RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KBTBD12 (Homo sapiens)

Ensembl gene IDs: ENSG00000187715

Ensembl transcript IDs: ENST00000343941.4, ENST00000405109.5, ENST00000405256.5, ENST00000407609.7, ENST00000476626.5, ENST00000492025.1, ENST00000497045.1

Found 1034 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGCCCACTCCAGGACACTCCCTGCCAGCCCCGGAGTGGACCAGGCTaGAGAACCCCACATCCCTGTCCCGGACAGAGTCAGCCCAGGGCA +
Preference number: 1 (lower is better)
Translates to: SPLQDTPCQPRSGPG*RTPHPCPGQSQPRA
Trigger: TGCCCTGGGCTGACTCTGTCCGGGACAGGGATGTGGGGTTCTGCAGCCTGGTCCACTCCGGGGCTGGCAGGGAGTGTCCTGGAGTGGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR CCA 90 bp GCGAAGAGAAAGGCGGGACCCCCACCCTCCCGAGTTGAGCCTACTTaGGGCCAACCTACGCTGGGTCTCCTGGTCCCTCTCCTTGGTGGC +
Preference number: 1 (lower is better)
Translates to: AKRKAGPPPSRVEPT*GQPTLGLLVPLLGG
Trigger: GCCACCAAGGAGAGGGACCAGGAGACCCAGCGTAGGTTGGCCCCAAGTAGGCTCAACTCGGGAGGGTGGGGGTCCCGCCTTTCTCTTCGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR TCA 90 bp GGGCACAAGTGCGAAGAGAAAGGCGGGACCCCCACCCTCCCGAGTTaGGCCTACTTGGGGCCAACCTACGCTGGGTCTCCTGGTCCCTCT +
Preference number: 1 (lower is better)
Translates to: GHKCEEKGGTPTLPS*AYLGPTYAGSPGPS
Trigger: AGAGGGACCAGGAGACCCAGCGTAGGTTGGCCCCAAGTAGGCTCAACTCGGGAGGGTGGGGGTCCCGCCTTTCTCTTCGCACTTGTGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR TCA 90 bp GCCCCATGCCGGCCACCCAAGAGGTCACCCACATGCCAGGTACTGTaGGTGCACTTGGGGCACAAGTGCGAAGAGAAAGGCGGGACCCCC +
Preference number: 1 (lower is better)
Translates to: APCRPPKRSPTCQVL*VHLGHKCEEKGGTP
Trigger: GGGGGTCCCGCCTTTCTCTTCGCACTTGTGCCCCAAGTGCACTCACAGTACCTGGCATGTGGGTGACCTCTTGGGTGGCCGGCATGGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR GCA 90 bp CAGTGCTGTTCATGGGTCCCCAGCAGAGTGAGACCCTCCCTCTGCTaGTCTCCTGTGGCCCTGTGCCCCTCCTGTGGCCGTCATCACCTC +
Preference number: 1 (lower is better)
Translates to: QCCSWVPSRVRPSLC*SPVALCPSCGRHHL
Trigger: GAGGTGATGACGGCCACAGGAGGGGCACAGGGCCACAGGAGAGCAGCAGAGGGAGGGTCTCACTCTGCTGGGGACCCATGAACAGCACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR GCA 90 bp CATGCCGGCCACCCAAGAGGTCACCCACATGCCAGGTACTGTGAGTaGACTTGGGGCACAAGTGCGAAGAGAAAGGCGGGACCCCCACCC +
Preference number: 1 (lower is better)
Translates to: HAGHPRGHPHARYCE*TWGTSAKRKAGPPP
Trigger: GGGTGGGGGTCCCGCCTTTCTCTTCGCACTTGTGCCCCAAGTGCACTCACAGTACCTGGCATGTGGGTGACCTCTTGGGTGGCCGGCATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR CCA 90 bp GGCCACCCAAGAGGTCACCCACATGCCAGGTACTGTGAGTGCACTTaGGGCACAAGTGCGAAGAGAAAGGCGGGACCCCCACCCTCCCGA +
Preference number: 1 (lower is better)
Translates to: GHPRGHPHARYCECT*GTSAKRKAGPPPSR
Trigger: TCGGGAGGGTGGGGGTCCCGCCTTTCTCTTCGCACTTGTGCCCCAAGTGCACTCACAGTACCTGGCATGTGGGTGACCTCTTGGGTGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR CCA 90 bp AGGTGGAGCAGGTGGAGTGACTATGTGAAGAGGAATGGAGGGAAGTaGAGGCCCTGTGGAGGCCGTCCTCAACCCTGGCCGCCGACAGCC +
Preference number: 1 (lower is better)
Translates to: RWSRWSDYVKRNGGK*RPCGGRPQPWPPTA
Trigger: GGCTGTCGGCGGCCAGGGTTGAGGACGGCCTCCACAGGGCCTCCACTTCCCTCCATTCCTCTTCACATAGTCACTCCACCTGCTCCACCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR CCA 90 bp CCCTCCTGGCTCCAGCAGAGGTCATGCCCCTTCTCGGTCCTCCCTTaGCACTCTCTGGAAAGTTCCACTGGGACACTGCCCAGACCTCGC +
Preference number: 1 (lower is better)
Translates to: PSWLQQRSCPFSVLP*HSLESSTGTLPRPR
Trigger: GCGAGGTCTGGGCAGTGTCCCAGTGGAACTTTCCAGAGAGTGCCAAGGGAGGACCGAGAAGGGGCATGACCTCTGCTGGAGCCAGGAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR GCA 90 bp GGCTGGGAAGTCCCTGAAGGGAGACTCCCCATGCTCCCCACCCAGTaGCCAGCACACACTGCTTCTTCACACACAGGCCACTACGCATGC +
Preference number: 1 (lower is better)
Translates to: GWEVPEGRLPMLPTQ*PAHTASSHTGHYAC
Trigger: GCATGCGTAGTGGCCTGTGTGTGAAGAAGCAGTGTGTGCTGGGCACTGGGTGGGGAGCATGGGGAGTCTCCCTTCAGGGACTTCCCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR CCA 90 bp CCCCACATCCCTGTCCCGGACAGAGTCAGCCCAGGGCAGGATTCTTaGCCACTGTGGTCTGGCTTGAGTGCCTTGGTTGTTAGGGGCTGG +
Preference number: 1 (lower is better)
Translates to: PHIPVPDRVSPGQDS*PLWSGLSALVVRGW
Trigger: CCAGCCCCTAACAACCAAGGCACTCAAGCCAGACCACAGTGGCCAAGAATCCTGCCCTGGGCTGACTCTGTCCGGGACAGGGATGTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR TCA 90 bp CCACTTATCTTGCCTCCCACAGGCGGGCGATGGTCTCACCTAGCGTaGCCCTCAGGTGCCTCTGCTGAGCTGCCACAGGGTCCTGAATGT +
Preference number: 1 (lower is better)
Translates to: PLILPPTGGRWSHLA*PSGASAELPQGPEC
Trigger: ACATTCAGGACCCTGTGGCAGCTCAGCAGAGGCACCTGAGGGTCACGCTAGGTGAGACCATCGCCCGCCTGTGGGAGGCAAGATAAGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR CCA 90 bp GGAGATGCTTCTTCCCCTGTCCTCAGCCAGAGCCTTCTCTGTCCCTaGCTTGGGTGGCTTGGGCGAGTCCTGTTCAGCCAGGACTACCCT +
Preference number: 1 (lower is better)
Translates to: GDASSPVLSQSLLCP*LGWLGRVLFSQDYP
Trigger: AGGGTAGTCCTGGCTGAACAGGACTCGCCCAAGCCACCCAAGCCAGGGACAGAGAAGGCTCTGGCTGAGGACAGGGGAAGAAGCATCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR CCA 90 bp GGCTCCAGTTTTGGCAAGACCTGCCTGTCCTGCCTGGTGGGCAGCTaGAACCTAGGGGCACAGGCTAGCGGTCATCACAATCACACAGCT +
Preference number: 1 (lower is better)
Translates to: GSSFGKTCLSCLVGS*NLGAQASGHHNHTA
Trigger: AGCTGTGTGATTGTGATGACCGCTAGCCTGTGCCCCTAGGTTCCAGCTGCCCACCAGGCAGGACAGGCAGGTCTTGCCAAAACTGGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR CCA 90 bp GACCCCCACCCTCCCGAGTTGAGCCTACTTGGGGCCAACCTACGCTaGGTCTCCTGGTCCCTCTCCTTGGTGGCAGAAATAGGTTTCCAA +
Preference number: 1 (lower is better)
Translates to: DPHPPELSLLGANLR*VSWSLSLVAEIGFQ
Trigger: TTGGAAACCTATTTCTGCCACCAAGGAGAGGGACCAGGAGACCCAGCGTAGGTTGGCCCCAAGTAGGCTCAACTCGGGAGGGTGGGGGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR TCA 90 bp TTTAACTCAGATTCCTGGACGTGCTCGGGGCCCAGGCCCTCTGATTaGGAAACACTGCCCCATGCCGGCCACCCAAGAGGTCACCCACAT +
Preference number: 1 (lower is better)
Translates to: FNSDSWTCSGPRPSD*ETLPHAGHPRGHPH
Trigger: ATGTGGGTGACCTCTTGGGTGGCCGGCATGGGGCAGTGTTTCTCAATCAGAGGGCCTGGGCCCCGAGCACGTCCAGGAATCTGAGTTAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR CCA 90 bp GAAGTGGGTGGCTCCATCTTTATTGCAAAGGCCGGGCCATGGGGTTaGCAGCAGCTGGAGGAGATGCTTCTTCCCCTGTCCTCAGCCAGA +
Preference number: 1 (lower is better)
Translates to: EVGGSIFIAKAGPWG*QQLEEMLLPLSSAR
Trigger: TCTGGCTGAGGACAGGGGAAGAAGCATCTCCTCCAGCTGCTGCCAACCCCATGGCCCGGCCTTTGCAATAAAGATGGAGCCACCCACTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR CCA 90 bp TGGGCTGAAGTGGGTGGCTCCATCTTTATTGCAAAGGCCGGGCCATaGGGTTGGCAGCAGCTGGAGGAGATGCTTCTTCCCCTGTCCTCA +
Preference number: 1 (lower is better)
Translates to: WAEVGGSIFIAKAGP*GWQQLEEMLLPLSS
Trigger: TGAGGACAGGGGAAGAAGCATCTCCTCCAGCTGCTGCCAACCCCATGGCCCGGCCTTTGCAATAAAGATGGAGCCACCCACTTCAGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR CCA 90 bp CCTCCCGAGTTGAGCCTACTTGGGGCCAACCTACGCTGGGTCTCCTaGTCCCTCTCCTTGGTGGCAGAAATAGGTTTCCAACAGGCTCCA +
Preference number: 1 (lower is better)
Translates to: PPELSLLGANLRWVS*SLSLVAEIGFQQAP
Trigger: TGGAGCCTGTTGGAAACCTATTTCTGCCACCAAGGAGAGGGACCAGGAGACCCAGCGTAGGTTGGCCCCAAGTAGGCTCAACTCGGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR CCA 90 bp TCCAGCAGAGGTCATGCCCCTTCTCGGTCCTCCCTTGGCACTCTCTaGAAAGTTCCACTGGGACACTGCCCAGACCTCGCATTAGACAGG +
Preference number: 1 (lower is better)
Translates to: SSRGHAPSRSSLGTL*KVPLGHCPDLALDR
Trigger: CCTGTCTAATGCGAGGTCTGGGCAGTGTCCCAGTGGAACTTTCCAGAGAGTGCCAAGGGAGGACCGAGAAGGGGCATGACCTCTGCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR GCA 90 bp CAGTGCCCAGCACACACTGCTTCTTCACACACAGGCCACTACGCATaGAGTGCACATGACTGGCATGACAGAGATGCTGTGGGCCCTCTC +
Preference number: 1 (lower is better)
Translates to: QCPAHTASSHTGHYA*SAHDWHDRDAVGPL
Trigger: GAGAGGGCCCACAGCATCTCTGTCATGCCAGTCATGTGCACTGCATGCGTAGTGGCCTGTGTGTGAAGAAGCAGTGTGTGCTGGGCACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR TCA 90 bp GCTTTCTGGACTTTTCAAGCAGGTGGAGCAGGTGGAGTGACTATGTaGAGAGGAATGGAGGGAAGTGGAGGCCCTGTGGAGGCCGTCCTC +
Preference number: 1 (lower is better)
Translates to: AFWTFQAGGAGGVTM*RGMEGSGGPVEAVL
Trigger: GAGGACGGCCTCCACAGGGCCTCCACTTCCCTCCATTCCTCTTCACATAGTCACTCCACCTGCTCCACCTGCTTGAAAAGTCCAGAAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR CCA 90 bp GCCACTACGCATGCAGTGCACATGACTGGCATGACAGAGATGCTGTaGGCCCTCTCCGTTCTGAAGGCCTTGTTTGCAGAACAGCAGGAG +
Preference number: 1 (lower is better)
Translates to: ATTHAVHMTGMTEML*ALSVLKALFAEQQE
Trigger: CTCCTGCTGTTCTGCAAACAAGGCCTTCAGAACGGAGAGGGCCCACAGCATCTCTGTCATGCCAGTCATGTGCACTGCATGCGTAGTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR TCA 90 bp GCTGGAACCCAGATCTTGAACCCAAAACATCTAGGAGATGTGCCATaGCATGCCAACAAGGCCTCCTTGAGCCAGGGAGACGCGGCAGCT +
Preference number: 1 (lower is better)
Translates to: AGTQILNPKHLGDVP*HANKASLSQGDAAA
Trigger: AGCTGCCGCGTCTCCCTGGCTCAAGGAGGCCTTGTTGGCATGTCATGGCACATCTCCTAGATGTTTTGGGTTCAAGATCTGGGTTCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR CCA 90 bp ACTGCTTCTTCACACACAGGCCACTACGCATGCAGTGCACATGACTaGCATGACAGAGATGCTGTGGGCCCTCTCCGTTCTGAAGGCCTT +
Preference number: 1 (lower is better)
Translates to: TASSHTGHYACSAHD*HDRDAVGPLRSEGL
Trigger: AAGGCCTTCAGAACGGAGAGGGCCCACAGCATCTCTGTCATGCCAGTCATGTGCACTGCATGCGTAGTGGCCTGTGTGTGAAGAAGCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR TCA 90 bp GAAAGTTCCACTGGGACACTGCCCAGACCTCGCATTAGACAGGAATaGTGTTTACCCACTTATCTTGCCTCCCACAGGCGGGCGATGGTC +
Preference number: 1 (lower is better)
Translates to: ESSTGTLPRPRIRQE*CLPTYLASHRRAMV
Trigger: GACCATCGCCCGCCTGTGGGAGGCAAGATAAGTGGGTAAACATCATTCCTGTCTAATGCGAGGTCTGGGCAGTGTCCCAGTGGAACTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR TCA 90 bp GGAGAACAATGCCACCGTGTTGAACACACTGGGGCAGGCTGTGGTTaGCAGCTGCAGGCTTCTGCCAGCCTAGCATCCAAATTACTTCCT +
Preference number: 1 (lower is better)
Translates to: GEQCHRVEHTGAGCG*QLQASASLASKLLP
Trigger: AGGAAGTAATTTGGATGCTAGGCTGGCAGAAGCCTGCAGCTGTCAACCACAGCCTGCCCCAGTGTGTTCAACACGGTGGCATTGTTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR GCA 90 bp GCCAGGATACTGCAGACAGGCACGAGCTTTCTGTCTCTGGGCCCTTaGTTGGCTGTTTCCATGAACTCATCATTGACTGCACCCATGGGA +
Preference number: 1 (lower is better)
Translates to: ARILQTGTSFLSLGP*LAVSMNSSLTAPMG
Trigger: TCCCATGGGTGCAGTCAATGATGAGTTCATGGAAACAGCCAAGCAAGGGCCCAGAGACAGAAAGCTCGTGCCTGTCTGCAGTATCCTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR CCA 90 bp CCGTCATCACCTCTTCTTTGTAGTGTCTTATTTACCCTATCAGGCTaGGAAGTCCCTGAAGGGAGACTCCCCATGCTCCCCACCCAGTGC +
Preference number: 1 (lower is better)
Translates to: PSSPLLCSVLFTLSG*EVPEGRLPMLPTQC
Trigger: GCACTGGGTGGGGAGCATGGGGAGTCTCCCTTCAGGGACTTCCCAGCCTGATAGGGTAAATAAGACACTACAAAGAAGAGGTGATGACGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR GCA 90 bp AACCCAGATCTTGAACCCAAAACATCTAGGAGATGTGCCATGACATaGCAACAAGGCCTCCTTGAGCCAGGGAGACGCGGCAGCTTTCTG +
Preference number: 1 (lower is better)
Translates to: NPDLEPKTSRRCAMT*QQGLLEPGRRGSFL
Trigger: CAGAAAGCTGCCGCGTCTCCCTGGCTCAAGGAGGCCTTGTTGGCATGTCATGGCACATCTCCTAGATGTTTTGGGTTCAAGATCTGGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR GCA 90 bp TCTCGGTCCTCCCTTGGCACTCTCTGGAAAGTTCCACTGGGACACTaGCCAGACCTCGCATTAGACAGGAATGATGTTTACCCACTTATC +
Preference number: 1 (lower is better)
Translates to: SRSSLGTLWKVPLGH*PDLALDRNDVYPLI
Trigger: GATAAGTGGGTAAACATCATTCCTGTCTAATGCGAGGTCTGGGCAGTGTCCCAGTGGAACTTTCCAGAGAGTGCCAAGGGAGGACCGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR CCA 90 bp CTCATCATTGACTGCACCCATGGGACCACTTCCTCCTCATCCTTTTaGGGACCCAATAAAAGGTCTGCTCCTTGGCAGTGCTGTTCATGG +
Preference number: 1 (lower is better)
Translates to: LIIDCTHGTTSSSSF*GPNKRSAPWQCCSW
Trigger: CCATGAACAGCACTGCCAAGGAGCAGACCTTTTATTGGGTCCCCAAAAGGATGAGGAGGAAGTGGTCCCATGGGTGCAGTCAATGATGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR CCA 90 bp TTTGGGAGTGACTGTCTTCTGATTATGCTCAATTGTGGGCTGAAGTaGGTGGCTCCATCTTTATTGCAAAGGCCGGGCCATGGGGTTGGC +
Preference number: 1 (lower is better)
Translates to: FGSDCLLIMLNCGLK*VAPSLLQRPGHGVG
Trigger: GCCAACCCCATGGCCCGGCCTTTGCAATAAAGATGGAGCCACCCACTTCAGCCCACAATTGAGCATAATCAGAAGACAGTCACTCCCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR TCA 90 bp GCTAGCCCTGCTGCTGGGTGGCGTTGCTTCAGTAGAAGGGGATTCTaGAGGAGAATGGTCAGTGTTTATAAGACTGAAGCTGGAACAGAG +
Preference number: 1 (lower is better)
Translates to: ASPAAGWRCFSRRGF*RRMVSVYKTEAGTE
Trigger: CTCTGTTCCAGCTTCAGTCTTATAAACACTGACCATTCTCCTTCAGAATCCCCTTCTACTGAAGCAACGCCACCCAGCAGCAGGGCTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR CCA 90 bp CTGCTGGGTGGCGTTGCTTCAGTAGAAGGGGATTCTGAAGGAGAATaGTCAGTGTTTATAAGACTGAAGCTGGAACAGAGCACAGAGAGA +
Preference number: 1 (lower is better)
Translates to: LLGGVASVEGDSEGE*SVFIRLKLEQSTER
Trigger: TCTCTCTGTGCTCTGTTCCAGCTTCAGTCTTATAAACACTGACCATTCTCCTTCAGAATCCCCTTCTACTGAAGCAACGCCACCCAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR TCA 90 bp AGCTGGAACAGAGCACAGAGAGAAGTCTCCCTTAATGCACGATTTTaGGACAATTCCCTGGCTTACAGACCAGGTCCAACTCCTCATTCT +
Preference number: 1 (lower is better)
Translates to: SWNRAQREVSLNARF*DNSLAYRPGPTPHS
Trigger: AGAATGAGGAGTTGGACCTGGTCTGTAAGCCAGGGAATTGTCTCAAAATCGTGCATTAAGGGAGACTTCTCTCTGTGCTCTGTTCCAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR CCA 90 bp CACAGAGAGAAGTCTCCCTTAATGCACGATTTTGAGACAATTCCCTaGCTTACAGACCAGGTCCAACTCCTCATTCTTTCAGGCGTTGGT +
Preference number: 1 (lower is better)
Translates to: HREKSPLMHDFETIP*LTDQVQLLILSGVG
Trigger: ACCAACGCCTGAAAGAATGAGGAGTTGGACCTGGTCTGTAAGCCAGGGAATTGTCTCAAAATCGTGCATTAAGGGAGACTTCTCTCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR TCA 90 bp TTCCAAAAGAGCCTTGTGCAATGTGAAACTCTTTGGAGAAGTTGCTaGAGAAGAGCTATGAAGATGCCCTCATTGAATCCACTGTGCTTC +
Preference number: 1 (lower is better)
Translates to: FQKSLVQCETLWRSC*RRAMKMPSLNPLCF
Trigger: GAAGCACAGTGGATTCAATGAGGGCATCTTCATAGCTCTTCTTCAGCAACTTCTCCAAAGAGTTTCACATTGCACAAGGCTCTTTTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR CCA 90 bp CATCTTTGTAGCAAGAAAAAGAATGCACAGATCATGATCATCCACTaGGGAAAGAGTAAGCTCACTTTAACTCAGATTCCTGGACGTGCT +
Preference number: 1 (lower is better)
Translates to: HLCSKKKNAQIMIIH*GKSKLTLTQIPGRA
Trigger: AGCACGTCCAGGAATCTGAGTTAAAGTGAGCTTACTCTTTCCCCAGTGGATGATCATGATCTGTGCATTCTTTTTCTTGCTACAAAGATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR GCA 90 bp GAGGCCGTCCTCAACCCTGGCCGCCGACAGCCAACACAGCAGCTAGGAGGAACACTCCAGGACACTCCCTaGCAGCCCCGGAGTGGACCA +
Preference number: 2 (lower is better)
Translates to: EAVLNPGRRQPTQQLGGTLQDTP*QPRSGP
Trigger: TGGTCCACTCCGGGGCTGGCAGGGAGTGTCCTGGAG...TGTTCCTCCTAGCTGCTGTGTTGGCTGTCGGCGGCCAGGGTTGAGGACGGCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CCA 90 bp CTCCTGGTCACTGCCCTCCTGGCTCCAGCAGAGGTCATGCCCCTTCTCGGTCCTGGCCGTCCTCAACCCTaGCCGCCGACAGCCAACACA +
Preference number: 2 (lower is better)
Translates to: LLVTALLAPAEVMPLLGPGRPQP*PPTANT
Trigger: TGTGTTGGCTGTCGGCGGCCAGGGTTGAGGACGGCC...AGGACCGAGAAGGGGCATGACCTCTGCTGGAGCCAGGAGGGCAGTGACCAGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR GCA 90 bp GAGGCCGTCCTCAACCCTGGCCGCCGACAGCCAACACAGCAGCTAGGAGGAACATCTCCTGTGGCCCTGTaGCCCTCCTGTGGCCGTCAT +
Preference number: 2 (lower is better)
Translates to: EAVLNPGRRQPTQQLGGTSPVAL*PSCGRH
Trigger: ATGACGGCCACAGGAGGGGCACAGGGCCACAGGAGA...TGTTCCTCCTAGCTGCTGTGTTGGCTGTCGGCGGCCAGGGTTGAGGACGGCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CCA 90 bp GCCAGGTACTGTGAGTGCACTTGGGGCACAAGTGCGAAGAGAAAGGCGGGACCCCTGCCAGCCCCGGAGTaGACCAGGCTGCAGAACCCC +
Preference number: 2 (lower is better)
Translates to: ARYCECTWGTSAKRKAGPLPAPE*TRLQNP
Trigger: GGGGTTCTGCAGCCTGGTCCACTCCGGGGCTGGCAG...GGGTCCCGCCTTTCTCTTCGCACTTGTGCCCCAAGTGCACTCACAGTACCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR TCA 90 bp GAGGCCGTCCTCAACCCTGGCCGCCGACAGCCAACACAGCAGCTAGGAGGAACAAGGCTGGGAAGTCCCTaGAGGGAGACTCCCCATGCT +
Preference number: 2 (lower is better)
Translates to: EAVLNPGRRQPTQQLGGTRLGSP*RETPHA
Trigger: AGCATGGGGAGTCTCCCTTCAGGGACTTCCCAGCCT...TGTTCCTCCTAGCTGCTGTGTTGGCTGTCGGCGGCCAGGGTTGAGGACGGCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR GCA 90 bp CTCCTGGTCACTGCCCTCCTGGCTCCAGCAGAGGTCATGCCCCTTCTCGGTCCTATCGTGCCACTGCACTaGACTCCAGCCTGGCGAGAG +
Preference number: 2 (lower is better)
Translates to: LLVTALLAPAEVMPLLGPIVPLH*TPAWRE
Trigger: CTCTCGCCAGGCTGGAGTGCAGTGCAGTGGCACGAT...AGGACCGAGAAGGGGCATGACCTCTGCTGGAGCCAGGAGGGCAGTGACCAGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR GCA 90 bp CTCCTGGTCACTGCCCTCCTGGCTCCAGCAGAGGTCATGCCCCTTCTCGGTCCTCTGAGATCGTGCCACTaGACTGCACTCCAGCCTGGC +
Preference number: 2 (lower is better)
Translates to: LLVTALLAPAEVMPLLGPLRSCH*TALQPG
Trigger: GCCAGGCTGGAGTGCAGTGCAGTGGCACGATCTCAG...AGGACCGAGAAGGGGCATGACCTCTGCTGGAGCCAGGAGGGCAGTGACCAGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CCA 90 bp CTCCTGGTCACTGCCCTCCTGGCTCCAGCAGAGGTCATGCCCCTTCTCGGTCCTCTGGCTTGGGTGGCTTaGGCGAGTCCTGTTCAGCCA +
Preference number: 2 (lower is better)
Translates to: LLVTALLAPAEVMPLLGPLAWVA*ASPVQP
Trigger: TGGCTGAACAGGACTCGCCCAAGCCACCCAAGCCAG...AGGACCGAGAAGGGGCATGACCTCTGCTGGAGCCAGGAGGGCAGTGACCAGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CCA 90 bp GAGGCCGTCCTCAACCCTGGCCGCCGACAGCCAACACAGCAGCTAGGAGGAACAAGCCTTCTCTGTCCCTaGCTTGGGTGGCTTGGGCGA +
Preference number: 2 (lower is better)
Translates to: EAVLNPGRRQPTQQLGGTSLLCP*LGWLGR
Trigger: TCGCCCAAGCCACCCAAGCCAGGGACAGAGAAGGCT...TGTTCCTCCTAGCTGCTGTGTTGGCTGTCGGCGGCCAGGGTTGAGGACGGCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CCA 90 bp CTCCTGGTCACTGCCCTCCTGGCTCCAGCAGAGGTCATGCCCCTTCTCGGTCCTAGGCGGAGGTTGCAGTaGGCTGAGATCGTGCCACTG +
Preference number: 2 (lower is better)
Translates to: LLVTALLAPAEVMPLLGPRRRLQ*AEIVPL
Trigger: CAGTGGCACGATCTCAGCCCACTGCAACCTCCGCCT...AGGACCGAGAAGGGGCATGACCTCTGCTGGAGCCAGGAGGGCAGTGACCAGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR TCA 90 bp ATGACATGCCAACAAGGCCTCCTTGAGCCAGGGAGACGCGGCAGCTTTCTGGACCCCACCCTCCCGAGTTaGGCCTACTTGGGGCCAACC +
Preference number: 2 (lower is better)
Translates to: MTCQQGLLEPGRRGSFLDPTLPS*AYLGPT
Trigger: GGTTGGCCCCAAGTAGGCTCAACTCGGGAGGGTGGG...GTCCAGAAAGCTGCCGCGTCTCCCTGGCTCAAGGAGGCCTTGTTGGCATGTCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR GCA 90 bp GAGGCCGTCCTCAACCCTGGCCGCCGACAGCCAACACAGCAGCTAGGAGGAACATCTGCTCCTTGGCAGTaGTGTTCATGGGTCCCCAGC +
Preference number: 2 (lower is better)
Translates to: EAVLNPGRRQPTQQLGGTSAPWQ*CSWVPS
Trigger: GCTGGGGACCCATGAACAGCACTGCCAAGGAGCAGA...TGTTCCTCCTAGCTGCTGTGTTGGCTGTCGGCGGCCAGGGTTGAGGACGGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR GCA 90 bp CTCCTGGTCACTGCCCTCCTGGCTCCAGCAGAGGTCATGCCCCTTCTCGGTCCTGCCAGGTACTGTGAGTaGACTTGGGGCACAAGTGCG +
Preference number: 2 (lower is better)
Translates to: LLVTALLAPAEVMPLLGPARYCE*TWGTSA
Trigger: CGCACTTGTGCCCCAAGTGCACTCACAGTACCTGGC...AGGACCGAGAAGGGGCATGACCTCTGCTGGAGCCAGGAGGGCAGTGACCAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CCA 90 bp CCTGGCTTGGGTGGCTTGGGCGAGTCCTGTTCAGCCAGGACTACCCTGCAGATGGTGCCCCAGGCAATCTaGCCCAGCCAGGATACTGCA +
Preference number: 2 (lower is better)
Translates to: PGLGGLGESCSARTTLQMVPQAI*PSQDTA
Trigger: TGCAGTATCCTGGCTGGGCCAGATTGCCTGGGGCAC...CATCTGCAGGGTAGTCCTGGCTGAACAGGACTCGCCCAAGCCACCCAAGCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CCA 90 bp ATGACATGCCAACAAGGCCTCCTTGAGCCAGGGAGACGCGGCAGCTTTCTGGACGGGGCCAACCTACGCTaGGTCTCCTGGTCCCTCTCC +
Preference number: 2 (lower is better)
Translates to: MTCQQGLLEPGRRGSFLDGANLR*VSWSLS
Trigger: GGAGAGGGACCAGGAGACCCAGCGTAGGTTGGCCCC...GTCCAGAAAGCTGCCGCGTCTCCCTGGCTCAAGGAGGCCTTGTTGGCATGTCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CCA 90 bp GAGGCCGTCCTCAACCCTGGCCGCCGACAGCCAACACAGCAGCTAGGAGGAACACGAGTTGAGCCTACTTaGGGCCAACCTACGCTGGGT +
Preference number: 2 (lower is better)
Translates to: EAVLNPGRRQPTQQLGGTRVEPT*GQPTLG
Trigger: ACCCAGCGTAGGTTGGCCCCAAGTAGGCTCAACTCG...TGTTCCTCCTAGCTGCTGTGTTGGCTGTCGGCGGCCAGGGTTGAGGACGGCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR GCA 90 bp GAGGCCGTCCTCAACCCTGGCCGCCGACAGCCAACACAGCAGCTAGGAGGAACAGTGCCCAGCACACACTaGTTCTTCACACACAGGCCA +
Preference number: 2 (lower is better)
Translates to: EAVLNPGRRQPTQQLGGTVPSTH*FFTHRP
Trigger: TGGCCTGTGTGTGAAGAAGCAGTGTGTGCTGGGCAC...TGTTCCTCCTAGCTGCTGTGTTGGCTGTCGGCGGCCAGGGTTGAGGACGGCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR GCA 90 bp CTCCTGGTCACTGCCCTCCTGGCTCCAGCAGAGGTCATGCCCCTTCTCGGTCCTGTGCCCAGCACACACTaGTTCTTCACACACAGGCCA +
Preference number: 2 (lower is better)
Translates to: LLVTALLAPAEVMPLLGPVPSTH*FFTHRP
Trigger: TGGCCTGTGTGTGAAGAAGCAGTGTGTGCTGGGCAC...AGGACCGAGAAGGGGCATGACCTCTGCTGGAGCCAGGAGGGCAGTGACCAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR GCA 90 bp GAGGCCGTCCTCAACCCTGGCCGCCGACAGCCAACACAGCAGCTAGGAGGAACAAGCAGCTGGAGGAGATaGTTCTTCCCCTGTCCTCAG +
Preference number: 2 (lower is better)
Translates to: EAVLNPGRRQPTQQLGGTSSWRR*FFPCPQ
Trigger: CTGAGGACAGGGGAAGAAGCATCTCCTCCAGCTGCT...TGTTCCTCCTAGCTGCTGTGTTGGCTGTCGGCGGCCAGGGTTGAGGACGGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CCA 90 bp GCCAGGTACTGTGAGTGCACTTGGGGCACAAGTGCGAAGAGAAAGGCGGGACCCGTGCCCCAGGCAATCTaGCCCAGCCAGGATACTGCA +
Preference number: 2 (lower is better)
Translates to: ARYCECTWGTSAKRKAGPVPQAI*PSQDTA
Trigger: TGCAGTATCCTGGCTGGGCCAGATTGCCTGGGGCAC...GGGTCCCGCCTTTCTCTTCGCACTTGTGCCCCAAGTGCACTCACAGTACCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CCA 90 bp CTGATTGAGAAACACTGCCCCATGCCGGCCACCCAAGAGGTCACCCACATGCCATGGGCAAAGGCAGCCTaGGTCAGCCCACTCCAGGAC +
Preference number: 2 (lower is better)
Translates to: LIEKHCPMPATQEVTHMPWAKAA*VSPLQD
Trigger: GTCCTGGAGTGGGCTGACCCAGGCTGCCTTTGCCCA...TGGCATGTGGGTGACCTCTTGGGTGGCCGGCATGGGGCAGTGTTTCTCAATCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CCA 90 bp GAGGCCGTCCTCAACCCTGGCCGCCGACAGCCAACACAGCAGCTAGGAGGAACATATGTGTCTGAGAGGTaGGCAAAGGCAGCCTGGGTC +
Preference number: 2 (lower is better)
Translates to: EAVLNPGRRQPTQQLGGTYVSER*AKAAWV
Trigger: GACCCAGGCTGCCTTTGCCCACCTCTCAGACACATA...TGTTCCTCCTAGCTGCTGTGTTGGCTGTCGGCGGCCAGGGTTGAGGACGGCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CCA 90 bp GCCAGGTACTGTGAGTGCACTTGGGGCACAAGTGCGAAGAGAAAGGCGGGACCCTCTCTGTCCCTGGCTTaGGTGGCTTGGGCGAGTCCT +
Preference number: 2 (lower is better)
Translates to: ARYCECTWGTSAKRKAGPSLSLA*VAWASP
Trigger: AGGACTCGCCCAAGCCACCCAAGCCAGGGACAGAGA...GGGTCCCGCCTTTCTCTTCGCACTTGTGCCCCAAGTGCACTCACAGTACCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CCA 90 bp GAGGCCGTCCTCAACCCTGGCCGCCGACAGCCAACACAGCAGCTAGGAGGAACATTTAACTCAGATTCCTaGACGTGCTCGGGGCCCAGG +
Preference number: 2 (lower is better)
Translates to: EAVLNPGRRQPTQQLGGTFNSDS*TCSGPR
Trigger: CCTGGGCCCCGAGCACGTCCAGGAATCTGAGTTAAA...TGTTCCTCCTAGCTGCTGTGTTGGCTGTCGGCGGCCAGGGTTGAGGACGGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR GCA 90 bp GCCAGGTACTGTGAGTGCACTTGGGGCACAAGTGCGAAGAGAAAGGCGGGACCCATGCTCCCCACCCAGTaGCCAGCACACACTGCTTCT +
Preference number: 2 (lower is better)
Translates to: ARYCECTWGTSAKRKAGPMLPTQ*PAHTAS
Trigger: AGAAGCAGTGTGTGCTGGGCACTGGGTGGGGAGCAT...GGGTCCCGCCTTTCTCTTCGCACTTGTGCCCCAAGTGCACTCACAGTACCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR GCA 90 bp GCCAGGTACTGTGAGTGCACTTGGGGCACAAGTGCGAAGAGAAAGGCGGGACCCTCTGCTCCTTGGCAGTaGTGTTCATGGGTCCCCAGC +
Preference number: 2 (lower is better)
Translates to: ARYCECTWGTSAKRKAGPSAPWQ*CSWVPS
Trigger: GCTGGGGACCCATGAACAGCACTGCCAAGGAGCAGA...GGGTCCCGCCTTTCTCTTCGCACTTGTGCCCCAAGTGCACTCACAGTACCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR GCA 90 bp CTGATTGAGAAACACTGCCCCATGCCGGCCACCCAAGAGGTCACCCACATGCCACGGAGTGGACCAGGCTaGAGAACCCCACATCCCTGT +
Preference number: 2 (lower is better)
Translates to: LIEKHCPMPATQEVTHMPRSGPG*RTPHPC
Trigger: ACAGGGATGTGGGGTTCTGCAGCCTGGTCCACTCCG...TGGCATGTGGGTGACCTCTTGGGTGGCCGGCATGGGGCAGTGTTTCTCAATCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR GCA 90 bp GGAAAGAGTAAGCTCACTTTAACTCAGATTCCTGGACGTGCTCGGGGCCCAGGCCTCCAGGACACTCCCTaGCAGCCCCGGAGTGGACCA +
Preference number: 2 (lower is better)
Translates to: GKSKLTLTQIPGRARGPGLQDTP*QPRSGP
Trigger: TGGTCCACTCCGGGGCTGGCAGGGAGTGTCCTGGAG...GCCTGGGCCCCGAGCACGTCCAGGAATCTGAGTTAAAGTGAGCTTACTCTTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CCA 90 bp CTCCTGGTCACTGCCCTCCTGGCTCCAGCAGAGGTCATGCCCCTTCTCGGTCCTATGACAGAGATGCTGTaGGCCCTCTCCGTTCTGAAG +
Preference number: 2 (lower is better)
Translates to: LLVTALLAPAEVMPLLGPMTEML*ALSVLK
Trigger: CTTCAGAACGGAGAGGGCCCACAGCATCTCTGTCAT...AGGACCGAGAAGGGGCATGACCTCTGCTGGAGCCAGGAGGGCAGTGACCAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CCA 90 bp CTGATTGAGAAACACTGCCCCATGCCGGCCACCCAAGAGGTCACCCACATGCCAGTGCCCCAGGCAATCTaGCCCAGCCAGGATACTGCA +
Preference number: 2 (lower is better)
Translates to: LIEKHCPMPATQEVTHMPVPQAI*PSQDTA
Trigger: TGCAGTATCCTGGCTGGGCCAGATTGCCTGGGGCAC...TGGCATGTGGGTGACCTCTTGGGTGGCCGGCATGGGGCAGTGTTTCTCAATCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CCA 90 bp ATGACATGCCAACAAGGCCTCCTTGAGCCAGGGAGACGCGGCAGCTTTCTGGACTGTCCCTGGCTTGGGTaGCTTGGGCGAGTCCTGTTC +
Preference number: 2 (lower is better)
Translates to: MTCQQGLLEPGRRGSFLDCPWLG*LGRVLF
Trigger: GAACAGGACTCGCCCAAGCCACCCAAGCCAGGGACA...GTCCAGAAAGCTGCCGCGTCTCCCTGGCTCAAGGAGGCCTTGTTGGCATGTCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CCA 90 bp CTGATTGAGAAACACTGCCCCATGCCGGCCACCCAAGAGGTCACCCACATGCCATCTCTGTCCCTGGCTTaGGTGGCTTGGGCGAGTCCT +
Preference number: 2 (lower is better)
Translates to: LIEKHCPMPATQEVTHMPSLSLA*VAWASP
Trigger: AGGACTCGCCCAAGCCACCCAAGCCAGGGACAGAGA...TGGCATGTGGGTGACCTCTTGGGTGGCCGGCATGGGGCAGTGTTTCTCAATCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CCA 90 bp GGAAAGAGTAAGCTCACTTTAACTCAGATTCCTGGACGTGCTCGGGGCCCAGGCGGGGCCAACCTACGCTaGGTCTCCTGGTCCCTCTCC +
Preference number: 2 (lower is better)
Translates to: GKSKLTLTQIPGRARGPGGANLR*VSWSLS
Trigger: GGAGAGGGACCAGGAGACCCAGCGTAGGTTGGCCCC...GCCTGGGCCCCGAGCACGTCCAGGAATCTGAGTTAAAGTGAGCTTACTCTTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR GCA 90 bp CTGATTGAGAAACACTGCCCCATGCCGGCCACCCAAGAGGTCACCCACATGCCAATGCTCCCCACCCAGTaGCCAGCACACACTGCTTCT +
Preference number: 2 (lower is better)
Translates to: LIEKHCPMPATQEVTHMPMLPTQ*PAHTAS
Trigger: AGAAGCAGTGTGTGCTGGGCACTGGGTGGGGAGCAT...TGGCATGTGGGTGACCTCTTGGGTGGCCGGCATGGGGCAGTGTTTCTCAATCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR GCA 90 bp GGAAAGAGTAAGCTCACTTTAACTCAGATTCCTGGACGTGCTCGGGGCCCAGGCTCTCCTGTGGCCCTGTaGCCCTCCTGTGGCCGTCAT +
Preference number: 2 (lower is better)
Translates to: GKSKLTLTQIPGRARGPGSPVAL*PSCGRH
Trigger: ATGACGGCCACAGGAGGGGCACAGGGCCACAGGAGA...GCCTGGGCCCCGAGCACGTCCAGGAATCTGAGTTAAAGTGAGCTTACTCTTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CCA 90 bp ATGACATGCCAACAAGGCCTCCTTGAGCCAGGGAGACGCGGCAGCTTTCTGGACCCTGTGCCCCTCCTGTaGCCGTCATCACCTCTTCTT +
Preference number: 2 (lower is better)
Translates to: MTCQQGLLEPGRRGSFLDPVPLL*PSSPLL
Trigger: AAGAAGAGGTGATGACGGCCACAGGAGGGGCACAGG...GTCCAGAAAGCTGCCGCGTCTCCCTGGCTCAAGGAGGCCTTGTTGGCATGTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CCA 90 bp CTCCTGGTCACTGCCCTCCTGGCTCCAGCAGAGGTCATGCCCCTTCTCGGTCCTAAAAGGTCTGCTCCTTaGCAGTGCTGTTCATGGGTC +
Preference number: 2 (lower is better)
Translates to: LLVTALLAPAEVMPLLGPKRSAP*QCCSWV
Trigger: GACCCATGAACAGCACTGCCAAGGAGCAGACCTTTT...AGGACCGAGAAGGGGCATGACCTCTGCTGGAGCCAGGAGGGCAGTGACCAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CCA 90 bp ATGACATGCCAACAAGGCCTCCTTGAGCCAGGGAGACGCGGCAGCTTTCTGGACAGCCCTGCTGCTGGGTaGCGTTGCTTCAGTAGAAGG +
Preference number: 2 (lower is better)
Translates to: MTCQQGLLEPGRRGSFLDSPAAG*RCFSRR
Trigger: CCTTCTACTGAAGCAACGCCACCCAGCAGCAGGGCT...GTCCAGAAAGCTGCCGCGTCTCCCTGGCTCAAGGAGGCCTTGTTGGCATGTCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CCA 90 bp CTGATTGAGAAACACTGCCCCATGCCGGCCACCCAAGAGGTCACCCACATGCCAAGCCCTGCTGCTGGGTaGCGTTGCTTCAGTAGAAGG +
Preference number: 2 (lower is better)
Translates to: LIEKHCPMPATQEVTHMPSPAAG*RCFSRR
Trigger: CCTTCTACTGAAGCAACGCCACCCAGCAGCAGGGCT...TGGCATGTGGGTGACCTCTTGGGTGGCCGGCATGGGGCAGTGTTTCTCAATCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CCA 90 bp GGAAAGAGTAAGCTCACTTTAACTCAGATTCCTGGACGTGCTCGGGGCCCAGGCTGGGCAAAGGCAGCCTaGGTCAGCCCACTCCAGGAC +
Preference number: 2 (lower is better)
Translates to: GKSKLTLTQIPGRARGPGWAKAA*VSPLQD
Trigger: GTCCTGGAGTGGGCTGACCCAGGCTGCCTTTGCCCA...GCCTGGGCCCCGAGCACGTCCAGGAATCTGAGTTAAAGTGAGCTTACTCTTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CCA 90 bp AGTAAGCTCACTTTAACTCAGATTCCTGGACGTGCTCGGGGCCCAGGCCCTCTGCTACGCTGGGTCTCCTaGTCCCTCTCCTTGGTGGCA +
Preference number: 2 (lower is better)
Translates to: SKLTLTQIPGRARGPGPLLRWVS*SLSLVA
Trigger: TGCCACCAAGGAGAGGGACCAGGAGACCCAGCGTAG...CAGAGGGCCTGGGCCCCGAGCACGTCCAGGAATCTGAGTTAAAGTGAGCTTACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CCA 90 bp CTCCTGGTCACTGCCCTCCTGGCTCCAGCAGAGGTCATGCCCCTTCTCGGTCCTGCACTGAGTCTGTTTTaGGCACCTTGCTTTGGGAAG +
Preference number: 2 (lower is better)
Translates to: LLVTALLAPAEVMPLLGPALSLF*APCFGK
Trigger: CTTCCCAAAGCAAGGTGCCCAAAACAGACTCAGTGC...AGGACCGAGAAGGGGCATGACCTCTGCTGGAGCCAGGAGGGCAGTGACCAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR GCA 90 bp AGTAAGCTCACTTTAACTCAGATTCCTGGACGTGCTCGGGGCCCAGGCCCTCTGATGCTCCCCACCCAGTaGCCAGCACACACTGCTTCT +
Preference number: 2 (lower is better)
Translates to: SKLTLTQIPGRARGPGPLMLPTQ*PAHTAS
Trigger: AGAAGCAGTGTGTGCTGGGCACTGGGTGGGGAGCAT...CAGAGGGCCTGGGCCCCGAGCACGTCCAGGAATCTGAGTTAAAGTGAGCTTACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR GCA 90 bp AGTAAGCTCACTTTAACTCAGATTCCTGGACGTGCTCGGGGCCCAGGCCCTCTGAGTTTTGGCAAGACCTaGCTGTCCTGCCTGGTGGGC +
Preference number: 2 (lower is better)
Translates to: SKLTLTQIPGRARGPGPLSFGKT*LSCLVG
Trigger: GCCCACCAGGCAGGACAGGCAGGTCTTGCCAAAACT...CAGAGGGCCTGGGCCCCGAGCACGTCCAGGAATCTGAGTTAAAGTGAGCTTACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CCA 90 bp CCTGGCTTGGGTGGCTTGGGCGAGTCCTGTTCAGCCAGGACTACCCTGCAGATGTTTACCCTATCAGGCTaGGAAGTCCCTGAAGGGAGA +
Preference number: 2 (lower is better)
Translates to: PGLGGLGESCSARTTLQMFTLSG*EVPEGR
Trigger: TCTCCCTTCAGGGACTTCCCAGCCTGATAGGGTAAA...CATCTGCAGGGTAGTCCTGGCTGAACAGGACTCGCCCAAGCCACCCAAGCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CCA 90 bp CTGATTGAGAAACACTGCCCCATGCCGGCCACCCAAGAGGTCACCCACATGCCATGGCAGTGCTGTTCATaGGTCCCCAGCAGAGTGAGA +
Preference number: 2 (lower is better)
Translates to: LIEKHCPMPATQEVTHMPWQCCS*VPSRVR
Trigger: TCTCACTCTGCTGGGGACCCATGAACAGCACTGCCA...TGGCATGTGGGTGACCTCTTGGGTGGCCGGCATGGGGCAGTGTTTCTCAATCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CCA 90 bp CCTGGCTTGGGTGGCTTGGGCGAGTCCTGTTCAGCCAGGACTACCCTGCAGATGAAAAGGTCTGCTCCTTaGCAGTGCTGTTCATGGGTC +
Preference number: 2 (lower is better)
Translates to: PGLGGLGESCSARTTLQMKRSAP*QCCSWV
Trigger: GACCCATGAACAGCACTGCCAAGGAGCAGACCTTTT...CATCTGCAGGGTAGTCCTGGCTGAACAGGACTCGCCCAAGCCACCCAAGCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CCA 90 bp GCTCAATTGTGGGCTGAAGTGGGTGGCTCCATCTTTATTGCAAAGGCCGGGCCAGTGCCCCAGGCAATCTaGCCCAGCCAGGATACTGCA +
Preference number: 2 (lower is better)
Translates to: AQLWAEVGGSIFIAKAGPVPQAI*PSQDTA
Trigger: TGCAGTATCCTGGCTGGGCCAGATTGCCTGGGGCAC...TGGCCCGGCCTTTGCAATAAAGATGGAGCCACCCACTTCAGCCCACAATTGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CCA 90 bp TTGGTGGCAGAAATAGGTTTCCAACAGGCTCCAGTTTTGGCAAGACCTGCCTGTCTGCCAGCCCCGGAGTaGACCAGGCTGCAGAACCCC +
Preference number: 2 (lower is better)
Translates to: LVAEIGFQQAPVLARPACLPAPE*TRLQNP
Trigger: GGGGTTCTGCAGCCTGGTCCACTCCGGGGCTGGCAG...ACAGGCAGGTCTTGCCAAAACTGGAGCCTGTTGGAAACCTATTTCTGCCACCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CCA 90 bp GGAAAGAGTAAGCTCACTTTAACTCAGATTCCTGGACGTGCTCGGGGCCCAGGCAGCCTTCTCTGTCCCTaGCTTGGGTGGCTTGGGCGA +
Preference number: 2 (lower is better)
Translates to: GKSKLTLTQIPGRARGPGSLLCP*LGWLGR
Trigger: TCGCCCAAGCCACCCAAGCCAGGGACAGAGAAGGCT...GCCTGGGCCCCGAGCACGTCCAGGAATCTGAGTTAAAGTGAGCTTACTCTTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CCA 90 bp GGAAAGAGTAAGCTCACTTTAACTCAGATTCCTGGACGTGCTCGGGGCCCAGGCCTACGCTGGGTCTCCTaGTCCCTCTCCTTGGTGGCA +
Preference number: 2 (lower is better)
Translates to: GKSKLTLTQIPGRARGPGLRWVS*SLSLVA
Trigger: TGCCACCAAGGAGAGGGACCAGGAGACCCAGCGTAG...GCCTGGGCCCCGAGCACGTCCAGGAATCTGAGTTAAAGTGAGCTTACTCTTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR CAA 90 bp ATGTGTCCATTGAGGGCATCGGGGGCCTCAGATCCGAGTAAACCCTaGCTTAACTCTCAGCCGCCAACTGGAGGAGCCAAGCAACAGGGT +
Preference number: 2 (lower is better)
Translates to: MCPLRASGASDPSKP*LNSQPPTGGAKQQG
Trigger: ACCCTGTTGCTTGGCTCCTCCAGTTGGCGGCTGAGAGTTAAGCAAGGGTTTACTCGGATCTGAGGCCCCCGATGCCCTCAATGGACACAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR TCA 90 bp AGTAAGCTCACTTTAACTCAGATTCCTGGACGTGCTCGGGGCCCAGGCCCTCTGCTACTTTTCCAGCCTTaGCCACAAACCCTGTGCCCC +
Preference number: 2 (lower is better)
Translates to: SKLTLTQIPGRARGPGPLLLFQP*PQTLCP
Trigger: GGGGCACAGGGTTTGTGGTCAAGGCTGGAAAAGTAG...CAGAGGGCCTGGGCCCCGAGCACGTCCAGGAATCTGAGTTAAAGTGAGCTTACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR TCA 90 bp GAGGCCGTCCTCAACCCTGGCCGCCGACAGCCAACACAGCAGCTAGGAGGAACAAGTAGAAGGGGATTCTaGAGGAGAATGGTCAGTGTT +
Preference number: 2 (lower is better)
Translates to: EAVLNPGRRQPTQQLGGTSRRGF*RRMVSV
Trigger: AACACTGACCATTCTCCTTCAGAATCCCCTTCTACT...TGTTCCTCCTAGCTGCTGTGTTGGCTGTCGGCGGCCAGGGTTGAGGACGGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR TCA 90 bp AAGCCATATGCACATCTGCCCCACTTCCCTAAAGCACTGAGTCTGTTTTGGGCACCCACCCTCCCGAGTTaGGCCTACTTGGGGCCAACC +
Preference number: 2 (lower is better)
Translates to: KPYAHLPHFPKALSLFWAPTLPS*AYLGPT
Trigger: GGTTGGCCCCAAGTAGGCTCAACTCGGGAGGGTGGG...TGCCCAAAACAGACTCAGTGCTTTAGGGAAGTGGGGCAGATGTGCATATGGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR TCA 90 bp AAGATCAGACATCTGAAATCTGTGAAGCACCGGTTTCGACCTCGGGGATTCCTCCCAACAAGGCCTCCTTaGGCCAGGGAGACGCGGCAG +
Preference number: 2 (lower is better)
Translates to: KIRHLKSVKHRFRPRGFLPTRPP*ARETRQ
Trigger: CTGCCGCGTCTCCCTGGCTCAAGGAGGCCTTGTTGG...GAGGAATCCCCGAGGTCGAAACCGGTGCTTCACAGATTTCAGATGTCTGATCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR GCA 90 bp CTGATTGAGAAACACTGCCCCATGCCGGCCACCCAAGAGGTCACCCACATGCCAACAGGCCACTACGCATaGAGTGCACATGACTGGCAT +
Preference number: 2 (lower is better)
Translates to: LIEKHCPMPATQEVTHMPTGHYA*SAHDWH
Trigger: ATGCCAGTCATGTGCACTGCATGCGTAGTGGCCTGT...TGGCATGTGGGTGACCTCTTGGGTGGCCGGCATGGGGCAGTGTTTCTCAATCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR GCA 90 bp GGAAAGAGTAAGCTCACTTTAACTCAGATTCCTGGACGTGCTCGGGGCCCAGGCTCTGCTCCTTGGCAGTaGTGTTCATGGGTCCCCAGC +
Preference number: 2 (lower is better)
Translates to: GKSKLTLTQIPGRARGPGSAPWQ*CSWVPS
Trigger: GCTGGGGACCCATGAACAGCACTGCCAAGGAGCAGA...GCCTGGGCCCCGAGCACGTCCAGGAATCTGAGTTAAAGTGAGCTTACTCTTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR GCA 90 bp GGAAAGAGTAAGCTCACTTTAACTCAGATTCCTGGACGTGCTCGGGGCCCAGGCAGAAACACTGCCCCATaGCGGCCACCCAAGAGGTCA +
Preference number: 2 (lower is better)
Translates to: GKSKLTLTQIPGRARGPGRNTAP*RPPKRS
Trigger: TGACCTCTTGGGTGGCCGGCATGGGGCAGTGTTTCT...GCCTGGGCCCCGAGCACGTCCAGGAATCTGAGTTAAAGTGAGCTTACTCTTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CCA 90 bp GCTCAATTGTGGGCTGAAGTGGGTGGCTCCATCTTTATTGCAAAGGCCGGGCCACCTGTGCCCCTCCTGTaGCCGTCATCACCTCTTCTT +
Preference number: 2 (lower is better)
Translates to: AQLWAEVGGSIFIAKAGPPVPLL*PSSPLL
Trigger: AAGAAGAGGTGATGACGGCCACAGGAGGGGCACAGG...TGGCCCGGCCTTTGCAATAAAGATGGAGCCACCCACTTCAGCCCACAATTGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CCA 90 bp AGTAAGCTCACTTTAACTCAGATTCCTGGACGTGCTCGGGGCCCAGGCCCTCTGTATGTGTCTGAGAGGTaGGCAAAGGCAGCCTGGGTC +
Preference number: 2 (lower is better)
Translates to: SKLTLTQIPGRARGPGPLYVSER*AKAAWV
Trigger: GACCCAGGCTGCCTTTGCCCACCTCTCAGACACATA...CAGAGGGCCTGGGCCCCGAGCACGTCCAGGAATCTGAGTTAAAGTGAGCTTACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CCA 90 bp AAGATCAGACATCTGAAATCTGTGAAGCACCGGTTTCGACCTCGGGGATTCCTCGCAAAGGCCGGGCCATaGGGTTGGCAGCAGCTGGAG +
Preference number: 2 (lower is better)
Translates to: KIRHLKSVKHRFRPRGFLAKAGP*GWQQLE
Trigger: CTCCAGCTGCTGCCAACCCCATGGCCCGGCCTTTGC...GAGGAATCCCCGAGGTCGAAACCGGTGCTTCACAGATTTCAGATGTCTGATCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CCA 90 bp GCCAGGTACTGTGAGTGCACTTGGGGCACAAGTGCGAAGAGAAAGGCGGGACCCGATTATGCTCAATTGTaGGCTGAAGTGGGTGGCTCC +
Preference number: 2 (lower is better)
Translates to: ARYCECTWGTSAKRKAGPDYAQL*AEVGGS
Trigger: GGAGCCACCCACTTCAGCCCACAATTGAGCATAATC...GGGTCCCGCCTTTCTCTTCGCACTTGTGCCCCAAGTGCACTCACAGTACCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CCA 90 bp AAGCCATATGCACATCTGCCCCACTTCCCTAAAGCACTGAGTCTGTTTTGGGCAGGCCGTCCTCAACCCTaGCCGCCGACAGCCAACACA +
Preference number: 2 (lower is better)
Translates to: KPYAHLPHFPKALSLFWAGRPQP*PPTANT
Trigger: TGTGTTGGCTGTCGGCGGCCAGGGTTGAGGACGGCC...TGCCCAAAACAGACTCAGTGCTTTAGGGAAGTGGGGCAGATGTGCATATGGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR CAA 90 bp CTGATTATGCTCAATTGTGGGCTGAAGTGGGTGGCTCCATCTTTATaGCAAAGGCCGGGCCATGGGGTTGGCAGCAGCTGGAGGAGATGC +
Preference number: 2 (lower is better)
Translates to: LIMLNCGLKWVAPSL*QRPGHGVGSSWRRC
Trigger: GCATCTCCTCCAGCTGCTGCCAACCCCATGGCCCGGCCTTTGCAATAAAGATGGAGCCACCCACTTCAGCCCACAATTGAGCATAATCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR CAA 90 bp AGCCTACTTGGGGCCAACCTACGCTGGGTCTCCTGGTCCCTCTCCTaGGTGGCAGAAATAGGTTTCCAACAGGCTCCAGTTTTGGCAAGA +
Preference number: 2 (lower is better)
Translates to: SLLGANLRWVSWSLS*VAEIGFQQAPVLAR
Trigger: TCTTGCCAAAACTGGAGCCTGTTGGAAACCTATTTCTGCCACCAAGGAGAGGGACCAGGAGACCCAGCGTAGGTTGGCCCCAAGTAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR TCA 90 bp GAGGCCGTCCTCAACCCTGGCCGCCGACAGCCAACACAGCAGCTAGGAGGAACACTTAATGCACGATTTTaGGACAATTCCCTGGCTTAC +
Preference number: 2 (lower is better)
Translates to: EAVLNPGRRQPTQQLGGTLNARF*DNSLAY
Trigger: GTAAGCCAGGGAATTGTCTCAAAATCGTGCATTAAG...TGTTCCTCCTAGCTGCTGTGTTGGCTGTCGGCGGCCAGGGTTGAGGACGGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR TCA 90 bp GGAAAGAGTAAGCTCACTTTAACTCAGATTCCTGGACGTGCTCGGGGCCCAGGCCACTGTGGTCTGGCTTaGGTGCCTTGGTTGTTAGGG +
Preference number: 2 (lower is better)
Translates to: GKSKLTLTQIPGRARGPGHCGLA*VPWLLG
Trigger: CCCTAACAACCAAGGCACTCAAGCCAGACCACAGTG...GCCTGGGCCCCGAGCACGTCCAGGAATCTGAGTTAAAGTGAGCTTACTCTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CCA 90 bp CTCCTGGTCACTGCCCTCCTGGCTCCAGCAGAGGTCATGCCCCTTCTCGGTCCTCATTCTTTCAGGCGTTaGTCATCTAGCTACAACCTA +
Preference number: 2 (lower is better)
Translates to: LLVTALLAPAEVMPLLGPHSFRR*SSSYNL
Trigger: TAGGTTGTAGCTAGATGACCAACGCCTGAAAGAATG...AGGACCGAGAAGGGGCATGACCTCTGCTGGAGCCAGGAGGGCAGTGACCAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CCA 90 bp TTGTCTCCCTCTGAATTTACTGACCACTCCTGCTTCCAAAAGAGCCTTGTGCAACTGCCAGCCCCGGAGTaGACCAGGCTGCAGAACCCC +
Preference number: 2 (lower is better)
Translates to: LSPSEFTDHSCFQKSLVQLPAPE*TRLQNP
Trigger: GGGGTTCTGCAGCCTGGTCCACTCCGGGGCTGGCAG...TTGCACAAGGCTCTTTTGGAAGCAGGAGTGGTCAGTAAATTCAGAGGGAGACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CCA 90 bp ATGACATGCCAACAAGGCCTCCTTGAGCCAGGGAGACGCGGCAGCTTTCTGGACGGACTACCCTGCAGATaGTTGTATGTGTCTGAGAGG +
Preference number: 2 (lower is better)
Translates to: MTCQQGLLEPGRRGSFLDGLPCR*LYVSER
Trigger: CCTCTCAGACACATACAACCATCTGCAGGGTAGTCC...GTCCAGAAAGCTGCCGCGTCTCCCTGGCTCAAGGAGGCCTTGTTGGCATGTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR CAA 90 bp AGCCAGGATACTGCAGACAGGCACGAGCTTTCTGTCTCTGGGCCCTaGCTTGGCTGTTTCCATGAACTCATCATTGACTGCACCCATGGG +
Preference number: 2 (lower is better)
Translates to: SQDTADRHELSVSGP*LGCFHELIIDCTHG
Trigger: CCCATGGGTGCAGTCAATGATGAGTTCATGGAAACAGCCAAGCAAGGGCCCAGAGACAGAAAGCTCGTGCCTGTCTGCAGTATCCTGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR TCA 90 bp TTGGTGGCAGAAATAGGTTTCCAACAGGCTCCAGTTTTGGCAAGACCTGCCTGTAGGCTGGGAAGTCCCTaGAGGGAGACTCCCCATGCT +
Preference number: 2 (lower is better)
Translates to: LVAEIGFQQAPVLARPACRLGSP*RETPHA
Trigger: AGCATGGGGAGTCTCCCTTCAGGGACTTCCCAGCCT...ACAGGCAGGTCTTGCCAAAACTGGAGCCTGTTGGAAACCTATTTCTGCCACCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR TCA 90 bp CATCTGAAATCTGTGAAGCACCGGTTTCGACCTCGGGGATTCCTCAGAAGAAGTCCCAGGCCCTCTGATTaGGAAACACTGCCCCATGCC +
Preference number: 2 (lower is better)
Translates to: HLKSVKHRFRPRGFLRRSPRPSD*ETLPHA
Trigger: GGCATGGGGCAGTGTTTCTCAATCAGAGGGCCTGGG...ACTTCTTCTGAGGAATCCCCGAGGTCGAAACCGGTGCTTCACAGATTTCAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR TCA 90 bp CATCTGAAATCTGTGAAGCACCGGTTTCGACCTCGGGGATTCCTCAGAAGAAGTCCTGAATGTGTCCATTaGGGGCATCGGGGGCCTCAG +
Preference number: 2 (lower is better)
Translates to: HLKSVKHRFRPRGFLRRSPECVH*GHRGPQ
Trigger: CTGAGGCCCCCGATGCCCTCAATGGACACATTCAGG...ACTTCTTCTGAGGAATCCCCGAGGTCGAAACCGGTGCTTCACAGATTTCAGATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR GCA 90 bp TTTGGGAGTGACTGTCTTCTGATTATGCTCAATTGTGGGCTGAAGTGGGTGGCTTCTCCTGTGGCCCTGTaGCCCTCCTGTGGCCGTCAT +
Preference number: 2 (lower is better)
Translates to: FGSDCLLIMLNCGLKWVASPVAL*PSCGRH
Trigger: ATGACGGCCACAGGAGGGGCACAGGGCCACAGGAGA...AGCCACCCACTTCAGCCCACAATTGAGCATAATCAGAAGACAGTCACTCCCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR GCA 90 bp TTGGTGGCAGAAATAGGTTTCCAACAGGCTCCAGTTTTGGCAAGACCTGCCTGTCGGAGTGGACCAGGCTaGAGAACCCCACATCCCTGT +
Preference number: 2 (lower is better)
Translates to: LVAEIGFQQAPVLARPACRSGPG*RTPHPC
Trigger: ACAGGGATGTGGGGTTCTGCAGCCTGGTCCACTCCG...ACAGGCAGGTCTTGCCAAAACTGGAGCCTGTTGGAAACCTATTTCTGCCACCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR GCA 90 bp CTCCTGGTCACTGCCCTCCTGGCTCCAGCAGAGGTCATGCCCCTTCTCGGTCCTTCCAAAAGAGCCTTGTaGAATGTGAAACTCTTTGGA +
Preference number: 2 (lower is better)
Translates to: LLVTALLAPAEVMPLLGPSKRAL*NVKLFG
Trigger: TCCAAAGAGTTTCACATTGCACAAGGCTCTTTTGGA...AGGACCGAGAAGGGGCATGACCTCTGCTGGAGCCAGGAGGGCAGTGACCAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR GCA 90 bp GCCAGGTACTGTGAGTGCACTTGGGGCACAAGTGCGAAGAGAAAGGCGGGACCCTTTACTGACCACTCCTaGTTCCAAAAGAGCCTTGTG +
Preference number: 2 (lower is better)
Translates to: ARYCECTWGTSAKRKAGPFTDHS*FQKSLV
Trigger: CACAAGGCTCTTTTGGAAGCAGGAGTGGTCAGTAAA...GGGTCCCGCCTTTCTCTTCGCACTTGTGCCCCAAGTGCACTCACAGTACCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR GCA 90 bp AAGATCAGACATCTGAAATCTGTGAAGCACCGGTTTCGACCTCGGGGATTCCTCCTCCAGCAGAGGTCATaGCCCTTCTCGGTCCTCCCT +
Preference number: 2 (lower is better)
Translates to: KIRHLKSVKHRFRPRGFLLQQRS*PFSVLP
Trigger: AGGGAGGACCGAGAAGGGGCATGACCTCTGCTGGAG...GAGGAATCCCCGAGGTCGAAACCGGTGCTTCACAGATTTCAGATGTCTGATCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CCA 90 bp GCCAGGTACTGTGAGTGCACTTGGGGCACAAGTGCGAAGAGAAAGGCGGGACCCTCCTCCTCATCCTTTTaGGGACCCAATAAAAGGTCT +
Preference number: 2 (lower is better)
Translates to: ARYCECTWGTSAKRKAGPSSSSF*GPNKRS
Trigger: AGACCTTTTATTGGGTCCCCAAAAGGATGAGGAGGA...GGGTCCCGCCTTTCTCTTCGCACTTGTGCCCCAAGTGCACTCACAGTACCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CCA 90 bp CCTGGCTTGGGTGGCTTGGGCGAGTCCTGTTCAGCCAGGACTACCCTGCAGATGCATTCTTTCAGGCGTTaGTCATCTAGCTACAACCTA +
Preference number: 2 (lower is better)
Translates to: PGLGGLGESCSARTTLQMHSFRR*SSSYNL
Trigger: TAGGTTGTAGCTAGATGACCAACGCCTGAAAGAATG...CATCTGCAGGGTAGTCCTGGCTGAACAGGACTCGCCCAAGCCACCCAAGCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CCA 90 bp GGAAAGAGTAAGCTCACTTTAACTCAGATTCCTGGACGTGCTCGGGGCCCAGGCTTGGCCACTGTGGTCTaGCTTGAGTGCCTTGGTTGT +
Preference number: 2 (lower is better)
Translates to: GKSKLTLTQIPGRARGPGLATVV*LECLGC
Trigger: ACAACCAAGGCACTCAAGCCAGACCACAGTGGCCAA...GCCTGGGCCCCGAGCACGTCCAGGAATCTGAGTTAAAGTGAGCTTACTCTTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CCA 90 bp GCTCAATTGTGGGCTGAAGTGGGTGGCTCCATCTTTATTGCAAAGGCCGGGCCATTGGCCACTGTGGTCTaGCTTGAGTGCCTTGGTTGT +
Preference number: 2 (lower is better)
Translates to: AQLWAEVGGSIFIAKAGPLATVV*LECLGC
Trigger: ACAACCAAGGCACTCAAGCCAGACCACAGTGGCCAA...TGGCCCGGCCTTTGCAATAAAGATGGAGCCACCCACTTCAGCCCACAATTGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CCA 90 bp GTCATCACAATCACACAGCTCAGCACCAAAGAAAGCTGTCTCTACTTAGGGTTTCTGCCAGCCCCGGAGTaGACCAGGCTGCAGAACCCC +
Preference number: 2 (lower is better)
Translates to: VITITQLSTKESCLYLGFLPAPE*TRLQNP
Trigger: GGGGTTCTGCAGCCTGGTCCACTCCGGGGCTGGCAG...AAACCCTAAGTAGAGACAGCTTTCTTTGGTGCTGAGCTGTGTGATTGTGATGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CCA 90 bp AAGCCATATGCACATCTGCCCCACTTCCCTAAAGCACTGAGTCTGTTTTGGGCACTGGCTTGGGTGGCTTaGGCGAGTCCTGTTCAGCCA +
Preference number: 2 (lower is better)
Translates to: KPYAHLPHFPKALSLFWALAWVA*ASPVQP
Trigger: TGGCTGAACAGGACTCGCCCAAGCCACCCAAGCCAG...TGCCCAAAACAGACTCAGTGCTTTAGGGAAGTGGGGCAGATGTGCATATGGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CCA 90 bp AAGATCAGACATCTGAAATCTGTGAAGCACCGGTTTCGACCTCGGGGATTCCTCTGTCCCTGGCTTGGGTaGCTTGGGCGAGTCCTGTTC +
Preference number: 2 (lower is better)
Translates to: KIRHLKSVKHRFRPRGFLCPWLG*LGRVLF
Trigger: GAACAGGACTCGCCCAAGCCACCCAAGCCAGGGACA...GAGGAATCCCCGAGGTCGAAACCGGTGCTTCACAGATTTCAGATGTCTGATCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CCA 90 bp AAGCCATATGCACATCTGCCCCACTTCCCTAAAGCACTGAGTCTGTTTTGGGCATGTCCCTGGCTTGGGTaGCTTGGGCGAGTCCTGTTC +
Preference number: 2 (lower is better)
Translates to: KPYAHLPHFPKALSLFWACPWLG*LGRVLF
Trigger: GAACAGGACTCGCCCAAGCCACCCAAGCCAGGGACA...TGCCCAAAACAGACTCAGTGCTTTAGGGAAGTGGGGCAGATGTGCATATGGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CCA 90 bp AAGCCATATGCACATCTGCCCCACTTCCCTAAAGCACTGAGTCTGTTTTGGGCAAGCCTTCTCTGTCCCTaGCTTGGGTGGCTTGGGCGA +
Preference number: 2 (lower is better)
Translates to: KPYAHLPHFPKALSLFWASLLCP*LGWLGR
