RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KCNC1 (Homo sapiens)

Ensembl gene IDs: ENSG00000129159

Ensembl transcript IDs: ENST00000265969.8, ENST00000379472.4, ENST00000525802.1, ENST00000526029.1, ENST00000638366.1, ENST00000638825.1, ENST00000639325.2, ENST00000639495.1, ENST00000640153.1, ENST00000640318.2, ENST00000640909.2, ENST00000675775.1

Found 1452 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCCTCGGTGTGCCTGCCTGCCCCTCAGCGCCCTTGCCCGCCGCCCTaGCCACCCATCTGCAGGAGCGCGAGGCGGCCCGGACGATGCACG +
Preference number: 1 (lower is better)
Translates to: PSVCLPAPQRPCPPP*PPICRSARRPGRCT
Trigger: CGTGCATCGTCCGGGCCGCCTCGCGCTCCTGCAGATGGGTGGGCAGGGCGGCGGGCAAGGGCGCTGAGGGGCAGGCAGGCACACCGAGGG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638825.1
ENST00000675775.1
3UTR TCA 90 bp GAGCCCGGCCACCACCACCCCCTCCACCGGCCACCCACTGCTCACTaGCGTGGGACCCTGCAGCCCTGGACGCGGCACCACAAAGGACTG +
Preference number: 1 (lower is better)
Translates to: EPGHHHPLHRPPTAH*RGTLQPWTRHHKGL
Trigger: CAGTCCTTTGTGGTGCCGCGTCCAGGGCTGCAGGGTCCCACGTCAGTGAGCAGTGGGTGGCCGGTGGAGGGGGTGGTGGTGGCCGGGCTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR GCA 90 bp CCCGAAGGCTGGCAGCCCTCCGCCATGCAGCACCATGCGGGGAGTTaGGCACCGTGCCCCGGCTCAAAGGACCTCTGGGCAGGGCAGAGA +
Preference number: 1 (lower is better)
Translates to: PEGWQPSAMQHHAGS*APCPGSKDLWAGQR
Trigger: TCTCTGCCCTGCCCAGAGGTCCTTTGAGCCGGGGCACGGTGCGCAACTCCCCGCATGGTGCTGCATGGCGGAGGGCTGCCAGCCTTCGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638825.1
3UTR GCA 90 bp ATGGGACCCTCCCGAAGGCTGGCAGCCCTCCGCCATGCAGCACCATaGGGGGAGTTGCGCACCGTGCCCCGGCTCAAAGGACCTCTGGGC +
Preference number: 1 (lower is better)
Translates to: MGPSRRLAALRHAAP*GELRTVPRLKGPLG
Trigger: GCCCAGAGGTCCTTTGAGCCGGGGCACGGTGCGCAACTCCCCGCATGGTGCTGCATGGCGGAGGGCTGCCAGCCTTCGGGAGGGTCCCAT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638825.1
3UTR GCA 90 bp GGTGCCAAGGATGGGACCCTCCCGAAGGCTGGCAGCCCTCCGCCATaGAGCACCATGCGGGGAGTTGCGCACCGTGCCCCGGCTCAAAGG +
Preference number: 1 (lower is better)
Translates to: GAKDGTLPKAGSPPP*STMRGVAHRAPAQR
Trigger: CCTTTGAGCCGGGGCACGGTGCGCAACTCCCCGCATGGTGCTGCATGGCGGAGGGCTGCCAGCCTTCGGGAGGGTCCCATCCTTGGCACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638825.1
3UTR CCA 90 bp CGGCCACCACCACCCCCTCCACCGGCCACCCACTGCTCACTGACGTaGGACCCTGCAGCCCTGGACGCGGCACCACAAAGGACTGACCCA +
Preference number: 1 (lower is better)
Translates to: RPPPPPPPATHCSLT*DPAALDAAPQRTDP
Trigger: TGGGTCAGTCCTTTGTGGTGCCGCGTCCAGGGCTGCAGGGTCCCACGTCAGTGAGCAGTGGGTGGCCGGTGGAGGGGGTGGTGGTGGCCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR CCA 90 bp AGGCCCATCCATGGCCGGTGCCAAGGATGGGACCCTCCCGAAGGCTaGCAGCCCTCCGCCATGCAGCACCATGCGGGGAGTTGCGCACCG +
Preference number: 1 (lower is better)
Translates to: RPIHGRCQGWDPPEG*QPSAMQHHAGSCAP
Trigger: CGGTGCGCAACTCCCCGCATGGTGCTGCATGGCGGAGGGCTGCCAGCCTTCGGGAGGGTCCCATCCTTGGCACCGGCCATGGATGGGCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638825.1
3UTR CCA 90 bp GTGCCCGAGCGCGTAAAGGGCAGGCCCTCATCGGGAGTGAGGGCCTaGTCTATGTGGGGGCAGTCTTCGTTCGCCAGCGCGGCCTTCGCC +
Preference number: 1 (lower is better)
Translates to: VPERVKGRPSSGVRA*SMWGQSSFASAAFA
Trigger: GGCGAAGGCCGCGCTGGCGAACGAAGACTGCCCCCACATAGACCAGGCCCTCACTCCCGATGAGGGCCTGCCCTTTACGCGCTCGGGCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638366.1
3UTR CCA 90 bp CGCGTAAAGGGCAGGCCCTCATCGGGAGTGAGGGCCTGGTCTATGTaGGGGCAGTCTTCGTTCGCCAGCGCGGCCTTCGCCACCTCCCCA +
Preference number: 1 (lower is better)
Translates to: RVKGRPSSGVRAWSM*GQSSFASAAFATSP
Trigger: TGGGGAGGTGGCGAAGGCCGCGCTGGCGAACGAAGACTGCCCCCACATAGACCAGGCCCTCACTCCCGATGAGGGCCTGCCCTTTACGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638366.1
3UTR GCA 90 bp GTTAGCTCCCAGGGAGCCCAGGCGGGGGCTTCTCTGAGACCTCACTaGTGTTCTAGGTGCCATGGGCAGGAAGGGAGCCCGGCCACCACC +
Preference number: 1 (lower is better)
Translates to: VSSQGAQAGASLRPH*CSRCHGQEGSPATT
Trigger: GGTGGTGGCCGGGCTCCCTTCCTGCCCATGGCACCTAGAACAGCAGTGAGGTCTCAGAGAAGCCCCCGCCTGGGCTCCCTGGGAGCTAAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR GCA 90 bp CCTCTGTGGAGATGGTGCCGCCTGAGACCCTTCTCTGGCTCTGAATaGTGGGCCCCCGCCCACTGGTTCTGTCCACAAGCCCCCAGGCCC +
Preference number: 1 (lower is better)
Translates to: PLWRWCRLRPFSGSE*WAPAHWFCPQAPRP
Trigger: GGGCCTGGGGGCTTGTGGACAGAACCAGTGGGCGGGGGCCCAGCATTCAGAGCCAGAGAAGGGTCTCAGGCGGCACCATCTCCACAGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR CCA 90 bp TCTAGCAGGCTCTTGCCTGCTGAATTTGGCCGCCCAGCATCTCCCTaGGCCCCCAGGCTCCACACCTCCAGACTGAGTGCGGGGTCCGGG +
Preference number: 1 (lower is better)
Translates to: SSRLLPAEFGRPASP*APRLHTSRLSAGSG
Trigger: CCCGGACCCCGCACTCAGTCTGGAGGTGTGGAGCCTGGGGGCCCAGGGAGATGCTGGGCGGCCAAATTCAGCAGGCAAGAGCCTGCTAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR CCA 90 bp CTCAGGCTGAGCTCTTCTTGCCAGGCCCACATGGAAGCTGGGGCCTaGGCCAGCCCACGCGTTCCTCCTAGAGGCCCAGAGCCCTGTTGG +
Preference number: 1 (lower is better)
Translates to: LRLSSSCQAHMEAGA*ASPRVPPRGPEPCW
Trigger: CCAACAGGGCTCTGGGCCTCTAGGAGGAACGCGTGGGCTGGCCCAGGCCCCAGCTTCCATGTGGGCCTGGCAAGAAGAGCTCAGCCTGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR CCA 90 bp CTGTGGAGATGGTGCCGCCTGAGACCCTTCTCTGGCTCTGAATGCTaGGCCCCCGCCCACTGGTTCTGTCCACAAGCCCCCAGGCCCTGG +
Preference number: 1 (lower is better)
Translates to: LWRWCRLRPFSGSEC*APAHWFCPQAPRPW
Trigger: CCAGGGCCTGGGGGCTTGTGGACAGAACCAGTGGGCGGGGGCCCAGCATTCAGAGCCAGAGAAGGGTCTCAGGCGGCACCATCTCCACAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR CCA 90 bp CACACGTGTGCTCGCAGACACGCTGGTCCTGCCTCCCACTCTGGCTaGCCCAGTCTTCCATCCAAGGGTCTCCGGGCTGAGGGAGGAGGG +
Preference number: 1 (lower is better)
Translates to: HTCARRHAGPASHSG*PSLPSKGLRAEGGG
Trigger: CCCTCCTCCCTCAGCCCGGAGACCCTTGGATGGAAGACTGGGCCAGCCAGAGTGGGAGGCAGGACCAGCGTGTCTGCGAGCACACGTGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR CCA 90 bp GTCGCAAAGGGGAACATCAGGCCCATCCATGGCCGGTGCCAAGGATaGGACCCTCCCGAAGGCTGGCAGCCCTCCGCCATGCAGCACCAT +
Preference number: 1 (lower is better)
Translates to: VAKGNIRPIHGRCQG*DPPEGWQPSAMQHH
Trigger: ATGGTGCTGCATGGCGGAGGGCTGCCAGCCTTCGGGAGGGTCCCATCCTTGGCACCGGCCATGGATGGGCCTGATGTTCCCCTTTGCGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638825.1
3UTR TCA 90 bp CCACCGGGAAGTGAGTGCTTGGGAAGGGCTTGGGAGCACAGTTGGTaGCGGGGGAGGCAGGAGGGATCCAGGCATCCAAGCTCCAGAGGG +
Preference number: 1 (lower is better)
Translates to: PPGSECLGRAWEHSW*RGRQEGSRHPSSRG
Trigger: CCCTCTGGAGCTTGGATGCCTGGATCCCTCCTGCCTCCCCCGTCACCAACTGTGCTCCCAAGCCCTTCCCAAGCACTCACTTCCCGGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR GCA 90 bp ACCTCCTTACCCAGGGGCACCAGTGAGGTTCCTCTAGCAGGCTCTTaGCTGCTGAATTTGGCCGCCCAGCATCTCCCTGGGCCCCCAGGC +
Preference number: 1 (lower is better)
Translates to: TSLPRGTSEVPLAGS*LLNLAAQHLPGPPG
Trigger: GCCTGGGGGCCCAGGGAGATGCTGGGCGGCCAAATTCAGCAGGCAAGAGCCTGCTAGAGGAACCTCACTGGTGCCCCTGGGTAAGGAGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR CCA 90 bp GAATGGGCATGGCAGGACGGAGGAGGCATTGTGGGCTGTCCAGAGTaGGCGGTCTGGGCATCCGACTGCAGATGCAGGAGGGAGCCCCTT +
Preference number: 1 (lower is better)
Translates to: EWAWQDGGGIVGCPE*AVWASDCRCRREPL
Trigger: AAGGGGCTCCCTCCTGCATCTGCAGTCGGATGCCCAGACCGCCCACTCTGGACAGCCCACAATGCCTCCTCCGTCCTGCCATGCCCATTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR TCA 90 bp GACCCAGCCTGCTCACCCCGTTCAGCATGCATCCGTGTGCACGTGTaGGGCACTCCAAGACATGCACGAGCTGCCCAGCCAGTCTGCTGC +
Preference number: 1 (lower is better)
Translates to: DPACSPRSACIRVHV*GTPRHARAAQPVCC
Trigger: GCAGCAGACTGGCTGGGCAGCTCGTGCATGTCTTGGAGTGCCTCACACGTGCACACGGATGCATGCTGAACGGGGTGAGCAGGCTGGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638825.1
3UTR GCA 90 bp AAAAAGCCAGTCGCAAAGGGGAACATCAGGCCCATCCATGGCCGGTaGCAAGGATGGGACCCTCCCGAAGGCTGGCAGCCCTCCGCCATG +
Preference number: 1 (lower is better)
Translates to: KKPVAKGNIRPIHGR*QGWDPPEGWQPSAM
Trigger: CATGGCGGAGGGCTGCCAGCCTTCGGGAGGGTCCCATCCTTGGCACCGGCCATGGATGGGCCTGATGTTCCCCTTTGCGACTGGCTTTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638825.1
3UTR TCA 90 bp AAATCACACCCGCCCCCACTCTGTCCCAACACCGGGTCAGTAGCCTaGGTCAGAGACTCACACCGGACTCCTGCCCCACCAAGCAGAGCC +
Preference number: 1 (lower is better)
Translates to: KSHPPPLCPNTGSVA*VRDSHRTPAPPSRA
Trigger: GGCTCTGCTTGGTGGGGCAGGAGTCCGGTGTGAGTCTCTGACTCAGGCTACTGACCCGGTGTTGGGACAGAGTGGGGGCGGGTGTGATTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR TCA 90 bp CCTCGGGGGTCAGGATATCAGGACAGCACCAACACCACCGGGAAGTaGGTGCTTGGGAAGGGCTTGGGAGCACAGTTGGTGACGGGGGAG +
Preference number: 1 (lower is better)
Translates to: PRGSGYQDSTNTTGK*VLGKGLGAQLVTGE
Trigger: CTCCCCCGTCACCAACTGTGCTCCCAAGCCCTTCCCAAGCACTCACTTCCCGGTGGTGTTGGTGCTGTCCTGATATCCTGACCCCCGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR CCA 90 bp AACTGGGAAAAAGCCAGTCGCAAAGGGGAACATCAGGCCCATCCATaGCCGGTGCCAAGGATGGGACCCTCCCGAAGGCTGGCAGCCCTC +
Preference number: 1 (lower is better)
Translates to: NWEKASRKGEHQAHP*PVPRMGPSRRLAAL
Trigger: GAGGGCTGCCAGCCTTCGGGAGGGTCCCATCCTTGGCACCGGCCATGGATGGGCCTGATGTTCCCCTTTGCGACTGGCTTTTTCCCAGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638825.1
3UTR TCA 90 bp GAAGCAGAGACCAGCCTAGACCAGGTGGGCACAACTAAGCACCAGTaGCCAGAACCACGTTCCCTCGTCTCCGTGCGGGCTGCCTCTCCT +
Preference number: 1 (lower is better)
Translates to: EAETSLDQVGTTKHQ*PEPRSLVSVRAASP
Trigger: AGGAGAGGCAGCCCGCACGGAGACGAGGGAACGTGGTTCTGGTCACTGGTGCTTAGTTGTGCCCACCTGGTCTAGGCTGGTCTCTGCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638825.1
3UTR GCA 90 bp TCAGCTATGGAGACAGGCTCTGCCGGGGGTGAGAACCCTTGCACCTaGCTTTGCAAGGGACCCTCCTGCCCAGATCCCATGCACCATCTC +
Preference number: 1 (lower is better)
Translates to: SAMETGSAGGENPCT*LCKGPSCPDPMHHL
Trigger: GAGATGGTGCATGGGATCTGGGCAGGAGGGTCCCTTGCAAAGGCAGGTGCAAGGGTTCTCACCCCCGGCAGAGCCTGTCTCCATAGCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR GCA 90 bp CGCTTTCATCTAAGCTGCCCAGGGTGGTGGCCCCCTCTAGTCTTTTaGTCGGCAGCCGCTTCCATCGGGTCACCGGAAACTCCCACTCGA +
Preference number: 1 (lower is better)
Translates to: RFHLSCPGWWPPLVF*SAAASIGSPETPTR
Trigger: TCGAGTGGGAGTTTCCGGTGACCCGATGGAAGCGGCTGCCGAGCAAAAGACTAGAGGGGGCCACCACCCTGGGCAGCTTAGATGAAAGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR CCA 90 bp AGAGCACTGGGGATTCTTGACTGGCTGGCCCAGGGCACCTGTGCTTaGGGCAACACTCCTGAAAGATCCAGTGTCGGGGAGGATGCAGGG +
Preference number: 1 (lower is better)
Translates to: RALGILDWLAQGTCA*GNTPERSSVGEDAG
Trigger: CCCTGCATCCTCCCCGACACTGGATCTTTCAGGAGTGTTGCCCCAAGCACAGGTGCCCTGGGCCAGCCAGTCAAGAATCCCCAGTGCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR CCA 90 bp GACAAGACACATGCGAATGGGCATGGCAGGACGGAGGAGGCATTGTaGGCTGTCCAGAGTGGGCGGTCTGGGCATCCGACTGCAGATGCA +
Preference number: 1 (lower is better)
Translates to: DKTHANGHGRTEEAL*AVQSGRSGHPTADA
Trigger: TGCATCTGCAGTCGGATGCCCAGACCGCCCACTCTGGACAGCCCACAATGCCTCCTCCGTCCTGCCATGCCCATTCGCATGTGTCTTGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR TCA 90 bp CATCACGAGACCAACCGCGTCAACCTCCTTACCCAGGGGCACCAGTaGGGTTCCTCTAGCAGGCTCTTGCCTGCTGAATTTGGCCGCCCA +
Preference number: 1 (lower is better)
Translates to: HHETNRVNLLTQGHQ*GSSSRLLPAEFGRP
Trigger: TGGGCGGCCAAATTCAGCAGGCAAGAGCCTGCTAGAGGAACCTCACTGGTGCCCCTGGGTAAGGAGGTTGACGCGGTTGGTCTCGTGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR TCA 90 bp GCACACAGGAGGAGACCAGATTGTCCCTGGGACAGACACACAGACTaGGGCTTCAGACGAGACCAAGAGGTGGAGGTGAGGGGCAGGTGC +
Preference number: 1 (lower is better)
Translates to: AHRRRPDCPWDRHTD*GFRRDQEVEVRGRC
Trigger: GCACCTGCCCCTCACCTCCACCTCTTGGTCTCGTCTGAAGCCTCAGTCTGTGTGTCTGTCCCAGGGACAATCTGGTCTCCTCCTGTGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR TCA 90 bp ACTGACGTGGGACCCTGCAGCCCTGGACGCGGCACCACAAAGGACTaGCCCACATCACAGGAGCGGAGATGGACAAGACACATGCGAATG +
Preference number: 1 (lower is better)
Translates to: TDVGPCSPGRGTTKD*PTSQERRWTRHMRM
Trigger: CATTCGCATGTGTCTTGTCCATCTCCGCTCCTGTGATGTGGGTCAGTCCTTTGTGGTGCCGCGTCCAGGGCTGCAGGGTCCCACGTCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR TCA 90 bp GAGGCAGGCAGATTCTTCTCCAGCTGGCTTGGTTTGCCCATGCACTaGGCCAGCCTAGCACGCCTCTTTCTCTCCCTCCTGGGGGAATGG +
Preference number: 1 (lower is better)
Translates to: EAGRFFSSWLGLPMH*ASLARLFLSLLGEW
Trigger: CCATTCCCCCAGGAGGGAGAGAAAGAGGCGTGCTAGGCTGGCTCAGTGCATGGGCAAACCAAGCCAGCTGGAGAAGAATCTGCCTGCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638825.1
3UTR GCA 90 bp CCGTTCAGCATGCATCCGTGTGCACGTGTGAGGCACTCCAAGACATaGACGAGCTGCCCAGCCAGTCTGCTGCACCAAGAAAGGTGCCCT +
Preference number: 1 (lower is better)
Translates to: PFSMHPCARVRHSKT*TSCPASLLHQERCP
Trigger: AGGGCACCTTTCTTGGTGCAGCAGACTGGCTGGGCAGCTCGTGCATGTCTTGGAGTGCCTCACACGTGCACACGGATGCATGCTGAACGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638825.1
3UTR GCA 90 bp TGGGTATCTCCTGTGGACAGTGCTTACCGCTGGACTCCCAGCCACTaGAGGGAGCAGCGCTGTTCCTGTCCCACACTCCCTTCTGTGCTT +
Preference number: 1 (lower is better)
Translates to: WVSPVDSAYRWTPSH*REQRCSCPTLPSVL
Trigger: AAGCACAGAAGGGAGTGTGGGACAGGAACAGCGCTGCTCCCTGCAGTGGCTGGGAGTCCAGCGGTAAGCACTGTCCACAGGAGATACCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638825.1
3UTR CCA 90 bp CTAGTACAATGCCTGGGCCACTCGGACTCGTCCGGCAAACCTGCATaGCGTGAATTTACTCTGTCCGAGGGTGAGGAGGGGCTGCAGGTC +
Preference number: 1 (lower is better)
Translates to: LVQCLGHSDSSGKPA*REFTLSEGEEGLQV
Trigger: GACCTGCAGCCCCTCCTCACCCTCGGACAGAGTAAATTCACGCCATGCAGGTTTGCCGGACGAGTCCGAGTGGCCCAGGCATTGTACTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265969.8
ENST00000638366.1
ENST00000638825.1
ENST00000640909.2
3UTR CCA 90 bp AGGAATCTGGGCCTGCCTGGAGAGCACTGGGGATTCTTGACTGGCTaGCCCAGGGCACCTGTGCTTGGGGCAACACTCCTGAAAGATCCA +
Preference number: 1 (lower is better)
Translates to: RNLGLPGEHWGFLTG*PRAPVLGATLLKDP
Trigger: TGGATCTTTCAGGAGTGTTGCCCCAAGCACAGGTGCCCTGGGCCAGCCAGTCAAGAATCCCCAGTGCTCTCCAGGCAGGCCCAGATTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR CCA 90 bp AACCCGAGGCTGGGCCCTCAGTCAGCACAGCTGGCTTTTCTGCCCTaGTCTCCAGGCACCGCCAAAGTACTTACTGTTCACACCAGCTGC +
Preference number: 1 (lower is better)
Translates to: NPRLGPQSAQLAFLP*SPGTAKVLTVHTSC
Trigger: GCAGCTGGTGTGAACAGTAAGTACTTTGGCGGTGCCTGGAGACCAGGGCAGAAAAGCCAGCTGTGCTGACTGAGGGCCCAGCCTCGGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR CCA 90 bp GCCTCCCAAAGACTCTGGCACCTAAGCCTCGGTGGGACTGAGGAATaGGTATCTCCTGTGGACAGTGCTTACCGCTGGACTCCCAGCCAC +
Preference number: 1 (lower is better)
Translates to: ASQRLWHLSLGGTEE*VSPVDSAYRWTPSH
Trigger: GTGGCTGGGAGTCCAGCGGTAAGCACTGTCCACAGGAGATACCCATTCCTCAGTCCCACCGAGGCTTAGGTGCCAGAGTCTTTGGGAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638825.1
3UTR TCA 90 bp TTCCTCAGCCACAGAGACTGTCCAAGCCAGAACTGTCTGGGCCCCTaGAACCTGGGACCAGGGCAAAGTGGCTCTCAAAAGCAGGGCTGG +
Preference number: 1 (lower is better)
Translates to: FLSHRDCPSQNCLGP*NLGPGQSGSQKQGW
Trigger: CCAGCCCTGCTTTTGAGAGCCACTTTGCCCTGGTCCCAGGTTTCAGGGGCCCAGACAGTTCTGGCTTGGACAGTCTCTGTGGCTGAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR TCA 90 bp GAGGCAGGAGGGATCCAGGCATCCAAGCTCCAGAGGGCAAGCTTGTaGGGGCCCCAAATACTTCCTCAGCCACAGAGACTGTCCAAGCCA +
Preference number: 1 (lower is better)
Translates to: EAGGIQASKLQRASL*GPQILPQPQRLSKP
Trigger: TGGCTTGGACAGTCTCTGTGGCTGAGGAAGTATTTGGGGCCCTCACAAGCTTGCCCTCTGGAGCTTGGATGCCTGGATCCCTCCTGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR GCA 90 bp ATGCATCCGTGTGCACGTGTGAGGCACTCCAAGACATGCACGAGCTaGCCAGCCAGTCTGCTGCACCAAGAAAGGTGCCCTCTGCCTTCT +
Preference number: 1 (lower is better)
Translates to: MHPCARVRHSKTCTS*PASLLHQERCPLPS
Trigger: AGAAGGCAGAGGGCACCTTTCTTGGTGCAGCAGACTGGCTGGGCAGCTCGTGCATGTCTTGGAGTGCCTCACACGTGCACACGGATGCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638825.1
3UTR CCA 90 bp TCGAGCTGGGCAGCCCGAAATCAGGGCAGGAATTCTACTCAGCTATaGAGACAGGCTCTGCCGGGGGTGAGAACCCTTGCACCTGCCTTT +
Preference number: 1 (lower is better)
Translates to: SSWAARNQGRNSTQL*RQALPGVRTLAPAF
Trigger: AAAGGCAGGTGCAAGGGTTCTCACCCCCGGCAGAGCCTGTCTCCATAGCTGAGTAGAATTCCTGCCCTGATTTCGGGCTGCCCAGCTCGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR CCA 90 bp CTTGTCACGGAGGGCTACAGGCGTCTCCTGGGAAGGACCTCGAGCTaGGCAGCCCGAAATCAGGGCAGGAATTCTACTCAGCTATGGAGA +
Preference number: 1 (lower is better)
Translates to: LVTEGYRRLLGRTSS*AARNQGRNSTQLWR
Trigger: TCTCCATAGCTGAGTAGAATTCCTGCCCTGATTTCGGGCTGCCCAGCTCGAGGTCCTTCCCAGGAGACGCCTGTAGCCCTCCGTGACAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR TCA 90 bp CAGGCACCTACAGAAATCCCAGGAAGGGAAGGGTATGCGGCAGGGTaGAAGGACCGGGAAACCCCCATGGGCAAAGAAATGGGCCTTGAG +
Preference number: 1 (lower is better)
Translates to: QAPTEIPGREGYAAG*KDRETPMGKEMGLE
Trigger: CTCAAGGCCCATTTCTTTGCCCATGGGGGTTTCCCGGTCCTTTCACCCTGCCGCATACCCTTCCCTTCCTGGGATTTCTGTAGGTGCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR TCA 90 bp CCTCCTCAATCAGGGGAGAGGAGAGATCACTTTGCCTTTGGGACTTaGCCTGCCATCTGCAAGAGCAGCCTGGGGGAGTCAAGGCTCCTC +
Preference number: 1 (lower is better)
Translates to: PPQSGERRDHFAFGT*PAICKSSLGESRLL
Trigger: GAGGAGCCTTGACTCCCCCAGGCTGCTCTTGCAGATGGCAGGTCAAGTCCCAAAGGCAAAGTGATCTCTCCTCTCCCCTGATTGAGGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000638825.1
ENST00000675775.1
3UTR GCA 90 bp AACCTGCATGGCGTGAATTTACTCTGTCCGAGGGTGAGGAGGGGCTaGAGGTCCACCCAGATGCTTAATAGCCACCAGTGTCCTCGGCCA +
Preference number: 1 (lower is better)
Translates to: NLHGVNLLCPRVRRG*RSTQMLNSHQCPRP
Trigger: TGGCCGAGGACACTGGTGGCTATTAAGCATCTGGGTGGACCTGCAGCCCCTCCTCACCCTCGGACAGAGTAAATTCACGCCATGCAGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265969.8
ENST00000638366.1
ENST00000638825.1
ENST00000640909.2
3UTR GCA 90 bp CACGGGAAAGTGGTTGTACACTGGTTGGGATGTCTATATTGCTGCTaGAGTCCCTACCGCTGGAAACGGGGAGAACCCTCGGTGGGAGGC +
Preference number: 1 (lower is better)
Translates to: HGKVVVHWLGCLYCC*SPYRWKRGEPSVGG
Trigger: GCCTCCCACCGAGGGTTCTCCCCGTTTCCAGCGGTAGGGACTGCAGCAGCAATATAGACATCCCAACCAGTGTACAACCACTTTCCCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR GCA 90 bp CAAAGGACTGACCCACATCACAGGAGCGGAGATGGACAAGACACATaGGAATGGGCATGGCAGGACGGAGGAGGCATTGTGGGCTGTCCA +
Preference number: 1 (lower is better)
Translates to: QRTDPHHRSGDGQDT*EWAWQDGGGIVGCP
Trigger: TGGACAGCCCACAATGCCTCCTCCGTCCTGCCATGCCCATTCGCATGTGTCTTGTCCATCTCCGCTCCTGTGATGTGGGTCAGTCCTTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR CCA 90 bp AGGCCCCCACTAGACCCACAGGCCTGCAGTGATGAAATGGCAGCATaGGCAGCGTCTCAGAGATGGTTTCCAGGCTTGAAATGGGCTGAG +
Preference number: 1 (lower is better)
Translates to: RPPLDPQACSDEMAA*AASQRWFPGLKWAE
Trigger: CTCAGCCCATTTCAAGCCTGGAAACCATCTCTGAGACGCTGCCCATGCTGCCATTTCATCACTGCAGGCCTGTGGGTCTAGTGGGGGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR CCA 90 bp CCACTGCCCTCCTCAATCAGGGGAGAGGAGAGATCACTTTGCCTTTaGGACTTGACCTGCCATCTGCAAGAGCAGCCTGGGGGAGTCAAG +
Preference number: 1 (lower is better)
Translates to: PLPSSIRGEERSLCL*DLTCHLQEQPGGVK
Trigger: CTTGACTCCCCCAGGCTGCTCTTGCAGATGGCAGGTCAAGTCCCAAAGGCAAAGTGATCTCTCCTCTCCCCTGATTGAGGAGGGCAGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000638825.1
ENST00000675775.1
3UTR CCA 90 bp TGGCTCAGAATTAGCCTGAGAAAAACAAGTCCTCGGCGGCTGTCGTaGCTCCATGAGAGCGCGGGCCGAATGGATGTAGGTGGGGACACT +
Preference number: 1 (lower is better)
Translates to: WLRISLRKTSPRRLS*LHESAGRMDVGGDT
Trigger: AGTGTCCCCACCTACATCCATTCGGCCCGCGCTCTCATGGAGCCACGACAGCCGCCGAGGACTTGTTTTTCTCAGGCTAATTCTGAGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638825.1
3UTR CCA 90 bp AGAACAGCCGCATGCAGAGGCAGGCAGATTCTTCTCCAGCTGGCTTaGTTTGCCCATGCACTGAGCCAGCCTAGCACGCCTCTTTCTCTC +
Preference number: 1 (lower is better)
Translates to: RTAACRGRQILLQLA*FAHALSQPSTPLSL
Trigger: GAGAGAAAGAGGCGTGCTAGGCTGGCTCAGTGCATGGGCAAACCAAGCCAGCTGGAGAAGAATCTGCCTGCCTCTGCATGCGGCTGTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638825.1
3UTR TCA 90 bp AGCCAGCCTAGCACGCCTCTTTCTCTCCCTCCTGGGGGAATGGGATaGGTCCCTACTTCTGCTCTGCACATTGACTCACACACCTGCATG +
Preference number: 1 (lower is better)
Translates to: SQPSTPLSLPPGGMG*VPTSALHIDSHTCM
Trigger: CATGCAGGTGTGTGAGTCAATGTGCAGAGCAGAAGTAGGGACTCATCCCATTCCCCCAGGAGGGAGAGAAAGAGGCGTGCTAGGCTGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638825.1
3UTR GCA 90 bp TCAATCAGGGGAGAGGAGAGATCACTTTGCCTTTGGGACTTGACCTaGCATCTGCAAGAGCAGCCTGGGGGAGTCAAGGCTCCTCCTGCA +
Preference number: 1 (lower is better)
Translates to: SIRGEERSLCLWDLT*HLQEQPGGVKAPPA
Trigger: TGCAGGAGGAGCCTTGACTCCCCCAGGCTGCTCTTGCAGATGGCAGGTCAAGTCCCAAAGGCAAAGTGATCTCTCCTCTCCCCTGATTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000638825.1
ENST00000675775.1
3UTR GCA 90 bp ACGAGAGCTTACTGGGCAGGGCACAGACACTGGGAACCGTCTACCTaGTTTTCCCCTCACTCCTCGGGCATTCTGCTTCTGGGCATTCTA +
Preference number: 1 (lower is better)
Translates to: TRAYWAGHRHWEPST*FSPHSSGILLLGIL
Trigger: TAGAATGCCCAGAAGCAGAATGCCCGAGGAGTGAGGGGAAAAGCAGGTAGACGGTTCCCAGTGTCTGTGCCCTGCCCAGTAAGCTCTCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638825.1
3UTR CCA 90 bp GTACACTGGTTGGGATGTCTATATTGCTGCTGCAGTCCCTACCGCTaGAAACGGGGAGAACCCTCGGTGGGAGGCTGTTGCTGGTCTGTA +
Preference number: 1 (lower is better)
Translates to: VHWLGCLYCCCSPYR*KRGEPSVGGCCWSV
Trigger: TACAGACCAGCAACAGCCTCCCACCGAGGGTTCTCCCCGTTTCCAGCGGTAGGGACTGCAGCAGCAATATAGACATCCCAACCAGTGTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR TCA 90 bp CATAGGCTGCACCAACTGTTGCTTTCAAAAACCCAGCTCCTCTTCTaGCCCAGCCTGCTCACCCCGTTCAGCATGCATCCGTGTGCACGT +
Preference number: 1 (lower is better)
Translates to: HRLHQLLLSKTQLLF*PSLLTPFSMHPCAR
Trigger: ACGTGCACACGGATGCATGCTGAACGGGGTGAGCAGGCTGGGTCAGAAGAGGAGCTGGGTTTTTGAAAGCAACAGTTGGTGCAGCCTATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638825.1
3UTR GCA 90 bp CCTAGTGGTAGAAATGGTAAGTCTTGGGTATTGACTGAGTCAGCTTaGACTAGGGAGGCCAGAGCACAGGGGAGCCAGCCATGGGCAGCA +
Preference number: 1 (lower is better)
Translates to: PSGRNGKSWVLTESA*TREARAQGSQPWAA
Trigger: TGCTGCCCATGGCTGGCTCCCCTGTGCTCTGGCCTCCCTAGTGCAAGCTGACTCAGTCAATACCCAAGACTTACCATTTCTACCACTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
3UTR GCA 90 bp AGTGACCATTTGGCCGTAGAAAAAGCTACGTCCGTCCTAGTACAATaGCTGGGCCACTCGGACTCGTCCGGCAAACCTGCATGGCGTGAA +
Preference number: 1 (lower is better)
Translates to: SDHLAVEKATSVLVQ*LGHSDSSGKPAWRE
Trigger: TTCACGCCATGCAGGTTTGCCGGACGAGTCCGAGTGGCCCAGGCATTGTACTAGGACGGACGTAGCTTTTTCTACGGCCAAATGGTCACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000640909.2
3UTR CCA 90 bp AATCCAAAGCAGAGAGCTCGGAGCTGTTTCAGCCTCGGAGACCCCTaGCCATGTTCCTCTCAGGCACCTACAGAAATCCCAGGAAGGGAA +
Preference number: 1 (lower is better)
Translates to: NPKQRARSCFSLGDP*PCSSQAPTEIPGRE
Trigger: TTCCCTTCCTGGGATTTCTGTAGGTGCCTGAGAGGAACATGGCCAGGGGTCTCCGAGGCTGAAACAGCTCCGAGCTCTCTGCTTTGGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR CCA 90 bp CCAAATACTTCCTCAGCCACAGAGACTGTCCAAGCCAGAACTGTCTaGGCCCCTGAAACCTGGGACCAGGGCAAAGTGGCTCTCAAAAGC +
Preference number: 1 (lower is better)
Translates to: PNTSSATETVQARTV*APETWDQGKVALKS
Trigger: GCTTTTGAGAGCCACTTTGCCCTGGTCCCAGGTTTCAGGGGCCCAGACAGTTCTGGCTTGGACAGTCTCTGTGGCTGAGGAAGTATTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR CCA 90 bp CCATGCCAAGAACACGGATCTTGTGTAGCTAAGTTCACAGGGTCCTaGCCCACTCCACTGCCCTCCTCAATCAGGGGAGAGGAGAGATCA +
Preference number: 1 (lower is better)
Translates to: PCQEHGSCVAKFTGS*PTPLPSSIRGEERS
Trigger: TGATCTCTCCTCTCCCCTGATTGAGGAGGGCAGTGGAGTGGGCCAGGACCCTGTGAACTTAGCTACACAAGATCCGTGTTCTTGGCATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638825.1
ENST00000675775.1
3UTR GCA 90 bp AGTTACCATTTGGCCGTAGAAAAAGCTACGTCCGTCCTAGTACAATaGCTGGGCCACTCGGACTCGTCCGGCAAACCTGCATGGCGTGAA +
Preference number: 1 (lower is better)
Translates to: SYHLAVEKATSVLVQ*LGHSDSSGKPAWRE
Trigger: TTCACGCCATGCAGGTTTGCCGGACGAGTCCGAGTGGCCCAGGCATTGTACTAGGACGGACGTAGCTTTTTCTACGGCCAAATGGTAACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265969.8
ENST00000638366.1
ENST00000638825.1
3UTR GCA 90 bp ATTCACGGGAAAGTGGTTGTACACTGGTTGGGATGTCTATATTGCTaGTGCAGTCCCTACCGCTGGAAACGGGGAGAACCCTCGGTGGGA +
Preference number: 1 (lower is better)
Translates to: IHGKVVVHWLGCLYC*CSPYRWKRGEPSVG
Trigger: TCCCACCGAGGGTTCTCCCCGTTTCCAGCGGTAGGGACTGCAGCAGCAATATAGACATCCCAACCAGTGTACAACCACTTTCCCGTGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR GCA 90 bp ATGTTCCTCTCAGGCACCTACAGAAATCCCAGGAAGGGAAGGGTATaGGGCAGGGTGAAAGGACCGGGAAACCCCCATGGGCAAAGAAAT +
Preference number: 1 (lower is better)
Translates to: MFLSGTYRNPRKGRV*GRVKGPGNPHGQRN
Trigger: ATTTCTTTGCCCATGGGGGTTTCCCGGTCCTTTCACCCTGCCGCATACCCTTCCCTTCCTGGGATTTCTGTAGGTGCCTGAGAGGAACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR CCA 90 bp CCACCCAGATGCTTAATAGCCACCAGTGTCCTCGGCCAAGCCGCCTaGTCAAGTCACTCTCACAGCCTCTGTCGGCATATACTTAGCAAT +
Preference number: 1 (lower is better)
Translates to: PPRCLIATSVLGQAA*SSHSHSLCRHILSN
Trigger: ATTGCTAAGTATATGCCGACAGAGGCTGTGAGAGTGACTTGACCAGGCGGCTTGGCCGAGGACACTGGTGGCTATTAAGCATCTGGGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638366.1
ENST00000638825.1
3UTR CCA 90 bp TCTAACATTCAAGATGATGGAGACAGAAAGCCCACGAGAGCTTACTaGGCAGGGCACAGACACTGGGAACCGTCTACCTGCTTTTCCCCT +
Preference number: 1 (lower is better)
Translates to: SNIQDDGDRKPTRAY*AGHRHWEPSTCFSP
Trigger: AGGGGAAAAGCAGGTAGACGGTTCCCAGTGTCTGTGCCCTGCCCAGTAAGCTCTCGTGGGCTTTCTGTCTCCATCATCTTGAATGTTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638825.1
3UTR TCA 90 bp AATATAAGAGAGGGCCTAGTGGTAGAAATGGTAAGTCTTGGGTATTaGCTGAGTCAGCTTGCACTAGGGAGGCCAGAGCACAGGGGAGCC +
Preference number: 1 (lower is better)
Translates to: NIREGLVVEMVSLGY*LSQLALGRPEHRGA
Trigger: GGCTCCCCTGTGCTCTGGCCTCCCTAGTGCAAGCTGACTCAGTCAATACCCAAGACTTACCATTTCTACCACTAGGCCCTCTCTTATATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
3UTR GCA 90 bp CATCCGCTGGGTCACAAGCATGCCAAACGGGGAAGAAGGCAGCCGTaGGAGTTTCCACAATTCTATTTGGAGCAAAGTTCTCAGTTTCCA +
Preference number: 1 (lower is better)
Translates to: HPLGHKHAKRGRRQP*EFPQFYLEQSSQFP
Trigger: TGGAAACTGAGAACTTTGCTCCAAATAGAATTGTGGAAACTCGCACGGCTGCCTTCTTCCCCGTTTGGCATGCTTGTGACCCAGCGGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000638825.1
3UTR GCA 90 bp ATTGCATACAATGCCAGGTTGTGCCTTAGTAAAGGTGGAGGAGGCTaGTCCTCCCGTGGTCCTGATCTTTTGGTGCTCTACATCCTGGTT +
Preference number: 1 (lower is better)
Translates to: IAYNARLCLSKGGGG*SSRGPDLLVLYILV
Trigger: AACCAGGATGTAGAGCACCAAAAGATCAGGACCACGGGAGGAGCAGCCTCCTCCACCTTTACTAAGGCACAACCTGGCATTGTATGCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265969.8
3UTR TCA 90 bp ACCACCTTCTCTTGGCAAGTTCTCGATCTGCCACTAGCAATATTCTaGCTGCAAGGACAATGGCCTTACCCCCAAGCCCTGAAGACATCT +
Preference number: 1 (lower is better)
Translates to: TTFSWQVLDLPLAIF*LQGQWPYPQALKTS
Trigger: AGATGTCTTCAGGGCTTGGGGGTAAGGCCATTGTCCTTGCAGTCAGAATATTGCTAGTGGCAGATCGAGAACTTGCCAAGAGAAGGTGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638825.1
3UTR CCA 90 bp CTTCATAGACTAAATGCCACCTGTCACGTCAACCTCCTGCTCACCTaGCACTCCTTCTTACTCAGTGCTGTCATTCTTCTCTGGGTCATC +
Preference number: 1 (lower is better)
Translates to: LHRLNATCHVNLLLT*HSFLLSAVILLWVI
Trigger: GATGACCCAGAGAAGAATGACAGCACTGAGTAAGAAGGAGTGCCAGGTGAGCAGGAGGTTGACGTGACAGGTGGCATTTAGTCTATGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR GCA 90 bp CCCTCTGGCTTGTGGATTGATTATCTTTCAAGGATGCCTCTTCCATaGCAAGAACACGGATCTTGTGTAGCTAAGTTCACAGGGTCCTGG +
Preference number: 1 (lower is better)
Translates to: PSGLWIDYLSRMPLP*QEHGSCVAKFTGSW
Trigger: CCAGGACCCTGTGAACTTAGCTACACAAGATCCGTGTTCTTGGCATGGAAGAGGCATCCTTGAAAGATAATCAATCCACAAGCCAGAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638825.1
ENST00000675775.1
3UTR CCA 90 bp GGGAATCAATATAAGAGAGGGCCTAGTGGTAGAAATGGTAAGTCTTaGGTATTGACTGAGTCAGCTTGCACTAGGGAGGCCAGAGCACAG +
Preference number: 1 (lower is better)
Translates to: GNQYKRGPSGRNGKS*VLTESACTREARAQ
Trigger: CTGTGCTCTGGCCTCCCTAGTGCAAGCTGACTCAGTCAATACCCAAGACTTACCATTTCTACCACTAGGCCCTCTCTTATATTGATTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
3UTR CCA 90 bp ACTATGGCAGAGAGGGTAACTTGCTCAAGGAGGAGAACCTTGTCCTaGGTACTCTGCAGCTTAAGGACTTGGGTATCTAAAGACACAGGT +
Preference number: 1 (lower is better)
Translates to: TMAERVTCSRRRTLS*VLCSLRTWVSKDTG
Trigger: ACCTGTGTCTTTAGATACCCAAGTCCTTAAGCTGCAGAGTACCCAGGACAAGGTTCTCCTCCTTGAGCAAGTTACCCTCTCTGCCATAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
3UTR GCA 90 bp AAATCGTGTCTCAGAGGGAGAACAGTAGTTCCCCTTATCTGCAGTTaGACTTTCTACAGTTTCTGTTACCTGCAGTCAGCCACAGTCCGA +
Preference number: 1 (lower is better)
Translates to: KSCLRGRTVVPLICS*TFYSFCYLQSATVR
Trigger: TCGGACTGTGGCTGACTGCAGGTAACAGAAACTGTAGAAAGTGCAACTGCAGATAAGGGGAACTACTGTTCTCCCTCTGAGACACGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
3UTR GCA 90 bp GTGGGGATGTGGTTTTCAGTATCTTGCATTACAGGACCACATCTGTaGCCACACTGCAGAATAACCTTTGTCCATTCTAGAGAGAGCCTG +
Preference number: 1 (lower is better)
Translates to: VGMWFSVSCITGPHL*PHCRITFVHSRESL
Trigger: CAGGCTCTCTCTAGAATGGACAAAGGTTATTCTGCAGTGTGGGCACAGATGTGGTCCTGTAATGCAAGATACTGAAAACCACATCCCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
3UTR CCA 90 bp CTGTGCTTCTGGCACCACAGTAAAGAGACTGTCTTGTCTGCTCTTTaGGGCCACACCAATCAGTCTAACATTCAAGATGATGGAGACAGA +
Preference number: 1 (lower is better)
Translates to: LCFWHHSKETVLSAL*GHTNQSNIQDDGDR
Trigger: TCTGTCTCCATCATCTTGAATGTTAGACTGATTGGTGTGGCCCCAAAGAGCAGACAAGACAGTCTCTTTACTGTGGTGCCAGAAGCACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638825.1
3UTR CCA 90 bp ATTGCAAAGGTTGAGTCCTCAATAGGAACTCCATACGTGGATACATaGGAAGGCTCTGTCTCCCTGAGGAAAAACCAGATGGAGTTGTCC +
Preference number: 1 (lower is better)
Translates to: IAKVESSIGTPYVDT*EGSVSLRKNQMELS
Trigger: GGACAACTCCATCTGGTTTTTCCTCAGGGAGACAGAGCCTTCCCATGTATCCACGTATGGAGTTCCTATTGAGGACTCAACCTTTGCAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000640909.2
3UTR GCA 90 bp TGCTTCAAATCGTGTCTCAGAGGGAGAACAGTAGTTCCCCTTATCTaGAGTTGCACTTTCTACAGTTTCTGTTACCTGCAGTCAGCCACA +
Preference number: 1 (lower is better)
Translates to: CFKSCLRGRTVVPLI*SCTFYSFCYLQSAT
Trigger: TGTGGCTGACTGCAGGTAACAGAAACTGTAGAAAGTGCAACTGCAGATAAGGGGAACTACTGTTCTCCCTCTGAGACACGATTTGAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
3UTR TCA 90 bp ATTTGTTATGAAAGTTGGTCACACTGGATCTACACACCGATAAGATaGGAGAATCAACCTAGACTAGCTGCTGTCAGGGGTCTTGGGGAG +
Preference number: 1 (lower is better)
Translates to: ICYESWSHWIYTPIR*ENQPRLAAVRGLGE
Trigger: CTCCCCAAGACCCCTGACAGCAGCTAGTCTAGGTTGATTCTCTCATCTTATCGGTGTGTAGATCCAGTGTGACCAACTTTCATAACAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000638825.1
3UTR TCA 90 bp CTTCTTACTCAGTGCTGTCATTCTTCTCTGGGTCATCTGTTCCTTTaGAATCCCTGTGTCCACAGAATAAGTCGATGGTATTCCATGGGT +
Preference number: 1 (lower is better)
Translates to: LLTQCCHSSLGHLFL*NPCVHRISRWYSMG
Trigger: ACCCATGGAATACCATCGACTTATTCTGTGGACACAGGGATTTCAAAGGAACAGATGACCCAGAGAAGAATGACAGCACTGAGTAAGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR GCA 90 bp TGGTTTTCAGTATCTTGCATTACAGGACCACATCTGTGCCCACACTaGAGAATAACCTTTGTCCATTCTAGAGAGAGCCTGCAAAGTACA +
Preference number: 1 (lower is better)
Translates to: WFSVSCITGPHLCPH*RITFVHSRESLQST
Trigger: TGTACTTTGCAGGCTCTCTCTAGAATGGACAAAGGTTATTCTGCAGTGTGGGCACAGATGTGGTCCTGTAATGCAAGATACTGAAAACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
3UTR TCA 90 bp AACCGGCACAAGTCATGCAACAAAACGAGGAGAGAGAGAGAAACATaGTTAGTGGAGAGAGAGAGAAAGAGAGAAAATGTGAACAACACG +
Preference number: 1 (lower is better)
Translates to: NRHKSCNKTRRERET*LVERERKRENVNNT
Trigger: CGTGTTGTTCACATTTTCTCTCTTTCTCTCTCTCTCCACTAATCATGTTTCTCTCTCTCTCCTCGTTTTGTTGCATGACTTGTGCCGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR GCA 90 bp TGGTATACTTGGGAATGTTGGGTTTATAGAATTAAAGTGGGTTGGTaGTGGAAAGGATCTCAGAAGCCAACTGTTCCCAATCTTCATCTG +
Preference number: 1 (lower is better)
Translates to: WYTWECWVYRIKVGW*WKGSQKPTVPNLHL
Trigger: CAGATGAAGATTGGGAACAGTTGGCTTCTGAGATCCTTTCCAGCACCAACCCACTTTAATTCTATAAACCCAACATTCCCAAGTATACCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
3UTR GCA 90 bp TGTTGGGAAAATACTATATTTATTCGAGATGCAGAAGTGTGTCTCTaGAAACCTCCGACTGCTTCAGGAAAACAAATCTGCTTTAGACTA +
Preference number: 1 (lower is better)
Translates to: CWENTIFIRDAEVCL*KPPTASGKQICFRL
Trigger: TAGTCTAAAGCAGATTTGTTTTCCTGAAGCAGTCGGAGGTTTGCAGAGACACACTTCTGCATCTCGAATAAATATAGTATTTTCCCAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265969.8
3UTR CCA 90 bp ATTTTAGAATCAGACCAAAGCCAAGCTACTGTCCTCTGTTTCTGTTaGGAAAATACTATATTTATTCGAGATGCAGAAGTGTGTCTCTGC +
Preference number: 1 (lower is better)
Translates to: ILESDQSQATVLCFC*ENTIFIRDAEVCLC
Trigger: GCAGAGACACACTTCTGCATCTCGAATAAATATAGTATTTTCCCAACAGAAACAGAGGACAGTAGCTTGGCTTTGGTCTGATTCTAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265969.8
3UTR TCA 90 bp TTAATGGAACACTTGGAAAATCCATACGGTGGTGATTATTTACTATaGACAATTTGTTATGAAAGTTGGTCACACTGGATCTACACACCG +
Preference number: 1 (lower is better)
Translates to: LMEHLENPYGGDYLL*TICYESWSHWIYTP
Trigger: CGGTGTGTAGATCCAGTGTGACCAACTTTCATAACAAATTGTTCATAGTAAATAATCACCACCGTATGGATTTTCCAAGTGTTCCATTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265969.8
3UTR CAA 90 bp TCCCGAAGGCTGGCAGCCCTCCGCCATGCAGCACCATGCGGGGAGTaGCGCACCGTGCCCCGGCTCAAAGGACCTCTGGGCAGGGCAGAG +
Preference number: 2 (lower is better)
Translates to: SRRLAALRHAAPCGE*RTVPRLKGPLGRAE
Trigger: CTCTGCCCTGCCCAGAGGTCCTTTGAGCCGGGGCACGGTGCGCAACTCCCCGCATGGTGCTGCATGGCGGAGGGCTGCCAGCCTTCGGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638825.1
3UTR-3UTR TCA 90 bp ATAGCCACCAGTGTCCTCGGCCAAGCCGCCTGGTCAAGTCACTCTCACAGCCTCCAGTGCCTGGAGCCTTaGGCTCGGGCGCCCTGGGCC +
Preference number: 2 (lower is better)
Translates to: IATSVLGQAAWSSHSHSLQCLEP*ARAPWA
Trigger: GGCCCAGGGCGCCCGAGCTCAAGGCTCCAGGCACTG...GAGGCTGTGAGAGTGACTTGACCAGGCGGCTTGGCCGAGGACACTGGTGGCTAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638825.1
3UTR-3UTR GCA 90 bp CAGGCACCGCCAAAGTACTTACTGTTCACACCAGCTGCGGGCACCGGAGGGGCGGTGAGGGGCAGGTGCTaGTGGCACCACTGGGGGCTG +
Preference number: 2 (lower is better)
Translates to: QAPPKYLLFTPAAGTGGAVRGRC*WHHWGL
Trigger: CAGCCCCCAGTGGTGCCAGCAGCACCTGCCCCTCAC...CGCCCCTCCGGTGCCCGCAGCTGGTGTGAACAGTAAGTACTTTGGCGGTGCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR-3UTR GCA 90 bp CCATCTGCAAGAGCAGCCTGGGGGAGTCAAGGCTCCTCCTGCATTCCTGGGTACCCCTGCCCACCCATCTaGAGGAGCGCGAGGCGGCCC +
Preference number: 2 (lower is better)
Translates to: PSARAAWGSQGSSCIPGYPCPPI*RSARRP
Trigger: GGGCCGCCTCGCGCTCCTGCAGATGGGTGGGCAGGG...GTACCCAGGAATGCAGGAGGAGCCTTGACTCCCCCAGGCTGCTCTTGCAGATGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000638825.1
ENST00000675775.1
3UTR-3UTR GCA 90 bp CCATCTGCAAGAGCAGCCTGGGGGAGTCAAGGCTCCTCCTGCATTCCTGGGTACCCTTGCCCGCCGCCCTaGCCACCCATCTGCAGGAGC +
Preference number: 2 (lower is better)
Translates to: PSARAAWGSQGSSCIPGYPCPPP*PPICRS
Trigger: GCTCCTGCAGATGGGTGGGCAGGGCGGCGGGCAAGG...GTACCCAGGAATGCAGGAGGAGCCTTGACTCCCCCAGGCTGCTCTTGCAGATGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000638825.1
ENST00000675775.1
3UTR-3UTR CCA 90 bp CAGGCACCGCCAAAGTACTTACTGTTCACACCAGCTGCGGGCACCGGAGGGGCGATGGAAGCTGGGGCCTaGGCCAGCCCACGCGTTCCT +
Preference number: 2 (lower is better)
Translates to: QAPPKYLLFTPAAGTGGAMEAGA*ASPRVP
Trigger: AGGAACGCGTGGGCTGGCCCAGGCCCCAGCTTCCAT...CGCCCCTCCGGTGCCCGCAGCTGGTGTGAACAGTAAGTACTTTGGCGGTGCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR-3UTR TCA 90 bp AGGCTGGCAGCCCTCCGCCATGCAGCACCATGCGGGGAGTTGCGCACCGTGCCCTTTGCCTTTGGGACTTaGCCTGCCATCTGCAAGAGC +
Preference number: 2 (lower is better)
Translates to: RLAALRHAAPCGELRTVPFAFGT*PAICKS
Trigger: GCTCTTGCAGATGGCAGGTCAAGTCCCAAAGGCAAA...GGGCACGGTGCGCAACTCCCCGCATGGTGCTGCATGGCGGAGGGCTGCCAGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638825.1
3UTR-3UTR GCA 90 bp CTCCTGCATTCCTGGGTACCCCTGCCTTGGGGTCATGGCCTAAAGTCAACCTGTCCCTGCCCACCCATCTaGAGGAGCGCGAGGCGGCCC +
Preference number: 2 (lower is better)
Translates to: LLHSWVPLPWGHGLKSTCPCPPI*RSARRP
Trigger: GGGCCGCCTCGCGCTCCTGCAGATGGGTGGGCAGGG...ACAGGTTGACTTTAGGCCATGACCCCAAGGCAGGGGTACCCAGGAATGCAGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000638825.1
ENST00000675775.1
3UTR-3UTR GCA 90 bp GTCAAGGCTCCTCCTGCATTCCTGGGTACCCCTGCCTTGGGGTCATGGCCTAAACTCGGTGTGCCTGCCTaGCCCTCAGCGCCCTTGCCC +
Preference number: 2 (lower is better)
Translates to: VKAPPAFLGTPALGSWPKLGVPA*PSAPLP
Trigger: GGGCAAGGGCGCTGAGGGGCAGGCAGGCACACCGAG...TTTAGGCCATGACCCCAAGGCAGGGGTACCCAGGAATGCAGGAGGAGCCTTGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000638825.1
ENST00000675775.1
3UTR-3UTR GCA 90 bp ACGTTCCCTCGTCTCCGTGCGGGCTGCCTCTCCTCTTCTAGGTTTGCCTTTGCTCCCCCTCGGTGTGCCTaGCTGCCCCTCAGCGCCCTT +
Preference number: 2 (lower is better)
Translates to: TFPRLRAGCLSSSRFAFAPPRCA*LPLSAL
Trigger: AAGGGCGCTGAGGGGCAGGCAGGCACACCGAGGGGG...AGCAAAGGCAAACCTAGAAGAGGAGAGGCAGCCCGCACGGAGACGAGGGAACGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638825.1
3UTR-3UTR GCA 90 bp CCCAGGGGCACCAGTGAGGTTCCTCTAGCAGGCTCTTGCCTGCTGAATTTGGCCCACCTCCAGACTGAGTaGGGGGTCCGGGGTCACCCA +
Preference number: 2 (lower is better)
Translates to: PRGTSEVPLAGSCLLNLAHLQTE*GVRGHP
Trigger: TGGGTGACCCCGGACCCCGCACTCAGTCTGGAGGTG...GGCCAAATTCAGCAGGCAAGAGCCTGCTAGAGGAACCTCACTGGTGCCCCTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR-3UTR CCA 90 bp TGGGAGAGGGGAGGGAAACAGTATGGAGAGGACGCGGATGACGATGTGGGGGTTCTGCTTTCCAGAGGCTaGGGGCCCTGCCTCCCCCAG +
Preference number: 2 (lower is better)
Translates to: WERGGKQYGEDADDDVGVLLSRG*GPCLPQ
Trigger: CTGGGGGAGGCAGGGCCCCCAGCCTCTGGAAAGCAG...AACCCCCACATCGTCATCCGCGTCCTCTCCATACTGTTTCCCTCCCCTCTCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR CAA 90 bp GCGCTTTCATCTAAGCTGCCCAGGGTGGTGGCCCCCTCTAGTCTTTaGCTCGGCAGCCGCTTCCATCGGGTCACCGGAAACTCCCACTCG +
Preference number: 2 (lower is better)
Translates to: ALSSKLPRVVAPSSL*LGSRFHRVTGNSHS
Trigger: CGAGTGGGAGTTTCCGGTGACCCGATGGAAGCGGCTGCCGAGCAAAAGACTAGAGGGGGCCACCACCCTGGGCAGCTTAGATGAAAGCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR-3UTR TCA 90 bp CTGCCTCTGTGGAGATGGTGCCGCCTGAGACCCTTCTCTGGCTCTGAATGCTGGACCCAGGGGCACCAGTaGGGTTCCTCTAGCAGGCTC +
Preference number: 2 (lower is better)
Translates to: LPLWRWCRLRPFSGSECWTQGHQ*GSSSRL
Trigger: GAGCCTGCTAGAGGAACCTCACTGGTGCCCCTGGGT...CCAGCATTCAGAGCCAGAGAAGGGTCTCAGGCGGCACCATCTCCACAGAGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR-3UTR TCA 90 bp AAGCAGAGAGCTCGGAGCTGTTTCAGCCTCGGAGACCCCTGGCCATGTTCCTCTAGGCTCTGCCGGGGGTaGGAACCCTTGCACCTGCCT +
Preference number: 2 (lower is better)
Translates to: KQRARSCFSLGDPWPCSSRLCRG*EPLHLP
Trigger: AGGCAGGTGCAAGGGTTCTCACCCCCGGCAGAGCCT...AGAGGAACATGGCCAGGGGTCTCCGAGGCTGAAACAGCTCCGAGCTCTCTGCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR-3UTR TCA 90 bp GCCACTCGGACTCGTCCGGCAAACCTGCATGGCGTGAATTTACTCTGTCCGAGGGGCCCTCATCGGGAGTaGGGGCCTGGTCTATGTGGG +
Preference number: 2 (lower is better)
Translates to: ATRTRPANLHGVNLLCPRGPHRE*GPGLCG
Trigger: CCCACATAGACCAGGCCCTCACTCCCGATGAGGGCC...CCTCGGACAGAGTAAATTCACGCCATGCAGGTTTGCCGGACGAGTCCGAGTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638366.1
3UTR-3UTR GCA 90 bp CGTCCTAGTACAATGCCTGGGCCACTCGGACTCGTCCGGCAAACCTGCATGGCGAGGGTGAGGAGGGGCTaGAGGTCCACCCAGATGCTT +
Preference number: 2 (lower is better)
Translates to: RPSTMPGPLGLVRQTCMARVRRG*RSTQML
Trigger: AAGCATCTGGGTGGACCTGCAGCCCCTCCTCACCCT...CGCCATGCAGGTTTGCCGGACGAGTCCGAGTGGCCCAGGCATTGTACTAGGACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265969.8
ENST00000638366.1
ENST00000638825.1
ENST00000640909.2
3UTR-3UTR GCA 90 bp GCCCAGGCGGGGGCTTCTCTGAGACCTCACTGCTGTTCTAGGTGCCATGGGCAGTGCAAGGGACCCTCCTaGCCAGATCCCATGCACCAT +
Preference number: 2 (lower is better)
Translates to: AQAGASLRPHCCSRCHGQCKGPS*PDPMHH
Trigger: ATGGTGCATGGGATCTGGGCAGGAGGGTCCCTTGCA...CTGCCCATGGCACCTAGAACAGCAGTGAGGTCTCAGAGAAGCCCCCGCCTGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR-3UTR CCA 90 bp CTCTCAGGCACCTACAGAAATCCCAGGAAGGGAAGGGTATGCGGCAGGGTGAAACGCCCAGCATCTCCCTaGGCCCCCAGGCTCCACACC +
Preference number: 2 (lower is better)
Translates to: LSGTYRNPRKGRVCGRVKRPASP*APRLHT
Trigger: GGTGTGGAGCCTGGGGGCCCAGGGAGATGCTGGGCG...TTTCACCCTGCCGCATACCCTTCCCTTCCTGGGATTTCTGTAGGTGCCTGAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR-3UTR CCA 90 bp GCCCAGGCGGGGGCTTCTCTGAGACCTCACTGCTGTTCTAGGTGCCATGGGCAGCTAAGCTGCCCAGGGTaGTGGCCCCCTCTAGTCTTT +
Preference number: 2 (lower is better)
Translates to: AQAGASLRPHCCSRCHGQLSCPG*WPPLVF
Trigger: AAAGACTAGAGGGGGCCACCACCCTGGGCAGCTTAG...CTGCCCATGGCACCTAGAACAGCAGTGAGGTCTCAGAGAAGCCCCCGCCTGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR-3UTR CCA 90 bp CACCTCCAACTGGGAAAAAGCCAGTCGCAAAGGGGAACATCAGGCCCATCCATGGTCCGGGCCAGTGCCTaGAGCCTTGAGCTCGGGCGC +
Preference number: 2 (lower is better)
Translates to: HLQLGKSQSQRGTSGPSMVRASA*SLELGR
Trigger: GCGCCCGAGCTCAAGGCTCCAGGCACTGGCCCGGAC...CATGGATGGGCCTGATGTTCCCCTTTGCGACTGGCTTTTTCCCAGTTGGAGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638825.1
3UTR CAA 90 bp GATCCTTTCTCATTCCTCCACCAGGTGGGCACGCGTACTCCCCGGTaGATAAGAGGAAGCAGGGTCCGTATCTCTCGCGGGTGCCCGAGC +
Preference number: 2 (lower is better)
Translates to: DPFSFLHQVGTRTPR*IRGSRVRISRGCPS
Trigger: GCTCGGGCACCCGCGAGAGATACGGACCCTGCTTCCTCTTATCAACCGGGGAGTACGCGTGCCCACCTGGTGGAGGAATGAGAAAGGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638366.1
3UTR-3UTR TCA 90 bp CCTCGGCCAAGCCGCCTGGTCAAGTCACTCTCACAGCCTCTGTCGGCATATACTTACTCTGTCCGAGGGTaGGGAGGGGCTGCAGGTCCA +
Preference number: 2 (lower is better)
Translates to: PRPSRLVKSLSQPLSAYTYSVRG*GGAAGP
Trigger: TGGACCTGCAGCCCCTCCTCACCCTCGGACAGAGTA...AGTATATGCCGACAGAGGCTGTGAGAGTGACTTGACCAGGCGGCTTGGCCGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638366.1
ENST00000638825.1
3UTR-3UTR TCA 90 bp GCCACTCGGACTCGTCCGGCAAACCTGCATGGCGTGAATTTACTCTGTCCGAGGTACTCTGTCCGAGGGTaGGGAGGGGCTGCAGGTCCA +
Preference number: 2 (lower is better)
Translates to: ATRTRPANLHGVNLLCPRYSVRG*GGAAGP
Trigger: TGGACCTGCAGCCCCTCCTCACCCTCGGACAGAGTA...CCTCGGACAGAGTAAATTCACGCCATGCAGGTTTGCCGGACGAGTCCGAGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265969.8
ENST00000638366.1
ENST00000638825.1
ENST00000640909.2
3UTR-3UTR GCA 90 bp CGCAACTCCTCTTGGTGGCGGATAGCCGGGGTCTCACACGCCAGCTTTTGGAGGGGGGGTGAGAACCCTTaGACCTGCCTTTGCAAGGGA +
Preference number: 2 (lower is better)
Translates to: RNSSWWRIAGVSHASFWRGGENP*TCLCKG
Trigger: TCCCTTGCAAAGGCAGGTGCAAGGGTTCTCACCCCC...CCTCCAAAAGCTGGCGTGTGAGACCCCGGCTATCCGCCACCAAGAGGAGTTGCG
61% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR-3UTR GCA 90 bp AGAAAAAGCTACGTCCGTCCTAGTACAATGCCTGGGCCACTCGGACTCGTCCGGAGGCGGCCCGGACGATaGACGGTGCTCCAGCTTCCT +
Preference number: 2 (lower is better)
Translates to: RKSYVRPSTMPGPLGLVRRRPGR*TVLQLP
Trigger: AGGAAGCTGGAGCACCGTGCATCGTCCGGGCCGCCT...CCGGACGAGTCCGAGTGGCCCAGGCATTGTACTAGGACGGACGTAGCTTTTTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638825.1
3UTR-3UTR CCA 90 bp CTGCCTCTGTGGAGATGGTGCCGCCTGAGACCCTTCTCTGGCTCTGAATGCTGGCCCATGCCTGGCCCCTaGCGTCACTTCATTTCTCCG +
Preference number: 2 (lower is better)
Translates to: LPLWRWCRLRPFSGSECWPMPGP*RHFISP
Trigger: CGGAGAAATGAAGTGACGCCAGGGGCCAGGCATGGG...CCAGCATTCAGAGCCAGAGAAGGGTCTCAGGCGGCACCATCTCCACAGAGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR-3UTR CCA 90 bp AGAACCACGTTCCCTCGTCTCCGTGCGGGCTGCCTCTCCTCTTCTAGGTTTGCCCTCGGCCAAGCCGCCTaGTCAAGTCACTCTCACAGC +
Preference number: 2 (lower is better)
Translates to: RTTFPRLRAGCLSSSRFALGQAA*SSHSHS
Trigger: GCTGTGAGAGTGACTTGACCAGGCGGCTTGGCCGAG...GGCAAACCTAGAAGAGGAGAGGCAGCCCGCACGGAGACGAGGGAACGTGGTTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638825.1
3UTR CAA 90 bp GCCCACTCCACTGCCCTCCTCAATCAGGGGAGAGGAGAGATCACTTaGCCTTTGGGACTTGACCTGCCATCTGCAAGAGCAGCCTGGGGG +
Preference number: 2 (lower is better)
Translates to: AHSTALLNQGRGEIT*PLGLDLPSARAAWG
Trigger: CCCCCAGGCTGCTCTTGCAGATGGCAGGTCAAGTCCCAAAGGCAAAGTGATCTCTCCTCTCCCCTGATTGAGGAGGGCAGTGGAGTGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638825.1
ENST00000675775.1
3UTR-3UTR GCA 90 bp GCCTGGGCCACTCGGACTCGTCCGGCAAACCTGCATGGCGTGAATTTACTCTGTAGGGTGAGGAGGGGCTaGAGGTCCACCCAGATGCTT +
Preference number: 2 (lower is better)
Translates to: AWATRTRPANLHGVNLLCRVRRG*RSTQML
Trigger: AAGCATCTGGGTGGACCTGCAGCCCCTCCTCACCCT...ACAGAGTAAATTCACGCCATGCAGGTTTGCCGGACGAGTCCGAGTGGCCCAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265969.8
ENST00000638366.1
ENST00000638825.1
ENST00000640909.2
3UTR-3UTR GCA 90 bp CAGGCACCGCCAAAGTACTTACTGTTCACACCAGCTGCGGGCACCGGAGGGGCGCCCATGCACCATCTCTaGCATCTACACAGCCTGAAG +
Preference number: 2 (lower is better)
Translates to: QAPPKYLLFTPAAGTGGAPMHHL*HLHSLK
Trigger: CTTCAGGCTGTGTAGATGGCAGAGATGGTGCATGGG...CGCCCCTCCGGTGCCCGCAGCTGGTGTGAACAGTAAGTACTTTGGCGGTGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR-3UTR GCA 90 bp CTGGCGTCACTTCATTTCTCCGCTACTTCCCCCACAGCCCACCTGAGGACAACACTGGGCAGCCACTGCTaGCCAGCAGGGGAAGTAGAG +
Preference number: 2 (lower is better)
Translates to: LASLHFSATSPTAHLRTTLGSHC*PAGEVE
Trigger: CTCTACTTCCCCTGCTGGGCAGCAGTGGCTGCCCAG...TGTTGTCCTCAGGTGGGCTGTGGGGGAAGTAGCGGAGAAATGAAGTGACGCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR-3UTR GCA 90 bp TGTAGGTGGGGACACTTCACCCTTAGCGCCTCCCAAAGACTCTGGCACCTAAGCGATTCCCTCCATCCTTaGCCCCCTCGGTGTGCCTGC +
Preference number: 2 (lower is better)
Translates to: CRWGHFTLSASQRLWHLSDSLHP*PPRCAC
Trigger: GCAGGCACACCGAGGGGGGCAAGGATGGAGGGAATC...GCTTAGGTGCCAGAGTCTTTGGGAGGCGCTAAGGGTGAAGTGTCCCCACCTACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638825.1
3UTR-3UTR GCA 90 bp CCATCTGCAAGAGCAGCCTGGGGGAGTCAAGGCTCCTCCTGCATTCCTGGGTACCCAGCAACCCACAGCTaGCAGGGCCTCAAGTTCTCT +
Preference number: 2 (lower is better)
Translates to: PSARAAWGSQGSSCIPGYPATHS*QGLKFS
Trigger: AGAGAACTTGAGGCCCTGGCAGCTGTGGGTTGCTGG...GTACCCAGGAATGCAGGAGGAGCCTTGACTCCCCCAGGCTGCTCTTGCAGATGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000638825.1
ENST00000675775.1
3UTR-3UTR GCA 90 bp ACGTTCCCTCGTCTCCGTGCGGGCTGCCTCTCCTCTTCTAGGTTTGCCTTTGCTGCCCAGCCAGTCTGCTaGACCAAGAAAGGTGCCCTC +
Preference number: 2 (lower is better)
Translates to: TFPRLRAGCLSSSRFAFAAQPVC*TKKGAL
Trigger: GAGGGCACCTTTCTTGGTGCAGCAGACTGGCTGGGC...AGCAAAGGCAAACCTAGAAGAGGAGAGGCAGCCCGCACGGAGACGAGGGAACGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638825.1
3UTR-3UTR CCA 90 bp GCCCAGGCGGGGGCTTCTCTGAGACCTCACTGCTGTTCTAGGTGCCATGGGCAGCAGTCTGACTGGATCTaGAATCATCGCTACAGGGGG +
Preference number: 2 (lower is better)
Translates to: AQAGASLRPHCCSRCHGQQSDWI*NHRYRG
Trigger: CCCCCTGTAGCGATGATTCCAGATCCAGTCAGACTG...CTGCCCATGGCACCTAGAACAGCAGTGAGGTCTCAGAGAAGCCCCCGCCTGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR-3UTR CCA 90 bp GGGAGAGACTGTGGAGCTCAGGGGCAATCCCACAGGAGTGCATGGGTTTTACAGGCTACAGGCGTCTCCTaGGAAGGACCTCGAGCTGGG +
Preference number: 2 (lower is better)
Translates to: GRDCGAQGQSHRSAWVLQATGVS*EGPRAG
Trigger: CCCAGCTCGAGGTCCTTCCCAGGAGACGCCTGTAGC...CTGTAAAACCCATGCACTCCTGTGGGATTGCCCCTGAGCTCCACAGTCTCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR-3UTR CCA 90 bp GACCCCTGGCCATGTTCCTCTCAGGCACCTACAGAAATCCCAGGAAGGGAAGGGTGCAGTCCCTACCGCTaGAAACGGGGAGAACCCTCG +
Preference number: 2 (lower is better)
Translates to: DPWPCSSQAPTEIPGREGCSPYR*KRGEPS
Trigger: CGAGGGTTCTCCCCGTTTCCAGCGGTAGGGACTGCA...CCCTTCCCTTCCTGGGATTTCTGTAGGTGCCTGAGAGGAACATGGCCAGGGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR-3UTR CCA 90 bp CGCAACTCCTCTTGGTGGCGGATAGCCGGGGTCTCACACGCCAGCTTTTGGAGGAGAAGAGGATTGGGATaGGGTGGTGGGTCAGAGAGC +
Preference number: 2 (lower is better)
Translates to: RNSSWWRIAGVSHASFWRRRGLG*GGGSES
Trigger: GCTCTCTGACCCACCACCCCATCCCAATCCTCTTCT...CCTCCAAAAGCTGGCGTGTGAGACCCCGGCTATCCGCCACCAAGAGGAGTTGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR-3UTR CCA 90 bp CAGACACACAGACTGAGGCTTCAGACGAGACCAAGAGGTGGAGGTGAGGGGCAGCTGGGGATTCTTGACTaGCTGGCCCAGGGCACCTGT +
Preference number: 2 (lower is better)
Translates to: QTHRLRLQTRPRGGGEGQLGILD*LAQGTC
Trigger: ACAGGTGCCCTGGGCCAGCCAGTCAAGAATCCCCAG...CTGCCCCTCACCTCCACCTCTTGGTCTCGTCTGAAGCCTCAGTCTGTGTGTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR-3UTR CCA 90 bp CGGACTCGTCCGGCAAACCTGCATGGCGTGAATTTACTCTGTCCGAGGGTGAGGTCGGGAGTGAGGGCCTaGTCTATGTGGGGGCAGTCT +
Preference number: 2 (lower is better)
Translates to: RTRPANLHGVNLLCPRVRSGVRA*SMWGQS
Trigger: AGACTGCCCCCACATAGACCAGGCCCTCACTCCCGA...CCTCACCCTCGGACAGAGTAAATTCACGCCATGCAGGTTTGCCGGACGAGTCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638366.1
3UTR-3UTR CCA 90 bp GGCGTGAATTTACTCTGTCCGAGGGTGAGGAGGGGCTGCAGGTCCACCCAGATGCCGTGCCCAGCCTCCTaGTCCCTTTTTATAGGGACG +
Preference number: 2 (lower is better)
Translates to: GVNLLCPRVRRGCRSTQMPCPAS*SLFIGT
Trigger: CGTCCCTATAAAAAGGGACCAGGAGGCTGGGCACGG...CATCTGGGTGGACCTGCAGCCCCTCCTCACCCTCGGACAGAGTAAATTCACGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000640909.2
3UTR-3UTR CCA 90 bp GGACTTGACCTGCCATCTGCAAGAGCAGCCTGGGGGAGTCAAGGCTCCTCCTGCTGGGTACCCCTGCCTTaGGGTCATGGCCTAAAGTCA +
Preference number: 2 (lower is better)
Translates to: GLDLPSARAAWGSQGSSCWVPLP*GHGLKS
Trigger: TGACTTTAGGCCATGACCCCAAGGCAGGGGTACCCA...GCAGGAGGAGCCTTGACTCCCCCAGGCTGCTCTTGCAGATGGCAGGTCAAGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000638825.1
ENST00000675775.1
3UTR-3UTR CCA 90 bp AATAGCCACCAGTGTCCTCGGCCAAGCCGCCTGGTCAAGTCACTCTCACAGCCTTCTGCAAGAGCAGCCTaGGGGAGTCAAGGCTCCTCC +
Preference number: 2 (lower is better)
Translates to: NSHQCPRPSRLVKSLSQPSARAA*GSQGSS
Trigger: GGAGGAGCCTTGACTCCCCCAGGCTGCTCTTGCAGA...AGGCTGTGAGAGTGACTTGACCAGGCGGCTTGGCCGAGGACACTGGTGGCTATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638825.1
3UTR-3UTR TCA 90 bp TGTGAGGGCCCCAAATACTTCCTCAGCCACAGAGACTGTCCAAGCCAGAACTGTTCCACACCTCCAGACTaGGTGCGGGGTCCGGGGTCA +
Preference number: 2 (lower is better)
Translates to: CEGPKYFLSHRDCPSQNCSTPPD*VRGPGS
Trigger: TGACCCCGGACCCCGCACTCAGTCTGGAGGTGTGGA...ACAGTTCTGGCTTGGACAGTCTCTGTGGCTGAGGAAGTATTTGGGGCCCTCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR-3UTR TCA 90 bp CTGGCGTCACTTCATTTCTCCGCTACTTCCCCCACAGCCCACCTGAGGACAACAACCGGGTCAGTAGCCTaGGTCAGAGACTCACACCGG +
Preference number: 2 (lower is better)
Translates to: LASLHFSATSPTAHLRTTTGSVA*VRDSHR
Trigger: CCGGTGTGAGTCTCTGACTCAGGCTACTGACCCGGT...TGTTGTCCTCAGGTGGGCTGTGGGGGAAGTAGCGGAGAAATGAAGTGACGCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR-3UTR TCA 90 bp CTGGCGTCACTTCATTTCTCCGCTACTTCCCCCACAGCCCACCTGAGGACAACACCTCCCGGCCCCCAGTaGATTCACGGGAAAGTGGTT +
Preference number: 2 (lower is better)
Translates to: LASLHFSATSPTAHLRTTPPGPQ*IHGKVV
Trigger: AACCACTTTCCCGTGAATTCACTGGGGGCCGGGAGG...TGTTGTCCTCAGGTGGGCTGTGGGGGAAGTAGCGGAGAAATGAAGTGACGCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR-3UTR GCA 90 bp GGACTTGACCTGCCATCTGCAAGAGCAGCCTGGGGGAGTCAAGGCTCCTCCTGCGCAGGTCCACCCAGATaGTTAATAGCCACCAGTGTC +
Preference number: 2 (lower is better)
Translates to: GLDLPSARAAWGSQGSSCAGPPR*LIATSV
Trigger: GACACTGGTGGCTATTAAGCATCTGGGTGGACCTGC...GCAGGAGGAGCCTTGACTCCCCCAGGCTGCTCTTGCAGATGGCAGGTCAAGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638825.1
3UTR-3UTR GCA 90 bp CGCAACTCCTCTTGGTGGCGGATAGCCGGGGTCTCACACGCCAGCTTTTGGAGGGGATGTCTATATTGCTaGTGCAGTCCCTACCGCTGG +
Preference number: 2 (lower is better)
Translates to: RNSSWWRIAGVSHASFWRGCLYC*CSPYRW
Trigger: CCAGCGGTAGGGACTGCAGCAGCAATATAGACATCC...CCTCCAAAAGCTGGCGTGTGAGACCCCGGCTATCCGCCACCAAGAGGAGTTGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR-3UTR GCA 90 bp GCCCTCCTCAATCAGGGGAGAGGAGAGATCACTTTGCCTTTGGGACTTGACCTGGATTCCCTCCATCCTTaGCCCCCTCGGTGTGCCTGC +
Preference number: 2 (lower is better)
Translates to: ALLNQGRGEITLPLGLDLDSLHP*PPRCAC
Trigger: GCAGGCACACCGAGGGGGGCAAGGATGGAGGGAATC...CAGGTCAAGTCCCAAAGGCAAAGTGATCTCTCCTCTCCCCTGATTGAGGAGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000638825.1
ENST00000675775.1
3UTR-3UTR GCA 90 bp AATAGCCACCAGTGTCCTCGGCCAAGCCGCCTGGTCAAGTCACTCTCACAGCCTAGGCACTCCAAGACATaGACGAGCTGCCCAGCCAGT +
Preference number: 2 (lower is better)
Translates to: NSHQCPRPSRLVKSLSQPRHSKT*TSCPAS
Trigger: ACTGGCTGGGCAGCTCGTGCATGTCTTGGAGTGCCT...AGGCTGTGAGAGTGACTTGACCAGGCGGCTTGGCCGAGGACACTGGTGGCTATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638825.1
3UTR-3UTR CCA 90 bp CTCTCAGGCACCTACAGAAATCCCAGGAAGGGAAGGGTATGCGGCAGGGTGAAAGGGGAGAACCCTCGGTaGGAGGCTGTTGCTGGTCTG +
Preference number: 2 (lower is better)
Translates to: LSGTYRNPRKGRVCGRVKGENPR*EAVAGL
Trigger: CAGACCAGCAACAGCCTCCCACCGAGGGTTCTCCCC...TTTCACCCTGCCGCATACCCTTCCCTTCCTGGGATTTCTGTAGGTGCCTGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR-3UTR CCA 90 bp GCCCAGGCGGGGGCTTCTCTGAGACCTCACTGCTGTTCTAGGTGCCATGGGCAGAACCTCCTGCTCACCTaGCACTCCTTCTTACTCAGT +
Preference number: 2 (lower is better)
Translates to: AQAGASLRPHCCSRCHGQNLLLT*HSFLLS
Trigger: ACTGAGTAAGAAGGAGTGCCAGGTGAGCAGGAGGTT...CTGCCCATGGCACCTAGAACAGCAGTGAGGTCTCAGAGAAGCCCCCGCCTGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR-3UTR CCA 90 bp TGGGAGAGGGGAGGGAAACAGTATGGAGAGGACGCGGATGACGATGTGGGGGTTGGATTCTTGACTGGCTaGCCCAGGGCACCTGTGCTT +
Preference number: 2 (lower is better)
Translates to: WERGGKQYGEDADDDVGVGFLTG*PRAPVL
Trigger: AAGCACAGGTGCCCTGGGCCAGCCAGTCAAGAATCC...AACCCCCACATCGTCATCCGCGTCCTCTCCATACTGTTTCCCTCCCCTCTCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR-3UTR CCA 90 bp TGGGAGAGGGGAGGGAAACAGTATGGAGAGGACGCGGATGACGATGTGGGGGTTCGGGAAGTGAGTGCTTaGGAAGGGCTTGGGAGCACA +
Preference number: 2 (lower is better)
Translates to: WERGGKQYGEDADDDVGVREVSA*EGLGST
Trigger: TGTGCTCCCAAGCCCTTCCCAAGCACTCACTTCCCG...AACCCCCACATCGTCATCCGCGTCCTCTCCATACTGTTTCCCTCCCCTCTCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR-3UTR CCA 90 bp CTGCCTCTGTGGAGATGGTGCCGCCTGAGACCCTTCTCTGGCTCTGAATGCTGGAGACTGGAAAGGCCTTaGGGGGCTGCATCTCATCTC +
Preference number: 2 (lower is better)
Translates to: LPLWRWCRLRPFSGSECWRLERP*GAASHL
Trigger: GAGATGAGATGCAGCCCCCCAAGGCCTTTCCAGTCT...CCAGCATTCAGAGCCAGAGAAGGGTCTCAGGCGGCACCATCTCCACAGAGGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR-3UTR CCA 90 bp CCATCTGCAAGAGCAGCCTGGGGGAGTCAAGGCTCCTCCTGCATTCCTGGGTACCCTGCCTTGGGGTCATaGCCTAAAGTCAACCTGTCC +
Preference number: 2 (lower is better)
Translates to: PSARAAWGSQGSSCIPGYPALGS*PKVNLS
Trigger: GGACAGGTTGACTTTAGGCCATGACCCCAAGGCAGG...GTACCCAGGAATGCAGGAGGAGCCTTGACTCCCCCAGGCTGCTCTTGCAGATGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000638825.1
ENST00000675775.1
3UTR-3UTR CCA 90 bp CACACTCCCTTCTGTGCTTCTGGCACCACAGTAAAGAGACTGTCTTGTCTGCTCGGCCGGTGCCAAGGATaGGACCCTCCCGAAGGCTGG +
Preference number: 2 (lower is better)
Translates to: HTPFCASGTTVKRLSCLLGRCQG*DPPEGW
Trigger: CCAGCCTTCGGGAGGGTCCCATCCTTGGCACCGGCC...GAGCAGACAAGACAGTCTCTTTACTGTGGTGCCAGAAGCACAGAAGGGAGTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638825.1
3UTR CAA 90 bp CCCTCCTCAATCAGGGGAGAGGAGAGATCACTTTGCCTTTGGGACTaGACCTGCCATCTGCAAGAGCAGCCTGGGGGAGTCAAGGCTCCT +
Preference number: 2 (lower is better)
Translates to: PSSIRGEERSLCLWD*TCHLQEQPGGVKAP
Trigger: AGGAGCCTTGACTCCCCCAGGCTGCTCTTGCAGATGGCAGGTCAAGTCCCAAAGGCAAAGTGATCTCTCCTCTCCCCTGATTGAGGAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000638825.1
ENST00000675775.1
3UTR-3UTR TCA 90 bp TGCAGGTCCACCCAGATGCTTAATAGCCACCAGTGTCCTCGGCCAAGCCGCCTGCAAACCTGCATGGCGTaGATTTACTCTGTCCGAGGG +
Preference number: 2 (lower is better)
Translates to: CRSTQMLNSHQCPRPSRLQTCMA*IYSVRG
Trigger: CCCTCGGACAGAGTAAATTCACGCCATGCAGGTTTG...CAGGCGGCTTGGCCGAGGACACTGGTGGCTATTAAGCATCTGGGTGGACCTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265969.8
ENST00000638366.1
ENST00000638825.1
ENST00000640909.2
3UTR-3UTR GCA 90 bp GGCCGTAGAAAAAGCTACGTCCGTCCTAGTACAATGCCTGGGCCACTCGGACTCTCCGTCCTAGTACAATaGCTGGGCCACTCGGACTCG +
Preference number: 2 (lower is better)
Translates to: GRRKSYVRPSTMPGPLGLSVLVQ*LGHSDS
Trigger: CGAGTCCGAGTGGCCCAGGCATTGTACTAGGACGGA...GAGTCCGAGTGGCCCAGGCATTGTACTAGGACGGACGTAGCTTTTTCTACGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265969.8
ENST00000638366.1
ENST00000638825.1
ENST00000640909.2
3UTR-3UTR GCA 90 bp CTCTCAGGCACCTACAGAAATCCCAGGAAGGGAAGGGTATGCGGCAGGGTGAAACCTTGCACCTGCCTTTaGAAGGGACCCTCCTGCCCA +
Preference number: 2 (lower is better)
Translates to: LSGTYRNPRKGRVCGRVKPCTCL*KGPSCP
Trigger: TGGGCAGGAGGGTCCCTTGCAAAGGCAGGTGCAAGG...TTTCACCCTGCCGCATACCCTTCCCTTCCTGGGATTTCTGTAGGTGCCTGAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR-3UTR GCA 90 bp AAGCAGAGAGCTCGGAGCTGTTTCAGCCTCGGAGACCCCTGGCCATGTTCCTCTTCGGTGGGAGGCTGTTaGTGGTCTGTAGCGCTTTCA +
Preference number: 2 (lower is better)
Translates to: KQRARSCFSLGDPWPCSSSVGGC*WSVALS
Trigger: TGAAAGCGCTACAGACCAGCAACAGCCTCCCACCGA...AGAGGAACATGGCCAGGGGTCTCCGAGGCTGAAACAGCTCCGAGCTCTCTGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR-3UTR GCA 90 bp CAGGTTTCTACTGAACGCCGTTACAGTTTGGCTCCAACAACGTGTGTGAAAGTCCCTTGCCCGCCGCCCTaGCCACCCATCTGCAGGAGC +
Preference number: 2 (lower is better)
Translates to: QVSTERRYSLAPTTCVKVPCPPP*PPICRS
Trigger: GCTCCTGCAGATGGGTGGGCAGGGCGGCGGGCAAGG...GACTTTCACACACGTTGTTGGAGCCAAACTGTAACGGCGTTCAGTAGAAACCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638825.1
3UTR-3UTR CCA 90 bp CTGGCGTCACTTCATTTCTCCGCTACTTCCCCCACAGCCCACCTGAGGACAACAAGGATTGGGATGGGGTaGTGGGTCAGAGAGCGCGAT +
Preference number: 2 (lower is better)
Translates to: LASLHFSATSPTAHLRTTRIGMG*WVRERD
Trigger: ATCGCGCTCTCTGACCCACCACCCCATCCCAATCCT...TGTTGTCCTCAGGTGGGCTGTGGGGGAAGTAGCGGAGAAATGAAGTGACGCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR-3UTR CCA 90 bp CTGCCTCTGTGGAGATGGTGCCGCCTGAGACCCTTCTCTGGCTCTGAATGCTGGCCATGGGCAAAGAAATaGGCCTTGAGGGTAGTGCTC +
Preference number: 2 (lower is better)
Translates to: LPLWRWCRLRPFSGSECWPWAKK*ALRVVL
Trigger: GAGCACTACCCTCAAGGCCCATTTCTTTGCCCATGG...CCAGCATTCAGAGCCAGAGAAGGGTCTCAGGCGGCACCATCTCCACAGAGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR CAA 90 bp TCCACTGCCCTCCTCAATCAGGGGAGAGGAGAGATCACTTTGCCTTaGGGACTTGACCTGCCATCTGCAAGAGCAGCCTGGGGGAGTCAA +
Preference number: 2 (lower is better)
Translates to: STALLNQGRGEITLP*GLDLPSARAAWGSQ
Trigger: TTGACTCCCCCAGGCTGCTCTTGCAGATGGCAGGTCAAGTCCCAAAGGCAAAGTGATCTCTCCTCTCCCCTGATTGAGGAGGGCAGTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000638825.1
ENST00000675775.1
3UTR-3UTR TCA 90 bp GCCAGCCTAGCACGCCTCTTTCTCTCCCTCCTGGGGGAATGGGATGAGTCCCTAGGCTCAGAATTAGCCTaGGAAAAACAAGTCCTCGGC +
Preference number: 2 (lower is better)
Translates to: ASLARLFLSLLGEWDESLGSELA*EKQVLG
Trigger: GCCGAGGACTTGTTTTTCTCAGGCTAATTCTGAGCC...TAGGGACTCATCCCATTCCCCCAGGAGGGAGAGAAAGAGGCGTGCTAGGCTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000638825.1
3UTR-3UTR GCA 90 bp AGGATGCCTCTTCCATGCCAAGAACACGGATCTTGTGTAGCTAAGTTCACAGGGAGGCGGCCCGGACGATaGACGGTGCTCCAGCTTCCT +
Preference number: 2 (lower is better)
Translates to: RMPLPCQEHGSCVAKFTGRRPGR*TVLQLP
Trigger: AGGAAGCTGGAGCACCGTGCATCGTCCGGGCCGCCT...CCCTGTGAACTTAGCTACACAAGATCCGTGTTCTTGGCATGGAAGAGGCATCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638825.1
ENST00000675775.1
3UTR-3UTR GCA 90 bp CCATCTGCAAGAGCAGCCTGGGGGAGTCAAGGCTCCTCCTGCATTCCTGGGTACGCCTCAAGTTCTCTCTaGCAGCCTGACATCTCACTT +
Preference number: 2 (lower is better)
Translates to: PSARAAWGSQGSSCIPGYASSSL*QPDISL
Trigger: AAGTGAGATGTCAGGCTGGCAGAGAGAACTTGAGGC...GTACCCAGGAATGCAGGAGGAGCCTTGACTCCCCCAGGCTGCTCTTGCAGATGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000638825.1
ENST00000675775.1
3UTR-3UTR CCA 90 bp ACTCCAAGACATGCACGAGCTGCCCAGCCAGTCTGCTGCACCAAGAAAGGTGCCGTTGCAGGGGGTTGGTaGGTTTGGTTTGCTGGGTTT +
Preference number: 2 (lower is better)
Translates to: TPRHARAAQPVCCTKKGAVAGGW*VWFAGF
Trigger: AAACCCAGCAAACCAAACCCACCAACCCCCTGCAAC...GGCACCTTTCTTGGTGCAGCAGACTGGCTGGGCAGCTCGTGCATGTCTTGGAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638825.1
3UTR-3UTR CCA 90 bp GTGAGGGCCCCAAATACTTCCTCAGCCACAGAGACTGTCCAAGCCAGAACTGTCATTGGGATGGGGTGGTaGGTCAGAGAGCGCGATAGC +
Preference number: 2 (lower is better)
Translates to: VRAPNTSSATETVQARTVIGMGW*VRERDS
Trigger: GCTATCGCGCTCTCTGACCCACCACCCCATCCCAAT...GACAGTTCTGGCTTGGACAGTCTCTGTGGCTGAGGAAGTATTTGGGGCCCTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR-3UTR CCA 90 bp AGATGGCAAAGCATTTCACGTACAGTGCGTTTCTCGACAAATCCCAGGGGCTTCGGGACCCTGCAGCCCTaGACGCGGCACCACAAAGGA +
Preference number: 2 (lower is better)
Translates to: RWQSISRTVRFSTNPRGFGTLQP*TRHHKG
Trigger: TCCTTTGTGGTGCCGCGTCCAGGGCTGCAGGGTCCC...GAAGCCCCTGGGATTTGTCGAGAAACGCACTGTACGTGAAATGCTTTGCCATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR-3UTR CCA 90 bp CAAGGACAATGGCCTTACCCCCAAGCCCTGAAGACATCTCTCTCTTCTTGCCTCTCTGCAAGAGCAGCCTaGGGGAGTCAAGGCTCCTCC +
Preference number: 2 (lower is better)
Translates to: QGQWPYPQALKTSLSSCLSARAA*GSQGSS
Trigger: GGAGGAGCCTTGACTCCCCCAGGCTGCTCTTGCAGA...GAGGCAAGAAGAGAGAGATGTCTTCAGGGCTTGGGGGTAAGGCCATTGTCCTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000638825.1
ENST00000675775.1
3UTR CAA 90 bp GCTGCGGATGGAAGGGGCAGGACCGTCCTGCTCAACCACCTTCTCTaGGCAAGTTCTCGATCTGCCACTAGCAATATTCTGACTGCAAGG +
Preference number: 2 (lower is better)
Translates to: AADGRGRTVLLNHLL*ASSRSATSNILTAR
Trigger: CCTTGCAGTCAGAATATTGCTAGTGGCAGATCGAGAACTTGCCAAGAGAAGGTGGTTGAGCAGGACGGTCCTGCCCCTTCCATCCGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638825.1
3UTR-3UTR TCA 90 bp TGGGAGAGGGGAGGGAAACAGTATGGAGAGGACGCGGATGACGATGTGGGGGTTCGGACCAGAGCCCCATaGTCAACTTTATGTGCTATG +
Preference number: 2 (lower is better)
Translates to: WERGGKQYGEDADDDVGVRTRAP*STLCAM
Trigger: CATAGCACATAAAGTTGATCATGGGGCTCTGGTCCG...AACCCCCACATCGTCATCCGCGTCCTCTCCATACTGTTTCCCTCCCCTCTCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR-3UTR TCA 90 bp CTGGGCCACTCGGACTCGTCCGGCAAACCTGCATGGCGTGAATTTACTCTGTCCAAGGCTCTGTCTCCCTaGGGAAAAACCAGATGGAGT +
Preference number: 2 (lower is better)
Translates to: LGHSDSSGKPAWREFTLSKALSP*GKTRWS
Trigger: ACTCCATCTGGTTTTTCCTCAGGGAGACAGAGCCTT...GGACAGAGTAAATTCACGCCATGCAGGTTTGCCGGACGAGTCCGAGTGGCCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000640909.2
3UTR-3UTR GCA 90 bp AGAAAAAGCTACGTCCGTCCTAGTACAATGCCTGGGCCACTCGGACTCGTCCGGGCAGGTCCACCCAGATaGTTAATAGCCACCAGTGTC +
Preference number: 2 (lower is better)
Translates to: RKSYVRPSTMPGPLGLVRAGPPR*LIATSV
Trigger: GACACTGGTGGCTATTAAGCATCTGGGTGGACCTGC...CCGGACGAGTCCGAGTGGCCCAGGCATTGTACTAGGACGGACGTAGCTTTTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265969.8
ENST00000638366.1
ENST00000638825.1
ENST00000640909.2
3UTR-3UTR GCA 90 bp TCTCTGCCATCTACACAGCCTGAAGGGAGCCATGGTAAGGACCAGATCAAAGGCCCTCTAGCAGGCTCTTaGCTGCTGAATTTGGCCGCC +
Preference number: 2 (lower is better)
Translates to: SLPSTQPEGSHGKDQIKGPLAGS*LLNLAA
Trigger: GGCGGCCAAATTCAGCAGGCAAGAGCCTGCTAGAGG...GCCTTTGATCTGGTCCTTACCATGGCTCCCTTCAGGCTGTGTAGATGGCAGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR-3UTR GCA 90 bp TCGGAGACCCCTGGCCATGTTCCTCTCAGGCACCTACAGAAATCCCAGGAAGGGTTGGGATGTCTATATTaGTGCTGCAGTCCCTACCGC +
Preference number: 2 (lower is better)
Translates to: SETPGHVPLRHLQKSQEGLGCLY*CCSPYR
Trigger: GCGGTAGGGACTGCAGCAGCAATATAGACATCCCAA...CCCTTCCTGGGATTTCTGTAGGTGCCTGAGAGGAACATGGCCAGGGGTCTCCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR-3UTR GCA 90 bp CGCAACTCCTCTTGGTGGCGGATAGCCGGGGTCTCACACGCCAGCTTTTGGAGGGCAATCCCACAGGAGTaGATGGGTTTTACAGGTTTT +
Preference number: 2 (lower is better)
Translates to: RNSSWWRIAGVSHASFWRAIPQE*MGFTGF
Trigger: AAAACCTGTAAAACCCATGCACTCCTGTGGGATTGC...CCTCCAAAAGCTGGCGTGTGAGACCCCGGCTATCCGCCACCAAGAGGAGTTGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR-3UTR GCA 90 bp AATAGCCACCAGTGTCCTCGGCCAAGCCGCCTGGTCAAGTCACTCTCACAGCCTGCCTCAAGTTCTCTCTaGCAGCCTGACATCTCACTT +
Preference number: 2 (lower is better)
Translates to: NSHQCPRPSRLVKSLSQPASSSL*QPDISL
Trigger: AAGTGAGATGTCAGGCTGGCAGAGAGAACTTGAGGC...AGGCTGTGAGAGTGACTTGACCAGGCGGCTTGGCCGAGGACACTGGTGGCTATT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638825.1
3UTR-3UTR CCA 90 bp GCCTGGGCCACTCGGACTCGTCCGGCAAACCTGCATGGCGTGAATTTACTCTGTGGGGGTTGGTGGGTTTaGTTTGCTGGGTTTTCTGTT +
Preference number: 2 (lower is better)
Translates to: AWATRTRPANLHGVNLLCGGWWV*FAGFSV
Trigger: AACAGAAAACCCAGCAAACCAAACCCACCAACCCCC...ACAGAGTAAATTCACGCCATGCAGGTTTGCCGGACGAGTCCGAGTGGCCCAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000638825.1
3UTR-3UTR CCA 90 bp AGCACCAGTGACCAGAACCACGTTCCCTCGTCTCCGTGCGGGCTGCCTCTCCTCGAAAGTTGGTCACACTaGATCTACACACCGATAAGA +
Preference number: 2 (lower is better)
Translates to: STSDQNHVPSSPCGLPLLESWSH*IYTPIR
Trigger: TCTTATCGGTGTGTAGATCCAGTGTGACCAACTTTC...GAGGAGAGGCAGCCCGCACGGAGACGAGGGAACGTGGTTCTGGTCACTGGTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638825.1
3UTR-3UTR CCA 90 bp CGCAACTCCTCTTGGTGGCGGATAGCCGGGGTCTCACACGCCAGCTTTTGGAGGGGTAGAGGTAGACTATaGGCTTTATATCTTCGGACC +
Preference number: 2 (lower is better)
Translates to: RNSSWWRIAGVSHASFWRGRGRL*ALYLRT
Trigger: GGTCCGAAGATATAAAGCCCATAGTCTACCTCTACC...CCTCCAAAAGCTGGCGTGTGAGACCCCGGCTATCCGCCACCAAGAGGAGTTGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR-3UTR CCA 90 bp GCCCAAAGTTCGGGATGGTTTTGGGCAGGGGACAAGGAACATCCATCAGGGATCGAATCTGGGCCTGCCTaGAGAGCACTGGGGATTCTT +
Preference number: 2 (lower is better)
Translates to: AQSSGWFWAGDKEHPSGIESGPA*RALGIL
Trigger: AAGAATCCCCAGTGCTCTCCAGGCAGGCCCAGATTC...GATCCCTGATGGATGTTCCTTGTCCCCTGCCCAAAACCATCCCGAACTTTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR CAA 90 bp TCCCAGCTCTCACAATCACTAAAGGGCCCAAAGTTCGGGATGGTTTaGGGCAGGGGACAAGGAACATCCATCAGGGATCCCTGGAGGGAT +
Preference number: 2 (lower is better)
Translates to: SQLSQSLKGPKFGMV*GRGQGTSIRDPWRD
Trigger: ATCCCTCCAGGGATCCCTGATGGATGTTCCTTGTCCCCTGCCCAAAACCATCCCGAACTTTGGGCCCTTTAGTGATTGTGAGAGCTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR-3UTR TCA 90 bp CTGCCTCTGTGGAGATGGTGCCGCCTGAGACCCTTCTCTGGCTCTGAATGCTGGAGTGGTGGTAGAAGATaGGTTGGTTCAGCATGCTAT +
Preference number: 2 (lower is better)
Translates to: LPLWRWCRLRPFSGSECWSGGRR*VGSACY
Trigger: ATAGCATGCTGAACCAACTCATCTTCTACCACCACT...CCAGCATTCAGAGCCAGAGAAGGGTCTCAGGCGGCACCATCTCCACAGAGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR-3UTR TCA 90 bp CTGCCTCTGTGGAGATGGTGCCGCCTGAGACCCTTCTCTGGCTCTGAATGCTGGCCCAAACAGACAACGTaGAAGCTAGAGTCACTTCAA +
Preference number: 2 (lower is better)
Translates to: LPLWRWCRLRPFSGSECWPKQTT*KLESLQ
Trigger: TTGAAGTGACTCTAGCTTTCACGTTGTCTGTTTGGG...CCAGCATTCAGAGCCAGAGAAGGGTCTCAGGCGGCACCATCTCCACAGAGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR-3UTR TCA 90 bp CGCAACTCCTCTTGGTGGCGGATAGCCGGGGTCTCACACGCCAGCTTTTGGAGGGAATATATCCCACGGTaGCTAGTATTGTTTCATGCC +
Preference number: 2 (lower is better)
Translates to: RNSSWWRIAGVSHASFWREYIPR*LVLFHA
Trigger: GGCATGAAACAATACTAGTCACCGTGGGATATATTC...CCTCCAAAAGCTGGCGTGTGAGACCCCGGCTATCCGCCACCAAGAGGAGTTGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR-3UTR TCA 90 bp AGATGGCAAAGCATTTCACGTACAGTGCGTTTCTCGACAAATCCCAGGGGCTTCGCCTTGGGGGTACAGTaGGACTGGAAAGGCCTTGGG +
Preference number: 2 (lower is better)
Translates to: RWQSISRTVRFSTNPRGFALGVQ*DWKGLG
Trigger: CCCAAGGCCTTTCCAGTCTCACTGTACCCCCAAGGC...GAAGCCCCTGGGATTTGTCGAGAAACGCACTGTACGTGAAATGCTTTGCCATCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR-3UTR TCA 90 bp CAGAGGACCTGCCCAGGCAGACTAAGAAAGCAGATCTCCCACCACTCAGCCCAGACTGAGCTTAGTGCCTaGTGCTTGACAGAAGCAGTA +
Preference number: 2 (lower is better)
Translates to: QRTCPGRLRKQISHHSAQTELSA*CLTEAV
