Pregenerated sensors for KBTBD7 (Homo sapiens)
Ensembl gene IDs: ENSG00000120696Ensembl transcript IDs: ENST00000379483.4
Found 43 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | AACCAAGATCCTTCCCAAGAAAACCTTACTGTAAACCAAGACATTCCCACTATTGACTCCTCTGTCCTCTaGCAGGGTATAAGAAAAGTT | + |
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Preference number: 2 (lower is better) Translates to: NQDPSQENLTVNQDIPTIDSSVL*QGIRKV Trigger: AACTTTTCTTATACCCTGGCAGAGGACAGAGGAGTC...AATAGTGGGAATGTCTTGGTTTACAGTAAGGTTTTCTTGGGAAGGATCTTGGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000379483.4 |
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| 3UTR-3UTR CCA 90 bp | AACCAAGATCCTTCCCAAGAAAACCTTACTGTAAACCAAGACATTCCCACTATTTGTAGTCTATATTTGTaGACTTCCCCTTACATATGG | + |
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Preference number: 2 (lower is better) Translates to: NQDPSQENLTVNQDIPTICSLYL*TSPYIW Trigger: CCATATGTAAGGGGAAGTCCACAAATATAGACTACA...AATAGTGGGAATGTCTTGGTTTACAGTAAGGTTTTCTTGGGAAGGATCTTGGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000379483.4 |
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| 3UTR-3UTR CCA 90 bp | AACCAAGATCCTTCCCAAGAAAACCTTACTGTAAACCAAGACATTCCCACTATTTGTAGACTGTTCAAATaGCCAATCAAAATGACTAAG | + |
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Preference number: 2 (lower is better) Translates to: NQDPSQENLTVNQDIPTICRLFK*PIKMTK Trigger: CTTAGTCATTTTGATTGGCCATTTGAACAGTCTACA...AATAGTGGGAATGTCTTGGTTTACAGTAAGGTTTTCTTGGGAAGGATCTTGGTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000379483.4 |
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| CDS-3UTR GCA 90 bp | TTTGAAGGAAAGTACACATCCTTCAAAACCCCGCTAACAATTCCTAGTTCAGTTCGCGGAAGCCCCCACTaGCGCGCTGGCGATCCCGCT | + |
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Preference number: 4 (lower is better) Translates to: FEGKYTSFKTPLTIPSSVRGSPH*RAGDPA Trigger: AGCGGGATCGCCAGCGCGGCAGTGGGGGCTTCCGCG...AACTGAACTAGGAATTGTTAGCGGGGTTTTGAAGGATGTGTACTTTCCTTCAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000379483.4 |
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| CDS-3UTR TCA 90 bp | AACCAAGATCCTTCCCAAGAAAACCTTACTGTAAACCAAGACATTCCCACTATTCACGGGCCGCACTTCTaGATTCAGCCCTATCCCGCG | + |
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Preference number: 4 (lower is better) Translates to: NQDPSQENLTVNQDIPTIHGPHF*IQPYPA Trigger: CGCGGGATAGGGCTGAATTCAGAAGTGCGGCCCGTG...AATAGTGGGAATGTCTTGGTTTACAGTAAGGTTTTCTTGGGAAGGATCTTGGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000379483.4 |
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| CDS-3UTR GCA 90 bp | AACCAAGATCCTTCCCAAGAAAACCTTACTGTAAACCAAGACATTCCCACTATTCGTCCTGGAACAGACTaGGGCACGGGCCGCACTTCT | + |
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Preference number: 4 (lower is better) Translates to: NQDPSQENLTVNQDIPTIRPGTD*GTGRTS Trigger: AGAAGTGCGGCCCGTGCCGCAGTCTGTTCCAGGACG...AATAGTGGGAATGTCTTGGTTTACAGTAAGGTTTTCTTGGGAAGGATCTTGGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000379483.4 |
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| CDS-3UTR CCA 90 bp | TTTGAAGGAAAGTACACATCCTTCAAAACCCCGCTAACAATTCCTAGTTCAGTTAGACAAGCCGCGTCCTaGAACAGACTGCGGCACGGG | + |
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Preference number: 4 (lower is better) Translates to: FEGKYTSFKTPLTIPSSVRQAAS*NRLRHG Trigger: CCCGTGCCGCAGTCTGTTCCAGGACGCGGCTTGTCT...AACTGAACTAGGAATTGTTAGCGGGGTTTTGAAGGATGTGTACTTTCCTTCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000379483.4 |
