Pregenerated sensors for KBTBD6 (Homo sapiens)
Ensembl gene IDs: ENSG00000165572Ensembl transcript IDs: ENST00000379485.2
Found 56 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGCTGCAGCCCCGAACTCCTAGACTCAAGTGATCCTACATTCAAGTaGTCCTCCCAAGTAACTGGGACTCAGACTTGGGCCACCATGCCC | + |
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Preference number: 1 (lower is better) Translates to: SCSPELLDSSDPTFK*SSQVTGTQTWATMP Trigger: GGGCATGGTGGCCCAAGTCTGAGTCCCAGTTACTTGGGAGGATCACTTGAATGTAGGATCACTTGAGTCTAGGAGTTCGGGGCTGCAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000379485.2 |
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| 3UTR-3UTR GCA 90 bp | CTTCAAGAGGTAAGTACTTCTGTTTTAGTGTGTTTAACAATGTCAGTTTCGTGGTCATCCAGGCTGGAGTaGAGTGGCCCAGTCTCGGCT | + |
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Preference number: 2 (lower is better) Translates to: LQEVSTSVLVCLTMSVSWSSRLE*SGPVSA Trigger: AGCCGAGACTGGGCCACTGCACTCCAGCCTGGATGA...CCACGAAACTGACATTGTTAAACACACTAAAACAGAAGTACTTACCTCTTGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000379485.2 |
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| 3UTR-3UTR CCA 90 bp | TCTTCAAGAGGTAAGTACTTCTGTTTTAGTGTGTTTAACAATGTCAGTTTCGTGCAGGCTGGAGTGCAGTaGCCCAGTCTCGGCTCTCTG | + |
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Preference number: 2 (lower is better) Translates to: SSRGKYFCFSVFNNVSFVQAGVQ*PSLGSL Trigger: CAGAGAGCCGAGACTGGGCCACTGCACTCCAGCCTG...CACGAAACTGACATTGTTAAACACACTAAAACAGAAGTACTTACCTCTTGAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000379485.2 |
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| 3UTR-3UTR CCA 90 bp | CTTCAAGAGGTAAGTACTTCTGTTTTAGTGTGTTTAACAATGTCAGTTTCGTGGAGCCTCCTGGGTAGCTaGGATTACAGGCGCATGCCA | + |
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Preference number: 2 (lower is better) Translates to: LQEVSTSVLVCLTMSVSWSLLGS*DYRRMP Trigger: TGGCATGCGCCTGTAATCCCAGCTACCCAGGAGGCT...CCACGAAACTGACATTGTTAAACACACTAAAACAGAAGTACTTACCTCTTGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000379485.2 |
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| 3UTR-3UTR TCA 90 bp | TCTTCAAGAGGTAAGTACTTCTGTTTTAGTGTGTTTAACAATGTCAGTTTCGTGGCTCTCTGCAGCCTCTaGCTCCCGGGTTTCAGCAAT | + |
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Preference number: 2 (lower is better) Translates to: SSRGKYFCFSVFNNVSFVALCSL*LPGFSN Trigger: ATTGCTGAAACCCGGGAGTCAGAGGCTGCAGAGAGC...CACGAAACTGACATTGTTAAACACACTAAAACAGAAGTACTTACCTCTTGAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000379485.2 |
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| 3UTR-3UTR GCA 90 bp | CTTCAAGAGGTAAGTACTTCTGTTTTAGTGTGTTTAACAATGTCAGTTTCGTGGGCTGCAGATGATAGCTaGAGCCCCGAACTCCTAGAC | + |
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Preference number: 2 (lower is better) Translates to: LQEVSTSVLVCLTMSVSWAADDS*SPELLD Trigger: GTCTAGGAGTTCGGGGCTGCAGCTATCATCTGCAGC...CCACGAAACTGACATTGTTAAACACACTAAAACAGAAGTACTTACCTCTTGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000379485.2 |
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| 3UTR-3UTR GCA 90 bp | CTTCAAGAGGTAAGTACTTCTGTTTTAGTGTGTTTAACAATGTCAGTTTCGTGGTTTCAGCAATTCTCCTaGCTCAGCCTCCTGGGTAGC | + |
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Preference number: 2 (lower is better) Translates to: LQEVSTSVLVCLTMSVSWFQQFS*LSLLGS Trigger: GCTACCCAGGAGGCTGAGGCAGGAGAATTGCTGAAA...CCACGAAACTGACATTGTTAAACACACTAAAACAGAAGTACTTACCTCTTGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000379485.2 |
