Pregenerated sensors for KARS1 (Homo sapiens)
Ensembl gene IDs: ENSG00000065427Ensembl transcript IDs: ENST00000319410.9, ENST00000564578.5, ENST00000565738.1, ENST00000566560.5, ENST00000566772.1, ENST00000568378.5, ENST00000568682.5, ENST00000569298.1, ENST00000570215.1
Found 110 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGTGGATGGCCCTATACCTTGTCCATTATCTTGGAAGTCAGGTCCTaGCTTCCTAATCAGGACAAGGTAGAACAGAGACGATGGCAAGAA | + |
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Preference number: 1 (lower is better) Translates to: CGWPYTLSIILEVRS*LPNQDKVEQRRWQE Trigger: TTCTTGCCATCGTCTCTGTTCTACCTTGTCCTGATTAGGAAGGCAGGACCTGACTTCCAAGATAATGGACAAGGTATAGGGCCATCCACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566772.1 |
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| 3UTR-3UTR TCA 90 bp | AGCTGCCGCTGCCGCATGGGATCATTCAGCTCAGTATACGCATTGCATATCTCTGCCGGAAGGGTGGGGTaGAGTCAACATCGTAGGCTT | + |
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Preference number: 2 (lower is better) Translates to: SCRCRMGSFSSVYALHISAGRVG*SQHRRL Trigger: AAGCCTACGATGTTGACTTCACCCCACCCTTCCGGC...AGAGATATGCAATGCGTATACTGAGCTGAATGATCCCATGCGGCAGCGGCAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000564578.5 |
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| 3UTR-3UTR CCA 90 bp | AGCTGCCGCTGCCGCATGGGATCATTCAGCTCAGTATACGCATTGCATATCTCTAAAGAGGTTCGTTTCTaGCAGCTTCATCCCCAGGGC | + |
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Preference number: 2 (lower is better) Translates to: SCRCRMGSFSSVYALHISKEVRF*QLHPQG Trigger: GCCCTGGGGATGAAGCTGCCAGAAACGAACCTCTTT...AGAGATATGCAATGCGTATACTGAGCTGAATGATCCCATGCGGCAGCGGCAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000564578.5 |
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| 3UTR-3UTR GCA 90 bp | AGCTGCCGCTGCCGCATGGGATCATTCAGCTCAGTATACGCATTGCATATCTCTCATAAACCCGGTCGATaGCACCAACCACAAGCATCT | + |
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Preference number: 2 (lower is better) Translates to: SCRCRMGSFSSVYALHISHKPGR*HQPQAS Trigger: AGATGCTTGTGGTTGGTGGCATCGACCGGGTTTATG...AGAGATATGCAATGCGTATACTGAGCTGAATGATCCCATGCGGCAGCGGCAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564578.5 |
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| 3UTR CAA 90 bp | GTGACATCATTAGCATGTGGATGGCCCTATACCTTGTCCATTATCTaGGAAGTCAGGTCCTGCCTTCCTAATCAGGACAAGGTAGAACAG | + |
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Preference number: 2 (lower is better) Translates to: VTSLACGWPYTLSII*EVRSCLPNQDKVEQ Trigger: CTGTTCTACCTTGTCCTGATTAGGAAGGCAGGACCTGACTTCCAAGATAATGGACAAGGTATAGGGCCATCCACATGCTAATGATGTCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566772.1 |
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| 3UTR-3UTR CCA 90 bp | ATATTGAATGTGACATCATTAGCATGTGGATGGCCCTATACCTTGTCCATTATCACACAGGATACGCTTTaGAAAAGGAAGGCAAGGGAG | + |
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Preference number: 2 (lower is better) Translates to: ILNVTSLACGWPYTLSIITQDTL*KRKARE Trigger: CTCCCTTGCCTTCCTTTTCCAAAGCGTATCCTGTGT...GATAATGGACAAGGTATAGGGCCATCCACATGCTAATGATGTCACATTCAATAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566772.1 |
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| 3UTR-3UTR CAA 90 bp | CATGTGGATGGCCCTATACCTTGTCCATTATCTTGGAAGTCAGGTCCTGCCTTCGACACAGGATACGCTTaGGAAAAGGAAGGCAAGGGA | + |
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Preference number: 3 (lower is better) Translates to: HVDGPIPCPLSWKSGPAFDTGYA*EKEGKG Trigger: TCCCTTGCCTTCCTTTTCCAAAGCGTATCCTGTGTC...GAAGGCAGGACCTGACTTCCAAGATAATGGACAAGGTATAGGGCCATCCACATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566772.1 |
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| 3UTR CCA 72 bp | GAATACATATTGAATGTGACATCATTAGCATGTGGATaGCCCTATACCTTGTCCATTATCTTGGAAGTCAGG | + |
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Preference number: 3 (lower is better) Translates to: EYILNVTSLACG*PYTLSIILEVR Trigger: CCTGACTTCCAAGATAATGGACAAGGTATAGGGCCATCCACATGCTAATGATGTCACATTCAATATGTATTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566772.1 |
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| CDS-3UTR GCA 90 bp | AGCTGCCGCTGCCGCATGGGATCATTCAGCTCAGTATACGCATTGCATATCTCTTTCACCTCGGCCGCCTaGACGGCCGCCATCTTCCCG | + |
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Preference number: 4 (lower is better) Translates to: SCRCRMGSFSSVYALHISFTSAA*TAAIFP Trigger: CGGGAAGATGGCGGCCGTGCAGGCGGCCGAGGTGAA...AGAGATATGCAATGCGTATACTGAGCTGAATGATCCCATGCGGCAGCGGCAGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564578.5 |
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| CDS-3UTR TCA 90 bp | AGCTGCCGCTGCCGCATGGGATCATTCAGCTCAGTATACGCATTGCATATCTCTAGTCGCAGTTCCCTGTaGCCCCACTCTGCCCAGGAG | + |
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Preference number: 4 (lower is better) Translates to: SCRCRMGSFSSVYALHISSRSSL*PHSAQE Trigger: CTCCTGGGCAGAGTGGGGTCACAGGGAACTGCGACT...AGAGATATGCAATGCGTATACTGAGCTGAATGATCCCATGCGGCAGCGGCAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000564578.5 |
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| CDS-3UTR GCA 90 bp | AGCTGCCGCTGCCGCATGGGATCATTCAGCTCAGTATACGCATTGCATATCTCTCTCGATCAATGCCCATaGCCCAGCCAGCTGTGGGGG | + |
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Preference number: 4 (lower is better) Translates to: SCRCRMGSFSSVYALHISLDQCP*PSQLWG Trigger: CCCCCACAGCTGGCTGGGGCATGGGCATTGATCGAG...AGAGATATGCAATGCGTATACTGAGCTGAATGATCCCATGCGGCAGCGGCAGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564578.5 |
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| CDS-3UTR GCA 90 bp | CTGCTGTGTCCCCAATCTCTTAGAATAATGCCTGGCACAGGGCAGACATTAATATTCACCTCGGCCGCCTaGACGGCCGCCATCTTCCCG | + |
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Preference number: 4 (lower is better) Translates to: LLCPQSLRIMPGTGQTLIFTSAA*TAAIFP Trigger: CGGGAAGATGGCGGCCGTGCAGGCGGCCGAGGTGAA...TATTAATGTCTGCCCTGTGCCAGGCATTATTCTAAGAGATTGGGGACACAGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000319410.9 |
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| CDS-3UTR GCA 90 bp | TCCCTGCTGTGTCCCCAATCTCTTAGAATAATGCCTGGCACAGGGCAGACATTACTCGATCAATGCCCATaGCCCAGCCAGCTGTGGGGG | + |