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| CDS-3UTR CCA 90 bp | TTTGAAGGAAAGTACACATCCTTCAAAACCCCGCTAACAATTCCTAGTTCAGTTCCGAAACCGAGGGCTTaGAAATCCTCTTGGGCCGCC | + |
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Preference number: 4 (lower is better) Translates to: FEGKYTSFKTPLTIPSSVPKPRA*KSSWAA Trigger: GGCGGCCCAAGAGGATTTCCAAGCCCTCGGTTTCGG...AACTGAACTAGGAATTGTTAGCGGGGTTTTGAAGGATGTGTACTTTCCTTCAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000379483.4 |
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| CDS-3UTR TCA 90 bp | TTTGAAGGAAAGTACACATCCTTCAAAACCCCGCTAACAATTCCTAGTTCAGTTAGCCCTATCCCGCGGTaGGGCCTCCCTTTATTGCAT | + |
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Preference number: 4 (lower is better) Translates to: FEGKYTSFKTPLTIPSSVSPIPR*GLPLLH Trigger: ATGCAATAAAGGGAGGCCTCACCGCGGGATAGGGCT...AACTGAACTAGGAATTGTTAGCGGGGTTTTGAAGGATGTGTACTTTCCTTCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000379483.4 |
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| CDS-3UTR GCA 90 bp | TTTGAAGGAAAGTACACATCCTTCAAAACCCCGCTAACAATTCCTAGTTCAGTTCTAGCACGTTGCGATTaGAGGAAAAGAGGCGACCCG | + |
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Preference number: 4 (lower is better) Translates to: FEGKYTSFKTPLTIPSSVLARCD*RKRGDP Trigger: CGGGTCGCCTCTTTTCCTGCAATCGCAACGTGCTAG...AACTGAACTAGGAATTGTTAGCGGGGTTTTGAAGGATGTGTACTTTCCTTCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000379483.4 |
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| CDS-3UTR GCA 90 bp | TTTGAAGGAAAGTACACATCCTTCAAAACCCCGCTAACAATTCCTAGTTCAGTTTGCTACTGCTGCTGCTaGTGTTTGGCACTGGCACCA | + |
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Preference number: 4 (lower is better) Translates to: FEGKYTSFKTPLTIPSSVCYCCC*CLALAP Trigger: TGGTGCCAGTGCCAAACAGCAGCAGCAGCAGTAGCA...AACTGAACTAGGAATTGTTAGCGGGGTTTTGAAGGATGTGTACTTTCCTTCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000379483.4 |
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| CDS-3UTR GCA 90 bp | AACCAAGATCCTTCCCAAGAAAACCTTACTGTAAACCAAGACATTCCCACTATTCAAGAGAGTTGCTGCTaGTACTGCTGCTGCTGCTGT | + |
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Preference number: 4 (lower is better) Translates to: NQDPSQENLTVNQDIPTIQESCC*YCCCCC Trigger: ACAGCAGCAGCAGCAGTAGCAGCAGCAACTCTCTTG...AATAGTGGGAATGTCTTGGTTTACAGTAAGGTTTTCTTGGGAAGGATCTTGGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000379483.4 |
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| CDS-3UTR GCA 90 bp | AACCAAGATCCTTCCCAAGAAAACCTTACTGTAAACCAAGACATTCCCACTATTACCCTGCTGATCCTGTaGATTTCGCTGAGGTGCTAC | + |
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Preference number: 4 (lower is better) Translates to: NQDPSQENLTVNQDIPTITLLIL*ISLRCY Trigger: GTAGCACCTCAGCGAAATGCACAGGATCAGCAGGGT...AATAGTGGGAATGTCTTGGTTTACAGTAAGGTTTTCTTGGGAAGGATCTTGGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000379483.4 |
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| CDS-3UTR CCA 90 bp | TTTGAAGGAAAGTACACATCCTTCAAAACCCCGCTAACAATTCCTAGTTCAGTTCACTGCACAGCTACATaGCATACAGTCCGCTCACTC | + |
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Preference number: 4 (lower is better) Translates to: FEGKYTSFKTPLTIPSSVHCTAT*HTVRSL Trigger: GAGTGAGCGGACTGTATGCCATGTAGCTGTGCAGTG...AACTGAACTAGGAATTGTTAGCGGGGTTTTGAAGGATGTGTACTTTCCTTCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000379483.4 |