Trigger: TACTGCTTCTGTCAAGCATCAGGCACTAAGCTCAGT...CTGGGCTGAGTGGTGGGAGATCTGCTTTCTTAGTCTGCCTGGGCAGGTCCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639495.1
3UTR-3UTR TCA 90 bp ACTCCAAGACATGCACGAGCTGCCCAGCCAGTCTGCTGCACCAAGAAAGGTGCCCCACTAGCAATATTCTaGCTGCAAGGACAATGGCCT +
Preference number: 2 (lower is better)
Translates to: TPRHARAAQPVCCTKKGAPLAIF*LQGQWP
Trigger: AGGCCATTGTCCTTGCAGTCAGAATATTGCTAGTGG...GGCACCTTTCTTGGTGCAGCAGACTGGCTGGGCAGCTCGTGCATGTCTTGGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638825.1
3UTR-3UTR GCA 90 bp CGTAGAAAAAGCTACGTCCGTCCTAGTACAATGCCTGGGCCACTCGGACTCGTCGCAGGTCCACCCAGATaGTTAATAGCCACCAGTGTC +
Preference number: 2 (lower is better)
Translates to: RRKSYVRPSTMPGPLGLVAGPPR*LIATSV
Trigger: GACACTGGTGGCTATTAAGCATCTGGGTGGACCTGC...GACGAGTCCGAGTGGCCCAGGCATTGTACTAGGACGGACGTAGCTTTTTCTACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265969.8
ENST00000638366.1
ENST00000638825.1
ENST00000640909.2
3UTR-3UTR GCA 90 bp TGGGAGAGGGGAGGGAAACAGTATGGAGAGGACGCGGATGACGATGTGGGGGTTTGTCTATATTGCTGCTaGAGTCCCTACCGCTGGAAA +
Preference number: 2 (lower is better)
Translates to: WERGGKQYGEDADDDVGVCLYCC*SPYRWK
Trigger: TTTCCAGCGGTAGGGACTGCAGCAGCAATATAGACA...AACCCCCACATCGTCATCCGCGTCCTCTCCATACTGTTTCCCTCCCCTCTCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR-3UTR GCA 90 bp GCCCAAAGTTCGGGATGGTTTTGGGCAGGGGACAAGGAACATCCATCAGGGATCGATGGACAAGACACATaGGAATGGGCATGGCAGGAC +
Preference number: 2 (lower is better)
Translates to: AQSSGWFWAGDKEHPSGIDGQDT*EWAWQD
Trigger: GTCCTGCCATGCCCATTCGCATGTGTCTTGTCCATC...GATCCCTGATGGATGTTCCTTGTCCCCTGCCCAAAACCATCCCGAACTTTGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR-3UTR GCA 90 bp CACACTCCCTTCTGTGCTTCTGGCACCACAGTAAAGAGACTGTCTTGTCTGCTCAAGACATGCACGAGCTaGCCAGCCAGTCTGCTGCAC +
Preference number: 2 (lower is better)
Translates to: HTPFCASGTTVKRLSCLLKTCTS*PASLLH
Trigger: GTGCAGCAGACTGGCTGGGCAGCTCGTGCATGTCTT...GAGCAGACAAGACAGTCTCTTTACTGTGGTGCCAGAAGCACAGAAGGGAGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638825.1
3UTR-3UTR CCA 90 bp AGAAAAAGCTACGTCCGTCCTAGTACAATGCCTGGGCCACTCGGACTCGTCCGGTCCGGCAAACCTGCATaGCGTGAATTTACTCTGTCC +
Preference number: 2 (lower is better)
Translates to: RKSYVRPSTMPGPLGLVRSGKPA*REFTLS
Trigger: GGACAGAGTAAATTCACGCCATGCAGGTTTGCCGGA...CCGGACGAGTCCGAGTGGCCCAGGCATTGTACTAGGACGGACGTAGCTTTTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265969.8
ENST00000638366.1
ENST00000638825.1
ENST00000640909.2
3UTR-3UTR CCA 90 bp ACAGCTGGCTTTTCTGCCCTGGTCTCCAGGCACCGCCAAAGTACTTACTGTTCACAAGACACATGCGAATaGGCATGGCAGGACGGAGGA +
Preference number: 2 (lower is better)
Translates to: TAGFSALVSRHRQSTYCSQDTCE*AWQDGG
Trigger: TCCTCCGTCCTGCCATGCCCATTCGCATGTGTCTTG...TGAACAGTAAGTACTTTGGCGGTGCCTGGAGACCAGGGCAGAAAAGCCAGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR-3UTR CCA 90 bp CACACTCCCTTCTGTGCTTCTGGCACCACAGTAAAGAGACTGTCTTGTCTGCTCGGCTCAAAGGACCTCTaGGCAGGGCAGAGAAGCAGA +
Preference number: 2 (lower is better)
Translates to: HTPFCASGTTVKRLSCLLGSKDL*AGQRSR
Trigger: TCTGCTTCTCTGCCCTGCCCAGAGGTCCTTTGAGCC...GAGCAGACAAGACAGTCTCTTTACTGTGGTGCCAGAAGCACAGAAGGGAGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638825.1
3UTR CAA 90 bp GTGAATTCACGGGAAAGTGGTTGTACACTGGTTGGGATGTCTATATaGCTGCTGCAGTCCCTACCGCTGGAAACGGGGAGAACCCTCGGT +
Preference number: 2 (lower is better)
Translates to: VNSRESGCTLVGMSI*LLQSLPLETGRTLG
Trigger: ACCGAGGGTTCTCCCCGTTTCCAGCGGTAGGGACTGCAGCAGCAATATAGACATCCCAACCAGTGTACAACCACTTTCCCGTGAATTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR-3UTR TCA 90 bp AGCCGTGCGAGTTTCCACAATTCTATTTGGAGCAAAGTTCTCAGTTTCCACGTGTACTCTGTCCGAGGGTaGGGAGGGGCTGCAGGTCCA +
Preference number: 2 (lower is better)
Translates to: SRASFHNSIWSKVLSFHVYSVRG*GGAAGP
Trigger: TGGACCTGCAGCCCCTCCTCACCCTCGGACAGAGTA...CACGTGGAAACTGAGAACTTTGCTCCAAATAGAATTGTGGAAACTCGCACGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000638825.1
3UTR-3UTR TCA 90 bp ATGCTTAATAGCCACCAGTGTCCTCGGCCAAGCCGCCTGGTCAAGTCACTCTCAAAGGTGAGGTCAATATaGCCGATGACTGACCGACTG +
Preference number: 2 (lower is better)
Translates to: MLNSHQCPRPSRLVKSLSKVRSI*PMTDRL
Trigger: CAGTCGGTCAGTCATCGGTCATATTGACCTCACCTT...TGAGAGTGACTTGACCAGGCGGCTTGGCCGAGGACACTGGTGGCTATTAAGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638825.1
3UTR-3UTR TCA 90 bp TGGGGAAACTATGGCAGAGAGGGTAACTTGCTCAAGGAGGAGAACCTTGTCCTGTGCAGCCTGTCTCCATaGAGGCATAGAAGGGGACCA +
Preference number: 2 (lower is better)
Translates to: WGNYGREGNLLKEENLVLCSLSP*RHRRGP
Trigger: TGGTCCCCTTCTATGCCTTCATGGAGACAGGCTGCA...CAGGACAAGGTTCTCCTCCTTGAGCAAGTTACCCTCTCTGCCATAGTTTCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
3UTR-3UTR TCA 90 bp CCATGCCAAGAACACGGATCTTGTGTAGCTAAGTTCACAGGGTCCTGGCCCACTTTTGCCTTTGGGACTTaGCCTGCCATCTGCAAGAGC +
Preference number: 2 (lower is better)
Translates to: PCQEHGSCVAKFTGSWPTFAFGT*PAICKS
Trigger: GCTCTTGCAGATGGCAGGTCAAGTCCCAAAGGCAAA...AGTGGGCCAGGACCCTGTGAACTTAGCTACACAAGATCCGTGTTCTTGGCATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638825.1
ENST00000675775.1
3UTR-3UTR GCA 90 bp TTCTGGCACCACAGTAAAGAGACTGTCTTGTCTGCTCTTTGGGGCCACACCAATTCCGTCCTAGTACAATaGCTGGGCCACTCGGACTCG +
Preference number: 2 (lower is better)
Translates to: FWHHSKETVLSALWGHTNSVLVQ*LGHSDS
Trigger: CGAGTCCGAGTGGCCCAGGCATTGTACTAGGACGGA...ATTGGTGTGGCCCCAAAGAGCAGACAAGACAGTCTCTTTACTGTGGTGCCAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638825.1
3UTR-3UTR GCA 90 bp TCGGACCAGAGCCCCATGATCAACTTTATGTGCTATGTGCAGGTTCTCATAAAACTCACACCGGACTCCTaGCCCACCAAGCAGAGCCCC +
Preference number: 2 (lower is better)
Translates to: SDQSPMINFMCYVQVLIKLTPDS*PTKQSP
Trigger: GGGGCTCTGCTTGGTGGGGCAGGAGTCCGGTGTGAG...TTTTATGAGAACCTGCACATAGCACATAAAGTTGATCATGGGGCTCTGGTCCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR-3UTR GCA 90 bp GACCCCTGGCCATGTTCCTCTCAGGCACCTACAGAAATCCCAGGAAGGGAAGGGCTCCTTCTTACTCAGTaGTGTCATTCTTCTCTGGGT +
Preference number: 2 (lower is better)
Translates to: DPWPCSSQAPTEIPGREGLLLTQ*CHSSLG
Trigger: ACCCAGAGAAGAATGACAGCACTGAGTAAGAAGGAG...CCCTTCCCTTCCTGGGATTTCTGTAGGTGCCTGAGAGGAACATGGCCAGGGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR-3UTR CCA 90 bp AGATGGCAAAGCATTTCACGTACAGTGCGTTTCTCGACAAATCCCAGGGGCTTCCTGCCTGGAGAGCACTaGGGATTCTTGACTGGCTGG +
Preference number: 2 (lower is better)
Translates to: RWQSISRTVRFSTNPRGFLPGEH*GFLTGW
Trigger: CCAGCCAGTCAAGAATCCCCAGTGCTCTCCAGGCAG...GAAGCCCCTGGGATTTGTCGAGAAACGCACTGTACGTGAAATGCTTTGCCATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR-3UTR CCA 90 bp GCCCAAAGTTCGGGATGGTTTTGGGCAGGGGACAAGGAACATCCATCAGGGATCTCACAGGAGCGGAGATaGACAAGACACATGCGAATG +
Preference number: 2 (lower is better)
Translates to: AQSSGWFWAGDKEHPSGISQERR*TRHMRM
Trigger: CATTCGCATGTGTCTTGTCCATCTCCGCTCCTGTGA...GATCCCTGATGGATGTTCCTTGTCCCCTGCCCAAAACCATCCCGAACTTTGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR CAA 90 bp GGCAGACTAAGAAAGCAGATCTCCCACCACTCAGCCCAGGCCCCTTaGCTTCAAATCGTGTCTCAGAGGGAGAACAGTAGTTCCCCTTAT +
Preference number: 2 (lower is better)
Translates to: GRLRKQISHHSAQAP*LQIVSQRENSSSPY
Trigger: ATAAGGGGAACTACTGTTCTCCCTCTGAGACACGATTTGAAGCAAAGGGGCCTGGGCTGAGTGGTGGGAGATCTGCTTTCTTAGTCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
3UTR-3UTR TCA 90 bp CTCTCAGGCACCTACAGAAATCCCAGGAAGGGAAGGGTATGCGGCAGGGTGAAAACTAAGGAAGCAGTCTaGCTGGATCTGGAATCATCG +
Preference number: 2 (lower is better)
Translates to: LSGTYRNPRKGRVCGRVKTKEAV*LDLESS
Trigger: CGATGATTCCAGATCCAGTCAGACTGCTTCCTTAGT...TTTCACCCTGCCGCATACCCTTCCCTTCCTGGGATTTCTGTAGGTGCCTGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR-3UTR TCA 90 bp AGAAAAAGCTACGTCCGTCCTAGTACAATGCCTGGGCCACTCGGACTCGTCCGGAGCTATTGCAAAGGTTaGGTCCTCAATAGGAACTCC +
Preference number: 2 (lower is better)
Translates to: RKSYVRPSTMPGPLGLVRSYCKG*VLNRNS
Trigger: GGAGTTCCTATTGAGGACTCAACCTTTGCAATAGCT...CCGGACGAGTCCGAGTGGCCCAGGCATTGTACTAGGACGGACGTAGCTTTTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000640909.2
3UTR-3UTR GCA 90 bp AGATGGCAAAGCATTTCACGTACAGTGCGTTTCTCGACAAATCCCAGGGGCTTCGTCACGTCAACCTCCTaGTCACCTGGCACTCCTTCT +
Preference number: 2 (lower is better)
Translates to: RWQSISRTVRFSTNPRGFVTSTS*SPGTPS
Trigger: AGAAGGAGTGCCAGGTGAGCAGGAGGTTGACGTGAC...GAAGCCCCTGGGATTTGTCGAGAAACGCACTGTACGTGAAATGCTTTGCCATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR-3UTR GCA 90 bp GCCCAAAGTTCGGGATGGTTTTGGGCAGGGGACAAGGAACATCCATCAGGGATCAACCGGCACAAGTCATaGAACAAAACGAGGAGAGAG +
Preference number: 2 (lower is better)
Translates to: AQSSGWFWAGDKEHPSGINRHKS*NKTRRE
Trigger: CTCTCTCCTCGTTTTGTTGCATGACTTGTGCCGGTT...GATCCCTGATGGATGTTCCTTGTCCCCTGCCCAAAACCATCCCGAACTTTGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR-3UTR GCA 90 bp AGATGGCAAAGCATTTCACGTACAGTGCGTTTCTCGACAAATCCCAGGGGCTTCGGGAAGCTTAAGTCTTaGTCTGTGAAGGGGCCCAGG +
Preference number: 2 (lower is better)
Translates to: RWQSISRTVRFSTNPRGFGKLKS*SVKGPR
Trigger: CCTGGGCCCCTTCACAGAGCAAGACTTAAGCTTCCC...GAAGCCCCTGGGATTTGTCGAGAAACGCACTGTACGTGAAATGCTTTGCCATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR-3UTR GCA 90 bp ACTAAGAAAGCAGATCTCCCACCACTCAGCCCAGGCCCCTTTGCTTCAAATCGTTTGACTGAGTCAGCTTaGACTAGGGAGGCCAGAGCA +
Preference number: 2 (lower is better)
Translates to: TKKADLPPLSPGPFASNRLTESA*TREARA
Trigger: TGCTCTGGCCTCCCTAGTGCAAGCTGACTCAGTCAA...ACGATTTGAAGCAAAGGGGCCTGGGCTGAGTGGTGGGAGATCTGCTTTCTTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
3UTR-3UTR GCA 90 bp GGATTGATTATCTTTCAAGGATGCCTCTTCCATGCCAAGAACACGGATCTTGTGCCTGGCCCACTCCACTaGCCTCCTCAATCAGGGGAG +
Preference number: 2 (lower is better)
Translates to: GLIIFQGCLFHAKNTDLVPGPLH*PPQSGE
Trigger: CTCCCCTGATTGAGGAGGGCAGTGGAGTGGGCCAGG...CACAAGATCCGTGTTCTTGGCATGGAAGAGGCATCCTTGAAAGATAATCAATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638825.1
ENST00000675775.1
3UTR-3UTR CCA 90 bp TCGGACCAGAGCCCCATGATCAACTTTATGTGCTATGTGCAGGTTCTCATAAAAGGAAGGACCTCGAGCTaGGCAGCCCGAAATCAGGGC +
Preference number: 2 (lower is better)
Translates to: SDQSPMINFMCYVQVLIKGRTSS*AARNQG
Trigger: GCCCTGATTTCGGGCTGCCCAGCTCGAGGTCCTTCC...TTTTATGAGAACCTGCACATAGCACATAAAGTTGATCATGGGGCTCTGGTCCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR-3UTR CCA 90 bp AGCCACAGCACACAGGAGGAGACCAGATTGTCCCTGGGACAGACACACAGACTGTCCCACAGGAGTGCATaGGTTTTACAGGTTTTGTGT +
Preference number: 2 (lower is better)
Translates to: SHSTQEETRLSLGQTHRLSHRSA*VLQVLC
Trigger: ACACAAAACCTGTAAAACCCATGCACTCCTGTGGGA...CAGTCTGTGTGTCTGTCCCAGGGACAATCTGGTCTCCTCCTGTGTGCTGTGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR CAA 90 bp GGAGCTCAGGGGCAATCCCACAGGAGTGCATGGGTTTTACAGGTTTaGTGTCCTGGGATTAGCTGGTGTGCATGTCTGAACAAACACATC +
Preference number: 2 (lower is better)
Translates to: GAQGQSHRSAWVLQV*CPGISWCACLNKHI
Trigger: GATGTGTTTGTTCAGACATGCACACCAGCTAATCCCAGGACACAAAACCTGTAAAACCCATGCACTCCTGTGGGATTGCCCCTGAGCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR CAA 90 bp CAATATAAGAGAGGGCCTAGTGGTAGAAATGGTAAGTCTTGGGTATaGACTGAGTCAGCTTGCACTAGGGAGGCCAGAGCACAGGGGAGC +
Preference number: 2 (lower is better)
Translates to: QYKRGPSGRNGKSWV*TESACTREARAQGS
Trigger: GCTCCCCTGTGCTCTGGCCTCCCTAGTGCAAGCTGACTCAGTCAATACCCAAGACTTACCATTTCTACCACTAGGCCCTCTCTTATATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
3UTR-3UTR TCA 90 bp TCGGACCAGAGCCCCATGATCAACTTTATGTGCTATGTGCAGGTTCTCATAAAACAGGCTCTTGCCTGCTaGATTTGGCCGCCCAGCATC +
Preference number: 2 (lower is better)
Translates to: SDQSPMINFMCYVQVLIKQALAC*IWPPSI
Trigger: GATGCTGGGCGGCCAAATTCAGCAGGCAAGAGCCTG...TTTTATGAGAACCTGCACATAGCACATAAAGTTGATCATGGGGCTCTGGTCCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR-3UTR GCA 90 bp TGTAGGTGGGGACACTTCACCCTTAGCGCCTCCCAAAGACTCTGGCACCTAAGCGTTTGCCTTTGCTTTTaGATTCTGTTTTCTCCTGCG +
Preference number: 2 (lower is better)
Translates to: CRWGHFTLSASQRLWHLSVCLCF*ILFSPA
Trigger: CGCAGGAGAAAACAGAATGCAAAAGCAAAGGCAAAC...GCTTAGGTGCCAGAGTCTTTGGGAGGCGCTAAGGGTGAAGTGTCCCCACCTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000638825.1
3UTR-3UTR CCA 90 bp TGGGAGAGGGGAGGGAAACAGTATGGAGAGGACGCGGATGACGATGTGGGGGTTAAAGTGGTTGTACACTaGTTGGGATGTCTATATTGC +
Preference number: 2 (lower is better)
Translates to: WERGGKQYGEDADDDVGVKVVVH*LGCLYC
Trigger: GCAATATAGACATCCCAACCAGTGTACAACCACTTT...AACCCCCACATCGTCATCCGCGTCCTCTCCATACTGTTTCCCTCCCCTCTCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR-3UTR CCA 90 bp GGGAGAGACTGTGGAGCTCAGGGGCAATCCCACAGGAGTGCATGGGTTTTACAGCACAGAATAAGTCGATaGTATTCCATGGGTAGAGGT +
Preference number: 2 (lower is better)
Translates to: GRDCGAQGQSHRSAWVLQHRISR*YSMGRG
Trigger: ACCTCTACCCATGGAATACCATCGACTTATTCTGTG...CTGTAAAACCCATGCACTCCTGTGGGATTGCCCCTGAGCTCCACAGTCTCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR-3UTR CCA 90 bp GATTATCTTTCAAGGATGCCTCTTCCATGCCAAGAACACGGATCTTGTGTAGCTCTCCTCCTGCATTCCTaGGTACCCCTGCCTTGGGGT +
Preference number: 2 (lower is better)
Translates to: DYLSRMPLPCQEHGSCVALLLHS*VPLPWG
Trigger: ACCCCAAGGCAGGGGTACCCAGGAATGCAGGAGGAG...AGCTACACAAGATCCGTGTTCTTGGCATGGAAGAGGCATCCTTGAAAGATAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000638825.1
ENST00000675775.1
3UTR CAA 90 bp GGGGAAACTATGGCAGAGAGGGTAACTTGCTCAAGGAGGAGAACCTaGTCCTGGGTACTCTGCAGCTTAAGGACTTGGGTATCTAAAGAC +
Preference number: 2 (lower is better)
Translates to: GETMAERVTCSRRRT*SWVLCSLRTWVSKD
Trigger: GTCTTTAGATACCCAAGTCCTTAAGCTGCAGAGTACCCAGGACAAGGTTCTCCTCCTTGAGCAAGTTACCCTCTCTGCCATAGTTTCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
3UTR CAA 90 bp AGGACAATGGCCTTACCCCCAAGCCCTGAAGACATCTCTCTCTTCTaGCCTCTCCTCCCTCTGGCTTGTGGATTGATTATCTTTCAAGGA +
Preference number: 2 (lower is better)
Translates to: RTMALPPSPEDISLF*PLLPLACGLIIFQG
Trigger: TCCTTGAAAGATAATCAATCCACAAGCCAGAGGGAGGAGAGGCAAGAAGAGAGAGATGTCTTCAGGGCTTGGGGGTAAGGCCATTGTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000638825.1
ENST00000675775.1
3UTR-3UTR TCA 90 bp CTCTCTCTCCAGTGGGGACAGCCTAGCGTGCTGACTACAAAGAGACCTGGAGCATGGAAGCTTTCCTCTTaGTCTTGTGTACAAAAAGGA +
Preference number: 2 (lower is better)
Translates to: LSLQWGQPSVLTTKRPGAWKLSS*SCVQKG
Trigger: TCCTTTTTGTACACAAGATCAAGAGGAAAGCTTCCA...TGCTCCAGGTCTCTTTGTAGTCAGCACGCTAGGCTGTCCCCACTGGAGAGAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638825.1
3UTR-3UTR TCA 90 bp CACACTCCCTTCTGTGCTTCTGGCACCACAGTAAAGAGACTGTCTTGTCTGCTCAATATGACCGATGACTaGCCGACTGCCCTTTTTGGA +
Preference number: 2 (lower is better)
Translates to: HTPFCASGTTVKRLSCLLNMTDD*PTALFG
Trigger: TCCAAAAAGGGCAGTCGGTCAGTCATCGGTCATATT...GAGCAGACAAGACAGTCTCTTTACTGTGGTGCCAGAAGCACAGAAGGGAGTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638825.1
3UTR-3UTR TCA 90 bp TGGGGAAACTATGGCAGAGAGGGTAACTTGCTCAAGGAGGAGAACCTTGTCCTGGGGACACTAAGTCCATaGAAGAAACTCAGCTCTGCT +
Preference number: 2 (lower is better)
Translates to: WGNYGREGNLLKEENLVLGTLSP*KKLSSA
Trigger: AGCAGAGCTGAGTTTCTTTCATGGACTTAGTGTCCC...CAGGACAAGGTTCTCCTCCTTGAGCAAGTTACCCTCTCTGCCATAGTTTCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639495.1
3UTR-3UTR GCA 90 bp TCGGACCAGAGCCCCATGATCAACTTTATGTGCTATGTGCAGGTTCTCATAAAACCCCCTCTAGTCTTTTaGTCGGCAGCCGCTTCCATC +
Preference number: 2 (lower is better)
Translates to: SDQSPMINFMCYVQVLIKPPLVF*SAAASI
Trigger: GATGGAAGCGGCTGCCGAGCAAAAGACTAGAGGGGG...TTTTATGAGAACCTGCACATAGCACATAAAGTTGATCATGGGGCTCTGGTCCGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR-3UTR GCA 90 bp TGCCAAAAGGCTCCAGCTGCAGCCTGTCTCCATGAAGGCATAGAAGGGGACCATATTAAAGTGGGTTGGTaGTGGAAAGGATCTCAGAAG +
Preference number: 2 (lower is better)
Translates to: CQKAPAAACLHEGIEGDHIKVGW*WKGSQK
Trigger: CTTCTGAGATCCTTTCCAGCACCAACCCACTTTAAT...ATGGTCCCCTTCTATGCCTTCATGGAGACAGGCTGCAGCTGGAGCCTTTTGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
3UTR-3UTR GCA 90 bp GATTATCTTTCAAGGATGCCTCTTCCATGCCAAGAACACGGATCTTGTGTAGCTCCAGCAACCCACAGCTaGCAGGGCCTCAAGTTCTCT +
Preference number: 2 (lower is better)
Translates to: DYLSRMPLPCQEHGSCVAPATHS*QGLKFS
Trigger: AGAGAACTTGAGGCCCTGGCAGCTGTGGGTTGCTGG...AGCTACACAAGATCCGTGTTCTTGGCATGGAAGAGGCATCCTTGAAAGATAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638825.1
ENST00000675775.1
3UTR-3UTR GCA 90 bp GATTATCTTTCAAGGATGCCTCTTCCATGCCAAGAACACGGATCTTGTGTAGCTAGTCAAGGCTCCTCCTaGATTCCTGGGTACCCCTGC +
Preference number: 2 (lower is better)
Translates to: DYLSRMPLPCQEHGSCVASQGSS*IPGYPC
Trigger: GCAGGGGTACCCAGGAATGCAGGAGGAGCCTTGACT...AGCTACACAAGATCCGTGTTCTTGGCATGGAAGAGGCATCCTTGAAAGATAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638825.1
ENST00000675775.1
3UTR CAA 90 bp CAAATCGTGTCTCAGAGGGAGAACAGTAGTTCCCCTTATCTGCAGTaGCACTTTCTACAGTTTCTGTTACCTGCAGTCAGCCACAGTCCG +
Preference number: 2 (lower is better)
Translates to: QIVSQRENSSSPYLQ*HFLQFLLPAVSHSP
Trigger: CGGACTGTGGCTGACTGCAGGTAACAGAAACTGTAGAAAGTGCAACTGCAGATAAGGGGAACTACTGTTCTCCCTCTGAGACACGATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
3UTR CAA 90 bp CCACACTCCCTTCTGTGCTTCTGGCACCACAGTAAAGAGACTGTCTaGTCTGCTCTTTGGGGCCACACCAATCAGTCTAACATTCAAGAT +
Preference number: 2 (lower is better)
Translates to: PHSLLCFWHHSKETV*SALWGHTNQSNIQD
Trigger: ATCTTGAATGTTAGACTGATTGGTGTGGCCCCAAAGAGCAGACAAGACAGTCTCTTTACTGTGGTGCCAGAAGCACAGAAGGGAGTGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638825.1
3UTR-3UTR TCA 90 bp ATATACTTAGCAATGACAGGGCTTTCTTTGCAAAGATCCTTTCTCATTCCTCCATACTCTGTCCGAGGGTaGGGAGGGGCTGCAGGTCCA +
Preference number: 2 (lower is better)
Translates to: IYLAMTGLSLQRSFLIPPYSVRG*GGAAGP
Trigger: TGGACCTGCAGCCCCTCCTCACCCTCGGACAGAGTA...TGGAGGAATGAGAAAGGATCTTTGCAAAGAAAGCCCTGTCATTGCTAAGTATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638366.1
3UTR-3UTR TCA 90 bp GGAGCAGTTGTGAATGACCATAGGCTGCACCAACTGTTGCTTTCAAAAACCCAGGGTCAATATGACCGATaGCTGACCGACTGCCCTTTT +
Preference number: 2 (lower is better)
Translates to: GAVVNDHRLHQLLLSKTQGQYDR*LTDCPF
Trigger: AAAAGGGCAGTCGGTCAGTCATCGGTCATATTGACC...CTGGGTTTTTGAAAGCAACAGTTGGTGCAGCCTATGGTCATTCACAACTGCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638825.1
3UTR-3UTR TCA 90 bp AGATGGCAAAGCATTTCACGTACAGTGCGTTTCTCGACAAATCCCAGGGGCTTCCTCAACCCTAACCTTTaGGGAGGGACTAATGATTGG +
Preference number: 2 (lower is better)
Translates to: RWQSISRTVRFSTNPRGFLNPNL*GGTNDW
Trigger: CCAATCATTAGTCCCTCCTCAAAGGTTAGGGTTGAG...GAAGCCCCTGGGATTTGTCGAGAAACGCACTGTACGTGAAATGCTTTGCCATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR-3UTR TCA 90 bp TCTAGAGAGAGCCTGCAAAGTACAGATGACCATGGTATACTTGGGAATGTTGGGGATATGTTTCAGTTGTaGGCCAGCCAGAGGACCTGC +
Preference number: 2 (lower is better)
Translates to: SRESLQSTDDHGILGNVGDMFQL*ASQRTC
Trigger: GCAGGTCCTCTGGCTGGCTCACAACTGAAACATATC...CCCAACATTCCCAAGTATACCATGGTCATCTGTACTTTGCAGGCTCTCTCTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
3UTR-3UTR TCA 90 bp AAGAGAGGGCCTAGTGGTAGAAATGGTAAGTCTTGGGTATTGACTGAGTCAGCTGATATGTTTCAGTTGTaGGCCAGCCAGAGGACCTGC +
Preference number: 2 (lower is better)
Translates to: KRGPSGRNGKSWVLTESADMFQL*ASQRTC
Trigger: GCAGGTCCTCTGGCTGGCTCACAACTGAAACATATC...AGCTGACTCAGTCAATACCCAAGACTTACCATTTCTACCACTAGGCCCTCTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
3UTR-3UTR TCA 90 bp AGAGGGCCTAGTGGTAGAAATGGTAAGTCTTGGGTATTGACTGAGTCAGCTTGCGGGCAGCAGAGATATTaGCAGAGGGTAAAGGATGAG +
Preference number: 2 (lower is better)
Translates to: RGPSGRNGKSWVLTESACGQQRY*QRVKDE
Trigger: CTCATCCTTTACCCTCTGTCAATATCTCTGCTGCCC...GCAAGCTGACTCAGTCAATACCCAAGACTTACCATTTCTACCACTAGGCCCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
3UTR-3UTR TCA 90 bp TGGGGAAACTATGGCAGAGAGGGTAACTTGCTCAAGGAGGAGAACCTTGTCCTGGTAAGTCTTGGGTATTaGCTGAGTCAGCTTGCACTA +
Preference number: 2 (lower is better)
Translates to: WGNYGREGNLLKEENLVLVSLGY*LSQLAL
Trigger: TAGTGCAAGCTGACTCAGTCAATACCCAAGACTTAC...CAGGACAAGGTTCTCCTCCTTGAGCAAGTTACCCTCTCTGCCATAGTTTCCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
3UTR-3UTR CCA 90 bp CAAGTCACTCTCACAGCCTCTGTCGGCATATACTTAGCAATGACAGGGCTTTCTTCCGGCAAACCTGCATaGCGTGAATTTACTCTGTCC +
Preference number: 2 (lower is better)
Translates to: QVTLTASVGIYLAMTGLSSGKPA*REFTLS
Trigger: GGACAGAGTAAATTCACGCCATGCAGGTTTGCCGGA...AGAAAGCCCTGTCATTGCTAAGTATATGCCGACAGAGGCTGTGAGAGTGACTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638366.1
ENST00000638825.1
3UTR-3UTR CCA 90 bp TCAAGTCACTCTCACAGCCTCTGTCGGCATATACTTAGCAATGACAGGGCTTTCTCCGGCAAACCTGCATaGCGTGAATTTACTCTGTCC +
Preference number: 2 (lower is better)
Translates to: SSHSHSLCRHILSNDRAFSGKPA*REFTLS
Trigger: GGACAGAGTAAATTCACGCCATGCAGGTTTGCCGGA...GAAAGCCCTGTCATTGCTAAGTATATGCCGACAGAGGCTGTGAGAGTGACTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638366.1
ENST00000638825.1
3UTR-3UTR CCA 90 bp ATATTTATTCGAGATGCAGAAGTGTGTCTCTGCAAACCTCCGACTGCTTCAGGATGGGGAGACATCCGCTaGGTCACAAGCATGCCAAAC +
Preference number: 2 (lower is better)
Translates to: IFIRDAEVCLCKPPTASGWGDIR*VTSMPN
Trigger: GTTTGGCATGCTTGTGACCCAGCGGATGTCTCCCCA...TCCTGAAGCAGTCGGAGGTTTGCAGAGACACACTTCTGCATCTCGAATAAATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265969.8
3UTR-3UTR CCA 90 bp AGACTAAATGCCACCTGTCACGTCAACCTCCTGCTCACCTGGCACTCCTTCTTAGAATTCACGGGAAAGTaGTTGTACACTGGTTGGGAT +
Preference number: 2 (lower is better)
Translates to: RLNATCHVNLLLTWHSFLEFTGK*LYTGWD
Trigger: ATCCCAACCAGTGTACAACCACTTTCCCGTGAATTC...TAAGAAGGAGTGCCAGGTGAGCAGGAGGTTGACGTGACAGGTGGCATTTAGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR-3UTR CCA 90 bp GATTATCTTTCAAGGATGCCTCTTCCATGCCAAGAACACGGATCTTGTGTAGCTTGGGTACCCCTGCCTTaGGGTCATGGCCTAAAGTCA +
Preference number: 2 (lower is better)
Translates to: DYLSRMPLPCQEHGSCVAWVPLP*GHGLKS
Trigger: TGACTTTAGGCCATGACCCCAAGGCAGGGGTACCCA...AGCTACACAAGATCCGTGTTCTTGGCATGGAAGAGGCATCCTTGAAAGATAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638825.1
ENST00000675775.1
3UTR-3UTR TCA 90 bp ATCCTCTACGGTCAGTTACCATTTGGCCGTAGAAAAAGCTACGTCCGTCCTAGTTGTACAGGTTTCTACTaGACGCCGTTACAGTTTGGC +
Preference number: 2 (lower is better)
Translates to: ILYGQLPFGRRKSYVRPSCTGFY*TPLQFG
Trigger: GCCAAACTGTAACGGCGTTCAGTAGAAACCTGTACA...ACTAGGACGGACGTAGCTTTTTCTACGGCCAAATGGTAACTGACCGTAGAGGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000638825.1
3UTR-3UTR TCA 90 bp TGCCCACACTGCAGAATAACCTTTGTCCATTCTAGAGAGAGCCTGCAAAGTACAGGGCAGCAGAGATATTaGCAGAGGGTAAAGGATGAG +
Preference number: 2 (lower is better)
Translates to: CPHCRITFVHSRESLQSTGQQRY*QRVKDE
Trigger: CTCATCCTTTACCCTCTGTCAATATCTCTGCTGCCC...TGTACTTTGCAGGCTCTCTCTAGAATGGACAAAGGTTATTCTGCAGTGTGGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
3UTR-3UTR TCA 90 bp CAGAGGGAGAACAGTAGTTCCCCTTATCTGCAGTTGCACTTTCTACAGTTTCTGGGGCAGCAGAGATATTaGCAGAGGGTAAAGGATGAG +
Preference number: 2 (lower is better)
Translates to: QRENSSSPYLQLHFLQFLGQQRY*QRVKDE
Trigger: CTCATCCTTTACCCTCTGTCAATATCTCTGCTGCCC...CAGAAACTGTAGAAAGTGCAACTGCAGATAAGGGGAACTACTGTTCTCCCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
3UTR-3UTR GCA 90 bp AGAGGGCCTAGTGGTAGAAATGGTAAGTCTTGGGTATTGACTGAGTCAGCTTGCCGTGATGAAATCTCATaGCATGTCACTCCATCCCAC +
Preference number: 2 (lower is better)
Translates to: RGPSGRNGKSWVLTESACRDEIS*HVTPSH
Trigger: GTGGGATGGAGTGACATGGCATGAGATTTCATCACG...GCAAGCTGACTCAGTCAATACCCAAGACTTACCATTTCTACCACTAGGCCCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
3UTR-3UTR GCA 90 bp GGATGTGGTTTTCAGTATCTTGCATTACAGGACCACATCTGTGCCCACACTGCAACAGTTTCTGTTACCTaGAGTCAGCCACAGTCCGAA +
Preference number: 2 (lower is better)
Translates to: GCGFQYLALQDHICAHTATVSVT*SQPQSE
Trigger: TTCGGACTGTGGCTGACTGCAGGTAACAGAAACTGT...TGCAGTGTGGGCACAGATGTGGTCCTGTAATGCAAGATACTGAAAACCACATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
3UTR-3UTR CCA 90 bp GAAACTATGGCAGAGAGGGTAACTTGCTCAAGGAGGAGAACCTTGTCCTGGGTACCTTTAAATTGTCAGTaGGATAGGCAGTGGGGTAGT +
Preference number: 2 (lower is better)
Translates to: ETMAERVTCSRRRTLSWVPLNCQ*DRQWGS
Trigger: ACTACCCCACTGCCTATCCCACTGACAATTTAAAGG...TACCCAGGACAAGGTTCTCCTCCTTGAGCAAGTTACCCTCTCTGCCATAGTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
3UTR CAA 90 bp AAATTATTCAGTAACAGATTGTTAAGAGCTGCAAAGGGGTCTCTTTaGGCTGCCAAAAGGCTCCAGCTGCAGCCTGTCTCCATGAAGGCA +
Preference number: 2 (lower is better)
Translates to: KLFSNRLLRAAKGSL*AAKRLQLQPVSMKA
Trigger: TGCCTTCATGGAGACAGGCTGCAGCTGGAGCCTTTTGGCAGCCAAAAGAGACCCCTTTGCAGCTCTTAACAATCTGTTACTGAATAATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
3UTR-3UTR TCA 90 bp ACAGCTGGCTTTTCTGCCCTGGTCTCCAGGCACCGCCAAAGTACTTACTGTTCAGAAAGAGAGAAAATGTaGACAACACGGAAAAGAACA +
Preference number: 2 (lower is better)
Translates to: TAGFSALVSRHRQSTYCSEREKM*TTRKRT
Trigger: TGTTCTTTTCCGTGTTGTTCACATTTTCTCTCTTTC...TGAACAGTAAGTACTTTGGCGGTGCCTGGAGACCAGGGCAGAAAAGCCAGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR-3UTR GCA 90 bp CAGAGGGAGAACAGTAGTTCCCCTTATCTGCAGTTGCACTTTCTACAGTTTCTGCGTGATGAAATCTCATaGCATGTCACTCCATCCCAC +
Preference number: 2 (lower is better)
Translates to: QRENSSSPYLQLHFLQFLRDEIS*HVTPSH
Trigger: GTGGGATGGAGTGACATGGCATGAGATTTCATCACG...CAGAAACTGTAGAAAGTGCAACTGCAGATAAGGGGAACTACTGTTCTCCCTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
3UTR-3UTR GCA 90 bp TGCCCACACTGCAGAATAACCTTTGTCCATTCTAGAGAGAGCCTGCAAAGTACAACAGTTTCTGTTACCTaGAGTCAGCCACAGTCCGAA +
Preference number: 2 (lower is better)
Translates to: CPHCRITFVHSRESLQSTTVSVT*SQPQSE
Trigger: TTCGGACTGTGGCTGACTGCAGGTAACAGAAACTGT...TGTACTTTGCAGGCTCTCTCTAGAATGGACAAAGGTTATTCTGCAGTGTGGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
3UTR-3UTR GCA 90 bp AAGAGAGGGCCTAGTGGTAGAAATGGTAAGTCTTGGGTATTGACTGAGTCAGCTTTGTCCTGGGTACTCTaGAGCTTAAGGACTTGGGTA +
Preference number: 2 (lower is better)
Translates to: KRGPSGRNGKSWVLTESALSWVL*SLRTWV
Trigger: TACCCAAGTCCTTAAGCTGCAGAGTACCCAGGACAA...AGCTGACTCAGTCAATACCCAAGACTTACCATTTCTACCACTAGGCCCTCTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
3UTR-3UTR CCA 90 bp AAGAAGGCAGCCGTGCGAGTTTCCACAATTCTATTTGGAGCAAAGTTCTCAGTTTCCGGCAAACCTGCATaGCGTGAATTTACTCTGTCC +
Preference number: 2 (lower is better)
Translates to: KKAAVRVSTILFGAKFSVSGKPA*REFTLS
Trigger: GGACAGAGTAAATTCACGCCATGCAGGTTTGCCGGA...AACTGAGAACTTTGCTCCAAATAGAATTGTGGAAACTCGCACGGCTGCCTTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000638825.1
3UTR-3UTR CCA 90 bp TCTGCAGTTGCACTTTCTACAGTTTCTGTTACCTGCAGTCAGCCACAGTCCGAACCTTTAAATTGTCAGTaGGATAGGCAGTGGGGTAGT +
Preference number: 2 (lower is better)
Translates to: SAVALSTVSVTCSQPQSEPLNCQ*DRQWGS
Trigger: ACTACCCCACTGCCTATCCCACTGACAATTTAAAGG...TTCGGACTGTGGCTGACTGCAGGTAACAGAAACTGTAGAAAGTGCAACTGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
3UTR-3UTR TCA 90 bp ATCCTCTACGGTCAGTTACCATTTGGCCGTAGAAAAAGCTACGTCCGTCCTAGTTTCTCAGTTTCCACGTaGGAGATGAACTATGAAGGT +
Preference number: 2 (lower is better)
Translates to: ILYGQLPFGRRKSYVRPSFSVST*EMNYEG
Trigger: ACCTTCATAGTTCATCTCTCACGTGGAAACTGAGAA...ACTAGGACGGACGTAGCTTTTTCTACGGCCAAATGGTAACTGACCGTAGAGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000638825.1
3UTR-3UTR TCA 90 bp AAGAGAGGGCCTAGTGGTAGAAATGGTAAGTCTTGGGTATTGACTGAGTCAGCTGTAAGTCTTGGGTATTaGCTGAGTCAGCTTGCACTA +
Preference number: 2 (lower is better)
Translates to: KRGPSGRNGKSWVLTESAVSLGY*LSQLAL
Trigger: TAGTGCAAGCTGACTCAGTCAATACCCAAGACTTAC...AGCTGACTCAGTCAATACCCAAGACTTACCATTTCTACCACTAGGCCCTCTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
3UTR-3UTR GCA 90 bp TGCCCACACTGCAGAATAACCTTTGTCCATTCTAGAGAGAGCCTGCAAAGTACACAGATTGTTAAGAGCTaGAAAGGGGTCTCTTTTGGC +
Preference number: 2 (lower is better)
Translates to: CPHCRITFVHSRESLQSTQIVKS*KGVSFG
Trigger: GCCAAAAGAGACCCCTTTGCAGCTCTTAACAATCTG...TGTACTTTGCAGGCTCTCTCTAGAATGGACAAAGGTTATTCTGCAGTGTGGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
3UTR-3UTR GCA 90 bp TCTAGAGAGAGCCTGCAAAGTACAGATGACCATGGTATACTTGGGAATGTTGGGCAGATTGTTAAGAGCTaGAAAGGGGTCTCTTTTGGC +
Preference number: 2 (lower is better)
Translates to: SRESLQSTDDHGILGNVGQIVKS*KGVSFG
Trigger: GCCAAAAGAGACCCCTTTGCAGCTCTTAACAATCTG...CCCAACATTCCCAAGTATACCATGGTCATCTGTACTTTGCAGGCTCTCTCTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
3UTR-3UTR CCA 90 bp AGTAGCGTGATGAAATCTCATGCCATGTCACTCCATCCCACCCAGAACATGAATATAAAGATAATACTCTaGCTCTCCTACTCCCCCGCT +
Preference number: 2 (lower is better)
Translates to: SSVMKSHAMSLHPTQNMNIKIIL*LSYSPA
Trigger: AGCGGGGGAGTAGGAGAGCCAGAGTATTATCTTTAT...ATTCATGTTCTGGGTGGGATGGAGTGACATGGCATGAGATTTCATCACGCTACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000639495.1
3UTR-3UTR CCA 90 bp GGATTGATTATCTTTCAAGGATGCCTCTTCCATGCCAAGAACACGGATCTTGTGAGATCACTTTGCCTTTaGGACTTGACCTGCCATCTG +
Preference number: 2 (lower is better)
Translates to: GLIIFQGCLFHAKNTDLVRSLCL*DLTCHL
Trigger: CAGATGGCAGGTCAAGTCCCAAAGGCAAAGTGATCT...CACAAGATCCGTGTTCTTGGCATGGAAGAGGCATCCTTGAAAGATAATCAATCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638825.1
ENST00000675775.1
3UTR-3UTR CCA 90 bp GATTATCTTTCAAGGATGCCTCTTCCATGCCAAGAACACGGATCTTGTGTAGCTAGATCACTTTGCCTTTaGGACTTGACCTGCCATCTG +
Preference number: 2 (lower is better)
Translates to: DYLSRMPLPCQEHGSCVARSLCL*DLTCHL
Trigger: CAGATGGCAGGTCAAGTCCCAAAGGCAAAGTGATCT...AGCTACACAAGATCCGTGTTCTTGGCATGGAAGAGGCATCCTTGAAAGATAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638825.1
ENST00000675775.1
3UTR CAA 90 bp CTCACCCCCAGAAATGTACAGGTTTCTACTGAACGCCGTTACAGTTaGGCTCCAACAACGTGTGTGAAAGTCAAGAGCTTTGAAAGAAAA +
Preference number: 2 (lower is better)
Translates to: LTPRNVQVSTERRYS*APTTCVKVKSFERK
Trigger: TTTTCTTTCAAAGCTCTTGACTTTCACACACGTTGTTGGAGCCAAACTGTAACGGCGTTCAGTAGAAACCTGTACATTTCTGGGGGTGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000638825.1
3UTR-3UTR GCA 90 bp CAGAGGGAGAACAGTAGTTCCCCTTATCTGCAGTTGCACTTTCTACAGTTTCTGAAAGAAACTCAGCTCTaGTCCTTCCTAGCAATGCAA +
Preference number: 2 (lower is better)
Translates to: QRENSSSPYLQLHFLQFLKETQL*SFLAMQ
Trigger: TTGCATTGCTAGGAAGGAGCAGAGCTGAGTTTCTTT...CAGAAACTGTAGAAAGTGCAACTGCAGATAAGGGGAACTACTGTTCTCCCTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639495.1
3UTR-3UTR CCA 90 bp TCTGCAGTTGCACTTTCTACAGTTTCTGTTACCTGCAGTCAGCCACAGTCCGAAAGAAATGGTAAGTCTTaGGTATTGACTGAGTCAGCT +
Preference number: 2 (lower is better)
Translates to: SAVALSTVSVTCSQPQSERNGKS*VLTESA
Trigger: AGCTGACTCAGTCAATACCCAAGACTTACCATTTCT...TTCGGACTGTGGCTGACTGCAGGTAACAGAAACTGTAGAAAGTGCAACTGCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
3UTR-3UTR TCA 90 bp CAAAGGATGATGAATTCAGGATCTAAAGGGTGGAATATGAAAAGAAGTCAACAAGATATGTTTCAGTTGTaGGCCAGCCAGAGGACCTGC +
Preference number: 2 (lower is better)
Translates to: QRMMNSGSKGWNMKRSQQDMFQL*ASQRTC
Trigger: GCAGGTCCTCTGGCTGGCTCACAACTGAAACATATC...TTGTTGACTTCTTTTCATATTCCACCCTTTAGATCCTGAATTCATCATCCTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
3UTR-3UTR GCA 90 bp GAGAGCCTGCAAAGTACAGATGACCATGGTATACTTGGGAATGTTGGGTTTATAGTAGTTCCCCTTATCTaGAGTTGCACTTTCTACAGT +
Preference number: 2 (lower is better)
Translates to: ESLQSTDDHGILGNVGFIVVPLI*SCTFYS
Trigger: ACTGTAGAAAGTGCAACTGCAGATAAGGGGAACTAC...TATAAACCCAACATTCCCAAGTATACCATGGTCATCTGTACTTTGCAGGCTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
3UTR-3UTR GCA 90 bp AATATTCAAGTCTTAGAAGGGGCAGTGATATGTTTCAGTTGTGAGCCAGCCAGAATTAAAGTGGGTTGGTaGTGGAAAGGATCTCAGAAG +
Preference number: 2 (lower is better)
Translates to: NIQVLEGAVICFSCEPARIKVGW*WKGSQK
Trigger: CTTCTGAGATCCTTTCCAGCACCAACCCACTTTAAT...TCTGGCTGGCTCACAACTGAAACATATCACTGCCCCTTCTAAGACTTGAATATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
3UTR-3UTR GCA 90 bp AATATTCAAGTCTTAGAAGGGGCAGTGATATGTTTCAGTTGTGAGCCAGCCAGAATTCTAGAGAGAGCCTaGAAAGTACAGATGACCATG +
Preference number: 2 (lower is better)
Translates to: NIQVLEGAVICFSCEPARILERA*KVQMTM
Trigger: CATGGTCATCTGTACTTTGCAGGCTCTCTCTAGAAT...TCTGGCTGGCTCACAACTGAAACATATCACTGCCCCTTCTAAGACTTGAATATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
3UTR-3UTR CCA 90 bp GCTTTCCTCTTGATCTTGTGTACAAAAAGGAAGCAATCCATTCCCCATCTCTGTGAAAGTTGGTCACACTaGATCTACACACCGATAAGA +
Preference number: 2 (lower is better)
Translates to: AFLLILCTKRKQSIPHLCESWSH*IYTPIR
Trigger: TCTTATCGGTGTGTAGATCCAGTGTGACCAACTTTC...ACAGAGATGGGGAATGGATTGCTTCCTTTTTGTACACAAGATCAAGAGGAAAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000638825.1
3UTR-3UTR CCA 90 bp TCTGCAGTTGCACTTTCTACAGTTTCTGTTACCTGCAGTCAGCCACAGTCCGAATCAGGATCTAAAGGGTaGAATATGAAAAGAAGTCAA +
Preference number: 2 (lower is better)
Translates to: SAVALSTVSVTCSQPQSESGSKG*NMKRSQ
Trigger: TTGACTTCTTTTCATATTCCACCCTTTAGATCCTGA...TTCGGACTGTGGCTGACTGCAGGTAACAGAAACTGTAGAAAGTGCAACTGCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
3UTR-3UTR TCA 90 bp GATGACCATGGTATACTTGGGAATGTTGGGTTTATAGAATTAAAGTGGGTTGGTGGCAGTGGGGTAGTCTaGAGACATTCCTATAAAAGA +
Preference number: 2 (lower is better)
Translates to: DDHGILGNVGFIELKWVGGSGVV*RHSYKR
Trigger: TCTTTTATAGGAATGTCTTCAGACTACCCCACTGCC...ACCAACCCACTTTAATTCTATAAACCCAACATTCCCAAGTATACCATGGTCATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
3UTR-3UTR TCA 90 bp TCTACAGTTTCTGTTACCTGCAGTCAGCCACAGTCCGAAAATACTCAATGGAAACAATGCAACGTTGAGTaGATTATAACCTCCTTGAAC +
Preference number: 2 (lower is better)
Translates to: STVSVTCSQPQSENTQWKQCNVE*IITSLN
Trigger: GTTCAAGGAGGTTATAATTCACTCAACGTTGCATTG...TTTCCATTGAGTATTTTCGGACTGTGGCTGACTGCAGGTAACAGAAACTGTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639495.1
3UTR-3UTR TCA 90 bp CATTCTAGAGAGAGCCTGCAAAGTACAGATGACCATGGTATACTTGGGAATGTTCTAGCAATGCAACGTTaGGTGAATTATAACCTCCTT +
Preference number: 2 (lower is better)
Translates to: HSRESLQSTDDHGILGNVLAMQR*VNYNLL
Trigger: AAGGAGGTTATAATTCACTCAACGTTGCATTGCTAG...AACATTCCCAAGTATACCATGGTCATCTGTACTTTGCAGGCTCTCTCTAGAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639495.1
3UTR-3UTR CCA 90 bp TCTACAGTTTCTGTTACCTGCAGTCAGCCACAGTCCGAAAATACTCAATGGAAATCAGGATCTAAAGGGTaGAATATGAAAAGAAGTCAA +
Preference number: 2 (lower is better)
Translates to: STVSVTCSQPQSENTQWKSGSKG*NMKRSQ
Trigger: TTGACTTCTTTTCATATTCCACCCTTTAGATCCTGA...TTTCCATTGAGTATTTTCGGACTGTGGCTGACTGCAGGTAACAGAAACTGTAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
3UTR CAA 90 bp AATTTTAGAATCAGACCAAAGCCAAGCTACTGTCCTCTGTTTCTGTaGGGAAAATACTATATTTATTCGAGATGCAGAAGTGTGTCTCTG +
Preference number: 2 (lower is better)
Translates to: NFRIRPKPSYCPLFL*GKYYIYSRCRSVSL
Trigger: CAGAGACACACTTCTGCATCTCGAATAAATATAGTATTTTCCCAACAGAAACAGAGGACAGTAGCTTGGCTTTGGTCTGATTCTAAAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265969.8
3UTR-3UTR GCA 90 bp CAAAGGATGATGAATTCAGGATCTAAAGGGTGGAATATGAAAAGAAGTCAACAAGTAGTTCCCCTTATCTaGAGTTGCACTTTCTACAGT +
Preference number: 2 (lower is better)
Translates to: QRMMNSGSKGWNMKRSQQVVPLI*SCTFYS
Trigger: ACTGTAGAAAGTGCAACTGCAGATAAGGGGAACTAC...TTGTTGACTTCTTTTCATATTCCACCCTTTAGATCCTGAATTCATCATCCTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
3UTR GCA 72 bp TCCCGAAGGCTGGCAGCCCTCCGCCATGCAGCACCATaGGGGGAGTTGCGCACCGTGCCCCGGCTCAAAGGA +
Preference number: 3 (lower is better)
Translates to: SRRLAALRHAAP*GELRTVPRLKG
Trigger: TCCTTTGAGCCGGGGCACGGTGCGCAACTCCCCGCATGGTGCTGCATGGCGGAGGGCTGCCAGCCTTCGGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638825.1
3UTR CCA 72 bp GGCAGGCCCTCATCGGGAGTGAGGGCCTGGTCTATGTaGGGGCAGTCTTCGTTCGCCAGCGCGGCCTTCGCC +
Preference number: 3 (lower is better)
Translates to: GRPSSGVRAWSM*GQSSFASAAFA
Trigger: GGCGAAGGCCGCGCTGGCGAACGAAGACTGCCCCCACATAGACCAGGCCCTCACTCCCGATGAGGGCCTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638366.1
3UTR CCA 72 bp GGGAACATCAGGCCCATCCATGGCCGGTGCCAAGGATaGGACCCTCCCGAAGGCTGGCAGCCCTCCGCCATG +
Preference number: 3 (lower is better)
Translates to: GNIRPIHGRCQG*DPPEGWQPSAM
Trigger: CATGGCGGAGGGCTGCCAGCCTTCGGGAGGGTCCCATCCTTGGCACCGGCCATGGATGGGCCTGATGTTCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638825.1
3UTR GCA 72 bp AGGGTGCTGACCACACCCTGGGCAGAGGCCTGTGGGTaGTGCGGATGGAAGGGGCAGGACCGTCCTGCTCAA +
Preference number: 3 (lower is better)
Translates to: RVLTTPWAEACG*CGWKGQDRPAQ
Trigger: TTGAGCAGGACGGTCCTGCCCCTTCCATCCGCAGCACCCACAGGCCTCTGCCCAGGGTGTGGTCAGCACCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638825.1
3UTR CCA 72 bp TGGTGCCGCCTGAGACCCTTCTCTGGCTCTGAATGCTaGGCCCCCGCCCACTGGTTCTGTCCACAAGCCCCC +
Preference number: 3 (lower is better)
Translates to: WCRLRPFSGSEC*APAHWFCPQAP
Trigger: GGGGGCTTGTGGACAGAACCAGTGGGCGGGGGCCCAGCATTCAGAGCCAGAGAAGGGTCTCAGGCGGCACCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR CCA 72 bp GCTCGCAGACACGCTGGTCCTGCCTCCCACTCTGGCTaGCCCAGTCTTCCATCCAAGGGTCTCCGGGCTGAG +
Preference number: 3 (lower is better)
Translates to: ARRHAGPASHSG*PSLPSKGLRAE
Trigger: CTCAGCCCGGAGACCCTTGGATGGAAGACTGGGCCAGCCAGAGTGGGAGGCAGGACCAGCGTGTCTGCGAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR CCA 72 bp GTGTGCTCGCAGACACGCTGGTCCTGCCTCCCACTCTaGCTGGCCCAGTCTTCCATCCAAGGGTCTCCGGGC +
Preference number: 3 (lower is better)
Translates to: VCSQTRWSCLPL*LAQSSIQGSPG
Trigger: GCCCGGAGACCCTTGGATGGAAGACTGGGCCAGCCAGAGTGGGAGGCAGGACCAGCGTGTCTGCGAGCACAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR CCA 72 bp CGCGTAAAGGGCAGGCCCTCATCGGGAGTGAGGGCCTaGTCTATGTGGGGGCAGTCTTCGTTCGCCAGCGCG +
Preference number: 3 (lower is better)
Translates to: RVKGRPSSGVRA*SMWGQSSFASA
Trigger: CGCGCTGGCGAACGAAGACTGCCCCCACATAGACCAGGCCCTCACTCCCGATGAGGGCCTGCCCTTTACGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638366.1
3UTR TCA 72 bp CCGCCCCCACTCTGTCCCAACACCGGGTCAGTAGCCTaGGTCAGAGACTCACACCGGACTCCTGCCCCACCA +
Preference number: 3 (lower is better)
Translates to: PPPLCPNTGSVA*VRDSHRTPAPP
Trigger: TGGTGGGGCAGGAGTCCGGTGTGAGTCTCTGACTCAGGCTACTGACCCGGTGTTGGGACAGAGTGGGGGCGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR CCA 72 bp CTCTTGCCTGCTGAATTTGGCCGCCCAGCATCTCCCTaGGCCCCCAGGCTCCACACCTCCAGACTGAGTGCG +
Preference number: 3 (lower is better)
Translates to: LLPAEFGRPASP*APRLHTSRLSA
Trigger: CGCACTCAGTCTGGAGGTGTGGAGCCTGGGGGCCCAGGGAGATGCTGGGCGGCCAAATTCAGCAGGCAAGAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR CCA 72 bp GGCCTGCCTGGAGAGCACTGGGGATTCTTGACTGGCTaGCCCAGGGCACCTGTGCTTGGGGCAACACTCCTG +
Preference number: 3 (lower is better)
Translates to: GLPGEHWGFLTG*PRAPVLGATLL
Trigger: CAGGAGTGTTGCCCCAAGCACAGGTGCCCTGGGCCAGCCAGTCAAGAATCCCCAGTGCTCTCCAGGCAGGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR CCA 72 bp TGGCAGGACGGAGGAGGCATTGTGGGCTGTCCAGAGTaGGCGGTCTGGGCATCCGACTGCAGATGCAGGAGG +
Preference number: 3 (lower is better)
Translates to: WQDGGGIVGCPE*AVWASDCRCRR
Trigger: CCTCCTGCATCTGCAGTCGGATGCCCAGACCGCCCACTCTGGACAGCCCACAATGCCTCCTCCGTCCTGCCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR-3UTR CAA 90 bp TGTAGGTGGGGACACTTCACCCTTAGCGCCTCCCAAAGACTCTGGCACCTAAGCCCAGTGCCTGGAGCCTaGAGCTCGGGCGCCCTGGGC +
Preference number: 3 (lower is better)
Translates to: CRWGHFTLSASQRLWHLSPVPGA*SSGALG
Trigger: GCCCAGGGCGCCCGAGCTCAAGGCTCCAGGCACTGG...GCTTAGGTGCCAGAGTCTTTGGGAGGCGCTAAGGGTGAAGTGTCCCCACCTACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638825.1
3UTR TCA 72 bp AGGTTAGCTCCCAGGGAGCCCAGGCGGGGGCTTCTCTaGGACCTCACTGCTGTTCTAGGTGCCATGGGCAGG +
Preference number: 3 (lower is better)
Translates to: RLAPREPRRGLL*DLTAVLGAMGR
Trigger: CCTGCCCATGGCACCTAGAACAGCAGTGAGGTCTCAGAGAAGCCCCCGCCTGGGCTCCCTGGGAGCTAACCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR GCA 72 bp CCCAGGGGCACCAGTGAGGTTCCTCTAGCAGGCTCTTaGCTGCTGAATTTGGCCGCCCAGCATCTCCCTGGG +
Preference number: 3 (lower is better)
Translates to: PRGTSEVPLAGS*LLNLAAQHLPG
Trigger: CCCAGGGAGATGCTGGGCGGCCAAATTCAGCAGGCAAGAGCCTGCTAGAGGAACCTCACTGGTGCCCCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR GCA 72 bp GAGACAGGCTCTGCCGGGGGTGAGAACCCTTGCACCTaGCTTTGCAAGGGACCCTCCTGCCCAGATCCCATG +
Preference number: 3 (lower is better)
Translates to: ETGSAGGENPCT*LCKGPSCPDPM
Trigger: CATGGGATCTGGGCAGGAGGGTCCCTTGCAAAGGCAGGTGCAAGGGTTCTCACCCCCGGCAGAGCCTGTCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR GCA 72 bp AGATGGTGCCGCCTGAGACCCTTCTCTGGCTCTGAATaGTGGGCCCCCGCCCACTGGTTCTGTCCACAAGCC +
Preference number: 3 (lower is better)
Translates to: RWCRLRPFSGSE*WAPAHWFCPQA
Trigger: GGCTTGTGGACAGAACCAGTGGGCGGGGGCCCAGCATTCAGAGCCAGAGAAGGGTCTCAGGCGGCACCATCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR GCA 72 bp ACGAGCTGCCCAGCCAGTCTGCTGCACCAAGAAAGGTaGCCTCTGCCTTCTAGGTCCGGGCCAGTGCCTGGA +
Preference number: 3 (lower is better)
Translates to: TSCPASLLHQER*PLPSRSGPVPG
Trigger: TCCAGGCACTGGCCCGGACCTAGAAGGCAGAGGGCACCTTTCTTGGTGCAGCAGACTGGCTGGGCAGCTCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638825.1
3UTR CCA 72 bp CATGCGAATGGGCATGGCAGGACGGAGGAGGCATTGTaGGCTGTCCAGAGTGGGCGGTCTGGGCATCCGACT +
Preference number: 3 (lower is better)
Translates to: HANGHGRTEEAL*AVQSGRSGHPT
Trigger: AGTCGGATGCCCAGACCGCCCACTCTGGACAGCCCACAATGCCTCCTCCGTCCTGCCATGCCCATTCGCATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR-3UTR CAA 90 bp CTGCCTCTGTGGAGATGGTGCCGCCTGAGACCCTTCTCTGGCTCTGAATGCTGGAGACCGCAACTCCTCTaGGTGGCGGATAGCCGGGGT +
Preference number: 3 (lower is better)
Translates to: LPLWRWCRLRPFSGSECWRPQLL*VADSRG
Trigger: ACCCCGGCTATCCGCCACCAAGAGGAGTTGCGGTCT...CCAGCATTCAGAGCCAGAGAAGGGTCTCAGGCGGCACCATCTCCACAGAGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR GCA 72 bp CTAAGCTGCCCAGGGTGGTGGCCCCCTCTAGTCTTTTaGTCGGCAGCCGCTTCCATCGGGTCACCGGAAACT +
Preference number: 3 (lower is better)
Translates to: LSCPGWWPPLVF*SAAASIGSPET
Trigger: AGTTTCCGGTGACCCGATGGAAGCGGCTGCCGAGCAAAAGACTAGAGGGGGCCACCACCCTGGGCAGCTTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR CCA 72 bp TGCCTGGGCCACTCGGACTCGTCCGGCAAACCTGCATaGCGTGAATTTACTCTGTCCGAGGGTGAGGAGGGG +
Preference number: 3 (lower is better)
Translates to: CLGHSDSSGKPA*REFTLSEGEEG
Trigger: CCCCTCCTCACCCTCGGACAGAGTAAATTCACGCCATGCAGGTTTGCCGGACGAGTCCGAGTGGCCCAGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265969.8
ENST00000638366.1
ENST00000638825.1
ENST00000640909.2
3UTR CCA 72 bp AAAGCCAGTCGCAAAGGGGAACATCAGGCCCATCCATaGCCGGTGCCAAGGATGGGACCCTCCCGAAGGCTG +
Preference number: 3 (lower is better)
Translates to: KASRKGEHQAHP*PVPRMGPSRRL
Trigger: CAGCCTTCGGGAGGGTCCCATCCTTGGCACCGGCCATGGATGGGCCTGATGTTCCCCTTTGCGACTGGCTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638825.1
3UTR-3UTR CAA 90 bp AGAACCACGTTCCCTCGTCTCCGTGCGGGCTGCCTCTCCTCTTCTAGGTTTGCCCTGGGTACCCCTGCCTaGGGGTCATGGCCTAAAGTC +
Preference number: 3 (lower is better)
Translates to: RTTFPRLRAGCLSSSRFALGTPA*GSWPKV
Trigger: GACTTTAGGCCATGACCCCAAGGCAGGGGTACCCAG...GGCAAACCTAGAAGAGGAGAGGCAGCCCGCACGGAGACGAGGGAACGTGGTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638825.1
3UTR TCA 72 bp GAAGCCTCTCTCTCCAGTGGGGACAGCCTAGCGTGCTaGCTACAAAGAGACCTGGAGCAGGGGCCACCAGCA +
Preference number: 3 (lower is better)
Translates to: EASLSSGDSLAC*LQRDLEQGPPA
Trigger: TGCTGGTGGCCCCTGCTCCAGGTCTCTTTGTAGTCAGCACGCTAGGCTGTCCCCACTGGAGAGAGAGGCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638825.1
3UTR TCA 72 bp ACCAGCCTAGACCAGGTGGGCACAACTAAGCACCAGTaGCCAGAACCACGTTCCCTCGTCTCCGTGCGGGCT +
Preference number: 3 (lower is better)
Translates to: TSLDQVGTTKHQ*PEPRSLVSVRA
Trigger: AGCCCGCACGGAGACGAGGGAACGTGGTTCTGGTCACTGGTGCTTAGTTGTGCCCACCTGGTCTAGGCTGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638825.1
3UTR TCA 72 bp GAGAAAAACAAGTCCTCGGCGGCTGTCGTGGCTCCATaGGAGCGCGGGCCGAATGGATGTAGGTGGGGACAC +
Preference number: 3 (lower is better)
Translates to: EKNKSSAAVVAP*ERGPNGCRWGH
Trigger: GTGTCCCCACCTACATCCATTCGGCCCGCGCTCTCATGGAGCCACGACAGCCGCCGAGGACTTGTTTTTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638825.1
3UTR GCA 72 bp ACCCAGCCTGCTCACCCCGTTCAGCATGCATCCGTGTaGACGTGTGAGGCACTCCAAGACATGCACGAGCTG +
Preference number: 3 (lower is better)
Translates to: TQPAHPVQHASV*TCEALQDMHEL
Trigger: CAGCTCGTGCATGTCTTGGAGTGCCTCACACGTGCACACGGATGCATGCTGAACGGGGTGAGCAGGCTGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638825.1
3UTR CCA 72 bp GAGGGCTACAGGCGTCTCCTGGGAAGGACCTCGAGCTaGGCAGCCCGAAATCAGGGCAGGAATTCTACTCAG +
Preference number: 3 (lower is better)
Translates to: EGYRRLLGRTSS*AARNQGRNSTQ
Trigger: CTGAGTAGAATTCCTGCCCTGATTTCGGGCTGCCCAGCTCGAGGTCCTTCCCAGGAGACGCCTGTAGCCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR CCA 72 bp GGTATGCGGCAGGGTGAAAGGACCGGGAAACCCCCATaGGCAAAGAAATGGGCCTTGAGGGTAGTGCTCGGG +
Preference number: 3 (lower is better)
Translates to: GMRQGERTGKPP*AKKWALRVVLG
Trigger: CCCGAGCACTACCCTCAAGGCCCATTTCTTTGCCCATGGGGGTTTCCCGGTCCTTTCACCCTGCCGCATACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR-3UTR CAA 90 bp CTCTCAGGCACCTACAGAAATCCCAGGAAGGGAAGGGTATGCGGCAGGGTGAAACCCTTGCACCTGCCTTaGCAAGGGACCCTCCTGCCC +
Preference number: 3 (lower is better)
Translates to: LSGTYRNPRKGRVCGRVKPLHLP*QGTLLP
Trigger: GGGCAGGAGGGTCCCTTGCAAAGGCAGGTGCAAGGG...TTTCACCCTGCCGCATACCCTTCCCTTCCTGGGATTTCTGTAGGTGCCTGAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR-3UTR CAA 90 bp CAGACACACAGACTGAGGCTTCAGACGAGACCAAGAGGTGGAGGTGAGGGGCAGCTCGGTGGGAGGCTGTaGCTGGTCTGTAGCGCTTTC +
Preference number: 3 (lower is better)
Translates to: QTHRLRLQTRPRGGGEGQLGGRL*LVCSAF
Trigger: GAAAGCGCTACAGACCAGCAACAGCCTCCCACCGAG...CTGCCCCTCACCTCCACCTCTTGGTCTCGTCTGAAGCCTCAGTCTGTGTGTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR-3UTR CAA 90 bp CTGCCTCTGTGGAGATGGTGCCGCCTGAGACCCTTCTCTGGCTCTGAATGCTGGCCCCTGCCCCATCCTTaGGATGAGATAGTGGCTAGG +
Preference number: 3 (lower is better)
Translates to: LPLWRWCRLRPFSGSECWPLPHP*DEIVAR
Trigger: CCTAGCCACTATCTCATCCAAAGGATGGGGCAGGGG...CCAGCATTCAGAGCCAGAGAAGGGTCTCAGGCGGCACCATCTCCACAGAGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR TCA 72 bp GGGTCCGGGGTCACCCACGGAACTAAGGAAGCAGTCTaGCTGGATCTGGAATCATCGCTACAGGGGGCAGAG +
Preference number: 3 (lower is better)
Translates to: GSGVTHGTKEAV*LDLESSLQGAE
Trigger: CTCTGCCCCCTGTAGCGATGATTCCAGATCCAGTCAGACTGCTTCCTTAGTTCCGTGGGTGACCCCGGACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR GCA 72 bp TCAGGCACCTACAGAAATCCCAGGAAGGGAAGGGTATaGGGCAGGGTGAAAGGACCGGGAAACCCCCATGGG +
Preference number: 3 (lower is better)
Translates to: SGTYRNPRKGRV*GRVKGPGNPHG
Trigger: CCCATGGGGGTTTCCCGGTCCTTTCACCCTGCCGCATACCCTTCCCTTCCTGGGATTTCTGTAGGTGCCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR GCA 72 bp ACTCCAAGACATGCACGAGCTGCCCAGCCAGTCTGCTaGACCAAGAAAGGTGCCCTCTGCCTTCTAGGTCCG +
Preference number: 3 (lower is better)
Translates to: TPRHARAAQPVC*TKKGALCLLGP
Trigger: CGGACCTAGAAGGCAGAGGGCACCTTTCTTGGTGCAGCAGACTGGCTGGGCAGCTCGTGCATGTCTTGGAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638825.1
3UTR GCA 72 bp GGCACTCCAAGACATGCACGAGCTGCCCAGCCAGTCTaGTGCACCAAGAAAGGTGCCCTCTGCCTTCTAGGT +
Preference number: 3 (lower is better)
Translates to: GTPRHARAAQPV*CTKKGALCLLG
Trigger: ACCTAGAAGGCAGAGGGCACCTTTCTTGGTGCAGCAGACTGGCTGGGCAGCTCGTGCATGTCTTGGAGTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638825.1
3UTR GCA 72 bp TGTGCACGTGTGAGGCACTCCAAGACATGCACGAGCTaGCCAGCCAGTCTGCTGCACCAAGAAAGGTGCCCT +
Preference number: 3 (lower is better)
Translates to: CARVRHSKTCTS*PASLLHQERCP
Trigger: AGGGCACCTTTCTTGGTGCAGCAGACTGGCTGGGCAGCTCGTGCATGTCTTGGAGTGCCTCACACGTGCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638825.1
3UTR CCA 72 bp TTGGGCAGGGGACAAGGAACATCCATCAGGGATCCCTaGAGGGATGATAGCCTGGCACCTTTCCCTCCTGGG +
Preference number: 3 (lower is better)
Translates to: LGRGQGTSIRDP*RDDSLAPFPPG
Trigger: CCCAGGAGGGAAAGGTGCCAGGCTATCATCCCTCCAGGGATCCCTGATGGATGTTCCTTGTCCCCTGCCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR-3UTR CAA 90 bp CCTCGGCCAAGCCGCCTGGTCAAGTCACTCTCACAGCCTCTGTCGGCATATACTACGCGTACTCCCCGGTaGATAAGAGGAAGCAGGGTC +
Preference number: 3 (lower is better)
Translates to: PRPSRLVKSLSQPLSAYTTRTPR*IRGSRV
Trigger: GACCCTGCTTCCTCTTATCAACCGGGGAGTACGCGT...AGTATATGCCGACAGAGGCTGTGAGAGTGACTTGACCAGGCGGCTTGGCCGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638366.1
3UTR-3UTR CAA 90 bp CAAGAGCAGCCTGGGGGAGTCAAGGCTCCTCCTGCATTCCTGGGTACCCCTGCCACGGTCAGTTACCATTaGGCCGTAGAAAAAGCTACG +
Preference number: 3 (lower is better)
Translates to: QEQPGGVKAPPAFLGTPATVSYH*AVEKAT
Trigger: CGTAGCTTTTTCTACGGCCAAATGGTAACTGACCGT...GGCAGGGGTACCCAGGAATGCAGGAGGAGCCTTGACTCCCCCAGGCTGCTCTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000638825.1
3UTR-3UTR CAA 90 bp GCTACGTCCGTCCTAGTACAATGCCTGGGCCACTCGGACTCGTCCGGCAAACCTAGGGGGTTGGTGGGTTaGGTTTGCTGGGTTTTCTGT +
Preference number: 3 (lower is better)
Translates to: ATSVLVQCLGHSDSSGKPRGLVG*VCWVFC
Trigger: ACAGAAAACCCAGCAAACCAAACCCACCAACCCCCT...AGGTTTGCCGGACGAGTCCGAGTGGCCCAGGCATTGTACTAGGACGGACGTAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000638825.1
3UTR-3UTR CAA 90 bp CGCAACTCCTCTTGGTGGCGGATAGCCGGGGTCTCACACGCCAGCTTTTGGAGGGGGTCATCTGTTCCTTaGAAATCCCTGTGTCCACAG +
Preference number: 3 (lower is better)
Translates to: RNSSWWRIAGVSHASFWRGSSVP*KSLCPQ
Trigger: CTGTGGACACAGGGATTTCAAAGGAACAGATGACCC...CCTCCAAAAGCTGGCGTGTGAGACCCCGGCTATCCGCCACCAAGAGGAGTTGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR TCA 72 bp ATTCTACTCAGCTATGGAGACAGGCTCTGCCGGGGGTaGGAACCCTTGCACCTGCCTTTGCAAGGGACCCTC +
Preference number: 3 (lower is better)
Translates to: ILLSYGDRLCRG*EPLHLPLQGTL
Trigger: GAGGGTCCCTTGCAAAGGCAGGTGCAAGGGTTCTCACCCCCGGCAGAGCCTGTCTCCATAGCTGAGTAGAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR TCA 72 bp GGGATCCAGGCATCCAAGCTCCAGAGGGCAAGCTTGTaGGGGCCCCAAATACTTCCTCAGCCACAGAGACTG +
Preference number: 3 (lower is better)
Translates to: GIQASKLQRASL*GPQILPQPQRL
Trigger: CAGTCTCTGTGGCTGAGGAAGTATTTGGGGCCCTCACAAGCTTGCCCTCTGGAGCTTGGATGCCTGGATCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR GCA 72 bp GACCCACATCACAGGAGCGGAGATGGACAAGACACATaGGAATGGGCATGGCAGGACGGAGGAGGCATTGTG +
Preference number: 3 (lower is better)
Translates to: DPHHRSGDGQDT*EWAWQDGGGIV
Trigger: CACAATGCCTCCTCCGTCCTGCCATGCCCATTCGCATGTGTCTTGTCCATCTCCGCTCCTGTGATGTGGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR GCA 72 bp ATGCATCCGTGTGCACGTGTGAGGCACTCCAAGACATaGACGAGCTGCCCAGCCAGTCTGCTGCACCAAGAA +
Preference number: 3 (lower is better)
Translates to: MHPCARVRHSKT*TSCPASLLHQE
Trigger: TTCTTGGTGCAGCAGACTGGCTGGGCAGCTCGTGCATGTCTTGGAGTGCCTCACACGTGCACACGGATGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638825.1
3UTR GCA 72 bp TACTGGGCAGGGCACAGACACTGGGAACCGTCTACCTaGTTTTCCCCTCACTCCTCGGGCATTCTGCTTCTG +
Preference number: 3 (lower is better)
Translates to: YWAGHRHWEPST*FSPHSSGILLL
Trigger: CAGAAGCAGAATGCCCGAGGAGTGAGGGGAAAAGCAGGTAGACGGTTCCCAGTGTCTGTGCCCTGCCCAGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638825.1
3UTR CCA 72 bp GCAGCCCGAAATCAGGGCAGGAATTCTACTCAGCTATaGAGACAGGCTCTGCCGGGGGTGAGAACCCTTGCA +
Preference number: 3 (lower is better)
Translates to: AARNQGRNSTQL*RQALPGVRTLA
Trigger: TGCAAGGGTTCTCACCCCCGGCAGAGCCTGTCTCCATAGCTGAGTAGAATTCCTGCCCTGATTTCGGGCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR CCA 72 bp TTGGGATGTCTATATTGCTGCTGCAGTCCCTACCGCTaGAAACGGGGAGAACCCTCGGTGGGAGGCTGTTGC +
Preference number: 3 (lower is better)
Translates to: LGCLYCCCSPYR*KRGEPSVGGCC
Trigger: GCAACAGCCTCCCACCGAGGGTTCTCCCCGTTTCCAGCGGTAGGGACTGCAGCAGCAATATAGACATCCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR CCA 72 bp CAGAGAGCTCGGAGCTGTTTCAGCCTCGGAGACCCCTaGCCATGTTCCTCTCAGGCACCTACAGAAATCCCA +
Preference number: 3 (lower is better)
Translates to: QRARSCFSLGDP*PCSSQAPTEIP
Trigger: TGGGATTTCTGTAGGTGCCTGAGAGGAACATGGCCAGGGGTCTCCGAGGCTGAAACAGCTCCGAGCTCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR CCA 72 bp ACTGTCCAAGCCAGAACTGTCTGGGCCCCTGAAACCTaGGACCAGGGCAAAGTGGCTCTCAAAAGCAGGGCT +
Preference number: 3 (lower is better)
Translates to: TVQARTVWAPET*DQGKVALKSRA
Trigger: AGCCCTGCTTTTGAGAGCCACTTTGCCCTGGTCCCAGGTTTCAGGGGCCCAGACAGTTCTGGCTTGGACAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR CCA 72 bp CTGGGCCCTCAGTCAGCACAGCTGGCTTTTCTGCCCTaGTCTCCAGGCACCGCCAAAGTACTTACTGTTCAC +
Preference number: 3 (lower is better)
Translates to: LGPQSAQLAFLP*SPGTAKVLTVH
Trigger: GTGAACAGTAAGTACTTTGGCGGTGCCTGGAGACCAGGGCAGAAAAGCCAGCTGTGCTGACTGAGGGCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR CCA 72 bp TCAAGGCTCCTCCTGCATTCCTGGGTACCCCTGCCTTaGGGTCATGGCCTAAAGTCAACCTGTCCAATCCCC +
Preference number: 3 (lower is better)
Translates to: SRLLLHSWVPLP*GHGLKSTCPIP
Trigger: GGGGATTGGACAGGTTGACTTTAGGCCATGACCCCAAGGCAGGGGTACCCAGGAATGCAGGAGGAGCCTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638825.1
ENST00000675775.1
3UTR TCA 72 bp ACCAACCGCGTCAACCTCCTTACCCAGGGGCACCAGTaGGGTTCCTCTAGCAGGCTCTTGCCTGCTGAATTT +
Preference number: 3 (lower is better)
Translates to: TNRVNLLTQGHQ*GSSSRLLPAEF
Trigger: AAATTCAGCAGGCAAGAGCCTGCTAGAGGAACCTCACTGGTGCCCCTGGGTAAGGAGGTTGACGCGGTTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR TCA 72 bp TCAGGATATCAGGACAGCACCAACACCACCGGGAAGTaGGTGCTTGGGAAGGGCTTGGGAGCACAGTTGGTG +
Preference number: 3 (lower is better)
Translates to: SGYQDSTNTTGK*VLGKGLGAQLV
Trigger: CACCAACTGTGCTCCCAAGCCCTTCCCAAGCACTCACTTCCCGGTGGTGTTGGTGCTGTCCTGATATCCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR TCA 72 bp AGGAGACCAGATTGTCCCTGGGACAGACACACAGACTaGGGCTTCAGACGAGACCAAGAGGTGGAGGTGAGG +
Preference number: 3 (lower is better)
Translates to: RRPDCPWDRHTD*GFRRDQEVEVR
Trigger: CCTCACCTCCACCTCTTGGTCTCGTCTGAAGCCTCAGTCTGTGTGTCTGTCCCAGGGACAATCTGGTCTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR TCA 72 bp AGATTCTTCTCCAGCTGGCTTGGTTTGCCCATGCACTaGGCCAGCCTAGCACGCCTCTTTCTCTCCCTCCTG +
Preference number: 3 (lower is better)
Translates to: RFFSSWLGLPMH*ASLARLFLSLL
Trigger: CAGGAGGGAGAGAAAGAGGCGTGCTAGGCTGGCTCAGTGCATGGGCAAACCAAGCCAGCTGGAGAAGAATCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638825.1
3UTR GCA 72 bp GGCGTGAATTTACTCTGTCCGAGGGTGAGGAGGGGCTaGAGGTCCACCCAGATGCTTAATAGCCACCAGTGT +
Preference number: 3 (lower is better)
Translates to: GVNLLCPRVRRG*RSTQMLNSHQC
Trigger: ACACTGGTGGCTATTAAGCATCTGGGTGGACCTGCAGCCCCTCCTCACCCTCGGACAGAGTAAATTCACGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265969.8
ENST00000638366.1
ENST00000638825.1
ENST00000640909.2
3UTR GCA 72 bp TTGGCCGTAGAAAAAGCTACGTCCGTCCTAGTACAATaGCTGGGCCACTCGGACTCGTCCGGCAAACCTGCA +
Preference number: 3 (lower is better)
Translates to: LAVEKATSVLVQ*LGHSDSSGKPA
Trigger: TGCAGGTTTGCCGGACGAGTCCGAGTGGCCCAGGCATTGTACTAGGACGGACGTAGCTTTTTCTACGGCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265969.8
ENST00000638366.1
ENST00000638825.1
ENST00000640909.2
3UTR GCA 72 bp GGAGAGGAGAGATCACTTTGCCTTTGGGACTTGACCTaGCATCTGCAAGAGCAGCCTGGGGGAGTCAAGGCT +
Preference number: 3 (lower is better)
Translates to: GEERSLCLWDLT*HLQEQPGGVKA
Trigger: AGCCTTGACTCCCCCAGGCTGCTCTTGCAGATGGCAGGTCAAGTCCCAAAGGCAAAGTGATCTCTCCTCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000638825.1
ENST00000675775.1
3UTR GCA 72 bp TGCTTTCAAAAACCCAGCTCCTCTTCTGACCCAGCCTaGTCACCCCGTTCAGCATGCATCCGTGTGCACGTG +
Preference number: 3 (lower is better)
Translates to: CFQKPSSSSDPA*SPRSACIRVHV
Trigger: CACGTGCACACGGATGCATGCTGAACGGGGTGAGCAGGCTGGGTCAGAAGAGGAGCTGGGTTTTTGAAAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638825.1
3UTR GCA 72 bp GTGACCAGAACCACGTTCCCTCGTCTCCGTGCGGGCTaGCTCTCCTCTTCTAGGTTTGCCTTTGCTTTTGCA +
Preference number: 3 (lower is better)
Translates to: VTRTTFPRLRAG*LSSSRFAFAFA
Trigger: TGCAAAAGCAAAGGCAAACCTAGAAGAGGAGAGGCAGCCCGCACGGAGACGAGGGAACGTGGTTCTGGTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638825.1
3UTR CCA 72 bp TCATTGTCCAAGAGTACAGAGGAATCTGGGCCTGCCTaGAGAGCACTGGGGATTCTTGACTGGCTGGCCCAG +
Preference number: 3 (lower is better)
Translates to: SLSKSTEESGPA*RALGILDWLAQ
Trigger: CTGGGCCAGCCAGTCAAGAATCCCCAGTGCTCTCCAGGCAGGCCCAGATTCCTCTGTACTCTTGGACAATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR CCA 72 bp GACTGCCTTGGGGGTACAGTGAGACTGGAAAGGCCTTaGGGGGCTGCATCTCATCTCTCACAATTCCTGTGG +
Preference number: 3 (lower is better)
Translates to: DCLGGTVRLERP*GAASHLSQFLW
Trigger: CCACAGGAATTGTGAGAGATGAGATGCAGCCCCCCAAGGCCTTTCCAGTCTCACTGTACCCCCAAGGCAGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR CCA 72 bp CAAGATGATGGAGACAGAAAGCCCACGAGAGCTTACTaGGCAGGGCACAGACACTGGGAACCGTCTACCTGC +
Preference number: 3 (lower is better)
Translates to: QDDGDRKPTRAY*AGHRHWEPSTC
Trigger: GCAGGTAGACGGTTCCCAGTGTCTGTGCCCTGCCCAGTAAGCTCTCGTGGGCTTTCTGTCTCCATCATCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638825.1
3UTR CCA 72 bp ATTAGCCTGAGAAAAACAAGTCCTCGGCGGCTGTCGTaGCTCCATGAGAGCGCGGGCCGAATGGATGTAGGT +
Preference number: 3 (lower is better)
Translates to: ISLRKTSPRRLS*LHESAGRMDVG
Trigger: ACCTACATCCATTCGGCCCGCGCTCTCATGGAGCCACGACAGCCGCCGAGGACTTGTTTTTCTCAGGCTAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638825.1
3UTR-3UTR CAA 90 bp GGCGTGAATTTACTCTGTCCGAGGGTGAGGAGGGGCTGCAGGTCCACCCAGATGACGGTCAGTTACCATTaGGCCGTAGAAAAAGCTACG +
Preference number: 3 (lower is better)
Translates to: GVNLLCPRVRRGCRSTQMTVSYH*AVEKAT
Trigger: CGTAGCTTTTTCTACGGCCAAATGGTAACTGACCGT...CATCTGGGTGGACCTGCAGCCCCTCCTCACCCTCGGACAGAGTAAATTCACGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265969.8
ENST00000638366.1
ENST00000638825.1
3UTR-3UTR CAA 90 bp AGACTAAATGCCACCTGTCACGTCAACCTCCTGCTCACCTGGCACTCCTTCTTAACCTGGCGGGCCGCGTaGTCTCTTCAGAACATCACG +
Preference number: 3 (lower is better)
Translates to: RLNATCHVNLLLTWHSFLTWRAA*SLQNIT
Trigger: CGTGATGTTCTGAAGAGACAACGCGGCCCGCCAGGT...TAAGAAGGAGTGCCAGGTGAGCAGGAGGTTGACGTGACAGGTGGCATTTAGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR-3UTR CAA 90 bp AGACTAAATGCCACCTGTCACGTCAACCTCCTGCTCACCTGGCACTCCTTCTTAGCCCCCTCTAGTCTTTaGCTCGGCAGCCGCTTCCAT +
Preference number: 3 (lower is better)
Translates to: RLNATCHVNLLLTWHSFLAPSSL*LGSRFH
Trigger: ATGGAAGCGGCTGCCGAGCAAAAGACTAGAGGGGGC...TAAGAAGGAGTGCCAGGTGAGCAGGAGGTTGACGTGACAGGTGGCATTTAGTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR-3UTR CAA 90 bp TGGGAGAGGGGAGGGAAACAGTATGGAGAGGACGCGGATGACGATGTGGGGGTTTTCACGGGAAAGTGGTaGTACACTGGTTGGGATGTC +
Preference number: 3 (lower is better)
Translates to: WERGGKQYGEDADDDVGVFTGKW*YTGWDV
Trigger: GACATCCCAACCAGTGTACAACCACTTTCCCGTGAA...AACCCCCACATCGTCATCCGCGTCCTCTCCATACTGTTTCCCTCCCCTCTCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR TCA 72 bp ACAGAAATCCCAGGAAGGGAAGGGTATGCGGCAGGGTaGAAGGACCGGGAAACCCCCATGGGCAAAGAAATG +
Preference number: 3 (lower is better)
Translates to: TEIPGREGYAAG*KDRETPMGKEM
Trigger: CATTTCTTTGCCCATGGGGGTTTCCCGGTCCTTTCACCCTGCCGCATACCCTTCCCTTCCTGGGATTTCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR TCA 72 bp AGCACGCCTCTTTCTCTCCCTCCTGGGGGAATGGGATaGGTCCCTACTTCTGCTCTGCACATTGACTCACAC +
Preference number: 3 (lower is better)
Translates to: STPLSLPPGGMG*VPTSALHIDSH
Trigger: GTGTGAGTCAATGTGCAGAGCAGAAGTAGGGACTCATCCCATTCCCCCAGGAGGGAGAGAAAGAGGCGTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638825.1
3UTR GCA 72 bp GTGGTTGTACACTGGTTGGGATGTCTATATTGCTGCTaGAGTCCCTACCGCTGGAAACGGGGAGAACCCTCG +
Preference number: 3 (lower is better)
Translates to: VVVHWLGCLYCC*SPYRWKRGEPS
Trigger: CGAGGGTTCTCCCCGTTTCCAGCGGTAGGGACTGCAGCAGCAATATAGACATCCCAACCAGTGTACAACCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR GCA 72 bp CTCCTGGGGGAATGGGATGAGTCCCTACTTCTGCTCTaGACATTGACTCACACACCTGCATGCCTTCTGGCT +
Preference number: 3 (lower is better)
Translates to: LLGEWDESLLLL*TLTHTPACLLA
Trigger: AGCCAGAAGGCATGCAGGTGTGTGAGTCAATGTGCAGAGCAGAAGTAGGGACTCATCCCATTCCCCCAGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638825.1
3UTR CCA 72 bp GAGGGAAACAGTATGGAGAGGACGCGGATGACGATGTaGGGGTTGAGGCCCATAGCACCCTGCATGGATTTT +
Preference number: 3 (lower is better)
Translates to: EGNSMERTRMTM*GLRPIAPCMDF
Trigger: AAAATCCATGCAGGGTGCTATGGGCCTCAACCCCCACATCGTCATCCGCGTCCTCTCCATACTGTTTCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR CCA 72 bp TGCTTAATAGCCACCAGTGTCCTCGGCCAAGCCGCCTaGTCAAGTCACTCTCACAGCCTCTGTCGGCATATA +
Preference number: 3 (lower is better)
Translates to: CLIATSVLGQAA*SSHSHSLCRHI
Trigger: TATATGCCGACAGAGGCTGTGAGAGTGACTTGACCAGGCGGCTTGGCCGAGGACACTGGTGGCTATTAAGCA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638366.1
ENST00000638825.1
3UTR CCA 72 bp TCCTCAATCAGGGGAGAGGAGAGATCACTTTGCCTTTaGGACTTGACCTGCCATCTGCAAGAGCAGCCTGGG +
Preference number: 3 (lower is better)
Translates to: SSIRGEERSLCL*DLTCHLQEQPG
Trigger: CCCAGGCTGCTCTTGCAGATGGCAGGTCAAGTCCCAAAGGCAAAGTGATCTCTCCTCTCCCCTGATTGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638825.1
ENST00000675775.1
3UTR-3UTR CAA 90 bp TGTAGGTGGGGACACTTCACCCTTAGCGCCTCCCAAAGACTCTGGCACCTAAGCAGTAAAGAGACTGTCTaGTCTGCTCTTTGGGGCCAC +
Preference number: 3 (lower is better)
Translates to: CRWGHFTLSASQRLWHLSSKETV*SALWGH
Trigger: GTGGCCCCAAAGAGCAGACAAGACAGTCTCTTTACT...GCTTAGGTGCCAGAGTCTTTGGGAGGCGCTAAGGGTGAAGTGTCCCCACCTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638825.1
3UTR-3UTR CAA 90 bp CTAGCATCCCCCAAGAGGTCCTACAACCAGGTGAGAATTGGATTCTTGATACCCTCCTCTAGCAGGCTCTaGCCTGCTGAATTTGGCCGC +
Preference number: 3 (lower is better)
Translates to: LASPKRSYNQVRIGFLIPSSSRL*PAEFGR
Trigger: GCGGCCAAATTCAGCAGGCAAGAGCCTGCTAGAGGA...GGGTATCAAGAATCCAATTCTCACCTGGTTGTAGGACCTCTTGGGGGATGCTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR TCA 72 bp CTCGCCCCTCACCCCCAGAAATGTACAGGTTTCTACTaGACGCCGTTACAGTTTGGCTCCAACAACGTGTGT +
Preference number: 3 (lower is better)
Translates to: LAPHPQKCTGFY*TPLQFGSNNVC
Trigger: ACACACGTTGTTGGAGCCAAACTGTAACGGCGTTCAGTAGAAACCTGTACATTTCTGGGGGTGAGGGGCGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000638825.1
3UTR TCA 72 bp GAGGGCCTAGTGGTAGAAATGGTAAGTCTTGGGTATTaGCTGAGTCAGCTTGCACTAGGGAGGCCAGAGCAC +
Preference number: 3 (lower is better)
Translates to: EGLVVEMVSLGY*LSQLALGRPEH
Trigger: GTGCTCTGGCCTCCCTAGTGCAAGCTGACTCAGTCAATACCCAAGACTTACCATTTCTACCACTAGGCCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
3UTR GCA 72 bp AAAGTGGTTGTACACTGGTTGGGATGTCTATATTGCTaGTGCAGTCCCTACCGCTGGAAACGGGGAGAACCC +
Preference number: 3 (lower is better)
Translates to: KVVVHWLGCLYC*CSPYRWKRGEP
Trigger: GGGTTCTCCCCGTTTCCAGCGGTAGGGACTGCAGCAGCAATATAGACATCCCAACCAGTGTACAACCACTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR GCA 72 bp GGGAAAGTGGTTGTACACTGGTTGGGATGTCTATATTaGTGCTGCAGTCCCTACCGCTGGAAACGGGGAGAA +
Preference number: 3 (lower is better)
Translates to: GKVVVHWLGCLY*CCSPYRWKRGE
Trigger: TTCTCCCCGTTTCCAGCGGTAGGGACTGCAGCAGCAATATAGACATCCCAACCAGTGTACAACCACTTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR GCA 72 bp GAAAGCAGATCTCCCACCACTCAGCCCAGGCCCCTTTaGTTCAAATCGTGTCTCAGAGGGAGAACAGTAGTT +
Preference number: 3 (lower is better)
Translates to: ESRSPTTQPRPL*FKSCLRGRTVV
Trigger: AACTACTGTTCTCCCTCTGAGACACGATTTGAAGCAAAGGGGCCTGGGCTGAGTGGTGGGAGATCTGCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
3UTR CCA 72 bp AGCGCTGTTCCTGTCCCACACTCCCTTCTGTGCTTCTaGCACCACAGTAAAGAGACTGTCTTGTCTGCTCTT +
Preference number: 3 (lower is better)
Translates to: SAVPVPHSLLCF*HHSKETVLSAL
Trigger: AAGAGCAGACAAGACAGTCTCTTTACTGTGGTGCCAGAAGCACAGAAGGGAGTGTGGGACAGGAACAGCGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638825.1
3UTR-3UTR CAA 90 bp TGCCAAAAGGCTCCAGCTGCAGCCTGTCTCCATGAAGGCATAGAAGGGGACCATTCCCCTTATCTGCAGTaGCACTTTCTACAGTTTCTG +
Preference number: 3 (lower is better)
Translates to: CQKAPAAACLHEGIEGDHSPYLQ*HFLQFL
Trigger: CAGAAACTGTAGAAAGTGCAACTGCAGATAAGGGGA...ATGGTCCCCTTCTATGCCTTCATGGAGACAGGCTGCAGCTGGAGCCTTTTGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
3UTR-3UTR CAA 90 bp CACACTCCCTTCTGTGCTTCTGGCACCACAGTAAAGAGACTGTCTTGTCTGCTCAGGCTGCACCAACTGTaGCTTTCAAAAACCCAGCTC +
Preference number: 3 (lower is better)
Translates to: HTPFCASGTTVKRLSCLLRLHQL*LSKTQL
Trigger: GAGCTGGGTTTTTGAAAGCAACAGTTGGTGCAGCCT...GAGCAGACAAGACAGTCTCTTTACTGTGGTGCCAGAAGCACAGAAGGGAGTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638825.1
3UTR-3UTR CAA 90 bp GGCCGTAGAAAAAGCTACGTCCGTCCTAGTACAATGCCTGGGCCACTCGGACTCGATTCCAAGAAGCTATaGCAAAGGTTGAGTCCTCAA +
Preference number: 3 (lower is better)
Translates to: GRRKSYVRPSTMPGPLGLDSKKL*QRLSPQ
Trigger: TTGAGGACTCAACCTTTGCAATAGCTTCTTGGAATC...GAGTCCGAGTGGCCCAGGCATTGTACTAGGACGGACGTAGCTTTTTCTACGGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000640909.2
3UTR TCA 72 bp TCAAGTCTTAGAAGGGGCAGTGATATGTTTCAGTTGTaGGCCAGCCAGAGGACCTGCCCAGGCAGACTAAGA +
Preference number: 3 (lower is better)
Translates to: SSLRRGSDMFQL*ASQRTCPGRLR
Trigger: TCTTAGTCTGCCTGGGCAGGTCCTCTGGCTGGCTCACAACTGAAACATATCACTGCCCCTTCTAAGACTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
3UTR TCA 72 bp TCTTGGCAAGTTCTCGATCTGCCACTAGCAATATTCTaGCTGCAAGGACAATGGCCTTACCCCCAAGCCCTG +
Preference number: 3 (lower is better)
Translates to: SWQVLDLPLAIF*LQGQWPYPQAL
Trigger: CAGGGCTTGGGGGTAAGGCCATTGTCCTTGCAGTCAGAATATTGCTAGTGGCAGATCGAGAACTTGCCAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638825.1
3UTR CCA 72 bp CTAAATGCCACCTGTCACGTCAACCTCCTGCTCACCTaGCACTCCTTCTTACTCAGTGCTGTCATTCTTCTC +
Preference number: 3 (lower is better)
Translates to: LNATCHVNLLLT*HSFLLSAVILL
Trigger: GAGAAGAATGACAGCACTGAGTAAGAAGGAGTGCCAGGTGAGCAGGAGGTTGACGTGACAGGTGGCATTTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR-3UTR CAA 90 bp AGACTAAATGCCACCTGTCACGTCAACCTCCTGCTCACCTGGCACTCCTTCTTAGTGGTTGTACACTGGTaGGGATGTCTATATTGCTGC +
Preference number: 3 (lower is better)
Translates to: RLNATCHVNLLLTWHSFLVVVHW*GCLYCC
Trigger: GCAGCAATATAGACATCCCAACCAGTGTACAACCAC...TAAGAAGGAGTGCCAGGTGAGCAGGAGGTTGACGTGACAGGTGGCATTTAGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR-3UTR CAA 90 bp TCTGCAGTTGCACTTTCTACAGTTTCTGTTACCTGCAGTCAGCCACAGTCCGAAGATTTCAGGCATCCCTaGGGGGTCTTGGAACATGTC +
Preference number: 3 (lower is better)
Translates to: SAVALSTVSVTCSQPQSEDFRHP*GVLEHV
Trigger: GACATGTTCCAAGACCCCCAAGGGATGCCTGAAATC...TTCGGACTGTGGCTGACTGCAGGTAACAGAAACTGTAGAAAGTGCAACTGCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000639495.1
3UTR GCA 72 bp GGTCACAAGCATGCCAAACGGGGAAGAAGGCAGCCGTaGGAGTTTCCACAATTCTATTTGGAGCAAAGTTCT +
Preference number: 3 (lower is better)
Translates to: GHKHAKRGRRQP*EFPQFYLEQSS
Trigger: AGAACTTTGCTCCAAATAGAATTGTGGAAACTCGCACGGCTGCCTTCTTCCCCGTTTGGCATGCTTGTGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000638825.1
3UTR-3UTR CAA 90 bp CTGGCTTGTGGATTGATTATCTTTCAAGGATGCCTCTTCCATGCCAAGAACACGCTTTGCCTTTGGGACTaGACCTGCCATCTGCAAGAG +
Preference number: 3 (lower is better)
Translates to: LACGLIIFQGCLFHAKNTLCLWD*TCHLQE
Trigger: CTCTTGCAGATGGCAGGTCAAGTCCCAAAGGCAAAG...CGTGTTCTTGGCATGGAAGAGGCATCCTTGAAAGATAATCAATCCACAAGCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638825.1
ENST00000675775.1
3UTR TCA 72 bp CGACAAATCCCAGGGGCTTCACTTCCCAATTTACTCTaGACCAAAAAGGCCAGTTGCCAAGGTAACTCTGAC +
Preference number: 3 (lower is better)
Translates to: RQIPGASLPNLL*TKKASCQGNSD
Trigger: GTCAGAGTTACCTTGGCAACTGGCCTTTTTGGTTCAGAGTAAATTGGGAAGTGAAGCCCCTGGGATTTGTCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR GCA 72 bp TCTTTCGTACAAGATGGCAAAGCATTTCACGTACAGTaGGTTTCTCGACAAATCCCAGGGGCTTCACTTCCC +
Preference number: 3 (lower is better)
Translates to: SFVQDGKAFHVQ*VSRQIPGASLP
Trigger: GGGAAGTGAAGCCCCTGGGATTTGTCGAGAAACGCACTGTACGTGAAATGCTTTGCCATCTTGTACGAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR CCA 72 bp TATAAGAGAGGGCCTAGTGGTAGAAATGGTAAGTCTTaGGTATTGACTGAGTCAGCTTGCACTAGGGAGGCC +