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| 3UTR-3UTR CCA 90 bp | TCTTCAAGAGGTAAGTACTTCTGTTTTAGTGTGTTTAACAATGTCAGTTTCGTGACTGGGACTCAGACTTaGGCCACCATGCCCAGACAT | + |
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Preference number: 2 (lower is better) Translates to: SSRGKYFCFSVFNNVSFVTGTQT*ATMPRH Trigger: ATGTCTGGGCATGGTGGCCCAAGTCTGAGTCCCAGT...CACGAAACTGACATTGTTAAACACACTAAAACAGAAGTACTTACCTCTTGAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000379485.2 |
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| 3UTR-3UTR GCA 90 bp | TCTTCAAGAGGTAAGTACTTCTGTTTTAGTGTGTTTAACAATGTCAGTTTCGTGGGGATCTCGTTCTGTTaGCAAAGCTGGAGTGCTGAG | + |
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Preference number: 2 (lower is better) Translates to: SSRGKYFCFSVFNNVSFVGISFC*QSWSAE Trigger: CTCAGCACTCCAGCTTTGGCAACAGAACGAGATCCC...CACGAAACTGACATTGTTAAACACACTAAAACAGAAGTACTTACCTCTTGAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000379485.2 |
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| 3UTR-3UTR TCA 90 bp | TCTTCAAGAGGTAAGTACTTCTGTTTTAGTGTGTTTAACAATGTCAGTTTCGTGCCAAAGCTGGAGTGCTaGGACATGATCATAGCTGCA | + |
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Preference number: 2 (lower is better) Translates to: SSRGKYFCFSVFNNVSFVPKLEC*DMIIAA Trigger: TGCAGCTATGATCATGTCTCAGCACTCCAGCTTTGG...CACGAAACTGACATTGTTAAACACACTAAAACAGAAGTACTTACCTCTTGAAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000379485.2 |
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| 3UTR-3UTR TCA 90 bp | TCTTCAAGAGGTAAGTACTTCTGTTTTAGTGTGTTTAACAATGTCAGTTTCGTGACTCCTAGACTCAAGTaGTCCTACATTCAAGTGATC | + |
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Preference number: 2 (lower is better) Translates to: SSRGKYFCFSVFNNVSFVTPRLK*SYIQVI Trigger: GATCACTTGAATGTAGGATCACTTGAGTCTAGGAGT...CACGAAACTGACATTGTTAAACACACTAAAACAGAAGTACTTACCTCTTGAAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000379485.2 |
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| 3UTR-3UTR CCA 90 bp | CTTCAAGAGGTAAGTACTTCTGTTTTAGTGTGTTTAACAATGTCAGTTTCGTGGTGTTTTTCTAAGAGATaGGATCTCGTTCTGTTGCCA | + |
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Preference number: 2 (lower is better) Translates to: LQEVSTSVLVCLTMSVSWCFSKR*DLVLLP Trigger: TGGCAACAGAACGAGATCCCATCTCTTAGAAAAACA...CCACGAAACTGACATTGTTAAACACACTAAAACAGAAGTACTTACCTCTTGAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000379485.2 |
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| 3UTR-3UTR TCA 90 bp | CTTCAAGAGGTAAGTACTTCTGTTTTAGTGTGTTTAACAATGTCAGTTTCGTGGCTGTATTATTATAAATaGAGTCACCACTCAGTCACC | + |
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Preference number: 2 (lower is better) Translates to: LQEVSTSVLVCLTMSVSWLYYYK*SHHSVT Trigger: GGTGACTGAGTGGTGACTTCATTTATAATAATACAG...CCACGAAACTGACATTGTTAAACACACTAAAACAGAAGTACTTACCTCTTGAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000379485.2 |
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| 3UTR-3UTR CCA 90 bp | CTTCAAGAGGTAAGTACTTCTGTTTTAGTGTGTTTAACAATGTCAGTTTCGTGGCAAACAGTAGAATCCTaGTTTGTTGTTTTTACTGTC | + |
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Preference number: 2 (lower is better) Translates to: LQEVSTSVLVCLTMSVSWQTVES*FVVFTV Trigger: GACAGTAAAAACAACAAACCAGGATTCTACTGTTTG...CCACGAAACTGACATTGTTAAACACACTAAAACAGAAGTACTTACCTCTTGAAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000379485.2 |