Trigger: TCGCCCAAGCCACCCAAGCCAGGGACAGAGAAGGCT...TGCCCAAAACAGACTCAGTGCTTTAGGGAAGTGGGGCAGATGTGCATATGGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CCA 90 bp AAGATCAGACATCTGAAATCTGTGAAGCACCGGTTTCGACCTCGGGGATTCCTCAGCCTTCTCTGTCCCTaGCTTGGGTGGCTTGGGCGA +
Preference number: 2 (lower is better)
Translates to: KIRHLKSVKHRFRPRGFLSLLCP*LGWLGR
Trigger: TCGCCCAAGCCACCCAAGCCAGGGACAGAGAAGGCT...GAGGAATCCCCGAGGTCGAAACCGGTGCTTCACAGATTTCAGATGTCTGATCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CCA 90 bp TTGTCTCCCTCTGAATTTACTGACCACTCCTGCTTCCAAAAGAGCCTTGTGCAAGCAAAGGCCGGGCCATaGGGTTGGCAGCAGCTGGAG +
Preference number: 2 (lower is better)
Translates to: LSPSEFTDHSCFQKSLVQAKAGP*GWQQLE
Trigger: CTCCAGCTGCTGCCAACCCCATGGCCCGGCCTTTGC...TTGCACAAGGCTCTTTTGGAAGCAGGAGTGGTCAGTAAATTCAGAGGGAGACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CCA 90 bp GGAAAGAGTAAGCTCACTTTAACTCAGATTCCTGGACGTGCTCGGGGCCCAGGCAACAGGCTCCAGTTTTaGCAAGACCTGCCTGTCCTG +
Preference number: 2 (lower is better)
Translates to: GKSKLTLTQIPGRARGPGNRLQF*QDLPVL
Trigger: CAGGACAGGCAGGTCTTGCCAAAACTGGAGCCTGTT...GCCTGGGCCCCGAGCACGTCCAGGAATCTGAGTTAAAGTGAGCTTACTCTTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CCA 90 bp AAGCCATATGCACATCTGCCCCACTTCCCTAAAGCACTGAGTCTGTTTTGGGCACTACGCTGGGTCTCCTaGTCCCTCTCCTTGGTGGCA +
Preference number: 2 (lower is better)
Translates to: KPYAHLPHFPKALSLFWALRWVS*SLSLVA
Trigger: TGCCACCAAGGAGAGGGACCAGGAGACCCAGCGTAG...TGCCCAAAACAGACTCAGTGCTTTAGGGAAGTGGGGCAGATGTGCATATGGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CCA 90 bp CATCTGAAATCTGTGAAGCACCGGTTTCGACCTCGGGGATTCCTCAGAAGAAGTAGGCGGAGGTTGCAGTaGGCTGAGATCGTGCCACTG +
Preference number: 2 (lower is better)
Translates to: HLKSVKHRFRPRGFLRRSRRRLQ*AEIVPL
Trigger: CAGTGGCACGATCTCAGCCCACTGCAACCTCCGCCT...ACTTCTTCTGAGGAATCCCCGAGGTCGAAACCGGTGCTTCACAGATTTCAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR CAA 90 bp AGGATACTGCAGACAGGCACGAGCTTTCTGTCTCTGGGCCCTTGCTaGGCTGTTTCCATGAACTCATCATTGACTGCACCCATGGGACCA +
Preference number: 2 (lower is better)
Translates to: RILQTGTSFLSLGPC*AVSMNSSLTAPMGP
Trigger: TGGTCCCATGGGTGCAGTCAATGATGAGTTCATGGAAACAGCCAAGCAAGGGCCCAGAGACAGAAAGCTCGTGCCTGTCTGCAGTATCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR TCA 90 bp ATGAACTCATCATTGACTGCACCCATGGGACCACTTCCTCCTCATCCTTTTGGGGGGCCCTCTCCGTTCTaGAGGCCTTGTTTGCAGAAC +
Preference number: 2 (lower is better)
Translates to: MNSSLTAPMGPLPPHPFGGPSPF*RPCLQN
Trigger: GTTCTGCAAACAAGGCCTTCAGAACGGAGAGGGCCC...CCCAAAAGGATGAGGAGGAAGTGGTCCCATGGGTGCAGTCAATGATGAGTTCAT
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR TCA 90 bp CTGATTGAGAAACACTGCCCCATGCCGGCCACCCAAGAGGTCACCCACATGCCAAGTAGAAGGGGATTCTaGAGGAGAATGGTCAGTGTT +
Preference number: 2 (lower is better)
Translates to: LIEKHCPMPATQEVTHMPSRRGF*RRMVSV
Trigger: AACACTGACCATTCTCCTTCAGAATCCCCTTCTACT...TGGCATGTGGGTGACCTCTTGGGTGGCCGGCATGGGGCAGTGTTTCTCAATCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR GCA 90 bp CATCTGAAATCTGTGAAGCACCGGTTTCGACCTCGGGGATTCCTCAGAAGAAGTATGCTCCCCACCCAGTaGCCAGCACACACTGCTTCT +
Preference number: 2 (lower is better)
Translates to: HLKSVKHRFRPRGFLRRSMLPTQ*PAHTAS
Trigger: AGAAGCAGTGTGTGCTGGGCACTGGGTGGGGAGCAT...ACTTCTTCTGAGGAATCCCCGAGGTCGAAACCGGTGCTTCACAGATTTCAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR GCA 90 bp TTGGTGGCAGAAATAGGTTTCCAACAGGCTCCAGTTTTGGCAAGACCTGCCTGTTCTGCTCCTTGGCAGTaGTGTTCATGGGTCCCCAGC +
Preference number: 2 (lower is better)
Translates to: LVAEIGFQQAPVLARPACSAPWQ*CSWVPS
Trigger: GCTGGGGACCCATGAACAGCACTGCCAAGGAGCAGA...ACAGGCAGGTCTTGCCAAAACTGGAGCCTGTTGGAAACCTATTTCTGCCACCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR GCA 90 bp AGAAAGCTGTCTCTACTTAGGGTTTGTCTCCCTCTGAATTTACTGACCACTCCTCTCCAGGACACTCCCTaGCAGCCCCGGAGTGGACCA +
Preference number: 2 (lower is better)
Translates to: RKLSLLRVCLPLNLLTTPLQDTP*QPRSGP
Trigger: TGGTCCACTCCGGGGCTGGCAGGGAGTGTCCTGGAG...AGGAGTGGTCAGTAAATTCAGAGGGAGACAAACCCTAAGTAGAGACAGCTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR GCA 90 bp GGAAAGAGTAAGCTCACTTTAACTCAGATTCCTGGACGTGCTCGGGGCCCAGGCCAGCCAGGACTACCCTaGAGATGGTTGTATGTGTCT +
Preference number: 2 (lower is better)
Translates to: GKSKLTLTQIPGRARGPGQPGLP*RWLYVS
Trigger: AGACACATACAACCATCTGCAGGGTAGTCCTGGCTG...GCCTGGGCCCCGAGCACGTCCAGGAATCTGAGTTAAAGTGAGCTTACTCTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR GCA 90 bp ATGACATGCCAACAAGGCCTCCTTGAGCCAGGGAGACGCGGCAGCTTTCTGGACTTTACTGACCACTCCTaGTTCCAAAAGAGCCTTGTG +
Preference number: 2 (lower is better)
Translates to: MTCQQGLLEPGRRGSFLDFTDHS*FQKSLV
Trigger: CACAAGGCTCTTTTGGAAGCAGGAGTGGTCAGTAAA...GTCCAGAAAGCTGCCGCGTCTCCCTGGCTCAAGGAGGCCTTGTTGGCATGTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR GCA 90 bp AAGATCAGACATCTGAAATCTGTGAAGCACCGGTTTCGACCTCGGGGATTCCTCGCCAGGTACTGTGAGTaGACTTGGGGCACAAGTGCG +
Preference number: 2 (lower is better)
Translates to: KIRHLKSVKHRFRPRGFLARYCE*TWGTSA
Trigger: CGCACTTGTGCCCCAAGTGCACTCACAGTACCTGGC...GAGGAATCCCCGAGGTCGAAACCGGTGCTTCACAGATTTCAGATGTCTGATCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CCA 90 bp TTGGTGGCAGAAATAGGTTTCCAACAGGCTCCAGTTTTGGCAAGACCTGCCTGTCCTGTGCCCCTCCTGTaGCCGTCATCACCTCTTCTT +
Preference number: 2 (lower is better)
Translates to: LVAEIGFQQAPVLARPACPVPLL*PSSPLL
Trigger: AAGAAGAGGTGATGACGGCCACAGGAGGGGCACAGG...ACAGGCAGGTCTTGCCAAAACTGGAGCCTGTTGGAAACCTATTTCTGCCACCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CCA 90 bp ATGACATGCCAACAAGGCCTCCTTGAGCCAGGGAGACGCGGCAGCTTTCTGGACTTTGAGACAATTCCCTaGCTTACAGACCAGGTCCAA +
Preference number: 2 (lower is better)
Translates to: MTCQQGLLEPGRRGSFLDFETIP*LTDQVQ
Trigger: TTGGACCTGGTCTGTAAGCCAGGGAATTGTCTCAAA...GTCCAGAAAGCTGCCGCGTCTCCCTGGCTCAAGGAGGCCTTGTTGGCATGTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CCA 90 bp GCTCAATTGTGGGCTGAAGTGGGTGGCTCCATCTTTATTGCAAAGGCCGGGCCAGGACTACCCTGCAGATaGTTGTATGTGTCTGAGAGG +
Preference number: 2 (lower is better)
Translates to: AQLWAEVGGSIFIAKAGPGLPCR*LYVSER
Trigger: CCTCTCAGACACATACAACCATCTGCAGGGTAGTCC...TGGCCCGGCCTTTGCAATAAAGATGGAGCCACCCACTTCAGCCCACAATTGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CCA 90 bp GTCATCACAATCACACAGCTCAGCACCAAAGAAAGCTGTCTCTACTTAGGGTTTGCAAAGGCCGGGCCATaGGGTTGGCAGCAGCTGGAG +
Preference number: 2 (lower is better)
Translates to: VITITQLSTKESCLYLGFAKAGP*GWQQLE
Trigger: CTCCAGCTGCTGCCAACCCCATGGCCCGGCCTTTGC...AAACCCTAAGTAGAGACAGCTTTCTTTGGTGCTGAGCTGTGTGATTGTGATGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CCA 90 bp GGAAAGAGTAAGCTCACTTTAACTCAGATTCCTGGACGTGCTCGGGGCCCAGGCGATTATGCTCAATTGTaGGCTGAAGTGGGTGGCTCC +
Preference number: 2 (lower is better)
Translates to: GKSKLTLTQIPGRARGPGDYAQL*AEVGGS
Trigger: GGAGCCACCCACTTCAGCCCACAATTGAGCATAATC...GCCTGGGCCCCGAGCACGTCCAGGAATCTGAGTTAAAGTGAGCTTACTCTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR CAA 90 bp TTTCTGTCTCTGGGCCCTTGCTTGGCTGTTTCCATGAACTCATCATaGACTGCACCCATGGGACCACTTCCTCCTCATCCTTTTGGGGAC +
Preference number: 2 (lower is better)
Translates to: FLSLGPCLAVSMNSS*TAPMGPLPPHPFGD
Trigger: GTCCCCAAAAGGATGAGGAGGAAGTGGTCCCATGGGTGCAGTCAATGATGAGTTCATGGAAACAGCCAAGCAAGGGCCCAGAGACAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR TCA 90 bp CATCTGAAATCTGTGAAGCACCGGTTTCGACCTCGGGGATTCCTCAGAAGAAGTCTACTTTTCCAGCCTTaGCCACAAACCCTGTGCCCC +
Preference number: 2 (lower is better)
Translates to: HLKSVKHRFRPRGFLRRSLLFQP*PQTLCP
Trigger: GGGGCACAGGGTTTGTGGTCAAGGCTGGAAAAGTAG...ACTTCTTCTGAGGAATCCCCGAGGTCGAAACCGGTGCTTCACAGATTTCAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR TCA 90 bp CATCTGAAATCTGTGAAGCACCGGTTTCGACCTCGGGGATTCCTCAGAAGAAGTCACTGTGGTCTGGCTTaGGTGCCTTGGTTGTTAGGG +
Preference number: 2 (lower is better)
Translates to: HLKSVKHRFRPRGFLRRSHCGLA*VPWLLG
Trigger: CCCTAACAACCAAGGCACTCAAGCCAGACCACAGTG...ACTTCTTCTGAGGAATCCCCGAGGTCGAAACCGGTGCTTCACAGATTTCAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR TCA 90 bp AAGATCAGACATCTGAAATCTGTGAAGCACCGGTTTCGACCTCGGGGATTCCTCCACTGTGGTCTGGCTTaGGTGCCTTGGTTGTTAGGG +
Preference number: 2 (lower is better)
Translates to: KIRHLKSVKHRFRPRGFLHCGLA*VPWLLG
Trigger: CCCTAACAACCAAGGCACTCAAGCCAGACCACAGTG...GAGGAATCCCCGAGGTCGAAACCGGTGCTTCACAGATTTCAGATGTCTGATCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR TCA 90 bp AGTAAGCTCACTTTAACTCAGATTCCTGGACGTGCTCGGGGCCCAGGCCCTCTGGAGCCTTGTGCAATGTaGAACTCTTTGGAGAAGTTG +
Preference number: 2 (lower is better)
Translates to: SKLTLTQIPGRARGPGPLEPCAM*NSLEKL
Trigger: CAACTTCTCCAAAGAGTTTCACATTGCACAAGGCTC...CAGAGGGCCTGGGCCCCGAGCACGTCCAGGAATCTGAGTTAAAGTGAGCTTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR TCA 90 bp CATCTGAAATCTGTGAAGCACCGGTTTCGACCTCGGGGATTCCTCAGAAGAAGTACATGCCAGGTACTGTaGGTGCACTTGGGGCACAAG +
Preference number: 2 (lower is better)
Translates to: HLKSVKHRFRPRGFLRRSTCQVL*VHLGHK
Trigger: CTTGTGCCCCAAGTGCACTCACAGTACCTGGCATGT...ACTTCTTCTGAGGAATCCCCGAGGTCGAAACCGGTGCTTCACAGATTTCAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR GCA 90 bp TTGTCTCCCTCTGAATTTACTGACCACTCCTGCTTCCAAAAGAGCCTTGTGCAACGGAGTGGACCAGGCTaGAGAACCCCACATCCCTGT +
Preference number: 2 (lower is better)
Translates to: LSPSEFTDHSCFQKSLVQRSGPG*RTPHPC
Trigger: ACAGGGATGTGGGGTTCTGCAGCCTGGTCCACTCCG...TTGCACAAGGCTCTTTTGGAAGCAGGAGTGGTCAGTAAATTCAGAGGGAGACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR GCA 90 bp CATCTGAAATCTGTGAAGCACCGGTTTCGACCTCGGGGATTCCTCAGAAGAAGTTGGCTCCATCTTTATTaGAAAGGCCGGGCCATGGGG +
Preference number: 2 (lower is better)
Translates to: HLKSVKHRFRPRGFLRRSWLHLY*KGRAMG
Trigger: CCCCATGGCCCGGCCTTTGCAATAAAGATGGAGCCA...ACTTCTTCTGAGGAATCCCCGAGGTCGAAACCGGTGCTTCACAGATTTCAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR GCA 90 bp AAGATCAGACATCTGAAATCTGTGAAGCACCGGTTTCGACCTCGGGGATTCCTCCTGATTGAGAAACACTaGCCCATGCCGGCCACCCAA +
Preference number: 2 (lower is better)
Translates to: KIRHLKSVKHRFRPRGFLLIEKH*PMPATQ
Trigger: TTGGGTGGCCGGCATGGGGCAGTGTTTCTCAATCAG...GAGGAATCCCCGAGGTCGAAACCGGTGCTTCACAGATTTCAGATGTCTGATCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR GCA 90 bp AAGATCAGACATCTGAAATCTGTGAAGCACCGGTTTCGACCTCGGGGATTCCTCCCGTCACAAGCCATATaGACATCTGCCCCACTTCCC +
Preference number: 2 (lower is better)
Translates to: KIRHLKSVKHRFRPRGFLPSQAI*TSAPLP
Trigger: GGGAAGTGGGGCAGATGTGCATATGGCTTGTGACGG...GAGGAATCCCCGAGGTCGAAACCGGTGCTTCACAGATTTCAGATGTCTGATCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR GCA 90 bp AAGATCAGACATCTGAAATCTGTGAAGCACCGGTTTCGACCTCGGGGATTCCTCGTTCCACTGGGACACTaGCCAGACCTCGCATTAGAC +
Preference number: 2 (lower is better)
Translates to: KIRHLKSVKHRFRPRGFLVPLGH*PDLALD
Trigger: GTCTAATGCGAGGTCTGGGCAGTGTCCCAGTGGAAC...GAGGAATCCCCGAGGTCGAAACCGGTGCTTCACAGATTTCAGATGTCTGATCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CCA 90 bp TTGGTGGCAGAAATAGGTTTCCAACAGGCTCCAGTTTTGGCAAGACCTGCCTGTTGGCAGTGCTGTTCATaGGTCCCCAGCAGAGTGAGA +
Preference number: 2 (lower is better)
Translates to: LVAEIGFQQAPVLARPACWQCCS*VPSRVR
Trigger: TCTCACTCTGCTGGGGACCCATGAACAGCACTGCCA...ACAGGCAGGTCTTGCCAAAACTGGAGCCTGTTGGAAACCTATTTCTGCCACCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CCA 90 bp AAGCCATATGCACATCTGCCCCACTTCCCTAAAGCACTGAGTCTGTTTTGGGCATGGCAGTGCTGTTCATaGGTCCCCAGCAGAGTGAGA +
Preference number: 2 (lower is better)
Translates to: KPYAHLPHFPKALSLFWAWQCCS*VPSRVR
Trigger: TCTCACTCTGCTGGGGACCCATGAACAGCACTGCCA...TGCCCAAAACAGACTCAGTGCTTTAGGGAAGTGGGGCAGATGTGCATATGGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CCA 90 bp TTTGGGAGTGACTGTCTTCTGATTATGCTCAATTGTGGGCTGAAGTGGGTGGCTCCAGGGCAGGATTCTTaGCCACTGTGGTCTGGCTTG +
Preference number: 2 (lower is better)
Translates to: FGSDCLLIMLNCGLKWVAPGQDS*PLWSGL
Trigger: CAAGCCAGACCACAGTGGCCAAGAATCCTGCCCTGG...AGCCACCCACTTCAGCCCACAATTGAGCATAATCAGAAGACAGTCACTCCCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CCA 90 bp CATCTGAAATCTGTGAAGCACCGGTTTCGACCTCGGGGATTCCTCAGAAGAAGTTATGTGTCTGAGAGGTaGGCAAAGGCAGCCTGGGTC +
Preference number: 2 (lower is better)
Translates to: HLKSVKHRFRPRGFLRRSYVSER*AKAAWV
Trigger: GACCCAGGCTGCCTTTGCCCACCTCTCAGACACATA...ACTTCTTCTGAGGAATCCCCGAGGTCGAAACCGGTGCTTCACAGATTTCAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CCA 90 bp ATGACATGCCAACAAGGCCTCCTTGAGCCAGGGAGACGCGGCAGCTTTCTGGACATCATGATCATCCACTaGGGAAAGAGTAAGCTCACT +
Preference number: 2 (lower is better)
Translates to: MTCQQGLLEPGRRGSFLDIMIIH*GKSKLT
Trigger: AGTGAGCTTACTCTTTCCCCAGTGGATGATCATGAT...GTCCAGAAAGCTGCCGCGTCTCCCTGGCTCAAGGAGGCCTTGTTGGCATGTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR TCA 90 bp TTGTCTCCCTCTGAATTTACTGACCACTCCTGCTTCCAAAAGAGCCTTGTGCAAGGGCCCTCTCCGTTCTaGAGGCCTTGTTTGCAGAAC +
Preference number: 2 (lower is better)
Translates to: LSPSEFTDHSCFQKSLVQGPSPF*RPCLQN
Trigger: GTTCTGCAAACAAGGCCTTCAGAACGGAGAGGGCCC...TTGCACAAGGCTCTTTTGGAAGCAGGAGTGGTCAGTAAATTCAGAGGGAGACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR TCA 90 bp AAGCCATATGCACATCTGCCCCACTTCCCTAAAGCACTGAGTCTGTTTTGGGCAATGGTTGTATGTGTCTaGGAGGTGGGCAAAGGCAGC +
Preference number: 2 (lower is better)
Translates to: KPYAHLPHFPKALSLFWAMVVCV*EVGKGS
Trigger: GCTGCCTTTGCCCACCTCTCAGACACATACAACCAT...TGCCCAAAACAGACTCAGTGCTTTAGGGAAGTGGGGCAGATGTGCATATGGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR TCA 90 bp TTGGTGGCAGAAATAGGTTTCCAACAGGCTCCAGTTTTGGCAAGACCTGCCTGTATGGTTGTATGTGTCTaGGAGGTGGGCAAAGGCAGC +
Preference number: 2 (lower is better)
Translates to: LVAEIGFQQAPVLARPACMVVCV*EVGKGS
Trigger: GCTGCCTTTGCCCACCTCTCAGACACATACAACCAT...ACAGGCAGGTCTTGCCAAAACTGGAGCCTGTTGGAAACCTATTTCTGCCACCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR TCA 90 bp CATCTGAAATCTGTGAAGCACCGGTTTCGACCTCGGGGATTCCTCAGAAGAAGTTGCTCAATTGTGGGCTaGAGTGGGTGGCTCCATCTT +
Preference number: 2 (lower is better)
Translates to: HLKSVKHRFRPRGFLRRSCSIVG*SGWLHL
Trigger: AAGATGGAGCCACCCACTTCAGCCCACAATTGAGCA...ACTTCTTCTGAGGAATCCCCGAGGTCGAAACCGGTGCTTCACAGATTTCAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR TCA 90 bp AAGATCAGACATCTGAAATCTGTGAAGCACCGGTTTCGACCTCGGGGATTCCTCGTGGAGCAGGTGGAGTaGCTATGTGAAGAGGAATGG +
Preference number: 2 (lower is better)
Translates to: KIRHLKSVKHRFRPRGFLVEQVE*LCEEEW
Trigger: CCATTCCTCTTCACATAGTCACTCCACCTGCTCCAC...GAGGAATCCCCGAGGTCGAAACCGGTGCTTCACAGATTTCAGATGTCTGATCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR TCA 90 bp GGGAGGGTCATGTTGTTTTTAATTGCAAATACAGAAGTCAGACAAGAAGCACCACCAACAAGGCCTCCTTaGGCCAGGGAGACGCGGCAG +
Preference number: 2 (lower is better)
Translates to: GRVMLFLIANTEVRQEAPPTRPP*ARETRQ
Trigger: CTGCCGCGTCTCCCTGGCTCAAGGAGGCCTTGTTGG...TGGTGCTTCTTGTCTGACTTCTGTATTTGCAATTAAAAACAACATGACCCTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR GCA 90 bp TGTTTCCATGAACTCATCATTGACTGCACCCATGGGACCACTTCCTCCTCATCCACAGGCCACTACGCATaGAGTGCACATGACTGGCAT +
Preference number: 2 (lower is better)
Translates to: CFHELIIDCTHGTTSSSSTGHYA*SAHDWH
Trigger: ATGCCAGTCATGTGCACTGCATGCGTAGTGGCCTGT...GGATGAGGAGGAAGTGGTCCCATGGGTGCAGTCAATGATGAGTTCATGGAAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR GCA 90 bp AAGCCATATGCACATCTGCCCCACTTCCCTAAAGCACTGAGTCTGTTTTGGGCACTGTCTCTGGGCCCTTaGTTGGCTGTTTCCATGAAC +
Preference number: 2 (lower is better)
Translates to: KPYAHLPHFPKALSLFWALSLGP*LAVSMN
Trigger: GTTCATGGAAACAGCCAAGCAAGGGCCCAGAGACAG...TGCCCAAAACAGACTCAGTGCTTTAGGGAAGTGGGGCAGATGTGCATATGGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR GCA 90 bp CATCTGAAATCTGTGAAGCACCGGTTTCGACCTCGGGGATTCCTCAGAAGAAGTCTGTCTCTGGGCCCTTaGTTGGCTGTTTCCATGAAC +
Preference number: 2 (lower is better)
Translates to: HLKSVKHRFRPRGFLRRSLSLGP*LAVSMN
Trigger: GTTCATGGAAACAGCCAAGCAAGGGCCCAGAGACAG...ACTTCTTCTGAGGAATCCCCGAGGTCGAAACCGGTGCTTCACAGATTTCAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR GCA 90 bp TTTGGGAGTGACTGTCTTCTGATTATGCTCAATTGTGGGCTGAAGTGGGTGGCTAGCAGCTGGAGGAGATaGTTCTTCCCCTGTCCTCAG +
Preference number: 2 (lower is better)
Translates to: FGSDCLLIMLNCGLKWVASSWRR*FFPCPQ
Trigger: CTGAGGACAGGGGAAGAAGCATCTCCTCCAGCTGCT...AGCCACCCACTTCAGCCCACAATTGAGCATAATCAGAAGACAGTCACTCCCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR GCA 90 bp GGAAAGAGTAAGCTCACTTTAACTCAGATTCCTGGACGTGCTCGGGGCCCAGGCTTTACTGACCACTCCTaGTTCCAAAAGAGCCTTGTG +
Preference number: 2 (lower is better)
Translates to: GKSKLTLTQIPGRARGPGFTDHS*FQKSLV
Trigger: CACAAGGCTCTTTTGGAAGCAGGAGTGGTCAGTAAA...GCCTGGGCCCCGAGCACGTCCAGGAATCTGAGTTAAAGTGAGCTTACTCTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CCA 90 bp TGTTTCCATGAACTCATCATTGACTGCACCCATGGGACCACTTCCTCCTCATCCATGACAGAGATGCTGTaGGCCCTCTCCGTTCTGAAG +
Preference number: 2 (lower is better)
Translates to: CFHELIIDCTHGTTSSSSMTEML*ALSVLK
Trigger: CTTCAGAACGGAGAGGGCCCACAGCATCTCTGTCAT...GGATGAGGAGGAAGTGGTCCCATGGGTGCAGTCAATGATGAGTTCATGGAAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CCA 90 bp GCCAGGTACTGTGAGTGCACTTGGGGCACAAGTGCGAAGAGAAAGGCGGGACCCGATTCTGAAGGAGAATaGTCAGTGTTTATAAGACTG +
Preference number: 2 (lower is better)
Translates to: ARYCECTWGTSAKRKAGPDSEGE*SVFIRL
Trigger: CAGTCTTATAAACACTGACCATTCTCCTTCAGAATC...GGGTCCCGCCTTTCTCTTCGCACTTGTGCCCCAAGTGCACTCACAGTACCTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CCA 90 bp TTGGTGGCAGAAATAGGTTTCCAACAGGCTCCAGTTTTGGCAAGACCTGCCTGTTTGGCCACTGTGGTCTaGCTTGAGTGCCTTGGTTGT +
Preference number: 2 (lower is better)
Translates to: LVAEIGFQQAPVLARPACLATVV*LECLGC
Trigger: ACAACCAAGGCACTCAAGCCAGACCACAGTGGCCAA...ACAGGCAGGTCTTGCCAAAACTGGAGCCTGTTGGAAACCTATTTCTGCCACCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CCA 90 bp GTCATCACAATCACACAGCTCAGCACCAAAGAAAGCTGTCTCTACTTAGGGTTTCTGGCTTGGGTGGCTTaGGCGAGTCCTGTTCAGCCA +
Preference number: 2 (lower is better)
Translates to: VITITQLSTKESCLYLGFLAWVA*ASPVQP
Trigger: TGGCTGAACAGGACTCGCCCAAGCCACCCAAGCCAG...AAACCCTAAGTAGAGACAGCTTTCTTTGGTGCTGAGCTGTGTGATTGTGATGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CCA 90 bp GGGAGGGTCATGTTGTTTTTAATTGCAAATACAGAAGTCAGACAAGAAGCACCAGGCCGTCCTCAACCCTaGCCGCCGACAGCCAACACA +
Preference number: 2 (lower is better)
Translates to: GRVMLFLIANTEVRQEAPGRPQP*PPTANT
Trigger: TGTGTTGGCTGTCGGCGGCCAGGGTTGAGGACGGCC...TGGTGCTTCTTGTCTGACTTCTGTATTTGCAATTAAAAACAACATGACCCTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR TCA 90 bp CATCTGAAATCTGTGAAGCACCGGTTTCGACCTCGGGGATTCCTCAGAAGAAGTACGAGGTCAAGAGATTaGGACCATCCTGGCCAACAT +
Preference number: 2 (lower is better)
Translates to: HLKSVKHRFRPRGFLRRSTRSRD*DHPGQH
Trigger: ATGTTGGCCAGGATGGTCTCAATCTCTTGACCTCGT...ACTTCTTCTGAGGAATCCCCGAGGTCGAAACCGGTGCTTCACAGATTTCAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR GCA 90 bp TTTGGGAGTGACTGTCTTCTGATTATGCTCAATTGTGGGCTGAAGTGGGTGGCTACAGGCCACTACGCATaGAGTGCACATGACTGGCAT +
Preference number: 2 (lower is better)
Translates to: FGSDCLLIMLNCGLKWVATGHYA*SAHDWH
Trigger: ATGCCAGTCATGTGCACTGCATGCGTAGTGGCCTGT...AGCCACCCACTTCAGCCCACAATTGAGCATAATCAGAAGACAGTCACTCCCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CCA 90 bp ATGAACTCATCATTGACTGCACCCATGGGACCACTTCCTCCTCATCCTTTTGGGTTTACCCTATCAGGCTaGGAAGTCCCTGAAGGGAGA +
Preference number: 2 (lower is better)
Translates to: MNSSLTAPMGPLPPHPFGFTLSG*EVPEGR
Trigger: TCTCCCTTCAGGGACTTCCCAGCCTGATAGGGTAAA...CCCAAAAGGATGAGGAGGAAGTGGTCCCATGGGTGCAGTCAATGATGAGTTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CCA 90 bp AAGATCAGACATCTGAAATCTGTGAAGCACCGGTTTCGACCTCGGGGATTCCTCTTTACCCTATCAGGCTaGGAAGTCCCTGAAGGGAGA +
Preference number: 2 (lower is better)
Translates to: KIRHLKSVKHRFRPRGFLFTLSG*EVPEGR
Trigger: TCTCCCTTCAGGGACTTCCCAGCCTGATAGGGTAAA...GAGGAATCCCCGAGGTCGAAACCGGTGCTTCACAGATTTCAGATGTCTGATCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CCA 90 bp GTCATCACAATCACACAGCTCAGCACCAAAGAAAGCTGTCTCTACTTAGGGTTTCCTGTGCCCCTCCTGTaGCCGTCATCACCTCTTCTT +
Preference number: 2 (lower is better)
Translates to: VITITQLSTKESCLYLGFPVPLL*PSSPLL
Trigger: AAGAAGAGGTGATGACGGCCACAGGAGGGGCACAGG...AAACCCTAAGTAGAGACAGCTTTCTTTGGTGCTGAGCTGTGTGATTGTGATGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CCA 90 bp TTGTCTCCCTCTGAATTTACTGACCACTCCTGCTTCCAAAAGAGCCTTGTGCAATGGCAGTGCTGTTCATaGGTCCCCAGCAGAGTGAGA +
Preference number: 2 (lower is better)
Translates to: LSPSEFTDHSCFQKSLVQWQCCS*VPSRVR
Trigger: TCTCACTCTGCTGGGGACCCATGAACAGCACTGCCA...TTGCACAAGGCTCTTTTGGAAGCAGGAGTGGTCAGTAAATTCAGAGGGAGACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CCA 90 bp GGGAGGGTCATGTTGTTTTTAATTGCAAATACAGAAGTCAGACAAGAAGCACCATGGGCAAAGGCAGCCTaGGTCAGCCCACTCCAGGAC +
Preference number: 2 (lower is better)
Translates to: GRVMLFLIANTEVRQEAPWAKAA*VSPLQD
Trigger: GTCCTGGAGTGGGCTGACCCAGGCTGCCTTTGCCCA...TGGTGCTTCTTGTCTGACTTCTGTATTTGCAATTAAAAACAACATGACCCTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CCA 90 bp AAGATCAGACATCTGAAATCTGTGAAGCACCGGTTTCGACCTCGGGGATTCCTCGGACTACCCTGCAGATaGTTGTATGTGTCTGAGAGG +
Preference number: 2 (lower is better)
Translates to: KIRHLKSVKHRFRPRGFLGLPCR*LYVSER
Trigger: CCTCTCAGACACATACAACCATCTGCAGGGTAGTCC...GAGGAATCCCCGAGGTCGAAACCGGTGCTTCACAGATTTCAGATGTCTGATCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CCA 90 bp CATCTGAAATCTGTGAAGCACCGGTTTCGACCTCGGGGATTCCTCAGAAGAAGTTACTGTGAGTGCACTTaGGGCACAAGTGCGAAGAGA +
Preference number: 2 (lower is better)
Translates to: HLKSVKHRFRPRGFLRRSYCECT*GTSAKR
Trigger: TCTCTTCGCACTTGTGCCCCAAGTGCACTCACAGTA...ACTTCTTCTGAGGAATCCCCGAGGTCGAAACCGGTGCTTCACAGATTTCAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CCA 90 bp AAGATCAGACATCTGAAATCTGTGAAGCACCGGTTTCGACCTCGGGGATTCCTCTACTGTGAGTGCACTTaGGGCACAAGTGCGAAGAGA +
Preference number: 2 (lower is better)
Translates to: KIRHLKSVKHRFRPRGFLYCECT*GTSAKR
Trigger: TCTCTTCGCACTTGTGCCCCAAGTGCACTCACAGTA...GAGGAATCCCCGAGGTCGAAACCGGTGCTTCACAGATTTCAGATGTCTGATCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR GCA 90 bp TTTGGGAGTGACTGTCTTCTGATTATGCTCAATTGTGGGCTGAAGTGGGTGGCTGAACTCATCATTGACTaGACCCATGGGACCACTTCC +
Preference number: 2 (lower is better)
Translates to: FGSDCLLIMLNCGLKWVAELIID*THGTTS
Trigger: GGAAGTGGTCCCATGGGTGCAGTCAATGATGAGTTC...AGCCACCCACTTCAGCCCACAATTGAGCATAATCAGAAGACAGTCACTCCCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR GCA 90 bp TTGTCTCCCTCTGAATTTACTGACCACTCCTGCTTCCAAAAGAGCCTTGTGCAACTGTCTCTGGGCCCTTaGTTGGCTGTTTCCATGAAC +
Preference number: 2 (lower is better)
Translates to: LSPSEFTDHSCFQKSLVQLSLGP*LAVSMN
Trigger: GTTCATGGAAACAGCCAAGCAAGGGCCCAGAGACAG...TTGCACAAGGCTCTTTTGGAAGCAGGAGTGGTCAGTAAATTCAGAGGGAGACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR GCA 90 bp AGAAAGCTGTCTCTACTTAGGGTTTGTCTCCCTCTGAATTTACTGACCACTCCTGCTGCTGGGTGGCGTTaGTTCAGTAGAAGGGGATTC +
Preference number: 2 (lower is better)
Translates to: RKLSLLRVCLPLNLLTTPAAGWR*FSRRGF
Trigger: GAATCCCCTTCTACTGAAGCAACGCCACCCAGCAGC...AGGAGTGGTCAGTAAATTCAGAGGGAGACAAACCCTAAGTAGAGACAGCTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR GCA 90 bp GGGAGGGTCATGTTGTTTTTAATTGCAAATACAGAAGTCAGACAAGAAGCACCACGGAGTGGACCAGGCTaGAGAACCCCACATCCCTGT +
Preference number: 2 (lower is better)
Translates to: GRVMLFLIANTEVRQEAPRSGPG*RTPHPC
Trigger: ACAGGGATGTGGGGTTCTGCAGCCTGGTCCACTCCG...TGGTGCTTCTTGTCTGACTTCTGTATTTGCAATTAAAAACAACATGACCCTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR GCA 90 bp TTTGGGAGTGACTGTCTTCTGATTATGCTCAATTGTGGGCTGAAGTGGGTGGCTCAGCCAGGACTACCCTaGAGATGGTTGTATGTGTCT +
Preference number: 2 (lower is better)
Translates to: FGSDCLLIMLNCGLKWVAQPGLP*RWLYVS
Trigger: AGACACATACAACCATCTGCAGGGTAGTCCTGGCTG...AGCCACCCACTTCAGCCCACAATTGAGCATAATCAGAAGACAGTCACTCCCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR GCA 90 bp AGAAAGCTGTCTCTACTTAGGGTTTGTCTCCCTCTGAATTTACTGACCACTCCTAGCAGCTGGAGGAGATaGTTCTTCCCCTGTCCTCAG +
Preference number: 2 (lower is better)
Translates to: RKLSLLRVCLPLNLLTTPSSWRR*FFPCPQ
Trigger: CTGAGGACAGGGGAAGAAGCATCTCCTCCAGCTGCT...AGGAGTGGTCAGTAAATTCAGAGGGAGACAAACCCTAAGTAGAGACAGCTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR GCA 90 bp GTCATCACAATCACACAGCTCAGCACCAAAGAAAGCTGTCTCTACTTAGGGTTTTGGCTCCATCTTTATTaGAAAGGCCGGGCCATGGGG +
Preference number: 2 (lower is better)
Translates to: VITITQLSTKESCLYLGFWLHLY*KGRAMG
Trigger: CCCCATGGCCCGGCCTTTGCAATAAAGATGGAGCCA...AAACCCTAAGTAGAGACAGCTTTCTTTGGTGCTGAGCTGTGTGATTGTGATGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR GCA 90 bp CTAGCATCCAAATTACTTCCTTATTGTGTTTCCTTGCTCAGTGTCAAACAATCCTCAGATTCCTGGACGTaGTCGGGGCCCAGGCCCTCT +
Preference number: 2 (lower is better)
Translates to: LASKLLPYCVSLLSVKQSSDSWT*SGPRPS
Trigger: AGAGGGCCTGGGCCCCGAGCACGTCCAGGAATCTGA...GGATTGTTTGACACTGAGCAAGGAAACACAATAAGGAAGTAATTTGGATGCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CCA 90 bp GCTTCCAAAAGAGCCTTGTGCAATGTGAAACTCTTTGGAGAAGTTGCTGAAGAAAGCCCTGCTGCTGGGTaGCGTTGCTTCAGTAGAAGG +
Preference number: 2 (lower is better)
Translates to: ASKRALCNVKLFGEVAEESPAAG*RCFSRR
Trigger: CCTTCTACTGAAGCAACGCCACCCAGCAGCAGGGCT...TTCTTCAGCAACTTCTCCAAAGAGTTTCACATTGCACAAGGCTCTTTTGGAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CCA 90 bp TTGTCTCCCTCTGAATTTACTGACCACTCCTGCTTCCAAAAGAGCCTTGTGCAATTGGCCACTGTGGTCTaGCTTGAGTGCCTTGGTTGT +
Preference number: 2 (lower is better)
Translates to: LSPSEFTDHSCFQKSLVQLATVV*LECLGC
Trigger: ACAACCAAGGCACTCAAGCCAGACCACAGTGGCCAA...TTGCACAAGGCTCTTTTGGAAGCAGGAGTGGTCAGTAAATTCAGAGGGAGACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CCA 90 bp GGGAGGGTCATGTTGTTTTTAATTGCAAATACAGAAGTCAGACAAGAAGCACCACTCTCAGCCGCCAACTaGAGGAGCCAAGCAACAGGG +
Preference number: 2 (lower is better)
Translates to: GRVMLFLIANTEVRQEAPLSAAN*RSQATG
Trigger: CCCTGTTGCTTGGCTCCTCCAGTTGGCGGCTGAGAG...TGGTGCTTCTTGTCTGACTTCTGTATTTGCAATTAAAAACAACATGACCCTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR TCA 90 bp GCTTCCAAAAGAGCCTTGTGCAATGTGAAACTCTTTGGAGAAGTTGCTGAAGAACTACTTTTCCAGCCTTaGCCACAAACCCTGTGCCCC +
Preference number: 2 (lower is better)
Translates to: ASKRALCNVKLFGEVAEELLFQP*PQTLCP
Trigger: GGGGCACAGGGTTTGTGGTCAAGGCTGGAAAAGTAG...TTCTTCAGCAACTTCTCCAAAGAGTTTCACATTGCACAAGGCTCTTTTGGAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR TCA 90 bp AAGATCAGACATCTGAAATCTGTGAAGCACCGGTTTCGACCTCGGGGATTCCTCAGTAGAAGGGGATTCTaGAGGAGAATGGTCAGTGTT +
Preference number: 2 (lower is better)
Translates to: KIRHLKSVKHRFRPRGFLSRRGF*RRMVSV
Trigger: AACACTGACCATTCTCCTTCAGAATCCCCTTCTACT...GAGGAATCCCCGAGGTCGAAACCGGTGCTTCACAGATTTCAGATGTCTGATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR TCA 90 bp GTCATCACAATCACACAGCTCAGCACCAAAGAAAGCTGTCTCTACTTAGGGTTTATGGTTGTATGTGTCTaGGAGGTGGGCAAAGGCAGC +
Preference number: 2 (lower is better)
Translates to: VITITQLSTKESCLYLGFMVVCV*EVGKGS
Trigger: GCTGCCTTTGCCCACCTCTCAGACACATACAACCAT...AAACCCTAAGTAGAGACAGCTTTCTTTGGTGCTGAGCTGTGTGATTGTGATGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR TCA 90 bp AGAAAGCTGTCTCTACTTAGGGTTTGTCTCCCTCTGAATTTACTGACCACTCCTTGCTCAATTGTGGGCTaGAGTGGGTGGCTCCATCTT +
Preference number: 2 (lower is better)
Translates to: RKLSLLRVCLPLNLLTTPCSIVG*SGWLHL
Trigger: AAGATGGAGCCACCCACTTCAGCCCACAATTGAGCA...AGGAGTGGTCAGTAAATTCAGAGGGAGACAAACCCTAAGTAGAGACAGCTTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR TCA 90 bp CATCTGAAATCTGTGAAGCACCGGTTTCGACCTCGGGGATTCCTCAGAAGAAGTGAGCCTTGTGCAATGTaGAACTCTTTGGAGAAGTTG +
Preference number: 2 (lower is better)
Translates to: HLKSVKHRFRPRGFLRRSEPCAM*NSLEKL
Trigger: CAACTTCTCCAAAGAGTTTCACATTGCACAAGGCTC...ACTTCTTCTGAGGAATCCCCGAGGTCGAAACCGGTGCTTCACAGATTTCAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CCA 90 bp AGAAAGCTGTCTCTACTTAGGGTTTGTCTCCCTCTGAATTTACTGACCACTCCTATGACAGAGATGCTGTaGGCCCTCTCCGTTCTGAAG +
Preference number: 2 (lower is better)
Translates to: RKLSLLRVCLPLNLLTTPMTEML*ALSVLK
Trigger: CTTCAGAACGGAGAGGGCCCACAGCATCTCTGTCAT...AGGAGTGGTCAGTAAATTCAGAGGGAGACAAACCCTAAGTAGAGACAGCTTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CCA 90 bp TTGTCTCCCTCTGAATTTACTGACCACTCCTGCTTCCAAAAGAGCCTTGTGCAATGCAGTGCACATGACTaGCATGACAGAGATGCTGTG +
Preference number: 2 (lower is better)
Translates to: LSPSEFTDHSCFQKSLVQCSAHD*HDRDAV
Trigger: CACAGCATCTCTGTCATGCCAGTCATGTGCACTGCA...TTGCACAAGGCTCTTTTGGAAGCAGGAGTGGTCAGTAAATTCAGAGGGAGACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CCA 90 bp CATCTGAAATCTGTGAAGCACCGGTTTCGACCTCGGGGATTCCTCAGAAGAAGTTCCTCCTCATCCTTTTaGGGACCCAATAAAAGGTCT +
Preference number: 2 (lower is better)
Translates to: HLKSVKHRFRPRGFLRRSSSSSF*GPNKRS
Trigger: AGACCTTTTATTGGGTCCCCAAAAGGATGAGGAGGA...ACTTCTTCTGAGGAATCCCCGAGGTCGAAACCGGTGCTTCACAGATTTCAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CCA 90 bp TTGGTGGCAGAAATAGGTTTCCAACAGGCTCCAGTTTTGGCAAGACCTGCCTGTTTTGAGACAATTCCCTaGCTTACAGACCAGGTCCAA +
Preference number: 2 (lower is better)
Translates to: LVAEIGFQQAPVLARPACFETIP*LTDQVQ
Trigger: TTGGACCTGGTCTGTAAGCCAGGGAATTGTCTCAAA...ACAGGCAGGTCTTGCCAAAACTGGAGCCTGTTGGAAACCTATTTCTGCCACCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CCA 90 bp GGAAAGAGTAAGCTCACTTTAACTCAGATTCCTGGACGTGCTCGGGGCCCAGGCGATTCTGAAGGAGAATaGTCAGTGTTTATAAGACTG +
Preference number: 2 (lower is better)
Translates to: GKSKLTLTQIPGRARGPGDSEGE*SVFIRL
Trigger: CAGTCTTATAAACACTGACCATTCTCCTTCAGAATC...GCCTGGGCCCCGAGCACGTCCAGGAATCTGAGTTAAAGTGAGCTTACTCTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CCA 90 bp TTGTCTCCCTCTGAATTTACTGACCACTCCTGCTTCCAAAAGAGCCTTGTGCAAGGACTACCCTGCAGATaGTTGTATGTGTCTGAGAGG +
Preference number: 2 (lower is better)
Translates to: LSPSEFTDHSCFQKSLVQGLPCR*LYVSER
Trigger: CCTCTCAGACACATACAACCATCTGCAGGGTAGTCC...TTGCACAAGGCTCTTTTGGAAGCAGGAGTGGTCAGTAAATTCAGAGGGAGACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CCA 90 bp GTACTGCAACAGCCTTCTATTAAAGTGAAAACAGGAGTGATAGGAATATATTTCGCAAAGGCCGGGCCATaGGGTTGGCAGCAGCTGGAG +
Preference number: 2 (lower is better)
Translates to: VLQQPSIKVKTGVIGIYFAKAGP*GWQQLE
Trigger: CTCCAGCTGCTGCCAACCCCATGGCCCGGCCTTTGC...GAAATATATTCCTATCACTCCTGTTTTCACTTTAATAGAAGGCTGTTGCAGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CCA 90 bp GTACTGCAACAGCCTTCTATTAAAGTGAAAACAGGAGTGATAGGAATATATTTCGGGGCCAACCTACGCTaGGTCTCCTGGTCCCTCTCC +
Preference number: 2 (lower is better)
Translates to: VLQQPSIKVKTGVIGIYFGANLR*VSWSLS
Trigger: GGAGAGGGACCAGGAGACCCAGCGTAGGTTGGCCCC...GAAATATATTCCTATCACTCCTGTTTTCACTTTAATAGAAGGCTGTTGCAGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR TCA 90 bp AAGATCAGACATCTGAAATCTGTGAAGCACCGGTTTCGACCTCGGGGATTCCTCCTTAATGCACGATTTTaGGACAATTCCCTGGCTTAC +
Preference number: 2 (lower is better)
Translates to: KIRHLKSVKHRFRPRGFLLNARF*DNSLAY
Trigger: GTAAGCCAGGGAATTGTCTCAAAATCGTGCATTAAG...GAGGAATCCCCGAGGTCGAAACCGGTGCTTCACAGATTTCAGATGTCTGATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR TCA 90 bp TTGTCTCCCTCTGAATTTACTGACCACTCCTGCTTCCAAAAGAGCCTTGTGCAAGGAGTGACTGTCTTCTaGTTATGCTCAATTGTGGGC +
Preference number: 2 (lower is better)
Translates to: LSPSEFTDHSCFQKSLVQGVTVF*LCSIVG
Trigger: GCCCACAATTGAGCATAATCAGAAGACAGTCACTCC...TTGCACAAGGCTCTTTTGGAAGCAGGAGTGGTCAGTAAATTCAGAGGGAGACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR GCA 90 bp GTACTGCAACAGCCTTCTATTAAAGTGAAAACAGGAGTGATAGGAATATATTTCTCTCCTGTGGCCCTGTaGCCCTCCTGTGGCCGTCAT +
Preference number: 2 (lower is better)
Translates to: VLQQPSIKVKTGVIGIYFSPVAL*PSCGRH
Trigger: ATGACGGCCACAGGAGGGGCACAGGGCCACAGGAGA...GAAATATATTCCTATCACTCCTGTTTTCACTTTAATAGAAGGCTGTTGCAGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR GCA 90 bp CTAGCATCCAAATTACTTCCTTATTGTGTTTCCTTGCTCAGTGTCAAACAATCCAGTTTTGGCAAGACCTaGCTGTCCTGCCTGGTGGGC +
Preference number: 2 (lower is better)
Translates to: LASKLLPYCVSLLSVKQSSFGKT*LSCLVG
Trigger: GCCCACCAGGCAGGACAGGCAGGTCTTGCCAAAACT...GGATTGTTTGACACTGAGCAAGGAAACACAATAAGGAAGTAATTTGGATGCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR GCA 90 bp CTAGCATCCAAATTACTTCCTTATTGTGTTTCCTTGCTCAGTGTCAAACAATCCGCCAGGTACTGTGAGTaGACTTGGGGCACAAGTGCG +
Preference number: 2 (lower is better)
Translates to: LASKLLPYCVSLLSVKQSARYCE*TWGTSA
Trigger: CGCACTTGTGCCCCAAGTGCACTCACAGTACCTGGC...GGATTGTTTGACACTGAGCAAGGAAACACAATAAGGAAGTAATTTGGATGCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CCA 90 bp GTCATCACAATCACACAGCTCAGCACCAAAGAAAGCTGTCTCTACTTAGGGTTTAAAAGGTCTGCTCCTTaGCAGTGCTGTTCATGGGTC +
Preference number: 2 (lower is better)
Translates to: VITITQLSTKESCLYLGFKRSAP*QCCSWV
Trigger: GACCCATGAACAGCACTGCCAAGGAGCAGACCTTTT...AAACCCTAAGTAGAGACAGCTTTCTTTGGTGCTGAGCTGTGTGATTGTGATGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CCA 90 bp GTCATCACAATCACACAGCTCAGCACCAAAGAAAGCTGTCTCTACTTAGGGTTTGATTATGCTCAATTGTaGGCTGAAGTGGGTGGCTCC +
Preference number: 2 (lower is better)
Translates to: VITITQLSTKESCLYLGFDYAQL*AEVGGS
Trigger: GGAGCCACCCACTTCAGCCCACAATTGAGCATAATC...AAACCCTAAGTAGAGACAGCTTTCTTTGGTGCTGAGCTGTGTGATTGTGATGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CCA 90 bp AGAAAGCTGTCTCTACTTAGGGTTTGTCTCCCTCTGAATTTACTGACCACTCCTGATTATGCTCAATTGTaGGCTGAAGTGGGTGGCTCC +
Preference number: 2 (lower is better)
Translates to: RKLSLLRVCLPLNLLTTPDYAQL*AEVGGS
Trigger: GGAGCCACCCACTTCAGCCCACAATTGAGCATAATC...AGGAGTGGTCAGTAAATTCAGAGGGAGACAAACCCTAAGTAGAGACAGCTTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR GCA 90 bp CATCTGAAATCTGTGAAGCACCGGTTTCGACCTCGGGGATTCCTCAGAAGAAGTTCCAAAAGAGCCTTGTaGAATGTGAAACTCTTTGGA +
Preference number: 2 (lower is better)
Translates to: HLKSVKHRFRPRGFLRRSSKRAL*NVKLFG
Trigger: TCCAAAGAGTTTCACATTGCACAAGGCTCTTTTGGA...ACTTCTTCTGAGGAATCCCCGAGGTCGAAACCGGTGCTTCACAGATTTCAGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR GCA 90 bp TTGGTGGCAGAAATAGGTTTCCAACAGGCTCCAGTTTTGGCAAGACCTGCCTGTTCCAAAAGAGCCTTGTaGAATGTGAAACTCTTTGGA +
Preference number: 2 (lower is better)
Translates to: LVAEIGFQQAPVLARPACSKRAL*NVKLFG
Trigger: TCCAAAGAGTTTCACATTGCACAAGGCTCTTTTGGA...ACAGGCAGGTCTTGCCAAAACTGGAGCCTGTTGGAAACCTATTTCTGCCACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CCA 90 bp TTGTCTCCCTCTGAATTTACTGACCACTCCTGCTTCCAAAAGAGCCTTGTGCAATCCTCCTCATCCTTTTaGGGACCCAATAAAAGGTCT +
Preference number: 2 (lower is better)
Translates to: LSPSEFTDHSCFQKSLVQSSSSF*GPNKRS
Trigger: AGACCTTTTATTGGGTCCCCAAAAGGATGAGGAGGA...TTGCACAAGGCTCTTTTGGAAGCAGGAGTGGTCAGTAAATTCAGAGGGAGACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CCA 90 bp CTAGCATCCAAATTACTTCCTTATTGTGTTTCCTTGCTCAGTGTCAAACAATCCTATGTGTCTGAGAGGTaGGCAAAGGCAGCCTGGGTC +
Preference number: 2 (lower is better)
Translates to: LASKLLPYCVSLLSVKQSYVSER*AKAAWV
Trigger: GACCCAGGCTGCCTTTGCCCACCTCTCAGACACATA...GGATTGTTTGACACTGAGCAAGGAAACACAATAAGGAAGTAATTTGGATGCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CCA 90 bp GTACTGCAACAGCCTTCTATTAAAGTGAAAACAGGAGTGATAGGAATATATTTCTCTCTGTCCCTGGCTTaGGTGGCTTGGGCGAGTCCT +
Preference number: 2 (lower is better)
Translates to: VLQQPSIKVKTGVIGIYFSLSLA*VAWASP
Trigger: AGGACTCGCCCAAGCCACCCAAGCCAGGGACAGAGA...GAAATATATTCCTATCACTCCTGTTTTCACTTTAATAGAAGGCTGTTGCAGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CCA 90 bp GGGAGGGTCATGTTGTTTTTAATTGCAAATACAGAAGTCAGACAAGAAGCACCAAACAGGCTCCAGTTTTaGCAAGACCTGCCTGTCCTG +
Preference number: 2 (lower is better)
Translates to: GRVMLFLIANTEVRQEAPNRLQF*QDLPVL
Trigger: CAGGACAGGCAGGTCTTGCCAAAACTGGAGCCTGTT...TGGTGCTTCTTGTCTGACTTCTGTATTTGCAATTAAAAACAACATGACCCTCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR CAA 90 bp TGTCTCCCTCTGAATTTACTGACCACTCCTGCTTCCAAAAGAGCCTaGTGCAATGTGAAACTCTTTGGAGAAGTTGCTGAAGAAGAGCTA +
Preference number: 2 (lower is better)
Translates to: CLPLNLLTTPASKRA*CNVKLFGEVAEEEL
Trigger: TAGCTCTTCTTCAGCAACTTCTCCAAAGAGTTTCACATTGCACAAGGCTCTTTTGGAAGCAGGAGTGGTCAGTAAATTCAGAGGGAGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR TCA 90 bp GTACTGCAACAGCCTTCTATTAAAGTGAAAACAGGAGTGATAGGAATATATTTCGGGCCCTCTCCGTTCTaGAGGCCTTGTTTGCAGAAC +
Preference number: 2 (lower is better)
Translates to: VLQQPSIKVKTGVIGIYFGPSPF*RPCLQN
Trigger: GTTCTGCAAACAAGGCCTTCAGAACGGAGAGGGCCC...GAAATATATTCCTATCACTCCTGTTTTCACTTTAATAGAAGGCTGTTGCAGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR TCA 90 bp AGAAAGCTGTCTCTACTTAGGGTTTGTCTCCCTCTGAATTTACTGACCACTCCTAGTAGAAGGGGATTCTaGAGGAGAATGGTCAGTGTT +
Preference number: 2 (lower is better)
Translates to: RKLSLLRVCLPLNLLTTPSRRGF*RRMVSV
Trigger: AACACTGACCATTCTCCTTCAGAATCCCCTTCTACT...AGGAGTGGTCAGTAAATTCAGAGGGAGACAAACCCTAAGTAGAGACAGCTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR TCA 90 bp AGAAAGCTGTCTCTACTTAGGGTTTGTCTCCCTCTGAATTTACTGACCACTCCTGAGCCTTGTGCAATGTaGAACTCTTTGGAGAAGTTG +
Preference number: 2 (lower is better)
Translates to: RKLSLLRVCLPLNLLTTPEPCAM*NSLEKL
Trigger: CAACTTCTCCAAAGAGTTTCACATTGCACAAGGCTC...AGGAGTGGTCAGTAAATTCAGAGGGAGACAAACCCTAAGTAGAGACAGCTTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR GCA 90 bp GGGAGGGTCATGTTGTTTTTAATTGCAAATACAGAAGTCAGACAAGAAGCACCACAGCCAGGACTACCCTaGAGATGGTTGTATGTGTCT +
Preference number: 2 (lower is better)
Translates to: GRVMLFLIANTEVRQEAPQPGLP*RWLYVS
Trigger: AGACACATACAACCATCTGCAGGGTAGTCCTGGCTG...TGGTGCTTCTTGTCTGACTTCTGTATTTGCAATTAAAAACAACATGACCCTCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CCA 90 bp GGGAGGGTCATGTTGTTTTTAATTGCAAATACAGAAGTCAGACAAGAAGCACCAAAAAGGTCTGCTCCTTaGCAGTGCTGTTCATGGGTC +
Preference number: 2 (lower is better)
Translates to: GRVMLFLIANTEVRQEAPKRSAP*QCCSWV
Trigger: GACCCATGAACAGCACTGCCAAGGAGCAGACCTTTT...TGGTGCTTCTTGTCTGACTTCTGTATTTGCAATTAAAAACAACATGACCCTCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CCA 90 bp AGAAAGCTGTCTCTACTTAGGGTTTGTCTCCCTCTGAATTTACTGACCACTCCTTCCTCCTCATCCTTTTaGGGACCCAATAAAAGGTCT +
Preference number: 2 (lower is better)
Translates to: RKLSLLRVCLPLNLLTTPSSSSF*GPNKRS
Trigger: AGACCTTTTATTGGGTCCCCAAAAGGATGAGGAGGA...AGGAGTGGTCAGTAAATTCAGAGGGAGACAAACCCTAAGTAGAGACAGCTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CCA 90 bp AAGATCAGACATCTGAAATCTGTGAAGCACCGGTTTCGACCTCGGGGATTCCTCGATTCTGAAGGAGAATaGTCAGTGTTTATAAGACTG +
Preference number: 2 (lower is better)
Translates to: KIRHLKSVKHRFRPRGFLDSEGE*SVFIRL
Trigger: CAGTCTTATAAACACTGACCATTCTCCTTCAGAATC...GAGGAATCCCCGAGGTCGAAACCGGTGCTTCACAGATTTCAGATGTCTGATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CCA 90 bp GTACTGCAACAGCCTTCTATTAAAGTGAAAACAGGAGTGATAGGAATATATTTCCCAGGGCAGGATTCTTaGCCACTGTGGTCTGGCTTG +
Preference number: 2 (lower is better)
Translates to: VLQQPSIKVKTGVIGIYFPGQDS*PLWSGL
Trigger: CAAGCCAGACCACAGTGGCCAAGAATCCTGCCCTGG...GAAATATATTCCTATCACTCCTGTTTTCACTTTAATAGAAGGCTGTTGCAGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CCA 90 bp GTCATCACAATCACACAGCTCAGCACCAAAGAAAGCTGTCTCTACTTAGGGTTTAATTGTGGGCTGAAGTaGGTGGCTCCATCTTTATTG +
Preference number: 2 (lower is better)
Translates to: VITITQLSTKESCLYLGFNCGLK*VAPSLL
Trigger: CAATAAAGATGGAGCCACCCACTTCAGCCCACAATT...AAACCCTAAGTAGAGACAGCTTTCTTTGGTGCTGAGCTGTGTGATTGTGATGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CCA 90 bp CTAGCATCCAAATTACTTCCTTATTGTGTTTCCTTGCTCAGTGTCAAACAATCCGACGCGGCAGCTTTCTaGACTTTTCAAGCAGGTGGA +
Preference number: 2 (lower is better)
Translates to: LASKLLPYCVSLLSVKQSDAAAF*TFQAGG
Trigger: TCCACCTGCTTGAAAAGTCCAGAAAGCTGCCGCGTC...GGATTGTTTGACACTGAGCAAGGAAACACAATAAGGAAGTAATTTGGATGCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR TCA 90 bp GTCATCACAATCACACAGCTCAGCACCAAAGAAAGCTGTCTCTACTTAGGGTTTCTTAATGCACGATTTTaGGACAATTCCCTGGCTTAC +
Preference number: 2 (lower is better)
Translates to: VITITQLSTKESCLYLGFLNARF*DNSLAY
Trigger: GTAAGCCAGGGAATTGTCTCAAAATCGTGCATTAAG...AAACCCTAAGTAGAGACAGCTTTCTTTGGTGCTGAGCTGTGTGATTGTGATGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR TCA 90 bp GGGAGGGTCATGTTGTTTTTAATTGCAAATACAGAAGTCAGACAAGAAGCACCAGGAGTGACTGTCTTCTaGTTATGCTCAATTGTGGGC +
Preference number: 2 (lower is better)
Translates to: GRVMLFLIANTEVRQEAPGVTVF*LCSIVG
Trigger: GCCCACAATTGAGCATAATCAGAAGACAGTCACTCC...TGGTGCTTCTTGTCTGACTTCTGTATTTGCAATTAAAAACAACATGACCCTCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR TCA 90 bp GTACTGCAACAGCCTTCTATTAAAGTGAAAACAGGAGTGATAGGAATATATTTCCTAGGAGATGTGCCATaGCATGCCAACAAGGCCTCC +
Preference number: 2 (lower is better)
Translates to: VLQQPSIKVKTGVIGIYFLGDVP*HANKAS
Trigger: GGAGGCCTTGTTGGCATGTCATGGCACATCTCCTAG...GAAATATATTCCTATCACTCCTGTTTTCACTTTAATAGAAGGCTGTTGCAGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR TCA 90 bp CTAGCATCCAAATTACTTCCTTATTGTGTTTCCTTGCTCAGTGTCAAACAATCCACGAGGTCAAGAGATTaGGACCATCCTGGCCAACAT +
Preference number: 2 (lower is better)
Translates to: LASKLLPYCVSLLSVKQSTRSRD*DHPGQH
Trigger: ATGTTGGCCAGGATGGTCTCAATCTCTTGACCTCGT...GGATTGTTTGACACTGAGCAAGGAAACACAATAAGGAAGTAATTTGGATGCTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR GCA 90 bp CTAGCATCCAAATTACTTCCTTATTGTGTTTCCTTGCTCAGTGTCAAACAATCCGAACTCATCATTGACTaGACCCATGGGACCACTTCC +
Preference number: 2 (lower is better)
Translates to: LASKLLPYCVSLLSVKQSELIID*THGTTS
Trigger: GGAAGTGGTCCCATGGGTGCAGTCAATGATGAGTTC...GGATTGTTTGACACTGAGCAAGGAAACACAATAAGGAAGTAATTTGGATGCTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR GCA 90 bp GTACTGCAACAGCCTTCTATTAAAGTGAAAACAGGAGTGATAGGAATATATTTCGCTGCTGGGTGGCGTTaGTTCAGTAGAAGGGGATTC +
Preference number: 2 (lower is better)
Translates to: VLQQPSIKVKTGVIGIYFAAGWR*FSRRGF
Trigger: GAATCCCCTTCTACTGAAGCAACGCCACCCAGCAGC...GAAATATATTCCTATCACTCCTGTTTTCACTTTAATAGAAGGCTGTTGCAGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR GCA 90 bp CTAGCATCCAAATTACTTCCTTATTGTGTTTCCTTGCTCAGTGTCAAACAATCCCAGCCAGGACTACCCTaGAGATGGTTGTATGTGTCT +
Preference number: 2 (lower is better)
Translates to: LASKLLPYCVSLLSVKQSQPGLP*RWLYVS
Trigger: AGACACATACAACCATCTGCAGGGTAGTCCTGGCTG...GGATTGTTTGACACTGAGCAAGGAAACACAATAAGGAAGTAATTTGGATGCTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CCA 90 bp AGAAAGCTGTCTCTACTTAGGGTTTGTCTCCCTCTGAATTTACTGACCACTCCTCATTCTTTCAGGCGTTaGTCATCTAGCTACAACCTA +
Preference number: 2 (lower is better)
Translates to: RKLSLLRVCLPLNLLTTPHSFRR*SSSYNL
Trigger: TAGGTTGTAGCTAGATGACCAACGCCTGAAAGAATG...AGGAGTGGTCAGTAAATTCAGAGGGAGACAAACCCTAAGTAGAGACAGCTTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CCA 90 bp TTTGGGAGTGACTGTCTTCTGATTATGCTCAATTGTGGGCTGAAGTGGGTGGCTGATTCTGAAGGAGAATaGTCAGTGTTTATAAGACTG +
Preference number: 2 (lower is better)
Translates to: FGSDCLLIMLNCGLKWVADSEGE*SVFIRL
Trigger: CAGTCTTATAAACACTGACCATTCTCCTTCAGAATC...AGCCACCCACTTCAGCCCACAATTGAGCATAATCAGAAGACAGTCACTCCCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CCA 90 bp CTAGCATCCAAATTACTTCCTTATTGTGTTTCCTTGCTCAGTGTCAAACAATCCGCACTGAGTCTGTTTTaGGCACCTTGCTTTGGGAAG +
Preference number: 2 (lower is better)
Translates to: LASKLLPYCVSLLSVKQSALSLF*APCFGK
Trigger: CTTCCCAAAGCAAGGTGCCCAAAACAGACTCAGTGC...GGATTGTTTGACACTGAGCAAGGAAACACAATAAGGAAGTAATTTGGATGCTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR TCA 90 bp CTAGCATCCAAATTACTTCCTTATTGTGTTTCCTTGCTCAGTGTCAAACAATCCGGAGTGACTGTCTTCTaGTTATGCTCAATTGTGGGC +
Preference number: 2 (lower is better)
Translates to: LASKLLPYCVSLLSVKQSGVTVF*LCSIVG
Trigger: GCCCACAATTGAGCATAATCAGAAGACAGTCACTCC...GGATTGTTTGACACTGAGCAAGGAAACACAATAAGGAAGTAATTTGGATGCTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR TCA 90 bp GGGAGGGTCATGTTGTTTTTAATTGCAAATACAGAAGTCAGACAAGAAGCACCAGAGCCTTGTGCAATGTaGAACTCTTTGGAGAAGTTG +
Preference number: 2 (lower is better)
Translates to: GRVMLFLIANTEVRQEAPEPCAM*NSLEKL
Trigger: CAACTTCTCCAAAGAGTTTCACATTGCACAAGGCTC...TGGTGCTTCTTGTCTGACTTCTGTATTTGCAATTAAAAACAACATGACCCTCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR TCA 90 bp GGGAGGGTCATGTTGTTTTTAATTGCAAATACAGAAGTCAGACAAGAAGCACCAAGAATGCACAGATCATaGTCATCCACTGGGGAAAGA +
Preference number: 2 (lower is better)
Translates to: GRVMLFLIANTEVRQEAPRMHRS*SSTGER
Trigger: TCTTTCCCCAGTGGATGATCATGATCTGTGCATTCT...TGGTGCTTCTTGTCTGACTTCTGTATTTGCAATTAAAAACAACATGACCCTCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR GCA 90 bp AGAAAGCTGTCTCTACTTAGGGTTTGTCTCCCTCTGAATTTACTGACCACTCCTTCCAAAAGAGCCTTGTaGAATGTGAAACTCTTTGGA +
Preference number: 2 (lower is better)
Translates to: RKLSLLRVCLPLNLLTTPSKRAL*NVKLFG
Trigger: TCCAAAGAGTTTCACATTGCACAAGGCTCTTTTGGA...AGGAGTGGTCAGTAAATTCAGAGGGAGACAAACCCTAAGTAGAGACAGCTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CCA 90 bp GTACTGCAACAGCCTTCTATTAAAGTGAAAACAGGAGTGATAGGAATATATTTCAACAGGCTCCAGTTTTaGCAAGACCTGCCTGTCCTG +
Preference number: 2 (lower is better)
Translates to: VLQQPSIKVKTGVIGIYFNRLQF*QDLPVL
Trigger: CAGGACAGGCAGGTCTTGCCAAAACTGGAGCCTGTT...GAAATATATTCCTATCACTCCTGTTTTCACTTTAATAGAAGGCTGTTGCAGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR TCA 90 bp GGGAGGGTCATGTTGTTTTTAATTGCAAATACAGAAGTCAGACAAGAAGCACCACTTAATGCACGATTTTaGGACAATTCCCTGGCTTAC +
Preference number: 2 (lower is better)
Translates to: GRVMLFLIANTEVRQEAPLNARF*DNSLAY
Trigger: GTAAGCCAGGGAATTGTCTCAAAATCGTGCATTAAG...TGGTGCTTCTTGTCTGACTTCTGTATTTGCAATTAAAAACAACATGACCCTCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR TCA 90 bp GTACTGCAACAGCCTTCTATTAAAGTGAAAACAGGAGTGATAGGAATATATTTCACGAGGTCAAGAGATTaGGACCATCCTGGCCAACAT +
Preference number: 2 (lower is better)
Translates to: VLQQPSIKVKTGVIGIYFTRSRD*DHPGQH
Trigger: ATGTTGGCCAGGATGGTCTCAATCTCTTGACCTCGT...GAAATATATTCCTATCACTCCTGTTTTCACTTTAATAGAAGGCTGTTGCAGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR GCA 90 bp GTACTGCAACAGCCTTCTATTAAAGTGAAAACAGGAGTGATAGGAATATATTTCGAACTCATCATTGACTaGACCCATGGGACCACTTCC +
Preference number: 2 (lower is better)
Translates to: VLQQPSIKVKTGVIGIYFELIID*THGTTS
Trigger: GGAAGTGGTCCCATGGGTGCAGTCAATGATGAGTTC...GAAATATATTCCTATCACTCCTGTTTTCACTTTAATAGAAGGCTGTTGCAGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CCA 90 bp GTACTGCAACAGCCTTCTATTAAAGTGAAAACAGGAGTGATAGGAATATATTTCTGCAGTGCACATGACTaGCATGACAGAGATGCTGTG +
