RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KCNAB3 (Homo sapiens)

Ensembl gene IDs: ENSG00000170049

Ensembl transcript IDs: ENST00000303790.2, ENST00000303790.3, ENST00000570587.5, ENST00000570852.1, ENST00000572275.1, ENST00000574006.5

Found 259 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GAGGAGCGGGGCTCGGGCGGGTGCAGCGACACCGGGTTGGGTCCCTaGGCCCGCGACAGACTACTTCTTGGAATGCGGCTTGTTTCCCAG +
Preference number: 1 (lower is better)
Translates to: EERGSGGCSDTGLGP*ARDRLLLGMRLVSQ
Trigger: CTGGGAAACAAGCCGCATTCCAAGAAGTAGTCTGTCGCGGGCGCAGGGACCCAACCCGGTGTCGCTGCACCCGCCCGAGCCCCGCTCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570587.5
3UTR CCA 90 bp TGGCTTTGTTCATGCGTATCACTACTCGAAGCCGGGACTCGTTGGTaGGCGGGGCTAGTCTGGCTCCGGCCGCTGCGTGGAGGGATCCGG +
Preference number: 1 (lower is better)
Translates to: WLCSCVSLLEAGTRW*AGLVWLRPLRGGIR
Trigger: CCGGATCCCTCCACGCAGCGGCCGGAGCCAGACTAGCCCCGCCCACCAACGAGTCCCGGCTTCGAGTAGTGATACGCATGAACAAAGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303790.2
3UTR GCA 90 bp GTCAGCTGGCTCAGCACCTGTAGCGCGCCCAGGTGTTCTATCAACTaGTCCGCACTCGACACCCCCAGCAAGACAGAGCTGACACCCTCA +
Preference number: 1 (lower is better)
Translates to: VSWLSTCSAPRCSIN*SALDTPSKTELTPS
Trigger: TGAGGGTGTCAGCTCTGTCTTGCTGGGGGTGTCGAGTGCGGAGCAGTTGATAGAACACCTGGGCGCGCTACAGGTGCTGAGCCAGCTGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570587.5
3UTR CCA 90 bp ATATGGCTTTGTTCATGCGTATCACTACTCGAAGCCGGGACTCGTTaGTGGGCGGGGCTAGTCTGGCTCCGGCCGCTGCGTGGAGGGATC +
Preference number: 1 (lower is better)
Translates to: IWLCSCVSLLEAGTR*WAGLVWLRPLRGGI
Trigger: GATCCCTCCACGCAGCGGCCGGAGCCAGACTAGCCCCGCCCACCAACGAGTCCCGGCTTCGAGTAGTGATACGCATGAACAAAGCCATAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303790.2
3UTR CCA 90 bp CAGCGACACCGGGTTGGGTCCCTGCGCCCGCGACAGACTACTTCTTaGAATGCGGCTTGTTTCCCAGGAGCCCGTCTATTTCCATCACTG +
Preference number: 1 (lower is better)
Translates to: QRHRVGSLRPRQTTS*NAACFPGARLFPSL
Trigger: CAGTGATGGAAATAGACGGGCTCCTGGGAAACAAGCCGCATTCCAAGAAGTAGTCTGTCGCGGGCGCAGGGACCCAACCCGGTGTCGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570587.5
3UTR GCA 90 bp AGCGTAGATGTGCTATTACATTTCCCTCTACCTTTGTCAGTGCTGTaGCACTGTAGACCCCACCCTGACCGCCCTCCTCCACCTCTGGGC +
Preference number: 1 (lower is better)
Translates to: SVDVLLHFPLPLSVL*HCRPHPDRPPPPLG
Trigger: GCCCAGAGGTGGAGGAGGGCGGTCAGGGTGGGGTCTACAGTGGCACAGCACTGACAAAGGTAGAGGGAAATGTAATAGCACATCTACGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303790.2
3UTR GCA 90 bp AATCAAGGCGTCCCTGCCCGTGACGGAAAGGCTGTCACTAATTCCTaGCAAGAACAGCCCAACTGTTTTCCAAGGACCACCCCGGCCACT +
Preference number: 1 (lower is better)
Translates to: NQGVPARDGKAVTNS*QEQPNCFPRTTPAT
Trigger: AGTGGCCGGGGTGGTCCTTGGAAAACAGTTGGGCTGTTCTTGGCAGGAATTAGTGACAGCCTTTCCGTCACGGGCAGGGACGCCTTGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303790.2
3UTR GCA 90 bp CTAGGCCAAGACAGGATACCCGAAGACCAGACTTCCCTAGGTTCCTaGAAGATACAGAAGCAGCGGGAAGGGGTGGAGCCTCCATTATGG +
Preference number: 1 (lower is better)
Translates to: LGQDRIPEDQTSLGS*KIQKQREGVEPPLW
Trigger: CCATAATGGAGGCTCCACCCCTTCCCGCTGCTTCTGTATCTTGCAGGAACCTAGGGAAGTCTGGTCTTCGGGTATCCTGTCTTGGCCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570587.5
ENST00000570852.1
3UTR CCA 90 bp GGGCGGGCGTGCTACTTTCTCTCTCGACCCCACTGCAAAAGGATATaGCTTTGTTCATGCGTATCACTACTCGAAGCCGGGACTCGTTGG +
Preference number: 1 (lower is better)
Translates to: GRACYFLSRPHCKRI*LCSCVSLLEAGTRW
Trigger: CCAACGAGTCCCGGCTTCGAGTAGTGATACGCATGAACAAAGCCATATCCTTTTGCAGTGGGGTCGAGAGAGAAAGTAGCACGCCCGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303790.2
3UTR TCA 90 bp GCAGTGAGGGGCTGGGAGGAATTTTGTTTGATTGTGGTGAGTTTGTaGGACCAGGCCCTCAGGCAGAGTGCTGTGCCAAATGGTAGATGG +
Preference number: 1 (lower is better)
Translates to: AVRGWEEFCLIVVSL*DQALRQSAVPNGRW
Trigger: CCATCTACCATTTGGCACAGCACTCTGCCTGAGGGCCTGGTCTCACAAACTCACCACAATCAAACAAAATTCCTCCCAGCCCCTCACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000570587.5
ENST00000570852.1
3UTR GCA 90 bp CTGGGAGGCAGGGTCCTGGTTTCCCAAAGATTATCATTTACTTCCTaGCAGGACCAGCCTGGCTTCCTTCGTACCGAATACGCTAAGAGC +
Preference number: 1 (lower is better)
Translates to: LGGRVLVSQRLSFTS*QDQPGFLRTEYAKS
Trigger: GCTCTTAGCGTATTCGGTACGAAGGAAGCCAGGCTGGTCCTGGCAGGAAGTAAATGATAATCTTTGGGAAACCAGGACCCTGCCTCCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303790.2
3UTR TCA 90 bp TCCTCTGGAGCCACTGTCCAGAGTCTCCATTCCCTCTTATCACATTaGAGACGTGCAGTCTGGTTTGTCCTTCTTCTGGGGTCTTGTCTG +
Preference number: 1 (lower is better)
Translates to: SSGATVQSLHSLLSH*RRAVWFVLLLGSCL
Trigger: CAGACAAGACCCCAGAAGAAGGACAAACCAGACTGCACGTCTTCAATGTGATAAGAGGGAATGGAGACTCTGGACAGTGGCTCCAGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570587.5
ENST00000570852.1
3UTR GCA 90 bp AGCCCAACTGTTTTCCAAGGACCACCCCGGCCACTTTCACCAGACTaGAGCGTAGATGTGCTATTACATTTCCCTCTACCTTTGTCAGTG +
Preference number: 1 (lower is better)
Translates to: SPTVFQGPPRPLSPD*SVDVLLHFPLPLSV
Trigger: CACTGACAAAGGTAGAGGGAAATGTAATAGCACATCTACGCTGCAGTCTGGTGAAAGTGGCCGGGGTGGTCCTTGGAAAACAGTTGGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303790.2
3UTR GCA 90 bp TATTGCTTTAGGTTTATTGCCAGGAGGAAGACTGCAGTTCCCCACTaGCAGGTAGGAGGCCCTGCTCAAGGCTCAAAAGTCTATACCCAG +
Preference number: 1 (lower is better)
Translates to: YCFRFIARRKTAVPH*QVGGPAQGSKVYTQ
Trigger: CTGGGTATAGACTTTTGAGCCTTGAGCAGGGCCTCCTACCTGGCAGTGGGGAACTGCAGTCTTCCTCCTGGCAATAAACCTAAAGCAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303790.2
3UTR GCA 90 bp AGCCACTGTCCAGAGTCTCCATTCCCTCTTATCACATTGAAGACGTaGAGTCTGGTTTGTCCTTCTTCTGGGGTCTTGTCTGTGTTTGAG +
Preference number: 1 (lower is better)
Translates to: SHCPESPFPLITLKT*SLVCPSSGVLSVFE
Trigger: CTCAAACACAGACAAGACCCCAGAAGAAGGACAAACCAGACTGCACGTCTTCAATGTGATAAGAGGGAATGGAGACTCTGGACAGTGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570587.5
ENST00000570852.1
3UTR TCA 90 bp GCAGAGGTCCTAGGAATTTTCTCAAAAGGACAAGTGAACCATATGTaGCTGTTCCTCTGGAGCCACTGTCCAGAGTCTCCATTCCCTCTT +
Preference number: 1 (lower is better)
Translates to: AEVLGIFSKGQVNHM*LFLWSHCPESPFPL
Trigger: AAGAGGGAATGGAGACTCTGGACAGTGGCTCCAGAGGAACAGTCACATATGGTTCACTTGTCCTTTTGAGAAAATTCCTAGGACCTCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000570587.5
ENST00000570852.1
3UTR TCA 90 bp TTGATGAGAACAGTGACTAGGAGCCCGATGCCTGGGTCACCAAGGTaGATGAGCAATGGAGAGAAAGCTAATGCTAGCAGATTTCTAATG +
Preference number: 1 (lower is better)
Translates to: LMRTVTRSPMPGSPR*MSNGEKANASRFLM
Trigger: CATTAGAAATCTGCTAGCATTAGCTTTCTCTCCATTGCTCATTCACCTTGGTGACCCAGGCATCGGGCTCCTAGTCACTGTTCTCATCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303790.2
3UTR GCA 90 bp TTTACAGTTACCTGGGAAGTCTTACAGAGAAGGGGCCATCATTATTaGTTTAGGTTTATTGCCAGGAGGAAGACTGCAGTTCCCCACTGC +
Preference number: 1 (lower is better)
Translates to: FTVTWEVLQRRGHHY*FRFIARRKTAVPHC
Trigger: GCAGTGGGGAACTGCAGTCTTCCTCCTGGCAATAAACCTAAAGCAATAATGATGGCCCCTTCTCTGTAAGACTTCCCAGGTAACTGTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303790.2
3UTR GCA 90 bp CAGTCCAAAGAAATTAGACCCAGTGGGCCTATAAGATTGGGCAAGTaGTATCTCCAGAGCAGAGGTCCTAGGAATTTTCTCAAAAGGACA +
Preference number: 1 (lower is better)
Translates to: QSKEIRPSGPIRLGK*YLQSRGPRNFLKRT
Trigger: TGTCCTTTTGAGAAAATTCCTAGGACCTCTGCTCTGGAGATAGCACTTGCCCAATCTTATAGGCCCACTGGGTCTAATTTCTTTGGACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000570587.5
ENST00000570852.1
3UTR-3UTR GCA 90 bp ATGCCCGGGATTTGCAAGAAGGGCCTAGAAAGACGCAGCAGGGGGCGGGCGTGCTCTGGCTCCGGCCGCTaGGTGGAGGGATCCGGAGCG +
Preference number: 2 (lower is better)
Translates to: MPGICKKGLERRSRGRACSGSGR*VEGSGA
Trigger: CGCTCCGGATCCCTCCACGCAGCGGCCGGAGCCAGA...GCACGCCCGCCCCCTGCTGCGTCTTTCTAGGCCCTTCTTGCAAATCCCGGGCAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000303790.2
3UTR-3UTR GCA 90 bp CGTATCACTACTCGAAGCCGGGACTCGTTGGTGGGCGGGGCTAGTCTGGCTCCGTCTGGCTCCGGCCGCTaGGTGGAGGGATCCGGAGCG +
Preference number: 2 (lower is better)
Translates to: RITTRSRDSLVGGASLAPSGSGR*VEGSGA
Trigger: CGCTCCGGATCCCTCCACGCAGCGGCCGGAGCCAGA...CGGAGCCAGACTAGCCCCGCCCACCAACGAGTCCCGGCTTCGAGTAGTGATACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303790.2
ENST00000570587.5
3UTR-3UTR CCA 90 bp AGTGGCAGAGAGCCGACGGCGAGTAGCTCATGCCCGGGATTTGCAAGAAGGGCCGCCGGGACTCGTTGGTaGGCGGGGCTAGTCTGGCTC +
Preference number: 2 (lower is better)
Translates to: SGREPTASSSCPGFARRAAGTRW*AGLVWL
Trigger: GAGCCAGACTAGCCCCGCCCACCAACGAGTCCCGGC...GGCCCTTCTTGCAAATCCCGGGCATGAGCTACTCGCCGTCGGCTCTCTGCCACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303790.2
3UTR-3UTR GCA 90 bp CAAGGCGTCCCTGCCCGTGACGGAAAGGCTGTCACTAATTCCTGCCAAGAACAGCGGGGCTCGGGCGGGTaGAGCGACACCGGGTTGGGT +
Preference number: 2 (lower is better)
Translates to: QGVPARDGKAVTNSCQEQRGSGG*SDTGLG
Trigger: ACCCAACCCGGTGTCGCTGCACCCGCCCGAGCCCCG...CTGTTCTTGGCAGGAATTAGTGACAGCCTTTCCGTCACGGGCAGGGACGCCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303790.2
3UTR CAA 90 bp GACGAAGTGGCAGAGAGCCGACGGCGAGTAGCTCATGCCCGGGATTaGCAAGAAGGGCCTAGAAAGACGCAGCAGGGGGCGGGCGTGCTA +
Preference number: 2 (lower is better)
Translates to: DEVAESRRRVAHARD*QEGPRKTQQGAGVL
Trigger: TAGCACGCCCGCCCCCTGCTGCGTCTTTCTAGGCCCTTCTTGCAAATCCCGGGCATGAGCTACTCGCCGTCGGCTCTCTGCCACTTCGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000303790.2
3UTR-3UTR CCA 90 bp CAAGGCGTCCCTGCCCGTGACGGAAAGGCTGTCACTAATTCCTGCCAAGAACAGGCAGCGACACCGGGTTaGGTCCCTGCGCCCGCGACA +
Preference number: 2 (lower is better)
Translates to: QGVPARDGKAVTNSCQEQAATPG*VPAPAT
Trigger: TGTCGCGGGCGCAGGGACCCAACCCGGTGTCGCTGC...CTGTTCTTGGCAGGAATTAGTGACAGCCTTTCCGTCACGGGCAGGGACGCCTTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303790.2
3UTR-3UTR GCA 90 bp GAACCAAATGTGACCCAGGTACCTAGGCCAAGACAGGATACCCGAAGACCAGACCGGGGCTCGGGCGGGTaGAGCGACACCGGGTTGGGT +
Preference number: 2 (lower is better)
Translates to: EPNVTQVPRPRQDTRRPDRGSGG*SDTGLG
Trigger: ACCCAACCCGGTGTCGCTGCACCCGCCCGAGCCCCG...GTCTGGTCTTCGGGTATCCTGTCTTGGCCTAGGTACCTGGGTCACATTTGGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570587.5
3UTR-3UTR CCA 90 bp CTGGTGTCTTGGTCCTTGATGAGAACAGTGACTAGGAGCCCGATGCCTGGGTCATGGGCGGGGCTAGTCTaGCTCCGGCCGCTGCGTGGA +
Preference number: 2 (lower is better)
Translates to: LVSWSLMRTVTRSPMPGSWAGLV*LRPLRG
Trigger: TCCACGCAGCGGCCGGAGCCAGACTAGCCCCGCCCA...TGACCCAGGCATCGGGCTCCTAGTCACTGTTCTCATCAAGGACCAAGACACCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303790.2
3UTR-3UTR CCA 90 bp CCAGTTACTCGAGACGCTGAGGTAGGAGAATCCCTTGAACCCGGGAGGAGGAGGGAAGCCGGGACTCGTTaGTGGGCGGGGCTAGTCTGG +
Preference number: 2 (lower is better)
Translates to: PVTRDAEVGESLEPGRRREAGTR*WAGLVW
Trigger: CCAGACTAGCCCCGCCCACCAACGAGTCCCGGCTTC...CCTCCTCCTCCCGGGTTCAAGGGATTCTCCTACCTCAGCGTCTCGAGTAACTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570587.5
3UTR CAA 90 bp GATATGGCTTTGTTCATGCGTATCACTACTCGAAGCCGGGACTCGTaGGTGGGCGGGGCTAGTCTGGCTCCGGCCGCTGCGTGGAGGGAT +
Preference number: 2 (lower is better)
Translates to: DMALFMRITTRSRDS*VGGASLAPAAAWRD
Trigger: ATCCCTCCACGCAGCGGCCGGAGCCAGACTAGCCCCGCCCACCAACGAGTCCCGGCTTCGAGTAGTGATACGCATGAACAAAGCCATATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303790.2
3UTR-3UTR TCA 90 bp CGTATCACTACTCGAAGCCGGGACTCGTTGGTGGGCGGGGCTAGTCTGGCTCCGTCCACCTTCTCCCTCTaGAACAGATGGTGCTCCGCT +
Preference number: 2 (lower is better)
Translates to: RITTRSRDSLVGGASLAPSTFSL*NRWCSA
Trigger: AGCGGAGCACCATCTGTTTCAGAGGGAGAAGGTGGA...CGGAGCCAGACTAGCCCCGCCCACCAACGAGTCCCGGCTTCGAGTAGTGATACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570587.5
3UTR CAA 90 bp GGTTGGGTCCCTGCGCCCGCGACAGACTACTTCTTGGAATGCGGCTaGTTTCCCAGGAGCCCGTCTATTTCCATCACTGTCTGCGGGGTC +
Preference number: 2 (lower is better)
Translates to: GWVPAPATDYFLECG*FPRSPSISITVCGV
Trigger: GACCCCGCAGACAGTGATGGAAATAGACGGGCTCCTGGGAAACAAGCCGCATTCCAAGAAGTAGTCTGTCGCGGGCGCAGGGACCCAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570587.5
3UTR-3UTR GCA 90 bp CGTATCACTACTCGAAGCCGGGACTCGTTGGTGGGCGGGGCTAGTCTGGCTCCGCTCTACCTTTGTCAGTaGTGTGCCACTGTAGACCCC +
