RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KBTBD11 (Homo sapiens)

Ensembl gene IDs: ENSG00000176595

Ensembl transcript IDs: ENST00000320248.4, ENST00000617214.2

Found 452 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCATCAGCCGTTGCCAGGCAGTCTCAGCAATGCCTCTGCCCTCCCTaGAGCAGTCCCAAAATGAAAGCCACACCTTGGAGGGTGTGGCTT +
Preference number: 1 (lower is better)
Translates to: ASAVARQSQQCLCPP*SSPKMKATPWRVWL
Trigger: AAGCCACACCCTCCAAGGTGTGGCTTTCATTTTGGGACTGCTGCAGGGAGGGCAGAGGCATTGCTGAGACTGCCTGGCAACGGCTGATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
3UTR GCA 90 bp AAGGTCCTACCTGGGGCATCAGCCGTTGCCAGGCAGTCTCAGCAATaGCTCTGCCCTCCCTGCAGCAGTCCCAAAATGAAAGCCACACCT +
Preference number: 1 (lower is better)
Translates to: KVLPGASAVARQSQQ*LCPPCSSPKMKATP
Trigger: AGGTGTGGCTTTCATTTTGGGACTGCTGCAGGGAGGGCAGAGGCATTGCTGAGACTGCCTGGCAACGGCTGATGCCCCAGGTAGGACCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
3UTR TCA 90 bp CCAGAAGCAAAGACAAGCAAAAGGAAAGCAAAGCGAAAGCGGCCCTaGGAGCGTCCTCGGGGCTCCTTCGAAGTGTCCAAACCACCAGCG +
Preference number: 1 (lower is better)
Translates to: PEAKTSKRKAKRKRP*ERPRGSFEVSKPPA
Trigger: CGCTGGTGGTTTGGACACTTCGAAGGAGCCCCGAGGACGCTCTCAGGGCCGCTTTCGCTTTGCTTTCCTTTTGCTTGTCTTTGCTTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
3UTR CCA 90 bp CCTTCTCTGTGTCCTGTCTGTCAAGGGACCCATCCGCACACCTCCTaGGTCTCAAGGCATCCACCCCCAGAAGCAAAGACAAGCAAAAGG +
Preference number: 1 (lower is better)
Translates to: PSLCPVCQGTHPHTS*VSRHPPPEAKTSKR
Trigger: CCTTTTGCTTGTCTTTGCTTCTGGGGGTGGATGCCTTGAGACCCAGGAGGTGTGCGGATGGGTCCCTTGACAGACAGGACACAGAGAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
3UTR TCA 90 bp GGCAGTCTCAGCAATGCCTCTGCCCTCCCTGCAGCAGTCCCAAAATaGAAGCCACACCTTGGAGGGTGTGGCTTTTCTCTGTTTCATGGG +
Preference number: 1 (lower is better)
Translates to: GSLSNASALPAAVPK*KPHLGGCGFSLFHG
Trigger: CCCATGAAACAGAGAAAAGCCACACCCTCCAAGGTGTGGCTTTCATTTTGGGACTGCTGCAGGGAGGGCAGAGGCATTGCTGAGACTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
3UTR TCA 90 bp CCTGTTTCATATGCGTTCAATCCAAATCCATCCACTTGGCGTGTCTaGAGCTCCTGCCAGCACAGTGTCTGTGCCGGGTGCCCGAAGGCT +
Preference number: 1 (lower is better)
Translates to: PVSYAFNPNPSTWRV*SSCQHSVCAGCPKA
Trigger: AGCCTTCGGGCACCCGGCACAGACACTGTGCTGGCAGGAGCTTCAGACACGCCAAGTGGATGGATTTGGATTGAACGCATATGAAACAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
3UTR CCA 90 bp CCTCCCTGCAGCAGTCCCAAAATGAAAGCCACACCTTGGAGGGTGTaGCTTTTCTCTGTTTCATGGGTGCAAACCCTAGCGGCTCCACAC +
Preference number: 1 (lower is better)
Translates to: PPCSSPKMKATPWRV*LFSVSWVQTLAAPH
Trigger: GTGTGGAGCCGCTAGGGTTTGCACCCATGAAACAGAGAAAAGCCACACCCTCCAAGGTGTGGCTTTCATTTTGGGACTGCTGCAGGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
3UTR CCA 90 bp TGCCTCTGCCCTCCCTGCAGCAGTCCCAAAATGAAAGCCACACCTTaGAGGGTGTGGCTTTTCTCTGTTTCATGGGTGCAAACCCTAGCG +
Preference number: 1 (lower is better)
Translates to: CLCPPCSSPKMKATP*RVWLFSVSWVQTLA
Trigger: CGCTAGGGTTTGCACCCATGAAACAGAGAAAAGCCACACCCTCCAAGGTGTGGCTTTCATTTTGGGACTGCTGCAGGGAGGGCAGAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
3UTR GCA 90 bp TCACTAAATGAAACGCTGGAAAGCCATGGGAACCGCACAGGACTGTaGAACCACCCCCATCCAACATCCACCACTTCTCATATCCTTTTC +
Preference number: 1 (lower is better)
Translates to: SLNETLESHGNRTGL*NHPHPTSTTSHILF
Trigger: GAAAAGGATATGAGAAGTGGTGGATGTTGGATGGGGGTGGTTGCACAGTCCTGTGCGGTTCCCATGGCTTTCCAGCGTTTCATTTAGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
3UTR GCA 90 bp ACTCAGAAACCAAATCCCGAAGTTCCAAATCCAGCTCTACAAAGCTaGAGGAAGCAGTGCGGAGTGGAGGGATGTTCCCAAGAGGAAGAA +
Preference number: 1 (lower is better)
Translates to: TQKPNPEVPNPALQS*RKQCGVEGCSQEEE
Trigger: TTCTTCCTCTTGGGAACATCCCTCCACTCCGCACTGCTTCCTGCAGCTTTGTAGAGCTGGATTTGGAACTTCGGGATTTGGTTTCTGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
3UTR CCA 90 bp AGGAAGGCTCAAGCTCATTCCTCTGCATCTCAAATGAACCTTGATTaGCAATACAGAAGGGATTGCTGTCAACTAAGCAAAAGGTCAGGC +
Preference number: 1 (lower is better)
Translates to: RKAQAHSSASQMNLD*QYRRDCCQLSKRSG
Trigger: GCCTGACCTTTTGCTTAGTTGACAGCAATCCCTTCTGTATTGCCAATCAAGGTTCATTTGAGATGCAGAGGAATGAGCTTGAGCCTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
3UTR TCA 90 bp ACATTTGAGAATCGCTTAGAGCTTGAACAGGCTTTGGAGGAGCTTTaGTCTCACATGAGAACCCGTCTCCTGTTTCATATGCGTTCAATC +
Preference number: 1 (lower is better)
Translates to: TFENRLELEQALEEL*SHMRTRLLFHMRSI
Trigger: GATTGAACGCATATGAAACAGGAGACGGGTTCTCATGTGAGATCAAAGCTCCTCCAAAGCCTGTTCAAGCTCTAAGCGATTCTCAAATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
3UTR TCA 90 bp TTTCTCCAGTATACTCCTATAAAAGGCCAATCAAGTCAGGCGATATaGAGTCTGTTTTTCTTTCCCAAGATGATTAACCAAGTTGCCAAG +
Preference number: 1 (lower is better)
Translates to: FLQYTPIKGQSSQAI*SLFFFPKMINQVAK
Trigger: CTTGGCAACTTGGTTAATCATCTTGGGAAAGAAAAACAGACTTCATATCGCCTGACTTGATTGGCCTTTTATAGGAGTATACTGGAGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
3UTR GCA 90 bp AGAAACGACCCAACTGATTTGTTTTTAATCCTCATACCCTGTCAATaGAGTGAGCCTCGTGTTAATTCTATTAGGGTATTTTGGAACTCA +
Preference number: 1 (lower is better)
Translates to: RNDPTDLFLILIPCQ*SEPRVNSIRVFWNS
Trigger: TGAGTTCCAAAATACCCTAATAGAATTAACACGAGGCTCACTGCATTGACAGGGTATGAGGATTAAAAACAAATCAGTTGGGTCGTTTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
3UTR TCA 90 bp AACACTGCTCATGGCGTGGCAGGTCCTCTAGTATGTATTTTTATGTaGTATCACTATTCAGAACTGTGGTGTATACTATTCTATAAATTT +
Preference number: 1 (lower is better)
Translates to: NTAHGVAGPLVCIFM*YHYSELWCILFYKF
Trigger: AAATTTATAGAATAGTATACACCACAGTTCTGAATAGTGATATCACATAAAAATACATACTAGAGGACCTGCCACGCCATGAGCAGTGTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
3UTR-3UTR CCA 90 bp TCTGTCAAGGGACCCATCCGCACACCTCCTGGGTCTCAAGGCATCCACCCCCAGTCCAAACCACCAGCGTaGCCAGCGGCCCCGACTCCC +
Preference number: 2 (lower is better)
Translates to: SVKGPIRTPPGSQGIHPQSKPPA*PAAPTP
Trigger: GGGAGTCGGGGCCGCTGGCCACGCTGGTGGTTTGGA...CTGGGGGTGGATGCCTTGAGACCCAGGAGGTGTGCGGATGGGTCCCTTGACAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
3UTR-3UTR TCA 90 bp TCTCAGCAATGCCTCTGCCCTCCCTGCAGCAGTCCCAAAATGAAAGCCACACCTAAGCGAAAGCGGCCCTaGGAGCGTCCTCGGGGCTCC +
Preference number: 2 (lower is better)
Translates to: SQQCLCPPCSSPKMKATPKRKRP*ERPRGS
Trigger: GGAGCCCCGAGGACGCTCTCAGGGCCGCTTTCGCTT...AGGTGTGGCTTTCATTTTGGGACTGCTGCAGGGAGGGCAGAGGCATTGCTGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
3UTR-3UTR GCA 90 bp ATCCCGAAGTTCCAAATCCAGCTCTACAAAGCTGCAGGAAGCAGTGCGGAGTGGGGGCCGGCTGCAGGCTaGCTCAGGAACCCCCACTGT +
Preference number: 2 (lower is better)
Translates to: IPKFQIQLYKAAGSSAEWGPAAG*LRNPHC
Trigger: ACAGTGGGGGTTCCTGAGGCAGCCTGCAGCCGGCCC...CCACTCCGCACTGCTTCCTGCAGCTTTGTAGAGCTGGATTTGGAACTTCGGGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
3UTR-3UTR CCA 90 bp GCAGTGCGGAGTGGAGGGATGTTCCCAAGAGGAAGAATAAAACCGGAAGGAAAAGTGACAGGGAGCACCTaGGGCTTTGCTGCCGGGCCC +
Preference number: 2 (lower is better)
Translates to: AVRSGGMFPRGRIKPEGKVTGST*GFAAGP
Trigger: GGGCCCGGCAGCAAAGCCCCAGGTGCTCCCTGTCAC...TTTTCCTTCCGGTTTTATTCTTCCTCTTGGGAACATCCCTCCACTCCGCACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
3UTR CAA 90 bp AACACCACTTTGAATTGGAAAAGGTCCTACCTGGGGCATCAGCCGTaGCCAGGCAGTCTCAGCAATGCCTCTGCCCTCCCTGCAGCAGTC +
Preference number: 2 (lower is better)
Translates to: NTTLNWKRSYLGHQP*PGSLSNASALPAAV
Trigger: GACTGCTGCAGGGAGGGCAGAGGCATTGCTGAGACTGCCTGGCAACGGCTGATGCCCCAGGTAGGACCTTTTCCAATTCAAAGTGGTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
3UTR-3UTR GCA 90 bp CCGGATGTGGAAAACGTGGAAATGATGTGGCCACTGAAAGAAATTCAAGACAACCACCCCGGGGCCGGCTaGAGGCTGCCTCAGGAACCC +
Preference number: 2 (lower is better)
Translates to: PDVENVEMMWPLKEIQDNHPGAG*RLPQEP
Trigger: GGGTTCCTGAGGCAGCCTGCAGCCGGCCCCGGGGTG...GTTGTCTTGAATTTCTTTCAGTGGCCACATCATTTCCACGTTTTCCACATCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
3UTR-3UTR GCA 90 bp TCTCAGCAATGCCTCTGCCCTCCCTGCAGCAGTCCCAAAATGAAAGCCACACCTAGGCGTGACCCTCTCTaGGTGCTTCCCCCGATAGTT +
Preference number: 2 (lower is better)
Translates to: SQQCLCPPCSSPKMKATPRRDPL*VLPPIV
Trigger: AACTATCGGGGGAAGCACGCAGAGAGGGTCACGCCT...AGGTGTGGCTTTCATTTTGGGACTGCTGCAGGGAGGGCAGAGGCATTGCTGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
3UTR-3UTR TCA 90 bp GCAGTGCGGAGTGGAGGGATGTTCCCAAGAGGAAGAATAAAACCGGAAGGAAAACCCTCGGTCCAACAGTaGGACGGAGCTGCTCTAGGC +
Preference number: 2 (lower is better)
Translates to: AVRSGGMFPRGRIKPEGKPSVQQ*DGAALG
Trigger: GCCTAGAGCAGCTCCGTCTCACTGTTGGACCGAGGG...TTTTCCTTCCGGTTTTATTCTTCCTCTTGGGAACATCCCTCCACTCCGCACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
3UTR CAA 90 bp ATGCCTCTGCCCTCCCTGCAGCAGTCCCAAAATGAAAGCCACACCTaGGAGGGTGTGGCTTTTCTCTGTTTCATGGGTGCAAACCCTAGC +
Preference number: 2 (lower is better)
Translates to: MPLPSLQQSQNESHT*EGVAFLCFMGANPS
Trigger: GCTAGGGTTTGCACCCATGAAACAGAGAAAAGCCACACCCTCCAAGGTGTGGCTTTCATTTTGGGACTGCTGCAGGGAGGGCAGAGGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
3UTR-3UTR GCA 90 bp AAACGCTGGAAAGCCATGGGAACCGCACAGGACTGTGCAACCACCCCCATCCAAACAGTGAGACGGAGCTaGTCTAGGCATGTGAGTTTG +
Preference number: 2 (lower is better)
Translates to: KRWKAMGTAQDCATTPIQTVRRS*SRHVSL
Trigger: CAAACTCACATGCCTAGAGCAGCTCCGTCTCACTGT...TTGGATGGGGGTGGTTGCACAGTCCTGTGCGGTTCCCATGGCTTTCCAGCGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
3UTR-3UTR GCA 90 bp AGTCTGTTTTTCTTTCCCAAGATGATTAACCAAGTTGCCAAGCTATCCCCTCAGGGGCCGGCTGCAGGCTaGCTCAGGAACCCCCACTGT +
Preference number: 2 (lower is better)
Translates to: SLFFFPKMINQVAKLSPQGPAAG*LRNPHC
Trigger: ACAGTGGGGGTTCCTGAGGCAGCCTGCAGCCGGCCC...CTGAGGGGATAGCTTGGCAACTTGGTTAATCATCTTGGGAAAGAAAAACAGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
3UTR-3UTR GCA 90 bp ATCCCGAAGTTCCAAATCCAGCTCTACAAAGCTGCAGGAAGCAGTGCGGAGTGGTGCCTCTGCCCTCCCTaGAGCAGTCCCAAAATGAAA +
Preference number: 2 (lower is better)
Translates to: IPKFQIQLYKAAGSSAEWCLCPP*SSPKMK
Trigger: TTTCATTTTGGGACTGCTGCAGGGAGGGCAGAGGCA...CCACTCCGCACTGCTTCCTGCAGCTTTGTAGAGCTGGATTTGGAACTTCGGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
3UTR-3UTR CCA 90 bp TCGCCTCTATTTGTGAGCATGGATCTCATCCTCAAAGTCATAATAGTAAGTCCTGGGCCCAAAGGGACCTaGGCCCCGCAAACCCCTGCC +
Preference number: 2 (lower is better)
Translates to: SPLFVSMDLILKVIIVSPGPKGT*APQTPA
Trigger: GGCAGGGGTTTGCGGGGCCCAGGTCCCTTTGGGCCC...AGGACTTACTATTATGACTTTGAGGATGAGATCCATGCTCACAAATAGAGGCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
3UTR-3UTR GCA 90 bp AGTCTGTTTTTCTTTCCCAAGATGATTAACCAAGTTGCCAAGCTATCCCCTCAGTGCGCACAGCCTCGGTaGTCTGCGGGGTTCGGGACA +
Preference number: 2 (lower is better)
Translates to: SLFFFPKMINQVAKLSPQCAQPR*SAGFGT
Trigger: TGTCCCGAACCCCGCAGAGCACCGAGGCTGTGCGCA...CTGAGGGGATAGCTTGGCAACTTGGTTAATCATCTTGGGAAAGAAAAACAGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
3UTR-3UTR CCA 90 bp GCCAACCAAAGCGAGCACATGGTACGAAATTTTCAACTAAATCAGAAAGAGCTTTCCAAACCACCAGCGTaGCCAGCGGCCCCGACTCCC +
Preference number: 2 (lower is better)
Translates to: ANQSEHMVRNFQLNQKELSKPPA*PAAPTP
Trigger: GGGAGTCGGGGCCGCTGGCCACGCTGGTGGTTTGGA...AAGCTCTTTCTGATTTAGTTGAAAATTTCGTACCATGTGCTCGCTTTGGTTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
3UTR-3UTR CCA 90 bp ATCCCGAAGTTCCAAATCCAGCTCTACAAAGCTGCAGGAAGCAGTGCGGAGTGGCAAAAACACTGCTCATaGCGTGGCAGGTCCTCTAGT +
Preference number: 2 (lower is better)
Translates to: IPKFQIQLYKAAGSSAEWQKHCS*RGRSSS
Trigger: ACTAGAGGACCTGCCACGCCATGAGCAGTGTTTTTG...CCACTCCGCACTGCTTCCTGCAGCTTTGTAGAGCTGGATTTGGAACTTCGGGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
3UTR-3UTR GCA 90 bp AAGCGAGCACATGGTACGAAATTTTCAACTAAATCAGAAAGAGCTTTACTTATCCACCCCGGGGCCGGCTaGAGGCTGCCTCAGGAACCC +
Preference number: 2 (lower is better)
Translates to: KRAHGTKFSTKSERALLIHPGAG*RLPQEP
Trigger: GGGTTCCTGAGGCAGCCTGCAGCCGGCCCCGGGGTG...GATAAGTAAAGCTCTTTCTGATTTAGTTGAAAATTTCGTACCATGTGCTCGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
3UTR-3UTR GCA 90 bp GCAGTGCGGAGTGGAGGGATGTTCCCAAGAGGAAGAATAAAACCGGAAGGAAAATGCCTCTGCCCTCCCTaGAGCAGTCCCAAAATGAAA +
Preference number: 2 (lower is better)
Translates to: AVRSGGMFPRGRIKPEGKCLCPP*SSPKMK
Trigger: TTTCATTTTGGGACTGCTGCAGGGAGGGCAGAGGCA...TTTTCCTTCCGGTTTTATTCTTCCTCTTGGGAACATCCCTCCACTCCGCACTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
3UTR-3UTR CCA 90 bp ATCCCGAAGTTCCAAATCCAGCTCTACAAAGCTGCAGGAAGCAGTGCGGAGTGGCTTTTCTCTGTTTCATaGGTGCAAACCCTAGCGGCT +
Preference number: 2 (lower is better)
Translates to: IPKFQIQLYKAAGSSAEWLFSVS*VQTLAA
Trigger: AGCCGCTAGGGTTTGCACCCATGAAACAGAGAAAAG...CCACTCCGCACTGCTTCCTGCAGCTTTGTAGAGCTGGATTTGGAACTTCGGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
3UTR-3UTR CCA 90 bp ATCCCGAAGTTCCAAATCCAGCTCTACAAAGCTGCAGGAAGCAGTGCGGAGTGGATGAAAGCCACACCTTaGAGGGTGTGGCTTTTCTCT +
Preference number: 2 (lower is better)
Translates to: IPKFQIQLYKAAGSSAEWMKATP*RVWLFS
Trigger: AGAGAAAAGCCACACCCTCCAAGGTGTGGCTTTCAT...CCACTCCGCACTGCTTCCTGCAGCTTTGTAGAGCTGGATTTGGAACTTCGGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
3UTR-3UTR CCA 90 bp GCAGTGCGGAGTGGAGGGATGTTCCCAAGAGGAAGAATAAAACCGGAAGGAAAACACGAGTCAGACATTTaGAAATGCCCCGGCATACGG +
Preference number: 2 (lower is better)
Translates to: AVRSGGMFPRGRIKPEGKHESDI*KCPGIR
Trigger: CCGTATGCCGGGGCATTTCCAAATGTCTGACTCGTG...TTTTCCTTCCGGTTTTATTCTTCCTCTTGGGAACATCCCTCCACTCCGCACTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
3UTR-3UTR CCA 90 bp ATCCCGAAGTTCCAAATCCAGCTCTACAAAGCTGCAGGAAGCAGTGCGGAGTGGAAAGGCCCCTGCGTATaGGTTAATTTCACGAGTCAG +
Preference number: 2 (lower is better)
Translates to: IPKFQIQLYKAAGSSAEWKGPCV*VNFTSQ
Trigger: CTGACTCGTGAAATTAACCCATACGCAGGGGCCTTT...CCACTCCGCACTGCTTCCTGCAGCTTTGTAGAGCTGGATTTGGAACTTCGGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
3UTR-3UTR TCA 90 bp ATCCCGAAGTTCCAAATCCAGCTCTACAAAGCTGCAGGAAGCAGTGCGGAGTGGTTTCAACTGAAAATATaGAAGCCCCCTCGGTCCAAC +
Preference number: 2 (lower is better)
Translates to: IPKFQIQLYKAAGSSAEWFQLKI*KPPRSN
Trigger: GTTGGACCGAGGGGGCTTTCATATTTTCAGTTGAAA...CCACTCCGCACTGCTTCCTGCAGCTTTGTAGAGCTGGATTTGGAACTTCGGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
3UTR-3UTR TCA 90 bp GCAGTGCGGAGTGGAGGGATGTTCCCAAGAGGAAGAATAAAACCGGAAGGAAAATCTCGTTCCAGATTATaGAAGCGGCTGGGCATACAG +
Preference number: 2 (lower is better)
Translates to: AVRSGGMFPRGRIKPEGKSRSRL*KRLGIQ
Trigger: CTGTATGCCCAGCCGCTTTCATAATCTGGAACGAGA...TTTTCCTTCCGGTTTTATTCTTCCTCTTGGGAACATCCCTCCACTCCGCACTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
3UTR-3UTR TCA 90 bp TCTCAGCAATGCCTCTGCCCTCCCTGCAGCAGTCCCAAAATGAAAGCCACACCTTCAAGTCAGGCGATATaGAGTCTGTTTTTCTTTCCC +
Preference number: 2 (lower is better)
Translates to: SQQCLCPPCSSPKMKATPSSQAI*SLFFFP
Trigger: GGGAAAGAAAAACAGACTTCATATCGCCTGACTTGA...AGGTGTGGCTTTCATTTTGGGACTGCTGCAGGGAGGGCAGAGGCATTGCTGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
3UTR-3UTR GCA 90 bp CCGGATGTGGAAAACGTGGAAATGATGTGGCCACTGAAAGAAATTCAAGACAACTGGGGCATCAGCCGTTaGCAGGCAGTCTCAGCAATG +
Preference number: 2 (lower is better)
Translates to: PDVENVEMMWPLKEIQDNWGISR*QAVSAM
Trigger: CATTGCTGAGACTGCCTGGCAACGGCTGATGCCCCA...GTTGTCTTGAATTTCTTTCAGTGGCCACATCATTTCCACGTTTTCCACATCCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
3UTR-3UTR CCA 90 bp AGTCTGTTTTTCTTTCCCAAGATGATTAACCAAGTTGCCAAGCTATCCCCTCAGCATCCGCACACCTCCTaGGTCTCAAGGCATCCACCC +
Preference number: 2 (lower is better)
Translates to: SLFFFPKMINQVAKLSPQHPHTS*VSRHPP
Trigger: GGGTGGATGCCTTGAGACCCAGGAGGTGTGCGGATG...CTGAGGGGATAGCTTGGCAACTTGGTTAATCATCTTGGGAAAGAAAAACAGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
3UTR-3UTR CCA 90 bp CCGGATGTGGAAAACGTGGAAATGATGTGGCCACTGAAAGAAATTCAAGACAACGGAAGCAGTGCGGAGTaGAGGGATGTTCCCAAGAGG +
Preference number: 2 (lower is better)
Translates to: PDVENVEMMWPLKEIQDNGSSAE*RDVPKR
Trigger: CCTCTTGGGAACATCCCTCCACTCCGCACTGCTTCC...GTTGTCTTGAATTTCTTTCAGTGGCCACATCATTTCCACGTTTTCCACATCCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
3UTR-3UTR TCA 90 bp AAGCGAGCACATGGTACGAAATTTTCAACTAAATCAGAAAGAGCTTTACTTATCTCGCGGCGACCTACTTaGGGGTCCCAGGCTCCTGCG +
Preference number: 2 (lower is better)
Translates to: KRAHGTKFSTKSERALLISRRPT*GSQAPA
Trigger: CGCAGGAGCCTGGGACCCTCAAGTAGGTCGCCGCGA...GATAAGTAAAGCTCTTTCTGATTTAGTTGAAAATTTCGTACCATGTGCTCGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
3UTR-3UTR GCA 90 bp AAGCGAGCACATGGTACGAAATTTTCAACTAAATCAGAAAGAGCTTTACTTATCACAGCCTCGGTGCTCTaGGGGGTTCGGGACACCCCG +
Preference number: 2 (lower is better)
Translates to: KRAHGTKFSTKSERALLITASVL*GVRDTP
Trigger: CGGGGTGTCCCGAACCCCGCAGAGCACCGAGGCTGT...GATAAGTAAAGCTCTTTCTGATTTAGTTGAAAATTTCGTACCATGTGCTCGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
3UTR-3UTR GCA 90 bp AAACGCTGGAAAGCCATGGGAACCGCACAGGACTGTGCAACCACCCCCATCCAATTCCTACTTATGATGTaGTGTTTGGTCACATTTAGC +
Preference number: 2 (lower is better)
Translates to: KRWKAMGTAQDCATTPIQFLLMM*CLVTFS
Trigger: GCTAAATGTGACCAAACAGCACATCATAAGTAGGAA...TTGGATGGGGGTGGTTGCACAGTCCTGTGCGGTTCCCATGGCTTTCCAGCGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
3UTR-3UTR CCA 90 bp GCCAACCAAAGCGAGCACATGGTACGAAATTTTCAACTAAATCAGAAAGAGCTTCATCCGCACACCTCCTaGGTCTCAAGGCATCCACCC +
Preference number: 2 (lower is better)
Translates to: ANQSEHMVRNFQLNQKELHPHTS*VSRHPP
Trigger: GGGTGGATGCCTTGAGACCCAGGAGGTGTGCGGATG...AAGCTCTTTCTGATTTAGTTGAAAATTTCGTACCATGTGCTCGCTTTGGTTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
3UTR-3UTR CCA 90 bp ATCCCGAAGTTCCAAATCCAGCTCTACAAAGCTGCAGGAAGCAGTGCGGAGTGGGCTGGGCATACAGAGTaGACTATCAAAGATTGCTTT +
Preference number: 2 (lower is better)
Translates to: IPKFQIQLYKAAGSSAEWAGHTE*TIKDCF
Trigger: AAAGCAATCTTTGATAGTCCACTCTGTATGCCCAGC...CCACTCCGCACTGCTTCCTGCAGCTTTGTAGAGCTGGATTTGGAACTTCGGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
3UTR-3UTR CCA 90 bp TCTCAGCAATGCCTCTGCCCTCCCTGCAGCAGTCCCAAAATGAAAGCCACACCTCTGAAAATATTAGCCTaGTCCTGGTCCCATTTCATA +
Preference number: 2 (lower is better)
Translates to: SQQCLCPPCSSPKMKATPLKILA*SWSHFI
Trigger: TATGAAATGGGACCAGGACCAGGCTAATATTTTCAG...AGGTGTGGCTTTCATTTTGGGACTGCTGCAGGGAGGGCAGAGGCATTGCTGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
3UTR-3UTR TCA 90 bp ATCCCGAAGTTCCAAATCCAGCTCTACAAAGCTGCAGGAAGCAGTGCGGAGTGGTTTTCTTTCCCAAGATaGTTAACCAAGTTGCCAAGC +
Preference number: 2 (lower is better)
Translates to: IPKFQIQLYKAAGSSAEWFSFPR*LTKLPS
Trigger: GCTTGGCAACTTGGTTAATCATCTTGGGAAAGAAAA...CCACTCCGCACTGCTTCCTGCAGCTTTGTAGAGCTGGATTTGGAACTTCGGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
3UTR-3UTR GCA 90 bp AAGCGAGCACATGGTACGAAATTTTCAACTAAATCAGAAAGAGCTTTACTTATCAGGGTCCCAGGCTCCTaGGCACAGCCTCGGTGCTCT +
Preference number: 2 (lower is better)
Translates to: KRAHGTKFSTKSERALLIRVPGS*AQPRCS
Trigger: AGAGCACCGAGGCTGTGCGCAGGAGCCTGGGACCCT...GATAAGTAAAGCTCTTTCTGATTTAGTTGAAAATTTCGTACCATGTGCTCGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
3UTR-3UTR GCA 90 bp GCAGTGCGGAGTGGAGGGATGTTCCCAAGAGGAAGAATAAAACCGGAAGGAAAACTTGTTATAAATCTATaGCCACTGTCACTCGGCCAC +
Preference number: 2 (lower is better)
Translates to: AVRSGGMFPRGRIKPEGKLVINL*PLSLGH
Trigger: GTGGCCGAGTGACAGTGGGCATAGATTTATAACAAG...TTTTCCTTCCGGTTTTATTCTTCCTCTTGGGAACATCCCTCCACTCCGCACTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
3UTR-3UTR GCA 90 bp TCTCAGCAATGCCTCTGCCCTCCCTGCAGCAGTCCCAAAATGAAAGCCACACCTTACATGCAGTTTACTTaGAAATCTATGGTGATAAGC +
Preference number: 2 (lower is better)
Translates to: SQQCLCPPCSSPKMKATPYMQFT*KSMVIS
Trigger: GCTTATCACCATAGATTTGCAAGTAAACTGCATGTA...AGGTGTGGCTTTCATTTTGGGACTGCTGCAGGGAGGGCAGAGGCATTGCTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
3UTR-3UTR CCA 90 bp ATCCCGAAGTTCCAAATCCAGCTCTACAAAGCTGCAGGAAGCAGTGCGGAGTGGCTTACAGTAAGAAAATaGGTTGGATTCGGAGTTCAA +
Preference number: 2 (lower is better)
Translates to: IPKFQIQLYKAAGSSAEWLTVRK*VGFGVQ
Trigger: TTGAACTCCGAATCCAACCCATTTTCTTACTGTAAG...CCACTCCGCACTGCTTCCTGCAGCTTTGTAGAGCTGGATTTGGAACTTCGGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
3UTR-3UTR CCA 90 bp CCGGATGTGGAAAACGTGGAAATGATGTGGCCACTGAAAGAAATTCAAGACAACGCCTTTTCAGACATTTaGAAAGGCCCCTGCGTATGG +
