RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KANK4 (Homo sapiens)

Ensembl gene IDs: ENSG00000132854

Ensembl transcript IDs: ENST00000317477.8, ENST00000354381.3, ENST00000371150.5, ENST00000371153.9

Found 741 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTTGCATGTGCTGGCCCCAGGGAATATGGAAGCTTCGGAAGGTATTaGTCTGCCCTGCCTGGGTCCCTTGCTCCTATTGCAGCCAGAAGT +
Preference number: 1 (lower is better)
Translates to: LACAGPREYGSFGRY*SALPGSLAPIAARS
Trigger: ACTTCTGGCTGCAATAGGAGCAAGGGACCCAGGCAGGGCAGAGCAATACCTTCCGAAGCTTCCATATTCCCTGGGGCCAGCACATGCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317477.8
ENST00000371153.9
3UTR CCA 90 bp TCAAAGTGTGGTTGTGGCTCGATAGCATCAGCATCTCCCAGGACCTaGTTAGAAATGCAGAATCTCAGGCCCCACCCCAGACCTACTGCC +
Preference number: 1 (lower is better)
Translates to: SKCGCGSIASASPRT*LEMQNLRPHPRPTA
Trigger: GGCAGTAGGTCTGGGGTGGGGCCTGAGATTCTGCATTTCTAACCAGGTCCTGGGAGATGCTGATGCTATCGAGCCACAACCACACTTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371153.9
3UTR GCA 90 bp TGTTTGGATGACACCGACGTACCCCTCACCTTGCACCTTGAACCCTaGTCTGAAGCCCGTGTAGTTTTCAGGCTTGGCCTAAGGCAAAAA +
Preference number: 1 (lower is better)
Translates to: CLDDTDVPLTLHLEP*SEARVVFRLGLRQK
Trigger: TTTTTGCCTTAGGCCAAGCCTGAAAACTACACGGGCTTCAGAGCAGGGTTCAAGGTGCAAGGTGAGGGGTACGTCGGTGTCATCCAAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
3UTR GCA 90 bp ATCGAAACAAAGCTCCCAAATGGTGCTTGTTCAGTTTCACCAGTCTaGACGGTGATTCTTCTAGGGTCCCCTACAGAATGCTTGCCAGGG +
Preference number: 1 (lower is better)
Translates to: IETKLPNGACSVSPV*TVILLGSPTECLPG
Trigger: CCCTGGCAAGCATTCTGTAGGGGACCCTAGAAGAATCACCGTGCAGACTGGTGAAACTGAACAAGCACCATTTGGGAGCTTTGTTTCGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
3UTR GCA 90 bp ACCACCGCGCTCGGCCACAAATTGGATTTTGAAACTTCCATCAGCTaGTTCTTGTGCAGCACCTCCCAGGAGGTAGGTTGTATGACAATT +
Preference number: 1 (lower is better)
Translates to: TTALGHKLDFETSIS*FLCSTSQEVGCMTI
Trigger: AATTGTCATACAACCTACCTCCTGGGAGGTGCTGCACAAGAAGCAGCTGATGGAAGTTTCAAAATCCAATTTGTGGCCGAGCGCGGTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371153.9
3UTR TCA 90 bp TATTTGCTTCTAGGGGATATGAGGGGAAAGCACCGGGAATTACCATaGGGTAATGGATACGGCTATGCAGGTGGCTTCTTGATGACAATA +
Preference number: 1 (lower is better)
Translates to: YLLLGDMRGKHRELP*GNGYGYAGGFLMTI
Trigger: TATTGTCATCAAGAAGCCACCTGCATAGCCGTATCCATTACCTCATGGTAATTCCCGGTGCTTTCCCCTCATATCCCCTAGAAGCAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317477.8
ENST00000371153.9
3UTR GCA 90 bp TTAAGATTTCTCTGTCAACCCCATCGAAACAAAGCTCCCAAATGGTaGTTGTTCAGTTTCACCAGTCTGCACGGTGATTCTTCTAGGGTC +
Preference number: 1 (lower is better)
Translates to: LRFLCQPHRNKAPKW*LFSFTSLHGDSSRV
Trigger: GACCCTAGAAGAATCACCGTGCAGACTGGTGAAACTGAACAAGCACCATTTGGGAGCTTTGTTTCGATGGGGTTGACAGAGAAATCTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
3UTR TCA 90 bp CCACCTCTGAGTTGCATCAACACATGTCATTGTGTTCTGGGACTCTaGGCCTCTCTTATGAATCACAATGGCAAAAGAAGTTTGCTGTAC +
Preference number: 1 (lower is better)
Translates to: PPLSCINTCHCVLGL*ASLMNHNGKRSLLY
Trigger: GTACAGCAAACTTCTTTTGCCATTGTGATTCATAAGAGAGGCTCAGAGTCCCAGAACACAATGACATGTGTTGATGCAACTCAGAGGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371153.9
3UTR CCA 90 bp ATTTTAAGATTTCTCTGTCAACCCCATCGAAACAAAGCTCCCAAATaGTGCTTGTTCAGTTTCACCAGTCTGCACGGTGATTCTTCTAGG +
Preference number: 1 (lower is better)
Translates to: ILRFLCQPHRNKAPK*CLFSFTSLHGDSSR
Trigger: CCTAGAAGAATCACCGTGCAGACTGGTGAAACTGAACAAGCACCATTTGGGAGCTTTGTTTCGATGGGGTTGACAGAGAAATCTTAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
3UTR TCA 90 bp CATCCTAATGAGCAGAATTATACAACAGGAATGTATGTGCATATTTaGCATAGTTTCTTCTCTAGAAGGGTGGCTCTCTGGCCTGTGACC +
Preference number: 1 (lower is better)
Translates to: HPNEQNYTTGMYVHI*HSFFSRRVALWPVT
Trigger: GGTCACAGGCCAGAGAGCCACCCTTCTAGAGAAGAAACTATGTCAAATATGCACATACATTCCTGTTGTATAATTCTGCTCATTAGGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
3UTR TCA 90 bp GCATCAACACATGTCATTGTGTTCTGGGACTCTGAGCCTCTCTTATaGATCACAATGGCAAAAGAAGTTTGCTGTACCATTGCTGTAGAT +
Preference number: 1 (lower is better)
Translates to: ASTHVIVFWDSEPLL*ITMAKEVCCTIAVD
Trigger: ATCTACAGCAATGGTACAGCAAACTTCTTTTGCCATTGTGATTCATAAGAGAGGCTCAGAGTCCCAGAACACAATGACATGTGTTGATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371153.9
3UTR-3UTR GCA 90 bp GTATTGCTCTGCCCTGCCTGGGTCCCTTGCTCCTATTGCAGCCAGAAGTCCCAACTGGCCTGTGACCTCTaGCCTCTTCAAGGGCGAGGG +
Preference number: 2 (lower is better)
Translates to: VLLCPAWVPCSYCSQKSQLACDL*PLQGRG
Trigger: CCCTCGCCCTTGAAGAGGGCAGAGGTCACAGGCCAG...TTGGGACTTCTGGCTGCAATAGGAGCAAGGGACCCAGGCAGGGCAGAGCAATAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317477.8
ENST00000371153.9
3UTR CAA 90 bp CCTTGCATGTGCTGGCCCCAGGGAATATGGAAGCTTCGGAAGGTATaGCTCTGCCCTGCCTGGGTCCCTTGCTCCTATTGCAGCCAGAAG +
Preference number: 2 (lower is better)
Translates to: PCMCWPQGIWKLRKV*LCPAWVPCSYCSQK
Trigger: CTTCTGGCTGCAATAGGAGCAAGGGACCCAGGCAGGGCAGAGCAATACCTTCCGAAGCTTCCATATTCCCTGGGGCCAGCACATGCAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317477.8
ENST00000371153.9
3UTR-3UTR GCA 90 bp GCTAATGTGCTCCTGCCTGCCTGCTTGCTACACAATGTTACAGAGGGTAGAGTCCTGGCCTGTGACCTCTaGCCTCTTCAAGGGCGAGGG +
Preference number: 2 (lower is better)
Translates to: ANVLLPACLLHNVTEGRVLACDL*PLQGRG
Trigger: CCCTCGCCCTTGAAGAGGGCAGAGGTCACAGGCCAG...GACTCTACCCTCTGTAACATTGTGTAGCAAGCAGGCAGGCAGGAGCACATTAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
3UTR-3UTR GCA 90 bp GTATTGCTCTGCCCTGCCTGGGTCCCTTGCTCCTATTGCAGCCAGAAGTCCCAACCCCTACAGAATGCTTaGCAGGGGGTTGGCTTAAAT +
Preference number: 2 (lower is better)
Translates to: VLLCPAWVPCSYCSQKSQPLQNA*QGVGLN
Trigger: ATTTAAGCCAACCCCCTGGCAAGCATTCTGTAGGGG...TTGGGACTTCTGGCTGCAATAGGAGCAAGGGACCCAGGCAGGGCAGAGCAATAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317477.8
ENST00000371153.9
3UTR-3UTR GCA 90 bp GCCCGTGTAGTTTTCAGGCTTGGCCTAAGGCAAAAACTACAAAGCATCCTAATGCTGGCCTGTGACCTCTaGCCTCTTCAAGGGCGAGGG +
Preference number: 2 (lower is better)
Translates to: ARVVFRLGLRQKLQSILMLACDL*PLQGRG
Trigger: CCCTCGCCCTTGAAGAGGGCAGAGGTCACAGGCCAG...CATTAGGATGCTTTGTAGTTTTTGCCTTAGGCCAAGCCTGAAAACTACACGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
3UTR-3UTR GCA 90 bp TTTCATGACTCACCACAGGGGCACCCAGCAAATTGGCATCTGAGCCAAAATGAGCCTGCCTGGGTCCCTTaGTCCTATTGCAGCCAGAAG +
Preference number: 2 (lower is better)
Translates to: FHDSPQGHPANWHLSQNEPAWVP*SYCSQK
Trigger: CTTCTGGCTGCAATAGGAGCAAGGGACCCAGGCAGG...CTCATTTTGGCTCAGATGCCAATTTGCTGGGTGCCCCTGTGGTGAGTCATGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317477.8
ENST00000371153.9
3UTR-3UTR CCA 90 bp ACCAGTCTGCACGGTGATTCTTCTAGGGTCCCCTACAGAATGCTTGCCAGGGGGGATGTTTTGGATGTTTaGATGACACCGACGTACCCC +
Preference number: 2 (lower is better)
Translates to: TSLHGDSSRVPYRMLARGDVLDV*MTPTYP
Trigger: GGGGTACGTCGGTGTCATCCAAACATCCAAAACATC...CCCCCTGGCAAGCATTCTGTAGGGGACCCTAGAAGAATCACCGTGCAGACTGGT
53% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
3UTR-3UTR CCA 90 bp GGTGCTTGTTCAGTTTCACCAGTCTGCACGGTGATTCTTCTAGGGTCCCCTACATGCTTGCCAGGGGGTTaGCTTAAATCCCCTCCCATC +
Preference number: 2 (lower is better)
Translates to: GACSVSPVCTVILLGSPTCLPGG*LKSPPI
Trigger: GATGGGAGGGGATTTAAGCCAACCCCCTGGCAAGCA...TGTAGGGGACCCTAGAAGAATCACCGTGCAGACTGGTGAAACTGAACAAGCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
3UTR-3UTR GCA 90 bp GCTCCCAAATGGTGCTTGTTCAGTTTCACCAGTCTGCACGGTGATTCTTCTAGGACGTACCCCTCACCTTaGACCTTGAACCCTGCTCTG +
Preference number: 2 (lower is better)
Translates to: APKWCLFSFTSLHGDSSRTYPSP*TLNPAL
Trigger: CAGAGCAGGGTTCAAGGTGCAAGGTGAGGGGTACGT...CCTAGAAGAATCACCGTGCAGACTGGTGAAACTGAACAAGCACCATTTGGGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
3UTR-3UTR TCA 90 bp TGGAAGCTTCGGAAGGTATTGCTCTGCCCTGCCTGGGTCCCTTGCTCCTATTGCATTGGAGCCACTAGATaGCTCAGAAATAGTCAAGAC +
Preference number: 2 (lower is better)
Translates to: WKLRKVLLCPAWVPCSYCIGATR*LRNSQD
Trigger: GTCTTGACTATTTCTGAGTCATCTAGTGGCTCCAAT...GCAATAGGAGCAAGGGACCCAGGCAGGGCAGAGCAATACCTTCCGAAGCTTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317477.8
ENST00000371153.9
3UTR-3UTR GCA 90 bp GGTGCTTGTTCAGTTTCACCAGTCTGCACGGTGATTCTTCTAGGGTCCCCTACATTGCACCTTGAACCCTaGTCTGAAGCCCGTGTAGTT +
Preference number: 2 (lower is better)
Translates to: GACSVSPVCTVILLGSPTLHLEP*SEARVV
Trigger: AACTACACGGGCTTCAGAGCAGGGTTCAAGGTGCAA...TGTAGGGGACCCTAGAAGAATCACCGTGCAGACTGGTGAAACTGAACAAGCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
3UTR CAA 90 bp GGCCCCACCCCAGACCTACTGCCTTCTAACAAGATCCCAGGTGATTaGTATGCACATAAATGTTCGCGAAGCACCGGGCTAGAACATTTA +
Preference number: 2 (lower is better)
Translates to: GPTPDLLPSNKIPGD*YAHKCSRSTGLEHL
Trigger: TAAATGTTCTAGCCCGGTGCTTCGCGAACATTTATGTGCATACAAATCACCTGGGATCTTGTTAGAAGGCAGTAGGTCTGGGGTGGGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371153.9
3UTR-3UTR GCA 90 bp AACAAAGCTCCCAAATGGTGCTTGTTCAGTTTCACCAGTCTGCACGGTGATTCTACGTACCCCTCACCTTaGACCTTGAACCCTGCTCTG +
Preference number: 2 (lower is better)
Translates to: NKAPKWCLFSFTSLHGDSTYPSP*TLNPAL
Trigger: CAGAGCAGGGTTCAAGGTGCAAGGTGAGGGGTACGT...AGAATCACCGTGCAGACTGGTGAAACTGAACAAGCACCATTTGGGAGCTTTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
