RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KAZALD1 (Homo sapiens)

Ensembl gene IDs: ENSG00000107821

Ensembl transcript IDs: ENST00000370200.6, ENST00000465807.1, ENST00000470106.1, ENST00000477267.1, ENST00000477979.5

Found 256 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCGCCCTGGAATCGGCTCCCGGTATCCAGCCCGCTTGCGCTGTTGTaGGCGGCTCCTAGGGCCGCCCGCTTCCAGCCTGGGTTCGGCAAT +
Preference number: 1 (lower is better)
Translates to: APWNRLPVSSPLALL*AAPRAARFQPGFGN
Trigger: ATTGCCGAACCCAGGCTGGAAGCGGGCGGCCCTAGGAGCCGCGCACAACAGCGCAAGCGGGCTGGATACCGGGAGCCGATTCCAGGGCGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370200.6
3UTR CCA 90 bp AAGGGCAGGCCCTCCCGCAGTGGCGCCAGGATCCGGGTGGAGCCCTaGCGTGTAGGAGGCTGTCGCCATCTACACACAGCGCCTCGGCCT +
Preference number: 1 (lower is better)
Translates to: KGRPSRSGARIRVEP*RVGGCRHLHTAPRP
Trigger: AGGCCGAGGCGCTGTGTGTAGATGGCGACAGCCTCCTACACGCCAGGGCTCCACCCGGATCCTGGCGCCACTGCGGGAGGGCCTGCCCTT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370200.6
3UTR TCA 90 bp GGAGCCCAGCTGGGCGAAGAACAAGCTAGGGGCGGATTCCCTGGCTaGTGCTGGGACTCACACCCACGTCCCCTCTTTCAGCGCCGGGCG +
Preference number: 1 (lower is better)
Translates to: GAQLGEEQARGGFPG*CWDSHPRPLFQRRA
Trigger: CGCCCGGCGCTGAAAGAGGGGACGTGGGTGTGAGTCCCAGCATCAGCCAGGGAATCCGCCCCTAGCTTGTTCTTCGCCCAGCTGGGCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370200.6
3UTR CCA 90 bp CGCGGTAGGAGCTATGGGCCCGCAGAGGGCGTCTTGGAGCCCAGCTaGGCGAAGAACAAGCTAGGGGCGGATTCCCTGGCTGATGCTGGG +
Preference number: 1 (lower is better)
Translates to: RGRSYGPAEGVLEPS*AKNKLGADSLADAG
Trigger: CCCAGCATCAGCCAGGGAATCCGCCCCTAGCTTGTTCTTCGCCCAGCTGGGCTCCAAGACGCCCTCTGCGGGCCCATAGCTCCTACCGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370200.6
3UTR GCA 90 bp GGGTTGGAGTTCCGGACCACACCCCTCCCATGTGGCCAGGCTCCCTaGGTTGGGCCCCAGAGGACAAACTCTGACGCTGAGCCAAGGGCA +
Preference number: 1 (lower is better)
Translates to: GLEFRTTPLPCGQAP*VGPQRTNSDAEPRA
Trigger: TGCCCTTGGCTCAGCGTCAGAGTTTGTCCTCTGGGGCCCAACGCAGGGAGCCTGGCCACATGGGAGGGGTGTGGTCCGGAACTCCAACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370200.6
3UTR GCA 90 bp AGGGCTGGAAGAAGTGGAGAATCCTGGTGCCTGCACCTCTGTGTCTaGTCAGGCCCCCACCCCAGCCTGGGAAACAACCTGTTGGAGGTC +
Preference number: 1 (lower is better)
Translates to: RAGRSGESWCLHLCV*SGPHPSLGNNLLEV
Trigger: GACCTCCAACAGGTTGTTTCCCAGGCTGGGGTGGGGGCCTGAGCAGACACAGAGGTGCAGGCACCAGGATTCTCCACTTCTTCCAGCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370200.6
3UTR CCA 90 bp GGAGGAAGGGCAGTTAGAACTGTGGCCCAGCAGGGCTGGAAGAAGTaGAGAATCCTGGTGCCTGCACCTCTGTGTCTGCTCAGGCCCCCA +
Preference number: 1 (lower is better)
Translates to: GGRAVRTVAQQGWKK*RILVPAPLCLLRPP
Trigger: TGGGGGCCTGAGCAGACACAGAGGTGCAGGCACCAGGATTCTCCACTTCTTCCAGCCCTGCTGGGCCACAGTTCTAACTGCCCTTCCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370200.6
3UTR CCA 90 bp AGGGCCGCCCGCTTCCAGCCTGGGTTCGGCAATAAAAACTGTCGCTaGCTTAAGGACCCGGGGCAAGCCAGCAGTAGATGGAGTAGTGCG +
Preference number: 1 (lower is better)
Translates to: RAARFQPGFGNKNCR*LKDPGQASSRWSSA
Trigger: CGCACTACTCCATCTACTGCTGGCTTGCCCCGGGTCCTTAAGCCAGCGACAGTTTTTATTGCCGAACCCAGGCTGGAAGCGGGCGGCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370200.6
3UTR CCA 90 bp CATGACTCTGGCTTCTGCAGGAAATGGGTAGATTCCTATGGGAGCTaGGGAAGGGTATGGACCACACAGGTGACCAAACTTCCACCCTCC +
Preference number: 1 (lower is better)
Translates to: HDSGFCRKWVDSYGS*GRVWTTQVTKLPPS
Trigger: GGAGGGTGGAAGTTTGGTCACCTGTGTGGTCCATACCCTTCCCCAGCTCCCATAGGAATCTACCCATTTCCTGCAGAAGCCAGAGTCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370200.6
3UTR CCA 90 bp AGAGAGCAGGCCCTGCAGCTTCTGGAAGCCAGAGTTCTGTTAGTGTaGGAGGCCTCCCAGGGATATTCAGTTTTCATGTGCACATCTGCA +
Preference number: 1 (lower is better)
Translates to: REQALQLLEARVLLV*EASQGYSVFMCTSA
Trigger: TGCAGATGTGCACATGAAAACTGAATATCCCTGGGAGGCCTCCCACACTAACAGAACTCTGGCTTCCAGAAGCTGCAGGGCCTGCTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370200.6
3UTR GCA 90 bp ACAATTGGGGCAGATAGGAAACAGCCTTACCATGACTCTGGCTTCTaGAGGAAATGGGTAGATTCCTATGGGAGCTGGGGAAGGGTATGG +
Preference number: 1 (lower is better)
Translates to: TIGADRKQPYHDSGF*RKWVDSYGSWGRVW
Trigger: CCATACCCTTCCCCAGCTCCCATAGGAATCTACCCATTTCCTGCAGAAGCCAGAGTCATGGTAAGGCTGTTTCCTATCTGCCCCAATTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370200.6
3UTR CCA 90 bp TTCTGCAGGAAATGGGTAGATTCCTATGGGAGCTGGGGAAGGGTATaGACCACACAGGTGACCAAACTTCCACCCTCCTCTATCCAGTTT +
Preference number: 1 (lower is better)
Translates to: FCRKWVDSYGSWGRV*TTQVTKLPPSSIQF
Trigger: AAACTGGATAGAGGAGGGTGGAAGTTTGGTCACCTGTGTGGTCCATACCCTTCCCCAGCTCCCATAGGAATCTACCCATTTCCTGCAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370200.6
3UTR CCA 90 bp TGGAATAAGATGAGCAAAGAAGCAGATAATGTATATCAGCCCCAATaGAGGGCAGACGGGGAAGATAACTTCCCTCCAGCCATATGGCTC +
Preference number: 1 (lower is better)
Translates to: WNKMSKEADNVYQPQ*RADGEDNFPPAIWL
Trigger: GAGCCATATGGCTGGAGGGAAGTTATCTTCCCCGTCTGCCCTCCATTGGGGCTGATATACATTATCTGCTTCTTTGCTCATCTTATTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370200.6
3UTR GCA 90 bp AATACAGAGTGGTATAAGATCTCGAGCTGGCCTCACCTATCTCTCTaGACTGAACTAAGTCATGCTCCGCTGTTCTCTCTCTTGTACAAA +
Preference number: 1 (lower is better)
Translates to: NTEWYKISSWPHLSL*TELSHAPLFSLLYK
Trigger: TTTGTACAAGAGAGAGAACAGCGGAGCATGACTTAGTTCAGTGCAGAGAGATAGGTGAGGCCAGCTCGAGATCTTATACCACTCTGTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370200.6
3UTR GCA 90 bp AGTGTGGGAGGCCTCCCAGGGATATTCAGTTTTCATGTGCACATCTaGATAAACTGTCTGTGCATCATTAGAAATCTTTATTGGTGCCTA +
Preference number: 1 (lower is better)
Translates to: SVGGLPGIFSFHVHI*INCLCIIRNLYWCL
Trigger: TAGGCACCAATAAAGATTTCTAATGATGCACAGACAGTTTATGCAGATGTGCACATGAAAACTGAATATCCCTGGGAGGCCTCCCACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370200.6
3UTR CAA 90 bp TGGGCGCCCTGGAATCGGCTCCCGGTATCCAGCCCGCTTGCGCTGTaGTGCGCGGCTCCTAGGGCCGCCCGCTTCCAGCCTGGGTTCGGC +
Preference number: 2 (lower is better)
Translates to: WAPWNRLPVSSPLAL*CAAPRAARFQPGFG
Trigger: GCCGAACCCAGGCTGGAAGCGGGCGGCCCTAGGAGCCGCGCACAACAGCGCAAGCGGGCTGGATACCGGGAGCCGATTCCAGGGCGCCCA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370200.6
3UTR CAA 90 bp TGCTTCTGTGGGCGCCCTGGAATCGGCTCCCGGTATCCAGCCCGCTaGCGCTGTTGTGCGCGGCTCCTAGGGCCGCCCGCTTCCAGCCTG +
Preference number: 2 (lower is better)
Translates to: CFCGRPGIGSRYPAR*RCCARLLGPPASSL
Trigger: CAGGCTGGAAGCGGGCGGCCCTAGGAGCCGCGCACAACAGCGCAAGCGGGCTGGATACCGGGAGCCGATTCCAGGGCGCCCACAGAAGCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370200.6
3UTR-3UTR CCA 90 bp CCGCTTGCGCTGTTGTGCGCGGCTCCTAGGGCCGCCCGCTTCCAGCCTGGGTTCATCCGGGTGGAGCCCTaGCGTGTAGGAGGCTGTCGC +
Preference number: 2 (lower is better)
Translates to: PLALLCAAPRAARFQPGFIRVEP*RVGGCR
Trigger: GCGACAGCCTCCTACACGCCAGGGCTCCACCCGGAT...GAACCCAGGCTGGAAGCGGGCGGCCCTAGGAGCCGCGCACAACAGCGCAAGCGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370200.6
3UTR CAA 90 bp TGGAGTTCCGGACCACACCCCTCCCATGTGGCCAGGCTCCCTGCGTaGGGCCCCAGAGGACAAACTCTGACGCTGAGCCAAGGGCAGGCC +
Preference number: 2 (lower is better)
Translates to: WSSGPHPSHVARLPA*GPRGQTLTLSQGQA
Trigger: GGCCTGCCCTTGGCTCAGCGTCAGAGTTTGTCCTCTGGGGCCCAACGCAGGGAGCCTGGCCACATGGGAGGGGTGTGGTCCGGAACTCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370200.6
3UTR-3UTR CCA 90 bp CGGCCAAGCAGGACCTGGGGTTGGAGTTCCGGACCACACCCCTCCCATGTGGCCGCCCCCACCCCAGCCTaGGAAACAACCTGTTGGAGG +
Preference number: 2 (lower is better)
Translates to: RPSRTWGWSSGPHPSHVAAPTPA*ETTCWR
Trigger: CCTCCAACAGGTTGTTTCCCAGGCTGGGGTGGGGGC...GGCCACATGGGAGGGGTGTGGTCCGGAACTCCAACCCCAGGTCCTGCTTGGCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000370200.6
3UTR-3UTR CCA 90 bp CAGGTGGACGCGGTAGGAGCTATGGGCCCGCAGAGGGCGTCTTGGAGCCCAGCTCGGCCAAGCAGGACCTaGGGTTGGAGTTCCGGACCA +
Preference number: 2 (lower is better)
Translates to: QVDAVGAMGPQRASWSPARPSRT*GWSSGP
Trigger: TGGTCCGGAACTCCAACCCCAGGTCCTGCTTGGCCG...AGCTGGGCTCCAAGACGCCCTCTGCGGGCCCATAGCTCCTACCGCGTCCACCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370200.6
3UTR CAA 90 bp TCTGCAGGTGGACGCGGTAGGAGCTATGGGCCCGCAGAGGGCGTCTaGGAGCCCAGCTGGGCGAAGAACAAGCTAGGGGCGGATTCCCTG +
Preference number: 2 (lower is better)
Translates to: SAGGRGRSYGPAEGV*EPSWAKNKLGADSL
Trigger: CAGGGAATCCGCCCCTAGCTTGTTCTTCGCCCAGCTGGGCTCCAAGACGCCCTCTGCGGGCCCATAGCTCCTACCGCGTCCACCTGCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370200.6
3UTR-3UTR GCA 90 bp CCCTCTTTCAGCGCCGGGCGGATTTTGGCCACAGCGCCGAACAGCACGCCCCACCATCTGGCAGGCATGTaGTTAGAGAGCAGGCCCTGC +
Preference number: 2 (lower is better)
Translates to: PSFSAGRILATAPNSTPHHLAGM*LESRPC
Trigger: GCAGGGCCTGCTCTCTAAGCACATGCCTGCCAGATG...GTGGGGCGTGCTGTTCGGCGCTGTGGCCAAAATCCGCCCGGCGCTGAAAGAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370200.6
3UTR-3UTR TCA 90 bp CCGCTTGCGCTGTTGTGCGCGGCTCCTAGGGCCGCCCGCTTCCAGCCTGGGTTCTCCCTACTGACAGCATaGAAGCAGTCGATGAAGGGA +
Preference number: 2 (lower is better)
Translates to: PLALLCAAPRAARFQPGFSLLTA*KQSMKG
Trigger: TCCCTTCATCGACTGCTTTCATGCTGTCAGTAGGGA...GAACCCAGGCTGGAAGCGGGCGGCCCTAGGAGCCGCGCACAACAGCGCAAGCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370200.6
3UTR-3UTR CCA 90 bp CAGGTGGACGCGGTAGGAGCTATGGGCCCGCAGAGGGCGTCTTGGAGCCCAGCTTGGGAAACAACCTGTTaGAGGTCCTACTGGCCAGGG +
Preference number: 2 (lower is better)
Translates to: QVDAVGAMGPQRASWSPAWETTC*RSYWPG
Trigger: CCCTGGCCAGTAGGACCTCCAACAGGTTGTTTCCCA...AGCTGGGCTCCAAGACGCCCTCTGCGGGCCCATAGCTCCTACCGCGTCCACCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370200.6
3UTR-3UTR CCA 90 bp CCCTCTTTCAGCGCCGGGCGGATTTTGGCCACAGCGCCGAACAGCACGCCCCACCAGGGCTGGAAGAAGTaGAGAATCCTGGTGCCTGCA +
Preference number: 2 (lower is better)
Translates to: PSFSAGRILATAPNSTPHQGWKK*RILVPA
Trigger: TGCAGGCACCAGGATTCTCCACTTCTTCCAGCCCTG...GTGGGGCGTGCTGTTCGGCGCTGTGGCCAAAATCCGCCCGGCGCTGAAAGAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370200.6
3UTR-3UTR CCA 90 bp CAGGTGGACGCGGTAGGAGCTATGGGCCCGCAGAGGGCGTCTTGGAGCCCAGCTGCAAGAACCAGGGCCTaGGAGGAAGGGCAGTTAGAA +
Preference number: 2 (lower is better)
Translates to: QVDAVGAMGPQRASWSPAARTRA*EEGQLE
Trigger: TTCTAACTGCCCTTCCTCCCAGGCCCTGGTTCTTGC...AGCTGGGCTCCAAGACGCCCTCTGCGGGCCCATAGCTCCTACCGCGTCCACCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370200.6
3UTR-3UTR CCA 90 bp TGGGCGAAGAACAAGCTAGGGGCGGATTCCCTGGCTGATGCTGGGACTCACACCCCAGGCTCCCTGCGTTaGGCCCCAGAGGACAAACTC +
Preference number: 2 (lower is better)
Translates to: WAKNKLGADSLADAGTHTPGSLR*APEDKL
Trigger: GAGTTTGTCCTCTGGGGCCCAACGCAGGGAGCCTGG...GGTGTGAGTCCCAGCATCAGCCAGGGAATCCGCCCCTAGCTTGTTCTTCGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370200.6
3UTR-3UTR TCA 90 bp CGGCCAAGCAGGACCTGGGGTTGGAGTTCCGGACCACACCCCTCCCATGTGGCCCCTATCTCTCTGCACTaGACTAAGTCATGCTCCGCT +
Preference number: 2 (lower is better)
Translates to: RPSRTWGWSSGPHPSHVAPISLH*TKSCSA
Trigger: AGCGGAGCATGACTTAGTTCAGTGCAGAGAGATAGG...GGCCACATGGGAGGGGTGTGGTCCGGAACTCCAACCCCAGGTCCTGCTTGGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370200.6
3UTR-3UTR TCA 90 bp CGCTGTTGTGCGCGGCTCCTAGGGCCGCCCGCTTCCAGCCTGGGTTCGGCAATAGAAACAGCCTTACCATaGCTCTGGCTTCTGCAGGAA +
Preference number: 2 (lower is better)
Translates to: RCCARLLGPPASSLGSAIETALP*LWLLQE
Trigger: TTCCTGCAGAAGCCAGAGTCATGGTAAGGCTGTTTC...TATTGCCGAACCCAGGCTGGAAGCGGGCGGCCCTAGGAGCCGCGCACAACAGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370200.6
3UTR-3UTR GCA 90 bp CCCTCTTTCAGCGCCGGGCGGATTTTGGCCACAGCGCCGAACAGCACGCCCCACGGCCTCGCTGACTTATaGTTTCATTCTTTCCTCCAA +
Preference number: 2 (lower is better)
Translates to: PSFSAGRILATAPNSTPHGLADL*FHSFLQ
Trigger: TTGGAGGAAAGAATGAAAGCATAAGTCAGCGAGGCC...GTGGGGCGTGCTGTTCGGCGCTGTGGCCAAAATCCGCCCGGCGCTGAAAGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370200.6
