RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KASH5 (Homo sapiens)

Ensembl gene IDs: ENSG00000161609

Ensembl transcript IDs: ENST00000447857.8, ENST00000593362.1, ENST00000593631.1, ENST00000593725.5, ENST00000594043.5, ENST00000594905.5, ENST00000595828.5, ENST00000596130.5, ENST00000596419.1, ENST00000596771.5, ENST00000596862.5, ENST00000597993.5, ENST00000598730.5, ENST00000600570.1, ENST00000600895.1

Found 320 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGAGTTGAGTATTTGCTCCTCCAAGCTGACCGGCATTCCCAGCCTTaGCTCCTCAGGCCGCTCCCGGAGGTACACTGGGGCAATGGACTC +
Preference number: 1 (lower is better)
Translates to: GVEYLLLQADRHSQP*LLRPLPEVHWGNGL
Trigger: GAGTCCATTGCCCCAGTGTACCTCCGGGAGCGGCCTGAGGAGGCAAGGCTGGGAATGCCGGTCAGCTTGGAGGAGCAAATACTCAACTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597993.5
3UTR CCA 90 bp CGGCATTCCCAGCCTTGCCTCCTCAGGCCGCTCCCGGAGGTACACTaGGGCAATGGACTCAACTTCTCTTGGGCCTCAGTTTCTTCCTCT +
Preference number: 1 (lower is better)
Translates to: RHSQPCLLRPLPEVH*GNGLNFSWASVSSS
Trigger: AGAGGAAGAAACTGAGGCCCAAGAGAAGTTGAGTCCATTGCCCCAGTGTACCTCCGGGAGCGGCCTGAGGAGGCAAGGCTGGGAATGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597993.5
3UTR TCA 90 bp TCTCTTTATAAAAAGGAAGGAAGAAATTTCCGTTTCCCGCAGATGTaGTGTAGGAAGCTACAACTGCCAACTCCTGAGCATGAGGGAGGG +
Preference number: 1 (lower is better)
Translates to: SLYKKEGRNFRFPQM*CRKLQLPTPEHEGG
Trigger: CCCTCCCTCATGCTCAGGAGTTGGCAGTTGTAGCTTCCTACATCACATCTGCGGGAAACGGAAATTTCTTCCTTCCTTTTTATAAAGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
3UTR-3UTR CCA 90 bp TCCTCCAAGCTGACCGGCATTCCCAGCCTTGCCTCCTCAGGCCGCTCCCGGAGGGGACTCAACTTCTCTTaGGCCTCAGTTTCTTCCTCT +
Preference number: 2 (lower is better)
Translates to: SSKLTGIPSLASSGRSRRGLNFS*ASVSSS
Trigger: AGAGGAAGAAACTGAGGCCCAAGAGAAGTTGAGTCC...CCTCCGGGAGCGGCCTGAGGAGGCAAGGCTGGGAATGCCGGTCAGCTTGGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597993.5
3UTR-3UTR CCA 90 bp AGGAGAATCACTGAGGCCCTGACCCCAAGGCAACCGAGACTTAGCTGTGTGCCCCAATGGGGATCCCAGTaGAGAGAGGGCCAGGGGATT +
Preference number: 2 (lower is better)
Translates to: RRITEALTPRQPRLSCVPQWGSQ*REGQGI
Trigger: AATCCCCTGGCCCTCTCTCCACTGGGATCCCCATTG...GGGCACACAGCTAAGTCTCGGTTGCCTTGGGGTCAGGGCCTCAGTGATTCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
3UTR CAA 90 bp GCCTGTCCTCTGAGGGTCACAAGCTTCGAACGTGGAGTTGAGTATTaGCTCCTCCAAGCTGACCGGCATTCCCAGCCTTGCCTCCTCAGG +
Preference number: 2 (lower is better)
Translates to: ACPLRVTSFERGVEY*LLQADRHSQPCLLR
Trigger: CCTGAGGAGGCAAGGCTGGGAATGCCGGTCAGCTTGGAGGAGCAAATACTCAACTCCACGTTCGAAGCTTGTGACCCTCAGAGGACAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597993.5
3UTR-3UTR CCA 90 bp GAACGTGGAGTTGAGTATTTGCTCCTCCAAGCTGACCGGCATTCCCAGCCTTGCGGTACACTGGGGCAATaGACTCAACTTCTCTTGGGC +
Preference number: 2 (lower is better)
Translates to: ERGVEYLLLQADRHSQPCGTLGQ*TQLLLG
Trigger: GCCCAAGAGAAGTTGAGTCCATTGCCCCAGTGTACC...GCAAGGCTGGGAATGCCGGTCAGCTTGGAGGAGCAAATACTCAACTCCACGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597993.5
3UTR-3UTR GCA 90 bp GAAATTTCCGTTTCCCGCAGATGTGATGTAGGAAGCTACAACTGCCAACTCCTGCGAGACTTAGCTGTGTaGCCACAGCTGCCCTCGCCA +
Preference number: 2 (lower is better)
Translates to: EISVSRRCDVGSYNCQLLRDLAV*PQLPSP
Trigger: TGGCGAGGGCAGCTGTGGGCACACAGCTAAGTCTCG...CAGGAGTTGGCAGTTGTAGCTTCCTACATCACATCTGCGGGAAACGGAAATTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
3UTR-3UTR CCA 90 bp CCTCCTCAGGCCGCTCCCGGAGGTACACTGGGGCAATGGACTCAACTTCTCTTGTCTTCCTCTGGAAAATaGGGTTGGTGTTACCTCTTT +
Preference number: 2 (lower is better)
Translates to: PPQAAPGGTLGQWTQLLLSSSGK*GWCYLF
Trigger: AAAGAGGTAACACCAACCCCATTTTCCAGAGGAAGA...CAAGAGAAGTTGAGTCCATTGCCCCAGTGTACCTCCGGGAGCGGCCTGAGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597993.5
3UTR-3UTR TCA 90 bp TTTGAATCTACCCACTGCACACTGAGGCTACTGCCTCTCTTTATAAAAAGGAAGGAATCACTGAGGCCCTaGCCCCAAGGCAACCGAGAC +
Preference number: 2 (lower is better)
Translates to: FESTHCTLRLLPLFIKRKESLRP*PQGNRD
Trigger: GTCTCGGTTGCCTTGGGGTCAGGGCCTCAGTGATTC...CTTCCTTTTTATAAAGAGAGGCAGTAGCCTCAGTGTGCAGTGGGTAGATTCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
3UTR-3UTR TCA 90 bp ATAAAAAGGAAGGAAGAAATTTCCGTTTCCCGCAGATGTGATGTAGGAAGCTACGAATCACTGAGGCCCTaGCCCCAAGGCAACCGAGAC +
Preference number: 2 (lower is better)
Translates to: IKRKEEISVSRRCDVGSYESLRP*PQGNRD
Trigger: GTCTCGGTTGCCTTGGGGTCAGGGCCTCAGTGATTC...GTAGCTTCCTACATCACATCTGCGGGAAACGGAAATTTCTTCCTTCCTTTTTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
3UTR-3UTR GCA 90 bp AGGCAACTGCTTCTCTTTTATTATGAATATGATTTGAATCTACCCACTGCACACCGAGACTTAGCTGTGTaGCCACAGCTGCCCTCGCCA +
Preference number: 2 (lower is better)
Translates to: RQLLLFYYEYDLNLPTAHRDLAV*PQLPSP
Trigger: TGGCGAGGGCAGCTGTGGGCACACAGCTAAGTCTCG...GTGTGCAGTGGGTAGATTCAAATCATATTCATAATAAAAGAGAAGCAGTTGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
3UTR-3UTR CCA 90 bp TTTGAATCTACCCACTGCACACTGAGGCTACTGCCTCTCTTTATAAAAAGGAAGAAGCCTGCGCAACAGTaGACTAACAATGGGGATCCC +
Preference number: 2 (lower is better)
Translates to: FESTHCTLRLLPLFIKRKKPAQQ*TNNGDP
Trigger: GGGATCCCCATTGTTAGTCCACTGTTGCGCAGGCTT...CTTCCTTTTTATAAAGAGAGGCAGTAGCCTCAGTGTGCAGTGGGTAGATTCAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
3UTR-3UTR TCA 90 bp ATAAAAAGGAAGGAAGAAATTTCCGTTTCCCGCAGATGTGATGTAGGAAGCTACGGCCAGGGGATTTATTaGGCTAGACACTGCTCTGAG +
Preference number: 2 (lower is better)
Translates to: IKRKEEISVSRRCDVGSYGQGIY*ARHCSE
Trigger: CTCAGAGCAGTGTCTAGCTCAATAAATCCCCTGGCC...GTAGCTTCCTACATCACATCTGCGGGAAACGGAAATTTCTTCCTTCCTTTTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
3UTR-3UTR CCA 90 bp TTTGAATCTACCCACTGCACACTGAGGCTACTGCCTCTCTTTATAAAAAGGAAGAAAAATACAGGGATGTaGATCCCCTGTACTCTATCT +
Preference number: 2 (lower is better)
Translates to: FESTHCTLRLLPLFIKRKKNTGM*IPCTLS
Trigger: AGATAGAGTACAGGGGATCCACATCCCTGTATTTTT...CTTCCTTTTTATAAAGAGAGGCAGTAGCCTCAGTGTGCAGTGGGTAGATTCAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
3UTR-3UTR CCA 90 bp AGGCAACTGCTTCTCTTTTATTATGAATATGATTTGAATCTACCCACTGCACACTGCTTAATCCATTACTaGGGGAGTTTTGCTATTGTT +
Preference number: 2 (lower is better)
Translates to: RQLLLFYYEYDLNLPTAHCLIHY*GSFAIV
Trigger: AACAATAGCAAAACTCCCCCAGTAATGGATTAAGCA...GTGTGCAGTGGGTAGATTCAAATCATATTCATAATAAAAGAGAAGCAGTTGCCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
3UTR GCA 72 bp TATTTGCTCCTCCAAGCTGACCGGCATTCCCAGCCTTaGCTCCTCAGGCCGCTCCCGGAGGTACACTGGGGC +
Preference number: 3 (lower is better)
Translates to: YLLLQADRHSQP*LLRPLPEVHWG
Trigger: GCCCCAGTGTACCTCCGGGAGCGGCCTGAGGAGGCAAGGCTGGGAATGCCGGTCAGCTTGGAGGAGCAAATA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597993.5
3UTR CCA 72 bp CAGCCTTGCCTCCTCAGGCCGCTCCCGGAGGTACACTaGGGCAATGGACTCAACTTCTCTTGGGCCTCAGTT +
Preference number: 3 (lower is better)
Translates to: QPCLLRPLPEVH*GNGLNFSWASV
Trigger: AACTGAGGCCCAAGAGAAGTTGAGTCCATTGCCCCAGTGTACCTCCGGGAGCGGCCTGAGGAGGCAAGGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597993.5
3UTR CCA 72 bp CCTCCTCAGGCCGCTCCCGGAGGTACACTGGGGCAATaGACTCAACTTCTCTTGGGCCTCAGTTTCTTCCTC +
Preference number: 3 (lower is better)
Translates to: PPQAAPGGTLGQ*TQLLLGLSFFL
Trigger: GAGGAAGAAACTGAGGCCCAAGAGAAGTTGAGTCCATTGCCCCAGTGTACCTCCGGGAGCGGCCTGAGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597993.5
3UTR-3UTR CAA 90 bp CCTCAGGCCGCTCCCGGAGGTACACTGGGGCAATGGACTCAACTTCTCTTGGGCCTCTGGAAAATGGGGTaGGTGTTACCTCTTTCATCC +
Preference number: 3 (lower is better)
Translates to: PQAAPGGTLGQWTQLLLGLWKMG*VLPLSS
Trigger: GGATGAAAGAGGTAACACCAACCCCATTTTCCAGAG...GCCCAAGAGAAGTTGAGTCCATTGCCCCAGTGTACCTCCGGGAGCGGCCTGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000597993.5
3UTR-3UTR CAA 90 bp CCAAGGCAACCGAGACTTAGCTGTGTGCCCACAGCTGCCCTCGCCAGGCTTGTTATTACTGGGGGAGTTTaGCTATTGTTAAGAAATGTC +
Preference number: 3 (lower is better)
Translates to: PRQPRLSCVPTAALARLVITGGV*LLLRNV
Trigger: GACATTTCTTAACAATAGCAAAACTCCCCCAGTAAT...AACAAGCCTGGCGAGGGCAGCTGTGGGCACACAGCTAAGTCTCGGTTGCCTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
3UTR-3UTR CAA 90 bp GAAATTTCCGTTTCCCGCAGATGTGATGTAGGAAGCTACAACTGCCAACTCCTGCTGCCCTCGCCAGGCTaGTTTTGTGAGGGAATAATC +
Preference number: 3 (lower is better)
Translates to: EISVSRRCDVGSYNCQLLLPSPG*FCEGII
Trigger: GATTATTCCCTCACAAAACAAGCCTGGCGAGGGCAG...CAGGAGTTGGCAGTTGTAGCTTCCTACATCACATCTGCGGGAAACGGAAATTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
3UTR-3UTR CAA 90 bp ATAAAAAGGAAGGAAGAAATTTCCGTTTCCCGCAGATGTGATGTAGGAAGCTACCTGCCCTCGCCAGGCTaGTTTTGTGAGGGAATAATC +
Preference number: 3 (lower is better)
Translates to: IKRKEEISVSRRCDVGSYLPSPG*FCEGII
Trigger: GATTATTCCCTCACAAAACAAGCCTGGCGAGGGCAG...GTAGCTTCCTACATCACATCTGCGGGAAACGGAAATTTCTTCCTTCCTTTTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
3UTR TCA 72 bp AAAAAGGAAGGAAGAAATTTCCGTTTCCCGCAGATGTaGTGTAGGAAGCTACAACTGCCAACTCCTGAGCAT +
Preference number: 3 (lower is better)
Translates to: KKEGRNFRFPQM*CRKLQLPTPEH
Trigger: ATGCTCAGGAGTTGGCAGTTGTAGCTTCCTACATCACATCTGCGGGAAACGGAAATTTCTTCCTTCCTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
3UTR-3UTR CAA 90 bp AGGCAACTGCTTCTCTTTTATTATGAATATGATTTGAATCTACCCACTGCACACATTACTGGGGGAGTTTaGCTATTGTTAAGAAATGTC +
Preference number: 3 (lower is better)
Translates to: RQLLLFYYEYDLNLPTAHITGGV*LLLRNV
Trigger: GACATTTCTTAACAATAGCAAAACTCCCCCAGTAAT...GTGTGCAGTGGGTAGATTCAAATCATATTCATAATAAAAGAGAAGCAGTTGCCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR CCA 90 bp GCTGACCGGCATTCCCAGCCTTGCCTCCTCAGGCCGCTCCCGGAGGTACACTGGCCGCGGCGCAGCTGCTaGCAAAGCTACCAGCCTCCC +
Preference number: 4 (lower is better)
Translates to: ADRHSQPCLLRPLPEVHWPRRSC*QSYQPP
Trigger: GGGAGGCTGGTAGCTTTGCCAGCAGCTGCGCCGCGG...CCAGTGTACCTCCGGGAGCGGCCTGAGGAGGCAAGGCTGGGAATGCCGGTCAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597993.5
CDS-3UTR GCA 90 bp GGCCGCTCCCGGAGGTACACTGGGGCAATGGACTCAACTTCTCTTGGGCCTCAGTCCATGGGCCACCCCTaGCGCGGCGCAGCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: GRSRRYTGAMDSTSLGPQSMGHP*RGAAAG
Trigger: GCCAGCAGCTGCGCCGCGGCAGGGGTGGCCCATGGA...CTGAGGCCCAAGAGAAGTTGAGTCCATTGCCCCAGTGTACCTCCGGGAGCGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597993.5
CDS-3UTR CCA 90 bp CTGACCCCAAGGCAACCGAGACTTAGCTGTGTGCCCACAGCTGCCCTCGCCAGGGACTCTGAGCCGCTGTaGGGGCAGGCAGAGCTGGCC +
Preference number: 4 (lower is better)
Translates to: LTPRQPRLSCVPTAALARDSEPL*GQAELA
Trigger: GGCCAGCTCTGCCTGCCCCCACAGCGGCTCAGAGTC...CCTGGCGAGGGCAGCTGTGGGCACACAGCTAAGTCTCGGTTGCCTTGGGGTCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR CCA 90 bp CTGACCCCAAGGCAACCGAGACTTAGCTGTGTGCCCACAGCTGCCCTCGCCAGGTCCGCCTGCCGGGCTTaGGCCAGAAGGCTGCGATTC +
Preference number: 4 (lower is better)
Translates to: LTPRQPRLSCVPTAALARSACRA*ARRLRF
Trigger: GAATCGCAGCCTTCTGGCCCAAGCCCGGCAGGCGGA...CCTGGCGAGGGCAGCTGTGGGCACACAGCTAAGTCTCGGTTGCCTTGGGGTCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR GCA 90 bp CATTCCCAGCCTTGCCTCCTCAGGCCGCTCCCGGAGGTACACTGGGGCAATGGAGGGCCACAGCCACAGTaGCTGTCCTCTGAGGGTCAC +
Preference number: 4 (lower is better)
Translates to: HSQPCLLRPLPEVHWGNGGPQPQ*LSSEGH
Trigger: GTGACCCTCAGAGGACAGGCACTGTGGCTGTGGCCC...TCCATTGCCCCAGTGTACCTCCGGGAGCGGCCTGAGGAGGCAAGGCTGGGAATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597993.5
CDS-3UTR GCA 90 bp CTGACCCCAAGGCAACCGAGACTTAGCTGTGTGCCCACAGCTGCCCTCGCCAGGCAATGTTTGGAGGCGTaGATCCTGGGGGCCCTGGCC +
Preference number: 4 (lower is better)
Translates to: LTPRQPRLSCVPTAALARQCLEA*ILGALA
Trigger: GGCCAGGGCCCCCAGGATGCACGCCTCCAAACATTG...CCTGGCGAGGGCAGCTGTGGGCACACAGCTAAGTCTCGGTTGCCTTGGGGTCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR CCA 90 bp CTGACCCCAAGGCAACCGAGACTTAGCTGTGTGCCCACAGCTGCCCTCGCCAGGTGGCCCGAGCACTCCTaGAGCCACGTCCTAGTCTCG +
Preference number: 4 (lower is better)
Translates to: LTPRQPRLSCVPTAALARWPEHS*SHVLVS
Trigger: CGAGACTAGGACGTGGCTCCAGGAGTGCTCGGGCCA...CCTGGCGAGGGCAGCTGTGGGCACACAGCTAAGTCTCGGTTGCCTTGGGGTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447857.8
CDS-3UTR GCA 90 bp TGCCTCCTCAGGCCGCTCCCGGAGGTACACTGGGGCAATGGACTCAACTTCTCTCTGCCGCGGCGCAGCTaGTGGCAAAGCTACCAGCCT +
Preference number: 4 (lower is better)
Translates to: CLLRPLPEVHWGNGLNFSLPRRS*WQSYQP
Trigger: AGGCTGGTAGCTTTGCCAGCAGCTGCGCCGCGGCAG...AGAGAAGTTGAGTCCATTGCCCCAGTGTACCTCCGGGAGCGGCCTGAGGAGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597993.5
CDS-3UTR GCA 90 bp CTGACCCCAAGGCAACCGAGACTTAGCTGTGTGCCCACAGCTGCCCTCGCCAGGATGGCCTTGGCAAACTaGAGGGCCTGCTGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: LTPRQPRLSCVPTAALARMALAN*RACWVL
Trigger: CAGCACCCAGCAGGCCCTGCAGTTTGCCAAGGCCAT...CCTGGCGAGGGCAGCTGTGGGCACACAGCTAAGTCTCGGTTGCCTTGGGGTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR CCA 90 bp CCTCAGGCCGCTCCCGGAGGTACACTGGGGCAATGGACTCAACTTCTCTTGGGCTGGCCCGAGCACTCCTaGAGCCACGTCCTAGTCTCG +
Preference number: 4 (lower is better)
Translates to: PQAAPGGTLGQWTQLLLGWPEHS*SHVLVS
Trigger: CGAGACTAGGACGTGGCTCCAGGAGTGCTCGGGCCA...GCCCAAGAGAAGTTGAGTCCATTGCCCCAGTGTACCTCCGGGAGCGGCCTGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597993.5
CDS-3UTR CCA 90 bp AGGAGAATCACTGAGGCCCTGACCCCAAGGCAACCGAGACTTAGCTGTGTGCCCGCATCCTGGGGGCCCTaGCCTGTCACAGCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: RRITEALTPRQPRLSCVPASWGP*PVTASR
Trigger: CCTGGAGGCTGTGACAGGCCAGGGCCCCCAGGATGC...GGGCACACAGCTAAGTCTCGGTTGCCTTGGGGTCAGGGCCTCAGTGATTCTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR CCA 90 bp CTGACCCCAAGGCAACCGAGACTTAGCTGTGTGCCCACAGCTGCCCTCGCCAGGGCTCTCCAGGTTGGCTaGCTCCTCAGCTTCTGGGCA +
Preference number: 4 (lower is better)
Translates to: LTPRQPRLSCVPTAALARALQVG*LLSFWA
Trigger: TGCCCAGAAGCTGAGGAGCCAGCCAACCTGGAGAGC...CCTGGCGAGGGCAGCTGTGGGCACACAGCTAAGTCTCGGTTGCCTTGGGGTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR GCA 90 bp AGGAGAATCACTGAGGCCCTGACCCCAAGGCAACCGAGACTTAGCTGTGTGCCCCTGCCGCGGCGCAGCTaGTGGCAAAGCTACCAGCCT +
Preference number: 4 (lower is better)
Translates to: RRITEALTPRQPRLSCVPLPRRS*WQSYQP
Trigger: AGGCTGGTAGCTTTGCCAGCAGCTGCGCCGCGGCAG...GGGCACACAGCTAAGTCTCGGTTGCCTTGGGGTCAGGGCCTCAGTGATTCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447857.8
CDS-3UTR GCA 90 bp ACAGGGATGTGGATCCCCTGTACTCTATCTAGGGTAAGCCTGCGCAACAGTGGATCCATGGGCCACCCCTaGCGCGGCGCAGCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: TGMWIPCTLSRVSLRNSGSMGHP*RGAAAG
Trigger: GCCAGCAGCTGCGCCGCGGCAGGGGTGGCCCATGGA...TCCACTGTTGCGCAGGCTTACCCTAGATAGAGTACAGGGGATCCACATCCCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447857.8