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Preference number: 4 (lower is better) Translates to: SLLCPQSLRIMPGTGQTLLDQCP*PSQLWG Trigger: CCCCCACAGCTGGCTGGGGCATGGGCATTGATCGAG...TAATGTCTGCCCTGTGCCAGGCATTATTCTAAGAGATTGGGGACACAGCAGGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000319410.9 |
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| CDS-3UTR GCA 90 bp | AGCTGCCGCTGCCGCATGGGATCATTCAGCTCAGTATACGCATTGCATATCTCTCCTGTGACCCCACTCTaGCCAGGAGGTTTTGCGCAG | + |
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Preference number: 4 (lower is better) Translates to: SCRCRMGSFSSVYALHISPVTPL*PGGFAQ Trigger: CTGCGCAAAACCTCCTGGGCAGAGTGGGGTCACAGG...AGAGATATGCAATGCGTATACTGAGCTGAATGATCCCATGCGGCAGCGGCAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000564578.5 |
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| CDS-3UTR TCA 90 bp | AGCTGCCGCTGCCGCATGGGATCATTCAGCTCAGTATACGCATTGCATATCTCTGTGAAAGGAGCAAGTTaGCCCAGTCGCAGTTCCCTG | + |
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Preference number: 4 (lower is better) Translates to: SCRCRMGSFSSVYALHISVKGAS*PSRSSL Trigger: CAGGGAACTGCGACTGGGTCAACTTGCTCCTTTCAC...AGAGATATGCAATGCGTATACTGAGCTGAATGATCCCATGCGGCAGCGGCAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564578.5 |
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| CDS-3UTR TCA 90 bp | AGCTGCCGCTGCCGCATGGGATCATTCAGCTCAGTATACGCATTGCATATCTCTCCTTGTGAGGCGCTGTaGAAGGAGCAAGTTGACCCA | + |
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Preference number: 4 (lower is better) Translates to: SCRCRMGSFSSVYALHISPCEAL*KEQVDP Trigger: TGGGTCAACTTGCTCCTTTCACAGCGCCTCACAAGG...AGAGATATGCAATGCGTATACTGAGCTGAATGATCCCATGCGGCAGCGGCAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564578.5 |
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| CDS-3UTR GCA 90 bp | AGCTGCCGCTGCCGCATGGGATCATTCAGCTCAGTATACGCATTGCATATCTCTAGCCTTACAGCAGCTTaGGTCAACATGGCAGAGCAC | + |
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Preference number: 4 (lower is better) Translates to: SCRCRMGSFSSVYALHISSLTAA*VNMAEH Trigger: GTGCTCTGCCATGTTGACGCAAGCTGCTGTAAGGCT...AGAGATATGCAATGCGTATACTGAGCTGAATGATCCCATGCGGCAGCGGCAGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564578.5 |
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| CDS-3UTR CCA 90 bp | AGCTGCCGCTGCCGCATGGGATCATTCAGCTCAGTATACGCATTGCATATCTCTCAGCTTGCGTCAACATaGCAGAGCACCCTGGAACTA | + |
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Preference number: 4 (lower is better) Translates to: SCRCRMGSFSSVYALHISQLAST*QSTLEL Trigger: TAGTTCCAGGGTGCTCTGCCATGTTGACGCAAGCTG...AGAGATATGCAATGCGTATACTGAGCTGAATGATCCCATGCGGCAGCGGCAGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564578.5 |
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| CDS-3UTR TCA 90 bp | AGCTGCCGCTGCCGCATGGGATCATTCAGCTCAGTATACGCATTGCATATCTCTTTCTGGAATTGGCCATaGCTTGCAACTTCACCCCCT | + |
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Preference number: 4 (lower is better) Translates to: SCRCRMGSFSSVYALHISFWNWP*LATSPP Trigger: AGGGGGTGAAGTTGCAAGTCATGGCCAATTCCAGAA...AGAGATATGCAATGCGTATACTGAGCTGAATGATCCCATGCGGCAGCGGCAGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000564578.5 |
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| CDS-3UTR TCA 90 bp | AGCTGCCGCTGCCGCATGGGATCATTCAGCTCAGTATACGCATTGCATATCTCTAATGACTTGTCCTTGTaGGGCGCTGTGAAAGGAGCA | + |
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Preference number: 4 (lower is better) Translates to: SCRCRMGSFSSVYALHISNDLSL*GAVKGA Trigger: TGCTCCTTTCACAGCGCCTCACAAGGACAAGTCATT...AGAGATATGCAATGCGTATACTGAGCTGAATGATCCCATGCGGCAGCGGCAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564578.5 |
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| CDS-3UTR CCA 90 bp | TCCCTGCTGTGTCCCCAATCTCTTAGAATAATGCCTGGCACAGGGCAGACATTAAAAGAGGTTCGTTTCTaGCAGCTTCATCCCCAGGGC | + |
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Preference number: 4 (lower is better) Translates to: SLLCPQSLRIMPGTGQTLKEVRF*QLHPQG Trigger: GCCCTGGGGATGAAGCTGCCAGAAACGAACCTCTTT...TAATGTCTGCCCTGTGCCAGGCATTATTCTAAGAGATTGGGGACACAGCAGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000319410.9 |
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| CDS-3UTR CCA 90 bp | AGCTGCCGCTGCCGCATGGGATCATTCAGCTCAGTATACGCATTGCATATCTCTCTGCAGCCTTGGCCTTaGCCTGTTCTTCAAAAAGCT | + |
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Preference number: 4 (lower is better) Translates to: SCRCRMGSFSSVYALHISLQPWP*PVLQKA Trigger: AGCTTTTTGAAGAACAGGCCAAGGCCAAGGCTGCAG...AGAGATATGCAATGCGTATACTGAGCTGAATGATCCCATGCGGCAGCGGCAGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000564578.5 |
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| CDS-3UTR CCA 90 bp | TCCCTGCTGTGTCCCCAATCTCTTAGAATAATGCCTGGCACAGGGCAGACATTACAGCTTGCGTCAACATaGCAGAGCACCCTGGAACTA | + |
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Preference number: 4 (lower is better) Translates to: SLLCPQSLRIMPGTGQTLQLAST*QSTLEL Trigger: TAGTTCCAGGGTGCTCTGCCATGTTGACGCAAGCTG...TAATGTCTGCCCTGTGCCAGGCATTATTCTAAGAGATTGGGGACACAGCAGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000319410.9 |
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| CDS-3UTR TCA 90 bp | TTGTCTACTTCTTCTCCCTACCCCAAAGAAAGAATACAATTTCCACAAAAGCAGAGTCGCAGTTCCCTGTaGCCCCACTCTGCCCAGGAG | + |
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Preference number: 4 (lower is better) Translates to: LSTSSPYPKERIQFPQKQSRSSL*PHSAQE Trigger: CTCCTGGGCAGAGTGGGGTCACAGGGAACTGCGACT...CTGCTTTTGTGGAAATTGTATTCTTTCTTTGGGGTAGGGAGAAGAAGTAGACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000319410.9 |
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| CDS-3UTR TCA 90 bp | CTGTGTCCCCAATCTCTTAGAATAATGCCTGGCACAGGGCAGACATTAATACAACCTTGTGAGGCGCTGTaGAAGGAGCAAGTTGACCCA | + |
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Preference number: 4 (lower is better) Translates to: LCPQSLRIMPGTGQTLIQPCEAL*KEQVDP Trigger: TGGGTCAACTTGCTCCTTTCACAGCGCCTCACAAGG...TTGTATTAATGTCTGCCCTGTGCCAGGCATTATTCTAAGAGATTGGGGACACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000319410.9 |
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| CDS-3UTR TCA 90 bp | AGCTGCCGCTGCCGCATGGGATCATTCAGCTCAGTATACGCATTGCATATCTCTTCTTTGATCAGAAAATaGCTTGTCCTTGTGAGGCGC | + |