3UTR-3UTR TCA 90 bp AGGGCCGCCCGCTTCCAGCCTGGGTTCGGCAATAAAAACTGTCGCTGGCTTAAGCATGAAAGCAGTCGATaGAGGGACCCTGCTCCCCTT +
Preference number: 2 (lower is better)
Translates to: RAARFQPGFGNKNCRWLKHESSR*RDPAPL
Trigger: AAGGGGAGCAGGGTCCCTTCATCGACTGCTTTCATG...CTTAAGCCAGCGACAGTTTTTATTGCCGAACCCAGGCTGGAAGCGGGCGGCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370200.6
3UTR-3UTR GCA 90 bp CAGGTGGACGCGGTAGGAGCTATGGGCCCGCAGAGGGCGTCTTGGAGCCCAGCTCCTCTATCCAGTTTATaGTTTCATTTTGGGGGCCAA +
Preference number: 2 (lower is better)
Translates to: QVDAVGAMGPQRASWSPAPLSSL*FHFGGQ
Trigger: TTGGCCCCCAAAATGAAAGCATAAACTGGATAGAGG...AGCTGGGCTCCAAGACGCCCTCTGCGGGCCCATAGCTCCTACCGCGTCCACCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370200.6
3UTR-3UTR CCA 90 bp CTGATTCTGCTTCTGTGGGCGCCCTGGAATCGGCTCCCGGTATCCAGCCCGCTTGTTAGTAGGTGCAACTaGGGCTTAGGAGAGAGGGAA +
Preference number: 2 (lower is better)
Translates to: LILLLWAPWNRLPVSSPLVSRCN*GLGERE
Trigger: TTCCCTCTCTCCTAAGCCCCAGTTGCACCTACTAAC...AAGCGGGCTGGATACCGGGAGCCGATTCCAGGGCGCCCACAGAAGCAGAATCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370200.6
3UTR-3UTR CCA 90 bp CTGATTCTGCTTCTGTGGGCGCCCTGGAATCGGCTCCCGGTATCCAGCCCGCTTATGGGTAGATTCCTATaGGAGCTGGGGAAGGGTATG +
Preference number: 2 (lower is better)
Translates to: LILLLWAPWNRLPVSSPLMGRFL*ELGKGM
Trigger: CATACCCTTCCCCAGCTCCCATAGGAATCTACCCAT...AAGCGGGCTGGATACCGGGAGCCGATTCCAGGGCGCCCACAGAAGCAGAATCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370200.6
3UTR-3UTR CCA 90 bp CTGATTCTGCTTCTGTGGGCGCCCTGGAATCGGCTCCCGGTATCCAGCCCGCTTTATAAGATCTCGAGCTaGCCTCACCTATCTCTCTGC +
Preference number: 2 (lower is better)
Translates to: LILLLWAPWNRLPVSSPLYKISS*PHLSLC
Trigger: GCAGAGAGATAGGTGAGGCCAGCTCGAGATCTTATA...AAGCGGGCTGGATACCGGGAGCCGATTCCAGGGCGCCCACAGAAGCAGAATCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370200.6
3UTR-3UTR CCA 90 bp TCTGGCTTCTGCAGGAAATGGGTAGATTCCTATGGGAGCTGGGGAAGGGTATGGCCCTGTTCCCCATTCTaGCCTGGGGAAGGGTTTGGA +
Preference number: 2 (lower is better)
Translates to: SGFCRKWVDSYGSWGRVWPCSPF*PGEGFG
Trigger: TCCAAACCCTTCCCCAGGCCAGAATGGGGAACAGGG...CCATACCCTTCCCCAGCTCCCATAGGAATCTACCCATTTCCTGCAGAAGCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370200.6
3UTR-3UTR CCA 90 bp TCCAGCCTGGGTTCGGCAATAAAAACTGTCGCTGGCTTAAGGACCCGGGGCAAGGATTCCTATGGGAGCTaGGGAAGGGTATGGACCACA +
Preference number: 2 (lower is better)
Translates to: SSLGSAIKTVAGLRTRGKDSYGS*GRVWTT
Trigger: TGTGGTCCATACCCTTCCCCAGCTCCCATAGGAATC...CTTGCCCCGGGTCCTTAAGCCAGCGACAGTTTTTATTGCCGAACCCAGGCTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370200.6
3UTR CAA 90 bp GGTGACCAAACTTCCACCCTCCTCTATCCAGTTTATGCTTTCATTTaGGGGGCCAACCCACATAGCCCTGTTCCCCATTCTGGCCTGGGG +
Preference number: 2 (lower is better)
Translates to: GDQTSTLLYPVYAFI*GANPHSPVPHSGLG
Trigger: CCCCAGGCCAGAATGGGGAACAGGGCTATGTGGGTTGGCCCCCAAAATGAAAGCATAAACTGGATAGAGGAGGGTGGAAGTTTGGTCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370200.6
3UTR-3UTR TCA 90 bp CTGATTCTGCTTCTGTGGGCGCCCTGGAATCGGCTCCCGGTATCCAGCCCGCTTAAAAGTTCTGGAAGATaGGTTTGGGGAAAGGGCAAA +
Preference number: 2 (lower is better)
Translates to: LILLLWAPWNRLPVSSPLKSSGR*VWGKGK
Trigger: TTTGCCCTTTCCCCAAACTCATCTTCCAGAACTTTT...AAGCGGGCTGGATACCGGGAGCCGATTCCAGGGCGCCCACAGAAGCAGAATCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370200.6
3UTR-3UTR CCA 90 bp CTCTATCCAGTTTATGCTTTCATTTTGGGGGCCAACCCACATAGCCCTGTTCCCAGGGCATCTCCTGCATaGGCCCCTTTGTACCCCACC +
Preference number: 2 (lower is better)
Translates to: LYPVYAFILGANPHSPVPRASPA*APLYPT
Trigger: GGTGGGGTACAAAGGGGCCCATGCAGGAGATGCCCT...GGGAACAGGGCTATGTGGGTTGGCCCCCAAAATGAAAGCATAAACTGGATAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000370200.6
3UTR-3UTR CCA 90 bp GGGAGGGGGCGGTGGACAACAGTTCTCCCATTCCAGGCTGTGGTGCTTGAACCAGCCTGGGGAAGGGTTTaGAATAAGATGAGCAAAGAA +
Preference number: 2 (lower is better)
Translates to: GRGRWTTVLPFQAVVLEPAWGRV*NKMSKE
Trigger: TTCTTTGCTCATCTTATTCCAAACCCTTCCCCAGGC...TGGTTCAAGCACCACAGCCTGGAATGGGAGAACTGTTGTCCACCGCCCCCTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370200.6
3UTR-3UTR TCA 90 bp CTCCTAGGGCCGCCCGCTTCCAGCCTGGGTTCGGCAATAAAAACTGTCGCTGGCGGGTTTGGAATAAGATaGGCAAAGAAGCAGATAATG +
Preference number: 2 (lower is better)
Translates to: LLGPPASSLGSAIKTVAGGFGIR*AKKQIM
Trigger: CATTATCTGCTTCTTTGCTCATCTTATTCCAAACCC...GCCAGCGACAGTTTTTATTGCCGAACCCAGGCTGGAAGCGGGCGGCCCTAGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370200.6
3UTR-3UTR CCA 90 bp AGGGCCGCCCGCTTCCAGCCTGGGTTCGGCAATAAAAACTGTCGCTGGCTTAAGTTTATGCTTTCATTTTaGGGGCCAACCCACATAGCC +
Preference number: 2 (lower is better)
Translates to: RAARFQPGFGNKNCRWLKFMLSF*GPTHIA
Trigger: GGCTATGTGGGTTGGCCCCCAAAATGAAAGCATAAA...CTTAAGCCAGCGACAGTTTTTATTGCCGAACCCAGGCTGGAAGCGGGCGGCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370200.6
3UTR-3UTR TCA 90 bp CCAAGCCAGAGAGGACAGGTCACAATTGGGGCAGATAGGAAACAGCCTTACCATTATGGACCACACAGGTaGCCAAACTTCCACCCTCCT +
Preference number: 2 (lower is better)
Translates to: PSQRGQVTIGADRKQPYHYGPHR*PNFHPP
Trigger: AGGAGGGTGGAAGTTTGGTCACCTGTGTGGTCCATA...ATGGTAAGGCTGTTTCCTATCTGCCCCAATTGTGACCTGTCCTCTCTGGCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370200.6
3UTR-3UTR GCA 90 bp CTGCGCCCGCATTACTTTAATAATAAATCGCGTGTCACTTTCCAGCGACATTATCTGCACCTCTGTGTCTaGTCAGGCCCCCACCCCAGC +
Preference number: 2 (lower is better)
Translates to: LRPHYFNNKSRVTFQRHYLHLCV*SGPHPS
Trigger: GCTGGGGTGGGGGCCTGAGCAGACACAGAGGTGCAG...ATAATGTCGCTGGAAAGTGACACGCGATTTATTATTAAAGTAATGCGGGCGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370200.6
3UTR-3UTR CCA 90 bp AAGCAGATAATGTATATCAGCCCCAATGGAGGGCAGACGGGGAAGATAACTTCCGGGCAGTTAGAACTGTaGCCCAGCAGGGCTGGAAGA +
Preference number: 2 (lower is better)
Translates to: KQIMYISPNGGQTGKITSGQLEL*PSRAGR
Trigger: TCTTCCAGCCCTGCTGGGCCACAGTTCTAACTGCCC...GGAAGTTATCTTCCCCGTCTGCCCTCCATTGGGGCTGATATACATTATCTGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370200.6
3UTR CAA 90 bp CCTACCCTCCTCCAGCTTTTGTCTCTATCCTACCACACTGCTACCTaGGAGTCAAATAGGCCTCCCATGATCATCCCTACTGACAGCATG +
Preference number: 2 (lower is better)
Translates to: PTLLQLLSLSYHTAT*ESNRPPMIIPTDSM
Trigger: CATGCTGTCAGTAGGGATGATCATGGGAGGCCTATTTGACTCCAAGGTAGCAGTGTGGTAGGATAGAGACAAAAGCTGGAGGAGGGTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370200.6
3UTR-3UTR CCA 90 bp CCAAGCCAGAGAGGACAGGTCACAATTGGGGCAGATAGGAAACAGCCTTACCATACCACACTGCTACCTTaGAGTCAAATAGGCCTCCCA +
Preference number: 2 (lower is better)
Translates to: PSQRGQVTIGADRKQPYHTTLLP*SQIGLP
Trigger: TGGGAGGCCTATTTGACTCCAAGGTAGCAGTGTGGT...ATGGTAAGGCTGTTTCCTATCTGCCCCAATTGTGACCTGTCCTCTCTGGCTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370200.6
3UTR-3UTR CCA 90 bp AATACAGAGTGGTATAAGATCTCGAGCTGGCCTCACCTATCTCTCTGCACTGAAGTACCCCACCGGTCCTaGTCTCAGCTTCTCTCCCTA +
Preference number: 2 (lower is better)
Translates to: NTEWYKISSWPHLSLCTEVPHRS*SQLLSL
Trigger: TAGGGAGAGAAGCTGAGACCAGGACCGGTGGGGTAC...TTCAGTGCAGAGAGATAGGTGAGGCCAGCTCGAGATCTTATACCACTCTGTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370200.6
3UTR-3UTR CCA 90 bp AACAAGCTAGATAAACGTTGGGGACCAGGAAATAGCAAGAACCAGGGCCTGGGAAGAAGTGGAGAATCCTaGTGCCTGCACCTCTGTGTC +
Preference number: 2 (lower is better)
Translates to: NKLDKRWGPGNSKNQGLGRSGES*CLHLCV
Trigger: GACACAGAGGTGCAGGCACCAGGATTCTCCACTTCT...TCCCAGGCCCTGGTTCTTGCTATTTCCTGGTCCCCAACGTTTATCTAGCTTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370200.6
3UTR-3UTR CCA 90 bp TCCAGCCTGGGTTCGGCAATAAAAACTGTCGCTGGCTTAAGGACCCGGGGCAAGTTGTCCAATACAGAGTaGTATAAGATCTCGAGCTGG +
Preference number: 2 (lower is better)
Translates to: SSLGSAIKTVAGLRTRGKLSNTE*YKISSW
Trigger: CCAGCTCGAGATCTTATACCACTCTGTATTGGACAA...CTTGCCCCGGGTCCTTAAGCCAGCGACAGTTTTTATTGCCGAACCCAGGCTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370200.6
3UTR-3UTR TCA 90 bp CCCTCCTCTATCCAGTTTATGCTTTCATTTTGGGGGCCAACCCACATAGCCCTGCATGATCATCCCTACTaGCAGCATGAAAGCAGTCGA +
Preference number: 2 (lower is better)
Translates to: PSSIQFMLSFWGPTHIALHDHPY*QHESSR
Trigger: TCGACTGCTTTCATGCTGTCAGTAGGGATGATCATG...CAGGGCTATGTGGGTTGGCCCCCAAAATGAAAGCATAAACTGGATAGAGGAGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370200.6
3UTR-3UTR TCA 90 bp AACAAGCTAGATAAACGTTGGGGACCAGGAAATAGCAAGAACCAGGGCCTGGGACAAATAGGCCTCCCATaGTCATCCCTACTGACAGCA +
Preference number: 2 (lower is better)
Translates to: NKLDKRWGPGNSKNQGLGQIGLP*SSLLTA
Trigger: TGCTGTCAGTAGGGATGATCATGGGAGGCCTATTTG...TCCCAGGCCCTGGTTCTTGCTATTTCCTGGTCCCCAACGTTTATCTAGCTTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370200.6
3UTR CAA 90 bp CTATCTCTCTGCACTGAACTAAGTCATGCTCCGCTGTTCTCTCTCTaGTACAAAAGACGGCAGACAGCAAAAGGGACTGCAGTTAGTAGG +
Preference number: 2 (lower is better)
Translates to: LSLCTELSHAPLFSL*YKRRQTAKGTAVSR
Trigger: CCTACTAACTGCAGTCCCTTTTGCTGTCTGCCGTCTTTTGTACAAGAGAGAGAACAGCGGAGCATGACTTAGTTCAGTGCAGAGAGATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370200.6
3UTR-3UTR GCA 90 bp AATACAGAGTGGTATAAGATCTCGAGCTGGCCTCACCTATCTCTCTGCACTGAAACTGCAGTTAGTAGGTaGAACTGGGGCTTAGGAGAG +
Preference number: 2 (lower is better)
Translates to: NTEWYKISSWPHLSLCTETAVSR*NWGLGE
Trigger: CTCTCCTAAGCCCCAGTTGCACCTACTAACTGCAGT...TTCAGTGCAGAGAGATAGGTGAGGCCAGCTCGAGATCTTATACCACTCTGTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370200.6
3UTR-3UTR CCA 90 bp GACAGGTCACAATTGGGGCAGATAGGAAACAGCCTTACCATGACTCTGGCTTCTAAGCTAGATAAACGTTaGGGACCAGGAAATAGCAAG +
Preference number: 2 (lower is better)
Translates to: DRSQLGQIGNSLTMTLASKLDKR*GPGNSK
Trigger: CTTGCTATTTCCTGGTCCCCAACGTTTATCTAGCTT...AGAAGCCAGAGTCATGGTAAGGCTGTTTCCTATCTGCCCCAATTGTGACCTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370200.6
3UTR GCA 72 bp AATCGGCTCCCGGTATCCAGCCCGCTTGCGCTGTTGTaGGCGGCTCCTAGGGCCGCCCGCTTCCAGCCTGGG +
Preference number: 3 (lower is better)
Translates to: NRLPVSSPLALL*AAPRAARFQPG
Trigger: CCCAGGCTGGAAGCGGGCGGCCCTAGGAGCCGCGCACAACAGCGCAAGCGGGCTGGATACCGGGAGCCGATT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370200.6
3UTR-3UTR CAA 90 bp CAGGTGGACGCGGTAGGAGCTATGGGCCCGCAGAGGGCGTCTTGGAGCCCAGCTAGCGCCGGGCGGATTTaGGCCACAGCGCCGAACAGC +
Preference number: 3 (lower is better)
Translates to: QVDAVGAMGPQRASWSPASAGRI*ATAPNS
Trigger: GCTGTTCGGCGCTGTGGCCAAAATCCGCCCGGCGCT...AGCTGGGCTCCAAGACGCCCTCTGCGGGCCCATAGCTCCTACCGCGTCCACCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370200.6
3UTR CCA 72 bp CCCTCCCGCAGTGGCGCCAGGATCCGGGTGGAGCCCTaGCGTGTAGGAGGCTGTCGCCATCTACACACAGCG +
Preference number: 3 (lower is better)
Translates to: PSRSGARIRVEP*RVGGCRHLHTA
Trigger: CGCTGTGTGTAGATGGCGACAGCCTCCTACACGCCAGGGCTCCACCCGGATCCTGGCGCCACTGCGGGAGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370200.6
3UTR CCA 72 bp CCGCCTACCCCTCTGATTCTGCTTCTGTGGGCGCCCTaGAATCGGCTCCCGGTATCCAGCCCGCTTGCGCTG +
Preference number: 3 (lower is better)
Translates to: PPTPLILLLWAP*NRLPVSSPLAL
Trigger: CAGCGCAAGCGGGCTGGATACCGGGAGCCGATTCCAGGGCGCCCACAGAAGCAGAATCAGAGGGGTAGGCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370200.6
3UTR GCA 72 bp TTCCGGACCACACCCCTCCCATGTGGCCAGGCTCCCTaGGTTGGGCCCCAGAGGACAAACTCTGACGCTGAG +
Preference number: 3 (lower is better)
Translates to: FRTTPLPCGQAP*VGPQRTNSDAE
Trigger: CTCAGCGTCAGAGTTTGTCCTCTGGGGCCCAACGCAGGGAGCCTGGCCACATGGGAGGGGTGTGGTCCGGAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370200.6
3UTR CCA 72 bp AGCTATGGGCCCGCAGAGGGCGTCTTGGAGCCCAGCTaGGCGAAGAACAAGCTAGGGGCGGATTCCCTGGCT +
Preference number: 3 (lower is better)
Translates to: SYGPAEGVLEPS*AKNKLGADSLA
Trigger: AGCCAGGGAATCCGCCCCTAGCTTGTTCTTCGCCCAGCTGGGCTCCAAGACGCCCTCTGCGGGCCCATAGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370200.6