CDS-3UTR GCA 90 bp CCAAGGCAACCGAGACTTAGCTGTGTGCCCACAGCTGCCCTCGCCAGGCTTGTTGGGCCACAGCCACAGTaGCTGTCCTCTGAGGGTCAC +
Preference number: 4 (lower is better)
Translates to: PRQPRLSCVPTAALARLVGPQPQ*LSSEGH
Trigger: GTGACCCTCAGAGGACAGGCACTGTGGCTGTGGCCC...AACAAGCCTGGCGAGGGCAGCTGTGGGCACACAGCTAAGTCTCGGTTGCCTTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR CCA 90 bp CTGACCCCAAGGCAACCGAGACTTAGCTGTGTGCCCACAGCTGCCCTCGCCAGGCAATGGGGATCCCAGTaGAGAGAGGGCCAGGGGATT +
Preference number: 4 (lower is better)
Translates to: LTPRQPRLSCVPTAALARQWGSQ*REGQGI
Trigger: AATCCCCTGGCCCTCTCTCCACTGGGATCCCCATTG...CCTGGCGAGGGCAGCTGTGGGCACACAGCTAAGTCTCGGTTGCCTTGGGGTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR CCA 90 bp GTGGAGTTGAGTATTTGCTCCTCCAAGCTGACCGGCATTCCCAGCCTTGCCTCCGAGCACTTTCCGCAGTaGGGCCACCCACCGGGCCCT +
Preference number: 4 (lower is better)
Translates to: VELSICSSKLTGIPSLASEHFPQ*GHPPGP
Trigger: AGGGCCCGGTGGGTGGCCCCACTGCGGAAAGTGCTC...GGAGGCAAGGCTGGGAATGCCGGTCAGCTTGGAGGAGCAAATACTCAACTCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597993.5
CDS-3UTR TCA 90 bp CTGACCCCAAGGCAACCGAGACTTAGCTGTGTGCCCACAGCTGCCCTCGCCAGGCACTGGTCTCATGGATaGCTTCCTCCCACTGCCACA +
Preference number: 4 (lower is better)
Translates to: LTPRQPRLSCVPTAALARHWSHG*LPPTAT
Trigger: TGTGGCAGTGGGAGGAAGTCATCCATGAGACCAGTG...CCTGGCGAGGGCAGCTGTGGGCACACAGCTAAGTCTCGGTTGCCTTGGGGTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR GCA 90 bp CCAAGGCAACCGAGACTTAGCTGTGTGCCCACAGCTGCCCTCGCCAGGCTTGTTCGAGACTTAGCTGTGTaGCCACAGCTGCCCTCGCCA +
Preference number: 4 (lower is better)
Translates to: PRQPRLSCVPTAALARLVRDLAV*PQLPSP
Trigger: TGGCGAGGGCAGCTGTGGGCACACAGCTAAGTCTCG...AACAAGCCTGGCGAGGGCAGCTGTGGGCACACAGCTAAGTCTCGGTTGCCTTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR CCA 90 bp CCAAGGCAACCGAGACTTAGCTGTGTGCCCACAGCTGCCCTCGCCAGGCTTGTTGCTCTCCAGGTTGGCTaGCTCCTCAGCTTCTGGGCA +
Preference number: 4 (lower is better)
Translates to: PRQPRLSCVPTAALARLVALQVG*LLSFWA
Trigger: TGCCCAGAAGCTGAGGAGCCAGCCAACCTGGAGAGC...AACAAGCCTGGCGAGGGCAGCTGTGGGCACACAGCTAAGTCTCGGTTGCCTTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR TCA 90 bp AGGAGAATCACTGAGGCCCTGACCCCAAGGCAACCGAGACTTAGCTGTGTGCCCCCCAGGCCCTCCTCCTaGCTGGGACCAGCTTTTTCA +
Preference number: 4 (lower is better)
Translates to: RRITEALTPRQPRLSCVPPRPSS*LGPAFS
Trigger: TGAAAAAGCTGGTCCCAGTCAGGAGGAGGGCCTGGG...GGGCACACAGCTAAGTCTCGGTTGCCTTGGGGTCAGGGCCTCAGTGATTCTCCT
60% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR GCA 90 bp AGGAGAATCACTGAGGCCCTGACCCCAAGGCAACCGAGACTTAGCTGTGTGCCCGCAGGGCCTGCTGGGTaGTGTGAAGCTGCTTACGCA +
Preference number: 4 (lower is better)
Translates to: RRITEALTPRQPRLSCVPAGPAG*CEAAYA
Trigger: TGCGTAAGCAGCTTCACAGCACCCAGCAGGCCCTGC...GGGCACACAGCTAAGTCTCGGTTGCCTTGGGGTCAGGGCCTCAGTGATTCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR GCA 90 bp AGGAGAATCACTGAGGCCCTGACCCCAAGGCAACCGAGACTTAGCTGTGTGCCCATGGCCTTGGCAAACTaGAGGGCCTGCTGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: RRITEALTPRQPRLSCVPMALAN*RACWVL
Trigger: CAGCACCCAGCAGGCCCTGCAGTTTGCCAAGGCCAT...GGGCACACAGCTAAGTCTCGGTTGCCTTGGGGTCAGGGCCTCAGTGATTCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR CCA 90 bp AATGGGGATCCCAGTGGAGAGAGGGCCAGGGGATTTATTGAGCTAGACACTGCTCCGCGGCGCAGCTGCTaGCAAAGCTACCAGCCTCCC +
Preference number: 4 (lower is better)
Translates to: NGDPSGERARGFIELDTAPRRSC*QSYQPP
Trigger: GGGAGGCTGGTAGCTTTGCCAGCAGCTGCGCCGCGG...AGCAGTGTCTAGCTCAATAAATCCCCTGGCCCTCTCTCCACTGGGATCCCCATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447857.8
CDS-3UTR CCA 90 bp CCAAGGCAACCGAGACTTAGCTGTGTGCCCACAGCTGCCCTCGCCAGGCTTGTTCCGCGCAGGTCTCTCTaGAGGGTTTTCTGGGATGTC +
Preference number: 4 (lower is better)
Translates to: PRQPRLSCVPTAALARLVPRRSL*RVFWDV
Trigger: GACATCCCAGAAAACCCTCCAGAGAGACCTGCGCGG...AACAAGCCTGGCGAGGGCAGCTGTGGGCACACAGCTAAGTCTCGGTTGCCTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR CCA 90 bp CTGACCCCAAGGCAACCGAGACTTAGCTGTGTGCCCACAGCTGCCCTCGCCAGGAAGCCTGCGCAACAGTaGACTAACAATGGGGATCCC +
Preference number: 4 (lower is better)
Translates to: LTPRQPRLSCVPTAALARKPAQQ*TNNGDP
Trigger: GGGATCCCCATTGTTAGTCCACTGTTGCGCAGGCTT...CCTGGCGAGGGCAGCTGTGGGCACACAGCTAAGTCTCGGTTGCCTTGGGGTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR TCA 90 bp CTGACCCCAAGGCAACCGAGACTTAGCTGTGTGCCCACAGCTGCCCTCGCCAGGCAATCCAGTCACGCATaGCAACCAGGAAAGTGTCCA +
Preference number: 4 (lower is better)
Translates to: LTPRQPRLSCVPTAALARQSSHA*QPGKCP
Trigger: TGGACACTTTCCTGGTTGTCATGCGTGACTGGATTG...CCTGGCGAGGGCAGCTGTGGGCACACAGCTAAGTCTCGGTTGCCTTGGGGTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR TCA 90 bp AATGGGGATCCCAGTGGAGAGAGGGCCAGGGGATTTATTGAGCTAGACACTGCTCCAGACGTCGGTTGCTaGGCTCCAGGTCCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: NGDPSGERARGFIELDTAPDVGC*APGPPG
Trigger: GCCTGGAGGACCTGGAGCTCAGCAACCGACGTCTGG...AGCAGTGTCTAGCTCAATAAATCCCCTGGCCCTCTCTCCACTGGGATCCCCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR TCA 90 bp TCTAGGGTAAGCCTGCGCAACAGTGGACTAACAATGGGGATCCCAGTGGAGAGACTCCCCAAGGCGTGCTaGCCCCTCCTCAGCTGTCTC +
Preference number: 4 (lower is better)
Translates to: SRVSLRNSGLTMGIPVERLPKAC*PLLSCL
Trigger: GAGACAGCTGAGGAGGGGTCAGCACGCCTTGGGGAG...TCTCTCCACTGGGATCCCCATTGTTAGTCCACTGTTGCGCAGGCTTACCCTAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR GCA 90 bp CTGACCCCAAGGCAACCGAGACTTAGCTGTGTGCCCACAGCTGCCCTCGCCAGGTCCAGCCTCAGTTCCTaGGTCGTCACTCTGTATTCT +
Preference number: 4 (lower is better)
Translates to: LTPRQPRLSCVPTAALARSSLSS*VVTLYS
Trigger: AGAATACAGAGTGACGACGCAGGAACTGAGGCTGGA...CCTGGCGAGGGCAGCTGTGGGCACACAGCTAAGTCTCGGTTGCCTTGGGGTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR CCA 90 bp GAACGTGGAGTTGAGTATTTGCTCCTCCAAGCTGACCGGCATTCCCAGCCTTGCGGGAAAAGGACCAGCTaGCCCGAGCACTCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: ERGVEYLLLQADRHSQPCGKRTS*PEHSWS
Trigger: GCTCCAGGAGTGCTCGGGCCAGCTGGTCCTTTTCCC...GCAAGGCTGGGAATGCCGGTCAGCTTGGAGGAGCAAATACTCAACTCCACGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597993.5
CDS-3UTR CCA 90 bp GCCGCTCCCGGAGGTACACTGGGGCAATGGACTCAACTTCTCTTGGGCCTCAGTAGCCTCCCTCCTTCATaGGGAGGGATGGGAAAAGGA +
Preference number: 4 (lower is better)
Translates to: AAPGGTLGQWTQLLLGLSSLPPS*GGMGKG
Trigger: TCCTTTTCCCATCCCTCCCCATGAAGGAGGGAGGCT...ACTGAGGCCCAAGAGAAGTTGAGTCCATTGCCCCAGTGTACCTCCGGGAGCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597993.5
CDS-3UTR CCA 90 bp AGGAGAATCACTGAGGCCCTGACCCCAAGGCAACCGAGACTTAGCTGTGTGCCCCTGTTGGCCAATGTTTaGAGGCGTGCATCCTGGGGG +
Preference number: 4 (lower is better)
Translates to: RRITEALTPRQPRLSCVPLLANV*RRASWG
Trigger: CCCCCAGGATGCACGCCTCCAAACATTGGCCAACAG...GGGCACACAGCTAAGTCTCGGTTGCCTTGGGGTCAGGGCCTCAGTGATTCTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR CCA 90 bp ACAGGGATGTGGATCCCCTGTACTCTATCTAGGGTAAGCCTGCGCAACAGTGGATCCGCCTGCCGGGCTTaGGCCAGAAGGCTGCGATTC +
Preference number: 4 (lower is better)
Translates to: TGMWIPCTLSRVSLRNSGSACRA*ARRLRF
Trigger: GAATCGCAGCCTTCTGGCCCAAGCCCGGCAGGCGGA...TCCACTGTTGCGCAGGCTTACCCTAGATAGAGTACAGGGGATCCACATCCCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR CCA 90 bp CTGACCCCAAGGCAACCGAGACTTAGCTGTGTGCCCACAGCTGCCCTCGCCAGGAAGTGTCCTTCTCCATaGCCAGCTCCTGACTTCTCT +
Preference number: 4 (lower is better)
Translates to: LTPRQPRLSCVPTAALARKCPSP*PAPDFS
Trigger: AGAGAAGTCAGGAGCTGGCCATGGAGAAGGACACTT...CCTGGCGAGGGCAGCTGTGGGCACACAGCTAAGTCTCGGTTGCCTTGGGGTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR CCA 90 bp AGGAGAATCACTGAGGCCCTGACCCCAAGGCAACCGAGACTTAGCTGTGTGCCCCTCTGGAGGGTTTTCTaGGATGTCTCCAGGGCGAGG +
Preference number: 4 (lower is better)
Translates to: RRITEALTPRQPRLSCVPLWRVF*DVSRAR
Trigger: CCTCGCCCTGGAGACATCCCAGAAAACCCTCCAGAG...GGGCACACAGCTAAGTCTCGGTTGCCTTGGGGTCAGGGCCTCAGTGATTCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR CCA 90 bp TTGCTCCTCCAAGCTGACCGGCATTCCCAGCCTTGCCTCCTCAGGCCGCTCCCGGGACTCAACTTCTCTTaGGCCTCAGTTTCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: LLLQADRHSQPCLLRPLPGLNFS*ASVSSS
Trigger: AGAGGAAGAAACTGAGGCCCAAGAGAAGTTGAGTCC...CGGGAGCGGCCTGAGGAGGCAAGGCTGGGAATGCCGGTCAGCTTGGAGGAGCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597993.5
CDS-3UTR CCA 90 bp GGCCGCTCCCGGAGGTACACTGGGGCAATGGACTCAACTTCTCTTGGGCCTCAGGGTACACTGGGGCAATaGACTCAACTTCTCTTGGGC +
Preference number: 4 (lower is better)
Translates to: GRSRRYTGAMDSTSLGPQGTLGQ*TQLLLG
Trigger: GCCCAAGAGAAGTTGAGTCCATTGCCCCAGTGTACC...CTGAGGCCCAAGAGAAGTTGAGTCCATTGCCCCAGTGTACCTCCGGGAGCGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597993.5
CDS-3UTR TCA 90 bp ACAGGGATGTGGATCCCCTGTACTCTATCTAGGGTAAGCCTGCGCAACAGTGGAACGACGAACGGCAGTTaGGTTGGGGGAGGTGCGCGT +
Preference number: 4 (lower is better)
Translates to: TGMWIPCTLSRVSLRNSGTTNGS*VGGGAR
Trigger: ACGCGCACCTCCCCCAACTCAACTGCCGTTCGTCGT...TCCACTGTTGCGCAGGCTTACCCTAGATAGAGTACAGGGGATCCACATCCCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447857.8
CDS-3UTR TCA 90 bp ACAGGGATGTGGATCCCCTGTACTCTATCTAGGGTAAGCCTGCGCAACAGTGGAGCCTGCTGGGTGCTGTaGAGCTGCTTACGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: TGMWIPCTLSRVSLRNSGACWVL*SCLRRA
Trigger: GGCTCTGCGTAAGCAGCTTCACAGCACCCAGCAGGC...TCCACTGTTGCGCAGGCTTACCCTAGATAGAGTACAGGGGATCCACATCCCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR TCA 90 bp CCTCAGGCCGCTCCCGGAGGTACACTGGGGCAATGGACTCAACTTCTCTTGGGCTCACTCAACAGTAAGTaGGCTCCCACAGTGAGTCAG +
Preference number: 4 (lower is better)
Translates to: PQAAPGGTLGQWTQLLLGSLNSK*APTVSQ
Trigger: CTGACTCACTGTGGGAGCTCACTTACTGTTGAGTGA...GCCCAAGAGAAGTTGAGTCCATTGCCCCAGTGTACCTCCGGGAGCGGCCTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597993.5
CDS-3UTR GCA 90 bp TCTAGGGTAAGCCTGCGCAACAGTGGACTAACAATGGGGATCCCAGTGGAGAGACATCCAGATGGCAGTTaGCGGGAGGTCAGGGCTCCC +
Preference number: 4 (lower is better)
Translates to: SRVSLRNSGLTMGIPVERHPDGS*REVRAP
Trigger: GGGAGCCCTGACCTCCCGGCAACTGCCATCTGGATG...TCTCTCCACTGGGATCCCCATTGTTAGTCCACTGTTGCGCAGGCTTACCCTAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR GCA 90 bp AATGGGGATCCCAGTGGAGAGAGGGCCAGGGGATTTATTGAGCTAGACACTGCTCCAGGTCCTCCAGGCTaGTCAGCAGGTCAGCTGTGG +
Preference number: 4 (lower is better)
Translates to: NGDPSGERARGFIELDTAPGPPG*SAGQLW
Trigger: CCACAGCTGACCTGCTGAGCAGCCTGGAGGACCTGG...AGCAGTGTCTAGCTCAATAAATCCCCTGGCCCTCTCTCCACTGGGATCCCCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR GCA 90 bp AATGGGGATCCCAGTGGAGAGAGGGCCAGGGGATTTATTGAGCTAGACACTGCTTGCTCCTTTTCCGCCTaGCGGGCTTGGGCCAGAAGG +
Preference number: 4 (lower is better)
Translates to: NGDPSGERARGFIELDTACSFSA*RAWARR
Trigger: CCTTCTGGCCCAAGCCCGGCAGGCGGAAAAGGAGCA...AGCAGTGTCTAGCTCAATAAATCCCCTGGCCCTCTCTCCACTGGGATCCCCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR GCA 90 bp AATGGGGATCCCAGTGGAGAGAGGGCCAGGGGATTTATTGAGCTAGACACTGCTGCCACCAGATGCTGCTaGTCCTTTTCCGCCTGCCGG +
Preference number: 4 (lower is better)
Translates to: NGDPSGERARGFIELDTAATRCC*SFSACR
Trigger: CCGGCAGGCGGAAAAGGAGCAGCAGCATCTGGTGGC...AGCAGTGTCTAGCTCAATAAATCCCCTGGCCCTCTCTCCACTGGGATCCCCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR GCA 90 bp CTGACCCCAAGGCAACCGAGACTTAGCTGTGTGCCCACAGCTGCCCTCGCCAGGTTTGAATCTACCCACTaGACACTGAGGCTACTGCCT +
Preference number: 4 (lower is better)
Translates to: LTPRQPRLSCVPTAALARFESTH*TLRLLP
Trigger: AGGCAGTAGCCTCAGTGTGCAGTGGGTAGATTCAAA...CCTGGCGAGGGCAGCTGTGGGCACACAGCTAAGTCTCGGTTGCCTTGGGGTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR GCA 90 bp CCAAGGCAACCGAGACTTAGCTGTGTGCCCACAGCTGCCCTCGCCAGGCTTGTTGGAGAGATCAGCAGTTaGCACTTCCTGTCGAATGGC +
Preference number: 4 (lower is better)
Translates to: PRQPRLSCVPTAALARLVGEISS*HFLSNG
Trigger: GCCATTCGACAGGAAGTGGCAACTGCTGATCTCTCC...AACAAGCCTGGCGAGGGCAGCTGTGGGCACACAGCTAAGTCTCGGTTGCCTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600570.1
CDS-3UTR CCA 90 bp TCTAGGGTAAGCCTGCGCAACAGTGGACTAACAATGGGGATCCCAGTGGAGAGAGGGAAAAGGACCAGCTaGCCCGAGCACTCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: SRVSLRNSGLTMGIPVERGKRTS*PEHSWS
Trigger: GCTCCAGGAGTGCTCGGGCCAGCTGGTCCTTTTCCC...TCTCTCCACTGGGATCCCCATTGTTAGTCCACTGTTGCGCAGGCTTACCCTAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447857.8
CDS-3UTR CCA 90 bp CCAAGGCAACCGAGACTTAGCTGTGTGCCCACAGCTGCCCTCGCCAGGCTTGTTTTCTTCAGGGTGCGCTaGCTCTCCCTGGAAGTTTCT +
Preference number: 4 (lower is better)
Translates to: PRQPRLSCVPTAALARLVFFRVR*LSLEVS
Trigger: AGAAACTTCCAGGGAGAGCCAGCGCACCCTGAAGAA...AACAAGCCTGGCGAGGGCAGCTGTGGGCACACAGCTAAGTCTCGGTTGCCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR CCA 90 bp TGGATCCCCTGTACTCTATCTAGGGTAAGCCTGCGCAACAGTGGACTAACAATGGGCACCAGGGCTTGCTaGAGTTCCCGCCGCGCAGGT +
Preference number: 4 (lower is better)
Translates to: WIPCTLSRVSLRNSGLTMGTRAC*SSRRAG
Trigger: ACCTGCGCGGCGGGAACTCCAGCAAGCCCTGGTGCC...CATTGTTAGTCCACTGTTGCGCAGGCTTACCCTAGATAGAGTACAGGGGATCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR TCA 90 bp TGCCTCCTCAGGCCGCTCCCGGAGGTACACTGGGGCAATGGACTCAACTTCTCTCTTCGAACGTGGAGTTaGGTATTTGCTCCTCCAAGC +
Preference number: 4 (lower is better)
Translates to: CLLRPLPEVHWGNGLNFSLRTWS*VFAPPS
Trigger: GCTTGGAGGAGCAAATACTCAACTCCACGTTCGAAG...AGAGAAGTTGAGTCCATTGCCCCAGTGTACCTCCGGGAGCGGCCTGAGGAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597993.5
CDS-3UTR TCA 90 bp TCTAGGGTAAGCCTGCGCAACAGTGGACTAACAATGGGGATCCCAGTGGAGAGACAGGGAGATCAGCCGTaGCCTGGCTCTCTGCATCCT +
Preference number: 4 (lower is better)
Translates to: SRVSLRNSGLTMGIPVERQGDQP*PGSLHP
Trigger: AGGATGCAGAGAGCCAGGTCACGGCTGATCTCCCTG...TCTCTCCACTGGGATCCCCATTGTTAGTCCACTGTTGCGCAGGCTTACCCTAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR TCA 90 bp ACAGGGATGTGGATCCCCTGTACTCTATCTAGGGTAAGCCTGCGCAACAGTGGAGAATCACTGAGGCCCTaGCCCCAAGGCAACCGAGAC +
Preference number: 4 (lower is better)
Translates to: TGMWIPCTLSRVSLRNSGESLRP*PQGNRD
Trigger: GTCTCGGTTGCCTTGGGGTCAGGGCCTCAGTGATTC...TCCACTGTTGCGCAGGCTTACCCTAGATAGAGTACAGGGGATCCACATCCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR TCA 90 bp AATGGGGATCCCAGTGGAGAGAGGGCCAGGGGATTTATTGAGCTAGACACTGCTGAATCACTGAGGCCCTaGCCCCAAGGCAACCGAGAC +
Preference number: 4 (lower is better)
Translates to: NGDPSGERARGFIELDTAESLRP*PQGNRD
Trigger: GTCTCGGTTGCCTTGGGGTCAGGGCCTCAGTGATTC...AGCAGTGTCTAGCTCAATAAATCCCCTGGCCCTCTCTCCACTGGGATCCCCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR TCA 90 bp ACAGGGATGTGGATCCCCTGTACTCTATCTAGGGTAAGCCTGCGCAACAGTGGAGGACAGGAGAATCACTaGGGCCCTGACCCCAAGGCA +
