RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KAT5 (Homo sapiens)

Ensembl gene IDs: ENSG00000172977

Ensembl transcript IDs: ENST00000341318.9, ENST00000352980.8, ENST00000377046.7, ENST00000525204.1, ENST00000525600.1, ENST00000527544.5, ENST00000528198.5, ENST00000530446.5, ENST00000530605.5, ENST00000531880.1, ENST00000532042.5, ENST00000533441.1, ENST00000533596.1, ENST00000534104.5, ENST00000534293.5, ENST00000534650.5, ENST00000534681.1

Found 416 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TCAGAGGAGGCCTGGGCCTGTGGCCAGCTGACCTTGGAGTTGGTCTaGGCCCGGAGCTCGCCTTGGTGCTGGGCACCAGTGGGCCCCTGC +
Preference number: 1 (lower is better)
Translates to: SEEAWACGQLTLELV*ARSSPWCWAPVGPC
Trigger: GCAGGGGCCCACTGGTGCCCAGCACCAAGGCGAGCTCCGGGCTCAGACCAACTCCAAGGTCAGCTGGCCACAGGCCCAGGCCTCCTCTGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000533596.1
ENST00000534650.5
3UTR-3UTR GCA 90 bp TCTGAGCCCGGAGCTCGCCTTGGTGCTGGGCACCAGTGGGCCCCTGCCAGGCCTCAGCCCCAGTCCTGCTaGCGTCTTGGCACTGCAGTG +
Preference number: 2 (lower is better)
Translates to: SEPGARLGAGHQWAPARPQPQSC*RLGTAV
Trigger: CACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTG...AGGCCTGGCAGGGGCCCACTGGTGCCCAGCACCAAGGCGAGCTCCGGGCTCAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000533596.1
ENST00000534650.5
3UTR-3UTR CCA 90 bp TCTGAGCCCGGAGCTCGCCTTGGTGCTGGGCACCAGTGGGCCCCTGCCAGGCCTTTGTGGGAGCTGCAGTaGGGGCGGGGTGGGCTATCA +
Preference number: 2 (lower is better)
Translates to: SEPGARLGAGHQWAPARPLWELQ*GRGGLS
Trigger: TGATAGCCCACCCCGCCCCCACTGCAGCTCCCACAA...AGGCCTGGCAGGGGCCCACTGGTGCCCAGCACCAAGGCGAGCTCCGGGCTCAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000533596.1
ENST00000534650.5
3UTR-3UTR CCA 90 bp CCAGCCCTCTGTACAGAGCTCCCCCATCCGGATCCCTTCTCACTGTACACAGCTGCCCGGAGCTCGCCTTaGTGCTGGGCACCAGTGGGC +
Preference number: 2 (lower is better)
Translates to: PALCTELPHPDPFSLYTAARSSP*CWAPVG
Trigger: GCCCACTGGTGCCCAGCACCAAGGCGAGCTCCGGGC...AGCTGTGTACAGTGAGAAGGGATCCGGATGGGGGAGCTCTGTACAGAGGGCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000533596.1
ENST00000534650.5
3UTR-3UTR TCA 90 bp CCAGCCCTCTGTACAGAGCTCCCCCATCCGGATCCCTTCTCACTGTACACAGCTACCTTGGAGTTGGTCTaGGCCCGGAGCTCGCCTTGG +
Preference number: 2 (lower is better)
Translates to: PALCTELPHPDPFSLYTATLELV*ARSSPW
Trigger: CCAAGGCGAGCTCCGGGCTCAGACCAACTCCAAGGT...AGCTGTGTACAGTGAGAAGGGATCCGGATGGGGGAGCTCTGTACAGAGGGCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000533596.1
ENST00000534650.5
3UTR-3UTR GCA 90 bp CCAGCCCTCTGTACAGAGCTCCCCCATCCGGATCCCTTCTCACTGTACACAGCTCAGCCCCAGTCCTGCTaGCGTCTTGGCACTGCAGTG +
Preference number: 2 (lower is better)
Translates to: PALCTELPHPDPFSLYTAQPQSC*RLGTAV
Trigger: CACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTG...AGCTGTGTACAGTGAGAAGGGATCCGGATGGGGGAGCTCTGTACAGAGGGCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000533596.1
ENST00000534650.5
3UTR-3UTR CCA 90 bp CCAGCCCTCTGTACAGAGCTCCCCCATCCGGATCCCTTCTCACTGTACACAGCTGTCCTGCTGCCGTCTTaGCACTGCAGTGGGCAGTGT +
Preference number: 2 (lower is better)
Translates to: PALCTELPHPDPFSLYTAVLLPS*HCSGQC
Trigger: ACACTGCCCACTGCAGTGCCAAGACGGCAGCAGGAC...AGCTGTGTACAGTGAGAAGGGATCCGGATGGGGGAGCTCTGTACAGAGGGCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000533596.1
ENST00000534650.5
3UTR-3UTR GCA 90 bp CCAGCCCTCTGTACAGAGCTCCCCCATCCGGATCCCTTCTCACTGTACACAGCTTATCAGCCCCAGTCCTaGTGCCGTCTTGGCACTGCA +
Preference number: 2 (lower is better)
Translates to: PALCTELPHPDPFSLYTAYQPQS*CRLGTA
Trigger: TGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATA...AGCTGTGTACAGTGAGAAGGGATCCGGATGGGGGAGCTCTGTACAGAGGGCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000533596.1
ENST00000534650.5
3UTR-3UTR CAA 90 bp TCTGAGCCCGGAGCTCGCCTTGGTGCTGGGCACCAGTGGGCCCCTGCCAGGCCTAGTCCTGCTGCCGTCTaGGCACTGCAGTGGGCAGTG +
Preference number: 3 (lower is better)
Translates to: SEPGARLGAGHQWAPARPSPAAV*ALQWAV
Trigger: CACTGCCCACTGCAGTGCCAAGACGGCAGCAGGACT...AGGCCTGGCAGGGGCCCACTGGTGCCCAGCACCAAGGCGAGCTCCGGGCTCAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000533596.1
ENST00000534650.5
3UTR TCA 72 bp GCCTGGGCCTGTGGCCAGCTGACCTTGGAGTTGGTCTaGGCCCGGAGCTCGCCTTGGTGCTGGGCACCAGTG +
Preference number: 3 (lower is better)
Translates to: AWACGQLTLELV*ARSSPWCWAPV
Trigger: CACTGGTGCCCAGCACCAAGGCGAGCTCCGGGCTCAGACCAACTCCAAGGTCAGCTGGCCACAGGCCCAGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000533596.1
ENST00000534650.5
3UTR GCA 72 bp GCTCCCCCATCCGGATCCCTTCTCACTGTACACAGCTaGCTGGCTCCCTCTGGTCCCTGCTTCAGAGGAGGC +
Preference number: 3 (lower is better)
Translates to: APPSGSLLTVHS*LAPSGPCFRGG
Trigger: GCCTCCTCTGAAGCAGGGACCAGAGGGAGCCAGGCAGCTGTGTACAGTGAGAAGGGATCCGGATGGGGGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000533596.1
ENST00000534650.5
3UTR-3UTR CAA 90 bp CCAGCCCTCTGTACAGAGCTCCCCCATCCGGATCCCTTCTCACTGTACACAGCTAGTCCTGCTGCCGTCTaGGCACTGCAGTGGGCAGTG +
Preference number: 3 (lower is better)
Translates to: PALCTELPHPDPFSLYTASPAAV*ALQWAV
Trigger: CACTGCCCACTGCAGTGCCAAGACGGCAGCAGGACT...AGCTGTGTACAGTGAGAAGGGATCCGGATGGGGGAGCTCTGTACAGAGGGCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000533596.1
ENST00000534650.5
CDS-3UTR GCA 90 bp TCTGAGCCCGGAGCTCGCCTTGGTGCTGGGCACCAGTGGGCCCCTGCCAGGCCTCCGTCCTGGCTGGGCTaGCACTGCCCTACGGGCGGC +
Preference number: 4 (lower is better)
Translates to: SEPGARLGAGHQWAPARPPSWLG*HCPTGG
Trigger: GCCGCCCGTAGGGCAGTGGCAGCCCAGCCAGGACGG...AGGCCTGGCAGGGGCCCACTGGTGCCCAGCACCAAGGCGAGCTCCGGGCTCAGA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000534650.5
CDS-3UTR CCA 90 bp TCTGAGCCCGGAGCTCGCCTTGGTGCTGGGCACCAGTGGGCCCCTGCCAGGCCTGGACCGAGCGCCCTGTaGGCCCGGGCCTCACGAAGC +
Preference number: 4 (lower is better)
Translates to: SEPGARLGAGHQWAPARPGPSAL*ARASRS
Trigger: GCTTCGTGAGGCCCGGGCCCACAGGGCGCTCGGTCC...AGGCCTGGCAGGGGCCCACTGGTGCCCAGCACCAAGGCGAGCTCCGGGCTCAGA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352980.8
ENST00000377046.7
CDS-3UTR GCA 90 bp TCTGAGCCCGGAGCTCGCCTTGGTGCTGGGCACCAGTGGGCCCCTGCCAGGCCTCGGAGCTCGCCTTGGTaGTGGGCACCAGTGGGCCCC +
Preference number: 4 (lower is better)
Translates to: SEPGARLGAGHQWAPARPRSSPW*WAPVGP
Trigger: GGGGCCCACTGGTGCCCAGCACCAAGGCGAGCTCCG...AGGCCTGGCAGGGGCCCACTGGTGCCCAGCACCAAGGCGAGCTCCGGGCTCAGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000533596.1
ENST00000534650.5
CDS-3UTR CCA 90 bp TCTGAGCCCGGAGCTCGCCTTGGTGCTGGGCACCAGTGGGCCCCTGCCAGGCCTGCCCGGAGCTCGCCTTaGTGCTGGGCACCAGTGGGC +
Preference number: 4 (lower is better)
Translates to: SEPGARLGAGHQWAPARPARSSP*CWAPVG
Trigger: GCCCACTGGTGCCCAGCACCAAGGCGAGCTCCGGGC...AGGCCTGGCAGGGGCCCACTGGTGCCCAGCACCAAGGCGAGCTCCGGGCTCAGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000533596.1
ENST00000534650.5
CDS-3UTR GCA 90 bp GCGGGGTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCACCGTCCTGGCTGGGCTaGCACTGCCCTACGGGCGGC +
Preference number: 4 (lower is better)
Translates to: AGWAISPSPAAVLALQWAPSWLG*HCPTGG
Trigger: GCCGCCCGTAGGGCAGTGGCAGCCCAGCCAGGACGG...TGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCACCCCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000534650.5
CDS-3UTR GCA 90 bp CGGGGTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGCCGTCCTGGCTGGGCTaGCACTGCCCTACGGGCGGC +
Preference number: 4 (lower is better)
Translates to: RGGLSAPVLLPSWHCSGQPSWLG*HCPTGG
Trigger: GCCGCCCGTAGGGCAGTGGCAGCCCAGCCAGGACGG...CTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCACCCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000534650.5
CDS-3UTR GCA 90 bp TCTGAGCCCGGAGCTCGCCTTGGTGCTGGGCACCAGTGGGCCCCTGCCAGGCCTGTGCTTTGTGGGAGCTaGAGTGGGGGCGGGGTGGGC +
Preference number: 4 (lower is better)
Translates to: SEPGARLGAGHQWAPARPVLCGS*SGGGVG
Trigger: GCCCACCCCGCCCCCACTGCAGCTCCCACAAAGCAC...AGGCCTGGCAGGGGCCCACTGGTGCCCAGCACCAAGGCGAGCTCCGGGCTCAGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000533596.1
ENST00000534650.5
CDS-3UTR CCA 90 bp TCTGAGCCCGGAGCTCGCCTTGGTGCTGGGCACCAGTGGGCCCCTGCCAGGCCTGCTCGCCACCGGGAATaGCCTCCCGCTCCTTGGGCA +
Preference number: 4 (lower is better)
Translates to: SEPGARLGAGHQWAPARPARHRE*PPAPWA
Trigger: TGCCCAAGGAGCGGGAGGCCATTCCCGGTGGCGAGC...AGGCCTGGCAGGGGCCCACTGGTGCCCAGCACCAAGGCGAGCTCCGGGCTCAGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341318.9
ENST00000377046.7
CDS-3UTR CCA 90 bp CGGGGTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGGGACCGAGCGCCCTGTaGGCCCGGGCCTCACGAAGC +
Preference number: 4 (lower is better)
Translates to: RGGLSAPVLLPSWHCSGQGPSAL*ARASRS
Trigger: GCTTCGTGAGGCCCGGGCCCACAGGGCGCTCGGTCC...CTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCACCCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352980.8
ENST00000377046.7
CDS-3UTR TCA 90 bp TCTGAGCCCGGAGCTCGCCTTGGTGCTGGGCACCAGTGGGCCCCTGCCAGGCCTAGAAGTACCACGGCTTaGGGCGGTGCCGGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: SEPGARLGAGHQWAPARPRSTTA*GGAGPA
Trigger: AGCTGGGCCGGCACCGCCTCAAGCCGTGGTACTTCT...AGGCCTGGCAGGGGCCCACTGGTGCCCAGCACCAAGGCGAGCTCCGGGCTCAGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000534650.5
CDS-3UTR GCA 90 bp CGGGGTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGGTCTTCCCGCTGGCCTaGGCCGAGGCCGGCACCTCT +
Preference number: 4 (lower is better)
Translates to: RGGLSAPVLLPSWHCSGQVFPLA*AEAGTS
Trigger: AGAGGTGCCGGCCTCGGCGCAGGCCAGCGGGAAGAC...CTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCACCCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341318.9
ENST00000377046.7
CDS-3UTR GCA 90 bp TCTGAGCCCGGAGCTCGCCTTGGTGCTGGGCACCAGTGGGCCCCTGCCAGGCCTCACGGCTTGAGGCGGTaGCGGCCCAGCTCAATGCAC +
Preference number: 4 (lower is better)
Translates to: SEPGARLGAGHQWAPARPHGLRR*RPSSMH
Trigger: GTGCATTGAGCTGGGCCGGCACCGCCTCAAGCCGTG...AGGCCTGGCAGGGGCCCACTGGTGCCCAGCACCAAGGCGAGCTCCGGGCTCAGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000534650.5
CDS-3UTR GCA 90 bp CGGGGTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGCGGAGCTCGCCTTGGTaGTGGGCACCAGTGGGCCCC +
Preference number: 4 (lower is better)
Translates to: RGGLSAPVLLPSWHCSGQRSSPW*WAPVGP
Trigger: GGGGCCCACTGGTGCCCAGCACCAAGGCGAGCTCCG...CTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCACCCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000533596.1
ENST00000534650.5
CDS-3UTR GCA 90 bp GCGGGGTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCACGGAGCTCGCCTTGGTaGTGGGCACCAGTGGGCCCC +
Preference number: 4 (lower is better)
Translates to: AGWAISPSPAAVLALQWARSSPW*WAPVGP
Trigger: GGGGCCCACTGGTGCCCAGCACCAAGGCGAGCTCCG...TGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCACCCCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000533596.1
ENST00000534650.5
CDS-3UTR GCA 90 bp TCTGAGCCCGGAGCTCGCCTTGGTGCTGGGCACCAGTGGGCCCCTGCCAGGCCTGCTCCCTCTGGTCCCTaGTTCAGAGGAGGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: SEPGARLGAGHQWAPARPAPSGP*FRGGLG
Trigger: GCCCAGGCCTCCTCTGAAGCAGGGACCAGAGGGAGC...AGGCCTGGCAGGGGCCCACTGGTGCCCAGCACCAAGGCGAGCTCCGGGCTCAGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000533596.1
ENST00000534650.5
CDS-3UTR CCA 90 bp CGGGGTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGGCCAGGGTCGGCTACTaGGGGGCCTCGGGCTCTACC +
Preference number: 4 (lower is better)
Translates to: RGGLSAPVLLPSWHCSGQARVGY*GASGST
Trigger: GGTAGAGCCCGAGGCCCCCCAGTAGCCGACCCTGGC...CTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCACCCCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341318.9
ENST00000530446.5
CDS-3UTR CCA 90 bp GCGGGGTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGCAAGGTCTTCCCGCTaGCCTGCGCCGAGGCCGGCA +
Preference number: 4 (lower is better)
Translates to: AGWAISPSPAAVLALQWAARSSR*PAPRPA
Trigger: TGCCGGCCTCGGCGCAGGCCAGCGGGAAGACCTTGC...TGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCACCCCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341318.9
ENST00000377046.7
CDS-3UTR CCA 90 bp TCTGAGCCCGGAGCTCGCCTTGGTGCTGGGCACCAGTGGGCCCCTGCCAGGCCTCCGGGGCTGTCTCGCTaGGCACTGGAGTTGCTGGTG +
Preference number: 4 (lower is better)
Translates to: SEPGARLGAGHQWAPARPPGLSR*ALELLV
Trigger: CACCAGCAACTCCAGTGCCCAGCGAGACAGCCCCGG...AGGCCTGGCAGGGGCCCACTGGTGCCCAGCACCAAGGCGAGCTCCGGGCTCAGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000534650.5
CDS-3UTR TCA 90 bp GCGGGGTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCATCCGCAGGAGCCGCTTaGGCATGGCCCGCTCATGGC +
Preference number: 4 (lower is better)
Translates to: AGWAISPSPAAVLALQWASAGAA*AWPAHG
Trigger: GCCATGAGCGGGCCATGCTCAAGCGGCTCCTGCGGA...TGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCACCCCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000533596.1
ENST00000534650.5
CDS-3UTR TCA 90 bp TCTGAGCCCGGAGCTCGCCTTGGTGCTGGGCACCAGTGGGCCCCTGCCAGGCCTACCTTGGAGTTGGTCTaGGCCCGGAGCTCGCCTTGG +
Preference number: 4 (lower is better)
Translates to: SEPGARLGAGHQWAPARPTLELV*ARSSPW
Trigger: CCAAGGCGAGCTCCGGGCTCAGACCAACTCCAAGGT...AGGCCTGGCAGGGGCCCACTGGTGCCCAGCACCAAGGCGAGCTCCGGGCTCAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000533596.1
ENST00000534650.5
CDS-3UTR TCA 90 bp TCTGAGCCCGGAGCTCGCCTTGGTGCTGGGCACCAGTGGGCCCCTGCCAGGCCTGGGCCTGTGGCCAGCTaGCCTTGGAGTTGGTCTGAG +
Preference number: 4 (lower is better)
Translates to: SEPGARLGAGHQWAPARPGPVAS*PWSWSE
Trigger: CTCAGACCAACTCCAAGGTCAGCTGGCCACAGGCCC...AGGCCTGGCAGGGGCCCACTGGTGCCCAGCACCAAGGCGAGCTCCGGGCTCAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000533596.1
ENST00000534650.5
CDS-3UTR TCA 90 bp TCTGAGCCCGGAGCTCGCCTTGGTGCTGGGCACCAGTGGGCCCCTGCCAGGCCTGTAGAGGGGGACCTTTaGGAGACACCGCGACCCAGC +
Preference number: 4 (lower is better)
Translates to: SEPGARLGAGHQWAPARPVEGDL*ETPRPS
Trigger: GCTGGGTCGCGGTGTCTCTCAAAGGTCCCCCTCTAC...AGGCCTGGCAGGGGCCCACTGGTGCCCAGCACCAAGGCGAGCTCCGGGCTCAGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000352980.8
ENST00000377046.7
CDS-3UTR GCA 90 bp GTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGTGTCCCGTCCTGGCTGGGCTaGCACTGCCCTACGGGCGGC +
Preference number: 4 (lower is better)
Translates to: VGYQPQSCCRLGTAVGSVPSWLG*HCPTGG
Trigger: GCCGCCCGTAGGGCAGTGGCAGCCCAGCCAGGACGG...GACACTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000534650.5
CDS-3UTR GCA 90 bp TCTGAGCCCGGAGCTCGCCTTGGTGCTGGGCACCAGTGGGCCCCTGCCAGGCCTACTCGATCAGCAGCTTaGCGTAGCCCCGGCGCTGGT +
Preference number: 4 (lower is better)
Translates to: SEPGARLGAGHQWAPARPTRSAA*RSPGAG
Trigger: ACCAGCGCCGGGGCTACGGCAAGCTGCTGATCGAGT...AGGCCTGGCAGGGGCCCACTGGTGCCCAGCACCAAGGCGAGCTCCGGGCTCAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000534650.5
CDS-3UTR GCA 90 bp GCGGGGTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGTGCTTTGTGGGAGCTaGAGTGGGGGCGGGGTGGGC +
Preference number: 4 (lower is better)
Translates to: AGWAISPSPAAVLALQWAVLCGS*SGGGVG
Trigger: GCCCACCCCGCCCCCACTGCAGCTCCCACAAAGCAC...TGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCACCCCGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000533596.1
ENST00000534650.5
CDS-3UTR GCA 90 bp TCTGAGCCCGGAGCTCGCCTTGGTGCTGGGCACCAGTGGGCCCCTGCCAGGCCTTGCGAGGGGCAAGACTaGCCCTGTGACTCGGGGGAA +
Preference number: 4 (lower is better)
Translates to: SEPGARLGAGHQWAPARPCEGQD*PCDSGE
Trigger: TTCCCCCGAGTCACAGGGGCAGTCTTGCCCCTCGCA...AGGCCTGGCAGGGGCCCACTGGTGCCCAGCACCAAGGCGAGCTCCGGGCTCAGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000352980.8
ENST00000377046.7
CDS-3UTR CCA 90 bp TCTGAGCCCGGAGCTCGCCTTGGTGCTGGGCACCAGTGGGCCCCTGCCAGGCCTCACTTCCGGCCCCTCTaGGAGACGTCACTTCCGGGA +
Preference number: 4 (lower is better)
Translates to: SEPGARLGAGHQWAPARPHFRPL*ETSLPG
Trigger: TCCCGGAAGTGACGTCTCCCAGAGGGGCCGGAAGTG...AGGCCTGGCAGGGGCCCACTGGTGCCCAGCACCAAGGCGAGCTCCGGGCTCAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352980.8
ENST00000377046.7
CDS-3UTR TCA 90 bp TCTGAGCCCGGAGCTCGCCTTGGTGCTGGGCACCAGTGGGCCCCTGCCAGGCCTCACCTTCCGTTTCGTTaGGCGGTGGTTGGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: SEPGARLGAGHQWAPARPHLPFR*AVVGLQ
Trigger: CTGCAGCCCAACCACCGCTCAACGAAACGGAAGGTG...AGGCCTGGCAGGGGCCCACTGGTGCCCAGCACCAAGGCGAGCTCCGGGCTCAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341318.9
ENST00000377046.7
CDS-3UTR TCA 90 bp GCGGGGTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAAGAAGTACCACGGCTTaGGGCGGTGCCGGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: AGWAISPSPAAVLALQWARSTTA*GGAGPA
Trigger: AGCTGGGCCGGCACCGCCTCAAGCCGTGGTACTTCT...TGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCACCCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000534650.5
CDS-3UTR GCA 90 bp GGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGTGTCTGGTCTTCCCGCTGGCCTaGGCCGAGGCCGGCACCTCT +
Preference number: 4 (lower is better)
Translates to: GLSAPVLLPSWHCSGQCLVFPLA*AEAGTS
Trigger: AGAGGTGCCGGCCTCGGCGCAGGCCAGCGGGAAGAC...CAGACACTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341318.9
ENST00000377046.7
CDS-3UTR GCA 90 bp GCGGGGTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGAGCGGTGGTTGGGCTaGAGGCAGGAGCTGGAGGAG +
Preference number: 4 (lower is better)
Translates to: AGWAISPSPAAVLALQWAERWLG*RQELEE
Trigger: CTCCTCCAGCTCCTGCCTGCAGCCCAACCACCGCTC...TGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCACCCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341318.9
ENST00000377046.7
CDS-3UTR GCA 90 bp CGGGGTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGGAGCGGTGGTTGGGCTaGAGGCAGGAGCTGGAGGAG +
Preference number: 4 (lower is better)
Translates to: RGGLSAPVLLPSWHCSGQERWLG*RQELEE
Trigger: CTCCTCCAGCTCCTGCCTGCAGCCCAACCACCGCTC...CTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCACCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341318.9
ENST00000377046.7
CDS-3UTR GCA 90 bp CGGGGTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGTGGCTGGGCTGCCACTaGCCTACGGGCGGCTCCATT +
Preference number: 4 (lower is better)
Translates to: RGGLSAPVLLPSWHCSGQWLGCH*PTGGSI
Trigger: AATGGAGCCGCCCGTAGGGCAGTGGCAGCCCAGCCA...CTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCACCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000534650.5
CDS-3UTR GCA 90 bp GCGGGGTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCATGGCTGGGCTGCCACTaGCCTACGGGCGGCTCCATT +
Preference number: 4 (lower is better)
Translates to: AGWAISPSPAAVLALQWAWLGCH*PTGGSI
Trigger: AATGGAGCCGCCCGTAGGGCAGTGGCAGCCCAGCCA...TGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCACCCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000534650.5
CDS-3UTR GCA 90 bp GCGGGGTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCACACGGCTTGAGGCGGTaGCGGCCCAGCTCAATGCAC +
Preference number: 4 (lower is better)
Translates to: AGWAISPSPAAVLALQWAHGLRR*RPSSMH
Trigger: GTGCATTGAGCTGGGCCGGCACCGCCTCAAGCCGTG...TGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCACCCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000534650.5
CDS-3UTR GCA 90 bp TCTGAGCCCGGAGCTCGCCTTGGTGCTGGGCACCAGTGGGCCCCTGCCAGGCCTCTGCCGTCTTGGCACTaGAGTGGGCAGTGTCTGGTC +
Preference number: 4 (lower is better)
Translates to: SEPGARLGAGHQWAPARPLPSWH*SGQCLV
Trigger: GACCAGACACTGCCCACTGCAGTGCCAAGACGGCAG...AGGCCTGGCAGGGGCCCACTGGTGCCCAGCACCAAGGCGAGCTCCGGGCTCAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000533596.1
ENST00000534650.5
CDS-3UTR GCA 90 bp TCTGAGCCCGGAGCTCGCCTTGGTGCTGGGCACCAGTGGGCCCCTGCCAGGCCTCTCACTGTACACAGCTaGCTGGCTCCCTCTGGTCCC +
Preference number: 4 (lower is better)
Translates to: SEPGARLGAGHQWAPARPLTVHS*LAPSGP
Trigger: GGGACCAGAGGGAGCCAGGCAGCTGTGTACAGTGAG...AGGCCTGGCAGGGGCCCACTGGTGCCCAGCACCAAGGCGAGCTCCGGGCTCAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000533596.1
ENST00000534650.5
CDS-3UTR CCA 90 bp GGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGTGTCTGGCCAGGGTCGGCTACTaGGGGGCCTCGGGCTCTACC +