3UTR-3UTR CAA 90 bp CCGCTTGCGCTGTTGTGCGCGGCTCCTAGGGCCGCCCGCTTCCAGCCTGGGTTCTACCACACTGCTACCTaGGAGTCAAATAGGCCTCCC +
Preference number: 3 (lower is better)
Translates to: PLALLCAAPRAARFQPGFYHTAT*ESNRPP
Trigger: GGGAGGCCTATTTGACTCCAAGGTAGCAGTGTGGTA...GAACCCAGGCTGGAAGCGGGCGGCCCTAGGAGCCGCGCACAACAGCGCAAGCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370200.6
3UTR-3UTR CAA 90 bp TCCAGCCCGCTTGCGCTGTTGTGCGCGGCTCCTAGGGCCGCCCGCTTCCAGCCTAATGAGGAAAGAGATTaGGGGACCCCAAGCCAGAGA +
Preference number: 3 (lower is better)
Translates to: SSPLALLCAAPRAARFQPNEERD*GTPSQR
Trigger: TCTCTGGCTTGGGGTCCCCAAATCTCTTTCCTCATT...AGGCTGGAAGCGGGCGGCCCTAGGAGCCGCGCACAACAGCGCAAGCGGGCTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370200.6
3UTR-3UTR CAA 90 bp TGGGCGAAGAACAAGCTAGGGGCGGATTCCCTGGCTGATGCTGGGACTCACACCGCCAGGCTCCCTGCGTaGGGCCCCAGAGGACAAACT +
Preference number: 3 (lower is better)
Translates to: WAKNKLGADSLADAGTHTARLPA*GPRGQT
Trigger: AGTTTGTCCTCTGGGGCCCAACGCAGGGAGCCTGGC...GGTGTGAGTCCCAGCATCAGCCAGGGAATCCGCCCCTAGCTTGTTCTTCGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370200.6
3UTR-3UTR CAA 90 bp CCTACCCCTCTGATTCTGCTTCTGTGGGCGCCCTGGAATCGGCTCCCGGTATCCAAGCAGGACCTGGGGTaGGAGTTCCGGACCACACCC +
Preference number: 3 (lower is better)
Translates to: PTPLILLLWAPWNRLPVSKQDLG*EFRTTP
Trigger: GGGTGTGGTCCGGAACTCCAACCCCAGGTCCTGCTT...GGATACCGGGAGCCGATTCCAGGGCGCCCACAGAAGCAGAATCAGAGGGGTAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370200.6
3UTR TCA 72 bp CTGGGCGAAGAACAAGCTAGGGGCGGATTCCCTGGCTaGTGCTGGGACTCACACCCACGTCCCCTCTTTCAG +
Preference number: 3 (lower is better)
Translates to: LGEEQARGGFPG*CWDSHPRPLFQ
Trigger: CTGAAAGAGGGGACGTGGGTGTGAGTCCCAGCATCAGCCAGGGAATCCGCCCCTAGCTTGTTCTTCGCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370200.6
3UTR-3UTR CAA 90 bp TGGGCGAAGAACAAGCTAGGGGCGGATTCCCTGGCTGATGCTGGGACTCACACCCTGGGAAACAACCTGTaGGAGGTCCTACTGGCCAGG +
Preference number: 3 (lower is better)
Translates to: WAKNKLGADSLADAGTHTLGNNL*EVLLAR
Trigger: CCTGGCCAGTAGGACCTCCAACAGGTTGTTTCCCAG...GGTGTGAGTCCCAGCATCAGCCAGGGAATCCGCCCCTAGCTTGTTCTTCGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370200.6
3UTR CCA 72 bp ATCTCCTGCATGGGCCCCTTTGTACCCCACCGGTCCTaGTCTCAGCTTCTCTCCCTACCCTCCTCCAGCTTT +
Preference number: 3 (lower is better)
Translates to: ISCMGPFVPHRS*SQLLSLPSSSF
Trigger: AAAGCTGGAGGAGGGTAGGGAGAGAAGCTGAGACCAGGACCGGTGGGGTACAAAGGGGCCCATGCAGGAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370200.6
3UTR CCA 72 bp GGAGGAAGGGCAGTTAGAACTGTGGCCCAGCAGGGCTaGAAGAAGTGGAGAATCCTGGTGCCTGCACCTCTG +
Preference number: 3 (lower is better)
Translates to: GGRAVRTVAQQG*KKWRILVPAPL
Trigger: CAGAGGTGCAGGCACCAGGATTCTCCACTTCTTCCAGCCCTGCTGGGCCACAGTTCTAACTGCCCTTCCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370200.6
3UTR-3UTR CAA 90 bp CTGATTCTGCTTCTGTGGGCGCCCTGGAATCGGCTCCCGGTATCCAGCCCGCTTCCGCTGTTCTCTCTCTaGTACAAAAGACGGCAGACA +
Preference number: 3 (lower is better)
Translates to: LILLLWAPWNRLPVSSPLPLFSL*YKRRQT
Trigger: TGTCTGCCGTCTTTTGTACAAGAGAGAGAACAGCGG...AAGCGGGCTGGATACCGGGAGCCGATTCCAGGGCGCCCACAGAAGCAGAATCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370200.6
3UTR CCA 72 bp GCAGTTAGAACTGTGGCCCAGCAGGGCTGGAAGAAGTaGAGAATCCTGGTGCCTGCACCTCTGTGTCTGCTC +
Preference number: 3 (lower is better)
Translates to: AVRTVAQQGWKK*RILVPAPLCLL
Trigger: GAGCAGACACAGAGGTGCAGGCACCAGGATTCTCCACTTCTTCCAGCCCTGCTGGGCCACAGTTCTAACTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370200.6
3UTR CCA 72 bp CGCTTCCAGCCTGGGTTCGGCAATAAAAACTGTCGCTaGCTTAAGGACCCGGGGCAAGCCAGCAGTAGATGG +
Preference number: 3 (lower is better)
Translates to: RFQPGFGNKNCR*LKDPGQASSRW
Trigger: CCATCTACTGCTGGCTTGCCCCGGGTCCTTAAGCCAGCGACAGTTTTTATTGCCGAACCCAGGCTGGAAGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370200.6
3UTR-3UTR CAA 90 bp CTCTATCCAGTTTATGCTTTCATTTTGGGGGCCAACCCACATAGCCCTGTTCCCCCTGCATGGGCCCCTTaGTACCCCACCGGTCCTGGT +
Preference number: 3 (lower is better)
Translates to: LYPVYAFILGANPHSPVPPAWAP*YPTGPG
Trigger: ACCAGGACCGGTGGGGTACAAAGGGGCCCATGCAGG...GGGAACAGGGCTATGTGGGTTGGCCCCCAAAATGAAAGCATAAACTGGATAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 1 transcripts:
ENST00000370200.6
3UTR TCA 72 bp GGGAGGGGAAAACTGAGGCTGCTAGGAGGCTGCTCCTaGACACCTACAAAGTCGGCTAACGCGATTAAGGAG +
Preference number: 3 (lower is better)
Translates to: GRGKLRLLGGCS*TPTKSANAIKE
Trigger: CTCCTTAATCGCGTTAGCCGACTTTGTAGGTGTTCAGGAGCAGCCTCCTAGCAGCCTCAGTTTTCCCCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370200.6
3UTR CCA 72 bp GCCCTGCAGCTTCTGGAAGCCAGAGTTCTGTTAGTGTaGGAGGCCTCCCAGGGATATTCAGTTTTCATGTGC +
Preference number: 3 (lower is better)
Translates to: ALQLLEARVLLV*EASQGYSVFMC
Trigger: GCACATGAAAACTGAATATCCCTGGGAGGCCTCCCACACTAACAGAACTCTGGCTTCCAGAAGCTGCAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370200.6
3UTR CCA 72 bp AAATGGGTAGATTCCTATGGGAGCTGGGGAAGGGTATaGACCACACAGGTGACCAAACTTCCACCCTCCTCT +
Preference number: 3 (lower is better)
Translates to: KWVDSYGSWGRV*TTQVTKLPPSS
Trigger: AGAGGAGGGTGGAAGTTTGGTCACCTGTGTGGTCCATACCCTTCCCCAGCTCCCATAGGAATCTACCCATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370200.6
3UTR CCA 72 bp GGCTTCTGCAGGAAATGGGTAGATTCCTATGGGAGCTaGGGAAGGGTATGGACCACACAGGTGACCAAACTT +
Preference number: 3 (lower is better)
Translates to: GFCRKWVDSYGS*GRVWTTQVTKL
Trigger: AAGTTTGGTCACCTGTGTGGTCCATACCCTTCCCCAGCTCCCATAGGAATCTACCCATTTCCTGCAGAAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370200.6
3UTR GCA 72 bp GCAGATAGGAAACAGCCTTACCATGACTCTGGCTTCTaGAGGAAATGGGTAGATTCCTATGGGAGCTGGGGA +
Preference number: 3 (lower is better)
Translates to: ADRKQPYHDSGF*RKWVDSYGSWG
Trigger: TCCCCAGCTCCCATAGGAATCTACCCATTTCCTGCAGAAGCCAGAGTCATGGTAAGGCTGTTTCCTATCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370200.6
3UTR CCA 72 bp AAACAGCCTTACCATGACTCTGGCTTCTGCAGGAAATaGGTAGATTCCTATGGGAGCTGGGGAAGGGTATGG +
Preference number: 3 (lower is better)
Translates to: KQPYHDSGFCRK*VDSYGSWGRVW
Trigger: CCATACCCTTCCCCAGCTCCCATAGGAATCTACCCATTTCCTGCAGAAGCCAGAGTCATGGTAAGGCTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370200.6
3UTR TCA 72 bp GGCTGTCGCCATCTACACACAGCGCCTCGGCCTCGCTaGCTTATGCTTTCATTCTTTCCTCCAATCATTAAA +
Preference number: 3 (lower is better)
Translates to: GCRHLHTAPRPR*LMLSFFPPIIK
Trigger: TTTAATGATTGGAGGAAAGAATGAAAGCATAAGTCAGCGAGGCCGAGGCGCTGTGTGTAGATGGCGACAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370200.6
3UTR CCA 72 bp ATGAGCAAAGAAGCAGATAATGTATATCAGCCCCAATaGAGGGCAGACGGGGAAGATAACTTCCCTCCAGCC +
Preference number: 3 (lower is better)
Translates to: MSKEADNVYQPQ*RADGEDNFPPA
Trigger: GGCTGGAGGGAAGTTATCTTCCCCGTCTGCCCTCCATTGGGGCTGATATACATTATCTGCTTCTTTGCTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370200.6
3UTR GCA 72 bp GGCATCTCAGCACGTTTATTAAACCTTTCCCGTCCCTaGGCCCGCATTACTTTAATAATAAATCGCGTGTCA +
Preference number: 3 (lower is better)
Translates to: GISARLLNLSRP*ARITLIINRVS
Trigger: TGACACGCGATTTATTATTAAAGTAATGCGGGCGCAGGGACGGGAAAGGTTTAATAAACGTGCTGAGATGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370200.6
3UTR CCA 72 bp CCTTTGTCCAATACAGAGTGGTATAAGATCTCGAGCTaGCCTCACCTATCTCTCTGCACTGAACTAAGTCAT +
Preference number: 3 (lower is better)
Translates to: PLSNTEWYKISS*PHLSLCTELSH
Trigger: ATGACTTAGTTCAGTGCAGAGAGATAGGTGAGGCCAGCTCGAGATCTTATACCACTCTGTATTGGACAAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370200.6
3UTR GCA 72 bp TTCAGTTTTCATGTGCACATCTGCATAAACTGTCTGTaGATCATTAGAAATCTTTATTGGTGCCTAGCCCTG +
Preference number: 3 (lower is better)
Translates to: FSFHVHICINCL*IIRNLYWCLAL
Trigger: CAGGGCTAGGCACCAATAAAGATTTCTAATGATGCACAGACAGTTTATGCAGATGTGCACATGAAAACTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370200.6
3UTR CAA 72 bp GGGCGCCCTGGAATCGGCTCCCGGTATCCAGCCCGCTaGCGCTGTTGTGCGCGGCTCCTAGGGCCGCCCGCT +
Preference number: 4 (lower is better)
Translates to: GRPGIGSRYPAR*RCCARLLGPPA
Trigger: AGCGGGCGGCCCTAGGAGCCGCGCACAACAGCGCAAGCGGGCTGGATACCGGGAGCCGATTCCAGGGCGCCC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370200.6
CDS-3UTR TCA 90 bp CCGCTTGCGCTGTTGTGCGCGGCTCCTAGGGCCGCCCGCTTCCAGCCTGGGTTCCCGGGTGTGCCACAGTaGGGTTGGCATCGGGCCGAG +
Preference number: 4 (lower is better)
Translates to: PLALLCAAPRAARFQPGFPGVPQ*GWHRAE
Trigger: CTCGGCCCGATGCCAACCTCACTGTGGCACACCCGG...GAACCCAGGCTGGAAGCGGGCGGCCCTAGGAGCCGCGCACAACAGCGCAAGCGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370200.6
CDS-3UTR CCA 90 bp CGCTGTTGTGCGCGGCTCCTAGGGCCGCCCGCTTCCAGCCTGGGTTCGGCAATACGCGGCGCACTCTTCTaGCCGGCAGGGAGCGCAGCC +
Preference number: 4 (lower is better)
Translates to: RCCARLLGPPASSLGSAIRGALF*PAGSAA
Trigger: GGCTGCGCTCCCTGCCGGCCAGAAGAGTGCGCCGCG...TATTGCCGAACCCAGGCTGGAAGCGGGCGGCCCTAGGAGCCGCGCACAACAGCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370200.6
CDS-3UTR CCA 90 bp TCCGGACCACACCCCTCCCATGTGGCCAGGCTCCCTGCGTTGGGCCCCAGAGGACAGGCCCTCCCGCAGTaGCGCCAGGATCCGGGTGGA +
Preference number: 4 (lower is better)
Translates to: SGPHPSHVARLPALGPRGQALPQ*RQDPGG
Trigger: TCCACCCGGATCCTGGCGCCACTGCGGGAGGGCCTG...TCCTCTGGGGCCCAACGCAGGGAGCCTGGCCACATGGGAGGGGTGTGGTCCGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370200.6
CDS-3UTR TCA 90 bp TCCGGACCACACCCCTCCCATGTGGCCAGGCTCCCTGCGTTGGGCCCCAGAGGAGCAGGGGCCTCCACTTaGCCCAGGGCATTGCGGCCA +
Preference number: 4 (lower is better)
Translates to: SGPHPSHVARLPALGPRGAGAST*PRALRP
Trigger: TGGCCGCAATGCCCTGGGTCAAGTGGAGGCCCCTGC...TCCTCTGGGGCCCAACGCAGGGAGCCTGGCCACATGGGAGGGGTGTGGTCCGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370200.6
CDS-3UTR CCA 90 bp CCGCTTGCGCTGTTGTGCGCGGCTCCTAGGGCCGCCCGCTTCCAGCCTGGGTTCGCGCCGCAGGTAATCTaGGCCTGGGGATGGCCTTGC +
Preference number: 4 (lower is better)
Translates to: PLALLCAAPRAARFQPGFAPQVI*AWGWPC
Trigger: GCAAGGCCATCCCCAGGCCCAGATTACCTGCGGCGC...GAACCCAGGCTGGAAGCGGGCGGCCCTAGGAGCCGCGCACAACAGCGCAAGCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370200.6
CDS-3UTR TCA 90 bp TCCGGACCACACCCCTCCCATGTGGCCAGGCTCCCTGCGTTGGGCCCCAGAGGACCCCGCCTACCCCTCTaGTTCTGCTTCTGTGGGCGC +
Preference number: 4 (lower is better)
Translates to: SGPHPSHVARLPALGPRGPRLPL*FCFCGR
Trigger: GCGCCCACAGAAGCAGAATCAGAGGGGTAGGCGGGG...TCCTCTGGGGCCCAACGCAGGGAGCCTGGCCACATGGGAGGGGTGTGGTCCGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000370200.6
CDS-3UTR GCA 90 bp GAGTTCCGGACCACACCCCTCCCATGTGGCCAGGCTCCCTGCGTTGGGCCCCAGGGTATCCAGCCCGCTTaGGCTGTTGTGCGCGGCTCC +
Preference number: 4 (lower is better)
Translates to: EFRTTPLPCGQAPCVGPQGIQPA*AVVRGS
Trigger: GGAGCCGCGCACAACAGCGCAAGCGGGCTGGATACC...CTGGGGCCCAACGCAGGGAGCCTGGCCACATGGGAGGGGTGTGGTCCGGAACTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370200.6
CDS-3UTR CCA 90 bp GAGTTCCGGACCACACCCCTCCCATGTGGCCAGGCTCCCTGCGTTGGGCCCCAGGCTGGCCCTCGAGGTTaGCGCATTCCCAGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: EFRTTPLPCGQAPCVGPQAGPRG*RIPSSS
Trigger: GCTGCTGCTGGGAATGCGCCAACCTCGAGGGCCAGC...CTGGGGCCCAACGCAGGGAGCCTGGCCACATGGGAGGGGTGTGGTCCGGAACTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370200.6
CDS-3UTR CCA 90 bp TCCAGCCCGCTTGCGCTGTTGTGCGCGGCTCCTAGGGCCGCCCGCTTCCAGCCTGGATGTGACACGATCTaGGGCCCCGATTCGCAGGGC +
Preference number: 4 (lower is better)
Translates to: SSPLALLCAAPRAARFQPGCDTI*GPDSQG
Trigger: GCCCTGCGAATCGGGGCCCCAGATCGTGTCACATCC...AGGCTGGAAGCGGGCGGCCCTAGGAGCCGCGCACAACAGCGCAAGCGGGCTGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370200.6
CDS-3UTR CCA 90 bp TCCGGACCACACCCCTCCCATGTGGCCAGGCTCCCTGCGTTGGGCCCCAGAGGACACACCCCTCCCATGTaGCCAGGCTCCCTGCGTTGG +
Preference number: 4 (lower is better)