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| 3UTR-3UTR CCA 90 bp | CTTCAAGAGGTAAGTACTTCTGTTTTAGTGTGTTTAACAATGTCAGTTTCGTGGACAAAGACTGGAGCATaGTTTACAGAGAAATACAAA | + |
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Preference number: 2 (lower is better) Translates to: LQEVSTSVLVCLTMSVSWTKTGA*FTEKYK Trigger: TTTGTATTTCTCTGTAAACCATGCTCCAGTCTTTGT...CCACGAAACTGACATTGTTAAACACACTAAAACAGAAGTACTTACCTCTTGAAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000379485.2 |
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| 3UTR TCA 72 bp | CCCGAACTCCTAGACTCAAGTGATCCTACATTCAAGTaGTCCTCCCAAGTAACTGGGACTCAGACTTGGGCC | + |
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Preference number: 3 (lower is better) Translates to: PELLDSSDPTFK*SSQVTGTQTWA Trigger: GGCCCAAGTCTGAGTCCCAGTTACTTGGGAGGATCACTTGAATGTAGGATCACTTGAGTCTAGGAGTTCGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000379485.2 |
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| 3UTR TCA 72 bp | AGATGGGATCTCGTTCTGTTGCCAAAGCTGGAGTGCTaGGACATGATCATAGCTGCAGTGAGCTATGATTAT | + |
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Preference number: 3 (lower is better) Translates to: RWDLVLLPKLEC*DMIIAAVSYDY Trigger: ATAATCATAGCTCACTGCAGCTATGATCATGTCTCAGCACTCCAGCTTTGGCAACAGAACGAGATCCCATCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000379485.2 |
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| 3UTR-3UTR CAA 90 bp | TCTTCAAGAGGTAAGTACTTCTGTTTTAGTGTGTTTAACAATGTCAGTTTCGTGAACTGGGACTCAGACTaGGGCCACCATGCCCAGACA | + |
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Preference number: 3 (lower is better) Translates to: SSRGKYFCFSVFNNVSFVNWDSD*GHHAQT Trigger: TGTCTGGGCATGGTGGCCCAAGTCTGAGTCCCAGTT...CACGAAACTGACATTGTTAAACACACTAAAACAGAAGTACTTACCTCTTGAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000379485.2 |
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| 3UTR-3UTR CAA 90 bp | TCTTCAAGAGGTAAGTACTTCTGTTTTAGTGTGTTTAACAATGTCAGTTTCGTGCTTAGGTTAACCATTTaGGAAGTCTACATTGTTCTG | + |
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Preference number: 3 (lower is better) Translates to: SSRGKYFCFSVFNNVSFVLRLTI*EVYIVL Trigger: CAGAACAATGTAGACTTCCAAAATGGTTAACCTAAG...CACGAAACTGACATTGTTAAACACACTAAAACAGAAGTACTTACCTCTTGAAGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000379485.2 |
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| CDS-3UTR GCA 90 bp | CTTCAAGAGGTAAGTACTTCTGTTTTAGTGTGTTTAACAATGTCAGTTTCGTGGCCAGCACATTGCGGTTaGAGGGGAACAGGCGACCCG | + |
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Preference number: 4 (lower is better) Translates to: LQEVSTSVLVCLTMSVSWPAHCG*RGTGDP Trigger: CGGGTCGCCTGTTCCCCTGCAACCGCAATGTGCTGG...CCACGAAACTGACATTGTTAAACACACTAAAACAGAAGTACTTACCTCTTGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000379485.2 |
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| CDS-3UTR GCA 90 bp | TCTTCAAGAGGTAAGTACTTCTGTTTTAGTGTGTTTAACAATGTCAGTTTCGTGCCGCGGCCAGCACATTaGGGTTGCAGGGGAACAGGC | + |
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Preference number: 4 (lower is better) Translates to: SSRGKYFCFSVFNNVSFVPRPAH*GCRGTG Trigger: GCCTGTTCCCCTGCAACCGCAATGTGCTGGCCGCGG...CACGAAACTGACATTGTTAAACACACTAAAACAGAAGTACTTACCTCTTGAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000379485.2 |
