RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KCNAB1 (Homo sapiens)

Ensembl gene IDs: ENSG00000169282

Ensembl transcript IDs: ENST00000302490.12, ENST00000389634.5, ENST00000389636.9, ENST00000461717.5, ENST00000471742.5, ENST00000472028.5, ENST00000475456.5, ENST00000476362.5, ENST00000477912.5, ENST00000478609.5, ENST00000489036.5, ENST00000490337.6, ENST00000496923.1, ENST00000497291.5, ENST00000618897.4

Found 593 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGAATCCAGGGAGGGACACTAGAGGTTGAGCAGCAAGCTGCTAAGTaGTTCAAAAGACTGGTTAGTAACACCTTTCTGTACTGGGCACAG +
Preference number: 1 (lower is better)
Translates to: RIQGGTLEVEQQAAK*FKRLVSNTFLYWAQ
Trigger: CTGTGCCCAGTACAGAAAGGTGTTACTAACCAGTCTTTTGAATCACTTAGCAGCTTGCTGCTCAACCTCTAGTGTCCCTCCCTGGATTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
3UTR-3UTR GCA 90 bp CCTTCTTTGAGTTACCAAATGCCTGAAGGTAGTACCACACCCCCTGGCCCCCATGTGAGTTTTCAGATGTaGACAGTGGTAGCGACAGCA +
Preference number: 2 (lower is better)
Translates to: PSLSYQMPEGSTTPPGPHVSFQM*TVVATA
Trigger: TGCTGTCGCTACCACTGTGCACATCTGAAAACTCAC...ATGGGGGCCAGGGGGTGTGGTACTACCTTCAGGCATTTGGTAACTCAAAGAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
3UTR-3UTR CCA 90 bp CAGCCTTCTTTGAGTTACCAAATGCCTGAAGGTAGTACCACACCCCCTGGCCCCAACACCTTTCTGTACTaGGCACAGGCCGCTATTTTA +
Preference number: 2 (lower is better)
Translates to: QPSLSYQMPEGSTTPPGPNTFLY*AQAAIL
Trigger: TAAAATAGCGGCCTGTGCCCAGTACAGAAAGGTGTT...GGGGCCAGGGGGTGTGGTACTACCTTCAGGCATTTGGTAACTCAAAGAAGGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
3UTR-3UTR GCA 90 bp CTGAAGGTAGTACCACACCCCCTGGCCCCCATATTCTTCCCATTGCATAAGCATGTGAGTTTTCAGATGTaGACAGTGGTAGCGACAGCA +
Preference number: 2 (lower is better)
Translates to: LKVVPHPLAPIFFPLHKHVSFQM*TVVATA
Trigger: TGCTGTCGCTACCACTGTGCACATCTGAAAACTCAC...ATGCTTATGCAATGGGAAGAATATGGGGGCCAGGGGGTGTGGTACTACCTTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
3UTR-3UTR CCA 90 bp CCTTCTTTGAGTTACCAAATGCCTGAAGGTAGTACCACACCCCCTGGCCCCCATAACACCTTTCTGTACTaGGCACAGGCCGCTATTTTA +
Preference number: 2 (lower is better)
Translates to: PSLSYQMPEGSTTPPGPHNTFLY*AQAAIL
Trigger: TAAAATAGCGGCCTGTGCCCAGTACAGAAAGGTGTT...ATGGGGGCCAGGGGGTGTGGTACTACCTTCAGGCATTTGGTAACTCAAAGAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
3UTR-3UTR TCA 90 bp CCTTCTTTGAGTTACCAAATGCCTGAAGGTAGTACCACACCCCCTGGCCCCCATCAGCAAGCTGCTAAGTaGTTCAAAAGACTGGTTAGT +
Preference number: 2 (lower is better)
Translates to: PSLSYQMPEGSTTPPGPHQQAAK*FKRLVS
Trigger: ACTAACCAGTCTTTTGAATCACTTAGCAGCTTGCTG...ATGGGGGCCAGGGGGTGTGGTACTACCTTCAGGCATTTGGTAACTCAAAGAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
3UTR-3UTR TCA 90 bp CCTTCTTTGAGTTACCAAATGCCTGAAGGTAGTACCACACCCCCTGGCCCCCATCAATGCAAGAATAGGTaGCTCCAGTCCAAGATAAGA +
Preference number: 2 (lower is better)
Translates to: PSLSYQMPEGSTTPPGPHQCKNR*LQSKIR
Trigger: TCTTATCTTGGACTGGAGTCACCTATTCTTGCATTG...ATGGGGGCCAGGGGGTGTGGTACTACCTTCAGGCATTTGGTAACTCAAAGAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
3UTR-3UTR GCA 90 bp TACCACACCCCCTGGCCCCCATATTCTTCCCATTGCATAAGCATGAGGTGTATAGTGAGTTTTCAGATGTaGACAGTGGTAGCGACAGCA +
Preference number: 2 (lower is better)
Translates to: YHTPWPPYSSHCISMRCIVSFQM*TVVATA
Trigger: TGCTGTCGCTACCACTGTGCACATCTGAAAACTCAC...TATACACCTCATGCTTATGCAATGGGAAGAATATGGGGGCCAGGGGGTGTGGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
3UTR-3UTR CCA 90 bp CTGAAGGTAGTACCACACCCCCTGGCCCCCATATTCTTCCCATTGCATAAGCATAACACCTTTCTGTACTaGGCACAGGCCGCTATTTTA +
Preference number: 2 (lower is better)
Translates to: LKVVPHPLAPIFFPLHKHNTFLY*AQAAIL
Trigger: TAAAATAGCGGCCTGTGCCCAGTACAGAAAGGTGTT...ATGCTTATGCAATGGGAAGAATATGGGGGCCAGGGGGTGTGGTACTACCTTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
3UTR-3UTR CCA 90 bp CTCGGACAATTTCTTCCATGGGAGTGTTACTGTCCGGTCGATTTGCAAAGACCACACTTTCATAGGCGATaGTCATCAGCCGTTCAGCAA +
Preference number: 2 (lower is better)
Translates to: LGQFLPWECYCPVDLQRPHFHRR*SSAVQQ
Trigger: TTGCTGAACGGCTGATGACCATCGCCTATGAAAGTG...TGGTCTTTGCAAATCGACCGGACAGTAACACTCCCATGGAAGAAATTGTCCGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489036.5
3UTR-3UTR TCA 90 bp TACCACACCCCCTGGCCCCCATATTCTTCCCATTGCATAAGCATGAGGTGTATACAGCAAGCTGCTAAGTaGTTCAAAAGACTGGTTAGT +
Preference number: 2 (lower is better)
Translates to: YHTPWPPYSSHCISMRCIQQAAK*FKRLVS
Trigger: ACTAACCAGTCTTTTGAATCACTTAGCAGCTTGCTG...TATACACCTCATGCTTATGCAATGGGAAGAATATGGGGGCCAGGGGGTGTGGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
3UTR-3UTR TCA 90 bp TCTTTGAGTTACCAAATGCCTGAAGGTAGTACCACACCCCCTGGCCCCCATATTGGATTTTCTTGGTTGTaGGTTTTCAGATGTGCACAG +
Preference number: 2 (lower is better)
Translates to: SLSYQMPEGSTTPPGPHIGFSWL*VFRCAQ
Trigger: CTGTGCACATCTGAAAACTCACAACCAAGAAAATCC...AATATGGGGGCCAGGGGGTGTGGTACTACCTTCAGGCATTTGGTAACTCAAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
3UTR-3UTR GCA 90 bp ACACCTCAGATTTCGAGTGCAACAAGGGTAAGCCCCATTAATCCATGCAAAGAAGTGAGTTTTCAGATGTaGACAGTGGTAGCGACAGCA +
Preference number: 2 (lower is better)
Translates to: TPQISSATRVSPINPCKEVSFQM*TVVATA
Trigger: TGCTGTCGCTACCACTGTGCACATCTGAAAACTCAC...TTCTTTGCATGGATTAATGGGGCTTACCCTTGTTGCACTCGAAATCTGAGGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302490.12
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
3UTR-3UTR CCA 90 bp GTTGTGAGTTTTCAGATGTGCACAGTGGTAGCGACAGCAGACACCTCAAAGAATAACACCTTTCTGTACTaGGCACAGGCCGCTATTTTA +
Preference number: 2 (lower is better)
Translates to: VVSFQMCTVVATADTSKNNTFLY*AQAAIL
Trigger: TAAAATAGCGGCCTGTGCCCAGTACAGAAAGGTGTT...ATTCTTTGAGGTGTCTGCTGTCGCTACCACTGTGCACATCTGAAAACTCACAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
3UTR-3UTR CCA 90 bp ATCACATTTCCCATTAGACAGCACCTCAGCTCCTCTATACATACAGCAGTTCGCGTACAAGGCCATTCTTaGGGCCAAGCAACAGTAAAT +
Preference number: 2 (lower is better)
Translates to: ITFPIRQHLSSSIHTAVRVQGHS*GQATVN
Trigger: ATTTACTGTTGCTTGGCCCCAAGAATGGCCTTGTAC...GCGAACTGCTGTATGTATAGAGGAGCTGAGGTGCTGTCTAATGGGAAATGTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302490.12
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
3UTR-3UTR TCA 90 bp GTTGTGAGTTTTCAGATGTGCACAGTGGTAGCGACAGCAGACACCTCAAAGAATCAGCAAGCTGCTAAGTaGTTCAAAAGACTGGTTAGT +
Preference number: 2 (lower is better)
Translates to: VVSFQMCTVVATADTSKNQQAAK*FKRLVS
Trigger: ACTAACCAGTCTTTTGAATCACTTAGCAGCTTGCTG...ATTCTTTGAGGTGTCTGCTGTCGCTACCACTGTGCACATCTGAAAACTCACAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
3UTR-3UTR TCA 90 bp ATCACATTTCCCATTAGACAGCACCTCAGCTCCTCTATACATACAGCAGTTCGCCAGCAAGCTGCTAAGTaGTTCAAAAGACTGGTTAGT +
Preference number: 2 (lower is better)
Translates to: ITFPIRQHLSSSIHTAVRQQAAK*FKRLVS
Trigger: ACTAACCAGTCTTTTGAATCACTTAGCAGCTTGCTG...GCGAACTGCTGTATGTATAGAGGAGCTGAGGTGCTGTCTAATGGGAAATGTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302490.12
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
3UTR-3UTR TCA 90 bp CTGGCCCCCATATTCTTCCCATTGCATAAGCATGAGGTGTATACAGCAATGCAAGGATTTTCTTGGTTGTaGGTTTTCAGATGTGCACAG +
Preference number: 2 (lower is better)
Translates to: LAPIFFPLHKHEVYTAMQGFSWL*VFRCAQ
Trigger: CTGTGCACATCTGAAAACTCACAACCAAGAAAATCC...TTGCATTGCTGTATACACCTCATGCTTATGCAATGGGAAGAATATGGGGGCCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
3UTR-3UTR TCA 90 bp ACACCTCAGATTTCGAGTGCAACAAGGGTAAGCCCCATTAATCCATGCAAAGAACAGCAAGCTGCTAAGTaGTTCAAAAGACTGGTTAGT +
Preference number: 2 (lower is better)
Translates to: TPQISSATRVSPINPCKEQQAAK*FKRLVS
Trigger: ACTAACCAGTCTTTTGAATCACTTAGCAGCTTGCTG...TTCTTTGCATGGATTAATGGGGCTTACCCTTGTTGCACTCGAAATCTGAGGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302490.12
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
3UTR-3UTR TCA 90 bp ATCACATTTCCCATTAGACAGCACCTCAGCTCCTCTATACATACAGCAGTTCGCTCCAAGCAAGACTTTTaGGTGAAGATACTGCTTTTT +
Preference number: 2 (lower is better)
Translates to: ITFPIRQHLSSSIHTAVRSKQDF*VKILLF
Trigger: AAAAAGCAGTATCTTCACTCAAAAGTCTTGCTTGGA...GCGAACTGCTGTATGTATAGAGGAGCTGAGGTGCTGTCTAATGGGAAATGTGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302490.12
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
3UTR-3UTR GCA 90 bp ACACCTCAGATTTCGAGTGCAACAAGGGTAAGCCCCATTAATCCATGCAAAGAAAACTTGCAGAAGTTGTaGCTACAAGCAGTTGAAAGT +
Preference number: 2 (lower is better)
Translates to: TPQISSATRVSPINPCKENLQKL*LQAVES
Trigger: ACTTTCAACTGCTTGTAGGCACAACTTCTGCAAGTT...TTCTTTGCATGGATTAATGGGGCTTACCCTTGTTGCACTCGAAATCTGAGGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302490.12
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
3UTR-3UTR TCA 90 bp AGTTGTACAAGGCCATTCTTGGGGCCAAGCAACAGTAAATATTTGAAAGGTAATCTGTACAGCCTTCTTTaGGTTACCAAATGCCTGAAG +
Preference number: 2 (lower is better)
Translates to: SCTRPFLGPSNSKYLKGNLYSLL*VTKCLK
Trigger: CTTCAGGCATTTGGTAACTCAAAGAAGGCTGTACAG...ATTACCTTTCAAATATTTACTGTTGCTTGGCCCCAAGAATGGCCTTGTACAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302490.12
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
3UTR-3UTR TCA 90 bp ACACCTCAGATTTCGAGTGCAACAAGGGTAAGCCCCATTAATCCATGCAAAGAATCCAAGCAAGACTTTTaGGTGAAGATACTGCTTTTT +
Preference number: 2 (lower is better)
Translates to: TPQISSATRVSPINPCKESKQDF*VKILLF
Trigger: AAAAAGCAGTATCTTCACTCAAAAGTCTTGCTTGGA...TTCTTTGCATGGATTAATGGGGCTTACCCTTGTTGCACTCGAAATCTGAGGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302490.12
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
3UTR-3UTR CCA 90 bp ACACCTCAGATTTCGAGTGCAACAAGGGTAAGCCCCATTAATCCATGCAAAGAAGAACATTTGCCTTCCTaGGTATTTTACAGGTTTACT +
Preference number: 2 (lower is better)
Translates to: TPQISSATRVSPINPCKEEHLPS*VFYRFT
Trigger: AGTAAACCTGTAAAATACCCAGGAAGGCAAATGTTC...TTCTTTGCATGGATTAATGGGGCTTACCCTTGTTGCACTCGAAATCTGAGGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302490.12
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
3UTR-3UTR TCA 90 bp AGTTGTACAAGGCCATTCTTGGGGCCAAGCAACAGTAAATATTTGAAAGGTAATGGATTTTCTTGGTTGTaGGTTTTCAGATGTGCACAG +
Preference number: 2 (lower is better)
Translates to: SCTRPFLGPSNSKYLKGNGFSWL*VFRCAQ
Trigger: CTGTGCACATCTGAAAACTCACAACCAAGAAAATCC...ATTACCTTTCAAATATTTACTGTTGCTTGGCCCCAAGAATGGCCTTGTACAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000302490.12
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
3UTR-3UTR TCA 90 bp AGTGGACATAACATTAGAATCCTAATAGACATTCTGGATAAGTTGTACAAGGCCCAATGCAAGAATAGGTaGCTCCAGTCCAAGATAAGA +
Preference number: 2 (lower is better)
Translates to: SGHNIRILIDILDKLYKAQCKNR*LQSKIR
Trigger: TCTTATCTTGGACTGGAGTCACCTATTCTTGCATTG...GGCCTTGTACAACTTATCCAGAATGTCTATTAGGATTCTAATGTTATGTCCACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302490.12
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
3UTR-3UTR CCA 90 bp AGTGGACATAACATTAGAATCCTAATAGACATTCTGGATAAGTTGTACAAGGCCAGTGATTCAAAAGACTaGTTAGTAACACCTTTCTGT +
Preference number: 2 (lower is better)
Translates to: SGHNIRILIDILDKLYKASDSKD*LVTPFC
Trigger: ACAGAAAGGTGTTACTAACCAGTCTTTTGAATCACT...GGCCTTGTACAACTTATCCAGAATGTCTATTAGGATTCTAATGTTATGTCCACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302490.12
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
3UTR TCA 72 bp GGAGGGACACTAGAGGTTGAGCAGCAAGCTGCTAAGTaGTTCAAAAGACTGGTTAGTAACACCTTTCTGTAC +
Preference number: 3 (lower is better)
Translates to: GGTLEVEQQAAK*FKRLVSNTFLY
Trigger: GTACAGAAAGGTGTTACTAACCAGTCTTTTGAATCACTTAGCAGCTTGCTGCTCAACCTCTAGTGTCCCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
3UTR-3UTR CAA 90 bp ACACCTCAGATTTCGAGTGCAACAAGGGTAAGCCCCATTAATCCATGCAAAGAACCCATATTCTTCCCATaGCATAAGCATGAGGTGTAT +
Preference number: 3 (lower is better)
Translates to: TPQISSATRVSPINPCKEPIFFP*HKHEVY
Trigger: ATACACCTCATGCTTATGCAATGGGAAGAATATGGG...TTCTTTGCATGGATTAATGGGGCTTACCCTTGTTGCACTCGAAATCTGAGGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302490.12
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
3UTR-3UTR CAA 90 bp ACACCTCAGATTTCGAGTGCAACAAGGGTAAGCCCCATTAATCCATGCAAAGAATCTGTACAGCCTTCTTaGAGTTACCAAATGCCTGAA +
Preference number: 3 (lower is better)
Translates to: TPQISSATRVSPINPCKESVQPS*SYQMPE
Trigger: TTCAGGCATTTGGTAACTCAAAGAAGGCTGTACAGA...TTCTTTGCATGGATTAATGGGGCTTACCCTTGTTGCACTCGAAATCTGAGGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302490.12
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
3UTR-3UTR CAA 90 bp ACACCTCAGATTTCGAGTGCAACAAGGGTAAGCCCCATTAATCCATGCAAAGAATTCCAAGCAAGACTTTaGAGTGAAGATACTGCTTTT +
Preference number: 3 (lower is better)
Translates to: TPQISSATRVSPINPCKEFQARL*SEDTAF
Trigger: AAAAGCAGTATCTTCACTCAAAAGTCTTGCTTGGAA...TTCTTTGCATGGATTAATGGGGCTTACCCTTGTTGCACTCGAAATCTGAGGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302490.12
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
3UTR-3UTR CAA 90 bp AGTTGTACAAGGCCATTCTTGGGGCCAAGCAACAGTAAATATTTGAAAGGTAATCCCATATTCTTCCCATaGCATAAGCATGAGGTGTAT +
Preference number: 3 (lower is better)
Translates to: SCTRPFLGPSNSKYLKGNPIFFP*HKHEVY
Trigger: ATACACCTCATGCTTATGCAATGGGAAGAATATGGG...ATTACCTTTCAAATATTTACTGTTGCTTGGCCCCAAGAATGGCCTTGTACAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302490.12
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
3UTR-3UTR CAA 90 bp AGTTGTACAAGGCCATTCTTGGGGCCAAGCAACAGTAAATATTTGAAAGGTAATCTTACGCAACTCACATaGCATCTGTGGATTTTGTTC +
Preference number: 3 (lower is better)
Translates to: SCTRPFLGPSNSKYLKGNLTQLT*HLWILF
Trigger: GAACAAAATCCACAGATGCAATGTGAGTTGCGTAAG...ATTACCTTTCAAATATTTACTGTTGCTTGGCCCCAAGAATGGCCTTGTACAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302490.12
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
3UTR-3UTR CAA 90 bp AGTGGACATAACATTAGAATCCTAATAGACATTCTGGATAAGTTGTACAAGGCCCTTACGCAACTCACATaGCATCTGTGGATTTTGTTC +
Preference number: 3 (lower is better)
Translates to: SGHNIRILIDILDKLYKALTQLT*HLWILF
Trigger: GAACAAAATCCACAGATGCAATGTGAGTTGCGTAAG...GGCCTTGTACAACTTATCCAGAATGTCTATTAGGATTCTAATGTTATGTCCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302490.12
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
3UTR TCA 72 bp CCTCAGCTCCTCTATACATACAGCAGTTCGCTGGATTaGATACACAATGAACAACTGAAAATGATCAATTTC +
Preference number: 3 (lower is better)
Translates to: PQLLYTYSSSLD*IHNEQLKMINF
Trigger: GAAATTGATCATTTTCAGTTGTTCATTGTGTATTCAATCCAGCGAACTGCTGTATGTATAGAGGAGCTGAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302490.12
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR GCA 90 bp CAGCCTTCTTTGAGTTACCAAATGCCTGAAGGTAGTACCACACCCCCTGGCCCCGGACCACAGGCAGGATaGTCAACTGGCGCGCGGAGC +
Preference number: 4 (lower is better)
Translates to: QPSLSYQMPEGSTTPPGPGPQAG*STGARS
Trigger: GCTCCGCGCGCCAGTTGAGCATCCTGCCTGTGGTCC...GGGGCCAGGGGGTGTGGTACTACCTTCAGGCATTTGGTAACTCAAAGAAGGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS-3UTR GCA 90 bp CCTTCTTTGAGTTACCAAATGCCTGAAGGTAGTACCACACCCCCTGGCCCCCATGATCTGACTCCCCGCTaGCCCTGTCCGGGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: PSLSYQMPEGSTTPPGPHDLTPR*PCPGCQ
Trigger: CTGGCAGCCCGGACAGGGGCAGCGGGGAGTCAGATC...ATGGGGGCCAGGGGGTGTGGTACTACCTTCAGGCATTTGGTAACTCAAAGAAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000389636.9
ENST00000490337.6
CDS-3UTR GCA 90 bp CAGACACCTCAAAGAATCCAGGGAGGGACACTAGAGGTTGAGCAGCAAGCTGCTGCGGCATGCCTGTGGTaGAGACGGTGGTGTGCTCGC +
Preference number: 4 (lower is better)
Translates to: QTPQRIQGGTLEVEQQAAAACLW*RRWCAR
Trigger: GCGAGCACACCACCGTCTGCACCACAGGCATGCCGC...AGCAGCTTGCTGCTCAACCTCTAGTGTCCCTCCCTGGATTCTTTGAGGTGTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389636.9
ENST00000490337.6
CDS-3UTR GCA 90 bp CCTTCTTTGAGTTACCAAATGCCTGAAGGTAGTACCACACCCCCTGGCCCCCATGCGGCATGCCTGTGGTaGAGACGGTGGTGTGCTCGC +
Preference number: 4 (lower is better)
Translates to: PSLSYQMPEGSTTPPGPHAACLW*RRWCAR
Trigger: GCGAGCACACCACCGTCTGCACCACAGGCATGCCGC...ATGGGGGCCAGGGGGTGTGGTACTACCTTCAGGCATTTGGTAACTCAAAGAAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000389636.9
ENST00000490337.6
CDS-3UTR GCA 90 bp CAGCCTTCTTTGAGTTACCAAATGCCTGAAGGTAGTACCACACCCCCTGGCCCCTGGGCCTCACAGGTTTaGAGGCCGCCTGAGGCTGAG +
Preference number: 4 (lower is better)
Translates to: QPSLSYQMPEGSTTPPGPWASQV*RPPEAE
Trigger: CTCAGCCTCAGGCGGCCTGCAAACCTGTGAGGCCCA...GGGGCCAGGGGGTGTGGTACTACCTTCAGGCATTTGGTAACTCAAAGAAGGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471742.5
CDS-3UTR CCA 90 bp CAGACACCTCAAAGAATCCAGGGAGGGACACTAGAGGTTGAGCAGCAAGCTGCTCGGGTCCCCTCGGACTaGTGGTCTCCATCCACTCCG +
Preference number: 4 (lower is better)
Translates to: QTPQRIQGGTLEVEQQAARVPSD*WSPSTP
Trigger: CGGAGTGGATGGAGACCACCAGTCCGAGGGGACCCG...AGCAGCTTGCTGCTCAACCTCTAGTGTCCCTCCCTGGATTCTTTGAGGTGTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS-3UTR CCA 90 bp CAGACACCTCAAAGAATCCAGGGAGGGACACTAGAGGTTGAGCAGCAAGCTGCTGCCGCCAGCATCCCCTaGACCACAGGCAGGATGCTC +
Preference number: 4 (lower is better)
Translates to: QTPQRIQGGTLEVEQQAAAASIP*TTGRML
Trigger: GAGCATCCTGCCTGTGGTCCAGGGGATGCTGGCGGC...AGCAGCTTGCTGCTCAACCTCTAGTGTCCCTCCCTGGATTCTTTGAGGTGTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS-3UTR CCA 90 bp CAGCCTTCTTTGAGTTACCAAATGCCTGAAGGTAGTACCACACCCCCTGGCCCCCGACCGTGCGGAATTTaGCCCGGGCTGCGTTCACCA +
Preference number: 4 (lower is better)
Translates to: QPSLSYQMPEGSTTPPGPRPCGI*PGLRSP
Trigger: TGGTGAACGCAGCCCGGGCCAAATTCCGCACGGTCG...GGGGCCAGGGGGTGTGGTACTACCTTCAGGCATTTGGTAACTCAAAGAAGGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS-3UTR TCA 90 bp TCTTTGAGTTACCAAATGCCTGAAGGTAGTACCACACCCCCTGGCCCCCATATTCCGGTCCGCGGTGTCTaGATGCGGGCTCGCTTCTGG +
Preference number: 4 (lower is better)
Translates to: SLSYQMPEGSTTPPGPHIPVRGV*MRARFW
Trigger: CCAGAAGCGAGCCCGCATTCAGACACCGCGGACCGG...AATATGGGGGCCAGGGGGTGTGGTACTACCTTCAGGCATTTGGTAACTCAAAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS-3UTR TCA 90 bp AACACCTTTCTGTACTGGGCACAGGCCGCTATTTTAACCATGCAGCTTCTGTGGCCGGTCCGCGGTGTCTaGATGCGGGCTCGCTTCTGG +
Preference number: 4 (lower is better)
Translates to: NTFLYWAQAAILTMQLLWPVRGV*MRARFW
Trigger: CCAGAAGCGAGCCCGCATTCAGACACCGCGGACCGG...CCACAGAAGCTGCATGGTTAAAATAGCGGCCTGTGCCCAGTACAGAAAGGTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS-3UTR TCA 90 bp CTGAAGGTAGTACCACACCCCCTGGCCCCCATATTCTTCCCATTGCATAAGCATCCAGTTGACGCGCCCTaGGCTGGCTTTCCCCTGAGG +
Preference number: 4 (lower is better)
Translates to: LKVVPHPLAPIFFPLHKHPVDAP*AGFPLR
Trigger: CCTCAGGGGAAAGCCAGCTCAGGGCGCGTCAACTGG...ATGCTTATGCAATGGGAAGAATATGGGGGCCAGGGGGTGTGGTACTACCTTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000389636.9
ENST00000490337.6
CDS-3UTR GCA 90 bp CCTTCTTTGAGTTACCAAATGCCTGAAGGTAGTACCACACCCCCTGGCCCCCATGCACCGACACGGGTTTaGAGCTGCACGGAGGAGCAG +
Preference number: 4 (lower is better)
Translates to: PSLSYQMPEGSTTPPGPHAPTRV*SCTEEQ
Trigger: CTGCTCCTCCGTGCAGCTGCAAACCCGTGTCGGTGC...ATGGGGGCCAGGGGGTGTGGTACTACCTTCAGGCATTTGGTAACTCAAAGAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS-3UTR GCA 90 bp CCTTCTTTGAGTTACCAAATGCCTGAAGGTAGTACCACACCCCCTGGCCCCCATTCCGCGGTGTCTGAATaGGGGCTCGCTTCTGGGCGA +
Preference number: 4 (lower is better)
Translates to: PSLSYQMPEGSTTPPGPHSAVSE*GLASGR
Trigger: TCGCCCAGAAGCGAGCCCGCATTCAGACACCGCGGA...ATGGGGGCCAGGGGGTGTGGTACTACCTTCAGGCATTTGGTAACTCAAAGAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS-3UTR GCA 90 bp CAGACACCTCAAAGAATCCAGGGAGGGACACTAGAGGTTGAGCAGCAAGCTGCTGTGCAGACGGTGGTGTaGTCGCTGGACAGGTCGCAG +
Preference number: 4 (lower is better)
Translates to: QTPQRIQGGTLEVEQQAAVQTVV*SLDRSQ
Trigger: CTGCGACCTGTCCAGCGAGCACACCACCGTCTGCAC...AGCAGCTTGCTGCTCAACCTCTAGTGTCCCTCCCTGGATTCTTTGAGGTGTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389636.9
ENST00000490337.6
CDS-3UTR CCA 90 bp CAGCCTTCTTTGAGTTACCAAATGCCTGAAGGTAGTACCACACCCCCTGGCCCCTGTGCGGCATGCCTGTaGTGCAGACGGTGGTGTGCT +
Preference number: 4 (lower is better)
Translates to: QPSLSYQMPEGSTTPPGPCAACL*CRRWCA
Trigger: AGCACACCACCGTCTGCACCACAGGCATGCCGCACA...GGGGCCAGGGGGTGTGGTACTACCTTCAGGCATTTGGTAACTCAAAGAAGGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389636.9
ENST00000490337.6
CDS-3UTR TCA 90 bp TACTGGGCACAGGCCGCTATTTTAACCATGCAGCTTCTGTGGTTCATGCATTGCCCAGTTGACGCGCCCTaGGCTGGCTTTCCCCTGAGG +
Preference number: 4 (lower is better)
Translates to: YWAQAAILTMQLLWFMHCPVDAP*AGFPLR
Trigger: CCTCAGGGGAAAGCCAGCTCAGGGCGCGTCAACTGG...GCAATGCATGAACCACAGAAGCTGCATGGTTAAAATAGCGGCCTGTGCCCAGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389636.9
ENST00000490337.6
CDS-3UTR GCA 90 bp TCTTTGAGTTACCAAATGCCTGAAGGTAGTACCACACCCCCTGGCCCCCATATTGGACCACAGGCAGGATaGTCAACTGGCGCGCGGAGC +
Preference number: 4 (lower is better)
Translates to: SLSYQMPEGSTTPPGPHIGPQAG*STGARS
Trigger: GCTCCGCGCGCCAGTTGAGCATCCTGCCTGTGGTCC...AATATGGGGGCCAGGGGGTGTGGTACTACCTTCAGGCATTTGGTAACTCAAAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS-3UTR GCA 90 bp CAGCCTTCTTTGAGTTACCAAATGCCTGAAGGTAGTACCACACCCCCTGGCCCCAGCATTCATGGTGACTaGACGCAGCCCTTCGCGGAG +
Preference number: 4 (lower is better)
Translates to: QPSLSYQMPEGSTTPPGPSIHGD*TQPFAE
Trigger: CTCCGCGAAGGGCTGCGTGCAGTCACCATGAATGCT...GGGGCCAGGGGGTGTGGTACTACCTTCAGGCATTTGGTAACTCAAAGAAGGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS-3UTR GCA 90 bp AACACCTTTCTGTACTGGGCACAGGCCGCTATTTTAACCATGCAGCTTCTGTGGCCCCCTTCCTGGGGATaGCGTCAGAGGAGTCCTGGC +
Preference number: 4 (lower is better)
Translates to: NTFLYWAQAAILTMQLLWPPSWG*RQRSPG
Trigger: GCCAGGACTCCTCTGACGGCATCCCCAGGAAGGGGG...CCACAGAAGCTGCATGGTTAAAATAGCGGCCTGTGCCCAGTACAGAAAGGTGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS-3UTR GCA 90 bp CAGACACCTCAAAGAATCCAGGGAGGGACACTAGAGGTTGAGCAGCAAGCTGCTGAATTTGGCCCGGGCTaGGTTCACCACATTGGGGGC +
Preference number: 4 (lower is better)
Translates to: QTPQRIQGGTLEVEQQAAEFGPG*VHHIGG
Trigger: GCCCCCAATGTGGTGAACGCAGCCCGGGCCAAATTC...AGCAGCTTGCTGCTCAACCTCTAGTGTCCCTCCCTGGATTCTTTGAGGTGTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS-3UTR GCA 90 bp CTGAAGGTAGTACCACACCCCCTGGCCCCCATATTCTTCCCATTGCATAAGCATGTGCAGACGGTGGTGTaGTCGCTGGACAGGTCGCAG +
Preference number: 4 (lower is better)
Translates to: LKVVPHPLAPIFFPLHKHVQTVV*SLDRSQ
Trigger: CTGCGACCTGTCCAGCGAGCACACCACCGTCTGCAC...ATGCTTATGCAATGGGAAGAATATGGGGGCCAGGGGGTGTGGTACTACCTTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000389636.9
ENST00000490337.6
CDS-3UTR CCA 90 bp AACACCTTTCTGTACTGGGCACAGGCCGCTATTTTAACCATGCAGCTTCTGTGGCGGGTCCCCTCGGACTaGTGGTCTCCATCCACTCCG +
Preference number: 4 (lower is better)
Translates to: NTFLYWAQAAILTMQLLWRVPSD*WSPSTP
Trigger: CGGAGTGGATGGAGACCACCAGTCCGAGGGGACCCG...CCACAGAAGCTGCATGGTTAAAATAGCGGCCTGTGCCCAGTACAGAAAGGTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS-3UTR CCA 90 bp TACTGGGCACAGGCCGCTATTTTAACCATGCAGCTTCTGTGGTTCATGCATTGCGCCGCCAGCATCCCCTaGACCACAGGCAGGATGCTC +
Preference number: 4 (lower is better)
Translates to: YWAQAAILTMQLLWFMHCAASIP*TTGRML
Trigger: GAGCATCCTGCCTGTGGTCCAGGGGATGCTGGCGGC...GCAATGCATGAACCACAGAAGCTGCATGGTTAAAATAGCGGCCTGTGCCCAGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS-3UTR TCA 90 bp ATGGCTCGGACAATTTCTTCCATGGGAGTGTTACTGTCCGGTCGATTTGCAAAGTGTGATGCTGAGGCGTaGACGTCCCCAGGCTGCGCG +
Preference number: 4 (lower is better)
Translates to: MARTISSMGVLLSGRFAKCDAEA*TSPGCA
Trigger: CGCGCAGCCTGGGGACGTTCACGCCTCAGCATCACA...CTTTGCAAATCGACCGGACAGTAACACTCCCATGGAAGAAATTGTCCGAGCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489036.5
CDS-3UTR TCA 90 bp CCTTCTTTGAGTTACCAAATGCCTGAAGGTAGTACCACACCCCCTGGCCCCCATCTTGGTGTTCTCCTCTaGGATCTGACTCCCCGCTGC +
Preference number: 4 (lower is better)
Translates to: PSLSYQMPEGSTTPPGPHLGVLL*DLTPRC
Trigger: GCAGCGGGGAGTCAGATCTCAGAGGAGAACACCAAG...ATGGGGGCCAGGGGGTGTGGTACTACCTTCAGGCATTTGGTAACTCAAAGAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000389636.9
ENST00000490337.6
CDS-3UTR GCA 90 bp TACCACACCCCCTGGCCCCCATATTCTTCCCATTGCATAAGCATGAGGTGTATAGCACCGACACGGGTTTaGAGCTGCACGGAGGAGCAG +
Preference number: 4 (lower is better)
Translates to: YHTPWPPYSSHCISMRCIAPTRV*SCTEEQ
Trigger: CTGCTCCTCCGTGCAGCTGCAAACCCGTGTCGGTGC...TATACACCTCATGCTTATGCAATGGGAAGAATATGGGGGCCAGGGGGTGTGGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS-3UTR GCA 90 bp TCTTTGAGTTACCAAATGCCTGAAGGTAGTACCACACCCCCTGGCCCCCATATTGGGGCGGTGGAGCTCTaGTTGCTCAGAAGTCGGTCC +
Preference number: 4 (lower is better)
Translates to: SLSYQMPEGSTTPPGPHIGAVEL*LLRSRS
Trigger: GGACCGACTTCTGAGCAAGCAGAGCTCCACCGCCCC...AATATGGGGGCCAGGGGGTGTGGTACTACCTTCAGGCATTTGGTAACTCAAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS-3UTR GCA 90 bp CTGAAGGTAGTACCACACCCCCTGGCCCCCATATTCTTCCCATTGCATAAGCATGAATTTGGCCCGGGCTaGGTTCACCACATTGGGGGC +
Preference number: 4 (lower is better)
Translates to: LKVVPHPLAPIFFPLHKHEFGPG*VHHIGG
Trigger: GCCCCCAATGTGGTGAACGCAGCCCGGGCCAAATTC...ATGCTTATGCAATGGGAAGAATATGGGGGCCAGGGGGTGTGGTACTACCTTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS-3UTR GCA 90 bp CAGACACCTCAAAGAATCCAGGGAGGGACACTAGAGGTTGAGCAGCAAGCTGCTCACTCCATCTCGAGGTaGCCCAGTACATCGCCATGC +
Preference number: 4 (lower is better)
Translates to: QTPQRIQGGTLEVEQQAAHSISR*PSTSPC
Trigger: GCATGGCGATGTACTGGGGCACCTCGAGATGGAGTG...AGCAGCTTGCTGCTCAACCTCTAGTGTCCCTCCCTGGATTCTTTGAGGTGTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR GCA 90 bp CAGCCTTCTTTGAGTTACCAAATGCCTGAAGGTAGTACCACACCCCCTGGCCCCTGCCATGCCCGTCTCTaGTCTGGTGGTTTCCTGCAA +
Preference number: 4 (lower is better)
Translates to: QPSLSYQMPEGSTTPPGPCHARL*SGGFLQ
Trigger: TTGCAGGAAACCACCAGAGCAGAGACGGGCATGGCA...GGGGCCAGGGGGTGTGGTACTACCTTCAGGCATTTGGTAACTCAAAGAAGGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471742.5
CDS-3UTR CCA 90 bp CTGAAGGTAGTACCACACCCCCTGGCCCCCATATTCTTCCCATTGCATAAGCATTCTCGAGCGAAAGCCTaGGTTGCTGAGCCTGCACCG +
Preference number: 4 (lower is better)
Translates to: LKVVPHPLAPIFFPLHKHSRAKA*VAEPAP
Trigger: CGGTGCAGGCTCAGCAACCCAGGCTTTCGCTCGAGA...ATGCTTATGCAATGGGAAGAATATGGGGGCCAGGGGGTGTGGTACTACCTTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS-3UTR CCA 90 bp GTTGTGAGTTTTCAGATGTGCACAGTGGTAGCGACAGCAGACACCTCAAAGAATCGCTCCGGGAGGACGTaGGGGCTCCTCAAGACCCCT +
Preference number: 4 (lower is better)
Translates to: VVSFQMCTVVATADTSKNRSGRT*GLLKTP
Trigger: AGGGGTCTTGAGGAGCCCCCACGTCCTCCCGGAGCG...ATTCTTTGAGGTGTCTGCTGTCGCTACCACTGTGCACATCTGAAAACTCACAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS-3UTR CCA 90 bp TACCACACCCCCTGGCCCCCATATTCTTCCCATTGCATAAGCATGAGGTGTATAGGCAGGATGCTCAACTaGCGCGCGGAGCATCCCAAG +
Preference number: 4 (lower is better)
Translates to: YHTPWPPYSSHCISMRCIGRMLN*RAEHPK
Trigger: CTTGGGATGCTCCGCGCGCCAGTTGAGCATCCTGCC...TATACACCTCATGCTTATGCAATGGGAAGAATATGGGGGCCAGGGGGTGTGGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS-3UTR CCA 90 bp CCTTCTTTGAGTTACCAAATGCCTGAAGGTAGTACCACACCCCCTGGCCCCCATCCACATTGGGGGCGGTaGAGCTCTGCTTGCTCAGAA +
Preference number: 4 (lower is better)
Translates to: PSLSYQMPEGSTTPPGPHPHWGR*SSACSE
Trigger: TTCTGAGCAAGCAGAGCTCCACCGCCCCCAATGTGG...ATGGGGGCCAGGGGGTGTGGTACTACCTTCAGGCATTTGGTAACTCAAAGAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS-3UTR CCA 90 bp TACTGGGCACAGGCCGCTATTTTAACCATGCAGCTTCTGTGGTTCATGCATTGCCGACCGTGCGGAATTTaGCCCGGGCTGCGTTCACCA +
Preference number: 4 (lower is better)
Translates to: YWAQAAILTMQLLWFMHCRPCGI*PGLRSP
Trigger: TGGTGAACGCAGCCCGGGCCAAATTCCGCACGGTCG...GCAATGCATGAACCACAGAAGCTGCATGGTTAAAATAGCGGCCTGTGCCCAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS-3UTR TCA 90 bp CAGACACCTCAAAGAATCCAGGGAGGGACACTAGAGGTTGAGCAGCAAGCTGCTCACGCAACAGCTAGCTaGGGTAGTGTGCATCCCAGA +
Preference number: 4 (lower is better)
Translates to: QTPQRIQGGTLEVEQQAAHATAS*GSVHPR