Preference number: 2 (lower is better)
Translates to: RITTRSRDSLVGGASLAPLYLCQ*CATVDP
Trigger: GGGGTCTACAGTGGCACAGCACTGACAAAGGTAGAG...CGGAGCCAGACTAGCCCCGCCCACCAACGAGTCCCGGCTTCGAGTAGTGATACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303790.2
3UTR-3UTR CCA 90 bp CATCTGTGGGTTGTGTGCAGTGAGGGGCTGGGAGGAATTTTGTTTGATTGTGGTGCAGCGACACCGGGTTaGGTCCCTGCGCCCGCGACA +
Preference number: 2 (lower is better)
Translates to: HLWVVCSEGLGGILFDCGAATPG*VPAPAT
Trigger: TGTCGCGGGCGCAGGGACCCAACCCGGTGTCGCTGC...ACCACAATCAAACAAAATTCCTCCCAGCCCCTCACTGCACACAACCCACAGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570587.5
3UTR-3UTR CCA 90 bp GAAATTAGACCCAGTGGGCCTATAAGATTGGGCAAGTGCTATCTCCAGAGCAGATGGGCGGGGCTAGTCTaGCTCCGGCCGCTGCGTGGA +
Preference number: 2 (lower is better)
Translates to: EIRPSGPIRLGKCYLQSRWAGLV*LRPLRG
Trigger: TCCACGCAGCGGCCGGAGCCAGACTAGCCCCGCCCA...TCTGCTCTGGAGATAGCACTTGCCCAATCTTATAGGCCCACTGGGTCTAATTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570587.5
3UTR CAA 90 bp GGCGTGCTACTTTCTCTCTCGACCCCACTGCAAAAGGATATGGCTTaGTTCATGCGTATCACTACTCGAAGCCGGGACTCGTTGGTGGGC +
Preference number: 2 (lower is better)
Translates to: GVLLSLSTPLQKDMA*FMRITTRSRDSLVG
Trigger: GCCCACCAACGAGTCCCGGCTTCGAGTAGTGATACGCATGAACAAAGCCATATCCTTTTGCAGTGGGGTCGAGAGAGAAAGTAGCACGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303790.2
3UTR CAA 90 bp TCACCAGACTGCAGCGTAGATGTGCTATTACATTTCCCTCTACCTTaGTCAGTGCTGTGCCACTGTAGACCCCACCCTGACCGCCCTCCT +
Preference number: 2 (lower is better)
Translates to: SPDCSVDVLLHFPLP*SVLCHCRPHPDRPP
Trigger: AGGAGGGCGGTCAGGGTGGGGTCTACAGTGGCACAGCACTGACAAAGGTAGAGGGAAATGTAATAGCACATCTACGCTGCAGTCTGGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303790.2
3UTR-3UTR TCA 90 bp TCCCTCTACCTTTGTCAGTGCTGTGCCACTGTAGACCCCACCCTGACCGCCCTCTTCAAGGGCCCCTTTTaGGGTACACTGTATGTTTCT +
Preference number: 2 (lower is better)
Translates to: SLYLCQCCATVDPTLTALFKGPF*GTLYVS
Trigger: AGAAACATACAGTGTACCTCAAAAGGGGCCCTTGAA...GAGGGCGGTCAGGGTGGGGTCTACAGTGGCACAGCACTGACAAAGGTAGAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000303790.2
3UTR-3UTR TCA 90 bp GAACCAAATGTGACCCAGGTACCTAGGCCAAGACAGGATACCCGAAGACCAGACATTGTGGTGAGTTTGTaGGACCAGGCCCTCAGGCAG +
Preference number: 2 (lower is better)
Translates to: EPNVTQVPRPRQDTRRPDIVVSL*DQALRQ
Trigger: CTGCCTGAGGGCCTGGTCTCACAAACTCACCACAAT...GTCTGGTCTTCGGGTATCCTGTCTTGGCCTAGGTACCTGGGTCACATTTGGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570587.5
ENST00000570852.1
3UTR-3UTR GCA 90 bp TACAGAAGCAGCGGGAAGGGGTGGAGCCTCCATTATGGACTTAGATTATCAGCCCATCTGTGGGTTGTGTaGAGTGAGGGGCTGGGAGGA +
Preference number: 2 (lower is better)
Translates to: YRSSGKGWSLHYGLRLSAHLWVV*SEGLGG
Trigger: TCCTCCCAGCCCCTCACTGCACACAACCCACAGATG...GGCTGATAATCTAAGTCCATAATGGAGGCTCCACCCCTTCCCGCTGCTTCTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000570587.5
ENST00000570852.1
3UTR-3UTR TCA 90 bp TATGGACTTAGATTATCAGCCCCCAGCTCCTCTCCTTCCAGACTGAGAAGCCCTGTGGGTTGTGTGCAGTaGGGGGCTGGGAGGAATTTT +
Preference number: 2 (lower is better)
Translates to: YGLRLSAPSSSPSRLRSPVGCVQ*GAGRNF
Trigger: AAAATTCCTCCCAGCCCCTCACTGCACACAACCCAC...AGGGCTTCTCAGTCTGGAAGGAGAGGAGCTGGGGGCTGATAATCTAAGTCCATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000570587.5
ENST00000570852.1
3UTR-3UTR GCA 90 bp CAAGGCGTCCCTGCCCGTGACGGAAAGGCTGTCACTAATTCCTGCCAAGAACAGCTCTCTCGACCCCACTaGAAAAGGATATGGCTTTGT +
Preference number: 2 (lower is better)
Translates to: QGVPARDGKAVTNSCQEQLSRPH*KRIWLC
Trigger: ACAAAGCCATATCCTTTTGCAGTGGGGTCGAGAGAG...CTGTTCTTGGCAGGAATTAGTGACAGCCTTTCCGTCACGGGCAGGGACGCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303790.2
3UTR-3UTR GCA 90 bp GAACCAAATGTGACCCAGGTACCTAGGCCAAGACAGGATACCCGAAGACCAGACTCAGGCAGAGTGCTGTaGCAAATGGTAGATGGCAGG +
Preference number: 2 (lower is better)
Translates to: EPNVTQVPRPRQDTRRPDSGRVL*QMVDGR
Trigger: CCTGCCATCTACCATTTGGCACAGCACTCTGCCTGA...GTCTGGTCTTCGGGTATCCTGTCTTGGCCTAGGTACCTGGGTCACATTTGGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570587.5
ENST00000570852.1
3UTR CAA 90 bp ACCAGGCCCTCAGGCAGAGTGCTGTGCCAAATGGTAGATGGCAGGTaGGAAGAGGTAAACCAAGTCAAGTTCAGGCATTCAGACAGACAG +
Preference number: 2 (lower is better)
Translates to: TRPSGRVLCQMVDGR*EEVNQVKFRHSDRQ
Trigger: CTGTCTGTCTGAATGCCTGAACTTGACTTGGTTTACCTCTTCCAACCTGCCATCTACCATTTGGCACAGCACTCTGCCTGAGGGCCTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570587.5
ENST00000570852.1
3UTR CAA 90 bp TTGAGTCATCTGTGGGTTGTGTGCAGTGAGGGGCTGGGAGGAATTTaGTTTGATTGTGGTGAGTTTGTGAGACCAGGCCCTCAGGCAGAG +
Preference number: 2 (lower is better)
Translates to: LSHLWVVCSEGLGGI*FDCGEFVRPGPQAE
Trigger: CTCTGCCTGAGGGCCTGGTCTCACAAACTCACCACAATCAAACAAAATTCCTCCCAGCCCCTCACTGCACACAACCCACAGATGACTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570587.5
ENST00000570852.1
3UTR CAA 90 bp CCCTTGATGGAGGCCCTGCAAGTATCTGGGACTCGCCCATCATACTaGCTAGTAATGAGACCACAGGCTAGAGGGTACCAAGTGACTGAT +
Preference number: 2 (lower is better)
Translates to: PLMEALQVSGTRPSY*LVMRPQARGYQVTD
Trigger: ATCAGTCACTTGGTACCCTCTAGCCTGTGGTCTCATTACTAGCAAGTATGATGGGCGAGTCCCAGATACTTGCAGGGCCTCCATCAAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570587.5
3UTR-3UTR TCA 90 bp GACAGTTGGGGTCTGAGCGATTGGCAAAGACAATGTCCACGTATCCCAGCTGGACACTCCAGCCCTCAATaGTGTGCTTTCGGCTTAAAC +
Preference number: 2 (lower is better)
Translates to: DSWGLSDWQRQCPRIPAGHSSPQ*CAFGLN
Trigger: GTTTAAGCCGAAAGCACATCATTGAGGGCTGGAGTG...TCCAGCTGGGATACGTGGACATTGTCTTTGCCAATCGCTCAGACCCCAACTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570587.5
3UTR-3UTR GCA 90 bp GAAGTCTTACAGAGAAGGGGCCATCATTATTGCTTTAGGTTTATTGCCAGGAGGAGCAGGGGGCGGGCGTaGTACTTTCTCTCTCGACCC +
Preference number: 2 (lower is better)
Translates to: EVLQRRGHHYCFRFIARRSRGRA*YFLSRP
Trigger: GGGTCGAGAGAGAAAGTAGCACGCCCGCCCCCTGCT...CCTCCTGGCAATAAACCTAAAGCAATAATGATGGCCCCTTCTCTGTAAGACTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303790.2
3UTR-3UTR GCA 90 bp AGCCTCCATTATGGACTTAGATTATCAGCCCCCAGCTCCTCTCCTTCCAGACTGTCAGGCAGAGTGCTGTaGCAAATGGTAGATGGCAGG +
Preference number: 2 (lower is better)
Translates to: SLHYGLRLSAPSSSPSRLSGRVL*QMVDGR
Trigger: CCTGCCATCTACCATTTGGCACAGCACTCTGCCTGA...CAGTCTGGAAGGAGAGGAGCTGGGGGCTGATAATCTAAGTCCATAATGGAGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000570587.5
ENST00000570852.1
3UTR-3UTR GCA 90 bp ACTACTTCTTGGAATGCGGCTTGTTTCCCAGGAGCCCGTCTATTTCCATCACTGTTCAGCCTTTCCTGCTaGGTACACTTCGGCGGTGTC +
Preference number: 2 (lower is better)
Translates to: TTSWNAACFPGARLFPSLFSLSC*VHFGGV
Trigger: GACACCGCCGAAGTGTACGCAGCAGGAAAGGCTGAA...CAGTGATGGAAATAGACGGGCTCCTGGGAAACAAGCCGCATTCCAAGAAGTAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570587.5
3UTR-3UTR CCA 90 bp GCGACAGACTACTTCTTGGAATGCGGCTTGTTTCCCAGGAGCCCGTCTATTTCCTGTTTGAGTCATCTGTaGGTTGTGTGCAGTGAGGGG +
Preference number: 2 (lower is better)
Translates to: ATDYFLECGLFPRSPSISCLSHL*VVCSEG
Trigger: CCCCTCACTGCACACAACCCACAGATGACTCAAACA...GGAAATAGACGGGCTCCTGGGAAACAAGCCGCATTCCAAGAAGTAGTCTGTCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570587.5
3UTR-3UTR TCA 90 bp CTGTCCAGAGTCTCCATTCCCTCTTATCACATTGAAGACGTGCAGTCTGGTTTGATTGTGGTGAGTTTGTaGGACCAGGCCCTCAGGCAG +
Preference number: 2 (lower is better)
Translates to: LSRVSIPSYHIEDVQSGLIVVSL*DQALRQ
Trigger: CTGCCTGAGGGCCTGGTCTCACAAACTCACCACAAT...CAAACCAGACTGCACGTCTTCAATGTGATAAGAGGGAATGGAGACTCTGGACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570587.5
ENST00000570852.1
3UTR-3UTR TCA 90 bp GACAGTTGGGGTCTGAGCGATTGGCAAAGACAATGTCCACGTATCCCAGCTGGAGTCTCATCTGAGATCTaGGAACCAAATGTGACCCAG +
Preference number: 2 (lower is better)
Translates to: DSWGLSDWQRQCPRIPAGVSSEI*EPNVTQ
Trigger: CTGGGTCACATTTGGTTCTCAGATCTCAGATGAGAC...TCCAGCTGGGATACGTGGACATTGTCTTTGCCAATCGCTCAGACCCCAACTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570587.5
3UTR-3UTR TCA 90 bp GCGACAGACTACTTCTTGGAATGCGGCTTGTTTCCCAGGAGCCCGTCTATTTCCGGAAGTGCTCAGTTTTaGAGGACTGTAAGGTTTGGG +
Preference number: 2 (lower is better)
Translates to: ATDYFLECGLFPRSPSISGSAQF*RTVRFG
Trigger: CCCAAACCTTACAGTCCTTCAAAACTGAGCACTTCC...GGAAATAGACGGGCTCCTGGGAAACAAGCCGCATTCCAAGAAGTAGTCTGTCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570587.5
3UTR CAA 90 bp TTCCTCTGGAGCCACTGTCCAGAGTCTCCATTCCCTCTTATCACATaGAAGACGTGCAGTCTGGTTTGTCCTTCTTCTGGGGTCTTGTCT +
Preference number: 2 (lower is better)
Translates to: FLWSHCPESPFPLIT*KTCSLVCPSSGVLS
Trigger: AGACAAGACCCCAGAAGAAGGACAAACCAGACTGCACGTCTTCAATGTGATAAGAGGGAATGGAGACTCTGGACAGTGGCTCCAGAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570587.5
ENST00000570852.1
3UTR-3UTR TCA 90 bp GAAATTAGACCCAGTGGGCCTATAAGATTGGGCAAGTGCTATCTCCAGAGCAGAGGACTTAGTGAAGTTTaGAGGGGTCTTGGCGGCCAT +
Preference number: 2 (lower is better)
Translates to: EIRPSGPIRLGKCYLQSRGLSEV*RGLGGH
Trigger: ATGGCCGCCAAGACCCCTTCAAACTTCACTAAGTCC...TCTGCTCTGGAGATAGCACTTGCCCAATCTTATAGGCCCACTGGGTCTAATTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570852.1
3UTR-3UTR GCA 90 bp GACTACTTCTTGGAATGCGGCTTGTTTCCCAGGAGCCCGTCTATTTCCATCACTCAGCCCTCAATGATGTaGTTTCGGCTTAAACCTCGC +
Preference number: 2 (lower is better)
Translates to: DYFLECGLFPRSPSISITQPSMM*FRLKPR
Trigger: GCGAGGTTTAAGCCGAAAGCACATCATTGAGGGCTG...AGTGATGGAAATAGACGGGCTCCTGGGAAACAAGCCGCATTCCAAGAAGTAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570587.5
3UTR-3UTR TCA 90 bp ACAGAAGCAGCGGGAAGGGGTGGAGCCTCCATTATGGACTTAGATTATCAGCCCTCTCAAAAGGACAAGTaGACCATATGTGACTGTTCC +
Preference number: 2 (lower is better)
Translates to: TEAAGRGGASIMDLDYQPSQKDK*TICDCS
Trigger: GGAACAGTCACATATGGTTCACTTGTCCTTTTGAGA...GGGCTGATAATCTAAGTCCATAATGGAGGCTCCACCCCTTCCCGCTGCTTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000570587.5
ENST00000570852.1
3UTR-3UTR TCA 90 bp AATGTGACCCAGGTACCTAGGCCAAGACAGGATACCCGAAGACCAGACTTCCCTTCTCAAAAGGACAAGTaGACCATATGTGACTGTTCC +
Preference number: 2 (lower is better)
Translates to: NVTQVPRPRQDTRRPDFPSQKDK*TICDCS
Trigger: GGAACAGTCACATATGGTTCACTTGTCCTTTTGAGA...AGGGAAGTCTGGTCTTCGGGTATCCTGTCTTGGCCTAGGTACCTGGGTCACATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570587.5
ENST00000570852.1
3UTR-3UTR CCA 90 bp GAAATTAGACCCAGTGGGCCTATAAGATTGGGCAAGTGCTATCTCCAGAGCAGATGTTTGAGTCATCTGTaGGTTGTGTGCAGTGAGGGG +
Preference number: 2 (lower is better)
Translates to: EIRPSGPIRLGKCYLQSRCLSHL*VVCSEG
Trigger: CCCCTCACTGCACACAACCCACAGATGACTCAAACA...TCTGCTCTGGAGATAGCACTTGCCCAATCTTATAGGCCCACTGGGTCTAATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570587.5
ENST00000570852.1
3UTR CAA 90 bp CAGGTGTCTCAGTCCAAAGAAATTAGACCCAGTGGGCCTATAAGATaGGGCAAGTGCTATCTCCAGAGCAGAGGTCCTAGGAATTTTCTC +
Preference number: 2 (lower is better)
Translates to: QVSQSKEIRPSGPIR*GKCYLQSRGPRNFL
Trigger: GAGAAAATTCCTAGGACCTCTGCTCTGGAGATAGCACTTGCCCAATCTTATAGGCCCACTGGGTCTAATTTCTTTGGACTGAGACACCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570587.5
ENST00000570852.1
3UTR-3UTR CCA 90 bp ACTACTTCTTGGAATGCGGCTTGTTTCCCAGGAGCCCGTCTATTTCCATCACTGGTGCCAAATGGTAGATaGCAGGTTGGAAGAGGTAAA +
Preference number: 2 (lower is better)
Translates to: TTSWNAACFPGARLFPSLVPNGR*QVGRGK
Trigger: TTTACCTCTTCCAACCTGCCATCTACCATTTGGCAC...CAGTGATGGAAATAGACGGGCTCCTGGGAAACAAGCCGCATTCCAAGAAGTAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570587.5
3UTR-3UTR CCA 90 bp CCACTGTCCAGAGTCTCCATTCCCTCTTATCACATTGAAGACGTGCAGTCTGGTTGTGCAGTGAGGGGCTaGGAGGAATTTTGTTTGATT +
Preference number: 2 (lower is better)
Translates to: PLSRVSIPSYHIEDVQSGCAVRG*EEFCLI
Trigger: AATCAAACAAAATTCCTCCCAGCCCCTCACTGCACA...ACCAGACTGCACGTCTTCAATGTGATAAGAGGGAATGGAGACTCTGGACAGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000570587.5
ENST00000570852.1
3UTR-3UTR CCA 90 bp GCAAGATACAGAAGCAGCGGGAAGGGGTGGAGCCTCCATTATGGACTTAGATTATGTGCAGTGAGGGGCTaGGAGGAATTTTGTTTGATT +
Preference number: 2 (lower is better)
Translates to: ARYRSSGKGWSLHYGLRLCAVRG*EEFCLI