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Preference number: 4 (lower is better) Translates to: SCRCRMGSFSSVYALHISSLIRK*LVLVRR Trigger: GCGCCTCACAAGGACAAGTCATTTTCTGATCAAAGA...AGAGATATGCAATGCGTATACTGAGCTGAATGATCCCATGCGGCAGCGGCAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000564578.5 |
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| CDS-3UTR GCA 90 bp | AGCTGCCGCTGCCGCATGGGATCATTCAGCTCAGTATACGCATTGCATATCTCTAAGTGCCAACTGTTGTaGTTTCCAGTGTATCAGTGG | + |
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Preference number: 4 (lower is better) Translates to: SCRCRMGSFSSVYALHISKCQLL*FPVYQW Trigger: CCACTGATACACTGGAAAGCACAACAGTTGGCACTT...AGAGATATGCAATGCGTATACTGAGCTGAATGATCCCATGCGGCAGCGGCAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564578.5 |
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| CDS-3UTR GCA 90 bp | TGTCCCCAATCTCTTAGAATAATGCCTGGCACAGGGCAGACATTAATACAAATTCCTGTGACCCCACTCTaGCCAGGAGGTTTTGCGCAG | + |
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Preference number: 4 (lower is better) Translates to: CPQSLRIMPGTGQTLIQIPVTPL*PGGFAQ Trigger: CTGCGCAAAACCTCCTGGGCAGAGTGGGGTCACAGG...AATTTGTATTAATGTCTGCCCTGTGCCAGGCATTATTCTAAGAGATTGGGGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000319410.9 |
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| CDS-3UTR CCA 90 bp | AGCTGCCGCTGCCGCATGGGATCATTCAGCTCAGTATACGCATTGCATATCTCTGAAGCTCTTTTGGCATaGATCCTACATTTGGGTCCA | + |
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Preference number: 4 (lower is better) Translates to: SCRCRMGSFSSVYALHISEALLA*ILHLGP Trigger: TGGACCCAAATGTAGGATCCATGCCAAAAGAGCTTC...AGAGATATGCAATGCGTATACTGAGCTGAATGATCCCATGCGGCAGCGGCAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000564578.5 |
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| CDS-3UTR GCA 90 bp | AGCTGCCGCTGCCGCATGGGATCATTCAGCTCAGTATACGCATTGCATATCTCTCAGTGTATCAGTGGTTaGTACATTCTCCTTCTTGTC | + |
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Preference number: 4 (lower is better) Translates to: SCRCRMGSFSSVYALHISQCISG*YILLLV Trigger: GACAAGAAGGAGAATGTAGCAACCACTGATACACTG...AGAGATATGCAATGCGTATACTGAGCTGAATGATCCCATGCGGCAGCGGCAGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564578.5 |
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| CDS-3UTR GCA 90 bp | TCCCTGCTGTGTCCCCAATCTCTTAGAATAATGCCTGGCACAGGGCAGACATTAAAGTGCCAACTGTTGTaGTTTCCAGTGTATCAGTGG | + |
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Preference number: 4 (lower is better) Translates to: SLLCPQSLRIMPGTGQTLKCQLL*FPVYQW Trigger: CCACTGATACACTGGAAAGCACAACAGTTGGCACTT...TAATGTCTGCCCTGTGCCAGGCATTATTCTAAGAGATTGGGGACACAGCAGGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000319410.9 |
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| CDS-3UTR CCA 90 bp | CTGCTGTGTCCCCAATCTCTTAGAATAATGCCTGGCACAGGGCAGACATTAATACTGCAGCCTTGGCCTTaGCCTGTTCTTCAAAAAGCT | + |
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Preference number: 4 (lower is better) Translates to: LLCPQSLRIMPGTGQTLILQPWP*PVLQKA Trigger: AGCTTTTTGAAGAACAGGCCAAGGCCAAGGCTGCAG...TATTAATGTCTGCCCTGTGCCAGGCATTATTCTAAGAGATTGGGGACACAGCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000319410.9 |
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| CDS-3UTR TCA 90 bp | TTGTCTACTTCTTCTCCCTACCCCAAAGAAAGAATACAATTTCCACAAAAGCAGGCCGGAAGGGTGGGGTaGAGTCAACATCGTAGGCTT | + |
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Preference number: 4 (lower is better) Translates to: LSTSSPYPKERIQFPQKQAGRVG*SQHRRL Trigger: AAGCCTACGATGTTGACTTCACCCCACCCTTCCGGC...CTGCTTTTGTGGAAATTGTATTCTTTCTTTGGGGTAGGGAGAAGAAGTAGACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000319410.9 |
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| CDS-3UTR TCA 90 bp | TGTCCCCAATCTCTTAGAATAATGCCTGGCACAGGGCAGACATTAATACAAATTGTGAAAGGAGCAAGTTaGCCCAGTCGCAGTTCCCTG | + |
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Preference number: 4 (lower is better) Translates to: CPQSLRIMPGTGQTLIQIVKGAS*PSRSSL Trigger: CAGGGAACTGCGACTGGGTCAACTTGCTCCTTTCAC...AATTTGTATTAATGTCTGCCCTGTGCCAGGCATTATTCTAAGAGATTGGGGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000319410.9 |
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| CDS-3UTR TCA 90 bp | AGCTGCCGCTGCCGCATGGGATCATTCAGCTCAGTATACGCATTGCATATCTCTTTCAGCTCACTTCTTTaGTCAGAAAATGACTTGTCC | + |
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Preference number: 4 (lower is better) Translates to: SCRCRMGSFSSVYALHISFSSLL*SENDLS Trigger: GGACAAGTCATTTTCTGATCAAAGAAGTGAGCTGAA...AGAGATATGCAATGCGTATACTGAGCTGAATGATCCCATGCGGCAGCGGCAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000564578.5 |
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| 3UTR CAA 72 bp | TTAGCATGTGGATGGCCCTATACCTTGTCCATTATCTaGGAAGTCAGGTCCTGCCTTCCTAATCAGGACAAG | + |
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Preference number: 4 (lower is better) Translates to: LACGWPYTLSII*EVRSCLPNQDK Trigger: CTTGTCCTGATTAGGAAGGCAGGACCTGACTTCCAAGATAATGGACAAGGTATAGGGCCATCCACATGCTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566772.1 |
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| CDS-3UTR TCA 90 bp | TCCCTGCTGTGTCCCCAATCTCTTAGAATAATGCCTGGCACAGGGCAGACATTATTCAGCTCACTTCTTTaGTCAGAAAATGACTTGTCC | + |
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Preference number: 4 (lower is better) Translates to: SLLCPQSLRIMPGTGQTLFSSLL*SENDLS Trigger: GGACAAGTCATTTTCTGATCAAAGAAGTGAGCTGAA...TAATGTCTGCCCTGTGCCAGGCATTATTCTAAGAGATTGGGGACACAGCAGGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000319410.9 |
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| CDS-3UTR CCA 90 bp | GACATCATTAGCATGTGGATGGCCCTATACCTTGTCCATTATCTTGGAAGTCAGACACAGGATACGCTTTaGAAAAGGAAGGCAAGGGAG | + |
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Preference number: 4 (lower is better) Translates to: DIISMWMALYLVHYLGSQTQDTL*KRKARE Trigger: CTCCCTTGCCTTCCTTTTCCAAAGCGTATCCTGTGT...CTGACTTCCAAGATAATGGACAAGGTATAGGGCCATCCACATGCTAATGATGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566772.1 |
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| CDS-3UTR CCA 90 bp | GTGACATCATTAGCATGTGGATGGCCCTATACCTTGTCCATTATCTTGGAAGTCCCTTGTCCATTATCTTaGAAGTCAGGTCCTGCCTTC | + |