Preference number: 4 (lower is better)
Translates to: TGMWIPCTLSRVSLRNSGGQENH*GPDPKA
Trigger: TGCCTTGGGGTCAGGGCCTCAGTGATTCTCCTGTCC...TCCACTGTTGCGCAGGCTTACCCTAGATAGAGTACAGGGGATCCACATCCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR TCA 90 bp TCTAGGGTAAGCCTGCGCAACAGTGGACTAACAATGGGGATCCCAGTGGAGAGAGGACAGGAGAATCACTaGGGCCCTGACCCCAAGGCA +
Preference number: 4 (lower is better)
Translates to: SRVSLRNSGLTMGIPVERGQENH*GPDPKA
Trigger: TGCCTTGGGGTCAGGGCCTCAGTGATTCTCCTGTCC...TCTCTCCACTGGGATCCCCATTGTTAGTCCACTGTTGCGCAGGCTTACCCTAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR TCA 90 bp AGGAGAATCACTGAGGCCCTGACCCCAAGGCAACCGAGACTTAGCTGTGTGCCCCTACCCACTGCACACTaGGGCTACTGCCTCTCTTTA +
Preference number: 4 (lower is better)
Translates to: RRITEALTPRQPRLSCVPLPTAH*GYCLSL
Trigger: TAAAGAGAGGCAGTAGCCTCAGTGTGCAGTGGGTAG...GGGCACACAGCTAAGTCTCGGTTGCCTTGGGGTCAGGGCCTCAGTGATTCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR TCA 90 bp GAGTTGAGTATTTGCTCCTCCAAGCTGACCGGCATTCCCAGCCTTGCCTCCTCAAGTGAGCTCCCACAGTaGGTCAGGAGTTGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: ELSICSSKLTGIPSLASSSELPQ*VRSCSG
Trigger: CCCAGAGCAACTCCTGACTCACTGTGGGAGCTCACT...TGAGGAGGCAAGGCTGGGAATGCCGGTCAGCTTGGAGGAGCAAATACTCAACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597993.5
CDS-3UTR CCA 90 bp TGGATCCCCTGTACTCTATCTAGGGTAAGCCTGCGCAACAGTGGACTAACAATGTGGAGGCGTGCATCCTaGGGGCCCTGGCCTGTCACA +
Preference number: 4 (lower is better)
Translates to: WIPCTLSRVSLRNSGLTMWRRAS*GPWPVT
Trigger: TGTGACAGGCCAGGGCCCCCAGGATGCACGCCTCCA...CATTGTTAGTCCACTGTTGCGCAGGCTTACCCTAGATAGAGTACAGGGGATCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR CCA 90 bp AGGAGAATCACTGAGGCCCTGACCCCAAGGCAACCGAGACTTAGCTGTGTGCCCTGCTCCGCTGCAATTTaGCATTCTCCCCAACCAGAC +
Preference number: 4 (lower is better)
Translates to: RRITEALTPRQPRLSCVPCSAAI*HSPQPD
Trigger: GTCTGGTTGGGGAGAATGCCAAATTGCAGCGGAGCA...GGGCACACAGCTAAGTCTCGGTTGCCTTGGGGTCAGGGCCTCAGTGATTCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR CCA 90 bp AGGAGAATCACTGAGGCCCTGACCCCAAGGCAACCGAGACTTAGCTGTGTGCCCAGGAGCTGGGATCAGTaGATGTCGAGTGACTCTGAG +
Preference number: 4 (lower is better)
Translates to: RRITEALTPRQPRLSCVPRSWDQ*MSSDSE
Trigger: CTCAGAGTCACTCGACATCCACTGATCCCAGCTCCT...GGGCACACAGCTAAGTCTCGGTTGCCTTGGGGTCAGGGCCTCAGTGATTCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR CCA 90 bp AGGAAGGAAGAAATTTCCGTTTCCCGCAGATGTGATGTAGGAAGCTACAACTGCGGGCCAGGTGGGAGGTaGGGACGGGCCAAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: RKEEISVSRRCDVGSYNCGPGGR*GRAKQQ
Trigger: CTGCTGCTTGGCCCGTCCCCACCTCCCACCTGGCCC...GCAGTTGTAGCTTCCTACATCACATCTGCGGGAAACGGAAATTTCTTCCTTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR GCA 90 bp TCTAGGGTAAGCCTGCGCAACAGTGGACTAACAATGGGGATCCCAGTGGAGAGACTTGGGCCAGAAGGCTaGGATTCTGTTCCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: SRVSLRNSGLTMGIPVERLGPEG*DSVPPG
Trigger: GCCTGGAGGAACAGAATCGCAGCCTTCTGGCCCAAG...TCTCTCCACTGGGATCCCCATTGTTAGTCCACTGTTGCGCAGGCTTACCCTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR CCA 90 bp AGGAAGGAAGAAATTTCCGTTTCCCGCAGATGTGATGTAGGAAGCTACAACTGCGCATCCTGGGGGCCCTaGCCTGTCACAGCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: RKEEISVSRRCDVGSYNCASWGP*PVTASR
Trigger: CCTGGAGGCTGTGACAGGCCAGGGCCCCCAGGATGC...GCAGTTGTAGCTTCCTACATCACATCTGCGGGAAACGGAAATTTCTTCCTTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR CCA 90 bp TCTAGGGTAAGCCTGCGCAACAGTGGACTAACAATGGGGATCCCAGTGGAGAGATTCTGGGCATCCAGATaGCAGTTGCCGGGAGGTCAG +
Preference number: 4 (lower is better)
Translates to: SRVSLRNSGLTMGIPVERFWASR*QLPGGQ
Trigger: CTGACCTCCCGGCAACTGCCATCTGGATGCCCAGAA...TCTCTCCACTGGGATCCCCATTGTTAGTCCACTGTTGCGCAGGCTTACCCTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR CCA 90 bp ACAGGGATGTGGATCCCCTGTACTCTATCTAGGGTAAGCCTGCGCAACAGTGGACGAAGCTCTCCAGGTTaGCTGGCTCCTCAGCTTCTG +
Preference number: 4 (lower is better)
Translates to: TGMWIPCTLSRVSLRNSGRSSPG*LAPQLL
Trigger: CAGAAGCTGAGGAGCCAGCCAACCTGGAGAGCTTCG...TCCACTGTTGCGCAGGCTTACCCTAGATAGAGTACAGGGGATCCACATCCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR CCA 90 bp AATGGGGATCCCAGTGGAGAGAGGGCCAGGGGATTTATTGAGCTAGACACTGCTCGAAGCTCTCCAGGTTaGCTGGCTCCTCAGCTTCTG +
Preference number: 4 (lower is better)
Translates to: NGDPSGERARGFIELDTARSSPG*LAPQLL
Trigger: CAGAAGCTGAGGAGCCAGCCAACCTGGAGAGCTTCG...AGCAGTGTCTAGCTCAATAAATCCCCTGGCCCTCTCTCCACTGGGATCCCCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR CCA 90 bp ACAGGGATGTGGATCCCCTGTACTCTATCTAGGGTAAGCCTGCGCAACAGTGGACTCTGGAGGGTTTTCTaGGATGTCTCCAGGGCGAGG +
Preference number: 4 (lower is better)
Translates to: TGMWIPCTLSRVSLRNSGLWRVF*DVSRAR
Trigger: CCTCGCCCTGGAGACATCCCAGAAAACCCTCCAGAG...TCCACTGTTGCGCAGGCTTACCCTAGATAGAGTACAGGGGATCCACATCCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR CCA 90 bp AGGAAGGAAGAAATTTCCGTTTCCCGCAGATGTGATGTAGGAAGCTACAACTGCGACTCTGAGCCGCTGTaGGGGCAGGCAGAGCTGGCC +
Preference number: 4 (lower is better)
Translates to: RKEEISVSRRCDVGSYNCDSEPL*GQAELA
Trigger: GGCCAGCTCTGCCTGCCCCCACAGCGGCTCAGAGTC...GCAGTTGTAGCTTCCTACATCACATCTGCGGGAAACGGAAATTTCTTCCTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
3UTR CAA 72 bp CTGAGGGTCACAAGCTTCGAACGTGGAGTTGAGTATTaGCTCCTCCAAGCTGACCGGCATTCCCAGCCTTGC +
Preference number: 4 (lower is better)
Translates to: LRVTSFERGVEY*LLQADRHSQPC
Trigger: GCAAGGCTGGGAATGCCGGTCAGCTTGGAGGAGCAAATACTCAACTCCACGTTCGAAGCTTGTGACCCTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597993.5
CDS-3UTR TCA 90 bp TGGATCCCCTGTACTCTATCTAGGGTAAGCCTGCGCAACAGTGGACTAACAATGCCCAGGCCCTCCTCCTaGCTGGGACCAGCTTTTTCA +
Preference number: 4 (lower is better)
Translates to: WIPCTLSRVSLRNSGLTMPRPSS*LGPAFS
Trigger: TGAAAAAGCTGGTCCCAGTCAGGAGGAGGGCCTGGG...CATTGTTAGTCCACTGTTGCGCAGGCTTACCCTAGATAGAGTACAGGGGATCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR GCA 90 bp GAAATTTCCGTTTCCCGCAGATGTGATGTAGGAAGCTACAACTGCCAACTCCTGGGGCCACAGCCACAGTaGCTGTCCTCTGAGGGTCAC +
Preference number: 4 (lower is better)
Translates to: EISVSRRCDVGSYNCQLLGPQPQ*LSSEGH
Trigger: GTGACCCTCAGAGGACAGGCACTGTGGCTGTGGCCC...CAGGAGTTGGCAGTTGTAGCTTCCTACATCACATCTGCGGGAAACGGAAATTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR GCA 90 bp GAAATTTCCGTTTCCCGCAGATGTGATGTAGGAAGCTACAACTGCCAACTCCTGGCCACCAGATGCTGCTaGTCCTTTTCCGCCTGCCGG +
Preference number: 4 (lower is better)
Translates to: EISVSRRCDVGSYNCQLLATRCC*SFSACR
Trigger: CCGGCAGGCGGAAAAGGAGCAGCAGCATCTGGTGGC...CAGGAGTTGGCAGTTGTAGCTTCCTACATCACATCTGCGGGAAACGGAAATTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR GCA 90 bp AATGGGGATCCCAGTGGAGAGAGGGCCAGGGGATTTATTGAGCTAGACACTGCTATCTCAGCCACCAGATaGTGCTGCTCCTTTTCCGCC +
Preference number: 4 (lower is better)
Translates to: NGDPSGERARGFIELDTAISATR*CCSFSA
Trigger: GGCGGAAAAGGAGCAGCAGCATCTGGTGGCTGAGAT...AGCAGTGTCTAGCTCAATAAATCCCCTGGCCCTCTCTCCACTGGGATCCCCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR GCA 90 bp TCTAGGGTAAGCCTGCGCAACAGTGGACTAACAATGGGGATCCCAGTGGAGAGATCTCCACATCGCGAGTaGGCTCAGAGAGGATGGTGT +
Preference number: 4 (lower is better)
Translates to: SRVSLRNSGLTMGIPVERSPHRE*AQRGWC
Trigger: ACACCATCCTCTCTGAGCGCACTCGCGATGTGGAGA...TCTCTCCACTGGGATCCCCATTGTTAGTCCACTGTTGCGCAGGCTTACCCTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR GCA 90 bp TGGATCCCCTGTACTCTATCTAGGGTAAGCCTGCGCAACAGTGGACTAACAATGCGAGACTTAGCTGTGTaGCCACAGCTGCCCTCGCCA +
Preference number: 4 (lower is better)
Translates to: WIPCTLSRVSLRNSGLTMRDLAV*PQLPSP
Trigger: TGGCGAGGGCAGCTGTGGGCACACAGCTAAGTCTCG...CATTGTTAGTCCACTGTTGCGCAGGCTTACCCTAGATAGAGTACAGGGGATCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR CCA 90 bp ACAGGGATGTGGATCCCCTGTACTCTATCTAGGGTAAGCCTGCGCAACAGTGGAAGCCTCCCTCCTTCATaGGGAGGGATGGGAAAAGGA +
Preference number: 4 (lower is better)
Translates to: TGMWIPCTLSRVSLRNSGSLPPS*GGMGKG
Trigger: TCCTTTTCCCATCCCTCCCCATGAAGGAGGGAGGCT...TCCACTGTTGCGCAGGCTTACCCTAGATAGAGTACAGGGGATCCACATCCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447857.8
CDS-3UTR CCA 90 bp AATGGGGATCCCAGTGGAGAGAGGGCCAGGGGATTTATTGAGCTAGACACTGCTCCCCACACAGAGGGTTaGAGAGATCAGCAGTTGCCA +
Preference number: 4 (lower is better)
Translates to: NGDPSGERARGFIELDTAPHTEG*RDQQLP
Trigger: TGGCAACTGCTGATCTCTCCAACCCTCTGTGTGGGG...AGCAGTGTCTAGCTCAATAAATCCCCTGGCCCTCTCTCCACTGGGATCCCCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR CCA 90 bp ACAGGGATGTGGATCCCCTGTACTCTATCTAGGGTAAGCCTGCGCAACAGTGGAGGCCCTCCTCCTGACTaGGACCAGCTTTTTCATCAC +
Preference number: 4 (lower is better)
Translates to: TGMWIPCTLSRVSLRNSGGPPPD*DQLFHH
Trigger: GTGATGAAAAAGCTGGTCCCAGTCAGGAGGAGGGCC...TCCACTGTTGCGCAGGCTTACCCTAGATAGAGTACAGGGGATCCACATCCCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR TCA 90 bp CCTCTGAGGGTCACAAGCTTCGAACGTGGAGTTGAGTATTTGCTCCTCCAAGCTACAGTGCCTGTCCTCTaGGGGTCACAAGCTTCGAAC +
Preference number: 4 (lower is better)
Translates to: PLRVTSFERGVEYLLLQATVPVL*GSQASN
Trigger: GTTCGAAGCTTGTGACCCTCAGAGGACAGGCACTGT...AGCTTGGAGGAGCAAATACTCAACTCCACGTTCGAAGCTTGTGACCCTCAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597993.5
CDS-3UTR TCA 90 bp AATGGGGATCCCAGTGGAGAGAGGGCCAGGGGATTTATTGAGCTAGACACTGCTGGCCAGGGGATTTATTaGGCTAGACACTGCTCTGAG +
Preference number: 4 (lower is better)
Translates to: NGDPSGERARGFIELDTAGQGIY*ARHCSE
Trigger: CTCAGAGCAGTGTCTAGCTCAATAAATCCCCTGGCC...AGCAGTGTCTAGCTCAATAAATCCCCTGGCCCTCTCTCCACTGGGATCCCCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR GCA 90 bp AGGAAGGAAGAAATTTCCGTTTCCCGCAGATGTGATGTAGGAAGCTACAACTGCCATCCAGATGGCAGTTaGCGGGAGGTCAGGGCTCCC +
Preference number: 4 (lower is better)
Translates to: RKEEISVSRRCDVGSYNCHPDGS*REVRAP
Trigger: GGGAGCCCTGACCTCCCGGCAACTGCCATCTGGATG...GCAGTTGTAGCTTCCTACATCACATCTGCGGGAAACGGAAATTTCTTCCTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR CCA 90 bp TGGATCCCCTGTACTCTATCTAGGGTAAGCCTGCGCAACAGTGGACTAACAATGCTGTTGGCCAATGTTTaGAGGCGTGCATCCTGGGGG +
Preference number: 4 (lower is better)
Translates to: WIPCTLSRVSLRNSGLTMLLANV*RRASWG
Trigger: CCCCCAGGATGCACGCCTCCAAACATTGGCCAACAG...CATTGTTAGTCCACTGTTGCGCAGGCTTACCCTAGATAGAGTACAGGGGATCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR CCA 90 bp AGGAAGGAAGAAATTTCCGTTTCCCGCAGATGTGATGTAGGAAGCTACAACTGCGAGGTCAGGGCTCCCTaGAAGGCGGTCTCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: RKEEISVSRRCDVGSYNCEVRAP*KAVSSS
Trigger: GGAAGAGGAGACCGCCTTCCAGGGAGCCCTGACCTC...GCAGTTGTAGCTTCCTACATCACATCTGCGGGAAACGGAAATTTCTTCCTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR CCA 90 bp TGGATCCCCTGTACTCTATCTAGGGTAAGCCTGCGCAACAGTGGACTAACAATGTCAGCAGGTCAGCTGTaGCTTGTAGCTCGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: WIPCTLSRVSLRNSGLTMSAGQL*LVARVW
Trigger: CCAGACCCGAGCTACAAGCCACAGCTGACCTGCTGA...CATTGTTAGTCCACTGTTGCGCAGGCTTACCCTAGATAGAGTACAGGGGATCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR CCA 90 bp TGGATCCCCTGTACTCTATCTAGGGTAAGCCTGCGCAACAGTGGACTAACAATGCCTCATCCATGGCCTTaGCAAACTGCAGGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: WIPCTLSRVSLRNSGLTMPHPWP*QTAGPA
Trigger: AGCAGGCCCTGCAGTTTGCCAAGGCCATGGATGAGG...CATTGTTAGTCCACTGTTGCGCAGGCTTACCCTAGATAGAGTACAGGGGATCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR CCA 90 bp TGGATCCCCTGTACTCTATCTAGGGTAAGCCTGCGCAACAGTGGACTAACAATGGTTCCTCCAGGCTCCTaGCCAGAGTCTTCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: WIPCTLSRVSLRNSGLTMVPPGS*PESSGP
Trigger: AGGACCTGAAGACTCTGGCCAGGAGCCTGGAGGAAC...CATTGTTAGTCCACTGTTGCGCAGGCTTACCCTAGATAGAGTACAGGGGATCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR CCA 90 bp AATGGGGATCCCAGTGGAGAGAGGGCCAGGGGATTTATTGAGCTAGACACTGCTCCTGTTTCTGTCGAATaGCCTCGATCTCCAAGCCCA +
Preference number: 4 (lower is better)
Translates to: NGDPSGERARGFIELDTAPVSVE*PRSPSP
Trigger: TGGGCTTGGAGATCGAGGCCATTCGACAGAAACAGG...AGCAGTGTCTAGCTCAATAAATCCCCTGGCCCTCTCTCCACTGGGATCCCCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447857.8
CDS-3UTR CCA 90 bp TCTAGGGTAAGCCTGCGCAACAGTGGACTAACAATGGGGATCCCAGTGGAGAGATTCTTCAGGGTGCGCTaGCTCTCCCTGGAAGTTTCT +
Preference number: 4 (lower is better)
Translates to: SRVSLRNSGLTMGIPVERFFRVR*LSLEVS
Trigger: AGAAACTTCCAGGGAGAGCCAGCGCACCCTGAAGAA...TCTCTCCACTGGGATCCCCATTGTTAGTCCACTGTTGCGCAGGCTTACCCTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR CCA 90 bp TTTGAATCTACCCACTGCACACTGAGGCTACTGCCTCTCTTTATAAAAAGGAAGGGCACCAGGGCTTGCTaGAGTTCCCGCCGCGCAGGT +
Preference number: 4 (lower is better)
Translates to: FESTHCTLRLLPLFIKRKGTRAC*SSRRAG
Trigger: ACCTGCGCGGCGGGAACTCCAGCAAGCCCTGGTGCC...CTTCCTTTTTATAAAGAGAGGCAGTAGCCTCAGTGTGCAGTGGGTAGATTCAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR CCA 90 bp ATAAAAAGGAAGGAAGAAATTTCCGTTTCCCGCAGATGTGATGTAGGAAGCTACGGGCCAGGTGGGAGGTaGGGACGGGCCAAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: IKRKEEISVSRRCDVGSYGPGGR*GRAKQQ
Trigger: CTGCTGCTTGGCCCGTCCCCACCTCCCACCTGGCCC...GTAGCTTCCTACATCACATCTGCGGGAAACGGAAATTTCTTCCTTCCTTTTTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR CCA 90 bp TGGATCCCCTGTACTCTATCTAGGGTAAGCCTGCGCAACAGTGGACTAACAATGCAATGGGGATCCCAGTaGAGAGAGGGCCAGGGGATT +
Preference number: 4 (lower is better)
Translates to: WIPCTLSRVSLRNSGLTMQWGSQ*REGQGI
Trigger: AATCCCCTGGCCCTCTCTCCACTGGGATCCCCATTG...CATTGTTAGTCCACTGTTGCGCAGGCTTACCCTAGATAGAGTACAGGGGATCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR CCA 90 bp ACAGGGATGTGGATCCCCTGTACTCTATCTAGGGTAAGCCTGCGCAACAGTGGAAAGCCTGCGCAACAGTaGACTAACAATGGGGATCCC +
Preference number: 4 (lower is better)
Translates to: TGMWIPCTLSRVSLRNSGKPAQQ*TNNGDP
Trigger: GGGATCCCCATTGTTAGTCCACTGTTGCGCAGGCTT...TCCACTGTTGCGCAGGCTTACCCTAGATAGAGTACAGGGGATCCACATCCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR TCA 90 bp AATGGGGATCCCAGTGGAGAGAGGGCCAGGGGATTTATTGAGCTAGACACTGCTAATCCCCCATGTAGTTaGCAGGCAGCAATCCAGTCA +
Preference number: 4 (lower is better)
Translates to: NGDPSGERARGFIELDTANPPCS*QAAIQS
Trigger: TGACTGGATTGCTGCCTGTCAACTACATGGGGGATT...AGCAGTGTCTAGCTCAATAAATCCCCTGGCCCTCTCTCCACTGGGATCCCCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR TCA 90 bp AGGAAGGAAGAAATTTCCGTTTCCCGCAGATGTGATGTAGGAAGCTACAACTGCCAGGGAGATCAGCCGTaGCCTGGCTCTCTGCATCCT +
Preference number: 4 (lower is better)
Translates to: RKEEISVSRRCDVGSYNCQGDQP*PGSLHP
