Pregenerated sensors for KATNAL1 (Homo sapiens)
Ensembl gene IDs: ENSG00000102781Ensembl transcript IDs: ENST00000380615.8, ENST00000380617.7, ENST00000414289.5, ENST00000441394.1, ENST00000480854.1
Found 185 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ACACTGCGCCCTTGCTTCAGCCTCCCTGATAGACTGGTTTGGGTGTaGAATATTAATGCAGGAATACGTGGAATACCAGCACAAAGCCGG | + |
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Preference number: 1 (lower is better) Translates to: TLRPCFSLPDRLVWV*NINAGIRGIPAQSR Trigger: CCGGCTTTGTGCTGGTATTCCACGTATTCCTGCATTAATATTGCACACCCAAACCAGTCTATCAGGGAGGCTGAAGCAAGGGCGCAGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| 3UTR CCA 90 bp | GCAGTGATCCTGCGAGACACTGTGTCCACTCACAGCCATGTTAACTaGGGGCCACTCCCTGCTGCCGTACCATCATATGAATATACATTT | + |
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Preference number: 1 (lower is better) Translates to: AVILRDTVSTHSHVN*GPLPAAVPSYEYTF Trigger: AAATGTATATTCATATGATGGTACGGCAGCAGGGAGTGGCCCCCAGTTAACATGGCTGTGAGTGGACACAGTGTCTCGCAGGATCACTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| 3UTR CCA 90 bp | AATATCACACTGCGCCCTTGCTTCAGCCTCCCTGATAGACTGGTTTaGGTGTGCAATATTAATGCAGGAATACGTGGAATACCAGCACAA | + |
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Preference number: 1 (lower is better) Translates to: NITLRPCFSLPDRLV*VCNINAGIRGIPAQ Trigger: TTGTGCTGGTATTCCACGTATTCCTGCATTAATATTGCACACCCAAACCAGTCTATCAGGGAGGCTGAAGCAAGGGCGCAGTGTGATATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| 3UTR CCA 90 bp | CCTAAAATATCACACTGCGCCCTTGCTTCAGCCTCCCTGATAGACTaGTTTGGGTGTGCAATATTAATGCAGGAATACGTGGAATACCAG | + |
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Preference number: 1 (lower is better) Translates to: PKISHCALASASLID*FGCAILMQEYVEYQ Trigger: CTGGTATTCCACGTATTCCTGCATTAATATTGCACACCCAAACCAGTCTATCAGGGAGGCTGAAGCAAGGGCGCAGTGTGATATTTTAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| 3UTR TCA 90 bp | AACAAAAGTCTTAACAACGCACTTACAAGCCATCATAACATGCAGTaGTCCTGCGAGACACTGTGTCCACTCACAGCCATGTTAACTGGG | + |
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Preference number: 1 (lower is better) Translates to: NKSLNNALTSHHNMQ*SCETLCPLTAMLTG Trigger: CCCAGTTAACATGGCTGTGAGTGGACACAGTGTCTCGCAGGATCACTGCATGTTATGATGGCTTGTAAGTGCGTTGTTAAGACTTTTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| 3UTR TCA 90 bp | CTCCTACTCACTGTGTCTTGGACCAACCAATACACGTCTACAGAATaGAGGGACTATCTGATCAGATATCTGCAAAGCAGACTTAGCTTA | + |
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Preference number: 1 (lower is better) Translates to: LLLTVSWTNQYTSTE*RDYLIRYLQSRLSL Trigger: TAAGCTAAGTCTGCTTTGCAGATATCTGATCAGATAGTCCCTTCATTCTGTAGACGTGTATTGGTTGGTCCAAGACACAGTGAGTAGGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| 3UTR TCA 90 bp | CTTATAATCTGTGTCTCAGAAAGAAGGGCAATTTACAGCATCAGATaGATACTGGAGTTTAGGTCAGACTTAAGTTATCTGAAAAGAACA | + |
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Preference number: 1 (lower is better) Translates to: LIICVSERRAIYSIR*ILEFRSDLSYLKRT Trigger: TGTTCTTTTCAGATAACTTAAGTCTGACCTAAACTCCAGTATTCATCTGATGCTGTAAATTGCCCTTCTTTCTGAGACACAGATTATAAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| 3UTR-3UTR TCA 90 bp | GCTCCTACTCACTGTGTCTTGGACCAACCAATACACGTCTACAGAATGAAGGGAAGGCAGAGGTTGCAGTaGGCCAAGATCAACCACTGC | + |
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Preference number: 2 (lower is better) Translates to: APTHCVLDQPIHVYRMKGRQRLQ*AKINHC Trigger: GCAGTGGTTGATCTTGGCTCACTGCAACCTCTGCCT...TCCCTTCATTCTGTAGACGTGTATTGGTTGGTCCAAGACACAGTGAGTAGGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| 3UTR-3UTR GCA 90 bp | GCTCCTACTCACTGTGTCTTGGACCAACCAATACACGTCTACAGAATGAAGGGAATCACACTGCGCCCTTaGTTCAGCCTCCCTGATAGA | + |
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Preference number: 2 (lower is better) Translates to: APTHCVLDQPIHVYRMKGITLRP*FSLPDR Trigger: TCTATCAGGGAGGCTGAAGCAAGGGCGCAGTGTGAT...TCCCTTCATTCTGTAGACGTGTATTGGTTGGTCCAAGACACAGTGAGTAGGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| 3UTR-3UTR GCA 90 bp | GCTCCTACTCACTGTGTCTTGGACCAACCAATACACGTCTACAGAATGAAGGGACCTAAAATATCACACTaGGCCCTTGCTTCAGCCTCC | + |
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Preference number: 2 (lower is better) Translates to: APTHCVLDQPIHVYRMKGPKISH*ALASAS Trigger: GGAGGCTGAAGCAAGGGCGCAGTGTGATATTTTAGG...TCCCTTCATTCTGTAGACGTGTATTGGTTGGTCCAAGACACAGTGAGTAGGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| 3UTR-3UTR TCA 90 bp | CTCACAGCCATGTTAACTGGGGGCCACTCCCTGCTGCCGTACCATCATATGAATAAATACCACAGAGCGTaGGAATATTCCTCAGTAAAG | + |
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Preference number: 2 (lower is better) Translates to: LTAMLTGGHSLLPYHHMNKYHRA*EYSSVK Trigger: CTTTACTGAGGAATATTCTCACGCTCTGTGGTATTT...ATTCATATGATGGTACGGCAGCAGGGAGTGGCCCCCAGTTAACATGGCTGTGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| 3UTR-3UTR TCA 90 bp | CTCACAGCCATGTTAACTGGGGGCCACTCCCTGCTGCCGTACCATCATATGAATGGCACTATTCGAAACTaGGAATTCAGGATGTTATCA | + |
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Preference number: 2 (lower is better) Translates to: LTAMLTGGHSLLPYHHMNGTIRN*EFRMLS Trigger: TGATAACATCCTGAATTCTCAGTTTCGAATAGTGCC...ATTCATATGATGGTACGGCAGCAGGGAGTGGCCCCCAGTTAACATGGCTGTGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| 3UTR-3UTR TCA 90 bp | CTCACAGCCATGTTAACTGGGGGCCACTCCCTGCTGCCGTACCATCATATGAATTTGGAACTGCTGCTTTaGATGCAATACATCCAAATA | + |
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Preference number: 2 (lower is better) Translates to: LTAMLTGGHSLLPYHHMNLELLL*MQYIQI Trigger: TATTTGGATGTATTGCATTCAAAGCAGCAGTTCCAA...ATTCATATGATGGTACGGCAGCAGGGAGTGGCCCCCAGTTAACATGGCTGTGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| 3UTR-3UTR CCA 90 bp | CTTTGTCTTGGTCCACAGAGCTCCTACTCACTGTGTCTTGGACCAACCAATACAGCCTCCCTGATAGACTaGTTTGGGTGTGCAATATTA | + |
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Preference number: 2 (lower is better) Translates to: LCLGPQSSYSLCLGPTNTASLID*FGCAIL Trigger: TAATATTGCACACCCAAACCAGTCTATCAGGGAGGC...TGTATTGGTTGGTCCAAGACACAGTGAGTAGGAGCTCTGTGGACCAAGACAAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| 3UTR-3UTR TCA 90 bp | CTTTGTCTTGGTCCACAGAGCTCCTACTCACTGTGTCTTGGACCAACCAATACACAACACACTGTCTTCTaGAATAGTGTGTGTGTGTGT | + |
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Preference number: 2 (lower is better) Translates to: LCLGPQSSYSLCLGPTNTQHTVF*NSVCVC Trigger: ACACACACACACACTATTTCAGAAGACAGTGTGTTG...TGTATTGGTTGGTCCAAGACACAGTGAGTAGGAGCTCTGTGGACCAAGACAAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| 3UTR-3UTR GCA 90 bp | CATAGATTCACCAGGTATTGGTTTGCTTACTTTTTGAGTAATTCGTGCTTTCAGCTGGGAGGCAGAAGTTaGAGTGAGCCGAGATCATGC | + |
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Preference number: 2 (lower is better) Translates to: HRFTRYWFAYFLSNSCFQLGGRS*SEPRSC Trigger: GCATGATCTCGGCTCACTGCAACTTCTGCCTCCCAG...CTGAAAGCACGAATTACTCAAAAAGTAAGCAAACCAATACCTGGTGAATCTATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| 3UTR-3UTR TCA 90 bp | GGAACCGAAGTCCACTCACACAACATGAAATACTTGCCTAGTCCTTCATTTTATATAGGTCCCTCATGTTaGCAGAGCACAGAATTGGAA | + |
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Preference number: 2 (lower is better) Translates to: GTEVHSHNMKYLPSPSFYIGPSC*QSTELE Trigger: TTCCAATTCTGTGCTCTGTCAACATGAGGGACCTAT...ATAAAATGAAGGACTAGGCAAGTATTTCATGTTGTGTGAGTGGACTTCGGTTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| 3UTR-3UTR CCA 90 bp | CATAGATTCACCAGGTATTGGTTTGCTTACTTTTTGAGTAATTCGTGCTTTCAGAGTCCAGCTTTGTCTTaGTCCACAGAGCTCCTACTC | + |
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Preference number: 2 (lower is better) Translates to: HRFTRYWFAYFLSNSCFQSPALS*STELLL Trigger: GAGTAGGAGCTCTGTGGACCAAGACAAAGCTGGACT...CTGAAAGCACGAATTACTCAAAAAGTAAGCAAACCAATACCTGGTGAATCTATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| 3UTR-3UTR TCA 90 bp | GGAACCGAAGTCCACTCACACAACATGAAATACTTGCCTAGTCCTTCATTTTATAGAAACTGCCAAGTTTaGACTGTACTCTCTAGTCCA | + |
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Preference number: 2 (lower is better) Translates to: GTEVHSHNMKYLPSPSFYRNCQV*TVLSSP Trigger: TGGACTAGAGAGTACAGTTCAAACTTGGCAGTTTCT...ATAAAATGAAGGACTAGGCAAGTATTTCATGTTGTGTGAGTGGACTTCGGTTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| 3UTR-3UTR GCA 90 bp | GGAACCGAAGTCCACTCACACAACATGAAATACTTGCCTAGTCCTTCATTTTATAGATTTCATTTGTTTTaGGTTAGCCACAGAGAGTGG | + |
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Preference number: 2 (lower is better) Translates to: GTEVHSHNMKYLPSPSFYRFHLF*VSHREW Trigger: CCACTCTCTGTGGCTAACGCAAAACAAATGAAATCT...ATAAAATGAAGGACTAGGCAAGTATTTCATGTTGTGTGAGTGGACTTCGGTTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| 3UTR-3UTR GCA 90 bp | TTTTGCGTTAGCCACAGAGAGTGGACTTGTTTAGAATGTAAAAGTATTTATCTCCTGAGACAGGAGAATTaGTTGAATCTAGGAGGCAGA | + |
