Pregenerated sensors for KATNBL1 (Homo sapiens)
Ensembl gene IDs: ENSG00000134152Ensembl transcript IDs: ENST00000256544.8, ENST00000557877.5, ENST00000559464.1, ENST00000559760.5, ENST00000560108.5, ENST00000560247.5, ENST00000560915.1
Found 47 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | CTAAAGGTTTACATTCAAGTGCTTGAAGGACTACTGCAGAGAAATTCAATTACTGGATGGGATGATGTGTaGACCACCAGCAGTGGTATT | + |
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Preference number: 2 (lower is better) Translates to: LKVYIQVLEGLLQRNSITGWDDV*TTSSGI Trigger: AATACCACTGCTGGTGGTTCACACATCATCCCATCC...AGTAATTGAATTTCTCTGCAGTAGTCCTTCAAGCACTTGAATGTAAACCTTTAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000256544.8 |
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| 3UTR-3UTR GCA 90 bp | CTACTGCAGAGAAATTCAATTACTAAAAACCTTTGCTCAGATGCCTGTCAGGCATCCATGATTTTATCATaGCAGAAGCATGGTTGGTTT | + |
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Preference number: 2 (lower is better) Translates to: LLQRNSITKNLCSDACQASMILS*QKHGWF Trigger: AAACCAACCATGCTTCTGGCATGATAAAATCATGGA...TGCCTGACAGGCATCTGAGCAAAGGTTTTTAGTAATTGAATTTCTCTGCAGTAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000256544.8 |
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| CDS-3UTR GCA 90 bp | TCAGGGGCTGTACATGAAACATGTTCAATGGCCAATTCCTGTGCTTGCTGCCAAAATGGCCAATTCCTGTaGTTGCTGCCAAGGTCACAG | + |
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Preference number: 4 (lower is better) Translates to: SGAVHETCSMANSCACCQNGQFL*LLPRSQ Trigger: CTGTGACCTTGGCAGCAAGCACAGGAATTGGCCATT...TTGGCAGCAAGCACAGGAATTGGCCATTGAACATGTTTCATGTACAGCCCCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000559760.5 |
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| CDS-3UTR GCA 90 bp | GCATTTCAGGGGCTGTACATGAAACATGTTCAATGGCCAATTCCTGTGCTTGCTGCCAATTCCTGTGCTTaGTGCCAAGGTCACAGTTAC | + |
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Preference number: 4 (lower is better) Translates to: AFQGLYMKHVQWPIPVLAANSCA*CQGHSY Trigger: GTAACTGTGACCTTGGCAGCAAGCACAGGAATTGGC...AGCAAGCACAGGAATTGGCCATTGAACATGTTTCATGTACAGCCCCTGAAATGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000559760.5 |
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| CDS-3UTR TCA 90 bp | GGGCTGTACATGAAACATGTTCAATGGCCAATTCCTGTGCTTGCTGCCAAGGTCCCTCGTCTTGTTTTCTaGTGCTGTCCTTATTGGATT | + |
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Preference number: 4 (lower is better) Translates to: GLYMKHVQWPIPVLAAKVPRLVF*CCPYWI Trigger: AATCCAATAAGGACAGCATCAGAAAACAAGACGAGG...GACCTTGGCAGCAAGCACAGGAATTGGCCATTGAACATGTTTCATGTACAGCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000559760.5 |
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| CDS-3UTR GCA 90 bp | AGCATTTCAGGGGCTGTACATGAAACATGTTCAATGGCCAATTCCTGTGCTTGCAATTCCTGTGCTTGCTaGCAAGGTCACAGTTACACG | + |
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Preference number: 4 (lower is better) Translates to: SISGAVHETCSMANSCACNSCAC*QGHSYT Trigger: CGTGTAACTGTGACCTTGGCAGCAAGCACAGGAATT...GCAAGCACAGGAATTGGCCATTGAACATGTTTCATGTACAGCCCCTGAAATGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000559760.5 |