Preference number: 2 (lower is better)
Translates to: VLQQPSIKVKTGVIGIYFCSAHD*HDRDAV
Trigger: CACAGCATCTCTGTCATGCCAGTCATGTGCACTGCA...GAAATATATTCCTATCACTCCTGTTTTCACTTTAATAGAAGGCTGTTGCAGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CCA 90 bp GTACTGCAACAGCCTTCTATTAAAGTGAAAACAGGAGTGATAGGAATATATTTCTTTACCCTATCAGGCTaGGAAGTCCCTGAAGGGAGA +
Preference number: 2 (lower is better)
Translates to: VLQQPSIKVKTGVIGIYFFTLSG*EVPEGR
Trigger: TCTCCCTTCAGGGACTTCCCAGCCTGATAGGGTAAA...GAAATATATTCCTATCACTCCTGTTTTCACTTTAATAGAAGGCTGTTGCAGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CCA 90 bp CTAGCATCCAAATTACTTCCTTATTGTGTTTCCTTGCTCAGTGTCAAACAATCCAATTGTGGGCTGAAGTaGGTGGCTCCATCTTTATTG +
Preference number: 2 (lower is better)
Translates to: LASKLLPYCVSLLSVKQSNCGLK*VAPSLL
Trigger: CAATAAAGATGGAGCCACCCACTTCAGCCCACAATT...GGATTGTTTGACACTGAGCAAGGAAACACAATAAGGAAGTAATTTGGATGCTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CCA 90 bp GTACTGCAACAGCCTTCTATTAAAGTGAAAACAGGAGTGATAGGAATATATTTCTTTGAGACAATTCCCTaGCTTACAGACCAGGTCCAA +
Preference number: 2 (lower is better)
Translates to: VLQQPSIKVKTGVIGIYFFETIP*LTDQVQ
Trigger: TTGGACCTGGTCTGTAAGCCAGGGAATTGTCTCAAA...GAAATATATTCCTATCACTCCTGTTTTCACTTTAATAGAAGGCTGTTGCAGTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CCA 90 bp GTACTGCAACAGCCTTCTATTAAAGTGAAAACAGGAGTGATAGGAATATATTTCAATTGTGGGCTGAAGTaGGTGGCTCCATCTTTATTG +
Preference number: 2 (lower is better)
Translates to: VLQQPSIKVKTGVIGIYFNCGLK*VAPSLL
Trigger: CAATAAAGATGGAGCCACCCACTTCAGCCCACAATT...GAAATATATTCCTATCACTCCTGTTTTCACTTTAATAGAAGGCTGTTGCAGTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR CCA 72 bp CAGCCCACTCCAGGACACTCCCTGCCAGCCCCGGAGTaGACCAGGCTGCAGAACCCCACATCCCTGTCCCGG +
Preference number: 3 (lower is better)
Translates to: QPTPGHSLPAPE*TRLQNPTSLSR
Trigger: CCGGGACAGGGATGTGGGGTTCTGCAGCCTGGTCCACTCCGGGGCTGGCAGGGAGTGTCCTGGAGTGGGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR CCA 72 bp AAGGCGGGACCCCCACCCTCCCGAGTTGAGCCTACTTaGGGCCAACCTACGCTGGGTCTCCTGGTCCCTCTC +
Preference number: 3 (lower is better)
Translates to: KAGPPPSRVEPT*GQPTLGLLVPL
Trigger: GAGAGGGACCAGGAGACCCAGCGTAGGTTGGCCCCAAGTAGGCTCAACTCGGGAGGGTGGGGGTCCCGCCTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR CCA 72 bp GGGAAGTGGAGGCCCTGTGGAGGCCGTCCTCAACCCTaGCCGCCGACAGCCAACACAGCAGCTAGGAGGAAC +
Preference number: 3 (lower is better)
Translates to: GKWRPCGGRPQP*PPTANTAARRN
Trigger: GTTCCTCCTAGCTGCTGTGTTGGCTGTCGGCGGCCAGGGTTGAGGACGGCCTCCACAGGGCCTCCACTTCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CAA 90 bp CTCCTGGTCACTGCCCTCCTGGCTCCAGCAGAGGTCATGCCCCTTCTCGGTCCTCCTGGCTTGGGTGGCTaGGGCGAGTCCTGTTCAGCC +
Preference number: 3 (lower is better)
Translates to: LLVTALLAPAEVMPLLGPPGLGG*GESCSA
Trigger: GGCTGAACAGGACTCGCCCAAGCCACCCAAGCCAGG...AGGACCGAGAAGGGGCATGACCTCTGCTGGAGCCAGGAGGGCAGTGACCAGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CAA 90 bp GAGGCCGTCCTCAACCCTGGCCGCCGACAGCCAACACAGCAGCTAGGAGGAACACCTGGCTTGGGTGGCTaGGGCGAGTCCTGTTCAGCC +
Preference number: 3 (lower is better)
Translates to: EAVLNPGRRQPTQQLGGTPGLGG*GESCSA
Trigger: GGCTGAACAGGACTCGCCCAAGCCACCCAAGCCAGG...TGTTCCTCCTAGCTGCTGTGTTGGCTGTCGGCGGCCAGGGTTGAGGACGGCCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR TCA 72 bp TTGCCTCCCACAGGCGGGCGATGGTCTCACCTAGCGTaGCCCTCAGGTGCCTCTGCTGAGCTGCCACAGGGT +
Preference number: 3 (lower is better)
Translates to: LPPTGGRWSHLA*PSGASAELPQG
Trigger: ACCCTGTGGCAGCTCAGCAGAGGCACCTGAGGGTCACGCTAGGTGAGACCATCGCCCGCCTGTGGGAGGCAA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR GCA 72 bp CGTGCTCGGGGCCCAGGCCCTCTGATTGAGAAACACTaGCCCATGCCGGCCACCCAAGAGGTCACCCACATG +
Preference number: 3 (lower is better)
Translates to: RARGPGPLIEKH*PMPATQEVTHM
Trigger: CATGTGGGTGACCTCTTGGGTGGCCGGCATGGGGCAGTGTTTCTCAATCAGAGGGCCTGGGCCCCGAGCACG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR TCA 72 bp TGCGAAGAGAAAGGCGGGACCCCCACCCTCCCGAGTTaGGCCTACTTGGGGCCAACCTACGCTGGGTCTCCT +
Preference number: 3 (lower is better)
Translates to: CEEKGGTPTLPS*AYLGPTYAGSP
Trigger: AGGAGACCCAGCGTAGGTTGGCCCCAAGTAGGCTCAACTCGGGAGGGTGGGGGTCCCGCCTTTCTCTTCGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR TCA 72 bp CTCAGATTCCTGGACGTGCTCGGGGCCCAGGCCCTCTaGTTGAGAAACACTGCCCCATGCCGGCCACCCAAG +
Preference number: 3 (lower is better)
Translates to: LRFLDVLGAQAL*LRNTAPCRPPK
Trigger: CTTGGGTGGCCGGCATGGGGCAGTGTTTCTCAATCAGAGGGCCTGGGCCCCGAGCACGTCCAGGAATCTGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CAA 90 bp CTGATTGAGAAACACTGCCCCATGCCGGCCACCCAAGAGGTCACCCACATGCCACCTGGCTTGGGTGGCTaGGGCGAGTCCTGTTCAGCC +
Preference number: 3 (lower is better)
Translates to: LIEKHCPMPATQEVTHMPPGLGG*GESCSA
Trigger: GGCTGAACAGGACTCGCCCAAGCCACCCAAGCCAGG...TGGCATGTGGGTGACCTCTTGGGTGGCCGGCATGGGGCAGTGTTTCTCAATCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CAA 90 bp CTCCTGGTCACTGCCCTCCTGGCTCCAGCAGAGGTCATGCCCCTTCTCGGTCCTGTTTACCCACTTATCTaGCCTCCCACAGGCGGGCGA +
Preference number: 3 (lower is better)
Translates to: LLVTALLAPAEVMPLLGPVYPLI*PPTGGR
Trigger: TCGCCCGCCTGTGGGAGGCAAGATAAGTGGGTAAAC...AGGACCGAGAAGGGGCATGACCTCTGCTGGAGCCAGGAGGGCAGTGACCAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR GCA 72 bp CTGCTTCCCTTCAGTGCTAAGCCAGCTCCTGGTCACTaGCCTCCTGGCTCCAGCAGAGGTCATGCCCCTTCT +
Preference number: 3 (lower is better)
Translates to: LLPFSAKPAPGH*PPGSSRGHAPS
Trigger: AGAAGGGGCATGACCTCTGCTGGAGCCAGGAGGGCAGTGACCAGGAGCTGGCTTAGCACTGAAGGGAAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CAA 90 bp CTCCTGGTCACTGCCCTCCTGGCTCCAGCAGAGGTCATGCCCCTTCTCGGTCCTTCTGTCTCTGGGCCCTaGCTTGGCTGTTTCCATGAA +
Preference number: 3 (lower is better)
Translates to: LLVTALLAPAEVMPLLGPSVSGP*LGCFHE
Trigger: TTCATGGAAACAGCCAAGCAAGGGCCCAGAGACAGA...AGGACCGAGAAGGGGCATGACCTCTGCTGGAGCCAGGAGGGCAGTGACCAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CAA 90 bp GCTCAATTGTGGGCTGAAGTGGGTGGCTCCATCTTTATTGCAAAGGCCGGGCCACCTGGCTTGGGTGGCTaGGGCGAGTCCTGTTCAGCC +
Preference number: 3 (lower is better)
Translates to: AQLWAEVGGSIFIAKAGPPGLGG*GESCSA
Trigger: GGCTGAACAGGACTCGCCCAAGCCACCCAAGCCAGG...TGGCCCGGCCTTTGCAATAAAGATGGAGCCACCCACTTCAGCCCACAATTGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CAA 90 bp CTCCTGGTCACTGCCCTCCTGGCTCCAGCAGAGGTCATGCCCCTTCTCGGTCCTTCCTGGTCCCTCTCCTaGGTGGCAGAAATAGGTTTC +
Preference number: 3 (lower is better)
Translates to: LLVTALLAPAEVMPLLGPSWSLS*VAEIGF
Trigger: GAAACCTATTTCTGCCACCAAGGAGAGGGACCAGGA...AGGACCGAGAAGGGGCATGACCTCTGCTGGAGCCAGGAGGGCAGTGACCAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CAA 90 bp GAGGCCGTCCTCAACCCTGGCCGCCGACAGCCAACACAGCAGCTAGGAGGAACATCCTGGTCCCTCTCCTaGGTGGCAGAAATAGGTTTC +
Preference number: 3 (lower is better)
Translates to: EAVLNPGRRQPTQQLGGTSWSLS*VAEIGF
Trigger: GAAACCTATTTCTGCCACCAAGGAGAGGGACCAGGA...TGTTCCTCCTAGCTGCTGTGTTGGCTGTCGGCGGCCAGGGTTGAGGACGGCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR TCA 72 bp CGGCCACCCAAGAGGTCACCCACATGCCAGGTACTGTaGGTGCACTTGGGGCACAAGTGCGAAGAGAAAGGC +
Preference number: 3 (lower is better)
Translates to: RPPKRSPTCQVL*VHLGHKCEEKG
Trigger: GCCTTTCTCTTCGCACTTGTGCCCCAAGTGCACTCACAGTACCTGGCATGTGGGTGACCTCTTGGGTGGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR CCA 72 bp GGCTCCATCTTTATTGCAAAGGCCGGGCCATGGGGTTaGCAGCAGCTGGAGGAGATGCTTCTTCCCCTGTCC +
Preference number: 3 (lower is better)
Translates to: GSIFIAKAGPWG*QQLEEMLLPLS
Trigger: GGACAGGGGAAGAAGCATCTCCTCCAGCTGCTGCCAACCCCATGGCCCGGCCTTTGCAATAAAGATGGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR CCA 72 bp GTGGGTGGCTCCATCTTTATTGCAAAGGCCGGGCCATaGGGTTGGCAGCAGCTGGAGGAGATGCTTCTTCCC +
Preference number: 3 (lower is better)
Translates to: VGGSIFIAKAGP*GWQQLEEMLLP
Trigger: GGGAAGAAGCATCTCCTCCAGCTGCTGCCAACCCCATGGCCCGGCCTTTGCAATAAAGATGGAGCCACCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR CCA 72 bp CCTCCCGAGTTGAGCCTACTTGGGGCCAACCTACGCTaGGTCTCCTGGTCCCTCTCCTTGGTGGCAGAAATA +
Preference number: 3 (lower is better)
Translates to: PPELSLLGANLR*VSWSLSLVAEI
Trigger: TATTTCTGCCACCAAGGAGAGGGACCAGGAGACCCAGCGTAGGTTGGCCCCAAGTAGGCTCAACTCGGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR CCA 72 bp AGAGGTCACCCACATGCCAGGTACTGTGAGTGCACTTaGGGCACAAGTGCGAAGAGAAAGGCGGGACCCCCA +
Preference number: 3 (lower is better)
Translates to: RGHPHARYCECT*GTSAKRKAGPP
Trigger: TGGGGGTCCCGCCTTTCTCTTCGCACTTGTGCCCCAAGTGCACTCACAGTACCTGGCATGTGGGTGACCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CAA 90 bp GCCAGGTACTGTGAGTGCACTTGGGGCACAAGTGCGAAGAGAAAGGCGGGACCCCTACCCTGCAGATGGTaGTATGTGTCTGAGAGGTGG +
Preference number: 3 (lower is better)
Translates to: ARYCECTWGTSAKRKAGPLPCRW*YVSERW
Trigger: CCACCTCTCAGACACATACAACCATCTGCAGGGTAG...GGGTCCCGCCTTTCTCTTCGCACTTGTGCCCCAAGTGCACTCACAGTACCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CAA 90 bp AAGATCAGACATCTGAAATCTGTGAAGCACCGGTTTCGACCTCGGGGATTCCTCGGCCGGGCCATGGGGTaGGCAGCAGCTGGAGGAGAT +
Preference number: 3 (lower is better)
Translates to: KIRHLKSVKHRFRPRGFLGRAMG*AAAGGD
Trigger: ATCTCCTCCAGCTGCTGCCAACCCCATGGCCCGGCC...GAGGAATCCCCGAGGTCGAAACCGGTGCTTCACAGATTTCAGATGTCTGATCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR TCA 72 bp TCTGCTGAGCTGCCACAGGGTCCTGAATGTGTCCATTaGGGGCATCGGGGGCCTCAGATCCGAGTAAACCCT +
Preference number: 3 (lower is better)
Translates to: SAELPQGPECVH*GHRGPQIRVNP
Trigger: AGGGTTTACTCGGATCTGAGGCCCCCGATGCCCTCAATGGACACATTCAGGACCCTGTGGCAGCTCAGCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR TCA 72 bp TGCCACCGTGTTGAACACACTGGGGCAGGCTGTGGTTaGCAGCTGCAGGCTTCTGCCAGCCTAGCATCCAAA +
Preference number: 3 (lower is better)
Translates to: CHRVEHTGAGCG*QLQASASLASK
Trigger: TTTGGATGCTAGGCTGGCAGAAGCCTGCAGCTGTCAACCACAGCCTGCCCCAGTGTGTTCAACACGGTGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR CCA 72 bp CCCAATAAAAGGTCTGCTCCTTGGCAGTGCTGTTCATaGGTCCCCAGCAGAGTGAGACCCTCCCTCTGCTGC +
Preference number: 3 (lower is better)
Translates to: PNKRSAPWQCCS*VPSRVRPSLCC
Trigger: GCAGCAGAGGGAGGGTCTCACTCTGCTGGGGACCCATGAACAGCACTGCCAAGGAGCAGACCTTTTATTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR CCA 72 bp AAGGCCTCCTTGAGCCAGGGAGACGCGGCAGCTTTCTaGACTTTTCAAGCAGGTGGAGCAGGTGGAGTGACT +
Preference number: 3 (lower is better)
Translates to: KASLSQGDAAAF*TFQAGGAGGVT
Trigger: AGTCACTCCACCTGCTCCACCTGCTTGAAAAGTCCAGAAAGCTGCCGCGTCTCCCTGGCTCAAGGAGGCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CAA 90 bp GCCAGGTACTGTGAGTGCACTTGGGGCACAAGTGCGAAGAGAAAGGCGGGACCCTCCATGAACTCATCATaGACTGCACCCATGGGACCA +
Preference number: 3 (lower is better)
Translates to: ARYCECTWGTSAKRKAGPSMNSS*TAPMGP
Trigger: TGGTCCCATGGGTGCAGTCAATGATGAGTTCATGGA...GGGTCCCGCCTTTCTCTTCGCACTTGTGCCCCAAGTGCACTCACAGTACCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CAA 90 bp GGAAAGAGTAAGCTCACTTTAACTCAGATTCCTGGACGTGCTCGGGGCCCAGGCGTGGCTCCATCTTTATaGCAAAGGCCGGGCCATGGG +
Preference number: 3 (lower is better)
Translates to: GKSKLTLTQIPGRARGPGVAPSL*QRPGHG
Trigger: CCCATGGCCCGGCCTTTGCAATAAAGATGGAGCCAC...GCCTGGGCCCCGAGCACGTCCAGGAATCTGAGTTAAAGTGAGCTTACTCTTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CAA 90 bp AAGCCATATGCACATCTGCCCCACTTCCCTAAAGCACTGAGTCTGTTTTGGGCAGCCAACAAGGCCTCCTaGAGCCAGGGAGACGCGGCA +
Preference number: 3 (lower is better)
Translates to: KPYAHLPHFPKALSLFWAANKAS*SQGDAA
Trigger: TGCCGCGTCTCCCTGGCTCAAGGAGGCCTTGTTGGC...TGCCCAAAACAGACTCAGTGCTTTAGGGAAGTGGGGCAGATGTGCATATGGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CAA 90 bp AGAAAGCTGTCTCTACTTAGGGTTTGTCTCCCTCTGAATTTACTGACCACTCCTGGCCGGGCCATGGGGTaGGCAGCAGCTGGAGGAGAT +
Preference number: 3 (lower is better)
Translates to: RKLSLLRVCLPLNLLTTPGRAMG*AAAGGD
Trigger: ATCTCCTCCAGCTGCTGCCAACCCCATGGCCCGGCC...AGGAGTGGTCAGTAAATTCAGAGGGAGACAAACCCTAAGTAGAGACAGCTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR GCA 72 bp GCACACACTGCTTCTTCACACACAGGCCACTACGCATaGAGTGCACATGACTGGCATGACAGAGATGCTGTG +
Preference number: 3 (lower is better)
Translates to: AHTASSHTGHYA*SAHDWHDRDAV
Trigger: CACAGCATCTCTGTCATGCCAGTCATGTGCACTGCATGCGTAGTGGCCTGTGTGTGAAGAAGCAGTGTGTGC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR CCA 72 bp CATGCAGTGCACATGACTGGCATGACAGAGATGCTGTaGGCCCTCTCCGTTCTGAAGGCCTTGTTTGCAGAA +
Preference number: 3 (lower is better)
Translates to: HAVHMTGMTEML*ALSVLKALFAE
Trigger: TTCTGCAAACAAGGCCTTCAGAACGGAGAGGGCCCACAGCATCTCTGTCATGCCAGTCATGTGCACTGCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CAA 90 bp GCTTCCAAAAGAGCCTTGTGCAATGTGAAACTCTTTGGAGAAGTTGCTGAAGAAGGCCGGGCCATGGGGTaGGCAGCAGCTGGAGGAGAT +
Preference number: 3 (lower is better)
Translates to: ASKRALCNVKLFGEVAEEGRAMG*AAAGGD
Trigger: ATCTCCTCCAGCTGCTGCCAACCCCATGGCCCGGCC...TTCTTCAGCAACTTCTCCAAAGAGTTTCACATTGCACAAGGCTCTTTTGGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CAA 90 bp AAGCCATATGCACATCTGCCCCACTTCCCTAAAGCACTGAGTCTGTTTTGGGCAGTGGCTCCATCTTTATaGCAAAGGCCGGGCCATGGG +
Preference number: 3 (lower is better)
Translates to: KPYAHLPHFPKALSLFWAVAPSL*QRPGHG
Trigger: CCCATGGCCCGGCCTTTGCAATAAAGATGGAGCCAC...TGCCCAAAACAGACTCAGTGCTTTAGGGAAGTGGGGCAGATGTGCATATGGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR TCA 72 bp CTTTCTGGACTTTTCAAGCAGGTGGAGCAGGTGGAGTaGCTATGTGAAGAGGAATGGAGGGAAGTGGAGGCC +
Preference number: 3 (lower is better)
Translates to: LSGLFKQVEQVE*LCEEEWREVEA
Trigger: GGCCTCCACTTCCCTCCATTCCTCTTCACATAGTCACTCCACCTGCTCCACCTGCTTGAAAAGTCCAGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR TCA 72 bp CTCATTATGAAGTCAGGGAGAACAATGCCACCGTGTTaGACACACTGGGGCAGGCTGTGGTTGACAGCTGCA +
Preference number: 3 (lower is better)
Translates to: LIMKSGRTMPPC*THWGRLWLTAA
Trigger: TGCAGCTGTCAACCACAGCCTGCCCCAGTGTGTTCAACACGGTGGCATTGTTCTCCCTGACTTCATAATGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR GCA 72 bp CTGCAGACAGGCACGAGCTTTCTGTCTCTGGGCCCTTaGTTGGCTGTTTCCATGAACTCATCATTGACTGCA +
Preference number: 3 (lower is better)
Translates to: LQTGTSFLSLGP*LAVSMNSSLTA
Trigger: TGCAGTCAATGATGAGTTCATGGAAACAGCCAAGCAAGGGCCCAGAGACAGAAAGCTCGTGCCTGTCTGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR GCA 72 bp CACTGGGGCAGGCTGTGGTTGACAGCTGCAGGCTTCTaGCAGCCTAGCATCCAAATTACTTCCTTATTGTGT +
Preference number: 3 (lower is better)
Translates to: HWGRLWLTAAGF*QPSIQITSLLC
Trigger: ACACAATAAGGAAGTAATTTGGATGCTAGGCTGGCAGAAGCCTGCAGCTGTCAACCACAGCCTGCCCCAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR CCA 72 bp CCTCTTCTTTGTAGTGTCTTATTTACCCTATCAGGCTaGGAAGTCCCTGAAGGGAGACTCCCCATGCTCCCC +
Preference number: 3 (lower is better)
Translates to: PLLCSVLFTLSG*EVPEGRLPMLP
Trigger: GGGGAGCATGGGGAGTCTCCCTTCAGGGACTTCCCAGCCTGATAGGGTAAATAAGACACTACAAAGAAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CAA 90 bp AGAAAGCTGTCTCTACTTAGGGTTTGTCTCCCTCTGAATTTACTGACCACTCCTTTCTCTGTCCCTGGCTaGGGTGGCTTGGGCGAGTCC +
Preference number: 3 (lower is better)
Translates to: RKLSLLRVCLPLNLLTTPFSVPG*GGLGES
Trigger: GGACTCGCCCAAGCCACCCAAGCCAGGGACAGAGAA...AGGAGTGGTCAGTAAATTCAGAGGGAGACAAACCCTAAGTAGAGACAGCTTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CAA 90 bp ATGAACTCATCATTGACTGCACCCATGGGACCACTTCCTCCTCATCCTTTTGGGTCCGTTCTGAAGGCCTaGTTTGCAGAACAGCAGGAG +
Preference number: 3 (lower is better)
Translates to: MNSSLTAPMGPLPPHPFGSVLKA*FAEQQE
Trigger: CTCCTGCTGTTCTGCAAACAAGGCCTTCAGAACGGA...CCCAAAAGGATGAGGAGGAAGTGGTCCCATGGGTGCAGTCAATGATGAGTTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CAA 90 bp GCTTCCAAAAGAGCCTTGTGCAATGTGAAACTCTTTGGAGAAGTTGCTGAAGAATTCTCTGTCCCTGGCTaGGGTGGCTTGGGCGAGTCC +
Preference number: 3 (lower is better)
Translates to: ASKRALCNVKLFGEVAEEFSVPG*GGLGES
Trigger: GGACTCGCCCAAGCCACCCAAGCCAGGGACAGAGAA...TTCTTCAGCAACTTCTCCAAAGAGTTTCACATTGCACAAGGCTCTTTTGGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CAA 90 bp AAGATCAGACATCTGAAATCTGTGAAGCACCGGTTTCGACCTCGGGGATTCCTCTCCTGGTCCCTCTCCTaGGTGGCAGAAATAGGTTTC +
Preference number: 3 (lower is better)
Translates to: KIRHLKSVKHRFRPRGFLSWSLS*VAEIGF
Trigger: GAAACCTATTTCTGCCACCAAGGAGAGGGACCAGGA...GAGGAATCCCCGAGGTCGAAACCGGTGCTTCACAGATTTCAGATGTCTGATCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR TCA 72 bp CAGATCTTGAACCCAAAACATCTAGGAGATGTGCCATaGCATGCCAACAAGGCCTCCTTGAGCCAGGGAGAC +
Preference number: 3 (lower is better)
Translates to: QILNPKHLGDVP*HANKASLSQGD
Trigger: GTCTCCCTGGCTCAAGGAGGCCTTGTTGGCATGTCATGGCACATCTCCTAGATGTTTTGGGTTCAAGATCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR GCA 72 bp TCCCTTGGCACTCTCTGGAAAGTTCCACTGGGACACTaGCCAGACCTCGCATTAGACAGGAATGATGTTTAC +
Preference number: 3 (lower is better)
Translates to: SLGTLWKVPLGH*PDLALDRNDVY
Trigger: GTAAACATCATTCCTGTCTAATGCGAGGTCTGGGCAGTGTCCCAGTGGAACTTTCCAGAGAGTGCCAAGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CAA 90 bp CATCTGAAATCTGTGAAGCACCGGTTTCGACCTCGGGGATTCCTCAGAAGAAGTTCTGATTATGCTCAATaGTGGGCTGAAGTGGGTGGC +
Preference number: 3 (lower is better)
Translates to: HLKSVKHRFRPRGFLRRSSDYAQ*WAEVGG
Trigger: GCCACCCACTTCAGCCCACAATTGAGCATAATCAGA...ACTTCTTCTGAGGAATCCCCGAGGTCGAAACCGGTGCTTCACAGATTTCAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CAA 90 bp AAGATCAGACATCTGAAATCTGTGAAGCACCGGTTTCGACCTCGGGGATTCCTCTCTGATTATGCTCAATaGTGGGCTGAAGTGGGTGGC +
Preference number: 3 (lower is better)
Translates to: KIRHLKSVKHRFRPRGFLSDYAQ*WAEVGG
Trigger: GCCACCCACTTCAGCCCACAATTGAGCATAATCAGA...GAGGAATCCCCGAGGTCGAAACCGGTGCTTCACAGATTTCAGATGTCTGATCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR CCA 72 bp GACTGTCTTCTGATTATGCTCAATTGTGGGCTGAAGTaGGTGGCTCCATCTTTATTGCAAAGGCCGGGCCAT +
Preference number: 3 (lower is better)
Translates to: DCLLIMLNCGLK*VAPSLLQRPGH
Trigger: ATGGCCCGGCCTTTGCAATAAAGATGGAGCCACCCACTTCAGCCCACAATTGAGCATAATCAGAAGACAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CAA 90 bp GCTTCCAAAAGAGCCTTGTGCAATGTGAAACTCTTTGGAGAAGTTGCTGAAGAAGTGGCTCCATCTTTATaGCAAAGGCCGGGCCATGGG +
Preference number: 3 (lower is better)
Translates to: ASKRALCNVKLFGEVAEEVAPSL*QRPGHG
Trigger: CCCATGGCCCGGCCTTTGCAATAAAGATGGAGCCAC...TTCTTCAGCAACTTCTCCAAAGAGTTTCACATTGCACAAGGCTCTTTTGGAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CAA 90 bp TTGGTGGCAGAAATAGGTTTCCAACAGGCTCCAGTTTTGGCAAGACCTGCCTGTATGAAGATGCCCTCATaGAATCCACTGTGCTTCCAG +
Preference number: 3 (lower is better)
Translates to: LVAEIGFQQAPVLARPACMKMPS*NPLCFQ
Trigger: CTGGAAGCACAGTGGATTCAATGAGGGCATCTTCAT...ACAGGCAGGTCTTGCCAAAACTGGAGCCTGTTGGAAACCTATTTCTGCCACCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CAA 90 bp CATCTGAAATCTGTGAAGCACCGGTTTCGACCTCGGGGATTCCTCAGAAGAAGTATGAAGATGCCCTCATaGAATCCACTGTGCTTCCAG +
Preference number: 3 (lower is better)
Translates to: HLKSVKHRFRPRGFLRRSMKMPS*NPLCFQ
Trigger: CTGGAAGCACAGTGGATTCAATGAGGGCATCTTCAT...ACTTCTTCTGAGGAATCCCCGAGGTCGAAACCGGTGCTTCACAGATTTCAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CAA 90 bp GGAAAGAGTAAGCTCACTTTAACTCAGATTCCTGGACGTGCTCGGGGCCCAGGCAACTCTTTGGAGAAGTaGCTGAAGAAGAGCTATGAA +
Preference number: 3 (lower is better)
Translates to: GKSKLTLTQIPGRARGPGNSLEK*LKKSYE
Trigger: TTCATAGCTCTTCTTCAGCAACTTCTCCAAAGAGTT...GCCTGGGCCCCGAGCACGTCCAGGAATCTGAGTTAAAGTGAGCTTACTCTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR TCA 72 bp GCTGCTGGGTGGCGTTGCTTCAGTAGAAGGGGATTCTaGAGGAGAATGGTCAGTGTTTATAAGACTGAAGCT +
Preference number: 3 (lower is better)
Translates to: AAGWRCFSRRGF*RRMVSVYKTEA
Trigger: AGCTTCAGTCTTATAAACACTGACCATTCTCCTTCAGAATCCCCTTCTACTGAAGCAACGCCACCCAGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CAA 90 bp GTCATCACAATCACACAGCTCAGCACCAAAGAAAGCTGTCTCTACTTAGGGTTTTCCGTTCTGAAGGCCTaGTTTGCAGAACAGCAGGAG +
Preference number: 3 (lower is better)
Translates to: VITITQLSTKESCLYLGFSVLKA*FAEQQE
Trigger: CTCCTGCTGTTCTGCAAACAAGGCCTTCAGAACGGA...AAACCCTAAGTAGAGACAGCTTTCTTTGGTGCTGAGCTGTGTGATTGTGATGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CAA 90 bp AGAAAGCTGTCTCTACTTAGGGTTTGTCTCCCTCTGAATTTACTGACCACTCCTTCCGTTCTGAAGGCCTaGTTTGCAGAACAGCAGGAG +
Preference number: 3 (lower is better)
Translates to: RKLSLLRVCLPLNLLTTPSVLKA*FAEQQE
Trigger: CTCCTGCTGTTCTGCAAACAAGGCCTTCAGAACGGA...AGGAGTGGTCAGTAAATTCAGAGGGAGACAAACCCTAAGTAGAGACAGCTTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CAA 90 bp GTACTGCAACAGCCTTCTATTAAAGTGAAAACAGGAGTGATAGGAATATATTTCCCCCACCCTCCCGAGTaGAGCCTACTTGGGGCCAAC +
Preference number: 3 (lower is better)
Translates to: VLQQPSIKVKTGVIGIYFPHPPE*SLLGAN
Trigger: GTTGGCCCCAAGTAGGCTCAACTCGGGAGGGTGGGG...GAAATATATTCCTATCACTCCTGTTTTCACTTTAATAGAAGGCTGTTGCAGTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CAA 90 bp GCTTCCAAAAGAGCCTTGTGCAATGTGAAACTCTTTGGAGAAGTTGCTGAAGAACTACCCTGCAGATGGTaGTATGTGTCTGAGAGGTGG +
Preference number: 3 (lower is better)
Translates to: ASKRALCNVKLFGEVAEELPCRW*YVSERW
Trigger: CCACCTCTCAGACACATACAACCATCTGCAGGGTAG...TTCTTCAGCAACTTCTCCAAAGAGTTTCACATTGCACAAGGCTCTTTTGGAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CAA 90 bp AAGATCAGACATCTGAAATCTGTGAAGCACCGGTTTCGACCTCGGGGATTCCTCGCTTCCAAAAGAGCCTaGTGCAATGTGAAACTCTTT +
Preference number: 3 (lower is better)
Translates to: KIRHLKSVKHRFRPRGFLASKRA*CNVKLF
Trigger: AAAGAGTTTCACATTGCACAAGGCTCTTTTGGAAGC...GAGGAATCCCCGAGGTCGAAACCGGTGCTTCACAGATTTCAGATGTCTGATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR TCA 72 bp AGAGCACAGAGAGAAGTCTCCCTTAATGCACGATTTTaGGACAATTCCCTGGCTTACAGACCAGGTCCAACT +
Preference number: 3 (lower is better)
Translates to: RAQREVSLNARF*DNSLAYRPGPT
Trigger: AGTTGGACCTGGTCTGTAAGCCAGGGAATTGTCTCAAAATCGTGCATTAAGGGAGACTTCTCTCTGTGCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR CCA 72 bp GGCGTTGCTTCAGTAGAAGGGGATTCTGAAGGAGAATaGTCAGTGTTTATAAGACTGAAGCTGGAACAGAGC +
Preference number: 3 (lower is better)
Translates to: GVASVEGDSEGE*SVFIRLKLEQS
Trigger: GCTCTGTTCCAGCTTCAGTCTTATAAACACTGACCATTCTCCTTCAGAATCCCCTTCTACTGAAGCAACGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CAA 90 bp GCTTCCAAAAGAGCCTTGTGCAATGTGAAACTCTTTGGAGAAGTTGCTGAAGAATCTGATTATGCTCAATaGTGGGCTGAAGTGGGTGGC +
Preference number: 3 (lower is better)
Translates to: ASKRALCNVKLFGEVAEESDYAQ*WAEVGG
Trigger: GCCACCCACTTCAGCCCACAATTGAGCATAATCAGA...TTCTTCAGCAACTTCTCCAAAGAGTTTCACATTGCACAAGGCTCTTTTGGAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CAA 90 bp AGAAAGCTGTCTCTACTTAGGGTTTGTCTCCCTCTGAATTTACTGACCACTCCTATGAAGATGCCCTCATaGAATCCACTGTGCTTCCAG +
Preference number: 3 (lower is better)
Translates to: RKLSLLRVCLPLNLLTTPMKMPS*NPLCFQ
Trigger: CTGGAAGCACAGTGGATTCAATGAGGGCATCTTCAT...AGGAGTGGTCAGTAAATTCAGAGGGAGACAAACCCTAAGTAGAGACAGCTTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CAA 90 bp AAGCCATATGCACATCTGCCCCACTTCCCTAAAGCACTGAGTCTGTTTTGGGCATTTAGAAAGGTCATCTaGCCCAAGTTCACATGGTTA +
Preference number: 3 (lower is better)
Translates to: KPYAHLPHFPKALSLFWAFRKVI*PKFTWL
Trigger: TAACCATGTGAACTTGGGCAAGATGACCTTTCTAAA...TGCCCAAAACAGACTCAGTGCTTTAGGGAAGTGGGGCAGATGTGCATATGGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CAA 90 bp CTAGCATCCAAATTACTTCCTTATTGTGTTTCCTTGCTCAGTGTCAAACAATCCTCCGTTCTGAAGGCCTaGTTTGCAGAACAGCAGGAG +
Preference number: 3 (lower is better)
Translates to: LASKLLPYCVSLLSVKQSSVLKA*FAEQQE
Trigger: CTCCTGCTGTTCTGCAAACAAGGCCTTCAGAACGGA...GGATTGTTTGACACTGAGCAAGGAAACACAATAAGGAAGTAATTTGGATGCTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CAA 90 bp CTAGCATCCAAATTACTTCCTTATTGTGTTTCCTTGCTCAGTGTCAAACAATCCTCCTGGTCCCTCTCCTaGGTGGCAGAAATAGGTTTC +
Preference number: 3 (lower is better)
Translates to: LASKLLPYCVSLLSVKQSSWSLS*VAEIGF
Trigger: GAAACCTATTTCTGCCACCAAGGAGAGGGACCAGGA...GGATTGTTTGACACTGAGCAAGGAAACACAATAAGGAAGTAATTTGGATGCTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CAA 90 bp GGGAGGGTCATGTTGTTTTTAATTGCAAATACAGAAGTCAGACAAGAAGCACCATTTGGGCACCTTGCTTaGGGAAGTGCTGACTGCAAT +
Preference number: 3 (lower is better)
Translates to: GRVMLFLIANTEVRQEAPFGHLA*GSADCN
Trigger: ATTGCAGTCAGCACTTCCCAAAGCAAGGTGCCCAAA...TGGTGCTTCTTGTCTGACTTCTGTATTTGCAATTAAAAACAACATGACCCTCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR CCA 72 bp AAGTCTCCCTTAATGCACGATTTTGAGACAATTCCCTaGCTTACAGACCAGGTCCAACTCCTCATTCTTTCA +
Preference number: 3 (lower is better)
Translates to: KSPLMHDFETIP*LTDQVQLLILS
Trigger: TGAAAGAATGAGGAGTTGGACCTGGTCTGTAAGCCAGGGAATTGTCTCAAAATCGTGCATTAAGGGAGACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CAA 90 bp GTCATCACAATCACACAGCTCAGCACCAAAGAAAGCTGTCTCTACTTAGGGTTTGCTTCCAAAAGAGCCTaGTGCAATGTGAAACTCTTT +
Preference number: 3 (lower is better)
Translates to: VITITQLSTKESCLYLGFASKRA*CNVKLF
Trigger: AAAGAGTTTCACATTGCACAAGGCTCTTTTGGAAGC...AAACCCTAAGTAGAGACAGCTTTCTTTGGTGCTGAGCTGTGTGATTGTGATGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CAA 90 bp CTAGCATCCAAATTACTTCCTTATTGTGTTTCCTTGCTCAGTGTCAAACAATCCTTTGGGCACCTTGCTTaGGGAAGTGCTGACTGCAAT +
Preference number: 3 (lower is better)
Translates to: LASKLLPYCVSLLSVKQSFGHLA*GSADCN
Trigger: ATTGCAGTCAGCACTTCCCAAAGCAAGGTGCCCAAA...GGATTGTTTGACACTGAGCAAGGAAACACAATAAGGAAGTAATTTGGATGCTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CAA 90 bp GTACTGCAACAGCCTTCTATTAAAGTGAAAACAGGAGTGATAGGAATATATTTCTCTGTCTCTGGGCCCTaGCTTGGCTGTTTCCATGAA +
Preference number: 3 (lower is better)
Translates to: VLQQPSIKVKTGVIGIYFSVSGP*LGCFHE
Trigger: TTCATGGAAACAGCCAAGCAAGGGCCCAGAGACAGA...GAAATATATTCCTATCACTCCTGTTTTCACTTTAATAGAAGGCTGTTGCAGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CAA 90 bp GTCATCACAATCACACAGCTCAGCACCAAAGAAAGCTGTCTCTACTTAGGGTTTAACTCTTTGGAGAAGTaGCTGAAGAAGAGCTATGAA +
Preference number: 3 (lower is better)
Translates to: VITITQLSTKESCLYLGFNSLEK*LKKSYE
Trigger: TTCATAGCTCTTCTTCAGCAACTTCTCCAAAGAGTT...AAACCCTAAGTAGAGACAGCTTTCTTTGGTGCTGAGCTGTGTGATTGTGATGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR TCA 72 bp AGTGAAAACAGGAGTGATAGGAATATATTTCGAAGTTaGATTTCTAACGATATCTGGCTGCAGGTGGGGAGG +
Preference number: 3 (lower is better)
Translates to: SENRSDRNIFRS*ISNDIWLQVGR
Trigger: CCTCCCCACCTGCAGCCAGATATCGTTAGAAATTCAACTTCGAAATATATTCCTATCACTCCTGTTTTCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR-3UTR CAA 90 bp GGGAGGGTCATGTTGTTTTTAATTGCAAATACAGAAGTCAGACAAGAAGCACCAAACTCTTTGGAGAAGTaGCTGAAGAAGAGCTATGAA +
Preference number: 3 (lower is better)
Translates to: GRVMLFLIANTEVRQEAPNSLEK*LKKSYE
Trigger: TTCATAGCTCTTCTTCAGCAACTTCTCCAAAGAGTT...TGGTGCTTCTTGTCTGACTTCTGTATTTGCAATTAAAAACAACATGACCCTCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR GCA 72 bp AAACATGCTTATTATTTCAGGATTTCACAGGCACTTTaGTCAGCACTTAATCCTCATACCAACCCTATAAAG +
Preference number: 3 (lower is better)
Translates to: KHAYYFRISQAL*SALNPHTNPIK
Trigger: CTTTATAGGGTTGGTATGAGGATTAAGTGCTGAGCAAAGTGCCTGTGAAATCCTGAAATAATAAGCATGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp GAGGCCGTCCTCAACCCTGGCCGCCGACAGCCAACACAGCAGCTAGGAGGAACACAGCCCCGGTGTCGCTaGACAGGGTCTCCCCGCGCG +
Preference number: 4 (lower is better)
Translates to: EAVLNPGRRQPTQQLGGTQPRCR*TGSPRA
Trigger: CGCGCGGGGAGACCCTGTGCAGCGACACCGGGGCTG...TGTTCCTCCTAGCTGCTGTGTTGGCTGTCGGCGGCCAGGGTTGAGGACGGCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405109.5
CDS-3UTR TCA 90 bp GAGGCCGTCCTCAACCCTGGCCGCCGACAGCCAACACAGCAGCTAGGAGGAACACCAACAAGGCCTCCTTaGGCCAGGGAGACGCGGCAG +
Preference number: 4 (lower is better)
Translates to: EAVLNPGRRQPTQQLGGTPTRPP*ARETRQ
Trigger: CTGCCGCGTCTCCCTGGCTCAAGGAGGCCTTGTTGG...TGTTCCTCCTAGCTGCTGTGTTGGCTGTCGGCGGCCAGGGTTGAGGACGGCCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp CTCCTGGTCACTGCCCTCCTGGCTCCAGCAGAGGTCATGCCCCTTCTCGGTCCTCAGCCACTGTGCGCCTaGGCACCTATTCCCGCGCTG +
Preference number: 4 (lower is better)
Translates to: LLVTALLAPAEVMPLLGPQPLCA*APIPAL
Trigger: CAGCGCGGGAATAGGTGCGCAGGCGCACAGTGGCTG...AGGACCGAGAAGGGGCATGACCTCTGCTGGAGCCAGGAGGGCAGTGACCAGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405109.5
CDS-3UTR CCA 90 bp CTCCTGGTCACTGCCCTCCTGGCTCCAGCAGAGGTCATGCCCCTTCTCGGTCCTGCAAAGGCCGGGCCATaGGGTTGGCAGCAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: LLVTALLAPAEVMPLLGPAKAGP*GWQQLE
Trigger: CTCCAGCTGCTGCCAACCCCATGGCCCGGCCTTTGC...AGGACCGAGAAGGGGCATGACCTCTGCTGGAGCCAGGAGGGCAGTGACCAGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp GAGGCCGTCCTCAACCCTGGCCGCCGACAGCCAACACAGCAGCTAGGAGGAACAGGCCACTGCCCAATATaGGCCTGTGCTGGCTGGGCG +
Preference number: 4 (lower is better)
Translates to: EAVLNPGRRQPTQQLGGTGHCPI*ACAGWA
Trigger: CGCCCAGCCAGCACAGGCCCATATTGGGCAGTGGCC...TGTTCCTCCTAGCTGCTGTGTTGGCTGTCGGCGGCCAGGGTTGAGGACGGCCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405109.5
3UTR CAA 72 bp GTGCGAAGAGAAAGGCGGGACCCCCACCCTCCCGAGTaGAGCCTACTTGGGGCCAACCTACGCTGGGTCTCC +
Preference number: 4 (lower is better)
Translates to: VRRERRDPHPPE*SLLGANLRWVS
Trigger: GGAGACCCAGCGTAGGTTGGCCCCAAGTAGGCTCAACTCGGGAGGGTGGGGGTCCCGCCTTTCTCTTCGCAC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR TCA 90 bp CCTGGCTTGGGTGGCTTGGGCGAGTCCTGTTCAGCCAGGACTACCCTGCAGATGCCCACCCTCCCGAGTTaGGCCTACTTGGGGCCAACC +
Preference number: 4 (lower is better)
Translates to: PGLGGLGESCSARTTLQMPTLPS*AYLGPT
Trigger: GGTTGGCCCCAAGTAGGCTCAACTCGGGAGGGTGGG...CATCTGCAGGGTAGTCCTGGCTGAACAGGACTCGCCCAAGCCACCCAAGCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp GAGGCCGTCCTCAACCCTGGCCGCCGACAGCCAACACAGCAGCTAGGAGGAACATTTGAAGGTGCTGCCTaGTTCGGGGCGCGTCCCCAC +
Preference number: 4 (lower is better)
Translates to: EAVLNPGRRQPTQQLGGTFEGAA*FGARPH
Trigger: GTGGGGACGCGCCCCGAACCAGGCAGCACCTTCAAA...TGTTCCTCCTAGCTGCTGTGTTGGCTGTCGGCGGCCAGGGTTGAGGACGGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405109.5
CDS-3UTR TCA 90 bp GAGGCCGTCCTCAACCCTGGCCGCCGACAGCCAACACAGCAGCTAGGAGGAACACCTGAATGTGTCCATTaGGGGCATCGGGGGCCTCAG +
Preference number: 4 (lower is better)
Translates to: EAVLNPGRRQPTQQLGGTPECVH*GHRGPQ
Trigger: CTGAGGCCCCCGATGCCCTCAATGGACACATTCAGG...TGTTCCTCCTAGCTGCTGTGTTGGCTGTCGGCGGCCAGGGTTGAGGACGGCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR TCA 90 bp GCCAGGTACTGTGAGTGCACTTGGGGCACAAGTGCGAAGAGAAAGGCGGGACCCGCCAGCGGGCCTGACTaGGGCCACTGCCCAATATGG +
Preference number: 4 (lower is better)
Translates to: ARYCECTWGTSAKRKAGPASGPD*GHCPIW
Trigger: CCATATTGGGCAGTGGCCTCAGTCAGGCCCGCTGGC...GGGTCCCGCCTTTCTCTTCGCACTTGTGCCCCAAGTGCACTCACAGTACCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405109.5
CDS-3UTR GCA 90 bp GAGGCCGTCCTCAACCCTGGCCGCCGACAGCCAACACAGCAGCTAGGAGGAACACGGAGTGGACCAGGCTaGAGAACCCCACATCCCTGT +
Preference number: 4 (lower is better)
Translates to: EAVLNPGRRQPTQQLGGTRSGPG*RTPHPC
Trigger: ACAGGGATGTGGGGTTCTGCAGCCTGGTCCACTCCG...TGTTCCTCCTAGCTGCTGTGTTGGCTGTCGGCGGCCAGGGTTGAGGACGGCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp CTCCTGGTCACTGCCCTCCTGGCTCCAGCAGAGGTCATGCCCCTTCTCGGTCCTCGGAGTGGACCAGGCTaGAGAACCCCACATCCCTGT +
Preference number: 4 (lower is better)
Translates to: LLVTALLAPAEVMPLLGPRSGPG*RTPHPC
Trigger: ACAGGGATGTGGGGTTCTGCAGCCTGGTCCACTCCG...AGGACCGAGAAGGGGCATGACCTCTGCTGGAGCCAGGAGGGCAGTGACCAGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp GCCAGGTACTGTGAGTGCACTTGGGGCACAAGTGCGAAGAGAAAGGCGGGACCCCTCCAGGACACTCCCTaGCAGCCCCGGAGTGGACCA +
Preference number: 4 (lower is better)
Translates to: ARYCECTWGTSAKRKAGPLQDTP*QPRSGP
Trigger: TGGTCCACTCCGGGGCTGGCAGGGAGTGTCCTGGAG...GGGTCCCGCCTTTCTCTTCGCACTTGTGCCCCAAGTGCACTCACAGTACCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp CCTGGCTTGGGTGGCTTGGGCGAGTCCTGTTCAGCCAGGACTACCCTGCAGATGTCAGATTCCTGGACGTaGTCGGGGCCCAGGCCCTCT +
Preference number: 4 (lower is better)
Translates to: PGLGGLGESCSARTTLQMSDSWT*SGPRPS
Trigger: AGAGGGCCTGGGCCCCGAGCACGTCCAGGAATCTGA...CATCTGCAGGGTAGTCCTGGCTGAACAGGACTCGCCCAAGCCACCCAAGCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp CCTGGCTTGGGTGGCTTGGGCGAGTCCTGTTCAGCCAGGACTACCCTGCAGATGCTGGGAGGCGGAGGTTaGAGTGGGCTGAGATCGTGC +
Preference number: 4 (lower is better)
Translates to: PGLGGLGESCSARTTLQMLGGGG*SGLRSC
Trigger: GCACGATCTCAGCCCACTGCAACCTCCGCCTCCCAG...CATCTGCAGGGTAGTCCTGGCTGAACAGGACTCGCCCAAGCCACCCAAGCCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp CTGATTGAGAAACACTGCCCCATGCCGGCCACCCAAGAGGTCACCCACATGCCACTGCCAGCCCCGGAGTaGACCAGGCTGCAGAACCCC +
Preference number: 4 (lower is better)
Translates to: LIEKHCPMPATQEVTHMPLPAPE*TRLQNP
Trigger: GGGGTTCTGCAGCCTGGTCCACTCCGGGGCTGGCAG...TGGCATGTGGGTGACCTCTTGGGTGGCCGGCATGGGGCAGTGTTTCTCAATCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp GAGGCCGTCCTCAACCCTGGCCGCCGACAGCCAACACAGCAGCTAGGAGGAACACTGGCTTGGGTGGCTTaGGCGAGTCCTGTTCAGCCA +
Preference number: 4 (lower is better)
Translates to: EAVLNPGRRQPTQQLGGTLAWVA*ASPVQP
Trigger: TGGCTGAACAGGACTCGCCCAAGCCACCCAAGCCAG...TGTTCCTCCTAGCTGCTGTGTTGGCTGTCGGCGGCCAGGGTTGAGGACGGCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp GAGGCCGTCCTCAACCCTGGCCGCCGACAGCCAACACAGCAGCTAGGAGGAACATGTCCCTGGCTTGGGTaGCTTGGGCGAGTCCTGTTC +
Preference number: 4 (lower is better)
Translates to: EAVLNPGRRQPTQQLGGTCPWLG*LGRVLF
Trigger: GAACAGGACTCGCCCAAGCCACCCAAGCCAGGGACA...TGTTCCTCCTAGCTGCTGTGTTGGCTGTCGGCGGCCAGGGTTGAGGACGGCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp GAGGCCGTCCTCAACCCTGGCCGCCGACAGCCAACACAGCAGCTAGGAGGAACACTACGCTGGGTCTCCTaGTCCCTCTCCTTGGTGGCA +
Preference number: 4 (lower is better)
Translates to: EAVLNPGRRQPTQQLGGTLRWVS*SLSLVA
Trigger: TGCCACCAAGGAGAGGGACCAGGAGACCCAGCGTAG...TGTTCCTCCTAGCTGCTGTGTTGGCTGTCGGCGGCCAGGGTTGAGGACGGCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp GAGGCCGTCCTCAACCCTGGCCGCCGACAGCCAACACAGCAGCTAGGAGGAACACTCTCAGCCGCCAACTaGAGGAGCCAAGCAACAGGG +
Preference number: 4 (lower is better)
Translates to: EAVLNPGRRQPTQQLGGTLSAAN*RSQATG
Trigger: CCCTGTTGCTTGGCTCCTCCAGTTGGCGGCTGAGAG...TGTTCCTCCTAGCTGCTGTGTTGGCTGTCGGCGGCCAGGGTTGAGGACGGCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp GCCAGGTACTGTGAGTGCACTTGGGGCACAAGTGCGAAGAGAAAGGCGGGACCCCGCTGGGCCACGACCTaGCTTGGACGCTACCGTGTG +
Preference number: 4 (lower is better)
Translates to: ARYCECTWGTSAKRKAGPRWATT*LGRYRV
Trigger: CACACGGTAGCGTCCAAGCCAGGTCGTGGCCCAGCG...GGGTCCCGCCTTTCTCTTCGCACTTGTGCCCCAAGTGCACTCACAGTACCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405109.5
ENST00000407609.7
CDS-3UTR TCA 90 bp GAGGCCGTCCTCAACCCTGGCCGCCGACAGCCAACACAGCAGCTAGGAGGAACAGCCCGCACACTCCATTaGTCTTGGCTGGGGTCATAC +
Preference number: 4 (lower is better)
Translates to: EAVLNPGRRQPTQQLGGTARTLH*SWLGSY
Trigger: GTATGACCCCAGCCAAGATCAATGGAGTGTGCGGGC...TGTTCCTCCTAGCTGCTGTGTTGGCTGTCGGCGGCCAGGGTTGAGGACGGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR TCA 90 bp CTCCTGGTCACTGCCCTCCTGGCTCCAGCAGAGGTCATGCCCCTTCTCGGTCCTGCCCGCACACTCCATTaGTCTTGGCTGGGGTCATAC +
Preference number: 4 (lower is better)
Translates to: LLVTALLAPAEVMPLLGPARTLH*SWLGSY
Trigger: GTATGACCCCAGCCAAGATCAATGGAGTGTGCGGGC...AGGACCGAGAAGGGGCATGACCTCTGCTGGAGCCAGGAGGGCAGTGACCAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR TCA 90 bp GAGGCCGTCCTCAACCCTGGCCGCCGACAGCCAACACAGCAGCTAGGAGGAACAGGAATTGGTGCGGAGTaGGAGGAGGGGACTTGGCAT +
Preference number: 4 (lower is better)
Translates to: EAVLNPGRRQPTQQLGGTGIGAE*EEGTWH
Trigger: ATGCCAAGTCCCCTCCTCTCACTCCGCACCAATTCC...TGTTCCTCCTAGCTGCTGTGTTGGCTGTCGGCGGCCAGGGTTGAGGACGGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR TCA 90 bp ATGACATGCCAACAAGGCCTCCTTGAGCCAGGGAGACGCGGCAGCTTTCTGGACCCAACAAGGCCTCCTTaGGCCAGGGAGACGCGGCAG +
Preference number: 4 (lower is better)
Translates to: MTCQQGLLEPGRRGSFLDPTRPP*ARETRQ
Trigger: CTGCCGCGTCTCCCTGGCTCAAGGAGGCCTTGTTGG...GTCCAGAAAGCTGCCGCGTCTCCCTGGCTCAAGGAGGCCTTGTTGGCATGTCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp CTCCTGGTCACTGCCCTCCTGGCTCCAGCAGAGGTCATGCCCCTTCTCGGTCCTCCCATCCACTGCCCCTaGATTGGTGGAATTGGTGCG +
Preference number: 4 (lower is better)
Translates to: LLVTALLAPAEVMPLLGPPIHCP*IGGIGA
Trigger: CGCACCAATTCCACCAATGCAGGGGCAGTGGATGGG...AGGACCGAGAAGGGGCATGACCTCTGCTGGAGCCAGGAGGGCAGTGACCAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp GAGGCCGTCCTCAACCCTGGCCGCCGACAGCCAACACAGCAGCTAGGAGGAACAAGTTTTGGCAAGACCTaGCTGTCCTGCCTGGTGGGC +
Preference number: 4 (lower is better)
Translates to: EAVLNPGRRQPTQQLGGTSFGKT*LSCLVG
Trigger: GCCCACCAGGCAGGACAGGCAGGTCTTGCCAAAACT...TGTTCCTCCTAGCTGCTGTGTTGGCTGTCGGCGGCCAGGGTTGAGGACGGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp CCTGGCTTGGGTGGCTTGGGCGAGTCCTGTTCAGCCAGGACTACCCTGCAGATGCTGAGATCGTGCCACTaGACTGCACTCCAGCCTGGC +
Preference number: 4 (lower is better)
Translates to: PGLGGLGESCSARTTLQMLRSCH*TALQPG
Trigger: GCCAGGCTGGAGTGCAGTGCAGTGGCACGATCTCAG...CATCTGCAGGGTAGTCCTGGCTGAACAGGACTCGCCCAAGCCACCCAAGCCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp CCTGGCTTGGGTGGCTTGGGCGAGTCCTGTTCAGCCAGGACTACCCTGCAGATGCTCCAGCAGAGGTCATaGCCCTTCTCGGTCCTCCCT +
Preference number: 4 (lower is better)
Translates to: PGLGGLGESCSARTTLQMLQQRS*PFSVLP
Trigger: AGGGAGGACCGAGAAGGGGCATGACCTCTGCTGGAG...CATCTGCAGGGTAGTCCTGGCTGAACAGGACTCGCCCAAGCCACCCAAGCCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp GCTCAATTGTGGGCTGAAGTGGGTGGCTCCATCTTTATTGCAAAGGCCGGGCCAAGACCACGCCGCCGCTaGCCTCCAGCCACTGTGCGC +
Preference number: 4 (lower is better)
Translates to: AQLWAEVGGSIFIAKAGPRPRRR*PPATVR
Trigger: GCGCACAGTGGCTGGAGGGCAGCGGCGGCGTGGTCT...TGGCCCGGCCTTTGCAATAAAGATGGAGCCACCCACTTCAGCCCACAATTGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405109.5
CDS-3UTR CCA 90 bp CTCCTGGTCACTGCCCTCCTGGCTCCAGCAGAGGTCATGCCCCTTCTCGGTCCTCCTGTGCCCCTCCTGTaGCCGTCATCACCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: LLVTALLAPAEVMPLLGPPVPLL*PSSPLL
Trigger: AAGAAGAGGTGATGACGGCCACAGGAGGGGCACAGG...AGGACCGAGAAGGGGCATGACCTCTGCTGGAGCCAGGAGGGCAGTGACCAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp CTCCTGGTCACTGCCCTCCTGGCTCCAGCAGAGGTCATGCCCCTTCTCGGTCCTAGCCCTGCTGCTGGGTaGCGTTGCTTCAGTAGAAGG +
Preference number: 4 (lower is better)
Translates to: LLVTALLAPAEVMPLLGPSPAAG*RCFSRR
Trigger: CCTTCTACTGAAGCAACGCCACCCAGCAGCAGGGCT...AGGACCGAGAAGGGGCATGACCTCTGCTGGAGCCAGGAGGGCAGTGACCAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp AGTAAGCTCACTTTAACTCAGATTCCTGGACGTGCTCGGGGCCCAGGCCCTCTGCTGCCAGCCCCGGAGTaGACCAGGCTGCAGAACCCC +
Preference number: 4 (lower is better)
Translates to: SKLTLTQIPGRARGPGPLLPAPE*TRLQNP
Trigger: GGGGTTCTGCAGCCTGGTCCACTCCGGGGCTGGCAG...CAGAGGGCCTGGGCCCCGAGCACGTCCAGGAATCTGAGTTAAAGTGAGCTTACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp CCTGGCTTGGGTGGCTTGGGCGAGTCCTGTTCAGCCAGGACTACCCTGCAGATGTCTCTGTCCCTGGCTTaGGTGGCTTGGGCGAGTCCT +
Preference number: 4 (lower is better)
Translates to: PGLGGLGESCSARTTLQMSLSLA*VAWASP
Trigger: AGGACTCGCCCAAGCCACCCAAGCCAGGGACAGAGA...CATCTGCAGGGTAGTCCTGGCTGAACAGGACTCGCCCAAGCCACCCAAGCCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp CTGATTGAGAAACACTGCCCCATGCCGGCCACCCAAGAGGTCACCCACATGCCAGGCCGTCCTCAACCCTaGCCGCCGACAGCCAACACA +
Preference number: 4 (lower is better)
Translates to: LIEKHCPMPATQEVTHMPGRPQP*PPTANT
Trigger: TGTGTTGGCTGTCGGCGGCCAGGGTTGAGGACGGCC...TGGCATGTGGGTGACCTCTTGGGTGGCCGGCATGGGGCAGTGTTTCTCAATCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp ATGACATGCCAACAAGGCCTCCTTGAGCCAGGGAGACGCGGCAGCTTTCTGGACGGCCGTCCTCAACCCTaGCCGCCGACAGCCAACACA +
Preference number: 4 (lower is better)
Translates to: MTCQQGLLEPGRRGSFLDGRPQP*PPTANT
Trigger: TGTGTTGGCTGTCGGCGGCCAGGGTTGAGGACGGCC...GTCCAGAAAGCTGCCGCGTCTCCCTGGCTCAAGGAGGCCTTGTTGGCATGTCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp GGAAAGAGTAAGCTCACTTTAACTCAGATTCCTGGACGTGCTCGGGGCCCAGGCTTGGACGCTACCGTGTaGCAGGGCGGCCAGCGGGCC +
Preference number: 4 (lower is better)
Translates to: GKSKLTLTQIPGRARGPGLDATV*QGGQRA
Trigger: GGCCCGCTGGCCGCCCTGCCACACGGTAGCGTCCAA...GCCTGGGCCCCGAGCACGTCCAGGAATCTGAGTTAAAGTGAGCTTACTCTTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405109.5
ENST00000407609.7
CDS-3UTR TCA 90 bp CCTGGCTTGGGTGGCTTGGGCGAGTCCTGTTCAGCCAGGACTACCCTGCAGATGGGAATTGGTGCGGAGTaGGAGGAGGGGACTTGGCAT +
Preference number: 4 (lower is better)
Translates to: PGLGGLGESCSARTTLQMGIGAE*EEGTWH
Trigger: ATGCCAAGTCCCCTCCTCTCACTCCGCACCAATTCC...CATCTGCAGGGTAGTCCTGGCTGAACAGGACTCGCCCAAGCCACCCAAGCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR TCA 90 bp GCCAGGTACTGTGAGTGCACTTGGGGCACAAGTGCGAAGAGAAAGGCGGGACCCAGGCTGGGAAGTCCCTaGAGGGAGACTCCCCATGCT +
Preference number: 4 (lower is better)
Translates to: ARYCECTWGTSAKRKAGPRLGSP*RETPHA
Trigger: AGCATGGGGAGTCTCCCTTCAGGGACTTCCCAGCCT...GGGTCCCGCCTTTCTCTTCGCACTTGTGCCCCAAGTGCACTCACAGTACCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR TCA 90 bp CTCCTGGTCACTGCCCTCCTGGCTCCAGCAGAGGTCATGCCCCTTCTCGGTCCTCTACTTTTCCAGCCTTaGCCACAAACCCTGTGCCCC +
Preference number: 4 (lower is better)
Translates to: LLVTALLAPAEVMPLLGPLLFQP*PQTLCP
Trigger: GGGGCACAGGGTTTGTGGTCAAGGCTGGAAAAGTAG...AGGACCGAGAAGGGGCATGACCTCTGCTGGAGCCAGGAGGGCAGTGACCAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR TCA 90 bp GCCAGGTACTGTGAGTGCACTTGGGGCACAAGTGCGAAGAGAAAGGCGGGACCCTGGTCTCACCTAGCGTaGCCCTCAGGTGCCTCTGCT +
Preference number: 4 (lower is better)
Translates to: ARYCECTWGTSAKRKAGPWSHLA*PSGASA
Trigger: AGCAGAGGCACCTGAGGGTCACGCTAGGTGAGACCA...GGGTCCCGCCTTTCTCTTCGCACTTGTGCCCCAAGTGCACTCACAGTACCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR TCA 90 bp CCTGGCTTGGGTGGCTTGGGCGAGTCCTGTTCAGCCAGGACTACCCTGCAGATGACAATGCCACCGTGTTaGACACACTGGGGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: PGLGGLGESCSARTTLQMTMPPC*THWGRL
Trigger: CAGCCTGCCCCAGTGTGTTCAACACGGTGGCATTGT...CATCTGCAGGGTAGTCCTGGCTGAACAGGACTCGCCCAAGCCACCCAAGCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp CCTGGCTTGGGTGGCTTGGGCGAGTCCTGTTCAGCCAGGACTACCCTGCAGATGATGCTCCCCACCCAGTaGCCAGCACACACTGCTTCT +
Preference number: 4 (lower is better)
Translates to: PGLGGLGESCSARTTLQMMLPTQ*PAHTAS
Trigger: AGAAGCAGTGTGTGCTGGGCACTGGGTGGGGAGCAT...CATCTGCAGGGTAGTCCTGGCTGAACAGGACTCGCCCAAGCCACCCAAGCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp ATGACATGCCAACAAGGCCTCCTTGAGCCAGGGAGACGCGGCAGCTTTCTGGACTCTCCTGTGGCCCTGTaGCCCTCCTGTGGCCGTCAT +
Preference number: 4 (lower is better)
Translates to: MTCQQGLLEPGRRGSFLDSPVAL*PSCGRH
Trigger: ATGACGGCCACAGGAGGGGCACAGGGCCACAGGAGA...GTCCAGAAAGCTGCCGCGTCTCCCTGGCTCAAGGAGGCCTTGTTGGCATGTCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp CCTGGCTTGGGTGGCTTGGGCGAGTCCTGTTCAGCCAGGACTACCCTGCAGATGTCTGCTCCTTGGCAGTaGTGTTCATGGGTCCCCAGC +
Preference number: 4 (lower is better)
Translates to: PGLGGLGESCSARTTLQMSAPWQ*CSWVPS
Trigger: GCTGGGGACCCATGAACAGCACTGCCAAGGAGCAGA...CATCTGCAGGGTAGTCCTGGCTGAACAGGACTCGCCCAAGCCACCCAAGCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp GAGGCCGTCCTCAACCCTGGCCGCCGACAGCCAACACAGCAGCTAGGAGGAACATGGCTCCATCTTTATTaGAAAGGCCGGGCCATGGGG +
Preference number: 4 (lower is better)
Translates to: EAVLNPGRRQPTQQLGGTWLHLY*KGRAMG
Trigger: CCCCATGGCCCGGCCTTTGCAATAAAGATGGAGCCA...TGTTCCTCCTAGCTGCTGTGTTGGCTGTCGGCGGCCAGGGTTGAGGACGGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp GCCAGGTACTGTGAGTGCACTTGGGGCACAAGTGCGAAGAGAAAGGCGGGACCCCTGAGATCGTGCCACTaGACTGCACTCCAGCCTGGC +
Preference number: 4 (lower is better)
Translates to: ARYCECTWGTSAKRKAGPLRSCH*TALQPG
Trigger: GCCAGGCTGGAGTGCAGTGCAGTGGCACGATCTCAG...GGGTCCCGCCTTTCTCTTCGCACTTGTGCCCCAAGTGCACTCACAGTACCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp GCCAGGTACTGTGAGTGCACTTGGGGCACAAGTGCGAAGAGAAAGGCGGGACCCCTCCGAGGGGACAGGTaGTGCCCTCTGCTTGGAAGT +
Preference number: 4 (lower is better)
Translates to: ARYCECTWGTSAKRKAGPLRGDR*CPLLGS
Trigger: ACTTCCAAGCAGAGGGCAGCACCTGTCCCCTCGGAG...GGGTCCCGCCTTTCTCTTCGCACTTGTGCCCCAAGTGCACTCACAGTACCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000405109.5
CDS-3UTR CCA 90 bp ATGACATGCCAACAAGGCCTCCTTGAGCCAGGGAGACGCGGCAGCTTTCTGGACGGAGGGGACTTGGCATaGGAGGGCCCTCTCGCCAAA +
Preference number: 4 (lower is better)
Translates to: MTCQQGLLEPGRRGSFLDGGDLA*EGPLAK
Trigger: TTTGGCGAGAGGGCCCTCCCATGCCAAGTCCCCTCC...GTCCAGAAAGCTGCCGCGTCTCCCTGGCTCAAGGAGGCCTTGTTGGCATGTCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp CCTGGCTTGGGTGGCTTGGGCGAGTCCTGTTCAGCCAGGACTACCCTGCAGATGCCTGTGCCCCTCCTGTaGCCGTCATCACCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: PGLGGLGESCSARTTLQMPVPLL*PSSPLL
Trigger: AAGAAGAGGTGATGACGGCCACAGGAGGGGCACAGG...CATCTGCAGGGTAGTCCTGGCTGAACAGGACTCGCCCAAGCCACCCAAGCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp GGAAAGAGTAAGCTCACTTTAACTCAGATTCCTGGACGTGCTCGGGGCCCAGGCCTGCCAGCCCCGGAGTaGACCAGGCTGCAGAACCCC +
Preference number: 4 (lower is better)
Translates to: GKSKLTLTQIPGRARGPGLPAPE*TRLQNP
Trigger: GGGGTTCTGCAGCCTGGTCCACTCCGGGGCTGGCAG...GCCTGGGCCCCGAGCACGTCCAGGAATCTGAGTTAAAGTGAGCTTACTCTTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp GCCAGGTACTGTGAGTGCACTTGGGGCACAAGTGCGAAGAGAAAGGCGGGACCCTGTCCCTGGCTTGGGTaGCTTGGGCGAGTCCTGTTC +
Preference number: 4 (lower is better)
Translates to: ARYCECTWGTSAKRKAGPCPWLG*LGRVLF
Trigger: GAACAGGACTCGCCCAAGCCACCCAAGCCAGGGACA...GGGTCCCGCCTTTCTCTTCGCACTTGTGCCCCAAGTGCACTCACAGTACCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp GCCAGGTACTGTGAGTGCACTTGGGGCACAAGTGCGAAGAGAAAGGCGGGACCCCTCTCAGCCGCCAACTaGAGGAGCCAAGCAACAGGG +
Preference number: 4 (lower is better)
Translates to: ARYCECTWGTSAKRKAGPLSAAN*RSQATG
Trigger: CCCTGTTGCTTGGCTCCTCCAGTTGGCGGCTGAGAG...GGGTCCCGCCTTTCTCTTCGCACTTGTGCCCCAAGTGCACTCACAGTACCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp GCTCAATTGTGGGCTGAAGTGGGTGGCTCCATCTTTATTGCAAAGGCCGGGCCACGCGTCCCCACTCGCTaGGCCACGACCTGGCTTGGA +
Preference number: 4 (lower is better)
Translates to: AQLWAEVGGSIFIAKAGPRVPTR*ATTWLG