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| CDS-3UTR CCA 90 bp | CTTCAAGAGGTAAGTACTTCTGTTTTAGTGTGTTTAACAATGTCAGTTTCGTGGCAGGCTGGAGTGCAGTaGCCCAGTCTCGGCTCTCTG | + |
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Preference number: 4 (lower is better) Translates to: LQEVSTSVLVCLTMSVSWQAGVQ*PSLGSL Trigger: CAGAGAGCCGAGACTGGGCCACTGCACTCCAGCCTG...CCACGAAACTGACATTGTTAAACACACTAAAACAGAAGTACTTACCTCTTGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000379485.2 |
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| CDS-3UTR GCA 90 bp | CTTCAAGAGGTAAGTACTTCTGTTTTAGTGTGTTTAACAATGTCAGTTTCGTGGCGCAGAAGCCGCTACTaGAGCGTGGGCGACAATGCT | + |
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Preference number: 4 (lower is better) Translates to: LQEVSTSVLVCLTMSVSWRRSRY*SVGDNA Trigger: AGCATTGTCGCCCACGCTGCAGTAGCGGCTTCTGCG...CCACGAAACTGACATTGTTAAACACACTAAAACAGAAGTACTTACCTCTTGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000379485.2 |
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| CDS-3UTR GCA 90 bp | CTTCAAGAGGTAAGTACTTCTGTTTTAGTGTGTTTAACAATGTCAGTTTCGTGGCCTGGGATCGCAGCTTaGGATGGCCAAAGGCATCTG | + |
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Preference number: 4 (lower is better) Translates to: LQEVSTSVLVCLTMSVSWPGIAA*DGQRHL Trigger: CAGATGCCTTTGGCCATCGCAAGCTGCGATCCCAGG...CCACGAAACTGACATTGTTAAACACACTAAAACAGAAGTACTTACCTCTTGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000379485.2 |
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| CDS-3UTR GCA 90 bp | TCTTCAAGAGGTAAGTACTTCTGTTTTAGTGTGTTTAACAATGTCAGTTTCGTGTCATCCAGGCTGGAGTaGAGTGGCCCAGTCTCGGCT | + |
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Preference number: 4 (lower is better) Translates to: SSRGKYFCFSVFNNVSFVSSRLE*SGPVSA Trigger: AGCCGAGACTGGGCCACTGCACTCCAGCCTGGATGA...CACGAAACTGACATTGTTAAACACACTAAAACAGAAGTACTTACCTCTTGAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000379485.2 |
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| CDS-3UTR GCA 90 bp | TCTTCAAGAGGTAAGTACTTCTGTTTTAGTGTGTTTAACAATGTCAGTTTCGTGCTTGAAGTAGGGACATaGCGCGGCCAGCACATTGCG | + |
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Preference number: 4 (lower is better) Translates to: SSRGKYFCFSVFNNVSFVLEVGT*RGQHIA Trigger: CGCAATGTGCTGGCCGCGGCATGTCCCTACTTCAAG...CACGAAACTGACATTGTTAAACACACTAAAACAGAAGTACTTACCTCTTGAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000379485.2 |
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| CDS-3UTR CCA 90 bp | CTTCAAGAGGTAAGTACTTCTGTTTTAGTGTGTTTAACAATGTCAGTTTCGTGGACTGGGACTCAGACTTaGGCCACCATGCCCAGACAT | + |
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Preference number: 4 (lower is better) Translates to: LQEVSTSVLVCLTMSVSWTGTQT*ATMPRH Trigger: ATGTCTGGGCATGGTGGCCCAAGTCTGAGTCCCAGT...CCACGAAACTGACATTGTTAAACACACTAAAACAGAAGTACTTACCTCTTGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000379485.2 |
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| CDS-3UTR TCA 90 bp | CTTCAAGAGGTAAGTACTTCTGTTTTAGTGTGTTTAACAATGTCAGTTTCGTGGCACGAGCCCATTTACTaGATTCAACCCTACCCCGCA | + |
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Preference number: 4 (lower is better) Translates to: LQEVSTSVLVCLTMSVSWHEPIY*IQPYPA Trigger: TGCGGGGTAGGGTTGAATTCAGTAAATGGGCTCGTG...CCACGAAACTGACATTGTTAAACACACTAAAACAGAAGTACTTACCTCTTGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000379485.2 |