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| CDS-3UTR TCA 90 bp | CATATTAAGGATGGGATGATGTGTGAACCACCAGCAGTGGTATTAAACCCCAATGGATGGGATGATGTGTaGACCACCAGCAGTGGTATT | + |
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Preference number: 4 (lower is better) Translates to: HIKDGMMCEPPAVVLNPNGWDDV*TTSSGI Trigger: AATACCACTGCTGGTGGTTCACACATCATCCCATCC...ATTGGGGTTTAATACCACTGCTGGTGGTTCACACATCATCCCATCCTTAATATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000256544.8 |
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| CDS-3UTR TCA 90 bp | GCATTTCAGGGGCTGTACATGAAACATGTTCAATGGCCAATTCCTGTGCTTGCTTTCAGGGGCTGTACATaGAACATGTTCAATGGCCAA | + |
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Preference number: 4 (lower is better) Translates to: AFQGLYMKHVQWPIPVLAFRGCT*NMFNGQ Trigger: TTGGCCATTGAACATGTTTCATGTACAGCCCCTGAA...AGCAAGCACAGGAATTGGCCATTGAACATGTTTCATGTACAGCCCCTGAAATGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000559760.5 |
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| CDS-3UTR TCA 90 bp | CTGTACATGAAACATGTTCAATGGCCAATTCCTGTGCTTGCTGCCAAGGTCACATTATCCCTTGTTTCCTaGGTTCCTCGTCTTGTTTTC | + |
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Preference number: 4 (lower is better) Translates to: LYMKHVQWPIPVLAAKVTLSLVS*VPRLVF Trigger: GAAAACAAGACGAGGAACTCAGGAAACAAGGGATAA...TGTGACCTTGGCAGCAAGCACAGGAATTGGCCATTGAACATGTTTCATGTACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000559760.5 |
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| CDS-3UTR CCA 90 bp | AGCATTTCAGGGGCTGTACATGAAACATGTTCAATGGCCAATTCCTGTGCTTGCATGAAACATGTTCAATaGCCAATTCCTGTGCTTGCT | + |
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Preference number: 4 (lower is better) Translates to: SISGAVHETCSMANSCACMKHVQ*PIPVLA Trigger: AGCAAGCACAGGAATTGGCCATTGAACATGTTTCAT...GCAAGCACAGGAATTGGCCATTGAACATGTTTCATGTACAGCCCCTGAAATGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000559760.5 |
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| CDS-3UTR GCA 90 bp | CATATTAAGGATGGGATGATGTGTGAACCACCAGCAGTGGTATTAAACCCCAATAAACCTTTGCTCAGATaGCTGTCAGGCATATTAAGG | + |
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Preference number: 4 (lower is better) Translates to: HIKDGMMCEPPAVVLNPNKPLLR*LSGILR Trigger: CCTTAATATGCCTGACAGGCATCTGAGCAAAGGTTT...ATTGGGGTTTAATACCACTGCTGGTGGTTCACACATCATCCCATCCTTAATATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000256544.8 |
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| CDS-3UTR TCA 90 bp | CTACTGCAGAGAAATTCAATTACTAAAAACCTTTGCTCAGATGCCTGTCAGGCATTACATTCAAGTGCTTaGAGGACTACTGCAGAGAAA | + |
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Preference number: 4 (lower is better) Translates to: LLQRNSITKNLCSDACQALHSSA*RTTAEK Trigger: TTTCTCTGCAGTAGTCCTTCAAGCACTTGAATGTAA...TGCCTGACAGGCATCTGAGCAAAGGTTTTTAGTAATTGAATTTCTCTGCAGTAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000256544.8 |
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| CDS-3UTR GCA 90 bp | CATATTAAGGATGGGATGATGTGTGAACCACCAGCAGTGGTATTAAACCCCAATTCCATGATTTTATCATaGCAGAAGCATGGTTGGTTT | + |