Trigger: TCCAAGCCAGGTCGTGGCCCAGCGAGTGGGGACGCG...TGGCCCGGCCTTTGCAATAAAGATGGAGCCACCCACTTCAGCCCACAATTGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405109.5
ENST00000407609.7
CDS-3UTR TCA 90 bp GAGGCCGTCCTCAACCCTGGCCGCCGACAGCCAACACAGCAGCTAGGAGGAACAGTGGAGCAGGTGGAGTaGCTATGTGAAGAGGAATGG +
Preference number: 4 (lower is better)
Translates to: EAVLNPGRRQPTQQLGGTVEQVE*LCEEEW
Trigger: CCATTCCTCTTCACATAGTCACTCCACCTGCTCCAC...TGTTCCTCCTAGCTGCTGTGTTGGCTGTCGGCGGCCAGGGTTGAGGACGGCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp CTCCTGGTCACTGCCCTCCTGGCTCCAGCAGAGGTCATGCCCCTTCTCGGTCCTCTGTCTCTGGGCCCTTaGTTGGCTGTTTCCATGAAC +
Preference number: 4 (lower is better)
Translates to: LLVTALLAPAEVMPLLGPLSLGP*LAVSMN
Trigger: GTTCATGGAAACAGCCAAGCAAGGGCCCAGAGACAG...AGGACCGAGAAGGGGCATGACCTCTGCTGGAGCCAGGAGGGCAGTGACCAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp GCTCAATTGTGGGCTGAAGTGGGTGGCTCCATCTTTATTGCAAAGGCCGGGCCACTCCAGGACACTCCCTaGCAGCCCCGGAGTGGACCA +
Preference number: 4 (lower is better)
Translates to: AQLWAEVGGSIFIAKAGPLQDTP*QPRSGP
Trigger: TGGTCCACTCCGGGGCTGGCAGGGAGTGTCCTGGAG...TGGCCCGGCCTTTGCAATAAAGATGGAGCCACCCACTTCAGCCCACAATTGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp CCTGGCTTGGGTGGCTTGGGCGAGTCCTGTTCAGCCAGGACTACCCTGCAGATGTGGCTCCATCTTTATTaGAAAGGCCGGGCCATGGGG +
Preference number: 4 (lower is better)
Translates to: PGLGGLGESCSARTTLQMWLHLY*KGRAMG
Trigger: CCCCATGGCCCGGCCTTTGCAATAAAGATGGAGCCA...CATCTGCAGGGTAGTCCTGGCTGAACAGGACTCGCCCAAGCCACCCAAGCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp GCCAGGTACTGTGAGTGCACTTGGGGCACAAGTGCGAAGAGAAAGGCGGGACCCGCCAGGTACTGTGAGTaGACTTGGGGCACAAGTGCG +
Preference number: 4 (lower is better)
Translates to: ARYCECTWGTSAKRKAGPARYCE*TWGTSA
Trigger: CGCACTTGTGCCCCAAGTGCACTCACAGTACCTGGC...GGGTCCCGCCTTTCTCTTCGCACTTGTGCCCCAAGTGCACTCACAGTACCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp ATGACATGCCAACAAGGCCTCCTTGAGCCAGGGAGACGCGGCAGCTTTCTGGACATGATACGAAGGTGCTaGCTGGTTCGGGGCGCGTCC +
Preference number: 4 (lower is better)
Translates to: MTCQQGLLEPGRRGSFLDMIRRC*LVRGAS
Trigger: GGACGCGCCCCGAACCAGGCAGCACCTTCGTATCAT...GTCCAGAAAGCTGCCGCGTCTCCCTGGCTCAAGGAGGCCTTGTTGGCATGTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407609.7
CDS-3UTR CCA 90 bp GAGGCCGTCCTCAACCCTGGCCGCCGACAGCCAACACAGCAGCTAGGAGGAACATTGGCCACTGTGGTCTaGCTTGAGTGCCTTGGTTGT +
Preference number: 4 (lower is better)
Translates to: EAVLNPGRRQPTQQLGGTLATVV*LECLGC
Trigger: ACAACCAAGGCACTCAAGCCAGACCACAGTGGCCAA...TGTTCCTCCTAGCTGCTGTGTTGGCTGTCGGCGGCCAGGGTTGAGGACGGCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp CCTGGCTTGGGTGGCTTGGGCGAGTCCTGTTCAGCCAGGACTACCCTGCAGATGTATGTGTCTGAGAGGTaGGCAAAGGCAGCCTGGGTC +
Preference number: 4 (lower is better)
Translates to: PGLGGLGESCSARTTLQMYVSER*AKAAWV
Trigger: GACCCAGGCTGCCTTTGCCCACCTCTCAGACACATA...CATCTGCAGGGTAGTCCTGGCTGAACAGGACTCGCCCAAGCCACCCAAGCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp ATGACATGCCAACAAGGCCTCCTTGAGCCAGGGAGACGCGGCAGCTTTCTGGACTCTCTGTCCCTGGCTTaGGTGGCTTGGGCGAGTCCT +
Preference number: 4 (lower is better)
Translates to: MTCQQGLLEPGRRGSFLDSLSLA*VAWASP
Trigger: AGGACTCGCCCAAGCCACCCAAGCCAGGGACAGAGA...GTCCAGAAAGCTGCCGCGTCTCCCTGGCTCAAGGAGGCCTTGTTGGCATGTCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp CCTGGCTTGGGTGGCTTGGGCGAGTCCTGTTCAGCCAGGACTACCCTGCAGATGTTTAACTCAGATTCCTaGACGTGCTCGGGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: PGLGGLGESCSARTTLQMFNSDS*TCSGPR
Trigger: CCTGGGCCCCGAGCACGTCCAGGAATCTGAGTTAAA...CATCTGCAGGGTAGTCCTGGCTGAACAGGACTCGCCCAAGCCACCCAAGCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp GCTCAATTGTGGGCTGAAGTGGGTGGCTCCATCTTTATTGCAAAGGCCGGGCCAGGCCGTCCTCAACCCTaGCCGCCGACAGCCAACACA +
Preference number: 4 (lower is better)
Translates to: AQLWAEVGGSIFIAKAGPGRPQP*PPTANT
Trigger: TGTGTTGGCTGTCGGCGGCCAGGGTTGAGGACGGCC...TGGCCCGGCCTTTGCAATAAAGATGGAGCCACCCACTTCAGCCCACAATTGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp ATGACATGCCAACAAGGCCTCCTTGAGCCAGGGAGACGCGGCAGCTTTCTGGACAGGCGGAGGTTGCAGTaGGCTGAGATCGTGCCACTG +
Preference number: 4 (lower is better)
Translates to: MTCQQGLLEPGRRGSFLDRRRLQ*AEIVPL
Trigger: CAGTGGCACGATCTCAGCCCACTGCAACCTCCGCCT...GTCCAGAAAGCTGCCGCGTCTCCCTGGCTCAAGGAGGCCTTGTTGGCATGTCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp AAGATCAGACATCTGAAATCTGTGAAGCACCGGTTTCGACCTCGGGGATTCCTCGAGGAGGGAGGGCGCTaGCAGCGCCTCCGAGGGGAC +
Preference number: 4 (lower is better)
Translates to: KIRHLKSVKHRFRPRGFLEEGGR*QRLRGD
Trigger: GTCCCCTCGGAGGCGCTGCCAGCGCCCTCCCTCCTC...GAGGAATCCCCGAGGTCGAAACCGGTGCTTCACAGATTTCAGATGTCTGATCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405109.5
CDS-3UTR TCA 90 bp CTGATTGAGAAACACTGCCCCATGCCGGCCACCCAAGAGGTCACCCACATGCCAGCCCGCACACTCCATTaGTCTTGGCTGGGGTCATAC +
Preference number: 4 (lower is better)
Translates to: LIEKHCPMPATQEVTHMPARTLH*SWLGSY
Trigger: GTATGACCCCAGCCAAGATCAATGGAGTGTGCGGGC...TGGCATGTGGGTGACCTCTTGGGTGGCCGGCATGGGGCAGTGTTTCTCAATCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR TCA 90 bp CTGATTGAGAAACACTGCCCCATGCCGGCCACCCAAGAGGTCACCCACATGCCAGGGCCCTCTCCGTTCTaGAGGCCTTGTTTGCAGAAC +
Preference number: 4 (lower is better)
Translates to: LIEKHCPMPATQEVTHMPGPSPF*RPCLQN
Trigger: GTTCTGCAAACAAGGCCTTCAGAACGGAGAGGGCCC...TGGCATGTGGGTGACCTCTTGGGTGGCCGGCATGGGGCAGTGTTTCTCAATCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR TCA 90 bp ATGACATGCCAACAAGGCCTCCTTGAGCCAGGGAGACGCGGCAGCTTTCTGGACGGGCCCTCTCCGTTCTaGAGGCCTTGTTTGCAGAAC +
Preference number: 4 (lower is better)
Translates to: MTCQQGLLEPGRRGSFLDGPSPF*RPCLQN
Trigger: GTTCTGCAAACAAGGCCTTCAGAACGGAGAGGGCCC...GTCCAGAAAGCTGCCGCGTCTCCCTGGCTCAAGGAGGCCTTGTTGGCATGTCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR TCA 90 bp AGTAAGCTCACTTTAACTCAGATTCCTGGACGTGCTCGGGGCCCAGGCCCTCTGAGGCTGGGAAGTCCCTaGAGGGAGACTCCCCATGCT +
Preference number: 4 (lower is better)
Translates to: SKLTLTQIPGRARGPGPLRLGSP*RETPHA
Trigger: AGCATGGGGAGTCTCCCTTCAGGGACTTCCCAGCCT...CAGAGGGCCTGGGCCCCGAGCACGTCCAGGAATCTGAGTTAAAGTGAGCTTACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR TCA 90 bp CCTGGCTTGGGTGGCTTGGGCGAGTCCTGTTCAGCCAGGACTACCCTGCAGATGATGGTTGTATGTGTCTaGGAGGTGGGCAAAGGCAGC +
Preference number: 4 (lower is better)
Translates to: PGLGGLGESCSARTTLQMMVVCV*EVGKGS
Trigger: GCTGCCTTTGCCCACCTCTCAGACACATACAACCAT...CATCTGCAGGGTAGTCCTGGCTGAACAGGACTCGCCCAAGCCACCCAAGCCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR TCA 90 bp CTGATTGAGAAACACTGCCCCATGCCGGCCACCCAAGAGGTCACCCACATGCCAACAATGCCACCGTGTTaGACACACTGGGGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: LIEKHCPMPATQEVTHMPTMPPC*THWGRL
Trigger: CAGCCTGCCCCAGTGTGTTCAACACGGTGGCATTGT...TGGCATGTGGGTGACCTCTTGGGTGGCCGGCATGGGGCAGTGTTTCTCAATCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR TCA 90 bp ATGAACTCATCATTGACTGCACCCATGGGACCACTTCCTCCTCATCCTTTTGGGGGCGGCCAGCGGGCCTaGCTGAGGCCACTGCCCAAT +
Preference number: 4 (lower is better)
Translates to: MNSSLTAPMGPLPPHPFGGGQRA*LRPLPN
Trigger: ATTGGGCAGTGGCCTCAGTCAGGCCCGCTGGCCGCC...CCCAAAAGGATGAGGAGGAAGTGGTCCCATGGGTGCAGTCAATGATGAGTTCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000405109.5
ENST00000407609.7
CDS-3UTR TCA 90 bp AAGATCAGACATCTGAAATCTGTGAAGCACCGGTTTCGACCTCGGGGATTCCTCGGCGGCCAGCGGGCCTaGCTGAGGCCACTGCCCAAT +
Preference number: 4 (lower is better)
Translates to: KIRHLKSVKHRFRPRGFLGGQRA*LRPLPN
Trigger: ATTGGGCAGTGGCCTCAGTCAGGCCCGCTGGCCGCC...GAGGAATCCCCGAGGTCGAAACCGGTGCTTCACAGATTTCAGATGTCTGATCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405109.5
ENST00000407609.7
CDS-3UTR GCA 90 bp GAGGCCGTCCTCAACCCTGGCCGCCGACAGCCAACACAGCAGCTAGGAGGAACAAGAGTACTTCATGGGTaGCCGCACACTCCATTGATC +
Preference number: 4 (lower is better)
Translates to: EAVLNPGRRQPTQQLGGTRVLHG*PHTPLI
Trigger: GATCAATGGAGTGTGCGGGCACCCATGAAGTACTCT...TGTTCCTCCTAGCTGCTGTGTTGGCTGTCGGCGGCCAGGGTTGAGGACGGCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp GCTCAATTGTGGGCTGAAGTGGGTGGCTCCATCTTTATTGCAAAGGCCGGGCCATCTCCTGTGGCCCTGTaGCCCTCCTGTGGCCGTCAT +
Preference number: 4 (lower is better)
Translates to: AQLWAEVGGSIFIAKAGPSPVAL*PSCGRH
Trigger: ATGACGGCCACAGGAGGGGCACAGGGCCACAGGAGA...TGGCCCGGCCTTTGCAATAAAGATGGAGCCACCCACTTCAGCCCACAATTGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp GCCAGGTACTGTGAGTGCACTTGGGGCACAAGTGCGAAGAGAAAGGCGGGACCCGCTGCTGGGTGGCGTTaGTTCAGTAGAAGGGGATTC +
Preference number: 4 (lower is better)
Translates to: ARYCECTWGTSAKRKAGPAAGWR*FSRRGF
Trigger: GAATCCCCTTCTACTGAAGCAACGCCACCCAGCAGC...GGGTCCCGCCTTTCTCTTCGCACTTGTGCCCCAAGTGCACTCACAGTACCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp GAGGCCGTCCTCAACCCTGGCCGCCGACAGCCAACACAGCAGCTAGGAGGAACACAGCCAGGACTACCCTaGAGATGGTTGTATGTGTCT +
Preference number: 4 (lower is better)
Translates to: EAVLNPGRRQPTQQLGGTQPGLP*RWLYVS
Trigger: AGACACATACAACCATCTGCAGGGTAGTCCTGGCTG...TGTTCCTCCTAGCTGCTGTGTTGGCTGTCGGCGGCCAGGGTTGAGGACGGCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp ATGACATGCCAACAAGGCCTCCTTGAGCCAGGGAGACGCGGCAGCTTTCTGGACAGTTTTGGCAAGACCTaGCTGTCCTGCCTGGTGGGC +
Preference number: 4 (lower is better)
Translates to: MTCQQGLLEPGRRGSFLDSFGKT*LSCLVG
Trigger: GCCCACCAGGCAGGACAGGCAGGTCTTGCCAAAACT...GTCCAGAAAGCTGCCGCGTCTCCCTGGCTCAAGGAGGCCTTGTTGGCATGTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp GCTCAATTGTGGGCTGAAGTGGGTGGCTCCATCTTTATTGCAAAGGCCGGGCCATCAGATTCCTGGACGTaGTCGGGGCCCAGGCCCTCT +
Preference number: 4 (lower is better)
Translates to: AQLWAEVGGSIFIAKAGPSDSWT*SGPRPS
Trigger: AGAGGGCCTGGGCCCCGAGCACGTCCAGGAATCTGA...TGGCCCGGCCTTTGCAATAAAGATGGAGCCACCCACTTCAGCCCACAATTGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp GCCAGGTACTGTGAGTGCACTTGGGGCACAAGTGCGAAGAGAAAGGCGGGACCCGTTCCACTGGGACACTaGCCAGACCTCGCATTAGAC +
Preference number: 4 (lower is better)
Translates to: ARYCECTWGTSAKRKAGPVPLGH*PDLALD
Trigger: GTCTAATGCGAGGTCTGGGCAGTGTCCCAGTGGAAC...GGGTCCCGCCTTTCTCTTCGCACTTGTGCCCCAAGTGCACTCACAGTACCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp GAGGCCGTCCTCAACCCTGGCCGCCGACAGCCAACACAGCAGCTAGGAGGAACACACTACAGCATGACATaGCAATTGCAGTGGAAGGGG +
Preference number: 4 (lower is better)
Translates to: EAVLNPGRRQPTQQLGGTHYSMT*QLQWKG
Trigger: CCCCTTCCACTGCAATTGGCATGTCATGCTGTAGTG...TGTTCCTCCTAGCTGCTGTGTTGGCTGTCGGCGGCCAGGGTTGAGGACGGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp GGAAAGAGTAAGCTCACTTTAACTCAGATTCCTGGACGTGCTCGGGGCCCAGGCGGAGGGGACTTGGCATaGGAGGGCCCTCTCGCCAAA +
Preference number: 4 (lower is better)
Translates to: GKSKLTLTQIPGRARGPGGGDLA*EGPLAK
Trigger: TTTGGCGAGAGGGCCCTCCCATGCCAAGTCCCCTCC...GCCTGGGCCCCGAGCACGTCCAGGAATCTGAGTTAAAGTGAGCTTACTCTTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp CTCCTGGTCACTGCCCTCCTGGCTCCAGCAGAGGTCATGCCCCTTCTCGGTCCTTGCAGTGCACATGACTaGCATGACAGAGATGCTGTG +
Preference number: 4 (lower is better)
Translates to: LLVTALLAPAEVMPLLGPCSAHD*HDRDAV
Trigger: CACAGCATCTCTGTCATGCCAGTCATGTGCACTGCA...AGGACCGAGAAGGGGCATGACCTCTGCTGGAGCCAGGAGGGCAGTGACCAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp CTCCTGGTCACTGCCCTCCTGGCTCCAGCAGAGGTCATGCCCCTTCTCGGTCCTTTTACCCTATCAGGCTaGGAAGTCCCTGAAGGGAGA +
Preference number: 4 (lower is better)
Translates to: LLVTALLAPAEVMPLLGPFTLSG*EVPEGR
Trigger: TCTCCCTTCAGGGACTTCCCAGCCTGATAGGGTAAA...AGGACCGAGAAGGGGCATGACCTCTGCTGGAGCCAGGAGGGCAGTGACCAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp AGTAAGCTCACTTTAACTCAGATTCCTGGACGTGCTCGGGGCCCAGGCCCTCTGGTGCCCCAGGCAATCTaGCCCAGCCAGGATACTGCA +
Preference number: 4 (lower is better)
Translates to: SKLTLTQIPGRARGPGPLVPQAI*PSQDTA
Trigger: TGCAGTATCCTGGCTGGGCCAGATTGCCTGGGGCAC...CAGAGGGCCTGGGCCCCGAGCACGTCCAGGAATCTGAGTTAAAGTGAGCTTACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp GCCAGGTACTGTGAGTGCACTTGGGGCACAAGTGCGAAGAGAAAGGCGGGACCCTATGTGTCTGAGAGGTaGGCAAAGGCAGCCTGGGTC +
Preference number: 4 (lower is better)
Translates to: ARYCECTWGTSAKRKAGPYVSER*AKAAWV
Trigger: GACCCAGGCTGCCTTTGCCCACCTCTCAGACACATA...GGGTCCCGCCTTTCTCTTCGCACTTGTGCCCCAAGTGCACTCACAGTACCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp GAGGCCGTCCTCAACCCTGGCCGCCGACAGCCAACACAGCAGCTAGGAGGAACAGGACTACCCTGCAGATaGTTGTATGTGTCTGAGAGG +
Preference number: 4 (lower is better)
Translates to: EAVLNPGRRQPTQQLGGTGLPCR*LYVSER
Trigger: CCTCTCAGACACATACAACCATCTGCAGGGTAGTCC...TGTTCCTCCTAGCTGCTGTGTTGGCTGTCGGCGGCCAGGGTTGAGGACGGCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp GAGGCCGTCCTCAACCCTGGCCGCCGACAGCCAACACAGCAGCTAGGAGGAACAGATTATGCTCAATTGTaGGCTGAAGTGGGTGGCTCC +
Preference number: 4 (lower is better)
Translates to: EAVLNPGRRQPTQQLGGTDYAQL*AEVGGS
Trigger: GGAGCCACCCACTTCAGCCCACAATTGAGCATAATC...TGTTCCTCCTAGCTGCTGTGTTGGCTGTCGGCGGCCAGGGTTGAGGACGGCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp GAGGCCGTCCTCAACCCTGGCCGCCGACAGCCAACACAGCAGCTAGGAGGAACAGCACTGAGTCTGTTTTaGGCACCTTGCTTTGGGAAG +
Preference number: 4 (lower is better)
Translates to: EAVLNPGRRQPTQQLGGTALSLF*APCFGK
Trigger: CTTCCCAAAGCAAGGTGCCCAAAACAGACTCAGTGC...TGTTCCTCCTAGCTGCTGTGTTGGCTGTCGGCGGCCAGGGTTGAGGACGGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp AGTAAGCTCACTTTAACTCAGATTCCTGGACGTGCTCGGGGCCCAGGCCCTCTGCTCTCAGCCGCCAACTaGAGGAGCCAAGCAACAGGG +
Preference number: 4 (lower is better)
Translates to: SKLTLTQIPGRARGPGPLLSAAN*RSQATG
Trigger: CCCTGTTGCTTGGCTCCTCCAGTTGGCGGCTGAGAG...CAGAGGGCCTGGGCCCCGAGCACGTCCAGGAATCTGAGTTAAAGTGAGCTTACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp GCCAGGTACTGTGAGTGCACTTGGGGCACAAGTGCGAAGAGAAAGGCGGGACCCTCTGGAAAGTTCCACTaGGACACTGCCCAGACCTCG +
Preference number: 4 (lower is better)
Translates to: ARYCECTWGTSAKRKAGPSGKFH*DTAQTS
Trigger: CGAGGTCTGGGCAGTGTCCCAGTGGAACTTTCCAGA...GGGTCCCGCCTTTCTCTTCGCACTTGTGCCCCAAGTGCACTCACAGTACCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR TCA 90 bp CTGATTGAGAAACACTGCCCCATGCCGGCCACCCAAGAGGTCACCCACATGCCACTAGGAGATGTGCCATaGCATGCCAACAAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: LIEKHCPMPATQEVTHMPLGDVP*HANKAS
Trigger: GGAGGCCTTGTTGGCATGTCATGGCACATCTCCTAG...TGGCATGTGGGTGACCTCTTGGGTGGCCGGCATGGGGCAGTGTTTCTCAATCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR TCA 90 bp GGAAAGAGTAAGCTCACTTTAACTCAGATTCCTGGACGTGCTCGGGGCCCAGGCCCTGAATGTGTCCATTaGGGGCATCGGGGGCCTCAG +
Preference number: 4 (lower is better)
Translates to: GKSKLTLTQIPGRARGPGPECVH*GHRGPQ
Trigger: CTGAGGCCCCCGATGCCCTCAATGGACACATTCAGG...GCCTGGGCCCCGAGCACGTCCAGGAATCTGAGTTAAAGTGAGCTTACTCTTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp CCTGGCTTGGGTGGCTTGGGCGAGTCCTGTTCAGCCAGGACTACCCTGCAGATGCAGCCAGGACTACCCTaGAGATGGTTGTATGTGTCT +
Preference number: 4 (lower is better)
Translates to: PGLGGLGESCSARTTLQMQPGLP*RWLYVS
Trigger: AGACACATACAACCATCTGCAGGGTAGTCCTGGCTG...CATCTGCAGGGTAGTCCTGGCTGAACAGGACTCGCCCAAGCCACCCAAGCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp CTGATTGAGAAACACTGCCCCATGCCGGCCACCCAAGAGGTCACCCACATGCCAAGCAGCTGGAGGAGATaGTTCTTCCCCTGTCCTCAG +
Preference number: 4 (lower is better)
Translates to: LIEKHCPMPATQEVTHMPSSWRR*FFPCPQ
Trigger: CTGAGGACAGGGGAAGAAGCATCTCCTCCAGCTGCT...TGGCATGTGGGTGACCTCTTGGGTGGCCGGCATGGGGCAGTGTTTCTCAATCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp AGTAAGCTCACTTTAACTCAGATTCCTGGACGTGCTCGGGGCCCAGGCCCTCTGAGAAACACTGCCCCATaGCGGCCACCCAAGAGGTCA +
Preference number: 4 (lower is better)
Translates to: SKLTLTQIPGRARGPGPLRNTAP*RPPKRS
Trigger: TGACCTCTTGGGTGGCCGGCATGGGGCAGTGTTTCT...CAGAGGGCCTGGGCCCCGAGCACGTCCAGGAATCTGAGTTAAAGTGAGCTTACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp CTGATTGAGAAACACTGCCCCATGCCGGCCACCCAAGAGGTCACCCACATGCCACTGATTGAGAAACACTaGCCCATGCCGGCCACCCAA +
Preference number: 4 (lower is better)
Translates to: LIEKHCPMPATQEVTHMPLIEKH*PMPATQ
Trigger: TTGGGTGGCCGGCATGGGGCAGTGTTTCTCAATCAG...TGGCATGTGGGTGACCTCTTGGGTGGCCGGCATGGGGCAGTGTTTCTCAATCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp GCTCAATTGTGGGCTGAAGTGGGTGGCTCCATCTTTATTGCAAAGGCCGGGCCAATCGTGCCACTGCACTaGACTCCAGCCTGGCGAGAG +
Preference number: 4 (lower is better)
Translates to: AQLWAEVGGSIFIAKAGPIVPLH*TPAWRE
Trigger: CTCTCGCCAGGCTGGAGTGCAGTGCAGTGGCACGAT...TGGCCCGGCCTTTGCAATAAAGATGGAGCCACCCACTTCAGCCCACAATTGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp GCCAGGTACTGTGAGTGCACTTGGGGCACAAGTGCGAAGAGAAAGGCGGGACCCTTTACCCACTTATCTTaGCTCCCACAGGCGGGCGAT +
Preference number: 4 (lower is better)
Translates to: ARYCECTWGTSAKRKAGPFTHLS*LPQAGD
Trigger: ATCGCCCGCCTGTGGGAGGCAAGATAAGTGGGTAAA...GGGTCCCGCCTTTCTCTTCGCACTTGTGCCCCAAGTGCACTCACAGTACCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp CCTGGCTTGGGTGGCTTGGGCGAGTCCTGTTCAGCCAGGACTACCCTGCAGATGCACTACAGCATGACATaGCAATTGCAGTGGAAGGGG +
Preference number: 4 (lower is better)
Translates to: PGLGGLGESCSARTTLQMHYSMT*QLQWKG
Trigger: CCCCTTCCACTGCAATTGGCATGTCATGCTGTAGTG...CATCTGCAGGGTAGTCCTGGCTGAACAGGACTCGCCCAAGCCACCCAAGCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp CCTGGCTTGGGTGGCTTGGGCGAGTCCTGTTCAGCCAGGACTACCCTGCAGATGTGCAGTGCACATGACTaGCATGACAGAGATGCTGTG +
Preference number: 4 (lower is better)
Translates to: PGLGGLGESCSARTTLQMCSAHD*HDRDAV
Trigger: CACAGCATCTCTGTCATGCCAGTCATGTGCACTGCA...CATCTGCAGGGTAGTCCTGGCTGAACAGGACTCGCCCAAGCCACCCAAGCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp AAGATCAGACATCTGAAATCTGTGAAGCACCGGTTTCGACCTCGGGGATTCCTCCTGCCAGCCCCGGAGTaGACCAGGCTGCAGAACCCC +
Preference number: 4 (lower is better)
Translates to: KIRHLKSVKHRFRPRGFLLPAPE*TRLQNP
Trigger: GGGGTTCTGCAGCCTGGTCCACTCCGGGGCTGGCAG...GAGGAATCCCCGAGGTCGAAACCGGTGCTTCACAGATTTCAGATGTCTGATCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp CTGATTGAGAAACACTGCCCCATGCCGGCCACCCAAGAGGTCACCCACATGCCATATGTGTCTGAGAGGTaGGCAAAGGCAGCCTGGGTC +
Preference number: 4 (lower is better)
Translates to: LIEKHCPMPATQEVTHMPYVSER*AKAAWV
Trigger: GACCCAGGCTGCCTTTGCCCACCTCTCAGACACATA...TGGCATGTGGGTGACCTCTTGGGTGGCCGGCATGGGGCAGTGTTTCTCAATCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp GCTCAATTGTGGGCTGAAGTGGGTGGCTCCATCTTTATTGCAAAGGCCGGGCCACTGGCTTGGGTGGCTTaGGCGAGTCCTGTTCAGCCA +
Preference number: 4 (lower is better)
Translates to: AQLWAEVGGSIFIAKAGPLAWVA*ASPVQP
Trigger: TGGCTGAACAGGACTCGCCCAAGCCACCCAAGCCAG...TGGCCCGGCCTTTGCAATAAAGATGGAGCCACCCACTTCAGCCCACAATTGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp CCTGGCTTGGGTGGCTTGGGCGAGTCCTGTTCAGCCAGGACTACCCTGCAGATGGATTATGCTCAATTGTaGGCTGAAGTGGGTGGCTCC +
Preference number: 4 (lower is better)
Translates to: PGLGGLGESCSARTTLQMDYAQL*AEVGGS
Trigger: GGAGCCACCCACTTCAGCCCACAATTGAGCATAATC...CATCTGCAGGGTAGTCCTGGCTGAACAGGACTCGCCCAAGCCACCCAAGCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp GCCAGGTACTGTGAGTGCACTTGGGGCACAAGTGCGAAGAGAAAGGCGGGACCCGACGCGGCAGCTTTCTaGACTTTTCAAGCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: ARYCECTWGTSAKRKAGPDAAAF*TFQAGG
Trigger: TCCACCTGCTTGAAAAGTCCAGAAAGCTGCCGCGTC...GGGTCCCGCCTTTCTCTTCGCACTTGTGCCCCAAGTGCACTCACAGTACCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp GGAAAGAGTAAGCTCACTTTAACTCAGATTCCTGGACGTGCTCGGGGCCCAGGCAGGCGGAGGTTGCAGTaGGCTGAGATCGTGCCACTG +
Preference number: 4 (lower is better)
Translates to: GKSKLTLTQIPGRARGPGRRRLQ*AEIVPL
Trigger: CAGTGGCACGATCTCAGCCCACTGCAACCTCCGCCT...GCCTGGGCCCCGAGCACGTCCAGGAATCTGAGTTAAAGTGAGCTTACTCTTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp AAGCCATATGCACATCTGCCCCACTTCCCTAAAGCACTGAGTCTGTTTTGGGCACGCGTCCCCACTCGCTaGGCCACGACCTGGCTTGGA +
Preference number: 4 (lower is better)
Translates to: KPYAHLPHFPKALSLFWARVPTR*ATTWLG
Trigger: TCCAAGCCAGGTCGTGGCCCAGCGAGTGGGGACGCG...TGCCCAAAACAGACTCAGTGCTTTAGGGAAGTGGGGCAGATGTGCATATGGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000405109.5
ENST00000407609.7
3UTR CAA 72 bp GGGGCCAACCTACGCTGGGTCTCCTGGTCCCTCTCCTaGGTGGCAGAAATAGGTTTCCAACAGGCTCCAGTT +
Preference number: 4 (lower is better)
Translates to: GANLRWVSWSLS*VAEIGFQQAPV
Trigger: AACTGGAGCCTGTTGGAAACCTATTTCTGCCACCAAGGAGAGGGACCAGGAGACCCAGCGTAGGTTGGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR TCA 90 bp CATCTGAAATCTGTGAAGCACCGGTTTCGACCTCGGGGATTCCTCAGAAGAAGTCCCACCCTCCCGAGTTaGGCCTACTTGGGGCCAACC +
Preference number: 4 (lower is better)
Translates to: HLKSVKHRFRPRGFLRRSPTLPS*AYLGPT
Trigger: GGTTGGCCCCAAGTAGGCTCAACTCGGGAGGGTGGG...ACTTCTTCTGAGGAATCCCCGAGGTCGAAACCGGTGCTTCACAGATTTCAGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR TCA 90 bp AAGATCAGACATCTGAAATCTGTGAAGCACCGGTTTCGACCTCGGGGATTCCTCCCCACCCTCCCGAGTTaGGCCTACTTGGGGCCAACC +
Preference number: 4 (lower is better)
Translates to: KIRHLKSVKHRFRPRGFLPTLPS*AYLGPT
Trigger: GGTTGGCCCCAAGTAGGCTCAACTCGGGAGGGTGGG...GAGGAATCCCCGAGGTCGAAACCGGTGCTTCACAGATTTCAGATGTCTGATCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR TCA 90 bp TGTTTCCATGAACTCATCATTGACTGCACCCATGGGACCACTTCCTCCTCATCCCCAACAAGGCCTCCTTaGGCCAGGGAGACGCGGCAG +
Preference number: 4 (lower is better)
Translates to: CFHELIIDCTHGTTSSSSPTRPP*ARETRQ
Trigger: CTGCCGCGTCTCCCTGGCTCAAGGAGGCCTTGTTGG...GGATGAGGAGGAAGTGGTCCCATGGGTGCAGTCAATGATGAGTTCATGGAAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp GGAAAGAGTAAGCTCACTTTAACTCAGATTCCTGGACGTGCTCGGGGCCCAGGCATGCTCCCCACCCAGTaGCCAGCACACACTGCTTCT +
Preference number: 4 (lower is better)
Translates to: GKSKLTLTQIPGRARGPGMLPTQ*PAHTAS
Trigger: AGAAGCAGTGTGTGCTGGGCACTGGGTGGGGAGCAT...GCCTGGGCCCCGAGCACGTCCAGGAATCTGAGTTAAAGTGAGCTTACTCTTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp GCTCAATTGTGGGCTGAAGTGGGTGGCTCCATCTTTATTGCAAAGGCCGGGCCAAGTTTTGGCAAGACCTaGCTGTCCTGCCTGGTGGGC +
Preference number: 4 (lower is better)
Translates to: AQLWAEVGGSIFIAKAGPSFGKT*LSCLVG
Trigger: GCCCACCAGGCAGGACAGGCAGGTCTTGCCAAAACT...TGGCCCGGCCTTTGCAATAAAGATGGAGCCACCCACTTCAGCCCACAATTGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp GCTCAATTGTGGGCTGAAGTGGGTGGCTCCATCTTTATTGCAAAGGCCGGGCCAGCCAGGTACTGTGAGTaGACTTGGGGCACAAGTGCG +
Preference number: 4 (lower is better)
Translates to: AQLWAEVGGSIFIAKAGPARYCE*TWGTSA
Trigger: CGCACTTGTGCCCCAAGTGCACTCACAGTACCTGGC...TGGCCCGGCCTTTGCAATAAAGATGGAGCCACCCACTTCAGCCCACAATTGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp AGTAAGCTCACTTTAACTCAGATTCCTGGACGTGCTCGGGGCCCAGGCCCTCTGCTGATTGAGAAACACTaGCCCATGCCGGCCACCCAA +
Preference number: 4 (lower is better)
Translates to: SKLTLTQIPGRARGPGPLLIEKH*PMPATQ
Trigger: TTGGGTGGCCGGCATGGGGCAGTGTTTCTCAATCAG...CAGAGGGCCTGGGCCCCGAGCACGTCCAGGAATCTGAGTTAAAGTGAGCTTACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp AGTAAGCTCACTTTAACTCAGATTCCTGGACGTGCTCGGGGCCCAGGCCCTCTGGTTCCACTGGGACACTaGCCAGACCTCGCATTAGAC +
Preference number: 4 (lower is better)
Translates to: SKLTLTQIPGRARGPGPLVPLGH*PDLALD
Trigger: GTCTAATGCGAGGTCTGGGCAGTGTCCCAGTGGAAC...CAGAGGGCCTGGGCCCCGAGCACGTCCAGGAATCTGAGTTAAAGTGAGCTTACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp TGTTTCCATGAACTCATCATTGACTGCACCCATGGGACCACTTCCTCCTCATCCGCCCTCCAGCCACTGTaGGCCTGCGCACCTATTCCC +
Preference number: 4 (lower is better)
Translates to: CFHELIIDCTHGTTSSSSALQPL*ACAPIP
Trigger: GGGAATAGGTGCGCAGGCGCACAGTGGCTGGAGGGC...GGATGAGGAGGAAGTGGTCCCATGGGTGCAGTCAATGATGAGTTCATGGAAACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405109.5
CDS-3UTR GCA 90 bp GCTCAATTGTGGGCTGAAGTGGGTGGCTCCATCTTTATTGCAAAGGCCGGGCCAATCATGATACGAAGGTaGTGCCTGGTTCGGGGCGCG +
Preference number: 4 (lower is better)
Translates to: AQLWAEVGGSIFIAKAGPIMIRR*CLVRGA
Trigger: CGCGCCCCGAACCAGGCAGCACCTTCGTATCATGAT...TGGCCCGGCCTTTGCAATAAAGATGGAGCCACCCACTTCAGCCCACAATTGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407609.7
CDS-3UTR CCA 90 bp GCCAGGTACTGTGAGTGCACTTGGGGCACAAGTGCGAAGAGAAAGGCGGGACCCCCAAAAGTCCCCATCTaGGTTGTAGATCTCCACCAC +
Preference number: 4 (lower is better)
Translates to: ARYCECTWGTSAKRKAGPPKVPI*VVDLHH
Trigger: GTGGTGGAGATCTACAACCCAGATGGGGACTTTTGG...GGGTCCCGCCTTTCTCTTCGCACTTGTGCCCCAAGTGCACTCACAGTACCTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp GAGGCCGTCCTCAACCCTGGCCGCCGACAGCCAACACAGCAGCTAGGAGGAACACCACTGGTTTTCCCATaGGTCCAGTTCCAATATTTC +
Preference number: 4 (lower is better)
Translates to: EAVLNPGRRQPTQQLGGTPLVFP*VQFQYF
Trigger: GAAATATTGGAACTGGACCCATGGGAAAACCAGTGG...TGTTCCTCCTAGCTGCTGTGTTGGCTGTCGGCGGCCAGGGTTGAGGACGGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp GCTCAATTGTGGGCTGAAGTGGGTGGCTCCATCTTTATTGCAAAGGCCGGGCCACCAGGGCAGGATTCTTaGCCACTGTGGTCTGGCTTG +
Preference number: 4 (lower is better)
Translates to: AQLWAEVGGSIFIAKAGPPGQDS*PLWSGL
Trigger: CAAGCCAGACCACAGTGGCCAAGAATCCTGCCCTGG...TGGCCCGGCCTTTGCAATAAAGATGGAGCCACCCACTTCAGCCCACAATTGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp CATCTGAAATCTGTGAAGCACCGGTTTCGACCTCGGGGATTCCTCAGAAGAAGTGCAAAGGCCGGGCCATaGGGTTGGCAGCAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: HLKSVKHRFRPRGFLRRSAKAGP*GWQQLE
Trigger: CTCCAGCTGCTGCCAACCCCATGGCCCGGCCTTTGC...ACTTCTTCTGAGGAATCCCCGAGGTCGAAACCGGTGCTTCACAGATTTCAGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp AAGCCATATGCACATCTGCCCCACTTCCCTAAAGCACTGAGTCTGTTTTGGGCAGCAAAGGCCGGGCCATaGGGTTGGCAGCAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: KPYAHLPHFPKALSLFWAAKAGP*GWQQLE
Trigger: CTCCAGCTGCTGCCAACCCCATGGCCCGGCCTTTGC...TGCCCAAAACAGACTCAGTGCTTTAGGGAAGTGGGGCAGATGTGCATATGGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp TTGGTGGCAGAAATAGGTTTCCAACAGGCTCCAGTTTTGGCAAGACCTGCCTGTGGGGCCAACCTACGCTaGGTCTCCTGGTCCCTCTCC +
Preference number: 4 (lower is better)
Translates to: LVAEIGFQQAPVLARPACGANLR*VSWSLS
Trigger: GGAGAGGGACCAGGAGACCCAGCGTAGGTTGGCCCC...ACAGGCAGGTCTTGCCAAAACTGGAGCCTGTTGGAAACCTATTTCTGCCACCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp ATGACATGCCAACAAGGCCTCCTTGAGCCAGGGAGACGCGGCAGCTTTCTGGACAGCAGGTGGAGCAGGTaGAGTGACTATGTGAAGAGG +
Preference number: 4 (lower is better)
Translates to: MTCQQGLLEPGRRGSFLDSRWSR*SDYVKR
Trigger: CCTCTTCACATAGTCACTCCACCTGCTCCACCTGCT...GTCCAGAAAGCTGCCGCGTCTCCCTGGCTCAAGGAGGCCTTGTTGGCATGTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp CTGATTGAGAAACACTGCCCCATGCCGGCCACCCAAGAGGTCACCCACATGCCAGACGCGGCAGCTTTCTaGACTTTTCAAGCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: LIEKHCPMPATQEVTHMPDAAAF*TFQAGG
Trigger: TCCACCTGCTTGAAAAGTCCAGAAAGCTGCCGCGTC...TGGCATGTGGGTGACCTCTTGGGTGGCCGGCATGGGGCAGTGTTTCTCAATCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp ATGACATGCCAACAAGGCCTCCTTGAGCCAGGGAGACGCGGCAGCTTTCTGGACGACGCGGCAGCTTTCTaGACTTTTCAAGCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: MTCQQGLLEPGRRGSFLDDAAAF*TFQAGG
Trigger: TCCACCTGCTTGAAAAGTCCAGAAAGCTGCCGCGTC...GTCCAGAAAGCTGCCGCGTCTCCCTGGCTCAAGGAGGCCTTGTTGGCATGTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR TCA 90 bp GCTCAATTGTGGGCTGAAGTGGGTGGCTCCATCTTTATTGCAAAGGCCGGGCCACTACTTTTCCAGCCTTaGCCACAAACCCTGTGCCCC +
Preference number: 4 (lower is better)
Translates to: AQLWAEVGGSIFIAKAGPLLFQP*PQTLCP
Trigger: GGGGCACAGGGTTTGTGGTCAAGGCTGGAAAAGTAG...TGGCCCGGCCTTTGCAATAAAGATGGAGCCACCCACTTCAGCCCACAATTGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR TCA 90 bp GGAAAGAGTAAGCTCACTTTAACTCAGATTCCTGGACGTGCTCGGGGCCCAGGCACATGCCAGGTACTGTaGGTGCACTTGGGGCACAAG +
Preference number: 4 (lower is better)
Translates to: GKSKLTLTQIPGRARGPGTCQVL*VHLGHK
Trigger: CTTGTGCCCCAAGTGCACTCACAGTACCTGGCATGT...GCCTGGGCCCCGAGCACGTCCAGGAATCTGAGTTAAAGTGAGCTTACTCTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR TCA 90 bp GCTCAATTGTGGGCTGAAGTGGGTGGCTCCATCTTTATTGCAAAGGCCGGGCCAACATGCCAGGTACTGTaGGTGCACTTGGGGCACAAG +
Preference number: 4 (lower is better)
Translates to: AQLWAEVGGSIFIAKAGPTCQVL*VHLGHK
Trigger: CTTGTGCCCCAAGTGCACTCACAGTACCTGGCATGT...TGGCCCGGCCTTTGCAATAAAGATGGAGCCACCCACTTCAGCCCACAATTGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR TCA 90 bp AAGATCAGACATCTGAAATCTGTGAAGCACCGGTTTCGACCTCGGGGATTCCTCGGGGCCCAGGCCCTCTaGTTGAGAAACACTGCCCCA +
Preference number: 4 (lower is better)
Translates to: KIRHLKSVKHRFRPRGFLGAQAL*LRNTAP
Trigger: TGGGGCAGTGTTTCTCAATCAGAGGGCCTGGGCCCC...GAGGAATCCCCGAGGTCGAAACCGGTGCTTCACAGATTTCAGATGTCTGATCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR TCA 90 bp TTTGGGAGTGACTGTCTTCTGATTATGCTCAATTGTGGGCTGAAGTGGGTGGCTCCAACAAGGCCTCCTTaGGCCAGGGAGACGCGGCAG +
Preference number: 4 (lower is better)
Translates to: FGSDCLLIMLNCGLKWVAPTRPP*ARETRQ
Trigger: CTGCCGCGTCTCCCTGGCTCAAGGAGGCCTTGTTGG...AGCCACCCACTTCAGCCCACAATTGAGCATAATCAGAAGACAGTCACTCCCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp CTCCTGGTCACTGCCCTCCTGGCTCCAGCAGAGGTCATGCCCCTTCTCGGTCCTTGGCTGGGGTCATACTaGAACAGTTTGTTGCTTAAT +
Preference number: 4 (lower is better)
Translates to: LLVTALLAPAEVMPLLGPWLGSY*NSLLLN
Trigger: ATTAAGCAACAAACTGTTGCAGTATGACCCCAGCCA...AGGACCGAGAAGGGGCATGACCTCTGCTGGAGCCAGGAGGGCAGTGACCAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp GAGGCCGTCCTCAACCCTGGCCGCCGACAGCCAACACAGCAGCTAGGAGGAACAGACCTACACAGCCAATaGCACCCAAAACATAAATCT +
Preference number: 4 (lower is better)
Translates to: EAVLNPGRRQPTQQLGGTDLHSQ*HPKHKS
Trigger: AGATTTATGTTTTGGGTGGCATTGGCTGTGTAGGTC...TGTTCCTCCTAGCTGCTGTGTTGGCTGTCGGCGGCCAGGGTTGAGGACGGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp TGTTTCCATGAACTCATCATTGACTGCACCCATGGGACCACTTCCTCCTCATCCTCTCCTGTGGCCCTGTaGCCCTCCTGTGGCCGTCAT +
Preference number: 4 (lower is better)
Translates to: CFHELIIDCTHGTTSSSSSPVAL*PSCGRH
Trigger: ATGACGGCCACAGGAGGGGCACAGGGCCACAGGAGA...GGATGAGGAGGAAGTGGTCCCATGGGTGCAGTCAATGATGAGTTCATGGAAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp CTGATTGAGAAACACTGCCCCATGCCGGCCACCCAAGAGGTCACCCACATGCCACAGCCAGGACTACCCTaGAGATGGTTGTATGTGTCT +
Preference number: 4 (lower is better)
Translates to: LIEKHCPMPATQEVTHMPQPGLP*RWLYVS
Trigger: AGACACATACAACCATCTGCAGGGTAGTCCTGGCTG...TGGCATGTGGGTGACCTCTTGGGTGGCCGGCATGGGGCAGTGTTTCTCAATCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp GCTCAATTGTGGGCTGAAGTGGGTGGCTCCATCTTTATTGCAAAGGCCGGGCCAAGCAGCTGGAGGAGATaGTTCTTCCCCTGTCCTCAG +
Preference number: 4 (lower is better)
Translates to: AQLWAEVGGSIFIAKAGPSSWRR*FFPCPQ
Trigger: CTGAGGACAGGGGAAGAAGCATCTCCTCCAGCTGCT...TGGCCCGGCCTTTGCAATAAAGATGGAGCCACCCACTTCAGCCCACAATTGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp GGAAAGAGTAAGCTCACTTTAACTCAGATTCCTGGACGTGCTCGGGGCCCAGGCTGGCTCCATCTTTATTaGAAAGGCCGGGCCATGGGG +
Preference number: 4 (lower is better)
Translates to: GKSKLTLTQIPGRARGPGWLHLY*KGRAMG
Trigger: CCCCATGGCCCGGCCTTTGCAATAAAGATGGAGCCA...GCCTGGGCCCCGAGCACGTCCAGGAATCTGAGTTAAAGTGAGCTTACTCTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp CCTGGCTTGGGTGGCTTGGGCGAGTCCTGTTCAGCCAGGACTACCCTGCAGATGTTTACTGACCACTCCTaGTTCCAAAAGAGCCTTGTG +
Preference number: 4 (lower is better)
Translates to: PGLGGLGESCSARTTLQMFTDHS*FQKSLV
Trigger: CACAAGGCTCTTTTGGAAGCAGGAGTGGTCAGTAAA...CATCTGCAGGGTAGTCCTGGCTGAACAGGACTCGCCCAAGCCACCCAAGCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp CTGATTGAGAAACACTGCCCCATGCCGGCCACCCAAGAGGTCACCCACATGCCAAGATGTGCCATGACATaGCAACAAGGCCTCCTTGAG +
Preference number: 4 (lower is better)
Translates to: LIEKHCPMPATQEVTHMPRCAMT*QQGLLE
Trigger: CTCAAGGAGGCCTTGTTGGCATGTCATGGCACATCT...TGGCATGTGGGTGACCTCTTGGGTGGCCGGCATGGGGCAGTGTTTCTCAATCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp TTGGTGGCAGAAATAGGTTTCCAACAGGCTCCAGTTTTGGCAAGACCTGCCTGTCTGGGAGGCGGAGGTTaGAGTGGGCTGAGATCGTGC +
Preference number: 4 (lower is better)
Translates to: LVAEIGFQQAPVLARPACLGGGG*SGLRSC
Trigger: GCACGATCTCAGCCCACTGCAACCTCCGCCTCCCAG...ACAGGCAGGTCTTGCCAAAACTGGAGCCTGTTGGAAACCTATTTCTGCCACCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp TGTTTCCATGAACTCATCATTGACTGCACCCATGGGACCACTTCCTCCTCATCCCTGGGAGGCGGAGGTTaGAGTGGGCTGAGATCGTGC +
Preference number: 4 (lower is better)
Translates to: CFHELIIDCTHGTTSSSSLGGGG*SGLRSC
Trigger: GCACGATCTCAGCCCACTGCAACCTCCGCCTCCCAG...GGATGAGGAGGAAGTGGTCCCATGGGTGCAGTCAATGATGAGTTCATGGAAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp AAGCCATATGCACATCTGCCCCACTTCCCTAAAGCACTGAGTCTGTTTTGGGCACTGGGAGGCGGAGGTTaGAGTGGGCTGAGATCGTGC +
Preference number: 4 (lower is better)
Translates to: KPYAHLPHFPKALSLFWALGGGG*SGLRSC
Trigger: GCACGATCTCAGCCCACTGCAACCTCCGCCTCCCAG...TGCCCAAAACAGACTCAGTGCTTTAGGGAAGTGGGGCAGATGTGCATATGGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp AGTAAGCTCACTTTAACTCAGATTCCTGGACGTGCTCGGGGCCCAGGCCCTCTGTTTACCCACTTATCTTaGCTCCCACAGGCGGGCGAT +
Preference number: 4 (lower is better)
Translates to: SKLTLTQIPGRARGPGPLFTHLS*LPQAGD
Trigger: ATCGCCCGCCTGTGGGAGGCAAGATAAGTGGGTAAA...CAGAGGGCCTGGGCCCCGAGCACGTCCAGGAATCTGAGTTAAAGTGAGCTTACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp AGTAAGCTCACTTTAACTCAGATTCCTGGACGTGCTCGGGGCCCAGGCCCTCTGCTAACGATATCTGGCTaGAGGTGGGGAGGGTCATGT +
Preference number: 4 (lower is better)
Translates to: SKLTLTQIPGRARGPGPLLTISG*RWGGSC
Trigger: ACATGACCCTCCCCACCTGCAGCCAGATATCGTTAG...CAGAGGGCCTGGGCCCCGAGCACGTCCAGGAATCTGAGTTAAAGTGAGCTTACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp GAGGCCGTCCTCAACCCTGGCCGCCGACAGCCAACACAGCAGCTAGGAGGAACAGGTCATTATGAATACTaGCCAGAGCATAGAGTTCTC +
Preference number: 4 (lower is better)
Translates to: EAVLNPGRRQPTQQLGGTGHYEY*PEHRVL
Trigger: GAGAACTCTATGCTCTGGGCAGTATTCATAATGACC...TGTTCCTCCTAGCTGCTGTGTTGGCTGTCGGCGGCCAGGGTTGAGGACGGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp AAGCCATATGCACATCTGCCCCACTTCCCTAAAGCACTGAGTCTGTTTTGGGCACGAGGGGACAGGTGCTaGCCTCTGCTTGGAAGTGGC +
Preference number: 4 (lower is better)
Translates to: KPYAHLPHFPKALSLFWARGDRC*PLLGSG
Trigger: GCCACTTCCAAGCAGAGGGCAGCACCTGTCCCCTCG...TGCCCAAAACAGACTCAGTGCTTTAGGGAAGTGGGGCAGATGTGCATATGGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000405109.5
CDS-3UTR CCA 90 bp GGAAAGAGTAAGCTCACTTTAACTCAGATTCCTGGACGTGCTCGGGGCCCAGGCCTGCCCCTGCATTGGTaGAATTGGTGCGGAGTGAGA +
Preference number: 4 (lower is better)
Translates to: GKSKLTLTQIPGRARGPGLPLHW*NWCGVR
Trigger: TCTCACTCCGCACCAATTCCACCAATGCAGGGGCAG...GCCTGGGCCCCGAGCACGTCCAGGAATCTGAGTTAAAGTGAGCTTACTCTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp GCCAGGTACTGTGAGTGCACTTGGGGCACAAGTGCGAAGAGAAAGGCGGGACCCGCTACAACATTCCACTaGTTTTCCCATGGGTCCAGT +
Preference number: 4 (lower is better)
Translates to: ARYCECTWGTSAKRKAGPATTFH*FSHGSS
Trigger: ACTGGACCCATGGGAAAACCAGTGGAATGTTGTAGC...GGGTCCCGCCTTTCTCTTCGCACTTGTGCCCCAAGTGCACTCACAGTACCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp CCTGGCTTGGGTGGCTTGGGCGAGTCCTGTTCAGCCAGGACTACCCTGCAGATGTTTGAGACAATTCCCTaGCTTACAGACCAGGTCCAA +
Preference number: 4 (lower is better)
Translates to: PGLGGLGESCSARTTLQMFETIP*LTDQVQ
Trigger: TTGGACCTGGTCTGTAAGCCAGGGAATTGTCTCAAA...CATCTGCAGGGTAGTCCTGGCTGAACAGGACTCGCCCAAGCCACCCAAGCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp TTGGTGGCAGAAATAGGTTTCCAACAGGCTCCAGTTTTGGCAAGACCTGCCTGTTGGGCAAAGGCAGCCTaGGTCAGCCCACTCCAGGAC +
Preference number: 4 (lower is better)
Translates to: LVAEIGFQQAPVLARPACWAKAA*VSPLQD
Trigger: GTCCTGGAGTGGGCTGACCCAGGCTGCCTTTGCCCA...ACAGGCAGGTCTTGCCAAAACTGGAGCCTGTTGGAAACCTATTTCTGCCACCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp ATGAACTCATCATTGACTGCACCCATGGGACCACTTCCTCCTCATCCTTTTGGGTGGGCAAAGGCAGCCTaGGTCAGCCCACTCCAGGAC +
Preference number: 4 (lower is better)
Translates to: MNSSLTAPMGPLPPHPFGWAKAA*VSPLQD
Trigger: GTCCTGGAGTGGGCTGACCCAGGCTGCCTTTGCCCA...CCCAAAAGGATGAGGAGGAAGTGGTCCCATGGGTGCAGTCAATGATGAGTTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp CCTGGCTTGGGTGGCTTGGGCGAGTCCTGTTCAGCCAGGACTACCCTGCAGATGAATTGTGGGCTGAAGTaGGTGGCTCCATCTTTATTG +
Preference number: 4 (lower is better)
Translates to: PGLGGLGESCSARTTLQMNCGLK*VAPSLL
Trigger: CAATAAAGATGGAGCCACCCACTTCAGCCCACAATT...CATCTGCAGGGTAGTCCTGGCTGAACAGGACTCGCCCAAGCCACCCAAGCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp ATGACATGCCAACAAGGCCTCCTTGAGCCAGGGAGACGCGGCAGCTTTCTGGACTTGGGCACCTTGCTTTaGGAAGTGCTGACTGCAATG +
Preference number: 4 (lower is better)
Translates to: MTCQQGLLEPGRRGSFLDLGTLL*EVLTAM
Trigger: CATTGCAGTCAGCACTTCCCAAAGCAAGGTGCCCAA...GTCCAGAAAGCTGCCGCGTCTCCCTGGCTCAAGGAGGCCTTGTTGGCATGTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR TCA 90 bp TGTTTCCATGAACTCATCATTGACTGCACCCATGGGACCACTTCCTCCTCATCCAGGCTGGGAAGTCCCTaGAGGGAGACTCCCCATGCT +
Preference number: 4 (lower is better)
Translates to: CFHELIIDCTHGTTSSSSRLGSP*RETPHA
Trigger: AGCATGGGGAGTCTCCCTTCAGGGACTTCCCAGCCT...GGATGAGGAGGAAGTGGTCCCATGGGTGCAGTCAATGATGAGTTCATGGAAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR TCA 90 bp GCTCAATTGTGGGCTGAAGTGGGTGGCTCCATCTTTATTGCAAAGGCCGGGCCATGCTCAATTGTGGGCTaGAGTGGGTGGCTCCATCTT +
Preference number: 4 (lower is better)
Translates to: AQLWAEVGGSIFIAKAGPCSIVG*SGWLHL
Trigger: AAGATGGAGCCACCCACTTCAGCCCACAATTGAGCA...TGGCCCGGCCTTTGCAATAAAGATGGAGCCACCCACTTCAGCCCACAATTGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR TCA 90 bp AAGCCATATGCACATCTGCCCCACTTCCCTAAAGCACTGAGTCTGTTTTGGGCACCCAGGCCCTCTGATTaGGAAACACTGCCCCATGCC +
Preference number: 4 (lower is better)
Translates to: KPYAHLPHFPKALSLFWAPRPSD*ETLPHA
Trigger: GGCATGGGGCAGTGTTTCTCAATCAGAGGGCCTGGG...TGCCCAAAACAGACTCAGTGCTTTAGGGAAGTGGGGCAGATGTGCATATGGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR TCA 90 bp ATGAACTCATCATTGACTGCACCCATGGGACCACTTCCTCCTCATCCTTTTGGGCCCAGGCCCTCTGATTaGGAAACACTGCCCCATGCC +
Preference number: 4 (lower is better)
Translates to: MNSSLTAPMGPLPPHPFGPRPSD*ETLPHA
Trigger: GGCATGGGGCAGTGTTTCTCAATCAGAGGGCCTGGG...CCCAAAAGGATGAGGAGGAAGTGGTCCCATGGGTGCAGTCAATGATGAGTTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR TCA 90 bp TTTGGGAGTGACTGTCTTCTGATTATGCTCAATTGTGGGCTGAAGTGGGTGGCTGGGGCCCAGGCCCTCTaGTTGAGAAACACTGCCCCA +
Preference number: 4 (lower is better)
Translates to: FGSDCLLIMLNCGLKWVAGAQAL*LRNTAP
Trigger: TGGGGCAGTGTTTCTCAATCAGAGGGCCTGGGCCCC...AGCCACCCACTTCAGCCCACAATTGAGCATAATCAGAAGACAGTCACTCCCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR TCA 90 bp AGTAAGCTCACTTTAACTCAGATTCCTGGACGTGCTCGGGGCCCAGGCCCTCTGACGAGGTCAAGAGATTaGGACCATCCTGGCCAACAT +
Preference number: 4 (lower is better)
Translates to: SKLTLTQIPGRARGPGPLTRSRD*DHPGQH
Trigger: ATGTTGGCCAGGATGGTCTCAATCTCTTGACCTCGT...CAGAGGGCCTGGGCCCCGAGCACGTCCAGGAATCTGAGTTAAAGTGAGCTTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR TCA 90 bp CATCTGAAATCTGTGAAGCACCGGTTTCGACCTCGGGGATTCCTCAGAAGAAGTTGGTCTCACCTAGCGTaGCCCTCAGGTGCCTCTGCT +
Preference number: 4 (lower is better)
Translates to: HLKSVKHRFRPRGFLRRSWSHLA*PSGASA
Trigger: AGCAGAGGCACCTGAGGGTCACGCTAGGTGAGACCA...ACTTCTTCTGAGGAATCCCCGAGGTCGAAACCGGTGCTTCACAGATTTCAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR TCA 90 bp CTCCTGGTCACTGCCCTCCTGGCTCCAGCAGAGGTCATGCCCCTTCTCGGTCCTGTACATTGGCATTATTaGTCTCCAAAGCTGCATTGT +
Preference number: 4 (lower is better)
Translates to: LLVTALLAPAEVMPLLGPVHWHY*SPKLHC
Trigger: ACAATGCAGCTTTGGAGATCAATAATGCCAATGTAC...AGGACCGAGAAGGGGCATGACCTCTGCTGGAGCCAGGAGGGCAGTGACCAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405109.5
ENST00000405256.5
CDS-3UTR TCA 90 bp GAGGCCGTCCTCAACCCTGGCCGCCGACAGCCAACACAGCAGCTAGGAGGAACATCCTATGTCTTGATCTaGTTCCTGAAGAATTGTTGC +
Preference number: 4 (lower is better)
Translates to: EAVLNPGRRQPTQQLGGTSYVLI*FLKNCC
Trigger: GCAACAATTCTTCAGGAATCAGATCAAGACATAGGA...TGTTCCTCCTAGCTGCTGTGTTGGCTGTCGGCGGCCAGGGTTGAGGACGGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405109.5
ENST00000405256.5
CDS-3UTR GCA 90 bp CCTGGCTTGGGTGGCTTGGGCGAGTCCTGTTCAGCCAGGACTACCCTGCAGATGGACCTACACAGCCAATaGCACCCAAAACATAAATCT +
Preference number: 4 (lower is better)
Translates to: PGLGGLGESCSARTTLQMDLHSQ*HPKHKS
Trigger: AGATTTATGTTTTGGGTGGCATTGGCTGTGTAGGTC...CATCTGCAGGGTAGTCCTGGCTGAACAGGACTCGCCCAAGCCACCCAAGCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp CTTCTTTGTAGTGTCTTATTTACCCTATCAGGCTGGGAAGTCCCTGAAGGGAGACTCCAGGACACTCCCTaGCAGCCCCGGAGTGGACCA +
Preference number: 4 (lower is better)
Translates to: LLCSVLFTLSGWEVPEGRLQDTP*QPRSGP
Trigger: TGGTCCACTCCGGGGCTGGCAGGGAGTGTCCTGGAG...TCTCCCTTCAGGGACTTCCCAGCCTGATAGGGTAAATAAGACACTACAAAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp TGTTTCCATGAACTCATCATTGACTGCACCCATGGGACCACTTCCTCCTCATCCATCGTGCCACTGCACTaGACTCCAGCCTGGCGAGAG +
Preference number: 4 (lower is better)
Translates to: CFHELIIDCTHGTTSSSSIVPLH*TPAWRE
Trigger: CTCTCGCCAGGCTGGAGTGCAGTGCAGTGGCACGAT...GGATGAGGAGGAAGTGGTCCCATGGGTGCAGTCAATGATGAGTTCATGGAAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp AAGCCATATGCACATCTGCCCCACTTCCCTAAAGCACTGAGTCTGTTTTGGGCACTGAGATCGTGCCACTaGACTGCACTCCAGCCTGGC +
Preference number: 4 (lower is better)
Translates to: KPYAHLPHFPKALSLFWALRSCH*TALQPG
Trigger: GCCAGGCTGGAGTGCAGTGCAGTGGCACGATCTCAG...TGCCCAAAACAGACTCAGTGCTTTAGGGAAGTGGGGCAGATGTGCATATGGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp AGTAAGCTCACTTTAACTCAGATTCCTGGACGTGCTCGGGGCCCAGGCCCTCTGCCCAATATGGGCCTGTaGTGGCTGGGCGATATAAAT +
Preference number: 4 (lower is better)
Translates to: SKLTLTQIPGRARGPGPLPNMGL*WLGDIN
Trigger: ATTTATATCGCCCAGCCAGCACAGGCCCATATTGGG...CAGAGGGCCTGGGCCCCGAGCACGTCCAGGAATCTGAGTTAAAGTGAGCTTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405109.5
CDS-3UTR CCA 90 bp GCCAGGTACTGTGAGTGCACTTGGGGCACAAGTGCGAAGAGAAAGGCGGGACCCTTGGAGATAACCTCATaGCGATCTGCTCCATGGAAT +
Preference number: 4 (lower is better)
Translates to: ARYCECTWGTSAKRKAGPLEITS*RSAPWN
Trigger: ATTCCATGGAGCAGATCGCCATGAGGTTATCTCCAA...GGGTCCCGCCTTTCTCTTCGCACTTGTGCCCCAAGTGCACTCACAGTACCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp AGTAAGCTCACTTTAACTCAGATTCCTGGACGTGCTCGGGGCCCAGGCCCTCTGAAAAGGTCTGCTCCTTaGCAGTGCTGTTCATGGGTC +
Preference number: 4 (lower is better)
Translates to: SKLTLTQIPGRARGPGPLKRSAP*QCCSWV
Trigger: GACCCATGAACAGCACTGCCAAGGAGCAGACCTTTT...CAGAGGGCCTGGGCCCCGAGCACGTCCAGGAATCTGAGTTAAAGTGAGCTTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp AAGATCAGACATCTGAAATCTGTGAAGCACCGGTTTCGACCTCGGGGATTCCTCCTGGCTTGGGTGGCTTaGGCGAGTCCTGTTCAGCCA +
Preference number: 4 (lower is better)
Translates to: KIRHLKSVKHRFRPRGFLLAWVA*ASPVQP
Trigger: TGGCTGAACAGGACTCGCCCAAGCCACCCAAGCCAG...GAGGAATCCCCGAGGTCGAAACCGGTGCTTCACAGATTTCAGATGTCTGATCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp CATCTGAAATCTGTGAAGCACCGGTTTCGACCTCGGGGATTCCTCAGAAGAAGTTGTCCCTGGCTTGGGTaGCTTGGGCGAGTCCTGTTC +
Preference number: 4 (lower is better)
Translates to: HLKSVKHRFRPRGFLRRSCPWLG*LGRVLF
Trigger: GAACAGGACTCGCCCAAGCCACCCAAGCCAGGGACA...ACTTCTTCTGAGGAATCCCCGAGGTCGAAACCGGTGCTTCACAGATTTCAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp TGTTTCCATGAACTCATCATTGACTGCACCCATGGGACCACTTCCTCCTCATCCTGTCCCTGGCTTGGGTaGCTTGGGCGAGTCCTGTTC +
Preference number: 4 (lower is better)
Translates to: CFHELIIDCTHGTTSSSSCPWLG*LGRVLF
Trigger: GAACAGGACTCGCCCAAGCCACCCAAGCCAGGGACA...GGATGAGGAGGAAGTGGTCCCATGGGTGCAGTCAATGATGAGTTCATGGAAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp ATGAACTCATCATTGACTGCACCCATGGGACCACTTCCTCCTCATCCTTTTGGGAGCCTTCTCTGTCCCTaGCTTGGGTGGCTTGGGCGA +
Preference number: 4 (lower is better)
Translates to: MNSSLTAPMGPLPPHPFGSLLCP*LGWLGR
Trigger: TCGCCCAAGCCACCCAAGCCAGGGACAGAGAAGGCT...CCCAAAAGGATGAGGAGGAAGTGGTCCCATGGGTGCAGTCAATGATGAGTTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp CCTGGCTTGGGTGGCTTGGGCGAGTCCTGTTCAGCCAGGACTACCCTGCAGATGATCATGATCATCCACTaGGGAAAGAGTAAGCTCACT +
Preference number: 4 (lower is better)
Translates to: PGLGGLGESCSARTTLQMIMIIH*GKSKLT
Trigger: AGTGAGCTTACTCTTTCCCCAGTGGATGATCATGAT...CATCTGCAGGGTAGTCCTGGCTGAACAGGACTCGCCCAAGCCACCCAAGCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp GGAAAGAGTAAGCTCACTTTAACTCAGATTCCTGGACGTGCTCGGGGCCCAGGCAGCAGGTGGAGCAGGTaGAGTGACTATGTGAAGAGG +
Preference number: 4 (lower is better)
Translates to: GKSKLTLTQIPGRARGPGSRWSR*SDYVKR
Trigger: CCTCTTCACATAGTCACTCCACCTGCTCCACCTGCT...GCCTGGGCCCCGAGCACGTCCAGGAATCTGAGTTAAAGTGAGCTTACTCTTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp TTGGTGGCAGAAATAGGTTTCCAACAGGCTCCAGTTTTGGCAAGACCTGCCTGTAGGCGGAGGTTGCAGTaGGCTGAGATCGTGCCACTG +
Preference number: 4 (lower is better)
Translates to: LVAEIGFQQAPVLARPACRRRLQ*AEIVPL
Trigger: CAGTGGCACGATCTCAGCCCACTGCAACCTCCGCCT...ACAGGCAGGTCTTGCCAAAACTGGAGCCTGTTGGAAACCTATTTCTGCCACCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp TGTTTCCATGAACTCATCATTGACTGCACCCATGGGACCACTTCCTCCTCATCCCTCTCAGCCGCCAACTaGAGGAGCCAAGCAACAGGG +
Preference number: 4 (lower is better)
Translates to: CFHELIIDCTHGTTSSSSLSAAN*RSQATG
Trigger: CCCTGTTGCTTGGCTCCTCCAGTTGGCGGCTGAGAG...GGATGAGGAGGAAGTGGTCCCATGGGTGCAGTCAATGATGAGTTCATGGAAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp AGTAAGCTCACTTTAACTCAGATTCCTGGACGTGCTCGGGGCCCAGGCCCTCTGGCCAGGACCAGTCTGTaGCAAGGAAATTTCTCTCCT +
Preference number: 4 (lower is better)
Translates to: SKLTLTQIPGRARGPGPLARTSL*QGNFSP
Trigger: AGGAGAGAAATTTCCTTGCCACAGACTGGTCCTGGC...CAGAGGGCCTGGGCCCCGAGCACGTCCAGGAATCTGAGTTAAAGTGAGCTTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405109.5
ENST00000405256.5
CDS-3UTR CCA 90 bp TTGTCTCCCTCTGAATTTACTGACCACTCCTGCTTCCAAAAGAGCCTTGTGCAAGGCCACGACCTGGCTTaGACGCTACCGTGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: LSPSEFTDHSCFQKSLVQGHDLA*TLPCGR
Trigger: CCTGCCACACGGTAGCGTCCAAGCCAGGTCGTGGCC...TTGCACAAGGCTCTTTTGGAAGCAGGAGTGGTCAGTAAATTCAGAGGGAGACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405109.5
ENST00000407609.7
CDS-3UTR CCA 90 bp CTTCTTTGTAGTGTCTTATTTACCCTATCAGGCTGGGAAGTCCCTGAAGGGAGATACGAAGGTGCTGCCTaGTTCGGGGCGCGTCCCCAC +
Preference number: 4 (lower is better)
Translates to: LLCSVLFTLSGWEVPEGRYEGAA*FGARPH
Trigger: GTGGGGACGCGCCCCGAACCAGGCAGCACCTTCGTA...TCTCCCTTCAGGGACTTCCCAGCCTGATAGGGTAAATAAGACACTACAAAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407609.7