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| CDS-3UTR GCA 90 bp | CTTCAAGAGGTAAGTACTTCTGTTTTAGTGTGTTTAACAATGTCAGTTTCGTGGGGGATCTCGTTCTGTTaGCAAAGCTGGAGTGCTGAG | + |
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Preference number: 4 (lower is better) Translates to: LQEVSTSVLVCLTMSVSWGISFC*QSWSAE Trigger: CTCAGCACTCCAGCTTTGGCAACAGAACGAGATCCC...CCACGAAACTGACATTGTTAAACACACTAAAACAGAAGTACTTACCTCTTGAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000379485.2 |
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| CDS-3UTR CCA 90 bp | CTTCAAGAGGTAAGTACTTCTGTTTTAGTGTGTTTAACAATGTCAGTTTCGTGGGATCGCAGCTTGCGATaGCCAAAGGCATCTGCAAAC | + |
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Preference number: 4 (lower is better) Translates to: LQEVSTSVLVCLTMSVSWDRSLR*PKASAN Trigger: GTTTGCAGATGCCTTTGGCCATCGCAAGCTGCGATC...CCACGAAACTGACATTGTTAAACACACTAAAACAGAAGTACTTACCTCTTGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000379485.2 |
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| CDS-3UTR CCA 90 bp | TCTTCAAGAGGTAAGTACTTCTGTTTTAGTGTGTTTAACAATGTCAGTTTCGTGGCTGCTGCTGCTGTTTaGCACTGGCACCAGAGACTT | + |
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Preference number: 4 (lower is better) Translates to: SSRGKYFCFSVFNNVSFVAAAAV*HWHQRL Trigger: AAGTCTCTGGTGCCAGTGCCAAACAGCAGCAGCAGC...CACGAAACTGACATTGTTAAACACACTAAAACAGAAGTACTTACCTCTTGAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000379485.2 |
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| CDS-3UTR TCA 90 bp | CTTCAAGAGGTAAGTACTTCTGTTTTAGTGTGTTTAACAATGTCAGTTTCGTGGCAGACAGGTCAAAGGTaGCGGCACTTTGTAAAGGTC | + |
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Preference number: 4 (lower is better) Translates to: LQEVSTSVLVCLTMSVSWQTGQR*RHFVKV Trigger: GACCTTTACAAAGTGCCGTCACCTTTGACCTGTCTG...CCACGAAACTGACATTGTTAAACACACTAAAACAGAAGTACTTACCTCTTGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000379485.2 |
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| CDS-3UTR TCA 90 bp | CTTCAAGAGGTAAGTACTTCTGTTTTAGTGTGTTTAACAATGTCAGTTTCGTGGAAGACGCAGGCTTCCTaGAAGTCATTGCGCTTCAGA | + |
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Preference number: 4 (lower is better) Translates to: LQEVSTSVLVCLTMSVSWKTQAS*KSLRFR Trigger: TCTGAAGCGCAATGACTTTCAGGAAGCCTGCGTCTT...CCACGAAACTGACATTGTTAAACACACTAAAACAGAAGTACTTACCTCTTGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000379485.2 |
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| CDS-3UTR GCA 90 bp | TCTTCAAGAGGTAAGTACTTCTGTTTTAGTGTGTTTAACAATGTCAGTTTCGTGACATGGCACACTGTCTaGTCACTCTCCACGTCCAGA | + |
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Preference number: 4 (lower is better) Translates to: SSRGKYFCFSVFNNVSFVTWHTV*SLSTSR Trigger: TCTGGACGTGGAGAGTGAGCAGACAGTGTGCCATGT...CACGAAACTGACATTGTTAAACACACTAAAACAGAAGTACTTACCTCTTGAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000379485.2 |
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| CDS-3UTR GCA 90 bp | CTTCAAGAGGTAAGTACTTCTGTTTTAGTGTGTTTAACAATGTCAGTTTCGTGGACCCTGTTGATCCTGTaGATTTCACTGAGGCGCTAC | + |
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Preference number: 4 (lower is better) Translates to: LQEVSTSVLVCLTMSVSWTLLIL*ISLRRY Trigger: GTAGCGCCTCAGTGAAATGCACAGGATCAACAGGGT...CCACGAAACTGACATTGTTAAACACACTAAAACAGAAGTACTTACCTCTTGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000379485.2 |