Preference number: 4 (lower is better)
Translates to: GLSAPVLLPSWHCSGQCLARVGY*GASGST
Trigger: GGTAGAGCCCGAGGCCCCCCAGTAGCCGACCCTGGC...CAGACACTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341318.9
ENST00000530446.5
CDS-3UTR CCA 90 bp TCTGAGCCCGGAGCTCGCCTTGGTGCTGGGCACCAGTGGGCCCCTGCCAGGCCTTCGATTATCTCCCCCTaGGGAGACAGCGCGACGCCA +
Preference number: 4 (lower is better)
Translates to: SEPGARLGAGHQWAPARPSIISP*GDSATP
Trigger: TGGCGTCGCGCTGTCTCCCCAGGGGGAGATAATCGA...AGGCCTGGCAGGGGCCCACTGGTGCCCAGCACCAAGGCGAGCTCCGGGCTCAGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341318.9
CDS-3UTR CCA 90 bp GCGGGGTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCACCGGGGCTGTCTCGCTaGGCACTGGAGTTGCTGGTG +
Preference number: 4 (lower is better)
Translates to: AGWAISPSPAAVLALQWAPGLSR*ALELLV
Trigger: CACCAGCAACTCCAGTGCCCAGCGAGACAGCCCCGG...TGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCACCCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000534650.5
CDS-3UTR CCA 90 bp CGGGGTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGCGGGCGGCTCCATTCTaGGGAAAAACCGAGGCCGGG +
Preference number: 4 (lower is better)
Translates to: RGGLSAPVLLPSWHCSGQRAAPF*GKTEAG
Trigger: CCCGGCCTCGGTTTTTCCCCAGAATGGAGCCGCCCG...CTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCACCCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000534650.5
CDS-3UTR CCA 90 bp TCTGAGCCCGGAGCTCGCCTTGGTGCTGGGCACCAGTGGGCCCCTGCCAGGCCTTTTTCGCTTCCGTCCTaGCTGGGCTGCCACTGCCCT +
Preference number: 4 (lower is better)
Translates to: SEPGARLGAGHQWAPARPFSLPS*LGCHCP
Trigger: AGGGCAGTGGCAGCCCAGCCAGGACGGAAGCGAAAA...AGGCCTGGCAGGGGCCCACTGGTGCCCAGCACCAAGGCGAGCTCCGGGCTCAGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000534650.5
CDS-3UTR CCA 90 bp TCTGAGCCCGGAGCTCGCCTTGGTGCTGGGCACCAGTGGGCCCCTGCCAGGCCTGTCCTGCTGCCGTCTTaGCACTGCAGTGGGCAGTGT +
Preference number: 4 (lower is better)
Translates to: SEPGARLGAGHQWAPARPVLLPS*HCSGQC
Trigger: ACACTGCCCACTGCAGTGCCAAGACGGCAGCAGGAC...AGGCCTGGCAGGGGCCCACTGGTGCCCAGCACCAAGGCGAGCTCCGGGCTCAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000533596.1
ENST00000534650.5
CDS-3UTR CCA 90 bp GTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGTGTCGCCCGGAGCTCGCCTTaGTGCTGGGCACCAGTGGGC +
Preference number: 4 (lower is better)
Translates to: VGYQPQSCCRLGTAVGSVARSSP*CWAPVG
Trigger: GCCCACTGGTGCCCAGCACCAAGGCGAGCTCCGGGC...GACACTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000533596.1
ENST00000534650.5
CDS-3UTR CCA 90 bp GGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGTGTCTGGCCCGGAGCTCGCCTTaGTGCTGGGCACCAGTGGGC +
Preference number: 4 (lower is better)
Translates to: GLSAPVLLPSWHCSGQCLARSSP*CWAPVG
Trigger: GCCCACTGGTGCCCAGCACCAAGGCGAGCTCCGGGC...CAGACACTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000533596.1
ENST00000534650.5
CDS-3UTR TCA 90 bp GTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGTGTCTCCGCAGGAGCCGCTTaGGCATGGCCCGCTCATGGC +
Preference number: 4 (lower is better)
Translates to: VGYQPQSCCRLGTAVGSVSAGAA*AWPAHG
Trigger: GCCATGAGCGGGCCATGCTCAAGCGGCTCCTGCGGA...GACACTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000533596.1
ENST00000534650.5
CDS-3UTR TCA 90 bp CGGGGTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGACCTTGGAGTTGGTCTaGGCCCGGAGCTCGCCTTGG +
Preference number: 4 (lower is better)
Translates to: RGGLSAPVLLPSWHCSGQTLELV*ARSSPW
Trigger: CCAAGGCGAGCTCCGGGCTCAGACCAACTCCAAGGT...CTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCACCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000533596.1
ENST00000534650.5
CDS-3UTR TCA 90 bp CGGGGTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGGGGCCTGTGGCCAGCTaGCCTTGGAGTTGGTCTGAG +
Preference number: 4 (lower is better)
Translates to: RGGLSAPVLLPSWHCSGQGPVAS*PWSWSE
Trigger: CTCAGACCAACTCCAAGGTCAGCTGGCCACAGGCCC...CTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCACCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000533596.1
ENST00000534650.5
CDS-3UTR TCA 90 bp GGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGTGTCTGCACCCTTCCACGACCTaGACTCCACCCCCAGGCCGG +
Preference number: 4 (lower is better)
Translates to: GLSAPVLLPSWHCSGQCLHPSTT*TPPPGR
Trigger: CCGGCCTGGGGGTGGAGTTCAGGTCGTGGAAGGGTG...CAGACACTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534650.5
CDS-3UTR TCA 90 bp TCTGAGCCCGGAGCTCGCCTTGGTGCTGGGCACCAGTGGGCCCCTGCCAGGCCTAGACAGGCCAGGCTATaGGACTCCACCCTTCCACGA +
Preference number: 4 (lower is better)
Translates to: SEPGARLGAGHQWAPARPRQARL*DSTLPR
Trigger: TCGTGGAAGGGTGGAGTCTCATAGCCTGGCCTGTCT...AGGCCTGGCAGGGGCCCACTGGTGCCCAGCACCAAGGCGAGCTCCGGGCTCAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534650.5
CDS-3UTR GCA 90 bp TCTGAGCCCGGAGCTCGCCTTGGTGCTGGGCACCAGTGGGCCCCTGCCAGGCCTCCAGGCTGCCAGTCATaGGTGGTGCTGACGGTATTC +
Preference number: 4 (lower is better)
Translates to: SEPGARLGAGHQWAPARPPGCQS*VVLTVF
Trigger: GAATACCGTCAGCACCACGCATGACTGGCAGCCTGG...AGGCCTGGCAGGGGCCCACTGGTGCCCAGCACCAAGGCGAGCTCCGGGCTCAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000534650.5
CDS-3UTR GCA 90 bp TCTGAGCCCGGAGCTCGCCTTGGTGCTGGGCACCAGTGGGCCCCTGCCAGGCCTGATCAGACACCAGGCTaGCAGTCATGCGTGGTGCTG +
Preference number: 4 (lower is better)
Translates to: SEPGARLGAGHQWAPARPDQTPG*QSCVVL
Trigger: CAGCACCACGCATGACTGGCAGCCTGGTGTCTGATC...AGGCCTGGCAGGGGCCCACTGGTGCCCAGCACCAAGGCGAGCTCCGGGCTCAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000534650.5
CDS-3UTR GCA 90 bp CGGGGTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGACTCGATCAGCAGCTTaGCGTAGCCCCGGCGCTGGT +
Preference number: 4 (lower is better)
Translates to: RGGLSAPVLLPSWHCSGQTRSAA*RSPGAG
Trigger: ACCAGCGCCGGGGCTACGGCAAGCTGCTGATCGAGT...CTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCACCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000534650.5
CDS-3UTR GCA 90 bp GCGGGGTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAACTCGATCAGCAGCTTaGCGTAGCCCCGGCGCTGGT +
Preference number: 4 (lower is better)
Translates to: AGWAISPSPAAVLALQWATRSAA*RSPGAG
Trigger: ACCAGCGCCGGGGCTACGGCAAGCTGCTGATCGAGT...TGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCACCCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000534650.5
CDS-3UTR GCA 90 bp GCGGGGTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCACAGCCCCAGTCCTGCTaGCGTCTTGGCACTGCAGTG +
Preference number: 4 (lower is better)
Translates to: AGWAISPSPAAVLALQWAQPQSC*RLGTAV
Trigger: CACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTG...TGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCACCCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000533596.1
ENST00000534650.5
CDS-3UTR GCA 90 bp GTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGTGTCGTGCTTTGTGGGAGCTaGAGTGGGGGCGGGGTGGGC +
Preference number: 4 (lower is better)
Translates to: VGYQPQSCCRLGTAVGSVVLCGS*SGGGVG
Trigger: GCCCACCCCGCCCCCACTGCAGCTCCCACAAAGCAC...GACACTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000533596.1
ENST00000534650.5
CDS-3UTR GCA 90 bp GCGGGGTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCATGCGAGGGGCAAGACTaGCCCTGTGACTCGGGGGAA +
Preference number: 4 (lower is better)
Translates to: AGWAISPSPAAVLALQWACEGQD*PCDSGE
Trigger: TTCCCCCGAGTCACAGGGGCAGTCTTGCCCCTCGCA...TGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCACCCCGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000352980.8
ENST00000377046.7
CDS-3UTR GCA 90 bp GTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGTGTCACACCGCGACCCAGCTaGGAGGGGCAAGACTGCCCC +
Preference number: 4 (lower is better)
Translates to: VGYQPQSCCRLGTAVGSVTPRPS*EGQDCP
Trigger: GGGGCAGTCTTGCCCCTCGCAGCTGGGTCGCGGTGT...GACACTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352980.8
ENST00000377046.7
CDS-3UTR CCA 90 bp TCTGAGCCCGGAGCTCGCCTTGGTGCTGGGCACCAGTGGGCCCCTGCCAGGCCTTCATCTTCGTTGTCCTaGTTCCGCCGCAGCACGGGT +
Preference number: 4 (lower is better)
Translates to: SEPGARLGAGHQWAPARPSSSLS*FRRSTG
Trigger: ACCCGTGCTGCGGCGGAACCAGGACAACGAAGATGA...AGGCCTGGCAGGGGCCCACTGGTGCCCAGCACCAAGGCGAGCTCCGGGCTCAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
CDS-3UTR CCA 90 bp GGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGTGTCTGGCTCGCCACCGGGAATaGCCTCCCGCTCCTTGGGCA +
Preference number: 4 (lower is better)
Translates to: GLSAPVLLPSWHCSGQCLARHRE*PPAPWA
Trigger: TGCCCAAGGAGCGGGAGGCCATTCCCGGTGGCGAGC...CAGACACTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341318.9
ENST00000377046.7
CDS-3UTR CCA 90 bp TCTGAGCCCGGAGCTCGCCTTGGTGCTGGGCACCAGTGGGCCCCTGCCAGGCCTGCAGTGGGCAGTGTCTaGTCACCACTTCCCCCTCTT +
Preference number: 4 (lower is better)
Translates to: SEPGARLGAGHQWAPARPAVGSV*SPLPPL
Trigger: AAGAGGGGGAAGTGGTGACCAGACACTGCCCACTGC...AGGCCTGGCAGGGGCCCACTGGTGCCCAGCACCAAGGCGAGCTCCGGGCTCAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000533596.1
ENST00000534650.5
CDS-3UTR CCA 90 bp CGGGGTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGTTGTGGGAGCTGCAGTaGGGGCGGGGTGGGCTATCA +
Preference number: 4 (lower is better)
Translates to: RGGLSAPVLLPSWHCSGQLWELQ*GRGGLS
Trigger: TGATAGCCCACCCCGCCCCCACTGCAGCTCCCACAA...CTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCACCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000533596.1
ENST00000534650.5
CDS-3UTR CCA 90 bp GCGGGGTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCATTGTGGGAGCTGCAGTaGGGGCGGGGTGGGCTATCA +
Preference number: 4 (lower is better)
Translates to: AGWAISPSPAAVLALQWALWELQ*GRGGLS
Trigger: TGATAGCCCACCCCGCCCCCACTGCAGCTCCCACAA...TGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCACCCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000533596.1
ENST00000534650.5
CDS-3UTR CCA 90 bp TCTGAGCCCGGAGCTCGCCTTGGTGCTGGGCACCAGTGGGCCCCTGCCAGGCCTAACGTGCACAGCCAGTaGCGGTCTACTGAGTCCGTC +
Preference number: 4 (lower is better)
Translates to: SEPGARLGAGHQWAPARPNVHSQ*RSTESV
Trigger: GACGGACTCAGTAGACCGCCACTGGCTGTGCACGTT...AGGCCTGGCAGGGGCCCACTGGTGCCCAGCACCAAGGCGAGCTCCGGGCTCAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352980.8
ENST00000377046.7
CDS-3UTR TCA 90 bp GCGGGGTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCACACCTTCCGTTTCGTTaGGCGGTGGTTGGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: AGWAISPSPAAVLALQWAHLPFR*AVVGLQ
Trigger: CTGCAGCCCAACCACCGCTCAACGAAACGGAAGGTG...TGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCACCCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341318.9
ENST00000377046.7
CDS-3UTR TCA 90 bp GTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGTGTCAGAAGTACCACGGCTTaGGGCGGTGCCGGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: VGYQPQSCCRLGTAVGSVRSTTA*GGAGPA
Trigger: AGCTGGGCCGGCACCGCCTCAAGCCGTGGTACTTCT...GACACTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000534650.5
CDS-3UTR TCA 90 bp CGGGGTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGGGACAGGCAATGTGGTaGGTTCCTGTGGGTACGGGG +
Preference number: 4 (lower is better)
Translates to: RGGLSAPVLLPSWHCSGQGQAMW*VPVGTG
Trigger: CCCCGTACCCACAGGAACTCACCACATTGCCTGTCC...CTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCACCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000534650.5
CDS-3UTR TCA 90 bp GTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGTGTCCCAGTGGCGGTCTACTaGGTCCGTCACGTGACGCCC +
Preference number: 4 (lower is better)
Translates to: VGYQPQSCCRLGTAVGSVPVAVY*VRHVTP
Trigger: GGGCGTCACGTGACGGACTCAGTAGACCGCCACTGG...GACACTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377046.7
CDS-3UTR GCA 90 bp GGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGTGTCTGTGGCTGGGCTGCCACTaGCCTACGGGCGGCTCCATT +
Preference number: 4 (lower is better)
Translates to: GLSAPVLLPSWHCSGQCLWLGCH*PTGGSI
Trigger: AATGGAGCCGCCCGTAGGGCAGTGGCAGCCCAGCCA...CAGACACTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000534650.5
CDS-3UTR GCA 90 bp GTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGTGTCTGGCTGGGCTGCCACTaGCCTACGGGCGGCTCCATT +
Preference number: 4 (lower is better)
Translates to: VGYQPQSCCRLGTAVGSVWLGCH*PTGGSI
Trigger: AATGGAGCCGCCCGTAGGGCAGTGGCAGCCCAGCCA...GACACTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000534650.5
CDS-3UTR GCA 90 bp CGGGGTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGCTGCCGTCTTGGCACTaGAGTGGGCAGTGTCTGGTC +
Preference number: 4 (lower is better)
Translates to: RGGLSAPVLLPSWHCSGQLPSWH*SGQCLV
Trigger: GACCAGACACTGCCCACTGCAGTGCCAAGACGGCAG...CTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCACCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000533596.1
ENST00000534650.5
CDS-3UTR GCA 90 bp GCGGGGTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCACTGCCGTCTTGGCACTaGAGTGGGCAGTGTCTGGTC +
Preference number: 4 (lower is better)
Translates to: AGWAISPSPAAVLALQWALPSWH*SGQCLV
Trigger: GACCAGACACTGCCCACTGCAGTGCCAAGACGGCAG...TGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCACCCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000533596.1
ENST00000534650.5
CDS-3UTR GCA 90 bp GTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGTGTCGCTCCCTCTGGTCCCTaGTTCAGAGGAGGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: VGYQPQSCCRLGTAVGSVAPSGP*FRGGLG
Trigger: GCCCAGGCCTCCTCTGAAGCAGGGACCAGAGGGAGC...GACACTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000533596.1
ENST00000534650.5
CDS-3UTR GCA 90 bp GGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGTGTCTGGCTCCCTCTGGTCCCTaGTTCAGAGGAGGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: GLSAPVLLPSWHCSGQCLAPSGP*FRGGLG
Trigger: GCCCAGGCCTCCTCTGAAGCAGGGACCAGAGGGAGC...CAGACACTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000533596.1
ENST00000534650.5
CDS-3UTR GCA 90 bp CGGGGTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGCTCACTGTACACAGCTaGCTGGCTCCCTCTGGTCCC +
Preference number: 4 (lower is better)
Translates to: RGGLSAPVLLPSWHCSGQLTVHS*LAPSGP
Trigger: GGGACCAGAGGGAGCCAGGCAGCTGTGTACAGTGAG...CTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCACCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000533596.1
ENST00000534650.5
CDS-3UTR GCA 90 bp TCTGAGCCCGGAGCTCGCCTTGGTGCTGGGCACCAGTGGGCCCCTGCCAGGCCTGGAAACCCCATAACGTaGACAGCCAGTGGCGGTCTA +
Preference number: 4 (lower is better)
Translates to: SEPGARLGAGHQWAPARPGNPIT*TASGGL
Trigger: TAGACCGCCACTGGCTGTGCACGTTATGGGGTTTCC...AGGCCTGGCAGGGGCCCACTGGTGCCCAGCACCAAGGCGAGCTCCGGGCTCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352980.8
ENST00000377046.7
CDS-3UTR CCA 90 bp GCGGGGTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCATCGATTATCTCCCCCTaGGGAGACAGCGCGACGCCA +
Preference number: 4 (lower is better)
Translates to: AGWAISPSPAAVLALQWASIISP*GDSATP
Trigger: TGGCGTCGCGCTGTCTCCCCAGGGGGAGATAATCGA...TGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCACCCCGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341318.9
ENST00000530446.5
CDS-3UTR CCA 90 bp GTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGTGTCCGGCACCTCTCTCTCTaGAGAGCCAGGACGGGACCC +
Preference number: 4 (lower is better)
Translates to: VGYQPQSCCRLGTAVGSVRHLSL*RARTGP
Trigger: GGGTCCCGTCCTGGCTCTCCAGAGAGAGAGGTGCCG...GACACTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341318.9
ENST00000377046.7
CDS-3UTR CCA 90 bp GGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGTGTCTGCGGCACCTCTCTCTCTaGAGAGCCAGGACGGGACCC +
Preference number: 4 (lower is better)
Translates to: GLSAPVLLPSWHCSGQCLRHLSL*RARTGP
Trigger: GGGTCCCGTCCTGGCTCTCCAGAGAGAGAGGTGCCG...CAGACACTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341318.9
ENST00000377046.7
CDS-3UTR CCA 90 bp CGGGGTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGGATCTGGACCGGGATTaGCAAGGTCTTCCCGCTGGC +
Preference number: 4 (lower is better)
Translates to: RGGLSAPVLLPSWHCSGQDLDRD*QGLPAG
Trigger: GCCAGCGGGAAGACCTTGCCAATCCCGGTCCAGATC...CTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCACCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341318.9
ENST00000377046.7
CDS-3UTR CCA 90 bp TCTGAGCCCGGAGCTCGCCTTGGTGCTGGGCACCAGTGGGCCCCTGCCAGGCCTAAGCGGAGTGTGATCTaGACCGGGATTGGCAAGGTC +
Preference number: 4 (lower is better)
Translates to: SEPGARLGAGHQWAPARPKRSVI*TGIGKV
Trigger: GACCTTGCCAATCCCGGTCCAGATCACACTCCGCTT...AGGCCTGGCAGGGGCCCACTGGTGCCCAGCACCAAGGCGAGCTCCGGGCTCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341318.9
ENST00000377046.7
CDS-3UTR CCA 90 bp CGGGGTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGCGTTTCGTTGAGCGGTaGTTGGGCTGCAGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: RGGLSAPVLLPSWHCSGQRFVER*LGCRQE
Trigger: CTCCTGCCTGCAGCCCAACCACCGCTCAACGAAACG...CTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCACCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341318.9
ENST00000377046.7
CDS-3UTR CCA 90 bp GTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGTGTCCCGGGGCTGTCTCGCTaGGCACTGGAGTTGCTGGTG +
Preference number: 4 (lower is better)
Translates to: VGYQPQSCCRLGTAVGSVPGLSR*ALELLV
Trigger: CACCAGCAACTCCAGTGCCCAGCGAGACAGCCCCGG...GACACTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000534650.5
CDS-3UTR CCA 90 bp GGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGTGTCTGCGGGCGGCTCCATTCTaGGGAAAAACCGAGGCCGGG +
Preference number: 4 (lower is better)
Translates to: GLSAPVLLPSWHCSGQCLRAAPF*GKTEAG
Trigger: CCCGGCCTCGGTTTTTCCCCAGAATGGAGCCGCCCG...CAGACACTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000534650.5
CDS-3UTR CCA 90 bp GTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGTGTCCGGGCGGCTCCATTCTaGGGAAAAACCGAGGCCGGG +
Preference number: 4 (lower is better)
Translates to: VGYQPQSCCRLGTAVGSVRAAPF*GKTEAG
Trigger: CCCGGCCTCGGTTTTTCCCCAGAATGGAGCCGCCCG...GACACTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000534650.5
CDS-3UTR CCA 90 bp CGGGGTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGTTTTCGCTTCCGTCCTaGCTGGGCTGCCACTGCCCT +
Preference number: 4 (lower is better)
Translates to: RGGLSAPVLLPSWHCSGQFSLPS*LGCHCP
Trigger: AGGGCAGTGGCAGCCCAGCCAGGACGGAAGCGAAAA...CTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCACCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000534650.5
CDS-3UTR CCA 90 bp TCTGAGCCCGGAGCTCGCCTTGGTGCTGGGCACCAGTGGGCCCCTGCCAGGCCTGTGACGATGTCGTCGTaGCTTCGATCAGACACCAGG +
Preference number: 4 (lower is better)
Translates to: SEPGARLGAGHQWAPARPVTMSS*LRSDTR
Trigger: CCTGGTGTCTGATCGAAGCCACGACGACATCGTCAC...AGGCCTGGCAGGGGCCCACTGGTGCCCAGCACCAAGGCGAGCTCCGGGCTCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000534650.5
CDS-3UTR CCA 90 bp GCGGGGTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGTCCTGCTGCCGTCTTaGCACTGCAGTGGGCAGTGT +
Preference number: 4 (lower is better)
Translates to: AGWAISPSPAAVLALQWAVLLPS*HCSGQC
Trigger: ACACTGCCCACTGCAGTGCCAAGACGGCAGCAGGAC...TGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCACCCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000533596.1
ENST00000534650.5
CDS-3UTR TCA 90 bp GCGGGGTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGACTACGGCCGTACTTaGGGCAGAACTCGCACAGGT +
Preference number: 4 (lower is better)
Translates to: AGWAISPSPAAVLALQWADYGRT*GRTRTG
Trigger: ACCTGTGCGAGTTCTGCCTCAAGTACGGCCGTAGTC...TGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCACCCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000534650.5
CDS-3UTR TCA 90 bp TCTGAGCCCGGAGCTCGCCTTGGTGCTGGGCACCAGTGGGCCCCTGCCAGGCCTTGTCCTCTGACAGTGTaGGGATGTACTGGCCCTTGT +
Preference number: 4 (lower is better)
Translates to: SEPGARLGAGHQWAPARPCPLTV*GCTGPC