3UTR-3UTR GCA 90 bp GCTCCCAAATGGTGCTTGTTCAGTTTCACCAGTCTGCACGGTGATTCTTCTAGGTCTAATGTGCTAATGTaGTCCTGCCTGCCTGCTTGC +
Preference number: 2 (lower is better)
Translates to: APKWCLFSFTSLHGDSSRSNVLM*SCLPAC
Trigger: GCAAGCAGGCAGGCAGGAGCACATTAGCACATTAGA...CCTAGAAGAATCACCGTGCAGACTGGTGAAACTGAACAAGCACCATTTGGGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
3UTR CAA 90 bp AGATTTCTCTGTCAACCCCATCGAAACAAAGCTCCCAAATGGTGCTaGTTCAGTTTCACCAGTCTGCACGGTGATTCTTCTAGGGTCCCC +
Preference number: 2 (lower is better)
Translates to: RFLCQPHRNKAPKWC*FSFTSLHGDSSRVP
Trigger: GGGGACCCTAGAAGAATCACCGTGCAGACTGGTGAAACTGAACAAGCACCATTTGGGAGCTTTGTTTCGATGGGGTTGACAGAGAAATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
3UTR-3UTR GCA 90 bp AAGTATTGCTTTTCTAATGTGCTAATGTGCTCCTGCCTGCCTGCTTGCTACACAACGTACCCCTCACCTTaGACCTTGAACCCTGCTCTG +
Preference number: 2 (lower is better)
Translates to: KYCFSNVLMCSCLPACYTTYPSP*TLNPAL
Trigger: CAGAGCAGGGTTCAAGGTGCAAGGTGAGGGGTACGT...TGTGTAGCAAGCAGGCAGGCAGGAGCACATTAGCACATTAGAAAAGCAATACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
3UTR-3UTR GCA 90 bp AAGCTCCCAAATGGTGCTTGTTCAGTTTCACCAGTCTGCACGGTGATTCTTCTAGTGCTAATGTGCTCCTaGCTGCCTGCTTGCTACACA +
Preference number: 2 (lower is better)
Translates to: KLPNGACSVSPVCTVILLVLMCS*LPACYT
Trigger: TGTGTAGCAAGCAGGCAGGCAGGAGCACATTAGCAC...TAGAAGAATCACCGTGCAGACTGGTGAAACTGAACAAGCACCATTTGGGAGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
3UTR-3UTR GCA 90 bp CAACCCCATCGAAACAAAGCTCCCAAATGGTGCTTGTTCAGTTTCACCAGTCTGCCCCTACAGAATGCTTaGCAGGGGGTTGGCTTAAAT +
Preference number: 2 (lower is better)
Translates to: QPHRNKAPKWCLFSFTSLPLQNA*QGVGLN
Trigger: ATTTAAGCCAACCCCCTGGCAAGCATTCTGTAGGGG...CAGACTGGTGAAACTGAACAAGCACCATTTGGGAGCTTTGTTTCGATGGGGTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
3UTR-3UTR GCA 90 bp CAAAGTGCTTCTTCTACCCTGTCAGATTTTAAGATTTCTCTGTCAACCCCATCGGGGTCCCCTACAGAATaGTTGCCAGGGGGTTGGCTT +
Preference number: 2 (lower is better)
Translates to: QSASSTLSDFKISLSTPSGSPTE*LPGGWL
Trigger: AAGCCAACCCCCTGGCAAGCATTCTGTAGGGGACCC...CGATGGGGTTGACAGAGAAATCTTAAAATCTGACAGGGTAGAAGAAGCACTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
3UTR-3UTR CCA 90 bp AAGGATAGGCCAGAGGCTTGCTACTCAAAGTGTGGTTGTGGCTCGATAGCATCAGCATCTCCCAGGACCTaGTTAGAAATGCAGAATCTC +
Preference number: 2 (lower is better)
Translates to: KDRPEACYSKCGCGSIASASPRT*LEMQNL
Trigger: GAGATTCTGCATTTCTAACCAGGTCCTGGGAGATGC...TGATGCTATCGAGCCACAACCACACTTTGAGTAGCAAGCCTCTGGCCTATCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371153.9
3UTR CAA 90 bp GCGCTCGGCCACAAATTGGATTTTGAAACTTCCATCAGCTGCTTCTaGTGCAGCACCTCCCAGGAGGTAGGTTGTATGACAATTTCTGTT +
Preference number: 2 (lower is better)
Translates to: ALGHKLDFETSISCF*CSTSQEVGCMTISV
Trigger: AACAGAAATTGTCATACAACCTACCTCCTGGGAGGTGCTGCACAAGAAGCAGCTGATGGAAGTTTCAAAATCCAATTTGTGGCCGAGCGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371153.9
3UTR-3UTR TCA 90 bp AAGCTCCCAAATGGTGCTTGTTCAGTTTCACCAGTCTGCACGGTGATTCTTCTATTTTGGATGTTTGGATaGCACCGACGTACCCCTCAC +
Preference number: 2 (lower is better)
Translates to: KLPNGACSVSPVCTVILLFWMFG*HRRTPH
Trigger: GTGAGGGGTACGTCGGTGTCATCCAAACATCCAAAA...TAGAAGAATCACCGTGCAGACTGGTGAAACTGAACAAGCACCATTTGGGAGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
3UTR-3UTR TCA 90 bp AACAAAGCTCCCAAATGGTGCTTGTTCAGTTTCACCAGTCTGCACGGTGATTCTTTTTGGATGTTTGGATaGCACCGACGTACCCCTCAC +
Preference number: 2 (lower is better)
Translates to: NKAPKWCLFSFTSLHGDSFWMFG*HRRTPH
Trigger: GTGAGGGGTACGTCGGTGTCATCCAAACATCCAAAA...AGAATCACCGTGCAGACTGGTGAAACTGAACAAGCACCATTTGGGAGCTTTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
3UTR-3UTR GCA 90 bp AAAGTGCTTCTTCTACCCTGTCAGATTTTAAGATTTCTCTGTCAACCCCATCGAGGGTCCCCTACAGAATaGTTGCCAGGGGGTTGGCTT +
Preference number: 2 (lower is better)
Translates to: KVLLLPCQILRFLCQPHRGSPTE*LPGGWL
Trigger: AAGCCAACCCCCTGGCAAGCATTCTGTAGGGGACCC...TCGATGGGGTTGACAGAGAAATCTTAAAATCTGACAGGGTAGAAGAAGCACTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
3UTR-3UTR CCA 90 bp CAACCCCATCGAAACAAAGCTCCCAAATGGTGCTTGTTCAGTTTCACCAGTCTGGATGTTTTGGATGTTTaGATGACACCGACGTACCCC +
Preference number: 2 (lower is better)
Translates to: QPHRNKAPKWCLFSFTSLDVLDV*MTPTYP
Trigger: GGGGTACGTCGGTGTCATCCAAACATCCAAAACATC...CAGACTGGTGAAACTGAACAAGCACCATTTGGGAGCTTTGTTTCGATGGGGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
3UTR-3UTR GCA 90 bp AAAGTGCTTCTTCTACCCTGTCAGATTTTAAGATTTCTCTGTCAACCCCATCGAACGTACCCCTCACCTTaGACCTTGAACCCTGCTCTG +
Preference number: 2 (lower is better)
Translates to: KVLLLPCQILRFLCQPHRTYPSP*TLNPAL
Trigger: CAGAGCAGGGTTCAAGGTGCAAGGTGAGGGGTACGT...TCGATGGGGTTGACAGAGAAATCTTAAAATCTGACAGGGTAGAAGAAGCACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
3UTR-3UTR GCA 90 bp GAACAGATATTTGCTTCTAGGGGATATGAGGGGAAAGCACCGGGAATTACCATGTCAGTTTCACCAGTCTaGACGGTGATTCTTCTAGGG +
Preference number: 2 (lower is better)
Translates to: EQIFASRGYEGKAPGITMSVSPV*TVILLG
Trigger: CCCTAGAAGAATCACCGTGCAGACTGGTGAAACTGA...CATGGTAATTCCCGGTGCTTTCCCCTCATATCCCCTAGAAGCAAATATCTGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317477.8
ENST00000371153.9
3UTR-3UTR CCA 90 bp AACAAAGCTCCCAAATGGTGCTTGTTCAGTTTCACCAGTCTGCACGGTGATTCTGATGTTTTGGATGTTTaGATGACACCGACGTACCCC +
Preference number: 2 (lower is better)
Translates to: NKAPKWCLFSFTSLHGDSDVLDV*MTPTYP
Trigger: GGGGTACGTCGGTGTCATCCAAACATCCAAAACATC...AGAATCACCGTGCAGACTGGTGAAACTGAACAAGCACCATTTGGGAGCTTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
3UTR-3UTR TCA 90 bp TGCCAAAGTGCTTCTTCTACCCTGTCAGATTTTAAGATTTCTCTGTCAACCCCATTTTGGATGTTTGGATaGCACCGACGTACCCCTCAC +
Preference number: 2 (lower is better)
Translates to: CQSASSTLSDFKISLSTPFWMFG*HRRTPH
Trigger: GTGAGGGGTACGTCGGTGTCATCCAAACATCCAAAA...TGGGGTTGACAGAGAAATCTTAAAATCTGACAGGGTAGAAGAAGCACTTTGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
3UTR-3UTR GCA 90 bp GCCAAAGTGCTTCTTCTACCCTGTCAGATTTTAAGATTTCTCTGTCAACCCCATTTGCACCTTGAACCCTaGTCTGAAGCCCGTGTAGTT +
Preference number: 2 (lower is better)
Translates to: AKVLLLPCQILRFLCQPHLHLEP*SEARVV
Trigger: AACTACACGGGCTTCAGAGCAGGGTTCAAGGTGCAA...ATGGGGTTGACAGAGAAATCTTAAAATCTGACAGGGTAGAAGAAGCACTTTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
3UTR-3UTR GCA 90 bp TGCCAAAGTGCTTCTTCTACCCTGTCAGATTTTAAGATTTCTCTGTCAACCCCATCCTGCCTGCCTGCTTaGTACACAATGTTACAGAGG +
Preference number: 2 (lower is better)
Translates to: CQSASSTLSDFKISLSTPSCLPA*YTMLQR
Trigger: CCTCTGTAACATTGTGTAGCAAGCAGGCAGGCAGGA...TGGGGTTGACAGAGAAATCTTAAAATCTGACAGGGTAGAAGAAGCACTTTGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
3UTR-3UTR GCA 90 bp AAAGTGCTTCTTCTACCCTGTCAGATTTTAAGATTTCTCTGTCAACCCCATCGAGTGCTAATGTGCTCCTaGCTGCCTGCTTGCTACACA +
Preference number: 2 (lower is better)
Translates to: KVLLLPCQILRFLCQPHRVLMCS*LPACYT
Trigger: TGTGTAGCAAGCAGGCAGGCAGGAGCACATTAGCAC...TCGATGGGGTTGACAGAGAAATCTTAAAATCTGACAGGGTAGAAGAAGCACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
3UTR-3UTR GCA 90 bp TGCCAAAGTGCTTCTTCTACCCTGTCAGATTTTAAGATTTCTCTGTCAACCCCATCTAATGTGCTAATGTaGTCCTGCCTGCCTGCTTGC +
Preference number: 2 (lower is better)
Translates to: CQSASSTLSDFKISLSTPSNVLM*SCLPAC
Trigger: GCAAGCAGGCAGGCAGGAGCACATTAGCACATTAGA...TGGGGTTGACAGAGAAATCTTAAAATCTGACAGGGTAGAAGAAGCACTTTGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
3UTR CAA 90 bp ATTTGCTCCATTCTCTCCACCTCTGAGTTGCATCAACACATGTCATaGTGTTCTGGGACTCTGAGCCTCTCTTATGAATCACAATGGCAA +
Preference number: 2 (lower is better)
Translates to: ICSILSTSELHQHMS*CSGTLSLSYESQWQ
Trigger: TTGCCATTGTGATTCATAAGAGAGGCTCAGAGTCCCAGAACACAATGACATGTGTTGATGCAACTCAGAGGTGGAGAGAATGGAGCAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371153.9
3UTR-3UTR GCA 90 bp AAAGTGCTTCTTCTACCCTGTCAGATTTTAAGATTTCTCTGTCAACCCCATCGATCCTGCCTGCCTGCTTaGTACACAATGTTACAGAGG +
Preference number: 2 (lower is better)
Translates to: KVLLLPCQILRFLCQPHRSCLPA*YTMLQR
Trigger: CCTCTGTAACATTGTGTAGCAAGCAGGCAGGCAGGA...TCGATGGGGTTGACAGAGAAATCTTAAAATCTGACAGGGTAGAAGAAGCACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
3UTR-3UTR GCA 90 bp AGTGCTTCTTCTACCCTGTCAGATTTTAAGATTTCTCTGTCAACCCCATCGAAAGTGCTCCTGCCTGCCTaGTTGCTACACAATGTTACA +
Preference number: 2 (lower is better)
Translates to: SASSTLSDFKISLSTPSKVLLPA*LLHNVT
Trigger: TGTAACATTGTGTAGCAAGCAGGCAGGCAGGAGCAC...TTTCGATGGGGTTGACAGAGAAATCTTAAAATCTGACAGGGTAGAAGAAGCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
3UTR-3UTR CCA 90 bp GAACAGATATTTGCTTCTAGGGGATATGAGGGGAAAGCACCGGGAATTACCATGAACAAAGCTCCCAAATaGTGCTTGTTCAGTTTCACC +
Preference number: 2 (lower is better)
Translates to: EQIFASRGYEGKAPGITMNKAPK*CLFSFT
Trigger: GGTGAAACTGAACAAGCACCATTTGGGAGCTTTGTT...CATGGTAATTCCCGGTGCTTTCCCCTCATATCCCCTAGAAGCAAATATCTGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317477.8
ENST00000371153.9
3UTR-3UTR GCA 90 bp CAAAGTGCTTCTTCTACCCTGTCAGATTTTAAGATTTCTCTGTCAACCCCATCGAAAGCTCCCAAATGGTaGTTGTTCAGTTTCACCAGT +
Preference number: 2 (lower is better)
Translates to: QSASSTLSDFKISLSTPSKAPKW*LFSFTS