Translates to: SGPHPSHVARLPALGPRGHTPPM*PGSLRW
Trigger: CCAACGCAGGGAGCCTGGCCACATGGGAGGGGTGTG...TCCTCTGGGGCCCAACGCAGGGAGCCTGGCCACATGGGAGGGGTGTGGTCCGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370200.6
3UTR CAA 72 bp TGGAATCGGCTCCCGGTATCCAGCCCGCTTGCGCTGTaGTGCGCGGCTCCTAGGGCCGCCCGCTTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: WNRLPVSSPLAL*CAAPRAARFQP
Trigger: AGGCTGGAAGCGGGCGGCCCTAGGAGCCGCGCACAACAGCGCAAGCGGGCTGGATACCGGGAGCCGATTCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370200.6
CDS-3UTR GCA 90 bp CCCCCGCCTACCCCTCTGATTCTGCTTCTGTGGGCGCCCTGGAATCGGCTCCCGTTAAAGCGGGTCCGCTaGAGCAGAGGCGGGGTGCGG +
Preference number: 4 (lower is better)
Translates to: PPPTPLILLLWAPWNRLPLKRVR*SRGGVR
Trigger: CCGCACCCCGCCTCTGCTGCAGCGGACCCGCTTTAA...CGGGAGCCGATTCCAGGGCGCCCACAGAAGCAGAATCAGAGGGGTAGGCGGGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370200.6
CDS-3UTR CCA 90 bp TCCGGACCACACCCCTCCCATGTGGCCAGGCTCCCTGCGTTGGGCCCCAGAGGACTTCTGTGGGCGCCCTaGAATCGGCTCCCGGTATCC +
Preference number: 4 (lower is better)
Translates to: SGPHPSHVARLPALGPRGLLWAP*NRLPVS
Trigger: GGATACCGGGAGCCGATTCCAGGGCGCCCACAGAAG...TCCTCTGGGGCCCAACGCAGGGAGCCTGGCCACATGGGAGGGGTGTGGTCCGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370200.6
3UTR CAA 72 bp GGACGCGGTAGGAGCTATGGGCCCGCAGAGGGCGTCTaGGAGCCCAGCTGGGCGAAGAACAAGCTAGGGGCG +
Preference number: 4 (lower is better)
Translates to: GRGRSYGPAEGV*EPSWAKNKLGA
Trigger: CGCCCCTAGCTTGTTCTTCGCCCAGCTGGGCTCCAAGACGCCCTCTGCGGGCCCATAGCTCCTACCGCGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370200.6
3UTR CAA 72 bp GGGACCTGCGTGACCCTCTCCGGTGGGGTGGGGCTTTaGGTGAGGAGCCTCTGCTCTGCAGGTGGACGCGGT +
Preference number: 4 (lower is better)
Translates to: GTCVTLSGGVGL*VRSLCSAGGRG
Trigger: ACCGCGTCCACCTGCAGAGCAGAGGCTCCTCACCAAAAGCCCCACCCCACCGGAGAGGGTCACGCAGGTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370200.6
CDS-3UTR TCA 90 bp CGCTGTTGTGCGCGGCTCCTAGGGCCGCCCGCTTCCAGCCTGGGTTCGGCAATAGGCGGATTCCCTGGCTaGTGCTGGGACTCACACCCA +
Preference number: 4 (lower is better)
Translates to: RCCARLLGPPASSLGSAIGGFPG*CWDSHP
Trigger: TGGGTGTGAGTCCCAGCATCAGCCAGGGAATCCGCC...TATTGCCGAACCCAGGCTGGAAGCGGGCGGCCCTAGGAGCCGCGCACAACAGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370200.6
CDS-3UTR CCA 90 bp TCCAGCCCGCTTGCGCTGTTGTGCGCGGCTCCTAGGGCCGCCCGCTTCCAGCCTCGTAGAAGTGAGCACTaGGGTCCAGGTCGCAGAGCT +
Preference number: 4 (lower is better)
Translates to: SSPLALLCAAPRAARFQPRRSEH*GPGRRA
Trigger: AGCTCTGCGACCTGGACCCCAGTGCTCACTTCTACG...AGGCTGGAAGCGGGCGGCCCTAGGAGCCGCGCACAACAGCGCAAGCGGGCTGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370200.6
CDS-3UTR CCA 90 bp CCCCCGCCTACCCCTCTGATTCTGCTTCTGTGGGCGCCCTGGAATCGGCTCCCGGGAGGGAGGGGGCGGTaGACAACAGTTCTCCCATTC +
Preference number: 4 (lower is better)
Translates to: PPPTPLILLLWAPWNRLPGGRGR*TTVLPF
Trigger: GAATGGGAGAACTGTTGTCCACCGCCCCCTCCCTCC...CGGGAGCCGATTCCAGGGCGCCCACAGAAGCAGAATCAGAGGGGTAGGCGGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000370200.6
CDS-3UTR TCA 90 bp GGGAGGGGGCGGTGGACAACAGTTCTCCCATTCCAGGCTGTGGTGCTTGAACCACCAGGCTGTGGTGCTTaGACCAGCAGGGCGGGGAGG +
Preference number: 4 (lower is better)
Translates to: GRGRWTTVLPFQAVVLEPPGCGA*TSRAGR
Trigger: CCTCCCCGCCCTGCTGGTTCAAGCACCACAGCCTGG...TGGTTCAAGCACCACAGCCTGGAATGGGAGAACTGTTGTCCACCGCCCCCTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370200.6
CDS-3UTR GCA 90 bp AGGGCCGCCCGCTTCCAGCCTGGGTTCGGCAATAAAAACTGTCGCTGGCTTAAGCCGCTTGCGCTGTTGTaGGCGGCTCCTAGGGCCGCC +
Preference number: 4 (lower is better)
Translates to: RAARFQPGFGNKNCRWLKPLALL*AAPRAA
Trigger: GGCGGCCCTAGGAGCCGCGCACAACAGCGCAAGCGG...CTTAAGCCAGCGACAGTTTTTATTGCCGAACCCAGGCTGGAAGCGGGCGGCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370200.6
CDS-3UTR CCA 90 bp CAGGTGGACGCGGTAGGAGCTATGGGCCCGCAGAGGGCGTCTTGGAGCCCAGCTCCTTCCTCCACTCGATaGAGGCCATGGGGTAGGCAA +
Preference number: 4 (lower is better)
Translates to: QVDAVGAMGPQRASWSPAPSSTR*RPWGRQ
Trigger: TTGCCTACCCCATGGCCTCCATCGAGTGGAGGAAGG...AGCTGGGCTCCAAGACGCCCTCTGCGGGCCCATAGCTCCTACCGCGTCCACCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370200.6
CDS-3UTR TCA 90 bp TCCGGACCACACCCCTCCCATGTGGCCAGGCTCCCTGCGTTGGGCCCCAGAGGACCTTCGCAGCAGCCGTaGTTCGAGTCCGAAAGAAAA +
Preference number: 4 (lower is better)
Translates to: SGPHPSHVARLPALGPRGPSQQP*FESERK
Trigger: TTTTCTTTCGGACTCGAATCACGGCTGCTGCGAAGG...TCCTCTGGGGCCCAACGCAGGGAGCCTGGCCACATGGGAGGGGTGTGGTCCGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370200.6
CDS-3UTR GCA 90 bp TGGGCGAAGAACAAGCTAGGGGCGGATTCCCTGGCTGATGCTGGGACTCACACCGCAGGGCCCCGGGTGTaGCACAGTGAGGTTGGCATC +
Preference number: 4 (lower is better)
Translates to: WAKNKLGADSLADAGTHTAGPRV*HSEVGI
Trigger: GATGCCAACCTCACTGTGGCACACCCGGGGCCCTGC...GGTGTGAGTCCCAGCATCAGCCAGGGAATCCGCCCCTAGCTTGTTCTTCGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370200.6
CDS-3UTR CCA 90 bp CTGATTCTGCTTCTGTGGGCGCCCTGGAATCGGCTCCCGGTATCCAGCCCGCTTCAGGTAATCTGGGCCTaGGGATGGCCTTGCGCCGGT +
Preference number: 4 (lower is better)
Translates to: LILLLWAPWNRLPVSSPLQVIWA*GWPCAG
Trigger: ACCGGCGCAAGGCCATCCCCAGGCCCAGATTACCTG...AAGCGGGCTGGATACCGGGAGCCGATTCCAGGGCGCCCACAGAAGCAGAATCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370200.6
CDS-3UTR CCA 90 bp TGGGCGAAGAACAAGCTAGGGGCGGATTCCCTGGCTGATGCTGGGACTCACACCGCGCCGGGCGGATTTTaGCCACAGCGCCGAACAGCA +
Preference number: 4 (lower is better)
Translates to: WAKNKLGADSLADAGTHTAPGGF*PQRRTA
Trigger: TGCTGTTCGGCGCTGTGGCCAAAATCCGCCCGGCGC...GGTGTGAGTCCCAGCATCAGCCAGGGAATCCGCCCCTAGCTTGTTCTTCGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370200.6
CDS-3UTR TCA 90 bp CCCTCTTTCAGCGCCGGGCGGATTTTGGCCACAGCGCCGAACAGCACGCCCCACTATGGACCACACAGGTaGCCAAACTTCCACCCTCCT +
Preference number: 4 (lower is better)
Translates to: PSFSAGRILATAPNSTPHYGPHR*PNFHPP
Trigger: AGGAGGGTGGAAGTTTGGTCACCTGTGTGGTCCATA...GTGGGGCGTGCTGTTCGGCGCTGTGGCCAAAATCCGCCCGGCGCTGAAAGAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370200.6
CDS-3UTR GCA 90 bp GCTTCCAGCCTGGGTTCGGCAATAAAAACTGTCGCTGGCTTAAGGACCCGGGGCCTGCACCTCTGTGTCTaGTCAGGCCCCCACCCCAGC +
Preference number: 4 (lower is better)
Translates to: ASSLGSAIKTVAGLRTRGLHLCV*SGPHPS
Trigger: GCTGGGGTGGGGGCCTGAGCAGACACAGAGGTGCAG...GCCCCGGGTCCTTAAGCCAGCGACAGTTTTTATTGCCGAACCCAGGCTGGAAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000370200.6
CDS-3UTR GCA 90 bp TCCAGCCCGCTTGCGCTGTTGTGCGCGGCTCCTAGGGCCGCCCGCTTCCAGCCTAACCTTTCCCGTCCCTaGGCCCGCATTACTTTAATA +
Preference number: 4 (lower is better)
Translates to: SSPLALLCAAPRAARFQPNLSRP*ARITLI
Trigger: TATTAAAGTAATGCGGGCGCAGGGACGGGAAAGGTT...AGGCTGGAAGCGGGCGGCCCTAGGAGCCGCGCACAACAGCGCAAGCGGGCTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370200.6
CDS-3UTR CCA 90 bp CCCACCCCAGCCTGGGAAACAACCTGTTGGAGGTCCTACTGGCCAGGGCATCTCAGGGCATCTCCTGCATaGGCCCCTTTGTACCCCACC +
Preference number: 4 (lower is better)
Translates to: PTPAWETTCWRSYWPGHLRASPA*APLYPT
Trigger: GGTGGGGTACAAAGGGGCCCATGCAGGAGATGCCCT...GAGATGCCCTGGCCAGTAGGACCTCCAACAGGTTGTTTCCCAGGCTGGGGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370200.6
CDS-3UTR GCA 90 bp CGCTGTTGTGCGCGGCTCCTAGGGCCGCCCGCTTCCAGCCTGGGTTCGGCAATAACTGCAGTTAGTAGGTaGAACTGGGGCTTAGGAGAG +
Preference number: 4 (lower is better)
Translates to: RCCARLLGPPASSLGSAITAVSR*NWGLGE
Trigger: CTCTCCTAAGCCCCAGTTGCACCTACTAACTGCAGT...TATTGCCGAACCCAGGCTGGAAGCGGGCGGCCCTAGGAGCCGCGCACAACAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370200.6
CDS-3UTR GCA 90 bp CCCACCCCAGCCTGGGAAACAACCTGTTGGAGGTCCTACTGGCCAGGGCATCTCAACGCGATTAAGGAGTaGGGATTCCCCGGGACCTGC +
Preference number: 4 (lower is better)
Translates to: PTPAWETTCWRSYWPGHLNAIKE*GFPGTC
Trigger: GCAGGTCCCGGGGAATCCGCACTCCTTAATCGCGTT...GAGATGCCCTGGCCAGTAGGACCTCCAACAGGTTGTTTCCCAGGCTGGGGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370200.6
CDS-3UTR CCA 90 bp CCTTTCCAGGTCTTTTCAAGAGCAGGGATGAACACTATAGCCGCTCACCCACCCGCGGCGGCGGCAGCATaGTTAGCGGGAAGCCCTGCG +
Preference number: 4 (lower is better)
Translates to: PFQVFSRAGMNTIAAHPPAAAAA*LAGSPA
Trigger: CGCAGGGCTTCCCGCTAACCATGCTGCCGCCGCCGC...GGGTGGGTGAGCGGCTATAGTGTTCATCCCTGCTCTTGAAAAGACCTGGAAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370200.6
CDS-3UTR CCA 90 bp CCCTCTTTCAGCGCCGGGCGGATTTTGGCCACAGCGCCGAACAGCACGCCCCACTTTAGTGATCGCAGCTaGGGGATGCCTGTAGAGTTC +
Preference number: 4 (lower is better)
Translates to: PSFSAGRILATAPNSTPHFSDRS*GMPVEF
Trigger: GAACTCTACAGGCATCCCCCAGCTGCGATCACTAAA...GTGGGGCGTGCTGTTCGGCGCTGTGGCCAAAATCCGCCCGGCGCTGAAAGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370200.6
CDS-3UTR CCA 90 bp CGCTGTTGTGCGCGGCTCCTAGGGCCGCCCGCTTCCAGCCTGGGTTCGGCAATAACCACACTGCTACCTTaGAGTCAAATAGGCCTCCCA +
Preference number: 4 (lower is better)
Translates to: RCCARLLGPPASSLGSAITTLLP*SQIGLP
Trigger: TGGGAGGCCTATTTGACTCCAAGGTAGCAGTGTGGT...TATTGCCGAACCCAGGCTGGAAGCGGGCGGCCCTAGGAGCCGCGCACAACAGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370200.6
CDS-3UTR CCA 90 bp CTCCTAGGGCCGCCCGCTTCCAGCCTGGGTTCGGCAATAAAAACTGTCGCTGGCGTGGCCCAGCAGGGCTaGAAGAAGTGGAGAATCCTG +
Preference number: 4 (lower is better)
Translates to: LLGPPASSLGSAIKTVAGVAQQG*KKWRIL
Trigger: CAGGATTCTCCACTTCTTCCAGCCCTGCTGGGCCAC...GCCAGCGACAGTTTTTATTGCCGAACCCAGGCTGGAAGCGGGCGGCCCTAGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370200.6
CDS-3UTR CCA 90 bp CCCTCTTTCAGCGCCGGGCGGATTTTGGCCACAGCGCCGAACAGCACGCCCCACGTTAGTAGGTGCAACTaGGGCTTAGGAGAGAGGGAA +
Preference number: 4 (lower is better)
Translates to: PSFSAGRILATAPNSTPHVSRCN*GLGERE
Trigger: TTCCCTCTCTCCTAAGCCCCAGTTGCACCTACTAAC...GTGGGGCGTGCTGTTCGGCGCTGTGGCCAAAATCCGCCCGGCGCTGAAAGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370200.6
CDS-3UTR CCA 90 bp AGGGCCGCCCGCTTCCAGCCTGGGTTCGGCAATAAAAACTGTCGCTGGCTTAAGAGCAGGACCTGGGGTTaGAGTTCCGGACCACACCCC +
Preference number: 4 (lower is better)
Translates to: RAARFQPGFGNKNCRWLKSRTWG*SSGPHP
Trigger: GGGGTGTGGTCCGGAACTCCAACCCCAGGTCCTGCT...CTTAAGCCAGCGACAGTTTTTATTGCCGAACCCAGGCTGGAAGCGGGCGGCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370200.6
CDS-3UTR CCA 90 bp CCCACCCCAGCCTGGGAAACAACCTGTTGGAGGTCCTACTGGCCAGGGCATCTCCTGATTCTGCTTCTGTaGGCGCCCTGGAATCGGCTC +
Preference number: 4 (lower is better)
Translates to: PTPAWETTCWRSYWPGHLLILLL*APWNRL
Trigger: GAGCCGATTCCAGGGCGCCCACAGAAGCAGAATCAG...GAGATGCCCTGGCCAGTAGGACCTCCAACAGGTTGTTTCCCAGGCTGGGGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370200.6
CDS-3UTR GCA 90 bp TCCAGCCTGGGTTCGGCAATAAAAACTGTCGCTGGCTTAAGGACCCGGGGCAAGGTTAGCGGGAAGCCCTaGGAGCACTCGGGGCATCAG +
Preference number: 4 (lower is better)
Translates to: SSLGSAIKTVAGLRTRGKVSGKP*EHSGHQ
Trigger: CTGATGCCCCGAGTGCTCGCAGGGCTTCCCGCTAAC...CTTGCCCCGGGTCCTTAAGCCAGCGACAGTTTTTATTGCCGAACCCAGGCTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370200.6
CDS-3UTR GCA 90 bp AACAAGCTAGATAAACGTTGGGGACCAGGAAATAGCAAGAACCAGGGCCTGGGAGCGCGGGCCGCCTCCTaGAGGCGGCAGATCTGGGAG +
Preference number: 4 (lower is better)
Translates to: NKLDKRWGPGNSKNQGLGARAAS*RRQIWE
Trigger: CTCCCAGATCTGCCGCCTGCAGGAGGCGGCCCGCGC...TCCCAGGCCCTGGTTCTTGCTATTTCCTGGTCCCCAACGTTTATCTAGCTTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370200.6
CDS-3UTR CCA 90 bp CTCCTAGGGCCGCCCGCTTCCAGCCTGGGTTCGGCAATAAAAACTGTCGCTGGCTCATCCCCTGGCAGCTaGATGTCCAAGCCATCCTTC +
Preference number: 4 (lower is better)
Translates to: LLGPPASSLGSAIKTVAGSSPGS*MSKPSF
Trigger: GAAGGATGGCTTGGACATCCAGCTGCCAGGGGATGA...GCCAGCGACAGTTTTTATTGCCGAACCCAGGCTGGAAGCGGGCGGCCCTAGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370200.6