Trigger: ACAAGGGCCAGTACATCCTCACACTGTCAGAGGACA...AGGCCTGGCAGGGGCCCACTGGTGCCCAGCACCAAGGCGAGCTCCGGGCTCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000533596.1
ENST00000534650.5
CDS-3UTR TCA 90 bp TCTGAGCCCGGAGCTCGCCTTGGTGCTGGGCACCAGTGGGCCCCTGCCAGGCCTTCCAGTCCTTGGGAGTaGAGTGCAGACACTTGGAGT +
Preference number: 4 (lower is better)
Translates to: SEPGARLGAGHQWAPARPSSPWE*SADTWS
Trigger: ACTCCAAGTGTCTGCACTTCACTCCCAAGGACTGGA...AGGCCTGGCAGGGGCCCACTGGTGCCCAGCACCAAGGCGAGCTCCGGGCTCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000533596.1
ENST00000534650.5
CDS-3UTR TCA 90 bp GGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGTGTCTGACCTTGGAGTTGGTCTaGGCCCGGAGCTCGCCTTGG +
Preference number: 4 (lower is better)
Translates to: GLSAPVLLPSWHCSGQCLTLELV*ARSSPW
Trigger: CCAAGGCGAGCTCCGGGCTCAGACCAACTCCAAGGT...CAGACACTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000533596.1
ENST00000534650.5
CDS-3UTR TCA 90 bp GTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGTGTCACCTTGGAGTTGGTCTaGGCCCGGAGCTCGCCTTGG +
Preference number: 4 (lower is better)
Translates to: VGYQPQSCCRLGTAVGSVTLELV*ARSSPW
Trigger: CCAAGGCGAGCTCCGGGCTCAGACCAACTCCAAGGT...GACACTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000533596.1
ENST00000534650.5
CDS-3UTR TCA 90 bp GGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGTGTCTGGGGCCTGTGGCCAGCTaGCCTTGGAGTTGGTCTGAG +
Preference number: 4 (lower is better)
Translates to: GLSAPVLLPSWHCSGQCLGPVAS*PWSWSE
Trigger: CTCAGACCAACTCCAAGGTCAGCTGGCCACAGGCCC...CAGACACTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000533596.1
ENST00000534650.5
CDS-3UTR TCA 90 bp GTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGTGTCGGGCCTGTGGCCAGCTaGCCTTGGAGTTGGTCTGAG +
Preference number: 4 (lower is better)
Translates to: VGYQPQSCCRLGTAVGSVGPVAS*PWSWSE
Trigger: CTCAGACCAACTCCAAGGTCAGCTGGCCACAGGCCC...GACACTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000533596.1
ENST00000534650.5
CDS-3UTR TCA 90 bp GTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGTGTCGTAGAGGGGGACCTTTaGGAGACACCGCGACCCAGC +
Preference number: 4 (lower is better)
Translates to: VGYQPQSCCRLGTAVGSVVEGDL*ETPRPS
Trigger: GCTGGGTCGCGGTGTCTCTCAAAGGTCCCCCTCTAC...GACACTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000352980.8
ENST00000377046.7
CDS-3UTR GCA 90 bp CGGGGTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGCCAGGCTGCCAGTCATaGGTGGTGCTGACGGTATTC +
Preference number: 4 (lower is better)
Translates to: RGGLSAPVLLPSWHCSGQPGCQS*VVLTVF
Trigger: GAATACCGTCAGCACCACGCATGACTGGCAGCCTGG...CTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCACCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000534650.5
CDS-3UTR GCA 90 bp GGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGTGTCTGACTCGATCAGCAGCTTaGCGTAGCCCCGGCGCTGGT +
Preference number: 4 (lower is better)
Translates to: GLSAPVLLPSWHCSGQCLTRSAA*RSPGAG
Trigger: ACCAGCGCCGGGGCTACGGCAAGCTGCTGATCGAGT...CAGACACTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000534650.5
CDS-3UTR GCA 90 bp GTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGTGTCCAGCCCCAGTCCTGCTaGCGTCTTGGCACTGCAGTG +
Preference number: 4 (lower is better)
Translates to: VGYQPQSCCRLGTAVGSVQPQSC*RLGTAV
Trigger: CACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTG...GACACTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000533596.1
ENST00000534650.5
CDS-3UTR GCA 90 bp CGGGGTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGTATCAGCCCCAGTCCTaGTGCCGTCTTGGCACTGCA +
Preference number: 4 (lower is better)
Translates to: RGGLSAPVLLPSWHCSGQYQPQS*CRLGTA
Trigger: TGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATA...CTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCACCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000533596.1
ENST00000534650.5
CDS-3UTR GCA 90 bp CCAGCCCTCTGTACAGAGCTCCCCCATCCGGATCCCTTCTCACTGTACACAGCTCGGAGCTCGCCTTGGTaGTGGGCACCAGTGGGCCCC +
Preference number: 4 (lower is better)
Translates to: PALCTELPHPDPFSLYTARSSPW*WAPVGP
Trigger: GGGGCCCACTGGTGCCCAGCACCAAGGCGAGCTCCG...AGCTGTGTACAGTGAGAAGGGATCCGGATGGGGGAGCTCTGTACAGAGGGCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000533596.1
ENST00000534650.5
CDS-3UTR GCA 90 bp TCTGAGCCCGGAGCTCGCCTTGGTGCTGGGCACCAGTGGGCCCCTGCCAGGCCTGAAGCCAGAAATTTTTaGAGCCAGCACCCACCCCAC +
Preference number: 4 (lower is better)
Translates to: SEPGARLGAGHQWAPARPEARNF*SQHPPH
Trigger: GTGGGGTGGGTGCTGGCTGCAAAAATTTCTGGCTTC...AGGCCTGGCAGGGGCCCACTGGTGCCCAGCACCAAGGCGAGCTCCGGGCTCAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000533596.1
ENST00000534650.5
CDS-3UTR CCA 90 bp CCAGCCCTCTGTACAGAGCTCCCCCATCCGGATCCCTTCTCACTGTACACAGCTGCAAGGTCTTCCCGCTaGCCTGCGCCGAGGCCGGCA +
Preference number: 4 (lower is better)
Translates to: PALCTELPHPDPFSLYTAARSSR*PAPRPA
Trigger: TGCCGGCCTCGGCGCAGGCCAGCGGGAAGACCTTGC...AGCTGTGTACAGTGAGAAGGGATCCGGATGGGGGAGCTCTGTACAGAGGGCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341318.9
ENST00000377046.7
CDS-3UTR CCA 90 bp GCGGGGTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCACCATCAGAGCTGTCCTaGGAGTCCTCATCAGTGCCC +
Preference number: 4 (lower is better)
Translates to: AGWAISPSPAAVLALQWAPSELS*ESSSVP
Trigger: GGGCACTGATGAGGACTCCCAGGACAGCTCTGATGG...TGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCACCCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000534650.5
CDS-3UTR CCA 90 bp TCTGAGCCCGGAGCTCGCCTTGGTGCTGGGCACCAGTGGGCCCCTGCCAGGCCTTCAGGATCTCCAGGATaGTCTGGGACCAGTAGCTTC +
Preference number: 4 (lower is better)
Translates to: SEPGARLGAGHQWAPARPSGSPG*SGTSSF
Trigger: GAAGCTACTGGTCCCAGACCATCCTGGAGATCCTGA...AGGCCTGGCAGGGGCCCACTGGTGCCCAGCACCAAGGCGAGCTCCGGGCTCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000534650.5
CDS-3UTR CCA 90 bp GCGGGGTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAAGCATGGCCCGCTCATaGCCATCCACGATGTCCTCT +
Preference number: 4 (lower is better)
Translates to: AGWAISPSPAAVLALQWASMARS*PSTMSS
Trigger: AGAGGACATCGTGGATGGCCATGAGCGGGCCATGCT...TGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCACCCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000533596.1
ENST00000534650.5
CDS-3UTR CCA 90 bp CGGGGTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGAGCATGGCCCGCTCATaGCCATCCACGATGTCCTCT +
Preference number: 4 (lower is better)
Translates to: RGGLSAPVLLPSWHCSGQSMARS*PSTMSS
Trigger: AGAGGACATCGTGGATGGCCATGAGCGGGCCATGCT...CTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCACCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000533596.1
ENST00000534650.5
CDS-3UTR CCA 90 bp CGGGGTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGGCAGTGGGCAGTGTCTaGTCACCACTTCCCCCTCTT +
Preference number: 4 (lower is better)
Translates to: RGGLSAPVLLPSWHCSGQAVGSV*SPLPPL
Trigger: AAGAGGGGGAAGTGGTGACCAGACACTGCCCACTGC...CTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCACCCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000533596.1
ENST00000534650.5
CDS-3UTR CCA 90 bp GCGGGGTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGTCTTGGCACTGCAGTaGGCAGTGTCTGGTCACCAC +
Preference number: 4 (lower is better)
Translates to: AGWAISPSPAAVLALQWAVLALQ*AVSGHH
Trigger: GTGGTGACCAGACACTGCCCACTGCAGTGCCAAGAC...TGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCACCCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000533596.1
ENST00000534650.5
CDS-3UTR CCA 90 bp CGGGGTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGGTCTTGGCACTGCAGTaGGCAGTGTCTGGTCACCAC +
Preference number: 4 (lower is better)
Translates to: RGGLSAPVLLPSWHCSGQVLALQ*AVSGHH
Trigger: GTGGTGACCAGACACTGCCCACTGCAGTGCCAAGAC...CTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCACCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000533596.1
ENST00000534650.5
CDS-3UTR CCA 90 bp GTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGTGTCTTGTGGGAGCTGCAGTaGGGGCGGGGTGGGCTATCA +
Preference number: 4 (lower is better)
Translates to: VGYQPQSCCRLGTAVGSVLWELQ*GRGGLS
Trigger: TGATAGCCCACCCCGCCCCCACTGCAGCTCCCACAA...GACACTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000533596.1
ENST00000534650.5
CDS-3UTR CCA 90 bp GGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGTGTCTGTTGTGGGAGCTGCAGTaGGGGCGGGGTGGGCTATCA +
Preference number: 4 (lower is better)
Translates to: GLSAPVLLPSWHCSGQCLLWELQ*GRGGLS
Trigger: TGATAGCCCACCCCGCCCCCACTGCAGCTCCCACAA...CAGACACTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000533596.1
ENST00000534650.5
CDS-3UTR CCA 90 bp GCGGGGTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAAACGTGCACAGCCAGTaGCGGTCTACTGAGTCCGTC +
Preference number: 4 (lower is better)
Translates to: AGWAISPSPAAVLALQWANVHSQ*RSTESV
Trigger: GACGGACTCAGTAGACCGCCACTGGCTGTGCACGTT...TGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCACCCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352980.8
ENST00000377046.7
CDS-3UTR CCA 90 bp CGGGGTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGAGGCCGAGCCCTAGGTaGAAACCCCATAACGTGCAC +
Preference number: 4 (lower is better)
Translates to: RGGLSAPVLLPSWHCSGQRPSPR*KPHNVH
Trigger: GTGCACGTTATGGGGTTTCCACCTAGGGCTCGGCCT...CTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCACCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000352980.8
ENST00000377046.7
CDS-3UTR CCA 90 bp GGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGTGTCTGCACTTCCGGCCCCTCTaGGAGACGTCACTTCCGGGA +
Preference number: 4 (lower is better)
Translates to: GLSAPVLLPSWHCSGQCLHFRPL*ETSLPG
Trigger: TCCCGGAAGTGACGTCTCCCAGAGGGGCCGGAAGTG...CAGACACTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352980.8
ENST00000377046.7
CDS-3UTR CCA 90 bp CGGGGTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGTTTCACCTCTCTCTCTaGAGAGCCAGGACGGGACCC +
Preference number: 4 (lower is better)
Translates to: RGGLSAPVLLPSWHCSGQFHLSL*RARTGP
Trigger: GGGTCCCGTCCTGGCTCTCCAGAGAGAGAGGTGAAA...CTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCACCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000352980.8
ENST00000530446.5
ENST00000534650.5
CDS-3UTR CCA 90 bp CGGGGTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGCTTGATGGTGATCTGTaGCCTCTCCCCGCTCTCCGA +
Preference number: 4 (lower is better)
Translates to: RGGLSAPVLLPSWHCSGQLDGDL*PLPALR
Trigger: TCGGAGAGCGGGGAGAGGCCACAGATCACCATCAAG...CTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCACCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000533596.1
CDS-3UTR TCA 90 bp GCGGGGTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAAAAGCTTCCGGCCACTaGTGTCCTTCACGCTCAGGA +
Preference number: 4 (lower is better)
Translates to: AGWAISPSPAAVLALQWAKASGH*CPSRSG
Trigger: TCCTGAGCGTGAAGGACATCAGTGGCCGGAAGCTTT...TGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCACCCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000534650.5
CDS-3UTR TCA 90 bp GCGGGGTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCATGTTCTTCATCCGGGTaGCGATGTCGTCGTGGCTTC +
Preference number: 4 (lower is better)
Translates to: AGWAISPSPAAVLALQWACSSSG*RCRRGF
Trigger: GAAGCCACGACGACATCGTCACCCGGATGAAGAACA...TGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCACCCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000534650.5
CDS-3UTR TCA 90 bp CGGGGTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGTGTTCTTCATCCGGGTaGCGATGTCGTCGTGGCTTC +
Preference number: 4 (lower is better)
Translates to: RGGLSAPVLLPSWHCSGQCSSSG*RCRRGF
Trigger: GAAGCCACGACGACATCGTCACCCGGATGAAGAACA...CTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCACCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000534650.5
CDS-3UTR TCA 90 bp GGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGTGTCTGGGACAGGCAATGTGGTaGGTTCCTGTGGGTACGGGG +
Preference number: 4 (lower is better)
Translates to: GLSAPVLLPSWHCSGQCLGQAMW*VPVGTG
Trigger: CCCCGTACCCACAGGAACTCACCACATTGCCTGTCC...CAGACACTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000534650.5
CDS-3UTR TCA 90 bp TCTGAGCCCGGAGCTCGCCTTGGTGCTGGGCACCAGTGGGCCCCTGCCAGGCCTATCCACGATGTCCTCTaGCAGTGTGAGGATGTACTG +
Preference number: 4 (lower is better)
Translates to: SEPGARLGAGHQWAPARPIHDVL*QCEDVL
Trigger: CAGTACATCCTCACACTGTCAGAGGACATCGTGGAT...AGGCCTGGCAGGGGCCCACTGGTGCCCAGCACCAAGGCGAGCTCCGGGCTCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000533596.1
ENST00000534650.5
CDS-3UTR TCA 90 bp CCAGCCCTCTGTACAGAGCTCCCCCATCCGGATCCCTTCTCACTGTACACAGCTTCCGCAGGAGCCGCTTaGGCATGGCCCGCTCATGGC +
Preference number: 4 (lower is better)
Translates to: PALCTELPHPDPFSLYTASAGAA*AWPAHG
Trigger: GCCATGAGCGGGCCATGCTCAAGCGGCTCCTGCGGA...AGCTGTGTACAGTGAGAAGGGATCCGGATGGGGGAGCTCTGTACAGAGGGCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000533596.1
ENST00000534650.5
CDS-3UTR GCA 90 bp GCGGGGTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAAGGTCCAGCCGCTCATaGGTCACCCATTCATCCAGA +
Preference number: 4 (lower is better)
Translates to: AGWAISPSPAAVLALQWARSSRS*VTHSSR
Trigger: TCTGGATGAATGGGTGACGCATGAGCGGCTGGACCT...TGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCACCCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000534650.5
CDS-3UTR GCA 90 bp TCTGAGCCCGGAGCTCGCCTTGGTGCTGGGCACCAGTGGGCCCCTGCCAGGCCTAGGAGATGGTGCCCTTaGGGTAAATCTCATTGCCTG +
Preference number: 4 (lower is better)
Translates to: SEPGARLGAGHQWAPARPRRWCP*GKSHCL
Trigger: CAGGCAATGAGATTTACCGCAAGGGCACCATCTCCT...AGGCCTGGCAGGGGCCCACTGGTGCCCAGCACCAAGGCGAGCTCCGGGCTCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000534650.5
CDS-3UTR GCA 90 bp CCAGCCCTCTGTACAGAGCTCCCCCATCCGGATCCCTTCTCACTGTACACAGCTGTGCTTTGTGGGAGCTaGAGTGGGGGCGGGGTGGGC +
Preference number: 4 (lower is better)
Translates to: PALCTELPHPDPFSLYTAVLCGS*SGGGVG
Trigger: GCCCACCCCGCCCCCACTGCAGCTCCCACAAAGCAC...AGCTGTGTACAGTGAGAAGGGATCCGGATGGGGGAGCTCTGTACAGAGGGCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000533596.1
ENST00000534650.5
CDS-3UTR GCA 90 bp GGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGTGTCTGCTCACTGTACACAGCTaGCTGGCTCCCTCTGGTCCC +
Preference number: 4 (lower is better)
Translates to: GLSAPVLLPSWHCSGQCLLTVHS*LAPSGP
Trigger: GGGACCAGAGGGAGCCAGGCAGCTGTGTACAGTGAG...CAGACACTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000533596.1
ENST00000534650.5
CDS-3UTR GCA 90 bp CCAGCCCTCTGTACAGAGCTCCCCCATCCGGATCCCTTCTCACTGTACACAGCTACACCGCGACCCAGCTaGGAGGGGCAAGACTGCCCC +
Preference number: 4 (lower is better)
Translates to: PALCTELPHPDPFSLYTATPRPS*EGQDCP
Trigger: GGGGCAGTCTTGCCCCTCGCAGCTGGGTCGCGGTGT...AGCTGTGTACAGTGAGAAGGGATCCGGATGGGGGAGCTCTGTACAGAGGGCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000352980.8
ENST00000377046.7
CDS-3UTR CCA 90 bp GTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGTGTCGATCTGGACCGGGATTaGCAAGGTCTTCCCGCTGGC +
Preference number: 4 (lower is better)
Translates to: VGYQPQSCCRLGTAVGSVDLDRD*QGLPAG
Trigger: GCCAGCGGGAAGACCTTGCCAATCCCGGTCCAGATC...GACACTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341318.9
ENST00000377046.7
CDS-3UTR CCA 90 bp CGGGGTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGAAGCGGAGTGTGATCTaGACCGGGATTGGCAAGGTC +
Preference number: 4 (lower is better)
Translates to: RGGLSAPVLLPSWHCSGQKRSVI*TGIGKV
Trigger: GACCTTGCCAATCCCGGTCCAGATCACACTCCGCTT...CTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCACCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341318.9
ENST00000377046.7
CDS-3UTR CCA 90 bp CCAGCCCTCTGTACAGAGCTCCCCCATCCGGATCCCTTCTCACTGTACACAGCTCTGGAGGAGAGCGGCTaGTCAGGCTCGCCACCGGGA +
Preference number: 4 (lower is better)
Translates to: PALCTELPHPDPFSLYTALEESG*SGSPPG
Trigger: TCCCGGTGGCGAGCCTGACCAGCCGCTCTCCTCCAG...AGCTGTGTACAGTGAGAAGGGATCCGGATGGGGGAGCTCTGTACAGAGGGCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341318.9
ENST00000377046.7
CDS-3UTR CCA 90 bp GGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGTGTCTGCGTTTCGTTGAGCGGTaGTTGGGCTGCAGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: GLSAPVLLPSWHCSGQCLRFVER*LGCRQE
Trigger: CTCCTGCCTGCAGCCCAACCACCGCTCAACGAAACG...CAGACACTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341318.9
ENST00000377046.7
CDS-3UTR CCA 90 bp GGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGTGTCTGTTTTCGCTTCCGTCCTaGCTGGGCTGCCACTGCCCT +
Preference number: 4 (lower is better)
Translates to: GLSAPVLLPSWHCSGQCLFSLPS*LGCHCP
Trigger: AGGGCAGTGGCAGCCCAGCCAGGACGGAAGCGAAAA...CAGACACTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000534650.5
CDS-3UTR CCA 90 bp CGGGGTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGGTGACGATGTCGTCGTaGCTTCGATCAGACACCAGG +
Preference number: 4 (lower is better)
Translates to: RGGLSAPVLLPSWHCSGQVTMSS*LRSDTR
Trigger: CCTGGTGTCTGATCGAAGCCACGACGACATCGTCAC...CTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCACCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000534650.5
CDS-3UTR CCA 90 bp GCGGGGTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAATTGATGGTGATCTGTaGCCTCTCCCCGCTCTCCGA +
Preference number: 4 (lower is better)
Translates to: AGWAISPSPAAVLALQWAIDGDL*PLPALR
Trigger: TCGGAGAGCGGGGAGAGGCCACAGATCACCATCAAT...TGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCACCCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000534650.5
CDS-3UTR CCA 90 bp GGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGTGTCTGGTCCTGCTGCCGTCTTaGCACTGCAGTGGGCAGTGT +
Preference number: 4 (lower is better)
Translates to: GLSAPVLLPSWHCSGQCLVLLPS*HCSGQC
Trigger: ACACTGCCCACTGCAGTGCCAAGACGGCAGCAGGAC...CAGACACTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000533596.1
ENST00000534650.5
CDS-3UTR CCA 90 bp GTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGTGTCGTCCTGCTGCCGTCTTaGCACTGCAGTGGGCAGTGT +
Preference number: 4 (lower is better)
Translates to: VGYQPQSCCRLGTAVGSVVLLPS*HCSGQC
Trigger: ACACTGCCCACTGCAGTGCCAAGACGGCAGCAGGAC...GACACTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000533596.1
ENST00000534650.5
CDS-3UTR TCA 90 bp CGGGGTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGAGTCATGCGTGGTGCTaGCGGTATTCCATCAGAGCT +
Preference number: 4 (lower is better)
Translates to: RGGLSAPVLLPSWHCSGQSHAWC*RYSIRA
Trigger: AGCTCTGATGGAATACCGTCAGCACCACGCATGACT...CTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCACCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000534650.5
CDS-3UTR TCA 90 bp GGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGTGTCTGGACTACGGCCGTACTTaGGGCAGAACTCGCACAGGT +
Preference number: 4 (lower is better)
Translates to: GLSAPVLLPSWHCSGQCLDYGRT*GRTRTG
Trigger: ACCTGTGCGAGTTCTGCCTCAAGTACGGCCGTAGTC...CAGACACTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000534650.5
CDS-3UTR TCA 90 bp GCGGGGTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCATGTCCTCTGACAGTGTaGGGATGTACTGGCCCTTGT +
Preference number: 4 (lower is better)
Translates to: AGWAISPSPAAVLALQWACPLTV*GCTGPC
Trigger: ACAAGGGCCAGTACATCCTCACACTGTCAGAGGACA...TGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCACCCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000533596.1
ENST00000534650.5
CDS-3UTR TCA 90 bp GCGGGGTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCATCCAGTCCTTGGGAGTaGAGTGCAGACACTTGGAGT +
Preference number: 4 (lower is better)
Translates to: AGWAISPSPAAVLALQWASSPWE*SADTWS
Trigger: ACTCCAAGTGTCTGCACTTCACTCCCAAGGACTGGA...TGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCACCCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000533596.1
ENST00000534650.5
CDS-3UTR TCA 90 bp CGGGGTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGTCCAGTCCTTGGGAGTaGAGTGCAGACACTTGGAGT +
Preference number: 4 (lower is better)
Translates to: RGGLSAPVLLPSWHCSGQSSPWE*SADTWS