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Preference number: 4 (lower is better) Translates to: HIKDGMMCEPPAVVLNPNSMILS*QKHGWF Trigger: AAACCAACCATGCTTCTGGCATGATAAAATCATGGA...ATTGGGGTTTAATACCACTGCTGGTGGTTCACACATCATCCCATCCTTAATATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000256544.8 |
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| CDS-3UTR GCA 90 bp | CTACTGCAGAGAAATTCAATTACTAAAAACCTTTGCTCAGATGCCTGTCAGGCAAGGTTTACATTCAAGTaGTTGAAGGACTACTGCAGA | + |
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Preference number: 4 (lower is better) Translates to: LLQRNSITKNLCSDACQARFTFK*LKDYCR Trigger: TCTGCAGTAGTCCTTCAAGCACTTGAATGTAAACCT...TGCCTGACAGGCATCTGAGCAAAGGTTTTTAGTAATTGAATTTCTCTGCAGTAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000256544.8 |
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| CDS-3UTR TCA 90 bp | CTAAAGGTTTACATTCAAGTGCTTGAAGGACTACTGCAGAGAAATTCAATTACTATATTAAGGATGGGATaGTGTGTGAACCACCAGCAG | + |
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Preference number: 4 (lower is better) Translates to: LKVYIQVLEGLLQRNSITILRMG*CVNHQQ Trigger: CTGCTGGTGGTTCACACATCATCCCATCCTTAATAT...AGTAATTGAATTTCTCTGCAGTAGTCCTTCAAGCACTTGAATGTAAACCTTTAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000256544.8 |
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| CDS-3UTR GCA 90 bp | CATATTAAGGATGGGATGATGTGTGAACCACCAGCAGTGGTATTAAACCCCAATTGCTTGAAGGACTACTaGAGAGAAATTCAATTACTA | + |
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Preference number: 4 (lower is better) Translates to: HIKDGMMCEPPAVVLNPNCLKDY*REIQLL Trigger: TAGTAATTGAATTTCTCTGCAGTAGTCCTTCAAGCA...ATTGGGGTTTAATACCACTGCTGGTGGTTCACACATCATCCCATCCTTAATATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000256544.8 |
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| CDS-3UTR GCA 90 bp | TTGAAGGACTACTGCAGAGAAATTCAATTACTAAAAACCTTTGCTCAGATGCCTATTACTAAAAACCTTTaGTCAGATGCCTGTCAGGCA | + |
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Preference number: 4 (lower is better) Translates to: LKDYCREIQLLKTFAQMPITKNL*SDACQA Trigger: TGCCTGACAGGCATCTGAGCAAAGGTTTTTAGTAAT...AGGCATCTGAGCAAAGGTTTTTAGTAATTGAATTTCTCTGCAGTAGTCCTTCAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000256544.8 |
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| CDS TCA 90 bp | CCCTTCCCCAGGTGCAGCTGTCGACTCCACCCGAAGATAAATAAGTaGCAACAGGTTCGGTCCACGCCTCTCCCGGCCCAGTCCCCTGGA | + |
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Preference number: 5 (lower is better) Translates to: PFPRCSCRLHPKINK*QQVRSTPLPAQSPG Trigger: TCCAGGGGACTGGGCCGGGAGAGGCGTGGACCGAACCTGTTGTCACTTATTTATCTTCGGGTGGAGTCGACAGCTGCACCTGGGGAAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000560915.1 |
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| CDS CCA 90 bp | CGGGTGATTTCTGCATTTCCAACTGAGGTACCTGGTTCATCTCACTaGGACTGGCTGGACAGTGGATGCAGCCTACAGAGGGCGAGCGGC | + |
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Preference number: 5 (lower is better) Translates to: RVISAFPTEVPGSSH*DWLDSGCSLQRASG Trigger: GCCGCTCGCCCTCTGTAGGCTGCATCCACTGTCCAGCCAGTCCCAGTGAGATGAACCAGGTACCTCAGTTGGAAATGCAGAAATCACCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000557877.5 |