Preference number: 2 (lower is better)
Translates to: PDVENVEMMWPLKEIQDNAFSDI*KGPCVW
Trigger: CCATACGCAGGGGCCTTTCCAAATGTCTGAAAAGGC...GTTGTCTTGAATTTCTTTCAGTGGCCACATCATTTCCACGTTTTCCACATCCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
3UTR-3UTR TCA 90 bp GCAGTGCGGAGTGGAGGGATGTTCCCAAGAGGAAGAATAAAACCGGAAGGAAAACTACACGATCCACATTaGAAACATCATATACAGTGG +
Preference number: 2 (lower is better)
Translates to: AVRSGGMFPRGRIKPEGKLHDPH*KHHIQW
Trigger: CCACTGTATATGATGTTTTCAATGTGGATCGTGTAG...TTTTCCTTCCGGTTTTATTCTTCCTCTTGGGAACATCCCTCCACTCCGCACTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
3UTR-3UTR GCA 90 bp CCGGATGTGGAAAACGTGGAAATGATGTGGCCACTGAAAGAAATTCAAGACAACAAAAAGCAAAAACACTaGTCATGGCGTGGCAGGTCC +
Preference number: 2 (lower is better)
Translates to: PDVENVEMMWPLKEIQDNKKQKH*SWRGRS
Trigger: GGACCTGCCACGCCATGAGCAGTGTTTTTGCTTTTT...GTTGTCTTGAATTTCTTTCAGTGGCCACATCATTTCCACGTTTTCCACATCCGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
3UTR-3UTR CCA 90 bp CCGGATGTGGAAAACGTGGAAATGATGTGGCCACTGAAAGAAATTCAAGACAACAACACCACTTTGAATTaGAAAAGGTCCTACCTGGGG +
Preference number: 2 (lower is better)
Translates to: PDVENVEMMWPLKEIQDNNTTLN*KRSYLG
Trigger: CCCCAGGTAGGACCTTTTCCAATTCAAAGTGGTGTT...GTTGTCTTGAATTTCTTTCAGTGGCCACATCATTTCCACGTTTTCCACATCCGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
3UTR-3UTR GCA 90 bp TCGCCTCTATTTGTGAGCATGGATCTCATCCTCAAAGTCATAATAGTAAGTCCTCTTGTTATAAATCTATaGCCACTGTCACTCGGCCAC +
Preference number: 2 (lower is better)
Translates to: SPLFVSMDLILKVIIVSPLVINL*PLSLGH
Trigger: GTGGCCGAGTGACAGTGGGCATAGATTTATAACAAG...AGGACTTACTATTATGACTTTGAGGATGAGATCCATGCTCACAAATAGAGGCGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
3UTR-3UTR TCA 90 bp CCGGATGTGGAAAACGTGGAAATGATGTGGCCACTGAAAGAAATTCAAGACAACGAGAAACGACCCAACTaGTTTGTTTTTAATCCTCAT +
Preference number: 2 (lower is better)
Translates to: PDVENVEMMWPLKEIQDNEKRPN*FVFNPH
Trigger: ATGAGGATTAAAAACAAATCAGTTGGGTCGTTTCTC...GTTGTCTTGAATTTCTTTCAGTGGCCACATCATTTCCACGTTTTCCACATCCGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
3UTR-3UTR TCA 90 bp AGTCTGTTTTTCTTTCCCAAGATGATTAACCAAGTTGCCAAGCTATCCCCTCAGAGTTTTTCCTACTTATaGTGTGCTGTTTGGTCACAT +
Preference number: 2 (lower is better)
Translates to: SLFFFPKMINQVAKLSPQSFSYL*CAVWSH
Trigger: ATGTGACCAAACAGCACATCATAAGTAGGAAAAACT...CTGAGGGGATAGCTTGGCAACTTGGTTAATCATCTTGGGAAAGAAAAACAGACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
3UTR CAA 90 bp ATTCAGAACTGTGGTGTATACTATTCTATAAATTTCCACAATAGGTaGGCCGGACATCCTTTAATGGTGGGTATTAATTCCTCTTATTCT +
Preference number: 2 (lower is better)
Translates to: IQNCGVYYSINFHNR*AGHPLMVGINSSYS
Trigger: AGAATAAGAGGAATTAATACCCACCATTAAAGGATGTCCGGCCAACCTATTGTGGAAATTTATAGAATAGTATACACCACAGTTCTGAAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
3UTR TCA 72 bp CTGCGTGCTTCCCCCGATAGTTCGCGGCGACCTACTTaGGGGTCCCAGGCTCCTGCGCACAGCCTCGGTGCT +
Preference number: 3 (lower is better)
Translates to: LRASPDSSRRPT*GSQAPAHSLGA
Trigger: AGCACCGAGGCTGTGCGCAGGAGCCTGGGACCCTCAAGTAGGTCGCCGCGAACTATCGGGGGAAGCACGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
3UTR-3UTR CAA 90 bp TCTCAGCAATGCCTCTGCCCTCCCTGCAGCAGTCCCAAAATGAAAGCCACACCTGGAGCACCTGGGGCTTaGCTGCCGGGCCCCACAGGA +
Preference number: 3 (lower is better)
Translates to: SQQCLCPPCSSPKMKATPGAPGA*LPGPTG
Trigger: TCCTGTGGGGCCCGGCAGCAAAGCCCCAGGTGCTCC...AGGTGTGGCTTTCATTTTGGGACTGCTGCAGGGAGGGCAGAGGCATTGCTGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
3UTR CCA 72 bp CTTAGTGCATTTTGTTGTGAGGTGACAGGGAGCACCTaGGGCTTTGCTGCCGGGCCCCACAGGAAGCTGTGC +
Preference number: 3 (lower is better)
Translates to: LSAFCCEVTGST*GFAAGPHRKLC
Trigger: GCACAGCTTCCTGTGGGGCCCGGCAGCAAAGCCCCAGGTGCTCCCTGTCACCTCACAACAAAATGCACTAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
3UTR CCA 72 bp GCCACACCTTGGAGGGTGTGGCTTTTCTCTGTTTCATaGGTGCAAACCCTAGCGGCTCCACACCCCAGGGAC +
Preference number: 3 (lower is better)
Translates to: ATPWRVWLFSVS*VQTLAAPHPRD
Trigger: GTCCCTGGGGTGTGGAGCCGCTAGGGTTTGCACCCATGAAACAGAGAAAAGCCACACCCTCCAAGGTGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
3UTR GCA 72 bp GTTGCCAGGCAGTCTCAGCAATGCCTCTGCCCTCCCTaGAGCAGTCCCAAAATGAAAGCCACACCTTGGAGG +
Preference number: 3 (lower is better)
Translates to: VARQSQQCLCPP*SSPKMKATPWR
Trigger: CCTCCAAGGTGTGGCTTTCATTTTGGGACTGCTGCAGGGAGGGCAGAGGCATTGCTGAGACTGCCTGGCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
3UTR CCA 72 bp TGTCCTGTCTGTCAAGGGACCCATCCGCACACCTCCTaGGTCTCAAGGCATCCACCCCCAGAAGCAAAGACA +
Preference number: 3 (lower is better)
Translates to: CPVCQGTHPHTS*VSRHPPPEAKT
Trigger: TGTCTTTGCTTCTGGGGGTGGATGCCTTGAGACCCAGGAGGTGTGCGGATGGGTCCCTTGACAGACAGGACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
3UTR TCA 72 bp AAGACAAGCAAAAGGAAAGCAAAGCGAAAGCGGCCCTaGGAGCGTCCTCGGGGCTCCTTCGAAGTGTCCAAA +
Preference number: 3 (lower is better)
Translates to: KTSKRKAKRKRP*ERPRGSFEVSK
Trigger: TTTGGACACTTCGAAGGAGCCCCGAGGACGCTCTCAGGGCCGCTTTCGCTTTGCTTTCCTTTTGCTTGTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
3UTR-3UTR CAA 90 bp CCGGATGTGGAAAACGTGGAAATGATGTGGCCACTGAAAGAAATTCAAGACAACTTCGCGGCGACCTACTaGAGGGTCCCAGGCTCCTGC +
Preference number: 3 (lower is better)
Translates to: PDVENVEMMWPLKEIQDNFAATY*RVPGSC
Trigger: GCAGGAGCCTGGGACCCTCAAGTAGGTCGCCGCGAA...GTTGTCTTGAATTTCTTTCAGTGGCCACATCATTTCCACGTTTTCCACATCCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
3UTR GCA 72 bp TATGAAAGCCCCCTCGGTCCAACAGTGAGACGGAGCTaGTCTAGGCATGTGAGTTTGAGTAGCAATGGTGTG +
Preference number: 3 (lower is better)
Translates to: YESPLGPTVRRS*SRHVSLSSNGV
Trigger: CACACCATTGCTACTCAAACTCACATGCCTAGAGCAGCTCCGTCTCACTGTTGGACCGAGGGGGCTTTCATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
3UTR CCA 72 bp CCTCCCTGCAGCAGTCCCAAAATGAAAGCCACACCTTaGAGGGTGTGGCTTTTCTCTGTTTCATGGGTGCAA +
Preference number: 3 (lower is better)
Translates to: PPCSSPKMKATP*RVWLFSVSWVQ
Trigger: TTGCACCCATGAAACAGAGAAAAGCCACACCCTCCAAGGTGTGGCTTTCATTTTGGGACTGCTGCAGGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
3UTR-3UTR CAA 90 bp ATCCCGAAGTTCCAAATCCAGCTCTACAAAGCTGCAGGAAGCAGTGCGGAGTGGTCTAGGCATGTGAGTTaGAGTAGCAATGGTGTGGGG +
Preference number: 3 (lower is better)
Translates to: IPKFQIQLYKAAGSSAEWSRHVS*SSNGVG
Trigger: CCCCACACCATTGCTACTCAAACTCACATGCCTAGA...CCACTCCGCACTGCTTCCTGCAGCTTTGTAGAGCTGGATTTGGAACTTCGGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
3UTR-3UTR CAA 90 bp ATCCCGAAGTTCCAAATCCAGCTCTACAAAGCTGCAGGAAGCAGTGCGGAGTGGTGCCTTTTCAGACATTaGGAAAGGCCCCTGCGTATG +
Preference number: 3 (lower is better)
Translates to: IPKFQIQLYKAAGSSAEWCLFRH*ERPLRM
Trigger: CATACGCAGGGGCCTTTCCAAATGTCTGAAAAGGCA...CCACTCCGCACTGCTTCCTGCAGCTTTGTAGAGCTGGATTTGGAACTTCGGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
3UTR-3UTR CAA 90 bp GCCAACCAAAGCGAGCACATGGTACGAAATTTTCAACTAAATCAGAAAGAGCTTTTCGCGGCGACCTACTaGAGGGTCCCAGGCTCCTGC +
Preference number: 3 (lower is better)
Translates to: ANQSEHMVRNFQLNQKELFAATY*RVPGSC
Trigger: GCAGGAGCCTGGGACCCTCAAGTAGGTCGCCGCGAA...AAGCTCTTTCTGATTTAGTTGAAAATTTCGTACCATGTGCTCGCTTTGGTTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
3UTR CCA 72 bp AGCAGTCCCAAAATGAAAGCCACACCTTGGAGGGTGTaGCTTTTCTCTGTTTCATGGGTGCAAACCCTAGCG +
Preference number: 3 (lower is better)
Translates to: SSPKMKATPWRV*LFSVSWVQTLA
Trigger: CGCTAGGGTTTGCACCCATGAAACAGAGAAAAGCCACACCCTCCAAGGTGTGGCTTTCATTTTGGGACTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
3UTR-3UTR CAA 90 bp GCAGTGCGGAGTGGAGGGATGTTCCCAAGAGGAAGAATAAAACCGGAAGGAAAATGCCTTTTCAGACATTaGGAAAGGCCCCTGCGTATG +
Preference number: 3 (lower is better)
Translates to: AVRSGGMFPRGRIKPEGKCLFRH*ERPLRM
Trigger: CATACGCAGGGGCCTTTCCAAATGTCTGAAAAGGCA...TTTTCCTTCCGGTTTTATTCTTCCTCTTGGGAACATCCCTCCACTCCGCACTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
3UTR-3UTR CAA 90 bp ATCCCGAAGTTCCAAATCCAGCTCTACAAAGCTGCAGGAAGCAGTGCGGAGTGGGCAATACAGAAGGGATaGCTGTCAACTAAGCAAAAG +
Preference number: 3 (lower is better)
Translates to: IPKFQIQLYKAAGSSAEWAIQKG*LSTKQK
Trigger: CTTTTGCTTAGTTGACAGCAATCCCTTCTGTATTGC...CCACTCCGCACTGCTTCCTGCAGCTTTGTAGAGCTGGATTTGGAACTTCGGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
3UTR-3UTR CAA 90 bp GCAGTGCGGAGTGGAGGGATGTTCCCAAGAGGAAGAATAAAACCGGAAGGAAAATTTTCCTACACAGTGTaGGACGCAGACTTAGAACAC +
Preference number: 3 (lower is better)
Translates to: AVRSGGMFPRGRIKPEGKFSYTV*DADLEH
Trigger: GTGTTCTAAGTCTGCGTCCAACACTGTGTAGGAAAA...TTTTCCTTCCGGTTTTATTCTTCCTCTTGGGAACATCCCTCCACTCCGCACTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
3UTR TCA 72 bp TCGCTACATCAGTTAACATCCTTTCAACTGAAAATATaGAAGCCCCCTCGGTCCAACAGTGAGACGGAGCTG +
Preference number: 3 (lower is better)
Translates to: SLHQLTSFQLKI*KPPRSNSETEL
Trigger: CAGCTCCGTCTCACTGTTGGACCGAGGGGGCTTTCATATTTTCAGTTGAAAGGATGTTAACTGATGTAGCGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
3UTR TCA 72 bp AGCTTGAACAGGCTTTGGAGGAGCTTTGATCTCACATaGGAACCCGTCTCCTGTTTCATATGCGTTCAATCC +
Preference number: 3 (lower is better)
Translates to: SLNRLWRSFDLT*EPVSCFICVQS
Trigger: GGATTGAACGCATATGAAACAGGAGACGGGTTCTCATGTGAGATCAAAGCTCCTCCAAAGCCTGTTCAAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
3UTR TCA 72 bp AATCGCTTAGAGCTTGAACAGGCTTTGGAGGAGCTTTaGTCTCACATGAGAACCCGTCTCCTGTTTCATATG +
Preference number: 3 (lower is better)
Translates to: NRLELEQALEEL*SHMRTRLLFHM
Trigger: CATATGAAACAGGAGACGGGTTCTCATGTGAGATCAAAGCTCCTCCAAAGCCTGTTCAAGCTCTAAGCGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
3UTR TCA 72 bp CACTTTCTGCGTGATTTATTTCATCTCGGCATGAACTaGCAAACATACGAGGCTCTGCACTATTTATGCCCA +
Preference number: 3 (lower is better)
Translates to: HFLRDLFHLGMN*QTYEALHYLCP
Trigger: TGGGCATAAATAGTGCAGAGCCTCGTATGTTTGTCAGTTCATGCCGAGATGAAATAAATCACGCAGAAAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
3UTR TCA 72 bp CCGCTTTTTAGGAATATTTTATCTCGTTCCAGATTATaGAAGCGGCTGGGCATACAGAGTGGACTATCAAAG +
Preference number: 3 (lower is better)
Translates to: PLFRNILSRSRL*KRLGIQSGLSK
Trigger: CTTTGATAGTCCACTCTGTATGCCCAGCCGCTTTCATAATCTGGAACGAGATAAAATATTCCTAAAAAGCGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
3UTR TCA 72 bp ACTGGCACTTTCTGCGTGATTTATTTCATCTCGGCATaGACTGACAAACATACGAGGCTCTGCACTATTTAT +
Preference number: 3 (lower is better)
Translates to: TGTFCVIYFISA*TDKHTRLCTIY
Trigger: ATAAATAGTGCAGAGCCTCGTATGTTTGTCAGTTCATGCCGAGATGAAATAAATCACGCAGAAAGTGCCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
3UTR CCA 72 bp TCGTTCCAGATTATGAAAGCGGCTGGGCATACAGAGTaGACTATCAAAGATTGCTTTTTAGATAGACAAGCA +
Preference number: 3 (lower is better)
Translates to: SFQIMKAAGHTE*TIKDCFLDRQA
Trigger: TGCTTGTCTATCTAAAAAGCAATCTTTGATAGTCCACTCTGTATGCCCAGCCGCTTTCATAATCTGGAACGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
3UTR TCA 72 bp ATTTCCAAATCGTTTACAGGAAGTTACCTAAGAGACTaGCAGATTCAACGGCTGCTACCAGAATTACTGAAG +
Preference number: 3 (lower is better)
Translates to: ISKSFTGSYLRD*QIQRLLPELLK
Trigger: CTTCAGTAATTCTGGTAGCAGCCGTTGAATCTGTCAGTCTCTTAGGTAACTTCCTGTAAACGATTTGGAAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
3UTR CCA 72 bp GGAATATTTTATCTCGTTCCAGATTATGAAAGCGGCTaGGCATACAGAGTGGACTATCAAAGATTGCTTTTT +
Preference number: 3 (lower is better)
Translates to: GIFYLVPDYESG*AYRVDYQRLLF
Trigger: AAAAAGCAATCTTTGATAGTCCACTCTGTATGCCCAGCCGCTTTCATAATCTGGAACGAGATAAAATATTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
3UTR GCA 72 bp CCAACTGATTTGTTTTTAATCCTCATACCCTGTCAATaGAGTGAGCCTCGTGTTAATTCTATTAGGGTATTT +
Preference number: 3 (lower is better)
Translates to: PTDLFLILIPCQ*SEPRVNSIRVF
Trigger: AAATACCCTAATAGAATTAACACGAGGCTCACTGCATTGACAGGGTATGAGGATTAAAAACAAATCAGTTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
3UTR TCA 72 bp TATACTCCTATAAAAGGCCAATCAAGTCAGGCGATATaGAGTCTGTTTTTCTTTCCCAAGATGATTAACCAA +
Preference number: 3 (lower is better)
Translates to: YTPIKGQSSQAI*SLFFFPKMINQ
Trigger: TTGGTTAATCATCTTGGGAAAGAAAAACAGACTTCATATCGCCTGACTTGATTGGCCTTTTATAGGAGTATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR GCA 90 bp TCCTCCTCCGCGGGCCCAAAGGGACCTGGGCCCCGCAAACCCCTGCCGAGGGAGAGCGCTCGCGGCTGCTaGTGCACGGGCACTCCTGCC +
Preference number: 4 (lower is better)
Translates to: SSSAGPKGPGPRKPLPRESARGC*CTGTPA
Trigger: GGCAGGAGTGCCCGTGCAGCAGCAGCCGCGAGCGCT...CTCCCTCGGCAGGGGTTTGCGGGGCCCAGGTCCCTTTGGGCCCGCGGAGGAGGA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR TCA 90 bp TTGAGGGTCCCAGGCTCCTGCGCACAGCCTCGGTGCTCTGCGGGGTTCGGGACAGGTATCGGGACACGCTaGCCCCGCTCGGCCCCGCCG +
Preference number: 4 (lower is better)
Translates to: LRVPGSCAQPRCSAGFGTGIGTR*PRSAPP
Trigger: CGGCGGGGCCGAGCGGGGTCAGCGTGTCCCGATACC...TGTCCCGAACCCCGCAGAGCACCGAGGCTGTGCGCAGGAGCCTGGGACCCTCAA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR GCA 90 bp TCCTCCTCCGCGGGCCCAAAGGGACCTGGGCCCCGCAAACCCCTGCCGAGGGAGGCTCGCGGCTGCTGCTaGACGGGCACTCCTGCCACT +
Preference number: 4 (lower is better)
Translates to: SSSAGPKGPGPRKPLPREARGCC*TGTPAT
Trigger: AGTGGCAGGAGTGCCCGTGCAGCAGCAGCCGCGAGC...CTCCCTCGGCAGGGGTTTGCGGGGCCCAGGTCCCTTTGGGCCCGCGGAGGAGGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR GCA 90 bp TCCTCCTCCGCGGGCCCAAAGGGACCTGGGCCCCGCAAACCCCTGCCGAGGGAGGGGCCGGCTGCAGGCTaGCTCAGGAACCCCCACTGT +
Preference number: 4 (lower is better)
Translates to: SSSAGPKGPGPRKPLPREGPAAG*LRNPHC
Trigger: ACAGTGGGGGTTCCTGAGGCAGCCTGCAGCCGGCCC...CTCCCTCGGCAGGGGTTTGCGGGGCCCAGGTCCCTTTGGGCCCGCGGAGGAGGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR CCA 90 bp TCCTCCTCCGCGGGCCCAAAGGGACCTGGGCCCCGCAAACCCCTGCCGAGGGAGTCCAAACCACCAGCGTaGCCAGCGGCCCCGACTCCC +
Preference number: 4 (lower is better)
Translates to: SSSAGPKGPGPRKPLPRESKPPA*PAAPTP
Trigger: GGGAGTCGGGGCCGCTGGCCACGCTGGTGGTTTGGA...CTCCCTCGGCAGGGGTTTGCGGGGCCCAGGTCCCTTTGGGCCCGCGGAGGAGGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR GCA 90 bp TTGAGGGTCCCAGGCTCCTGCGCACAGCCTCGGTGCTCTGCGGGGTTCGGGACACCTGCGAGCGGGAGCTaGTCCTCCGACCCGCAGCGG +
Preference number: 4 (lower is better)
Translates to: LRVPGSCAQPRCSAGFGTPASGS*SSDPQR
Trigger: CCGCTGCGGGTCGGAGGAGCAGCTCCCGCTCGCAGG...TGTCCCGAACCCCGCAGAGCACCGAGGCTGTGCGCAGGAGCCTGGGACCCTCAA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320248.4
CDS-3UTR GCA 90 bp TCCTCCTCCGCGGGCCCAAAGGGACCTGGGCCCCGCAAACCCCTGCCGAGGGAGGAGCACCTGGGGCTTTaGTGCCGGGCCCCACAGGAA +
Preference number: 4 (lower is better)
Translates to: SSSAGPKGPGPRKPLPREEHLGL*CRAPQE
Trigger: TTCCTGTGGGGCCCGGCAGCAAAGCCCCAGGTGCTC...CTCCCTCGGCAGGGGTTTGCGGGGCCCAGGTCCCTTTGGGCCCGCGGAGGAGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR CCA 90 bp TCCTCCTCCGCGGGCCCAAAGGGACCTGGGCCCCGCAAACCCCTGCCGAGGGAGAAGCCGCTGTGCTCCTaGAGGCTGTCCTCGCTCACG +
Preference number: 4 (lower is better)
Translates to: SSSAGPKGPGPRKPLPREKPLCS*RLSSLT
Trigger: CGTGAGCGAGGACAGCCTCCAGGAGCACAGCGGCTT...CTCCCTCGGCAGGGGTTTGCGGGGCCCAGGTCCCTTTGGGCCCGCGGAGGAGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR CCA 90 bp TTGAGGGTCCCAGGCTCCTGCGCACAGCCTCGGTGCTCTGCGGGGTTCGGGACACCACCGCGTGCTCCATaGCCGGGCTGTGCTGCGCTG +
Preference number: 4 (lower is better)
Translates to: LRVPGSCAQPRCSAGFGTPPRAP*PGCAAL
Trigger: CAGCGCAGCACAGCCCGGCCATGGAGCACGCGGTGG...TGTCCCGAACCCCGCAGAGCACCGAGGCTGTGCGCAGGAGCCTGGGACCCTCAA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR CCA 90 bp TCCTCCTCCGCGGGCCCAAAGGGACCTGGGCCCCGCAAACCCCTGCCGAGGGAGACGGGCTCCACTGCTTaGCCAGGCAGTGGTATCGGG +
Preference number: 4 (lower is better)
Translates to: SSSAGPKGPGPRKPLPRETGSTA*PGSGIG
Trigger: CCCGATACCACTGCCTGGCCAAGCAGTGGAGCCCGT...CTCCCTCGGCAGGGGTTTGCGGGGCCCAGGTCCCTTTGGGCCCGCGGAGGAGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR CCA 90 bp TTGAGGGTCCCAGGCTCCTGCGCACAGCCTCGGTGCTCTGCGGGGTTCGGGACAGGGCCCAAAGGGACCTaGGCCCCGCAAACCCCTGCC +
Preference number: 4 (lower is better)
Translates to: LRVPGSCAQPRCSAGFGTGPKGT*APQTPA
Trigger: GGCAGGGGTTTGCGGGGCCCAGGTCCCTTTGGGCCC...TGTCCCGAACCCCGCAGAGCACCGAGGCTGTGCGCAGGAGCCTGGGACCCTCAA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR TCA 90 bp TCCTCCTCCGCGGGCCCAAAGGGACCTGGGCCCCGCAAACCCCTGCCGAGGGAGGATCGAAGCGGTAGATaGAGCCGTCGAGAGCCACCA +
Preference number: 4 (lower is better)
Translates to: SSSAGPKGPGPRKPLPREDRSGR*SRREPP
Trigger: TGGTGGCTCTCGACGGCTTCATCTACCGCTTCGATC...CTCCCTCGGCAGGGGTTTGCGGGGCCCAGGTCCCTTTGGGCCCGCGGAGGAGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR GCA 90 bp TCTGTCAAGGGACCCATCCGCACACCTCCTGGGTCTCAAGGCATCCACCCCCAGAGACTGCAGGGTGTCTaGGCCGGGGACGCGGCGCCC +
Preference number: 4 (lower is better)
Translates to: SVKGPIRTPPGSQGIHPQRLQGV*AGDAAP
Trigger: GGGCGCCGCGTCCCCGGCGCAGACACCCTGCAGTCT...CTGGGGGTGGATGCCTTGAGACCCAGGAGGTGTGCGGATGGGTCCCTTGACAGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR GCA 90 bp TCCTCCTCCGCGGGCCCAAAGGGACCTGGGCCCCGCAAACCCCTGCCGAGGGAGAGGCGTGACCCTCTCTaGGTGCTTCCCCCGATAGTT +
Preference number: 4 (lower is better)
Translates to: SSSAGPKGPGPRKPLPRERRDPL*VLPPIV
Trigger: AACTATCGGGGGAAGCACGCAGAGAGGGTCACGCCT...CTCCCTCGGCAGGGGTTTGCGGGGCCCAGGTCCCTTTGGGCCCGCGGAGGAGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR GCA 90 bp TCCTCCTCCGCGGGCCCAAAGGGACCTGGGCCCCGCAAACCCCTGCCGAGGGAGTGGGGCATCAGCCGTTaGCAGGCAGTCTCAGCAATG +
Preference number: 4 (lower is better)
Translates to: SSSAGPKGPGPRKPLPREWGISR*QAVSAM
Trigger: CATTGCTGAGACTGCCTGGCAACGGCTGATGCCCCA...CTCCCTCGGCAGGGGTTTGCGGGGCCCAGGTCCCTTTGGGCCCGCGGAGGAGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR CCA 90 bp TTGAGGGTCCCAGGCTCCTGCGCACAGCCTCGGTGCTCTGCGGGGTTCGGGACAGGACCTCGTAGCAGTTaGCCAGGCTCAGCTGCGGCC +
Preference number: 4 (lower is better)
Translates to: LRVPGSCAQPRCSAGFGTGPRSS*PGSAAA
Trigger: GGCCGCAGCTGAGCCTGGCCAACTGCTACGAGGTCC...TGTCCCGAACCCCGCAGAGCACCGAGGCTGTGCGCAGGAGCCTGGGACCCTCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR GCA 90 bp TCTGTCAAGGGACCCATCCGCACACCTCCTGGGTCTCAAGGCATCCACCCCCAGGCGCCTCGCCGCGGCTaGCGCTCAGATCGAAGCGGT +
Preference number: 4 (lower is better)
Translates to: SVKGPIRTPPGSQGIHPQAPRRG*RSDRSG
Trigger: ACCGCTTCGATCTGAGCGGCAGCCGCGGCGAGGCGC...CTGGGGGTGGATGCCTTGAGACCCAGGAGGTGTGCGGATGGGTCCCTTGACAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR TCA 90 bp TCCTCCTCCGCGGGCCCAAAGGGACCTGGGCCCCGCAAACCCCTGCCGAGGGAGTCTCTCTCTGCAGCCTaGGTGACTAGCTATCCCTCT +
Preference number: 4 (lower is better)
Translates to: SSSAGPKGPGPRKPLPRESLSAA*VTSYPS
Trigger: AGAGGGATAGCTAGTCACTCAGGCTGCAGAGAGAGA...CTCCCTCGGCAGGGGTTTGCGGGGCCCAGGTCCCTTTGGGCCCGCGGAGGAGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR GCA 90 bp TCTGTCAAGGGACCCATCCGCACACCTCCTGGGTCTCAAGGCATCCACCCCCAGAGCTCGTTCAGCCGCTaGCGCTTGGCCGCGCTCAGG +
Preference number: 4 (lower is better)
Translates to: SVKGPIRTPPGSQGIHPQSSFSR*RLAALR
Trigger: CCTGAGCGCGGCCAAGCGGCAGCGGCTGAACGAGCT...CTGGGGGTGGATGCCTTGAGACCCAGGAGGTGTGCGGATGGGTCCCTTGACAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR CCA 90 bp TTGAGGGTCCCAGGCTCCTGCGCACAGCCTCGGTGCTCTGCGGGGTTCGGGACAACTGGTCCTGTGTGCTaGTCTCAGGAGCTCTCCCCG +
Preference number: 4 (lower is better)
Translates to: LRVPGSCAQPRCSAGFGTTGPVC*SQELSP
Trigger: CGGGGAGAGCTCCTGAGACCAGCACACAGGACCAGT...TGTCCCGAACCCCGCAGAGCACCGAGGCTGTGCGCAGGAGCCTGGGACCCTCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR CCA 90 bp TTGAGGGTCCCAGGCTCCTGCGCACAGCCTCGGTGCTCTGCGGGGTTCGGGACACGCAGCCTGCAGGTCTaGCCAAGGTCGAGCCTTACT +
Preference number: 4 (lower is better)
Translates to: LRVPGSCAQPRCSAGFGTRSLQV*PRSSLT
Trigger: AGTAAGGCTCGACCTTGGCCAGACCTGCAGGCTGCG...TGTCCCGAACCCCGCAGAGCACCGAGGCTGTGCGCAGGAGCCTGGGACCCTCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR CCA 90 bp TCCTCCTCCGCGGGCCCAAAGGGACCTGGGCCCCGCAAACCCCTGCCGAGGGAGCACGAGTCAGACATTTaGAAATGCCCCGGCATACGG +
Preference number: 4 (lower is better)
Translates to: SSSAGPKGPGPRKPLPREHESDI*KCPGIR
Trigger: CCGTATGCCGGGGCATTTCCAAATGTCTGACTCGTG...CTCCCTCGGCAGGGGTTTGCGGGGCCCAGGTCCCTTTGGGCCCGCGGAGGAGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR GCA 90 bp TTGAGGGTCCCAGGCTCCTGCGCACAGCCTCGGTGCTCTGCGGGGTTCGGGACAGACTGCGGTTGTTTCTaGAGCCTGGGTGACCAGGTG +