3UTR CAA 72 bp CTCGCATTAGACAGGAATGATGTTTACCCACTTATCTaGCCTCCCACAGGCGGGCGATGGTCTCACCTAGCG +
Preference number: 4 (lower is better)
Translates to: LALDRNDVYPLI*PPTGGRWSHLA
Trigger: CGCTAGGTGAGACCATCGCCCGCCTGTGGGAGGCAAGATAAGTGGGTAAACATCATTCCTGTCTAATGCGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR CAA 72 bp GCTCATTATGAAGTCAGGGAGAACAATGCCACCGTGTaGAACACACTGGGGCAGGCTGTGGTTGACAGCTGC +
Preference number: 4 (lower is better)
Translates to: AHYEVRENNATV*NTLGQAVVDSC
Trigger: GCAGCTGTCAACCACAGCCTGCCCCAGTGTGTTCAACACGGTGGCATTGTTCTCCCTGACTTCATAATGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR TCA 90 bp TGTTTCCATGAACTCATCATTGACTGCACCCATGGGACCACTTCCTCCTCATCCGGAATTGGTGCGGAGTaGGAGGAGGGGACTTGGCAT +
Preference number: 4 (lower is better)
Translates to: CFHELIIDCTHGTTSSSSGIGAE*EEGTWH
Trigger: ATGCCAAGTCCCCTCCTCTCACTCCGCACCAATTCC...GGATGAGGAGGAAGTGGTCCCATGGGTGCAGTCAATGATGAGTTCATGGAAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR TCA 90 bp TGTTTCCATGAACTCATCATTGACTGCACCCATGGGACCACTTCCTCCTCATCCGGGCCCTCTCCGTTCTaGAGGCCTTGTTTGCAGAAC +
Preference number: 4 (lower is better)
Translates to: CFHELIIDCTHGTTSSSSGPSPF*RPCLQN
Trigger: GTTCTGCAAACAAGGCCTTCAGAACGGAGAGGGCCC...GGATGAGGAGGAAGTGGTCCCATGGGTGCAGTCAATGATGAGTTCATGGAAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR TCA 90 bp AAGCCATATGCACATCTGCCCCACTTCCCTAAAGCACTGAGTCTGTTTTGGGCAGGGCCCTCTCCGTTCTaGAGGCCTTGTTTGCAGAAC +
Preference number: 4 (lower is better)
Translates to: KPYAHLPHFPKALSLFWAGPSPF*RPCLQN
Trigger: GTTCTGCAAACAAGGCCTTCAGAACGGAGAGGGCCC...TGCCCAAAACAGACTCAGTGCTTTAGGGAAGTGGGGCAGATGTGCATATGGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR TCA 90 bp ATGACATGCCAACAAGGCCTCCTTGAGCCAGGGAGACGCGGCAGCTTTCTGGACGAGCCTTGTGCAATGTaGAACTCTTTGGAGAAGTTG +
Preference number: 4 (lower is better)
Translates to: MTCQQGLLEPGRRGSFLDEPCAM*NSLEKL
Trigger: CAACTTCTCCAAAGAGTTTCACATTGCACAAGGCTC...GTCCAGAAAGCTGCCGCGTCTCCCTGGCTCAAGGAGGCCTTGTTGGCATGTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR TCA 90 bp TTTGGGAGTGACTGTCTTCTGATTATGCTCAATTGTGGGCTGAAGTGGGTGGCTCCCAGGCCCTCTGATTaGGAAACACTGCCCCATGCC +
Preference number: 4 (lower is better)
Translates to: FGSDCLLIMLNCGLKWVAPRPSD*ETLPHA
Trigger: GGCATGGGGCAGTGTTTCTCAATCAGAGGGCCTGGG...AGCCACCCACTTCAGCCCACAATTGAGCATAATCAGAAGACAGTCACTCCCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR TCA 90 bp TTGTCTCCCTCTGAATTTACTGACCACTCCTGCTTCCAAAAGAGCCTTGTGCAAGGGGCCCAGGCCCTCTaGTTGAGAAACACTGCCCCA +
Preference number: 4 (lower is better)
Translates to: LSPSEFTDHSCFQKSLVQGAQAL*LRNTAP
Trigger: TGGGGCAGTGTTTCTCAATCAGAGGGCCTGGGCCCC...TTGCACAAGGCTCTTTTGGAAGCAGGAGTGGTCAGTAAATTCAGAGGGAGACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR TCA 90 bp GGAAAGAGTAAGCTCACTTTAACTCAGATTCCTGGACGTGCTCGGGGCCCAGGCGGTGGAGTGACTATGTaGAGAGGAATGGAGGGAAGT +
Preference number: 4 (lower is better)
Translates to: GKSKLTLTQIPGRARGPGGGVTM*RGMEGS
Trigger: ACTTCCCTCCATTCCTCTTCACATAGTCACTCCACC...GCCTGGGCCCCGAGCACGTCCAGGAATCTGAGTTAAAGTGAGCTTACTCTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR TCA 90 bp ATGACATGCCAACAAGGCCTCCTTGAGCCAGGGAGACGCGGCAGCTTTCTGGACTCCTCAGAAGAAGTTTaGGAAATCCTGCCCTTGATG +
Preference number: 4 (lower is better)
Translates to: MTCQQGLLEPGRRGSFLDSSEEV*EILPLM
Trigger: CATCAAGGGCAGGATTTCTCAAACTTCTTCTGAGGA...GTCCAGAAAGCTGCCGCGTCTCCCTGGCTCAAGGAGGCCTTGTTGGCATGTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR TCA 90 bp CATCTGAAATCTGTGAAGCACCGGTTTCGACCTCGGGGATTCCTCAGAAGAAGTACAATGCCACCGTGTTaGACACACTGGGGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: HLKSVKHRFRPRGFLRRSTMPPC*THWGRL
Trigger: CAGCCTGCCCCAGTGTGTTCAACACGGTGGCATTGT...ACTTCTTCTGAGGAATCCCCGAGGTCGAAACCGGTGCTTCACAGATTTCAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR TCA 90 bp AAGCCATATGCACATCTGCCCCACTTCCCTAAAGCACTGAGTCTGTTTTGGGCAACAATGCCACCGTGTTaGACACACTGGGGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: KPYAHLPHFPKALSLFWATMPPC*THWGRL
Trigger: CAGCCTGCCCCAGTGTGTTCAACACGGTGGCATTGT...TGCCCAAAACAGACTCAGTGCTTTAGGGAAGTGGGGCAGATGTGCATATGGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR TCA 90 bp CTCCTGGTCACTGCCCTCCTGGCTCCAGCAGAGGTCATGCCCCTTCTCGGTCCTCGCAATTCTTTGTTATaGTTTACCCATCTCAGAACT +
Preference number: 4 (lower is better)
Translates to: LLVTALLAPAEVMPLLGPRNSLL*FTHLRT
Trigger: AGTTCTGAGATGGGTAAATCATAACAAAGAATTGCG...AGGACCGAGAAGGGGCATGACCTCTGCTGGAGCCAGGAGGGCAGTGACCAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405109.5
ENST00000405256.5
CDS-3UTR TCA 90 bp GAGGCCGTCCTCAACCCTGGCCGCCGACAGCCAACACAGCAGCTAGGAGGAACATTACAAGTTCCAATCTaGCTTGCTTCAAAAGCTCAA +
Preference number: 4 (lower is better)
Translates to: EAVLNPGRRQPTQQLGGTLQVPI*LASKAQ
Trigger: TTGAGCTTTTGAAGCAAGTCAGATTGGAACTTGTAA...TGTTCCTCCTAGCTGCTGTGTTGGCTGTCGGCGGCCAGGGTTGAGGACGGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405109.5
ENST00000405256.5
CDS-3UTR TCA 90 bp AGTAAGCTCACTTTAACTCAGATTCCTGGACGTGCTCGGGGCCCAGGCCCTCTGACTGTCACTACAGCATaGCATGCCAATTGCAGTGGA +
Preference number: 4 (lower is better)
Translates to: SKLTLTQIPGRARGPGPLTVTTA*HANCSG
Trigger: TCCACTGCAATTGGCATGTCATGCTGTAGTGACAGT...CAGAGGGCCTGGGCCCCGAGCACGTCCAGGAATCTGAGTTAAAGTGAGCTTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp GAGGCCGTCCTCAACCCTGGCCGCCGACAGCCAACACAGCAGCTAGGAGGAACAACTGCAACAGTTTGTTaGTTAATCGATCAGGTTCTT +
Preference number: 4 (lower is better)
Translates to: EAVLNPGRRQPTQQLGGTTATVC*LIDQVL
Trigger: AAGAACCTGATCGATTAAGCAACAAACTGTTGCAGT...TGTTCCTCCTAGCTGCTGTGTTGGCTGTCGGCGGCCAGGGTTGAGGACGGCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp GCCAGGTACTGTGAGTGCACTTGGGGCACAAGTGCGAAGAGAAAGGCGGGACCCGACCTACACAGCCAATaGCACCCAAAACATAAATCT +
Preference number: 4 (lower is better)
Translates to: ARYCECTWGTSAKRKAGPDLHSQ*HPKHKS
Trigger: AGATTTATGTTTTGGGTGGCATTGGCTGTGTAGGTC...GGGTCCCGCCTTTCTCTTCGCACTTGTGCCCCAAGTGCACTCACAGTACCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp ATGAACTCATCATTGACTGCACCCATGGGACCACTTCCTCCTCATCCTTTTGGGATGCTCCCCACCCAGTaGCCAGCACACACTGCTTCT +
Preference number: 4 (lower is better)
Translates to: MNSSLTAPMGPLPPHPFGMLPTQ*PAHTAS
Trigger: AGAAGCAGTGTGTGCTGGGCACTGGGTGGGGAGCAT...CCCAAAAGGATGAGGAGGAAGTGGTCCCATGGGTGCAGTCAATGATGAGTTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp TTTGGGAGTGACTGTCTTCTGATTATGCTCAATTGTGGGCTGAAGTGGGTGGCTCGGAGTGGACCAGGCTaGAGAACCCCACATCCCTGT +
Preference number: 4 (lower is better)
Translates to: FGSDCLLIMLNCGLKWVARSGPG*RTPHPC
Trigger: ACAGGGATGTGGGGTTCTGCAGCCTGGTCCACTCCG...AGCCACCCACTTCAGCCCACAATTGAGCATAATCAGAAGACAGTCACTCCCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp GCTCAATTGTGGGCTGAAGTGGGTGGCTCCATCTTTATTGCAAAGGCCGGGCCACAGCCAGGACTACCCTaGAGATGGTTGTATGTGTCT +
Preference number: 4 (lower is better)
Translates to: AQLWAEVGGSIFIAKAGPQPGLP*RWLYVS
Trigger: AGACACATACAACCATCTGCAGGGTAGTCCTGGCTG...TGGCCCGGCCTTTGCAATAAAGATGGAGCCACCCACTTCAGCCCACAATTGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp CATCTGAAATCTGTGAAGCACCGGTTTCGACCTCGGGGATTCCTCAGAAGAAGTAGAAACACTGCCCCATaGCGGCCACCCAAGAGGTCA +
Preference number: 4 (lower is better)
Translates to: HLKSVKHRFRPRGFLRRSRNTAP*RPPKRS
Trigger: TGACCTCTTGGGTGGCCGGCATGGGGCAGTGTTTCT...ACTTCTTCTGAGGAATCCCCGAGGTCGAAACCGGTGCTTCACAGATTTCAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp TTGTCTCCCTCTGAATTTACTGACCACTCCTGCTTCCAAAAGAGCCTTGTGCAATCAGATTCCTGGACGTaGTCGGGGCCCAGGCCCTCT +
Preference number: 4 (lower is better)
Translates to: LSPSEFTDHSCFQKSLVQSDSWT*SGPRPS
Trigger: AGAGGGCCTGGGCCCCGAGCACGTCCAGGAATCTGA...TTGCACAAGGCTCTTTTGGAAGCAGGAGTGGTCAGTAAATTCAGAGGGAGACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp GCTCAATTGTGGGCTGAAGTGGGTGGCTCCATCTTTATTGCAAAGGCCGGGCCAAGATGTGCCATGACATaGCAACAAGGCCTCCTTGAG +
Preference number: 4 (lower is better)
Translates to: AQLWAEVGGSIFIAKAGPRCAMT*QQGLLE
Trigger: CTCAAGGAGGCCTTGTTGGCATGTCATGGCACATCT...TGGCCCGGCCTTTGCAATAAAGATGGAGCCACCCACTTCAGCCCACAATTGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp ATGACATGCCAACAAGGCCTCCTTGAGCCAGGGAGACGCGGCAGCTTTCTGGACAGATACCTAAACAGTTaGAGGCATCCATGTGGTCCA +
Preference number: 4 (lower is better)
Translates to: MTCQQGLLEPGRRGSFLDRYLNS*RHPCGP
Trigger: TGGACCACATGGATGCCTCCAACTGTTTAGGTATCT...GTCCAGAAAGCTGCCGCGTCTCCCTGGCTCAAGGAGGCCTTGTTGGCATGTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
CDS-3UTR CCA 90 bp ATGACATGCCAACAAGGCCTCCTTGAGCCAGGGAGACGCGGCAGCTTTCTGGACTTGGAGATAACCTCATaGCGATCTGCTCCATGGAAT +
Preference number: 4 (lower is better)
Translates to: MTCQQGLLEPGRRGSFLDLEITS*RSAPWN
Trigger: ATTCCATGGAGCAGATCGCCATGAGGTTATCTCCAA...GTCCAGAAAGCTGCCGCGTCTCCCTGGCTCAAGGAGGCCTTGTTGGCATGTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp GGAAAGAGTAAGCTCACTTTAACTCAGATTCCTGGACGTGCTCGGGGCCCAGGCCTCGGGGATTCATCCTaGCTACTAGGCAGACATCAT +
Preference number: 4 (lower is better)
Translates to: GKSKLTLTQIPGRARGPGLGDSS*LLGRHH
Trigger: ATGATGTCTGCCTAGTAGCCAGGATGAATCCCCGAG...GCCTGGGCCCCGAGCACGTCCAGGAATCTGAGTTAAAGTGAGCTTACTCTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp GCTCAATTGTGGGCTGAAGTGGGTGGCTCCATCTTTATTGCAAAGGCCGGGCCAAAAAGGTCTGCTCCTTaGCAGTGCTGTTCATGGGTC +
Preference number: 4 (lower is better)
Translates to: AQLWAEVGGSIFIAKAGPKRSAP*QCCSWV
Trigger: GACCCATGAACAGCACTGCCAAGGAGCAGACCTTTT...TGGCCCGGCCTTTGCAATAAAGATGGAGCCACCCACTTCAGCCCACAATTGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp AAGCCATATGCACATCTGCCCCACTTCCCTAAAGCACTGAGTCTGTTTTGGGCACCAGGGCAGGATTCTTaGCCACTGTGGTCTGGCTTG +
Preference number: 4 (lower is better)
Translates to: KPYAHLPHFPKALSLFWAPGQDS*PLWSGL
Trigger: CAAGCCAGACCACAGTGGCCAAGAATCCTGCCCTGG...TGCCCAAAACAGACTCAGTGCTTTAGGGAAGTGGGGCAGATGTGCATATGGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp TTTGGGAGTGACTGTCTTCTGATTATGCTCAATTGTGGGCTGAAGTGGGTGGCTCTGGCTTGGGTGGCTTaGGCGAGTCCTGTTCAGCCA +
Preference number: 4 (lower is better)
Translates to: FGSDCLLIMLNCGLKWVALAWVA*ASPVQP
Trigger: TGGCTGAACAGGACTCGCCCAAGCCACCCAAGCCAG...AGCCACCCACTTCAGCCCACAATTGAGCATAATCAGAAGACAGTCACTCCCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp TTTGGGAGTGACTGTCTTCTGATTATGCTCAATTGTGGGCTGAAGTGGGTGGCTCTACGCTGGGTCTCCTaGTCCCTCTCCTTGGTGGCA +
Preference number: 4 (lower is better)
Translates to: FGSDCLLIMLNCGLKWVALRWVS*SLSLVA
Trigger: TGCCACCAAGGAGAGGGACCAGGAGACCCAGCGTAG...AGCCACCCACTTCAGCCCACAATTGAGCATAATCAGAAGACAGTCACTCCCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp ATGAACTCATCATTGACTGCACCCATGGGACCACTTCCTCCTCATCCTTTTGGGCGAGTTGAGCCTACTTaGGGCCAACCTACGCTGGGT +
Preference number: 4 (lower is better)
Translates to: MNSSLTAPMGPLPPHPFGRVEPT*GQPTLG
Trigger: ACCCAGCGTAGGTTGGCCCCAAGTAGGCTCAACTCG...CCCAAAAGGATGAGGAGGAAGTGGTCCCATGGGTGCAGTCAATGATGAGTTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp GCTCAATTGTGGGCTGAAGTGGGTGGCTCCATCTTTATTGCAAAGGCCGGGCCATACTGTGAGTGCACTTaGGGCACAAGTGCGAAGAGA +
Preference number: 4 (lower is better)
Translates to: AQLWAEVGGSIFIAKAGPYCECT*GTSAKR
Trigger: TCTCTTCGCACTTGTGCCCCAAGTGCACTCACAGTA...TGGCCCGGCCTTTGCAATAAAGATGGAGCCACCCACTTCAGCCCACAATTGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp GGAAAGAGTAAGCTCACTTTAACTCAGATTCCTGGACGTGCTCGGGGCCCAGGCTACTGTGAGTGCACTTaGGGCACAAGTGCGAAGAGA +
Preference number: 4 (lower is better)
Translates to: GKSKLTLTQIPGRARGPGYCECT*GTSAKR
Trigger: TCTCTTCGCACTTGTGCCCCAAGTGCACTCACAGTA...GCCTGGGCCCCGAGCACGTCCAGGAATCTGAGTTAAAGTGAGCTTACTCTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp GCTCAATTGTGGGCTGAAGTGGGTGGCTCCATCTTTATTGCAAAGGCCGGGCCATTGGGCACCTTGCTTTaGGAAGTGCTGACTGCAATG +
Preference number: 4 (lower is better)
Translates to: AQLWAEVGGSIFIAKAGPLGTLL*EVLTAM
Trigger: CATTGCAGTCAGCACTTCCCAAAGCAAGGTGCCCAA...TGGCCCGGCCTTTGCAATAAAGATGGAGCCACCCACTTCAGCCCACAATTGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp GGAAAGAGTAAGCTCACTTTAACTCAGATTCCTGGACGTGCTCGGGGCCCAGGCTTGGGCACCTTGCTTTaGGAAGTGCTGACTGCAATG +
Preference number: 4 (lower is better)
Translates to: GKSKLTLTQIPGRARGPGLGTLL*EVLTAM
Trigger: CATTGCAGTCAGCACTTCCCAAAGCAAGGTGCCCAA...GCCTGGGCCCCGAGCACGTCCAGGAATCTGAGTTAAAGTGAGCTTACTCTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp CTGATTGAGAAACACTGCCCCATGCCGGCCACCCAAGAGGTCACCCACATGCCATTTAGAGAGTGCTGTTaGGGTGTCTTGATGGCTTTG +
Preference number: 4 (lower is better)
Translates to: LIEKHCPMPATQEVTHMPFRECC*GVLMAL
Trigger: CAAAGCCATCAAGACACCCCAACAGCACTCTCTAAA...TGGCATGTGGGTGACCTCTTGGGTGGCCGGCATGGGGCAGTGTTTCTCAATCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405109.5
ENST00000405256.5
CDS-3UTR CCA 90 bp GGGAGGGTCATGTTGTTTTTAATTGCAAATACAGAAGTCAGACAAGAAGCACCATTGGACGCTACCGTGTaGCAGGGCGGCCAGCGGGCC +
Preference number: 4 (lower is better)
Translates to: GRVMLFLIANTEVRQEAPLDATV*QGGQRA
Trigger: GGCCCGCTGGCCGCCCTGCCACACGGTAGCGTCCAA...TGGTGCTTCTTGTCTGACTTCTGTATTTGCAATTAAAAACAACATGACCCTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405109.5
ENST00000407609.7
CDS-3UTR CCA 90 bp GTCATCACAATCACACAGCTCAGCACCAAAGAAAGCTGTCTCTACTTAGGGTTTGGCCACGACCTGGCTTaGACGCTACCGTGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: VITITQLSTKESCLYLGFGHDLA*TLPCGR
Trigger: CCTGCCACACGGTAGCGTCCAAGCCAGGTCGTGGCC...AAACCCTAAGTAGAGACAGCTTTCTTTGGTGCTGAGCTGTGTGATTGTGATGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405109.5
ENST00000407609.7
3UTR CAA 72 bp ACTGCAGACAGGCACGAGCTTTCTGTCTCTGGGCCCTaGCTTGGCTGTTTCCATGAACTCATCATTGACTGC +
Preference number: 4 (lower is better)
Translates to: TADRHELSVSGP*LGCFHELIIDC
Trigger: GCAGTCAATGATGAGTTCATGGAAACAGCCAAGCAAGGGCCCAGAGACAGAAAGCTCGTGCCTGTCTGCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR TCA 90 bp AAGATCAGACATCTGAAATCTGTGAAGCACCGGTTTCGACCTCGGGGATTCCTCACCTGGCCCTTGTCTTaGCCTACACAGCCAATGCCA +
Preference number: 4 (lower is better)
Translates to: KIRHLKSVKHRFRPRGFLTWPLS*PTQPMP
Trigger: TGGCATTGGCTGTGTAGGTCAAGACAAGGGCCAGGT...GAGGAATCCCCGAGGTCGAAACCGGTGCTTCACAGATTTCAGATGTCTGATCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR TCA 90 bp TTGTCTCCCTCTGAATTTACTGACCACTCCTGCTTCCAAAAGAGCCTTGTGCAAAGGCTGGGAAGTCCCTaGAGGGAGACTCCCCATGCT +
Preference number: 4 (lower is better)
Translates to: LSPSEFTDHSCFQKSLVQRLGSP*RETPHA
Trigger: AGCATGGGGAGTCTCCCTTCAGGGACTTCCCAGCCT...TTGCACAAGGCTCTTTTGGAAGCAGGAGTGGTCAGTAAATTCAGAGGGAGACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR TCA 90 bp TTGGTGGCAGAAATAGGTTTCCAACAGGCTCCAGTTTTGGCAAGACCTGCCTGTCACTGTGGTCTGGCTTaGGTGCCTTGGTTGTTAGGG +
Preference number: 4 (lower is better)
Translates to: LVAEIGFQQAPVLARPACHCGLA*VPWLLG
Trigger: CCCTAACAACCAAGGCACTCAAGCCAGACCACAGTG...ACAGGCAGGTCTTGCCAAAACTGGAGCCTGTTGGAAACCTATTTCTGCCACCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR TCA 90 bp ATGAACTCATCATTGACTGCACCCATGGGACCACTTCCTCCTCATCCTTTTGGGCACTGTGGTCTGGCTTaGGTGCCTTGGTTGTTAGGG +
Preference number: 4 (lower is better)
Translates to: MNSSLTAPMGPLPPHPFGHCGLA*VPWLLG
Trigger: CCCTAACAACCAAGGCACTCAAGCCAGACCACAGTG...CCCAAAAGGATGAGGAGGAAGTGGTCCCATGGGTGCAGTCAATGATGAGTTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR TCA 90 bp CATCTGAAATCTGTGAAGCACCGGTTTCGACCTCGGGGATTCCTCAGAAGAAGTCTAGGAGATGTGCCATaGCATGCCAACAAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: HLKSVKHRFRPRGFLRRSLGDVP*HANKAS
Trigger: GGAGGCCTTGTTGGCATGTCATGGCACATCTCCTAG...ACTTCTTCTGAGGAATCCCCGAGGTCGAAACCGGTGCTTCACAGATTTCAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR TCA 90 bp AGTAAGCTCACTTTAACTCAGATTCCTGGACGTGCTCGGGGCCCAGGCCCTCTGTCCTCAGAAGAAGTTTaGGAAATCCTGCCCTTGATG +
Preference number: 4 (lower is better)
Translates to: SKLTLTQIPGRARGPGPLSSEEV*EILPLM
Trigger: CATCAAGGGCAGGATTTCTCAAACTTCTTCTGAGGA...CAGAGGGCCTGGGCCCCGAGCACGTCCAGGAATCTGAGTTAAAGTGAGCTTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR TCA 90 bp CTGATTGAGAAACACTGCCCCATGCCGGCCACCCAAGAGGTCACCCACATGCCATCTCTCCTTCTGCTGTaGGTACCACATCAATCATTT +
Preference number: 4 (lower is better)
Translates to: LIEKHCPMPATQEVTHMPSLLLL*VPHQSF
Trigger: AAATGATTGATGTGGTACTCACAGCAGAAGGAGAGA...TGGCATGTGGGTGACCTCTTGGGTGGCCGGCATGGGGCAGTGTTTCTCAATCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405109.5
ENST00000405256.5
CDS-3UTR TCA 90 bp GCCAGGTACTGTGAGTGCACTTGGGGCACAAGTGCGAAGAGAAAGGCGGGACCCTCCTATGTCTTGATCTaGTTCCTGAAGAATTGTTGC +
Preference number: 4 (lower is better)
Translates to: ARYCECTWGTSAKRKAGPSYVLI*FLKNCC
Trigger: GCAACAATTCTTCAGGAATCAGATCAAGACATAGGA...GGGTCCCGCCTTTCTCTTCGCACTTGTGCCCCAAGTGCACTCACAGTACCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405109.5
ENST00000405256.5
CDS-3UTR GCA 90 bp AGTAAGCTCACTTTAACTCAGATTCCTGGACGTGCTCGGGGCCCAGGCCCTCTGCACCTTAGTGCTCATTaGCTTCTTCCACCAAATCTG +
Preference number: 4 (lower is better)
Translates to: SKLTLTQIPGRARGPGPLHLSAH*LLPPNL
Trigger: CAGATTTGGTGGAAGAAGGCAATGAGCACTAAGGTG...CAGAGGGCCTGGGCCCCGAGCACGTCCAGGAATCTGAGTTAAAGTGAGCTTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp ATGAACTCATCATTGACTGCACCCATGGGACCACTTCCTCCTCATCCTTTTGGGGTGCCCAGCACACACTaGTTCTTCACACACAGGCCA +
Preference number: 4 (lower is better)
Translates to: MNSSLTAPMGPLPPHPFGVPSTH*FFTHRP
Trigger: TGGCCTGTGTGTGAAGAAGCAGTGTGTGCTGGGCAC...CCCAAAAGGATGAGGAGGAAGTGGTCCCATGGGTGCAGTCAATGATGAGTTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp TTGGTGGCAGAAATAGGTTTCCAACAGGCTCCAGTTTTGGCAAGACCTGCCTGTGTGCCCAGCACACACTaGTTCTTCACACACAGGCCA +
Preference number: 4 (lower is better)
Translates to: LVAEIGFQQAPVLARPACVPSTH*FFTHRP
Trigger: TGGCCTGTGTGTGAAGAAGCAGTGTGTGCTGGGCAC...ACAGGCAGGTCTTGCCAAAACTGGAGCCTGTTGGAAACCTATTTCTGCCACCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp AAGATCAGACATCTGAAATCTGTGAAGCACCGGTTTCGACCTCGGGGATTCCTCGCTGCTGGGTGGCGTTaGTTCAGTAGAAGGGGATTC +
Preference number: 4 (lower is better)
Translates to: KIRHLKSVKHRFRPRGFLAAGWR*FSRRGF
Trigger: GAATCCCCTTCTACTGAAGCAACGCCACCCAGCAGC...GAGGAATCCCCGAGGTCGAAACCGGTGCTTCACAGATTTCAGATGTCTGATCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp CTTCTTTGTAGTGTCTTATTTACCCTATCAGGCTGGGAAGTCCCTGAAGGGAGACGGAGTGGACCAGGCTaGAGAACCCCACATCCCTGT +
Preference number: 4 (lower is better)
Translates to: LLCSVLFTLSGWEVPEGRRSGPG*RTPHPC
Trigger: ACAGGGATGTGGGGTTCTGCAGCCTGGTCCACTCCG...TCTCCCTTCAGGGACTTCCCAGCCTGATAGGGTAAATAAGACACTACAAAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp ATGAACTCATCATTGACTGCACCCATGGGACCACTTCCTCCTCATCCTTTTGGGAGCAGCTGGAGGAGATaGTTCTTCCCCTGTCCTCAG +
Preference number: 4 (lower is better)
Translates to: MNSSLTAPMGPLPPHPFGSSWRR*FFPCPQ
Trigger: CTGAGGACAGGGGAAGAAGCATCTCCTCCAGCTGCT...CCCAAAAGGATGAGGAGGAAGTGGTCCCATGGGTGCAGTCAATGATGAGTTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp TTGGTGGCAGAAATAGGTTTCCAACAGGCTCCAGTTTTGGCAAGACCTGCCTGTAGCAGCTGGAGGAGATaGTTCTTCCCCTGTCCTCAG +
Preference number: 4 (lower is better)
Translates to: LVAEIGFQQAPVLARPACSSWRR*FFPCPQ
Trigger: CTGAGGACAGGGGAAGAAGCATCTCCTCCAGCTGCT...ACAGGCAGGTCTTGCCAAAACTGGAGCCTGTTGGAAACCTATTTCTGCCACCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp GCCAGGTACTGTGAGTGCACTTGGGGCACAAGTGCGAAGAGAAAGGCGGGACCCTCCAAAAGAGCCTTGTaGAATGTGAAACTCTTTGGA +
Preference number: 4 (lower is better)
Translates to: ARYCECTWGTSAKRKAGPSKRAL*NVKLFG
Trigger: TCCAAAGAGTTTCACATTGCACAAGGCTCTTTTGGA...GGGTCCCGCCTTTCTCTTCGCACTTGTGCCCCAAGTGCACTCACAGTACCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp TGTTTCCATGAACTCATCATTGACTGCACCCATGGGACCACTTCCTCCTCATCCCTGATTGAGAAACACTaGCCCATGCCGGCCACCCAA +
Preference number: 4 (lower is better)
Translates to: CFHELIIDCTHGTTSSSSLIEKH*PMPATQ
Trigger: TTGGGTGGCCGGCATGGGGCAGTGTTTCTCAATCAG...GGATGAGGAGGAAGTGGTCCCATGGGTGCAGTCAATGATGAGTTCATGGAAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp CTTCTTTGTAGTGTCTTATTTACCCTATCAGGCTGGGAAGTCCCTGAAGGGAGACTCCAGCAGAGGTCATaGCCCTTCTCGGTCCTCCCT +
Preference number: 4 (lower is better)
Translates to: LLCSVLFTLSGWEVPEGRLQQRS*PFSVLP
Trigger: AGGGAGGACCGAGAAGGGGCATGACCTCTGCTGGAG...TCTCCCTTCAGGGACTTCCCAGCCTGATAGGGTAAATAAGACACTACAAAGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp AGTAAGCTCACTTTAACTCAGATTCCTGGACGTGCTCGGGGCCCAGGCCCTCTGTATAAGAGCCCATCATaGAGTACTGCAACAGCCTTC +
Preference number: 4 (lower is better)
Translates to: SKLTLTQIPGRARGPGPLYKSPS*STATAF
Trigger: GAAGGCTGTTGCAGTACTGCATGATGGGCTCTTATA...CAGAGGGCCTGGGCCCCGAGCACGTCCAGGAATCTGAGTTAAAGTGAGCTTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp CCTGGCTTGGGTGGCTTGGGCGAGTCCTGTTCAGCCAGGACTACCCTGCAGATGTATGTCAACACAATCTaGATCACACAGAAGCATTGT +
Preference number: 4 (lower is better)
Translates to: PGLGGLGESCSARTTLQMYVNTI*ITQKHC
Trigger: ACAATGCTTCTGTGTGATGCAGATTGTGTTGACATA...CATCTGCAGGGTAGTCCTGGCTGAACAGGACTCGCCCAAGCCACCCAAGCCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405109.5
ENST00000405256.5
CDS-3UTR GCA 90 bp ATGACATGCCAACAAGGCCTCCTTGAGCCAGGGAGACGCGGCAGCTTTCTGGACGGTCATTATGAATACTaGCCAGAGCATAGAGTTCTC +
Preference number: 4 (lower is better)
Translates to: MTCQQGLLEPGRRGSFLDGHYEY*PEHRVL
Trigger: GAGAACTCTATGCTCTGGGCAGTATTCATAATGACC...GTCCAGAAAGCTGCCGCGTCTCCCTGGCTCAAGGAGGCCTTGTTGGCATGTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp TTGTCTCCCTCTGAATTTACTGACCACTCCTGCTTCCAAAAGAGCCTTGTGCAAACAGGTGCTGCCCTCTaGTTGGAAGTGGCCCGAGAC +
Preference number: 4 (lower is better)
Translates to: LSPSEFTDHSCFQKSLVQTGAAL*LEVARD
Trigger: GTCTCGGGCCACTTCCAAGCAGAGGGCAGCACCTGT...TTGCACAAGGCTCTTTTGGAAGCAGGAGTGGTCAGTAAATTCAGAGGGAGACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405109.5
CDS-3UTR CCA 90 bp GCTCAATTGTGGGCTGAAGTGGGTGGCTCCATCTTTATTGCAAAGGCCGGGCCAGCTACAACATTCCACTaGTTTTCCCATGGGTCCAGT +
Preference number: 4 (lower is better)
Translates to: AQLWAEVGGSIFIAKAGPATTFH*FSHGSS
Trigger: ACTGGACCCATGGGAAAACCAGTGGAATGTTGTAGC...TGGCCCGGCCTTTGCAATAAAGATGGAGCCACCCACTTCAGCCCACAATTGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp ATGAACTCATCATTGACTGCACCCATGGGACCACTTCCTCCTCATCCTTTTGGGTGGCAGTGCTGTTCATaGGTCCCCAGCAGAGTGAGA +
Preference number: 4 (lower is better)
Translates to: MNSSLTAPMGPLPPHPFGWQCCS*VPSRVR
Trigger: TCTCACTCTGCTGGGGACCCATGAACAGCACTGCCA...CCCAAAAGGATGAGGAGGAAGTGGTCCCATGGGTGCAGTCAATGATGAGTTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp AGAAAGCTGTCTCTACTTAGGGTTTGTCTCCCTCTGAATTTACTGACCACTCCTTGGGCAAAGGCAGCCTaGGTCAGCCCACTCCAGGAC +
Preference number: 4 (lower is better)
Translates to: RKLSLLRVCLPLNLLTTPWAKAA*VSPLQD
Trigger: GTCCTGGAGTGGGCTGACCCAGGCTGCCTTTGCCCA...AGGAGTGGTCAGTAAATTCAGAGGGAGACAAACCCTAAGTAGAGACAGCTTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp AAGCCATATGCACATCTGCCCCACTTCCCTAAAGCACTGAGTCTGTTTTGGGCATATGTGTCTGAGAGGTaGGCAAAGGCAGCCTGGGTC +
Preference number: 4 (lower is better)
Translates to: KPYAHLPHFPKALSLFWAYVSER*AKAAWV
Trigger: GACCCAGGCTGCCTTTGCCCACCTCTCAGACACATA...TGCCCAAAACAGACTCAGTGCTTTAGGGAAGTGGGGCAGATGTGCATATGGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp CTTCTTTGTAGTGTCTTATTTACCCTATCAGGCTGGGAAGTCCCTGAAGGGAGATCTCTGTCCCTGGCTTaGGTGGCTTGGGCGAGTCCT +
Preference number: 4 (lower is better)
Translates to: LLCSVLFTLSGWEVPEGRSLSLA*VAWASP
Trigger: AGGACTCGCCCAAGCCACCCAAGCCAGGGACAGAGA...TCTCCCTTCAGGGACTTCCCAGCCTGATAGGGTAAATAAGACACTACAAAGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp CTTCTTTGTAGTGTCTTATTTACCCTATCAGGCTGGGAAGTCCCTGAAGGGAGACTACGCTGGGTCTCCTaGTCCCTCTCCTTGGTGGCA +
Preference number: 4 (lower is better)
Translates to: LLCSVLFTLSGWEVPEGRLRWVS*SLSLVA
Trigger: TGCCACCAAGGAGAGGGACCAGGAGACCCAGCGTAG...TCTCCCTTCAGGGACTTCCCAGCCTGATAGGGTAAATAAGACACTACAAAGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp GCTTCCAAAAGAGCCTTGTGCAATGTGAAACTCTTTGGAGAAGTTGCTGAAGAAGGGGCCAACCTACGCTaGGTCTCCTGGTCCCTCTCC +
Preference number: 4 (lower is better)
Translates to: ASKRALCNVKLFGEVAEEGANLR*VSWSLS
Trigger: GGAGAGGGACCAGGAGACCCAGCGTAGGTTGGCCCC...TTCTTCAGCAACTTCTCCAAAGAGTTTCACATTGCACAAGGCTCTTTTGGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp TTGGTGGCAGAAATAGGTTTCCAACAGGCTCCAGTTTTGGCAAGACCTGCCTGTTTTAACTCAGATTCCTaGACGTGCTCGGGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: LVAEIGFQQAPVLARPACFNSDS*TCSGPR
Trigger: CCTGGGCCCCGAGCACGTCCAGGAATCTGAGTTAAA...ACAGGCAGGTCTTGCCAAAACTGGAGCCTGTTGGAAACCTATTTCTGCCACCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp AAGCCATATGCACATCTGCCCCACTTCCCTAAAGCACTGAGTCTGTTTTGGGCATTTAACTCAGATTCCTaGACGTGCTCGGGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: KPYAHLPHFPKALSLFWAFNSDS*TCSGPR
Trigger: CCTGGGCCCCGAGCACGTCCAGGAATCTGAGTTAAA...TGCCCAAAACAGACTCAGTGCTTTAGGGAAGTGGGGCAGATGTGCATATGGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp CTTCTTTGTAGTGTCTTATTTACCCTATCAGGCTGGGAAGTCCCTGAAGGGAGAAGGCGGAGGTTGCAGTaGGCTGAGATCGTGCCACTG +
Preference number: 4 (lower is better)
Translates to: LLCSVLFTLSGWEVPEGRRRRLQ*AEIVPL
Trigger: CAGTGGCACGATCTCAGCCCACTGCAACCTCCGCCT...TCTCCCTTCAGGGACTTCCCAGCCTGATAGGGTAAATAAGACACTACAAAGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp TGTTTCCATGAACTCATCATTGACTGCACCCATGGGACCACTTCCTCCTCATCCTCTGGAAAGTTCCACTaGGACACTGCCCAGACCTCG +
Preference number: 4 (lower is better)
Translates to: CFHELIIDCTHGTTSSSSSGKFH*DTAQTS
Trigger: CGAGGTCTGGGCAGTGTCCCAGTGGAACTTTCCAGA...GGATGAGGAGGAAGTGGTCCCATGGGTGCAGTCAATGATGAGTTCATGGAAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp GCTCAATTGTGGGCTGAAGTGGGTGGCTCCATCTTTATTGCAAAGGCCGGGCCAACATGCCAATTGCAGTaGAAGGGGAGACACCCTTTT +
Preference number: 4 (lower is better)
Translates to: AQLWAEVGGSIFIAKAGPTCQLQ*KGRHPF
Trigger: AAAAGGGTGTCTCCCCTTCCACTGCAATTGGCATGT...TGGCCCGGCCTTTGCAATAAAGATGGAGCCACCCACTTCAGCCCACAATTGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp GGGAGGGTCATGTTGTTTTTAATTGCAAATACAGAAGTCAGACAAGAAGCACCACCCTCTGCTTGGAAGTaGCCCGAGACCACGCCGCCG +
Preference number: 4 (lower is better)
Translates to: GRVMLFLIANTEVRQEAPPSAWK*PETTPP
Trigger: CGGCGGCGTGGTCTCGGGCCACTTCCAAGCAGAGGG...TGGTGCTTCTTGTCTGACTTCTGTATTTGCAATTAAAAACAACATGACCCTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000405109.5
CDS-3UTR TCA 90 bp TGTTTCCATGAACTCATCATTGACTGCACCCATGGGACCACTTCCTCCTCATCCTGCTCAATTGTGGGCTaGAGTGGGTGGCTCCATCTT +
Preference number: 4 (lower is better)
Translates to: CFHELIIDCTHGTTSSSSCSIVG*SGWLHL
Trigger: AAGATGGAGCCACCCACTTCAGCCCACAATTGAGCA...GGATGAGGAGGAAGTGGTCCCATGGGTGCAGTCAATGATGAGTTCATGGAAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR TCA 90 bp TTGGTGGCAGAAATAGGTTTCCAACAGGCTCCAGTTTTGGCAAGACCTGCCTGTTGCTCAATTGTGGGCTaGAGTGGGTGGCTCCATCTT +
Preference number: 4 (lower is better)
Translates to: LVAEIGFQQAPVLARPACCSIVG*SGWLHL
Trigger: AAGATGGAGCCACCCACTTCAGCCCACAATTGAGCA...ACAGGCAGGTCTTGCCAAAACTGGAGCCTGTTGGAAACCTATTTCTGCCACCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR TCA 90 bp GGAAAGAGTAAGCTCACTTTAACTCAGATTCCTGGACGTGCTCGGGGCCCAGGCGAGCCTTGTGCAATGTaGAACTCTTTGGAGAAGTTG +
Preference number: 4 (lower is better)
Translates to: GKSKLTLTQIPGRARGPGEPCAM*NSLEKL
Trigger: CAACTTCTCCAAAGAGTTTCACATTGCACAAGGCTC...GCCTGGGCCCCGAGCACGTCCAGGAATCTGAGTTAAAGTGAGCTTACTCTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR TCA 90 bp GGGAGGGTCATGTTGTTTTTAATTGCAAATACAGAAGTCAGACAAGAAGCACCACCCACCCTCCCGAGTTaGGCCTACTTGGGGCCAACC +
Preference number: 4 (lower is better)
Translates to: GRVMLFLIANTEVRQEAPPTLPS*AYLGPT
Trigger: GGTTGGCCCCAAGTAGGCTCAACTCGGGAGGGTGGG...TGGTGCTTCTTGTCTGACTTCTGTATTTGCAATTAAAAACAACATGACCCTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR TCA 90 bp AGAAAGCTGTCTCTACTTAGGGTTTGTCTCCCTCTGAATTTACTGACCACTCCTCCCAGGCCCTCTGATTaGGAAACACTGCCCCATGCC +
Preference number: 4 (lower is better)
Translates to: RKLSLLRVCLPLNLLTTPPRPSD*ETLPHA
Trigger: GGCATGGGGCAGTGTTTCTCAATCAGAGGGCCTGGG...AGGAGTGGTCAGTAAATTCAGAGGGAGACAAACCCTAAGTAGAGACAGCTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR TCA 90 bp GCTCAATTGTGGGCTGAAGTGGGTGGCTCCATCTTTATTGCAAAGGCCGGGCCAAGAATGCACAGATCATaGTCATCCACTGGGGAAAGA +
Preference number: 4 (lower is better)
Translates to: AQLWAEVGGSIFIAKAGPRMHRS*SSTGER
Trigger: TCTTTCCCCAGTGGATGATCATGATCTGTGCATTCT...TGGCCCGGCCTTTGCAATAAAGATGGAGCCACCCACTTCAGCCCACAATTGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR TCA 90 bp GTCATCACAATCACACAGCTCAGCACCAAAGAAAGCTGTCTCTACTTAGGGTTTCCTGAATGTGTCCATTaGGGGCATCGGGGGCCTCAG +
Preference number: 4 (lower is better)
Translates to: VITITQLSTKESCLYLGFPECVH*GHRGPQ
Trigger: CTGAGGCCCCCGATGCCCTCAATGGACACATTCAGG...AAACCCTAAGTAGAGACAGCTTTCTTTGGTGCTGAGCTGTGTGATTGTGATGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR TCA 90 bp AGAAAGCTGTCTCTACTTAGGGTTTGTCTCCCTCTGAATTTACTGACCACTCCTTGGTCTCACCTAGCGTaGCCCTCAGGTGCCTCTGCT +
Preference number: 4 (lower is better)
Translates to: RKLSLLRVCLPLNLLTTPWSHLA*PSGASA
Trigger: AGCAGAGGCACCTGAGGGTCACGCTAGGTGAGACCA...AGGAGTGGTCAGTAAATTCAGAGGGAGACAAACCCTAAGTAGAGACAGCTTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR TCA 90 bp CTGATTGAGAAACACTGCCCCATGCCGGCCACCCAAGAGGTCACCCACATGCCAACTTGGGAGATGAGATaGAATAGGTTTTCCGTGATA +
Preference number: 4 (lower is better)
Translates to: LIEKHCPMPATQEVTHMPTWEMR*NRFSVI
Trigger: TATCACGGAAAACCTATTTCATCTCATCTCCCAAGT...TGGCATGTGGGTGACCTCTTGGGTGGCCGGCATGGGGCAGTGTTTCTCAATCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405109.5
ENST00000405256.5
CDS-3UTR TCA 90 bp ATGACATGCCAACAAGGCCTCCTTGAGCCAGGGAGACGCGGCAGCTTTCTGGACACTTGGGAGATGAGATaGAATAGGTTTTCCGTGATA +
Preference number: 4 (lower is better)
Translates to: MTCQQGLLEPGRRGSFLDTWEMR*NRFSVI
Trigger: TATCACGGAAAACCTATTTCATCTCATCTCCCAAGT...GTCCAGAAAGCTGCCGCGTCTCCCTGGCTCAAGGAGGCCTTGTTGGCATGTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405109.5
ENST00000405256.5
CDS-3UTR GCA 90 bp ATGAACTCATCATTGACTGCACCCATGGGACCACTTCCTCCTCATCCTTTTGGGACAGGCCACTACGCATaGAGTGCACATGACTGGCAT +
Preference number: 4 (lower is better)
Translates to: MNSSLTAPMGPLPPHPFGTGHYA*SAHDWH
Trigger: ATGCCAGTCATGTGCACTGCATGCGTAGTGGCCTGT...CCCAAAAGGATGAGGAGGAAGTGGTCCCATGGGTGCAGTCAATGATGAGTTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp TTTGGGAGTGACTGTCTTCTGATTATGCTCAATTGTGGGCTGAAGTGGGTGGCTGTGCCCAGCACACACTaGTTCTTCACACACAGGCCA +
Preference number: 4 (lower is better)
Translates to: FGSDCLLIMLNCGLKWVAVPSTH*FFTHRP
Trigger: TGGCCTGTGTGTGAAGAAGCAGTGTGTGCTGGGCAC...AGCCACCCACTTCAGCCCACAATTGAGCATAATCAGAAGACAGTCACTCCCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp TTGTCTCCCTCTGAATTTACTGACCACTCCTGCTTCCAAAAGAGCCTTGTGCAATCTGCTCCTTGGCAGTaGTGTTCATGGGTCCCCAGC +
Preference number: 4 (lower is better)
Translates to: LSPSEFTDHSCFQKSLVQSAPWQ*CSWVPS
Trigger: GCTGGGGACCCATGAACAGCACTGCCAAGGAGCAGA...TTGCACAAGGCTCTTTTGGAAGCAGGAGTGGTCAGTAAATTCAGAGGGAGACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp ATGAACTCATCATTGACTGCACCCATGGGACCACTTCCTCCTCATCCTTTTGGGCTGTCTCTGGGCCCTTaGTTGGCTGTTTCCATGAAC +
Preference number: 4 (lower is better)
Translates to: MNSSLTAPMGPLPPHPFGLSLGP*LAVSMN
Trigger: GTTCATGGAAACAGCCAAGCAAGGGCCCAGAGACAG...CCCAAAAGGATGAGGAGGAAGTGGTCCCATGGGTGCAGTCAATGATGAGTTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp CTTCTTTGTAGTGTCTTATTTACCCTATCAGGCTGGGAAGTCCCTGAAGGGAGAAGTTTTGGCAAGACCTaGCTGTCCTGCCTGGTGGGC +
Preference number: 4 (lower is better)
Translates to: LLCSVLFTLSGWEVPEGRSFGKT*LSCLVG
Trigger: GCCCACCAGGCAGGACAGGCAGGTCTTGCCAAAACT...TCTCCCTTCAGGGACTTCCCAGCCTGATAGGGTAAATAAGACACTACAAAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp TTGTCTCCCTCTGAATTTACTGACCACTCCTGCTTCCAAAAGAGCCTTGTGCAAGCCAGGTACTGTGAGTaGACTTGGGGCACAAGTGCG +
Preference number: 4 (lower is better)
Translates to: LSPSEFTDHSCFQKSLVQARYCE*TWGTSA
Trigger: CGCACTTGTGCCCCAAGTGCACTCACAGTACCTGGC...TTGCACAAGGCTCTTTTGGAAGCAGGAGTGGTCAGTAAATTCAGAGGGAGACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp TTGTCTCCCTCTGAATTTACTGACCACTCCTGCTTCCAAAAGAGCCTTGTGCAAAGAAACACTGCCCCATaGCGGCCACCCAAGAGGTCA +
Preference number: 4 (lower is better)
Translates to: LSPSEFTDHSCFQKSLVQRNTAP*RPPKRS
Trigger: TGACCTCTTGGGTGGCCGGCATGGGGCAGTGTTTCT...TTGCACAAGGCTCTTTTGGAAGCAGGAGTGGTCAGTAAATTCAGAGGGAGACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp TTTGGGAGTGACTGTCTTCTGATTATGCTCAATTGTGGGCTGAAGTGGGTGGCTCTGATTGAGAAACACTaGCCCATGCCGGCCACCCAA +
Preference number: 4 (lower is better)
Translates to: FGSDCLLIMLNCGLKWVALIEKH*PMPATQ
Trigger: TTGGGTGGCCGGCATGGGGCAGTGTTTCTCAATCAG...AGCCACCCACTTCAGCCCACAATTGAGCATAATCAGAAGACAGTCACTCCCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp TTTGGGAGTGACTGTCTTCTGATTATGCTCAATTGTGGGCTGAAGTGGGTGGCTCCGTCACAAGCCATATaGACATCTGCCCCACTTCCC +
Preference number: 4 (lower is better)
Translates to: FGSDCLLIMLNCGLKWVAPSQAI*TSAPLP
Trigger: GGGAAGTGGGGCAGATGTGCATATGGCTTGTGACGG...AGCCACCCACTTCAGCCCACAATTGAGCATAATCAGAAGACAGTCACTCCCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp AAGCCATATGCACATCTGCCCCACTTCCCTAAAGCACTGAGTCTGTTTTGGGCATTTACCCACTTATCTTaGCTCCCACAGGCGGGCGAT +
Preference number: 4 (lower is better)
Translates to: KPYAHLPHFPKALSLFWAFTHLS*LPQAGD
Trigger: ATCGCCCGCCTGTGGGAGGCAAGATAAGTGGGTAAA...TGCCCAAAACAGACTCAGTGCTTTAGGGAAGTGGGGCAGATGTGCATATGGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp ATGAACTCATCATTGACTGCACCCATGGGACCACTTCCTCCTCATCCTTTTGGGCTAACGATATCTGGCTaGAGGTGGGGAGGGTCATGT +
Preference number: 4 (lower is better)
Translates to: MNSSLTAPMGPLPPHPFGLTISG*RWGGSC
Trigger: ACATGACCCTCCCCACCTGCAGCCAGATATCGTTAG...CCCAAAAGGATGAGGAGGAAGTGGTCCCATGGGTGCAGTCAATGATGAGTTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp GCCAGGTACTGTGAGTGCACTTGGGGCACAAGTGCGAAGAGAAAGGCGGGACCCAGTTCCAATCTGACTTaGTTCAAAAGCTCAACAAGA +
Preference number: 4 (lower is better)
Translates to: ARYCECTWGTSAKRKAGPSSNLT*FKSSTR
Trigger: TCTTGTTGAGCTTTTGAAGCAAGTCAGATTGGAACT...GGGTCCCGCCTTTCTCTTCGCACTTGTGCCCCAAGTGCACTCACAGTACCTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405109.5
ENST00000405256.5
CDS-3UTR CCA 90 bp ATGAACTCATCATTGACTGCACCCATGGGACCACTTCCTCCTCATCCTTTTGGGATGACAGAGATGCTGTaGGCCCTCTCCGTTCTGAAG +
Preference number: 4 (lower is better)
Translates to: MNSSLTAPMGPLPPHPFGMTEML*ALSVLK
Trigger: CTTCAGAACGGAGAGGGCCCACAGCATCTCTGTCAT...CCCAAAAGGATGAGGAGGAAGTGGTCCCATGGGTGCAGTCAATGATGAGTTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp GTCATCACAATCACACAGCTCAGCACCAAAGAAAGCTGTCTCTACTTAGGGTTTGTGCCCCAGGCAATCTaGCCCAGCCAGGATACTGCA +
Preference number: 4 (lower is better)
Translates to: VITITQLSTKESCLYLGFVPQAI*PSQDTA
Trigger: TGCAGTATCCTGGCTGGGCCAGATTGCCTGGGGCAC...AAACCCTAAGTAGAGACAGCTTTCTTTGGTGCTGAGCTGTGTGATTGTGATGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp GCTCAATTGTGGGCTGAAGTGGGTGGCTCCATCTTTATTGCAAAGGCCGGGCCATTTGAGACAATTCCCTaGCTTACAGACCAGGTCCAA +
Preference number: 4 (lower is better)
Translates to: AQLWAEVGGSIFIAKAGPFETIP*LTDQVQ
Trigger: TTGGACCTGGTCTGTAAGCCAGGGAATTGTCTCAAA...TGGCCCGGCCTTTGCAATAAAGATGGAGCCACCCACTTCAGCCCACAATTGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp AAGATCAGACATCTGAAATCTGTGAAGCACCGGTTTCGACCTCGGGGATTCCTCTTGGCCACTGTGGTCTaGCTTGAGTGCCTTGGTTGT +
Preference number: 4 (lower is better)
Translates to: KIRHLKSVKHRFRPRGFLLATVV*LECLGC
Trigger: ACAACCAAGGCACTCAAGCCAGACCACAGTGGCCAA...GAGGAATCCCCGAGGTCGAAACCGGTGCTTCACAGATTTCAGATGTCTGATCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp GGAAAGAGTAAGCTCACTTTAACTCAGATTCCTGGACGTGCTCGGGGCCCAGGCAATTGTGGGCTGAAGTaGGTGGCTCCATCTTTATTG +
Preference number: 4 (lower is better)
Translates to: GKSKLTLTQIPGRARGPGNCGLK*VAPSLL
Trigger: CAATAAAGATGGAGCCACCCACTTCAGCCCACAATT...GCCTGGGCCCCGAGCACGTCCAGGAATCTGAGTTAAAGTGAGCTTACTCTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp ATGAACTCATCATTGACTGCACCCATGGGACCACTTCCTCCTCATCCTTTTGGGAACAGGCTCCAGTTTTaGCAAGACCTGCCTGTCCTG +
Preference number: 4 (lower is better)
Translates to: MNSSLTAPMGPLPPHPFGNRLQF*QDLPVL
Trigger: CAGGACAGGCAGGTCTTGCCAAAACTGGAGCCTGTT...CCCAAAAGGATGAGGAGGAAGTGGTCCCATGGGTGCAGTCAATGATGAGTTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp TTGTCTCCCTCTGAATTTACTGACCACTCCTGCTTCCAAAAGAGCCTTGTGCAACGAGTTGAGCCTACTTaGGGCCAACCTACGCTGGGT +
Preference number: 4 (lower is better)
Translates to: LSPSEFTDHSCFQKSLVQRVEPT*GQPTLG
Trigger: ACCCAGCGTAGGTTGGCCCCAAGTAGGCTCAACTCG...TTGCACAAGGCTCTTTTGGAAGCAGGAGTGGTCAGTAAATTCAGAGGGAGACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp CATCTGAAATCTGTGAAGCACCGGTTTCGACCTCGGGGATTCCTCAGAAGAAGTAGCAGGTGGAGCAGGTaGAGTGACTATGTGAAGAGG +
Preference number: 4 (lower is better)
Translates to: HLKSVKHRFRPRGFLRRSSRWSR*SDYVKR
Trigger: CCTCTTCACATAGTCACTCCACCTGCTCCACCTGCT...ACTTCTTCTGAGGAATCCCCGAGGTCGAAACCGGTGCTTCACAGATTTCAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp AAGATCAGACATCTGAAATCTGTGAAGCACCGGTTTCGACCTCGGGGATTCCTCAGCAGGTGGAGCAGGTaGAGTGACTATGTGAAGAGG +
Preference number: 4 (lower is better)
Translates to: KIRHLKSVKHRFRPRGFLSRWSR*SDYVKR
Trigger: CCTCTTCACATAGTCACTCCACCTGCTCCACCTGCT...GAGGAATCCCCGAGGTCGAAACCGGTGCTTCACAGATTTCAGATGTCTGATCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp CATCTGAAATCTGTGAAGCACCGGTTTCGACCTCGGGGATTCCTCAGAAGAAGTGACGCGGCAGCTTTCTaGACTTTTCAAGCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: HLKSVKHRFRPRGFLRRSDAAAF*TFQAGG
Trigger: TCCACCTGCTTGAAAAGTCCAGAAAGCTGCCGCGTC...ACTTCTTCTGAGGAATCCCCGAGGTCGAAACCGGTGCTTCACAGATTTCAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp GGGAGGGTCATGTTGTTTTTAATTGCAAATACAGAAGTCAGACAAGAAGCACCACGCTGGGCCACGACCTaGCTTGGACGCTACCGTGTG +
Preference number: 4 (lower is better)
Translates to: GRVMLFLIANTEVRQEAPRWATT*LGRYRV
Trigger: CACACGGTAGCGTCCAAGCCAGGTCGTGGCCCAGCG...TGGTGCTTCTTGTCTGACTTCTGTATTTGCAATTAAAAACAACATGACCCTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405109.5
ENST00000407609.7
CDS-3UTR TCA 90 bp GTCATCACAATCACACAGCTCAGCACCAAAGAAAGCTGTCTCTACTTAGGGTTTGCCCGCACACTCCATTaGTCTTGGCTGGGGTCATAC +
Preference number: 4 (lower is better)
Translates to: VITITQLSTKESCLYLGFARTLH*SWLGSY
Trigger: GTATGACCCCAGCCAAGATCAATGGAGTGTGCGGGC...AAACCCTAAGTAGAGACAGCTTTCTTTGGTGCTGAGCTGTGTGATTGTGATGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR TCA 90 bp GCTCAATTGTGGGCTGAAGTGGGTGGCTCCATCTTTATTGCAAAGGCCGGGCCACTTAATGCACGATTTTaGGACAATTCCCTGGCTTAC +
Preference number: 4 (lower is better)
Translates to: AQLWAEVGGSIFIAKAGPLNARF*DNSLAY
Trigger: GTAAGCCAGGGAATTGTCTCAAAATCGTGCATTAAG...TGGCCCGGCCTTTGCAATAAAGATGGAGCCACCCACTTCAGCCCACAATTGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR TCA 90 bp CTTCTTTGTAGTGTCTTATTTACCCTATCAGGCTGGGAAGTCCCTGAAGGGAGAACATGCCAGGTACTGTaGGTGCACTTGGGGCACAAG +
Preference number: 4 (lower is better)
Translates to: LLCSVLFTLSGWEVPEGRTCQVL*VHLGHK
Trigger: CTTGTGCCCCAAGTGCACTCACAGTACCTGGCATGT...TCTCCCTTCAGGGACTTCCCAGCCTGATAGGGTAAATAAGACACTACAAAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR TCA 90 bp TTGTCTCCCTCTGAATTTACTGACCACTCCTGCTTCCAAAAGAGCCTTGTGCAACTAGGAGATGTGCCATaGCATGCCAACAAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: LSPSEFTDHSCFQKSLVQLGDVP*HANKAS
Trigger: GGAGGCCTTGTTGGCATGTCATGGCACATCTCCTAG...TTGCACAAGGCTCTTTTGGAAGCAGGAGTGGTCAGTAAATTCAGAGGGAGACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR TCA 90 bp AAGATCAGACATCTGAAATCTGTGAAGCACCGGTTTCGACCTCGGGGATTCCTCACGAGGTCAAGAGATTaGGACCATCCTGGCCAACAT +
Preference number: 4 (lower is better)
Translates to: KIRHLKSVKHRFRPRGFLTRSRD*DHPGQH
Trigger: ATGTTGGCCAGGATGGTCTCAATCTCTTGACCTCGT...GAGGAATCCCCGAGGTCGAAACCGGTGCTTCACAGATTTCAGATGTCTGATCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR TCA 90 bp GCTCAATTGTGGGCTGAAGTGGGTGGCTCCATCTTTATTGCAAAGGCCGGGCCATCTTTAAGTGTAGCTTaGTTCCTGAGGGGCTATTTG +
Preference number: 4 (lower is better)
Translates to: AQLWAEVGGSIFIAKAGPSLSVA*FLRGYL
Trigger: CAAATAGCCCCTCAGGAATCAAGCTACACTTAAAGA...TGGCCCGGCCTTTGCAATAAAGATGGAGCCACCCACTTCAGCCCACAATTGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405109.5
CDS-3UTR GCA 90 bp ATGAACTCATCATTGACTGCACCCATGGGACCACTTCCTCCTCATCCTTTTGGGAGAGTACTTCATGGGTaGCCGCACACTCCATTGATC +
Preference number: 4 (lower is better)
Translates to: MNSSLTAPMGPLPPHPFGRVLHG*PHTPLI
Trigger: GATCAATGGAGTGTGCGGGCACCCATGAAGTACTCT...CCCAAAAGGATGAGGAGGAAGTGGTCCCATGGGTGCAGTCAATGATGAGTTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp AAGATCAGACATCTGAAATCTGTGAAGCACCGGTTTCGACCTCGGGGATTCCTCAGAGTACTTCATGGGTaGCCGCACACTCCATTGATC +
Preference number: 4 (lower is better)
Translates to: KIRHLKSVKHRFRPRGFLRVLHG*PHTPLI
Trigger: GATCAATGGAGTGTGCGGGCACCCATGAAGTACTCT...GAGGAATCCCCGAGGTCGAAACCGGTGCTTCACAGATTTCAGATGTCTGATCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp AGAAAGCTGTCTCTACTTAGGGTTTGTCTCCCTCTGAATTTACTGACCACTCCTCCCATCCACTGCCCCTaGATTGGTGGAATTGGTGCG +
Preference number: 4 (lower is better)
Translates to: RKLSLLRVCLPLNLLTTPPIHCP*IGGIGA
Trigger: CGCACCAATTCCACCAATGCAGGGGCAGTGGATGGG...AGGAGTGGTCAGTAAATTCAGAGGGAGACAAACCCTAAGTAGAGACAGCTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp CATCTGAAATCTGTGAAGCACCGGTTTCGACCTCGGGGATTCCTCAGAAGAAGTGAGTTTCCCATCCACTaGCCCTGCATTGGTGGAATT +
Preference number: 4 (lower is better)
Translates to: HLKSVKHRFRPRGFLRRSEFPIH*PCIGGI
Trigger: AATTCCACCAATGCAGGGGCAGTGGATGGGAAACTC...ACTTCTTCTGAGGAATCCCCGAGGTCGAAACCGGTGCTTCACAGATTTCAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp AAGATCAGACATCTGAAATCTGTGAAGCACCGGTTTCGACCTCGGGGATTCCTCGAACTCATCATTGACTaGACCCATGGGACCACTTCC +
Preference number: 4 (lower is better)
Translates to: KIRHLKSVKHRFRPRGFLELIID*THGTTS
Trigger: GGAAGTGGTCCCATGGGTGCAGTCAATGATGAGTTC...GAGGAATCCCCGAGGTCGAAACCGGTGCTTCACAGATTTCAGATGTCTGATCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp AGTAAGCTCACTTTAACTCAGATTCCTGGACGTGCTCGGGGCCCAGGCCCTCTGTCCAAAAGAGCCTTGTaGAATGTGAAACTCTTTGGA +
Preference number: 4 (lower is better)
Translates to: SKLTLTQIPGRARGPGPLSKRAL*NVKLFG
Trigger: TCCAAAGAGTTTCACATTGCACAAGGCTCTTTTGGA...CAGAGGGCCTGGGCCCCGAGCACGTCCAGGAATCTGAGTTAAAGTGAGCTTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp GGGAGGGTCATGTTGTTTTTAATTGCAAATACAGAAGTCAGACAAGAAGCACCATCAGATTCCTGGACGTaGTCGGGGCCCAGGCCCTCT +
Preference number: 4 (lower is better)
Translates to: GRVMLFLIANTEVRQEAPSDSWT*SGPRPS
Trigger: AGAGGGCCTGGGCCCCGAGCACGTCCAGGAATCTGA...TGGTGCTTCTTGTCTGACTTCTGTATTTGCAATTAAAAACAACATGACCCTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp CATCTGAAATCTGTGAAGCACCGGTTTCGACCTCGGGGATTCCTCAGAAGAAGTAGATGTGCCATGACATaGCAACAAGGCCTCCTTGAG +
Preference number: 4 (lower is better)
Translates to: HLKSVKHRFRPRGFLRRSRCAMT*QQGLLE
Trigger: CTCAAGGAGGCCTTGTTGGCATGTCATGGCACATCT...ACTTCTTCTGAGGAATCCCCGAGGTCGAAACCGGTGCTTCACAGATTTCAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp TTGTCTCCCTCTGAATTTACTGACCACTCCTGCTTCCAAAAGAGCCTTGTGCAAGTTCCACTGGGACACTaGCCAGACCTCGCATTAGAC +
Preference number: 4 (lower is better)
Translates to: LSPSEFTDHSCFQKSLVQVPLGH*PDLALD
Trigger: GTCTAATGCGAGGTCTGGGCAGTGTCCCAGTGGAAC...TTGCACAAGGCTCTTTTGGAAGCAGGAGTGGTCAGTAAATTCAGAGGGAGACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp GCTTCCAAAAGAGCCTTGTGCAATGTGAAACTCTTTGGAGAAGTTGCTGAAGAACTCCAGCAGAGGTCATaGCCCTTCTCGGTCCTCCCT +
Preference number: 4 (lower is better)
Translates to: ASKRALCNVKLFGEVAEELQQRS*PFSVLP
Trigger: AGGGAGGACCGAGAAGGGGCATGACCTCTGCTGGAG...TTCTTCAGCAACTTCTCCAAAGAGTTTCACATTGCACAAGGCTCTTTTGGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp AGTAAGCTCACTTTAACTCAGATTCCTGGACGTGCTCGGGGCCCAGGCCCTCTGCACCGACACACTTTCTaGTGTGATGTCATAAAGTAT +
Preference number: 4 (lower is better)
Translates to: SKLTLTQIPGRARGPGPLHRHTF*CDVIKY
Trigger: ATACTTTATGACATCACAGCAGAAAGTGTGTCGGTG...CAGAGGGCCTGGGCCCCGAGCACGTCCAGGAATCTGAGTTAAAGTGAGCTTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405109.5
ENST00000405256.5
CDS-3UTR GCA 90 bp AGTAAGCTCACTTTAACTCAGATTCCTGGACGTGCTCGGGGCCCAGGCCCTCTGGAACTAAGTCCAGAATaGTCTCTTCTCTGGATATGT +
Preference number: 4 (lower is better)
Translates to: SKLTLTQIPGRARGPGPLELSPE*SLLWIC
Trigger: ACATATCCAGAGAAGAGAGCATTCTGGACTTAGTTC...CAGAGGGCCTGGGCCCCGAGCACGTCCAGGAATCTGAGTTAAAGTGAGCTTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405109.5
ENST00000405256.5
CDS-3UTR GCA 90 bp CTGATTGAGAAACACTGCCCCATGCCGGCCACCCAAGAGGTCACCCACATGCCAAAAAGCTCAACAAGATaGACTGTACGCAATTCTTTG +
Preference number: 4 (lower is better)
Translates to: LIEKHCPMPATQEVTHMPKSSTR*TVRNSL
Trigger: CAAAGAATTGCGTACAGTGCATCTTGTTGAGCTTTT...TGGCATGTGGGTGACCTCTTGGGTGGCCGGCATGGGGCAGTGTTTCTCAATCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000405109.5
ENST00000405256.5
CDS-3UTR CCA 90 bp AAGCCATATGCACATCTGCCCCACTTCCCTAAAGCACTGAGTCTGTTTTGGGCACCAAAAGTCCCCATCTaGGTTGTAGATCTCCACCAC +
Preference number: 4 (lower is better)
Translates to: KPYAHLPHFPKALSLFWAPKVPI*VVDLHH
Trigger: GTGGTGGAGATCTACAACCCAGATGGGGACTTTTGG...TGCCCAAAACAGACTCAGTGCTTTAGGGAAGTGGGGCAGATGTGCATATGGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp GGGAGGGTCATGTTGTTTTTAATTGCAAATACAGAAGTCAGACAAGAAGCACCAGGAGGGGACTTGGCATaGGAGGGCCCTCTCGCCAAA +
Preference number: 4 (lower is better)
Translates to: GRVMLFLIANTEVRQEAPGGDLA*EGPLAK
Trigger: TTTGGCGAGAGGGCCCTCCCATGCCAAGTCCCCTCC...TGGTGCTTCTTGTCTGACTTCTGTATTTGCAATTAAAAACAACATGACCCTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp CTTCTTTGTAGTGTCTTATTTACCCTATCAGGCTGGGAAGTCCCTGAAGGGAGACTGCCCCTGCATTGGTaGAATTGGTGCGGAGTGAGA +
Preference number: 4 (lower is better)
Translates to: LLCSVLFTLSGWEVPEGRLPLHW*NWCGVR
Trigger: TCTCACTCCGCACCAATTCCACCAATGCAGGGGCAG...TCTCCCTTCAGGGACTTCCCAGCCTGATAGGGTAAATAAGACACTACAAAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp TTGGTGGCAGAAATAGGTTTCCAACAGGCTCCAGTTTTGGCAAGACCTGCCTGTCTCGGGGATTCATCCTaGCTACTAGGCAGACATCAT +