Trigger: ACTCCAAGTGTCTGCACTTCACTCCCAAGGACTGGA...CTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCACCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000533596.1
ENST00000534650.5
CDS-3UTR TCA 90 bp CCAGCCCTCTGTACAGAGCTCCCCCATCCGGATCCCTTCTCACTGTACACAGCTACTGAGTCCGTCACGTaGCGCCCACCGGGTGCGAAG +
Preference number: 4 (lower is better)
Translates to: PALCTELPHPDPFSLYTATESVT*RPPGAK
Trigger: CTTCGCACCCGGTGGGCGTCACGTGACGGACTCAGT...AGCTGTGTACAGTGAGAAGGGATCCGGATGGGGGAGCTCTGTACAGAGGGCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377046.7
CDS-3UTR GCA 90 bp GTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGTGTCCCAGGCTGCCAGTCATaGGTGGTGCTGACGGTATTC +
Preference number: 4 (lower is better)
Translates to: VGYQPQSCCRLGTAVGSVPGCQS*VVLTVF
Trigger: GAATACCGTCAGCACCACGCATGACTGGCAGCCTGG...GACACTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000534650.5
CDS-3UTR GCA 90 bp GGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGTGTCTGCCAGGCTGCCAGTCATaGGTGGTGCTGACGGTATTC +
Preference number: 4 (lower is better)
Translates to: GLSAPVLLPSWHCSGQCLPGCQS*VVLTVF
Trigger: GAATACCGTCAGCACCACGCATGACTGGCAGCCTGG...CAGACACTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000534650.5
CDS-3UTR GCA 90 bp GGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGTGTCTGGATCAGACACCAGGCTaGCAGTCATGCGTGGTGCTG +
Preference number: 4 (lower is better)
Translates to: GLSAPVLLPSWHCSGQCLDQTPG*QSCVVL
Trigger: CAGCACCACGCATGACTGGCAGCCTGGTGTCTGATC...CAGACACTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000534650.5
CDS-3UTR GCA 90 bp GTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGTGTCGATCAGACACCAGGCTaGCAGTCATGCGTGGTGCTG +
Preference number: 4 (lower is better)
Translates to: VGYQPQSCCRLGTAVGSVDQTPG*QSCVVL
Trigger: CAGCACCACGCATGACTGGCAGCCTGGTGTCTGATC...GACACTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000534650.5
CDS-3UTR GCA 90 bp CGGGGTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGGCCGGCCCAGCTCAATaGACTCAATGTTCTTCATCC +
Preference number: 4 (lower is better)
Translates to: RGGLSAPVLLPSWHCSGQAGPAQ*TQCSSS
Trigger: GGATGAAGAACATTGAGTGCATTGAGCTGGGCCGGC...CTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCACCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000534650.5
CDS-3UTR GCA 90 bp CCAGCCCTCTGTACAGAGCTCCCCCATCCGGATCCCTTCTCACTGTACACAGCTCACGGCTTGAGGCGGTaGCGGCCCAGCTCAATGCAC +
Preference number: 4 (lower is better)
Translates to: PALCTELPHPDPFSLYTAHGLRR*RPSSMH
Trigger: GTGCATTGAGCTGGGCCGGCACCGCCTCAAGCCGTG...AGCTGTGTACAGTGAGAAGGGATCCGGATGGGGGAGCTCTGTACAGAGGGCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000534650.5
CDS-3UTR GCA 90 bp TCTGAGCCCGGAGCTCGCCTTGGTGCTGGGCACCAGTGGGCCCCTGCCAGGCCTTGCGGTAAATCTCATTaGCTGGAGGATGTCGTAGGT +
Preference number: 4 (lower is better)
Translates to: SEPGARLGAGHQWAPARPCGKSH*LEDVVG
Trigger: ACCTACGACATCCTCCAGGCAATGAGATTTACCGCA...AGGCCTGGCAGGGGCCCACTGGTGCCCAGCACCAAGGCGAGCTCCGGGCTCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000534650.5
CDS-3UTR GCA 90 bp GTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGTGTCTATCAGCCCCAGTCCTaGTGCCGTCTTGGCACTGCA +
Preference number: 4 (lower is better)
Translates to: VGYQPQSCCRLGTAVGSVYQPQS*CRLGTA
Trigger: TGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATA...GACACTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000533596.1
ENST00000534650.5
CDS-3UTR GCA 90 bp GCGGGGTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCACCATCTCCCTTAGAGTaGTTTGTGGGAGCTGCAGTG +
Preference number: 4 (lower is better)
Translates to: AGWAISPSPAAVLALQWAPSPLE*FVGAAV
Trigger: CACTGCAGCTCCCACAAAGCACTCTAAGGGAGATGG...TGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCACCCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000533596.1
ENST00000534650.5
CDS-3UTR GCA 90 bp CGGGGTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGCCATCTCCCTTAGAGTaGTTTGTGGGAGCTGCAGTG +
Preference number: 4 (lower is better)
Translates to: RGGLSAPVLLPSWHCSGQPSPLE*FVGAAV
Trigger: CACTGCAGCTCCCACAAAGCACTCTAAGGGAGATGG...CTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCACCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000533596.1
ENST00000534650.5
CDS-3UTR GCA 90 bp CCAGCCCTCTGTACAGAGCTCCCCCATCCGGATCCCTTCTCACTGTACACAGCTGCTCCCTCTGGTCCCTaGTTCAGAGGAGGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: PALCTELPHPDPFSLYTAAPSGP*FRGGLG
Trigger: GCCCAGGCCTCCTCTGAAGCAGGGACCAGAGGGAGC...AGCTGTGTACAGTGAGAAGGGATCCGGATGGGGGAGCTCTGTACAGAGGGCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000533596.1
ENST00000534650.5
CDS-3UTR GCA 90 bp CGGGGTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGGAAGCCAGAAATTTTTaGAGCCAGCACCCACCCCAC +
Preference number: 4 (lower is better)
Translates to: RGGLSAPVLLPSWHCSGQEARNF*SQHPPH
Trigger: GTGGGGTGGGTGCTGGCTGCAAAAATTTCTGGCTTC...CTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCACCCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000533596.1
ENST00000534650.5
CDS-3UTR GCA 90 bp GCGGGGTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGAAGCCAGAAATTTTTaGAGCCAGCACCCACCCCAC +
Preference number: 4 (lower is better)
Translates to: AGWAISPSPAAVLALQWAEARNF*SQHPPH
Trigger: GTGGGGTGGGTGCTGGCTGCAAAAATTTCTGGCTTC...TGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCACCCCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000533596.1
ENST00000534650.5
CDS-3UTR CCA 90 bp GGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGTGTCTGCCATCAGAGCTGTCCTaGGAGTCCTCATCAGTGCCC +
Preference number: 4 (lower is better)
Translates to: GLSAPVLLPSWHCSGQCLPSELS*ESSSVP
Trigger: GGGCACTGATGAGGACTCCCAGGACAGCTCTGATGG...CAGACACTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000534650.5
CDS-3UTR CCA 90 bp GTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGTGTCCCATCAGAGCTGTCCTaGGAGTCCTCATCAGTGCCC +
Preference number: 4 (lower is better)
Translates to: VGYQPQSCCRLGTAVGSVPSELS*ESSSVP
Trigger: GGGCACTGATGAGGACTCCCAGGACAGCTCTGATGG...GACACTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000534650.5
CDS-3UTR CCA 90 bp CGGGGTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGTGTGGTGAGTTCCTGTaGGTACGGGGAGAAGTACCA +
Preference number: 4 (lower is better)
Translates to: RGGLSAPVLLPSWHCSGQCGEFL*VRGEVP
Trigger: TGGTACTTCTCCCCGTACCCACAGGAACTCACCACA...CTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCACCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000534650.5
CDS-3UTR CCA 90 bp GCGGGGTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCATGTGGTGAGTTCCTGTaGGTACGGGGAGAAGTACCA +
Preference number: 4 (lower is better)
Translates to: AGWAISPSPAAVLALQWACGEFL*VRGEVP
Trigger: TGGTACTTCTCCCCGTACCCACAGGAACTCACCACA...TGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCACCCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000534650.5
CDS-3UTR CCA 90 bp GCGGGGTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCATCAGGATCTCCAGGATaGTCTGGGACCAGTAGCTTC +
Preference number: 4 (lower is better)
Translates to: AGWAISPSPAAVLALQWASGSPG*SGTSSF
Trigger: GAAGCTACTGGTCCCAGACCATCCTGGAGATCCTGA...TGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCACCCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000534650.5
CDS-3UTR CCA 90 bp CGGGGTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGTCAGGATCTCCAGGATaGTCTGGGACCAGTAGCTTC +
Preference number: 4 (lower is better)
Translates to: RGGLSAPVLLPSWHCSGQSGSPG*SGTSSF
Trigger: GAAGCTACTGGTCCCAGACCATCCTGGAGATCCTGA...CTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCACCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000534650.5
CDS-3UTR CCA 90 bp GTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGTGTCAGCATGGCCCGCTCATaGCCATCCACGATGTCCTCT +
Preference number: 4 (lower is better)
Translates to: VGYQPQSCCRLGTAVGSVSMARS*PSTMSS
Trigger: AGAGGACATCGTGGATGGCCATGAGCGGGCCATGCT...GACACTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000533596.1
ENST00000534650.5
CDS-3UTR CCA 90 bp GTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGTGTCGCAGTGGGCAGTGTCTaGTCACCACTTCCCCCTCTT +
Preference number: 4 (lower is better)
Translates to: VGYQPQSCCRLGTAVGSVAVGSV*SPLPPL
Trigger: AAGAGGGGGAAGTGGTGACCAGACACTGCCCACTGC...GACACTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000533596.1
ENST00000534650.5
CDS-3UTR CCA 90 bp GTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGTGTCGTCTTGGCACTGCAGTaGGCAGTGTCTGGTCACCAC +
Preference number: 4 (lower is better)
Translates to: VGYQPQSCCRLGTAVGSVVLALQ*AVSGHH
Trigger: GTGGTGACCAGACACTGCCCACTGCAGTGCCAAGAC...GACACTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000533596.1
ENST00000534650.5
CDS-3UTR CCA 90 bp GGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGTGTCTGAGGCCGAGCCCTAGGTaGAAACCCCATAACGTGCAC +
Preference number: 4 (lower is better)
Translates to: GLSAPVLLPSWHCSGQCLRPSPR*KPHNVH
Trigger: GTGCACGTTATGGGGTTTCCACCTAGGGCTCGGCCT...CAGACACTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352980.8
ENST00000377046.7
CDS-3UTR CCA 90 bp GTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGTGTCTTTCACCTCTCTCTCTaGAGAGCCAGGACGGGACCC +
Preference number: 4 (lower is better)
Translates to: VGYQPQSCCRLGTAVGSVFHLSL*RARTGP
Trigger: GGGTCCCGTCCTGGCTCTCCAGAGAGAGAGGTGAAA...GACACTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352980.8
ENST00000530446.5
ENST00000534650.5
CDS-3UTR TCA 90 bp GGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGTGTCTGAAAGCTTCCGGCCACTaGTGTCCTTCACGCTCAGGA +
Preference number: 4 (lower is better)
Translates to: GLSAPVLLPSWHCSGQCLKASGH*CPSRSG
Trigger: TCCTGAGCGTGAAGGACATCAGTGGCCGGAAGCTTT...CAGACACTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000534650.5
CDS-3UTR TCA 90 bp GGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGTGTCTGTGTTCTTCATCCGGGTaGCGATGTCGTCGTGGCTTC +
Preference number: 4 (lower is better)
Translates to: GLSAPVLLPSWHCSGQCLCSSSG*RCRRGF
Trigger: GAAGCCACGACGACATCGTCACCCGGATGAAGAACA...CAGACACTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000534650.5
CDS-3UTR TCA 90 bp CGGGGTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGATCCACGATGTCCTCTaGCAGTGTGAGGATGTACTG +
Preference number: 4 (lower is better)
Translates to: RGGLSAPVLLPSWHCSGQIHDVL*QCEDVL
Trigger: CAGTACATCCTCACACTGTCAGAGGACATCGTGGAT...CTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCACCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000533596.1
ENST00000534650.5
CDS-3UTR TCA 90 bp CCAGCCCTCTGTACAGAGCTCCCCCATCCGGATCCCTTCTCACTGTACACAGCTGGGCCTGTGGCCAGCTaGCCTTGGAGTTGGTCTGAG +
Preference number: 4 (lower is better)
Translates to: PALCTELPHPDPFSLYTAGPVAS*PWSWSE
Trigger: CTCAGACCAACTCCAAGGTCAGCTGGCCACAGGCCC...AGCTGTGTACAGTGAGAAGGGATCCGGATGGGGGAGCTCTGTACAGAGGGCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000533596.1
ENST00000534650.5
CDS-3UTR GCA 90 bp GTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGTGTCAGGTCCAGCCGCTCATaGGTCACCCATTCATCCAGA +
Preference number: 4 (lower is better)
Translates to: VGYQPQSCCRLGTAVGSVRSSRS*VTHSSR
Trigger: TCTGGATGAATGGGTGACGCATGAGCGGCTGGACCT...GACACTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000534650.5
CDS-3UTR GCA 90 bp CGGGGTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGAGGAGATGGTGCCCTTaGGGTAAATCTCATTGCCTG +
Preference number: 4 (lower is better)
Translates to: RGGLSAPVLLPSWHCSGQRRWCP*GKSHCL
Trigger: CAGGCAATGAGATTTACCGCAAGGGCACCATCTCCT...CTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCACCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000534650.5
CDS-3UTR GCA 90 bp TCTGAGCCCGGAGCTCGCCTTGGTGCTGGGCACCAGTGGGCCCCTGCCAGGCCTCAAAGAAGGAGATGGTaGCCTTGCGGTAAATCTCAT +
Preference number: 4 (lower is better)
Translates to: SEPGARLGAGHQWAPARPQRRRW*PCGKSH
Trigger: ATGAGATTTACCGCAAGGGCACCATCTCCTTCTTTG...AGGCCTGGCAGGGGCCCACTGGTGCCCAGCACCAAGGCGAGCTCCGGGCTCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000534650.5
CDS-3UTR GCA 90 bp GCGGGGTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGAGGCAGGGTTAGGATaGAGGCCACATTGTAGTCTT +
Preference number: 4 (lower is better)
Translates to: AGWAISPSPAAVLALQWAEAGLG*RPHCSL
Trigger: AAGACTACAATGTGGCCTGCATCCTAACCCTGCCTC...TGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCACCCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000534650.5
CDS-3UTR GCA 90 bp CGGGGTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGGAGGCAGGGTTAGGATaGAGGCCACATTGTAGTCTT +
Preference number: 4 (lower is better)
Translates to: RGGLSAPVLLPSWHCSGQEAGLG*RPHCSL
Trigger: AAGACTACAATGTGGCCTGCATCCTAACCCTGCCTC...CTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCACCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000534650.5
CDS-3UTR GCA 90 bp TCTGAGCCCGGAGCTCGCCTTGGTGCTGGGCACCAGTGGGCCCCTGCCAGGCCTATGAGATTGAGGTACTaGAGAGTGGAGATGACATCC +
Preference number: 4 (lower is better)
Translates to: SEPGARLGAGHQWAPARPMRLRY*RVEMTS
Trigger: GGATGTCATCTCCACTCTGCAGTACCTCAATCTCAT...AGGCCTGGCAGGGGCCCACTGGTGCCCAGCACCAAGGCGAGCTCCGGGCTCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000533596.1
ENST00000534650.5
CDS-3UTR CCA 90 bp TCTGAGCCCGGAGCTCGCCTTGGTGCTGGGCACCAGTGGGCCCCTGCCAGGCCTTCTTTCTTGGGGAACTaGATCTTCTTTAGGTCCAGC +
Preference number: 4 (lower is better)
Translates to: SEPGARLGAGHQWAPARPSFLGN*IFFRSS
Trigger: GCTGGACCTAAAGAAGATCCAGTTCCCCAAGAAAGA...AGGCCTGGCAGGGGCCCACTGGTGCCCAGCACCAAGGCGAGCTCCGGGCTCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000534650.5
CDS-3UTR CCA 90 bp CCAGCCCTCTGTACAGAGCTCCCCCATCCGGATCCCTTCTCACTGTACACAGCTTCGTTGAGCGGTGGTTaGGCTGCAGGCAGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: PALCTELPHPDPFSLYTASLSGG*AAGRSW
Trigger: CCAGCTCCTGCCTGCAGCCCAACCACCGCTCAACGA...AGCTGTGTACAGTGAGAAGGGATCCGGATGGGGGAGCTCTGTACAGAGGGCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341318.9
ENST00000377046.7
CDS-3UTR CCA 90 bp GGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGTGTCTGGTGACGATGTCGTCGTaGCTTCGATCAGACACCAGG +
Preference number: 4 (lower is better)
Translates to: GLSAPVLLPSWHCSGQCLVTMSS*LRSDTR
Trigger: CCTGGTGTCTGATCGAAGCCACGACGACATCGTCAC...CAGACACTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000534650.5
CDS-3UTR CCA 90 bp GTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGTGTCGTGACGATGTCGTCGTaGCTTCGATCAGACACCAGG +
Preference number: 4 (lower is better)
Translates to: VGYQPQSCCRLGTAVGSVVTMSS*LRSDTR
Trigger: CCTGGTGTCTGATCGAAGCCACGACGACATCGTCAC...GACACTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000534650.5
CDS-3UTR CCA 90 bp TCTGAGCCCGGAGCTCGCCTTGGTGCTGGGCACCAGTGGGCCCCTGCCAGGCCTTCTCAAAGAAGGAGATaGTGCCCTTGCGGTAAATCT +
Preference number: 4 (lower is better)
Translates to: SEPGARLGAGHQWAPARPSQRRR*CPCGKS
Trigger: AGATTTACCGCAAGGGCACCATCTCCTTCTTTGAGA...AGGCCTGGCAGGGGCCCACTGGTGCCCAGCACCAAGGCGAGCTCCGGGCTCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000534650.5
CDS-3UTR CCA 90 bp GGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGTGTCTGATTGATGGTGATCTGTaGCCTCTCCCCGCTCTCCGA +
Preference number: 4 (lower is better)
Translates to: GLSAPVLLPSWHCSGQCLIDGDL*PLPALR
Trigger: TCGGAGAGCGGGGAGAGGCCACAGATCACCATCAAT...CAGACACTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000534650.5
CDS-3UTR CCA 90 bp GTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGTGTCATTGATGGTGATCTGTaGCCTCTCCCCGCTCTCCGA +
Preference number: 4 (lower is better)
Translates to: VGYQPQSCCRLGTAVGSVIDGDL*PLPALR
Trigger: TCGGAGAGCGGGGAGAGGCCACAGATCACCATCAAT...GACACTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000534650.5
CDS-3UTR CCA 90 bp CCAGCCCTCTGTACAGAGCTCCCCCATCCGGATCCCTTCTCACTGTACACAGCTTTGTGGGAGCTGCAGTaGGGGCGGGGTGGGCTATCA +
Preference number: 4 (lower is better)
Translates to: PALCTELPHPDPFSLYTALWELQ*GRGGLS
Trigger: TGATAGCCCACCCCGCCCCCACTGCAGCTCCCACAA...AGCTGTGTACAGTGAGAAGGGATCCGGATGGGGGAGCTCTGTACAGAGGGCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000533596.1
ENST00000534650.5
CDS-3UTR TCA 90 bp TCTGAGCCCGGAGCTCGCCTTGGTGCTGGGCACCAGTGGGCCCCTGCCAGGCCTCATCCAGACGTTTGTTaGAGTCAATGTAATGGACGT +
Preference number: 4 (lower is better)
Translates to: SEPGARLGAGHQWAPARPHPDVC*SQCNGR
Trigger: ACGTCCATTACATTGACTTCAACAAACGTCTGGATG...AGGCCTGGCAGGGGCCCACTGGTGCCCAGCACCAAGGCGAGCTCCGGGCTCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000534650.5
CDS-3UTR TCA 90 bp GTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGTGTCAGTCATGCGTGGTGCTaGCGGTATTCCATCAGAGCT +
Preference number: 4 (lower is better)
Translates to: VGYQPQSCCRLGTAVGSVSHAWC*RYSIRA
Trigger: AGCTCTGATGGAATACCGTCAGCACCACGCATGACT...GACACTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000534650.5
CDS-3UTR TCA 90 bp CCAGCCCTCTGTACAGAGCTCCCCCATCCGGATCCCTTCTCACTGTACACAGCTGGACAGGCAATGTGGTaGGTTCCTGTGGGTACGGGG +
Preference number: 4 (lower is better)
Translates to: PALCTELPHPDPFSLYTAGQAMW*VPVGTG
Trigger: CCCCGTACCCACAGGAACTCACCACATTGCCTGTCC...AGCTGTGTACAGTGAGAAGGGATCCGGATGGGGGAGCTCTGTACAGAGGGCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000534650.5
CDS-3UTR TCA 90 bp GGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGTGTCTGTGTCCTCTGACAGTGTaGGGATGTACTGGCCCTTGT +
Preference number: 4 (lower is better)
Translates to: GLSAPVLLPSWHCSGQCLCPLTV*GCTGPC
Trigger: ACAAGGGCCAGTACATCCTCACACTGTCAGAGGACA...CAGACACTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000533596.1
ENST00000534650.5
CDS-3UTR TCA 90 bp GTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGTGTCTGTCCTCTGACAGTGTaGGGATGTACTGGCCCTTGT +
Preference number: 4 (lower is better)
Translates to: VGYQPQSCCRLGTAVGSVCPLTV*GCTGPC
Trigger: ACAAGGGCCAGTACATCCTCACACTGTCAGAGGACA...GACACTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000533596.1
ENST00000534650.5
CDS-3UTR TCA 90 bp GGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGTGTCTGTCCAGTCCTTGGGAGTaGAGTGCAGACACTTGGAGT +
Preference number: 4 (lower is better)
Translates to: GLSAPVLLPSWHCSGQCLSSPWE*SADTWS
Trigger: ACTCCAAGTGTCTGCACTTCACTCCCAAGGACTGGA...CAGACACTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000533596.1
ENST00000534650.5
CDS-3UTR TCA 90 bp GTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGTGTCTCCAGTCCTTGGGAGTaGAGTGCAGACACTTGGAGT +
Preference number: 4 (lower is better)
Translates to: VGYQPQSCCRLGTAVGSVSSPWE*SADTWS
Trigger: ACTCCAAGTGTCTGCACTTCACTCCCAAGGACTGGA...GACACTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000533596.1
ENST00000534650.5
CDS-3UTR GCA 90 bp GTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGTGTCGCCGGCCCAGCTCAATaGACTCAATGTTCTTCATCC +
Preference number: 4 (lower is better)
Translates to: VGYQPQSCCRLGTAVGSVAGPAQ*TQCSSS
Trigger: GGATGAAGAACATTGAGTGCATTGAGCTGGGCCGGC...GACACTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000534650.5
CDS-3UTR GCA 90 bp CGGGGTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGTGCGGTAAATCTCATTaGCTGGAGGATGTCGTAGGT +
Preference number: 4 (lower is better)
Translates to: RGGLSAPVLLPSWHCSGQCGKSH*LEDVVG
Trigger: ACCTACGACATCCTCCAGGCAATGAGATTTACCGCA...CTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCACCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000534650.5
CDS-3UTR GCA 90 bp GCGGGGTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCATGCGGTAAATCTCATTaGCTGGAGGATGTCGTAGGT +
Preference number: 4 (lower is better)
Translates to: AGWAISPSPAAVLALQWACGKSH*LEDVVG
Trigger: ACCTACGACATCCTCCAGGCAATGAGATTTACCGCA...TGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCACCCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000534650.5
CDS-3UTR GCA 90 bp CCAGCCCTCTGTACAGAGCTCCCCCATCCGGATCCCTTCTCACTGTACACAGCTCTGCCGTCTTGGCACTaGAGTGGGCAGTGTCTGGTC +