Preference number: 4 (lower is better)
Translates to: LRVPGSCAQPRCSAGFGTDCGCF*SLGDQV
Trigger: CACCTGGTCACCCAGGCTGCAGAAACAACCGCAGTC...TGTCCCGAACCCCGCAGAGCACCGAGGCTGTGCGCAGGAGCCTGGGACCCTCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR GCA 90 bp AAACGCTGGAAAGCCATGGGAACCGCACAGGACTGTGCAACCACCCCCATCCAACAGGGGGCCACCGCGTaGTCCATGGCCGGGCTGTGC +
Preference number: 4 (lower is better)
Translates to: KRWKAMGTAQDCATTPIQQGATA*SMAGLC
Trigger: GCACAGCCCGGCCATGGAGCACGCGGTGGCCCCCTG...TTGGATGGGGGTGGTTGCACAGTCCTGTGCGGTTCCCATGGCTTTCCAGCGTTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR GCA 90 bp CACTGTACCCTGAGGCTGACCCTTTGGATCCCACAGCCTTCTCTGTGTCCTGTCGGGACGCGCCGAGACTaGAGGGTGTCTGCGCCGGGG +
Preference number: 4 (lower is better)
Translates to: HCTLRLTLWIPQPSLCPVGTRRD*RVSAPG
Trigger: CCCCGGCGCAGACACCCTGCAGTCTCGGCGCGTCCC...GACAGGACACAGAGAAGGCTGTGGGATCCAAAGGGTCAGCCTCAGGGTACAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR GCA 90 bp AAACGCTGGAAAGCCATGGGAACCGCACAGGACTGTGCAACCACCCCCATCCAACTGCACGGGCACTCCTaGCACTCGTCGCGCCGCGGG +
Preference number: 4 (lower is better)
Translates to: KRWKAMGTAQDCATTPIQLHGHS*HSSRRG
Trigger: CCCGCGGCGCGACGAGTGGCAGGAGTGCCCGTGCAG...TTGGATGGGGGTGGTTGCACAGTCCTGTGCGGTTCCCATGGCTTTCCAGCGTTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR GCA 90 bp TCCTCCTCCGCGGGCCCAAAGGGACCTGGGCCCCGCAAACCCCTGCCGAGGGAGTACAGCAGAAGTCGGTaGCTCCACAGACTCAGAAAC +
Preference number: 4 (lower is better)
Translates to: SSSAGPKGPGPRKPLPREYSRSR*LHRLRN
Trigger: GTTTCTGAGTCTGTGGAGGCACCGACTTCTGCTGTA...CTCCCTCGGCAGGGGTTTGCGGGGCCCAGGTCCCTTTGGGCCCGCGGAGGAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR CCA 90 bp CACTGTACCCTGAGGCTGACCCTTTGGATCCCACAGCCTTCTCTGTGTCCTGTCCCTTCCCGGGCAGGCTaGAAGCGCCAGGTGCCCGCG +
Preference number: 4 (lower is better)
Translates to: HCTLRLTLWIPQPSLCPVPSRAG*KRQVPA
Trigger: CGCGGGCACCTGGCGCTTCCAGCCTGCCCGGGAAGG...GACAGGACACAGAGAAGGCTGTGGGATCCAAAGGGTCAGCCTCAGGGTACAGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR TCA 90 bp TTGAGGGTCCCAGGCTCCTGCGCACAGCCTCGGTGCTCTGCGGGGTTCGGGACAGTGTGTCCGACTTGCTaGACTTCTGAACCCCAGCCA +
Preference number: 4 (lower is better)
Translates to: LRVPGSCAQPRCSAGFGTVCPTC*TSEPQP
Trigger: TGGCTGGGGTTCAGAAGTTCAGCAAGTCGGACACAC...TGTCCCGAACCCCGCAGAGCACCGAGGCTGTGCGCAGGAGCCTGGGACCCTCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR GCA 90 bp TCTCAGCAATGCCTCTGCCCTCCCTGCAGCAGTCCCAAAATGAAAGCCACACCTCAGGGGGCCACCGCGTaGTCCATGGCCGGGCTGTGC +
Preference number: 4 (lower is better)
Translates to: SQQCLCPPCSSPKMKATPQGATA*SMAGLC
Trigger: GCACAGCCCGGCCATGGAGCACGCGGTGGCCCCCTG...AGGTGTGGCTTTCATTTTGGGACTGCTGCAGGGAGGGCAGAGGCATTGCTGAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR GCA 90 bp TCTCAGCAATGCCTCTGCCCTCCCTGCAGCAGTCCCAAAATGAAAGCCACACCTAGACTGCAGGGTGTCTaGGCCGGGGACGCGGCGCCC +
Preference number: 4 (lower is better)
Translates to: SQQCLCPPCSSPKMKATPRLQGV*AGDAAP
Trigger: GGGCGCCGCGTCCCCGGCGCAGACACCCTGCAGTCT...AGGTGTGGCTTTCATTTTGGGACTGCTGCAGGGAGGGCAGAGGCATTGCTGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR GCA 90 bp CACTGTACCCTGAGGCTGACCCTTTGGATCCCACAGCCTTCTCTGTGTCCTGTCGCTGAGGCGAGGGACTaGGGCGGGGACTCTTCCCCG +
Preference number: 4 (lower is better)
Translates to: HCTLRLTLWIPQPSLCPVAEARD*GGDSSP
Trigger: CGGGGAAGAGTCCCCGCCGCAGTCCCTCGCCTCAGC...GACAGGACACAGAGAAGGCTGTGGGATCCAAAGGGTCAGCCTCAGGGTACAGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR GCA 90 bp AAACGCTGGAAAGCCATGGGAACCGCACAGGACTGTGCAACCACCCCCATCCAATTGGCCAGGCTCAGCTaGGGCCCCACGGCGTCGGTG +
Preference number: 4 (lower is better)
Translates to: KRWKAMGTAQDCATTPIQLARLS*GPTASV
Trigger: CACCGACGCCGTGGGGCCGCAGCTGAGCCTGGCCAA...TTGGATGGGGGTGGTTGCACAGTCCTGTGCGGTTCCCATGGCTTTCCAGCGTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR GCA 90 bp TCCTCCTCCGCGGGCCCAAAGGGACCTGGGCCCCGCAAACCCCTGCCGAGGGAGAAAAAGCAAAAACACTaGTCATGGCGTGGCAGGTCC +
Preference number: 4 (lower is better)
Translates to: SSSAGPKGPGPRKPLPREKKQKH*SWRGRS
Trigger: GGACCTGCCACGCCATGAGCAGTGTTTTTGCTTTTT...CTCCCTCGGCAGGGGTTTGCGGGGCCCAGGTCCCTTTGGGCCCGCGGAGGAGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR CCA 90 bp CACTGTACCCTGAGGCTGACCCTTTGGATCCCACAGCCTTCTCTGTGTCCTGTCCGGCAGAGGGGGCGGTaGACAGGCCTCTCCGCCTCT +
Preference number: 4 (lower is better)
Translates to: HCTLRLTLWIPQPSLCPVRQRGR*TGLSAS
Trigger: AGAGGCGGAGAGGCCTGTCCACCGCCCCCTCTGCCG...GACAGGACACAGAGAAGGCTGTGGGATCCAAAGGGTCAGCCTCAGGGTACAGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320248.4
CDS-3UTR CCA 90 bp TCCTCCTCCGCGGGCCCAAAGGGACCTGGGCCCCGCAAACCCCTGCCGAGGGAGCTTTTCTCTGTTTCATaGGTGCAAACCCTAGCGGCT +
Preference number: 4 (lower is better)
Translates to: SSSAGPKGPGPRKPLPRELFSVS*VQTLAA
Trigger: AGCCGCTAGGGTTTGCACCCATGAAACAGAGAAAAG...CTCCCTCGGCAGGGGTTTGCGGGGCCCAGGTCCCTTTGGGCCCGCGGAGGAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR TCA 90 bp AAACGCTGGAAAGCCATGGGAACCGCACAGGACTGTGCAACCACCCCCATCCAATCGCGGCGACCTACTTaGGGGTCCCAGGCTCCTGCG +
Preference number: 4 (lower is better)
Translates to: KRWKAMGTAQDCATTPIQSRRPT*GSQAPA
Trigger: CGCAGGAGCCTGGGACCCTCAAGTAGGTCGCCGCGA...TTGGATGGGGGTGGTTGCACAGTCCTGTGCGGTTCCCATGGCTTTCCAGCGTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR TCA 90 bp TCCTCCTCCGCGGGCCCAAAGGGACCTGGGCCCCGCAAACCCCTGCCGAGGGAGAGTTACCTAAGAGACTaGCAGATTCAACGGCTGCTA +
Preference number: 4 (lower is better)
Translates to: SSSAGPKGPGPRKPLPRESYLRD*QIQRLL
Trigger: TAGCAGCCGTTGAATCTGTCAGTCTCTTAGGTAACT...CTCCCTCGGCAGGGGTTTGCGGGGCCCAGGTCCCTTTGGGCCCGCGGAGGAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR GCA 90 bp TTGAGGGTCCCAGGCTCCTGCGCACAGCCTCGGTGCTCTGCGGGGTTCGGGACATTGTGGCTACACAACTaGAAGGTCACGGGGAGGACA +
Preference number: 4 (lower is better)
Translates to: LRVPGSCAQPRCSAGFGTLWLHN*KVTGRT
Trigger: TGTCCTCCCCGTGACCTTGCAGTTGTGTAGCCACAA...TGTCCCGAACCCCGCAGAGCACCGAGGCTGTGCGCAGGAGCCTGGGACCCTCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR GCA 90 bp AAACGCTGGAAAGCCATGGGAACCGCACAGGACTGTGCAACCACCCCCATCCAAGTCAGGCTCACTCCCTaGACCCGCAGCACGTCCCGC +
Preference number: 4 (lower is better)
Translates to: KRWKAMGTAQDCATTPIQVRLTP*TRSTSR
Trigger: GCGGGACGTGCTGCGGGTGCAGGGAGTGAGCCTGAC...TTGGATGGGGGTGGTTGCACAGTCCTGTGCGGTTCCCATGGCTTTCCAGCGTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR GCA 90 bp ATCCCGAAGTTCCAAATCCAGCTCTACAAAGCTGCAGGAAGCAGTGCGGAGTGGCTGCACGGGCACTCCTaGCACTCGTCGCGCCGCGGG +
Preference number: 4 (lower is better)
Translates to: IPKFQIQLYKAAGSSAEWLHGHS*HSSRRG
Trigger: CCCGCGGCGCGACGAGTGGCAGGAGTGCCCGTGCAG...CCACTCCGCACTGCTTCCTGCAGCTTTGTAGAGCTGGATTTGGAACTTCGGGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR GCA 90 bp AAACGCTGGAAAGCCATGGGAACCGCACAGGACTGTGCAACCACCCCCATCCAAGCTCGCGGCTGCTGCTaGACGGGCACTCCTGCCACT +
Preference number: 4 (lower is better)
Translates to: KRWKAMGTAQDCATTPIQARGCC*TGTPAT
Trigger: AGTGGCAGGAGTGCCCGTGCAGCAGCAGCCGCGAGC...TTGGATGGGGGTGGTTGCACAGTCCTGTGCGGTTCCCATGGCTTTCCAGCGTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR CCA 90 bp TCTGTCAAGGGACCCATCCGCACACCTCCTGGGTCTCAAGGCATCCACCCCCAGCGCAGCCTGCAGGTCTaGCCAAGGTCGAGCCTTACT +
Preference number: 4 (lower is better)
Translates to: SVKGPIRTPPGSQGIHPQRSLQV*PRSSLT
Trigger: AGTAAGGCTCGACCTTGGCCAGACCTGCAGGCTGCG...CTGGGGGTGGATGCCTTGAGACCCAGGAGGTGTGCGGATGGGTCCCTTGACAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR CCA 90 bp CACTGTACCCTGAGGCTGACCCTTTGGATCCCACAGCCTTCTCTGTGTCCTGTCGTGACAGGGAGCACCTaGGGCTTTGCTGCCGGGCCC +
Preference number: 4 (lower is better)
Translates to: HCTLRLTLWIPQPSLCPVVTGST*GFAAGP
Trigger: GGGCCCGGCAGCAAAGCCCCAGGTGCTCCCTGTCAC...GACAGGACACAGAGAAGGCTGTGGGATCCAAAGGGTCAGCCTCAGGGTACAGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR TCA 90 bp ATCCCGAAGTTCCAAATCCAGCTCTACAAAGCTGCAGGAAGCAGTGCGGAGTGGCGTAGCGCTCCACGCTaGGCAGGCACTCGCCGCCCA +
Preference number: 4 (lower is better)
Translates to: IPKFQIQLYKAAGSSAEWRSAPR*AGTRRP
Trigger: TGGGCGGCGAGTGCCTGCTCAGCGTGGAGCGCTACG...CCACTCCGCACTGCTTCCTGCAGCTTTGTAGAGCTGGATTTGGAACTTCGGGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR TCA 90 bp TTGAGGGTCCCAGGCTCCTGCGCACAGCCTCGGTGCTCTGCGGGGTTCGGGACATATCCCCTCAGTTCATaGGTAACCATGGGCAAGCAG +
Preference number: 4 (lower is better)
Translates to: LRVPGSCAQPRCSAGFGTYPLSS*VTMGKQ
Trigger: CTGCTTGCCCATGGTTACTCATGAACTGAGGGGATA...TGTCCCGAACCCCGCAGAGCACCGAGGCTGTGCGCAGGAGCCTGGGACCCTCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR TCA 90 bp TCCTCCTCCGCGGGCCCAAAGGGACCTGGGCCCCGCAAACCCCTGCCGAGGGAGTCAAGTCAGGCGATATaGAGTCTGTTTTTCTTTCCC +
Preference number: 4 (lower is better)
Translates to: SSSAGPKGPGPRKPLPRESSQAI*SLFFFP
Trigger: GGGAAAGAAAAACAGACTTCATATCGCCTGACTTGA...CTCCCTCGGCAGGGGTTTGCGGGGCCCAGGTCCCTTTGGGCCCGCGGAGGAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR GCA 90 bp CACTGTACCCTGAGGCTGACCCTTTGGATCCCACAGCCTTCTCTGTGTCCTGTCCACCTGGGGCTTTGCTaGCGGGCCCCACAGGAAGCT +
Preference number: 4 (lower is better)
Translates to: HCTLRLTLWIPQPSLCPVHLGLC*RAPQEA
Trigger: AGCTTCCTGTGGGGCCCGGCAGCAAAGCCCCAGGTG...GACAGGACACAGAGAAGGCTGTGGGATCCAAAGGGTCAGCCTCAGGGTACAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR CCA 90 bp ATCCCGAAGTTCCAAATCCAGCTCTACAAAGCTGCAGGAAGCAGTGCGGAGTGGCCACCGCGTGCTCCATaGCCGGGCTGTGCTGCGCTG +
Preference number: 4 (lower is better)
Translates to: IPKFQIQLYKAAGSSAEWPPRAP*PGCAAL
Trigger: CAGCGCAGCACAGCCCGGCCATGGAGCACGCGGTGG...CCACTCCGCACTGCTTCCTGCAGCTTTGTAGAGCTGGATTTGGAACTTCGGGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR CCA 90 bp TTGAGGGTCCCAGGCTCCTGCGCACAGCCTCGGTGCTCTGCGGGGTTCGGGACAGCCTTTTCAGACATTTaGAAAGGCCCCTGCGTATGG +
Preference number: 4 (lower is better)
Translates to: LRVPGSCAQPRCSAGFGTAFSDI*KGPCVW
Trigger: CCATACGCAGGGGCCTTTCCAAATGTCTGAAAAGGC...TGTCCCGAACCCCGCAGAGCACCGAGGCTGTGCGCAGGAGCCTGGGACCCTCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR TCA 90 bp TCTGTCAAGGGACCCATCCGCACACCTCCTGGGTCTCAAGGCATCCACCCCCAGCCCAGAAAGTCTTGGTaGATGGATCTCCAGCTGGCG +
Preference number: 4 (lower is better)
Translates to: SVKGPIRTPPGSQGIHPQPRKSW*MDLQLA
Trigger: CGCCAGCTGGAGATCCATTCACCAAGACTTTCTGGG...CTGGGGGTGGATGCCTTGAGACCCAGGAGGTGTGCGGATGGGTCCCTTGACAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR TCA 90 bp ATCCCGAAGTTCCAAATCCAGCTCTACAAAGCTGCAGGAAGCAGTGCGGAGTGGAAGCGAAAGCGGCCCTaGGAGCGTCCTCGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: IPKFQIQLYKAAGSSAEWKRKRP*ERPRGS
Trigger: GGAGCCCCGAGGACGCTCTCAGGGCCGCTTTCGCTT...CCACTCCGCACTGCTTCCTGCAGCTTTGTAGAGCTGGATTTGGAACTTCGGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR TCA 90 bp TTGAGGGTCCCAGGCTCCTGCGCACAGCCTCGGTGCTCTGCGGGGTTCGGGACATACTCTTTTTGGAGTTaGGCCAACCAAAGCGAGCAC +
Preference number: 4 (lower is better)
Translates to: LRVPGSCAQPRCSAGFGTYSFWS*ANQSEH
Trigger: GTGCTCGCTTTGGTTGGCTCAACTCCAAAAAGAGTA...TGTCCCGAACCCCGCAGAGCACCGAGGCTGTGCGCAGGAGCCTGGGACCCTCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR TCA 90 bp CACTGTACCCTGAGGCTGACCCTTTGGATCCCACAGCCTTCTCTGTGTCCTGTCCCCTCGGTCCAACAGTaGGACGGAGCTGCTCTAGGC +
Preference number: 4 (lower is better)
Translates to: HCTLRLTLWIPQPSLCPVPSVQQ*DGAALG
Trigger: GCCTAGAGCAGCTCCGTCTCACTGTTGGACCGAGGG...GACAGGACACAGAGAAGGCTGTGGGATCCAAAGGGTCAGCCTCAGGGTACAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR GCA 90 bp TCTCAGCAATGCCTCTGCCCTCCCTGCAGCAGTCCCAAAATGAAAGCCACACCTCCCGGTTCCGCAGCCTaGAGGTCTGGCCAAGGTCGA +
Preference number: 4 (lower is better)
Translates to: SQQCLCPPCSSPKMKATPPGSAA*RSGQGR
Trigger: TCGACCTTGGCCAGACCTGCAGGCTGCGGAACCGGG...AGGTGTGGCTTTCATTTTGGGACTGCTGCAGGGAGGGCAGAGGCATTGCTGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR GCA 90 bp ATCCCGAAGTTCCAAATCCAGCTCTACAAAGCTGCAGGAAGCAGTGCGGAGTGGAGCTCGTTCAGCCGCTaGCGCTTGGCCGCGCTCAGG +
Preference number: 4 (lower is better)
Translates to: IPKFQIQLYKAAGSSAEWSSFSR*RLAALR
Trigger: CCTGAGCGCGGCCAAGCGGCAGCGGCTGAACGAGCT...CCACTCCGCACTGCTTCCTGCAGCTTTGTAGAGCTGGATTTGGAACTTCGGGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR GCA 90 bp TTGAGGGTCCCAGGCTCCTGCGCACAGCCTCGGTGCTCTGCGGGGTTCGGGACAACAGATCACAACAGCTaGCCTGAACTTGGCCTTCAA +
Preference number: 4 (lower is better)
Translates to: LRVPGSCAQPRCSAGFGTTDHNS*PELGLQ
Trigger: TTGAAGGCCAAGTTCAGGGCAGCTGTTGTGATCTGT...TGTCCCGAACCCCGCAGAGCACCGAGGCTGTGCGCAGGAGCCTGGGACCCTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR CCA 90 bp TTGAGGGTCCCAGGCTCCTGCGCACAGCCTCGGTGCTCTGCGGGGTTCGGGACAACACCTTGGAGGGTGTaGCTTTTCTCTGTTTCATGG +
Preference number: 4 (lower is better)
Translates to: LRVPGSCAQPRCSAGFGTTPWRV*LFSVSW
Trigger: CCATGAAACAGAGAAAAGCCACACCCTCCAAGGTGT...TGTCCCGAACCCCGCAGAGCACCGAGGCTGTGCGCAGGAGCCTGGGACCCTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR TCA 90 bp TTGAGGGTCCCAGGCTCCTGCGCACAGCCTCGGTGCTCTGCGGGGTTCGGGACATTTAACACCGTGTCTTaGAAAGAGTCCCCTTATGGG +
Preference number: 4 (lower is better)
Translates to: LRVPGSCAQPRCSAGFGTFNTVS*KESPYG
Trigger: CCCATAAGGGGACTCTTTTCAAGACACGGTGTTAAA...TGTCCCGAACCCCGCAGAGCACCGAGGCTGTGCGCAGGAGCCTGGGACCCTCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR TCA 90 bp TTGAGGGTCCCAGGCTCCTGCGCACAGCCTCGGTGCTCTGCGGGGTTCGGGACAGACTTGCTGAACTTCTaGACCCCAGCCACTTTAAAT +
Preference number: 4 (lower is better)
Translates to: LRVPGSCAQPRCSAGFGTDLLNF*TPATLN
Trigger: ATTTAAAGTGGCTGGGGTTCAGAAGTTCAGCAAGTC...TGTCCCGAACCCCGCAGAGCACCGAGGCTGTGCGCAGGAGCCTGGGACCCTCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR TCA 90 bp TCTCAGCAATGCCTCTGCCCTCCCTGCAGCAGTCCCAAAATGAAAGCCACACCTCCCTCGGTCCAACAGTaGGACGGAGCTGCTCTAGGC +
Preference number: 4 (lower is better)
Translates to: SQQCLCPPCSSPKMKATPPSVQQ*DGAALG
Trigger: GCCTAGAGCAGCTCCGTCTCACTGTTGGACCGAGGG...AGGTGTGGCTTTCATTTTGGGACTGCTGCAGGGAGGGCAGAGGCATTGCTGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR TCA 90 bp TCCTCCTCCGCGGGCCCAAAGGGACCTGGGCCCCGCAAACCCCTGCCGAGGGAGGAAATTCAAGACAACTaGAACAACTGCAGATTTCCA +
Preference number: 4 (lower is better)
Translates to: SSSAGPKGPGPRKPLPREEIQDN*NNCRFP
Trigger: TGGAAATCTGCAGTTGTTTCAGTTGTCTTGAATTTC...CTCCCTCGGCAGGGGTTTGCGGGGCCCAGGTCCCTTTGGGCCCGCGGAGGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR GCA 90 bp CACTGTACCCTGAGGCTGACCCTTTGGATCCCACAGCCTTCTCTGTGTCCTGTCACGCACGGGCTCCACTaGTTGGCCAGGCAGTGGTAT +
Preference number: 4 (lower is better)
Translates to: HCTLRLTLWIPQPSLCPVTHGLH*LARQWY
Trigger: ATACCACTGCCTGGCCAAGCAGTGGAGCCCGTGCGT...GACAGGACACAGAGAAGGCTGTGGGATCCAAAGGGTCAGCCTCAGGGTACAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR GCA 90 bp ATCCCGAAGTTCCAAATCCAGCTCTACAAAGCTGCAGGAAGCAGTGCGGAGTGGTGCGCACAGCCTCGGTaGTCTGCGGGGTTCGGGACA +
Preference number: 4 (lower is better)
Translates to: IPKFQIQLYKAAGSSAEWCAQPR*SAGFGT
Trigger: TGTCCCGAACCCCGCAGAGCACCGAGGCTGTGCGCA...CCACTCCGCACTGCTTCCTGCAGCTTTGTAGAGCTGGATTTGGAACTTCGGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR GCA 90 bp TTGAGGGTCCCAGGCTCCTGCGCACAGCCTCGGTGCTCTGCGGGGTTCGGGACACTCATACCCTGTCAATaGAGTGAGCCTCGTGTTAAT +
Preference number: 4 (lower is better)
Translates to: LRVPGSCAQPRCSAGFGTLIPCQ*SEPRVN
Trigger: ATTAACACGAGGCTCACTGCATTGACAGGGTATGAG...TGTCCCGAACCCCGCAGAGCACCGAGGCTGTGCGCAGGAGCCTGGGACCCTCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR GCA 90 bp ATCCCGAAGTTCCAAATCCAGCTCTACAAAGCTGCAGGAAGCAGTGCGGAGTGGGAGCACCTGGGGCTTTaGTGCCGGGCCCCACAGGAA +
Preference number: 4 (lower is better)
Translates to: IPKFQIQLYKAAGSSAEWEHLGL*CRAPQE
Trigger: TTCCTGTGGGGCCCGGCAGCAAAGCCCCAGGTGCTC...CCACTCCGCACTGCTTCCTGCAGCTTTGTAGAGCTGGATTTGGAACTTCGGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR GCA 90 bp AAACGCTGGAAAGCCATGGGAACCGCACAGGACTGTGCAACCACCCCCATCCAATCTCAGCAATGCCTCTaGCCTCCCTGCAGCAGTCCC +
Preference number: 4 (lower is better)
Translates to: KRWKAMGTAQDCATTPIQSQQCL*PPCSSP
Trigger: GGGACTGCTGCAGGGAGGGCAGAGGCATTGCTGAGA...TTGGATGGGGGTGGTTGCACAGTCCTGTGCGGTTCCCATGGCTTTCCAGCGTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR GCA 90 bp CACTGTACCCTGAGGCTGACCCTTTGGATCCCACAGCCTTCTCTGTGTCCTGTCTCTCAGCAATGCCTCTaGCCTCCCTGCAGCAGTCCC +
Preference number: 4 (lower is better)
Translates to: HCTLRLTLWIPQPSLCPVSQQCL*PPCSSP
Trigger: GGGACTGCTGCAGGGAGGGCAGAGGCATTGCTGAGA...GACAGGACACAGAGAAGGCTGTGGGATCCAAAGGGTCAGCCTCAGGGTACAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR GCA 90 bp TCCTCCTCCGCGGGCCCAAAGGGACCTGGGCCCCGCAAACCCCTGCCGAGGGAGGACCAGGAATATTTTTaGACCAACCTTTTTCCTACA +
Preference number: 4 (lower is better)
Translates to: SSSAGPKGPGPRKPLPREDQEYF*TNLFPT
Trigger: TGTAGGAAAAAGGTTGGTGCAAAAATATTCCTGGTC...CTCCCTCGGCAGGGGTTTGCGGGGCCCAGGTCCCTTTGGGCCCGCGGAGGAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR GCA 90 bp ATCCCGAAGTTCCAAATCCAGCTCTACAAAGCTGCAGGAAGCAGTGCGGAGTGGCCAGCACAGTGTCTGTaGCGGGTGCCCGAAGGCTGC +
Preference number: 4 (lower is better)
Translates to: IPKFQIQLYKAAGSSAEWPAQCL*RVPEGC
Trigger: GCAGCCTTCGGGCACCCGGCACAGACACTGTGCTGG...CCACTCCGCACTGCTTCCTGCAGCTTTGTAGAGCTGGATTTGGAACTTCGGGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR CCA 90 bp TCTCAGCAATGCCTCTGCCCTCCCTGCAGCAGTCCCAAAATGAAAGCCACACCTAAGCCGCTGTGCTCCTaGAGGCTGTCCTCGCTCACG +
Preference number: 4 (lower is better)
Translates to: SQQCLCPPCSSPKMKATPKPLCS*RLSSLT
Trigger: CGTGAGCGAGGACAGCCTCCAGGAGCACAGCGGCTT...AGGTGTGGCTTTCATTTTGGGACTGCTGCAGGGAGGGCAGAGGCATTGCTGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR CCA 90 bp CACTGTACCCTGAGGCTGACCCTTTGGATCCCACAGCCTTCTCTGTGTCCTGTCTGCTTGGCCAGGCAGTaGTATCGGGACACGCTGACC +
Preference number: 4 (lower is better)
Translates to: HCTLRLTLWIPQPSLCPVCLARQ*YRDTLT
Trigger: GGTCAGCGTGTCCCGATACCACTGCCTGGCCAAGCA...GACAGGACACAGAGAAGGCTGTGGGATCCAAAGGGTCAGCCTCAGGGTACAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR CCA 90 bp GCAGTGCGGAGTGGAGGGATGTTCCCAAGAGGAAGAATAAAACCGGAAGGAAAAGGGCCCAAAGGGACCTaGGCCCCGCAAACCCCTGCC +
Preference number: 4 (lower is better)
Translates to: AVRSGGMFPRGRIKPEGKGPKGT*APQTPA
Trigger: GGCAGGGGTTTGCGGGGCCCAGGTCCCTTTGGGCCC...TTTTCCTTCCGGTTTTATTCTTCCTCTTGGGAACATCCCTCCACTCCGCACTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR TCA 90 bp TCTCAGCAATGCCTCTGCCCTCCCTGCAGCAGTCCCAAAATGAAAGCCACACCTGATAGTGGTCGCTCATaGAGCAGTAGGCGGCGTCGC +
Preference number: 4 (lower is better)
Translates to: SQQCLCPPCSSPKMKATPDSGRS*SSRRRR
Trigger: GCGACGCCGCCTACTGCTTCATGAGCGACCACTATC...AGGTGTGGCTTTCATTTTGGGACTGCTGCAGGGAGGGCAGAGGCATTGCTGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR TCA 90 bp TCTCAGCAATGCCTCTGCCCTCCCTGCAGCAGTCCCAAAATGAAAGCCACACCTGCCGCGGGTCATACTTaGGCAGGCGATAGAAGAGGG +
Preference number: 4 (lower is better)
Translates to: SQQCLCPPCSSPKMKATPAAGHT*AGDRRG
Trigger: CCCTCTTCTATCGCCTGCTCAAGTATGACCCGCGGC...AGGTGTGGCTTTCATTTTGGGACTGCTGCAGGGAGGGCAGAGGCATTGCTGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR TCA 90 bp GCAGTGCGGAGTGGAGGGATGTTCCCAAGAGGAAGAATAAAACCGGAAGGAAAAAAGCGAAAGCGGCCCTaGGAGCGTCCTCGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: AVRSGGMFPRGRIKPEGKKRKRP*ERPRGS
Trigger: GGAGCCCCGAGGACGCTCTCAGGGCCGCTTTCGCTT...TTTTCCTTCCGGTTTTATTCTTCCTCTTGGGAACATCCCTCCACTCCGCACTGC
58% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR TCA 90 bp AAACGCTGGAAAGCCATGGGAACCGCACAGGACTGTGCAACCACCCCCATCCAATCCACTTGGCGTGTCTaGAGCTCCTGCCAGCACAGT +
Preference number: 4 (lower is better)
Translates to: KRWKAMGTAQDCATTPIQSTWRV*SSCQHS
Trigger: ACTGTGCTGGCAGGAGCTTCAGACACGCCAAGTGGA...TTGGATGGGGGTGGTTGCACAGTCCTGTGCGGTTCCCATGGCTTTCCAGCGTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR GCA 90 bp CACTGTACCCTGAGGCTGACCCTTTGGATCCCACAGCCTTCTCTGTGTCCTGTCGACACTGGTCCTGTGTaGTGGTCTCAGGAGCTCTCC +
Preference number: 4 (lower is better)
Translates to: HCTLRLTLWIPQPSLCPVDTGPV*WSQELS
Trigger: GGAGAGCTCCTGAGACCAGCACACAGGACCAGTGTC...GACAGGACACAGAGAAGGCTGTGGGATCCAAAGGGTCAGCCTCAGGGTACAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR GCA 90 bp AAACGCTGGAAAGCCATGGGAACCGCACAGGACTGTGCAACCACCCCCATCCAAAGGCGTGACCCTCTCTaGGTGCTTCCCCCGATAGTT +