Preference number: 3 (lower is better)
Translates to: YKRGPSGRNGKS*VLTESACTREA
Trigger: GGCCTCCCTAGTGCAAGCTGACTCAGTCAATACCCAAGACTTACCATTTCTACCACTAGGCCCTCTCTTATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
3UTR CCA 72 bp GTTGAGTCCTCAATAGGAACTCCATACGTGGATACATaGGAAGGCTCTGTCTCCCTGAGGAAAAACCAGATG +
Preference number: 3 (lower is better)
Translates to: VESSIGTPYVDT*EGSVSLRKNQM
Trigger: CATCTGGTTTTTCCTCAGGGAGACAGAGCCTTCCCATGTATCCACGTATGGAGTTCCTATTGAGGACTCAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000640909.2
3UTR-3UTR CAA 90 bp GAAACTATGGCAGAGAGGGTAACTTGCTCAAGGAGGAGAACCTTGTCCTGGGTATCCCCTTATCTGCAGTaGCACTTTCTACAGTTTCTG +
Preference number: 3 (lower is better)
Translates to: ETMAERVTCSRRRTLSWVSPYLQ*HFLQFL
Trigger: CAGAAACTGTAGAAAGTGCAACTGCAGATAAGGGGA...TACCCAGGACAAGGTTCTCCTCCTTGAGCAAGTTACCCTCTCTGCCATAGTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
3UTR-3UTR CAA 90 bp CAGAGGGAGAACAGTAGTTCCCCTTATCTGCAGTTGCACTTTCTACAGTTTCTGGGTAAGTCTTGGGTATaGACTGAGTCAGCTTGCACT +
Preference number: 3 (lower is better)
Translates to: QRENSSSPYLQLHFLQFLGKSWV*TESACT
Trigger: AGTGCAAGCTGACTCAGTCAATACCCAAGACTTACC...CAGAAACTGTAGAAAGTGCAACTGCAGATAAGGGGAACTACTGTTCTCCCTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
3UTR-3UTR CAA 90 bp ATTTTGAGTAGCGTGATGAAATCTCATGCCATGTCACTCCATCCCACCCAGAACGGTAAGTCTTGGGTATaGACTGAGTCAGCTTGCACT +
Preference number: 3 (lower is better)
Translates to: ILSSVMKSHAMSLHPTQNGKSWV*TESACT
Trigger: AGTGCAAGCTGACTCAGTCAATACCCAAGACTTACC...GTTCTGGGTGGGATGGAGTGACATGGCATGAGATTTCATCACGCTACTCAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
3UTR TCA 72 bp GAAAGTTGGTCACACTGGATCTACACACCGATAAGATaGGAGAATCAACCTAGACTAGCTGCTGTCAGGGGT +
Preference number: 3 (lower is better)
Translates to: ESWSHWIYTPIR*ENQPRLAAVRG
Trigger: ACCCCTGACAGCAGCTAGTCTAGGTTGATTCTCTCATCTTATCGGTGTGTAGATCCAGTGTGACCAACTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000638825.1
3UTR GCA 72 bp TCGTGTCTCAGAGGGAGAACAGTAGTTCCCCTTATCTaGAGTTGCACTTTCTACAGTTTCTGTTACCTGCAG +
Preference number: 3 (lower is better)
Translates to: SCLRGRTVVPLI*SCTFYSFCYLQ
Trigger: CTGCAGGTAACAGAAACTGTAGAAAGTGCAACTGCAGATAAGGGGAACTACTGTTCTCCCTCTGAGACACGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
3UTR-3UTR CAA 90 bp AGATGGCAAAGCATTTCACGTACAGTGCGTTTCTCGACAAATCCCAGGGGCTTCAGGATAATACTGTCATaGTCCAAGAGTACAGAGGAA +
Preference number: 3 (lower is better)
Translates to: RWQSISRTVRFSTNPRGFRIILS*SKSTEE
Trigger: TTCCTCTGTACTCTTGGACAATGACAGTATTATCCT...GAAGCCCCTGGGATTTGTCGAGAAACGCACTGTACGTGAAATGCTTTGCCATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR-3UTR CAA 90 bp ATTCAAGTCTTAGAAGGGGCAGTGATATGTTTCAGTTGTGAGCCAGCCAGAGGATCCCCTTATCTGCAGTaGCACTTTCTACAGTTTCTG +
Preference number: 3 (lower is better)
Translates to: IQVLEGAVICFSCEPARGSPYLQ*HFLQFL
Trigger: CAGAAACTGTAGAAAGTGCAACTGCAGATAAGGGGA...TCCTCTGGCTGGCTCACAACTGAAACATATCACTGCCCCTTCTAAGACTTGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
3UTR-3UTR CAA 90 bp GATGACCATGGTATACTTGGGAATGTTGGGTTTATAGAATTAAAGTGGGTTGGTGCAAAGGGGTCTCTTTaGGCTGCCAAAAGGCTCCAG +
Preference number: 3 (lower is better)
Translates to: DDHGILGNVGFIELKWVGAKGSL*AAKRLQ
Trigger: CTGGAGCCTTTTGGCAGCCAAAAGAGACCCCTTTGC...ACCAACCCACTTTAATTCTATAAACCCAACATTCCCAAGTATACCATGGTCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
3UTR TCA 72 bp GAAACTCAGCTCTGCTCCTTCCTAGCAATGCAACGTTaGGTGAATTATAACCTCCTTGAACCTCAGTTTCCC +
Preference number: 3 (lower is better)
Translates to: ETQLCSFLAMQR*VNYNLLEPQFP
Trigger: GGGAAACTGAGGTTCAAGGAGGTTATAATTCACTCAACGTTGCATTGCTAGGAAGGAGCAGAGCTGAGTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639495.1
3UTR CCA 72 bp TGGCACCACAGTAAAGAGACTGTCTTGTCTGCTCTTTaGGGCCACACCAATCAGTCTAACATTCAAGATGAT +
Preference number: 3 (lower is better)
Translates to: WHHSKETVLSAL*GHTNQSNIQDD
Trigger: ATCATCTTGAATGTTAGACTGATTGGTGTGGCCCCAAAGAGCAGACAAGACAGTCTCTTTACTGTGGTGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638825.1
3UTR-3UTR CAA 90 bp AGTAGCGTGATGAAATCTCATGCCATGTCACTCCATCCCACCCAGAACATGAATGTGGTTTTCAGTATCTaGCATTACAGGACCACATCT +
Preference number: 3 (lower is better)
Translates to: SSVMKSHAMSLHPTQNMNVVFSI*HYRTTS
Trigger: AGATGTGGTCCTGTAATGCAAGATACTGAAAACCAC...ATTCATGTTCTGGGTGGGATGGAGTGACATGGCATGAGATTTCATCACGCTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639495.1
3UTR TCA 72 bp ATGAACTATGAAGGTGAGGTCAATATGACCGATGACTaGCCGACTGCCCTTTTTGGAAGCTTTCCTCTTGAT +
Preference number: 3 (lower is better)
Translates to: MNYEGEVNMTDD*PTALFGSFPLD
Trigger: ATCAAGAGGAAAGCTTCCAAAAAGGGCAGTCGGTCAGTCATCGGTCATATTGACCTCACCTTCATAGTTCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000638825.1
3UTR TCA 72 bp AAACTCCCACTCGACCATCAACCCAAACAGACAACGTaGAAGCTAGAGTCACTTCAACAGGTTCCTAAAGAT +
Preference number: 3 (lower is better)
Translates to: KLPLDHQPKQTT*KLESLQQVPKD
Trigger: ATCTTTAGGAACCTGTTGAAGTGACTCTAGCTTTCACGTTGTCTGTTTGGGTTGATGGTCGAGTGGGAGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR TCA 72 bp AATCTCATGCCATGTCACTCCATCCCACCCAGAACATaGATCATCTCTTTGTCCAGTGTGTCCATGATGTAT +
Preference number: 3 (lower is better)
Translates to: NLMPCHSIPPRT*IISLSSVSMMY
Trigger: ATACATCATGGACACACTGGACAAAGAGATGATTCATGTTCTGGGTGGGATGGAGTGACATGGCATGAGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639495.1
3UTR CCA 72 bp ACTTGGGAATGTTGGGTTTATAGAATTAAAGTGGGTTaGTGCTGGAAAGGATCTCAGAAGCCAACTGTTCCC +
Preference number: 3 (lower is better)
Translates to: TWECWVYRIKVG*CWKGSQKPTVP
Trigger: GGGAACAGTTGGCTTCTGAGATCCTTTCCAGCACCAACCCACTTTAATTCTATAAACCCAACATTCCCAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
3UTR-3UTR CAA 90 bp AATATTCAAGTCTTAGAAGGGGCAGTGATATGTTTCAGTTGTGAGCCAGCCAGATATAGCTCCACATCCTaGCCAGAACTTAGCATGATC +
Preference number: 3 (lower is better)
Translates to: NIQVLEGAVICFSCEPARYSSTS*PELSMI
Trigger: GATCATGCTAAGTTCTGGCAAGGATGTGGAGCTATA...TCTGGCTGGCTCACAACTGAAACATATCACTGCCCCTTCTAAGACTTGAATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639495.1
3UTR CCA 72 bp GGTATACTTGGGAATGTTGGGTTTATAGAATTAAAGTaGGTTGGTGCTGGAAAGGATCTCAGAAGCCAACTG +
Preference number: 3 (lower is better)
Translates to: GILGNVGFIELK*VGAGKDLRSQL
Trigger: CAGTTGGCTTCTGAGATCCTTTCCAGCACCAACCCACTTTAATTCTATAAACCCAACATTCCCAAGTATACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
3UTR-3UTR CAA 90 bp ATATATATAGTTTGGTACTATCTGAGATTTCAGGCATCCCTTGGGGGTCTTGGAGAAGTTGACGTGATTTaGAGAGGGACACTAAGTCCA +
Preference number: 3 (lower is better)
Translates to: IYIVWYYLRFQASLGGLGEVDVI*RGTLSP
Trigger: TGGACTTAGTGTCCCTCTCAAAATCACGTCAACTTC...TCCAAGACCCCCAAGGGATGCCTGAAATCTCAGATAGTACCAAACTATATATAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000639495.1
3UTR GCA 72 bp TTGTGGATTGATTATCTTTCAAGGATGCCTCTTCCATaGCAAGAACACGGATCTTGTGTAGCTAAGTTCACA +
Preference number: 3 (lower is better)
Translates to: LWIDYLSRMPLP*QEHGSCVAKFT
Trigger: TGTGAACTTAGCTACACAAGATCCGTGTTCTTGGCATGGAAGAGGCATCCTTGAAAGATAATCAATCCACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638825.1
ENST00000675775.1
3UTR CCA 72 bp GAATGTTGGGTTTATAGAATTAAAGTGGGTTGGTGCTaGAAAGGATCTCAGAAGCCAACTGTTCCCAATCTT +
Preference number: 3 (lower is better)
Translates to: ECWVYRIKVGWC*KGSQKPTVPNL
Trigger: AAGATTGGGAACAGTTGGCTTCTGAGATCCTTTCCAGCACCAACCCACTTTAATTCTATAAACCCAACATTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
3UTR-3UTR CAA 90 bp CAAAGGATGATGAATTCAGGATCTAAAGGGTGGAATATGAAAAGAAGTCAACAAGGTAAGTCTTGGGTATaGACTGAGTCAGCTTGCACT +
Preference number: 3 (lower is better)
Translates to: QRMMNSGSKGWNMKRSQQGKSWV*TESACT
Trigger: AGTGCAAGCTGACTCAGTCAATACCCAAGACTTACC...TTGTTGACTTCTTTTCATATTCCACCCTTTAGATCCTGAATTCATCATCCTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
3UTR TCA 72 bp ACAATTCTATTTGGAGCAAAGTTCTCAGTTTCCACGTaGGAGATGAACTATGAAGGTGAGGTCAATATGACC +
Preference number: 3 (lower is better)
Translates to: TILFGAKFSVST*EMNYEGEVNMT
Trigger: GGTCATATTGACCTCACCTTCATAGTTCATCTCTCACGTGGAAACTGAGAACTTTGCTCCAAATAGAATTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000638825.1
3UTR TCA 72 bp CTCAGAAGCCAACTGTTCCCAATCTTCATCTGTAAGTaGAATATTCAAGTCTTAGAAGGGGCAGTGATATGT +
Preference number: 3 (lower is better)
Translates to: LRSQLFPIFICK*NIQVLEGAVIC
Trigger: ACATATCACTGCCCCTTCTAAGACTTGAATATTTCACTTACAGATGAAGATTGGGAACAGTTGGCTTCTGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
3UTR CCA 72 bp ATGAGCTTGTTAGTTATATTGCCTTTAAATTGTCAGTaGGATAGGCAGTGGGGTAGTCTGAAGACATTCCTA +
Preference number: 3 (lower is better)
Translates to: MSLLVILPLNCQ*DRQWGSLKTFL
Trigger: TAGGAATGTCTTCAGACTACCCCACTGCCTATCCCACTGACAATTTAAAGGCAATATAACTAACAAGCTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
3UTR CAA 72 bp CTGGCAGCCCTCCGCCATGCAGCACCATGCGGGGAGTaGCGCACCGTGCCCCGGCTCAAAGGACCTCTGGGC +
Preference number: 4 (lower is better)
Translates to: LAALRHAAPCGE*RTVPRLKGPLG
Trigger: GCCCAGAGGTCCTTTGAGCCGGGGCACGGTGCGCAACTCCCCGCATGGTGCTGCATGGCGGAGGGCTGCCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638825.1
CDS-3UTR GCA 90 bp ACCCATCTGCAGGAGCGCGAGGCGGCCCGGACGATGCACGGTGCTCCAGCTTCCCGCGGGGGAGATGGATaGCGCCTGCCTTCCTCCCTG +
Preference number: 4 (lower is better)
Translates to: THLQEREAARTMHGAPASRGGDG*RLPSSL
Trigger: CAGGGAGGAAGGCAGGCGGCATCCATCTCCCCCGCG...GGAAGCTGGAGCACCGTGCATCGTCCGGGCCGCCTCGCGCTCCTGCAGATGGGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675775.1
CDS-3UTR TCA 90 bp GCCCAGGCGGGGGCTTCTCTGAGACCTCACTGCTGTTCTAGGTGCCATGGGCAGGAGCGCTGCTCTCCGTaGGCCCGGGCTCGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: AQAGASLRPHCCSRCHGQERCSP*ARARAG
Trigger: CCCAGCTCGAGCCCGGGCTCACGGAGAGCAGCGCTC...CTGCCCATGGCACCTAGAACAGCAGTGAGGTCTCAGAGAAGCCCCCGCCTGGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR GCA 90 bp ACCCATCTGCAGGAGCGCGAGGCGGCCCGGACGATGCACGGTGCTCCAGCTTCCCGGTCCAGGGGAATGTaGGCGGGATCCCAGGGGTCT +
Preference number: 4 (lower is better)
Translates to: THLQEREAARTMHGAPASRSRGM*AGSQGS
Trigger: AGACCCCTGGGATCCCGCGCACATTCCCCTGGACCG...GGAAGCTGGAGCACCGTGCATCGTCCGGGCCGCCTCGCGCTCCTGCAGATGGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675775.1
CDS-3UTR GCA 90 bp TCGCGGGTGCCCGAGCGCGTAAAGGGCAGGCCCTCATCGGGAGTGAGGGCCTGGAGGGTGAGGAGGGGCTaGAGGTCCACCCAGATGCTT +
Preference number: 4 (lower is better)
Translates to: SRVPERVKGRPSSGVRAWRVRRG*RSTQML
Trigger: AAGCATCTGGGTGGACCTGCAGCCCCTCCTCACCCT...CCAGGCCCTCACTCCCGATGAGGGCCTGCCCTTTACGCGCTCGGGCACCCGCGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638366.1
CDS-3UTR GCA 90 bp AGTCCTCGGCGGCTGTCGTGGCTCCATGAGAGCGCGGGCCGAATGGATGTAGGTCCTTGCCCGCCGCCCTaGCCACCCATCTGCAGGAGC +
Preference number: 4 (lower is better)
Translates to: SPRRLSWLHESAGRMDVGPCPPP*PPICRS
Trigger: GCTCCTGCAGATGGGTGGGCAGGGCGGCGGGCAAGG...ACCTACATCCATTCGGCCCGCGCTCTCATGGAGCCACGACAGCCGCCGAGGACT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638825.1
CDS-3UTR CCA 90 bp GGACTTGACCTGCCATCTGCAAGAGCAGCCTGGGGGAGTCAAGGCTCCTCCTGCGGCTGCGCTCGGACTTaGGCTCCCGCGGCGGTGCTG +
Preference number: 4 (lower is better)
Translates to: GLDLPSARAAWGSQGSSCGCART*APAAVL
Trigger: CAGCACCGCCGCGGGAGCCCAAGTCCGAGCGCAGCC...GCAGGAGGAGCCTTGACTCCCCCAGGCTGCTCTTGCAGATGGCAGGTCAAGTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675775.1
CDS-3UTR CCA 90 bp GGACTTGACCTGCCATCTGCAAGAGCAGCCTGGGGGAGTCAAGGCTCCTCCTGCAGCCCGGGCTCGAGCTaGGGTTCCGCTGGGCTGCGC +
Preference number: 4 (lower is better)
Translates to: GLDLPSARAAWGSQGSSCSPGSS*GSAGLR
Trigger: GCGCAGCCCAGCGGAACCCCAGCTCGAGCCCGGGCT...GCAGGAGGAGCCTTGACTCCCCCAGGCTGCTCTTGCAGATGGCAGGTCAAGTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675775.1
CDS-3UTR CCA 90 bp GCCCAGGCGGGGGCTTCTCTGAGACCTCACTGCTGTTCTAGGTGCCATGGGCAGCTTCTCCCCGCCTCCTaGAGGAGATGGCGGGCCCCC +
Preference number: 4 (lower is better)
Translates to: AQAGASLRPHCCSRCHGQLLPAS*RRWRAP
Trigger: GGGGGCCCGCCATCTCCTCCAGGAGGCGGGGAGAAG...CTGCCCATGGCACCTAGAACAGCAGTGAGGTCTCAGAGAAGCCCCCGCCTGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CCA 90 bp CAAGAGCAGCCTGGGGGAGTCAAGGCTCCTCCTGCATTCCTGGGTACCCCTGCCTCGCTCTCGTCCCCTTaGCCCATCGCGGCGCCCCCT +
Preference number: 4 (lower is better)
Translates to: QEQPGGVKAPPAFLGTPASLSSP*PIAAPP
Trigger: AGGGGGCGCCGCGATGGGCCAAGGGGACGAGAGCGA...GGCAGGGGTACCCAGGAATGCAGGAGGAGCCTTGACTCCCCCAGGCTGCTCTTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000675775.1
CDS-3UTR CCA 90 bp CAGGCACCGCCAAAGTACTTACTGTTCACACCAGCTGCGGGCACCGGAGGGGCGCGCCCAGCATCTCCCTaGGCCCCCAGGCTCCACACC +
Preference number: 4 (lower is better)
Translates to: QAPPKYLLFTPAAGTGGARPASP*APRLHT
Trigger: GGTGTGGAGCCTGGGGGCCCAGGGAGATGCTGGGCG...CGCCCCTCCGGTGCCCGCAGCTGGTGTGAACAGTAAGTACTTTGGCGGTGCCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR TCA 90 bp CGGACTCGTCCGGCAAACCTGCATGGCGTGAATTTACTCTGTCCGAGGGTGAGGCTCCCGCGGCGGTGCTaGAGGGACAGCTCCCGGCGG +
Preference number: 4 (lower is better)
Translates to: RTRPANLHGVNLLCPRVRLPRRC*RDSSRR
Trigger: CCGCCGGGAGCTGTCCCTTCAGCACCGCCGCGGGAG...CCTCACCCTCGGACAGAGTAAATTCACGCCATGCAGGTTTGCCGGACGAGTCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000640909.2
CDS-3UTR TCA 90 bp GCAAACCTGCATGGCGTGAATTTACTCTGTCCGAGGGTGAGGAGGGGCTGCAGGCTCCCGCGGCGGTGCTaGAGGGACAGCTCCCGGCGG +
Preference number: 4 (lower is better)
Translates to: ANLHGVNLLCPRVRRGCRLPRRC*RDSSRR
Trigger: CCGCCGGGAGCTGTCCCTTCAGCACCGCCGCGGGAG...CCTGCAGCCCCTCCTCACCCTCGGACAGAGTAAATTCACGCCATGCAGGTTTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000640909.2
CDS-3UTR TCA 90 bp CCACAGCTGCCAGGGCCTCAAGTTCTCTCTGCCAGCCTGACATCTCACTTGGGGGAGCGCTGCTCTCCGTaGGCCCGGGCTCGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: PQLPGPQVLSASLTSHLGERCSP*ARARAG
Trigger: CCCAGCTCGAGCCCGGGCTCACGGAGAGCAGCGCTC...CCCCAAGTGAGATGTCAGGCTGGCAGAGAGAACTTGAGGCCCTGGCAGCTGTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675775.1
CDS-3UTR GCA 90 bp TCTGCAAGAGCAGCCTGGGGGAGTCAAGGCTCCTCCTGCATTCCTGGGTACCCCGGGGTTCCGCTGGGCTaGGCTCGGACTTGGGCTCCC +
Preference number: 4 (lower is better)
Translates to: SARAAWGSQGSSCIPGYPGVPLG*ARTWAP
Trigger: GGGAGCCCAAGTCCGAGCGCAGCCCAGCGGAACCCC...GGGGTACCCAGGAATGCAGGAGGAGCCTTGACTCCCCCAGGCTGCTCTTGCAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000675775.1
CDS-3UTR CCA 90 bp GTCCTAGTACAATGCCTGGGCCACTCGGACTCGTCCGGCAAACCTGCATGGCGTGGCTGCGCTCGGACTTaGGCTCCCGCGGCGGTGCTG +
Preference number: 4 (lower is better)
Translates to: VLVQCLGHSDSSGKPAWRGCART*APAAVL
Trigger: CAGCACCGCCGCGGGAGCCCAAGTCCGAGCGCAGCC...ACGCCATGCAGGTTTGCCGGACGAGTCCGAGTGGCCCAGGCATTGTACTAGGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000640909.2
CDS-3UTR CCA 90 bp TGCAGGTCCACCCAGATGCTTAATAGCCACCAGTGTCCTCGGCCAAGCCGCCTGAGCCCGGGCTCGAGCTaGGGTTCCGCTGGGCTGCGC +
Preference number: 4 (lower is better)
Translates to: CRSTQMLNSHQCPRPSRLSPGSS*GSAGLR
Trigger: GCGCAGCCCAGCGGAACCCCAGCTCGAGCCCGGGCT...CAGGCGGCTTGGCCGAGGACACTGGTGGCTATTAAGCATCTGGGTGGACCTGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000640909.2
CDS-3UTR CCA 90 bp GGACTTGACCTGCCATCTGCAAGAGCAGCCTGGGGGAGTCAAGGCTCCTCCTGCCTTCTCCCCGCCTCCTaGAGGAGATGGCGGGCCCCC +
Preference number: 4 (lower is better)
Translates to: GLDLPSARAAWGSQGSSCLLPAS*RRWRAP
Trigger: GGGGGCCCGCCATCTCCTCCAGGAGGCGGGGAGAAG...GCAGGAGGAGCCTTGACTCCCCCAGGCTGCTCTTGCAGATGGCAGGTCAAGTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675775.1
CDS-3UTR CCA 90 bp GGACTTGACCTGCCATCTGCAAGAGCAGCCTGGGGGAGTCAAGGCTCCTCCTGCCGCTCCTCTGTGAGGTaGTCGCCGCGGCGCGCTCTC +
Preference number: 4 (lower is better)
Translates to: GLDLPSARAAWGSQGSSCRSSVR*SPRRAL
Trigger: GAGAGCGCGCCGCGGCGACCACCTCACAGAGGAGCG...GCAGGAGGAGCCTTGACTCCCCCAGGCTGCTCTTGCAGATGGCAGGTCAAGTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675775.1
CDS-3UTR CCA 90 bp GCTACGTCCGTCCTAGTACAATGCCTGGGCCACTCGGACTCGTCCGGCAAACCTGCCCAGCGACACCCATaGGAGCGGCCGCCAGGGGGA +
Preference number: 4 (lower is better)
Translates to: ATSVLVQCLGHSDSSGKPAQRHP*ERPPGG
Trigger: TCCCCCTGGCGGCCGCTCCCATGGGTGTCGCTGGGC...AGGTTTGCCGGACGAGTCCGAGTGGCCCAGGCATTGTACTAGGACGGACGTAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000640909.2
CDS-3UTR CCA 90 bp GCCCAGGCGGGGGCTTCTCTGAGACCTCACTGCTGTTCTAGGTGCCATGGGCAGCTGCTTTCCAGAGGCTaGGGGCCCTGCCTCCCCCAG +
Preference number: 4 (lower is better)
Translates to: AQAGASLRPHCCSRCHGQLLSRG*GPCLPQ
Trigger: CTGGGGGAGGCAGGGCCCCCAGCCTCTGGAAAGCAG...CTGCCCATGGCACCTAGAACAGCAGTGAGGTCTCAGAGAAGCCCCCGCCTGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR TCA 90 bp AGCCCGAAATCAGGGCAGGAATTCTACTCAGCTATGGAGACAGGCTCTGCCGGGCTCCCGCGGCGGTGCTaGAGGGACAGCTCCCGGCGG +
Preference number: 4 (lower is better)
Translates to: SPKSGQEFYSAMETGSAGLPRRC*RDSSRR
Trigger: CCGCCGGGAGCTGTCCCTTCAGCACCGCCGCGGGAG...CCCGGCAGAGCCTGTCTCCATAGCTGAGTAGAATTCCTGCCCTGATTTCGGGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR TCA 90 bp CTCCTGCATTCCTGGGTACCCCTGCCTTGGGGTCATGGCCTAAAGTCAACCTGTCTCCCGCGGCGGTGCTaGAGGGACAGCTCCCGGCGG +
Preference number: 4 (lower is better)
Translates to: LLHSWVPLPWGHGLKSTCLPRRC*RDSSRR
Trigger: CCGCCGGGAGCTGTCCCTTCAGCACCGCCGCGGGAG...ACAGGTTGACTTTAGGCCATGACCCCAAGGCAGGGGTACCCAGGAATGCAGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675775.1
CDS-3UTR GCA 90 bp CCCAGGGGCACCAGTGAGGTTCCTCTAGCAGGCTCTTGCCTGCTGAATTTGGCCGGGGTTCCGCTGGGCTaGGCTCGGACTTGGGCTCCC +
Preference number: 4 (lower is better)
Translates to: PRGTSEVPLAGSCLLNLAGVPLG*ARTWAP
Trigger: GGGAGCCCAAGTCCGAGCGCAGCCCAGCGGAACCCC...GGCCAAATTCAGCAGGCAAGAGCCTGCTAGAGGAACCTCACTGGTGCCCCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR GCA 90 bp CCGGCAAACCTGCATGGCGTGAATTTACTCTGTCCGAGGGTGAGGAGGGGCTGCGGGGTTCCGCTGGGCTaGGCTCGGACTTGGGCTCCC +
Preference number: 4 (lower is better)
Translates to: PANLHGVNLLCPRVRRGCGVPLG*ARTWAP
Trigger: GGGAGCCCAAGTCCGAGCGCAGCCCAGCGGAACCCC...GCAGCCCCTCCTCACCCTCGGACAGAGTAAATTCACGCCATGCAGGTTTGCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000640909.2
CDS-3UTR GCA 90 bp CAGGCACCGCCAAAGTACTTACTGTTCACACCAGCTGCGGGCACCGGAGGGGCGGAGATGGATGCCGCCTaGCTTCCTCCCTGCGTGGCC +
Preference number: 4 (lower is better)
Translates to: QAPPKYLLFTPAAGTGGAEMDAA*LPPCVA
Trigger: GGCCACGCAGGGAGGAAGGCAGGCGGCATCCATCTC...CGCCCCTCCGGTGCCCGCAGCTGGTGTGAACAGTAAGTACTTTGGCGGTGCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR GCA 90 bp GCAAGAGCAGCCTGGGGGAGTCAAGGCTCCTCCTGCATTCCTGGGTACCCCTGCGAGATGGATGCCGCCTaGCTTCCTCCCTGCGTGGCC +
Preference number: 4 (lower is better)
Translates to: ARAAWGSQGSSCIPGYPCEMDAA*LPPCVA
Trigger: GGCCACGCAGGGAGGAAGGCAGGCGGCATCCATCTC...GCAGGGGTACCCAGGAATGCAGGAGGAGCCTTGACTCCCCCAGGCTGCTCTTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675775.1
CDS-3UTR GCA 90 bp TCTGCAAGAGCAGCCTGGGGGAGTCAAGGCTCCTCCTGCATTCCTGGGTACCCCGGGGGAACAGAGGCCTaGGGCTCTGGCCACCCCAAC +
Preference number: 4 (lower is better)
Translates to: SARAAWGSQGSSCIPGYPGGTEA*GSGHPN
Trigger: GTTGGGGTGGCCAGAGCCGCAGGCCTCTGTTCCCCC...GGGGTACCCAGGAATGCAGGAGGAGCCTTGACTCCCCCAGGCTGCTCTTGCAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000675775.1
CDS-3UTR GCA 90 bp CCACAGCTGCCAGGGCCTCAAGTTCTCTCTGCCAGCCTGACATCTCACTTGGGGGCCCAGATGCGCGGCTaGCAGCGGCGCCAAAAGCCG +
Preference number: 4 (lower is better)
Translates to: PQLPGPQVLSASLTSHLGAQMRG*QRRQKP
Trigger: CGGCTTTTGGCGCCGCTGGCAGCCGCGCATCTGGGC...CCCCAAGTGAGATGTCAGGCTGGCAGAGAGAACTTGAGGCCCTGGCAGCTGTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675775.1
CDS-3UTR GCA 90 bp CAGGCACCGCCAAAGTACTTACTGTTCACACCAGCTGCGGGCACCGGAGGGGCGCAGACACGCTGGTCCTaGCTCCCACTCTGGCTGGCC +
Preference number: 4 (lower is better)
Translates to: QAPPKYLLFTPAAGTGGAQTRWS*LPLWLA
Trigger: GGCCAGCCAGAGTGGGAGGCAGGACCAGCGTGTCTG...CGCCCCTCCGGTGCCCGCAGCTGGTGTGAACAGTAAGTACTTTGGCGGTGCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR GCA 90 bp CAAGAGCAGCCTGGGGGAGTCAAGGCTCCTCCTGCATTCCTGGGTACCCCTGCCAGGCGGCCCGGACGATaGACGGTGCTCCAGCTTCCT +
Preference number: 4 (lower is better)
Translates to: QEQPGGVKAPPAFLGTPARRPGR*TVLQLP
Trigger: AGGAAGCTGGAGCACCGTGCATCGTCCGGGCCGCCT...GGCAGGGGTACCCAGGAATGCAGGAGGAGCCTTGACTCCCCCAGGCTGCTCTTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000638825.1
ENST00000675775.1
CDS-3UTR GCA 90 bp CCATCTGCAAGAGCAGCCTGGGGGAGTCAAGGCTCCTCCTGCATTCCTGGGTACCTCGGTGTGCCTGCCTaGCCCTCAGCGCCCTTGCCC +
Preference number: 4 (lower is better)
Translates to: PSARAAWGSQGSSCIPGYLGVPA*PSAPLP
Trigger: GGGCAAGGGCGCTGAGGGGCAGGCAGGCACACCGAG...GTACCCAGGAATGCAGGAGGAGCCTTGACTCCCCCAGGCTGCTCTTGCAGATGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000638825.1
ENST00000675775.1
CDS-3UTR CCA 90 bp GAAAAAGCTACGTCCGTCCTAGTACAATGCCTGGGCCACTCGGACTCGTCCGGCAGCCCGGGCTCGAGCTaGGGTTCCGCTGGGCTGCGC +
Preference number: 4 (lower is better)
Translates to: EKATSVLVQCLGHSDSSGSPGSS*GSAGLR
Trigger: GCGCAGCCCAGCGGAACCCCAGCTCGAGCCCGGGCT...GCCGGACGAGTCCGAGTGGCCCAGGCATTGTACTAGGACGGACGTAGCTTTTTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000640909.2
CDS-3UTR CCA 90 bp TGCAGGTCCACCCAGATGCTTAATAGCCACCAGTGTCCTCGGCCAAGCCGCCTGCTTCTCCCCGCCTCCTaGAGGAGATGGCGGGCCCCC +
Preference number: 4 (lower is better)
Translates to: CRSTQMLNSHQCPRPSRLLLPAS*RRWRAP
Trigger: GGGGGCCCGCCATCTCCTCCAGGAGGCGGGGAGAAG...CAGGCGGCTTGGCCGAGGACACTGGTGGCTATTAAGCATCTGGGTGGACCTGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000640909.2
CDS-3UTR CCA 90 bp GCTACGTCCGTCCTAGTACAATGCCTGGGCCACTCGGACTCGTCCGGCAAACCTCTTCTCCCCGCCTCCTaGAGGAGATGGCGGGCCCCC +
Preference number: 4 (lower is better)
Translates to: ATSVLVQCLGHSDSSGKPLLPAS*RRWRAP
Trigger: GGGGGCCCGCCATCTCCTCCAGGAGGCGGGGAGAAG...AGGTTTGCCGGACGAGTCCGAGTGGCCCAGGCATTGTACTAGGACGGACGTAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000640909.2
CDS-3UTR CCA 90 bp GGGTCTTGGGGAGACATCCGCTGGGTCACAAGCATGCCAAACGGGGAAGAAGGCGCCTTCCTCCCTGCGTaGCCGGGCTGCAGCTCGGGA +
Preference number: 4 (lower is better)
Translates to: GSWGDIRWVTSMPNGEEGAFLPA*PGCSSG
Trigger: TCCCGAGCTGCAGCCCGGCCACGCAGGGAGGAAGGC...GCCTTCTTCCCCGTTTGGCATGCTTGTGACCCAGCGGATGTCTCCCCAAGACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265969.8
CDS-3UTR CCA 90 bp CCATCTGCAAGAGCAGCCTGGGGGAGTCAAGGCTCCTCCTGCATTCCTGGGTACGCCTTCCTCCCTGCGTaGCCGGGCTGCAGCTCGGGA +
Preference number: 4 (lower is better)
Translates to: PSARAAWGSQGSSCIPGYAFLPA*PGCSSG
Trigger: TCCCGAGCTGCAGCCCGGCCACGCAGGGAGGAAGGC...GTACCCAGGAATGCAGGAGGAGCCTTGACTCCCCCAGGCTGCTCTTGCAGATGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675775.1
CDS-3UTR CCA 90 bp TCTGCAAGAGCAGCCTGGGGGAGTCAAGGCTCCTCCTGCATTCCTGGGTACCCCTCGGCGCGGGGGAGATaGATGCCGCCTGCCTTCCTC +
Preference number: 4 (lower is better)
Translates to: SARAAWGSQGSSCIPGYPSARGR*MPPAFL
Trigger: GAGGAAGGCAGGCGGCATCCATCTCCCCCGCGCCGA...GGGGTACCCAGGAATGCAGGAGGAGCCTTGACTCCCCCAGGCTGCTCTTGCAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000675775.1
CDS-3UTR CCA 90 bp GCCACTCGGACTCGTCCGGCAAACCTGCATGGCGTGAATTTACTCTGTCCGAGGGCCCAGCGACACCCATaGGAGCGGCCGCCAGGGGGA +
Preference number: 4 (lower is better)
Translates to: ATRTRPANLHGVNLLCPRAQRHP*ERPPGG
Trigger: TCCCCCTGGCGGCCGCTCCCATGGGTGTCGCTGGGC...CCTCGGACAGAGTAAATTCACGCCATGCAGGTTTGCCGGACGAGTCCGAGTGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000640909.2
CDS-3UTR CCA 90 bp CCGGCAAACCTGCATGGCGTGAATTTACTCTGTCCGAGGGTGAGGAGGGGCTGCTCGCTCTCGTCCCCTTaGCCCATCGCGGCGCCCCCT +
Preference number: 4 (lower is better)
Translates to: PANLHGVNLLCPRVRRGCSLSSP*PIAAPP
Trigger: AGGGGGCGCCGCGATGGGCCAAGGGGACGAGAGCGA...GCAGCCCCTCCTCACCCTCGGACAGAGTAAATTCACGCCATGCAGGTTTGCCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000640909.2
CDS-3UTR CCA 90 bp CGCAACTCCTCTTGGTGGCGGATAGCCGGGGTCTCACACGCCAGCTTTTGGAGGTGGGCCCCCGCCCACTaGTTCTGTCCACAAGCCCCC +
Preference number: 4 (lower is better)
Translates to: RNSSWWRIAGVSHASFWRWAPAH*FCPQAP
Trigger: GGGGGCTTGTGGACAGAACCAGTGGGCGGGGGCCCA...CCTCCAAAAGCTGGCGTGTGAGACCCCGGCTATCCGCCACCAAGAGGAGTTGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR TCA 90 bp GTACAATGCCTGGGCCACTCGGACTCGTCCGGCAAACCTGCATGGCGTGAATTTGAGCGCTGCTCTCCGTaGGCCCGGGCTCGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: VQCLGHSDSSGKPAWREFERCSP*ARARAG
Trigger: CCCAGCTCGAGCCCGGGCTCACGGAGAGCAGCGCTC...AAATTCACGCCATGCAGGTTTGCCGGACGAGTCCGAGTGGCCCAGGCATTGTAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000640909.2
CDS-3UTR TCA 90 bp GAAAAAGCTACGTCCGTCCTAGTACAATGCCTGGGCCACTCGGACTCGTCCGGCATTCGCGCTCCTCTGTaGGGTGGTCGCCGCGGCGCG +
Preference number: 4 (lower is better)
Translates to: EKATSVLVQCLGHSDSSGIRAPL*GGRRGA
Trigger: CGCGCCGCGGCGACCACCTCACAGAGGAGCGCGAAT...GCCGGACGAGTCCGAGTGGCCCAGGCATTGTACTAGGACGGACGTAGCTTTTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000640909.2
CDS-3UTR TCA 90 bp GGACTTGACCTGCCATCTGCAAGAGCAGCCTGGGGGAGTCAAGGCTCCTCCTGCGCGTGCCGCCCACGTTaGTCACGATGCGCTCGCTCT +
Preference number: 4 (lower is better)
Translates to: GLDLPSARAAWGSQGSSCACRPR*SRCARS
Trigger: AGAGCGAGCGCATCGTGATCAACGTGGGCGGCACGC...GCAGGAGGAGCCTTGACTCCCCCAGGCTGCTCTTGCAGATGGCAGGTCAAGTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675775.1
CDS-3UTR TCA 90 bp GGACTTGACCTGCCATCTGCAAGAGCAGCCTGGGGGAGTCAAGGCTCCTCCTGCCATCCGGGGAGTCACTaGGCGCCAGGCGCTTGGTCA +
Preference number: 4 (lower is better)
Translates to: GLDLPSARAAWGSQGSSCHPGSH*APGAWS
Trigger: TGACCAAGCGCCTGGCGCTCAGTGACTCCCCGGATG...GCAGGAGGAGCCTTGACTCCCCCAGGCTGCTCTTGCAGATGGCAGGTCAAGTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675775.1
CDS-3UTR TCA 90 bp TCTGCAAGAGCAGCCTGGGGGAGTCAAGGCTCCTCCTGCATTCCTGGGTACCCCGGCCCTCATCGGGAGTaGGGGCCTGGTCTATGTGGG +
Preference number: 4 (lower is better)
Translates to: SARAAWGSQGSSCIPGYPGPHRE*GPGLCG
Trigger: CCCACATAGACCAGGCCCTCACTCCCGATGAGGGCC...GGGGTACCCAGGAATGCAGGAGGAGCCTTGACTCCCCCAGGCTGCTCTTGCAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000638825.1
ENST00000675775.1
CDS-3UTR TCA 90 bp ACCCATCTGCAGGAGCGCGAGGCGGCCCGGACGATGCACGGTGCTCCAGCTTCCGACAGCCTAGCGTGCTaGCTACAAAGAGACCTGGAG +
Preference number: 4 (lower is better)
Translates to: THLQEREAARTMHGAPASDSLAC*LQRDLE
Trigger: CTCCAGGTCTCTTTGTAGTCAGCACGCTAGGCTGTC...GGAAGCTGGAGCACCGTGCATCGTCCGGGCCGCCTCGCGCTCCTGCAGATGGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638825.1
CDS-3UTR TCA 90 bp ACTCGTCCGGCAAACCTGCATGGCGTGAATTTACTCTGTCCGAGGGTGAGGAGGCAGTGCCTGGAGCCTTaGGCTCGGGCGCCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: TRPANLHGVNLLCPRVRRQCLEP*ARAPWA
Trigger: GGCCCAGGGCGCCCGAGCTCAAGGCTCCAGGCACTG...CCTCCTCACCCTCGGACAGAGTAAATTCACGCCATGCAGGTTTGCCGGACGAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638825.1
CDS-3UTR GCA 90 bp GGACTTGACCTGCCATCTGCAAGAGCAGCCTGGGGGAGTCAAGGCTCCTCCTGCTGGCTGGGTTTGATTTaGGGGGCCGGCGGGCACTGG +
Preference number: 4 (lower is better)
Translates to: GLDLPSARAAWGSQGSSCWLGLI*GAGGHW
Trigger: CCAGTGCCCGCCGGCCCCGCAAATCAAACCCAGCCA...GCAGGAGGAGCCTTGACTCCCCCAGGCTGCTCTTGCAGATGGCAGGTCAAGTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000675775.1
CDS-3UTR GCA 90 bp GGCGTGAATTTACTCTGTCCGAGGGTGAGGAGGGGCTGCAGGTCCACCCAGATGCGCGGGGGAGATGGATaGCGCCTGCCTTCCTCCCTG +
Preference number: 4 (lower is better)
Translates to: GVNLLCPRVRRGCRSTQMRGGDG*RLPSSL
Trigger: CAGGGAGGAAGGCAGGCGGCATCCATCTCCCCCGCG...CATCTGGGTGGACCTGCAGCCCCTCCTCACCCTCGGACAGAGTAAATTCACGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000640909.2
CDS-3UTR GCA 90 bp CCCAGGGGCACCAGTGAGGTTCCTCTAGCAGGCTCTTGCCTGCTGAATTTGGCCCGCGGGGGAGATGGATaGCGCCTGCCTTCCTCCCTG +
Preference number: 4 (lower is better)
Translates to: PRGTSEVPLAGSCLLNLARGGDG*RLPSSL
Trigger: CAGGGAGGAAGGCAGGCGGCATCCATCTCCCCCGCG...GGCCAAATTCAGCAGGCAAGAGCCTGCTAGAGGAACCTCACTGGTGCCCCTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR GCA 90 bp TGCAGGTCCACCCAGATGCTTAATAGCCACCAGTGTCCTCGGCCAAGCCGCCTGGGGGGAACAGAGGCCTaGGGCTCTGGCCACCCCAAC +
Preference number: 4 (lower is better)
Translates to: CRSTQMLNSHQCPRPSRLGGTEA*GSGHPN
Trigger: GTTGGGGTGGCCAGAGCCGCAGGCCTCTGTTCCCCC...CAGGCGGCTTGGCCGAGGACACTGGTGGCTATTAAGCATCTGGGTGGACCTGCA
64% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000640909.2
CDS-3UTR GCA 90 bp GAAAAAGCTACGTCCGTCCTAGTACAATGCCTGGGCCACTCGGACTCGTCCGGCGCCCAGATGCGCGGCTaGCAGCGGCGCCAAAAGCCG +
Preference number: 4 (lower is better)
Translates to: EKATSVLVQCLGHSDSSGAQMRG*QRRQKP
Trigger: CGGCTTTTGGCGCCGCTGGCAGCCGCGCATCTGGGC...GCCGGACGAGTCCGAGTGGCCCAGGCATTGTACTAGGACGGACGTAGCTTTTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000640909.2
CDS-3UTR GCA 90 bp CCATCTGCAAGAGCAGCCTGGGGGAGTCAAGGCTCCTCCTGCATTCCTGGGTACGAGCCCCCACCAGCATaGCGGACCACGTCTGCGGGT +
Preference number: 4 (lower is better)
Translates to: PSARAAWGSQGSSCIPGYEPPPA*RTTSAG
Trigger: ACCCGCAGACGTGGTCCGGCATGCTGGTGGGGGCTC...GTACCCAGGAATGCAGGAGGAGCCTTGACTCCCCCAGGCTGCTCTTGCAGATGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000675775.1
CDS-3UTR GCA 90 bp TATCTCTCGCGGGTGCCCGAGCGCGTAAAGGGCAGGCCCTCATCGGGAGTGAGGTTGGGAGATCCCAGCTaGGGTGGCCGCGGAATATGC +
Preference number: 4 (lower is better)
Translates to: YLSRVPERVKGRPSSGVRLGDPS*GGRGIC
Trigger: GCATATTCCGCGGCCACCGCAGCTGGGATCTCCCAA...CCTCACTCCCGATGAGGGCCTGCCCTTTACGCGCTCGGGCACCCGCGAGAGATA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638366.1
CDS-3UTR GCA 90 bp CCCAGGGGCACCAGTGAGGTTCCTCTAGCAGGCTCTTGCCTGCTGAATTTGGCCGAGGTGAGGGGCAGGTaGTGCTGGCACCACTGGGGG +
Preference number: 4 (lower is better)
Translates to: PRGTSEVPLAGSCLLNLAEVRGR*CWHHWG
Trigger: CCCCCAGTGGTGCCAGCAGCACCTGCCCCTCACCTC...GGCCAAATTCAGCAGGCAAGAGCCTGCTAGAGGAACCTCACTGGTGCCCCTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR GCA 90 bp GCCCAGGCGGGGGCTTCTCTGAGACCTCACTGCTGTTCTAGGTGCCATGGGCAGGCAGGCACACACGTGTaGTCGCAGACACGCTGGTCC +
Preference number: 4 (lower is better)
Translates to: AQAGASLRPHCCSRCHGQAGTHV*SQTRWS
Trigger: GGACCAGCGTGTCTGCGAGCACACGTGTGTGCCTGC...CTGCCCATGGCACCTAGAACAGCAGTGAGGTCTCAGAGAAGCCCCCGCCTGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR GCA 90 bp ACTCGGACTCGTCCGGCAAACCTGCATGGCGTGAATTTACTCTGTCCGAGGGTGCCCTGCCCACCCATCTaGAGGAGCGCGAGGCGGCCC +
Preference number: 4 (lower is better)
Translates to: TRTRPANLHGVNLLCPRVPCPPI*RSARRP
Trigger: GGGCCGCCTCGCGCTCCTGCAGATGGGTGGGCAGGG...CACCCTCGGACAGAGTAAATTCACGCCATGCAGGTTTGCCGGACGAGTCCGAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638825.1
CDS-3UTR GCA 90 bp CAAGAGCAGCCTGGGGGAGTCAAGGCTCCTCCTGCATTCCTGGGTACCCCTGCCGATTCCCTCCATCCTTaGCCCCCTCGGTGTGCCTGC +
Preference number: 4 (lower is better)
Translates to: QEQPGGVKAPPAFLGTPADSLHP*PPRCAC
Trigger: GCAGGCACACCGAGGGGGGCAAGGATGGAGGGAATC...GGCAGGGGTACCCAGGAATGCAGGAGGAGCCTTGACTCCCCCAGGCTGCTCTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000638825.1
ENST00000675775.1
CDS-3UTR GCA 90 bp CAAGAGCAGCCTGGGGGAGTCAAGGCTCCTCCTGCATTCCTGGGTACCCCTGCCCCTGGCCCACTCCACTaGCCTCCTCAATCAGGGGAG +
Preference number: 4 (lower is better)
Translates to: QEQPGGVKAPPAFLGTPAPGPLH*PPQSGE
Trigger: CTCCCCTGATTGAGGAGGGCAGTGGAGTGGGCCAGG...GGCAGGGGTACCCAGGAATGCAGGAGGAGCCTTGACTCCCCCAGGCTGCTCTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000638825.1
ENST00000675775.1
CDS-3UTR GCA 90 bp CCACCAGTGTCCTCGGCCAAGCCGCCTGGTCAAGTCACTCTCACAGCCTCTGTCGGGAGTTGCGCACCGTaGCCCGGCTCAAAGGACCTC +
Preference number: 4 (lower is better)
Translates to: PPVSSAKPPGQVTLTASVGSCAP*PGSKDL
Trigger: GAGGTCCTTTGAGCCGGGGCACGGTGCGCAACTCCC...GACAGAGGCTGTGAGAGTGACTTGACCAGGCGGCTTGGCCGAGGACACTGGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638825.1
CDS-3UTR GCA 90 bp CGTCCTAGTACAATGCCTGGGCCACTCGGACTCGTCCGGCAAACCTGCATGGCGGGCAGCCCTCCGCCATaGAGCACCATGCGGGGAGTT +
Preference number: 4 (lower is better)
Translates to: RPSTMPGPLGLVRQTCMAGSPPP*STMRGV
Trigger: AACTCCCCGCATGGTGCTGCATGGCGGAGGGCTGCC...CGCCATGCAGGTTTGCCGGACGAGTCCGAGTGGCCCAGGCATTGTACTAGGACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638825.1
CDS-3UTR CCA 90 bp AAAAGCTACGTCCGTCCTAGTACAATGCCTGGGCCACTCGGACTCGTCCGGCAAGGCTGCGCTCGGACTTaGGCTCCCGCGGCGGTGCTG +
Preference number: 4 (lower is better)
Translates to: KSYVRPSTMPGPLGLVRQGCART*APAAVL
Trigger: CAGCACCGCCGCGGGAGCCCAAGTCCGAGCGCAGCC...TTGCCGGACGAGTCCGAGTGGCCCAGGCATTGTACTAGGACGGACGTAGCTTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000640909.2
CDS-3UTR CCA 90 bp CCCAGGGGCACCAGTGAGGTTCCTCTAGCAGGCTCTTGCCTGCTGAATTTGGCCGAGCTGGGGTTCCGCTaGGCTGCGCTCGGACTTGGG +
Preference number: 4 (lower is better)
Translates to: PRGTSEVPLAGSCLLNLAELGFR*AALGLG
Trigger: CCCAAGTCCGAGCGCAGCCCAGCGGAACCCCAGCTC...GGCCAAATTCAGCAGGCAAGAGCCTGCTAGAGGAACCTCACTGGTGCCCCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CCA 90 bp CCATCTGCAAGAGCAGCCTGGGGGAGTCAAGGCTCCTCCTGCATTCCTGGGTACGAGCTGGGGTTCCGCTaGGCTGCGCTCGGACTTGGG +
Preference number: 4 (lower is better)
Translates to: PSARAAWGSQGSSCIPGYELGFR*AALGLG
Trigger: CCCAAGTCCGAGCGCAGCCCAGCGGAACCCCAGCTC...GTACCCAGGAATGCAGGAGGAGCCTTGACTCCCCCAGGCTGCTCTTGCAGATGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675775.1
CDS-3UTR CCA 90 bp AGCCCGAAATCAGGGCAGGAATTCTACTCAGCTATGGAGACAGGCTCTGCCGGGAGCCCGGGCTCGAGCTaGGGTTCCGCTGGGCTGCGC +
Preference number: 4 (lower is better)
Translates to: SPKSGQEFYSAMETGSAGSPGSS*GSAGLR
Trigger: GCGCAGCCCAGCGGAACCCCAGCTCGAGCCCGGGCT...CCCGGCAGAGCCTGTCTCCATAGCTGAGTAGAATTCCTGCCCTGATTTCGGGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CCA 90 bp CAGAGGACCTGCCCAGGCAGACTAAGAAAGCAGATCTCCCACCACTCAGCCCAGGCCTTCCTCCCTGCGTaGCCGGGCTGCAGCTCGGGA +
Preference number: 4 (lower is better)
Translates to: QRTCPGRLRKQISHHSAQAFLPA*PGCSSG
Trigger: TCCCGAGCTGCAGCCCGGCCACGCAGGGAGGAAGGC...CTGGGCTGAGTGGTGGGAGATCTGCTTTCTTAGTCTGCCTGGGCAGGTCCTCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000639325.2
ENST00000640318.2
CDS-3UTR CCA 90 bp GTCCTCAGCAACCTGGCGGGCCGCGTTGTCTCTTCAGAACATCACGAGACCAACCGCTCCTCTGTGAGGTaGTCGCCGCGGCGCGCTCTC +
Preference number: 4 (lower is better)
Translates to: VLSNLAGRVVSSEHHETNRSSVR*SPRRAL
Trigger: GAGAGCGCGCCGCGGCGACCACCTCACAGAGGAGCG...GTTGGTCTCGTGATGTTCTGAAGAGACAACGCGGCCCGCCAGGTTGCTGAGGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CCA 90 bp CTCCTGCATTCCTGGGTACCCCTGCCTTGGGGTCATGGCCTAAAGTCAACCTGTGCCCAGCGACACCCATaGGAGCGGCCGCCAGGGGGA +
Preference number: 4 (lower is better)
Translates to: LLHSWVPLPWGHGLKSTCAQRHP*ERPPGG
Trigger: TCCCCCTGGCGGCCGCTCCCATGGGTGTCGCTGGGC...ACAGGTTGACTTTAGGCCATGACCCCAAGGCAGGGGTACCCAGGAATGCAGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000675775.1
CDS-3UTR CCA 90 bp GACCCCTGGCCATGTTCCTCTCAGGCACCTACAGAAATCCCAGGAAGGGAAGGGTCGCTCTCGTCCCCTTaGCCCATCGCGGCGCCCCCT +
Preference number: 4 (lower is better)
Translates to: DPWPCSSQAPTEIPGREGSLSSP*PIAAPP
Trigger: AGGGGGCGCCGCGATGGGCCAAGGGGACGAGAGCGA...CCCTTCCCTTCCTGGGATTTCTGTAGGTGCCTGAGAGGAACATGGCCAGGGGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CCA 90 bp CGGACTCGTCCGGCAAACCTGCATGGCGTGAATTTACTCTGTCCGAGGGTGAGGTCGCTCTCGTCCCCTTaGCCCATCGCGGCGCCCCCT +
Preference number: 4 (lower is better)
Translates to: RTRPANLHGVNLLCPRVRSLSSP*PIAAPP
Trigger: AGGGGGCGCCGCGATGGGCCAAGGGGACGAGAGCGA...CCTCACCCTCGGACAGAGTAAATTCACGCCATGCAGGTTTGCCGGACGAGTCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000640909.2
CDS-3UTR CCA 90 bp GCAAGAGCAGCCTGGGGGAGTCAAGGCTCCTCCTGCATTCCTGGGTACCCCTGCTGTGCTCACTGGCGCTaGGGTCATTGGGCTGTGCCC +
Preference number: 4 (lower is better)
Translates to: ARAAWGSQGSSCIPGYPCCAHWR*GHWAVP
Trigger: GGGCACAGCCCAATGACCCCAGCGCCAGTGAGCACA...GCAGGGGTACCCAGGAATGCAGGAGGAGCCTTGACTCCCCCAGGCTGCTCTTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675775.1
CDS-3UTR CCA 90 bp CCCGAGCGCGTAAAGGGCAGGCCCTCATCGGGAGTGAGGGCCTGGTCTATGTGGAGGGCCTGGTCTATGTaGGGGCAGTCTTCGTTCGCC +
Preference number: 4 (lower is better)
Translates to: PERVKGRPSSGVRAWSMWRAWSM*GQSSFA
Trigger: GGCGAACGAAGACTGCCCCCACATAGACCAGGCCCT...CCACATAGACCAGGCCCTCACTCCCGATGAGGGCCTGCCCTTTACGCGCTCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638366.1
CDS-3UTR CCA 90 bp GCCCAGGCGGGGGCTTCTCTGAGACCTCACTGCTGTTCTAGGTGCCATGGGCAGTGCTCGCAGACACGCTaGTCCTGCCTCCCACTCTGG +
Preference number: 4 (lower is better)
Translates to: AQAGASLRPHCCSRCHGQCSQTR*SCLPLW
Trigger: CCAGAGTGGGAGGCAGGACCAGCGTGTCTGCGAGCA...CTGCCCATGGCACCTAGAACAGCAGTGAGGTCTCAGAGAAGCCCCCGCCTGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CCA 90 bp GCCTGGGCCACTCGGACTCGTCCGGCAAACCTGCATGGCGTGAATTTACTCTGTGTCCGGGCCAGTGCCTaGAGCCTTGAGCTCGGGCGC +
Preference number: 4 (lower is better)
Translates to: AWATRTRPANLHGVNLLCVRASA*SLELGR
Trigger: GCGCCCGAGCTCAAGGCTCCAGGCACTGGCCCGGAC...ACAGAGTAAATTCACGCCATGCAGGTTTGCCGGACGAGTCCGAGTGGCCCAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638825.1
CDS-3UTR CCA 90 bp AGAACCACGTTCCCTCGTCTCCGTGCGGGCTGCCTCTCCTCTTCTAGGTTTGCCGGCCGGTGCCAAGGATaGGACCCTCCCGAAGGCTGG +
Preference number: 4 (lower is better)
Translates to: RTTFPRLRAGCLSSSRFAGRCQG*DPPEGW
Trigger: CCAGCCTTCGGGAGGGTCCCATCCTTGGCACCGGCC...GGCAAACCTAGAAGAGGAGAGGCAGCCCGCACGGAGACGAGGGAACGTGGTTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638825.1
CDS-3UTR TCA 90 bp TCCGGCAAACCTGCATGGCGTGAATTTACTCTGTCCGAGGGTGAGGAGGGGCTGTCTCCTGGCTGGGTTTaGTTTGCGGGGCCGGCGGGC +
Preference number: 4 (lower is better)
Translates to: SGKPAWREFTLSEGEEGLSPGWV*FAGPAG
Trigger: GCCCGCCGGCCCCGCAAATCAAACCCAGCCAGGAGA...CAGCCCCTCCTCACCCTCGGACAGAGTAAATTCACGCCATGCAGGTTTGCCGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000640909.2
CDS-3UTR TCA 90 bp TCGGAGACCCCTGGCCATGTTCCTCTCAGGCACCTACAGAAATCCCAGGAAGGGTCTCCTGGCTGGGTTTaGTTTGCGGGGCCGGCGGGC +
Preference number: 4 (lower is better)
Translates to: SETPGHVPLRHLQKSQEGSPGWV*FAGPAG
Trigger: GCCCGCCGGCCCCGCAAATCAAACCCAGCCAGGAGA...CCCTTCCTGGGATTTCTGTAGGTGCCTGAGAGGAACATGGCCAGGGGTCTCCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR TCA 90 bp CACCACTCAGCCCAGGCCCCTTTGCTTCAAATCGTGTCTCAGAGGGAGAACAGTGAGCGCTGCTCTCCGTaGGCCCGGGCTCGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: HHSAQAPLLQIVSQRENSERCSP*ARARAG
Trigger: CCCAGCTCGAGCCCGGGCTCACGGAGAGCAGCGCTC...ACTGTTCTCCCTCTGAGACACGATTTGAAGCAAAGGGGCCTGGGCTGAGTGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000639325.2
ENST00000640318.2
CDS-3UTR TCA 90 bp GGCGTGAATTTACTCTGTCCGAGGGTGAGGAGGGGCTGCAGGTCCACCCAGATGGCGTGCCGCCCACGTTaGTCACGATGCGCTCGCTCT +
Preference number: 4 (lower is better)
Translates to: GVNLLCPRVRRGCRSTQMACRPR*SRCARS
Trigger: AGAGCGAGCGCATCGTGATCAACGTGGGCGGCACGC...CATCTGGGTGGACCTGCAGCCCCTCCTCACCCTCGGACAGAGTAAATTCACGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000640909.2
CDS-3UTR TCA 90 bp CATGGCGTGAATTTACTCTGTCCGAGGGTGAGGAGGGGCTGCAGGTCCACCCAGCATCCGGGGAGTCACTaGGCGCCAGGCGCTTGGTCA +
Preference number: 4 (lower is better)
Translates to: HGVNLLCPRVRRGCRSTQHPGSH*APGAWS
Trigger: TGACCAAGCGCCTGGCGCTCAGTGACTCCCCGGATG...CTGGGTGGACCTGCAGCCCCTCCTCACCCTCGGACAGAGTAAATTCACGCCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000640909.2
CDS-3UTR TCA 90 bp TGCAGGTCCACCCAGATGCTTAATAGCCACCAGTGTCCTCGGCCAAGCCGCCTGCATCCGGGGAGTCACTaGGCGCCAGGCGCTTGGTCA +
Preference number: 4 (lower is better)
Translates to: CRSTQMLNSHQCPRPSRLHPGSH*APGAWS
Trigger: TGACCAAGCGCCTGGCGCTCAGTGACTCCCCGGATG...CAGGCGGCTTGGCCGAGGACACTGGTGGCTATTAAGCATCTGGGTGGACCTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000640909.2
CDS-3UTR TCA 90 bp CCCAGGGGCACCAGTGAGGTTCCTCTAGCAGGCTCTTGCCTGCTGAATTTGGCCACCCTTCTCTGGCTCTaGATGCTGGGCCCCCGCCCA +
Preference number: 4 (lower is better)
Translates to: PRGTSEVPLAGSCLLNLATLLWL*MLGPRP
Trigger: TGGGCGGGGGCCCAGCATTCAGAGCCAGAGAAGGGT...GGCCAAATTCAGCAGGCAAGAGCCTGCTAGAGGAACCTCACTGGTGCCCCTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR TCA 90 bp ACCCATCTGCAGGAGCGCGAGGCGGCCCGGACGATGCACGGTGCTCCAGCTTCCTTTGCCTTTGGGACTTaGCCTGCCATCTGCAAGAGC +
Preference number: 4 (lower is better)
Translates to: THLQEREAARTMHGAPASFAFGT*PAICKS
Trigger: GCTCTTGCAGATGGCAGGTCAAGTCCCAAAGGCAAA...GGAAGCTGGAGCACCGTGCATCGTCCGGGCCGCCTCGCGCTCCTGCAGATGGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638825.1
ENST00000675775.1
CDS-3UTR TCA 90 bp CGTCCTAGTACAATGCCTGGGCCACTCGGACTCGTCCGGCAAACCTGCATGGCGGGTTTGCCCATGCACTaGGCCAGCCTAGCACGCCTC +
Preference number: 4 (lower is better)
Translates to: RPSTMPGPLGLVRQTCMAGLPMH*ASLARL
Trigger: GAGGCGTGCTAGGCTGGCTCAGTGCATGGGCAAACC...CGCCATGCAGGTTTGCCGGACGAGTCCGAGTGGCCCAGGCATTGTACTAGGACG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638825.1
CDS-3UTR GCA 90 bp GTACAATGCCTGGGCCACTCGGACTCGTCCGGCAAACCTGCATGGCGTGAATTTTGGCTCCGGTGCCTCTaGGCCCCGCACTCCGCTCCT +
Preference number: 4 (lower is better)
Translates to: VQCLGHSDSSGKPAWREFWLRCL*APHSAP
Trigger: AGGAGCGGAGTGCGGGGCGCAGAGGCACCGGAGCCA...AAATTCACGCCATGCAGGTTTGCCGGACGAGTCCGAGTGGCCCAGGCATTGTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000640909.2
CDS-3UTR GCA 90 bp CAATGCCTGGGCCACTCGGACTCGTCCGGCAAACCTGCATGGCGTGAATTTACTTGGCTCCGGTGCCTCTaGGCCCCGCACTCCGCTCCT +
Preference number: 4 (lower is better)
Translates to: QCLGHSDSSGKPAWREFTWLRCL*APHSAP
Trigger: AGGAGCGGAGTGCGGGGCGCAGAGGCACCGGAGCCA...AGTAAATTCACGCCATGCAGGTTTGCCGGACGAGTCCGAGTGGCCCAGGCATTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000640909.2
CDS-3UTR GCA 90 bp CCGGCAAACCTGCATGGCGTGAATTTACTCTGTCCGAGGGTGAGGAGGGGCTGCTGGCTGGGTTTGATTTaGGGGGCCGGCGGGCACTGG +
Preference number: 4 (lower is better)
Translates to: PANLHGVNLLCPRVRRGCWLGLI*GAGGHW
Trigger: CCAGTGCCCGCCGGCCCCGCAAATCAAACCCAGCCA...GCAGCCCCTCCTCACCCTCGGACAGAGTAAATTCACGCCATGCAGGTTTGCCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000640909.2
CDS-3UTR GCA 90 bp CTGCATGGCGTGAATTTACTCTGTCCGAGGGTGAGGAGGGGCTGCAGGTCCACCGAGATGGATGCCGCCTaGCTTCCTCCCTGCGTGGCC +
Preference number: 4 (lower is better)
Translates to: LHGVNLLCPRVRRGCRSTEMDAA*LPPCVA
Trigger: GGCCACGCAGGGAGGAAGGCAGGCGGCATCCATCTC...GGTGGACCTGCAGCCCCTCCTCACCCTCGGACAGAGTAAATTCACGCCATGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000640909.2
CDS-3UTR GCA 90 bp GGCGTGAATTTACTCTGTCCGAGGGTGAGGAGGGGCTGCAGGTCCACCCAGATGGAGATGGATGCCGCCTaGCTTCCTCCCTGCGTGGCC +
Preference number: 4 (lower is better)
Translates to: GVNLLCPRVRRGCRSTQMEMDAA*LPPCVA
Trigger: GGCCACGCAGGGAGGAAGGCAGGCGGCATCCATCTC...CATCTGGGTGGACCTGCAGCCCCTCCTCACCCTCGGACAGAGTAAATTCACGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000640909.2
CDS-3UTR GCA 90 bp GTGAATTTACTCTGTCCGAGGGTGAGGAGGGGCTGCAGGTCCACCCAGATGCTTGCCCAGATGCGCGGCTaGCAGCGGCGCCAAAAGCCG +
Preference number: 4 (lower is better)
Translates to: VNLLCPRVRRGCRSTQMLAQMRG*QRRQKP
Trigger: CGGCTTTTGGCGCCGCTGGCAGCCGCGCATCTGGGC...AAGCATCTGGGTGGACCTGCAGCCCCTCCTCACCCTCGGACAGAGTAAATTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000640909.2
CDS-3UTR GCA 90 bp CGTCCTAGTACAATGCCTGGGCCACTCGGACTCGTCCGGCAAACCTGCATGGCGCAGCACGTCCTTGGCTaGCTTGGAGGACAGGCCGCT +
Preference number: 4 (lower is better)
Translates to: RPSTMPGPLGLVRQTCMAQHVLG*LGGQAA
Trigger: AGCGGCCTGTCCTCCAAGGCAGCCAAGGACGTGCTG...CGCCATGCAGGTTTGCCGGACGAGTCCGAGTGGCCCAGGCATTGTACTAGGACG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000640909.2
CDS-3UTR GCA 90 bp GAAAAAGCTACGTCCGTCCTAGTACAATGCCTGGGCCACTCGGACTCGTCCGGCGAGCCCCCACCAGCATaGCGGACCACGTCTGCGGGT +
Preference number: 4 (lower is better)
Translates to: EKATSVLVQCLGHSDSSGEPPPA*RTTSAG
Trigger: ACCCGCAGACGTGGTCCGGCATGCTGGTGGGGGCTC...GCCGGACGAGTCCGAGTGGCCCAGGCATTGTACTAGGACGGACGTAGCTTTTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000640909.2
CDS-3UTR GCA 90 bp CCTGGCGGGCCGCGTTGTCTCTTCAGAACATCACGAGACCAACCGCGTCAACCTCTCACACCGGACTCCTaGCCCACCAAGCAGAGCCCC +
Preference number: 4 (lower is better)
Translates to: PGGPRCLFRTSRDQPRQPLTPDS*PTKQSP
Trigger: GGGGCTCTGCTTGGTGGGGCAGGAGTCCGGTGTGAG...AGGTTGACGCGGTTGGTCTCGTGATGTTCTGAAGAGACAACGCGGCCCGCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR GCA 90 bp CAGGCACCGCCAAAGTACTTACTGTTCACACCAGCTGCGGGCACCGGAGGGGCGCCACCGGGAAGTGAGTaGTTGGGAAGGGCTTGGGAG +
Preference number: 4 (lower is better)
Translates to: QAPPKYLLFTPAAGTGGAPPGSE*LGRAWE
Trigger: CTCCCAAGCCCTTCCCAAGCACTCACTTCCCGGTGG...CGCCCCTCCGGTGCCCGCAGCTGGTGTGAACAGTAAGTACTTTGGCGGTGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR GCA 90 bp GACCCCTGGCCATGTTCCTCTCAGGCACCTACAGAAATCCCAGGAAGGGAAGGGACTGACGTGGGACCCTaGAGCCCTGGACGCGGCACC +
Preference number: 4 (lower is better)
Translates to: DPWPCSSQAPTEIPGREGTDVGP*SPGRGT
Trigger: GGTGCCGCGTCCAGGGCTGCAGGGTCCCACGTCAGT...CCCTTCCCTTCCTGGGATTTCTGTAGGTGCCTGAGAGGAACATGGCCAGGGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR GCA 90 bp CAGGCACCGCCAAAGTACTTACTGTTCACACCAGCTGCGGGCACCGGAGGGGCGCACAGCTGGCTTTTCTaGCCTGGTCTCCAGGCACCG +
Preference number: 4 (lower is better)
Translates to: QAPPKYLLFTPAAGTGGAHSWLF*PGLQAP
Trigger: CGGTGCCTGGAGACCAGGGCAGAAAAGCCAGCTGTG...CGCCCCTCCGGTGCCCGCAGCTGGTGTGAACAGTAAGTACTTTGGCGGTGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CCA 90 bp GCCCAGGCGGGGGCTTCTCTGAGACCTCACTGCTGTTCTAGGTGCCATGGGCAGAGGCGGGGGTTCTCCTaGCTGGGTTTGATTTGCGGG +
Preference number: 4 (lower is better)
Translates to: AQAGASLRPHCCSRCHGQRRGFS*LGLICG
Trigger: CCCGCAAATCAAACCCAGCCAGGAGAACCCCCGCCT...CTGCCCATGGCACCTAGAACAGCAGTGAGGTCTCAGAGAAGCCCCCGCCTGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CCA 90 bp GCCACTCGGACTCGTCCGGCAAACCTGCATGGCGTGAATTTACTCTGTCCGAGGGAGCTGGGGTTCCGCTaGGCTGCGCTCGGACTTGGG +
Preference number: 4 (lower is better)
Translates to: ATRTRPANLHGVNLLCPRELGFR*AALGLG
Trigger: CCCAAGTCCGAGCGCAGCCCAGCGGAACCCCAGCTC...CCTCGGACAGAGTAAATTCACGCCATGCAGGTTTGCCGGACGAGTCCGAGTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000640909.2
CDS-3UTR CCA 90 bp CACCACTCAGCCCAGGCCCCTTTGCTTCAAATCGTGTCTCAGAGGGAGAACAGTAGCCCGGGCTCGAGCTaGGGTTCCGCTGGGCTGCGC +
Preference number: 4 (lower is better)
Translates to: HHSAQAPLLQIVSQRENSSPGSS*GSAGLR
Trigger: GCGCAGCCCAGCGGAACCCCAGCTCGAGCCCGGGCT...ACTGTTCTCCCTCTGAGACACGATTTGAAGCAAAGGGGCCTGGGCTGAGTGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000639325.2
ENST00000640318.2
CDS-3UTR CCA 90 bp CAATGCCTGGGCCACTCGGACTCGTCCGGCAAACCTGCATGGCGTGAATTTACTGCCTTCCTCCCTGCGTaGCCGGGCTGCAGCTCGGGA +
Preference number: 4 (lower is better)
Translates to: QCLGHSDSSGKPAWREFTAFLPA*PGCSSG
Trigger: TCCCGAGCTGCAGCCCGGCCACGCAGGGAGGAAGGC...AGTAAATTCACGCCATGCAGGTTTGCCGGACGAGTCCGAGTGGCCCAGGCATTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000640909.2
CDS-3UTR CCA 90 bp GACCCCTGGCCATGTTCCTCTCAGGCACCTACAGAAATCCCAGGAAGGGAAGGGTCGGCGCGGGGGAGATaGATGCCGCCTGCCTTCCTC +
Preference number: 4 (lower is better)
Translates to: DPWPCSSQAPTEIPGREGSARGR*MPPAFL
Trigger: GAGGAAGGCAGGCGGCATCCATCTCCCCCGCGCCGA...CCCTTCCCTTCCTGGGATTTCTGTAGGTGCCTGAGAGGAACATGGCCAGGGGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CCA 90 bp GTGAATTTACTCTGTCCGAGGGTGAGGAGGGGCTGCAGGTCCACCCAGATGCTTCGCTCCTCTGTGAGGTaGTCGCCGCGGCGCGCTCTC +
Preference number: 4 (lower is better)
Translates to: VNLLCPRVRRGCRSTQMLRSSVR*SPRRAL
Trigger: GAGAGCGCGCCGCGGCGACCACCTCACAGAGGAGCG...AAGCATCTGGGTGGACCTGCAGCCCCTCCTCACCCTCGGACAGAGTAAATTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000640909.2
CDS-3UTR CCA 90 bp GGCCGTAGAAAAAGCTACGTCCGTCCTAGTACAATGCCTGGGCCACTCGGACTCCGCTCCTCTGTGAGGTaGTCGCCGCGGCGCGCTCTC +
Preference number: 4 (lower is better)
Translates to: GRRKSYVRPSTMPGPLGLRSSVR*SPRRAL
Trigger: GAGAGCGCGCCGCGGCGACCACCTCACAGAGGAGCG...GAGTCCGAGTGGCCCAGGCATTGTACTAGGACGGACGTAGCTTTTTCTACGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000640909.2
CDS-3UTR CCA 90 bp GCCACTCGGACTCGTCCGGCAAACCTGCATGGCGTGAATTTACTCTGTCCGAGGAGAGGCCTGCGGCTCTaGCCACCCCAACGAGCGAGC +
Preference number: 4 (lower is better)
Translates to: ATRTRPANLHGVNLLCPRRGLRL*PPQRAS
Trigger: GCTCGCTCGTTGGGGTGGCCAGAGCCGCAGGCCTCT...CCTCGGACAGAGTAAATTCACGCCATGCAGGTTTGCCGGACGAGTCCGAGTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000640909.2
CDS-3UTR CCA 90 bp TGGGAGAGGGGAGGGAAACAGTATGGAGAGGACGCGGATGACGATGTGGGGGTTAGAGGCCTGCGGCTCTaGCCACCCCAACGAGCGAGC +
Preference number: 4 (lower is better)
Translates to: WERGGKQYGEDADDDVGVRGLRL*PPQRAS
Trigger: GCTCGCTCGTTGGGGTGGCCAGAGCCGCAGGCCTCT...AACCCCCACATCGTCATCCGCGTCCTCTCCATACTGTTTCCCTCCCCTCTCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CCA 90 bp CGGACTCGTCCGGCAAACCTGCATGGCGTGAATTTACTCTGTCCGAGGGTGAGGAGAGGCCTGCGGCTCTaGCCACCCCAACGAGCGAGC +
Preference number: 4 (lower is better)
Translates to: RTRPANLHGVNLLCPRVRRGLRL*PPQRAS
Trigger: GCTCGCTCGTTGGGGTGGCCAGAGCCGCAGGCCTCT...CCTCACCCTCGGACAGAGTAAATTCACGCCATGCAGGTTTGCCGGACGAGTCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000640909.2
CDS-3UTR CCA 90 bp TGCCAAAAGGCTCCAGCTGCAGCCTGTCTCCATGAAGGCATAGAAGGGGACCATGCCCAGCGACACCCATaGGAGCGGCCGCCAGGGGGA +
Preference number: 4 (lower is better)
Translates to: CQKAPAAACLHEGIEGDHAQRHP*ERPPGG
Trigger: TCCCCCTGGCGGCCGCTCCCATGGGTGTCGCTGGGC...ATGGTCCCCTTCTATGCCTTCATGGAGACAGGCTGCAGCTGGAGCCTTTTGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000639325.2
ENST00000640318.2
CDS-3UTR CCA 90 bp CAAGAGCAGCCTGGGGGAGTCAAGGCTCCTCCTGCATTCCTGGGTACCCCTGCCTCGGGAGTGAGGGCCTaGTCTATGTGGGGGCAGTCT +
Preference number: 4 (lower is better)
Translates to: QEQPGGVKAPPAFLGTPASGVRA*SMWGQS
Trigger: AGACTGCCCCCACATAGACCAGGCCCTCACTCCCGA...GGCAGGGGTACCCAGGAATGCAGGAGGAGCCTTGACTCCCCCAGGCTGCTCTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000638825.1
ENST00000675775.1
CDS-3UTR CCA 90 bp GGGAGAGACTGTGGAGCTCAGGGGCAATCCCACAGGAGTGCATGGGTTTTACAGGGCCCACATGGAAGCTaGGGCCTGGGCCAGCCCACG +
Preference number: 4 (lower is better)
Translates to: GRDCGAQGQSHRSAWVLQGPHGS*GLGQPT
Trigger: CGTGGGCTGGCCCAGGCCCCAGCTTCCATGTGGGCC...CTGTAAAACCCATGCACTCCTGTGGGATTGCCCCTGAGCTCCACAGTCTCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CCA 90 bp TGGGAGAGGGGAGGGAAACAGTATGGAGAGGACGCGGATGACGATGTGGGGGTTGCCCTAGGCAATCCCTaGCTGTGCCAGGGCGCCCTC +
Preference number: 4 (lower is better)
Translates to: WERGGKQYGEDADDDVGVALGNP*LCQGAL
Trigger: GAGGGCGCCCTGGCACAGCCAGGGATTGCCTAGGGC...AACCCCCACATCGTCATCCGCGTCCTCTCCATACTGTTTCCCTCCCCTCTCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CCA 90 bp CTGCCTCTGTGGAGATGGTGCCGCCTGAGACCCTTCTCTGGCTCTGAATGCTGGGGCACCTTTCCCTCCTaGGGGATTCCCGGGACACCC +
Preference number: 4 (lower is better)
Translates to: LPLWRWCRLRPFSGSECWGTFPS*GIPGTP
Trigger: GGGTGTCCCGGGAATCCCCCAGGAGGGAAAGGTGCC...CCAGCATTCAGAGCCAGAGAAGGGTCTCAGGCGGCACCATCTCCACAGAGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CCA 90 bp GCCCAGGCGGGGGCTTCTCTGAGACCTCACTGCTGTTCTAGGTGCCATGGGCAGTCAAGGGGAGAACAGTaGGTCCTCCCAGGCAGCGTC +
Preference number: 4 (lower is better)
Translates to: AQAGASLRPHCCSRCHGQSRGEQ*VLPGSV
Trigger: GACGCTGCCTGGGAGGACCCACTGTTCTCCCCTTGA...CTGCCCATGGCACCTAGAACAGCAGTGAGGTCTCAGAGAAGCCCCCGCCTGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CCA 90 bp GCAAGAGCAGCCTGGGGGAGTCAAGGCTCCTCCTGCATTCCTGGGTACCCCTGCCATCAGGCCCATCCATaGCCGGTGCCAAGGATGGGA +
Preference number: 4 (lower is better)
Translates to: ARAAWGSQGSSCIPGYPCHQAHP*PVPRMG
Trigger: TCCCATCCTTGGCACCGGCCATGGATGGGCCTGATG...GCAGGGGTACCCAGGAATGCAGGAGGAGCCTTGACTCCCCCAGGCTGCTCTTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638825.1
CDS-3UTR TCA 90 bp ACTCGTCCGGCAAACCTGCATGGCGTGAATTTACTCTGTCCGAGGGTGAGGAGGTCTCCTGGCTGGGTTTaGTTTGCGGGGCCGGCGGGC +
Preference number: 4 (lower is better)
Translates to: TRPANLHGVNLLCPRVRRSPGWV*FAGPAG
Trigger: GCCCGCCGGCCCCGCAAATCAAACCCAGCCAGGAGA...CCTCCTCACCCTCGGACAGAGTAAATTCACGCCATGCAGGTTTGCCGGACGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000640909.2
CDS-3UTR TCA 90 bp GAAAAAGCTACGTCCGTCCTAGTACAATGCCTGGGCCACTCGGACTCGTCCGGCGCGTGCCGCCCACGTTaGTCACGATGCGCTCGCTCT +
Preference number: 4 (lower is better)
Translates to: EKATSVLVQCLGHSDSSGACRPR*SRCARS
Trigger: AGAGCGAGCGCATCGTGATCAACGTGGGCGGCACGC...GCCGGACGAGTCCGAGTGGCCCAGGCATTGTACTAGGACGGACGTAGCTTTTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000640909.2
CDS-3UTR TCA 90 bp GCAAACCTGCATGGCGTGAATTTACTCTGTCCGAGGGTGAGGAGGGGCTGCAGGGGCCCTCATCGGGAGTaGGGGCCTGGTCTATGTGGG +
Preference number: 4 (lower is better)
Translates to: ANLHGVNLLCPRVRRGCRGPHRE*GPGLCG
Trigger: CCCACATAGACCAGGCCCTCACTCCCGATGAGGGCC...CCTGCAGCCCCTCCTCACCCTCGGACAGAGTAAATTCACGCCATGCAGGTTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265969.8
ENST00000638366.1
ENST00000638825.1
ENST00000640909.2
CDS-3UTR TCA 90 bp CATGGCGTGAATTTACTCTGTCCGAGGGTGAGGAGGGGCTGCAGGTCCACCCAGTACTCTGTCCGAGGGTaGGGAGGGGCTGCAGGTCCA +
Preference number: 4 (lower is better)
Translates to: HGVNLLCPRVRRGCRSTQYSVRG*GGAAGP
Trigger: TGGACCTGCAGCCCCTCCTCACCCTCGGACAGAGTA...CTGGGTGGACCTGCAGCCCCTCCTCACCCTCGGACAGAGTAAATTCACGCCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265969.8
ENST00000638366.1
ENST00000638825.1
ENST00000640909.2
CDS-3UTR TCA 90 bp AAGCAGAGAGCTCGGAGCTGTTTCAGCCTCGGAGACCCCTGGCCATGTTCCTCTGGGTATGCGGCAGGGTaGAAGGACCGGGAAACCCCC +
Preference number: 4 (lower is better)
Translates to: KQRARSCFSLGDPWPCSSGYAAG*KDRETP
Trigger: GGGGGTTTCCCGGTCCTTTCACCCTGCCGCATACCC...AGAGGAACATGGCCAGGGGTCTCCGAGGCTGAAACAGCTCCGAGCTCTCTGCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR GCA 90 bp GCCCAAAGTTCGGGATGGTTTTGGGCAGGGGACAAGGAACATCCATCAGGGATCTGGCTCCGGTGCCTCTaGGCCCCGCACTCCGCTCCT +
Preference number: 4 (lower is better)
Translates to: AQSSGWFWAGDKEHPSGIWLRCL*APHSAP
Trigger: AGGAGCGGAGTGCGGGGCGCAGAGGCACCGGAGCCA...GATCCCTGATGGATGTTCCTTGTCCCCTGCCCAAAACCATCCCGAACTTTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR GCA 90 bp CAGAGGACCTGCCCAGGCAGACTAAGAAAGCAGATCTCCCACCACTCAGCCCAGGAGATGGATGCCGCCTaGCTTCCTCCCTGCGTGGCC +
Preference number: 4 (lower is better)
Translates to: QRTCPGRLRKQISHHSAQEMDAA*LPPCVA
Trigger: GGCCACGCAGGGAGGAAGGCAGGCGGCATCCATCTC...CTGGGCTGAGTGGTGGGAGATCTGCTTTCTTAGTCTGCCTGGGCAGGTCCTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000639325.2
ENST00000640318.2
CDS-3UTR GCA 90 bp ACTCGTCCGGCAAACCTGCATGGCGTGAATTTACTCTGTCCGAGGGTGAGGAGGCGCGGGGGAGATGGATaGCGCCTGCCTTCCTCCCTG +
Preference number: 4 (lower is better)
Translates to: TRPANLHGVNLLCPRVRRRGGDG*RLPSSL
Trigger: CAGGGAGGAAGGCAGGCGGCATCCATCTCCCCCGCG...CCTCCTCACCCTCGGACAGAGTAAATTCACGCCATGCAGGTTTGCCGGACGAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000640909.2
CDS-3UTR GCA 90 bp GACCCCTGGCCATGTTCCTCTCAGGCACCTACAGAAATCCCAGGAAGGGAAGGGCGGTCCAGGGGAATGTaGGCGGGATCCCAGGGGTCT +
Preference number: 4 (lower is better)
Translates to: DPWPCSSQAPTEIPGREGRSRGM*AGSQGS
Trigger: AGACCCCTGGGATCCCGCGCACATTCCCCTGGACCG...CCCTTCCCTTCCTGGGATTTCTGTAGGTGCCTGAGAGGAACATGGCCAGGGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR GCA 90 bp ACTCGTCCGGCAAACCTGCATGGCGTGAATTTACTCTGTCCGAGGGTGAGGAGGGGGGGAACAGAGGCCTaGGGCTCTGGCCACCCCAAC +
Preference number: 4 (lower is better)
Translates to: TRPANLHGVNLLCPRVRRGGTEA*GSGHPN
Trigger: GTTGGGGTGGCCAGAGCCGCAGGCCTCTGTTCCCCC...CCTCCTCACCCTCGGACAGAGTAAATTCACGCCATGCAGGTTTGCCGGACGAGT
62% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000640909.2
CDS-3UTR GCA 90 bp GCCCAAAGTTCGGGATGGTTTTGGGCAGGGGACAAGGAACATCCATCAGGGATCGCCCAGATGCGCGGCTaGCAGCGGCGCCAAAAGCCG +
Preference number: 4 (lower is better)
Translates to: AQSSGWFWAGDKEHPSGIAQMRG*QRRQKP
Trigger: CGGCTTTTGGCGCCGCTGGCAGCCGCGCATCTGGGC...GATCCCTGATGGATGTTCCTTGTCCCCTGCCCAAAACCATCCCGAACTTTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR GCA 90 bp CACCACTCAGCCCAGGCCCCTTTGCTTCAAATCGTGTCTCAGAGGGAGAACAGTGCCCAGATGCGCGGCTaGCAGCGGCGCCAAAAGCCG +
Preference number: 4 (lower is better)
Translates to: HHSAQAPLLQIVSQRENSAQMRG*QRRQKP
Trigger: CGGCTTTTGGCGCCGCTGGCAGCCGCGCATCTGGGC...ACTGTTCTCCCTCTGAGACACGATTTGAAGCAAAGGGGCCTGGGCTGAGTGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000639325.2
ENST00000640318.2
CDS-3UTR GCA 90 bp GGGTCTTGGGGAGACATCCGCTGGGTCACAAGCATGCCAAACGGGGAAGAAGGCCAGCACGTCCTTGGCTaGCTTGGAGGACAGGCCGCT +
Preference number: 4 (lower is better)
Translates to: GSWGDIRWVTSMPNGEEGQHVLG*LGGQAA
Trigger: AGCGGCCTGTCCTCCAAGGCAGCCAAGGACGTGCTG...GCCTTCTTCCCCGTTTGGCATGCTTGTGACCCAGCGGATGTCTCCCCAAGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265969.8
CDS-3UTR GCA 90 bp CGCAACTCCTCTTGGTGGCGGATAGCCGGGGTCTCACACGCCAGCTTTTGGAGGGGGGTCATTGGGCTGTaGCCCTATCCTCTCGGCGTA +
Preference number: 4 (lower is better)
Translates to: RNSSWWRIAGVSHASFWRGVIGL*PYPLGV
Trigger: TACGCCGAGAGGATAGGGGCACAGCCCAATGACCCC...CCTCCAAAAGCTGGCGTGTGAGACCCCGGCTATCCGCCACCAAGAGGAGTTGCG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR GCA 90 bp CGTCCTAGTACAATGCCTGGGCCACTCGGACTCGTCCGGCAAACCTGCATGGCGTTGGGAGATCCCAGCTaGGGTGGCCGCGGAATATGC +
Preference number: 4 (lower is better)
Translates to: RPSTMPGPLGLVRQTCMALGDPS*GGRGIC
Trigger: GCATATTCCGCGGCCACCGCAGCTGGGATCTCCCAA...CGCCATGCAGGTTTGCCGGACGAGTCCGAGTGGCCCAGGCATTGTACTAGGACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265969.8
ENST00000638366.1
ENST00000640909.2
CDS-3UTR GCA 90 bp TGTGAGGGCCCCAAATACTTCCTCAGCCACAGAGACTGTCCAAGCCAGAACTGTTGCTCGCCCGTCGCCTaGTCGTTCGCGCGGTCCGCG +
Preference number: 4 (lower is better)
Translates to: CEGPKYFLSHRDCPSQNCCSPVA*SFARSA
Trigger: CGCGGACCGCGCGAACGAGCAGGCGACGGGCGAGCA...ACAGTTCTGGCTTGGACAGTCTCTGTGGCTGAGGAAGTATTTGGGGCCCTCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR GCA 90 bp TCGGAGACCCCTGGCCATGTTCCTCTCAGGCACCTACAGAAATCCCAGGAAGGGACTGTTCACACCAGCTaGGGGCACCGGAGGGGCGCA +
Preference number: 4 (lower is better)
Translates to: SETPGHVPLRHLQKSQEGTVHTS*GHRRGA
Trigger: TGCGCCCCTCCGGTGCCCGCAGCTGGTGTGAACAGT...CCCTTCCTGGGATTTCTGTAGGTGCCTGAGAGGAACATGGCCAGGGGTCTCCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR GCA 90 bp CACCTCCAACTGGGAAAAAGCCAGTCGCAAAGGGGAACATCAGGCCCATCCATGCCCCCTCGGTGTGCCTaGCTGCCCCTCAGCGCCCTT +
Preference number: 4 (lower is better)
Translates to: HLQLGKSQSQRGTSGPSMPPRCA*LPLSAL
Trigger: AAGGGCGCTGAGGGGCAGGCAGGCACACCGAGGGGG...CATGGATGGGCCTGATGTTCCCCTTTGCGACTGGCTTTTTCCCAGTTGGAGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000638825.1
CDS-3UTR GCA 90 bp AATAGCCACCAGTGTCCTCGGCCAAGCCGCCTGGTCAAGTCACTCTCACAGCCTCGCCATGCAGCACCATaGGGGGAGTTGCGCACCGTG +
Preference number: 4 (lower is better)
Translates to: NSHQCPRPSRLVKSLSQPRHAAP*GELRTV
Trigger: CACGGTGCGCAACTCCCCGCATGGTGCTGCATGGCG...AGGCTGTGAGAGTGACTTGACCAGGCGGCTTGGCCGAGGACACTGGTGGCTATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638825.1
CDS-3UTR GCA 90 bp CCGGCAAACCTGCATGGCGTGAATTTACTCTGTCCGAGGGTGAGGAGGGGCTGCTGGACTCCCAGCCACTaGAGGGAGCAGCGCTGTTCC +
Preference number: 4 (lower is better)
Translates to: PANLHGVNLLCPRVRRGCWTPSH*REQRCS
Trigger: GGAACAGCGCTGCTCCCTGCAGTGGCTGGGAGTCCA...GCAGCCCCTCCTCACCCTCGGACAGAGTAAATTCACGCCATGCAGGTTTGCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638825.1
CDS-3UTR CCA 90 bp CACCACTCAGCCCAGGCCCCTTTGCTTCAAATCGTGTCTCAGAGGGAGAACAGTCTTCTCCCCGCCTCCTaGAGGAGATGGCGGGCCCCC +
Preference number: 4 (lower is better)
Translates to: HHSAQAPLLQIVSQRENSLLPAS*RRWRAP
Trigger: GGGGGCCCGCCATCTCCTCCAGGAGGCGGGGAGAAG...ACTGTTCTCCCTCTGAGACACGATTTGAAGCAAAGGGGCCTGGGCTGAGTGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000639325.2
ENST00000640318.2
CDS-3UTR CCA 90 bp GGCCGTAGAAAAAGCTACGTCCGTCCTAGTACAATGCCTGGGCCACTCGGACTCTCGGCGCGGGGGAGATaGATGCCGCCTGCCTTCCTC +
Preference number: 4 (lower is better)
Translates to: GRRKSYVRPSTMPGPLGLSARGR*MPPAFL
Trigger: GAGGAAGGCAGGCGGCATCCATCTCCCCCGCGCCGA...GAGTCCGAGTGGCCCAGGCATTGTACTAGGACGGACGTAGCTTTTTCTACGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000640909.2
CDS-3UTR CCA 90 bp TGTGAGGGCCCCAAATACTTCCTCAGCCACAGAGACTGTCCAAGCCAGAACTGTGCCCAGCGACACCCATaGGAGCGGCCGCCAGGGGGA +
Preference number: 4 (lower is better)
Translates to: CEGPKYFLSHRDCPSQNCAQRHP*ERPPGG
Trigger: TCCCCCTGGCGGCCGCTCCCATGGGTGTCGCTGGGC...ACAGTTCTGGCTTGGACAGTCTCTGTGGCTGAGGAAGTATTTGGGGCCCTCACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CCA 90 bp CACCACTCAGCCCAGGCCCCTTTGCTTCAAATCGTGTCTCAGAGGGAGAACAGTTCGCTCTCGTCCCCTTaGCCCATCGCGGCGCCCCCT +
Preference number: 4 (lower is better)
Translates to: HHSAQAPLLQIVSQRENSSLSSP*PIAAPP
Trigger: AGGGGGCGCCGCGATGGGCCAAGGGGACGAGAGCGA...ACTGTTCTCCCTCTGAGACACGATTTGAAGCAAAGGGGCCTGGGCTGAGTGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000639325.2
ENST00000640318.2
CDS-3UTR CCA 90 bp TCTGCAAGAGCAGCCTGGGGGAGTCAAGGCTCCTCCTGCATTCCTGGGTACCCCTCGGGAGTGAGGGCCTaGTCTATGTGGGGGCAGTCT +
Preference number: 4 (lower is better)
Translates to: SARAAWGSQGSSCIPGYPSGVRA*SMWGQS
Trigger: AGACTGCCCCCACATAGACCAGGCCCTCACTCCCGA...GGGGTACCCAGGAATGCAGGAGGAGCCTTGACTCCCCCAGGCTGCTCTTGCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000638825.1
ENST00000675775.1
CDS-3UTR CCA 90 bp GGGTCTTGGGGAGACATCCGCTGGGTCACAAGCATGCCAAACGGGGAAGAAGGCCATTCCTCCACCAGGTaGGCACGCGTACTCCCCGGT +
Preference number: 4 (lower is better)
Translates to: GSWGDIRWVTSMPNGEEGHSSTR*ARVLPG
Trigger: ACCGGGGAGTACGCGTGCCCACCTGGTGGAGGAATG...GCCTTCTTCCCCGTTTGGCATGCTTGTGACCCAGCGGATGTCTCCCCAAGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000638825.1
CDS-3UTR CCA 90 bp CCCAGGGGCACCAGTGAGGTTCCTCTAGCAGGCTCTTGCCTGCTGAATTTGGCCGGGGAGAACCCTCGGTaGGAGGCTGTTGCTGGTCTG +
Preference number: 4 (lower is better)
Translates to: PRGTSEVPLAGSCLLNLAGENPR*EAVAGL
Trigger: CAGACCAGCAACAGCCTCCCACCGAGGGTTCTCCCC...GGCCAAATTCAGCAGGCAAGAGCCTGCTAGAGGAACCTCACTGGTGCCCCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CCA 90 bp CAGGCACCGCCAAAGTACTTACTGTTCACACCAGCTGCGGGCACCGGAGGGGCGCGGGAAGTGAGTGCTTaGGAAGGGCTTGGGAGCACA +
Preference number: 4 (lower is better)
Translates to: QAPPKYLLFTPAAGTGGAREVSA*EGLGST
Trigger: TGTGCTCCCAAGCCCTTCCCAAGCACTCACTTCCCG...CGCCCCTCCGGTGCCCGCAGCTGGTGTGAACAGTAAGTACTTTGGCGGTGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CCA 90 bp CGCAACTCCTCTTGGTGGCGGATAGCCGGGGTCTCACACGCCAGCTTTTGGAGGCTGCCTCTGTGGAGATaGTGCCGCCTGAGACCCTTC +
Preference number: 4 (lower is better)
Translates to: RNSSWWRIAGVSHASFWRLPLWR*CRLRPF
Trigger: GAAGGGTCTCAGGCGGCACCATCTCCACAGAGGCAG...CCTCCAAAAGCTGGCGTGTGAGACCCCGGCTATCCGCCACCAAGAGGAGTTGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CCA 90 bp AGTCCTCGGCGGCTGTCGTGGCTCCATGAGAGCGCGGGCCGAATGGATGTAGGTGGCTCAAAGGACCTCTaGGCAGGGCAGAGAAGCAGA +
Preference number: 4 (lower is better)
Translates to: SPRRLSWLHESAGRMDVGGSKDL*AGQRSR
Trigger: TCTGCTTCTCTGCCCTGCCCAGAGGTCCTTTGAGCC...ACCTACATCCATTCGGCCCGCGCTCTCATGGAGCCACGACAGCCGCCGAGGACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638825.1
CDS-3UTR CCA 90 bp CAATGCCTGGGCCACTCGGACTCGTCCGGCAAACCTGCATGGCGTGAATTTACTGACCCTCCCGAAGGCTaGCAGCCCTCCGCCATGCAG +
Preference number: 4 (lower is better)
Translates to: QCLGHSDSSGKPAWREFTDPPEG*QPSAMQ
Trigger: CTGCATGGCGGAGGGCTGCCAGCCTTCGGGAGGGTC...AGTAAATTCACGCCATGCAGGTTTGCCGGACGAGTCCGAGTGGCCCAGGCATTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638825.1
CDS-3UTR CCA 90 bp CGTAGAAAAAGCTACGTCCGTCCTAGTACAATGCCTGGGCCACTCGGACTCGTCCCTCGGCGGCTGTCGTaGCTCCATGAGAGCGCGGGC +
Preference number: 4 (lower is better)
Translates to: RRKSYVRPSTMPGPLGLVPRRLS*LHESAG
Trigger: GCCCGCGCTCTCATGGAGCCACGACAGCCGCCGAGG...GACGAGTCCGAGTGGCCCAGGCATTGTACTAGGACGGACGTAGCTTTTTCTACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638825.1
3UTR CAA 72 bp TCTAAGCTGCCCAGGGTGGTGGCCCCCTCTAGTCTTTaGCTCGGCAGCCGCTTCCATCGGGTCACCGGAAAC +
Preference number: 4 (lower is better)
Translates to: SKLPRVVAPSSL*LGSRFHRVTGN
Trigger: GTTTCCGGTGACCCGATGGAAGCGGCTGCCGAGCAAAAGACTAGAGGGGGCCACCACCCTGGGCAGCTTAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR CAA 72 bp CCAGGCAGCGTCTCCTTCTGGGAGGGGAGTGAGGACTaGCTGAGTCTCTGTTGGCCATCCTCTGCCAGGGGA +
Preference number: 4 (lower is better)
Translates to: PGSVSFWEGSED*LSLCWPSSARG
Trigger: TCCCCTGGCAGAGGATGGCCAACAGAGACTCAGCAAGTCCTCACTCCCCTCCCAGAAGGAGACGCTGCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR TCA 90 bp TCTGCAAGAGCAGCCTGGGGGAGTCAAGGCTCCTCCTGCATTCCTGGGTACCCCTGTTCACGATGGGGTTaGAGCGCTCGTGGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: SARAAWGSQGSSCIPGYPCSRWG*SARGSP
Trigger: TGGAGACCCACGAGCGCTTCAACCCCATCGTGAACA...GGGGTACCCAGGAATGCAGGAGGAGCCTTGACTCCCCCAGGCTGCTCTTGCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000675775.1
CDS-3UTR TCA 90 bp ACTCGGACTCGTCCGGCAAACCTGCATGGCGTGAATTTACTCTGTCCGAGGGTGGGCCCTCATCGGGAGTaGGGGCCTGGTCTATGTGGG +
Preference number: 4 (lower is better)
Translates to: TRTRPANLHGVNLLCPRVGPHRE*GPGLCG
Trigger: CCCACATAGACCAGGCCCTCACTCCCGATGAGGGCC...CACCCTCGGACAGAGTAAATTCACGCCATGCAGGTTTGCCGGACGAGTCCGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265969.8
ENST00000638366.1
ENST00000638825.1
ENST00000640909.2
CDS-3UTR TCA 90 bp TCGGACTCGTCCGGCAAACCTGCATGGCGTGAATTTACTCTGTCCGAGGGTGAGGGCCCTCATCGGGAGTaGGGGCCTGGTCTATGTGGG +
Preference number: 4 (lower is better)
Translates to: SDSSGKPAWREFTLSEGEGPHRE*GPGLCG
Trigger: CCCACATAGACCAGGCCCTCACTCCCGATGAGGGCC...CTCACCCTCGGACAGAGTAAATTCACGCCATGCAGGTTTGCCGGACGAGTCCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265969.8
ENST00000638366.1
ENST00000638825.1
ENST00000640909.2
CDS-3UTR TCA 90 bp GTACAATGCCTGGGCCACTCGGACTCGTCCGGCAAACCTGCATGGCGTGAATTTGGCCCTCATCGGGAGTaGGGGCCTGGTCTATGTGGG +
Preference number: 4 (lower is better)
Translates to: VQCLGHSDSSGKPAWREFGPHRE*GPGLCG
Trigger: CCCACATAGACCAGGCCCTCACTCCCGATGAGGGCC...AAATTCACGCCATGCAGGTTTGCCGGACGAGTCCGAGTGGCCCAGGCATTGTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265969.8
ENST00000638366.1
ENST00000638825.1
ENST00000640909.2
CDS-3UTR TCA 90 bp CCCAGGGGCACCAGTGAGGTTCCTCTAGCAGGCTCTTGCCTGCTGAATTTGGCCACCGGGTCAGTAGCCTaGGTCAGAGACTCACACCGG +
Preference number: 4 (lower is better)
Translates to: PRGTSEVPLAGSCLLNLATGSVA*VRDSHR
Trigger: CCGGTGTGAGTCTCTGACTCAGGCTACTGACCCGGT...GGCCAAATTCAGCAGGCAAGAGCCTGCTAGAGGAACCTCACTGGTGCCCCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR TCA 90 bp AGCCACAGCACACAGGAGGAGACCAGATTGTCCCTGGGACAGACACACAGACTGAGGCTCTGCCGGGGGTaGGAACCCTTGCACCTGCCT +
Preference number: 4 (lower is better)
Translates to: SHSTQEETRLSLGQTHRLRLCRG*EPLHLP
Trigger: AGGCAGGTGCAAGGGTTCTCACCCCCGGCAGAGCCT...CAGTCTGTGTGTCTGTCCCAGGGACAATCTGGTCTCCTCCTGTGTGCTGTGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR TCA 90 bp CGCAACTCCTCTTGGTGGCGGATAGCCGGGGTCTCACACGCCAGCTTTTGGAGGAACACCACCGGGAAGTaGGTGCTTGGGAAGGGCTTG +
Preference number: 4 (lower is better)
Translates to: RNSSWWRIAGVSHASFWRNTTGK*VLGKGL
Trigger: CAAGCCCTTCCCAAGCACTCACTTCCCGGTGGTGTT...CCTCCAAAAGCTGGCGTGTGAGACCCCGGCTATCCGCCACCAAGAGGAGTTGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR TCA 90 bp GTGAGGGCCCCAAATACTTCCTCAGCCACAGAGACTGTCCAAGCCAGAACTGTCCCACCCACTGCTCACTaGCGTGGGACCCTGCAGCCC +
Preference number: 4 (lower is better)
Translates to: VRAPNTSSATETVQARTVPPTAH*RGTLQP
Trigger: GGGCTGCAGGGTCCCACGTCAGTGAGCAGTGGGTGG...GACAGTTCTGGCTTGGACAGTCTCTGTGGCTGAGGAAGTATTTGGGGCCCTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR TCA 90 bp CGCAACTCCTCTTGGTGGCGGATAGCCGGGGTCTCACACGCCAGCTTTTGGAGGAGGCGGGGGCTTCTCTaGGACCTCACTGCTGTTCTA +
Preference number: 4 (lower is better)
Translates to: RNSSWWRIAGVSHASFWRRRGLL*DLTAVL