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| CDS GCA 90 bp | CAAGTCCATTCCAAGATGGCCATTATAATAGGAACAGCTCCGGTCTaGAGCTCCCAGGGTGATCAACACAGAAGACGGGTGATTTCTGCA | + |
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Preference number: 5 (lower is better) Translates to: QVHSKMAIIIGTAPV*SSQGDQHRRRVISA Trigger: TGCAGAAATCACCCGTCTTCTGTGTTGATCACCCTGGGAGCTGCAGACCGGAGCTGTTCCTATTATAATGGCCATCTTGGAATGGACTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000557877.5 |
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| CDS-3UTR CAA 90 bp | TCAGGGGCTGTACATGAAACATGTTCAATGGCCAATTCCTGTGCTTGCTGCCAAGGCCAATTCCTGTGCTaGCTGCCAAGGTCACAGTTA | + |
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Preference number: 5 (lower is better) Translates to: SGAVHETCSMANSCACCQGQFLC*LPRSQL Trigger: TAACTGTGACCTTGGCAGCAAGCACAGGAATTGGCC...TTGGCAGCAAGCACAGGAATTGGCCATTGAACATGTTTCATGTACAGCCCCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000559760.5 |
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| CDS GCA 90 bp | GGGGCTGTACATGAAACATGTTCAATGGCCAATTCCTGTGCTTGCTaGCAAGGTCACAGTTACACGCAGAGGACCTTAGCTATATTACCA | + |
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Preference number: 5 (lower is better) Translates to: GAVHETCSMANSCAC*QGHSYTQRTLAILP Trigger: TGGTAATATAGCTAAGGTCCTCTGCGTGTAACTGTGACCTTGGCAGCAAGCACAGGAATTGGCCATTGAACATGTTTCATGTACAGCCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000559760.5 |
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| CDS CCA 90 bp | TCCTCTAGCATAGCATTTCAGGGGCTGTACATGAAACATGTTCAATaGCCAATTCCTGTGCTTGCTGCCAAGGTCACAGTTACACGCAGA | + |
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Preference number: 5 (lower is better) Translates to: SSSIAFQGLYMKHVQ*PIPVLAAKVTVTRR Trigger: TCTGCGTGTAACTGTGACCTTGGCAGCAAGCACAGGAATTGGCCATTGAACATGTTTCATGTACAGCCCCTGAAATGCTATGCTAGAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000559760.5 |
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| CDS GCA 90 bp | TCAGGGGCTGTACATGAAACATGTTCAATGGCCAATTCCTGTGCTTaGTGCCAAGGTCACAGTTACACGCAGAGGACCTTAGCTATATTA | + |
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Preference number: 5 (lower is better) Translates to: SGAVHETCSMANSCA*CQGHSYTQRTLAIL Trigger: TAATATAGCTAAGGTCCTCTGCGTGTAACTGTGACCTTGGCAGCAAGCACAGGAATTGGCCATTGAACATGTTTCATGTACAGCCCCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000559760.5 |
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| CDS-3UTR CAA 90 bp | GCATTTCAGGGGCTGTACATGAAACATGTTCAATGGCCAATTCCTGTGCTTGCTCCTGAGTTCCTCGTCTaGTTTTCTGATGCTGTCCTT | + |
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Preference number: 5 (lower is better) Translates to: AFQGLYMKHVQWPIPVLAPEFLV*FSDAVL Trigger: AAGGACAGCATCAGAAAACAAGACGAGGAACTCAGG...AGCAAGCACAGGAATTGGCCATTGAACATGTTTCATGTACAGCCCCTGAAATGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000559760.5 |
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| CDS-3UTR CAA 90 bp | GCATTTCAGGGGCTGTACATGAAACATGTTCAATGGCCAATTCCTGTGCTTGCTTATGTTTCTTATCCCTaGTTTCCTGAGTTCCTCGTC | + |
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Preference number: 5 (lower is better) Translates to: AFQGLYMKHVQWPIPVLAYVSYP*FPEFLV Trigger: GACGAGGAACTCAGGAAACAAGGGATAAGAAACATA...AGCAAGCACAGGAATTGGCCATTGAACATGTTTCATGTACAGCCCCTGAAATGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000559760.5 |