Trigger: AGGATGCAGAGAGCCAGGTCACGGCTGATCTCCCTG...GCAGTTGTAGCTTCCTACATCACATCTGCGGGAAACGGAAATTTCTTCCTTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR GCA 90 bp AGGAAGGAAGAAATTTCCGTTTCCCGCAGATGTGATGTAGGAAGCTACAACTGCGCAGGGCCTGCTGGGTaGTGTGAAGCTGCTTACGCA +
Preference number: 4 (lower is better)
Translates to: RKEEISVSRRCDVGSYNCAGPAG*CEAAYA
Trigger: TGCGTAAGCAGCTTCACAGCACCCAGCAGGCCCTGC...GCAGTTGTAGCTTCCTACATCACATCTGCGGGAAACGGAAATTTCTTCCTTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR GCA 90 bp TGGATCCCCTGTACTCTATCTAGGGTAAGCCTGCGCAACAGTGGACTAACAATGTTCCCGTTCTCCTCCTaGAGAGTCTCCATCTCAGCC +
Preference number: 4 (lower is better)
Translates to: WIPCTLSRVSLRNSGLTMFPFSS*RVSISA
Trigger: GGCTGAGATGGAGACTCTGCAGGAGGAGAACGGGAA...CATTGTTAGTCCACTGTTGCGCAGGCTTACCCTAGATAGAGTACAGGGGATCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR GCA 90 bp TGGATCCCCTGTACTCTATCTAGGGTAAGCCTGCGCAACAGTGGACTAACAATGTCTCCACATCGCGAGTaGGCTCAGAGAGGATGGTGT +
Preference number: 4 (lower is better)
Translates to: WIPCTLSRVSLRNSGLTMSPHRE*AQRGWC
Trigger: ACACCATCCTCTCTGAGCGCACTCGCGATGTGGAGA...CATTGTTAGTCCACTGTTGCGCAGGCTTACCCTAGATAGAGTACAGGGGATCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR GCA 90 bp TTTGAATCTACCCACTGCACACTGAGGCTACTGCCTCTCTTTATAAAAAGGAAGACAGGCACCAGGGCTTaGTGGAGTTCCCGCCGCGCA +
Preference number: 4 (lower is better)
Translates to: FESTHCTLRLLPLFIKRKTGTRA*WSSRRA
Trigger: TGCGCGGCGGGAACTCCAGCAAGCCCTGGTGCCTGT...CTTCCTTTTTATAAAGAGAGGCAGTAGCCTCAGTGTGCAGTGGGTAGATTCAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR GCA 90 bp TCTAGGGTAAGCCTGCGCAACAGTGGACTAACAATGGGGATCCCAGTGGAGAGAGTAGGAAGCTACAACTaGCAACTCCTGAGCATGAGG +
Preference number: 4 (lower is better)
Translates to: SRVSLRNSGLTMGIPVERVGSYN*QLLSMR
Trigger: CCTCATGCTCAGGAGTTGGCAGTTGTAGCTTCCTAC...TCTCTCCACTGGGATCCCCATTGTTAGTCCACTGTTGCGCAGGCTTACCCTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR CCA 90 bp AGGAAGGAAGAAATTTCCGTTTCCCGCAGATGTGATGTAGGAAGCTACAACTGCCTTGTAGCTCGGGTCTaGGGTCTTCGCCTCCGAAGC +
Preference number: 4 (lower is better)
Translates to: RKEEISVSRRCDVGSYNCLVARV*GLRLRS
Trigger: GCTTCGGAGGCGAAGACCCCAGACCCGAGCTACAAG...GCAGTTGTAGCTTCCTACATCACATCTGCGGGAAACGGAAATTTCTTCCTTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR CCA 90 bp GAAATTTCCGTTTCCCGCAGATGTGATGTAGGAAGCTACAACTGCCAACTCCTGCCTCATCCATGGCCTTaGCAAACTGCAGGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: EISVSRRCDVGSYNCQLLPHPWP*QTAGPA
Trigger: AGCAGGCCCTGCAGTTTGCCAAGGCCATGGATGAGG...CAGGAGTTGGCAGTTGTAGCTTCCTACATCACATCTGCGGGAAACGGAAATTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR CCA 90 bp TCTAGGGTAAGCCTGCGCAACAGTGGACTAACAATGGGGATCCCAGTGGAGAGAAAGTGTCCTTCTCCATaGCCAGCTCCTGACTTCTCT +
Preference number: 4 (lower is better)
Translates to: SRVSLRNSGLTMGIPVERKCPSP*PAPDFS
Trigger: AGAGAAGTCAGGAGCTGGCCATGGAGAAGGACACTT...TCTCTCCACTGGGATCCCCATTGTTAGTCCACTGTTGCGCAGGCTTACCCTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR CCA 90 bp ACAGGGATGTGGATCCCCTGTACTCTATCTAGGGTAAGCCTGCGCAACAGTGGACCTCTTCCTCTCTTCTaGTCAACCACATGGATGGCT +
Preference number: 4 (lower is better)
Translates to: TGMWIPCTLSRVSLRNSGPLPLF*STTWMA
Trigger: AGCCATCCATGTGGTTGACCAGAAGAGAGGAAGAGG...TCCACTGTTGCGCAGGCTTACCCTAGATAGAGTACAGGGGATCCACATCCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR CCA 90 bp GAAATTTCCGTTTCCCGCAGATGTGATGTAGGAAGCTACAACTGCCAACTCCTGCCGCGCAGGTCTCTCTaGAGGGTTTTCTGGGATGTC +
Preference number: 4 (lower is better)
Translates to: EISVSRRCDVGSYNCQLLPRRSL*RVFWDV
Trigger: GACATCCCAGAAAACCCTCCAGAGAGACCTGCGCGG...CAGGAGTTGGCAGTTGTAGCTTCCTACATCACATCTGCGGGAAACGGAAATTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR CCA 90 bp TGGATCCCCTGTACTCTATCTAGGGTAAGCCTGCGCAACAGTGGACTAACAATGGGCCCTCCTCCTGACTaGGACCAGCTTTTTCATCAC +
Preference number: 4 (lower is better)
Translates to: WIPCTLSRVSLRNSGLTMGPPPD*DQLFHH
Trigger: GTGATGAAAAAGCTGGTCCCAGTCAGGAGGAGGGCC...CATTGTTAGTCCACTGTTGCGCAGGCTTACCCTAGATAGAGTACAGGGGATCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR CCA 90 bp TGGATCCCCTGTACTCTATCTAGGGTAAGCCTGCGCAACAGTGGACTAACAATGCCACTTCCTGTCGAATaGCCTCGATCTCCAAGCCCA +
Preference number: 4 (lower is better)
Translates to: WIPCTLSRVSLRNSGLTMPLPVE*PRSPSP
Trigger: TGGGCTTGGAGATCGAGGCCATTCGACAGGAAGTGG...CATTGTTAGTCCACTGTTGCGCAGGCTTACCCTAGATAGAGTACAGGGGATCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600570.1
CDS-3UTR TCA 90 bp ATAAAAAGGAAGGAAGAAATTTCCGTTTCCCGCAGATGTGATGTAGGAAGCTACCCAGACGTCGGTTGCTaGGCTCCAGGTCCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: IKRKEEISVSRRCDVGSYPDVGC*APGPPG
Trigger: GCCTGGAGGACCTGGAGCTCAGCAACCGACGTCTGG...GTAGCTTCCTACATCACATCTGCGGGAAACGGAAATTTCTTCCTTCCTTTTTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR TCA 90 bp ATAAAAAGGAAGGAAGAAATTTCCGTTTCCCGCAGATGTGATGTAGGAAGCTACCTCCCCAAGGCGTGCTaGCCCCTCCTCAGCTGTCTC +
Preference number: 4 (lower is better)
Translates to: IKRKEEISVSRRCDVGSYLPKAC*PLLSCL
Trigger: GAGACAGCTGAGGAGGGGTCAGCACGCCTTGGGGAG...GTAGCTTCCTACATCACATCTGCGGGAAACGGAAATTTCTTCCTTCCTTTTTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR TCA 90 bp TGGATCCCCTGTACTCTATCTAGGGTAAGCCTGCGCAACAGTGGACTAACAATGGGCCAGGGGATTTATTaGGCTAGACACTGCTCTGAG +
Preference number: 4 (lower is better)
Translates to: WIPCTLSRVSLRNSGLTMGQGIY*ARHCSE
Trigger: CTCAGAGCAGTGTCTAGCTCAATAAATCCCCTGGCC...CATTGTTAGTCCACTGTTGCGCAGGCTTACCCTAGATAGAGTACAGGGGATCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR TCA 90 bp TGGATCCCCTGTACTCTATCTAGGGTAAGCCTGCGCAACAGTGGACTAACAATGCTACCCACTGCACACTaGGGCTACTGCCTCTCTTTA +
Preference number: 4 (lower is better)
Translates to: WIPCTLSRVSLRNSGLTMLPTAH*GYCLSL
Trigger: TAAAGAGAGGCAGTAGCCTCAGTGTGCAGTGGGTAG...CATTGTTAGTCCACTGTTGCGCAGGCTTACCCTAGATAGAGTACAGGGGATCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR GCA 90 bp GAAATTTCCGTTTCCCGCAGATGTGATGTAGGAAGCTACAACTGCCAACTCCTGATCTCAGCCACCAGATaGTGCTGCTCCTTTTCCGCC +
Preference number: 4 (lower is better)
Translates to: EISVSRRCDVGSYNCQLLISATR*CCSFSA
Trigger: GGCGGAAAAGGAGCAGCAGCATCTGGTGGCTGAGAT...CAGGAGTTGGCAGTTGTAGCTTCCTACATCACATCTGCGGGAAACGGAAATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR GCA 90 bp TCTAGGGTAAGCCTGCGCAACAGTGGACTAACAATGGGGATCCCAGTGGAGAGATTTGAATCTACCCACTaGACACTGAGGCTACTGCCT +
Preference number: 4 (lower is better)
Translates to: SRVSLRNSGLTMGIPVERFESTH*TLRLLP
Trigger: AGGCAGTAGCCTCAGTGTGCAGTGGGTAGATTCAAA...TCTCTCCACTGGGATCCCCATTGTTAGTCCACTGTTGCGCAGGCTTACCCTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR CCA 90 bp ATAAAAAGGAAGGAAGAAATTTCCGTTTCCCGCAGATGTGATGTAGGAAGCTACGGTACATTTCCGCAGTaGGGCCACCCACCGGGCCCT +
Preference number: 4 (lower is better)
Translates to: IKRKEEISVSRRCDVGSYGTFPQ*GHPPGP
Trigger: AGGGCCCGGTGGGTGGCCCCACTGCGGAAATGTACC...GTAGCTTCCTACATCACATCTGCGGGAAACGGAAATTTCTTCCTTCCTTTTTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447857.8
CDS-3UTR CCA 90 bp AGGAAGGAAGAAATTTCCGTTTCCCGCAGATGTGATGTAGGAAGCTACAACTGCTTCTGGGCATCCAGATaGCAGTTGCCGGGAGGTCAG +
Preference number: 4 (lower is better)
Translates to: RKEEISVSRRCDVGSYNCFWASR*QLPGGQ
Trigger: CTGACCTCCCGGCAACTGCCATCTGGATGCCCAGAA...GCAGTTGTAGCTTCCTACATCACATCTGCGGGAAACGGAAATTTCTTCCTTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR CCA 90 bp TCTAGGGTAAGCCTGCGCAACAGTGGACTAACAATGGGGATCCCAGTGGAGAGAAGCTGGGGCTTCAGATaGAAACTCAGTTTCCTCACT +
Preference number: 4 (lower is better)
Translates to: SRVSLRNSGLTMGIPVERSWGFR*KLSFLT
Trigger: AGTGAGGAAACTGAGTTTCCATCTGAAGCCCCAGCT...TCTCTCCACTGGGATCCCCATTGTTAGTCCACTGTTGCGCAGGCTTACCCTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR CCA 90 bp GAAATTTCCGTTTCCCGCAGATGTGATGTAGGAAGCTACAACTGCCAACTCCTGAGATCAGCCGTGACCTaGCTCTCTGCATCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: EISVSRRCDVGSYNCQLLRSAVT*LSASSS
Trigger: AGAGGAGGATGCAGAGAGCCAGGTCACGGCTGATCT...CAGGAGTTGGCAGTTGTAGCTTCCTACATCACATCTGCGGGAAACGGAAATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR CCA 90 bp TGGATCCCCTGTACTCTATCTAGGGTAAGCCTGCGCAACAGTGGACTAACAATGAGGAGCTGGGATCAGTaGATGTCGAGTGACTCTGAG +
Preference number: 4 (lower is better)
Translates to: WIPCTLSRVSLRNSGLTMRSWDQ*MSSDSE
Trigger: CTCAGAGTCACTCGACATCCACTGATCCCAGCTCCT...CATTGTTAGTCCACTGTTGCGCAGGCTTACCCTAGATAGAGTACAGGGGATCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR CCA 90 bp GTGGAGTTGAGTATTTGCTCCTCCAAGCTGACCGGCATTCCCAGCCTTGCCTCCTCTTCCTCTGGAAAATaGGGTTGGTGTTACCTCTTT +
Preference number: 4 (lower is better)
Translates to: VELSICSSKLTGIPSLASSSSGK*GWCYLF
Trigger: AAAGAGGTAACACCAACCCCATTTTCCAGAGGAAGA...GGAGGCAAGGCTGGGAATGCCGGTCAGCTTGGAGGAGCAAATACTCAACTCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597993.5
CDS-3UTR TCA 90 bp AGGAAGGAAGAAATTTCCGTTTCCCGCAGATGTGATGTAGGAAGCTACAACTGCACAGTGCCTGTCCTCTaGGGGTCACAAGCTTCGAAC +
Preference number: 4 (lower is better)
Translates to: RKEEISVSRRCDVGSYNCTVPVL*GSQASN
Trigger: GTTCGAAGCTTGTGACCCTCAGAGGACAGGCACTGT...GCAGTTGTAGCTTCCTACATCACATCTGCGGGAAACGGAAATTTCTTCCTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR TCA 90 bp TGGATCCCCTGTACTCTATCTAGGGTAAGCCTGCGCAACAGTGGACTAACAATGTCCATGGCCAGCTCCTaGCTTCTCTTTTTCACTCCA +
Preference number: 4 (lower is better)
Translates to: WIPCTLSRVSLRNSGLTMSMASS*LLFFTP
Trigger: TGGAGTGAAAAAGAGAAGTCAGGAGCTGGCCATGGA...CATTGTTAGTCCACTGTTGCGCAGGCTTACCCTAGATAGAGTACAGGGGATCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR TCA 90 bp AGGAAGGAAGAAATTTCCGTTTCCCGCAGATGTGATGTAGGAAGCTACAACTGCCACTGGTCTCATGGATaGCTTCCTCCCACTGCCACA +
Preference number: 4 (lower is better)
Translates to: RKEEISVSRRCDVGSYNCHWSHG*LPPTAT
Trigger: TGTGGCAGTGGGAGGAAGTCATCCATGAGACCAGTG...GCAGTTGTAGCTTCCTACATCACATCTGCGGGAAACGGAAATTTCTTCCTTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR TCA 90 bp TGGATCCCCTGTACTCTATCTAGGGTAAGCCTGCGCAACAGTGGACTAACAATGCGTTTCCCGCAGATGTaGTGTAGGAAGCTACAACTG +
Preference number: 4 (lower is better)
Translates to: WIPCTLSRVSLRNSGLTMRFPQM*CRKLQL
Trigger: CAGTTGTAGCTTCCTACATCACATCTGCGGGAAACG...CATTGTTAGTCCACTGTTGCGCAGGCTTACCCTAGATAGAGTACAGGGGATCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR CCA 90 bp ATAAAAAGGAAGGAAGAAATTTCCGTTTCCCGCAGATGTGATGTAGGAAGCTACGAGGTCAGGGCTCCCTaGAAGGCGGTCTCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: IKRKEEISVSRRCDVGSYEVRAP*KAVSSS
Trigger: GGAAGAGGAGACCGCCTTCCAGGGAGCCCTGACCTC...GTAGCTTCCTACATCACATCTGCGGGAAACGGAAATTTCTTCCTTCCTTTTTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR CCA 90 bp AGGAAGGAAGAAATTTCCGTTTCCCGCAGATGTGATGTAGGAAGCTACAACTGCTGGCTCCTCAGCTTCTaGGCATCCAGATGGCAGTTG +
Preference number: 4 (lower is better)
Translates to: RKEEISVSRRCDVGSYNCWLLSF*ASRWQL
Trigger: CAACTGCCATCTGGATGCCCAGAAGCTGAGGAGCCA...GCAGTTGTAGCTTCCTACATCACATCTGCGGGAAACGGAAATTTCTTCCTTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR CCA 90 bp TTTGAATCTACCCACTGCACACTGAGGCTACTGCCTCTCTTTATAAAAAGGAAGCTTGTAGCTCGGGTCTaGGGTCTTCGCCTCCGAAGC +
Preference number: 4 (lower is better)
Translates to: FESTHCTLRLLPLFIKRKLVARV*GLRLRS
Trigger: GCTTCGGAGGCGAAGACCCCAGACCCGAGCTACAAG...CTTCCTTTTTATAAAGAGAGGCAGTAGCCTCAGTGTGCAGTGGGTAGATTCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR CCA 90 bp AATGGGGATCCCAGTGGAGAGAGGGCCAGGGGATTTATTGAGCTAGACACTGCTAGGATGGTGTCTCTTTaGCAAATGAGGTGTTCACAC +
Preference number: 4 (lower is better)
Translates to: NGDPSGERARGFIELDTARMVSL*QMRCSH
Trigger: GTGTGAACACCTCATTTGCCAAAGAGACACCATCCT...AGCAGTGTCTAGCTCAATAAATCCCCTGGCCCTCTCTCCACTGGGATCCCCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR CCA 90 bp AGGAGAATCACTGAGGCCCTGACCCCAAGGCAACCGAGACTTAGCTGTGTGCCCTGCTTAATCCATTACTaGGGGAGTTTTGCTATTGTT +
Preference number: 4 (lower is better)
Translates to: RRITEALTPRQPRLSCVPCLIHY*GSFAIV
Trigger: AACAATAGCAAAACTCCCCCAGTAATGGATTAAGCA...GGGCACACAGCTAAGTCTCGGTTGCCTTGGGGTCAGGGCCTCAGTGATTCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR TCA 90 bp GAAATTTCCGTTTCCCGCAGATGTGATGTAGGAAGCTACAACTGCCAACTCCTGTCCATGGCCAGCTCCTaGCTTCTCTTTTTCACTCCA +
Preference number: 4 (lower is better)
Translates to: EISVSRRCDVGSYNCQLLSMASS*LLFFTP
Trigger: TGGAGTGAAAAAGAGAAGTCAGGAGCTGGCCATGGA...CAGGAGTTGGCAGTTGTAGCTTCCTACATCACATCTGCGGGAAACGGAAATTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR TCA 90 bp TCTAGGGTAAGCCTGCGCAACAGTGGACTAACAATGGGGATCCCAGTGGAGAGATGTCTCTTTGGCAAATaGGGTGTTCACACTCAAAGA +
Preference number: 4 (lower is better)
Translates to: SRVSLRNSGLTMGIPVERCLFGK*GVHTQR
Trigger: TCTTTGAGTGTGAACACCTCATTTGCCAAAGAGACA...TCTCTCCACTGGGATCCCCATTGTTAGTCCACTGTTGCGCAGGCTTACCCTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR GCA 90 bp TTTGAATCTACCCACTGCACACTGAGGCTACTGCCTCTCTTTATAAAAAGGAAGCTTGGGCCAGAAGGCTaGGATTCTGTTCCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: FESTHCTLRLLPLFIKRKLGPEG*DSVPPG
Trigger: GCCTGGAGGAACAGAATCGCAGCCTTCTGGCCCAAG...CTTCCTTTTTATAAAGAGAGGCAGTAGCCTCAGTGTGCAGTGGGTAGATTCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR GCA 90 bp TTTGAATCTACCCACTGCACACTGAGGCTACTGCCTCTCTTTATAAAAAGGAAGTCAGCCACCAGATGCTaGTGCTCCTTTTCCGCCTGC +
Preference number: 4 (lower is better)
Translates to: FESTHCTLRLLPLFIKRKSATRC*CSFSAC
Trigger: GCAGGCGGAAAAGGAGCAGCAGCATCTGGTGGCTGA...CTTCCTTTTTATAAAGAGAGGCAGTAGCCTCAGTGTGCAGTGGGTAGATTCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR GCA 90 bp GAAATTTCCGTTTCCCGCAGATGTGATGTAGGAAGCTACAACTGCCAACTCCTGTCCAGCCTCAGTTCCTaGGTCGTCACTCTGTATTCT +
Preference number: 4 (lower is better)
Translates to: EISVSRRCDVGSYNCQLLSSLSS*VVTLYS
Trigger: AGAATACAGAGTGACGACGCAGGAACTGAGGCTGGA...CAGGAGTTGGCAGTTGTAGCTTCCTACATCACATCTGCGGGAAACGGAAATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR GCA 90 bp GAAATTTCCGTTTCCCGCAGATGTGATGTAGGAAGCTACAACTGCCAACTCCTGGGAGAGATCAGCAGTTaGCACTTCCTGTTTCTGTCG +
Preference number: 4 (lower is better)
Translates to: EISVSRRCDVGSYNCQLLGEISS*HFLFLS
Trigger: CGACAGAAACAGGAAGTGGCAACTGCTGATCTCTCC...CAGGAGTTGGCAGTTGTAGCTTCCTACATCACATCTGCGGGAAACGGAAATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447857.8
CDS-3UTR GCA 90 bp TTTGAATCTACCCACTGCACACTGAGGCTACTGCCTCTCTTTATAAAAAGGAAGCTGTGTGCCCACAGCTaGCCTCGCCAGGCTTGTTTT +
Preference number: 4 (lower is better)
Translates to: FESTHCTLRLLPLFIKRKLCAHS*PRQACF
Trigger: AAAACAAGCCTGGCGAGGGCAGCTGTGGGCACACAG...CTTCCTTTTTATAAAGAGAGGCAGTAGCCTCAGTGTGCAGTGGGTAGATTCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR GCA 90 bp GAAATTTCCGTTTCCCGCAGATGTGATGTAGGAAGCTACAACTGCCAACTCCTGGTAGGAAGCTACAACTaGCAACTCCTGAGCATGAGG +
Preference number: 4 (lower is better)