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| CDS-3UTR TCA 90 bp | TTTGAAGGAAAGTACACATCCTTCAAAACCCCGCTAACAATTCCTAGTTCAGTTGTGACAGTCTTAGTGTaGGCAAAGCTGGTCAAAGGG | + |
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Preference number: 4 (lower is better) Translates to: FEGKYTSFKTPLTIPSSVVTVLV*AKLVKG Trigger: CCCTTTGACCAGCTTTGCTCACACTAAGACTGTCAC...AACTGAACTAGGAATTGTTAGCGGGGTTTTGAAGGATGTGTACTTTCCTTCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000379483.4 |
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| CDS-3UTR GCA 90 bp | AACCAAGATCCTTCCCAAGAAAACCTTACTGTAAACCAAGACATTCCCACTATTATACAAGAGAGTTGCTaGTGCTACTGCTGCTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: NQDPSQENLTVNQDIPTIIQESC*CYCCCC Trigger: GCAGCAGCAGCAGTAGCAGCAGCAACTCTCTTGTAT...AATAGTGGGAATGTCTTGGTTTACAGTAAGGTTTTCTTGGGAAGGATCTTGGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000379483.4 |
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| CDS-3UTR GCA 90 bp | TTTGAAGGAAAGTACACATCCTTCAAAACCCCGCTAACAATTCCTAGTTCAGTTCAGATACAAGAGAGTTaGTGCTGCTACTGCTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: FEGKYTSFKTPLTIPSSVQIQES*CCYCCC Trigger: GCAGCAGCAGTAGCAGCAGCAACTCTCTTGTATCTG...AACTGAACTAGGAATTGTTAGCGGGGTTTTGAAGGATGTGTACTTTCCTTCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000379483.4 |
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| CDS-3UTR GCA 90 bp | TTTGAAGGAAAGTACACATCCTTCAAAACCCCGCTAACAATTCCTAGTTCAGTTTGCATTTCGCTGAGGTaGTACTTGCACCCAGACTTC | + |
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Preference number: 4 (lower is better) Translates to: FEGKYTSFKTPLTIPSSVCISLR*YLHPDF Trigger: GAAGTCTGGGTGCAAGTAGCACCTCAGCGAAATGCA...AACTGAACTAGGAATTGTTAGCGGGGTTTTGAAGGATGTGTACTTTCCTTCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000379483.4 |
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| CDS-3UTR CCA 90 bp | TTTGAAGGAAAGTACACATCCTTCAAAACCCCGCTAACAATTCCTAGTTCAGTTGCTGGTCAAAGGGGATaGCATTGTGTAAATGTCCCC | + |
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Preference number: 4 (lower is better) Translates to: FEGKYTSFKTPLTIPSSVAGQRG*HCVNVP Trigger: GGGGACATTTACACAATGCCATCCCCTTTGACCAGC...AACTGAACTAGGAATTGTTAGCGGGGTTTTGAAGGATGTGTACTTTCCTTCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000379483.4 |
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| CDS-3UTR GCA 90 bp | TTTGAAGGAAAGTACACATCCTTCAAAACCCCGCTAACAATTCCTAGTTCAGTTGACTCCTCTGTCCTCTaGCAGGGTATAAGAAAAGTT | + |
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Preference number: 4 (lower is better) Translates to: FEGKYTSFKTPLTIPSSVDSSVL*QGIRKV Trigger: AACTTTTCTTATACCCTGGCAGAGGACAGAGGAGTC...AACTGAACTAGGAATTGTTAGCGGGGTTTTGAAGGATGTGTACTTTCCTTCAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000379483.4 |
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| CDS-3UTR TCA 90 bp | AACCAAGATCCTTCCCAAGAAAACCTTACTGTAAACCAAGACATTCCCACTATTACTTTTGGTCATGATTaGCAATCTGGTAGTTGTGGG | + |
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Preference number: 4 (lower is better) Translates to: NQDPSQENLTVNQDIPTITFGHD*QSGSCG Trigger: CCCACAACTACCAGATTGTCAATCATGACCAAAAGT...AATAGTGGGAATGTCTTGGTTTACAGTAAGGTTTTCTTGGGAAGGATCTTGGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000379483.4 |
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| CDS-3UTR TCA 90 bp | TTTGAAGGAAAGTACACATCCTTCAAAACCCCGCTAACAATTCCTAGTTCAGTTCTTTCTGTGAGCTTATaGGGCCATTCTGCACATTAT | + |