Trigger: TCTGGGATGCACACTACCTCAGCTAGCTGTTGCGTG...AGCAGCTTGCTGCTCAACCTCTAGTGTCCCTCCCTGGATTCTTTGAGGTGTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR TCA 90 bp CTGAAGGTAGTACCACACCCCCTGGCCCCCATATTCTTCCCATTGCATAAGCATCTTGGTGTTCTCCTCTaGGATCTGACTCCCCGCTGC +
Preference number: 4 (lower is better)
Translates to: LKVVPHPLAPIFFPLHKHLGVLL*DLTPRC
Trigger: GCAGCGGGGAGTCAGATCTCAGAGGAGAACACCAAG...ATGCTTATGCAATGGGAAGAATATGGGGGCCAGGGGGTGTGGTACTACCTTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000389636.9
ENST00000490337.6
CDS-3UTR TCA 90 bp TCTTTGAGTTACCAAATGCCTGAAGGTAGTACCACACCCCCTGGCCCCCATATTGAGCTGGCTTTCCCCTaGGGGACTAAGGCTGCTGTC +
Preference number: 4 (lower is better)
Translates to: SLSYQMPEGSTTPPGPHIELAFP*GTKAAV
Trigger: GACAGCAGCCTTAGTCCCTCAGGGGAAAGCCAGCTC...AATATGGGGGCCAGGGGGTGTGGTACTACCTTCAGGCATTTGGTAACTCAAAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000389636.9
ENST00000490337.6
CDS-3UTR GCA 90 bp GATTTTCTTGGTTGTGAGTTTTCAGATGTGCACAGTGGTAGCGACAGCAGACACCCCCCTTCCTGGGGATaGCGTCAGAGGAGTCCTGGC +
Preference number: 4 (lower is better)
Translates to: DFLGCEFSDVHSGSDSRHPPSWG*RQRSPG
Trigger: GCCAGGACTCCTCTGACGGCATCCCCAGGAAGGGGG...GTGTCTGCTGTCGCTACCACTGTGCACATCTGAAAACTCACAACCAAGAAAATC
54% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS-3UTR GCA 90 bp TGGCTCGGACAATTTCTTCCATGGGAGTGTTACTGTCCGGTCGATTTGCAAAGAGGGGCGGTGGAGCTCTaGTTGCTCAGAAGTCGGTCC +
Preference number: 4 (lower is better)
Translates to: WLGQFLPWECYCPVDLQRGAVEL*LLRSRS
Trigger: GGACCGACTTCTGAGCAAGCAGAGCTCCACCGCCCC...TCTTTGCAAATCGACCGGACAGTAACACTCCCATGGAAGAAATTGTCCGAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489036.5
CDS-3UTR CCA 90 bp TCTTTGAGTTACCAAATGCCTGAAGGTAGTACCACACCCCCTGGCCCCCATATTTCTCGAGCGAAAGCCTaGGTTGCTGAGCCTGCACCG +
Preference number: 4 (lower is better)
Translates to: SLSYQMPEGSTTPPGPHISRAKA*VAEPAP
Trigger: CGGTGCAGGCTCAGCAACCCAGGCTTTCGCTCGAGA...AATATGGGGGCCAGGGGGTGTGGTACTACCTTCAGGCATTTGGTAACTCAAAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS-3UTR CCA 90 bp TACCACACCCCCTGGCCCCCATATTCTTCCCATTGCATAAGCATGAGGTGTATACCGTCAGAGGAGTCCTaGCGGCTGACTTTCGAGCCA +
Preference number: 4 (lower is better)
Translates to: YHTPWPPYSSHCISMRCIPSEES*RLTFEP
Trigger: TGGCTCGAAAGTCAGCCGCCAGGACTCCTCTGACGG...TATACACCTCATGCTTATGCAATGGGAAGAATATGGGGGCCAGGGGGTGTGGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS-3UTR CCA 90 bp TACCACACCCCCTGGCCCCCATATTCTTCCCATTGCATAAGCATGAGGTGTATACTTGCTCCCCCTTCCTaGGGATGCCGTCAGAGGAGT +
Preference number: 4 (lower is better)
Translates to: YHTPWPPYSSHCISMRCILAPPS*GCRQRS
Trigger: ACTCCTCTGACGGCATCCCCAGGAAGGGGGAGCAAG...TATACACCTCATGCTTATGCAATGGGAAGAATATGGGGGCCAGGGGGTGTGGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS-3UTR CCA 90 bp AGCTTTTCCACCCCAGTAGAGTTTGGTTGTTATGACCAGACTGGACCTCCTCCACTGCGTTCACCACATTaGGGGCGGTGGAGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: SFSTPVEFGCYDQTGPPPLRSPH*GRWSSA
Trigger: AGCAGAGCTCCACCGCCCCCAATGTGGTGAACGCAG...TGGAGGAGGTCCAGTCTGGTCATAACAACCAAACTCTACTGGGGTGGAAAAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000489036.5
CDS-3UTR CCA 90 bp TGTGTCATGGCTCGGACAATTTCTTCCATGGGAGTGTTACTGTCCGGTCGATTTCGACCGTGCGGAATTTaGCCCGGGCTGCGTTCACCA +
Preference number: 4 (lower is better)
Translates to: CVMARTISSMGVLLSGRFRPCGI*PGLRSP
Trigger: TGGTGAACGCAGCCCGGGCCAAATTCCGCACGGTCG...AAATCGACCGGACAGTAACACTCCCATGGAAGAAATTGTCCGAGCCATGACACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489036.5
CDS-3UTR CCA 90 bp TACCACACCCCCTGGCCCCCATATTCTTCCCATTGCATAAGCATGAGGTGTATACTGTGGTGCAGACGGTaGTGTGCTCGCTGGACAGGT +
Preference number: 4 (lower is better)
Translates to: YHTPWPPYSSHCISMRCILWCRR*CARWTG
Trigger: ACCTGTCCAGCGAGCACACCACCGTCTGCACCACAG...TATACACCTCATGCTTATGCAATGGGAAGAATATGGGGGCCAGGGGGTGTGGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000389636.9
ENST00000490337.6
CDS-3UTR CCA 90 bp TACTGGGCACAGGCCGCTATTTTAACCATGCAGCTTCTGTGGTTCATGCATTGCCTGTGGTGCAGACGGTaGTGTGCTCGCTGGACAGGT +
Preference number: 4 (lower is better)
Translates to: YWAQAAILTMQLLWFMHCLWCRR*CARWTG
Trigger: ACCTGTCCAGCGAGCACACCACCGTCTGCACCACAG...GCAATGCATGAACCACAGAAGCTGCATGGTTAAAATAGCGGCCTGTGCCCAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389636.9
ENST00000490337.6
CDS-3UTR CCA 90 bp TCTTTGAGTTACCAAATGCCTGAAGGTAGTACCACACCCCCTGGCCCCCATATTTGTGCGGCATGCCTGTaGTGCAGACGGTGGTGTGCT +
Preference number: 4 (lower is better)
Translates to: SLSYQMPEGSTTPPGPHICAACL*CRRWCA
Trigger: AGCACACCACCGTCTGCACCACAGGCATGCCGCACA...AATATGGGGGCCAGGGGGTGTGGTACTACCTTCAGGCATTTGGTAACTCAAAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000389636.9
ENST00000490337.6
CDS-3UTR TCA 90 bp ACACCTCAGATTTCGAGTGCAACAAGGGTAAGCCCCATTAATCCATGCAAAGAATGTGATGCTGAGGCGTaGACGTCCCCAGGCTGCGCG +
Preference number: 4 (lower is better)
Translates to: TPQISSATRVSPINPCKECDAEA*TSPGCA
Trigger: CGCGCAGCCTGGGGACGTTCACGCCTCAGCATCACA...TTCTTTGCATGGATTAATGGGGCTTACCCTTGTTGCACTCGAAATCTGAGGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS-3UTR TCA 90 bp CAGCCTTCTTTGAGTTACCAAATGCCTGAAGGTAGTACCACACCCCCTGGCCCCTTGTTCAGGAGTGGATaGTCCCAGGAGCACAGAACT +
Preference number: 4 (lower is better)
Translates to: QPSLSYQMPEGSTTPPGPLFRSG*SQEHRT
Trigger: AGTTCTGTGCTCCTGGGATCATCCACTCCTGAACAA...GGGGCCAGGGGGTGTGGTACTACCTTCAGGCATTTGGTAACTCAAAGAAGGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR GCA 90 bp GTTGTGAGTTTTCAGATGTGCACAGTGGTAGCGACAGCAGACACCTCAAAGAATAGGCTTACCGCAAGATaGGCCGCCAGCATCCCCTGG +
Preference number: 4 (lower is better)
Translates to: VVSFQMCTVVATADTSKNRLTAR*AASIPW
Trigger: CCAGGGGATGCTGGCGGCGCATCTTGCGGTAAGCCT...ATTCTTTGAGGTGTCTGCTGTCGCTACCACTGTGCACATCTGAAAACTCACAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS-3UTR GCA 90 bp CTGGCCCCCATATTCTTCCCATTGCATAAGCATGAGGTGTATACAGCAATGCAACACAAGGGGCTGCGATaGAGGAAAGAGTCCCCGGGG +
Preference number: 4 (lower is better)
Translates to: LAPIFFPLHKHEVYTAMQHKGLR*RKESPG
Trigger: CCCCGGGGACTCTTTCCTGCATCGCAGCCCCTTGTG...TTGCATTGCTGTATACACCTCATGCTTATGCAATGGGAAGAATATGGGGGCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS-3UTR GCA 90 bp TACCACACCCCCTGGCCCCCATATTCTTCCCATTGCATAAGCATGAGGTGTATACACTCCATCTCGAGGTaGCCCAGTACATCGCCATGC +
Preference number: 4 (lower is better)
Translates to: YHTPWPPYSSHCISMRCIHSISR*PSTSPC
Trigger: GCATGGCGATGTACTGGGGCACCTCGAGATGGAGTG...TATACACCTCATGCTTATGCAATGGGAAGAATATGGGGGCCAGGGGGTGTGGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR GCA 90 bp TCTTTGAGTTACCAAATGCCTGAAGGTAGTACCACACCCCCTGGCCCCCATATTCACTCCATCTCGAGGTaGCCCAGTACATCGCCATGC +
Preference number: 4 (lower is better)
Translates to: SLSYQMPEGSTTPPGPHIHSISR*PSTSPC
Trigger: GCATGGCGATGTACTGGGGCACCTCGAGATGGAGTG...AATATGGGGGCCAGGGGGTGTGGTACTACCTTCAGGCATTTGGTAACTCAAAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR GCA 90 bp CAGACACCTCAAAGAATCCAGGGAGGGACACTAGAGGTTGAGCAGCAAGCTGCTATATTTCTGTTCGGCTaGTCCACTGGGCCTCACAGG +
Preference number: 4 (lower is better)
Translates to: QTPQRIQGGTLEVEQQAAIFLFG*STGPHR
Trigger: CCTGTGAGGCCCAGTGGAGCAGCCGAACAGAAATAT...AGCAGCTTGCTGCTCAACCTCTAGTGTCCCTCCCTGGATTCTTTGAGGTGTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471742.5
CDS-3UTR CCA 90 bp GTTGTGAGTTTTCAGATGTGCACAGTGGTAGCGACAGCAGACACCTCAAAGAATGTCCCCTCGGACTGGTaGTCTCCATCCACTCCGGCT +
Preference number: 4 (lower is better)
Translates to: VVSFQMCTVVATADTSKNVPSDW*SPSTPA
Trigger: AGCCGGAGTGGATGGAGACCACCAGTCCGAGGGGAC...ATTCTTTGAGGTGTCTGCTGTCGCTACCACTGTGCACATCTGAAAACTCACAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS-3UTR CCA 90 bp TCTTTGAGTTACCAAATGCCTGAAGGTAGTACCACACCCCCTGGCCCCCATATTATGCGGGCTCGCTTCTaGGCGATGGCTCAAATCAGC +
Preference number: 4 (lower is better)
Translates to: SLSYQMPEGSTTPPGPHIMRARF*AMAQIS
Trigger: GCTGATTTGAGCCATCGCCCAGAAGCGAGCCCGCAT...AATATGGGGGCCAGGGGGTGTGGTACTACCTTCAGGCATTTGGTAACTCAAAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS-3UTR CCA 90 bp CAGACACCTCAAAGAATCCAGGGAGGGACACTAGAGGTTGAGCAGCAAGCTGCTACTTCAGTGAAGCCCTaGAACTTTCAGGCACCCCGT +
Preference number: 4 (lower is better)
Translates to: QTPQRIQGGTLEVEQQAATSVKP*NFQAPR
Trigger: ACGGGGTGCCTGAAAGTTCCAGGGCTTCACTGAAGT...AGCAGCTTGCTGCTCAACCTCTAGTGTCCCTCCCTGGATTCTTTGAGGTGTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR CCA 90 bp TACCACACCCCCTGGCCCCCATATTCTTCCCATTGCATAAGCATGAGGTGTATACGGTGGTGTGCTCGCTaGACAGGTCGCAGAGCTTTA +
Preference number: 4 (lower is better)
Translates to: YHTPWPPYSSHCISMRCIRWCAR*TGRRAL
Trigger: TAAAGCTCTGCGACCTGTCCAGCGAGCACACCACCG...TATACACCTCATGCTTATGCAATGGGAAGAATATGGGGGCCAGGGGGTGTGGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000389636.9
ENST00000490337.6
CDS-3UTR TCA 90 bp ACACCTCAGATTTCGAGTGCAACAAGGGTAAGCCCCATTAATCCATGCAAAGAAGAAAGCCTGGGTTGCTaGGCCTGCACCGACACGGGT +
Preference number: 4 (lower is better)
Translates to: TPQISSATRVSPINPCKEESLGC*ACTDTG
Trigger: ACCCGTGTCGGTGCAGGCTCAGCAACCCAGGCTTTC...TTCTTTGCATGGATTAATGGGGCTTACCCTTGTTGCACTCGAAATCTGAGGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS-3UTR TCA 90 bp GTTGTGAGTTTTCAGATGTGCACAGTGGTAGCGACAGCAGACACCTCAAAGAATGCTGAGCATTCATGGTaGCTGCACGCAGCCCTTCGC +
Preference number: 4 (lower is better)
Translates to: VVSFQMCTVVATADTSKNAEHSW*LHAALR
Trigger: GCGAAGGGCTGCGTGCAGTCACCATGAATGCTCAGC...ATTCTTTGAGGTGTCTGCTGTCGCTACCACTGTGCACATCTGAAAACTCACAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS-3UTR TCA 90 bp AACACCTTTCTGTACTGGGCACAGGCCGCTATTTTAACCATGCAGCTTCTGTGGGCAGTCACGAGAGGTTaGGCAGTTGCGGGGATTTCT +
Preference number: 4 (lower is better)
Translates to: NTFLYWAQAAILTMQLLWAVTRG*AVAGIS
Trigger: AGAAATCCCCGCAACTGCTCAACCTCTCGTGACTGC...CCACAGAAGCTGCATGGTTAAAATAGCGGCCTGTGCCCAGTACAGAAAGGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS-3UTR TCA 90 bp CAGCCTTCTTTGAGTTACCAAATGCCTGAAGGTAGTACCACACCCCCTGGCCCCTTGCGGTGGACTCTTTaGGAGAAATGTGATGCTGAG +
Preference number: 4 (lower is better)
Translates to: QPSLSYQMPEGSTTPPGPLRWTL*EKCDAE
Trigger: CTCAGCATCACATTTCTCTCAAAGAGTCCACCGCAA...GGGGCCAGGGGGTGTGGTACTACCTTCAGGCATTTGGTAACTCAAAGAAGGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS-3UTR TCA 90 bp AACACCTTTCTGTACTGGGCACAGGCCGCTATTTTAACCATGCAGCTTCTGTGGCACGCAACAGCTAGCTaGGGTAGTGTGCATCCCAGA +
Preference number: 4 (lower is better)
Translates to: NTFLYWAQAAILTMQLLWHATAS*GSVHPR
Trigger: TCTGGGATGCACACTACCTCAGCTAGCTGTTGCGTG...CCACAGAAGCTGCATGGTTAAAATAGCGGCCTGTGCCCAGTACAGAAAGGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR TCA 90 bp TCTTTGAGTTACCAAATGCCTGAAGGTAGTACCACACCCCCTGGCCCCCATATTCACGCAACAGCTAGCTaGGGTAGTGTGCATCCCAGA +
Preference number: 4 (lower is better)
Translates to: SLSYQMPEGSTTPPGPHIHATAS*GSVHPR
Trigger: TCTGGGATGCACACTACCTCAGCTAGCTGTTGCGTG...AATATGGGGGCCAGGGGGTGTGGTACTACCTTCAGGCATTTGGTAACTCAAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR TCA 90 bp CAGACACCTCAAAGAATCCAGGGAGGGACACTAGAGGTTGAGCAGCAAGCTGCTTTGTTCAGGAGTGGATaGTCCCAGGAGCACAGAACT +
Preference number: 4 (lower is better)
Translates to: QTPQRIQGGTLEVEQQAALFRSG*SQEHRT
Trigger: AGTTCTGTGCTCCTGGGATCATCCACTCCTGAACAA...AGCAGCTTGCTGCTCAACCTCTAGTGTCCCTCCCTGGATTCTTTGAGGTGTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR TCA 90 bp GATTTTCTTGGTTGTGAGTTTTCAGATGTGCACAGTGGTAGCGACAGCAGACACGAGCTGGCTTTCCCCTaGGGGACTAAGGCTGCTGTC +
Preference number: 4 (lower is better)
Translates to: DFLGCEFSDVHSGSDSRHELAFP*GTKAAV
Trigger: GACAGCAGCCTTAGTCCCTCAGGGGAAAGCCAGCTC...GTGTCTGCTGTCGCTACCACTGTGCACATCTGAAAACTCACAACCAAGAAAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000389636.9
ENST00000490337.6
CDS-3UTR GCA 90 bp GTTGTGAGTTTTCAGATGTGCACAGTGGTAGCGACAGCAGACACCTCAAAGAATACACGGGTTTGCAGCTaGACGGAGGAGCAGGCAGGT +
Preference number: 4 (lower is better)
Translates to: VVSFQMCTVVATADTSKNTRVCS*TEEQAG
Trigger: ACCTGCCTGCTCCTCCGTGCAGCTGCAAACCCGTGT...ATTCTTTGAGGTGTCTGCTGTCGCTACCACTGTGCACATCTGAAAACTCACAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS-3UTR GCA 90 bp ACACCTCAGATTTCGAGTGCAACAAGGGTAAGCCCCATTAATCCATGCAAAGAATCCGCGGTGTCTGAATaGGGGCTCGCTTCTGGGCGA +
Preference number: 4 (lower is better)
Translates to: TPQISSATRVSPINPCKESAVSE*GLASGR
Trigger: TCGCCCAGAAGCGAGCCCGCATTCAGACACCGCGGA...TTCTTTGCATGGATTAATGGGGCTTACCCTTGTTGCACTCGAAATCTGAGGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS-3UTR GCA 90 bp AACACCTTTCTGTACTGGGCACAGGCCGCTATTTTAACCATGCAGCTTCTGTGGTATGGAGACTTGCATTaGTTCCCCAGGCAGCGCACG +
Preference number: 4 (lower is better)
Translates to: NTFLYWAQAAILTMQLLWYGDLH*FPRQRT
Trigger: CGTGCGCTGCCTGGGGAAGCAATGCAAGTCTCCATA...CCACAGAAGCTGCATGGTTAAAATAGCGGCCTGTGCCCAGTACAGAAAGGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS-3UTR GCA 90 bp TACCACACCCCCTGGCCCCCATATTCTTCCCATTGCATAAGCATGAGGTGTATACAGGCTATGGAGACTTaGATTGCTTCCCCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: YHTPWPPYSSHCISMRCIQAMET*IASPGS
Trigger: GCTGCCTGGGGAAGCAATGCAAGTCTCCATAGCCTG...TATACACCTCATGCTTATGCAATGGGAAGAATATGGGGGCCAGGGGGTGTGGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS-3UTR GCA 90 bp AACACCTTTCTGTACTGGGCACAGGCCGCTATTTTAACCATGCAGCTTCTGTGGCTAGCTGAGGTAGTGTaGATCCCAGACGCTCCGCAA +
Preference number: 4 (lower is better)
Translates to: NTFLYWAQAAILTMQLLWLAEVV*IPDAPQ
Trigger: TTGCGGAGCGTCTGGGATGCACACTACCTCAGCTAG...CCACAGAAGCTGCATGGTTAAAATAGCGGCCTGTGCCCAGTACAGAAAGGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR GCA 90 bp GTTGTGAGTTTTCAGATGTGCACAGTGGTAGCGACAGCAGACACCTCAAAGAATTGCCCCTGTCCGGGCTaGCAGCATCGTGGAGATCTT +
Preference number: 4 (lower is better)
Translates to: VVSFQMCTVVATADTSKNCPCPG*QHRGDL
Trigger: AAGATCTCCACGATGCTGGCAGCCCGGACAGGGGCA...ATTCTTTGAGGTGTCTGCTGTCGCTACCACTGTGCACATCTGAAAACTCACAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389636.9
ENST00000490337.6
CDS-3UTR CCA 90 bp CAGCCTTCTTTGAGTTACCAAATGCCTGAAGGTAGTACCACACCCCCTGGCCCCTGCCTTTGTGTGCGATaGGAAGGCAAAGATCACTTG +
Preference number: 4 (lower is better)
Translates to: QPSLSYQMPEGSTTPPGPCLCVR*EGKDHL
Trigger: CAAGTGATCTTTGCCTTCCCATCGCACACAAAGGCA...GGGGCCAGGGGGTGTGGTACTACCTTCAGGCATTTGGTAACTCAAAGAAGGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS-3UTR CCA 90 bp ACACCTCAGATTTCGAGTGCAACAAGGGTAAGCCCCATTAATCCATGCAAAGAAGTCCCCTCGGACTGGTaGTCTCCATCCACTCCGGCT +
Preference number: 4 (lower is better)
Translates to: TPQISSATRVSPINPCKEVPSDW*SPSTPA
Trigger: AGCCGGAGTGGATGGAGACCACCAGTCCGAGGGGAC...TTCTTTGCATGGATTAATGGGGCTTACCCTTGTTGCACTCGAAATCTGAGGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS-3UTR CCA 90 bp CTGGCCCCCATATTCTTCCCATTGCATAAGCATGAGGTGTATACAGCAATGCAACCGTCAGAGGAGTCCTaGCGGCTGACTTTCGAGCCA +
Preference number: 4 (lower is better)
Translates to: LAPIFFPLHKHEVYTAMQPSEES*RLTFEP
Trigger: TGGCTCGAAAGTCAGCCGCCAGGACTCCTCTGACGG...TTGCATTGCTGTATACACCTCATGCTTATGCAATGGGAAGAATATGGGGGCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS-3UTR CCA 90 bp ATCACATTTCCCATTAGACAGCACCTCAGCTCCTCTATACATACAGCAGTTCGCCTTGCTCCCCCTTCCTaGGGATGCCGTCAGAGGAGT +
Preference number: 4 (lower is better)
Translates to: ITFPIRQHLSSSIHTAVRLAPPS*GCRQRS
Trigger: ACTCCTCTGACGGCATCCCCAGGAAGGGGGAGCAAG...GCGAACTGCTGTATGTATAGAGGAGCTGAGGTGCTGTCTAATGGGAAATGTGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS-3UTR CCA 90 bp GATTTTCTTGGTTGTGAGTTTTCAGATGTGCACAGTGGTAGCGACAGCAGACACCTGCGTTCACCACATTaGGGGCGGTGGAGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: DFLGCEFSDVHSGSDSRHLRSPH*GRWSSA
Trigger: AGCAGAGCTCCACCGCCCCCAATGTGGTGAACGCAG...GTGTCTGCTGTCGCTACCACTGTGCACATCTGAAAACTCACAACCAAGAAAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS-3UTR CCA 90 bp CAGCCTTCTTTGAGTTACCAAATGCCTGAAGGTAGTACCACACCCCCTGGCCCCCACTTTCATAGGCGATaGTCATCAGCCGTTCAGCAA +
Preference number: 4 (lower is better)
Translates to: QPSLSYQMPEGSTTPPGPHFHRR*SSAVQQ
Trigger: TTGCTGAACGGCTGATGACCATCGCCTATGAAAGTG...GGGGCCAGGGGGTGTGGTACTACCTTCAGGCATTTGGTAACTCAAAGAAGGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR CCA 90 bp CAGCCTTCTTTGAGTTACCAAATGCCTGAAGGTAGTACCACACCCCCTGGCCCCGGACAATTTCTTCCATaGGAGTGTTACTGTCCGGTC +
Preference number: 4 (lower is better)
Translates to: QPSLSYQMPEGSTTPPGPGQFLP*ECYCPV
Trigger: GACCGGACAGTAACACTCCCATGGAAGAAATTGTCC...GGGGCCAGGGGGTGTGGTACTACCTTCAGGCATTTGGTAACTCAAAGAAGGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302490.12
ENST00000471742.5
ENST00000490337.6
CDS-3UTR CCA 90 bp TACCACACCCCCTGGCCCCCATATTCTTCCCATTGCATAAGCATGAGGTGTATACTGCAGCACAACAGTTaGAACTGGGGGAAGGCAGAG +
Preference number: 4 (lower is better)
Translates to: YHTPWPPYSSHCISMRCILQHNS*NWGKAE
Trigger: CTCTGCCTTCCCCCAGTTCCAACTGTTGTGCTGCAG...TATACACCTCATGCTTATGCAATGGGAAGAATATGGGGGCCAGGGGGTGTGGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000618897.4
CDS-3UTR TCA 90 bp CAGCCTTCTTTGAGTTACCAAATGCCTGAAGGTAGTACCACACCCCCTGGCCCCGTTTCCGTATTTTCCTaGGATGATTCCACAGGCAAG +
Preference number: 4 (lower is better)
Translates to: QPSLSYQMPEGSTTPPGPVSVFS*DDSTGK
Trigger: CTTGCCTGTGGAATCATCTCAGGAAAATACGGAAAC...GGGGCCAGGGGGTGTGGTACTACCTTCAGGCATTTGGTAACTCAAAGAAGGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR TCA 90 bp CAGCCTTCTTTGAGTTACCAAATGCCTGAAGGTAGTACCACACCCCCTGGCCCCCTGTACAGCCTTCTTTaGGTTACCAAATGCCTGAAG +
Preference number: 4 (lower is better)
Translates to: QPSLSYQMPEGSTTPPGPLYSLL*VTKCLK
Trigger: CTTCAGGCATTTGGTAACTCAAAGAAGGCTGTACAG...GGGGCCAGGGGGTGTGGTACTACCTTCAGGCATTTGGTAACTCAAAGAAGGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR GCA 90 bp CCTTCTTTGAGTTACCAAATGCCTGAAGGTAGTACCACACCCCCTGGCCCCCATCATAAAAAGGGGCTCTaGCCAGACTCAGACCAAATC +
Preference number: 4 (lower is better)
Translates to: PSLSYQMPEGSTTPPGPHHKKGL*PDSDQI
Trigger: GATTTGGTCTGAGTCTGGGCAGAGCCCCTTTTTATG...ATGGGGGCCAGGGGGTGTGGTACTACCTTCAGGCATTTGGTAACTCAAAGAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS-3UTR GCA 90 bp CAGACACCTCAAAGAATCCAGGGAGGGACACTAGAGGTTGAGCAGCAAGCTGCTCATAAAAAGGGGCTCTaGCCAGACTCAGACCAAATC +
Preference number: 4 (lower is better)
Translates to: QTPQRIQGGTLEVEQQAAHKKGL*PDSDQI
Trigger: GATTTGGTCTGAGTCTGGGCAGAGCCCCTTTTTATG...AGCAGCTTGCTGCTCAACCTCTAGTGTCCCTCCCTGGATTCTTTGAGGTGTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS-3UTR GCA 90 bp CCTTCTTTGAGTTACCAAATGCCTGAAGGTAGTACCACACCCCCTGGCCCCCATACAAATCGGGAGGGTTaGTCCATAAAAAGGGGCTCT +
Preference number: 4 (lower is better)
Translates to: PSLSYQMPEGSTTPPGPHTNREG*SIKRGS
Trigger: AGAGCCCCTTTTTATGGAGCAACCCTCCCGATTTGT...ATGGGGGCCAGGGGGTGTGGTACTACCTTCAGGCATTTGGTAACTCAAAGAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS-3UTR GCA 90 bp CAGACACCTCAAAGAATCCAGGGAGGGACACTAGAGGTTGAGCAGCAAGCTGCTCTCTTTGCCTTTGTGTaGGATGGGAAGGCAAAGATC +
Preference number: 4 (lower is better)
Translates to: QTPQRIQGGTLEVEQQAALFAFV*DGKAKI
Trigger: GATCTTTGCCTTCCCATCGCACACAAAGGCAAAGAG...AGCAGCTTGCTGCTCAACCTCTAGTGTCCCTCCCTGGATTCTTTGAGGTGTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS-3UTR GCA 90 bp CAGCCTTCTTTGAGTTACCAAATGCCTGAAGGTAGTACCACACCCCCTGGCCCCAAACAGCCAAATCCATaGAGTGGGGGAGGTTTTTAC +
Preference number: 4 (lower is better)
Translates to: QPSLSYQMPEGSTTPPGPKQPNP*SGGGFY
Trigger: GTAAAAACCTCCCCCACTGCATGGATTTGGCTGTTT...GGGGCCAGGGGGTGTGGTACTACCTTCAGGCATTTGGTAACTCAAAGAAGGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS-3UTR GCA 90 bp CAGACACCTCAAAGAATCCAGGGAGGGACACTAGAGGTTGAGCAGCAAGCTGCTAGGGAGAATCAGGTTTaGAAATCTTCCCGGGCTGTA +
Preference number: 4 (lower is better)
Translates to: QTPQRIQGGTLEVEQQAARENQV*KSSRAV
Trigger: TACAGCCCGGGAAGATTTGCAAACCTGATTCTCCCT...AGCAGCTTGCTGCTCAACCTCTAGTGTCCCTCCCTGGATTCTTTGAGGTGTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS-3UTR GCA 90 bp CTGGCCCCCATATTCTTCCCATTGCATAAGCATGAGGTGTATACAGCAATGCAACGGTGGAGCTCTGCTTaGTCAGAAGTCGGTCCTCAC +
Preference number: 4 (lower is better)
Translates to: LAPIFFPLHKHEVYTAMQRWSSA*SEVGPH
Trigger: GTGAGGACCGACTTCTGAGCAAGCAGAGCTCCACCG...TTGCATTGCTGTATACACCTCATGCTTATGCAATGGGAAGAATATGGGGGCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS-3UTR GCA 90 bp CAGAATCACTTCAGCCTTTCCAGCAGCATAGACTTCGGCAGTATCAAAGAGGTTCGGTGGAGCTCTGCTTaGTCAGAAGTCGGTCCTCAC +
Preference number: 4 (lower is better)
Translates to: QNHFSLSSSIDFGSIKEVRWSSA*SEVGPH
Trigger: GTGAGGACCGACTTCTGAGCAAGCAGAGCTCCACCG...AACCTCTTTGATACTGCCGAAGTCTATGCTGCTGGAAAGGCTGAAGTGATTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489036.5
CDS-3UTR GCA 90 bp GATTTTCTTGGTTGTGAGTTTTCAGATGTGCACAGTGGTAGCGACAGCAGACACCGGTGGAGCTCTGCTTaGTCAGAAGTCGGTCCTCAC +
Preference number: 4 (lower is better)
Translates to: DFLGCEFSDVHSGSDSRHRWSSA*SEVGPH
Trigger: GTGAGGACCGACTTCTGAGCAAGCAGAGCTCCACCG...GTGTCTGCTGTCGCTACCACTGTGCACATCTGAAAACTCACAACCAAGAAAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS-3UTR GCA 90 bp TTCTGTTTCAGCTTTTCCACCCCAGTAGAGTTTGGTTGTTATGACCAGACTGGAGAATTTGGCCCGGGCTaGGTTCACCACATTGGGGGC +
Preference number: 4 (lower is better)
Translates to: FCFSFSTPVEFGCYDQTGEFGPG*VHHIGG
Trigger: GCCCCCAATGTGGTGAACGCAGCCCGGGCCAAATTC...TCCAGTCTGGTCATAACAACCAAACTCTACTGGGGTGGAAAAGCTGAAACAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000489036.5
CDS-3UTR GCA 90 bp CAGCCTTCTTTGAGTTACCAAATGCCTGAAGGTAGTACCACACCCCCTGGCCCCTATTTCATGCCAGTCTaGTTTGCGGTGGACTCTTTG +
Preference number: 4 (lower is better)
Translates to: QPSLSYQMPEGSTTPPGPYFMPV*FAVDSL
Trigger: CAAAGAGTCCACCGCAAAGCAGACTGGCATGAAATA...GGGGCCAGGGGGTGTGGTACTACCTTCAGGCATTTGGTAACTCAAAGAAGGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS-3UTR GCA 90 bp CAGCCTTCTTTGAGTTACCAAATGCCTGAAGGTAGTACCACACCCCCTGGCCCCACTGTCCGGTCGATTTaGAAAGACCACATCCACATA +
Preference number: 4 (lower is better)
Translates to: QPSLSYQMPEGSTTPPGPTVRSI*KDHIHI
Trigger: TATGTGGATGTGGTCTTTGCAAATCGACCGGACAGT...GGGGCCAGGGGGTGTGGTACTACCTTCAGGCATTTGGTAACTCAAAGAAGGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302490.12
ENST00000471742.5
ENST00000490337.6
CDS-3UTR GCA 90 bp CAGACACCTCAAAGAATCCAGGGAGGGACACTAGAGGTTGAGCAGCAAGCTGCTCCCAGTACATCGCCATaGCTTGGTTTATCACATGTG +
Preference number: 4 (lower is better)
Translates to: QTPQRIQGGTLEVEQQAAPSTSP*LGLSHV
Trigger: CACATGTGATAAACCAAGGCATGGCGATGTACTGGG...AGCAGCTTGCTGCTCAACCTCTAGTGTCCCTCCCTGGATTCTTTGAGGTGTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR GCA 90 bp CAGCCTTCTTTGAGTTACCAAATGCCTGAAGGTAGTACCACACCCCCTGGCCCCATCTATAGTCCTTCTTaGTGTAGGGCTTGTTGCGCA +
Preference number: 4 (lower is better)
Translates to: QPSLSYQMPEGSTTPPGPIYSPS*CRACCA
Trigger: TGCGCAACAAGCCCTACAGCAAGAAGGACTATAGAT...GGGGCCAGGGGGTGTGGTACTACCTTCAGGCATTTGGTAACTCAAAGAAGGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR GCA 90 bp TACTGGGCACAGGCCGCTATTTTAACCATGCAGCTTCTGTGGTTCATGCATTGCTTTCCAAGATTCCTGTaGGGCATGCCTGTGGTGCAG +
Preference number: 4 (lower is better)
Translates to: YWAQAAILTMQLLWFMHCFPRFL*GMPVVQ
Trigger: CTGCACCACAGGCATGCCGCACAGGAATCTTGGAAA...GCAATGCATGAACCACAGAAGCTGCATGGTTAAAATAGCGGCCTGTGCCCAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389636.9
ENST00000490337.6
CDS-3UTR GCA 90 bp CTGAAGGTAGTACCACACCCCCTGGCCCCCATATTCTTCCCATTGCATAAGCATTCCAAGATTCCTGTATaGCATGCCCGTCTCTGCTCT +
Preference number: 4 (lower is better)
Translates to: LKVVPHPLAPIFFPLHKHSKIPV*HARLCS
Trigger: AGAGCAGAGACGGGCATGGCATACAGGAATCTTGGA...ATGCTTATGCAATGGGAAGAATATGGGGGCCAGGGGGTGTGGTACTACCTTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000471742.5
CDS-3UTR CCA 90 bp ATCACATTTCCCATTAGACAGCACCTCAGCTCCTCTATACATACAGCAGTTCGCCTCGCTTCTGGGCGATaGCTCAAATCAGCGCAGGCT +
Preference number: 4 (lower is better)
Translates to: ITFPIRQHLSSSIHTAVRLASGR*LKSAQA
Trigger: AGCCTGCGCTGATTTGAGCCATCGCCCAGAAGCGAG...GCGAACTGCTGTATGTATAGAGGAGCTGAGGTGCTGTCTAATGGGAAATGTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS-3UTR CCA 90 bp TACTGGGCACAGGCCGCTATTTTAACCATGCAGCTTCTGTGGTTCATGCATTGCGCTCTGTGCAGGCTATaGAGACTTGCATTGCTTCCC +
Preference number: 4 (lower is better)
Translates to: YWAQAAILTMQLLWFMHCALCRL*RLALLP
Trigger: GGGAAGCAATGCAAGTCTCCATAGCCTGCACAGAGC...GCAATGCATGAACCACAGAAGCTGCATGGTTAAAATAGCGGCCTGTGCCCAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS-3UTR CCA 90 bp GATTTTCTTGGTTGTGAGTTTTCAGATGTGCACAGTGGTAGCGACAGCAGACACCCACATTGGGGGCGGTaGAGCTCTGCTTGCTCAGAA +
Preference number: 4 (lower is better)
Translates to: DFLGCEFSDVHSGSDSRHPHWGR*SSACSE
Trigger: TTCTGAGCAAGCAGAGCTCCACCGCCCCCAATGTGG...GTGTCTGCTGTCGCTACCACTGTGCACATCTGAAAACTCACAACCAAGAAAATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS-3UTR CCA 90 bp GACTTCGGCAGTATCAAAGAGGTTAACACCACTTTCATAGGCGATGGTCATCAGCCACATTGGGGGCGGTaGAGCTCTGCTTGCTCAGAA +
Preference number: 4 (lower is better)
Translates to: DFGSIKEVNTTFIGDGHQPHWGR*SSACSE
Trigger: TTCTGAGCAAGCAGAGCTCCACCGCCCCCAATGTGG...CTGATGACCATCGCCTATGAAAGTGGTGTTAACCTCTTTGATACTGCCGAAGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489036.5
CDS-3UTR CCA 90 bp CAGCCTTCTTTGAGTTACCAAATGCCTGAAGGTAGTACCACACCCCCTGGCCCCGTACAAGGCCATTCTTaGGGCCAAGCAACAGTAAAT +
Preference number: 4 (lower is better)
Translates to: QPSLSYQMPEGSTTPPGPVQGHS*GQATVN
Trigger: ATTTACTGTTGCTTGGCCCCAAGAATGGCCTTGTAC...GGGGCCAGGGGGTGTGGTACTACCTTCAGGCATTTGGTAACTCAAAGAAGGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000302490.12
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR CCA 90 bp GTTGTGAGTTTTCAGATGTGCACAGTGGTAGCGACAGCAGACACCTCAAAGAATCGGTGGTGTGCTCGCTaGACAGGTCGCAGAGCTTTA +
Preference number: 4 (lower is better)
Translates to: VVSFQMCTVVATADTSKNRWCAR*TGRRAL
Trigger: TAAAGCTCTGCGACCTGTCCAGCGAGCACACCACCG...ATTCTTTGAGGTGTCTGCTGTCGCTACCACTGTGCACATCTGAAAACTCACAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389636.9
ENST00000490337.6
CDS-3UTR CCA 90 bp GTTGTGAGTTTTCAGATGTGCACAGTGGTAGCGACAGCAGACACCTCAAAGAATTCCCGACAGAGCTGTTaGTTGTGTGTCCCTGCCCAG +
Preference number: 4 (lower is better)
Translates to: VVSFQMCTVVATADTSKNSRQSC*LCVPAQ
Trigger: CTGGGCAGGGACACACAACCAACAGCTCTGTCGGGA...ATTCTTTGAGGTGTCTGCTGTCGCTACCACTGTGCACATCTGAAAACTCACAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471742.5
CDS-3UTR CCA 90 bp TCTTTGAGTTACCAAATGCCTGAAGGTAGTACCACACCCCCTGGCCCCCATATTCGATTCACTGGATTTTaGCAGACCCAGCTTGGGGCT +
Preference number: 4 (lower is better)
Translates to: SLSYQMPEGSTTPPGPHIRFTGF*QTQLGA
Trigger: AGCCCCAAGCTGGGTCTGCCAAAATCCAGTGAATCG...AATATGGGGGCCAGGGGGTGTGGTACTACCTTCAGGCATTTGGTAACTCAAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000471742.5
CDS-3UTR CCA 90 bp CCTTCTTTGAGTTACCAAATGCCTGAAGGTAGTACCACACCCCCTGGCCCCCATTTAGAGCCGATTCACTaGATTTTGGCAGACCCAGCT +
Preference number: 4 (lower is better)
Translates to: PSLSYQMPEGSTTPPGPHLEPIH*ILADPA
Trigger: AGCTGGGTCTGCCAAAATCCAGTGAATCGGCTCTAA...ATGGGGGCCAGGGGGTGTGGTACTACCTTCAGGCATTTGGTAACTCAAAGAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000471742.5
CDS-3UTR CCA 90 bp TCTTTGAGTTACCAAATGCCTGAAGGTAGTACCACACCCCCTGGCCCCCATATTTGCCCGTCTCTGCTCTaGTGGTTTCCTGCAACGAAA +
Preference number: 4 (lower is better)
Translates to: SLSYQMPEGSTTPPGPHICPSLL*WFPATK
Trigger: TTTCGTTGCAGGAAACCACCAGAGCAGAGACGGGCA...AATATGGGGGCCAGGGGGTGTGGTACTACCTTCAGGCATTTGGTAACTCAAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000471742.5
CDS-3UTR TCA 90 bp CCTTCTTTGAGTTACCAAATGCCTGAAGGTAGTACCACACCCCCTGGCCCCCATGGCTGTAATCTCGGCTaGTTAAACAGCCAAATCCAT +
Preference number: 4 (lower is better)
Translates to: PSLSYQMPEGSTTPPGPHGCNLG*LNSQIH
Trigger: ATGGATTTGGCTGTTTAATCAGCCGAGATTACAGCC...ATGGGGGCCAGGGGGTGTGGTACTACCTTCAGGCATTTGGTAACTCAAAGAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS-3UTR TCA 90 bp GATTTTCTTGGTTGTGAGTTTTCAGATGTGCACAGTGGTAGCGACAGCAGACACGCAGTCACGAGAGGTTaGGCAGTTGCGGGGATTTCT +