Preference number: 4 (lower is better)
Translates to: KRWKAMGTAQDCATTPIQRRDPL*VLPPIV
Trigger: AACTATCGGGGGAAGCACGCAGAGAGGGTCACGCCT...TTGGATGGGGGTGGTTGCACAGTCCTGTGCGGTTCCCATGGCTTTCCAGCGTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR CCA 90 bp TCTGTCAAGGGACCCATCCGCACACCTCCTGGGTCTCAAGGCATCCACCCCCAGTGCAGCTTCCTTTGCTaGGATATCAGGTGTTTCCGC +
Preference number: 4 (lower is better)
Translates to: SVKGPIRTPPGSQGIHPQCSFLC*DIRCFR
Trigger: GCGGAAACACCTGATATCCCAGCAAAGGAAGCTGCA...CTGGGGGTGGATGCCTTGAGACCCAGGAGGTGTGCGGATGGGTCCCTTGACAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR CCA 90 bp CACTGTACCCTGAGGCTGACCCTTTGGATCCCACAGCCTTCTCTGTGTCCTGTCTCACGGGGAGGACACTaGTCCTGTGTGCTGGTCTCA +
Preference number: 4 (lower is better)
Translates to: HCTLRLTLWIPQPSLCPVSRGGH*SCVLVS
Trigger: TGAGACCAGCACACAGGACCAGTGTCCTCCCCGTGA...GACAGGACACAGAGAAGGCTGTGGGATCCAAAGGGTCAGCCTCAGGGTACAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR CCA 90 bp ATCCCGAAGTTCCAAATCCAGCTCTACAAAGCTGCAGGAAGCAGTGCGGAGTGGACGGGCTCCACTGCTTaGCCAGGCAGTGGTATCGGG +
Preference number: 4 (lower is better)
Translates to: IPKFQIQLYKAAGSSAEWTGSTA*PGSGIG
Trigger: CCCGATACCACTGCCTGGCCAAGCAGTGGAGCCCGT...CCACTCCGCACTGCTTCCTGCAGCTTTGTAGAGCTGGATTTGGAACTTCGGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR CCA 90 bp AAACGCTGGAAAGCCATGGGAACCGCACAGGACTGTGCAACCACCCCCATCCAAGGAAGCAGTGCGGAGTaGAGGGATGTTCCCAAGAGG +
Preference number: 4 (lower is better)
Translates to: KRWKAMGTAQDCATTPIQGSSAE*RDVPKR
Trigger: CCTCTTGGGAACATCCCTCCACTCCGCACTGCTTCC...TTGGATGGGGGTGGTTGCACAGTCCTGTGCGGTTCCCATGGCTTTCCAGCGTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR TCA 90 bp CACTGTACCCTGAGGCTGACCCTTTGGATCCCACAGCCTTCTCTGTGTCCTGTCCTTTGCAACGCTGGCTaGCTAGGTGTCTCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: HCTLRLTLWIPQPSLCPVLCNAG*LGVSLQ
Trigger: CTGCAGAGAGACACCTAGTCAGCCAGCGTTGCAAAG...GACAGGACACAGAGAAGGCTGTGGGATCCAAAGGGTCAGCCTCAGGGTACAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR TCA 90 bp ATCCCGAAGTTCCAAATCCAGCTCTACAAAGCTGCAGGAAGCAGTGCGGAGTGGGCCGCGGGTCATACTTaGGCAGGCGATAGAAGAGGG +
Preference number: 4 (lower is better)
Translates to: IPKFQIQLYKAAGSSAEWAAGHT*AGDRRG
Trigger: CCCTCTTCTATCGCCTGCTCAAGTATGACCCGCGGC...CCACTCCGCACTGCTTCCTGCAGCTTTGTAGAGCTGGATTTGGAACTTCGGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR GCA 90 bp TCTCAGCAATGCCTCTGCCCTCCCTGCAGCAGTCCCAAAATGAAAGCCACACCTGACTGCGGTTGTTTCTaGAGCCTGGGTGACCAGGTG +
Preference number: 4 (lower is better)
Translates to: SQQCLCPPCSSPKMKATPDCGCF*SLGDQV
Trigger: CACCTGGTCACCCAGGCTGCAGAAACAACCGCAGTC...AGGTGTGGCTTTCATTTTGGGACTGCTGCAGGGAGGGCAGAGGCATTGCTGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR GCA 90 bp CCGGATGTGGAAAACGTGGAAATGATGTGGCCACTGAAAGAAATTCAAGACAACGGGACGCGCCGAGACTaGAGGGTGTCTGCGCCGGGG +
Preference number: 4 (lower is better)
Translates to: PDVENVEMMWPLKEIQDNGTRRD*RVSAPG
Trigger: CCCCGGCGCAGACACCCTGCAGTCTCGGCGCGTCCC...GTTGTCTTGAATTTCTTTCAGTGGCCACATCATTTCCACGTTTTCCACATCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR GCA 90 bp AAACGCTGGAAAGCCATGGGAACCGCACAGGACTGTGCAACCACCCCCATCCAAAACCGCACAGGACTGTaGAACCACCCCCATCCAACA +
Preference number: 4 (lower is better)
Translates to: KRWKAMGTAQDCATTPIQNRTGL*NHPHPT
Trigger: TGTTGGATGGGGGTGGTTGCACAGTCCTGTGCGGTT...TTGGATGGGGGTGGTTGCACAGTCCTGTGCGGTTCCCATGGCTTTCCAGCGTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR GCA 90 bp TTGAGGGTCCCAGGCTCCTGCGCACAGCCTCGGTGCTCTGCGGGGTTCGGGACAAAGGTCAGGCTTCCATaGATAACATTTTCCCCAAAA +
Preference number: 4 (lower is better)
Translates to: LRVPGSCAQPRCSAGFGTKVRLP*ITFSPK
Trigger: TTTTGGGGAAAATGTTATGCATGGAAGCCTGACCTT...TGTCCCGAACCCCGCAGAGCACCGAGGCTGTGCGCAGGAGCCTGGGACCCTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR GCA 90 bp CACTGTACCCTGAGGCTGACCCTTTGGATCCCACAGCCTTCTCTGTGTCCTGTCCCAGCTCTACAAAGCTaGAGGAAGCAGTGCGGAGTG +
Preference number: 4 (lower is better)
Translates to: HCTLRLTLWIPQPSLCPVPALQS*RKQCGV
Trigger: CACTCCGCACTGCTTCCTGCAGCTTTGTAGAGCTGG...GACAGGACACAGAGAAGGCTGTGGGATCCAAAGGGTCAGCCTCAGGGTACAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR CCA 90 bp ATCCCGAAGTTCCAAATCCAGCTCTACAAAGCTGCAGGAAGCAGTGCGGAGTGGACTGGTCCTGTGTGCTaGTCTCAGGAGCTCTCCCCG +
Preference number: 4 (lower is better)
Translates to: IPKFQIQLYKAAGSSAEWTGPVC*SQELSP
Trigger: CGGGGAGAGCTCCTGAGACCAGCACACAGGACCAGT...CCACTCCGCACTGCTTCCTGCAGCTTTGTAGAGCTGGATTTGGAACTTCGGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR CCA 90 bp TCTCAGCAATGCCTCTGCCCTCCCTGCAGCAGTCCCAAAATGAAAGCCACACCTTCACGGGGAGGACACTaGTCCTGTGTGCTGGTCTCA +
Preference number: 4 (lower is better)
Translates to: SQQCLCPPCSSPKMKATPSRGGH*SCVLVS
Trigger: TGAGACCAGCACACAGGACCAGTGTCCTCCCCGTGA...AGGTGTGGCTTTCATTTTGGGACTGCTGCAGGGAGGGCAGAGGCATTGCTGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR CCA 90 bp CACTGTACCCTGAGGCTGACCCTTTGGATCCCACAGCCTTCTCTGTGTCCTGTCCAGATAACCAGGTATTaGGTGCGCCCTCGCTCTCAG +
Preference number: 4 (lower is better)
Translates to: HCTLRLTLWIPQPSLCPVQITRY*VRPRSQ
Trigger: CTGAGAGCGAGGGCGCACCCAATACCTGGTTATCTG...GACAGGACACAGAGAAGGCTGTGGGATCCAAAGGGTCAGCCTCAGGGTACAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR CCA 90 bp TCTGTCAAGGGACCCATCCGCACACCTCCTGGGTCTCAAGGCATCCACCCCCAGAAAGGCCCCTGCGTATaGGTTAATTTCACGAGTCAG +
Preference number: 4 (lower is better)
Translates to: SVKGPIRTPPGSQGIHPQKGPCV*VNFTSQ
Trigger: CTGACTCGTGAAATTAACCCATACGCAGGGGCCTTT...CTGGGGGTGGATGCCTTGAGACCCAGGAGGTGTGCGGATGGGTCCCTTGACAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR TCA 90 bp TCTCAGCAATGCCTCTGCCCTCCCTGCAGCAGTCCCAAAATGAAAGCCACACCTGACTGGAGCTGCAGTTaGCTGCGGTTGTTTCTGCAG +
Preference number: 4 (lower is better)
Translates to: SQQCLCPPCSSPKMKATPDWSCS*LRLFLQ
Trigger: CTGCAGAAACAACCGCAGTCAACTGCAGCTCCAGTC...AGGTGTGGCTTTCATTTTGGGACTGCTGCAGGGAGGGCAGAGGCATTGCTGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR TCA 90 bp TCTGTCAAGGGACCCATCCGCACACCTCCTGGGTCTCAAGGCATCCACCCCCAGGACTTGCTGAACTTCTaGACCCCAGCCACTTTAAAT +
Preference number: 4 (lower is better)
Translates to: SVKGPIRTPPGSQGIHPQDLLNF*TPATLN
Trigger: ATTTAAAGTGGCTGGGGTTCAGAAGTTCAGCAAGTC...CTGGGGGTGGATGCCTTGAGACCCAGGAGGTGTGCGGATGGGTCCCTTGACAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR TCA 90 bp TTGAGGGTCCCAGGCTCCTGCGCACAGCCTCGGTGCTCTGCGGGGTTCGGGACAAGTTTTTCCTACTTATaGTGTGCTGTTTGGTCACAT +
Preference number: 4 (lower is better)
Translates to: LRVPGSCAQPRCSAGFGTSFSYL*CAVWSH
Trigger: ATGTGACCAAACAGCACATCATAAGTAGGAAAAACT...TGTCCCGAACCCCGCAGAGCACCGAGGCTGTGCGCAGGAGCCTGGGACCCTCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR TCA 90 bp TCTGTCAAGGGACCCATCCGCACACCTCCTGGGTCTCAAGGCATCCACCCCCAGCTGGCACTTTCTGCGTaGTTTATTTCATCTCGGCAT +
Preference number: 4 (lower is better)
Translates to: SVKGPIRTPPGSQGIHPQLALSA*FISSRH
Trigger: ATGCCGAGATGAAATAAATCACGCAGAAAGTGCCAG...CTGGGGGTGGATGCCTTGAGACCCAGGAGGTGTGCGGATGGGTCCCTTGACAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR GCA 90 bp ATCCCGAAGTTCCAAATCCAGCTCTACAAAGCTGCAGGAAGCAGTGCGGAGTGGGACACTGGTCCTGTGTaGTGGTCTCAGGAGCTCTCC +
Preference number: 4 (lower is better)
Translates to: IPKFQIQLYKAAGSSAEWDTGPV*WSQELS
Trigger: GGAGAGCTCCTGAGACCAGCACACAGGACCAGTGTC...CCACTCCGCACTGCTTCCTGCAGCTTTGTAGAGCTGGATTTGGAACTTCGGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR GCA 90 bp TCTCAGCAATGCCTCTGCCCTCCCTGCAGCAGTCCCAAAATGAAAGCCACACCTGCTCTCAGGAGTCCGTaGTCACCCACTCACTTCACA +
Preference number: 4 (lower is better)
Translates to: SQQCLCPPCSSPKMKATPALRSP*SPTHFT
Trigger: TGTGAAGTGAGTGGGTGAGCACGGACTCCTGAGAGC...AGGTGTGGCTTTCATTTTGGGACTGCTGCAGGGAGGGCAGAGGCATTGCTGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR GCA 90 bp CCGGATGTGGAAAACGTGGAAATGATGTGGCCACTGAAAGAAATTCAAGACAACGCTGGAAGCGCCAGGTaGCCGCGCGGCTCACGCAGT +
Preference number: 4 (lower is better)
Translates to: PDVENVEMMWPLKEIQDNAGSAR*PRGSRS
Trigger: ACTGCGTGAGCCGCGCGGGCACCTGGCGCTTCCAGC...GTTGTCTTGAATTTCTTTCAGTGGCCACATCATTTCCACGTTTTCCACATCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR GCA 90 bp TCTCAGCAATGCCTCTGCCCTCCCTGCAGCAGTCCCAAAATGAAAGCCACACCTAACCGCACAGGACTGTaGAACCACCCCCATCCAACA +
Preference number: 4 (lower is better)
Translates to: SQQCLCPPCSSPKMKATPNRTGL*NHPHPT
Trigger: TGTTGGATGGGGGTGGTTGCACAGTCCTGTGCGGTT...AGGTGTGGCTTTCATTTTGGGACTGCTGCAGGGAGGGCAGAGGCATTGCTGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR GCA 90 bp CACTGTACCCTGAGGCTGACCCTTTGGATCCCACAGCCTTCTCTGTGTCCTGTCTGCCTCTGCCCTCCCTaGAGCAGTCCCAAAATGAAA +
Preference number: 4 (lower is better)
Translates to: HCTLRLTLWIPQPSLCPVCLCPP*SSPKMK
Trigger: TTTCATTTTGGGACTGCTGCAGGGAGGGCAGAGGCA...GACAGGACACAGAGAAGGCTGTGGGATCCAAAGGGTCAGCCTCAGGGTACAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR GCA 90 bp TCTCAGCAATGCCTCTGCCCTCCCTGCAGCAGTCCCAAAATGAAAGCCACACCTCCAGCTCTACAAAGCTaGAGGAAGCAGTGCGGAGTG +
Preference number: 4 (lower is better)
Translates to: SQQCLCPPCSSPKMKATPPALQS*RKQCGV
Trigger: CACTCCGCACTGCTTCCTGCAGCTTTGTAGAGCTGG...AGGTGTGGCTTTCATTTTGGGACTGCTGCAGGGAGGGCAGAGGCATTGCTGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR GCA 90 bp GCAGTGCGGAGTGGAGGGATGTTCCCAAGAGGAAGAATAAAACCGGAAGGAAAAAGTGTCTGTGCCGGGTaGCCGAAGGCTGCACAGTCC +
Preference number: 4 (lower is better)
Translates to: AVRSGGMFPRGRIKPEGKSVCAG*PKAAQS
Trigger: GGACTGTGCAGCCTTCGGGCACCCGGCACAGACACT...TTTTCCTTCCGGTTTTATTCTTCCTCTTGGGAACATCCCTCCACTCCGCACTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR CCA 90 bp GCAGTGCGGAGTGGAGGGATGTTCCCAAGAGGAAGAATAAAACCGGAAGGAAAAGAATGGATCTCCAGCTaGCGCCAGGACCGCGTCAGC +
Preference number: 4 (lower is better)
Translates to: AVRSGGMFPRGRIKPEGKEWISS*RQDRVS
Trigger: GCTGACGCGGTCCTGGCGCCAGCTGGAGATCCATTC...TTTTCCTTCCGGTTTTATTCTTCCTCTTGGGAACATCCCTCCACTCCGCACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR CCA 90 bp AAACGCTGGAAAGCCATGGGAACCGCACAGGACTGTGCAACCACCCCCATCCAAGAAAGTCTTGGTGAATaGATCTCCAGCTGGCGCCAG +
Preference number: 4 (lower is better)
Translates to: KRWKAMGTAQDCATTPIQESLGE*ISSWRQ
Trigger: CTGGCGCCAGCTGGAGATCCATTCACCAAGACTTTC...TTGGATGGGGGTGGTTGCACAGTCCTGTGCGGTTCCCATGGCTTTCCAGCGTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR CCA 90 bp CCGGATGTGGAAAACGTGGAAATGATGTGGCCACTGAAAGAAATTCAAGACAACCGCCGTGGCAGGTGGTaGCCTCATGCGCCACGGCGA +
Preference number: 4 (lower is better)
Translates to: PDVENVEMMWPLKEIQDNRRGRW*PHAPRR
Trigger: TCGCCGTGGCGCATGAGGCCACCACCTGCCACGGCG...GTTGTCTTGAATTTCTTTCAGTGGCCACATCATTTCCACGTTTTCCACATCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR CCA 90 bp CCGGATGTGGAAAACGTGGAAATGATGTGGCCACTGAAAGAAATTCAAGACAACGGCTCACGCAGTAGATaGCGCCGTCCAGGGCGGCGC +
Preference number: 4 (lower is better)
Translates to: PDVENVEMMWPLKEIQDNGSRSR*RRPGRR
Trigger: GCGCCGCCCTGGACGGCGCCATCTACTGCGTGAGCC...GTTGTCTTGAATTTCTTTCAGTGGCCACATCATTTCCACGTTTTCCACATCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR CCA 90 bp AGTCTGTTTTTCTTTCCCAAGATGATTAACCAAGTTGCCAAGCTATCCCCTCAGCCTTCCCGGGCAGGCTaGAAGCGCCAGGTGCCCGCG +
Preference number: 4 (lower is better)
Translates to: SLFFFPKMINQVAKLSPQPSRAG*KRQVPA
Trigger: CGCGGGCACCTGGCGCTTCCAGCCTGCCCGGGAAGG...CTGAGGGGATAGCTTGGCAACTTGGTTAATCATCTTGGGAAAGAAAAACAGACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR CCA 90 bp TCTGTCAAGGGACCCATCCGCACACCTCCTGGGTCTCAAGGCATCCACCCCCAGAACACCACTTTGAATTaGAAAAGGTCCTACCTGGGG +
Preference number: 4 (lower is better)
Translates to: SVKGPIRTPPGSQGIHPQNTTLN*KRSYLG
Trigger: CCCCAGGTAGGACCTTTTCCAATTCAAAGTGGTGTT...CTGGGGGTGGATGCCTTGAGACCCAGGAGGTGTGCGGATGGGTCCCTTGACAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR TCA 90 bp ATCCCGAAGTTCCAAATCCAGCTCTACAAAGCTGCAGGAAGCAGTGCGGAGTGGGACTGGAGCTGCAGTTaGCTGCGGTTGTTTCTGCAG +
Preference number: 4 (lower is better)
Translates to: IPKFQIQLYKAAGSSAEWDWSCS*LRLFLQ
Trigger: CTGCAGAAACAACCGCAGTCAACTGCAGCTCCAGTC...CCACTCCGCACTGCTTCCTGCAGCTTTGTAGAGCTGGATTTGGAACTTCGGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR TCA 90 bp GCAGTGCGGAGTGGAGGGATGTTCCCAAGAGGAAGAATAAAACCGGAAGGAAAAGATAGTGGTCGCTCATaGAGCAGTAGGCGGCGTCGC +
Preference number: 4 (lower is better)
Translates to: AVRSGGMFPRGRIKPEGKDSGRS*SSRRRR
Trigger: GCGACGCCGCCTACTGCTTCATGAGCGACCACTATC...TTTTCCTTCCGGTTTTATTCTTCCTCTTGGGAACATCCCTCCACTCCGCACTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR TCA 90 bp TCTGTCAAGGGACCCATCCGCACACCTCCTGGGTCTCAAGGCATCCACCCCCAGTCAAGTCAGGCGATATaGAGTCTGTTTTTCTTTCCC +
Preference number: 4 (lower is better)
Translates to: SVKGPIRTPPGSQGIHPQSSQAI*SLFFFP
Trigger: GGGAAAGAAAAACAGACTTCATATCGCCTGACTTGA...CTGGGGGTGGATGCCTTGAGACCCAGGAGGTGTGCGGATGGGTCCCTTGACAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR TCA 90 bp ATCCCGAAGTTCCAAATCCAGCTCTACAAAGCTGCAGGAAGCAGTGCGGAGTGGCATTTTGTTGTGAGGTaGCAGGGAGCACCTGGGGCT +
Preference number: 4 (lower is better)
Translates to: IPKFQIQLYKAAGSSAEWHFVVR*QGAPGA
Trigger: AGCCCCAGGTGCTCCCTGTCACCTCACAACAAAATG...CCACTCCGCACTGCTTCCTGCAGCTTTGTAGAGCTGGATTTGGAACTTCGGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR TCA 90 bp AAACGCTGGAAAGCCATGGGAACCGCACAGGACTGTGCAACCACCCCCATCCAAGAATCGCTTAGAGCTTaGACAGGCTTTGGAGGAGCT +
Preference number: 4 (lower is better)
Translates to: KRWKAMGTAQDCATTPIQESLRA*TGFGGA
Trigger: AGCTCCTCCAAAGCCTGTTCAAGCTCTAAGCGATTC...TTGGATGGGGGTGGTTGCACAGTCCTGTGCGGTTCCCATGGCTTTCCAGCGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR GCA 90 bp ATCCCGAAGTTCCAAATCCAGCTCTACAAAGCTGCAGGAAGCAGTGCGGAGTGGGGAGCTGCAGTTGACTaGGGTTGTTTCTGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: IPKFQIQLYKAAGSSAEWGAAVD*GCFCSL
Trigger: CAGGCTGCAGAAACAACCGCAGTCAACTGCAGCTCC...CCACTCCGCACTGCTTCCTGCAGCTTTGTAGAGCTGGATTTGGAACTTCGGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR GCA 90 bp CCGGATGTGGAAAACGTGGAAATGATGTGGCCACTGAAAGAAATTCAAGACAACGGGCCGGCTGCAGGCTaGCTCAGGAACCCCCACTGT +
Preference number: 4 (lower is better)
Translates to: PDVENVEMMWPLKEIQDNGPAAG*LRNPHC
Trigger: ACAGTGGGGGTTCCTGAGGCAGCCTGCAGCCGGCCC...GTTGTCTTGAATTTCTTTCAGTGGCCACATCATTTCCACGTTTTCCACATCCGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR GCA 90 bp TCGCCTCTATTTGTGAGCATGGATCTCATCCTCAAAGTCATAATAGTAAGTCCTCACCCCGGGGCCGGCTaGAGGCTGCCTCAGGAACCC +
Preference number: 4 (lower is better)
Translates to: SPLFVSMDLILKVIIVSPHPGAG*RLPQEP
Trigger: GGGTTCCTGAGGCAGCCTGCAGCCGGCCCCGGGGTG...AGGACTTACTATTATGACTTTGAGGATGAGATCCATGCTCACAAATAGAGGCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR GCA 90 bp TCTGTCAAGGGACCCATCCGCACACCTCCTGGGTCTCAAGGCATCCACCCCCAGCCCAAAAGACACCACTaGCTTTTCAGACATTTGGAA +
Preference number: 4 (lower is better)
Translates to: SVKGPIRTPPGSQGIHPQPKRHH*LFRHLE
Trigger: TTCCAAATGTCTGAAAAGGCAGTGGTGTCTTTTGGG...CTGGGGGTGGATGCCTTGAGACCCAGGAGGTGTGCGGATGGGTCCCTTGACAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR CCA 90 bp CACTGTACCCTGAGGCTGACCCTTTGGATCCCACAGCCTTCTCTGTGTCCTGTCAAAAGAGTCCCCTTATaGGCTCTCCTTCTCTGTGGC +
Preference number: 4 (lower is better)
Translates to: HCTLRLTLWIPQPSLCPVKRVPL*ALLLCG
Trigger: GCCACAGAGAAGGAGAGCCCATAAGGGGACTCTTTT...GACAGGACACAGAGAAGGCTGTGGGATCCAAAGGGTCAGCCTCAGGGTACAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR CCA 90 bp CCGGATGTGGAAAACGTGGAAATGATGTGGCCACTGAAAGAAATTCAAGACAACTCAGCCGCTGCCGCTTaGCCGCGCTCAGGACCTCGT +
Preference number: 4 (lower is better)
Translates to: PDVENVEMMWPLKEIQDNSAAAA*PRSGPR
Trigger: ACGAGGTCCTGAGCGCGGCCAAGCGGCAGCGGCTGA...GTTGTCTTGAATTTCTTTCAGTGGCCACATCATTTCCACGTTTTCCACATCCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR CCA 90 bp CCGGATGTGGAAAACGTGGAAATGATGTGGCCACTGAAAGAAATTCAAGACAACTCCAAACCACCAGCGTaGCCAGCGGCCCCGACTCCC +
Preference number: 4 (lower is better)
Translates to: PDVENVEMMWPLKEIQDNSKPPA*PAAPTP
Trigger: GGGAGTCGGGGCCGCTGGCCACGCTGGTGGTTTGGA...GTTGTCTTGAATTTCTTTCAGTGGCCACATCATTTCCACGTTTTCCACATCCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR CCA 90 bp ATCCCGAAGTTCCAAATCCAGCTCTACAAAGCTGCAGGAAGCAGTGCGGAGTGGAACGCTGGAAAGCCATaGGAACCGCACAGGACTGTG +
Preference number: 4 (lower is better)
Translates to: IPKFQIQLYKAAGSSAEWNAGKP*EPHRTV
Trigger: CACAGTCCTGTGCGGTTCCCATGGCTTTCCAGCGTT...CCACTCCGCACTGCTTCCTGCAGCTTTGTAGAGCTGGATTTGGAACTTCGGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR CCA 90 bp CCGGATGTGGAAAACGTGGAAATGATGTGGCCACTGAAAGAAATTCAAGACAACGTGACAGGGAGCACCTaGGGCTTTGCTGCCGGGCCC +
Preference number: 4 (lower is better)
Translates to: PDVENVEMMWPLKEIQDNVTGST*GFAAGP
Trigger: GGGCCCGGCAGCAAAGCCCCAGGTGCTCCCTGTCAC...GTTGTCTTGAATTTCTTTCAGTGGCCACATCATTTCCACGTTTTCCACATCCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR CCA 90 bp AAACGCTGGAAAGCCATGGGAACCGCACAGGACTGTGCAACCACCCCCATCCAAGCCTTTTCAGACATTTaGAAAGGCCCCTGCGTATGG +
Preference number: 4 (lower is better)
Translates to: KRWKAMGTAQDCATTPIQAFSDI*KGPCVW
Trigger: CCATACGCAGGGGCCTTTCCAAATGTCTGAAAAGGC...TTGGATGGGGGTGGTTGCACAGTCCTGTGCGGTTCCCATGGCTTTCCAGCGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
3UTR CAA 72 bp CCCTCCCTGCAGCAGTCCCAAAATGAAAGCCACACCTaGGAGGGTGTGGCTTTTCTCTGTTTCATGGGTGCA +
Preference number: 4 (lower is better)
Translates to: PSLQQSQNESHT*EGVAFLCFMGA
Trigger: TGCACCCATGAAACAGAGAAAAGCCACACCCTCCAAGGTGTGGCTTTCATTTTGGGACTGCTGCAGGGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR TCA 90 bp GCAGTGCGGAGTGGAGGGATGTTCCCAAGAGGAAGAATAAAACCGGAAGGAAAACAGAACACAGAAAGCTaGGACCGGCTGTGGCCCCAA +
Preference number: 4 (lower is better)
Translates to: AVRSGGMFPRGRIKPEGKQNTES*DRLWPQ
Trigger: TTGGGGCCACAGCCGGTCTCAGCTTTCTGTGTTCTG...TTTTCCTTCCGGTTTTATTCTTCCTCTTGGGAACATCCCTCCACTCCGCACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR TCA 90 bp CCGGATGTGGAAAACGTGGAAATGATGTGGCCACTGAAAGAAATTCAAGACAACACTCTTCCCCGGAGCTaGAGCACAGGGACGCGCCGA +
Preference number: 4 (lower is better)
Translates to: PDVENVEMMWPLKEIQDNTLPRS*STGTRR
Trigger: TCGGCGCGTCCCTGTGCTTCAGCTCCGGGGAAGAGT...GTTGTCTTGAATTTCTTTCAGTGGCCACATCATTTCCACGTTTTCCACATCCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR TCA 90 bp GCCAACCAAAGCGAGCACATGGTACGAAATTTTCAACTAAATCAGAAAGAGCTTCGTAGCGCTCCACGCTaGGCAGGCACTCGCCGCCCA +
Preference number: 4 (lower is better)
Translates to: ANQSEHMVRNFQLNQKELRSAPR*AGTRRP
Trigger: TGGGCGGCGAGTGCCTGCTCAGCGTGGAGCGCTACG...AAGCTCTTTCTGATTTAGTTGAAAATTTCGTACCATGTGCTCGCTTTGGTTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR TCA 90 bp CACTGTACCCTGAGGCTGACCCTTTGGATCCCACAGCCTTCTCTGTGTCCTGTCTACTCTTTTTGGAGTTaGGCCAACCAAAGCGAGCAC +
Preference number: 4 (lower is better)
Translates to: HCTLRLTLWIPQPSLCPVYSFWS*ANQSEH
Trigger: GTGCTCGCTTTGGTTGGCTCAACTCCAAAAAGAGTA...GACAGGACACAGAGAAGGCTGTGGGATCCAAAGGGTCAGCCTCAGGGTACAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR TCA 90 bp TCTGTCAAGGGACCCATCCGCACACCTCCTGGGTCTCAAGGCATCCACCCCCAGCTACACGATCCACATTaGAAACATCATATACAGTGG +
Preference number: 4 (lower is better)
Translates to: SVKGPIRTPPGSQGIHPQLHDPH*KHHIQW
Trigger: CCACTGTATATGATGTTTTCAATGTGGATCGTGTAG...CTGGGGGTGGATGCCTTGAGACCCAGGAGGTGTGCGGATGGGTCCCTTGACAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR TCA 90 bp AAACGCTGGAAAGCCATGGGAACCGCACAGGACTGTGCAACCACCCCCATCCAATACGGGTTAATTTCATaGGGAGTGTGGACAGCTGTC +
Preference number: 4 (lower is better)
Translates to: KRWKAMGTAQDCATTPIQYGLIS*GVWTAV
Trigger: GACAGCTGTCCACACTCCTCATGAAATTAACCCGTA...TTGGATGGGGGTGGTTGCACAGTCCTGTGCGGTTCCCATGGCTTTCCAGCGTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR TCA 90 bp AAACGCTGGAAAGCCATGGGAACCGCACAGGACTGTGCAACCACCCCCATCCAAAGCTTTGATCTCACATaGGAACCCGTCTCCTGTTTC +
Preference number: 4 (lower is better)
Translates to: KRWKAMGTAQDCATTPIQSFDLT*EPVSCF
Trigger: GAAACAGGAGACGGGTTCTCATGTGAGATCAAAGCT...TTGGATGGGGGTGGTTGCACAGTCCTGTGCGGTTCCCATGGCTTTCCAGCGTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR TCA 90 bp TCTCAGCAATGCCTCTGCCCTCCCTGCAGCAGTCCCAAAATGAAAGCCACACCTGCTTTGGAGGAGCTTTaGTCTCACATGAGAACCCGT +