CDS-3UTR CCA 90 bp CCTACCCCTCTGATTCTGCTTCTGTGGGCGCCCTGGAATCGGCTCCCGGTATCCTGGGAAACAACCTGTTaGAGGTCCTACTGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: PTPLILLLWAPWNRLPVSWETTC*RSYWPG
Trigger: CCCTGGCCAGTAGGACCTCCAACAGGTTGTTTCCCA...GGATACCGGGAGCCGATTCCAGGGCGCCCACAGAAGCAGAATCAGAGGGGTAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370200.6
CDS-3UTR CCA 90 bp TCCTGCATGGGCCCCTTTGTACCCCACCGGTCCTGGTCTCAGCTTCTCTCCCTAGGGCAGTTAGAACTGTaGCCCAGCAGGGCTGGAAGA +
Preference number: 4 (lower is better)
Translates to: SCMGPFVPHRSWSQLLSLGQLEL*PSRAGR
Trigger: TCTTCCAGCCCTGCTGGGCCACAGTTCTAACTGCCC...TAGGGAGAGAAGCTGAGACCAGGACCGGTGGGGTACAAAGGGGCCCATGCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370200.6
CDS-3UTR GCA 90 bp TCCAGCCTGGGTTCGGCAATAAAAACTGTCGCTGGCTTAAGGACCCGGGGCAAGCTTGACCCAGGGCATTaGGGCCAAGGCAGCGGTAAG +
Preference number: 4 (lower is better)
Translates to: SSLGSAIKTVAGLRTRGKLDPGH*GQGSGK
Trigger: CTTACCGCTGCCTTGGCCGCAATGCCCTGGGTCAAG...CTTGCCCCGGGTCCTTAAGCCAGCGACAGTTTTTATTGCCGAACCCAGGCTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370200.6
CDS-3UTR CCA 90 bp CCTACCCCTCTGATTCTGCTTCTGTGGGCGCCCTGGAATCGGCTCCCGGTATCCACTCGATGGAGGCCATaGGGTAGGCAAACACTTCAC +
Preference number: 4 (lower is better)
Translates to: PTPLILLLWAPWNRLPVSTRWRP*GRQTLH
Trigger: GTGAAGTGTTTGCCTACCCCATGGCCTCCATCGAGT...GGATACCGGGAGCCGATTCCAGGGCGCCCACAGAAGCAGAATCAGAGGGGTAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370200.6
CDS-3UTR CCA 90 bp TGGGCGAAGAACAAGCTAGGGGCGGATTCCCTGGCTGATGCTGGGACTCACACCGTCACCTCAAACCTCTaGGGTCCACCCCTAAACTGC +
Preference number: 4 (lower is better)
Translates to: WAKNKLGADSLADAGTHTVTSNL*GPPLNC
Trigger: GCAGTTTAGGGGTGGACCCCAGAGGTTTGAGGTGAC...GGTGTGAGTCCCAGCATCAGCCAGGGAATCCGCCCCTAGCTTGTTCTTCGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370200.6
CDS-3UTR CCA 90 bp CTGATTCTGCTTCTGTGGGCGCCCTGGAATCGGCTCCCGGTATCCAGCCCGCTTGTATATCAGCCCCAATaGAGGGCAGACGGGGAAGAT +
Preference number: 4 (lower is better)
Translates to: LILLLWAPWNRLPVSSPLVYQPQ*RADGED
Trigger: ATCTTCCCCGTCTGCCCTCCATTGGGGCTGATATAC...AAGCGGGCTGGATACCGGGAGCCGATTCCAGGGCGCCCACAGAAGCAGAATCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370200.6
CDS-3UTR CCA 90 bp CGCTGTTGTGCGCGGCTCCTAGGGCCGCCCGCTTCCAGCCTGGGTTCGGCAATAGCCTGGGGAAGGGTTTaGAATAAGATGAGCAAAGAA +
Preference number: 4 (lower is better)
Translates to: RCCARLLGPPASSLGSAIAWGRV*NKMSKE
Trigger: TTCTTTGCTCATCTTATTCCAAACCCTTCCCCAGGC...TATTGCCGAACCCAGGCTGGAAGCGGGCGGCCCTAGGAGCCGCGCACAACAGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370200.6
CDS-3UTR CCA 90 bp CCCACCCCAGCCTGGGAAACAACCTGTTGGAGGTCCTACTGGCCAGGGCATCTCGATTCCTATGGGAGCTaGGGAAGGGTATGGACCACA +
Preference number: 4 (lower is better)
Translates to: PTPAWETTCWRSYWPGHLDSYGS*GRVWTT
Trigger: TGTGGTCCATACCCTTCCCCAGCTCCCATAGGAATC...GAGATGCCCTGGCCAGTAGGACCTCCAACAGGTTGTTTCCCAGGCTGGGGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370200.6
CDS-3UTR CCA 90 bp GGGACCCTGCTCCCCTTTCCAGGTCTTTTCAAGAGCAGGGATGAACACTATAGCATCCGGGTGGAGCCCTaGCGTGTAGGAGGCTGTCGC +
Preference number: 4 (lower is better)
Translates to: GTLLPFPGLFKSRDEHYSIRVEP*RVGGCR
Trigger: GCGACAGCCTCCTACACGCCAGGGCTCCACCCGGAT...GCTATAGTGTTCATCCCTGCTCTTGAAAAGACCTGGAAAGGGGAGCAGGGTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370200.6
CDS-3UTR TCA 90 bp CTGATTCTGCTTCTGTGGGCGCCCTGGAATCGGCTCCCGGTATCCAGCCCGCTTCAAATAGGCCTCCCATaGTCATCCCTACTGACAGCA +
Preference number: 4 (lower is better)
Translates to: LILLLWAPWNRLPVSSPLQIGLP*SSLLTA
Trigger: TGCTGTCAGTAGGGATGATCATGGGAGGCCTATTTG...AAGCGGGCTGGATACCGGGAGCCGATTCCAGGGCGCCCACAGAAGCAGAATCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370200.6
CDS-3UTR TCA 90 bp CCTACCCCTCTGATTCTGCTTCTGTGGGCGCCCTGGAATCGGCTCCCGGTATCCGAAACAGCCTTACCATaGCTCTGGCTTCTGCAGGAA +
Preference number: 4 (lower is better)
Translates to: PTPLILLLWAPWNRLPVSETALP*LWLLQE
Trigger: TTCCTGCAGAAGCCAGAGTCATGGTAAGGCTGTTTC...GGATACCGGGAGCCGATTCCAGGGCGCCCACAGAAGCAGAATCAGAGGGGTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370200.6
CDS-3UTR TCA 90 bp AGGGCCGCCCGCTTCCAGCCTGGGTTCGGCAATAAAAACTGTCGCTGGCTTAAGCTAGGAGGCTGCTCCTaGACACCTACAAAGTCGGCT +
Preference number: 4 (lower is better)
Translates to: RAARFQPGFGNKNCRWLKLGGCS*TPTKSA
Trigger: AGCCGACTTTGTAGGTGTTCAGGAGCAGCCTCCTAG...CTTAAGCCAGCGACAGTTTTTATTGCCGAACCCAGGCTGGAAGCGGGCGGCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370200.6
CDS-3UTR GCA 90 bp CGGCCAAGCAGGACCTGGGGTTGGAGTTCCGGACCACACCCCTCCCATGTGGCCCCTCTATCCAGTTTATaGTTTCATTTTGGGGGCCAA +
Preference number: 4 (lower is better)
Translates to: RPSRTWGWSSGPHPSHVAPLSSL*FHFGGQ
Trigger: TTGGCCCCCAAAATGAAAGCATAAACTGGATAGAGG...GGCCACATGGGAGGGGTGTGGTCCGGAACTCCAACCCCAGGTCCTGCTTGGCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000370200.6
CDS-3UTR CCA 90 bp CCTTTCCAGGTCTTTTCAAGAGCAGGGATGAACACTATAGCCGCTCACCCACCCGCCCCCACCCCAGCCTaGGAAACAACCTGTTGGAGG +
Preference number: 4 (lower is better)
Translates to: PFQVFSRAGMNTIAAHPPAPTPA*ETTCWR
Trigger: CCTCCAACAGGTTGTTTCCCAGGCTGGGGTGGGGGC...GGGTGGGTGAGCGGCTATAGTGTTCATCCCTGCTCTTGAAAAGACCTGGAAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370200.6
CDS-3UTR CCA 90 bp TCCAGCCTGGGTTCGGCAATAAAAACTGTCGCTGGCTTAAGGACCCGGGGCAAGTCCCATTCCAGGCTGTaGTGCTTGAACCAGCAGGGC +
Preference number: 4 (lower is better)
Translates to: SSLGSAIKTVAGLRTRGKSHSRL*CLNQQG
Trigger: GCCCTGCTGGTTCAAGCACCACAGCCTGGAATGGGA...CTTGCCCCGGGTCCTTAAGCCAGCGACAGTTTTTATTGCCGAACCCAGGCTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370200.6
CDS-3UTR TCA 90 bp TCCAGCCTGGGTTCGGCAATAAAAACTGTCGCTGGCTTAAGGACCCGGGGCAAGAGTGTCATATGGATGTaGCACGATCTGGGGCCCCGA +
Preference number: 4 (lower is better)
Translates to: SSLGSAIKTVAGLRTRGKSVIWM*HDLGPR
Trigger: TCGGGGCCCCAGATCGTGTCACATCCATATGACACT...CTTGCCCCGGGTCCTTAAGCCAGCGACAGTTTTTATTGCCGAACCCAGGCTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000370200.6
CDS-3UTR GCA 90 bp CTCTATCCAGTTTATGCTTTCATTTTGGGGGCCAACCCACATAGCCCTGTTCCCCCCGCCGGCCACCTCTaGTCCGTCCTGAGGACTTCT +
Preference number: 4 (lower is better)
Translates to: LYPVYAFILGANPHSPVPPAGHL*SVLRTS
Trigger: AGAAGTCCTCAGGACGGAGCAGAGGTGGCCGGCGGG...GGGAACAGGGCTATGTGGGTTGGCCCCCAAAATGAAAGCATAAACTGGATAGAG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000370200.6
CDS-3UTR GCA 90 bp CCTACCCCTCTGATTCTGCTTCTGTGGGCGCCCTGGAATCGGCTCCCGGTATCCCCAAAGATCACATCCTaGCCTGTCACATTCCAAGTG +
Preference number: 4 (lower is better)
Translates to: PTPLILLLWAPWNRLPVSPKITS*PVTFQV
Trigger: CACTTGGAATGTGACAGGGCAGGATGTGATCTTTGG...GGATACCGGGAGCCGATTCCAGGGCGCCCACAGAAGCAGAATCAGAGGGGTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370200.6
CDS-3UTR GCA 90 bp TCTGGCTTCTGCAGGAAATGGGTAGATTCCTATGGGAGCTGGGGAAGGGTATGGTTGGTGAGGAGCCTCTaGTCTGCAGGTGGACGCGGT +
Preference number: 4 (lower is better)
Translates to: SGFCRKWVDSYGSWGRVWLVRSL*SAGGRG
Trigger: ACCGCGTCCACCTGCAGAGCAGAGGCTCCTCACCAA...CCATACCCTTCCCCAGCTCCCATAGGAATCTACCCATTTCCTGCAGAAGCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370200.6
CDS-3UTR CCA 90 bp AGGGCCGCCCGCTTCCAGCCTGGGTTCGGCAATAAAAACTGTCGCTGGCTTAAGAGCTGGGGAAGGGTATaGACCACACAGGTGACCAAA +
Preference number: 4 (lower is better)
Translates to: RAARFQPGFGNKNCRWLKSWGRV*TTQVTK
Trigger: TTTGGTCACCTGTGTGGTCCATACCCTTCCCCAGCT...CTTAAGCCAGCGACAGTTTTTATTGCCGAACCCAGGCTGGAAGCGGGCGGCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370200.6
CDS-3UTR TCA 90 bp TGGGCGAAGAACAAGCTAGGGGCGGATTCCCTGGCTGATGCTGGGACTCACACCCATGATCATCCCTACTaGCAGCATGAAAGCAGTCGA +
Preference number: 4 (lower is better)
Translates to: WAKNKLGADSLADAGTHTHDHPY*QHESSR
Trigger: TCGACTGCTTTCATGCTGTCAGTAGGGATGATCATG...GGTGTGAGTCCCAGCATCAGCCAGGGAATCCGCCCCTAGCTTGTTCTTCGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370200.6
CDS-3UTR GCA 90 bp AATACAGAGTGGTATAAGATCTCGAGCTGGCCTCACCTATCTCTCTGCACTGAAGGATTCCCCGGGACCTaGGTGACCCTCTCCGGTGGG +
Preference number: 4 (lower is better)
Translates to: NTEWYKISSWPHLSLCTEGFPGT*VTLSGG
Trigger: CCCACCGGAGAGGGTCACGCAGGTCCCGGGGAATCC...TTCAGTGCAGAGAGATAGGTGAGGCCAGCTCGAGATCTTATACCACTCTGTATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370200.6
CDS-3UTR CCA 90 bp AACAAGCTAGATAAACGTTGGGGACCAGGAAATAGCAAGAACCAGGGCCTGGGACTGGGACGCACAGCCTaGATCTGCAGCCAGCCAGTC +
Preference number: 4 (lower is better)
Translates to: NKLDKRWGPGNSKNQGLGLGRTA*ICSQPV
Trigger: GACTGGCTGGCTGCAGATCCAGGCTGTGCGTCCCAG...TCCCAGGCCCTGGTTCTTGCTATTTCCTGGTCCCCAACGTTTATCTAGCTTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370200.6
CDS-3UTR CCA 90 bp GACAGGTCACAATTGGGGCAGATAGGAAACAGCCTTACCATGACTCTGGCTTCTCCAGGCTCCCTGCGTTaGGCCCCAGAGGACAAACTC +
Preference number: 4 (lower is better)
Translates to: DRSQLGQIGNSLTMTLASPGSLR*APEDKL
Trigger: GAGTTTGTCCTCTGGGGCCCAACGCAGGGAGCCTGG...AGAAGCCAGAGTCATGGTAAGGCTGTTTCCTATCTGCCCCAATTGTGACCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370200.6
CDS-3UTR TCA 90 bp CTCCTAGGGCCGCCCGCTTCCAGCCTGGGTTCGGCAATAAAAACTGTCGCTGGCAAAAGTTCTGGAAGATaGGTTTGGGGAAAGGGCAAA +
Preference number: 4 (lower is better)
Translates to: LLGPPASSLGSAIKTVAGKSSGR*VWGKGK
Trigger: TTTGCCCTTTCCCCAAACTCATCTTCCAGAACTTTT...GCCAGCGACAGTTTTTATTGCCGAACCCAGGCTGGAAGCGGGCGGCCCTAGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370200.6
CDS-3UTR GCA 90 bp GACAGGTCACAATTGGGGCAGATAGGAAACAGCCTTACCATGACTCTGGCTTCTCCGCAGAGCGGACTCTaGGAACGACAGGCACACAGA +
Preference number: 4 (lower is better)
Translates to: DRSQLGQIGNSLTMTLASPQSGL*ERQAHR
Trigger: TCTGTGTGCCTGTCGTTCGCAGAGTCCGCTCTGCGG...AGAAGCCAGAGTCATGGTAAGGCTGTTTCCTATCTGCCCCAATTGTGACCTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370200.6
CDS-3UTR CCA 90 bp CTCCAGCTTTTGTCTCTATCCTACCACACTGCTACCTTGGAGTCAAATAGGCCTGTGGGGGTCATCCCCTaGCAGCTGGATGTCCAAGCC +
Preference number: 4 (lower is better)
Translates to: LQLLSLSYHTATLESNRPVGVIP*QLDVQA
Trigger: GGCTTGGACATCCAGCTGCCAGGGGATGACCCCCAC...AGGCCTATTTGACTCCAAGGTAGCAGTGTGGTAGGATAGAGACAAAAGCTGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370200.6
CDS-3UTR CCA 90 bp CCCTCCTCTATCCAGTTTATGCTTTCATTTTGGGGGCCAACCCACATAGCCCTGAACTGCACAGAGATGTaGGGGTCATCCCCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: PSSIQFMLSFWGPTHIALNCTEM*GSSPGS
Trigger: GCTGCCAGGGGATGACCCCCACATCTCTGTGCAGTT...CAGGGCTATGTGGGTTGGCCCCCAAAATGAAAGCATAAACTGGATAGAGGAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000370200.6
CDS-3UTR CCA 90 bp TCTGGCTTCTGCAGGAAATGGGTAGATTCCTATGGGAGCTGGGGAAGGGTATGGAAGTGCCCTCATCACTaGGACGCACAGCCTGGATCT +
Preference number: 4 (lower is better)
Translates to: SGFCRKWVDSYGSWGRVWKCPHH*DAQPGS
Trigger: AGATCCAGGCTGTGCGTCCCAGTGATGAGGGCACTT...CCATACCCTTCCCCAGCTCCCATAGGAATCTACCCATTTCCTGCAGAAGCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370200.6
CDS-3UTR CCA 90 bp AGGGCCGCCCGCTTCCAGCCTGGGTTCGGCAATAAAAACTGTCGCTGGCTTAAGTATAAGATCTCGAGCTaGCCTCACCTATCTCTCTGC +
Preference number: 4 (lower is better)
Translates to: RAARFQPGFGNKNCRWLKYKISS*PHLSLC
Trigger: GCAGAGAGATAGGTGAGGCCAGCTCGAGATCTTATA...CTTAAGCCAGCGACAGTTTTTATTGCCGAACCCAGGCTGGAAGCGGGCGGCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370200.6
CDS-3UTR CCA 90 bp CCAAGCCAGAGAGGACAGGTCACAATTGGGGCAGATAGGAAACAGCCTTACCATCCCTGTTCCCCATTCTaGCCTGGGGAAGGGTTTGGA +
Preference number: 4 (lower is better)
Translates to: PSQRGQVTIGADRKQPYHPCSPF*PGEGFG
Trigger: TCCAAACCCTTCCCCAGGCCAGAATGGGGAACAGGG...ATGGTAAGGCTGTTTCCTATCTGCCCCAATTGTGACCTGTCCTCTCTGGCTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370200.6
CDS-3UTR CCA 90 bp CTCCAGCTTTTGTCTCTATCCTACCACACTGCTACCTTGGAGTCAAATAGGCCTCGGCCAAGCAGGACCTaGGGTTGGAGTTCCGGACCA +
Preference number: 4 (lower is better)
Translates to: LQLLSLSYHTATLESNRPRPSRT*GWSSGP