Preference number: 4 (lower is better)
Translates to: DFLGCEFSDVHSGSDSRHAVTRG*AVAGIS
Trigger: AGAAATCCCCGCAACTGCTCAACCTCTCGTGACTGC...GTGTCTGCTGTCGCTACCACTGTGCACATCTGAAAACTCACAACCAAGAAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS-3UTR TCA 90 bp CAGCCTTCTTTGAGTTACCAAATGCCTGAAGGTAGTACCACACCCCCTGGCCCCACCTCATCTGAAATTTaGCCTCCAAATGTCACCCAT +
Preference number: 4 (lower is better)
Translates to: QPSLSYQMPEGSTTPPGPTSSEI*PPNVTH
Trigger: ATGGGTGACATTTGGAGGTCAAATTTCAGATGAGGT...GGGGCCAGGGGGTGTGGTACTACCTTCAGGCATTTGGTAACTCAAAGAAGGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR TCA 90 bp CTGAAGGTAGTACCACACCCCCTGGCCCCCATATTCTTCCCATTGCATAAGCATCGTATTTTCCTGAGATaGTTCCACAGGCAAGTGGAG +
Preference number: 4 (lower is better)
Translates to: LKVVPHPLAPIFFPLHKHRIFLR*FHRQVE
Trigger: CTCCACTTGCCTGTGGAATCATCTCAGGAAAATACG...ATGCTTATGCAATGGGAAGAATATGGGGGCCAGGGGGTGTGGTACTACCTTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR TCA 90 bp CTGGCCCCCATATTCTTCCCATTGCATAAGCATGAGGTGTATACAGCAATGCAACACGCAACAGCTAGCTaGGGTAGTGTGCATCCCAGA +
Preference number: 4 (lower is better)
Translates to: LAPIFFPLHKHEVYTAMQHATAS*GSVHPR
Trigger: TCTGGGATGCACACTACCTCAGCTAGCTGTTGCGTG...TTGCATTGCTGTATACACCTCATGCTTATGCAATGGGAAGAATATGGGGGCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR TCA 90 bp GATTTTCTTGGTTGTGAGTTTTCAGATGTGCACAGTGGTAGCGACAGCAGACACCACGCAACAGCTAGCTaGGGTAGTGTGCATCCCAGA +
Preference number: 4 (lower is better)
Translates to: DFLGCEFSDVHSGSDSRHHATAS*GSVHPR
Trigger: TCTGGGATGCACACTACCTCAGCTAGCTGTTGCGTG...GTGTCTGCTGTCGCTACCACTGTGCACATCTGAAAACTCACAACCAAGAAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR TCA 90 bp CCTTCTTTGAGTTACCAAATGCCTGAAGGTAGTACCACACCCCCTGGCCCCCATCACCAAGGTTTTCAATaGGTTGTTCAGGAGTGGATG +
Preference number: 4 (lower is better)
Translates to: PSLSYQMPEGSTTPPGPHHQGFQ*VVQEWM
Trigger: CATCCACTCCTGAACAACTCATTGAAAACCTTGGTG...ATGGGGGCCAGGGGGTGTGGTACTACCTTCAGGCATTTGGTAACTCAAAGAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR TCA 90 bp CAGCCTTCTTTGAGTTACCAAATGCCTGAAGGTAGTACCACACCCCCTGGCCCCGGATTTTCTTGGTTGTaGGTTTTCAGATGTGCACAG +
Preference number: 4 (lower is better)
Translates to: QPSLSYQMPEGSTTPPGPGFSWL*VFRCAQ
Trigger: CTGTGCACATCTGAAAACTCACAACCAAGAAAATCC...GGGGCCAGGGGGTGTGGTACTACCTTCAGGCATTTGGTAACTCAAAGAAGGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR TCA 90 bp TCTTTGAGTTACCAAATGCCTGAAGGTAGTACCACACCCCCTGGCCCCCATATTGGGAGAACAGTTGCCTaGATGGCACCAAGGTTTTCA +
Preference number: 4 (lower is better)
Translates to: SLSYQMPEGSTTPPGPHIGRTVA*MAPRFS
Trigger: TGAAAACCTTGGTGCCATTCAGGCAACTGTTCTCCC...AATATGGGGGCCAGGGGGTGTGGTACTACCTTCAGGCATTTGGTAACTCAAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000618897.4
CDS-3UTR GCA 90 bp CTGAAGGTAGTACCACACCCCCTGGCCCCCATATTCTTCCCATTGCATAAGCATACAAATCGGGAGGGTTaGTCCATAAAAAGGGGCTCT +
Preference number: 4 (lower is better)
Translates to: LKVVPHPLAPIFFPLHKHTNREG*SIKRGS
Trigger: AGAGCCCCTTTTTATGGAGCAACCCTCCCGATTTGT...ATGCTTATGCAATGGGAAGAATATGGGGGCCAGGGGGTGTGGTACTACCTTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS-3UTR GCA 90 bp GTTGTGAGTTTTCAGATGTGCACAGTGGTAGCGACAGCAGACACCTCAAAGAATTATGGAGACTTGCATTaGTTCCCCAGGCAGCGCACG +
Preference number: 4 (lower is better)
Translates to: VVSFQMCTVVATADTSKNYGDLH*FPRQRT
Trigger: CGTGCGCTGCCTGGGGAAGCAATGCAAGTCTCCATA...ATTCTTTGAGGTGTCTGCTGTCGCTACCACTGTGCACATCTGAAAACTCACAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS-3UTR GCA 90 bp CCTTCTTTGAGTTACCAAATGCCTGAAGGTAGTACCACACCCCCTGGCCCCCATACTGTCCGGTCGATTTaGAAAGACCACATCCACATA +
Preference number: 4 (lower is better)
Translates to: PSLSYQMPEGSTTPPGPHTVRSI*KDHIHI
Trigger: TATGTGGATGTGGTCTTTGCAAATCGACCGGACAGT...ATGGGGGCCAGGGGGTGTGGTACTACCTTCAGGCATTTGGTAACTCAAAGAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000302490.12
ENST00000471742.5
ENST00000490337.6
CDS-3UTR GCA 90 bp CCTTCTTTGAGTTACCAAATGCCTGAAGGTAGTACCACACCCCCTGGCCCCCATTGGAGACCATGTCATTaGGCCAACACCTATTTTGTG +
Preference number: 4 (lower is better)
Translates to: PSLSYQMPEGSTTPPGPHWRPCH*ANTYFV
Trigger: CACAAAATAGGTGTTGGCGCAATGACATGGTCTCCA...ATGGGGGCCAGGGGGTGTGGTACTACCTTCAGGCATTTGGTAACTCAAAGAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR GCA 90 bp GATTTTCTTGGTTGTGAGTTTTCAGATGTGCACAGTGGTAGCGACAGCAGACACCTAGCTGAGGTAGTGTaGATCCCAGACGCTCCGCAA +
Preference number: 4 (lower is better)
Translates to: DFLGCEFSDVHSGSDSRHLAEVV*IPDAPQ
Trigger: TTGCGGAGCGTCTGGGATGCACACTACCTCAGCTAG...GTGTCTGCTGTCGCTACCACTGTGCACATCTGAAAACTCACAACCAAGAAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR GCA 90 bp GTTGTGAGTTTTCAGATGTGCACAGTGGTAGCGACAGCAGACACCTCAAAGAATCTAGCTGAGGTAGTGTaGATCCCAGACGCTCCGCAA +
Preference number: 4 (lower is better)
Translates to: VVSFQMCTVVATADTSKNLAEVV*IPDAPQ
Trigger: TTGCGGAGCGTCTGGGATGCACACTACCTCAGCTAG...ATTCTTTGAGGTGTCTGCTGTCGCTACCACTGTGCACATCTGAAAACTCACAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR GCA 90 bp ATCACATTTCCCATTAGACAGCACCTCAGCTCCTCTATACATACAGCAGTTCGCCTAGCTGAGGTAGTGTaGATCCCAGACGCTCCGCAA +
Preference number: 4 (lower is better)
Translates to: ITFPIRQHLSSSIHTAVRLAEVV*IPDAPQ
Trigger: TTGCGGAGCGTCTGGGATGCACACTACCTCAGCTAG...GCGAACTGCTGTATGTATAGAGGAGCTGAGGTGCTGTCTAATGGGAAATGTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302490.12
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR GCA 90 bp GATTTTCTTGGTTGTGAGTTTTCAGATGTGCACAGTGGTAGCGACAGCAGACACGGGGCTCGGGATGTCTaGACAGGCAGGTTTATACAG +
Preference number: 4 (lower is better)
Translates to: DFLGCEFSDVHSGSDSRHGARDV*TGRFIQ
Trigger: CTGTATAAACCTGCCTGTGCAGACATCCCGAGCCCC...GTGTCTGCTGTCGCTACCACTGTGCACATCTGAAAACTCACAACCAAGAAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000471742.5
CDS-3UTR GCA 90 bp CAGACACCTCAAAGAATCCAGGGAGGGACACTAGAGGTTGAGCAGCAAGCTGCTTTGGTCACTGCTAGGTaGCATCTACATTTTAGAGCC +
Preference number: 4 (lower is better)
Translates to: QTPQRIQGGTLEVEQQAALVTAR*HLHFRA
Trigger: GGCTCTAAAATGTAGATGGCACCTAGCAGTGACCAA...AGCAGCTTGCTGCTCAACCTCTAGTGTCCCTCCCTGGATTCTTTGAGGTGTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471742.5
CDS-3UTR GCA 90 bp ATCACATTTCCCATTAGACAGCACCTCAGCTCCTCTATACATACAGCAGTTCGCGATTCCTGTATGCCATaGCCGTCTCTGCTCTGGTGG +
Preference number: 4 (lower is better)
Translates to: ITFPIRQHLSSSIHTAVRDSCMP*PSLLWW
Trigger: CCACCAGAGCAGAGACGGGCATGGCATACAGGAATC...GCGAACTGCTGTATGTATAGAGGAGCTGAGGTGCTGTCTAATGGGAAATGTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471742.5
CDS-3UTR GCA 90 bp CTGAAGGTAGTACCACACCCCCTGGCCCCCATATTCTTCCCATTGCATAAGCATCTTTGGGAGAACAGTTaGCTGAATGGCACCAAGGTT +
Preference number: 4 (lower is better)
Translates to: LKVVPHPLAPIFFPLHKHLWENS*LNGTKV
Trigger: AACCTTGGTGCCATTCAGGCAACTGTTCTCCCAAAG...ATGCTTATGCAATGGGAAGAATATGGGGGCCAGGGGGTGTGGTACTACCTTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000618897.4
CDS-3UTR CCA 90 bp CAGACACCTCAAAGAATCCAGGGAGGGACACTAGAGGTTGAGCAGCAAGCTGCTAACACCTTTCTGTACTaGGCACAGGCCGCTATTTTA +
Preference number: 4 (lower is better)
Translates to: QTPQRIQGGTLEVEQQAANTFLY*AQAAIL
Trigger: TAAAATAGCGGCCTGTGCCCAGTACAGAAAGGTGTT...AGCAGCTTGCTGCTCAACCTCTAGTGTCCCTCCCTGGATTCTTTGAGGTGTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR CCA 90 bp TACTGGGCACAGGCCGCTATTTTAACCATGCAGCTTCTGTGGTTCATGCATTGCCCGTCTCTGCTCTGGTaGTTTCCTGCAACGAAATTC +
Preference number: 4 (lower is better)
Translates to: YWAQAAILTMQLLWFMHCPSLLW*FPATKF
Trigger: GAATTTCGTTGCAGGAAACCACCAGAGCAGAGACGG...GCAATGCATGAACCACAGAAGCTGCATGGTTAAAATAGCGGCCTGTGCCCAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471742.5
3UTR CAA 72 bp GTTATGACCAGACTGGACCTCCTCCAGCCTTTCTTCTaGATGATGCTCCCCAGAATCACTTCAGCCTTTCCA +
Preference number: 4 (lower is better)
Translates to: VMTRLDLLQPFF*MMLPRITSAFP
Trigger: TGGAAAGGCTGAAGTGATTCTGGGGAGCATCATCAAGAAGAAAGGCTGGAGGAGGTCCAGTCTGGTCATAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489036.5
CDS-3UTR TCA 90 bp AGTTGTACAAGGCCATTCTTGGGGCCAAGCAACAGTAAATATTTGAAAGGTAATGAAAGCCTGGGTTGCTaGGCCTGCACCGACACGGGT +
Preference number: 4 (lower is better)
Translates to: SCTRPFLGPSNSKYLKGNESLGC*ACTDTG
Trigger: ACCCGTGTCGGTGCAGGCTCAGCAACCCAGGCTTTC...ATTACCTTTCAAATATTTACTGTTGCTTGGCCCCAAGAATGGCCTTGTACAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS-3UTR TCA 90 bp AGTTGTACAAGGCCATTCTTGGGGCCAAGCAACAGTAAATATTTGAAAGGTAATAGGAGTCCTGGCGGCTaGCTTTCGAGCCAAGCCCAC +
Preference number: 4 (lower is better)
Translates to: SCTRPFLGPSNSKYLKGNRSPGG*LSSQAH
Trigger: GTGGGCTTGGCTCGAAAGTCAGCCGCCAGGACTCCT...ATTACCTTTCAAATATTTACTGTTGCTTGGCCCCAAGAATGGCCTTGTACAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS-3UTR TCA 90 bp AGTGGACATAACATTAGAATCCTAATAGACATTCTGGATAAGTTGTACAAGGCCTGTGATGCTGAGGCGTaGACGTCCCCAGGCTGCGCG +
Preference number: 4 (lower is better)
Translates to: SGHNIRILIDILDKLYKACDAEA*TSPGCA
Trigger: CGCGCAGCCTGGGGACGTTCACGCCTCAGCATCACA...GGCCTTGTACAACTTATCCAGAATGTCTATTAGGATTCTAATGTTATGTCCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS-3UTR TCA 90 bp CAGCCTTCTTTGAGTTACCAAATGCCTGAAGGTAGTACCACACCCCCTGGCCCCTTCAGCAACCTCATCTaGAATTTGACCTCCAAATGT +
Preference number: 4 (lower is better)
Translates to: QPSLSYQMPEGSTTPPGPFSNLI*NLTSKC
Trigger: ACATTTGGAGGTCAAATTTCAGATGAGGTTGCTGAA...GGGGCCAGGGGGTGTGGTACTACCTTCAGGCATTTGGTAACTCAAAGAAGGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR TCA 90 bp CTGAAGGTAGTACCACACCCCCTGGCCCCCATATTCTTCCCATTGCATAAGCATCCGGTGGGATCATATTaGACTGTCTTGCTACAGAAT +
Preference number: 4 (lower is better)
Translates to: LKVVPHPLAPIFFPLHKHPVGSY*TVLLQN
Trigger: ATTCTGTAGCAAGACAGTTCAATATGATCCCACCGG...ATGCTTATGCAATGGGAAGAATATGGGGGCCAGGGGGTGTGGTACTACCTTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR TCA 90 bp AACACCTTTCTGTACTGGGCACAGGCCGCTATTTTAACCATGCAGCTTCTGTGGCGTATTTTCCTGAGATaGTTCCACAGGCAAGTGGAG +
Preference number: 4 (lower is better)
Translates to: NTFLYWAQAAILTMQLLWRIFLR*FHRQVE
Trigger: CTCCACTTGCCTGTGGAATCATCTCAGGAAAATACG...CCACAGAAGCTGCATGGTTAAAATAGCGGCCTGTGCCCAGTACAGAAAGGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR TCA 90 bp CCTTCTTTGAGTTACCAAATGCCTGAAGGTAGTACCACACCCCCTGGCCCCCATCTCATTTACCACATGTaGTGTCATCTTTGGGAGAAC +
Preference number: 4 (lower is better)
Translates to: PSLSYQMPEGSTTPPGPHLIYHM*CHLWEN
Trigger: GTTCTCCCAAAGATGACATCACATGTGGTAAATGAG...ATGGGGGCCAGGGGGTGTGGTACTACCTTCAGGCATTTGGTAACTCAAAGAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR TCA 90 bp CAGACACCTCAAAGAATCCAGGGAGGGACACTAGAGGTTGAGCAGCAAGCTGCTCAGCAAGCTGCTAAGTaGTTCAAAAGACTGGTTAGT +
Preference number: 4 (lower is better)
Translates to: QTPQRIQGGTLEVEQQAAQQAAK*FKRLVS
Trigger: ACTAACCAGTCTTTTGAATCACTTAGCAGCTTGCTG...AGCAGCTTGCTGCTCAACCTCTAGTGTCCCTCCCTGGATTCTTTGAGGTGTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR TCA 90 bp CAGACACCTCAAAGAATCCAGGGAGGGACACTAGAGGTTGAGCAGCAAGCTGCTGGATTTTCTTGGTTGTaGGTTTTCAGATGTGCACAG +
Preference number: 4 (lower is better)
Translates to: QTPQRIQGGTLEVEQQAAGFSWL*VFRCAQ
Trigger: CTGTGCACATCTGAAAACTCACAACCAAGAAAATCC...AGCAGCTTGCTGCTCAACCTCTAGTGTCCCTCCCTGGATTCTTTGAGGTGTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR TCA 90 bp CCTTCTTTGAGTTACCAAATGCCTGAAGGTAGTACCACACCCCCTGGCCCCCATAGAAACTCTGAGTCCTaGTTTTCCAAGATTCCTGTG +
Preference number: 4 (lower is better)
Translates to: PSLSYQMPEGSTTPPGPHRNSES*FSKIPV
Trigger: CACAGGAATCTTGGAAAATCAGGACTCAGAGTTTCT...ATGGGGGCCAGGGGGTGTGGTACTACCTTCAGGCATTTGGTAACTCAAAGAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000389636.9
ENST00000490337.6
CDS-3UTR GCA 90 bp GTTGTGAGTTTTCAGATGTGCACAGTGGTAGCGACAGCAGACACCTCAAAGAATCTTGCACCAGGCTCTTaGTGTAACAAATCGGGAGGG +
Preference number: 4 (lower is better)
Translates to: VVSFQMCTVVATADTSKNLAPGS*CNKSGG
Trigger: CCCTCCCGATTTGTTACAGCAAGAGCCTGGTGCAAG...ATTCTTTGAGGTGTCTGCTGTCGCTACCACTGTGCACATCTGAAAACTCACAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS-3UTR GCA 90 bp CTTGATGATGCTCCCCAGAATCACTTCAGCCTTTCCAGCAGCATAGACTTCGGCTATTTCATGCCAGTCTaGTTTGCGGTGGACTCTTTG +
Preference number: 4 (lower is better)
Translates to: LDDAPQNHFSLSSSIDFGYFMPV*FAVDSL
Trigger: CAAAGAGTCCACCGCAAAGCAGACTGGCATGAAATA...GCCGAAGTCTATGCTGCTGGAAAGGCTGAAGTGATTCTGGGGAGCATCATCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489036.5
CDS-3UTR GCA 90 bp CTGAAGGTAGTACCACACCCCCTGGCCCCCATATTCTTCCCATTGCATAAGCATGATTCCTATATTTCATaGCAGTCTGCTTTGCGGTGG +
Preference number: 4 (lower is better)
Translates to: LKVVPHPLAPIFFPLHKHDSYIS*QSALRW
Trigger: CCACCGCAAAGCAGACTGGCATGAAATATAGGAATC...ATGCTTATGCAATGGGAAGAATATGGGGGCCAGGGGGTGTGGTACTACCTTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS-3UTR GCA 90 bp AACACCTTTCTGTACTGGGCACAGGCCGCTATTTTAACCATGCAGCTTCTGTGGCCCAGTACATCGCCATaGCTTGGTTTATCACATGTG +
Preference number: 4 (lower is better)
Translates to: NTFLYWAQAAILTMQLLWPSTSP*LGLSHV
Trigger: CACATGTGATAAACCAAGGCATGGCGATGTACTGGG...CCACAGAAGCTGCATGGTTAAAATAGCGGCCTGTGCCCAGTACAGAAAGGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR GCA 90 bp TCTTTGAGTTACCAAATGCCTGAAGGTAGTACCACACCCCCTGGCCCCCATATTCCCAGTACATCGCCATaGCTTGGTTTATCACATGTG +
Preference number: 4 (lower is better)
Translates to: SLSYQMPEGSTTPPGPHIPSTSP*LGLSHV
Trigger: CACATGTGATAAACCAAGGCATGGCGATGTACTGGG...AATATGGGGGCCAGGGGGTGTGGTACTACCTTCAGGCATTTGGTAACTCAAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR GCA 90 bp CCTTCTTTGAGTTACCAAATGCCTGAAGGTAGTACCACACCCCCTGGCCCCCATTGCTGTAGGGCTTGTTaGGCAGTATGTTATCAATCT +
Preference number: 4 (lower is better)
Translates to: PSLSYQMPEGSTTPPGPHCCRAC*AVCYQS
Trigger: AGATTGATAACATACTGCGCAACAAGCCCTACAGCA...ATGGGGGCCAGGGGGTGTGGTACTACCTTCAGGCATTTGGTAACTCAAAGAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR GCA 90 bp TCTTTGAGTTACCAAATGCCTGAAGGTAGTACCACACCCCCTGGCCCCCATATTGTGAGTTTTCAGATGTaGACAGTGGTAGCGACAGCA +
Preference number: 4 (lower is better)
Translates to: SLSYQMPEGSTTPPGPHIVSFQM*TVVATA
Trigger: TGCTGTCGCTACCACTGTGCACATCTGAAAACTCAC...AATATGGGGGCCAGGGGGTGTGGTACTACCTTCAGGCATTTGGTAACTCAAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR GCA 90 bp TACTGGGCACAGGCCGCTATTTTAACCATGCAGCTTCTGTGGTTCATGCATTGCGTGAGTTTTCAGATGTaGACAGTGGTAGCGACAGCA +
Preference number: 4 (lower is better)
Translates to: YWAQAAILTMQLLWFMHCVSFQM*TVVATA
Trigger: TGCTGTCGCTACCACTGTGCACATCTGAAAACTCAC...GCAATGCATGAACCACAGAAGCTGCATGGTTAAAATAGCGGCCTGTGCCCAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR GCA 90 bp CAGCCTTCTTTGAGTTACCAAATGCCTGAAGGTAGTACCACACCCCCTGGCCCCAACTTGCAGAAGTTGTaGCTACAAGCAGTTGAAAGT +
Preference number: 4 (lower is better)
Translates to: QPSLSYQMPEGSTTPPGPNLQKL*LQAVES
Trigger: ACTTTCAACTGCTTGTAGGCACAACTTCTGCAAGTT...GGGGCCAGGGGGTGTGGTACTACCTTCAGGCATTTGGTAACTCAAAGAAGGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000302490.12
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR GCA 90 bp AACACCTTTCTGTACTGGGCACAGGCCGCTATTTTAACCATGCAGCTTCTGTGGACCTCAGATTTCGAGTaGAACAAGGGTAAGCCCCAT +
Preference number: 4 (lower is better)
Translates to: NTFLYWAQAAILTMQLLWTSDFE*NKGKPH
Trigger: ATGGGGCTTACCCTTGTTGCACTCGAAATCTGAGGT...CCACAGAAGCTGCATGGTTAAAATAGCGGCCTGTGCCCAGTACAGAAAGGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302490.12
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR CCA 90 bp TCTTTGAGTTACCAAATGCCTGAAGGTAGTACCACACCCCCTGGCCCCCATATTGCCAAATCCATGCAGTaGGGGAGGTTTTTACAGAAG +
Preference number: 4 (lower is better)
Translates to: SLSYQMPEGSTTPPGPHIAKSMQ*GRFLQK
Trigger: CTTCTGTAAAAACCTCCCCCACTGCATGGATTTGGC...AATATGGGGGCCAGGGGGTGTGGTACTACCTTCAGGCATTTGGTAACTCAAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS-3UTR CCA 90 bp TCTTTGAGTTACCAAATGCCTGAAGGTAGTACCACACCCCCTGGCCCCCATATTCACTTTCATAGGCGATaGTCATCAGCCGTTCAGCAA +
Preference number: 4 (lower is better)
Translates to: SLSYQMPEGSTTPPGPHIHFHRR*SSAVQQ
Trigger: TTGCTGAACGGCTGATGACCATCGCCTATGAAAGTG...AATATGGGGGCCAGGGGGTGTGGTACTACCTTCAGGCATTTGGTAACTCAAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR CCA 90 bp GTTGTGAGTTTTCAGATGTGCACAGTGGTAGCGACAGCAGACACCTCAAAGAATACTTCAGTGAAGCCCTaGAACTTTCAGGCACCCCGT +
Preference number: 4 (lower is better)
Translates to: VVSFQMCTVVATADTSKNTSVKP*NFQAPR
Trigger: ACGGGGTGCCTGAAAGTTCCAGGGCTTCACTGAAGT...ATTCTTTGAGGTGTCTGCTGTCGCTACCACTGTGCACATCTGAAAACTCACAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR CCA 90 bp ATCACATTTCCCATTAGACAGCACCTCAGCTCCTCTATACATACAGCAGTTCGCACTTCAGTGAAGCCCTaGAACTTTCAGGCACCCCGT +
Preference number: 4 (lower is better)
Translates to: ITFPIRQHLSSSIHTAVRTSVKP*NFQAPR
Trigger: ACGGGGTGCCTGAAAGTTCCAGGGCTTCACTGAAGT...GCGAACTGCTGTATGTATAGAGGAGCTGAGGTGCTGTCTAATGGGAAATGTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302490.12
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR CCA 90 bp CTGAAGGTAGTACCACACCCCCTGGCCCCCATATTCTTCCCATTGCATAAGCATGTACAAGGCCATTCTTaGGGCCAAGCAACAGTAAAT +
Preference number: 4 (lower is better)
Translates to: LKVVPHPLAPIFFPLHKHVQGHS*GQATVN
Trigger: ATTTACTGTTGCTTGGCCCCAAGAATGGCCTTGTAC...ATGCTTATGCAATGGGAAGAATATGGGGGCCAGGGGGTGTGGTACTACCTTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000302490.12
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR CCA 90 bp CAGCCTTCTTTGAGTTACCAAATGCCTGAAGGTAGTACCACACCCCCTGGCCCCCATACAGCAGTTCGCTaGATTGAATACACAATGAAC +
Preference number: 4 (lower is better)
Translates to: QPSLSYQMPEGSTTPPGPHTAVR*IEYTMN
Trigger: GTTCATTGTGTATTCAATCCAGCGAACTGCTGTATG...GGGGCCAGGGGGTGTGGTACTACCTTCAGGCATTTGGTAACTCAAAGAAGGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000302490.12
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR CCA 90 bp CAGACACCTCAAAGAATCCAGGGAGGGACACTAGAGGTTGAGCAGCAAGCTGCTACTGTCTCCTTAACTTaGTGTTCTCCTCTGAGATCT +
Preference number: 4 (lower is better)
Translates to: QTPQRIQGGTLEVEQQAATVSLT*CSPLRS
Trigger: AGATCTCAGAGGAGAACACCAAGTTAAGGAGACAGT...AGCAGCTTGCTGCTCAACCTCTAGTGTCCCTCCCTGGATTCTTTGAGGTGTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389636.9
ENST00000490337.6
CDS-3UTR TCA 90 bp CAGACACCTCAAAGAATCCAGGGAGGGACACTAGAGGTTGAGCAGCAAGCTGCTTTCAGCAACCTCATCTaGAATTTGACCTCCAAATGT +
Preference number: 4 (lower is better)
Translates to: QTPQRIQGGTLEVEQQAAFSNLI*NLTSKC
Trigger: ACATTTGGAGGTCAAATTTCAGATGAGGTTGCTGAA...AGCAGCTTGCTGCTCAACCTCTAGTGTCCCTCCCTGGATTCTTTGAGGTGTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR TCA 90 bp TCTTTGAGTTACCAAATGCCTGAAGGTAGTACCACACCCCCTGGCCCCCATATTCCGGTGGGATCATATTaGACTGTCTTGCTACAGAAT +
Preference number: 4 (lower is better)
Translates to: SLSYQMPEGSTTPPGPHIPVGSY*TVLLQN
Trigger: ATTCTGTAGCAAGACAGTTCAATATGATCCCACCGG...AATATGGGGGCCAGGGGGTGTGGTACTACCTTCAGGCATTTGGTAACTCAAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR TCA 90 bp TACTGGGCACAGGCCGCTATTTTAACCATGCAGCTTCTGTGGTTCATGCATTGCCCGGTGGGATCATATTaGACTGTCTTGCTACAGAAT +
Preference number: 4 (lower is better)
Translates to: YWAQAAILTMQLLWFMHCPVGSY*TVLLQN
Trigger: ATTCTGTAGCAAGACAGTTCAATATGATCCCACCGG...GCAATGCATGAACCACAGAAGCTGCATGGTTAAAATAGCGGCCTGTGCCCAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR TCA 90 bp TCTTTGAGTTACCAAATGCCTGAAGGTAGTACCACACCCCCTGGCCCCCATATTGTTTCCGTATTTTCCTaGGATGATTCCACAGGCAAG +
Preference number: 4 (lower is better)
Translates to: SLSYQMPEGSTTPPGPHIVSVFS*DDSTGK
Trigger: CTTGCCTGTGGAATCATCTCAGGAAAATACGGAAAC...AATATGGGGGCCAGGGGGTGTGGTACTACCTTCAGGCATTTGGTAACTCAAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR TCA 90 bp TACTGGGCACAGGCCGCTATTTTAACCATGCAGCTTCTGTGGTTCATGCATTGCGTTTCCGTATTTTCCTaGGATGATTCCACAGGCAAG +
Preference number: 4 (lower is better)
Translates to: YWAQAAILTMQLLWFMHCVSVFS*DDSTGK
Trigger: CTTGCCTGTGGAATCATCTCAGGAAAATACGGAAAC...GCAATGCATGAACCACAGAAGCTGCATGGTTAAAATAGCGGCCTGTGCCCAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR TCA 90 bp ATCACATTTCCCATTAGACAGCACCTCAGCTCCTCTATACATACAGCAGTTCGCTTGTTCAGGAGTGGATaGTCCCAGGAGCACAGAACT +
Preference number: 4 (lower is better)
Translates to: ITFPIRQHLSSSIHTAVRLFRSG*SQEHRT
Trigger: AGTTCTGTGCTCCTGGGATCATCCACTCCTGAACAA...GCGAACTGCTGTATGTATAGAGGAGCTGAGGTGCTGTCTAATGGGAAATGTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302490.12
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR TCA 90 bp TACTGGGCACAGGCCGCTATTTTAACCATGCAGCTTCTGTGGTTCATGCATTGCCACCAAGGTTTTCAATaGGTTGTTCAGGAGTGGATG +
Preference number: 4 (lower is better)
Translates to: YWAQAAILTMQLLWFMHCHQGFQ*VVQEWM
Trigger: CATCCACTCCTGAACAACTCATTGAAAACCTTGGTG...GCAATGCATGAACCACAGAAGCTGCATGGTTAAAATAGCGGCCTGTGCCCAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR TCA 90 bp TCTTTGAGTTACCAAATGCCTGAAGGTAGTACCACACCCCCTGGCCCCCATATTCACCAAGGTTTTCAATaGGTTGTTCAGGAGTGGATG +
Preference number: 4 (lower is better)
Translates to: SLSYQMPEGSTTPPGPHIHQGFQ*VVQEWM
Trigger: CATCCACTCCTGAACAACTCATTGAAAACCTTGGTG...AATATGGGGGCCAGGGGGTGTGGTACTACCTTCAGGCATTTGGTAACTCAAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR TCA 90 bp CAGACACCTCAAAGAATCCAGGGAGGGACACTAGAGGTTGAGCAGCAAGCTGCTTCATGCATTGCCTTATaGTCTATAGTCCTTCTTGCT +
Preference number: 4 (lower is better)
Translates to: QTPQRIQGGTLEVEQQAASCIAL*SIVLLA
Trigger: AGCAAGAAGGACTATAGATCATAAGGCAATGCATGA...AGCAGCTTGCTGCTCAACCTCTAGTGTCCCTCCCTGGATTCTTTGAGGTGTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR GCA 90 bp ACACCTCAGATTTCGAGTGCAACAAGGGTAAGCCCCATTAATCCATGCAAAGAACTTGCACCAGGCTCTTaGTGTAACAAATCGGGAGGG +
Preference number: 4 (lower is better)
Translates to: TPQISSATRVSPINPCKELAPGS*CNKSGG
Trigger: CCCTCCCGATTTGTTACAGCAAGAGCCTGGTGCAAG...TTCTTTGCATGGATTAATGGGGCTTACCCTTGTTGCACTCGAAATCTGAGGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS-3UTR GCA 90 bp TACTGGGCACAGGCCGCTATTTTAACCATGCAGCTTCTGTGGTTCATGCATTGCTCAAATTGTGCTCTGTaGAGGCTATGGAGACTTGCA +
Preference number: 4 (lower is better)
Translates to: YWAQAAILTMQLLWFMHCSNCAL*RLWRLA
Trigger: TGCAAGTCTCCATAGCCTGCACAGAGCACAATTTGA...GCAATGCATGAACCACAGAAGCTGCATGGTTAAAATAGCGGCCTGTGCCCAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS-3UTR GCA 90 bp TACTGGGCACAGGCCGCTATTTTAACCATGCAGCTTCTGTGGTTCATGCATTGCTATTTCATGCCAGTCTaGTTTGCGGTGGACTCTTTG +
Preference number: 4 (lower is better)
Translates to: YWAQAAILTMQLLWFMHCYFMPV*FAVDSL
Trigger: CAAAGAGTCCACCGCAAAGCAGACTGGCATGAAATA...GCAATGCATGAACCACAGAAGCTGCATGGTTAAAATAGCGGCCTGTGCCCAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS-3UTR GCA 90 bp CAGCCTTCTTTGAGTTACCAAATGCCTGAAGGTAGTACCACACCCCCTGGCCCCCATATTGAACTGTCTTaGTACAGAATAGGCTTCCAT +
Preference number: 4 (lower is better)
Translates to: QPSLSYQMPEGSTTPPGPHIELS*YRIGFH
Trigger: ATGGAAGCCTATTCTGTAGCAAGACAGTTCAATATG...GGGGCCAGGGGGTGTGGTACTACCTTCAGGCATTTGGTAACTCAAAGAAGGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR GCA 90 bp TCTTTGAGTTACCAAATGCCTGAAGGTAGTACCACACCCCCTGGCCCCCATATTTGGAGACCATGTCATTaGGCCAACACCTATTTTGTG +
Preference number: 4 (lower is better)
Translates to: SLSYQMPEGSTTPPGPHIWRPCH*ANTYFV
Trigger: CACAAAATAGGTGTTGGCGCAATGACATGGTCTCCA...AATATGGGGGCCAGGGGGTGTGGTACTACCTTCAGGCATTTGGTAACTCAAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR GCA 90 bp TACTGGGCACAGGCCGCTATTTTAACCATGCAGCTTCTGTGGTTCATGCATTGCTGGAGACCATGTCATTaGGCCAACACCTATTTTGTG +
Preference number: 4 (lower is better)
Translates to: YWAQAAILTMQLLWFMHCWRPCH*ANTYFV
Trigger: CACAAAATAGGTGTTGGCGCAATGACATGGTCTCCA...GCAATGCATGAACCACAGAAGCTGCATGGTTAAAATAGCGGCCTGTGCCCAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR GCA 90 bp CCTTCTTTGAGTTACCAAATGCCTGAAGGTAGTACCACACCCCCTGGCCCCCATCTGTGGTTCATGCATTaGCTTATGATCTATAGTCCT +
Preference number: 4 (lower is better)
Translates to: PSLSYQMPEGSTTPPGPHLWFMH*LMIYSP
Trigger: AGGACTATAGATCATAAGGCAATGCATGAACCACAG...ATGGGGGCCAGGGGGTGTGGTACTACCTTCAGGCATTTGGTAACTCAAAGAAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR GCA 90 bp CAGACACCTCAAAGAATCCAGGGAGGGACACTAGAGGTTGAGCAGCAAGCTGCTAACTTGCAGAAGTTGTaGCTACAAGCAGTTGAAAGT +
Preference number: 4 (lower is better)
Translates to: QTPQRIQGGTLEVEQQAANLQKL*LQAVES
Trigger: ACTTTCAACTGCTTGTAGGCACAACTTCTGCAAGTT...AGCAGCTTGCTGCTCAACCTCTAGTGTCCCTCCCTGGATTCTTTGAGGTGTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302490.12
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR GCA 90 bp AGTTGTACAAGGCCATTCTTGGGGCCAAGCAACAGTAAATATTTGAAAGGTAATTGCCCCTGTCCGGGCTaGCAGCATCGTGGAGATCTT +
Preference number: 4 (lower is better)
Translates to: SCTRPFLGPSNSKYLKGNCPCPG*QHRGDL
Trigger: AAGATCTCCACGATGCTGGCAGCCCGGACAGGGGCA...ATTACCTTTCAAATATTTACTGTTGCTTGGCCCCAAGAATGGCCTTGTACAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490337.6
CDS-3UTR GCA 90 bp AGTTGTACAAGGCCATTCTTGGGGCCAAGCAACAGTAAATATTTGAAAGGTAATAAGGCAGAGAGGGGGTaGTTATGCCGCGGAACACGC +
Preference number: 4 (lower is better)
Translates to: SCTRPFLGPSNSKYLKGNKAERG*LCRGTR
Trigger: GCGTGTTCCGCGGCATAAGCACCCCCTCTCTGCCTT...ATTACCTTTCAAATATTTACTGTTGCTTGGCCCCAAGAATGGCCTTGTACAACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000618897.4
CDS-3UTR CCA 90 bp AGTGGACATAACATTAGAATCCTAATAGACATTCTGGATAAGTTGTACAAGGCCGGCAGGATGCTCAACTaGCGCGCGGAGCATCCCAAG +
Preference number: 4 (lower is better)
Translates to: SGHNIRILIDILDKLYKAGRMLN*RAEHPK
Trigger: CTTGGGATGCTCCGCGCGCCAGTTGAGCATCCTGCC...GGCCTTGTACAACTTATCCAGAATGTCTATTAGGATTCTAATGTTATGTCCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS-3UTR CCA 90 bp CTGGCCCCCATATTCTTCCCATTGCATAAGCATGAGGTGTATACAGCAATGCAAAGTTGTCACAGCAGCTaGAGGGAGAATCAGGTTTGC +
Preference number: 4 (lower is better)
Translates to: LAPIFFPLHKHEVYTAMQSCHSS*RENQVC
Trigger: GCAAACCTGATTCTCCCTCCAGCTGCTGTGACAACT...TTGCATTGCTGTATACACCTCATGCTTATGCAATGGGAAGAATATGGGGGCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS-3UTR CCA 90 bp ATCACATTTCCCATTAGACAGCACCTCAGCTCCTCTATACATACAGCAGTTCGCAGTTGTCACAGCAGCTaGAGGGAGAATCAGGTTTGC +
Preference number: 4 (lower is better)
Translates to: ITFPIRQHLSSSIHTAVRSCHSS*RENQVC
Trigger: GCAAACCTGATTCTCCCTCCAGCTGCTGTGACAACT...GCGAACTGCTGTATGTATAGAGGAGCTGAGGTGCTGTCTAATGGGAAATGTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS-3UTR CCA 90 bp ATGGCTCGGACAATTTCTTCCATGGGAGTGTTACTGTCCGGTCGATTTGCAAAGCACTTTCATAGGCGATaGTCATCAGCCGTTCAGCAA +
Preference number: 4 (lower is better)
Translates to: MARTISSMGVLLSGRFAKHFHRR*SSAVQQ
Trigger: TTGCTGAACGGCTGATGACCATCGCCTATGAAAGTG...CTTTGCAAATCGACCGGACAGTAACACTCCCATGGAAGAAATTGTCCGAGCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489036.5
CDS-3UTR CCA 90 bp ATGGCTCGGACAATTTCTTCCATGGGAGTGTTACTGTCCGGTCGATTTGCAAAGGGACAATTTCTTCCATaGGAGTGTTACTGTCCGGTC +
Preference number: 4 (lower is better)
Translates to: MARTISSMGVLLSGRFAKGQFLP*ECYCPV
Trigger: GACCGGACAGTAACACTCCCATGGAAGAAATTGTCC...CTTTGCAAATCGACCGGACAGTAACACTCCCATGGAAGAAATTGTCCGAGCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489036.5
CDS-3UTR CCA 90 bp ACACCTCAGATTTCGAGTGCAACAAGGGTAAGCCCCATTAATCCATGCAAAGAAACTTCAGTGAAGCCCTaGAACTTTCAGGCACCCCGT +
Preference number: 4 (lower is better)
Translates to: TPQISSATRVSPINPCKETSVKP*NFQAPR
Trigger: ACGGGGTGCCTGAAAGTTCCAGGGCTTCACTGAAGT...TTCTTTGCATGGATTAATGGGGCTTACCCTTGTTGCACTCGAAATCTGAGGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302490.12
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR CCA 90 bp TCTTTGAGTTACCAAATGCCTGAAGGTAGTACCACACCCCCTGGCCCCCATATTACCATGCAGCTTCTGTaGTTCATGCATTGCCTTATG +
Preference number: 4 (lower is better)
Translates to: SLSYQMPEGSTTPPGPHITMQLL*FMHCLM
Trigger: CATAAGGCAATGCATGAACCACAGAAGCTGCATGGT...AATATGGGGGCCAGGGGGTGTGGTACTACCTTCAGGCATTTGGTAACTCAAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR CCA 90 bp TCTTTGAGTTACCAAATGCCTGAAGGTAGTACCACACCCCCTGGCCCCCATATTAACACCTTTCTGTACTaGGCACAGGCCGCTATTTTA +