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Preference number: 4 (lower is better) Translates to: FEGKYTSFKTPLTIPSSVLSVSL*GHSAHY Trigger: ATAATGTGCAGAATGGCCTCATAAGCTCACAGAAAG...AACTGAACTAGGAATTGTTAGCGGGGTTTTGAAGGATGTGTACTTTCCTTCAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000379483.4 |
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| CDS-3UTR GCA 90 bp | TTTGAAGGAAAGTACACATCCTTCAAAACCCCGCTAACAATTCCTAGTTCAGTTAAGCCAGAGTCAAACTaGAAAAGGCCTAACATGGTA | + |
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Preference number: 4 (lower is better) Translates to: FEGKYTSFKTPLTIPSSVKPESN*KRPNMV Trigger: TACCATGTTAGGCCTTTTGCAGTTTGACTCTGGCTT...AACTGAACTAGGAATTGTTAGCGGGGTTTTGAAGGATGTGTACTTTCCTTCAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000379483.4 |
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| CDS-3UTR GCA 90 bp | AACCAAGATCCTTCCCAAGAAAACCTTACTGTAAACCAAGACATTCCCACTATTACTAGACTCACTCCGTaGATCATCTTCCTCAGTAAT | + |
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Preference number: 4 (lower is better) Translates to: NQDPSQENLTVNQDIPTITRLTP*IIFLSN Trigger: ATTACTGAGGAAGATGATGCACGGAGTGAGTCTAGT...AATAGTGGGAATGTCTTGGTTTACAGTAAGGTTTTCTTGGGAAGGATCTTGGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000379483.4 |
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| CDS-3UTR TCA 90 bp | TTTGAAGGAAAGTACACATCCTTCAAAACCCCGCTAACAATTCCTAGTTCAGTTAGTTCTGAACCACTATaGGTTCAAAGGAATAGAAGG | + |
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Preference number: 4 (lower is better) Translates to: FEGKYTSFKTPLTIPSSVSSEPL*VQRNRR Trigger: CCTTCTATTCCTTTGAACTCATAGTGGTTCAGAACT...AACTGAACTAGGAATTGTTAGCGGGGTTTTGAAGGATGTGTACTTTCCTTCAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000379483.4 |
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| CDS-3UTR TCA 90 bp | TTTGAAGGAAAGTACACATCCTTCAAAACCCCGCTAACAATTCCTAGTTCAGTTAAGACACATGCTTCCTaGAAGTCACTACGTTTAAGA | + |
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Preference number: 4 (lower is better) Translates to: FEGKYTSFKTPLTIPSSVKTHAS*KSLRLR Trigger: TCTTAAACGTAGTGACTTTCAGGAAGCATGTGTCTT...AACTGAACTAGGAATTGTTAGCGGGGTTTTGAAGGATGTGTACTTTCCTTCAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000379483.4 |
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| CDS-3UTR TCA 90 bp | AACCAAGATCCTTCCCAAGAAAACCTTACTGTAAACCAAGACATTCCCACTATTGTAGTTGTGGGTCTCTaGATCCAAAGGAATATTACT | + |
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Preference number: 4 (lower is better) Translates to: NQDPSQENLTVNQDIPTIVVVGL*IQRNIT Trigger: AGTAATATTCCTTTGGATTCAGAGACCCACAACTAC...AATAGTGGGAATGTCTTGGTTTACAGTAAGGTTTTCTTGGGAAGGATCTTGGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000379483.4 |
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| CDS-3UTR TCA 90 bp | TTTGAAGGAAAGTACACATCCTTCAAAACCCCGCTAACAATTCCTAGTTCAGTTCAGGAATTGTTCCTCTaGGTCAGTAAAGCATGTATT | + |
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Preference number: 4 (lower is better) Translates to: FEGKYTSFKTPLTIPSSVQELFL*VSKACI Trigger: AATACATGCTTTACTGACTCAGAGGAACAATTCCTG...AACTGAACTAGGAATTGTTAGCGGGGTTTTGAAGGATGTGTACTTTCCTTCAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000379483.4 |
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| CDS-3UTR CCA 90 bp | TTTGAAGGAAAGTACACATCCTTCAAAACCCCGCTAACAATTCCTAGTTCAGTTTGTAGTCTATATTTGTaGACTTCCCCTTACATATGG | + |