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Preference number: 2 (lower is better) Translates to: FCVSHREWTCLECKSIYLLRQEN*LNLGGR Trigger: TCTGCCTCCTAGATTCAAGCAATTCTCCTGTCTCAG...GAGATAAATACTTTTACATTCTAAACAAGTCCACTCTCTGTGGCTAACGCAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| 3UTR-3UTR GCA 90 bp | GGAACCGAAGTCCACTCACACAACATGAAATACTTGCCTAGTCCTTCATTTTATCTACAGTCATTGTGCTaGAGAACTCAAAATACTCAT | + |
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Preference number: 2 (lower is better) Translates to: GTEVHSHNMKYLPSPSFYLQSLC*RTQNTH Trigger: ATGAGTATTTTGAGTTCTGCAGCACAATGACTGTAG...ATAAAATGAAGGACTAGGCAAGTATTTCATGTTGTGTGAGTGGACTTCGGTTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| 3UTR-3UTR CCA 90 bp | AACTCAAGCTGTCCAAAACCTAGAGTACTAATAATTTCATGTTCAACAGAGTCACTACTCACTGTGTCTTaGACCAACCAATACACGTCT | + |
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Preference number: 2 (lower is better) Translates to: NSSCPKPRVLIISCSTESLLTVS*TNQYTS Trigger: AGACGTGTATTGGTTGGTCCAAGACACAGTGAGTAG...TGACTCTGTTGAACATGAAATTATTAGTACTCTAGGTTTTGGACAGCTTGAGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| 3UTR-3UTR TCA 90 bp | TTTTGCGTTAGCCACAGAGAGTGGACTTGTTTAGAATGTAAAAGTATTTATCTCATGTTGAAAGAAAAGTaGAAACACAGCCAGGCATGG | + |
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Preference number: 2 (lower is better) Translates to: FCVSHREWTCLECKSIYLMLKEK*KHSQAW Trigger: CCATGCCTGGCTGTGTTTTCACTTTTCTTTCAACAT...GAGATAAATACTTTTACATTCTAAACAAGTCCACTCTCTGTGGCTAACGCAAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| 3UTR-3UTR CCA 90 bp | TTTTGCGTTAGCCACAGAGAGTGGACTTGTTTAGAATGTAAAAGTATTTATCTCCCTGATAGACTGGTTTaGGTGTGCAATATTAATGCA | + |
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Preference number: 2 (lower is better) Translates to: FCVSHREWTCLECKSIYLPDRLV*VCNINA Trigger: TGCATTAATATTGCACACCCAAACCAGTCTATCAGG...GAGATAAATACTTTTACATTCTAAACAAGTCCACTCTCTGTGGCTAACGCAAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| 3UTR-3UTR CAA 90 bp | CTCACAGCCATGTTAACTGGGGGCCACTCCCTGCTGCCGTACCATCATATGAATTGGATCACTAGAAGGTaGCAGCTTCCATTAAAGAGG | + |
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Preference number: 3 (lower is better) Translates to: LTAMLTGGHSLLPYHHMNWITRR*QLPLKR Trigger: CCTCTTTAATGGAAGCTGCAACCTTCTAGTGATCCA...ATTCATATGATGGTACGGCAGCAGGGAGTGGCCCCCAGTTAACATGGCTGTGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| 3UTR CCA 72 bp | TCACACTGCGCCCTTGCTTCAGCCTCCCTGATAGACTaGTTTGGGTGTGCAATATTAATGCAGGAATACGTG | + |
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Preference number: 3 (lower is better) Translates to: SHCALASASLID*FGCAILMQEYV Trigger: CACGTATTCCTGCATTAATATTGCACACCCAAACCAGTCTATCAGGGAGGCTGAAGCAAGGGCGCAGTGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| 3UTR TCA 72 bp | CTTAACAACGCACTTACAAGCCATCATAACATGCAGTaGTCCTGCGAGACACTGTGTCCACTCACAGCCATG | + |
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Preference number: 3 (lower is better) Translates to: LNNALTSHHNMQ*SCETLCPLTAM Trigger: CATGGCTGTGAGTGGACACAGTGTCTCGCAGGATCACTGCATGTTATGATGGCTTGTAAGTGCGTTGTTAAG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| 3UTR CCA 72 bp | CTGCGCCCTTGCTTCAGCCTCCCTGATAGACTGGTTTaGGTGTGCAATATTAATGCAGGAATACGTGGAATA | + |
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Preference number: 3 (lower is better) Translates to: LRPCFSLPDRLV*VCNINAGIRGI Trigger: TATTCCACGTATTCCTGCATTAATATTGCACACCCAAACCAGTCTATCAGGGAGGCTGAAGCAAGGGCGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| 3UTR GCA 72 bp | CCTTGCTTCAGCCTCCCTGATAGACTGGTTTGGGTGTaGAATATTAATGCAGGAATACGTGGAATACCAGCA | + |
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Preference number: 3 (lower is better) Translates to: PCFSLPDRLVWV*NINAGIRGIPA Trigger: TGCTGGTATTCCACGTATTCCTGCATTAATATTGCACACCCAAACCAGTCTATCAGGGAGGCTGAAGCAAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| 3UTR GCA 72 bp | GCCTGGTTAACTGAGGTAGACTCTGGGAATTACACGTaGAAAGAGTCAGGTTTTCCAAAGGGCGATATTTTG | + |
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Preference number: 3 (lower is better) Translates to: AWLTEVDSGNYT*KESGFPKGDIL Trigger: CAAAATATCGCCCTTTGGAAAACCTGACTCTTTGCACGTGTAATTCCCAGAGTCTACCTCAGTTAACCAGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| 3UTR GCA 72 bp | AAAGTCTTAACAACGCACTTACAAGCCATCATAACATaGAGTGATCCTGCGAGACACTGTGTCCACTCACAG | + |
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Preference number: 3 (lower is better) Translates to: KVLTTHLQAIIT*SDPARHCVHSQ Trigger: CTGTGAGTGGACACAGTGTCTCGCAGGATCACTGCATGTTATGATGGCTTGTAAGTGCGTTGTTAAGACTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| 3UTR CCA 72 bp | TACTTGCCTAGTCCTTCATTTTATCTCAAGTTAGGGTaGGGGGAAAGTGAATCACAGCTACCTCAGCTGGTT | + |
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Preference number: 3 (lower is better) Translates to: YLPSPSFYLKLG*GESESQLPQLV Trigger: AACCAGCTGAGGTAGCTGTGATTCACTTTCCCCCCACCCTAACTTGAGATAAAATGAAGGACTAGGCAAGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| 3UTR TCA 72 bp | ACTGTGTCTTGGACCAACCAATACACGTCTACAGAATaGAGGGACTATCTGATCAGATATCTGCAAAGCAGA | + |
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Preference number: 3 (lower is better) Translates to: TVSWTNQYTSTE*RDYLIRYLQSR Trigger: TCTGCTTTGCAGATATCTGATCAGATAGTCCCTTCATTCTGTAGACGTGTATTGGTTGGTCCAAGACACAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| 3UTR-3UTR CAA 90 bp | ATCTGGCATCTTATAATCTGTGTCTCAGAAAGAAGGGCAATTTACAGCATCAGAGATAGGTCCCTCATGTaGACAGAGCACAGAATTGGA | + |
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Preference number: 3 (lower is better) Translates to: IWHLIICVSERRAIYSIRDRSLM*TEHRIG Trigger: TCCAATTCTGTGCTCTGTCAACATGAGGGACCTATC...TCTGATGCTGTAAATTGCCCTTCTTTCTGAGACACAGATTATAAGATGCCAGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| 3UTR TCA 72 bp | GGTTGTACACACACATTTTCCCCTGATGTATGTGTATaGCTGTCCATAGATTCACCAGGTATTGGTTTGCTT | + |
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Preference number: 3 (lower is better) Translates to: GCTHTFSPDVCV*LSIDSPGIGLL Trigger: AAGCAAACCAATACCTGGTGAATCTATGGACAGTCATACACATACATCAGGGGAAAATGTGTGTGTACAACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| 3UTR-3UTR CAA 90 bp | AACTCAAGCTGTCCAAAACCTAGAGTACTAATAATTTCATGTTCAACAGAGTCACCTACTCACTGTGTCTaGGACCAACCAATACACGTC | + |
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Preference number: 3 (lower is better) Translates to: NSSCPKPRVLIISCSTESPTHCV*DQPIHV Trigger: GACGTGTATTGGTTGGTCCAAGACACAGTGAGTAGG...TGACTCTGTTGAACATGAAATTATTAGTACTCTAGGTTTTGGACAGCTTGAGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| 3UTR TCA 72 bp | TACTGTAAATTTGGGTTGTACACACACATTTTCCCCTaGTGTATGTGTATGACTGTCCATAGATTCACCAGG | + |
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Preference number: 3 (lower is better) Translates to: YCKFGLYTHIFP*CMCMTVHRFTR Trigger: CCTGGTGAATCTATGGACAGTCATACACATACATCAGGGGAAAATGTGTGTGTACAACCCAAATTTACAGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| 3UTR TCA 72 bp | TGTGTCTCAGAAAGAAGGGCAATTTACAGCATCAGATaGATACTGGAGTTTAGGTCAGACTTAAGTTATCTG | + |
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Preference number: 3 (lower is better) Translates to: CVSERRAIYSIR*ILEFRSDLSYL Trigger: CAGATAACTTAAGTCTGACCTAAACTCCAGTATTCATCTGATGCTGTAAATTGCCCTTCTTTCTGAGACACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| 3UTR TCA 72 bp | ACAATACTGAAGGAACCGAAGTCCACTCACACAACATaGAATACTTGCCTAGTCCTTCATTTTATCTCAAGT | + |
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Preference number: 3 (lower is better) Translates to: TILKEPKSTHTT*NTCLVLHFISS Trigger: ACTTGAGATAAAATGAAGGACTAGGCAAGTATTTCATGTTGTGTGAGTGGACTTCGGTTCCTTCAGTATTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| 3UTR TCA 72 bp | TCCATAGATTCACCAGGTATTGGTTTGCTTACTTTTTaGGTAATTCGTGCTTTCAGCCTATGTTTTGAGAGT | + |
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Preference number: 3 (lower is better) Translates to: SIDSPGIGLLTF*VIRAFSLCFES Trigger: ACTCTCAAAACATAGGCTGAAAGCACGAATTACTCAAAAAGTAAGCAAACCAATACCTGGTGAATCTATGGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| 3UTR CCA 72 bp | TGTATGTGTATGACTGTCCATAGATTCACCAGGTATTaGTTTGCTTACTTTTTGAGTAATTCGTGCTTTCAG | + |
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Preference number: 3 (lower is better) Translates to: CMCMTVHRFTRY*FAYFLSNSCFQ Trigger: CTGAAAGCACGAATTACTCAAAAAGTAAGCAAACCAATACCTGGTGAATCTATGGACAGTCATACACATACA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| CDS-3UTR TCA 90 bp | CTCACAGCCATGTTAACTGGGGGCCACTCCCTGCTGCCGTACCATCATATGAATGGAGCGCGGGGGCTGTaGGTCCGCTCTGGGGCGGAG | + |
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Preference number: 4 (lower is better) Translates to: LTAMLTGGHSLLPYHHMNGARGL*VRSGAE Trigger: CTCCGCCCCAGAGCGGACTCACAGCCCCCGCGCTCC...ATTCATATGATGGTACGGCAGCAGGGAGTGGCCCCCAGTTAACATGGCTGTGAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| CDS-3UTR TCA 90 bp | GCTCCTACTCACTGTGTCTTGGACCAACCAATACACGTCTACAGAATGAAGGGAAGCTCGCGACGTGCGTaGAAAGGCGGCGGCGGCGTA | + |