Trigger: AATCAAACAAAATTCCTCCCAGCCCCTCACTGCACA...TAATCTAAGTCCATAATGGAGGCTCCACCCCTTCCCGCTGCTTCTGTATCTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000570587.5
ENST00000570852.1
3UTR-3UTR GCA 90 bp TTTAGACACTGTGAGGATCAAGCTGAGGTTTATTTACAGTTACCTGGGAAGTCTACGGCGAGTAGCTCATaGCCGGGATTTGCAAGAAGG +
Preference number: 2 (lower is better)
Translates to: FRHCEDQAEVYLQLPGKSTASSS*PGFARR
Trigger: CCTTCTTGCAAATCCCGGGCATGAGCTACTCGCCGT...AGACTTCCCAGGTAACTGTAAATAAACCTCAGCTTGATCCTCACAGTGTCTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303790.2
3UTR-3UTR GCA 90 bp GTTACCTGGGAAGTCTTACAGAGAAGGGGCCATCATTATTGCTTTAGGTTTATTCCAGGTAGGAGGCCCTaGTCAAGGCTCAAAAGTCTA +
Preference number: 2 (lower is better)
Translates to: VTWEVLQRRGHHYCFRFIPGRRP*SRLKSL
Trigger: TAGACTTTTGAGCCTTGAGCAGGGCCTCCTACCTGG...AATAAACCTAAAGCAATAATGATGGCCCCTTCTCTGTAAGACTTCCCAGGTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303790.2
3UTR-3UTR GCA 90 bp GAAGTCTTACAGAGAAGGGGCCATCATTATTGCTTTAGGTTTATTGCCAGGAGGATATGGCTTTGTTCATaGGTATCACTACTCGAAGCC +
Preference number: 2 (lower is better)
Translates to: EVLQRRGHHYCFRFIARRIWLCS*VSLLEA
Trigger: GGCTTCGAGTAGTGATACGCATGAACAAAGCCATAT...CCTCCTGGCAATAAACCTAAAGCAATAATGATGGCCCCTTCTCTGTAAGACTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303790.2
3UTR-3UTR CCA 90 bp GTTACCTGGGAAGTCTTACAGAGAAGGGGCCATCATTATTGCTTTAGGTTTATTTGGGAGGCAGGGTCCTaGTTTCCCAAAGATTATCAT +
Preference number: 2 (lower is better)
Translates to: VTWEVLQRRGHHYCFRFIWEAGS*FPKDYH
Trigger: ATGATAATCTTTGGGAAACCAGGACCCTGCCTCCCA...AATAAACCTAAAGCAATAATGATGGCCCCTTCTCTGTAAGACTTCCCAGGTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303790.2
3UTR-3UTR CCA 90 bp ATAAGATTGGGCAAGTGCTATCTCCAGAGCAGAGGTCCTAGGAATTTTCTCAAAGTGCCAAATGGTAGATaGCAGGTTGGAAGAGGTAAA +
Preference number: 2 (lower is better)
Translates to: IRLGKCYLQSRGPRNFLKVPNGR*QVGRGK
Trigger: TTTACCTCTTCCAACCTGCCATCTACCATTTGGCAC...TTTGAGAAAATTCCTAGGACCTCTGCTCTGGAGATAGCACTTGCCCAATCTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570587.5
ENST00000570852.1
3UTR-3UTR TCA 90 bp ACTGTGAGGATCAAGCTGAGGTTTATTTACAGTTACCTGGGAAGTCTTACAGAGTTCCTATGTTCCAGATaGCATCACAACTCACTCACT +
Preference number: 2 (lower is better)
Translates to: TVRIKLRFIYSYLGSLTEFLCSR*HHNSLT
Trigger: AGTGAGTGAGTTGTGATGTCATCTGGAACATAGGAA...CTCTGTAAGACTTCCCAGGTAACTGTAAATAAACCTCAGCTTGATCCTCACAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303790.2
3UTR CAA 90 bp TATGTTCCAGATGACATCACAACTCACTCACTAGGTTATTACCCTTaGATGACATTTCAAGGGCCCCTTTTGAGGTACACTGTATGTTTC +
Preference number: 2 (lower is better)
Translates to: YVPDDITTHSLGYYP*MTFQGPLLRYTVCF
Trigger: GAAACATACAGTGTACCTCAAAAGGGGCCCTTGAAATGTCATCAAAGGGTAATAACCTAGTGAGTGAGTTGTGATGTCATCTGGAACATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303790.2
3UTR CAA 90 bp CACTCACTAGGTTATTACCCTTTGATGACATTTCAAGGGCCCCTTTaGAGGTACACTGTATGTTTCTTGTATGTGCTGGGTTTTTGTTTT +
Preference number: 2 (lower is better)
Translates to: HSLGYYPLMTFQGPL*RYTVCFLYVLGFCF
Trigger: AAAACAAAAACCCAGCACATACAAGAAACATACAGTGTACCTCAAAAGGGGCCCTTGAAATGTCATCAAAGGGTAATAACCTAGTGAGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303790.2
3UTR CCA 72 bp CTCGAAGCCGGGACTCGTTGGTGGGCGGGGCTAGTCTaGCTCCGGCCGCTGCGTGGAGGGATCCGGAGCGGG +
Preference number: 3 (lower is better)
Translates to: LEAGTRWWAGLV*LRPLRGGIRSG
Trigger: CCCGCTCCGGATCCCTCCACGCAGCGGCCGGAGCCAGACTAGCCCCGCCCACCAACGAGTCCCGGCTTCGAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303790.2
ENST00000570587.5
3UTR CCA 72 bp AGGAGCGGGGCTCGGGCGGGTGCAGCGACACCGGGTTaGGTCCCTGCGCCCGCGACAGACTACTTCTTGGAA +
Preference number: 3 (lower is better)
Translates to: RSGARAGAATPG*VPAPATDYFLE
Trigger: TTCCAAGAAGTAGTCTGTCGCGGGCGCAGGGACCCAACCCGGTGTCGCTGCACCCGCCCGAGCCCCGCTCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570587.5
3UTR GCA 72 bp GGCTCGGGCGGGTGCAGCGACACCGGGTTGGGTCCCTaGGCCCGCGACAGACTACTTCTTGGAATGCGGCTT +
Preference number: 3 (lower is better)
Translates to: GSGGCSDTGLGP*ARDRLLLGMRL
Trigger: AAGCCGCATTCCAAGAAGTAGTCTGTCGCGGGCGCAGGGACCCAACCCGGTGTCGCTGCACCCGCCCGAGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570587.5
3UTR CCA 72 bp TCATGCGTATCACTACTCGAAGCCGGGACTCGTTGGTaGGCGGGGCTAGTCTGGCTCCGGCCGCTGCGTGGA +
Preference number: 3 (lower is better)
Translates to: SCVSLLEAGTRW*AGLVWLRPLRG
Trigger: TCCACGCAGCGGCCGGAGCCAGACTAGCCCCGCCCACCAACGAGTCCCGGCTTCGAGTAGTGATACGCATGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303790.2
ENST00000570587.5
3UTR CCA 72 bp TGTTCATGCGTATCACTACTCGAAGCCGGGACTCGTTaGTGGGCGGGGCTAGTCTGGCTCCGGCCGCTGCGT +
Preference number: 3 (lower is better)
Translates to: CSCVSLLEAGTR*WAGLVWLRPLR
Trigger: ACGCAGCGGCCGGAGCCAGACTAGCCCCGCCCACCAACGAGTCCCGGCTTCGAGTAGTGATACGCATGAACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303790.2
ENST00000570587.5
3UTR-3UTR CAA 90 bp CTGGTGTCTTGGTCCTTGATGAGAACAGTGACTAGGAGCCCGATGCCTGGGTCATGCAGCGACACCGGGTaGGGTCCCTGCGCCCGCGAC +
Preference number: 3 (lower is better)
Translates to: LVSWSLMRTVTRSPMPGSCSDTG*GPCARD
Trigger: GTCGCGGGCGCAGGGACCCAACCCGGTGTCGCTGCA...TGACCCAGGCATCGGGCTCCTAGTCACTGTTCTCATCAAGGACCAAGACACCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303790.2
3UTR-3UTR CAA 90 bp GCGACAGACTACTTCTTGGAATGCGGCTTGTTTCCCAGGAGCCCGTCTATTTCCTGCAGCGACACCGGGTaGGGTCCCTGCGCCCGCGAC +
Preference number: 3 (lower is better)
Translates to: ATDYFLECGLFPRSPSISCSDTG*GPCARD
Trigger: GTCGCGGGCGCAGGGACCCAACCCGGTGTCGCTGCA...GGAAATAGACGGGCTCCTGGGAAACAAGCCGCATTCCAAGAAGTAGTCTGTCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570587.5
3UTR GCA 72 bp CTCAGCACCTGTAGCGCGCCCAGGTGTTCTATCAACTaGTCCGCACTCGACACCCCCAGCAAGACAGAGCTG +
Preference number: 3 (lower is better)
Translates to: LSTCSAPRCSIN*SALDTPSKTEL
Trigger: CAGCTCTGTCTTGCTGGGGGTGTCGAGTGCGGAGCAGTTGATAGAACACCTGGGCGCGCTACAGGTGCTGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570587.5
3UTR-3UTR CAA 90 bp CGTATCACTACTCGAAGCCGGGACTCGTTGGTGGGCGGGGCTAGTCTGGCTCCGGCGACAGACTACTTCTaGGAATGCGGCTTGTTTCCC +
Preference number: 3 (lower is better)
Translates to: RITTRSRDSLVGGASLAPATDYF*ECGLFP
Trigger: GGGAAACAAGCCGCATTCCAAGAAGTAGTCTGTCGC...CGGAGCCAGACTAGCCCCGCCCACCAACGAGTCCCGGCTTCGAGTAGTGATACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570587.5
3UTR-3UTR CAA 90 bp AGCCTCCATTATGGACTTAGATTATCAGCCCCCAGCTCCTCTCCTTCCAGACTGCGAAGCCGGGACTCGTaGGTGGGCGGGGCTAGTCTG +
Preference number: 3 (lower is better)
Translates to: SLHYGLRLSAPSSSPSRLRSRDS*VGGASL
Trigger: CAGACTAGCCCCGCCCACCAACGAGTCCCGGCTTCG...CAGTCTGGAAGGAGAGGAGCTGGGGGCTGATAATCTAAGTCCATAATGGAGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570587.5
3UTR GCA 72 bp GACAGGATACCCGAAGACCAGACTTCCCTAGGTTCCTaGAAGATACAGAAGCAGCGGGAAGGGGTGGAGCCT +
Preference number: 3 (lower is better)
Translates to: DRIPEDQTSLGS*KIQKQREGVEP
Trigger: AGGCTCCACCCCTTCCCGCTGCTTCTGTATCTTGCAGGAACCTAGGGAAGTCTGGTCTTCGGGTATCCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570587.5
ENST00000570852.1
3UTR GCA 72 bp GTGCTATTACATTTCCCTCTACCTTTGTCAGTGCTGTaGCACTGTAGACCCCACCCTGACCGCCCTCCTCCA +
Preference number: 3 (lower is better)
Translates to: VLLHFPLPLSVL*HCRPHPDRPPP
Trigger: TGGAGGAGGGCGGTCAGGGTGGGGTCTACAGTGGCACAGCACTGACAAAGGTAGAGGGAAATGTAATAGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303790.2
3UTR CCA 72 bp CCACTGGTAGCCCTTGATGGAGGCCCTGCAAGTATCTaGGACTCGCCCATCATACTTGCTAGTAATGAGACC +
Preference number: 3 (lower is better)
Translates to: PLVALDGGPASI*DSPIILASNET
Trigger: GGTCTCATTACTAGCAAGTATGATGGGCGAGTCCCAGATACTTGCAGGGCCTCCATCAAGGGCTACCAGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570587.5
3UTR-3UTR CAA 90 bp AACTCACTCACTAGGTTATTACCCTTTGATGACATTTCAAGGGCCCCTTTTGAGCGAAGCCGGGACTCGTaGGTGGGCGGGGCTAGTCTG +
Preference number: 3 (lower is better)
Translates to: NSLTRLLPFDDISRAPFERSRDS*VGGASL
Trigger: CAGACTAGCCCCGCCCACCAACGAGTCCCGGCTTCG...CTCAAAAGGGGCCCTTGAAATGTCATCAAAGGGTAATAACCTAGTGAGTGAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000303790.2
3UTR TCA 72 bp GGTGCTGCTTTTACCCTCCATAGGACAGTTGGGGTCTaGGCGATTGGCAAAGACAATGTCCACGTATCCCAG +
Preference number: 3 (lower is better)
Translates to: GAAFTLHRTVGV*AIGKDNVHVSQ
Trigger: CTGGGATACGTGGACATTGTCTTTGCCAATCGCTCAGACCCCAACTGTCCTATGGAGGGTAAAAGCAGCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570587.5
3UTR GCA 72 bp CGAGATCGTGCCATTACACTCCAGCCCTCAATGATGTaGTTTCGGCTTAAACCTCGCTCGGTTTCTGCCTGT +
Preference number: 3 (lower is better)
Translates to: RDRAITLQPSMM*FRLKPRSVSAC
Trigger: ACAGGCAGAAACCGAGCGAGGTTTAAGCCGAAAGCACATCATTGAGGGCTGGAGTGTAATGGCACGATCTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570587.5
3UTR CCA 72 bp CAGGCCCTCAGGCAGAGTGCTGTGCCAAATGGTAGATaGCAGGTTGGAAGAGGTAAACCAAGTCAAGTTCAG +
Preference number: 3 (lower is better)
Translates to: QALRQSAVPNGR*QVGRGKPSQVQ
Trigger: CTGAACTTGACTTGGTTTACCTCTTCCAACCTGCCATCTACCATTTGGCACAGCACTCTGCCTGAGGGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570587.5
ENST00000570852.1
3UTR-3UTR CAA 90 bp CCTCTACCTTTGTCAGTGCTGTGCCACTGTAGACCCCACCCTGACCGCCCTCCTTACACTGTATGTTTCTaGTATGTGCTGGGTTTTTGT +
Preference number: 3 (lower is better)
Translates to: PLPLSVLCHCRPHPDRPPYTVCF*YVLGFC
Trigger: ACAAAAACCCAGCACATACAAGAAACATACAGTGTA...AGGAGGGCGGTCAGGGTGGGGTCTACAGTGGCACAGCACTGACAAAGGTAGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303790.2
3UTR TCA 72 bp GGCTGGGAGGAATTTTGTTTGATTGTGGTGAGTTTGTaGGACCAGGCCCTCAGGCAGAGTGCTGTGCCAAAT +
Preference number: 3 (lower is better)
Translates to: GWEEFCLIVVSL*DQALRQSAVPN
Trigger: ATTTGGCACAGCACTCTGCCTGAGGGCCTGGTCTCACAAACTCACCACAATCAAACAAAATTCCTCCCAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570587.5
ENST00000570852.1
3UTR TCA 72 bp GCCACTGTCCAGAGTCTCCATTCCCTCTTATCACATTaGAGACGTGCAGTCTGGTTTGTCCTTCTTCTGGGG +
Preference number: 3 (lower is better)
Translates to: ATVQSLHSLLSH*RRAVWFVLLLG
Trigger: CCCCAGAAGAAGGACAAACCAGACTGCACGTCTTCAATGTGATAAGAGGGAATGGAGACTCTGGACAGTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570587.5
ENST00000570852.1
3UTR GCA 72 bp GTTTTCCAAGGACCACCCCGGCCACTTTCACCAGACTaGAGCGTAGATGTGCTATTACATTTCCCTCTACCT +
Preference number: 3 (lower is better)
Translates to: VFQGPPRPLSPD*SVDVLLHFPLP
Trigger: AGGTAGAGGGAAATGTAATAGCACATCTACGCTGCAGTCTGGTGAAAGTGGCCGGGGTGGTCCTTGGAAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303790.2
3UTR-3UTR CAA 90 bp AAACAGGTTTACACCATGCTCATAGGCTACAGTCAGCACATCCTCTGCTGTCTCGACGTGCAGTCTGGTTaGTCCTTCTTCTGGGGTCTT +
Preference number: 3 (lower is better)
Translates to: KQVYTMLIGYSQHILCCLDVQSG*SFFWGL
Trigger: AAGACCCCAGAAGAAGGACAAACCAGACTGCACGTC...GAGACAGCAGAGGATGTGCTGACTGTAGCCTATGAGCATGGTGTAAACCTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570587.5
3UTR CCA 72 bp TGCTACTTTCTCTCTCGACCCCACTGCAAAAGGATATaGCTTTGTTCATGCGTATCACTACTCGAAGCCGGG +
Preference number: 3 (lower is better)
Translates to: CYFLSRPHCKRI*LCSCVSLLEAG
Trigger: CCCGGCTTCGAGTAGTGATACGCATGAACAAAGCCATATCCTTTTGCAGTGGGGTCGAGAGAGAAAGTAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303790.2
3UTR-3UTR CAA 90 bp GTCATCTGTGGGTTGTGTGCAGTGAGGGGCTGGGAGGAATTTTGTTTGATTGTGATGGTAGATGGCAGGTaGGAAGAGGTAAACCAAGTC +
Preference number: 3 (lower is better)
Translates to: VICGLCAVRGWEEFCLIVMVDGR*EEVNQV
Trigger: GACTTGGTTTACCTCTTCCAACCTGCCATCTACCAT...CACAATCAAACAAAATTCCTCCCAGCCCCTCACTGCACACAACCCACAGATGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000570587.5
ENST00000570852.1
3UTR-3UTR CAA 90 bp ACTGTGAGGATCAAGCTGAGGTTTATTTACAGTTACCTGGGAAGTCTTACAGAGGCTCATGCCCGGGATTaGCAAGAAGGGCCTAGAAAG +
Preference number: 3 (lower is better)
Translates to: TVRIKLRFIYSYLGSLTEAHARD*QEGPRK
Trigger: CTTTCTAGGCCCTTCTTGCAAATCCCGGGCATGAGC...CTCTGTAAGACTTCCCAGGTAACTGTAAATAAACCTCAGCTTGATCCTCACAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303790.2
3UTR-3UTR CAA 90 bp CAAGCTGAGGTTTATTTACAGTTACCTGGGAAGTCTTACAGAGAAGGGGCCATCTTTCAAGGGCCCCTTTaGAGGTACACTGTATGTTTC +