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| CDS-3UTR CAA 90 bp | CATATTAAGGATGGGATGATGTGTGAACCACCAGCAGTGGTATTAAACCCCAATGAGCAAGAAATCTGCTaGAGATTCGTATCAGTAGTC | + |
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Preference number: 5 (lower is better) Translates to: HIKDGMMCEPPAVVLNPNEQEIC*RFVSVV Trigger: GACTACTGATACGAATCTCAAGCAGATTTCTTGCTC...ATTGGGGTTTAATACCACTGCTGGTGGTTCACACATCATCCCATCCTTAATATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000256544.8 |
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| CDS-3UTR CAA 90 bp | CATATTAAGGATGGGATGATGTGTGAACCACCAGCAGTGGTATTAAACCCCAATTTTACATTCAAGTGCTaGAAGGACTACTGCAGAGAA | + |
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Preference number: 5 (lower is better) Translates to: HIKDGMMCEPPAVVLNPNFTFKC*KDYCRE Trigger: TTCTCTGCAGTAGTCCTTCAAGCACTTGAATGTAAA...ATTGGGGTTTAATACCACTGCTGGTGGTTCACACATCATCCCATCCTTAATATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000256544.8 |
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| CDS CCA 90 bp | TACAATACTAAAATTTCCTGTGCCTTAGTTTCTTCACTGTCAAAATaGGGACAACAGTATATATCCCAAAGTAAAGCTCTTAATACGCCC | + |
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Preference number: 5 (lower is better) Translates to: YNTKISCALVSSLSK*GQQYISQSKALNTP Trigger: GGGCGTATTAAGAGCTTTACTTTGGGATATATACTGTTGTCCCCATTTTGACAGTGAAGAAACTAAGGCACAGGAAATTTTAGTATTGTA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000560915.1 |
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| CDS CCA 72 bp | GCCTGCAGGTGGGCCCAGGGCGCGGCCAAGCCCGGCTaGAGTAGCCCTGCCAGGGCAGGGCAGCTGCGGGCG | + |
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Preference number: 6 (lower is better) Translates to: ACRWAQGAAKPG*SSPARAGQLRA Trigger: CGCCCGCAGCTGCCCTGCCCTGGCAGGGCTACTCCAGCCGGGCTTGGCCGCGCCCTGGGCCCACCTGCAGGC 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000560915.1 |
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| CDS TCA 72 bp | AGGTGCAGCTGTCGACTCCACCCGAAGATAAATAAGTaGCAACAGGTTCGGTCCACGCCTCTCCCGGCCCAG | + |
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Preference number: 6 (lower is better) Translates to: RCSCRLHPKINK*QQVRSTPLPAQ Trigger: CTGGGCCGGGAGAGGCGTGGACCGAACCTGTTGTCACTTATTTATCTTCGGGTGGAGTCGACAGCTGCACCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000560915.1 |
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| CDS CCA 72 bp | TCTGCATTTCCAACTGAGGTACCTGGTTCATCTCACTaGGACTGGCTGGACAGTGGATGCAGCCTACAGAGG | + |
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Preference number: 6 (lower is better) Translates to: SAFPTEVPGSSH*DWLDSGCSLQR Trigger: CCTCTGTAGGCTGCATCCACTGTCCAGCCAGTCCCAGTGAGATGAACCAGGTACCTCAGTTGGAAATGCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000557877.5 |
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| CDS GCA 72 bp | TCCAAGATGGCCATTATAATAGGAACAGCTCCGGTCTaGAGCTCCCAGGGTGATCAACACAGAAGACGGGTG | + |