Preference number: 4 (lower is better)
Translates to: SQQCLCPPCSSPKMKATPALEEL*SHMRTR
Trigger: ACGGGTTCTCATGTGAGATCAAAGCTCCTCCAAAGC...AGGTGTGGCTTTCATTTTGGGACTGCTGCAGGGAGGGCAGAGGCATTGCTGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR TCA 90 bp TCTCAGCAATGCCTCTGCCCTCCCTGCAGCAGTCCCAAAATGAAAGCCACACCTCATCTCGGCATGAACTaGCAAACATACGAGGCTCTG +
Preference number: 4 (lower is better)
Translates to: SQQCLCPPCSSPKMKATPHLGMN*QTYEAL
Trigger: CAGAGCCTCGTATGTTTGTCAGTTCATGCCGAGATG...AGGTGTGGCTTTCATTTTGGGACTGCTGCAGGGAGGGCAGAGGCATTGCTGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR GCA 90 bp AGTCTGTTTTTCTTTCCCAAGATGATTAACCAAGTTGCCAAGCTATCCCCTCAGGCCTCTCCGAGCACCTaGGAGCGGGAGCTGCTCCTC +
Preference number: 4 (lower is better)
Translates to: SLFFFPKMINQVAKLSPQASPST*ERELLL
Trigger: GAGGAGCAGCTCCCGCTCGCAGGTGCTCGGAGAGGC...CTGAGGGGATAGCTTGGCAACTTGGTTAATCATCTTGGGAAAGAAAAACAGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320248.4
CDS-3UTR GCA 90 bp AAACGCTGGAAAGCCATGGGAACCGCACAGGACTGTGCAACCACCCCCATCCAATCATCCGTAATTCACTaGCAGGGGGATGTTAGGAGA +
Preference number: 4 (lower is better)
Translates to: KRWKAMGTAQDCATTPIQSSVIH*QGDVRR
Trigger: TCTCCTAACATCCCCCTGGCAGTGAATTACGGATGA...TTGGATGGGGGTGGTTGCACAGTCCTGTGCGGTTCCCATGGCTTTCCAGCGTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR GCA 90 bp TCGCCTCTATTTGTGAGCATGGATCTCATCCTCAAAGTCATAATAGTAAGTCCTGCTGAGGCGAGGGACTaGGGCGGGGACTCTTCCCCG +
Preference number: 4 (lower is better)
Translates to: SPLFVSMDLILKVIIVSPAEARD*GGDSSP
Trigger: CGGGGAAGAGTCCCCGCCGCAGTCCCTCGCCTCAGC...AGGACTTACTATTATGACTTTGAGGATGAGATCCATGCTCACAAATAGAGGCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR GCA 90 bp AGTCTGTTTTTCTTTCCCAAGATGATTAACCAAGTTGCCAAGCTATCCCCTCAGGTCAGGCTCACTCCCTaGACCCGCAGCACGTCCCGC +
Preference number: 4 (lower is better)
Translates to: SLFFFPKMINQVAKLSPQVRLTP*TRSTSR
Trigger: GCGGGACGTGCTGCGGGTGCAGGGAGTGAGCCTGAC...CTGAGGGGATAGCTTGGCAACTTGGTTAATCATCTTGGGAAAGAAAAACAGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR GCA 90 bp TCGCCTCTATTTGTGAGCATGGATCTCATCCTCAAAGTCATAATAGTAAGTCCTCAGGTGGTGGCCTCATaGGCCACGGCGAAGGCGCCC +
Preference number: 4 (lower is better)
Translates to: SPLFVSMDLILKVIIVSPQVVAS*ATAKAP
Trigger: GGGCGCCTTCGCCGTGGCGCATGAGGCCACCACCTG...AGGACTTACTATTATGACTTTGAGGATGAGATCCATGCTCACAAATAGAGGCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR GCA 90 bp GCCAACCAAAGCGAGCACATGGTACGAAATTTTCAACTAAATCAGAAAGAGCTTCAGGTGGTGGCCTCATaGGCCACGGCGAAGGCGCCC +
Preference number: 4 (lower is better)
Translates to: ANQSEHMVRNFQLNQKELQVVAS*ATAKAP
Trigger: GGGCGCCTTCGCCGTGGCGCATGAGGCCACCACCTG...AAGCTCTTTCTGATTTAGTTGAAAATTTCGTACCATGTGCTCGCTTTGGTTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR GCA 90 bp TCGCCTCTATTTGTGAGCATGGATCTCATCCTCAAAGTCATAATAGTAAGTCCTAGCGCTCGCGGCTGCTaGTGCACGGGCACTCCTGCC +
Preference number: 4 (lower is better)
Translates to: SPLFVSMDLILKVIIVSPSARGC*CTGTPA
Trigger: GGCAGGAGTGCCCGTGCAGCAGCAGCCGCGAGCGCT...AGGACTTACTATTATGACTTTGAGGATGAGATCCATGCTCACAAATAGAGGCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR GCA 90 bp GCCAACCAAAGCGAGCACATGGTACGAAATTTTCAACTAAATCAGAAAGAGCTTGCTGGAAGCGCCAGGTaGCCGCGCGGCTCACGCAGT +
Preference number: 4 (lower is better)
Translates to: ANQSEHMVRNFQLNQKELAGSAR*PRGSRS
Trigger: ACTGCGTGAGCCGCGCGGGCACCTGGCGCTTCCAGC...AAGCTCTTTCTGATTTAGTTGAAAATTTCGTACCATGTGCTCGCTTTGGTTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR GCA 90 bp AGTCTGTTTTTCTTTCCCAAGATGATTAACCAAGTTGCCAAGCTATCCCCTCAGACAGCCTCGGTGCTCTaGGGGGTTCGGGACACCCCG +
Preference number: 4 (lower is better)
Translates to: SLFFFPKMINQVAKLSPQTASVL*GVRDTP
Trigger: CGGGGTGTCCCGAACCCCGCAGAGCACCGAGGCTGT...CTGAGGGGATAGCTTGGCAACTTGGTTAATCATCTTGGGAAAGAAAAACAGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR GCA 90 bp ATCCCGAAGTTCCAAATCCAGCTCTACAAAGCTGCAGGAAGCAGTGCGGAGTGGCCAGCCCCCGAGTCATaGATAAGGTTCAAGCTGATC +
Preference number: 4 (lower is better)
Translates to: IPKFQIQLYKAAGSSAEWPAPES*IRFKLI
Trigger: GATCAGCTTGAACCTTATGCATGACTCGGGGGCTGG...CCACTCCGCACTGCTTCCTGCAGCTTTGTAGAGCTGGATTTGGAACTTCGGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR CCA 90 bp TCGCCTCTATTTGTGAGCATGGATCTCATCCTCAAAGTCATAATAGTAAGTCCTCCCGGGCTCAGTCCCTaGGTAGAGGACGCAGGGGGC +
Preference number: 4 (lower is better)
Translates to: SPLFVSMDLILKVIIVSPPGLSP*VEDAGG
Trigger: GCCCCCTGCGTCCTCTACCCAGGGACTGAGCCCGGG...AGGACTTACTATTATGACTTTGAGGATGAGATCCATGCTCACAAATAGAGGCGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR CCA 90 bp AGTCTGTTTTTCTTTCCCAAGATGATTAACCAAGTTGCCAAGCTATCCCCTCAGTCTCGCCGTGGCAGGTaGTGGCCTCATGCGCCACGG +
Preference number: 4 (lower is better)
Translates to: SLFFFPKMINQVAKLSPQSRRGR*WPHAPR
Trigger: CCGTGGCGCATGAGGCCACCACCTGCCACGGCGAGA...CTGAGGGGATAGCTTGGCAACTTGGTTAATCATCTTGGGAAAGAAAAACAGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR CCA 90 bp TCTGTCAAGGGACCCATCCGCACACCTCCTGGGTCTCAAGGCATCCACCCCCAGCTGAAAATATTAGCCTaGTCCTGGTCCCATTTCATA +
Preference number: 4 (lower is better)
Translates to: SVKGPIRTPPGSQGIHPQLKILA*SWSHFI
Trigger: TATGAAATGGGACCAGGACCAGGCTAATATTTTCAG...CTGGGGGTGGATGCCTTGAGACCCAGGAGGTGTGCGGATGGGTCCCTTGACAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR CCA 90 bp CACTGTACCCTGAGGCTGACCCTTTGGATCCCACAGCCTTCTCTGTGTCCTGTCATGAAAGCCACACCTTaGAGGGTGTGGCTTTTCTCT +
Preference number: 4 (lower is better)
Translates to: HCTLRLTLWIPQPSLCPVMKATP*RVWLFS
Trigger: AGAGAAAAGCCACACCCTCCAAGGTGTGGCTTTCAT...GACAGGACACAGAGAAGGCTGTGGGATCCAAAGGGTCAGCCTCAGGGTACAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR TCA 90 bp AGTCTGTTTTTCTTTCCCAAGATGATTAACCAAGTTGCCAAGCTATCCCCTCAGACTCTTCCCCGGAGCTaGAGCACAGGGACGCGCCGA +
Preference number: 4 (lower is better)
Translates to: SLFFFPKMINQVAKLSPQTLPRS*STGTRR
Trigger: TCGGCGCGTCCCTGTGCTTCAGCTCCGGGGAAGAGT...CTGAGGGGATAGCTTGGCAACTTGGTTAATCATCTTGGGAAAGAAAAACAGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR TCA 90 bp GCCAACCAAAGCGAGCACATGGTACGAAATTTTCAACTAAATCAGAAAGAGCTTTCGCGGCGACCTACTTaGGGGTCCCAGGCTCCTGCG +
Preference number: 4 (lower is better)
Translates to: ANQSEHMVRNFQLNQKELSRRPT*GSQAPA
Trigger: CGCAGGAGCCTGGGACCCTCAAGTAGGTCGCCGCGA...AAGCTCTTTCTGATTTAGTTGAAAATTTCGTACCATGTGCTCGCTTTGGTTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR TCA 90 bp CACTGTACCCTGAGGCTGACCCTTTGGATCCCACAGCCTTCTCTGTGTCCTGTCTTTCAACTGAAAATATaGAAGCCCCCTCGGTCCAAC +
Preference number: 4 (lower is better)
Translates to: HCTLRLTLWIPQPSLCPVFQLKI*KPPRSN
Trigger: GTTGGACCGAGGGGGCTTTCATATTTTCAGTTGAAA...GACAGGACACAGAGAAGGCTGTGGGATCCAAAGGGTCAGCCTCAGGGTACAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR TCA 90 bp ATCCCGAAGTTCCAAATCCAGCTCTACAAAGCTGCAGGAAGCAGTGCGGAGTGGTCTCGTTCCAGATTATaGAAGCGGCTGGGCATACAG +
Preference number: 4 (lower is better)
Translates to: IPKFQIQLYKAAGSSAEWSRSRL*KRLGIQ
Trigger: CTGTATGCCCAGCCGCTTTCATAATCTGGAACGAGA...CCACTCCGCACTGCTTCCTGCAGCTTTGTAGAGCTGGATTTGGAACTTCGGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR TCA 90 bp TCTGTCAAGGGACCCATCCGCACACCTCCTGGGTCTCAAGGCATCCACCCCCAGATTTTAATGGGTGGATaGCCAGGAATATTTTTGCAC +
Preference number: 4 (lower is better)
Translates to: SVKGPIRTPPGSQGIHPQILMGG*PGIFLH
Trigger: GTGCAAAAATATTCCTGGTCATCCACCCATTAAAAT...CTGGGGGTGGATGCCTTGAGACCCAGGAGGTGTGCGGATGGGTCCCTTGACAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR TCA 90 bp ATCCCGAAGTTCCAAATCCAGCTCTACAAAGCTGCAGGAAGCAGTGCGGAGTGGCATCTCGGCATGAACTaGCAAACATACGAGGCTCTG +
Preference number: 4 (lower is better)
Translates to: IPKFQIQLYKAAGSSAEWHLGMN*QTYEAL
Trigger: CAGAGCCTCGTATGTTTGTCAGTTCATGCCGAGATG...CCACTCCGCACTGCTTCCTGCAGCTTTGTAGAGCTGGATTTGGAACTTCGGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR GCA 90 bp TCTCAGCAATGCCTCTGCCCTCCCTGCAGCAGTCCCAAAATGAAAGCCACACCTCTCTGCAGCTTCCTTTaGTGGGATATCAGGTGTTTC +
Preference number: 4 (lower is better)
Translates to: SQQCLCPPCSSPKMKATPLCSFL*WDIRCF
Trigger: GAAACACCTGATATCCCAGCAAAGGAAGCTGCAGAG...AGGTGTGGCTTTCATTTTGGGACTGCTGCAGGGAGGGCAGAGGCATTGCTGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR GCA 90 bp CCGGATGTGGAAAACGTGGAAATGATGTGGCCACTGAAAGAAATTCAAGACAACAGTGTCTGTGCCGGGTaGCCGAAGGCTGCACAGTCC +
Preference number: 4 (lower is better)
Translates to: PDVENVEMMWPLKEIQDNSVCAG*PKAAQS
Trigger: GGACTGTGCAGCCTTCGGGCACCCGGCACAGACACT...GTTGTCTTGAATTTCTTTCAGTGGCCACATCATTTCCACGTTTTCCACATCCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR GCA 90 bp AGTCTGTTTTTCTTTCCCAAGATGATTAACCAAGTTGCCAAGCTATCCCCTCAGCCAGCACAGTGTCTGTaGCGGGTGCCCGAAGGCTGC +
Preference number: 4 (lower is better)
Translates to: SLFFFPKMINQVAKLSPQPAQCL*RVPEGC
Trigger: GCAGCCTTCGGGCACCCGGCACAGACACTGTGCTGG...CTGAGGGGATAGCTTGGCAACTTGGTTAATCATCTTGGGAAAGAAAAACAGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR CCA 90 bp GCAGTGCGGAGTGGAGGGATGTTCCCAAGAGGAAGAATAAAACCGGAAGGAAAAGGCTCTCCTTCTCTGTaGCTCCCACTTGTGGCTACA +
Preference number: 4 (lower is better)
Translates to: AVRSGGMFPRGRIKPEGKGSPSL*LPLVAT
Trigger: TGTAGCCACAAGTGGGAGCCACAGAGAAGGAGAGCC...TTTTCCTTCCGGTTTTATTCTTCCTCTTGGGAACATCCCTCCACTCCGCACTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR CCA 90 bp TCGCCTCTATTTGTGAGCATGGATCTCATCCTCAAAGTCATAATAGTAAGTCCTTCTCGCCGTGGCAGGTaGTGGCCTCATGCGCCACGG +
Preference number: 4 (lower is better)
Translates to: SPLFVSMDLILKVIIVSPSRRGR*WPHAPR
Trigger: CCGTGGCGCATGAGGCCACCACCTGCCACGGCGAGA...AGGACTTACTATTATGACTTTGAGGATGAGATCCATGCTCACAAATAGAGGCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR CCA 90 bp TCTGTCAAGGGACCCATCCGCACACCTCCTGGGTCTCAAGGCATCCACCCCCAGCTTACAGTAAGAAAATaGGTTGGATTCGGAGTTCAA +
Preference number: 4 (lower is better)
Translates to: SVKGPIRTPPGSQGIHPQLTVRK*VGFGVQ
Trigger: TTGAACTCCGAATCCAACCCATTTTCTTACTGTAAG...CTGGGGGTGGATGCCTTGAGACCCAGGAGGTGTGCGGATGGGTCCCTTGACAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR CCA 90 bp CACTGTACCCTGAGGCTGACCCTTTGGATCCCACAGCCTTCTCTGTGTCCTGTCAGCTTGAACAGGCTTTaGAGGAGCTTTGATCTCACA +
Preference number: 4 (lower is better)
Translates to: HCTLRLTLWIPQPSLCPVSLNRL*RSFDLT
Trigger: TGTGAGATCAAAGCTCCTCCAAAGCCTGTTCAAGCT...GACAGGACACAGAGAAGGCTGTGGGATCCAAAGGGTCAGCCTCAGGGTACAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR TCA 90 bp ATCCCGAAGTTCCAAATCCAGCTCTACAAAGCTGCAGGAAGCAGTGCGGAGTGGTACGGGTTAATTTCATaGGGAGTGTGGACAGCTGTC +
Preference number: 4 (lower is better)
Translates to: IPKFQIQLYKAAGSSAEWYGLIS*GVWTAV
Trigger: GACAGCTGTCCACACTCCTCATGAAATTAACCCGTA...CCACTCCGCACTGCTTCCTGCAGCTTTGTAGAGCTGGATTTGGAACTTCGGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR GCA 90 bp GCCAACCAAAGCGAGCACATGGTACGAAATTTTCAACTAAATCAGAAAGAGCTTCACCTGGGGCTTTGCTaGCGGGCCCCACAGGAAGCT +
Preference number: 4 (lower is better)
Translates to: ANQSEHMVRNFQLNQKELHLGLC*RAPQEA
Trigger: AGCTTCCTGTGGGGCCCGGCAGCAAAGCCCCAGGTG...AAGCTCTTTCTGATTTAGTTGAAAATTTCGTACCATGTGCTCGCTTTGGTTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR GCA 90 bp CACTGTACCCTGAGGCTGACCCTTTGGATCCCACAGCCTTCTCTGTGTCCTGTCAAACATACGAGGCTCTaGACTATTTATGCCCAGGAT +
Preference number: 4 (lower is better)
Translates to: HCTLRLTLWIPQPSLCPVKHTRL*TIYAQD
Trigger: ATCCTGGGCATAAATAGTGCAGAGCCTCGTATGTTT...GACAGGACACAGAGAAGGCTGTGGGATCCAAAGGGTCAGCCTCAGGGTACAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR CCA 90 bp GCCAACCAAAGCGAGCACATGGTACGAAATTTTCAACTAAATCAGAAAGAGCTTGGACCTCGTAGCAGTTaGCCAGGCTCAGCTGCGGCC +
Preference number: 4 (lower is better)
Translates to: ANQSEHMVRNFQLNQKELGPRSS*PGSAAA
Trigger: GGCCGCAGCTGAGCCTGGCCAACTGCTACGAGGTCC...AAGCTCTTTCTGATTTAGTTGAAAATTTCGTACCATGTGCTCGCTTTGGTTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR CCA 90 bp CACTGTACCCTGAGGCTGACCCTTTGGATCCCACAGCCTTCTCTGTGTCCTGTCGCTGGGCATACAGAGTaGACTATCAAAGATTGCTTT +
Preference number: 4 (lower is better)
Translates to: HCTLRLTLWIPQPSLCPVAGHTE*TIKDCF
Trigger: AAAGCAATCTTTGATAGTCCACTCTGTATGCCCAGC...GACAGGACACAGAGAAGGCTGTGGGATCCAAAGGGTCAGCCTCAGGGTACAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR TCA 90 bp AAACGCTGGAAAGCCATGGGAACCGCACAGGACTGTGCAACCACCCCCATCCAACTACACGATCCACATTaGAAACATCATATACAGTGG +
Preference number: 4 (lower is better)
Translates to: KRWKAMGTAQDCATTPIQLHDPH*KHHIQW
Trigger: CCACTGTATATGATGTTTTCAATGTGGATCGTGTAG...TTGGATGGGGGTGGTTGCACAGTCCTGTGCGGTTCCCATGGCTTTCCAGCGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR TCA 90 bp AAACGCTGGAAAGCCATGGGAACCGCACAGGACTGTGCAACCACCCCCATCCAACAAGAGATTATGTCTTaGATCTATCCTGACTTCAGC +
Preference number: 4 (lower is better)
Translates to: KRWKAMGTAQDCATTPIQQEIMS*IYPDFS
Trigger: GCTGAAGTCAGGATAGATTCAAGACATAATCTCTTG...TTGGATGGGGGTGGTTGCACAGTCCTGTGCGGTTCCCATGGCTTTCCAGCGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR TCA 90 bp ATCCCGAAGTTCCAAATCCAGCTCTACAAAGCTGCAGGAAGCAGTGCGGAGTGGCTGGCACTTTCTGCGTaGTTTATTTCATCTCGGCAT +
Preference number: 4 (lower is better)
Translates to: IPKFQIQLYKAAGSSAEWLALSA*FISSRH
Trigger: ATGCCGAGATGAAATAAATCACGCAGAAAGTGCCAG...CCACTCCGCACTGCTTCCTGCAGCTTTGTAGAGCTGGATTTGGAACTTCGGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR GCA 90 bp GCCAACCAAAGCGAGCACATGGTACGAAATTTTCAACTAAATCAGAAAGAGCTTGGGAATCTCACACGCTaGTCCCCCGCCTCGCCTTTG +
Preference number: 4 (lower is better)
Translates to: ANQSEHMVRNFQLNQKELGNLTR*SPASPL
Trigger: CAAAGGCGAGGCGGGGGAGCAGCGTGTGAGATTCCC...AAGCTCTTTCTGATTTAGTTGAAAATTTCGTACCATGTGCTCGCTTTGGTTGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR GCA 90 bp TCGCCTCTATTTGTGAGCATGGATCTCATCCTCAAAGTCATAATAGTAAGTCCTGGGAATCTCACACGCTaGTCCCCCGCCTCGCCTTTG +
Preference number: 4 (lower is better)
Translates to: SPLFVSMDLILKVIIVSPGNLTR*SPASPL
Trigger: CAAAGGCGAGGCGGGGGAGCAGCGTGTGAGATTCCC...AGGACTTACTATTATGACTTTGAGGATGAGATCCATGCTCACAAATAGAGGCGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR GCA 90 bp AAGCGAGCACATGGTACGAAATTTTCAACTAAATCAGAAAGAGCTTTACTTATCCCGAGCGCTCGCGGCTaGTGCTGCACGGGCACTCCT +
Preference number: 4 (lower is better)
Translates to: KRAHGTKFSTKSERALLIPSARG*CCTGTP
Trigger: AGGAGTGCCCGTGCAGCAGCAGCCGCGAGCGCTCGG...GATAAGTAAAGCTCTTTCTGATTTAGTTGAAAATTTCGTACCATGTGCTCGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR GCA 90 bp AAGCGAGCACATGGTACGAAATTTTCAACTAAATCAGAAAGAGCTTTACTTATCGCGCCTCGCCGCGGCTaGCGCTCAGATCGAAGCGGT +
Preference number: 4 (lower is better)
Translates to: KRAHGTKFSTKSERALLIAPRRG*RSDRSG
Trigger: ACCGCTTCGATCTGAGCGGCAGCCGCGGCGAGGCGC...GATAAGTAAAGCTCTTTCTGATTTAGTTGAAAATTTCGTACCATGTGCTCGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR GCA 90 bp GCAGTGCGGAGTGGAGGGATGTTCCCAAGAGGAAGAATAAAACCGGAAGGAAAAACAGTGAGACGGAGCTaGTCTAGGCATGTGAGTTTG +
Preference number: 4 (lower is better)
Translates to: AVRSGGMFPRGRIKPEGKTVRRS*SRHVSL
Trigger: CAAACTCACATGCCTAGAGCAGCTCCGTCTCACTGT...TTTTCCTTCCGGTTTTATTCTTCCTCTTGGGAACATCCCTCCACTCCGCACTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR GCA 90 bp GCAGTGCGGAGTGGAGGGATGTTCCCAAGAGGAAGAATAAAACCGGAAGGAAAATACAGCAGAAGTCGGTaGCTCCACAGACTCAGAAAC +
Preference number: 4 (lower is better)
Translates to: AVRSGGMFPRGRIKPEGKYSRSR*LHRLRN
Trigger: GTTTCTGAGTCTGTGGAGGCACCGACTTCTGCTGTA...TTTTCCTTCCGGTTTTATTCTTCCTCTTGGGAACATCCCTCCACTCCGCACTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR CCA 90 bp GCCAACCAAAGCGAGCACATGGTACGAAATTTTCAACTAAATCAGAAAGAGCTTGAATGGATCTCCAGCTaGCGCCAGGACCGCGTCAGC +
Preference number: 4 (lower is better)
Translates to: ANQSEHMVRNFQLNQKELEWISS*RQDRVS
Trigger: GCTGACGCGGTCCTGGCGCCAGCTGGAGATCCATTC...AAGCTCTTTCTGATTTAGTTGAAAATTTCGTACCATGTGCTCGCTTTGGTTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR CCA 90 bp AAGCGAGCACATGGTACGAAATTTTCAACTAAATCAGAAAGAGCTTTACTTATCCCCGGGCTCAGTCCCTaGGTAGAGGACGCAGGGGGC +
Preference number: 4 (lower is better)
Translates to: KRAHGTKFSTKSERALLIPGLSP*VEDAGG
Trigger: GCCCCCTGCGTCCTCTACCCAGGGACTGAGCCCGGG...GATAAGTAAAGCTCTTTCTGATTTAGTTGAAAATTTCGTACCATGTGCTCGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR CCA 90 bp AAGCGAGCACATGGTACGAAATTTTCAACTAAATCAGAAAGAGCTTTACTTATCCGCCGTGGCAGGTGGTaGCCTCATGCGCCACGGCGA +
Preference number: 4 (lower is better)
Translates to: KRAHGTKFSTKSERALLIRRGRW*PHAPRR
Trigger: TCGCCGTGGCGCATGAGGCCACCACCTGCCACGGCG...GATAAGTAAAGCTCTTTCTGATTTAGTTGAAAATTTCGTACCATGTGCTCGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR CCA 90 bp CCGGATGTGGAAAACGTGGAAATGATGTGGCCACTGAAAGAAATTCAAGACAACGGAAAAGGTCCTACCTaGGGCATCAGCCGTTGCCAG +
Preference number: 4 (lower is better)
Translates to: PDVENVEMMWPLKEIQDNGKGPT*GISRCQ
Trigger: CTGGCAACGGCTGATGCCCCAGGTAGGACCTTTTCC...GTTGTCTTGAATTTCTTTCAGTGGCCACATCATTTCCACGTTTTCCACATCCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
3UTR CAA 72 bp CCAACAGTGAGACGGAGCTGCTCTAGGCATGTGAGTTaGAGTAGCAATGGTGTGGGGAAGGAAATACTTCCA +
Preference number: 4 (lower is better)
Translates to: PTVRRSCSRHVS*SSNGVGKEILP
Trigger: TGGAAGTATTTCCTTCCCCACACCATTGCTACTCAAACTCACATGCCTAGAGCAGCTCCGTCTCACTGTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR TCA 90 bp GCAGTGCGGAGTGGAGGGATGTTCCCAAGAGGAAGAATAAAACCGGAAGGAAAAGTTCGCCTCTATTTGTaGGCATGGATCTCATCCTCA +
Preference number: 4 (lower is better)
Translates to: AVRSGGMFPRGRIKPEGKVRLYL*AWISSS
Trigger: TGAGGATGAGATCCATGCTCACAAATAGAGGCGAAC...TTTTCCTTCCGGTTTTATTCTTCCTCTTGGGAACATCCCTCCACTCCGCACTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR GCA 90 bp CCGGATGTGGAAAACGTGGAAATGATGTGGCCACTGAAAGAAATTCAAGACAACGCAGGACCCTTCCTCTaGAGCTTCCTTTGCTGGGAT +
Preference number: 4 (lower is better)
Translates to: PDVENVEMMWPLKEIQDNAGPFL*SFLCWD
Trigger: ATCCCAGCAAAGGAAGCTGCAGAGGAAGGGTCCTGC...GTTGTCTTGAATTTCTTTCAGTGGCCACATCATTTCCACGTTTTCCACATCCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR GCA 90 bp CCGGATGTGGAAAACGTGGAAATGATGTGGCCACTGAAAGAAATTCAAGACAACGCTCTCAGGAGTCCGTaGTCACCCACTCACTTCACA +
Preference number: 4 (lower is better)
Translates to: PDVENVEMMWPLKEIQDNALRSP*SPTHFT
Trigger: TGTGAAGTGAGTGGGTGAGCACGGACTCCTGAGAGC...GTTGTCTTGAATTTCTTTCAGTGGCCACATCATTTCCACGTTTTCCACATCCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR GCA 90 bp TCGCCTCTATTTGTGAGCATGGATCTCATCCTCAAAGTCATAATAGTAAGTCCTACGCACGGGCTCCACTaGTTGGCCAGGCAGTGGTAT +
Preference number: 4 (lower is better)
Translates to: SPLFVSMDLILKVIIVSPTHGLH*LARQWY
Trigger: ATACCACTGCCTGGCCAAGCAGTGGAGCCCGTGCGT...AGGACTTACTATTATGACTTTGAGGATGAGATCCATGCTCACAAATAGAGGCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR GCA 90 bp AGTCTGTTTTTCTTTCCCAAGATGATTAACCAAGTTGCCAAGCTATCCCCTCAGTGGGGCATCAGCCGTTaGCAGGCAGTCTCAGCAATG +
Preference number: 4 (lower is better)
Translates to: SLFFFPKMINQVAKLSPQWGISR*QAVSAM
Trigger: CATTGCTGAGACTGCCTGGCAACGGCTGATGCCCCA...CTGAGGGGATAGCTTGGCAACTTGGTTAATCATCTTGGGAAAGAAAAACAGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR CCA 90 bp AAGCGAGCACATGGTACGAAATTTTCAACTAAATCAGAAAGAGCTTTACTTATCTCAGCCGCTGCCGCTTaGCCGCGCTCAGGACCTCGT +
Preference number: 4 (lower is better)
Translates to: KRAHGTKFSTKSERALLISAAAA*PRSGPR
Trigger: ACGAGGTCCTGAGCGCGGCCAAGCGGCAGCGGCTGA...GATAAGTAAAGCTCTTTCTGATTTAGTTGAAAATTTCGTACCATGTGCTCGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR CCA 90 bp GCCAACCAAAGCGAGCACATGGTACGAAATTTTCAACTAAATCAGAAAGAGCTTTGCTTGGCCAGGCAGTaGTATCGGGACACGCTGACC +
Preference number: 4 (lower is better)
Translates to: ANQSEHMVRNFQLNQKELCLARQ*YRDTLT
Trigger: GGTCAGCGTGTCCCGATACCACTGCCTGGCCAAGCA...AAGCTCTTTCTGATTTAGTTGAAAATTTCGTACCATGTGCTCGCTTTGGTTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR CCA 90 bp AAACGCTGGAAAGCCATGGGAACCGCACAGGACTGTGCAACCACCCCCATCCAAGGGACAGTGTTACTCTaGAAGCCTAATTTCAATATT +
Preference number: 4 (lower is better)
Translates to: KRWKAMGTAQDCATTPIQGTVLL*KPNFNI
Trigger: AATATTGAAATTAGGCTTCCAGAGTAACACTGTCCC...TTGGATGGGGGTGGTTGCACAGTCCTGTGCGGTTCCCATGGCTTTCCAGCGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR CCA 90 bp GCAGTGCGGAGTGGAGGGATGTTCCCAAGAGGAAGAATAAAACCGGAAGGAAAAATGAAAGCCACACCTTaGAGGGTGTGGCTTTTCTCT +