Trigger: ACTGGTGAAACTGAACAAGCACCATTTGGGAGCTTT...CGATGGGGTTGACAGAGAAATCTTAAAATCTGACAGGGTAGAAGAAGCACTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
3UTR-3UTR GCA 90 bp AAAGTGCTTCTTCTACCCTGTCAGATTTTAAGATTTCTCTGTCAACCCCATCGAAAAGCTCCCAAATGGTaGTTGTTCAGTTTCACCAGT +
Preference number: 2 (lower is better)
Translates to: KVLLLPCQILRFLCQPHRKAPKW*LFSFTS
Trigger: ACTGGTGAAACTGAACAAGCACCATTTGGGAGCTTT...TCGATGGGGTTGACAGAGAAATCTTAAAATCTGACAGGGTAGAAGAAGCACTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
3UTR-3UTR CAA 90 bp GTATTGCTCTGCCCTGCCTGGGTCCCTTGCTCCTATTGCAGCCAGAAGTCCCAAGACGTACCCCTCACCTaGCACCTTGAACCCTGCTCT +
Preference number: 3 (lower is better)
Translates to: VLLCPAWVPCSYCSQKSQDVPLT*HLEPCS
Trigger: AGAGCAGGGTTCAAGGTGCAAGGTGAGGGGTACGTC...TTGGGACTTCTGGCTGCAATAGGAGCAAGGGACCCAGGCAGGGCAGAGCAATAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317477.8
ENST00000371153.9
3UTR GCA 72 bp GACACCGACGTACCCCTCACCTTGCACCTTGAACCCTaGTCTGAAGCCCGTGTAGTTTTCAGGCTTGGCCTA +
Preference number: 3 (lower is better)
Translates to: DTDVPLTLHLEP*SEARVVFRLGL
Trigger: TAGGCCAAGCCTGAAAACTACACGGGCTTCAGAGCAGGGTTCAAGGTGCAAGGTGAGGGGTACGTCGGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
3UTR CCA 72 bp GGTTGTGGCTCGATAGCATCAGCATCTCCCAGGACCTaGTTAGAAATGCAGAATCTCAGGCCCCACCCCAGA +
Preference number: 3 (lower is better)
Translates to: GCGSIASASPRT*LEMQNLRPHPR
Trigger: TCTGGGGTGGGGCCTGAGATTCTGCATTTCTAACCAGGTCCTGGGAGATGCTGATGCTATCGAGCCACAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371153.9
3UTR-3UTR CAA 90 bp GATGAAATTGCGGCCCAAGGAGGTTTCATGACTCACCACAGGGGCACCCAGCAACAGAGAAGAAGGCTTTaGTTCCCCACGGCCAGTTCT +
Preference number: 3 (lower is better)
Translates to: DEIAAQGGFMTHHRGTQQQRRRL*FPTASS
Trigger: AGAACTGGCCGTGGGGAACAAAAGCCTTCTTCTCTG...TTGCTGGGTGCCCCTGTGGTGAGTCATGAAACCTCCTTGGGCCGCAATTTCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317477.8
ENST00000371153.9
3UTR CCA 72 bp ATATGGAAGCTTCGGAAGGTATTGCTCTGCCCTGCCTaGGTCCCTTGCTCCTATTGCAGCCAGAAGTCCCAA +
Preference number: 3 (lower is better)
Translates to: IWKLRKVLLCPA*VPCSYCSQKSQ
Trigger: TTGGGACTTCTGGCTGCAATAGGAGCAAGGGACCCAGGCAGGGCAGAGCAATACCTTCCGAAGCTTCCATAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317477.8
ENST00000371153.9
3UTR-3UTR CAA 90 bp GAAACAAAGCTCCCAAATGGTGCTTGTTCAGTTTCACCAGTCTGCACGGTGATTGACGTACCCCTCACCTaGCACCTTGAACCCTGCTCT +
Preference number: 3 (lower is better)
Translates to: ETKLPNGACSVSPVCTVIDVPLT*HLEPCS
Trigger: AGAGCAGGGTTCAAGGTGCAAGGTGAGGGGTACGTC...AATCACCGTGCAGACTGGTGAAACTGAACAAGCACCATTTGGGAGCTTTGTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
3UTR TCA 72 bp CTAGGGGATATGAGGGGAAAGCACCGGGAATTACCATaGGGTAATGGATACGGCTATGCAGGTGGCTTCTTG +
Preference number: 3 (lower is better)
Translates to: LGDMRGKHRELP*GNGYGYAGGFL
Trigger: CAAGAAGCCACCTGCATAGCCGTATCCATTACCTCATGGTAATTCCCGGTGCTTTCCCCTCATATCCCCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317477.8
ENST00000371153.9
3UTR-3UTR CAA 90 bp TTCAGTTTCACCAGTCTGCACGGTGATTCTTCTAGGGTCCCCTACAGAATGCTTCTCCTGCCTGCCTGCTaGCTACACAATGTTACAGAG +
Preference number: 3 (lower is better)
Translates to: FSFTSLHGDSSRVPYRMLLLPAC*LHNVTE
Trigger: CTCTGTAACATTGTGTAGCAAGCAGGCAGGCAGGAG...AAGCATTCTGTAGGGGACCCTAGAAGAATCACCGTGCAGACTGGTGAAACTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
3UTR TCA 72 bp TTAGAGATGATGAAATTGCGGCCCAAGGAGGTTTCATaGCTCACCACAGGGGCACCCAGCAAATTGGCATCT +
Preference number: 3 (lower is better)
Translates to: LEMMKLRPKEVS*LTTGAPSKLAS
Trigger: AGATGCCAATTTGCTGGGTGCCCCTGTGGTGAGTCATGAAACCTCCTTGGGCCGCAATTTCATCATCTCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371153.9
3UTR GCA 72 bp AAGCTCCCAAATGGTGCTTGTTCAGTTTCACCAGTCTaGACGGTGATTCTTCTAGGGTCCCCTACAGAATGC +
Preference number: 3 (lower is better)
Translates to: KLPNGACSVSPV*TVILLGSPTEC
Trigger: GCATTCTGTAGGGGACCCTAGAAGAATCACCGTGCAGACTGGTGAAACTGAACAAGCACCATTTGGGAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
3UTR GCA 72 bp CTCGGCCACAAATTGGATTTTGAAACTTCCATCAGCTaGTTCTTGTGCAGCACCTCCCAGGAGGTAGGTTGT +
Preference number: 3 (lower is better)
Translates to: LGHKLDFETSIS*FLCSTSQEVGC
Trigger: ACAACCTACCTCCTGGGAGGTGCTGCACAAGAAGCAGCTGATGGAAGTTTCAAAATCCAATTTGTGGCCGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371153.9
3UTR-3UTR CAA 90 bp AACAAAGCTCCCAAATGGTGCTTGTTCAGTTTCACCAGTCTGCACGGTGATTCTCAGAGAAGAAGGCTTTaGTTCCCCACGGCCAGTTCT +
Preference number: 3 (lower is better)
Translates to: NKAPKWCLFSFTSLHGDSQRRRL*FPTASS
Trigger: AGAACTGGCCGTGGGGAACAAAAGCCTTCTTCTCTG...AGAATCACCGTGCAGACTGGTGAAACTGAACAAGCACCATTTGGGAGCTTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
3UTR-3UTR CAA 90 bp GAAACAAAGCTCCCAAATGGTGCTTGTTCAGTTTCACCAGTCTGCACGGTGATTCTCCTGCCTGCCTGCTaGCTACACAATGTTACAGAG +
Preference number: 3 (lower is better)
Translates to: ETKLPNGACSVSPVCTVILLPAC*LHNVTE
Trigger: CTCTGTAACATTGTGTAGCAAGCAGGCAGGCAGGAG...AATCACCGTGCAGACTGGTGAAACTGAACAAGCACCATTTGGGAGCTTTGTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
3UTR-3UTR CAA 90 bp GAACAGATATTTGCTTCTAGGGGATATGAGGGGAAAGCACCGGGAATTACCATGTCCCCTACAGAATGCTaGCCAGGGGGTTGGCTTAAA +
Preference number: 3 (lower is better)
Translates to: EQIFASRGYEGKAPGITMSPTEC*PGGWLK
Trigger: TTTAAGCCAACCCCCTGGCAAGCATTCTGTAGGGGA...CATGGTAATTCCCGGTGCTTTCCCCTCATATCCCCTAGAAGCAAATATCTGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000317477.8
ENST00000371153.9
3UTR-3UTR CAA 90 bp CAAAGTGCTTCTTCTACCCTGTCAGATTTTAAGATTTCTCTGTCAACCCCATCGCTCCTGCCTGCCTGCTaGCTACACAATGTTACAGAG +
Preference number: 3 (lower is better)
Translates to: QSASSTLSDFKISLSTPSLLPAC*LHNVTE
Trigger: CTCTGTAACATTGTGTAGCAAGCAGGCAGGCAGGAG...CGATGGGGTTGACAGAGAAATCTTAAAATCTGACAGGGTAGAAGAAGCACTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
3UTR CCA 72 bp TTTCTCTGTCAACCCCATCGAAACAAAGCTCCCAAATaGTGCTTGTTCAGTTTCACCAGTCTGCACGGTGAT +
Preference number: 3 (lower is better)
Translates to: FLCQPHRNKAPK*CLFSFTSLHGD
Trigger: ATCACCGTGCAGACTGGTGAAACTGAACAAGCACCATTTGGGAGCTTTGTTTCGATGGGGTTGACAGAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
3UTR-3UTR CAA 90 bp GAAACAAAGCTCCCAAATGGTGCTTGTTCAGTTTCACCAGTCTGCACGGTGATTAAGGCTGAAGATGTTTaGGATGTTTGGATGACACCG +
Preference number: 3 (lower is better)
Translates to: ETKLPNGACSVSPVCTVIKAEDV*DVWMTP
Trigger: CGGTGTCATCCAAACATCCAAAACATCTTCAGCCTT...AATCACCGTGCAGACTGGTGAAACTGAACAAGCACCATTTGGGAGCTTTGTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
3UTR-3UTR CAA 90 bp GCCAAAGTGCTTCTTCTACCCTGTCAGATTTTAAGATTTCTCTGTCAACCCCATAGATGTTTTGGATGTTaGGATGACACCGACGTACCC +
Preference number: 3 (lower is better)
Translates to: AKVLLLPCQILRFLCQPHRCFGC*DDTDVP
Trigger: GGGTACGTCGGTGTCATCCAAACATCCAAAACATCT...ATGGGGTTGACAGAGAAATCTTAAAATCTGACAGGGTAGAAGAAGCACTTTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
3UTR-3UTR CAA 90 bp AAGTATTGCTTTTCTAATGTGCTAATGTGCTCCTGCCTGCCTGCTTGCTACACAAAGGCTGAAGATGTTTaGGATGTTTGGATGACACCG +
Preference number: 3 (lower is better)
Translates to: KYCFSNVLMCSCLPACYTKAEDV*DVWMTP
Trigger: CGGTGTCATCCAAACATCCAAAACATCTTCAGCCTT...TGTGTAGCAAGCAGGCAGGCAGGAGCACATTAGCACATTAGAAAAGCAATACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
3UTR-3UTR CAA 90 bp AGTGCTTCTTCTACCCTGTCAGATTTTAAGATTTCTCTGTCAACCCCATCGAAAGCTCCCAAATGGTGCTaGTTCAGTTTCACCAGTCTG +
Preference number: 3 (lower is better)
Translates to: SASSTLSDFKISLSTPSKAPKWC*FSFTSL
Trigger: CAGACTGGTGAAACTGAACAAGCACCATTTGGGAGC...TTTCGATGGGGTTGACAGAGAAATCTTAAAATCTGACAGGGTAGAAGAAGCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
3UTR-3UTR CAA 90 bp GCCAAAGTGCTTCTTCTACCCTGTCAGATTTTAAGATTTCTCTGTCAACCCCATAAGGCTGAAGATGTTTaGGATGTTTGGATGACACCG +
Preference number: 3 (lower is better)
Translates to: AKVLLLPCQILRFLCQPHKAEDV*DVWMTP
Trigger: CGGTGTCATCCAAACATCCAAAACATCTTCAGCCTT...ATGGGGTTGACAGAGAAATCTTAAAATCTGACAGGGTAGAAGAAGCACTTTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
3UTR TCA 72 bp TGTTTCTTCCACAGACTCAAAATAGCTGAGAGAATCTaGCTCTGCCCAAATACATGTGGTGTGTGTCATTGG +
Preference number: 3 (lower is better)
Translates to: CFFHRLKIAERI*LCPNTCGVCHW
Trigger: CCAATGACACACACCACATGTATTTGGGCAGAGTCAGATTCTCTCAGCTATTTTGAGTCTGTGGAAGAAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317477.8
ENST00000371153.9
3UTR TCA 72 bp CATGTCATTGTGTTCTGGGACTCTGAGCCTCTCTTATaGATCACAATGGCAAAAGAAGTTTGCTGTACCATT +
Preference number: 3 (lower is better)
Translates to: HVIVFWDSEPLL*ITMAKEVCCTI
Trigger: AATGGTACAGCAAACTTCTTTTGCCATTGTGATTCATAAGAGAGGCTCAGAGTCCCAGAACACAATGACATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371153.9
3UTR TCA 72 bp AGTTGCATCAACACATGTCATTGTGTTCTGGGACTCTaGGCCTCTCTTATGAATCACAATGGCAAAAGAAGT +
Preference number: 3 (lower is better)
Translates to: SCINTCHCVLGL*ASLMNHNGKRS
Trigger: ACTTCTTTTGCCATTGTGATTCATAAGAGAGGCTCAGAGTCCCAGAACACAATGACATGTGTTGATGCAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371153.9
3UTR TCA 72 bp GAGCAGAATTATACAACAGGAATGTATGTGCATATTTaGCATAGTTTCTTCTCTAGAAGGGTGGCTCTCTGG +
Preference number: 3 (lower is better)
Translates to: EQNYTTGMYVHI*HSFFSRRVALW