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| CDS-3UTR GCA 90 bp | TCTTCAAGAGGTAAGTACTTCTGTTTTAGTGTGTTTAACAATGTCAGTTTCGTGTTTCAGCAATTCTCCTaGCTCAGCCTCCTGGGTAGC | + |
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Preference number: 4 (lower is better) Translates to: SSRGKYFCFSVFNNVSFVFQQFS*LSLLGS Trigger: GCTACCCAGGAGGCTGAGGCAGGAGAATTGCTGAAA...CACGAAACTGACATTGTTAAACACACTAAAACAGAAGTACTTACCTCTTGAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000379485.2 |
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| CDS-3UTR TCA 90 bp | CTTCAAGAGGTAAGTACTTCTGTTTTAGTGTGTTTAACAATGTCAGTTTCGTGGAATAGATCTCCTCATTaGAGACGCAGGCTTCCTGAA | + |
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Preference number: 4 (lower is better) Translates to: LQEVSTSVLVCLTMSVSWNRSPH*RRRLPE Trigger: TTCAGGAAGCCTGCGTCTTCAATGAGGAGATCTATT...CCACGAAACTGACATTGTTAAACACACTAAAACAGAAGTACTTACCTCTTGAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000379485.2 |
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| CDS-3UTR TCA 90 bp | CTTCAAGAGGTAAGTACTTCTGTTTTAGTGTGTTTAACAATGTCAGTTTCGTGGACTCCTAGACTCAAGTaGTCCTACATTCAAGTGATC | + |
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Preference number: 4 (lower is better) Translates to: LQEVSTSVLVCLTMSVSWTPRLK*SYIQVI Trigger: GATCACTTGAATGTAGGATCACTTGAGTCTAGGAGT...CCACGAAACTGACATTGTTAAACACACTAAAACAGAAGTACTTACCTCTTGAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000379485.2 |
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| CDS-3UTR GCA 90 bp | CTTCAAGAGGTAAGTACTTCTGTTTTAGTGTGTTTAACAATGTCAGTTTCGTGGCATTTCTCTCCCTTCTaGCAGGGTGTAAGAAATGTT | + |
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Preference number: 4 (lower is better) Translates to: LQEVSTSVLVCLTMSVSWHFSPF*QGVRNV Trigger: AACATTTCTTACACCCTGGCAGAAGGGAGAGAAATG...CCACGAAACTGACATTGTTAAACACACTAAAACAGAAGTACTTACCTCTTGAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000379485.2 |
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| CDS-3UTR GCA 90 bp | CTTCAAGAGGTAAGTACTTCTGTTTTAGTGTGTTTAACAATGTCAGTTTCGTGGGCACTAAAGCACATTTaGCCTTTTGAAGCACATACT | + |
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Preference number: 4 (lower is better) Translates to: LQEVSTSVLVCLTMSVSWALKHI*PFEAHT Trigger: AGTATGTGCTTCAAAAGGGCAAATGTGCTTTAGTGC...CCACGAAACTGACATTGTTAAACACACTAAAACAGAAGTACTTACCTCTTGAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000379485.2 |
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| CDS-3UTR CCA 90 bp | TCTTCAAGAGGTAAGTACTTCTGTTTTAGTGTGTTTAACAATGTCAGTTTCGTGAAAAGGCCGAAACTGTaGGTTTGTGAATCTTCTTGG | + |
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Preference number: 4 (lower is better) Translates to: SSRGKYFCFSVFNNVSFVKRPKL*VCESSW Trigger: CCAAGAAGATTCACAAACCCACAGTTTCGGCCTTTT...CACGAAACTGACATTGTTAAACACACTAAAACAGAAGTACTTACCTCTTGAAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000379485.2 |
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| CDS-3UTR TCA 90 bp | TCTTCAAGAGGTAAGTACTTCTGTTTTAGTGTGTTTAACAATGTCAGTTTCGTGGTAGTTGTTGGTCTCTaGGACCAAGGGAATATTATT | + |
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Preference number: 4 (lower is better) Translates to: SSRGKYFCFSVFNNVSFVVVVGL*DQGNII Trigger: AATAATATTCCCTTGGTCTCAGAGACCAACAACTAC...CACGAAACTGACATTGTTAAACACACTAAAACAGAAGTACTTACCTCTTGAAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000379485.2 |