Trigger: TGGTCCGGAACTCCAACCCCAGGTCCTGCTTGGCCG...AGGCCTATTTGACTCCAAGGTAGCAGTGTGGTAGGATAGAGACAAAAGCTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370200.6
CDS-3UTR CCA 90 bp AGGGCCGCCCGCTTCCAGCCTGGGTTCGGCAATAAAAACTGTCGCTGGCTTAAGAATAAAAACTGTCGCTaGCTTAAGGACCCGGGGCAA +
Preference number: 4 (lower is better)
Translates to: RAARFQPGFGNKNCRWLKNKNCR*LKDPGQ
Trigger: TTGCCCCGGGTCCTTAAGCCAGCGACAGTTTTTATT...CTTAAGCCAGCGACAGTTTTTATTGCCGAACCCAGGCTGGAAGCGGGCGGCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000370200.6
CDS-3UTR CCA 90 bp CCAAGCCAGAGAGGACAGGTCACAATTGGGGCAGATAGGAAACAGCCTTACCATGTCTTGGAGCCCAGCTaGGCGAAGAACAAGCTAGGG +
Preference number: 4 (lower is better)
Translates to: PSQRGQVTIGADRKQPYHVLEPS*AKNKLG
Trigger: CCCTAGCTTGTTCTTCGCCCAGCTGGGCTCCAAGAC...ATGGTAAGGCTGTTTCCTATCTGCCCCAATTGTGACCTGTCCTCTCTGGCTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370200.6
CDS-3UTR CCA 90 bp AATACAGAGTGGTATAAGATCTCGAGCTGGCCTCACCTATCTCTCTGCACTGAACCGCAGAGGGCGTCTTaGAGCCCAGCTGGGCGAAGA +
Preference number: 4 (lower is better)
Translates to: NTEWYKISSWPHLSLCTEPQRAS*SPAGRR
Trigger: TCTTCGCCCAGCTGGGCTCCAAGACGCCCTCTGCGG...TTCAGTGCAGAGAGATAGGTGAGGCCAGCTCGAGATCTTATACCACTCTGTATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370200.6
CDS-3UTR CCA 90 bp ATACAGAGTGGTATAAGATCTCGAGCTGGCCTCACCTATCTCTCTGCACTGAACCGTGACCCTCTCCGGTaGGGTGGGGCTTTTGGTGAG +
Preference number: 4 (lower is better)
Translates to: IQSGIRSRAGLTYLSALNRDPLR*GGAFGE
Trigger: CTCACCAAAAGCCCCACCCCACCGGAGAGGGTCACG...GTTCAGTGCAGAGAGATAGGTGAGGCCAGCTCGAGATCTTATACCACTCTGTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370200.6
CDS-3UTR GCA 90 bp ATGAGCAAAGAAGCAGATAATGTATATCAGCCCCAATGGAGGGCAGACGGGGAACATTCCAGGCTGTGGTaGTTGAACCAGCAGGGCGGG +
Preference number: 4 (lower is better)
Translates to: MSKEADNVYQPQWRADGEHSRLW*LNQQGG
Trigger: CCCGCCCTGCTGGTTCAAGCACCACAGCCTGGAATG...TTCCCCGTCTGCCCTCCATTGGGGCTGATATACATTATCTGCTTCTTTGCTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370200.6
CDS-3UTR CCA 90 bp AAGAAGCAGATAATGTATATCAGCCCCAATGGAGGGCAGACGGGGAAGATAACTTCCAGGTCGCAGAGCTaGCCCTCGAGGTTGGCGCAT +
Preference number: 4 (lower is better)
Translates to: KKQIMYISPNGGQTGKITSRSQS*PSRLAH
Trigger: ATGCGCCAACCTCGAGGGCCAGCTCTGCGACCTGGA...AGTTATCTTCCCCGTCTGCCCTCCATTGGGGCTGATATACATTATCTGCTTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370200.6
CDS-3UTR TCA 90 bp GGGAGGGGGCGGTGGACAACAGTTCTCCCATTCCAGGCTGTGGTGCTTGAACCAGGGTTTGGAATAAGATaGGCAAAGAAGCAGATAATG +
Preference number: 4 (lower is better)
Translates to: GRGRWTTVLPFQAVVLEPGFGIR*AKKQIM
Trigger: CATTATCTGCTTCTTTGCTCATCTTATTCCAAACCC...TGGTTCAAGCACCACAGCCTGGAATGGGAGAACTGTTGTCCACCGCCCCCTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370200.6
CDS-3UTR GCA 90 bp ATGAGCAAAGAAGCAGATAATGTATATCAGCCCCAATGGAGGGCAGACGGGGAACAAGGCAGCGGTAAGTaGCCTCATCACTGGGACGCA +
Preference number: 4 (lower is better)
Translates to: MSKEADNVYQPQWRADGEQGSGK*PHHWDA
Trigger: TGCGTCCCAGTGATGAGGGCACTTACCGCTGCCTTG...TTCCCCGTCTGCCCTCCATTGGGGCTGATATACATTATCTGCTTCTTTGCTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370200.6
CDS-3UTR GCA 90 bp ATGAGCAAAGAAGCAGATAATGTATATCAGCCCCAATGGAGGGCAGACGGGGAACATCTGGCAGGCATGTaGTTAGAGAGCAGGCCCTGC +
Preference number: 4 (lower is better)
Translates to: MSKEADNVYQPQWRADGEHLAGM*LESRPC
Trigger: GCAGGGCCTGCTCTCTAAGCACATGCCTGCCAGATG...TTCCCCGTCTGCCCTCCATTGGGGCTGATATACATTATCTGCTTCTTTGCTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370200.6
CDS-3UTR CCA 90 bp AAGCAGATAATGTATATCAGCCCCAATGGAGGGCAGACGGGGAAGATAACTTCCGTACCCCACCGGTCCTaGTCTCAGCTTCTCTCCCTA +
Preference number: 4 (lower is better)
Translates to: KQIMYISPNGGQTGKITSVPHRS*SQLLSL
Trigger: TAGGGAGAGAAGCTGAGACCAGGACCGGTGGGGTAC...GGAAGTTATCTTCCCCGTCTGCCCTCCATTGGGGCTGATATACATTATCTGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370200.6
CDS-3UTR CCA 90 bp AACAAGCTAGATAAACGTTGGGGACCAGGAAATAGCAAGAACCAGGGCCTGGGACAGGGCTGGAAGAAGTaGAGAATCCTGGTGCCTGCA +
Preference number: 4 (lower is better)
Translates to: NKLDKRWGPGNSKNQGLGQGWKK*RILVPA
Trigger: TGCAGGCACCAGGATTCTCCACTTCTTCCAGCCCTG...TCCCAGGCCCTGGTTCTTGCTATTTCCTGGTCCCCAACGTTTATCTAGCTTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370200.6
CDS-3UTR CCA 90 bp TCTGGCTTCTGCAGGAAATGGGTAGATTCCTATGGGAGCTGGGGAAGGGTATGGTTCCCCATTCTGGCCTaGGGAAGGGTTTGGAATAAG +
Preference number: 4 (lower is better)
Translates to: SGFCRKWVDSYGSWGRVWFPILA*GRVWNK
Trigger: CTTATTCCAAACCCTTCCCCAGGCCAGAATGGGGAA...CCATACCCTTCCCCAGCTCCCATAGGAATCTACCCATTTCCTGCAGAAGCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370200.6
CDS-3UTR CCA 90 bp GGGACCCTGCTCCCCTTTCCAGGTCTTTTCAAGAGCAGGGATGAACACTATAGCATGGGTAGATTCCTATaGGAGCTGGGGAAGGGTATG +
Preference number: 4 (lower is better)
Translates to: GTLLPFPGLFKSRDEHYSMGRFL*ELGKGM
Trigger: CATACCCTTCCCCAGCTCCCATAGGAATCTACCCAT...GCTATAGTGTTCATCCCTGCTCTTGAAAAGACCTGGAAAGGGGAGCAGGGTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370200.6
CDS-3UTR TCA 90 bp ATGAGCAAAGAAGCAGATAATGTATATCAGCCCCAATGGAGGGCAGACGGGGAACATGAAAGCAGTCGATaGAGGGACCCTGCTCCCCTT +
Preference number: 4 (lower is better)
Translates to: MSKEADNVYQPQWRADGEHESSR*RDPAPL
Trigger: AAGGGGAGCAGGGTCCCTTCATCGACTGCTTTCATG...TTCCCCGTCTGCCCTCCATTGGGGCTGATATACATTATCTGCTTCTTTGCTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370200.6
CDS-3UTR CCA 90 bp CTCCAGCTTTTGTCTCTATCCTACCACACTGCTACCTTGGAGTCAAATAGGCCTGCAAGAACCAGGGCCTaGGAGGAAGGGCAGTTAGAA +
Preference number: 4 (lower is better)
Translates to: LQLLSLSYHTATLESNRPARTRA*EEGQLE
Trigger: TTCTAACTGCCCTTCCTCCCAGGCCCTGGTTCTTGC...AGGCCTATTTGACTCCAAGGTAGCAGTGTGGTAGGATAGAGACAAAAGCTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370200.6
CDS-3UTR GCA 90 bp CTGCGCCCGCATTACTTTAATAATAAATCGCGTGTCACTTTCCAGCGACATTATCGCACAGCCTGGATCTaGAGCCAGCCAGTCACCTCA +
Preference number: 4 (lower is better)
Translates to: LRPHYFNNKSRVTFQRHYRTAWI*SQPVTS
Trigger: TGAGGTGACTGGCTGGCTGCAGATCCAGGCTGTGCG...ATAATGTCGCTGGAAAGTGACACGCGATTTATTATTAAAGTAATGCGGGCGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370200.6
3UTR CAA 72 bp ACTTCCACCCTCCTCTATCCAGTTTATGCTTTCATTTaGGGGGCCAACCCACATAGCCCTGTTCCCCATTCT +
Preference number: 4 (lower is better)
Translates to: TSTLLYPVYAFI*GANPHSPVPHS
Trigger: AGAATGGGGAACAGGGCTATGTGGGTTGGCCCCCAAAATGAAAGCATAAACTGGATAGAGGAGGGTGGAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370200.6
CDS-3UTR CCA 90 bp AAGAAGCAGATAATGTATATCAGCCCCAATGGAGGGCAGACGGGGAAGATAACTAGAAGTGGAGAATCCTaGTGCCTGCACCTCTGTGTC +
Preference number: 4 (lower is better)
Translates to: KKQIMYISPNGGQTGKITRSGES*CLHLCV
Trigger: GACACAGAGGTGCAGGCACCAGGATTCTCCACTTCT...AGTTATCTTCCCCGTCTGCCCTCCATTGGGGCTGATATACATTATCTGCTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370200.6
CDS-3UTR CCA 90 bp CCCTCCTCTATCCAGTTTATGCTTTCATTTTGGGGGCCAACCCACATAGCCCTGTTTATGCTTTCATTTTaGGGGCCAACCCACATAGCC +
Preference number: 4 (lower is better)
Translates to: PSSIQFMLSFWGPTHIALFMLSF*GPTHIA
Trigger: GGCTATGTGGGTTGGCCCCCAAAATGAAAGCATAAA...CAGGGCTATGTGGGTTGGCCCCCAAAATGAAAGCATAAACTGGATAGAGGAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000370200.6
CDS-3UTR CCA 90 bp ATGAGCAAAGAAGCAGATAATGTATATCAGCCCCAATGGAGGGCAGACGGGGAAGGCTTCTGCAGGAAATaGGTAGATTCCTATGGGAGC +
Preference number: 4 (lower is better)
Translates to: MSKEADNVYQPQWRADGEGFCRK*VDSYGS
Trigger: GCTCCCATAGGAATCTACCCATTTCCTGCAGAAGCC...TTCCCCGTCTGCCCTCCATTGGGGCTGATATACATTATCTGCTTCTTTGCTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370200.6
3UTR CAA 72 bp CTCCAGCTTTTGTCTCTATCCTACCACACTGCTACCTaGGAGTCAAATAGGCCTCCCATGATCATCCCTACT +
Preference number: 4 (lower is better)
Translates to: LQLLSLSYHTAT*ESNRPPMIIPT
Trigger: AGTAGGGATGATCATGGGAGGCCTATTTGACTCCAAGGTAGCAGTGTGGTAGGATAGAGACAAAAGCTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370200.6
3UTR CAA 72 bp TGCACTGAACTAAGTCATGCTCCGCTGTTCTCTCTCTaGTACAAAAGACGGCAGACAGCAAAAGGGACTGCA +
Preference number: 4 (lower is better)
Translates to: CTELSHAPLFSL*YKRRQTAKGTA
Trigger: TGCAGTCCCTTTTGCTGTCTGCCGTCTTTTGTACAAGAGAGAGAACAGCGGAGCATGACTTAGTTCAGTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370200.6
CDS-3UTR TCA 90 bp AAGAAGCAGATAATGTATATCAGCCCCAATGGAGGGCAGACGGGGAAGATAACTCCTATCTCTCTGCACTaGACTAAGTCATGCTCCGCT +
Preference number: 4 (lower is better)
Translates to: KKQIMYISPNGGQTGKITPISLH*TKSCSA
Trigger: AGCGGAGCATGACTTAGTTCAGTGCAGAGAGATAGG...AGTTATCTTCCCCGTCTGCCCTCCATTGGGGCTGATATACATTATCTGCTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370200.6
CDS-3UTR GCA 90 bp CTCCAGCTTTTGTCTCTATCCTACCACACTGCTACCTTGGAGTCAAATAGGCCTCATGACTCTGGCTTCTaGAGGAAATGGGTAGATTCC +
Preference number: 4 (lower is better)
Translates to: LQLLSLSYHTATLESNRPHDSGF*RKWVDS
Trigger: GGAATCTACCCATTTCCTGCAGAAGCCAGAGTCATG...AGGCCTATTTGACTCCAAGGTAGCAGTGTGGTAGGATAGAGACAAAAGCTGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370200.6
CDS-3UTR GCA 90 bp CTCTATCCAGTTTATGCTTTCATTTTGGGGGCCAACCCACATAGCCCTGTTCCCTTTCATGTGCACATCTaGATAAACTGTCTGTGCATC +
Preference number: 4 (lower is better)
Translates to: LYPVYAFILGANPHSPVPFHVHI*INCLCI
Trigger: GATGCACAGACAGTTTATGCAGATGTGCACATGAAA...GGGAACAGGGCTATGTGGGTTGGCCCCCAAAATGAAAGCATAAACTGGATAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370200.6
CDS-3UTR CCA 90 bp ATACAGAGTGGTATAAGATCTCGAGCTGGCCTCACCTATCTCTCTGCACTGAACAAGCTAGATAAACGTTaGGGACCAGGAAATAGCAAG +
Preference number: 4 (lower is better)
Translates to: IQSGIRSRAGLTYLSALNKLDKR*GPGNSK
Trigger: CTTGCTATTTCCTGGTCCCCAACGTTTATCTAGCTT...GTTCAGTGCAGAGAGATAGGTGAGGCCAGCTCGAGATCTTATACCACTCTGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370200.6
CDS-3UTR TCA 90 bp ATACAGAGTGGTATAAGATCTCGAGCTGGCCTCACCTATCTCTCTGCACTGAACTCATTAAATAAACATTaGGTCTCACCAGTGTCCCTG +
Preference number: 4 (lower is better)
Translates to: IQSGIRSRAGLTYLSALNSLNKH*VSPVSL
Trigger: CAGGGACACTGGTGAGACTCAATGTTTATTTAATGA...GTTCAGTGCAGAGAGATAGGTGAGGCCAGCTCGAGATCTTATACCACTCTGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370200.6
CDS-3UTR CCA 90 bp AAGAAGCAGATAATGTATATCAGCCCCAATGGAGGGCAGACGGGGAAGATAACTTTGTCCAATACAGAGTaGTATAAGATCTCGAGCTGG +
Preference number: 4 (lower is better)
Translates to: KKQIMYISPNGGQTGKITLSNTE*YKISSW
Trigger: CCAGCTCGAGATCTTATACCACTCTGTATTGGACAA...AGTTATCTTCCCCGTCTGCCCTCCATTGGGGCTGATATACATTATCTGCTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370200.6
CDS-3UTR GCA 90 bp CTGCGCCCGCATTACTTTAATAATAAATCGCGTGTCACTTTCCAGCGACATTATGGCCTCGCTGACTTATaGTTTCATTCTTTCCTCCAA +
Preference number: 4 (lower is better)
Translates to: LRPHYFNNKSRVTFQRHYGLADL*FHSFLQ
Trigger: TTGGAGGAAAGAATGAAAGCATAAGTCAGCGAGGCC...ATAATGTCGCTGGAAAGTGACACGCGATTTATTATTAAAGTAATGCGGGCGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370200.6
CDS CCA 90 bp GCACAGGCAGCGCCAAGGCAGCTGCGGGCCGCGGCGGCGGCAGCATaGTTAGCGGGAAGCCCTGCGAGCACTCGGGGCATCAGCGCGTTC +
Preference number: 5 (lower is better)
Translates to: AQAAPRQLRAAAAAA*LAGSPASTRGISAF
Trigger: GAACGCGCTGATGCCCCGAGTGCTCGCAGGGCTTCCCGCTAACCATGCTGCCGCCGCCGCGGCCCGCAGCTGCCTTGGCGCTGCCTGTGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370200.6
CDS GCA 90 bp ATGGCCCAGCAAAGGCATCCAGTCCGATTCGCAGGGCCCCGGGTGTaGCACAGTGAGGTTGGCATCGGGCCGAGCGCGGGCCGCCTCCTG +
Preference number: 5 (lower is better)
Translates to: MAQQRHPVRFAGPRV*HSEVGIGPSAGRLL
Trigger: CAGGAGGCGGCCCGCGCTCGGCCCGATGCCAACCTCACTGTGGCACACCCGGGGCCCTGCGAATCGGACTGGATGCCTTTGCTGGGCCAT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470106.1
CDS CCA 90 bp AGAAGTGAGCACTGGGGTCCAGGTCGCAGAGCTGGCCCTCGAGGTTaGCGCATTCCCAGCAGCAGCCGCACGCGTCGCGCACCCTGCCCG +