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Preference number: 4 (lower is better) Translates to: FEGKYTSFKTPLTIPSSVCSLYL*TSPYIW Trigger: CCATATGTAAGGGGAAGTCCACAAATATAGACTACA...AACTGAACTAGGAATTGTTAGCGGGGTTTTGAAGGATGTGTACTTTCCTTCAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000379483.4 |
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| CDS-3UTR GCA 90 bp | AACCAAGATCCTTCCCAAGAAAACCTTACTGTAAACCAAGACATTCCCACTATTTGGACAATATTCCAATaGTACACAAAACGGTTCTAT | + |
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Preference number: 4 (lower is better) Translates to: NQDPSQENLTVNQDIPTIWTIFQ*YTKRFY Trigger: ATAGAACCGTTTTGTGTAGCATTGGAATATTGTCCA...AATAGTGGGAATGTCTTGGTTTACAGTAAGGTTTTCTTGGGAAGGATCTTGGTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000379483.4 |
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| CDS-3UTR CAA 90 bp | TTTGAAGGAAAGTACACATCCTTCAAAACCCCGCTAACAATTCCTAGTTCAGTTGCCGAAACCGAGGGCTaGGAAATCCTCTTGGGCCGC | + |
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Preference number: 5 (lower is better) Translates to: FEGKYTSFKTPLTIPSSVAETEG*EILLGR Trigger: GCGGCCCAAGAGGATTTCCAAGCCCTCGGTTTCGGC...AACTGAACTAGGAATTGTTAGCGGGGTTTTGAAGGATGTGTACTTTCCTTCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000379483.4 |
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| CDS-3UTR CAA 90 bp | AACCAAGATCCTTCCCAAGAAAACCTTACTGTAAACCAAGACATTCCCACTATTGCTAGCACGTTGCGATaGCAGGAAAAGAGGCGACCC | + |
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Preference number: 5 (lower is better) Translates to: NQDPSQENLTVNQDIPTIASTLR*QEKRRP Trigger: GGGTCGCCTCTTTTCCTGCAATCGCAACGTGCTAGC...AATAGTGGGAATGTCTTGGTTTACAGTAAGGTTTTCTTGGGAAGGATCTTGGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000379483.4 |
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| CDS-3UTR CAA 90 bp | AACCAAGATCCTTCCCAAGAAAACCTTACTGTAAACCAAGACATTCCCACTATTTGCTGCTGCTGCTGTTaGGCACTGGCACCAGAGACT | + |
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Preference number: 5 (lower is better) Translates to: NQDPSQENLTVNQDIPTICCCCC*ALAPET Trigger: AGTCTCTGGTGCCAGTGCCAAACAGCAGCAGCAGCA...AATAGTGGGAATGTCTTGGTTTACAGTAAGGTTTTCTTGGGAAGGATCTTGGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000379483.4 |
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| CDS-3UTR CAA 90 bp | TTTGAAGGAAAGTACACATCCTTCAAAACCCCGCTAACAATTCCTAGTTCAGTTGCAGCTGCTAGCACGTaGCGATTGCAGGAAAAGAGG | + |
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Preference number: 5 (lower is better) Translates to: FEGKYTSFKTPLTIPSSVAAAST*RLQEKR Trigger: CCTCTTTTCCTGCAATCGCAACGTGCTAGCAGCTGC...AACTGAACTAGGAATTGTTAGCGGGGTTTTGAAGGATGTGTACTTTCCTTCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000379483.4 |
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| CDS-3UTR CAA 90 bp | AACCAAGATCCTTCCCAAGAAAACCTTACTGTAAACCAAGACATTCCCACTATTGCAGATACAAGAGAGTaGCTGCTGCTACTGCTGCTG | + |
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Preference number: 5 (lower is better) Translates to: NQDPSQENLTVNQDIPTIADTRE*LLLLLL Trigger: CAGCAGCAGTAGCAGCAGCAACTCTCTTGTATCTGC...AATAGTGGGAATGTCTTGGTTTACAGTAAGGTTTTCTTGGGAAGGATCTTGGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000379483.4 |
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| CDS-3UTR CAA 90 bp | TTTGAAGGAAAGTACACATCCTTCAAAACCCCGCTAACAATTCCTAGTTCAGTTTCGCTGAGGTGCTACTaGCACCCAGACTTCATCATC | + |