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Preference number: 4 (lower is better) Translates to: VTSLACGWPYTLSIILEVPCPLS*KSGPAF Trigger: GAAGGCAGGACCTGACTTCCAAGATAATGGACAAGG...GACTTCCAAGATAATGGACAAGGTATAGGGCCATCCACATGCTAATGATGTCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566772.1 |
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| CDS-3UTR CCA 90 bp | GAAAAGGGGACATTCTCATTAGGCATGAAGGATCCTGACACAGGATACGCTTTGGACATCATTAGCATGTaGATGGCCCTATACCTTGTC | + |
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Preference number: 4 (lower is better) Translates to: EKGTFSLGMKDPDTGYALDIISM*MALYLV Trigger: GACAAGGTATAGGGCCATCCACATGCTAATGATGTC...CAAAGCGTATCCTGTGTCAGGATCCTTCATGCCTAATGAGAATGTCCCCTTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000566772.1 |
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| CDS-3UTR TCA 90 bp | TGTCCCCAATCTCTTAGAATAATGCCTGGCACAGGGCAGACATTAATACAAATTTGTTGTTGGAGTCCGTaGGAAACATGGCGACTCGAT | + |
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Preference number: 4 (lower is better) Translates to: CPQSLRIMPGTGQTLIQICCWSP*ETWRLD Trigger: ATCGAGTCGCCATGTTTCTCACGGACTCCAACAACA...AATTTGTATTAATGTCTGCCCTGTGCCAGGCATTATTCTAAGAGATTGGGGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000319410.9 |
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| CDS-3UTR GCA 90 bp | TGTCCCCAATCTCTTAGAATAATGCCTGGCACAGGGCAGACATTAATACAAATTCATAAACCCGGTCGATaGCACCAACCACAAGCATCT | + |
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Preference number: 4 (lower is better) Translates to: CPQSLRIMPGTGQTLIQIHKPGR*HQPQAS Trigger: AGATGCTTGTGGTTGGTGGCATCGACCGGGTTTATG...AATTTGTATTAATGTCTGCCCTGTGCCAGGCATTATTCTAAGAGATTGGGGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000319410.9 |
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| CDS-3UTR GCA 90 bp | CTGCTGTGTCCCCAATCTCTTAGAATAATGCCTGGCACAGGGCAGACATTAATACAGTGTATCAGTGGTTaGTACATTCTCCTTCTTGTC | + |
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Preference number: 4 (lower is better) Translates to: LLCPQSLRIMPGTGQTLIQCISG*YILLLV Trigger: GACAAGAAGGAGAATGTAGCAACCACTGATACACTG...TATTAATGTCTGCCCTGTGCCAGGCATTATTCTAAGAGATTGGGGACACAGCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000319410.9 |
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| CDS-3UTR GCA 90 bp | GTTTGTCTACTTCTTCTCCCTACCCCAAAGAAAGAATACAATTTCCACAAAAGCAGCCTTACAGCAGCTTaGGTCAACATGGCAGAGCAC | + |
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Preference number: 4 (lower is better) Translates to: VCLLLLPTPKKEYNFHKSSLTAA*VNMAEH Trigger: GTGCTCTGCCATGTTGACGCAAGCTGCTGTAAGGCT...GCTTTTGTGGAAATTGTATTCTTTCTTTGGGGTAGGGAGAAGAAGTAGACAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000319410.9 |
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| CDS-3UTR TCA 90 bp | GTTTGTCTACTTCTTCTCCCTACCCCAAAGAAAGAATACAATTTCCACAAAAGCTTCTGGAATTGGCCATaGCTTGCAACTTCACCCCCT | + |
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Preference number: 4 (lower is better) Translates to: VCLLLLPTPKKEYNFHKSFWNWP*LATSPP Trigger: AGGGGGTGAAGTTGCAAGTCATGGCCAATTCCAGAA...GCTTTTGTGGAAATTGTATTCTTTCTTTGGGGTAGGGAGAAGAAGTAGACAAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000319410.9 |
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| CDS-3UTR TCA 90 bp | GTTTGTCTACTTCTTCTCCCTACCCCAAAGAAAGAATACAATTTCCACAAAAGCAATGACTTGTCCTTGTaGGGCGCTGTGAAAGGAGCA | + |
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Preference number: 4 (lower is better) Translates to: VCLLLLPTPKKEYNFHKSNDLSL*GAVKGA Trigger: TGCTCCTTTCACAGCGCCTCACAAGGACAAGTCATT...GCTTTTGTGGAAATTGTATTCTTTCTTTGGGGTAGGGAGAAGAAGTAGACAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000319410.9 |
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| CDS-3UTR TCA 90 bp | ATATTGAATGTGACATCATTAGCATGTGGATGGCCCTATACCTTGTCCATTATCAGGCATGAAGGATCCTaGCACAGGATACGCTTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: ILNVTSLACGWPYTLSIIRHEGS*HRIRFG Trigger: TCCAAAGCGTATCCTGTGTCAGGATCCTTCATGCCT...GATAATGGACAAGGTATAGGGCCATCCACATGCTAATGATGTCACATTCAATAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566772.1 |
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| CDS-3UTR GCA 90 bp | CTGTGTCCCCAATCTCTTAGAATAATGCCTGGCACAGGGCAGACATTAATACAACTTCAGCTGATGAATTaGTTGACTGCGGATTTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: LCPQSLRIMPGTGQTLIQLQLMN*LTADFV Trigger: TACAAAATCCGCAGTCAAGCAATTCATCAGCTGAAG...TTGTATTAATGTCTGCCCTGTGCCAGGCATTATTCTAAGAGATTGGGGACACAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000319410.9 |
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| CDS-3UTR CCA 90 bp | GAATACATATTGAATGTGACATCATTAGCATGTGGATGGCCCTATACCTTGTCCGTAGAACAGAGACGATaGCAAGAAAAGGGGACATTC | + |
|
Preference number: 4 (lower is better) Translates to: EYILNVTSLACGWPYTLSVEQRR*QEKGTF Trigger: GAATGTCCCCTTTTCTTGCCATCGTCTCTGTTCTAC...GGACAAGGTATAGGGCCATCCACATGCTAATGATGTCACATTCAATATGTATTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000566772.1 |
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| CDS-3UTR CCA 90 bp | ACATTCTCATTAGGCATGAAGGATCCTGACACAGGATACGCTTTGGAAAAGGAATCATTAGCATGTGGATaGCCCTATACCTTGTCCATT | + |
|
Preference number: 4 (lower is better) Translates to: TFSLGMKDPDTGYALEKESLACG*PYTLSI Trigger: AATGGACAAGGTATAGGGCCATCCACATGCTAATGA...TTCCTTTTCCAAAGCGTATCCTGTGTCAGGATCCTTCATGCCTAATGAGAATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566772.1 |
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| CDS-3UTR TCA 90 bp | TTGTCTACTTCTTCTCCCTACCCCAAAGAAAGAATACAATTTCCACAAAAGCAGTCTTTGATCAGAAAATaGCTTGTCCTTGTGAGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: LSTSSPYPKERIQFPQKQSLIRK*LVLVRR Trigger: GCGCCTCACAAGGACAAGTCATTTTCTGATCAAAGA...CTGCTTTTGTGGAAATTGTATTCTTTCTTTGGGGTAGGGAGAAGAAGTAGACAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000319410.9 |
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| CDS-3UTR CCA 90 bp | TGTCCCCAATCTCTTAGAATAATGCCTGGCACAGGGCAGACATTAATACAAATTTTTGTAGTATTGATTTaGGTCCACGCTCTCTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: CPQSLRIMPGTGQTLIQIFVVLI*VHALFL Trigger: GAGGAAGAGAGCGTGGACCCAAATCAATACTACAAA...AATTTGTATTAATGTCTGCCCTGTGCCAGGCATTATTCTAAGAGATTGGGGACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000319410.9 |