Preference number: 5 (lower is better)
Translates to: RSEHWGPGRRAGPRG*RIPSSSRTRRAPCP
Trigger: CGGGCAGGGTGCGCGACGCGTGCGGCTGCTGCTGGGAATGCGCCAACCTCGAGGGCCAGCTCTGCGACCTGGACCCCAGTGCTCACTTCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370200.6
CDS CCA 90 bp GCCGGCACTCAAGCTGCTCGCCGCAGTGCCCGTAGAAGTGAGCACTaGGGTCCAGGTCGCAGAGCTGGCCCTCGAGGTTGGCGCATTCCC +
Preference number: 5 (lower is better)
Translates to: AGTQAARRSARRSEH*GPGRRAGPRGWRIP
Trigger: GGGAATGCGCCAACCTCGAGGGCCAGCTCTGCGACCTGGACCCCAGTGCTCACTTCTACGGGCACTGCGGCGAGCAGCTTGAGTGCCGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370200.6
CDS CCA 90 bp CAGCCCGGCTCAGCTAAAAGCAGGGAGAAGAGCCCGGCCGAGACCTaGAAGCCTCGGCTTGGGAGGAGCTGGTCCGACGGACCCTTCCTG +
Preference number: 5 (lower is better)
Translates to: QPGSAKSREKSPAET*KPRLGRSWSDGPFL
Trigger: CAGGAAGGGTCCGTCGGACCAGCTCCTCCCAAGCCGAGGCTTCCAGGTCTCGGCCGGGCTCTTCTCCCTGCTTTTAGCTGAGCCGGGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465807.1
ENST00000477267.1
CDS-3UTR CAA 90 bp CCTACCCCTCTGATTCTGCTTCTGTGGGCGCCCTGGAATCGGCTCCCGGTATCCCCCGCAGAGGGCGTCTaGGAGCCCAGCTGGGCGAAG +
Preference number: 5 (lower is better)
Translates to: PTPLILLLWAPWNRLPVSPAEGV*EPSWAK
Trigger: CTTCGCCCAGCTGGGCTCCAAGACGCCCTCTGCGGG...GGATACCGGGAGCCGATTCCAGGGCGCCCACAGAAGCAGAATCAGAGGGGTAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370200.6
CDS-3UTR CAA 90 bp CGCTGTTGTGCGCGGCTCCTAGGGCCGCCCGCTTCCAGCCTGGGTTCGGCAATAGGTGGGGTGGGGCTTTaGGTGAGGAGCCTCTGCTCT +
Preference number: 5 (lower is better)
Translates to: RCCARLLGPPASSLGSAIGGVGL*VRSLCS
Trigger: AGAGCAGAGGCTCCTCACCAAAAGCCCCACCCCACC...TATTGCCGAACCCAGGCTGGAAGCGGGCGGCCCTAGGAGCCGCGCACAACAGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370200.6
CDS TCA 90 bp GTTATACCAGCACGGCTGCGCAACACTTCTTTGGAGCCTTCGCGGTaGCGAGCAGCCGGGCGAAGCGGCCCTCCTCCTCACGACAGCCCG +
Preference number: 5 (lower is better)
Translates to: VIPARLRNTSLEPSR*RAAGRSGPPPHDSP
Trigger: CGGGCTGTCGTGAGGAGGAGGGCCGCTTCGCCCGGCTGCTCGTCACCGCGAAGGCTCCAAAGAAGTGTTGCGCAGCCGTGCTGGTATAAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465807.1
ENST00000477267.1
CDS GCA 90 bp GGGCCTCCACTTGACCCAGGGCATTGCGGCCAAGGCAGCGGTAAGTaGCCTCATCACTGGGACGCACAGCCTGGATCTGCAGCCAGCCAG +
Preference number: 5 (lower is better)
Translates to: GPPLDPGHCGQGSGK*PHHWDAQPGSAASQ
Trigger: CTGGCTGGCTGCAGATCCAGGCTGTGCGTCCCAGTGATGAGGGCACTTACCGCTGCCTTGGCCGCAATGCCCTGGGTCAAGTGGAGGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370200.6
ENST00000477267.1
ENST00000477979.5
CDS GCA 90 bp AGGGGCTGGGCTTCGCCAGGACACCCTCAGTTATACCAGCACGGCTaGGCAACACTTCTTTGGAGCCTTCGCGGTGACGAGCAGCCGGGC +
Preference number: 5 (lower is better)
Translates to: RGWASPGHPQLYQHG*ATLLWSLRGDEQPG
Trigger: GCCCGGCTGCTCGTCACCGCGAAGGCTCCAAAGAAGTGTTGCGCAGCCGTGCTGGTATAACTGAGGGTGTCCTGGCGAAGCCCAGCCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465807.1
ENST00000477267.1
CDS CCA 90 bp TGTAGGGTGCGACTGAGCCTCTCCCGCCTTCAGGCCTGGCAACTCTaGGTCGGCGCTCCTGGAACCTCACATCTCGGGTGTGAGCAACCC +
Preference number: 5 (lower is better)
Translates to: CRVRLSLSRLQAWQL*VGAPGTSHLGCEQP
Trigger: GGGTTGCTCACACCCGAGATGTGAGGTTCCAGGAGCGCCGACCCAGAGTTGCCAGGCCTGAAGGCGGGAGAGGCTCAGTCGCACCCTACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465807.1
ENST00000477267.1
CDS CCA 90 bp CCAGGACACCCTCAGTTATACCAGCACGGCTGCGCAACACTTCTTTaGAGCCTTCGCGGTGACGAGCAGCCGGGCGAAGCGGCCCTCCTC +
Preference number: 5 (lower is better)
Translates to: PGHPQLYQHGCATLL*SLRGDEQPGEAALL
Trigger: GAGGAGGGCCGCTTCGCCCGGCTGCTCGTCACCGCGAAGGCTCCAAAGAAGTGTTGCGCAGCCGTGCTGGTATAACTGAGGGTGTCCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465807.1
ENST00000477267.1
CDS-3UTR CAA 90 bp CCCTCTTTCAGCGCCGGGCGGATTTTGGCCACAGCGCCGAACAGCACGCCCCACCTGGGAAACAACCTGTaGGAGGTCCTACTGGCCAGG +
Preference number: 5 (lower is better)
Translates to: PSFSAGRILATAPNSTPHLGNNL*EVLLAR
Trigger: CCTGGCCAGTAGGACCTCCAACAGGTTGTTTCCCAG...GTGGGGCGTGCTGTTCGGCGCTGTGGCCAAAATCCGCCCGGCGCTGAAAGAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370200.6
CDS-3UTR CAA 90 bp CTCCTAGGGCCGCCCGCTTCCAGCCTGGGTTCGGCAATAAAAACTGTCGCTGGCTCCAGGCTGTGGTGCTaGAACCAGCAGGGCGGGGAG +
Preference number: 5 (lower is better)
Translates to: LLGPPASSLGSAIKTVAGSRLWC*NQQGGE
Trigger: CTCCCCGCCCTGCTGGTTCAAGCACCACAGCCTGGA...GCCAGCGACAGTTTTTATTGCCGAACCCAGGCTGGAAGCGGGCGGCCCTAGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370200.6
CDS CCA 90 bp GGTGGGAAATGTAGGGTGCGACTGAGCCTCTCCCGCCTTCAGGCCTaGCAACTCTGGGTCGGCGCTCCTGGAACCTCACATCTCGGGTGT +
Preference number: 5 (lower is better)
Translates to: GGKCRVRLSLSRLQA*QLWVGAPGTSHLGC
Trigger: ACACCCGAGATGTGAGGTTCCAGGAGCGCCGACCCAGAGTTGCCAGGCCTGAAGGCGGGAGAGGCTCAGTCGCACCCTACATTTCCCACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465807.1
ENST00000477267.1
CDS-3UTR CAA 90 bp TCCGGACCACACCCCTCCCATGTGGCCAGGCTCCCTGCGTTGGGCCCCAGAGGATACCACACTGCTACCTaGGAGTCAAATAGGCCTCCC +
Preference number: 5 (lower is better)
Translates to: SGPHPSHVARLPALGPRGYHTAT*ESNRPP
Trigger: GGGAGGCCTATTTGACTCCAAGGTAGCAGTGTGGTA...TCCTCTGGGGCCCAACGCAGGGAGCCTGGCCACATGGGAGGGGTGTGGTCCGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370200.6
CDS TCA 90 bp CCCTCTCTGAGTCGGGTTCATCTCTCGGGCTTCCAGGCTTCTTTTTaGGGGGCGCTCTCCAGCTTCGGGCTCCAGTTCTGCCCAGTCCGC +
Preference number: 5 (lower is better)
Translates to: PSLSRVHLSGFQASF*GALSSFGLQFCPVR
Trigger: GCGGACTGGGCAGAACTGGAGCCCGAAGCTGGAGAGCGCCCCTCAAAAAGAAGCCTGGAAGCCCGAGAGATGAACCCGACTCAGAGAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000465807.1
ENST00000477267.1
CDS CCA 90 bp CACCAGCGTGGTGAGGGTGTCCTCGGTCCCCAAGGTCTGCAGTCTTaGCCCTCTCTGAGTCGGGTTCATCTCTCGGGCTTCCAGGCTTCT +
Preference number: 5 (lower is better)
Translates to: HQRGEGVLGPQGLQS*PSLSRVHLSGFQAS
Trigger: AGAAGCCTGGAAGCCCGAGAGATGAACCCGACTCAGAGAGGGCCAAGACTGCAGACCTTGGGGACCGAGGACACCCTCACCACGCTGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465807.1
CDS-3UTR CAA 90 bp CCGCTTGCGCTGTTGTGCGCGGCTCCTAGGGCCGCCCGCTTCCAGCCTGGGTTCGTTTATGCTTTCATTTaGGGGGCCAACCCACATAGC +
Preference number: 5 (lower is better)
Translates to: PLALLCAAPRAARFQPGFVYAFI*GANPHS
Trigger: GCTATGTGGGTTGGCCCCCAAAATGAAAGCATAAAC...GAACCCAGGCTGGAAGCGGGCGGCCCTAGGAGCCGCGCACAACAGCGCAAGCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370200.6
CDS-3UTR CAA 90 bp TCTGGCTTCTGCAGGAAATGGGTAGATTCCTATGGGAGCTGGGGAAGGGTATGGAGCCCGCTTGCGCTGTaGTGCGCGGCTCCTAGGGCC +
Preference number: 5 (lower is better)
Translates to: SGFCRKWVDSYGSWGRVWSPLAL*CAAPRA
Trigger: GGCCCTAGGAGCCGCGCACAACAGCGCAAGCGGGCT...CCATACCCTTCCCCAGCTCCCATAGGAATCTACCCATTTCCTGCAGAAGCCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370200.6
CDS CCA 90 bp AGACCCTTCGCAGCAGCCGTGATTCGAGTCCGAAAGAAAAGGTTATaGAAAGAAAGCAGAGGCGCAGTCAGCCGGGCCCGCCGGCCACCT +
Preference number: 5 (lower is better)
Translates to: RPFAAAVIRVRKKRL*KESRGAVSRARRPP
Trigger: AGGTGGCCGGCGGGCCCGGCTGACTGCGCCTCTGCTTTCTTTCCATAACCTTTTCTTTCGGACTCGAATCACGGCTGCTGCGAAGGGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370200.6
ENST00000477979.5
CDS-3UTR CAA 90 bp CCCTCCTCTATCCAGTTTATGCTTTCATTTTGGGGGCCAACCCACATAGCCCTGAGCAGGGGCCTCCACTaGACCCAGGGCATTGCGGCC +
Preference number: 5 (lower is better)
Translates to: PSSIQFMLSFWGPTHIALSRGLH*TQGIAA
Trigger: GGCCGCAATGCCCTGGGTCAAGTGGAGGCCCCTGCT...CAGGGCTATGTGGGTTGGCCCCCAAAATGAAAGCATAAACTGGATAGAGGAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370200.6
CDS-3UTR CAA 90 bp GGGACCCTGCTCCCCTTTCCAGGTCTTTTCAAGAGCAGGGATGAACACTATAGCCCTGCATGGGCCCCTTaGTACCCCACCGGTCCTGGT +
Preference number: 5 (lower is better)
Translates to: GTLLPFPGLFKSRDEHYSPAWAP*YPTGPG
Trigger: ACCAGGACCGGTGGGGTACAAAGGGGCCCATGCAGG...GCTATAGTGTTCATCCCTGCTCTTGAAAAGACCTGGAAAGGGGAGCAGGGTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000370200.6
CDS-3UTR CAA 90 bp CCCTCCTCTATCCAGTTTATGCTTTCATTTTGGGGGCCAACCCACATAGCCCTGAGCGCCGGGCGGATTTaGGCCACAGCGCCGAACAGC +
Preference number: 5 (lower is better)
Translates to: PSSIQFMLSFWGPTHIALSAGRI*ATAPNS
Trigger: GCTGTTCGGCGCTGTGGCCAAAATCCGCCCGGCGCT...CAGGGCTATGTGGGTTGGCCCCCAAAATGAAAGCATAAACTGGATAGAGGAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370200.6
CDS-3UTR CAA 90 bp AACAAGCTAGATAAACGTTGGGGACCAGGAAATAGCAAGAACCAGGGCCTGGGATGTGCCACAGTGAGGTaGGCATCGGGCCGAGCGCGG +
Preference number: 5 (lower is better)
Translates to: NKLDKRWGPGNSKNQGLGCATVR*ASGRAR
Trigger: CCGCGCTCGGCCCGATGCCAACCTCACTGTGGCACA...TCCCAGGCCCTGGTTCTTGCTATTTCCTGGTCCCCAACGTTTATCTAGCTTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370200.6
CDS-3UTR CAA 90 bp CCTACCCCTCTGATTCTGCTTCTGTGGGCGCCCTGGAATCGGCTCCCGGTATCCCCGCTGTTCTCTCTCTaGTACAAAAGACGGCAGACA +
Preference number: 5 (lower is better)
Translates to: PTPLILLLWAPWNRLPVSPLFSL*YKRRQT
Trigger: TGTCTGCCGTCTTTTGTACAAGAGAGAGAACAGCGG...GGATACCGGGAGCCGATTCCAGGGCGCCCACAGAAGCAGAATCAGAGGGGTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370200.6
CDS-3UTR CAA 90 bp CTCTATCCAGTTTATGCTTTCATTTTGGGGGCCAACCCACATAGCCCTGTTCCCCGGTATCCAGCCCGCTaGCGCTGTTGTGCGCGGCTC +
Preference number: 5 (lower is better)
Translates to: LYPVYAFILGANPHSPVPRYPAR*RCCARL
Trigger: GAGCCGCGCACAACAGCGCAAGCGGGCTGGATACCG...GGGAACAGGGCTATGTGGGTTGGCCCCCAAAATGAAAGCATAAACTGGATAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370200.6
CDS CCA 90 bp GCAGCTGGATGTCCAAGCCATCCTTCCTCCACTCGATGGAGGCCATaGGGTAGGCAAACACTTCACAGCCAAAGATCACATCCTGCCCTG +
Preference number: 5 (lower is better)
Translates to: AAGCPSHPSSTRWRP*GRQTLHSQRSHPAL
Trigger: CAGGGCAGGATGTGATCTTTGGCTGTGAAGTGTTTGCCTACCCCATGGCCTCCATCGAGTGGAGGAAGGATGGCTTGGACATCCAGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370200.6
ENST00000477267.1
ENST00000477979.5
CDS CCA 90 bp TCACTCTCAGCCTCCTCCTCAGGAACCAGGTTTAGTGATCGCAGCTaGGGGATGCCTGTAGAGTTCAGCTGGTCAGGTGTGAGCACTGTC +
Preference number: 5 (lower is better)
Translates to: SLSASSSGTRFSDRS*GMPVEFSWSGVSTV
Trigger: GACAGTGCTCACACCTGACCAGCTGAACTCTACAGGCATCCCCCAGCTGCGATCACTAAACCTGGTTCCTGAGGAGGAGGCTGAGAGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370200.6
ENST00000477267.1
ENST00000477979.5
CDS-3UTR CAA 90 bp GGGAGGGGGCGGTGGACAACAGTTCTCCCATTCCAGGCTGTGGTGCTTGAACCAAATGAGGAAAGAGATTaGGGGACCCCAAGCCAGAGA +
Preference number: 5 (lower is better)
Translates to: GRGRWTTVLPFQAVVLEPNEERD*GTPSQR
Trigger: TCTCTGGCTTGGGGTCCCCAAATCTCTTTCCTCATT...TGGTTCAAGCACCACAGCCTGGAATGGGAGAACTGTTGTCCACCGCCCCCTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370200.6
CDS CCA 90 bp CATCCCCTGGCAGCTGGATGTCCAAGCCATCCTTCCTCCACTCGATaGAGGCCATGGGGTAGGCAAACACTTCACAGCCAAAGATCACAT +
Preference number: 5 (lower is better)
Translates to: HPLAAGCPSHPSSTR*RPWGRQTLHSQRSH
Trigger: ATGTGATCTTTGGCTGTGAAGTGTTTGCCTACCCCATGGCCTCCATCGAGTGGAGGAAGGATGGCTTGGACATCCAGCTGCCAGGGGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370200.6
ENST00000477267.1
ENST00000477979.5
CDS-3UTR CAA 90 bp CTCTATCCAGTTTATGCTTTCATTTTGGGGGCCAACCCACATAGCCCTGTTCCCAAGCAGGACCTGGGGTaGGAGTTCCGGACCACACCC +
Preference number: 5 (lower is better)
Translates to: LYPVYAFILGANPHSPVPKQDLG*EFRTTP
Trigger: GGGTGTGGTCCGGAACTCCAACCCCAGGTCCTGCTT...GGGAACAGGGCTATGTGGGTTGGCCCCCAAAATGAAAGCATAAACTGGATAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370200.6
CDS-3UTR CAA 90 bp AATACAGAGTGGTATAAGATCTCGAGCTGGCCTCACCTATCTCTCTGCACTGAAGCCAGGCTCCCTGCGTaGGGCCCCAGAGGACAAACT +
Preference number: 5 (lower is better)
Translates to: NTEWYKISSWPHLSLCTEARLPA*GPRGQT
Trigger: AGTTTGTCCTCTGGGGCCCAACGCAGGGAGCCTGGC...TTCAGTGCAGAGAGATAGGTGAGGCCAGCTCGAGATCTTATACCACTCTGTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370200.6
CDS GCA 90 bp GATCCACCAGATGGCACTCCTTCGCTACTTCCTGTACTCCCAACTTaGCAGAGATGTCGCCTCTTTCCGCTAAGGCACAAAACTTGCAGA +