Trigger: CCAGAGAGCCACCCTTCTAGAGAAGAAACTATGTCAAATATGCACATACATTCCTGTTGTATAATTCTGCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR GCA 90 bp CTTCAAGGGCGAGGGAGGAGTCCAGAGAAGAAGGCTTTTGTTCCCCACGGCCAGACAGCCCCAGGGACCTaGCCTGCTCCGCGTGGGCTC +
Preference number: 4 (lower is better)
Translates to: LQGRGRSPEKKAFVPHGQTAPGT*PAPRGL
Trigger: GAGCCCACGCGGAGCAGGGCAGGTCCCTGGGGCTGT...CTGGCCGTGGGGAACAAAAGCCTTCTTCTCTGGACTCCTCCCTCGCCCTTGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CCA 90 bp TGCCCTCTTCAAGGGCGAGGGAGGAGTCCAGAGAAGAAGGCTTTTGTTCCCCACCCTCCAGGCGCCCTCTaGCCGACGGTCTCGGCCCTG +
Preference number: 4 (lower is better)
Translates to: CPLQGRGRSPEKKAFVPHPPGAL*PTVSAL
Trigger: CAGGGCCGAGACCGTCGGCCAGAGGGCGCCTGGAGG...GTGGGGAACAAAAGCCTTCTTCTCTGGACTCCTCCCTCGCCCTTGAAGAGGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS-3UTR CCA 90 bp TGGCCTGTGACCTCTGCCCTCTTCAAGGGCGAGGGAGGAGTCCAGAGAAGAAGGCCAGGCCCACTTTCCTaGGCAGCATGGCAGGTGCCC +
Preference number: 4 (lower is better)
Translates to: WPVTSALFKGEGGVQRRRPGPLS*AAWQVP
Trigger: GGGCACCTGCCATGCTGCCCAGGAAAGTGGGCCTGG...CCTTCTTCTCTGGACTCCTCCCTCGCCCTTGAAGAGGGCAGAGGTCACAGGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CCA 90 bp TGGCCTGTGACCTCTGCCCTCTTCAAGGGCGAGGGAGGAGTCCAGAGAAGAAGGTGGGGAGATCTCCACTaGCGGGGAGGAGGAGGAGGC +
Preference number: 4 (lower is better)
Translates to: WPVTSALFKGEGGVQRRRWGDLH*RGGGGG
Trigger: GCCTCCTCCTCCTCCCCGCCAGTGGAGATCTCCCCA...CCTTCTTCTCTGGACTCCTCCCTCGCCCTTGAAGAGGGCAGAGGTCACAGGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS-3UTR TCA 90 bp TGGATGACACCGACGTACCCCTCACCTTGCACCTTGAACCCTGCTCTGAAGCCCCCTCCCTGTCGTGGCTaGCTCCCAGCATCAGCGCAG +
Preference number: 4 (lower is better)
Translates to: WMTPTYPSPCTLNPALKPPPCRG*LPASAQ
Trigger: CTGCGCTGATGCTGGGAGTCAGCCACGACAGGGAGG...GGGCTTCAGAGCAGGGTTCAAGGTGCAAGGTGAGGGGTACGTCGGTGTCATCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR TCA 90 bp TGGCCTGTGACCTCTGCCCTCTTCAAGGGCGAGGGAGGAGTCCAGAGAAGAAGGGGTGACAGGCCACCATaGGGGCCGAGGATCCATCGT +
Preference number: 4 (lower is better)
Translates to: WPVTSALFKGEGGVQRRRGDRPP*GPRIHR
Trigger: ACGATGGATCCTCGGCCCTCATGGTGGCCTGTCACC...CCTTCTTCTCTGGACTCCTCCCTCGCCCTTGAAGAGGGCAGAGGTCACAGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR TCA 90 bp TGGCCTGTGACCTCTGCCCTCTTCAAGGGCGAGGGAGGAGTCCAGAGAAGAAGGTCCACGTTGCCATGGTaGCAGGCCACCATGAGGGCC +
Preference number: 4 (lower is better)
Translates to: WPVTSALFKGEGGVQRRRSTLPW*QATMRA
Trigger: GGCCCTCATGGTGGCCTGTCACCATGGCAACGTGGA...CCTTCTTCTCTGGACTCCTCCCTCGCCCTTGAAGAGGGCAGAGGTCACAGGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR TCA 90 bp TGCCCTCTTCAAGGGCGAGGGAGGAGTCCAGAGAAGAAGGCTTTTGTTCCCCACTGGAGGCTGGCTGCTTaGTGGCGCTGGCCAGCTCCG +
Preference number: 4 (lower is better)
Translates to: CPLQGRGRSPEKKAFVPHWRLAA*WRWPAP
Trigger: CGGAGCTGGCCAGCGCCATCAAGCAGCCAGCCTCCA...GTGGGGAACAAAAGCCTTCTTCTCTGGACTCCTCCCTCGCCCTTGAAGAGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS-3UTR GCA 90 bp CTGCCCTCTTCAAGGGCGAGGGAGGAGTCCAGAGAAGAAGGCTTTTGTTCCCCAGTCGCAGGCTGGGTGTaGCAGGAGCAGCCGCACCAG +
Preference number: 4 (lower is better)
Translates to: LPSSRAREESREEGFCSPVAGWV*QEQPHQ
Trigger: CTGGTGCGGCTGCTCCTGGCACACCCAGCCTGCGAC...TGGGGAACAAAAGCCTTCTTCTCTGGACTCCTCCCTCGCCCTTGAAGAGGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR GCA 90 bp GACACCGACGTACCCCTCACCTTGCACCTTGAACCCTGCTCTGAAGCCCGTGTACCCTCAGGGATGCCCTaGCCAGCCTCGCAGGTGAGA +
Preference number: 4 (lower is better)
Translates to: DTDVPLTLHLEPCSEARVPSGMP*PASQVR
Trigger: TCTCACCTGCGAGGCTGGGCAGGGCATCCCTGAGGG...TACACGGGCTTCAGAGCAGGGTTCAAGGTGCAAGGTGAGGGGTACGTCGGTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR GCA 90 bp CTGCCCTCTTCAAGGGCGAGGGAGGAGTCCAGAGAAGAAGGCTTTTGTTCCCCAAGGTGCCCTCAGGGATaGCCTGCCCAGCCTCGCAGG +
Preference number: 4 (lower is better)
Translates to: LPSSRAREESREEGFCSPRCPQG*PAQPRR
Trigger: CCTGCGAGGCTGGGCAGGGCATCCCTGAGGGCACCT...TGGGGAACAAAAGCCTTCTTCTCTGGACTCCTCCCTCGCCCTTGAAGAGGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR GCA 90 bp ACCAGTCTGCACGGTGATTCTTCTAGGGTCCCCTACAGAATGCTTGCCAGGGGGAGGTGCCCTCAGGGATaGCCTGCCCAGCCTCGCAGG +
Preference number: 4 (lower is better)
Translates to: TSLHGDSSRVPYRMLARGRCPQG*PAQPRR
Trigger: CCTGCGAGGCTGGGCAGGGCATCCCTGAGGGCACCT...CCCCCTGGCAAGCATTCTGTAGGGGACCCTAGAAGAATCACCGTGCAGACTGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR GCA 90 bp GGAGGAGTCCAGAGAAGAAGGCTTTTGTTCCCCACGGCCAGTTCTTCTGCAGCCGGGCAGCATGGCAGGTaGCCTCAGGGATGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: GGVQRRRLLFPTASSSAAGQHGR*PQGCPA
Trigger: GGCAGGGCATCCCTGAGGGCACCTGCCATGCTGCCC...GGCTGCAGAAGAACTGGCCGTGGGGAACAAAAGCCTTCTTCTCTGGACTCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CCA 90 bp CTGCCCTCTTCAAGGGCGAGGGAGGAGTCCAGAGAAGAAGGCTTTTGTTCCCCAGCTGCTGTCGCAGGCTaGGTGTGCCAGGAGCAGCCG +
Preference number: 4 (lower is better)
Translates to: LPSSRAREESREEGFCSPAAVAG*VCQEQP
Trigger: CGGCTGCTCCTGGCACACCCAGCCTGCGACAGCAGC...TGGGGAACAAAAGCCTTCTTCTCTGGACTCCTCCCTCGCCCTTGAAGAGGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CCA 90 bp TGCCCTCTTCAAGGGCGAGGGAGGAGTCCAGAGAAGAAGGCTTTTGTTCCCCACGCTGCTGTCGCAGGCTaGGTGTGCCAGGAGCAGCCG +
Preference number: 4 (lower is better)
Translates to: CPLQGRGRSPEKKAFVPHAAVAG*VCQEQP
Trigger: CGGCTGCTCCTGGCACACCCAGCCTGCGACAGCAGC...GTGGGGAACAAAAGCCTTCTTCTCTGGACTCCTCCCTCGCCCTTGAAGAGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR TCA 90 bp TGGATGACACCGACGTACCCCTCACCTTGCACCTTGAACCCTGCTCTGAAGCCCTCCACGTTGCCATGGTaGCAGGCCACCATGAGGGCC +
Preference number: 4 (lower is better)
Translates to: WMTPTYPSPCTLNPALKPSTLPW*QATMRA
Trigger: GGCCCTCATGGTGGCCTGTCACCATGGCAACGTGGA...GGGCTTCAGAGCAGGGTTCAAGGTGCAAGGTGAGGGGTACGTCGGTGTCATCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR TCA 90 bp CTGCCCTCTTCAAGGGCGAGGGAGGAGTCCAGAGAAGAAGGCTTTTGTTCCCCACCGACAGCAGCAGGTTaGGGGAGCTCAGCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: LPSSRAREESREEGFCSPPTAAG*GSSAAG
Trigger: GCCAGCTGCTGAGCTCCCTCAACCTGCTGCTGTCGG...TGGGGAACAAAAGCCTTCTTCTCTGGACTCCTCCCTCGCCCTTGAAGAGGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS-3UTR GCA 90 bp TGGCCTGTGACCTCTGCCCTCTTCAAGGGCGAGGGAGGAGTCCAGAGAAGAAGGGCACCAGGTCCACGTTaGCATGGTGACAGGCCACCA +
Preference number: 4 (lower is better)
Translates to: WPVTSALFKGEGGVQRRRAPGPR*HGDRPP
Trigger: TGGTGGCCTGTCACCATGGCAACGTGGACCTGGTGC...CCTTCTTCTCTGGACTCCTCCCTCGCCCTTGAAGAGGGCAGAGGTCACAGGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR GCA 90 bp GACACCGACGTACCCCTCACCTTGCACCTTGAACCCTGCTCTGAAGCCCGTGTACACGGCCAGTTCTTCTaGAGCCCCTACAGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: DTDVPLTLHLEPCSEARVHGQFF*SPYSPR
Trigger: CCTGGGGCTGTAGGGGCTGCAGAAGAACTGGCCGTG...TACACGGGCTTCAGAGCAGGGTTCAAGGTGCAAGGTGAGGGGTACGTCGGTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR GCA 90 bp CTGCCCTCTTCAAGGGCGAGGGAGGAGTCCAGAGAAGAAGGCTTTTGTTCCCCACCCTCAGGGATGCCCTaGCCAGCCTCGCAGGTGAGA +
Preference number: 4 (lower is better)
Translates to: LPSSRAREESREEGFCSPPSGMP*PASQVR
Trigger: TCTCACCTGCGAGGCTGGGCAGGGCATCCCTGAGGG...TGGGGAACAAAAGCCTTCTTCTCTGGACTCCTCCCTCGCCCTTGAAGAGGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CCA 90 bp ACCAGTCTGCACGGTGATTCTTCTAGGGTCCCCTACAGAATGCTTGCCAGGGGGCTGCCCTGCTCCGCGTaGGCTCTCAGAAGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: TSLHGDSSRVPYRMLARGLPCSA*ALRSPA
Trigger: TGCTGGGCTTCTGAGAGCCCACGCGGAGCAGGGCAG...CCCCCTGGCAAGCATTCTGTAGGGGACCCTAGAAGAATCACCGTGCAGACTGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CCA 90 bp TTCAAGGGCGAGGGAGGAGTCCAGAGAAGAAGGCTTTTGTTCCCCACGGCCAGTCTGCCCTGCTCCGCGTaGGCTCTCAGAAGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: FKGEGGVQRRRLLFPTASLPCSA*ALRSPA
Trigger: TGCTGGGCTTCTGAGAGCCCACGCGGAGCAGGGCAG...ACTGGCCGTGGGGAACAAAAGCCTTCTTCTCTGGACTCCTCCCTCGCCCTTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CCA 90 bp TGGAAGCTTCGGAAGGTATTGCTCTGCCCTGCCTGGGTCCCTTGCTCCTATTGCCTGCCCTGCTCCGCGTaGGCTCTCAGAAGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: WKLRKVLLCPAWVPCSYCLPCSA*ALRSPA
Trigger: TGCTGGGCTTCTGAGAGCCCACGCGGAGCAGGGCAG...GCAATAGGAGCAAGGGACCCAGGCAGGGCAGAGCAATACCTTCCGAAGCTTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317477.8
ENST00000371153.9
CDS-3UTR CCA 90 bp TGGAAGCTTCGGAAGGTATTGCTCTGCCCTGCCTGGGTCCCTTGCTCCTATTGCCCAGGCCCACTTTCCTaGGCAGCATGGCAGGTGCCC +
Preference number: 4 (lower is better)
Translates to: WKLRKVLLCPAWVPCSYCPGPLS*AAWQVP
Trigger: GGGCACCTGCCATGCTGCCCAGGAAAGTGGGCCTGG...GCAATAGGAGCAAGGGACCCAGGCAGGGCAGAGCAATACCTTCCGAAGCTTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS-3UTR CCA 90 bp TGGATGACACCGACGTACCCCTCACCTTGCACCTTGAACCCTGCTCTGAAGCCCCTCTCGGCCTTGGAGTaGGGGACTTCTTCCCCAGGC +
Preference number: 4 (lower is better)
Translates to: WMTPTYPSPCTLNPALKPLSALE*GTSSPG
Trigger: GCCTGGGGAAGAAGTCCCCCACTCCAAGGCCGAGAG...GGGCTTCAGAGCAGGGTTCAAGGTGCAAGGTGAGGGGTACGTCGGTGTCATCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CCA 90 bp TGGCCTGTGACCTCTGCCCTCTTCAAGGGCGAGGGAGGAGTCCAGAGAAGAAGGAGGGAGCTCAGCAGCTaGCTCTGGATGCTGCTGAGC +
Preference number: 4 (lower is better)