Trigger: TAGAACAGCAGTGAGGTCTCAGAGAAGCCCCCGCCT...CCTCCAAAAGCTGGCGTGTGAGACCCCGGCTATCCGCCACCAAGAGGAGTTGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR TCA 90 bp CAATGCCTGGGCCACTCGGACTCGTCCGGCAAACCTGCATGGCGTGAATTTACTCTCCCCGGCCGGTGCTaGAGCTCTAGGAGAAGCCTC +
Preference number: 4 (lower is better)
Translates to: QCLGHSDSSGKPAWREFTLPGRC*SSRRSL
Trigger: GAGGCTTCTCCTAGAGCTTCAGCACCGGCCGGGGAG...AGTAAATTCACGCCATGCAGGTTTGCCGGACGAGTCCGAGTGGCCCAGGCATTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638825.1
CDS-3UTR TCA 90 bp CGTCCTAGTACAATGCCTGGGCCACTCGGACTCGTCCGGCAAACCTGCATGGCGCCTGGGGGAATGGGATaGGTCCCTACTTCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: RPSTMPGPLGLVRQTCMAPGGMG*VPTSAL
Trigger: CAGAGCAGAAGTAGGGACTCATCCCATTCCCCCAGG...CGCCATGCAGGTTTGCCGGACGAGTCCGAGTGGCCCAGGCATTGTACTAGGACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638825.1
CDS-3UTR GCA 90 bp AAAAGCTACGTCCGTCCTAGTACAATGCCTGGGCCACTCGGACTCGTCCGGCAATGGCTGGGTTTGATTTaGGGGGCCGGCGGGCACTGG +
Preference number: 4 (lower is better)
Translates to: KSYVRPSTMPGPLGLVRQWLGLI*GAGGHW
Trigger: CCAGTGCCCGCCGGCCCCGCAAATCAAACCCAGCCA...TTGCCGGACGAGTCCGAGTGGCCCAGGCATTGTACTAGGACGGACGTAGCTTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000640909.2
CDS-3UTR GCA 90 bp CACCACTCAGCCCAGGCCCCTTTGCTTCAAATCGTGTCTCAGAGGGAGAACAGTCGCGGGGGAGATGGATaGCGCCTGCCTTCCTCCCTG +
Preference number: 4 (lower is better)
Translates to: HHSAQAPLLQIVSQRENSRGGDG*RLPSSL
Trigger: CAGGGAGGAAGGCAGGCGGCATCCATCTCCCCCGCG...ACTGTTCTCCCTCTGAGACACGATTTGAAGCAAAGGGGCCTGGGCTGAGTGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000639325.2
ENST00000640318.2
CDS-3UTR GCA 90 bp CAATGCCTGGGCCACTCGGACTCGTCCGGCAAACCTGCATGGCGTGAATTTACTGGGCGCTTTGTCGGGTaGCGGTCCAGGGGAATGTGC +
Preference number: 4 (lower is better)
Translates to: QCLGHSDSSGKPAWREFTGRFVG*RSRGMC
Trigger: GCACATTCCCCTGGACCGGCACCCGACAAAGCGCCC...AGTAAATTCACGCCATGCAGGTTTGCCGGACGAGTCCGAGTGGCCCAGGCATTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000640909.2
CDS-3UTR GCA 90 bp GGGAGAGACTGTGGAGCTCAGGGGCAATCCCACAGGAGTGCATGGGTTTTACAGGGGCGCTTTGTCGGGTaGCGGTCCAGGGGAATGTGC +
Preference number: 4 (lower is better)
Translates to: GRDCGAQGQSHRSAWVLQGRFVG*RSRGMC
Trigger: GCACATTCCCCTGGACCGGCACCCGACAAAGCGCCC...CTGTAAAACCCATGCACTCCTGTGGGATTGCCCCTGAGCTCCACAGTCTCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR GCA 90 bp ACTCGTCCGGCAAACCTGCATGGCGTGAATTTACTCTGTCCGAGGGTGAGGAGGGGGCGCTTTGTCGGGTaGCGGTCCAGGGGAATGTGC +
Preference number: 4 (lower is better)
Translates to: TRPANLHGVNLLCPRVRRGRFVG*RSRGMC
Trigger: GCACATTCCCCTGGACCGGCACCCGACAAAGCGCCC...CCTCCTCACCCTCGGACAGAGTAAATTCACGCCATGCAGGTTTGCCGGACGAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000640909.2
CDS-3UTR GCA 90 bp CACCACTCAGCCCAGGCCCCTTTGCTTCAAATCGTGTCTCAGAGGGAGAACAGTGGGGGAACAGAGGCCTaGGGCTCTGGCCACCCCAAC +
Preference number: 4 (lower is better)
Translates to: HHSAQAPLLQIVSQRENSGGTEA*GSGHPN
Trigger: GTTGGGGTGGCCAGAGCCGCAGGCCTCTGTTCCCCC...ACTGTTCTCCCTCTGAGACACGATTTGAAGCAAAGGGGCCTGGGCTGAGTGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000639325.2
ENST00000640318.2
CDS-3UTR GCA 90 bp CTGGCGTCACTTCATTTCTCCGCTACTTCCCCCACAGCCCACCTGAGGACAACAGGCAATCCCTGGCTGTaGCAGGGCGCCCTCCTAGCA +
Preference number: 4 (lower is better)
Translates to: LASLHFSATSPTAHLRTTGNPWL*QGALLA
Trigger: TGCTAGGAGGGCGCCCTGGCACAGCCAGGGATTGCC...TGTTGTCCTCAGGTGGGCTGTGGGGGAAGTAGCGGAGAAATGAAGTGACGCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR GCA 90 bp CAAGGACAATGGCCTTACCCCCAAGCCCTGAAGACATCTCTCTCTTCTTGCCTCCCCCCTCGGTGTGCCTaGCTGCCCCTCAGCGCCCTT +
Preference number: 4 (lower is better)
Translates to: QGQWPYPQALKTSLSSCLPPRCA*LPLSAL
Trigger: AAGGGCGCTGAGGGGCAGGCAGGCACACCGAGGGGG...GAGGCAAGAAGAGAGAGATGTCTTCAGGGCTTGGGGGTAAGGCCATTGTCCTTG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000638825.1
ENST00000675775.1
CDS-3UTR GCA 90 bp GGACTTGACCTGCCATCTGCAAGAGCAGCCTGGGGGAGTCAAGGCTCCTCCTGCCCAGCAACCCACAGCTaGCAGGGCCTCAAGTTCTCT +
Preference number: 4 (lower is better)
Translates to: GLDLPSARAAWGSQGSSCPATHS*QGLKFS
Trigger: AGAGAACTTGAGGCCCTGGCAGCTGTGGGTTGCTGG...GCAGGAGGAGCCTTGACTCCCCCAGGCTGCTCTTGCAGATGGCAGGTCAAGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000638825.1
ENST00000675775.1
CDS-3UTR CCA 90 bp CACGGGAAAGTGGTTGTACACTGGTTGGGATGTCTATATTGCTGCTGCAGTCCCGGCTGCGCTCGGACTTaGGCTCCCGCGGCGGTGCTG +
Preference number: 4 (lower is better)
Translates to: HGKVVVHWLGCLYCCCSPGCART*APAAVL
Trigger: CAGCACCGCCGCGGGAGCCCAAGTCCGAGCGCAGCC...GGGACTGCAGCAGCAATATAGACATCCCAACCAGTGTACAACCACTTTCCCGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CCA 90 bp TGGGGAAACTATGGCAGAGAGGGTAACTTGCTCAAGGAGGAGAACCTTGTCCTGGGCTGCGCTCGGACTTaGGCTCCCGCGGCGGTGCTG +
Preference number: 4 (lower is better)
Translates to: WGNYGREGNLLKEENLVLGCART*APAAVL
Trigger: CAGCACCGCCGCGGGAGCCCAAGTCCGAGCGCAGCC...CAGGACAAGGTTCTCCTCCTTGAGCAAGTTACCCTCTCTGCCATAGTTTCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000639325.2
ENST00000640318.2
CDS-3UTR CCA 90 bp TCTCTGCCATCTACACAGCCTGAAGGGAGCCATGGTAAGGACCAGATCAAAGGCGCCTTCCTCCCTGCGTaGCCGGGCTGCAGCTCGGGA +
Preference number: 4 (lower is better)
Translates to: SLPSTQPEGSHGKDQIKGAFLPA*PGCSSG
Trigger: TCCCGAGCTGCAGCCCGGCCACGCAGGGAGGAAGGC...GCCTTTGATCTGGTCCTTACCATGGCTCCCTTCAGGCTGTGTAGATGGCAGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CCA 90 bp CCGGCAAACCTGCATGGCGTGAATTTACTCTGTCCGAGGGTGAGGAGGGGCTGCGGGTTGAAGCGCTCGTaGGTCTCCAGGCAGAAGGTG +
Preference number: 4 (lower is better)
Translates to: PANLHGVNLLCPRVRRGCGLKRS*VSRQKV
Trigger: CACCTTCTGCCTGGAGACCCACGAGCGCTTCAACCC...GCAGCCCCTCCTCACCCTCGGACAGAGTAAATTCACGCCATGCAGGTTTGCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000640909.2
CDS-3UTR CCA 90 bp GCCTGGGCCACTCGGACTCGTCCGGCAAACCTGCATGGCGTGAATTTACTCTGTTGTGCTCACTGGCGCTaGGGTCATTGGGCTGTGCCC +
Preference number: 4 (lower is better)
Translates to: AWATRTRPANLHGVNLLCCAHWR*GHWAVP
Trigger: GGGCACAGCCCAATGACCCCAGCGCCAGTGAGCACA...ACAGAGTAAATTCACGCCATGCAGGTTTGCCGGACGAGTCCGAGTGGCCCAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000640909.2
CDS-3UTR CCA 90 bp CAGAGGACCTGCCCAGGCAGACTAAGAAAGCAGATCTCCCACCACTCAGCCCAGTGTGCTCACTGGCGCTaGGGTCATTGGGCTGTGCCC +
Preference number: 4 (lower is better)
Translates to: QRTCPGRLRKQISHHSAQCAHWR*GHWAVP
Trigger: GGGCACAGCCCAATGACCCCAGCGCCAGTGAGCACA...CTGGGCTGAGTGGTGGGAGATCTGCTTTCTTAGTCTGCCTGGGCAGGTCCTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS-3UTR CCA 90 bp CTCGCGGGTGCCCGAGCGCGTAAAGGGCAGGCCCTCATCGGGAGTGAGGGCCTGCAGATTTACAATAATTaGGAGATCCCAGCTGCGGTG +
Preference number: 4 (lower is better)
Translates to: LAGARARKGQALIGSEGLQIYNN*EIPAAV
Trigger: CACCGCAGCTGGGATCTCCCAATTATTGTAAATCTG...CAGGCCCTCACTCCCGATGAGGGCCTGCCCTTTACGCGCTCGGGCACCCGCGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638366.1
CDS-3UTR CCA 90 bp GCGGGTGCCCGAGCGCGTAAAGGGCAGGCCCTCATCGGGAGTGAGGGCCTGGTCTCTAAAATTTCTTCCTaGGCCAGCGGACATGTGTCA +
Preference number: 4 (lower is better)
Translates to: AGARARKGQALIGSEGLVSKISS*ASGHVS
Trigger: TGACACATGTCCGCTGGCCCAGGAAGAAATTTTAGA...GACCAGGCCCTCACTCCCGATGAGGGCCTGCCCTTTACGCGCTCGGGCACCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638366.1
CDS-3UTR CCA 90 bp GCTACGTCCGTCCTAGTACAATGCCTGGGCCACTCGGACTCGTCCGGCAAACCTTCGGGAGTGAGGGCCTaGTCTATGTGGGGGCAGTCT +
Preference number: 4 (lower is better)
Translates to: ATSVLVQCLGHSDSSGKPSGVRA*SMWGQS
Trigger: AGACTGCCCCCACATAGACCAGGCCCTCACTCCCGA...AGGTTTGCCGGACGAGTCCGAGTGGCCCAGGCATTGTACTAGGACGGACGTAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265969.8
ENST00000638366.1
ENST00000638825.1
ENST00000640909.2
CDS-3UTR CCA 90 bp CTGCATGGCGTGAATTTACTCTGTCCGAGGGTGAGGAGGGGCTGCAGGTCCACCTCGGGAGTGAGGGCCTaGTCTATGTGGGGGCAGTCT +
Preference number: 4 (lower is better)
Translates to: LHGVNLLCPRVRRGCRSTSGVRA*SMWGQS
Trigger: AGACTGCCCCCACATAGACCAGGCCCTCACTCCCGA...GGTGGACCTGCAGCCCCTCCTCACCCTCGGACAGAGTAAATTCACGCCATGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265969.8
ENST00000638366.1
ENST00000638825.1
ENST00000640909.2
CDS-3UTR CCA 90 bp GAAAAAGCTACGTCCGTCCTAGTACAATGCCTGGGCCACTCGGACTCGTCCGGCCATTCCTCCACCAGGTaGGCACGCGTACTCCCCGGT +
Preference number: 4 (lower is better)
Translates to: EKATSVLVQCLGHSDSSGHSSTR*ARVLPG
Trigger: ACCGGGGAGTACGCGTGCCCACCTGGTGGAGGAATG...GCCGGACGAGTCCGAGTGGCCCAGGCATTGTACTAGGACGGACGTAGCTTTTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265969.8
ENST00000638366.1
ENST00000638825.1
ENST00000640909.2
CDS-3UTR CCA 90 bp GGCGTGAATTTACTCTGTCCGAGGGTGAGGAGGGGCTGCAGGTCCACCCAGATGCTCGGCCAAGCCGCCTaGTCAAGTCACTCTCACAGC +
Preference number: 4 (lower is better)
Translates to: GVNLLCPRVRRGCRSTQMLGQAA*SSHSHS
Trigger: GCTGTGAGAGTGACTTGACCAGGCGGCTTGGCCGAG...CATCTGGGTGGACCTGCAGCCCCTCCTCACCCTCGGACAGAGTAAATTCACGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265969.8
ENST00000638366.1
ENST00000638825.1
ENST00000640909.2
CDS-3UTR CCA 90 bp CCGGCAAACCTGCATGGCGTGAATTTACTCTGTCCGAGGGTGAGGAGGGGCTGCTGCTGTCAGGGGTCTTaGGGAGACATCCGCTGGGTC +
Preference number: 4 (lower is better)
Translates to: PANLHGVNLLCPRVRRGCCCQGS*GDIRWV
Trigger: GACCCAGCGGATGTCTCCCCAAGACCCCTGACAGCA...GCAGCCCCTCCTCACCCTCGGACAGAGTAAATTCACGCCATGCAGGTTTGCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000638825.1
CDS-3UTR CCA 90 bp GCCCAGGCGGGGGCTTCTCTGAGACCTCACTGCTGTTCTAGGTGCCATGGGCAGAGAAGAGGATTGGGATaGGGTGGTGGGTCAGAGAGC +
Preference number: 4 (lower is better)
Translates to: AQAGASLRPHCCSRCHGQRRGLG*GGGSES
Trigger: GCTCTCTGACCCACCACCCCATCCCAATCCTCTTCT...CTGCCCATGGCACCTAGAACAGCAGTGAGGTCTCAGAGAAGCCCCCGCCTGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CCA 90 bp CTGGCGTCACTTCATTTCTCCGCTACTTCCCCCACAGCCCACCTGAGGACAACAATGGAAGCTGGGGCCTaGGCCAGCCCACGCGTTCCT +
Preference number: 4 (lower is better)
Translates to: LASLHFSATSPTAHLRTTMEAGA*ASPRVP
Trigger: AGGAACGCGTGGGCTGGCCCAGGCCCCAGCTTCCAT...TGTTGTCCTCAGGTGGGCTGTGGGGGAAGTAGCGGAGAAATGAAGTGACGCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CCA 90 bp AAGCAGAGAGCTCGGAGCTGTTTCAGCCTCGGAGACCCCTGGCCATGTTCCTCTCCAGAGTGGGCGGTCTaGGCATCCGACTGCAGATGC +
Preference number: 4 (lower is better)
Translates to: KQRARSCFSLGDPWPCSSPEWAV*ASDCRC
Trigger: GCATCTGCAGTCGGATGCCCAGACCGCCCACTCTGG...AGAGGAACATGGCCAGGGGTCTCCGAGGCTGAAACAGCTCCGAGCTCTCTGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CCA 90 bp CCTGGCGGGCCGCGTTGTCTCTTCAGAACATCACGAGACCAACCGCGTCAACCTCCCATGCCTGGCCCCTaGCGTCACTTCATTTCTCCG +
Preference number: 4 (lower is better)
Translates to: PGGPRCLFRTSRDQPRQPPMPGP*RHFISP
Trigger: CGGAGAAATGAAGTGACGCCAGGGGCCAGGCATGGG...AGGTTGACGCGGTTGGTCTCGTGATGTTCTGAAGAGACAACGCGGCCCGCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CCA 90 bp CAGGCACCGCCAAAGTACTTACTGTTCACACCAGCTGCGGGCACCGGAGGGGCGCCTGCAGTGATGAAATaGCAGCATGGGCAGCGTCTC +
Preference number: 4 (lower is better)
Translates to: QAPPKYLLFTPAAGTGGAPAVMK*QHGQRL
Trigger: GAGACGCTGCCCATGCTGCCATTTCATCACTGCAGG...CGCCCCTCCGGTGCCCGCAGCTGGTGTGAACAGTAAGTACTTTGGCGGTGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CCA 90 bp CCCAGGGGCACCAGTGAGGTTCCTCTAGCAGGCTCTTGCCTGCTGAATTTGGCCAGGGGCCCAGGCCCCTaGGCTGTTCGTCTATCTATG +
Preference number: 4 (lower is better)
Translates to: PRGTSEVPLAGSCLLNLARGPGP*AVRLSM
Trigger: CATAGATAGACGAACAGCCCAGGGGCCTGGGCCCCT...GGCCAAATTCAGCAGGCAAGAGCCTGCTAGAGGAACCTCACTGGTGCCCCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CCA 90 bp CCACAGCTGCCAGGGCCTCAAGTTCTCTCTGCCAGCCTGACATCTCACTTGGGGAAGTTCACAGGGTCCTaGCCCACTCCACTGCCCTCC +
Preference number: 4 (lower is better)
Translates to: PQLPGPQVLSASLTSHLGKFTGS*PTPLPS
Trigger: GGAGGGCAGTGGAGTGGGCCAGGACCCTGTGAACTT...CCCCAAGTGAGATGTCAGGCTGGCAGAGAGAACTTGAGGCCCTGGCAGCTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638825.1
ENST00000675775.1
3UTR CAA 72 bp TCATTCCTCCACCAGGTGGGCACGCGTACTCCCCGGTaGATAAGAGGAAGCAGGGTCCGTATCTCTCGCGGG +
Preference number: 4 (lower is better)
Translates to: SFLHQVGTRTPR*IRGSRVRISRG
Trigger: CCCGCGAGAGATACGGACCCTGCTTCCTCTTATCAACCGGGGAGTACGCGTGCCCACCTGGTGGAGGAATGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638366.1
CDS-3UTR TCA 90 bp AGACTAAATGCCACCTGTCACGTCAACCTCCTGCTCACCTGGCACTCCTTCTTAATTCGCGCTCCTCTGTaGGGTGGTCGCCGCGGCGCG +
Preference number: 4 (lower is better)
Translates to: RLNATCHVNLLLTWHSFLIRAPL*GGRRGA
Trigger: CGCGCCGCGGCGACCACCTCACAGAGGAGCGCGAAT...TAAGAAGGAGTGCCAGGTGAGCAGGAGGTTGACGTGACAGGTGGCATTTAGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR TCA 90 bp CAAGAGCAGCCTGGGGGAGTCAAGGCTCCTCCTGCATTCCTGGGTACCCCTGCCGGACATGTGTCACTCTaGGTACTGTGGTGTGGAGAG +
Preference number: 4 (lower is better)
Translates to: QEQPGGVKAPPAFLGTPAGHVSL*VLWCGE
Trigger: CTCTCCACACCACAGTACTCAGAGTGACACATGTCC...GGCAGGGGTACCCAGGAATGCAGGAGGAGCCTTGACTCCCCCAGGCTGCTCTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675775.1
CDS-3UTR TCA 90 bp CAATGCCTGGGCCACTCGGACTCGTCCGGCAAACCTGCATGGCGTGAATTTACTTACTCTGTCCGAGGGTaGGGAGGGGCTGCAGGTCCA +
Preference number: 4 (lower is better)
Translates to: QCLGHSDSSGKPAWREFTYSVRG*GGAAGP
Trigger: TGGACCTGCAGCCCCTCCTCACCCTCGGACAGAGTA...AGTAAATTCACGCCATGCAGGTTTGCCGGACGAGTCCGAGTGGCCCAGGCATTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265969.8
ENST00000638366.1
ENST00000638825.1
ENST00000640909.2
CDS-3UTR TCA 90 bp AGAAAAAGCTACGTCCGTCCTAGTACAATGCCTGGGCCACTCGGACTCGTCCGGTACTCTGTCCGAGGGTaGGGAGGGGCTGCAGGTCCA +
Preference number: 4 (lower is better)
Translates to: RKSYVRPSTMPGPLGLVRYSVRG*GGAAGP
Trigger: TGGACCTGCAGCCCCTCCTCACCCTCGGACAGAGTA...CCGGACGAGTCCGAGTGGCCCAGGCATTGTACTAGGACGGACGTAGCTTTTTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265969.8
ENST00000638366.1
ENST00000638825.1
ENST00000640909.2
CDS-3UTR TCA 90 bp GTGAATTTACTCTGTCCGAGGGTGAGGAGGGGCTGCAGGTCCACCCAGATGCTTTACTCTGTCCGAGGGTaGGGAGGGGCTGCAGGTCCA +
Preference number: 4 (lower is better)
Translates to: VNLLCPRVRRGCRSTQMLYSVRG*GGAAGP
Trigger: TGGACCTGCAGCCCCTCCTCACCCTCGGACAGAGTA...AAGCATCTGGGTGGACCTGCAGCCCCTCCTCACCCTCGGACAGAGTAAATTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265969.8
ENST00000638366.1
ENST00000638825.1
ENST00000640909.2
CDS-3UTR TCA 90 bp CAGATCAAAGGCTGTCTAGCGTTTCCAAATCACACCCGCCCCCACTCTGTCCCATTCCCCACCTGGGGCTaGGCTAGCCAGCAGCCTCCT +
Preference number: 4 (lower is better)
Translates to: QIKGCLAFPNHTRPHSVPFPTWG*ASQQPP
Trigger: AGGAGGCTGCTGGCTAGCTCAGCCCCAGGTGGGGAA...TGGGACAGAGTGGGGGCGGGTGTGATTTGGAAACGCTAGACAGCCTTTGATCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR TCA 90 bp GGACTTGACCTGCCATCTGCAAGAGCAGCCTGGGGGAGTCAAGGCTCCTCCTGCAAGCCTCGGTGGGACTaGGGAATGGGTATCTCCTGT +
Preference number: 4 (lower is better)
Translates to: GLDLPSARAAWGSQGSSCKPRWD*GMGISC
Trigger: ACAGGAGATACCCATTCCTCAGTCCCACCGAGGCTT...GCAGGAGGAGCCTTGACTCCCCCAGGCTGCTCTTGCAGATGGCAGGTCAAGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638825.1
CDS-3UTR GCA 90 bp ACTAAGAAAGCAGATCTCCCACCACTCAGCCCAGGCCCCTTTGCTTCAAATCGTGCCCAGATGCGCGGCTaGCAGCGGCGCCAAAAGCCG +
Preference number: 4 (lower is better)
Translates to: TKKADLPPLSPGPFASNRAQMRG*QRRQKP
Trigger: CGGCTTTTGGCGCCGCTGGCAGCCGCGCATCTGGGC...ACGATTTGAAGCAAAGGGGCCTGGGCTGAGTGGTGGGAGATCTGCTTTCTTAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000639325.2
ENST00000640318.2
CDS-3UTR GCA 90 bp CAAGAGCAGCCTGGGGGAGTCAAGGCTCCTCCTGCATTCCTGGGTACCCCTGCCAGTAGCGCACTTGCGTaGCATTGCGAACGTTCTCGA +
Preference number: 4 (lower is better)
Translates to: QEQPGGVKAPPAFLGTPASSALA*HCERSR
Trigger: TCGAGAACGTTCGCAATGGCACGCAAGTGCGCTACT...GGCAGGGGTACCCAGGAATGCAGGAGGAGCCTTGACTCCCCCAGGCTGCTCTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675775.1
CDS-3UTR GCA 90 bp AGCCCGAAATCAGGGCAGGAATTCTACTCAGCTATGGAGACAGGCTCTGCCGGGCAGCACGTCCTTGGCTaGCTTGGAGGACAGGCCGCT +
Preference number: 4 (lower is better)
Translates to: SPKSGQEFYSAMETGSAGQHVLG*LGGQAA
Trigger: AGCGGCCTGTCCTCCAAGGCAGCCAAGGACGTGCTG...CCCGGCAGAGCCTGTCTCCATAGCTGAGTAGAATTCCTGCCCTGATTTCGGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR GCA 90 bp GCCCAGGCGGGGGCTTCTCTGAGACCTCACTGCTGTTCTAGGTGCCATGGGCAGTTCTTAAAGTGCGTGTaGTCACTGGCGCTGGGGTCA +
Preference number: 4 (lower is better)
Translates to: AQAGASLRPHCCSRCHGQFLKCV*SLALGS
Trigger: TGACCCCAGCGCCAGTGAGCACACGCACTTTAAGAA...CTGCCCATGGCACCTAGAACAGCAGTGAGGTCTCAGAGAAGCCCCCGCCTGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR GCA 90 bp CAGGCACCGCCAAAGTACTTACTGTTCACACCAGCTGCGGGCACCGGAGGGGCGGGGATGTTCTTAAAGTaGGTGTGCTCACTGGCGCTG +
Preference number: 4 (lower is better)
Translates to: QAPPKYLLFTPAAGTGGAGMFLK*VCSLAL
Trigger: CAGCGCCAGTGAGCACACGCACTTTAAGAACATCCC...CGCCCCTCCGGTGCCCGCAGCTGGTGTGAACAGTAAGTACTTTGGCGGTGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR GCA 90 bp GCAAACCTGCATGGCGTGAATTTACTCTGTCCGAGGGTGAGGAGGGGCTGCAGGTTGGGAGATCCCAGCTaGGGTGGCCGCGGAATATGC +
Preference number: 4 (lower is better)
Translates to: ANLHGVNLLCPRVRRGCRLGDPS*GGRGIC
Trigger: GCATATTCCGCGGCCACCGCAGCTGGGATCTCCCAA...CCTGCAGCCCCTCCTCACCCTCGGACAGAGTAAATTCACGCCATGCAGGTTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265969.8
ENST00000638366.1
ENST00000640909.2
CDS-3UTR GCA 90 bp CCAGTGTCCTCGGCCAAGCCGCCTGGTCAAGTCACTCTCACAGCCTCTGTCGGCGCAGGTCCACCCAGATaGTTAATAGCCACCAGTGTC +
Preference number: 4 (lower is better)
Translates to: PVSSAKPPGQVTLTASVGAGPPR*LIATSV
Trigger: GACACTGGTGGCTATTAAGCATCTGGGTGGACCTGC...GCCGACAGAGGCTGTGAGAGTGACTTGACCAGGCGGCTTGGCCGAGGACACTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638366.1
ENST00000638825.1
CDS-3UTR GCA 90 bp CCGGCAAACCTGCATGGCGTGAATTTACTCTGTCCGAGGGTGAGGAGGGGCTGCTCCGTCCTAGTACAATaGCTGGGCCACTCGGACTCG +
Preference number: 4 (lower is better)
Translates to: PANLHGVNLLCPRVRRGCSVLVQ*LGHSDS
Trigger: CGAGTCCGAGTGGCCCAGGCATTGTACTAGGACGGA...GCAGCCCCTCCTCACCCTCGGACAGAGTAAATTCACGCCATGCAGGTTTGCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265969.8
ENST00000638366.1
ENST00000638825.1
ENST00000640909.2
CDS-3UTR GCA 90 bp AAGCAGAGAGCTCGGAGCTGTTTCAGCCTCGGAGACCCCTGGCCATGTTCCTCTCGCTTTCATCTAAGCTaGCCAGGGTGGTGGCCCCCT +
Preference number: 4 (lower is better)
Translates to: KQRARSCFSLGDPWPCSSRFHLS*PGWWPP
Trigger: AGGGGGCCACCACCCTGGGCAGCTTAGATGAAAGCG...AGAGGAACATGGCCAGGGGTCTCCGAGGCTGAAACAGCTCCGAGCTCTCTGCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR GCA 90 bp CTGCCTCTGTGGAGATGGTGCCGCCTGAGACCCTTCTCTGGCTCTGAATGCTGGCCTCTGTGGAGATGGTaGCGCCTGAGACCCTTCTCT +
Preference number: 4 (lower is better)
Translates to: LPLWRWCRLRPFSGSECWPLWRW*RLRPFS
Trigger: AGAGAAGGGTCTCAGGCGGCACCATCTCCACAGAGG...CCAGCATTCAGAGCCAGAGAAGGGTCTCAGGCGGCACCATCTCCACAGAGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR GCA 90 bp TCGGAGACCCCTGGCCATGTTCCTCTCAGGCACCTACAGAAATCCCAGGAAGGGGAGGTGTCCACAGCCTaGAGTTCTTGCCTGGGGAGG +
Preference number: 4 (lower is better)
Translates to: SETPGHVPLRHLQKSQEGEVSTA*SSCLGR
Trigger: CCTCCCCAGGCAAGAACTGCAGGCTGTGGACACCTC...CCCTTCCTGGGATTTCTGTAGGTGCCTGAGAGGAACATGGCCAGGGGTCTCCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR GCA 90 bp TCGGAGACCCCTGGCCATGTTCCTCTCAGGCACCTACAGAAATCCCAGGAAGGGCTGTTGGCCATCCTCTaGCAGGGGAGGTGTCCACAG +
Preference number: 4 (lower is better)
Translates to: SETPGHVPLRHLQKSQEGLLAIL*QGRCPQ
Trigger: CTGTGGACACCTCCCCTGGCAGAGGATGGCCAACAG...CCCTTCCTGGGATTTCTGTAGGTGCCTGAGAGGAACATGGCCAGGGGTCTCCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR GCA 90 bp CCTCGGCCAAGCCGCCTGGTCAAGTCACTCTCACAGCCTCTGTCGGCATATACTGCCCAGCCAGTCTGCTaGACCAAGAAAGGTGCCCTC +
Preference number: 4 (lower is better)
Translates to: PRPSRLVKSLSQPLSAYTAQPVC*TKKGAL
Trigger: GAGGGCACCTTTCTTGGTGCAGCAGACTGGCTGGGC...AGTATATGCCGACAGAGGCTGTGAGAGTGACTTGACCAGGCGGCTTGGCCGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638825.1
CDS-3UTR GCA 90 bp GAAAAAGCTACGTCCGTCCTAGTACAATGCCTGGGCCACTCGGACTCGTCCGGCGCTGCCCAGCCAGTCTaGTGCACCAAGAAAGGTGCC +
Preference number: 4 (lower is better)
Translates to: EKATSVLVQCLGHSDSSGAAQPV*CTKKGA
Trigger: GGCACCTTTCTTGGTGCAGCAGACTGGCTGGGCAGC...GCCGGACGAGTCCGAGTGGCCCAGGCATTGTACTAGGACGGACGTAGCTTTTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638825.1
CDS-3UTR GCA 90 bp GCCAGCCTAGCACGCCTCTTTCTCTCCCTCCTGGGGGAATGGGATGAGTCCCTATCTTCTGACCCAGCCTaGTCACCCCGTTCAGCATGC +
Preference number: 4 (lower is better)
Translates to: ASLARLFLSLLGEWDESLSSDPA*SPRSAC
Trigger: GCATGCTGAACGGGGTGAGCAGGCTGGGTCAGAAGA...TAGGGACTCATCCCATTCCCCCAGGAGGGAGAGAAAGAGGCGTGCTAGGCTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638825.1
CDS-3UTR GCA 90 bp CCACCAGTGTCCTCGGCCAAGCCGCCTGGTCAAGTCACTCTCACAGCCTCTGTCATCTCCTGTGGACAGTaGTTACCGCTGGACTCCCAG +
Preference number: 4 (lower is better)
Translates to: PPVSSAKPPGQVTLTASVISCGQ*LPLDSQ
Trigger: CTGGGAGTCCAGCGGTAAGCACTGTCCACAGGAGAT...GACAGAGGCTGTGAGAGTGACTTGACCAGGCGGCTTGGCCGAGGACACTGGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638825.1
CDS-3UTR GCA 90 bp GAAAAAGCTACGTCCGTCCTAGTACAATGCCTGGGCCACTCGGACTCGTCCGGCCCAGCTGGCTTGGTTTaGCCATGCACTGAGCCAGCC +
Preference number: 4 (lower is better)
Translates to: EKATSVLVQCLGHSDSSGPAGLV*PCTEPA
Trigger: GGCTGGCTCAGTGCATGGGCAAACCAAGCCAGCTGG...GCCGGACGAGTCCGAGTGGCCCAGGCATTGTACTAGGACGGACGTAGCTTTTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638825.1
CDS-3UTR CCA 90 bp GAAACTATGGCAGAGAGGGTAACTTGCTCAAGGAGGAGAACCTTGTCCTGGGTAGGCTGCGCTCGGACTTaGGCTCCCGCGGCGGTGCTG +
Preference number: 4 (lower is better)
Translates to: ETMAERVTCSRRRTLSWVGCART*APAAVL
Trigger: CAGCACCGCCGCGGGAGCCCAAGTCCGAGCGCAGCC...TACCCAGGACAAGGTTCTCCTCCTTGAGCAAGTTACCCTCTCTGCCATAGTTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000639325.2
ENST00000640318.2
CDS-3UTR CCA 90 bp CCATGCCAAGAACACGGATCTTGTGTAGCTAAGTTCACAGGGTCCTGGCCCACTAGAGGCCTGCGGCTCTaGCCACCCCAACGAGCGAGC +
Preference number: 4 (lower is better)
Translates to: PCQEHGSCVAKFTGSWPTRGLRL*PPQRAS
Trigger: GCTCGCTCGTTGGGGTGGCCAGAGCCGCAGGCCTCT...AGTGGGCCAGGACCCTGTGAACTTAGCTACACAAGATCCGTGTTCTTGGCATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675775.1
CDS-3UTR CCA 90 bp TCGGAGACCCCTGGCCATGTTCCTCTCAGGCACCTACAGAAATCCCAGGAAGGGGGGTTGAAGCGCTCGTaGGTCTCCAGGCAGAAGGTG +
Preference number: 4 (lower is better)
Translates to: SETPGHVPLRHLQKSQEGGLKRS*VSRQKV
Trigger: CACCTTCTGCCTGGAGACCCACGAGCGCTTCAACCC...CCCTTCCTGGGATTTCTGTAGGTGCCTGAGAGGAACATGGCCAGGGGTCTCCGA
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CCA 90 bp TCGGAGACCCCTGGCCATGTTCCTCTCAGGCACCTACAGAAATCCCAGGAAGGGTGGCGCTGGGGTCATTaGGCTGTGCCCCTATCCTCT +
Preference number: 4 (lower is better)
Translates to: SETPGHVPLRHLQKSQEGWRWGH*AVPLSS
Trigger: AGAGGATAGGGGCACAGCCCAATGACCCCAGCGCCA...CCCTTCCTGGGATTTCTGTAGGTGCCTGAGAGGAACATGGCCAGGGGTCTCCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CCA 90 bp GCCACTCGGACTCGTCCGGCAAACCTGCATGGCGTGAATTTACTCTGTCCGAGGTGGCGCTGGGGTCATTaGGCTGTGCCCCTATCCTCT +
Preference number: 4 (lower is better)
Translates to: ATRTRPANLHGVNLLCPRWRWGH*AVPLSS
Trigger: AGAGGATAGGGGCACAGCCCAATGACCCCAGCGCCA...CCTCGGACAGAGTAAATTCACGCCATGCAGGTTTGCCGGACGAGTCCGAGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000640909.2
CDS-3UTR CCA 90 bp AGCCCGAAATCAGGGCAGGAATTCTACTCAGCTATGGAGACAGGCTCTGCCGGGTGTGCTCACTGGCGCTaGGGTCATTGGGCTGTGCCC +
Preference number: 4 (lower is better)
Translates to: SPKSGQEFYSAMETGSAGCAHWR*GHWAVP
Trigger: GGGCACAGCCCAATGACCCCAGCGCCAGTGAGCACA...CCCGGCAGAGCCTGTCTCCATAGCTGAGTAGAATTCCTGCCCTGATTTCGGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CCA 90 bp GTGAATTTACTCTGTCCGAGGGTGAGGAGGGGCTGCAGGTCCACCCAGATGCTTTGTGCTCACTGGCGCTaGGGTCATTGGGCTGTGCCC +
Preference number: 4 (lower is better)
Translates to: VNLLCPRVRRGCRSTQMLCAHWR*GHWAVP
Trigger: GGGCACAGCCCAATGACCCCAGCGCCAGTGAGCACA...AAGCATCTGGGTGGACCTGCAGCCCCTCCTCACCCTCGGACAGAGTAAATTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000640909.2
CDS-3UTR CCA 90 bp CAGACACACAGACTGAGGCTTCAGACGAGACCAAGAGGTGGAGGTGAGGGGCAGAGTGCGTGTGCTCACTaGCGCTGGGGTCATTGGGCT +
Preference number: 4 (lower is better)
Translates to: QTHRLRLQTRPRGGGEGQSACAH*RWGHWA
Trigger: AGCCCAATGACCCCAGCGCCAGTGAGCACACGCACT...CTGCCCCTCACCTCCACCTCTTGGTCTCGTCTGAAGCCTCAGTCTGTGTGTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CCA 90 bp CAGAGGACCTGCCCAGGCAGACTAAGAAAGCAGATCTCCCACCACTCAGCCCAGAGTGCGTGTGCTCACTaGCGCTGGGGTCATTGGGCT +
Preference number: 4 (lower is better)
Translates to: QRTCPGRLRKQISHHSAQSACAH*RWGHWA
Trigger: AGCCCAATGACCCCAGCGCCAGTGAGCACACGCACT...CTGGGCTGAGTGGTGGGAGATCTGCTTTCTTAGTCTGCCTGGGCAGGTCCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS-3UTR CCA 90 bp TCTGCAAGAGCAGCCTGGGGGAGTCAAGGCTCCTCCTGCATTCCTGGGTACCCCAGATCCCAGCTGCGGTaGCCGCGGAATATGCTTCTT +
Preference number: 4 (lower is better)
Translates to: SARAAWGSQGSSCIPGYPRSQLR*PRNMLL
Trigger: AAGAAGCATATTCCGCGGCCACCGCAGCTGGGATCT...GGGGTACCCAGGAATGCAGGAGGAGCCTTGACTCCCCCAGGCTGCTCTTGCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675775.1
CDS-3UTR CCA 90 bp ACCCATCTGCAGGAGCGCGAGGCGGCCCGGACGATGCACGGTGCTCCAGCTTCCCAGATTTACAATAATTaGGAGATCCCAGCTGCGGTG +
Preference number: 4 (lower is better)
Translates to: THLQEREAARTMHGAPASQIYNN*EIPAAV
Trigger: CACCGCAGCTGGGATCTCCCAATTATTGTAAATCTG...GGAAGCTGGAGCACCGTGCATCGTCCGGGCCGCCTCGCGCTCCTGCAGATGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675775.1
CDS-3UTR CCA 90 bp CGGACTCGTCCGGCAAACCTGCATGGCGTGAATTTACTCTGTCCGAGGGTGAGGAGGGCCTGGTCTATGTaGGGGCAGTCTTCGTTCGCC +
Preference number: 4 (lower is better)
Translates to: RTRPANLHGVNLLCPRVRRAWSM*GQSSFA
Trigger: GGCGAACGAAGACTGCCCCCACATAGACCAGGCCCT...CCTCACCCTCGGACAGAGTAAATTCACGCCATGCAGGTTTGCCGGACGAGTCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265969.8
ENST00000638366.1
ENST00000638825.1
ENST00000640909.2
CDS-3UTR CCA 90 bp TCCGGCAAACCTGCATGGCGTGAATTTACTCTGTCCGAGGGTGAGGAGGGGCTGAGGGCCTGGTCTATGTaGGGGCAGTCTTCGTTCGCC +
Preference number: 4 (lower is better)
Translates to: SGKPAWREFTLSEGEEGLRAWSM*GQSSFA
Trigger: GGCGAACGAAGACTGCCCCCACATAGACCAGGCCCT...CAGCCCCTCCTCACCCTCGGACAGAGTAAATTCACGCCATGCAGGTTTGCCGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265969.8
ENST00000638366.1
ENST00000638825.1
ENST00000640909.2
CDS-3UTR CCA 90 bp CAATGCCTGGGCCACTCGGACTCGTCCGGCAAACCTGCATGGCGTGAATTTACTCATTCCTCCACCAGGTaGGCACGCGTACTCCCCGGT +
Preference number: 4 (lower is better)
Translates to: QCLGHSDSSGKPAWREFTHSSTR*ARVLPG
Trigger: ACCGGGGAGTACGCGTGCCCACCTGGTGGAGGAATG...AGTAAATTCACGCCATGCAGGTTTGCCGGACGAGTCCGAGTGGCCCAGGCATTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265969.8
ENST00000638366.1
ENST00000638825.1
ENST00000640909.2
CDS-3UTR CCA 90 bp CTGCCTCTGTGGAGATGGTGCCGCCTGAGACCCTTCTCTGGCTCTGAATGCTGGATTGGGATGGGGTGGTaGGTCAGAGAGCGCGATAGC +
Preference number: 4 (lower is better)
Translates to: LPLWRWCRLRPFSGSECWIGMGW*VRERDS
Trigger: GCTATCGCGCTCTCTGACCCACCACCCCATCCCAAT...CCAGCATTCAGAGCCAGAGAAGGGTCTCAGGCGGCACCATCTCCACAGAGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CCA 90 bp CAGACACACAGACTGAGGCTTCAGACGAGACCAAGAGGTGGAGGTGAGGGGCAGTGGGCCCCTGAAACCTaGGACCAGGGCAAAGTGGCT +
Preference number: 4 (lower is better)
Translates to: QTHRLRLQTRPRGGGEGQWAPET*DQGKVA
Trigger: AGCCACTTTGCCCTGGTCCCAGGTTTCAGGGGCCCA...CTGCCCCTCACCTCCACCTCTTGGTCTCGTCTGAAGCCTCAGTCTGTGTGTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CCA 90 bp CTCTCAGGCACCTACAGAAATCCCAGGAAGGGAAGGGTATGCGGCAGGGTGAAAGGGACCCTGCAGCCCTaGACGCGGCACCACAAAGGA +
Preference number: 4 (lower is better)
Translates to: LSGTYRNPRKGRVCGRVKGTLQP*TRHHKG
Trigger: TCCTTTGTGGTGCCGCGTCCAGGGCTGCAGGGTCCC...TTTCACCCTGCCGCATACCCTTCCCTTCCTGGGATTTCTGTAGGTGCCTGAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CCA 90 bp CTAGCATCCCCCAAGAGGTCCTACAACCAGGTGAGAATTGGATTCTTGATACCCGGGCGCACGCGGGGCTaGGGTGGGTTGGGGGTTGCT +
Preference number: 4 (lower is better)
Translates to: LASPKRSYNQVRIGFLIPGRTRG*GGLGVA
Trigger: AGCAACCCCCAACCCACCCCAGCCCCGCGTGCGCCC...GGGTATCAAGAATCCAATTCTCACCTGGTTGTAGGACCTCTTGGGGGATGCTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CCA 90 bp CGCAACTCCTCTTGGTGGCGGATAGCCGGGGTCTCACACGCCAGCTTTTGGAGGGCCCAAAGTTCGGGATaGTTTTGGGCAGGGGACAAG +
Preference number: 4 (lower is better)
Translates to: RNSSWWRIAGVSHASFWRAQSSG*FWAGDK
Trigger: CTTGTCCCCTGCCCAAAACCATCCCGAACTTTGGGC...CCTCCAAAAGCTGGCGTGTGAGACCCCGGCTATCCGCCACCAAGAGGAGTTGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CCA 90 bp TCGGAGACCCCTGGCCATGTTCCTCTCAGGCACCTACAGAAATCCCAGGAAGGGGGCAGCGTCTCCTTCTaGGAGGGGAGTGAGGACTTG +
Preference number: 4 (lower is better)
Translates to: SETPGHVPLRHLQKSQEGGSVSF*EGSEDL
Trigger: CAAGTCCTCACTCCCCTCCCAGAAGGAGACGCTGCC...CCCTTCCTGGGATTTCTGTAGGTGCCTGAGAGGAACATGGCCAGGGGTCTCCGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CCA 90 bp CAGACACACAGACTGAGGCTTCAGACGAGACCAAGAGGTGGAGGTGAGGGGCAGGCCTCCCACTCTGGCTaGCCCAGTCTTCCATCCAAG +
Preference number: 4 (lower is better)
Translates to: QTHRLRLQTRPRGGGEGQASHSG*PSLPSK
Trigger: CTTGGATGGAAGACTGGGCCAGCCAGAGTGGGAGGC...CTGCCCCTCACCTCCACCTCTTGGTCTCGTCTGAAGCCTCAGTCTGTGTGTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CCA 90 bp TGTGAGGGCCCCAAATACTTCCTCAGCCACAGAGACTGTCCAAGCCAGAACTGTGGGCCGGGGCGTCTCTaGGGTCTTGGGGCATGTCTG +
Preference number: 4 (lower is better)
Translates to: CEGPKYFLSHRDCPSQNCGPGRL*GLGACL
Trigger: CAGACATGCCCCAAGACCCCAGAGACGCCCCGGCCC...ACAGTTCTGGCTTGGACAGTCTCTGTGGCTGAGGAAGTATTTGGGGCCCTCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CCA 90 bp AATAGCCACCAGTGTCCTCGGCCAAGCCGCCTGGTCAAGTCACTCTCACAGCCTGACAGTGCTTACCGCTaGACTCCCAGCCACTGCAGG +
Preference number: 4 (lower is better)
Translates to: NSHQCPRPSRLVKSLSQPDSAYR*TPSHCR
Trigger: CCTGCAGTGGCTGGGAGTCCAGCGGTAAGCACTGTC...AGGCTGTGAGAGTGACTTGACCAGGCGGCTTGGCCGAGGACACTGGTGGCTATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638825.1
CDS-3UTR TCA 90 bp GCCACTCGGACTCGTCCGGCAAACCTGCATGGCGTGAATTTACTCTGTCCGAGGTGTTCACGATGGGGTTaGAGCGCTCGTGGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: ATRTRPANLHGVNLLCPRCSRWG*SARGSP
Trigger: TGGAGACCCACGAGCGCTTCAACCCCATCGTGAACA...CCTCGGACAGAGTAAATTCACGCCATGCAGGTTTGCCGGACGAGTCCGAGTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000640909.2
CDS-3UTR TCA 90 bp CCACCAGTGTCCTCGGCCAAGCCGCCTGGTCAAGTCACTCTCACAGCCTCTGTCGGACATGTGTCACTCTaGGTACTGTGGTGTGGAGAG +
Preference number: 4 (lower is better)
Translates to: PPVSSAKPPGQVTLTASVGHVSL*VLWCGE
Trigger: CTCTCCACACCACAGTACTCAGAGTGACACATGTCC...GACAGAGGCTGTGAGAGTGACTTGACCAGGCGGCTTGGCCGAGGACACTGGTGG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638366.1
CDS-3UTR TCA 90 bp CTGCCTCTGTGGAGATGGTGCCGCCTGAGACCCTTCTCTGGCTCTGAATGCTGGTACAGGGGGCAGAGGTaGAAGGTCAGATCGACATGC +
Preference number: 4 (lower is better)
Translates to: LPLWRWCRLRPFSGSECWYRGQR*KVRSTC
Trigger: GCATGTCGATCTGACCTTTCACCTCTGCCCCCTGTA...CCAGCATTCAGAGCCAGAGAAGGGTCTCAGGCGGCACCATCTCCACAGAGGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR TCA 90 bp CTGCCTCTGTGGAGATGGTGCCGCCTGAGACCCTTCTCTGGCTCTGAATGCTGGTTGGGGCAACACTCCTaGAAGATCCAGTGTCGGGGA +
Preference number: 4 (lower is better)
Translates to: LPLWRWCRLRPFSGSECWLGQHS*KIQCRG
Trigger: TCCCCGACACTGGATCTTTCAGGAGTGTTGCCCCAA...CCAGCATTCAGAGCCAGAGAAGGGTCTCAGGCGGCACCATCTCCACAGAGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR TCA 90 bp AGCCCGAAATCAGGGCAGGAATTCTACTCAGCTATGGAGACAGGCTCTGCCGGGGCCTTGGGGGTACAGTaGGACTGGAAAGGCCTTGGG +
Preference number: 4 (lower is better)
Translates to: SPKSGQEFYSAMETGSAGALGVQ*DWKGLG
Trigger: CCCAAGGCCTTTCCAGTCTCACTGTACCCCCAAGGC...CCCGGCAGAGCCTGTCTCCATAGCTGAGTAGAATTCCTGCCCTGATTTCGGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR TCA 90 bp AGCCACAGCACACAGGAGGAGACCAGATTGTCCCTGGGACAGACACACAGACTGGGCACCACAAAGGACTaGCCCACATCACAGGAGCGG +
Preference number: 4 (lower is better)
Translates to: SHSTQEETRLSLGQTHRLGTTKD*PTSQER
Trigger: CCGCTCCTGTGATGTGGGTCAGTCCTTTGTGGTGCC...CAGTCTGTGTGTCTGTCCCAGGGACAATCTGGTCTCCTCCTGTGTGCTGTGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR TCA 90 bp GTGAGGGCCCCAAATACTTCCTCAGCCACAGAGACTGTCCAAGCCAGAACTGTCGGAGATGGTGCCGCCTaGGACCCTTCTCTGGCTCTG +
Preference number: 4 (lower is better)
Translates to: VRAPNTSSATETVQARTVGDGAA*DPSLAL
Trigger: CAGAGCCAGAGAAGGGTCTCAGGCGGCACCATCTCC...GACAGTTCTGGCTTGGACAGTCTCTGTGGCTGAGGAAGTATTTGGGGCCCTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR TCA 90 bp TCGGAGACCCCTGGCCATGTTCCTCTCAGGCACCTACAGAAATCCCAGGAAGGGCTTCTGGGAGGGGAGTaGGGACTTGCTGAGTCTCTG +
Preference number: 4 (lower is better)
Translates to: SETPGHVPLRHLQKSQEGLLGGE*GLAESL
Trigger: CAGAGACTCAGCAAGTCCTCACTCCCCTCCCAGAAG...CCCTTCCTGGGATTTCTGTAGGTGCCTGAGAGGAACATGGCCAGGGGTCTCCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR GCA 90 bp CCATGCCAAGAACACGGATCTTGTGTAGCTAAGTTCACAGGGTCCTGGCCCACTGGGCGCTTTGTCGGGTaGCGGTCCAGGGGAATGTGC +
Preference number: 4 (lower is better)
Translates to: PCQEHGSCVAKFTGSWPTGRFVG*RSRGMC
Trigger: GCACATTCCCCTGGACCGGCACCCGACAAAGCGCCC...AGTGGGCCAGGACCCTGTGAACTTAGCTACACAAGATCCGTGTTCTTGGCATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675775.1
CDS-3UTR GCA 90 bp CACGGGAAAGTGGTTGTACACTGGTTGGGATGTCTATATTGCTGCTGCAGTCCCGGGGGAACAGAGGCCTaGGGCTCTGGCCACCCCAAC +
Preference number: 4 (lower is better)
Translates to: HGKVVVHWLGCLYCCCSPGGTEA*GSGHPN
Trigger: GTTGGGGTGGCCAGAGCCGCAGGCCTCTGTTCCCCC...GGGACTGCAGCAGCAATATAGACATCCCAACCAGTGTACAACCACTTTCCCGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR GCA 90 bp ACTCGTCCGGCAAACCTGCATGGCGTGAATTTACTCTGTCCGAGGGTGAGGAGGGGGGTCATTGGGCTGTaGCCCTATCCTCTCGGCGTA +
Preference number: 4 (lower is better)
Translates to: TRPANLHGVNLLCPRVRRGVIGL*PYPLGV
Trigger: TACGCCGAGAGGATAGGGGCACAGCCCAATGACCCC...CCTCCTCACCCTCGGACAGAGTAAATTCACGCCATGCAGGTTTGCCGGACGAGT
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000640909.2
CDS-3UTR GCA 90 bp CTGGCGTCACTTCATTTCTCCGCTACTTCCCCCACAGCCCACCTGAGGACAACATTGGGAGATCCCAGCTaGGGTGGCCGCGGAATATGC +
Preference number: 4 (lower is better)
Translates to: LASLHFSATSPTAHLRTTLGDPS*GGRGIC
Trigger: GCATATTCCGCGGCCACCGCAGCTGGGATCTCCCAA...TGTTGTCCTCAGGTGGGCTGTGGGGGAAGTAGCGGAGAAATGAAGTGACGCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR GCA 90 bp ACTCGGACTCGTCCGGCAAACCTGCATGGCGTGAATTTACTCTGTCCGAGGGTGAGGGTGAGGAGGGGCTaGAGGTCCACCCAGATGCTT +
Preference number: 4 (lower is better)
Translates to: TRTRPANLHGVNLLCPRVRVRRG*RSTQML
Trigger: AAGCATCTGGGTGGACCTGCAGCCCCTCCTCACCCT...CACCCTCGGACAGAGTAAATTCACGCCATGCAGGTTTGCCGGACGAGTCCGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265969.8
ENST00000638366.1
ENST00000638825.1
ENST00000640909.2
CDS-3UTR GCA 90 bp GGCAAACCTGCATGGCGTGAATTTACTCTGTCCGAGGGTGAGGAGGGGCTGCAGTCCGTCCTAGTACAATaGCTGGGCCACTCGGACTCG +
Preference number: 4 (lower is better)
Translates to: GKPAWREFTLSEGEEGLQSVLVQ*LGHSDS
Trigger: CGAGTCCGAGTGGCCCAGGCATTGTACTAGGACGGA...CTGCAGCCCCTCCTCACCCTCGGACAGAGTAAATTCACGCCATGCAGGTTTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265969.8
ENST00000638366.1
ENST00000638825.1
ENST00000640909.2
CDS-3UTR GCA 90 bp GCCCAAAGTTCGGGATGGTTTTGGGCAGGGGACAAGGAACATCCATCAGGGATCCTGGGCAGCCACTGCTaGCCAGCAGGGGAAGTAGAG +
Preference number: 4 (lower is better)
Translates to: AQSSGWFWAGDKEHPSGILGSHC*PAGEVE
Trigger: CTCTACTTCCCCTGCTGGGCAGCAGTGGCTGCCCAG...GATCCCTGATGGATGTTCCTTGTCCCCTGCCCAAAACCATCCCGAACTTTGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR GCA 90 bp GTCCTCAGCAACCTGGCGGGCCGCGTTGTCTCTTCAGAACATCACGAGACCAACCTGCAGCTGGGTCCCTaGAGAAACTCTCTTAGCCCC +
Preference number: 4 (lower is better)
Translates to: VLSNLAGRVVSSEHHETNLQLGP*RNSLSP
Trigger: GGGGCTAAGAGAGTTTCTGCAGGGACCCAGCTGCAG...GTTGGTCTCGTGATGTTCTGAAGAGACAACGCGGCCCGCCAGGTTGCTGAGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR GCA 90 bp GAAAAAGCTACGTCCGTCCTAGTACAATGCCTGGGCCACTCGGACTCGTCCGGCCCAGCAACCCACAGCTaGCAGGGCCTCAAGTTCTCT +
Preference number: 4 (lower is better)
Translates to: EKATSVLVQCLGHSDSSGPATHS*QGLKFS
Trigger: AGAGAACTTGAGGCCCTGGCAGCTGTGGGTTGCTGG...GCCGGACGAGTCCGAGTGGCCCAGGCATTGTACTAGGACGGACGTAGCTTTTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638825.1
CDS-3UTR GCA 90 bp CTGGGCCACTCGGACTCGTCCGGCAAACCTGCATGGCGTGAATTTACTCTGTCCAGTCAAGGCTCCTCCTaGATTCCTGGGTACCCCTGC +
Preference number: 4 (lower is better)
Translates to: LGHSDSSGKPAWREFTLSSQGSS*IPGYPC
Trigger: GCAGGGGTACCCAGGAATGCAGGAGGAGCCTTGACT...GGACAGAGTAAATTCACGCCATGCAGGTTTGCCGGACGAGTCCGAGTGGCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638825.1
CDS-3UTR GCA 90 bp TCCGGCAAACCTGCATGGCGTGAATTTACTCTGTCCGAGGGTGAGGAGGGGCTGAAGAAAGGTGCCCTCTaGCTTCTAGGTCCGGGCCAG +
Preference number: 4 (lower is better)
Translates to: SGKPAWREFTLSEGEEGLKKGAL*LLGPGQ
Trigger: CTGGCCCGGACCTAGAAGGCAGAGGGCACCTTTCTT...CAGCCCCTCCTCACCCTCGGACAGAGTAAATTCACGCCATGCAGGTTTGCCGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638825.1
CDS-3UTR GCA 90 bp CGGACTCGTCCGGCAAACCTGCATGGCGTGAATTTACTCTGTCCGAGGGTGAGGAAGACATGCACGAGCTaGCCAGCCAGTCTGCTGCAC +
Preference number: 4 (lower is better)
Translates to: RTRPANLHGVNLLCPRVRKTCTS*PASLLH
Trigger: GTGCAGCAGACTGGCTGGGCAGCTCGTGCATGTCTT...CCTCACCCTCGGACAGAGTAAATTCACGCCATGCAGGTTTGCCGGACGAGTCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638825.1
CDS-3UTR GCA 90 bp TCCGGCAAACCTGCATGGCGTGAATTTACTCTGTCCGAGGGTGAGGAGGGGCTGAGGCACTCCAAGACATaGACGAGCTGCCCAGCCAGT +
Preference number: 4 (lower is better)
Translates to: SGKPAWREFTLSEGEEGLRHSKT*TSCPAS
Trigger: ACTGGCTGGGCAGCTCGTGCATGTCTTGGAGTGCCT...CAGCCCCTCCTCACCCTCGGACAGAGTAAATTCACGCCATGCAGGTTTGCCGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638825.1
CDS-3UTR GCA 90 bp CCACCCAGATGCTTAATAGCCACCAGTGTCCTCGGCCAAGCCGCCTGGTCAAGTCGTCTCCGTGCGGGCTaGCTCTCCTCTTCTAGGTTT +
Preference number: 4 (lower is better)
Translates to: PPRCLIATSVLGQAAWSSRLRAG*LSSSRF
Trigger: AAACCTAGAAGAGGAGAGGCAGCCCGCACGGAGACG...ACTTGACCAGGCGGCTTGGCCGAGGACACTGGTGGCTATTAAGCATCTGGGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638825.1
CDS-3UTR CCA 90 bp AGAAAAAGCTACGTCCGTCCTAGTACAATGCCTGGGCCACTCGGACTCGTCCGGAGGCGGGGGTTCTCCTaGCTGGGTTTGATTTGCGGG +
Preference number: 4 (lower is better)
Translates to: RKSYVRPSTMPGPLGLVRRRGFS*LGLICG
Trigger: CCCGCAAATCAAACCCAGCCAGGAGAACCCCCGCCT...CCGGACGAGTCCGAGTGGCCCAGGCATTGTACTAGGACGGACGTAGCTTTTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000640909.2
CDS-3UTR CCA 90 bp TGGGGAAACTATGGCAGAGAGGGTAACTTGCTCAAGGAGGAGAACCTTGTCCTGGAGCTGGGGTTCCGCTaGGCTGCGCTCGGACTTGGG +
Preference number: 4 (lower is better)
Translates to: WGNYGREGNLLKEENLVLELGFR*AALGLG
Trigger: CCCAAGTCCGAGCGCAGCCCAGCGGAACCCCAGCTC...CAGGACAAGGTTCTCCTCCTTGAGCAAGTTACCCTCTCTGCCATAGTTTCCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000639325.2
ENST00000640318.2
CDS-3UTR CCA 90 bp GTGGGGATGTGGTTTTCAGTATCTTGCATTACAGGACCACATCTGTGCCCACACCTTCTCCCCGCCTCCTaGAGGAGATGGCGGGCCCCC +
Preference number: 4 (lower is better)
Translates to: VGMWFSVSCITGPHLCPHLLPAS*RRWRAP
Trigger: GGGGGCCCGCCATCTCCTCCAGGAGGCGGGGAGAAG...GTGTGGGCACAGATGTGGTCCTGTAATGCAAGATACTGAAAACCACATCCCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000639325.2
ENST00000640318.2
CDS-3UTR CCA 90 bp GAAACTATGGCAGAGAGGGTAACTTGCTCAAGGAGGAGAACCTTGTCCTGGGTACGCTCCTCTGTGAGGTaGTCGCCGCGGCGCGCTCTC +
Preference number: 4 (lower is better)
Translates to: ETMAERVTCSRRRTLSWVRSSVR*SPRRAL
Trigger: GAGAGCGCGCCGCGGCGACCACCTCACAGAGGAGCG...TACCCAGGACAAGGTTCTCCTCCTTGAGCAAGTTACCCTCTCTGCCATAGTTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000639325.2
ENST00000640318.2
CDS-3UTR CCA 90 bp GCTACGTCCGTCCTAGTACAATGCCTGGGCCACTCGGACTCGTCCGGCAAACCTTCGGCACAAAGCTTTTaGGGGAAAGGTCAGCCGCTC +
Preference number: 4 (lower is better)
Translates to: ATSVLVQCLGHSDSSGKPSAQSF*GKGQPL
Trigger: GAGCGGCTGACCTTTCCCCCAAAAGCTTTGTGCCGA...AGGTTTGCCGGACGAGTCCGAGTGGCCCAGGCATTGTACTAGGACGGACGTAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000640909.2
CDS-3UTR CCA 90 bp AGAAAAAGCTACGTCCGTCCTAGTACAATGCCTGGGCCACTCGGACTCGTCCGGTGGCGCTGGGGTCATTaGGCTGTGCCCCTATCCTCT +
Preference number: 4 (lower is better)
Translates to: RKSYVRPSTMPGPLGLVRWRWGH*AVPLSS
Trigger: AGAGGATAGGGGCACAGCCCAATGACCCCAGCGCCA...CCGGACGAGTCCGAGTGGCCCAGGCATTGTACTAGGACGGACGTAGCTTTTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000640909.2
CDS-3UTR CCA 90 bp CACCACTCAGCCCAGGCCCCTTTGCTTCAAATCGTGTCTCAGAGGGAGAACAGTTGTGCTCACTGGCGCTaGGGTCATTGGGCTGTGCCC +
Preference number: 4 (lower is better)
Translates to: HHSAQAPLLQIVSQRENSCAHWR*GHWAVP
Trigger: GGGCACAGCCCAATGACCCCAGCGCCAGTGAGCACA...ACTGTTCTCCCTCTGAGACACGATTTGAAGCAAAGGGGCCTGGGCTGAGTGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS-3UTR CCA 90 bp CCTGGCGGGCCGCGTTGTCTCTTCAGAACATCACGAGACCAACCGCGTCAACCTAGATCCCAGCTGCGGTaGCCGCGGAATATGCTTCTT +
Preference number: 4 (lower is better)
Translates to: PGGPRCLFRTSRDQPRQPRSQLR*PRNMLL
Trigger: AAGAAGCATATTCCGCGGCCACCGCAGCTGGGATCT...AGGTTGACGCGGTTGGTCTCGTGATGTTCTGAAGAGACAACGCGGCCCGCCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CCA 90 bp CAATGCCTGGGCCACTCGGACTCGTCCGGCAAACCTGCATGGCGTGAATTTACTAGGGCCTGGTCTATGTaGGGGCAGTCTTCGTTCGCC +
Preference number: 4 (lower is better)
Translates to: QCLGHSDSSGKPAWREFTRAWSM*GQSSFA
Trigger: GGCGAACGAAGACTGCCCCCACATAGACCAGGCCCT...AGTAAATTCACGCCATGCAGGTTTGCCGGACGAGTCCGAGTGGCCCAGGCATTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265969.8
ENST00000638366.1
ENST00000638825.1
ENST00000640909.2
CDS-3UTR CCA 90 bp TCGGACTCGTCCGGCAAACCTGCATGGCGTGAATTTACTCTGTCCGAGGGTGAGCTCGGCCAAGCCGCCTaGTCAAGTCACTCTCACAGC +
Preference number: 4 (lower is better)
Translates to: SDSSGKPAWREFTLSEGELGQAA*SSHSHS
Trigger: GCTGTGAGAGTGACTTGACCAGGCGGCTTGGCCGAG...CTCACCCTCGGACAGAGTAAATTCACGCCATGCAGGTTTGCCGGACGAGTCCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265969.8
ENST00000638366.1
ENST00000638825.1
ENST00000640909.2
CDS-3UTR CCA 90 bp AAAAGCTACGTCCGTCCTAGTACAATGCCTGGGCCACTCGGACTCGTCCGGCAACTCGGCCAAGCCGCCTaGTCAAGTCACTCTCACAGC +
Preference number: 4 (lower is better)
Translates to: KSYVRPSTMPGPLGLVRQLGQAA*SSHSHS
Trigger: GCTGTGAGAGTGACTTGACCAGGCGGCTTGGCCGAG...TTGCCGGACGAGTCCGAGTGGCCCAGGCATTGTACTAGGACGGACGTAGCTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265969.8
ENST00000638366.1
ENST00000638825.1
ENST00000640909.2
CDS-3UTR CCA 90 bp GTACAATGCCTGGGCCACTCGGACTCGTCCGGCAAACCTGCATGGCGTGAATTTCTCGGCCAAGCCGCCTaGTCAAGTCACTCTCACAGC +
Preference number: 4 (lower is better)
Translates to: VQCLGHSDSSGKPAWREFLGQAA*SSHSHS
Trigger: GCTGTGAGAGTGACTTGACCAGGCGGCTTGGCCGAG...AAATTCACGCCATGCAGGTTTGCCGGACGAGTCCGAGTGGCCCAGGCATTGTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265969.8
ENST00000638366.1
ENST00000638825.1
ENST00000640909.2
CDS-3UTR CCA 90 bp AGCCCGAAATCAGGGCAGGAATTCTACTCAGCTATGGAGACAGGCTCTGCCGGGTGCAGTCCCTACCGCTaGAAACGGGGAGAACCCTCG +
Preference number: 4 (lower is better)
Translates to: SPKSGQEFYSAMETGSAGCSPYR*KRGEPS
Trigger: CGAGGGTTCTCCCCGTTTCCAGCGGTAGGGACTGCA...CCCGGCAGAGCCTGTCTCCATAGCTGAGTAGAATTCCTGCCCTGATTTCGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CCA 90 bp TCGGAGACCCCTGGCCATGTTCCTCTCAGGCACCTACAGAAATCCCAGGAAGGGAGGATTGGGATGGGGTaGTGGGTCAGAGAGCGCGAT +
Preference number: 4 (lower is better)
Translates to: SETPGHVPLRHLQKSQEGRIGMG*WVRERD
Trigger: ATCGCGCTCTCTGACCCACCACCCCATCCCAATCCT...CCCTTCCTGGGATTTCTGTAGGTGCCTGAGAGGAACATGGCCAGGGGTCTCCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CCA 90 bp GTCCTCAGCAACCTGGCGGGCCGCGTTGTCTCTTCAGAACATCACGAGACCAACCTGCCTGGAGAGCACTaGGGATTCTTGACTGGCTGG +
Preference number: 4 (lower is better)
Translates to: VLSNLAGRVVSSEHHETNLPGEH*GFLTGW
Trigger: CCAGCCAGTCAAGAATCCCCAGTGCTCTCCAGGCAG...GTTGGTCTCGTGATGTTCTGAAGAGACAACGCGGCCCGCCAGGTTGCTGAGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CCA 90 bp CCTGGCGGGCCGCGTTGTCTCTTCAGAACATCACGAGACCAACCGCGTCAACCTGCCACTAGACTGCCTTaGGGGTACAGTGAGACTGGA +
Preference number: 4 (lower is better)
Translates to: PGGPRCLFRTSRDQPRQPATRLP*GYSETG
Trigger: TCCAGTCTCACTGTACCCCCAAGGCAGTCTAGTGGC...AGGTTGACGCGGTTGGTCTCGTGATGTTCTGAAGAGACAACGCGGCCCGCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CCA 90 bp GCCCAAAGTTCGGGATGGTTTTGGGCAGGGGACAAGGAACATCCATCAGGGATCACGGAGGAGGCATTGTaGGCTGTCCAGAGTGGGCGG +
Preference number: 4 (lower is better)
Translates to: AQSSGWFWAGDKEHPSGITEEAL*AVQSGR
Trigger: CCGCCCACTCTGGACAGCCCACAATGCCTCCTCCGT...GATCCCTGATGGATGTTCCTTGTCCCCTGCCCAAAACCATCCCGAACTTTGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CCA 90 bp CCCAGGGGCACCAGTGAGGTTCCTCTAGCAGGCTCTTGCCTGCTGAATTTGGCCACATGCGAATGGGCATaGCAGGACGGAGGAGGCATT +
Preference number: 4 (lower is better)
Translates to: PRGTSEVPLAGSCLLNLATCEWA*QDGGGI
Trigger: AATGCCTCCTCCGTCCTGCCATGCCCATTCGCATGT...GGCCAAATTCAGCAGGCAAGAGCCTGCTAGAGGAACCTCACTGGTGCCCCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CCA 90 bp GCCCAAAGTTCGGGATGGTTTTGGGCAGGGGACAAGGAACATCCATCAGGGATCCACTGCTCACTGACGTaGGACCCTGCAGCCCTGGAC +
Preference number: 4 (lower is better)
Translates to: AQSSGWFWAGDKEHPSGIHCSLT*DPAALD
Trigger: GTCCAGGGCTGCAGGGTCCCACGTCAGTGAGCAGTG...GATCCCTGATGGATGTTCCTTGTCCCCTGCCCAAAACCATCCCGAACTTTGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CCA 90 bp GTGAGGGCCCCAAATACTTCCTCAGCCACAGAGACTGTCCAAGCCAGAACTGTCAGGAGAACCCGAGGCTaGGCCCTCAGTCAGCACAGC +
Preference number: 4 (lower is better)
Translates to: VRAPNTSSATETVQARTVRRTRG*ALSQHS
Trigger: GCTGTGCTGACTGAGGGCCCAGCCTCGGGTTCTCCT...GACAGTTCTGGCTTGGACAGTCTCTGTGGCTGAGGAAGTATTTGGGGCCCTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CCA 90 bp CAGGCACCGCCAAAGTACTTACTGTTCACACCAGCTGCGGGCACCGGAGGGGCGGATGCTTTCAGAAACTaGGGCATTCTCCCTCCCCAA +
Preference number: 4 (lower is better)
Translates to: QAPPKYLLFTPAAGTGGADAFRN*GILPPQ
Trigger: TTGGGGAGGGAGAATGCCCCAGTTTCTGAAAGCATC...CGCCCCTCCGGTGCCCGCAGCTGGTGTGAACAGTAAGTACTTTGGCGGTGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CCA 90 bp CCCAGGGGCACCAGTGAGGTTCCTCTAGCAGGCTCTTGCCTGCTGAATTTGGCCTCCATCAGGGATCCCTaGAGGGATGATAGCCTGGCA +
Preference number: 4 (lower is better)
Translates to: PRGTSEVPLAGSCLLNLASIRDP*RDDSLA
Trigger: TGCCAGGCTATCATCCCTCCAGGGATCCCTGATGGA...GGCCAAATTCAGCAGGCAAGAGCCTGCTAGAGGAACCTCACTGGTGCCCCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CCA 90 bp CGGACTCGTCCGGCAAACCTGCATGGCGTGAATTTACTCTGTCCGAGGGTGAGGCCGTGCCCAGCCTCCTaGTCCCTTTTTATAGGGACG +
Preference number: 4 (lower is better)
Translates to: RTRPANLHGVNLLCPRVRPCPAS*SLFIGT
Trigger: CGTCCCTATAAAAAGGGACCAGGAGGCTGGGCACGG...CCTCACCCTCGGACAGAGTAAATTCACGCCATGCAGGTTTGCCGGACGAGTCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000640909.2
CDS-3UTR CCA 90 bp ATAGCCACCAGTGTCCTCGGCCAAGCCGCCTGGTCAAGTCACTCTCACAGCCTCCCTGCCTTGGGGTCATaGCCTAAAGTCAACCTGTCC +
Preference number: 4 (lower is better)
Translates to: IATSVLGQAAWSSHSHSLPALGS*PKVNLS
Trigger: GGACAGGTTGACTTTAGGCCATGACCCCAAGGCAGG...GAGGCTGTGAGAGTGACTTGACCAGGCGGCTTGGCCGAGGACACTGGTGGCTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638825.1
CDS-3UTR CCA 90 bp CCACAGCTGCCAGGGCCTCAAGTTCTCTCTGCCAGCCTGACATCTCACTTGGGGTGGGTACCCCTGCCTTaGGGTCATGGCCTAAAGTCA +
Preference number: 4 (lower is better)
Translates to: PQLPGPQVLSASLTSHLGWVPLP*GHGLKS
Trigger: TGACTTTAGGCCATGACCCCAAGGCAGGGGTACCCA...CCCCAAGTGAGATGTCAGGCTGGCAGAGAGAACTTGAGGCCCTGGCAGCTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000638825.1
ENST00000675775.1
CDS-3UTR CCA 90 bp CTCTCTCTCCAGTGGGGACAGCCTAGCGTGCTGACTACAAAGAGACCTGGAGCACTCCTCCTGCATTCCTaGGTACCCCTGCCTTGGGGT +
Preference number: 4 (lower is better)
Translates to: LSLQWGQPSVLTTKRPGALLLHS*VPLPWG
Trigger: ACCCCAAGGCAGGGGTACCCAGGAATGCAGGAGGAG...TGCTCCAGGTCTCTTTGTAGTCAGCACGCTAGGCTGTCCCCACTGGAGAGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000638825.1
CDS-3UTR CCA 90 bp AGCACCAGTGACCAGAACCACGTTCCCTCGTCTCCGTGCGGGCTGCCTCTCCTCAATGGGTATCTCCTGTaGACAGTGCTTACCGCTGGA +
Preference number: 4 (lower is better)
Translates to: STSDQNHVPSSPCGLPLLNGYLL*TVLTAG
Trigger: TCCAGCGGTAAGCACTGTCCACAGGAGATACCCATT...GAGGAGAGGCAGCCCGCACGGAGACGAGGGAACGTGGTTCTGGTCACTGGTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638825.1
CDS-3UTR CCA 90 bp CCAGTGTCCTCGGCCAAGCCGCCTGGTCAAGTCACTCTCACAGCCTCTGTCGGCAGATTCTTCTCCAGCTaGCTTGGTTTGCCCATGCAC +
Preference number: 4 (lower is better)
Translates to: PVSSAKPPGQVTLTASVGRFFSS*LGLPMH
Trigger: GTGCATGGGCAAACCAAGCCAGCTGGAGAAGAATCT...GCCGACAGAGGCTGTGAGAGTGACTTGACCAGGCGGCTTGGCCGAGGACACTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638825.1
CDS-3UTR TCA 90 bp TCTCAGAGGGAGAACAGTAGTTCCCCTTATCTGCAGTTGCACTTTCTACAGTTTCTCCCGCGGCGGTGCTaGAGGGACAGCTCCCGGCGG +
Preference number: 4 (lower is better)
Translates to: SQRENSSSPYLQLHFLQFLPRRC*RDSSRR
Trigger: CCGCCGGGAGCTGTCCCTTCAGCACCGCCGCGGGAG...AAACTGTAGAAAGTGCAACTGCAGATAAGGGGAACTACTGTTCTCCCTCTGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000639325.2
ENST00000640318.2
CDS-3UTR TCA 90 bp AGACTAAGAAAGCAGATCTCCCACCACTCAGCCCAGGCCCCTTTGCTTCAAATCGCGTGCCGCCCACGTTaGTCACGATGCGCTCGCTCT +
Preference number: 4 (lower is better)
Translates to: RLRKQISHHSAQAPLLQIACRPR*SRCARS
Trigger: AGAGCGAGCGCATCGTGATCAACGTGGGCGGCACGC...GATTTGAAGCAAAGGGGCCTGGGCTGAGTGGTGGGAGATCTGCTTTCTTAGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000639325.2
ENST00000640318.2
CDS-3UTR TCA 90 bp AGCCCGAAATCAGGGCAGGAATTCTACTCAGCTATGGAGACAGGCTCTGCCGGGTGTTCACGATGGGGTTaGAGCGCTCGTGGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: SPKSGQEFYSAMETGSAGCSRWG*SARGSP
Trigger: TGGAGACCCACGAGCGCTTCAACCCCATCGTGAACA...CCCGGCAGAGCCTGTCTCCATAGCTGAGTAGAATTCCTGCCCTGATTTCGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR TCA 90 bp GGCCGTAGAAAAAGCTACGTCCGTCCTAGTACAATGCCTGGGCCACTCGGACTCCGAAATTGTTCACGATaGCGGGCACGGGCATGGCGA +
Preference number: 4 (lower is better)
Translates to: GRRKSYVRPSTMPGPLGLRNCSR*RARAWR
Trigger: TCGCCATGCCCGTGCCCGTCATCGTGAACAATTTCG...GAGTCCGAGTGGCCCAGGCATTGTACTAGGACGGACGTAGCTTTTTCTACGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000640909.2
CDS-3UTR TCA 90 bp GCTACGTCCGTCCTAGTACAATGCCTGGGCCACTCGGACTCGTCCGGCAAACCTGGACATGTGTCACTCTaGGTACTGTGGTGTGGAGAG +
Preference number: 4 (lower is better)
Translates to: ATSVLVQCLGHSDSSGKPGHVSL*VLWCGE
Trigger: CTCTCCACACCACAGTACTCAGAGTGACACATGTCC...AGGTTTGCCGGACGAGTCCGAGTGGCCCAGGCATTGTACTAGGACGGACGTAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265969.8
ENST00000638366.1
ENST00000640909.2
CDS-3UTR TCA 90 bp GTGAGGGCCCCAAATACTTCCTCAGCCACAGAGACTGTCCAAGCCAGAACTGTCCCTCCCGGCCCCCAGTaGATTCACGGGAAAGTGGTT +
Preference number: 4 (lower is better)
Translates to: VRAPNTSSATETVQARTVPPGPQ*IHGKVV
Trigger: AACCACTTTCCCGTGAATTCACTGGGGGCCGGGAGG...GACAGTTCTGGCTTGGACAGTCTCTGTGGCTGAGGAAGTATTTGGGGCCCTCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR TCA 90 bp CAGACACACAGACTGAGGCTTCAGACGAGACCAAGAGGTGGAGGTGAGGGGCAGGGAGTGAGGACTTGCTaGGTCTCTGTTGGCCATCCT +
Preference number: 4 (lower is better)
Translates to: QTHRLRLQTRPRGGGEGQGVRTC*VSVGHP
Trigger: AGGATGGCCAACAGAGACTCAGCAAGTCCTCACTCC...CTGCCCCTCACCTCCACCTCTTGGTCTCGTCTGAAGCCTCAGTCTGTGTGTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR TCA 90 bp AGACTAAATGCCACCTGTCACGTCAACCTCCTGCTCACCTGGCACTCCTTCTTACAAGGGTCTCCGGGCTaGGGGAGGAGGGTGTTGGGA +
Preference number: 4 (lower is better)
Translates to: RLNATCHVNLLLTWHSFLQGSPG*GRRVLG
Trigger: TCCCAACACCCTCCTCCCTCAGCCCGGAGACCCTTG...TAAGAAGGAGTGCCAGGTGAGCAGGAGGTTGACGTGACAGGTGGCATTTAGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR GCA 90 bp GGATGTGGTTTTCAGTATCTTGCATTACAGGACCACATCTGTGCCCACACTGCAGGGGTTCCGCTGGGCTaGGCTCGGACTTGGGCTCCC +
Preference number: 4 (lower is better)
Translates to: GCGFQYLALQDHICAHTAGVPLG*ARTWAP
Trigger: GGGAGCCCAAGTCCGAGCGCAGCCCAGCGGAACCCC...TGCAGTGTGGGCACAGATGTGGTCCTGTAATGCAAGATACTGAAAACCACATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000639325.2
ENST00000640318.2
CDS-3UTR GCA 90 bp ACTAAGAAAGCAGATCTCCCACCACTCAGCCCAGGCCCCTTTGCTTCAAATCGTGAGATGGATGCCGCCTaGCTTCCTCCCTGCGTGGCC +
Preference number: 4 (lower is better)
Translates to: TKKADLPPLSPGPFASNREMDAA*LPPCVA
Trigger: GGCCACGCAGGGAGGAAGGCAGGCGGCATCCATCTC...ACGATTTGAAGCAAAGGGGCCTGGGCTGAGTGGTGGGAGATCTGCTTTCTTAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000639325.2
ENST00000640318.2
CDS-3UTR GCA 90 bp TGGGGAAACTATGGCAGAGAGGGTAACTTGCTCAAGGAGGAGAACCTTGTCCTGCGGTCCAGGGGAATGTaGGCGGGATCCCAGGGGTCT +
Preference number: 4 (lower is better)
Translates to: WGNYGREGNLLKEENLVLRSRGM*AGSQGS
Trigger: AGACCCCTGGGATCCCGCGCACATTCCCCTGGACCG...CAGGACAAGGTTCTCCTCCTTGAGCAAGTTACCCTCTCTGCCATAGTTTCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000639325.2
ENST00000640318.2
CDS-3UTR GCA 90 bp ACTAAGAAAGCAGATCTCCCACCACTCAGCCCAGGCCCCTTTGCTTCAAATCGTGGGCGCTTTGTCGGGTaGCGGTCCAGGGGAATGTGC +
Preference number: 4 (lower is better)
Translates to: TKKADLPPLSPGPFASNRGRFVG*RSRGMC
Trigger: GCACATTCCCCTGGACCGGCACCCGACAAAGCGCCC...ACGATTTGAAGCAAAGGGGCCTGGGCTGAGTGGTGGGAGATCTGCTTTCTTAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000639325.2
ENST00000640318.2
CDS-3UTR GCA 90 bp TCCGGCAAACCTGCATGGCGTGAATTTACTCTGTCCGAGGGTGAGGAGGGGCTGGCACTTGCGTGCCATTaGGAACGTTCTCGATCTCCG +
Preference number: 4 (lower is better)
Translates to: SGKPAWREFTLSEGEEGLALACH*ERSRSP
Trigger: CGGAGATCGAGAACGTTCGCAATGGCACGCAAGTGC...CAGCCCCTCCTCACCCTCGGACAGAGTAAATTCACGCCATGCAGGTTTGCCGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000640909.2
CDS-3UTR GCA 90 bp TGGGAGAGGGGAGGGAAACAGTATGGAGAGGACGCGGATGACGATGTGGGGGTTGCACTTGCGTGCCATTaGGAACGTTCTCGATCTCCG +
Preference number: 4 (lower is better)
Translates to: WERGGKQYGEDADDDVGVALACH*ERSRSP
Trigger: CGGAGATCGAGAACGTTCGCAATGGCACGCAAGTGC...AACCCCCACATCGTCATCCGCGTCCTCTCCATACTGTTTCCCTCCCCTCTCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR GCA 90 bp CAGAGGACCTGCCCAGGCAGACTAAGAAAGCAGATCTCCCACCACTCAGCCCAGGCACTTGCGTGCCATTaGGAACGTTCTCGATCTCCG +
Preference number: 4 (lower is better)
Translates to: QRTCPGRLRKQISHHSAQALACH*ERSRSP
Trigger: CGGAGATCGAGAACGTTCGCAATGGCACGCAAGTGC...CTGGGCTGAGTGGTGGGAGATCTGCTTTCTTAGTCTGCCTGGGCAGGTCCTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000639325.2
ENST00000640318.2
CDS-3UTR GCA 90 bp CTAGCATCCCCCAAGAGGTCCTACAACCAGGTGAGAATTGGATTCTTGATACCCGAGCCCCCACCAGCATaGCGGACCACGTCTGCGGGT +
Preference number: 4 (lower is better)
Translates to: LASPKRSYNQVRIGFLIPEPPPA*RTTSAG
Trigger: ACCCGCAGACGTGGTCCGGCATGCTGGTGGGGGCTC...GGGTATCAAGAATCCAATTCTCACCTGGTTGTAGGACCTCTTGGGGGATGCTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR GCA 90 bp GCCAGCCTAGCACGCCTCTTTCTCTCCCTCCTGGGGGAATGGGATGAGTCCCTAGCAGGTCCACCCAGATaGTTAATAGCCACCAGTGTC +
Preference number: 4 (lower is better)
Translates to: ASLARLFLSLLGEWDESLAGPPR*LIATSV
Trigger: GACACTGGTGGCTATTAAGCATCTGGGTGGACCTGC...TAGGGACTCATCCCATTCCCCCAGGAGGGAGAGAAAGAGGCGTGCTAGGCTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638825.1
CDS-3UTR GCA 90 bp GGCGTGAATTTACTCTGTCCGAGGGTGAGGAGGGGCTGCAGGTCCACCCAGATGGCAGGTCCACCCAGATaGTTAATAGCCACCAGTGTC +
Preference number: 4 (lower is better)
Translates to: GVNLLCPRVRRGCRSTQMAGPPR*LIATSV
Trigger: GACACTGGTGGCTATTAAGCATCTGGGTGGACCTGC...CATCTGGGTGGACCTGCAGCCCCTCCTCACCCTCGGACAGAGTAAATTCACGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265969.8
ENST00000638366.1
ENST00000638825.1
ENST00000640909.2
CDS-3UTR GCA 90 bp AGAAAAAGCTACGTCCGTCCTAGTACAATGCCTGGGCCACTCGGACTCGTCCGGTCCGTCCTAGTACAATaGCTGGGCCACTCGGACTCG +
Preference number: 4 (lower is better)
Translates to: RKSYVRPSTMPGPLGLVRSVLVQ*LGHSDS
Trigger: CGAGTCCGAGTGGCCCAGGCATTGTACTAGGACGGA...CCGGACGAGTCCGAGTGGCCCAGGCATTGTACTAGGACGGACGTAGCTTTTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265969.8
ENST00000638366.1
ENST00000638825.1
ENST00000640909.2
CDS-3UTR GCA 90 bp GTCAAGGCTCCTCCTGCATTCCTGGGTACCCCTGCCTTGGGGTCATGGCCTAAAGCTGGGTCACAAGCATaGCAAACGGGGAAGAAGGCA +
Preference number: 4 (lower is better)
Translates to: VKAPPAFLGTPALGSWPKAGSQA*QTGKKA
Trigger: TGCCTTCTTCCCCGTTTGGCATGCTTGTGACCCAGC...TTTAGGCCATGACCCCAAGGCAGGGGTACCCAGGAATGCAGGAGGAGCCTTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000638825.1
CDS-3UTR GCA 90 bp TCGGACTCGTCCGGCAAACCTGCATGGCGTGAATTTACTCTGTCCGAGGGTGAGAAAGGTGGAGGAGGCTaGTCCTCCCGTGGTCCTGAT +
Preference number: 4 (lower is better)
Translates to: SDSSGKPAWREFTLSEGEKGGGG*SSRGPD
Trigger: ATCAGGACCACGGGAGGAGCAGCCTCCTCCACCTTT...CTCACCCTCGGACAGAGTAAATTCACGCCATGCAGGTTTGCCGGACGAGTCCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265969.8
CDS-3UTR GCA 90 bp CTGGCGTCACTTCATTTCTCCGCTACTTCCCCCACAGCCCACCTGAGGACAACAGAGAACCCTTGCACCTaGCTTTGCAAGGGACCCTCC +
Preference number: 4 (lower is better)
Translates to: LASLHFSATSPTAHLRTTENPCT*LCKGPS
Trigger: GGAGGGTCCCTTGCAAAGGCAGGTGCAAGGGTTCTC...TGTTGTCCTCAGGTGGGCTGTGGGGGAAGTAGCGGAGAAATGAAGTGACGCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR GCA 90 bp GCCCAGGCGGGGGCTTCTCTGAGACCTCACTGCTGTTCTAGGTGCCATGGGCAGTGTCTATATTGCTGCTaGAGTCCCTACCGCTGGAAA +
Preference number: 4 (lower is better)
Translates to: AQAGASLRPHCCSRCHGQCLYCC*SPYRWK
Trigger: TTTCCAGCGGTAGGGACTGCAGCAGCAATATAGACA...CTGCCCATGGCACCTAGAACAGCAGTGAGGTCTCAGAGAAGCCCCCGCCTGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR GCA 90 bp AAGCAGAGAGCTCGGAGCTGTTTCAGCCTCGGAGACCCCTGGCCATGTTCCTCTCTCACCCCAACCCTATaGCCATCTAGGTGCATGGCT +
Preference number: 4 (lower is better)
Translates to: KQRARSCFSLGDPWPCSSLTPTL*PSRCMA
Trigger: AGCCATGCACCTAGATGGGCATAGGGTTGGGGTGAG...AGAGGAACATGGCCAGGGGTCTCCGAGGCTGAAACAGCTCCGAGCTCTCTGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR GCA 90 bp CAGGCACCGCCAAAGTACTTACTGTTCACACCAGCTGCGGGCACCGGAGGGGCGAACCGGCACAAGTCATaGAACAAAACGAGGAGAGAG +
Preference number: 4 (lower is better)
Translates to: QAPPKYLLFTPAAGTGGANRHKS*NKTRRE
Trigger: CTCTCTCCTCGTTTTGTTGCATGACTTGTGCCGGTT...CGCCCCTCCGGTGCCCGCAGCTGGTGTGAACAGTAAGTACTTTGGCGGTGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR GCA 90 bp TCTCTGCCATCTACACAGCCTGAAGGGAGCCATGGTAAGGACCAGATCAAAGGCTTCTCTGGCTCTGAATaGTGGGCCCCCGCCCACTGG +
Preference number: 4 (lower is better)
Translates to: SLPSTQPEGSHGKDQIKGFSGSE*WAPAHW
Trigger: CCAGTGGGCGGGGGCCCAGCATTCAGAGCCAGAGAA...GCCTTTGATCTGGTCCTTACCATGGCTCCCTTCAGGCTGTGTAGATGGCAGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR GCA 90 bp AGCCCGAAATCAGGGCAGGAATTCTACTCAGCTATGGAGACAGGCTCTGCCGGGGTCTTGGGGCATGTCTaGAGGCACACACGTGTGCTC +
Preference number: 4 (lower is better)
Translates to: SPKSGQEFYSAMETGSAGVLGHV*RHTRVL
Trigger: GAGCACACGTGTGTGCCTGCAGACATGCCCCAAGAC...CCCGGCAGAGCCTGTCTCCATAGCTGAGTAGAATTCCTGCCCTGATTTCGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR GCA 90 bp CTGGCTTGTGGATTGATTATCTTTCAAGGATGCCTCTTCCATGCCAAGAACACGCCCTGCCCACCCATCTaGAGGAGCGCGAGGCGGCCC +
Preference number: 4 (lower is better)
Translates to: LACGLIIFQGCLFHAKNTPCPPI*RSARRP
Trigger: GGGCCGCCTCGCGCTCCTGCAGATGGGTGGGCAGGG...CGTGTTCTTGGCATGGAAGAGGCATCCTTGAAAGATAATCAATCCACAAGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638825.1
ENST00000675775.1
CDS-3UTR GCA 90 bp CTGCAAGGACAATGGCCTTACCCCCAAGCCCTGAAGACATCTCTCTCTTCTTGCGATTCCCTCCATCCTTaGCCCCCTCGGTGTGCCTGC +
Preference number: 4 (lower is better)
Translates to: LQGQWPYPQALKTSLSSCDSLHP*PPRCAC
Trigger: GCAGGCACACCGAGGGGGGCAAGGATGGAGGGAATC...GCAAGAAGAGAGAGATGTCTTCAGGGCTTGGGGGTAAGGCCATTGTCCTTGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000638825.1
CDS-3UTR GCA 90 bp CTGCATGGCGTGAATTTACTCTGTCCGAGGGTGAGGAGGGGCTGCAGGTCCACCCTTTGGGACTTGACCTaGCATCTGCAAGAGCAGCCT +
Preference number: 4 (lower is better)
Translates to: LHGVNLLCPRVRRGCRSTLWDLT*HLQEQP
Trigger: AGGCTGCTCTTGCAGATGGCAGGTCAAGTCCCAAAG...GGTGGACCTGCAGCCCCTCCTCACCCTCGGACAGAGTAAATTCACGCCATGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638825.1
CDS-3UTR GCA 90 bp CCATGCCAAGAACACGGATCTTGTGTAGCTAAGTTCACAGGGTCCTGGCCCACTCCTGGCCCACTCCACTaGCCTCCTCAATCAGGGGAG +
Preference number: 4 (lower is better)
Translates to: PCQEHGSCVAKFTGSWPTPGPLH*PPQSGE
Trigger: CTCCCCTGATTGAGGAGGGCAGTGGAGTGGGCCAGG...AGTGGGCCAGGACCCTGTGAACTTAGCTACACAAGATCCGTGTTCTTGGCATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638825.1
ENST00000675775.1
CDS-3UTR GCA 90 bp TCCGGCAAACCTGCATGGCGTGAATTTACTCTGTCCGAGGGTGAGGAGGGGCTGCTGCACCAAGAAAGGTaGCCTCTGCCTTCTAGGTCC +
Preference number: 4 (lower is better)
Translates to: SGKPAWREFTLSEGEEGLLHQER*PLPSRS
Trigger: GGACCTAGAAGGCAGAGGGCACCTTTCTTGGTGCAG...CAGCCCCTCCTCACCCTCGGACAGAGTAAATTCACGCCATGCAGGTTTGCCGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638825.1
CDS-3UTR GCA 90 bp CGGACTCGTCCGGCAAACCTGCATGGCGTGAATTTACTCTGTCCGAGGGTGAGGCAGCATGCATCCGTGTaGACGTGTGAGGCACTCCAA +
Preference number: 4 (lower is better)
Translates to: RTRPANLHGVNLLCPRVRQHASV*TCEALQ
Trigger: TTGGAGTGCCTCACACGTGCACACGGATGCATGCTG...CCTCACCCTCGGACAGAGTAAATTCACGCCATGCAGGTTTGCCGGACGAGTCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638825.1
CDS-3UTR GCA 90 bp CCACCCAGATGCTTAATAGCCACCAGTGTCCTCGGCCAAGCCGCCTGGTCAAGTTGGGAACCGTCTACCTaGTTTTCCCCTCACTCCTCG +
Preference number: 4 (lower is better)
Translates to: PPRCLIATSVLGQAAWSSWEPST*FSPHSS
Trigger: CGAGGAGTGAGGGGAAAAGCAGGTAGACGGTTCCCA...ACTTGACCAGGCGGCTTGGCCGAGGACACTGGTGGCTATTAAGCATCTGGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638825.1
CDS-3UTR GCA 90 bp ATAGCCACCAGTGTCCTCGGCCAAGCCGCCTGGTCAAGTCACTCTCACAGCCTCGACAGAACAGCCGCATaGAGAGGCAGGCAGATTCTT +
Preference number: 4 (lower is better)
Translates to: IATSVLGQAAWSSHSHSLDRTAA*RGRQIL
Trigger: AAGAATCTGCCTGCCTCTGCATGCGGCTGTTCTGTC...GAGGCTGTGAGAGTGACTTGACCAGGCGGCTTGGCCGAGGACACTGGTGGCTAT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638825.1
CDS-3UTR CCA 90 bp GAAACTATGGCAGAGAGGGTAACTTGCTCAAGGAGGAGAACCTTGTCCTGGGTAGAGCTGGGGTTCCGCTaGGCTGCGCTCGGACTTGGG +
Preference number: 4 (lower is better)
Translates to: ETMAERVTCSRRRTLSWVELGFR*AALGLG
Trigger: CCCAAGTCCGAGCGCAGCCCAGCGGAACCCCAGCTC...TACCCAGGACAAGGTTCTCCTCCTTGAGCAAGTTACCCTCTCTGCCATAGTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000639325.2
ENST00000640318.2
CDS-3UTR CCA 90 bp CAAGAGCAGCCTGGGGGAGTCAAGGCTCCTCCTGCATTCCTGGGTACCCCTGCCATCTCCGCGGGAAAATaGAGAAATCGGCACAAAGCT +
Preference number: 4 (lower is better)
Translates to: QEQPGGVKAPPAFLGTPAISAGK*RNRHKA
Trigger: AGCTTTGTGCCGATTTCTCCATTTTCCCGCGGAGAT...GGCAGGGGTACCCAGGAATGCAGGAGGAGCCTTGACTCCCCCAGGCTGCTCTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000675775.1
CDS-3UTR CCA 90 bp CCTCGGCCAAGCCGCCTGGTCAAGTCACTCTCACAGCCTCTGTCGGCATATACTAGATCCCAGCTGCGGTaGCCGCGGAATATGCTTCTT +
Preference number: 4 (lower is better)
Translates to: PRPSRLVKSLSQPLSAYTRSQLR*PRNMLL
Trigger: AAGAAGCATATTCCGCGGCCACCGCAGCTGGGATCT...AGTATATGCCGACAGAGGCTGTGAGAGTGACTTGACCAGGCGGCTTGGCCGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638366.1
CDS-3UTR CCA 90 bp CAAAGATCCTTTCTCATTCCTCCACCAGGTGGGCACGCGTACTCCCCGGTTGATTCGGGAGTGAGGGCCTaGTCTATGTGGGGGCAGTCT +
Preference number: 4 (lower is better)
Translates to: QRSFLIPPPGGHAYSPVDSGVRA*SMWGQS
Trigger: AGACTGCCCCCACATAGACCAGGCCCTCACTCCCGA...ATCAACCGGGGAGTACGCGTGCCCACCTGGTGGAGGAATGAGAAAGGATCTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638366.1
CDS-3UTR CCA 90 bp CCATGCCAAGAACACGGATCTTGTGTAGCTAAGTTCACAGGGTCCTGGCCCACTCATTCCTCCACCAGGTaGGCACGCGTACTCCCCGGT +
Preference number: 4 (lower is better)
Translates to: PCQEHGSCVAKFTGSWPTHSSTR*ARVLPG
Trigger: ACCGGGGAGTACGCGTGCCCACCTGGTGGAGGAATG...AGTGGGCCAGGACCCTGTGAACTTAGCTACACAAGATCCGTGTTCTTGGCATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638825.1
ENST00000675775.1
CDS-3UTR CCA 90 bp TCTGCAAGAGCAGCCTGGGGGAGTCAAGGCTCCTCCTGCATTCCTGGGTACCCCGGGGGTTGGTGGGTTTaGTTTGCTGGGTTTTCTGTT +
Preference number: 4 (lower is better)
Translates to: SARAAWGSQGSSCIPGYPGGWWV*FAGFSV
Trigger: AACAGAAAACCCAGCAAACCAAACCCACCAACCCCC...GGGGTACCCAGGAATGCAGGAGGAGCCTTGACTCCCCCAGGCTGCTCTTGCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000638825.1
CDS-3UTR CCA 90 bp GGCAAACCTGCATGGCGTGAATTTACTCTGTCCGAGGGTGAGGAGGGGCTGCAGTGGGGAGACATCCGCTaGGTCACAAGCATGCCAAAC +
Preference number: 4 (lower is better)
Translates to: GKPAWREFTLSEGEEGLQWGDIR*VTSMPN
Trigger: GTTTGGCATGCTTGTGACCCAGCGGATGTCTCCCCA...CTGCAGCCCCTCCTCACCCTCGGACAGAGTAAATTCACGCCATGCAGGTTTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000638825.1
CDS-3UTR CCA 90 bp CCTGGCGGGCCGCGTTGTCTCTTCAGAACATCACGAGACCAACCGCGTCAACCTGTGGGAGGCTGTTGCTaGTCTGTAGCGCTTTCATCT +
Preference number: 4 (lower is better)
Translates to: PGGPRCLFRTSRDQPRQPVGGCC*SVALSS
Trigger: AGATGAAAGCGCTACAGACCAGCAACAGCCTCCCAC...AGGTTGACGCGGTTGGTCTCGTGATGTTCTGAAGAGACAACGCGGCCCGCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CCA 90 bp CGCAACTCCTCTTGGTGGCGGATAGCCGGGGTCTCACACGCCAGCTTTTGGAGGAACCTCCTGCTCACCTaGCACTCCTTCTTACTCAGT +
Preference number: 4 (lower is better)
Translates to: RNSSWWRIAGVSHASFWRNLLLT*HSFLLS
Trigger: ACTGAGTAAGAAGGAGTGCCAGGTGAGCAGGAGGTT...CCTCCAAAAGCTGGCGTGTGAGACCCCGGCTATCCGCCACCAAGAGGAGTTGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CCA 90 bp GACCCCTGGCCATGTTCCTCTCAGGCACCTACAGAAATCCCAGGAAGGGAAGGGACCGGGAAACCCCCATaGGCAAAGAAATGGGCCTTG +
Preference number: 4 (lower is better)
Translates to: DPWPCSSQAPTEIPGREGTGKPP*AKKWAL
Trigger: CAAGGCCCATTTCTTTGCCCATGGGGGTTTCCCGGT...CCCTTCCCTTCCTGGGATTTCTGTAGGTGCCTGAGAGGAACATGGCCAGGGGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CCA 90 bp TCGGAGACCCCTGGCCATGTTCCTCTCAGGCACCTACAGAAATCCCAGGAAGGGCAGGGCACCTGTGCTTaGGGCAACACTCCTGAAAGA +
Preference number: 4 (lower is better)
Translates to: SETPGHVPLRHLQKSQEGQGTCA*GNTPER
Trigger: TCTTTCAGGAGTGTTGCCCCAAGCACAGGTGCCCTG...CCCTTCCTGGGATTTCTGTAGGTGCCTGAGAGGAACATGGCCAGGGGTCTCCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CCA 90 bp CTCTCAGGCACCTACAGAAATCCCAGGAAGGGAAGGGTATGCGGCAGGGTGAAACTGGGGATTCTTGACTaGCTGGCCCAGGGCACCTGT +
Preference number: 4 (lower is better)
Translates to: LSGTYRNPRKGRVCGRVKLGILD*LAQGTC
Trigger: ACAGGTGCCCTGGGCCAGCCAGTCAAGAATCCCCAG...TTTCACCCTGCCGCATACCCTTCCCTTCCTGGGATTTCTGTAGGTGCCTGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CCA 90 bp AGACTAAATGCCACCTGTCACGTCAACCTCCTGCTCACCTGGCACTCCTTCTTAGTGGGCTGTCCAGAGTaGGCGGTCTGGGCATCCGAC +
Preference number: 4 (lower is better)
Translates to: RLNATCHVNLLLTWHSFLVGCPE*AVWASD
Trigger: GTCGGATGCCCAGACCGCCCACTCTGGACAGCCCAC...TAAGAAGGAGTGCCAGGTGAGCAGGAGGTTGACGTGACAGGTGGCATTTAGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CCA 90 bp TCGGAGACCCCTGGCCATGTTCCTCTCAGGCACCTACAGAAATCCCAGGAAGGGAAGAACACCCATGCCTaGCCCCTGGCGTCACTTCAT +
Preference number: 4 (lower is better)
Translates to: SETPGHVPLRHLQKSQEGKNTHA*PLASLH
Trigger: ATGAAGTGACGCCAGGGGCCAGGCATGGGTGTTCTT...CCCTTCCTGGGATTTCTGTAGGTGCCTGAGAGGAACATGGCCAGGGGTCTCCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CCA 90 bp ACAGCTGGCTTTTCTGCCCTGGTCTCCAGGCACCGCCAAAGTACTTACTGTTCATCTGGCTCTGAATGCTaGGCCCCCGCCCACTGGTTC +
Preference number: 4 (lower is better)