Preference number: 3 (lower is better)
Translates to: QAEVYLQLPGKSYREGAIFQGPL*RYTVCF
Trigger: GAAACATACAGTGTACCTCAAAAGGGGCCCTTGAAA...GATGGCCCCTTCTCTGTAAGACTTCCCAGGTAACTGTAAATAAACCTCAGCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303790.2
3UTR TCA 72 bp CTAGGAATTTTCTCAAAAGGACAAGTGAACCATATGTaGCTGTTCCTCTGGAGCCACTGTCCAGAGTCTCCA +
Preference number: 3 (lower is better)
Translates to: LGIFSKGQVNHM*LFLWSHCPESP
Trigger: TGGAGACTCTGGACAGTGGCTCCAGAGGAACAGTCACATATGGTTCACTTGTCCTTTTGAGAAAATTCCTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000570587.5
ENST00000570852.1
3UTR-3UTR CAA 90 bp GACTGCAGCGTAGATGTGCTATTACATTTCCCTCTACCTTTGTCAGTGCTGTGCCAAAAGGATATGGCTTaGTTCATGCGTATCACTACT +
Preference number: 3 (lower is better)
Translates to: DCSVDVLLHFPLPLSVLCQKDMA*FMRITT
Trigger: AGTAGTGATACGCATGAACAAAGCCATATCCTTTTG...GCACAGCACTGACAAAGGTAGAGGGAAATGTAATAGCACATCTACGCTGCAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303790.2
3UTR CCA 72 bp AGAAAGAGGAGGAACAAAATTATGAAGCCAGATTTCTaGGTTCTAAGGAATGTGGTAGCTGAAGGAAGAAAA +
Preference number: 3 (lower is better)
Translates to: RKRRNKIMKPDF*VLRNVVAEGRK
Trigger: TTTTCTTCCTTCAGCTACCACATTCCTTAGAACCCAGAAATCTGGCTTCATAATTTTGTTCCTCCTCTTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303790.2
CDS-3UTR GCA 90 bp ACTCGAAGCCGGGACTCGTTGGTGGGCGGGGCTAGTCTGGCTCCGGCCGCTGCGAGTGAGCCGAGATCGTaGCATTACACTCCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: TRSRDSLVGGASLAPAAASEPRS*HYTPAL
Trigger: GAGGGCTGGAGTGTAATGGCACGATCTCGGCTCACT...CGCAGCGGCCGGAGCCAGACTAGCCCCGCCCACCAACGAGTCCCGGCTTCGAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570587.5
3UTR CAA 72 bp TTGTTCATGCGTATCACTACTCGAAGCCGGGACTCGTaGGTGGGCGGGGCTAGTCTGGCTCCGGCCGCTGCG +
Preference number: 4 (lower is better)
Translates to: LFMRITTRSRDS*VGGASLAPAAA
Trigger: CGCAGCGGCCGGAGCCAGACTAGCCCCGCCCACCAACGAGTCCCGGCTTCGAGTAGTGATACGCATGAACAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303790.2
ENST00000570587.5
3UTR CAA 72 bp GCAGAGAGCCGACGGCGAGTAGCTCATGCCCGGGATTaGCAAGAAGGGCCTAGAAAGACGCAGCAGGGGGCG +
Preference number: 4 (lower is better)
Translates to: AESRRRVAHARD*QEGPRKTQQGA
Trigger: CGCCCCCTGCTGCGTCTTTCTAGGCCCTTCTTGCAAATCCCGGGCATGAGCTACTCGCCGTCGGCTCTCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000303790.2
CDS-3UTR TCA 90 bp AGAAGCAGCGGGAAGGGGTGGAGCCTCCATTATGGACTTAGATTATCAGCCCCCGGAGGAAAGGCAGATTaGGGACCGCCCCCGGGGCCC +
Preference number: 4 (lower is better)
Translates to: RSSGKGWSLHYGLRLSAPGGKAD*GPPPGP
Trigger: GGGCCCCGGGGGCGGTCCTCAATCTGCCTTTCCTCC...GGGGGCTGATAATCTAAGTCCATAATGGAGGCTCCACCCCTTCCCGCTGCTTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000570587.5
CDS-3UTR GCA 90 bp ACAGAAGCAGCGGGAAGGGGTGGAGCCTCCATTATGGACTTAGATTATCAGCCCCCCGCGGGGGCGGGCTaGTGGAGGTCGCGAGGTTTG +
Preference number: 4 (lower is better)
Translates to: TEAAGRGGASIMDLDYQPPAGAG*WRSRGL
Trigger: CAAACCTCGCGACCTCCAGCAGCCCGCCCCCGCGGG...GGGCTGATAATCTAAGTCCATAATGGAGGCTCCACCCCTTCCCGCTGCTTCTGT
62% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000570852.1
CDS-3UTR GCA 90 bp GACAGTTGGGGTCTGAGCGATTGGCAAAGACAATGTCCACGTATCCCAGCTGGACGGGGCTCGGGCGGGTaGAGCGACACCGGGTTGGGT +
Preference number: 4 (lower is better)
Translates to: DSWGLSDWQRQCPRIPAGRGSGG*SDTGLG
Trigger: ACCCAACCCGGTGTCGCTGCACCCGCCCGAGCCCCG...TCCAGCTGGGATACGTGGACATTGTCTTTGCCAATCGCTCAGACCCCAACTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570587.5
CDS-3UTR GCA 90 bp CTAGGTTCCTGCAAGATACAGAAGCAGCGGGAAGGGGTGGAGCCTCCATTATGGTCTGGCTCCGGCCGCTaGGTGGAGGGATCCGGAGCG +
Preference number: 4 (lower is better)
Translates to: LGSCKIQKQREGVEPPLWSGSGR*VEGSGA
Trigger: CGCTCCGGATCCCTCCACGCAGCGGCCGGAGCCAGA...CCATAATGGAGGCTCCACCCCTTCCCGCTGCTTCTGTATCTTGCAGGAACCTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570587.5
CDS-3UTR CCA 90 bp CCAAATGTGACCCAGGTACCTAGGCCAAGACAGGATACCCGAAGACCAGACTTCCACCTGCATGCTGGCTaGCCGAGGCGGGGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: PNVTQVPRPRQDTRRPDFHLHAG*PRRGRG
Trigger: CCCCCTCCCCCGCCTCGGCCAGCCAGCATGCAGGTG...GAAGTCTGGTCTTCGGGTATCCTGTCTTGGCCTAGGTACCTGGGTCACATTTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570852.1
CDS-3UTR CCA 90 bp ACTCGAAGCCGGGACTCGTTGGTGGGCGGGGCTAGTCTGGCTCCGGCCGCTGCGCGACAGACTACTTCTTaGAATGCGGCTTGTTTCCCA +
Preference number: 4 (lower is better)
Translates to: TRSRDSLVGGASLAPAAARQTTS*NAACFP
Trigger: TGGGAAACAAGCCGCATTCCAAGAAGTAGTCTGTCG...CGCAGCGGCCGGAGCCAGACTAGCCCCGCCCACCAACGAGTCCCGGCTTCGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570587.5
CDS-3UTR GCA 90 bp GTTCCTGCAAGATACAGAAGCAGCGGGAAGGGGTGGAGCCTCCATTATGGACTTGGGTCGGGGAACCAGTaGAGCTCGGGCCTTGGGGCC +
Preference number: 4 (lower is better)
Translates to: VPARYRSSGKGWSLHYGLGSGNQ*SSGLGA
Trigger: GGCCCCAAGGCCCGAGCTGCACTGGTTCCCCGACCC...AAGTCCATAATGGAGGCTCCACCCCTTCCCGCTGCTTCTGTATCTTGCAGGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000570852.1
CDS-3UTR GCA 90 bp GAACCAAATGTGACCCAGGTACCTAGGCCAAGACAGGATACCCGAAGACCAGACCAGTGCCTCGGCCGGTaGTCTCTCGGAGGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: EPNVTQVPRPRQDTRRPDQCLGR*SLGGPQ
Trigger: CTGGGGCCCTCCGAGAGAGCACCGGCCGAGGCACTG...GTCTGGTCTTCGGGTATCCTGTCTTGGCCTAGGTACCTGGGTCACATTTGGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570852.1
CDS-3UTR CCA 90 bp GTTCCTGCAAGATACAGAAGCAGCGGGAAGGGGTGGAGCCTCCATTATGGACTTGCAGCGACACCGGGTTaGGTCCCTGCGCCCGCGACA +
Preference number: 4 (lower is better)
Translates to: VPARYRSSGKGWSLHYGLAATPG*VPAPAT
Trigger: TGTCGCGGGCGCAGGGACCCAACCCGGTGTCGCTGC...AAGTCCATAATGGAGGCTCCACCCCTTCCCGCTGCTTCTGTATCTTGCAGGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570587.5
CDS-3UTR CCA 90 bp GCGACAGACTACTTCTTGGAATGCGGCTTGTTTCCCAGGAGCCCGTCTATTTCCTGGGCGGGGCTAGTCTaGCTCCGGCCGCTGCGTGGA +
Preference number: 4 (lower is better)
Translates to: ATDYFLECGLFPRSPSISWAGLV*LRPLRG
Trigger: TCCACGCAGCGGCCGGAGCCAGACTAGCCCCGCCCA...GGAAATAGACGGGCTCCTGGGAAACAAGCCGCATTCCAAGAAGTAGTCTGTCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570587.5
CDS-3UTR TCA 90 bp TGTAGCGCGCCCAGGTGTTCTATCAACTGCTCCGCACTCGACACCCCCAGCAAGATTGTGGTGAGTTTGTaGGACCAGGCCCTCAGGCAG +
Preference number: 4 (lower is better)
Translates to: CSAPRCSINCSALDTPSKIVVSL*DQALRQ
Trigger: CTGCCTGAGGGCCTGGTCTCACAAACTCACCACAAT...CTTGCTGGGGGTGTCGAGTGCGGAGCAGTTGATAGAACACCTGGGCGCGCTACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570587.5
CDS-3UTR GCA 90 bp GACAGTTGGGGTCTGAGCGATTGGCAAAGACAATGTCCACGTATCCCAGCTGGACAAGCTGGGCCACGGTaGAGCCCAGCTGGTGAGCGA +
Preference number: 4 (lower is better)
Translates to: DSWGLSDWQRQCPRIPAGQAGPR*SPAGER
Trigger: TCGCTCACCAGCTGGGCTGCACCGTGGCCCAGCTTG...TCCAGCTGGGATACGTGGACATTGTCTTTGCCAATCGCTCAGACCCCAACTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570587.5
CDS-3UTR CCA 90 bp GGGCCTATAAGATTGGGCAAGTGCTATCTCCAGAGCAGAGGTCCTAGGAATTTTGCGGGGGCGGGCTGCTaGAGGTCGCGAGGTTTGCGG +
Preference number: 4 (lower is better)
Translates to: GPIRLGKCYLQSRGPRNFAGAGC*RSRGLR
Trigger: CCGCAAACCTCGCGACCTCCAGCAGCCCGCCCCCGC...AAAATTCCTAGGACCTCTGCTCTGGAGATAGCACTTGCCCAATCTTATAGGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570852.1
CDS-3UTR TCA 90 bp GAGGTAAACCAAGTCAAGTTCAGGCATTCAGACAGACAGGGGTCCCTGGCTAGGGTGCAGCCCAGCTGGTaGGCGACAGGAAGAAGGTCC +
Preference number: 4 (lower is better)
Translates to: EVNQVKFRHSDRQGSLARVQPSW*ATGRRS
Trigger: GGACCTTCTTCCTGTCGCTCACCAGCTGGGCTGCAC...CCTAGCCAGGGACCCCTGTCTGTCTGAATGCCTGAACTTGACTTGGTTTACCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570587.5
CDS-3UTR GCA 90 bp TTGGCAAAGACAATGTCCACGTATCCCAGCTGGAGGCGTTCCAGGGATCCTCGCCGGCTGCGAAGGTTCTaGTCGGTACACGCGATAGAC +
Preference number: 4 (lower is better)
Translates to: LAKTMSTYPSWRRSRDPRRLRRF*SVHAID
Trigger: GTCTATCGCGTGTACCGAGCAGAACCTTCGCAGCCG...GCGAGGATCCCTGGAACGCCTCCAGCTGGGATACGTGGACATTGTCTTTGCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570587.5
CDS-3UTR CCA 90 bp AGCCTCCATTATGGACTTAGATTATCAGCCCCCAGCTCCTCTCCTTCCAGACTGGTCTGCGGGGTCAGCTaGCTCAGCACCTGTAGCGCG +
Preference number: 4 (lower is better)
Translates to: SLHYGLRLSAPSSSPSRLVCGVS*LSTCSA
Trigger: CGCGCTACAGGTGCTGAGCCAGCTGACCCCGCAGAC...CAGTCTGGAAGGAGAGGAGCTGGGGGCTGATAATCTAAGTCCATAATGGAGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570587.5
CDS-3UTR CCA 90 bp CCTCAGGTGTCTCAGTCCAAAGAAATTAGACCCAGTGGGCCTATAAGATTGGGCGCCGGGACTCGTTGGTaGGCGGGGCTAGTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: PQVSQSKEIRPSGPIRLGAGTRW*AGLVWL
Trigger: GAGCCAGACTAGCCCCGCCCACCAACGAGTCCCGGC...GCCCAATCTTATAGGCCCACTGGGTCTAATTTCTTTGGACTGAGACACCTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570587.5
CDS-3UTR CCA 90 bp TCCAGAGTCTCCATTCCCTCTTATCACATTGAAGACGTGCAGTCTGGTTTGTCCGGAAAGCGGAAGGGGTaGGCTGCCCGGCCACCCCCA +
Preference number: 4 (lower is better)
Translates to: SRVSIPSYHIEDVQSGLSGKRKG*AARPPP
Trigger: TGGGGGTGGCCGGGCAGCCCACCCCTTCCGCTTTCC...GGACAAACCAGACTGCACGTCTTCAATGTGATAAGAGGGAATGGAGACTCTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570852.1
CDS-3UTR TCA 90 bp GACAGTTGGGGTCTGAGCGATTGGCAAAGACAATGTCCACGTATCCCAGCTGGACCAGCAAGACAGAGCTaGCACCCTCACTGCGGAGAC +
Preference number: 4 (lower is better)
Translates to: DSWGLSDWQRQCPRIPAGPARQS*HPHCGD
Trigger: GTCTCCGCAGTGAGGGTGTCAGCTCTGTCTTGCTGG...TCCAGCTGGGATACGTGGACATTGTCTTTGCCAATCGCTCAGACCCCAACTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570587.5
CDS-3UTR CCA 90 bp CCACTGTCCAGAGTCTCCATTCCCTCTTATCACATTGAAGACGTGCAGTCTGGTGAAGCCGGGACTCGTTaGTGGGCGGGGCTAGTCTGG +
Preference number: 4 (lower is better)
Translates to: PLSRVSIPSYHIEDVQSGEAGTR*WAGLVW
Trigger: CCAGACTAGCCCCGCCCACCAACGAGTCCCGGCTTC...ACCAGACTGCACGTCTTCAATGTGATAAGAGGGAATGGAGACTCTGGACAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570587.5
3UTR CAA 72 bp CCTGCGCCCGCGACAGACTACTTCTTGGAATGCGGCTaGTTTCCCAGGAGCCCGTCTATTTCCATCACTGTC +
Preference number: 4 (lower is better)
Translates to: PAPATDYFLECG*FPRSPSISITV
Trigger: GACAGTGATGGAAATAGACGGGCTCCTGGGAAACAAGCCGCATTCCAAGAAGTAGTCTGTCGCGGGCGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570587.5
CDS-3UTR TCA 90 bp CCAGTTACTCGAGACGCTGAGGTAGGAGAATCCCTTGAACCCGGGAGGAGGAGGAGGACAGTTGGGGTCTaGGCGATTGGCAAAGACAAT +
Preference number: 4 (lower is better)
Translates to: PVTRDAEVGESLEPGRRRRTVGV*AIGKDN
Trigger: ATTGTCTTTGCCAATCGCTCAGACCCCAACTGTCCT...CCTCCTCCTCCCGGGTTCAAGGGATTCTCCTACCTCAGCGTCTCGAGTAACTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570587.5
CDS-3UTR TCA 90 bp TGTAGCGCGCCCAGGTGTTCTATCAACTGCTCCGCACTCGACACCCCCAGCAAGCTAGAGGGTACCAAGTaGCTGATCCAACTCCAATCT +
Preference number: 4 (lower is better)
Translates to: CSAPRCSINCSALDTPSKLEGTK*LIQLQS
Trigger: AGATTGGAGTTGGATCAGTCACTTGGTACCCTCTAG...CTTGCTGGGGGTGTCGAGTGCGGAGCAGTTGATAGAACACCTGGGCGCGCTACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570587.5
CDS-3UTR TCA 90 bp CCCAGTGGGCCTATAAGATTGGGCAAGTGCTATCTCCAGAGCAGAGGTCCTAGGATTGTGGTGAGTTTGTaGGACCAGGCCCTCAGGCAG +
Preference number: 4 (lower is better)
Translates to: PSGPIRLGKCYLQSRGPRIVVSL*DQALRQ
Trigger: CTGCCTGAGGGCCTGGTCTCACAAACTCACCACAAT...CCTAGGACCTCTGCTCTGGAGATAGCACTTGCCCAATCTTATAGGCCCACTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570587.5
ENST00000570852.1
CDS-3UTR GCA 90 bp TGTGACTGTTCCTCTGGAGCCACTGTCCAGAGTCTCCATTCCCTCTTATCACATCACGCGATAGACACCTaGATGCTGGCTGGCCGAGGC +
Preference number: 4 (lower is better)
Translates to: CDCSSGATVQSLHSLLSHHAIDT*MLAGRG
Trigger: GCCTCGGCCAGCCAGCATGCAGGTGTCTATCGCGTG...ATGTGATAAGAGGGAATGGAGACTCTGGACAGTGGCTCCAGAGGAACAGTCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570852.1
CDS-3UTR GCA 90 bp CCAAATGTGACCCAGGTACCTAGGCCAAGACAGGATACCCGAAGACCAGACTTCACAGACGGTCCTCACTaGTCCGGCTGCGAAGGTTCT +
Preference number: 4 (lower is better)
Translates to: PNVTQVPRPRQDTRRPDFTDGPH*SGCEGS
Trigger: AGAACCTTCGCAGCCGGAGCAGTGAGGACCGTCTGT...GAAGTCTGGTCTTCGGGTATCCTGTCTTGGCCTAGGTACCTGGGTCACATTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570587.5