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Preference number: 4 (lower is better) Translates to: APTHCVLDQPIHVYRMKGSSRRA*KGGGGV Trigger: TACGCCGCCGCCGCCTTTTCACGCACGTCGCGAGCT...TCCCTTCATTCTGTAGACGTGTATTGGTTGGTCCAAGACACAGTGAGTAGGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| CDS-3UTR TCA 90 bp | CTCACAGCCATGTTAACTGGGGGCCACTCCCTGCTGCCGTACCATCATATGAATACTACACAGCCTGGGTaGCACAGACTCCTTCACGCA | + |
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Preference number: 4 (lower is better) Translates to: LTAMLTGGHSLLPYHHMNTTQPG*HRLLHA Trigger: TGCGTGAAGGAGTCTGTGTCACCCAGGCTGTGTAGT...ATTCATATGATGGTACGGCAGCAGGGAGTGGCCCCCAGTTAACATGGCTGTGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| CDS-3UTR CCA 90 bp | GTGTGCAATATTAATGCAGGAATACGTGGAATACCAGCACAAAGCCGGGGAGGGCACAGCCATGTTAACTaGGGGCCACTCCCTGCTGCC | + |
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Preference number: 4 (lower is better) Translates to: VCNINAGIRGIPAQSRGGHSHVN*GPLPAA Trigger: GGCAGCAGGGAGTGGCCCCCAGTTAACATGGCTGTG...CCCTCCCCGGCTTTGTGCTGGTATTCCACGTATTCCTGCATTAATATTGCACAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| CDS-3UTR GCA 90 bp | GTGTGCAATATTAATGCAGGAATACGTGGAATACCAGCACAAAGCCGGGGAGGGTGGAGCTCTGTGTTCTaGAGGAACAGGGGGTGGCCA | + |
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Preference number: 4 (lower is better) Translates to: VCNINAGIRGIPAQSRGGWSSVF*RNRGWP Trigger: TGGCCACCCCCTGTTCCTGCAGAACACAGAGCTCCA...CCCTCCCCGGCTTTGTGCTGGTATTCCACGTATTCCTGCATTAATATTGCACAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| CDS-3UTR TCA 90 bp | CTTTGTCTTGGTCCACAGAGCTCCTACTCACTGTGTCTTGGACCAACCAATACAGACTGGCAATGTCTCTaGATCTGCTGCATCACCCCC | + |
|
Preference number: 4 (lower is better) Translates to: LCLGPQSSYSLCLGPTNTDWQCL*ICCITP Trigger: GGGGGTGATGCAGCAGATTCAGAGACATTGCCAGTC...TGTATTGGTTGGTCCAAGACACAGTGAGTAGGAGCTCTGTGGACCAAGACAAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| CDS-3UTR GCA 90 bp | CTCACAGCCATGTTAACTGGGGGCCACTCCCTGCTGCCGTACCATCATATGAATTCCTGCCGAACCTGTTaGCATTTGCCTTTGATAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LTAMLTGGHSLLPYHHMNSCRTC*HLPLIA Trigger: AGCTATCAAAGGCAAATGGCAACAGGTTCGGCAGGA...ATTCATATGATGGTACGGCAGCAGGGAGTGGCCCCCAGTTAACATGGCTGTGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| CDS-3UTR CCA 90 bp | CATAGATTCACCAGGTATTGGTTTGCTTACTTTTTGAGTAATTCGTGCTTTCAGGGCGTAGTGTTGCCATaGCAGCCGCGGCCGCGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: HRFTRYWFAYFLSNSCFQGVVLP*QPRPRG Trigger: ACCGCGCGGCCGCGGCTGCCATGGCAACACTACGCC...CTGAAAGCACGAATTACTCAAAAAGTAAGCAAACCAATACCTGGTGAATCTATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| CDS-3UTR GCA 90 bp | GGAACCGAAGTCCACTCACACAACATGAAATACTTGCCTAGTCCTTCATTTTATGGGCACATTCAGCGATaGGGTCCAGATGGGGTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: GTEVHSHNMKYLPSPSFYGHIQR*GPDGVR Trigger: CCGCACCCCATCTGGACCGCATCGCTGAATGTGCCC...ATAAAATGAAGGACTAGGCAAGTATTTCATGTTGTGTGAGTGGACTTCGGTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| CDS-3UTR CCA 90 bp | AGCAAACTCTCGCCATCAATTATTTCTCAACTACATTTAGTATTCTTCGCAGTTGCGATGCGGTCCAGATaGGGTGCGGGTGGGGCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SKLSPSIISQLHLVFFAVAMRSR*GAGGAQ Trigger: CTGCGCCCCACCCGCACCCCATCTGGACCGCATCGC...AACTGCGAAGAATACTAAATGTAGTTGAGAAATAATTGATGGCGAGAGTTTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| CDS-3UTR TCA 90 bp | CTTTGTCTTGGTCCACAGAGCTCCTACTCACTGTGTCTTGGACCAACCAATACAGCCTGGCCAACATGGTaGAACTCTGCCTCTACTAAA | + |
|
Preference number: 4 (lower is better) Translates to: LCLGPQSSYSLCLGPTNTAWPTW*NSASTK Trigger: TTTAGTAGAGGCAGAGTTTCACCATGTTGGCCAGGC...TGTATTGGTTGGTCCAAGACACAGTGAGTAGGAGCTCTGTGGACCAAGACAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| CDS-3UTR TCA 90 bp | CTCACAGCCATGTTAACTGGGGGCCACTCCCTGCTGCCGTACCATCATATGAATACACACATTTTCCCCTaGTGTATGTGTATGACTGTC | + |
|
Preference number: 4 (lower is better) Translates to: LTAMLTGGHSLLPYHHMNTHIFP*CMCMTV Trigger: GACAGTCATACACATACATCAGGGGAAAATGTGTGT...ATTCATATGATGGTACGGCAGCAGGGAGTGGCCCCCAGTTAACATGGCTGTGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| CDS-3UTR GCA 90 bp | CTTTGTCTTGGTCCACAGAGCTCCTACTCACTGTGTCTTGGACCAACCAATACACCTAAAATATCACACTaGGCCCTTGCTTCAGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LCLGPQSSYSLCLGPTNTPKISH*ALASAS Trigger: GGAGGCTGAAGCAAGGGCGCAGTGTGATATTTTAGG...TGTATTGGTTGGTCCAAGACACAGTGAGTAGGAGCTCTGTGGACCAAGACAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| CDS-3UTR CCA 90 bp | CTTTGTCTTGGTCCACAGAGCTCCTACTCACTGTGTCTTGGACCAACCAATACAAGTTTTACCAGTGCCTaGGGGTCCAACCATCAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: LCLGPQSSYSLCLGPTNTSFTSA*GSNHQY Trigger: GTACTGATGGTTGGACCCCCAGGCACTGGTAAAACT...TGTATTGGTTGGTCCAAGACACAGTGAGTAGGAGCTCTGTGGACCAAGACAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| CDS-3UTR TCA 90 bp | GGAACCGAAGTCCACTCACACAACATGAAATACTTGCCTAGTCCTTCATTTTATCTCGATTGGGACGCCTaGTCTGAGGTGGAGCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: GTEVHSHNMKYLPSPSFYLDWDA*SEVELC Trigger: ACAGAGCTCCACCTCAGATCAGGCGTCCCAATCGAG...ATAAAATGAAGGACTAGGCAAGTATTTCATGTTGTGTGAGTGGACTTCGGTTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| CDS-3UTR TCA 90 bp | CTTTGTCTTGGTCCACAGAGCTCCTACTCACTGTGTCTTGGACCAACCAATACAGCATCTACCATCCACTaGCAGGGCAAAATGAGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: LCLGPQSSYSLCLGPTNTASTIH*QGKMRN Trigger: GTTTCTCATTTTGCCCTGTCAGTGGATGGTAGATGC...TGTATTGGTTGGTCCAAGACACAGTGAGTAGGAGCTCTGTGGACCAAGACAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| CDS-3UTR CCA 90 bp | GCTCCTACTCACTGTGTCTTGGACCAACCAATACACGTCTACAGAATGAAGGGAAAGGTGGCCTTTTCTTaGAAAAGGCCAGCATTCACC | + |
|
Preference number: 4 (lower is better) Translates to: APTHCVLDQPIHVYRMKGKVAFS*KRPAFT Trigger: GGTGAATGCTGGCCTTTTCCAAGAAAAGGCCACCTT...TCCCTTCATTCTGTAGACGTGTATTGGTTGGTCCAAGACACAGTGAGTAGGAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| CDS-3UTR TCA 90 bp | GTGTGCAATATTAATGCAGGAATACGTGGAATACCAGCACAAAGCCGGGGAGGGATGTTGAAAGAAAAGTaGAAACACAGCCAGGCATGG | + |
|
Preference number: 4 (lower is better) Translates to: VCNINAGIRGIPAQSRGGMLKEK*KHSQAW Trigger: CCATGCCTGGCTGTGTTTTCACTTTTCTTTCAACAT...CCCTCCCCGGCTTTGTGCTGGTATTCCACGTATTCCTGCATTAATATTGCACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| CDS-3UTR TCA 90 bp | GTGTGCAATATTAATGCAGGAATACGTGGAATACCAGCACAAAGCCGGGGAGGGCCTGATGTATGTGTATaGCTGTCCATAGATTCACCA | + |
|
Preference number: 4 (lower is better) Translates to: VCNINAGIRGIPAQSRGGPDVCV*LSIDSP Trigger: TGGTGAATCTATGGACAGTCATACACATACATCAGG...CCCTCCCCGGCTTTGTGCTGGTATTCCACGTATTCCTGCATTAATATTGCACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| 3UTR CAA 72 bp | TTTGTCTTGGTCCACAGAGCTCCTACTCACTGTGTCTaGGACCAACCAATACACGTCTACAGAATGAAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: FVLVHRAPTHCV*DQPIHVYRMKG Trigger: TCCCTTCATTCTGTAGACGTGTATTGGTTGGTCCAAGACACAGTGAGTAGGAGCTCTGTGGACCAAGACAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| CDS-3UTR TCA 90 bp | ATCTGGCATCTTATAATCTGTGTCTCAGAAAGAAGGGCAATTTACAGCATCAGATTGGGACGCCTGATCTaGGGTGGAGCTCTGTGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: IWHLIICVSERRAIYSIRLGRLI*GGALCS Trigger: AGAACACAGAGCTCCACCTCAGATCAGGCGTCCCAA...TCTGATGCTGTAAATTGCCCTTCTTTCTGAGACACAGATTATAAGATGCCAGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| CDS-3UTR TCA 90 bp | GCTCCTACTCACTGTGTCTTGGACCAACCAATACACGTCTACAGAATGAAGGGATACACGTCTACAGAATaGAGGGACTATCTGATCAGA | + |
|
Preference number: 4 (lower is better) Translates to: APTHCVLDQPIHVYRMKGYTSTE*RDYLIR Trigger: TCTGATCAGATAGTCCCTTCATTCTGTAGACGTGTA...TCCCTTCATTCTGTAGACGTGTATTGGTTGGTCCAAGACACAGTGAGTAGGAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| CDS-3UTR GCA 90 bp | CTTTGTCTTGGTCCACAGAGCTCCTACTCACTGTGTCTTGGACCAACCAATACACTCAGCTCTTCCTTTTaGTGTTGGGAGAGGTATATA | + |
|
Preference number: 4 (lower is better) Translates to: LCLGPQSSYSLCLGPTNTLSSSF*CWERYI Trigger: TATATACCTCTCCCAACAGCAAAAGGAAGAGCTGAG...TGTATTGGTTGGTCCAAGACACAGTGAGTAGGAGCTCTGTGGACCAAGACAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| CDS-3UTR GCA 90 bp | GTGTGCAATATTAATGCAGGAATACGTGGAATACCAGCACAAAGCCGGGGAGGGTTCCTCTTTAGAAAGTaGACGGATTTCTTCTGGACT | + |
|
Preference number: 4 (lower is better) Translates to: VCNINAGIRGIPAQSRGGFLFRK*TDFFWT Trigger: AGTCCAGAAGAAATCCGTGCACTTTCTAAAGAGGAA...CCCTCCCCGGCTTTGTGCTGGTATTCCACGTATTCCTGCATTAATATTGCACAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| CDS-3UTR GCA 90 bp | CTTTGTCTTGGTCCACAGAGCTCCTACTCACTGTGTCTTGGACCAACCAATACATCTGGGAATTACACGTaGAAAGAGTCAGGTTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LCLGPQSSYSLCLGPTNTSGNYT*KESGFP Trigger: TGGAAAACCTGACTCTTTGCACGTGTAATTCCCAGA...TGTATTGGTTGGTCCAAGACACAGTGAGTAGGAGCTCTGTGGACCAAGACAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| CDS-3UTR CCA 90 bp | GTGTGCAATATTAATGCAGGAATACGTGGAATACCAGCACAAAGCCGGGGAGGGCCTGATAGACTGGTTTaGGTGTGCAATATTAATGCA | + |
|