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| CDS-3UTR GCA 90 bp | CTGTGTCCCCAATCTCTTAGAATAATGCCTGGCACAGGGCAGACATTAATACAAGATGAATTGCTTGACTaGGGATTTTGTAGTATTGAT | + |
|
Preference number: 4 (lower is better) Translates to: LCPQSLRIMPGTGQTLIQDELLD*GFCSID Trigger: ATCAATACTACAAAATCCGCAGTCAAGCAATTCATC...TTGTATTAATGTCTGCCCTGTGCCAGGCATTATTCTAAGAGATTGGGGACACAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000319410.9 |
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| CDS CCA 90 bp | CCACCACCCACGAGAGCCGGCAAGAAGGCCCCGGCACAGCAGCCTTaGTGGGAACCTCGCGGCGCTTCCCAGCCCAGACTCTCCTACCGC | + |
|
Preference number: 5 (lower is better) Translates to: PPPTRAGKKAPAQQP*WEPRGASQPRLSYR Trigger: GCGGTAGGAGAGTCTGGGCTGGGAAGCGCCGCGAGGTTCCCACCAAGGCTGCTGTGCCGGGGCCTTCTTGCCGGCTCTCGTGGGTGGTGG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000570215.1 |
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| CDS CCA 90 bp | CCACCCACGAGAGCCGGCAAGAAGGCCCCGGCACAGCAGCCTTGGTaGGAACCTCGCGGCGCTTCCCAGCCCAGACTCTCCTACCGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: PPTRAGKKAPAQQPW*EPRGASQPRLSYRK Trigger: TTTGCGGTAGGAGAGTCTGGGCTGGGAAGCGCCGCGAGGTTCCCACCAAGGCTGCTGTGCCGGGGCCTTCTTGCCGGCTCTCGTGGGTGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000570215.1 |
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| CDS CCA 90 bp | CCCAGACCTTCCCTTGTGCTACTGAAGCCGCAGGCCTACCTGCTGTaGGAGTTCAGTGATTTGCCAGGGAGAGTTCCTACCTGCCACCTT | + |
|
Preference number: 5 (lower is better) Translates to: PRPSLVLLKPQAYLL*EFSDLPGRVPTCHL Trigger: AAGGTGGCAGGTAGGAACTCTCCCTGGCAAATCACTGAACTCCCACAGCAGGTAGGCCTGCGGCTTCAGTAGCACAAGGGAAGGTCTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000565738.1 |
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| CDS-3UTR CAA 90 bp | AGCTGCCGCTGCCGCATGGGATCATTCAGCTCAGTATACGCATTGCATATCTCTTCTGCCCAGGAGGTTTaGCGCAGGGACCCCCTAACA | + |
|
Preference number: 5 (lower is better) Translates to: SCRCRMGSFSSVYALHISSAQEV*RRDPLT Trigger: TGTTAGGGGGTCCCTGCGCAAAACCTCCTGGGCAGA...AGAGATATGCAATGCGTATACTGAGCTGAATGATCCCATGCGGCAGCGGCAGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000564578.5 |
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| CDS TCA 90 bp | AGGCTACTTGAGAACAAGACCAACCCAGACCTTCCCTTGTGCTACTaGAGCCGCAGGCCTACCTGCTGTGGGAGTTCAGTGATTTGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: RLLENKTNPDLPLCY*SRRPTCCGSSVICQ Trigger: CTGGCAAATCACTGAACTCCCACAGCAGGTAGGCCTGCGGCTTCAGTAGCACAAGGGAAGGTCTGGGTTGGTCTTGTTCTCAAGTAGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000565738.1 |
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| CDS GCA 90 bp | CAGGAGGTTTTGCGCAGGGACCCCCTAACAAGCCTTACAGCAGCTTaGGTCAACATGGCAGAGCACCCTGGAACTAATGATTACCACCAC | + |
|
Preference number: 5 (lower is better) Translates to: QEVLRRDPLTSLTAA*VNMAEHPGTNDYHH Trigger: GTGGTGGTAATCATTAGTTCCAGGGTGCTCTGCCATGTTGACGCAAGCTGCTGTAAGGCTTGTTAGGGGGTCCCTGCGCAAAACCTCCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000319410.9 ENST00000564578.5 ENST00000568378.5 ENST00000570215.1 |
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| CDS-3UTR CAA 90 bp | AGCTGCCGCTGCCGCATGGGATCATTCAGCTCAGTATACGCATTGCATATCTCTCCTGCAGCCTTGGCCTaGGCCTGTTCTTCAAAAAGC | + |
|
Preference number: 5 (lower is better) Translates to: SCRCRMGSFSSVYALHISPAALA*ACSSKS Trigger: GCTTTTTGAAGAACAGGCCAAGGCCAAGGCTGCAGG...AGAGATATGCAATGCGTATACTGAGCTGAATGATCCCATGCGGCAGCGGCAGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000564578.5 |
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| CDS-3UTR CAA 90 bp | TCCCTGCTGTGTCCCCAATCTCTTAGAATAATGCCTGGCACAGGGCAGACATTACCTGCAGCCTTGGCCTaGGCCTGTTCTTCAAAAAGC | + |
|
Preference number: 5 (lower is better) Translates to: SLLCPQSLRIMPGTGQTLPAALA*ACSSKS Trigger: GCTTTTTGAAGAACAGGCCAAGGCCAAGGCTGCAGG...TAATGTCTGCCCTGTGCCAGGCATTATTCTAAGAGATTGGGGACACAGCAGGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000319410.9 |
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| CDS-3UTR CAA 90 bp | TCCCTGCTGTGTCCCCAATCTCTTAGAATAATGCCTGGCACAGGGCAGACATTATCATCACCTGCAGCCTaGGCCTTGGCCTGTTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: SLLCPQSLRIMPGTGQTLSSPAA*ALACSS Trigger: TGAAGAACAGGCCAAGGCCAAGGCTGCAGGTGATGA...TAATGTCTGCCCTGTGCCAGGCATTATTCTAAGAGATTGGGGACACAGCAGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000319410.9 |
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| CDS-3UTR CAA 90 bp | AGCTGCCGCTGCCGCATGGGATCATTCAGCTCAGTATACGCATTGCATATCTCTGATTACCACCACTTCTaGCTCAGTTTCGGCTCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SCRCRMGSFSSVYALHISDYHHF*LSFGSL Trigger: CAGCGAGCCGAAACTGAGCAAGAAGTGGTGGTAATC...AGAGATATGCAATGCGTATACTGAGCTGAATGATCCCATGCGGCAGCGGCAGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564578.5 |
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| CDS-3UTR CAA 90 bp | AGCTGCCGCTGCCGCATGGGATCATTCAGCTCAGTATACGCATTGCATATCTCTAAGCCTTACAGCAGCTaGCGTCAACATGGCAGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: SCRCRMGSFSSVYALHISKPYSS*RQHGRA Trigger: TGCTCTGCCATGTTGACGCAAGCTGCTGTAAGGCTT...AGAGATATGCAATGCGTATACTGAGCTGAATGATCCCATGCGGCAGCGGCAGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564578.5 |
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| CDS-3UTR CAA 90 bp | CTGCTGTGTCCCCAATCTCTTAGAATAATGCCTGGCACAGGGCAGACATTAATATCTGCCCAGGAGGTTTaGCGCAGGGACCCCCTAACA | + |
|
Preference number: 5 (lower is better) Translates to: LLCPQSLRIMPGTGQTLISAQEV*RRDPLT Trigger: TGTTAGGGGGTCCCTGCGCAAAACCTCCTGGGCAGA...TATTAATGTCTGCCCTGTGCCAGGCATTATTCTAAGAGATTGGGGACACAGCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000319410.9 |
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| CDS-3UTR CAA 90 bp | AGCTGCCGCTGCCGCATGGGATCATTCAGCTCAGTATACGCATTGCATATCTCTTGTGAAAGGAGCAAGTaGACCCAGTCGCAGTTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: SCRCRMGSFSSVYALHISCERSK*TQSQFP Trigger: AGGGAACTGCGACTGGGTCAACTTGCTCCTTTCACA...AGAGATATGCAATGCGTATACTGAGCTGAATGATCCCATGCGGCAGCGGCAGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564578.5 |
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| CDS-3UTR CAA 90 bp | AGCTGCCGCTGCCGCATGGGATCATTCAGCTCAGTATACGCATTGCATATCTCTGCATGGATCCTACATTaGGGTCCACGCTCTCTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: SCRCRMGSFSSVYALHISAWILH*GPRSLP Trigger: AGGAAGAGAGCGTGGACCCAAATGTAGGATCCATGC...AGAGATATGCAATGCGTATACTGAGCTGAATGATCCCATGCGGCAGCGGCAGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564578.5 |