Translates to: EISVSRRCDVGSYNCQLLVGSYN*QLLSMR
Trigger: CCTCATGCTCAGGAGTTGGCAGTTGTAGCTTCCTAC...CAGGAGTTGGCAGTTGTAGCTTCCTACATCACATCTGCGGGAAACGGAAATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR CCA 90 bp AGGCAACTGCTTCTCTTTTATTATGAATATGATTTGAATCTACCCACTGCACACTGGAGGCGTGCATCCTaGGGGCCCTGGCCTGTCACA +
Preference number: 4 (lower is better)
Translates to: RQLLLFYYEYDLNLPTAHWRRAS*GPWPVT
Trigger: TGTGACAGGCCAGGGCCCCCAGGATGCACGCCTCCA...GTGTGCAGTGGGTAGATTCAAATCATATTCATAATAAAAGAGAAGCAGTTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR CCA 90 bp TTTGAATCTACCCACTGCACACTGAGGCTACTGCCTCTCTTTATAAAAAGGAAGTGGGGTCCAGGCTGTTaGCCAATGTTTGGAGGCGTG +
Preference number: 4 (lower is better)
Translates to: FESTHCTLRLLPLFIKRKWGPGC*PMFGGV
Trigger: CACGCCTCCAAACATTGGCCAACAGCCTGGACCCCA...CTTCCTTTTTATAAAGAGAGGCAGTAGCCTCAGTGTGCAGTGGGTAGATTCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR CCA 90 bp TTTGAATCTACCCACTGCACACTGAGGCTACTGCCTCTCTTTATAAAAAGGAAGGTTCCTCCAGGCTCCTaGCCAGAGTCTTCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: FESTHCTLRLLPLFIKRKVPPGS*PESSGP
Trigger: AGGACCTGAAGACTCTGGCCAGGAGCCTGGAGGAAC...CTTCCTTTTTATAAAGAGAGGCAGTAGCCTCAGTGTGCAGTGGGTAGATTCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR CCA 90 bp TGGATCCCCTGTACTCTATCTAGGGTAAGCCTGCGCAACAGTGGACTAACAATGAGCTGGGGCTTCAGATaGAAACTCAGTTTCCTCACT +
Preference number: 4 (lower is better)
Translates to: WIPCTLSRVSLRNSGLTMSWGFR*KLSFLT
Trigger: AGTGAGGAAACTGAGTTTCCATCTGAAGCCCCAGCT...CATTGTTAGTCCACTGTTGCGCAGGCTTACCCTAGATAGAGTACAGGGGATCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR TCA 90 bp AGGCAACTGCTTCTCTTTTATTATGAATATGATTTGAATCTACCCACTGCACACGCCTGCTGGGTGCTGTaGAGCTGCTTACGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: RQLLLFYYEYDLNLPTAHACWVL*SCLRRA
Trigger: GGCTCTGCGTAAGCAGCTTCACAGCACCCAGCAGGC...GTGTGCAGTGGGTAGATTCAAATCATATTCATAATAAAAGAGAAGCAGTTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR GCA 90 bp AGGCAACTGCTTCTCTTTTATTATGAATATGATTTGAATCTACCCACTGCACACCAATGTTTGGAGGCGTaGATCCTGGGGGCCCTGGCC +
Preference number: 4 (lower is better)
Translates to: RQLLLFYYEYDLNLPTAHQCLEA*ILGALA
Trigger: GGCCAGGGCCCCCAGGATGCACGCCTCCAAACATTG...GTGTGCAGTGGGTAGATTCAAATCATATTCATAATAAAAGAGAAGCAGTTGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR GCA 90 bp AGGCAACTGCTTCTCTTTTATTATGAATATGATTTGAATCTACCCACTGCACACCCAGGTCCTCCAGGCTaGTCAGCAGGTCAGCTGTGG +
Preference number: 4 (lower is better)
Translates to: RQLLLFYYEYDLNLPTAHPGPPG*SAGQLW
Trigger: CCACAGCTGACCTGCTGAGCAGCCTGGAGGACCTGG...GTGTGCAGTGGGTAGATTCAAATCATATTCATAATAAAAGAGAAGCAGTTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR GCA 90 bp AGGCAACTGCTTCTCTTTTATTATGAATATGATTTGAATCTACCCACTGCACACTGCTCCTTTTCCGCCTaGCGGGCTTGGGCCAGAAGG +
Preference number: 4 (lower is better)
Translates to: RQLLLFYYEYDLNLPTAHCSFSA*RAWARR
Trigger: CCTTCTGGCCCAAGCCCGGCAGGCGGAAAAGGAGCA...GTGTGCAGTGGGTAGATTCAAATCATATTCATAATAAAAGAGAAGCAGTTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR CCA 90 bp ATAAAAAGGAAGGAAGAAATTTCCGTTTCCCGCAGATGTGATGTAGGAAGCTACTCAGCAGGTCAGCTGTaGCTTGTAGCTCGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: IKRKEEISVSRRCDVGSYSAGQL*LVARVW
Trigger: CCAGACCCGAGCTACAAGCCACAGCTGACCTGCTGA...GTAGCTTCCTACATCACATCTGCGGGAAACGGAAATTTCTTCCTTCCTTTTTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR CCA 90 bp TTTGAATCTACCCACTGCACACTGAGGCTACTGCCTCTCTTTATAAAAAGGAAGCCCCACACAGAGGGTTaGAGAGATCAGCAGTTGCCA +
Preference number: 4 (lower is better)
Translates to: FESTHCTLRLLPLFIKRKPHTEG*RDQQLP
Trigger: TGGCAACTGCTGATCTCTCCAACCCTCTGTGTGGGG...CTTCCTTTTTATAAAGAGAGGCAGTAGCCTCAGTGTGCAGTGGGTAGATTCAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR CCA 90 bp AGGAAGGAAGAAATTTCCGTTTCCCGCAGATGTGATGTAGGAAGCTACAACTGCCCTCTTCCTCTCTTCTaGTCAACCACATGGATGGCT +
Preference number: 4 (lower is better)
Translates to: RKEEISVSRRCDVGSYNCPLPLF*STTWMA
Trigger: AGCCATCCATGTGGTTGACCAGAAGAGAGGAAGAGG...GCAGTTGTAGCTTCCTACATCACATCTGCGGGAAACGGAAATTTCTTCCTTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR GCA 90 bp TTTGAATCTACCCACTGCACACTGAGGCTACTGCCTCTCTTTATAAAAAGGAAGCCTCAGCTGTCTCCATaGTCCGCTGCAATTTGGCAT +
Preference number: 4 (lower is better)
Translates to: FESTHCTLRLLPLFIKRKPQLSP*SAAIWH
Trigger: ATGCCAAATTGCAGCGGAGCATGGAGACAGCTGAGG...CTTCCTTTTTATAAAGAGAGGCAGTAGCCTCAGTGTGCAGTGGGTAGATTCAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR GCA 90 bp AGGAAGGAAGAAATTTCCGTTTCCCGCAGATGTGATGTAGGAAGCTACAACTGCTCACACTCAAAGAGCTaGCGCTTCAAAGTGTCCTTC +
Preference number: 4 (lower is better)
Translates to: RKEEISVSRRCDVGSYNCSHSKS*RFKVSF
Trigger: GAAGGACACTTTGAAGCGGCAGCTCTTTGAGTGTGA...GCAGTTGTAGCTTCCTACATCACATCTGCGGGAAACGGAAATTTCTTCCTTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR CCA 90 bp ATAAAAAGGAAGGAAGAAATTTCCGTTTCCCGCAGATGTGATGTAGGAAGCTACAGATCAGCCGTGACCTaGCTCTCTGCATCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: IKRKEEISVSRRCDVGSYRSAVT*LSASSS
Trigger: AGAGGAGGATGCAGAGAGCCAGGTCACGGCTGATCT...GTAGCTTCCTACATCACATCTGCGGGAAACGGAAATTTCTTCCTTCCTTTTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR TCA 90 bp TTTGAATCTACCCACTGCACACTGAGGCTACTGCCTCTCTTTATAAAAAGGAAGCTTCGAACGTGGAGTTaGGTATTTGCTCCTCCAAGC +
Preference number: 4 (lower is better)
Translates to: FESTHCTLRLLPLFIKRKLRTWS*VFAPPS
Trigger: GCTTGGAGGAGCAAATACTCAACTCCACGTTCGAAG...CTTCCTTTTTATAAAGAGAGGCAGTAGCCTCAGTGTGCAGTGGGTAGATTCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447857.8
CDS-3UTR GCA 90 bp ATAAAAAGGAAGGAAGAAATTTCCGTTTCCCGCAGATGTGATGTAGGAAGCTACGTGGAGTTGAGTATTTaGTCCTCCAAGCTGACCGGC +
Preference number: 4 (lower is better)
Translates to: IKRKEEISVSRRCDVGSYVELSI*SSKLTG
Trigger: GCCGGTCAGCTTGGAGGAGCAAATACTCAACTCCAC...GTAGCTTCCTACATCACATCTGCGGGAAACGGAAATTTCTTCCTTCCTTTTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447857.8
CDS-3UTR GCA 90 bp ATAAAAAGGAAGGAAGAAATTTCCGTTTCCCGCAGATGTGATGTAGGAAGCTACGTCTCCATGCTCCGCTaGAATTTGGCATTCTCCCCA +
Preference number: 4 (lower is better)
Translates to: IKRKEEISVSRRCDVGSYVSMLR*NLAFSP
Trigger: TGGGGAGAATGCCAAATTGCAGCGGAGCATGGAGAC...GTAGCTTCCTACATCACATCTGCGGGAAACGGAAATTTCTTCCTTCCTTTTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR GCA 90 bp ATAAAAAGGAAGGAAGAAATTTCCGTTTCCCGCAGATGTGATGTAGGAAGCTACCCTCAGCTGTCTCCATaGTCCGCTGCAATTTGGCAT +
Preference number: 4 (lower is better)
Translates to: IKRKEEISVSRRCDVGSYPQLSP*SAAIWH
Trigger: ATGCCAAATTGCAGCGGAGCATGGAGACAGCTGAGG...GTAGCTTCCTACATCACATCTGCGGGAAACGGAAATTTCTTCCTTCCTTTTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR GCA 90 bp AGGCAACTGCTTCTCTTTTATTATGAATATGATTTGAATCTACCCACTGCACACTCAGCCACCAGATGCTaGTGCTCCTTTTCCGCCTGC +
Preference number: 4 (lower is better)
Translates to: RQLLLFYYEYDLNLPTAHSATRC*CSFSAC
Trigger: GCAGGCGGAAAAGGAGCAGCAGCATCTGGTGGCTGA...GTGTGCAGTGGGTAGATTCAAATCATATTCATAATAAAAGAGAAGCAGTTGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR CCA 90 bp AGGCAACTGCTTCTCTTTTATTATGAATATGATTTGAATCTACCCACTGCACACCTTCATGGGGAGGGATaGGAAAAGGACCAGCTGGCC +
Preference number: 4 (lower is better)
Translates to: RQLLLFYYEYDLNLPTAHLHGEG*EKDQLA
Trigger: GGCCAGCTGGTCCTTTTCCCATCCCTCCCCATGAAG...GTGTGCAGTGGGTAGATTCAAATCATATTCATAATAAAAGAGAAGCAGTTGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000447857.8
CDS-3UTR CCA 90 bp AGGCAACTGCTTCTCTTTTATTATGAATATGATTTGAATCTACCCACTGCACACTGGGGTCCAGGCTGTTaGCCAATGTTTGGAGGCGTG +
Preference number: 4 (lower is better)
Translates to: RQLLLFYYEYDLNLPTAHWGPGC*PMFGGV
Trigger: CACGCCTCCAAACATTGGCCAACAGCCTGGACCCCA...GTGTGCAGTGGGTAGATTCAAATCATATTCATAATAAAAGAGAAGCAGTTGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR CCA 90 bp ATAAAAAGGAAGGAAGAAATTTCCGTTTCCCGCAGATGTGATGTAGGAAGCTACTGCTCCGCTGCAATTTaGCATTCTCCCCAACCAGAC +
Preference number: 4 (lower is better)
Translates to: IKRKEEISVSRRCDVGSYCSAAI*HSPQPD
Trigger: GTCTGGTTGGGGAGAATGCCAAATTGCAGCGGAGCA...GTAGCTTCCTACATCACATCTGCGGGAAACGGAAATTTCTTCCTTCCTTTTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR TCA 90 bp ATAAAAAGGAAGGAAGAAATTTCCGTTTCCCGCAGATGTGATGTAGGAAGCTACCGTTTCCCGCAGATGTaGTGTAGGAAGCTACAACTG +
Preference number: 4 (lower is better)
Translates to: IKRKEEISVSRRCDVGSYRFPQM*CRKLQL
Trigger: CAGTTGTAGCTTCCTACATCACATCTGCGGGAAACG...GTAGCTTCCTACATCACATCTGCGGGAAACGGAAATTTCTTCCTTCCTTTTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR CCA 90 bp GAAATTTCCGTTTCCCGCAGATGTGATGTAGGAAGCTACAACTGCCAACTCCTGAAAAATACAGGGATGTaGATCCCCTGTACTCTATCT +
Preference number: 4 (lower is better)
Translates to: EISVSRRCDVGSYNCQLLKNTGM*IPCTLS
Trigger: AGATAGAGTACAGGGGATCCACATCCCTGTATTTTT...CAGGAGTTGGCAGTTGTAGCTTCCTACATCACATCTGCGGGAAACGGAAATTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR GCA 90 bp AGGCAACTGCTTCTCTTTTATTATGAATATGATTTGAATCTACCCACTGCACACGTCTCCATGCTCCGCTaGAATTTGGCATTCTCCCCA +
Preference number: 4 (lower is better)
Translates to: RQLLLFYYEYDLNLPTAHVSMLR*NLAFSP
Trigger: TGGGGAGAATGCCAAATTGCAGCGGAGCATGGAGAC...GTGTGCAGTGGGTAGATTCAAATCATATTCATAATAAAAGAGAAGCAGTTGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR GCA 90 bp ATAAAAAGGAAGGAAGAAATTTCCGTTTCCCGCAGATGTGATGTAGGAAGCTACTCACACTCAAAGAGCTaGCGCTTCAAAGTGTCCTTC +
Preference number: 4 (lower is better)
Translates to: IKRKEEISVSRRCDVGSYSHSKS*RFKVSF
Trigger: GAAGGACACTTTGAAGCGGCAGCTCTTTGAGTGTGA...GTAGCTTCCTACATCACATCTGCGGGAAACGGAAATTTCTTCCTTCCTTTTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR TCA 90 bp AGGCAACTGCTTCTCTTTTATTATGAATATGATTTGAATCTACCCACTGCACACAATCCCCCATGTAGTTaGCAGGCAGCAATCCAGTCA +
Preference number: 4 (lower is better)
Translates to: RQLLLFYYEYDLNLPTAHNPPCS*QAAIQS
Trigger: TGACTGGATTGCTGCCTGTCAACTACATGGGGGATT...GTGTGCAGTGGGTAGATTCAAATCATATTCATAATAAAAGAGAAGCAGTTGCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR TCA 90 bp TTTGAATCTACCCACTGCACACTGAGGCTACTGCCTCTCTTTATAAAAAGGAAGTGTCTCTTTGGCAAATaGGGTGTTCACACTCAAAGA +
Preference number: 4 (lower is better)
Translates to: FESTHCTLRLLPLFIKRKCLFGK*GVHTQR
Trigger: TCTTTGAGTGTGAACACCTCATTTGCCAAAGAGACA...CTTCCTTTTTATAAAGAGAGGCAGTAGCCTCAGTGTGCAGTGGGTAGATTCAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR CCA 90 bp AGGCAACTGCTTCTCTTTTATTATGAATATGATTTGAATCTACCCACTGCACACAGGATGGTGTCTCTTTaGCAAATGAGGTGTTCACAC +
Preference number: 4 (lower is better)
Translates to: RQLLLFYYEYDLNLPTAHRMVSL*QMRCSH
Trigger: GTGTGAACACCTCATTTGCCAAAGAGACACCATCCT...GTGTGCAGTGGGTAGATTCAAATCATATTCATAATAAAAGAGAAGCAGTTGCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS GCA 90 bp CGGGCCCTCGGGCAGGTCCATGGGCCACCCCTGCCGCGGCGCAGCTaGTGGCAAAGCTACCAGCCTCCCTCCTTCATGGGGAGGGATGGG +
Preference number: 5 (lower is better)
Translates to: RALGQVHGPPLPRRS*WQSYQPPSFMGRDG
Trigger: CCCATCCCTCCCCATGAAGGAGGGAGGCTGGTAGCTTTGCCAGCAGCTGCGCCGCGGCAGGGGTGGCCCATGGACCTGCCCGAGGGCCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000447857.8
ENST00000593725.5
ENST00000594043.5
ENST00000594905.5
ENST00000595828.5
ENST00000596771.5
ENST00000596862.5
ENST00000597993.5
ENST00000598730.5
CDS-3UTR CAA 90 bp TGCTCCTCCAAGCTGACCGGCATTCCCAGCCTTGCCTCCTCAGGCCGCTCCCGGCCGGCATTCCCAGCCTaGCCTCCTCAGGCCGCTCCC +
Preference number: 5 (lower is better)
Translates to: CSSKLTGIPSLASSGRSRPAFPA*PPQAAP
Trigger: GGGAGCGGCCTGAGGAGGCAAGGCTGGGAATGCCGG...CCGGGAGCGGCCTGAGGAGGCAAGGCTGGGAATGCCGGTCAGCTTGGAGGAGCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597993.5
CDS GCA 90 bp CCGCTCCCATGCCCAGGTCTCTGCCTGGGACGCCCTCCTGCATCCTaGTTCGGCTTCACGTGGCCTCTTCCGGGAAGCGAGGGGCCGTGT +
Preference number: 5 (lower is better)
Translates to: PLPCPGLCLGRPPAS*FGFTWPLPGSEGPC
Trigger: ACACGGCCCCTCGCTTCCCGGAAGAGGCCACGTGAAGCCGAAGCAGGATGCAGGAGGGCGTCCCAGGCAGAGACCTGGGCATGGGAGCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596771.5
CDS CCA 90 bp GCCCTCGGGCAGGTCCATGGGCCACCCCTGCCGCGGCGCAGCTGCTaGCAAAGCTACCAGCCTCCCTCCTTCATGGGGAGGGATGGGAAA +
Preference number: 5 (lower is better)
Translates to: ALGQVHGPPLPRRSC*QSYQPPSFMGRDGK
Trigger: TTTCCCATCCCTCCCCATGAAGGAGGGAGGCTGGTAGCTTTGCCAGCAGCTGCGCCGCGGCAGGGGTGGCCCATGGACCTGCCCGAGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000447857.8
ENST00000593725.5
ENST00000594043.5
ENST00000594905.5
ENST00000595828.5
ENST00000596771.5
ENST00000596862.5
ENST00000597993.5
ENST00000598730.5
CDS GCA 90 bp GCTCCAGCCACTCTGAGCTGCGGACCGCTCCCATGCCCAGGTCTCTaGCTGGGACGCCCTCCTGCATCCTGCTTCGGCTTCACGTGGCCT +
Preference number: 5 (lower is better)
Translates to: APATLSCGPLPCPGL*LGRPPASCFGFTWP
Trigger: AGGCCACGTGAAGCCGAAGCAGGATGCAGGAGGGCGTCCCAGGCAGAGACCTGGGCATGGGAGCGGTCCGCAGCTCAGAGTGGCTGGAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596771.5
CDS CCA 90 bp GGTCTCTGCCTGGGACGCCCTCCTGCATCCTGCTTCGGCTTCACGTaGCCTCTTCCGGGAAGCGAGGGGCCGTGTCTGGCTCCCACACAG +
Preference number: 5 (lower is better)
Translates to: GLCLGRPPASCFGFT*PLPGSEGPCLAPTQ
Trigger: CTGTGTGGGAGCCAGACACGGCCCCTCGCTTCCCGGAAGAGGCCACGTGAAGCCGAAGCAGGATGCAGGAGGGCGTCCCAGGCAGAGACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596771.5
CDS GCA 90 bp AGAAGAGAGAGGGCACCTTCCTTCCCCTGGGCCAGACCCACCGCCTaGCGGGCTTGGGCCAGAAGGCTGCGATTCTGTTCCTCCAGGCTC +
Preference number: 5 (lower is better)
Translates to: RRERAPSFPWARPTA*RAWARRLRFCSSRL
Trigger: GAGCCTGGAGGAACAGAATCGCAGCCTTCTGGCCCAAGCCCGGCAGGCGGTGGGTCTGGCCCAGGGGAAGGAAGGTGCCCTCTCTCTTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593631.1
CDS CCA 90 bp CCCAGCGATGGGGGTAGCAGCTCGGTCCAGCCCACTCTTCTCAGCTaGGCCCCTTCAGGTAGCCTGGCCACACAGGAAGGAGGGAGGAAG +
Preference number: 5 (lower is better)
Translates to: PSDGGSSSVQPTLLS*APSGSLATQEGGRK
Trigger: CTTCCTCCCTCCTTCCTGTGTGGCCAGGCTACCTGAAGGGGCCCAGCTGAGAAGAGTGGGCTGGACCGAGCTGCTACCCCCATCGCTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000596419.1
CDS CCA 90 bp CCTCTTCCGGGAAGCGAGGGGCCGTGTCTGGCTCCCACACAGCCCTaGGCAGCTGCCATTCTTGCCACATCAGCCTGGATTTGGCCGGCT +
Preference number: 5 (lower is better)
Translates to: PLPGSEGPCLAPTQP*AAAILATSAWIWPA
Trigger: AGCCGGCCAAATCCAGGCTGATGTGGCAAGAATGGCAGCTGCCCAGGGCTGTGTGGGAGCCAGACACGGCCCCTCGCTTCCCGGAAGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596771.5
CDS-3UTR CAA 90 bp CTGACCCCAAGGCAACCGAGACTTAGCTGTGTGCCCACAGCTGCCCTCGCCAGGGCATCCAGATGGCAGTaGCCGGGAGGTCAGGGCTCC +
Preference number: 5 (lower is better)
Translates to: LTPRQPRLSCVPTAALARASRWQ*PGGQGS