Preference number: 4 (lower is better) Translates to: VCNINAGIRGIPAQSRGGPDRLV*VCNINA Trigger: TGCATTAATATTGCACACCCAAACCAGTCTATCAGG...CCCTCCCCGGCTTTGTGCTGGTATTCCACGTATTCCTGCATTAATATTGCACAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| CDS-3UTR TCA 90 bp | ATCTGGCATCTTATAATCTGTGTCTCAGAAAGAAGGGCAATTTACAGCATCAGACGACCTCACGAAGGTTaGTCTTCAGAAGCTCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: IWHLIICVSERRAIYSIRRPHEG*SSEAQL Trigger: GAGCTGAGCTTCTGAAGATCAACCTTCGTGAGGTCG...TCTGATGCTGTAAATTGCCCTTCTTTCTGAGACACAGATTATAAGATGCCAGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| CDS-3UTR TCA 90 bp | GTGTGCAATATTAATGCAGGAATACGTGGAATACCAGCACAAAGCCGGGGAGGGGCTATATCTTCCAGTTaGATATCAGGATCTAATTCG | + |
|
Preference number: 4 (lower is better) Translates to: VCNINAGIRGIPAQSRGGAISSS*ISGSNS Trigger: CGAATTAGATCCTGATATTCAACTGGAAGATATAGC...CCCTCCCCGGCTTTGTGCTGGTATTCCACGTATTCCTGCATTAATATTGCACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| CDS-3UTR TCA 90 bp | GGAACCGAAGTCCACTCACACAACATGAAATACTTGCCTAGTCCTTCATTTTATCTGGACTTAAGCCATTaGTACGCCGTCTCATTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GTEVHSHNMKYLPSPSFYLDLSH*YAVSLP Trigger: TGGCAATGAGACGGCGTATCAATGGCTTAAGTCCAG...ATAAAATGAAGGACTAGGCAAGTATTTCATGTTGTGTGAGTGGACTTCGGTTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| CDS-3UTR TCA 90 bp | GCTCCTACTCACTGTGTCTTGGACCAACCAATACACGTCTACAGAATGAAGGGATTGGTAACAGGCATCTaGAGTTCCTCTTTAGAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: APTHCVLDQPIHVYRMKGLVTGI*SSSLES Trigger: ACTTTCTAAAGAGGAACTTCAGATGCCTGTTACCAA...TCCCTTCATTCTGTAGACGTGTATTGGTTGGTCCAAGACACAGTGAGTAGGAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| CDS-3UTR TCA 90 bp | CTTTGTCTTGGTCCACAGAGCTCCTACTCACTGTGTCTTGGACCAACCAATACAGGTTTGCTTACTTTTTaGGTAATTCGTGCTTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LCLGPQSSYSLCLGPTNTGLLTF*VIRAFS Trigger: GCTGAAAGCACGAATTACTCAAAAAGTAAGCAAACC...TGTATTGGTTGGTCCAAGACACAGTGAGTAGGAGCTCTGTGGACCAAGACAAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| CDS-3UTR GCA 90 bp | CTTTGTCTTGGTCCACAGAGCTCCTACTCACTGTGTCTTGGACCAACCAATACAAGCTTCTTCCAGATCTaGTATGTCATCCCAATGAAT | + |
|
Preference number: 4 (lower is better) Translates to: LCLGPQSSYSLCLGPTNTSFFQI*YVIPMN Trigger: ATTCATTGGGATGACATAGCAGATCTGGAAGAAGCT...TGTATTGGTTGGTCCAAGACACAGTGAGTAGGAGCTCTGTGGACCAAGACAAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| CDS-3UTR GCA 90 bp | ATCTGGCATCTTATAATCTGTGTCTCAGAAAGAAGGGCAATTTACAGCATCAGAATCACACTGCGCCCTTaGTTCAGCCTCCCTGATAGA | + |
|
Preference number: 4 (lower is better) Translates to: IWHLIICVSERRAIYSIRITLRP*FSLPDR Trigger: TCTATCAGGGAGGCTGAAGCAAGGGCGCAGTGTGAT...TCTGATGCTGTAAATTGCCCTTCTTTCTGAGACACAGATTATAAGATGCCAGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| CDS-3UTR GCA 90 bp | GCTCCTACTCACTGTGTCTTGGACCAACCAATACACGTCTACAGAATGAAGGGAAGATTTCATTTGTTTTaGGTTAGCCACAGAGAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: APTHCVLDQPIHVYRMKGRFHLF*VSHREW Trigger: CCACTCTCTGTGGCTAACGCAAAACAAATGAAATCT...TCCCTTCATTCTGTAGACGTGTATTGGTTGGTCCAAGACACAGTGAGTAGGAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| CDS-3UTR CCA 90 bp | GCTCCTACTCACTGTGTCTTGGACCAACCAATACACGTCTACAGAATGAAGGGAGGACACAGGGAAATCTaGAGGCTTGTCAATTTTAAA | + |
|
Preference number: 4 (lower is better) Translates to: APTHCVLDQPIHVYRMKGGHREI*RLVNFK Trigger: TTTAAAATTGACAAGCCTCCAGATTTCCCTGTGTCC...TCCCTTCATTCTGTAGACGTGTATTGGTTGGTCCAAGACACAGTGAGTAGGAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| CDS-3UTR CCA 90 bp | CTTTGTCTTGGTCCACAGAGCTCCTACTCACTGTGTCTTGGACCAACCAATACAAGCACCATCAAATTTTaGCATTTCACCATCACTTGC | + |
|
Preference number: 4 (lower is better) Translates to: LCLGPQSSYSLCLGPTNTSTIKF*HFTITC Trigger: GCAAGTGATGGTGAAATGCCAAAATTTGATGGTGCT...TGTATTGGTTGGTCCAAGACACAGTGAGTAGGAGCTCTGTGGACCAAGACAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| CDS-3UTR CCA 90 bp | GCTCCTACTCACTGTGTCTTGGACCAACCAATACACGTCTACAGAATGAAGGGACACAGCTACCTCAGCTaGTTAGTGTTTTATGATTCT | + |
|
Preference number: 4 (lower is better) Translates to: APTHCVLDQPIHVYRMKGHSYLS*LVFYDS Trigger: AGAATCATAAAACACTAACCAGCTGAGGTAGCTGTG...TCCCTTCATTCTGTAGACGTGTATTGGTTGGTCCAAGACACAGTGAGTAGGAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| CDS-3UTR CCA 90 bp | CTTTGTCTTGGTCCACAGAGCTCCTACTCACTGTGTCTTGGACCAACCAATACATCATACAAGTTAAGGTaGCCTTTTCTTGGAAAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LCLGPQSSYSLCLGPTNTSYKLR*PFLGKG Trigger: GCCTTTTCCAAGAAAAGGCCACCTTAACTTGTATGA...TGTATTGGTTGGTCCAAGACACAGTGAGTAGGAGCTCTGTGGACCAAGACAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| CDS-3UTR TCA 90 bp | GGAACCGAAGTCCACTCACACAACATGAAATACTTGCCTAGTCCTTCATTTTATAGGCTTTTCACTCTTTaGTATAGGATGTGCTCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GTEVHSHNMKYLPSPSFYRLFTL*YRMCSA Trigger: GGCCGAGCACATCCTATATCAAAGAGTGAAAAGCCT...ATAAAATGAAGGACTAGGCAAGTATTTCATGTTGTGTGAGTGGACTTCGGTTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| CDS-3UTR TCA 90 bp | GGAACCGAAGTCCACTCACACAACATGAAATACTTGCCTAGTCCTTCATTTTATCCAACTCCATCCATCTaGATGAGCAGTTCAGACTTG | + |
|
Preference number: 4 (lower is better) Translates to: GTEVHSHNMKYLPSPSFYPTPSI*MSSSDL Trigger: CAAGTCTGAACTGCTCATTCAGATGGATGGAGTTGG...ATAAAATGAAGGACTAGGCAAGTATTTCATGTTGTGTGAGTGGACTTCGGTTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| CDS-3UTR TCA 90 bp | AGCAAACTCTCGCCATCAATTATTTCTCAACTACATTTAGTATTCTTCGCAGTTAGGCAGAGGTTGCAGTaGGCCAAGATCAACCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: SKLSPSIISQLHLVFFAVRQRLQ*AKINHC Trigger: GCAGTGGTTGATCTTGGCTCACTGCAACCTCTGCCT...AACTGCGAAGAATACTAAATGTAGTTGAGAAATAATTGATGGCGAGAGTTTGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| CDS-3UTR TCA 90 bp | AACTCAAGCTGTCCAAAACCTAGAGTACTAATAATTTCATGTTCAACAGAGTCAAGGCAGAAGTTGCAGTaGGCCGAGATCATGCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: NSSCPKPRVLIISCSTESRQKLQ*AEIMPL Trigger: CAGTGGCATGATCTCGGCTCACTGCAACTTCTGCCT...TGACTCTGTTGAACATGAAATTATTAGTACTCTAGGTTTTGGACAGCTTGAGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| CDS-3UTR TCA 90 bp | GGAACCGAAGTCCACTCACACAACATGAAATACTTGCCTAGTCCTTCATTTTATCATCATAACATGCAGTaGTCCTGCGAGACACTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: GTEVHSHNMKYLPSPSFYHHNMQ*SCETLC Trigger: ACACAGTGTCTCGCAGGATCACTGCATGTTATGATG...ATAAAATGAAGGACTAGGCAAGTATTTCATGTTGTGTGAGTGGACTTCGGTTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| CDS-3UTR GCA 90 bp | GCTCCTACTCACTGTGTCTTGGACCAACCAATACACGTCTACAGAATGAAGGGAACAAACAGATTACTATaGCTCTCCATCAGTGATCTA | + |
|
Preference number: 4 (lower is better) Translates to: APTHCVLDQPIHVYRMKGTNRLL*LSISDL Trigger: TAGATCACTGATGGAGAGGCATAGTAATCTGTTTGT...TCCCTTCATTCTGTAGACGTGTATTGGTTGGTCCAAGACACAGTGAGTAGGAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| CDS-3UTR CCA 90 bp | TTTTGCGTTAGCCACAGAGAGTGGACTTGTTTAGAATGTAAAAGTATTTATCTCTGCAGGAACAGGGGGTaGCCAAACAGCAGGATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: FCVSHREWTCLECKSIYLCRNRG*PNSRIS Trigger: AGAGATCCTGCTGTTTGGCCACCCCCTGTTCCTGCA...GAGATAAATACTTTTACATTCTAAACAAGTCCACTCTCTGTGGCTAACGCAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| CDS-3UTR CCA 90 bp | AACTCAAGCTGTCCAAAACCTAGAGTACTAATAATTTCATGTTCAACAGAGTCAACGCCTGATCTGAGGTaGAGCTCTGTGTTCTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: NSSCPKPRVLIISCSTESTPDLR*SSVFCR Trigger: CCTGCAGAACACAGAGCTCCACCTCAGATCAGGCGT...TGACTCTGTTGAACATGAAATTATTAGTACTCTAGGTTTTGGACAGCTTGAGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380615.8 |
||
| CDS-3UTR CCA 90 bp | GGAACCGAAGTCCACTCACACAACATGAAATACTTGCCTAGTCCTTCATTTTATGTCAGGCATCCACATTaGAAGAACAACAGCTTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: GTEVHSHNMKYLPSPSFYVRHPH*KNNSFP Trigger: AGGGAAGCTGTTGTTCTTCCAATGTGGATGCCTGAC...ATAAAATGAAGGACTAGGCAAGTATTTCATGTTGTGTGAGTGGACTTCGGTTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380615.8 |
||
| CDS-3UTR CCA 90 bp | GCTCCTACTCACTGTGTCTTGGACCAACCAATACACGTCTACAGAATGAAGGGATCTTCCTTTTGCTGTTaGGAGAGGTATATATATCCT | + |
|
Preference number: 4 (lower is better) Translates to: APTHCVLDQPIHVYRMKGSSFCC*ERYIYP Trigger: AGGATATATATACCTCTCCCAACAGCAAAAGGAAGA...TCCCTTCATTCTGTAGACGTGTATTGGTTGGTCCAAGACACAGTGAGTAGGAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380615.8 |
||
| 3UTR CAA 72 bp | GAAGGAACCGAAGTCCACTCACACAACATGAAATACTaGCCTAGTCCTTCATTTTATCTCAAGTTAGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: EGTEVHSHNMKY*PSPSFYLKLGW Trigger: CCACCCTAACTTGAGATAAAATGAAGGACTAGGCAAGTATTTCATGTTGTGTGAGTGGACTTCGGTTCCTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380615.8 |
||
| CDS-3UTR CCA 90 bp | TTTTGCGTTAGCCACAGAGAGTGGACTTGTTTAGAATGTAAAAGTATTTATCTCCTGCACTACACAGCCTaGGTGACACAGACTCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: FCVSHREWTCLECKSIYLLHYTA*VTQTPS Trigger: TGAAGGAGTCTGTGTCACCCAGGCTGTGTAGTGCAG...GAGATAAATACTTTTACATTCTAAACAAGTCCACTCTCTGTGGCTAACGCAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000380615.8 |