ENST00000570852.1
CDS-3UTR GCA 90 bp ACTACTTCTTGGAATGCGGCTTGTTTCCCAGGAGCCCGTCTATTTCCATCACTGACCGGGTTGGGTCCCTaGGCCCGCGACAGACTACTT +
Preference number: 4 (lower is better)
Translates to: TTSWNAACFPGARLFPSLTGLGP*ARDRLL
Trigger: AAGTAGTCTGTCGCGGGCGCAGGGACCCAACCCGGT...CAGTGATGGAAATAGACGGGCTCCTGGGAAACAAGCCGCATTCCAAGAAGTAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570587.5
CDS-3UTR GCA 90 bp CCCAGTGGGCCTATAAGATTGGGCAAGTGCTATCTCCAGAGCAGAGGTCCTAGGCATACCTGTATTTCATaGCAGTGCCTCGGCCGGTGC +
Preference number: 4 (lower is better)
Translates to: PSGPIRLGKCYLQSRGPRHTCIS*QCLGRC
Trigger: GCACCGGCCGAGGCACTGGCATGAAATACAGGTATG...CCTAGGACCTCTGCTCTGGAGATAGCACTTGCCCAATCTTATAGGCCCACTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570852.1
CDS-3UTR GCA 90 bp GTTCCTGCAAGATACAGAAGCAGCGGGAAGGGGTGGAGCCTCCATTATGGACTTCATCTGTGGGTTGTGTaGAGTGAGGGGCTGGGAGGA +
Preference number: 4 (lower is better)
Translates to: VPARYRSSGKGWSLHYGLHLWVV*SEGLGG
Trigger: TCCTCCCAGCCCCTCACTGCACACAACCCACAGATG...AAGTCCATAATGGAGGCTCCACCCCTTCCCGCTGCTTCTGTATCTTGCAGGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000570587.5
ENST00000570852.1
CDS-3UTR CCA 90 bp CTGTCCAGAGTCTCCATTCCCTCTTATCACATTGAAGACGTGCAGTCTGGTTTGGGGAGGGAAGAAACGTaGGGGGCGCCAGGAGTGGAG +
Preference number: 4 (lower is better)
Translates to: LSRVSIPSYHIEDVQSGLGREET*GAPGVE
Trigger: CTCCACTCCTGGCGCCCCCCACGTTTCTTCCCTCCC...CAAACCAGACTGCACGTCTTCAATGTGATAAGAGGGAATGGAGACTCTGGACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570852.1
CDS-3UTR CCA 90 bp CTAGGTTCCTGCAAGATACAGAAGCAGCGGGAAGGGGTGGAGCCTCCATTATGGAGCAGCGGGAAGGGGTaGAGCCTCCATTATGGACTT +
Preference number: 4 (lower is better)
Translates to: LGSCKIQKQREGVEPPLWSSGKG*SLHYGL
Trigger: AAGTCCATAATGGAGGCTCCACCCCTTCCCGCTGCT...CCATAATGGAGGCTCCACCCCTTCCCGCTGCTTCTGTATCTTGCAGGAACCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000570587.5
ENST00000570852.1
CDS-3UTR CCA 90 bp CTAGGTTCCTGCAAGATACAGAAGCAGCGGGAAGGGGTGGAGCCTCCATTATGGGGCCTCCCAACGTCCTaGGATTACAGGAATGAGCCA +
Preference number: 4 (lower is better)
Translates to: LGSCKIQKQREGVEPPLWGLPTS*DYRNEP
Trigger: TGGCTCATTCCTGTAATCCCAGGACGTTGGGAGGCC...CCATAATGGAGGCTCCACCCCTTCCCGCTGCTTCTGTATCTTGCAGGAACCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570587.5
CDS-3UTR TCA 90 bp GACAGTTGGGGTCTGAGCGATTGGCAAAGACAATGTCCACGTATCCCAGCTGGATCCACCTTCTCCCTCTaGAACAGATGGTGCTCCGCT +
Preference number: 4 (lower is better)
Translates to: DSWGLSDWQRQCPRIPAGSTFSL*NRWCSA
Trigger: AGCGGAGCACCATCTGTTTCAGAGGGAGAAGGTGGA...TCCAGCTGGGATACGTGGACATTGTCTTTGCCAATCGCTCAGACCCCAACTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570587.5
CDS-3UTR TCA 90 bp CCAGTTACTCGAGACGCTGAGGTAGGAGAATCCCTTGAACCCGGGAGGAGGAGGCAGGAAGAAGGTCCATaGCTTTGGCTTGTTGCTTCT +
Preference number: 4 (lower is better)
Translates to: PVTRDAEVGESLEPGRRRQEEGP*LWLVAS
Trigger: AGAAGCAACAAGCCAAAGTCATGGACCTTCTTCCTG...CCTCCTCCTCCCGGGTTCAAGGGATTCTCCTACCTCAGCGTCTCGAGTAACTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570587.5
CDS-3UTR TCA 90 bp CCCAGTGGGCCTATAAGATTGGGCAAGTGCTATCTCCAGAGCAGAGGTCCTAGGGGACTTAGTGAAGTTTaGAGGGGTCTTGGCGGCCAT +
Preference number: 4 (lower is better)
Translates to: PSGPIRLGKCYLQSRGPRGLSEV*RGLGGH
Trigger: ATGGCCGCCAAGACCCCTTCAAACTTCACTAAGTCC...CCTAGGACCTCTGCTCTGGAGATAGCACTTGCCCAATCTTATAGGCCCACTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570852.1
CDS-3UTR TCA 90 bp GAGGTAAACCAAGTCAAGTTCAGGCATTCAGACAGACAGGGGTCCCTGGCTAGGGTGGGTTGTGTGCAGTaGGGGGCTGGGAGGAATTTT +
Preference number: 4 (lower is better)
Translates to: EVNQVKFRHSDRQGSLARVGCVQ*GAGRNF
Trigger: AAAATTCCTCCCAGCCCCTCACTGCACACAACCCAC...CCTAGCCAGGGACCCCTGTCTGTCTGAATGCCTGAACTTGACTTGGTTTACCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000570587.5
ENST00000570852.1
CDS-3UTR GCA 90 bp GCAAGATACAGAAGCAGCGGGAAGGGGTGGAGCCTCCATTATGGACTTAGATTACCTCACTGCTCCGGCTaGGAAGGTTCTGCTCGGTAC +
Preference number: 4 (lower is better)
Translates to: ARYRSSGKGWSLHYGLRLPHCSG*EGSARY
Trigger: GTACCGAGCAGAACCTTCGCAGCCGGAGCAGTGAGG...TAATCTAAGTCCATAATGGAGGCTCCACCCCTTCCCGCTGCTTCTGTATCTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570587.5
ENST00000570852.1
CDS-3UTR GCA 90 bp CAAGTCAAGTTCAGGCATTCAGACAGACAGGGGTCCCTGGCTAGGCTAGGCAGATCAGGCAGAGTGCTGTaGCAAATGGTAGATGGCAGG +
Preference number: 4 (lower is better)
Translates to: QVKFRHSDRQGSLARLGRSGRVL*QMVDGR
Trigger: CCTGCCATCTACCATTTGGCACAGCACTCTGCCTGA...TCTGCCTAGCCTAGCCAGGGACCCCTGTCTGTCTGAATGCCTGAACTTGACTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570852.1
CDS-3UTR CCA 90 bp GACAGTTGGGGTCTGAGCGATTGGCAAAGACAATGTCCACGTATCCCAGCTGGATCCACTGTGGAGTTTTaGAGGCCTTCTGAGCAGGGG +
Preference number: 4 (lower is better)
Translates to: DSWGLSDWQRQCPRIPAGSTVEF*RPSEQG
Trigger: CCCCTGCTCAGAAGGCCTCCAAAACTCCACAGTGGA...TCCAGCTGGGATACGTGGACATTGTCTTTGCCAATCGCTCAGACCCCAACTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570587.5
CDS-3UTR TCA 90 bp GAGGTAAACCAAGTCAAGTTCAGGCATTCAGACAGACAGGGGTCCCTGGCTAGGGGTAAAGGTCGAGGATaGGGTAAAGGTCTCGGAGGA +
Preference number: 4 (lower is better)
Translates to: EVNQVKFRHSDRQGSLARGKGRG*GKGLGG
Trigger: TCCTCCGAGACCTTTACCTCATCCTCGACCTTTACC...CCTAGCCAGGGACCCCTGTCTGTCTGAATGCCTGAACTTGACTTGGTTTACCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570852.1
CDS-3UTR GCA 90 bp AGATGGCAGGTTGGAAGAGGTAAACCAAGTCAAGTTCAGGCATTCAGACAGACAGGAGGTCGCGAGGTTTaGGGCGGGAGGGAAGAAACG +
Preference number: 4 (lower is better)
Translates to: RWQVGRGKPSQVQAFRQTGGREV*GGREET
Trigger: CGTTTCTTCCCTCCCGCCGCAAACCTCGCGACCTCC...TGTCTGTCTGAATGCCTGAACTTGACTTGGTTTACCTCTTCCAACCTGCCATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570852.1
CDS-3UTR GCA 90 bp AGGTTGGAAGAGGTAAACCAAGTCAAGTTCAGGCATTCAGACAGACAGGGGTCCCGGCTGCGAAGGTTCTaGTCGGTACACGCGATAGAC +
Preference number: 4 (lower is better)
Translates to: RLEEVNQVKFRHSDRQGSRLRRF*SVHAID
Trigger: GTCTATCGCGTGTACCGAGCAGAACCTTCGCAGCCG...GGACCCCTGTCTGTCTGAATGCCTGAACTTGACTTGGTTTACCTCTTCCAACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570587.5
ENST00000570852.1
CDS-3UTR GCA 90 bp AATGAGCCACCGCACCCAGCAAGGAAGTGCTCAGTTTTGAAGGACTGTAAGGTTCATCTGTGGGTTGTGTaGAGTGAGGGGCTGGGAGGA +
Preference number: 4 (lower is better)
Translates to: NEPPHPARKCSVLKDCKVHLWVV*SEGLGG
Trigger: TCCTCCCAGCCCCTCACTGCACACAACCCACAGATG...AACCTTACAGTCCTTCAAAACTGAGCACTTCCTTGCTGGGTGCGGTGGCTCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570587.5
CDS-3UTR CCA 90 bp GTCATCTGTGGGTTGTGTGCAGTGAGGGGCTGGGAGGAATTTTGTTTGATTGTGCTTCTGAGCAGGGGCTaGCTTCCTGCTGAGGGTTTG +
Preference number: 4 (lower is better)
Translates to: VICGLCAVRGWEEFCLIVLLSRG*LPAEGL
Trigger: CAAACCCTCAGCAGGAAGCCAGCCCCTGCTCAGAAG...CACAATCAAACAAAATTCCTCCCAGCCCCTCACTGCACACAACCCACAGATGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000570587.5
3UTR CAA 72 bp CTTTTACCCTCCATAGGACAGTTGGGGTCTGAGCGATaGGCAAAGACAATGTCCACGTATCCCAGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: LLPSIGQLGSER*AKTMSTYPSWR
Trigger: CCTCCAGCTGGGATACGTGGACATTGTCTTTGCCAATCGCTCAGACCCCAACTGTCCTATGGAGGGTAAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570587.5
3UTR CAA 72 bp GAGGCCCTGCAAGTATCTGGGACTCGCCCATCATACTaGCTAGTAATGAGACCACAGGCTAGAGGGTACCAA +
Preference number: 4 (lower is better)
Translates to: EALQVSGTRPSY*LVMRPQARGYQ
Trigger: TTGGTACCCTCTAGCCTGTGGTCTCATTACTAGCAAGTATGATGGGCGAGTCCCAGATACTTGCAGGGCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570587.5
CDS-3UTR TCA 90 bp ACAGAAGCAGCGGGAAGGGGTGGAGCCTCCATTATGGACTTAGATTATCAGCCCTCTGAGAACCAAATGTaGCCCAGGTACCTAGGCCAA +
Preference number: 4 (lower is better)
Translates to: TEAAGRGGASIMDLDYQPSENQM*PRYLGQ
Trigger: TTGGCCTAGGTACCTGGGTCACATTTGGTTCTCAGA...GGGCTGATAATCTAAGTCCATAATGGAGGCTCCACCCCTTCCCGCTGCTTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570587.5
ENST00000570852.1
CDS-3UTR TCA 90 bp GTTCCTGCAAGATACAGAAGCAGCGGGAAGGGGTGGAGCCTCCATTATGGACTTCTGGAGGAATCAGATTaGACTGTCTGGCCATGGAGT +
Preference number: 4 (lower is better)
Translates to: VPARYRSSGKGWSLHYGLLEESD*TVWPWS
Trigger: ACTCCATGGCCAGACAGTTCAATCTGATTCCTCCAG...AAGTCCATAATGGAGGCTCCACCCCTTCCCGCTGCTTCTGTATCTTGCAGGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570587.5
CDS-3UTR TCA 90 bp GTCATCTGTGGGTTGTGTGCAGTGAGGGGCTGGGAGGAATTTTGTTTGATTGTGGTGGGTTGTGTGCAGTaGGGGGCTGGGAGGAATTTT +
Preference number: 4 (lower is better)
Translates to: VICGLCAVRGWEEFCLIVVGCVQ*GAGRNF
Trigger: AAAATTCCTCCCAGCCCCTCACTGCACACAACCCAC...CACAATCAAACAAAATTCCTCCCAGCCCCTCACTGCACACAACCCACAGATGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000570587.5
ENST00000570852.1
CDS-3UTR TCA 90 bp CCAGAGTCTCCATTCCCTCTTATCACATTGAAGACGTGCAGTCTGGTTTGTCCTACTCCTGGGCTTGAATaGTCCTCCTGCCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: PESPFPLITLKTCSLVCPTPGLE*SSCLSL
Trigger: GAGGCTGAGGCAGGAGGATCATTCAAGCCCAGGAGT...AGGACAAACCAGACTGCACGTCTTCAATGTGATAAGAGGGAATGGAGACTCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570587.5
CDS-3UTR GCA 90 bp AGATGGCAGGTTGGAAGAGGTAAACCAAGTCAAGTTCAGGCATTCAGACAGACACCTCACTGCTCCGGCTaGGAAGGTTCTGCTCGGTAC +
Preference number: 4 (lower is better)
Translates to: RWQVGRGKPSQVQAFRQTPHCSG*EGSARY
Trigger: GTACCGAGCAGAACCTTCGCAGCCGGAGCAGTGAGG...TGTCTGTCTGAATGCCTGAACTTGACTTGGTTTACCTCTTCCAACCTGCCATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570587.5
ENST00000570852.1
CDS-3UTR CCA 90 bp GAAATTAGACCCAGTGGGCCTATAAGATTGGGCAAGTGCTATCTCCAGAGCAGATCCACGTATCCCAGCTaGAGGCGTTCCAGGGATCCT +
Preference number: 4 (lower is better)
Translates to: EIRPSGPIRLGKCYLQSRSTYPS*RRSRDP
Trigger: AGGATCCCTGGAACGCCTCCAGCTGGGATACGTGGA...TCTGCTCTGGAGATAGCACTTGCCCAATCTTATAGGCCCACTGGGTCTAATTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570587.5
CDS-3UTR CCA 90 bp GTTCCTGCAAGATACAGAAGCAGCGGGAAGGGGTGGAGCCTCCATTATGGACTTTGGGGTCTGAGCGATTaGCAAAGACAATGTCCACGT +
Preference number: 4 (lower is better)
Translates to: VPARYRSSGKGWSLHYGLWGLSD*QRQCPR
Trigger: ACGTGGACATTGTCTTTGCCAATCGCTCAGACCCCA...AAGTCCATAATGGAGGCTCCACCCCTTCCCGCTGCTTCTGTATCTTGCAGGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570587.5
CDS-3UTR CCA 90 bp AGGACAAGTGAACCATATGTGACTGTTCCTCTGGAGCCACTGTCCAGAGTCTCCAGTTTGAAGGGGTCTTaGCGGCCATCTCAAGCAGTC +
Preference number: 4 (lower is better)
Translates to: RTSEPYVTVPLEPLSRVSSLKGS*RPSQAV
Trigger: GACTGCTTGAGATGGCCGCCAAGACCCCTTCAAACT...GGAGACTCTGGACAGTGGCTCCAGAGGAACAGTCACATATGGTTCACTTGTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570852.1
CDS-3UTR CCA 90 bp CCAAATGTGACCCAGGTACCTAGGCCAAGACAGGATACCCGAAGACCAGACTTCTGTTTGAGTCATCTGTaGGTTGTGTGCAGTGAGGGG +
Preference number: 4 (lower is better)
Translates to: PNVTQVPRPRQDTRRPDFCLSHL*VVCSEG
Trigger: CCCCTCACTGCACACAACCCACAGATGACTCAAACA...GAAGTCTGGTCTTCGGGTATCCTGTCTTGGCCTAGGTACCTGGGTCACATTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570587.5
ENST00000570852.1
CDS-3UTR CCA 90 bp GTCATCTGTGGGTTGTGTGCAGTGAGGGGCTGGGAGGAATTTTGTTTGATTGTGAGCAGCGGGAAGGGGTaGAGCCTCCATTATGGACTT +
Preference number: 4 (lower is better)
Translates to: VICGLCAVRGWEEFCLIVSSGKG*SLHYGL
Trigger: AAGTCCATAATGGAGGCTCCACCCCTTCCCGCTGCT...CACAATCAAACAAAATTCCTCCCAGCCCCTCACTGCACACAACCCACAGATGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000570587.5
ENST00000570852.1
CDS-3UTR CCA 90 bp AGAAGCAGCGGGAAGGGGTGGAGCCTCCATTATGGACTTAGATTATCAGCCCCCAAGGACTGTAAGGTTTaGGGGTGCTGCTTTTACCCT +
Preference number: 4 (lower is better)
Translates to: RSSGKGWSLHYGLRLSAPKDCKV*GCCFYP
Trigger: AGGGTAAAAGCAGCACCCCCAAACCTTACAGTCCTT...GGGGGCTGATAATCTAAGTCCATAATGGAGGCTCCACCCCTTCCCGCTGCTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000570587.5
CDS-3UTR TCA 90 bp CTTTCAGCCTTTCCTGCTGCGTACACTTCGGCGGTGTCAAACAGGTTTACACCATCTGAGAACCAAATGTaGCCCAGGTACCTAGGCCAA +
Preference number: 4 (lower is better)
Translates to: LSAFPAAYTSAVSNRFTPSENQM*PRYLGQ
Trigger: TTGGCCTAGGTACCTGGGTCACATTTGGTTCTCAGA...TGGTGTAAACCTGTTTGACACCGCCGAAGTGTACGCAGCAGGAAAGGCTGAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570587.5