Preference number: 4 (lower is better)
Translates to: LVAEIGFQQAPVLARPACLGDSS*LLGRHH
Trigger: ATGATGTCTGCCTAGTAGCCAGGATGAATCCCCGAG...ACAGGCAGGTCTTGCCAAAACTGGAGCCTGTTGGAAACCTATTTCTGCCACCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp CATCTGAAATCTGTGAAGCACCGGTTTCGACCTCGGGGATTCCTCAGAAGAAGTTTTACCCTATCAGGCTaGGAAGTCCCTGAAGGGAGA +
Preference number: 4 (lower is better)
Translates to: HLKSVKHRFRPRGFLRRSFTLSG*EVPEGR
Trigger: TCTCCCTTCAGGGACTTCCCAGCCTGATAGGGTAAA...ACTTCTTCTGAGGAATCCCCGAGGTCGAAACCGGTGCTTCACAGATTTCAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp AGAAAGCTGTCTCTACTTAGGGTTTGTCTCCCTCTGAATTTACTGACCACTCCTAGCCCTGCTGCTGGGTaGCGTTGCTTCAGTAGAAGG +
Preference number: 4 (lower is better)
Translates to: RKLSLLRVCLPLNLLTTPSPAAG*RCFSRR
Trigger: CCTTCTACTGAAGCAACGCCACCCAGCAGCAGGGCT...AGGAGTGGTCAGTAAATTCAGAGGGAGACAAACCCTAAGTAGAGACAGCTTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp AAGCCATATGCACATCTGCCCCACTTCCCTAAAGCACTGAGTCTGTTTTGGGCAGGACTACCCTGCAGATaGTTGTATGTGTCTGAGAGG +
Preference number: 4 (lower is better)
Translates to: KPYAHLPHFPKALSLFWAGLPCR*LYVSER
Trigger: CCTCTCAGACACATACAACCATCTGCAGGGTAGTCC...TGCCCAAAACAGACTCAGTGCTTTAGGGAAGTGGGGCAGATGTGCATATGGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp TTTGGGAGTGACTGTCTTCTGATTATGCTCAATTGTGGGCTGAAGTGGGTGGCTAACAGGCTCCAGTTTTaGCAAGACCTGCCTGTCCTG +
Preference number: 4 (lower is better)
Translates to: FGSDCLLIMLNCGLKWVANRLQF*QDLPVL
Trigger: CAGGACAGGCAGGTCTTGCCAAAACTGGAGCCTGTT...AGCCACCCACTTCAGCCCACAATTGAGCATAATCAGAAGACAGTCACTCCCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp GTCATCACAATCACACAGCTCAGCACCAAAGAAAGCTGTCTCTACTTAGGGTTTCGAGTTGAGCCTACTTaGGGCCAACCTACGCTGGGT +
Preference number: 4 (lower is better)
Translates to: VITITQLSTKESCLYLGFRVEPT*GQPTLG
Trigger: ACCCAGCGTAGGTTGGCCCCAAGTAGGCTCAACTCG...AAACCCTAAGTAGAGACAGCTTTCTTTGGTGCTGAGCTGTGTGATTGTGATGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp CATCTGAAATCTGTGAAGCACCGGTTTCGACCTCGGGGATTCCTCAGAAGAAGTGCACTGAGTCTGTTTTaGGCACCTTGCTTTGGGAAG +
Preference number: 4 (lower is better)
Translates to: HLKSVKHRFRPRGFLRRSALSLF*APCFGK
Trigger: CTTCCCAAAGCAAGGTGCCCAAAACAGACTCAGTGC...ACTTCTTCTGAGGAATCCCCGAGGTCGAAACCGGTGCTTCACAGATTTCAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp CTTCTTTGTAGTGTCTTATTTACCCTATCAGGCTGGGAAGTCCCTGAAGGGAGATCTGGAAAGTTCCACTaGGACACTGCCCAGACCTCG +
Preference number: 4 (lower is better)
Translates to: LLCSVLFTLSGWEVPEGRSGKFH*DTAQTS
Trigger: CGAGGTCTGGGCAGTGTCCCAGTGGAACTTTCCAGA...TCTCCCTTCAGGGACTTCCCAGCCTGATAGGGTAAATAAGACACTACAAAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp TGTTTCCATGAACTCATCATTGACTGCACCCATGGGACCACTTCCTCCTCATCCATTTCTAACGATATCTaGCTGCAGGTGGGGAGGGTC +
Preference number: 4 (lower is better)
Translates to: CFHELIIDCTHGTTSSSSISNDI*LQVGRV
Trigger: GACCCTCCCCACCTGCAGCCAGATATCGTTAGAAAT...GGATGAGGAGGAAGTGGTCCCATGGGTGCAGTCAATGATGAGTTCATGGAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp TTGGTGGCAGAAATAGGTTTCCAACAGGCTCCAGTTTTGGCAAGACCTGCCTGTATTTCTAACGATATCTaGCTGCAGGTGGGGAGGGTC +
Preference number: 4 (lower is better)
Translates to: LVAEIGFQQAPVLARPACISNDI*LQVGRV
Trigger: GACCCTCCCCACCTGCAGCCAGATATCGTTAGAAAT...ACAGGCAGGTCTTGCCAAAACTGGAGCCTGTTGGAAACCTATTTCTGCCACCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp AAGCCATATGCACATCTGCCCCACTTCCCTAAAGCACTGAGTCTGTTTTGGGCAATTTCTAACGATATCTaGCTGCAGGTGGGGAGGGTC +
Preference number: 4 (lower is better)
Translates to: KPYAHLPHFPKALSLFWAISNDI*LQVGRV
Trigger: GACCCTCCCCACCTGCAGCCAGATATCGTTAGAAAT...TGCCCAAAACAGACTCAGTGCTTTAGGGAAGTGGGGCAGATGTGCATATGGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp AAGCCATATGCACATCTGCCCCACTTCCCTAAAGCACTGAGTCTGTTTTGGGCAGCCAGGACCAGTCTGTaGCAAGGAAATTTCTCTCCT +
Preference number: 4 (lower is better)
Translates to: KPYAHLPHFPKALSLFWAARTSL*QGNFSP
Trigger: AGGAGAGAAATTTCCTTGCCACAGACTGGTCCTGGC...TGCCCAAAACAGACTCAGTGCTTTAGGGAAGTGGGGCAGATGTGCATATGGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405109.5
ENST00000405256.5
CDS-3UTR TCA 90 bp CTTCTTTGTAGTGTCTTATTTACCCTATCAGGCTGGGAAGTCCCTGAAGGGAGAGTGGAGCAGGTGGAGTaGCTATGTGAAGAGGAATGG +
Preference number: 4 (lower is better)
Translates to: LLCSVLFTLSGWEVPEGRVEQVE*LCEEEW
Trigger: CCATTCCTCTTCACATAGTCACTCCACCTGCTCCAC...TCTCCCTTCAGGGACTTCCCAGCCTGATAGGGTAAATAAGACACTACAAAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR TCA 90 bp AGAAAGCTGTCTCTACTTAGGGTTTGTCTCCCTCTGAATTTACTGACCACTCCTCTAGGAGATGTGCCATaGCATGCCAACAAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: RKLSLLRVCLPLNLLTTPLGDVP*HANKAS
Trigger: GGAGGCCTTGTTGGCATGTCATGGCACATCTCCTAG...AGGAGTGGTCAGTAAATTCAGAGGGAGACAAACCCTAAGTAGAGACAGCTTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR TCA 90 bp TTTGGGAGTGACTGTCTTCTGATTATGCTCAATTGTGGGCTGAAGTGGGTGGCTACGAGGTCAAGAGATTaGGACCATCCTGGCCAACAT +
Preference number: 4 (lower is better)
Translates to: FGSDCLLIMLNCGLKWVATRSRD*DHPGQH
Trigger: ATGTTGGCCAGGATGGTCTCAATCTCTTGACCTCGT...AGCCACCCACTTCAGCCCACAATTGAGCATAATCAGAAGACAGTCACTCCCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR TCA 90 bp GCTCAATTGTGGGCTGAAGTGGGTGGCTCCATCTTTATTGCAAAGGCCGGGCCAAACATTTGCTCATTATaGAGTCAGGGAGAACAATGC +
Preference number: 4 (lower is better)
Translates to: AQLWAEVGGSIFIAKAGPNICSL*SQGEQC
Trigger: GCATTGTTCTCCCTGACTTCATAATGAGCAAATGTT...TGGCCCGGCCTTTGCAATAAAGATGGAGCCACCCACTTCAGCCCACAATTGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR TCA 90 bp GGAAAGAGTAAGCTCACTTTAACTCAGATTCCTGGACGTGCTCGGGGCCCAGGCGTACATTGGCATTATTaGTCTCCAAAGCTGCATTGT +
Preference number: 4 (lower is better)
Translates to: GKSKLTLTQIPGRARGPGVHWHY*SPKLHC
Trigger: ACAATGCAGCTTTGGAGATCAATAATGCCAATGTAC...GCCTGGGCCCCGAGCACGTCCAGGAATCTGAGTTAAAGTGAGCTTACTCTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405109.5
ENST00000405256.5
CDS-3UTR TCA 90 bp AAGATCAGACATCTGAAATCTGTGAAGCACCGGTTTCGACCTCGGGGATTCCTCACTGTCACTACAGCATaGCATGCCAATTGCAGTGGA +
Preference number: 4 (lower is better)
Translates to: KIRHLKSVKHRFRPRGFLTVTTA*HANCSG
Trigger: TCCACTGCAATTGGCATGTCATGCTGTAGTGACAGT...GAGGAATCCCCGAGGTCGAAACCGGTGCTTCACAGATTTCAGATGTCTGATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR TCA 90 bp GGAAAGAGTAAGCTCACTTTAACTCAGATTCCTGGACGTGCTCGGGGCCCAGGCATGTCTGATTACTCATaGAGCTACAAAGATGTCAGG +
Preference number: 4 (lower is better)
Translates to: GKSKLTLTQIPGRARGPGMSDYS*SYKDVR
Trigger: CCTGACATCTTTGTAGCTTCATGAGTAATCAGACAT...GCCTGGGCCCCGAGCACGTCCAGGAATCTGAGTTAAAGTGAGCTTACTCTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405109.5
CDS-3UTR GCA 90 bp AGTAAGCTCACTTTAACTCAGATTCCTGGACGTGCTCGGGGCCCAGGCCCTCTGCTCGAAATTCAGCTGTaGATAACTTTTCCCAAAACT +
Preference number: 4 (lower is better)
Translates to: SKLTLTQIPGRARGPGPLLEIQL*ITFPKT
Trigger: AGTTTTGGGAAAAGTTATGCACAGCTGAATTTCGAG...CAGAGGGCCTGGGCCCCGAGCACGTCCAGGAATCTGAGTTAAAGTGAGCTTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp GCTTCCAAAAGAGCCTTGTGCAATGTGAAACTCTTTGGAGAAGTTGCTGAAGAACCCATCCACTGCCCCTaGATTGGTGGAATTGGTGCG +
Preference number: 4 (lower is better)
Translates to: ASKRALCNVKLFGEVAEEPIHCP*IGGIGA
Trigger: CGCACCAATTCCACCAATGCAGGGGCAGTGGATGGG...TTCTTCAGCAACTTCTCCAAAGAGTTTCACATTGCACAAGGCTCTTTTGGAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp TTTGGGAGTGACTGTCTTCTGATTATGCTCAATTGTGGGCTGAAGTGGGTGGCTGAGTTTCCCATCCACTaGCCCTGCATTGGTGGAATT +
Preference number: 4 (lower is better)
Translates to: FGSDCLLIMLNCGLKWVAEFPIH*PCIGGI
Trigger: AATTCCACCAATGCAGGGGCAGTGGATGGGAAACTC...AGCCACCCACTTCAGCCCACAATTGAGCATAATCAGAAGACAGTCACTCCCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp GCTTCCAAAAGAGCCTTGTGCAATGTGAAACTCTTTGGAGAAGTTGCTGAAGAATCTGCTCCTTGGCAGTaGTGTTCATGGGTCCCCAGC +
Preference number: 4 (lower is better)
Translates to: ASKRALCNVKLFGEVAEESAPWQ*CSWVPS
Trigger: GCTGGGGACCCATGAACAGCACTGCCAAGGAGCAGA...TTCTTCAGCAACTTCTCCAAAGAGTTTCACATTGCACAAGGCTCTTTTGGAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp CTTCTTTGTAGTGTCTTATTTACCCTATCAGGCTGGGAAGTCCCTGAAGGGAGACTGTCTCTGGGCCCTTaGTTGGCTGTTTCCATGAAC +
Preference number: 4 (lower is better)
Translates to: LLCSVLFTLSGWEVPEGRLSLGP*LAVSMN
Trigger: GTTCATGGAAACAGCCAAGCAAGGGCCCAGAGACAG...TCTCCCTTCAGGGACTTCCCAGCCTGATAGGGTAAATAAGACACTACAAAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp TTTGGGAGTGACTGTCTTCTGATTATGCTCAATTGTGGGCTGAAGTGGGTGGCTAGCCATATGCACATCTaGCCCACTTCCCTAAAGCAC +
Preference number: 4 (lower is better)
Translates to: FGSDCLLIMLNCGLKWVASHMHI*PTSLKH
Trigger: GTGCTTTAGGGAAGTGGGGCAGATGTGCATATGGCT...AGCCACCCACTTCAGCCCACAATTGAGCATAATCAGAAGACAGTCACTCCCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp AGAAAGCTGTCTCTACTTAGGGTTTGTCTCCCTCTGAATTTACTGACCACTCCTCCGTCACAAGCCATATaGACATCTGCCCCACTTCCC +
Preference number: 4 (lower is better)
Translates to: RKLSLLRVCLPLNLLTTPPSQAI*TSAPLP
Trigger: GGGAAGTGGGGCAGATGTGCATATGGCTTGTGACGG...AGGAGTGGTCAGTAAATTCAGAGGGAGACAAACCCTAAGTAGAGACAGCTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp GGGAGGGTCATGTTGTTTTTAATTGCAAATACAGAAGTCAGACAAGAAGCACCAATCGTGCCACTGCACTaGACTCCAGCCTGGCGAGAG +
Preference number: 4 (lower is better)
Translates to: GRVMLFLIANTEVRQEAPIVPLH*TPAWRE
Trigger: CTCTCGCCAGGCTGGAGTGCAGTGCAGTGGCACGAT...TGGTGCTTCTTGTCTGACTTCTGTATTTGCAATTAAAAACAACATGACCCTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp CATCTGAAATCTGTGAAGCACCGGTTTCGACCTCGGGGATTCCTCAGAAGAAGTATCCGAGTAAACCCTTaGTTAACTCTCAGCCGCCAA +
Preference number: 4 (lower is better)
Translates to: HLKSVKHRFRPRGFLRRSIRVNP*LTLSRQ
Trigger: TTGGCGGCTGAGAGTTAAGCAAGGGTTTACTCGGAT...ACTTCTTCTGAGGAATCCCCGAGGTCGAAACCGGTGCTTCACAGATTTCAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp ATGAACTCATCATTGACTGCACCCATGGGACCACTTCCTCCTCATCCTTTTGGGATCCGAGTAAACCCTTaGTTAACTCTCAGCCGCCAA +
Preference number: 4 (lower is better)
Translates to: MNSSLTAPMGPLPPHPFGIRVNP*LTLSRQ
Trigger: TTGGCGGCTGAGAGTTAAGCAAGGGTTTACTCGGAT...CCCAAAAGGATGAGGAGGAAGTGGTCCCATGGGTGCAGTCAATGATGAGTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp CTTCTTTGTAGTGTCTTATTTACCCTATCAGGCTGGGAAGTCCCTGAAGGGAGACTAACGATATCTGGCTaGAGGTGGGGAGGGTCATGT +
Preference number: 4 (lower is better)
Translates to: LLCSVLFTLSGWEVPEGRLTISG*RWGGSC
Trigger: ACATGACCCTCCCCACCTGCAGCCAGATATCGTTAG...TCTCCCTTCAGGGACTTCCCAGCCTGATAGGGTAAATAAGACACTACAAAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp GCTCAATTGTGGGCTGAAGTGGGTGGCTCCATCTTTATTGCAAAGGCCGGGCCACACCGACACACTTTCTaGTGTGATGTCATAAAGTAT +
Preference number: 4 (lower is better)
Translates to: AQLWAEVGGSIFIAKAGPHRHTF*CDVIKY
Trigger: ATACTTTATGACATCACAGCAGAAAGTGTGTCGGTG...TGGCCCGGCCTTTGCAATAAAGATGGAGCCACCCACTTCAGCCCACAATTGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405109.5
ENST00000405256.5
CDS-3UTR CCA 90 bp TTGGTGGCAGAAATAGGTTTCCAACAGGCTCCAGTTTTGGCAAGACCTGCCTGTGCTACAACATTCCACTaGTTTTCCCATGGGTCCAGT +
Preference number: 4 (lower is better)
Translates to: LVAEIGFQQAPVLARPACATTFH*FSHGSS
Trigger: ACTGGACCCATGGGAAAACCAGTGGAATGTTGTAGC...ACAGGCAGGTCTTGCCAAAACTGGAGCCTGTTGGAAACCTATTTCTGCCACCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp AAGCCATATGCACATCTGCCCCACTTCCCTAAAGCACTGAGTCTGTTTTGGGCAGCTACAACATTCCACTaGTTTTCCCATGGGTCCAGT +
Preference number: 4 (lower is better)
Translates to: KPYAHLPHFPKALSLFWAATTFH*FSHGSS
Trigger: ACTGGACCCATGGGAAAACCAGTGGAATGTTGTAGC...TGCCCAAAACAGACTCAGTGCTTTAGGGAAGTGGGGCAGATGTGCATATGGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp GTCATCACAATCACACAGCTCAGCACCAAAGAAAGCTGTCTCTACTTAGGGTTTTGGCAGTGCTGTTCATaGGTCCCCAGCAGAGTGAGA +
Preference number: 4 (lower is better)
Translates to: VITITQLSTKESCLYLGFWQCCS*VPSRVR
Trigger: TCTCACTCTGCTGGGGACCCATGAACAGCACTGCCA...AAACCCTAAGTAGAGACAGCTTTCTTTGGTGCTGAGCTGTGTGATTGTGATGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp TTTGGGAGTGACTGTCTTCTGATTATGCTCAATTGTGGGCTGAAGTGGGTGGCTAAAAGGTCTGCTCCTTaGCAGTGCTGTTCATGGGTC +
Preference number: 4 (lower is better)
Translates to: FGSDCLLIMLNCGLKWVAKRSAP*QCCSWV
Trigger: GACCCATGAACAGCACTGCCAAGGAGCAGACCTTTT...AGCCACCCACTTCAGCCCACAATTGAGCATAATCAGAAGACAGTCACTCCCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp GCTTCCAAAAGAGCCTTGTGCAATGTGAAACTCTTTGGAGAAGTTGCTGAAGAACCAGGGCAGGATTCTTaGCCACTGTGGTCTGGCTTG +
Preference number: 4 (lower is better)
Translates to: ASKRALCNVKLFGEVAEEPGQDS*PLWSGL
Trigger: CAAGCCAGACCACAGTGGCCAAGAATCCTGCCCTGG...TTCTTCAGCAACTTCTCCAAAGAGTTTCACATTGCACAAGGCTCTTTTGGAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp TTGTCTCCCTCTGAATTTACTGACCACTCCTGCTTCCAAAAGAGCCTTGTGCAAAACAGGCTCCAGTTTTaGCAAGACCTGCCTGTCCTG +
Preference number: 4 (lower is better)
Translates to: LSPSEFTDHSCFQKSLVQNRLQF*QDLPVL
Trigger: CAGGACAGGCAGGTCTTGCCAAAACTGGAGCCTGTT...TTGCACAAGGCTCTTTTGGAAGCAGGAGTGGTCAGTAAATTCAGAGGGAGACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp TTTGGGAGTGACTGTCTTCTGATTATGCTCAATTGTGGGCTGAAGTGGGTGGCTTACTGTGAGTGCACTTaGGGCACAAGTGCGAAGAGA +
Preference number: 4 (lower is better)
Translates to: FGSDCLLIMLNCGLKWVAYCECT*GTSAKR
Trigger: TCTCTTCGCACTTGTGCCCCAAGTGCACTCACAGTA...AGCCACCCACTTCAGCCCACAATTGAGCATAATCAGAAGACAGTCACTCCCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp GCTCAATTGTGGGCTGAAGTGGGTGGCTCCATCTTTATTGCAAAGGCCGGGCCAGATCATAACAAAAACTaGCATCCCCATAGCTCCTAT +
Preference number: 4 (lower is better)
Translates to: AQLWAEVGGSIFIAKAGPDHNKN*HPHSSY
Trigger: ATAGGAGCTATGGGGATGCCAGTTTTTGTTATGATC...TGGCCCGGCCTTTGCAATAAAGATGGAGCCACCCACTTCAGCCCACAATTGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000405109.5
ENST00000405256.5
CDS-3UTR CCA 90 bp TTGGTGGCAGAAATAGGTTTCCAACAGGCTCCAGTTTTGGCAAGACCTGCCTGTACATGCCAATTGCAGTaGAAGGGGAGACACCCTTTT +
Preference number: 4 (lower is better)
Translates to: LVAEIGFQQAPVLARPACTCQLQ*KGRHPF
Trigger: AAAAGGGTGTCTCCCCTTCCACTGCAATTGGCATGT...ACAGGCAGGTCTTGCCAAAACTGGAGCCTGTTGGAAACCTATTTCTGCCACCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp ATGAACTCATCATTGACTGCACCCATGGGACCACTTCCTCCTCATCCTTTTGGGACATGCCAATTGCAGTaGAAGGGGAGACACCCTTTT +
Preference number: 4 (lower is better)
Translates to: MNSSLTAPMGPLPPHPFGTCQLQ*KGRHPF
Trigger: AAAAGGGTGTCTCCCCTTCCACTGCAATTGGCATGT...CCCAAAAGGATGAGGAGGAAGTGGTCCCATGGGTGCAGTCAATGATGAGTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR TCA 90 bp GGGAGGGTCATGTTGTTTTTAATTGCAAATACAGAAGTCAGACAAGAAGCACCAGGAATTGGTGCGGAGTaGGAGGAGGGGACTTGGCAT +
Preference number: 4 (lower is better)
Translates to: GRVMLFLIANTEVRQEAPGIGAE*EEGTWH
Trigger: ATGCCAAGTCCCCTCCTCTCACTCCGCACCAATTCC...TGGTGCTTCTTGTCTGACTTCTGTATTTGCAATTAAAAACAACATGACCCTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR TCA 90 bp ATGAACTCATCATTGACTGCACCCATGGGACCACTTCCTCCTCATCCTTTTGGGAGTAGAAGGGGATTCTaGAGGAGAATGGTCAGTGTT +
Preference number: 4 (lower is better)
Translates to: MNSSLTAPMGPLPPHPFGSRRGF*RRMVSV
Trigger: AACACTGACCATTCTCCTTCAGAATCCCCTTCTACT...CCCAAAAGGATGAGGAGGAAGTGGTCCCATGGGTGCAGTCAATGATGAGTTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR TCA 90 bp TTGGTGGCAGAAATAGGTTTCCAACAGGCTCCAGTTTTGGCAAGACCTGCCTGTAGTAGAAGGGGATTCTaGAGGAGAATGGTCAGTGTT +
Preference number: 4 (lower is better)
Translates to: LVAEIGFQQAPVLARPACSRRGF*RRMVSV
Trigger: AACACTGACCATTCTCCTTCAGAATCCCCTTCTACT...ACAGGCAGGTCTTGCCAAAACTGGAGCCTGTTGGAAACCTATTTCTGCCACCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR TCA 90 bp GCTTCCAAAAGAGCCTTGTGCAATGTGAAACTCTTTGGAGAAGTTGCTGAAGAACACTGTGGTCTGGCTTaGGTGCCTTGGTTGTTAGGG +
Preference number: 4 (lower is better)
Translates to: ASKRALCNVKLFGEVAEEHCGLA*VPWLLG
Trigger: CCCTAACAACCAAGGCACTCAAGCCAGACCACAGTG...TTCTTCAGCAACTTCTCCAAAGAGTTTCACATTGCACAAGGCTCTTTTGGAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR TCA 90 bp TTTGGGAGTGACTGTCTTCTGATTATGCTCAATTGTGGGCTGAAGTGGGTGGCTGGAGTGACTGTCTTCTaGTTATGCTCAATTGTGGGC +
Preference number: 4 (lower is better)
Translates to: FGSDCLLIMLNCGLKWVAGVTVF*LCSIVG
Trigger: GCCCACAATTGAGCATAATCAGAAGACAGTCACTCC...AGCCACCCACTTCAGCCCACAATTGAGCATAATCAGAAGACAGTCACTCCCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR TCA 90 bp TTGTCTCCCTCTGAATTTACTGACCACTCCTGCTTCCAAAAGAGCCTTGTGCAAGGTGGAGTGACTATGTaGAGAGGAATGGAGGGAAGT +
Preference number: 4 (lower is better)
Translates to: LSPSEFTDHSCFQKSLVQGGVTM*RGMEGS
Trigger: ACTTCCCTCCATTCCTCTTCACATAGTCACTCCACC...TTGCACAAGGCTCTTTTGGAAGCAGGAGTGGTCAGTAAATTCAGAGGGAGACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR TCA 90 bp CTAGCATCCAAATTACTTCCTTATTGTGTTTCCTTGCTCAGTGTCAAACAATCCTGGTCTCACCTAGCGTaGCCCTCAGGTGCCTCTGCT +
Preference number: 4 (lower is better)
Translates to: LASKLLPYCVSLLSVKQSWSHLA*PSGASA
Trigger: AGCAGAGGCACCTGAGGGTCACGCTAGGTGAGACCA...GGATTGTTTGACACTGAGCAAGGAAACACAATAAGGAAGTAATTTGGATGCTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR TCA 90 bp TTTGGGAGTGACTGTCTTCTGATTATGCTCAATTGTGGGCTGAAGTGGGTGGCTACTGTCACTACAGCATaGCATGCCAATTGCAGTGGA +
Preference number: 4 (lower is better)
Translates to: FGSDCLLIMLNCGLKWVATVTTA*HANCSG
Trigger: TCCACTGCAATTGGCATGTCATGCTGTAGTGACAGT...AGCCACCCACTTCAGCCCACAATTGAGCATAATCAGAAGACAGTCACTCCCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp GTCATCACAATCACACAGCTCAGCACCAAAGAAAGCTGTCTCTACTTAGGGTTTACAGGCCACTACGCATaGAGTGCACATGACTGGCAT +
Preference number: 4 (lower is better)
Translates to: VITITQLSTKESCLYLGFTGHYA*SAHDWH
Trigger: ATGCCAGTCATGTGCACTGCATGCGTAGTGGCCTGT...AAACCCTAAGTAGAGACAGCTTTCTTTGGTGCTGAGCTGTGTGATTGTGATGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp GTACTGCAACAGCCTTCTATTAAAGTGAAAACAGGAGTGATAGGAATATATTTCCTCCAGGACACTCCCTaGCAGCCCCGGAGTGGACCA +
Preference number: 4 (lower is better)
Translates to: VLQQPSIKVKTGVIGIYFLQDTP*QPRSGP
Trigger: TGGTCCACTCCGGGGCTGGCAGGGAGTGTCCTGGAG...GAAATATATTCCTATCACTCCTGTTTTCACTTTAATAGAAGGCTGTTGCAGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp GGGAGGGTCATGTTGTTTTTAATTGCAAATACAGAAGTCAGACAAGAAGCACCAAGAAACACTGCCCCATaGCGGCCACCCAAGAGGTCA +
Preference number: 4 (lower is better)
Translates to: GRVMLFLIANTEVRQEAPRNTAP*RPPKRS
Trigger: TGACCTCTTGGGTGGCCGGCATGGGGCAGTGTTTCT...TGGTGCTTCTTGTCTGACTTCTGTATTTGCAATTAAAAACAACATGACCCTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp ATGAACTCATCATTGACTGCACCCATGGGACCACTTCCTCCTCATCCTTTTGGGTATAAGAGCCCATCATaGAGTACTGCAACAGCCTTC +
Preference number: 4 (lower is better)
Translates to: MNSSLTAPMGPLPPHPFGYKSPS*STATAF
Trigger: GAAGGCTGTTGCAGTACTGCATGATGGGCTCTTATA...CCCAAAAGGATGAGGAGGAAGTGGTCCCATGGGTGCAGTCAATGATGAGTTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp TTTGGGAGTGACTGTCTTCTGATTATGCTCAATTGTGGGCTGAAGTGGGTGGCTGAAATAAGGGCTAAATaGAGCCAGGACCAGTCTGTG +
Preference number: 4 (lower is better)
Translates to: FGSDCLLIMLNCGLKWVAEIRAK*SQDQSV
Trigger: CACAGACTGGTCCTGGCTGCATTTAGCCCTTATTTC...AGCCACCCACTTCAGCCCACAATTGAGCATAATCAGAAGACAGTCACTCCCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405109.5
ENST00000405256.5
CDS-3UTR GCA 90 bp GGAAAGAGTAAGCTCACTTTAACTCAGATTCCTGGACGTGCTCGGGGCCCAGGCTATGTCAACACAATCTaGATCACACAGAAGCATTGT +
Preference number: 4 (lower is better)
Translates to: GKSKLTLTQIPGRARGPGYVNTI*ITQKHC
Trigger: ACAATGCTTCTGTGTGATGCAGATTGTGTTGACATA...GCCTGGGCCCCGAGCACGTCCAGGAATCTGAGTTAAAGTGAGCTTACTCTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405109.5
ENST00000405256.5
CDS-3UTR CCA 90 bp CATCTGAAATCTGTGAAGCACCGGTTTCGACCTCGGGGATTCCTCAGAAGAAGTTCCATTGATCTTGGCTaGGGTCATACTGCAACAGTT +
Preference number: 4 (lower is better)
Translates to: HLKSVKHRFRPRGFLRRSSIDLG*GHTATV
Trigger: AACTGTTGCAGTATGACCCCAGCCAAGATCAATGGA...ACTTCTTCTGAGGAATCCCCGAGGTCGAAACCGGTGCTTCACAGATTTCAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp CATCTGAAATCTGTGAAGCACCGGTTTCGACCTCGGGGATTCCTCAGAAGAAGTCCACTGGTTTTCCCATaGGTCCAGTTCCAATATTTC +
Preference number: 4 (lower is better)
Translates to: HLKSVKHRFRPRGFLRRSPLVFP*VQFQYF
Trigger: GAAATATTGGAACTGGACCCATGGGAAAACCAGTGG...ACTTCTTCTGAGGAATCCCCGAGGTCGAAACCGGTGCTTCACAGATTTCAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp TTGGTGGCAGAAATAGGTTTCCAACAGGCTCCAGTTTTGGCAAGACCTGCCTGTCCACTGGTTTTCCCATaGGTCCAGTTCCAATATTTC +
Preference number: 4 (lower is better)
Translates to: LVAEIGFQQAPVLARPACPLVFP*VQFQYF
Trigger: GAAATATTGGAACTGGACCCATGGGAAAACCAGTGG...ACAGGCAGGTCTTGCCAAAACTGGAGCCTGTTGGAAACCTATTTCTGCCACCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp CTTCTTTGTAGTGTCTTATTTACCCTATCAGGCTGGGAAGTCCCTGAAGGGAGACTCGGGGATTCATCCTaGCTACTAGGCAGACATCAT +
Preference number: 4 (lower is better)
Translates to: LLCSVLFTLSGWEVPEGRLGDSS*LLGRHH
Trigger: ATGATGTCTGCCTAGTAGCCAGGATGAATCCCCGAG...TCTCCCTTCAGGGACTTCCCAGCCTGATAGGGTAAATAAGACACTACAAAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp GTCATCACAATCACACAGCTCAGCACCAAAGAAAGCTGTCTCTACTTAGGGTTTATGACAGAGATGCTGTaGGCCCTCTCCGTTCTGAAG +
Preference number: 4 (lower is better)
Translates to: VITITQLSTKESCLYLGFMTEML*ALSVLK
Trigger: CTTCAGAACGGAGAGGGCCCACAGCATCTCTGTCAT...AAACCCTAAGTAGAGACAGCTTTCTTTGGTGCTGAGCTGTGTGATTGTGATGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp CTAGCATCCAAATTACTTCCTTATTGTGTTTCCTTGCTCAGTGTCAAACAATCCGTGCCCCAGGCAATCTaGCCCAGCCAGGATACTGCA +
Preference number: 4 (lower is better)
Translates to: LASKLLPYCVSLLSVKQSVPQAI*PSQDTA
Trigger: TGCAGTATCCTGGCTGGGCCAGATTGCCTGGGGCAC...GGATTGTTTGACACTGAGCAAGGAAACACAATAAGGAAGTAATTTGGATGCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp ATGAACTCATCATTGACTGCACCCATGGGACCACTTCCTCCTCATCCTTTTGGGTTTGAGACAATTCCCTaGCTTACAGACCAGGTCCAA +
Preference number: 4 (lower is better)
Translates to: MNSSLTAPMGPLPPHPFGFETIP*LTDQVQ
Trigger: TTGGACCTGGTCTGTAAGCCAGGGAATTGTCTCAAA...CCCAAAAGGATGAGGAGGAAGTGGTCCCATGGGTGCAGTCAATGATGAGTTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp TGTTTCCATGAACTCATCATTGACTGCACCCATGGGACCACTTCCTCCTCATCCTTTGAGACAATTCCCTaGCTTACAGACCAGGTCCAA +
Preference number: 4 (lower is better)
Translates to: CFHELIIDCTHGTTSSSSFETIP*LTDQVQ
Trigger: TTGGACCTGGTCTGTAAGCCAGGGAATTGTCTCAAA...GGATGAGGAGGAAGTGGTCCCATGGGTGCAGTCAATGATGAGTTCATGGAAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp AAGCCATATGCACATCTGCCCCACTTCCCTAAAGCACTGAGTCTGTTTTGGGCAAATTGTGGGCTGAAGTaGGTGGCTCCATCTTTATTG +
Preference number: 4 (lower is better)
Translates to: KPYAHLPHFPKALSLFWANCGLK*VAPSLL
Trigger: CAATAAAGATGGAGCCACCCACTTCAGCCCACAATT...TGCCCAAAACAGACTCAGTGCTTTAGGGAAGTGGGGCAGATGTGCATATGGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp GGGAGGGTCATGTTGTTTTTAATTGCAAATACAGAAGTCAGACAAGAAGCACCACGAGTTGAGCCTACTTaGGGCCAACCTACGCTGGGT +
Preference number: 4 (lower is better)
Translates to: GRVMLFLIANTEVRQEAPRVEPT*GQPTLG
Trigger: ACCCAGCGTAGGTTGGCCCCAAGTAGGCTCAACTCG...TGGTGCTTCTTGTCTGACTTCTGTATTTGCAATTAAAAACAACATGACCCTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp CTTCTTTGTAGTGTCTTATTTACCCTATCAGGCTGGGAAGTCCCTGAAGGGAGAGCACTGAGTCTGTTTTaGGCACCTTGCTTTGGGAAG +
Preference number: 4 (lower is better)
Translates to: LLCSVLFTLSGWEVPEGRALSLF*APCFGK
Trigger: CTTCCCAAAGCAAGGTGCCCAAAACAGACTCAGTGC...TCTCCCTTCAGGGACTTCCCAGCCTGATAGGGTAAATAAGACACTACAAAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp GCTTCCAAAAGAGCCTTGTGCAATGTGAAACTCTTTGGAGAAGTTGCTGAAGAATCTGGAAAGTTCCACTaGGACACTGCCCAGACCTCG +
Preference number: 4 (lower is better)
Translates to: ASKRALCNVKLFGEVAEESGKFH*DTAQTS
Trigger: CGAGGTCTGGGCAGTGTCCCAGTGGAACTTTCCAGA...TTCTTCAGCAACTTCTCCAAAGAGTTTCACATTGCACAAGGCTCTTTTGGAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR TCA 90 bp TGTTTCCATGAACTCATCATTGACTGCACCCATGGGACCACTTCCTCCTCATCCCTTAATGCACGATTTTaGGACAATTCCCTGGCTTAC +
Preference number: 4 (lower is better)
Translates to: CFHELIIDCTHGTTSSSSLNARF*DNSLAY
Trigger: GTAAGCCAGGGAATTGTCTCAAAATCGTGCATTAAG...GGATGAGGAGGAAGTGGTCCCATGGGTGCAGTCAATGATGAGTTCATGGAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR TCA 90 bp GTCATCACAATCACACAGCTCAGCACCAAAGAAAGCTGTCTCTACTTAGGGTTTACGAGGTCAAGAGATTaGGACCATCCTGGCCAACAT +
Preference number: 4 (lower is better)
Translates to: VITITQLSTKESCLYLGFTRSRD*DHPGQH
Trigger: ATGTTGGCCAGGATGGTCTCAATCTCTTGACCTCGT...AAACCCTAAGTAGAGACAGCTTTCTTTGGTGCTGAGCTGTGTGATTGTGATGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR TCA 90 bp TTGGTGGCAGAAATAGGTTTCCAACAGGCTCCAGTTTTGGCAAGACCTGCCTGTCAATCTTGCACTCCATaGTCTACTCTCCAAAGTTTC +
Preference number: 4 (lower is better)
Translates to: LVAEIGFQQAPVLARPACQSCTP*STLQSF
Trigger: GAAACTTTGGAGAGTAGATCATGGAGTGCAAGATTG...ACAGGCAGGTCTTGCCAAAACTGGAGCCTGTTGGAAACCTATTTCTGCCACCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405109.5
CDS-3UTR GCA 90 bp TGTTTCCATGAACTCATCATTGACTGCACCCATGGGACCACTTCCTCCTCATCCTGGCTGGGGTCATACTaGAACAGTTTGTTGCTTAAT +
Preference number: 4 (lower is better)
Translates to: CFHELIIDCTHGTTSSSSWLGSY*NSLLLN
Trigger: ATTAAGCAACAAACTGTTGCAGTATGACCCCAGCCA...GGATGAGGAGGAAGTGGTCCCATGGGTGCAGTCAATGATGAGTTCATGGAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp CTAGCATCCAAATTACTTCCTTATTGTGTTTCCTTGCTCAGTGTCAAACAATCCCCCATCCACTGCCCCTaGATTGGTGGAATTGGTGCG +
Preference number: 4 (lower is better)
Translates to: LASKLLPYCVSLLSVKQSPIHCP*IGGIGA
Trigger: CGCACCAATTCCACCAATGCAGGGGCAGTGGATGGG...GGATTGTTTGACACTGAGCAAGGAAACACAATAAGGAAGTAATTTGGATGCTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp TTTGGGAGTGACTGTCTTCTGATTATGCTCAATTGTGGGCTGAAGTGGGTGGCTCACCTTAGTGCTCATTaGCTTCTTCCACCAAATCTG +
Preference number: 4 (lower is better)
Translates to: FGSDCLLIMLNCGLKWVAHLSAH*LLPPNL
Trigger: CAGATTTGGTGGAAGAAGGCAATGAGCACTAAGGTG...AGCCACCCACTTCAGCCCACAATTGAGCATAATCAGAAGACAGTCACTCCCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp CTAGCATCCAAATTACTTCCTTATTGTGTTTCCTTGCTCAGTGTCAAACAATCCATGCTCCCCACCCAGTaGCCAGCACACACTGCTTCT +
Preference number: 4 (lower is better)
Translates to: LASKLLPYCVSLLSVKQSMLPTQ*PAHTAS
Trigger: AGAAGCAGTGTGTGCTGGGCACTGGGTGGGGAGCAT...GGATTGTTTGACACTGAGCAAGGAAACACAATAAGGAAGTAATTTGGATGCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp GTCATCACAATCACACAGCTCAGCACCAAAGAAAGCTGTCTCTACTTAGGGTTTGAACTCATCATTGACTaGACCCATGGGACCACTTCC +
Preference number: 4 (lower is better)
Translates to: VITITQLSTKESCLYLGFELIID*THGTTS
Trigger: GGAAGTGGTCCCATGGGTGCAGTCAATGATGAGTTC...AAACCCTAAGTAGAGACAGCTTTCTTTGGTGCTGAGCTGTGTGATTGTGATGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp GTCATCACAATCACACAGCTCAGCACCAAAGAAAGCTGTCTCTACTTAGGGTTTAGATGTGCCATGACATaGCAACAAGGCCTCCTTGAG +
Preference number: 4 (lower is better)
Translates to: VITITQLSTKESCLYLGFRCAMT*QQGLLE
Trigger: CTCAAGGAGGCCTTGTTGGCATGTCATGGCACATCT...AAACCCTAAGTAGAGACAGCTTTCTTTGGTGCTGAGCTGTGTGATTGTGATGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp GTCATCACAATCACACAGCTCAGCACCAAAGAAAGCTGTCTCTACTTAGGGTTTAGCCATATGCACATCTaGCCCACTTCCCTAAAGCAC +
Preference number: 4 (lower is better)
Translates to: VITITQLSTKESCLYLGFSHMHI*PTSLKH
Trigger: GTGCTTTAGGGAAGTGGGGCAGATGTGCATATGGCT...AAACCCTAAGTAGAGACAGCTTTCTTTGGTGCTGAGCTGTGTGATTGTGATGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp TTTGGGAGTGACTGTCTTCTGATTATGCTCAATTGTGGGCTGAAGTGGGTGGCTTATAAGAGCCCATCATaGAGTACTGCAACAGCCTTC +
Preference number: 4 (lower is better)
Translates to: FGSDCLLIMLNCGLKWVAYKSPS*STATAF
Trigger: GAAGGCTGTTGCAGTACTGCATGATGGGCTCTTATA...AGCCACCCACTTCAGCCCACAATTGAGCATAATCAGAAGACAGTCACTCCCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp TTGTCTCCCTCTGAATTTACTGACCACTCCTGCTTCCAAAAGAGCCTTGTGCAAGAAATAAGGGCTAAATaGAGCCAGGACCAGTCTGTG +
Preference number: 4 (lower is better)
Translates to: LSPSEFTDHSCFQKSLVQEIRAK*SQDQSV
Trigger: CACAGACTGGTCCTGGCTGCATTTAGCCCTTATTTC...TTGCACAAGGCTCTTTTGGAAGCAGGAGTGGTCAGTAAATTCAGAGGGAGACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405109.5
ENST00000405256.5
CDS-3UTR GCA 90 bp AAGCCATATGCACATCTGCCCCACTTCCCTAAAGCACTGAGTCTGTTTTGGGCAGAGTTTAGAGGCACTTaGTTCTCCAGCCACAATTAT +
Preference number: 4 (lower is better)
Translates to: KPYAHLPHFPKALSLFWAEFRGT*FSSHNY
Trigger: ATAATTGTGGCTGGAGAAGCAAGTGCCTCTAAACTC...TGCCCAAAACAGACTCAGTGCTTTAGGGAAGTGGGGCAGATGTGCATATGGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405109.5
ENST00000405256.5
CDS-3UTR GCA 90 bp TGTTTCCATGAACTCATCATTGACTGCACCCATGGGACCACTTCCTCCTCATCCGAGTTTAGAGGCACTTaGTTCTCCAGCCACAATTAT +
Preference number: 4 (lower is better)
Translates to: CFHELIIDCTHGTTSSSSEFRGT*FSSHNY
Trigger: ATAATTGTGGCTGGAGAAGCAAGTGCCTCTAAACTC...GGATGAGGAGGAAGTGGTCCCATGGGTGCAGTCAATGATGAGTTCATGGAAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405109.5
ENST00000405256.5
CDS-3UTR CCA 90 bp TTTGGGAGTGACTGTCTTCTGATTATGCTCAATTGTGGGCTGAAGTGGGTGGCTAGATACCTAAACAGTTaGAGGCATCCATGTGGTCCA +
Preference number: 4 (lower is better)
Translates to: FGSDCLLIMLNCGLKWVARYLNS*RHPCGP
Trigger: TGGACCACATGGATGCCTCCAACTGTTTAGGTATCT...AGCCACCCACTTCAGCCCACAATTGAGCATAATCAGAAGACAGTCACTCCCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
CDS-3UTR CCA 90 bp GTACTGCAACAGCCTTCTATTAAAGTGAAAACAGGAGTGATAGGAATATATTTCGGAGGGGACTTGGCATaGGAGGGCCCTCTCGCCAAA +
Preference number: 4 (lower is better)
Translates to: VLQQPSIKVKTGVIGIYFGGDLA*EGPLAK
Trigger: TTTGGCGAGAGGGCCCTCCCATGCCAAGTCCCCTCC...GAAATATATTCCTATCACTCCTGTTTTCACTTTAATAGAAGGCTGTTGCAGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp AGAAAGCTGTCTCTACTTAGGGTTTGTCTCCCTCTGAATTTACTGACCACTCCTTGCAGTGCACATGACTaGCATGACAGAGATGCTGTG +
Preference number: 4 (lower is better)
Translates to: RKLSLLRVCLPLNLLTTPCSAHD*HDRDAV
Trigger: CACAGCATCTCTGTCATGCCAGTCATGTGCACTGCA...AGGAGTGGTCAGTAAATTCAGAGGGAGACAAACCCTAAGTAGAGACAGCTTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp AGAAAGCTGTCTCTACTTAGGGTTTGTCTCCCTCTGAATTTACTGACCACTCCTAAAAGGTCTGCTCCTTaGCAGTGCTGTTCATGGGTC +
Preference number: 4 (lower is better)
Translates to: RKLSLLRVCLPLNLLTTPKRSAP*QCCSWV
Trigger: GACCCATGAACAGCACTGCCAAGGAGCAGACCTTTT...AGGAGTGGTCAGTAAATTCAGAGGGAGACAAACCCTAAGTAGAGACAGCTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp ATGAACTCATCATTGACTGCACCCATGGGACCACTTCCTCCTCATCCTTTTGGGCATTCTTTCAGGCGTTaGTCATCTAGCTACAACCTA +
Preference number: 4 (lower is better)
Translates to: MNSSLTAPMGPLPPHPFGHSFRR*SSSYNL
Trigger: TAGGTTGTAGCTAGATGACCAACGCCTGAAAGAATG...CCCAAAAGGATGAGGAGGAAGTGGTCCCATGGGTGCAGTCAATGATGAGTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp CATCTGAAATCTGTGAAGCACCGGTTTCGACCTCGGGGATTCCTCAGAAGAAGTCATTCTTTCAGGCGTTaGTCATCTAGCTACAACCTA +
Preference number: 4 (lower is better)
Translates to: HLKSVKHRFRPRGFLRRSHSFRR*SSSYNL
Trigger: TAGGTTGTAGCTAGATGACCAACGCCTGAAAGAATG...ACTTCTTCTGAGGAATCCCCGAGGTCGAAACCGGTGCTTCACAGATTTCAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp GCTTCCAAAAGAGCCTTGTGCAATGTGAAACTCTTTGGAGAAGTTGCTGAAGAATTGGCCACTGTGGTCTaGCTTGAGTGCCTTGGTTGT +
Preference number: 4 (lower is better)
Translates to: ASKRALCNVKLFGEVAEELATVV*LECLGC
Trigger: ACAACCAAGGCACTCAAGCCAGACCACAGTGGCCAA...TTCTTCAGCAACTTCTCCAAAGAGTTTCACATTGCACAAGGCTCTTTTGGAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp GGGAGGGTCATGTTGTTTTTAATTGCAAATACAGAAGTCAGACAAGAAGCACCATTTAACTCAGATTCCTaGACGTGCTCGGGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: GRVMLFLIANTEVRQEAPFNSDS*TCSGPR
Trigger: CCTGGGCCCCGAGCACGTCCAGGAATCTGAGTTAAA...TGGTGCTTCTTGTCTGACTTCTGTATTTGCAATTAAAAACAACATGACCCTCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp CATCTGAAATCTGTGAAGCACCGGTTTCGACCTCGGGGATTCCTCAGAAGAAGTATCATGATCATCCACTaGGGAAAGAGTAAGCTCACT +
Preference number: 4 (lower is better)
Translates to: HLKSVKHRFRPRGFLRRSIMIIH*GKSKLT
Trigger: AGTGAGCTTACTCTTTCCCCAGTGGATGATCATGAT...ACTTCTTCTGAGGAATCCCCGAGGTCGAAACCGGTGCTTCACAGATTTCAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp ATGAACTCATCATTGACTGCACCCATGGGACCACTTCCTCCTCATCCTTTTGGGATCATGATCATCCACTaGGGAAAGAGTAAGCTCACT +
Preference number: 4 (lower is better)
Translates to: MNSSLTAPMGPLPPHPFGIMIIH*GKSKLT
Trigger: AGTGAGCTTACTCTTTCCCCAGTGGATGATCATGAT...CCCAAAAGGATGAGGAGGAAGTGGTCCCATGGGTGCAGTCAATGATGAGTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp AAGCCATATGCACATCTGCCCCACTTCCCTAAAGCACTGAGTCTGTTTTGGGCAATCATGATCATCCACTaGGGAAAGAGTAAGCTCACT +
Preference number: 4 (lower is better)
Translates to: KPYAHLPHFPKALSLFWAIMIIH*GKSKLT
Trigger: AGTGAGCTTACTCTTTCCCCAGTGGATGATCATGAT...TGCCCAAAACAGACTCAGTGCTTTAGGGAAGTGGGGCAGATGTGCATATGGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp GTCATCACAATCACACAGCTCAGCACCAAAGAAAGCTGTCTCTACTTAGGGTTTGCACTGAGTCTGTTTTaGGCACCTTGCTTTGGGAAG +
Preference number: 4 (lower is better)
Translates to: VITITQLSTKESCLYLGFALSLF*APCFGK
Trigger: CTTCCCAAAGCAAGGTGCCCAAAACAGACTCAGTGC...AAACCCTAAGTAGAGACAGCTTTCTTTGGTGCTGAGCTGTGTGATTGTGATGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp GTCATCACAATCACACAGCTCAGCACCAAAGAAAGCTGTCTCTACTTAGGGTTTATTTCTAACGATATCTaGCTGCAGGTGGGGAGGGTC +
Preference number: 4 (lower is better)
Translates to: VITITQLSTKESCLYLGFISNDI*LQVGRV
Trigger: GACCCTCCCCACCTGCAGCCAGATATCGTTAGAAAT...AAACCCTAAGTAGAGACAGCTTTCTTTGGTGCTGAGCTGTGTGATTGTGATGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp CTAGCATCCAAATTACTTCCTTATTGTGTTTCCTTGCTCAGTGTCAAACAATCCCACCTATTCCCGCGCTaGTTCCAGACGGCGACTACA +
Preference number: 4 (lower is better)
Translates to: LASKLLPYCVSLLSVKQSHLFPR*FQTATT
Trigger: TGTAGTCGCCGTCTGGAACCAGCGCGGGAATAGGTG...GGATTGTTTGACACTGAGCAAGGAAACACAATAAGGAAGTAATTTGGATGCTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405109.5
CDS-3UTR CCA 90 bp TTTGGGAGTGACTGTCTTCTGATTATGCTCAATTGTGGGCTGAAGTGGGTGGCTAATATGGGCCTGTGCTaGCTGGGCGATATAAATAGA +
Preference number: 4 (lower is better)
Translates to: FGSDCLLIMLNCGLKWVANMGLC*LGDINR
Trigger: TCTATTTATATCGCCCAGCCAGCACAGGCCCATATT...AGCCACCCACTTCAGCCCACAATTGAGCATAATCAGAAGACAGTCACTCCCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405109.5
CDS-3UTR TCA 90 bp CTTCTTTGTAGTGTCTTATTTACCCTATCAGGCTGGGAAGTCCCTGAAGGGAGAAGTAGAAGGGGATTCTaGAGGAGAATGGTCAGTGTT +
Preference number: 4 (lower is better)
Translates to: LLCSVLFTLSGWEVPEGRSRRGF*RRMVSV
Trigger: AACACTGACCATTCTCCTTCAGAATCCCCTTCTACT...TCTCCCTTCAGGGACTTCCCAGCCTGATAGGGTAAATAAGACACTACAAAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR TCA 90 bp GTCATCACAATCACACAGCTCAGCACCAAAGAAAGCTGTCTCTACTTAGGGTTTGGAGTGACTGTCTTCTaGTTATGCTCAATTGTGGGC +
Preference number: 4 (lower is better)
Translates to: VITITQLSTKESCLYLGFGVTVF*LCSIVG
Trigger: GCCCACAATTGAGCATAATCAGAAGACAGTCACTCC...AAACCCTAAGTAGAGACAGCTTTCTTTGGTGCTGAGCTGTGTGATTGTGATGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR TCA 90 bp TTGTCTCCCTCTGAATTTACTGACCACTCCTGCTTCCAAAAGAGCCTTGTGCAAAGAATGCACAGATCATaGTCATCCACTGGGGAAAGA +
Preference number: 4 (lower is better)
Translates to: LSPSEFTDHSCFQKSLVQRMHRS*SSTGER
Trigger: TCTTTCCCCAGTGGATGATCATGATCTGTGCATTCT...TTGCACAAGGCTCTTTTGGAAGCAGGAGTGGTCAGTAAATTCAGAGGGAGACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR TCA 90 bp GCTTCCAAAAGAGCCTTGTGCAATGTGAAACTCTTTGGAGAAGTTGCTGAAGAAGGTGGAGTGACTATGTaGAGAGGAATGGAGGGAAGT +
Preference number: 4 (lower is better)
Translates to: ASKRALCNVKLFGEVAEEGGVTM*RGMEGS
Trigger: ACTTCCCTCCATTCCTCTTCACATAGTCACTCCACC...TTCTTCAGCAACTTCTCCAAAGAGTTTCACATTGCACAAGGCTCTTTTGGAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR TCA 90 bp CTTCTTTGTAGTGTCTTATTTACCCTATCAGGCTGGGAAGTCCCTGAAGGGAGATCCTCAGAAGAAGTTTaGGAAATCCTGCCCTTGATG +
Preference number: 4 (lower is better)
Translates to: LLCSVLFTLSGWEVPEGRSSEEV*EILPLM
Trigger: CATCAAGGGCAGGATTTCTCAAACTTCTTCTGAGGA...TCTCCCTTCAGGGACTTCCCAGCCTGATAGGGTAAATAAGACACTACAAAGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR TCA 90 bp ATGAACTCATCATTGACTGCACCCATGGGACCACTTCCTCCTCATCCTTTTGGGAACATTTGCTCATTATaGAGTCAGGGAGAACAATGC +
Preference number: 4 (lower is better)
Translates to: MNSSLTAPMGPLPPHPFGNICSL*SQGEQC
Trigger: GCATTGTTCTCCCTGACTTCATAATGAGCAAATGTT...CCCAAAAGGATGAGGAGGAAGTGGTCCCATGGGTGCAGTCAATGATGAGTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp GCTTCCAAAAGAGCCTTGTGCAATGTGAAACTCTTTGGAGAAGTTGCTGAAGAAGAGTTTCCCATCCACTaGCCCTGCATTGGTGGAATT +
Preference number: 4 (lower is better)
Translates to: ASKRALCNVKLFGEVAEEEFPIH*PCIGGI
Trigger: AATTCCACCAATGCAGGGGCAGTGGATGGGAAACTC...TTCTTCAGCAACTTCTCCAAAGAGTTTCACATTGCACAAGGCTCTTTTGGAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp CTTCTTTGTAGTGTCTTATTTACCCTATCAGGCTGGGAAGTCCCTGAAGGGAGACACCTTAGTGCTCATTaGCTTCTTCCACCAAATCTG +
Preference number: 4 (lower is better)
Translates to: LLCSVLFTLSGWEVPEGRHLSAH*LLPPNL
Trigger: CAGATTTGGTGGAAGAAGGCAATGAGCACTAAGGTG...TCTCCCTTCAGGGACTTCCCAGCCTGATAGGGTAAATAAGACACTACAAAGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp GCTTCCAAAAGAGCCTTGTGCAATGTGAAACTCTTTGGAGAAGTTGCTGAAGAAGAACTCATCATTGACTaGACCCATGGGACCACTTCC +
Preference number: 4 (lower is better)
Translates to: ASKRALCNVKLFGEVAEEELIID*THGTTS
Trigger: GGAAGTGGTCCCATGGGTGCAGTCAATGATGAGTTC...TTCTTCAGCAACTTCTCCAAAGAGTTTCACATTGCACAAGGCTCTTTTGGAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp GGGAGGGTCATGTTGTTTTTAATTGCAAATACAGAAGTCAGACAAGAAGCACCACTGTCTCTGGGCCCTTaGTTGGCTGTTTCCATGAAC +
Preference number: 4 (lower is better)
Translates to: GRVMLFLIANTEVRQEAPLSLGP*LAVSMN
Trigger: GTTCATGGAAACAGCCAAGCAAGGGCCCAGAGACAG...TGGTGCTTCTTGTCTGACTTCTGTATTTGCAATTAAAAACAACATGACCCTCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp CTAGCATCCAAATTACTTCCTTATTGTGTTTCCTTGCTCAGTGTCAAACAATCCGCTGCTGGGTGGCGTTaGTTCAGTAGAAGGGGATTC +
Preference number: 4 (lower is better)
Translates to: LASKLLPYCVSLLSVKQSAAGWR*FSRRGF
Trigger: GAATCCCCTTCTACTGAAGCAACGCCACCCAGCAGC...GGATTGTTTGACACTGAGCAAGGAAACACAATAAGGAAGTAATTTGGATGCTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp TTGTCTCCCTCTGAATTTACTGACCACTCCTGCTTCCAAAAGAGCCTTGTGCAATTTACTGACCACTCCTaGTTCCAAAAGAGCCTTGTG +
Preference number: 4 (lower is better)
Translates to: LSPSEFTDHSCFQKSLVQFTDHS*FQKSLV
Trigger: CACAAGGCTCTTTTGGAAGCAGGAGTGGTCAGTAAA...TTGCACAAGGCTCTTTTGGAAGCAGGAGTGGTCAGTAAATTCAGAGGGAGACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp GTACTGCAACAGCCTTCTATTAAAGTGAAAACAGGAGTGATAGGAATATATTTCATCGTGCCACTGCACTaGACTCCAGCCTGGCGAGAG +
Preference number: 4 (lower is better)
Translates to: VLQQPSIKVKTGVIGIYFIVPLH*TPAWRE
Trigger: CTCTCGCCAGGCTGGAGTGCAGTGCAGTGGCACGAT...GAAATATATTCCTATCACTCCTGTTTTCACTTTAATAGAAGGCTGTTGCAGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp GGGAGGGTCATGTTGTTTTTAATTGCAAATACAGAAGTCAGACAAGAAGCACCATTTACCCACTTATCTTaGCTCCCACAGGCGGGCGAT +
Preference number: 4 (lower is better)
Translates to: GRVMLFLIANTEVRQEAPFTHLS*LPQAGD
Trigger: ATCGCCCGCCTGTGGGAGGCAAGATAAGTGGGTAAA...TGGTGCTTCTTGTCTGACTTCTGTATTTGCAATTAAAAACAACATGACCCTCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp GTACTGCAACAGCCTTCTATTAAAGTGAAAACAGGAGTGATAGGAATATATTTCCTCCAGCAGAGGTCATaGCCCTTCTCGGTCCTCCCT +
Preference number: 4 (lower is better)
Translates to: VLQQPSIKVKTGVIGIYFLQQRS*PFSVLP
Trigger: AGGGAGGACCGAGAAGGGGCATGACCTCTGCTGGAG...GAAATATATTCCTATCACTCCTGTTTTCACTTTAATAGAAGGCTGTTGCAGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp CTAGCATCCAAATTACTTCCTTATTGTGTTTCCTTGCTCAGTGTCAAACAATCCCTGCCCCTGCATTGGTaGAATTGGTGCGGAGTGAGA +
Preference number: 4 (lower is better)
Translates to: LASKLLPYCVSLLSVKQSLPLHW*NWCGVR
Trigger: TCTCACTCCGCACCAATTCCACCAATGCAGGGGCAG...GGATTGTTTGACACTGAGCAAGGAAACACAATAAGGAAGTAATTTGGATGCTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp CTTCTTTGTAGTGTCTTATTTACCCTATCAGGCTGGGAAGTCCCTGAAGGGAGATTGGAGATAACCTCATaGCGATCTGCTCCATGGAAT +
Preference number: 4 (lower is better)
Translates to: LLCSVLFTLSGWEVPEGRLEITS*RSAPWN
Trigger: ATTCCATGGAGCAGATCGCCATGAGGTTATCTCCAA...TCTCCCTTCAGGGACTTCCCAGCCTGATAGGGTAAATAAGACACTACAAAGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp CTTCTTTGTAGTGTCTTATTTACCCTATCAGGCTGGGAAGTCCCTGAAGGGAGACCACTGGTTTTCCCATaGGTCCAGTTCCAATATTTC +
Preference number: 4 (lower is better)
Translates to: LLCSVLFTLSGWEVPEGRPLVFP*VQFQYF
Trigger: GAAATATTGGAACTGGACCCATGGGAAAACCAGTGG...TCTCCCTTCAGGGACTTCCCAGCCTGATAGGGTAAATAAGACACTACAAAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp GCTTCCAAAAGAGCCTTGTGCAATGTGAAACTCTTTGGAGAAGTTGCTGAAGAATGCAGTGCACATGACTaGCATGACAGAGATGCTGTG +
Preference number: 4 (lower is better)
Translates to: ASKRALCNVKLFGEVAEECSAHD*HDRDAV
Trigger: CACAGCATCTCTGTCATGCCAGTCATGTGCACTGCA...TTCTTCAGCAACTTCTCCAAAGAGTTTCACATTGCACAAGGCTCTTTTGGAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp CTAGCATCCAAATTACTTCCTTATTGTGTTTCCTTGCTCAGTGTCAAACAATCCTGGCAGTGCTGTTCATaGGTCCCCAGCAGAGTGAGA +
Preference number: 4 (lower is better)
Translates to: LASKLLPYCVSLLSVKQSWQCCS*VPSRVR
Trigger: TCTCACTCTGCTGGGGACCCATGAACAGCACTGCCA...GGATTGTTTGACACTGAGCAAGGAAACACAATAAGGAAGTAATTTGGATGCTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp CTTCTTTGTAGTGTCTTATTTACCCTATCAGGCTGGGAAGTCCCTGAAGGGAGATCCTCCTCATCCTTTTaGGGACCCAATAAAAGGTCT +
Preference number: 4 (lower is better)
Translates to: LLCSVLFTLSGWEVPEGRSSSSF*GPNKRS
Trigger: AGACCTTTTATTGGGTCCCCAAAAGGATGAGGAGGA...TCTCCCTTCAGGGACTTCCCAGCCTGATAGGGTAAATAAGACACTACAAAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp GTACTGCAACAGCCTTCTATTAAAGTGAAAACAGGAGTGATAGGAATATATTTCAGCCTTCTCTGTCCCTaGCTTGGGTGGCTTGGGCGA +
Preference number: 4 (lower is better)
Translates to: VLQQPSIKVKTGVIGIYFSLLCP*LGWLGR
Trigger: TCGCCCAAGCCACCCAAGCCAGGGACAGAGAAGGCT...GAAATATATTCCTATCACTCCTGTTTTCACTTTAATAGAAGGCTGTTGCAGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp GTACTGCAACAGCCTTCTATTAAAGTGAAAACAGGAGTGATAGGAATATATTTCCTACGCTGGGTCTCCTaGTCCCTCTCCTTGGTGGCA +
Preference number: 4 (lower is better)
Translates to: VLQQPSIKVKTGVIGIYFLRWVS*SLSLVA
Trigger: TGCCACCAAGGAGAGGGACCAGGAGACCCAGCGTAG...GAAATATATTCCTATCACTCCTGTTTTCACTTTAATAGAAGGCTGTTGCAGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp GCTTCCAAAAGAGCCTTGTGCAATGTGAAACTCTTTGGAGAAGTTGCTGAAGAATTGGGCACCTTGCTTTaGGAAGTGCTGACTGCAATG +
Preference number: 4 (lower is better)
Translates to: ASKRALCNVKLFGEVAEELGTLL*EVLTAM
Trigger: CATTGCAGTCAGCACTTCCCAAAGCAAGGTGCCCAA...TTCTTCAGCAACTTCTCCAAAGAGTTTCACATTGCACAAGGCTCTTTTGGAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR TCA 90 bp CTAGCATCCAAATTACTTCCTTATTGTGTTTCCTTGCTCAGTGTCAAACAATCCATGGTTGTATGTGTCTaGGAGGTGGGCAAAGGCAGC +
Preference number: 4 (lower is better)
Translates to: LASKLLPYCVSLLSVKQSMVVCV*EVGKGS
Trigger: GCTGCCTTTGCCCACCTCTCAGACACATACAACCAT...GGATTGTTTGACACTGAGCAAGGAAACACAATAAGGAAGTAATTTGGATGCTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR TCA 90 bp GTCATCACAATCACACAGCTCAGCACCAAAGAAAGCTGTCTCTACTTAGGGTTTGAGCCTTGTGCAATGTaGAACTCTTTGGAGAAGTTG +
Preference number: 4 (lower is better)
Translates to: VITITQLSTKESCLYLGFEPCAM*NSLEKL
Trigger: CAACTTCTCCAAAGAGTTTCACATTGCACAAGGCTC...AAACCCTAAGTAGAGACAGCTTTCTTTGGTGCTGAGCTGTGTGATTGTGATGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR TCA 90 bp CTAGCATCCAAATTACTTCCTTATTGTGTTTCCTTGCTCAGTGTCAAACAATCCGTGGAGCAGGTGGAGTaGCTATGTGAAGAGGAATGG +
Preference number: 4 (lower is better)
Translates to: LASKLLPYCVSLLSVKQSVEQVE*LCEEEW
Trigger: CCATTCCTCTTCACATAGTCACTCCACCTGCTCCAC...GGATTGTTTGACACTGAGCAAGGAAACACAATAAGGAAGTAATTTGGATGCTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR TCA 90 bp AGAAAGCTGTCTCTACTTAGGGTTTGTCTCCCTCTGAATTTACTGACCACTCCTTCCTCAGAAGAAGTTTaGGAAATCCTGCCCTTGATG +
Preference number: 4 (lower is better)
Translates to: RKLSLLRVCLPLNLLTTPSSEEV*EILPLM
Trigger: CATCAAGGGCAGGATTTCTCAAACTTCTTCTGAGGA...AGGAGTGGTCAGTAAATTCAGAGGGAGACAAACCCTAAGTAGAGACAGCTTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp AAGATCAGACATCTGAAATCTGTGAAGCACCGGTTTCGACCTCGGGGATTCCTCCTCGAAATTCAGCTGTaGATAACTTTTCCCAAAACT +
Preference number: 4 (lower is better)
Translates to: KIRHLKSVKHRFRPRGFLLEIQL*ITFPKT
Trigger: AGTTTTGGGAAAAGTTATGCACAGCTGAATTTCGAG...GAGGAATCCCCGAGGTCGAAACCGGTGCTTCACAGATTTCAGATGTCTGATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp GTACTGCAACAGCCTTCTATTAAAGTGAAAACAGGAGTGATAGGAATATATTTCGCCAGGTACTGTGAGTaGACTTGGGGCACAAGTGCG +
Preference number: 4 (lower is better)
Translates to: VLQQPSIKVKTGVIGIYFARYCE*TWGTSA
Trigger: CGCACTTGTGCCCCAAGTGCACTCACAGTACCTGGC...GAAATATATTCCTATCACTCCTGTTTTCACTTTAATAGAAGGCTGTTGCAGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp CTAGCATCCAAATTACTTCCTTATTGTGTTTCCTTGCTCAGTGTCAAACAATCCCTAACGATATCTGGCTaGAGGTGGGGAGGGTCATGT +
Preference number: 4 (lower is better)
Translates to: LASKLLPYCVSLLSVKQSLTISG*RWGGSC
Trigger: ACATGACCCTCCCCACCTGCAGCCAGATATCGTTAG...GGATTGTTTGACACTGAGCAAGGAAACACAATAAGGAAGTAATTTGGATGCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp TGTTTCCATGAACTCATCATTGACTGCACCCATGGGACCACTTCCTCCTCATCCAGTTCCAATCTGACTTaGTTCAAAAGCTCAACAAGA +
Preference number: 4 (lower is better)
Translates to: CFHELIIDCTHGTTSSSSSSNLT*FKSSTR
Trigger: TCTTGTTGAGCTTTTGAAGCAAGTCAGATTGGAACT...GGATGAGGAGGAAGTGGTCCCATGGGTGCAGTCAATGATGAGTTCATGGAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405109.5
ENST00000405256.5
CDS-3UTR GCA 90 bp GGGAGGGTCATGTTGTTTTTAATTGCAAATACAGAAGTCAGACAAGAAGCACCACACTACAGCATGACATaGCAATTGCAGTGGAAGGGG +
Preference number: 4 (lower is better)
Translates to: GRVMLFLIANTEVRQEAPHYSMT*QLQWKG
Trigger: CCCCTTCCACTGCAATTGGCATGTCATGCTGTAGTG...TGGTGCTTCTTGTCTGACTTCTGTATTTGCAATTAAAAACAACATGACCCTCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp GTCATCACAATCACACAGCTCAGCACCAAAGAAAGCTGTCTCTACTTAGGGTTTTCCATTGATCTTGGCTaGGGTCATACTGCAACAGTT +
Preference number: 4 (lower is better)
Translates to: VITITQLSTKESCLYLGFSIDLG*GHTATV