||
| CDS-3UTR TCA 90 bp | GGAACCGAAGTCCACTCACACAACATGAAATACTTGCCTAGTCCTTCATTTTATATGCCTCTCCATCAGTaGTCTAAACTCTTGTTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: GTEVHSHNMKYLPSPSFYMPLHQ*SKLLFQ Trigger: CTGAAACAAGAGTTTAGATCACTGATGGAGAGGCAT...ATAAAATGAAGGACTAGGCAAGTATTTCATGTTGTGTGAGTGGACTTCGGTTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380615.8 |
||
| CDS-3UTR GCA 90 bp | AACTCAAGCTGTCCAAAACCTAGAGTACTAATAATTTCATGTTCAACAGAGTCACTTGACCCTGCGACTTaGCTCATGTTCATCAGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: NSSCPKPRVLIISCSTESLDPAT*LMFIRG Trigger: ACCTCTGATGAACATGAGGCAAGTCGCAGGGTCAAG...TGACTCTGTTGAACATGAAATTATTAGTACTCTAGGTTTTGGACAGCTTGAGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| CDS-3UTR GCA 90 bp | ATCTGGCATCTTATAATCTGTGTCTCAGAAAGAAGGGCAATTTACAGCATCAGACTGAGACAGGAGAATTaGTTGAATCTAGGAGGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: IWHLIICVSERRAIYSIRLRQEN*LNLGGR Trigger: TCTGCCTCCTAGATTCAAGCAATTCTCCTGTCTCAG...TCTGATGCTGTAAATTGCCCTTCTTTCTGAGACACAGATTATAAGATGCCAGAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| CDS-3UTR GCA 90 bp | CATAGATTCACCAGGTATTGGTTTGCTTACTTTTTGAGTAATTCGTGCTTTCAGCAAGCCATCATAACATaGAGTGATCCTGCGAGACAC | + |
|
Preference number: 4 (lower is better) Translates to: HRFTRYWFAYFLSNSCFQQAIIT*SDPARH Trigger: GTGTCTCGCAGGATCACTGCATGTTATGATGGCTTG...CTGAAAGCACGAATTACTCAAAAAGTAAGCAAACCAATACCTGGTGAATCTATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| CDS-3UTR CCA 90 bp | ATCTGGCATCTTATAATCTGTGTCTCAGAAAGAAGGGCAATTTACAGCATCAGACTACTCACTGTGTCTTaGACCAACCAATACACGTCT | + |
|
Preference number: 4 (lower is better) Translates to: IWHLIICVSERRAIYSIRLLTVS*TNQYTS Trigger: AGACGTGTATTGGTTGGTCCAAGACACAGTGAGTAG...TCTGATGCTGTAAATTGCCCTTCTTTCTGAGACACAGATTATAAGATGCCAGAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| CDS-3UTR CCA 90 bp | AGCAAACTCTCGCCATCAATTATTTCTCAACTACATTTAGTATTCTTCGCAGTTAGTCCAGCTTTGTCTTaGTCCACAGAGCTCCTACTC | + |
|
Preference number: 4 (lower is better) Translates to: SKLSPSIISQLHLVFFAVSPALS*STELLL Trigger: GAGTAGGAGCTCTGTGGACCAAGACAAAGCTGGACT...AACTGCGAAGAATACTAAATGTAGTTGAGAAATAATTGATGGCGAGAGTTTGCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| CDS-3UTR TCA 90 bp | ATCTGGCATCTTATAATCTGTGTCTCAGAAAGAAGGGCAATTTACAGCATCAGATCCACTCACACAACATaGAATACTTGCCTAGTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: IWHLIICVSERRAIYSIRSTHTT*NTCLVL Trigger: AAGGACTAGGCAAGTATTTCATGTTGTGTGAGTGGA...TCTGATGCTGTAAATTGCCCTTCTTTCTGAGACACAGATTATAAGATGCCAGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| CDS-3UTR TCA 90 bp | AACTCAAGCTGTCCAAAACCTAGAGTACTAATAATTTCATGTTCAACAGAGTCAGCTATGTCATCCCAATaGATGCTAGGATTCCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: NSSCPKPRVLIISCSTESAMSSQ*MLGFLD Trigger: ATCCAGGAATCCTAGCATTCATTGGGATGACATAGC...TGACTCTGTTGAACATGAAATTATTAGTACTCTAGGTTTTGGACAGCTTGAGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| CDS-3UTR TCA 90 bp | GGAACCGAAGTCCACTCACACAACATGAAATACTTGCCTAGTCCTTCATTTTATCAGAAATTAAAGAGCTaGCAGAAATTCAAGCAGATC | + |
|
Preference number: 4 (lower is better) Translates to: GTEVHSHNMKYLPSPSFYQKLKS*QKFKQI Trigger: GATCTGCTTGAATTTCTGTCAGCTCTTTAATTTCTG...ATAAAATGAAGGACTAGGCAAGTATTTCATGTTGTGTGAGTGGACTTCGGTTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| CDS-3UTR TCA 90 bp | AACTCAAGCTGTCCAAAACCTAGAGTACTAATAATTTCATGTTCAACAGAGTCAATAGGTCCCTCATGTTaGCAGAGCACAGAATTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: NSSCPKPRVLIISCSTESIGPSC*QSTELE Trigger: TTCCAATTCTGTGCTCTGTCAACATGAGGGACCTAT...TGACTCTGTTGAACATGAAATTATTAGTACTCTAGGTTTTGGACAGCTTGAGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| CDS-3UTR TCA 90 bp | ATCTGGCATCTTATAATCTGTGTCTCAGAAAGAAGGGCAATTTACAGCATCAGAGGCACTATTCGAAACTaGGAATTCAGGATGTTATCA | + |
|
Preference number: 4 (lower is better) Translates to: IWHLIICVSERRAIYSIRGTIRN*EFRMLS Trigger: TGATAACATCCTGAATTCTCAGTTTCGAATAGTGCC...TCTGATGCTGTAAATTGCCCTTCTTTCTGAGACACAGATTATAAGATGCCAGAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| CDS-3UTR TCA 90 bp | GGAACCGAAGTCCACTCACACAACATGAAATACTTGCCTAGTCCTTCATTTTATATTTACAGCATCAGATaGATACTGGAGTTTAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: GTEVHSHNMKYLPSPSFYIYSIR*ILEFRS Trigger: TGACCTAAACTCCAGTATTCATCTGATGCTGTAAAT...ATAAAATGAAGGACTAGGCAAGTATTTCATGTTGTGTGAGTGGACTTCGGTTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| CDS-3UTR TCA 90 bp | GGAACCGAAGTCCACTCACACAACATGAAATACTTGCCTAGTCCTTCATTTTATTGCTTTTTCCTATTGTaGCATATTCTCAGGTTCACA | + |
|
Preference number: 4 (lower is better) Translates to: GTEVHSHNMKYLPSPSFYCFFLL*HILRFT Trigger: TGTGAACCTGAGAATATGTCACAATAGGAAAAAGCA...ATAAAATGAAGGACTAGGCAAGTATTTCATGTTGTGTGAGTGGACTTCGGTTCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000380615.8 |
||
| CDS-3UTR GCA 90 bp | AGCAAACTCTCGCCATCAATTATTTCTCAACTACATTTAGTATTCTTCGCAGTTTCCTCCAATAATTCCTaGCGAACCTGTTGCCATTTG | + |
|
Preference number: 4 (lower is better) Translates to: SKLSPSIISQLHLVFFAVSSNNS*RTCCHL Trigger: CAAATGGCAACAGGTTCGGCAGGAATTATTGGAGGA...AACTGCGAAGAATACTAAATGTAGTTGAGAAATAATTGATGGCGAGAGTTTGCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| CDS-3UTR GCA 90 bp | GGAACCGAAGTCCACTCACACAACATGAAATACTTGCCTAGTCCTTCATTTTATTATGTTTGGAACTGCTaGTTTGAATGCAATACATCC | + |
|
Preference number: 4 (lower is better) Translates to: GTEVHSHNMKYLPSPSFYYVWNC*FECNTS Trigger: GGATGTATTGCATTCAAAGCAGCAGTTCCAAACATA...ATAAAATGAAGGACTAGGCAAGTATTTCATGTTGTGTGAGTGGACTTCGGTTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| CDS-3UTR CCA 90 bp | AACTCAAGCTGTCCAAAACCTAGAGTACTAATAATTTCATGTTCAACAGAGTCACAGTACACCCTTCCATaGCCTTCTAATCCCTTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: NSSCPKPRVLIISCSTESQYTLP*PSNPFE Trigger: TTCAAAGGGATTAGAAGGCCATGGAAGGGTGTACTG...TGACTCTGTTGAACATGAAATTATTAGTACTCTAGGTTTTGGACAGCTTGAGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| CDS-3UTR CCA 90 bp | TTTTGCGTTAGCCACAGAGAGTGGACTTGTTTAGAATGTAAAAGTATTTATCTCGCCTCCCTGATAGACTaGTTTGGGTGTGCAATATTA | + |
|
Preference number: 4 (lower is better) Translates to: FCVSHREWTCLECKSIYLASLID*FGCAIL Trigger: TAATATTGCACACCCAAACCAGTCTATCAGGGAGGC...GAGATAAATACTTTTACATTCTAAACAAGTCCACTCTCTGTGGCTAACGCAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| CDS-3UTR CCA 90 bp | GGAACCGAAGTCCACTCACACAACATGAAATACTTGCCTAGTCCTTCATTTTATGTTAGCCACAGAGAGTaGACTTGTTTAGAATGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: GTEVHSHNMKYLPSPSFYVSHRE*TCLECK Trigger: TTTACATTCTAAACAAGTCCACTCTCTGTGGCTAAC...ATAAAATGAAGGACTAGGCAAGTATTTCATGTTGTGTGAGTGGACTTCGGTTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| CDS-3UTR CCA 90 bp | AACTCAAGCTGTCCAAAACCTAGAGTACTAATAATTTCATGTTCAACAGAGTCATATCTCAAGTTAGGGTaGGGGGAAAGTGAATCACAG | + |
|
Preference number: 4 (lower is better) Translates to: NSSCPKPRVLIISCSTESYLKLG*GESESQ Trigger: CTGTGATTCACTTTCCCCCCACCCTAACTTGAGATA...TGACTCTGTTGAACATGAAATTATTAGTACTCTAGGTTTTGGACAGCTTGAGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| CDS-3UTR CCA 90 bp | GGAACCGAAGTCCACTCACACAACATGAAATACTTGCCTAGTCCTTCATTTTATCACAGAGGCCTTATTTaGAATACAAACACTTTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: GTEVHSHNMKYLPSPSFYHRGLI*NTNTLL Trigger: TAGCAAAGTGTTTGTATTCCAAATAAGGCCTCTGTG...ATAAAATGAAGGACTAGGCAAGTATTTCATGTTGTGTGAGTGGACTTCGGTTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| CDS-3UTR TCA 90 bp | AACTCAAGCTGTCCAAAACCTAGAGTACTAATAATTTCATGTTCAACAGAGTCACTAAATGGTTCATCTTaGCAGGACACAGGGAAATCT | + |
|
Preference number: 4 (lower is better) Translates to: NSSCPKPRVLIISCSTESLNGSS*QDTGKS Trigger: AGATTTCCCTGTGTCCTGTCAAGATGAACCATTTAG...TGACTCTGTTGAACATGAAATTATTAGTACTCTAGGTTTTGGACAGCTTGAGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| CDS-3UTR TCA 90 bp | CATAGATTCACCAGGTATTGGTTTGCTTACTTTTTGAGTAATTCGTGCTTTCAGAATGAAGGGACTATCTaGTCAGATATCTGCAAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: HRFTRYWFAYFLSNSCFQNEGTI*SDICKA Trigger: TGCTTTGCAGATATCTGATCAGATAGTCCCTTCATT...CTGAAAGCACGAATTACTCAAAAAGTAAGCAAACCAATACCTGGTGAATCTATG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| CDS-3UTR TCA 90 bp | TTTTGCGTTAGCCACAGAGAGTGGACTTGTTTAGAATGTAAAAGTATTTATCTCAGAAACTGCCAAGTTTaGACTGTACTCTCTAGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: FCVSHREWTCLECKSIYLRNCQV*TVLSSP Trigger: TGGACTAGAGAGTACAGTTCAAACTTGGCAGTTTCT...GAGATAAATACTTTTACATTCTAAACAAGTCCACTCTCTGTGGCTAACGCAAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| CDS-3UTR GCA 90 bp | GGAACCGAAGTCCACTCACACAACATGAAATACTTGCCTAGTCCTTCATTTTATAATTCAATTCATTCCTaGCTAAAACTAAGCCTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: GTEVHSHNMKYLPSPSFYNSIHS*LKLSLV Trigger: AACCAGGCTTAGTTTTAGGCAGGAATGAATTGAATT...ATAAAATGAAGGACTAGGCAAGTATTTCATGTTGTGTGAGTGGACTTCGGTTCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| CDS-3UTR CCA 90 bp | GGAACCGAAGTCCACTCACACAACATGAAATACTTGCCTAGTCCTTCATTTTATTTTCGAACAATCAAATaGGAGTCCTTTTATAAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GTEVHSHNMKYLPSPSFYFRTIK*ESFYKR Trigger: CCTCTTATAAAAGGACTCCCATTTGATTGTTCGAAA...ATAAAATGAAGGACTAGGCAAGTATTTCATGTTGTGTGAGTGGACTTCGGTTCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| CDS-3UTR TCA 90 bp | AGCAAACTCTCGCCATCAATTATTTCTCAACTACATTTAGTATTCTTCGCAGTTAAATACCACAGAGCGTaGGAATATTCCTCAGTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: SKLSPSIISQLHLVFFAVKYHRA*EYSSVK Trigger: CTTTACTGAGGAATATTCTCACGCTCTGTGGTATTT...AACTGCGAAGAATACTAAATGTAGTTGAGAAATAATTGATGGCGAGAGTTTGCT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| CDS-3UTR TCA 90 bp | TTTTGCGTTAGCCACAGAGAGTGGACTTGTTTAGAATGTAAAAGTATTTATCTCAGGAAGGAATTCAAATaGACTCAAGCTGTCCAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: FCVSHREWTCLECKSIYLRKEFK*TQAVQN Trigger: GTTTTGGACAGCTTGAGTTCATTTGAATTCCTTCCT...GAGATAAATACTTTTACATTCTAAACAAGTCCACTCTCTGTGGCTAACGCAAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| CDS-3UTR TCA 90 bp | AGCAAACTCTCGCCATCAATTATTTCTCAACTACATTTAGTATTCTTCGCAGTTCTGGGAGACAAACACTaGAACAAAAGTCTTAACAAC | + |