Translates to: TAGFSALVSRHRQSTYCSSGSEC*APAHWF
Trigger: GAACCAGTGGGCGGGGGCCCAGCATTCAGAGCCAGA...TGAACAGTAAGTACTTTGGCGGTGCCTGGAGACCAGGGCAGAAAAGCCAGCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CCA 90 bp GTGAGGGCCCCAAATACTTCCTCAGCCACAGAGACTGTCCAAGCCAGAACTGTCCTGCCTCTGCCTCTGTaGAGATGGTGCCGCCTGAGA +
Preference number: 4 (lower is better)
Translates to: VRAPNTSSATETVQARTVLPLPL*RWCRLR
Trigger: TCTCAGGCGGCACCATCTCCACAGAGGCAGAGGCAG...GACAGTTCTGGCTTGGACAGTCTCTGTGGCTGAGGAAGTATTTGGGGCCCTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CCA 90 bp GCCCTCCTCAATCAGGGGAGAGGAGAGATCACTTTGCCTTTGGGACTTGACCTGGCCTCCCAAAGACTCTaGCACCTAAGCCTCGGTGGG +
Preference number: 4 (lower is better)
Translates to: ALLNQGRGEITLPLGLDLASQRL*HLSLGG
Trigger: CCCACCGAGGCTTAGGTGCCAGAGTCTTTGGGAGGC...CAGGTCAAGTCCCAAAGGCAAAGTGATCTCTCCTCTCCCCTGATTGAGGAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638825.1
3UTR CAA 72 bp GGGGGCAGGGGGACTCCGCACAGGATAATACTGTCATaGTCCAAGAGTACAGAGGAATCTGGGCCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: GGRGTPHRIILS*SKSTEESGPAW
Trigger: CCAGGCAGGCCCAGATTCCTCTGTACTCTTGGACAATGACAGTATTATCCTGTGCGGAGTCCCCCTGCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR CAA 72 bp GTCAAGGCTCCTCCTGCATTCCTGGGTACCCCTGCCTaGGGGTCATGGCCTAAAGTCAACCTGTCCAATCCC +
Preference number: 4 (lower is better)
Translates to: VKAPPAFLGTPA*GSWPKVNLSNP
Trigger: GGGATTGGACAGGTTGACTTTAGGCCATGACCCCAAGGCAGGGGTACCCAGGAATGCAGGAGGAGCCTTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000638825.1
ENST00000675775.1
CDS-3UTR TCA 90 bp AGAGGGCCTAGTGGTAGAAATGGTAAGTCTTGGGTATTGACTGAGTCAGCTTGCTCTCCTGGCTGGGTTTaGTTTGCGGGGCCGGCGGGC +
Preference number: 4 (lower is better)
Translates to: RGPSGRNGKSWVLTESACSPGWV*FAGPAG
Trigger: GCCCGCCGGCCCCGCAAATCAAACCCAGCCAGGAGA...GCAAGCTGACTCAGTCAATACCCAAGACTTACCATTTCTACCACTAGGCCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000639325.2
ENST00000640318.2
CDS-3UTR TCA 90 bp TTATTCGAGATGCAGAAGTGTGTCTCTGCAAACCTCCGACTGCTTCAGGAAAACATTCGCGCTCCTCTGTaGGGTGGTCGCCGCGGCGCG +
Preference number: 4 (lower is better)
Translates to: LFEMQKCVSANLRLLQENIRAPL*GGRRGA
Trigger: CGCGCCGCGGCGACCACCTCACAGAGGAGCGCGAAT...GTTTTCCTGAAGCAGTCGGAGGTTTGCAGAGACACACTTCTGCATCTCGAATAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265969.8
CDS-3UTR TCA 90 bp ATTTTGAGTAGCGTGATGAAATCTCATGCCATGTCACTCCATCCCACCCAGAACATTCGCGCTCCTCTGTaGGGTGGTCGCCGCGGCGCG +
Preference number: 4 (lower is better)
Translates to: ILSSVMKSHAMSLHPTQNIRAPL*GGRRGA
Trigger: CGCGCCGCGGCGACCACCTCACAGAGGAGCGCGAAT...GTTCTGGGTGGGATGGAGTGACATGGCATGAGATTTCATCACGCTACTCAAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000639325.2
ENST00000640318.2
CDS-3UTR TCA 90 bp GCCCAAAGTTCGGGATGGTTTTGGGCAGGGGACAAGGAACATCCATCAGGGATCCGAAATTGTTCACGATaGCGGGCACGGGCATGGCGA +
Preference number: 4 (lower is better)
Translates to: AQSSGWFWAGDKEHPSGIRNCSR*RARAWR
Trigger: TCGCCATGCCCGTGCCCGTCATCGTGAACAATTTCG...GATCCCTGATGGATGTTCCTTGTCCCCTGCCCAAAACCATCCCGAACTTTGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR TCA 90 bp AAGCAGAGAGCTCGGAGCTGTTTCAGCCTCGGAGACCCCTGGCCATGTTCCTCTGGACATGTGTCACTCTaGGTACTGTGGTGTGGAGAG +
Preference number: 4 (lower is better)
Translates to: KQRARSCFSLGDPWPCSSGHVSL*VLWCGE
Trigger: CTCTCCACACCACAGTACTCAGAGTGACACATGTCC...AGAGGAACATGGCCAGGGGTCTCCGAGGCTGAAACAGCTCCGAGCTCTCTGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR TCA 90 bp GGCAAACCTGCATGGCGTGAATTTACTCTGTCCGAGGGTGAGGAGGGGCTGCAGCAAACCTGCATGGCGTaGATTTACTCTGTCCGAGGG +
Preference number: 4 (lower is better)
Translates to: GKPAWREFTLSEGEEGLQQTCMA*IYSVRG
Trigger: CCCTCGGACAGAGTAAATTCACGCCATGCAGGTTTG...CTGCAGCCCCTCCTCACCCTCGGACAGAGTAAATTCACGCCATGCAGGTTTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265969.8
ENST00000638366.1
ENST00000638825.1
ENST00000640909.2
CDS-3UTR TCA 90 bp CGTCCTAGTACAATGCCTGGGCCACTCGGACTCGTCCGGCAAACCTGCATGGCGTGTACAGGTTTCTACTaGACGCCGTTACAGTTTGGC +
Preference number: 4 (lower is better)
Translates to: RPSTMPGPLGLVRQTCMACTGFY*TPLQFG
Trigger: GCCAAACTGTAACGGCGTTCAGTAGAAACCTGTACA...CGCCATGCAGGTTTGCCGGACGAGTCCGAGTGGCCCAGGCATTGTACTAGGACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000638825.1
CDS-3UTR TCA 90 bp CTAGCATCCCCCAAGAGGTCCTACAACCAGGTGAGAATTGGATTCTTGATACCCTCCACACCTCCAGACTaGGTGCGGGGTCCGGGGTCA +
Preference number: 4 (lower is better)
Translates to: LASPKRSYNQVRIGFLIPSTPPD*VRGPGS
Trigger: TGACCCCGGACCCCGCACTCAGTCTGGAGGTGTGGA...GGGTATCAAGAATCCAATTCTCACCTGGTTGTAGGACCTCTTGGGGGATGCTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR TCA 90 bp ACAGCTGGCTTTTCTGCCCTGGTCTCCAGGCACCGCCAAAGTACTTACTGTTCAAACTGTCTGGGCCCCTaGAACCTGGGACCAGGGCAA +
Preference number: 4 (lower is better)
Translates to: TAGFSALVSRHRQSTYCSNCLGP*NLGPGQ
Trigger: TTGCCCTGGTCCCAGGTTTCAGGGGCCCAGACAGTT...TGAACAGTAAGTACTTTGGCGGTGCCTGGAGACCAGGGCAGAAAAGCCAGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR TCA 90 bp GACCCCTGGCCATGTTCCTCTCAGGCACCTACAGAAATCCCAGGAAGGGAAGGGGACAGACACACAGACTaGGGCTTCAGACGAGACCAA +
Preference number: 4 (lower is better)
Translates to: DPWPCSSQAPTEIPGREGDRHTD*GFRRDQ
Trigger: TTGGTCTCGTCTGAAGCCTCAGTCTGTGTGTCTGTC...CCCTTCCCTTCCTGGGATTTCTGTAGGTGCCTGAGAGGAACATGGCCAGGGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR TCA 90 bp AGACTAAATGCCACCTGTCACGTCAACCTCCTGCTCACCTGGCACTCCTTCTTAAACTCTGACACCATGTaGCTGGGGCCGGGGCGTCTC +
Preference number: 4 (lower is better)
Translates to: RLNATCHVNLLLTWHSFLNSDTM*LGPGRL
Trigger: GAGACGCCCCGGCCCCAGTCACATGGTGTCAGAGTT...TAAGAAGGAGTGCCAGGTGAGCAGGAGGTTGACGTGACAGGTGGCATTTAGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR TCA 90 bp GCCCAGGCGGGGGCTTCTCTGAGACCTCACTGCTGTTCTAGGTGCCATGGGCAGCTTCCCAATTTACTCTaGACCAAAAAGGCCAGTTGC +
Preference number: 4 (lower is better)
Translates to: AQAGASLRPHCCSRCHGQLPNLL*TKKASC
Trigger: GCAACTGGCCTTTTTGGTTCAGAGTAAATTGGGAAG...CTGCCCATGGCACCTAGAACAGCAGTGAGGTCTCAGAGAAGCCCCCGCCTGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR TCA 90 bp GTCCTAGTACAATGCCTGGGCCACTCGGACTCGTCCGGCAAACCTGCATGGCGTAAGGCTCTGTCTCCCTaGGGAAAAACCAGATGGAGT +
Preference number: 4 (lower is better)
Translates to: VLVQCLGHSDSSGKPAWRKALSP*GKTRWS
Trigger: ACTCCATCTGGTTTTTCCTCAGGGAGACAGAGCCTT...ACGCCATGCAGGTTTGCCGGACGAGTCCGAGTGGCCCAGGCATTGTACTAGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000640909.2
CDS-3UTR TCA 90 bp CCAGTGTCCTCGGCCAAGCCGCCTGGTCAAGTCACTCTCACAGCCTCTGTCGGCCTCTGGCTTGTGGATTaGTTATCTTTCAAGGATGCC +
Preference number: 4 (lower is better)
Translates to: PVSSAKPPGQVTLTASVGLWLVD*LSFKDA
Trigger: GGCATCCTTGAAAGATAATCAATCCACAAGCCAGAG...GCCGACAGAGGCTGTGAGAGTGACTTGACCAGGCGGCTTGGCCGAGGACACTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638825.1
CDS-3UTR TCA 90 bp TCTGCAAGAGCAGCCTGGGGGAGTCAAGGCTCCTCCTGCATTCCTGGGTACCCCCCACTAGCAATATTCTaGCTGCAAGGACAATGGCCT +
Preference number: 4 (lower is better)
Translates to: SARAAWGSQGSSCIPGYPPLAIF*LQGQWP
Trigger: AGGCCATTGTCCTTGCAGTCAGAATATTGCTAGTGG...GGGGTACCCAGGAATGCAGGAGGAGCCTTGACTCCCCCAGGCTGCTCTTGCAGA
57% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000638825.1
CDS-3UTR TCA 90 bp GCTACGTCCGTCCTAGTACAATGCCTGGGCCACTCGGACTCGTCCGGCAAACCTATACTGGAGCAGTTGTaGATGACCATAGGCTGCACC +
Preference number: 4 (lower is better)
Translates to: ATSVLVQCLGHSDSSGKPILEQL*MTIGCT
Trigger: GGTGCAGCCTATGGTCATTCACAACTGCTCCAGTAT...AGGTTTGCCGGACGAGTCCGAGTGGCCCAGGCATTGTACTAGGACGGACGTAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638825.1
CDS-3UTR TCA 90 bp CCACCCAGATGCTTAATAGCCACCAGTGTCCTCGGCCAAGCCGCCTGGTCAAGTTTCTGCTCTGCACATTaGCTCACACACCTGCATGCC +
Preference number: 4 (lower is better)
Translates to: PPRCLIATSVLGQAAWSSFCSAH*LTHLHA
Trigger: GGCATGCAGGTGTGTGAGTCAATGTGCAGAGCAGAA...ACTTGACCAGGCGGCTTGGCCGAGGACACTGGTGGCTATTAAGCATCTGGGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638825.1
CDS-3UTR GCA 90 bp CTAGCATCCCCCAAGAGGTCCTACAACCAGGTGAGAATTGGATTCTTGATACCCTGGCTGGGTTTGATTTaGGGGGCCGGCGGGCACTGG +
Preference number: 4 (lower is better)
Translates to: LASPKRSYNQVRIGFLIPWLGLI*GAGGHW
Trigger: CCAGTGCCCGCCGGCCCCGCAAATCAAACCCAGCCA...GGGTATCAAGAATCCAATTCTCACCTGGTTGTAGGACCTCTTGGGGGATGCTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR GCA 90 bp TCTGCAGTTGCACTTTCTACAGTTTCTGTTACCTGCAGTCAGCCACAGTCCGAAGGGGGAACAGAGGCCTaGGGCTCTGGCCACCCCAAC +
Preference number: 4 (lower is better)
Translates to: SAVALSTVSVTCSQPQSEGGTEA*GSGHPN
Trigger: GTTGGGGTGGCCAGAGCCGCAGGCCTCTGTTCCCCC...TTCGGACTGTGGCTGACTGCAGGTAACAGAAACTGTAGAAAGTGCAACTGCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000639325.2
ENST00000640318.2
CDS-3UTR GCA 90 bp ACTCGTCCGGCAAACCTGCATGGCGTGAATTTACTCTGTCCGAGGGTGAGGAGGGCACTTGCGTGCCATTaGGAACGTTCTCGATCTCCG +
Preference number: 4 (lower is better)
Translates to: TRPANLHGVNLLCPRVRRALACH*ERSRSP
Trigger: CGGAGATCGAGAACGTTCGCAATGGCACGCAAGTGC...CCTCCTCACCCTCGGACAGAGTAAATTCACGCCATGCAGGTTTGCCGGACGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000640909.2
CDS-3UTR GCA 90 bp TGGGAGAGGGGAGGGAAACAGTATGGAGAGGACGCGGATGACGATGTGGGGGTTAGTAGCGCACTTGCGTaGCATTGCGAACGTTCTCGA +
Preference number: 4 (lower is better)
Translates to: WERGGKQYGEDADDDVGVSSALA*HCERSR
Trigger: TCGAGAACGTTCGCAATGGCACGCAAGTGCGCTACT...AACCCCCACATCGTCATCCGCGTCCTCTCCATACTGTTTCCCTCCCCTCTCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR GCA 90 bp GGCAAACCTGCATGGCGTGAATTTACTCTGTCCGAGGGTGAGGAGGGGCTGCAGTTCTTAAAGTGCGTGTaGTCACTGGCGCTGGGGTCA +
Preference number: 4 (lower is better)
Translates to: GKPAWREFTLSEGEEGLQFLKCV*SLALGS
Trigger: TGACCCCAGCGCCAGTGAGCACACGCACTTTAAGAA...CTGCAGCCCCTCCTCACCCTCGGACAGAGTAAATTCACGCCATGCAGGTTTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000640909.2
CDS-3UTR GCA 90 bp CAGAGGACCTGCCCAGGCAGACTAAGAAAGCAGATCTCCCACCACTCAGCCCAGTTCTTAAAGTGCGTGTaGTCACTGGCGCTGGGGTCA +
Preference number: 4 (lower is better)
Translates to: QRTCPGRLRKQISHHSAQFLKCV*SLALGS
Trigger: TGACCCCAGCGCCAGTGAGCACACGCACTTTAAGAA...CTGGGCTGAGTGGTGGGAGATCTGCTTTCTTAGTCTGCCTGGGCAGGTCCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS-3UTR GCA 90 bp AGAGGGCCTAGTGGTAGAAATGGTAAGTCTTGGGTATTGACTGAGTCAGCTTGCGAGCCCCCACCAGCATaGCGGACCACGTCTGCGGGT +
Preference number: 4 (lower is better)
Translates to: RGPSGRNGKSWVLTESACEPPPA*RTTSAG
Trigger: ACCCGCAGACGTGGTCCGGCATGCTGGTGGGGGCTC...GCAAGCTGACTCAGTCAATACCCAAGACTTACCATTTCTACCACTAGGCCCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS-3UTR GCA 90 bp CCATGCCAAGAACACGGATCTTGTGTAGCTAAGTTCACAGGGTCCTGGCCCACTTTGGGAGATCCCAGCTaGGGTGGCCGCGGAATATGC +
Preference number: 4 (lower is better)
Translates to: PCQEHGSCVAKFTGSWPTLGDPS*GGRGIC
Trigger: GCATATTCCGCGGCCACCGCAGCTGGGATCTCCCAA...AGTGGGCCAGGACCCTGTGAACTTAGCTACACAAGATCCGTGTTCTTGGCATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675775.1
CDS-3UTR GCA 90 bp CCATGCCAAGAACACGGATCTTGTGTAGCTAAGTTCACAGGGTCCTGGCCCACTAGGGTGAGGAGGGGCTaGAGGTCCACCCAGATGCTT +
Preference number: 4 (lower is better)
Translates to: PCQEHGSCVAKFTGSWPTRVRRG*RSTQML
Trigger: AAGCATCTGGGTGGACCTGCAGCCCCTCCTCACCCT...AGTGGGCCAGGACCCTGTGAACTTAGCTACACAAGATCCGTGTTCTTGGCATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638825.1
CDS-3UTR GCA 90 bp CTAGCATCCCCCAAGAGGTCCTACAACCAGGTGAGAATTGGATTCTTGATACCCCACCTCCAGACTGAGTaGGGGGTCCGGGGTCACCCA +
Preference number: 4 (lower is better)
Translates to: LASPKRSYNQVRIGFLIPHLQTE*GVRGHP
Trigger: TGGGTGACCCCGGACCCCGCACTCAGTCTGGAGGTG...GGGTATCAAGAATCCAATTCTCACCTGGTTGTAGGACCTCTTGGGGGATGCTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR GCA 90 bp CAGATCAAAGGCTGTCTAGCGTTTCCAAATCACACCCGCCCCCACTCTGTCCCATGCAAGGGACCCTCCTaGCCAGATCCCATGCACCAT +
Preference number: 4 (lower is better)
Translates to: QIKGCLAFPNHTRPHSVPCKGPS*PDPMHH
Trigger: ATGGTGCATGGGATCTGGGCAGGAGGGTCCCTTGCA...TGGGACAGAGTGGGGGCGGGTGTGATTTGGAAACGCTAGACAGCCTTTGATCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR GCA 90 bp GTGAGGGCCCCAAATACTTCCTCAGCCACAGAGACTGTCCAAGCCAGAACTGTCCCCCCTCTAGTCTTTTaGTCGGCAGCCGCTTCCATC +
Preference number: 4 (lower is better)
Translates to: VRAPNTSSATETVQARTVPPLVF*SAAASI
Trigger: GATGGAAGCGGCTGCCGAGCAAAAGACTAGAGGGGG...GACAGTTCTGGCTTGGACAGTCTCTGTGGCTGAGGAAGTATTTGGGGCCCTCAC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR GCA 90 bp GTGAGGGCCCCAAATACTTCCTCAGCCACAGAGACTGTCCAAGCCAGAACTGTCAGGAAGGGAAGGGTATaGGGCAGGGTGAAAGGACCG +
Preference number: 4 (lower is better)
Translates to: VRAPNTSSATETVQARTVRKGRV*GRVKGP
Trigger: CGGTCCTTTCACCCTGCCGCATACCCTTCCCTTCCT...GACAGTTCTGGCTTGGACAGTCTCTGTGGCTGAGGAAGTATTTGGGGCCCTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR GCA 90 bp CTCTCAGGCACCTACAGAAATCCCAGGAAGGGAAGGGTATGCGGCAGGGTGAAAGCATCCGACTGCAGATaGAGGAGGGAGCCCCTTTCT +
Preference number: 4 (lower is better)
Translates to: LSGTYRNPRKGRVCGRVKASDCR*RREPLS
Trigger: AGAAAGGGGCTCCCTCCTGCATCTGCAGTCGGATGC...TTTCACCCTGCCGCATACCCTTCCCTTCCTGGGATTTCTGTAGGTGCCTGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR GCA 90 bp GTCCTCAGCAACCTGGCGGGCCGCGTTGTCTCTTCAGAACATCACGAGACCAACGATGGACAAGACACATaGGAATGGGCATGGCAGGAC +
Preference number: 4 (lower is better)
Translates to: VLSNLAGRVVSSEHHETNDGQDT*EWAWQD
Trigger: GTCCTGCCATGCCCATTCGCATGTGTCTTGTCCATC...GTTGGTCTCGTGATGTTCTGAAGAGACAACGCGGCCCGCCAGGTTGCTGAGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR GCA 90 bp CAGATCAAAGGCTGTCTAGCGTTTCCAAATCACACCCGCCCCCACTCTGTCCCACACTGCTGTTCTAGGTaGCATGGGCAGGAAGGGAGC +
Preference number: 4 (lower is better)
Translates to: QIKGCLAFPNHTRPHSVPHCCSR*HGQEGS
Trigger: GCTCCCTTCCTGCCCATGGCACCTAGAACAGCAGTG...TGGGACAGAGTGGGGGCGGGTGTGATTTGGAAACGCTAGACAGCCTTTGATCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR GCA 90 bp AGACTAAATGCCACCTGTCACGTCAACCTCCTGCTCACCTGGCACTCCTTCTTAGTGAGCCCCCGCCCCTaGCCCATCCTTTGGATGAGA +
Preference number: 4 (lower is better)
Translates to: RLNATCHVNLLLTWHSFLVSPRP*PILWMR
Trigger: TCTCATCCAAAGGATGGGGCAGGGGCGGGGGCTCAC...TAAGAAGGAGTGCCAGGTGAGCAGGAGGTTGACGTGACAGGTGGCATTTAGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CCA 90 bp CCCCCAGAAATGTACAGGTTTCTACTGAACGCCGTTACAGTTTGGCTCCAACAATCGGCGCGGGGGAGATaGATGCCGCCTGCCTTCCTC +
Preference number: 4 (lower is better)
Translates to: PPEMYRFLLNAVTVWLQQSARGR*MPPAFL
Trigger: GAGGAAGGCAGGCGGCATCCATCTCCCCCGCGCCGA...TTGTTGGAGCCAAACTGTAACGGCGTTCAGTAGAAACCTGTACATTTCTGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000265969.8
CDS-3UTR CCA 90 bp GGGAGAGACTGTGGAGCTCAGGGGCAATCCCACAGGAGTGCATGGGTTTTACAGTCGGCACAAAGCTTTTaGGGGAAAGGTCAGCCGCTC +
Preference number: 4 (lower is better)
Translates to: GRDCGAQGQSHRSAWVLQSAQSF*GKGQPL
Trigger: GAGCGGCTGACCTTTCCCCCAAAAGCTTTGTGCCGA...CTGTAAAACCCATGCACTCCTGTGGGATTGCCCCTGAGCTCCACAGTCTCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CCA 90 bp GTACAATGCCTGGGCCACTCGGACTCGTCCGGCAAACCTGCATGGCGTGAATTTAGATCCCAGCTGCGGTaGCCGCGGAATATGCTTCTT +
Preference number: 4 (lower is better)
Translates to: VQCLGHSDSSGKPAWREFRSQLR*PRNMLL
Trigger: AAGAAGCATATTCCGCGGCCACCGCAGCTGGGATCT...AAATTCACGCCATGCAGGTTTGCCGGACGAGTCCGAGTGGCCCAGGCATTGTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265969.8
ENST00000638366.1
ENST00000640909.2
CDS-3UTR CCA 90 bp TGGTCTATGTGGGGGCAGTCTTCGTTCGCCAGCGCGGCCTTCGCCACCTCCCCACTGAGTACTGTGGTGTaGAGAGTTTACGACAGATTT +
Preference number: 4 (lower is better)
Translates to: WSMWGQSSFASAAFATSPLSTVV*RVYDRF
Trigger: AAATCTGTCGTAAACTCTCCACACCACAGTACTCAG...TGGGGAGGTGGCGAAGGCCGCGCTGGCGAACGAAGACTGCCCCCACATAGACCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638366.1
CDS-3UTR CCA 90 bp GCAAACCTGCATGGCGTGAATTTACTCTGTCCGAGGGTGAGGAGGGGCTGCAGGGTTGCAGGGGGTTGGTaGGTTTGGTTTGCTGGGTTT +
Preference number: 4 (lower is better)
Translates to: ANLHGVNLLCPRVRRGCRVAGGW*VWFAGF
Trigger: AAACCCAGCAAACCAAACCCACCAACCCCCTGCAAC...CCTGCAGCCCCTCCTCACCCTCGGACAGAGTAAATTCACGCCATGCAGGTTTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000638825.1
CDS-3UTR CCA 90 bp GACCCCTGGCCATGTTCCTCTCAGGCACCTACAGAAATCCCAGGAAGGGAAGGGCAGTCTGACTGGATCTaGAATCATCGCTACAGGGGG +
Preference number: 4 (lower is better)
Translates to: DPWPCSSQAPTEIPGREGQSDWI*NHRYRG
Trigger: CCCCCTGTAGCGATGATTCCAGATCCAGTCAGACTG...CCCTTCCCTTCCTGGGATTTCTGTAGGTGCCTGAGAGGAACATGGCCAGGGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CCA 90 bp ACAGCTGGCTTTTCTGCCCTGGTCTCCAGGCACCGCCAAAGTACTTACTGTTCAAGCTGCCCAGGGTGGTaGCCCCCTCTAGTCTTTTGC +
Preference number: 4 (lower is better)
Translates to: TAGFSALVSRHRQSTYCSSCPGW*PPLVFC
Trigger: GCAAAAGACTAGAGGGGGCCACCACCCTGGGCAGCT...TGAACAGTAAGTACTTTGGCGGTGCCTGGAGACCAGGGCAGAAAAGCCAGCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CCA 90 bp TGTGAGGGCCCCAAATACTTCCTCAGCCACAGAGACTGTCCAAGCCAGAACTGTAGCCTCGGAGACCCCTaGCCATGTTCCTCTCAGGCA +
Preference number: 4 (lower is better)
Translates to: CEGPKYFLSHRDCPSQNCSLGDP*PCSSQA
Trigger: TGCCTGAGAGGAACATGGCCAGGGGTCTCCGAGGCT...ACAGTTCTGGCTTGGACAGTCTCTGTGGCTGAGGAAGTATTTGGGGCCCTCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CCA 90 bp CTCTCAGGCACCTACAGAAATCCCAGGAAGGGAAGGGTATGCGGCAGGGTGAAACAAGCCAGAACTGTCTaGGCCCCTGAAACCTGGGAC +
Preference number: 4 (lower is better)
Translates to: LSGTYRNPRKGRVCGRVKQARTV*APETWD
Trigger: GTCCCAGGTTTCAGGGGCCCAGACAGTTCTGGCTTG...TTTCACCCTGCCGCATACCCTTCCCTTCCTGGGATTTCTGTAGGTGCCTGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CCA 90 bp CCCAGGGGCACCAGTGAGGTTCCTCTAGCAGGCTCTTGCCTGCTGAATTTGGCCTCACACGCCAGCTTTTaGAGGGAGAAGTGTTCTGGT +
Preference number: 4 (lower is better)
Translates to: PRGTSEVPLAGSCLLNLASHASF*REKCSG
Trigger: ACCAGAACACTTCTCCCTCCAAAAGCTGGCGTGTGA...GGCCAAATTCAGCAGGCAAGAGCCTGCTAGAGGAACCTCACTGGTGCCCCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CCA 90 bp CTGGCGTCACTTCATTTCTCCGCTACTTCCCCCACAGCCCACCTGAGGACAACAAGACTGGAAAGGCCTTaGGGGGCTGCATCTCATCTC +
Preference number: 4 (lower is better)
Translates to: LASLHFSATSPTAHLRTTRLERP*GAASHL
Trigger: GAGATGAGATGCAGCCCCCCAAGGCCTTTCCAGTCT...TGTTGTCCTCAGGTGGGCTGTGGGGGAAGTAGCGGAGAAATGAAGTGACGCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CCA 90 bp CCCAGGGGCACCAGTGAGGTTCCTCTAGCAGGCTCTTGCCTGCTGAATTTGGCCAGTTCGGGATGGTTTTaGGCAGGGGACAAGGAACAT +
Preference number: 4 (lower is better)
Translates to: PRGTSEVPLAGSCLLNLASSGWF*AGDKEH
Trigger: ATGTTCCTTGTCCCCTGCCCAAAACCATCCCGAACT...GGCCAAATTCAGCAGGCAAGAGCCTGCTAGAGGAACCTCACTGGTGCCCCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CCA 90 bp AGATGGCAAAGCATTTCACGTACAGTGCGTTTCTCGACAAATCCCAGGGGCTTCCTGACACCATGTGACTaGGGCCGGGGCGTCTCTGGG +
Preference number: 4 (lower is better)
Translates to: RWQSISRTVRFSTNPRGFLTPCD*GRGVSG
Trigger: CCCAGAGACGCCCCGGCCCCAGTCACATGGTGTCAG...GAAGCCCCTGGGATTTGTCGAGAAACGCACTGTACGTGAAATGCTTTGCCATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CCA 90 bp CAGAGGACCTGCCCAGGCAGACTAAGAAAGCAGATCTCCCACCACTCAGCCCAGCCATACGTGGATACATaGGAAGGCTCTGTCTCCCTG +
Preference number: 4 (lower is better)
Translates to: QRTCPGRLRKQISHHSAQPYVDT*EGSVSL
Trigger: CAGGGAGACAGAGCCTTCCCATGTATCCACGTATGG...CTGGGCTGAGTGGTGGGAGATCTGCTTTCTTAGTCTGCCTGGGCAGGTCCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS-3UTR CCA 90 bp GTGAATTTACTCTGTCCGAGGGTGAGGAGGGGCTGCAGGTCCACCCAGATGCTTTGGGTACCCCTGCCTTaGGGTCATGGCCTAAAGTCA +
Preference number: 4 (lower is better)
Translates to: VNLLCPRVRRGCRSTQMLWVPLP*GHGLKS
Trigger: TGACTTTAGGCCATGACCCCAAGGCAGGGGTACCCA...AAGCATCTGGGTGGACCTGCAGCCCCTCCTCACCCTCGGACAGAGTAAATTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638825.1
CDS-3UTR CCA 90 bp CCATGCCAAGAACACGGATCTTGTGTAGCTAAGTTCACAGGGTCCTGGCCCACTTCTGCAAGAGCAGCCTaGGGGAGTCAAGGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: PCQEHGSCVAKFTGSWPTSARAA*GSQGSS
Trigger: GGAGGAGCCTTGACTCCCCCAGGCTGCTCTTGCAGA...AGTGGGCCAGGACCCTGTGAACTTAGCTACACAAGATCCGTGTTCTTGGCATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638825.1
ENST00000675775.1
CDS-3UTR CCA 90 bp CGTAGAAAAAGCTACGTCCGTCCTAGTACAATGCCTGGGCCACTCGGACTCGTCGACTACAAAGAGACCTaGAGCAGGGGCCACCAGCAG +
Preference number: 4 (lower is better)
Translates to: RRKSYVRPSTMPGPLGLVDYKET*SRGHQQ
Trigger: CTGCTGGTGGCCCCTGCTCCAGGTCTCTTTGTAGTC...GACGAGTCCGAGTGGCCCAGGCATTGTACTAGGACGGACGTAGCTTTTTCTACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638825.1
CDS-3UTR CCA 90 bp ACTCGTCCGGCAAACCTGCATGGCGTGAATTTACTCTGTCCGAGGGTGAGGAGGGCAGGGCACAGACACTaGGAACCGTCTACCTGCTTT +
Preference number: 4 (lower is better)
Translates to: TRPANLHGVNLLCPRVRRAGHRH*EPSTCF
Trigger: AAAGCAGGTAGACGGTTCCCAGTGTCTGTGCCCTGC...CCTCCTCACCCTCGGACAGAGTAAATTCACGCCATGCAGGTTTGCCGGACGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638825.1
CDS-3UTR CCA 90 bp ACGTTCCCTCGTCTCCGTGCGGGCTGCCTCTCCTCTTCTAGGTTTGCCTTTGCTCCGAATGGATGTAGGTaGGGACACTTCACCCTTAGC +
Preference number: 4 (lower is better)
Translates to: TFPRLRAGCLSSSRFAFAPNGCR*GHFTLS
Trigger: GCTAAGGGTGAAGTGTCCCCACCTACATCCATTCGG...AGCAAAGGCAAACCTAGAAGAGGAGAGGCAGCCCGCACGGAGACGAGGGAACGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638825.1
CDS-3UTR CCA 90 bp CCACCCAGATGCTTAATAGCCACCAGTGTCCTCGGCCAAGCCGCCTGGTCAAGTTTGAGCTTCTCTTCTTaGCTCTCCCATCCCGCTTGG +
Preference number: 4 (lower is better)
Translates to: PPRCLIATSVLGQAAWSSLSFSS*LSHPAW
Trigger: CCAAGCGGGATGGGAGAGCCAAGAAGAGAAGCTCAA...ACTTGACCAGGCGGCTTGGCCGAGGACACTGGTGGCTATTAAGCATCTGGGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638825.1
3UTR CAA 72 bp ATCAGGGGAGAGGAGAGATCACTTTGCCTTTGGGACTaGACCTGCCATCTGCAAGAGCAGCCTGGGGGAGTC +
Preference number: 4 (lower is better)
Translates to: IRGEERSLCLWD*TCHLQEQPGGV
Trigger: GACTCCCCCAGGCTGCTCTTGCAGATGGCAGGTCAAGTCCCAAAGGCAAAGTGATCTCTCCTCTCCCCTGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000638825.1
ENST00000675775.1
CDS-3UTR TCA 90 bp TTTCCTCTTGATCTTGTGTACAAAAAGGAAGCAATCCATTCCCCATCTCTGTCCGAGCGCTGCTCTCCGTaGGCCCGGGCTCGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: FPLDLVYKKEAIHSPSLSERCSP*ARARAG
Trigger: CCCAGCTCGAGCCCGGGCTCACGGAGAGCAGCGCTC...GGACAGAGATGGGGAATGGATTGCTTCCTTTTTGTACACAAGATCAAGAGGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265969.8
CDS-3UTR TCA 90 bp AAGTTTCACATTTTGAGTAGCGTGATGAAATCTCATGCCATGTCACTCCATCCCGAGCGCTGCTCTCCGTaGGCCCGGGCTCGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: KFHILSSVMKSHAMSLHPERCSP*ARARAG
Trigger: CCCAGCTCGAGCCCGGGCTCACGGAGAGCAGCGCTC...GGGATGGAGTGACATGGCATGAGATTTCATCACGCTACTCAAAATGTGAAACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000639325.2
ENST00000640318.2
CDS-3UTR TCA 90 bp GATTATCTTTCAAGGATGCCTCTTCCATGCCAAGAACACGGATCTTGTGTAGCTATTCGCGCTCCTCTGTaGGGTGGTCGCCGCGGCGCG +
Preference number: 4 (lower is better)
Translates to: DYLSRMPLPCQEHGSCVAIRAPL*GGRRGA
Trigger: CGCGCCGCGGCGACCACCTCACAGAGGAGCGCGAAT...AGCTACACAAGATCCGTGTTCTTGGCATGGAAGAGGCATCCTTGAAAGATAATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675775.1
CDS-3UTR TCA 90 bp GGCAAACCTGCATGGCGTGAATTTACTCTGTCCGAGGGTGAGGAGGGGCTGCAGGGTCAATATGACCGATaGCTGACCGACTGCCCTTTT +
Preference number: 4 (lower is better)
Translates to: GKPAWREFTLSEGEEGLQGQYDR*LTDCPF
Trigger: AAAAGGGCAGTCGGTCAGTCATCGGTCATATTGACC...CTGCAGCCCCTCCTCACCCTCGGACAGAGTAAATTCACGCCATGCAGGTTTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000638825.1
CDS-3UTR TCA 90 bp AAAAGCTACGTCCGTCCTAGTACAATGCCTGGGCCACTCGGACTCGTCCGGCAAGGGAGGGGAGGTTGTTaGGCTAAAGCATCATTGCTC +
Preference number: 4 (lower is better)
Translates to: KSYVRPSTMPGPLGLVRQGRGGC*AKASLL
Trigger: GAGCAATGATGCTTTAGCTCAACAACCTCCCCTCCC...TTGCCGGACGAGTCCGAGTGGCCCAGGCATTGTACTAGGACGGACGTAGCTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265969.8
CDS-3UTR TCA 90 bp GGGAGAGACTGTGGAGCTCAGGGGCAATCCCACAGGAGTGCATGGGTTTTACAGAGGCTTGAAATGGGCTaGGATGAGCATCTGCGAGAG +
Preference number: 4 (lower is better)
Translates to: GRDCGAQGQSHRSAWVLQRLEMG*DEHLRE
Trigger: CTCTCGCAGATGCTCATCTCAGCCCATTTCAAGCCT...CTGTAAAACCCATGCACTCCTGTGGGATTGCCCCTGAGCTCCACAGTCTCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR TCA 90 bp CAGGTTTCTACTGAACGCCGTTACAGTTTGGCTCCAACAACGTGTGTGAAAGTCGCTGTCGTGGCTCCATaGGAGCGCGGGCCGAATGGA +
Preference number: 4 (lower is better)
Translates to: QVSTERRYSLAPTTCVKVAVVAP*ERGPNG
Trigger: TCCATTCGGCCCGCGCTCTCATGGAGCCACGACAGC...GACTTTCACACACGTTGTTGGAGCCAAACTGTAACGGCGTTCAGTAGAAACCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638825.1
CDS-3UTR GCA 90 bp AAGAAGGCAGCCGTGCGAGTTTCCACAATTCTATTTGGAGCAAAGTTCTCAGTTGGGGTTCCGCTGGGCTaGGCTCGGACTTGGGCTCCC +
Preference number: 4 (lower is better)
Translates to: KKAAVRVSTILFGAKFSVGVPLG*ARTWAP
Trigger: GGGAGCCCAAGTCCGAGCGCAGCCCAGCGGAACCCC...AACTGAGAACTTTGCTCCAAATAGAATTGTGGAAACTCGCACGGCTGCCTTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265969.8
CDS-3UTR GCA 90 bp TCTGCAGTTGCACTTTCTACAGTTTCTGTTACCTGCAGTCAGCCACAGTCCGAACGGTCCAGGGGAATGTaGGCGGGATCCCAGGGGTCT +
Preference number: 4 (lower is better)
Translates to: SAVALSTVSVTCSQPQSERSRGM*AGSQGS
Trigger: AGACCCCTGGGATCCCGCGCACATTCCCCTGGACCG...TTCGGACTGTGGCTGACTGCAGGTAACAGAAACTGTAGAAAGTGCAACTGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000639325.2
ENST00000640318.2
CDS-3UTR GCA 90 bp GCAAAGGTTGAGTCCTCAATAGGAACTCCATACGTGGATACATGGGAAGGCTCTCGGTCCAGGGGAATGTaGGCGGGATCCCAGGGGTCT +
Preference number: 4 (lower is better)
Translates to: AKVESSIGTPYVDTWEGSRSRGM*AGSQGS
Trigger: AGACCCCTGGGATCCCGCGCACATTCCCCTGGACCG...AGAGCCTTCCCATGTATCCACGTATGGAGTTCCTATTGAGGACTCAACCTTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000640909.2
CDS-3UTR GCA 90 bp TCGGACTCGTCCGGCAAACCTGCATGGCGTGAATTTACTCTGTCCGAGGGTGAGAGTAGCGCACTTGCGTaGCATTGCGAACGTTCTCGA +
Preference number: 4 (lower is better)
Translates to: SDSSGKPAWREFTLSEGESSALA*HCERSR
Trigger: TCGAGAACGTTCGCAATGGCACGCAAGTGCGCTACT...CTCACCCTCGGACAGAGTAAATTCACGCCATGCAGGTTTGCCGGACGAGTCCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000640909.2
CDS-3UTR GCA 90 bp GTACAATGCCTGGGCCACTCGGACTCGTCCGGCAAACCTGCATGGCGTGAATTTTTCTTAAAGTGCGTGTaGTCACTGGCGCTGGGGTCA +
Preference number: 4 (lower is better)
Translates to: VQCLGHSDSSGKPAWREFFLKCV*SLALGS
Trigger: TGACCCCAGCGCCAGTGAGCACACGCACTTTAAGAA...AAATTCACGCCATGCAGGTTTGCCGGACGAGTCCGAGTGGCCCAGGCATTGTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000640909.2
CDS-3UTR GCA 90 bp GGCCGTAGAAAAAGCTACGTCCGTCCTAGTACAATGCCTGGGCCACTCGGACTCGGGATGTTCTTAAAGTaGGTGTGCTCACTGGCGCTG +
Preference number: 4 (lower is better)
Translates to: GRRKSYVRPSTMPGPLGLGMFLK*VCSLAL
Trigger: CAGCGCCAGTGAGCACACGCACTTTAAGAACATCCC...GAGTCCGAGTGGCCCAGGCATTGTACTAGGACGGACGTAGCTTTTTCTACGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000640909.2
CDS-3UTR GCA 90 bp AGCCGTGCGAGTTTCCACAATTCTATTTGGAGCAAAGTTCTCAGTTTCCACGTGGAGCCCCCACCAGCATaGCGGACCACGTCTGCGGGT +
Preference number: 4 (lower is better)
Translates to: SRASFHNSIWSKVLSFHVEPPPA*RTTSAG
Trigger: ACCCGCAGACGTGGTCCGGCATGCTGGTGGGGGCTC...CACGTGGAAACTGAGAACTTTGCTCCAAATAGAATTGTGGAAACTCGCACGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265969.8
CDS-3UTR GCA 90 bp TGCCCACACTGCAGAATAACCTTTGTCCATTCTAGAGAGAGCCTGCAAAGTACAGAGCCCCCACCAGCATaGCGGACCACGTCTGCGGGT +
Preference number: 4 (lower is better)
Translates to: CPHCRITFVHSRESLQSTEPPPA*RTTSAG
Trigger: ACCCGCAGACGTGGTCCGGCATGCTGGTGGGGGCTC...TGTACTTTGCAGGCTCTCTCTAGAATGGACAAAGGTTATTCTGCAGTGTGGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS-3UTR GCA 90 bp CAGGCACCGCCAAAGTACTTACTGTTCACACCAGCTGCGGGCACCGGAGGGGCGTTCTTTGGTAGTTTCTaGTTAGCCATGGCTAAGGAG +
Preference number: 4 (lower is better)
Translates to: QAPPKYLLFTPAAGTGGAFFGSF*LAMAKE
Trigger: CTCCTTAGCCATGGCTAAGCAGAAACTACCAAAGAA...CGCCCCTCCGGTGCCCGCAGCTGGTGTGAACAGTAAGTACTTTGGCGGTGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR GCA 90 bp TCGGACTCGTCCGGCAAACCTGCATGGCGTGAATTTACTCTGTCCGAGGGTGAGGCAGGTCCACCCAGATaGTTAATAGCCACCAGTGTC +
Preference number: 4 (lower is better)
Translates to: SDSSGKPAWREFTLSEGEAGPPR*LIATSV
Trigger: GACACTGGTGGCTATTAAGCATCTGGGTGGACCTGC...CTCACCCTCGGACAGAGTAAATTCACGCCATGCAGGTTTGCCGGACGAGTCCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265969.8
ENST00000638366.1
ENST00000638825.1
ENST00000640909.2
CDS-3UTR GCA 90 bp CGGACTCGTCCGGCAAACCTGCATGGCGTGAATTTACTCTGTCCGAGGGTGAGGGCAGAAGTGTGTCTCTaGAAACCTCCGACTGCTTCA +
Preference number: 4 (lower is better)
Translates to: RTRPANLHGVNLLCPRVRAEVCL*KPPTAS
Trigger: TGAAGCAGTCGGAGGTTTGCAGAGACACACTTCTGC...CCTCACCCTCGGACAGAGTAAATTCACGCCATGCAGGTTTGCCGGACGAGTCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265969.8
CDS-3UTR GCA 90 bp AGACTAAATGCCACCTGTCACGTCAACCTCCTGCTCACCTGGCACTCCTTCTTACCTTGCACCTGCCTTTaGAAGGGACCCTCCTGCCCA +
Preference number: 4 (lower is better)
Translates to: RLNATCHVNLLLTWHSFLPCTCL*KGPSCP
Trigger: TGGGCAGGAGGGTCCCTTGCAAAGGCAGGTGCAAGG...TAAGAAGGAGTGCCAGGTGAGCAGGAGGTTGACGTGACAGGTGGCATTTAGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR GCA 90 bp CAGATCAAAGGCTGTCTAGCGTTTCCAAATCACACCCGCCCCCACTCTGTCCCAGTCACGTCAACCTCCTaGTCACCTGGCACTCCTTCT +
Preference number: 4 (lower is better)
Translates to: QIKGCLAFPNHTRPHSVPVTSTS*SPGTPS
Trigger: AGAAGGAGTGCCAGGTGAGCAGGAGGTTGACGTGAC...TGGGACAGAGTGGGGGCGGGTGTGATTTGGAAACGCTAGACAGCCTTTGATCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR GCA 90 bp TGTGAGGGCCCCAAATACTTCCTCAGCCACAGAGACTGTCCAAGCCAGAACTGTGGAAAAGAACACCCATaGCTGGCCCCTGGCGTCACT +
Preference number: 4 (lower is better)
Translates to: CEGPKYFLSHRDCPSQNCGKEHP*LAPGVT
Trigger: AGTGACGCCAGGGGCCAGGCATGGGTGTTCTTTTCC...ACAGTTCTGGCTTGGACAGTCTCTGTGGCTGAGGAAGTATTTGGGGCCCTCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR GCA 90 bp GCCCAAAGTTCGGGATGGTTTTGGGCAGGGGACAAGGAACATCCATCAGGGATCGGGAAGCTTAAGTCTTaGTCTGTGAAGGGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: AQSSGWFWAGDKEHPSGIGKLKS*SVKGPR
Trigger: CCTGGGCCCCTTCACAGAGCAAGACTTAAGCTTCCC...GATCCCTGATGGATGTTCCTTGTCCCCTGCCCAAAACCATCCCGAACTTTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR GCA 90 bp GCCCTCCTCAATCAGGGGAGAGGAGAGATCACTTTGCCTTTGGGACTTGACCTGCCGGACGATGCACGGTaGTCCAGCTTCCTCTACATA +
Preference number: 4 (lower is better)
Translates to: ALLNQGRGEITLPLGLDLPDDAR*SSFLYI
Trigger: TATGTAGAGGAAGCTGGAGCACCGTGCATCGTCCGG...CAGGTCAAGTCCCAAAGGCAAAGTGATCTCTCCTCTCCCCTGATTGAGGAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638825.1
ENST00000675775.1
CDS-3UTR GCA 90 bp GGATTGATTATCTTTCAAGGATGCCTCTTCCATGCCAAGAACACGGATCTTGTGCCTTGCCCGCCGCCCTaGCCACCCATCTGCAGGAGC +
Preference number: 4 (lower is better)
Translates to: GLIIFQGCLFHAKNTDLVPCPPP*PPICRS
Trigger: GCTCCTGCAGATGGGTGGGCAGGGCGGCGGGCAAGG...CACAAGATCCGTGTTCTTGGCATGGAAGAGGCATCCTTGAAAGATAATCAATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638825.1
ENST00000675775.1
CDS-3UTR GCA 90 bp GGATTGATTATCTTTCAAGGATGCCTCTTCCATGCCAAGAACACGGATCTTGTGCTCGGTGTGCCTGCCTaGCCCTCAGCGCCCTTGCCC +
Preference number: 4 (lower is better)
Translates to: GLIIFQGCLFHAKNTDLVLGVPA*PSAPLP
Trigger: GGGCAAGGGCGCTGAGGGGCAGGCAGGCACACCGAG...CACAAGATCCGTGTTCTTGGCATGGAAGAGGCATCCTTGAAAGATAATCAATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638825.1
ENST00000675775.1
CDS-3UTR GCA 90 bp CCATGCCAAGAACACGGATCTTGTGTAGCTAAGTTCACAGGGTCCTGGCCCACTAGTCAAGGCTCCTCCTaGATTCCTGGGTACCCCTGC +
Preference number: 4 (lower is better)
Translates to: PCQEHGSCVAKFTGSWPTSQGSS*IPGYPC
Trigger: GCAGGGGTACCCAGGAATGCAGGAGGAGCCTTGACT...AGTGGGCCAGGACCCTGTGAACTTAGCTACACAAGATCCGTGTTCTTGGCATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638825.1
ENST00000675775.1
CDS-3UTR GCA 90 bp ATGCCAAACGGGGAAGAAGGCAGCCGTGCGAGTTTCCACAATTCTATTTGGAGCGGGGCAGGACCGTCCTaGTCAACCACCTTCTCTTGG +
Preference number: 4 (lower is better)
Translates to: MPNGEEGSRASFHNSIWSGAGPS*STTFSW
Trigger: CCAAGAGAAGGTGGTTGAGCAGGACGGTCCTGCCCC...GCTCCAAATAGAATTGTGGAAACTCGCACGGCTGCCTTCTTCCCCGTTTGGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638825.1
CDS-3UTR GCA 90 bp CCCCCAGAAATGTACAGGTTTCTACTGAACGCCGTTACAGTTTGGCTCCAACAAGCAGAGGCCTGTGGGTaGTGCGGATGGAAGGGGCAG +
Preference number: 4 (lower is better)
Translates to: PPEMYRFLLNAVTVWLQQAEACG*CGWKGQ
Trigger: CTGCCCCTTCCATCCGCAGCACCCACAGGCCTCTGC...TTGTTGGAGCCAAACTGTAACGGCGTTCAGTAGAAACCTGTACATTTCTGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638825.1
CDS-3UTR GCA 90 bp CCTCGGCCAAGCCGCCTGGTCAAGTCACTCTCACAGCCTCTGTCGGCATATACTGGCTGCACCAACTGTTaGTTTCAAAAACCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: PRPSRLVKSLSQPLSAYTGCTNC*FQKPSS
Trigger: GGAGCTGGGTTTTTGAAAGCAACAGTTGGTGCAGCC...AGTATATGCCGACAGAGGCTGTGAGAGTGACTTGACCAGGCGGCTTGGCCGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638825.1
CDS-3UTR CCA 90 bp AATATTCAAGTCTTAGAAGGGGCAGTGATATGTTTCAGTTGTGAGCCAGCCAGAAGCCCGGGCTCGAGCTaGGGTTCCGCTGGGCTGCGC +
Preference number: 4 (lower is better)
Translates to: NIQVLEGAVICFSCEPARSPGSS*GSAGLR
Trigger: GCGCAGCCCAGCGGAACCCCAGCTCGAGCCCGGGCT...TCTGGCTGGCTCACAACTGAAACATATCACTGCCCCTTCTAAGACTTGAATATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000639325.2
ENST00000640318.2
CDS-3UTR CCA 90 bp TCTCAGAGGGAGAACAGTAGTTCCCCTTATCTGCAGTTGCACTTTCTACAGTTTGCCTTCCTCCCTGCGTaGCCGGGCTGCAGCTCGGGA +
Preference number: 4 (lower is better)
Translates to: SQRENSSSPYLQLHFLQFAFLPA*PGCSSG
Trigger: TCCCGAGCTGCAGCCCGGCCACGCAGGGAGGAAGGC...AAACTGTAGAAAGTGCAACTGCAGATAAGGGGAACTACTGTTCTCCCTCTGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000639325.2
ENST00000640318.2
CDS-3UTR CCA 90 bp TCTAGAGAGAGCCTGCAAAGTACAGATGACCATGGTATACTTGGGAATGTTGGGTCGGCGCGGGGGAGATaGATGCCGCCTGCCTTCCTC +
Preference number: 4 (lower is better)
Translates to: SRESLQSTDDHGILGNVGSARGR*MPPAFL
Trigger: GAGGAAGGCAGGCGGCATCCATCTCCCCCGCGCCGA...CCCAACATTCCCAAGTATACCATGGTCATCTGTACTTTGCAGGCTCTCTCTAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000639325.2
ENST00000640318.2
CDS-3UTR CCA 90 bp GCCCTCCTCAATCAGGGGAGAGGAGAGATCACTTTGCCTTTGGGACTTGACCTGTCGGCACAAAGCTTTTaGGGGAAAGGTCAGCCGCTC +
Preference number: 4 (lower is better)
Translates to: ALLNQGRGEITLPLGLDLSAQSF*GKGQPL
Trigger: GAGCGGCTGACCTTTCCCCCAAAAGCTTTGTGCCGA...CAGGTCAAGTCCCAAAGGCAAAGTGATCTCTCCTCTCCCCTGATTGAGGAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000675775.1
CDS-3UTR CCA 90 bp TGCCCACACTGCAGAATAACCTTTGTCCATTCTAGAGAGAGCCTGCAAAGTACAAGAGGCCTGCGGCTCTaGCCACCCCAACGAGCGAGC +
Preference number: 4 (lower is better)
Translates to: CPHCRITFVHSRESLQSTRGLRL*PPQRAS
Trigger: GCTCGCTCGTTGGGGTGGCCAGAGCCGCAGGCCTCT...TGTACTTTGCAGGCTCTCTCTAGAATGGACAAAGGTTATTCTGCAGTGTGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000639325.2
ENST00000640318.2
CDS-3UTR CCA 90 bp GAGAGCCTGCAAAGTACAGATGACCATGGTATACTTGGGAATGTTGGGTTTATAGCCCAGCGACACCCATaGGAGCGGCCGCCAGGGGGA +
Preference number: 4 (lower is better)
Translates to: ESLQSTDDHGILGNVGFIAQRHP*ERPPGG
Trigger: TCCCCCTGGCGGCCGCTCCCATGGGTGTCGCTGGGC...TATAAACCCAACATTCCCAAGTATACCATGGTCATCTGTACTTTGCAGGCTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000639325.2
ENST00000640318.2
CDS-3UTR CCA 90 bp CGTCCTAGTACAATGCCTGGGCCACTCGGACTCGTCCGGCAAACCTGCATGGCGCAGATTTACAATAATTaGGAGATCCCAGCTGCGGTG +
Preference number: 4 (lower is better)
Translates to: RPSTMPGPLGLVRQTCMAQIYNN*EIPAAV
Trigger: CACCGCAGCTGGGATCTCCCAATTATTGTAAATCTG...CGCCATGCAGGTTTGCCGGACGAGTCCGAGTGGCCCAGGCATTGTACTAGGACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265969.8
ENST00000638366.1
ENST00000640909.2
CDS-3UTR CCA 90 bp CGCAACTCCTCTTGGTGGCGGATAGCCGGGGTCTCACACGCCAGCTTTTGGAGGCAGATTTACAATAATTaGGAGATCCCAGCTGCGGTG +
Preference number: 4 (lower is better)
Translates to: RNSSWWRIAGVSHASFWRQIYNN*EIPAAV
Trigger: CACCGCAGCTGGGATCTCCCAATTATTGTAAATCTG...CCTCCAAAAGCTGGCGTGTGAGACCCCGGCTATCCGCCACCAAGAGGAGTTGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CCA 90 bp CCACCCAGATGCTTAATAGCCACCAGTGTCCTCGGCCAAGCCGCCTGGTCAAGTTCCGGCAAACCTGCATaGCGTGAATTTACTCTGTCC +
Preference number: 4 (lower is better)
Translates to: PPRCLIATSVLGQAAWSSSGKPA*REFTLS
Trigger: GGACAGAGTAAATTCACGCCATGCAGGTTTGCCGGA...ACTTGACCAGGCGGCTTGGCCGAGGACACTGGTGGCTATTAAGCATCTGGGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638366.1
ENST00000638825.1
CDS-3UTR CCA 90 bp GGCCGTAGAAAAAGCTACGTCCGTCCTAGTACAATGCCTGGGCCACTCGGACTCGTTGCAGGGGGTTGGTaGGTTTGGTTTGCTGGGTTT +
Preference number: 4 (lower is better)
Translates to: GRRKSYVRPSTMPGPLGLVAGGW*VWFAGF
Trigger: AAACCCAGCAAACCAAACCCACCAACCCCCTGCAAC...GAGTCCGAGTGGCCCAGGCATTGTACTAGGACGGACGTAGCTTTTTCTACGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000638825.1
CDS-3UTR CCA 90 bp AGATGGCAAAGCATTTCACGTACAGTGCGTTTCTCGACAAATCCCAGGGGCTTCGGAAGGACCTCGAGCTaGGCAGCCCGAAATCAGGGC +
Preference number: 4 (lower is better)
Translates to: RWQSISRTVRFSTNPRGFGRTSS*AARNQG
Trigger: GCCCTGATTTCGGGCTGCCCAGCTCGAGGTCCTTCC...GAAGCCCCTGGGATTTGTCGAGAAACGCACTGTACGTGAAATGCTTTGCCATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CCA 90 bp TCTCTGCCATCTACACAGCCTGAAGGGAGCCATGGTAAGGACCAGATCAAAGGCCTAAGCTGCCCAGGGTaGTGGCCCCCTCTAGTCTTT +
Preference number: 4 (lower is better)
Translates to: SLPSTQPEGSHGKDQIKGLSCPG*WPPLVF
Trigger: AAAGACTAGAGGGGGCCACCACCCTGGGCAGCTTAG...GCCTTTGATCTGGTCCTTACCATGGCTCCCTTCAGGCTGTGTAGATGGCAGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CCA 90 bp CGCAACTCCTCTTGGTGGCGGATAGCCGGGGTCTCACACGCCAGCTTTTGGAGGGAATTCACGGGAAAGTaGTTGTACACTGGTTGGGAT +
Preference number: 4 (lower is better)
Translates to: RNSSWWRIAGVSHASFWREFTGK*LYTGWD
Trigger: ATCCCAACCAGTGTACAACCACTTTCCCGTGAATTC...CCTCCAAAAGCTGGCGTGTGAGACCCCGGCTATCCGCCACCAAGAGGAGTTGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CCA 90 bp CAGATCAAAGGCTGTCTAGCGTTTCCAAATCACACCCGCCCCCACTCTGTCCCAGAATCTGGGCCTGCCTaGAGAGCACTGGGGATTCTT +
Preference number: 4 (lower is better)
Translates to: QIKGCLAFPNHTRPHSVPESGPA*RALGIL
Trigger: AAGAATCCCCAGTGCTCTCCAGGCAGGCCCAGATTC...TGGGACAGAGTGGGGGCGGGTGTGATTTGGAAACGCTAGACAGCCTTTGATCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CCA 90 bp CTAGCATCCCCCAAGAGGTCCTACAACCAGGTGAGAATTGGATTCTTGATACCCGACCGCAACTCCTCTTaGTGGCGGATAGCCGGGGTC +
Preference number: 4 (lower is better)
Translates to: LASPKRSYNQVRIGFLIPDRNSS*WRIAGV
Trigger: GACCCCGGCTATCCGCCACCAAGAGGAGTTGCGGTC...GGGTATCAAGAATCCAATTCTCACCTGGTTGTAGGACCTCTTGGGGGATGCTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CCA 90 bp GCCCAAAGTTCGGGATGGTTTTGGGCAGGGGACAAGGAACATCCATCAGGGATCCAAGACACATGCGAATaGGCATGGCAGGACGGAGGA +
Preference number: 4 (lower is better)
Translates to: AQSSGWFWAGDKEHPSGIQDTCE*AWQDGG
Trigger: TCCTCCGTCCTGCCATGCCCATTCGCATGTGTCTTG...GATCCCTGATGGATGTTCCTTGTCCCCTGCCCAAAACCATCCCGAACTTTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CCA 90 bp TCGGAGACCCCTGGCCATGTTCCTCTCAGGCACCTACAGAAATCCCAGGAAGGGTCACAGGAGCGGAGATaGACAAGACACATGCGAATG +
Preference number: 4 (lower is better)
Translates to: SETPGHVPLRHLQKSQEGSQERR*TRHMRM
Trigger: CATTCGCATGTGTCTTGTCCATCTCCGCTCCTGTGA...CCCTTCCTGGGATTTCTGTAGGTGCCTGAGAGGAACATGGCCAGGGGTCTCCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CCA 90 bp TGTGAGGGCCCCAAATACTTCCTCAGCCACAGAGACTGTCCAAGCCAGAACTGTACGCGGATGACGATGTaGGGGTTGAGGCCCATAGCA +
Preference number: 4 (lower is better)
Translates to: CEGPKYFLSHRDCPSQNCTRMTM*GLRPIA
Trigger: TGCTATGGGCCTCAACCCCCACATCGTCATCCGCGT...ACAGTTCTGGCTTGGACAGTCTCTGTGGCTGAGGAAGTATTTGGGGCCCTCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CCA 90 bp CACGGGAAAGTGGTTGTACACTGGTTGGGATGTCTATATTGCTGCTGCAGTCCCGCGTCTCTGGGGTCTTaGGGCATGTCTGCAGGCACA +
Preference number: 4 (lower is better)
Translates to: HGKVVVHWLGCLYCCCSPASLGS*GMSAGT
Trigger: TGTGCCTGCAGACATGCCCCAAGACCCCAGAGACGC...GGGACTGCAGCAGCAATATAGACATCCCAACCAGTGTACAACCACTTTCCCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CCA 90 bp GTGAATTTACTCTGTCCGAGGGTGAGGAGGGGCTGCAGGTCCACCCAGATGCTTCCATACGTGGATACATaGGAAGGCTCTGTCTCCCTG +
Preference number: 4 (lower is better)
Translates to: VNLLCPRVRRGCRSTQMLPYVDT*EGSVSL
Trigger: CAGGGAGACAGAGCCTTCCCATGTATCCACGTATGG...AAGCATCTGGGTGGACCTGCAGCCCCTCCTCACCCTCGGACAGAGTAAATTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640909.2
CDS-3UTR CCA 90 bp CACCACTCAGCCCAGGCCCCTTTGCTTCAAATCGTGTCTCAGAGGGAGAACAGTCAGGGGAGCCAGCCATaGGCAGCAGAGATATTGACA +
Preference number: 4 (lower is better)
Translates to: HHSAQAPLLQIVSQRENSQGSQP*AAEILT
Trigger: TGTCAATATCTCTGCTGCCCATGGCTGGCTCCCCTG...ACTGTTCTCCCTCTGAGACACGATTTGAAGCAAAGGGGCCTGGGCTGAGTGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS-3UTR CCA 90 bp TCTGCAAGAGCAGCCTGGGGGAGTCAAGGCTCCTCCTGCATTCCTGGGTACCCCCCTCCCTCTGGCTTGTaGATTGATTATCTTTCAAGG +
Preference number: 4 (lower is better)
Translates to: SARAAWGSQGSSCIPGYPPPSGL*IDYLSR
Trigger: CCTTGAAAGATAATCAATCCACAAGCCAGAGGGAGG...GGGGTACCCAGGAATGCAGGAGGAGCCTTGACTCCCCCAGGCTGCTCTTGCAGA
56% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000638825.1
ENST00000675775.1
CDS-3UTR CCA 90 bp CAAGTCACTCTCACAGCCTCTGTCGGCATATACTTAGCAATGACAGGGCTTTCTGTGCTGACCACACCCTaGGCAGAGGCCTGTGGGTGC +
Preference number: 4 (lower is better)
Translates to: QVTLTASVGIYLAMTGLSVLTTP*AEACGC
Trigger: GCACCCACAGGCCTCTGCCCAGGGTGTGGTCAGCAC...AGAAAGCCCTGTCATTGCTAAGTATATGCCGACAGAGGCTGTGAGAGTGACTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638825.1
3UTR CAA 72 bp CCCCTCCCGGCCCCCAGTGAATTCACGGGAAAGTGGTaGTACACTGGTTGGGATGTCTATATTGCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: PLPAPSEFTGKW*YTGWDVYIAAA
Trigger: TGCAGCAGCAATATAGACATCCCAACCAGTGTACAACCACTTTCCCGTGAATTCACTGGGGGCCGGGAGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR CAA 72 bp CTCCTCAATCAGGGGAGAGGAGAGATCACTTTGCCTTaGGGACTTGACCTGCCATCTGCAAGAGCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: LLNQGRGEITLP*GLDLPSARAAW
Trigger: CCAGGCTGCTCTTGCAGATGGCAGGTCAAGTCCCAAAGGCAAAGTGATCTCTCCTCTCCCCTGATTGAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638825.1
ENST00000675775.1
CDS-3UTR TCA 90 bp ATGCAAAAGTTTCACATTTTGAGTAGCGTGATGAAATCTCATGCCATGTCACTCCTCCCGCGGCGGTGCTaGAGGGACAGCTCCCGGCGG +
Preference number: 4 (lower is better)
Translates to: MQKFHILSSVMKSHAMSLLPRRC*RDSSRR
Trigger: CCGCCGGGAGCTGTCCCTTCAGCACCGCCGCGGGAG...GAGTGACATGGCATGAGATTTCATCACGCTACTCAAAATGTGAAACTTTTGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000639325.2
ENST00000640318.2
CDS-3UTR TCA 90 bp CATTCTAGAGAGAGCCTGCAAAGTACAGATGACCATGGTATACTTGGGAATGTTATTCGCGCTCCTCTGTaGGGTGGTCGCCGCGGCGCG +
Preference number: 4 (lower is better)
Translates to: HSRESLQSTDDHGILGNVIRAPL*GGRRGA
Trigger: CGCGCCGCGGCGACCACCTCACAGAGGAGCGCGAAT...AACATTCCCAAGTATACCATGGTCATCTGTACTTTGCAGGCTCTCTCTAGAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000639325.2
ENST00000640318.2
CDS-3UTR TCA 90 bp TCTAGAGAGAGCCTGCAAAGTACAGATGACCATGGTATACTTGGGAATGTTGGGGCGTGCCGCCCACGTTaGTCACGATGCGCTCGCTCT +
Preference number: 4 (lower is better)
Translates to: SRESLQSTDDHGILGNVGACRPR*SRCARS
Trigger: AGAGCGAGCGCATCGTGATCAACGTGGGCGGCACGC...CCCAACATTCCCAAGTATACCATGGTCATCTGTACTTTGCAGGCTCTCTCTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000639325.2
ENST00000640318.2
CDS-3UTR TCA 90 bp CCATACGTGGATACATGGGAAGGCTCTGTCTCCCTGAGGAAAAACCAGATGGAGTGTTCACGATGGGGTTaGAGCGCTCGTGGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: PYVDTWEGSVSLRKNQMECSRWG*SARGSP
Trigger: TGGAGACCCACGAGCGCTTCAACCCCATCGTGAACA...CTCCATCTGGTTTTTCCTCAGGGAGACAGAGCCTTCCCATGTATCCACGTATGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000640909.2
CDS-3UTR TCA 90 bp TGCCCACACTGCAGAATAACCTTTGTCCATTCTAGAGAGAGCCTGCAAAGTACAGGCCCTCATCGGGAGTaGGGGCCTGGTCTATGTGGG +
Preference number: 4 (lower is better)
Translates to: CPHCRITFVHSRESLQSTGPHRE*GPGLCG
Trigger: CCCACATAGACCAGGCCCTCACTCCCGATGAGGGCC...TGTACTTTGCAGGCTCTCTCTAGAATGGACAAAGGTTATTCTGCAGTGTGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000639325.2
ENST00000640318.2
CDS-3UTR TCA 90 bp TTTCTCATTCCTCCACCAGGTGGGCACGCGTACTCCCCGGTTGATAAGAGGAAGCAAACCTGCATGGCGTaGATTTACTCTGTCCGAGGG +
Preference number: 4 (lower is better)
Translates to: FLIPPPGGHAYSPVDKRKQTCMA*IYSVRG
Trigger: CCCTCGGACAGAGTAAATTCACGCCATGCAGGTTTG...CTTCCTCTTATCAACCGGGGAGTACGCGTGCCCACCTGGTGGAGGAATGAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638366.1
CDS-3UTR TCA 90 bp CTGGGCCACTCGGACTCGTCCGGCAAACCTGCATGGCGTGAATTTACTCTGTCCTGTACAGGTTTCTACTaGACGCCGTTACAGTTTGGC +
Preference number: 4 (lower is better)
Translates to: LGHSDSSGKPAWREFTLSCTGFY*TPLQFG
Trigger: GCCAAACTGTAACGGCGTTCAGTAGAAACCTGTACA...GGACAGAGTAAATTCACGCCATGCAGGTTTGCCGGACGAGTCCGAGTGGCCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000638825.1
CDS-3UTR TCA 90 bp CAGACACACAGACTGAGGCTTCAGACGAGACCAAGAGGTGGAGGTGAGGGGCAGACTAAGGAAGCAGTCTaGCTGGATCTGGAATCATCG +
Preference number: 4 (lower is better)
Translates to: QTHRLRLQTRPRGGGEGQTKEAV*LDLESS
Trigger: CGATGATTCCAGATCCAGTCAGACTGCTTCCTTAGT...CTGCCCCTCACCTCCACCTCTTGGTCTCGTCTGAAGCCTCAGTCTGTGTGTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR GCA 90 bp TCTACAGTTTCTGTTACCTGCAGTCAGCCACAGTCCGAAAATACTCAATGGAAATGGCTCCGGTGCCTCTaGGCCCCGCACTCCGCTCCT +
Preference number: 4 (lower is better)
Translates to: STVSVTCSQPQSENTQWKWLRCL*APHSAP
Trigger: AGGAGCGGAGTGCGGGGCGCAGAGGCACCGGAGCCA...TTTCCATTGAGTATTTTCGGACTGTGGCTGACTGCAGGTAACAGAAACTGTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000639325.2
ENST00000640318.2
CDS-3UTR GCA 90 bp AAGTTTCACATTTTGAGTAGCGTGATGAAATCTCATGCCATGTCACTCCATCCCTGGCTCCGGTGCCTCTaGGCCCCGCACTCCGCTCCT +
Preference number: 4 (lower is better)
Translates to: KFHILSSVMKSHAMSLHPWLRCL*APHSAP
Trigger: AGGAGCGGAGTGCGGGGCGCAGAGGCACCGGAGCCA...GGGATGGAGTGACATGGCATGAGATTTCATCACGCTACTCAAAATGTGAAACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000639325.2
ENST00000640318.2
CDS-3UTR GCA 90 bp ATTCAAGTCTTAGAAGGGGCAGTGATATGTTTCAGTTGTGAGCCAGCCAGAGGATGGCTGGGTTTGATTTaGGGGGCCGGCGGGCACTGG +
Preference number: 4 (lower is better)
Translates to: IQVLEGAVICFSCEPARGWLGLI*GAGGHW
Trigger: CCAGTGCCCGCCGGCCCCGCAAATCAAACCCAGCCA...TCCTCTGGCTGGCTCACAACTGAAACATATCACTGCCCCTTCTAAGACTTGAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000639325.2
ENST00000640318.2
CDS-3UTR GCA 90 bp AAGTTTCACATTTTGAGTAGCGTGATGAAATCTCATGCCATGTCACTCCATCCCGGGGTTCCGCTGGGCTaGGCTCGGACTTGGGCTCCC +
Preference number: 4 (lower is better)
Translates to: KFHILSSVMKSHAMSLHPGVPLG*ARTWAP
Trigger: GGGAGCCCAAGTCCGAGCGCAGCCCAGCGGAACCCC...GGGATGGAGTGACATGGCATGAGATTTCATCACGCTACTCAAAATGTGAAACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000639325.2
ENST00000640318.2
CDS-3UTR GCA 90 bp AGCCGTGCGAGTTTCCACAATTCTATTTGGAGCAAAGTTCTCAGTTTCCACGTGCGGTCCAGGGGAATGTaGGCGGGATCCCAGGGGTCT +
Preference number: 4 (lower is better)
Translates to: SRASFHNSIWSKVLSFHVRSRGM*AGSQGS
Trigger: AGACCCCTGGGATCCCGCGCACATTCCCCTGGACCG...CACGTGGAAACTGAGAACTTTGCTCCAAATAGAATTGTGGAAACTCGCACGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265969.8
CDS-3UTR GCA 90 bp ATTCAAGTCTTAGAAGGGGCAGTGATATGTTTCAGTTGTGAGCCAGCCAGAGGAGGGCGCTTTGTCGGGTaGCGGTCCAGGGGAATGTGC +
Preference number: 4 (lower is better)
Translates to: IQVLEGAVICFSCEPARGGRFVG*RSRGMC
Trigger: GCACATTCCCCTGGACCGGCACCCGACAAAGCGCCC...TCCTCTGGCTGGCTCACAACTGAAACATATCACTGCCCCTTCTAAGACTTGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000639325.2
ENST00000640318.2
CDS-3UTR GCA 90 bp CAAGGACAATGGCCTTACCCCCAAGCCCTGAAGACATCTCTCTCTTCTTGCCTCGCACTTGCGTGCCATTaGGAACGTTCTCGATCTCCG +
Preference number: 4 (lower is better)
Translates to: QGQWPYPQALKTSLSSCLALACH*ERSRSP
Trigger: CGGAGATCGAGAACGTTCGCAATGGCACGCAAGTGC...GAGGCAAGAAGAGAGAGATGTCTTCAGGGCTTGGGGGTAAGGCCATTGTCCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675775.1
CDS-3UTR GCA 90 bp GTGGGGATGTGGTTTTCAGTATCTTGCATTACAGGACCACATCTGTGCCCACACGGGGTCATTGGGCTGTaGCCCTATCCTCTCGGCGTA +
Preference number: 4 (lower is better)
Translates to: VGMWFSVSCITGPHLCPHGVIGL*PYPLGV
Trigger: TACGCCGAGAGGATAGGGGCACAGCCCAATGACCCC...GTGTGGGCACAGATGTGGTCCTGTAATGCAAGATACTGAAAACCACATCCCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000639325.2
ENST00000640318.2
CDS-3UTR GCA 90 bp AGGATGCCTCTTCCATGCCAAGAACACGGATCTTGTGTAGCTAAGTTCACAGGGGGGGTCATTGGGCTGTaGCCCTATCCTCTCGGCGTA +
Preference number: 4 (lower is better)
Translates to: RMPLPCQEHGSCVAKFTGGVIGL*PYPLGV
Trigger: TACGCCGAGAGGATAGGGGCACAGCCCAATGACCCC...CCCTGTGAACTTAGCTACACAAGATCCGTGTTCTTGGCATGGAAGAGGCATCCT
54% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000675775.1
CDS-3UTR GCA 90 bp GAGTCCTCAATAGGAACTCCATACGTGGATACATGGGAAGGCTCTGTCTCCCTGTCCGTCCTAGTACAATaGCTGGGCCACTCGGACTCG +
Preference number: 4 (lower is better)
Translates to: ESSIGTPYVDTWEGSVSLSVLVQ*LGHSDS
Trigger: CGAGTCCGAGTGGCCCAGGCATTGTACTAGGACGGA...CAGGGAGACAGAGCCTTCCCATGTATCCACGTATGGAGTTCCTATTGAGGACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640909.2
CDS-3UTR GCA 90 bp CGGACTCGTCCGGCAAACCTGCATGGCGTGAATTTACTCTGTCCGAGGGTGAGGGGAAGAAGGCAGCCGTaGGAGTTTCCACAATTCTAT +
Preference number: 4 (lower is better)
Translates to: RTRPANLHGVNLLCPRVRGRRQP*EFPQFY
Trigger: ATAGAATTGTGGAAACTCGCACGGCTGCCTTCTTCC...CCTCACCCTCGGACAGAGTAAATTCACGCCATGCAGGTTTGCCGGACGAGTCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000638825.1
CDS-3UTR GCA 90 bp CTCTCAGGCACCTACAGAAATCCCAGGAAGGGAAGGGTATGCGGCAGGGTGAAACCCATGCACCATCTCTaGCATCTACACAGCCTGAAG +
Preference number: 4 (lower is better)
Translates to: LSGTYRNPRKGRVCGRVKPMHHL*HLHSLK
Trigger: CTTCAGGCTGTGTAGATGGCAGAGATGGTGCATGGG...TTTCACCCTGCCGCATACCCTTCCCTTCCTGGGATTTCTGTAGGTGCCTGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR GCA 90 bp AGACTAAATGCCACCTGTCACGTCAACCTCCTGCTCACCTGGCACTCCTTCTTACCTTCTCTCTGCCTCTaGCTCTGTGGAGATGGTGCC +
Preference number: 4 (lower is better)
Translates to: RLNATCHVNLLLTWHSFLPSLCL*LCGDGA
Trigger: GGCACCATCTCCACAGAGGCAGAGGCAGAGAGAAGG...TAAGAAGGAGTGCCAGGTGAGCAGGAGGTTGACGTGACAGGTGGCATTTAGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR GCA 90 bp CTCTCAGGCACCTACAGAAATCCCAGGAAGGGAAGGGTATGCGGCAGGGTGAAAAGGCCCATAGCACCCTaGATGGATTTTCCTCAAGGG +
Preference number: 4 (lower is better)
Translates to: LSGTYRNPRKGRVCGRVKRPIAP*MDFPQG
Trigger: CCCTTGAGGAAAATCCATGCAGGGTGCTATGGGCCT...TTTCACCCTGCCGCATACCCTTCCCTTCCTGGGATTTCTGTAGGTGCCTGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR GCA 90 bp GTCCTCAGCAACCTGGCGGGCCGCGTTGTCTCTTCAGAACATCACGAGACCAACACCAAAAAGGCCAGTTaGCAAGGTAACTCTGACACC +
Preference number: 4 (lower is better)
Translates to: VLSNLAGRVVSSEHHETNTKKAS*QGNSDT
Trigger: GGTGTCAGAGTTACCTTGGCAACTGGCCTTTTTGGT...GTTGGTCTCGTGATGTTCTGAAGAGACAACGCGGCCCGCCAGGTTGCTGAGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR GCA 90 bp CCCAGGGGCACCAGTGAGGTTCCTCTAGCAGGCTCTTGCCTGCTGAATTTGGCCGCATTTCACGTACAGTaGGTTTCTCGACAAATCCCA +
Preference number: 4 (lower is better)
Translates to: PRGTSEVPLAGSCLLNLAAFHVQ*VSRQIP
Trigger: TGGGATTTGTCGAGAAACGCACTGTACGTGAAATGC...GGCCAAATTCAGCAGGCAAGAGCCTGCTAGAGGAACCTCACTGGTGCCCCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR GCA 90 bp CTGGCTTGTGGATTGATTATCTTTCAAGGATGCCTCTTCCATGCCAAGAACACGAGGCGGCCCGGACGATaGACGGTGCTCCAGCTTCCT +
Preference number: 4 (lower is better)
Translates to: LACGLIIFQGCLFHAKNTRRPGR*TVLQLP
Trigger: AGGAAGCTGGAGCACCGTGCATCGTCCGGGCCGCCT...CGTGTTCTTGGCATGGAAGAGGCATCCTTGAAAGATAATCAATCCACAAGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638825.1
ENST00000675775.1
CDS-3UTR GCA 90 bp GCCCTCCTCAATCAGGGGAGAGGAGAGATCACTTTGCCTTTGGGACTTGACCTGCTTTGGGACTTGACCTaGCATCTGCAAGAGCAGCCT +
Preference number: 4 (lower is better)
Translates to: ALLNQGRGEITLPLGLDLLWDLT*HLQEQP
Trigger: AGGCTGCTCTTGCAGATGGCAGGTCAAGTCCCAAAG...CAGGTCAAGTCCCAAAGGCAAAGTGATCTCTCCTCTCCCCTGATTGAGGAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638825.1
ENST00000675775.1
CDS-3UTR CCA 90 bp ATATTTATTCGAGATGCAGAAGTGTGTCTCTGCAAACCTCCGACTGCTTCAGGAGAGCTGGGGTTCCGCTaGGCTGCGCTCGGACTTGGG +
Preference number: 4 (lower is better)
Translates to: IFIRDAEVCLCKPPTASGELGFR*AALGLG
Trigger: CCCAAGTCCGAGCGCAGCCCAGCGGAACCCCAGCTC...TCCTGAAGCAGTCGGAGGTTTGCAGAGACACACTTCTGCATCTCGAATAAATAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265969.8
CDS-3UTR CCA 90 bp AATATTCAAGTCTTAGAAGGGGCAGTGATATGTTTCAGTTGTGAGCCAGCCAGACGCTCCTCTGTGAGGTaGTCGCCGCGGCGCGCTCTC +
Preference number: 4 (lower is better)
Translates to: NIQVLEGAVICFSCEPARRSSVR*SPRRAL
Trigger: GAGAGCGCGCCGCGGCGACCACCTCACAGAGGAGCG...TCTGGCTGGCTCACAACTGAAACATATCACTGCCCCTTCTAAGACTTGAATATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000639325.2
ENST00000640318.2
CDS-3UTR CCA 90 bp GACCCCTGGCCATGTTCCTCTCAGGCACCTACAGAAATCCCAGGAAGGGAAGGGATCTCCGCGGGAAAATaGAGAAATCGGCACAAAGCT +
Preference number: 4 (lower is better)
Translates to: DPWPCSSQAPTEIPGREGISAGK*RNRHKA
Trigger: AGCTTTGTGCCGATTTCTCCATTTTCCCGCGGAGAT...CCCTTCCCTTCCTGGGATTTCTGTAGGTGCCTGAGAGGAACATGGCCAGGGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CCA 90 bp TCTCAGAGGGAGAACAGTAGTTCCCCTTATCTGCAGTTGCACTTTCTACAGTTTAGAGGCCTGCGGCTCTaGCCACCCCAACGAGCGAGC +
Preference number: 4 (lower is better)
Translates to: SQRENSSSPYLQLHFLQFRGLRL*PPQRAS
Trigger: GCTCGCTCGTTGGGGTGGCCAGAGCCGCAGGCCTCT...AAACTGTAGAAAGTGCAACTGCAGATAAGGGGAACTACTGTTCTCCCTCTGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000639325.2
ENST00000640318.2
CDS-3UTR CCA 90 bp GAGAACAGTAGTTCCCCTTATCTGCAGTTGCACTTTCTACAGTTTCTGTTACCTTCGCTCTCGTCCCCTTaGCCCATCGCGGCGCCCCCT +
Preference number: 4 (lower is better)
Translates to: ENSSSPYLQLHFLQFLLPSLSSP*PIAAPP
Trigger: AGGGGGCGCCGCGATGGGCCAAGGGGACGAGAGCGA...AGGTAACAGAAACTGTAGAAAGTGCAACTGCAGATAAGGGGAACTACTGTTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000639325.2
ENST00000640318.2
CDS-3UTR CCA 90 bp TCCATACGTGGATACATGGGAAGGCTCTGTCTCCCTGAGGAAAAACCAGATGGAAGTGCGTGTGCTCACTaGCGCTGGGGTCATTGGGCT +
Preference number: 4 (lower is better)
Translates to: SIRGYMGRLCLPEEKPDGSACAH*RWGHWA
Trigger: AGCCCAATGACCCCAGCGCCAGTGAGCACACGCACT...TCCATCTGGTTTTTCCTCAGGGAGACAGAGCCTTCCCATGTATCCACGTATGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000640909.2
CDS-3UTR CCA 90 bp AGGATGCCTCTTCCATGCCAAGAACACGGATCTTGTGTAGCTAAGTTCACAGGGAGGGCCTGGTCTATGTaGGGGCAGTCTTCGTTCGCC +
Preference number: 4 (lower is better)
Translates to: RMPLPCQEHGSCVAKFTGRAWSM*GQSSFA
Trigger: GGCGAACGAAGACTGCCCCCACATAGACCAGGCCCT...CCCTGTGAACTTAGCTACACAAGATCCGTGTTCTTGGCATGGAAGAGGCATCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638825.1
ENST00000675775.1
CDS-3UTR CCA 90 bp TCGGACTCGTCCGGCAAACCTGCATGGCGTGAATTTACTCTGTCCGAGGGTGAGGGGGGTTGGTGGGTTTaGTTTGCTGGGTTTTCTGTT +
Preference number: 4 (lower is better)
Translates to: SDSSGKPAWREFTLSEGEGGWWV*FAGFSV
Trigger: AACAGAAAACCCAGCAAACCAAACCCACCAACCCCC...CTCACCCTCGGACAGAGTAAATTCACGCCATGCAGGTTTGCCGGACGAGTCCGA
54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000638825.1
CDS-3UTR CCA 90 bp GACCCCTGGCCATGTTCCTCTCAGGCACCTACAGAAATCCCAGGAAGGGAAGGGGTCGATGGTATTCCATaGGTAGAGGTAGACTATGGG +
Preference number: 4 (lower is better)
Translates to: DPWPCSSQAPTEIPGREGVDGIP*VEVDYG
Trigger: CCCATAGTCTACCTCTACCCATGGAATACCATCGAC...CCCTTCCCTTCCTGGGATTTCTGTAGGTGCCTGAGAGGAACATGGCCAGGGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CCA 90 bp CCCAGGGGCACCAGTGAGGTTCCTCTAGCAGGCTCTTGCCTGCTGAATTTGGCCTCCCACAGGAGTGCATaGGTTTTACAGGTTTTGTGT +
Preference number: 4 (lower is better)
Translates to: PRGTSEVPLAGSCLLNLASHRSA*VLQVLC
Trigger: ACACAAAACCTGTAAAACCCATGCACTCCTGTGGGA...GGCCAAATTCAGCAGGCAAGAGCCTGCTAGAGGAACCTCACTGGTGCCCCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CCA 90 bp ACAGCTGGCTTTTCTGCCCTGGTCTCCAGGCACCGCCAAAGTACTTACTGTTCAGAGGGAGCCCCTTTCTaGGAGAGAAGTAGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: TAGFSALVSRHRQSTYCSEGAPF*ERSSFS
Trigger: GGAGAAGCTACTTCTCTCCCAGAAAGGGGCTCCCTC...TGAACAGTAAGTACTTTGGCGGTGCCTGGAGACCAGGGCAGAAAAGCCAGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CCA 90 bp GTCCTCAGCAACCTGGCGGGCCGCGTTGTCTCTTCAGAACATCACGAGACCAACAAGTCTCAGGCTAAATaGGGACAGTCTGTGAGACAC +
Preference number: 4 (lower is better)
Translates to: VLSNLAGRVVSSEHHETNKSQAK*GQSVRH
Trigger: GTGTCTCACAGACTGTCCCCATTTAGCCTGAGACTT...GTTGGTCTCGTGATGTTCTGAAGAGACAACGCGGCCCGCCAGGTTGCTGAGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CCA 90 bp AGCCACAGCACACAGGAGGAGACCAGATTGTCCCTGGGACAGACACACAGACTGGCAGCGTCTCAGAGATaGTTTCCAGGCTTGAAATGG +
Preference number: 4 (lower is better)
Translates to: SHSTQEETRLSLGQTHRLAASQR*FPGLKW
Trigger: CCATTTCAAGCCTGGAAACCATCTCTGAGACGCTGC...CAGTCTGTGTGTCTGTCCCAGGGACAATCTGGTCTCCTCCTGTGTGCTGTGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CCA 90 bp CTAGCATCCCCCAAGAGGTCCTACAACCAGGTGAGAATTGGATTCTTGATACCCGGAGGGATGATAGCCTaGCACCTTTCCCTCCTGGGG +
Preference number: 4 (lower is better)
Translates to: LASPKRSYNQVRIGFLIPGGMIA*HLSLLG
Trigger: CCCCAGGAGGGAAAGGTGCCAGGCTATCATCCCTCC...GGGTATCAAGAATCCAATTCTCACCTGGTTGTAGGACCTCTTGGGGGATGCTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CCA 90 bp GTCAAGGCTCCTCCTGCATTCCTGGGTACCCCTGCCTTGGGGTCATGGCCTAAAAGATCACTTTGCCTTTaGGACTTGACCTGCCATCTG +
Preference number: 4 (lower is better)
Translates to: VKAPPAFLGTPALGSWPKRSLCL*DLTCHL
Trigger: CAGATGGCAGGTCAAGTCCCAAAGGCAAAGTGATCT...TTTAGGCCATGACCCCAAGGCAGGGGTACCCAGGAATGCAGGAGGAGCCTTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000638825.1
ENST00000675775.1
CDS-3UTR CCA 90 bp GTGAATTTACTCTGTCCGAGGGTGAGGAGGGGCTGCAGGTCCACCCAGATGCTTGTCTTGTCTGCTCTTTaGGGCCACACCAATCAGTCT +
Preference number: 4 (lower is better)
Translates to: VNLLCPRVRRGCRSTQMLVLSAL*GHTNQS
Trigger: AGACTGATTGGTGTGGCCCCAAAGAGCAGACAAGAC...AAGCATCTGGGTGGACCTGCAGCCCCTCCTCACCCTCGGACAGAGTAAATTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638825.1
CDS-3UTR CCA 90 bp TCGGACTCGTCCGGCAAACCTGCATGGCGTGAATTTACTCTGTCCGAGGGTGAGCACCTGCATGCCTTCTaGCTCAGAATTAGCCTGAGA +
Preference number: 4 (lower is better)
Translates to: SDSSGKPAWREFTLSEGEHLHAF*LRISLR
Trigger: TCTCAGGCTAATTCTGAGCCAGAAGGCATGCAGGTG...CTCACCCTCGGACAGAGTAAATTCACGCCATGCAGGTTTGCCGGACGAGTCCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638825.1
CDS-3UTR CCA 90 bp CTGCAAGGACAATGGCCTTACCCCCAAGCCCTGAAGACATCTCTCTCTTCTTGCTCCCTCCTGGGGGAATaGGATGAGTCCCTACTTCTG +
Preference number: 4 (lower is better)
Translates to: LQGQWPYPQALKTSLSSCSLLGE*DESLLL
Trigger: CAGAAGTAGGGACTCATCCCATTCCCCCAGGAGGGA...GCAAGAAGAGAGAGATGTCTTCAGGGCTTGGGGGTAAGGCCATTGTCCTTGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000638825.1
3UTR CAA 72 bp CGGGAAAGTGGTTGTACACTGGTTGGGATGTCTATATaGCTGCTGCAGTCCCTACCGCTGGAAACGGGGAGA +
Preference number: 4 (lower is better)
Translates to: RESGCTLVGMSI*LLQSLPLETGR
Trigger: TCTCCCCGTTTCCAGCGGTAGGGACTGCAGCAGCAATATAGACATCCCAACCAGTGTACAACCACTTTCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR CAA 72 bp AACAGTATGGAGAGGACGCGGATGACGATGTGGGGGTaGAGGCCCATAGCACCCTGCATGGATTTTCCTCAA +
Preference number: 4 (lower is better)
Translates to: NSMERTRMTMWG*RPIAPCMDFPQ
Trigger: TTGAGGAAAATCCATGCAGGGTGCTATGGGCCTCAACCCCCACATCGTCATCCGCGTCCTCTCCATACTGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR CAA 72 bp GGAAGGGGCAGGACCGTCCTGCTCAACCACCTTCTCTaGGCAAGTTCTCGATCTGCCACTAGCAATATTCTG +
Preference number: 4 (lower is better)
Translates to: GRGRTVLLNHLL*ASSRSATSNIL
Trigger: CAGAATATTGCTAGTGGCAGATCGAGAACTTGCCAAGAGAAGGTGGTTGAGCAGGACGGTCCTGCCCCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638825.1
CDS-3UTR TCA 90 bp AAGTTTCACATTTTGAGTAGCGTGATGAAATCTCATGCCATGTCACTCCATCCCTCTCCTGGCTGGGTTTaGTTTGCGGGGCCGGCGGGC +
Preference number: 4 (lower is better)
Translates to: KFHILSSVMKSHAMSLHPSPGWV*FAGPAG
Trigger: GCCCGCCGGCCCCGCAAATCAAACCCAGCCAGGAGA...GGGATGGAGTGACATGGCATGAGATTTCATCACGCTACTCAAAATGTGAAACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000639325.2
ENST00000640318.2
CDS-3UTR TCA 90 bp CCAGAGCCCCATGATCAACTTTATGTGCTATGTGCAGGTTCTCATAAAACTGAGGCGTGCCGCCCACGTTaGTCACGATGCGCTCGCTCT +
Preference number: 4 (lower is better)
Translates to: PEPHDQLYVLCAGSHKTEACRPR*SRCARS
Trigger: AGAGCGAGCGCATCGTGATCAACGTGGGCGGCACGC...CTCAGTTTTATGAGAACCTGCACATAGCACATAAAGTTGATCATGGGGCTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR TCA 90 bp CCAGAGCCCCATGATCAACTTTATGTGCTATGTGCAGGTTCTCATAAAACTGAGCATCCGGGGAGTCACTaGGCGCCAGGCGCTTGGTCA +
Preference number: 4 (lower is better)
Translates to: PEPHDQLYVLCAGSHKTEHPGSH*APGAWS
Trigger: TGACCAAGCGCCTGGCGCTCAGTGACTCCCCGGATG...CTCAGTTTTATGAGAACCTGCACATAGCACATAAAGTTGATCATGGGGCTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR TCA 90 bp TCTCAGAGGGAGAACAGTAGTTCCCCTTATCTGCAGTTGCACTTTCTACAGTTTCATCCGGGGAGTCACTaGGCGCCAGGCGCTTGGTCA +
Preference number: 4 (lower is better)
Translates to: SQRENSSSPYLQLHFLQFHPGSH*APGAWS
Trigger: TGACCAAGCGCCTGGCGCTCAGTGACTCCCCGGATG...AAACTGTAGAAAGTGCAACTGCAGATAAGGGGAACTACTGTTCTCCCTCTGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000639325.2
ENST00000640318.2
CDS-3UTR TCA 90 bp TCTCAGAGGGAGAACAGTAGTTCCCCTTATCTGCAGTTGCACTTTCTACAGTTTGGCCCTCATCGGGAGTaGGGGCCTGGTCTATGTGGG +
Preference number: 4 (lower is better)
Translates to: SQRENSSSPYLQLHFLQFGPHRE*GPGLCG
Trigger: CCCACATAGACCAGGCCCTCACTCCCGATGAGGGCC...AAACTGTAGAAAGTGCAACTGCAGATAAGGGGAACTACTGTTCTCCCTCTGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000639325.2
ENST00000640318.2
CDS-3UTR TCA 90 bp ATGCTTAATAGCCACCAGTGTCCTCGGCCAAGCCGCCTGGTCAAGTCACTCTCAGGTCAATATGACCGATaGCTGACCGACTGCCCTTTT +
Preference number: 4 (lower is better)
Translates to: MLNSHQCPRPSRLVKSLSGQYDR*LTDCPF
Trigger: AAAAGGGCAGTCGGTCAGTCATCGGTCATATTGACC...TGAGAGTGACTTGACCAGGCGGCTTGGCCGAGGACACTGGTGGCTATTAAGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638825.1
CDS-3UTR TCA 90 bp CACCTCCAACTGGGAAAAAGCCAGTCGCAAAGGGGAACATCAGGCCCATCCATGAAGGTGAGGTCAATATaGCCGATGACTGACCGACTG +
Preference number: 4 (lower is better)
Translates to: HLQLGKSQSQRGTSGPSMKVRSI*PMTDRL
Trigger: CAGTCGGTCAGTCATCGGTCATATTGACCTCACCTT...CATGGATGGGCCTGATGTTCCCCTTTGCGACTGGCTTTTTCCCAGTTGGAGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638825.1
CDS-3UTR TCA 90 bp GGCAAACCTGCATGGCGTGAATTTACTCTGTCCGAGGGTGAGGAGGGGCTGCAGTTTCCACGTGAGAGATaGACTATGAAGGTGAGGTCA +
Preference number: 4 (lower is better)
Translates to: GKPAWREFTLSEGEEGLQFPRER*TMKVRS
Trigger: TGACCTCACCTTCATAGTTCATCTCTCACGTGGAAA...CTGCAGCCCCTCCTCACCCTCGGACAGAGTAAATTCACGCCATGCAGGTTTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000638825.1
CDS-3UTR TCA 90 bp CCCAGGGGCACCAGTGAGGTTCCTCTAGCAGGCTCTTGCCTGCTGAATTTGGCCGAATATATCCCACGGTaGCTAGTATTGTTTCATGCC +
Preference number: 4 (lower is better)
Translates to: PRGTSEVPLAGSCLLNLAEYIPR*LVLFHA
Trigger: GGCATGAAACAATACTAGTCACCGTGGGATATATTC...GGCCAAATTCAGCAGGCAAGAGCCTGCTAGAGGAACCTCACTGGTGCCCCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR TCA 90 bp GCCCAAAGTTCGGGATGGTTTTGGGCAGGGGACAAGGAACATCCATCAGGGATCCGGACCAGAGCCCCATaGTCAACTTTATGTGCTATG +
Preference number: 4 (lower is better)
Translates to: AQSSGWFWAGDKEHPSGIRTRAP*STLCAM
Trigger: CATAGCACATAAAGTTGATCATGGGGCTCTGGTCCG...GATCCCTGATGGATGTTCCTTGTCCCCTGCCCAAAACCATCCCGAACTTTGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR TCA 90 bp CACGGGAAAGTGGTTGTACACTGGTTGGGATGTCTATATTGCTGCTGCAGTCCCCAGAGGGCAAGCTTGTaGGGGCCCCAAATACTTCCT +
Preference number: 4 (lower is better)
Translates to: HGKVVVHWLGCLYCCCSPQRASL*GPQILP
Trigger: AGGAAGTATTTGGGGCCCTCACAAGCTTGCCCTCTG...GGGACTGCAGCAGCAATATAGACATCCCAACCAGTGTACAACCACTTTCCCGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR TCA 90 bp ACAGCTGGCTTTTCTGCCCTGGTCTCCAGGCACCGCCAAAGTACTTACTGTTCAAATGGGGACAGTCTGTaGGACACGAGCAGGGAACAA +
Preference number: 4 (lower is better)
Translates to: TAGFSALVSRHRQSTYCSNGDSL*DTSREQ
Trigger: TTGTTCCCTGCTCGTGTCTCACAGACTGTCCCCATT...TGAACAGTAAGTACTTTGGCGGTGCCTGGAGACCAGGGCAGAAAAGCCAGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR TCA 90 bp TGCCAAAAGGCTCCAGCTGCAGCCTGTCTCCATGAAGGCATAGAAGGGGACCATAAGGCTCTGTCTCCCTaGGGAAAAACCAGATGGAGT +
Preference number: 4 (lower is better)
Translates to: CQKAPAAACLHEGIEGDHKALSP*GKTRWS
Trigger: ACTCCATCTGGTTTTTCCTCAGGGAGACAGAGCCTT...ATGGTCCCCTTCTATGCCTTCATGGAGACAGGCTGCAGCTGGAGCCTTTTGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS-3UTR TCA 90 bp TGCCAAAAGGCTCCAGCTGCAGCCTGTCTCCATGAAGGCATAGAAGGGGACCATGGGCAGCAGAGATATTaGCAGAGGGTAAAGGATGAG +
Preference number: 4 (lower is better)
Translates to: CQKAPAAACLHEGIEGDHGQQRY*QRVKDE
Trigger: CTCATCCTTTACCCTCTGTCAATATCTCTGCTGCCC...ATGGTCCCCTTCTATGCCTTCATGGAGACAGGCTGCAGCTGGAGCCTTTTGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS-3UTR TCA 90 bp CAGAGGACCTGCCCAGGCAGACTAAGAAAGCAGATCTCCCACCACTCAGCCCAGGTAAGTCTTGGGTATTaGCTGAGTCAGCTTGCACTA +
Preference number: 4 (lower is better)
Translates to: QRTCPGRLRKQISHHSAQVSLGY*LSQLAL
Trigger: TAGTGCAAGCTGACTCAGTCAATACCCAAGACTTAC...CTGGGCTGAGTGGTGGGAGATCTGCTTTCTTAGTCTGCCTGGGCAGGTCCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS-3UTR GCA 90 bp TCTACAGTTTCTGTTACCTGCAGTCAGCCACAGTCCGAAAATACTCAATGGAAACGCGGGGGAGATGGATaGCGCCTGCCTTCCTCCCTG +
Preference number: 4 (lower is better)
Translates to: STVSVTCSQPQSENTQWKRGGDG*RLPSSL
Trigger: CAGGGAGGAAGGCAGGCGGCATCCATCTCCCCCGCG...TTTCCATTGAGTATTTTCGGACTGTGGCTGACTGCAGGTAACAGAAACTGTAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000639325.2
ENST00000640318.2
CDS-3UTR GCA 90 bp CTGGCTTGTGGATTGATTATCTTTCAAGGATGCCTCTTCCATGCCAAGAACACGCAGCACGTCCTTGGCTaGCTTGGAGGACAGGCCGCT +
Preference number: 4 (lower is better)
Translates to: LACGLIIFQGCLFHAKNTQHVLG*LGGQAA
Trigger: AGCGGCCTGTCCTCCAAGGCAGCCAAGGACGTGCTG...CGTGTTCTTGGCATGGAAGAGGCATCCTTGAAAGATAATCAATCCACAAGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675775.1
CDS-3UTR GCA 90 bp CCATGCCAAGAACACGGATCTTGTGTAGCTAAGTTCACAGGGTCCTGGCCCACTGGGATGTTCTTAAAGTaGGTGTGCTCACTGGCGCTG +
Preference number: 4 (lower is better)
Translates to: PCQEHGSCVAKFTGSWPTGMFLK*VCSLAL
Trigger: CAGCGCCAGTGAGCACACGCACTTTAAGAACATCCC...AGTGGGCCAGGACCCTGTGAACTTAGCTACACAAGATCCGTGTTCTTGGCATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675775.1
CDS-3UTR GCA 90 bp GAGAGCCTGCAAAGTACAGATGACCATGGTATACTTGGGAATGTTGGGTTTATAGAGCCCCCACCAGCATaGCGGACCACGTCTGCGGGT +
Preference number: 4 (lower is better)
Translates to: ESLQSTDDHGILGNVGFIEPPPA*RTTSAG
Trigger: ACCCGCAGACGTGGTCCGGCATGCTGGTGGGGGCTC...TATAAACCCAACATTCCCAAGTATACCATGGTCATCTGTACTTTGCAGGCTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS-3UTR GCA 90 bp AGAAAAAGCTACGTCCGTCCTAGTACAATGCCTGGGCCACTCGGACTCGTCCGGGGAAGAAGGCAGCCGTaGGAGTTTCCACAATTCTAT +
Preference number: 4 (lower is better)
Translates to: RKSYVRPSTMPGPLGLVRGRRQP*EFPQFY
Trigger: ATAGAATTGTGGAAACTCGCACGGCTGCCTTCTTCC...CCGGACGAGTCCGAGTGGCCCAGGCATTGTACTAGGACGGACGTAGCTTTTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000638825.1
CDS-3UTR GCA 90 bp TGCAGGTCCACCCAGATGCTTAATAGCCACCAGTGTCCTCGGCCAAGCCGCCTGATGCTAGAATCGCTTTaGATAACATTGGGCATGCAG +
Preference number: 4 (lower is better)
Translates to: CRSTQMLNSHQCPRPSRLMLESL*ITLGMQ
Trigger: CTGCATGCCCAATGTTATGCAAAGCGATTCTAGCAT...CAGGCGGCTTGGCCGAGGACACTGGTGGCTATTAAGCATCTGGGTGGACCTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265969.8