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| CDS-3UTR GCA 90 bp | CTTCAAGAGGTAAGTACTTCTGTTTTAGTGTGTTTAACAATGTCAGTTTCGTGGAAGTTAGAATCAAACTaGAAGAGGCCTAATGTGGTA | + |
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Preference number: 4 (lower is better) Translates to: LQEVSTSVLVCLTMSVSWKLESN*KRPNVV Trigger: TACCACATTAGGCCTCTTGCAGTTTGATTCTAACTT...CCACGAAACTGACATTGTTAAACACACTAAAACAGAAGTACTTACCTCTTGAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000379485.2 |
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| CDS-3UTR CCA 90 bp | TCTTCAAGAGGTAAGTACTTCTGTTTTAGTGTGTTTAACAATGTCAGTTTCGTGTGTTTTTCTAAGAGATaGGATCTCGTTCTGTTGCCA | + |
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Preference number: 4 (lower is better) Translates to: SSRGKYFCFSVFNNVSFVCFSKR*DLVLLP Trigger: TGGCAACAGAACGAGATCCCATCTCTTAGAAAAACA...CACGAAACTGACATTGTTAAACACACTAAAACAGAAGTACTTACCTCTTGAAGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000379485.2 |
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| CDS-3UTR GCA 90 bp | TCTTCAAGAGGTAAGTACTTCTGTTTTAGTGTGTTTAACAATGTCAGTTTCGTGGGAATATTATTCATTTaGCTCCATTCTGCCCTAACT | + |
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Preference number: 4 (lower is better) Translates to: SSRGKYFCFSVFNNVSFVGILFI*LHSALT Trigger: AGTTAGGGCAGAATGGAGGCAAATGAATAATATTCC...CACGAAACTGACATTGTTAAACACACTAAAACAGAAGTACTTACCTCTTGAAGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000379485.2 |
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| CDS-3UTR CCA 90 bp | TCTTCAAGAGGTAAGTACTTCTGTTTTAGTGTGTTTAACAATGTCAGTTTCGTGAGTGCTAGACTCACTTaGTATTTCTTCTTCTTCAGT | + |
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Preference number: 4 (lower is better) Translates to: SSRGKYFCFSVFNNVSFVSARLT*YFFFFS Trigger: ACTGAAGAAGAAGAAATACCAAGTGAGTCTAGCACT...CACGAAACTGACATTGTTAAACACACTAAAACAGAAGTACTTACCTCTTGAAGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000379485.2 |
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| CDS-3UTR CCA 90 bp | TCTTCAAGAGGTAAGTACTTCTGTTTTAGTGTGTTTAACAATGTCAGTTTCGTGATGAGCAACAATTTTTaGCCATGCTTGATAATTCTG | + |
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Preference number: 4 (lower is better) Translates to: SSRGKYFCFSVFNNVSFVMSNNF*PCLIIL Trigger: CAGAATTATCAAGCATGGCCAAAAATTGTTGCTCAT...CACGAAACTGACATTGTTAAACACACTAAAACAGAAGTACTTACCTCTTGAAGA 34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000379485.2 |
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| CDS-3UTR CCA 90 bp | TCTTCAAGAGGTAAGTACTTCTGTTTTAGTGTGTTTAACAATGTCAGTTTCGTGACAAAGACTGGAGCATaGTTTACAGAGAAATACAAA | + |
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Preference number: 4 (lower is better) Translates to: SSRGKYFCFSVFNNVSFVTKTGA*FTEKYK Trigger: TTTGTATTTCTCTGTAAACCATGCTCCAGTCTTTGT...CACGAAACTGACATTGTTAAACACACTAAAACAGAAGTACTTACCTCTTGAAGA 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000379485.2 |
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| CDS-3UTR CAA 90 bp | CTTCAAGAGGTAAGTACTTCTGTTTTAGTGTGTTTAACAATGTCAGTTTCGTGGGCCAGCACATTGCGGTaGCAGGGGAACAGGCGACCC | + |
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Preference number: 5 (lower is better) Translates to: LQEVSTSVLVCLTMSVSWASTLR*QGNRRP Trigger: GGGTCGCCTGTTCCCCTGCAACCGCAATGTGCTGGC...CCACGAAACTGACATTGTTAAACACACTAAAACAGAAGTACTTACCTCTTGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000379485.2 |