|
Preference number: 4 (lower is better) Translates to: SKLSPSIISQLHLVFFAVLGDKH*NKSLNN Trigger: GTTGTTAAGACTTTTGTTTCAGTGTTTGTCTCCCAG...AACTGCGAAGAATACTAAATGTAGTTGAGAAATAATTGATGGCGAGAGTTTGCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| CDS-3UTR GCA 90 bp | AACTCAAGCTGTCCAAAACCTAGAGTACTAATAATTTCATGTTCAACAGAGTCAGTCCTACAGTCATTGTaGTGCAGAACTCAAAATACT | + |
|
Preference number: 4 (lower is better) Translates to: NSSCPKPRVLIISCSTESVLQSL*CRTQNT Trigger: AGTATTTTGAGTTCTGCAGCACAATGACTGTAGGAC...TGACTCTGTTGAACATGAAATTATTAGTACTCTAGGTTTTGGACAGCTTGAGTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| CDS-3UTR CCA 90 bp | TTTTGCGTTAGCCACAGAGAGTGGACTTGTTTAGAATGTAAAAGTATTTATCTCCATCTATTGTCTACTTaGATCACTAGAAGGTTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: FCVSHREWTCLECKSIYLHLLST*ITRRLQ Trigger: CTGCAACCTTCTAGTGATCCAAGTAGACAATAGATG...GAGATAAATACTTTTACATTCTAAACAAGTCCACTCTCTGTGGCTAACGCAAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| CDS-3UTR CCA 90 bp | TTTTGCGTTAGCCACAGAGAGTGGACTTGTTTAGAATGTAAAAGTATTTATCTCGATGTGTGTTATGTTTaGAACTGCTGCTTTGAATGC | + |
|
Preference number: 4 (lower is better) Translates to: FCVSHREWTCLECKSIYLDVCYV*NCCFEC Trigger: GCATTCAAAGCAGCAGTTCCAAACATAACACACATC...GAGATAAATACTTTTACATTCTAAACAAGTCCACTCTCTGTGGCTAACGCAAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| CDS-3UTR GCA 90 bp | TTTTGCGTTAGCCACAGAGAGTGGACTTGTTTAGAATGTAAAAGTATTTATCTCAGACTGGTTTGGGTGTaGAATATTAATGCAGGAATA | + |
|
Preference number: 4 (lower is better) Translates to: FCVSHREWTCLECKSIYLRLVWV*NINAGI Trigger: TATTCCTGCATTAATATTGCACACCCAAACCAGTCT...GAGATAAATACTTTTACATTCTAAACAAGTCCACTCTCTGTGGCTAACGCAAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| CDS-3UTR GCA 90 bp | TTTTGCGTTAGCCACAGAGAGTGGACTTGTTTAGAATGTAAAAGTATTTATCTCCTACAGTCATTGTGCTaGAGAACTCAAAATACTCAT | + |
|
Preference number: 4 (lower is better) Translates to: FCVSHREWTCLECKSIYLLQSLC*RTQNTH Trigger: ATGAGTATTTTGAGTTCTGCAGCACAATGACTGTAG...GAGATAAATACTTTTACATTCTAAACAAGTCCACTCTCTGTGGCTAACGCAAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| CDS-3UTR CCA 90 bp | AACTCAAGCTGTCCAAAACCTAGAGTACTAATAATTTCATGTTCAACAGAGTCAAGATTCACCAGGTATTaGTTTGCTTACTTTTTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: NSSCPKPRVLIISCSTESRFTRY*FAYFLS Trigger: ACTCAAAAAGTAAGCAAACCAATACCTGGTGAATCT...TGACTCTGTTGAACATGAAATTATTAGTACTCTAGGTTTTGGACAGCTTGAGTT 34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| CDS TCA 90 bp | GCCGCCGCCGCCGCCGCCGCCGAGTCCGTTAGCTCGCGACGTGCGTaGAAAGGCGGCGGCGGCGTAGTGTTGCCATGGCAGCCGCGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: AAAAAAAESVSSRRA*KGGGGVVLPWQPRP Trigger: CGGCCGCGGCTGCCATGGCAACACTACGCCGCCGCCGCCTTTTCACGCACGTCGCGAGCTAACGGACTCGGCGGCGGCGGCGGCGGCGGC 77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| CDS CCA 90 bp | TGTGCAGGGCGGTGGCCCAGCCGGGGTGGGGCTGAGCGCTGCAACTaGGGCGGGCCCAGCTACAGGGCGGGAAGCCCGAGGCTCACCTCC | + |
|
Preference number: 5 (lower is better) Translates to: CAGRWPSRGGAERCN*GGPSYRAGSPRLTS Trigger: GGAGGTGAGCCTCGGGCTTCCCGCCCTGTAGCTGGGCCCGCCCCAGTTGCAGCGCTCAGCCCCACCCCGGCTGGGCCACCGCCCTGCACA 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000441394.1 |
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| CDS GCA 90 bp | AGGCAGCAACCTGCGAGGGTCAGAGGCGCCGAAGACCCGAGGCCCTaGAGCTTGGGCGGCTGCTCATCCCTGAGACTGTGCAGGGCGGTG | + |
|
Preference number: 5 (lower is better) Translates to: RQQPARVRGAEDPRP*SLGGCSSLRLCRAV Trigger: CACCGCCCTGCACAGTCTCAGGGATGAGCAGCCGCCCAAGCTGCAGGGCCTCGGGTCTTCGGCGCCTCTGACCCTCGCAGGTTGCTGCCT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441394.1 |
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| CDS GCA 90 bp | CCAATGTGTGACATACATACGGTTCTGCACCGAAAGGCAGCAACCTaGGAGGGTCAGAGGCGCCGAAGACCCGAGGCCCTGCAGCTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: PMCDIHTVLHRKAAT*EGQRRRRPEALQLG Trigger: CCCAAGCTGCAGGGCCTCGGGTCTTCGGCGCCTCTGACCCTCGCAGGTTGCTGCCTTTCGGTGCAGAACCGTATGTATGTCACACATTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441394.1 |
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| CDS-3UTR CAA 90 bp | GTGTGCAATATTAATGCAGGAATACGTGGAATACCAGCACAAAGCCGGGGAGGGGGCGGCGGCGTAGTGTaGCCATGGCAGCCGCGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: VCNINAGIRGIPAQSRGGGGGVV*PWQPRP Trigger: CGGCCGCGGCTGCCATGGCAACACTACGCCGCCGCC...CCCTCCCCGGCTTTGTGCTGGTATTCCACGTATTCCTGCATTAATATTGCACAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| CDS GCA 90 bp | ATTCATCTTCTTTCAGAGACGGTTCTGCACCGAAAGGCAGCAACCTaGGAGGGTCAGAGGCGCCGAAGACCCGAGGCCCTGCAGCTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: IHLLSETVLHRKAAT*EGQRRRRPEALQLG Trigger: CCCAAGCTGCAGGGCCTCGGGTCTTCGGCGCCTCTGACCCTCGCAGGTTGCTGCCTTTCGGTGCAGAACCGTCTCTGAAAGAAGATGAAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000414289.5 |
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| CDS-3UTR CAA 90 bp | CTCACAGCCATGTTAACTGGGGGCCACTCCCTGCTGCCGTACCATCATATGAATTCTGGACTTAAGCCATaGATACGCCGTCTCATTGCC | + |
|
Preference number: 5 (lower is better) Translates to: LTAMLTGGHSLLPYHHMNSGLKP*IRRLIA Trigger: GGCAATGAGACGGCGTATCAATGGCTTAAGTCCAGA...ATTCATATGATGGTACGGCAGCAGGGAGTGGCCCCCAGTTAACATGGCTGTGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| CDS TCA 90 bp | TGCTCTATAGTCCTTGTCCCTACTTGTAGAAGGCTTTTCACTCTTTaGTATAGGATGTGCTCGGCCTACAGGTCCCCGGGCTCCTACTCC | + |
|
Preference number: 5 (lower is better) Translates to: CSIVLVPTCRRLFTL*YRMCSAYRSPGSYS Trigger: GGAGTAGGAGCCCGGGGACCTGTAGGCCGAGCACATCCTATATCAAAGAGTGAAAAGCCTTCTACAAGTAGGGACAAGGACTATAGAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000380615.8 ENST00000380617.7 |
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| CDS TCA 90 bp | CTGCCGAACCTGTTGCCATTTGCCTTTGATAGCTGGATCTCTGACTaGCTGGCAATGTCTCTGAATCTGCTGCATCACCCCCTGGTAATA | + |
|
Preference number: 5 (lower is better) Translates to: LPNLLPFAFDSWISD*LAMSLNLLHHPLVI Trigger: TATTACCAGGGGGTGATGCAGCAGATTCAGAGACATTGCCAGTCAGTCAGAGATCCAGCTATCAAAGGCAAATGGCAACAGGTTCGGCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000380615.8 ENST00000380617.7 ENST00000414289.5 ENST00000441394.1 |
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| CDS TCA 90 bp | AGAGACCTGTTAAAACACGGTTTCTCAGGTCTCACATCCAATGTGTaGCATACATACGGTTCTGCACCGAAAGGCAGCAACCTGCGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: RDLLKHGFSGLTSNV*HTYGSAPKGSNLRG Trigger: CCCTCGCAGGTTGCTGCCTTTCGGTGCAGAACCGTATGTATGTCACACATTGGATGTGAGACCTGAGAAACCGTGTTTTAACAGGTCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441394.1 |
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| CDS-3UTR CAA 90 bp | CTTTGTCTTGGTCCACAGAGCTCCTACTCACTGTGTCTTGGACCAACCAATACAATGAGCAGTTCAGACTaGACCCTGCGACTTGCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: LCLGPQSSYSLCLGPTNTMSSSD*TLRLAS Trigger: TGAGGCAAGTCGCAGGGTCAAGTCTGAACTGCTCAT...TGTATTGGTTGGTCCAAGACACAGTGAGTAGGAGCTCTGTGGACCAAGACAAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| CDS-3UTR CAA 90 bp | GCTCCTACTCACTGTGTCTTGGACCAACCAATACACGTCTACAGAATGAAGGGATTCCTGCCGAACCTGTaGCCATTTGCCTTTGATAGC | + |
|
Preference number: 5 (lower is better) Translates to: APTHCVLDQPIHVYRMKGFLPNL*PFAFDS Trigger: GCTATCAAAGGCAAATGGCAACAGGTTCGGCAGGAA...TCCCTTCATTCTGTAGACGTGTATTGGTTGGTCCAAGACACAGTGAGTAGGAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380615.8 |
||
| CDS-3UTR CAA 90 bp | GTGTGCAATATTAATGCAGGAATACGTGGAATACCAGCACAAAGCCGGGGAGGGGGCCTTCTAATCCCTTaGAAAAAGTCAGGCATCCAC | + |
|
Preference number: 5 (lower is better) Translates to: VCNINAGIRGIPAQSRGGGLLIP*KKSGIH Trigger: GTGGATGCCTGACTTTTTCAAAGGGATTAGAAGGCC...CCCTCCCCGGCTTTGTGCTGGTATTCCACGTATTCCTGCATTAATATTGCACAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000380615.8 |
||
| CDS-3UTR CAA 90 bp | CTCACAGCCATGTTAACTGGGGGCCACTCCCTGCTGCCGTACCATCATATGAATCTCTTCCTTTTGCTGTaGGGAGAGGTATATATATCC | + |