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| CDS TCA 90 bp | GCTCACTTCTTTGATCAGAAAATGACTTGTCCTTGTGAGGCGCTGTaGAAGGAGCAAGTTGACCCAGTCGCAGTTCCCTGTGACCCCACT | + |
|
Preference number: 5 (lower is better) Translates to: AHFFDQKMTCPCEAL*KEQVDPVAVPCDPT Trigger: AGTGGGGTCACAGGGAACTGCGACTGGGTCAACTTGCTCCTTTCACAGCGCCTCACAAGGACAAGTCATTTTCTGATCAAAGAAGTGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000319410.9 ENST00000564578.5 ENST00000570215.1 |
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| CDS TCA 90 bp | AAGTACTTCTTTGATCAGAAAATGACTTGTCCTTGTGAGGCGCTGTaGAAGGAGCAAGTTGACCCAGTCGCAGTTCCCTGTGACCCCACT | + |
|
Preference number: 5 (lower is better) Translates to: KYFFDQKMTCPCEAL*KEQVDPVAVPCDPT Trigger: AGTGGGGTCACAGGGAACTGCGACTGGGTCAACTTGCTCCTTTCACAGCGCCTCACAAGGACAAGTCATTTTCTGATCAAAGAAGTACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000568378.5 |
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| CDS-3UTR CAA 90 bp | AGCTGCCGCTGCCGCATGGGATCATTCAGCTCAGTATACGCATTGCATATCTCTAACAGAAGTACTTCCTaGATGTTGTTGGAGTCCGTG | + |
|
Preference number: 5 (lower is better) Translates to: SCRCRMGSFSSVYALHISNRSTS*MLLESV Trigger: CACGGACTCCAACAACATCAAGGAAGTACTTCTGTT...AGAGATATGCAATGCGTATACTGAGCTGAATGATCCCATGCGGCAGCGGCAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564578.5 |
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| CDS-3UTR CAA 90 bp | CTGCTGTGTCCCCAATCTCTTAGAATAATGCCTGGCACAGGGCAGACATTAATATGTGAAAGGAGCAAGTaGACCCAGTCGCAGTTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: LLCPQSLRIMPGTGQTLICERSK*TQSQFP Trigger: AGGGAACTGCGACTGGGTCAACTTGCTCCTTTCACA...TATTAATGTCTGCCCTGTGCCAGGCATTATTCTAAGAGATTGGGGACACAGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000319410.9 |
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| CDS-3UTR CAA 90 bp | CAAGAAAAGGGGACATTCTCATTAGGCATGAAGGATCCTGACACAGGATACGCTGACACAGGATACGCTTaGGAAAAGGAAGGCAAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: QEKGTFSLGMKDPDTGYADTGYA*EKEGKG Trigger: TCCCTTGCCTTCCTTTTCCAAAGCGTATCCTGTGTC...AGCGTATCCTGTGTCAGGATCCTTCATGCCTAATGAGAATGTCCCCTTTTCTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000566772.1 |
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| CDS-3UTR CAA 90 bp | CGTGAATACATATTGAATGTGACATCATTAGCATGTGGATGGCCCTATACCTTGAGGAGGAGGCAAGCATaGCAAGGCAGCTCATCACGT | + |
|
Preference number: 5 (lower is better) Translates to: REYILNVTSLACGWPYTLRRRQA*QGSSSR Trigger: ACGTGATGAGCTGCCTTGCAATGCTTGCCTCCTCCT...CAAGGTATAGGGCCATCCACATGCTAATGATGTCACATTCAATATGTATTCACG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566772.1 |
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| CDS-3UTR CAA 90 bp | GGGACATTCTCATTAGGCATGAAGGATCCTGACACAGGATACGCTTTGGAAAAGACCTTGTCCATTATCTaGGAAGTCAGGTCCTGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: GTFSLGMKDPDTGYALEKTLSII*EVRSCL Trigger: AAGGCAGGACCTGACTTCCAAGATAATGGACAAGGT...CTTTTCCAAAGCGTATCCTGTGTCAGGATCCTTCATGCCTAATGAGAATGTCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566772.1 |
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| CDS-3UTR CAA 90 bp | GAAAAGGGGACATTCTCATTAGGCATGAAGGATCCTGACACAGGATACGCTTTGGGATGGCCCTATACCTaGTCCATTATCTTGGAAGTC | + |
|
Preference number: 5 (lower is better) Translates to: EKGTFSLGMKDPDTGYALGWPYT*SIILEV Trigger: GACTTCCAAGATAATGGACAAGGTATAGGGCCATCC...CAAAGCGTATCCTGTGTCAGGATCCTTCATGCCTAATGAGAATGTCCCCTTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000566772.1 |
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| CDS TCA 90 bp | CATCACCTGCAGCCTTGGCCTAGAAGAGGAAAGAGAACCAAAAGGTaGCCTTCTTCTAAGATATCTCAGTGTGTGAGTGAACATGTTACC | + |
|
Preference number: 5 (lower is better) Translates to: HHLQPWPRRGKRTKR*PSSKISQCVSEHVT Trigger: GGTAACATGTTCACTCACACACTGAGATATCTTAGAAGAAGGTCACCTTTTGGTTCTCTTTCCTCTTCTAGGCCAAGGCTGCAGGTGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000569298.1 |
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| CDS GCA 90 bp | GACCTCAGAACACATACAAATTTCTCTGAAAGAAAACCCTTCTGCTaGTTGGGGCTCTGGGACTCCAAACAGGTTAATTCTCAGAGACTG | + |
|
Preference number: 5 (lower is better) Translates to: DLRTHTNFSERKPFC*LGLWDSKQVNSQRL Trigger: CAGTCTCTGAGAATTAACCTGTTTGGAGTCCCAGAGCCCCAAGCAGCAGAAGGGTTTTCTTTCAGAGAAATTTGTATGTGTTCTGAGGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000569298.1 |
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| CDS-3UTR CAA 90 bp | TTGTCTACTTCTTCTCCCTACCCCAAAGAAAGAATACAATTTCCACAAAAGCAGGCAGGAACTTGGCTTTaGTTCCCTGCTGTGTCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: LSTSSPYPKERIQFPQKQAGTWL*FPAVSP Trigger: TGGGGACACAGCAGGGAACAAAAGCCAAGTTCCTGC...CTGCTTTTGTGGAAATTGTATTCTTTCTTTGGGGTAGGGAGAAGAAGTAGACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000319410.9 |
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| CDS GCA 90 bp | ATCGACCTCAGAACACATACAAATTTCTCTGAAAGAAAACCCTTCTaGTGCTTGGGGCTCTGGGACTCCAAACAGGTTAATTCTCAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: IDLRTHTNFSERKPF*CLGLWDSKQVNSQR Trigger: TCTCTGAGAATTAACCTGTTTGGAGTCCCAGAGCCCCAAGCAGCAGAAGGGTTTTCTTTCAGAGAAATTTGTATGTGTTCTGAGGTCGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000569298.1 |
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| CDS CCA 90 bp | TCAGAACACATACAAATTTCTCTGAAAGAAAACCCTTCTGCTGCTTaGGGCTCTGGGACTCCAAACAGGTTAATTCTCAGAGACTGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: SEHIQISLKENPSAA*GSGTPNRLILRDCD Trigger: GTCACAGTCTCTGAGAATTAACCTGTTTGGAGTCCCAGAGCCCCAAGCAGCAGAAGGGTTTTCTTTCAGAGAAATTTGTATGTGTTCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000569298.1 |
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| CDS-3UTR CAA 90 bp | GTTTGTCTACTTCTTCTCCCTACCCCAAAGAAAGAATACAATTTCCACAAAAGCGATTACCACCACTTCTaGCTCAGTTTCGGCTCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: VCLLLLPTPKKEYNFHKSDYHHF*LSFGSL Trigger: CAGCGAGCCGAAACTGAGCAAGAAGTGGTGGTAATC...GCTTTTGTGGAAATTGTATTCTTTCTTTGGGGTAGGGAGAAGAAGTAGACAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000319410.9 |