Preference number: 4 (lower is better)
Translates to: SLSYQMPEGSTTPPGPHINTFLY*AQAAIL
Trigger: TAAAATAGCGGCCTGTGCCCAGTACAGAAAGGTGTT...AATATGGGGGCCAGGGGGTGTGGTACTACCTTCAGGCATTTGGTAACTCAAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR CCA 90 bp AACACCTTTCTGTACTGGGCACAGGCCGCTATTTTAACCATGCAGCTTCTGTGGAACACCTTTCTGTACTaGGCACAGGCCGCTATTTTA +
Preference number: 4 (lower is better)
Translates to: NTFLYWAQAAILTMQLLWNTFLY*AQAAIL
Trigger: TAAAATAGCGGCCTGTGCCCAGTACAGAAAGGTGTT...CCACAGAAGCTGCATGGTTAAAATAGCGGCCTGTGCCCAGTACAGAAAGGTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR CCA 90 bp TACCACACCCCCTGGCCCCCATATTCTTCCCATTGCATAAGCATGAGGTGTATAAACACCTTTCTGTACTaGGCACAGGCCGCTATTTTA +
Preference number: 4 (lower is better)
Translates to: YHTPWPPYSSHCISMRCINTFLY*AQAAIL
Trigger: TAAAATAGCGGCCTGTGCCCAGTACAGAAAGGTGTT...TATACACCTCATGCTTATGCAATGGGAAGAATATGGGGGCCAGGGGGTGTGGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR CCA 90 bp CTGAAGGTAGTACCACACCCCCTGGCCCCCATATTCTTCCCATTGCATAAGCATATACCTTGGGTTATCTaGCTTCAGTATGTCCCTCAA +
Preference number: 4 (lower is better)
Translates to: LKVVPHPLAPIFFPLHKHIPWVI*LQYVPQ
Trigger: TTGAGGGACATACTGAAGCCAGATAACCCAAGGTAT...ATGCTTATGCAATGGGAAGAATATGGGGGCCAGGGGGTGTGGTACTACCTTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000471742.5
CDS-3UTR TCA 90 bp CTGGCCCCCATATTCTTCCCATTGCATAAGCATGAGGTGTATACAGCAATGCAATTGCGGTGGACTCTTTaGGAGAAATGTGATGCTGAG +
Preference number: 4 (lower is better)
Translates to: LAPIFFPLHKHEVYTAMQLRWTL*EKCDAE
Trigger: CTCAGCATCACATTTCTCTCAAAGAGTCCACCGCAA...TTGCATTGCTGTATACACCTCATGCTTATGCAATGGGAAGAATATGGGGGCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS-3UTR TCA 90 bp TACTGGGCACAGGCCGCTATTTTAACCATGCAGCTTCTGTGGTTCATGCATTGCACCTCATCTGAAATTTaGCCTCCAAATGTCACCCAT +
Preference number: 4 (lower is better)
Translates to: YWAQAAILTMQLLWFMHCTSSEI*PPNVTH
Trigger: ATGGGTGACATTTGGAGGTCAAATTTCAGATGAGGT...GCAATGCATGAACCACAGAAGCTGCATGGTTAAAATAGCGGCCTGTGCCCAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR TCA 90 bp CCTTCTTTGAGTTACCAAATGCCTGAAGGTAGTACCACACCCCCTGGCCCCCATAATAATATGCTTTCTTaGCAGCCCTCTTTCTGTTTC +
Preference number: 4 (lower is better)
Translates to: PSLSYQMPEGSTTPPGPHNNMLS*QPSFCF
Trigger: GAAACAGAAAGAGGGCTGTCAAGAAAGCATATTATT...ATGGGGGCCAGGGGGTGTGGTACTACCTTCAGGCATTTGGTAACTCAAAGAAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR TCA 90 bp GTTGTGAGTTTTCAGATGTGCACAGTGGTAGCGACAGCAGACACCTCAAAGAATCGTATTTTCCTGAGATaGTTCCACAGGCAAGTGGAG +
Preference number: 4 (lower is better)
Translates to: VVSFQMCTVVATADTSKNRIFLR*FHRQVE
Trigger: CTCCACTTGCCTGTGGAATCATCTCAGGAAAATACG...ATTCTTTGAGGTGTCTGCTGTCGCTACCACTGTGCACATCTGAAAACTCACAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR TCA 90 bp AACACCTTTCTGTACTGGGCACAGGCCGCTATTTTAACCATGCAGCTTCTGTGGCTCATTTACCACATGTaGTGTCATCTTTGGGAGAAC +
Preference number: 4 (lower is better)
Translates to: NTFLYWAQAAILTMQLLWLIYHM*CHLWEN
Trigger: GTTCTCCCAAAGATGACATCACATGTGGTAAATGAG...CCACAGAAGCTGCATGGTTAAAATAGCGGCCTGTGCCCAGTACAGAAAGGTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR TCA 90 bp AACACCTTTCTGTACTGGGCACAGGCCGCTATTTTAACCATGCAGCTTCTGTGGCAGCAAGCTGCTAAGTaGTTCAAAAGACTGGTTAGT +
Preference number: 4 (lower is better)
Translates to: NTFLYWAQAAILTMQLLWQQAAK*FKRLVS
Trigger: ACTAACCAGTCTTTTGAATCACTTAGCAGCTTGCTG...CCACAGAAGCTGCATGGTTAAAATAGCGGCCTGTGCCCAGTACAGAAAGGTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR TCA 90 bp TACTGGGCACAGGCCGCTATTTTAACCATGCAGCTTCTGTGGTTCATGCATTGCCAATGCAAGAATAGGTaGCTCCAGTCCAAGATAAGA +
Preference number: 4 (lower is better)
Translates to: YWAQAAILTMQLLWFMHCQCKNR*LQSKIR
Trigger: TCTTATCTTGGACTGGAGTCACCTATTCTTGCATTG...GCAATGCATGAACCACAGAAGCTGCATGGTTAAAATAGCGGCCTGTGCCCAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR TCA 90 bp TACCACACCCCCTGGCCCCCATATTCTTCCCATTGCATAAGCATGAGGTGTATACAATGCAAGAATAGGTaGCTCCAGTCCAAGATAAGA +
Preference number: 4 (lower is better)
Translates to: YHTPWPPYSSHCISMRCIQCKNR*LQSKIR
Trigger: TCTTATCTTGGACTGGAGTCACCTATTCTTGCATTG...TATACACCTCATGCTTATGCAATGGGAAGAATATGGGGGCCAGGGGGTGTGGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR TCA 90 bp CAGACACCTCAAAGAATCCAGGGAGGGACACTAGAGGTTGAGCAGCAAGCTGCTTCCAAGCAAGACTTTTaGGTGAAGATACTGCTTTTT +
Preference number: 4 (lower is better)
Translates to: QTPQRIQGGTLEVEQQAASKQDF*VKILLF
Trigger: AAAAAGCAGTATCTTCACTCAAAAGTCTTGCTTGGA...AGCAGCTTGCTGCTCAACCTCTAGTGTCCCTCCCTGGATTCTTTGAGGTGTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR TCA 90 bp TACCACACCCCCTGGCCCCCATATTCTTCCCATTGCATAAGCATGAGGTGTATAAGCAGTTCGCTGGATTaGATACACAATGAACAACTG +
Preference number: 4 (lower is better)
Translates to: YHTPWPPYSSHCISMRCISSSLD*IHNEQL
Trigger: CAGTTGTTCATTGTGTATTCAATCCAGCGAACTGCT...TATACACCTCATGCTTATGCAATGGGAAGAATATGGGGGCCAGGGGGTGTGGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000302490.12
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR GCA 90 bp CTGGCCCCCATATTCTTCCCATTGCATAAGCATGAGGTGTATACAGCAATGCAACCCAGTACATCGCCATaGCTTGGTTTATCACATGTG +
Preference number: 4 (lower is better)
Translates to: LAPIFFPLHKHEVYTAMQPSTSP*LGLSHV
Trigger: CACATGTGATAAACCAAGGCATGGCGATGTACTGGG...TTGCATTGCTGTATACACCTCATGCTTATGCAATGGGAAGAATATGGGGGCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR GCA 90 bp CAGACACCTCAAAGAATCCAGGGAGGGACACTAGAGGTTGAGCAGCAAGCTGCTCATATTGAACTGTCTTaGTACAGAATAGGCTTCCAT +
Preference number: 4 (lower is better)
Translates to: QTPQRIQGGTLEVEQQAAHIELS*YRIGFH
Trigger: ATGGAAGCCTATTCTGTAGCAAGACAGTTCAATATG...AGCAGCTTGCTGCTCAACCTCTAGTGTCCCTCCCTGGATTCTTTGAGGTGTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR GCA 90 bp TACTGGGCACAGGCCGCTATTTTAACCATGCAGCTTCTGTGGTTCATGCATTGCTGCTGTAGGGCTTGTTaGGCAGTATGTTATCAATCT +
Preference number: 4 (lower is better)
Translates to: YWAQAAILTMQLLWFMHCCCRAC*AVCYQS
Trigger: AGATTGATAACATACTGCGCAACAAGCCCTACAGCA...GCAATGCATGAACCACAGAAGCTGCATGGTTAAAATAGCGGCCTGTGCCCAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR GCA 90 bp ATCACATTTCCCATTAGACAGCACCTCAGCTCCTCTATACATACAGCAGTTCGCGTGAGTTTTCAGATGTaGACAGTGGTAGCGACAGCA +
Preference number: 4 (lower is better)
Translates to: ITFPIRQHLSSSIHTAVRVSFQM*TVVATA
Trigger: TGCTGTCGCTACCACTGTGCACATCTGAAAACTCAC...GCGAACTGCTGTATGTATAGAGGAGCTGAGGTGCTGTCTAATGGGAAATGTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302490.12
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR GCA 90 bp GTTGTGAGTTTTCAGATGTGCACAGTGGTAGCGACAGCAGACACCTCAAAGAATGTGAGTTTTCAGATGTaGACAGTGGTAGCGACAGCA +
Preference number: 4 (lower is better)
Translates to: VVSFQMCTVVATADTSKNVSFQM*TVVATA
Trigger: TGCTGTCGCTACCACTGTGCACATCTGAAAACTCAC...ATTCTTTGAGGTGTCTGCTGTCGCTACCACTGTGCACATCTGAAAACTCACAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR GCA 90 bp TACTGGGCACAGGCCGCTATTTTAACCATGCAGCTTCTGTGGTTCATGCATTGCAGATTTGTCTTTCCCTaGTACAGAAAACCCAGACTG +
Preference number: 4 (lower is better)
Translates to: YWAQAAILTMQLLWFMHCRFVFP*YRKPRL
Trigger: CAGTCTGGGTTTTCTGTAGCAGGGAAAGACAAATCT...GCAATGCATGAACCACAGAAGCTGCATGGTTAAAATAGCGGCCTGTGCCCAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389636.9
ENST00000490337.6
CDS-3UTR CCA 90 bp AGTTGTACAAGGCCATTCTTGGGGCCAAGCAACAGTAAATATTTGAAAGGTAATATGCGGGCTCGCTTCTaGGCGATGGCTCAAATCAGC +
Preference number: 4 (lower is better)
Translates to: SCTRPFLGPSNSKYLKGNMRARF*AMAQIS
Trigger: GCTGATTTGAGCCATCGCCCAGAAGCGAGCCCGCAT...ATTACCTTTCAAATATTTACTGTTGCTTGGCCCCAAGAATGGCCTTGTACAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS-3UTR CCA 90 bp GATTTTCTTGGTTGTGAGTTTTCAGATGTGCACAGTGGTAGCGACAGCAGACACGCCAAATCCATGCAGTaGGGGAGGTTTTTACAGAAG +
Preference number: 4 (lower is better)
Translates to: DFLGCEFSDVHSGSDSRHAKSMQ*GRFLQK
Trigger: CTTCTGTAAAAACCTCCCCCACTGCATGGATTTGGC...GTGTCTGCTGTCGCTACCACTGTGCACATCTGAAAACTCACAACCAAGAAAATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS-3UTR CCA 90 bp AGTGGACATAACATTAGAATCCTAATAGACATTCTGGATAAGTTGTACAAGGCCCTGCGTTCACCACATTaGGGGCGGTGGAGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: SGHNIRILIDILDKLYKALRSPH*GRWSSA
Trigger: AGCAGAGCTCCACCGCCCCCAATGTGGTGAACGCAG...GGCCTTGTACAACTTATCCAGAATGTCTATTAGGATTCTAATGTTATGTCCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS-3UTR CCA 90 bp ATCACATTTCCCATTAGACAGCACCTCAGCTCCTCTATACATACAGCAGTTCGCGGACAATTTCTTCCATaGGAGTGTTACTGTCCGGTC +
Preference number: 4 (lower is better)
Translates to: ITFPIRQHLSSSIHTAVRGQFLP*ECYCPV
Trigger: GACCGGACAGTAACACTCCCATGGAAGAAATTGTCC...GCGAACTGCTGTATGTATAGAGGAGCTGAGGTGCTGTCTAATGGGAAATGTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302490.12
ENST00000471742.5
ENST00000490337.6
CDS-3UTR CCA 90 bp TACCACACCCCCTGGCCCCCATATTCTTCCCATTGCATAAGCATGAGGTGTATATACATCGCCATGCCTTaGTTTATCACATGTGTCATG +
Preference number: 4 (lower is better)
Translates to: YHTPWPPYSSHCISMRCIYIAMP*FITCVM
Trigger: CATGACACATGTGATAAACCAAGGCATGGCGATGTA...TATACACCTCATGCTTATGCAATGGGAAGAATATGGGGGCCAGGGGGTGTGGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR CCA 90 bp TCTTTGAGTTACCAAATGCCTGAAGGTAGTACCACACCCCCTGGCCCCCATATTTACATCGCCATGCCTTaGTTTATCACATGTGTCATG +
Preference number: 4 (lower is better)
Translates to: SLSYQMPEGSTTPPGPHIYIAMP*FITCVM
Trigger: CATGACACATGTGATAAACCAAGGCATGGCGATGTA...AATATGGGGGCCAGGGGGTGTGGTACTACCTTCAGGCATTTGGTAACTCAAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR CCA 90 bp AACACCTTTCTGTACTGGGCACAGGCCGCTATTTTAACCATGCAGCTTCTGTGGTACATCGCCATGCCTTaGTTTATCACATGTGTCATG +
Preference number: 4 (lower is better)
Translates to: NTFLYWAQAAILTMQLLWYIAMP*FITCVM
Trigger: CATGACACATGTGATAAACCAAGGCATGGCGATGTA...CCACAGAAGCTGCATGGTTAAAATAGCGGCCTGTGCCCAGTACAGAAAGGTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR CCA 90 bp CAGCCTTCTTTGAGTTACCAAATGCCTGAAGGTAGTACCACACCCCCTGGCCCCAGTGATTCAAAAGACTaGTTAGTAACACCTTTCTGT +
Preference number: 4 (lower is better)
Translates to: QPSLSYQMPEGSTTPPGPSDSKD*LVTPFC
Trigger: ACAGAAAGGTGTTACTAACCAGTCTTTTGAATCACT...GGGGCCAGGGGGTGTGGTACTACCTTCAGGCATTTGGTAACTCAAAGAAGGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR CCA 90 bp CAGACACCTCAAAGAATCCAGGGAGGGACACTAGAGGTTGAGCAGCAAGCTGCTGAACATTTGCCTTCCTaGGTATTTTACAGGTTTACT +
Preference number: 4 (lower is better)
Translates to: QTPQRIQGGTLEVEQQAAEHLPS*VFYRFT
Trigger: AGTAAACCTGTAAAATACCCAGGAAGGCAAATGTTC...AGCAGCTTGCTGCTCAACCTCTAGTGTCCCTCCCTGGATTCTTTGAGGTGTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302490.12
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR CCA 90 bp CCTTCTTTGAGTTACCAAATGCCTGAAGGTAGTACCACACCCCCTGGCCCCCATGAACATTTGCCTTCCTaGGTATTTTACAGGTTTACT +
Preference number: 4 (lower is better)
Translates to: PSLSYQMPEGSTTPPGPHEHLPS*VFYRFT
Trigger: AGTAAACCTGTAAAATACCCAGGAAGGCAAATGTTC...ATGGGGGCCAGGGGGTGTGGTACTACCTTCAGGCATTTGGTAACTCAAAGAAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000302490.12
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR CCA 90 bp CTGAAGGTAGTACCACACCCCCTGGCCCCCATATTCTTCCCATTGCATAAGCATCATACAGCAGTTCGCTaGATTGAATACACAATGAAC +
Preference number: 4 (lower is better)
Translates to: LKVVPHPLAPIFFPLHKHHTAVR*IEYTMN
Trigger: GTTCATTGTGTATTCAATCCAGCGAACTGCTGTATG...ATGCTTATGCAATGGGAAGAATATGGGGGCCAGGGGGTGTGGTACTACCTTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000302490.12
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR CCA 90 bp AGTGGACATAACATTAGAATCCTAATAGACATTCTGGATAAGTTGTACAAGGCCTTGGCAGACCCAGCTTaGGGCTCGGGATGTCTGCAC +
Preference number: 4 (lower is better)
Translates to: SGHNIRILIDILDKLYKALADPA*GSGCLH
Trigger: GTGCAGACATCCCGAGCCCCAAGCTGGGTCTGCCAA...GGCCTTGTACAACTTATCCAGAATGTCTATTAGGATTCTAATGTTATGTCCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471742.5
CDS-3UTR CCA 90 bp AGTGGACATAACATTAGAATCCTAATAGACATTCTGGATAAGTTGTACAAGGCCGTTCGGCTGCTCCACTaGGCCTCACAGGTTTGCAGG +
Preference number: 4 (lower is better)
Translates to: SGHNIRILIDILDKLYKAVRLLH*ASQVCR
Trigger: CCTGCAAACCTGTGAGGCCCAGTGGAGCAGCCGAAC...GGCCTTGTACAACTTATCCAGAATGTCTATTAGGATTCTAATGTTATGTCCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471742.5
CDS-3UTR TCA 90 bp ATCACATTTCCCATTAGACAGCACCTCAGCTCCTCTATACATACAGCAGTTCGCGGCTGTAATCTCGGCTaGTTAAACAGCCAAATCCAT +
Preference number: 4 (lower is better)
Translates to: ITFPIRQHLSSSIHTAVRGCNLG*LNSQIH
Trigger: ATGGATTTGGCTGTTTAATCAGCCGAGATTACAGCC...GCGAACTGCTGTATGTATAGAGGAGCTGAGGTGCTGTCTAATGGGAAATGTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS-3UTR TCA 90 bp TCTTTGAGTTACCAAATGCCTGAAGGTAGTACCACACCCCCTGGCCCCCATATTTTCAGCAACCTCATCTaGAATTTGACCTCCAAATGT +
Preference number: 4 (lower is better)
Translates to: SLSYQMPEGSTTPPGPHIFSNLI*NLTSKC
Trigger: ACATTTGGAGGTCAAATTTCAGATGAGGTTGCTGAA...AATATGGGGGCCAGGGGGTGTGGTACTACCTTCAGGCATTTGGTAACTCAAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR TCA 90 bp AACACCTTTCTGTACTGGGCACAGGCCGCTATTTTAACCATGCAGCTTCTGTGGTTCAGCAACCTCATCTaGAATTTGACCTCCAAATGT +
Preference number: 4 (lower is better)
Translates to: NTFLYWAQAAILTMQLLWFSNLI*NLTSKC
Trigger: ACATTTGGAGGTCAAATTTCAGATGAGGTTGCTGAA...CCACAGAAGCTGCATGGTTAAAATAGCGGCCTGTGCCCAGTACAGAAAGGTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR TCA 90 bp GTTGTGAGTTTTCAGATGTGCACAGTGGTAGCGACAGCAGACACCTCAAAGAATCCGGTGGGATCATATTaGACTGTCTTGCTACAGAAT +
Preference number: 4 (lower is better)
Translates to: VVSFQMCTVVATADTSKNPVGSY*TVLLQN
Trigger: ATTCTGTAGCAAGACAGTTCAATATGATCCCACCGG...ATTCTTTGAGGTGTCTGCTGTCGCTACCACTGTGCACATCTGAAAACTCACAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR TCA 90 bp GATTTTCTTGGTTGTGAGTTTTCAGATGTGCACAGTGGTAGCGACAGCAGACACGTTTCCGTATTTTCCTaGGATGATTCCACAGGCAAG +
Preference number: 4 (lower is better)
Translates to: DFLGCEFSDVHSGSDSRHVSVFS*DDSTGK
Trigger: CTTGCCTGTGGAATCATCTCAGGAAAATACGGAAAC...GTGTCTGCTGTCGCTACCACTGTGCACATCTGAAAACTCACAACCAAGAAAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR TCA 90 bp ATCACATTTCCCATTAGACAGCACCTCAGCTCCTCTATACATACAGCAGTTCGCCACCAAGGTTTTCAATaGGTTGTTCAGGAGTGGATG +
Preference number: 4 (lower is better)
Translates to: ITFPIRQHLSSSIHTAVRHQGFQ*VVQEWM
Trigger: CATCCACTCCTGAACAACTCATTGAAAACCTTGGTG...GCGAACTGCTGTATGTATAGAGGAGCTGAGGTGCTGTCTAATGGGAAATGTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302490.12
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR TCA 90 bp TACTGGGCACAGGCCGCTATTTTAACCATGCAGCTTCTGTGGTTCATGCATTGCTCATGCATTGCCTTATaGTCTATAGTCCTTCTTGCT +
Preference number: 4 (lower is better)
Translates to: YWAQAAILTMQLLWFMHCSCIAL*SIVLLA
Trigger: AGCAAGAAGGACTATAGATCATAAGGCAATGCATGA...GCAATGCATGAACCACAGAAGCTGCATGGTTAAAATAGCGGCCTGTGCCCAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR TCA 90 bp GATTTTCTTGGTTGTGAGTTTTCAGATGTGCACAGTGGTAGCGACAGCAGACACCTGTACAGCCTTCTTTaGGTTACCAAATGCCTGAAG +
Preference number: 4 (lower is better)
Translates to: DFLGCEFSDVHSGSDSRHLYSLL*VTKCLK
Trigger: CTTCAGGCATTTGGTAACTCAAAGAAGGCTGTACAG...GTGTCTGCTGTCGCTACCACTGTGCACATCTGAAAACTCACAACCAAGAAAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR TCA 90 bp GTTGTGAGTTTTCAGATGTGCACAGTGGTAGCGACAGCAGACACCTCAAAGAATCTGTACAGCCTTCTTTaGGTTACCAAATGCCTGAAG +
Preference number: 4 (lower is better)
Translates to: VVSFQMCTVVATADTSKNLYSLL*VTKCLK
Trigger: CTTCAGGCATTTGGTAACTCAAAGAAGGCTGTACAG...ATTCTTTGAGGTGTCTGCTGTCGCTACCACTGTGCACATCTGAAAACTCACAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR TCA 90 bp ATCACATTTCCCATTAGACAGCACCTCAGCTCCTCTATACATACAGCAGTTCGCCACTGTATCTTGCTGTaGATACCTTGGGTTATCTGG +
Preference number: 4 (lower is better)
Translates to: ITFPIRQHLSSSIHTAVRHCILL*IPWVIW
Trigger: CCAGATAACCCAAGGTATTCACAGCAAGATACAGTG...GCGAACTGCTGTATGTATAGAGGAGCTGAGGTGCTGTCTAATGGGAAATGTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471742.5
CDS-3UTR GCA 90 bp AGTGGACATAACATTAGAATCCTAATAGACATTCTGGATAAGTTGTACAAGGCCAGCATTCATGGTGACTaGACGCAGCCCTTCGCGGAG +
Preference number: 4 (lower is better)
Translates to: SGHNIRILIDILDKLYKASIHGD*TQPFAE
Trigger: CTCCGCGAAGGGCTGCGTGCAGTCACCATGAATGCT...GGCCTTGTACAACTTATCCAGAATGTCTATTAGGATTCTAATGTTATGTCCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS-3UTR GCA 90 bp ACACCTCAGATTTCGAGTGCAACAAGGGTAAGCCCCATTAATCCATGCAAAGAACGACTCTTCAAATTGTaGTCTGTGCAGGCTATGGAG +
Preference number: 4 (lower is better)
Translates to: TPQISSATRVSPINPCKERLFKL*SVQAME
Trigger: CTCCATAGCCTGCACAGAGCACAATTTGAAGAGTCG...TTCTTTGCATGGATTAATGGGGCTTACCCTTGTTGCACTCGAAATCTGAGGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS-3UTR GCA 90 bp CAGAATCACTTCAGCCTTTCCAGCAGCATAGACTTCGGCAGTATCAAAGAGGTTACTGTCCGGTCGATTTaGAAAGACCACATCCACATA +
Preference number: 4 (lower is better)
Translates to: QNHFSLSSSIDFGSIKEVTVRSI*KDHIHI
Trigger: TATGTGGATGTGGTCTTTGCAAATCGACCGGACAGT...AACCTCTTTGATACTGCCGAAGTCTATGCTGCTGGAAAGGCTGAAGTGATTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489036.5
CDS-3UTR GCA 90 bp AGTGGACATAACATTAGAATCCTAATAGACATTCTGGATAAGTTGTACAAGGCCCACTCCATCTCGAGGTaGCCCAGTACATCGCCATGC +
Preference number: 4 (lower is better)
Translates to: SGHNIRILIDILDKLYKAHSISR*PSTSPC
Trigger: GCATGGCGATGTACTGGGGCACCTCGAGATGGAGTG...GGCCTTGTACAACTTATCCAGAATGTCTATTAGGATTCTAATGTTATGTCCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302490.12
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR GCA 90 bp AGTTGTACAAGGCCATTCTTGGGGCCAAGCAACAGTAAATATTTGAAAGGTAATCTAGCTGAGGTAGTGTaGATCCCAGACGCTCCGCAA +
Preference number: 4 (lower is better)
Translates to: SCTRPFLGPSNSKYLKGNLAEVV*IPDAPQ
Trigger: TTGCGGAGCGTCTGGGATGCACACTACCTCAGCTAG...ATTACCTTTCAAATATTTACTGTTGCTTGGCCCCAAGAATGGCCTTGTACAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302490.12
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR GCA 90 bp CTGGCCCCCATATTCTTCCCATTGCATAAGCATGAGGTGTATACAGCAATGCAAATCTATAGTCCTTCTTaGTGTAGGGCTTGTTGCGCA +
Preference number: 4 (lower is better)
Translates to: LAPIFFPLHKHEVYTAMQIYSPS*CRACCA
Trigger: TGCGCAACAAGCCCTACAGCAAGAAGGACTATAGAT...TTGCATTGCTGTATACACCTCATGCTTATGCAATGGGAAGAATATGGGGGCCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR GCA 90 bp GTTGTGAGTTTTCAGATGTGCACAGTGGTAGCGACAGCAGACACCTCAAAGAATATCTATAGTCCTTCTTaGTGTAGGGCTTGTTGCGCA +
Preference number: 4 (lower is better)
Translates to: VVSFQMCTVVATADTSKNIYSPS*CRACCA
Trigger: TGCGCAACAAGCCCTACAGCAAGAAGGACTATAGAT...ATTCTTTGAGGTGTCTGCTGTCGCTACCACTGTGCACATCTGAAAACTCACAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR GCA 90 bp GATTTTCTTGGTTGTGAGTTTTCAGATGTGCACAGTGGTAGCGACAGCAGACACATCTATAGTCCTTCTTaGTGTAGGGCTTGTTGCGCA +
Preference number: 4 (lower is better)
Translates to: DFLGCEFSDVHSGSDSRHIYSPS*CRACCA
Trigger: TGCGCAACAAGCCCTACAGCAAGAAGGACTATAGAT...GTGTCTGCTGTCGCTACCACTGTGCACATCTGAAAACTCACAACCAAGAAAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR GCA 90 bp AACACCTTTCTGTACTGGGCACAGGCCGCTATTTTAACCATGCAGCTTCTGTGGCTGTGGTTCATGCATTaGCTTATGATCTATAGTCCT +
Preference number: 4 (lower is better)
Translates to: NTFLYWAQAAILTMQLLWLWFMH*LMIYSP
Trigger: AGGACTATAGATCATAAGGCAATGCATGAACCACAG...CCACAGAAGCTGCATGGTTAAAATAGCGGCCTGTGCCCAGTACAGAAAGGTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR GCA 90 bp ACACCTCAGATTTCGAGTGCAACAAGGGTAAGCCCCATTAATCCATGCAAAGAAACCTCAGATTTCGAGTaGAACAAGGGTAAGCCCCAT +
Preference number: 4 (lower is better)
Translates to: TPQISSATRVSPINPCKETSDFE*NKGKPH
Trigger: ATGGGGCTTACCCTTGTTGCACTCGAAATCTGAGGT...TTCTTTGCATGGATTAATGGGGCTTACCCTTGTTGCACTCGAAATCTGAGGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302490.12
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR GCA 90 bp TACCACACCCCCTGGCCCCCATATTCTTCCCATTGCATAAGCATGAGGTGTATAGGAAGCAAAGCTAATTaGACGGTGCTTAACTTTAAG +
Preference number: 4 (lower is better)
Translates to: YHTPWPPYSSHCISMRCIGSKAN*TVLNFK
Trigger: CTTAAAGTTAAGCACCGTGCAATTAGCTTTGCTTCC...TATACACCTCATGCTTATGCAATGGGAAGAATATGGGGGCCAGGGGGTGTGGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000471742.5
CDS-3UTR CCA 90 bp ACACCTCAGATTTCGAGTGCAACAAGGGTAAGCCCCATTAATCCATGCAAAGAATGCCTTTGTGTGCGATaGGAAGGCAAAGATCACTTG +
Preference number: 4 (lower is better)
Translates to: TPQISSATRVSPINPCKECLCVR*EGKDHL
Trigger: CAAGTGATCTTTGCCTTCCCATCGCACACAAAGGCA...TTCTTTGCATGGATTAATGGGGCTTACCCTTGTTGCACTCGAAATCTGAGGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS-3UTR CCA 90 bp AACACCTTTCTGTACTGGGCACAGGCCGCTATTTTAACCATGCAGCTTCTGTGGTTATCACATGTGTCATaGCTCGGACAATTTCTTCCA +
Preference number: 4 (lower is better)
Translates to: NTFLYWAQAAILTMQLLWLSHVS*LGQFLP
Trigger: TGGAAGAAATTGTCCGAGCCATGACACATGTGATAA...CCACAGAAGCTGCATGGTTAAAATAGCGGCCTGTGCCCAGTACAGAAAGGTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302490.12
ENST00000471742.5
ENST00000490337.6
CDS-3UTR CCA 90 bp CTGGCCCCCATATTCTTCCCATTGCATAAGCATGAGGTGTATACAGCAATGCAAACCATGCAGCTTCTGTaGTTCATGCATTGCCTTATG +
Preference number: 4 (lower is better)
Translates to: LAPIFFPLHKHEVYTAMQTMQLL*FMHCLM
Trigger: CATAAGGCAATGCATGAACCACAGAAGCTGCATGGT...TTGCATTGCTGTATACACCTCATGCTTATGCAATGGGAAGAATATGGGGGCCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR CCA 90 bp GTTGTGAGTTTTCAGATGTGCACAGTGGTAGCGACAGCAGACACCTCAAAGAATACCATGCAGCTTCTGTaGTTCATGCATTGCCTTATG +
Preference number: 4 (lower is better)
Translates to: VVSFQMCTVVATADTSKNTMQLL*FMHCLM
Trigger: CATAAGGCAATGCATGAACCACAGAAGCTGCATGGT...ATTCTTTGAGGTGTCTGCTGTCGCTACCACTGTGCACATCTGAAAACTCACAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR CCA 90 bp GATTTTCTTGGTTGTGAGTTTTCAGATGTGCACAGTGGTAGCGACAGCAGACACACCATGCAGCTTCTGTaGTTCATGCATTGCCTTATG +
Preference number: 4 (lower is better)
Translates to: DFLGCEFSDVHSGSDSRHTMQLL*FMHCLM
Trigger: CATAAGGCAATGCATGAACCACAGAAGCTGCATGGT...GTGTCTGCTGTCGCTACCACTGTGCACATCTGAAAACTCACAACCAAGAAAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR CCA 90 bp ATCACATTTCCCATTAGACAGCACCTCAGCTCCTCTATACATACAGCAGTTCGCAACACCTTTCTGTACTaGGCACAGGCCGCTATTTTA +
Preference number: 4 (lower is better)
Translates to: ITFPIRQHLSSSIHTAVRNTFLY*AQAAIL
Trigger: TAAAATAGCGGCCTGTGCCCAGTACAGAAAGGTGTT...GCGAACTGCTGTATGTATAGAGGAGCTGAGGTGCTGTCTAATGGGAAATGTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302490.12
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR CCA 90 bp CCTTCTTTGAGTTACCAAATGCCTGAAGGTAGTACCACACCCCCTGGCCCCCATAGTGATTCAAAAGACTaGTTAGTAACACCTTTCTGT +
Preference number: 4 (lower is better)
Translates to: PSLSYQMPEGSTTPPGPHSDSKD*LVTPFC
Trigger: ACAGAAAGGTGTTACTAACCAGTCTTTTGAATCACT...ATGGGGGCCAGGGGGTGTGGTACTACCTTCAGGCATTTGGTAACTCAAAGAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR CCA 90 bp GTTGTGAGTTTTCAGATGTGCACAGTGGTAGCGACAGCAGACACCTCAAAGAATGTACAAGGCCATTCTTaGGGCCAAGCAACAGTAAAT +
Preference number: 4 (lower is better)
Translates to: VVSFQMCTVVATADTSKNVQGHS*GQATVN
Trigger: ATTTACTGTTGCTTGGCCCCAAGAATGGCCTTGTAC...ATTCTTTGAGGTGTCTGCTGTCGCTACCACTGTGCACATCTGAAAACTCACAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302490.12
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR CCA 90 bp CTGGCCCCCATATTCTTCCCATTGCATAAGCATGAGGTGTATACAGCAATGCAAGTACAAGGCCATTCTTaGGGCCAAGCAACAGTAAAT +
Preference number: 4 (lower is better)
Translates to: LAPIFFPLHKHEVYTAMQVQGHS*GQATVN
Trigger: ATTTACTGTTGCTTGGCCCCAAGAATGGCCTTGTAC...TTGCATTGCTGTATACACCTCATGCTTATGCAATGGGAAGAATATGGGGGCCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302490.12
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR CCA 90 bp TACCACACCCCCTGGCCCCCATATTCTTCCCATTGCATAAGCATGAGGTGTATACATACAGCAGTTCGCTaGATTGAATACACAATGAAC +
Preference number: 4 (lower is better)
Translates to: YHTPWPPYSSHCISMRCIHTAVR*IEYTMN
Trigger: GTTCATTGTGTATTCAATCCAGCGAACTGCTGTATG...TATACACCTCATGCTTATGCAATGGGAAGAATATGGGGGCCAGGGGGTGTGGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000302490.12
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR CCA 90 bp AACACCTTTCTGTACTGGGCACAGGCCGCTATTTTAACCATGCAGCTTCTGTGGCATACAGCAGTTCGCTaGATTGAATACACAATGAAC +
Preference number: 4 (lower is better)
Translates to: NTFLYWAQAAILTMQLLWHTAVR*IEYTMN
Trigger: GTTCATTGTGTATTCAATCCAGCGAACTGCTGTATG...CCACAGAAGCTGCATGGTTAAAATAGCGGCCTGTGCCCAGTACAGAAAGGTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302490.12
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR CCA 90 bp CTGAAGGTAGTACCACACCCCCTGGCCCCCATATTCTTCCCATTGCATAAGCATTTATCACATGTGTCATaGCTCGGACAATTTCTTCAA +
Preference number: 4 (lower is better)
Translates to: LKVVPHPLAPIFFPLHKHLSHVS*LGQFLQ
Trigger: TTGAAGAAATTGTCCGAGCCATGACACATGTGATAA...ATGCTTATGCAATGGGAAGAATATGGGGGCCAGGGGGTGTGGTACTACCTTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000389636.9
ENST00000618897.4
CDS-3UTR TCA 90 bp TCTTTGAGTTACCAAATGCCTGAAGGTAGTACCACACCCCCTGGCCCCCATATTAGAAACTCTGAGTCCTaGTTTTCCAAGATTCCTATA +
Preference number: 4 (lower is better)
Translates to: SLSYQMPEGSTTPPGPHIRNSES*FSKIPI
Trigger: TATAGGAATCTTGGAAAATCAGGACTCAGAGTTTCT...AATATGGGGGCCAGGGGGTGTGGTACTACCTTCAGGCATTTGGTAACTCAAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS-3UTR TCA 90 bp TACTGGGCACAGGCCGCTATTTTAACCATGCAGCTTCTGTGGTTCATGCATTGCAGAAACTCTGAGTCCTaGTTTTCCAAGATTCCTATA +
Preference number: 4 (lower is better)
Translates to: YWAQAAILTMQLLWFMHCRNSES*FSKIPI
Trigger: TATAGGAATCTTGGAAAATCAGGACTCAGAGTTTCT...GCAATGCATGAACCACAGAAGCTGCATGGTTAAAATAGCGGCCTGTGCCCAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS-3UTR TCA 90 bp TTCAGCCTTTCCAGCAGCATAGACTTCGGCAGTATCAAAGAGGTTAACACCACTACCTCATCTGAAATTTaGCCTCCAAATGTCACCCAT +
Preference number: 4 (lower is better)
Translates to: FSLSSSIDFGSIKEVNTTTSSEI*PPNVTH
Trigger: ATGGGTGACATTTGGAGGTCAAATTTCAGATGAGGT...AGTGGTGTTAACCTCTTTGATACTGCCGAAGTCTATGCTGCTGGAAAGGCTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489036.5
CDS-3UTR TCA 90 bp CTGGCCCCCATATTCTTCCCATTGCATAAGCATGAGGTGTATACAGCAATGCAAACCTCATCTGAAATTTaGCCTCCAAATGTCACCCAT +
Preference number: 4 (lower is better)
Translates to: LAPIFFPLHKHEVYTAMQTSSEI*PPNVTH
Trigger: ATGGGTGACATTTGGAGGTCAAATTTCAGATGAGGT...TTGCATTGCTGTATACACCTCATGCTTATGCAATGGGAAGAATATGGGGGCCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR TCA 90 bp GATTTTCTTGGTTGTGAGTTTTCAGATGTGCACAGTGGTAGCGACAGCAGACACACCTCATCTGAAATTTaGCCTCCAAATGTCACCCAT +
Preference number: 4 (lower is better)
Translates to: DFLGCEFSDVHSGSDSRHTSSEI*PPNVTH
Trigger: ATGGGTGACATTTGGAGGTCAAATTTCAGATGAGGT...GTGTCTGCTGTCGCTACCACTGTGCACATCTGAAAACTCACAACCAAGAAAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR TCA 90 bp TACTGGGCACAGGCCGCTATTTTAACCATGCAGCTTCTGTGGTTCATGCATTGCAATAATATGCTTTCTTaGCAGCCCTCTTTCTGTTTC +
Preference number: 4 (lower is better)
Translates to: YWAQAAILTMQLLWFMHCNNMLS*QPSFCF
Trigger: GAAACAGAAAGAGGGCTGTCAAGAAAGCATATTATT...GCAATGCATGAACCACAGAAGCTGCATGGTTAAAATAGCGGCCTGTGCCCAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR TCA 90 bp TCTTTGAGTTACCAAATGCCTGAAGGTAGTACCACACCCCCTGGCCCCCATATTAATAATATGCTTTCTTaGCAGCCCTCTTTCTGTTTC +
Preference number: 4 (lower is better)
Translates to: SLSYQMPEGSTTPPGPHINNMLS*QPSFCF
Trigger: GAAACAGAAAGAGGGCTGTCAAGAAAGCATATTATT...AATATGGGGGCCAGGGGGTGTGGTACTACCTTCAGGCATTTGGTAACTCAAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR TCA 90 bp CTGGCCCCCATATTCTTCCCATTGCATAAGCATGAGGTGTATACAGCAATGCAACTCATTTACCACATGTaGTGTCATCTTTGGGAGAAC +
Preference number: 4 (lower is better)
Translates to: LAPIFFPLHKHEVYTAMQLIYHM*CHLWEN
Trigger: GTTCTCCCAAAGATGACATCACATGTGGTAAATGAG...TTGCATTGCTGTATACACCTCATGCTTATGCAATGGGAAGAATATGGGGGCCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR TCA 90 bp GATTTTCTTGGTTGTGAGTTTTCAGATGTGCACAGTGGTAGCGACAGCAGACACGGATTTTCTTGGTTGTaGGTTTTCAGATGTGCACAG +