|
Preference number: 5 (lower is better) Translates to: LTAMLTGGHSLLPYHHMNLFLLL*GEVYIS Trigger: GGATATATATACCTCTCCCAACAGCAAAAGGAAGAG...ATTCATATGATGGTACGGCAGCAGGGAGTGGCCCCCAGTTAACATGGCTGTGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| CDS-3UTR CAA 90 bp | CTTTGTCTTGGTCCACAGAGCTCCTACTCACTGTGTCTTGGACCAACCAATACACGAACCTGTTGCCATTaGCCTTTGATAGCTGGATCT | + |
|
Preference number: 5 (lower is better) Translates to: LCLGPQSSYSLCLGPTNTRTCCH*PLIAGS Trigger: AGATCCAGCTATCAAAGGCAAATGGCAACAGGTTCG...TGTATTGGTTGGTCCAAGACACAGTGAGTAGGAGCTCTGTGGACCAAGACAAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| CDS-3UTR CAA 90 bp | GCTCCTACTCACTGTGTCTTGGACCAACCAATACACGTCTACAGAATGAAGGGAGATAGGTCCCTCATGTaGACAGAGCACAGAATTGGA | + |
|
Preference number: 5 (lower is better) Translates to: APTHCVLDQPIHVYRMKGDRSLM*TEHRIG Trigger: TCCAATTCTGTGCTCTGTCAACATGAGGGACCTATC...TCCCTTCATTCTGTAGACGTGTATTGGTTGGTCCAAGACACAGTGAGTAGGAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| CDS-3UTR CAA 90 bp | GCTCCTACTCACTGTGTCTTGGACCAACCAATACACGTCTACAGAATGAAGGGATGGATCACTAGAAGGTaGCAGCTTCCATTAAAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: APTHCVLDQPIHVYRMKGWITRR*QLPLKR Trigger: CCTCTTTAATGGAAGCTGCAACCTTCTAGTGATCCA...TCCCTTCATTCTGTAGACGTGTATTGGTTGGTCCAAGACACAGTGAGTAGGAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| CDS-3UTR CAA 90 bp | GCTCCTACTCACTGTGTCTTGGACCAACCAATACACGTCTACAGAATGAAGGGATCTAAATGGTTCATCTaGACAGGACACAGGGAAATC | + |
|
Preference number: 5 (lower is better) Translates to: APTHCVLDQPIHVYRMKGSKWFI*TGHREI Trigger: GATTTCCCTGTGTCCTGTCAAGATGAACCATTTAGA...TCCCTTCATTCTGTAGACGTGTATTGGTTGGTCCAAGACACAGTGAGTAGGAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| CDS-3UTR CAA 90 bp | GTGTGCAATATTAATGCAGGAATACGTGGAATACCAGCACAAAGCCGGGGAGGGGGGAAATCTGGAGGCTaGTCAATTTTAAAACTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: VCNINAGIRGIPAQSRGGGKSGG*SILKLS Trigger: AGAAAGTTTTAAAATTGACAAGCCTCCAGATTTCCC...CCCTCCCCGGCTTTGTGCTGGTATTCCACGTATTCCTGCATTAATATTGCACAC 44% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| CDS-3UTR CAA 90 bp | GGAACCGAAGTCCACTCACACAACATGAAATACTTGCCTAGTCCTTCATTTTATTCGACCTCACGAAGGTaGATCTTCAGAAGCTCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: GTEVHSHNMKYLPSPSFYSTSRR*IFRSSA Trigger: AGCTGAGCTTCTGAAGATCAACCTTCGTGAGGTCGA...ATAAAATGAAGGACTAGGCAAGTATTTCATGTTGTGTGAGTGGACTTCGGTTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| CDS-3UTR CAA 90 bp | ATCTGGCATCTTATAATCTGTGTCTCAGAAAGAAGGGCAATTTACAGCATCAGACTCTCTAGTCCAGCTTaGTCTTGGTCCACAGAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: IWHLIICVSERRAIYSIRLSSPA*SWSTEL Trigger: GAGCTCTGTGGACCAAGACAAAGCTGGACTAGAGAG...TCTGATGCTGTAAATTGCCCTTCTTTCTGAGACACAGATTATAAGATGCCAGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| CDS TCA 90 bp | TATCTTCCAGTTGAATATCAGGATCTAATTCGACCTCACGAAGGTTaGTCTTCAGAAGCTCAGCTCTTCCTTTTGCTGTTGGGAGAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: YLPVEYQDLIRPHEG*SSEAQLFLLLLGEV Trigger: TACCTCTCCCAACAGCAAAAGGAAGAGCTGAGCTTCTGAAGATCAACCTTCGTGAGGTCGAATTAGATCCTGATATTCAACTGGAAGATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000380615.8 ENST00000380617.7 |
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| CDS CCA 90 bp | AAGGGCTTCCACCAGATCCTTATCATAACCAGCACCATCAAATTTTaGCATTTCACCATCACTTGCACCATCTTGCATATTCTTCCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: KGFHQILIITSTIKF*HFTITCTILHILPS Trigger: GGAAGGAAGAATATGCAAGATGGTGCAAGTGATGGTGAAATGCCAAAATTTGATGGTGCTGGTTATGATAAGGATCTGGTGGAAGCCCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000380615.8 ENST00000380617.7 |
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| CDS-3UTR CAA 90 bp | GCTCCTACTCACTGTGTCTTGGACCAACCAATACACGTCTACAGAATGAAGGGACCTGGTAATATACCATaGATGAGTCGTAATTTCCAA | + |
|
Preference number: 5 (lower is better) Translates to: APTHCVLDQPIHVYRMKGPGNIP*MSRNFQ Trigger: TTGGAAATTACGACTCATCAATGGTATATTACCAGG...TCCCTTCATTCTGTAGACGTGTATTGGTTGGTCCAAGACACAGTGAGTAGGAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| CDS-3UTR CAA 90 bp | CTTTGTCTTGGTCCACAGAGCTCCTACTCACTGTGTCTTGGACCAACCAATACACTAACTAATCAACTATaGTTAGGCTGGTGCAAAAGT | + |
|
Preference number: 5 (lower is better) Translates to: LCLGPQSSYSLCLGPTNTLTNQL*LGWCKS Trigger: ACTTTTGCACCAGCCTAACAATAGTTGATTAGTTAG...TGTATTGGTTGGTCCAAGACACAGTGAGTAGGAGCTCTGTGGACCAAGACAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| CDS-3UTR CAA 90 bp | ATCTGGCATCTTATAATCTGTGTCTCAGAAAGAAGGGCAATTTACAGCATCAGAGCTCAGCTCTTCCTTTaGCTGTTGGGAGAGGTATAT | + |
|
Preference number: 5 (lower is better) Translates to: IWHLIICVSERRAIYSIRAQLFL*LLGEVY Trigger: ATATACCTCTCCCAACAGCAAAAGGAAGAGCTGAGC...TCTGATGCTGTAAATTGCCCTTCTTTCTGAGACACAGATTATAAGATGCCAGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| CDS-3UTR CAA 90 bp | CATAGATTCACCAGGTATTGGTTTGCTTACTTTTTGAGTAATTCGTGCTTTCAGCCTACTCACTGTGTCTaGGACCAACCAATACACGTC | + |
|
Preference number: 5 (lower is better) Translates to: HRFTRYWFAYFLSNSCFQPTHCV*DQPIHV Trigger: GACGTGTATTGGTTGGTCCAAGACACAGTGAGTAGG...CTGAAAGCACGAATTACTCAAAAAGTAAGCAAACCAATACCTGGTGAATCTATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| CDS-3UTR CAA 90 bp | TTTTGCGTTAGCCACAGAGAGTGGACTTGTTTAGAATGTAAAAGTATTTATCTCTGTCATCTCTCCCTCTaGCTCTATAGTCCTTGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: FCVSHREWTCLECKSIYLCHLSL*LYSPCP Trigger: GGGACAAGGACTATAGAGCAAGAGGGAGAGATGACA...GAGATAAATACTTTTACATTCTAAACAAGTCCACTCTCTGTGGCTAACGCAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| CDS-3UTR CAA 90 bp | AGCAAACTCTCGCCATCAATTATTTCTCAACTACATTTAGTATTCTTCGCAGTTAGTCAGGCATCCACATaGGAAGAACAACAGCTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: SKLSPSIISQLHLVFFAVSQAST*EEQQLP Trigger: GGGAAGCTGTTGTTCTTCCAATGTGGATGCCTGACT...AACTGCGAAGAATACTAAATGTAGTTGAGAAATAATTGATGGCGAGAGTTTGCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| CDS-3UTR CAA 90 bp | GGAACCGAAGTCCACTCACACAACATGAAATACTTGCCTAGTCCTTCATTTTATTTAGTCCTACAGTCATaGTGCTGCAGAACTCAAAAT | + |
|
Preference number: 5 (lower is better) Translates to: GTEVHSHNMKYLPSPSFYLVLQS*CCRTQN Trigger: ATTTTGAGTTCTGCAGCACAATGACTGTAGGACTAA...ATAAAATGAAGGACTAGGCAAGTATTTCATGTTGTGTGAGTGGACTTCGGTTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| CDS-3UTR CAA 90 bp | GGAACCGAAGTCCACTCACACAACATGAAATACTTGCCTAGTCCTTCATTTTATTCACAGAGGCCTTATTaGGAATACAAACACTTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: GTEVHSHNMKYLPSPSFYSQRPY*EYKHFA Trigger: AGCAAAGTGTTTGTATTCCAAATAAGGCCTCTGTGA...ATAAAATGAAGGACTAGGCAAGTATTTCATGTTGTGTGAGTGGACTTCGGTTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| CDS TCA 90 bp | TATCTTCCAGTTGAATATCAGGATCTAATTCGACCTCACGAAGGTTaGTCTTCAGAAGCTCAGCTCTTCCTTTTGCTGTTACAAGATTTT | + |
|
Preference number: 5 (lower is better) Translates to: YLPVEYQDLIRPHEG*SSEAQLFLLLLQDF Trigger: AAAATCTTGTAACAGCAAAAGGAAGAGCTGAGCTTCTGAAGATCAACCTTCGTGAGGTCGAATTAGATCCTGATATTCAACTGGAAGATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000480854.1 |
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| CDS-3UTR CAA 90 bp | AACTCAAGCTGTCCAAAACCTAGAGTACTAATAATTTCATGTTCAACAGAGTCATGTTGCCATTTGCCTTaGATAGCTGGATCTCTGACT | + |
|
Preference number: 5 (lower is better) Translates to: NSSCPKPRVLIISCSTESCCHLP*IAGSLT Trigger: AGTCAGAGATCCAGCTATCAAAGGCAAATGGCAACA...TGACTCTGTTGAACATGAAATTATTAGTACTCTAGGTTTTGGACAGCTTGAGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| CDS-3UTR CAA 90 bp | CATAGATTCACCAGGTATTGGTTTGCTTACTTTTTGAGTAATTCGTGCTTTCAGATCACTTGCACCATCTaGCATATTCTTCCTTCCCTT | + |
|
Preference number: 5 (lower is better) Translates to: HRFTRYWFAYFLSNSCFQITCTI*HILPSL Trigger: AAGGGAAGGAAGAATATGCAAGATGGTGCAAGTGAT...CTGAAAGCACGAATTACTCAAAAAGTAAGCAAACCAATACCTGGTGAATCTATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| CDS-3UTR CAA 90 bp | GGAACCGAAGTCCACTCACACAACATGAAATACTTGCCTAGTCCTTCATTTTATCTTTCAGCCTATGTTTaGAGAGTGAAATATGACATC | + |
|
Preference number: 5 (lower is better) Translates to: GTEVHSHNMKYLPSPSFYLSAYV*RVKYDI Trigger: GATGTCATATTTCACTCTCAAAACATAGGCTGAAAG...ATAAAATGAAGGACTAGGCAAGTATTTCATGTTGTGTGAGTGGACTTCGGTTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| CDS-3UTR CAA 90 bp | AACTCAAGCTGTCCAAAACCTAGAGTACTAATAATTTCATGTTCAACAGAGTCAGCATTTCACCATCACTaGCACCATCTTGCATATTCT | + |
|
Preference number: 5 (lower is better) Translates to: NSSCPKPRVLIISCSTESAFHHH*HHLAYS Trigger: AGAATATGCAAGATGGTGCAAGTGATGGTGAAATGC...TGACTCTGTTGAACATGAAATTATTAGTACTCTAGGTTTTGGACAGCTTGAGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| CDS-3UTR CAA 90 bp | ATCTGGCATCTTATAATCTGTGTCTCAGAAAGAAGGGCAATTTACAGCATCAGATTTGGAACTGCTGCTTaGAATGCAATACATCCAAAT | + |
|
Preference number: 5 (lower is better) Translates to: IWHLIICVSERRAIYSIRFGTAA*NAIHPN Trigger: ATTTGGATGTATTGCATTCAAAGCAGCAGTTCCAAA...TCTGATGCTGTAAATTGCCCTTCTTTCTGAGACACAGATTATAAGATGCCAGAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| CDS-3UTR CAA 90 bp | TTTTGCGTTAGCCACAGAGAGTGGACTTGTTTAGAATGTAAAAGTATTTATCTCGTAGAAGACGAAACGTaGAAGAATGTTGTACCACAT | + |