Preference number: 4 (lower is better)
Translates to: PALCTELPHPDPFSLYTALPSWH*SGQCLV
Trigger: GACCAGACACTGCCCACTGCAGTGCCAAGACGGCAG...AGCTGTGTACAGTGAGAAGGGATCCGGATGGGGGAGCTCTGTACAGAGGGCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000533596.1
ENST00000534650.5
CDS-3UTR GCA 90 bp GTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGTGTCCCATCTCCCTTAGAGTaGTTTGTGGGAGCTGCAGTG +
Preference number: 4 (lower is better)
Translates to: VGYQPQSCCRLGTAVGSVPSPLE*FVGAAV
Trigger: CACTGCAGCTCCCACAAAGCACTCTAAGGGAGATGG...GACACTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000533596.1
ENST00000534650.5
CDS-3UTR GCA 90 bp GGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGTGTCTGCCATCTCCCTTAGAGTaGTTTGTGGGAGCTGCAGTG +
Preference number: 4 (lower is better)
Translates to: GLSAPVLLPSWHCSGQCLPSPLE*FVGAAV
Trigger: CACTGCAGCTCCCACAAAGCACTCTAAGGGAGATGG...CAGACACTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000533596.1
ENST00000534650.5
CDS-3UTR GCA 90 bp CCAGCCCTCTGTACAGAGCTCCCCCATCCGGATCCCTTCTCACTGTACACAGCTCTCACTGTACACAGCTaGCTGGCTCCCTCTGGTCCC +
Preference number: 4 (lower is better)
Translates to: PALCTELPHPDPFSLYTALTVHS*LAPSGP
Trigger: GGGACCAGAGGGAGCCAGGCAGCTGTGTACAGTGAG...AGCTGTGTACAGTGAGAAGGGATCCGGATGGGGGAGCTCTGTACAGAGGGCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000533596.1
ENST00000534650.5
CDS-3UTR GCA 90 bp GTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGTGTCGAAGCCAGAAATTTTTaGAGCCAGCACCCACCCCAC +
Preference number: 4 (lower is better)
Translates to: VGYQPQSCCRLGTAVGSVEARNF*SQHPPH
Trigger: GTGGGGTGGGTGCTGGCTGCAAAAATTTCTGGCTTC...GACACTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000533596.1
ENST00000534650.5
CDS-3UTR CCA 90 bp GGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGTGTCTGTGTGGTGAGTTCCTGTaGGTACGGGGAGAAGTACCA +
Preference number: 4 (lower is better)
Translates to: GLSAPVLLPSWHCSGQCLCGEFL*VRGEVP
Trigger: TGGTACTTCTCCCCGTACCCACAGGAACTCACCACA...CAGACACTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000534650.5
CDS-3UTR CCA 90 bp TCTGAGCCCGGAGCTCGCCTTGGTGCTGGGCACCAGTGGGCCCCTGCCAGGCCTTTGATTCTTTCTCCTTaGAGAAGTAGCCCACGATGT +
Preference number: 4 (lower is better)
Translates to: SEPGARLGAGHQWAPARPLILSP*RSSPRC
Trigger: ACATCGTGGGCTACTTCTCCAAGGAGAAAGAATCAA...AGGCCTGGCAGGGGCCCACTGGTGCCCAGCACCAAGGCGAGCTCCGGGCTCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000534650.5
CDS-3UTR TCA 90 bp CCAGCCCTCTGTACAGAGCTCCCCCATCCGGATCCCTTCTCACTGTACACAGCTGACTACGGCCGTACTTaGGGCAGAACTCGCACAGGT +
Preference number: 4 (lower is better)
Translates to: PALCTELPHPDPFSLYTADYGRT*GRTRTG
Trigger: ACCTGTGCGAGTTCTGCCTCAAGTACGGCCGTAGTC...AGCTGTGTACAGTGAGAAGGGATCCGGATGGGGGAGCTCTGTACAGAGGGCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000534650.5
CDS-3UTR TCA 90 bp GCGGGGTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAAGTCATACTCTGTCATaGCGTAGAAGAGGAAAGGGT +
Preference number: 4 (lower is better)
Translates to: AGWAISPSPAAVLALQWASHTLS*RRRGKG
Trigger: ACCCTTTCCTCTTCTACGTCATGACAGAGTATGACT...TGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCACCCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000534650.5
CDS-3UTR TCA 90 bp CGGGGTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGAGTCATACTCTGTCATaGCGTAGAAGAGGAAAGGGT +
Preference number: 4 (lower is better)
Translates to: RGGLSAPVLLPSWHCSGQSHTLS*RRRGKG
Trigger: ACCCTTTCCTCTTCTACGTCATGACAGAGTATGACT...CTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCACCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000534650.5
CDS-3UTR GCA 90 bp CGGGGTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGGGGAGTCCTCATCAGTaGCCAAACAATTCGATTTTC +
Preference number: 4 (lower is better)
Translates to: RGGLSAPVLLPSWHCSGQGSPHQ*PNNSIF
Trigger: GAAAATCGAATTGTTTGGGCACTGATGAGGACTCCC...CTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCACCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000534650.5
CDS-3UTR GCA 90 bp GTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGTGTCAGGAGATGGTGCCCTTaGGGTAAATCTCATTGCCTG +
Preference number: 4 (lower is better)
Translates to: VGYQPQSCCRLGTAVGSVRRWCP*GKSHCL
Trigger: CAGGCAATGAGATTTACCGCAAGGGCACCATCTCCT...GACACTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000534650.5
CDS-3UTR GCA 90 bp GCGGGGTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCACAAAGAAGGAGATGGTaGCCTTGCGGTAAATCTCAT +
Preference number: 4 (lower is better)
Translates to: AGWAISPSPAAVLALQWAQRRRW*PCGKSH
Trigger: ATGAGATTTACCGCAAGGGCACCATCTCCTTCTTTG...TGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCACCCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000534650.5
CDS-3UTR GCA 90 bp CGGGGTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGCAAAGAAGGAGATGGTaGCCTTGCGGTAAATCTCAT +
Preference number: 4 (lower is better)
Translates to: RGGLSAPVLLPSWHCSGQQRRRW*PCGKSH
Trigger: ATGAGATTTACCGCAAGGGCACCATCTCCTTCTTTG...CTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCACCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000534650.5
CDS-3UTR GCA 90 bp GGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGTGTCTGGAGGCAGGGTTAGGATaGAGGCCACATTGTAGTCTT +
Preference number: 4 (lower is better)
Translates to: GLSAPVLLPSWHCSGQCLEAGLG*RPHCSL
Trigger: AAGACTACAATGTGGCCTGCATCCTAACCCTGCCTC...CAGACACTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000534650.5
CDS-3UTR GCA 90 bp GTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGTGTCGAGGCAGGGTTAGGATaGAGGCCACATTGTAGTCTT +
Preference number: 4 (lower is better)
Translates to: VGYQPQSCCRLGTAVGSVEAGLG*RPHCSL
Trigger: AAGACTACAATGTGGCCTGCATCCTAACCCTGCCTC...GACACTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000534650.5
CDS-3UTR GCA 90 bp CGGGGTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGATGAGATTGAGGTACTaGAGAGTGGAGATGACATCC +
Preference number: 4 (lower is better)
Translates to: RGGLSAPVLLPSWHCSGQMRLRY*RVEMTS
Trigger: GGATGTCATCTCCACTCTGCAGTACCTCAATCTCAT...CTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCACCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000533596.1
ENST00000534650.5
CDS-3UTR GCA 90 bp GCGGGGTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAATGAGATTGAGGTACTaGAGAGTGGAGATGACATCC +
Preference number: 4 (lower is better)
Translates to: AGWAISPSPAAVLALQWAMRLRY*RVEMTS
Trigger: GGATGTCATCTCCACTCTGCAGTACCTCAATCTCAT...TGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCACCCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000533596.1
ENST00000534650.5
CDS-3UTR CCA 90 bp GCGGGGTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCATCTTTCTTGGGGAACTaGATCTTCTTTAGGTCCAGC +
Preference number: 4 (lower is better)
Translates to: AGWAISPSPAAVLALQWASFLGN*IFFRSS
Trigger: GCTGGACCTAAAGAAGATCCAGTTCCCCAAGAAAGA...TGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCACCCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000534650.5
CDS-3UTR CCA 90 bp CCAGCCCTCTGTACAGAGCTCCCCCATCCGGATCCCTTCTCACTGTACACAGCTAGCATGGCCCGCTCATaGCCATCCACGATGTCCTCT +
Preference number: 4 (lower is better)
Translates to: PALCTELPHPDPFSLYTASMARS*PSTMSS
Trigger: AGAGGACATCGTGGATGGCCATGAGCGGGCCATGCT...AGCTGTGTACAGTGAGAAGGGATCCGGATGGGGGAGCTCTGTACAGAGGGCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000533596.1
ENST00000534650.5
CDS-3UTR CCA 90 bp CCAGCCCTCTGTACAGAGCTCCCCCATCCGGATCCCTTCTCACTGTACACAGCTGTCTTGGCACTGCAGTaGGCAGTGTCTGGTCACCAC +
Preference number: 4 (lower is better)
Translates to: PALCTELPHPDPFSLYTAVLALQ*AVSGHH
Trigger: GTGGTGACCAGACACTGCCCACTGCAGTGCCAAGAC...AGCTGTGTACAGTGAGAAGGGATCCGGATGGGGGAGCTCTGTACAGAGGGCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000533596.1
ENST00000534650.5
CDS-3UTR CCA 90 bp CCAGCCCTCTGTACAGAGCTCCCCCATCCGGATCCCTTCTCACTGTACACAGCTTTTCACCTCTCTCTCTaGAGAGCCAGGACGGGACCC +
Preference number: 4 (lower is better)
Translates to: PALCTELPHPDPFSLYTAFHLSL*RARTGP
Trigger: GGGTCCCGTCCTGGCTCTCCAGAGAGAGAGGTGAAA...AGCTGTGTACAGTGAGAAGGGATCCGGATGGGGGAGCTCTGTACAGAGGGCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000352980.8
ENST00000534650.5
CDS-3UTR TCA 90 bp CCAGCCCTCTGTACAGAGCTCCCCCATCCGGATCCCTTCTCACTGTACACAGCTAAAGCTTCCGGCCACTaGTGTCCTTCACGCTCAGGA +
Preference number: 4 (lower is better)
Translates to: PALCTELPHPDPFSLYTAKASGH*CPSRSG
Trigger: TCCTGAGCGTGAAGGACATCAGTGGCCGGAAGCTTT...AGCTGTGTACAGTGAGAAGGGATCCGGATGGGGGAGCTCTGTACAGAGGGCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000534650.5
CDS-3UTR TCA 90 bp GCGGGGTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCACATCCAGACGTTTGTTaGAGTCAATGTAATGGACGT +
Preference number: 4 (lower is better)
Translates to: AGWAISPSPAAVLALQWAHPDVC*SQCNGR
Trigger: ACGTCCATTACATTGACTTCAACAAACGTCTGGATG...TGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCACCCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000534650.5
CDS-3UTR GCA 90 bp CCAGCCCTCTGTACAGAGCTCCCCCATCCGGATCCCTTCTCACTGTACACAGCTAGGTCCAGCCGCTCATaGGTCACCCATTCATCCAGA +
Preference number: 4 (lower is better)
Translates to: PALCTELPHPDPFSLYTARSSRS*VTHSSR
Trigger: TCTGGATGAATGGGTGACGCATGAGCGGCTGGACCT...AGCTGTGTACAGTGAGAAGGGATCCGGATGGGGGAGCTCTGTACAGAGGGCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000534650.5
CDS-3UTR GCA 90 bp GTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGTGTCTGCGGTAAATCTCATTaGCTGGAGGATGTCGTAGGT +
Preference number: 4 (lower is better)
Translates to: VGYQPQSCCRLGTAVGSVCGKSH*LEDVVG
Trigger: ACCTACGACATCCTCCAGGCAATGAGATTTACCGCA...GACACTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000534650.5
CDS-3UTR GCA 90 bp CCAGCCCTCTGTACAGAGCTCCCCCATCCGGATCCCTTCTCACTGTACACAGCTGGAAACCCCATAACGTaGACAGCCAGTGGCGGTCTA +
Preference number: 4 (lower is better)
Translates to: PALCTELPHPDPFSLYTAGNPIT*TASGGL
Trigger: TAGACCGCCACTGGCTGTGCACGTTATGGGGTTTCC...AGCTGTGTACAGTGAGAAGGGATCCGGATGGGGGAGCTCTGTACAGAGGGCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000352980.8
ENST00000377046.7
CDS-3UTR CCA 90 bp CGGGGTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGTTGATTCTTTCTCCTTaGAGAAGTAGCCCACGATGT +
Preference number: 4 (lower is better)
Translates to: RGGLSAPVLLPSWHCSGQLILSP*RSSPRC
Trigger: ACATCGTGGGCTACTTCTCCAAGGAGAAAGAATCAA...CTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCACCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000534650.5
CDS-3UTR CCA 90 bp CCAGCCCTCTGTACAGAGCTCCCCCATCCGGATCCCTTCTCACTGTACACAGCTATTGATGGTGATCTGTaGCCTCTCCCCGCTCTCCGA +
Preference number: 4 (lower is better)
Translates to: PALCTELPHPDPFSLYTAIDGDL*PLPALR
Trigger: TCGGAGAGCGGGGAGAGGCCACAGATCACCATCAAT...AGCTGTGTACAGTGAGAAGGGATCCGGATGGGGGAGCTCTGTACAGAGGGCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000534650.5
CDS-3UTR TCA 90 bp CCAGCCCTCTGTACAGAGCTCCCCCATCCGGATCCCTTCTCACTGTACACAGCTAGTCATGCGTGGTGCTaGCGGTATTCCATCAGAGCT +
Preference number: 4 (lower is better)
Translates to: PALCTELPHPDPFSLYTASHAWC*RYSIRA
Trigger: AGCTCTGATGGAATACCGTCAGCACCACGCATGACT...AGCTGTGTACAGTGAGAAGGGATCCGGATGGGGGAGCTCTGTACAGAGGGCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000534650.5
CDS-3UTR TCA 90 bp CCAGCCCTCTGTACAGAGCTCCCCCATCCGGATCCCTTCTCACTGTACACAGCTTGTCCTCTGACAGTGTaGGGATGTACTGGCCCTTGT +
Preference number: 4 (lower is better)
Translates to: PALCTELPHPDPFSLYTACPLTV*GCTGPC
Trigger: ACAAGGGCCAGTACATCCTCACACTGTCAGAGGACA...AGCTGTGTACAGTGAGAAGGGATCCGGATGGGGGAGCTCTGTACAGAGGGCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000533596.1
ENST00000534650.5
CDS-3UTR GCA 90 bp GTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGTGTCGGGAGTCCTCATCAGTaGCCAAACAATTCGATTTTC +
Preference number: 4 (lower is better)
Translates to: VGYQPQSCCRLGTAVGSVGSPHQ*PNNSIF
Trigger: GAAAATCGAATTGTTTGGGCACTGATGAGGACTCCC...GACACTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000534650.5
CDS-3UTR GCA 90 bp GGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGTGTCTGGGGAGTCCTCATCAGTaGCCAAACAATTCGATTTTC +
Preference number: 4 (lower is better)
Translates to: GLSAPVLLPSWHCSGQCLGSPHQ*PNNSIF
Trigger: GAAAATCGAATTGTTTGGGCACTGATGAGGACTCCC...CAGACACTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000534650.5
CDS-3UTR GCA 90 bp CCAGCCCTCTGTACAGAGCTCCCCCATCCGGATCCCTTCTCACTGTACACAGCTGCCGGCCCAGCTCAATaGACTCAATGTTCTTCATCC +
Preference number: 4 (lower is better)
Translates to: PALCTELPHPDPFSLYTAAGPAQ*TQCSSS
Trigger: GGATGAAGAACATTGAGTGCATTGAGCTGGGCCGGC...AGCTGTGTACAGTGAGAAGGGATCCGGATGGGGGAGCTCTGTACAGAGGGCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000534650.5
CDS-3UTR GCA 90 bp GGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGTGTCTGCAAAGAAGGAGATGGTaGCCTTGCGGTAAATCTCAT +
Preference number: 4 (lower is better)
Translates to: GLSAPVLLPSWHCSGQCLQRRRW*PCGKSH
Trigger: ATGAGATTTACCGCAAGGGCACCATCTCCTTCTTTG...CAGACACTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000534650.5
CDS-3UTR GCA 90 bp GGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGTGTCTGATGAGATTGAGGTACTaGAGAGTGGAGATGACATCC +
Preference number: 4 (lower is better)
Translates to: GLSAPVLLPSWHCSGQCLMRLRY*RVEMTS
Trigger: GGATGTCATCTCCACTCTGCAGTACCTCAATCTCAT...CAGACACTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000533596.1
ENST00000534650.5
CDS-3UTR GCA 90 bp CCAGCCCTCTGTACAGAGCTCCCCCATCCGGATCCCTTCTCACTGTACACAGCTCCATCTCCCTTAGAGTaGTTTGTGGGAGCTGCAGTG +
Preference number: 4 (lower is better)
Translates to: PALCTELPHPDPFSLYTAPSPLE*FVGAAV
Trigger: CACTGCAGCTCCCACAAAGCACTCTAAGGGAGATGG...AGCTGTGTACAGTGAGAAGGGATCCGGATGGGGGAGCTCTGTACAGAGGGCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000533596.1
ENST00000534650.5
CDS-3UTR CCA 90 bp GTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGTGTCTCTTTCTTGGGGAACTaGATCTTCTTTAGGTCCAGC +
Preference number: 4 (lower is better)
Translates to: VGYQPQSCCRLGTAVGSVSFLGN*IFFRSS
Trigger: GCTGGACCTAAAGAAGATCCAGTTCCCCAAGAAAGA...GACACTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000534650.5
CDS-3UTR CCA 90 bp GGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGTGTCTGTCTTTCTTGGGGAACTaGATCTTCTTTAGGTCCAGC +
Preference number: 4 (lower is better)
Translates to: GLSAPVLLPSWHCSGQCLSFLGN*IFFRSS
Trigger: GCTGGACCTAAAGAAGATCCAGTTCCCCAAGAAAGA...CAGACACTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000534650.5
CDS-3UTR CCA 90 bp CCAGCCCTCTGTACAGAGCTCCCCCATCCGGATCCCTTCTCACTGTACACAGCTTGTGGTGAGTTCCTGTaGGTACGGGGAGAAGTACCA +
Preference number: 4 (lower is better)
Translates to: PALCTELPHPDPFSLYTACGEFL*VRGEVP
Trigger: TGGTACTTCTCCCCGTACCCACAGGAACTCACCACA...AGCTGTGTACAGTGAGAAGGGATCCGGATGGGGGAGCTCTGTACAGAGGGCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000534650.5
CDS-3UTR CCA 90 bp GGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGTGTCTGTCTCAAAGAAGGAGATaGTGCCCTTGCGGTAAATCT +
Preference number: 4 (lower is better)
Translates to: GLSAPVLLPSWHCSGQCLSQRRR*CPCGKS
Trigger: AGATTTACCGCAAGGGCACCATCTCCTTCTTTGAGA...CAGACACTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000534650.5
CDS-3UTR CCA 90 bp GTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGTGTCTCTCAAAGAAGGAGATaGTGCCCTTGCGGTAAATCT +
Preference number: 4 (lower is better)
Translates to: VGYQPQSCCRLGTAVGSVSQRRR*CPCGKS
Trigger: AGATTTACCGCAAGGGCACCATCTCCTTCTTTGAGA...GACACTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000534650.5
CDS-3UTR TCA 90 bp CCAGCCCTCTGTACAGAGCTCCCCCATCCGGATCCCTTCTCACTGTACACAGCTATCCACGATGTCCTCTaGCAGTGTGAGGATGTACTG +
Preference number: 4 (lower is better)
Translates to: PALCTELPHPDPFSLYTAIHDVL*QCEDVL
Trigger: CAGTACATCCTCACACTGTCAGAGGACATCGTGGAT...AGCTGTGTACAGTGAGAAGGGATCCGGATGGGGGAGCTCTGTACAGAGGGCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000533596.1
ENST00000534650.5
CDS-3UTR CCA 90 bp GGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGTGTCTGTTGATTCTTTCTCCTTaGAGAAGTAGCCCACGATGT +
Preference number: 4 (lower is better)
Translates to: GLSAPVLLPSWHCSGQCLLILSP*RSSPRC
Trigger: ACATCGTGGGCTACTTCTCCAAGGAGAAAGAATCAA...CAGACACTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000534650.5
CDS-3UTR GCA 90 bp CCAGCCCTCTGTACAGAGCTCCCCCATCCGGATCCCTTCTCACTGTACACAGCTTGCGGTAAATCTCATTaGCTGGAGGATGTCGTAGGT +
Preference number: 4 (lower is better)
Translates to: PALCTELPHPDPFSLYTACGKSH*LEDVVG
Trigger: ACCTACGACATCCTCCAGGCAATGAGATTTACCGCA...AGCTGTGTACAGTGAGAAGGGATCCGGATGGGGGAGCTCTGTACAGAGGGCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000534650.5
CDS-3UTR TCA 90 bp CCAGCCCTCTGTACAGAGCTCCCCCATCCGGATCCCTTCTCACTGTACACAGCTAGTCATACTCTGTCATaGCGTAGAAGAGGAAAGGGT +
Preference number: 4 (lower is better)
Translates to: PALCTELPHPDPFSLYTASHTLS*RRRGKG
Trigger: ACCCTTTCCTCTTCTACGTCATGACAGAGTATGACT...AGCTGTGTACAGTGAGAAGGGATCCGGATGGGGGAGCTCTGTACAGAGGGCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000534650.5
CDS-3UTR CCA 90 bp CCAGCCCTCTGTACAGAGCTCCCCCATCCGGATCCCTTCTCACTGTACACAGCTTCTCAAAGAAGGAGATaGTGCCCTTGCGGTAAATCT +
Preference number: 4 (lower is better)
Translates to: PALCTELPHPDPFSLYTASQRRR*CPCGKS
Trigger: AGATTTACCGCAAGGGCACCATCTCCTTCTTTGAGA...AGCTGTGTACAGTGAGAAGGGATCCGGATGGGGGAGCTCTGTACAGAGGGCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000534650.5
CDS-3UTR CAA 90 bp TCTGAGCCCGGAGCTCGCCTTGGTGCTGGGCACCAGTGGGCCCCTGCCAGGCCTGAGAAGTACCACGGCTaGAGGCGGTGCCGGCCCAGC +
Preference number: 5 (lower is better)
Translates to: SEPGARLGAGHQWAPARPEKYHG*RRCRPS
Trigger: GCTGGGCCGGCACCGCCTCAAGCCGTGGTACTTCTC...AGGCCTGGCAGGGGCCCACTGGTGCCCAGCACCAAGGCGAGCTCCGGGCTCAGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000534650.5
CDS CCA 90 bp TTCCGCCGCAGCACGGGTAGGCGGCAGCCCTCGATTATCTCCCCCTaGGGAGACAGCGCGACGCCAGGGTCGGCACCTCCGCCATCTTCC +
Preference number: 5 (lower is better)
Translates to: FRRSTGRRQPSIISP*GDSATPGSAPPPSS
Trigger: GGAAGATGGCGGAGGTGCCGACCCTGGCGTCGCGCTGTCTCCCCAGGGGGAGATAATCGAGGGCTGCCGCCTACCCGTGCTGCGGCGGAA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534104.5
CDS-3UTR CAA 90 bp TCTGAGCCCGGAGCTCGCCTTGGTGCTGGGCACCAGTGGGCCCCTGCCAGGCCTATCCGCAGGAGCCGCTaGAGCATGGCCCGCTCATGG +
Preference number: 5 (lower is better)
Translates to: SEPGARLGAGHQWAPARPIRRSR*SMARSW
Trigger: CCATGAGCGGGCCATGCTCAAGCGGCTCCTGCGGAT...AGGCCTGGCAGGGGCCCACTGGTGCCCAGCACCAAGGCGAGCTCCGGGCTCAGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000533596.1
ENST00000534650.5
CDS-3UTR CAA 90 bp TCTGAGCCCGGAGCTCGCCTTGGTGCTGGGCACCAGTGGGCCCCTGCCAGGCCTGGCCACTCATCTTCGTaGTCCTGGTTCCGCCGCAGC +
Preference number: 5 (lower is better)
Translates to: SEPGARLGAGHQWAPARPGHSSS*SWFRRS
Trigger: GCTGCGGCGGAACCAGGACAACGAAGATGAGTGGCC...AGGCCTGGCAGGGGCCCACTGGTGCCCAGCACCAAGGCGAGCTCCGGGCTCAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
CDS-3UTR CAA 90 bp TCTGAGCCCGGAGCTCGCCTTGGTGCTGGGCACCAGTGGGCCCCTGCCAGGCCTTTCGTTGAGCGGTGGTaGGGCTGCAGGCAGGAGCTG +
Preference number: 5 (lower is better)
Translates to: SEPGARLGAGHQWAPARPFVERW*GCRQEL
Trigger: CAGCTCCTGCCTGCAGCCCAACCACCGCTCAACGAA...AGGCCTGGCAGGGGCCCACTGGTGCCCAGCACCAAGGCGAGCTCCGGGCTCAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341318.9
ENST00000377046.7
CDS-3UTR CAA 90 bp CGGGGTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGGAGAAGTACCACGGCTaGAGGCGGTGCCGGCCCAGC +
Preference number: 5 (lower is better)
Translates to: RGGLSAPVLLPSWHCSGQEKYHG*RRCRPS
Trigger: GCTGGGCCGGCACCGCCTCAAGCCGTGGTACTTCTC...CTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCACCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000534650.5
CDS CCA 90 bp CCACCTTCCGTTTCGTTGAGCGGTGGTTGGGCTGCAGGCAGGAGCTaGAGGAGAGCGGCTGGTCAGGCTCGCCACCGGGAATGGCCTCCC +
Preference number: 5 (lower is better)
Translates to: PPSVSLSGGWAAGRS*RRAAGQARHREWPP