Preference number: 4 (lower is better)
Translates to: DFLGCEFSDVHSGSDSRHGFSWL*VFRCAQ
Trigger: CTGTGCACATCTGAAAACTCACAACCAAGAAAATCC...GTGTCTGCTGTCGCTACCACTGTGCACATCTGAAAACTCACAACCAAGAAAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR TCA 90 bp ACACCTCAGATTTCGAGTGCAACAAGGGTAAGCCCCATTAATCCATGCAAAGAACTGTACAGCCTTCTTTaGGTTACCAAATGCCTGAAG +
Preference number: 4 (lower is better)
Translates to: TPQISSATRVSPINPCKELYSLL*VTKCLK
Trigger: CTTCAGGCATTTGGTAACTCAAAGAAGGCTGTACAG...TTCTTTGCATGGATTAATGGGGCTTACCCTTGTTGCACTCGAAATCTGAGGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302490.12
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR TCA 90 bp TACCACACCCCCTGGCCCCCATATTCTTCCCATTGCATAAGCATGAGGTGTATATCCAAGCAAGACTTTTaGGTGAAGATACTGCTTTTT +
Preference number: 4 (lower is better)
Translates to: YHTPWPPYSSHCISMRCISKQDF*VKILLF
Trigger: AAAAAGCAGTATCTTCACTCAAAAGTCTTGCTTGGA...TATACACCTCATGCTTATGCAATGGGAAGAATATGGGGGCCAGGGGGTGTGGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR TCA 90 bp CTGGCCCCCATATTCTTCCCATTGCATAAGCATGAGGTGTATACAGCAATGCAAAGCAGTTCGCTGGATTaGATACACAATGAACAACTG +
Preference number: 4 (lower is better)
Translates to: LAPIFFPLHKHEVYTAMQSSSLD*IHNEQL
Trigger: CAGTTGTTCATTGTGTATTCAATCCAGCGAACTGCT...TTGCATTGCTGTATACACCTCATGCTTATGCAATGGGAAGAATATGGGGGCCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302490.12
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR TCA 90 bp AACACCTTTCTGTACTGGGCACAGGCCGCTATTTTAACCATGCAGCTTCTGTGGTTAAAAGTGAATTTGTaGAGCCTTAACCTTAGTGCG +
Preference number: 4 (lower is better)
Translates to: NTFLYWAQAAILTMQLLWLKVNL*SLNLSA
Trigger: CGCACTAAGGTTAAGGCTTCACAAATTCACTTTTAA...CCACAGAAGCTGCATGGTTAAAATAGCGGCCTGTGCCCAGTACAGAAAGGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618897.4
CDS-3UTR GCA 90 bp AGTGGACATAACATTAGAATCCTAATAGACATTCTGGATAAGTTGTACAAGGCCCAGGCTATGGAGACTTaGATTGCTTCCCCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: SGHNIRILIDILDKLYKAQAMET*IASPGS
Trigger: GCTGCCTGGGGAAGCAATGCAAGTCTCCATAGCCTG...GGCCTTGTACAACTTATCCAGAATGTCTATTAGGATTCTAATGTTATGTCCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS-3UTR GCA 90 bp ACACCTCAGATTTCGAGTGCAACAAGGGTAAGCCCCATTAATCCATGCAAAGAATCAAATTGTGCTCTGTaGAGGCTATGGAGACTTGCA +
Preference number: 4 (lower is better)
Translates to: TPQISSATRVSPINPCKESNCAL*RLWRLA
Trigger: TGCAAGTCTCCATAGCCTGCACAGAGCACAATTTGA...TTCTTTGCATGGATTAATGGGGCTTACCCTTGTTGCACTCGAAATCTGAGGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS-3UTR GCA 90 bp ACACCTCAGATTTCGAGTGCAACAAGGGTAAGCCCCATTAATCCATGCAAAGAAACTGTCCGGTCGATTTaGAAAGACCACATCCACATA +
Preference number: 4 (lower is better)
Translates to: TPQISSATRVSPINPCKETVRSI*KDHIHI
Trigger: TATGTGGATGTGGTCTTTGCAAATCGACCGGACAGT...TTCTTTGCATGGATTAATGGGGCTTACCCTTGTTGCACTCGAAATCTGAGGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302490.12
ENST00000471742.5
ENST00000490337.6
CDS-3UTR GCA 90 bp TACCACACCCCCTGGCCCCCATATTCTTCCCATTGCATAAGCATGAGGTGTATACATATTGAACTGTCTTaGTACAGAATAGGCTTCCAT +
Preference number: 4 (lower is better)
Translates to: YHTPWPPYSSHCISMRCIHIELS*YRIGFH
Trigger: ATGGAAGCCTATTCTGTAGCAAGACAGTTCAATATG...TATACACCTCATGCTTATGCAATGGGAAGAATATGGGGGCCAGGGGGTGTGGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR GCA 90 bp GTTGTGAGTTTTCAGATGTGCACAGTGGTAGCGACAGCAGACACCTCAAAGAATTGCTGTAGGGCTTGTTaGGCAGTATGTTATCAATCT +
Preference number: 4 (lower is better)
Translates to: VVSFQMCTVVATADTSKNCCRAC*AVCYQS
Trigger: AGATTGATAACATACTGCGCAACAAGCCCTACAGCA...ATTCTTTGAGGTGTCTGCTGTCGCTACCACTGTGCACATCTGAAAACTCACAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR GCA 90 bp CTGGCCCCCATATTCTTCCCATTGCATAAGCATGAGGTGTATACAGCAATGCAAAGATTTGTCTTTCCCTaGTACAGAAAACCCAGACTG +
Preference number: 4 (lower is better)
Translates to: LAPIFFPLHKHEVYTAMQRFVFP*YRKPRL
Trigger: CAGTCTGGGTTTTCTGTAGCAGGGAAAGACAAATCT...TTGCATTGCTGTATACACCTCATGCTTATGCAATGGGAAGAATATGGGGGCCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389636.9
ENST00000490337.6
CDS-3UTR CCA 90 bp GTTGTGAGTTTTCAGATGTGCACAGTGGTAGCGACAGCAGACACCTCAAAGAATTACATCGCCATGCCTTaGTTTATCACATGTGTCATG +
Preference number: 4 (lower is better)
Translates to: VVSFQMCTVVATADTSKNYIAMP*FITCVM
Trigger: CATGACACATGTGATAAACCAAGGCATGGCGATGTA...ATTCTTTGAGGTGTCTGCTGTCGCTACCACTGTGCACATCTGAAAACTCACAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR CCA 90 bp AACACCTTTCTGTACTGGGCACAGGCCGCTATTTTAACCATGCAGCTTCTGTGGGAACATTTGCCTTCCTaGGTATTTTACAGGTTTACT +
Preference number: 4 (lower is better)
Translates to: NTFLYWAQAAILTMQLLWEHLPS*VFYRFT
Trigger: AGTAAACCTGTAAAATACCCAGGAAGGCAAATGTTC...CCACAGAAGCTGCATGGTTAAAATAGCGGCCTGTGCCCAGTACAGAAAGGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302490.12
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR CCA 90 bp AACACCTTTCTGTACTGGGCACAGGCCGCTATTTTAACCATGCAGCTTCTGTGGTTATCACATGTGTCATaGCTCGGACAATTTCTTCAA +
Preference number: 4 (lower is better)
Translates to: NTFLYWAQAAILTMQLLWLSHVS*LGQFLQ
Trigger: TTGAAGAAATTGTCCGAGCCATGACACATGTGATAA...CCACAGAAGCTGCATGGTTAAAATAGCGGCCTGTGCCCAGTACAGAAAGGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389636.9
ENST00000618897.4
CDS-3UTR CCA 90 bp GATTTTCTTGGTTGTGAGTTTTCAGATGTGCACAGTGGTAGCGACAGCAGACACACTGTCTCCTTAACTTaGTGTTCTCCTCTGAGATCT +
Preference number: 4 (lower is better)
Translates to: DFLGCEFSDVHSGSDSRHTVSLT*CSPLRS
Trigger: AGATCTCAGAGGAGAACACCAAGTTAAGGAGACAGT...GTGTCTGCTGTCGCTACCACTGTGCACATCTGAAAACTCACAACCAAGAAAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389636.9
ENST00000490337.6
CDS-3UTR TCA 90 bp GAGCCCTTCAATCCTTCAATAATATGCTTTCTTGACAGCCCTCTTTCTGTTTCATTGCGGTGGACTCTTTaGGAGAAATGTGATGCTGAG +
Preference number: 4 (lower is better)
Translates to: EPFNPSIICFLDSPLSVSLRWTL*EKCDAE
Trigger: CTCAGCATCACATTTCTCTCAAAGAGTCCACCGCAA...TGAAACAGAAAGAGGGCTGTCAAGAAAGCATATTATTGAAGGATTGAAGGGCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489036.5
CDS-3UTR TCA 90 bp ATCAAAGAGGTTAACACCACTTTCATAGGCGATGGTCATCAGCCGTTCAGCAACTTCAGCAACCTCATCTaGAATTTGACCTCCAAATGT +
Preference number: 4 (lower is better)
Translates to: IKEVNTTFIGDGHQPFSNFSNLI*NLTSKC
Trigger: ACATTTGGAGGTCAAATTTCAGATGAGGTTGCTGAA...GTTGCTGAACGGCTGATGACCATCGCCTATGAAAGTGGTGTTAACCTCTTTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489036.5
CDS-3UTR TCA 90 bp CTGGCCCCCATATTCTTCCCATTGCATAAGCATGAGGTGTATACAGCAATGCAATTCAGCAACCTCATCTaGAATTTGACCTCCAAATGT +
Preference number: 4 (lower is better)
Translates to: LAPIFFPLHKHEVYTAMQFSNLI*NLTSKC
Trigger: ACATTTGGAGGTCAAATTTCAGATGAGGTTGCTGAA...TTGCATTGCTGTATACACCTCATGCTTATGCAATGGGAAGAATATGGGGGCCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR TCA 90 bp TCGGACAATTTCTTCCATGGGAGTGTTACTGTCCGGTCGATTTGCAAAGACCACAATAATATGCTTTCTTaGCAGCCCTCTTTCTGTTTC +
Preference number: 4 (lower is better)
Translates to: SDNFFHGSVTVRSICKDHNNMLS*QPSFCF
Trigger: GAAACAGAAAGAGGGCTGTCAAGAAAGCATATTATT...GTGGTCTTTGCAAATCGACCGGACAGTAACACTCCCATGGAAGAAATTGTCCGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489036.5
CDS-3UTR TCA 90 bp AGTTGTACAAGGCCATTCTTGGGGCCAAGCAACAGTAAATATTTGAAAGGTAATTTGTTCAGGAGTGGATaGTCCCAGGAGCACAGAACT +
Preference number: 4 (lower is better)
Translates to: SCTRPFLGPSNSKYLKGNLFRSG*SQEHRT
Trigger: AGTTCTGTGCTCCTGGGATCATCCACTCCTGAACAA...ATTACCTTTCAAATATTTACTGTTGCTTGGCCCCAAGAATGGCCTTGTACAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302490.12
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR TCA 90 bp GTTGTGAGTTTTCAGATGTGCACAGTGGTAGCGACAGCAGACACCTCAAAGAATTCATGCATTGCCTTATaGTCTATAGTCCTTCTTGCT +
Preference number: 4 (lower is better)
Translates to: VVSFQMCTVVATADTSKNSCIAL*SIVLLA
Trigger: AGCAAGAAGGACTATAGATCATAAGGCAATGCATGA...ATTCTTTGAGGTGTCTGCTGTCGCTACCACTGTGCACATCTGAAAACTCACAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR TCA 90 bp CTGGCCCCCATATTCTTCCCATTGCATAAGCATGAGGTGTATACAGCAATGCAATCATGCATTGCCTTATaGTCTATAGTCCTTCTTGCT +
Preference number: 4 (lower is better)
Translates to: LAPIFFPLHKHEVYTAMQSCIAL*SIVLLA
Trigger: AGCAAGAAGGACTATAGATCATAAGGCAATGCATGA...TTGCATTGCTGTATACACCTCATGCTTATGCAATGGGAAGAATATGGGGGCCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR TCA 90 bp ACACCTCAGATTTCGAGTGCAACAAGGGTAAGCCCCATTAATCCATGCAAAGAACAATGCAAGAATAGGTaGCTCCAGTCCAAGATAAGA +
Preference number: 4 (lower is better)
Translates to: TPQISSATRVSPINPCKEQCKNR*LQSKIR
Trigger: TCTTATCTTGGACTGGAGTCACCTATTCTTGCATTG...TTCTTTGCATGGATTAATGGGGCTTACCCTTGTTGCACTCGAAATCTGAGGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302490.12
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR TCA 90 bp ACACCTCAGATTTCGAGTGCAACAAGGGTAAGCCCCATTAATCCATGCAAAGAAAGCAGTTCGCTGGATTaGATACACAATGAACAACTG +
Preference number: 4 (lower is better)
Translates to: TPQISSATRVSPINPCKESSSLD*IHNEQL
Trigger: CAGTTGTTCATTGTGTATTCAATCCAGCGAACTGCT...TTCTTTGCATGGATTAATGGGGCTTACCCTTGTTGCACTCGAAATCTGAGGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302490.12
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR TCA 90 bp ATCACATTTCCCATTAGACAGCACCTCAGCTCCTCTATACATACAGCAGTTCGCAGAAACTCTGAGTCCTaGTTTTCCAAGATTCCTGTA +
Preference number: 4 (lower is better)
Translates to: ITFPIRQHLSSSIHTAVRRNSES*FSKIPV
Trigger: TACAGGAATCTTGGAAAATCAGGACTCAGAGTTTCT...GCGAACTGCTGTATGTATAGAGGAGCTGAGGTGCTGTCTAATGGGAAATGTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471742.5
CDS-3UTR GCA 90 bp ACACCTCAGATTTCGAGTGCAACAAGGGTAAGCCCCATTAATCCATGCAAAGAATGCTGTAGGGCTTGTTaGGCAGTATGTTATCAATCT +
Preference number: 4 (lower is better)
Translates to: TPQISSATRVSPINPCKECCRAC*AVCYQS
Trigger: AGATTGATAACATACTGCGCAACAAGCCCTACAGCA...TTCTTTGCATGGATTAATGGGGCTTACCCTTGTTGCACTCGAAATCTGAGGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302490.12
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR GCA 90 bp GATTTTCTTGGTTGTGAGTTTTCAGATGTGCACAGTGGTAGCGACAGCAGACACCTGTGGTTCATGCATTaGCTTATGATCTATAGTCCT +
Preference number: 4 (lower is better)
Translates to: DFLGCEFSDVHSGSDSRHLWFMH*LMIYSP
Trigger: AGGACTATAGATCATAAGGCAATGCATGAACCACAG...GTGTCTGCTGTCGCTACCACTGTGCACATCTGAAAACTCACAACCAAGAAAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR GCA 90 bp GTTGTGAGTTTTCAGATGTGCACAGTGGTAGCGACAGCAGACACCTCAAAGAATAACTTGCAGAAGTTGTaGCTACAAGCAGTTGAAAGT +
Preference number: 4 (lower is better)
Translates to: VVSFQMCTVVATADTSKNNLQKL*LQAVES
Trigger: ACTTTCAACTGCTTGTAGGCACAACTTCTGCAAGTT...ATTCTTTGAGGTGTCTGCTGTCGCTACCACTGTGCACATCTGAAAACTCACAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302490.12
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR CCA 90 bp AGTGGACATAACATTAGAATCCTAATAGACATTCTGGATAAGTTGTACAAGGCCGCTCTGTGCAGGCTATaGAGACTTGCATTGCTTCCC +
Preference number: 4 (lower is better)
Translates to: SGHNIRILIDILDKLYKAALCRL*RLALLP
Trigger: GGGAAGCAATGCAAGTCTCCATAGCCTGCACAGAGC...GGCCTTGTACAACTTATCCAGAATGTCTATTAGGATTCTAATGTTATGTCCACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS-3UTR CCA 90 bp CTGGCCCCCATATTCTTCCCATTGCATAAGCATGAGGTGTATACAGCAATGCAATTATCACATGTGTCATaGCTCGGACAATTTCTTCCA +
Preference number: 4 (lower is better)
Translates to: LAPIFFPLHKHEVYTAMQLSHVS*LGQFLP
Trigger: TGGAAGAAATTGTCCGAGCCATGACACATGTGATAA...TTGCATTGCTGTATACACCTCATGCTTATGCAATGGGAAGAATATGGGGGCCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302490.12
ENST00000471742.5
ENST00000490337.6
CDS-3UTR CCA 90 bp AGTGGACATAACATTAGAATCCTAATAGACATTCTGGATAAGTTGTACAAGGCCACTTCAGTGAAGCCCTaGAACTTTCAGGCACCCCGT +
Preference number: 4 (lower is better)
Translates to: SGHNIRILIDILDKLYKATSVKP*NFQAPR
Trigger: ACGGGGTGCCTGAAAGTTCCAGGGCTTCACTGAAGT...GGCCTTGTACAACTTATCCAGAATGTCTATTAGGATTCTAATGTTATGTCCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302490.12
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR CCA 90 bp TCTTTGAGTTACCAAATGCCTGAAGGTAGTACCACACCCCCTGGCCCCCATATTTTTTCACAAAGCCAGTaGTTGACTTTCATGTTAACA +
Preference number: 4 (lower is better)
Translates to: SLSYQMPEGSTTPPGPHIFSQSQ*LTFMLT
Trigger: TGTTAACATGAAAGTCAACCACTGGCTTTGTGAAAA...AATATGGGGGCCAGGGGGTGTGGTACTACCTTCAGGCATTTGGTAACTCAAAGA
43% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000302490.12
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR TCA 90 bp CTGGCCCCCATATTCTTCCCATTGCATAAGCATGAGGTGTATACAGCAATGCAAAATAATATGCTTTCTTaGCAGCCCTCTTTCTGTTTC +
Preference number: 4 (lower is better)
Translates to: LAPIFFPLHKHEVYTAMQNNMLS*QPSFCF
Trigger: GAAACAGAAAGAGGGCTGTCAAGAAAGCATATTATT...TTGCATTGCTGTATACACCTCATGCTTATGCAATGGGAAGAATATGGGGGCCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR TCA 90 bp ATCACATTTCCCATTAGACAGCACCTCAGCTCCTCTATACATACAGCAGTTCGCAATAATATGCTTTCTTaGCAGCCCTCTTTCTGTTTC +
Preference number: 4 (lower is better)
Translates to: ITFPIRQHLSSSIHTAVRNNMLS*QPSFCF
Trigger: GAAACAGAAAGAGGGCTGTCAAGAAAGCATATTATT...GCGAACTGCTGTATGTATAGAGGAGCTGAGGTGCTGTCTAATGGGAAATGTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302490.12
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR GCA 90 bp CTGGCCCCCATATTCTTCCCATTGCATAAGCATGAGGTGTATACAGCAATGCAACATATTGAACTGTCTTaGTACAGAATAGGCTTCCAT +
Preference number: 4 (lower is better)
Translates to: LAPIFFPLHKHEVYTAMQHIELS*YRIGFH
Trigger: ATGGAAGCCTATTCTGTAGCAAGACAGTTCAATATG...TTGCATTGCTGTATACACCTCATGCTTATGCAATGGGAAGAATATGGGGGCCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR GCA 90 bp AGTTGTACAAGGCCATTCTTGGGGCCAAGCAACAGTAAATATTTGAAAGGTAATACCTCAGATTTCGAGTaGAACAAGGGTAAGCCCCAT +
Preference number: 4 (lower is better)
Translates to: SCTRPFLGPSNSKYLKGNTSDFE*NKGKPH
Trigger: ATGGGGCTTACCCTTGTTGCACTCGAAATCTGAGGT...ATTACCTTTCAAATATTTACTGTTGCTTGGCCCCAAGAATGGCCTTGTACAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302490.12
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR GCA 90 bp ACACCTCAGATTTCGAGTGCAACAAGGGTAAGCCCCATTAATCCATGCAAAGAACTGTTGAGTATTCAGTaGAGCTTAGCTGCCAATATA +
Preference number: 4 (lower is better)
Translates to: TPQISSATRVSPINPCKELLSIQ*SLAANI
Trigger: TATATTGGCAGCTAAGCTGCACTGAATACTCAACAG...TTCTTTGCATGGATTAATGGGGCTTACCCTTGTTGCACTCGAAATCTGAGGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618897.4
CDS-3UTR CCA 90 bp AGTTGTACAAGGCCATTCTTGGGGCCAAGCAACAGTAAATATTTGAAAGGTAATCACTTTCATAGGCGATaGTCATCAGCCGTTCAGCAA +
Preference number: 4 (lower is better)
Translates to: SCTRPFLGPSNSKYLKGNHFHRR*SSAVQQ
Trigger: TTGCTGAACGGCTGATGACCATCGCCTATGAAAGTG...ATTACCTTTCAAATATTTACTGTTGCTTGGCCCCAAGAATGGCCTTGTACAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302490.12
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR CCA 90 bp GTTGTGAGTTTTCAGATGTGCACAGTGGTAGCGACAGCAGACACCTCAAAGAATGAACATTTGCCTTCCTaGGTATTTTACAGGTTTACT +
Preference number: 4 (lower is better)
Translates to: VVSFQMCTVVATADTSKNEHLPS*VFYRFT
Trigger: AGTAAACCTGTAAAATACCCAGGAAGGCAAATGTTC...ATTCTTTGAGGTGTCTGCTGTCGCTACCACTGTGCACATCTGAAAACTCACAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302490.12
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR TCA 90 bp ACACCTCAGATTTCGAGTGCAACAAGGGTAAGCCCCATTAATCCATGCAAAGAATGTTCTAAAACCCAGTaGGAAATGGTATCTTCAGTA +
Preference number: 4 (lower is better)
Translates to: TPQISSATRVSPINPCKECSKTQ*EMVSSV
Trigger: TACTGAAGATACCATTTCTCACTGGGTTTTAGAACA...TTCTTTGCATGGATTAATGGGGCTTACCCTTGTTGCACTCGAAATCTGAGGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618897.4
CDS-3UTR GCA 90 bp AGTGGACATAACATTAGAATCCTAATAGACATTCTGGATAAGTTGTACAAGGCCGACTCAGACCAAATCTaGTGCAGCACAACAGTTGGA +
Preference number: 4 (lower is better)
Translates to: SGHNIRILIDILDKLYKADSDQI*CSTTVG
Trigger: TCCAACTGTTGTGCTGCAGCAGATTTGGTCTGAGTC...GGCCTTGTACAACTTATCCAGAATGTCTATTAGGATTCTAATGTTATGTCCACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS-3UTR GCA 90 bp AGTGGACATAACATTAGAATCCTAATAGACATTCTGGATAAGTTGTACAAGGCCAGGGAGAATCAGGTTTaGAAATCTTCCCGGGCTGTA +
Preference number: 4 (lower is better)
Translates to: SGHNIRILIDILDKLYKARENQV*KSSRAV
Trigger: TACAGCCCGGGAAGATTTGCAAACCTGATTCTCCCT...GGCCTTGTACAACTTATCCAGAATGTCTATTAGGATTCTAATGTTATGTCCACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS-3UTR GCA 90 bp AGTGGACATAACATTAGAATCCTAATAGACATTCTGGATAAGTTGTACAAGGCCCGACTCTTCAAATTGTaGTCTGTGCAGGCTATGGAG +
Preference number: 4 (lower is better)
Translates to: SGHNIRILIDILDKLYKARLFKL*SVQAME
Trigger: CTCCATAGCCTGCACAGAGCACAATTTGAAGAGTCG...GGCCTTGTACAACTTATCCAGAATGTCTATTAGGATTCTAATGTTATGTCCACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS-3UTR GCA 90 bp AGTGGACATAACATTAGAATCCTAATAGACATTCTGGATAAGTTGTACAAGGCCACCTCAGATTTCGAGTaGAACAAGGGTAAGCCCCAT +
Preference number: 4 (lower is better)
Translates to: SGHNIRILIDILDKLYKATSDFE*NKGKPH
Trigger: ATGGGGCTTACCCTTGTTGCACTCGAAATCTGAGGT...GGCCTTGTACAACTTATCCAGAATGTCTATTAGGATTCTAATGTTATGTCCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302490.12
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR CCA 90 bp AGTGGACATAACATTAGAATCCTAATAGACATTCTGGATAAGTTGTACAAGGCCGGACAATTTCTTCCATaGGAGTGTTACTGTCCGGTC +
Preference number: 4 (lower is better)
Translates to: SGHNIRILIDILDKLYKAGQFLP*ECYCPV
Trigger: GACCGGACAGTAACACTCCCATGGAAGAAATTGTCC...GGCCTTGTACAACTTATCCAGAATGTCTATTAGGATTCTAATGTTATGTCCACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302490.12
ENST00000471742.5
ENST00000490337.6
CDS-3UTR CCA 90 bp ATCACATTTCCCATTAGACAGCACCTCAGCTCCTCTATACATACAGCAGTTCGCAGTGATTCAAAAGACTaGTTAGTAACACCTTTCTGT +
Preference number: 4 (lower is better)
Translates to: ITFPIRQHLSSSIHTAVRSDSKD*LVTPFC
Trigger: ACAGAAAGGTGTTACTAACCAGTCTTTTGAATCACT...GCGAACTGCTGTATGTATAGAGGAGCTGAGGTGCTGTCTAATGGGAAATGTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302490.12
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR CCA 90 bp GTTGTGAGTTTTCAGATGTGCACAGTGGTAGCGACAGCAGACACCTCAAAGAATTTTTCACAAAGCCAGTaGTTGACTTTCATGTTAACA +
Preference number: 4 (lower is better)
Translates to: VVSFQMCTVVATADTSKNFSQSQ*LTFMLT
Trigger: TGTTAACATGAAAGTCAACCACTGGCTTTGTGAAAA...ATTCTTTGAGGTGTCTGCTGTCGCTACCACTGTGCACATCTGAAAACTCACAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000302490.12
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR CCA 90 bp GATTTTCTTGGTTGTGAGTTTTCAGATGTGCACAGTGGTAGCGACAGCAGACACTTTTCACAAAGCCAGTaGTTGACTTTCATGTTAACA +
Preference number: 4 (lower is better)
Translates to: DFLGCEFSDVHSGSDSRHFSQSQ*LTFMLT
Trigger: TGTTAACATGAAAGTCAACCACTGGCTTTGTGAAAA...GTGTCTGCTGTCGCTACCACTGTGCACATCTGAAAACTCACAACCAAGAAAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000302490.12
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR TCA 90 bp AGTTGTACAAGGCCATTCTTGGGGCCAAGCAACAGTAAATATTTGAAAGGTAATCTCATTTACCACATGTaGTGTCATCTTTGGGAGAAC +
Preference number: 4 (lower is better)
Translates to: SCTRPFLGPSNSKYLKGNLIYHM*CHLWEN
Trigger: GTTCTCCCAAAGATGACATCACATGTGGTAAATGAG...ATTACCTTTCAAATATTTACTGTTGCTTGGCCCCAAGAATGGCCTTGTACAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302490.12
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR TCA 90 bp AGTTGTACAAGGCCATTCTTGGGGCCAAGCAACAGTAAATATTTGAAAGGTAATAGAAACTCTGAGTCCTaGTTTTCCAAGATTCCTGTG +
Preference number: 4 (lower is better)
Translates to: SCTRPFLGPSNSKYLKGNRNSES*FSKIPV
Trigger: CACAGGAATCTTGGAAAATCAGGACTCAGAGTTTCT...ATTACCTTTCAAATATTTACTGTTGCTTGGCCCCAAGAATGGCCTTGTACAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490337.6
CDS-3UTR GCA 90 bp AGTGGACATAACATTAGAATCCTAATAGACATTCTGGATAAGTTGTACAAGGCCAAACAGCCAAATCCATaGAGTGGGGGAGGTTTTTAC +
Preference number: 4 (lower is better)
Translates to: SGHNIRILIDILDKLYKAKQPNP*SGGGFY
Trigger: GTAAAAACCTCCCCCACTGCATGGATTTGGCTGTTT...GGCCTTGTACAACTTATCCAGAATGTCTATTAGGATTCTAATGTTATGTCCACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS-3UTR GCA 90 bp AGTGGACATAACATTAGAATCCTAATAGACATTCTGGATAAGTTGTACAAGGCCATCTATAGTCCTTCTTaGTGTAGGGCTTGTTGCGCA +
Preference number: 4 (lower is better)
Translates to: SGHNIRILIDILDKLYKAIYSPS*CRACCA
Trigger: TGCGCAACAAGCCCTACAGCAAGAAGGACTATAGAT...GGCCTTGTACAACTTATCCAGAATGTCTATTAGGATTCTAATGTTATGTCCACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302490.12
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR CCA 90 bp AGTGGACATAACATTAGAATCCTAATAGACATTCTGGATAAGTTGTACAAGGCCACCATGCAGCTTCTGTaGTTCATGCATTGCCTTATG +
Preference number: 4 (lower is better)
Translates to: SGHNIRILIDILDKLYKATMQLL*FMHCLM
Trigger: CATAAGGCAATGCATGAACCACAGAAGCTGCATGGT...GGCCTTGTACAACTTATCCAGAATGTCTATTAGGATTCTAATGTTATGTCCACT
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302490.12
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR TCA 90 bp AGTTGTACAAGGCCATTCTTGGGGCCAAGCAACAGTAAATATTTGAAAGGTAATTCATGCATTGCCTTATaGTCTATAGTCCTTCTTGCT +
Preference number: 4 (lower is better)
Translates to: SCTRPFLGPSNSKYLKGNSCIAL*SIVLLA
Trigger: AGCAAGAAGGACTATAGATCATAAGGCAATGCATGA...ATTACCTTTCAAATATTTACTGTTGCTTGGCCCCAAGAATGGCCTTGTACAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302490.12
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR TCA 90 bp AGTGGACATAACATTAGAATCCTAATAGACATTCTGGATAAGTTGTACAAGGCCCAGCAAGCTGCTAAGTaGTTCAAAAGACTGGTTAGT +
Preference number: 4 (lower is better)
Translates to: SGHNIRILIDILDKLYKAQQAAK*FKRLVS
Trigger: ACTAACCAGTCTTTTGAATCACTTAGCAGCTTGCTG...GGCCTTGTACAACTTATCCAGAATGTCTATTAGGATTCTAATGTTATGTCCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302490.12
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR TCA 90 bp AGTGGACATAACATTAGAATCCTAATAGACATTCTGGATAAGTTGTACAAGGCCGGATTTTCTTGGTTGTaGGTTTTCAGATGTGCACAG +
Preference number: 4 (lower is better)
Translates to: SGHNIRILIDILDKLYKAGFSWL*VFRCAQ
Trigger: CTGTGCACATCTGAAAACTCACAACCAAGAAAATCC...GGCCTTGTACAACTTATCCAGAATGTCTATTAGGATTCTAATGTTATGTCCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302490.12
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR GCA 90 bp AGTGGACATAACATTAGAATCCTAATAGACATTCTGGATAAGTTGTACAAGGCCTGCTGTAGGGCTTGTTaGGCAGTATGTTATCAATCT +
Preference number: 4 (lower is better)
Translates to: SGHNIRILIDILDKLYKACCRAC*AVCYQS
Trigger: AGATTGATAACATACTGCGCAACAAGCCCTACAGCA...GGCCTTGTACAACTTATCCAGAATGTCTATTAGGATTCTAATGTTATGTCCACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302490.12
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR GCA 90 bp AGTTGTACAAGGCCATTCTTGGGGCCAAGCAACAGTAAATATTTGAAAGGTAATCTGTGGTTCATGCATTaGCTTATGATCTATAGTCCT +
Preference number: 4 (lower is better)
Translates to: SCTRPFLGPSNSKYLKGNLWFMH*LMIYSP
Trigger: AGGACTATAGATCATAAGGCAATGCATGAACCACAG...ATTACCTTTCAAATATTTACTGTTGCTTGGCCCCAAGAATGGCCTTGTACAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302490.12
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR TCA 90 bp AGTTGTACAAGGCCATTCTTGGGGCCAAGCAACAGTAAATATTTGAAAGGTAATTCCAAGCAAGACTTTTaGGTGAAGATACTGCTTTTT +
Preference number: 4 (lower is better)
Translates to: SCTRPFLGPSNSKYLKGNSKQDF*VKILLF
Trigger: AAAAAGCAGTATCTTCACTCAAAAGTCTTGCTTGGA...ATTACCTTTCAAATATTTACTGTTGCTTGGCCCCAAGAATGGCCTTGTACAACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302490.12
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR TCA 90 bp AGTGGACATAACATTAGAATCCTAATAGACATTCTGGATAAGTTGTACAAGGCCTGCAACGAAATTCCATaGACACGTAGAAACTTTTCC +
Preference number: 4 (lower is better)
Translates to: SGHNIRILIDILDKLYKACNEIP*TRRNFS
Trigger: GGAAAAGTTTCTACGTGTTCATGGAATTTCGTTGCA...GGCCTTGTACAACTTATCCAGAATGTCTATTAGGATTCTAATGTTATGTCCACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471742.5
CDS-3UTR GCA 90 bp AGTTGTACAAGGCCATTCTTGGGGCCAAGCAACAGTAAATATTTGAAAGGTAATCATATTGAACTGTCTTaGTACAGAATAGGCTTCCAT +
Preference number: 4 (lower is better)
Translates to: SCTRPFLGPSNSKYLKGNHIELS*YRIGFH
Trigger: ATGGAAGCCTATTCTGTAGCAAGACAGTTCAATATG...ATTACCTTTCAAATATTTACTGTTGCTTGGCCCCAAGAATGGCCTTGTACAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302490.12
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR GCA 90 bp AGTGGACATAACATTAGAATCCTAATAGACATTCTGGATAAGTTGTACAAGGCCAACTTGCAGAAGTTGTaGCTACAAGCAGTTGAAAGT +
Preference number: 4 (lower is better)
Translates to: SGHNIRILIDILDKLYKANLQKL*LQAVES
Trigger: ACTTTCAACTGCTTGTAGGCACAACTTCTGCAAGTT...GGCCTTGTACAACTTATCCAGAATGTCTATTAGGATTCTAATGTTATGTCCACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302490.12
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR GCA 90 bp AGTGGACATAACATTAGAATCCTAATAGACATTCTGGATAAGTTGTACAAGGCCAGACTCACTGTATCTTaGTGTGAATACCTTGGGTTA +
Preference number: 4 (lower is better)
Translates to: SGHNIRILIDILDKLYKARLTVS*CEYLGL
Trigger: TAACCCAAGGTATTCACAGCAAGATACAGTGAGTCT...GGCCTTGTACAACTTATCCAGAATGTCTATTAGGATTCTAATGTTATGTCCACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471742.5
CDS-3UTR TCA 90 bp AGTGGACATAACATTAGAATCCTAATAGACATTCTGGATAAGTTGTACAAGGCCTCCAAGCAAGACTTTTaGGTGAAGATACTGCTTTTT +
Preference number: 4 (lower is better)
Translates to: SGHNIRILIDILDKLYKASKQDF*VKILLF
Trigger: AAAAAGCAGTATCTTCACTCAAAAGTCTTGCTTGGA...GGCCTTGTACAACTTATCCAGAATGTCTATTAGGATTCTAATGTTATGTCCACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302490.12
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR GCA 90 bp AGTGGACATAACATTAGAATCCTAATAGACATTCTGGATAAGTTGTACAAGGCCAAGCTAATTGCACGGTaGTTAACTTTAAGACTCACT +
Preference number: 4 (lower is better)
Translates to: SGHNIRILIDILDKLYKAKLIAR*LTLRLT
Trigger: AGTGAGTCTTAAAGTTAAGCACCGTGCAATTAGCTT...GGCCTTGTACAACTTATCCAGAATGTCTATTAGGATTCTAATGTTATGTCCACT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471742.5
CDS TCA 90 bp CATGGTGACTGCACGCAGCCCTTCGCGGAGCCGGTCCGCGGTGTCTaGATGCGGGCTCGCTTCTGGGCGATGGCTCAAATCAGCGCAGGC +
Preference number: 5 (lower is better)
Translates to: HGDCTQPFAEPVRGV*MRARFWAMAQISAG
Trigger: GCCTGCGCTGATTTGAGCCATCGCCCAGAAGCGAGCCCGCATTCAGACACCGCGGACCGGCTCCGCGAAGGGCTGCGTGCAGTCACCATG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS GCA 90 bp GTGACTGCACGCAGCCCTTCGCGGAGCCGGTCCGCGGTGTCTGAATaGGGGCTCGCTTCTGGGCGATGGCTCAAATCAGCGCAGGCTTAC +
Preference number: 5 (lower is better)
Translates to: VTARSPSRSRSAVSE*GLASGRWLKSAQAY
Trigger: GTAAGCCTGCGCTGATTTGAGCCATCGCCCAGAAGCGAGCCCGCATTCAGACACCGCGGACCGGCTCCGCGAAGGGCTGCGTGCAGTCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS CCA 90 bp GCATCCCAAGAAGCAGCTAATCGCAAGCGGGTCCCCTCGGACTGGTaGTCTCCATCCACTCCGGCTGTCAGCTCCCTCCCGCCTCCGCTC +
Preference number: 5 (lower is better)
Translates to: ASQEAANRKRVPSDW*SPSTPAVSSLPPPL
Trigger: GAGCGGAGGCGGGAGGGAGCTGACAGCCGGAGTGGATGGAGACCACCAGTCCGAGGGGACCCGCTTGCGATTAGCTGCTTCTTGGGATGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS CCA 90 bp GGAGCATCCCAAGAAGCAGCTAATCGCAAGCGGGTCCCCTCGGACTaGTGGTCTCCATCCACTCCGGCTGTCAGCTCCCTCCCGCCTCCG +
Preference number: 5 (lower is better)
Translates to: GASQEAANRKRVPSD*WSPSTPAVSSLPPP
Trigger: CGGAGGCGGGAGGGAGCTGACAGCCGGAGTGGATGGAGACCACCAGTCCGAGGGGACCCGCTTGCGATTAGCTGCTTCTTGGGATGCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS CCA 90 bp CGGAGCCGGTCCGCGGTGTCTGAATGCGGGCTCGCTTCTGGGCGATaGCTCAAATCAGCGCAGGCTTACCGCAAGATGCGCCGCCAGCAT +
Preference number: 5 (lower is better)
Translates to: RSRSAVSECGLASGR*LKSAQAYRKMRRQH
Trigger: ATGCTGGCGGCGCATCTTGCGGTAAGCCTGCGCTGATTTGAGCCATCGCCCAGAAGCGAGCCCGCATTCAGACACCGCGGACCGGCTCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS GCA 90 bp CAGGCTGCGCGCGATGATAGCGACCGTGCGGAATTTGGCCCGGGCTaGGTTCACCACATTGGGGGCGGTGGAGCTCTGCTTGCTCAGAAG +
Preference number: 5 (lower is better)