|
Preference number: 5 (lower is better) Translates to: FCVSHREWTCLECKSIYLVEDET*KNVVPH Trigger: ATGTGGTACAACATTCTTCAACGTTTCGTCTTCTAC...GAGATAAATACTTTTACATTCTAAACAAGTCCACTCTCTGTGGCTAACGCAAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| CDS-3UTR CAA 90 bp | AACTCAAGCTGTCCAAAACCTAGAGTACTAATAATTTCATGTTCAACAGAGTCAGTAATTCCTGCTGAATaGAGTGAGCATGTCAGATTT | + |
|
Preference number: 5 (lower is better) Translates to: NSSCPKPRVLIISCSTESVIPAE*SEHVRF Trigger: AAATCTGACATGCTCACTCAATTCAGCAGGAATTAC...TGACTCTGTTGAACATGAAATTATTAGTACTCTAGGTTTTGGACAGCTTGAGTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| CDS-3UTR CAA 90 bp | AGCAAACTCTCGCCATCAATTATTTCTCAACTACATTTAGTATTCTTCGCAGTTTGGTTTGCTTACTTTTaGAGTAATTCGTGCTTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: SKLSPSIISQLHLVFFAVWFAYF*SNSCFQ Trigger: CTGAAAGCACGAATTACTCAAAAAGTAAGCAAACCA...AACTGCGAAGAATACTAAATGTAGTTGAGAAATAATTGATGGCGAGAGTTTGCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| CDS TCA 72 bp | GCCGCCGCCGCCGAGTCCGTTAGCTCGCGACGTGCGTaGAAAGGCGGCGGCGGCGTAGTGTTGCCATGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: AAAAESVSSRRA*KGGGGVVLPWQ Trigger: CTGCCATGGCAACACTACGCCGCCGCCGCCTTTTCACGCACGTCGCGAGCTAACGGACTCGGCGGCGGCGGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380615.8 |
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| CDS GCA 72 bp | CCTGCGAGGGTCAGAGGCGCCGAAGACCCGAGGCCCTaGAGCTTGGGCGGCTGCTCATCCCTGAGACTGTGC | + |
|
Preference number: 6 (lower is better) Translates to: PARVRGAEDPRP*SLGGCSSLRLC Trigger: GCACAGTCTCAGGGATGAGCAGCCGCCCAAGCTGCAGGGCCTCGGGTCTTCGGCGCCTCTGACCCTCGCAGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441394.1 |
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| CDS GCA 72 bp | CTTTCAGAGACGGTTCTGCACCGAAAGGCAGCAACCTaGGAGGGTCAGAGGCGCCGAAGACCCGAGGCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: LSETVLHRKAAT*EGQRRRRPEAL Trigger: CAGGGCCTCGGGTCTTCGGCGCCTCTGACCCTCGCAGGTTGCTGCCTTTCGGTGCAGAACCGTCTCTGAAAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000414289.5 |
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| CDS GCA 72 bp | GACATACATACGGTTCTGCACCGAAAGGCAGCAACCTaGGAGGGTCAGAGGCGCCGAAGACCCGAGGCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: DIHTVLHRKAAT*EGQRRRRPEAL Trigger: CAGGGCCTCGGGTCTTCGGCGCCTCTGACCCTCGCAGGTTGCTGCCTTTCGGTGCAGAACCGTATGTATGTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441394.1 |
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| CDS TCA 72 bp | CTCAGAGGTCTTACTTCTCGATTGGGACGCCTGATCTaGGGTGGAGCTCTGTGTTCTGCAGGAACAGGGGGT | + |
|
Preference number: 6 (lower is better) Translates to: LRGLTSRLGRLI*GGALCSAGTGG Trigger: ACCCCCTGTTCCTGCAGAACACAGAGCTCCACCTCAGATCAGGCGTCCCAATCGAGAAGTAAGACCTCTGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000380615.8 ENST00000380617.7 ENST00000414289.5 ENST00000441394.1 |
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| CDS GCA 72 bp | ATGTGCTCGGCCTACAGGTCCCCGGGCTCCTACTCCTaGCATTTCTTTCCTCAGAGGTCTTACTTCTCGATT | + |
|
Preference number: 6 (lower is better) Translates to: MCSAYRSPGSYS*HFFPQRSYFSI Trigger: AATCGAGAAGTAAGACCTCTGAGGAAAGAAATGGCAGGAGTAGGAGCCCGGGGACCTGTAGGCCGAGCACAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000380615.8 ENST00000380617.7 ENST00000414289.5 ENST00000441394.1 |
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| CDS GCA 72 bp | AGGTCTCACATCCAATGTGTGACATACATACGGTTCTaGACCGAAAGGCAGCAACCTGCGAGGGTCAGAGGC | + |
|
Preference number: 6 (lower is better) Translates to: RSHIQCVTYIRF*TERQQPARVRG Trigger: GCCTCTGACCCTCGCAGGTTGCTGCCTTTCGGTGCAGAACCGTATGTATGTCACACATTGGATGTGAGACCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441394.1 |
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| CDS TCA 72 bp | CTTTCCTCAGAGGTCTTACTTCTCGATTGGGACGCCTaGTCTGAGGTGGAGCTCTGTGTTCTGCAGGAACAG | + |
|
Preference number: 6 (lower is better) Translates to: LSSEVLLLDWDA*SEVELCVLQEQ Trigger: CTGTTCCTGCAGAACACAGAGCTCCACCTCAGATCAGGCGTCCCAATCGAGAAGTAAGACCTCTGAGGAAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000380615.8 ENST00000380617.7 ENST00000414289.5 ENST00000441394.1 |
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| CDS TCA 72 bp | GTCCTTGTCCCTACTTGTAGAAGGCTTTTCACTCTTTaGTATAGGATGTGCTCGGCCTACAGGTCCCCGGGC | + |
|
Preference number: 6 (lower is better) Translates to: VLVPTCRRLFTL*YRMCSAYRSPG Trigger: GCCCGGGGACCTGTAGGCCGAGCACATCCTATATCAAAGAGTGAAAAGCCTTCTACAAGTAGGGACAAGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000380615.8 ENST00000380617.7 |
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| CDS CCA 72 bp | CTGAGGTGGAGCTCTGTGTTCTGCAGGAACAGGGGGTaGCCAAACAGCAGGATCTCTAAATGGTTCATCTTG | + |
|
Preference number: 6 (lower is better) Translates to: LRWSSVFCRNRG*PNSRISKWFIL Trigger: CAAGATGAACCATTTAGAGATCCTGCTGTTTGGCCACCCCCTGTTCCTGCAGAACACAGAGCTCCACCTCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000380615.8 ENST00000380617.7 ENST00000414289.5 ENST00000441394.1 |
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| CDS GCA 72 bp | CATCTGAATGAGCAGTTCAGACTTGACCCTGCGACTTaGCTCATGTTCATCAGAGGTTCCTCTTCGACTGCA | + |
|
Preference number: 6 (lower is better) Translates to: HLNEQFRLDPAT*LMFIRGSSSTA Trigger: TGCAGTCGAAGAGGAACCTCTGATGAACATGAGGCAAGTCGCAGGGTCAAGTCTGAACTGCTCATTCAGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000380615.8 ENST00000380617.7 |
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| CDS CAA 72 bp | GGGTGGCCAAACAGCAGGATCTCTAAATGGTTCATCTaGACAGGACACAGGGAAATCTGGAGGCTTGTCAAT | + |
|
Preference number: 6 (lower is better) Translates to: GWPNSRISKWFI*TGHREIWRLVN Trigger: ATTGACAAGCCTCCAGATTTCCCTGTGTCCTGTCAAGATGAACCATTTAGAGATCCTGCTGTTTGGCCACCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000380615.8 ENST00000380617.7 ENST00000414289.5 ENST00000441394.1 |
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| CDS CAA 72 bp | TCCAATAATTCCTGCCGAACCTGTTGCCATTTGCCTTaGATAGCTGGATCTCTGACTGACTGGCAATGTCTC | + |
|
Preference number: 6 (lower is better) Translates to: SNNSCRTCCHLP*IAGSLTDWQCL Trigger: GAGACATTGCCAGTCAGTCAGAGATCCAGCTATCAAAGGCAAATGGCAACAGGTTCGGCAGGAATTATTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000380615.8 ENST00000380617.7 ENST00000414289.5 ENST00000441394.1 |
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| CDS TCA 72 bp | TTAAAACACGGTTTCTCAGGTCTCACATCCAATGTGTaGCATACATACGGTTCTGCACCGAAAGGCAGCAAC | + |
|
Preference number: 6 (lower is better) Translates to: LKHGFSGLTSNV*HTYGSAPKGSN Trigger: GTTGCTGCCTTTCGGTGCAGAACCGTATGTATGTCACACATTGGATGTGAGACCTGAGAAACCGTGTTTTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441394.1 |
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| CDS CAA 90 bp | GGCAATGTCTCTGAATCTGCTGCATCACCCCCTGGTAATATACCATaGATGAGTCGTAATTTCCAAGAAGGGCATATTCTCTTCCTTTCT | + |
|
Preference number: 6 (lower is better) Translates to: GNVSESAASPPGNIP*MSRNFQEGHILFLS Trigger: AGAAAGGAAGAGAATATGCCCTTCTTGGAAATTACGACTCATCAATGGTATATTACCAGGGGGTGATGCAGCAGATTCAGAGACATTGCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000380615.8 ENST00000380617.7 ENST00000414289.5 ENST00000441394.1 |
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| CDS TCA 72 bp | GTTGAATATCAGGATCTAATTCGACCTCACGAAGGTTaGTCTTCAGAAGCTCAGCTCTTCCTTTTGCTGTTG | + |
|
Preference number: 6 (lower is better) Translates to: VEYQDLIRPHEG*SSEAQLFLLLL Trigger: CAACAGCAAAAGGAAGAGCTGAGCTTCTGAAGATCAACCTTCGTGAGGTCGAATTAGATCCTGATATTCAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000380615.8 ENST00000380617.7 |
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| CDS CAA 72 bp | TCTGAATCTGCTGCATCACCCCCTGGTAATATACCATaGATGAGTCGTAATTTCCAAGAAGGGCATATTCTC | + |
|
Preference number: 6 (lower is better) Translates to: SESAASPPGNIP*MSRNFQEGHIL Trigger: GAGAATATGCCCTTCTTGGAAATTACGACTCATCAATGGTATATTACCAGGGGGTGATGCAGCAGATTCAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000380615.8 ENST00000380617.7 ENST00000414289.5 ENST00000441394.1 |
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| CDS TCA 72 bp | GTTGAATATCAGGATCTAATTCGACCTCACGAAGGTTaGTCTTCAGAAGCTCAGCTCTTCCTTTTGCTGTTA | + |
|
Preference number: 6 (lower is better) Translates to: VEYQDLIRPHEG*SSEAQLFLLLL Trigger: TAACAGCAAAAGGAAGAGCTGAGCTTCTGAAGATCAACCTTCGTGAGGTCGAATTAGATCCTGATATTCAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000480854.1 |
||
| CDS CCA 72 bp | TCCATTAGTATTATTACCAATTCACTGCATGACTCATaGAATCATTTAAATTCCTATGTGCCTCTGTTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: SISIITNSLHDS*NHLNSYVPLLQ Trigger: CTGCAACAGAGGCACATAGGAATTTAAATGATTCCATGAGTCATGCAGTGAATTGGTAATAATACTAATGGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000480854.1 |
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