Translates to: WPVTSALFKGEGGVQRRRRELSS*LWMLLS
Trigger: GCTCAGCAGCATCCAGAGCCAGCTGCTGAGCTCCCT...CCTTCTTCTCTGGACTCCTCCCTCGCCCTTGAAGAGGGCAGAGGTCACAGGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS-3UTR TCA 90 bp GGAGGAGTCCAGAGAAGAAGGCTTTTGTTCCCCACGGCCAGTTCTTCTGCAGCCAGGAAGTGTGGGGAGTaGGGCTGGACCTCGTGGAGG +
Preference number: 4 (lower is better)
Translates to: GGVQRRRLLFPTASSSAARKCGE*GWTSWR
Trigger: CCTCCACGAGGTCCAGCCTCACTCCCCACACTTCCT...GGCTGCAGAAGAACTGGCCGTGGGGAACAAAAGCCTTCTTCTCTGGACTCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR TCA 90 bp TTCAAGGGCGAGGGAGGAGTCCAGAGAAGAAGGCTTTTGTTCCCCACGGCCAGTAGGAAGTGTGGGGAGTaGGGCTGGACCTCGTGGAGG +
Preference number: 4 (lower is better)
Translates to: FKGEGGVQRRRLLFPTASRKCGE*GWTSWR
Trigger: CCTCCACGAGGTCCAGCCTCACTCCCCACACTTCCT...ACTGGCCGTGGGGAACAAAAGCCTTCTTCTCTGGACTCCTCCCTCGCCCTTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR TCA 90 bp CCCCTCACCTTGCACCTTGAACCCTGCTCTGAAGCCCGTGTAGTTTTCAGGCTTCCTCCCTGTCGTGGCTaGCTCCCAGCATCAGCGCAG +
Preference number: 4 (lower is better)
Translates to: PLTLHLEPCSEARVVFRLPPCRG*LPASAQ
Trigger: CTGCGCTGATGCTGGGAGTCAGCCACGACAGGGAGG...AAGCCTGAAAACTACACGGGCTTCAGAGCAGGGTTCAAGGTGCAAGGTGAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR TCA 90 bp TGCCCTCTTCAAGGGCGAGGGAGGAGTCCAGAGAAGAAGGCTTTTGTTCCCCACGGTGACAGGCCACCATaGGGGCCGAGGATCCATCGT +
Preference number: 4 (lower is better)
Translates to: CPLQGRGRSPEKKAFVPHGDRPP*GPRIHR
Trigger: ACGATGGATCCTCGGCCCTCATGGTGGCCTGTCACC...GTGGGGAACAAAAGCCTTCTTCTCTGGACTCCTCCCTCGCCCTTGAAGAGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR TCA 90 bp CTGCCCTCTTCAAGGGCGAGGGAGGAGTCCAGAGAAGAAGGCTTTTGTTCCCCATCCACGTTGCCATGGTaGCAGGCCACCATGAGGGCC +
Preference number: 4 (lower is better)
Translates to: LPSSRAREESREEGFCSPSTLPW*QATMRA
Trigger: GGCCCTCATGGTGGCCTGTCACCATGGCAACGTGGA...TGGGGAACAAAAGCCTTCTTCTCTGGACTCCTCCCTCGCCCTTGAAGAGGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR TCA 90 bp TGGCCTGTGACCTCTGCCCTCTTCAAGGGCGAGGGAGGAGTCCAGAGAAGAAGGGTCCACTCCCAAAAGTaGGCTCGGCATCCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: WPVTSALFKGEGGVQRRRVHSQK*ARHPLA
Trigger: AGCCAGAGGATGCCGAGCTCACTTTTGGGAGTGGAC...CCTTCTTCTCTGGACTCCTCCCTCGCCCTTGAAGAGGGCAGAGGTCACAGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS-3UTR GCA 90 bp TGGATGACACCGACGTACCCCTCACCTTGCACCTTGAACCCTGCTCTGAAGCCCGCACCAGGTCCACGTTaGCATGGTGACAGGCCACCA +
Preference number: 4 (lower is better)
Translates to: WMTPTYPSPCTLNPALKPAPGPR*HGDRPP
Trigger: TGGTGGCCTGTCACCATGGCAACGTGGACCTGGTGC...GGGCTTCAGAGCAGGGTTCAAGGTGCAAGGTGAGGGGTACGTCGGTGTCATCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR GCA 90 bp TGGATGACACCGACGTACCCCTCACCTTGCACCTTGAACCCTGCTCTGAAGCCCCCTTGTCAGTCAGGCTaGTGTCGCAGGCTGGGTGTG +
Preference number: 4 (lower is better)
Translates to: WMTPTYPSPCTLNPALKPPCQSG*CRRLGV
Trigger: CACACCCAGCCTGCGACAGCAGCCTGACTGACAAGG...GGGCTTCAGAGCAGGGTTCAAGGTGCAAGGTGAGGGGTACGTCGGTGTCATCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR GCA 90 bp CCAGTCTGCACGGTGATTCTTCTAGGGTCCCCTACAGAATGCTTGCCAGGGGGTCACGGCCAGTTCTTCTaGAGCCCCTACAGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: PVCTVILLGSPTECLPGGHGQFF*SPYSPR
Trigger: CCTGGGGCTGTAGGGGCTGCAGAAGAACTGGCCGTG...ACCCCCTGGCAAGCATTCTGTAGGGGACCCTAGAAGAATCACCGTGCAGACTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR GCA 90 bp GGAGGAGTCCAGAGAAGAAGGCTTTTGTTCCCCACGGCCAGTTCTTCTGCAGCCCTGGCCTGTGACCTCTaGCCTCTTCAAGGGCGAGGG +
Preference number: 4 (lower is better)
Translates to: GGVQRRRLLFPTASSSAALACDL*PLQGRG
Trigger: CCCTCGCCCTTGAAGAGGGCAGAGGTCACAGGCCAG...GGCTGCAGAAGAACTGGCCGTGGGGAACAAAAGCCTTCTTCTCTGGACTCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR GCA 90 bp TTCAAGGGCGAGGGAGGAGTCCAGAGAAGAAGGCTTTTGTTCCCCACGGCCAGTCTGGCCTGTGACCTCTaGCCTCTTCAAGGGCGAGGG +
Preference number: 4 (lower is better)
Translates to: FKGEGGVQRRRLLFPTASLACDL*PLQGRG
Trigger: CCCTCGCCCTTGAAGAGGGCAGAGGTCACAGGCCAG...ACTGGCCGTGGGGAACAAAAGCCTTCTTCTCTGGACTCCTCCCTCGCCCTTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR GCA 90 bp TTTGGATGTTTGGATGACACCGACGTACCCCTCACCTTGCACCTTGAACCCTGCGGGCAGCATGGCAGGTaGCCTCAGGGATGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: FGCLDDTDVPLTLHLEPCGQHGR*PQGCPA
Trigger: GGCAGGGCATCCCTGAGGGCACCTGCCATGCTGCCC...GCAGGGTTCAAGGTGCAAGGTGAGGGGTACGTCGGTGTCATCCAAACATCCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR GCA 90 bp TTCAAGGGCGAGGGAGGAGTCCAGAGAAGAAGGCTTTTGTTCCCCACGGCCAGTGGCAGGCATGCTGGATaGTCTCAAGAGCTGGGGCCG +
Preference number: 4 (lower is better)
Translates to: FKGEGGVQRRRLLFPTASGRHAG*SQELGP
Trigger: CGGCCCCAGCTCTTGAGAGCATCCAGCATGCCTGCC...ACTGGCCGTGGGGAACAAAAGCCTTCTTCTCTGGACTCCTCCCTCGCCCTTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS-3UTR GCA 90 bp GACACCGACGTACCCCTCACCTTGCACCTTGAACCCTGCTCTGAAGCCCGTGTATCCAGGCAGTTCCACTaGTCCTGCAGGAGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: DTDVPLTLHLEPCSEARVSRQFH*SCRSSW
Trigger: CCAGGAGCTCCTGCAGGAGCAGTGGAACTGCCTGGA...TACACGGGCTTCAGAGCAGGGTTCAAGGTGCAAGGTGAGGGGTACGTCGGTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS-3UTR CCA 90 bp CCAGTCTGCACGGTGATTCTTCTAGGGTCCCCTACAGAATGCTTGCCAGGGGGTCTCTCGGCCTTGGAGTaGGGGACTTCTTCCCCAGGC +
Preference number: 4 (lower is better)
Translates to: PVCTVILLGSPTECLPGGLSALE*GTSSPG
Trigger: GCCTGGGGAAGAAGTCCCCCACTCCAAGGCCGAGAG...ACCCCCTGGCAAGCATTCTGTAGGGGACCCTAGAAGAATCACCGTGCAGACTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CCA 90 bp GTATTGCTCTGCCCTGCCTGGGTCCCTTGCTCCTATTGCAGCCAGAAGTCCCAAGCTGGAGATGCTGCCTaGATCCACCCTGGCAAGGCC +
Preference number: 4 (lower is better)
Translates to: VLLCPAWVPCSYCSQKSQAGDAA*IHPGKA
Trigger: GGCCTTGCCAGGGTGGATCCAGGCAGCATCTCCAGC...TTGGGACTTCTGGCTGCAATAGGAGCAAGGGACCCAGGCAGGGCAGAGCAATAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS-3UTR CCA 90 bp TTCAAGGGCGAGGGAGGAGTCCAGAGAAGAAGGCTTTTGTTCCCCACGGCCAGTATCCGTTGGCGAGCTTaGTGGCCTTCCCGGGTGCTC +
Preference number: 4 (lower is better)
Translates to: FKGEGGVQRRRLLFPTASIRWRA*WPSRVL
Trigger: GAGCACCCGGGAAGGCCACCAAGCTCGCCAACGGAT...ACTGGCCGTGGGGAACAAAAGCCTTCTTCTCTGGACTCCTCCCTCGCCCTTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS-3UTR CCA 90 bp GGAGGAGTCCAGAGAAGAAGGCTTTTGTTCCCCACGGCCAGTTCTTCTGCAGCCGCTGAGCTTGGAGGCTaGCTGCTTGATGGCGCTGGC +
Preference number: 4 (lower is better)
Translates to: GGVQRRRLLFPTASSSAAAELGG*LLDGAG
Trigger: GCCAGCGCCATCAAGCAGCCAGCCTCCAAGCTCAGC...GGCTGCAGAAGAACTGGCCGTGGGGAACAAAAGCCTTCTTCTCTGGACTCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS-3UTR TCA 90 bp CCCCTCACCTTGCACCTTGAACCCTGCTCTGAAGCCCGTGTAGTTTTCAGGCTTAGGAAGTGTGGGGAGTaGGGCTGGACCTCGTGGAGG +
Preference number: 4 (lower is better)
Translates to: PLTLHLEPCSEARVVFRLRKCGE*GWTSWR
Trigger: CCTCCACGAGGTCCAGCCTCACTCCCCACACTTCCT...AAGCCTGAAAACTACACGGGCTTCAGAGCAGGGTTCAAGGTGCAAGGTGAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR TCA 90 bp GACACCGACGTACCCCTCACCTTGCACCTTGAACCCTGCTCTGAAGCCCGTGTACAGCTAAGCAGCGCTTaGACCATGTCCTCCCTGTCG +
Preference number: 4 (lower is better)
Translates to: DTDVPLTLHLEPCSEARVQLSSA*TMSSLS
Trigger: CGACAGGGAGGACATGGTTCAAGCGCTGCTTAGCTG...TACACGGGCTTCAGAGCAGGGTTCAAGGTGCAAGGTGAGGGGTACGTCGGTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR TCA 90 bp TTGCTCTGCCCTGCCTGGGTCCCTTGCTCCTATTGCAGCCAGAAGTCCCAAAAAGGTGACAGGCCACCATaGGGGCCGAGGATCCATCGT +
Preference number: 4 (lower is better)
Translates to: LLCPAWVPCSYCSQKSQKGDRPP*GPRIHR
Trigger: ACGATGGATCCTCGGCCCTCATGGTGGCCTGTCACC...TTTTTGGGACTTCTGGCTGCAATAGGAGCAAGGGACCCAGGCAGGGCAGAGCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317477.8
ENST00000371153.9
CDS-3UTR TCA 90 bp TTGCTCTGCCCTGCCTGGGTCCCTTGCTCCTATTGCAGCCAGAAGTCCCAAAAAACACTGCCTTCACCCTaGAGGGGAGGGAGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: LLCPAWVPCSYCSQKSQKTLPSP*RGGRAG
Trigger: TCCTGCCCTCCCTCCCCTTCAGGGTGAAGGCAGTGT...TTTTTGGGACTTCTGGCTGCAATAGGAGCAAGGGACCCAGGCAGGGCAGAGCAA
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS-3UTR GCA 90 bp GGAGGAGTCCAGAGAAGAAGGCTTTTGTTCCCCACGGCCAGTTCTTCTGCAGCCGCACCAGGTCCACGTTaGCATGGTGACAGGCCACCA +
Preference number: 4 (lower is better)
Translates to: GGVQRRRLLFPTASSSAAAPGPR*HGDRPP
Trigger: TGGTGGCCTGTCACCATGGCAACGTGGACCTGGTGC...GGCTGCAGAAGAACTGGCCGTGGGGAACAAAAGCCTTCTTCTCTGGACTCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR GCA 90 bp GATGAAATTGCGGCCCAAGGAGGTTTCATGACTCACCACAGGGGCACCCAGCAAAGGTTCTTGGCGAGCTaGGGAAGTCCTGCGCGAGGC +
Preference number: 4 (lower is better)
Translates to: DEIAAQGGFMTHHRGTQQRFLAS*GSPARG
Trigger: GCCTCGCGCAGGACTTCCGCAGCTCGCCAAGAACCT...TTGCTGGGTGCCCCTGTGGTGAGTCATGAAACCTCCTTGGGCCGCAATTTCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS-3UTR GCA 90 bp TGGATGACACCGACGTACCCCTCACCTTGCACCTTGAACCCTGCTCTGAAGCCCACAAGTCCTCTGGGGTaGTGTCCTCACCGCTGGTCT +
Preference number: 4 (lower is better)
Translates to: WMTPTYPSPCTLNPALKPTSPLG*CPHRWS
Trigger: AGACCAGCGGTGAGGACAGCACCCCAGAGGACTTGT...GGGCTTCAGAGCAGGGTTCAAGGTGCAAGGTGAGGGGTACGTCGGTGTCATCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CCA 90 bp CTGCCCTCTTCAAGGGCGAGGGAGGAGTCCAGAGAAGAAGGCTTTTGTTCCCCACTTTCCTGGGCAGCATaGCAGGTGCCCTCAGGGATG +