Trigger: AACTGTTGCAGTATGACCCCAGCCAAGATCAATGGA...AAACCCTAAGTAGAGACAGCTTTCTTTGGTGCTGAGCTGTGTGATTGTGATGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp GGGAGGGTCATGTTGTTTTTAATTGCAAATACAGAAGTCAGACAAGAAGCACCACCAAAAGTCCCCATCTaGGTTGTAGATCTCCACCAC +
Preference number: 4 (lower is better)
Translates to: GRVMLFLIANTEVRQEAPPKVPI*VVDLHH
Trigger: GTGGTGGAGATCTACAACCCAGATGGGGACTTTTGG...TGGTGCTTCTTGTCTGACTTCTGTATTTGCAATTAAAAACAACATGACCCTCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp GGGAGGGTCATGTTGTTTTTAATTGCAAATACAGAAGTCAGACAAGAAGCACCATTTACCCTATCAGGCTaGGAAGTCCCTGAAGGGAGA +
Preference number: 4 (lower is better)
Translates to: GRVMLFLIANTEVRQEAPFTLSG*EVPEGR
Trigger: TCTCCCTTCAGGGACTTCCCAGCCTGATAGGGTAAA...TGGTGCTTCTTGTCTGACTTCTGTATTTGCAATTAAAAACAACATGACCCTCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp TTGGTGGCAGAAATAGGTTTCCAACAGGCTCCAGTTTTGGCAAGACCTGCCTGTGATTCTGAAGGAGAATaGTCAGTGTTTATAAGACTG +
Preference number: 4 (lower is better)
Translates to: LVAEIGFQQAPVLARPACDSEGE*SVFIRL
Trigger: CAGTCTTATAAACACTGACCATTCTCCTTCAGAATC...ACAGGCAGGTCTTGCCAAAACTGGAGCCTGTTGGAAACCTATTTCTGCCACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp GTACTGCAACAGCCTTCTATTAAAGTGAAAACAGGAGTGATAGGAATATATTTCAGCCCTGCTGCTGGGTaGCGTTGCTTCAGTAGAAGG +
Preference number: 4 (lower is better)
Translates to: VLQQPSIKVKTGVIGIYFSPAAG*RCFSRR
Trigger: CCTTCTACTGAAGCAACGCCACCCAGCAGCAGGGCT...GAAATATATTCCTATCACTCCTGTTTTCACTTTAATAGAAGGCTGTTGCAGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp CTAGCATCCAAATTACTTCCTTATTGTGTTTCCTTGCTCAGTGTCAAACAATCCTTGGCCACTGTGGTCTaGCTTGAGTGCCTTGGTTGT +
Preference number: 4 (lower is better)
Translates to: LASKLLPYCVSLLSVKQSLATVV*LECLGC
Trigger: ACAACCAAGGCACTCAAGCCAGACCACAGTGGCCAA...GGATTGTTTGACACTGAGCAAGGAAACACAATAAGGAAGTAATTTGGATGCTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp GGGAGGGTCATGTTGTTTTTAATTGCAAATACAGAAGTCAGACAAGAAGCACCAGGACTACCCTGCAGATaGTTGTATGTGTCTGAGAGG +
Preference number: 4 (lower is better)
Translates to: GRVMLFLIANTEVRQEAPGLPCR*LYVSER
Trigger: CCTCTCAGACACATACAACCATCTGCAGGGTAGTCC...TGGTGCTTCTTGTCTGACTTCTGTATTTGCAATTAAAAACAACATGACCCTCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR CAA 72 bp GGCTTCTGCCAGCCTAGCATCCAAATTACTTCCTTATaGTGTTTCCTTGCTCAGTGTCAAACAATCCTGTCA +
Preference number: 4 (lower is better)
Translates to: GFCQPSIQITSL*CFLAQCQTILS
Trigger: TGACAGGATTGTTTGACACTGAGCAAGGAAACACAATAAGGAAGTAATTTGGATGCTAGGCTGGCAGAAGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR TCA 90 bp GTACTGCAACAGCCTTCTATTAAAGTGAAAACAGGAGTGATAGGAATATATTTCCTACTTTTCCAGCCTTaGCCACAAACCCTGTGCCCC +
Preference number: 4 (lower is better)
Translates to: VLQQPSIKVKTGVIGIYFLLFQP*PQTLCP
Trigger: GGGGCACAGGGTTTGTGGTCAAGGCTGGAAAAGTAG...GAAATATATTCCTATCACTCCTGTTTTCACTTTAATAGAAGGCTGTTGCAGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR TCA 90 bp AGAAAGCTGTCTCTACTTAGGGTTTGTCTCCCTCTGAATTTACTGACCACTCCTCTTAATGCACGATTTTaGGACAATTCCCTGGCTTAC +
Preference number: 4 (lower is better)
Translates to: RKLSLLRVCLPLNLLTTPLNARF*DNSLAY
Trigger: GTAAGCCAGGGAATTGTCTCAAAATCGTGCATTAAG...AGGAGTGGTCAGTAAATTCAGAGGGAGACAAACCCTAAGTAGAGACAGCTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR TCA 90 bp GCTTCCAAAAGAGCCTTGTGCAATGTGAAACTCTTTGGAGAAGTTGCTGAAGAAAGAATGCACAGATCATaGTCATCCACTGGGGAAAGA +
Preference number: 4 (lower is better)
Translates to: ASKRALCNVKLFGEVAEERMHRS*SSTGER
Trigger: TCTTTCCCCAGTGGATGATCATGATCTGTGCATTCT...TTCTTCAGCAACTTCTCCAAAGAGTTTCACATTGCACAAGGCTCTTTTGGAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR TCA 90 bp CTAGCATCCAAATTACTTCCTTATTGTGTTTCCTTGCTCAGTGTCAAACAATCCGGTGGAGTGACTATGTaGAGAGGAATGGAGGGAAGT +
Preference number: 4 (lower is better)
Translates to: LASKLLPYCVSLLSVKQSGGVTM*RGMEGS
Trigger: ACTTCCCTCCATTCCTCTTCACATAGTCACTCCACC...GGATTGTTTGACACTGAGCAAGGAAACACAATAAGGAAGTAATTTGGATGCTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR TCA 90 bp TTTGGGAGTGACTGTCTTCTGATTATGCTCAATTGTGGGCTGAAGTGGGTGGCTAGTATGACTTCCCTTTaGTTACATTCAAGTAGTCCA +
Preference number: 4 (lower is better)
Translates to: FGSDCLLIMLNCGLKWVASMTSL*LHSSSP
Trigger: TGGACTACTTGAATGTAATCAAAGGGAAGTCATACT...AGCCACCCACTTCAGCCCACAATTGAGCATAATCAGAAGACAGTCACTCCCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405109.5
ENST00000405256.5
CDS-3UTR GCA 90 bp GGGAGGGTCATGTTGTTTTTAATTGCAAATACAGAAGTCAGACAAGAAGCACCAATCCGAGTAAACCCTTaGTTAACTCTCAGCCGCCAA +
Preference number: 4 (lower is better)
Translates to: GRVMLFLIANTEVRQEAPIRVNP*LTLSRQ
Trigger: TTGGCGGCTGAGAGTTAAGCAAGGGTTTACTCGGAT...TGGTGCTTCTTGTCTGACTTCTGTATTTGCAATTAAAAACAACATGACCCTCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp GCTTCCAAAAGAGCCTTGTGCAATGTGAAACTCTTTGGAGAAGTTGCTGAAGAAAGATACCTAAACAGTTaGAGGCATCCATGTGGTCCA +
Preference number: 4 (lower is better)
Translates to: ASKRALCNVKLFGEVAEERYLNS*RHPCGP
Trigger: TGGACCACATGGATGCCTCCAACTGTTTAGGTATCT...TTCTTCAGCAACTTCTCCAAAGAGTTTCACATTGCACAAGGCTCTTTTGGAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
CDS-3UTR CCA 90 bp CTAGCATCCAAATTACTTCCTTATTGTGTTTCCTTGCTCAGTGTCAAACAATCCTTTACCCTATCAGGCTaGGAAGTCCCTGAAGGGAGA +
Preference number: 4 (lower is better)
Translates to: LASKLLPYCVSLLSVKQSFTLSG*EVPEGR
Trigger: TCTCCCTTCAGGGACTTCCCAGCCTGATAGGGTAAA...GGATTGTTTGACACTGAGCAAGGAAACACAATAAGGAAGTAATTTGGATGCTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp CTAGCATCCAAATTACTTCCTTATTGTGTTTCCTTGCTCAGTGTCAAACAATCCGATTATGCTCAATTGTaGGCTGAAGTGGGTGGCTCC +
Preference number: 4 (lower is better)
Translates to: LASKLLPYCVSLLSVKQSDYAQL*AEVGGS
Trigger: GGAGCCACCCACTTCAGCCCACAATTGAGCATAATC...GGATTGTTTGACACTGAGCAAGGAAACACAATAAGGAAGTAATTTGGATGCTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp GCTTCCAAAAGAGCCTTGTGCAATGTGAAACTCTTTGGAGAAGTTGCTGAAGAATTTAGAGAGTGCTGTTaGGGTGTCTTGATGGCTTTG +
Preference number: 4 (lower is better)
Translates to: ASKRALCNVKLFGEVAEEFRECC*GVLMAL
Trigger: CAAAGCCATCAAGACACCCCAACAGCACTCTCTAAA...TTCTTCAGCAACTTCTCCAAAGAGTTTCACATTGCACAAGGCTCTTTTGGAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405109.5
ENST00000405256.5
CDS-3UTR CCA 90 bp TTGTCTCCCTCTGAATTTACTGACCACTCCTGCTTCCAAAAGAGCCTTGTGCAAGATCATAACAAAAACTaGCATCCCCATAGCTCCTAT +
Preference number: 4 (lower is better)
Translates to: LSPSEFTDHSCFQKSLVQDHNKN*HPHSSY
Trigger: ATAGGAGCTATGGGGATGCCAGTTTTTGTTATGATC...TTGCACAAGGCTCTTTTGGAAGCAGGAGTGGTCAGTAAATTCAGAGGGAGACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000405109.5
ENST00000405256.5
3UTR CAA 72 bp CTGAATTTACTGACCACTCCTGCTTCCAAAAGAGCCTaGTGCAATGTGAAACTCTTTGGAGAAGTTGCTGAA +
Preference number: 4 (lower is better)
Translates to: LNLLTTPASKRA*CNVKLFGEVAE
Trigger: TTCAGCAACTTCTCCAAAGAGTTTCACATTGCACAAGGCTCTTTTGGAAGCAGGAGTGGTCAGTAAATTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR TCA 90 bp GCTTCCAAAAGAGCCTTGTGCAATGTGAAACTCTTTGGAGAAGTTGCTGAAGAACTTAATGCACGATTTTaGGACAATTCCCTGGCTTAC +
Preference number: 4 (lower is better)
Translates to: ASKRALCNVKLFGEVAEELNARF*DNSLAY
Trigger: GTAAGCCAGGGAATTGTCTCAAAATCGTGCATTAAG...TTCTTCAGCAACTTCTCCAAAGAGTTTCACATTGCACAAGGCTCTTTTGGAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR TCA 90 bp GTACTGCAACAGCCTTCTATTAAAGTGAAAACAGGAGTGATAGGAATATATTTCATGGTTGTATGTGTCTaGGAGGTGGGCAAAGGCAGC +
Preference number: 4 (lower is better)
Translates to: VLQQPSIKVKTGVIGIYFMVVCV*EVGKGS
Trigger: GCTGCCTTTGCCCACCTCTCAGACACATACAACCAT...GAAATATATTCCTATCACTCCTGTTTTCACTTTAATAGAAGGCTGTTGCAGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR TCA 90 bp GCTTCCAAAAGAGCCTTGTGCAATGTGAAACTCTTTGGAGAAGTTGCTGAAGAATCTCTCCTTCTGCTGTaGGTACCACATCAATCATTT +
Preference number: 4 (lower is better)
Translates to: ASKRALCNVKLFGEVAEESLLLL*VPHQSF
Trigger: AAATGATTGATGTGGTACTCACAGCAGAAGGAGAGA...TTCTTCAGCAACTTCTCCAAAGAGTTTCACATTGCACAAGGCTCTTTTGGAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405109.5
ENST00000405256.5
CDS-3UTR TCA 90 bp CTTCTTTGTAGTGTCTTATTTACCCTATCAGGCTGGGAAGTCCCTGAAGGGAGAAGTATGACTTCCCTTTaGTTACATTCAAGTAGTCCA +
Preference number: 4 (lower is better)
Translates to: LLCSVLFTLSGWEVPEGRSMTSL*LHSSSP
Trigger: TGGACTACTTGAATGTAATCAAAGGGAAGTCATACT...TCTCCCTTCAGGGACTTCCCAGCCTGATAGGGTAAATAAGACACTACAAAGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405109.5
ENST00000405256.5
CDS-3UTR GCA 90 bp CTTCTTTGTAGTGTCTTATTTACCCTATCAGGCTGGGAAGTCCCTGAAGGGAGACTCGAAATTCAGCTGTaGATAACTTTTCCCAAAACT +
Preference number: 4 (lower is better)
Translates to: LLCSVLFTLSGWEVPEGRLEIQL*ITFPKT
Trigger: AGTTTTGGGAAAAGTTATGCACAGCTGAATTTCGAG...TCTCCCTTCAGGGACTTCCCAGCCTGATAGGGTAAATAAGACACTACAAAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp GCTTCCAAAAGAGCCTTGTGCAATGTGAAACTCTTTGGAGAAGTTGCTGAAGAATGGCTGGGGTCATACTaGAACAGTTTGTTGCTTAAT +
Preference number: 4 (lower is better)
Translates to: ASKRALCNVKLFGEVAEEWLGSY*NSLLLN
Trigger: ATTAAGCAACAAACTGTTGCAGTATGACCCCAGCCA...TTCTTCAGCAACTTCTCCAAAGAGTTTCACATTGCACAAGGCTCTTTTGGAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp GGGAGGGTCATGTTGTTTTTAATTGCAAATACAGAAGTCAGACAAGAAGCACCATTTACTGACCACTCCTaGTTCCAAAAGAGCCTTGTG +
Preference number: 4 (lower is better)
Translates to: GRVMLFLIANTEVRQEAPFTDHS*FQKSLV
Trigger: CACAAGGCTCTTTTGGAAGCAGGAGTGGTCAGTAAA...TGGTGCTTCTTGTCTGACTTCTGTATTTGCAATTAAAAACAACATGACCCTCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp GCTTCCAAAAGAGCCTTGTGCAATGTGAAACTCTTTGGAGAAGTTGCTGAAGAAGGTCATTATGAATACTaGCCAGAGCATAGAGTTCTC +
Preference number: 4 (lower is better)
Translates to: ASKRALCNVKLFGEVAEEGHYEY*PEHRVL
Trigger: GAGAACTCTATGCTCTGGGCAGTATTCATAATGACC...TTCTTCAGCAACTTCTCCAAAGAGTTTCACATTGCACAAGGCTCTTTTGGAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp GGGAGGGTCATGTTGTTTTTAATTGCAAATACAGAAGTCAGACAAGAAGCACCAAATTGTGGGCTGAAGTaGGTGGCTCCATCTTTATTG +
Preference number: 4 (lower is better)
Translates to: GRVMLFLIANTEVRQEAPNCGLK*VAPSLL
Trigger: CAATAAAGATGGAGCCACCCACTTCAGCCCACAATT...TGGTGCTTCTTGTCTGACTTCTGTATTTGCAATTAAAAACAACATGACCCTCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR CAA 72 bp TCTAACGATATCTGGCTGCAGGTGGGGAGGGTCATGTaGTTTTTAATTGCAAATACAGAAGTCAGACAAGAA +
Preference number: 4 (lower is better)
Translates to: SNDIWLQVGRVM*FLIANTEVRQE
Trigger: TTCTTGTCTGACTTCTGTATTTGCAATTAAAAACAACATGACCCTCCCCACCTGCAGCCAGATATCGTTAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR TCA 90 bp GCTTCCAAAAGAGCCTTGTGCAATGTGAAACTCTTTGGAGAAGTTGCTGAAGAAAACATTTGCTCATTATaGAGTCAGGGAGAACAATGC +
Preference number: 4 (lower is better)
Translates to: ASKRALCNVKLFGEVAEENICSL*SQGEQC
Trigger: GCATTGTTCTCCCTGACTTCATAATGAGCAAATGTT...TTCTTCAGCAACTTCTCCAAAGAGTTTCACATTGCACAAGGCTCTTTTGGAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp GTACTGCAACAGCCTTCTATTAAAGTGAAAACAGGAGTGATAGGAATATATTTCGAGTTTCCCATCCACTaGCCCTGCATTGGTGGAATT +
Preference number: 4 (lower is better)
Translates to: VLQQPSIKVKTGVIGIYFEFPIH*PCIGGI
Trigger: AATTCCACCAATGCAGGGGCAGTGGATGGGAAACTC...GAAATATATTCCTATCACTCCTGTTTTCACTTTAATAGAAGGCTGTTGCAGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp GCTTCCAAAAGAGCCTTGTGCAATGTGAAACTCTTTGGAGAAGTTGCTGAAGAATCCAAAAGAGCCTTGTaGAATGTGAAACTCTTTGGA +
Preference number: 4 (lower is better)
Translates to: ASKRALCNVKLFGEVAEESKRAL*NVKLFG
Trigger: TCCAAAGAGTTTCACATTGCACAAGGCTCTTTTGGA...TTCTTCAGCAACTTCTCCAAAGAGTTTCACATTGCACAAGGCTCTTTTGGAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp GTACTGCAACAGCCTTCTATTAAAGTGAAAACAGGAGTGATAGGAATATATTTCAGCCATATGCACATCTaGCCCACTTCCCTAAAGCAC +
Preference number: 4 (lower is better)
Translates to: VLQQPSIKVKTGVIGIYFSHMHI*PTSLKH
Trigger: GTGCTTTAGGGAAGTGGGGCAGATGTGCATATGGCT...GAAATATATTCCTATCACTCCTGTTTTCACTTTAATAGAAGGCTGTTGCAGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp CTAGCATCCAAATTACTTCCTTATTGTGTTTCCTTGCTCAGTGTCAAACAATCCTATAAGAGCCCATCATaGAGTACTGCAACAGCCTTC +
Preference number: 4 (lower is better)
Translates to: LASKLLPYCVSLLSVKQSYKSPS*STATAF
Trigger: GAAGGCTGTTGCAGTACTGCATGATGGGCTCTTATA...GGATTGTTTGACACTGAGCAAGGAAACACAATAAGGAAGTAATTTGGATGCTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp GCTTCCAAAAGAGCCTTGTGCAATGTGAAACTCTTTGGAGAAGTTGCTGAAGAAGAACTAAGTCCAGAATaGTCTCTTCTCTGGATATGT +
Preference number: 4 (lower is better)
Translates to: ASKRALCNVKLFGEVAEEELSPE*SLLWIC
Trigger: ACATATCCAGAGAAGAGAGCATTCTGGACTTAGTTC...TTCTTCAGCAACTTCTCCAAAGAGTTTCACATTGCACAAGGCTCTTTTGGAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405109.5
ENST00000405256.5
CDS-3UTR GCA 90 bp GTCATCACAATCACACAGCTCAGCACCAAAGAAAGCTGTCTCTACTTAGGGTTTAAAAGCTCAACAAGATaGACTGTACGCAATTCTTTG +
Preference number: 4 (lower is better)
Translates to: VITITQLSTKESCLYLGFKSSTR*TVRNSL
Trigger: CAAAGAATTGCGTACAGTGCATCTTGTTGAGCTTTT...AAACCCTAAGTAGAGACAGCTTTCTTTGGTGCTGAGCTGTGTGATTGTGATGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405109.5
ENST00000405256.5
CDS-3UTR CCA 90 bp GTACTGCAACAGCCTTCTATTAAAGTGAAAACAGGAGTGATAGGAATATATTTCCCAAAAGTCCCCATCTaGGTTGTAGATCTCCACCAC +
Preference number: 4 (lower is better)
Translates to: VLQQPSIKVKTGVIGIYFPKVPI*VVDLHH
Trigger: GTGGTGGAGATCTACAACCCAGATGGGGACTTTTGG...GAAATATATTCCTATCACTCCTGTTTTCACTTTAATAGAAGGCTGTTGCAGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR TCA 90 bp GTACTGCAACAGCCTTCTATTAAAGTGAAAACAGGAGTGATAGGAATATATTTCGGAGTGACTGTCTTCTaGTTATGCTCAATTGTGGGC +
Preference number: 4 (lower is better)
Translates to: VLQQPSIKVKTGVIGIYFGVTVF*LCSIVG
Trigger: GCCCACAATTGAGCATAATCAGAAGACAGTCACTCC...GAAATATATTCCTATCACTCCTGTTTTCACTTTAATAGAAGGCTGTTGCAGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR TCA 90 bp GGGAGGGTCATGTTGTTTTTAATTGCAAATACAGAAGTCAGACAAGAAGCACCAAACATTTGCTCATTATaGAGTCAGGGAGAACAATGC +
Preference number: 4 (lower is better)
Translates to: GRVMLFLIANTEVRQEAPNICSL*SQGEQC
Trigger: GCATTGTTCTCCCTGACTTCATAATGAGCAAATGTT...TGGTGCTTCTTGTCTGACTTCTGTATTTGCAATTAAAAACAACATGACCCTCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp CTAGCATCCAAATTACTTCCTTATTGTGTTTCCTTGCTCAGTGTCAAACAATCCGACCTACACAGCCAATaGCACCCAAAACATAAATCT +
Preference number: 4 (lower is better)
Translates to: LASKLLPYCVSLLSVKQSDLHSQ*HPKHKS
Trigger: AGATTTATGTTTTGGGTGGCATTGGCTGTGTAGGTC...GGATTGTTTGACACTGAGCAAGGAAACACAATAAGGAAGTAATTTGGATGCTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp GGGAGGGTCATGTTGTTTTTAATTGCAAATACAGAAGTCAGACAAGAAGCACCATCCAAAAGAGCCTTGTaGAATGTGAAACTCTTTGGA +
Preference number: 4 (lower is better)
Translates to: GRVMLFLIANTEVRQEAPSKRAL*NVKLFG
Trigger: TCCAAAGAGTTTCACATTGCACAAGGCTCTTTTGGA...TGGTGCTTCTTGTCTGACTTCTGTATTTGCAATTAAAAACAACATGACCCTCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR TCA 90 bp GGGAGGGTCATGTTGTTTTTAATTGCAAATACAGAAGTCAGACAAGAAGCACCACGCAATTCTTTGTTATaGTTTACCCATCTCAGAACT +
Preference number: 4 (lower is better)
Translates to: GRVMLFLIANTEVRQEAPRNSLL*FTHLRT
Trigger: AGTTCTGAGATGGGTAAATCATAACAAAGAATTGCG...TGGTGCTTCTTGTCTGACTTCTGTATTTGCAATTAAAAACAACATGACCCTCCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405109.5
ENST00000405256.5
CDS-3UTR GCA 90 bp GTACTGCAACAGCCTTCTATTAAAGTGAAAACAGGAGTGATAGGAATATATTTCCACCTTAGTGCTCATTaGCTTCTTCCACCAAATCTG +
Preference number: 4 (lower is better)
Translates to: VLQQPSIKVKTGVIGIYFHLSAH*LLPPNL
Trigger: CAGATTTGGTGGAAGAAGGCAATGAGCACTAAGGTG...GAAATATATTCCTATCACTCCTGTTTTCACTTTAATAGAAGGCTGTTGCAGTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CCA 90 bp GTACTGCAACAGCCTTCTATTAAAGTGAAAACAGGAGTGATAGGAATATATTTCTTGGAGATAACCTCATaGCGATCTGCTCCATGGAAT +
Preference number: 4 (lower is better)
Translates to: VLQQPSIKVKTGVIGIYFLEITS*RSAPWN
Trigger: ATTCCATGGAGCAGATCGCCATGAGGTTATCTCCAA...GAAATATATTCCTATCACTCCTGTTTTCACTTTAATAGAAGGCTGTTGCAGTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
3UTR CAA 72 bp AGCCTAGCATCCAAATTACTTCCTTATTGTGTTTCCTaGCTCAGTGTCAAACAATCCTGTCACAAAGATAAG +
Preference number: 4 (lower is better)
Translates to: SLASKLLPYCVS*LSVKQSCHKDK
Trigger: CTTATCTTTGTGACAGGATTGTTTGACACTGAGCAAGGAAACACAATAAGGAAGTAATTTGGATGCTAGGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp CTAGCATCCAAATTACTTCCTTATTGTGTTTCCTTGCTCAGTGTCAAACAATCCAAATTTCTCTCCTTCTaGTGTGAGTACCACATCAAT +
Preference number: 4 (lower is better)
Translates to: LASKLLPYCVSLLSVKQSKFLSF*CEYHIN
Trigger: ATTGATGTGGTACTCACAGCAGAAGGAGAGAAATTT...GGATTGTTTGACACTGAGCAAGGAAACACAATAAGGAAGTAATTTGGATGCTAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405109.5
ENST00000405256.5
CDS-3UTR CCA 90 bp GTACTGCAACAGCCTTCTATTAAAGTGAAAACAGGAGTGATAGGAATATATTTCCATTCTTTCAGGCGTTaGTCATCTAGCTACAACCTA +
Preference number: 4 (lower is better)
Translates to: VLQQPSIKVKTGVIGIYFHSFRR*SSSYNL
Trigger: TAGGTTGTAGCTAGATGACCAACGCCTGAAAGAATG...GAAATATATTCCTATCACTCCTGTTTTCACTTTAATAGAAGGCTGTTGCAGTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR TCA 90 bp GTACTGCAACAGCCTTCTATTAAAGTGAAAACAGGAGTGATAGGAATATATTTCTTACAAGTTCCAATCTaGCTTGCTTCAAAAGCTCAA +
Preference number: 4 (lower is better)
Translates to: VLQQPSIKVKTGVIGIYFLQVPI*LASKAQ
Trigger: TTGAGCTTTTGAAGCAAGTCAGATTGGAACTTGTAA...GAAATATATTCCTATCACTCCTGTTTTCACTTTAATAGAAGGCTGTTGCAGTAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405109.5
ENST00000405256.5
CDS-3UTR GCA 90 bp GTACTGCAACAGCCTTCTATTAAAGTGAAAACAGGAGTGATAGGAATATATTTCCTCGAAATTCAGCTGTaGATAACTTTTCCCAAAACT +
Preference number: 4 (lower is better)
Translates to: VLQQPSIKVKTGVIGIYFLEIQL*ITFPKT
Trigger: AGTTTTGGGAAAAGTTATGCACAGCTGAATTTCGAG...GAAATATATTCCTATCACTCCTGTTTTCACTTTAATAGAAGGCTGTTGCAGTAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR GCA 90 bp GTACTGCAACAGCCTTCTATTAAAGTGAAAACAGGAGTGATAGGAATATATTTCAAATTTCTCTCCTTCTaGTGTGAGTACCACATCAAT +
Preference number: 4 (lower is better)
Translates to: VLQQPSIKVKTGVIGIYFKFLSF*CEYHIN
Trigger: ATTGATGTGGTACTCACAGCAGAAGGAGAGAAATTT...GAAATATATTCCTATCACTCCTGTTTTCACTTTAATAGAAGGCTGTTGCAGTAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405109.5
ENST00000405256.5
CDS-3UTR CCA 90 bp GTACTGCAACAGCCTTCTATTAAAGTGAAAACAGGAGTGATAGGAATATATTTCGATTCTGAAGGAGAATaGTCAGTGTTTATAAGACTG +
Preference number: 4 (lower is better)
Translates to: VLQQPSIKVKTGVIGIYFDSEGE*SVFIRL
Trigger: CAGTCTTATAAACACTGACCATTCTCCTTCAGAATC...GAAATATATTCCTATCACTCCTGTTTTCACTTTAATAGAAGGCTGTTGCAGTAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS GCA 90 bp GCGGAGGAGGAGGGAGGGCGCTGGCAGCGCCTCCGAGGGGACAGGTaGTGCCCTCTGCTTGGAAGTGGCCCGAGACCACGCCGCCGCTGC +
Preference number: 5 (lower is better)
Translates to: AEEEGGRWQRLRGDR*CPLLGSGPRPRRRC
Trigger: GCAGCGGCGGCGTGGTCTCGGGCCACTTCCAAGCAGAGGGCAGCACCTGTCCCCTCGGAGGCGCTGCCAGCGCCCTCCCTCCTCCTCCGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405109.5
CDS GCA 90 bp AGGGAGGGCGCTGGCAGCGCCTCCGAGGGGACAGGTGCTGCCCTCTaGTTGGAAGTGGCCCGAGACCACGCCGCCGCTGCCCTCCAGCCA +
Preference number: 5 (lower is better)
Translates to: REGAGSASEGTGAAL*LEVARDHAAAALQP
Trigger: TGGCTGGAGGGCAGCGGCGGCGTGGTCTCGGGCCACTTCCAAGCAGAGGGCAGCACCTGTCCCCTCGGAGGCGCTGCCAGCGCCCTCCCT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405109.5
CDS GCA 90 bp GTGGCCCGAGACCACGCCGCCGCTGCCCTCCAGCCACTGTGCGCCTaGGCACCTATTCCCGCGCTGGTTCCAGACGGCGACTACAGCCCC +
Preference number: 5 (lower is better)
Translates to: VARDHAAAALQPLCA*APIPALVPDGDYSP
Trigger: GGGGCTGTAGTCGCCGTCTGGAACCAGCGCGGGAATAGGTGCGCAGGCGCACAGTGGCTGGAGGGCAGCGGCGGCGTGGTCTCGGGCCAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405109.5
CDS GCA 90 bp AGGTGCTGCCCTCTGCTTGGAAGTGGCCCGAGACCACGCCGCCGCTaGCCTCCAGCCACTGTGCGCCTGCGCACCTATTCCCGCGCTGGT +
Preference number: 5 (lower is better)
Translates to: RCCPLLGSGPRPRRR*PPATVRLRTYSRAG
Trigger: ACCAGCGCGGGAATAGGTGCGCAGGCGCACAGTGGCTGGAGGGCAGCGGCGGCGTGGTCTCGGGCCACTTCCAAGCAGAGGGCAGCACCT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405109.5
CDS GCA 90 bp TTGGAAGTGGCCCGAGACCACGCCGCCGCTGCCCTCCAGCCACTGTaGGCCTGCGCACCTATTCCCGCGCTGGTTCCAGACGGCGACTAC +
Preference number: 5 (lower is better)
Translates to: LEVARDHAAAALQPL*ACAPIPALVPDGDY
Trigger: GTAGTCGCCGTCTGGAACCAGCGCGGGAATAGGTGCGCAGGCGCACAGTGGCTGGAGGGCAGCGGCGGCGTGGTCTCGGGCCACTTCCAA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405109.5
CDS-3UTR CAA 90 bp CCTGGCTTGGGTGGCTTGGGCGAGTCCTGTTCAGCCAGGACTACCCTGCAGATGGTGAGAGGAGGGGACTaGGCATGGGAGGGCCCTCTC +
Preference number: 5 (lower is better)
Translates to: PGLGGLGESCSARTTLQMVRGGD*AWEGPL
Trigger: GAGAGGGCCCTCCCATGCCAAGTCCCCTCCTCTCAC...CATCTGCAGGGTAGTCCTGGCTGAACAGGACTCGCCCAAGCCACCCAAGCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CAA 90 bp CCTGGCTTGGGTGGCTTGGGCGAGTCCTGTTCAGCCAGGACTACCCTGCAGATGTTCTCTGTCCCTGGCTaGGGTGGCTTGGGCGAGTCC +
Preference number: 5 (lower is better)
Translates to: PGLGGLGESCSARTTLQMFSVPG*GGLGES
Trigger: GGACTCGCCCAAGCCACCCAAGCCAGGGACAGAGAA...CATCTGCAGGGTAGTCCTGGCTGAACAGGACTCGCCCAAGCCACCCAAGCCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CAA 90 bp CTGATTGAGAAACACTGCCCCATGCCGGCCACCCAAGAGGTCACCCACATGCCAGGGCCACGACCTGGCTaGGACGCTACCGTGTGGCAG +
Preference number: 5 (lower is better)
Translates to: LIEKHCPMPATQEVTHMPGPRPG*DATVWQ
Trigger: CTGCCACACGGTAGCGTCCAAGCCAGGTCGTGGCCC...TGGCATGTGGGTGACCTCTTGGGTGGCCGGCATGGGGCAGTGTTTCTCAATCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405109.5
ENST00000407609.7
CDS-3UTR CAA 90 bp ATGACATGCCAACAAGGCCTCCTTGAGCCAGGGAGACGCGGCAGCTTTCTGGACCCTGGCTTGGGTGGCTaGGGCGAGTCCTGTTCAGCC +
Preference number: 5 (lower is better)
Translates to: MTCQQGLLEPGRRGSFLDPGLGG*GESCSA
Trigger: GGCTGAACAGGACTCGCCCAAGCCACCCAAGCCAGG...GTCCAGAAAGCTGCCGCGTCTCCCTGGCTCAAGGAGGCCTTGTTGGCATGTCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CAA 90 bp CTCCTGGTCACTGCCCTCCTGGCTCCAGCAGAGGTCATGCCCCTTCTCGGTCCTTGCCCGCACACTCCATaGATCTTGGCTGGGGTCATA +
Preference number: 5 (lower is better)
Translates to: LLVTALLAPAEVMPLLGPCPHTP*ILAGVI
Trigger: TATGACCCCAGCCAAGATCAATGGAGTGTGCGGGCA...AGGACCGAGAAGGGGCATGACCTCTGCTGGAGCCAGGAGGGCAGTGACCAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CAA 90 bp CCTGGCTTGGGTGGCTTGGGCGAGTCCTGTTCAGCCAGGACTACCCTGCAGATGGTGGCTCCATCTTTATaGCAAAGGCCGGGCCATGGG +
Preference number: 5 (lower is better)
Translates to: PGLGGLGESCSARTTLQMVAPSL*QRPGHG
Trigger: CCCATGGCCCGGCCTTTGCAATAAAGATGGAGCCAC...CATCTGCAGGGTAGTCCTGGCTGAACAGGACTCGCCCAAGCCACCCAAGCCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CAA 90 bp AGTAAGCTCACTTTAACTCAGATTCCTGGACGTGCTCGGGGCCCAGGCCCTCTGGCCAACAAGGCCTCCTaGAGCCAGGGAGACGCGGCA +
Preference number: 5 (lower is better)
Translates to: SKLTLTQIPGRARGPGPLANKAS*SQGDAA
Trigger: TGCCGCGTCTCCCTGGCTCAAGGAGGCCTTGTTGGC...CAGAGGGCCTGGGCCCCGAGCACGTCCAGGAATCTGAGTTAAAGTGAGCTTACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS GCA 90 bp AGACATAGAGTTTCCCATCCACTGCCCCTGCATTGGTGGAATTGGTaGGGAGTGAGAGGAGGGGACTTGGCATGGGAGGGCCCTCTCGCC +
Preference number: 5 (lower is better)
Translates to: RHRVSHPLPLHWWNW*GVRGGDLAWEGPLA
Trigger: GGCGAGAGGGCCCTCCCATGCCAAGTCCCCTCCTCTCACTCCGCACCAATTCCACCAATGCAGGGGCAGTGGATGGGAAACTCTATGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
ENST00000476626.5
ENST00000492025.1
CDS-3UTR CAA 90 bp CCTGGCTTGGGTGGCTTGGGCGAGTCCTGTTCAGCCAGGACTACCCTGCAGATGTGCCCGCACACTCCATaGATCTTGGCTGGGGTCATA +
Preference number: 5 (lower is better)
Translates to: PGLGGLGESCSARTTLQMCPHTP*ILAGVI
Trigger: TATGACCCCAGCCAAGATCAATGGAGTGTGCGGGCA...CATCTGCAGGGTAGTCCTGGCTGAACAGGACTCGCCCAAGCCACCCAAGCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CAA 90 bp GCCAGGTACTGTGAGTGCACTTGGGGCACAAGTGCGAAGAGAAAGGCGGGACCCTCCACTGCCCCTGCATaGGTGGAATTGGTGCGGAGT +
Preference number: 5 (lower is better)
Translates to: ARYCECTWGTSAKRKAGPSTAPA*VELVRS
Trigger: ACTCCGCACCAATTCCACCAATGCAGGGGCAGTGGA...GGGTCCCGCCTTTCTCTTCGCACTTGTGCCCCAAGTGCACTCACAGTACCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CAA 90 bp GCCAGGTACTGTGAGTGCACTTGGGGCACAAGTGCGAAGAGAAAGGCGGGACCCGTGGCTCCATCTTTATaGCAAAGGCCGGGCCATGGG +
Preference number: 5 (lower is better)
Translates to: ARYCECTWGTSAKRKAGPVAPSL*QRPGHG
Trigger: CCCATGGCCCGGCCTTTGCAATAAAGATGGAGCCAC...GGGTCCCGCCTTTCTCTTCGCACTTGTGCCCCAAGTGCACTCACAGTACCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CAA 90 bp GCTCAATTGTGGGCTGAAGTGGGTGGCTCCATCTTTATTGCAAAGGCCGGGCCAGCCAACAAGGCCTCCTaGAGCCAGGGAGACGCGGCA +
Preference number: 5 (lower is better)
Translates to: AQLWAEVGGSIFIAKAGPANKAS*SQGDAA
Trigger: TGCCGCGTCTCCCTGGCTCAAGGAGGCCTTGTTGGC...TGGCCCGGCCTTTGCAATAAAGATGGAGCCACCCACTTCAGCCCACAATTGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CAA 90 bp GCCAGGTACTGTGAGTGCACTTGGGGCACAAGTGCGAAGAGAAAGGCGGGACCCAACCTGGCCCTTGTCTaGACCTACACAGCCAATGCC +
Preference number: 5 (lower is better)
Translates to: ARYCECTWGTSAKRKAGPNLALV*TYTANA
Trigger: GGCATTGGCTGTGTAGGTCAAGACAAGGGCCAGGTT...GGGTCCCGCCTTTCTCTTCGCACTTGTGCCCCAAGTGCACTCACAGTACCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CAA 90 bp ATGACATGCCAACAAGGCCTCCTTGAGCCAGGGAGACGCGGCAGCTTTCTGGACCCTGCATTGGTGGAATaGGTGCGGAGTGAGAGGAGG +
Preference number: 5 (lower is better)
Translates to: MTCQQGLLEPGRRGSFLDPALVE*VRSERR
Trigger: CCTCCTCTCACTCCGCACCAATTCCACCAATGCAGG...GTCCAGAAAGCTGCCGCGTCTCCCTGGCTCAAGGAGGCCTTGTTGGCATGTCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CAA 90 bp CTGATTGAGAAACACTGCCCCATGCCGGCCACCCAAGAGGTCACCCACATGCCACCTGCATTGGTGGAATaGGTGCGGAGTGAGAGGAGG +
Preference number: 5 (lower is better)
Translates to: LIEKHCPMPATQEVTHMPPALVE*VRSERR
Trigger: CCTCCTCTCACTCCGCACCAATTCCACCAATGCAGG...TGGCATGTGGGTGACCTCTTGGGTGGCCGGCATGGGGCAGTGTTTCTCAATCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CAA 90 bp CCTGGCTTGGGTGGCTTGGGCGAGTCCTGTTCAGCCAGGACTACCCTGCAGATGCTACCCTGCAGATGGTaGTATGTGTCTGAGAGGTGG +
Preference number: 5 (lower is better)
Translates to: PGLGGLGESCSARTTLQMLPCRW*YVSERW
Trigger: CCACCTCTCAGACACATACAACCATCTGCAGGGTAG...CATCTGCAGGGTAGTCCTGGCTGAACAGGACTCGCCCAAGCCACCCAAGCCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CAA 90 bp GGAAAGAGTAAGCTCACTTTAACTCAGATTCCTGGACGTGCTCGGGGCCCAGGCTTCTCTGTCCCTGGCTaGGGTGGCTTGGGCGAGTCC +
Preference number: 5 (lower is better)
Translates to: GKSKLTLTQIPGRARGPGFSVPG*GGLGES
Trigger: GGACTCGCCCAAGCCACCCAAGCCAGGGACAGAGAA...GCCTGGGCCCCGAGCACGTCCAGGAATCTGAGTTAAAGTGAGCTTACTCTTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CAA 90 bp CCTGGCTTGGGTGGCTTGGGCGAGTCCTGTTCAGCCAGGACTACCCTGCAGATGGATCCGAGTAAACCCTaGCTTAACTCTCAGCCGCCA +
Preference number: 5 (lower is better)
Translates to: PGLGGLGESCSARTTLQMDPSKP*LNSQPP
Trigger: TGGCGGCTGAGAGTTAAGCAAGGGTTTACTCGGATC...CATCTGCAGGGTAGTCCTGGCTGAACAGGACTCGCCCAAGCCACCCAAGCCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CAA 90 bp GGAAAGAGTAAGCTCACTTTAACTCAGATTCCTGGACGTGCTCGGGGCCCAGGCTGGGGCAGGCTGTGGTaGACAGCTGCAGGCTTCTGC +
Preference number: 5 (lower is better)
Translates to: GKSKLTLTQIPGRARGPGWGRLW*TAAGFC
Trigger: GCAGAAGCCTGCAGCTGTCAACCACAGCCTGCCCCA...GCCTGGGCCCCGAGCACGTCCAGGAATCTGAGTTAAAGTGAGCTTACTCTTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CAA 90 bp CTGATTGAGAAACACTGCCCCATGCCGGCCACCCAAGAGGTCACCCACATGCCATGCCCGCACACTCCATaGATCTTGGCTGGGGTCATA +
Preference number: 5 (lower is better)
Translates to: LIEKHCPMPATQEVTHMPCPHTP*ILAGVI
Trigger: TATGACCCCAGCCAAGATCAATGGAGTGTGCGGGCA...TGGCATGTGGGTGACCTCTTGGGTGGCCGGCATGGGGCAGTGTTTCTCAATCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CAA 90 bp GCCAGGTACTGTGAGTGCACTTGGGGCACAAGTGCGAAGAGAAAGGCGGGACCCTCCGTTCTGAAGGCCTaGTTTGCAGAACAGCAGGAG +
Preference number: 5 (lower is better)
Translates to: ARYCECTWGTSAKRKAGPSVLKA*FAEQQE
Trigger: CTCCTGCTGTTCTGCAAACAAGGCCTTCAGAACGGA...GGGTCCCGCCTTTCTCTTCGCACTTGTGCCCCAAGTGCACTCACAGTACCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CAA 90 bp CATCTGAAATCTGTGAAGCACCGGTTTCGACCTCGGGGATTCCTCAGAAGAAGTGGCCGGGCCATGGGGTaGGCAGCAGCTGGAGGAGAT +
Preference number: 5 (lower is better)
Translates to: HLKSVKHRFRPRGFLRRSGRAMG*AAAGGD
Trigger: ATCTCCTCCAGCTGCTGCCAACCCCATGGCCCGGCC...ACTTCTTCTGAGGAATCCCCGAGGTCGAAACCGGTGCTTCACAGATTTCAGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CAA 90 bp CTCCTGGTCACTGCCCTCCTGGCTCCAGCAGAGGTCATGCCCCTTCTCGGTCCTATGAAGATGCCCTCATaGAATCCACTGTGCTTCCAG +
Preference number: 5 (lower is better)
Translates to: LLVTALLAPAEVMPLLGPMKMPS*NPLCFQ
Trigger: CTGGAAGCACAGTGGATTCAATGAGGGCATCTTCAT...AGGACCGAGAAGGGGCATGACCTCTGCTGGAGCCAGGAGGGCAGTGACCAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CAA 90 bp ATGACATGCCAACAAGGCCTCCTTGAGCCAGGGAGACGCGGCAGCTTTCTGGACCAACAGGCTCCAGTTTaGGCAAGACCTGCCTGTCCT +
Preference number: 5 (lower is better)
Translates to: MTCQQGLLEPGRRGSFLDQQAPV*ARPACP
Trigger: AGGACAGGCAGGTCTTGCCAAAACTGGAGCCTGTTG...GTCCAGAAAGCTGCCGCGTCTCCCTGGCTCAAGGAGGCCTTGTTGGCATGTCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CAA 90 bp GCCAGGTACTGTGAGTGCACTTGGGGCACAAGTGCGAAGAGAAAGGCGGGACCCTCCTGGTCCCTCTCCTaGGTGGCAGAAATAGGTTTC +
Preference number: 5 (lower is better)
Translates to: ARYCECTWGTSAKRKAGPSWSLS*VAEIGF
Trigger: GAAACCTATTTCTGCCACCAAGGAGAGGGACCAGGA...GGGTCCCGCCTTTCTCTTCGCACTTGTGCCCCAAGTGCACTCACAGTACCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CAA 90 bp ATGAACTCATCATTGACTGCACCCATGGGACCACTTCCTCCTCATCCTTTTGGGGGGCCACGACCTGGCTaGGACGCTACCGTGTGGCAG +
Preference number: 5 (lower is better)
Translates to: MNSSLTAPMGPLPPHPFGGPRPG*DATVWQ
Trigger: CTGCCACACGGTAGCGTCCAAGCCAGGTCGTGGCCC...CCCAAAAGGATGAGGAGGAAGTGGTCCCATGGGTGCAGTCAATGATGAGTTCAT
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000405109.5
ENST00000407609.7
CDS-3UTR CAA 90 bp GCCAGGTACTGTGAGTGCACTTGGGGCACAAGTGCGAAGAGAAAGGCGGGACCCCACACTCCATTGATCTaGGCTGGGGTCATACTGCAA +
Preference number: 5 (lower is better)
Translates to: ARYCECTWGTSAKRKAGPHTPLI*AGVILQ
Trigger: TTGCAGTATGACCCCAGCCAAGATCAATGGAGTGTG...GGGTCCCGCCTTTCTCTTCGCACTTGTGCCCCAAGTGCACTCACAGTACCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CAA 90 bp GGAAAGAGTAAGCTCACTTTAACTCAGATTCCTGGACGTGCTCGGGGCCCAGGCTCCACTGCCCCTGCATaGGTGGAATTGGTGCGGAGT +
Preference number: 5 (lower is better)
Translates to: GKSKLTLTQIPGRARGPGSTAPA*VELVRS
Trigger: ACTCCGCACCAATTCCACCAATGCAGGGGCAGTGGA...GCCTGGGCCCCGAGCACGTCCAGGAATCTGAGTTAAAGTGAGCTTACTCTTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CAA 90 bp CTGATTGAGAAACACTGCCCCATGCCGGCCACCCAAGAGGTCACCCACATGCCATCCGTTCTGAAGGCCTaGTTTGCAGAACAGCAGGAG +
Preference number: 5 (lower is better)
Translates to: LIEKHCPMPATQEVTHMPSVLKA*FAEQQE
Trigger: CTCCTGCTGTTCTGCAAACAAGGCCTTCAGAACGGA...TGGCATGTGGGTGACCTCTTGGGTGGCCGGCATGGGGCAGTGTTTCTCAATCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CAA 90 bp ATGACATGCCAACAAGGCCTCCTTGAGCCAGGGAGACGCGGCAGCTTTCTGGACTCTGTCTCTGGGCCCTaGCTTGGCTGTTTCCATGAA +
Preference number: 5 (lower is better)
Translates to: MTCQQGLLEPGRRGSFLDSVSGP*LGCFHE
Trigger: TTCATGGAAACAGCCAAGCAAGGGCCCAGAGACAGA...GTCCAGAAAGCTGCCGCGTCTCCCTGGCTCAAGGAGGCCTTGTTGGCATGTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CAA 90 bp ATGAACTCATCATTGACTGCACCCATGGGACCACTTCCTCCTCATCCTTTTGGGCCTGGCTTGGGTGGCTaGGGCGAGTCCTGTTCAGCC +
Preference number: 5 (lower is better)
Translates to: MNSSLTAPMGPLPPHPFGPGLGG*GESCSA
Trigger: GGCTGAACAGGACTCGCCCAAGCCACCCAAGCCAGG...CCCAAAAGGATGAGGAGGAAGTGGTCCCATGGGTGCAGTCAATGATGAGTTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CAA 90 bp CCTGGCTTGGGTGGCTTGGGCGAGTCCTGTTCAGCCAGGACTACCCTGCAGATGATGAAGATGCCCTCATaGAATCCACTGTGCTTCCAG +
Preference number: 5 (lower is better)
Translates to: PGLGGLGESCSARTTLQMMKMPS*NPLCFQ
Trigger: CTGGAAGCACAGTGGATTCAATGAGGGCATCTTCAT...CATCTGCAGGGTAGTCCTGGCTGAACAGGACTCGCCCAAGCCACCCAAGCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CAA 90 bp CTGATTGAGAAACACTGCCCCATGCCGGCCACCCAAGAGGTCACCCACATGCCATCCTGGTCCCTCTCCTaGGTGGCAGAAATAGGTTTC +
Preference number: 5 (lower is better)
Translates to: LIEKHCPMPATQEVTHMPSWSLS*VAEIGF
Trigger: GAAACCTATTTCTGCCACCAAGGAGAGGGACCAGGA...TGGCATGTGGGTGACCTCTTGGGTGGCCGGCATGGGGCAGTGTTTCTCAATCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CAA 90 bp TGTTTCCATGAACTCATCATTGACTGCACCCATGGGACCACTTCCTCCTCATCCCCCCACCCTCCCGAGTaGAGCCTACTTGGGGCCAAC +
Preference number: 5 (lower is better)
Translates to: CFHELIIDCTHGTTSSSSPHPPE*SLLGAN
Trigger: GTTGGCCCCAAGTAGGCTCAACTCGGGAGGGTGGGG...GGATGAGGAGGAAGTGGTCCCATGGGTGCAGTCAATGATGAGTTCATGGAAACA
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CAA 90 bp TTGGTGGCAGAAATAGGTTTCCAACAGGCTCCAGTTTTGGCAAGACCTGCCTGTCCCCACCCTCCCGAGTaGAGCCTACTTGGGGCCAAC +
Preference number: 5 (lower is better)
Translates to: LVAEIGFQQAPVLARPACPHPPE*SLLGAN
Trigger: GTTGGCCCCAAGTAGGCTCAACTCGGGAGGGTGGGG...ACAGGCAGGTCTTGCCAAAACTGGAGCCTGTTGGAAACCTATTTCTGCCACCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CAA 90 bp GCTCAATTGTGGGCTGAAGTGGGTGGCTCCATCTTTATTGCAAAGGCCGGGCCAGTTTACCCACTTATCTaGCCTCCCACAGGCGGGCGA +
Preference number: 5 (lower is better)
Translates to: AQLWAEVGGSIFIAKAGPVYPLI*PPTGGR
Trigger: TCGCCCGCCTGTGGGAGGCAAGATAAGTGGGTAAAC...TGGCCCGGCCTTTGCAATAAAGATGGAGCCACCCACTTCAGCCCACAATTGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CAA 90 bp CTTCTTTGTAGTGTCTTATTTACCCTATCAGGCTGGGAAGTCCCTGAAGGGAGAGGCCGGGCCATGGGGTaGGCAGCAGCTGGAGGAGAT +
Preference number: 5 (lower is better)
Translates to: LLCSVLFTLSGWEVPEGRGRAMG*AAAGGD
Trigger: ATCTCCTCCAGCTGCTGCCAACCCCATGGCCCGGCC...TCTCCCTTCAGGGACTTCCCAGCCTGATAGGGTAAATAAGACACTACAAAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CAA 90 bp GAGGCCGTCCTCAACCCTGGCCGCCGACAGCCAACACAGCAGCTAGGAGGAACATACTGCAACAGTTTGTaGCTTAATCGATCAGGTTCT +
Preference number: 5 (lower is better)
Translates to: EAVLNPGRRQPTQQLGGTYCNSL*LNRSGS
Trigger: AGAACCTGATCGATTAAGCAACAAACTGTTGCAGTA...TGTTCCTCCTAGCTGCTGTGTTGGCTGTCGGCGGCCAGGGTTGAGGACGGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CAA 90 bp TTGTCTCCCTCTGAATTTACTGACCACTCCTGCTTCCAAAAGAGCCTTGTGCAAGTGAGAGGAGGGGACTaGGCATGGGAGGGCCCTCTC +
Preference number: 5 (lower is better)
Translates to: LSPSEFTDHSCFQKSLVQVRGGD*AWEGPL
Trigger: GAGAGGGCCCTCCCATGCCAAGTCCCCTCCTCTCAC...TTGCACAAGGCTCTTTTGGAAGCAGGAGTGGTCAGTAAATTCAGAGGGAGACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CAA 90 bp CTCCTGGTCACTGCCCTCCTGGCTCCAGCAGAGGTCATGCCCCTTCTCGGTCCTAGTTCCAATATTTCTTaGGAGATAACCTCATGGCGA +
Preference number: 5 (lower is better)
Translates to: LLVTALLAPAEVMPLLGPSSNIS*EITSWR
Trigger: TCGCCATGAGGTTATCTCCAAAGAAATATTGGAACT...AGGACCGAGAAGGGGCATGACCTCTGCTGGAGCCAGGAGGGCAGTGACCAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CAA 90 bp GCTCAATTGTGGGCTGAAGTGGGTGGCTCCATCTTTATTGCAAAGGCCGGGCCATCCGTTCTGAAGGCCTaGTTTGCAGAACAGCAGGAG +
Preference number: 5 (lower is better)
Translates to: AQLWAEVGGSIFIAKAGPSVLKA*FAEQQE
Trigger: CTCCTGCTGTTCTGCAAACAAGGCCTTCAGAACGGA...TGGCCCGGCCTTTGCAATAAAGATGGAGCCACCCACTTCAGCCCACAATTGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CAA 90 bp GCTCAATTGTGGGCTGAAGTGGGTGGCTCCATCTTTATTGCAAAGGCCGGGCCACTACCCTGCAGATGGTaGTATGTGTCTGAGAGGTGG +
Preference number: 5 (lower is better)
Translates to: AQLWAEVGGSIFIAKAGPLPCRW*YVSERW
Trigger: CCACCTCTCAGACACATACAACCATCTGCAGGGTAG...TGGCCCGGCCTTTGCAATAAAGATGGAGCCACCCACTTCAGCCCACAATTGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CAA 90 bp AGTAAGCTCACTTTAACTCAGATTCCTGGACGTGCTCGGGGCCCAGGCCCTCTGTCTGATTATGCTCAATaGTGGGCTGAAGTGGGTGGC +
Preference number: 5 (lower is better)
Translates to: SKLTLTQIPGRARGPGPLSDYAQ*WAEVGG
Trigger: GCCACCCACTTCAGCCCACAATTGAGCATAATCAGA...CAGAGGGCCTGGGCCCCGAGCACGTCCAGGAATCTGAGTTAAAGTGAGCTTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CAA 90 bp CCTGGCTTGGGTGGCTTGGGCGAGTCCTGTTCAGCCAGGACTACCCTGCAGATGGCTTCCAAAAGAGCCTaGTGCAATGTGAAACTCTTT +
Preference number: 5 (lower is better)
Translates to: PGLGGLGESCSARTTLQMASKRA*CNVKLF
Trigger: AAAGAGTTTCACATTGCACAAGGCTCTTTTGGAAGC...CATCTGCAGGGTAGTCCTGGCTGAACAGGACTCGCCCAAGCCACCCAAGCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CAA 90 bp TTGTCTCCCTCTGAATTTACTGACCACTCCTGCTTCCAAAAGAGCCTTGTGCAACCCCACCCTCCCGAGTaGAGCCTACTTGGGGCCAAC +
Preference number: 5 (lower is better)
Translates to: LSPSEFTDHSCFQKSLVQPHPPE*SLLGAN
Trigger: GTTGGCCCCAAGTAGGCTCAACTCGGGAGGGTGGGG...TTGCACAAGGCTCTTTTGGAAGCAGGAGTGGTCAGTAAATTCAGAGGGAGACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CAA 90 bp GAGGCCGTCCTCAACCCTGGCCGCCGACAGCCAACACAGCAGCTAGGAGGAACATTTAGAAAGGTCATCTaGCCCAAGTTCACATGGTTA +
Preference number: 5 (lower is better)
Translates to: EAVLNPGRRQPTQQLGGTFRKVI*PKFTWL
Trigger: TAACCATGTGAACTTGGGCAAGATGACCTTTCTAAA...TGTTCCTCCTAGCTGCTGTGTTGGCTGTCGGCGGCCAGGGTTGAGGACGGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CAA 90 bp TTGTCTCCCTCTGAATTTACTGACCACTCCTGCTTCCAAAAGAGCCTTGTGCAACCTGGGAGGCGGAGGTaGCAGTGGGCTGAGATCGTG +
Preference number: 5 (lower is better)
Translates to: LSPSEFTDHSCFQKSLVQPGRRR*QWAEIV
Trigger: CACGATCTCAGCCCACTGCAACCTCCGCCTCCCAGG...TTGCACAAGGCTCTTTTGGAAGCAGGAGTGGTCAGTAAATTCAGAGGGAGACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CAA 90 bp TTTGGGAGTGACTGTCTTCTGATTATGCTCAATTGTGGGCTGAAGTGGGTGGCTTGGGGCAGGCTGTGGTaGACAGCTGCAGGCTTCTGC +
Preference number: 5 (lower is better)
Translates to: FGSDCLLIMLNCGLKWVAWGRLW*TAAGFC
Trigger: GCAGAAGCCTGCAGCTGTCAACCACAGCCTGCCCCA...AGCCACCCACTTCAGCCCACAATTGAGCATAATCAGAAGACAGTCACTCCCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CAA 90 bp GTCATCACAATCACACAGCTCAGCACCAAAGAAAGCTGTCTCTACTTAGGGTTTGTGAGAGGAGGGGACTaGGCATGGGAGGGCCCTCTC +
Preference number: 5 (lower is better)
Translates to: VITITQLSTKESCLYLGFVRGGD*AWEGPL
Trigger: GAGAGGGCCCTCCCATGCCAAGTCCCCTCCTCTCAC...AAACCCTAAGTAGAGACAGCTTTCTTTGGTGCTGAGCTGTGTGATTGTGATGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CAA 90 bp CTTCTTTGTAGTGTCTTATTTACCCTATCAGGCTGGGAAGTCCCTGAAGGGAGATTCTCTGTCCCTGGCTaGGGTGGCTTGGGCGAGTCC +
Preference number: 5 (lower is better)
Translates to: LLCSVLFTLSGWEVPEGRFSVPG*GGLGES
Trigger: GGACTCGCCCAAGCCACCCAAGCCAGGGACAGAGAA...TCTCCCTTCAGGGACTTCCCAGCCTGATAGGGTAAATAAGACACTACAAAGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CAA 90 bp CATCTGAAATCTGTGAAGCACCGGTTTCGACCTCGGGGATTCCTCAGAAGAAGTGTGGCTCCATCTTTATaGCAAAGGCCGGGCCATGGG +
Preference number: 5 (lower is better)
Translates to: HLKSVKHRFRPRGFLRRSVAPSL*QRPGHG
Trigger: CCCATGGCCCGGCCTTTGCAATAAAGATGGAGCCAC...ACTTCTTCTGAGGAATCCCCGAGGTCGAAACCGGTGCTTCACAGATTTCAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CAA 90 bp AGAAAGCTGTCTCTACTTAGGGTTTGTCTCCCTCTGAATTTACTGACCACTCCTCCTGGGAGGCGGAGGTaGCAGTGGGCTGAGATCGTG +
Preference number: 5 (lower is better)
Translates to: RKLSLLRVCLPLNLLTTPPGRRR*QWAEIV
Trigger: CACGATCTCAGCCCACTGCAACCTCCGCCTCCCAGG...AGGAGTGGTCAGTAAATTCAGAGGGAGACAAACCCTAAGTAGAGACAGCTTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CAA 90 bp AAGCCATATGCACATCTGCCCCACTTCCCTAAAGCACTGAGTCTGTTTTGGGCAGTTTACCCACTTATCTaGCCTCCCACAGGCGGGCGA +
Preference number: 5 (lower is better)
Translates to: KPYAHLPHFPKALSLFWAVYPLI*PPTGGR
Trigger: TCGCCCGCCTGTGGGAGGCAAGATAAGTGGGTAAAC...TGCCCAAAACAGACTCAGTGCTTTAGGGAAGTGGGGCAGATGTGCATATGGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CAA 90 bp CTCCTGGTCACTGCCCTCCTGGCTCCAGCAGAGGTCATGCCCCTTCTCGGTCCTCAGGCAAGCAATCTGTaGTATGGAATCAAAGAAAAA +
Preference number: 5 (lower is better)
Translates to: LLVTALLAPAEVMPLLGPQASNL*YGIKEK
Trigger: TTTTTCTTTGATTCCATACAACAGATTGCTTGCCTG...AGGACCGAGAAGGGGCATGACCTCTGCTGGAGCCAGGAGGGCAGTGACCAGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CAA 90 bp ATGACATGCCAACAAGGCCTCCTTGAGCCAGGGAGACGCGGCAGCTTTCTGGACCATCACACAGAAGCATaGTGTTCCTTCTTAGGGCTT +
Preference number: 5 (lower is better)
Translates to: MTCQQGLLEPGRRGSFLDHHTEA*CSFLGL
Trigger: AAGCCCTAAGAAGGAACACAATGCTTCTGTGTGATG...GTCCAGAAAGCTGCCGCGTCTCCCTGGCTCAAGGAGGCCTTGTTGGCATGTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405109.5
ENST00000405256.5
CDS-3UTR CAA 90 bp CATCTGAAATCTGTGAAGCACCGGTTTCGACCTCGGGGATTCCTCAGAAGAAGTAACCTGGCCCTTGTCTaGACCTACACAGCCAATGCC +
Preference number: 5 (lower is better)
Translates to: HLKSVKHRFRPRGFLRRSNLALV*TYTANA
Trigger: GGCATTGGCTGTGTAGGTCAAGACAAGGGCCAGGTT...ACTTCTTCTGAGGAATCCCCGAGGTCGAAACCGGTGCTTCACAGATTTCAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CAA 90 bp TTTGGGAGTGACTGTCTTCTGATTATGCTCAATTGTGGGCTGAAGTGGGTGGCTTCCACTGCCCCTGCATaGGTGGAATTGGTGCGGAGT +
Preference number: 5 (lower is better)
Translates to: FGSDCLLIMLNCGLKWVASTAPA*VELVRS
Trigger: ACTCCGCACCAATTCCACCAATGCAGGGGCAGTGGA...AGCCACCCACTTCAGCCCACAATTGAGCATAATCAGAAGACAGTCACTCCCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CAA 90 bp AAGCCATATGCACATCTGCCCCACTTCCCTAAAGCACTGAGTCTGTTTTGGGCACAACAGGCTCCAGTTTaGGCAAGACCTGCCTGTCCT +
Preference number: 5 (lower is better)
Translates to: KPYAHLPHFPKALSLFWAQQAPV*ARPACP
Trigger: AGGACAGGCAGGTCTTGCCAAAACTGGAGCCTGTTG...TGCCCAAAACAGACTCAGTGCTTTAGGGAAGTGGGGCAGATGTGCATATGGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CAA 90 bp AAGATCAGACATCTGAAATCTGTGAAGCACCGGTTTCGACCTCGGGGATTCCTCCAACAGGCTCCAGTTTaGGCAAGACCTGCCTGTCCT +
Preference number: 5 (lower is better)
Translates to: KIRHLKSVKHRFRPRGFLQQAPV*ARPACP
Trigger: AGGACAGGCAGGTCTTGCCAAAACTGGAGCCTGTTG...GAGGAATCCCCGAGGTCGAAACCGGTGCTTCACAGATTTCAGATGTCTGATCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CAA 90 bp GCTTCCAAAAGAGCCTTGTGCAATGTGAAACTCTTTGGAGAAGTTGCTGAAGAACCTGGGAGGCGGAGGTaGCAGTGGGCTGAGATCGTG +
Preference number: 5 (lower is better)
Translates to: ASKRALCNVKLFGEVAEEPGRRR*QWAEIV
Trigger: CACGATCTCAGCCCACTGCAACCTCCGCCTCCCAGG...TTCTTCAGCAACTTCTCCAAAGAGTTTCACATTGCACAAGGCTCTTTTGGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CAA 90 bp TTTGGGAGTGACTGTCTTCTGATTATGCTCAATTGTGGGCTGAAGTGGGTGGCTGTTTACCCACTTATCTaGCCTCCCACAGGCGGGCGA +
Preference number: 5 (lower is better)
Translates to: FGSDCLLIMLNCGLKWVAVYPLI*PPTGGR
Trigger: TCGCCCGCCTGTGGGAGGCAAGATAAGTGGGTAAAC...AGCCACCCACTTCAGCCCACAATTGAGCATAATCAGAAGACAGTCACTCCCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CAA 90 bp CCTGGCTTGGGTGGCTTGGGCGAGTCCTGTTCAGCCAGGACTACCCTGCAGATGCAAATTACTTCCTTATaGTGTTTCCTTGCTCAGTGT +
Preference number: 5 (lower is better)
Translates to: PGLGGLGESCSARTTLQMQITSL*CFLAQC
Trigger: ACACTGAGCAAGGAAACACAATAAGGAAGTAATTTG...CATCTGCAGGGTAGTCCTGGCTGAACAGGACTCGCCCAAGCCACCCAAGCCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CAA 90 bp CCTGGCTTGGGTGGCTTGGGCGAGTCCTGTTCAGCCAGGACTACCCTGCAGATGGTCCATCATATATTTTaGACACACACTGAAGACTTC +
Preference number: 5 (lower is better)
Translates to: PGLGGLGESCSARTTLQMVHHIF*THTEDF
Trigger: GAAGTCTTCAGTGTGTGTCAAAAATATATGATGGAC...CATCTGCAGGGTAGTCCTGGCTGAACAGGACTCGCCCAAGCCACCCAAGCCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405109.5
ENST00000405256.5
CDS-3UTR CAA 90 bp ATGACATGCCAACAAGGCCTCCTTGAGCCAGGGAGACGCGGCAGCTTTCTGGACTACTGCAACAGTTTGTaGCTTAATCGATCAGGTTCT +
Preference number: 5 (lower is better)
Translates to: MTCQQGLLEPGRRGSFLDYCNSL*LNRSGS
Trigger: AGAACCTGATCGATTAAGCAACAAACTGTTGCAGTA...GTCCAGAAAGCTGCCGCGTCTCCCTGGCTCAAGGAGGCCTTGTTGGCATGTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CAA 90 bp GGGAGGGTCATGTTGTTTTTAATTGCAAATACAGAAGTCAGACAAGAAGCACCAGTGAGAGGAGGGGACTaGGCATGGGAGGGCCCTCTC +
Preference number: 5 (lower is better)
Translates to: GRVMLFLIANTEVRQEAPVRGGD*AWEGPL
Trigger: GAGAGGGCCCTCCCATGCCAAGTCCCCTCCTCTCAC...TGGTGCTTCTTGTCTGACTTCTGTATTTGCAATTAAAAACAACATGACCCTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CAA 90 bp CATCTGAAATCTGTGAAGCACCGGTTTCGACCTCGGGGATTCCTCAGAAGAAGTCTACCCTGCAGATGGTaGTATGTGTCTGAGAGGTGG +
Preference number: 5 (lower is better)
Translates to: HLKSVKHRFRPRGFLRRSLPCRW*YVSERW
Trigger: CCACCTCTCAGACACATACAACCATCTGCAGGGTAG...ACTTCTTCTGAGGAATCCCCGAGGTCGAAACCGGTGCTTCACAGATTTCAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CAA 90 bp CTAGCATCCAAATTACTTCCTTATTGTGTTTCCTTGCTCAGTGTCAAACAATCCGGCCGGGCCATGGGGTaGGCAGCAGCTGGAGGAGAT +
Preference number: 5 (lower is better)
Translates to: LASKLLPYCVSLLSVKQSGRAMG*AAAGGD
Trigger: ATCTCCTCCAGCTGCTGCCAACCCCATGGCCCGGCC...GGATTGTTTGACACTGAGCAAGGAAACACAATAAGGAAGTAATTTGGATGCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CAA 90 bp ATGACATGCCAACAAGGCCTCCTTGAGCCAGGGAGACGCGGCAGCTTTCTGGACAACTCTTTGGAGAAGTaGCTGAAGAAGAGCTATGAA +
Preference number: 5 (lower is better)
Translates to: MTCQQGLLEPGRRGSFLDNSLEK*LKKSYE
Trigger: TTCATAGCTCTTCTTCAGCAACTTCTCCAAAGAGTT...GTCCAGAAAGCTGCCGCGTCTCCCTGGCTCAAGGAGGCCTTGTTGGCATGTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CAA 90 bp TGTTTCCATGAACTCATCATTGACTGCACCCATGGGACCACTTCCTCCTCATCCTCCTGGTCCCTCTCCTaGGTGGCAGAAATAGGTTTC +
Preference number: 5 (lower is better)
Translates to: CFHELIIDCTHGTTSSSSSWSLS*VAEIGF
Trigger: GAAACCTATTTCTGCCACCAAGGAGAGGGACCAGGA...GGATGAGGAGGAAGTGGTCCCATGGGTGCAGTCAATGATGAGTTCATGGAAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CAA 90 bp GGGAGGGTCATGTTGTTTTTAATTGCAAATACAGAAGTCAGACAAGAAGCACCACCCCACCCTCCCGAGTaGAGCCTACTTGGGGCCAAC +
Preference number: 5 (lower is better)
Translates to: GRVMLFLIANTEVRQEAPPHPPE*SLLGAN
Trigger: GTTGGCCCCAAGTAGGCTCAACTCGGGAGGGTGGGG...TGGTGCTTCTTGTCTGACTTCTGTATTTGCAATTAAAAACAACATGACCCTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CAA 90 bp GGGAGGGTCATGTTGTTTTTAATTGCAAATACAGAAGTCAGACAAGAAGCACCAGCCAACAAGGCCTCCTaGAGCCAGGGAGACGCGGCA +
Preference number: 5 (lower is better)
Translates to: GRVMLFLIANTEVRQEAPANKAS*SQGDAA
Trigger: TGCCGCGTCTCCCTGGCTCAAGGAGGCCTTGTTGGC...TGGTGCTTCTTGTCTGACTTCTGTATTTGCAATTAAAAACAACATGACCCTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CAA 90 bp GGGAGGGTCATGTTGTTTTTAATTGCAAATACAGAAGTCAGACAAGAAGCACCACCTGGGAGGCGGAGGTaGCAGTGGGCTGAGATCGTG +
Preference number: 5 (lower is better)