Preference number: 4 (lower is better)
Translates to: AVRSGGMFPRGRIKPEGKMKATP*RVWLFS
Trigger: AGAGAAAAGCCACACCCTCCAAGGTGTGGCTTTCAT...TTTTCCTTCCGGTTTTATTCTTCCTCTTGGGAACATCCCTCCACTCCGCACTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR TCA 90 bp GCCAACCAAAGCGAGCACATGGTACGAAATTTTCAACTAAATCAGAAAGAGCTTCAGAACACAGAAAGCTaGGACCGGCTGTGGCCCCAA +
Preference number: 4 (lower is better)
Translates to: ANQSEHMVRNFQLNQKELQNTES*DRLWPQ
Trigger: TTGGGGCCACAGCCGGTCTCAGCTTTCTGTGTTCTG...AAGCTCTTTCTGATTTAGTTGAAAATTTCGTACCATGTGCTCGCTTTGGTTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR TCA 90 bp TCGCCTCTATTTGTGAGCATGGATCTCATCCTCAAAGTCATAATAGTAAGTCCTTCCACTTGGCGTGTCTaGAGCTCCTGCCAGCACAGT +
Preference number: 4 (lower is better)
Translates to: SPLFVSMDLILKVIIVSPSTWRV*SSCQHS
Trigger: ACTGTGCTGGCAGGAGCTTCAGACACGCCAAGTGGA...AGGACTTACTATTATGACTTTGAGGATGAGATCCATGCTCACAAATAGAGGCGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR GCA 90 bp AGTCTGTTTTTCTTTCCCAAGATGATTAACCAAGTTGCCAAGCTATCCCCTCAGCCCACTCACTTCACATaGTGTCATATCACCGCGCCC +
Preference number: 4 (lower is better)
Translates to: SLFFFPKMINQVAKLSPQPTHFT*CHITAP
Trigger: GGGCGCGGTGATATGACAGCATGTGAAGTGAGTGGG...CTGAGGGGATAGCTTGGCAACTTGGTTAATCATCTTGGGAAAGAAAAACAGACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR GCA 90 bp AGTCTGTTTTTCTTTCCCAAGATGATTAACCAAGTTGCCAAGCTATCCCCTCAGGGAGCTGCAGTTGACTaGGGTTGTTTCTGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: SLFFFPKMINQVAKLSPQGAAVD*GCFCSL
Trigger: CAGGCTGCAGAAACAACCGCAGTCAACTGCAGCTCC...CTGAGGGGATAGCTTGGCAACTTGGTTAATCATCTTGGGAAAGAAAAACAGACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR GCA 90 bp ATCCCGAAGTTCCAAATCCAGCTCTACAAAGCTGCAGGAAGCAGTGCGGAGTGGAAGGTCAGGCTTCCATaGATAACATTTTCCCCAAAA +
Preference number: 4 (lower is better)
Translates to: IPKFQIQLYKAAGSSAEWKVRLP*ITFSPK
Trigger: TTTTGGGGAAAATGTTATGCATGGAAGCCTGACCTT...CCACTCCGCACTGCTTCCTGCAGCTTTGTAGAGCTGGATTTGGAACTTCGGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR CCA 90 bp AGTCTGTTTTTCTTTCCCAAGATGATTAACCAAGTTGCCAAGCTATCCCCTCAGCAGATAACCAGGTATTaGGTGCGCCCTCGCTCTCAG +
Preference number: 4 (lower is better)
Translates to: SLFFFPKMINQVAKLSPQQITRY*VRPRSQ
Trigger: CTGAGAGCGAGGGCGCACCCAATACCTGGTTATCTG...CTGAGGGGATAGCTTGGCAACTTGGTTAATCATCTTGGGAAAGAAAAACAGACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR CCA 90 bp CCGGATGTGGAAAACGTGGAAATGATGTGGCCACTGAAAGAAATTCAAGACAACGTTGTTTCTGCAGCCTaGGTGACCAGGTGTCTCTCT +
Preference number: 4 (lower is better)
Translates to: PDVENVEMMWPLKEIQDNVVSAA*VTRCLS
Trigger: AGAGAGACACCTGGTCACCCAGGCTGCAGAAACAAC...GTTGTCTTGAATTTCTTTCAGTGGCCACATCATTTCCACGTTTTCCACATCCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR CCA 90 bp GCAGTGCGGAGTGGAGGGATGTTCCCAAGAGGAAGAATAAAACCGGAAGGAAAAGATTATGAAAGCGGCTaGGCATACAGAGTGGACTAT +
Preference number: 4 (lower is better)
Translates to: AVRSGGMFPRGRIKPEGKDYESG*AYRVDY
Trigger: ATAGTCCACTCTGTATGCCCAGCCGCTTTCATAATC...TTTTCCTTCCGGTTTTATTCTTCCTCTTGGGAACATCCCTCCACTCCGCACTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR CCA 90 bp CCGGATGTGGAAAACGTGGAAATGATGTGGCCACTGAAAGAAATTCAAGACAACCACGAGTCAGACATTTaGAAATGCCCCGGCATACGG +
Preference number: 4 (lower is better)
Translates to: PDVENVEMMWPLKEIQDNHESDI*KCPGIR
Trigger: CCGTATGCCGGGGCATTTCCAAATGTCTGACTCGTG...GTTGTCTTGAATTTCTTTCAGTGGCCACATCATTTCCACGTTTTCCACATCCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR CCA 90 bp ATCCCGAAGTTCCAAATCCAGCTCTACAAAGCTGCAGGAAGCAGTGCGGAGTGGCAAATGAACCTTGATTaGCAATACAGAAGGGATTGC +
Preference number: 4 (lower is better)
Translates to: IPKFQIQLYKAAGSSAEWQMNLD*QYRRDC
Trigger: GCAATCCCTTCTGTATTGCCAATCAAGGTTCATTTG...CCACTCCGCACTGCTTCCTGCAGCTTTGTAGAGCTGGATTTGGAACTTCGGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR CCA 90 bp GCCAACCAAAGCGAGCACATGGTACGAAATTTTCAACTAAATCAGAAAGAGCTTGGAAGCAGTGCGGAGTaGAGGGATGTTCCCAAGAGG +
Preference number: 4 (lower is better)
Translates to: ANQSEHMVRNFQLNQKELGSSAE*RDVPKR
Trigger: CCTCTTGGGAACATCCCTCCACTCCGCACTGCTTCC...AAGCTCTTTCTGATTTAGTTGAAAATTTCGTACCATGTGCTCGCTTTGGTTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR TCA 90 bp AGTCTGTTTTTCTTTCCCAAGATGATTAACCAAGTTGCCAAGCTATCCCCTCAGTCTCTCTCTGCAGCCTaGGTGACTAGCTATCCCTCT +
Preference number: 4 (lower is better)
Translates to: SLFFFPKMINQVAKLSPQSLSAA*VTSYPS
Trigger: AGAGGGATAGCTAGTCACTCAGGCTGCAGAGAGAGA...CTGAGGGGATAGCTTGGCAACTTGGTTAATCATCTTGGGAAAGAAAAACAGACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR TCA 90 bp CCGGATGTGGAAAACGTGGAAATGATGTGGCCACTGAAAGAAATTCAAGACAACGAATCGCTTAGAGCTTaGACAGGCTTTGGAGGAGCT +
Preference number: 4 (lower is better)
Translates to: PDVENVEMMWPLKEIQDNESLRA*TGFGGA
Trigger: AGCTCCTCCAAAGCCTGTTCAAGCTCTAAGCGATTC...GTTGTCTTGAATTTCTTTCAGTGGCCACATCATTTCCACGTTTTCCACATCCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR GCA 90 bp TCGCCTCTATTTGTGAGCATGGATCTCATCCTCAAAGTCATAATAGTAAGTCCTGCAGGACCCTTCCTCTaGAGCTTCCTTTGCTGGGAT +
Preference number: 4 (lower is better)
Translates to: SPLFVSMDLILKVIIVSPAGPFL*SFLCWD
Trigger: ATCCCAGCAAAGGAAGCTGCAGAGGAAGGGTCCTGC...AGGACTTACTATTATGACTTTGAGGATGAGATCCATGCTCACAAATAGAGGCGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR GCA 90 bp ATCCCGAAGTTCCAAATCCAGCTCTACAAAGCTGCAGGAAGCAGTGCGGAGTGGTTCCTACTTATGATGTaGTGTTTGGTCACATTTAGC +
Preference number: 4 (lower is better)
Translates to: IPKFQIQLYKAAGSSAEWFLLMM*CLVTFS
Trigger: GCTAAATGTGACCAAACAGCACATCATAAGTAGGAA...CCACTCCGCACTGCTTCCTGCAGCTTTGTAGAGCTGGATTTGGAACTTCGGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR GCA 90 bp AGTCTGTTTTTCTTTCCCAAGATGATTAACCAAGTTGCCAAGCTATCCCCTCAGTGCCTCTGCCCTCCCTaGAGCAGTCCCAAAATGAAA +
Preference number: 4 (lower is better)
Translates to: SLFFFPKMINQVAKLSPQCLCPP*SSPKMK
Trigger: TTTCATTTTGGGACTGCTGCAGGGAGGGCAGAGGCA...CTGAGGGGATAGCTTGGCAACTTGGTTAATCATCTTGGGAAAGAAAAACAGACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR CCA 90 bp TCGCCTCTATTTGTGAGCATGGATCTCATCCTCAAAGTCATAATAGTAAGTCCTGGCTCTCCTTCTCTGTaGCTCCCACTTGTGGCTACA +
Preference number: 4 (lower is better)
Translates to: SPLFVSMDLILKVIIVSPGSPSL*LPLVAT
Trigger: TGTAGCCACAAGTGGGAGCCACAGAGAAGGAGAGCC...AGGACTTACTATTATGACTTTGAGGATGAGATCCATGCTCACAAATAGAGGCGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR CCA 90 bp GCCAACCAAAGCGAGCACATGGTACGAAATTTTCAACTAAATCAGAAAGAGCTTAACGCTGGAAAGCCATaGGAACCGCACAGGACTGTG +
Preference number: 4 (lower is better)
Translates to: ANQSEHMVRNFQLNQKELNAGKP*EPHRTV
Trigger: CACAGTCCTGTGCGGTTCCCATGGCTTTCCAGCGTT...AAGCTCTTTCTGATTTAGTTGAAAATTTCGTACCATGTGCTCGCTTTGGTTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR TCA 90 bp AGTCTGTTTTTCTTTCCCAAGATGATTAACCAAGTTGCCAAGCTATCCCCTCAGTCTCGTTCCAGATTATaGAAGCGGCTGGGCATACAG +
Preference number: 4 (lower is better)
Translates to: SLFFFPKMINQVAKLSPQSRSRL*KRLGIQ
Trigger: CTGTATGCCCAGCCGCTTTCATAATCTGGAACGAGA...CTGAGGGGATAGCTTGGCAACTTGGTTAATCATCTTGGGAAAGAAAAACAGACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR TCA 90 bp AGTCTGTTTTTCTTTCCCAAGATGATTAACCAAGTTGCCAAGCTATCCCCTCAGTATCCCCTCAGTTCATaGGTAACCATGGGCAAGCAG +
Preference number: 4 (lower is better)
Translates to: SLFFFPKMINQVAKLSPQYPLSS*VTMGKQ
Trigger: CTGCTTGCCCATGGTTACTCATGAACTGAGGGGATA...CTGAGGGGATAGCTTGGCAACTTGGTTAATCATCTTGGGAAAGAAAAACAGACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR TCA 90 bp CCGGATGTGGAAAACGTGGAAATGATGTGGCCACTGAAAGAAATTCAAGACAACAGCTTTGATCTCACATaGGAACCCGTCTCCTGTTTC +
Preference number: 4 (lower is better)
Translates to: PDVENVEMMWPLKEIQDNSFDLT*EPVSCF
Trigger: GAAACAGGAGACGGGTTCTCATGTGAGATCAAAGCT...GTTGTCTTGAATTTCTTTCAGTGGCCACATCATTTCCACGTTTTCCACATCCGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR GCA 90 bp TCGCCTCTATTTGTGAGCATGGATCTCATCCTCAAAGTCATAATAGTAAGTCCTTTGTGGCTACACAACTaGAAGGTCACGGGGAGGACA +
Preference number: 4 (lower is better)
Translates to: SPLFVSMDLILKVIIVSPLWLHN*KVTGRT
Trigger: TGTCCTCCCCGTGACCTTGCAGTTGTGTAGCCACAA...AGGACTTACTATTATGACTTTGAGGATGAGATCCATGCTCACAAATAGAGGCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR GCA 90 bp AGTCTGTTTTTCTTTCCCAAGATGATTAACCAAGTTGCCAAGCTATCCCCTCAGACAGTGAGACGGAGCTaGTCTAGGCATGTGAGTTTG +
Preference number: 4 (lower is better)
Translates to: SLFFFPKMINQVAKLSPQTVRRS*SRHVSL
Trigger: CAAACTCACATGCCTAGAGCAGCTCCGTCTCACTGT...CTGAGGGGATAGCTTGGCAACTTGGTTAATCATCTTGGGAAAGAAAAACAGACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR GCA 90 bp GCCAACCAAAGCGAGCACATGGTACGAAATTTTCAACTAAATCAGAAAGAGCTTCCAGCCCCCGAGTCATaGATAAGGTTCAAGCTGATC +
Preference number: 4 (lower is better)
Translates to: ANQSEHMVRNFQLNQKELPAPES*IRFKLI
Trigger: GATCAGCTTGAACCTTATGCATGACTCGGGGGCTGG...AAGCTCTTTCTGATTTAGTTGAAAATTTCGTACCATGTGCTCGCTTTGGTTGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR GCA 90 bp CCGGATGTGGAAAACGTGGAAATGATGTGGCCACTGAAAGAAATTCAAGACAACACAGATCACAACAGCTaGCCTGAACTTGGCCTTCAA +
Preference number: 4 (lower is better)
Translates to: PDVENVEMMWPLKEIQDNTDHNS*PELGLQ
Trigger: TTGAAGGCCAAGTTCAGGGCAGCTGTTGTGATCTGT...GTTGTCTTGAATTTCTTTCAGTGGCCACATCATTTCCACGTTTTCCACATCCGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR CCA 90 bp GCAGTGCGGAGTGGAGGGATGTTCCCAAGAGGAAGAATAAAACCGGAAGGAAAACTGAAAATATTAGCCTaGTCCTGGTCCCATTTCATA +
Preference number: 4 (lower is better)
Translates to: AVRSGGMFPRGRIKPEGKLKILA*SWSHFI
Trigger: TATGAAATGGGACCAGGACCAGGCTAATATTTTCAG...TTTTCCTTCCGGTTTTATTCTTCCTCTTGGGAACATCCCTCCACTCCGCACTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR CCA 90 bp AGTCTGTTTTTCTTTCCCAAGATGATTAACCAAGTTGCCAAGCTATCCCCTCAGCAAAAACACTGCTCATaGCGTGGCAGGTCCTCTAGT +
Preference number: 4 (lower is better)
Translates to: SLFFFPKMINQVAKLSPQQKHCS*RGRSSS
Trigger: ACTAGAGGACCTGCCACGCCATGAGCAGTGTTTTTG...CTGAGGGGATAGCTTGGCAACTTGGTTAATCATCTTGGGAAAGAAAAACAGACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR TCA 90 bp AAGCGAGCACATGGTACGAAATTTTCAACTAAATCAGAAAGAGCTTTACTTATCGATCGAAGCGGTAGATaGAGCCGTCGAGAGCCACCA +
Preference number: 4 (lower is better)
Translates to: KRAHGTKFSTKSERALLIDRSGR*SRREPP
Trigger: TGGTGGCTCTCGACGGCTTCATCTACCGCTTCGATC...GATAAGTAAAGCTCTTTCTGATTTAGTTGAAAATTTCGTACCATGTGCTCGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR TCA 90 bp GCAGTGCGGAGTGGAGGGATGTTCCCAAGAGGAAGAATAAAACCGGAAGGAAAAAGTTTTTCCTACTTATaGTGTGCTGTTTGGTCACAT +
Preference number: 4 (lower is better)
Translates to: AVRSGGMFPRGRIKPEGKSFSYL*CAVWSH
Trigger: ATGTGACCAAACAGCACATCATAAGTAGGAAAAACT...TTTTCCTTCCGGTTTTATTCTTCCTCTTGGGAACATCCCTCCACTCCGCACTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR TCA 90 bp GCAGTGCGGAGTGGAGGGATGTTCCCAAGAGGAAGAATAAAACCGGAAGGAAAAGAGAAACGACCCAACTaGTTTGTTTTTAATCCTCAT +
Preference number: 4 (lower is better)
Translates to: AVRSGGMFPRGRIKPEGKEKRPN*FVFNPH
Trigger: ATGAGGATTAAAAACAAATCAGTTGGGTCGTTTCTC...TTTTCCTTCCGGTTTTATTCTTCCTCTTGGGAACATCCCTCCACTCCGCACTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR TCA 90 bp GCAGTGCGGAGTGGAGGGATGTTCCCAAGAGGAAGAATAAAACCGGAAGGAAAAGCTCGTGTTTTCTTATaGACAATAACATTGCAGAAG +
Preference number: 4 (lower is better)
Translates to: AVRSGGMFPRGRIKPEGKARVFL*TITLQK
Trigger: CTTCTGCAATGTTATTGTTCATAAGAAAACACGAGC...TTTTCCTTCCGGTTTTATTCTTCCTCTTGGGAACATCCCTCCACTCCGCACTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR CCA 90 bp GCCAACCAAAGCGAGCACATGGTACGAAATTTTCAACTAAATCAGAAAGAGCTTTGCAGCTTCCTTTGCTaGGATATCAGGTGTTTCCGC +
Preference number: 4 (lower is better)
Translates to: ANQSEHMVRNFQLNQKELCSFLC*DIRCFR
Trigger: GCGGAAACACCTGATATCCCAGCAAAGGAAGCTGCA...AAGCTCTTTCTGATTTAGTTGAAAATTTCGTACCATGTGCTCGCTTTGGTTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR CCA 90 bp AGTCTGTTTTTCTTTCCCAAGATGATTAACCAAGTTGCCAAGCTATCCCCTCAGACACCTTGGAGGGTGTaGCTTTTCTCTGTTTCATGG +
Preference number: 4 (lower is better)
Translates to: SLFFFPKMINQVAKLSPQTPWRV*LFSVSW
Trigger: CCATGAAACAGAGAAAAGCCACACCCTCCAAGGTGT...CTGAGGGGATAGCTTGGCAACTTGGTTAATCATCTTGGGAAAGAAAAACAGACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR CCA 90 bp AAGCGAGCACATGGTACGAAATTTTCAACTAAATCAGAAAGAGCTTTACTTATCGGAAAAGGTCCTACCTaGGGCATCAGCCGTTGCCAG +
Preference number: 4 (lower is better)
Translates to: KRAHGTKFSTKSERALLIGKGPT*GISRCQ
Trigger: CTGGCAACGGCTGATGCCCCAGGTAGGACCTTTTCC...GATAAGTAAAGCTCTTTCTGATTTAGTTGAAAATTTCGTACCATGTGCTCGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR TCA 90 bp AAGCGAGCACATGGTACGAAATTTTCAACTAAATCAGAAAGAGCTTTACTTATCCCCAGAAAGTCTTGGTaGATGGATCTCCAGCTGGCG +
Preference number: 4 (lower is better)
Translates to: KRAHGTKFSTKSERALLIPRKSW*MDLQLA
Trigger: CGCCAGCTGGAGATCCATTCACCAAGACTTTCTGGG...GATAAGTAAAGCTCTTTCTGATTTAGTTGAAAATTTCGTACCATGTGCTCGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR TCA 90 bp AAGCGAGCACATGGTACGAAATTTTCAACTAAATCAGAAAGAGCTTTACTTATCGTGTGTCCGACTTGCTaGACTTCTGAACCCCAGCCA +
Preference number: 4 (lower is better)
Translates to: KRAHGTKFSTKSERALLIVCPTC*TSEPQP
Trigger: TGGCTGGGGTTCAGAAGTTCAGCAAGTCGGACACAC...GATAAGTAAAGCTCTTTCTGATTTAGTTGAAAATTTCGTACCATGTGCTCGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR TCA 90 bp AAGCGAGCACATGGTACGAAATTTTCAACTAAATCAGAAAGAGCTTTACTTATCCATTTTGTTGTGAGGTaGCAGGGAGCACCTGGGGCT +
Preference number: 4 (lower is better)
Translates to: KRAHGTKFSTKSERALLIHFVVR*QGAPGA
Trigger: AGCCCCAGGTGCTCCCTGTCACCTCACAACAAAATG...GATAAGTAAAGCTCTTTCTGATTTAGTTGAAAATTTCGTACCATGTGCTCGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR TCA 90 bp AGTCTGTTTTTCTTTCCCAAGATGATTAACCAAGTTGCCAAGCTATCCCCTCAGAGTTACCTAAGAGACTaGCAGATTCAACGGCTGCTA +
Preference number: 4 (lower is better)
Translates to: SLFFFPKMINQVAKLSPQSYLRD*QIQRLL
Trigger: TAGCAGCCGTTGAATCTGTCAGTCTCTTAGGTAACT...CTGAGGGGATAGCTTGGCAACTTGGTTAATCATCTTGGGAAAGAAAAACAGACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR GCA 90 bp AAGCGAGCACATGGTACGAAATTTTCAACTAAATCAGAAAGAGCTTTACTTATCCCCACTCACTTCACATaGTGTCATATCACCGCGCCC +
Preference number: 4 (lower is better)
Translates to: KRAHGTKFSTKSERALLIPTHFT*CHITAP
Trigger: GGGCGCGGTGATATGACAGCATGTGAAGTGAGTGGG...GATAAGTAAAGCTCTTTCTGATTTAGTTGAAAATTTCGTACCATGTGCTCGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR GCA 90 bp AGTCTGTTTTTCTTTCCCAAGATGATTAACCAAGTTGCCAAGCTATCCCCTCAGCTTGTTATAAATCTATaGCCACTGTCACTCGGCCAC +
Preference number: 4 (lower is better)
Translates to: SLFFFPKMINQVAKLSPQLVINL*PLSLGH
Trigger: GTGGCCGAGTGACAGTGGGCATAGATTTATAACAAG...CTGAGGGGATAGCTTGGCAACTTGGTTAATCATCTTGGGAAAGAAAAACAGACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR CCA 90 bp GCCAACCAAAGCGAGCACATGGTACGAAATTTTCAACTAAATCAGAAAGAGCTTAAAGGCCCCTGCGTATaGGTTAATTTCACGAGTCAG +
Preference number: 4 (lower is better)
Translates to: ANQSEHMVRNFQLNQKELKGPCV*VNFTSQ
Trigger: CTGACTCGTGAAATTAACCCATACGCAGGGGCCTTT...AAGCTCTTTCTGATTTAGTTGAAAATTTCGTACCATGTGCTCGCTTTGGTTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR CCA 90 bp AGTCTGTTTTTCTTTCCCAAGATGATTAACCAAGTTGCCAAGCTATCCCCTCAGAGCTTGAACAGGCTTTaGAGGAGCTTTGATCTCACA +
Preference number: 4 (lower is better)
Translates to: SLFFFPKMINQVAKLSPQSLNRL*RSFDLT
Trigger: TGTGAGATCAAAGCTCCTCCAAAGCCTGTTCAAGCT...CTGAGGGGATAGCTTGGCAACTTGGTTAATCATCTTGGGAAAGAAAAACAGACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR TCA 90 bp TCGCCTCTATTTGTGAGCATGGATCTCATCCTCAAAGTCATAATAGTAAGTCCTTTTCAACTGAAAATATaGAAGCCCCCTCGGTCCAAC +
Preference number: 4 (lower is better)
Translates to: SPLFVSMDLILKVIIVSPFQLKI*KPPRSN
Trigger: GTTGGACCGAGGGGGCTTTCATATTTTCAGTTGAAA...AGGACTTACTATTATGACTTTGAGGATGAGATCCATGCTCACAAATAGAGGCGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR TCA 90 bp CCGGATGTGGAAAACGTGGAAATGATGTGGCCACTGAAAGAAATTCAAGACAACAAAGGCAGGACAGTGTaGATGGTACATTGCTTAAAA +
Preference number: 4 (lower is better)
Translates to: PDVENVEMMWPLKEIQDNKGRTV*MVHCLK
Trigger: TTTTAAGCAATGTACCATTCACACTGTCCTGCCTTT...GTTGTCTTGAATTTCTTTCAGTGGCCACATCATTTCCACGTTTTCCACATCCGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR TCA 90 bp CCGGATGTGGAAAACGTGGAAATGATGTGGCCACTGAAAGAAATTCAAGACAACCCAGAATTACTGAAGTaGCACCAGAAATTAGCAGAA +
Preference number: 4 (lower is better)
Translates to: PDVENVEMMWPLKEIQDNPELLK*HQKLAE
Trigger: TTCTGCTAATTTCTGGTGTCACTTCAGTAATTCTGG...GTTGTCTTGAATTTCTTTCAGTGGCCACATCATTTCCACGTTTTCCACATCCGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR TCA 90 bp AGTCTGTTTTTCTTTCCCAAGATGATTAACCAAGTTGCCAAGCTATCCCCTCAGTATTTCATCTCGGCATaGACTGACAAACATACGAGG +
Preference number: 4 (lower is better)
Translates to: SLFFFPKMINQVAKLSPQYFISA*TDKHTR
Trigger: CCTCGTATGTTTGTCAGTTCATGCCGAGATGAAATA...CTGAGGGGATAGCTTGGCAACTTGGTTAATCATCTTGGGAAAGAAAAACAGACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR GCA 90 bp AGTCTGTTTTTCTTTCCCAAGATGATTAACCAAGTTGCCAAGCTATCCCCTCAGCCCAAAAGACACCACTaGCTTTTCAGACATTTGGAA +
Preference number: 4 (lower is better)
Translates to: SLFFFPKMINQVAKLSPQPKRHH*LFRHLE
Trigger: TTCCAAATGTCTGAAAAGGCAGTGGTGTCTTTTGGG...CTGAGGGGATAGCTTGGCAACTTGGTTAATCATCTTGGGAAAGAAAAACAGACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR CCA 90 bp AAGCGAGCACATGGTACGAAATTTTCAACTAAATCAGAAAGAGCTTTACTTATCGTTGTTTCTGCAGCCTaGGTGACCAGGTGTCTCTCT +
Preference number: 4 (lower is better)
Translates to: KRAHGTKFSTKSERALLIVVSAA*VTRCLS
Trigger: AGAGAGACACCTGGTCACCCAGGCTGCAGAAACAAC...GATAAGTAAAGCTCTTTCTGATTTAGTTGAAAATTTCGTACCATGTGCTCGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR CCA 90 bp AAGCGAGCACATGGTACGAAATTTTCAACTAAATCAGAAAGAGCTTTACTTATCGAAAGTCTTGGTGAATaGATCTCCAGCTGGCGCCAG +
Preference number: 4 (lower is better)
Translates to: KRAHGTKFSTKSERALLIESLGE*ISSWRQ
Trigger: CTGGCGCCAGCTGGAGATCCATTCACCAAGACTTTC...GATAAGTAAAGCTCTTTCTGATTTAGTTGAAAATTTCGTACCATGTGCTCGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR TCA 90 bp AGTCTGTTTTTCTTTCCCAAGATGATTAACCAAGTTGCCAAGCTATCCCCTCAGTTTTCTTTCCCAAGATaGTTAACCAAGTTGCCAAGC +
Preference number: 4 (lower is better)
Translates to: SLFFFPKMINQVAKLSPQFSFPR*LTKLPS
Trigger: GCTTGGCAACTTGGTTAATCATCTTGGGAAAGAAAA...CTGAGGGGATAGCTTGGCAACTTGGTTAATCATCTTGGGAAAGAAAAACAGACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR TCA 90 bp CCGGATGTGGAAAACGTGGAAATGATGTGGCCACTGAAAGAAATTCAAGACAACGAAATTCAAGACAACTaGAACAACTGCAGATTTCCA +
Preference number: 4 (lower is better)
Translates to: PDVENVEMMWPLKEIQDNEIQDN*NNCRFP
Trigger: TGGAAATCTGCAGTTGTTTCAGTTGTCTTGAATTTC...GTTGTCTTGAATTTCTTTCAGTGGCCACATCATTTCCACGTTTTCCACATCCGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR GCA 90 bp TCGCCTCTATTTGTGAGCATGGATCTCATCCTCAAAGTCATAATAGTAAGTCCTAAACATACGAGGCTCTaGACTATTTATGCCCAGGAT +
Preference number: 4 (lower is better)
Translates to: SPLFVSMDLILKVIIVSPKHTRL*TIYAQD
Trigger: ATCCTGGGCATAAATAGTGCAGAGCCTCGTATGTTT...AGGACTTACTATTATGACTTTGAGGATGAGATCCATGCTCACAAATAGAGGCGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR CCA 90 bp AAGCGAGCACATGGTACGAAATTTTCAACTAAATCAGAAAGAGCTTTACTTATCAAAAGAGTCCCCTTATaGGCTCTCCTTCTCTGTGGC +
Preference number: 4 (lower is better)
Translates to: KRAHGTKFSTKSERALLIKRVPL*ALLLCG
Trigger: GCCACAGAGAAGGAGAGCCCATAAGGGGACTCTTTT...GATAAGTAAAGCTCTTTCTGATTTAGTTGAAAATTTCGTACCATGTGCTCGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR CCA 90 bp AAGCGAGCACATGGTACGAAATTTTCAACTAAATCAGAAAGAGCTTTACTTATCCAAAAACACTGCTCATaGCGTGGCAGGTCCTCTAGT +
Preference number: 4 (lower is better)
Translates to: KRAHGTKFSTKSERALLIQKHCS*RGRSSS
Trigger: ACTAGAGGACCTGCCACGCCATGAGCAGTGTTTTTG...GATAAGTAAAGCTCTTTCTGATTTAGTTGAAAATTTCGTACCATGTGCTCGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR TCA 90 bp AAGCGAGCACATGGTACGAAATTTTCAACTAAATCAGAAAGAGCTTTACTTATCGTTCGCCTCTATTTGTaGGCATGGATCTCATCCTCA +
Preference number: 4 (lower is better)
Translates to: KRAHGTKFSTKSERALLIVRLYL*AWISSS
Trigger: TGAGGATGAGATCCATGCTCACAAATAGAGGCGAAC...GATAAGTAAAGCTCTTTCTGATTTAGTTGAAAATTTCGTACCATGTGCTCGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR TCA 90 bp TCGCCTCTATTTGTGAGCATGGATCTCATCCTCAAAGTCATAATAGTAAGTCCTTTTTCTTTCCCAAGATaGTTAACCAAGTTGCCAAGC +