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Preference number: 6 (lower is better) Translates to: SKMAIIIGTAPV*SSQGDQHRRRV Trigger: CACCCGTCTTCTGTGTTGATCACCCTGGGAGCTGCAGACCGGAGCTGTTCCTATTATAATGGCCATCTTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000557877.5 |
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| CDS CCA 72 bp | GTTCCTTCCGATGTGTCCGGAGTTTCTTCCTTCCGGTaGGTTCGTAGTCTGGCCGAATTCAAGAATGAAGCC | + |
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Preference number: 6 (lower is better) Translates to: VPSDVSGVSSFR*VRSLAEFKNEA Trigger: GGCTTCATTCTTGAATTCGGCCAGACTACGAACCCACCGGAAGGAAGAAACTCCGGACACATCGGAAGGAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000559464.1 |
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| CDS CCA 72 bp | AGTCGTGGACCTTCACGCTGTTACAGCTCTCAAAAATaGTGTGTCCAGAGTTTCTTCCCTCTGGTGGGTTCG | + |
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Preference number: 6 (lower is better) Translates to: SRGPSRCYSSQK*CVQSFFPLVGS Trigger: CGAACCCACCAGAGGGAAGAAACTCTGGACACACCATTTTTGAGAGCTGTAACAGCGTGAAGGTCCACGACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000559464.1 |
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| CDS TCA 72 bp | TATAATAGGAACAGCTCCGGTCTGCAGCTCCCAGGGTaGTCAACACAGAAGACGGGTGATTTCTGCATTTCC | + |
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Preference number: 6 (lower is better) Translates to: YNRNSSGLQLPG*STQKTGDFCIS Trigger: GGAAATGCAGAAATCACCCGTCTTCTGTGTTGATCACCCTGGGAGCTGCAGACCGGAGCTGTTCCTATTATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000557877.5 |
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| CDS TCA 72 bp | GGATGTCATCATGTTGCCCAGGCTGTCTCAAACTTGTaGGCTCAAGTGATTTGCCCTTCTTGGCCTCCCAAA | + |
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Preference number: 6 (lower is better) Translates to: GCHHVAQAVSNL*AQVICPSWPPK Trigger: TTTGGGAGGCCAAGAAGGGCAAATCACTTGAGCTCACAAGTTTGAGACAGCCTGGGCAACATGATGACATCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000560247.5 |
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| CDS CCA 72 bp | CTCAAAAATGGTGTGTCCAGAGTTTCTTCCCTCTGGTaGGTTCGTGGTCCAGAGTTTGTTCCTTCCGATGTG | + |
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Preference number: 6 (lower is better) Translates to: LKNGVSRVSSLW*VRGPEFVPSDV Trigger: CACATCGGAAGGAACAAACTCTGGACCACGAACCCACCAGAGGGAAGAAACTCTGGACACACCATTTTTGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000559464.1 |
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| CDS GCA 72 bp | CATGAAACATGTTCAATGGCCAATTCCTGTGCTTGCTaGCAAGGTCACAGTTACACGCAGAGGACCTTAGCT | + |
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Preference number: 6 (lower is better) Translates to: HETCSMANSCAC*QGHSYTQRTLA Trigger: AGCTAAGGTCCTCTGCGTGTAACTGTGACCTTGGCAGCAAGCACAGGAATTGGCCATTGAACATGTTTCATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000559760.5 |
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| CDS GCA 72 bp | GTACATGAAACATGTTCAATGGCCAATTCCTGTGCTTaGTGCCAAGGTCACAGTTACACGCAGAGGACCTTA | + |
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Preference number: 6 (lower is better) Translates to: VHETCSMANSCA*CQGHSYTQRTL Trigger: TAAGGTCCTCTGCGTGTAACTGTGACCTTGGCAGCAAGCACAGGAATTGGCCATTGAACATGTTTCATGTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000559760.5 |