CDS-3UTR GCA 90 bp CTAGCATCCCCCAAGAGGTCCTACAACCAGGTGAGAATTGGATTCTTGATACCCGGGGGTGAGAACCCTTaGACCTGCCTTTGCAAGGGA +
Preference number: 4 (lower is better)
Translates to: LASPKRSYNQVRIGFLIPGGENP*TCLCKG
Trigger: TCCCTTGCAAAGGCAGGTGCAAGGGTTCTCACCCCC...GGGTATCAAGAATCCAATTCTCACCTGGTTGTAGGACCTCTTGGGGGATGCTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR GCA 90 bp CAGATCAAAGGCTGTCTAGCGTTTCCAAATCACACCCGCCCCCACTCTGTCCCACTATGCCCATCTAGGTaGATGGCTGCAAGCAGGAAA +
Preference number: 4 (lower is better)
Translates to: QIKGCLAFPNHTRPHSVPLCPSR*MAASRK
Trigger: TTTCCTGCTTGCAGCCATGCACCTAGATGGGCATAG...TGGGACAGAGTGGGGGCGGGTGTGATTTGGAAACGCTAGACAGCCTTTGATCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR GCA 90 bp CTAGCATCCCCCAAGAGGTCCTACAACCAGGTGAGAATTGGATTCTTGATACCCCCTCAGAACCCAGCGTaGCACACACAGCCCCTAACT +
Preference number: 4 (lower is better)
Translates to: LASPKRSYNQVRIGFLIPPQNPA*HTQPLT
Trigger: AGTTAGGGGCTGTGTGTGGCACGCTGGGTTCTGAGG...GGGTATCAAGAATCCAATTCTCACCTGGTTGTAGGACCTCTTGGGGGATGCTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR GCA 90 bp GCCCTCCTCAATCAGGGGAGAGGAGAGATCACTTTGCCTTTGGGACTTGACCTGGAGGAGAGATCACTTTaGCTTTGGGACTTGACCTGC +
Preference number: 4 (lower is better)
Translates to: ALLNQGRGEITLPLGLDLEERSL*LWDLTC
Trigger: GCAGGTCAAGTCCCAAAGGCAAAGTGATCTCTCCTC...CAGGTCAAGTCCCAAAGGCAAAGTGATCTCTCCTCTCCCCTGATTGAGGAGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638825.1
ENST00000675775.1
CDS-3UTR GCA 90 bp AGAAAAAGCTACGTCCGTCCTAGTACAATGCCTGGGCCACTCGGACTCGTCCGGAGGATGCCTCTTCCATaGCAAGAACACGGATCTTGT +
Preference number: 4 (lower is better)
Translates to: RKSYVRPSTMPGPLGLVRRMPLP*QEHGSC
Trigger: ACAAGATCCGTGTTCTTGGCATGGAAGAGGCATCCT...CCGGACGAGTCCGAGTGGCCCAGGCATTGTACTAGGACGGACGTAGCTTTTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638825.1
CDS-3UTR GCA 90 bp CTCCTGCATTCCTGGGTACCCCTGCCTTGGGGTCATGGCCTAAAGTCAACCTGTAGGATGCCTCTTCCATaGCAAGAACACGGATCTTGT +
Preference number: 4 (lower is better)
Translates to: LLHSWVPLPWGHGLKSTCRMPLP*QEHGSC
Trigger: ACAAGATCCGTGTTCTTGGCATGGAAGAGGCATCCT...ACAGGTTGACTTTAGGCCATGACCCCAAGGCAGGGGTACCCAGGAATGCAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000638825.1
ENST00000675775.1
CDS-3UTR GCA 90 bp CACCTCCAACTGGGAAAAAGCCAGTCGCAAAGGGGAACATCAGGCCCATCCATGAGAGACTGTCTTGTCTaGTCTTTGGGGCCACACCAA +
Preference number: 4 (lower is better)
Translates to: HLQLGKSQSQRGTSGPSMRDCLV*SLGPHQ
Trigger: TTGGTGTGGCCCCAAAGAGCAGACAAGACAGTCTCT...CATGGATGGGCCTGATGTTCCCCTTTGCGACTGGCTTTTTCCCAGTTGGAGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000638825.1
CDS-3UTR CCA 90 bp CCCCCAGAAATGTACAGGTTTCTACTGAACGCCGTTACAGTTTGGCTCCAACAAAGGCGGGGGTTCTCCTaGCTGGGTTTGATTTGCGGG +
Preference number: 4 (lower is better)
Translates to: PPEMYRFLLNAVTVWLQQRRGFS*LGLICG
Trigger: CCCGCAAATCAAACCCAGCCAGGAGAACCCCCGCCT...TTGTTGGAGCCAAACTGTAACGGCGTTCAGTAGAAACCTGTACATTTCTGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000265969.8
CDS-3UTR CCA 90 bp AGAGGGCCTAGTGGTAGAAATGGTAAGTCTTGGGTATTGACTGAGTCAGCTTGCAGGCGGGGGTTCTCCTaGCTGGGTTTGATTTGCGGG +
Preference number: 4 (lower is better)
Translates to: RGPSGRNGKSWVLTESACRRGFS*LGLICG
Trigger: CCCGCAAATCAAACCCAGCCAGGAGAACCCCCGCCT...GCAAGCTGACTCAGTCAATACCCAAGACTTACCATTTCTACCACTAGGCCCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000639325.2
ENST00000640318.2
CDS-3UTR CCA 90 bp ACTAAGAAAGCAGATCTCCCACCACTCAGCCCAGGCCCCTTTGCTTCAAATCGTTCGGCACAAAGCTTTTaGGGGAAAGGTCAGCCGCTC +
Preference number: 4 (lower is better)
Translates to: TKKADLPPLSPGPFASNRSAQSF*GKGQPL
Trigger: GAGCGGCTGACCTTTCCCCCAAAAGCTTTGTGCCGA...ACGATTTGAAGCAAAGGGGCCTGGGCTGAGTGGTGGGAGATCTGCTTTCTTAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000639325.2
ENST00000640318.2
CDS-3UTR CCA 90 bp GTCCTCAATAGGAACTCCATACGTGGATACATGGGAAGGCTCTGTCTCCCTGAGTCGGCACAAAGCTTTTaGGGGAAAGGTCAGCCGCTC +
Preference number: 4 (lower is better)
Translates to: VLNRNSIRGYMGRLCLPESAQSF*GKGQPL
Trigger: GAGCGGCTGACCTTTCCCCCAAAAGCTTTGTGCCGA...CTCAGGGAGACAGAGCCTTCCCATGTATCCACGTATGGAGTTCCTATTGAGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000640909.2
CDS-3UTR CCA 90 bp ATCCTCTACGGTCAGTTACCATTTGGCCGTAGAAAAAGCTACGTCCGTCCTAGTGGGTTGAAGCGCTCGTaGGTCTCCAGGCAGAAGGTG +
Preference number: 4 (lower is better)
Translates to: ILYGQLPFGRRKSYVRPSGLKRS*VSRQKV
Trigger: CACCTTCTGCCTGGAGACCCACGAGCGCTTCAACCC...ACTAGGACGGACGTAGCTTTTTCTACGGCCAAATGGTAACTGACCGTAGAGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265969.8
CDS-3UTR CCA 90 bp TCTGCAGTTGCACTTTCTACAGTTTCTGTTACCTGCAGTCAGCCACAGTCCGAATGGCGCTGGGGTCATTaGGCTGTGCCCCTATCCTCT +
Preference number: 4 (lower is better)
Translates to: SAVALSTVSVTCSQPQSEWRWGH*AVPLSS
Trigger: AGAGGATAGGGGCACAGCCCAATGACCCCAGCGCCA...TTCGGACTGTGGCTGACTGCAGGTAACAGAAACTGTAGAAAGTGCAACTGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS-3UTR CCA 90 bp CAGGTTTCTACTGAACGCCGTTACAGTTTGGCTCCAACAACGTGTGTGAAAGTCAGTGCGTGTGCTCACTaGCGCTGGGGTCATTGGGCT +
Preference number: 4 (lower is better)
Translates to: QVSTERRYSLAPTTCVKVSACAH*RWGHWA
Trigger: AGCCCAATGACCCCAGCGCCAGTGAGCACACGCACT...GACTTTCACACACGTTGTTGGAGCCAAACTGTAACGGCGTTCAGTAGAAACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265969.8
CDS-3UTR CCA 90 bp GCCTGGGCCACTCGGACTCGTCCGGCAAACCTGCATGGCGTGAATTTACTCTGTCAGATTTACAATAATTaGGAGATCCCAGCTGCGGTG +
Preference number: 4 (lower is better)
Translates to: AWATRTRPANLHGVNLLCQIYNN*EIPAAV
Trigger: CACCGCAGCTGGGATCTCCCAATTATTGTAAATCTG...ACAGAGTAAATTCACGCCATGCAGGTTTGCCGGACGAGTCCGAGTGGCCCAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265969.8
ENST00000638366.1
ENST00000640909.2
CDS-3UTR CCA 90 bp GCTACGTCCGTCCTAGTACAATGCCTGGGCCACTCGGACTCGTCCGGCAAACCTCTGAGTACTGTGGTGTaGAGAGTTTACGACAGATTT +
Preference number: 4 (lower is better)
Translates to: ATSVLVQCLGHSDSSGKPLSTVV*RVYDRF
Trigger: AAATCTGTCGTAAACTCTCCACACCACAGTACTCAG...AGGTTTGCCGGACGAGTCCGAGTGGCCCAGGCATTGTACTAGGACGGACGTAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265969.8
ENST00000638366.1
ENST00000640909.2
CDS-3UTR CCA 90 bp CGAGATGCAGAAGTGTGTCTCTGCAAACCTCCGACTGCTTCAGGAAAACAAATCTGCTGTCAGGGGTCTTaGGGAGACATCCGCTGGGTC +
Preference number: 4 (lower is better)
Translates to: RDAEVCLCKPPTASGKQICCQGS*GDIRWV
Trigger: GACCCAGCGGATGTCTCCCCAAGACCCCTGACAGCA...GATTTGTTTTCCTGAAGCAGTCGGAGGTTTGCAGAGACACACTTCTGCATCTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265969.8
CDS-3UTR CCA 90 bp GGGTCTTGGGGAGACATCCGCTGGGTCACAAGCATGCCAAACGGGGAAGAAGGCGAAAGTTGGTCACACTaGATCTACACACCGATAAGA +
Preference number: 4 (lower is better)
Translates to: GSWGDIRWVTSMPNGEEGESWSH*IYTPIR
Trigger: TCTTATCGGTGTGTAGATCCAGTGTGACCAACTTTC...GCCTTCTTCCCCGTTTGGCATGCTTGTGACCCAGCGGATGTCTCCCCAAGACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000638825.1
CDS-3UTR CCA 90 bp ACAGCTGGCTTTTCTGCCCTGGTCTCCAGGCACCGCCAAAGTACTTACTGTTCAAATTCTACTCAGCTATaGAGACAGGCTCTGCCGGGG +
Preference number: 4 (lower is better)
Translates to: TAGFSALVSRHRQSTYCSNSTQL*RQALPG
Trigger: CCCCGGCAGAGCCTGTCTCCATAGCTGAGTAGAATT...TGAACAGTAAGTACTTTGGCGGTGCCTGGAGACCAGGGCAGAAAAGCCAGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CCA 90 bp TGGGAGAGGGGAGGGAAACAGTATGGAGAGGACGCGGATGACGATGTGGGGGTTGGTAGAGGTAGACTATaGGCTTTATATCTTCGGACC +
Preference number: 4 (lower is better)
Translates to: WERGGKQYGEDADDDVGVGRGRL*ALYLRT
Trigger: GGTCCGAAGATATAAAGCCCATAGTCTACCTCTACC...AACCCCCACATCGTCATCCGCGTCCTCTCCATACTGTTTCCCTCCCCTCTCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CCA 90 bp CTCTCAGGCACCTACAGAAATCCCAGGAAGGGAAGGGTATGCGGCAGGGTGAAAAAATCAATCATCCACTaGGGGAGGCCACCCAAACCA +
Preference number: 4 (lower is better)
Translates to: LSGTYRNPRKGRVCGRVKKSIIH*GRPPKP
Trigger: TGGTTTGGGTGGCCTCCCCCAGTGGATGATTGATTT...TTTCACCCTGCCGCATACCCTTCCCTTCCTGGGATTTCTGTAGGTGCCTGAGAG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CCA 90 bp CTAGCATCCCCCAAGAGGTCCTACAACCAGGTGAGAATTGGATTCTTGATACCCGGATTCTTGACTGGCTaGCCCAGGGCACCTGTGCTT +
Preference number: 4 (lower is better)
Translates to: LASPKRSYNQVRIGFLIPGFLTG*PRAPVL
Trigger: AAGCACAGGTGCCCTGGGCCAGCCAGTCAAGAATCC...GGGTATCAAGAATCCAATTCTCACCTGGTTGTAGGACCTCTTGGGGGATGCTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CCA 90 bp CTGGCGTCACTTCATTTCTCCGCTACTTCCCCCACAGCCCACCTGAGGACAACATTTCCAGGCTTGAAATaGGCTGAGATGAGCATCTGC +
Preference number: 4 (lower is better)
Translates to: LASLHFSATSPTAHLRTTFPGLK*AEMSIC
Trigger: GCAGATGCTCATCTCAGCCCATTTCAAGCCTGGAAA...TGTTGTCCTCAGGTGGGCTGTGGGGGAAGTAGCGGAGAAATGAAGTGACGCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CCA 90 bp ACTCGTCCGGCAAACCTGCATGGCGTGAATTTACTCTGTCCGAGGGTGAGGAGGCCTCCCCATTCAGTTTaGAATCTGGCACTCCTTCTT +
Preference number: 4 (lower is better)
Translates to: TRPANLHGVNLLCPRVRRPPHSV*NLALLL
Trigger: AAGAAGGAGTGCCAGATTCCAAACTGAATGGGGAGG...CCTCCTCACCCTCGGACAGAGTAAATTCACGCCATGCAGGTTTGCCGGACGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638366.1
CDS-3UTR CCA 90 bp CACCACTCAGCCCAGGCCCCTTTGCTTCAAATCGTGTCTCAGAGGGAGAACAGTAGGAGAACCTTGTCCTaGGTACTCTGCAGCTTAAGG +
Preference number: 4 (lower is better)
Translates to: HHSAQAPLLQIVSQRENSRRTLS*VLCSLR
Trigger: CCTTAAGCTGCAGAGTACCCAGGACAAGGTTCTCCT...ACTGTTCTCCCTCTGAGACACGATTTGAAGCAAAGGGGCCTGGGCTGAGTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS-3UTR CCA 90 bp CCACCCAGATGCTTAATAGCCACCAGTGTCCTCGGCCAAGCCGCCTGGTCAAGTCCTCCCTCTGGCTTGTaGATTGATTATCTTTCAAGG +
Preference number: 4 (lower is better)
Translates to: PPRCLIATSVLGQAAWSSPPSGL*IDYLSR
Trigger: CCTTGAAAGATAATCAATCCACAAGCCAGAGGGAGG...ACTTGACCAGGCGGCTTGGCCGAGGACACTGGTGGCTATTAAGCATCTGGGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638825.1
CDS-3UTR CCA 90 bp CAAGAGCAGCCTGGGGGAGTCAAGGCTCCTCCTGCATTCCTGGGTACCCCTGCCGTTTTCTCCTGCGTGTaGTTTAATCACTTCAAATAC +
Preference number: 4 (lower is better)
Translates to: QEQPGGVKAPPAFLGTPAVFSCV*FNHFKY
Trigger: GTATTTGAAGTGATTAAACCACACGCAGGAGAAAAC...GGCAGGGGTACCCAGGAATGCAGGAGGAGCCTTGACTCCCCCAGGCTGCTCTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000638825.1
CDS-3UTR CCA 90 bp GTGAATTTACTCTGTCCGAGGGTGAGGAGGGGCTGCAGGTCCACCCAGATGCTTTCTAGCACCTCCAACTaGGAAAAAGCCAGTCGCAAA +
Preference number: 4 (lower is better)
Translates to: VNLLCPRVRRGCRSTQMLSSTSN*EKASRK
Trigger: TTTGCGACTGGCTTTTTCCCAGTTGGAGGTGCTAGA...AAGCATCTGGGTGGACCTGCAGCCCCTCCTCACCCTCGGACAGAGTAAATTCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638825.1
3UTR CAA 72 bp TCACAATCACTAAAGGGCCCAAAGTTCGGGATGGTTTaGGGCAGGGGACAAGGAACATCCATCAGGGATCCC +
Preference number: 4 (lower is better)
Translates to: SQSLKGPKFGMV*GRGQGTSIRDP
Trigger: GGGATCCCTGATGGATGTTCCTTGTCCCCTGCCCAAAACCATCCCGAACTTTGGGCCCTTTAGTGATTGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR CAA 72 bp AGAAAGCAGATCTCCCACCACTCAGCCCAGGCCCCTTaGCTTCAAATCGTGTCTCAGAGGGAGAACAGTAGT +
Preference number: 4 (lower is better)
Translates to: RKQISHHSAQAP*LQIVSQRENSS
Trigger: ACTACTGTTCTCCCTCTGAGACACGATTTGAAGCAAAGGGGCCTGGGCTGAGTGGTGGGAGATCTGCTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS-3UTR TCA 90 bp GGATGTGGTTTTCAGTATCTTGCATTACAGGACCACATCTGTGCCCACACTGCACGAAATTGTTCACGATaGCGGGCACGGGCATGGCGA +
Preference number: 4 (lower is better)
Translates to: GCGFQYLALQDHICAHTARNCSR*RARAWR
Trigger: TCGCCATGCCCGTGCCCGTCATCGTGAACAATTTCG...TGCAGTGTGGGCACAGATGTGGTCCTGTAATGCAAGATACTGAAAACCACATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS-3UTR TCA 90 bp TGGGGAAACTATGGCAGAGAGGGTAACTTGCTCAAGGAGGAGAACCTTGTCCTGGGACATGTGTCACTCTaGGTACTGTGGTGTGGAGAG +
Preference number: 4 (lower is better)
Translates to: WGNYGREGNLLKEENLVLGHVSL*VLWCGE
Trigger: CTCTCCACACCACAGTACTCAGAGTGACACATGTCC...CAGGACAAGGTTCTCCTCCTTGAGCAAGTTACCCTCTCTGCCATAGTTTCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS-3UTR TCA 90 bp GGGTCTTGGGGAGACATCCGCTGGGTCACAAGCATGCCAAACGGGGAAGAAGGCTGGAAGCTTTCCTCTTaGTCTTGTGTACAAAAAGGA +
Preference number: 4 (lower is better)
Translates to: GSWGDIRWVTSMPNGEEGWKLSS*SCVQKG
Trigger: TCCTTTTTGTACACAAGATCAAGAGGAAAGCTTCCA...GCCTTCTTCCCCGTTTGGCATGCTTGTGACCCAGCGGATGTCTCCCCAAGACCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000638825.1
CDS-3UTR TCA 90 bp CGTAGAAAAAGCTACGTCCGTCCTAGTACAATGCCTGGGCCACTCGGACTCGTCAATATGACCGATGACTaGCCGACTGCCCTTTTTGGA +
Preference number: 4 (lower is better)
Translates to: RRKSYVRPSTMPGPLGLVNMTDD*PTALFG
Trigger: TCCAAAAAGGGCAGTCGGTCAGTCATCGGTCATATT...GACGAGTCCGAGTGGCCCAGGCATTGTACTAGGACGGACGTAGCTTTTTCTACG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000638825.1
CDS-3UTR TCA 90 bp CACCTCCAACTGGGAAAAAGCCAGTCGCAAAGGGGAACATCAGGCCCATCCATGAATATGACCGATGACTaGCCGACTGCCCTTTTTGGA +
Preference number: 4 (lower is better)
Translates to: HLQLGKSQSQRGTSGPSMNMTDD*PTALFG
Trigger: TCCAAAAAGGGCAGTCGGTCAGTCATCGGTCATATT...CATGGATGGGCCTGATGTTCCCCTTTGCGACTGGCTTTTTCCCAGTTGGAGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000638825.1
CDS-3UTR TCA 90 bp CCAGAGCCCCATGATCAACTTTATGTGCTATGTGCAGGTTCTCATAAAACTGAGACCCAGGGGCACCAGTaGGGTTCCTCTAGCAGGCTC +
Preference number: 4 (lower is better)
Translates to: PEPHDQLYVLCAGSHKTETQGHQ*GSSSRL
Trigger: GAGCCTGCTAGAGGAACCTCACTGGTGCCCCTGGGT...CTCAGTTTTATGAGAACCTGCACATAGCACATAAAGTTGATCATGGGGCTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR TCA 90 bp CTCTCAGGCACCTACAGAAATCCCAGGAAGGGAAGGGTATGCGGCAGGGTGAAAGGTCATCTGTTCCTTTaGAATCCCTGTGTCCACAGA +
Preference number: 4 (lower is better)
Translates to: LSGTYRNPRKGRVCGRVKGHLFL*NPCVHR
Trigger: TCTGTGGACACAGGGATTTCAAAGGAACAGATGACC...TTTCACCCTGCCGCATACCCTTCCCTTCCTGGGATTTCTGTAGGTGCCTGAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR TCA 90 bp GCCCAAAGTTCGGGATGGTTTTGGGCAGGGGACAAGGAACATCCATCAGGGATCCTCAACCCTAACCTTTaGGGAGGGACTAATGATTGG +
Preference number: 4 (lower is better)
Translates to: AQSSGWFWAGDKEHPSGILNPNL*GGTNDW
Trigger: CCAATCATTAGTCCCTCCTCAAAGGTTAGGGTTGAG...GATCCCTGATGGATGTTCCTTGTCCCCTGCCCAAAACCATCCCGAACTTTGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR TCA 90 bp AGACTAAGAAAGCAGATCTCCCACCACTCAGCCCAGGCCCCTTTGCTTCAAATCGATATGTTTCAGTTGTaGGCCAGCCAGAGGACCTGC +
Preference number: 4 (lower is better)
Translates to: RLRKQISHHSAQAPLLQIDMFQL*ASQRTC
Trigger: GCAGGTCCTCTGGCTGGCTCACAACTGAAACATATC...GATTTGAAGCAAAGGGGCCTGGGCTGAGTGGTGGGAGATCTGCTTTCTTAGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS-3UTR GCA 90 bp CATTCTAGAGAGAGCCTGCAAAGTACAGATGACCATGGTATACTTGGGAATGTTTGGCTGGGTTTGATTTaGGGGGCCGGCGGGCACTGG +
Preference number: 4 (lower is better)
Translates to: HSRESLQSTDDHGILGNVWLGLI*GAGGHW
Trigger: CCAGTGCCCGCCGGCCCCGCAAATCAAACCCAGCCA...AACATTCCCAAGTATACCATGGTCATCTGTACTTTGCAGGCTCTCTCTAGAATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000639325.2
ENST00000640318.2
CDS-3UTR GCA 90 bp AGACTAAGAAAGCAGATCTCCCACCACTCAGCCCAGGCCCCTTTGCTTCAAATCAGTAGCGCACTTGCGTaGCATTGCGAACGTTCTCGA +
Preference number: 4 (lower is better)
Translates to: RLRKQISHHSAQAPLLQISSALA*HCERSR
Trigger: TCGAGAACGTTCGCAATGGCACGCAAGTGCGCTACT...GATTTGAAGCAAAGGGGCCTGGGCTGAGTGGTGGGAGATCTGCTTTCTTAGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000639325.2
ENST00000640318.2
CDS-3UTR GCA 90 bp TCTCAGAGGGAGAACAGTAGTTCCCCTTATCTGCAGTTGCACTTTCTACAGTTTCAGCACGTCCTTGGCTaGCTTGGAGGACAGGCCGCT +
Preference number: 4 (lower is better)
Translates to: SQRENSSSPYLQLHFLQFQHVLG*LGGQAA
Trigger: AGCGGCCTGTCCTCCAAGGCAGCCAAGGACGTGCTG...AAACTGTAGAAAGTGCAACTGCAGATAAGGGGAACTACTGTTCTCCCTCTGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000639325.2
ENST00000640318.2
CDS-3UTR GCA 90 bp AGCCGTGCGAGTTTCCACAATTCTATTTGGAGCAAAGTTCTCAGTTTCCACGTGGGGGTCATTGGGCTGTaGCCCTATCCTCTCGGCGTA +
Preference number: 4 (lower is better)
Translates to: SRASFHNSIWSKVLSFHVGVIGL*PYPLGV
Trigger: TACGCCGAGAGGATAGGGGCACAGCCCAATGACCCC...CACGTGGAAACTGAGAACTTTGCTCCAAATAGAATTGTGGAAACTCGCACGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265969.8
CDS-3UTR GCA 90 bp ATTCAAGTCTTAGAAGGGGCAGTGATATGTTTCAGTTGTGAGCCAGCCAGAGGAGGGGTCATTGGGCTGTaGCCCTATCCTCTCGGCGTA +
Preference number: 4 (lower is better)
Translates to: IQVLEGAVICFSCEPARGGVIGL*PYPLGV
Trigger: TACGCCGAGAGGATAGGGGCACAGCCCAATGACCCC...TCCTCTGGCTGGCTCACAACTGAAACATATCACTGCCCCTTCTAAGACTTGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000639325.2
ENST00000640318.2
CDS-3UTR GCA 90 bp TCCGGCAAACCTGCATGGCGTGAATTTACTCTGTCCGAGGGTGAGGAGGGGCTGTTCTTTGGTAGTTTCTaGTTAGCCATGGCTAAGGAG +
Preference number: 4 (lower is better)
Translates to: SGKPAWREFTLSEGEEGLFFGSF*LAMAKE
Trigger: CTCCTTAGCCATGGCTAAGCAGAAACTACCAAAGAA...CAGCCCCTCCTCACCCTCGGACAGAGTAAATTCACGCCATGCAGGTTTGCCGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000640909.2
CDS-3UTR GCA 90 bp GCAAACCTGCATGGCGTGAATTTACTCTGTCCGAGGGTGAGGAGGGGCTGCAGGTTCTTTGGTAGTTTCTaGTTAGCCATGGCTAAGGAG +
Preference number: 4 (lower is better)
Translates to: ANLHGVNLLCPRVRRGCRFFGSF*LAMAKE
Trigger: CTCCTTAGCCATGGCTAAGCAGAAACTACCAAAGAA...CCTGCAGCCCCTCCTCACCCTCGGACAGAGTAAATTCACGCCATGCAGGTTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000640909.2
CDS-3UTR GCA 90 bp GTCAAGGCTCCTCCTGCATTCCTGGGTACCCCTGCCTTGGGGTCATGGCCTAAATTCTTTGGTAGTTTCTaGTTAGCCATGGCTAAGGAG +
Preference number: 4 (lower is better)
Translates to: VKAPPAFLGTPALGSWPKFFGSF*LAMAKE
Trigger: CTCCTTAGCCATGGCTAAGCAGAAACTACCAAAGAA...TTTAGGCCATGACCCCAAGGCAGGGGTACCCAGGAATGCAGGAGGAGCCTTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675775.1
CDS-3UTR GCA 90 bp TTATTCGAGATGCAGAAGTGTGTCTCTGCAAACCTCCGACTGCTTCAGGAAAACAGGGTGAGGAGGGGCTaGAGGTCCACCCAGATGCTT +
Preference number: 4 (lower is better)
Translates to: LFEMQKCVSANLRLLQENRVRRG*RSTQML
Trigger: AAGCATCTGGGTGGACCTGCAGCCCCTCCTCACCCT...GTTTTCCTGAAGCAGTCGGAGGTTTGCAGAGACACACTTCTGCATCTCGAATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265969.8
CDS-3UTR GCA 90 bp GGCCGTAGAAAAAGCTACGTCCGTCCTAGTACAATGCCTGGGCCACTCGGACTCCTGCAAACCTCCGACTaGTTCAGGAAAACAAATCTG +
Preference number: 4 (lower is better)
Translates to: GRRKSYVRPSTMPGPLGLLQTSD*FRKTNL
Trigger: CAGATTTGTTTTCCTGAAGCAGTCGGAGGTTTGCAG...GAGTCCGAGTGGCCCAGGCATTGTACTAGGACGGACGTAGCTTTTTCTACGGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265969.8
CDS-3UTR GCA 90 bp CCGGCAAACCTGCATGGCGTGAATTTACTCTGTCCGAGGGTGAGGAGGGGCTGCGAGCTAAAGCATCATTaGTCTCTTTCCAGGAAATGT +
Preference number: 4 (lower is better)
Translates to: PANLHGVNLLCPRVRRGCELKHH*SLSRKC
Trigger: ACATTTCCTGGAAAGAGAGCAATGATGCTTTAGCTC...GCAGCCCCTCCTCACCCTCGGACAGAGTAAATTCACGCCATGCAGGTTTGCCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265969.8
CDS-3UTR GCA 90 bp TCTCTGCCATCTACACAGCCTGAAGGGAGCCATGGTAAGGACCAGATCAAAGGCTTGGGATGTCTATATTaGTGCTGCAGTCCCTACCGC +
Preference number: 4 (lower is better)
Translates to: SLPSTQPEGSHGKDQIKGLGCLY*CCSPYR
Trigger: GCGGTAGGGACTGCAGCAGCAATATAGACATCCCAA...GCCTTTGATCTGGTCCTTACCATGGCTCCCTTCAGGCTGTGTAGATGGCAGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR GCA 90 bp AGCCCGAAATCAGGGCAGGAATTCTACTCAGCTATGGAGACAGGCTCTGCCGGGCTCCTTCTTACTCAGTaGTGTCATTCTTCTCTGGGT +
Preference number: 4 (lower is better)
Translates to: SPKSGQEFYSAMETGSAGLLLTQ*CHSSLG
Trigger: ACCCAGAGAAGAATGACAGCACTGAGTAAGAAGGAG...CCCGGCAGAGCCTGTCTCCATAGCTGAGTAGAATTCCTGCCCTGATTTCGGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR GCA 90 bp AGAAAAAGCTACGTCCGTCCTAGTACAATGCCTGGGCCACTCGGACTCGTCCGGCTCCTTCTTACTCAGTaGTGTCATTCTTCTCTGGGT +
Preference number: 4 (lower is better)
Translates to: RKSYVRPSTMPGPLGLVRLLLTQ*CHSSLG
Trigger: ACCCAGAGAAGAATGACAGCACTGAGTAAGAAGGAG...CCGGACGAGTCCGAGTGGCCCAGGCATTGTACTAGGACGGACGTAGCTTTTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638366.1
CDS-3UTR GCA 90 bp AGACTAAATGCCACCTGTCACGTCAACCTCCTGCTCACCTGGCACTCCTTCTTACTAGACCCACAGGCCTaGAGTGATGAAATGGCAGCA +
Preference number: 4 (lower is better)
Translates to: RLNATCHVNLLLTWHSFLLDPQA*SDEMAA
Trigger: TGCTGCCATTTCATCACTGCAGGCCTGTGGGTCTAG...TAAGAAGGAGTGCCAGGTGAGCAGGAGGTTGACGTGACAGGTGGCATTTAGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR GCA 90 bp GATTATCTTTCAAGGATGCCTCTTCCATGCCAAGAACACGGATCTTGTGTAGCTGTTCCCTCGTCTCCGTaGGGGCTGCCTCTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: DYLSRMPLPCQEHGSCVAVPSSP*GLPLLF
Trigger: GAAGAGGAGAGGCAGCCCGCACGGAGACGAGGGAAC...AGCTACACAAGATCCGTGTTCTTGGCATGGAAGAGGCATCCTTGAAAGATAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638825.1
CDS-3UTR GCA 90 bp CGTAGAAAAAGCTACGTCCGTCCTAGTACAATGCCTGGGCCACTCGGACTCGTCTCCCTACTTCTGCTCTaGACATTGACTCACACACCT +
Preference number: 4 (lower is better)
Translates to: RRKSYVRPSTMPGPLGLVSLLLL*TLTHTP
Trigger: AGGTGTGTGAGTCAATGTGCAGAGCAGAAGTAGGGA...GACGAGTCCGAGTGGCCCAGGCATTGTACTAGGACGGACGTAGCTTTTTCTACG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638825.1
CDS-3UTR CCA 90 bp CACCACTCAGCCCAGGCCCCTTTGCTTCAAATCGTGTCTCAGAGGGAGAACAGTATCTCCGCGGGAAAATaGAGAAATCGGCACAAAGCT +
Preference number: 4 (lower is better)
Translates to: HHSAQAPLLQIVSQRENSISAGK*RNRHKA
Trigger: AGCTTTGTGCCGATTTCTCCATTTTCCCGCGGAGAT...ACTGTTCTCCCTCTGAGACACGATTTGAAGCAAAGGGGCCTGGGCTGAGTGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000639325.2
ENST00000640318.2
CDS-3UTR CCA 90 bp CGTAGAAAAAGCTACGTCCGTCCTAGTACAATGCCTGGGCCACTCGGACTCGTCATCTCCGCGGGAAAATaGAGAAATCGGCACAAAGCT +
Preference number: 4 (lower is better)
Translates to: RRKSYVRPSTMPGPLGLVISAGK*RNRHKA
Trigger: AGCTTTGTGCCGATTTCTCCATTTTCCCGCGGAGAT...GACGAGTCCGAGTGGCCCAGGCATTGTACTAGGACGGACGTAGCTTTTTCTACG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000640909.2
CDS-3UTR CCA 90 bp CTGGCTTGTGGATTGATTATCTTTCAAGGATGCCTCTTCCATGCCAAGAACACGTGGCGCTGGGGTCATTaGGCTGTGCCCCTATCCTCT +
Preference number: 4 (lower is better)
Translates to: LACGLIIFQGCLFHAKNTWRWGH*AVPLSS
Trigger: AGAGGATAGGGGCACAGCCCAATGACCCCAGCGCCA...CGTGTTCTTGGCATGGAAGAGGCATCCTTGAAAGATAATCAATCCACAAGCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675775.1
CDS-3UTR CCA 90 bp TCTAGAGAGAGCCTGCAAAGTACAGATGACCATGGTATACTTGGGAATGTTGGGAGTGCGTGTGCTCACTaGCGCTGGGGTCATTGGGCT +
Preference number: 4 (lower is better)
Translates to: SRESLQSTDDHGILGNVGSACAH*RWGHWA
Trigger: AGCCCAATGACCCCAGCGCCAGTGAGCACACGCACT...CCCAACATTCCCAAGTATACCATGGTCATCTGTACTTTGCAGGCTCTCTCTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS-3UTR CCA 90 bp TCCGGCAAACCTGCATGGCGTGAATTTACTCTGTCCGAGGGTGAGGAGGGGCTGCTGAGTACTGTGGTGTaGAGAGTTTACGACAGATTT +
Preference number: 4 (lower is better)
Translates to: SGKPAWREFTLSEGEEGLLSTVV*RVYDRF
Trigger: AAATCTGTCGTAAACTCTCCACACCACAGTACTCAG...CAGCCCCTCCTCACCCTCGGACAGAGTAAATTCACGCCATGCAGGTTTGCCGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265969.8
ENST00000638366.1
ENST00000640909.2
CDS-3UTR CCA 90 bp GTCCTCAGCAACCTGGCGGGCCGCGTTGTCTCTTCAGAACATCACGAGACCAACCTGAGTACTGTGGTGTaGAGAGTTTACGACAGATTT +
Preference number: 4 (lower is better)
Translates to: VLSNLAGRVVSSEHHETNLSTVV*RVYDRF
Trigger: AAATCTGTCGTAAACTCTCCACACCACAGTACTCAG...GTTGGTCTCGTGATGTTCTGAAGAGACAACGCGGCCCGCCAGGTTGCTGAGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CCA 90 bp ACTCGGACTCGTCCGGCAAACCTGCATGGCGTGAATTTACTCTGTCCGAGGGTGTCTAAAATTTCTTCCTaGGCCAGCGGACATGTGTCA +
Preference number: 4 (lower is better)
Translates to: TRTRPANLHGVNLLCPRVSKISS*ASGHVS
Trigger: TGACACATGTCCGCTGGCCCAGGAAGAAATTTTAGA...CACCCTCGGACAGAGTAAATTCACGCCATGCAGGTTTGCCGGACGAGTCCGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265969.8
ENST00000638366.1
ENST00000640909.2
CDS-3UTR CCA 90 bp CAGAGGGAGAACAGTAGTTCCCCTTATCTGCAGTTGCACTTTCTACAGTTTCTGAGGGCCTGGTCTATGTaGGGGCAGTCTTCGTTCGCC +
Preference number: 4 (lower is better)
Translates to: QRENSSSPYLQLHFLQFLRAWSM*GQSSFA
Trigger: GGCGAACGAAGACTGCCCCCACATAGACCAGGCCCT...CAGAAACTGTAGAAAGTGCAACTGCAGATAAGGGGAACTACTGTTCTCCCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000639325.2
ENST00000640318.2
CDS-3UTR CCA 90 bp TCTCAGAGGGAGAACAGTAGTTCCCCTTATCTGCAGTTGCACTTTCTACAGTTTCATTCCTCCACCAGGTaGGCACGCGTACTCCCCGGT +
Preference number: 4 (lower is better)
Translates to: SQRENSSSPYLQLHFLQFHSSTR*ARVLPG
Trigger: ACCGGGGAGTACGCGTGCCCACCTGGTGGAGGAATG...AAACTGTAGAAAGTGCAACTGCAGATAAGGGGAACTACTGTTCTCCCTCTGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000639325.2
ENST00000640318.2
CDS-3UTR CCA 90 bp CCAGAGCCCCATGATCAACTTTATGTGCTATGTGCAGGTTCTCATAAAACTGAGGCTACAGGCGTCTCCTaGGAAGGACCTCGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: PEPHDQLYVLCAGSHKTEATGVS*EGPRAG
Trigger: CCCAGCTCGAGGTCCTTCCCAGGAGACGCCTGTAGC...CTCAGTTTTATGAGAACCTGCACATAGCACATAAAGTTGATCATGGGGCTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CCA 90 bp GTCCTCAGCAACCTGGCGGGCCGCGTTGTCTCTTCAGAACATCACGAGACCAACCACAGAATAAGTCGATaGTATTCCATGGGTAGAGGT +
Preference number: 4 (lower is better)
Translates to: VLSNLAGRVVSSEHHETNHRISR*YSMGRG
Trigger: ACCTCTACCCATGGAATACCATCGACTTATTCTGTG...GTTGGTCTCGTGATGTTCTGAAGAGACAACGCGGCCCGCCAGGTTGCTGAGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CCA 90 bp GCCCAAAGTTCGGGATGGTTTTGGGCAGGGGACAAGGAACATCCATCAGGGATCCTCTCACAATTCCTGTaGGGCCACCACATTTACCTT +
Preference number: 4 (lower is better)
Translates to: AQSSGWFWAGDKEHPSGILSQFL*GHHIYL
Trigger: AAGGTAAATGTGGTGGCCCCACAGGAATTGTGAGAG...GATCCCTGATGGATGTTCCTTGTCCCCTGCCCAAAACCATCCCGAACTTTGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CCA 90 bp CAGATCAAAGGCTGTCTAGCGTTTCCAAATCACACCCGCCCCCACTCTGTCCCAGGAGGGACTAATGATTaGGTGGGGAAGCTTAAGTCT +
Preference number: 4 (lower is better)
Translates to: QIKGCLAFPNHTRPHSVPGGTND*VGKLKS
Trigger: AGACTTAAGCTTCCCCACCCAATCATTAGTCCCTCC...TGGGACAGAGTGGGGGCGGGTGTGATTTGGAAACGCTAGACAGCCTTTGATCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CCA 90 bp AGCCGTGCGAGTTTCCACAATTCTATTTGGAGCAAAGTTCTCAGTTTCCACGTGTCTGCAAGAGCAGCCTaGGGGAGTCAAGGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: SRASFHNSIWSKVLSFHVSARAA*GSQGSS
Trigger: GGAGGAGCCTTGACTCCCCCAGGCTGCTCTTGCAGA...CACGTGGAAACTGAGAACTTTGCTCCAAATAGAATTGTGGAAACTCGCACGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638825.1
CDS-3UTR TCA 90 bp ATTTTGAGTAGCGTGATGAAATCTCATGCCATGTCACTCCATCCCACCCAGAACTGTTCACGATGGGGTTaGAGCGCTCGTGGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: ILSSVMKSHAMSLHPTQNCSRWG*SARGSP
Trigger: TGGAGACCCACGAGCGCTTCAACCCCATCGTGAACA...GTTCTGGGTGGGATGGAGTGACATGGCATGAGATTTCATCACGCTACTCAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000639325.2
ENST00000640318.2
CDS-3UTR TCA 90 bp TCTAGAGAGAGCCTGCAAAGTACAGATGACCATGGTATACTTGGGAATGTTGGGTGTTCACGATGGGGTTaGAGCGCTCGTGGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: SRESLQSTDDHGILGNVGCSRWG*SARGSP
Trigger: TGGAGACCCACGAGCGCTTCAACCCCATCGTGAACA...CCCAACATTCCCAAGTATACCATGGTCATCTGTACTTTGCAGGCTCTCTCTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000639325.2
ENST00000640318.2
CDS-3UTR TCA 90 bp TTATTCGAGATGCAGAAGTGTGTCTCTGCAAACCTCCGACTGCTTCAGGAAAACCGAAATTGTTCACGATaGCGGGCACGGGCATGGCGA +
Preference number: 4 (lower is better)
Translates to: LFEMQKCVSANLRLLQENRNCSR*RARAWR
Trigger: TCGCCATGCCCGTGCCCGTCATCGTGAACAATTTCG...GTTTTCCTGAAGCAGTCGGAGGTTTGCAGAGACACACTTCTGCATCTCGAATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265969.8
CDS-3UTR TCA 90 bp AGGATGCCTCTTCCATGCCAAGAACACGGATCTTGTGTAGCTAAGTTCACAGGGCAAACCTGCATGGCGTaGATTTACTCTGTCCGAGGG +
Preference number: 4 (lower is better)
Translates to: RMPLPCQEHGSCVAKFTGQTCMA*IYSVRG
Trigger: CCCTCGGACAGAGTAAATTCACGCCATGCAGGTTTG...CCCTGTGAACTTAGCTACACAAGATCCGTGTTCTTGGCATGGAAGAGGCATCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638825.1
CDS-3UTR TCA 90 bp AAAAGCTACGTCCGTCCTAGTACAATGCCTGGGCCACTCGGACTCGTCCGGCAATTCTCAGTTTCCACGTaGGAGATGAACTATGAAGGT +
Preference number: 4 (lower is better)
Translates to: KSYVRPSTMPGPLGLVRQFSVST*EMNYEG
Trigger: ACCTTCATAGTTCATCTCTCACGTGGAAACTGAGAA...TTGCCGGACGAGTCCGAGTGGCCCAGGCATTGTACTAGGACGGACGTAGCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000638825.1
CDS-3UTR TCA 90 bp TGCCAAAAGGCTCCAGCTGCAGCCTGTCTCCATGAAGGCATAGAAGGGGACCATGTAAGTCTTGGGTATTaGCTGAGTCAGCTTGCACTA +
Preference number: 4 (lower is better)
Translates to: CQKAPAAACLHEGIEGDHVSLGY*LSQLAL
Trigger: TAGTGCAAGCTGACTCAGTCAATACCCAAGACTTAC...ATGGTCCCCTTCTATGCCTTCATGGAGACAGGCTGCAGCTGGAGCCTTTTGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS-3UTR TCA 90 bp GGCGTGAATTTACTCTGTCCGAGGGTGAGGAGGGGCTGCAGGTCCACCCAGATGAATACAATTAACACTTaGGCTTCTCTTCTTGGCTCT +
Preference number: 4 (lower is better)
Translates to: GVNLLCPRVRRGCRSTQMNTINT*ASLLGS
Trigger: AGAGCCAAGAAGAGAAGCTCAAGTGTTAATTGTATT...CATCTGGGTGGACCTGCAGCCCCTCCTCACCCTCGGACAGAGTAAATTCACGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638825.1
CDS-3UTR GCA 90 bp GTCCTAGTACAATGCCTGGGCCACTCGGACTCGTCCGGCAAACCTGCATGGCGTTCTGAAGTACTAAATTaGATACAATGCCAGGTTGTG +
Preference number: 4 (lower is better)
Translates to: VLVQCLGHSDSSGKPAWRSEVLN*IQCQVV
Trigger: CACAACCTGGCATTGTATGCAATTTAGTACTTCAGA...ACGCCATGCAGGTTTGCCGGACGAGTCCGAGTGGCCCAGGCATTGTACTAGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265969.8
CDS-3UTR GCA 90 bp CTGCCTCTGTGGAGATGGTGCCGCCTGAGACCCTTCTCTGGCTCTGAATGCTGGATCTATGGTTTAAGATaGTTTCAGAAACTGGGGCAT +
Preference number: 4 (lower is better)
Translates to: LPLWRWCRLRPFSGSECWIYGLR*FQKLGH
Trigger: ATGCCCCAGTTTCTGAAAGCATCTTAAACCATAGAT...CCAGCATTCAGAGCCAGAGAAGGGTCTCAGGCGGCACCATCTCCACAGAGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR GCA 90 bp TGCCAAAAGGCTCCAGCTGCAGCCTGTCTCCATGAAGGCATAGAAGGGGACCATCATCTGTGCCCACACTaGAGAATAACCTTTGTCCAT +
Preference number: 4 (lower is better)
Translates to: CQKAPAAACLHEGIEGDHHLCPH*RITFVH
Trigger: ATGGACAAAGGTTATTCTGCAGTGTGGGCACAGATG...ATGGTCCCCTTCTATGCCTTCATGGAGACAGGCTGCAGCTGGAGCCTTTTGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS-3UTR GCA 90 bp GAAACTATGGCAGAGAGGGTAACTTGCTCAAGGAGGAGAACCTTGTCCTGGGTATTGACTGAGTCAGCTTaGACTAGGGAGGCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: ETMAERVTCSRRRTLSWVLTESA*TREARA
Trigger: TGCTCTGGCCTCCCTAGTGCAAGCTGACTCAGTCAA...TACCCAGGACAAGGTTCTCCTCCTTGAGCAAGTTACCCTCTCTGCCATAGTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS-3UTR GCA 90 bp GGCAAACCTGCATGGCGTGAATTTACTCTGTCCGAGGGTGAGGAGGGGCTGCAGCATTCTGTTTTCTCCTaGGTGTGGTTTAATCACTTC +
Preference number: 4 (lower is better)
Translates to: GKPAWREFTLSEGEEGLQHSVFS*VWFNHF
Trigger: GAAGTGATTAAACCACACGCAGGAGAAAACAGAATG...CTGCAGCCCCTCCTCACCCTCGGACAGAGTAAATTCACGCCATGCAGGTTTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638825.1
CDS-3UTR CCA 90 bp GATGACCATGGTATACTTGGGAATGTTGGGTTTATAGAATTAAAGTGGGTTGGTTCGGCGCGGGGGAGATaGATGCCGCCTGCCTTCCTC +
Preference number: 4 (lower is better)
Translates to: DDHGILGNVGFIELKWVGSARGR*MPPAFL
Trigger: GAGGAAGGCAGGCGGCATCCATCTCCCCCGCGCCGA...ACCAACCCACTTTAATTCTATAAACCCAACATTCCCAAGTATACCATGGTCATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000639325.2
ENST00000640318.2
CDS-3UTR CCA 90 bp AGAGGGCCTAGTGGTAGAAATGGTAAGTCTTGGGTATTGACTGAGTCAGCTTGCTCGGCACAAAGCTTTTaGGGGAAAGGTCAGCCGCTC +
Preference number: 4 (lower is better)
Translates to: RGPSGRNGKSWVLTESACSAQSF*GKGQPL
Trigger: GAGCGGCTGACCTTTCCCCCAAAAGCTTTGTGCCGA...GCAAGCTGACTCAGTCAATACCCAAGACTTACCATTTCTACCACTAGGCCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000639325.2
ENST00000640318.2
CDS-3UTR CCA 90 bp GATTATCTTTCAAGGATGCCTCTTCCATGCCAAGAACACGGATCTTGTGTAGCTGGGTTGAAGCGCTCGTaGGTCTCCAGGCAGAAGGTG +
Preference number: 4 (lower is better)
Translates to: DYLSRMPLPCQEHGSCVAGLKRS*VSRQKV
Trigger: CACCTTCTGCCTGGAGACCCACGAGCGCTTCAACCC...AGCTACACAAGATCCGTGTTCTTGGCATGGAAGAGGCATCCTTGAAAGATAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675775.1
CDS-3UTR CCA 90 bp GATTATCTTTCAAGGATGCCTCTTCCATGCCAAGAACACGGATCTTGTGTAGCTAGTGCGTGTGCTCACTaGCGCTGGGGTCATTGGGCT +
Preference number: 4 (lower is better)
Translates to: DYLSRMPLPCQEHGSCVASACAH*RWGHWA
Trigger: AGCCCAATGACCCCAGCGCCAGTGAGCACACGCACT...AGCTACACAAGATCCGTGTTCTTGGCATGGAAGAGGCATCCTTGAAAGATAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675775.1
CDS-3UTR CCA 90 bp ATCCTCTACGGTCAGTTACCATTTGGCCGTAGAAAAAGCTACGTCCGTCCTAGTAGATCCCAGCTGCGGTaGCCGCGGAATATGCTTCTT +
Preference number: 4 (lower is better)
Translates to: ILYGQLPFGRRKSYVRPSRSQLR*PRNMLL
Trigger: AAGAAGCATATTCCGCGGCCACCGCAGCTGGGATCT...ACTAGGACGGACGTAGCTTTTTCTACGGCCAAATGGTAACTGACCGTAGAGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265969.8
CDS-3UTR CCA 90 bp GCCCAAAGTTCGGGATGGTTTTGGGCAGGGGACAAGGAACATCCATCAGGGATCTCTAAAATTTCTTCCTaGGCCAGCGGACATGTGTCA +
Preference number: 4 (lower is better)
Translates to: AQSSGWFWAGDKEHPSGISKISS*ASGHVS
Trigger: TGACACATGTCCGCTGGCCCAGGAAGAAATTTTAGA...GATCCCTGATGGATGTTCCTTGTCCCCTGCCCAAAACCATCCCGAACTTTGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CCA 90 bp GAGAACAGTAGTTCCCCTTATCTGCAGTTGCACTTTCTACAGTTTCTGTTACCTCATTCCTCCACCAGGTaGGCACGCGTACTCCCCGGT +
Preference number: 4 (lower is better)
Translates to: ENSSSPYLQLHFLQFLLPHSSTR*ARVLPG
Trigger: ACCGGGGAGTACGCGTGCCCACCTGGTGGAGGAATG...AGGTAACAGAAACTGTAGAAAGTGCAACTGCAGATAAGGGGAACTACTGTTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000639325.2
ENST00000640318.2
CDS-3UTR CCA 90 bp CAAGTCACTCTCACAGCCTCTGTCGGCATATACTTAGCAATGACAGGGCTTTCTTGGGGAGACATCCGCTaGGTCACAAGCATGCCAAAC +
Preference number: 4 (lower is better)
Translates to: QVTLTASVGIYLAMTGLSWGDIR*VTSMPN
Trigger: GTTTGGCATGCTTGTGACCCAGCGGATGTCTCCCCA...AGAAAGCCCTGTCATTGCTAAGTATATGCCGACAGAGGCTGTGAGAGTGACTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638825.1
CDS-3UTR CCA 90 bp CCAGAGCCCCATGATCAACTTTATGTGCTATGTGCAGGTTCTCATAAAACTGAGCGCAACTCCTCTTGGTaGCGGATAGCCGGGGTCTCA +
Preference number: 4 (lower is better)
Translates to: PEPHDQLYVLCAGSHKTERNSSW*RIAGVS
Trigger: TGAGACCCCGGCTATCCGCCACCAAGAGGAGTTGCG...CTCAGTTTTATGAGAACCTGCACATAGCACATAAAGTTGATCATGGGGCTCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CCA 90 bp TCGGAGACCCCTGGCCATGTTCCTCTCAGGCACCTACAGAAATCCCAGGAAGGGGTCTTTCGTACAAGATaGCAAAGCATTTCACGTACA +
Preference number: 4 (lower is better)
Translates to: SETPGHVPLRHLQKSQEGVFRTR*QSISRT
Trigger: TGTACGTGAAATGCTTTGCCATCTTGTACGAAAGAC...CCCTTCCTGGGATTTCTGTAGGTGCCTGAGAGGAACATGGCCAGGGGTCTCCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CCA 90 bp TCCGGCAAACCTGCATGGCGTGAATTTACTCTGTCCGAGGGTGAGGAGGGGCTGATTCAGTTTGGAATCTaGCACTCCTTCTTACTCAGT +
Preference number: 4 (lower is better)
Translates to: SGKPAWREFTLSEGEEGLIQFGI*HSFLLS
Trigger: ACTGAGTAAGAAGGAGTGCCAGATTCCAAACTGAAT...CAGCCCCTCCTCACCCTCGGACAGAGTAAATTCACGCCATGCAGGTTTGCCGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638366.1
CDS-3UTR CCA 90 bp AGACTAAGAAAGCAGATCTCCCACCACTCAGCCCAGGCCCCTTTGCTTCAAATCCAGTGGGATAGGCAGTaGGGTAGTCTGAAGACATTC +
Preference number: 4 (lower is better)
Translates to: RLRKQISHHSAQAPLLQIQWDRQ*GSLKTF
Trigger: GAATGTCTTCAGACTACCCCACTGCCTATCCCACTG...GATTTGAAGCAAAGGGGCCTGGGCTGAGTGGTGGGAGATCTGCTTTCTTAGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS-3UTR CCA 90 bp AAGAAGGCAGCCGTGCGAGTTTCCACAATTCTATTTGGAGCAAAGTTCTCAGTTAAGTTCACAGGGTCCTaGCCCACTCCACTGCCCTCC +
Preference number: 4 (lower is better)
Translates to: KKAAVRVSTILFGAKFSVKFTGS*PTPLPS
Trigger: GGAGGGCAGTGGAGTGGGCCAGGACCCTGTGAACTT...AACTGAGAACTTTGCTCCAAATAGAATTGTGGAAACTCGCACGGCTGCCTTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638825.1
CDS-3UTR CCA 90 bp AAGAAGGCAGCCGTGCGAGTTTCCACAATTCTATTTGGAGCAAAGTTCTCAGTTAGCCTCTCTCTCCAGTaGGGACAGCCTAGCGTGCTG +
Preference number: 4 (lower is better)
Translates to: KKAAVRVSTILFGAKFSVSLSLQ*GQPSVL
Trigger: CAGCACGCTAGGCTGTCCCCACTGGAGAGAGAGGCT...AACTGAGAACTTTGCTCCAAATAGAATTGTGGAAACTCGCACGGCTGCCTTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638825.1
CDS-3UTR CCA 90 bp GGAGCAGTTGTGAATGACCATAGGCTGCACCAACTGTTGCTTTCAAAAACCCAGTCTTTCTCTCCCTCCTaGGGGAATGGGATGAGTCCC +
Preference number: 4 (lower is better)
Translates to: GAVVNDHRLHQLLLSKTQSFSPS*GNGMSP
Trigger: GGGACTCATCCCATTCCCCCAGGAGGGAGAGAAAGA...CTGGGTTTTTGAAAGCAACAGTTGGTGCAGCCTATGGTCATTCACAACTGCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638825.1
CDS-3UTR CCA 90 bp CCACGAGAGCTTACTGGGCAGGGCACAGACACTGGGAACCGTCTACCTGCTTTTCTCTCCCATCCCGCTTaGTACTTAGTTTTTAAGAAG +
Preference number: 4 (lower is better)
Translates to: PRELTGQGTDTGNRLPAFLSHPA*YLVFKK
Trigger: CTTCTTAAAAACTAAGTACCAAGCGGGATGGGAGAG...AAAAGCAGGTAGACGGTTCCCAGTGTCTGTGCCCTGCCCAGTAAGCTCTCGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638825.1
3UTR CAA 72 bp GGGCAATCCCACAGGAGTGCATGGGTTTTACAGGTTTaGTGTCCTGGGATTAGCTGGTGTGCATGTCTGAAC +
Preference number: 4 (lower is better)
Translates to: GQSHRSAWVLQV*CPGISWCACLN
Trigger: GTTCAGACATGCACACCAGCTAATCCCAGGACACAAAACCTGTAAAACCCATGCACTCCTGTGGGATTGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379472.4
3UTR CAA 72 bp AGAGGGCCTAGTGGTAGAAATGGTAAGTCTTGGGTATaGACTGAGTCAGCTTGCACTAGGGAGGCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: RGPSGRNGKSWV*TESACTREARA
Trigger: TGCTCTGGCCTCCCTAGTGCAAGCTGACTCAGTCAATACCCAAGACTTACCATTTCTACCACTAGGCCCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
3UTR CAA 72 bp AGTAACAGATTGTTAAGAGCTGCAAAGGGGTCTCTTTaGGCTGCCAAAAGGCTCCAGCTGCAGCCTGTCTCC +
Preference number: 4 (lower is better)
Translates to: SNRLLRAAKGSL*AAKRLQLQPVS
Trigger: GGAGACAGGCTGCAGCTGGAGCCTTTTGGCAGCCAAAAGAGACCCCTTTGCAGCTCTTAACAATCTGTTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
3UTR CAA 72 bp ATGGCAGAGAGGGTAACTTGCTCAAGGAGGAGAACCTaGTCCTGGGTACTCTGCAGCTTAAGGACTTGGGTA +
Preference number: 4 (lower is better)
Translates to: MAERVTCSRRRT*SWVLCSLRTWV
Trigger: TACCCAAGTCCTTAAGCTGCAGAGTACCCAGGACAAGGTTCTCCTCCTTGAGCAAGTTACCCTCTCTGCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS-3UTR TCA 90 bp GGATTGATTATCTTTCAAGGATGCCTCTTCCATGCCAAGAACACGGATCTTGTGCGAAATTGTTCACGATaGCGGGCACGGGCATGGCGA +
Preference number: 4 (lower is better)
Translates to: GLIIFQGCLFHAKNTDLVRNCSR*RARAWR
Trigger: TCGCCATGCCCGTGCCCGTCATCGTGAACAATTTCG...CACAAGATCCGTGTTCTTGGCATGGAAGAGGCATCCTTGAAAGATAATCAATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675775.1
CDS-3UTR TCA 90 bp TCGGACTCGTCCGGCAAACCTGCATGGCGTGAATTTACTCTGTCCGAGGGTGAGTACACACCGATAAGATaGGAGAATCAACCTAGACTA +
Preference number: 4 (lower is better)
Translates to: SDSSGKPAWREFTLSEGEYTPIR*ENQPRL
Trigger: TAGTCTAGGTTGATTCTCTCATCTTATCGGTGTGTA...CTCACCCTCGGACAGAGTAAATTCACGCCATGCAGGTTTGCCGGACGAGTCCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000638825.1
CDS-3UTR TCA 90 bp ACAGCTGGCTTTTCTGCCCTGGTCTCCAGGCACCGCCAAAGTACTTACTGTTCAAGTGGTGGTAGAAGATaGGTTGGTTCAGCATGCTAT +
Preference number: 4 (lower is better)
Translates to: TAGFSALVSRHRQSTYCSSGGRR*VGSACY
Trigger: ATAGCATGCTGAACCAACTCATCTTCTACCACCACT...TGAACAGTAAGTACTTTGGCGGTGCCTGGAGACCAGGGCAGAAAAGCCAGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR TCA 90 bp AGCCGTGCGAGTTTCCACAATTCTATTTGGAGCAAAGTTCTCAGTTTCCACGTGATCCGTGTGCACGTGTaGGGCACTCCAAGACATGCA +
Preference number: 4 (lower is better)
Translates to: SRASFHNSIWSKVLSFHVIRVHV*GTPRHA
Trigger: TGCATGTCTTGGAGTGCCTCACACGTGCACACGGAT...CACGTGGAAACTGAGAACTTTGCTCCAAATAGAATTGTGGAAACTCGCACGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638825.1
CDS-3UTR GCA 90 bp ATTCAAGTCTTAGAAGGGGCAGTGATATGTTTCAGTTGTGAGCCAGCCAGAGGAGCACTTGCGTGCCATTaGGAACGTTCTCGATCTCCG +
Preference number: 4 (lower is better)
Translates to: IQVLEGAVICFSCEPARGALACH*ERSRSP
Trigger: CGGAGATCGAGAACGTTCGCAATGGCACGCAAGTGC...TCCTCTGGCTGGCTCACAACTGAAACATATCACTGCCCCTTCTAAGACTTGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000639325.2
ENST00000640318.2
CDS-3UTR GCA 90 bp GCAAAGGTTGAGTCCTCAATAGGAACTCCATACGTGGATACATGGGAAGGCTCTGGGATGTTCTTAAAGTaGGTGTGCTCACTGGCGCTG +
Preference number: 4 (lower is better)
Translates to: AKVESSIGTPYVDTWEGSGMFLK*VCSLAL
Trigger: CAGCGCCAGTGAGCACACGCACTTTAAGAACATCCC...AGAGCCTTCCCATGTATCCACGTATGGAGTTCCTATTGAGGACTCAACCTTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640909.2
CDS-3UTR GCA 90 bp CATTCTAGAGAGAGCCTGCAAAGTACAGATGACCATGGTATACTTGGGAATGTTTTGGGAGATCCCAGCTaGGGTGGCCGCGGAATATGC +
Preference number: 4 (lower is better)
Translates to: HSRESLQSTDDHGILGNVLGDPS*GGRGIC
Trigger: GCATATTCCGCGGCCACCGCAGCTGGGATCTCCCAA...AACATTCCCAAGTATACCATGGTCATCTGTACTTTGCAGGCTCTCTCTAGAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS-3UTR GCA 90 bp CATGAAAGAAACTCAGCTCTGCTCCTTCCTAGCAATGCAACGTTGAGTGAATTATTGGGAGATCCCAGCTaGGGTGGCCGCGGAATATGC +
Preference number: 4 (lower is better)
Translates to: HERNSALLLPSNATLSELLGDPS*GGRGIC
Trigger: GCATATTCCGCGGCCACCGCAGCTGGGATCTCCCAA...TAATTCACTCAACGTTGCATTGCTAGGAAGGAGCAGAGCTGAGTTTCTTTCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639495.1
CDS-3UTR GCA 90 bp CCAGAGCCCCATGATCAACTTTATGTGCTATGTGCAGGTTCTCATAAAACTGAGCCTCTAGCAGGCTCTTaGCTGCTGAATTTGGCCGCC +
Preference number: 4 (lower is better)
Translates to: PEPHDQLYVLCAGSHKTEPLAGS*LLNLAA
Trigger: GGCGGCCAAATTCAGCAGGCAAGAGCCTGCTAGAGG...CTCAGTTTTATGAGAACCTGCACATAGCACATAAAGTTGATCATGGGGCTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR GCA 90 bp CACCACTCAGCCCAGGCCCCTTTGCTTCAAATCGTGTCTCAGAGGGAGAACAGTAAAGAAACTCAGCTCTaGTCCTTCCTAGCAATGCAA +
Preference number: 4 (lower is better)
Translates to: HHSAQAPLLQIVSQRENSKETQL*SFLAMQ
Trigger: TTGCATTGCTAGGAAGGAGCAGAGCTGAGTTTCTTT...ACTGTTCTCCCTCTGAGACACGATTTGAAGCAAAGGGGCCTGGGCTGAGTGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639495.1
CDS-3UTR GCA 90 bp AGACTAAGAAAGCAGATCTCCCACCACTCAGCCCAGGCCCCTTTGCTTCAAATCACAGTTTCTGTTACCTaGAGTCAGCCACAGTCCGAA +
Preference number: 4 (lower is better)
Translates to: RLRKQISHHSAQAPLLQITVSVT*SQPQSE
Trigger: TTCGGACTGTGGCTGACTGCAGGTAACAGAAACTGT...GATTTGAAGCAAAGGGGCCTGGGCTGAGTGGTGGGAGATCTGCTTTCTTAGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS-3UTR GCA 90 bp TGCCAAAAGGCTCCAGCTGCAGCCTGTCTCCATGAAGGCATAGAAGGGGACCATATTCTAGAGAGAGCCTaGAAAGTACAGATGACCATG +
Preference number: 4 (lower is better)
Translates to: CQKAPAAACLHEGIEGDHILERA*KVQMTM
Trigger: CATGGTCATCTGTACTTTGCAGGCTCTCTCTAGAAT...ATGGTCCCCTTCTATGCCTTCATGGAGACAGGCTGCAGCTGGAGCCTTTTGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS-3UTR GCA 90 bp TGGTCAAGTCACTCTCACAGCCTCTGTCGGCATATACTTAGCAATGACAGGGCTGCCTCAAGTTCTCTCTaGCAGCCTGACATCTCACTT +
Preference number: 4 (lower is better)
Translates to: WSSHSHSLCRHILSNDRAASSSL*QPDISL
Trigger: AAGTGAGATGTCAGGCTGGCAGAGAGAACTTGAGGC...AGCCCTGTCATTGCTAAGTATATGCCGACAGAGGCTGTGAGAGTGACTTGACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638825.1
CDS-3UTR GCA 90 bp ACTCGGACTCGTCCGGCAAACCTGCATGGCGTGAATTTACTCTGTCCGAGGGTGATTATCTTTCAAGGATaGCTCTTCCATGCCAAGAAC +
Preference number: 4 (lower is better)
Translates to: TRTRPANLHGVNLLCPRVIIFQG*LFHAKN
Trigger: GTTCTTGGCATGGAAGAGGCATCCTTGAAAGATAAT...CACCCTCGGACAGAGTAAATTCACGCCATGCAGGTTTGCCGGACGAGTCCGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638825.1
CDS-3UTR GCA 90 bp CACACTCCCTTCTGTGCTTCTGGCACCACAGTAAAGAGACTGTCTTGTCTGCTCATTGACTCACACACCTaGATGCCTTCTGGCTCAGAA +
Preference number: 4 (lower is better)
Translates to: HTPFCASGTTVKRLSCLLIDSHT*MPSGSE
Trigger: TTCTGAGCCAGAAGGCATGCAGGTGTGTGAGTCAAT...GAGCAGACAAGACAGTCTCTTTACTGTGGTGCCAGAAGCACAGAAGGGAGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638825.1
CDS-3UTR CCA 90 bp AATATTCAAGTCTTAGAAGGGGCAGTGATATGTTTCAGTTGTGAGCCAGCCAGAAGGCGGGGGTTCTCCTaGCTGGGTTTGATTTGCGGG +
Preference number: 4 (lower is better)
Translates to: NIQVLEGAVICFSCEPARRRGFS*LGLICG
Trigger: CCCGCAAATCAAACCCAGCCAGGAGAACCCCCGCCT...TCTGGCTGGCTCACAACTGAAACATATCACTGCCCCTTCTAAGACTTGAATATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000639325.2
ENST00000640318.2
CDS-3UTR CCA 90 bp AATATTCAAGTCTTAGAAGGGGCAGTGATATGTTTCAGTTGTGAGCCAGCCAGAGGGTTGAAGCGCTCGTaGGTCTCCAGGCAGAAGGTG +
Preference number: 4 (lower is better)
Translates to: NIQVLEGAVICFSCEPARGLKRS*VSRQKV
Trigger: CACCTTCTGCCTGGAGACCCACGAGCGCTTCAACCC...TCTGGCTGGCTCACAACTGAAACATATCACTGCCCCTTCTAAGACTTGAATATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000639325.2
ENST00000640318.2
CDS-3UTR CCA 90 bp CATTCTAGAGAGAGCCTGCAAAGTACAGATGACCATGGTATACTTGGGAATGTTGGGTTGAAGCGCTCGTaGGTCTCCAGGCAGAAGGTG +
Preference number: 4 (lower is better)
Translates to: HSRESLQSTDDHGILGNVGLKRS*VSRQKV
Trigger: CACCTTCTGCCTGGAGACCCACGAGCGCTTCAACCC...AACATTCCCAAGTATACCATGGTCATCTGTACTTTGCAGGCTCTCTCTAGAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000639325.2
ENST00000640318.2
CDS-3UTR CCA 90 bp AATATTCAAGTCTTAGAAGGGGCAGTGATATGTTTCAGTTGTGAGCCAGCCAGATGGCGCTGGGGTCATTaGGCTGTGCCCCTATCCTCT +
Preference number: 4 (lower is better)
Translates to: NIQVLEGAVICFSCEPARWRWGH*AVPLSS
Trigger: AGAGGATAGGGGCACAGCCCAATGACCCCAGCGCCA...TCTGGCTGGCTCACAACTGAAACATATCACTGCCCCTTCTAAGACTTGAATATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS-3UTR CCA 90 bp AAGTTTCACATTTTGAGTAGCGTGATGAAATCTCATGCCATGTCACTCCATCCCAGTGCGTGTGCTCACTaGCGCTGGGGTCATTGGGCT +
Preference number: 4 (lower is better)
Translates to: KFHILSSVMKSHAMSLHPSACAH*RWGHWA
Trigger: AGCCCAATGACCCCAGCGCCAGTGAGCACACGCACT...GGGATGGAGTGACATGGCATGAGATTTCATCACGCTACTCAAAATGTGAAACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS-3UTR CCA 90 bp CAAGGACAATGGCCTTACCCCCAAGCCCTGAAGACATCTCTCTCTTCTTGCCTCTCTAAAATTTCTTCCTaGGCCAGCGGACATGTGTCA +
Preference number: 4 (lower is better)
Translates to: QGQWPYPQALKTSLSSCLSKISS*ASGHVS
Trigger: TGACACATGTCCGCTGGCCCAGGAAGAAATTTTAGA...GAGGCAAGAAGAGAGAGATGTCTTCAGGGCTTGGGGGTAAGGCCATTGTCCTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675775.1
CDS-3UTR CCA 90 bp TGGGAATGTTGGGTTTATAGAATTAAAGTGGGTTGGTGCTGGAAAGGATCTCAGAGGGCCTGGTCTATGTaGGGGCAGTCTTCGTTCGCC +
Preference number: 4 (lower is better)
Translates to: WECWVYRIKVGWCWKGSQRAWSM*GQSSFA
Trigger: GGCGAACGAAGACTGCCCCCACATAGACCAGGCCCT...CTGAGATCCTTTCCAGCACCAACCCACTTTAATTCTATAAACCCAACATTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000639325.2
ENST00000640318.2
CDS-3UTR CCA 90 bp CATTCTAGAGAGAGCCTGCAAAGTACAGATGACCATGGTATACTTGGGAATGTTTCGGGAGTGAGGGCCTaGTCTATGTGGGGGCAGTCT +
Preference number: 4 (lower is better)
Translates to: HSRESLQSTDDHGILGNVSGVRA*SMWGQS
Trigger: AGACTGCCCCCACATAGACCAGGCCCTCACTCCCGA...AACATTCCCAAGTATACCATGGTCATCTGTACTTTGCAGGCTCTCTCTAGAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000639325.2
ENST00000640318.2
CDS-3UTR CCA 90 bp GAGAGCCTGCAAAGTACAGATGACCATGGTATACTTGGGAATGTTGGGTTTATATCGGGAGTGAGGGCCTaGTCTATGTGGGGGCAGTCT +
Preference number: 4 (lower is better)
Translates to: ESLQSTDDHGILGNVGFISGVRA*SMWGQS
Trigger: AGACTGCCCCCACATAGACCAGGCCCTCACTCCCGA...TATAAACCCAACATTCCCAAGTATACCATGGTCATCTGTACTTTGCAGGCTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000639325.2
ENST00000640318.2
CDS-3UTR CCA 90 bp CATATACTTAGCAATGACAGGGCTTTCTTTGCAAAGATCCTTTCTCATTCCTCCCATTCCTCCACCAGGTaGGCACGCGTACTCCCCGGT +
Preference number: 4 (lower is better)
Translates to: HILSNDRAFFAKILSHSSHSSTR*ARVLPG
Trigger: ACCGGGGAGTACGCGTGCCCACCTGGTGGAGGAATG...GGAGGAATGAGAAAGGATCTTTGCAAAGAAAGCCCTGTCATTGCTAAGTATATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638366.1
CDS-3UTR CCA 90 bp TCCATACGTGGATACATGGGAAGGCTCTGTCTCCCTGAGGAAAAACCAGATGGATCCGGCAAACCTGCATaGCGTGAATTTACTCTGTCC +
Preference number: 4 (lower is better)
Translates to: SIRGYMGRLCLPEEKPDGSGKPA*REFTLS
Trigger: GGACAGAGTAAATTCACGCCATGCAGGTTTGCCGGA...TCCATCTGGTTTTTCCTCAGGGAGACAGAGCCTTCCCATGTATCCACGTATGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000640909.2
CDS-3UTR CCA 90 bp CCAGAGCCCCATGATCAACTTTATGTGCTATGTGCAGGTTCTCATAAAACTGAGGGGACCAGGGCAAAGTaGCTCTCAAAAGCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: PEPHDQLYVLCAGSHKTEGTRAK*LSKAGL
Trigger: CAGCCCTGCTTTTGAGAGCCACTTTGCCCTGGTCCC...CTCAGTTTTATGAGAACCTGCACATAGCACATAAAGTTGATCATGGGGCTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CCA 90 bp ATTCAAGTCTTAGAAGGGGCAGTGATATGTTTCAGTTGTGAGCCAGCCAGAGGACAGGGGAGCCAGCCATaGGCAGCAGAGATATTGACA +
Preference number: 4 (lower is better)
Translates to: IQVLEGAVICFSCEPARGQGSQP*AAEILT
Trigger: TGTCAATATCTCTGCTGCCCATGGCTGGCTCCCCTG...TCCTCTGGCTGGCTCACAACTGAAACATATCACTGCCCCTTCTAAGACTTGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS-3UTR CCA 90 bp GTGGGGATGTGGTTTTCAGTATCTTGCATTACAGGACCACATCTGTGCCCACACAGGAGAACCTTGTCCTaGGTACTCTGCAGCTTAAGG +
Preference number: 4 (lower is better)
Translates to: VGMWFSVSCITGPHLCPHRRTLS*VLCSLR
Trigger: CCTTAAGCTGCAGAGTACCCAGGACAAGGTTCTCCT...GTGTGGGCACAGATGTGGTCCTGTAATGCAAGATACTGAAAACCACATCCCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS-3UTR CCA 90 bp CTGGCTTGTGGATTGATTATCTTTCAAGGATGCCTCTTCCATGCCAAGAACACGCCTGCCTTGGGGTCATaGCCTAAAGTCAACCTGTCC +
Preference number: 4 (lower is better)
Translates to: LACGLIIFQGCLFHAKNTPALGS*PKVNLS
Trigger: GGACAGGTTGACTTTAGGCCATGACCCCAAGGCAGG...CGTGTTCTTGGCATGGAAGAGGCATCCTTGAAAGATAATCAATCCACAAGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638825.1
ENST00000675775.1
CDS-3UTR CCA 90 bp ATGCCAAACGGGGAAGAAGGCAGCCGTGCGAGTTTCCACAATTCTATTTGGAGCAGATCACTTTGCCTTTaGGACTTGACCTGCCATCTG +
Preference number: 4 (lower is better)
Translates to: MPNGEEGSRASFHNSIWSRSLCL*DLTCHL
Trigger: CAGATGGCAGGTCAAGTCCCAAAGGCAAAGTGATCT...GCTCCAAATAGAATTGTGGAAACTCGCACGGCTGCCTTCTTCCCCGTTTGGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638825.1
3UTR CAA 72 bp CTTCTGTGCTTCTGGCACCACAGTAAAGAGACTGTCTaGTCTGCTCTTTGGGGCCACACCAATCAGTCTAAC +
Preference number: 4 (lower is better)
Translates to: LLCFWHHSKETV*SALWGHTNQSN
Trigger: GTTAGACTGATTGGTGTGGCCCCAAAGAGCAGACAAGACAGTCTCTTTACTGTGGTGCCAGAAGCACAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638825.1
CDS-3UTR TCA 90 bp GAGAACAGTAGTTCCCCTTATCTGCAGTTGCACTTTCTACAGTTTCTGTTACCTCGAAATTGTTCACGATaGCGGGCACGGGCATGGCGA +
Preference number: 4 (lower is better)
Translates to: ENSSSPYLQLHFLQFLLPRNCSR*RARAWR
Trigger: TCGCCATGCCCGTGCCCGTCATCGTGAACAATTTCG...AGGTAACAGAAACTGTAGAAAGTGCAACTGCAGATAAGGGGAACTACTGTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS-3UTR TCA 90 bp ATTCAAGTCTTAGAAGGGGCAGTGATATGTTTCAGTTGTGAGCCAGCCAGAGGAGGACATGTGTCACTCTaGGTACTGTGGTGTGGAGAG +
Preference number: 4 (lower is better)
Translates to: IQVLEGAVICFSCEPARGGHVSL*VLWCGE
Trigger: CTCTCCACACCACAGTACTCAGAGTGACACATGTCC...TCCTCTGGCTGGCTCACAACTGAAACATATCACTGCCCCTTCTAAGACTTGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS-3UTR TCA 90 bp TTTCTGCAGAGTGACCATTTGGCCGTAGAAAAAGCTACGTCCGTCCTAGTACAAGGACATGTGTCACTCTaGGTACTGTGGTGTGGAGAG +
Preference number: 4 (lower is better)
Translates to: FLQSDHLAVEKATSVLVQGHVSL*VLWCGE
Trigger: CTCTCCACACCACAGTACTCAGAGTGACACATGTCC...TTGTACTAGGACGGACGTAGCTTTTTCTACGGCCAAATGGTCACTCTGCAGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000640909.2
CDS-3UTR TCA 90 bp TCTGCAGTTGCACTTTCTACAGTTTCTGTTACCTGCAGTCAGCCACAGTCCGAAAAGGCTCTGTCTCCCTaGGGAAAAACCAGATGGAGT +
Preference number: 4 (lower is better)
Translates to: SAVALSTVSVTCSQPQSEKALSP*GKTRWS
Trigger: ACTCCATCTGGTTTTTCCTCAGGGAGACAGAGCCTT...TTCGGACTGTGGCTGACTGCAGGTAACAGAAACTGTAGAAAGTGCAACTGCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS-3UTR TCA 90 bp TGGGGAAACTATGGCAGAGAGGGTAACTTGCTCAAGGAGGAGAACCTTGTCCTGTGTCCAGTGTGTCCATaGTGTATATACTATCCGCCT +
Preference number: 4 (lower is better)
Translates to: WGNYGREGNLLKEENLVLCPVCP*CIYYPP
Trigger: AGGCGGATAGTATATACATCATGGACACACTGGACA...CAGGACAAGGTTCTCCTCCTTGAGCAAGTTACCCTCTCTGCCATAGTTTCCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS-3UTR TCA 90 bp ATTCAAGTCTTAGAAGGGGCAGTGATATGTTTCAGTTGTGAGCCAGCCAGAGGAGATATGTTTCAGTTGTaGGCCAGCCAGAGGACCTGC +
Preference number: 4 (lower is better)
Translates to: IQVLEGAVICFSCEPARGDMFQL*ASQRTC
Trigger: GCAGGTCCTCTGGCTGGCTCACAACTGAAACATATC...TCCTCTGGCTGGCTCACAACTGAAACATATCACTGCCCCTTCTAAGACTTGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS-3UTR TCA 90 bp TGGGGAAACTATGGCAGAGAGGGTAACTTGCTCAAGGAGGAGAACCTTGTCCTGGGCAGTGGGGTAGTCTaGAGACATTCCTATAAAAGA +
Preference number: 4 (lower is better)
Translates to: WGNYGREGNLLKEENLVLGSGVV*RHSYKR
Trigger: TCTTTTATAGGAATGTCTTCAGACTACCCCACTGCC...CAGGACAAGGTTCTCCTCCTTGAGCAAGTTACCCTCTCTGCCATAGTTTCCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS-3UTR TCA 90 bp ACTAAGAAAGCAGATCTCCCACCACTCAGCCCAGGCCCCTTTGCTTCAAATCGTGTAAGTCTTGGGTATTaGCTGAGTCAGCTTGCACTA +
Preference number: 4 (lower is better)
Translates to: TKKADLPPLSPGPFASNRVSLGY*LSQLAL
Trigger: TAGTGCAAGCTGACTCAGTCAATACCCAAGACTTAC...ACGATTTGAAGCAAAGGGGCCTGGGCTGAGTGGTGGGAGATCTGCTTTCTTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS-3UTR TCA 90 bp CTGGCTTGTGGATTGATTATCTTTCAAGGATGCCTCTTCCATGCCAAGAACACGTTTGCCTTTGGGACTTaGCCTGCCATCTGCAAGAGC +
Preference number: 4 (lower is better)
Translates to: LACGLIIFQGCLFHAKNTFAFGT*PAICKS
Trigger: GCTCTTGCAGATGGCAGGTCAAGTCCCAAAGGCAAA...CGTGTTCTTGGCATGGAAGAGGCATCCTTGAAAGATAATCAATCCACAAGCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638825.1
ENST00000675775.1
CDS-3UTR TCA 90 bp CAGGTTTCTACTGAACGCCGTTACAGTTTGGCTCCAACAACGTGTGTGAAAGTCGGCTCAGAATTAGCCTaGGAAAAACAAGTCCTCGGC +
Preference number: 4 (lower is better)
Translates to: QVSTERRYSLAPTTCVKVGSELA*EKQVLG
Trigger: GCCGAGGACTTGTTTTTCTCAGGCTAATTCTGAGCC...GACTTTCACACACGTTGTTGGAGCCAAACTGTAACGGCGTTCAGTAGAAACCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638825.1
CDS-3UTR GCA 90 bp AGCCGTGCGAGTTTCCACAATTCTATTTGGAGCAAAGTTCTCAGTTTCCACGTGAGTAGCGCACTTGCGTaGCATTGCGAACGTTCTCGA +
Preference number: 4 (lower is better)
Translates to: SRASFHNSIWSKVLSFHVSSALA*HCERSR
Trigger: TCGAGAACGTTCGCAATGGCACGCAAGTGCGCTACT...CACGTGGAAACTGAGAACTTTGCTCCAAATAGAATTGTGGAAACTCGCACGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265969.8
CDS-3UTR GCA 90 bp ATGCAAAAGTTTCACATTTTGAGTAGCGTGATGAAATCTCATGCCATGTCACTCCAGCACGTCCTTGGCTaGCTTGGAGGACAGGCCGCT +
Preference number: 4 (lower is better)
Translates to: MQKFHILSSVMKSHAMSLQHVLG*LGGQAA
Trigger: AGCGGCCTGTCCTCCAAGGCAGCCAAGGACGTGCTG...GAGTGACATGGCATGAGATTTCATCACGCTACTCAAAATGTGAAACTTTTGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000639325.2
ENST00000640318.2
CDS-3UTR GCA 90 bp ATTCAAGTCTTAGAAGGGGCAGTGATATGTTTCAGTTGTGAGCCAGCCAGAGGAGGGATGTTCTTAAAGTaGGTGTGCTCACTGGCGCTG +
Preference number: 4 (lower is better)
Translates to: IQVLEGAVICFSCEPARGGMFLK*VCSLAL
Trigger: CAGCGCCAGTGAGCACACGCACTTTAAGAACATCCC...TCCTCTGGCTGGCTCACAACTGAAACATATCACTGCCCCTTCTAAGACTTGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS-3UTR GCA 90 bp ATGCCAAACGGGGAAGAAGGCAGCCGTGCGAGTTTCCACAATTCTATTTGGAGCTACAATGCCAGGTTGTaGCTTAGTAAAGGTGGAGGA +
Preference number: 4 (lower is better)
Translates to: MPNGEEGSRASFHNSIWSYNARL*LSKGGG
Trigger: TCCTCCACCTTTACTAAGGCACAACCTGGCATTGTA...GCTCCAAATAGAATTGTGGAAACTCGCACGGCTGCCTTCTTCCCCGTTTGGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265969.8
CDS-3UTR GCA 90 bp CACGGGAAAGTGGTTGTACACTGGTTGGGATGTCTATATTGCTGCTGCAGTCCCGCAATCCCACAGGAGTaGATGGGTTTTACAGGTTTT +
Preference number: 4 (lower is better)
Translates to: HGKVVVHWLGCLYCCCSPAIPQE*MGFTGF
Trigger: AAAACCTGTAAAACCCATGCACTCCTGTGGGATTGC...GGGACTGCAGCAGCAATATAGACATCCCAACCAGTGTACAACCACTTTCCCGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR GCA 90 bp GGATTGATTATCTTTCAAGGATGCCTCTTCCATGCCAAGAACACGGATCTTGTGCCGGACGATGCACGGTaGTCCAGCTTCCTCTACATA +
Preference number: 4 (lower is better)
Translates to: GLIIFQGCLFHAKNTDLVPDDAR*SSFLYI
Trigger: TATGTAGAGGAAGCTGGAGCACCGTGCATCGTCCGG...CACAAGATCCGTGTTCTTGGCATGGAAGAGGCATCCTTGAAAGATAATCAATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638825.1
ENST00000675775.1
CDS-3UTR GCA 90 bp GTGGGGATGTGGTTTTCAGTATCTTGCATTACAGGACCACATCTGTGCCCACACACAGTTTCTGTTACCTaGAGTCAGCCACAGTCCGAA +
Preference number: 4 (lower is better)
Translates to: VGMWFSVSCITGPHLCPHTVSVT*SQPQSE
Trigger: TTCGGACTGTGGCTGACTGCAGGTAACAGAAACTGT...GTGTGGGCACAGATGTGGTCCTGTAATGCAAGATACTGAAAACCACATCCCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS-3UTR GCA 90 bp ATTTTGAGTAGCGTGATGAAATCTCATGCCATGTCACTCCATCCCACCCAGAACTTGACTGAGTCAGCTTaGACTAGGGAGGCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: ILSSVMKSHAMSLHPTQNLTESA*TREARA
Trigger: TGCTCTGGCCTCCCTAGTGCAAGCTGACTCAGTCAA...GTTCTGGGTGGGATGGAGTGACATGGCATGAGATTTCATCACGCTACTCAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS-3UTR GCA 90 bp GTGGGGATGTGGTTTTCAGTATCTTGCATTACAGGACCACATCTGTGCCCACACTTGTCCTGGGTACTCTaGAGCTTAAGGACTTGGGTA +
Preference number: 4 (lower is better)
Translates to: VGMWFSVSCITGPHLCPHLSWVL*SLRTWV
Trigger: TACCCAAGTCCTTAAGCTGCAGAGTACCCAGGACAA...GTGTGGGCACAGATGTGGTCCTGTAATGCAAGATACTGAAAACCACATCCCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS-3UTR GCA 90 bp AGAGGGCCTAGTGGTAGAAATGGTAAGTCTTGGGTATTGACTGAGTCAGCTTGCGCAGAGAGGGTAACTTaGTCAAGGAGGAGAACCTTG +
Preference number: 4 (lower is better)
Translates to: RGPSGRNGKSWVLTESACAERVT*SRRRTL
Trigger: CAAGGTTCTCCTCCTTGAGCAAGTTACCCTCTCTGC...GCAAGCTGACTCAGTCAATACCCAAGACTTACCATTTCTACCACTAGGCCCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS-3UTR CCA 90 bp GATGACCATGGTATACTTGGGAATGTTGGGTTTATAGAATTAAAGTGGGTTGGTTGTGCTCACTGGCGCTaGGGTCATTGGGCTGTGCCC +
Preference number: 4 (lower is better)
Translates to: DDHGILGNVGFIELKWVGCAHWR*GHWAVP
Trigger: GGGCACAGCCCAATGACCCCAGCGCCAGTGAGCACA...ACCAACCCACTTTAATTCTATAAACCCAACATTCCCAAGTATACCATGGTCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS-3UTR CCA 90 bp ACTAAGAAAGCAGATCTCCCACCACTCAGCCCAGGCCCCTTTGCTTCAAATCGTTCTAAAATTTCTTCCTaGGCCAGCGGACATGTGTCA +
Preference number: 4 (lower is better)
Translates to: TKKADLPPLSPGPFASNRSKISS*ASGHVS
Trigger: TGACACATGTCCGCTGGCCCAGGAAGAAATTTTAGA...ACGATTTGAAGCAAAGGGGCCTGGGCTGAGTGGTGGGAGATCTGCTTTCTTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS-3UTR CCA 90 bp GAGTCCTCAATAGGAACTCCATACGTGGATACATGGGAAGGCTCTGTCTCCCTGTCTAAAATTTCTTCCTaGGCCAGCGGACATGTGTCA +
Preference number: 4 (lower is better)
Translates to: ESSIGTPYVDTWEGSVSLSKISS*ASGHVS
Trigger: TGACACATGTCCGCTGGCCCAGGAAGAAATTTTAGA...CAGGGAGACAGAGCCTTCCCATGTATCCACGTATGGAGTTCCTATTGAGGACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640909.2
CDS-3UTR CCA 90 bp AAGAGAGGGCCTAGTGGTAGAAATGGTAAGTCTTGGGTATTGACTGAGTCAGCTCCATACGTGGATACATaGGAAGGCTCTGTCTCCCTG +
Preference number: 4 (lower is better)
Translates to: KRGPSGRNGKSWVLTESAPYVDT*EGSVSL
Trigger: CAGGGAGACAGAGCCTTCCCATGTATCCACGTATGG...AGCTGACTCAGTCAATACCCAAGACTTACCATTTCTACCACTAGGCCCTCTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS-3UTR CCA 90 bp ATTTTGAGTAGCGTGATGAAATCTCATGCCATGTCACTCCATCCCACCCAGAACCCATACGTGGATACATaGGAAGGCTCTGTCTCCCTG +
Preference number: 4 (lower is better)
Translates to: ILSSVMKSHAMSLHPTQNPYVDT*EGSVSL
Trigger: CAGGGAGACAGAGCCTTCCCATGTATCCACGTATGG...GTTCTGGGTGGGATGGAGTGACATGGCATGAGATTTCATCACGCTACTCAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS-3UTR CCA 90 bp ACTAAGAAAGCAGATCTCCCACCACTCAGCCCAGGCCCCTTTGCTTCAAATCGTCCTTTAAATTGTCAGTaGGATAGGCAGTGGGGTAGT +
Preference number: 4 (lower is better)
Translates to: TKKADLPPLSPGPFASNRPLNCQ*DRQWGS
Trigger: ACTACCCCACTGCCTATCCCACTGACAATTTAAAGG...ACGATTTGAAGCAAAGGGGCCTGGGCTGAGTGGTGGGAGATCTGCTTTCTTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS-3UTR CCA 90 bp GGTCAAGTCACTCTCACAGCCTCTGTCGGCATATACTTAGCAATGACAGGGCTTTCAACCACCTTCTCTTaGCAAGTTCTCGATCTGCCA +
Preference number: 4 (lower is better)
Translates to: GQVTLTASVGIYLAMTGLSTTFS*QVLDLP
Trigger: TGGCAGATCGAGAACTTGCCAAGAGAAGGTGGTTGA...AAGCCCTGTCATTGCTAAGTATATGCCGACAGAGGCTGTGAGAGTGACTTGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638825.1
CDS-3UTR TCA 90 bp CAAAGGATGATGAATTCAGGATCTAAAGGGTGGAATATGAAAAGAAGTCAACAACATCCGGGGAGTCACTaGGCGCCAGGCGCTTGGTCA +
Preference number: 4 (lower is better)
Translates to: QRMMNSGSKGWNMKRSQQHPGSH*APGAWS
Trigger: TGACCAAGCGCCTGGCGCTCAGTGACTCCCCGGATG...TTGTTGACTTCTTTTCATATTCCACCCTTTAGATCCTGAATTCATCATCCTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000639325.2
ENST00000640318.2
CDS-3UTR TCA 90 bp GAAACTATGGCAGAGAGGGTAACTTGCTCAAGGAGGAGAACCTTGTCCTGGGTAAGCTATTGCAAAGGTTaGGTCCTCAATAGGAACTCC +
Preference number: 4 (lower is better)
Translates to: ETMAERVTCSRRRTLSWVSYCKG*VLNRNS
Trigger: GGAGTTCCTATTGAGGACTCAACCTTTGCAATAGCT...TACCCAGGACAAGGTTCTCCTCCTTGAGCAAGTTACCCTCTCTGCCATAGTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS-3UTR TCA 90 bp AATATTCAAGTCTTAGAAGGGGCAGTGATATGTTTCAGTTGTGAGCCAGCCAGATGCAGCCTGTCTCCATaGAGGCATAGAAGGGGACCA +
Preference number: 4 (lower is better)
Translates to: NIQVLEGAVICFSCEPARCSLSP*RHRRGP
Trigger: TGGTCCCCTTCTATGCCTTCATGGAGACAGGCTGCA...TCTGGCTGGCTCACAACTGAAACATATCACTGCCCCTTCTAAGACTTGAATATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS-3UTR GCA 90 bp GATTATCTTTCAAGGATGCCTCTTCCATGCCAAGAACACGGATCTTGTGTAGCTTTCTTAAAGTGCGTGTaGTCACTGGCGCTGGGGTCA +
Preference number: 4 (lower is better)
Translates to: DYLSRMPLPCQEHGSCVAFLKCV*SLALGS
Trigger: TGACCCCAGCGCCAGTGAGCACACGCACTTTAAGAA...AGCTACACAAGATCCGTGTTCTTGGCATGGAAGAGGCATCCTTGAAAGATAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675775.1
CDS-3UTR GCA 90 bp AGACTAAGAAAGCAGATCTCCCACCACTCAGCCCAGGCCCCTTTGCTTCAAATCTTCTTTGGTAGTTTCTaGTTAGCCATGGCTAAGGAG +
Preference number: 4 (lower is better)
Translates to: RLRKQISHHSAQAPLLQIFFGSF*LAMAKE
Trigger: CTCCTTAGCCATGGCTAAGCAGAAACTACCAAAGAA...GATTTGAAGCAAAGGGGCCTGGGCTGAGTGGTGGGAGATCTGCTTTCTTAGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS-3UTR GCA 90 bp ATGCAAAAGTTTCACATTTTGAGTAGCGTGATGAAATCTCATGCCATGTCACTCTTGGGAGATCCCAGCTaGGGTGGCCGCGGAATATGC +
Preference number: 4 (lower is better)
Translates to: MQKFHILSSVMKSHAMSLLGDPS*GGRGIC
Trigger: GCATATTCCGCGGCCACCGCAGCTGGGATCTCCCAA...GAGTGACATGGCATGAGATTTCATCACGCTACTCAAAATGTGAAACTTTTGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS-3UTR GCA 90 bp TTTCCTCTTGATCTTGTGTACAAAAAGGAAGCAATCCATTCCCCATCTCTGTCCGCTGGGTCACAAGCATaGCAAACGGGGAAGAAGGCA +
Preference number: 4 (lower is better)
Translates to: FPLDLVYKKEAIHSPSLSAGSQA*QTGKKA
Trigger: TGCCTTCTTCCCCGTTTGGCATGCTTGTGACCCAGC...GGACAGAGATGGGGAATGGATTGCTTCCTTTTTGTACACAAGATCAAGAGGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000638825.1
CDS-3UTR GCA 90 bp CCAGAGCCCCATGATCAACTTTATGTGCTATGTGCAGGTTCTCATAAAACTGAGTCTCTGAGACCTCACTaGTGTTCTAGGTGCCATGGG +
Preference number: 4 (lower is better)
Translates to: PEPHDQLYVLCAGSHKTESLRPH*CSRCHG
Trigger: CCCATGGCACCTAGAACAGCAGTGAGGTCTCAGAGA...CTCAGTTTTATGAGAACCTGCACATAGCACATAAAGTTGATCATGGGGCTCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR GCA 90 bp GGATGTGGTTTTCAGTATCTTGCATTACAGGACCACATCTGTGCCCACACTGCAGGAGTTGTCCATTTCTaGAGAGTGACCTGCTCTGTT +
Preference number: 4 (lower is better)
Translates to: GCGFQYLALQDHICAHTAGVVHF*RVTCSV
Trigger: AACAGAGCAGGTCACTCTGCAGAAATGGACAACTCC...TGCAGTGTGGGCACAGATGTGGTCCTGTAATGCAAGATACTGAAAACCACATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639495.1
CDS-3UTR GCA 90 bp TGGGGAAACTATGGCAGAGAGGGTAACTTGCTCAAGGAGGAGAACCTTGTCCTGGTAGTTCCCCTTATCTaGAGTTGCACTTTCTACAGT +
Preference number: 4 (lower is better)
Translates to: WGNYGREGNLLKEENLVLVVPLI*SCTFYS
Trigger: ACTGTAGAAAGTGCAACTGCAGATAAGGGGAACTAC...CAGGACAAGGTTCTCCTCCTTGAGCAAGTTACCCTCTCTGCCATAGTTTCCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS-3UTR GCA 90 bp TCTGCAGTTGCACTTTCTACAGTTTCTGTTACCTGCAGTCAGCCACAGTCCGAATTGTCCTGGGTACTCTaGAGCTTAAGGACTTGGGTA +
Preference number: 4 (lower is better)
Translates to: SAVALSTVSVTCSQPQSELSWVL*SLRTWV
Trigger: TACCCAAGTCCTTAAGCTGCAGAGTACCCAGGACAA...TTCGGACTGTGGCTGACTGCAGGTAACAGAAACTGTAGAAAGTGCAACTGCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS-3UTR GCA 90 bp CTGGCTTGTGGATTGATTATCTTTCAAGGATGCCTCTTCCATGCCAAGAACACGGCCTCAAGTTCTCTCTaGCAGCCTGACATCTCACTT +
Preference number: 4 (lower is better)
Translates to: LACGLIIFQGCLFHAKNTASSSL*QPDISL
Trigger: AAGTGAGATGTCAGGCTGGCAGAGAGAACTTGAGGC...CGTGTTCTTGGCATGGAAGAGGCATCCTTGAAAGATAATCAATCCACAAGCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638825.1
ENST00000675775.1
CDS-3UTR GCA 90 bp CTGGCTTGTGGATTGATTATCTTTCAAGGATGCCTCTTCCATGCCAAGAACACGGAGGAGAGATCACTTTaGCTTTGGGACTTGACCTGC +
Preference number: 4 (lower is better)
Translates to: LACGLIIFQGCLFHAKNTEERSL*LWDLTC
Trigger: GCAGGTCAAGTCCCAAAGGCAAAGTGATCTCTCCTC...CGTGTTCTTGGCATGGAAGAGGCATCCTTGAAAGATAATCAATCCACAAGCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638825.1
ENST00000675775.1
CDS-3UTR GCA 90 bp CAAGGACAATGGCCTTACCCCCAAGCCCTGAAGACATCTCTCTCTTCTTGCCTCATTATCTTTCAAGGATaGCTCTTCCATGCCAAGAAC +
Preference number: 4 (lower is better)
Translates to: QGQWPYPQALKTSLSSCLIIFQG*LFHAKN
Trigger: GTTCTTGGCATGGAAGAGGCATCCTTGAAAGATAAT...GAGGCAAGAAGAGAGAGATGTCTTCAGGGCTTGGGGGTAAGGCCATTGTCCTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000638825.1
ENST00000675775.1
CDS-3UTR CCA 90 bp CATTCTAGAGAGAGCCTGCAAAGTACAGATGACCATGGTATACTTGGGAATGTTAGATCCCAGCTGCGGTaGCCGCGGAATATGCTTCTT +
Preference number: 4 (lower is better)
Translates to: HSRESLQSTDDHGILGNVRSQLR*PRNMLL
Trigger: AAGAAGCATATTCCGCGGCCACCGCAGCTGGGATCT...AACATTCCCAAGTATACCATGGTCATCTGTACTTTGCAGGCTCTCTCTAGAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS-3UTR CCA 90 bp TGGGAATGTTGGGTTTATAGAATTAAAGTGGGTTGGTGCTGGAAAGGATCTCAGAGATCCCAGCTGCGGTaGCCGCGGAATATGCTTCTT +
Preference number: 4 (lower is better)
Translates to: WECWVYRIKVGWCWKGSQRSQLR*PRNMLL
Trigger: AAGAAGCATATTCCGCGGCCACCGCAGCTGGGATCT...CTGAGATCCTTTCCAGCACCAACCCACTTTAATTCTATAAACCCAACATTCCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS-3UTR CCA 90 bp TTATTCGAGATGCAGAAGTGTGTCTCTGCAAACCTCCGACTGCTTCAGGAAAACTCCGGCAAACCTGCATaGCGTGAATTTACTCTGTCC +
Preference number: 4 (lower is better)
Translates to: LFEMQKCVSANLRLLQENSGKPA*REFTLS
Trigger: GGACAGAGTAAATTCACGCCATGCAGGTTTGCCGGA...GTTTTCCTGAAGCAGTCGGAGGTTTGCAGAGACACACTTCTGCATCTCGAATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265969.8
CDS-3UTR CCA 90 bp TCTCTGCCATCTACACAGCCTGAAGGGAGCCATGGTAAGGACCAGATCAAAGGCAAAGTGGTTGTACACTaGTTGGGATGTCTATATTGC +
Preference number: 4 (lower is better)
Translates to: SLPSTQPEGSHGKDQIKGKVVVH*LGCLYC
Trigger: GCAATATAGACATCCCAACCAGTGTACAACCACTTT...GCCTTTGATCTGGTCCTTACCATGGCTCCCTTCAGGCTGTGTAGATGGCAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CCA 90 bp CCAGAGCCCCATGATCAACTTTATGTGCTATGTGCAGGTTCTCATAAAACTGAGCCATGGGCAAAGAAATaGGCCTTGAGGGTAGTGCTC +
Preference number: 4 (lower is better)
Translates to: PEPHDQLYVLCAGSHKTEPWAKK*ALRVVL
Trigger: GAGCACTACCCTCAAGGCCCATTTCTTTGCCCATGG...CTCAGTTTTATGAGAACCTGCACATAGCACATAAAGTTGATCATGGGGCTCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CCA 90 bp AGAGGGCCTAGTGGTAGAAATGGTAAGTCTTGGGTATTGACTGAGTCAGCTTGCAAAGTGGGTTGGTGCTaGAAAGGATCTCAGAAGCCA +
Preference number: 4 (lower is better)
Translates to: RGPSGRNGKSWVLTESACKVGWC*KGSQKP
Trigger: TGGCTTCTGAGATCCTTTCCAGCACCAACCCACTTT...GCAAGCTGACTCAGTCAATACCCAAGACTTACCATTTCTACCACTAGGCCCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS-3UTR CCA 90 bp CATTCTAGAGAGAGCCTGCAAAGTACAGATGACCATGGTATACTTGGGAATGTTCAGGGGAGCCAGCCATaGGCAGCAGAGATATTGACA +
Preference number: 4 (lower is better)
Translates to: HSRESLQSTDDHGILGNVQGSQP*AAEILT