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| CDS-3UTR CAA 90 bp | TTGTCTACTTCTTCTCCCTACCCCAAAGAAAGAATACAATTTCCACAAAAGCAGAAGCCTTACAGCAGCTaGCGTCAACATGGCAGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: LSTSSPYPKERIQFPQKQKPYSS*RQHGRA Trigger: TGCTCTGCCATGTTGACGCAAGCTGCTGTAAGGCTT...CTGCTTTTGTGGAAATTGTATTCTTTCTTTGGGGTAGGGAGAAGAAGTAGACAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000319410.9 |
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| CDS TCA 90 bp | AATCTTGTAGAGAAATTCTGGAAGTGTTACTCACATCCACACACCTaGCCCATCAGAACACTTTCTTGGCTGCTTTACTCTCTCTGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: NLVEKFWKCYSHPHT*PIRTLSWLLYSLCS Trigger: GGAACAGAGAGAGTAAAGCAGCCAAGAAAGTGTTCTGATGGGTCAGGTGTGTGGATGTGAGTAACACTTCCAGAATTTCTCTACAAGATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566560.5 |
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| CDS TCA 90 bp | TATAGAGAAAGCCCCTCTCTTTGTAGCACTACCTCATCTGGAATATaGTTCCATGTCTCAGGGCTGCTCTGCTTCTTTCTGTATAGATAT | + |
|
Preference number: 5 (lower is better) Translates to: YRESPSLCSTTSSGI*FHVSGLLCFFLYRY Trigger: ATATCTATACAGAAAGAAGCAGAGCAGCCCTGAGACATGGAATCATATTCCAGATGAGGTAGTGCTACAAAGAGAGGGGCTTTCTCTATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000565738.1 |
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| CDS-3UTR CAA 90 bp | GTTTGTCTACTTCTTCTCCCTACCCCAAAGAAAGAATACAATTTCCACAAAAGCCACAAAAGCAGGAACTaGGCTTTTGTTCCCTGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: VCLLLLPTPKKEYNFHKSHKSRN*AFVPCC Trigger: ACAGCAGGGAACAAAAGCCAAGTTCCTGCTTTTGTG...GCTTTTGTGGAAATTGTATTCTTTCTTTGGGGTAGGGAGAAGAAGTAGACAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000319410.9 |
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| CDS-3UTR CAA 90 bp | TTGTCTACTTCTTCTCCCTACCCCAAAGAAAGAATACAATTTCCACAAAAGCAGCCTTCAGCTGATGAATaGCTTGACTGCGGATTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: LSTSSPYPKERIQFPQKQPSADE*LDCGFC Trigger: ACAAAATCCGCAGTCAAGCAATTCATCAGCTGAAGG...CTGCTTTTGTGGAAATTGTATTCTTTCTTTGGGGTAGGGAGAAGAAGTAGACAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000319410.9 |
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| CDS-3UTR CAA 90 bp | GTTTGTCTACTTCTTCTCCCTACCCCAAAGAAAGAATACAATTTCCACAAAAGCAACAGAAGTACTTCCTaGATGTTGTTGGAGTCCGTG | + |
|
Preference number: 5 (lower is better) Translates to: VCLLLLPTPKKEYNFHKSNRSTS*MLLESV Trigger: CACGGACTCCAACAACATCAAGGAAGTACTTCTGTT...GCTTTTGTGGAAATTGTATTCTTTCTTTGGGGTAGGGAGAAGAAGTAGACAAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000319410.9 |
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| CDS-3UTR CAA 90 bp | GTTTGTCTACTTCTTCTCCCTACCCCAAAGAAAGAATACAATTTCCACAAAAGCTTTTGTAGTATTGATTaGGGTCCACGCTCTCTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: VCLLLLPTPKKEYNFHKSFCSID*GPRSLP Trigger: AGGAAGAGAGCGTGGACCCAAATCAATACTACAAAA...GCTTTTGTGGAAATTGTATTCTTTCTTTGGGGTAGGGAGAAGAAGTAGACAAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000319410.9 |
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| CDS CCA 72 bp | AGGCTGAGCGCGGGGCCTCGCGGATATCTGCGCGGGTaGGGTTGGGATCTTTCTCCTGGCTGCCTGGCGTCC | + |
|
Preference number: 6 (lower is better) Translates to: RLSAGPRGYLRG*GWDLSPGCLAS Trigger: GGACGCCAGGCAGCCAGGAGAAAGATCCCAACCCCACCCGCGCAGATATCCGCGAGGCCCCGCGCTCAGCCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566560.5 |
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| CDS CCA 72 bp | AGAGCCGGCAAGAAGGCCCCGGCACAGCAGCCTTGGTaGGAACCTCGCGGCGCTTCCCAGCCCAGACTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: RAGKKAPAQQPW*EPRGASQPRLS Trigger: GGAGAGTCTGGGCTGGGAAGCGCCGCGAGGTTCCCACCAAGGCTGCTGTGCCGGGGCCTTCTTGCCGGCTCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000570215.1 |
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| CDS CCA 72 bp | ACGAGAGCCGGCAAGAAGGCCCCGGCACAGCAGCCTTaGTGGGAACCTCGCGGCGCTTCCCAGCCCAGACTC | + |
|
Preference number: 6 (lower is better) Translates to: TRAGKKAPAQQP*WEPRGASQPRL Trigger: GAGTCTGGGCTGGGAAGCGCCGCGAGGTTCCCACCAAGGCTGCTGTGCCGGGGCCTTCTTGCCGGCTCTCGT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000570215.1 |
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| CDS CCA 72 bp | AGCGCGGGGCCTCGCGGATATCTGCGCGGGTGGGGTTaGGATCTTTCTCCTGGCTGCCTGGCGTCCATCTTG | + |
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Preference number: 6 (lower is better) Translates to: SAGPRGYLRGWG*DLSPGCLASIL Trigger: CAAGATGGACGCCAGGCAGCCAGGAGAAAGATCCCAACCCCACCCGCGCAGATATCCGCGAGGCCCCGCGCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000566560.5 |
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| CDS CAA 72 bp | GAGCGCGGGGCCTCGCGGATATCTGCGCGGGTGGGGTaGGGATCTTTCTCCTGGCTGCCTGGCGTCCATCTT | + |
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Preference number: 6 (lower is better) Translates to: ERGASRISARVG*GSFSWLPGVHL Trigger: AAGATGGACGCCAGGCAGCCAGGAGAAAGATCCCAACCCCACCCGCGCAGATATCCGCGAGGCCCCGCGCTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000566560.5 |
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| CDS TCA 72 bp | GAGAACAAGACCAACCCAGACCTTCCCTTGTGCTACTaGAGCCGCAGGCCTACCTGCTGTGGGAGTTCAGTG | + |
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Preference number: 6 (lower is better) Translates to: ENKTNPDLPLCY*SRRPTCCGSSV Trigger: CACTGAACTCCCACAGCAGGTAGGCCTGCGGCTTCAGTAGCACAAGGGAAGGTCTGGGTTGGTCTTGTTCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000565738.1 |
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| CDS CCA 72 bp | TCCCTTGTGCTACTGAAGCCGCAGGCCTACCTGCTGTaGGAGTTCAGTGATTTGCCAGGGAGAGTTCCTACC | + |
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Preference number: 6 (lower is better) Translates to: SLVLLKPQAYLL*EFSDLPGRVPT Trigger: GGTAGGAACTCTCCCTGGCAAATCACTGAACTCCCACAGCAGGTAGGCCTGCGGCTTCAGTAGCACAAGGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000565738.1 |
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| CDS TCA 72 bp | ACTGAAGCCGCAGGCCTACCTGCTGTGGGAGTTCAGTaGTTTGCCAGGGAGAGTTCCTACCTGCCACCTTTA | + |
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Preference number: 6 (lower is better) Translates to: TEAAGLPAVGVQ*FARESSYLPPL Trigger: TAAAGGTGGCAGGTAGGAACTCTCCCTGGCAAATCACTGAACTCCCACAGCAGGTAGGCCTGCGGCTTCAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000565738.1 |
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| CDS GCA 72 bp | TTGCGCAGGGACCCCCTAACAAGCCTTACAGCAGCTTaGGTCAACATGGCAGAGCACCCTGGAACTAATGAT | + |