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| CDS-3UTR CAA 90 bp | TCTTCAAGAGGTAAGTACTTCTGTTTTAGTGTGTTTAACAATGTCAGTTTCGTGGCCTGGGATCGCAGCTaGCGATGGCCAAAGGCATCT | + |
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Preference number: 5 (lower is better) Translates to: SSRGKYFCFSVFNNVSFVAWDRS*RWPKAS Trigger: AGATGCCTTTGGCCATCGCAAGCTGCGATCCCAGGC...CACGAAACTGACATTGTTAAACACACTAAAACAGAAGTACTTACCTCTTGAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000379485.2 |
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| CDS-3UTR CAA 90 bp | CTTCAAGAGGTAAGTACTTCTGTTTTAGTGTGTTTAACAATGTCAGTTTCGTGGACCCATGTGGCTGAGTaGCTTGAAGTTCTGAGCTAT | + |
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Preference number: 5 (lower is better) Translates to: LQEVSTSVLVCLTMSVSWTHVAE*LEVLSY Trigger: ATAGCTCAGAACTTCAAGCAACTCAGCCACATGGGT...CCACGAAACTGACATTGTTAAACACACTAAAACAGAAGTACTTACCTCTTGAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000379485.2 |
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| CDS-3UTR CAA 90 bp | TCTTCAAGAGGTAAGTACTTCTGTTTTAGTGTGTTTAACAATGTCAGTTTCGTGAGCACATTTGCCCTTTaGAAGCACATACTAGTATGG | + |
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Preference number: 5 (lower is better) Translates to: SSRGKYFCFSVFNNVSFVSTFAL*KHILVW Trigger: CCATACTAGTATGTGCTTCAAAAGGGCAAATGTGCT...CACGAAACTGACATTGTTAAACACACTAAAACAGAAGTACTTACCTCTTGAAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000379485.2 |
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| CDS-3UTR CAA 90 bp | CTTCAAGAGGTAAGTACTTCTGTTTTAGTGTGTTTAACAATGTCAGTTTCGTGGGATGAGCAACAATTTTaGGCCATGCTTGATAATTCT | + |
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Preference number: 5 (lower is better) Translates to: LQEVSTSVLVCLTMSVSWDEQQF*AMLDNS Trigger: AGAATTATCAAGCATGGCCAAAAATTGTTGCTCATC...CCACGAAACTGACATTGTTAAACACACTAAAACAGAAGTACTTACCTCTTGAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000379485.2 |
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| CDS TCA 72 bp | GCGTCTCCGAAGAGACAGCAGCACGAGCCCATTTACTaGATTCAACCCTACCCCGCAGAACCGCCTCCCGTT | + |
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Preference number: 6 (lower is better) Translates to: ASPKRQQHEPIY*IQPYPAEPPPV Trigger: AACGGGAGGCGGTTCTGCGGGGTAGGGTTGAATTCAGTAAATGGGCTCGTGCTGCTGTCTCTTCGGAGACGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000379485.2 |
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| CDS CAA 72 bp | CCACTGTGGGGTGCGAGAGGTGATGAGCAACAATTTTaGGCCATGCTTGATAATTCTGTAGTTGTTGGTCTC | + |
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Preference number: 6 (lower is better) Translates to: PLWGARGDEQQF*AMLDNSVVVGL Trigger: GAGACCAACAACTACAGAATTATCAAGCATGGCCAAAAATTGTTGCTCATCACCTCTCGCACCCCACAGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000379485.2 |
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| CDS TCA 72 bp | TTGGCCATGCTTGATAATTCTGTAGTTGTTGGTCTCTaGGACCAAGGGAATATTATTCATTTGCCTCCATTC | + |
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Preference number: 6 (lower is better) Translates to: LAMLDNSVVVGL*DQGNIIHLPPF Trigger: GAATGGAGGCAAATGAATAATATTCCCTTGGTCTCAGAGACCAACAACTACAGAATTATCAAGCATGGCCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000379485.2 |
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