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Preference number: 5 (lower is better) Translates to: FEGKYTSFKTPLTIPSSVSLRCY*HPDFII Trigger: GATGATGAAGTCTGGGTGCAAGTAGCACCTCAGCGA...AACTGAACTAGGAATTGTTAGCGGGGTTTTGAAGGATGTGTACTTTCCTTCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000379483.4 |
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| CDS-3UTR CAA 90 bp | AACCAAGATCCTTCCCAAGAAAACCTTACTGTAAACCAAGACATTCCCACTATTTTGAAGAAACATGTATaGCTAGGTCAGCCATCCTAC | + |
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Preference number: 5 (lower is better) Translates to: NQDPSQENLTVNQDIPTILKKHV*LGQPSY Trigger: GTAGGATGGCTGACCTAGCAATACATGTTTCTTCAA...AATAGTGGGAATGTCTTGGTTTACAGTAAGGTTTTCTTGGGAAGGATCTTGGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000379483.4 |
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| CDS-3UTR CAA 90 bp | AACCAAGATCCTTCCCAAGAAAACCTTACTGTAAACCAAGACATTCCCACTATTGATGAGAAGCAACTTTaGGTCATGATTGACAATCTG | + |
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Preference number: 5 (lower is better) Translates to: NQDPSQENLTVNQDIPTIDEKQL*VMIDNL Trigger: CAGATTGTCAATCATGACCAAAAGTTGCTTCTCATC...AATAGTGGGAATGTCTTGGTTTACAGTAAGGTTTTCTTGGGAAGGATCTTGGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000379483.4 |
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| CDS-3UTR CAA 90 bp | AACCAAGATCCTTCCCAAGAAAACCTTACTGTAAACCAAGACATTCCCACTATTCAATGTAGTCTATATTaGTGGACTTCCCCTTACATA | + |
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Preference number: 5 (lower is better) Translates to: NQDPSQENLTVNQDIPTIQCSLY*WTSPYI Trigger: TATGTAAGGGGAAGTCCACAAATATAGACTACATTG...AATAGTGGGAATGTCTTGGTTTACAGTAAGGTTTTCTTGGGAAGGATCTTGGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000379483.4 |
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| CDS-3UTR CAA 90 bp | AACCAAGATCCTTCCCAAGAAAACCTTACTGTAAACCAAGACATTCCCACTATTGACAAACTGGAGCATTaGTCTTTTATTTACCAGTTG | + |
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Preference number: 5 (lower is better) Translates to: NQDPSQENLTVNQDIPTIDKLEH*SFIYQL Trigger: CAACTGGTAAATAAAAGACAAATGCTCCAGTTTGTC...AATAGTGGGAATGTCTTGGTTTACAGTAAGGTTTTCTTGGGAAGGATCTTGGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000379483.4 |
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| CDS TCA 72 bp | GCGTCCTGGAACAGACTGCGGCACGGGCCGCACTTCTaGATTCAGCCCTATCCCGCGGTGAGGCCTCCCTTT | + |
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Preference number: 6 (lower is better) Translates to: ASWNRLRHGPHF*IQPYPAVRPPF Trigger: AAAGGGAGGCCTCACCGCGGGATAGGGCTGAATTCAGAAGTGCGGCCCGTGCCGCAGTCTGTTCCAGGACGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000379483.4 |
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| CDS GCA 72 bp | TCAAAATACTATTTACAAAGAACCCTGCTGATCCTGTaGATTTCGCTGAGGTGCTACTTGCACCCAGACTTC | + |
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Preference number: 6 (lower is better) Translates to: SKYYLQRTLLIL*ISLRCYLHPDF Trigger: GAAGTCTGGGTGCAAGTAGCACCTCAGCGAAATGCACAGGATCAGCAGGGTTCTTTGTAAATAGTATTTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000379483.4 |
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| CDS CAA 72 bp | CCATTGTGGGGTTGTAGAAGTGATGAGAAGCAACTTTaGGTCATGATTGACAATCTGGTAGTTGTGGGTCTC | + |
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Preference number: 6 (lower is better) Translates to: PLWGCRSDEKQL*VMIDNLVVVGL Trigger: GAGACCCACAACTACCAGATTGTCAATCATGACCAAAAGTTGCTTCTCATCACTTCTACAACCCCACAATGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000379483.4 |
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