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Preference number: 6 (lower is better) Translates to: LRRDPLTSLTAA*VNMAEHPGTND Trigger: ATCATTAGTTCCAGGGTGCTCTGCCATGTTGACGCAAGCTGCTGTAAGGCTTGTTAGGGGGTCCCTGCGCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000319410.9 ENST00000564578.5 ENST00000568378.5 ENST00000570215.1 |
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| CDS TCA 72 bp | TTTGATCAGAAAATGACTTGTCCTTGTGAGGCGCTGTaGAAGGAGCAAGTTGACCCAGTCGCAGTTCCCTGT | + |
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Preference number: 6 (lower is better) Translates to: FDQKMTCPCEAL*KEQVDPVAVPC Trigger: ACAGGGAACTGCGACTGGGTCAACTTGCTCCTTTCACAGCGCCTCACAAGGACAAGTCATTTTCTGATCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000319410.9 ENST00000564578.5 ENST00000568378.5 ENST00000570215.1 |
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| CDS TCA 72 bp | CAGGCGTCTCTTCAGCTCACTTCTTTGATCAGAAAATaGCTTGTCCTTGTGAGGCGCTGTGAAAGGAGCAAG | + |
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Preference number: 6 (lower is better) Translates to: QASLQLTSLIRK*LVLVRRCERSK Trigger: CTTGCTCCTTTCACAGCGCCTCACAAGGACAAGTCATTTTCTGATCAAAGAAGTGAGCTGAAGAGACGCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000319410.9 ENST00000564578.5 ENST00000570215.1 |
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| CDS CAA 90 bp | TATAATGGCACTGTCCTTAGTAAAGTAGCTTCAGACACAGGCTACTaGAGAACAAGACCAACCCAGACCTTCCCTTGTGCTACTGAAGCC | + |
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Preference number: 6 (lower is better) Translates to: YNGTVLSKVASDTGY*RTRPTQTFPCATEA Trigger: GGCTTCAGTAGCACAAGGGAAGGTCTGGGTTGGTCTTGTTCTCAAGTAGCCTGTGTCTGAAGCTACTTTACTAAGGACAGTGCCATTATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000565738.1 |
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| CDS GCA 72 bp | GACTTGCTGGGAATTCATTTCCTAGTAACTCCAAGATaGAGCCGTTTCTTTCAAAGACCTGGAGGTCAGGAC | + |
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Preference number: 6 (lower is better) Translates to: DLLGIHFLVTPR*SRFFQRPGGQD Trigger: GTCCTGACCTCCAGGTCTTTGAAAGAAACGGCTGCATCTTGGAGTTACTAGGAAATGAATTCCCAGCAAGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000569298.1 |
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| CDS CAA 72 bp | ACTGTCCTTAGTAAAGTAGCTTCAGACACAGGCTACTaGAGAACAAGACCAACCCAGACCTTCCCTTGTGCT | + |
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Preference number: 6 (lower is better) Translates to: TVLSKVASDTGY*RTRPTQTFPCA Trigger: AGCACAAGGGAAGGTCTGGGTTGGTCTTGTTCTCAAGTAGCCTGTGTCTGAAGCTACTTTACTAAGGACAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000565738.1 |
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| CDS CAA 90 bp | GAAGTGTTACTCACATCCACACACCTGACCCATCAGAACACTTTCTaGGCTGCTTTACTCTCTCTGTTCCTCTTATTTCTGACTATACCC | + |
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Preference number: 6 (lower is better) Translates to: EVLLTSTHLTHQNTF*AALLSLFLLFLTIP Trigger: GGGTATAGTCAGAAATAAGAGGAACAGAGAGAGTAAAGCAGCCAAGAAAGTGTTCTGATGGGTCAGGTGTGTGGATGTGAGTAACACTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566560.5 |
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| CDS TCA 72 bp | GAGAAATTCTGGAAGTGTTACTCACATCCACACACCTaGCCCATCAGAACACTTTCTTGGCTGCTTTACTCT | + |
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Preference number: 6 (lower is better) Translates to: EKFWKCYSHPHT*PIRTLSWLLYS Trigger: AGAGTAAAGCAGCCAAGAAAGTGTTCTGATGGGTCAGGTGTGTGGATGTGAGTAACACTTCCAGAATTTCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566560.5 |
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| CDS TCA 72 bp | CAGCCTTGGCCTAGAAGAGGAAAGAGAACCAAAAGGTaGCCTTCTTCTAAGATATCTCAGTGTGTGAGTGAA | + |
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Preference number: 6 (lower is better) Translates to: QPWPRRGKRTKR*PSSKISQCVSE Trigger: TTCACTCACACACTGAGATATCTTAGAAGAAGGTCACCTTTTGGTTCTCTTTCCTCTTCTAGGCCAAGGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000569298.1 |
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| CDS CAA 72 bp | CATACAAATTTCTCTGAAAGAAAACCCTTCTGCTGCTaGGGGCTCTGGGACTCCAAACAGGTTAATTCTCAG | + |
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Preference number: 6 (lower is better) Translates to: HTNFSERKPFCC*GLWDSKQVNSQ Trigger: CTGAGAATTAACCTGTTTGGAGTCCCAGAGCCCCAAGCAGCAGAAGGGTTTTCTTTCAGAGAAATTTGTATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000569298.1 |
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| CDS GCA 72 bp | ACACATACAAATTTCTCTGAAAGAAAACCCTTCTGCTaGTTGGGGCTCTGGGACTCCAAACAGGTTAATTCT | + |
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Preference number: 6 (lower is better) Translates to: THTNFSERKPFC*LGLWDSKQVNS Trigger: AGAATTAACCTGTTTGGAGTCCCAGAGCCCCAAGCAGCAGAAGGGTTTTCTTTCAGAGAAATTTGTATGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000569298.1 |
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| CDS CCA 72 bp | ATACAAATTTCTCTGAAAGAAAACCCTTCTGCTGCTTaGGGCTCTGGGACTCCAAACAGGTTAATTCTCAGA | + |
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Preference number: 6 (lower is better) Translates to: IQISLKENPSAA*GSGTPNRLILR Trigger: TCTGAGAATTAACCTGTTTGGAGTCCCAGAGCCCCAAGCAGCAGAAGGGTTTTCTTTCAGAGAAATTTGTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000569298.1 |
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| CDS TCA 72 bp | TTCCAACACACTTGTCAATTATGTGACTTGGACGAGTaGATTAACTTCTCACTTCTTGCTCAGTTTCGGCTC | + |
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Preference number: 6 (lower is better) Translates to: FQHTCQLCDLDE*INFSLLAQFRL Trigger: GAGCCGAAACTGAGCAAGAAGTGAGAAGTTAATTCACTCGTCCAAGTCACATAATTGACAAGTGTGTTGGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000568682.5 |
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| CDS CCA 72 bp | GGACTAAATTCCAACACACTTGTCAATTATGTGACTTaGACGAGTGAATTAACTTCTCACTTCTTGCTCAGT | + |
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Preference number: 6 (lower is better) Translates to: GLNSNTLVNYVT*TSELTSHFLLS Trigger: ACTGAGCAAGAAGTGAGAAGTTAATTCACTCGTCCAAGTCACATAATTGACAAGTGTGTTGGAATTTAGTCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000568682.5 |
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