Preference number: 4 (lower is better)
Translates to: SPLFVSMDLILKVIIVSPFSFPR*LTKLPS
Trigger: GCTTGGCAACTTGGTTAATCATCTTGGGAAAGAAAA...AGGACTTACTATTATGACTTTGAGGATGAGATCCATGCTCACAAATAGAGGCGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR TCA 90 bp TCGCCTCTATTTGTGAGCATGGATCTCATCCTCAAAGTCATAATAGTAAGTCCTAAAGGCAGGACAGTGTaGATGGTACATTGCTTAAAA +
Preference number: 4 (lower is better)
Translates to: SPLFVSMDLILKVIIVSPKGRTV*MVHCLK
Trigger: TTTTAAGCAATGTACCATTCACACTGTCCTGCCTTT...AGGACTTACTATTATGACTTTGAGGATGAGATCCATGCTCACAAATAGAGGCGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR TCA 90 bp AGTCTGTTTTTCTTTCCCAAGATGATTAACCAAGTTGCCAAGCTATCCCCTCAGATTTTAATGGGTGGATaGCCAGGAATATTTTTGCAC +
Preference number: 4 (lower is better)
Translates to: SLFFFPKMINQVAKLSPQILMGG*PGIFLH
Trigger: GTGCAAAAATATTCCTGGTCATCCACCCATTAAAAT...CTGAGGGGATAGCTTGGCAACTTGGTTAATCATCTTGGGAAAGAAAAACAGACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR TCA 90 bp GCCAACCAAAGCGAGCACATGGTACGAAATTTTCAACTAAATCAGAAAGAGCTTCCAGAATTACTGAAGTaGCACCAGAAATTAGCAGAA +
Preference number: 4 (lower is better)
Translates to: ANQSEHMVRNFQLNQKELPELLK*HQKLAE
Trigger: TTCTGCTAATTTCTGGTGTCACTTCAGTAATTCTGG...AAGCTCTTTCTGATTTAGTTGAAAATTTCGTACCATGTGCTCGCTTTGGTTGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR GCA 90 bp AAGCGAGCACATGGTACGAAATTTTCAACTAAATCAGAAAGAGCTTTACTTATCTCATCCGTAATTCACTaGCAGGGGGATGTTAGGAGA +
Preference number: 4 (lower is better)
Translates to: KRAHGTKFSTKSERALLISSVIH*QGDVRR
Trigger: TCTCCTAACATCCCCCTGGCAGTGAATTACGGATGA...GATAAGTAAAGCTCTTTCTGATTTAGTTGAAAATTTCGTACCATGTGCTCGCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR GCA 90 bp CCGGATGTGGAAAACGTGGAAATGATGTGGCCACTGAAAGAAATTCAAGACAACTACATGCAGTTTACTTaGAAATCTATGGTGATAAGC +
Preference number: 4 (lower is better)
Translates to: PDVENVEMMWPLKEIQDNYMQFT*KSMVIS
Trigger: GCTTATCACCATAGATTTGCAAGTAAACTGCATGTA...GTTGTCTTGAATTTCTTTCAGTGGCCACATCATTTCCACGTTTTCCACATCCGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR GCA 90 bp AAGCGAGCACATGGTACGAAATTTTCAACTAAATCAGAAAGAGCTTTACTTATCAAAAAGCAAAAACACTaGTCATGGCGTGGCAGGTCC +
Preference number: 4 (lower is better)
Translates to: KRAHGTKFSTKSERALLIKKQKH*SWRGRS
Trigger: GGACCTGCCACGCCATGAGCAGTGTTTTTGCTTTTT...GATAAGTAAAGCTCTTTCTGATTTAGTTGAAAATTTCGTACCATGTGCTCGCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR CCA 90 bp TCGCCTCTATTTGTGAGCATGGATCTCATCCTCAAAGTCATAATAGTAAGTCCTCAAATGAACCTTGATTaGCAATACAGAAGGGATTGC +
Preference number: 4 (lower is better)
Translates to: SPLFVSMDLILKVIIVSPQMNLD*QYRRDC
Trigger: GCAATCCCTTCTGTATTGCCAATCAAGGTTCATTTG...AGGACTTACTATTATGACTTTGAGGATGAGATCCATGCTCACAAATAGAGGCGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
3UTR CAA 72 bp GGAATATTTTTGCACCAACCTTTTTCCTACACAGTGTaGGACGCAGACTTAGAACACCACTTTGAATTGGAA +
Preference number: 4 (lower is better)
Translates to: GIFLHQPFSYTV*DADLEHHFELE
Trigger: TTCCAATTCAAAGTGGTGTTCTAAGTCTGCGTCCAACACTGTGTAGGAAAAAGGTTGGTGCAAAAATATTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR TCA 90 bp AAGCGAGCACATGGTACGAAATTTTCAACTAAATCAGAAAGAGCTTTACTTATCTTTAACACCGTGTCTTaGAAAGAGTCCCCTTATGGG +
Preference number: 4 (lower is better)
Translates to: KRAHGTKFSTKSERALLIFNTVS*KESPYG
Trigger: CCCATAAGGGGACTCTTTTCAAGACACGGTGTTAAA...GATAAGTAAAGCTCTTTCTGATTTAGTTGAAAATTTCGTACCATGTGCTCGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR TCA 90 bp TCGCCTCTATTTGTGAGCATGGATCTCATCCTCAAAGTCATAATAGTAAGTCCTGAGAAACGACCCAACTaGTTTGTTTTTAATCCTCAT +
Preference number: 4 (lower is better)
Translates to: SPLFVSMDLILKVIIVSPEKRPN*FVFNPH
Trigger: ATGAGGATTAAAAACAAATCAGTTGGGTCGTTTCTC...AGGACTTACTATTATGACTTTGAGGATGAGATCCATGCTCACAAATAGAGGCGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR TCA 90 bp GCCAACCAAAGCGAGCACATGGTACGAAATTTTCAACTAAATCAGAAAGAGCTTGCTCGTGTTTTCTTATaGACAATAACATTGCAGAAG +
Preference number: 4 (lower is better)
Translates to: ANQSEHMVRNFQLNQKELARVFL*TITLQK
Trigger: CTTCTGCAATGTTATTGTTCATAAGAAAACACGAGC...AAGCTCTTTCTGATTTAGTTGAAAATTTCGTACCATGTGCTCGCTTTGGTTGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR GCA 90 bp AAGCGAGCACATGGTACGAAATTTTCAACTAAATCAGAAAGAGCTTTACTTATCCTCATACCCTGTCAATaGAGTGAGCCTCGTGTTAAT +
Preference number: 4 (lower is better)
Translates to: KRAHGTKFSTKSERALLILIPCQ*SEPRVN
Trigger: ATTAACACGAGGCTCACTGCATTGACAGGGTATGAG...GATAAGTAAAGCTCTTTCTGATTTAGTTGAAAATTTCGTACCATGTGCTCGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR GCA 90 bp TCGCCTCTATTTGTGAGCATGGATCTCATCCTCAAAGTCATAATAGTAAGTCCTGACCAGGAATATTTTTaGACCAACCTTTTTCCTACA +
Preference number: 4 (lower is better)
Translates to: SPLFVSMDLILKVIIVSPDQEYF*TNLFPT
Trigger: TGTAGGAAAAAGGTTGGTGCAAAAATATTCCTGGTC...AGGACTTACTATTATGACTTTGAGGATGAGATCCATGCTCACAAATAGAGGCGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR CCA 90 bp AAGCGAGCACATGGTACGAAATTTTCAACTAAATCAGAAAGAGCTTTACTTATCGATTATGAAAGCGGCTaGGCATACAGAGTGGACTAT +
Preference number: 4 (lower is better)
Translates to: KRAHGTKFSTKSERALLIDYESG*AYRVDY
Trigger: ATAGTCCACTCTGTATGCCCAGCCGCTTTCATAATC...GATAAGTAAAGCTCTTTCTGATTTAGTTGAAAATTTCGTACCATGTGCTCGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR CCA 90 bp TCGCCTCTATTTGTGAGCATGGATCTCATCCTCAAAGTCATAATAGTAAGTCCTGGGACAGTGTTACTCTaGAAGCCTAATTTCAATATT +
Preference number: 4 (lower is better)
Translates to: SPLFVSMDLILKVIIVSPGTVLL*KPNFNI
Trigger: AATATTGAAATTAGGCTTCCAGAGTAACACTGTCCC...AGGACTTACTATTATGACTTTGAGGATGAGATCCATGCTCACAAATAGAGGCGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR TCA 90 bp AAGCGAGCACATGGTACGAAATTTTCAACTAAATCAGAAAGAGCTTTACTTATCCAAGAGATTATGTCTTaGATCTATCCTGACTTCAGC +
Preference number: 4 (lower is better)
Translates to: KRAHGTKFSTKSERALLIQEIMS*IYPDFS
Trigger: GCTGAAGTCAGGATAGATTCAAGACATAATCTCTTG...GATAAGTAAAGCTCTTTCTGATTTAGTTGAAAATTTCGTACCATGTGCTCGCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
3UTR CAA 72 bp TTACCTTTAATGCTTATTAAATTACTCTTTTTGGAGTaGAGCCAACCAAAGCGAGCACATGGTACGAAATTT +
Preference number: 4 (lower is better)
Translates to: LPLMLIKLLFLE*SQPKRAHGTKF
Trigger: AAATTTCGTACCATGTGCTCGCTTTGGTTGGCTCAACTCCAAAAAGAGTAATTTAATAAGCATTAAAGGTAA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS GCA 90 bp GTGGGAGCCGCGGCCCGGCCTCTCCGAGCACCTGCGAGCGGGAGCTaGTCCTCCGACCCGCAGCGGGGCGTGGGCGGCAGAGGGGGCGGT +
Preference number: 5 (lower is better)
Translates to: VGAAARPLRAPASGS*SSDPQRGVGGRGGG
Trigger: ACCGCCCCCTCTGCCGCCCACGCCCCGCTGCGGGTCGGAGGAGCAGCTCCCGCTCGCAGGTGCTCGGAGAGGCCGGGCCGCGGCTCCCAC
80% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320248.4
CDS CCA 90 bp GCGGGTGGGCTCCGGCGCATGCGCGCGGCCGCTTCCCGGCACCTGTaGGAGCCGCGGCCCGGCCTCTCCGAGCACCTGCGAGCGGGAGCT +
Preference number: 5 (lower is better)
Translates to: AGGLRRMRAAASRHL*EPRPGLSEHLRAGA
Trigger: AGCTCCCGCTCGCAGGTGCTCGGAGAGGCCGGGCCGCGGCTCCCACAGGTGCCGGGAAGCGGCCGCGCGCATGCGCCGGAGCCCACCCGC
80% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320248.4
CDS GCA 90 bp CTTCCCGGCACCTGTGGGAGCCGCGGCCCGGCCTCTCCGAGCACCTaGGAGCGGGAGCTGCTCCTCCGACCCGCAGCGGGGCGTGGGCGG +
Preference number: 5 (lower is better)
Translates to: LPGTCGSRGPASPST*ERELLLRPAAGRGR
Trigger: CCGCCCACGCCCCGCTGCGGGTCGGAGGAGCAGCTCCCGCTCGCAGGTGCTCGGAGAGGCCGGGCCGCGGCTCCCACAGGTGCCGGGAAG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320248.4
CDS GCA 90 bp CGTCGCCGCCGGCCTCGCCTTCCCGGGCAGGCTGGAAGCGCCAGGTaGCCGCGCGGCTCACGCAGTAGATGGCGCCGTCCAGGGCGGCGC +
Preference number: 5 (lower is better)
Translates to: RRRRPRLPGQAGSAR*PRGSRSRWRRPGRR
Trigger: GCGCCGCCCTGGACGGCGCCATCTACTGCGTGAGCCGCGCGGGCACCTGGCGCTTCCAGCCTGCCCGGGAAGGCGAGGCCGGCGGCGACG
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS GCA 90 bp GACGTCCAAGGGGGCGCCCAGCGCCTCGAAGCCGCCGCCCTGGCCTaGGTCGCCGCCGGCCTCGCCTTCCCGGGCAGGCTGGAAGCGCCA +
Preference number: 5 (lower is better)
Translates to: DVQGGAQRLEAAALA*VAAGLAFPGRLEAP
Trigger: TGGCGCTTCCAGCCTGCCCGGGAAGGCGAGGCCGGCGGCGACGCAGGCCAGGGCGGCGGCTTCGAGGCGCTGGGCGCCCCCTTGGACGTC
79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS CCA 90 bp CTGCTCCTCCGACCCGCAGCGGGGCGTGGGCGGCAGAGGGGGCGGTaGACAGGCCTCTCCGCCTCTCCAGGCCGCGCGGAGCCAGCGCTC +
Preference number: 5 (lower is better)
Translates to: LLLRPAAGRGRQRGR*TGLSASPGRAEPAL
Trigger: GAGCGCTGGCTCCGCGCGGCCTGGAGAGGCGGAGAGGCCTGTCCACCGCCCCCTCTGCCGCCCACGCCCCGCTGCGGGTCGGAGGAGCAG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320248.4
CDS CCA 90 bp ACTGCCGCTCCACCACCCGCGGGCCACCGCTGGAGGGCGGGGAGGTaGCCGCGCCTTCCGCCGCTGAGGCGAGGGACTGCGGCGGGGACT +
Preference number: 5 (lower is better)
Translates to: TAAPPPAGHRWRAGR*PRLPPLRRGTAAGT
Trigger: AGTCCCCGCCGCAGTCCCTCGCCTCAGCGGCGGAAGGCGCGGCCACCTCCCCGCCCTCCAGCGGTGGCCCGCGGGTGGTGGAGCGGCAGT
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS GCA 90 bp GACGCAGGGGGCCACCGCGTGCTCCATGGCCGGGCTGTGCTGCGCTaGGCCCGCGCGCCCCCGGTTCCGCAGCCTGCAGGTCTGGCCAAG +
Preference number: 5 (lower is better)
Translates to: DAGGHRVLHGRAVLR*ARAPPVPQPAGLAK
Trigger: CTTGGCCAGACCTGCAGGCTGCGGAACCGGGGGCGCGCGGGCGCAGCGCAGCACAGCCCGGCCATGGAGCACGCGGTGGCCCCCTGCGTC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS GCA 90 bp CGCCGGCCACCACCTCGGCCACGTTGTCGGGCCGCACGCCCGCCATaGGCCCGCTGTAGGCGTCGGCGAGGAGCAGCCGCAGCGCCGTCA +
Preference number: 5 (lower is better)
Translates to: RRPPPRPRCRAARPP*ARCRRRRGAAAAPS
Trigger: TGACGGCGCTGCGGCTGCTCCTCGCCGACGCCTACAGCGGGCGCATGGCGGGCGTGCGGCCCGACAACGTGGCCGAGGTGGTGGCCGGCG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS TCA 90 bp CCGCCGCTGAGGCGAGGGACTGCGGCGGGGACTCTTCCCCGGAGCTaGAGCACAGGGACGCGCCGAGACTGCAGGGTGTCTGCGCCGGGG +
Preference number: 5 (lower is better)
Translates to: PPLRRGTAAGTLPRS*STGTRRDCRVSAPG
Trigger: CCCCGGCGCAGACACCCTGCAGTCTCGGCGCGTCCCTGTGCTTCAGCTCCGGGGAAGAGTCCCCGCCGCAGTCCCTCGCCTCAGCGGCGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS CCA 90 bp CGTTCAGCCGCTGCCGCTTGGCCGCGCTCAGGACCTCGTAGCAGTTaGCCAGGCTCAGCTGCGGCCCCACGGCGTCGGTGGCGCGCTGCG +
Preference number: 5 (lower is better)
Translates to: RSAAAAWPRSGPRSS*PGSAAAPRRRWRAA
Trigger: CGCAGCGCGCCACCGACGCCGTGGGGCCGCAGCTGAGCCTGGCCAACTGCTACGAGGTCCTGAGCGCGGCCAAGCGGCAGCGGCTGAACG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR CAA 90 bp TCCTCCTCCGCGGGCCCAAAGGGACCTGGGCCCCGCAAACCCCTGCCGAGGGAGGGAGCACCTGGGGCTTaGCTGCCGGGCCCCACAGGA +
Preference number: 5 (lower is better)
Translates to: SSSAGPKGPGPRKPLPREGAPGA*LPGPTG
Trigger: TCCTGTGGGGCCCGGCAGCAAAGCCCCAGGTGCTCC...CTCCCTCGGCAGGGGTTTGCGGGGCCCAGGTCCCTTTGGGCCCGCGGAGGAGGA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS TCA 90 bp CCGCCTGCGCCTCGCCGCGGCTGCCGCTCAGATCGAAGCGGTAGATaGAGCCGTCGAGAGCCACCATGTCGGCCGAGCGCTCGCGGCTGC +
Preference number: 5 (lower is better)
Translates to: PPAPRRGCRSDRSGR*SRREPPCRPSARGC
Trigger: GCAGCCGCGAGCGCTCGGCCGACATGGTGGCTCTCGACGGCTTCATCTACCGCTTCGATCTGAGCGGCAGCCGCGGCGAGGCGCAGGCGG
72% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR CAA 90 bp TTGAGGGTCCCAGGCTCCTGCGCACAGCCTCGGTGCTCTGCGGGGTTCGGGACAACCACCTCGGCCACGTaGTCGGGCCGCACGCCCGCC +
Preference number: 5 (lower is better)
Translates to: LRVPGSCAQPRCSAGFGTTTSAT*SGRTPA
Trigger: GGCGGGCGTGCGGCCCGACAACGTGGCCGAGGTGGT...TGTCCCGAACCCCGCAGAGCACCGAGGCTGTGCGCAGGAGCCTGGGACCCTCAA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS CCA 90 bp TGCTGCGCTGCGCCCGCGCGCCCCCGGTTCCGCAGCCTGCAGGTCTaGCCAAGGTCGAGCCTTACTCCGGGGTTTCCAGCCTCACAGCTT +
Preference number: 5 (lower is better)
Translates to: CCAAPARPRFRSLQV*PRSSLTPGFPASQL
Trigger: AAGCTGTGAGGCTGGAAACCCCGGAGTAAGGCTCGACCTTGGCCAGACCTGCAGGCTGCGGAACCGGGGGCGCGCGGGCGCAGCGCAGCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS TCA 90 bp TGCTGCACGGGCACTCCTGCCACTCGTCGCGCCGCGGGTCATACTTaGGCAGGCGATAGAAGAGGGAGCCCCCGGACACGTAGATCTCGC +
Preference number: 5 (lower is better)
Translates to: CCTGTPATRRAAGHT*AGDRRGSPRTRRSR
Trigger: GCGAGATCTACGTGTCCGGGGGCTCCCTCTTCTATCGCCTGCTCAAGTATGACCCGCGGCGCGACGAGTGGCAGGAGTGCCCGTGCAGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR CAA 90 bp TCCTCCTCCGCGGGCCCAAAGGGACCTGGGCCCCGCAAACCCCTGCCGAGGGAGACTAGCTATCCCTCTTaGCAACGCTGGCTGACTAGG +
Preference number: 5 (lower is better)
Translates to: SSSAGPKGPGPRKPLPRETSYPS*QRWLTR
Trigger: CCTAGTCAGCCAGCGTTGCAAAGAGGGATAGCTAGT...CTCCCTCGGCAGGGGTTTGCGGGGCCCAGGTCCCTTTGGGCCCGCGGAGGAGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR CAA 90 bp TTGAGGGTCCCAGGCTCCTGCGCACAGCCTCGGTGCTCTGCGGGGTTCGGGACACCAGATAACCAGGTATaGGGTGCGCCCTCGCTCTCA +
Preference number: 5 (lower is better)
Translates to: LRVPGSCAQPRCSAGFGTPDNQV*GAPSLS
Trigger: TGAGAGCGAGGGCGCACCCAATACCTGGTTATCTGG...TGTCCCGAACCCCGCAGAGCACCGAGGCTGTGCGCAGGAGCCTGGGACCCTCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR CAA 90 bp TTGAGGGTCCCAGGCTCCTGCGCACAGCCTCGGTGCTCTGCGGGGTTCGGGACATCACGAGTCAGACATTaGGAAATGCCCCGGCATACG +
Preference number: 5 (lower is better)
Translates to: LRVPGSCAQPRCSAGFGTSRVRH*EMPRHT
Trigger: CGTATGCCGGGGCATTTCCAAATGTCTGACTCGTGA...TGTCCCGAACCCCGCAGAGCACCGAGGCTGTGCGCAGGAGCCTGGGACCCTCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS TCA 90 bp GGATCTCCAGCTGGCGCCAGGACCGCGTCAGCCAACATCCAGCAATaGCTGGAGCTGCAGTTGACTGCGGTTGTTTCTGCAGCCTGGGTG +
Preference number: 5 (lower is better)
Translates to: GSPAGARTASANIQQ*LELQLTAVVSAAWV
Trigger: CACCCAGGCTGCAGAAACAACCGCAGTCAACTGCAGCTCCAGTCATTGCTGGATGTTGGCTGACGCGGTCCTGGCGCCAGCTGGAGATCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS CCA 90 bp GCTACACAACTGCAAGGTCACGGGGAGGACACTGGTCCTGTGTGCTaGTCTCAGGAGCTCTCCCCGTGTGTCGGCATCCACACCTCCTCA +
Preference number: 5 (lower is better)
Translates to: ATQLQGHGEDTGPVC*SQELSPCVGIHTSS
Trigger: TGAGGAGGTGTGGATGCCGACACACGGGGAGAGCTCCTGAGACCAGCACACAGGACCAGTGTCCTCCCCGTGACCTTGCAGTTGTGTAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR CAA 90 bp TTGAGGGTCCCAGGCTCCTGCGCACAGCCTCGGTGCTCTGCGGGGTTCGGGACACCTCTGCAGCTTCCTTaGCTGGGATATCAGGTGTTT +
Preference number: 5 (lower is better)
Translates to: LRVPGSCAQPRCSAGFGTPLQLP*LGYQVF
Trigger: AAACACCTGATATCCCAGCAAAGGAAGCTGCAGAGG...TGTCCCGAACCCCGCAGAGCACCGAGGCTGTGCGCAGGAGCCTGGGACCCTCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR CAA 90 bp AAACGCTGGAAAGCCATGGGAACCGCACAGGACTGTGCAACCACCCCCATCCAACACGGGCTCCACTGCTaGGCCAGGCAGTGGTATCGG +
Preference number: 5 (lower is better)
Translates to: KRWKAMGTAQDCATTPIQHGLHC*ARQWYR
Trigger: CCGATACCACTGCCTGGCCAAGCAGTGGAGCCCGTG...TTGGATGGGGGTGGTTGCACAGTCCTGTGCGGTTCCCATGGCTTTCCAGCGTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR CAA 90 bp CACTGTACCCTGAGGCTGACCCTTTGGATCCCACAGCCTTCTCTGTGTCCTGTCTTCGCGGCGACCTACTaGAGGGTCCCAGGCTCCTGC +
Preference number: 5 (lower is better)
Translates to: HCTLRLTLWIPQPSLCPVFAATY*RVPGSC
Trigger: GCAGGAGCCTGGGACCCTCAAGTAGGTCGCCGCGAA...GACAGGACACAGAGAAGGCTGTGGGATCCAAAGGGTCAGCCTCAGGGTACAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR CAA 90 bp ATCCCGAAGTTCCAAATCCAGCTCTACAAAGCTGCAGGAAGCAGTGCGGAGTGGGGAGCACCTGGGGCTTaGCTGCCGGGCCCCACAGGA +
Preference number: 5 (lower is better)
Translates to: IPKFQIQLYKAAGSSAEWGAPGA*LPGPTG
Trigger: TCCTGTGGGGCCCGGCAGCAAAGCCCCAGGTGCTCC...CCACTCCGCACTGCTTCCTGCAGCTTTGTAGAGCTGGATTTGGAACTTCGGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR CAA 90 bp TCCTCCTCCGCGGGCCCAAAGGGACCTGGGCCCCGCAAACCCCTGCCGAGGGAGAATTTCCACAATAGGTaGGCCGGACATCCTTTAATG +
Preference number: 5 (lower is better)
Translates to: SSSAGPKGPGPRKPLPRENFHNR*AGHPLM
Trigger: CATTAAAGGATGTCCGGCCAACCTATTGTGGAAATT...CTCCCTCGGCAGGGGTTTGCGGGGCCCAGGTCCCTTTGGGCCCGCGGAGGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR CAA 90 bp TTGAGGGTCCCAGGCTCCTGCGCACAGCCTCGGTGCTCTGCGGGGTTCGGGACATGCCTTTTCAGACATTaGGAAAGGCCCCTGCGTATG +
Preference number: 5 (lower is better)
Translates to: LRVPGSCAQPRCSAGFGTCLFRH*ERPLRM
Trigger: CATACGCAGGGGCCTTTCCAAATGTCTGAAAAGGCA...TGTCCCGAACCCCGCAGAGCACCGAGGCTGTGCGCAGGAGCCTGGGACCCTCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS GCA 90 bp TGCGCCCTCGCTCTCAGGAGTCCGTGCTCACCCACTCACTTCACATaGTGTCATATCACCGCGCCCCCAGAACACAGAAAGCTGAGACCG +
Preference number: 5 (lower is better)
Translates to: CALALRSPCSPTHFT*CHITAPPEHRKLRP
Trigger: CGGTCTCAGCTTTCTGTGTTCTGGGGGCGCGGTGATATGACAGCATGTGAAGTGAGTGGGTGAGCACGGACTCCTGAGAGCGAGGGCGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR CAA 90 bp TCTCAGCAATGCCTCTGCCCTCCCTGCAGCAGTCCCAAAATGAAAGCCACACCTTTCGCGGCGACCTACTaGAGGGTCCCAGGCTCCTGC +
Preference number: 5 (lower is better)
Translates to: SQQCLCPPCSSPKMKATPFAATY*RVPGSC
Trigger: GCAGGAGCCTGGGACCCTCAAGTAGGTCGCCGCGAA...AGGTGTGGCTTTCATTTTGGGACTGCTGCAGGGAGGGCAGAGGCATTGCTGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS GCA 90 bp GCTGTCCTCGCTCACGGGGCAGGACCCTTCCTCTGCAGCTTCCTTTaGTGGGATATCAGGTGTTTCCGCGTCCTCTCACCACACTCTTGT +
Preference number: 5 (lower is better)
Translates to: AVLAHGAGPFLCSFL*WDIRCFRVLSPHSC
Trigger: ACAAGAGTGTGGTGAGAGGACGCGGAAACACCTGATATCCCAGCAAAGGAAGCTGCAGAGGAAGGGTCCTGCCCCGTGAGCGAGGACAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS CCA 90 bp GTCCTCGCTCACGGGGCAGGACCCTTCCTCTGCAGCTTCCTTTGCTaGGATATCAGGTGTTTCCGCGTCCTCTCACCACACTCTTGTTCC +
Preference number: 5 (lower is better)
Translates to: VLAHGAGPFLCSFLC*DIRCFRVLSPHSCS
Trigger: GGAACAAGAGTGTGGTGAGAGGACGCGGAAACACCTGATATCCCAGCAAAGGAAGCTGCAGAGGAAGGGTCCTGCCCCGTGAGCGAGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR CAA 90 bp TTGAGGGTCCCAGGCTCCTGCGCACAGCCTCGGTGCTCTGCGGGGTTCGGGACATTACTCTTTTTGGAGTaGAGCCAACCAAAGCGAGCA +
Preference number: 5 (lower is better)
Translates to: LRVPGSCAQPRCSAGFGTLLFLE*SQPKRA
Trigger: TGCTCGCTTTGGTTGGCTCAACTCCAAAAAGAGTAA...TGTCCCGAACCCCGCAGAGCACCGAGGCTGTGCGCAGGAGCCTGGGACCCTCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS GCA 90 bp GTCGGCATCCACACCTCCTCATATACGGGGTCATCCGTAATTCACTaGCAGGGGGATGTTAGGAGAAGCCGCTGTGCTCCTGGAGGCTGT +
Preference number: 5 (lower is better)
Translates to: VGIHTSSYTGSSVIH*QGDVRRSRCAPGGC
Trigger: ACAGCCTCCAGGAGCACAGCGGCTTCTCCTAACATCCCCCTGGCAGTGAATTACGGATGACCCCGTATATGAGGAGGTGTGGATGCCGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS GCA 90 bp TTATGGGCTCTCCTTCTCTGTGGCTCCCACTTGTGGCTACACAACTaGAAGGTCACGGGGAGGACACTGGTCCTGTGTGCTGGTCTCAGG +
Preference number: 5 (lower is better)
Translates to: LWALLLCGSHLWLHN*KVTGRTLVLCAGLR
Trigger: CCTGAGACCAGCACACAGGACCAGTGTCCTCCCCGTGACCTTGCAGTTGTGTAGCCACAAGTGGGAGCCACAGAGAAGGAGAGCCCATAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS GCA 90 bp GACCGCGTCAGCCAACATCCAGCAATGACTGGAGCTGCAGTTGACTaGGGTTGTTTCTGCAGCCTGGGTGACCAGGTGTCTCTCTCTGCA +
Preference number: 5 (lower is better)
Translates to: DRVSQHPAMTGAAVD*GCFCSLGDQVSLSA
Trigger: TGCAGAGAGAGACACCTGGTCACCCAGGCTGCAGAAACAACCGCAGTCAACTGCAGCTCCAGTCATTGCTGGATGTTGGCTGACGCGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR CAA 90 bp TCTGTCAAGGGACCCATCCGCACACCTCCTGGGTCTCAAGGCATCCACCCCCAGCCTCTGCAGCTTCCTTaGCTGGGATATCAGGTGTTT +
Preference number: 5 (lower is better)
Translates to: SVKGPIRTPPGSQGIHPQPLQLP*LGYQVF
Trigger: AAACACCTGATATCCCAGCAAAGGAAGCTGCAGAGG...CTGGGGGTGGATGCCTTGAGACCCAGGAGGTGTGCGGATGGGTCCCTTGACAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR CAA 90 bp TCTCAGCAATGCCTCTGCCCTCCCTGCAGCAGTCCCAAAATGAAAGCCACACCTCTGGGGCATCAGCCGTaGCCAGGCAGTCTCAGCAAT +
Preference number: 5 (lower is better)
Translates to: SQQCLCPPCSSPKMKATPLGHQP*PGSLSN
Trigger: ATTGCTGAGACTGCCTGGCAACGGCTGATGCCCCAG...AGGTGTGGCTTTCATTTTGGGACTGCTGCAGGGAGGGCAGAGGCATTGCTGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR CAA 90 bp AGTCTGTTTTTCTTTCCCAAGATGATTAACCAAGTTGCCAAGCTATCCCCTCAGACCACCTCGGCCACGTaGTCGGGCCGCACGCCCGCC +
Preference number: 5 (lower is better)
Translates to: SLFFFPKMINQVAKLSPQTTSAT*SGRTPA
Trigger: GGCGGGCGTGCGGCCCGACAACGTGGCCGAGGTGGT...CTGAGGGGATAGCTTGGCAACTTGGTTAATCATCTTGGGAAAGAAAAACAGACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR CAA 90 bp TTGAGGGTCCCAGGCTCCTGCGCACAGCCTCGGTGCTCTGCGGGGTTCGGGACAAACGACCCAACTGATTaGTTTTTAATCCTCATACCC +