Translates to: QAARDDSDRAEFGPG*VHHIGGGGALLAQK
Trigger: CTTCTGAGCAAGCAGAGCTCCACCGCCCCCAATGTGGTGAACGCAGCCCGGGCCAAATTCCGCACGGTCGCTATCATCGCGCGCAGCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302490.12
ENST00000389634.5
ENST00000489036.5
ENST00000618897.4
CDS CCA 90 bp AGATGCGCCGCCAGCATCCCCTGGACCACAGGCAGGATGCTCAACTaGCGCGCGGAGCATCCCAAGAAGCAGCTAATCGCAAGCGGGTCC +
Preference number: 5 (lower is better)
Translates to: RCAASIPWTTGRMLN*RAEHPKKQLIASGS
Trigger: GGACCCGCTTGCGATTAGCTGCTTCTTGGGATGCTCCGCGCGCCAGTTGAGCATCCTGCCTGTGGTCCAGGGGATGCTGGCGGCGCATCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS TCA 90 bp CTCAAGACCCCTCCCCACTCATTCTCGAGCGAAAGCCTGGGTTGCTaGGCCTGCACCGACACGGGTTTGCAGCTGCACGGAGGAGCAGGC +
Preference number: 5 (lower is better)
Translates to: LKTPPHSFSSESLGC*ACTDTGLQLHGGAG
Trigger: GCCTGCTCCTCCGTGCAGCTGCAAACCCGTGTCGGTGCAGGCTCAGCAACCCAGGCTTTCGCTCGAGAATGAGTGGGGAGGGGTCTTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS CCA 90 bp TCAAATCAGCGCAGGCTTACCGCAAGATGCGCCGCCAGCATCCCCTaGACCACAGGCAGGATGCTCAACTGGCGCGCGGAGCATCCCAAG +
Preference number: 5 (lower is better)
Translates to: SNQRRLTARCAASIP*TTGRMLNWRAEHPK
Trigger: CTTGGGATGCTCCGCGCGCCAGTTGAGCATCCTGCCTGTGGTCCAGGGGATGCTGGCGGCGCATCTTGCGGTAAGCCTGCGCTGATTTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS GCA 90 bp TCGCTTCTGGGCGATGGCTCAAATCAGCGCAGGCTTACCGCAAGATaGGCCGCCAGCATCCCCTGGACCACAGGCAGGATGCTCAACTGG +
Preference number: 5 (lower is better)
Translates to: SLLGDGSNQRRLTAR*AASIPWTTGRMLNW
Trigger: CCAGTTGAGCATCCTGCCTGTGGTCCAGGGGATGCTGGCGGCGCATCTTGCGGTAAGCCTGCGCTGATTTGAGCCATCGCCCAGAAGCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS CCA 90 bp CCGTGCGGAATTTGGCCCGGGCTGCGTTCACCACATTGGGGGCGGTaGAGCTCTGCTTGCTCAGAAGTCGGTCCTCACCATTCCGACTCT +
Preference number: 5 (lower is better)
Translates to: PCGIWPGLRSPHWGR*SSACSEVGPHHSDS
Trigger: AGAGTCGGAATGGTGAGGACCGACTTCTGAGCAAGCAGAGCTCCACCGCCCCCAATGTGGTGAACGCAGCCCGGGCCAAATTCCGCACGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302490.12
ENST00000389634.5
ENST00000489036.5
ENST00000618897.4
CDS GCA 90 bp GCGAAAGCCTGGGTTGCTGAGCCTGCACCGACACGGGTTTGCAGCTaGACGGAGGAGCAGGCAGGTCCCTTTAAGGAGCTCTTTGCCTTT +
Preference number: 5 (lower is better)
Translates to: AKAWVAEPAPTRVCS*TEEQAGPFKELFAF
Trigger: AAAGGCAAAGAGCTCCTTAAAGGGACCTGCCTGCTCCTCCGTGCAGCTGCAAACCCGTGTCGGTGCAGGCTCAGCAACCCAGGCTTTCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS CCA 90 bp CTGCCCAGACTCAGACCAAATCTGCTGCAGCACAACAGTTGGAACTaGGGGAAGGCAGAGAGGGGGTGCTTATGCCGCGGAACACGCCAG +
Preference number: 5 (lower is better)
Translates to: LPRLRPNLLQHNSWN*GKAERGCLCRGTRQ
Trigger: CTGGCGTGTTCCGCGGCATAAGCACCCCCTCTCTGCCTTCCCCCAGTTCCAACTGTTGTGCTGCAGCAGATTTGGTCTGAGTCTGGGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000618897.4
CDS-3UTR CAA 90 bp CAGCCTTCTTTGAGTTACCAAATGCCTGAAGGTAGTACCACACCCCCTGGCCCCGCTGCGTTCACCACATaGGGGGCGGTGGAGCTCTGC +
Preference number: 5 (lower is better)
Translates to: QPSLSYQMPEGSTTPPGPAAFTT*GAVELC
Trigger: GCAGAGCTCCACCGCCCCCAATGTGGTGAACGCAGC...GGGGCCAGGGGGTGTGGTACTACCTTCAGGCATTTGGTAACTCAAAGAAGGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS GCA 90 bp TGGCCCGGGCTGCGTTCACCACATTGGGGGCGGTGGAGCTCTGCTTaGTCAGAAGTCGGTCCTCACCATTCCGACTCTTCAAATTGTGCT +
Preference number: 5 (lower is better)
Translates to: WPGLRSPHWGRWSSA*SEVGPHHSDSSNCA
Trigger: AGCACAATTTGAAGAGTCGGAATGGTGAGGACCGACTTCTGAGCAAGCAGAGCTCCACCGCCCCCAATGTGGTGAACGCAGCCCGGGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302490.12
ENST00000389634.5
ENST00000489036.5
ENST00000618897.4
CDS CCA 90 bp GATTCCTGTGCGGCATGCCTGTGGTGCAGACGGTGGTGTGCTCGCTaGACAGGTCGCAGAGCTTTAGGTACCAGTTCATCTCCACTTCGC +
Preference number: 5 (lower is better)
Translates to: DSCAACLWCRRWCAR*TGRRALGTSSSPLR
Trigger: GCGAAGTGGAGATGAACTGGTACCTAAAGCTCTGCGACCTGTCCAGCGAGCACACCACCGTCTGCACCACAGGCATGCCGCACAGGAATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389636.9
ENST00000490337.6
CDS-3UTR CAA 90 bp CAGCCTTCTTTGAGTTACCAAATGCCTGAAGGTAGTACCACACCCCCTGGCCCCGAGCGAAAGCCTGGGTaGCTGAGCCTGCACCGACAC +
Preference number: 5 (lower is better)
Translates to: QPSLSYQMPEGSTTPPGPERKPG*LSLHRH
Trigger: GTGTCGGTGCAGGCTCAGCAACCCAGGCTTTCGCTC...GGGGCCAGGGGGTGTGGTACTACCTTCAGGCATTTGGTAACTCAAAGAAGGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS-3UTR CAA 90 bp CTGAAGGTAGTACCACACCCCCTGGCCCCCATATTCTTCCCATTGCATAAGCATGCGCAGCAGAGCCAGTaGACGCGCCCTGAGCTGGCT +
Preference number: 5 (lower is better)
Translates to: LKVVPHPLAPIFFPLHKHAQQSQ*TRPELA
Trigger: AGCCAGCTCAGGGCGCGTCAACTGGCTCTGCTGCGC...ATGCTTATGCAATGGGAAGAATATGGGGGCCAGGGGGTGTGGTACTACCTTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000389636.9
ENST00000490337.6
CDS GCA 90 bp CCGACTCTTCAAATTGTGCTCTGTGCAGGCTATGGAGACTTGCATTaGTTCCCCAGGCAGCGCACGGTCCCTCTCAGAACCCCAGAACAC +
Preference number: 5 (lower is better)
Translates to: PTLQIVLCAGYGDLH*FPRQRTVPLRTPEH
Trigger: GTGTTCTGGGGTTCTGAGAGGGACCGTGCGCTGCCTGGGGAAGCAATGCAAGTCTCCATAGCCTGCACAGAGCACAATTTGAAGAGTCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS GCA 90 bp CCATTCCGACTCTTCAAATTGTGCTCTGTGCAGGCTATGGAGACTTaGATTGCTTCCCCAGGCAGCGCACGGTCCCTCTCAGAACCCCAG +
Preference number: 5 (lower is better)
Translates to: PFRLFKLCSVQAMET*IASPGSARSLSEPQ
Trigger: CTGGGGTTCTGAGAGGGACCGTGCGCTGCCTGGGGAAGCAATGCAAGTCTCCATAGCCTGCACAGAGCACAATTTGAAGAGTCGGAATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS GCA 90 bp AATTTGGCCCGGGCTGCGTTCACCACATTGGGGGCGGTGGAGCTCTaGTTGCTCAGAAGTCGGTCCTCACCATTCCGACTCTTCAAATTG +
Preference number: 5 (lower is better)
Translates to: NLARAAFTTLGAVEL*LLRSRSSPFRLFKL
Trigger: CAATTTGAAGAGTCGGAATGGTGAGGACCGACTTCTGAGCAAGCAGAGCTCCACCGCCCCCAATGTGGTGAACGCAGCCCGGGCCAAATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302490.12
ENST00000389634.5
ENST00000489036.5
ENST00000618897.4
CDS GCA 90 bp TTTCCAAGATTCCTGTGCGGCATGCCTGTGGTGCAGACGGTGGTGTaGTCGCTGGACAGGTCGCAGAGCTTTAGGTACCAGTTCATCTCC +
Preference number: 5 (lower is better)
Translates to: FPRFLCGMPVVQTVV*SLDRSQSFRYQFIS
Trigger: GGAGATGAACTGGTACCTAAAGCTCTGCGACCTGTCCAGCGAGCACACCACCGTCTGCACCACAGGCATGCCGCACAGGAATCTTGGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389636.9
ENST00000490337.6
CDS GCA 90 bp TCGCTGAAAAAGGCAGTGAAGAGAGTAGGAAAGACAGCGGTGAATTaGCGATGCCACCCTTCTCCCACCCCACAGCAGCAGCTGCATGGC +
Preference number: 5 (lower is better)
Translates to: SLKKAVKRVGKTAVN*RCHPSPTPQQQLHG
Trigger: GCCATGCAGCTGCTGCTGTGGGGTGGGAGAAGGGTGGCATCGGCAATTCACCGCTGTCTTTCCTACTCTCTTCACTGCCTTTTTCAGCGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475456.5
CDS GCA 90 bp TTTCCACATATTTCTGTTCGGCTGCTCCACTGGGCCTCACAGGTTTaGAGGCCGCCTGAGGCTGAGTCTTGGTCACTGCTAGGTGCCATC +
Preference number: 5 (lower is better)
Translates to: FPHISVRLLHWASQV*RPPEAESWSLLGAI
Trigger: GATGGCACCTAGCAGTGACCAAGACTCAGCCTCAGGCGGCCTGCAAACCTGTGAGGCCCAGTGGAGCAGCCGAACAGAAATATGTGGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471742.5
CDS CCA 90 bp GGTCCTCACCATTCCGACTCTTCAAATTGTGCTCTGTGCAGGCTATaGAGACTTGCATTGCTTCCCCAGGCAGCGCACGGTCCCTCTCAG +
Preference number: 5 (lower is better)
Translates to: GPHHSDSSNCALCRL*RLALLPQAAHGPSQ
Trigger: CTGAGAGGGACCGTGCGCTGCCTGGGGAAGCAATGCAAGTCTCCATAGCCTGCACAGAGCACAATTTGAAGAGTCGGAATGGTGAGGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS CCA 90 bp CTGATTTTCCAAGATTCCTGTGCGGCATGCCTGTGGTGCAGACGGTaGTGTGCTCGCTGGACAGGTCGCAGAGCTTTAGGTACCAGTTCA +
Preference number: 5 (lower is better)
Translates to: LIFQDSCAACLWCRR*CARWTGRRALGTSS
Trigger: TGAACTGGTACCTAAAGCTCTGCGACCTGTCCAGCGAGCACACCACCGTCTGCACCACAGGCATGCCGCACAGGAATCTTGGAAAATCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389636.9
ENST00000490337.6
CDS-3UTR CAA 90 bp TACTGGGCACAGGCCGCTATTTTAACCATGCAGCTTCTGTGGTTCATGCATTGCTGCACCGACACGGGTTaGCAGCTGCACGGAGGAGCA +
Preference number: 5 (lower is better)
Translates to: YWAQAAILTMQLLWFMHCCTDTG*QLHGGA
Trigger: TGCTCCTCCGTGCAGCTGCAAACCCGTGTCGGTGCA...GCAATGCATGAACCACAGAAGCTGCATGGTTAAAATAGCGGCCTGTGCCCAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS-3UTR CAA 90 bp TACTGGGCACAGGCCGCTATTTTAACCATGCAGCTTCTGTGGTTCATGCATTGCGAGCGAAAGCCTGGGTaGCTGAGCCTGCACCGACAC +
Preference number: 5 (lower is better)
Translates to: YWAQAAILTMQLLWFMHCERKPG*LSLHRH
Trigger: GTGTCGGTGCAGGCTCAGCAACCCAGGCTTTCGCTC...GCAATGCATGAACCACAGAAGCTGCATGGTTAAAATAGCGGCCTGTGCCCAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS-3UTR CAA 90 bp CAGACACCTCAAAGAATCCAGGGAGGGACACTAGAGGTTGAGCAGCAAGCTGCTCTATGGAGACTTGCATaGCTTCCCCAGGCAGCGCAC +
Preference number: 5 (lower is better)
Translates to: QTPQRIQGGTLEVEQQAALWRLA*LPQAAH
Trigger: GTGCGCTGCCTGGGGAAGCAATGCAAGTCTCCATAG...AGCAGCTTGCTGCTCAACCTCTAGTGTCCCTCCCTGGATTCTTTGAGGTGTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS-3UTR CAA 90 bp CAGACACCTCAAAGAATCCAGGGAGGGACACTAGAGGTTGAGCAGCAAGCTGCTGCAGGCTATGGAGACTaGCATTGCTTCCCCAGGCAG +
Preference number: 5 (lower is better)
Translates to: QTPQRIQGGTLEVEQQAAAGYGD*HCFPRQ
Trigger: CTGCCTGGGGAAGCAATGCAAGTCTCCATAGCCTGC...AGCAGCTTGCTGCTCAACCTCTAGTGTCCCTCCCTGGATTCTTTGAGGTGTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS-3UTR CAA 90 bp TGTGTCATGGCTCGGACAATTTCTTCCATGGGAGTGTTACTGTCCGGTCGATTTGCTGCGTTCACCACATaGGGGGCGGTGGAGCTCTGC +
Preference number: 5 (lower is better)
Translates to: CVMARTISSMGVLLSGRFAAFTT*GAVELC
Trigger: GCAGAGCTCCACCGCCCCCAATGTGGTGAACGCAGC...AAATCGACCGGACAGTAACACTCCCATGGAAGAAATTGTCCGAGCCATGACACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489036.5
CDS-3UTR CAA 90 bp CTGGCCCCCATATTCTTCCCATTGCATAAGCATGAGGTGTATACAGCAATGCAAGCGACCGTGCGGAATTaGGCCCGGGCTGCGTTCACC +
Preference number: 5 (lower is better)
Translates to: LAPIFFPLHKHEVYTAMQATVRN*ARAAFT
Trigger: GGTGAACGCAGCCCGGGCCAAATTCCGCACGGTCGC...TTGCATTGCTGTATACACCTCATGCTTATGCAATGGGAAGAATATGGGGGCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS-3UTR CAA 90 bp ATCACATTTCCCATTAGACAGCACCTCAGCTCCTCTATACATACAGCAGTTCGCGCGCAGCAGAGCCAGTaGACGCGCCCTGAGCTGGCT +
Preference number: 5 (lower is better)
Translates to: ITFPIRQHLSSSIHTAVRAQQSQ*TRPELA
Trigger: AGCCAGCTCAGGGCGCGTCAACTGGCTCTGCTGCGC...GCGAACTGCTGTATGTATAGAGGAGCTGAGGTGCTGTCTAATGGGAAATGTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490337.6
CDS TCA 90 bp TGGGACCTTAACATTGCCTTGCTGGACAGCCACATGCAGGTGCTCTaGTCAGTAGCCCCAGCTGAGTTTCCAGACAACAGCCAGCTTGAG +
Preference number: 5 (lower is better)
Translates to: WDLNIALLDSHMQVL*SVAPAEFPDNSQLE
Trigger: CTCAAGCTGGCTGTTGTCTGGAAACTCAGCTGGGGCTACTGATCAGAGCACCTGCATGTGGCTGTCCAGCAAGGCAATGTTAAGGTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477912.5
CDS GCA 90 bp TCAGAAGTCGGTCCTCACCATTCCGACTCTTCAAATTGTGCTCTGTaGAGGCTATGGAGACTTGCATTGCTTCCCCAGGCAGCGCACGGT +
Preference number: 5 (lower is better)
Translates to: SEVGPHHSDSSNCAL*RLWRLALLPQAAHG
Trigger: ACCGTGCGCTGCCTGGGGAAGCAATGCAAGTCTCCATAGCCTGCACAGAGCACAATTTGAAGAGTCGGAATGGTGAGGACCGACTTCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS GCA 90 bp AAAAAGGCAGTGAAGAGAGTAGGAAAGACAGCGGTGAATTGCCGATaGCACCCTTCTCCCACCCCACAGCAGCAGCTGCATGGCATGGAA +
Preference number: 5 (lower is better)
Translates to: KKAVKRVGKTAVNCR*HPSPTPQQQLHGME
Trigger: TTCCATGCCATGCAGCTGCTGCTGTGGGGTGGGAGAAGGGTGGCATCGGCAATTCACCGCTGTCTTTCCTACTCTCTTCACTGCCTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475456.5
CDS CCA 90 bp GGACCCAGAGAAGTAAACAGACGGCCCCGAAGTTGTCACAGCAGCTaGAGGGAGAATCAGGTTTGCAAATCTTCCCGGGCTGTAATCTCG +
Preference number: 5 (lower is better)
Translates to: GPREVNRRPRSCHSS*RENQVCKSSRAVIS
Trigger: CGAGATTACAGCCCGGGAAGATTTGCAAACCTGATTCTCCCTCCAGCTGCTGTGACAACTTCGGGGCCGTCTGTTTACTTCTCTGGGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS-3UTR CAA 90 bp CAGCCTTCTTTGAGTTACCAAATGCCTGAAGGTAGTACCACACCCCCTGGCCCCGAGGGAGAATCAGGTTaGCAAATCTTCCCGGGCTGT +
Preference number: 5 (lower is better)
Translates to: QPSLSYQMPEGSTTPPGPEGESG*QIFPGC
Trigger: ACAGCCCGGGAAGATTTGCAAACCTGATTCTCCCTC...GGGGCCAGGGGGTGTGGTACTACCTTCAGGCATTTGGTAACTCAAAGAAGGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS-3UTR CAA 90 bp AACACCTTTCTGTACTGGGCACAGGCCGCTATTTTAACCATGCAGCTTCTGTGGGCGGTGGAGCTCTGCTaGCTCAGAAGTCGGTCCTCA +
Preference number: 5 (lower is better)
Translates to: NTFLYWAQAAILTMQLLWAVELC*LRSRSS
Trigger: TGAGGACCGACTTCTGAGCAAGCAGAGCTCCACCGC...CCACAGAAGCTGCATGGTTAAAATAGCGGCCTGTGCCCAGTACAGAAAGGTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS-3UTR CAA 90 bp TACTGGGCACAGGCCGCTATTTTAACCATGCAGCTTCTGTGGTTCATGCATTGCGCGGTGGAGCTCTGCTaGCTCAGAAGTCGGTCCTCA +
Preference number: 5 (lower is better)
Translates to: YWAQAAILTMQLLWFMHCAVELC*LRSRSS
Trigger: TGAGGACCGACTTCTGAGCAAGCAGAGCTCCACCGC...GCAATGCATGAACCACAGAAGCTGCATGGTTAAAATAGCGGCCTGTGCCCAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS-3UTR CAA 90 bp CTGGCCCCCATATTCTTCCCATTGCATAAGCATGAGGTGTATACAGCAATGCAAGCTGCGTTCACCACATaGGGGGCGGTGGAGCTCTGC +
Preference number: 5 (lower is better)
Translates to: LAPIFFPLHKHEVYTAMQAAFTT*GAVELC
Trigger: GCAGAGCTCCACCGCCCCCAATGTGGTGAACGCAGC...TTGCATTGCTGTATACACCTCATGCTTATGCAATGGGAAGAATATGGGGGCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS-3UTR CAA 90 bp TTCTGTTTCAGCTTTTCCACCCCAGTAGAGTTTGGTTGTTATGACCAGACTGGAGCGACCGTGCGGAATTaGGCCCGGGCTGCGTTCACC +
Preference number: 5 (lower is better)
Translates to: FCFSFSTPVEFGCYDQTGATVRN*ARAAFT
Trigger: GGTGAACGCAGCCCGGGCCAAATTCCGCACGGTCGC...TCCAGTCTGGTCATAACAACCAAACTCTACTGGGGTGGAAAAGCTGAAACAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489036.5
CDS GCA 90 bp TGCTTGCTCAGAAGTCGGTCCTCACCATTCCGACTCTTCAAATTGTaGTCTGTGCAGGCTATGGAGACTTGCATTGCTTCCCCAGGCAGC +
Preference number: 5 (lower is better)
Translates to: CLLRSRSSPFRLFKL*SVQAMETCIASPGS
Trigger: GCTGCCTGGGGAAGCAATGCAAGTCTCCATAGCCTGCACAGAGCACAATTTGAAGAGTCGGAATGGTGAGGACCGACTTCTGAGCAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS CCA 90 bp GAACACGTAGAAACTTTTCCACATATTTCTGTTCGGCTGCTCCACTaGGCCTCACAGGTTTGCAGGCCGCCTGAGGCTGAGTCTTGGTCA +
Preference number: 5 (lower is better)
Translates to: EHVETFPHISVRLLH*ASQVCRPPEAESWS
Trigger: TGACCAAGACTCAGCCTCAGGCGGCCTGCAAACCTGTGAGGCCCAGTGGAGCAGCCGAACAGAAATATGTGGAAAAGTTTCTACGTGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471742.5
CDS-3UTR CAA 90 bp GTTGTGAGTTTTCAGATGTGCACAGTGGTAGCGACAGCAGACACCTCAAAGAATTGCACCGACACGGGTTaGCAGCTGCACGGAGGAGCA +
Preference number: 5 (lower is better)
Translates to: VVSFQMCTVVATADTSKNCTDTG*QLHGGA
Trigger: TGCTCCTCCGTGCAGCTGCAAACCCGTGTCGGTGCA...ATTCTTTGAGGTGTCTGCTGTCGCTACCACTGTGCACATCTGAAAACTCACAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS-3UTR CAA 90 bp GTTGTGAGTTTTCAGATGTGCACAGTGGTAGCGACAGCAGACACCTCAAAGAATCAGACGGCCCCGAAGTaGTCACAGCAGCTGGAGGGA +
Preference number: 5 (lower is better)
Translates to: VVSFQMCTVVATADTSKNQTAPK*SQQLEG
Trigger: TCCCTCCAGCTGCTGTGACAACTTCGGGGCCGTCTG...ATTCTTTGAGGTGTCTGCTGTCGCTACCACTGTGCACATCTGAAAACTCACAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS-3UTR CAA 90 bp GATTTTCTTGGTTGTGAGTTTTCAGATGTGCACAGTGGTAGCGACAGCAGACACCAGACGGCCCCGAAGTaGTCACAGCAGCTGGAGGGA +
Preference number: 5 (lower is better)
Translates to: DFLGCEFSDVHSGSDSRHQTAPK*SQQLEG
Trigger: TCCCTCCAGCTGCTGTGACAACTTCGGGGCCGTCTG...GTGTCTGCTGTCGCTACCACTGTGCACATCTGAAAACTCACAACCAAGAAAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS-3UTR CAA 90 bp TACTGGGCACAGGCCGCTATTTTAACCATGCAGCTTCTGTGGTTCATGCATTGCGCAGGCTATGGAGACTaGCATTGCTTCCCCAGGCAG +
Preference number: 5 (lower is better)
Translates to: YWAQAAILTMQLLWFMHCAGYGD*HCFPRQ
Trigger: CTGCCTGGGGAAGCAATGCAAGTCTCCATAGCCTGC...GCAATGCATGAACCACAGAAGCTGCATGGTTAAAATAGCGGCCTGTGCCCAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS-3UTR CAA 90 bp CAGCCTTCTTTGAGTTACCAAATGCCTGAAGGTAGTACCACACCCCCTGGCCCCCTCCAGCCTTTCTTCTaGATGATGCTCCCCAGAATC +
Preference number: 5 (lower is better)
Translates to: QPSLSYQMPEGSTTPPGPLQPFF*MMLPRI
Trigger: GATTCTGGGGAGCATCATCAAGAAGAAAGGCTGGAG...GGGGCCAGGGGGTGTGGTACTACCTTCAGGCATTTGGTAACTCAAAGAAGGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR CAA 90 bp CAGACACCTCAAAGAATCCAGGGAGGGACACTAGAGGTTGAGCAGCAAGCTGCTCCAGACGCTCCGCAATaGGGGAAAGGTCTTTTAGCT +
Preference number: 5 (lower is better)
Translates to: QTPQRIQGGTLEVEQQAAPDAPQ*GKGLLA
Trigger: AGCTAAAAGACCTTTCCCCAATTGCGGAGCGTCTGG...AGCAGCTTGCTGCTCAACCTCTAGTGTCCCTCCCTGGATTCTTTGAGGTGTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR CAA 90 bp GTTGTGAGTTTTCAGATGTGCACAGTGGTAGCGACAGCAGACACCTCAAAGAATCGACAGAGCTGTTGGTaGTGTGTCCCTGCCCAGGCC +
Preference number: 5 (lower is better)
Translates to: VVSFQMCTVVATADTSKNRQSCW*CVPAQA
Trigger: GGCCTGGGCAGGGACACACAACCAACAGCTCTGTCG...ATTCTTTGAGGTGTCTGCTGTCGCTACCACTGTGCACATCTGAAAACTCACAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471742.5
CDS-3UTR CAA 90 bp TACTGGGCACAGGCCGCTATTTTAACCATGCAGCTTCTGTGGTTCATGCATTGCCCGATTCACTGGATTTaGGCAGACCCAGCTTGGGGC +
Preference number: 5 (lower is better)
Translates to: YWAQAAILTMQLLWFMHCPIHWI*ADPAWG
Trigger: GCCCCAAGCTGGGTCTGCCAAAATCCAGTGAATCGG...GCAATGCATGAACCACAGAAGCTGCATGGTTAAAATAGCGGCCTGTGCCCAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471742.5
CDS TCA 90 bp AGATTCCTTAACATTGCCTTGCTGGACAGCCACATGCAGGTGCTCTaGTCAGTAGCCCCAGCTGAGTTTCCAGACAACAGCCAGCTTGAG +
Preference number: 5 (lower is better)
Translates to: RFLNIALLDSHMQVL*SVAPAEFPDNSQLE
Trigger: CTCAAGCTGGCTGTTGTCTGGAAACTCAGCTGGGGCTACTGATCAGAGCACCTGCATGTGGCTGTCCAGCAAGGCAATGTTAAGGAATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000472028.5
ENST00000478609.5
CDS GCA 90 bp CCTTTGTGTGCGATGGGAAGGCAAAGATCACTTGCACCAGGCTCTTaGTGTAACAAATCGGGAGGGTTGCTCCATAAAAAGGGGCTCTGC +
Preference number: 5 (lower is better)
Translates to: PLCAMGRQRSLAPGS*CNKSGGLLHKKGLC
Trigger: GCAGAGCCCCTTTTTATGGAGCAACCCTCCCGATTTGTTACAGCAAGAGCCTGGTGCAAGTGATCTTTGCCTTCCCATCGCACACAAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS-3UTR CAA 90 bp CAGACACCTCAAAGAATCCAGGGAGGGACACTAGAGGTTGAGCAGCAAGCTGCTAACAAATCGGGAGGGTaGCTCCATAAAAAGGGGCTC +
Preference number: 5 (lower is better)
Translates to: QTPQRIQGGTLEVEQQAANKSGG*LHKKGL
Trigger: GAGCCCCTTTTTATGGAGCAACCCTCCCGATTTGTT...AGCAGCTTGCTGCTCAACCTCTAGTGTCCCTCCCTGGATTCTTTGAGGTGTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS-3UTR CAA 90 bp CTGAAGGTAGTACCACACCCCCTGGCCCCCATATTCTTCCCATTGCATAAGCATGAGGGAGAATCAGGTTaGCAAATCTTCCCGGGCTGT +
Preference number: 5 (lower is better)
Translates to: LKVVPHPLAPIFFPLHKHEGESG*QIFPGC
Trigger: ACAGCCCGGGAAGATTTGCAAACCTGATTCTCCCTC...ATGCTTATGCAATGGGAAGAATATGGGGGCCAGGGGGTGTGGTACTACCTTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS-3UTR CAA 90 bp CCTTCTTTGAGTTACCAAATGCCTGAAGGTAGTACCACACCCCCTGGCCCCCATAAGATGGTACTCAGCTaGTTCACAGACCGGTGGGAT +
Preference number: 5 (lower is better)
Translates to: PSLSYQMPEGSTTPPGPHKMVLS*FTDRWD
Trigger: ATCCCACCGGTCTGTGAACAAGCTGAGTACCATCTT...ATGGGGGCCAGGGGGTGTGGTACTACCTTCAGGCATTTGGTAACTCAAAGAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR CAA 90 bp CAGACACCTCAAAGAATCCAGGGAGGGACACTAGAGGTTGAGCAGCAAGCTGCTAAGATGGTACTCAGCTaGTTCACAGACCGGTGGGAT +
Preference number: 5 (lower is better)
Translates to: QTPQRIQGGTLEVEQQAAKMVLS*FTDRWD
Trigger: ATCCCACCGGTCTGTGAACAAGCTGAGTACCATCTT...AGCAGCTTGCTGCTCAACCTCTAGTGTCCCTCCCTGGATTCTTTGAGGTGTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR CAA 90 bp GATTTTCTTGGTTGTGAGTTTTCAGATGTGCACAGTGGTAGCGACAGCAGACACTTTGGCAGACCCAGCTaGGGGCTCGGGATGTCTGCA +
Preference number: 5 (lower is better)
Translates to: DFLGCEFSDVHSGSDSRHFGRPS*GLGMSA
Trigger: TGCAGACATCCCGAGCCCCAAGCTGGGTCTGCCAAA...GTGTCTGCTGTCGCTACCACTGTGCACATCTGAAAACTCACAACCAAGAAAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000471742.5
CDS TCA 90 bp AAGCCCTGGAACTTTCAGGCACCCCGTTTCCGTATTTTCCTGAGATaGTTCCACAGGCAAGTGGAGACCATGTCATTGCGCCAACACCTA +
Preference number: 5 (lower is better)
Translates to: KPWNFQAPRFRIFLR*FHRQVETMSLRQHL
Trigger: TAGGTGTTGGCGCAATGACATGGTCTCCACTTGCCTGTGGAATCATCTCAGGAAAATACGGAAACGGGGTGCCTGAAAGTTCCAGGGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000302490.12
ENST00000389634.5
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000497291.5
ENST00000618897.4
CDS GCA 90 bp CCCAGCTTGGGGCTCGGGATGTCTGCACAGGCAGGTTTATACAGATaGATGTTTCAAAAACCCAAGGAAGCAAAGCTAATTGCACGGTGC +
Preference number: 5 (lower is better)
Translates to: PSLGLGMSAQAGLYR*MFQKPKEAKLIARC
Trigger: GCACCGTGCAATTAGCTTTGCTTCCTTGGGTTTTTGAAACATGCATCTGTATAAACCTGCCTGTGCAGACATCCCGAGCCCCAAGCTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471742.5
CDS-3UTR CAA 90 bp TCTTTGAGTTACCAAATGCCTGAAGGTAGTACCACACCCCCTGGCCCCCATATTCGAGAGGTTGAGCAGTaGCGGGGATTTCTGCTTTTC +
Preference number: 5 (lower is better)
Translates to: SLSYQMPEGSTTPPGPHIREVEQ*RGFLLF
Trigger: GAAAAGCAGAAATCCCCGCAACTGCTCAACCTCTCG...AATATGGGGGCCAGGGGGTGTGGTACTACCTTCAGGCATTTGGTAACTCAAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS-3UTR CAA 90 bp GTTGTGAGTTTTCAGATGTGCACAGTGGTAGCGACAGCAGACACCTCAAAGAATGGCAGTCACGAGAGGTaGAGCAGTTGCGGGGATTTC +
Preference number: 5 (lower is better)
Translates to: VVSFQMCTVVATADTSKNGSHER*SSCGDF
Trigger: GAAATCCCCGCAACTGCTCAACCTCTCGTGACTGCC...ATTCTTTGAGGTGTCTGCTGTCGCTACCACTGTGCACATCTGAAAACTCACAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS-3UTR CAA 90 bp ATCACATTTCCCATTAGACAGCACCTCAGCTCCTCTATACATACAGCAGTTCGCGGCAGTCACGAGAGGTaGAGCAGTTGCGGGGATTTC +
Preference number: 5 (lower is better)
Translates to: ITFPIRQHLSSSIHTAVRGSHER*SSCGDF
Trigger: GAAATCCCCGCAACTGCTCAACCTCTCGTGACTGCC...GCGAACTGCTGTATGTATAGAGGAGCTGAGGTGCTGTCTAATGGGAAATGTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS-3UTR CAA 90 bp AATCACTTCAGCCTTTCCAGCAGCATAGACTTCGGCAGTATCAAAGAGGTTAACGCGGTGGAGCTCTGCTaGCTCAGAAGTCGGTCCTCA +
Preference number: 5 (lower is better)
Translates to: NHFSLSSSIDFGSIKEVNAVELC*LRSRSS
Trigger: TGAGGACCGACTTCTGAGCAAGCAGAGCTCCACCGC...GTTAACCTCTTTGATACTGCCGAAGTCTATGCTGCTGGAAAGGCTGAAGTGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489036.5
CDS-3UTR CAA 90 bp CAGCCTTCTTTGAGTTACCAAATGCCTGAAGGTAGTACCACACCCCCTGGCCCCGTACATCGCCATGCCTaGGTTTATCACATGTGTCAT +
Preference number: 5 (lower is better)
Translates to: QPSLSYQMPEGSTTPPGPVHRHA*VYHMCH
Trigger: ATGACACATGTGATAAACCAAGGCATGGCGATGTAC...GGGGCCAGGGGGTGTGGTACTACCTTCAGGCATTTGGTAACTCAAAGAAGGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR CAA 90 bp CAGCCTTCTTTGAGTTACCAAATGCCTGAAGGTAGTACCACACCCCCTGGCCCCACCGGTGGGATCATATaGAACTGTCTTGCTACAGAA +
Preference number: 5 (lower is better)
Translates to: QPSLSYQMPEGSTTPPGPTGGII*NCLATE
Trigger: TTCTGTAGCAAGACAGTTCAATATGATCCCACCGGT...GGGGCCAGGGGGTGTGGTACTACCTTCAGGCATTTGGTAACTCAAAGAAGGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR CAA 90 bp TACTGGGCACAGGCCGCTATTTTAACCATGCAGCTTCTGTGGTTCATGCATTGCCCAGACGCTCCGCAATaGGGGAAAGGTCTTTTAGCT +
Preference number: 5 (lower is better)
Translates to: YWAQAAILTMQLLWFMHCPDAPQ*GKGLLA
Trigger: AGCTAAAAGACCTTTCCCCAATTGCGGAGCGTCTGG...GCAATGCATGAACCACAGAAGCTGCATGGTTAAAATAGCGGCCTGTGCCCAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR CAA 90 bp TACCACACCCCCTGGCCCCCATATTCTTCCCATTGCATAAGCATGAGGTGTATACCAGACGCTCCGCAATaGGGGAAAGGTCTTTTAGCT +
Preference number: 5 (lower is better)
Translates to: YHTPWPPYSSHCISMRCIPDAPQ*GKGLLA
Trigger: AGCTAAAAGACCTTTCCCCAATTGCGGAGCGTCTGG...TATACACCTCATGCTTATGCAATGGGAAGAATATGGGGGCCAGGGGGTGTGGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR CAA 90 bp CAGACACCTCAAAGAATCCAGGGAGGGACACTAGAGGTTGAGCAGCAAGCTGCTGACTGTCTCCTTAACTaGGTGTTCTCCTCTGAGATC +
Preference number: 5 (lower is better)
Translates to: QTPQRIQGGTLEVEQQAADCLLN*VFSSEI
Trigger: GATCTCAGAGGAGAACACCAAGTTAAGGAGACAGTC...AGCAGCTTGCTGCTCAACCTCTAGTGTCCCTCCCTGGATTCTTTGAGGTGTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389636.9
ENST00000490337.6
CDS-3UTR CAA 90 bp GATTTTCTTGGTTGTGAGTTTTCAGATGTGCACAGTGGTAGCGACAGCAGACACTTCCCGACAGAGCTGTaGGTTGTGTGTCCCTGCCCA +
Preference number: 5 (lower is better)
Translates to: DFLGCEFSDVHSGSDSRHFPTEL*VVCPCP
Trigger: TGGGCAGGGACACACAACCAACAGCTCTGTCGGGAA...GTGTCTGCTGTCGCTACCACTGTGCACATCTGAAAACTCACAACCAAGAAAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471742.5
CDS GCA 90 bp TCTTGCTGTAACAAATCGGGAGGGTTGCTCCATAAAAAGGGGCTCTaGCCAGACTCAGACCAAATCTGCTGCAGCACAACAGTTGGAACT +
Preference number: 5 (lower is better)
Translates to: SCCNKSGGLLHKKGL*PDSDQICCSTTVGT
Trigger: AGTTCCAACTGTTGTGCTGCAGCAGATTTGGTCTGAGTCTGGGCAGAGCCCCTTTTTATGGAGCAACCCTCCCGATTTGTTACAGCAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS GCA 90 bp AAAGATCACTTGCACCAGGCTCTTGCTGTAACAAATCGGGAGGGTTaGTCCATAAAAAGGGGCTCTGCCCAGACTCAGACCAAATCTGCT +
Preference number: 5 (lower is better)
Translates to: KDHLHQALAVTNREG*SIKRGSAQTQTKSA
Trigger: AGCAGATTTGGTCTGAGTCTGGGCAGAGCCCCTTTTTATGGAGCAACCCTCCCGATTTGTTACAGCAAGAGCCTGGTGCAAGTGATCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS-3UTR CAA 90 bp AACACCTTTCTGTACTGGGCACAGGCCGCTATTTTAACCATGCAGCTTCTGTGGGAAGGCAAAGATCACTaGCACCAGGCTCTTGCTGTA +
Preference number: 5 (lower is better)
Translates to: NTFLYWAQAAILTMQLLWEGKDH*HQALAV
Trigger: TACAGCAAGAGCCTGGTGCAAGTGATCTTTGCCTTC...CCACAGAAGCTGCATGGTTAAAATAGCGGCCTGTGCCCAGTACAGAAAGGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS-3UTR CAA 90 bp ACACCTCAGATTTCGAGTGCAACAAGGGTAAGCCCCATTAATCCATGCAAAGAACTATGGAGACTTGCATaGCTTCCCCAGGCAGCGCAC +
Preference number: 5 (lower is better)
Translates to: TPQISSATRVSPINPCKELWRLA*LPQAAH
Trigger: GTGCGCTGCCTGGGGAAGCAATGCAAGTCTCCATAG...TTCTTTGCATGGATTAATGGGGCTTACCCTTGTTGCACTCGAAATCTGAGGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS-3UTR CAA 90 bp AGTGGACATAACATTAGAATCCTAATAGACATTCTGGATAAGTTGTACAAGGCCGCGACCGTGCGGAATTaGGCCCGGGCTGCGTTCACC +
Preference number: 5 (lower is better)
Translates to: SGHNIRILIDILDKLYKAATVRN*ARAAFT
Trigger: GGTGAACGCAGCCCGGGCCAAATTCCGCACGGTCGC...GGCCTTGTACAACTTATCCAGAATGTCTATTAGGATTCTAATGTTATGTCCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS-3UTR CAA 90 bp TCTTTGAGTTACCAAATGCCTGAAGGTAGTACCACACCCCCTGGCCCCCATATTCTCCAGCCTTTCTTCTaGATGATGCTCCCCAGAATC +
Preference number: 5 (lower is better)
Translates to: SLSYQMPEGSTTPPGPHILQPFF*MMLPRI
Trigger: GATTCTGGGGAGCATCATCAAGAAGAAAGGCTGGAG...AATATGGGGGCCAGGGGGTGTGGTACTACCTTCAGGCATTTGGTAACTCAAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR CAA 90 bp TACTGGGCACAGGCCGCTATTTTAACCATGCAGCTTCTGTGGTTCATGCATTGCCTCCAGCCTTTCTTCTaGATGATGCTCCCCAGAATC +
Preference number: 5 (lower is better)
Translates to: YWAQAAILTMQLLWFMHCLQPFF*MMLPRI
Trigger: GATTCTGGGGAGCATCATCAAGAAGAAAGGCTGGAG...GCAATGCATGAACCACAGAAGCTGCATGGTTAAAATAGCGGCCTGTGCCCAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR CAA 90 bp CCTTCTTTGAGTTACCAAATGCCTGAAGGTAGTACCACACCCCCTGGCCCCCATGTACATCGCCATGCCTaGGTTTATCACATGTGTCAT +
Preference number: 5 (lower is better)
Translates to: PSLSYQMPEGSTTPPGPHVHRHA*VYHMCH
Trigger: ATGACACATGTGATAAACCAAGGCATGGCGATGTAC...ATGGGGGCCAGGGGGTGTGGTACTACCTTCAGGCATTTGGTAACTCAAAGAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR CAA 90 bp TACTGGGCACAGGCCGCTATTTTAACCATGCAGCTTCTGTGGTTCATGCATTGCAAGATGGTACTCAGCTaGTTCACAGACCGGTGGGAT +
Preference number: 5 (lower is better)
Translates to: YWAQAAILTMQLLWFMHCKMVLS*FTDRWD
Trigger: ATCCCACCGGTCTGTGAACAAGCTGAGTACCATCTT...GCAATGCATGAACCACAGAAGCTGCATGGTTAAAATAGCGGCCTGTGCCCAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR CAA 90 bp CTGAAGGTAGTACCACACCCCCTGGCCCCCATATTCTTCCCATTGCATAAGCATGTGGAGACCATGTCATaGCGCCAACACCTATTTTGT +
Preference number: 5 (lower is better)
Translates to: LKVVPHPLAPIFFPLHKHVETMS*RQHLFC