CDS-3UTR GCA 90 bp TCCAGAGTCTCCATTCCCTCTTATCACATTGAAGACGTGCAGTCTGGTTTGTCCTTCAGCCTTTCCTGCTaGGTACACTTCGGCGGTGTC +
Preference number: 4 (lower is better)
Translates to: SRVSIPSYHIEDVQSGLSFSLSC*VHFGGV
Trigger: GACACCGCCGAAGTGTACGCAGCAGGAAAGGCTGAA...GGACAAACCAGACTGCACGTCTTCAATGTGATAAGAGGGAATGGAGACTCTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570587.5
CDS-3UTR GCA 90 bp CCAGAGTCTCCATTCCCTCTTATCACATTGAAGACGTGCAGTCTGGTTTGTCCTAGGTGTTCTATCAACTaGTCCGCACTCGACACCCCC +
Preference number: 4 (lower is better)
Translates to: PESPFPLITLKTCSLVCPRCSIN*SALDTP
Trigger: GGGGGTGTCGAGTGCGGAGCAGTTGATAGAACACCT...AGGACAAACCAGACTGCACGTCTTCAATGTGATAAGAGGGAATGGAGACTCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570587.5
CDS-3UTR GCA 90 bp GGGCCTATAAGATTGGGCAAGTGCTATCTCCAGAGCAGAGGTCCTAGGAATTTTATTTCCATCACTGTCTaGGGGGTCAGCTGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: GPIRLGKCYLQSRGPRNFISITV*GVSWLS
Trigger: GCTGAGCCAGCTGACCCCGCAGACAGTGATGGAAAT...AAAATTCCTAGGACCTCTGCTCTGGAGATAGCACTTGCCCAATCTTATAGGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570587.5
CDS-3UTR GCA 90 bp GCGACAGACTACTTCTTGGAATGCGGCTTGTTTCCCAGGAGCCCGTCTATTTCCAGGGTCTTGCTATGTTaGCCAGACTGTTCTCGAACT +
Preference number: 4 (lower is better)
Translates to: ATDYFLECGLFPRSPSISRVLLC*PDCSRT
Trigger: AGTTCGAGAACAGTCTGGGCAACATAGCAAGACCCT...GGAAATAGACGGGCTCCTGGGAAACAAGCCGCATTCCAAGAAGTAGTCTGTCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570587.5
CDS-3UTR CCA 90 bp GTTCCTGCAAGATACAGAAGCAGCGGGAAGGGGTGGAGCCTCCATTATGGACTTATTAGGAGGGGGAAATaGATGAGGGTAAAGGTCGAG +
Preference number: 4 (lower is better)
Translates to: VPARYRSSGKGWSLHYGLIRRGK*MRVKVE
Trigger: CTCGACCTTTACCCTCATCCATTTCCCCCTCCTAAT...AAGTCCATAATGGAGGCTCCACCCCTTCCCGCTGCTTCTGTATCTTGCAGGAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570852.1
CDS-3UTR CCA 90 bp TACAGAAGCAGCGGGAAGGGGTGGAGCCTCCATTATGGACTTAGATTATCAGCCTGTTTGAGTCATCTGTaGGTTGTGTGCAGTGAGGGG +
Preference number: 4 (lower is better)
Translates to: YRSSGKGWSLHYGLRLSACLSHL*VVCSEG
Trigger: CCCCTCACTGCACACAACCCACAGATGACTCAAACA...GGCTGATAATCTAAGTCCATAATGGAGGCTCCACCCCTTCCCGCTGCTTCTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570587.5
ENST00000570852.1
CDS-3UTR CCA 90 bp CTGGGAGGAATTTTGTTTGATTGTGGTGAGTTTGTGAGACCAGGCCCTCAGGCATTCCTGTCCACATCCTaGAGTCTCAGCCTCCACTGT +
Preference number: 4 (lower is better)
Translates to: LGGILFDCGEFVRPGPQAFLSTS*SLSLHC
Trigger: ACAGTGGAGGCTGAGACTCCAGGATGTGGACAGGAA...TGCCTGAGGGCCTGGTCTCACAAACTCACCACAATCAAACAAAATTCCTCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570587.5
3UTR CAA 72 bp CTTTCTCTCTCGACCCCACTGCAAAAGGATATGGCTTaGTTCATGCGTATCACTACTCGAAGCCGGGACTCG +
Preference number: 4 (lower is better)
Translates to: LSLSTPLQKDMA*FMRITTRSRDS
Trigger: CGAGTCCCGGCTTCGAGTAGTGATACGCATGAACAAAGCCATATCCTTTTGCAGTGGGGTCGAGAGAGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303790.2
3UTR CAA 72 bp TGCAGCGTAGATGTGCTATTACATTTCCCTCTACCTTaGTCAGTGCTGTGCCACTGTAGACCCCACCCTGAC +
Preference number: 4 (lower is better)
Translates to: CSVDVLLHFPLP*SVLCHCRPHPD
Trigger: GTCAGGGTGGGGTCTACAGTGGCACAGCACTGACAAAGGTAGAGGGAAATGTAATAGCACATCTACGCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303790.2
3UTR CAA 72 bp AATGAGCCACCGCACCCAGCAAGGAAGTGCTCAGTTTaGAAGGACTGTAAGGTTTGGGGGTGCTGCTTTTAC +
Preference number: 4 (lower is better)
Translates to: NEPPHPARKCSV*KDCKVWGCCFY
Trigger: GTAAAAGCAGCACCCCCAAACCTTACAGTCCTTCAAAACTGAGCACTTCCTTGCTGGGTGCGGTGGCTCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570587.5
CDS-3UTR TCA 90 bp GAGGGGCTGGGAGGAATTTTGTTTGATTGTGGTGAGTTTGTGAGACCAGGCCCTGTCTCATCTGAGATCTaGGAACCAAATGTGACCCAG +
Preference number: 4 (lower is better)
Translates to: EGLGGILFDCGEFVRPGPVSSEI*EPNVTQ
Trigger: CTGGGTCACATTTGGTTCTCAGATCTCAGATGAGAC...AGGGCCTGGTCTCACAAACTCACCACAATCAAACAAAATTCCTCCCAGCCCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000570587.5
ENST00000570852.1
CDS-3UTR TCA 90 bp TGGAGCCTCCATTATGGACTTAGATTATCAGCCCCCAGCTCCTCTCCTTCCAGAGTCTCATCTGAGATCTaGGAACCAAATGTGACCCAG +
Preference number: 4 (lower is better)
Translates to: WSLHYGLRLSAPSSSPSRVSSEI*EPNVTQ
Trigger: CTGGGTCACATTTGGTTCTCAGATCTCAGATGAGAC...TCTGGAAGGAGAGGAGCTGGGGGCTGATAATCTAAGTCCATAATGGAGGCTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000570587.5
ENST00000570852.1
CDS-3UTR TCA 90 bp AGGACAAGTGAACCATATGTGACTGTTCCTCTGGAGCCACTGTCCAGAGTCTCCGGAAGTGCTCAGTTTTaGAGGACTGTAAGGTTTGGG +
Preference number: 4 (lower is better)
Translates to: RTSEPYVTVPLEPLSRVSGSAQF*RTVRFG
Trigger: CCCAAACCTTACAGTCCTTCAAAACTGAGCACTTCC...GGAGACTCTGGACAGTGGCTCCAGAGGAACAGTCACATATGGTTCACTTGTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570587.5
CDS-3UTR GCA 90 bp TGTCCAGAGTCTCCATTCCCTCTTATCACATTGAAGACGTGCAGTCTGGTTTGTTGTATTTCATGCCAGTaGCTCGGCCGGTGCTCTCTC +
Preference number: 4 (lower is better)
Translates to: CPESPFPLITLKTCSLVCCISCQ*LGRCSL
Trigger: GAGAGAGCACCGGCCGAGGCACTGGCATGAAATACA...ACAAACCAGACTGCACGTCTTCAATGTGATAAGAGGGAATGGAGACTCTGGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570852.1
CDS-3UTR GCA 90 bp CCAGAGTCTCCATTCCCTCTTATCACATTGAAGACGTGCAGTCTGGTTTGTCCTTCTTTCAGCCTTTCCTaGTGCGTACACTTCGGCGGT +
Preference number: 4 (lower is better)
Translates to: PESPFPLITLKTCSLVCPSFSLS*CVHFGG
Trigger: ACCGCCGAAGTGTACGCAGCAGGAAAGGCTGAAAGA...AGGACAAACCAGACTGCACGTCTTCAATGTGATAAGAGGGAATGGAGACTCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570587.5
CDS-3UTR GCA 90 bp CCACTGTCCAGAGTCTCCATTCCCTCTTATCACATTGAAGACGTGCAGTCTGGTACTTCCCTAGGTTCCTaGAAGATACAGAAGCAGCGG +
Preference number: 4 (lower is better)
Translates to: PLSRVSIPSYHIEDVQSGTSLGS*KIQKQR
Trigger: CCGCTGCTTCTGTATCTTGCAGGAACCTAGGGAAGT...ACCAGACTGCACGTCTTCAATGTGATAAGAGGGAATGGAGACTCTGGACAGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570587.5
ENST00000570852.1
CDS-3UTR GCA 90 bp GTCATCTGTGGGTTGTGTGCAGTGAGGGGCTGGGAGGAATTTTGTTTGATTGTGCAGCCCTCAATGATGTaGTTTCGGCTTAAACCTCGC +
Preference number: 4 (lower is better)
Translates to: VICGLCAVRGWEEFCLIVQPSMM*FRLKPR
Trigger: GCGAGGTTTAAGCCGAAAGCACATCATTGAGGGCTG...CACAATCAAACAAAATTCCTCCCAGCCCCTCACTGCACACAACCCACAGATGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570587.5
CDS-3UTR CCA 90 bp TCCAGAGTCTCCATTCCCTCTTATCACATTGAAGACGTGCAGTCTGGTTTGTCCGGCCCTGCAAGTATCTaGGACTCGCCCATCATACTT +
Preference number: 4 (lower is better)
Translates to: SRVSIPSYHIEDVQSGLSGPASI*DSPIIL
Trigger: AAGTATGATGGGCGAGTCCCAGATACTTGCAGGGCC...GGACAAACCAGACTGCACGTCTTCAATGTGATAAGAGGGAATGGAGACTCTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570587.5
CDS-3UTR CCA 90 bp AGCAGAGGTCCTAGGAATTTTCTCAAAAGGACAAGTGAACCATATGTGACTGTTCACGCAATAGCAAGCTaGGCCACGGTGCAGCCCAGC +
Preference number: 4 (lower is better)
Translates to: SRGPRNFLKRTSEPYVTVHAIAS*ATVQPS
Trigger: GCTGGGCTGCACCGTGGCCCAGCTTGCTATTGCGTG...AACAGTCACATATGGTTCACTTGTCCTTTTGAGAAAATTCCTAGGACCTCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570587.5
CDS-3UTR CCA 90 bp GAACCAAATGTGACCCAGGTACCTAGGCCAAGACAGGATACCCGAAGACCAGACTGTGCAGTGAGGGGCTaGGAGGAATTTTGTTTGATT +
Preference number: 4 (lower is better)
Translates to: EPNVTQVPRPRQDTRRPDCAVRG*EEFCLI
Trigger: AATCAAACAAAATTCCTCCCAGCCCCTCACTGCACA...GTCTGGTCTTCGGGTATCCTGTCTTGGCCTAGGTACCTGGGTCACATTTGGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000570587.5
ENST00000570852.1
CDS-3UTR CCA 90 bp CTGTCCAGAGTCTCCATTCCCTCTTATCACATTGAAGACGTGCAGTCTGGTTTGTCTCAGCCTCCACTGTaGAGTTTTGGAGGCCTTCTG +
Preference number: 4 (lower is better)
Translates to: LSRVSIPSYHIEDVQSGLSQPPL*SFGGLL
Trigger: CAGAAGGCCTCCAAAACTCCACAGTGGAGGCTGAGA...CAAACCAGACTGCACGTCTTCAATGTGATAAGAGGGAATGGAGACTCTGGACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570587.5
3UTR CAA 72 bp TACAGAGAAGGGGCCATCATTATTGCTTTAGGTTTATaGCCAGGAGGAAGACTGCAGTTCCCCACTGCCAGG +
Preference number: 4 (lower is better)
Translates to: YREGAIIIALGL*PGGRLQFPTAR
Trigger: CCTGGCAGTGGGGAACTGCAGTCTTCCTCCTGGCAATAAACCTAAAGCAATAATGATGGCCCCTTCTCTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303790.2
3UTR CAA 72 bp AGCCACTGTCCAGAGTCTCCATTCCCTCTTATCACATaGAAGACGTGCAGTCTGGTTTGTCCTTCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: SHCPESPFPLIT*KTCSLVCPSSG
Trigger: CCCAGAAGAAGGACAAACCAGACTGCACGTCTTCAATGTGATAAGAGGGAATGGAGACTCTGGACAGTGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570587.5
ENST00000570852.1
3UTR CAA 72 bp CAGTCCAAAGAAATTAGACCCAGTGGGCCTATAAGATaGGGCAAGTGCTATCTCCAGAGCAGAGGTCCTAGG +
Preference number: 4 (lower is better)
Translates to: QSKEIRPSGPIR*GKCYLQSRGPR
Trigger: CCTAGGACCTCTGCTCTGGAGATAGCACTTGCCCAATCTTATAGGCCCACTGGGTCTAATTTCTTTGGACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570587.5
ENST00000570852.1
CDS-3UTR TCA 90 bp AGGACAAGTGAACCATATGTGACTGTTCCTCTGGAGCCACTGTCCAGAGTCTCCCTCTGCTGTCTCATCTaGGATCTGAGAACCAAATGT +
Preference number: 4 (lower is better)
Translates to: RTSEPYVTVPLEPLSRVSLCCLI*DLRTKC
Trigger: ACATTTGGTTCTCAGATCTCAGATGAGACAGCAGAG...GGAGACTCTGGACAGTGGCTCCAGAGGAACAGTCACATATGGTTCACTTGTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570587.5
CDS-3UTR TCA 90 bp CCTAGGAATTTTCTCAAAAGGACAAGTGAACCATATGTGACTGTTCCTCTGGAGGCCACTGGTAGCCCTTaGTGGAGGCCCTGCAAGTAT +
Preference number: 4 (lower is better)
Translates to: PRNFLKRTSEPYVTVPLEATGSP*WRPCKY
Trigger: ATACTTGCAGGGCCTCCATCAAGGGCTACCAGTGGC...CTCCAGAGGAACAGTCACATATGGTTCACTTGTCCTTTTGAGAAAATTCCTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570587.5
CDS-3UTR GCA 90 bp AGATGGCAGGTTGGAAGAGGTAAACCAAGTCAAGTTCAGGCATTCAGACAGACATCAGGCAGAGTGCTGTaGCAAATGGTAGATGGCAGG +
Preference number: 4 (lower is better)
Translates to: RWQVGRGKPSQVQAFRQTSGRVL*QMVDGR
Trigger: CCTGCCATCTACCATTTGGCACAGCACTCTGCCTGA...TGTCTGTCTGAATGCCTGAACTTGACTTGGTTTACCTCTTCCAACCTGCCATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570587.5
ENST00000570852.1
CDS-3UTR GCA 90 bp CCTCAGGTGTCTCAGTCCAAAGAAATTAGACCCAGTGGGCCTATAAGATTGGGCCACCCAGCAAGGAAGTaGTCAGTTTTGAAGGACTGT +
Preference number: 4 (lower is better)
Translates to: PQVSQSKEIRPSGPIRLGHPARK*SVLKDC
Trigger: ACAGTCCTTCAAAACTGAGCACTTCCTTGCTGGGTG...GCCCAATCTTATAGGCCCACTGGGTCTAATTTCTTTGGACTGAGACACCTGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570587.5
CDS-3UTR GCA 90 bp GAGGGGCTGGGAGGAATTTTGTTTGATTGTGGTGAGTTTGTGAGACCAGGCCCTGATGTAGTTCAGTGGTaGAATCATAGCTCACTGTGG +
Preference number: 4 (lower is better)
Translates to: EGLGGILFDCGEFVRPGPDVVQW*NHSSLW
Trigger: CCACAGTGAGCTATGATTGCACCACTGAACTACATC...AGGGCCTGGTCTCACAAACTCACCACAATCAAACAAAATTCCTCCCAGCCCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570587.5
CDS-3UTR GCA 90 bp GTTCCTCTGGAGCCACTGTCCAGAGTCTCCATTCCCTCTTATCACATTGAAGACGCTCGCACAATTCTTTaGCTCTCTTCCTGTCCACAT +
Preference number: 4 (lower is better)
Translates to: VPLEPLSRVSIPSYHIEDARTIL*LSSCPH
Trigger: ATGTGGACAGGAAGAGAGGCAAAGAATTGTGCGAGC...GTCTTCAATGTGATAAGAGGGAATGGAGACTCTGGACAGTGGCTCCAGAGGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570587.5
CDS-3UTR CCA 90 bp TACAGAAGCAGCGGGAAGGGGTGGAGCCTCCATTATGGACTTAGATTATCAGCCGTGCCAAATGGTAGATaGCAGGTTGGAAGAGGTAAA +
Preference number: 4 (lower is better)
Translates to: YRSSGKGWSLHYGLRLSAVPNGR*QVGRGK
Trigger: TTTACCTCTTCCAACCTGCCATCTACCATTTGGCAC...GGCTGATAATCTAAGTCCATAATGGAGGCTCCACCCCTTCCCGCTGCTTCTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570587.5
ENST00000570852.1
3UTR CAA 72 bp TCAGGCAGAGTGCTGTGCCAAATGGTAGATGGCAGGTaGGAAGAGGTAAACCAAGTCAAGTTCAGGCATTCA +
Preference number: 4 (lower is better)
Translates to: SGRVLCQMVDGR*EEVNQVKFRHS
Trigger: TGAATGCCTGAACTTGACTTGGTTTACCTCTTCCAACCTGCCATCTACCATTTGGCACAGCACTCTGCCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570587.5
ENST00000570852.1
CDS-3UTR TCA 90 bp AGGTTGGAAGAGGTAAACCAAGTCAAGTTCAGGCATTCAGACAGACAGGGGTCCAGTGATGACATAGCTTaGTCTCCTCCAACCTTTGCT +
Preference number: 4 (lower is better)