Trigger: GGGAGGCCATTCCCGGTGGCGAGCCTGACCAGCCGCTCTCCTCCAGCTCCTGCCTGCAGCCCAACCACCGCTCAACGAAACGGAAGGTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000377046.7
ENST00000525204.1
ENST00000530605.5
ENST00000531880.1
CDS-3UTR CAA 90 bp TCTGAGCCCGGAGCTCGCCTTGGTGCTGGGCACCAGTGGGCCCCTGCCAGGCCTCGCTCCTTGGGCAGGTaGAAGCGGAGTGTGATCTGG +
Preference number: 5 (lower is better)
Translates to: SEPGARLGAGHQWAPARPRSLGR*KRSVIW
Trigger: CCAGATCACACTCCGCTTCAACCTGCCCAAGGAGCG...AGGCCTGGCAGGGGCCCACTGGTGCCCAGCACCAAGGCGAGCTCCGGGCTCAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341318.9
ENST00000377046.7
CDS-3UTR CAA 90 bp TCTGAGCCCGGAGCTCGCCTTGGTGCTGGGCACCAGTGGGCCCCTGCCAGGCCTCGCTGGGCACTGGAGTaGCTGGTGAAACCACCTCCA +
Preference number: 5 (lower is better)
Translates to: SEPGARLGAGHQWAPARPRWALE*LVKPPP
Trigger: TGGAGGTGGTTTCACCAGCAACTCCAGTGCCCAGCG...AGGCCTGGCAGGGGCCCACTGGTGCCCAGCACCAAGGCGAGCTCCGGGCTCAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000534650.5
CDS-3UTR CAA 90 bp GCGGGGTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAATCCGCAGGAGCCGCTaGAGCATGGCCCGCTCATGG +
Preference number: 5 (lower is better)
Translates to: AGWAISPSPAAVLALQWAIRRSR*SMARSW
Trigger: CCATGAGCGGGCCATGCTCAAGCGGCTCCTGCGGAT...TGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCACCCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000533596.1
ENST00000534650.5
CDS-3UTR CAA 90 bp CGGGGTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGATCCGCAGGAGCCGCTaGAGCATGGCCCGCTCATGG +
Preference number: 5 (lower is better)
Translates to: RGGLSAPVLLPSWHCSGQIRRSR*SMARSW
Trigger: CCATGAGCGGGCCATGCTCAAGCGGCTCCTGCGGAT...CTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCACCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000533596.1
ENST00000534650.5
CDS-3UTR CAA 90 bp TCTGAGCCCGGAGCTCGCCTTGGTGCTGGGCACCAGTGGGCCCCTGCCAGGCCTCAGCGCCAGGCTCACTaGATGGTGATCTGTGGCCTC +
Preference number: 5 (lower is better)
Translates to: SEPGARLGAGHQWAPARPQRQAH*MVICGL
Trigger: GAGGCCACAGATCACCATCAAGTGAGCCTGGCGCTG...AGGCCTGGCAGGGGCCCACTGGTGCCCAGCACCAAGGCGAGCTCCGGGCTCAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533596.1
CDS CCA 90 bp CCGCTCCTTGGGCAGGTTGAAGCGGAGTGTGATCTGGACCGGGATTaGCAAGGTCTTCCCGCTGGCCTGCGCCGAGGCCGGCACCTCTCT +
Preference number: 5 (lower is better)
Translates to: PLLGQVEAECDLDRD*QGLPAGLRRGRHLS
Trigger: AGAGAGGTGCCGGCCTCGGCGCAGGCCAGCGGGAAGACCTTGCCAATCCCGGTCCAGATCACACTCCGCTTCAACCTGCCCAAGGAGCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341318.9
ENST00000377046.7
ENST00000525204.1
ENST00000531880.1
CDS CCA 90 bp CCGCTCCTTGGGCAGGTTGAAGCGGAGTGTGATCTGGACCGGGATTaGCAAGGTCTTCCCGCTGGCCTGCGCCGAGGCCGGCTCTCTCTC +
Preference number: 5 (lower is better)
Translates to: PLLGQVEAECDLDRD*QGLPAGLRRGRLSL
Trigger: GAGAGAGAGCCGGCCTCGGCGCAGGCCAGCGGGAAGACCTTGCCAATCCCGGTCCAGATCACACTCCGCTTCAACCTGCCCAAGGAGCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530605.5
CDS-3UTR CAA 90 bp GCGGGGTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGGCCACTCATCTTCGTaGTCCTGGTTCCGCCGCAGC +
Preference number: 5 (lower is better)
Translates to: AGWAISPSPAAVLALQWAGHSSS*SWFRRS
Trigger: GCTGCGGCGGAACCAGGACAACGAAGATGAGTGGCC...TGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCACCCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
CDS-3UTR CAA 90 bp CGGGGTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGGGCCACTCATCTTCGTaGTCCTGGTTCCGCCGCAGC +
Preference number: 5 (lower is better)
Translates to: RGGLSAPVLLPSWHCSGQGHSSS*SWFRRS
Trigger: GCTGCGGCGGAACCAGGACAACGAAGATGAGTGGCC...CTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCACCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
CDS-3UTR CAA 90 bp GGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGTGTCTGGAGAAGTACCACGGCTaGAGGCGGTGCCGGCCCAGC +
Preference number: 5 (lower is better)
Translates to: GLSAPVLLPSWHCSGQCLEKYHG*RRCRPS
Trigger: GCTGGGCCGGCACCGCCTCAAGCCGTGGTACTTCTC...CAGACACTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000534650.5
CDS-3UTR CAA 90 bp TCTGAGCCCGGAGCTCGCCTTGGTGCTGGGCACCAGTGGGCCCCTGCCAGGCCTAGACTACGGCCGTACTaGAGGCAGAACTCGCACAGG +
Preference number: 5 (lower is better)
Translates to: SEPGARLGAGHQWAPARPRLRPY*RQNSHR
Trigger: CCTGTGCGAGTTCTGCCTCAAGTACGGCCGTAGTCT...AGGCCTGGCAGGGGCCCACTGGTGCCCAGCACCAAGGCGAGCTCCGGGCTCAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000534650.5
CDS-3UTR CAA 90 bp GCGGGGTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAAGTCCTGCTGCCGTCTaGGCACTGCAGTGGGCAGTG +
Preference number: 5 (lower is better)
Translates to: AGWAISPSPAAVLALQWASPAAV*ALQWAV
Trigger: CACTGCCCACTGCAGTGCCAAGACGGCAGCAGGACT...TGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCACCCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000533596.1
ENST00000534650.5
CDS-3UTR CAA 90 bp CGGGGTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGAGTCCTGCTGCCGTCTaGGCACTGCAGTGGGCAGTG +
Preference number: 5 (lower is better)
Translates to: RGGLSAPVLLPSWHCSGQSPAAV*ALQWAV
Trigger: CACTGCCCACTGCAGTGCCAAGACGGCAGCAGGACT...CTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCACCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000533596.1
ENST00000534650.5
CDS-3UTR CAA 90 bp GCGGGGTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCACGCTGGGCACTGGAGTaGCTGGTGAAACCACCTCCA +
Preference number: 5 (lower is better)
Translates to: AGWAISPSPAAVLALQWARWALE*LVKPPP
Trigger: TGGAGGTGGTTTCACCAGCAACTCCAGTGCCCAGCG...TGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCACCCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000534650.5
CDS-3UTR CAA 90 bp GGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGTGTCTGATCCGCAGGAGCCGCTaGAGCATGGCCCGCTCATGG +
Preference number: 5 (lower is better)
Translates to: GLSAPVLLPSWHCSGQCLIRRSR*SMARSW
Trigger: CCATGAGCGGGCCATGCTCAAGCGGCTCCTGCGGAT...CAGACACTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000533596.1
ENST00000534650.5
CDS-3UTR CAA 90 bp TCTGAGCCCGGAGCTCGCCTTGGTGCTGGGCACCAGTGGGCCCCTGCCAGGCCTCTCTTGCTCCAGTCCTaGGGAGTGAAGTGCAGACAC +
Preference number: 5 (lower is better)
Translates to: SEPGARLGAGHQWAPARPLLLQS*GVKCRH
Trigger: GTGTCTGCACTTCACTCCCAAGGACTGGAGCAAGAG...AGGCCTGGCAGGGGCCCACTGGTGCCCAGCACCAAGGCGAGCTCCGGGCTCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000533596.1
ENST00000534650.5
CDS-3UTR CAA 90 bp GCGGGGTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCACACCACTTCCCCCTCTaGCTCCAGTCCTTGGGAGTG +
Preference number: 5 (lower is better)
Translates to: AGWAISPSPAAVLALQWAHHFPL*LQSLGV
Trigger: CACTCCCAAGGACTGGAGCAAGAGGGGGAAGTGGTG...TGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCACCCCGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000533596.1
ENST00000534650.5
CDS-3UTR CAA 90 bp CGGGGTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGTGTAGAGGGGGACCTTaGAGAGACACCGCGACCCAG +
Preference number: 5 (lower is better)
Translates to: RGGLSAPVLLPSWHCSGQCRGGP*RDTATQ
Trigger: CTGGGTCGCGGTGTCTCTCAAAGGTCCCCCTCTACA...CTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCACCCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000352980.8
ENST00000377046.7
CDS-3UTR CAA 90 bp TCTGAGCCCGGAGCTCGCCTTGGTGCTGGGCACCAGTGGGCCCCTGCCAGGCCTTTCTTAGTGGGGGTCTaGGCCTCTTTCTTGGGGAAC +
Preference number: 5 (lower is better)
Translates to: SEPGARLGAGHQWAPARPFLVGV*ASFLGN
Trigger: GTTCCCCAAGAAAGAGGCCAAGACCCCCACTAAGAA...AGGCCTGGCAGGGGCCCACTGGTGCCCAGCACCAAGGCGAGCTCCGGGCTCAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000534650.5
CDS-3UTR CAA 90 bp GTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGTGTCTTCGTTGAGCGGTGGTaGGGCTGCAGGCAGGAGCTG +
Preference number: 5 (lower is better)
Translates to: VGYQPQSCCRLGTAVGSVFVERW*GCRQEL
Trigger: CAGCTCCTGCCTGCAGCCCAACCACCGCTCAACGAA...GACACTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341318.9
ENST00000377046.7
CDS-3UTR CAA 90 bp CGGGGTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGAGACTACGGCCGTACTaGAGGCAGAACTCGCACAGG +
Preference number: 5 (lower is better)
Translates to: RGGLSAPVLLPSWHCSGQRLRPY*RQNSHR
Trigger: CCTGTGCGAGTTCTGCCTCAAGTACGGCCGTAGTCT...CTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCACCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000534650.5
CDS-3UTR CAA 90 bp CGGGGTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGGTGAAGTGCAGACACTaGGAGTCGATCCGCAGGAGC +
Preference number: 5 (lower is better)
Translates to: RGGLSAPVLLPSWHCSGQVKCRH*ESIRRS
Trigger: GCTCCTGCGGATCGACTCCAAGTGTCTGCACTTCAC...CTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCACCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000533596.1
ENST00000534650.5
CDS-3UTR CAA 90 bp GCGGGGTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGTGAAGTGCAGACACTaGGAGTCGATCCGCAGGAGC +
Preference number: 5 (lower is better)
Translates to: AGWAISPSPAAVLALQWAVKCRH*ESIRRS
Trigger: GCTCCTGCGGATCGACTCCAAGTGTCTGCACTTCAC...TGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCACCCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000533596.1
ENST00000534650.5
CDS-3UTR CAA 90 bp GTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGTGTCAGTCCTGCTGCCGTCTaGGCACTGCAGTGGGCAGTG +
Preference number: 5 (lower is better)
Translates to: VGYQPQSCCRLGTAVGSVSPAAV*ALQWAV
Trigger: CACTGCCCACTGCAGTGCCAAGACGGCAGCAGGACT...GACACTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000533596.1
ENST00000534650.5
CDS TCA 90 bp CCGATAGTGGGTCCACTACCCCCTGGCCGCAGCACACATACTCACTaGACTCGATCAGCAGCTTGCCGTAGCCCCGGCGCTGGTAGGGAG +
Preference number: 5 (lower is better)
Translates to: PIVGPLPPGRSTHTH*TRSAACRSPGAGRE
Trigger: CTCCCTACCAGCGCCGGGGCTACGGCAAGCTGCTGATCGAGTTCAGTGAGTATGTGTGCTGCGGCCAGGGGGTAGTGGACCCACTATCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533441.1
CDS CCA 90 bp GGGTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTaGGCAGTGTCTGGTCACCACTTCCCCCTCTTGCTCCAGTCCTTG +
Preference number: 5 (lower is better)
Translates to: GWAISPSPAAVLALQ*AVSGHHFPLLLQSL
Trigger: CAAGGACTGGAGCAAGAGGGGGAAGTGGTGACCAGACACTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000533596.1
ENST00000534650.5
CDS-3UTR CAA 90 bp GGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGTGTCTGCGCTCCTTGGGCAGGTaGAAGCGGAGTGTGATCTGG +
Preference number: 5 (lower is better)
Translates to: GLSAPVLLPSWHCSGQCLRSLGR*KRSVIW
Trigger: CCAGATCACACTCCGCTTCAACCTGCCCAAGGAGCG...CAGACACTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341318.9
ENST00000377046.7
CDS-3UTR CAA 90 bp GTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGTGTCCCACCTTCCGTTTCGTaGAGCGGTGGTTGGGCTGCA +
Preference number: 5 (lower is better)
Translates to: VGYQPQSCCRLGTAVGSVPPSVS*SGGWAA
Trigger: TGCAGCCCAACCACCGCTCAACGAAACGGAAGGTGG...GACACTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341318.9
ENST00000377046.7
CDS-3UTR CAA 90 bp GGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGTGTCTGCCACCTTCCGTTTCGTaGAGCGGTGGTTGGGCTGCA +
Preference number: 5 (lower is better)
Translates to: GLSAPVLLPSWHCSGQCLPPSVS*SGGWAA
Trigger: TGCAGCCCAACCACCGCTCAACGAAACGGAAGGTGG...CAGACACTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341318.9
ENST00000377046.7
CDS-3UTR CAA 90 bp GGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGTGTCTGCGCTGGGCACTGGAGTaGCTGGTGAAACCACCTCCA +
Preference number: 5 (lower is better)
Translates to: GLSAPVLLPSWHCSGQCLRWALE*LVKPPP
Trigger: TGGAGGTGGTTTCACCAGCAACTCCAGTGCCCAGCG...CAGACACTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000534650.5
CDS-3UTR CAA 90 bp GCGGGGTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCACTCTTGCTCCAGTCCTaGGGAGTGAAGTGCAGACAC +
Preference number: 5 (lower is better)
Translates to: AGWAISPSPAAVLALQWALLLQS*GVKCRH
Trigger: GTGTCTGCACTTCACTCCCAAGGACTGGAGCAAGAG...TGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCACCCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000533596.1
ENST00000534650.5
CDS-3UTR CAA 90 bp GGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGTGTCTGCACCACTTCCCCCTCTaGCTCCAGTCCTTGGGAGTG +
Preference number: 5 (lower is better)
Translates to: GLSAPVLLPSWHCSGQCLHHFPL*LQSLGV
Trigger: CACTCCCAAGGACTGGAGCAAGAGGGGGAAGTGGTG...CAGACACTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000533596.1
ENST00000534650.5
CDS-3UTR CAA 90 bp GTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGTGTCCACCACTTCCCCCTCTaGCTCCAGTCCTTGGGAGTG +
Preference number: 5 (lower is better)
Translates to: VGYQPQSCCRLGTAVGSVHHFPL*LQSLGV
Trigger: CACTCCCAAGGACTGGAGCAAGAGGGGGAAGTGGTG...GACACTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000533596.1
ENST00000534650.5
CDS-3UTR CAA 90 bp GGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGTGTCTGTGTAGAGGGGGACCTTaGAGAGACACCGCGACCCAG +
Preference number: 5 (lower is better)
Translates to: GLSAPVLLPSWHCSGQCLCRGGP*RDTATQ
Trigger: CTGGGTCGCGGTGTCTCTCAAAGGTCCCCCTCTACA...CAGACACTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000352980.8
ENST00000377046.7
CDS CCA 90 bp GCAGAACTCGCACAGGTAGAGGACAGGCAATGTGGTGAGTTCCTGTaGGTACGGGGAGAAGTACCACGGCTTGAGGCGGTGCCGGCCCAG +
Preference number: 5 (lower is better)
Translates to: AELAQVEDRQCGEFL*VRGEVPRLEAVPAQ
Trigger: CTGGGCCGGCACCGCCTCAAGCCGTGGTACTTCTCCCCGTACCCACAGGAACTCACCACATTGCCTGTCCTCTACCTGTGCGAGTTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000527544.5
ENST00000530446.5
ENST00000531880.1
ENST00000534650.5
CDS CCA 90 bp CAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGTGTCTaGTCACCACTTCCCCCTCTTGCTCCAGTCCTTGGGAGTGAAGTG +
Preference number: 5 (lower is better)
Translates to: QPQSCCRLGTAVGSV*SPLPPLAPVLGSEV
Trigger: CACTTCACTCCCAAGGACTGGAGCAAGAGGGGGAAGTGGTGACCAGACACTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000533596.1
ENST00000534650.5
CDS-3UTR CAA 90 bp CGGGGTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGTTCTTAGTGGGGGTCTaGGCCTCTTTCTTGGGGAAC +
Preference number: 5 (lower is better)
Translates to: RGGLSAPVLLPSWHCSGQFLVGV*ASFLGN
Trigger: GTTCCCCAAGAAAGAGGCCAAGACCCCCACTAAGAA...CTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCACCCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000534650.5
CDS-3UTR CAA 90 bp GGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGTGTCTGAGACTACGGCCGTACTaGAGGCAGAACTCGCACAGG +
Preference number: 5 (lower is better)
Translates to: GLSAPVLLPSWHCSGQCLRLRPY*RQNSHR
Trigger: CCTGTGCGAGTTCTGCCTCAAGTACGGCCGTAGTCT...CAGACACTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000534650.5
CDS-3UTR CAA 90 bp CCAGCCCTCTGTACAGAGCTCCCCCATCCGGATCCCTTCTCACTGTACACAGCTATCCGCAGGAGCCGCTaGAGCATGGCCCGCTCATGG +
Preference number: 5 (lower is better)
Translates to: PALCTELPHPDPFSLYTAIRRSR*SMARSW
Trigger: CCATGAGCGGGCCATGCTCAAGCGGCTCCTGCGGAT...AGCTGTGTACAGTGAGAAGGGATCCGGATGGGGGAGCTCTGTACAGAGGGCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000533596.1
ENST00000534650.5
CDS-3UTR CAA 90 bp GGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGTGTCTGGTGAAGTGCAGACACTaGGAGTCGATCCGCAGGAGC +
Preference number: 5 (lower is better)
Translates to: GLSAPVLLPSWHCSGQCLVKCRH*ESIRRS
Trigger: GCTCCTGCGGATCGACTCCAAGTGTCTGCACTTCAC...CAGACACTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000533596.1
ENST00000534650.5
CDS-3UTR CAA 90 bp GTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGTGTCGTGAAGTGCAGACACTaGGAGTCGATCCGCAGGAGC +
Preference number: 5 (lower is better)
Translates to: VGYQPQSCCRLGTAVGSVVKCRH*ESIRRS
Trigger: GCTCCTGCGGATCGACTCCAAGTGTCTGCACTTCAC...GACACTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000533596.1
ENST00000534650.5
CDS GCA 90 bp GTGTTACAAGCCTCAGGCCGAGCCCTAGGTGGAAACCCCATAACGTaGACAGCCAGTGGCGGTCTACTGAGTCCGTCACGTGACGCCCAC +
Preference number: 5 (lower is better)
Translates to: VLQASGRALGGNPIT*TASGGLLSPSRDAH
Trigger: GTGGGCGTCACGTGACGGACTCAGTAGACCGCCACTGGCTGTGCACGTTATGGGGTTTCCACCTAGGGCTCGGCCTGAGGCTTGTAACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377046.7
CDS CCA 90 bp CACTTGGAGTCGATCCGCAGGAGCCGCTTGAGCATGGCCCGCTCATaGCCATCCACGATGTCCTCTGACAGTGTGAGGATGTACTGGCCC +
Preference number: 5 (lower is better)
Translates to: HLESIRRSRLSMARS*PSTMSSDSVRMYWP
Trigger: GGGCCAGTACATCCTCACACTGTCAGAGGACATCGTGGATGGCCATGAGCGGGCCATGCTCAAGCGGCTCCTGCGGATCGACTCCAAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000533596.1
ENST00000534650.5
CDS-3UTR CAA 90 bp GTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGTGTCCTCTTGCTCCAGTCCTaGGGAGTGAAGTGCAGACAC +
Preference number: 5 (lower is better)
Translates to: VGYQPQSCCRLGTAVGSVLLLQS*GVKCRH
Trigger: GTGTCTGCACTTCACTCCCAAGGACTGGAGCAAGAG...GACACTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000533596.1
ENST00000534650.5
CDS TCA 90 bp GGCGGTGCCGGCCCAGCTCAATGCACTCAATGTTCTTCATCCGGGTaGCGATGTCGTCGTGGCTTCGATCAGACACCAGGCTGCCAGTCA +
Preference number: 5 (lower is better)
Translates to: GGAGPAQCTQCSSSG*RCRRGFDQTPGCQS
Trigger: TGACTGGCAGCCTGGTGTCTGATCGAAGCCACGACGACATCGTCACCCGGATGAAGAACATTGAGTGCATTGAGCTGGGCCGGCACCGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000527544.5
ENST00000528198.5
ENST00000530446.5
ENST00000531880.1
ENST00000534650.5
ENST00000534681.1
CDS TCA 90 bp AAAAACCGAGGCCGGGGCTGTCTCGCTGGGCACTGGAGTTGCTGGTaGAACCACCTCCACCTTCCGTTTCACCTCTCTCTCTGGAGAGCC +
Preference number: 5 (lower is better)
Translates to: KNRGRGCLAGHWSCW*NHLHLPFHLSLWRA
Trigger: GGCTCTCCAGAGAGAGAGGTGAAACGGAAGGTGGAGGTGGTTTCACCAGCAACTCCAGTGCCCAGCGAGACAGCCCCGGCCTCGGTTTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000352980.8
ENST00000527544.5
ENST00000528198.5
ENST00000530446.5
ENST00000534104.5
ENST00000534293.5
ENST00000534650.5
ENST00000534681.1
CDS GCA 90 bp GTGAGTTCCTGTGGGTACGGGGAGAAGTACCACGGCTTGAGGCGGTaGCGGCCCAGCTCAATGCACTCAATGTTCTTCATCCGGGTGACG +
Preference number: 5 (lower is better)
Translates to: VSSCGYGEKYHGLRR*RPSSMHSMFFIRVT
Trigger: CGTCACCCGGATGAAGAACATTGAGTGCATTGAGCTGGGCCGGCACCGCCTCAAGCCGTGGTACTTCTCCCCGTACCCACAGGAACTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000527544.5
ENST00000530446.5
ENST00000531880.1
ENST00000534650.5
ENST00000534681.1
CDS GCA 90 bp TCTGGTCACCACTTCCCCCTCTTGCTCCAGTCCTTGGGAGTGAAGTaGAGACACTTGGAGTCGATCCGCAGGAGCCGCTTGAGCATGGCC +
Preference number: 5 (lower is better)
Translates to: SGHHFPLLLQSLGVK*RHLESIRRSRLSMA
Trigger: GGCCATGCTCAAGCGGCTCCTGCGGATCGACTCCAAGTGTCTGCACTTCACTCCCAAGGACTGGAGCAAGAGGGGGAAGTGGTGACCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000533596.1
ENST00000534650.5
CDS-3UTR CAA 90 bp TCTGAGCCCGGAGCTCGCCTTGGTGCTGGGCACCAGTGGGCCCCTGCCAGGCCTCATTGTAGTCTTCCGTaGATTCTTTCTCCTTGGAGA +
Preference number: 5 (lower is better)
Translates to: SEPGARLGAGHQWAPARPHCSLP*ILSPWR
Trigger: TCTCCAAGGAGAAAGAATCAACGGAAGACTACAATG...AGGCCTGGCAGGGGCCCACTGGTGCCCAGCACCAAGGCGAGCTCCGGGCTCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000534650.5
CDS-3UTR CAA 90 bp CCAGCCCTCTGTACAGAGCTCCCCCATCCGGATCCCTTCTCACTGTACACAGCTCACCACTTCCCCCTCTaGCTCCAGTCCTTGGGAGTG +
Preference number: 5 (lower is better)
Translates to: PALCTELPHPDPFSLYTAHHFPL*LQSLGV
Trigger: CACTCCCAAGGACTGGAGCAAGAGGGGGAAGTGGTG...AGCTGTGTACAGTGAGAAGGGATCCGGATGGGGGAGCTCTGTACAGAGGGCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000533596.1
ENST00000534650.5
CDS-3UTR CAA 90 bp TCTGAGCCCGGAGCTCGCCTTGGTGCTGGGCACCAGTGGGCCCCTGCCAGGCCTTATAGAAACAATTTATaGCCGGGGGCAATAGGGGTA +
Preference number: 5 (lower is better)
Translates to: SEPGARLGAGHQWAPARPYRNNL*PGAIGV
Trigger: TACCCCTATTGCCCCCGGCAATAAATTGTTTCTATA...AGGCCTGGCAGGGGCCCACTGGTGCCCAGCACCAAGGCGAGCTCCGGGCTCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000533596.1
ENST00000534650.5