Preference number: 4 (lower is better)
Translates to: LPSSRAREESREEGFCSPLSWAA*QVPSGM
Trigger: CATCCCTGAGGGCACCTGCCATGCTGCCCAGGAAAG...TGGGGAACAAAAGCCTTCTTCTCTGGACTCCTCCCTCGCCCTTGAAGAGGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CCA 90 bp CTTCAAGGGCGAGGGAGGAGTCCAGAGAAGAAGGCTTTTGTTCCCCACGGCCAGGTTTCTGGCAGATGCTaGCTCAGTGCCCGGCATGCA +
Preference number: 4 (lower is better)
Translates to: LQGRGRSPEKKAFVPHGQVSGRC*LSARHA
Trigger: TGCATGCCGGGCACTGAGCCAGCATCTGCCAGAAAC...CTGGCCGTGGGGAACAAAAGCCTTCTTCTCTGGACTCCTCCCTCGCCCTTGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CCA 90 bp GACACCGACGTACCCCTCACCTTGCACCTTGAACCCTGCTCTGAAGCCCGTGTACTGCTTGTTGAGGCCTaGGGGGCATTACCAAGCGGT +
Preference number: 4 (lower is better)
Translates to: DTDVPLTLHLEPCSEARVLLVEA*GALPSG
Trigger: ACCGCTTGGTAATGCCCCCCAGGCCTCAACAAGCAG...TACACGGGCTTCAGAGCAGGGTTCAAGGTGCAAGGTGAGGGGTACGTCGGTGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS-3UTR CCA 90 bp TGGCCTGTGACCTCTGCCCTCTTCAAGGGCGAGGGAGGAGTCCAGAGAAGAAGGAATAGTGGCATCCGTTaGCGAGCTTGGTGGCCTTCC +
Preference number: 4 (lower is better)
Translates to: WPVTSALFKGEGGVQRRRNSGIR*RAWWPS
Trigger: GGAAGGCCACCAAGCTCGCCAACGGATGCCACTATT...CCTTCTTCTCTGGACTCCTCCCTCGCCCTTGAAGAGGGCAGAGGTCACAGGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS-3UTR CCA 90 bp TGGCCTGTGACCTCTGCCCTCTTCAAGGGCGAGGGAGGAGTCCAGAGAAGAAGGAGGCCTCTGGACTCATaGTCTAGCACCCACTTCTGC +
Preference number: 4 (lower is better)
Translates to: WPVTSALFKGEGGVQRRRRPLDS*SSTHFC
Trigger: GCAGAAGTGGGTGCTAGACCATGAGTCCAGAGGCCT...CCTTCTTCTCTGGACTCCTCCCTCGCCCTTGAAGAGGGCAGAGGTCACAGGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371150.5
CDS-3UTR TCA 90 bp GGAGGAGTCCAGAGAAGAAGGCTTTTGTTCCCCACGGCCAGTTCTTCTGCAGCCGCCGTGTTCCCGTTGTaGTCGGCCAAGTTGACAAGC +
Preference number: 4 (lower is better)
Translates to: GGVQRRRLLFPTASSSAAAVFPL*SAKLTS
Trigger: GCTTGTCAACTTGGCCGATCACAACGGGAACACGGC...GGCTGCAGAAGAACTGGCCGTGGGGAACAAAAGCCTTCTTCTCTGGACTCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR TCA 90 bp TTCAAGGGCGAGGGAGGAGTCCAGAGAAGAAGGCTTTTGTTCCCCACGGCCAGTCAGCTAAGCAGCGCTTaGACCATGTCCTCCCTGTCG +
Preference number: 4 (lower is better)
Translates to: FKGEGGVQRRRLLFPTASQLSSA*TMSSLS
Trigger: CGACAGGGAGGACATGGTTCAAGCGCTGCTTAGCTG...ACTGGCCGTGGGGAACAAAAGCCTTCTTCTCTGGACTCCTCCCTCGCCCTTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR TCA 90 bp TTGCTCTGCCCTGCCTGGGTCCCTTGCTCCTATTGCAGCCAGAAGTCCCAAAAACTCCTGTGTCCCAAGTaGTGCCTCCCTTGGCACCAC +
Preference number: 4 (lower is better)
Translates to: LLCPAWVPCSYCSQKSQKLLCPK*CLPWHH
Trigger: GTGGTGCCAAGGGAGGCATCACTTGGGACACAGGAG...TTTTTGGGACTTCTGGCTGCAATAGGAGCAAGGGACCCAGGCAGGGCAGAGCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS-3UTR GCA 90 bp GACACCGACGTACCCCTCACCTTGCACCTTGAACCCTGCTCTGAAGCCCGTGTACTGCAGATTGACATCTaGCTGGCAGCTAAGCAGCGC +
Preference number: 4 (lower is better)
Translates to: DTDVPLTLHLEPCSEARVLQIDI*LAAKQR
Trigger: GCGCTGCTTAGCTGCCAGGCAGATGTCAATCTGCAG...TACACGGGCTTCAGAGCAGGGTTCAAGGTGCAAGGTGAGGGGTACGTCGGTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR GCA 90 bp CCCCTCACCTTGCACCTTGAACCCTGCTCTGAAGCCCGTGTAGTTTTCAGGCTTGCACCAGGTCCACGTTaGCATGGTGACAGGCCACCA +
Preference number: 4 (lower is better)
Translates to: PLTLHLEPCSEARVVFRLAPGPR*HGDRPP
Trigger: TGGTGGCCTGTCACCATGGCAACGTGGACCTGGTGC...AAGCCTGAAAACTACACGGGCTTCAGAGCAGGGTTCAAGGTGCAAGGTGAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR GCA 90 bp GCTCCCAAATGGTGCTTGTTCAGTTTCACCAGTCTGCACGGTGATTCTTCTAGGGTCGCAGGCTGGGTGTaGCAGGAGCAGCCGCACCAG +
Preference number: 4 (lower is better)
Translates to: APKWCLFSFTSLHGDSSRVAGWV*QEQPHQ
Trigger: CTGGTGCGGCTGCTCCTGGCACACCCAGCCTGCGAC...CCTAGAAGAATCACCGTGCAGACTGGTGAAACTGAACAAGCACCATTTGGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR GCA 90 bp CTGCCCTCTTCAAGGGCGAGGGAGGAGTCCAGAGAAGAAGGCTTTTGTTCCCCAGGGTCCCCTACAGAATaGTTGCCAGGGGGTTGGCTT +
Preference number: 4 (lower is better)
Translates to: LPSSRAREESREEGFCSPGSPTE*LPGGWL
Trigger: AAGCCAACCCCCTGGCAAGCATTCTGTAGGGGACCC...TGGGGAACAAAAGCCTTCTTCTCTGGACTCCTCCCTCGCCCTTGAAGAGGGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR GCA 90 bp TGTGCTGGCCCCAGGGAATATGGAAGCTTCGGAAGGTATTGCTCTGCCCTGCCTGGGTCCCCTACAGAATaGTTGCCAGGGGGTTGGCTT +
Preference number: 4 (lower is better)
Translates to: CAGPREYGSFGRYCSALPGSPTE*LPGGWL
Trigger: AAGCCAACCCCCTGGCAAGCATTCTGTAGGGGACCC...AGGCAGGGCAGAGCAATACCTTCCGAAGCTTCCATATTCCCTGGGGCCAGCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317477.8
ENST00000371153.9
CDS-3UTR GCA 90 bp ACCAGTCTGCACGGTGATTCTTCTAGGGTCCCCTACAGAATGCTTGCCAGGGGGCCTGCCTGGGTCCCTTaGTCCTATTGCAGCCAGAAG +
Preference number: 4 (lower is better)
Translates to: TSLHGDSSRVPYRMLARGPAWVP*SYCSQK
Trigger: CTTCTGGCTGCAATAGGAGCAAGGGACCCAGGCAGG...CCCCCTGGCAAGCATTCTGTAGGGGACCCTAGAAGAATCACCGTGCAGACTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317477.8
ENST00000371153.9
CDS-3UTR GCA 90 bp CCAGTCTGCACGGTGATTCTTCTAGGGTCCCCTACAGAATGCTTGCCAGGGGGTACAAGTCCTCTGGGGTaGTGTCCTCACCGCTGGTCT +
Preference number: 4 (lower is better)
Translates to: PVCTVILLGSPTECLPGGTSPLG*CPHRWS
Trigger: AGACCAGCGGTGAGGACAGCACCCCAGAGGACTTGT...ACCCCCTGGCAAGCATTCTGTAGGGGACCCTAGAAGAATCACCGTGCAGACTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR GCA 90 bp AAGGATAGGCCAGAGGCTTGCTACTCAAAGTGTGGTTGTGGCTCGATAGCATCAAGGTGCCCTCAGGGATaGCCTGCCCAGCCTCGCAGG +
Preference number: 4 (lower is better)
Translates to: KDRPEACYSKCGCGSIASRCPQG*PAQPRR
Trigger: CCTGCGAGGCTGGGCAGGGCATCCCTGAGGGCACCT...TGATGCTATCGAGCCACAACCACACTTTGAGTAGCAAGCCTCTGGCCTATCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS-3UTR GCA 90 bp GTATTGCTCTGCCCTGCCTGGGTCCCTTGCTCCTATTGCAGCCAGAAGTCCCAAGTTTCAGGCTGGAGATaGTGCCTGGATCCACCCTGG +
Preference number: 4 (lower is better)
Translates to: VLLCPAWVPCSYCSQKSQVSGWR*CLDPPW
Trigger: CCAGGGTGGATCCAGGCAGCATCTCCAGCCTGAAAC...TTGGGACTTCTGGCTGCAATAGGAGCAAGGGACCCAGGCAGGGCAGAGCAATAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS-3UTR GCA 90 bp TGGAAGCTTCGGAAGGTATTGCTCTGCCCTGCCTGGGTCCCTTGCTCCTATTGCTCCAGGGCCGAGACCTaGTGTTTCAGGCTGGAGATG +
Preference number: 4 (lower is better)
Translates to: WKLRKVLLCPAWVPCSYCSRAET*CFRLEM
Trigger: CATCTCCAGCCTGAAACAGCAGGTCTCGGCCCTGGA...GCAATAGGAGCAAGGGACCCAGGCAGGGCAGAGCAATACCTTCCGAAGCTTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS-3UTR CCA 90 bp GACACCGACGTACCCCTCACCTTGCACCTTGAACCCTGCTCTGAAGCCCGTGTACAGTTTCAGGAAGTGTaGGGAGTGAGGCTGGACCTC +
Preference number: 4 (lower is better)
Translates to: DTDVPLTLHLEPCSEARVQFQEV*GVRLDL
Trigger: GAGGTCCAGCCTCACTCCCCACACTTCCTGAAACTG...TACACGGGCTTCAGAGCAGGGTTCAAGGTGCAAGGTGAGGGGTACGTCGGTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CCA 90 bp CTGCCCTCTTCAAGGGCGAGGGAGGAGTCCAGAGAAGAAGGCTTTTGTTCCCCAATGTCCTCCCTGTCGTaGCTGACTCCCAGCATCAGC +
Preference number: 4 (lower is better)
Translates to: LPSSRAREESREEGFCSPMSSLS*LTPSIS
Trigger: GCTGATGCTGGGAGTCAGCCACGACAGGGAGGACAT...TGGGGAACAAAAGCCTTCTTCTCTGGACTCCTCCCTCGCCCTTGAAGAGGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CCA 90 bp TGCCCTCTTCAAGGGCGAGGGAGGAGTCCAGAGAAGAAGGCTTTTGTTCCCCACATGTCCTCCCTGTCGTaGCTGACTCCCAGCATCAGC +
Preference number: 4 (lower is better)
Translates to: CPLQGRGRSPEKKAFVPHMSSLS*LTPSIS
Trigger: GCTGATGCTGGGAGTCAGCCACGACAGGGAGGACAT...GTGGGGAACAAAAGCCTTCTTCTCTGGACTCCTCCCTCGCCCTTGAAGAGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CCA 90 bp GGAGGAGTCCAGAGAAGAAGGCTTTTGTTCCCCACGGCCAGTTCTTCTGCAGCCTGCTGTCCTCACCGCTaGTCTCCTCACTTGAGGTGG +
Preference number: 4 (lower is better)
Translates to: GGVQRRRLLFPTASSSAACCPHR*SPHLRW
Trigger: CCACCTCAAGTGAGGAGACCAGCGGTGAGGACAGCA...GGCTGCAGAAGAACTGGCCGTGGGGAACAAAAGCCTTCTTCTCTGGACTCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CCA 90 bp TTCAAGGGCGAGGGAGGAGTCCAGAGAAGAAGGCTTTTGTTCCCCACGGCCAGTTGCTGTCCTCACCGCTaGTCTCCTCACTTGAGGTGG +
Preference number: 4 (lower is better)
Translates to: FKGEGGVQRRRLLFPTASCCPHR*SPHLRW
Trigger: CCACCTCAAGTGAGGAGACCAGCGGTGAGGACAGCA...ACTGGCCGTGGGGAACAAAAGCCTTCTTCTCTGGACTCCTCCCTCGCCCTTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CCA 90 bp TGCCCTCTTCAAGGGCGAGGGAGGAGTCCAGAGAAGAAGGCTTTTGTTCCCCACGTCAGACAAGTCCTCTaGGGTGCTGTCCTCACCGCT +
Preference number: 4 (lower is better)
Translates to: CPLQGRGRSPEKKAFVPHVRQVL*GAVLTA
Trigger: AGCGGTGAGGACAGCACCCCAGAGGACTTGTCTGAC...GTGGGGAACAAAAGCCTTCTTCTCTGGACTCCTCCCTCGCCCTTGAAGAGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CCA 90 bp CCAGTCTGCACGGTGATTCTTCTAGGGTCCCCTACAGAATGCTTGCCAGGGGGTGTTTCTGGCAGATGCTaGCTCAGTGCCCGGCATGCA +
Preference number: 4 (lower is better)
Translates to: PVCTVILLGSPTECLPGGVSGRC*LSARHA
Trigger: TGCATGCCGGGCACTGAGCCAGCATCTGCCAGAAAC...ACCCCCTGGCAAGCATTCTGTAGGGGACCCTAGAAGAATCACCGTGCAGACTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CCA 90 bp CCAGTCTGCACGGTGATTCTTCTAGGGTCCCCTACAGAATGCTTGCCAGGGGGTGGTGGTCCCAGTTTCTaGCAGATGCTGGCTCAGTGC +