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| CDS CCA 72 bp | ATAGCATTTCAGGGGCTGTACATGAAACATGTTCAATaGCCAATTCCTGTGCTTGCTGCCAAGGTCACAGTT | + |
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Preference number: 6 (lower is better) Translates to: IAFQGLYMKHVQ*PIPVLAAKVTV Trigger: AACTGTGACCTTGGCAGCAAGCACAGGAATTGGCCATTGAACATGTTTCATGTACAGCCCCTGAAATGCTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000559760.5 |
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| CDS CAA 90 bp | ATTCCCACTATGGCAAAGGGTATGTGTAGTTATCTCTCAAGAATCTaGAAGGTGAAAACAGTTTATAACCACGGCGCCTCATGGTACCGC | + |
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Preference number: 6 (lower is better) Translates to: IPTMAKGMCSYLSRI*KVKTVYNHGASWYR Trigger: GCGGTACCATGAGGCGCCGTGGTTATAAACTGTTTTCACCTTCAAGATTCTTGAGAGATAACTACACATACCCTTTGCCATAGTGGGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000560108.5 |
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| CDS CCA 72 bp | GATAAAGGAGGTAGTAGAGCAACAGAGTTAAAAGCGTaGAGCCAGCCTGCTCGGGTGTTAATTATATTAGCT | + |
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Preference number: 6 (lower is better) Translates to: DKGGSRATELKA*SQPARVLIILA Trigger: AGCTAATATAATTAACACCCGAGCAGGCTGGCTCCACGCTTTTAACTCTGTTGCTCTACTACCTCCTTTATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000560915.1 |
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| CDS CCA 72 bp | GTGAAAACAGTTTATAACCACTCAAGAATGAAGTCGTaGACCTTCACGCTGTTACAGCTCTCAAAAATGGTG | + |
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Preference number: 6 (lower is better) Translates to: VKTVYNHSRMKS*TFTLLQLSKMV Trigger: CACCATTTTTGAGAGCTGTAACAGCGTGAAGGTCCACGACTTCATTCTTGAGTGGTTATAAACTGTTTTCAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000559464.1 |
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| CDS CAA 72 bp | TGCAATCGACAATTCTTATGCAGTTATGTCAAGTTTTaGTCCTGCGAAACAAAAGCTCATCCGTCAGGAATC | + |
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Preference number: 6 (lower is better) Translates to: CNRQFLCSYVKF*SCETKAHPSGI Trigger: GATTCCTGACGGATGAGCTTTTGTTTCGCAGGACAAAAACTTGACATAACTGCATAAGAATTGTCGATTGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000560915.1 |
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| CDS TCA 72 bp | TTAGGTGGACTAGTTTCTCATAATTCTCGCAAGTGCTaGACTGATGATTATTACACACCTAATTTCTCTTAC | + |
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Preference number: 6 (lower is better) Translates to: LGGLVSHNSRKC*TDDYYTPNFSY Trigger: GTAAGAGAAATTAGGTGTGTAATAATCATCAGTTCAGCACTTGCGAGAATTATGAGAAACTAGTCCACCTAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000560915.1 |
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| CDS CCA 72 bp | AAAATTTCCTGTGCCTTAGTTTCTTCACTGTCAAAATaGGGACAACAGTATATATCCCAAAGTAAAGCTCTT | + |
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Preference number: 6 (lower is better) Translates to: KISCALVSSLSK*GQQYISQSKAL Trigger: AAGAGCTTTACTTTGGGATATATACTGTTGTCCCCATTTTGACAGTGAAGAAACTAAGGCACAGGAAATTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000560915.1 |
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