CDS TCA 90 bp GTCGTGGCTTCGATCAGACACCAGGCTGCCAGTCATGCGTGGTGCTaGCGGTATTCCATCAGAGCTGTCCTGGGAGTCCTCATCAGTGCC +
Preference number: 5 (lower is better)
Translates to: VVASIRHQAASHAWC*RYSIRAVLGVLISA
Trigger: GGCACTGATGAGGACTCCCAGGACAGCTCTGATGGAATACCGTCAGCACCACGCATGACTGGCAGCCTGGTGTCTGATCGAAGCCACGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000527544.5
ENST00000528198.5
ENST00000530446.5
ENST00000531880.1
ENST00000534104.5
ENST00000534650.5
ENST00000534681.1
CDS TCA 90 bp GGCTATGAGAATAGCATAGACAGGGGCCTTAGACAGGCCAGGCTATaGGACTCCACCCTTCCACGACCTGAACTCCACCCCCAGGCCGGA +
Preference number: 5 (lower is better)
Translates to: GYENSIDRGLRQARL*DSTLPRPELHPQAG
Trigger: TCCGGCCTGGGGGTGGAGTTCAGGTCGTGGAAGGGTGGAGTCTCATAGCCTGGCCTGTCTAAGGCCCCTGTCTATGCTATTCTCATAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525204.1
ENST00000534650.5
CDS GCA 90 bp TGGTGTCTGAGTGCCTCCCTGCTCAGTCAGGCAAGTTTCCCGCCTTaGTCCGCACACCTCCATTCTAAGCCTGACCAGGAGAGACCACTG +
Preference number: 5 (lower is better)
Translates to: WCLSASLLSQASFPP*SAHLHSKPDQERPL
Trigger: CAGTGGTCTCTCCTGGTCAGGCTTAGAATGGAGGTGTGCGGAGCAAGGCGGGAAACTTGCCTGACTGAGCAGGGAGGCACTCAGACACCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533441.1
CDS GCA 90 bp TGGCCAGTGGTTCAGGGTCAACCAGGAGCTTCACTGTTCGTGCTATaGCCCAGGCTGCTAGGTGATGAGTGTTCTTCCCTGGCTGGGCCT +
Preference number: 5 (lower is better)
Translates to: WPVVQGQPGASLFVL*PRLLGDECSSLAGP
Trigger: AGGCCCAGCCAGGGAAGAACACTCATCACCTAGCAGCCTGGGGCATAGCACGAACAGTGAAGCTCCTGGTTGACCCTGAACCACTGGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533441.1
CDS CCA 90 bp GGAGTCCTCATCAGTGCCCAAACAATTCGATTTTCGCTTCCGTCCTaGCTGGGCTGCCACTGCCCTACGGGCGGCTCCATTCTGGGGAAA +
Preference number: 5 (lower is better)
Translates to: GVLISAQTIRFSLPS*LGCHCPTGGSILGK
Trigger: TTTCCCCAGAATGGAGCCGCCCGTAGGGCAGTGGCAGCCCAGCCAGGACGGAAGCGAAAATCGAATTGTTTGGGCACTGATGAGGACTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000527544.5
ENST00000528198.5
ENST00000530446.5
ENST00000531880.1
ENST00000534104.5
ENST00000534650.5
ENST00000534681.1
CDS-3UTR CAA 90 bp CCAGCCCTCTGTACAGAGCTCCCCCATCCGGATCCCTTCTCACTGTACACAGCTAGACTACGGCCGTACTaGAGGCAGAACTCGCACAGG +
Preference number: 5 (lower is better)
Translates to: PALCTELPHPDPFSLYTARLRPY*RQNSHR
Trigger: CCTGTGCGAGTTCTGCCTCAAGTACGGCCGTAGTCT...AGCTGTGTACAGTGAGAAGGGATCCGGATGGGGGAGCTCTGTACAGAGGGCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000534650.5
CDS CCA 90 bp GGTTGCCAAGGCAGGCTGCCTAGTTCCTATCATGGCCCTGCCACTTaGCAGTTCTATGCCCTCCACTTCTCTGTGCCTCAGTTCCCTCAG +
Preference number: 5 (lower is better)
Translates to: GCQGRLPSSYHGPAT*QFYALHFSVPQFPQ
Trigger: CTGAGGGAACTGAGGCACAGAGAAGTGGAGGGCATAGAACTGCCAAGTGGCAGGGCCATGATAGGAACTAGGCAGCCTGCCTTGGCAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525600.1
CDS CCA 90 bp AAAGGCTTGTCACCACTCTGGGTATCCCGCCTTGAGCCTGGCCAGTaGTTCAGGGTCAACCAGGAGCTTCACTGTTCGTGCTATGCCCCA +
Preference number: 5 (lower is better)
Translates to: KGLSPLWVSRLEPGQ*FRVNQELHCSCYAP
Trigger: TGGGGCATAGCACGAACAGTGAAGCTCCTGGTTGACCCTGAACCACTGGCCAGGCTCAAGGCGGGATACCCAGAGTGGTGACAAGCCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533441.1
CDS CCA 90 bp GAGTTCCTCATCAGTGCCCAAACAATTCGATTTTCGCTTCCGTCCTaGCTGGGCTGCCACTGCCCTACGGGCGGCTCCATTCTGGGGAAA +
Preference number: 5 (lower is better)
Translates to: EFLISAQTIRFSLPS*LGCHCPTGGSILGK
Trigger: TTTCCCCAGAATGGAGCCGCCCGTAGGGCAGTGGCAGCCCAGCCAGGACGGAAGCGAAAATCGAATTGTTTGGGCACTGATGAGGAACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534293.5
CDS-3UTR CAA 90 bp GCGGGGTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCACATTGTAGTCTTCCGTaGATTCTTTCTCCTTGGAGA +
Preference number: 5 (lower is better)
Translates to: AGWAISPSPAAVLALQWAHCSLP*ILSPWR
Trigger: TCTCCAAGGAGAAAGAATCAACGGAAGACTACAATG...TGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCACCCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000534650.5
CDS-3UTR CAA 90 bp CGGGGTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGATGACATCCTCCTTCTaGATGCTGGTGATTTCACTA +
Preference number: 5 (lower is better)
Translates to: RGGLSAPVLLPSWHCSGQMTSSF*MLVISL
Trigger: TAGTGAAATCACCAGCATCAAGAAGGAGGATGTCAT...CTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCACCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000533596.1
ENST00000534650.5
CDS-3UTR CAA 90 bp CCAGCCCTCTGTACAGAGCTCCCCCATCCGGATCCCTTCTCACTGTACACAGCTCTCTTGCTCCAGTCCTaGGGAGTGAAGTGCAGACAC +
Preference number: 5 (lower is better)
Translates to: PALCTELPHPDPFSLYTALLLQS*GVKCRH
Trigger: GTGTCTGCACTTCACTCCCAAGGACTGGAGCAAGAG...AGCTGTGTACAGTGAGAAGGGATCCGGATGGGGGAGCTCTGTACAGAGGGCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000533596.1
ENST00000534650.5
CDS-3UTR CAA 90 bp GCGGGGTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCATATAGAAACAATTTATaGCCGGGGGCAATAGGGGTA +
Preference number: 5 (lower is better)
Translates to: AGWAISPSPAAVLALQWAYRNNL*PGAIGV
Trigger: TACCCCTATTGCCCCCGGCAATAAATTGTTTCTATA...TGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCACCCCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000533596.1
ENST00000534650.5
CDS TCA 90 bp CTCCTCAGTGTTGAAAAGCCTGTGTGCCAGATGTGTGATGGTGTCTaGGTGCCTCCCTGCTCAGTCAGGCAAGTTTCCCGCCTTGCTCCG +
Preference number: 5 (lower is better)
Translates to: LLSVEKPVCQMCDGV*VPPCSVRQVSRLAP
Trigger: CGGAGCAAGGCGGGAAACTTGCCTGACTGAGCAGGGAGGCACTCAGACACCATCACACATCTGGCACACAGGCTTTTCAACACTGAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533441.1
CDS TCA 90 bp GATGGCTCAGGACAGAATGCCAAAGACTGTCCCCCAACCCTACCCTaGTGCCCCACCTCAGGCCCAGAACTCACAGTCAATGTAATGGAC +
Preference number: 5 (lower is better)
Translates to: DGSGQNAKDCPPTLP*CPTSGPELTVNVMD
Trigger: GTCCATTACATTGACTGTGAGTTCTGGGCCTGAGGTGGGGCATCAGGGTAGGGTTGGGGGACAGTCTTTGGCATTCTGTCCTGAGCCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534681.1
CDS GCA 90 bp TCAGTGTTGAAAAGCCTGTGTGCCAGATGTGTGATGGTGTCTGAGTaGCTCCCTGCTCAGTCAGGCAAGTTTCCCGCCTTGCTCCGCACA +
Preference number: 5 (lower is better)
Translates to: SVLKSLCARCVMVSE*LPAQSGKFPALLRT
Trigger: TGTGCGGAGCAAGGCGGGAAACTTGCCTGACTGAGCAGGGAGGCACTCAGACACCATCACACATCTGGCACACAGGCTTTTCAACACTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533441.1
CDS CCA 90 bp AGCTCAATGCACTCAATGTTCTTCATCCGGGTGACGATGTCGTCGTaGCTTCGATCAGACACCAGGCTGCCAGTCATGCGTGGTGCTGAC +
Preference number: 5 (lower is better)
Translates to: SSMHSMFFIRVTMSS*LRSDTRLPVMRGAD
Trigger: GTCAGCACCACGCATGACTGGCAGCCTGGTGTCTGATCGAAGCCACGACGACATCGTCACCCGGATGAAGAACATTGAGTGCATTGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000527544.5
ENST00000528198.5
ENST00000530446.5
ENST00000531880.1
ENST00000534650.5
ENST00000534681.1
CDS-3UTR CAA 90 bp GGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGTGTCTGCATTGTAGTCTTCCGTaGATTCTTTCTCCTTGGAGA +
Preference number: 5 (lower is better)
Translates to: GLSAPVLLPSWHCSGQCLHCSLP*ILSPWR
Trigger: TCTCCAAGGAGAAAGAATCAACGGAAGACTACAATG...CAGACACTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000534650.5
CDS-3UTR CAA 90 bp GTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGTGTCCATTGTAGTCTTCCGTaGATTCTTTCTCCTTGGAGA +
Preference number: 5 (lower is better)
Translates to: VGYQPQSCCRLGTAVGSVHCSLP*ILSPWR
Trigger: TCTCCAAGGAGAAAGAATCAACGGAAGACTACAATG...GACACTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000534650.5
CDS-3UTR CAA 90 bp GGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGTGTCTGATTTCACTAATCTCATaGATGGTGATCTGTGGCCTC +
Preference number: 5 (lower is better)
Translates to: GLSAPVLLPSWHCSGQCLISLIS*MVICGL
Trigger: GAGGCCACAGATCACCATCAATGAGATTAGTGAAAT...CAGACACTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000534650.5
CDS-3UTR CAA 90 bp GTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGTGTCATTTCACTAATCTCATaGATGGTGATCTGTGGCCTC +
Preference number: 5 (lower is better)
Translates to: VGYQPQSCCRLGTAVGSVISLIS*MVICGL
Trigger: GAGGCCACAGATCACCATCAATGAGATTAGTGAAAT...GACACTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000534650.5
CDS-3UTR CAA 90 bp GGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGTGTCTGATGACATCCTCCTTCTaGATGCTGGTGATTTCACTA +
Preference number: 5 (lower is better)
Translates to: GLSAPVLLPSWHCSGQCLMTSSF*MLVISL
Trigger: TAGTGAAATCACCAGCATCAAGAAGGAGGATGTCAT...CAGACACTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000533596.1
ENST00000534650.5
CDS-3UTR CAA 90 bp GTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGTGTCTATAGAAACAATTTATaGCCGGGGGCAATAGGGGTA +
Preference number: 5 (lower is better)
Translates to: VGYQPQSCCRLGTAVGSVYRNNL*PGAIGV
Trigger: TACCCCTATTGCCCCCGGCAATAAATTGTTTCTATA...GACACTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000533596.1
ENST00000534650.5
CDS-3UTR CAA 90 bp GGGCTATCAGCCCCAGTCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGTGTCTGTATAGAAACAATTTATaGCCGGGGGCAATAGGGGTA +
Preference number: 5 (lower is better)
Translates to: GLSAPVLLPSWHCSGQCLYRNNL*PGAIGV
Trigger: TACCCCTATTGCCCCCGGCAATAAATTGTTTCTATA...CAGACACTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000533596.1
ENST00000534650.5
CDS TCA 90 bp GAGCCGCTTGAGCATGGCCCGCTCATGGCCATCCACGATGTCCTCTaGCAGTGTGAGGATGTACTGGCCCTTGTAGTAGTTGATGAGATT +
Preference number: 5 (lower is better)
Translates to: EPLEHGPLMAIHDVL*QCEDVLALVVVDEI
Trigger: AATCTCATCAACTACTACAAGGGCCAGTACATCCTCACACTGTCAGAGGACATCGTGGATGGCCATGAGCGGGCCATGCTCAAGCGGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000533596.1
ENST00000534650.5
CDS CCA 90 bp GGAAGTCCGTTCTTAGTGGGGGTCTTGGCCTCTTTCTTGGGGAACTaGATCTTCTTTAGGTCCAGCCGCTCATGCGTCACCCATTCATCC +
Preference number: 5 (lower is better)
Translates to: GSPFLVGVLASFLGN*IFFRSSRSCVTHSS
Trigger: GGATGAATGGGTGACGCATGAGCGGCTGGACCTAAAGAAGATCCAGTTCCCCAAGAAAGAGGCCAAGACCCCCACTAAGAACGGACTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 14 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000525204.1
ENST00000527544.5
ENST00000528198.5
ENST00000530446.5
ENST00000530605.5
ENST00000531880.1
ENST00000532042.5
ENST00000534104.5
ENST00000534293.5
ENST00000534650.5
ENST00000534681.1
CDS CCA 90 bp CCCCACCCTCGCCTTCTGAAGGACACAGGACTAGCTACTGGACTCTaGGAGCTACATGTGCAATTTGGCCCCCATCCTTTGCAAGATGAA +
Preference number: 5 (lower is better)
Translates to: PHPRLLKDTGLATGL*ELHVQFGPHPLQDE
Trigger: TTCATCTTGCAAAGGATGGGGGCCAAATTGCACATGTAGCTCCCAGAGTCCAGTAGCTAGTCCTGTGTCCTTCAGAAGGCGAGGGTGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532042.5
CDS GCA 90 bp GCCTCTTTCTTGGGGAACTGGATCTTCTTTAGGTCCAGCCGCTCATaGGTCACCCATTCATCCAGACGTTTGTTGACTGTAGCAGTGGGG +
Preference number: 5 (lower is better)
Translates to: ASFLGNWIFFRSSRS*VTHSSRRLLTVAVG
Trigger: CCCCACTGCTACAGTCAACAAACGTCTGGATGAATGGGTGACGCATGAGCGGCTGGACCTAAAGAAGATCCAGTTCCCCAAGAAAGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534681.1
CDS CCA 90 bp TATCAAACCCCACCCTCGCCTTCTGAAGGACACAGGACTAGCTACTaGACTCTGGGAGCTACATGTGCAATTTGGCCCCCATCCTTTGCA +
Preference number: 5 (lower is better)
Translates to: YQTPPSPSEGHRTSY*TLGATCAIWPPSFA
Trigger: TGCAAAGGATGGGGGCCAAATTGCACATGTAGCTCCCAGAGTCCAGTAGCTAGTCCTGTGTCCTTCAGAAGGCGAGGGTGGGGTTTGATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532042.5
CDS-3UTR CAA 90 bp CCAGCCCTCTGTACAGAGCTCCCCCATCCGGATCCCTTCTCACTGTACACAGCTATTTCACTAATCTCATaGATGGTGATCTGTGGCCTC +
Preference number: 5 (lower is better)
Translates to: PALCTELPHPDPFSLYTAISLIS*MVICGL
Trigger: GAGGCCACAGATCACCATCAATGAGATTAGTGAAAT...AGCTGTGTACAGTGAGAAGGGATCCGGATGGGGGAGCTCTGTACAGAGGGCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000534650.5
CDS-3UTR CAA 90 bp CCAGCCCTCTGTACAGAGCTCCCCCATCCGGATCCCTTCTCACTGTACACAGCTATGACATCCTCCTTCTaGATGCTGGTGATTTCACTA +
Preference number: 5 (lower is better)
Translates to: PALCTELPHPDPFSLYTAMTSSF*MLVISL
Trigger: TAGTGAAATCACCAGCATCAAGAAGGAGGATGTCAT...AGCTGTGTACAGTGAGAAGGGATCCGGATGGGGGAGCTCTGTACAGAGGGCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000533596.1
ENST00000534650.5
CDS GCA 90 bp CCTTGTTCTTACGTCCATCAATCTCAAAGAAGGAGATGGTGCCCTTaGGGTAAATCTCATTGCCTGGAGGATGTCGTAGGTCACACTTGG +
Preference number: 5 (lower is better)
Translates to: PCSYVHQSQRRRWCP*GKSHCLEDVVGHTW
Trigger: CCAAGTGTGACCTACGACATCCTCCAGGCAATGAGATTTACCGCAAGGGCACCATCTCCTTCTTTGAGATTGATGGACGTAAGAACAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527544.5
CDS GCA 90 bp GATGAACATAAGCAACATTTAAAAACACAGGTTGCCAAGGCAGGCTaGCTAGTTCCTATCATGGCCCTGCCACTTGGCAGTTCTATGCCC +
Preference number: 5 (lower is better)
Translates to: DEHKQHLKTQVAKAG*LVPIMALPLGSSMP
Trigger: GGGCATAGAACTGCCAAGTGGCAGGGCCATGATAGGAACTAGGCAGCCTGCCTTGGCAACCTGTGTTTTTAAATGTTGCTTATGTTCATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525600.1
CDS GCA 90 bp TCTTGTTCTTACGTCCATCAATCTCAAAGAAGGAGATGGTGCCCTTaGGGTAAATCTCATTGCCTGGAGGATGTCGTAGGTCACACTTGG +
Preference number: 5 (lower is better)
Translates to: SCSYVHQSQRRRWCP*GKSHCLEDVVGHTW
Trigger: CCAAGTGTGACCTACGACATCCTCCAGGCAATGAGATTTACCGCAAGGGCACCATCTCCTTCTTTGAGATTGATGGACGTAAGAACAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000534650.5
CDS CCA 72 bp CTCTGGGAGACGTCACTTCCGGGACCGAGCGCCCTGTaGGCCCGGGCCTCACGAAGCCCCTGTAGAGGGGGA +
Preference number: 6 (lower is better)
Translates to: LWETSLPGPSAL*ARASRSPCRGG
Trigger: TCCCCCTCTACAGGGGCTTCGTGAGGCCCGGGCCCACAGGGCGCTCGGTCCCGGAAGTGACGTCTCCCAGAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000352980.8
ENST00000377046.7
ENST00000532042.5
CDS CCA 72 bp AGCACGGGTAGGCGGCAGCCCTCGATTATCTCCCCCTaGGGAGACAGCGCGACGCCAGGGTCGGCACCTCCG +
Preference number: 6 (lower is better)
Translates to: STGRRQPSIISP*GDSATPGSAPP
Trigger: CGGAGGTGCCGACCCTGGCGTCGCGCTGTCTCCCCAGGGGGAGATAATCGAGGGCTGCCGCCTACCCGTGCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534104.5
CDS CCA 72 bp AGCACGGGTAGGCGGCAGCCCTCGATTATCTCCCCCTaGGGAGACAGCGCGACGCCAGGGTCGGCTACTGGG +
Preference number: 6 (lower is better)
Translates to: STGRRQPSIISP*GDSATPGSATG
Trigger: CCCAGTAGCCGACCCTGGCGTCGCGCTGTCTCCCCAGGGGGAGATAATCGAGGGCTGCCGCCTACCCGTGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341318.9
ENST00000530446.5
CDS CCA 72 bp AGGATCTCGGCCAGGGGCCACTCATCTTCGTTGTCCTaGTTCCGCCGCAGCACGGGTAGGCGGCAGCCCTCG +
Preference number: 6 (lower is better)
Translates to: RISARGHSSSLS*FRRSTGRRQPS
Trigger: CGAGGGCTGCCGCCTACCCGTGCTGCGGCGGAACCAGGACAACGAAGATGAGTGGCCCCTGGCCGAGATCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000530605.5
ENST00000532042.5
ENST00000534104.5
CDS CCA 72 bp GGGCAGGTTGAAGCGGAGTGTGATCTGGACCGGGATTaGCAAGGTCTTCCCGCTGGCCTGCGCCGAGGCCGG +
Preference number: 6 (lower is better)
Translates to: GQVEAECDLDRD*QGLPAGLRRGR
Trigger: CCGGCCTCGGCGCAGGCCAGCGGGAAGACCTTGCCAATCCCGGTCCAGATCACACTCCGCTTCAACCTGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000377046.7
ENST00000525204.1
ENST00000530605.5
ENST00000531880.1
CDS GCA 72 bp ATCTGGACCGGGATTGGCAAGGTCTTCCCGCTGGCCTaGGCCGAGGCCGGCACCTCTCTCTCTGGAGAGCCA +
Preference number: 6 (lower is better)
Translates to: IWTGIGKVFPLA*AEAGTSLSGEP
Trigger: TGGCTCTCCAGAGAGAGAGGTGCCGGCCTCGGCGCAGGCCAGCGGGAAGACCTTGCCAATCCCGGTCCAGAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341318.9
ENST00000377046.7
ENST00000525204.1
ENST00000531880.1
CDS CCA 72 bp GTTTCGTTGAGCGGTGGTTGGGCTGCAGGCAGGAGCTaGAGGAGAGCGGCTGGTCAGGCTCGCCACCGGGAA +
Preference number: 6 (lower is better)
Translates to: VSLSGGWAAGRS*RRAAGQARHRE
Trigger: TTCCCGGTGGCGAGCCTGACCAGCCGCTCTCCTCCAGCTCCTGCCTGCAGCCCAACCACCGCTCAACGAAAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000377046.7
ENST00000525204.1
ENST00000530605.5
ENST00000531880.1
CDS CAA 90 bp GAGAGCGGCTGGTCAGGCTCGCCACCGGGAATGGCCTCCCGCTCCTaGGGCAGGTTGAAGCGGAGTGTGATCTGGACCGGGATTGGCAAG +
Preference number: 6 (lower is better)
Translates to: ESGWSGSPPGMASRS*GRLKRSVIWTGIGK
Trigger: CTTGCCAATCCCGGTCCAGATCACACTCCGCTTCAACCTGCCCAAGGAGCGGGAGGCCATTCCCGGTGGCGAGCCTGACCAGCCGCTCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000377046.7
ENST00000525204.1
ENST00000530605.5
ENST00000531880.1
CDS GCA 72 bp ACCTCCACCTTCCGTTTCGTTGAGCGGTGGTTGGGCTaGAGGCAGGAGCTGGAGGAGAGCGGCTGGTCAGGC +
Preference number: 6 (lower is better)
Translates to: TSTFRFVERWLG*RQELEESGWSG
Trigger: GCCTGACCAGCCGCTCTCCTCCAGCTCCTGCCTGCAGCCCAACCACCGCTCAACGAAACGGAAGGTGGAGGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000377046.7
ENST00000525204.1
ENST00000530605.5
ENST00000531880.1
CDS CAA 72 bp GCGGGGTGGGCTATCAGCCCCAGTCCTGCTGCCGTCTaGGCACTGCAGTGGGCAGTGTCTGGTCACCACTTC +
Preference number: 6 (lower is better)
Translates to: AGWAISPSPAAV*ALQWAVSGHHF
Trigger: GAAGTGGTGACCAGACACTGCCCACTGCAGTGCCAAGACGGCAGCAGGACTGGGGCTGATAGCCCACCCCGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000533596.1
ENST00000534650.5
CDS TCA 72 bp GGTCCACTACCCCCTGGCCGCAGCACACATACTCACTaGACTCGATCAGCAGCTTGCCGTAGCCCCGGCGCT +
Preference number: 6 (lower is better)
Translates to: GPLPPGRSTHTH*TRSAACRSPGA
Trigger: AGCGCCGGGGCTACGGCAAGCTGCTGATCGAGTTCAGTGAGTATGTGTGCTGCGGCCAGGGGGTAGTGGACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533441.1
CDS TCA 72 bp ACAGGCCAGGCTATGAGACTCCACCCTTCCACGACCTaGACTCCACCCCCAGGCCGGATCCCTAAGCTCCAG +
Preference number: 6 (lower is better)
Translates to: TGQAMRLHPSTT*TPPPGRIPKLQ
Trigger: CTGGAGCTTAGGGATCCGGCCTGGGGGTGGAGTTCAGGTCGTGGAAGGGTGGAGTCTCATAGCCTGGCCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525204.1
ENST00000534650.5
CDS GCA 72 bp GCCTCAGGCCGAGCCCTAGGTGGAAACCCCATAACGTaGACAGCCAGTGGCGGTCTACTGAGTCCGTCACGT +
Preference number: 6 (lower is better)
Translates to: ASGRALGGNPIT*TASGGLLSPSR
Trigger: ACGTGACGGACTCAGTAGACCGCCACTGGCTGTGCACGTTATGGGGTTTCCACCTAGGGCTCGGCCTGAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352980.8
ENST00000377046.7
CDS CCA 72 bp TCCTGCTGCCGTCTTGGCACTGCAGTGGGCAGTGTCTaGTCACCACTTCCCCCTCTTGCTCCAGTCCTTGGG +
Preference number: 6 (lower is better)
Translates to: SCCRLGTAVGSV*SPLPPLAPVLG
Trigger: CCCAAGGACTGGAGCAAGAGGGGGAAGTGGTGACCAGACACTGCCCACTGCAGTGCCAAGACGGCAGCAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000533596.1
ENST00000534650.5
CDS CAA 90 bp CACTTCCCCCTCTTGCTCCAGTCCTTGGGAGTGAAGTGCAGACACTaGGAGTCGATCCGCAGGAGCCGCTTGAGCATGGCCCGCTCATGG +
Preference number: 6 (lower is better)
Translates to: HFPLLLQSLGVKCRH*ESIRRSRLSMARSW
Trigger: CCATGAGCGGGCCATGCTCAAGCGGCTCCTGCGGATCGACTCCAAGTGTCTGCACTTCACTCCCAAGGACTGGAGCAAGAGGGGGAAGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000533596.1
ENST00000534650.5
CDS CAA 90 bp CAGTGGGCAGTGTCTGGTCACCACTTCCCCCTCTTGCTCCAGTCCTaGGGAGTGAAGTGCAGACACTTGGAGTCGATCCGCAGGAGCCGC +
Preference number: 6 (lower is better)
Translates to: QWAVSGHHFPLLLQS*GVKCRHLESIRRSR
Trigger: GCGGCTCCTGCGGATCGACTCCAAGTGTCTGCACTTCACTCCCAAGGACTGGAGCAAGAGGGGGAAGTGGTGACCAGACACTGCCCACTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000533596.1
ENST00000534650.5
CDS TCA 72 bp AGTGCAGACACTTGGAGTCGATCCGCAGGAGCCGCTTaGGCATGGCCCGCTCATGGCCATCCACGATGTCCT +
Preference number: 6 (lower is better)
Translates to: SADTWSRSAGAA*AWPAHGHPRCP
Trigger: AGGACATCGTGGATGGCCATGAGCGGGCCATGCTCAAGCGGCTCCTGCGGATCGACTCCAAGTGTCTGCACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000533596.1
ENST00000534650.5
CDS CCA 72 bp TCGATCCGCAGGAGCCGCTTGAGCATGGCCCGCTCATaGCCATCCACGATGTCCTCTGACAGTGTGAGGATG +
Preference number: 6 (lower is better)
Translates to: SIRRSRLSMARS*PSTMSSDSVRM
Trigger: CATCCTCACACTGTCAGAGGACATCGTGGATGGCCATGAGCGGGCCATGCTCAAGCGGCTCCTGCGGATCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000533596.1
ENST00000534650.5
CDS CAA 72 bp AAACCGAGGCCGGGGCTGTCTCGCTGGGCACTGGAGTaGCTGGTGAAACCACCTCCACCTTCCGTTTCGTTG +
Preference number: 6 (lower is better)
Translates to: KPRPGLSRWALE*LVKPPPPSVSL
Trigger: CAACGAAACGGAAGGTGGAGGTGGTTTCACCAGCAACTCCAGTGCCCAGCGAGACAGCCCCGGCCTCGGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341318.9