Trigger: TGTCAATATCTCTGCTGCCCATGGCTGGCTCCCCTG...AACATTCCCAAGTATACCATGGTCATCTGTACTTTGCAGGCTCTCTCTAGAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS-3UTR CCA 90 bp ATTCAAGTCTTAGAAGGGGCAGTGATATGTTTCAGTTGTGAGCCAGCCAGAGGAAGGAGAACCTTGTCCTaGGTACTCTGCAGCTTAAGG +
Preference number: 4 (lower is better)
Translates to: IQVLEGAVICFSCEPARGRRTLS*VLCSLR
Trigger: CCTTAAGCTGCAGAGTACCCAGGACAAGGTTCTCCT...TCCTCTGGCTGGCTCACAACTGAAACATATCACTGCCCCTTCTAAGACTTGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS-3UTR TCA 90 bp GATGACCATGGTATACTTGGGAATGTTGGGTTTATAGAATTAAAGTGGGTTGGTCGAAATTGTTCACGATaGCGGGCACGGGCATGGCGA +
Preference number: 4 (lower is better)
Translates to: DDHGILGNVGFIELKWVGRNCSR*RARAWR
Trigger: TCGCCATGCCCGTGCCCGTCATCGTGAACAATTTCG...ACCAACCCACTTTAATTCTATAAACCCAACATTCCCAAGTATACCATGGTCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS-3UTR TCA 90 bp CGAGATGCAGAAGTGTGTCTCTGCAAACCTCCGACTGCTTCAGGAAAACAAATCTTTCCACGTGAGAGATaGACTATGAAGGTGAGGTCA +
Preference number: 4 (lower is better)
Translates to: RDAEVCLCKPPTASGKQIFPRER*TMKVRS
Trigger: TGACCTCACCTTCATAGTTCATCTCTCACGTGGAAA...GATTTGTTTTCCTGAAGCAGTCGGAGGTTTGCAGAGACACACTTCTGCATCTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265969.8
CDS-3UTR TCA 90 bp TTACCATTTGGCCGTAGAAAAAGCTACGTCCGTCCTAGTACAATGCCTGGGCCATTCTCAGTTTCCACGTaGGAGATGAACTATGAAGGT +
Preference number: 4 (lower is better)
Translates to: LPFGRRKSYVRPSTMPGPFSVST*EMNYEG
Trigger: ACCTTCATAGTTCATCTCTCACGTGGAAACTGAGAA...TGGCCCAGGCATTGTACTAGGACGGACGTAGCTTTTTCTACGGCCAAATGGTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000638825.1
CDS-3UTR TCA 90 bp CGAGATGCAGAAGTGTGTCTCTGCAAACCTCCGACTGCTTCAGGAAAACAAATCTGTTGTGAGCTGCAGTaGAAGCTTGAGATGTTGCAT +
Preference number: 4 (lower is better)
Translates to: RDAEVCLCKPPTASGKQICCELQ*KLEMLH
Trigger: ATGCAACATCTCAAGCTTTCACTGCAGCTCACAACA...GATTTGTTTTCCTGAAGCAGTCGGAGGTTTGCAGAGACACACTTCTGCATCTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265969.8
CDS-3UTR TCA 90 bp TGGGAATGTTGGGTTTATAGAATTAAAGTGGGTTGGTGCTGGAAAGGATCTCAGGATATGTTTCAGTTGTaGGCCAGCCAGAGGACCTGC +
Preference number: 4 (lower is better)
Translates to: WECWVYRIKVGWCWKGSQDMFQL*ASQRTC
Trigger: GCAGGTCCTCTGGCTGGCTCACAACTGAAACATATC...CTGAGATCCTTTCCAGCACCAACCCACTTTAATTCTATAAACCCAACATTCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS-3UTR TCA 90 bp GGATGTGGTTTTCAGTATCTTGCATTACAGGACCACATCTGTGCCCACACTGCACCTGCAAAGTACAGATaGCCATGGTATACTTGGGAA +
Preference number: 4 (lower is better)
Translates to: GCGFQYLALQDHICAHTAPAKYR*PWYTWE
Trigger: TTCCCAAGTATACCATGGTCATCTGTACTTTGCAGG...TGCAGTGTGGGCACAGATGTGGTCCTGTAATGCAAGATACTGAAAACCACATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS-3UTR TCA 90 bp GGATGTGGTTTTCAGTATCTTGCATTACAGGACCACATCTGTGCCCACACTGCAGGCAGTGGGGTAGTCTaGAGACATTCCTATAAAAGA +
Preference number: 4 (lower is better)
Translates to: GCGFQYLALQDHICAHTAGSGVV*RHSYKR
Trigger: TCTTTTATAGGAATGTCTTCAGACTACCCCACTGCC...TGCAGTGTGGGCACAGATGTGGTCCTGTAATGCAAGATACTGAAAACCACATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS-3UTR GCA 90 bp CATTCTAGAGAGAGCCTGCAAAGTACAGATGACCATGGTATACTTGGGAATGTTAGTAGCGCACTTGCGTaGCATTGCGAACGTTCTCGA +
Preference number: 4 (lower is better)
Translates to: HSRESLQSTDDHGILGNVSSALA*HCERSR
Trigger: TCGAGAACGTTCGCAATGGCACGCAAGTGCGCTACT...AACATTCCCAAGTATACCATGGTCATCTGTACTTTGCAGGCTCTCTCTAGAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000639325.2
ENST00000640318.2
CDS-3UTR GCA 90 bp CATGAAAGAAACTCAGCTCTGCTCCTTCCTAGCAATGCAACGTTGAGTGAATTATTCTTAAAGTGCGTGTaGTCACTGGCGCTGGGGTCA +
Preference number: 4 (lower is better)
Translates to: HERNSALLLPSNATLSELFLKCV*SLALGS
Trigger: TGACCCCAGCGCCAGTGAGCACACGCACTTTAAGAA...TAATTCACTCAACGTTGCATTGCTAGGAAGGAGCAGAGCTGAGTTTCTTTCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639495.1
CDS-3UTR GCA 90 bp TGGGAATGTTGGGTTTATAGAATTAAAGTGGGTTGGTGCTGGAAAGGATCTCAGGGGATGTTCTTAAAGTaGGTGTGCTCACTGGCGCTG +
Preference number: 4 (lower is better)
Translates to: WECWVYRIKVGWCWKGSQGMFLK*VCSLAL
Trigger: CAGCGCCAGTGAGCACACGCACTTTAAGAACATCCC...CTGAGATCCTTTCCAGCACCAACCCACTTTAATTCTATAAACCCAACATTCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS-3UTR GCA 90 bp ATTTTGAGTAGCGTGATGAAATCTCATGCCATGTCACTCCATCCCACCCAGAACCGTGATGAAATCTCATaGCATGTCACTCCATCCCAC +
Preference number: 4 (lower is better)
Translates to: ILSSVMKSHAMSLHPTQNRDEIS*HVTPSH
Trigger: GTGGGATGGAGTGACATGGCATGAGATTTCATCACG...GTTCTGGGTGGGATGGAGTGACATGGCATGAGATTTCATCACGCTACTCAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS-3UTR GCA 90 bp AAGTTTCACATTTTGAGTAGCGTGATGAAATCTCATGCCATGTCACTCCATCCCTTGACTGAGTCAGCTTaGACTAGGGAGGCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: KFHILSSVMKSHAMSLHPLTESA*TREARA
Trigger: TGCTCTGGCCTCCCTAGTGCAAGCTGACTCAGTCAA...GGGATGGAGTGACATGGCATGAGATTTCATCACGCTACTCAAAATGTGAAACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS-3UTR GCA 90 bp TCTCAGAGGGAGAACAGTAGTTCCCCTTATCTGCAGTTGCACTTTCTACAGTTTGCAGAGAGGGTAACTTaGTCAAGGAGGAGAACCTTG +
Preference number: 4 (lower is better)
Translates to: SQRENSSSPYLQLHFLQFAERVT*SRRRTL
Trigger: CAAGGTTCTCCTCCTTGAGCAAGTTACCCTCTCTGC...AAACTGTAGAAAGTGCAACTGCAGATAAGGGGAACTACTGTTCTCCCTCTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS-3UTR CCA 90 bp TTATTCGAGATGCAGAAGTGTGTCTCTGCAAACCTCCGACTGCTTCAGGAAAACATCTCCGCGGGAAAATaGAGAAATCGGCACAAAGCT +
Preference number: 4 (lower is better)
Translates to: LFEMQKCVSANLRLLQENISAGK*RNRHKA
Trigger: AGCTTTGTGCCGATTTCTCCATTTTCCCGCGGAGAT...GTTTTCCTGAAGCAGTCGGAGGTTTGCAGAGACACACTTCTGCATCTCGAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265969.8
CDS-3UTR CCA 90 bp TCTGCAGTTGCACTTTCTACAGTTTCTGTTACCTGCAGTCAGCCACAGTCCGAACAGATTTACAATAATTaGGAGATCCCAGCTGCGGTG +
Preference number: 4 (lower is better)
Translates to: SAVALSTVSVTCSQPQSEQIYNN*EIPAAV
Trigger: CACCGCAGCTGGGATCTCCCAATTATTGTAAATCTG...TTCGGACTGTGGCTGACTGCAGGTAACAGAAACTGTAGAAAGTGCAACTGCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS-3UTR CCA 90 bp GTGGGGATGTGGTTTTCAGTATCTTGCATTACAGGACCACATCTGTGCCCACACCTGAGTACTGTGGTGTaGAGAGTTTACGACAGATTT +
Preference number: 4 (lower is better)
Translates to: VGMWFSVSCITGPHLCPHLSTVV*RVYDRF
Trigger: AAATCTGTCGTAAACTCTCCACACCACAGTACTCAG...GTGTGGGCACAGATGTGGTCCTGTAATGCAAGATACTGAAAACCACATCCCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS-3UTR CCA 90 bp CCCCCAGAAATGTACAGGTTTCTACTGAACGCCGTTACAGTTTGGCTCCAACAAGTGGTCCTGATCTTTTaGTGCTCTACATCCTGGTTT +
Preference number: 4 (lower is better)
Translates to: PPEMYRFLLNAVTVWLQQVVLIF*CSTSWF
Trigger: AAACCAGGATGTAGAGCACCAAAAGATCAGGACCAC...TTGTTGGAGCCAAACTGTAACGGCGTTCAGTAGAAACCTGTACATTTCTGGGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265969.8
CDS-3UTR CCA 90 bp GTGAGGGCCCCAAATACTTCCTCAGCCACAGAGACTGTCCAAGCCAGAACTGTCCTGTTCGTCTATCTATaGTTTAAGATGCTTTCAGAA +
Preference number: 4 (lower is better)
Translates to: VRAPNTSSATETVQARTVLFVYL*FKMLSE
Trigger: TTCTGAAAGCATCTTAAACCATAGATAGACGAACAG...GACAGTTCTGGCTTGGACAGTCTCTGTGGCTGAGGAAGTATTTGGGGCCCTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CCA 90 bp AGACTAAGAAAGCAGATCTCCCACCACTCAGCCCAGGCCCCTTTGCTTCAAATCAGAAATGGTAAGTCTTaGGTATTGACTGAGTCAGCT +
Preference number: 4 (lower is better)
Translates to: RLRKQISHHSAQAPLLQIRNGKS*VLTESA
Trigger: AGCTGACTCAGTCAATACCCAAGACTTACCATTTCT...GATTTGAAGCAAAGGGGCCTGGGCTGAGTGGTGGGAGATCTGCTTTCTTAGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
3UTR CAA 72 bp TCTCAGAGGGAGAACAGTAGTTCCCCTTATCTGCAGTaGCACTTTCTACAGTTTCTGTTACCTGCAGTCAGC +
Preference number: 4 (lower is better)
Translates to: SQRENSSSPYLQ*HFLQFLLPAVS
Trigger: GCTGACTGCAGGTAACAGAAACTGTAGAAAGTGCAACTGCAGATAAGGGGAACTACTGTTCTCCCTCTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS-3UTR TCA 90 bp TTTCCTCTTGATCTTGTGTACAAAAAGGAAGCAATCCATTCCCCATCTCTGTCCAAGGTGAGGTCAATATaGCCGATGACTGACCGACTG +
Preference number: 4 (lower is better)
Translates to: FPLDLVYKKEAIHSPSLSKVRSI*PMTDRL
Trigger: CAGTCGGTCAGTCATCGGTCATATTGACCTCACCTT...GGACAGAGATGGGGAATGGATTGCTTCCTTTTTGTACACAAGATCAAGAGGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000638825.1
CDS-3UTR TCA 90 bp AGACTAAATGCCACCTGTCACGTCAACCTCCTGCTCACCTGGCACTCCTTCTTAGAAAGAGAGAAAATGTaGACAACACGGAAAAGAACA +
Preference number: 4 (lower is better)
Translates to: RLNATCHVNLLLTWHSFLEREKM*TTRKRT
Trigger: TGTTCTTTTCCGTGTTGTTCACATTTTCTCTCTTTC...TAAGAAGGAGTGCCAGGTGAGCAGGAGGTTGACGTGACAGGTGGCATTTAGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR TCA 90 bp AAGTTTCACATTTTGAGTAGCGTGATGAAATCTCATGCCATGTCACTCCATCCCAAGGCTCTGTCTCCCTaGGGAAAAACCAGATGGAGT +
Preference number: 4 (lower is better)
Translates to: KFHILSSVMKSHAMSLHPKALSP*GKTRWS
Trigger: ACTCCATCTGGTTTTTCCTCAGGGAGACAGAGCCTT...GGGATGGAGTGACATGGCATGAGATTTCATCACGCTACTCAAAATGTGAAACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS-3UTR TCA 90 bp TCTAGAGAGAGCCTGCAAAGTACAGATGACCATGGTATACTTGGGAATGTTGGGAGCTATTGCAAAGGTTaGGTCCTCAATAGGAACTCC +
Preference number: 4 (lower is better)
Translates to: SRESLQSTDDHGILGNVGSYCKG*VLNRNS
Trigger: GGAGTTCCTATTGAGGACTCAACCTTTGCAATAGCT...CCCAACATTCCCAAGTATACCATGGTCATCTGTACTTTGCAGGCTCTCTCTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS-3UTR TCA 90 bp ATTTTGAGTAGCGTGATGAAATCTCATGCCATGTCACTCCATCCCACCCAGAACAGCTATTGCAAAGGTTaGGTCCTCAATAGGAACTCC +
Preference number: 4 (lower is better)
Translates to: ILSSVMKSHAMSLHPTQNSYCKG*VLNRNS
Trigger: GGAGTTCCTATTGAGGACTCAACCTTTGCAATAGCT...GTTCTGGGTGGGATGGAGTGACATGGCATGAGATTTCATCACGCTACTCAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS-3UTR TCA 90 bp TTTCTGCAGAGTGACCATTTGGCCGTAGAAAAAGCTACGTCCGTCCTAGTACAAAGCTATTGCAAAGGTTaGGTCCTCAATAGGAACTCC +
Preference number: 4 (lower is better)
Translates to: FLQSDHLAVEKATSVLVQSYCKG*VLNRNS
Trigger: GGAGTTCCTATTGAGGACTCAACCTTTGCAATAGCT...TTGTACTAGGACGGACGTAGCTTTTTCTACGGCCAAATGGTCACTCTGCAGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000640909.2
CDS-3UTR TCA 90 bp GAAACTATGGCAGAGAGGGTAACTTGCTCAAGGAGGAGAACCTTGTCCTGGGTACAATGCAACGTTGAGTaGATTATAACCTCCTTGAAC +
Preference number: 4 (lower is better)
Translates to: ETMAERVTCSRRRTLSWVQCNVE*IITSLN
Trigger: GTTCAAGGAGGTTATAATTCACTCAACGTTGCATTG...TACCCAGGACAAGGTTCTCCTCCTTGAGCAAGTTACCCTCTCTGCCATAGTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639495.1
CDS-3UTR TCA 90 bp TGCCCACACTGCAGAATAACCTTTGTCCATTCTAGAGAGAGCCTGCAAAGTACATTCCAAATCCAGTACTaGCTGTCCCCTAGTGAAGAT +
Preference number: 4 (lower is better)
Translates to: CPHCRITFVHSRESLQSTFQIQY*LSPSED
Trigger: ATCTTCACTAGGGGACAGTCAGTACTGGATTTGGAA...TGTACTTTGCAGGCTCTCTCTAGAATGGACAAAGGTTATTCTGCAGTGTGGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639495.1
CDS-3UTR TCA 90 bp AAGTTTCACATTTTGAGTAGCGTGATGAAATCTCATGCCATGTCACTCCATCCCGGGCAGCAGAGATATTaGCAGAGGGTAAAGGATGAG +
Preference number: 4 (lower is better)
Translates to: KFHILSSVMKSHAMSLHPGQQRY*QRVKDE
Trigger: CTCATCCTTTACCCTCTGTCAATATCTCTGCTGCCC...GGGATGGAGTGACATGGCATGAGATTTCATCACGCTACTCAAAATGTGAAACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS-3UTR TCA 90 bp TCTACAGTTTCTGTTACCTGCAGTCAGCCACAGTCCGAAAATACTCAATGGAAAGGGCAGCAGAGATATTaGCAGAGGGTAAAGGATGAG +
Preference number: 4 (lower is better)
Translates to: STVSVTCSQPQSENTQWKGQQRY*QRVKDE
Trigger: CTCATCCTTTACCCTCTGTCAATATCTCTGCTGCCC...TTTCCATTGAGTATTTTCGGACTGTGGCTGACTGCAGGTAACAGAAACTGTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS-3UTR TCA 90 bp GATGACCATGGTATACTTGGGAATGTTGGGTTTATAGAATTAAAGTGGGTTGGTTGCAGCCTGTCTCCATaGAGGCATAGAAGGGGACCA +
Preference number: 4 (lower is better)
Translates to: DDHGILGNVGFIELKWVGCSLSP*RHRRGP
Trigger: TGGTCCCCTTCTATGCCTTCATGGAGACAGGCTGCA...ACCAACCCACTTTAATTCTATAAACCCAACATTCCCAAGTATACCATGGTCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS-3UTR GCA 90 bp ATATATATAGTTTGGTACTATCTGAGATTTCAGGCATCCCTTGGGGGTCTTGGAGGGATGTTCTTAAAGTaGGTGTGCTCACTGGCGCTG +
Preference number: 4 (lower is better)
Translates to: IYIVWYYLRFQASLGGLGGMFLK*VCSLAL
Trigger: CAGCGCCAGTGAGCACACGCACTTTAAGAACATCCC...TCCAAGACCCCCAAGGGATGCCTGAAATCTCAGATAGTACCAAACTATATATAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000639495.1
CDS-3UTR GCA 90 bp AGAGGGCCTAGTGGTAGAAATGGTAAGTCTTGGGTATTGACTGAGTCAGCTTGCATTAAAGTGGGTTGGTaGTGGAAAGGATCTCAGAAG +
Preference number: 4 (lower is better)
Translates to: RGPSGRNGKSWVLTESACIKVGW*WKGSQK
Trigger: CTTCTGAGATCCTTTCCAGCACCAACCCACTTTAAT...GCAAGCTGACTCAGTCAATACCCAAGACTTACCATTTCTACCACTAGGCCCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS-3UTR GCA 90 bp CAGAGGGAGAACAGTAGTTCCCCTTATCTGCAGTTGCACTTTCTACAGTTTCTGCATCTGTGCCCACACTaGAGAATAACCTTTGTCCAT +
Preference number: 4 (lower is better)
Translates to: QRENSSSPYLQLHFLQFLHLCPH*RITFVH
Trigger: ATGGACAAAGGTTATTCTGCAGTGTGGGCACAGATG...CAGAAACTGTAGAAAGTGCAACTGCAGATAAGGGGAACTACTGTTCTCCCTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS-3UTR GCA 90 bp TGGGAATGTTGGGTTTATAGAATTAAAGTGGGTTGGTGCTGGAAAGGATCTCAGGCAGAGAGGGTAACTTaGTCAAGGAGGAGAACCTTG +
Preference number: 4 (lower is better)
Translates to: WECWVYRIKVGWCWKGSQAERVT*SRRRTL
Trigger: CAAGGTTCTCCTCCTTGAGCAAGTTACCCTCTCTGC...CTGAGATCCTTTCCAGCACCAACCCACTTTAATTCTATAAACCCAACATTCCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS-3UTR GCA 90 bp ATCCTCTACGGTCAGTTACCATTTGGCCGTAGAAAAAGCTACGTCCGTCCTAGTGTTTGCCTTTGCTTTTaGATTCTGTTTTCTCCTGCG +
Preference number: 4 (lower is better)
Translates to: ILYGQLPFGRRKSYVRPSVCLCF*ILFSPA
Trigger: CGCAGGAGAAAACAGAATGCAAAAGCAAAGGCAAAC...ACTAGGACGGACGTAGCTTTTTCTACGGCCAAATGGTAACTGACCGTAGAGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000638825.1
CDS-3UTR CCA 90 bp AAGAGAGGGCCTAGTGGTAGAAATGGTAAGTCTTGGGTATTGACTGAGTCAGCTTCTAAAATTTCTTCCTaGGCCAGCGGACATGTGTCA +
Preference number: 4 (lower is better)
Translates to: KRGPSGRNGKSWVLTESASKISS*ASGHVS
Trigger: TGACACATGTCCGCTGGCCCAGGAAGAAATTTTAGA...AGCTGACTCAGTCAATACCCAAGACTTACCATTTCTACCACTAGGCCCTCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS-3UTR CCA 90 bp TCTACAGTTTCTGTTACCTGCAGTCAGCCACAGTCCGAAAATACTCAATGGAAACAGTGGGATAGGCAGTaGGGTAGTCTGAAGACATTC +
Preference number: 4 (lower is better)
Translates to: STVSVTCSQPQSENTQWKQWDRQ*GSLKTF
Trigger: GAATGTCTTCAGACTACCCCACTGCCTATCCCACTG...TTTCCATTGAGTATTTTCGGACTGTGGCTGACTGCAGGTAACAGAAACTGTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS-3UTR CCA 90 bp CATTCTAGAGAGAGCCTGCAAAGTACAGATGACCATGGTATACTTGGGAATGTTCAGTGGGATAGGCAGTaGGGTAGTCTGAAGACATTC +
Preference number: 4 (lower is better)
Translates to: HSRESLQSTDDHGILGNVQWDRQ*GSLKTF
Trigger: GAATGTCTTCAGACTACCCCACTGCCTATCCCACTG...AACATTCCCAAGTATACCATGGTCATCTGTACTTTGCAGGCTCTCTCTAGAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS-3UTR CCA 90 bp ATTCAAGTCTTAGAAGGGGCAGTGATATGTTTCAGTTGTGAGCCAGCCAGAGGACCTTTAAATTGTCAGTaGGATAGGCAGTGGGGTAGT +
Preference number: 4 (lower is better)
Translates to: IQVLEGAVICFSCEPARGPLNCQ*DRQWGS
Trigger: ACTACCCCACTGCCTATCCCACTGACAATTTAAAGG...TCCTCTGGCTGGCTCACAACTGAAACATATCACTGCCCCTTCTAAGACTTGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS-3UTR TCA 90 bp ATGCAAAAGTTTCACATTTTGAGTAGCGTGATGAAATCTCATGCCATGTCACTCGGACATGTGTCACTCTaGGTACTGTGGTGTGGAGAG +
Preference number: 4 (lower is better)
Translates to: MQKFHILSSVMKSHAMSLGHVSL*VLWCGE
Trigger: CTCTCCACACCACAGTACTCAGAGTGACACATGTCC...GAGTGACATGGCATGAGATTTCATCACGCTACTCAAAATGTGAAACTTTTGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS-3UTR TCA 90 bp CCCCCAGAAATGTACAGGTTTCTACTGAACGCCGTTACAGTTTGGCTCCAACAATGGAAGCTTTCCTCTTaGTCTTGTGTACAAAAAGGA +
Preference number: 4 (lower is better)
Translates to: PPEMYRFLLNAVTVWLQQWKLSS*SCVQKG
Trigger: TCCTTTTTGTACACAAGATCAAGAGGAAAGCTTCCA...TTGTTGGAGCCAAACTGTAACGGCGTTCAGTAGAAACCTGTACATTTCTGGGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000638825.1
CDS-3UTR TCA 90 bp TCGGACCAGAGCCCCATGATCAACTTTATGTGCTATGTGCAGGTTCTCATAAAACCCAAACAGACAACGTaGAAGCTAGAGTCACTTCAA +
Preference number: 4 (lower is better)
Translates to: SDQSPMINFMCYVQVLIKPKQTT*KLESLQ
Trigger: TTGAAGTGACTCTAGCTTTCACGTTGTCTGTTTGGG...TTTTATGAGAACCTGCACATAGCACATAAAGTTGATCATGGGGCTCTGGTCCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR TCA 90 bp AGAGGGCCTAGTGGTAGAAATGGTAAGTCTTGGGTATTGACTGAGTCAGCTTGCCTAGCAATGCAACGTTaGGTGAATTATAACCTCCTT +
Preference number: 4 (lower is better)
Translates to: RGPSGRNGKSWVLTESACLAMQR*VNYNLL
Trigger: AAGGAGGTTATAATTCACTCAACGTTGCATTGCTAG...GCAAGCTGACTCAGTCAATACCCAAGACTTACCATTTCTACCACTAGGCCCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639495.1
CDS-3UTR TCA 90 bp AATATTCAAGTCTTAGAAGGGGCAGTGATATGTTTCAGTTGTGAGCCAGCCAGAGGGACACTAAGTCCATaGAAGAAACTCAGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: NIQVLEGAVICFSCEPARGTLSP*KKLSSA
Trigger: AGCAGAGCTGAGTTTCTTTCATGGACTTAGTGTCCC...TCTGGCTGGCTCACAACTGAAACATATCACTGCCCCTTCTAAGACTTGAATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639495.1
CDS-3UTR TCA 90 bp TCTCAGAGGGAGAACAGTAGTTCCCCTTATCTGCAGTTGCACTTTCTACAGTTTCCTGCAAAGTACAGATaGCCATGGTATACTTGGGAA +
Preference number: 4 (lower is better)
Translates to: SQRENSSSPYLQLHFLQFPAKYR*PWYTWE
Trigger: TTCCCAAGTATACCATGGTCATCTGTACTTTGCAGG...AAACTGTAGAAAGTGCAACTGCAGATAAGGGGAACTACTGTTCTCCCTCTGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS-3UTR TCA 90 bp GATTATCTTTCAAGGATGCCTCTTCCATGCCAAGAACACGGATCTTGTGTAGCTCTCTGGCTTGTGGATTaGTTATCTTTCAAGGATGCC +
Preference number: 4 (lower is better)
Translates to: DYLSRMPLPCQEHGSCVALWLVD*LSFKDA
Trigger: GGCATCCTTGAAAGATAATCAATCCACAAGCCAGAG...AGCTACACAAGATCCGTGTTCTTGGCATGGAAGAGGCATCCTTGAAAGATAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638825.1
ENST00000675775.1
CDS-3UTR GCA 90 bp GATGACCATGGTATACTTGGGAATGTTGGGTTTATAGAATTAAAGTGGGTTGGTTTCTTAAAGTGCGTGTaGTCACTGGCGCTGGGGTCA +
Preference number: 4 (lower is better)
Translates to: DDHGILGNVGFIELKWVGFLKCV*SLALGS
Trigger: TGACCCCAGCGCCAGTGAGCACACGCACTTTAAGAA...ACCAACCCACTTTAATTCTATAAACCCAACATTCCCAAGTATACCATGGTCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS-3UTR GCA 90 bp ATTCAAGTCTTAGAAGGGGCAGTGATATGTTTCAGTTGTGAGCCAGCCAGAGGATTCTTTGGTAGTTTCTaGTTAGCCATGGCTAAGGAG +
Preference number: 4 (lower is better)
Translates to: IQVLEGAVICFSCEPARGFFGSF*LAMAKE
Trigger: CTCCTTAGCCATGGCTAAGCAGAAACTACCAAAGAA...TCCTCTGGCTGGCTCACAACTGAAACATATCACTGCCCCTTCTAAGACTTGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS-3UTR GCA 90 bp CAGAGGGAGAACAGTAGTTCCCCTTATCTGCAGTTGCACTTTCTACAGTTTCTGTTCTTTGGTAGTTTCTaGTTAGCCATGGCTAAGGAG +
Preference number: 4 (lower is better)
Translates to: QRENSSSPYLQLHFLQFLFFGSF*LAMAKE
Trigger: CTCCTTAGCCATGGCTAAGCAGAAACTACCAAAGAA...CAGAAACTGTAGAAAGTGCAACTGCAGATAAGGGGAACTACTGTTCTCCCTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS-3UTR GCA 90 bp ATGCCAAACGGGGAAGAAGGCAGCCGTGCGAGTTTCCACAATTCTATTTGGAGCTATATTTATTCGAGATaGAGAAGTGTGTCTCTGCAA +
Preference number: 4 (lower is better)
Translates to: MPNGEEGSRASFHNSIWSYIYSR*RSVSLQ
Trigger: TTGCAGAGACACACTTCTGCATCTCGAATAAATATA...GCTCCAAATAGAATTGTGGAAACTCGCACGGCTGCCTTCTTCCCCGTTTGGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265969.8
CDS-3UTR GCA 90 bp AGACTAAATGCCACCTGTCACGTCAACCTCCTGCTCACCTGGCACTCCTTCTTAATGATCAACTTTATGTaGTATGTGCAGGTTCTCATA +
Preference number: 4 (lower is better)
Translates to: RLNATCHVNLLLTWHSFLMINFM*YVQVLI
Trigger: TATGAGAACCTGCACATAGCACATAAAGTTGATCAT...TAAGAAGGAGTGCCAGGTGAGCAGGAGGTTGACGTGACAGGTGGCATTTAGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR GCA 90 bp AATATTCAAGTCTTAGAAGGGGCAGTGATATGTTTCAGTTGTGAGCCAGCCAGACGTGATGAAATCTCATaGCATGTCACTCCATCCCAC +
Preference number: 4 (lower is better)
Translates to: NIQVLEGAVICFSCEPARRDEIS*HVTPSH
Trigger: GTGGGATGGAGTGACATGGCATGAGATTTCATCACG...TCTGGCTGGCTCACAACTGAAACATATCACTGCCCCTTCTAAGACTTGAATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS-3UTR GCA 90 bp GAGAACAGTAGTTCCCCTTATCTGCAGTTGCACTTTCTACAGTTTCTGTTACCTACAGTTTCTGTTACCTaGAGTCAGCCACAGTCCGAA +
Preference number: 4 (lower is better)
Translates to: ENSSSPYLQLHFLQFLLPTVSVT*SQPQSE
Trigger: TTCGGACTGTGGCTGACTGCAGGTAACAGAAACTGT...AGGTAACAGAAACTGTAGAAAGTGCAACTGCAGATAAGGGGAACTACTGTTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS-3UTR GCA 90 bp TCTCAGAGGGAGAACAGTAGTTCCCCTTATCTGCAGTTGCACTTTCTACAGTTTCAGATTGTTAAGAGCTaGAAAGGGGTCTCTTTTGGC +
Preference number: 4 (lower is better)
Translates to: SQRENSSSPYLQLHFLQFQIVKS*KGVSFG
Trigger: GCCAAAAGAGACCCCTTTGCAGCTCTTAACAATCTG...AAACTGTAGAAAGTGCAACTGCAGATAAGGGGAACTACTGTTCTCCCTCTGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS-3UTR GCA 90 bp AATATTCAAGTCTTAGAAGGGGCAGTGATATGTTTCAGTTGTGAGCCAGCCAGATTGTCCTGGGTACTCTaGAGCTTAAGGACTTGGGTA +
Preference number: 4 (lower is better)
Translates to: NIQVLEGAVICFSCEPARLSWVL*SLRTWV
Trigger: TACCCAAGTCCTTAAGCTGCAGAGTACCCAGGACAA...TCTGGCTGGCTCACAACTGAAACATATCACTGCCCCTTCTAAGACTTGAATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS-3UTR CCA 90 bp AATATTCAAGTCTTAGAAGGGGCAGTGATATGTTTCAGTTGTGAGCCAGCCAGAATCTCCGCGGGAAAATaGAGAAATCGGCACAAAGCT +
Preference number: 4 (lower is better)
Translates to: NIQVLEGAVICFSCEPARISAGK*RNRHKA
Trigger: AGCTTTGTGCCGATTTCTCCATTTTCCCGCGGAGAT...TCTGGCTGGCTCACAACTGAAACATATCACTGCCCCTTCTAAGACTTGAATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000639325.2
ENST00000640318.2
CDS-3UTR CCA 90 bp AGCCGTGCGAGTTTCCACAATTCTATTTGGAGCAAAGTTCTCAGTTTCCACGTGGAAAGTTGGTCACACTaGATCTACACACCGATAAGA +
Preference number: 4 (lower is better)
Translates to: SRASFHNSIWSKVLSFHVESWSH*IYTPIR
Trigger: TCTTATCGGTGTGTAGATCCAGTGTGACCAACTTTC...CACGTGGAAACTGAGAACTTTGCTCCAAATAGAATTGTGGAAACTCGCACGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000638825.1
CDS-3UTR CCA 90 bp GAGAACAGTAGTTCCCCTTATCTGCAGTTGCACTTTCTACAGTTTCTGTTACCTAAAGTGGGTTGGTGCTaGAAAGGATCTCAGAAGCCA +
Preference number: 4 (lower is better)
Translates to: ENSSSPYLQLHFLQFLLPKVGWC*KGSQKP
Trigger: TGGCTTCTGAGATCCTTTCCAGCACCAACCCACTTT...AGGTAACAGAAACTGTAGAAAGTGCAACTGCAGATAAGGGGAACTACTGTTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
3UTR CAA 72 bp ATGACTGACCGACTGCCCTTTTTGGAAGCTTTCCTCTaGATCTTGTGTACAAAAAGGAAGCAATCCATTCCC +
Preference number: 4 (lower is better)
Translates to: MTDRLPFLEAFL*ILCTKRKQSIP
Trigger: GGGAATGGATTGCTTCCTTTTTGTACACAAGATCAAGAGGAAAGCTTCCAAAAAGGGCAGTCGGTCAGTCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000638825.1
CDS-3UTR TCA 90 bp GAGAGCCTGCAAAGTACAGATGACCATGGTATACTTGGGAATGTTGGGTTTATATGTCCAGTGTGTCCATaGTGTATATACTATCCGCCT +
Preference number: 4 (lower is better)
Translates to: ESLQSTDDHGILGNVGFICPVCP*CIYYPP
Trigger: AGGCGGATAGTATATACATCATGGACACACTGGACA...TATAAACCCAACATTCCCAAGTATACCATGGTCATCTGTACTTTGCAGGCTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS-3UTR TCA 90 bp CATTCTAGAGAGAGCCTGCAAAGTACAGATGACCATGGTATACTTGGGAATGTTTGTCCAGTGTGTCCATaGTGTATATACTATCCGCCT +
Preference number: 4 (lower is better)
Translates to: HSRESLQSTDDHGILGNVCPVCP*CIYYPP
Trigger: AGGCGGATAGTATATACATCATGGACACACTGGACA...AACATTCCCAAGTATACCATGGTCATCTGTACTTTGCAGGCTCTCTCTAGAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS-3UTR TCA 90 bp CATTCTAGAGAGAGCCTGCAAAGTACAGATGACCATGGTATACTTGGGAATGTTCCTGCAAAGTACAGATaGCCATGGTATACTTGGGAA +
Preference number: 4 (lower is better)
Translates to: HSRESLQSTDDHGILGNVPAKYR*PWYTWE
Trigger: TTCCCAAGTATACCATGGTCATCTGTACTTTGCAGG...AACATTCCCAAGTATACCATGGTCATCTGTACTTTGCAGGCTCTCTCTAGAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS-3UTR TCA 90 bp AATATTCAAGTCTTAGAAGGGGCAGTGATATGTTTCAGTTGTGAGCCAGCCAGAGGCAGTGGGGTAGTCTaGAGACATTCCTATAAAAGA +
Preference number: 4 (lower is better)
Translates to: NIQVLEGAVICFSCEPARGSGVV*RHSYKR
Trigger: TCTTTTATAGGAATGTCTTCAGACTACCCCACTGCC...TCTGGCTGGCTCACAACTGAAACATATCACTGCCCCTTCTAAGACTTGAATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS-3UTR TCA 90 bp CAAAGGATGATGAATTCAGGATCTAAAGGGTGGAATATGAAAAGAAGTCAACAATGCAGCCTGTCTCCATaGAGGCATAGAAGGGGACCA +
Preference number: 4 (lower is better)
Translates to: QRMMNSGSKGWNMKRSQQCSLSP*RHRRGP
Trigger: TGGTCCCCTTCTATGCCTTCATGGAGACAGGCTGCA...TTGTTGACTTCTTTTCATATTCCACCCTTTAGATCCTGAATTCATCATCCTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS-3UTR GCA 90 bp ATTCAAGTCTTAGAAGGGGCAGTGATATGTTTCAGTTGTGAGCCAGCCAGAGGATGGTTTTCAGTATCTTaGATTACAGGACCACATCTG +
Preference number: 4 (lower is better)
Translates to: IQVLEGAVICFSCEPARGWFSVS*ITGPHL
Trigger: CAGATGTGGTCCTGTAATGCAAGATACTGAAAACCA...TCCTCTGGCTGGCTCACAACTGAAACATATCACTGCCCCTTCTAAGACTTGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS-3UTR GCA 90 bp TGGGAATGTTGGGTTTATAGAATTAAAGTGGGTTGGTGCTGGAAAGGATCTCAGCAGATTGTTAAGAGCTaGAAAGGGGTCTCTTTTGGC +
Preference number: 4 (lower is better)
Translates to: WECWVYRIKVGWCWKGSQQIVKS*KGVSFG
Trigger: GCCAAAAGAGACCCCTTTGCAGCTCTTAACAATCTG...CTGAGATCCTTTCCAGCACCAACCCACTTTAATTCTATAAACCCAACATTCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS-3UTR CCA 90 bp CAAAGGATGATGAATTCAGGATCTAAAGGGTGGAATATGAAAAGAAGTCAACAAAGATCCCAGCTGCGGTaGCCGCGGAATATGCTTCTT +
Preference number: 4 (lower is better)
Translates to: QRMMNSGSKGWNMKRSQQRSQLR*PRNMLL
Trigger: AAGAAGCATATTCCGCGGCCACCGCAGCTGGGATCT...TTGTTGACTTCTTTTCATATTCCACCCTTTAGATCCTGAATTCATCATCCTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS-3UTR CCA 90 bp AATATTCAAGTCTTAGAAGGGGCAGTGATATGTTTCAGTTGTGAGCCAGCCAGACAGATTTACAATAATTaGGAGATCCCAGCTGCGGTG +
Preference number: 4 (lower is better)
Translates to: NIQVLEGAVICFSCEPARQIYNN*EIPAAV
Trigger: CACCGCAGCTGGGATCTCCCAATTATTGTAAATCTG...TCTGGCTGGCTCACAACTGAAACATATCACTGCCCCTTCTAAGACTTGAATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS-3UTR CCA 90 bp GATTATCTTTCAAGGATGCCTCTTCCATGCCAAGAACACGGATCTTGTGTAGCTCTGAGTACTGTGGTGTaGAGAGTTTACGACAGATTT +
Preference number: 4 (lower is better)
Translates to: DYLSRMPLPCQEHGSCVALSTVV*RVYDRF
Trigger: AAATCTGTCGTAAACTCTCCACACCACAGTACTCAG...AGCTACACAAGATCCGTGTTCTTGGCATGGAAGAGGCATCCTTGAAAGATAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675775.1
CDS-3UTR CCA 90 bp TGGGAATGTTGGGTTTATAGAATTAAAGTGGGTTGGTGCTGGAAAGGATCTCAGCCTTTAAATTGTCAGTaGGATAGGCAGTGGGGTAGT +
Preference number: 4 (lower is better)
Translates to: WECWVYRIKVGWCWKGSQPLNCQ*DRQWGS
Trigger: ACTACCCCACTGCCTATCCCACTGACAATTTAAAGG...CTGAGATCCTTTCCAGCACCAACCCACTTTAATTCTATAAACCCAACATTCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS-3UTR CCA 90 bp AGTAGCGTGATGAAATCTCATGCCATGTCACTCCATCCCACCCAGAACATGAATAGAAATGGTAAGTCTTaGGTATTGACTGAGTCAGCT +
Preference number: 4 (lower is better)
Translates to: SSVMKSHAMSLHPTQNMNRNGKS*VLTESA
Trigger: AGCTGACTCAGTCAATACCCAAGACTTACCATTTCT...ATTCATGTTCTGGGTGGGATGGAGTGACATGGCATGAGATTTCATCACGCTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639495.1
3UTR CAA 72 bp AGAAATGTACAGGTTTCTACTGAACGCCGTTACAGTTaGGCTCCAACAACGTGTGTGAAAGTCAAGAGCTTT +
Preference number: 4 (lower is better)
Translates to: RNVQVSTERRYS*APTTCVKVKSF
Trigger: AAAGCTCTTGACTTTCACACACGTTGTTGGAGCCAAACTGTAACGGCGTTCAGTAGAAACCTGTACATTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000638825.1
CDS-3UTR TCA 90 bp AAGAAGGCAGCCGTGCGAGTTTCCACAATTCTATTTGGAGCAAAGTTCTCAGTTTACACACCGATAAGATaGGAGAATCAACCTAGACTA +
Preference number: 4 (lower is better)
Translates to: KKAAVRVSTILFGAKFSVYTPIR*ENQPRL
Trigger: TAGTCTAGGTTGATTCTCTCATCTTATCGGTGTGTA...AACTGAGAACTTTGCTCCAAATAGAATTGTGGAAACTCGCACGGCTGCCTTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000638825.1
CDS-3UTR TCA 90 bp TCTGTCGGCATATACTTAGCAATGACAGGGCTTTCTTTGCAAAGATCCTTTCTCGGTCATCTGTTCCTTTaGAATCCCTGCTCTGTTAAT +
Preference number: 4 (lower is better)
Translates to: SVGIYLAMTGLSLQRSFLGHLFL*NPCSVN
Trigger: ATTAACAGAGCAGGGATTTCAAAGGAACAGATGACC...GAGAAAGGATCTTTGCAAAGAAAGCCCTGTCATTGCTAAGTATATGCCGACAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638366.1
CDS-3UTR TCA 90 bp AAGTTTCACATTTTGAGTAGCGTGATGAAATCTCATGCCATGTCACTCCATCCCTCCATTTCTGCAGAGTaGCCTGCTCTGTTAATTTCT +
Preference number: 4 (lower is better)
Translates to: KFHILSSVMKSHAMSLHPSISAE*PALLIS
Trigger: AGAAATTAACAGAGCAGGTCACTCTGCAGAAATGGA...GGGATGGAGTGACATGGCATGAGATTTCATCACGCTACTCAAAATGTGAAACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639495.1
CDS-3UTR GCA 90 bp TGGGAATGTTGGGTTTATAGAATTAAAGTGGGTTGGTGCTGGAAAGGATCTCAGATTCTAGAGAGAGCCTaGAAAGTACAGATGACCATG +
Preference number: 4 (lower is better)
Translates to: WECWVYRIKVGWCWKGSQILERA*KVQMTM
Trigger: CATGGTCATCTGTACTTTGCAGGCTCTCTCTAGAAT...CTGAGATCCTTTCCAGCACCAACCCACTTTAATTCTATAAACCCAACATTCCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS-3UTR GCA 90 bp CATGAAAGAAACTCAGCTCTGCTCCTTCCTAGCAATGCAACGTTGAGTGAATTAATTCTAGAGAGAGCCTaGAAAGTACAGATGACCATG +
Preference number: 4 (lower is better)
Translates to: HERNSALLLPSNATLSELILERA*KVQMTM
Trigger: CATGGTCATCTGTACTTTGCAGGCTCTCTCTAGAAT...TAATTCACTCAACGTTGCATTGCTAGGAAGGAGCAGAGCTGAGTTTCTTTCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639495.1
CDS-3UTR CCA 90 bp TGGGAATGTTGGGTTTATAGAATTAAAGTGGGTTGGTGCTGGAAAGGATCTCAGCTGAGTACTGTGGTGTaGAGAGTTTACGACAGATTT +
Preference number: 4 (lower is better)
Translates to: WECWVYRIKVGWCWKGSQLSTVV*RVYDRF
Trigger: AAATCTGTCGTAAACTCTCCACACCACAGTACTCAG...CTGAGATCCTTTCCAGCACCAACCCACTTTAATTCTATAAACCCAACATTCCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
3UTR CAA 72 bp TTCTTTTCATTATTGTTGTTCAGGGTAATCATACAGTaGCAGGGGGTTGGTGGGTTTGGTTTGCTGGGTTTT +
Preference number: 4 (lower is better)
Translates to: FFSLLLFRVIIQ*QGVGGFGLLGF
Trigger: AAAACCCAGCAAACCAAACCCACCAACCCCCTGCAACTGTATGATTACCCTGAACAACAATAATGAAAAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000638825.1
CDS-3UTR GCA 90 bp GAGAACAGTAGTTCCCCTTATCTGCAGTTGCACTTTCTACAGTTTCTGTTACCTTGGTTTTCAGTATCTTaGATTACAGGACCACATCTG +
Preference number: 4 (lower is better)
Translates to: ENSSSPYLQLHFLQFLLPWFSVS*ITGPHL
Trigger: CAGATGTGGTCCTGTAATGCAAGATACTGAAAACCA...AGGTAACAGAAACTGTAGAAAGTGCAACTGCAGATAAGGGGAACTACTGTTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS-3UTR GCA 90 bp AATATTCAAGTCTTAGAAGGGGCAGTGATATGTTTCAGTTGTGAGCCAGCCAGATGGTTTTCAGTATCTTaGATTACAGGACCACATCTG +
Preference number: 4 (lower is better)
Translates to: NIQVLEGAVICFSCEPARWFSVS*ITGPHL
Trigger: CAGATGTGGTCCTGTAATGCAAGATACTGAAAACCA...TCTGGCTGGCTCACAACTGAAACATATCACTGCCCCTTCTAAGACTTGAATATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS-3UTR GCA 90 bp GATGACCATGGTATACTTGGGAATGTTGGGTTTATAGAATTAAAGTGGGTTGGTCAGATTGTTAAGAGCTaGAAAGGGGTCTCTTTTGGC +
Preference number: 4 (lower is better)
Translates to: DDHGILGNVGFIELKWVGQIVKS*KGVSFG
Trigger: GCCAAAAGAGACCCCTTTGCAGCTCTTAACAATCTG...ACCAACCCACTTTAATTCTATAAACCCAACATTCCCAAGTATACCATGGTCATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS-3UTR CCA 90 bp GATGACCATGGTATACTTGGGAATGTTGGGTTTATAGAATTAAAGTGGGTTGGTATAAAGATAATACTCTaGCTCTCCTACTCCCCCGCT +
Preference number: 4 (lower is better)
Translates to: DDHGILGNVGFIELKWVGIKIIL*LSYSPA
Trigger: AGCGGGGGAGTAGGAGAGCCAGAGTATTATCTTTAT...ACCAACCCACTTTAATTCTATAAACCCAACATTCCCAAGTATACCATGGTCATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000639495.1
CDS-3UTR CCA 90 bp AATATTCAAGTCTTAGAAGGGGCAGTGATATGTTTCAGTTGTGAGCCAGCCAGAAGAAATGGTAAGTCTTaGGTATTGACTGAGTCAGCT +
Preference number: 4 (lower is better)
Translates to: NIQVLEGAVICFSCEPARRNGKS*VLTESA
Trigger: AGCTGACTCAGTCAATACCCAAGACTTACCATTTCT...TCTGGCTGGCTCACAACTGAAACATATCACTGCCCCTTCTAAGACTTGAATATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS-3UTR CCA 90 bp ATTCAAGTCTTAGAAGGGGCAGTGATATGTTTCAGTTGTGAGCCAGCCAGAGGATCAGGATCTAAAGGGTaGAATATGAAAAGAAGTCAA +
Preference number: 4 (lower is better)
Translates to: IQVLEGAVICFSCEPARGSGSKG*NMKRSQ
Trigger: TTGACTTCTTTTCATATTCCACCCTTTAGATCCTGA...TCCTCTGGCTGGCTCACAACTGAAACATATCACTGCCCCTTCTAAGACTTGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS-3UTR CCA 90 bp ATATATATAGTTTGGTACTATCTGAGATTTCAGGCATCCCTTGGGGGTCTTGGAGATGTCTTTTTAATCTaGCTCCTTAAACTGTCCAGG +
Preference number: 4 (lower is better)
Translates to: IYIVWYYLRFQASLGGLGDVFLI*LLKLSR
Trigger: CCTGGACAGTTTAAGGAGCCAGATTAAAAAGACATC...TCCAAGACCCCCAAGGGATGCCTGAAATCTCAGATAGTACCAAACTATATATAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000639495.1
CDS-3UTR CCA 90 bp CAAAGGATGATGAATTCAGGATCTAAAGGGTGGAATATGAAAAGAAGTCAACAACAGATTTACAATAATTaGGAGATCCCAGCTGCGGTG +
Preference number: 4 (lower is better)
Translates to: QRMMNSGSKGWNMKRSQQQIYNN*EIPAAV
Trigger: CACCGCAGCTGGGATCTCCCAATTATTGTAAATCTG...TTGTTGACTTCTTTTCATATTCCACCCTTTAGATCCTGAATTCATCATCCTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS-3UTR CCA 90 bp CAAAGGATGATGAATTCAGGATCTAAAGGGTGGAATATGAAAAGAAGTCAACAATCTAAAATTTCTTCCTaGGCCAGCGGACATGTGTCA +
Preference number: 4 (lower is better)
Translates to: QRMMNSGSKGWNMKRSQQSKISS*ASGHVS
Trigger: TGACACATGTCCGCTGGCCCAGGAAGAAATTTTAGA...TTGTTGACTTCTTTTCATATTCCACCCTTTAGATCCTGAATTCATCATCCTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS-3UTR GCA 90 bp CAAAGGATGATGAATTCAGGATCTAAAGGGTGGAATATGAAAAGAAGTCAACAAATTAAAGTGGGTTGGTaGTGGAAAGGATCTCAGAAG +
Preference number: 4 (lower is better)
Translates to: QRMMNSGSKGWNMKRSQQIKVGW*WKGSQK
Trigger: CTTCTGAGATCCTTTCCAGCACCAACCCACTTTAAT...TTGTTGACTTCTTTTCATATTCCACCCTTTAGATCCTGAATTCATCATCCTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS-3UTR CCA 90 bp ATATATATAGTTTGGTACTATCTGAGATTTCAGGCATCCCTTGGGGGTCTTGGATCAGGATCTAAAGGGTaGAATATGAAAAGAAGTCAA +
Preference number: 4 (lower is better)
Translates to: IYIVWYYLRFQASLGGLGSGSKG*NMKRSQ
Trigger: TTGACTTCTTTTCATATTCCACCCTTTAGATCCTGA...TCCAAGACCCCCAAGGGATGCCTGAAATCTCAGATAGTACCAAACTATATATAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000639495.1
3UTR CAA 72 bp ACCATGATACAAAATTTATTTCATGCTAGAATCGCTTaGCATAACATTGGGCATGCAGGTTTTTACTCTGAA +
Preference number: 4 (lower is better)
Translates to: TMIQNLFHARIA*HNIGHAGFYSE
Trigger: TTCAGAGTAAAAACCTGCATGCCCAATGTTATGCAAAGCGATTCTAGCATGAAATAAATTTTGTATCATGGT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265969.8
CDS-3UTR CCA 90 bp CAAAGGATGATGAATTCAGGATCTAAAGGGTGGAATATGAAAAGAAGTCAACAATCAGGATCTAAAGGGTaGAATATGAAAAGAAGTCAA +
Preference number: 4 (lower is better)
Translates to: QRMMNSGSKGWNMKRSQQSGSKG*NMKRSQ
Trigger: TTGACTTCTTTTCATATTCCACCCTTTAGATCCTGA...TTGTTGACTTCTTTTCATATTCCACCCTTTAGATCCTGAATTCATCATCCTTTG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS GCA 90 bp CGCGCTCTCGGCGCGGGGGAGATGGATGCCGCCTGCCTTCCTCCCTaGGTGGCCGGGCTGCAGCTCGGGACGCAGGGCGGGCTCCGGCCC +
Preference number: 5 (lower is better)
Translates to: RALGAGEMDAACLPP*VAGLQLGTQGGLRP
Trigger: GGGCCGGAGCCCGCCCTGCGTCCCGAGCTGCAGCCCGGCCACGCAGGGAGGAAGGCAGGCGGCATCCATCTCCCCCGCGCCGAGAGCGCG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265969.8
ENST00000379472.4
ENST00000639325.2
ENST00000640318.2
ENST00000640909.2
ENST00000675775.1
CDS CCA 90 bp CTCTCGGCGCGGGGGAGATGGATGCCGCCTGCCTTCCTCCCTGCGTaGCCGGGCTGCAGCTCGGGACGCAGGGCGGGCTCCGGCCCCCTC +
Preference number: 5 (lower is better)
Translates to: LSARGRWMPPAFLPA*PGCSSGRRAGSGPL
Trigger: GAGGGGGCCGGAGCCCGCCCTGCGTCCCGAGCTGCAGCCCGGCCACGCAGGGAGGAAGGCAGGCGGCATCCATCTCCCCCGCGCCGAGAG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000265969.8
ENST00000379472.4
ENST00000639325.2
ENST00000640318.2
ENST00000640909.2
ENST00000675775.1
CDS TCA 90 bp GGGTTCCGCTGGGCTGCGCTCGGACTTGGGCTCCCGCGGCGGTGCTaGAGGGACAGCTCCCGGCGGTCGCGGAGCTGCACGGGGCCAGGC +
Preference number: 5 (lower is better)
Translates to: GFRWAALGLGLPRRC*RDSSRRSRSCTGPG
Trigger: GCCTGGCCCCGTGCAGCTCCGCGACCGCCGGGAGCTGTCCCTTCAGCACCGCCGCGGGAGCCCAAGTCCGAGCGCAGCCCAGCGGAACCC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265969.8
ENST00000379472.4
ENST00000639325.2
ENST00000640318.2
ENST00000640909.2
ENST00000675775.1
CDS GCA 90 bp CGGGGGAGATGGATGCCGCCTGCCTTCCTCCCTGCGTGGCCGGGCTaGAGCTCGGGACGCAGGGCGGGCTCCGGCCCCCTCCCTCTCTCC +
Preference number: 5 (lower is better)
Translates to: RGRWMPPAFLPAWPG*SSGRRAGSGPLPLS
Trigger: GGAGAGAGGGAGGGGGCCGGAGCCCGCCCTGCGTCCCGAGCTGCAGCCCGGCCACGCAGGGAGGAAGGCAGGCGGCATCCATCTCCCCCG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000265969.8
ENST00000379472.4
ENST00000639325.2
ENST00000640318.2
ENST00000640909.2
ENST00000675775.1
CDS GCA 90 bp TGTGAGGTGGTCGCCGCGGCGCGCTCTCGGCGCGGGGGAGATGGATaGCGCCTGCCTTCCTCCCTGCGTGGCCGGGCTGCAGCTCGGGAC +
Preference number: 5 (lower is better)
Translates to: CEVVAAARSRRGGDG*RLPSSLRGRAAARD
Trigger: GTCCCGAGCTGCAGCCCGGCCACGCAGGGAGGAAGGCAGGCGGCATCCATCTCCCCCGCGCCGAGAGCGCGCCGCGGCGACCACCTCACA
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265969.8
ENST00000379472.4
ENST00000639325.2
ENST00000640318.2
ENST00000640909.2
ENST00000675775.1
CDS GCA 90 bp CTGGGTTTGATTTGCGGGGCCGGCGGGCACTGGCTCCGGTGCCTCTaGGCCCCGCACTCCGCTCCTCGCTTCGGGCAGGCGGTGGGCGCT +
Preference number: 5 (lower is better)
Translates to: LGLICGAGGHWLRCL*APHSAPRFGQAVGA
Trigger: AGCGCCCACCGCCTGCCCGAAGCGAGGAGCGGAGTGCGGGGCGCAGAGGCACCGGAGCCAGTGCCCGCCGGCCCCGCAAATCAAACCCAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265969.8
ENST00000379472.4
ENST00000639325.2
ENST00000640318.2
ENST00000640909.2
ENST00000675775.1
CDS CCA 90 bp GGAGGGGAGGAGACAGGGCCGGGAAATTCGCGCTCCTCTGTGAGGTaGTCGCCGCGGCGCGCTCTCGGCGCGGGGGAGATGGATGCCGCC +
Preference number: 5 (lower is better)
Translates to: GGEETGPGNSRSSVR*SPRRALGAGEMDAA
Trigger: GGCGGCATCCATCTCCCCCGCGCCGAGAGCGCGCCGCGGCGACCACCTCACAGAGGAGCGCGAATTTCCCGGCCCTGTCTCCTCCCCTCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265969.8
ENST00000379472.4
ENST00000639325.2
ENST00000640318.2
ENST00000640909.2
ENST00000675775.1
CDS TCA 90 bp ACCCGGGGTGTTGCTCGTGCGGCTAACGCCGAGCGCTGCTCTCCGTaGGCCCGGGCTCGAGCTGGGGTTCCGCTGGGCTGCGCTCGGACT +
Preference number: 5 (lower is better)
Translates to: TRGVARAANAERCSP*ARARAGVPLGCART
Trigger: AGTCCGAGCGCAGCCCAGCGGAACCCCAGCTCGAGCCCGGGCTCACGGAGAGCAGCGCTCGGCGTTAGCCGCACGAGCAACACCCCGGGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265969.8
ENST00000379472.4
ENST00000639325.2
ENST00000640318.2
ENST00000640909.2
ENST00000675775.1
CDS TCA 90 bp GCCAGCGGCGCCAAAAGCCGCCAGGCCGGCCATCCGGGGAGTCACTaGGCGCCAGGCGCTTGGTCATCTCCAGCTCGTCCTCGCCGTCGC +
Preference number: 5 (lower is better)
Translates to: ASGAKSRQAGHPGSH*APGAWSSPARPRRR
Trigger: GCGACGGCGAGGACGAGCTGGAGATGACCAAGCGCCTGGCGCTCAGTGACTCCCCGGATGGCCGGCCTGGCGGCTTTTGGCGCCGCTGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265969.8
ENST00000379472.4
ENST00000639325.2
ENST00000640318.2
ENST00000640909.2
ENST00000675775.1
CDS-3UTR CAA 90 bp ACCCATCTGCAGGAGCGCGAGGCGGCCCGGACGATGCACGGTGCTCCAGCTTCCGCCTCTCCGGGCGCTTaGTCGGGTGCCGGTCCAGGG +
Preference number: 5 (lower is better)
Translates to: THLQEREAARTMHGAPASASPGA*SGAGPG
Trigger: CCCTGGACCGGCACCCGACAAAGCGCCCGGAGAGGC...GGAAGCTGGAGCACCGTGCATCGTCCGGGCCGCCTCGCGCTCCTGCAGATGGGT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675775.1
CDS-3UTR CAA 90 bp GCAAGAGCAGCCTGGGGGAGTCAAGGCTCCTCCTGCATTCCTGGGTACCCCTGCGGGCTGCGCTCGGACTaGGGCTCCCGCGGCGGTGCT +
Preference number: 5 (lower is better)
Translates to: ARAAWGSQGSSCIPGYPCGLRSD*GSRGGA
Trigger: AGCACCGCCGCGGGAGCCCAAGTCCGAGCGCAGCCC...GCAGGGGTACCCAGGAATGCAGGAGGAGCCTTGACTCCCCCAGGCTGCTCTTGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675775.1
CDS GCA 90 bp CCAAGCCTCTCCGGGCGCTTTGTCGGGTGCCGGTCCAGGGGAATGTaGGCGGGATCCCAGGGGTCTCTAGGAGCCAGATGTGGGAGGGAG +
Preference number: 5 (lower is better)
Translates to: PSLSGRFVGCRSRGM*AGSQGSLGARCGRE
Trigger: CTCCCTCCCACATCTGGCTCCTAGAGACCCCTGGGATCCCGCGCACATTCCCCTGGACCGGCACCCGACAAAGCGCCCGGAGAGGCTTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265969.8
ENST00000379472.4
ENST00000639325.2
ENST00000640318.2
ENST00000640909.2
ENST00000675775.1
CDS-3UTR CAA 90 bp CTGCATGGCGTGAATTTACTCTGTCCGAGGGTGAGGAGGGGCTGCAGGTCCACCGGGCTGCGCTCGGACTaGGGCTCCCGCGGCGGTGCT +
Preference number: 5 (lower is better)
Translates to: LHGVNLLCPRVRRGCRSTGLRSD*GSRGGA
Trigger: AGCACCGCCGCGGGAGCCCAAGTCCGAGCGCAGCCC...GGTGGACCTGCAGCCCCTCCTCACCCTCGGACAGAGTAAATTCACGCCATGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000640909.2
CDS-3UTR CAA 90 bp GGACTTGACCTGCCATCTGCAAGAGCAGCCTGGGGGAGTCAAGGCTCCTCCTGCGGGGCACCCGGGGTGTaGCTCGTGCGGCTAACGCCG +
Preference number: 5 (lower is better)
Translates to: GLDLPSARAAWGSQGSSCGAPGV*LVRLTP
Trigger: CGGCGTTAGCCGCACGAGCAACACCCCGGGTGCCCC...GCAGGAGGAGCCTTGACTCCCCCAGGCTGCTCTTGCAGATGGCAGGTCAAGTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000675775.1
CDS-3UTR CAA 90 bp TCTGCAAGAGCAGCCTGGGGGAGTCAAGGCTCCTCCTGCATTCCTGGGTACCCCGCGTCGTCGGCGCTGTaGTCCAGAGGAGCGCCGCCG +
Preference number: 5 (lower is better)
Translates to: SARAAWGSQGSSCIPGYPASSAL*SRGAPP
Trigger: CGGCGGCGCTCCTCTGGACAACAGCGCCGACGACGC...GGGGTACCCAGGAATGCAGGAGGAGCCTTGACTCCCCCAGGCTGCTCTTGCAGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675775.1
CDS-3UTR CAA 90 bp AGTCGCAAAGGGGAACATCAGGCCCATCCATGGCCGGTGCCAAGGATGGGACCCCCAGTGCCTGGAGCCTaGAGCTCGGGCGCCCTGGGC +
Preference number: 5 (lower is better)
Translates to: SRKGEHQAHPWPVPRMGPPVPGA*SSGALG
Trigger: GCCCAGGGCGCCCGAGCTCAAGGCTCCAGGCACTGG...GGGTCCCATCCTTGGCACCGGCCATGGATGGGCCTGATGTTCCCCTTTGCGACT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638825.1
CDS-3UTR CAA 90 bp GAAAAAGCTACGTCCGTCCTAGTACAATGCCTGGGCCACTCGGACTCGTCCGGCCTCGCTCTCGTCCCCTaGGCCCATCGCGGCGCCCCC +
Preference number: 5 (lower is better)
Translates to: EKATSVLVQCLGHSDSSGLALVP*AHRGAP
Trigger: GGGGGCGCCGCGATGGGCCAAGGGGACGAGAGCGAG...GCCGGACGAGTCCGAGTGGCCCAGGCATTGTACTAGGACGGACGTAGCTTTTTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000640909.2
CDS-3UTR CAA 90 bp CAAGAGCAGCCTGGGGGAGTCAAGGCTCCTCCTGCATTCCTGGGTACCCCTGCCCGCGTGCCGCCCACGTaGATCACGATGCGCTCGCTC +
Preference number: 5 (lower is better)
Translates to: QEQPGGVKAPPAFLGTPARVPPT*ITMRSL
Trigger: GAGCGAGCGCATCGTGATCAACGTGGGCGGCACGCG...GGCAGGGGTACCCAGGAATGCAGGAGGAGCCTTGACTCCCCCAGGCTGCTCTTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675775.1
CDS GCA 90 bp CCGCCCTGCCCACCCATCTGCAGGAGCGCGAGGCGGCCCGGACGATaGACGGTGCTCCAGCTTCCTCTACATACCCTTTCTCATTCCTCC +
Preference number: 5 (lower is better)
Translates to: PPCPPICRSARRPGR*TVLQLPLHTLSHSS
Trigger: GGAGGAATGAGAAAGGGTATGTAGAGGAAGCTGGAGCACCGTGCATCGTCCGGGCCGCCTCGCGCTCCTGCAGATGGGTGGGCAGGGCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638825.1
ENST00000675775.1
CDS-3UTR CAA 90 bp ACTCGTCCGGCAAACCTGCATGGCGTGAATTTACTCTGTCCGAGGGTGAGGAGGGGGCTGCGCTCGGACTaGGGCTCCCGCGGCGGTGCT +
Preference number: 5 (lower is better)
Translates to: TRPANLHGVNLLCPRVRRGLRSD*GSRGGA
Trigger: AGCACCGCCGCGGGAGCCCAAGTCCGAGCGCAGCCC...CCTCCTCACCCTCGGACAGAGTAAATTCACGCCATGCAGGTTTGCCGGACGAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000640909.2
CDS-3UTR CAA 90 bp GTCCTCAGCAACCTGGCGGGCCGCGTTGTCTCTTCAGAACATCACGAGACCAACGCCTCTCCGGGCGCTTaGTCGGGTGCCGGTCCAGGG +
Preference number: 5 (lower is better)
Translates to: VLSNLAGRVVSSEHHETNASPGA*SGAGPG
Trigger: CCCTGGACCGGCACCCGACAAAGCGCCCGGAGAGGC...GTTGGTCTCGTGATGTTCTGAAGAGACAACGCGGCCCGCCAGGTTGCTGAGGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CAA 90 bp AGCCCGAAATCAGGGCAGGAATTCTACTCAGCTATGGAGACAGGCTCTGCCGGGCTCGCTCTCGTCCCCTaGGCCCATCGCGGCGCCCCC +
Preference number: 5 (lower is better)
Translates to: SPKSGQEFYSAMETGSAGLALVP*AHRGAP
Trigger: GGGGGCGCCGCGATGGGCCAAGGGGACGAGAGCGAG...CCCGGCAGAGCCTGTCTCCATAGCTGAGTAGAATTCCTGCCCTGATTTCGGGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CAA 90 bp GACCCCTGGCCATGTTCCTCTCAGGCACCTACAGAAATCCCAGGAAGGGAAGGGGCGTCGTCGGCGCTGTaGTCCAGAGGAGCGCCGCCG +
Preference number: 5 (lower is better)
Translates to: DPWPCSSQAPTEIPGREGASSAL*SRGAPP
Trigger: CGGCGGCGCTCCTCTGGACAACAGCGCCGACGACGC...CCCTTCCCTTCCTGGGATTTCTGTAGGTGCCTGAGAGGAACATGGCCAGGGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS TCA 90 bp ACAGGCCAGAAGCGGGGTATTGGCAGAGGGCAGCTTGAGCGTCCCTaGGGACGGAAAAGCGGGCAGGCTGTGGAGCGAGGAGGGCACAAG +
Preference number: 5 (lower is better)
Translates to: TGQKRGIGRGQLERP*GRKSGQAVERGGHK
Trigger: CTTGTGCCCTCCTCGCTCCACAGCCTGCCCGCTTTTCCGTCCTCAGGGACGCTCAAGCTGCCCTCTGCCAATACCCCGCTTCTGGCCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526029.1
CDS-3UTR CAA 90 bp GCTACGTCCGTCCTAGTACAATGCCTGGGCCACTCGGACTCGTCCGGCAAACCTCTGGCTGGGTTTGATTaGCGGGGCCGGCGGGCACTG +
Preference number: 5 (lower is better)
Translates to: ATSVLVQCLGHSDSSGKPLAGFD*RGRRAL
Trigger: CAGTGCCCGCCGGCCCCGCAAATCAAACCCAGCCAG...AGGTTTGCCGGACGAGTCCGAGTGGCCCAGGCATTGTACTAGGACGGACGTAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000640909.2
CDS-3UTR CAA 90 bp TCTGCAAGAGCAGCCTGGGGGAGTCAAGGCTCCTCCTGCATTCCTGGGTACCCCTTCTCCTGGCTGGGTTaGATTTGCGGGGCCGGCGGG +
Preference number: 5 (lower is better)
Translates to: SARAAWGSQGSSCIPGYPFSWLG*ICGAGG
Trigger: CCCGCCGGCCCCGCAAATCAAACCCAGCCAGGAGAA...GGGGTACCCAGGAATGCAGGAGGAGCCTTGACTCCCCCAGGCTGCTCTTGCAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000675775.1
CDS-3UTR CAA 90 bp TGCCAAAAGGCTCCAGCTGCAGCCTGTCTCCATGAAGGCATAGAAGGGGACCATGGGCTGCGCTCGGACTaGGGCTCCCGCGGCGGTGCT +
Preference number: 5 (lower is better)
Translates to: CQKAPAAACLHEGIEGDHGLRSD*GSRGGA
Trigger: AGCACCGCCGCGGGAGCCCAAGTCCGAGCGCAGCCC...ATGGTCCCCTTCTATGCCTTCATGGAGACAGGCTGCAGCTGGAGCCTTTTGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000639325.2
ENST00000640318.2
CDS-3UTR CAA 90 bp GGGAGAGACTGTGGAGCTCAGGGGCAATCCCACAGGAGTGCATGGGTTTTACAGGGGGCACCCGGGGTGTaGCTCGTGCGGCTAACGCCG +
Preference number: 5 (lower is better)
Translates to: GRDCGAQGQSHRSAWVLQGAPGV*LVRLTP
Trigger: CGGCGTTAGCCGCACGAGCAACACCCCGGGTGCCCC...CTGTAAAACCCATGCACTCCTGTGGGATTGCCCCTGAGCTCCACAGTCTCTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CAA 90 bp GGCCGTAGAAAAAGCTACGTCCGTCCTAGTACAATGCCTGGGCCACTCGGACTCGCCTCTCCGGGCGCTTaGTCGGGTGCCGGTCCAGGG +
Preference number: 5 (lower is better)
Translates to: GRRKSYVRPSTMPGPLGLASPGA*SGAGPG
Trigger: CCCTGGACCGGCACCCGACAAAGCGCCCGGAGAGGC...GAGTCCGAGTGGCCCAGGCATTGTACTAGGACGGACGTAGCTTTTTCTACGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000640909.2
CDS-3UTR CAA 90 bp GCCCTCCTCAATCAGGGGAGAGGAGAGATCACTTTGCCTTTGGGACTTGACCTGCTCGCTCTCGTCCCCTaGGCCCATCGCGGCGCCCCC +
Preference number: 5 (lower is better)
Translates to: ALLNQGRGEITLPLGLDLLALVP*AHRGAP
Trigger: GGGGGCGCCGCGATGGGCCAAGGGGACGAGAGCGAG...CAGGTCAAGTCCCAAAGGCAAAGTGATCTCTCCTCTCCCCTGATTGAGGAGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675775.1
CDS-3UTR CAA 90 bp CATGGCGTGAATTTACTCTGTCCGAGGGTGAGGAGGGGCTGCAGGTCCACCCAGCGCGTGCCGCCCACGTaGATCACGATGCGCTCGCTC +
Preference number: 5 (lower is better)
Translates to: HGVNLLCPRVRRGCRSTQRVPPT*ITMRSL
Trigger: GAGCGAGCGCATCGTGATCAACGTGGGCGGCACGCG...CTGGGTGGACCTGCAGCCCCTCCTCACCCTCGGACAGAGTAAATTCACGCCATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000640909.2
CDS-3UTR CAA 90 bp ACTCGTCCGGCAAACCTGCATGGCGTGAATTTACTCTGTCCGAGGGTGAGGAGGGCACCATGCGGGGAGTaGCGCACCGTGCCCCGGCTC +
Preference number: 5 (lower is better)
Translates to: TRPANLHGVNLLCPRVRRAPCGE*RTVPRL
Trigger: GAGCCGGGGCACGGTGCGCAACTCCCCGCATGGTGC...CCTCCTCACCCTCGGACAGAGTAAATTCACGCCATGCAGGTTTGCCGGACGAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638825.1
CDS GCA 90 bp GCCCACCCATCTGCAGGAGCGCGAGGCGGCCCGGACGATGCACGGTaGTCCAGCTTCCTCTACATACCCTTTCTCATTCCTCCACCAGGT +
Preference number: 5 (lower is better)
Translates to: AHPSAGARGGPDDAR*SSFLYIPFLIPPPG
Trigger: ACCTGGTGGAGGAATGAGAAAGGGTATGTAGAGGAAGCTGGAGCACCGTGCATCGTCCGGGCCGCCTCGCGCTCCTGCAGATGGGTGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638825.1
ENST00000675775.1
CDS-3UTR CAA 90 bp GGCGTGAATTTACTCTGTCCGAGGGTGAGGAGGGGCTGCAGGTCCACCCAGATGTTCTCCTGGCTGGGTTaGATTTGCGGGGCCGGCGGG +
Preference number: 5 (lower is better)
Translates to: GVNLLCPRVRRGCRSTQMFSWLG*ICGAGG
Trigger: CCCGCCGGCCCCGCAAATCAAACCCAGCCAGGAGAA...CATCTGGGTGGACCTGCAGCCCCTCCTCACCCTCGGACAGAGTAAATTCACGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000640909.2
CDS-3UTR CAA 90 bp CCGGCAAACCTGCATGGCGTGAATTTACTCTGTCCGAGGGTGAGGAGGGGCTGCTTCTCCTGGCTGGGTTaGATTTGCGGGGCCGGCGGG +
Preference number: 5 (lower is better)
Translates to: PANLHGVNLLCPRVRRGCFSWLG*ICGAGG
Trigger: CCCGCCGGCCCCGCAAATCAAACCCAGCCAGGAGAA...GCAGCCCCTCCTCACCCTCGGACAGAGTAAATTCACGCCATGCAGGTTTGCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000640909.2
CDS-3UTR CAA 90 bp TGCCAAAAGGCTCCAGCTGCAGCCTGTCTCCATGAAGGCATAGAAGGGGACCATGCCTCTCCGGGCGCTTaGTCGGGTGCCGGTCCAGGG +
Preference number: 5 (lower is better)
Translates to: CQKAPAAACLHEGIEGDHASPGA*SGAGPG
Trigger: CCCTGGACCGGCACCCGACAAAGCGCCCGGAGAGGC...ATGGTCCCCTTCTATGCCTTCATGGAGACAGGCTGCAGCTGGAGCCTTTTGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000639325.2
ENST00000640318.2
CDS-3UTR CAA 90 bp GCAAACCTGCATGGCGTGAATTTACTCTGTCCGAGGGTGAGGAGGGGCTGCAGGCGCGTGCCGCCCACGTaGATCACGATGCGCTCGCTC +
Preference number: 5 (lower is better)
Translates to: ANLHGVNLLCPRVRRGCRRVPPT*ITMRSL
Trigger: GAGCGAGCGCATCGTGATCAACGTGGGCGGCACGCG...CCTGCAGCCCCTCCTCACCCTCGGACAGAGTAAATTCACGCCATGCAGGTTTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000640909.2
CDS-3UTR CAA 90 bp CCCAGGGGCACCAGTGAGGTTCCTCTAGCAGGCTCTTGCCTGCTGAATTTGGCCCTGGCGCTGGGGTCATaGGGCTGTGCCCCTATCCTC +
Preference number: 5 (lower is better)
Translates to: PRGTSEVPLAGSCLLNLALALGS*GCAPIL
Trigger: GAGGATAGGGGCACAGCCCAATGACCCCAGCGCCAG...GGCCAAATTCAGCAGGCAAGAGCCTGCTAGAGGAACCTCACTGGTGCCCCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CAA 90 bp TCTGCAAGAGCAGCCTGGGGGAGTCAAGGCTCCTCCTGCATTCCTGGGTACCCCCTGCTGTCAGGGGTCTaGGGGAGACATCCGCTGGGT +
Preference number: 5 (lower is better)
Translates to: SARAAWGSQGSSCIPGYPLLSGV*GRHPLG
Trigger: ACCCAGCGGATGTCTCCCCAAGACCCCTGACAGCAG...GGGGTACCCAGGAATGCAGGAGGAGCCTTGACTCCCCCAGGCTGCTCTTGCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000638825.1
CDS-3UTR CAA 90 bp CGCAACTCCTCTTGGTGGCGGATAGCCGGGGTCTCACACGCCAGCTTTTGGAGGAGACCGCAACTCCTCTaGGTGGCGGATAGCCGGGGT +
Preference number: 5 (lower is better)
Translates to: RNSSWWRIAGVSHASFWRRPQLL*VADSRG
Trigger: ACCCCGGCTATCCGCCACCAAGAGGAGTTGCGGTCT...CCTCCAAAAGCTGGCGTGTGAGACCCCGGCTATCCGCCACCAAGAGGAGTTGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CAA 90 bp ACCCATCTGCAGGAGCGCGAGGCGGCCCGGACGATGCACGGTGCTCCAGCTTCCCTTCTGCTCTGCACATaGACTCACACACCTGCATGC +
Preference number: 5 (lower is better)
Translates to: THLQEREAARTMHGAPASLLLCT*THTPAC
Trigger: GCATGCAGGTGTGTGAGTCAATGTGCAGAGCAGAAG...GGAAGCTGGAGCACCGTGCATCGTCCGGGCCGCCTCGCGCTCCTGCAGATGGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638825.1
CDS-3UTR CAA 90 bp ACTCGGACTCGTCCGGCAAACCTGCATGGCGTGAATTTACTCTGTCCGAGGGTGCTGGCTGGGTTTGATTaGCGGGGCCGGCGGGCACTG +
Preference number: 5 (lower is better)
Translates to: TRTRPANLHGVNLLCPRVLAGFD*RGRRAL
Trigger: CAGTGCCCGCCGGCCCCGCAAATCAAACCCAGCCAG...CACCCTCGGACAGAGTAAATTCACGCCATGCAGGTTTGCCGGACGAGTCCGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000640909.2
CDS-3UTR CAA 90 bp AGCCCGAAATCAGGGCAGGAATTCTACTCAGCTATGGAGACAGGCTCTGCCGGGCGCGTGCCGCCCACGTaGATCACGATGCGCTCGCTC +
Preference number: 5 (lower is better)
Translates to: SPKSGQEFYSAMETGSAGRVPPT*ITMRSL
Trigger: GAGCGAGCGCATCGTGATCAACGTGGGCGGCACGCG...CCCGGCAGAGCCTGTCTCCATAGCTGAGTAGAATTCCTGCCCTGATTTCGGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CAA 90 bp CGGACTCGTCCGGCAAACCTGCATGGCGTGAATTTACTCTGTCCGAGGGTGAGGCTGAGCGCCAGGCGCTaGGTCATCTCCAGCTCGTCC +
Preference number: 5 (lower is better)
Translates to: RTRPANLHGVNLLCPRVRLSARR*VISSSS
Trigger: GGACGAGCTGGAGATGACCAAGCGCCTGGCGCTCAG...CCTCACCCTCGGACAGAGTAAATTCACGCCATGCAGGTTTGCCGGACGAGTCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000640909.2
CDS-3UTR CAA 90 bp TGGGAGAGGGGAGGGAAACAGTATGGAGAGGACGCGGATGACGATGTGGGGGTTCTGAGCGCCAGGCGCTaGGTCATCTCCAGCTCGTCC +
Preference number: 5 (lower is better)
Translates to: WERGGKQYGEDADDDVGVLSARR*VISSSS
Trigger: GGACGAGCTGGAGATGACCAAGCGCCTGGCGCTCAG...AACCCCCACATCGTCATCCGCGTCCTCTCCATACTGTTTCCCTCCCCTCTCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CAA 90 bp CAAGAGCAGCCTGGGGGAGTCAAGGCTCCTCCTGCATTCCTGGGTACCCCTGCCTTGTTCACGATGGGGTaGAAGCGCTCGTGGGTCTCC +
Preference number: 5 (lower is better)
Translates to: QEQPGGVKAPPAFLGTPALFTMG*KRSWVS
Trigger: GGAGACCCACGAGCGCTTCAACCCCATCGTGAACAA...GGCAGGGGTACCCAGGAATGCAGGAGGAGCCTTGACTCCCCCAGGCTGCTCTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000675775.1
CDS-3UTR CAA 90 bp GCCCAGGCGGGGGCTTCTCTGAGACCTCACTGCTGTTCTAGGTGCCATGGGCAGCCGGTAGTAGCGCACTaGCGTGCCATTGCGAACGTT +
Preference number: 5 (lower is better)
Translates to: AQAGASLRPHCCSRCHGQPVVAH*RAIANV
Trigger: AACGTTCGCAATGGCACGCAAGTGCGCTACTACCGG...CTGCCCATGGCACCTAGAACAGCAGTGAGGTCTCAGAGAAGCCCCCGCCTGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CAA 90 bp GCGGGTGCCCGAGCGCGTAAAGGGCAGGCCCTCATCGGGAGTGAGGGCCTGGTCACGGTCAGTTACCATTaGGCCGTAGAAAAAGCTACG +
Preference number: 5 (lower is better)
Translates to: AGARARKGQALIGSEGLVTVSYH*AVEKAT
Trigger: CGTAGCTTTTTCTACGGCCAAATGGTAACTGACCGT...GACCAGGCCCTCACTCCCGATGAGGGCCTGCCCTTTACGCGCTCGGGCACCCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638366.1
CDS-3UTR CAA 90 bp GTCCTAGTACAATGCCTGGGCCACTCGGACTCGTCCGGCAAACCTGCATGGCGTCTGCTGTCAGGGGTCTaGGGGAGACATCCGCTGGGT +
Preference number: 5 (lower is better)
Translates to: VLVQCLGHSDSSGKPAWRLLSGV*GRHPLG
Trigger: ACCCAGCGGATGTCTCCCCAAGACCCCTGACAGCAG...ACGCCATGCAGGTTTGCCGGACGAGTCCGAGTGGCCCAGGCATTGTACTAGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000638825.1
CDS-3UTR CAA 90 bp CGCAACTCCTCTTGGTGGCGGATAGCCGGGGTCTCACACGCCAGCTTTTGGAGGGCCCCCTCTAGTCTTTaGCTCGGCAGCCGCTTCCAT +
Preference number: 5 (lower is better)
Translates to: RNSSWWRIAGVSHASFWRAPSSL*LGSRFH
Trigger: ATGGAAGCGGCTGCCGAGCAAAAGACTAGAGGGGGC...CCTCCAAAAGCTGGCGTGTGAGACCCCGGCTATCCGCCACCAAGAGGAGTTGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CAA 90 bp GCCCAGGCGGGGGCTTCTCTGAGACCTCACTGCTGTTCTAGGTGCCATGGGCAGCCCCTGCCCCATCCTTaGGATGAGATAGTGGCTAGG +
Preference number: 5 (lower is better)
Translates to: AQAGASLRPHCCSRCHGQPLPHP*DEIVAR
Trigger: CCTAGCCACTATCTCATCCAAAGGATGGGGCAGGGG...CTGCCCATGGCACCTAGAACAGCAGTGAGGTCTCAGAGAAGCCCCCGCCTGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CAA 90 bp GCCCAAAGTTCGGGATGGTTTTGGGCAGGGGACAAGGAACATCCATCAGGGATCCTGGCTGGGTTTGATTaGCGGGGCCGGCGGGCACTG +
Preference number: 5 (lower is better)
Translates to: AQSSGWFWAGDKEHPSGILAGFD*RGRRAL
Trigger: CAGTGCCCGCCGGCCCCGCAAATCAAACCCAGCCAG...GATCCCTGATGGATGTTCCTTGTCCCCTGCCCAAAACCATCCCGAACTTTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CAA 90 bp TGCCAAAAGGCTCCAGCTGCAGCCTGTCTCCATGAAGGCATAGAAGGGGACCATCTGGCTGGGTTTGATTaGCGGGGCCGGCGGGCACTG +
Preference number: 5 (lower is better)
Translates to: CQKAPAAACLHEGIEGDHLAGFD*RGRRAL
Trigger: CAGTGCCCGCCGGCCCCGCAAATCAAACCCAGCCAG...ATGGTCCCCTTCTATGCCTTCATGGAGACAGGCTGCAGCTGGAGCCTTTTGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000639325.2
ENST00000640318.2
CDS-3UTR CAA 90 bp AGATGGCAAAGCATTTCACGTACAGTGCGTTTCTCGACAAATCCCAGGGGCTTCGGGCTGCGCTCGGACTaGGGCTCCCGCGGCGGTGCT +
Preference number: 5 (lower is better)
Translates to: RWQSISRTVRFSTNPRGFGLRSD*GSRGGA
Trigger: AGCACCGCCGCGGGAGCCCAAGTCCGAGCGCAGCCC...GAAGCCCCTGGGATTTGTCGAGAAACGCACTGTACGTGAAATGCTTTGCCATCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CAA 90 bp GAGTCCTCAATAGGAACTCCATACGTGGATACATGGGAAGGCTCTGTCTCCCTGGGGGCACCCGGGGTGTaGCTCGTGCGGCTAACGCCG +
Preference number: 5 (lower is better)
Translates to: ESSIGTPYVDTWEGSVSLGAPGV*LVRLTP
Trigger: CGGCGTTAGCCGCACGAGCAACACCCCGGGTGCCCC...CAGGGAGACAGAGCCTTCCCATGTATCCACGTATGGAGTTCCTATTGAGGACTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000640909.2
CDS-3UTR CAA 90 bp ACTCGGACTCGTCCGGCAAACCTGCATGGCGTGAATTTACTCTGTCCGAGGGTGCTGAGCGCCAGGCGCTaGGTCATCTCCAGCTCGTCC +
Preference number: 5 (lower is better)
Translates to: TRTRPANLHGVNLLCPRVLSARR*VISSSS
Trigger: GGACGAGCTGGAGATGACCAAGCGCCTGGCGCTCAG...CACCCTCGGACAGAGTAAATTCACGCCATGCAGGTTTGCCGGACGAGTCCGAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000640909.2
CDS-3UTR CAA 90 bp GTGAATTTACTCTGTCCGAGGGTGAGGAGGGGCTGCAGGTCCACCCAGATGCTTCTGGCGCTGGGGTCATaGGGCTGTGCCCCTATCCTC +
Preference number: 5 (lower is better)
Translates to: VNLLCPRVRRGCRSTQMLLALGS*GCAPIL
Trigger: GAGGATAGGGGCACAGCCCAATGACCCCAGCGCCAG...AAGCATCTGGGTGGACCTGCAGCCCCTCCTCACCCTCGGACAGAGTAAATTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000640909.2
CDS-3UTR CAA 90 bp ATAGCCACCAGTGTCCTCGGCCAAGCCGCCTGGTCAAGTCACTCTCACAGCCTCCTGGGTACCCCTGCCTaGGGGTCATGGCCTAAAGTC +
Preference number: 5 (lower is better)
Translates to: IATSVLGQAAWSSHSHSLLGTPA*GSWPKV
Trigger: GACTTTAGGCCATGACCCCAAGGCAGGGGTACCCAG...GAGGCTGTGAGAGTGACTTGACCAGGCGGCTTGGCCGAGGACACTGGTGGCTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638825.1
CDS-3UTR CAA 90 bp GTGGGGATGTGGTTTTCAGTATCTTGCATTACAGGACCACATCTGTGCCCACACGCGTCGTCGGCGCTGTaGTCCAGAGGAGCGCCGCCG +
Preference number: 5 (lower is better)
Translates to: VGMWFSVSCITGPHLCPHASSAL*SRGAPP
Trigger: CGGCGGCGCTCCTCTGGACAACAGCGCCGACGACGC...GTGTGGGCACAGATGTGGTCCTGTAATGCAAGATACTGAAAACCACATCCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000639325.2
ENST00000640318.2
CDS-3UTR CAA 90 bp CATGGCGTGAATTTACTCTGTCCGAGGGTGAGGAGGGGCTGCAGGTCCACCCAGTTGTTCACGATGGGGTaGAAGCGCTCGTGGGTCTCC +
Preference number: 5 (lower is better)
Translates to: HGVNLLCPRVRRGCRSTQLFTMG*KRSWVS
Trigger: GGAGACCCACGAGCGCTTCAACCCCATCGTGAACAA...CTGGGTGGACCTGCAGCCCCTCCTCACCCTCGGACAGAGTAAATTCACGCCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000640909.2
CDS-3UTR CAA 90 bp GTCCTAGTACAATGCCTGGGCCACTCGGACTCGTCCGGCAAACCTGCATGGCGTCGCACTTGCGTGCCATaGCGAACGTTCTCGATCTCC +
Preference number: 5 (lower is better)
Translates to: VLVQCLGHSDSSGKPAWRRTCVP*RTFSIS
Trigger: GGAGATCGAGAACGTTCGCAATGGCACGCAAGTGCG...ACGCCATGCAGGTTTGCCGGACGAGTCCGAGTGGCCCAGGCATTGTACTAGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000640909.2
CDS-3UTR CAA 90 bp CCATCTGCAAGAGCAGCCTGGGGGAGTCAAGGCTCCTCCTGCATTCCTGGGTACCCGGTAGTAGCGCACTaGCGTGCCATTGCGAACGTT +
Preference number: 5 (lower is better)
Translates to: PSARAAWGSQGSSCIPGYPVVAH*RAIANV
Trigger: AACGTTCGCAATGGCACGCAAGTGCGCTACTACCGG...GTACCCAGGAATGCAGGAGGAGCCTTGACTCCCCCAGGCTGCTCTTGCAGATGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675775.1
CDS-3UTR CAA 90 bp GCCCTCCTCAATCAGGGGAGAGGAGAGATCACTTTGCCTTTGGGACTTGACCTGCTGGCGCTGGGGTCATaGGGCTGTGCCCCTATCCTC +
Preference number: 5 (lower is better)
Translates to: ALLNQGRGEITLPLGLDLLALGS*GCAPIL
Trigger: GAGGATAGGGGCACAGCCCAATGACCCCAGCGCCAG...CAGGTCAAGTCCCAAAGGCAAAGTGATCTCTCCTCTCCCCTGATTGAGGAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000675775.1
CDS-3UTR CAA 90 bp CCAGGTGGGCACGCGTACTCCCCGGTTGATAAGAGGAAGCAGGGTCCGTATCTCACGCGTACTCCCCGGTaGATAAGAGGAAGCAGGGTC +
Preference number: 5 (lower is better)
Translates to: PGGHAYSPVDKRKQGPYLTRTPR*IRGSRV
Trigger: GACCCTGCTTCCTCTTATCAACCGGGGAGTACGCGT...GAGATACGGACCCTGCTTCCTCTTATCAACCGGGGAGTACGCGTGCCCACCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638366.1
CDS-3UTR CAA 90 bp CATGGCGTGAATTTACTCTGTCCGAGGGTGAGGAGGGGCTGCAGGTCCACCCAGACGCGTACTCCCCGGTaGATAAGAGGAAGCAGGGTC +
Preference number: 5 (lower is better)
Translates to: HGVNLLCPRVRRGCRSTQTRTPR*IRGSRV
Trigger: GACCCTGCTTCCTCTTATCAACCGGGGAGTACGCGT...CTGGGTGGACCTGCAGCCCCTCCTCACCCTCGGACAGAGTAAATTCACGCCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265969.8
ENST00000638366.1
ENST00000638825.1
ENST00000640909.2
CDS-3UTR CAA 90 bp GGCGTGAATTTACTCTGTCCGAGGGTGAGGAGGGGCTGCAGGTCCACCCAGATGACGCGTACTCCCCGGTaGATAAGAGGAAGCAGGGTC +
Preference number: 5 (lower is better)
Translates to: GVNLLCPRVRRGCRSTQMTRTPR*IRGSRV
Trigger: GACCCTGCTTCCTCTTATCAACCGGGGAGTACGCGT...CATCTGGGTGGACCTGCAGCCCCTCCTCACCCTCGGACAGAGTAAATTCACGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265969.8
ENST00000638366.1
ENST00000638825.1
ENST00000640909.2
CDS-3UTR CAA 90 bp ACCCATCTGCAGGAGCGCGAGGCGGCCCGGACGATGCACGGTGCTCCAGCTTCCTCTCCTCCCTCTGGCTaGTGGATTGATTATCTTTCA +
Preference number: 5 (lower is better)
Translates to: THLQEREAARTMHGAPASSPPSG*WIDYLS
Trigger: TGAAAGATAATCAATCCACAAGCCAGAGGGAGGAGA...GGAAGCTGGAGCACCGTGCATCGTCCGGGCCGCCTCGCGCTCCTGCAGATGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638825.1
ENST00000675775.1
CDS-3UTR CAA 90 bp CCACCAGTGTCCTCGGCCAAGCCGCCTGGTCAAGTCACTCTCACAGCCTCTGTCTCTTCTCCAGCTGGCTaGGTTTGCCCATGCACTGAG +
Preference number: 5 (lower is better)
Translates to: PPVSSAKPPGQVTLTASVSSPAG*VCPCTE
Trigger: CTCAGTGCATGGGCAAACCAAGCCAGCTGGAGAAGA...GACAGAGGCTGTGAGAGTGACTTGACCAGGCGGCTTGGCCGAGGACACTGGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638825.1
CDS GCA 90 bp GCGAAGGCCACATACTGTCAGACTTTATCTCCCTTCTACACGCCATaGCTGCAGCAGCTGAGTCCCACCACACCCAGGATCCAGGCCTGC +
Preference number: 5 (lower is better)
Translates to: AKATYCQTLSPFYTP*LQQLSPTTPRIQAC
Trigger: GCAGGCCTGGATCCTGGGTGTGGTGGGACTCAGCTGCTGCAGGCATGGCGTGTAGAAGGGAGATAAAGTCTGACAGTATGTGGCCTTCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640153.1
CDS-3UTR CAA 90 bp CGAGATGCAGAAGTGTGTCTCTGCAAACCTCCGACTGCTTCAGGAAAACAAATCGGGGCACCCGGGGTGTaGCTCGTGCGGCTAACGCCG +
Preference number: 5 (lower is better)
Translates to: RDAEVCLCKPPTASGKQIGAPGV*LVRLTP
Trigger: CGGCGTTAGCCGCACGAGCAACACCCCGGGTGCCCC...GATTTGTTTTCCTGAAGCAGTCGGAGGTTTGCAGAGACACACTTCTGCATCTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000265969.8
CDS-3UTR CAA 90 bp CCATCTGCAAGAGCAGCCTGGGGGAGTCAAGGCTCCTCCTGCATTCCTGGGTACATCGGCACAAAGCTTTaGGGGGAAAGGTCAGCCGCT +
Preference number: 5 (lower is better)
Translates to: PSARAAWGSQGSSCIPGYIGTKL*GERSAA
Trigger: AGCGGCTGACCTTTCCCCCAAAAGCTTTGTGCCGAT...GTACCCAGGAATGCAGGAGGAGCCTTGACTCCCCCAGGCTGCTCTTGCAGATGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000675775.1
CDS-3UTR CAA 90 bp AGCCGTGCGAGTTTCCACAATTCTATTTGGAGCAAAGTTCTCAGTTTCCACGTGCTCGCTCTCGTCCCCTaGGCCCATCGCGGCGCCCCC +
Preference number: 5 (lower is better)
Translates to: SRASFHNSIWSKVLSFHVLALVP*AHRGAP
Trigger: GGGGGCGCCGCGATGGGCCAAGGGGACGAGAGCGAG...CACGTGGAAACTGAGAACTTTGCTCCAAATAGAATTGTGGAAACTCGCACGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265969.8
CDS-3UTR CAA 90 bp TCAATAGGAACTCCATACGTGGATACATGGGAAGGCTCTGTCTCCCTGAGGAAAGCGTCGTCGGCGCTGTaGTCCAGAGGAGCGCCGCCG +
Preference number: 5 (lower is better)
Translates to: SIGTPYVDTWEGSVSLRKASSAL*SRGAPP
Trigger: CGGCGGCGCTCCTCTGGACAACAGCGCCGACGACGC...TTTCCTCAGGGAGACAGAGCCTTCCCATGTATCCACGTATGGAGTTCCTATTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640909.2
CDS-3UTR CAA 90 bp GCCACTCGGACTCGTCCGGCAAACCTGCATGGCGTGAATTTACTCTGTCCGAGGCCGGTAGTAGCGCACTaGCGTGCCATTGCGAACGTT +
Preference number: 5 (lower is better)
Translates to: ATRTRPANLHGVNLLCPRPVVAH*RAIANV
Trigger: AACGTTCGCAATGGCACGCAAGTGCGCTACTACCGG...CCTCGGACAGAGTAAATTCACGCCATGCAGGTTTGCCGGACGAGTCCGAGTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000640909.2
CDS-3UTR CAA 90 bp GCCCAGGCGGGGGCTTCTCTGAGACCTCACTGCTGTTCTAGGTGCCATGGGCAGAGATGGTTTCCAGGCTaGAAATGGGCTGAGATGAGC +
Preference number: 5 (lower is better)
Translates to: AQAGASLRPHCCSRCHGQRWFPG*KWAEMS
Trigger: GCTCATCTCAGCCCATTTCAAGCCTGGAAACCATCT...CTGCCCATGGCACCTAGAACAGCAGTGAGGTCTCAGAGAAGCCCCCGCCTGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CAA 90 bp ACTAAGAAAGCAGATCTCCCACCACTCAGCCCAGGCCCCTTTGCTTCAAATCGTTTCTCCTGGCTGGGTTaGATTTGCGGGGCCGGCGGG +
Preference number: 5 (lower is better)
Translates to: TKKADLPPLSPGPFASNRFSWLG*ICGAGG
Trigger: CCCGCCGGCCCCGCAAATCAAACCCAGCCAGGAGAA...ACGATTTGAAGCAAAGGGGCCTGGGCTGAGTGGTGGGAGATCTGCTTTCTTAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000639325.2
ENST00000640318.2
CDS-3UTR CAA 90 bp ATTTTGAGTAGCGTGATGAAATCTCATGCCATGTCACTCCATCCCACCCAGAACGGGGCACCCGGGGTGTaGCTCGTGCGGCTAACGCCG +
Preference number: 5 (lower is better)
Translates to: ILSSVMKSHAMSLHPTQNGAPGV*LVRLTP
Trigger: CGGCGTTAGCCGCACGAGCAACACCCCGGGTGCCCC...GTTCTGGGTGGGATGGAGTGACATGGCATGAGATTTCATCACGCTACTCAAAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000639325.2
ENST00000640318.2
CDS-3UTR CAA 90 bp GCCACTCGGACTCGTCCGGCAAACCTGCATGGCGTGAATTTACTCTGTCCGAGGATCGGCACAAAGCTTTaGGGGGAAAGGTCAGCCGCT +
Preference number: 5 (lower is better)
Translates to: ATRTRPANLHGVNLLCPRIGTKL*GERSAA
Trigger: AGCGGCTGACCTTTCCCCCAAAAGCTTTGTGCCGAT...CCTCGGACAGAGTAAATTCACGCCATGCAGGTTTGCCGGACGAGTCCGAGTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000640909.2
CDS-3UTR CAA 90 bp AGCCGTGCGAGTTTCCACAATTCTATTTGGAGCAAAGTTCTCAGTTTCCACGTGGCGTCGTCGGCGCTGTaGTCCAGAGGAGCGCCGCCG +
Preference number: 5 (lower is better)
Translates to: SRASFHNSIWSKVLSFHVASSAL*SRGAPP
Trigger: CGGCGGCGCTCCTCTGGACAACAGCGCCGACGACGC...CACGTGGAAACTGAGAACTTTGCTCCAAATAGAATTGTGGAAACTCGCACGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265969.8
CDS-3UTR CAA 90 bp GGACTTGACCTGCCATCTGCAAGAGCAGCCTGGGGGAGTCAAGGCTCCTCCTGCTTCTCGATCTCCGTCTaGTTCACGATGGGGTTGAAG +
Preference number: 5 (lower is better)
Translates to: GLDLPSARAAWGSQGSSCFSISV*FTMGLK
Trigger: CTTCAACCCCATCGTGAACAAGACGGAGATCGAGAA...GCAGGAGGAGCCTTGACTCCCCCAGGCTGCTCTTGCAGATGGCAGGTCAAGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675775.1
CDS-3UTR CAA 90 bp CAATGCCTGGGCCACTCGGACTCGTCCGGCAAACCTGCATGGCGTGAATTTACTCCGGTAGTAGCGCACTaGCGTGCCATTGCGAACGTT +
Preference number: 5 (lower is better)
Translates to: QCLGHSDSSGKPAWREFTPVVAH*RAIANV
Trigger: AACGTTCGCAATGGCACGCAAGTGCGCTACTACCGG...AGTAAATTCACGCCATGCAGGTTTGCCGGACGAGTCCGAGTGGCCCAGGCATTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000640909.2
CDS-3UTR CAA 90 bp GGCCGTAGAAAAAGCTACGTCCGTCCTAGTACAATGCCTGGGCCACTCGGACTCACGCGTACTCCCCGGTaGATAAGAGGAAGCAGGGTC +
Preference number: 5 (lower is better)
Translates to: GRRKSYVRPSTMPGPLGLTRTPR*IRGSRV
Trigger: GACCCTGCTTCCTCTTATCAACCGGGGAGTACGCGT...GAGTCCGAGTGGCCCAGGCATTGTACTAGGACGGACGTAGCTTTTTCTACGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265969.8
ENST00000638366.1
ENST00000638825.1
ENST00000640909.2
CDS-3UTR CAA 90 bp GCTACGTCCGTCCTAGTACAATGCCTGGGCCACTCGGACTCGTCCGGCAAACCTGAACGCCGTTACAGTTaGGCTCCAACAACGTGTGTG +
Preference number: 5 (lower is better)
Translates to: ATSVLVQCLGHSDSSGKPERRYS*APTTCV
Trigger: CACACACGTTGTTGGAGCCAAACTGTAACGGCGTTC...AGGTTTGCCGGACGAGTCCGAGTGGCCCAGGCATTGTACTAGGACGGACGTAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000638825.1
CDS-3UTR CAA 90 bp GGGAGAGACTGTGGAGCTCAGGGGCAATCCCACAGGAGTGCATGGGTTTTACAGTCCTCTAGCAGGCTCTaGCCTGCTGAATTTGGCCGC +
Preference number: 5 (lower is better)
Translates to: GRDCGAQGQSHRSAWVLQSSSRL*PAEFGR
Trigger: GCGGCCAAATTCAGCAGGCAAGAGCCTGCTAGAGGA...CTGTAAAACCCATGCACTCCTGTGGGATTGCCCCTGAGCTCCACAGTCTCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CAA 90 bp GTGAGGGCCCCAAATACTTCCTCAGCCACAGAGACTGTCCAAGCCAGAACTGTCACCTGGCGGGCCGCGTaGTCTCTTCAGAACATCACG +
Preference number: 5 (lower is better)
Translates to: VRAPNTSSATETVQARTVTWRAA*SLQNIT
Trigger: CGTGATGTTCTGAAGAGACAACGCGGCCCGCCAGGT...GACAGTTCTGGCTTGGACAGTCTCTGTGGCTGAGGAAGTATTTGGGGCCCTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CAA 90 bp TGGGAGAGGGGAGGGAAACAGTATGGAGAGGACGCGGATGACGATGTGGGGGTTAGGCCCAGAGCCCTGTaGGTAGCTCCTGAAATCAAG +