Preference number: 4 (lower is better)
Translates to: PVCTVILLGSPTECLPGGGGPSF*QMLAQC
Trigger: GCACTGAGCCAGCATCTGCCAGAAACTGGGACCACC...ACCCCCTGGCAAGCATTCTGTAGGGGACCCTAGAAGAATCACCGTGCAGACTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CCA 90 bp TGGAAGCTTCGGAAGGTATTGCTCTGCCCTGCCTGGGTCCCTTGCTCCTATTGCGGTGGTCCCAGTTTCTaGCAGATGCTGGCTCAGTGC +
Preference number: 4 (lower is better)
Translates to: WKLRKVLLCPAWVPCSYCGGPSF*QMLAQC
Trigger: GCACTGAGCCAGCATCTGCCAGAAACTGGGACCACC...GCAATAGGAGCAAGGGACCCAGGCAGGGCAGAGCAATACCTTCCGAAGCTTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS-3UTR CCA 90 bp GATGAAATTGCGGCCCAAGGAGGTTTCATGACTCACCACAGGGGCACCCAGCAAGCGTGGCAGGCATGCTaGATGCTCTCAAGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: DEIAAQGGFMTHHRGTQQAWQAC*MLSRAG
Trigger: CCCAGCTCTTGAGAGCATCCAGCATGCCTGCCACGC...TTGCTGGGTGCCCCTGTGGTGAGTCATGAAACCTCCTTGGGCCGCAATTTCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS-3UTR CCA 90 bp TTCAGTTTCACCAGTCTGCACGGTGATTCTTCTAGGGTCCCCTACAGAATGCTTAGGCCGGTGGCTCCTTaGGTGGGTGAGCCTGGGCCG +
Preference number: 4 (lower is better)
Translates to: FSFTSLHGDSSRVPYRMLRPVAP*VGEPGP
Trigger: CGGCCCAGGCTCACCCACCCAAGGAGCCACCGGCCT...AAGCATTCTGTAGGGGACCCTAGAAGAATCACCGTGCAGACTGGTGAAACTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS-3UTR CCA 90 bp CCCCTCACCTTGCACCTTGAACCCTGCTCTGAAGCCCGTGTAGTTTTCAGGCTTGAGAACAGCCCCCTCTaGGTGGATGTGGTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: PLTLHLEPCSEARVVFRLENSPL*VDVVLQ
Trigger: CTGCAGCACCACATCCACCCAGAGGGGGCTGTTCTC...AAGCCTGAAAACTACACGGGCTTCAGAGCAGGGTTCAAGGTGCAAGGTGAGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000371150.5
CDS-3UTR TCA 90 bp TGCCCTCTTCAAGGGCGAGGGAGGAGTCCAGAGAAGAAGGCTTTTGTTCCCCACCGGAAGCCAAGGGAGTaGTCATTACGGCAGTGTAGC +
Preference number: 4 (lower is better)
Translates to: CPLQGRGRSPEKKAFVPHRKPRE*SLRQCS
Trigger: GCTACACTGCCGTAATGATCACTCCCTTGGCTTCCG...GTGGGGAACAAAAGCCTTCTTCTCTGGACTCCTCCCTCGCCCTTGAAGAGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR TCA 90 bp TTGCTCTGCCCTGCCTGGGTCCCTTGCTCCTATTGCAGCCAGAAGTCCCAAAAACACTGTCAGGAAGGCTaGAGTTTCGGGGCAGAGTGC +
Preference number: 4 (lower is better)
Translates to: LLCPAWVPCSYCSQKSQKHCQEG*SFGAEC
Trigger: GCACTCTGCCCCGAAACTTCAGCCTTCCTGACAGTG...TTTTTGGGACTTCTGGCTGCAATAGGAGCAAGGGACCCAGGCAGGGCAGAGCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS-3UTR GCA 90 bp GACACCGACGTACCCCTCACCTTGCACCTTGAACCCTGCTCTGAAGCCCGTGTATCTGATGGTCCACATTaGAGACGCCTGTCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: DTDVPLTLHLEPCSEARVSDGPH*RRLSPA
Trigger: TGCTGGAGACAGGCGTCTGCAATGTGGACCATCAGA...TACACGGGCTTCAGAGCAGGGTTCAAGGTGCAAGGTGAGGGGTACGTCGGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR GCA 90 bp TGGCCTGTGACCTCTGCCCTCTTCAAGGGCGAGGGAGGAGTCCAGAGAAGAAGGGTCTTCATTGGTCTCTaGGGAAGCCAAGGGAGTGAT +
Preference number: 4 (lower is better)
Translates to: WPVTSALFKGEGGVQRRRVFIGL*GSQGSD
Trigger: ATCACTCCCTTGGCTTCCGCAGAGACCAATGAAGAC...CCTTCTTCTCTGGACTCCTCCCTCGCCCTTGAAGAGGGCAGAGGTCACAGGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR GCA 90 bp TGCCCTCTTCAAGGGCGAGGGAGGAGTCCAGAGAAGAAGGCTTTTGTTCCCCACCTGCAGATTGACATCTaGCTGGCAGCTAAGCAGCGC +
Preference number: 4 (lower is better)
Translates to: CPLQGRGRSPEKKAFVPHLQIDI*LAAKQR
Trigger: GCGCTGCTTAGCTGCCAGGCAGATGTCAATCTGCAG...GTGGGGAACAAAAGCCTTCTTCTCTGGACTCCTCCCTCGCCCTTGAAGAGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR GCA 90 bp TTTGGATGTTTGGATGACACCGACGTACCCCTCACCTTGCACCTTGAACCCTGCCCTTGTCAGTCAGGCTaGTGTCGCAGGCTGGGTGTG +
Preference number: 4 (lower is better)
Translates to: FGCLDDTDVPLTLHLEPCPCQSG*CRRLGV
Trigger: CACACCCAGCCTGCGACAGCAGCCTGACTGACAAGG...GCAGGGTTCAAGGTGCAAGGTGAGGGGTACGTCGGTGTCATCCAAACATCCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR GCA 90 bp AACAAAGCTCCCAAATGGTGCTTGTTCAGTTTCACCAGTCTGCACGGTGATTCTACAGCCCCAGGGACCTaGCCTGCTCCGCGTGGGCTC +
Preference number: 4 (lower is better)
Translates to: NKAPKWCLFSFTSLHGDSTAPGT*PAPRGL
Trigger: GAGCCCACGCGGAGCAGGGCAGGTCCCTGGGGCTGT...AGAATCACCGTGCAGACTGGTGAAACTGAACAAGCACCATTTGGGAGCTTTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR GCA 90 bp GAAACAAAGCTCCCAAATGGTGCTTGTTCAGTTTCACCAGTCTGCACGGTGATTACAGCCCCAGGGACCTaGCCTGCTCCGCGTGGGCTC +
Preference number: 4 (lower is better)
Translates to: ETKLPNGACSVSPVCTVITAPGT*PAPRGL
Trigger: GAGCCCACGCGGAGCAGGGCAGGTCCCTGGGGCTGT...AATCACCGTGCAGACTGGTGAAACTGAACAAGCACCATTTGGGAGCTTTGTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR GCA 90 bp GGTGCTTGTTCAGTTTCACCAGTCTGCACGGTGATTCTTCTAGGGTCCCCTACACACGGCCAGTTCTTCTaGAGCCCCTACAGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: GACSVSPVCTVILLGSPTHGQFF*SPYSPR
Trigger: CCTGGGGCTGTAGGGGCTGCAGAAGAACTGGCCGTG...TGTAGGGGACCCTAGAAGAATCACCGTGCAGACTGGTGAAACTGAACAAGCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR GCA 90 bp GGTGCTTGTTCAGTTTCACCAGTCTGCACGGTGATTCTTCTAGGGTCCCCTACACTGGCCTGTGACCTCTaGCCTCTTCAAGGGCGAGGG +
Preference number: 4 (lower is better)
Translates to: GACSVSPVCTVILLGSPTLACDL*PLQGRG
Trigger: CCCTCGCCCTTGAAGAGGGCAGAGGTCACAGGCCAG...TGTAGGGGACCCTAGAAGAATCACCGTGCAGACTGGTGAAACTGAACAAGCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR GCA 90 bp TTCAAGGGCGAGGGAGGAGTCCAGAGAAGAAGGCTTTTGTTCCCCACGGCCAGTACGTACCCCTCACCTTaGACCTTGAACCCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: FKGEGGVQRRRLLFPTASTYPSP*TLNPAL
Trigger: CAGAGCAGGGTTCAAGGTGCAAGGTGAGGGGTACGT...ACTGGCCGTGGGGAACAAAAGCCTTCTTCTCTGGACTCCTCCCTCGCCCTTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR GCA 90 bp CTTCAAGGGCGAGGGAGGAGTCCAGAGAAGAAGGCTTTTGTTCCCCACGGCCAGGTGCTAATGTGCTCCTaGCTGCCTGCTTGCTACACA +
Preference number: 4 (lower is better)
Translates to: LQGRGRSPEKKAFVPHGQVLMCS*LPACYT
Trigger: TGTGTAGCAAGCAGGCAGGCAGGAGCACATTAGCAC...CTGGCCGTGGGGAACAAAAGCCTTCTTCTCTGGACTCCTCCCTCGCCCTTGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR GCA 90 bp GATGAAATTGCGGCCCAAGGAGGTTTCATGACTCACCACAGGGGCACCCAGCAAGGGTCCCCTACAGAATaGTTGCCAGGGGGTTGGCTT +
Preference number: 4 (lower is better)
Translates to: DEIAAQGGFMTHHRGTQQGSPTE*LPGGWL
Trigger: AAGCCAACCCCCTGGCAAGCATTCTGTAGGGGACCC...TTGCTGGGTGCCCCTGTGGTGAGTCATGAAACCTCCTTGGGCCGCAATTTCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317477.8
ENST00000371153.9
CDS-3UTR GCA 90 bp CCCCTCACCTTGCACCTTGAACCCTGCTCTGAAGCCCGTGTAGTTTTCAGGCTTGGGTCCCCTACAGAATaGTTGCCAGGGGGTTGGCTT +
Preference number: 4 (lower is better)
Translates to: PLTLHLEPCSEARVVFRLGSPTE*LPGGWL
Trigger: AAGCCAACCCCCTGGCAAGCATTCTGTAGGGGACCC...AAGCCTGAAAACTACACGGGCTTCAGAGCAGGGTTCAAGGTGCAAGGTGAGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR GCA 90 bp TTGCTCTGCCCTGCCTGGGTCCCTTGCTCCTATTGCAGCCAGAAGTCCCAAAAAACAAGTCCTCTGGGGTaGTGTCCTCACCGCTGGTCT +
Preference number: 4 (lower is better)
Translates to: LLCPAWVPCSYCSQKSQKTSPLG*CPHRWS
Trigger: AGACCAGCGGTGAGGACAGCACCCCAGAGGACTTGT...TTTTTGGGACTTCTGGCTGCAATAGGAGCAAGGGACCCAGGCAGGGCAGAGCAA
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS-3UTR GCA 90 bp TGGCCTGTGACCTCTGCCCTCTTCAAGGGCGAGGGAGGAGTCCAGAGAAGAAGGGTCACACTTCTTCTCTaGCTCGCTGTCAGACAAGTC +
Preference number: 4 (lower is better)
Translates to: WPVTSALFKGEGGVQRRRVTLLL*LAVRQV
Trigger: GACTTGTCTGACAGCGAGGCAGAGAAGAAGTGTGAC...CCTTCTTCTCTGGACTCCTCCCTCGCCCTTGAAGAGGGCAGAGGTCACAGGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR GCA 90 bp CAACCCCATCGAAACAAAGCTCCCAAATGGTGCTTGTTCAGTTTCACCAGTCTGGGGCAGCATGGCAGGTaGCCTCAGGGATGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: QPHRNKAPKWCLFSFTSLGQHGR*PQGCPA
Trigger: GGCAGGGCATCCCTGAGGGCACCTGCCATGCTGCCC...CAGACTGGTGAAACTGAACAAGCACCATTTGGGAGCTTTGTTTCGATGGGGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR GCA 90 bp GGAGGAGTCCAGAGAAGAAGGCTTTTGTTCCCCACGGCCAGTTCTTCTGCAGCCTGCCATCACAGACACTaGCTTCACCCTGAAGGGGAG +
Preference number: 4 (lower is better)
Translates to: GGVQRRRLLFPTASSSAACHHRH*LHPEGE
Trigger: CTCCCCTTCAGGGTGAAGGCAGTGTCTGTGATGGCA...GGCTGCAGAAGAACTGGCCGTGGGGAACAAAAGCCTTCTTCTCTGGACTCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS-3UTR GCA 90 bp GACACCGACGTACCCCTCACCTTGCACCTTGAACCCTGCTCTGAAGCCCGTGTAAGCAGTTCTGACCTGTaGCAGTTCCTCGGTTCTTCC +
Preference number: 4 (lower is better)
Translates to: DTDVPLTLHLEPCSEARVSSSDL*QFLGSS
Trigger: GGAAGAACCGAGGAACTGGCACAGGTCAGAACTGCT...TACACGGGCTTCAGAGCAGGGTTCAAGGTGCAAGGTGAGGGGTACGTCGGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS-3UTR GCA 90 bp CTGCCCTCTTCAAGGGCGAGGGAGGAGTCCAGAGAAGAAGGCTTTTGTTCCCCACAGTTCCACTGCTCCTaGAGGAGCTCCTGGATCTTC +
Preference number: 4 (lower is better)
Translates to: LPSSRAREESREEGFCSPQFHCS*RSSWIF
Trigger: GAAGATCCAGGAGCTCCTGCAGGAGCAGTGGAACTG...TGGGGAACAAAAGCCTTCTTCTCTGGACTCCTCCCTCGCCCTTGAAGAGGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS-3UTR GCA 90 bp TTCAAGGGCGAGGGAGGAGTCCAGAGAAGAAGGCTTTTGTTCCCCACGGCCAGTTTACCCAGGCTGGAGTaGAATGGCACGATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: FKGEGGVQRRRLLFPTASLPRLE*NGTISA