Translates to: RLEEVNQVKFRHSDRQGSSDDIA*SPPTFA
Trigger: AGCAAAGGTTGGAGGAGATCAAGCTATGTCATCACT...GGACCCCTGTCTGTCTGAATGCCTGAACTTGACTTGGTTTACCTCTTCCAACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570587.5
CDS-3UTR TCA 90 bp CCATTCCCTCTTATCACATTGAAGACGTGCAGTCTGGTTTGTCCTTCTTCTGGGGCCTGGCTAACGTGGTaGAACCCCATTTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: PFPLITLKTCSLVCPSSGAWLTW*NPISTK
Trigger: TTTAGTAGAAATGGGGTTTCACCACGTTAGCCAGGC...CCCAGAAGAAGGACAAACCAGACTGCACGTCTTCAATGTGATAAGAGGGAATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570587.5
CDS-3UTR GCA 90 bp AGCAGAGGTCCTAGGAATTTTCTCAAAAGGACAAGTGAACCATATGTGACTGTTACAGACGGTCCTCACTaGTCCGGCTGCGAAGGTTCT +
Preference number: 4 (lower is better)
Translates to: SRGPRNFLKRTSEPYVTVTDGPH*SGCEGS
Trigger: AGAACCTTCGCAGCCGGAGCAGTGAGGACCGTCTGT...AACAGTCACATATGGTTCACTTGTCCTTTTGAGAAAATTCCTAGGACCTCTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000570587.5
ENST00000570852.1
CDS-3UTR GCA 90 bp GTCATCTGTGGGTTGTGTGCAGTGAGGGGCTGGGAGGAATTTTGTTTGATTGTGTGGCTTGTTGCTTCTTaGCATCTTCACTCTGCACTT +
Preference number: 4 (lower is better)
Translates to: VICGLCAVRGWEEFCLIVWLVAS*HLHSAL
Trigger: AAGTGCAGAGTGAAGATGGCAAGAAGCAACAAGCCA...CACAATCAAACAAAATTCCTCCCAGCCCCTCACTGCACACAACCCACAGATGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570587.5
CDS-3UTR TCA 90 bp TGTGACTGTTCCTCTGGAGCCACTGTCCAGAGTCTCCATTCCCTCTTATCACATTCTCAAAAGGACAAGTaGACCATATGTGACTGTTCC +
Preference number: 4 (lower is better)
Translates to: CDCSSGATVQSLHSLLSHSQKDK*TICDCS
Trigger: GGAACAGTCACATATGGTTCACTTGTCCTTTTGAGA...ATGTGATAAGAGGGAATGGAGACTCTGGACAGTGGCTCCAGAGGAACAGTCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570587.5
ENST00000570852.1
CDS-3UTR TCA 90 bp GTCATCTGTGGGTTGTGTGCAGTGAGGGGCTGGGAGGAATTTTGTTTGATTGTGTCTCAAAAGGACAAGTaGACCATATGTGACTGTTCC +
Preference number: 4 (lower is better)
Translates to: VICGLCAVRGWEEFCLIVSQKDK*TICDCS
Trigger: GGAACAGTCACATATGGTTCACTTGTCCTTTTGAGA...CACAATCAAACAAAATTCCTCCCAGCCCCTCACTGCACACAACCCACAGATGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000570587.5
ENST00000570852.1
CDS-3UTR GCA 90 bp TGTCCAGAGTCTCCATTCCCTCTTATCACATTGAAGACGTGCAGTCTGGTTTGTTTGCCATCTTCACTCTaGACTTTGTCCTTGAGCCAC +
Preference number: 4 (lower is better)
Translates to: CPESPFPLITLKTCSLVCLPSSL*TLSLSH
Trigger: GTGGCTCAAGGACAAAGTGCAGAGTGAAGATGGCAA...ACAAACCAGACTGCACGTCTTCAATGTGATAAGAGGGAATGGAGACTCTGGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570587.5
CDS-3UTR CCA 90 bp AAAAGGACAAGTGAACCATATGTGACTGTTCCTCTGGAGCCACTGTCCAGAGTCTGTGCAGTGAGGGGCTaGGAGGAATTTTGTTTGATT +
Preference number: 4 (lower is better)
Translates to: KRTSEPYVTVPLEPLSRVCAVRG*EEFCLI
Trigger: AATCAAACAAAATTCCTCCCAGCCCCTCACTGCACA...GACTCTGGACAGTGGCTCCAGAGGAACAGTCACATATGGTTCACTTGTCCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000570587.5
ENST00000570852.1
CDS-3UTR GCA 90 bp CCTAGGAATTTTCTCAAAAGGACAAGTGAACCATATGTGACTGTTCCTCTGGAGACTTCCCTAGGTTCCTaGAAGATACAGAAGCAGCGG +
Preference number: 4 (lower is better)
Translates to: PRNFLKRTSEPYVTVPLETSLGS*KIQKQR
Trigger: CCGCTGCTTCTGTATCTTGCAGGAACCTAGGGAAGT...CTCCAGAGGAACAGTCACATATGGTTCACTTGTCCTTTTGAGAAAATTCCTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000570587.5
ENST00000570852.1
CDS-3UTR GCA 90 bp CTCCAGAGCAGAGGTCCTAGGAATTTTCTCAAAAGGACAAGTGAACCATATGTGATGACTTTGGCTTGTTaGTTCTTGCCATCTTCACTC +
Preference number: 4 (lower is better)
Translates to: LQSRGPRNFLKRTSEPYVMTLAC*FLPSSL
Trigger: GAGTGAAGATGGCAAGAAGCAACAAGCCAAAGTCAT...CACATATGGTTCACTTGTCCTTTTGAGAAAATTCCTAGGACCTCTGCTCTGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570587.5
CDS-3UTR CCA 90 bp CCTAGGAATTTTCTCAAAAGGACAAGTGAACCATATGTGACTGTTCCTCTGGAGGTGCCAAATGGTAGATaGCAGGTTGGAAGAGGTAAA +
Preference number: 4 (lower is better)
Translates to: PRNFLKRTSEPYVTVPLEVPNGR*QVGRGK
Trigger: TTTACCTCTTCCAACCTGCCATCTACCATTTGGCAC...CTCCAGAGGAACAGTCACATATGGTTCACTTGTCCTTTTGAGAAAATTCCTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000570587.5
ENST00000570852.1
3UTR CAA 72 bp GATGACATCACAACTCACTCACTAGGTTATTACCCTTaGATGACATTTCAAGGGCCCCTTTTGAGGTACACT +
Preference number: 4 (lower is better)
Translates to: DDITTHSLGYYP*MTFQGPLLRYT
Trigger: AGTGTACCTCAAAAGGGGCCCTTGAAATGTCATCAAAGGGTAATAACCTAGTGAGTGAGTTGTGATGTCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303790.2
CDS GCA 90 bp CGGGGTCCACACAGACGGTCCTCACTGCTCCGGCTGCGAAGGTTCTaGTCGGTACACGCGATAGACACCTGCATGCTGGCTGGCCGAGGC +
Preference number: 5 (lower is better)
Translates to: RGPHRRSSLLRLRRF*SVHAIDTCMLAGRG
Trigger: GCCTCGGCCAGCCAGCATGCAGGTGTCTATCGCGTGTACCGAGCAGAACCTTCGCAGCCGGAGCAGTGAGGACCGTCTGTGTGGACCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303790.3
ENST00000570852.1
CDS CCA 90 bp CGGGCTGCTGGAGGTCGCGAGGTTTGCGGCGGGAGGGAAGAAACGTaGGGGGCGCCAGGAGTGGAGATATTCAGTTACGGGGGACACAGG +
Preference number: 5 (lower is better)
Translates to: RAAGGREVCGGREET*GAPGVEIFSYGGHR
Trigger: CCTGTGTCCCCCGTAACTGAATATCTCCACTCCTGGCGCCCCCCACGTTTCTTCCCTCCCGCCGCAAACCTCGCGACCTCCAGCAGCCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000303790.3
ENST00000570852.1
CDS-3UTR CAA 90 bp ACTCGAAGCCGGGACTCGTTGGTGGGCGGGGCTAGTCTGGCTCCGGCCGCTGCGGCGACAGACTACTTCTaGGAATGCGGCTTGTTTCCC +
Preference number: 5 (lower is better)
Translates to: TRSRDSLVGGASLAPAAAATDYF*ECGLFP
Trigger: GGGAAACAAGCCGCATTCCAAGAAGTAGTCTGTCGC...CGCAGCGGCCGGAGCCAGACTAGCCCCGCCCACCAACGAGTCCCGGCTTCGAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570587.5
CDS GCA 90 bp GATGGGCTTGGGAGCATGTCAGGAGGAGACAGGGCCCCTGCAGGGTaGAATGTCTCACCAATAGCAAGCTGGGCCACGGTGCAGCCCAGC +
Preference number: 5 (lower is better)
Translates to: DGLGSMSGGDRAPAG*NVSPIASWATVQPS
Trigger: GCTGGGCTGCACCGTGGCCCAGCTTGCTATTGGTGAGACATTGCACCCTGCAGGGGCCCTGTCTCCTCCTGACATGCTCCCAAGCCCATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572275.1
CDS-3UTR CAA 90 bp GACAGTTGGGGTCTGAGCGATTGGCAAAGACAATGTCCACGTATCCCAGCTGGATGCAGCGACACCGGGTaGGGTCCCTGCGCCCGCGAC +
Preference number: 5 (lower is better)
Translates to: DSWGLSDWQRQCPRIPAGCSDTG*GPCARD
Trigger: GTCGCGGGCGCAGGGACCCAACCCGGTGTCGCTGCA...TCCAGCTGGGATACGTGGACATTGTCTTTGCCAATCGCTCAGACCCCAACTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570587.5
CDS-3UTR CAA 90 bp CTAGGTTCCTGCAAGATACAGAAGCAGCGGGAAGGGGTGGAGCCTCCATTATGGCGAAGCCGGGACTCGTaGGTGGGCGGGGCTAGTCTG +
Preference number: 5 (lower is better)
Translates to: LGSCKIQKQREGVEPPLWRSRDS*VGGASL
Trigger: CAGACTAGCCCCGCCCACCAACGAGTCCCGGCTTCG...CCATAATGGAGGCTCCACCCCTTCCCGCTGCTTCTGTATCTTGCAGGAACCTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570587.5
CDS-3UTR CAA 90 bp GAAGCCGGGACTCGTTGGTGGGCGGGGCTAGTCTGGCTCCGGCCGCTGCGTGGACTTCCTGCTGAGGGTTaGAGGAAGTGCTCAATTTTT +
Preference number: 5 (lower is better)
Translates to: EAGTRWWAGLVWLRPLRGLPAEG*RKCSIF
Trigger: AAAAATTGAGCACTTCCTCAAACCCTCAGCAGGAAG...TCCACGCAGCGGCCGGAGCCAGACTAGCCCCGCCCACCAACGAGTCCCGGCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570587.5
CDS-3UTR CAA 90 bp CGTATCACTACTCGAAGCCGGGACTCGTTGGTGGGCGGGGCTAGTCTGGCTCCGGACGTGCAGTCTGGTTaGTCCTTCTTCTGGGGTCTT +
Preference number: 5 (lower is better)
Translates to: RITTRSRDSLVGGASLAPDVQSG*SFFWGL
Trigger: AAGACCCCAGAAGAAGGACAAACCAGACTGCACGTC...CGGAGCCAGACTAGCCCCGCCCACCAACGAGTCCCGGCTTCGAGTAGTGATACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570587.5
CDS GCA 90 bp GTTTTAGGATGGGCTTGGGAGCATGTCAGGAGGAGACAGGGCCCCTaGAGGGTGCAATGTCTCACCAATAGCAAGCTGGGCCACGGTGCA +
Preference number: 5 (lower is better)
Translates to: VLGWAWEHVRRRQGP*RVQCLTNSKLGHGA
Trigger: TGCACCGTGGCCCAGCTTGCTATTGGTGAGACATTGCACCCTGCAGGGGCCCTGTCTCCTCCTGACATGCTCCCAAGCCCATCCTAAAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572275.1
CDS-3UTR CAA 90 bp TGGAGCCTCCATTATGGACTTAGATTATCAGCCCCCAGCTCCTCTCCTTCCAGATGGAGGAAAGGCAGATaGAGGACCGCCCCCGGGGCC +
Preference number: 5 (lower is better)
Translates to: WSLHYGLRLSAPSSSPSRWRKGR*RTAPGA
Trigger: GGCCCCGGGGGCGGTCCTCAATCTGCCTTTCCTCCA...TCTGGAAGGAGAGGAGCTGGGGGCTGATAATCTAAGTCCATAATGGAGGCTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000570587.5
CDS CCA 90 bp TCTCTGAAGACAAGCGTCCTCCCTAGGGACAAACCAGTTTTAGGATaGGCTTGGGAGCATGTCAGGAGGAGACAGGGCCCCTGCAGGGTG +
Preference number: 5 (lower is better)
Translates to: SLKTSVLPRDKPVLG*AWEHVRRRQGPCRV
Trigger: CACCCTGCAGGGGCCCTGTCTCCTCCTGACATGCTCCCAAGCCCATCCTAAAACTGGTTTGTCCCTAGGGAGGACGCTTGTCTTCAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572275.1
CDS-3UTR CAA 90 bp CCACTGTCCAGAGTCTCCATTCCCTCTTATCACATTGAAGACGTGCAGTCTGGTTGGAGGTCGCGAGGTTaGCGGCGGGAGGGAAGAAAC +
Preference number: 5 (lower is better)
Translates to: PLSRVSIPSYHIEDVQSGWRSRG*RREGRN
Trigger: GTTTCTTCCCTCCCGCCGCAAACCTCGCGACCTCCA...ACCAGACTGCACGTCTTCAATGTGATAAGAGGGAATGGAGACTCTGGACAGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570852.1
CDS TCA 90 bp ATAGGTCATGGCTCGCACAATCTCCTCCATAGGACAGTTGGGGTCTaGGCGATTGGCAAAGACAATGTCCACGTATCCCAGCTGGAGGCG +
Preference number: 5 (lower is better)
Translates to: IGHGSHNLLHRTVGV*AIGKDNVHVSQLEA
Trigger: CGCCTCCAGCTGGGATACGTGGACATTGTCTTTGCCAATCGCTCAGACCCCAACTGTCCTATGGAGGAGATTGTGCGAGCCATGACCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303790.3
CDS CCA 90 bp TTGGGGTCTGAGCGATTGGCAAAGACAATGTCCACGTATCCCAGCTaGAGGCGTTCCAGGGATCCTCGCAAGCCCTCAATGATGTGCTTT +
Preference number: 5 (lower is better)
Translates to: LGSERLAKTMSTYPS*RRSRDPRKPSMMCF
Trigger: AAAGCACATCATTGAGGGCTTGCGAGGATCCCTGGAACGCCTCCAGCTGGGATACGTGGACATTGTCTTTGCCAATCGCTCAGACCCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303790.3
CDS-3UTR CAA 90 bp ACAGAAGCAGCGGGAAGGGGTGGAGCCTCCATTATGGACTTAGATTATCAGCCCCAGATGGTGCTCCGCTaGTTCACACACTGGAGGAAT +
Preference number: 5 (lower is better)
Translates to: TEAAGRGGASIMDLDYQPQMVLR*FTHWRN
Trigger: ATTCCTCCAGTGTGTGAACAAGCGGAGCACCATCTG...GGGCTGATAATCTAAGTCCATAATGGAGGCTCCACCCCTTCCCGCTGCTTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570587.5
CDS-3UTR CAA 90 bp CATCTGTGGGTTGTGTGCAGTGAGGGGCTGGGAGGAATTTTGTTTGATTGTGGTCCCTCCATAGGACAGTaGGGGTCTGAGCGATTGGCA +
Preference number: 5 (lower is better)
Translates to: HLWVVCSEGLGGILFDCGPSIGQ*GSERLA
Trigger: TGCCAATCGCTCAGACCCCAACTGTCCTATGGAGGG...ACCACAATCAAACAAAATTCCTCCCAGCCCCTCACTGCACACAACCCACAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000570587.5
CDS-3UTR CAA 90 bp AATGTGACCCAGGTACCTAGGCCAAGACAGGATACCCGAAGACCAGACTTCCCTACTGGAGGAATCAGATaGAACTGTCTGGCCATGGAG +
Preference number: 5 (lower is better)
Translates to: NVTQVPRPRQDTRRPDFPTGGIR*NCLAME
Trigger: CTCCATGGCCAGACAGTTCAATCTGATTCCTCCAGT...AGGGAAGTCTGGTCTTCGGGTATCCTGTCTTGGCCTAGGTACCTGGGTCACATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570587.5
CDS-3UTR CAA 90 bp ACTACTTCTTGGAATGCGGCTTGTTTCCCAGGAGCCCGTCTATTTCCATCACTGTTCTTGGAATGCGGCTaGTTTCCCAGGAGCCCGTCT +
Preference number: 5 (lower is better)
Translates to: TTSWNAACFPGARLFPSLFLECG*FPRSPS
Trigger: AGACGGGCTCCTGGGAAACAAGCCGCATTCCAAGAA...CAGTGATGGAAATAGACGGGCTCCTGGGAAACAAGCCGCATTCCAAGAAGTAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570587.5
CDS CCA 90 bp TATTCAGTTACGGGGGACACAGGAGCAAGGATTAGGAGGGGGAAATaGATGAGGGTAAAGGTCGAGGATGAGGTAAAGGTCTCGGAGGAT +
Preference number: 5 (lower is better)
Translates to: YSVTGDTGARIRRGK*MRVKVEDEVKVSED
Trigger: ATCCTCCGAGACCTTTACCTCATCCTCGACCTTTACCCTCATCCATTTCCCCCTCCTAATCCTTGCTCCTGTGTCCCCCGTAACTGAATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000303790.3
ENST00000570852.1
CDS-3UTR CAA 90 bp GACTACTTCTTGGAATGCGGCTTGTTTCCCAGGAGCCCGTCTATTTCCATCACTTTGGGGTCTGAGCGATaGGCAAAGACAATGTCCACG +
Preference number: 5 (lower is better)
Translates to: DYFLECGLFPRSPSISITLGSER*AKTMST
Trigger: CGTGGACATTGTCTTTGCCAATCGCTCAGACCCCAA...AGTGATGGAAATAGACGGGCTCCTGGGAAACAAGCCGCATTCCAAGAAGTAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570587.5
CDS-3UTR CAA 90 bp AATGTGACCCAGGTACCTAGGCCAAGACAGGATACCCGAAGACCAGACTTCCCTACTCGCCCATCATACTaGCTAGTAATGAGACCACAG +