Preference number: 5 (lower is better)
Translates to: WERGGKQYGEDADDDVGVRPRAL*VAPEIK
Trigger: CTTGATTTCAGGAGCTACCAACAGGGCTCTGGGCCT...AACCCCCACATCGTCATCCGCGTCCTCTCCATACTGTTTCCCTCCCCTCTCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CAA 90 bp GCCCTCCTCAATCAGGGGAGAGGAGAGATCACTTTGCCTTTGGGACTTGACCTGCTGGGTACCCCTGCCTaGGGGTCATGGCCTAAAGTC +
Preference number: 5 (lower is better)
Translates to: ALLNQGRGEITLPLGLDLLGTPA*GSWPKV
Trigger: GACTTTAGGCCATGACCCCAAGGCAGGGGTACCCAG...CAGGTCAAGTCCCAAAGGCAAAGTGATCTCTCCTCTCCCCTGATTGAGGAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000638825.1
ENST00000675775.1
CDS-3UTR CAA 90 bp AGTGTCCTCGGCCAAGCCGCCTGGTCAAGTCACTCTCACAGCCTCTGTCGGCATCTTTGCCTTTGGGACTaGACCTGCCATCTGCAAGAG +
Preference number: 5 (lower is better)
Translates to: SVLGQAAWSSHSHSLCRHLCLWD*TCHLQE
Trigger: CTCTTGCAGATGGCAGGTCAAGTCCCAAAGGCAAAG...ATGCCGACAGAGGCTGTGAGAGTGACTTGACCAGGCGGCTTGGCCGAGGACACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638825.1
CDS-3UTR CAA 90 bp GCTACGTCCGTCCTAGTACAATGCCTGGGCCACTCGGACTCGTCCGGCAAACCTTGTCTTGTCTGCTCTTaGGGGCCACACCAATCAGTC +
Preference number: 5 (lower is better)
Translates to: ATSVLVQCLGHSDSSGKPCLVCS*GPHQSV
Trigger: GACTGATTGGTGTGGCCCCAAAGAGCAGACAAGACA...AGGTTTGCCGGACGAGTCCGAGTGGCCCAGGCATTGTACTAGGACGGACGTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638825.1
CDS-3UTR CAA 90 bp AATATTCAAGTCTTAGAAGGGGCAGTGATATGTTTCAGTTGTGAGCCAGCCAGAGGGCTGCGCTCGGACTaGGGCTCCCGCGGCGGTGCT +
Preference number: 5 (lower is better)
Translates to: NIQVLEGAVICFSCEPARGLRSD*GSRGGA
Trigger: AGCACCGCCGCGGGAGCCCAAGTCCGAGCGCAGCCC...TCTGGCTGGCTCACAACTGAAACATATCACTGCCCCTTCTAAGACTTGAATATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000639325.2
ENST00000640318.2
CDS-3UTR CAA 90 bp GAGAACAGTAGTTCCCCTTATCTGCAGTTGCACTTTCTACAGTTTCTGTTACCTCTCGCTCTCGTCCCCTaGGCCCATCGCGGCGCCCCC +
Preference number: 5 (lower is better)
Translates to: ENSSSPYLQLHFLQFLLPLALVP*AHRGAP
Trigger: GGGGGCGCCGCGATGGGCCAAGGGGACGAGAGCGAG...AGGTAACAGAAACTGTAGAAAGTGCAACTGCAGATAAGGGGAACTACTGTTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000639325.2
ENST00000640318.2
CDS-3UTR CAA 90 bp CCGGCAAACCTGCATGGCGTGAATTTACTCTGTCCGAGGGTGAGGAGGGGCTGCATGAACTCTACCTTGTaGGGGCAGAAGATGACACGC +
Preference number: 5 (lower is better)
Translates to: PANLHGVNLLCPRVRRGCMNSTL*GQKMTR
Trigger: GCGTGTCATCTTCTGCCCCAACAAGGTAGAGTTCAT...GCAGCCCCTCCTCACCCTCGGACAGAGTAAATTCACGCCATGCAGGTTTGCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000640909.2
CDS-3UTR CAA 90 bp CCTGGCGGGCCGCGTTGTCTCTTCAGAACATCACGAGACCAACCGCGTCAACCTATGAACTCTACCTTGTaGGGGCAGAAGATGACACGC +
Preference number: 5 (lower is better)
Translates to: PGGPRCLFRTSRDQPRQPMNSTL*GQKMTR
Trigger: GCGTGTCATCTTCTGCCCCAACAAGGTAGAGTTCAT...AGGTTGACGCGGTTGGTCTCGTGATGTTCTGAAGAGACAACGCGGCCCGCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CAA 90 bp TCCGGCAAACCTGCATGGCGTGAATTTACTCTGTCCGAGGGTGAGGAGGGGCTGAGGGGGTTGGTGGGTTaGGTTTGCTGGGTTTTCTGT +
Preference number: 5 (lower is better)
Translates to: SGKPAWREFTLSEGEEGLRGLVG*VCWVFC
Trigger: ACAGAAAACCCAGCAAACCAAACCCACCAACCCCCT...CAGCCCCTCCTCACCCTCGGACAGAGTAAATTCACGCCATGCAGGTTTGCCGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000638825.1
CDS-3UTR CAA 90 bp GCTACGTCCGTCCTAGTACAATGCCTGGGCCACTCGGACTCGTCCGGCAAACCTAGGGTAATCATACAGTaGCAGGGGGTTGGTGGGTTT +
Preference number: 5 (lower is better)
Translates to: ATSVLVQCLGHSDSSGKPRVIIQ*QGVGGF
Trigger: AAACCCACCAACCCCCTGCAACTGTATGATTACCCT...AGGTTTGCCGGACGAGTCCGAGTGGCCCAGGCATTGTACTAGGACGGACGTAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000638825.1
CDS-3UTR CAA 90 bp GGGTCTTGGGGAGACATCCGCTGGGTCACAAGCATGCCAAACGGGGAAGAAGGCGACCGACTGCCCTTTTaGGAAGCTTTCCTCTTGATC +
Preference number: 5 (lower is better)
Translates to: GSWGDIRWVTSMPNGEEGDRLPF*EAFLLI
Trigger: GATCAAGAGGAAAGCTTCCAAAAAGGGCAGTCGGTC...GCCTTCTTCCCCGTTTGGCATGCTTGTGACCCAGCGGATGTCTCCCCAAGACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000638825.1
CDS-3UTR CAA 90 bp CTGCCTCTGTGGAGATGGTGCCGCCTGAGACCCTTCTCTGGCTCTGAATGCTGGTTCACGGGAAAGTGGTaGTACACTGGTTGGGATGTC +
Preference number: 5 (lower is better)
Translates to: LPLWRWCRLRPFSGSECWFTGKW*YTGWDV
Trigger: GACATCCCAACCAGTGTACAACCACTTTCCCGTGAA...CCAGCATTCAGAGCCAGAGAAGGGTCTCAGGCGGCACCATCTCCACAGAGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CAA 90 bp GCCCAAAGTTCGGGATGGTTTTGGGCAGGGGACAAGGAACATCCATCAGGGATCCAGGAGGAGACCAGATaGTCCCTGGGACAGACACAC +
Preference number: 5 (lower is better)
Translates to: AQSSGWFWAGDKEHPSGIQEETR*SLGQTH
Trigger: GTGTGTCTGTCCCAGGGACAATCTGGTCTCCTCCTG...GATCCCTGATGGATGTTCCTTGTCCCCTGCCCAAAACCATCCCGAACTTTGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CAA 90 bp AAGCAGAGAGCTCGGAGCTGTTTCAGCCTCGGAGACCCCTGGCCATGTTCCTCTTTGCTGGGCATTTCCTaGGGTTTAGCCCTGAGGGAT +
Preference number: 5 (lower is better)
Translates to: KQRARSCFSLGDPWPCSSLLGIS*GLALRD
Trigger: ATCCCTCAGGGCTAAACCCAAGGAAATGCCCAGCAA...AGAGGAACATGGCCAGGGGTCTCCGAGGCTGAAACAGCTCCGAGCTCTCTGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CAA 90 bp GTCAAGGCTCCTCCTGCATTCCTGGGTACCCCTGCCTTGGGGTCATGGCCTAAACTTTGCCTTTGGGACTaGACCTGCCATCTGCAAGAG +
Preference number: 5 (lower is better)
Translates to: VKAPPAFLGTPALGSWPKLCLWD*TCHLQE
Trigger: CTCTTGCAGATGGCAGGTCAAGTCCCAAAGGCAAAG...TTTAGGCCATGACCCCAAGGCAGGGGTACCCAGGAATGCAGGAGGAGCCTTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000638825.1
ENST00000675775.1
CDS-3UTR CAA 90 bp GGCGTGAATTTACTCTGTCCGAGGGTGAGGAGGGGCTGCAGGTCCACCCAGATGGAGATCACTTTGCCTTaGGGACTTGACCTGCCATCT +
Preference number: 5 (lower is better)
Translates to: GVNLLCPRVRRGCRSTQMEITLP*GLDLPS
Trigger: AGATGGCAGGTCAAGTCCCAAAGGCAAAGTGATCTC...CATCTGGGTGGACCTGCAGCCCCTCCTCACCCTCGGACAGAGTAAATTCACGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638825.1
CDS-3UTR CAA 90 bp CCGGCAAACCTGCATGGCGTGAATTTACTCTGTCCGAGGGTGAGGAGGGGCTGCAGGCTGCACCAACTGTaGCTTTCAAAAACCCAGCTC +
Preference number: 5 (lower is better)
Translates to: PANLHGVNLLCPRVRRGCRLHQL*LSKTQL
Trigger: GAGCTGGGTTTTTGAAAGCAACAGTTGGTGCAGCCT...GCAGCCCCTCCTCACCCTCGGACAGAGTAAATTCACGCCATGCAGGTTTGCCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638825.1
CDS-3UTR CAA 90 bp ATTTTGAGTAGCGTGATGAAATCTCATGCCATGTCACTCCATCCCACCCAGAACCTGGCTGGGTTTGATTaGCGGGGCCGGCGGGCACTG +
Preference number: 5 (lower is better)
Translates to: ILSSVMKSHAMSLHPTQNLAGFD*RGRRAL
Trigger: CAGTGCCCGCCGGCCCCGCAAATCAAACCCAGCCAG...GTTCTGGGTGGGATGGAGTGACATGGCATGAGATTTCATCACGCTACTCAAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000639325.2
ENST00000640318.2
CDS-3UTR CAA 90 bp GAGAACAGTAGTTCCCCTTATCTGCAGTTGCACTTTCTACAGTTTCTGTTACCTGGGGCACCCGGGGTGTaGCTCGTGCGGCTAACGCCG +
Preference number: 5 (lower is better)
Translates to: ENSSSPYLQLHFLQFLLPGAPGV*LVRLTP
Trigger: CGGCGTTAGCCGCACGAGCAACACCCCGGGTGCCCC...AGGTAACAGAAACTGTAGAAAGTGCAACTGCAGATAAGGGGAACTACTGTTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000639325.2
ENST00000640318.2
CDS-3UTR CAA 90 bp CACCACTCAGCCCAGGCCCCTTTGCTTCAAATCGTGTCTCAGAGGGAGAACAGTATCGGCACAAAGCTTTaGGGGGAAAGGTCAGCCGCT +
Preference number: 5 (lower is better)
Translates to: HHSAQAPLLQIVSQRENSIGTKL*GERSAA
Trigger: AGCGGCTGACCTTTCCCCCAAAAGCTTTGTGCCGAT...ACTGTTCTCCCTCTGAGACACGATTTGAAGCAAAGGGGCCTGGGCTGAGTGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000639325.2
ENST00000640318.2
CDS-3UTR CAA 90 bp GAGAGCCTGCAAAGTACAGATGACCATGGTATACTTGGGAATGTTGGGTTTATAGCGTCGTCGGCGCTGTaGTCCAGAGGAGCGCCGCCG +
Preference number: 5 (lower is better)
Translates to: ESLQSTDDHGILGNVGFIASSAL*SRGAPP
Trigger: CGGCGGCGCTCCTCTGGACAACAGCGCCGACGACGC...TATAAACCCAACATTCCCAAGTATACCATGGTCATCTGTACTTTGCAGGCTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000639325.2
ENST00000640318.2
CDS-3UTR CAA 90 bp GCAAACCTGCATGGCGTGAATTTACTCTGTCCGAGGGTGAGGAGGGGCTGCAGGTTCTCGATCTCCGTCTaGTTCACGATGGGGTTGAAG +
Preference number: 5 (lower is better)
Translates to: ANLHGVNLLCPRVRRGCRFSISV*FTMGLK
Trigger: CTTCAACCCCATCGTGAACAAGACGGAGATCGAGAA...CCTGCAGCCCCTCCTCACCCTCGGACAGAGTAAATTCACGCCATGCAGGTTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000640909.2
CDS-3UTR CAA 90 bp ACCGTGCCCAGCCTCCTGGTCCCTTTTTATAGGGACGAACTCACCTTAGTAGACCGCACTTGCGTGCCATaGCGAACGTTCTCGATCTCC +
Preference number: 5 (lower is better)
Translates to: TVPSLLVPFYRDELTLVDRTCVP*RTFSIS
Trigger: GGAGATCGAGAACGTTCGCAATGGCACGCAAGTGCG...GTCTACTAAGGTGAGTTCGTCCCTATAAAAAGGGACCAGGAGGCTGGGCACGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000640909.2
CDS-3UTR CAA 90 bp GCAAACCTGCATGGCGTGAATTTACTCTGTCCGAGGGTGAGGAGGGGCTGCAGGATGAACTCTACCTTGTaGGGGCAGAAGATGACACGC +
Preference number: 5 (lower is better)
Translates to: ANLHGVNLLCPRVRRGCRMNSTL*GQKMTR
Trigger: GCGTGTCATCTTCTGCCCCAACAAGGTAGAGTTCAT...CCTGCAGCCCCTCCTCACCCTCGGACAGAGTAAATTCACGCCATGCAGGTTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000640909.2
CDS-3UTR CAA 90 bp GGACTTGACCTGCCATCTGCAAGAGCAGCCTGGGGGAGTCAAGGCTCCTCCTGCTTGATGAACTCTACCTaGTTGGGGCAGAAGATGACA +
Preference number: 5 (lower is better)
Translates to: GLDLPSARAAWGSQGSSCLMNST*LGQKMT
Trigger: TGTCATCTTCTGCCCCAACAAGGTAGAGTTCATCAA...GCAGGAGGAGCCTTGACTCCCCCAGGCTGCTCTTGCAGATGGCAGGTCAAGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675775.1
CDS-3UTR CAA 90 bp ATCCTCTACGGTCAGTTACCATTTGGCCGTAGAAAAAGCTACGTCCGTCCTAGTCTGGCGCTGGGGTCATaGGGCTGTGCCCCTATCCTC +
Preference number: 5 (lower is better)
Translates to: ILYGQLPFGRRKSYVRPSLALGS*GCAPIL
Trigger: GAGGATAGGGGCACAGCCCAATGACCCCAGCGCCAG...ACTAGGACGGACGTAGCTTTTTCTACGGCCAAATGGTAACTGACCGTAGAGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000265969.8
CDS-3UTR CAA 90 bp AGAGGGCCTAGTGGTAGAAATGGTAAGTCTTGGGTATTGACTGAGTCAGCTTGCCTGGCGCTGGGGTCATaGGGCTGTGCCCCTATCCTC +
Preference number: 5 (lower is better)
Translates to: RGPSGRNGKSWVLTESACLALGS*GCAPIL
Trigger: GAGGATAGGGGCACAGCCCAATGACCCCAGCGCCAG...GCAAGCTGACTCAGTCAATACCCAAGACTTACCATTTCTACCACTAGGCCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS-3UTR CAA 90 bp CCATGCCAAGAACACGGATCTTGTGTAGCTAAGTTCACAGGGTCCTGGCCCACTACGCGTACTCCCCGGTaGATAAGAGGAAGCAGGGTC +
Preference number: 5 (lower is better)
Translates to: PCQEHGSCVAKFTGSWPTTRTPR*IRGSRV
Trigger: GACCCTGCTTCCTCTTATCAACCGGGGAGTACGCGT...AGTGGGCCAGGACCCTGTGAACTTAGCTACACAAGATCCGTGTTCTTGGCATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638825.1
ENST00000675775.1
CDS-3UTR CAA 90 bp GGAGTGAGGGCCTGGTCTATGTGGGGGCAGTCTTCGTTCGCCAGCGCGGCCTTCATGACAGGGCTTTCTTaGCAAAGATCCTTTCTCATT +
Preference number: 5 (lower is better)
Translates to: GVRAWSMWGQSSFASAAFMTGLS*QRSFLI
Trigger: AATGAGAAAGGATCTTTGCAAAGAAAGCCCTGTCAT...GAAGGCCGCGCTGGCGAACGAAGACTGCCCCCACATAGACCAGGCCCTCACTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638366.1
CDS-3UTR CAA 90 bp GCTACGTCCGTCCTAGTACAATGCCTGGGCCACTCGGACTCGTCCGGCAAACCTACGGTCAGTTACCATTaGGCCGTAGAAAAAGCTACG +
Preference number: 5 (lower is better)
Translates to: ATSVLVQCLGHSDSSGKPTVSYH*AVEKAT
Trigger: CGTAGCTTTTTCTACGGCCAAATGGTAACTGACCGT...AGGTTTGCCGGACGAGTCCGAGTGGCCCAGGCATTGTACTAGGACGGACGTAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265969.8
ENST00000638366.1
ENST00000638825.1
CDS-3UTR CAA 90 bp ACTCGTCCGGCAAACCTGCATGGCGTGAATTTACTCTGTCCGAGGGTGAGGAGGAGGGGGTTGGTGGGTTaGGTTTGCTGGGTTTTCTGT +
Preference number: 5 (lower is better)
Translates to: TRPANLHGVNLLCPRVRRRGLVG*VCWVFC
Trigger: ACAGAAAACCCAGCAAACCAAACCCACCAACCCCCT...CCTCCTCACCCTCGGACAGAGTAAATTCACGCCATGCAGGTTTGCCGGACGAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000638825.1
CDS-3UTR CAA 90 bp CAATGCCTGGGCCACTCGGACTCGTCCGGCAAACCTGCATGGCGTGAATTTACTGAACGCCGTTACAGTTaGGCTCCAACAACGTGTGTG +
Preference number: 5 (lower is better)
Translates to: QCLGHSDSSGKPAWREFTERRYS*APTTCV
Trigger: CACACACGTTGTTGGAGCCAAACTGTAACGGCGTTC...AGTAAATTCACGCCATGCAGGTTTGCCGGACGAGTCCGAGTGGCCCAGGCATTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000638825.1
CDS-3UTR CAA 90 bp GGCGTGAATTTACTCTGTCCGAGGGTGAGGAGGGGCTGCAGGTCCACCCAGATGGCATACAATGCCAGGTaGTGCCTTAGTAAAGGTGGA +
Preference number: 5 (lower is better)
Translates to: GVNLLCPRVRRGCRSTQMAYNAR*CLSKGG
Trigger: TCCACCTTTACTAAGGCACAACCTGGCATTGTATGC...CATCTGGGTGGACCTGCAGCCCCTCCTCACCCTCGGACAGAGTAAATTCACGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265969.8
CDS-3UTR CAA 90 bp TCGGAGACCCCTGGCCATGTTCCTCTCAGGCACCTACAGAAATCCCAGGAAGGGGTGGTAGAAGATGAGTaGGTTCAGCATGCTATGGGG +
Preference number: 5 (lower is better)
Translates to: SETPGHVPLRHLQKSQEGVVEDE*VQHAMG
Trigger: CCCCATAGCATGCTGAACCAACTCATCTTCTACCAC...CCCTTCCTGGGATTTCTGTAGGTGCCTGAGAGGAACATGGCCAGGGGTCTCCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CAA 90 bp ACAGCTGGCTTTTCTGCCCTGGTCTCCAGGCACCGCCAAAGTACTTACTGTTCAGCAAAGAAATGGGCCTaGAGGGTAGTGCTCGGGCCA +
Preference number: 5 (lower is better)
Translates to: TAGFSALVSRHRQSTYCSAKKWA*RVVLGP
Trigger: TGGCCCGAGCACTACCCTCAAGGCCCATTTCTTTGC...TGAACAGTAAGTACTTTGGCGGTGCCTGGAGACCAGGGCAGAAAAGCCAGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CAA 90 bp CAGATCAAAGGCTGTCTAGCGTTTCCAAATCACACCCGCCCCCACTCTGTCCCACTCACACGCCAGCTTTaGGAGGGAGAAGTGTTCTGG +
Preference number: 5 (lower is better)
Translates to: QIKGCLAFPNHTRPHSVPLTRQL*EGEVFW
Trigger: CCAGAACACTTCTCCCTCCAAAAGCTGGCGTGTGAG...TGGGACAGAGTGGGGGCGGGTGTGATTTGGAAACGCTAGACAGCCTTTGATCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CAA 90 bp ACAGCTGGCTTTTCTGCCCTGGTCTCCAGGCACCGCCAAAGTACTTACTGTTCAGGAGAAGCTCAGGTTTaGGCGAGGCCACTAGACTGC +
Preference number: 5 (lower is better)
Translates to: TAGFSALVSRHRQSTYCSGEAQV*ARPLDC
Trigger: GCAGTCTAGTGGCCTCGCCAAAACCTGAGCTTCTCC...TGAACAGTAAGTACTTTGGCGGTGCCTGGAGACCAGGGCAGAAAAGCCAGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CAA 90 bp TGTGAGGGCCCCAAATACTTCCTCAGCCACAGAGACTGTCCAAGCCAGAACTGTGAGGGGAGTGAGGACTaGCTGAGTCTCTGTTGGCCA +
Preference number: 5 (lower is better)
Translates to: CEGPKYFLSHRDCPSQNCEGSED*LSLCWP
Trigger: TGGCCAACAGAGACTCAGCAAGTCCTCACTCCCCTC...ACAGTTCTGGCTTGGACAGTCTCTGTGGCTGAGGAAGTATTTGGGGCCCTCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CAA 90 bp AGACTAAATGCCACCTGTCACGTCAACCTCCTGCTCACCTGGCACTCCTTCTTAATGACGATGTGGGGGTaGAGGCCCATAGCACCCTGC +
Preference number: 5 (lower is better)
Translates to: RLNATCHVNLLLTWHSFLMTMWG*RPIAPC
Trigger: GCAGGGTGCTATGGGCCTCAACCCCCACATCGTCAT...TAAGAAGGAGTGCCAGGTGAGCAGGAGGTTGACGTGACAGGTGGCATTTAGTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CAA 90 bp CACCACTCAGCCCAGGCCCCTTTGCTTCAAATCGTGTCTCAGAGGGAGAACAGTGCAAAGGGGTCTCTTTaGGCTGCCAAAAGGCTCCAG +
Preference number: 5 (lower is better)
Translates to: HHSAQAPLLQIVSQRENSAKGSL*AAKRLQ
Trigger: CTGGAGCCTTTTGGCAGCCAAAAGAGACCCCTTTGC...ACTGTTCTCCCTCTGAGACACGATTTGAAGCAAAGGGGCCTGGGCTGAGTGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS-3UTR CAA 90 bp CACCACTCAGCCCAGGCCCCTTTGCTTCAAATCGTGTCTCAGAGGGAGAACAGTTCAAGGAGGAGAACCTaGTCCTGGGTACTCTGCAGC +
Preference number: 5 (lower is better)
Translates to: HHSAQAPLLQIVSQRENSSRRRT*SWVLCS
Trigger: GCTGCAGAGTACCCAGGACAAGGTTCTCCTCCTTGA...ACTGTTCTCCCTCTGAGACACGATTTGAAGCAAAGGGGCCTGGGCTGAGTGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS-3UTR CAA 90 bp AAGAGAGGGCCTAGTGGTAGAAATGGTAAGTCTTGGGTATTGACTGAGTCAGCTCTGAGCGCCAGGCGCTaGGTCATCTCCAGCTCGTCC +
Preference number: 5 (lower is better)
Translates to: KRGPSGRNGKSWVLTESALSARR*VISSSS
Trigger: GGACGAGCTGGAGATGACCAAGCGCCTGGCGCTCAG...AGCTGACTCAGTCAATACCCAAGACTTACCATTTCTACCACTAGGCCCTCTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000639325.2
ENST00000640318.2
CDS-3UTR CAA 90 bp CAGAGGGAGAACAGTAGTTCCCCTTATCTGCAGTTGCACTTTCTACAGTTTCTGCTGAGCGCCAGGCGCTaGGTCATCTCCAGCTCGTCC +
Preference number: 5 (lower is better)
Translates to: QRENSSSPYLQLHFLQFLLSARR*VISSSS
Trigger: GGACGAGCTGGAGATGACCAAGCGCCTGGCGCTCAG...CAGAAACTGTAGAAAGTGCAACTGCAGATAAGGGGAACTACTGTTCTCCCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000639325.2
ENST00000640318.2
CDS-3UTR CAA 90 bp CTGGCTTGTGGATTGATTATCTTTCAAGGATGCCTCTTCCATGCCAAGAACACGCTGAGCGCCAGGCGCTaGGTCATCTCCAGCTCGTCC +
Preference number: 5 (lower is better)
Translates to: LACGLIIFQGCLFHAKNTLSARR*VISSSS
Trigger: GGACGAGCTGGAGATGACCAAGCGCCTGGCGCTCAG...CGTGTTCTTGGCATGGAAGAGGCATCCTTGAAAGATAATCAATCCACAAGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675775.1
CDS-3UTR CAA 90 bp ACTAAGAAAGCAGATCTCCCACCACTCAGCCCAGGCCCCTTTGCTTCAAATCGTTTGTTCACGATGGGGTaGAAGCGCTCGTGGGTCTCC +
Preference number: 5 (lower is better)
Translates to: TKKADLPPLSPGPFASNRLFTMG*KRSWVS
Trigger: GGAGACCCACGAGCGCTTCAACCCCATCGTGAACAA...ACGATTTGAAGCAAAGGGGCCTGGGCTGAGTGGTGGGAGATCTGCTTTCTTAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000639325.2
ENST00000640318.2
CDS-3UTR CAA 90 bp ACTCGTCCGGCAAACCTGCATGGCGTGAATTTACTCTGTCCGAGGGTGAGGAGGTTCTCGATCTCCGTCTaGTTCACGATGGGGTTGAAG +
Preference number: 5 (lower is better)
Translates to: TRPANLHGVNLLCPRVRRFSISV*FTMGLK
Trigger: CTTCAACCCCATCGTGAACAAGACGGAGATCGAGAA...CCTCCTCACCCTCGGACAGAGTAAATTCACGCCATGCAGGTTTGCCGGACGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000640909.2
CDS-3UTR CAA 90 bp AGCCACAGCACACAGGAGGAGACCAGATTGTCCCTGGGACAGACACACAGACTGTTCTCGATCTCCGTCTaGTTCACGATGGGGTTGAAG +
Preference number: 5 (lower is better)
Translates to: SHSTQEETRLSLGQTHRLFSISV*FTMGLK
Trigger: CTTCAACCCCATCGTGAACAAGACGGAGATCGAGAA...CAGTCTGTGTGTCTGTCCCAGGGACAATCTGGTCTCCTCCTGTGTGCTGTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CAA 90 bp ATTCAAGTCTTAGAAGGGGCAGTGATATGTTTCAGTTGTGAGCCAGCCAGAGGACTGGCGCTGGGGTCATaGGGCTGTGCCCCTATCCTC +
Preference number: 5 (lower is better)
Translates to: IQVLEGAVICFSCEPARGLALGS*GCAPIL
Trigger: GAGGATAGGGGCACAGCCCAATGACCCCAGCGCCAG...TCCTCTGGCTGGCTCACAACTGAAACATATCACTGCCCCTTCTAAGACTTGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS-3UTR CAA 90 bp ACTAAGAAAGCAGATCTCCCACCACTCAGCCCAGGCCCCTTTGCTTCAAATCGTACGCGTACTCCCCGGTaGATAAGAGGAAGCAGGGTC +
Preference number: 5 (lower is better)
Translates to: TKKADLPPLSPGPFASNRTRTPR*IRGSRV
Trigger: GACCCTGCTTCCTCTTATCAACCGGGGAGTACGCGT...ACGATTTGAAGCAAAGGGGCCTGGGCTGAGTGGTGGGAGATCTGCTTTCTTAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000639325.2
ENST00000640318.2
CDS-3UTR CAA 90 bp CTAGCATCCCCCAAGAGGTCCTACAACCAGGTGAGAATTGGATTCTTGATACCCCAGGCTGAGCTCTTCTaGCCAGGCCCACATGGAAGC +
Preference number: 5 (lower is better)
Translates to: LASPKRSYNQVRIGFLIPQAELF*PGPHGS
Trigger: GCTTCCATGTGGGCCTGGCAAGAAGAGCTCAGCCTG...GGGTATCAAGAATCCAATTCTCACCTGGTTGTAGGACCTCTTGGGGGATGCTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CAA 90 bp CAGGCACCGCCAAAGTACTTACTGTTCACACCAGCTGCGGGCACCGGAGGGGCGAGGATAATACTGTCATaGTCCAAGAGTACAGAGGAA +
Preference number: 5 (lower is better)
Translates to: QAPPKYLLFTPAAGTGGARIILS*SKSTEE
Trigger: TTCCTCTGTACTCTTGGACAATGACAGTATTATCCT...CGCCCCTCCGGTGCCCGCAGCTGGTGTGAACAGTAAGTACTTTGGCGGTGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CAA 90 bp TGGGAGAGGGGAGGGAAACAGTATGGAGAGGACGCGGATGACGATGTGGGGGTTTGGGTTTTACAGGTTTaGTGTCCTGGGATTAGCTGG +
Preference number: 5 (lower is better)
Translates to: WERGGKQYGEDADDDVGVWVLQV*CPGISW
Trigger: CCAGCTAATCCCAGGACACAAAACCTGTAAAACCCA...AACCCCCACATCGTCATCCGCGTCCTCTCCATACTGTTTCCCTCCCCTCTCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CAA 90 bp GTGAATTTACTCTGTCCGAGGGTGAGGAGGGGCTGCAGGTCCACCCAGATGCTTACCTCCCCATTCAGTTaGGAATCTGGCACTCCTTCT +
Preference number: 5 (lower is better)
Translates to: VNLLCPRVRRGCRSTQMLTSPFS*ESGTPS
Trigger: AGAAGGAGTGCCAGATTCCAAACTGAATGGGGAGGT...AAGCATCTGGGTGGACCTGCAGCCCCTCCTCACCCTCGGACAGAGTAAATTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638366.1
CDS-3UTR CAA 90 bp TGCCAAAAGGCTCCAGCTGCAGCCTGTCTCCATGAAGGCATAGAAGGGGACCATGGCAGAGAGGGTAACTaGCTCAAGGAGGAGAACCTT +
Preference number: 5 (lower is better)
Translates to: CQKAPAAACLHEGIEGDHGREGN*LKEENL
Trigger: AAGGTTCTCCTCCTTGAGCAAGTTACCCTCTCTGCC...ATGGTCCCCTTCTATGCCTTCATGGAGACAGGCTGCAGCTGGAGCCTTTTGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS-3UTR CAA 90 bp CACCACTCAGCCCAGGCCCCTTTGCTTCAAATCGTGTCTCAGAGGGAGAACAGTGGCAGAGAGGGTAACTaGCTCAAGGAGGAGAACCTT +
Preference number: 5 (lower is better)
Translates to: HHSAQAPLLQIVSQRENSGREGN*LKEENL
Trigger: AAGGTTCTCCTCCTTGAGCAAGTTACCCTCTCTGCC...ACTGTTCTCCCTCTGAGACACGATTTGAAGCAAAGGGGCCTGGGCTGAGTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS-3UTR CAA 90 bp AGAAAAAGCTACGTCCGTCCTAGTACAATGCCTGGGCCACTCGGACTCGTCCGGCTGCAGAGTGACCATTaGGCCGTAGAAAAAGCTACG +
Preference number: 5 (lower is better)
Translates to: RKSYVRPSTMPGPLGLVRLQSDH*AVEKAT
Trigger: CGTAGCTTTTTCTACGGCCAAATGGTCACTCTGCAG...CCGGACGAGTCCGAGTGGCCCAGGCATTGTACTAGGACGGACGTAGCTTTTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000640909.2
CDS-3UTR CAA 90 bp GCCAGCCTAGCACGCCTCTTTCTCTCCCTCCTGGGGGAATGGGATGAGTCCCTACCTCTGGCTTGTGGATaGATTATCTTTCAAGGATGC +
Preference number: 5 (lower is better)
Translates to: ASLARLFLSLLGEWDESLPLACG*IIFQGC
Trigger: GCATCCTTGAAAGATAATCAATCCACAAGCCAGAGG...TAGGGACTCATCCCATTCCCCCAGGAGGGAGAGAAAGAGGCGTGCTAGGCTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638825.1
CDS-3UTR CAA 90 bp CCACAGCTGCCAGGGCCTCAAGTTCTCTCTGCCAGCCTGACATCTCACTTGGGGCCTCTGGCTTGTGGATaGATTATCTTTCAAGGATGC +
Preference number: 5 (lower is better)
Translates to: PQLPGPQVLSASLTSHLGPLACG*IIFQGC
Trigger: GCATCCTTGAAAGATAATCAATCCACAAGCCAGAGG...CCCCAAGTGAGATGTCAGGCTGGCAGAGAGAACTTGAGGCCCTGGCAGCTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638825.1
ENST00000675775.1
CDS-3UTR CAA 90 bp TCGGACCAGAGCCCCATGATCAACTTTATGTGCTATGTGCAGGTTCTCATAAAATTCTCCTGGCTGGGTTaGATTTGCGGGGCCGGCGGG +
Preference number: 5 (lower is better)
Translates to: SDQSPMINFMCYVQVLIKFSWLG*ICGAGG
Trigger: CCCGCCGGCCCCGCAAATCAAACCCAGCCAGGAGAA...TTTTATGAGAACCTGCACATAGCACATAAAGTTGATCATGGGGCTCTGGTCCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CAA 90 bp AGACTAAATGCCACCTGTCACGTCAACCTCCTGCTCACCTGGCACTCCTTCTTAATCGGCACAAAGCTTTaGGGGGAAAGGTCAGCCGCT +
Preference number: 5 (lower is better)
Translates to: RLNATCHVNLLLTWHSFLIGTKL*GERSAA
Trigger: AGCGGCTGACCTTTCCCCCAAAAGCTTTGTGCCGAT...TAAGAAGGAGTGCCAGGTGAGCAGGAGGTTGACGTGACAGGTGGCATTTAGTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CAA 90 bp GATGACCATGGTATACTTGGGAATGTTGGGTTTATAGAATTAAAGTGGGTTGGTGCCTCTCCGGGCGCTTaGTCGGGTGCCGGTCCAGGG +
Preference number: 5 (lower is better)
Translates to: DDHGILGNVGFIELKWVGASPGA*SGAGPG
Trigger: CCCTGGACCGGCACCCGACAAAGCGCCCGGAGAGGC...ACCAACCCACTTTAATTCTATAAACCCAACATTCCCAAGTATACCATGGTCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000639325.2
ENST00000640318.2
CDS-3UTR CAA 90 bp TTTTATAGGGACGAACTCACCTTAGTAGACTTTCCAGATTCCAAGAAGCTATTGGCCTCTCCGGGCGCTTaGTCGGGTGCCGGTCCAGGG +
Preference number: 5 (lower is better)
Translates to: FYRDELTLVDFPDSKKLLASPGA*SGAGPG
Trigger: CCCTGGACCGGCACCCGACAAAGCGCCCGGAGAGGC...CAATAGCTTCTTGGAATCTGGAAAGTCTACTAAGGTGAGTTCGTCCCTATAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640909.2
CDS-3UTR CAA 90 bp AAGTTTCACATTTTGAGTAGCGTGATGAAATCTCATGCCATGTCACTCCATCCCCGCGTGCCGCCCACGTaGATCACGATGCGCTCGCTC +
Preference number: 5 (lower is better)
Translates to: KFHILSSVMKSHAMSLHPRVPPT*ITMRSL
Trigger: GAGCGAGCGCATCGTGATCAACGTGGGCGGCACGCG...GGGATGGAGTGACATGGCATGAGATTTCATCACGCTACTCAAAATGTGAAACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000639325.2
ENST00000640318.2
CDS-3UTR CAA 90 bp CATTCTAGAGAGAGCCTGCAAAGTACAGATGACCATGGTATACTTGGGAATGTTCGCGTGCCGCCCACGTaGATCACGATGCGCTCGCTC +
Preference number: 5 (lower is better)
Translates to: HSRESLQSTDDHGILGNVRVPPT*ITMRSL
Trigger: GAGCGAGCGCATCGTGATCAACGTGGGCGGCACGCG...AACATTCCCAAGTATACCATGGTCATCTGTACTTTGCAGGCTCTCTCTAGAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000639325.2
ENST00000640318.2
CDS-3UTR CAA 90 bp CTAGCATCCCCCAAGAGGTCCTACAACCAGGTGAGAATTGGATTCTTGATACCCTTGTTCACGATGGGGTaGAAGCGCTCGTGGGTCTCC +
Preference number: 5 (lower is better)
Translates to: LASPKRSYNQVRIGFLIPLFTMG*KRSWVS
Trigger: GGAGACCCACGAGCGCTTCAACCCCATCGTGAACAA...GGGTATCAAGAATCCAATTCTCACCTGGTTGTAGGACCTCTTGGGGGATGCTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CAA 90 bp GTGGGGATGTGGTTTTCAGTATCTTGCATTACAGGACCACATCTGTGCCCACACCCGGTAGTAGCGCACTaGCGTGCCATTGCGAACGTT +
Preference number: 5 (lower is better)
Translates to: VGMWFSVSCITGPHLCPHPVVAH*RAIANV
Trigger: AACGTTCGCAATGGCACGCAAGTGCGCTACTACCGG...GTGTGGGCACAGATGTGGTCCTGTAATGCAAGATACTGAAAACCACATCCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000639325.2
ENST00000640318.2
CDS-3UTR CAA 90 bp GAAAAAGCTACGTCCGTCCTAGTACAATGCCTGGGCCACTCGGACTCGTCCGGCTTGATGAACTCTACCTaGTTGGGGCAGAAGATGACA +
Preference number: 5 (lower is better)
Translates to: EKATSVLVQCLGHSDSSGLMNST*LGQKMT
Trigger: TGTCATCTTCTGCCCCAACAAGGTAGAGTTCATCAA...GCCGGACGAGTCCGAGTGGCCCAGGCATTGTACTAGGACGGACGTAGCTTTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000640909.2
CDS-3UTR CAA 90 bp GCTACGTCCGTCCTAGTACAATGCCTGGGCCACTCGGACTCGTCCGGCAAACCTACCTCCCCATTCAGTTaGGAATCTGCTCTGTTAATT +
Preference number: 5 (lower is better)
Translates to: ATSVLVQCLGHSDSSGKPTSPFS*ESALLI
Trigger: AATTAACAGAGCAGATTCCAAACTGAATGGGGAGGT...AGGTTTGCCGGACGAGTCCGAGTGGCCCAGGCATTGTACTAGGACGGACGTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265969.8
ENST00000638825.1
ENST00000640909.2
CDS-3UTR CAA 90 bp GGCCGTAGAAAAAGCTACGTCCGTCCTAGTACAATGCCTGGGCCACTCGGACTCACGGTCAGTTACCATTaGGCCGTAGAAAAAGCTACG +
Preference number: 5 (lower is better)
Translates to: GRRKSYVRPSTMPGPLGLTVSYH*AVEKAT
Trigger: CGTAGCTTTTTCTACGGCCAAATGGTAACTGACCGT...GAGTCCGAGTGGCCCAGGCATTGTACTAGGACGGACGTAGCTTTTTCTACGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000265969.8
ENST00000638366.1
ENST00000638825.1
CDS-3UTR CAA 90 bp CCGGCAAACCTGCATGGCGTGAATTTACTCTGTCCGAGGGTGAGGAGGGGCTGCTCGCTTTGCATAACATaGGGCATGCAGGTTTTTACT +
Preference number: 5 (lower is better)
Translates to: PANLHGVNLLCPRVRRGCSLCIT*GMQVFT
Trigger: AGTAAAAACCTGCATGCCCAATGTTATGCAAAGCGA...GCAGCCCCTCCTCACCCTCGGACAGAGTAAATTCACGCCATGCAGGTTTGCCGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265969.8
CDS-3UTR CAA 90 bp TCCGGCAAACCTGCATGGCGTGAATTTACTCTGTCCGAGGGTGAGGAGGGGCTGCATGCTAGAATCGCTTaGCATAACATTGGGCATGCA +
Preference number: 5 (lower is better)
Translates to: SGKPAWREFTLSEGEEGLHARIA*HNIGHA
Trigger: TGCATGCCCAATGTTATGCAAAGCGATTCTAGCATG...CAGCCCCTCCTCACCCTCGGACAGAGTAAATTCACGCCATGCAGGTTTGCCGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265969.8
CDS-3UTR CAA 90 bp TCGGACCAGAGCCCCATGATCAACTTTATGTGCTATGTGCAGGTTCTCATAAAACCCTTGCACCTGCCTTaGCAAGGGACCCTCCTGCCC +
Preference number: 5 (lower is better)
Translates to: SDQSPMINFMCYVQVLIKPLHLP*QGTLLP
Trigger: GGGCAGGAGGGTCCCTTGCAAAGGCAGGTGCAAGGG...TTTTATGAGAACCTGCACATAGCACATAAAGTTGATCATGGGGCTCTGGTCCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CAA 90 bp AGCCACAGCACACAGGAGGAGACCAGATTGTCCCTGGGACAGACACACAGACTGGTGGTTGTACACTGGTaGGGATGTCTATATTGCTGC +
Preference number: 5 (lower is better)
Translates to: SHSTQEETRLSLGQTHRLVVVHW*GCLYCC
Trigger: GCAGCAATATAGACATCCCAACCAGTGTACAACCAC...CAGTCTGTGTGTCTGTCCCAGGGACAATCTGGTCTCCTCCTGTGTGCTGTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CAA 90 bp GGCGTGAATTTACTCTGTCCGAGGGTGAGGAGGGGCTGCAGGTCCACCCAGATGGATTCCAAGAAGCTATaGCAAAGGTTGAGTCCTCAA +
Preference number: 5 (lower is better)
Translates to: GVNLLCPRVRRGCRSTQMDSKKL*QRLSPQ
Trigger: TTGAGGACTCAACCTTTGCAATAGCTTCTTGGAATC...CATCTGGGTGGACCTGCAGCCCCTCCTCACCCTCGGACAGAGTAAATTCACGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640909.2
CDS-3UTR CAA 90 bp GAGAGCCTGCAAAGTACAGATGACCATGGTATACTTGGGAATGTTGGGTTTATATTCTCCTGGCTGGGTTaGATTTGCGGGGCCGGCGGG +
Preference number: 5 (lower is better)
Translates to: ESLQSTDDHGILGNVGFIFSWLG*ICGAGG
Trigger: CCCGCCGGCCCCGCAAATCAAACCCAGCCAGGAGAA...TATAAACCCAACATTCCCAAGTATACCATGGTCATCTGTACTTTGCAGGCTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000639325.2
ENST00000640318.2
CDS-3UTR CAA 90 bp CAAAGGATGATGAATTCAGGATCTAAAGGGTGGAATATGAAAAGAAGTCAACAACTCGCTCTCGTCCCCTaGGCCCATCGCGGCGCCCCC +
Preference number: 5 (lower is better)
Translates to: QRMMNSGSKGWNMKRSQQLALVP*AHRGAP
Trigger: GGGGGCGCCGCGATGGGCCAAGGGGACGAGAGCGAG...TTGTTGACTTCTTTTCATATTCCACCCTTTAGATCCTGAATTCATCATCCTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000639325.2
ENST00000640318.2
CDS-3UTR CAA 90 bp CCCCCAGAAATGTACAGGTTTCTACTGAACGCCGTTACAGTTTGGCTCCAACAATTGTTCACGATGGGGTaGAAGCGCTCGTGGGTCTCC +
Preference number: 5 (lower is better)
Translates to: PPEMYRFLLNAVTVWLQQLFTMG*KRSWVS
Trigger: GGAGACCCACGAGCGCTTCAACCCCATCGTGAACAA...TTGTTGGAGCCAAACTGTAACGGCGTTCAGTAGAAACCTGTACATTTCTGGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265969.8
CDS-3UTR CAA 90 bp GCCACTCGGACTCGTCCGGCAAACCTGCATGGCGTGAATTTACTCTGTCCGAGGATGTTGAGCGAGTTCTaGATGAACTCTACCTTGTTG +
Preference number: 5 (lower is better)
Translates to: ATRTRPANLHGVNLLCPRMLSEF*MNSTLL
Trigger: CAACAAGGTAGAGTTCATCAAGAACTCGCTCAACAT...CCTCGGACAGAGTAAATTCACGCCATGCAGGTTTGCCGGACGAGTCCGAGTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000640909.2
CDS-3UTR CAA 90 bp AAGCAGAGAGCTCGGAGCTGTTTCAGCCTCGGAGACCCCTGGCCATGTTCCTCTATGTTGAGCGAGTTCTaGATGAACTCTACCTTGTTG +
Preference number: 5 (lower is better)
Translates to: KQRARSCFSLGDPWPCSSMLSEF*MNSTLL
Trigger: CAACAAGGTAGAGTTCATCAAGAACTCGCTCAACAT...AGAGGAACATGGCCAGGGGTCTCCGAGGCTGAAACAGCTCCGAGCTCTCTGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CAA 90 bp CATGAAAGAAACTCAGCTCTGCTCCTTCCTAGCAATGCAACGTTGAGTGAATTACTGGCGCTGGGGTCATaGGGCTGTGCCCCTATCCTC +
Preference number: 5 (lower is better)
Translates to: HERNSALLLPSNATLSELLALGS*GCAPIL
Trigger: GAGGATAGGGGCACAGCCCAATGACCCCAGCGCCAG...TAATTCACTCAACGTTGCATTGCTAGGAAGGAGCAGAGCTGAGTTTCTTTCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639495.1
CDS-3UTR CAA 90 bp GCCTGGGCCACTCGGACTCGTCCGGCAAACCTGCATGGCGTGAATTTACTCTGTACCTCCCCATTCAGTTaGGAATCTGCTCTGTTAATT +
Preference number: 5 (lower is better)
Translates to: AWATRTRPANLHGVNLLCTSPFS*ESALLI
Trigger: AATTAACAGAGCAGATTCCAAACTGAATGGGGAGGT...ACAGAGTAAATTCACGCCATGCAGGTTTGCCGGACGAGTCCGAGTGGCCCAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265969.8
ENST00000638825.1
ENST00000640909.2
CDS-3UTR CAA 90 bp CTGCAAGGACAATGGCCTTACCCCCAAGCCCTGAAGACATCTCTCTCTTCTTGCAGGGTAATCATACAGTaGCAGGGGGTTGGTGGGTTT +
Preference number: 5 (lower is better)
Translates to: LQGQWPYPQALKTSLSSCRVIIQ*QGVGGF
Trigger: AAACCCACCAACCCCCTGCAACTGTATGATTACCCT...GCAAGAAGAGAGAGATGTCTTCAGGGCTTGGGGGTAAGGCCATTGTCCTTGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000638825.1
CDS-3UTR CAA 90 bp GCTACGTCCGTCCTAGTACAATGCCTGGGCCACTCGGACTCGTCCGGCAAACCTTTGGAAGCTTTCCTCTaGATCTTGTGTACAAAAAGG +
Preference number: 5 (lower is better)
Translates to: ATSVLVQCLGHSDSSGKPLEAFL*ILCTKR
Trigger: CCTTTTTGTACACAAGATCAAGAGGAAAGCTTCCAA...AGGTTTGCCGGACGAGTCCGAGTGGCCCAGGCATTGTACTAGGACGGACGTAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000638825.1
CDS-3UTR CAA 90 bp GTGAGGGCCCCAAATACTTCCTCAGCCACAGAGACTGTCCAAGCCAGAACTGTCGTGAGAATTGGATTCTaGATACCCCTCCCAGGACAA +
Preference number: 5 (lower is better)
Translates to: VRAPNTSSATETVQARTVVRIGF*IPLPGQ
Trigger: TTGTCCTGGGAGGGGTATCAAGAATCCAATTCTCAC...GACAGTTCTGGCTTGGACAGTCTCTGTGGCTGAGGAAGTATTTGGGGCCCTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CAA 90 bp TCGGACCAGAGCCCCATGATCAACTTTATGTGCTATGTGCAGGTTCTCATAAAAAGGACGGAGGAGGCATaGTGGGCTGTCCAGAGTGGG +
Preference number: 5 (lower is better)
Translates to: SDQSPMINFMCYVQVLIKRTEEA*WAVQSG
Trigger: CCCACTCTGGACAGCCCACAATGCCTCCTCCGTCCT...TTTTATGAGAACCTGCACATAGCACATAAAGTTGATCATGGGGCTCTGGTCCGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CAA 90 bp CAGAGGACCTGCCCAGGCAGACTAAGAAAGCAGATCTCCCACCACTCAGCCCAGGATTCCAAGAAGCTATaGCAAAGGTTGAGTCCTCAA +
Preference number: 5 (lower is better)
Translates to: QRTCPGRLRKQISHHSAQDSKKL*QRLSPQ
Trigger: TTGAGGACTCAACCTTTGCAATAGCTTCTTGGAATC...CTGGGCTGAGTGGTGGGAGATCTGCTTTCTTAGTCTGCCTGGGCAGGTCCTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS-3UTR CAA 90 bp GTGGGGATGTGGTTTTCAGTATCTTGCATTACAGGACCACATCTGTGCCCACACTCAAGGAGGAGAACCTaGTCCTGGGTACTCTGCAGC +
Preference number: 5 (lower is better)
Translates to: VGMWFSVSCITGPHLCPHSRRRT*SWVLCS
Trigger: GCTGCAGAGTACCCAGGACAAGGTTCTCCTCCTTGA...GTGTGGGCACAGATGTGGTCCTGTAATGCAAGATACTGAAAACCACATCCCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS-3UTR CAA 90 bp TCGGACTCGTCCGGCAAACCTGCATGGCGTGAATTTACTCTGTCCGAGGGTGAGTCTCCTCCCTCTGGCTaGTGGATTGATTATCTTTCA +
Preference number: 5 (lower is better)
Translates to: SDSSGKPAWREFTLSEGESPPSG*WIDYLS
Trigger: TGAAAGATAATCAATCCACAAGCCAGAGGGAGGAGA...CTCACCCTCGGACAGAGTAAATTCACGCCATGCAGGTTTGCCGGACGAGTCCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638825.1
CDS-3UTR CAA 90 bp TCAATAGGAACTCCATACGTGGATACATGGGAAGGCTCTGTCTCCCTGAGGAAAATCGGCACAAAGCTTTaGGGGGAAAGGTCAGCCGCT +
Preference number: 5 (lower is better)
Translates to: SIGTPYVDTWEGSVSLRKIGTKL*GERSAA
Trigger: AGCGGCTGACCTTTCCCCCAAAAGCTTTGTGCCGAT...TTTCCTCAGGGAGACAGAGCCTTCCCATGTATCCACGTATGGAGTTCCTATTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000640909.2
CDS-3UTR CAA 90 bp AAGAGAGGGCCTAGTGGTAGAAATGGTAAGTCTTGGGTATTGACTGAGTCAGCTTTGTTCACGATGGGGTaGAAGCGCTCGTGGGTCTCC +
Preference number: 5 (lower is better)
Translates to: KRGPSGRNGKSWVLTESALFTMG*KRSWVS
Trigger: GGAGACCCACGAGCGCTTCAACCCCATCGTGAACAA...AGCTGACTCAGTCAATACCCAAGACTTACCATTTCTACCACTAGGCCCTCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000639325.2
ENST00000640318.2
CDS-3UTR CAA 90 bp CAGAGGGAGAACAGTAGTTCCCCTTATCTGCAGTTGCACTTTCTACAGTTTCTGCGCACTTGCGTGCCATaGCGAACGTTCTCGATCTCC +
Preference number: 5 (lower is better)
Translates to: QRENSSSPYLQLHFLQFLRTCVP*RTFSIS
Trigger: GGAGATCGAGAACGTTCGCAATGGCACGCAAGTGCG...CAGAAACTGTAGAAAGTGCAACTGCAGATAAGGGGAACTACTGTTCTCCCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000639325.2
ENST00000640318.2
CDS-3UTR CAA 90 bp AAGAGAGGGCCTAGTGGTAGAAATGGTAAGTCTTGGGTATTGACTGAGTCAGCTCCGGTAGTAGCGCACTaGCGTGCCATTGCGAACGTT +
Preference number: 5 (lower is better)
Translates to: KRGPSGRNGKSWVLTESAPVVAH*RAIANV
Trigger: AACGTTCGCAATGGCACGCAAGTGCGCTACTACCGG...AGCTGACTCAGTCAATACCCAAGACTTACCATTTCTACCACTAGGCCCTCTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000639325.2
ENST00000640318.2
CDS-3UTR CAA 90 bp CTCTCAGGCACCTACAGAAATCCCAGGAAGGGAAGGGTATGCGGCAGGGTGAAATTGATGAACTCTACCTaGTTGGGGCAGAAGATGACA +
Preference number: 5 (lower is better)
Translates to: LSGTYRNPRKGRVCGRVKLMNST*LGQKMT
Trigger: TGTCATCTTCTGCCCCAACAAGGTAGAGTTCATCAA...TTTCACCCTGCCGCATACCCTTCCCTTCCTGGGATTTCTGTAGGTGCCTGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CAA 90 bp TCGGACCAGAGCCCCATGATCAACTTTATGTGCTATGTGCAGGTTCTCATAAAACTCGGTGGGAGGCTGTaGCTGGTCTGTAGCGCTTTC +
Preference number: 5 (lower is better)
Translates to: SDQSPMINFMCYVQVLIKLGGRL*LVCSAF
Trigger: GAAAGCGCTACAGACCAGCAACAGCCTCCCACCGAG...TTTTATGAGAACCTGCACATAGCACATAAAGTTGATCATGGGGCTCTGGTCCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CAA 90 bp AGACTAAATGCCACCTGTCACGTCAACCTCCTGCTCACCTGGCACTCCTTCTTAGGGTCATCTGTTCCTTaGAAATCCCTGTGTCCACAG +
Preference number: 5 (lower is better)
Translates to: RLNATCHVNLLLTWHSFLGSSVP*KSLCPQ
Trigger: CTGTGGACACAGGGATTTCAAAGGAACAGATGACCC...TAAGAAGGAGTGCCAGGTGAGCAGGAGGTTGACGTGACAGGTGGCATTTAGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CAA 90 bp CCAGAGCCCCATGATCAACTTTATGTGCTATGTGCAGGTTCTCATAAAACTGAGCCACATTTACCTTCCTaGCCCCTGGCCTCCCCCTCA +
Preference number: 5 (lower is better)
Translates to: PEPHDQLYVLCAGSHKTEPHLPS*PLASPS
Trigger: TGAGGGGGAGGCCAGGGGCAAGGAAGGTAAATGTGG...CTCAGTTTTATGAGAACCTGCACATAGCACATAAAGTTGATCATGGGGCTCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CAA 90 bp AATAGCCACCAGTGTCCTCGGCCAAGCCGCCTGGTCAAGTCACTCTCACAGCCTCTTCTAGGTTTGCCTTaGCTTTTGCATTCTGTTTTC +
Preference number: 5 (lower is better)
Translates to: NSHQCPRPSRLVKSLSQPLLGLP*LLHSVF
Trigger: GAAAACAGAATGCAAAAGCAAAGGCAAACCTAGAAG...AGGCTGTGAGAGTGACTTGACCAGGCGGCTTGGCCGAGGACACTGGTGGCTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638825.1
CDS-3UTR CAA 90 bp TCGGACCAGAGCCCCATGATCAACTTTATGTGCTATGTGCAGGTTCTCATAAAACGCACTTGCGTGCCATaGCGAACGTTCTCGATCTCC +
Preference number: 5 (lower is better)
Translates to: SDQSPMINFMCYVQVLIKRTCVP*RTFSIS
Trigger: GGAGATCGAGAACGTTCGCAATGGCACGCAAGTGCG...TTTTATGAGAACCTGCACATAGCACATAAAGTTGATCATGGGGCTCTGGTCCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CAA 90 bp GGATTGATTATCTTTCAAGGATGCCTCTTCCATGCCAAGAACACGGATCTTGTGCGCACTTGCGTGCCATaGCGAACGTTCTCGATCTCC +
Preference number: 5 (lower is better)
Translates to: GLIIFQGCLFHAKNTDLVRTCVP*RTFSIS
Trigger: GGAGATCGAGAACGTTCGCAATGGCACGCAAGTGCG...CACAAGATCCGTGTTCTTGGCATGGAAGAGGCATCCTTGAAAGATAATCAATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675775.1
CDS-3UTR CAA 90 bp GCCCTCCTCAATCAGGGGAGAGGAGAGATCACTTTGCCTTTGGGACTTGACCTGACCTCCCCATTCAGTTaGGAATCTGCTCTGTTAATT +
Preference number: 5 (lower is better)
Translates to: ALLNQGRGEITLPLGLDLTSPFS*ESALLI
Trigger: AATTAACAGAGCAGATTCCAAACTGAATGGGGAGGT...CAGGTCAAGTCCCAAAGGCAAAGTGATCTCTCCTCTCCCCTGATTGAGGAGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000638825.1
ENST00000675775.1
CDS-3UTR CAA 90 bp TCGGACTCGTCCGGCAAACCTGCATGGCGTGAATTTACTCTGTCCGAGGGTGAGATGACAGGGCTTTCTTaGCAAAGATCCTTTCTCATT +
Preference number: 5 (lower is better)
Translates to: SDSSGKPAWREFTLSEGEMTGLS*QRSFLI
Trigger: AATGAGAAAGGATCTTTGCAAAGAAAGCCCTGTCAT...CTCACCCTCGGACAGAGTAAATTCACGCCATGCAGGTTTGCCGGACGAGTCCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265969.8
ENST00000638366.1
ENST00000640909.2
CDS-3UTR CAA 90 bp GGTCAAGTCACTCTCACAGCCTCTGTCGGCATATACTTAGCAATGACAGGGCTTGACCGACTGCCCTTTTaGGAAGCTTTCCTCTTGATC +
Preference number: 5 (lower is better)
Translates to: GQVTLTASVGIYLAMTGLDRLPF*EAFLLI
Trigger: GATCAAGAGGAAAGCTTCCAAAAAGGGCAGTCGGTC...AAGCCCTGTCATTGCTAAGTATATGCCGACAGAGGCTGTGAGAGTGACTTGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638825.1
CDS-3UTR CAA 90 bp ACTAAGAAAGCAGATCTCCCACCACTCAGCCCAGGCCCCTTTGCTTCAAATCGTGGTAAGTCTTGGGTATaGACTGAGTCAGCTTGCACT +
Preference number: 5 (lower is better)
Translates to: TKKADLPPLSPGPFASNRGKSWV*TESACT
Trigger: AGTGCAAGCTGACTCAGTCAATACCCAAGACTTACC...ACGATTTGAAGCAAAGGGGCCTGGGCTGAGTGGTGGGAGATCTGCTTTCTTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS-3UTR CAA 90 bp ATTTTGAGTAGCGTGATGAAATCTCATGCCATGTCACTCCATCCCACCCAGAACGCAAAGGGGTCTCTTTaGGCTGCCAAAAGGCTCCAG +
Preference number: 5 (lower is better)
Translates to: ILSSVMKSHAMSLHPTQNAKGSL*AAKRLQ
Trigger: CTGGAGCCTTTTGGCAGCCAAAAGAGACCCCTTTGC...GTTCTGGGTGGGATGGAGTGACATGGCATGAGATTTCATCACGCTACTCAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS-3UTR CAA 90 bp AGGATGCCTCTTCCATGCCAAGAACACGGATCTTGTGTAGCTAAGTTCACAGGGAGTAAAGAGACTGTCTaGTCTGCTCTTTGGGGCCAC +
Preference number: 5 (lower is better)
Translates to: RMPLPCQEHGSCVAKFTGSKETV*SALWGH
Trigger: GTGGCCCCAAAGAGCAGACAAGACAGTCTCTTTACT...CCCTGTGAACTTAGCTACACAAGATCCGTGTTCTTGGCATGGAAGAGGCATCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638825.1
CDS CCA 90 bp TTCTTCCTGGGCCAGCGGACATGTGTCACTCTGAGTACTGTGGTGTaGAGAGTTTACGACAGATTTACAATAATTGGGAGATCCCAGCTG +
Preference number: 5 (lower is better)
Translates to: FFLGQRTCVTLSTVV*RVYDRFTIIGRSQL
Trigger: CAGCTGGGATCTCCCAATTATTGTAAATCTGTCGTAAACTCTCCACACCACAGTACTCAGAGTGACACATGTCCGCTGGCCCAGGAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000265969.8
ENST00000379472.4
ENST00000638366.1
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
ENST00000640909.2
ENST00000675775.1
CDS-3UTR CAA 90 bp CATTCTAGAGAGAGCCTGCAAAGTACAGATGACCATGGTATACTTGGGAATGTTACGCGTACTCCCCGGTaGATAAGAGGAAGCAGGGTC +
Preference number: 5 (lower is better)
Translates to: HSRESLQSTDDHGILGNVTRTPR*IRGSRV
Trigger: GACCCTGCTTCCTCTTATCAACCGGGGAGTACGCGT...AACATTCCCAAGTATACCATGGTCATCTGTACTTTGCAGGCTCTCTCTAGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000639325.2
ENST00000640318.2
CDS-3UTR CAA 90 bp ACTAAGAAAGCAGATCTCCCACCACTCAGCCCAGGCCCCTTTGCTTCAAATCGTGAAGTTGACGTGATTTaGAGAGGGACACTAAGTCCA +
Preference number: 5 (lower is better)
Translates to: TKKADLPPLSPGPFASNREVDVI*RGTLSP
Trigger: TGGACTTAGTGTCCCTCTCAAAATCACGTCAACTTC...ACGATTTGAAGCAAAGGGGCCTGGGCTGAGTGGTGGGAGATCTGCTTTCTTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639495.1
CDS-3UTR CAA 90 bp ATTCAAGTCTTAGAAGGGGCAGTGATATGTTTCAGTTGTGAGCCAGCCAGAGGAGATTTCAGGCATCCCTaGGGGGTCTTGGAACATGTC +
Preference number: 5 (lower is better)
Translates to: IQVLEGAVICFSCEPARGDFRHP*GVLEHV
Trigger: GACATGTTCCAAGACCCCCAAGGGATGCCTGAAATC...TCCTCTGGCTGGCTCACAACTGAAACATATCACTGCCCCTTCTAAGACTTGAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000639495.1
CDS-3UTR CAA 90 bp GAGAACAGTAGTTCCCCTTATCTGCAGTTGCACTTTCTACAGTTTCTGTTACCTATCGGCACAAAGCTTTaGGGGGAAAGGTCAGCCGCT +
Preference number: 5 (lower is better)
Translates to: ENSSSPYLQLHFLQFLLPIGTKL*GERSAA
Trigger: AGCGGCTGACCTTTCCCCCAAAAGCTTTGTGCCGAT...AGGTAACAGAAACTGTAGAAAGTGCAACTGCAGATAAGGGGAACTACTGTTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000639325.2
ENST00000640318.2
CDS-3UTR CAA 90 bp ATTCAAGTCTTAGAAGGGGCAGTGATATGTTTCAGTTGTGAGCCAGCCAGAGGATTCTCGATCTCCGTCTaGTTCACGATGGGGTTGAAG +
Preference number: 5 (lower is better)
Translates to: IQVLEGAVICFSCEPARGFSISV*FTMGLK
Trigger: CTTCAACCCCATCGTGAACAAGACGGAGATCGAGAA...TCCTCTGGCTGGCTCACAACTGAAACATATCACTGCCCCTTCTAAGACTTGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000639325.2
ENST00000640318.2
CDS-3UTR CAA 90 bp CTGGCTTGTGGATTGATTATCTTTCAAGGATGCCTCTTCCATGCCAAGAACACGATGAACTCTACCTTGTaGGGGCAGAAGATGACACGC +
Preference number: 5 (lower is better)
Translates to: LACGLIIFQGCLFHAKNTMNSTL*GQKMTR
Trigger: GCGTGTCATCTTCTGCCCCAACAAGGTAGAGTTCAT...CGTGTTCTTGGCATGGAAGAGGCATCCTTGAAAGATAATCAATCCACAAGCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675775.1
CDS-3UTR CAA 90 bp GAAACTATGGCAGAGAGGGTAACTTGCTCAAGGAGGAGAACCTTGTCCTGGGTATTGATGAACTCTACCTaGTTGGGGCAGAAGATGACA +
Preference number: 5 (lower is better)
Translates to: ETMAERVTCSRRRTLSWVLMNST*LGQKMT
Trigger: TGTCATCTTCTGCCCCAACAAGGTAGAGTTCATCAA...TACCCAGGACAAGGTTCTCCTCCTTGAGCAAGTTACCCTCTCTGCCATAGTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000639325.2
ENST00000640318.2
CDS-3UTR CAA 90 bp ACTAAGAAAGCAGATCTCCCACCACTCAGCCCAGGCCCCTTTGCTTCAAATCGTATGTTGAGCGAGTTCTaGATGAACTCTACCTTGTTG +
Preference number: 5 (lower is better)
Translates to: TKKADLPPLSPGPFASNRMLSEF*MNSTLL
Trigger: CAACAAGGTAGAGTTCATCAAGAACTCGCTCAACAT...ACGATTTGAAGCAAAGGGGCCTGGGCTGAGTGGTGGGAGATCTGCTTTCTTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000639325.2
ENST00000640318.2
CDS-3UTR CAA 90 bp CCATACGTGGATACATGGGAAGGCTCTGTCTCCCTGAGGAAAAACCAGATGGAGATGTTGAGCGAGTTCTaGATGAACTCTACCTTGTTG +
Preference number: 5 (lower is better)
Translates to: PYVDTWEGSVSLRKNQMEMLSEF*MNSTLL
Trigger: CAACAAGGTAGAGTTCATCAAGAACTCGCTCAACAT...CTCCATCTGGTTTTTCCTCAGGGAGACAGAGCCTTCCCATGTATCCACGTATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000640909.2
CDS-3UTR CAA 90 bp CCAGAGCCCCATGATCAACTTTATGTGCTATGTGCAGGTTCTCATAAAACTGAGGTTGGGATGTCTATATaGCTGCTGCAGTCCCTACCG +
Preference number: 5 (lower is better)
Translates to: PEPHDQLYVLCAGSHKTEVGMSI*LLQSLP
Trigger: CGGTAGGGACTGCAGCAGCAATATAGACATCCCAAC...CTCAGTTTTATGAGAACCTGCACATAGCACATAAAGTTGATCATGGGGCTCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379472.4
CDS-3UTR CAA 90 bp ACTAAGAAAGCAGATCTCCCACCACTCAGCCCAGGCCCCTTTGCTTCAAATCGTGTGGTTTTCAGTATCTaGCATTACAGGACCACATCT +
Preference number: 5 (lower is better)
Translates to: TKKADLPPLSPGPFASNRVVFSI*HYRTTS
Trigger: AGATGTGGTCCTGTAATGCAAGATACTGAAAACCAC...ACGATTTGAAGCAAAGGGGCCTGGGCTGAGTGGTGGGAGATCTGCTTTCTTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS-3UTR CAA 90 bp CTGGCTTGTGGATTGATTATCTTTCAAGGATGCCTCTTCCATGCCAAGAACACGGAGATCACTTTGCCTTaGGGACTTGACCTGCCATCT +
Preference number: 5 (lower is better)
Translates to: LACGLIIFQGCLFHAKNTEITLP*GLDLPS
Trigger: AGATGGCAGGTCAAGTCCCAAAGGCAAAGTGATCTC...CGTGTTCTTGGCATGGAAGAGGCATCCTTGAAAGATAATCAATCCACAAGCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638825.1
ENST00000675775.1
CDS-3UTR CAA 90 bp ATGCAAAAGTTTCACATTTTGAGTAGCGTGATGAAATCTCATGCCATGTCACTCCGCACTTGCGTGCCATaGCGAACGTTCTCGATCTCC +
Preference number: 5 (lower is better)
Translates to: MQKFHILSSVMKSHAMSLRTCVP*RTFSIS
Trigger: GGAGATCGAGAACGTTCGCAATGGCACGCAAGTGCG...GAGTGACATGGCATGAGATTTCATCACGCTACTCAAAATGTGAAACTTTTGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000639325.2
ENST00000640318.2
CDS-3UTR CAA 90 bp ATCCTCTACGGTCAGTTACCATTTGGCCGTAGAAAAAGCTACGTCCGTCCTAGTTTGATGAACTCTACCTaGTTGGGGCAGAAGATGACA +
Preference number: 5 (lower is better)
Translates to: ILYGQLPFGRRKSYVRPSLMNST*LGQKMT
Trigger: TGTCATCTTCTGCCCCAACAAGGTAGAGTTCATCAA...ACTAGGACGGACGTAGCTTTTTCTACGGCCAAATGGTAACTGACCGTAGAGGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265969.8
CDS-3UTR CAA 90 bp GTGGGGATGTGGTTTTCAGTATCTTGCATTACAGGACCACATCTGTGCCCACACACCTCCCCATTCAGTTaGGAATCTGCTCTGTTAATT +
Preference number: 5 (lower is better)
Translates to: VGMWFSVSCITGPHLCPHTSPFS*ESALLI
Trigger: AATTAACAGAGCAGATTCCAAACTGAATGGGGAGGT...GTGTGGGCACAGATGTGGTCCTGTAATGCAAGATACTGAAAACCACATCCCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000639325.2
ENST00000640318.2
CDS-3UTR CAA 90 bp ATGCCAAACGGGGAAGAAGGCAGCCGTGCGAGTTTCCACAATTCTATTTGGAGCATGACAGGGCTTTCTTaGCAAAGATCCTTTCTCATT +
Preference number: 5 (lower is better)
Translates to: MPNGEEGSRASFHNSIWSMTGLS*QRSFLI
Trigger: AATGAGAAAGGATCTTTGCAAAGAAAGCCCTGTCAT...GCTCCAAATAGAATTGTGGAAACTCGCACGGCTGCCTTCTTCCCCGTTTGGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265969.8
CDS-3UTR CAA 90 bp AAGTTTCACATTTTGAGTAGCGTGATGAAATCTCATGCCATGTCACTCCATCCCGGCAGAGAGGGTAACTaGCTCAAGGAGGAGAACCTT +
Preference number: 5 (lower is better)
Translates to: KFHILSSVMKSHAMSLHPGREGN*LKEENL
Trigger: AAGGTTCTCCTCCTTGAGCAAGTTACCCTCTCTGCC...GGGATGGAGTGACATGGCATGAGATTTCATCACGCTACTCAAAATGTGAAACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS-3UTR CAA 90 bp AAGTTTCACATTTTGAGTAGCGTGATGAAATCTCATGCCATGTCACTCCATCCCATGAACTCTACCTTGTaGGGGCAGAAGATGACACGC +
Preference number: 5 (lower is better)
Translates to: KFHILSSVMKSHAMSLHPMNSTL*GQKMTR
Trigger: GCGTGTCATCTTCTGCCCCAACAAGGTAGAGTTCAT...GGGATGGAGTGACATGGCATGAGATTTCATCACGCTACTCAAAATGTGAAACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000639325.2
ENST00000640318.2
CDS-3UTR CAA 90 bp CAGAGGGAGAACAGTAGTTCCCCTTATCTGCAGTTGCACTTTCTACAGTTTCTGTTGATGAACTCTACCTaGTTGGGGCAGAAGATGACA +
Preference number: 5 (lower is better)
Translates to: QRENSSSPYLQLHFLQFLLMNST*LGQKMT
Trigger: TGTCATCTTCTGCCCCAACAAGGTAGAGTTCATCAA...CAGAAACTGTAGAAAGTGCAACTGCAGATAAGGGGAACTACTGTTCTCCCTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000639325.2
ENST00000640318.2
CDS-3UTR CAA 90 bp GGATGTGGTTTTCAGTATCTTGCATTACAGGACCACATCTGTGCCCACACTGCAACCTCCCCATTCAGTTaGGAATCTGCTCTGTTAATT +
Preference number: 5 (lower is better)
Translates to: GCGFQYLALQDHICAHTATSPFS*ESALLI
Trigger: AATTAACAGAGCAGATTCCAAACTGAATGGGGAGGT...TGCAGTGTGGGCACAGATGTGGTCCTGTAATGCAAGATACTGAAAACCACATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000639325.2
ENST00000640318.2
CDS-3UTR CAA 90 bp GGATGTGGTTTTCAGTATCTTGCATTACAGGACCACATCTGTGCCCACACTGCAGATTCCAAGAAGCTATaGCAAAGGTTGAGTCCTCAA +
Preference number: 5 (lower is better)
Translates to: GCGFQYLALQDHICAHTADSKKL*QRLSPQ
Trigger: TTGAGGACTCAACCTTTGCAATAGCTTCTTGGAATC...TGCAGTGTGGGCACAGATGTGGTCCTGTAATGCAAGATACTGAAAACCACATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS-3UTR CAA 90 bp AGTAGCGTGATGAAATCTCATGCCATGTCACTCCATCCCACCCAGAACATGAATTATAGCTCCACATCCTaGCCAGAACTTAGCATGATC +
Preference number: 5 (lower is better)
Translates to: SSVMKSHAMSLHPTQNMNYSSTS*PELSMI
Trigger: GATCATGCTAAGTTCTGGCAAGGATGTGGAGCTATA...ATTCATGTTCTGGGTGGGATGGAGTGACATGGCATGAGATTTCATCACGCTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639495.1
CDS-3UTR CAA 90 bp TCTAGAGAGAGCCTGCAAAGTACAGATGACCATGGTATACTTGGGAATGTTGGGTCCCCTTATCTGCAGTaGCACTTTCTACAGTTTCTG +
Preference number: 5 (lower is better)
Translates to: SRESLQSTDDHGILGNVGSPYLQ*HFLQFL
Trigger: CAGAAACTGTAGAAAGTGCAACTGCAGATAAGGGGA...CCCAACATTCCCAAGTATACCATGGTCATCTGTACTTTGCAGGCTCTCTCTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS-3UTR CAA 90 bp GATGACCATGGTATACTTGGGAATGTTGGGTTTATAGAATTAAAGTGGGTTGGTTCAAGGAGGAGAACCTaGTCCTGGGTACTCTGCAGC +
Preference number: 5 (lower is better)
Translates to: DDHGILGNVGFIELKWVGSRRRT*SWVLCS
Trigger: GCTGCAGAGTACCCAGGACAAGGTTCTCCTCCTTGA...ACCAACCCACTTTAATTCTATAAACCCAACATTCCCAAGTATACCATGGTCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS-3UTR CAA 90 bp TTATTCGAGATGCAGAAGTGTGTCTCTGCAAACCTCCGACTGCTTCAGGAAAACACCTCCCCATTCAGTTaGGAATCTGCTCTGTTAATT +
Preference number: 5 (lower is better)
Translates to: LFEMQKCVSANLRLLQENTSPFS*ESALLI
Trigger: AATTAACAGAGCAGATTCCAAACTGAATGGGGAGGT...GTTTTCCTGAAGCAGTCGGAGGTTTGCAGAGACACACTTCTGCATCTCGAATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265969.8
CDS-3UTR CAA 90 bp ATTTTGAGTAGCGTGATGAAATCTCATGCCATGTCACTCCATCCCACCCAGAACGATTCCAAGAAGCTATaGCAAAGGTTGAGTCCTCAA +
Preference number: 5 (lower is better)
Translates to: ILSSVMKSHAMSLHPTQNDSKKL*QRLSPQ
Trigger: TTGAGGACTCAACCTTTGCAATAGCTTCTTGGAATC...GTTCTGGGTGGGATGGAGTGACATGGCATGAGATTTCATCACGCTACTCAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS-3UTR CAA 90 bp ATTTTGAGTAGCGTGATGAAATCTCATGCCATGTCACTCCATCCCACCCAGAACGTGGTTTTCAGTATCTaGCATTACAGGACCACATCT +
Preference number: 5 (lower is better)
Translates to: ILSSVMKSHAMSLHPTQNVVFSI*HYRTTS
Trigger: AGATGTGGTCCTGTAATGCAAGATACTGAAAACCAC...GTTCTGGGTGGGATGGAGTGACATGGCATGAGATTTCATCACGCTACTCAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS-3UTR CAA 90 bp TCTCAGAGGGAGAACAGTAGTTCCCCTTATCTGCAGTTGCACTTTCTACAGTTTATGTTGAGCGAGTTCTaGATGAACTCTACCTTGTTG +
Preference number: 5 (lower is better)
Translates to: SQRENSSSPYLQLHFLQFMLSEF*MNSTLL
Trigger: CAACAAGGTAGAGTTCATCAAGAACTCGCTCAACAT...AAACTGTAGAAAGTGCAACTGCAGATAAGGGGAACTACTGTTCTCCCTCTGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000639325.2
ENST00000640318.2
CDS-3UTR CAA 90 bp GGATTGATTATCTTTCAAGGATGCCTCTTCCATGCCAAGAACACGGATCTTGTGATGTTGAGCGAGTTCTaGATGAACTCTACCTTGTTG +
Preference number: 5 (lower is better)
Translates to: GLIIFQGCLFHAKNTDLVMLSEF*MNSTLL
Trigger: CAACAAGGTAGAGTTCATCAAGAACTCGCTCAACAT...CACAAGATCCGTGTTCTTGGCATGGAAGAGGCATCCTTGAAAGATAATCAATCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675775.1
CDS-3UTR CAA 90 bp CAAAGGATGATGAATTCAGGATCTAAAGGGTGGAATATGAAAAGAAGTCAACAAGCAAAGGGGTCTCTTTaGGCTGCCAAAAGGCTCCAG +
Preference number: 5 (lower is better)
Translates to: QRMMNSGSKGWNMKRSQQAKGSL*AAKRLQ
Trigger: CTGGAGCCTTTTGGCAGCCAAAAGAGACCCCTTTGC...TTGTTGACTTCTTTTCATATTCCACCCTTTAGATCCTGAATTCATCATCCTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS-3UTR CAA 90 bp AAGAAGGCAGCCGTGCGAGTTTCCACAATTCTATTTGGAGCAAAGTTCTCAGTTTTGGAAGCTTTCCTCTaGATCTTGTGTACAAAAAGG +
Preference number: 5 (lower is better)
Translates to: KKAAVRVSTILFGAKFSVLEAFL*ILCTKR
Trigger: CCTTTTTGTACACAAGATCAAGAGGAAAGCTTCCAA...AACTGAGAACTTTGCTCCAAATAGAATTGTGGAAACTCGCACGGCTGCCTTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265969.8
ENST00000638825.1
CDS-3UTR CAA 90 bp AAGTTTCACATTTTGAGTAGCGTGATGAAATCTCATGCCATGTCACTCCATCCCGTGGTTTTCAGTATCTaGCATTACAGGACCACATCT +
Preference number: 5 (lower is better)
Translates to: KFHILSSVMKSHAMSLHPVVFSI*HYRTTS
Trigger: AGATGTGGTCCTGTAATGCAAGATACTGAAAACCAC...GGGATGGAGTGACATGGCATGAGATTTCATCACGCTACTCAAAATGTGAAACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS CCA 90 bp TTTGGAATCTGGCACTCCTTCTTACTCAGTGCTGTCATTCTTCTCTaGGTCATCTGTTCCTTTGAAATCCCTGCTCTGTTAATTTCTAAA +
Preference number: 5 (lower is better)
Translates to: FGIWHSFLLSAVILL*VICSFEIPALLISK
Trigger: TTTAGAAATTAACAGAGCAGGGATTTCAAAGGAACAGATGACCCAGAGAAGAATGACAGCACTGAGTAAGAAGGAGTGCCAGATTCCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638366.1
CDS-3UTR CAA 90 bp CAAAGGATGATGAATTCAGGATCTAAAGGGTGGAATATGAAAAGAAGTCAACAATTCTCGATCTCCGTCTaGTTCACGATGGGGTTGAAG +
Preference number: 5 (lower is better)
Translates to: QRMMNSGSKGWNMKRSQQFSISV*FTMGLK
Trigger: CTTCAACCCCATCGTGAACAAGACGGAGATCGAGAA...TTGTTGACTTCTTTTCATATTCCACCCTTTAGATCCTGAATTCATCATCCTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000639325.2
ENST00000640318.2
CDS-3UTR CAA 90 bp ATGCAAAAGTTTCACATTTTGAGTAGCGTGATGAAATCTCATGCCATGTCACTCTCCCCTTATCTGCAGTaGCACTTTCTACAGTTTCTG +
Preference number: 5 (lower is better)
Translates to: MQKFHILSSVMKSHAMSLSPYLQ*HFLQFL
Trigger: CAGAAACTGTAGAAAGTGCAACTGCAGATAAGGGGA...GAGTGACATGGCATGAGATTTCATCACGCTACTCAAAATGTGAAACTTTTGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS-3UTR CAA 90 bp CAAAGGATGATGAATTCAGGATCTAAAGGGTGGAATATGAAAAGAAGTCAACAATCCCCTTATCTGCAGTaGCACTTTCTACAGTTTCTG +
Preference number: 5 (lower is better)
Translates to: QRMMNSGSKGWNMKRSQQSPYLQ*HFLQFL
Trigger: CAGAAACTGTAGAAAGTGCAACTGCAGATAAGGGGA...TTGTTGACTTCTTTTCATATTCCACCCTTTAGATCCTGAATTCATCATCCTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
CDS GCA 72 bp CGGCGCGCTCTCGGCGCGGGGGAGATGGATGCCGCCTaGCTTCCTCCCTGCGTGGCCGGGCTGCAGCTCGGG +
Preference number: 6 (lower is better)
Translates to: RRALGAGEMDAA*LPPCVAGLQLG
Trigger: CCCGAGCTGCAGCCCGGCCACGCAGGGAGGAAGGCAGGCGGCATCCATCTCCCCCGCGCCGAGAGCGCGCCG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265969.8
ENST00000379472.4
ENST00000639325.2
ENST00000640318.2
ENST00000640909.2
ENST00000675775.1
CDS GCA 72 bp ATTTGCGGGGCCGGCGGGCACTGGCTCCGGTGCCTCTaGGCCCCGCACTCCGCTCCTCGCTTCGGGCAGGCG +
Preference number: 6 (lower is better)
Translates to: ICGAGGHWLRCL*APHSAPRFGQA
Trigger: CGCCTGCCCGAAGCGAGGAGCGGAGTGCGGGGCGCAGAGGCACCGGAGCCAGTGCCCGCCGGCCCCGCAAAT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265969.8
ENST00000379472.4
ENST00000639325.2
ENST00000640318.2
ENST00000640909.2
ENST00000675775.1
CDS CCA 72 bp GCTCTCCGTGAGCCCGGGCTCGAGCTGGGGTTCCGCTaGGCTGCGCTCGGACTTGGGCTCCCGCGGCGGTGC +
Preference number: 6 (lower is better)
Translates to: ALREPGLELGFR*AALGLGLPRRC
Trigger: GCACCGCCGCGGGAGCCCAAGTCCGAGCGCAGCCCAGCGGAACCCCAGCTCGAGCCCGGGCTCACGGAGAGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265969.8
ENST00000379472.4
ENST00000639325.2
ENST00000640318.2
ENST00000640909.2
ENST00000675775.1
CDS TCA 72 bp TGGGCTGCGCTCGGACTTGGGCTCCCGCGGCGGTGCTaGAGGGACAGCTCCCGGCGGTCGCGGAGCTGCACG +
Preference number: 6 (lower is better)
Translates to: WAALGLGLPRRC*RDSSRRSRSCT
Trigger: CGTGCAGCTCCGCGACCGCCGGGAGCTGTCCCTTCAGCACCGCCGCGGGAGCCCAAGTCCGAGCGCAGCCCA
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265969.8
ENST00000379472.4
ENST00000639325.2
ENST00000640318.2
ENST00000640909.2
ENST00000675775.1
CDS TCA 72 bp GGGAGGAGACAGGGCCGGGAAATTCGCGCTCCTCTGTaGGGTGGTCGCCGCGGCGCGCTCTCGGCGCGGGGG +
Preference number: 6 (lower is better)
Translates to: GRRQGREIRAPL*GGRRGALSARG
Trigger: CCCCCGCGCCGAGAGCGCGCCGCGGCGACCACCTCACAGAGGAGCGCGAATTTCCCGGCCCTGTCTCCTCCC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265969.8
ENST00000379472.4
ENST00000639325.2
ENST00000640318.2
ENST00000640909.2
ENST00000675775.1
CDS CCA 72 bp CGCCGAGCGCTGCTCTCCGTGAGCCCGGGCTCGAGCTaGGGTTCCGCTGGGCTGCGCTCGGACTTGGGCTCC +
Preference number: 6 (lower is better)
Translates to: RRALLSVSPGSS*GSAGLRSDLGS
Trigger: GGAGCCCAAGTCCGAGCGCAGCCCAGCGGAACCCCAGCTCGAGCCCGGGCTCACGGAGAGCAGCGCTCGGCG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265969.8
ENST00000379472.4
ENST00000639325.2
ENST00000640318.2
ENST00000640909.2
ENST00000675775.1
CDS CCA 72 bp GCTCGAGCTGGGGTTCCGCTGGGCTGCGCTCGGACTTaGGCTCCCGCGGCGGTGCTGAAGGGACAGCTCCCG +
Preference number: 6 (lower is better)
Translates to: ARAGVPLGCART*APAAVLKGQLP
Trigger: CGGGAGCTGTCCCTTCAGCACCGCCGCGGGAGCCCAAGTCCGAGCGCAGCCCAGCGGAACCCCAGCTCGAGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265969.8
ENST00000379472.4
ENST00000639325.2
ENST00000640318.2
ENST00000640909.2
ENST00000675775.1
CDS CAA 72 bp GGCTCGAGCTGGGGTTCCGCTGGGCTGCGCTCGGACTaGGGCTCCCGCGGCGGTGCTGAAGGGACAGCTCCC +
Preference number: 6 (lower is better)
Translates to: GSSWGSAGLRSD*GSRGGAEGTAP
Trigger: GGGAGCTGTCCCTTCAGCACCGCCGCGGGAGCCCAAGTCCGAGCGCAGCCCAGCGGAACCCCAGCTCGAGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265969.8
ENST00000379472.4
ENST00000639325.2
ENST00000640318.2
ENST00000640909.2
ENST00000675775.1
CDS CAA 90 bp AAGCCGCCAGGCCGGCCATCCGGGGAGTCACTGAGCGCCAGGCGCTaGGTCATCTCCAGCTCGTCCTCGCCGTCGCCCGAGTCGCCAGGG +
Preference number: 6 (lower is better)
Translates to: KPPGRPSGESLSARR*VISSSSSPSPESPG
Trigger: CCCTGGCGACTCGGGCGACGGCGAGGACGAGCTGGAGATGACCAAGCGCCTGGCGCTCAGTGACTCCCCGGATGGCCGGCCTGGCGGCTT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265969.8
ENST00000379472.4
ENST00000639325.2
ENST00000640318.2
ENST00000640909.2
ENST00000675775.1
CDS TCA 72 bp GTTGCTCGTGCGGCTAACGCCGAGCGCTGCTCTCCGTaGGCCCGGGCTCGAGCTGGGGTTCCGCTGGGCTGC +
Preference number: 6 (lower is better)
Translates to: VARAANAERCSP*ARARAGVPLGC
Trigger: GCAGCCCAGCGGAACCCCAGCTCGAGCCCGGGCTCACGGAGAGCAGCGCTCGGCGTTAGCCGCACGAGCAAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265969.8
ENST00000379472.4
ENST00000639325.2
ENST00000640318.2
ENST00000640909.2
ENST00000675775.1
CDS CAA 72 bp GGCCGGCCATCCGGGGAGTCACTGAGCGCCAGGCGCTaGGTCATCTCCAGCTCGTCCTCGCCGTCGCCCGAG +
Preference number: 6 (lower is better)
Translates to: GRPSGESLSARR*VISSSSSPSPE
Trigger: CTCGGGCGACGGCGAGGACGAGCTGGAGATGACCAAGCGCCTGGCGCTCAGTGACTCCCCGGATGGCCGGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265969.8
ENST00000379472.4
ENST00000639325.2
ENST00000640318.2
ENST00000640909.2
ENST00000675775.1
CDS GCA 72 bp ACGAGCGAGCCAAGCCTCTCCGGGCGCTTTGTCGGGTaGCGGTCCAGGGGAATGTGCGCGGGATCCCAGGGG +
Preference number: 6 (lower is better)
Translates to: TSEPSLSGRFVG*RSRGMCAGSQG
Trigger: CCCCTGGGATCCCGCGCACATTCCCCTGGACCGGCACCCGACAAAGCGCCCGGAGAGGCTTGGCTCGCTCGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265969.8
ENST00000379472.4
ENST00000639325.2
ENST00000640318.2
ENST00000640909.2
ENST00000675775.1
CDS CAA 72 bp GCCCACGTTGATCACGATGCGCTCGCTCTCGTCCCCTaGGCCCATCGCGGCGCCCCCTTAGGCATGGCGCGG +
Preference number: 6 (lower is better)
Translates to: AHVDHDALALVP*AHRGAPLGMAR
Trigger: CCGCGCCATGCCTAAGGGGGCGCCGCGATGGGCCAAGGGGACGAGAGCGAGCGCATCGTGATCAACGTGGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265969.8
ENST00000379472.4
ENST00000639325.2
ENST00000640318.2
ENST00000640909.2
ENST00000675775.1
CDS CAA 72 bp CCACCCCAACGAGCGAGCCAAGCCTCTCCGGGCGCTTaGTCGGGTGCCGGTCCAGGGGAATGTGCGCGGGAT +
Preference number: 6 (lower is better)
Translates to: PPQRASQASPGA*SGAGPGECARD
Trigger: ATCCCGCGCACATTCCCCTGGACCGGCACCCGACAAAGCGCCCGGAGAGGCTTGGCTCGCTCGTTGGGGTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265969.8
ENST00000379472.4
ENST00000639325.2
ENST00000640318.2
ENST00000640909.2
ENST00000675775.1
CDS TCA 72 bp GCCAAAAGCCGCCAGGCCGGCCATCCGGGGAGTCACTaGGCGCCAGGCGCTTGGTCATCTCCAGCTCGTCCT +
Preference number: 6 (lower is better)
Translates to: AKSRQAGHPGSH*APGAWSSPARP
Trigger: AGGACGAGCTGGAGATGACCAAGCGCCTGGCGCTCAGTGACTCCCCGGATGGCCGGCCTGGCGGCTTTTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265969.8
ENST00000379472.4
ENST00000639325.2
ENST00000640318.2
ENST00000640909.2
ENST00000675775.1
CDS GCA 72 bp TCCGGGCGCTTTGTCGGGTGCCGGTCCAGGGGAATGTaGGCGGGATCCCAGGGGTCTCTAGGAGCCAGATGT +
Preference number: 6 (lower is better)
Translates to: SGRFVGCRSRGM*AGSQGSLGARC
Trigger: ACATCTGGCTCCTAGAGACCCCTGGGATCCCGCGCACATTCCCCTGGACCGGCACCCGACAAAGCGCCCGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265969.8
ENST00000379472.4
ENST00000639325.2
ENST00000640318.2
ENST00000640909.2
ENST00000675775.1
CDS CCA 72 bp TTGAGCGTCCCTGAGGACGGAAAAGCGGGCAGGCTGTaGAGCGAGGAGGGCACAAGGCAGGGGGCTTGGTGG +
Preference number: 6 (lower is better)
Translates to: LSVPEDGKAGRL*SEEGTRQGAWW
Trigger: CCACCAAGCCCCCTGCCTTGTGCCCTCCTCGCTCCACAGCCTGCCCGCTTTTCCGTCCTCAGGGACGCTCAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526029.1
CDS CAA 72 bp GGACAGGCCAGAAGCGGGGTATTGGCAGAGGGCAGCTaGAGCGTCCCTGAGGACGGAAAAGCGGGCAGGCTG +
Preference number: 6 (lower is better)
Translates to: GQARSGVLAEGS*SVPEDGKAGRL
Trigger: CAGCCTGCCCGCTTTTCCGTCCTCAGGGACGCTCAAGCTGCCCTCTGCCAATACCCCGCTTCTGGCCTGTCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526029.1
CDS TCA 72 bp GACAGGCCAGAAGCGGGGTATTGGCAGAGGGCAGCTTaGGCGTCCCTGAGGACGGAAAAGCGGGCAGGCTGT +
Preference number: 6 (lower is better)
Translates to: DRPEAGYWQRAA*ASLRTEKRAGC
Trigger: ACAGCCTGCCCGCTTTTCCGTCCTCAGGGACGCTCAAGCTGCCCTCTGCCAATACCCCGCTTCTGGCCTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526029.1
CDS GCA 72 bp CCACCCATCTGCAGGAGCGCGAGGCGGCCCGGACGATaGACGGTGCTCCAGCTTCCTCTACATACCCTTTCT +
Preference number: 6 (lower is better)
Translates to: PPICRSARRPGR*TVLQLPLHTLS
Trigger: AGAAAGGGTATGTAGAGGAAGCTGGAGCACCGTGCATCGTCCGGGCCGCCTCGCGCTCCTGCAGATGGGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638825.1
ENST00000675775.1
CDS CAA 90 bp GACCCTTTCTCATTCCTCCACCAGGTGGGCACGCGTACTCCCCGGTaGATAAGAGGAAGCAGGGTCCGTATCTCTCGCGGGTGCCCGAGC +
Preference number: 6 (lower is better)
Translates to: DPFSFLHQVGTRTPR*IRGSRVRISRGCPS
Trigger: GCTCGGGCACCCGCGAGAGATACGGACCCTGCTTCCTCTTATCAACCGGGGAGTACGCGTGCCCACCTGGTGGAGGAATGAGAAAGGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000639325.2
ENST00000640318.2
CDS CAA 90 bp TACCCTTTCTCATTCCTCCACCAGGTGGGCACGCGTACTCCCCGGTaGATAAGAGGAAGCAGGGTCCGTATCTCTCGCGGGTGCCCGAGC +
Preference number: 6 (lower is better)
Translates to: YPFSFLHQVGTRTPR*IRGSRVRISRGCPS
Trigger: GCTCGGGCACCCGCGAGAGATACGGACCCTGCTTCCTCTTATCAACCGGGGAGTACGCGTGCCCACCTGGTGGAGGAATGAGAAAGGGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525802.1
ENST00000638825.1
ENST00000675775.1
CDS GCA 72 bp TCTGCAGGAGCGCGAGGCGGCCCGGACGATGCACGGTaGTCCAGCTTCCTCTACATACCCTTTCTCATTCCT +
Preference number: 6 (lower is better)
Translates to: SAGARGGPDDAR*SSFLYIPFLIP
Trigger: AGGAATGAGAAAGGGTATGTAGAGGAAGCTGGAGCACCGTGCATCGTCCGGGCCGCCTCGCGCTCCTGCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638825.1
ENST00000675775.1
CDS CAA 72 bp GAAGGCCTCCGTCTCGGCCTCCCGGTAGTAGCGCACTaGCGTGCCATTGCGAACGTTCTCGATCTCCGTCTT +
Preference number: 6 (lower is better)
Translates to: EGLRLGLPVVAH*RAIANVLDLRL
Trigger: AAGACGGAGATCGAGAACGTTCGCAATGGCACGCAAGTGCGCTACTACCGGGAGGCCGAGACGGAGGCCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000265969.8
ENST00000379472.4
ENST00000639325.2
ENST00000640153.1
ENST00000640318.2
ENST00000640909.2
ENST00000675775.1
CDS GCA 72 bp CCTCCGTCTCGGCCTCCCGGTAGTAGCGCACTTGCGTaGCATTGCGAACGTTCTCGATCTCCGTCTTGTTCA +
Preference number: 6 (lower is better)
Translates to: PPSRPPGSSALA*HCERSRSPSCS
Trigger: TGAACAAGACGGAGATCGAGAACGTTCGCAATGGCACGCAAGTGCGCTACTACCGGGAGGCCGAGACGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000265969.8
ENST00000379472.4
ENST00000639325.2
ENST00000640153.1
ENST00000640318.2
ENST00000640909.2
ENST00000675775.1
CDS CAA 90 bp GTAGGTAAGGAAGGCCTCCGTCTCGGCCTCCCGGTAGTAGCGCACTaGCGTGCCATTGCGAACGTTCTCGATCTCCGTCTTGTTCACGAT +
Preference number: 6 (lower is better)
Translates to: VGKEGLRLGLPVVAH*RAIANVLDLRLVHD
Trigger: ATCGTGAACAAGACGGAGATCGAGAACGTTCGCAATGGCACGCAAGTGCGCTACTACCGGGAGGCCGAGACGGAGGCCTTCCTTACCTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000265969.8
ENST00000379472.4
ENST00000639325.2
ENST00000640153.1
ENST00000640318.2
ENST00000640909.2
ENST00000675775.1
CDS GCA 72 bp TCTCGGCCTCCCGGTAGTAGCGCACTTGCGTGCCATTaGGAACGTTCTCGATCTCCGTCTTGTTCACGATGG +
Preference number: 6 (lower is better)
Translates to: SRPPGSSALACH*ERSRSPSCSRW
Trigger: CCATCGTGAACAAGACGGAGATCGAGAACGTTCGCAATGGCACGCAAGTGCGCTACTACCGGGAGGCCGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000265969.8
ENST00000379472.4
ENST00000639325.2
ENST00000640153.1
ENST00000640318.2
ENST00000640909.2
ENST00000675775.1
CDS CAA 72 bp ACTTGCGTGCCATTGCGAACGTTCTCGATCTCCGTCTaGTTCACGATGGGGTTGAAGCGCTCGTGGGTCTCC +
Preference number: 6 (lower is better)
Translates to: TCVPLRTFSISV*FTMGLKRSWVS
Trigger: GGAGACCCACGAGCGCTTCAACCCCATCGTGAACAAGACGGAGATCGAGAACGTTCGCAATGGCACGCAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265969.8
ENST00000379472.4
ENST00000639325.2
ENST00000640153.1
ENST00000640318.2
ENST00000640909.2
ENST00000675775.1
CDS GCA 72 bp ACATACTGTCAGACTTTATCTCCCTTCTACACGCCATaGCTGCAGCAGCTGAGTCCCACCACACCCAGGATC +
Preference number: 6 (lower is better)
Translates to: TYCQTLSPFYTP*LQQLSPTTPRI
Trigger: GATCCTGGGTGTGGTGGGACTCAGCTGCTGCAGGCATGGCGTGTAGAAGGGAGATAAAGTCTGACAGTATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640153.1
CDS CAA 72 bp GTGCTGGGAGTGGGGACTCCTGGGTTTGCTCAAAGTTaGCAAAAAGATGAGTTGGTGATGGATCCAGCAGGT +
Preference number: 6 (lower is better)
Translates to: VLGVGTPGFAQS*QKDELVMDPAG
Trigger: ACCTGCTGGATCCATCACCAACTCATCTTTTTGCAAACTTTGAGCAAACCCAGGAGTCCCCACTCCCAGCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526029.1
CDS CCA 72 bp TGTGGTGTGGAGAGTTTACGACAGATTTACAATAATTaGGAGATCCCAGCTGCGGTGGCCGCGGAATATGCT +
Preference number: 6 (lower is better)
Translates to: CGVESLRQIYNN*EIPAAVAAEYA
Trigger: AGCATATTCCGCGGCCACCGCAGCTGGGATCTCCCAATTATTGTAAATCTGTCGTAAACTCTCCACACCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000265969.8
ENST00000379472.4
ENST00000638366.1
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
ENST00000640909.2
ENST00000675775.1
CDS CCA 72 bp GGCCAGCGGACATGTGTCACTCTGAGTACTGTGGTGTaGAGAGTTTACGACAGATTTACAATAATTGGGAGA +
Preference number: 6 (lower is better)
Translates to: GQRTCVTLSTVV*RVYDRFTIIGR
Trigger: TCTCCCAATTATTGTAAATCTGTCGTAAACTCTCCACACCACAGTACTCAGAGTGACACATGTCCGCTGGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000265969.8
ENST00000379472.4
ENST00000638366.1
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
ENST00000640909.2
ENST00000675775.1
CDS TCA 72 bp AAAATTTCTTCCTGGGCCAGCGGACATGTGTCACTCTaGGTACTGTGGTGTGGAGAGTTTACGACAGATTTA +
Preference number: 6 (lower is better)
Translates to: KISSWASGHVSL*VLWCGEFTTDL
Trigger: TAAATCTGTCGTAAACTCTCCACACCACAGTACTCAGAGTGACACATGTCCGCTGGCCCAGGAAGAAATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000265969.8
ENST00000379472.4
ENST00000638366.1
ENST00000639325.2
ENST00000639495.1
ENST00000640318.2
ENST00000640909.2
ENST00000675775.1
CDS CAA 72 bp GAAGCAGTAAATGCAGATTTCTATAGCTCCACATCCTaGCCAGAACTTAGCATGATCCAGTTATCAATTTTT +
Preference number: 6 (lower is better)
Translates to: EAVNADFYSSTS*PELSMIQLSIF
Trigger: AAAAATTGATAACTGGATCATGCTAAGTTCTGGCAAGGATGTGGAGCTATAGAAATCTGCATTTACTGCTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639495.1