Trigger: GGAGCCCTGACCTCCCGGCAACTGCCATCTGGATGC...CCTGGCGAGGGCAGCTGTGGGCACACAGCTAAGTCTCGGTTGCCTTGGGGTCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS TCA 90 bp AGCACTCCTCAGCACCCCAAATCGCACATGATGCTCCAGCCACTCTaGGCTGCGGACCGCTCCCATGCCCAGGTCTCTGCCTGGGACGCC +
Preference number: 5 (lower is better)
Translates to: STPQHPKSHMMLQPL*AADRSHAQVSAWDA
Trigger: GGCGTCCCAGGCAGAGACCTGGGCATGGGAGCGGTCCGCAGCTCAGAGTGGCTGGAGCATCATGTGCGATTTGGGGTGCTGAGGAGTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596771.5
CDS GCA 90 bp GGGAGGGCCGGCCCAACCTCTCCCGAGTGTGGGCGCATGTGCGTGTaGATTTATGCAATCCGGGGGTGTAGCCACGTCTATGAGGCCTGC +
Preference number: 5 (lower is better)
Translates to: GRAGPTSPECGRMCV*IYAIRGCSHVYEAC
Trigger: GCAGGCCTCATAGACGTGGCTACACCCCCGGATTGCATAAATGCACACGCACATGCGCCCACACTCGGGAGAGGTTGGGCCGGCCCTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000593362.1
CDS GCA 90 bp TCCTCAGCACCCCAAATCGCACATGATGCTCCAGCCACTCTGAGCTaGGGACCGCTCCCATGCCCAGGTCTCTGCCTGGGACGCCCTCCT +
Preference number: 5 (lower is better)
Translates to: SSAPQIAHDAPATLS*GPLPCPGLCLGRPP
Trigger: AGGAGGGCGTCCCAGGCAGAGACCTGGGCATGGGAGCGGTCCGCAGCTCAGAGTGGCTGGAGCATCATGTGCGATTTGGGGTGCTGAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596771.5
CDS CCA 90 bp CAGCTGCTGGCAAAGCTACCAGCCTCCCTCCTTCATGGGGAGGGATaGGAAAAGGACCAGCTGGCCCGAGCACTCCTCGTGATCCGCCCG +
Preference number: 5 (lower is better)
Translates to: QLLAKLPASLLHGEG*EKDQLARALLVIRP
Trigger: CGGGCGGATCACGAGGAGTGCTCGGGCCAGCTGGTCCTTTTCCCATCCCTCCCCATGAAGGAGGGAGGCTGGTAGCTTTGCCAGCAGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594043.5
CDS-3UTR CAA 90 bp CTGACCCCAAGGCAACCGAGACTTAGCTGTGTGCCCACAGCTGCCCTCGCCAGGCCAACCAGACGTCGGTaGCTGAGCTCCAGGTCCTCC +
Preference number: 5 (lower is better)
Translates to: LTPRQPRLSCVPTAALARPTRRR*LSSRSS
Trigger: GGAGGACCTGGAGCTCAGCAACCGACGTCTGGTTGG...CCTGGCGAGGGCAGCTGTGGGCACACAGCTAAGTCTCGGTTGCCTTGGGGTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS GCA 90 bp TGGCTGGGGAGGGCCGGCCCAACCTCTCCCGAGTGTGGGCGCATGTaGGTGTGCATTTATGCAATCCGGGGGTGTAGCCACGTCTATGAG +
Preference number: 5 (lower is better)
Translates to: WLGRAGPTSPECGRM*VCIYAIRGCSHVYE
Trigger: CTCATAGACGTGGCTACACCCCCGGATTGCATAAATGCACACGCACATGCGCCCACACTCGGGAGAGGTTGGGCCGGCCCTCCCCAGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593362.1
CDS CCA 90 bp CAGCTGCTGGCAAAGCTACCAGCCTCCCTCCTTCATGGGGAGGGATaGGAAAAGGACCAGCTGGCCCGAGCACTCCTGGAGCCACGTCCT +
Preference number: 5 (lower is better)
Translates to: QLLAKLPASLLHGEG*EKDQLARALLEPRP
Trigger: AGGACGTGGCTCCAGGAGTGCTCGGGCCAGCTGGTCCTTTTCCCATCCCTCCCCATGAAGGAGGGAGGCTGGTAGCTTTGCCAGCAGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000447857.8
ENST00000593725.5
ENST00000594905.5
ENST00000596862.5
ENST00000597993.5
ENST00000598730.5
CDS CCA 90 bp CTTGTAGCTCGGGTCTGGGGTCTTCGCCTCCGAAGCTCTCCAGGTTaGCTGGCTCCTCAGCTTCTGGGCATCCAGATGGCAGTTGCCGGG +
Preference number: 5 (lower is better)
Translates to: LVARVWGLRLRSSPG*LAPQLLGIQMAVAG
Trigger: CCCGGCAACTGCCATCTGGATGCCCAGAAGCTGAGGAGCCAGCCAACCTGGAGAGCTTCGGAGGCGAAGACCCCAGACCCGAGCTACAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447857.8
ENST00000594043.5
ENST00000595828.5
ENST00000596130.5
ENST00000596771.5
ENST00000600570.1
CDS CCA 90 bp GCCGGGCTTGGGCCAGAAGGCTGCGATTCTGTTCCTCCAGGCTCCTaGCCAGAGTCTTCAGGTCCTCCAGCTCCTCATCCATGGCCTTGG +
Preference number: 5 (lower is better)
Translates to: AGLGPEGCDSVPPGS*PESSGPPAPHPWPW
Trigger: CCAAGGCCATGGATGAGGAGCTGGAGGACCTGAAGACTCTGGCCAGGAGCCTGGAGGAACAGAATCGCAGCCTTCTGGCCCAAGCCCGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000447857.8
ENST00000593631.1
ENST00000596130.5
ENST00000596771.5
ENST00000600570.1
CDS CCA 90 bp CCTCCATTCCACCCAGGCCGACCCAAAACCTTAGTGGCCGCACTCTaGGGGCTAGAGAGAGACCTGGGCGCTGCTATCATCACAGCGGGC +
Preference number: 5 (lower is better)
Translates to: PPFHPGRPKTLVAAL*GLERDLGAAIITAG
Trigger: GCCCGCTGTGATGATAGCAGCGCCCAGGTCTCTCTCTAGCCCCCAGAGTGCGGCCACTAAGGTTTTGGGTCGGCCTGGGTGGAATGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596771.5
CDS-3UTR CAA 90 bp CTGACCCCAAGGCAACCGAGACTTAGCTGTGTGCCCACAGCTGCCCTCGCCAGGCCGAAGCTCTCCAGGTaGGCTGGCTCCTCAGCTTCT +
Preference number: 5 (lower is better)
Translates to: LTPRQPRLSCVPTAALARPKLSR*AGSSAS
Trigger: AGAAGCTGAGGAGCCAGCCAACCTGGAGAGCTTCGG...CCTGGCGAGGGCAGCTGTGGGCACACAGCTAAGTCTCGGTTGCCTTGGGGTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR CAA 90 bp CTGACCCCAAGGCAACCGAGACTTAGCTGTGTGCCCACAGCTGCCCTCGCCAGGTCCTCATCCATGGCCTaGGCAAACTGCAGGGCCTGC +
Preference number: 5 (lower is better)
Translates to: LTPRQPRLSCVPTAALARSSSMA*ANCRAC
Trigger: GCAGGCCCTGCAGTTTGCCAAGGCCATGGATGAGGA...CCTGGCGAGGGCAGCTGTGGGCACACAGCTAAGTCTCGGTTGCCTTGGGGTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS TCA 90 bp TCTCCCAGGGCTGGAAGTGAACTTCTAGGCTCCCTGCCCTGGCCTTaGACAGCTGGGTGCAGCAGCTCACTGAGCACAGGCTGCAGGACG +
Preference number: 5 (lower is better)
Translates to: SPRAGSELLGSLPWP*TAGCSSSLSTGCRT
Trigger: CGTCCTGCAGCCTGTGCTCAGTGAGCTGCTGCACCCAGCTGTTCAAGGCCAGGGCAGGGAGCCTAGAAGTTCACTTCCAGCCCTGGGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593725.5
CDS GCA 90 bp GGAGTTGAGTATTTGCTCCTCCAAGCTGACCGGCATTCCCAGCCTTaGCTCCTCAGGCCGCTCCCGGAGGTACATTTCCGCAGTGGGGCC +
Preference number: 5 (lower is better)
Translates to: GVEYLLLQADRHSQP*LLRPLPEVHFRSGA
Trigger: GGCCCCACTGCGGAAATGTACCTCCGGGAGCGGCCTGAGGAGGCAAGGCTGGGAATGCCGGTCAGCTTGGAGGAGCAAATACTCAACTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000447857.8
ENST00000594043.5
ENST00000596771.5
ENST00000596862.5
CDS-3UTR CAA 90 bp AGGAGAATCACTGAGGCCCTGACCCCAAGGCAACCGAGACTTAGCTGTGTGCCCTTCCGCCTGCCGGGCTaGGGCCAGAAGGCTGCGATT +
Preference number: 5 (lower is better)
Translates to: RRITEALTPRQPRLSCVPFRLPG*GQKAAI
Trigger: AATCGCAGCCTTCTGGCCCAAGCCCGGCAGGCGGAA...GGGCACACAGCTAAGTCTCGGTTGCCTTGGGGTCAGGGCCTCAGTGATTCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS GCA 90 bp GGAGTTGAGTATTTGCTCCTCCAAGCTGACCGGCATTCCCAGCCTTaGCTCCTCAGGCCGCTCCCGGAGGTACACTGGAGCCACGTCCTA +
Preference number: 5 (lower is better)
Translates to: GVEYLLLQADRHSQP*LLRPLPEVHWSHVL
Trigger: TAGGACGTGGCTCCAGTGTACCTCCGGGAGCGGCCTGAGGAGGCAAGGCTGGGAATGCCGGTCAGCTTGGAGGAGCAAATACTCAACTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600895.1
CDS-3UTR CAA 90 bp AATGGGGATCCCAGTGGAGAGAGGGCCAGGGGATTTATTGAGCTAGACACTGCTCCGGCATTCCCAGCCTaGCCTCCTCAGGCCGCTCCC +
Preference number: 5 (lower is better)
Translates to: NGDPSGERARGFIELDTAPAFPA*PPQAAP
Trigger: GGGAGCGGCCTGAGGAGGCAAGGCTGGGAATGCCGG...AGCAGTGTCTAGCTCAATAAATCCCCTGGCCCTCTCTCCACTGGGATCCCCATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447857.8
CDS-3UTR CAA 90 bp CCAAGGCAACCGAGACTTAGCTGTGTGCCCACAGCTGCCCTCGCCAGGCTTGTTGCTGTTGGCCAATGTTaGGAGGCGTGCATCCTGGGG +
Preference number: 5 (lower is better)
Translates to: PRQPRLSCVPTAALARLVAVGQC*EACILG
Trigger: CCCCAGGATGCACGCCTCCAAACATTGGCCAACAGC...AACAAGCCTGGCGAGGGCAGCTGTGGGCACACAGCTAAGTCTCGGTTGCCTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR CAA 90 bp ACAGGGATGTGGATCCCCTGTACTCTATCTAGGGTAAGCCTGCGCAACAGTGGACACAGGCACCAGGGCTaGCTGGAGTTCCCGCCGCGC +
Preference number: 5 (lower is better)
Translates to: TGMWIPCTLSRVSLRNSGHRHQG*LEFPPR
Trigger: GCGCGGCGGGAACTCCAGCAAGCCCTGGTGCCTGTG...TCCACTGTTGCGCAGGCTTACCCTAGATAGAGTACAGGGGATCCACATCCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS GCA 90 bp GGAGTTGAGTATTTGCTCCTCCAAGCTGACCGGCATTCCCAGCCTTaGCTCCTCAGGCCGCTCCCGGAGGTACATTCTCTTGGGCCTCAG +
Preference number: 5 (lower is better)
Translates to: GVEYLLLQADRHSQP*LLRPLPEVHSLGPQ
Trigger: CTGAGGCCCAAGAGAATGTACCTCCGGGAGCGGCCTGAGGAGGCAAGGCTGGGAATGCCGGTCAGCTTGGAGGAGCAAATACTCAACTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595828.5
CDS GCA 90 bp GGAGTTGAGTATTTGCTCCTCCAAGCTGACCGGCATTCCCAGCCTTaGCTCCTCAGGCCGCTCCCGGAGGTACAATCCGTCCGTTCACTC +
Preference number: 5 (lower is better)
Translates to: GVEYLLLQADRHSQP*LLRPLPEVQSVRSL
Trigger: GAGTGAACGGACGGATTGTACCTCCGGGAGCGGCCTGAGGAGGCAAGGCTGGGAATGCCGGTCAGCTTGGAGGAGCAAATACTCAACTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594905.5
CDS CCA 90 bp TCCAGCCTCAGTTCCTGCGTCGTCACTCTGTATTCTTCCAGGGTCTaGGCCAGGCTCTCCACATCGCGAGTGCGCTCAGAGAGGATGGTG +
Preference number: 5 (lower is better)
Translates to: SSLSSCVVTLYSSRV*ARLSTSRVRSERMV
Trigger: CACCATCCTCTCTGAGCGCACTCGCGATGTGGAGAGCCTGGCCCAGACCCTGGAAGAATACAGAGTGACGACGCAGGAACTGAGGCTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000447857.8
ENST00000596130.5
ENST00000600570.1
CDS CCA 90 bp GCTTCTGGGCATCCAGATGGCAGTTGCCGGGAGGTCAGGGCTCCCTaGAAGGCGGTCTCCTCTTCCAGCTCTAATCCCCTGTATCAAAGG +
Preference number: 5 (lower is better)
Translates to: ASGHPDGSCREVRAP*KAVSSSSSNPLYQR
Trigger: CCTTTGATACAGGGGATTAGAGCTGGAAGAGGAGACCGCCTTCCAGGGAGCCCTGACCTCCCGGCAACTGCCATCTGGATGCCCAGAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596130.5
CDS-3UTR CAA 90 bp AGGAGAATCACTGAGGCCCTGACCCCAAGGCAACCGAGACTTAGCTGTGTGCCCTCCTCATCCATGGCCTaGGCAAACTGCAGGGCCTGC +
Preference number: 5 (lower is better)
Translates to: RRITEALTPRQPRLSCVPSSSMA*ANCRAC
Trigger: GCAGGCCCTGCAGTTTGCCAAGGCCATGGATGAGGA...GGGCACACAGCTAAGTCTCGGTTGCCTTGGGGTCAGGGCCTCAGTGATTCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS CCA 90 bp ACACAGCCCTGGGCAGCTGCCATTCTTGCCACATCAGCCTGGATTTaGCCGGCTGGCTTCTCATGGGAGTTTGATCCTGACTTGCCCCTG +
Preference number: 5 (lower is better)
Translates to: TQPWAAAILATSAWI*PAGFSWEFDPDLPL
Trigger: CAGGGGCAAGTCAGGATCAAACTCCCATGAGAAGCCAGCCGGCCAAATCCAGGCTGATGTGGCAAGAATGGCAGCTGCCCAGGGCTGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596771.5
CDS CCA 90 bp GCTCCCACACAGCCCTGGGCAGCTGCCATTCTTGCCACATCAGCCTaGATTTGGCCGGCTGGCTTCTCATGGGAGTTTGATCCTGACTTG +
Preference number: 5 (lower is better)
Translates to: APTQPWAAAILATSA*IWPAGFSWEFDPDL
Trigger: CAAGTCAGGATCAAACTCCCATGAGAAGCCAGCCGGCCAAATCCAGGCTGATGTGGCAAGAATGGCAGCTGCCCAGGGCTGTGTGGGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596771.5
CDS-3UTR CAA 90 bp TGCCTCCTCAGGCCGCTCCCGGAGGTACACTGGGGCAATGGACTCAACTTCTCTCGTGGAGTTGAGTATTaGCTCCTCCAAGCTGACCGG +
Preference number: 5 (lower is better)
Translates to: CLLRPLPEVHWGNGLNFSRGVEY*LLQADR
Trigger: CCGGTCAGCTTGGAGGAGCAAATACTCAACTCCACG...AGAGAAGTTGAGTCCATTGCCCCAGTGTACCTCCGGGAGCGGCCTGAGGAGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597993.5
CDS-3UTR CAA 90 bp AGGAGAATCACTGAGGCCCTGACCCCAAGGCAACCGAGACTTAGCTGTGTGCCCTTGGGGTCCAGGCTGTaGGCCAATGTTTGGAGGCGT +
Preference number: 5 (lower is better)
Translates to: RRITEALTPRQPRLSCVPLGSRL*ANVWRR
Trigger: ACGCCTCCAAACATTGGCCAACAGCCTGGACCCCAA...GGGCACACAGCTAAGTCTCGGTTGCCTTGGGGTCAGGGCCTCAGTGATTCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR CAA 90 bp ACAGGGATGTGGATCCCCTGTACTCTATCTAGGGTAAGCCTGCGCAACAGTGGAGCATCCAGATGGCAGTaGCCGGGAGGTCAGGGCTCC +
Preference number: 5 (lower is better)
Translates to: TGMWIPCTLSRVSLRNSGASRWQ*PGGQGS
Trigger: GGAGCCCTGACCTCCCGGCAACTGCCATCTGGATGC...TCCACTGTTGCGCAGGCTTACCCTAGATAGAGTACAGGGGATCCACATCCCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS TCA 90 bp GGTGACCTCTGCCCCTTCCTACTCCATAGTCACACTCTGCCGCCCTaGCTCCAGGAAACAAAGAAGAGAGAGGGCACCTTCCTTCCCCTG +
Preference number: 5 (lower is better)
Translates to: GDLCPFLLHSHTLPP*LQETKKREGTFLPL
Trigger: CAGGGGAAGGAAGGTGCCCTCTCTCTTCTTTGTTTCCTGGAGTCAGGGCGGCAGAGTGTGACTATGGAGTAGGAAGGGGCAGAGGTCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593631.1
CDS CCA 90 bp GCCATTCTTGCCACATCAGCCTGGATTTGGCCGGCTGGCTTCTCATaGGAGTTTGATCCTGACTTGCCCCTGCTCCTGATCCTCCCATGG +
Preference number: 5 (lower is better)
Translates to: AILATSAWIWPAGFS*EFDPDLPLLLILPW
Trigger: CCATGGGAGGATCAGGAGCAGGGGCAAGTCAGGATCAAACTCCCATGAGAAGCCAGCCGGCCAAATCCAGGCTGATGTGGCAAGAATGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596771.5
CDS-3UTR CAA 90 bp CCAAGGCAACCGAGACTTAGCTGTGTGCCCACAGCTGCCCTCGCCAGGCTTGTTCTGCCCTCGCCAGGCTaGTTTTGTGAGGGAATAATC +
Preference number: 5 (lower is better)
Translates to: PRQPRLSCVPTAALARLVLPSPG*FCEGII
Trigger: GATTATTCCCTCACAAAACAAGCCTGGCGAGGGCAG...AACAAGCCTGGCGAGGGCAGCTGTGGGCACACAGCTAAGTCTCGGTTGCCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS GCA 90 bp CTGAGGGCTCCTCACCTCTCCTTACCAAGTTTCTTTCCCCGTCCTTaGCTGAGAATGGAAATCTTAACCCCCACCGGGCACTGGGCTCTG +
Preference number: 5 (lower is better)
Translates to: LRAPHLSLPSFFPRP*LRMEILTPTGHWAL
Trigger: CAGAGCCCAGTGCCCGGTGGGGGTTAAGATTTCCATTCTCAGGCAAGGACGGGGAAAGAAACTTGGTAAGGAGAGGTGAGGAGCCCTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593362.1
CDS-3UTR CAA 90 bp CCTCCTCAGGCCGCTCCCGGAGGTACACTGGGGCAATGGACTCAACTTCTCTTGTGGACTCAACTTCTCTaGGGCCTCAGTTTCTTCCTC +
Preference number: 5 (lower is better)
Translates to: PPQAAPGGTLGQWTQLLLWTQLL*GLSFFL
Trigger: GAGGAAGAAACTGAGGCCCAAGAGAAGTTGAGTCCA...CAAGAGAAGTTGAGTCCATTGCCCCAGTGTACCTCCGGGAGCGGCCTGAGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597993.5
CDS TCA 90 bp TCAAAGAGCTGCCGCTTCAAAGTGTCCTTCTCCATGGCCAGCTCCTaGCTTCTCTTTTTCACTCCATCCCGCTCGGCAAGCAGCTTCCCG +
Preference number: 5 (lower is better)
Translates to: SKSCRFKVSFSMASS*LLFFTPSRSASSFP
Trigger: CGGGAAGCTGCTTGCCGAGCGGGATGGAGTGAAAAAGAGAAGTCAGGAGCTGGCCATGGAGAAGGACACTTTGAAGCGGCAGCTCTTTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000447857.8
ENST00000596130.5
ENST00000600570.1
CDS TCA 90 bp CTCTTTCATCCGTCCGTTCACTCAACAGTAAGTGAGCTCCCACAGTaGGTCAGGAGTTGCTCTGGGGTCCCAGCCAACAGGGCAGTCTCT +
Preference number: 5 (lower is better)
Translates to: LFHPSVHSTVSELPQ*VRSCSGVPANRAVS
Trigger: AGAGACTGCCCTGTTGGCTGGGACCCCAGAGCAACTCCTGACTCACTGTGGGAGCTCACTTACTGTTGAGTGAACGGACGGATGAAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597993.5
CDS TCA 90 bp AGGTACAATCCGTCCGTTCACTCAACAGTAAGTGAGCTCCCACAGTaGGTCAGGAGTTGCTCTGGGGTCCCAGCCAACAGGGCAGTCTCT +
Preference number: 5 (lower is better)
Translates to: RYNPSVHSTVSELPQ*VRSCSGVPANRAVS
Trigger: AGAGACTGCCCTGTTGGCTGGGACCCCAGAGCAACTCCTGACTCACTGTGGGAGCTCACTTACTGTTGAGTGAACGGACGGATTGTACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594905.5
CDS TCA 90 bp CTGGGGCTTCAGATGGAAACTCAGTTTCCTCACTGGTCTCATGGATaGCTTCCTCCCACTGCCACACCCCACACAGAGGGTTGGAGAGAT +
Preference number: 5 (lower is better)
Translates to: LGLQMETQFPHWSHG*LPPTATPHTEGWRD
Trigger: ATCTCTCCAACCCTCTGTGTGGGGTGTGGCAGTGGGAGGAAGTCATCCATGAGACCAGTGAGGAAACTGAGTTTCCATCTGAAGCCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000447857.8
ENST00000593362.1
ENST00000600570.1
CDS-3UTR CAA 90 bp GAAATTTCCGTTTCCCGCAGATGTGATGTAGGAAGCTACAACTGCCAACTCCTGAACGACGAACGGCAGTaGAGTTGGGGGAGGTGCGCG +
Preference number: 5 (lower is better)