Preference number: 5 (lower is better)
Translates to: DPPDGTPSLLPVLPT*QRCRLFPLRHKTCR
Trigger: TCTGCAAGTTTTGTGCCTTAGCGGAAAGAGGCGACATCTCTGGCAAGTTGGGAGTACAGGAAGTAGCGAAGGAGTGCCATCTGGTGGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465807.1
CDS CCA 90 bp TTTTCAAGAGCAGGGATGAACACTATAGCCGCTCACCCACCCCCATaGGCCAGAGCTCTGGACCTAGTAGTAATCGTCATTCTCTTCACT +
Preference number: 5 (lower is better)
Translates to: FSRAGMNTIAAHPPP*ARALDLVVIVILFT
Trigger: AGTGAAGAGAATGACGATTACTACTAGGTCCAGAGCTCTGGCCCATGGGGGTGGGTGAGCGGCTATAGTGTTCATCCCTGCTCTTGAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370200.6
ENST00000477979.5
CDS-3UTR CAA 90 bp CTCTATCCAGTTTATGCTTTCATTTTGGGGGCCAACCCACATAGCCCTGTTCCCGAGGACAGGTCACAATaGGGGCAGATAGGAAACAGC +
Preference number: 5 (lower is better)
Translates to: LYPVYAFILGANPHSPVPEDRSQ*GQIGNS
Trigger: GCTGTTTCCTATCTGCCCCAATTGTGACCTGTCCTC...GGGAACAGGGCTATGTGGGTTGGCCCCCAAAATGAAAGCATAAACTGGATAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370200.6
CDS-3UTR CAA 90 bp GGGACCCTGCTCCCCTTTCCAGGTCTTTTCAAGAGCAGGGATGAACACTATAGCGTTCAAACTTTCTCTTaGTACATCTGGCAGGCATGT +
Preference number: 5 (lower is better)
Translates to: GTLLPFPGLFKSRDEHYSVQTFS*YIWQAC
Trigger: ACATGCCTGCCAGATGTACAAAGAGAAAGTTTGAAC...GCTATAGTGTTCATCCCTGCTCTTGAAAAGACCTGGAAAGGGGAGCAGGGTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370200.6
CDS GCA 72 bp GGCCGCGGCGGCGGCAGCATGGTTAGCGGGAAGCCCTaGGAGCACTCGGGGCATCAGCGCGTTCGGGCACCC +
Preference number: 6 (lower is better)
Translates to: GRGGGSMVSGKP*EHSGHQRVRAP
Trigger: GGGTGCCCGAACGCGCTGATGCCCCGAGTGCTCGCAGGGCTTCCCGCTAACCATGCTGCCGCCGCCGCGGCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370200.6
CDS CCA 72 bp GCGCCAAGGCAGCTGCGGGCCGCGGCGGCGGCAGCATaGTTAGCGGGAAGCCCTGCGAGCACTCGGGGCATC +
Preference number: 6 (lower is better)
Translates to: APRQLRAAAAAA*LAGSPASTRGI
Trigger: GATGCCCCGAGTGCTCGCAGGGCTTCCCGCTAACCATGCTGCCGCCGCCGCGGCCCGCAGCTGCCTTGGCGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370200.6
CDS CCA 72 bp CAGCCGCATCCAGCCGCGCCGCAGGTAATCTGGGCCTaGGGATGGCCTTGCGCCGGTCGGGGGCGGCGTCAG +
Preference number: 6 (lower is better)
Translates to: QPHPAAPQVIWA*GWPCAGRGRRQ
Trigger: CTGACGCCGCCCCCGACCGGCGCAAGGCCATCCCCAGGCCCAGATTACCTGCGGCGCGGCTGGATGCGGCTG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370200.6
CDS CAA 72 bp CCCGATTCGCAGGGCCCCGGGTGTGCCACAGTGAGGTaGGCATCGGGCCGAGCGCGGGCCGCCTCCTGCAGG +
Preference number: 6 (lower is better)
Translates to: PDSQGPGCATVR*ASGRARAASCR
Trigger: CCTGCAGGAGGCGGCCCGCGCTCGGCCCGATGCCAACCTCACTGTGGCACACCCGGGGCCCTGCGAATCGGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370200.6
CDS CAA 72 bp TCCGATTCGCAGGGCCCCGGGTGTGCCACAGTGAGGTaGGCATCGGGCCGAGCGCGGGCCGCCTCCTGCAGG +
Preference number: 6 (lower is better)
Translates to: SDSQGPGCATVR*ASGRARAASCR
Trigger: CCTGCAGGAGGCGGCCCGCGCTCGGCCCGATGCCAACCTCACTGTGGCACACCCGGGGCCCTGCGAATCGGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470106.1
CDS TCA 72 bp TCCAGTCCGATTCGCAGGGCCCCGGGTGTGCCACAGTaGGGTTGGCATCGGGCCGAGCGCGGGCCGCCTCCT +
Preference number: 6 (lower is better)
Translates to: SSPIRRAPGVPQ*GWHRAERGPPP
Trigger: AGGAGGCGGCCCGCGCTCGGCCCGATGCCAACCTCACTGTGGCACACCCGGGGCCCTGCGAATCGGACTGGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470106.1
CDS CCA 72 bp CACTGGGGTCCAGGTCGCAGAGCTGGCCCTCGAGGTTaGCGCATTCCCAGCAGCAGCCGCACGCGTCGCGCA +
Preference number: 6 (lower is better)
Translates to: HWGPGRRAGPRG*RIPSSSRTRRA
Trigger: TGCGCGACGCGTGCGGCTGCTGCTGGGAATGCGCCAACCTCGAGGGCCAGCTCTGCGACCTGGACCCCAGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370200.6
CDS CCA 72 bp CCGGCCGAGACCTGGAAGCCTCGGCTTGGGAGGAGCTaGTCCGACGGACCCTTCCTGCCCCGGTTTGTCCGG +
Preference number: 6 (lower is better)
Translates to: PAETWKPRLGRS*SDGPFLPRFVR
Trigger: CCGGACAAACCGGGGCAGGAAGGGTCCGTCGGACCAGCTCCTCCCAAGCCGAGGCTTCCAGGTCTCGGCCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465807.1
ENST00000477267.1
CDS CCA 72 bp GGAGAAGAGCCCGGCCGAGACCTGGAAGCCTCGGCTTaGGAGGAGCTGGTCCGACGGACCCTTCCTGCCCCG +
Preference number: 6 (lower is better)
Translates to: GEEPGRDLEASA*EELVRRTLPAP
Trigger: CGGGGCAGGAAGGGTCCGTCGGACCAGCTCCTCCCAAGCCGAGGCTTCCAGGTCTCGGCCGGGCTCTTCTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465807.1
ENST00000477267.1
CDS GCA 72 bp CAAAGGCATCCAGTCCGATTCGCAGGGCCCCGGGTGTaGCACAGTGAGGTTGGCATCGGGCCGAGCGCGGGC +
Preference number: 6 (lower is better)
Translates to: QRHPVRFAGPRV*HSEVGIGPSAG
Trigger: GCCCGCGCTCGGCCCGATGCCAACCTCACTGTGGCACACCCGGGGCCCTGCGAATCGGACTGGATGCCTTTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470106.1
CDS TCA 72 bp GCACGGCTGCGCAACACTTCTTTGGAGCCTTCGCGGTaGCGAGCAGCCGGGCGAAGCGGCCCTCCTCCTCAC +
Preference number: 6 (lower is better)
Translates to: ARLRNTSLEPSR*RAAGRSGPPPH
Trigger: GTGAGGAGGAGGGCCGCTTCGCCCGGCTGCTCGTCACCGCGAAGGCTCCAAAGAAGTGTTGCGCAGCCGTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465807.1
ENST00000477267.1
CDS CCA 72 bp CAAGCTGCTCGCCGCAGTGCCCGTAGAAGTGAGCACTaGGGTCCAGGTCGCAGAGCTGGCCCTCGAGGTTGG +
Preference number: 6 (lower is better)
Translates to: QAARRSARRSEH*GPGRRAGPRGW
Trigger: CCAACCTCGAGGGCCAGCTCTGCGACCTGGACCCCAGTGCTCACTTCTACGGGCACTGCGGCGAGCAGCTTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370200.6
CDS CCA 72 bp CGACTGAGCCTCTCCCGCCTTCAGGCCTGGCAACTCTaGGTCGGCGCTCCTGGAACCTCACATCTCGGGTGT +
Preference number: 6 (lower is better)
Translates to: RLSLSRLQAWQL*VGAPGTSHLGC
Trigger: ACACCCGAGATGTGAGGTTCCAGGAGCGCCGACCCAGAGTTGCCAGGCCTGAAGGCGGGAGAGGCTCAGTCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465807.1
ENST00000477267.1
CDS CCA 72 bp TGTAGGGTGCGACTGAGCCTCTCCCGCCTTCAGGCCTaGCAACTCTGGGTCGGCGCTCCTGGAACCTCACAT +
Preference number: 6 (lower is better)
Translates to: CRVRLSLSRLQA*QLWVGAPGTSH
Trigger: ATGTGAGGTTCCAGGAGCGCCGACCCAGAGTTGCCAGGCCTGAAGGCGGGAGAGGCTCAGTCGCACCCTACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465807.1
ENST00000477267.1
CDS CAA 90 bp CAGCTGGTCAGGTGTGAGCACTGTCAAGCTAGCAGGGGCCTCCACTaGACCCAGGGCATTGCGGCCAAGGCAGCGGTAAGTGCCCTCATC +
Preference number: 6 (lower is better)
Translates to: QLVRCEHCQASRGLH*TQGIAAKAAVSALI
Trigger: GATGAGGGCACTTACCGCTGCCTTGGCCGCAATGCCCTGGGTCAAGTGGAGGCCCCTGCTAGCTTGACAGTGCTCACACCTGACCAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370200.6
ENST00000477267.1
ENST00000477979.5
CDS CAA 90 bp GCCCTCTCTGAGTCGGGTTCATCTCTCGGGCTTCCAGGCTTCTTTTaGAGGGGCGCTCTCCAGCTTCGGGCTCCAGTTCTGCCCAGTCCG +
Preference number: 6 (lower is better)
Translates to: ALSESGSSLGLPGFF*RGALQLRAPVLPSP
Trigger: CGGACTGGGCAGAACTGGAGCCCGAAGCTGGAGAGCGCCCCTCAAAAAGAAGCCTGGAAGCCCGAGAGATGAACCCGACTCAGAGAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465807.1
ENST00000477267.1
CDS GCA 72 bp CTTGACCCAGGGCATTGCGGCCAAGGCAGCGGTAAGTaGCCTCATCACTGGGACGCACAGCCTGGATCTGCA +
Preference number: 6 (lower is better)
Translates to: LDPGHCGQGSGK*PHHWDAQPGSA
Trigger: TGCAGATCCAGGCTGTGCGTCCCAGTGATGAGGGCACTTACCGCTGCCTTGGCCGCAATGCCCTGGGTCAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370200.6
ENST00000477267.1
ENST00000477979.5
CDS CCA 72 bp CCTCAGTTATACCAGCACGGCTGCGCAACACTTCTTTaGAGCCTTCGCGGTGACGAGCAGCCGGGCGAAGCG +
Preference number: 6 (lower is better)
Translates to: PQLYQHGCATLL*SLRGDEQPGEA
Trigger: CGCTTCGCCCGGCTGCTCGTCACCGCGAAGGCTCCAAAGAAGTGTTGCGCAGCCGTGCTGGTATAACTGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465807.1
ENST00000477267.1
CDS CCA 72 bp GGTGAGGGTGTCCTCGGTCCCCAAGGTCTGCAGTCTTaGCCCTCTCTGAGTCGGGTTCATCTCTCGGGCTTC +
Preference number: 6 (lower is better)
Translates to: GEGVLGPQGLQS*PSLSRVHLSGF
Trigger: GAAGCCCGAGAGATGAACCCGACTCAGAGAGGGCCAAGACTGCAGACCTTGGGGACCGAGGACACCCTCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465807.1
ENST00000477267.1
CDS CCA 72 bp GCCTGGATCTGCAGCCAGCCAGTCACCTCAAACCTCTaGGGTCCACCCCTAAACTGCACAGAGATGTGGGGG +
Preference number: 6 (lower is better)
Translates to: AWICSQPVTSNL*GPPLNCTEMWG
Trigger: CCCCCACATCTCTGTGCAGTTTAGGGGTGGACCCCAGAGGTTTGAGGTGACTGGCTGGCTGCAGATCCAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370200.6
ENST00000477267.1
ENST00000477979.5
CDS CAA 72 bp AGGTGTGAGCACTGTCAAGCTAGCAGGGGCCTCCACTaGACCCAGGGCATTGCGGCCAAGGCAGCGGTAAGT +
Preference number: 6 (lower is better)
Translates to: RCEHCQASRGLH*TQGIAAKAAVS
Trigger: ACTTACCGCTGCCTTGGCCGCAATGCCCTGGGTCAAGTGGAGGCCCCTGCTAGCTTGACAGTGCTCACACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370200.6
ENST00000477267.1
ENST00000477979.5
CDS TCA 72 bp AGTCGGGTTCATCTCTCGGGCTTCCAGGCTTCTTTTTaGGGGGCGCTCTCCAGCTTCGGGCTCCAGTTCTGC +
Preference number: 6 (lower is better)
Translates to: SRVHLSGFQASF*GALSSFGLQFC
Trigger: GCAGAACTGGAGCCCGAAGCTGGAGAGCGCCCCTCAAAAAGAAGCCTGGAAGCCCGAGAGATGAACCCGACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000465807.1
ENST00000477267.1
CDS GCA 72 bp GCTTCGCCAGGACACCCTCAGTTATACCAGCACGGCTaGGCAACACTTCTTTGGAGCCTTCGCGGTGACGAG +
Preference number: 6 (lower is better)
Translates to: ASPGHPQLYQHG*ATLLWSLRGDE
Trigger: CTCGTCACCGCGAAGGCTCCAAAGAAGTGTTGCGCAGCCGTGCTGGTATAACTGAGGGTGTCCTGGCGAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465807.1
ENST00000477267.1
CDS CAA 72 bp GAGTCGGGTTCATCTCTCGGGCTTCCAGGCTTCTTTTaGAGGGGCGCTCTCCAGCTTCGGGCTCCAGTTCTG +
Preference number: 6 (lower is better)
Translates to: ESGSSLGLPGFF*RGALQLRAPVL
Trigger: CAGAACTGGAGCCCGAAGCTGGAGAGCGCCCCTCAAAAAGAAGCCTGGAAGCCCGAGAGATGAACCCGACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465807.1
ENST00000477267.1
CDS CCA 72 bp AACTGCACAGAGATGTGGGGGTCATCCCCTGGCAGCTaGATGTCCAAGCCATCCTTCCTCCACTCGATGGAG +
Preference number: 6 (lower is better)
Translates to: NCTEMWGSSPGS*MSKPSFLHSME
Trigger: CTCCATCGAGTGGAGGAAGGATGGCTTGGACATCCAGCTGCCAGGGGATGACCCCCACATCTCTGTGCAGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370200.6
ENST00000477267.1
ENST00000477979.5
CDS CCA 72 bp GCCTCCTCCTCAGGAACCAGGTTTAGTGATCGCAGCTaGGGGATGCCTGTAGAGTTCAGCTGGTCAGGTGTG +
Preference number: 6 (lower is better)
Translates to: ASSSGTRFSDRS*GMPVEFSWSGV
Trigger: CACACCTGACCAGCTGAACTCTACAGGCATCCCCCAGCTGCGATCACTAAACCTGGTTCCTGAGGAGGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370200.6
ENST00000477267.1
ENST00000477979.5
CDS CAA 90 bp GGATCCACCAGATGGCACTCCTTCGCTACTTCCTGTACTCCCAACTaGCCAGAGATGTCGCCTCTTTCCGCTAAGGCACAAAACTTGCAG +
Preference number: 6 (lower is better)
Translates to: GSTRWHSFATSCTPN*PEMSPLSAKAQNLQ
Trigger: CTGCAAGTTTTGTGCCTTAGCGGAAAGAGGCGACATCTCTGGCAAGTTGGGAGTACAGGAAGTAGCGAAGGAGTGCCATCTGGTGGATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465807.1
CDS GCA 72 bp GATGGCACTCCTTCGCTACTTCCTGTACTCCCAACTTaGCAGAGATGTCGCCTCTTTCCGCTAAGGCACAAA +
Preference number: 6 (lower is better)
Translates to: DGTPSLLPVLPT*QRCRLFPLRHK
Trigger: TTTGTGCCTTAGCGGAAAGAGGCGACATCTCTGGCAAGTTGGGAGTACAGGAAGTAGCGAAGGAGTGCCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465807.1
CDS CCA 72 bp TGTCCAAGCCATCCTTCCTCCACTCGATGGAGGCCATaGGGTAGGCAAACACTTCACAGCCAAAGATCACAT +
Preference number: 6 (lower is better)
Translates to: CPSHPSSTRWRP*GRQTLHSQRSH
Trigger: ATGTGATCTTTGGCTGTGAAGTGTTTGCCTACCCCATGGCCTCCATCGAGTGGAGGAAGGATGGCTTGGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370200.6
ENST00000477267.1
ENST00000477979.5
CDS CAA 72 bp AGATGGCACTCCTTCGCTACTTCCTGTACTCCCAACTaGCCAGAGATGTCGCCTCTTTCCGCTAAGGCACAA +
Preference number: 6 (lower is better)
Translates to: RWHSFATSCTPN*PEMSPLSAKAQ
Trigger: TTGTGCCTTAGCGGAAAGAGGCGACATCTCTGGCAAGTTGGGAGTACAGGAAGTAGCGAAGGAGTGCCATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465807.1