Preference number: 5 (lower is better)
Translates to: LRVPGSCAQPRCSAGFGTNDPTD*FLILIP
Trigger: GGGTATGAGGATTAAAAACAAATCAGTTGGGTCGTT...TGTCCCGAACCCCGCAGAGCACCGAGGCTGTGCGCAGGAGCCTGGGACCCTCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS TCA 90 bp GGTTGTTTCTGCAGCCTGGGTGACCAGGTGTCTCTCTCTGCAGCCTaGGTGACTAGCTATCCCTCTTTGCAACGCTGGCTGACTAGGTGT +
Preference number: 5 (lower is better)
Translates to: GCFCSLGDQVSLSAA*VTSYPSLQRWLTRC
Trigger: ACACCTAGTCAGCCAGCGTTGCAAAGAGGGATAGCTAGTCACTCAGGCTGCAGAGAGAGACACCTGGTCACCCAGGCTGCAGAAACAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR CAA 90 bp GCAGTGCGGAGTGGAGGGATGTTCCCAAGAGGAAGAATAAAACCGGAAGGAAAACCTCTCACCACACTCTaGTTCCTCGCCGCGGCTCCT +
Preference number: 5 (lower is better)
Translates to: AVRSGGMFPRGRIKPEGKPLTTL*FLAAAP
Trigger: AGGAGCCGCGGCGAGGAACAAGAGTGTGGTGAGAGG...TTTTCCTTCCGGTTTTATTCTTCCTCTTGGGAACATCCCTCCACTCCGCACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR CAA 90 bp AAACGCTGGAAAGCCATGGGAACCGCACAGGACTGTGCAACCACCCCCATCCAATCACGAGTCAGACATTaGGAAATGCCCCGGCATACG +
Preference number: 5 (lower is better)
Translates to: KRWKAMGTAQDCATTPIQSRVRH*EMPRHT
Trigger: CGTATGCCGGGGCATTTCCAAATGTCTGACTCGTGA...TTGGATGGGGGTGGTTGCACAGTCCTGTGCGGTTCCCATGGCTTTCCAGCGTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR CAA 90 bp CACTGTACCCTGAGGCTGACCCTTTGGATCCCACAGCCTTCTCTGTGTCCTGTCACAGCTGCCCTGAACTaGGCCTTCAACAGGTGTAGT +
Preference number: 5 (lower is better)
Translates to: HCTLRLTLWIPQPSLCPVTAALN*AFNRCS
Trigger: ACTACACCTGTTGAAGGCCAAGTTCAGGGCAGCTGT...GACAGGACACAGAGAAGGCTGTGGGATCCAAAGGGTCAGCCTCAGGGTACAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR CAA 90 bp ATCCCGAAGTTCCAAATCCAGCTCTACAAAGCTGCAGGAAGCAGTGCGGAGTGGCTCTGTGGCTCCCACTaGTGGCTACACAACTGCAAG +
Preference number: 5 (lower is better)
Translates to: IPKFQIQLYKAAGSSAEWLCGSH*WLHNCK
Trigger: CTTGCAGTTGTGTAGCCACAAGTGGGAGCCACAGAG...CCACTCCGCACTGCTTCCTGCAGCTTTGTAGAGCTGGATTTGGAACTTCGGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR CAA 90 bp AAACGCTGGAAAGCCATGGGAACCGCACAGGACTGTGCAACCACCCCCATCCAATCTGCCCAGAAAGTCTaGGTGAATGGATCTCCAGCT +
Preference number: 5 (lower is better)
Translates to: KRWKAMGTAQDCATTPIQSAQKV*VNGSPA
Trigger: AGCTGGAGATCCATTCACCAAGACTTTCTGGGCAGA...TTGGATGGGGGTGGTTGCACAGTCCTGTGCGGTTCCCATGGCTTTCCAGCGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR CAA 90 bp CACTGTACCCTGAGGCTGACCCTTTGGATCCCACAGCCTTCTCTGTGTCCTGTCAATGAAAGCCACACCTaGGAGGGTGTGGCTTTTCTC +
Preference number: 5 (lower is better)
Translates to: HCTLRLTLWIPQPSLCPVNESHT*EGVAFL
Trigger: GAGAAAAGCCACACCCTCCAAGGTGTGGCTTTCATT...GACAGGACACAGAGAAGGCTGTGGGATCCAAAGGGTCAGCCTCAGGGTACAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR CAA 90 bp TCTGTCAAGGGACCCATCCGCACACCTCCTGGGTCTCAAGGCATCCACCCCCAGGCAATACAGAAGGGATaGCTGTCAACTAAGCAAAAG +
Preference number: 5 (lower is better)
Translates to: SVKGPIRTPPGSQGIHPQAIQKG*LSTKQK
Trigger: CTTTTGCTTAGTTGACAGCAATCCCTTCTGTATTGC...CTGGGGGTGGATGCCTTGAGACCCAGGAGGTGTGCGGATGGGTCCCTTGACAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS CCA 90 bp CAAGGTCGAGCCTTACTCCGGGGTTTCCAGCCTCACAGCTTTTCCTaGCACGCGATCAGATTTCACTTCTGTGTGTCCACGCTTTGTTGT +
Preference number: 5 (lower is better)
Translates to: QGRALLRGFQPHSFS*HAIRFHFCVSTLCC
Trigger: ACAACAAAGCGTGGACACACAGAAGTGAAATCTGATCGCGTGCCAGGAAAAGCTGTGAGGCTGGAAACCCCGGAGTAAGGCTCGACCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR CAA 90 bp TCTCAGCAATGCCTCTGCCCTCCCTGCAGCAGTCCCAAAATGAAAGCCACACCTTCTAGGCATGTGAGTTaGAGTAGCAATGGTGTGGGG +
Preference number: 5 (lower is better)
Translates to: SQQCLCPPCSSPKMKATPSRHVS*SSNGVG
Trigger: CCCCACACCATTGCTACTCAAACTCACATGCCTAGA...AGGTGTGGCTTTCATTTTGGGACTGCTGCAGGGAGGGCAGAGGCATTGCTGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR CAA 90 bp TCTGTCAAGGGACCCATCCGCACACCTCCTGGGTCTCAAGGCATCCACCCCCAGAACGACCCAACTGATTaGTTTTTAATCCTCATACCC +
Preference number: 5 (lower is better)
Translates to: SVKGPIRTPPGSQGIHPQNDPTD*FLILIP
Trigger: GGGTATGAGGATTAAAAACAAATCAGTTGGGTCGTT...CTGGGGGTGGATGCCTTGAGACCCAGGAGGTGTGCGGATGGGTCCCTTGACAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR CAA 90 bp CACTGTACCCTGAGGCTGACCCTTTGGATCCCACAGCCTTCTCTGTGTCCTGTCTTTTCCTACACAGTGTaGGACGCAGACTTAGAACAC +
Preference number: 5 (lower is better)
Translates to: HCTLRLTLWIPQPSLCPVFSYTV*DADLEH
Trigger: GTGTTCTAAGTCTGCGTCCAACACTGTGTAGGAAAA...GACAGGACACAGAGAAGGCTGTGGGATCCAAAGGGTCAGCCTCAGGGTACAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR CAA 90 bp GCAGTGCGGAGTGGAGGGATGTTCCCAAGAGGAAGAATAAAACCGGAAGGAAAAACAGCTGCCCTGAACTaGGCCTTCAACAGGTGTAGT +
Preference number: 5 (lower is better)
Translates to: AVRSGGMFPRGRIKPEGKTAALN*AFNRCS
Trigger: ACTACACCTGTTGAAGGCCAAGTTCAGGGCAGCTGT...TTTTCCTTCCGGTTTTATTCTTCCTCTTGGGAACATCCCTCCACTCCGCACTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR CAA 90 bp TCGCCTCTATTTGTGAGCATGGATCTCATCCTCAAAGTCATAATAGTAAGTCCTCCTCTCACCACACTCTaGTTCCTCGCCGCGGCTCCT +
Preference number: 5 (lower is better)
Translates to: SPLFVSMDLILKVIIVSPPLTTL*FLAAAP
Trigger: AGGAGCCGCGGCGAGGAACAAGAGTGTGGTGAGAGG...AGGACTTACTATTATGACTTTGAGGATGAGATCCATGCTCACAAATAGAGGCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR CAA 90 bp GCAGTGCGGAGTGGAGGGATGTTCCCAAGAGGAAGAATAAAACCGGAAGGAAAATCTGCCCAGAAAGTCTaGGTGAATGGATCTCCAGCT +
Preference number: 5 (lower is better)
Translates to: AVRSGGMFPRGRIKPEGKSAQKV*VNGSPA
Trigger: AGCTGGAGATCCATTCACCAAGACTTTCTGGGCAGA...TTTTCCTTCCGGTTTTATTCTTCCTCTTGGGAACATCCCTCCACTCCGCACTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR CAA 90 bp GCCAACCAAAGCGAGCACATGGTACGAAATTTTCAACTAAATCAGAAAGAGCTTCTGGGGCATCAGCCGTaGCCAGGCAGTCTCAGCAAT +
Preference number: 5 (lower is better)
Translates to: ANQSEHMVRNFQLNQKELLGHQP*PGSLSN
Trigger: ATTGCTGAGACTGCCTGGCAACGGCTGATGCCCCAG...AAGCTCTTTCTGATTTAGTTGAAAATTTCGTACCATGTGCTCGCTTTGGTTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR CAA 90 bp GCCAACCAAAGCGAGCACATGGTACGAAATTTTCAACTAAATCAGAAAGAGCTTCCAGATAACCAGGTATaGGGTGCGCCCTCGCTCTCA +
Preference number: 5 (lower is better)
Translates to: ANQSEHMVRNFQLNQKELPDNQV*GAPSLS
Trigger: TGAGAGCGAGGGCGCACCCAATACCTGGTTATCTGG...AAGCTCTTTCTGATTTAGTTGAAAATTTCGTACCATGTGCTCGCTTTGGTTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR CAA 90 bp AGTCTGTTTTTCTTTCCCAAGATGATTAACCAAGTTGCCAAGCTATCCCCTCAGTCCAAATCCATCCACTaGGCGTGTCTGAAGCTCCTG +
Preference number: 5 (lower is better)
Translates to: SLFFFPKMINQVAKLSPQSKSIH*ACLKLL
Trigger: CAGGAGCTTCAGACACGCCAAGTGGATGGATTTGGA...CTGAGGGGATAGCTTGGCAACTTGGTTAATCATCTTGGGAAAGAAAAACAGACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR CAA 90 bp GCCAACCAAAGCGAGCACATGGTACGAAATTTTCAACTAAATCAGAAAGAGCTTACTAGCTATCCCTCTTaGCAACGCTGGCTGACTAGG +
Preference number: 5 (lower is better)
Translates to: ANQSEHMVRNFQLNQKELTSYPS*QRWLTR
Trigger: CCTAGTCAGCCAGCGTTGCAAAGAGGGATAGCTAGT...AAGCTCTTTCTGATTTAGTTGAAAATTTCGTACCATGTGCTCGCTTTGGTTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR CAA 90 bp AGTCTGTTTTTCTTTCCCAAGATGATTAACCAAGTTGCCAAGCTATCCCCTCAGTCTAGGCATGTGAGTTaGAGTAGCAATGGTGTGGGG +
Preference number: 5 (lower is better)
Translates to: SLFFFPKMINQVAKLSPQSRHVS*SSNGVG
Trigger: CCCCACACCATTGCTACTCAAACTCACATGCCTAGA...CTGAGGGGATAGCTTGGCAACTTGGTTAATCATCTTGGGAAAGAAAAACAGACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR CAA 90 bp AGTCTGTTTTTCTTTCCCAAGATGATTAACCAAGTTGCCAAGCTATCCCCTCAGTTTTCCTACACAGTGTaGGACGCAGACTTAGAACAC +
Preference number: 5 (lower is better)
Translates to: SLFFFPKMINQVAKLSPQFSYTV*DADLEH
Trigger: GTGTTCTAAGTCTGCGTCCAACACTGTGTAGGAAAA...CTGAGGGGATAGCTTGGCAACTTGGTTAATCATCTTGGGAAAGAAAAACAGACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR CAA 90 bp AGTCTGTTTTTCTTTCCCAAGATGATTAACCAAGTTGCCAAGCTATCCCCTCAGAATTTCCACAATAGGTaGGCCGGACATCCTTTAATG +
Preference number: 5 (lower is better)
Translates to: SLFFFPKMINQVAKLSPQNFHNR*AGHPLM
Trigger: CATTAAAGGATGTCCGGCCAACCTATTGTGGAAATT...CTGAGGGGATAGCTTGGCAACTTGGTTAATCATCTTGGGAAAGAAAAACAGACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR CAA 90 bp AAGCGAGCACATGGTACGAAATTTTCAACTAAATCAGAAAGAGCTTTACTTATCAATGAAAGCCACACCTaGGAGGGTGTGGCTTTTCTC +
Preference number: 5 (lower is better)
Translates to: KRAHGTKFSTKSERALLINESHT*EGVAFL
Trigger: GAGAAAAGCCACACCCTCCAAGGTGTGGCTTTCATT...GATAAGTAAAGCTCTTTCTGATTTAGTTGAAAATTTCGTACCATGTGCTCGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR CAA 90 bp AAGCGAGCACATGGTACGAAATTTTCAACTAAATCAGAAAGAGCTTTACTTATCTGCCTTTTCAGACATTaGGAAAGGCCCCTGCGTATG +
Preference number: 5 (lower is better)
Translates to: KRAHGTKFSTKSERALLICLFRH*ERPLRM
Trigger: CATACGCAGGGGCCTTTCCAAATGTCTGAAAAGGCA...GATAAGTAAAGCTCTTTCTGATTTAGTTGAAAATTTCGTACCATGTGCTCGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS-3UTR CAA 90 bp AAGCGAGCACATGGTACGAAATTTTCAACTAAATCAGAAAGAGCTTTACTTATCTTACTCTTTTTGGAGTaGAGCCAACCAAAGCGAGCA +
Preference number: 5 (lower is better)
Translates to: KRAHGTKFSTKSERALLILLFLE*SQPKRA
Trigger: TGCTCGCTTTGGTTGGCTCAACTCCAAAAAGAGTAA...GATAAGTAAAGCTCTTTCTGATTTAGTTGAAAATTTCGTACCATGTGCTCGCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS GCA 72 bp GCGGCCCGGCCTCTCCGAGCACCTGCGAGCGGGAGCTaGTCCTCCGACCCGCAGCGGGGCGTGGGCGGCAGA +
Preference number: 6 (lower is better)
Translates to: AARPLRAPASGS*SSDPQRGVGGR
Trigger: TCTGCCGCCCACGCCCCGCTGCGGGTCGGAGGAGCAGCTCCCGCTCGCAGGTGCTCGGAGAGGCCGGGCCGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320248.4
CDS GCA 72 bp GGCCACCGCGTGCTCCATGGCCGGGCTGTGCTGCGCTaGGCCCGCGCGCCCCCGGTTCCGCAGCCTGCAGGT +
Preference number: 6 (lower is better)
Translates to: GHRVLHGRAVLR*ARAPPVPQPAG
Trigger: ACCTGCAGGCTGCGGAACCGGGGGCGCGCGGGCGCAGCGCAGCACAGCCCGGCCATGGAGCACGCGGTGGCC
79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS GCA 72 bp GCGAGGAGCAGCCGCAGCGCCGTCAGGCTCACTCCCTaGACCCGCAGCACGTCCCGCGACGCGCGCGCGCGG +
Preference number: 6 (lower is better)
Translates to: ARSSRSAVRLTP*TRSTSRDARAR
Trigger: CCGCGCGCGCGCGTCGCGGGACGTGCTGCGGGTGCAGGGAGTGAGCCTGACGGCGCTGCGGCTGCTCCTCGC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS CCA 72 bp CTCCGGCGCATGCGCGCGGCCGCTTCCCGGCACCTGTaGGAGCCGCGGCCCGGCCTCTCCGAGCACCTGCGA +
Preference number: 6 (lower is better)
Translates to: LRRMRAAASRHL*EPRPGLSEHLR
Trigger: TCGCAGGTGCTCGGAGAGGCCGGGCCGCGGCTCCCACAGGTGCCGGGAAGCGGCCGCGCGCATGCGCCGGAG
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320248.4
CDS GCA 72 bp CCACCTCGGCCACGTTGTCGGGCCGCACGCCCGCCATaGGCCCGCTGTAGGCGTCGGCGAGGAGCAGCCGCA +
Preference number: 6 (lower is better)
Translates to: PPRPRCRAARPP*ARCRRRRGAAA
Trigger: TGCGGCTGCTCCTCGCCGACGCCTACAGCGGGCGCATGGCGGGCGTGCGGCCCGACAACGTGGCCGAGGTGG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS GCA 72 bp GCTGCGCTGCGCCCGCGCGCCCCCGGTTCCGCAGCCTaGAGGTCTGGCCAAGGTCGAGCCTTACTCCGGGGT +
Preference number: 6 (lower is better)
Translates to: AALRPRAPGSAA*RSGQGRALLRG
Trigger: ACCCCGGAGTAAGGCTCGACCTTGGCCAGACCTGCAGGCTGCGGAACCGGGGGCGCGCGGGCGCAGCGCAGC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS GCA 72 bp GAGCCACCATGTCGGCCGAGCGCTCGCGGCTGCTGCTaGACGGGCACTCCTGCCACTCGTCGCGCCGCGGGT +
Preference number: 6 (lower is better)
Translates to: EPPCRPSARGCC*TGTPATRRAAG
Trigger: ACCCGCGGCGCGACGAGTGGCAGGAGTGCCCGTGCAGCAGCAGCCGCGAGCGCTCGGCCGACATGGTGGCTC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS GCA 72 bp CGAGAGCCACCATGTCGGCCGAGCGCTCGCGGCTGCTaGTGCACGGGCACTCCTGCCACTCGTCGCGCCGCG +
Preference number: 6 (lower is better)
Translates to: REPPCRPSARGC*CTGTPATRRAA
Trigger: CGCGGCGCGACGAGTGGCAGGAGTGCCCGTGCAGCAGCAGCCGCGAGCGCTCGGCCGACATGGTGGCTCTCG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS GCA 72 bp CGGCCTCGCCTTCCCGGGCAGGCTGGAAGCGCCAGGTaGCCGCGCGGCTCACGCAGTAGATGGCGCCGTCCA +
Preference number: 6 (lower is better)
Translates to: RPRLPGQAGSAR*PRGSRSRWRRP
Trigger: TGGACGGCGCCATCTACTGCGTGAGCCGCGCGGGCACCTGGCGCTTCCAGCCTGCCCGGGAAGGCGAGGCCG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS CCA 72 bp GGGAGCCCCCGGACACGTAGATCTCGCCGTGGCAGGTaGTGGCCTCATGCGCCACGGCGAAGGCGCCCCGGG +
Preference number: 6 (lower is better)
Translates to: GSPRTRRSRRGR*WPHAPRRRRPG
Trigger: CCCGGGGCGCCTTCGCCGTGGCGCATGAGGCCACCACCTGCCACGGCGAGATCTACGTGTCCGGGGGCTCCC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS CCA 72 bp GGCGCGACGCACGGGCTCCACTGCTTGGCCAGGCAGTaGTATCGGGACACGCTGACCCCGCTCGGCCCCGCC +
Preference number: 6 (lower is better)
Translates to: GATHGLHCLARQ*YRDTLTPLGPA
Trigger: GGCGGGGCCGAGCGGGGTCAGCGTGTCCCGATACCACTGCCTGGCCAAGCAGTGGAGCCCGTGCGTCGCGCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS GCA 72 bp GAGGTGGCCGCGCCTTCCGCCGCTGAGGCGAGGGACTaGGGCGGGGACTCTTCCCCGGAGCTGAAGCACAGG +
Preference number: 6 (lower is better)
Translates to: EVAAPSAAEARD*GGDSSPELKHR
Trigger: CCTGTGCTTCAGCTCCGGGGAAGAGTCCCCGCCGCAGTCCCTCGCCTCAGCGGCGGAAGGCGCGGCCACCTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS GCA 72 bp CGTCGAGAGCCACCATGTCGGCCGAGCGCTCGCGGCTaGTGCTGCACGGGCACTCCTGCCACTCGTCGCGCC +
Preference number: 6 (lower is better)
Translates to: RREPPCRPSARG*CCTGTPATRRA
Trigger: GGCGCGACGAGTGGCAGGAGTGCCCGTGCAGCAGCAGCCGCGAGCGCTCGGCCGACATGGTGGCTCTCGACG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS GCA 72 bp CCGGGGAGGCGCAGGGGCGCGACGCACGGGCTCCACTaGTTGGCCAGGCAGTGGTATCGGGACACGCTGACC +
Preference number: 6 (lower is better)
Translates to: PGRRRGATHGLH*LARQWYRDTLT
Trigger: GGTCAGCGTGTCCCGATACCACTGCCTGGCCAAGCAGTGGAGCCCGTGCGTCGCGCCCCTGCGCCTCCCCGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS CCA 72 bp GCGCCCGCGCGCCCCCGGTTCCGCAGCCTGCAGGTCTaGCCAAGGTCGAGCCTTACTCCGGGGTTTCCAGCC +
Preference number: 6 (lower is better)
Translates to: APARPRFRSLQV*PRSSLTPGFPA
Trigger: GGCTGGAAACCCCGGAGTAAGGCTCGACCTTGGCCAGACCTGCAGGCTGCGGAACCGGGGGCGCGCGGGCGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS CCA 72 bp GCTGCCGCTTGGCCGCGCTCAGGACCTCGTAGCAGTTaGCCAGGCTCAGCTGCGGCCCCACGGCGTCGGTGG +
Preference number: 6 (lower is better)
Translates to: AAAWPRSGPRSS*PGSAAAPRRRW
Trigger: CCACCGACGCCGTGGGGCCGCAGCTGAGCCTGGCCAACTGCTACGAGGTCCTGAGCGCGGCCAAGCGGCAGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS CAA 72 bp GGGAGGCGCAGGGGCGCGACGCACGGGCTCCACTGCTaGGCCAGGCAGTGGTATCGGGACACGCTGACCCCG +
Preference number: 6 (lower is better)
Translates to: GRRRGATHGLHC*ARQWYRDTLTP
Trigger: CGGGGTCAGCGTGTCCCGATACCACTGCCTGGCCAAGCAGTGGAGCCCGTGCGTCGCGCCCCTGCGCCTCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS GCA 72 bp GCCGAGCGCTCGCGGCTGCTGCTGCACGGGCACTCCTaGCACTCGTCGCGCCGCGGGTCATACTTGAGCAGG +
Preference number: 6 (lower is better)
Translates to: AERSRLLLHGHS*HSSRRGSYLSR
Trigger: CCTGCTCAAGTATGACCCGCGGCGCGACGAGTGGCAGGAGTGCCCGTGCAGCAGCAGCCGCGAGCGCTCGGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS CCA 72 bp AGGCGGCGTCGCGCAGCTCGTTCAGCCGCTGCCGCTTaGCCGCGCTCAGGACCTCGTAGCAGTTGGCCAGGC +
Preference number: 6 (lower is better)
Translates to: RRRRAARSAAAA*PRSGPRSSWPG
Trigger: GCCTGGCCAACTGCTACGAGGTCCTGAGCGCGGCCAAGCGGCAGCGGCTGAACGAGCTGCGCGACGCCGCCT
72% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS TCA 72 bp AGGCGAGGGACTGCGGCGGGGACTCTTCCCCGGAGCTaGAGCACAGGGACGCGCCGAGACTGCAGGGTGTCT +
Preference number: 6 (lower is better)
Translates to: RRGTAAGTLPRS*STGTRRDCRVS
Trigger: AGACACCCTGCAGTCTCGGCGCGTCCCTGTGCTTCAGCTCCGGGGAAGAGTCCCCGCCGCAGTCCCTCGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS TCA 72 bp CCTCGCCGCGGCTGCCGCTCAGATCGAAGCGGTAGATaGAGCCGTCGAGAGCCACCATGTCGGCCGAGCGCT +
Preference number: 6 (lower is better)
Translates to: PRRGCRSDRSGR*SRREPPCRPSA
Trigger: AGCGCTCGGCCGACATGGTGGCTCTCGACGGCTTCATCTACCGCTTCGATCTGAGCGGCAGCCGCGGCGAGG
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS TCA 72 bp GGCACTCCTGCCACTCGTCGCGCCGCGGGTCATACTTaGGCAGGCGATAGAAGAGGGAGCCCCCGGACACGT +
Preference number: 6 (lower is better)
Translates to: GTPATRRAAGHT*AGDRRGSPRTR
Trigger: ACGTGTCCGGGGGCTCCCTCTTCTATCGCCTGCTCAAGTATGACCCGCGGCGCGACGAGTGGCAGGAGTGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS CCA 72 bp TGTGGCTACACAACTGCAAGGTCACGGGGAGGACACTaGTCCTGTGTGCTGGTCTCAGGAGCTCTCCCCGTG +
Preference number: 6 (lower is better)
Translates to: CGYTTARSRGGH*SCVLVSGALPV
Trigger: CACGGGGAGAGCTCCTGAGACCAGCACACAGGACCAGTGTCCTCCCCGTGACCTTGCAGTTGTGTAGCCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS CAA 90 bp GGCTGTCCTCGCTCACGGGGCAGGACCCTTCCTCTGCAGCTTCCTTaGCTGGGATATCAGGTGTTTCCGCGTCCTCTCACCACACTCTTG +
Preference number: 6 (lower is better)
Translates to: GCPRSRGRTLPLQLP*LGYQVFPRPLTTLL
Trigger: CAAGAGTGTGGTGAGAGGACGCGGAAACACCTGATATCCCAGCAAAGGAAGCTGCAGAGGAAGGGTCCTGCCCCGTGAGCGAGGACAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS CAA 90 bp CGCTGGCTGACTAGGTGTCTCTCTGCAGTACCAGATAACCAGGTATaGGGTGCGCCCTCGCTCTCAGGAGTCCGTGCTCACCCACTCACT +
Preference number: 6 (lower is better)
Translates to: RWLTRCLSAVPDNQV*GAPSLSGVRAHPLT
Trigger: AGTGAGTGGGTGAGCACGGACTCCTGAGAGCGAGGGCGCACCCAATACCTGGTTATCTGGTACTGCAGAGAGACACCTAGTCAGCCAGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS GCA 72 bp CCAGGTATTGGGTGCGCCCTCGCTCTCAGGAGTCCGTaGTCACCCACTCACTTCACATGCTGTCATATCACC +
Preference number: 6 (lower is better)
Translates to: PGIGCALALRSP*SPTHFTCCHIT
Trigger: GGTGATATGACAGCATGTGAAGTGAGTGGGTGAGCACGGACTCCTGAGAGCGAGGGCGCACCCAATACCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS CCA 72 bp CTAGGTGTCTCTCTGCAGTACCAGATAACCAGGTATTaGGTGCGCCCTCGCTCTCAGGAGTCCGTGCTCACC +
Preference number: 6 (lower is better)
Translates to: LGVSLQYQITRY*VRPRSQESVLT
Trigger: GGTGAGCACGGACTCCTGAGAGCGAGGGCGCACCCAATACCTGGTTATCTGGTACTGCAGAGAGACACCTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS TCA 72 bp ACCCCAGCCACTTTAAATCTGCCCAGAAAGTCTTGGTaGATGGATCTCCAGCTGGCGCCAGGACCGCGTCAG +
Preference number: 6 (lower is better)
Translates to: TPATLNLPRKSW*MDLQLAPGPRQ
Trigger: CTGACGCGGTCCTGGCGCCAGCTGGAGATCCATTCACCAAGACTTTCTGGGCAGATTTAAAGTGGCTGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS CCA 72 bp ATCTGCCCAGAAAGTCTTGGTGAATGGATCTCCAGCTaGCGCCAGGACCGCGTCAGCCAACATCCAGCAATG +
Preference number: 6 (lower is better)
Translates to: ICPESLGEWISS*RQDRVSQHPAM
Trigger: CATTGCTGGATGTTGGCTGACGCGGTCCTGGCGCCAGCTGGAGATCCATTCACCAAGACTTTCTGGGCAGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS CAA 72 bp ACTAGGTGTCTCTCTGCAGTACCAGATAACCAGGTATaGGGTGCGCCCTCGCTCTCAGGAGTCCGTGCTCAC +
Preference number: 6 (lower is better)
Translates to: TRCLSAVPDNQV*GAPSLSGVRAH
Trigger: GTGAGCACGGACTCCTGAGAGCGAGGGCGCACCCAATACCTGGTTATCTGGTACTGCAGAGAGACACCTAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS GCA 72 bp CACACCTCCTCATATACGGGGTCATCCGTAATTCACTaGCAGGGGGATGTTAGGAGAAGCCGCTGTGCTCCT +
Preference number: 6 (lower is better)
Translates to: HTSSYTGSSVIH*QGDVRRSRCAP
Trigger: AGGAGCACAGCGGCTTCTCCTAACATCCCCCTGGCAGTGAATTACGGATGACCCCGTATATGAGGAGGTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS GCA 72 bp AGCCAACATCCAGCAATGACTGGAGCTGCAGTTGACTaGGGTTGTTTCTGCAGCCTGGGTGACCAGGTGTCT +
Preference number: 6 (lower is better)
Translates to: SQHPAMTGAAVD*GCFCSLGDQVS
Trigger: AGACACCTGGTCACCCAGGCTGCAGAAACAACCGCAGTCAACTGCAGCTCCAGTCATTGCTGGATGTTGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS CCA 72 bp GCCTTACTCCGGGGTTTCCAGCCTCACAGCTTTTCCTaGCACGCGATCAGATTTCACTTCTGTGTGTCCACG +
Preference number: 6 (lower is better)
Translates to: ALLRGFQPHSFS*HAIRFHFCVST
Trigger: CGTGGACACACAGAAGTGAAATCTGATCGCGTGCCAGGAAAAGCTGTGAGGCTGGAAACCCCGGAGTAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2
CDS CCA 72 bp CTTGAAAAGAGTCCCCTTATGGGCTCTCCTTCTCTGTaGCTCCCACTTGTGGCTACACAACTGCAAGGTCAC +
Preference number: 6 (lower is better)
Translates to: LEKSPLMGSPSL*LPLVATQLQGH
Trigger: GTGACCTTGCAGTTGTGTAGCCACAAGTGGGAGCCACAGAGAAGGAGAGCCCATAAGGGGACTCTTTTCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320248.4
ENST00000617214.2