Translates to: EISVSRRCDVGSYNCQLLNDERQ*SWGRCA
Trigger: CGCGCACCTCCCCCAACTCAACTGCCGTTCGTCGTT...CAGGAGTTGGCAGTTGTAGCTTCCTACATCACATCTGCGGGAAACGGAAATTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447857.8
CDS-3UTR CAA 90 bp TGGATCCCCTGTACTCTATCTAGGGTAAGCCTGCGCAACAGTGGACTAACAATGGCTGTTGGCCAATGTTaGGAGGCGTGCATCCTGGGG +
Preference number: 5 (lower is better)
Translates to: WIPCTLSRVSLRNSGLTMAVGQC*EACILG
Trigger: CCCCAGGATGCACGCCTCCAAACATTGGCCAACAGC...CATTGTTAGTCCACTGTTGCGCAGGCTTACCCTAGATAGAGTACAGGGGATCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR CAA 90 bp AGGAGAATCACTGAGGCCCTGACCCCAAGGCAACCGAGACTTAGCTGTGTGCCCGAGGATGGTGTCTCTTaGGCAAATGAGGTGTTCACA +
Preference number: 5 (lower is better)
Translates to: RRITEALTPRQPRLSCVPEDGVS*ANEVFT
Trigger: TGTGAACACCTCATTTGCCAAAGAGACACCATCCTC...GGGCACACAGCTAAGTCTCGGTTGCCTTGGGGTCAGGGCCTCAGTGATTCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR CAA 90 bp CCGCTCCCGGAGGTACACTGGGGCAATGGACTCAACTTCTCTTGGGCCTCAGTTCTCTGGAAAATGGGGTaGGTGTTACCTCTTTCATCC +
Preference number: 5 (lower is better)
Translates to: PLPEVHWGNGLNFSWASVLWKMG*VLPLSS
Trigger: GGATGAAAGAGGTAACACCAACCCCATTTTCCAGAG...AACTGAGGCCCAAGAGAAGTTGAGTCCATTGCCCCAGTGTACCTCCGGGAGCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000597993.5
CDS TCA 90 bp CTGTTCTCACAGTGTGATATAACCTCAGGGACATTCCCACACTACTaGCATTCTGAGGTCTCCCCAAGACAGGCTGCTGGGGTGTTGGGG +
Preference number: 5 (lower is better)
Translates to: LFSQCDITSGTFPHY*HSEVSPRQAAGVLG
Trigger: CCCCAACACCCCAGCAGCCTGTCTTGGGGAGACCTCAGAATGTCAGTAGTGTGGGAATGTCCCTGAGGTTATATCACACTGTGAGAACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596771.5
CDS-3UTR CAA 90 bp ACAGGGATGTGGATCCCCTGTACTCTATCTAGGGTAAGCCTGCGCAACAGTGGAATGCTCCGCTGCAATTaGGCATTCTCCCCAACCAGA +
Preference number: 5 (lower is better)
Translates to: TGMWIPCTLSRVSLRNSGMLRCN*AFSPTR
Trigger: TCTGGTTGGGGAGAATGCCAAATTGCAGCGGAGCAT...TCCACTGTTGCGCAGGCTTACCCTAGATAGAGTACAGGGGATCCACATCCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR CAA 90 bp TCTAGGGTAAGCCTGCGCAACAGTGGACTAACAATGGGGATCCCAGTGGAGAGACTGCCCTCGCCAGGCTaGTTTTGTGAGGGAATAATC +
Preference number: 5 (lower is better)
Translates to: SRVSLRNSGLTMGIPVERLPSPG*FCEGII
Trigger: GATTATTCCCTCACAAAACAAGCCTGGCGAGGGCAG...TCTCTCCACTGGGATCCCCATTGTTAGTCCACTGTTGCGCAGGCTTACCCTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR CAA 90 bp AATGGGGATCCCAGTGGAGAGAGGGCCAGGGGATTTATTGAGCTAGACACTGCTTGGAGAGATCAGCAGTaGCCACTTCCTGTCGAATGG +
Preference number: 5 (lower is better)
Translates to: NGDPSGERARGFIELDTAWRDQQ*PLPVEW
Trigger: CCATTCGACAGGAAGTGGCAACTGCTGATCTCTCCA...AGCAGTGTCTAGCTCAATAAATCCCCTGGCCCTCTCTCCACTGGGATCCCCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600570.1
CDS TCA 90 bp CCACATCGCGAGTGCGCTCAGAGAGGATGGTGTCTCTTTGGCAAATaGGGTGTTCACACTCAAAGAGCTGCCGCTTCAAAGTGTCCTTCT +
Preference number: 5 (lower is better)
Translates to: PHRECAQRGWCLFGK*GVHTQRAAASKCPS
Trigger: AGAAGGACACTTTGAAGCGGCAGCTCTTTGAGTGTGAACACCTCATTTGCCAAAGAGACACCATCCTCTCTGAGCGCACTCGCGATGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000447857.8
ENST00000596130.5
ENST00000600570.1
CDS-3UTR CAA 90 bp AGGAAGGAAGAAATTTCCGTTTCCCGCAGATGTGATGTAGGAAGCTACAACTGCCCGAAGCTCTCCAGGTaGGCTGGCTCCTCAGCTTCT +
Preference number: 5 (lower is better)
Translates to: RKEEISVSRRCDVGSYNCPKLSR*AGSSAS
Trigger: AGAAGCTGAGGAGCCAGCCAACCTGGAGAGCTTCGG...GCAGTTGTAGCTTCCTACATCACATCTGCGGGAAACGGAAATTTCTTCCTTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR CAA 90 bp AGGTACACTGGGGCAATGGACTCAACTTCTCTTGGGCCTCAGTTTCTTCCTCTGGCTTCGAACGTGGAGTaGAGTATTTGCTCCTCCAAG +
Preference number: 5 (lower is better)
Translates to: RYTGAMDSTSLGPQFLPLASNVE*SICSSK
Trigger: CTTGGAGGAGCAAATACTCAACTCCACGTTCGAAGC...CAGAGGAAGAAACTGAGGCCCAAGAGAAGTTGAGTCCATTGCCCCAGTGTACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597993.5
CDS-3UTR CAA 90 bp ACAGGGATGTGGATCCCCTGTACTCTATCTAGGGTAAGCCTGCGCAACAGTGGAGAGGATGGTGTCTCTTaGGCAAATGAGGTGTTCACA +
Preference number: 5 (lower is better)
Translates to: TGMWIPCTLSRVSLRNSGEDGVS*ANEVFT
Trigger: TGTGAACACCTCATTTGCCAAAGAGACACCATCCTC...TCCACTGTTGCGCAGGCTTACCCTAGATAGAGTACAGGGGATCCACATCCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR CAA 90 bp AGGAAGGAAGAAATTTCCGTTTCCCGCAGATGTGATGTAGGAAGCTACAACTGCACCCCACACAGAGGGTaGGAGAGATCAGCAGTTGCC +
Preference number: 5 (lower is better)
Translates to: RKEEISVSRRCDVGSYNCTPHRG*ERSAVA
Trigger: GGCAACTGCTGATCTCTCCAACCCTCTGTGTGGGGT...GCAGTTGTAGCTTCCTACATCACATCTGCGGGAAACGGAAATTTCTTCCTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR CAA 90 bp AGGCAACTGCTTCTCTTTTATTATGAATATGATTTGAATCTACCCACTGCACACCACAGGCACCAGGGCTaGCTGGAGTTCCCGCCGCGC +
Preference number: 5 (lower is better)
Translates to: RQLLLFYYEYDLNLPTAHHRHQG*LEFPPR
Trigger: GCGCGGCGGGAACTCCAGCAAGCCCTGGTGCCTGTG...GTGTGCAGTGGGTAGATTCAAATCATATTCATAATAAAAGAGAAGCAGTTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR CAA 90 bp AGGAAGGAAGAAATTTCCGTTTCCCGCAGATGTGATGTAGGAAGCTACAACTGCCGTGGAGTTGAGTATTaGCTCCTCCAAGCTGACCGG +
Preference number: 5 (lower is better)
Translates to: RKEEISVSRRCDVGSYNCRGVEY*LLQADR
Trigger: CCGGTCAGCTTGGAGGAGCAAATACTCAACTCCACG...GCAGTTGTAGCTTCCTACATCACATCTGCGGGAAACGGAAATTTCTTCCTTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447857.8
CDS-3UTR CAA 90 bp ATAAAAAGGAAGGAAGAAATTTCCGTTTCCCGCAGATGTGATGTAGGAAGCTACCCAACCAGACGTCGGTaGCTGAGCTCCAGGTCCTCC +
Preference number: 5 (lower is better)
Translates to: IKRKEEISVSRRCDVGSYPTRRR*LSSRSS
Trigger: GGAGGACCTGGAGCTCAGCAACCGACGTCTGGTTGG...GTAGCTTCCTACATCACATCTGCGGGAAACGGAAATTTCTTCCTTCCTTTTTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR CAA 90 bp TTTGAATCTACCCACTGCACACTGAGGCTACTGCCTCTCTTTATAAAAAGGAAGTTGGGGTCCAGGCTGTaGGCCAATGTTTGGAGGCGT +
Preference number: 5 (lower is better)
Translates to: FESTHCTLRLLPLFIKRKLGSRL*ANVWRR
Trigger: ACGCCTCCAAACATTGGCCAACAGCCTGGACCCCAA...CTTCCTTTTTATAAAGAGAGGCAGTAGCCTCAGTGTGCAGTGGGTAGATTCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR CAA 90 bp TTTGAATCTACCCACTGCACACTGAGGCTACTGCCTCTCTTTATAAAAAGGAAGATGCTCCGCTGCAATTaGGCATTCTCCCCAACCAGA +
Preference number: 5 (lower is better)
Translates to: FESTHCTLRLLPLFIKRKMLRCN*AFSPTR
Trigger: TCTGGTTGGGGAGAATGCCAAATTGCAGCGGAGCAT...CTTCCTTTTTATAAAGAGAGGCAGTAGCCTCAGTGTGCAGTGGGTAGATTCAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR CAA 90 bp TCTAGGGTAAGCCTGCGCAACAGTGGACTAACAATGGGGATCCCAGTGGAGAGAATTACTGGGGGAGTTTaGCTATTGTTAAGAAATGTC +
Preference number: 5 (lower is better)
Translates to: SRVSLRNSGLTMGIPVERITGGV*LLLRNV
Trigger: GACATTTCTTAACAATAGCAAAACTCCCCCAGTAAT...TCTCTCCACTGGGATCCCCATTGTTAGTCCACTGTTGCGCAGGCTTACCCTAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR CAA 90 bp AATGGGGATCCCAGTGGAGAGAGGGCCAGGGGATTTATTGAGCTAGACACTGCTATTACTGGGGGAGTTTaGCTATTGTTAAGAAATGTC +
Preference number: 5 (lower is better)
Translates to: NGDPSGERARGFIELDTAITGGV*LLLRNV
Trigger: GACATTTCTTAACAATAGCAAAACTCCCCCAGTAAT...AGCAGTGTCTAGCTCAATAAATCCCCTGGCCCTCTCTCCACTGGGATCCCCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000447857.8
ENST00000600570.1
CDS-3UTR CAA 90 bp AGGCAACTGCTTCTCTTTTATTATGAATATGATTTGAATCTACCCACTGCACACGCTTCGAACGTGGAGTaGAGTATTTGCTCCTCCAAG +
Preference number: 5 (lower is better)
Translates to: RQLLLFYYEYDLNLPTAHASNVE*SICSSK
Trigger: CTTGGAGGAGCAAATACTCAACTCCACGTTCGAAGC...GTGTGCAGTGGGTAGATTCAAATCATATTCATAATAAAAGAGAAGCAGTTGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447857.8
CDS CAA 72 bp GGGCGCTGCTATCATCACAGCGGGCACGGGCGCCCCTaGGGGCCACCAGTCGAGCCTGGGCTCGCCTGTCCT +
Preference number: 6 (lower is better)
Translates to: GRCYHHSGHGRP*GPPVEPGLACP
Trigger: AGGACAGGCGAGCCCAGGCTCGACTGGTGGCCCCAAGGGGCGCCCGTGCCCGCTGTGATGATAGCAGCGCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596771.5
CDS GCA 72 bp GGGCAGGTCCATGGGCCACCCCTGCCGCGGCGCAGCTaGTGGCAAAGCTACCAGCCTCCCTCCTTCATGGGG +
Preference number: 6 (lower is better)
Translates to: GQVHGPPLPRRS*WQSYQPPSFMG
Trigger: CCCCATGAAGGAGGGAGGCTGGTAGCTTTGCCAGCAGCTGCGCCGCGGCAGGGGTGGCCCATGGACCTGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000447857.8
ENST00000593725.5
ENST00000594043.5
ENST00000594905.5
ENST00000595828.5
ENST00000596771.5
ENST00000596862.5
ENST00000597993.5
ENST00000598730.5
CDS GCA 72 bp GGCCGCACTCTGGGGGCTAGAGAGAGACCTGGGCGCTaGTATCATCACAGCGGGCACGGGCGCCCCTTGGGG +
Preference number: 6 (lower is better)
Translates to: GRTLGARERPGR*YHHSGHGRPLG
Trigger: CCCCAAGGGGCGCCCGTGCCCGCTGTGATGATAGCAGCGCCCAGGTCTCTCTCTAGCCCCCAGAGTGCGGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000596771.5
CDS CAA 90 bp GAGAGACCTGGGCGCTGCTATCATCACAGCGGGCACGGGCGCCCCTaGGGGCCACCAGTCGAGCCTGGGCTCGCCTGTCCTCACCCAGCT +
Preference number: 6 (lower is better)
Translates to: ERPGRCYHHSGHGRP*GPPVEPGLACPHPA
Trigger: AGCTGGGTGAGGACAGGCGAGCCCAGGCTCGACTGGTGGCCCCAAGGGGCGCCCGTGCCCGCTGTGATGATAGCAGCGCCCAGGTCTCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596771.5
CDS CAA 90 bp GAGGGCACCTTCCTTCCCCTGGGCCAGACCCACCGCCTGCCGGGCTaGGGCCAGAAGGCTGCGATTCTGTTCCTCCAGGCTCCTGGCCAG +
Preference number: 6 (lower is better)
Translates to: EGTFLPLGQTHRLPG*GQKAAILFLQAPGQ
Trigger: CTGGCCAGGAGCCTGGAGGAACAGAATCGCAGCCTTCTGGCCCAAGCCCGGCAGGCGGTGGGTCTGGCCCAGGGGAAGGAAGGTGCCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593631.1
CDS CCA 72 bp CAGGTCCATGGGCCACCCCTGCCGCGGCGCAGCTGCTaGCAAAGCTACCAGCCTCCCTCCTTCATGGGGAGG +
Preference number: 6 (lower is better)
Translates to: QVHGPPLPRRSC*QSYQPPSFMGR
Trigger: CCTCCCCATGAAGGAGGGAGGCTGGTAGCTTTGCCAGCAGCTGCGCCGCGGCAGGGGTGGCCCATGGACCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000447857.8
ENST00000593725.5
ENST00000594043.5
ENST00000594905.5
ENST00000595828.5
ENST00000596771.5
ENST00000596862.5
ENST00000597993.5
ENST00000598730.5
CDS CCA 72 bp CTGGGACGCCCTCCTGCATCCTGCTTCGGCTTCACGTaGCCTCTTCCGGGAAGCGAGGGGCCGTGTCTGGCT +
Preference number: 6 (lower is better)
Translates to: LGRPPASCFGFT*PLPGSEGPCLA
Trigger: AGCCAGACACGGCCCCTCGCTTCCCGGAAGAGGCCACGTGAAGCCGAAGCAGGATGCAGGAGGGCGTCCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596771.5
CDS GCA 72 bp TGCCCAGGTCTCTGCCTGGGACGCCCTCCTGCATCCTaGTTCGGCTTCACGTGGCCTCTTCCGGGAAGCGAG +
Preference number: 6 (lower is better)
Translates to: CPGLCLGRPPAS*FGFTWPLPGSE
Trigger: CTCGCTTCCCGGAAGAGGCCACGTGAAGCCGAAGCAGGATGCAGGAGGGCGTCCCAGGCAGAGACCTGGGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596771.5
CDS GCA 72 bp ACTCTGAGCTGCGGACCGCTCCCATGCCCAGGTCTCTaGCTGGGACGCCCTCCTGCATCCTGCTTCGGCTTC +
Preference number: 6 (lower is better)
Translates to: TLSCGPLPCPGL*LGRPPASCFGF
Trigger: GAAGCCGAAGCAGGATGCAGGAGGGCGTCCCAGGCAGAGACCTGGGCATGGGAGCGGTCCGCAGCTCAGAGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596771.5
CDS CCA 72 bp CTGGCTGGGGAGGGCCGGCCCAACCTCTCCCGAGTGTaGGCGCATGTGCGTGTGCATTTATGCAATCCGGGG +
Preference number: 6 (lower is better)
Translates to: LAGEGRPNLSRV*AHVRVHLCNPG
Trigger: CCCCGGATTGCATAAATGCACACGCACATGCGCCCACACTCGGGAGAGGTTGGGCCGGCCCTCCCCAGCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593362.1
CDS TCA 72 bp TGCCCTGGCCTTGAACAGCTGGGTGCAGCAGCTCACTaGGCACAGGCTGCAGGACGGGGTAGATCCAGGGGG +
Preference number: 6 (lower is better)
Translates to: CPGLEQLGAAAH*AQAAGRGRSRG
Trigger: CCCCCTGGATCTACCCCGTCCTGCAGCCTGTGCTCAGTGAGCTGCTGCACCCAGCTGTTCAAGGCCAGGGCA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593725.5
CDS TCA 72 bp CTGGCCCGAGCACTCCTCAGCACCCCAAATCGCACATaGTGCTCCAGCCACTCTGAGCTGCGGACCGCTCCC +
Preference number: 6 (lower is better)
Translates to: LARALLSTPNRT*CSSHSELRTAP
Trigger: GGGAGCGGTCCGCAGCTCAGAGTGGCTGGAGCATCATGTGCGATTTGGGGTGCTGAGGAGTGCTCGGGCCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596771.5
CDS TCA 72 bp GATGGGAAAAGGACCAGCTGGCCCGAGCACTCCTCGTaGTCCGCCCGCCTCGGCCTCCCAAGTGGTCAGGAT +
Preference number: 6 (lower is better)
Translates to: DGKRTSWPEHSS*SARLGLPSGQD
Trigger: ATCCTGACCACTTGGGAGGCCGAGGCGGGCGGATCACGAGGAGTGCTCGGGCCAGCTGGTCCTTTTCCCATC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594043.5
CDS GCA 72 bp AGGGCCGGCCCAACCTCTCCCGAGTGTGGGCGCATGTaGGTGTGCATTTATGCAATCCGGGGGTGTAGCCAC +
Preference number: 6 (lower is better)
Translates to: RAGPTSPECGRM*VCIYAIRGCSH
Trigger: GTGGCTACACCCCCGGATTGCATAAATGCACACGCACATGCGCCCACACTCGGGAGAGGTTGGGCCGGCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000593362.1
CDS GCA 72 bp CCCCAAATCGCACATGATGCTCCAGCCACTCTGAGCTaGGGACCGCTCCCATGCCCAGGTCTCTGCCTGGGA +
Preference number: 6 (lower is better)
Translates to: PQIAHDAPATLS*GPLPCPGLCLG
Trigger: TCCCAGGCAGAGACCTGGGCATGGGAGCGGTCCGCAGCTCAGAGTGGCTGGAGCATCATGTGCGATTTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596771.5
CDS CCA 72 bp CCCTCCTTCATGGGGAGGGATGGGAAAAGGACCAGCTaGCCCGAGCACTCCTGGAGCCACGTCCTAGTCTCG +
Preference number: 6 (lower is better)
Translates to: PSFMGRDGKRTS*PEHSWSHVLVS
Trigger: CGAGACTAGGACGTGGCTCCAGGAGTGCTCGGGCCAGCTGGTCCTTTTCCCATCCCTCCCCATGAAGGAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000447857.8
ENST00000593725.5
ENST00000594905.5
ENST00000596862.5
ENST00000597993.5
ENST00000598730.5
CDS CCA 72 bp CGGGTCTGGGGTCTTCGCCTCCGAAGCTCTCCAGGTTaGCTGGCTCCTCAGCTTCTGGGCATCCAGATGGCA +
Preference number: 6 (lower is better)
Translates to: RVWGLRLRSSPG*LAPQLLGIQMA
Trigger: TGCCATCTGGATGCCCAGAAGCTGAGGAGCCAGCCAACCTGGAGAGCTTCGGAGGCGAAGACCCCAGACCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447857.8
ENST00000594043.5
ENST00000595828.5
ENST00000596130.5
ENST00000596771.5
ENST00000600570.1
CDS CCA 72 bp CCTGCTGCTCCCCTGGGTTCCAACTCAGGATGTACATaGTCCCCCAAGCCCAGGCCACCTCCTCCTCATCCC +
Preference number: 6 (lower is better)
Translates to: PAAPLGSNSGCT*SPKPRPPPPHP
Trigger: GGGATGAGGAGGAGGTGGCCTGGGCTTGGGGGACCATGTACATCCTGAGTTGGAACCCAGGGGAGCAGCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000596771.5
CDS CAA 90 bp CCAAGCCACGTGAGCCCGCTGCCACCGTTCTGGAAACACGGGTCTTaGAAGAGAGGCCCTTCCAGGGTCTGGAACACCCTGGAGCCACGT +
Preference number: 6 (lower is better)
Translates to: PSHVSPLPPFWKHGS*KRGPSRVWNTLEPR
Trigger: ACGTGGCTCCAGGGTGTTCCAGACCCTGGAAGGGCCTCTCTTCAAAGACCCGTGTTTCCAGAACGGTGGCAGCGGGCTCACGTGGCTTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596771.5
CDS GCA 72 bp TATTTGCTCCTCCAAGCTGACCGGCATTCCCAGCCTTaGCTCCTCAGGCCGCTCCCGGAGGTACACTGGAGC +
Preference number: 6 (lower is better)
Translates to: YLLLQADRHSQP*LLRPLPEVHWS