Trigger: ACAAAATAGGTGTTGGCGCAATGACATGGTCTCCAC...ATGCTTATGCAATGGGAAGAATATGGGGGCCAGGGGGTGTGGTACTACCTTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR CAA 90 bp CAGCCTTCTTTGAGTTACCAAATGCCTGAAGGTAGTACCACACCCCCTGGCCCCTCTGTACAGCCTTCTTaGAGTTACCAAATGCCTGAA +
Preference number: 5 (lower is better)
Translates to: QPSLSYQMPEGSTTPPGPSVQPS*SYQMPE
Trigger: TTCAGGCATTTGGTAACTCAAAGAAGGCTGTACAGA...GGGGCCAGGGGGTGTGGTACTACCTTCAGGCATTTGGTAACTCAAAGAAGGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR CAA 90 bp CAGACACCTCAAAGAATCCAGGGAGGGACACTAGAGGTTGAGCAGCAAGCTGCTGACATTCTGGATAAGTaGTACAAGGCCATTCTTGGG +
Preference number: 5 (lower is better)
Translates to: QTPQRIQGGTLEVEQQAADILDK*YKAILG
Trigger: CCCAAGAATGGCCTTGTACAACTTATCCAGAATGTC...AGCAGCTTGCTGCTCAACCTCTAGTGTCCCTCCCTGGATTCTTTGAGGTGTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302490.12
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR CAA 90 bp CCTTCTTTGAGTTACCAAATGCCTGAAGGTAGTACCACACCCCCTGGCCCCCATGACATTCTGGATAAGTaGTACAAGGCCATTCTTGGG +
Preference number: 5 (lower is better)
Translates to: PSLSYQMPEGSTTPPGPHDILDK*YKAILG
Trigger: CCCAAGAATGGCCTTGTACAACTTATCCAGAATGTC...ATGGGGGCCAGGGGGTGTGGTACTACCTTCAGGCATTTGGTAACTCAAAGAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000302490.12
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR CAA 90 bp TCTTTGAGTTACCAAATGCCTGAAGGTAGTACCACACCCCCTGGCCCCCATATTTCTTTGGGAGAACAGTaGCCTGAATGGCACCAAGGT +
Preference number: 5 (lower is better)
Translates to: SLSYQMPEGSTTPPGPHISLGEQ*PEWHQG
Trigger: ACCTTGGTGCCATTCAGGCAACTGTTCTCCCAAAGA...AATATGGGGGCCAGGGGGTGTGGTACTACCTTCAGGCATTTGGTAACTCAAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000618897.4
CDS TCA 90 bp GCCATGCCCGTCTCTGCTCTGGTGGTTTCCTGCAACGAAATTCCATaGACACGTAGAAACTTTTCCACATATTTCTGTTCGGCTGCTCCA +
Preference number: 5 (lower is better)
Translates to: AMPVSALVVSCNEIP*TRRNFSTYFCSAAP
Trigger: TGGAGCAGCCGAACAGAAATATGTGGAAAAGTTTCTACGTGTTCATGGAATTTCGTTGCAGGAAACCACCAGAGCAGAGACGGGCATGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471742.5
CDS CCA 90 bp ATCTACATTTTAGAGCCGATTCACTGGATTTTGGCAGACCCAGCTTaGGGCTCGGGATGTCTGCACAGGCAGGTTTATACAGATGCATGT +
Preference number: 5 (lower is better)
Translates to: IYILEPIHWILADPA*GSGCLHRQVYTDAC
Trigger: ACATGCATCTGTATAAACCTGCCTGTGCAGACATCCCGAGCCCCAAGCTGGGTCTGCCAAAATCCAGTGAATCGGCTCTAAAATGTAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471742.5
CDS-3UTR CAA 90 bp CTGGCCCCCATATTCTTCCCATTGCATAAGCATGAGGTGTATACAGCAATGCAACGAGAGGTTGAGCAGTaGCGGGGATTTCTGCTTTTC +
Preference number: 5 (lower is better)
Translates to: LAPIFFPLHKHEVYTAMQREVEQ*RGFLLF
Trigger: GAAAAGCAGAAATCCCCGCAACTGCTCAACCTCTCG...TTGCATTGCTGTATACACCTCATGCTTATGCAATGGGAAGAATATGGGGGCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS-3UTR CAA 90 bp TACCACACCCCCTGGCCCCCATATTCTTCCCATTGCATAAGCATGAGGTGTATATTCCGACTCTTCAAATaGTGCTCTGTGCAGGCTATG +
Preference number: 5 (lower is better)
Translates to: YHTPWPPYSSHCISMRCIFRLFK*CSVQAM
Trigger: CATAGCCTGCACAGAGCACAATTTGAAGAGTCGGAA...TATACACCTCATGCTTATGCAATGGGAAGAATATGGGGGCCAGGGGGTGTGGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS-3UTR CAA 90 bp TGTGTCATGGCTCGGACAATTTCTTCCATGGGAGTGTTACTGTCCGGTCGATTTCTCCAGCCTTTCTTCTaGATGATGCTCCCCAGAATC +
Preference number: 5 (lower is better)
Translates to: CVMARTISSMGVLLSGRFLQPFF*MMLPRI
Trigger: GATTCTGGGGAGCATCATCAAGAAGAAAGGCTGGAG...AAATCGACCGGACAGTAACACTCCCATGGAAGAAATTGTCCGAGCCATGACACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489036.5
CDS-3UTR CAA 90 bp TACTGGGCACAGGCCGCTATTTTAACCATGCAGCTTCTGTGGTTCATGCATTGCGTGGAGACCATGTCATaGCGCCAACACCTATTTTGT +
Preference number: 5 (lower is better)
Translates to: YWAQAAILTMQLLWFMHCVETMS*RQHLFC
Trigger: ACAAAATAGGTGTTGGCGCAATGACATGGTCTCCAC...GCAATGCATGAACCACAGAAGCTGCATGGTTAAAATAGCGGCCTGTGCCCAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR CAA 90 bp AACACCTTTCTGTACTGGGCACAGGCCGCTATTTTAACCATGCAGCTTCTGTGGGTGGAGACCATGTCATaGCGCCAACACCTATTTTGT +
Preference number: 5 (lower is better)
Translates to: NTFLYWAQAAILTMQLLWVETMS*RQHLFC
Trigger: ACAAAATAGGTGTTGGCGCAATGACATGGTCTCCAC...CCACAGAAGCTGCATGGTTAAAATAGCGGCCTGTGCCCAGTACAGAAAGGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR CAA 90 bp GTTGTGAGTTTTCAGATGTGCACAGTGGTAGCGACAGCAGACACCTCAAAGAATCCAGACGCTCCGCAATaGGGGAAAGGTCTTTTAGCT +
Preference number: 5 (lower is better)
Translates to: VVSFQMCTVVATADTSKNPDAPQ*GKGLLA
Trigger: AGCTAAAAGACCTTTCCCCAATTGCGGAGCGTCTGG...ATTCTTTGAGGTGTCTGCTGTCGCTACCACTGTGCACATCTGAAAACTCACAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR CAA 90 bp CAGACACCTCAAAGAATCCAGGGAGGGACACTAGAGGTTGAGCAGCAAGCTGCTCCCATATTCTTCCCATaGCATAAGCATGAGGTGTAT +
Preference number: 5 (lower is better)
Translates to: QTPQRIQGGTLEVEQQAAPIFFP*HKHEVY
Trigger: ATACACCTCATGCTTATGCAATGGGAAGAATATGGG...AGCAGCTTGCTGCTCAACCTCTAGTGTCCCTCCCTGGATTCTTTGAGGTGTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR CAA 90 bp CAGACACCTCAAAGAATCCAGGGAGGGACACTAGAGGTTGAGCAGCAAGCTGCTTCTGTACAGCCTTCTTaGAGTTACCAAATGCCTGAA +
Preference number: 5 (lower is better)
Translates to: QTPQRIQGGTLEVEQQAASVQPS*SYQMPE
Trigger: TTCAGGCATTTGGTAACTCAAAGAAGGCTGTACAGA...AGCAGCTTGCTGCTCAACCTCTAGTGTCCCTCCCTGGATTCTTTGAGGTGTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR CAA 90 bp CCTTCTTTGAGTTACCAAATGCCTGAAGGTAGTACCACACCCCCTGGCCCCCATCTTACGCAACTCACATaGCATCTGTGGATTTTGTTC +
Preference number: 5 (lower is better)
Translates to: PSLSYQMPEGSTTPPGPHLTQLT*HLWILF
Trigger: GAACAAAATCCACAGATGCAATGTGAGTTGCGTAAG...ATGGGGGCCAGGGGGTGTGGTACTACCTTCAGGCATTTGGTAACTCAAAGAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR CAA 90 bp TACCACACCCCCTGGCCCCCATATTCTTCCCATTGCATAAGCATGAGGTGTATATGTACAAGGCCATTCTaGGGGCCAAGCAACAGTAAA +
Preference number: 5 (lower is better)
Translates to: YHTPWPPYSSHCISMRCICTRPF*GPSNSK
Trigger: TTTACTGTTGCTTGGCCCCAAGAATGGCCTTGTACA...TATACACCTCATGCTTATGCAATGGGAAGAATATGGGGGCCAGGGGGTGTGGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000302490.12
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR CAA 90 bp TCTTTGAGTTACCAAATGCCTGAAGGTAGTACCACACCCCCTGGCCCCCATATTTGTACAAGGCCATTCTaGGGGCCAAGCAACAGTAAA +
Preference number: 5 (lower is better)
Translates to: SLSYQMPEGSTTPPGPHICTRPF*GPSNSK
Trigger: TTTACTGTTGCTTGGCCCCAAGAATGGCCTTGTACA...AATATGGGGGCCAGGGGGTGTGGTACTACCTTCAGGCATTTGGTAACTCAAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000302490.12
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR CAA 90 bp TCTTTGAGTTACCAAATGCCTGAAGGTAGTACCACACCCCCTGGCCCCCATATTGACTGTCTCCTTAACTaGGTGTTCTCCTCTGAGATC +
Preference number: 5 (lower is better)
Translates to: SLSYQMPEGSTTPPGPHIDCLLN*VFSSEI
Trigger: GATCTCAGAGGAGAACACCAAGTTAAGGAGACAGTC...AATATGGGGGCCAGGGGGTGTGGTACTACCTTCAGGCATTTGGTAACTCAAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000389636.9
ENST00000490337.6
CDS TCA 90 bp GAGGGAGAATCAGGTTTGCAAATCTTCCCGGGCTGTAATCTCGGCTaGTTAAACAGCCAAATCCATGCAGTGGGGGAGGTTTTTACAGAA +
Preference number: 5 (lower is better)
Translates to: EGESGLQIFPGCNLG*LNSQIHAVGEVFTE
Trigger: TTCTGTAAAAACCTCCCCCACTGCATGGATTTGGCTGTTTAATCAGCCGAGATTACAGCCCGGGAAGATTTGCAAACCTGATTCTCCCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS-3UTR CAA 90 bp GTTGTGAGTTTTCAGATGTGCACAGTGGTAGCGACAGCAGACACCTCAAAGAATGAAGGCAAAGATCACTaGCACCAGGCTCTTGCTGTA +
Preference number: 5 (lower is better)
Translates to: VVSFQMCTVVATADTSKNEGKDH*HQALAV
Trigger: TACAGCAAGAGCCTGGTGCAAGTGATCTTTGCCTTC...ATTCTTTGAGGTGTCTGCTGTCGCTACCACTGTGCACATCTGAAAACTCACAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS-3UTR CAA 90 bp ACACCTCAGATTTCGAGTGCAACAAGGGTAAGCCCCATTAATCCATGCAAAGAAAGGAGCTCTTTGCCTTaGTGTGCGATGGGAAGGCAA +
Preference number: 5 (lower is better)
Translates to: TPQISSATRVSPINPCKERSSLP*CAMGRQ
Trigger: TTGCCTTCCCATCGCACACAAAGGCAAAGAGCTCCT...TTCTTTGCATGGATTAATGGGGCTTACCCTTGTTGCACTCGAAATCTGAGGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS-3UTR CAA 90 bp GTTGTGAGTTTTCAGATGTGCACAGTGGTAGCGACAGCAGACACCTCAAAGAATCTCCAGCCTTTCTTCTaGATGATGCTCCCCAGAATC +
Preference number: 5 (lower is better)
Translates to: VVSFQMCTVVATADTSKNLQPFF*MMLPRI
Trigger: GATTCTGGGGAGCATCATCAAGAAGAAAGGCTGGAG...ATTCTTTGAGGTGTCTGCTGTCGCTACCACTGTGCACATCTGAAAACTCACAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR CAA 90 bp ATCACATTTCCCATTAGACAGCACCTCAGCTCCTCTATACATACAGCAGTTCGCCTCCAGCCTTTCTTCTaGATGATGCTCCCCAGAATC +
Preference number: 5 (lower is better)
Translates to: ITFPIRQHLSSSIHTAVRLQPFF*MMLPRI
Trigger: GATTCTGGGGAGCATCATCAAGAAGAAAGGCTGGAG...GCGAACTGCTGTATGTATAGAGGAGCTGAGGTGCTGTCTAATGGGAAATGTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302490.12
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR CAA 90 bp TACCACACCCCCTGGCCCCCATATTCTTCCCATTGCATAAGCATGAGGTGTATAGTACATCGCCATGCCTaGGTTTATCACATGTGTCAT +
Preference number: 5 (lower is better)
Translates to: YHTPWPPYSSHCISMRCIVHRHA*VYHMCH
Trigger: ATGACACATGTGATAAACCAAGGCATGGCGATGTAC...TATACACCTCATGCTTATGCAATGGGAAGAATATGGGGGCCAGGGGGTGTGGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR CAA 90 bp TACTGGGCACAGGCCGCTATTTTAACCATGCAGCTTCTGTGGTTCATGCATTGCACCGGTGGGATCATATaGAACTGTCTTGCTACAGAA +
Preference number: 5 (lower is better)
Translates to: YWAQAAILTMQLLWFMHCTGGII*NCLATE
Trigger: TTCTGTAGCAAGACAGTTCAATATGATCCCACCGGT...GCAATGCATGAACCACAGAAGCTGCATGGTTAAAATAGCGGCCTGTGCCCAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR CAA 90 bp TCTTTGAGTTACCAAATGCCTGAAGGTAGTACCACACCCCCTGGCCCCCATATTACCGGTGGGATCATATaGAACTGTCTTGCTACAGAA +
Preference number: 5 (lower is better)
Translates to: SLSYQMPEGSTTPPGPHITGGII*NCLATE
Trigger: TTCTGTAGCAAGACAGTTCAATATGATCCCACCGGT...AATATGGGGGCCAGGGGGTGTGGTACTACCTTCAGGCATTTGGTAACTCAAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR CAA 90 bp GTTGTGAGTTTTCAGATGTGCACAGTGGTAGCGACAGCAGACACCTCAAAGAATAAGATGGTACTCAGCTaGTTCACAGACCGGTGGGAT +
Preference number: 5 (lower is better)
Translates to: VVSFQMCTVVATADTSKNKMVLS*FTDRWD
Trigger: ATCCCACCGGTCTGTGAACAAGCTGAGTACCATCTT...ATTCTTTGAGGTGTCTGCTGTCGCTACCACTGTGCACATCTGAAAACTCACAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR CAA 90 bp CAGACACCTCAAAGAATCCAGGGAGGGACACTAGAGGTTGAGCAGCAAGCTGCTTTCTGTGTGGGGAACTaGCTGACCAGAAAATTAAAT +
Preference number: 5 (lower is better)
Translates to: QTPQRIQGGTLEVEQQAAFCVGN*LTRKLN
Trigger: ATTTAATTTTCTGGTCAGCAAGTTCCCCACACAGAA...AGCAGCTTGCTGCTCAACCTCTAGTGTCCCTCCCTGGATTCTTTGAGGTGTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302490.12
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR CAA 90 bp CTGAAGGTAGTACCACACCCCCTGGCCCCCATATTCTTCCCATTGCATAAGCATTTTTCTGAGGCTTTCTaGGGAGATTTGTCTTTCCCT +
Preference number: 5 (lower is better)
Translates to: LKVVPHPLAPIFFPLHKHFSEAF*GDLSFP
Trigger: AGGGAAAGACAAATCTCCCAAGAAAGCCTCAGAAAA...ATGCTTATGCAATGGGAAGAATATGGGGGCCAGGGGGTGTGGTACTACCTTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000389636.9
ENST00000490337.6
CDS TCA 90 bp TCCCAGCCTGAAAATGCAGGTTCTGGATCTCACTTCTGGAGATTATaGTTCAGTAGATCTGGATGGGACCTTAACATTGCCTTGCTGGAC +
Preference number: 5 (lower is better)
Translates to: SQPENAGSGSHFWRL*FSRSGWDLNIALLD
Trigger: GTCCAGCAAGGCAATGTTAAGGTCCCATCCAGATCTACTGAATCATAATCTCCAGAAGTGAGATCCAGAACCTGCATTTTCAGGCTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477912.5
CDS-3UTR CAA 90 bp ACACCTCAGATTTCGAGTGCAACAAGGGTAAGCCCCATTAATCCATGCAAAGAAAACAAATCGGGAGGGTaGCTCCATAAAAAGGGGCTC +
Preference number: 5 (lower is better)
Translates to: TPQISSATRVSPINPCKENKSGG*LHKKGL
Trigger: GAGCCCCTTTTTATGGAGCAACCCTCCCGATTTGTT...TTCTTTGCATGGATTAATGGGGCTTACCCTTGTTGCACTCGAAATCTGAGGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS-3UTR CAA 90 bp CTGGCCCCCATATTCTTCCCATTGCATAAGCATGAGGTGTATACAGCAATGCAAGTGGAGACCATGTCATaGCGCCAACACCTATTTTGT +
Preference number: 5 (lower is better)
Translates to: LAPIFFPLHKHEVYTAMQVETMS*RQHLFC
Trigger: ACAAAATAGGTGTTGGCGCAATGACATGGTCTCCAC...TTGCATTGCTGTATACACCTCATGCTTATGCAATGGGAAGAATATGGGGGCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR CAA 90 bp TCTTTGAGTTACCAAATGCCTGAAGGTAGTACCACACCCCCTGGCCCCCATATTCCCATATTCTTCCCATaGCATAAGCATGAGGTGTAT +
Preference number: 5 (lower is better)
Translates to: SLSYQMPEGSTTPPGPHIPIFFP*HKHEVY
Trigger: ATACACCTCATGCTTATGCAATGGGAAGAATATGGG...AATATGGGGGCCAGGGGGTGTGGTACTACCTTCAGGCATTTGGTAACTCAAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR CAA 90 bp CCTTCTTTGAGTTACCAAATGCCTGAAGGTAGTACCACACCCCCTGGCCCCCATTTCCAAGCAAGACTTTaGAGTGAAGATACTGCTTTT +
Preference number: 5 (lower is better)
Translates to: PSLSYQMPEGSTTPPGPHFQARL*SEDTAF
Trigger: AAAAGCAGTATCTTCACTCAAAAGTCTTGCTTGGAA...ATGGGGGCCAGGGGGTGTGGTACTACCTTCAGGCATTTGGTAACTCAAAGAAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR CAA 90 bp ATCACATTTCCCATTAGACAGCACCTCAGCTCCTCTATACATACAGCAGTTCGCTGTACAAGGCCATTCTaGGGGCCAAGCAACAGTAAA +
Preference number: 5 (lower is better)
Translates to: ITFPIRQHLSSSIHTAVRCTRPF*GPSNSK
Trigger: TTTACTGTTGCTTGGCCCCAAGAATGGCCTTGTACA...GCGAACTGCTGTATGTATAGAGGAGCTGAGGTGCTGTCTAATGGGAAATGTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302490.12
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR CAA 90 bp CTGAAGGTAGTACCACACCCCCTGGCCCCCATATTCTTCCCATTGCATAAGCATTTCTGTGTGGGGAACTaGCTGACCAGAAAATTAAAT +
Preference number: 5 (lower is better)
Translates to: LKVVPHPLAPIFFPLHKHFCVGN*LTRKLN
Trigger: ATTTAATTTTCTGGTCAGCAAGTTCCCCACACAGAA...ATGCTTATGCAATGGGAAGAATATGGGGGCCAGGGGGTGTGGTACTACCTTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000302490.12
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS TCA 90 bp AAATGTCACCCATGTTCCAAGACCCAAGCAAGAAACTCTGAGTCCTaGTTTTCCAAGATTCCCAGCCTGAAAATGCAGGTTCTGGATCTC +
Preference number: 5 (lower is better)
Translates to: KCHPCSKTQARNSES*FSKIPSLKMQVLDL
Trigger: GAGATCCAGAACCTGCATTTTCAGGCTGGGAATCTTGGAAAATCAGGACTCAGAGTTTCTTGCTTGGGTCTTGGAACATGGGTGACATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477912.5
CDS CCA 90 bp TTTCTGTACTGGGCACAGGCCGCTATTTTAACCATGCAGCTTCTGTaGTTCATGCATTGCCTTATGATCTATAGTCCTTCTTGCTGTAGG +
Preference number: 5 (lower is better)
Translates to: FLYWAQAAILTMQLL*FMHCLMIYSPSCCR
Trigger: CCTACAGCAAGAAGGACTATAGATCATAAGGCAATGCATGAACCACAGAAGCTGCATGGTTAAAATAGCGGCCTGTGCCCAGTACAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000497291.5
ENST00000618897.4
CDS CCA 90 bp CTGATTTTCCAAGATTCCTGTATGCCATGCCCGTCTCTGCTCTGGTaGTTTCCTGCAACGAAATTCCATGAACACGTAGAAACTTTTCCA +
Preference number: 5 (lower is better)
Translates to: LIFQDSCMPCPSLLW*FPATKFHEHVETFP
Trigger: TGGAAAAGTTTCTACGTGTTCATGGAATTTCGTTGCAGGAAACCACCAGAGCAGAGACGGGCATGGCATACAGGAATCTTGGAAAATCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471742.5
CDS CCA 90 bp GTCCTGATTTTCCAAGATTCCTGTATGCCATGCCCGTCTCTGCTCTaGTGGTTTCCTGCAACGAAATTCCATGAACACGTAGAAACTTTT +
Preference number: 5 (lower is better)
Translates to: VLIFQDSCMPCPSLL*WFPATKFHEHVETF
Trigger: AAAAGTTTCTACGTGTTCATGGAATTTCGTTGCAGGAAACCACCAGAGCAGAGACGGGCATGGCATACAGGAATCTTGGAAAATCAGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471742.5
CDS-3UTR CAA 90 bp GATTTTCTTGGTTGTGAGTTTTCAGATGTGCACAGTGGTAGCGACAGCAGACACGTACATCGCCATGCCTaGGTTTATCACATGTGTCAT +
Preference number: 5 (lower is better)
Translates to: DFLGCEFSDVHSGSDSRHVHRHA*VYHMCH
Trigger: ATGACACATGTGATAAACCAAGGCATGGCGATGTAC...GTGTCTGCTGTCGCTACCACTGTGCACATCTGAAAACTCACAACCAAGAAAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR CAA 90 bp ATCACATTTCCCATTAGACAGCACCTCAGCTCCTCTATACATACAGCAGTTCGCACCGGTGGGATCATATaGAACTGTCTTGCTACAGAA +
Preference number: 5 (lower is better)
Translates to: ITFPIRQHLSSSIHTAVRTGGII*NCLATE
Trigger: TTCTGTAGCAAGACAGTTCAATATGATCCCACCGGT...GCGAACTGCTGTATGTATAGAGGAGCTGAGGTGCTGTCTAATGGGAAATGTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302490.12
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR CAA 90 bp ACACCTCAGATTTCGAGTGCAACAAGGGTAAGCCCCATTAATCCATGCAAAGAAGTGGAGACCATGTCATaGCGCCAACACCTATTTTGT +
Preference number: 5 (lower is better)
Translates to: TPQISSATRVSPINPCKEVETMS*RQHLFC
Trigger: ACAAAATAGGTGTTGGCGCAATGACATGGTCTCCAC...TTCTTTGCATGGATTAATGGGGCTTACCCTTGTTGCACTCGAAATCTGAGGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302490.12
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR CAA 90 bp CTGGCCCCCATATTCTTCCCATTGCATAAGCATGAGGTGTATACAGCAATGCAAGACATTCTGGATAAGTaGTACAAGGCCATTCTTGGG +
Preference number: 5 (lower is better)
Translates to: LAPIFFPLHKHEVYTAMQDILDK*YKAILG
Trigger: CCCAAGAATGGCCTTGTACAACTTATCCAGAATGTC...TTGCATTGCTGTATACACCTCATGCTTATGCAATGGGAAGAATATGGGGGCCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302490.12
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR CAA 90 bp GATTTTCTTGGTTGTGAGTTTTCAGATGTGCACAGTGGTAGCGACAGCAGACACGACATTCTGGATAAGTaGTACAAGGCCATTCTTGGG +
Preference number: 5 (lower is better)
Translates to: DFLGCEFSDVHSGSDSRHDILDK*YKAILG
Trigger: CCCAAGAATGGCCTTGTACAACTTATCCAGAATGTC...GTGTCTGCTGTCGCTACCACTGTGCACATCTGAAAACTCACAACCAAGAAAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302490.12
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR CAA 90 bp TCTTTGAGTTACCAAATGCCTGAAGGTAGTACCACACCCCCTGGCCCCCATATTTTAAACTTGCAGAAGTaGTGCCTACAAGCAGTTGAA +
Preference number: 5 (lower is better)
Translates to: SLSYQMPEGSTTPPGPHILNLQK*CLQAVE
Trigger: TTCAACTGCTTGTAGGCACAACTTCTGCAAGTTTAA...AATATGGGGGCCAGGGGGTGTGGTACTACCTTCAGGCATTTGGTAACTCAAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000302490.12
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR CAA 90 bp TACCACACCCCCTGGCCCCCATATTCTTCCCATTGCATAAGCATGAGGTGTATATTAAACTTGCAGAAGTaGTGCCTACAAGCAGTTGAA +
Preference number: 5 (lower is better)
Translates to: YHTPWPPYSSHCISMRCILNLQK*CLQAVE
Trigger: TTCAACTGCTTGTAGGCACAACTTCTGCAAGTTTAA...TATACACCTCATGCTTATGCAATGGGAAGAATATGGGGGCCAGGGGGTGTGGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000302490.12
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR CAA 90 bp AACACCTTTCTGTACTGGGCACAGGCCGCTATTTTAACCATGCAGCTTCTGTGGTTCTGTGTGGGGAACTaGCTGACCAGAAAATTAAAT +
Preference number: 5 (lower is better)
Translates to: NTFLYWAQAAILTMQLLWFCVGN*LTRKLN
Trigger: ATTTAATTTTCTGGTCAGCAAGTTCCCCACACAGAA...CCACAGAAGCTGCATGGTTAAAATAGCGGCCTGTGCCCAGTACAGAAAGGTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000302490.12
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR CAA 90 bp GTTGTGAGTTTTCAGATGTGCACAGTGGTAGCGACAGCAGACACCTCAAAGAATCATGTGATGTCATCTTaGGGAGAACAGTTGCCTGAA +
Preference number: 5 (lower is better)
Translates to: VVSFQMCTVVATADTSKNHVMSS*GEQLPE
Trigger: TTCAGGCAACTGTTCTCCCAAAGATGACATCACATG...ATTCTTTGAGGTGTCTGCTGTCGCTACCACTGTGCACATCTGAAAACTCACAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618897.4
CDS TCA 90 bp CCCAAGCAAGAAACTCTGAGTCCTGATTTTCCAAGATTCCCAGCCTaGAAATGCAGGTTCTGGATCTCACTTCTGGAGATTATGATTCAG +
Preference number: 5 (lower is better)
Translates to: PKQETLSPDFPRFPA*KCRFWISLLEIMIQ
Trigger: CTGAATCATAATCTCCAGAAGTGAGATCCAGAACCTGCATTTTCAGGCTGGGAATCTTGGAAAATCAGGACTCAGAGTTTCTTGCTTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477912.5
CDS TCA 90 bp GTAGGGCTTGTTGCGCAGTATGTTATCAATCTCATTTACCACATGTaGTGTCATCTTTGGGAGAACAGTTGCCTGAATGGCACCAAGGTT +
Preference number: 5 (lower is better)
Translates to: VGLVAQYVINLIYHM*CHLWENSCLNGTKV
Trigger: AACCTTGGTGCCATTCAGGCAACTGTTCTCCCAAAGATGACATCACATGTGGTAAATGAGATTGATAACATACTGCGCAACAAGCCCTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618897.4
CDS-3UTR CAA 90 bp AGTTGTACAAGGCCATTCTTGGGGCCAAGCAACAGTAAATATTTGAAAGGTAATCCAGACGCTCCGCAATaGGGGAAAGGTCTTTTAGCT +
Preference number: 5 (lower is better)
Translates to: SCTRPFLGPSNSKYLKGNPDAPQ*GKGLLA
Trigger: AGCTAAAAGACCTTTCCCCAATTGCGGAGCGTCTGG...ATTACCTTTCAAATATTTACTGTTGCTTGGCCCCAAGAATGGCCTTGTACAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000302490.12
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR CAA 90 bp CTGGCCCCCATATTCTTCCCATTGCATAAGCATGAGGTGTATACAGCAATGCAACCCATATTCTTCCCATaGCATAAGCATGAGGTGTAT +
Preference number: 5 (lower is better)
Translates to: LAPIFFPLHKHEVYTAMQPIFFP*HKHEVY
Trigger: ATACACCTCATGCTTATGCAATGGGAAGAATATGGG...TTGCATTGCTGTATACACCTCATGCTTATGCAATGGGAAGAATATGGGGGCCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR CAA 90 bp GATTTTCTTGGTTGTGAGTTTTCAGATGTGCACAGTGGTAGCGACAGCAGACACTCTGTACAGCCTTCTTaGAGTTACCAAATGCCTGAA +
Preference number: 5 (lower is better)
Translates to: DFLGCEFSDVHSGSDSRHSVQPS*SYQMPE
Trigger: TTCAGGCATTTGGTAACTCAAAGAAGGCTGTACAGA...GTGTCTGCTGTCGCTACCACTGTGCACATCTGAAAACTCACAACCAAGAAAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR CAA 90 bp GATTTTCTTGGTTGTGAGTTTTCAGATGTGCACAGTGGTAGCGACAGCAGACACCTTACGCAACTCACATaGCATCTGTGGATTTTGTTC +
Preference number: 5 (lower is better)
Translates to: DFLGCEFSDVHSGSDSRHLTQLT*HLWILF
Trigger: GAACAAAATCCACAGATGCAATGTGAGTTGCGTAAG...GTGTCTGCTGTCGCTACCACTGTGCACATCTGAAAACTCACAACCAAGAAAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR CAA 90 bp TCTTTGAGTTACCAAATGCCTGAAGGTAGTACCACACCCCCTGGCCCCCATATTTTCCAAGCAAGACTTTaGAGTGAAGATACTGCTTTT +
Preference number: 5 (lower is better)
Translates to: SLSYQMPEGSTTPPGPHIFQARL*SEDTAF
Trigger: AAAAGCAGTATCTTCACTCAAAAGTCTTGCTTGGAA...AATATGGGGGCCAGGGGGTGTGGTACTACCTTCAGGCATTTGGTAACTCAAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR CAA 90 bp TACCACACCCCCTGGCCCCCATATTCTTCCCATTGCATAAGCATGAGGTGTATATTCCAAGCAAGACTTTaGAGTGAAGATACTGCTTTT +
Preference number: 5 (lower is better)
Translates to: YHTPWPPYSSHCISMRCIFQARL*SEDTAF
Trigger: AAAAGCAGTATCTTCACTCAAAAGTCTTGCTTGGAA...TATACACCTCATGCTTATGCAATGGGAAGAATATGGGGGCCAGGGGGTGTGGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR CAA 90 bp GATTTTCTTGGTTGTGAGTTTTCAGATGTGCACAGTGGTAGCGACAGCAGACACTTTTCTGAGGCTTTCTaGGGAGATTTGTCTTTCCCT +
Preference number: 5 (lower is better)
Translates to: DFLGCEFSDVHSGSDSRHFSEAF*GDLSFP
Trigger: AGGGAAAGACAAATCTCCCAAGAAAGCCTCAGAAAA...GTGTCTGCTGTCGCTACCACTGTGCACATCTGAAAACTCACAACCAAGAAAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389636.9
ENST00000490337.6
CDS-3UTR CAA 90 bp TACCACACCCCCTGGCCCCCATATTCTTCCCATTGCATAAGCATGAGGTGTATATCACTACTATTTCTGTaGAGTATTCAGTGCAGCTTA +
Preference number: 5 (lower is better)
Translates to: YHTPWPPYSSHCISMRCISLLFL*SIQCSL
Trigger: TAAGCTGCACTGAATACTCAACAGAAATAGTAGTGA...TATACACCTCATGCTTATGCAATGGGAAGAATATGGGGGCCAGGGGGTGTGGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000618897.4
CDS-3UTR CAA 90 bp AGTTGTACAAGGCCATTCTTGGGGCCAAGCAACAGTAAATATTTGAAAGGTAATAAGATGGTACTCAGCTaGTTCACAGACCGGTGGGAT +
Preference number: 5 (lower is better)
Translates to: SCTRPFLGPSNSKYLKGNKMVLS*FTDRWD
Trigger: ATCCCACCGGTCTGTGAACAAGCTGAGTACCATCTT...ATTACCTTTCAAATATTTACTGTTGCTTGGCCCCAAGAATGGCCTTGTACAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302490.12
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR CAA 90 bp CTGGCCCCCATATTCTTCCCATTGCATAAGCATGAGGTGTATACAGCAATGCAATTAAACTTGCAGAAGTaGTGCCTACAAGCAGTTGAA +
Preference number: 5 (lower is better)
Translates to: LAPIFFPLHKHEVYTAMQLNLQK*CLQAVE
Trigger: TTCAACTGCTTGTAGGCACAACTTCTGCAAGTTTAA...TTGCATTGCTGTATACACCTCATGCTTATGCAATGGGAAGAATATGGGGGCCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302490.12
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR CAA 90 bp ATCACATTTCCCATTAGACAGCACCTCAGCTCCTCTATACATACAGCAGTTCGCTTAAACTTGCAGAAGTaGTGCCTACAAGCAGTTGAA +
Preference number: 5 (lower is better)
Translates to: ITFPIRQHLSSSIHTAVRLNLQK*CLQAVE
Trigger: TTCAACTGCTTGTAGGCACAACTTCTGCAAGTTTAA...GCGAACTGCTGTATGTATAGAGGAGCTGAGGTGCTGTCTAATGGGAAATGTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302490.12
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS GCA 90 bp CAGCTTCTGTGGTTCATGCATTGCCTTATGATCTATAGTCCTTCTTaGTGTAGGGCTTGTTGCGCAGTATGTTATCAATCTCATTTACCA +
Preference number: 5 (lower is better)
Translates to: QLLWFMHCLMIYSPS*CRACCAVCYQSHLP
Trigger: TGGTAAATGAGATTGATAACATACTGCGCAACAAGCCCTACAGCAAGAAGGACTATAGATCATAAGGCAATGCATGAACCACAGAAGCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000497291.5
ENST00000618897.4
CDS GCA 90 bp GCAAAGCTAATTGCACGGTGCTTAACTTTAAGACTCACTGTATCTTaGTGTGAATACCTTGGGTTATCTGGCTTCAGTATGTCCCTCAAA +
Preference number: 5 (lower is better)
Translates to: AKLIARCLTLRLTVS*CEYLGLSGFSMSLK
Trigger: TTTGAGGGACATACTGAAGCCAGATAACCCAAGGTATTCACAGCAAGATACAGTGAGTCTTAAAGTTAAGCACCGTGCAATTAGCTTTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471742.5
CDS-3UTR CAA 90 bp AGTTGTACAAGGCCATTCTTGGGGCCAAGCAACAGTAAATATTTGAAAGGTAATTTCCGACTCTTCAAATaGTGCTCTGTGCAGGCTATG +
Preference number: 5 (lower is better)
Translates to: SCTRPFLGPSNSKYLKGNFRLFK*CSVQAM
Trigger: CATAGCCTGCACAGAGCACAATTTGAAGAGTCGGAA...ATTACCTTTCAAATATTTACTGTTGCTTGGCCCCAAGAATGGCCTTGTACAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS-3UTR CAA 90 bp CTGGCCCCCATATTCTTCCCATTGCATAAGCATGAGGTGTATACAGCAATGCAATTCCAAGCAAGACTTTaGAGTGAAGATACTGCTTTT +
Preference number: 5 (lower is better)
Translates to: LAPIFFPLHKHEVYTAMQFQARL*SEDTAF
Trigger: AAAAGCAGTATCTTCACTCAAAAGTCTTGCTTGGAA...TTGCATTGCTGTATACACCTCATGCTTATGCAATGGGAAGAATATGGGGGCCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR CAA 90 bp GTTGTGAGTTTTCAGATGTGCACAGTGGTAGCGACAGCAGACACCTCAAAGAATTTCCAAGCAAGACTTTaGAGTGAAGATACTGCTTTT +
Preference number: 5 (lower is better)
Translates to: VVSFQMCTVVATADTSKNFQARL*SEDTAF
Trigger: AAAAGCAGTATCTTCACTCAAAAGTCTTGCTTGGAA...ATTCTTTGAGGTGTCTGCTGTCGCTACCACTGTGCACATCTGAAAACTCACAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS GCA 90 bp AGATGCATGTTTCAAAAACCCAAGGAAGCAAAGCTAATTGCACGGTaGTTAACTTTAAGACTCACTGTATCTTGCTGTGAATACCTTGGG +
Preference number: 5 (lower is better)
Translates to: RCMFQKPKEAKLIAR*LTLRLTVSCCEYLG
Trigger: CCCAAGGTATTCACAGCAAGATACAGTGAGTCTTAAAGTTAAGCACCGTGCAATTAGCTTTGCTTCCTTGGGTTTTTGAAACATGCATCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000471742.5
CDS-3UTR CAA 90 bp AGTTGTACAAGGCCATTCTTGGGGCCAAGCAACAGTAAATATTTGAAAGGTAATACCGGTGGGATCATATaGAACTGTCTTGCTACAGAA +
Preference number: 5 (lower is better)
Translates to: SCTRPFLGPSNSKYLKGNTGGII*NCLATE
Trigger: TTCTGTAGCAAGACAGTTCAATATGATCCCACCGGT...ATTACCTTTCAAATATTTACTGTTGCTTGGCCCCAAGAATGGCCTTGTACAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302490.12
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR CAA 90 bp AGTGGACATAACATTAGAATCCTAATAGACATTCTGGATAAGTTGTACAAGGCCTGTACAAGGCCATTCTaGGGGCCAAGCAACAGTAAA +
Preference number: 5 (lower is better)
Translates to: SGHNIRILIDILDKLYKACTRPF*GPSNSK
Trigger: TTTACTGTTGCTTGGCCCCAAGAATGGCCTTGTACA...GGCCTTGTACAACTTATCCAGAATGTCTATTAGGATTCTAATGTTATGTCCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302490.12
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS CCA 90 bp CACACAGGAGAGATGCTGACTAAATGTGTTCAGATAAGAAAGCTTTaGGGTATTTATCCCAAAGTCTTCTTGTTTCATCATTCCTTTGCA +
Preference number: 5 (lower is better)
Translates to: HTGEMLTKCVQIRKL*GIYPKVFLFHHSFA
Trigger: TGCAAAGGAATGATGAAACAAGAAGACTTTGGGATAAATACCCCAAAGCTTTCTTATCTGAACACATTTAGTCAGCATCTCTCCTGTGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496923.1
CDS-3UTR CAA 90 bp AGTGGACATAACATTAGAATCCTAATAGACATTCTGGATAAGTTGTACAAGGCCCCCATATTCTTCCCATaGCATAAGCATGAGGTGTAT +
Preference number: 5 (lower is better)
Translates to: SGHNIRILIDILDKLYKAPIFFP*HKHEVY
Trigger: ATACACCTCATGCTTATGCAATGGGAAGAATATGGG...GGCCTTGTACAACTTATCCAGAATGTCTATTAGGATTCTAATGTTATGTCCACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302490.12