Translates to: GRVMLFLIANTEVRQEAPPGRRR*QWAEIV
Trigger: CACGATCTCAGCCCACTGCAACCTCCGCCTCCCAGG...TGGTGCTTCTTGTCTGACTTCTGTATTTGCAATTAAAAACAACATGACCCTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CAA 90 bp AAGCCATATGCACATCTGCCCCACTTCCCTAAAGCACTGAGTCTGTTTTGGGCAGATCCGAGTAAACCCTaGCTTAACTCTCAGCCGCCA +
Preference number: 5 (lower is better)
Translates to: KPYAHLPHFPKALSLFWADPSKP*LNSQPP
Trigger: TGGCGGCTGAGAGTTAAGCAAGGGTTTACTCGGATC...TGCCCAAAACAGACTCAGTGCTTTAGGGAAGTGGGGCAGATGTGCATATGGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CAA 90 bp GCCAGGTACTGTGAGTGCACTTGGGGCACAAGTGCGAAGAGAAAGGCGGGACCCGTCCATCATATATTTTaGACACACACTGAAGACTTC +
Preference number: 5 (lower is better)
Translates to: ARYCECTWGTSAKRKAGPVHHIF*THTEDF
Trigger: GAAGTCTTCAGTGTGTGTCAAAAATATATGATGGAC...GGGTCCCGCCTTTCTCTTCGCACTTGTGCCCCAAGTGCACTCACAGTACCTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405109.5
ENST00000405256.5
CDS GCA 90 bp GTTGACTACAGCTGTACTGAATCGGTACTTAGAGTACTTCATGGGTaGCCGCACACTCCATTGATCTTGGCTGGGGTCATACTGCAACAG +
Preference number: 5 (lower is better)
Translates to: VDYSCTESVLRVLHG*PHTPLILAGVILQQ
Trigger: CTGTTGCAGTATGACCCCAGCCAAGATCAATGGAGTGTGCGGGCACCCATGAAGTACTCTAAGTACCGATTCAGTACAGCTGTAGTCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
ENST00000492025.1
CDS-3UTR CAA 90 bp TTGGTGGCAGAAATAGGTTTCCAACAGGCTCCAGTTTTGGCAAGACCTGCCTGTCACACTCCATTGATCTaGGCTGGGGTCATACTGCAA +
Preference number: 5 (lower is better)
Translates to: LVAEIGFQQAPVLARPACHTPLI*AGVILQ
Trigger: TTGCAGTATGACCCCAGCCAAGATCAATGGAGTGTG...ACAGGCAGGTCTTGCCAAAACTGGAGCCTGTTGGAAACCTATTTCTGCCACCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CAA 90 bp AAGCCATATGCACATCTGCCCCACTTCCCTAAAGCACTGAGTCTGTTTTGGGCACACACTCCATTGATCTaGGCTGGGGTCATACTGCAA +
Preference number: 5 (lower is better)
Translates to: KPYAHLPHFPKALSLFWAHTPLI*AGVILQ
Trigger: TTGCAGTATGACCCCAGCCAAGATCAATGGAGTGTG...TGCCCAAAACAGACTCAGTGCTTTAGGGAAGTGGGGCAGATGTGCATATGGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CAA 90 bp AAGATCAGACATCTGAAATCTGTGAAGCACCGGTTTCGACCTCGGGGATTCCTCTCCATGAACTCATCATaGACTGCACCCATGGGACCA +
Preference number: 5 (lower is better)
Translates to: KIRHLKSVKHRFRPRGFLSMNSS*TAPMGP
Trigger: TGGTCCCATGGGTGCAGTCAATGATGAGTTCATGGA...GAGGAATCCCCGAGGTCGAAACCGGTGCTTCACAGATTTCAGATGTCTGATCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CAA 90 bp AAGCCATATGCACATCTGCCCCACTTCCCTAAAGCACTGAGTCTGTTTTGGGCATCCATGAACTCATCATaGACTGCACCCATGGGACCA +
Preference number: 5 (lower is better)
Translates to: KPYAHLPHFPKALSLFWASMNSS*TAPMGP
Trigger: TGGTCCCATGGGTGCAGTCAATGATGAGTTCATGGA...TGCCCAAAACAGACTCAGTGCTTTAGGGAAGTGGGGCAGATGTGCATATGGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CAA 90 bp CTAGCATCCAAATTACTTCCTTATTGTGTTTCCTTGCTCAGTGTCAAACAATCCCCTGGCTTGGGTGGCTaGGGCGAGTCCTGTTCAGCC +
Preference number: 5 (lower is better)
Translates to: LASKLLPYCVSLLSVKQSPGLGG*GESCSA
Trigger: GGCTGAACAGGACTCGCCCAAGCCACCCAAGCCAGG...GGATTGTTTGACACTGAGCAAGGAAACACAATAAGGAAGTAATTTGGATGCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CAA 90 bp TTGGTGGCAGAAATAGGTTTCCAACAGGCTCCAGTTTTGGCAAGACCTGCCTGTTCTGATTATGCTCAATaGTGGGCTGAAGTGGGTGGC +
Preference number: 5 (lower is better)
Translates to: LVAEIGFQQAPVLARPACSDYAQ*WAEVGG
Trigger: GCCACCCACTTCAGCCCACAATTGAGCATAATCAGA...ACAGGCAGGTCTTGCCAAAACTGGAGCCTGTTGGAAACCTATTTCTGCCACCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CAA 90 bp GGAAAGAGTAAGCTCACTTTAACTCAGATTCCTGGACGTGCTCGGGGCCCAGGCGCTTCCAAAAGAGCCTaGTGCAATGTGAAACTCTTT +
Preference number: 5 (lower is better)
Translates to: GKSKLTLTQIPGRARGPGASKRA*CNVKLF
Trigger: AAAGAGTTTCACATTGCACAAGGCTCTTTTGGAAGC...GCCTGGGCCCCGAGCACGTCCAGGAATCTGAGTTAAAGTGAGCTTACTCTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CAA 90 bp ATGAACTCATCATTGACTGCACCCATGGGACCACTTCCTCCTCATCCTTTTGGGTTTGGGCACCTTGCTTaGGGAAGTGCTGACTGCAAT +
Preference number: 5 (lower is better)
Translates to: MNSSLTAPMGPLPPHPFGFGHLA*GSADCN
Trigger: ATTGCAGTCAGCACTTCCCAAAGCAAGGTGCCCAAA...CCCAAAAGGATGAGGAGGAAGTGGTCCCATGGGTGCAGTCAATGATGAGTTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CAA 90 bp ATGACATGCCAACAAGGCCTCCTTGAGCCAGGGAGACGCGGCAGCTTTCTGGACCAAATTACTTCCTTATaGTGTTTCCTTGCTCAGTGT +
Preference number: 5 (lower is better)
Translates to: MTCQQGLLEPGRRGSFLDQITSL*CFLAQC
Trigger: ACACTGAGCAAGGAAACACAATAAGGAAGTAATTTG...GTCCAGAAAGCTGCCGCGTCTCCCTGGCTCAAGGAGGCCTTGTTGGCATGTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CAA 90 bp CTGATTGAGAAACACTGCCCCATGCCGGCCACCCAAGAGGTCACCCACATGCCACAAATTACTTCCTTATaGTGTTTCCTTGCTCAGTGT +
Preference number: 5 (lower is better)
Translates to: LIEKHCPMPATQEVTHMPQITSL*CFLAQC
Trigger: ACACTGAGCAAGGAAACACAATAAGGAAGTAATTTG...TGGCATGTGGGTGACCTCTTGGGTGGCCGGCATGGGGCAGTGTTTCTCAATCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CAA 90 bp GTCATCACAATCACACAGCTCAGCACCAAAGAAAGCTGTCTCTACTTAGGGTTTAACCTGGCCCTTGTCTaGACCTACACAGCCAATGCC +
Preference number: 5 (lower is better)
Translates to: VITITQLSTKESCLYLGFNLALV*TYTANA
Trigger: GGCATTGGCTGTGTAGGTCAAGACAAGGGCCAGGTT...AAACCCTAAGTAGAGACAGCTTTCTTTGGTGCTGAGCTGTGTGATTGTGATGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CAA 90 bp GCTTCCAAAAGAGCCTTGTGCAATGTGAAACTCTTTGGAGAAGTTGCTGAAGAACCTGCATTGGTGGAATaGGTGCGGAGTGAGAGGAGG +
Preference number: 5 (lower is better)
Translates to: ASKRALCNVKLFGEVAEEPALVE*VRSERR
Trigger: CCTCCTCTCACTCCGCACCAATTCCACCAATGCAGG...TTCTTCAGCAACTTCTCCAAAGAGTTTCACATTGCACAAGGCTCTTTTGGAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CAA 90 bp CATCTGAAATCTGTGAAGCACCGGTTTCGACCTCGGGGATTCCTCAGAAGAAGTTCATGCATGAGGACGTaGATGGCTACAACATTCCAC +
Preference number: 5 (lower is better)
Translates to: HLKSVKHRFRPRGFLRRSSCMRT*MATTFH
Trigger: GTGGAATGTTGTAGCCATCAACGTCCTCATGCATGA...ACTTCTTCTGAGGAATCCCCGAGGTCGAAACCGGTGCTTCACAGATTTCAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CAA 90 bp TGTTTCCATGAACTCATCATTGACTGCACCCATGGGACCACTTCCTCCTCATCCTCATGCATGAGGACGTaGATGGCTACAACATTCCAC +
Preference number: 5 (lower is better)
Translates to: CFHELIIDCTHGTTSSSSSCMRT*MATTFH
Trigger: GTGGAATGTTGTAGCCATCAACGTCCTCATGCATGA...GGATGAGGAGGAAGTGGTCCCATGGGTGCAGTCAATGATGAGTTCATGGAAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CAA 90 bp AAGCCATATGCACATCTGCCCCACTTCCCTAAAGCACTGAGTCTGTTTTGGGCATCATGCATGAGGACGTaGATGGCTACAACATTCCAC +
Preference number: 5 (lower is better)
Translates to: KPYAHLPHFPKALSLFWASCMRT*MATTFH
Trigger: GTGGAATGTTGTAGCCATCAACGTCCTCATGCATGA...TGCCCAAAACAGACTCAGTGCTTTAGGGAAGTGGGGCAGATGTGCATATGGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CAA 90 bp TTTGGGAGTGACTGTCTTCTGATTATGCTCAATTGTGGGCTGAAGTGGGTGGCTTCCATGAACTCATCATaGACTGCACCCATGGGACCA +
Preference number: 5 (lower is better)
Translates to: FGSDCLLIMLNCGLKWVASMNSS*TAPMGP
Trigger: TGGTCCCATGGGTGCAGTCAATGATGAGTTCATGGA...AGCCACCCACTTCAGCCCACAATTGAGCATAATCAGAAGACAGTCACTCCCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CAA 90 bp TTGTCTCCCTCTGAATTTACTGACCACTCCTGCTTCCAAAAGAGCCTTGTGCAATCTGTCTCTGGGCCCTaGCTTGGCTGTTTCCATGAA +
Preference number: 5 (lower is better)
Translates to: LSPSEFTDHSCFQKSLVQSVSGP*LGCFHE
Trigger: TTCATGGAAACAGCCAAGCAAGGGCCCAGAGACAGA...TTGCACAAGGCTCTTTTGGAAGCAGGAGTGGTCAGTAAATTCAGAGGGAGACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CAA 90 bp AGAAAGCTGTCTCTACTTAGGGTTTGTCTCCCTCTGAATTTACTGACCACTCCTCAACAGGCTCCAGTTTaGGCAAGACCTGCCTGTCCT +
Preference number: 5 (lower is better)
Translates to: RKLSLLRVCLPLNLLTTPQQAPV*ARPACP
Trigger: AGGACAGGCAGGTCTTGCCAAAACTGGAGCCTGTTG...AGGAGTGGTCAGTAAATTCAGAGGGAGACAAACCCTAAGTAGAGACAGCTTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CAA 90 bp TTTGGGAGTGACTGTCTTCTGATTATGCTCAATTGTGGGCTGAAGTGGGTGGCTTTTGGGCACCTTGCTTaGGGAAGTGCTGACTGCAAT +
Preference number: 5 (lower is better)
Translates to: FGSDCLLIMLNCGLKWVAFGHLA*GSADCN
Trigger: ATTGCAGTCAGCACTTCCCAAAGCAAGGTGCCCAAA...AGCCACCCACTTCAGCCCACAATTGAGCATAATCAGAAGACAGTCACTCCCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CAA 90 bp TTGTCTCCCTCTGAATTTACTGACCACTCCTGCTTCCAAAAGAGCCTTGTGCAAGATCCGAGTAAACCCTaGCTTAACTCTCAGCCGCCA +
Preference number: 5 (lower is better)
Translates to: LSPSEFTDHSCFQKSLVQDPSKP*LNSQPP
Trigger: TGGCGGCTGAGAGTTAAGCAAGGGTTTACTCGGATC...TTGCACAAGGCTCTTTTGGAAGCAGGAGTGGTCAGTAAATTCAGAGGGAGACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CAA 90 bp GCTTCCAAAAGAGCCTTGTGCAATGTGAAACTCTTTGGAGAAGTTGCTGAAGAAGTTTACCCACTTATCTaGCCTCCCACAGGCGGGCGA +
Preference number: 5 (lower is better)
Translates to: ASKRALCNVKLFGEVAEEVYPLI*PPTGGR
Trigger: TCGCCCGCCTGTGGGAGGCAAGATAAGTGGGTAAAC...TTCTTCAGCAACTTCTCCAAAGAGTTTCACATTGCACAAGGCTCTTTTGGAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CAA 90 bp GGAAAGAGTAAGCTCACTTTAACTCAGATTCCTGGACGTGCTCGGGGCCCAGGCGTGGGGAGGGTCATGTaGTTTTTAATTGCAAATACA +
Preference number: 5 (lower is better)
Translates to: GKSKLTLTQIPGRARGPGVGRVM*FLIANT
Trigger: TGTATTTGCAATTAAAAACAACATGACCCTCCCCAC...GCCTGGGCCCCGAGCACGTCCAGGAATCTGAGTTAAAGTGAGCTTACTCTTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CAA 90 bp GCTCAATTGTGGGCTGAAGTGGGTGGCTCCATCTTTATTGCAAAGGCCGGGCCAATTCCTGAAGAATTGTaGCCAATGCAAAGCAGAAGA +
Preference number: 5 (lower is better)
Translates to: AQLWAEVGGSIFIAKAGPIPEEL*PMQSRR
Trigger: TCTTCTGCTTTGCATTGGCAACAATTCTTCAGGAAT...TGGCCCGGCCTTTGCAATAAAGATGGAGCCACCCACTTCAGCCCACAATTGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405109.5
ENST00000405256.5
CDS-3UTR CAA 90 bp TGTTTCCATGAACTCATCATTGACTGCACCCATGGGACCACTTCCTCCTCATCCGACACCCTTTTCCAATaGTCCCGTTCTACAGAGTAC +
Preference number: 5 (lower is better)
Translates to: CFHELIIDCTHGTTSSSSDTLFQ*SRSTEY
Trigger: GTACTCTGTAGAACGGGACAATTGGAAAAGGGTGTC...GGATGAGGAGGAAGTGGTCCCATGGGTGCAGTCAATGATGAGTTCATGGAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS TCA 90 bp CTGAATCGGTACTTAGAGTACTTCATGGGTGCCCGCACACTCCATTaGTCTTGGCTGGGGTCATACTGCAACAGTTTGTTGCTTAATCGA +
Preference number: 5 (lower is better)
Translates to: LNRYLEYFMGARTLH*SWLGSYCNSLLLNR
Trigger: TCGATTAAGCAACAAACTGTTGCAGTATGACCCCAGCCAAGATCAATGGAGTGTGCGGGCACCCATGAAGTACTCTAAGTACCGATTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
ENST00000492025.1
CDS GCA 90 bp GCACACTCCATTGATCTTGGCTGGGGTCATACTGCAACAGTTTGTTaGTTAATCGATCAGGTTCTTCATCAGGAAGATCCATCTGAGGGG +
Preference number: 5 (lower is better)
Translates to: AHSIDLGWGHTATVC*LIDQVLHQEDPSEG
Trigger: CCCCTCAGATGGATCTTCCTGATGAAGAACCTGATCGATTAAGCAACAAACTGTTGCAGTATGACCCCAGCCAAGATCAATGGAGTGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CAA 90 bp AGAAAGCTGTCTCTACTTAGGGTTTGTCTCCCTCTGAATTTACTGACCACTCCTTCTGTCTCTGGGCCCTaGCTTGGCTGTTTCCATGAA +
Preference number: 5 (lower is better)
Translates to: RKLSLLRVCLPLNLLTTPSVSGP*LGCFHE
Trigger: TTCATGGAAACAGCCAAGCAAGGGCCCAGAGACAGA...AGGAGTGGTCAGTAAATTCAGAGGGAGACAAACCCTAAGTAGAGACAGCTTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CAA 90 bp GTCATCACAATCACACAGCTCAGCACCAAAGAAAGCTGTCTCTACTTAGGGTTTCTACCCTGCAGATGGTaGTATGTGTCTGAGAGGTGG +
Preference number: 5 (lower is better)
Translates to: VITITQLSTKESCLYLGFLPCRW*YVSERW
Trigger: CCACCTCTCAGACACATACAACCATCTGCAGGGTAG...AAACCCTAAGTAGAGACAGCTTTCTTTGGTGCTGAGCTGTGTGATTGTGATGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CAA 90 bp AGAAAGCTGTCTCTACTTAGGGTTTGTCTCCCTCTGAATTTACTGACCACTCCTTCCTGGTCCCTCTCCTaGGTGGCAGAAATAGGTTTC +
Preference number: 5 (lower is better)
Translates to: RKLSLLRVCLPLNLLTTPSWSLS*VAEIGF
Trigger: GAAACCTATTTCTGCCACCAAGGAGAGGGACCAGGA...AGGAGTGGTCAGTAAATTCAGAGGGAGACAAACCCTAAGTAGAGACAGCTTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CAA 90 bp CTTCTTTGTAGTGTCTTATTTACCCTATCAGGCTGGGAAGTCCCTGAAGGGAGATTTGGGCACCTTGCTTaGGGAAGTGCTGACTGCAAT +
Preference number: 5 (lower is better)
Translates to: LLCSVLFTLSGWEVPEGRFGHLA*GSADCN
Trigger: ATTGCAGTCAGCACTTCCCAAAGCAAGGTGCCCAAA...TCTCCCTTCAGGGACTTCCCAGCCTGATAGGGTAAATAAGACACTACAAAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CAA 90 bp GGAAAGAGTAAGCTCACTTTAACTCAGATTCCTGGACGTGCTCGGGGCCCAGGCAACATTCTTGTTCTTTaGTCTAGAGAGTTTAGAGGC +
Preference number: 5 (lower is better)
Translates to: GKSKLTLTQIPGRARGPGNILVL*SREFRG
Trigger: GCCTCTAAACTCTCTAGACAAAAGAACAAGAATGTT...GCCTGGGCCCCGAGCACGTCCAGGAATCTGAGTTAAAGTGAGCTTACTCTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405109.5
ENST00000405256.5
CDS GCA 90 bp GCACACTCCATTGATCTTGGCTGGGGTCATACTGCAACAGTTTGTTaGTTAATCGATCAGGTTCTTCATCAGGAAGATCCATCCAGAGCA +
Preference number: 5 (lower is better)
Translates to: AHSIDLGWGHTATVC*LIDQVLHQEDPSRA
Trigger: TGCTCTGGATGGATCTTCCTGATGAAGAACCTGATCGATTAAGCAACAAACTGTTGCAGTATGACCCCAGCCAAGATCAATGGAGTGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343941.4
CDS-3UTR CAA 90 bp GGGAGGGTCATGTTGTTTTTAATTGCAAATACAGAAGTCAGACAAGAAGCACCAAACCTGGCCCTTGTCTaGACCTACACAGCCAATGCC +
Preference number: 5 (lower is better)
Translates to: GRVMLFLIANTEVRQEAPNLALV*TYTANA
Trigger: GGCATTGGCTGTGTAGGTCAAGACAAGGGCCAGGTT...TGGTGCTTCTTGTCTGACTTCTGTATTTGCAATTAAAAACAACATGACCCTCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CAA 90 bp CTAGCATCCAAATTACTTCCTTATTGTGTTTCCTTGCTCAGTGTCAAACAATCCCCTGCATTGGTGGAATaGGTGCGGAGTGAGAGGAGG +
Preference number: 5 (lower is better)
Translates to: LASKLLPYCVSLLSVKQSPALVE*VRSERR
Trigger: CCTCCTCTCACTCCGCACCAATTCCACCAATGCAGG...GGATTGTTTGACACTGAGCAAGGAAACACAATAAGGAAGTAATTTGGATGCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CAA 90 bp TGTTTCCATGAACTCATCATTGACTGCACCCATGGGACCACTTCCTCCTCATCCGCTTCCAAAAGAGCCTaGTGCAATGTGAAACTCTTT +
Preference number: 5 (lower is better)
Translates to: CFHELIIDCTHGTTSSSSASKRA*CNVKLF
Trigger: AAAGAGTTTCACATTGCACAAGGCTCTTTTGGAAGC...GGATGAGGAGGAAGTGGTCCCATGGGTGCAGTCAATGATGAGTTCATGGAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CAA 90 bp GCTTCCAAAAGAGCCTTGTGCAATGTGAAACTCTTTGGAGAAGTTGCTGAAGAAGATCCGAGTAAACCCTaGCTTAACTCTCAGCCGCCA +
Preference number: 5 (lower is better)
Translates to: ASKRALCNVKLFGEVAEEDPSKP*LNSQPP
Trigger: TGGCGGCTGAGAGTTAAGCAAGGGTTTACTCGGATC...TTCTTCAGCAACTTCTCCAAAGAGTTTCACATTGCACAAGGCTCTTTTGGAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CAA 90 bp TTGGTGGCAGAAATAGGTTTCCAACAGGCTCCAGTTTTGGCAAGACCTGCCTGTCTGATTCCTGAAGAATaGTTGCCAATGCAAAGCAGA +
Preference number: 5 (lower is better)
Translates to: LVAEIGFQQAPVLARPACLIPEE*LPMQSR
Trigger: TCTGCTTTGCATTGGCAACAATTCTTCAGGAATCAG...ACAGGCAGGTCTTGCCAAAACTGGAGCCTGTTGGAAACCTATTTCTGCCACCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405109.5
ENST00000405256.5
CDS-3UTR CAA 90 bp TTGTCTCCCTCTGAATTTACTGACCACTCCTGCTTCCAAAAGAGCCTTGTGCAAGACACCCTTTTCCAATaGTCCCGTTCTACAGAGTAC +
Preference number: 5 (lower is better)
Translates to: LSPSEFTDHSCFQKSLVQDTLFQ*SRSTEY
Trigger: GTACTCTGTAGAACGGGACAATTGGAAAAGGGTGTC...TTGCACAAGGCTCTTTTGGAAGCAGGAGTGGTCAGTAAATTCAGAGGGAGACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CAA 90 bp GTCATCACAATCACACAGCTCAGCACCAAAGAAAGCTGTCTCTACTTAGGGTTTGATGTCAGGAAACATTaGAAGGTGCTGCCTGGTTCG +
Preference number: 5 (lower is better)
Translates to: VITITQLSTKESCLYLGFDVRKH*KVLPGS
Trigger: CGAACCAGGCAGCACCTTCAAATGTTTCCTGACATC...AAACCCTAAGTAGAGACAGCTTTCTTTGGTGCTGAGCTGTGTGATTGTGATGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405109.5
CDS-3UTR CAA 90 bp ATGAACTCATCATTGACTGCACCCATGGGACCACTTCCTCCTCATCCTTTTGGGTCTTTTCCCTCAATCTaGCACTCCATGATCTACTCT +
Preference number: 5 (lower is better)
Translates to: MNSSLTAPMGPLPPHPFGSFPSI*HSMIYS
Trigger: AGAGTAGATCATGGAGTGCAAGATTGAGGGAAAAGA...CCCAAAAGGATGAGGAGGAAGTGGTCCCATGGGTGCAGTCAATGATGAGTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405109.5
CDS-3UTR CAA 90 bp ATGAACTCATCATTGACTGCACCCATGGGACCACTTCCTCCTCATCCTTTTGGGAGTTCCAATATTTCTTaGGAGATAACCTCATGGCGA +
Preference number: 5 (lower is better)
Translates to: MNSSLTAPMGPLPPHPFGSSNIS*EITSWR
Trigger: TCGCCATGAGGTTATCTCCAAAGAAATATTGGAACT...CCCAAAAGGATGAGGAGGAAGTGGTCCCATGGGTGCAGTCAATGATGAGTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CAA 90 bp GCTTCCAAAAGAGCCTTGTGCAATGTGAAACTCTTTGGAGAAGTTGCTGAAGAATCCATGAACTCATCATaGACTGCACCCATGGGACCA +
Preference number: 5 (lower is better)
Translates to: ASKRALCNVKLFGEVAEESMNSS*TAPMGP
Trigger: TGGTCCCATGGGTGCAGTCAATGATGAGTTCATGGA...TTCTTCAGCAACTTCTCCAAAGAGTTTCACATTGCACAAGGCTCTTTTGGAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CAA 90 bp TGTTTCCATGAACTCATCATTGACTGCACCCATGGGACCACTTCCTCCTCATCCAACTCTTTGGAGAAGTaGCTGAAGAAGAGCTATGAA +
Preference number: 5 (lower is better)
Translates to: CFHELIIDCTHGTTSSSSNSLEK*LKKSYE
Trigger: TTCATAGCTCTTCTTCAGCAACTTCTCCAAAGAGTT...GGATGAGGAGGAAGTGGTCCCATGGGTGCAGTCAATGATGAGTTCATGGAAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CAA 90 bp TTTGGGAGTGACTGTCTTCTGATTATGCTCAATTGTGGGCTGAAGTGGGTGGCTGCTTCCAAAAGAGCCTaGTGCAATGTGAAACTCTTT +
Preference number: 5 (lower is better)
Translates to: FGSDCLLIMLNCGLKWVAASKRA*CNVKLF
Trigger: AAAGAGTTTCACATTGCACAAGGCTCTTTTGGAAGC...AGCCACCCACTTCAGCCCACAATTGAGCATAATCAGAAGACAGTCACTCCCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CAA 90 bp TTGGTGGCAGAAATAGGTTTCCAACAGGCTCCAGTTTTGGCAAGACCTGCCTGTTTTAGAAAGGTCATCTaGCCCAAGTTCACATGGTTA +
Preference number: 5 (lower is better)
Translates to: LVAEIGFQQAPVLARPACFRKVI*PKFTWL
Trigger: TAACCATGTGAACTTGGGCAAGATGACCTTTCTAAA...ACAGGCAGGTCTTGCCAAAACTGGAGCCTGTTGGAAACCTATTTCTGCCACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CAA 90 bp GCTTCCAAAAGAGCCTTGTGCAATGTGAAACTCTTTGGAGAAGTTGCTGAAGAATTTGGGCACCTTGCTTaGGGAAGTGCTGACTGCAAT +
Preference number: 5 (lower is better)
Translates to: ASKRALCNVKLFGEVAEEFGHLA*GSADCN
Trigger: ATTGCAGTCAGCACTTCCCAAAGCAAGGTGCCCAAA...TTCTTCAGCAACTTCTCCAAAGAGTTTCACATTGCACAAGGCTCTTTTGGAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CAA 90 bp CATCTGAAATCTGTGAAGCACCGGTTTCGACCTCGGGGATTCCTCAGAAGAAGTGTGGGGAGGGTCATGTaGTTTTTAATTGCAAATACA +
Preference number: 5 (lower is better)
Translates to: HLKSVKHRFRPRGFLRRSVGRVM*FLIANT
Trigger: TGTATTTGCAATTAAAAACAACATGACCCTCCCCAC...ACTTCTTCTGAGGAATCCCCGAGGTCGAAACCGGTGCTTCACAGATTTCAGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CAA 90 bp TTTGGGAGTGACTGTCTTCTGATTATGCTCAATTGTGGGCTGAAGTGGGTGGCTCCTTATTGTGTTTCCTaGCTCAGTGTCAAACAATCC +
Preference number: 5 (lower is better)
Translates to: FGSDCLLIMLNCGLKWVAPYCVS*LSVKQS
Trigger: GGATTGTTTGACACTGAGCAAGGAAACACAATAAGG...AGCCACCCACTTCAGCCCACAATTGAGCATAATCAGAAGACAGTCACTCCCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CAA 90 bp AAGCCATATGCACATCTGCCCCACTTCCCTAAAGCACTGAGTCTGTTTTGGGCAGCTACAGTCTGTACATaGGCATTATTGATCTCCAAA +
Preference number: 5 (lower is better)
Translates to: KPYAHLPHFPKALSLFWAATVCT*ALLISK
Trigger: TTTGGAGATCAATAATGCCAATGTACAGACTGTAGC...TGCCCAAAACAGACTCAGTGCTTTAGGGAAGTGGGGCAGATGTGCATATGGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405109.5
ENST00000405256.5
CDS-3UTR CAA 90 bp CTTCTTTGTAGTGTCTTATTTACCCTATCAGGCTGGGAAGTCCCTGAAGGGAGATGCTGTTGGGGTGTCTaGATGGCTTTGAATGCATTT +
Preference number: 5 (lower is better)
Translates to: LLCSVLFTLSGWEVPEGRCCWGV*MALNAF
Trigger: AAATGCATTCAAAGCCATCAAGACACCCCAACAGCA...TCTCCCTTCAGGGACTTCCCAGCCTGATAGGGTAAATAAGACACTACAAAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405109.5
ENST00000405256.5
CDS-3UTR CAA 90 bp TTTGGGAGTGACTGTCTTCTGATTATGCTCAATTGTGGGCTGAAGTGGGTGGCTCTGATTCCTGAAGAATaGTTGCCAATGCAAAGCAGA +
Preference number: 5 (lower is better)
Translates to: FGSDCLLIMLNCGLKWVALIPEE*LPMQSR
Trigger: TCTGCTTTGCATTGGCAACAATTCTTCAGGAATCAG...AGCCACCCACTTCAGCCCACAATTGAGCATAATCAGAAGACAGTCACTCCCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405109.5
ENST00000405256.5
CDS-3UTR CAA 90 bp TTTGGGAGTGACTGTCTTCTGATTATGCTCAATTGTGGGCTGAAGTGGGTGGCTTACTGCAACAGTTTGTaGCTTAATCGATCAGGTTCT +
Preference number: 5 (lower is better)
Translates to: FGSDCLLIMLNCGLKWVAYCNSL*LNRSGS
Trigger: AGAACCTGATCGATTAAGCAACAAACTGTTGCAGTA...AGCCACCCACTTCAGCCCACAATTGAGCATAATCAGAAGACAGTCACTCCCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CAA 90 bp GCTTCCAAAAGAGCCTTGTGCAATGTGAAACTCTTTGGAGAAGTTGCTGAAGAAATGAAGATGCCCTCATaGAATCCACTGTGCTTCCAG +
Preference number: 5 (lower is better)
Translates to: ASKRALCNVKLFGEVAEEMKMPS*NPLCFQ
Trigger: CTGGAAGCACAGTGGATTCAATGAGGGCATCTTCAT...TTCTTCAGCAACTTCTCCAAAGAGTTTCACATTGCACAAGGCTCTTTTGGAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CAA 90 bp ATGAACTCATCATTGACTGCACCCATGGGACCACTTCCTCCTCATCCTTTTGGGCAGGCAAGCAATCTGTaGTATGGAATCAAAGAAAAA +
Preference number: 5 (lower is better)
Translates to: MNSSLTAPMGPLPPHPFGQASNL*YGIKEK
Trigger: TTTTTCTTTGATTCCATACAACAGATTGCTTGCCTG...CCCAAAAGGATGAGGAGGAAGTGGTCCCATGGGTGCAGTCAATGATGAGTTCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CAA 90 bp ATGAACTCATCATTGACTGCACCCATGGGACCACTTCCTCCTCATCCTTTTGGGCAAATTACTTCCTTATaGTGTTTCCTTGCTCAGTGT +
Preference number: 5 (lower is better)
Translates to: MNSSLTAPMGPLPPHPFGQITSL*CFLAQC
Trigger: ACACTGAGCAAGGAAACACAATAAGGAAGTAATTTG...CCCAAAAGGATGAGGAGGAAGTGGTCCCATGGGTGCAGTCAATGATGAGTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CAA 90 bp TGTTTCCATGAACTCATCATTGACTGCACCCATGGGACCACTTCCTCCTCATCCTCAAATGTGAAACATTaGCTCATTATGAAGTCAGGG +
Preference number: 5 (lower is better)
Translates to: CFHELIIDCTHGTTSSSSSNVKH*LIMKSG
Trigger: CCCTGACTTCATAATGAGCAAATGTTTCACATTTGA...GGATGAGGAGGAAGTGGTCCCATGGGTGCAGTCAATGATGAGTTCATGGAAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CAA 90 bp GTCATCACAATCACACAGCTCAGCACCAAAGAAAGCTGTCTCTACTTAGGGTTTCATCACACAGAAGCATaGTGTTCCTTCTTAGGGCTT +
Preference number: 5 (lower is better)
Translates to: VITITQLSTKESCLYLGFHHTEA*CSFLGL
Trigger: AAGCCCTAAGAAGGAACACAATGCTTCTGTGTGATG...AAACCCTAAGTAGAGACAGCTTTCTTTGGTGCTGAGCTGTGTGATTGTGATGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405109.5
ENST00000405256.5
CDS-3UTR CAA 90 bp TTTGGGAGTGACTGTCTTCTGATTATGCTCAATTGTGGGCTGAAGTGGGTGGCTTTCTTTAAGTGTAGCTaGATTCCTGAGGGGCTATTT +
Preference number: 5 (lower is better)
Translates to: FGSDCLLIMLNCGLKWVAFFKCS*IPEGLF
Trigger: AAATAGCCCCTCAGGAATCAAGCTACACTTAAAGAA...AGCCACCCACTTCAGCCCACAATTGAGCATAATCAGAAGACAGTCACTCCCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405109.5
CDS TCA 90 bp CAGCCAGGACCAGTCTGTGGCAAGGAAATTTCTCTCCTTCTGCTGTaGGTACCACATCAATCATTTCTGCTAATTCTTTCATGTTCTGAA +
Preference number: 5 (lower is better)
Translates to: QPGPVCGKEISLLLL*VPHQSFLLILSCSE
Trigger: TTCAGAACATGAAAGAATTAGCAGAAATGATTGATGTGGTACTCACAGCAGAAGGAGAGAAATTTCCTTGCCACAGACTGGTCCTGGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405109.5
ENST00000405256.5
ENST00000497045.1
CDS-3UTR CAA 90 bp CTTCTTTGTAGTGTCTTATTTACCCTATCAGGCTGGGAAGTCCCTGAAGGGAGATCATACTGCAACAGTTaGTTGCTTAATCGATCAGGT +
Preference number: 5 (lower is better)
Translates to: LLCSVLFTLSGWEVPEGRSYCNS*LLNRSG
Trigger: ACCTGATCGATTAAGCAACAAACTGTTGCAGTATGA...TCTCCCTTCAGGGACTTCCCAGCCTGATAGGGTAAATAAGACACTACAAAGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CAA 90 bp CTTCTTTGTAGTGTCTTATTTACCCTATCAGGCTGGGAAGTCCCTGAAGGGAGAAACTCTTTGGAGAAGTaGCTGAAGAAGAGCTATGAA +
Preference number: 5 (lower is better)
Translates to: LLCSVLFTLSGWEVPEGRNSLEK*LKKSYE
Trigger: TTCATAGCTCTTCTTCAGCAACTTCTCCAAAGAGTT...TCTCCCTTCAGGGACTTCCCAGCCTGATAGGGTAAATAAGACACTACAAAGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CAA 90 bp TTGTCTCCCTCTGAATTTACTGACCACTCCTGCTTCCAAAAGAGCCTTGTGCAAGTGGGGAGGGTCATGTaGTTTTTAATTGCAAATACA +
Preference number: 5 (lower is better)
Translates to: LSPSEFTDHSCFQKSLVQVGRVM*FLIANT
Trigger: TGTATTTGCAATTAAAAACAACATGACCCTCCCCAC...TTGCACAAGGCTCTTTTGGAAGCAGGAGTGGTCAGTAAATTCAGAGGGAGACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CAA 90 bp TTGTCTCCCTCTGAATTTACTGACCACTCCTGCTTCCAAAAGAGCCTTGTGCAAAAGTTCCAATCTGACTaGCTTCAAAAGCTCAACAAG +
Preference number: 5 (lower is better)
Translates to: LSPSEFTDHSCFQKSLVQKFQSD*LQKLNK
Trigger: CTTGTTGAGCTTTTGAAGCAAGTCAGATTGGAACTT...TTGCACAAGGCTCTTTTGGAAGCAGGAGTGGTCAGTAAATTCAGAGGGAGACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000405109.5
ENST00000405256.5
CDS-3UTR CAA 90 bp GGGAGGGTCATGTTGTTTTTAATTGCAAATACAGAAGTCAGACAAGAAGCACCAGACACCCTTTTCCAATaGTCCCGTTCTACAGAGTAC +
Preference number: 5 (lower is better)
Translates to: GRVMLFLIANTEVRQEAPDTLFQ*SRSTEY
Trigger: GTACTCTGTAGAACGGGACAATTGGAAAAGGGTGTC...TGGTGCTTCTTGTCTGACTTCTGTATTTGCAATTAAAAACAACATGACCCTCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS GCA 90 bp TCCAATTACATAAAGTTTATTATTCACTGTCACTACAGCATGACATaGCAATTGCAGTGGAAGGGGAGACACCCTTTTCCAATTGTCCCG +
Preference number: 5 (lower is better)
Translates to: SNYIKFIIHCHYSMT*QLQWKGRHPFPIVP
Trigger: CGGGACAATTGGAAAAGGGTGTCTCCCCTTCCACTGCAATTGGCATGTCATGCTGTAGTGACAGTGAATAATAAACTTTATGTAATTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
ENST00000497045.1
CDS GCA 90 bp GCACACTCCATTGATCTTGGCTGGGGTCATACTGCAACAGTTTGTTaGTTAATCGATCAGGTTCTTCATCAGGAAGATCCATCTATAAAT +
Preference number: 5 (lower is better)
Translates to: AHSIDLGWGHTATVC*LIDQVLHQEDPSIN
Trigger: ATTTATAGATGGATCTTCCTGATGAAGAACCTGATCGATTAAGCAACAAACTGTTGCAGTATGACCCCAGCCAAGATCAATGGAGTGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492025.1
CDS-3UTR CAA 90 bp AGAAAGCTGTCTCTACTTAGGGTTTGTCTCCCTCTGAATTTACTGACCACTCCTTACTGCAACAGTTTGTaGCTTAATCGATCAGGTTCT +
Preference number: 5 (lower is better)
Translates to: RKLSLLRVCLPLNLLTTPYCNSL*LNRSGS
Trigger: AGAACCTGATCGATTAAGCAACAAACTGTTGCAGTA...AGGAGTGGTCAGTAAATTCAGAGGGAGACAAACCCTAAGTAGAGACAGCTTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CAA 90 bp CTAGCATCCAAATTACTTCCTTATTGTGTTTCCTTGCTCAGTGTCAAACAATCCTCATGCATGAGGACGTaGATGGCTACAACATTCCAC +
Preference number: 5 (lower is better)
Translates to: LASKLLPYCVSLLSVKQSSCMRT*MATTFH
Trigger: GTGGAATGTTGTAGCCATCAACGTCCTCATGCATGA...GGATTGTTTGACACTGAGCAAGGAAACACAATAAGGAAGTAATTTGGATGCTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CAA 90 bp AGAAAGCTGTCTCTACTTAGGGTTTGTCTCCCTCTGAATTTACTGACCACTCCTAACTCTTTGGAGAAGTaGCTGAAGAAGAGCTATGAA +
Preference number: 5 (lower is better)
Translates to: RKLSLLRVCLPLNLLTTPNSLEK*LKKSYE
Trigger: TTCATAGCTCTTCTTCAGCAACTTCTCCAAAGAGTT...AGGAGTGGTCAGTAAATTCAGAGGGAGACAAACCCTAAGTAGAGACAGCTTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CAA 90 bp AGAAAGCTGTCTCTACTTAGGGTTTGTCTCCCTCTGAATTTACTGACCACTCCTTTTAGAAAGGTCATCTaGCCCAAGTTCACATGGTTA +
Preference number: 5 (lower is better)
Translates to: RKLSLLRVCLPLNLLTTPFRKVI*PKFTWL
Trigger: TAACCATGTGAACTTGGGCAAGATGACCTTTCTAAA...AGGAGTGGTCAGTAAATTCAGAGGGAGACAAACCCTAAGTAGAGACAGCTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CAA 90 bp AGAAAGCTGTCTCTACTTAGGGTTTGTCTCCCTCTGAATTTACTGACCACTCCTGTGGGGAGGGTCATGTaGTTTTTAATTGCAAATACA +
Preference number: 5 (lower is better)
Translates to: RKLSLLRVCLPLNLLTTPVGRVM*FLIANT
Trigger: TGTATTTGCAATTAAAAACAACATGACCCTCCCCAC...AGGAGTGGTCAGTAAATTCAGAGGGAGACAAACCCTAAGTAGAGACAGCTTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CAA 90 bp GCTTCCAAAAGAGCCTTGTGCAATGTGAAACTCTTTGGAGAAGTTGCTGAAGAACCTTATTGTGTTTCCTaGCTCAGTGTCAAACAATCC +
Preference number: 5 (lower is better)
Translates to: ASKRALCNVKLFGEVAEEPYCVS*LSVKQS
Trigger: GGATTGTTTGACACTGAGCAAGGAAACACAATAAGG...TTCTTCAGCAACTTCTCCAAAGAGTTTCACATTGCACAAGGCTCTTTTGGAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CAA 90 bp GGGAGGGTCATGTTGTTTTTAATTGCAAATACAGAAGTCAGACAAGAAGCACCATGCTGTTGGGGTGTCTaGATGGCTTTGAATGCATTT +
Preference number: 5 (lower is better)
Translates to: GRVMLFLIANTEVRQEAPCCWGV*MALNAF
Trigger: AAATGCATTCAAAGCCATCAAGACACCCCAACAGCA...TGGTGCTTCTTGTCTGACTTCTGTATTTGCAATTAAAAACAACATGACCCTCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000405109.5
ENST00000405256.5
CDS-3UTR CAA 90 bp GCTTCCAAAAGAGCCTTGTGCAATGTGAAACTCTTTGGAGAAGTTGCTGAAGAAAGTTCCAATATTTCTTaGGAGATAACCTCATGGCGA +
Preference number: 5 (lower is better)
Translates to: ASKRALCNVKLFGEVAEESSNIS*EITSWR
Trigger: TCGCCATGAGGTTATCTCCAAAGAAATATTGGAACT...TTCTTCAGCAACTTCTCCAAAGAGTTTCACATTGCACAAGGCTCTTTTGGAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CAA 90 bp GGGAGGGTCATGTTGTTTTTAATTGCAAATACAGAAGTCAGACAAGAAGCACCACCTTATTGTGTTTCCTaGCTCAGTGTCAAACAATCC +
Preference number: 5 (lower is better)
Translates to: GRVMLFLIANTEVRQEAPPYCVS*LSVKQS
Trigger: GGATTGTTTGACACTGAGCAAGGAAACACAATAAGG...TGGTGCTTCTTGTCTGACTTCTGTATTTGCAATTAAAAACAACATGACCCTCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CAA 90 bp AGAAAGCTGTCTCTACTTAGGGTTTGTCTCCCTCTGAATTTACTGACCACTCCTTCAAATGTGAAACATTaGCTCATTATGAAGTCAGGG +
Preference number: 5 (lower is better)
Translates to: RKLSLLRVCLPLNLLTTPSNVKH*LIMKSG
Trigger: CCCTGACTTCATAATGAGCAAATGTTTCACATTTGA...AGGAGTGGTCAGTAAATTCAGAGGGAGACAAACCCTAAGTAGAGACAGCTTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS TCA 90 bp TGCTTCAAAAGCTCAACAAGATGCACTGTACGCAATTCTTTGTTATaGTTTACCCATCTCAGAACTAAGTCCAGAATGCTCTCTTCTCTG +
Preference number: 5 (lower is better)
Translates to: CFKSSTRCTVRNSLL*FTHLRTKSRMLSSL
Trigger: CAGAGAAGAGAGCATTCTGGACTTAGTTCTGAGATGGGTAAATCATAACAAAGAATTGCGTACAGTGCATCTTGTTGAGCTTTTGAAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405109.5
ENST00000405256.5
ENST00000497045.1
CDS-3UTR CAA 90 bp GTACTGCAACAGCCTTCTATTAAAGTGAAAACAGGAGTGATAGGAATATATTTCATGAAGATGCCCTCATaGAATCCACTGTGCTTCCAG +
Preference number: 5 (lower is better)
Translates to: VLQQPSIKVKTGVIGIYFMKMPS*NPLCFQ
Trigger: CTGGAAGCACAGTGGATTCAATGAGGGCATCTTCAT...GAAATATATTCCTATCACTCCTGTTTTCACTTTAATAGAAGGCTGTTGCAGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CAA 90 bp GCTTCCAAAAGAGCCTTGTGCAATGTGAAACTCTTTGGAGAAGTTGCTGAAGAACAGGCAAGCAATCTGTaGTATGGAATCAAAGAAAAA +
Preference number: 5 (lower is better)
Translates to: ASKRALCNVKLFGEVAEEQASNL*YGIKEK
Trigger: TTTTTCTTTGATTCCATACAACAGATTGCTTGCCTG...TTCTTCAGCAACTTCTCCAAAGAGTTTCACATTGCACAAGGCTCTTTTGGAAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CAA 90 bp CTAGCATCCAAATTACTTCCTTATTGTGTTTCCTTGCTCAGTGTCAAACAATCCAGTTCCAATATTTCTTaGGAGATAACCTCATGGCGA +
Preference number: 5 (lower is better)
Translates to: LASKLLPYCVSLLSVKQSSSNIS*EITSWR
Trigger: TCGCCATGAGGTTATCTCCAAAGAAATATTGGAACT...GGATTGTTTGACACTGAGCAAGGAAACACAATAAGGAAGTAATTTGGATGCTAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CAA 90 bp CTAGCATCCAAATTACTTCCTTATTGTGTTTCCTTGCTCAGTGTCAAACAATCCTTTAGAAAGGTCATCTaGCCCAAGTTCACATGGTTA +
Preference number: 5 (lower is better)
Translates to: LASKLLPYCVSLLSVKQSFRKVI*PKFTWL
Trigger: TAACCATGTGAACTTGGGCAAGATGACCTTTCTAAA...GGATTGTTTGACACTGAGCAAGGAAACACAATAAGGAAGTAATTTGGATGCTAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CAA 90 bp GGGAGGGTCATGTTGTTTTTAATTGCAAATACAGAAGTCAGACAAGAAGCACCACAGGCAAGCAATCTGTaGTATGGAATCAAAGAAAAA +
Preference number: 5 (lower is better)
Translates to: GRVMLFLIANTEVRQEAPQASNL*YGIKEK
Trigger: TTTTTCTTTGATTCCATACAACAGATTGCTTGCCTG...TGGTGCTTCTTGTCTGACTTCTGTATTTGCAATTAAAAACAACATGACCCTCCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS-3UTR CAA 90 bp CTAGCATCCAAATTACTTCCTTATTGTGTTTCCTTGCTCAGTGTCAAACAATCCGCTACAGTCTGTACATaGGCATTATTGATCTCCAAA +
Preference number: 5 (lower is better)
Translates to: LASKLLPYCVSLLSVKQSATVCT*ALLISK
Trigger: TTTGGAGATCAATAATGCCAATGTACAGACTGTAGC...GGATTGTTTGACACTGAGCAAGGAAACACAATAAGGAAGTAATTTGGATGCTAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405109.5
ENST00000405256.5
CDS-3UTR CAA 90 bp GGGAGGGTCATGTTGTTTTTAATTGCAAATACAGAAGTCAGACAAGAAGCACCAAACATTCTTGTTCTTTaGTCTAGAGAGTTTAGAGGC +
Preference number: 5 (lower is better)
Translates to: GRVMLFLIANTEVRQEAPNILVL*SREFRG
Trigger: GCCTCTAAACTCTCTAGACAAAAGAACAAGAATGTT...TGGTGCTTCTTGTCTGACTTCTGTATTTGCAATTAAAAACAACATGACCCTCCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405109.5
ENST00000405256.5
CDS TCA 90 bp TCGATTTCTAGTATTTCTTCATGTAAGCTCACCTCGGCAAAGTGCTaGTATAAATATTTCTTTGATCGATCAGATAAATCTTCAGCTCCA +
Preference number: 5 (lower is better)
Translates to: SISSISSCKLTSAKC*YKYFFDRSDKSSAP
Trigger: TGGAGCTGAAGATTTATCTGATCGATCAAAGAAATATTTATATCAGCACTTTGCCGAGGTGAGCTTACATGAAGAAATACTAGAAATCGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405109.5
ENST00000405256.5
ENST00000497045.1
CDS GCA 90 bp AATTTCAACATTCTTGTTCTTTTGTCTAGAGAGTTTAGAGGCACTTaGTTCTCCAGCCACAATTATAGTATTATTTTCCATGACAACACC +
Preference number: 5 (lower is better)
Translates to: NFNILVLLSREFRGT*FSSHNYSIIFHDNT
Trigger: GGTGTTGTCATGGAAAATAATACTATAATTGTGGCTGGAGAAGCAAGTGCCTCTAAACTCTCTAGACAAAAGAACAAGAATGTTGAAATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405109.5
ENST00000405256.5
ENST00000497045.1
CDS-3UTR CAA 90 bp GTACTGCAACAGCCTTCTATTAAAGTGAAAACAGGAGTGATAGGAATATATTTCTCAAATGTGAAACATTaGCTCATTATGAAGTCAGGG +
Preference number: 5 (lower is better)
Translates to: VLQQPSIKVKTGVIGIYFSNVKH*LIMKSG
Trigger: CCCTGACTTCATAATGAGCAAATGTTTCACATTTGA...GAAATATATTCCTATCACTCCTGTTTTCACTTTAATAGAAGGCTGTTGCAGTAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
CDS CAA 72 bp CGGGGCGCGTCCCCACTCGCTGGGCCACGACCTGGCTaGGACGCTACCGTGTGGCAGGGCGGCCAGCGGGCC +
Preference number: 6 (lower is better)
Translates to: RGASPLAGPRPG*DATVWQGGQRA
Trigger: GGCCCGCTGGCCGCCCTGCCACACGGTAGCGTCCAAGCCAGGTCGTGGCCCAGCGAGTGGGGACGCGCCCCG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405109.5
ENST00000407609.7
ENST00000476626.5
CDS CCA 72 bp GGGGCGCGTCCCCACTCGCTGGGCCACGACCTGGCTTaGACGCTACCGTGTGGCAGGGCGGCCAGCGGGCCT +
Preference number: 6 (lower is better)
Translates to: GARPHSLGHDLA*TLPCGRAASGP
Trigger: AGGCCCGCTGGCCGCCCTGCCACACGGTAGCGTCCAAGCCAGGTCGTGGCCCAGCGAGTGGGGACGCGCCCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405109.5
ENST00000407609.7
ENST00000476626.5
CDS CCA 72 bp GGTTCGGGGCGCGTCCCCACTCGCTGGGCCACGACCTaGCTTGGACGCTACCGTGTGGCAGGGCGGCCAGCG +
Preference number: 6 (lower is better)
Translates to: GSGRVPTRWATT*LGRYRVAGRPA
Trigger: CGCTGGCCGCCCTGCCACACGGTAGCGTCCAAGCCAGGTCGTGGCCCAGCGAGTGGGGACGCGCCCCGAACC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405109.5
ENST00000407609.7
ENST00000476626.5
CDS GCA 72 bp GGAGGGCGCTGGCAGCGCCTCCGAGGGGACAGGTGCTaGCCTCTGCTTGGAAGTGGCCCGAGACCACGCCGC +
Preference number: 6 (lower is better)
Translates to: GGRWQRLRGDRC*PLLGSGPRPRR
Trigger: GCGGCGTGGTCTCGGGCCACTTCCAAGCAGAGGGCAGCACCTGTCCCCTCGGAGGCGCTGCCAGCGCCCTCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405109.5
CDS GCA 72 bp GACCACGCCGCCGCTGCCCTCCAGCCACTGTGCGCCTaGGCACCTATTCCCGCGCTGGTTCCAGACGGCGAC +
Preference number: 6 (lower is better)
Translates to: DHAAAALQPLCA*APIPALVPDGD
Trigger: GTCGCCGTCTGGAACCAGCGCGGGAATAGGTGCGCAGGCGCACAGTGGCTGGAGGGCAGCGGCGGCGTGGTC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405109.5
CDS GCA 72 bp GCCCGAGACCACGCCGCCGCTGCCCTCCAGCCACTGTaGGCCTGCGCACCTATTCCCGCGCTGGTTCCAGAC +
Preference number: 6 (lower is better)
Translates to: ARDHAAAALQPL*ACAPIPALVPD
Trigger: GTCTGGAACCAGCGCGGGAATAGGTGCGCAGGCGCACAGTGGCTGGAGGGCAGCGGCGGCGTGGTCTCGGGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405109.5
CDS GCA 72 bp GAGGGAGGGCGCTGGCAGCGCCTCCGAGGGGACAGGTaGTGCCCTCTGCTTGGAAGTGGCCCGAGACCACGC +
Preference number: 6 (lower is better)
Translates to: EGGRWQRLRGDR*CPLLGSGPRPR
Trigger: GCGTGGTCTCGGGCCACTTCCAAGCAGAGGGCAGCACCTGTCCCCTCGGAGGCGCTGCCAGCGCCCTCCCTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405109.5
CDS GCA 72 bp GCTGGTTCCAGACGGCGACTACAGCCCCGGTGTCGCTaGACAGGGTCTCCCCGCGCGCGTCCCGTACCCTAC +
Preference number: 6 (lower is better)
Translates to: AGSRRRLQPRCR*TGSPRARPVPY
Trigger: GTAGGGTACGGGACGCGCGCGGGGAGACCCTGTGCAGCGACACCGGGGCTGTAGTCGCCGTCTGGAACCAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405109.5
CDS TCA 72 bp ACGCTACCGTGTGGCAGGGCGGCCAGCGGGCCTGACTaGGGCCACTGCCCAATATGGGCCTGTGCTGGCTGG +
Preference number: 6 (lower is better)
Translates to: TLPCGRAASGPD*GHCPIWACAGW
Trigger: CCAGCCAGCACAGGCCCATATTGGGCAGTGGCCTCAGTCAGGCCCGCTGGCCGCCCTGCCACACGGTAGCGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405109.5
CDS GCA 72 bp CCTCTGCTTGGAAGTGGCCCGAGACCACGCCGCCGCTaGCCTCCAGCCACTGTGCGCCTGCGCACCTATTCC +
Preference number: 6 (lower is better)
Translates to: PLLGSGPRPRRR*PPATVRLRTYS
Trigger: GGAATAGGTGCGCAGGCGCACAGTGGCTGGAGGGCAGCGGCGGCGTGGTCTCGGGCCACTTCCAAGCAGAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405109.5
CDS CCA 72 bp TCCAGCCACTGTGCGCCTGCGCACCTATTCCCGCGCTaGTTCCAGACGGCGACTACAGCCCCGGTGTCGCTG +
Preference number: 6 (lower is better)
Translates to: SSHCAPAHLFPR*FQTATTAPVSL
Trigger: CAGCGACACCGGGGCTGTAGTCGCCGTCTGGAACCAGCGCGGGAATAGGTGCGCAGGCGCACAGTGGCTGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405109.5
CDS CCA 72 bp CTTGACCTACACAGCCAATGCCACGAAGGTGCTGCCTaGTTCGGGGCGCGTCCCCACTCGCTGGGCCACGAC +
Preference number: 6 (lower is better)
Translates to: LDLHSQCHEGAA*FGARPHSLGHD
Trigger: GTCGTGGCCCAGCGAGTGGGGACGCGCCCCGAACCAGGCAGCACCTTCGTGGCATTGGCTGTGTAGGTCAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476626.5
CDS CCA 72 bp CTACAAAGATGTCAGGAAACATTTGAAGGTGCTGCCTaGTTCGGGGCGCGTCCCCACTCGCTGGGCCACGAC +
Preference number: 6 (lower is better)
Translates to: LQRCQETFEGAA*FGARPHSLGHD
Trigger: GTCGTGGCCCAGCGAGTGGGGACGCGCCCCGAACCAGGCAGCACCTTCAAATGTTTCCTGACATCTTTGTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405109.5
CDS CAA 90 bp GTAGATCTCCACCACGTCAAGGCATTTTCGAACCTGGCCCTTGTCTaGACCTACACAGCCAATGCCACGAAGGTGCTGCCTGGTTCGGGG +
Preference number: 6 (lower is better)
Translates to: VDLHHVKAFSNLALV*TYTANATKVLPGSG
Trigger: CCCCGAACCAGGCAGCACCTTCGTGGCATTGGCTGTGTAGGTCAAGACAAGGGCCAGGTTCGAAAATGCCTTGACGTGGTGGAGATCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476626.5
CDS CCA 72 bp CGCAGACATAGAGTTTCCCATCCACTGCCCCTGCATTaGTGGAATTGGTGCGGAGTGAGAGGAGGGGACTTG +
Preference number: 6 (lower is better)
Translates to: RRHRVSHPLPLH*WNWCGVRGGDL
Trigger: CAAGTCCCCTCCTCTCACTCCGCACCAATTCCACCAATGCAGGGGCAGTGGATGGGAAACTCTATGTCTGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
ENST00000476626.5
ENST00000492025.1
CDS TCA 72 bp ACCACGTCAAGGCATTTTCGAACCTGGCCCTTGTCTTaGCCTACACAGCCAATGCCACGAAGGTGCTGCCTG +
Preference number: 6 (lower is better)
Translates to: TTSRHFRTWPLS*PTQPMPRRCCL
Trigger: CAGGCAGCACCTTCGTGGCATTGGCTGTGTAGGTCAAGACAAGGGCCAGGTTCGAAAATGCCTTGACGTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476626.5
CDS CCA 72 bp AGACATAGAGTTTCCCATCCACTGCCCCTGCATTGGTaGAATTGGTGCGGAGTGAGAGGAGGGGACTTGGCA +
Preference number: 6 (lower is better)
Translates to: RHRVSHPLPLHW*NWCGVRGGDLA
Trigger: TGCCAAGTCCCCTCCTCTCACTCCGCACCAATTCCACCAATGCAGGGGCAGTGGATGGGAAACTCTATGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
ENST00000476626.5
ENST00000492025.1
CDS CAA 72 bp CACCACGTCAAGGCATTTTCGAACCTGGCCCTTGTCTaGACCTACACAGCCAATGCCACGAAGGTGCTGCCT +
Preference number: 6 (lower is better)
Translates to: HHVKAFSNLALV*TYTANATKVLP
Trigger: AGGCAGCACCTTCGTGGCATTGGCTGTGTAGGTCAAGACAAGGGCCAGGTTCGAAAATGCCTTGACGTGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476626.5
CDS GCA 72 bp AGCTGTACTGAATCGGTACTTAGAGTACTTCATGGGTaGCCGCACACTCCATTGATCTTGGCTGGGGTCATA +
Preference number: 6 (lower is better)
Translates to: SCTESVLRVLHG*PHTPLILAGVI
Trigger: TATGACCCCAGCCAAGATCAATGGAGTGTGCGGGCACCCATGAAGTACTCTAAGTACCGATTCAGTACAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
ENST00000492025.1
CDS TCA 72 bp TACTTAGAGTACTTCATGGGTGCCCGCACACTCCATTaGTCTTGGCTGGGGTCATACTGCAACAGTTTGTTG +
Preference number: 6 (lower is better)
Translates to: YLEYFMGARTLH*SWLGSYCNSLL
Trigger: CAACAAACTGTTGCAGTATGACCCCAGCCAAGATCAATGGAGTGTGCGGGCACCCATGAAGTACTCTAAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
ENST00000492025.1
CDS CCA 72 bp ACTTCATGGGTGCCCGCACACTCCATTGATCTTGGCTaGGGTCATACTGCAACAGTTTGTTGCTTAATCGAT +
Preference number: 6 (lower is better)
Translates to: TSWVPAHSIDLG*GHTATVCCLID
Trigger: ATCGATTAAGCAACAAACTGTTGCAGTATGACCCCAGCCAAGATCAATGGAGTGTGCGGGCACCCATGAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
ENST00000492025.1
CDS CCA 72 bp ATTCACTGTCACTACAGCATGACATGCCAATTGCAGTaGAAGGGGAGACACCCTTTTCCAATTGTCCCGTTC +
Preference number: 6 (lower is better)
Translates to: IHCHYSMTCQLQ*KGRHPFPIVPF
Trigger: GAACGGGACAATTGGAAAAGGGTGTCTCCCCTTCCACTGCAATTGGCATGTCATGCTGTAGTGACAGTGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
ENST00000497045.1
CDS CAA 72 bp CACCACGTCAAGGCATTTTCGAACCTGGCCCTTGTCTaGACCTACACAGCCAATGCCACCCAAAACATAAAT +
Preference number: 6 (lower is better)
Translates to: HHVKAFSNLALV*TYTANATQNIN
Trigger: ATTTATGTTTTGGGTGGCATTGGCTGTGTAGGTCAAGACAAGGGCCAGGTTCGAAAATGCCTTGACGTGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
ENST00000492025.1
CDS CAA 72 bp GCCAATTGCAGTGGAAGGGGAGACACCCTTTTCCAATaGTCCCGTTCTACAGAGTACTTATCAACACAGTTT +
Preference number: 6 (lower is better)
Translates to: ANCSGRGDTLFQ*SRSTEYLSTQF
Trigger: AAACTGTGTTGATAAGTACTCTGTAGAACGGGACAATTGGAAAAGGGTGTCTCCCCTTCCACTGCAATTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
ENST00000497045.1
CDS CCA 72 bp GACGTTGATGGCTACAACATTCCACTGGTTTTCCCATaGGTCCAGTTCCAATATTTCTTTGGAGATAACCTC +
Preference number: 6 (lower is better)
Translates to: DVDGYNIPLVFP*VQFQYFFGDNL
Trigger: GAGGTTATCTCCAAAGAAATATTGGAACTGGACCCATGGGAAAACCAGTGGAATGTTGTAGCCATCAACGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
ENST00000476626.5
ENST00000492025.1
CDS CCA 72 bp TCATGCATGAGGACGTTGATGGCTACAACATTCCACTaGTTTTCCCATGGGTCCAGTTCCAATATTTCTTTG +
Preference number: 6 (lower is better)
Translates to: SCMRTLMATTFH*FSHGSSSNISL
Trigger: CAAAGAAATATTGGAACTGGACCCATGGGAAAACCAGTGGAATGTTGTAGCCATCAACGTCCTCATGCATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
ENST00000476626.5
ENST00000492025.1
CDS GCA 72 bp ATTGATCTTGGCTGGGGTCATACTGCAACAGTTTGTTaGTTAATCGATCAGGTTCTTCATCAGGAAGATCCA +
Preference number: 6 (lower is better)
Translates to: IDLGWGHTATVC*LIDQVLHQEDP
Trigger: TGGATCTTCCTGATGAAGAACCTGATCGATTAAGCAACAAACTGTTGCAGTATGACCCCAGCCAAGATCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343941.4
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
ENST00000492025.1
CDS CAA 90 bp TACATAAAGTTTATTATTCACTGTCACTACAGCATGACATGCCAATaGCAGTGGAAGGGGAGACACCCTTTTCCAATTGTCCCGTTCTAC +
Preference number: 6 (lower is better)
Translates to: YIKFIIHCHYSMTCQ*QWKGRHPFPIVPFY
Trigger: GTAGAACGGGACAATTGGAAAAGGGTGTCTCCCCTTCCACTGCAATTGGCATGTCATGCTGTAGTGACAGTGAATAATAAACTTTATGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
ENST00000497045.1
CDS TCA 72 bp CCAGTCTGTGGCAAGGAAATTTCTCTCCTTCTGCTGTaGGTACCACATCAATCATTTCTGCTAATTCTTTCA +
Preference number: 6 (lower is better)
Translates to: PVCGKEISLLLL*VPHQSFLLILS
Trigger: TGAAAGAATTAGCAGAAATGATTGATGTGGTACTCACAGCAGAAGGAGAGAAATTTCCTTGCCACAGACTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405109.5
ENST00000405256.5
ENST00000497045.1
CDS TCA 72 bp AAAAACTGGCATCCCCATAGCTCCTATGTCTTGATCTaGTTCCTGAAGAATTGTTGCCAATGCAAAGCAGAA +
Preference number: 6 (lower is better)
Translates to: KNWHPHSSYVLI*FLKNCCQCKAE
Trigger: TTCTGCTTTGCATTGGCAACAATTCTTCAGGAATCAGATCAAGACATAGGAGCTATGGGGATGCCAGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405109.5
ENST00000405256.5
ENST00000497045.1
CDS TCA 72 bp CAGTTCCTAAACCCTCTCCGTACTTGGGAGATGAGATaGAATAGGTTTTCCGTGATACAGGATCATAACAAA +
Preference number: 6 (lower is better)
Translates to: QFLNPLRTWEMR*NRFSVIQDHNK
Trigger: TTTGTTATGATCCTGTATCACGGAAAACCTATTTCATCTCATCTCCCAAGTACGGAGAGGGTTTAGGAACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405109.5
ENST00000405256.5
ENST00000497045.1
CDS GCA 72 bp ATAAAGTTTATTATTCACTGTCACTACAGCATGACATaGCAATTGCAGTGGAAGGGGAGACACCCTTTTCCA +
Preference number: 6 (lower is better)
Translates to: IKFIIHCHYSMT*QLQWKGRHPFP
Trigger: TGGAAAAGGGTGTCTCCCCTTCCACTGCAATTGGCATGTCATGCTGTAGTGACAGTGAATAATAAACTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000405109.5
ENST00000405256.5
ENST00000407609.7
ENST00000497045.1
CDS TCA 72 bp GTTGGTATTTTTCTTTTCCCTCAATCTTGCACTCCATaGTCTACTCTCCAAAGTTTCCAACTAAGTCTTCTT +
Preference number: 6 (lower is better)
Translates to: VGIFLFPQSCTP*STLQSFQLSLL
Trigger: AAGAAGACTTAGTTGGAAACTTTGGAGAGTAGATCATGGAGTGCAAGATTGAGGGAAAAGAAAAATACCAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000405109.5
CDS CAA 90 bp CTTCATGTAAGCTCACCTCGGCAAAGTGCTGATATAAATATTTCTTaGATCGATCAGATAAATCTTCAGCTCCAATCTGCTTTGCAAAAT +
Preference number: 6 (lower is better)
Translates to: LHVSSPRQSADINIS*IDQINLQLQSALQN
Trigger: ATTTTGCAAAGCAGATTGGAGCTGAAGATTTATCTGATCGATCAAAGAAATATTTATATCAGCACTTTGCCGAGGTGAGCTTACATGAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405109.5
ENST00000405256.5
ENST00000497045.1
CDS CAA 90 bp TCCTCTATCATGATACCTCGGCAAAGTGCTGATATAAATATTTCTTaGATCGATCAGATAAATCTTCAGCTCCAATCTGCTTTGCAAAAT +
Preference number: 6 (lower is better)
Translates to: SSIMIPRQSADINIS*IDQINLQLQSALQN
Trigger: ATTTTGCAAAGCAGATTGGAGCTGAAGATTTATCTGATCGATCAAAGAAATATTTATATCAGCACTTTGCCGAGGTATCATGATAGAGGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343941.4
CDS CAA 90 bp TTCAGTAAATTCAAGCTATGTTGGTATTTTTCTTTTCCCTCAATCTaGCACTCCATGATCTACTCTCCAAAGTTTCCAACTAAGTCTTCT +
Preference number: 6 (lower is better)
Translates to: FSKFKLCWYFSFPSI*HSMIYSPKFPTKSS
Trigger: AGAAGACTTAGTTGGAAACTTTGGAGAGTAGATCATGGAGTGCAAGATTGAGGGAAAAGAAAAATACCAACATAGCTTGAATTTACTGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000405109.5
CDS GCA 72 bp ATTCTTGTTCTTTTGTCTAGAGAGTTTAGAGGCACTTaGTTCTCCAGCCACAATTATAGTATTATTTTCCAT +
Preference number: 6 (lower is better)
Translates to: ILVLLSREFRGT*FSSHNYSIIFH
Trigger: ATGGAAAATAATACTATAATTGTGGCTGGAGAAGCAAGTGCCTCTAAACTCTCTAGACAAAAGAACAAGAAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405109.5
ENST00000405256.5
ENST00000497045.1