Preference number: 5 (lower is better)
Translates to: NVTQVPRPRQDTRRPDFPTRPSY*LVMRPQ
Trigger: CTGTGGTCTCATTACTAGCAAGTATGATGGGCGAGT...AGGGAAGTCTGGTCTTCGGGTATCCTGTCTTGGCCTAGGTACCTGGGTCACATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570587.5
CDS-3UTR CAA 90 bp GCAAGATACAGAAGCAGCGGGAAGGGGTGGAGCCTCCATTATGGACTTAGATTAAAGTTTGAAGGGGTCTaGGCGGCCATCTCAAGCAGT +
Preference number: 5 (lower is better)
Translates to: ARYRSSGKGWSLHYGLRLKFEGV*AAISSS
Trigger: ACTGCTTGAGATGGCCGCCAAGACCCCTTCAAACTT...TAATCTAAGTCCATAATGGAGGCTCCACCCCTTCCCGCTGCTTCTGTATCTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570852.1
CDS-3UTR CAA 90 bp GCAAGATACAGAAGCAGCGGGAAGGGGTGGAGCCTCCATTATGGACTTAGATTAGGCTCGCACAATTCTTaGCCTCTCTTCCTGTCCACA +
Preference number: 5 (lower is better)
Translates to: ARYRSSGKGWSLHYGLRLGSHNS*PLFLST
Trigger: TGTGGACAGGAAGAGAGGCAAAGAATTGTGCGAGCC...TAATCTAAGTCCATAATGGAGGCTCCACCCCTTCCCGCTGCTTCTGTATCTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570587.5
CDS-3UTR CAA 90 bp CCAGAGTCTCCATTCCCTCTTATCACATTGAAGACGTGCAGTCTGGTTTGTCCTGACGTGCAGTCTGGTTaGTCCTTCTTCTGGGGTCTT +
Preference number: 5 (lower is better)
Translates to: PESPFPLITLKTCSLVCPDVQSG*SFFWGL
Trigger: AAGACCCCAGAAGAAGGACAAACCAGACTGCACGTC...AGGACAAACCAGACTGCACGTCTTCAATGTGATAAGAGGGAATGGAGACTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570587.5
ENST00000570852.1
CDS-3UTR CAA 90 bp CATCTGTGGGTTGTGTGCAGTGAGGGGCTGGGAGGAATTTTGTTTGATTGTGGTAGTGGGCCTATAAGATaGGGCAAGTGCTATCTCCAG +
Preference number: 5 (lower is better)
Translates to: HLWVVCSEGLGGILFDCGSGPIR*GKCYLQ
Trigger: CTGGAGATAGCACTTGCCCAATCTTATAGGCCCACT...ACCACAATCAAACAAAATTCCTCCCAGCCCCTCACTGCACACAACCCACAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000570587.5
ENST00000570852.1
CDS-3UTR CAA 90 bp CCATTCCCTCTTATCACATTGAAGACGTGCAGTCTGGTTTGTCCTTCTTCTGGGCAGGGTCTTGCTATGTaGCCCAGACTGTTCTCGAAC +
Preference number: 5 (lower is better)
Translates to: PFPLITLKTCSLVCPSSGQGLAM*PRLFSN
Trigger: GTTCGAGAACAGTCTGGGCAACATAGCAAGACCCTG...CCCAGAAGAAGGACAAACCAGACTGCACGTCTTCAATGTGATAAGAGGGAATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570587.5
CDS GCA 90 bp TCCAAATGGAGCTTAGCTCTTTCACCCCAGTCCTTACTTTCCTGCTaGGTACACTTCGGCGGTGTCAAACAGGTTTACACCATGCTCATA +
Preference number: 5 (lower is better)
Translates to: SKWSLALSPQSLLSC*VHFGGVKQVYTMLI
Trigger: TATGAGCATGGTGTAAACCTGTTTGACACCGCCGAAGTGTACGCAGCAGGAAAGTAAGGACTGGGGTGAAAGAGCTAAGCTCCATTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574006.5
CDS-3UTR CAA 90 bp GAAATTAGACCCAGTGGGCCTATAAGATTGGGCAAGTGCTATCTCCAGAGCAGACTCCAACCTTTGCTCTaGAGGATGTTCCCTAGGGTT +
Preference number: 5 (lower is better)
Translates to: EIRPSGPIRLGKCYLQSRLQPLL*RMFPRV
Trigger: AACCCTAGGGAACATCCTCAAGAGCAAAGGTTGGAG...TCTGCTCTGGAGATAGCACTTGCCCAATCTTATAGGCCCACTGGGTCTAATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570587.5
CDS-3UTR CAA 90 bp CATTATGGACTTAGATTATCAGCCCCCAGCTCCTCTCCTTCCAGACTGAGAAGCATGGTAGATGGCAGGTaGGAAGAGGTAAACCAAGTC +
Preference number: 5 (lower is better)
Translates to: HYGLRLSAPSSSPSRLRSMVDGR*EEVNQV
Trigger: GACTTGGTTTACCTCTTCCAACCTGCCATCTACCAT...GCTTCTCAGTCTGGAAGGAGAGGAGCTGGGGGCTGATAATCTAAGTCCATAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000570587.5
ENST00000570852.1
CDS-3UTR CAA 90 bp TACAGAAGCAGCGGGAAGGGGTGGAGCCTCCATTATGGACTTAGATTATCAGCCTTCCCTCTTATCACATaGAAGACGTGCAGTCTGGTT +
Preference number: 5 (lower is better)
Translates to: YRSSGKGWSLHYGLRLSAFPLIT*KTCSLV
Trigger: AACCAGACTGCACGTCTTCAATGTGATAAGAGGGAA...GGCTGATAATCTAAGTCCATAATGGAGGCTCCACCCCTTCCCGCTGCTTCTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570587.5
ENST00000570852.1
CDS-3UTR CAA 90 bp GAAATTAGACCCAGTGGGCCTATAAGATTGGGCAAGTGCTATCTCCAGAGCAGAAGTGGGCCTATAAGATaGGGCAAGTGCTATCTCCAG +
Preference number: 5 (lower is better)
Translates to: EIRPSGPIRLGKCYLQSRSGPIR*GKCYLQ
Trigger: CTGGAGATAGCACTTGCCCAATCTTATAGGCCCACT...TCTGCTCTGGAGATAGCACTTGCCCAATCTTATAGGCCCACTGGGTCTAATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570587.5
ENST00000570852.1
CDS-3UTR CAA 90 bp TACAGAAGCAGCGGGAAGGGGTGGAGCCTCCATTATGGACTTAGATTATCAGCCAGGAAGTGCTCAGTTTaGAAGGACTGTAAGGTTTGG +
Preference number: 5 (lower is better)
Translates to: YRSSGKGWSLHYGLRLSARKCSV*KDCKVW
Trigger: CCAAACCTTACAGTCCTTCAAAACTGAGCACTTCCT...GGCTGATAATCTAAGTCCATAATGGAGGCTCCACCCCTTCCCGCTGCTTCTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570587.5
CDS-3UTR CAA 90 bp GAAATTAGACCCAGTGGGCCTATAAGATTGGGCAAGTGCTATCTCCAGAGCAGAAGAAGGTCCATGACTTaGGCTTGTTGCTTCTTGCCA +
Preference number: 5 (lower is better)
Translates to: EIRPSGPIRLGKCYLQSRRRSMT*ACCFLP
Trigger: TGGCAAGAAGCAACAAGCCAAAGTCATGGACCTTCT...TCTGCTCTGGAGATAGCACTTGCCCAATCTTATAGGCCCACTGGGTCTAATTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570587.5
CDS-3UTR CAA 90 bp CTGTCCAGAGTCTCCATTCCCTCTTATCACATTGAAGACGTGCAGTCTGGTTTGATGGTAGATGGCAGGTaGGAAGAGGTAAACCAAGTC +
Preference number: 5 (lower is better)
Translates to: LSRVSIPSYHIEDVQSGLMVDGR*EEVNQV
Trigger: GACTTGGTTTACCTCTTCCAACCTGCCATCTACCAT...CAAACCAGACTGCACGTCTTCAATGTGATAAGAGGGAATGGAGACTCTGGACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570587.5
ENST00000570852.1
CDS-3UTR CAA 90 bp CTCCAGAGCAGAGGTCCTAGGAATTTTCTCAAAAGGACAAGTGAACCATATGTGTTCCCTCTTATCACATaGAAGACGTGCAGTCTGGTT +
Preference number: 5 (lower is better)
Translates to: LQSRGPRNFLKRTSEPYVFPLIT*KTCSLV
Trigger: AACCAGACTGCACGTCTTCAATGTGATAAGAGGGAA...CACATATGGTTCACTTGTCCTTTTGAGAAAATTCCTAGGACCTCTGCTCTGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000570587.5
ENST00000570852.1
CDS-3UTR CAA 90 bp AGCAGAGGTCCTAGGAATTTTCTCAAAAGGACAAGTGAACCATATGTGACTGTTTTGGCTTGTTGCTTCTaGCCATCTTCACTCTGCACT +
Preference number: 5 (lower is better)
Translates to: SRGPRNFLKRTSEPYVTVLACCF*PSSLCT
Trigger: AGTGCAGAGTGAAGATGGCAAGAAGCAACAAGCCAA...AACAGTCACATATGGTTCACTTGTCCTTTTGAGAAAATTCCTAGGACCTCTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000570587.5
CDS GCA 72 bp GAGCCGCCAGGCAGGATCGGGCCCGCGGGGGCGGGCTaGTGGAGGTCGCGAGGTTTGCGGCGGGAGGGAAGA +
Preference number: 6 (lower is better)
Translates to: EPPGRIGPAGAG*WRSRGLRREGR
Trigger: TCTTCCCTCCCGCCGCAAACCTCGCGACCTCCAGCAGCCCGCCCCCGCGGGCCCGATCCTGCCTGGCGGCTC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303790.3
ENST00000570852.1
CDS CCA 72 bp CCGCCAGGCAGGATCGGGCCCGCGGGGGCGGGCTGCTaGAGGTCGCGAGGTTTGCGGCGGGAGGGAAGAAAC +
Preference number: 6 (lower is better)
Translates to: PPGRIGPAGAGC*RSRGLRREGRN
Trigger: GTTTCTTCCCTCCCGCCGCAAACCTCGCGACCTCCAGCAGCCCGCCCCCGCGGGCCCGATCCTGCCTGGCGG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303790.3
ENST00000570852.1
CDS GCA 72 bp CGGGGCCCGGCCGGGGTCCACACAGACGGTCCTCACTaGTCCGGCTGCGAAGGTTCTGCTCGGTACACGCGA +
Preference number: 6 (lower is better)
Translates to: RGPAGVHTDGPH*SGCEGSARYTR
Trigger: TCGCGTGTACCGAGCAGAACCTTCGCAGCCGGAGCAGTGAGGACCGTCTGTGTGGACCCCGGCCGGGCCCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303790.3
ENST00000570587.5
ENST00000570852.1
CDS GCA 72 bp CTGCCCGGCCACCCCCATACCTGTATTTCATGCCAGTaGCTCGGCCGGTGCTCTCTCGGAGGGCCCCAGCGG +
Preference number: 6 (lower is better)
Translates to: LPGHPHTCISCQ*LGRCSLGGPQR
Trigger: CCGCTGGGGCCCTCCGAGAGAGCACCGGCCGAGGCACTGGCATGAAATACAGGTATGGGGGTGGCCGGGCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570852.1
CDS GCA 72 bp GGTGGGCTGCCCGGCCACCCCCATACCTGTATTTCATaGCAGTGCCTCGGCCGGTGCTCTCTCGGAGGGCCC +
Preference number: 6 (lower is better)
Translates to: GGLPGHPHTCIS*QCLGRCSLGGP
Trigger: GGGCCCTCCGAGAGAGCACCGGCCGAGGCACTGGCATGAAATACAGGTATGGGGGTGGCCGGGCAGCCCACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570852.1
CDS GCA 72 bp CTAGGTTCCTGTATTTCATGCCAGTGCCTCGGCCGGTaGTCTCTCGGAGGGCCCCAGCGGGCGCTGGGGGTC +
Preference number: 6 (lower is better)
Translates to: LGSCISCQCLGR*SLGGPQRALGV
Trigger: GACCCCCAGCGCCCGCTGGGGCCCTCCGAGAGAGCACCGGCCGAGGCACTGGCATGAAATACAGGAACCTAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303790.3
CDS GCA 72 bp GACCAGACTTCCCTAGGTTCCTGTATTTCATGCCAGTaGCTCGGCCGGTGCTCTCTCGGAGGGCCCCAGCGG +
Preference number: 6 (lower is better)
Translates to: DQTSLGSCISCQ*LGRCSLGGPQR
Trigger: CCGCTGGGGCCCTCCGAGAGAGCACCGGCCGAGGCACTGGCATGAAATACAGGAACCTAGGGAAGTCTGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303790.3
CDS CCA 72 bp GGAGGTCGCGAGGTTTGCGGCGGGAGGGAAGAAACGTaGGGGGCGCCAGGAGTGGAGATATTCAGTTACGGG +
Preference number: 6 (lower is better)
Translates to: GGREVCGGREET*GAPGVEIFSYG
Trigger: CCCGTAACTGAATATCTCCACTCCTGGCGCCCCCCACGTTTCTTCCCTCCCGCCGCAAACCTCGCGACCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303790.3
ENST00000570852.1
CDS GCA 72 bp CACAGACGGTCCTCACTGCTCCGGCTGCGAAGGTTCTaGTCGGTACACGCGATAGACACCTGCATGCTGGCT +
Preference number: 6 (lower is better)
Translates to: HRRSSLLRLRRF*SVHAIDTCMLA
Trigger: AGCCAGCATGCAGGTGTCTATCGCGTGTACCGAGCAGAACCTTCGCAGCCGGAGCAGTGAGGACCGTCTGTG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303790.3
ENST00000570852.1
CDS CCA 72 bp GAGCGATTGGCAAAGACAATGTCCACGTATCCCAGCTaGAGGCGTTCCAGGGATCCTCGCAAGCCCTCAATG +
Preference number: 6 (lower is better)
Translates to: ERLAKTMSTYPS*RRSRDPRKPSM
Trigger: CATTGAGGGCTTGCGAGGATCCCTGGAACGCCTCCAGCTGGGATACGTGGACATTGTCTTTGCCAATCGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303790.3
CDS CAA 90 bp ATGGCTCGCACAATCTCCTCCATAGGACAGTTGGGGTCTGAGCGATaGGCAAAGACAATGTCCACGTATCCCAGCTGGAGGCGTTCCAGG +
Preference number: 6 (lower is better)
Translates to: MARTISSIGQLGSER*AKTMSTYPSWRRSR
Trigger: CCTGGAACGCCTCCAGCTGGGATACGTGGACATTGTCTTTGCCAATCGCTCAGACCCCAACTGTCCTATGGAGGAGATTGTGCGAGCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303790.3
CDS TCA 72 bp GGCTCGCACAATCTCCTCCATAGGACAGTTGGGGTCTaGGCGATTGGCAAAGACAATGTCCACGTATCCCAG +
Preference number: 6 (lower is better)
Translates to: GSHNLLHRTVGV*AIGKDNVHVSQ
Trigger: CTGGGATACGTGGACATTGTCTTTGCCAATCGCTCAGACCCCAACTGTCCTATGGAGGAGATTGTGCGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303790.3
CDS CCA 72 bp ACGGGGGACACAGGAGCAAGGATTAGGAGGGGGAAATaGATGAGGGTAAAGGTCGAGGATGAGGTAAAGGTC +
Preference number: 6 (lower is better)
Translates to: TGDTGARIRRGK*MRVKVEDEVKV
Trigger: GACCTTTACCTCATCCTCGACCTTTACCCTCATCCATTTCCCCCTCCTAATCCTTGCTCCTGTGTCCCCCGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000303790.3
ENST00000570852.1
CDS CAA 72 bp GCTCCTACAGTGCTTTCGGGTCCCTCCGCCAAAAGGTaGGAACTTCACGTTCTCAGAAGTCCCAGGGTTCTT +
Preference number: 6 (lower is better)
Translates to: APTVLSGPSAKR*ELHVLRSPRVL
Trigger: AAGAACCCTGGGACTTCTGAGAACGTGAAGTTCCAACCTTTTGGCGGAGGGACCCGAAAGCACTGTAGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574006.5
CDS CCA 72 bp CTCCTACAGTGCTTTCGGGTCCCTCCGCCAAAAGGTTaGAACTTCACGTTCTCAGAAGTCCCAGGGTTCTTT +
Preference number: 6 (lower is better)
Translates to: LLQCFRVPPPKG*NFTFSEVPGFF
Trigger: AAAGAACCCTGGGACTTCTGAGAACGTGAAGTTCCAACCTTTTGGCGGAGGGACCCGAAAGCACTGTAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574006.5
CDS CAA 72 bp ACAATCTCCTCCATAGGACAGTTGGGGTCTGAGCGATaGGCAAAGACAATGTCCACGTATCCCAGCTGGAGG +
Preference number: 6 (lower is better)
Translates to: TISSIGQLGSER*AKTMSTYPSWR
Trigger: CCTCCAGCTGGGATACGTGGACATTGTCTTTGCCAATCGCTCAGACCCCAACTGTCCTATGGAGGAGATTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303790.3
CDS GCA 72 bp AGCTTAGCTCTTTCACCCCAGTCCTTACTTTCCTGCTaGGTACACTTCGGCGGTGTCAAACAGGTTTACACC +
Preference number: 6 (lower is better)
Translates to: SLALSPQSLLSC*VHFGGVKQVYT
Trigger: GGTGTAAACCTGTTTGACACCGCCGAAGTGTACGCAGCAGGAAAGTAAGGACTGGGGTGAAAGAGCTAAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574006.5
CDS GCA 72 bp TGGAGCTTAGCTCTTTCACCCCAGTCCTTACTTTCCTaGTGCGTACACTTCGGCGGTGTCAAACAGGTTTAC +
Preference number: 6 (lower is better)
Translates to: WSLALSPQSLLS*CVHFGGVKQVY
Trigger: GTAAACCTGTTTGACACCGCCGAAGTGTACGCAGCAGGAAAGTAAGGACTGGGGTGAAAGAGCTAAGCTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574006.5