ENST00000377046.7
ENST00000525204.1
ENST00000530605.5
ENST00000531880.1
CDS CAA 72 bp GTGAGTTCCTGTGGGTACGGGGAGAAGTACCACGGCTaGAGGCGGTGCCGGCCCAGCTCAATGCACTCAATG +
Preference number: 6 (lower is better)
Translates to: VSSCGYGEKYHG*RRCRPSSMHSM
Trigger: CATTGAGTGCATTGAGCTGGGCCGGCACCGCCTCAAGCCGTGGTACTTCTCCCCGTACCCACAGGAACTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000527544.5
ENST00000530446.5
ENST00000531880.1
ENST00000534650.5
ENST00000534681.1
CDS CAA 72 bp AAGTGCAGACACTTGGAGTCGATCCGCAGGAGCCGCTaGAGCATGGCCCGCTCATGGCCATCCACGATGTCC +
Preference number: 6 (lower is better)
Translates to: KCRHLESIRRSR*SMARSWPSTMS
Trigger: GGACATCGTGGATGGCCATGAGCGGGCCATGCTCAAGCGGCTCCTGCGGATCGACTCCAAGTGTCTGCACTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000533596.1
ENST00000534650.5
CDS CAA 72 bp AAACCGAGGCCGGGGCTGTCTCGCTGGGCACTGGAGTaGCTGGTGAAACCACCTCCACCTTCCGTTTCACCT +
Preference number: 6 (lower is better)
Translates to: KPRPGLSRWALE*LVKPPPPSVSP
Trigger: AGGTGAAACGGAAGGTGGAGGTGGTTTCACCAGCAACTCCAGTGCCCAGCGAGACAGCCCCGGCCTCGGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000352980.8
ENST00000527544.5
ENST00000528198.5
ENST00000530446.5
ENST00000534104.5
ENST00000534293.5
ENST00000534650.5
ENST00000534681.1
CDS TCA 72 bp GTCACCACTTCCCCCTCTTGCTCCAGTCCTTGGGAGTaGAGTGCAGACACTTGGAGTCGATCCGCAGGAGCC +
Preference number: 6 (lower is better)
Translates to: VTTSPSCSSPWE*SADTWSRSAGA
Trigger: GGCTCCTGCGGATCGACTCCAAGTGTCTGCACTTCACTCCCAAGGACTGGAGCAAGAGGGGGAAGTGGTGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000533596.1
ENST00000534650.5
CDS GCA 72 bp CACTTCCCCCTCTTGCTCCAGTCCTTGGGAGTGAAGTaGAGACACTTGGAGTCGATCCGCAGGAGCCGCTTG +
Preference number: 6 (lower is better)
Translates to: HFPLLLQSLGVK*RHLESIRRSRL
Trigger: CAAGCGGCTCCTGCGGATCGACTCCAAGTGTCTGCACTTCACTCCCAAGGACTGGAGCAAGAGGGGGAAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000533596.1
ENST00000534650.5
CDS GCA 72 bp AGTGCCTCCCTGCTCAGTCAGGCAAGTTTCCCGCCTTaGTCCGCACACCTCCATTCTAAGCCTGACCAGGAG +
Preference number: 6 (lower is better)
Translates to: SASLLSQASFPP*SAHLHSKPDQE
Trigger: CTCCTGGTCAGGCTTAGAATGGAGGTGTGCGGAGCAAGGCGGGAAACTTGCCTGACTGAGCAGGGAGGCACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533441.1
CDS GCA 72 bp CTGACCCACTCCACCAGCCCGCAGCTTAGGCAGGGCTaGTCCTCAGTGTTGAAAAGCCTGTGTGCCAGATGT +
Preference number: 6 (lower is better)
Translates to: LTHSTSPQLRQG*SSVLKSLCARC
Trigger: ACATCTGGCACACAGGCTTTTCAACACTGAGGAGCAGCCCTGCCTAAGCTGCGGGCTGGTGGAGTGGGTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533441.1
CDS CCA 72 bp GCACAGGTAGAGGACAGGCAATGTGGTGAGTTCCTGTaGGTACGGGGAGAAGTACCACGGCTTGAGGCGGTG +
Preference number: 6 (lower is better)
Translates to: AQVEDRQCGEFL*VRGEVPRLEAV
Trigger: CACCGCCTCAAGCCGTGGTACTTCTCCCCGTACCCACAGGAACTCACCACATTGCCTGTCCTCTACCTGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000527544.5
ENST00000530446.5
ENST00000531880.1
ENST00000534650.5
CDS CCA 72 bp TCACCACTCTGGGTATCCCGCCTTGAGCCTGGCCAGTaGTTCAGGGTCAACCAGGAGCTTCACTGTTCGTGC +
Preference number: 6 (lower is better)
Translates to: SPLWVSRLEPGQ*FRVNQELHCSC
Trigger: GCACGAACAGTGAAGCTCCTGGTTGACCCTGAACCACTGGCCAGGCTCAAGGCGGGATACCCAGAGTGGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533441.1
CDS CAA 72 bp CTCTTGCTCCAGTCCTTGGGAGTGAAGTGCAGACACTaGGAGTCGATCCGCAGGAGCCGCTTGAGCATGGCC +
Preference number: 6 (lower is better)
Translates to: LLLQSLGVKCRH*ESIRRSRLSMA
Trigger: GGCCATGCTCAAGCGGCTCCTGCGGATCGACTCCAAGTGTCTGCACTTCACTCCCAAGGACTGGAGCAAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000533596.1
ENST00000534650.5
CDS CAA 90 bp GGAGAGCCAGGACGGGACCCAGGAAGTCCGTTCTTAGTGGGGGTCTaGGCCTCTTTCTTGGGGAACTGGATCTTCTTTAGGTCCAGCCGC +
Preference number: 6 (lower is better)
Translates to: GEPGRDPGSPFLVGV*ASFLGNWIFFRSSR
Trigger: GCGGCTGGACCTAAAGAAGATCCAGTTCCCCAAGAAAGAGGCCAAGACCCCCACTAAGAACGGACTTCCTGGGTCCCGTCCTGGCTCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 14 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000525204.1
ENST00000527544.5
ENST00000528198.5
ENST00000530446.5
ENST00000530605.5
ENST00000531880.1
ENST00000532042.5
ENST00000534104.5
ENST00000534293.5
ENST00000534650.5
ENST00000534681.1
CDS CAA 90 bp TTGGGAGTGAAGTGCAGACACTTGGAGTCGATCCGCAGGAGCCGCTaGAGCATGGCCCGCTCATGGCCATCCACGATGTCCTCTGACAGT +
Preference number: 6 (lower is better)
Translates to: LGVKCRHLESIRRSR*SMARSWPSTMSSDS
Trigger: ACTGTCAGAGGACATCGTGGATGGCCATGAGCGGGCCATGCTCAAGCGGCTCCTGCGGATCGACTCCAAGTGTCTGCACTTCACTCCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000533596.1
ENST00000534650.5
CDS CAA 90 bp ACCCACTCCACCAGCCCGCAGCTTAGGCAGGGCTGCTCCTCAGTGTaGAAAAGCCTGTGTGCCAGATGTGTGATGGTGTCTGAGTGCCTC +
Preference number: 6 (lower is better)
Translates to: THSTSPQLRQGCSSV*KSLCARCVMVSECL
Trigger: GAGGCACTCAGACACCATCACACATCTGGCACACAGGCTTTTCAACACTGAGGAGCAGCCCTGCCTAAGCTGCGGGCTGGTGGAGTGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533441.1
CDS CAA 90 bp CGGGACCCAGGAAGTCCGTTCTTAGTGGGGGTCTTGGCCTCTTTCTaGGGGAACTGGATCTTCTTTAGGTCCAGCCGCTCATGCGTCACC +
Preference number: 6 (lower is better)
Translates to: RDPGSPFLVGVLASF*GNWIFFRSSRSCVT
Trigger: GGTGACGCATGAGCGGCTGGACCTAAAGAAGATCCAGTTCCCCAAGAAAGAGGCCAAGACCCCCACTAAGAACGGACTTCCTGGGTCCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 14 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000525204.1
ENST00000527544.5
ENST00000528198.5
ENST00000530446.5
ENST00000530605.5
ENST00000531880.1
ENST00000532042.5
ENST00000534104.5
ENST00000534293.5
ENST00000534650.5
ENST00000534681.1
CDS CAA 90 bp GGCAATGTGGTGAGTTCCTGTGGGTACGGGGAGAAGTACCACGGCTaGAGGCGGTGCCGGCCCAGCTCAATGCACTCAATGTTCTTCATC +
Preference number: 6 (lower is better)
Translates to: GNVVSSCGYGEKYHG*RRCRPSSMHSMFFI
Trigger: GATGAAGAACATTGAGTGCATTGAGCTGGGCCGGCACCGCCTCAAGCCGTGGTACTTCTCCCCGTACCCACAGGAACTCACCACATTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000527544.5
ENST00000530446.5
ENST00000531880.1
ENST00000534650.5
CDS CAA 90 bp GTCTTGGCACTGCAGTGGGCAGTGTCTGGTCACCACTTCCCCCTCTaGCTCCAGTCCTTGGGAGTGAAGTGCAGACACTTGGAGTCGATC +
Preference number: 6 (lower is better)
Translates to: VLALQWAVSGHHFPL*LQSLGVKCRHLESI
Trigger: GATCGACTCCAAGTGTCTGCACTTCACTCCCAAGGACTGGAGCAAGAGGGGGAAGTGGTGACCAGACACTGCCCACTGCAGTGCCAAGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000533596.1
ENST00000534650.5
CDS TCA 72 bp TCGATCAGACACCAGGCTGCCAGTCATGCGTGGTGCTaGCGGTATTCCATCAGAGCTGTCCTGGGAGTCCTC +
Preference number: 6 (lower is better)
Translates to: SIRHQAASHAWC*RYSIRAVLGVL
Trigger: GAGGACTCCCAGGACAGCTCTGATGGAATACCGTCAGCACCACGCATGACTGGCAGCCTGGTGTCTGATCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000527544.5
ENST00000528198.5
ENST00000530446.5
ENST00000531880.1
ENST00000534104.5
ENST00000534650.5
ENST00000534681.1
CDS TCA 72 bp GGCAGAACTCGCACAGGTAGAGGACAGGCAATGTGGTaGGTTCCTGTGGGTACGGGGAGAAGTACCACGGCT +
Preference number: 6 (lower is better)
Translates to: GRTRTGRGQAMW*VPVGTGRSTTA
Trigger: AGCCGTGGTACTTCTCCCCGTACCCACAGGAACTCACCACATTGCCTGTCCTCTACCTGTGCGAGTTCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000527544.5
ENST00000530446.5
ENST00000531880.1
ENST00000534650.5
CDS GCA 72 bp CAAACAATTCGATTTTCGCTTCCGTCCTGGCTGGGCTaGCACTGCCCTACGGGCGGCTCCATTCTGGGGAAA +
Preference number: 6 (lower is better)
Translates to: QTIRFSLPSWLG*HCPTGGSILGK
Trigger: TTTCCCCAGAATGGAGCCGCCCGTAGGGCAGTGGCAGCCCAGCCAGGACGGAAGCGAAAATCGAATTGTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000527544.5
ENST00000528198.5
ENST00000530446.5
ENST00000531880.1
ENST00000534104.5
ENST00000534293.5
ENST00000534650.5
ENST00000534681.1
CDS GCA 72 bp TGTGGGTACGGGGAGAAGTACCACGGCTTGAGGCGGTaGCGGCCCAGCTCAATGCACTCAATGTTCTTCATC +
Preference number: 6 (lower is better)
Translates to: CGYGEKYHGLRR*RPSSMHSMFFI
Trigger: GATGAAGAACATTGAGTGCATTGAGCTGGGCCGGCACCGCCTCAAGCCGTGGTACTTCTCCCCGTACCCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000527544.5
ENST00000530446.5
ENST00000531880.1
ENST00000534650.5
ENST00000534681.1
CDS CCA 72 bp ATCAGTGCCCAAACAATTCGATTTTCGCTTCCGTCCTaGCTGGGCTGCCACTGCCCTACGGGCGGCTCCATT +
Preference number: 6 (lower is better)
Translates to: ISAQTIRFSLPS*LGCHCPTGGSI
Trigger: AATGGAGCCGCCCGTAGGGCAGTGGCAGCCCAGCCAGGACGGAAGCGAAAATCGAATTGTTTGGGCACTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000527544.5
ENST00000528198.5
ENST00000530446.5
ENST00000531880.1
ENST00000534104.5
ENST00000534293.5
ENST00000534650.5
ENST00000534681.1
CDS CCA 72 bp AAACGGAGTGTTACAAGCCTCAGGCCGAGCCCTAGGTaGAAACCCCATAACGTGCACAGCCAGTGGCGGTCT +
Preference number: 6 (lower is better)
Translates to: KRSVTSLRPSPR*KPHNVHSQWRS
Trigger: AGACCGCCACTGGCTGTGCACGTTATGGGGTTTCCACCTAGGGCTCGGCCTGAGGCTTGTAACACTCCGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352980.8
ENST00000377046.7
CDS CCA 72 bp GGCAGGCTGCCTAGTTCCTATCATGGCCCTGCCACTTaGCAGTTCTATGCCCTCCACTTCTCTGTGCCTCAG +
Preference number: 6 (lower is better)
Translates to: GRLPSSYHGPAT*QFYALHFSVPQ
Trigger: CTGAGGCACAGAGAAGTGGAGGGCATAGAACTGCCAAGTGGCAGGGCCATGATAGGAACTAGGCAGCCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525600.1
CDS CAA 72 bp CTGCAGTGGGCAGTGTCTGGTCACCACTTCCCCCTCTaGCTCCAGTCCTTGGGAGTGAAGTGCAGACACTTG +
Preference number: 6 (lower is better)
Translates to: LQWAVSGHHFPL*LQSLGVKCRHL
Trigger: CAAGTGTCTGCACTTCACTCCCAAGGACTGGAGCAAGAGGGGGAAGTGGTGACCAGACACTGCCCACTGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000533596.1
ENST00000534650.5
CDS CAA 72 bp AGAGAAAAGGCTTGTCACCACTCTGGGTATCCCGCCTaGAGCCTGGCCAGTGGTTCAGGGTCAACCAGGAGC +
Preference number: 6 (lower is better)
Translates to: REKACHHSGYPA*SLASGSGSTRS
Trigger: GCTCCTGGTTGACCCTGAACCACTGGCCAGGCTCAAGGCGGGATACCCAGAGTGGTGACAAGCCTTTTCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533441.1
CDS TCA 72 bp GGCCCAGCTCAATGCACTCAATGTTCTTCATCCGGGTaGCGATGTCGTCGTGGCTTCGATCAGACACCAGGC +
Preference number: 6 (lower is better)
Translates to: GPAQCTQCSSSG*RCRRGFDQTPG
Trigger: GCCTGGTGTCTGATCGAAGCCACGACGACATCGTCACCCGGATGAAGAACATTGAGTGCATTGAGCTGGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000527544.5
ENST00000528198.5
ENST00000530446.5
ENST00000531880.1
ENST00000534650.5
ENST00000534681.1
CDS TCA 72 bp AATAGCATAGACAGGGGCCTTAGACAGGCCAGGCTATaGGACTCCACCCTTCCACGACCTGAACTCCACCCC +
Preference number: 6 (lower is better)
Translates to: NSIDRGLRQARL*DSTLPRPELHP
Trigger: GGGGTGGAGTTCAGGTCGTGGAAGGGTGGAGTCTCATAGCCTGGCCTGTCTAAGGCCCCTGTCTATGCTATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525204.1
ENST00000534650.5
CDS TCA 72 bp GCTACATGTGCAATTTGGCCCCCATCCTTTGCAAGATaGAGTCAGGGTGAGAGGGAGCCGCCTCCTGCCCAT +
Preference number: 6 (lower is better)
Translates to: ATCAIWPPSFAR*SQGEREPPPAH
Trigger: ATGGGCAGGAGGCGGCTCCCTCTCACCCTGACTTCATCTTGCAAAGGATGGGGGCCAAATTGCACATGTAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532042.5
CDS CCA 72 bp CCACCCTCGCCTTCTGAAGGACACAGGACTAGCTACTaGACTCTGGGAGCTACATGTGCAATTTGGCCCCCA +
Preference number: 6 (lower is better)
Translates to: PPSPSEGHRTSY*TLGATCAIWPP
Trigger: TGGGGGCCAAATTGCACATGTAGCTCCCAGAGTCCAGTAGCTAGTCCTGTGTCCTTCAGAAGGCGAGGGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532042.5
CDS CAA 72 bp CTCTGGGAGCTACATGTGCAATTTGGCCCCCATCCTTaGCAAGATGAAGTCAGGGTGAGAGGGAGCCGCCTC +
Preference number: 6 (lower is better)
Translates to: LWELHVQFGPHP*QDEVRVRGSRL
Trigger: GAGGCGGCTCCCTCTCACCCTGACTTCATCTTGCAAAGGATGGGGGCCAAATTGCACATGTAGCTCCCAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532042.5
CDS CAA 72 bp ACCAGCCCGCAGCTTAGGCAGGGCTGCTCCTCAGTGTaGAAAAGCCTGTGTGCCAGATGTGTGATGGTGTCT +
Preference number: 6 (lower is better)
Translates to: TSPQLRQGCSSV*KSLCARCVMVS
Trigger: AGACACCATCACACATCTGGCACACAGGCTTTTCAACACTGAGGAGCAGCCCTGCCTAAGCTGCGGGCTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533441.1
CDS TCA 72 bp GAGCATGGCCCGCTCATGGCCATCCACGATGTCCTCTaGCAGTGTGAGGATGTACTGGCCCTTGTAGTAGTT +
Preference number: 6 (lower is better)
Translates to: EHGPLMAIHDVL*QCEDVLALVVV
Trigger: AACTACTACAAGGGCCAGTACATCCTCACACTGTCAGAGGACATCGTGGATGGCCATGAGCGGGCCATGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000533596.1
ENST00000534650.5
CDS TCA 72 bp GTTGAAAAGCCTGTGTGCCAGATGTGTGATGGTGTCTaGGTGCCTCCCTGCTCAGTCAGGCAAGTTTCCCGC +
Preference number: 6 (lower is better)
Translates to: VEKPVCQMCDGV*VPPCSVRQVSR
Trigger: GCGGGAAACTTGCCTGACTGAGCAGGGAGGCACTCAGACACCATCACACATCTGGCACACAGGCTTTTCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533441.1
CDS GCA 72 bp GTTCAGGGTCAACCAGGAGCTTCACTGTTCGTGCTATaGCCCAGGCTGCTAGGTGATGAGTGTTCTTCCCTG +
Preference number: 6 (lower is better)
Translates to: VQGQPGASLFVL*PRLLGDECSSL
Trigger: CAGGGAAGAACACTCATCACCTAGCAGCCTGGGGCATAGCACGAACAGTGAAGCTCCTGGTTGACCCTGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533441.1
CDS CCA 72 bp CACTCAATGTTCTTCATCCGGGTGACGATGTCGTCGTaGCTTCGATCAGACACCAGGCTGCCAGTCATGCGT +
Preference number: 6 (lower is better)
Translates to: HSMFFIRVTMSS*LRSDTRLPVMR
Trigger: ACGCATGACTGGCAGCCTGGTGTCTGATCGAAGCCACGACGACATCGTCACCCGGATGAAGAACATTGAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000527544.5
ENST00000528198.5
ENST00000530446.5
ENST00000531880.1
ENST00000534650.5
ENST00000534681.1
CDS CAA 72 bp GGACGGGACCCAGGAAGTCCGTTCTTAGTGGGGGTCTaGGCCTCTTTCTTGGGGAACTGGATCTTCTTTAGG +
Preference number: 6 (lower is better)
Translates to: GRDPGSPFLVGV*ASFLGNWIFFR
Trigger: CCTAAAGAAGATCCAGTTCCCCAAGAAAGAGGCCAAGACCCCCACTAAGAACGGACTTCCTGGGTCCCGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 14 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000525204.1
ENST00000527544.5
ENST00000528198.5
ENST00000530446.5
ENST00000530605.5
ENST00000531880.1
ENST00000532042.5
ENST00000534104.5
ENST00000534293.5
ENST00000534650.5
ENST00000534681.1
CDS CAA 72 bp TCCAGCCGCTCATGCGTCACCCATTCATCCAGACGTTaGTTGACTGTAGCAGTGGGGATGGCTCAGGACAGA +
Preference number: 6 (lower is better)
Translates to: SSRSCVTHSSRR*LTVAVGMAQDR
Trigger: TCTGTCCTGAGCCATCCCCACTGCTACAGTCAACAAACGTCTGGATGAATGGGTGACGCATGAGCGGCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534681.1
CDS CAA 90 bp AACTCTGCAAGAGAAAAGGCTTGTCACCACTCTGGGTATCCCGCCTaGAGCCTGGCCAGTGGTTCAGGGTCAACCAGGAGCTTCACTGTT +
Preference number: 6 (lower is better)
Translates to: NSAREKACHHSGYPA*SLASGSGSTRSFTV
Trigger: AACAGTGAAGCTCCTGGTTGACCCTGAACCACTGGCCAGGCTCAAGGCGGGATACCCAGAGTGGTGACAAGCCTTTTCTCTTGCAGAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533441.1
CDS CCA 72 bp TTCTTAGTGGGGGTCTTGGCCTCTTTCTTGGGGAACTaGATCTTCTTTAGGTCCAGCCGCTCATGCGTCACC +
Preference number: 6 (lower is better)
Translates to: FLVGVLASFLGN*IFFRSSRSCVT
Trigger: GGTGACGCATGAGCGGCTGGACCTAAAGAAGATCCAGTTCCCCAAGAAAGAGGCCAAGACCCCCACTAAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 14 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000525204.1
ENST00000527544.5
ENST00000528198.5
ENST00000530446.5
ENST00000530605.5
ENST00000531880.1
ENST00000532042.5
ENST00000534104.5
ENST00000534293.5
ENST00000534650.5
ENST00000534681.1
CDS CAA 72 bp GGAAGTCCGTTCTTAGTGGGGGTCTTGGCCTCTTTCTaGGGGAACTGGATCTTCTTTAGGTCCAGCCGCTCA +
Preference number: 6 (lower is better)
Translates to: GSPFLVGVLASF*GNWIFFRSSRS
Trigger: TGAGCGGCTGGACCTAAAGAAGATCCAGTTCCCCAAGAAAGAGGCCAAGACCCCCACTAAGAACGGACTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 14 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000525204.1
ENST00000527544.5
ENST00000528198.5
ENST00000530446.5
ENST00000530605.5
ENST00000531880.1
ENST00000532042.5
ENST00000534104.5
ENST00000534293.5
ENST00000534650.5
ENST00000534681.1
CDS CAA 72 bp AGCCGCTCATGCGTCACCCATTCATCCAGACGTTTGTaGACTGTAGCAGTGGGGATGGCTCAGGACAGAATG +
Preference number: 6 (lower is better)
Translates to: SRSCVTHSSRRL*TVAVGMAQDRM
Trigger: CATTCTGTCCTGAGCCATCCCCACTGCTACAGTCAACAAACGTCTGGATGAATGGGTGACGCATGAGCGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534681.1
CDS CAA 90 bp TTTAGGTCCAGCCGCTCATGCGTCACCCATTCATCCAGACGTTTGTaGACTGTAGCAGTGGGGATGGCTCAGGACAGAATGCCAAAGACT +
Preference number: 6 (lower is better)
Translates to: FRSSRSCVTHSSRRL*TVAVGMAQDRMPKT
Trigger: AGTCTTTGGCATTCTGTCCTGAGCCATCCCCACTGCTACAGTCAACAAACGTCTGGATGAATGGGTGACGCATGAGCGGCTGGACCTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534681.1
CDS CAA 90 bp TTCTTTAGGTCCAGCCGCTCATGCGTCACCCATTCATCCAGACGTTaGTTGACTGTAGCAGTGGGGATGGCTCAGGACAGAATGCCAAAG +
Preference number: 6 (lower is better)
Translates to: FFRSSRSCVTHSSRR*LTVAVGMAQDRMPK
Trigger: CTTTGGCATTCTGTCCTGAGCCATCCCCACTGCTACAGTCAACAAACGTCTGGATGAATGGGTGACGCATGAGCGGCTGGACCTAAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534681.1
CDS GCA 72 bp TTGGGGAACTGGATCTTCTTTAGGTCCAGCCGCTCATaGGTCACCCATTCATCCAGACGTTTGTTGAAGTCA +
Preference number: 6 (lower is better)
Translates to: LGNWIFFRSSRS*VTHSSRRLLKS
Trigger: TGACTTCAACAAACGTCTGGATGAATGGGTGACGCATGAGCGGCTGGACCTAAAGAAGATCCAGTTCCCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000525204.1
ENST00000527544.5
ENST00000528198.5
ENST00000530446.5
ENST00000530605.5
ENST00000531880.1
ENST00000532042.5
ENST00000534104.5
ENST00000534293.5
ENST00000534650.5
CDS GCA 72 bp AAGCAACATTTAAAAACACAGGTTGCCAAGGCAGGCTaGCTAGTTCCTATCATGGCCCTGCCACTTGGCAGT +
Preference number: 6 (lower is better)
Translates to: KQHLKTQVAKAG*LVPIMALPLGS
Trigger: ACTGCCAAGTGGCAGGGCCATGATAGGAACTAGGCAGCCTGCCTTGGCAACCTGTGTTTTTAAATGTTGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525600.1
CDS GCA 72 bp TTGGGGAACTGGATCTTCTTTAGGTCCAGCCGCTCATaGGTCACCCATTCATCCAGACGTTTGTTGACTGTA +
Preference number: 6 (lower is better)
Translates to: LGNWIFFRSSRS*VTHSSRRLLTV
Trigger: TACAGTCAACAAACGTCTGGATGAATGGGTGACGCATGAGCGGCTGGACCTAAAGAAGATCCAGTTCCCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534681.1
CDS CAA 90 bp TTGATGAGATTGAGGTACTGCAGAGTGGAGATGACATCCTCCTTCTaGATGCTGGTGATTTCACTAATCTCACCCCAGGTAGACAGCGCC +
Preference number: 6 (lower is better)
Translates to: LMRLRYCRVEMTSSF*MLVISLISPQVDSA
Trigger: GGCGCTGTCTACCTGGGGTGAGATTAGTGAAATCACCAGCATCAAGAAGGAGGATGTCATCTCCACTCTGCAGTACCTCAATCTCATCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533596.1
CDS TCA 72 bp CCACGATGTGGAAGCCCTTACAGTCATACTCTGTCATaGCGTAGAAGAGGAAAGGGTCTGTGTCATAGTACA +
Preference number: 6 (lower is better)
Translates to: PRCGSPYSHTLS*RRRGKGLCHST
Trigger: TGTACTATGACACAGACCCTTTCCTCTTCTACGTCATGACAGAGTATGACTGTAAGGGCTTCCACATCGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000530446.5
ENST00000533441.1
ENST00000534650.5
CDS CAA 72 bp TTGAGGTACTGCAGAGTGGAGATGACATCCTCCTTCTaGATGCTGGTGATTTCACTAATCTCACCCCAGGTA +
Preference number: 6 (lower is better)
Translates to: LRYCRVEMTSSF*MLVISLISPQV
Trigger: TACCTGGGGTGAGATTAGTGAAATCACCAGCATCAAGAAGGAGGATGTCATCTCCACTCTGCAGTACCTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533596.1
CDS CAA 90 bp TTGATGAGATTGAGGTACTGCAGAGTGGAGATGACATCCTCCTTCTaGATGCTGGTGATTTCACTAATCTCATTGATGGTGATCTGTGGC +
Preference number: 6 (lower is better)
Translates to: LMRLRYCRVEMTSSF*MLVISLISLMVICG
Trigger: GCCACAGATCACCATCAATGAGATTAGTGAAATCACCAGCATCAAGAAGGAGGATGTCATCTCCACTCTGCAGTACCTCAATCTCATCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000525600.1
ENST00000530446.5
ENST00000534650.5
CDS CAA 72 bp TTGAGGTACTGCAGAGTGGAGATGACATCCTCCTTCTaGATGCTGGTGATTTCACTAATCTCATTGATGGTG +
Preference number: 6 (lower is better)
Translates to: LRYCRVEMTSSF*MLVISLISLMV
Trigger: CACCATCAATGAGATTAGTGAAATCACCAGCATCAAGAAGGAGGATGTCATCTCCACTCTGCAGTACCTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341318.9
ENST00000352980.8
ENST00000377046.7
ENST00000525600.1
ENST00000530446.5
ENST00000534650.5