Trigger: GCTCCAGTGTACCTCCGGGAGCGGCCTGAGGAGGCAAGGCTGGGAATGCCGGTCAGCTTGGAGGAGCAAATA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600895.1
CDS CCA 72 bp GCAAAGCTACCAGCCTCCCTCCTTCATGGGGAGGGATaGGAAAAGGACCAGCTGGCCCGAGCACTCCTGGAG +
Preference number: 6 (lower is better)
Translates to: AKLPASLLHGEG*EKDQLARALLE
Trigger: CTCCAGGAGTGCTCGGGCCAGCTGGTCCTTTTCCCATCCCTCCCCATGAAGGAGGGAGGCTGGTAGCTTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000447857.8
ENST00000593725.5
ENST00000594905.5
ENST00000595828.5
ENST00000596862.5
ENST00000597993.5
ENST00000598730.5
CDS CCA 72 bp CATCCAGATGGCAGTTGCCGGGAGGTCAGGGCTCCCTaGAAGGCGGTCTCCTCTTCCAGCTCTAATCCCCCA +
Preference number: 6 (lower is better)
Translates to: HPDGSCREVRAP*KAVSSSSSNPP
Trigger: TGGGGGATTAGAGCTGGAAGAGGAGACCGCCTTCCAGGGAGCCCTGACCTCCCGGCAACTGCCATCTGGATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000447857.8
ENST00000594043.5
ENST00000595828.5
ENST00000596771.5
ENST00000600570.1
CDS CCA 72 bp CATCCAGATGGCAGTTGCCGGGAGGTCAGGGCTCCCTaGAAGGCGGTCTCCTCTTCCAGCTCTAATCCCCTG +
Preference number: 6 (lower is better)
Translates to: HPDGSCREVRAP*KAVSSSSSNPL
Trigger: CAGGGGATTAGAGCTGGAAGAGGAGACCGCCTTCCAGGGAGCCCTGACCTCCCGGCAACTGCCATCTGGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596130.5
CDS CCA 72 bp AGCCCACTCTTCTCAGCTGGGCCCCTTCAGGTAGCCTaGCCACACAGGAAGGAGGGAGGAAGATGGCCTCTG +
Preference number: 6 (lower is better)
Translates to: SPLFSAGPLQVA*PHRKEGGRWPL
Trigger: CAGAGGCCATCTTCCTCCCTCCTTCCTGTGTGGCCAGGCTACCTGAAGGGGCCCAGCTGAGAAGAGTGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596419.1
CDS CCA 72 bp CACCCAGGCCGACCCAAAACCTTAGTGGCCGCACTCTaGGGGCTAGAGAGAGACCTGGGCGCTGCTATCATC +
Preference number: 6 (lower is better)
Translates to: HPGRPKTLVAAL*GLERDLGAAII
Trigger: GATGATAGCAGCGCCCAGGTCTCTCTCTAGCCCCCAGAGTGCGGCCACTAAGGTTTTGGGTCGGCCTGGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596771.5
CDS CCA 72 bp GCAAAGCTACCAGCCTCCCTCCTTCATGGGGAGGGATaGGAAAAGGACCAGCTGGCCCGAGCACTCCTCAGC +
Preference number: 6 (lower is better)
Translates to: AKLPASLLHGEG*EKDQLARALLS
Trigger: GCTGAGGAGTGCTCGGGCCAGCTGGTCCTTTTCCCATCCCTCCCCATGAAGGAGGGAGGCTGGTAGCTTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596771.5
CDS CCA 72 bp GCAAAGCTACCAGCCTCCCTCCTTCATGGGGAGGGATaGGAAAAGGACCAGCTGGCCCGAGCACTCCTCGTG +
Preference number: 6 (lower is better)
Translates to: AKLPASLLHGEG*EKDQLARALLV
Trigger: CACGAGGAGTGCTCGGGCCAGCTGGTCCTTTTCCCATCCCTCCCCATGAAGGAGGGAGGCTGGTAGCTTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594043.5
CDS CAA 90 bp AGGCGTGCTGACCCCTCCTCAGCTGTCTCCATGCTCCGCTGCAATTaGGCATTCTCCCCAACCAGACGTCGGTTGCTGAGCTCCAGGTCC +
Preference number: 6 (lower is better)
Translates to: RRADPSSAVSMLRCN*AFSPTRRRLLSSRS
Trigger: GGACCTGGAGCTCAGCAACCGACGTCTGGTTGGGGAGAATGCCAAATTGCAGCGGAGCATGGAGACAGCTGAGGAGGGGTCAGCACGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000447857.8
ENST00000593631.1
ENST00000595828.5
ENST00000596130.5
ENST00000596771.5
ENST00000600570.1
CDS TCA 72 bp GGACACAACGGACATCCACGAACGACGAACGGCAGTTaGGTTGGGGGAGGTGCGCGTGAGCTTTTCCCGCCA +
Preference number: 6 (lower is better)
Translates to: GHNGHPRTTNGS*VGGGARELFPP
Trigger: TGGCGGGAAAAGCTCACGCGCACCTCCCCCAACTCAACTGCCGTTCGTCGTTCGTGGATGTCCGTTGTGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000600895.1
CDS GCA 72 bp TATTTGCTCCTCCAAGCTGACCGGCATTCCCAGCCTTaGCTCCTCAGGCCGCTCCCGGAGGTACATTTCCGC +
Preference number: 6 (lower is better)
Translates to: YLLLQADRHSQP*LLRPLPEVHFR
Trigger: GCGGAAATGTACCTCCGGGAGCGGCCTGAGGAGGCAAGGCTGGGAATGCCGGTCAGCTTGGAGGAGCAAATA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000447857.8
ENST00000594043.5
ENST00000596771.5
ENST00000596862.5
CDS GCA 72 bp TATTTGCTCCTCCAAGCTGACCGGCATTCCCAGCCTTaGCTCCTCAGGCCGCTCCCGGAGGTACAATCCGTC +
Preference number: 6 (lower is better)
Translates to: YLLLQADRHSQP*LLRPLPEVQSV
Trigger: GACGGATTGTACCTCCGGGAGCGGCCTGAGGAGGCAAGGCTGGGAATGCCGGTCAGCTTGGAGGAGCAAATA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594905.5
CDS CCA 72 bp GGGCCAGAAGGCTGCGATTCTGTTCCTCCAGGCTCCTaGCCAGAGTCTTCAGGTCCTCCAGCTCCTCATCCA +
Preference number: 6 (lower is better)
Translates to: GPEGCDSVPPGS*PESSGPPAPHP
Trigger: TGGATGAGGAGCTGGAGGACCTGAAGACTCTGGCCAGGAGCCTGGAGGAACAGAATCGCAGCCTTCTGGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000447857.8
ENST00000593631.1
ENST00000596130.5
ENST00000596771.5
ENST00000600570.1
CDS CAA 72 bp CAGGTCCTCCAGGCTGCTCAGCAGGTCAGCTGTGGCTaGTCTAGGGGCAAGGAAGGGGTTCAGGTCACTGTC +
Preference number: 6 (lower is better)
Translates to: QVLQAAQQVSCG*SRGKEGVQVTV
Trigger: GACAGTGACCTGAACCCCTTCCTTGCCCCTAGACAAGCCACAGCTGACCTGCTGAGCAGCCTGGAGGACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593631.1
CDS CAA 72 bp GTGAGCCCGCTGCCACCGTTCTGGAAACACGGGTCTTaGAAGAGAGGCCCTTCCAGGGTCTGGAACACCCTG +
Preference number: 6 (lower is better)
Translates to: VSPLPPFWKHGS*KRGPSRVWNTL
Trigger: CAGGGTGTTCCAGACCCTGGAAGGGCCTCTCTTCAAAGACCCGTGTTTCCAGAACGGTGGCAGCGGGCTCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596771.5
CDS CAA 90 bp ACCAGGAAAGTGTCCAAGTCCACAGTGGCCTTAGGGCCCTCCCCATaGGGGTCCAGGCTGTTGGCCAATGTTTGGAGGCGTGCATCCTGG +
Preference number: 6 (lower is better)
Translates to: TRKVSKSTVALGPSP*GSRLLANVWRRASW
Trigger: CCAGGATGCACGCCTCCAAACATTGGCCAACAGCCTGGACCCCAATGGGGAGGGCCCTAAGGCCACTGTGGACTTGGACACTTTCCTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000447857.8
ENST00000594043.5
ENST00000594905.5
ENST00000595828.5
ENST00000596771.5
ENST00000598730.5
ENST00000600570.1
CDS GCA 72 bp CGTGCTGACCCCTCCTCAGCTGTCTCCATGCTCCGCTaGAATTTGGCATTCTCCCCAACCAGACGTCGGTTG +
Preference number: 6 (lower is better)
Translates to: RADPSSAVSMLR*NLAFSPTRRRL
Trigger: CAACCGACGTCTGGTTGGGGAGAATGCCAAATTGCAGCGGAGCATGGAGACAGCTGAGGAGGGGTCAGCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000447857.8
ENST00000593631.1
ENST00000595828.5
ENST00000596130.5
ENST00000596771.5
ENST00000600570.1
CDS GCA 72 bp GGCCCAACCTCTCCCGAGTGTGGGCGCATGTGCGTGTaGATTTATGCAATCCGGGGGTGTAGCCACGTCTAT +
Preference number: 6 (lower is better)
Translates to: GPTSPECGRMCV*IYAIRGCSHVY
Trigger: ATAGACGTGGCTACACCCCCGGATTGCATAAATGCACACGCACATGCGCCCACACTCGGGAGAGGTTGGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000593362.1
CDS CCA 72 bp GATCCAGGGGGCAACCGAGGCTTGGCCTCAGACAAGTaGTGGCACCTGGGGCAATGGACTCAACTTCTCTTG +
Preference number: 6 (lower is better)
Translates to: DPGGNRGLASDK*WHLGQWTQLLL
Trigger: CAAGAGAAGTTGAGTCCATTGCCCCAGGTGCCACCACTTGTCTGAGGCCAAGCCTCGGTTGCCCCCTGGATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593725.5
CDS TCA 72 bp CCCCTCATAGGTCTGACTCAGCTGCTCCTCCAGGCGTaGAATCTCCAGCCTCAGTTCCTGCGTCGTCACTCT +
Preference number: 6 (lower is better)
Translates to: PLIGLTQLLLQA*NLQPQFLRRHS
Trigger: AGAGTGACGACGCAGGAACTGAGGCTGGAGATTTCACGCCTGGAGGAGCAGCTGAGTCAGACCTATGAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000447857.8
ENST00000593362.1
ENST00000596130.5
ENST00000600570.1
CDS TCA 72 bp CCGTCCGTTCACTCAACAGTAAGTGAGCTCCCACAGTaGGTCAGGAGTTGCTCTGGGGTCCCAGCCAACAGG +
Preference number: 6 (lower is better)
Translates to: PSVHSTVSELPQ*VRSCSGVPANR
Trigger: CCTGTTGGCTGGGACCCCAGAGCAACTCCTGACTCACTGTGGGAGCTCACTTACTGTTGAGTGAACGGACGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594905.5
ENST00000597993.5
CDS GCA 72 bp TATTTGCTCCTCCAAGCTGACCGGCATTCCCAGCCTTaGCTCCTCAGGCCGCTCCCGGAGGTACATTCTCTT +
Preference number: 6 (lower is better)
Translates to: YLLLQADRHSQP*LLRPLPEVHSL
Trigger: AAGAGAATGTACCTCCGGGAGCGGCCTGAGGAGGCAAGGCTGGGAATGCCGGTCAGCTTGGAGGAGCAAATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595828.5
CDS CCA 72 bp GCCACATCAGCCTGGATTTGGCCGGCTGGCTTCTCATaGGAGTTTGATCCTGACTTGCCCCTGCTCCTGATC +
Preference number: 6 (lower is better)
Translates to: ATSAWIWPAGFS*EFDPDLPLLLI
Trigger: GATCAGGAGCAGGGGCAAGTCAGGATCAAACTCCCATGAGAAGCCAGCCGGCCAAATCCAGGCTGATGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596771.5
CDS CCA 72 bp CAGCCCTGGGCAGCTGCCATTCTTGCCACATCAGCCTaGATTTGGCCGGCTGGCTTCTCATGGGAGTTTGAT +
Preference number: 6 (lower is better)
Translates to: QPWAAAILATSA*IWPAGFSWEFD
Trigger: ATCAAACTCCCATGAGAAGCCAGCCGGCCAAATCCAGGCTGATGTGGCAAGAATGGCAGCTGCCCAGGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596771.5
CDS CAA 72 bp ACAACGGACATCCACGAACGACGAACGGCAGTTGAGTaGGGGGAGGTGCGCGTGAGCTTTTCCCGCCAGAAA +
Preference number: 6 (lower is better)
Translates to: TTDIHERRTAVE*GEVRVSFSRQK
Trigger: TTTCTGGCGGGAAAAGCTCACGCGCACCTCCCCCAACTCAACTGCCGTTCGTCGTTCGTGGATGTCCGTTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000600895.1
CDS CAA 90 bp ACCTGTCCTCTGAGGGTCACAAGCTTCGAACGTGGAGTTGAGTATTaGCTCCTCCAAGCTGACCGGCATTCCCAGCCTTGCCTCCTCAGG +
Preference number: 6 (lower is better)
Translates to: TCPLRVTSFERGVEY*LLQADRHSQPCLLR
Trigger: CCTGAGGAGGCAAGGCTGGGAATGCCGGTCAGCTTGGAGGAGCAAATACTCAACTCCACGTTCGAAGCTTGTGACCCTCAGAGGACAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000596862.5
ENST00000600895.1
CDS TCA 72 bp CCCCTCATAGGTCTGACTCAGCTGCTCCTCCAGGCGTaGAATCTCCAGCCTCAGTTCCTAGGGAGACAGACA +
Preference number: 6 (lower is better)
Translates to: PLIGLTQLLLQA*NLQPQFLGRQT
Trigger: TGTCTGTCTCCCTAGGAACTGAGGCTGGAGATTTCACGCCTGGAGGAGCAGCTGAGTCAGACCTATGAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596419.1
CDS CCA 72 bp GGCTTGGCCTCAGACAAGTGGTGGCACCTGGGGCAATaGACTCAACTTCTCTTGGGCCTCAGTTTCTTCCTC +
Preference number: 6 (lower is better)
Translates to: GLASDKWWHLGQ*TQLLLGLSFFL
Trigger: GAGGAAGAAACTGAGGCCCAAGAGAAGTTGAGTCCATTGCCCCAGGTGCCACCACTTGTCTGAGGCCAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593725.5
CDS CCA 72 bp TGGGCAGCTGCCATTCTTGCCACATCAGCCTGGATTTaGCCGGCTGGCTTCTCATGGGAGTTTGATCCTGAC +
Preference number: 6 (lower is better)
Translates to: WAAAILATSAWI*PAGFSWEFDPD
Trigger: GTCAGGATCAAACTCCCATGAGAAGCCAGCCGGCCAAATCCAGGCTGATGTGGCAAGAATGGCAGCTGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596771.5
CDS CAA 90 bp ACTGAGGGCTCCTCACCTCTCCTTACCAAGTTTCTTTCCCCGTCCTaGCCTGAGAATGGAAATCTTAACCCCCACCGGGCACTGGGCTCT +
Preference number: 6 (lower is better)
Translates to: TEGSSPLLTKFLSPS*PENGNLNPHRALGS
Trigger: AGAGCCCAGTGCCCGGTGGGGGTTAAGATTTCCATTCTCAGGCAAGGACGGGGAAAGAAACTTGGTAAGGAGAGGTGAGGAGCCCTCAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593362.1
CDS TCA 72 bp TGCCGCTTCAAAGTGTCCTTCTCCATGGCCAGCTCCTaGCTTCTCTTTTTCACTCCATCCCGCTCGGCAAGC +
Preference number: 6 (lower is better)
Translates to: CRFKVSFSMASS*LLFFTPSRSAS
Trigger: GCTTGCCGAGCGGGATGGAGTGAAAAAGAGAAGTCAGGAGCTGGCCATGGAGAAGGACACTTTGAAGCGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000447857.8
ENST00000596130.5
ENST00000600570.1
CDS TCA 72 bp TGCCCCTTCCTACTCCATAGTCACACTCTGCCGCCCTaGCTCCAGGAAACAAAGAAGAGAGAGGGCACCTTC +
Preference number: 6 (lower is better)
Translates to: CPFLLHSHTLPP*LQETKKREGTF
Trigger: GAAGGTGCCCTCTCTCTTCTTTGTTTCCTGGAGTCAGGGCGGCAGAGTGTGACTATGGAGTAGGAAGGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593631.1
CDS GCA 72 bp GTGACCTCTGCCCCTTCCTACTCCATAGTCACACTCTaGCGCCCTGACTCCAGGAAACAAAGAAGAGAGAGG +
Preference number: 6 (lower is better)
Translates to: VTSAPSYSIVTL*RPDSRKQRRER
Trigger: CCTCTCTCTTCTTTGTTTCCTGGAGTCAGGGCGGCAGAGTGTGACTATGGAGTAGGAAGGGGCAGAGGTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593631.1
CDS CAA 72 bp GCCACACCCCACACAGAGGGTTGGAGAGATCAGCAGTaGCCACTTCCTGTTTCTGTCGAATGGCCTCGATCT +
Preference number: 6 (lower is better)
Translates to: ATPHTEGWRDQQ*PLPVSVEWPRS
Trigger: AGATCGAGGCCATTCGACAGAAACAGGAAGTGGCAACTGCTGATCTCTCCAACCCTCTGTGTGGGGTGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000447857.8
ENST00000593362.1
ENST00000596419.1
CDS TCA 72 bp CCCCATGTAGTTGACAGGCAGCAATCCAGTCACGCATaGCAACCAGGAAAGTGTCCAAGTCCACAGTGGCCT +
Preference number: 6 (lower is better)
Translates to: PHVVDRQQSSHA*QPGKCPSPQWP
Trigger: AGGCCACTGTGGACTTGGACACTTTCCTGGTTGTCATGCGTGACTGGATTGCTGCCTGTCAACTACATGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447857.8
ENST00000594043.5
ENST00000595828.5
ENST00000596771.5
ENST00000598730.5
ENST00000600570.1
CDS GCA 72 bp CCTCACCTCTCCTTACCAAGTTTCTTTCCCCGTCCTTaGCTGAGAATGGAAATCTTAACCCCCACCGGGCAC +
Preference number: 6 (lower is better)
Translates to: PHLSLPSFFPRP*LRMEILTPTGH
Trigger: GTGCCCGGTGGGGGTTAAGATTTCCATTCTCAGGCAAGGACGGGGAAAGAAACTTGGTAAGGAGAGGTGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593362.1
CDS CCA 72 bp ACATCGCGAGTGCGCTCAGAGAGGATGGTGTCTCTTTaGCAAATGAGGTGTTCACACTCAAAGAGCTGCCGC +
Preference number: 6 (lower is better)
Translates to: TSRVRSERMVSL*QMRCSHSKSCR
Trigger: GCGGCAGCTCTTTGAGTGTGAACACCTCATTTGCCAAAGAGACACCATCCTCTCTGAGCGCACTCGCGATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000447857.8
ENST00000596130.5
ENST00000600570.1
CDS TCA 72 bp CAGTGTGATATAACCTCAGGGACATTCCCACACTACTaGCATTCTGAGGTCTCCCCAAGACAGGCTGCTGGG +
Preference number: 6 (lower is better)
Translates to: QCDITSGTFPHY*HSEVSPRQAAG
Trigger: CCCAGCAGCCTGTCTTGGGGAGACCTCAGAATGTCAGTAGTGTGGGAATGTCCCTGAGGTTATATCACACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596771.5
CDS CCA 72 bp CTGGAAGTTTCTCTGTCCCCCAGCTGGGGCTTCAGATaGAAACTCAGTTTCCTCACTGGTCTCATGGATGAC +
Preference number: 6 (lower is better)
Translates to: LEVSLSPSWGFR*KLSFLTGLMDD
Trigger: GTCATCCATGAGACCAGTGAGGAAACTGAGTTTCCATCTGAAGCCCCAGCTGGGGGACAGAGAAACTTCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000447857.8
ENST00000593362.1
ENST00000600570.1
CDS CAA 72 bp TCCTCACCTCTCCTTACCAAGTTTCTTTCCCCGTCCTaGCCTGAGAATGGAAATCTTAACCCCCACCGGGCA +
Preference number: 6 (lower is better)
Translates to: SSPLLTKFLSPS*PENGNLNPHRA
Trigger: TGCCCGGTGGGGGTTAAGATTTCCATTCTCAGGCAAGGACGGGGAAAGAAACTTGGTAAGGAGAGGTGAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593362.1
CDS TCA 72 bp GAGTGCGCTCAGAGAGGATGGTGTCTCTTTGGCAAATaGGGTGTTCACACTCAAAGAGCTGCCGCTTCAAAG +
Preference number: 6 (lower is better)
Translates to: ECAQRGWCLFGK*GVHTQRAAASK
Trigger: CTTTGAAGCGGCAGCTCTTTGAGTGTGAACACCTCATTTGCCAAAGAGACACCATCCTCTCTGAGCGCACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000447857.8
ENST00000596130.5
ENST00000600570.1
CDS CAA 72 bp ACACACACACACACACACACACGTCCTGGGGTCTATTaGTCTACTGTTGTAGCCACAACACCTGCAGATGGC +
Preference number: 6 (lower is better)
Translates to: THTHTHTRPGVY*STVVATTPADG
Trigger: GCCATCTGCAGGTGTTGTGGCTACAACAGTAGACAAATAGACCCCAGGACGTGTGTGTGTGTGTGTGTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593725.5