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS-3UTR CAA 90 bp AGTGGACATAACATTAGAATCCTAATAGACATTCTGGATAAGTTGTACAAGGCCTTCTGTGTGGGGAACTaGCTGACCAGAAAATTAAAT +
Preference number: 5 (lower is better)
Translates to: SGHNIRILIDILDKLYKAFCVGN*LTRKLN
Trigger: ATTTAATTTTCTGGTCAGCAAGTTCCCCACACAGAA...GGCCTTGTACAACTTATCCAGAATGTCTATTAGGATTCTAATGTTATGTCCACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302490.12
ENST00000471742.5
ENST00000490337.6
ENST00000618897.4
CDS GCA 72 bp CGCAGCCCTTCGCGGAGCCGGTCCGCGGTGTCTGAATaGGGGCTCGCTTCTGGGCGATGGCTCAAATCAGCG +
Preference number: 6 (lower is better)
Translates to: RSPSRSRSAVSE*GLASGRWLKSA
Trigger: CGCTGATTTGAGCCATCGCCCAGAAGCGAGCCCGCATTCAGACACCGCGGACCGGCTCCGCGAAGGGCTGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS CCA 72 bp CGCAGGCTTACCGCAAGATGCGCCGCCAGCATCCCCTaGACCACAGGCAGGATGCTCAACTGGCGCGCGGAG +
Preference number: 6 (lower is better)
Translates to: RRLTARCAASIP*TTGRMLNWRAE
Trigger: CTCCGCGCGCCAGTTGAGCATCCTGCCTGTGGTCCAGGGGATGCTGGCGGCGCATCTTGCGGTAAGCCTGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS CAA 72 bp CCCAGGCTGCGCGCGATGATAGCGACCGTGCGGAATTaGGCCCGGGCTGCGTTCACCACATTGGGGGCGGTG +
Preference number: 6 (lower is better)
Translates to: PRLRAMIATVRN*ARAAFTTLGAV
Trigger: CACCGCCCCCAATGTGGTGAACGCAGCCCGGGCCAAATTCCGCACGGTCGCTATCATCGCGCGCAGCCTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302490.12
ENST00000389634.5
ENST00000489036.5
ENST00000618897.4
CDS CAA 90 bp GTGAACGTCCCCAGGCTGCGCGCGATGATAGCGACCGTGCGGAATTaGGCCCGGGCTGCGTTCACCACATTGGGGGCGGTGGAGCTCTGC +
Preference number: 6 (lower is better)
Translates to: VNVPRLRAMIATVRN*ARAAFTTLGAVELC
Trigger: GCAGAGCTCCACCGCCCCCAATGTGGTGAACGCAGCCCGGGCCAAATTCCGCACGGTCGCTATCATCGCGCGCAGCCTGGGGACGTTCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000302490.12
ENST00000389634.5
ENST00000489036.5
ENST00000618897.4
CDS TCA 72 bp TGCACGCAGCCCTTCGCGGAGCCGGTCCGCGGTGTCTaGATGCGGGCTCGCTTCTGGGCGATGGCTCAAATC +
Preference number: 6 (lower is better)
Translates to: CTQPFAEPVRGV*MRARFWAMAQI
Trigger: GATTTGAGCCATCGCCCAGAAGCGAGCCCGCATTCAGACACCGCGGACCGGCTCCGCGAAGGGCTGCGTGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS GCA 72 bp GATGCGCCGCCAGCATCCCCTGGACCACAGGCAGGATaGTCAACTGGCGCGCGGAGCATCCCAAGAAGCAGC +
Preference number: 6 (lower is better)
Translates to: DAPPASPGPQAG*STGARSIPRSS
Trigger: GCTGCTTCTTGGGATGCTCCGCGCGCCAGTTGAGCATCCTGCCTGTGGTCCAGGGGATGCTGGCGGCGCATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS GCA 72 bp GGCGATGGCTCAAATCAGCGCAGGCTTACCGCAAGATaGGCCGCCAGCATCCCCTGGACCACAGGCAGGATG +
Preference number: 6 (lower is better)
Translates to: GDGSNQRRLTAR*AASIPWTTGRM
Trigger: CATCCTGCCTGTGGTCCAGGGGATGCTGGCGGCGCATCTTGCGGTAAGCCTGCGCTGATTTGAGCCATCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS GCA 72 bp CGCGATGATAGCGACCGTGCGGAATTTGGCCCGGGCTaGGTTCACCACATTGGGGGCGGTGGAGCTCTGCTT +
Preference number: 6 (lower is better)
Translates to: RDDSDRAEFGPG*VHHIGGGGALL
Trigger: AAGCAGAGCTCCACCGCCCCCAATGTGGTGAACGCAGCCCGGGCCAAATTCCGCACGGTCGCTATCATCGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302490.12
ENST00000389634.5
ENST00000489036.5
ENST00000618897.4
CDS CCA 72 bp CCGTGCGGAATTTGGCCCGGGCTGCGTTCACCACATTaGGGGCGGTGGAGCTCTGCTTGCTCAGAAGTCGGT +
Preference number: 6 (lower is better)
Translates to: PCGIWPGLRSPH*GRWSSACSEVG
Trigger: ACCGACTTCTGAGCAAGCAGAGCTCCACCGCCCCCAATGTGGTGAACGCAGCCCGGGCCAAATTCCGCACGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302490.12
ENST00000389634.5
ENST00000489036.5
ENST00000618897.4
CDS CAA 72 bp ACCGTGCGGAATTTGGCCCGGGCTGCGTTCACCACATaGGGGGCGGTGGAGCTCTGCTTGCTCAGAAGTCGG +
Preference number: 6 (lower is better)
Translates to: TVRNLARAAFTT*GAVELCLLRSR
Trigger: CCGACTTCTGAGCAAGCAGAGCTCCACCGCCCCCAATGTGGTGAACGCAGCCCGGGCCAAATTCCGCACGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302490.12
ENST00000389634.5
ENST00000489036.5
ENST00000618897.4
CDS CAA 90 bp GCTCCTCAAGACCCCTCCCCACTCATTCTCGAGCGAAAGCCTGGGTaGCTGAGCCTGCACCGACACGGGTTTGCAGCTGCACGGAGGAGC +
Preference number: 6 (lower is better)
Translates to: APQDPSPLILERKPG*LSLHRHGFAAARRS
Trigger: GCTCCTCCGTGCAGCTGCAAACCCGTGTCGGTGCAGGCTCAGCAACCCAGGCTTTCGCTCGAGAATGAGTGGGGAGGGGTCTTGAGGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS TCA 72 bp CCTCCCCACTCATTCTCGAGCGAAAGCCTGGGTTGCTaGGCCTGCACCGACACGGGTTTGCAGCTGCACGGA +
Preference number: 6 (lower is better)
Translates to: PPHSFSSESLGC*ACTDTGLQLHG
Trigger: TCCGTGCAGCTGCAAACCCGTGTCGGTGCAGGCTCAGCAACCCAGGCTTTCGCTCGAGAATGAGTGGGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS TCA 72 bp CCTTCCTGGGGATGCCGTCAGAGGAGTCCTGGCGGCTaGCTTTCGAGCCAAGCCCACAAAGTGGCACAAGGG +
Preference number: 6 (lower is better)
Translates to: PSWGCRQRSPGG*LSSQAHKVAQG
Trigger: CCCTTGTGCCACTTTGTGGGCTTGGCTCGAAAGTCAGCCGCCAGGACTCCTCTGACGGCATCCCCAGGAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS GCA 72 bp TGGGTTGCTGAGCCTGCACCGACACGGGTTTGCAGCTaGACGGAGGAGCAGGCAGGTCCCTTTAAGGAGCTC +
Preference number: 6 (lower is better)
Translates to: WVAEPAPTRVCS*TEEQAGPFKEL
Trigger: GAGCTCCTTAAAGGGACCTGCCTGCTCCTCCGTGCAGCTGCAAACCCGTGTCGGTGCAGGCTCAGCAACCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS GCA 72 bp CGGGCTGCGTTCACCACATTGGGGGCGGTGGAGCTCTaGTTGCTCAGAAGTCGGTCCTCACCATTCCGACTC +
Preference number: 6 (lower is better)
Translates to: RAAFTTLGAVEL*LLRSRSSPFRL
Trigger: GAGTCGGAATGGTGAGGACCGACTTCTGAGCAAGCAGAGCTCCACCGCCCCCAATGTGGTGAACGCAGCCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302490.12
ENST00000389634.5
ENST00000489036.5
ENST00000618897.4
CDS CCA 72 bp CAAGAAGCAGCTAATCGCAAGCGGGTCCCCTCGGACTaGTGGTCTCCATCCACTCCGGCTGTCAGCTCCCTC +
Preference number: 6 (lower is better)
Translates to: QEAANRKRVPSD*WSPSTPAVSSL
Trigger: GAGGGAGCTGACAGCCGGAGTGGATGGAGACCACCAGTCCGAGGGGACCCGCTTGCGATTAGCTGCTTCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS CCA 72 bp GCCAGCATCCCCTGGACCACAGGCAGGATGCTCAACTaGCGCGCGGAGCATCCCAAGAAGCAGCTAATCGCA +
Preference number: 6 (lower is better)
Translates to: ASIPWTTGRMLN*RAEHPKKQLIA
Trigger: TGCGATTAGCTGCTTCTTGGGATGCTCCGCGCGCCAGTTGAGCATCCTGCCTGTGGTCCAGGGGATGCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS CCA 72 bp TCCGCGGTGTCTGAATGCGGGCTCGCTTCTGGGCGATaGCTCAAATCAGCGCAGGCTTACCGCAAGATGCGC +
Preference number: 6 (lower is better)
Translates to: SAVSECGLASGR*LKSAQAYRKMR
Trigger: GCGCATCTTGCGGTAAGCCTGCGCTGATTTGAGCCATCGCCCAGAAGCGAGCCCGCATTCAGACACCGCGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS CCA 72 bp GTCCTGGCGGCTGACTTTCGAGCCAAGCCCACAAAGTaGCACAAGGGGCTGCGATGCAGGAAAGAGTCCCCG +
Preference number: 6 (lower is better)
Translates to: VLAADFRAKPTK*HKGLRCRKESP
Trigger: CGGGGACTCTTTCCTGCATCGCAGCCCCTTGTGCCACTTTGTGGGCTTGGCTCGAAAGTCAGCCGCCAGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS CAA 72 bp GACCCCTCCCCACTCATTCTCGAGCGAAAGCCTGGGTaGCTGAGCCTGCACCGACACGGGTTTGCAGCTGCA +
Preference number: 6 (lower is better)
Translates to: DPSPLILERKPG*LSLHRHGFAAA
Trigger: TGCAGCTGCAAACCCGTGTCGGTGCAGGCTCAGCAACCCAGGCTTTCGCTCGAGAATGAGTGGGGAGGGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS CAA 90 bp ATGATAGCGACCGTGCGGAATTTGGCCCGGGCTGCGTTCACCACATaGGGGGCGGTGGAGCTCTGCTTGCTCAGAAGTCGGTCCTCACCA +
Preference number: 6 (lower is better)
Translates to: MIATVRNLARAAFTT*GAVELCLLRSRSSP
Trigger: TGGTGAGGACCGACTTCTGAGCAAGCAGAGCTCCACCGCCCCCAATGTGGTGAACGCAGCCCGGGCCAAATTCCGCACGGTCGCTATCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302490.12
ENST00000389634.5
ENST00000489036.5
ENST00000618897.4
CDS GCA 72 bp AAAGCCTGGGTTGCTGAGCCTGCACCGACACGGGTTTaGAGCTGCACGGAGGAGCAGGCAGGTCCCTTTAAG +
Preference number: 6 (lower is better)
Translates to: KAWVAEPAPTRV*SCTEEQAGPFK
Trigger: CTTAAAGGGACCTGCCTGCTCCTCCGTGCAGCTGCAAACCCGTGTCGGTGCAGGCTCAGCAACCCAGGCTTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS GCA 72 bp TTCCTGTGCGGCATGCCTGTGGTGCAGACGGTGGTGTaGTCGCTGGACAGGTCGCAGAGCTTTAGGTACCAG +
Preference number: 6 (lower is better)
Translates to: FLCGMPVVQTVV*SLDRSQSFRYQ
Trigger: CTGGTACCTAAAGCTCTGCGACCTGTCCAGCGAGCACACCACCGTCTGCACCACAGGCATGCCGCACAGGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389636.9
ENST00000490337.6
CDS CCA 72 bp TCAAGACCCCTCCCCACTCATTCTCGAGCGAAAGCCTaGGTTGCTGAGCCTGCACCGACACGGGTTTGCAGC +
Preference number: 6 (lower is better)
Translates to: SRPLPTHSRAKA*VAEPAPTRVCS
Trigger: GCTGCAAACCCGTGTCGGTGCAGGCTCAGCAACCCAGGCTTTCGCTCGAGAATGAGTGGGGAGGGGTCTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS GCA 72 bp TTTTACAGAAGCCTAGAGCTGAGCATTCATGGTGACTaGACGCAGCCCTTCGCGGAGCCGGTCCGCGGTGTC +
Preference number: 6 (lower is better)
Translates to: FYRSLELSIHGD*TQPFAEPVRGV
Trigger: GACACCGCGGACCGGCTCCGCGAAGGGCTGCGTGCAGTCACCATGAATGCTCAGCTCTAGGCTTCTGTAAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS CCA 72 bp GCGGCATGCCTGTGGTGCAGACGGTGGTGTGCTCGCTaGACAGGTCGCAGAGCTTTAGGTACCAGTTCATCT +
Preference number: 6 (lower is better)
Translates to: AACLWCRRWCAR*TGRRALGTSSS
Trigger: AGATGAACTGGTACCTAAAGCTCTGCGACCTGTCCAGCGAGCACACCACCGTCTGCACCACAGGCATGCCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389636.9
ENST00000490337.6
CDS CCA 72 bp CAAGATTCCTGTGCGGCATGCCTGTGGTGCAGACGGTaGTGTGCTCGCTGGACAGGTCGCAGAGCTTTAGGT +
Preference number: 6 (lower is better)
Translates to: QDSCAACLWCRR*CARWTGRRALG
Trigger: ACCTAAAGCTCTGCGACCTGTCCAGCGAGCACACCACCGTCTGCACCACAGGCATGCCGCACAGGAATCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389636.9
ENST00000490337.6
CDS CCA 72 bp GTCCTGATTTTCCAAGATTCCTGTGCGGCATGCCTGTaGTGCAGACGGTGGTGTGCTCGCTGGACAGGTCGC +
Preference number: 6 (lower is better)
Translates to: VLIFQDSCAACL*CRRWCARWTGR
Trigger: GCGACCTGTCCAGCGAGCACACCACCGTCTGCACCACAGGCATGCCGCACAGGAATCTTGGAAAATCAGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389636.9
ENST00000490337.6
CDS CAA 72 bp GCTGCGTTCACCACATTGGGGGCGGTGGAGCTCTGCTaGCTCAGAAGTCGGTCCTCACCATTCCGACTCTTC +
Preference number: 6 (lower is better)
Translates to: AAFTTLGAVELC*LRSRSSPFRLF
Trigger: GAAGAGTCGGAATGGTGAGGACCGACTTCTGAGCAAGCAGAGCTCCACCGCCCCCAATGTGGTGAACGCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302490.12
ENST00000389634.5
ENST00000489036.5
ENST00000618897.4
CDS CAA 90 bp TTGGCCCGGGCTGCGTTCACCACATTGGGGGCGGTGGAGCTCTGCTaGCTCAGAAGTCGGTCCTCACCATTCCGACTCTTCAAATTGTGC +
Preference number: 6 (lower is better)
Translates to: LARAAFTTLGAVELC*LRSRSSPFRLFKLC
Trigger: GCACAATTTGAAGAGTCGGAATGGTGAGGACCGACTTCTGAGCAAGCAGAGCTCCACCGCCCCCAATGTGGTGAACGCAGCCCGGGCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302490.12
ENST00000389634.5
ENST00000489036.5
ENST00000618897.4
CDS GCA 72 bp CTGCGTTCACCACATTGGGGGCGGTGGAGCTCTGCTTaGTCAGAAGTCGGTCCTCACCATTCCGACTCTTCA +
Preference number: 6 (lower is better)
Translates to: LRSPHWGRWSSA*SEVGPHHSDSS
Trigger: TGAAGAGTCGGAATGGTGAGGACCGACTTCTGAGCAAGCAGAGCTCCACCGCCCCCAATGTGGTGAACGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302490.12
ENST00000389634.5
ENST00000489036.5
ENST00000618897.4
CDS GCA 72 bp CTGATTTTCCAAGATTCCTGTGCGGCATGCCTGTGGTaGAGACGGTGGTGTGCTCGCTGGACAGGTCGCAGA +
Preference number: 6 (lower is better)
Translates to: LIFQDSCAACLW*RRWCARWTGRR
Trigger: TCTGCGACCTGTCCAGCGAGCACACCACCGTCTGCACCACAGGCATGCCGCACAGGAATCTTGGAAAATCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389636.9
ENST00000490337.6
CDS GCA 72 bp ATTTCTGTTCGGCTGCTCCACTGGGCCTCACAGGTTTaGAGGCCGCCTGAGGCTGAGTCTTGGTCACTGCTA +
Preference number: 6 (lower is better)
Translates to: ISVRLLHWASQV*RPPEAESWSLL
Trigger: TAGCAGTGACCAAGACTCAGCCTCAGGCGGCCTGCAAACCTGTGAGGCCCAGTGGAGCAGCCGAACAGAAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471742.5
CDS GCA 72 bp CAAATTGTGCTCTGTGCAGGCTATGGAGACTTGCATTaGTTCCCCAGGCAGCGCACGGTCCCTCTCAGAACC +
Preference number: 6 (lower is better)
Translates to: QIVLCAGYGDLH*FPRQRTVPLRT
Trigger: GGTTCTGAGAGGGACCGTGCGCTGCCTGGGGAAGCAATGCAAGTCTCCATAGCCTGCACAGAGCACAATTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS GCA 72 bp AAGGCAGTGAAGAGAGTAGGAAAGACAGCGGTGAATTaGCGATGCCACCCTTCTCCCACCCCACAGCAGCAG +
Preference number: 6 (lower is better)
Translates to: KAVKRVGKTAVN*RCHPSPTPQQQ
Trigger: CTGCTGCTGTGGGGTGGGAGAAGGGTGGCATCGGCAATTCACCGCTGTCTTTCCTACTCTCTTCACTGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475456.5
CDS CAA 90 bp TTTGCAGCTGCACGGAGGAGCAGGCAGGTCCCTTTAAGGAGCTCTTaGCCTTTGTGTGCGATGGGAAGGCAAAGATCACTTGCACCAGGC +
Preference number: 6 (lower is better)
Translates to: FAAARRSRQVPLRSS*PLCAMGRQRSLAPG
Trigger: GCCTGGTGCAAGTGATCTTTGCCTTCCCATCGCACACAAAGGCAAAGAGCTCCTTAAAGGGACCTGCCTGCTCCTCCGTGCAGCTGCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS CAA 90 bp TCCGACTCTTCAAATTGTGCTCTGTGCAGGCTATGGAGACTTGCATaGCTTCCCCAGGCAGCGCACGGTCCCTCTCAGAACCCCAGAACA +
Preference number: 6 (lower is better)
Translates to: SDSSNCALCRLWRLA*LPQAAHGPSQNPRT
Trigger: TGTTCTGGGGTTCTGAGAGGGACCGTGCGCTGCCTGGGGAAGCAATGCAAGTCTCCATAGCCTGCACAGAGCACAATTTGAAGAGTCGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS CAA 90 bp ACCATTCCGACTCTTCAAATTGTGCTCTGTGCAGGCTATGGAGACTaGCATTGCTTCCCCAGGCAGCGCACGGTCCCTCTCAGAACCCCA +
Preference number: 6 (lower is better)
Translates to: TIPTLQIVLCAGYGD*HCFPRQRTVPLRTP
Trigger: TGGGGTTCTGAGAGGGACCGTGCGCTGCCTGGGGAAGCAATGCAAGTCTCCATAGCCTGCACAGAGCACAATTTGAAGAGTCGGAATGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS CAA 90 bp ATCGCTGAAAAAGGCAGTGAAGAGAGTAGGAAAGACAGCGGTGAATaGCCGATGCCACCCTTCTCCCACCCCACAGCAGCAGCTGCATGG +
Preference number: 6 (lower is better)
Translates to: IAEKGSEESRKDSGE*PMPPFSHPTAAAAW
Trigger: CCATGCAGCTGCTGCTGTGGGGTGGGAGAAGGGTGGCATCGGCAATTCACCGCTGTCTTTCCTACTCTCTTCACTGCCTTTTTCAGCGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475456.5
CDS GCA 72 bp CTCTTCAAATTGTGCTCTGTGCAGGCTATGGAGACTTaGATTGCTTCCCCAGGCAGCGCACGGTCCCTCTCA +
Preference number: 6 (lower is better)
Translates to: LFKLCSVQAMET*IASPGSARSLS
Trigger: TGAGAGGGACCGTGCGCTGCCTGGGGAAGCAATGCAAGTCTCCATAGCCTGCACAGAGCACAATTTGAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS CAA 72 bp TCAAATTGTGCTCTGTGCAGGCTATGGAGACTTGCATaGCTTCCCCAGGCAGCGCACGGTCCCTCTCAGAAC +
Preference number: 6 (lower is better)
Translates to: SNCALCRLWRLA*LPQAAHGPSQN
Trigger: GTTCTGAGAGGGACCGTGCGCTGCCTGGGGAAGCAATGCAAGTCTCCATAGCCTGCACAGAGCACAATTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS CAA 72 bp ACTCTTCAAATTGTGCTCTGTGCAGGCTATGGAGACTaGCATTGCTTCCCCAGGCAGCGCACGGTCCCTCTC +
Preference number: 6 (lower is better)
Translates to: TLQIVLCAGYGD*HCFPRQRTVPL
Trigger: GAGAGGGACCGTGCGCTGCCTGGGGAAGCAATGCAAGTCTCCATAGCCTGCACAGAGCACAATTTGAAGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS CAA 72 bp AAAGGCAGTGAAGAGAGTAGGAAAGACAGCGGTGAATaGCCGATGCCACCCTTCTCCCACCCCACAGCAGCA +
Preference number: 6 (lower is better)
Translates to: KGSEESRKDSGE*PMPPFSHPTAA
Trigger: TGCTGCTGTGGGGTGGGAGAAGGGTGGCATCGGCAATTCACCGCTGTCTTTCCTACTCTCTTCACTGCCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475456.5
CDS GCA 72 bp TTGCACCAGGCTCTTGCTGTAACAAATCGGGAGGGTTaGTCCATAAAAAGGGGCTCTGCCCAGACTCAGACC +
Preference number: 6 (lower is better)
Translates to: LHQALAVTNREG*SIKRGSAQTQT
Trigger: GGTCTGAGTCTGGGCAGAGCCCCTTTTTATGGAGCAACCCTCCCGATTTGTTACAGCAAGAGCCTGGTGCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS GCA 72 bp CAGGCAGGTCCCTTTAAGGAGCTCTTTGCCTTTGTGTaGGATGGGAAGGCAAAGATCACTTGCACCAGGCTC +
Preference number: 6 (lower is better)
Translates to: QAGPFKELFAFV*DGKAKITCTRL
Trigger: GAGCCTGGTGCAAGTGATCTTTGCCTTCCCATCGCACACAAAGGCAAAGAGCTCCTTAAAGGGACCTGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS CCA 72 bp GAAGTAAACAGACGGCCCCGAAGTTGTCACAGCAGCTaGAGGGAGAATCAGGTTTGCAAATCTTCCCGGGCT +
Preference number: 6 (lower is better)
Translates to: EVNRRPRSCHSS*RENQVCKSSRA
Trigger: AGCCCGGGAAGATTTGCAAACCTGATTCTCCCTCCAGCTGCTGTGACAACTTCGGGGCCGTCTGTTTACTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS CCA 72 bp CATTCCGACTCTTCAAATTGTGCTCTGTGCAGGCTATaGAGACTTGCATTGCTTCCCCAGGCAGCGCACGGT +
Preference number: 6 (lower is better)
Translates to: HSDSSNCALCRL*RLALLPQAAHG
Trigger: ACCGTGCGCTGCCTGGGGAAGCAATGCAAGTCTCCATAGCCTGCACAGAGCACAATTTGAAGAGTCGGAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS CAA 72 bp CTTGCACCAGGCTCTTGCTGTAACAAATCGGGAGGGTaGCTCCATAAAAAGGGGCTCTGCCCAGACTCAGAC +
Preference number: 6 (lower is better)
Translates to: LAPGSCCNKSGG*LHKKGLCPDSD
Trigger: GTCTGAGTCTGGGCAGAGCCCCTTTTTATGGAGCAACCCTCCCGATTTGTTACAGCAAGAGCCTGGTGCAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS CAA 90 bp CTCTGCTTGCTCAGAAGTCGGTCCTCACCATTCCGACTCTTCAAATaGTGCTCTGTGCAGGCTATGGAGACTTGCATTGCTTCCCCAGGC +
Preference number: 6 (lower is better)
Translates to: LCLLRSRSSPFRLFK*CSVQAMETCIASPG
Trigger: GCCTGGGGAAGCAATGCAAGTCTCCATAGCCTGCACAGAGCACAATTTGAAGAGTCGGAATGGTGAGGACCGACTTCTGAGCAAGCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS GCA 72 bp GGTCCTCACCATTCCGACTCTTCAAATTGTGCTCTGTaGAGGCTATGGAGACTTGCATTGCTTCCCCAGGCA +
Preference number: 6 (lower is better)
Translates to: GPHHSDSSNCAL*RLWRLALLPQA
Trigger: TGCCTGGGGAAGCAATGCAAGTCTCCATAGCCTGCACAGAGCACAATTTGAAGAGTCGGAATGGTGAGGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS CCA 72 bp TTAGAGCCGATTCACTGGATTTTGGCAGACCCAGCTTaGGGCTCGGGATGTCTGCACAGGCAGGTTTATACA +
Preference number: 6 (lower is better)
Translates to: LEPIHWILADPA*GSGCLHRQVYT
Trigger: TGTATAAACCTGCCTGTGCAGACATCCCGAGCCCCAAGCTGGGTCTGCCAAAATCCAGTGAATCGGCTCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471742.5
CDS CAA 90 bp CAAAGATCACTTGCACCAGGCTCTTGCTGTAACAAATCGGGAGGGTaGCTCCATAAAAAGGGGCTCTGCCCAGACTCAGACCAAATCTGC +
Preference number: 6 (lower is better)
Translates to: QRSLAPGSCCNKSGG*LHKKGLCPDSDQIC
Trigger: GCAGATTTGGTCTGAGTCTGGGCAGAGCCCCTTTTTATGGAGCAACCCTCCCGATTTGTTACAGCAAGAGCCTGGTGCAAGTGATCTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS GCA 72 bp AACAAATCGGGAGGGTTGCTCCATAAAAAGGGGCTCTaGCCAGACTCAGACCAAATCTGCTGCAGCACAACA +
Preference number: 6 (lower is better)
Translates to: NKSGGLLHKKGL*PDSDQICCSTT
Trigger: TGTTGTGCTGCAGCAGATTTGGTCTGAGTCTGGGCAGAGCCCCTTTTTATGGAGCAACCCTCCCGATTTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS CAA 72 bp CTTTGCCTTTGTGTGCGATGGGAAGGCAAAGATCACTaGCACCAGGCTCTTGCTGTAACAAATCGGGAGGGT +
Preference number: 6 (lower is better)
Translates to: LCLCVRWEGKDH*HQALAVTNREG
Trigger: ACCCTCCCGATTTGTTACAGCAAGAGCCTGGTGCAAGTGATCTTTGCCTTCCCATCGCACACAAAGGCAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS TCA 72 bp TCAGGTTTGCAAATCTTCCCGGGCTGTAATCTCGGCTaGTTAAACAGCCAAATCCATGCAGTGGGGGAGGTT +
Preference number: 6 (lower is better)
Translates to: SGLQIFPGCNLG*LNSQIHAVGEV
Trigger: AACCTCCCCCACTGCATGGATTTGGCTGTTTAATCAGCCGAGATTACAGCCCGGGAAGATTTGCAAACCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS TCA 72 bp AACTTTCAGGCACCCCGTTTCCGTATTTTCCTGAGATaGTTCCACAGGCAAGTGGAGACCATGTCATTGCGC +
Preference number: 6 (lower is better)
Translates to: NFQAPRFRIFLR*FHRQVETMSLR
Trigger: GCGCAATGACATGGTCTCCACTTGCCTGTGGAATCATCTCAGGAAAATACGGAAACGGGGTGCCTGAAAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000302490.12
ENST00000389634.5
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000497291.5
ENST00000618897.4
CDS TCA 72 bp CCTGGAACTTTCAGGCACCCCGTTTCCGTATTTTCCTaGGATGATTCCACAGGCAAGTGGAGACCATGTCAT +
Preference number: 6 (lower is better)
Translates to: PGTFRHPVSVFS*DDSTGKWRPCH
Trigger: ATGACATGGTCTCCACTTGCCTGTGGAATCATCTCAGGAAAATACGGAAACGGGGTGCCTGAAAGTTCCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000302490.12
ENST00000389634.5
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000497291.5
ENST00000618897.4
CDS TCA 72 bp CCATGTTCCAAGACCCAAGCAAGAAACTCTGAGTCCTaGTTTTCCAAGATTCCTGTGCGGCATGCCTGTGGT +
Preference number: 6 (lower is better)
Translates to: PCSKTQARNSES*FSKIPVRHACG
Trigger: ACCACAGGCATGCCGCACAGGAATCTTGGAAAATCAGGACTCAGAGTTTCTTGCTTGGGTCTTGGAACATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389636.9
ENST00000490337.6
CDS GCA 72 bp GCGATGGGAAGGCAAAGATCACTTGCACCAGGCTCTTaGTGTAACAAATCGGGAGGGTTGCTCCATAAAAAG +
Preference number: 6 (lower is better)
Translates to: AMGRQRSLAPGS*CNKSGGLLHKK
Trigger: CTTTTTATGGAGCAACCCTCCCGATTTGTTACAGCAAGAGCCTGGTGCAAGTGATCTTTGCCTTCCCATCGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS GCA 72 bp AGAAGTCGGTCCTCACCATTCCGACTCTTCAAATTGTaGTCTGTGCAGGCTATGGAGACTTGCATTGCTTCC +
Preference number: 6 (lower is better)
Translates to: RSRSSPFRLFKL*SVQAMETCIAS
Trigger: GGAAGCAATGCAAGTCTCCATAGCCTGCACAGAGCACAATTTGAAGAGTCGGAATGGTGAGGACCGACTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS CAA 72 bp CTCAGAAGTCGGTCCTCACCATTCCGACTCTTCAAATaGTGCTCTGTGCAGGCTATGGAGACTTGCATTGCT +
Preference number: 6 (lower is better)
Translates to: LRSRSSPFRLFK*CSVQAMETCIA
Trigger: AGCAATGCAAGTCTCCATAGCCTGCACAGAGCACAATTTGAAGAGTCGGAATGGTGAGGACCGACTTCTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302490.12
ENST00000618897.4
CDS CAA 90 bp CCTGAGGGACTAAGGCTGCTGTCTTTAGCGTTTTCTGAGGCTTTCTaGGGAGATTTGTCTTTCCCTGCTACAGAAAACCCAGACTGTCTC +
Preference number: 6 (lower is better)
Translates to: PEGLRLLSLAFSEAF*GDLSFPATENPDCL
Trigger: GAGACAGTCTGGGTTTTCTGTAGCAGGGAAAGACAAATCTCCCAAGAAAGCCTCAGAAAACGCTAAAGACAGCAGCCTTAGTCCCTCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389636.9
ENST00000490337.6
CDS TCA 72 bp TCTTTGGGAGAACCTGAATGGCACCAAGGTTTTCAATaGGTTGTTCAGGAGTGGATGATCCCAGGAGCACAG +
Preference number: 6 (lower is better)
Translates to: SLGEPEWHQGFQ*VVQEWMIPGAQ
Trigger: CTGTGCTCCTGGGATCATCCACTCCTGAACAACTCATTGAAAACCTTGGTGCCATTCAGGTTCTCCCAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302490.12
ENST00000389634.5
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000497291.5
CDS TCA 72 bp CCATGTTCCAAGACCCAAGCAAGAAACTCTGAGTCCTaGTTTTCCAAGATTCCTGTATGCCATGCCCGTCTC +
Preference number: 6 (lower is better)
Translates to: PCSKTQARNSES*FSKIPVCHARL
Trigger: GAGACGGGCATGGCATACAGGAATCTTGGAAAATCAGGACTCAGAGTTTCTTGCTTGGGTCTTGGAACATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471742.5
CDS CCA 72 bp TTTCTTTCAACCACTGGTAGCACTTCAGTGAAGCCCTaGAACTTTCAGGCACCCCGTTTCCGTATTTTCCTG +
Preference number: 6 (lower is better)
Translates to: FLSTTGSTSVKP*NFQAPRFRIFL
Trigger: CAGGAAAATACGGAAACGGGGTGCCTGAAAGTTCCAGGGCTTCACTGAAGTGCTACCAGTGGTTGAAAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000302490.12
ENST00000389634.5
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000497291.5
ENST00000618897.4
CDS CCA 72 bp CAAGATTCCTGTATGCCATGCCCGTCTCTGCTCTGGTaGTTTCCTGCAACGAAATTCCATGAACACGTAGAA +
Preference number: 6 (lower is better)
Translates to: QDSCMPCPSLLW*FPATKFHEHVE
Trigger: TTCTACGTGTTCATGGAATTTCGTTGCAGGAAACCACCAGAGCAGAGACGGGCATGGCATACAGGAATCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471742.5
CDS CCA 72 bp TTCCAAGATTCCTGTATGCCATGCCCGTCTCTGCTCTaGTGGTTTCCTGCAACGAAATTCCATGAACACGTA +
Preference number: 6 (lower is better)
Translates to: FQDSCMPCPSLL*WFPATKFHEHV
Trigger: TACGTGTTCATGGAATTTCGTTGCAGGAAACCACCAGAGCAGAGACGGGCATGGCATACAGGAATCTTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471742.5
CDS CCA 72 bp TCCCTTATTACCACTATCTTTGGCTACAGGAGGTGTTaGAAAGGGACGTGTAAGCACAGCCCCTCATGTTTC +
Preference number: 6 (lower is better)
Translates to: SLITTIFGYRRC*KGTCKHSPSCF
Trigger: GAAACATGAGGGGCTGTGCTTACACGTCCCTTTCCAACACCTCCTGTAGCCAAAGATAGTGGTAATAAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496923.1
CDS TCA 72 bp CCATGTTCCAAGACCCAAGCAAGAAACTCTGAGTCCTaGTTTTCCAAGATTCCCAGCCTGAAAATGCAGGTT +
Preference number: 6 (lower is better)
Translates to: PCSKTQARNSES*FSKIPSLKMQV
Trigger: AACCTGCATTTTCAGGCTGGGAATCTTGGAAAATCAGGACTCAGAGTTTCTTGCTTGGGTCTTGGAACATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477912.5
CDS CCA 72 bp AGTACATCGCCATGCCTTGGTTTATCACATGTGTCATaGCTCGGACAATTTCTTCCATGGGAGTGTTACTGT +
Preference number: 6 (lower is better)
Translates to: STSPCLGLSHVS*LGQFLPWECYC
Trigger: ACAGTAACACTCCCATGGAAGAAATTGTCCGAGCCATGACACATGTGATAAACCAAGGCATGGCGATGTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302490.12
ENST00000461717.5
ENST00000471742.5
ENST00000490337.6
ENST00000497291.5
CDS CCA 72 bp TGGGCACAGGCCGCTATTTTAACCATGCAGCTTCTGTaGTTCATGCATTGCCTTATGATCTATAGTCCTTCT +
Preference number: 6 (lower is better)
Translates to: WAQAAILTMQLL*FMHCLMIYSPS
Trigger: AGAAGGACTATAGATCATAAGGCAATGCATGAACCACAGAAGCTGCATGGTTAAAATAGCGGCCTGTGCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000497291.5
ENST00000618897.4
CDS CAA 72 bp CTAAGGCTGCTGTCTTTAGCGTTTTCTGAGGCTTTCTaGGGAGATTTGTCTTTCCCTGCTACAGAAAACCCA +
Preference number: 6 (lower is better)
Translates to: LRLLSLAFSEAF*GDLSFPATENP
Trigger: TGGGTTTTCTGTAGCAGGGAAAGACAAATCTCCCAAGAAAGCCTCAGAAAACGCTAAAGACAGCAGCCTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389636.9
ENST00000490337.6
CDS CAA 72 bp AAATTTAGCTTCCTGGTTTGCAAAATGGGGTTGATTTaGTTCTGGGATCTCCTCCTCCTGCATGAAGCCCAG +
Preference number: 6 (lower is better)
Translates to: KFSFLVCKMGLI*FWDLLLLHEAQ
Trigger: CTGGGCTTCATGCAGGAGGAGGAGATCCCAGAACAAAATCAACCCCATTTTGCAAACCAGGAAGCTAAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476362.5
CDS TCA 72 bp GAAACTCTGAGTCCTGATTTTCCAAGATTCCCAGCCTaGAAATGCAGGTTCTGGATCTCACTTCTGGAGATT +
Preference number: 6 (lower is better)
Translates to: ETLSPDFPRFPA*KCRFWISLLEI
Trigger: AATCTCCAGAAGTGAGATCCAGAACCTGCATTTTCAGGCTGGGAATCTTGGAAAATCAGGACTCAGAGTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477912.5
CDS TCA 72 bp GTCTCTGCTCTGGTGGTTTCCTGCAACGAAATTCCATaGACACGTAGAAACTTTTCCACATATTTCTGTTCG +
Preference number: 6 (lower is better)
Translates to: VSALVVSCNEIP*TRRNFSTYFCS
Trigger: CGAACAGAAATATGTGGAAAAGTTTCTACGTGTTCATGGAATTTCGTTGCAGGAAACCACCAGAGCAGAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471742.5
CDS GCA 72 bp TGGTTCATGCATTGCCTTATGATCTATAGTCCTTCTTaGTGTAGGGCTTGTTGCGCAGTATGTTATCAATCT +
Preference number: 6 (lower is better)
Translates to: WFMHCLMIYSPS*CRACCAVCYQS
Trigger: AGATTGATAACATACTGCGCAACAAGCCCTACAGCAAGAAGGACTATAGATCATAAGGCAATGCATGAACCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302490.12
ENST00000389636.9
ENST00000471742.5
ENST00000490337.6
ENST00000497291.5
ENST00000618897.4
CDS GCA 72 bp ATTGCACGGTGCTTAACTTTAAGACTCACTGTATCTTaGTGTGAATACCTTGGGTTATCTGGCTTCAGTATG +
Preference number: 6 (lower is better)
Translates to: IARCLTLRLTVS*CEYLGLSGFSM
Trigger: CATACTGAAGCCAGATAACCCAAGGTATTCACAGCAAGATACAGTGAGTCTTAAAGTTAAGCACCGTGCAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471742.5
CDS CAA 72 bp TGTTATCAATCTCATTTACCACATGTGATGTCATCTTaGGGAGAACAGTTGCCTGAATGGCACCAAGGTTTT +
Preference number: 6 (lower is better)
Translates to: CYQSHLPHVMSS*GEQLPEWHQGF
Trigger: AAAACCTTGGTGCCATTCAGGCAACTGTTCTCCCAAAGATGACATCACATGTGGTAAATGAGATTGATAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618897.4
CDS GCA 72 bp TTTCAAAAACCCAAGGAAGCAAAGCTAATTGCACGGTaGTTAACTTTAAGACTCACTGTATCTTGCTGTGAA +
Preference number: 6 (lower is better)
Translates to: FQKPKEAKLIAR*LTLRLTVSCCE
Trigger: TTCACAGCAAGATACAGTGAGTCTTAAAGTTAAGCACCGTGCAATTAGCTTTGCTTCCTTGGGTTTTTGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000471742.5
CDS CCA 72 bp GAGATGCTGACTAAATGTGTTCAGATAAGAAAGCTTTaGGGTATTTATCCCAAAGTCTTCTTGTTTCATCAT +
Preference number: 6 (lower is better)
Translates to: EMLTKCVQIRKL*GIYPKVFLFHH
Trigger: ATGATGAAACAAGAAGACTTTGGGATAAATACCCCAAAGCTTTCTTATCTGAACACATTTAGTCAGCATCTC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496923.1