Trigger: AGCCGAGATCGTGCCATTGCACTCCAGCCTGGGTAA...ACTGGCCGTGGGGAACAAAAGCCTTCTTCTCTGGACTCCTCCCTCGCCCTTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS-3UTR GCA 90 bp TGCCCTCTTCAAGGGCGAGGGAGGAGTCCAGAGAAGAAGGCTTTTGTTCCCCACTCTAGCACCCACTTCTaGTCAAGGGCACCTCAGTGG +
Preference number: 4 (lower is better)
Translates to: CPLQGRGRSPEKKAFVPHSSTHF*SRAPQW
Trigger: CCACTGAGGTGCCCTTGAGCAGAAGTGGGTGCTAGA...GTGGGGAACAAAAGCCTTCTTCTCTGGACTCCTCCCTCGCCCTTGAAGAGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371150.5
CDS-3UTR CCA 90 bp CTGCCCTCTTCAAGGGCGAGGGAGGAGTCCAGAGAAGAAGGCTTTTGTTCCCCACAGTTTCAGGAAGTGTaGGGAGTGAGGCTGGACCTC +
Preference number: 4 (lower is better)
Translates to: LPSSRAREESREEGFCSPQFQEV*GVRLDL
Trigger: GAGGTCCAGCCTCACTCCCCACACTTCCTGAAACTG...TGGGGAACAAAAGCCTTCTTCTCTGGACTCCTCCCTCGCCCTTGAAGAGGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CCA 90 bp CTTCAAGGGCGAGGGAGGAGTCCAGAGAAGAAGGCTTTTGTTCCCCACGGCCAGGCCGAGGATCCATCGTaGTCCTGCAGATTGACATCT +
Preference number: 4 (lower is better)
Translates to: LQGRGRSPEKKAFVPHGQAEDPS*SCRLTS
Trigger: AGATGTCAATCTGCAGGACCACGATGGATCCTCGGC...CTGGCCGTGGGGAACAAAAGCCTTCTTCTCTGGACTCCTCCCTCGCCCTTGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CCA 90 bp ACCAGTCTGCACGGTGATTCTTCTAGGGTCCCCTACAGAATGCTTGCCAGGGGGGTGACTTCAGAGCGATaGACAAAGCTGTGCGGCCAG +
Preference number: 4 (lower is better)
Translates to: TSLHGDSSRVPYRMLARGVTSER*TKLCGQ
Trigger: CTGGCCGCACAGCTTTGTCCATCGCTCTGAAGTCAC...CCCCCTGGCAAGCATTCTGTAGGGGACCCTAGAAGAATCACCGTGCAGACTGGT
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CCA 90 bp TGTGCTGGCCCCAGGGAATATGGAAGCTTCGGAAGGTATTGCTCTGCCCTGCCTTGCTTGCCAGGGGGTTaGCTTAAATCCCCTCCCATC +
Preference number: 4 (lower is better)
Translates to: CAGPREYGSFGRYCSALPCLPGG*LKSPPI
Trigger: GATGGGAGGGGATTTAAGCCAACCCCCTGGCAAGCA...AGGCAGGGCAGAGCAATACCTTCCGAAGCTTCCATATTCCCTGGGGCCAGCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317477.8
ENST00000371153.9
CDS-3UTR CCA 90 bp CTTCAAGGGCGAGGGAGGAGTCCAGAGAAGAAGGCTTTTGTTCCCCACGGCCAGCTTGTTGAAGGTTCTTaGCGAGCTGCGGAAGTCCTG +
Preference number: 4 (lower is better)
Translates to: LQGRGRSPEKKAFVPHGQLVEGS*RAAEVL
Trigger: CAGGACTTCCGCAGCTCGCCAAGAACCTTCAACAAG...CTGGCCGTGGGGAACAAAAGCCTTCTTCTCTGGACTCCTCCCTCGCCCTTGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354381.3
ENST00000371153.9
CDS-3UTR CCA 90 bp CCCCTCACCTTGCACCTTGAACCCTGCTCTGAAGCCCGTGTAGTTTTCAGGCTTGTTTCTGGCAGATGCTaGCTCAGTGCCCGGCATGCA +
Preference number: 4 (lower is better)
Translates to: PLTLHLEPCSEARVVFRLVSGRC*LSARHA
Trigger: TGCATGCCGGGCACTGAGCCAGCATCTGCCAGAAAC...AAGCCTGAAAACTACACGGGCTTCAGAGCAGGGTTCAAGGTGCAAGGTGAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CCA 90 bp GATGAAATTGCGGCCCAAGGAGGTTTCATGACTCACCACAGGGGCACCCAGCAACGGGTGCTCCTTCCCTaGGAGATTGGAACTGGTCTC +
Preference number: 4 (lower is better)
Translates to: DEIAAQGGFMTHHRGTQQRVLLP*EIGTGL
Trigger: GAGACCAGTTCCAATCTCCCAGGGAAGGAGCACCCG...TTGCTGGGTGCCCCTGTGGTGAGTCATGAAACCTCCTTGGGCCGCAATTTCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS-3UTR TCA 90 bp TGGATGACACCGACGTACCCCTCACCTTGCACCTTGAACCCTGCTCTGAAGCCCTTTTGGATGTTTGGATaGCACCGACGTACCCCTCAC +
Preference number: 4 (lower is better)
Translates to: WMTPTYPSPCTLNPALKPFWMFG*HRRTPH
Trigger: GTGAGGGGTACGTCGGTGTCATCCAAACATCCAAAA...GGGCTTCAGAGCAGGGTTCAAGGTGCAAGGTGAGGGGTACGTCGGTGTCATCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR TCA 90 bp TGGCCTGTGACCTCTGCCCTCTTCAAGGGCGAGGGAGGAGTCCAGAGAAGAAGGCAGACTCAAAATAGCTaGGAGAATCTGACTCTGCCC +
Preference number: 4 (lower is better)
Translates to: WPVTSALFKGEGGVQRRRQTQNS*ENLTLP
Trigger: GGGCAGAGTCAGATTCTCTCAGCTATTTTGAGTCTG...CCTTCTTCTCTGGACTCCTCCCTCGCCCTTGAAGAGGGCAGAGGTCACAGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317477.8
ENST00000371153.9
CDS-3UTR GCA 90 bp CTGCCCTCTTCAAGGGCGAGGGAGGAGTCCAGAGAAGAAGGCTTTTGTTCCCCATCTGATGGTCCACATTaGAGACGCCTGTCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: LPSSRAREESREEGFCSPSDGPH*RRLSPA
Trigger: TGCTGGAGACAGGCGTCTGCAATGTGGACCATCAGA...TGGGGAACAAAAGCCTTCTTCTCTGGACTCCTCCCTCGCCCTTGAAGAGGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR GCA 90 bp CTGCCCTCTTCAAGGGCGAGGGAGGAGTCCAGAGAAGAAGGCTTTTGTTCCCCAGATCCATCGTGGTCCTaGAGATTGACATCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: LPSSRAREESREEGFCSPDPSWS*RLTSAW
Trigger: CCAGGCAGATGTCAATCTGCAGGACCACGATGGATC...TGGGGAACAAAAGCCTTCTTCTCTGGACTCCTCCCTCGCCCTTGAAGAGGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR GCA 90 bp CCAGTCTGCACGGTGATTCTTCTAGGGTCCCCTACAGAATGCTTGCCAGGGGGTGATCCATCGTGGTCCTaGAGATTGACATCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: PVCTVILLGSPTECLPGGDPSWS*RLTSAW
Trigger: CCAGGCAGATGTCAATCTGCAGGACCACGATGGATC...ACCCCCTGGCAAGCATTCTGTAGGGGACCCTAGAAGAATCACCGTGCAGACTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR GCA 90 bp CTTCAAGGGCGAGGGAGGAGTCCAGAGAAGAAGGCTTTTGTTCCCCACGGCCAGTTGCACCTTGAACCCTaGTCTGAAGCCCGTGTAGTT +
Preference number: 4 (lower is better)
Translates to: LQGRGRSPEKKAFVPHGQLHLEP*SEARVV
Trigger: AACTACACGGGCTTCAGAGCAGGGTTCAAGGTGCAA...CTGGCCGTGGGGAACAAAAGCCTTCTTCTCTGGACTCCTCCCTCGCCCTTGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR GCA 90 bp GACACCGACGTACCCCTCACCTTGCACCTTGAACCCTGCTCTGAAGCCCGTGTATTGCACCTTGAACCCTaGTCTGAAGCCCGTGTAGTT +
Preference number: 4 (lower is better)
Translates to: DTDVPLTLHLEPCSEARVLHLEP*SEARVV
Trigger: AACTACACGGGCTTCAGAGCAGGGTTCAAGGTGCAA...TACACGGGCTTCAGAGCAGGGTTCAAGGTGCAAGGTGAGGGGTACGTCGGTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR GCA 90 bp TGGATGACACCGACGTACCCCTCACCTTGCACCTTGAACCCTGCTCTGAAGCCCTTGCACCTTGAACCCTaGTCTGAAGCCCGTGTAGTT +
Preference number: 4 (lower is better)
Translates to: WMTPTYPSPCTLNPALKPLHLEP*SEARVV
Trigger: AACTACACGGGCTTCAGAGCAGGGTTCAAGGTGCAA...GGGCTTCAGAGCAGGGTTCAAGGTGCAAGGTGAGGGGTACGTCGGTGTCATCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR GCA 90 bp CCCCTCACCTTGCACCTTGAACCCTGCTCTGAAGCCCGTGTAGTTTTCAGGCTTACGTACCCCTCACCTTaGACCTTGAACCCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: PLTLHLEPCSEARVVFRLTYPSP*TLNPAL
Trigger: CAGAGCAGGGTTCAAGGTGCAAGGTGAGGGGTACGT...AAGCCTGAAAACTACACGGGCTTCAGAGCAGGGTTCAAGGTGCAAGGTGAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR GCA 90 bp CTTCAAGGGCGAGGGAGGAGTCCAGAGAAGAAGGCTTTTGTTCCCCACGGCCAGTCCTGCCTGCCTGCTTaGTACACAATGTTACAGAGG +
Preference number: 4 (lower is better)
Translates to: LQGRGRSPEKKAFVPHGQSCLPA*YTMLQR
Trigger: CCTCTGTAACATTGTGTAGCAAGCAGGCAGGCAGGA...CTGGCCGTGGGGAACAAAAGCCTTCTTCTCTGGACTCCTCCCTCGCCCTTGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR GCA 90 bp TGGATGACACCGACGTACCCCTCACCTTGCACCTTGAACCCTGCTCTGAAGCCCTCTAATGTGCTAATGTaGTCCTGCCTGCCTGCTTGC +
Preference number: 4 (lower is better)
Translates to: WMTPTYPSPCTLNPALKPSNVLM*SCLPAC
Trigger: GCAAGCAGGCAGGCAGGAGCACATTAGCACATTAGA...GGGCTTCAGAGCAGGGTTCAAGGTGCAAGGTGAGGGGTACGTCGGTGTCATCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR GCA 90 bp GAAACAAAGCTCCCAAATGGTGCTTGTTCAGTTTCACCAGTCTGCACGGTGATTCACGCAACCTCCGGGTaGACTGTCCGCGTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: ETKLPNGACSVSPVCTVIHATSG*TVRVPG
Trigger: GCCTGGGACGCGGACAGTGCACCCGGAGGTTGCGTG...AATCACCGTGCAGACTGGTGAAACTGAACAAGCACCATTTGGGAGCTTTGTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354381.3
ENST00000371153.9
CDS-3UTR GCA 90 bp AAGCTCCCAAATGGTGCTTGTTCAGTTTCACCAGTCTGCACGGTGATTCTTCTACACGCAACCTCCGGGTaGACTGTCCGCGTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: KLPNGACSVSPVCTVILLHATSG*TVRVPG
Trigger: GCCTGGGACGCGGACAGTGCACCCGGAGGTTGCGTG...TAGAAGAATCACCGTGCAGACTGGTGAAACTGAACAAGCACCATTTGGGAGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354381.3
ENST00000371153.9
CDS-3UTR GCA 90 bp GACACCGACGTACCCCTCACCTTGCACCTTGAACCCTGCTCTGAAGCCCGTGTAGTCACACTTCTTCTCTaGCTCGCTGTCAGACAAGTC +
Preference number: 4 (lower is better)
Translates to: DTDVPLTLHLEPCSEARVVTLLL*LAVRQV
Trigger: GACTTGTCTGACAGCGAGGCAGAGAAGAAGTGTGAC...TACACGGGCTTCAGAGCAGGGTTCAAGGTGCAAGGTGAGGGGTACGTCGGTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR GCA 90 bp GCCAAAGTGCTTCTTCTACCCTGTCAGATTTTAAGATTTCTCTGTCAACCCCATCCCCGCGTCGCCAGCTaGCAACAGCGCCCGAGTCCC +
Preference number: 4 (lower is better)
Translates to: AKVLLLPCQILRFLCQPHPRVAS*QQRPSP
Trigger: GGGACTCGGGCGCTGTTGGCAGCTGGCGACGCGGGG...ATGGGGTTGACAGAGAAATCTTAAAATCTGACAGGGTAGAAGAAGCACTTTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS-3UTR GCA 90 bp ACCAGTCTGCACGGTGATTCTTCTAGGGTCCCCTACAGAATGCTTGCCAGGGGGTACAACAGGAAGTGCTaGTCAGCCGAAGGGCCCATT +
Preference number: 4 (lower is better)
Translates to: TSLHGDSSRVPYRMLARGYNRKC*SAEGPI
Trigger: AATGGGCCCTTCGGCTGAGCAGCACTTCCTGTTGTA...CCCCCTGGCAAGCATTCTGTAGGGGACCCTAGAAGAATCACCGTGCAGACTGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371150.5
CDS-3UTR GCA 90 bp TTCAAGGGCGAGGGAGGAGTCCAGAGAAGAAGGCTTTTGTTCCCCACGGCCAGTAGCAGACTCGCATGCTaGCCTGCAAAGCAAAACGTG +
Preference number: 4 (lower is better)
Translates to: FKGEGGVQRRRLLFPTASSRLAC*PAKQNV
Trigger: CACGTTTTGCTTTGCAGGGCAGCATGCGAGTCTGCT...ACTGGCCGTGGGGAACAAAAGCCTTCTTCTCTGGACTCCTCCCTCGCCCTTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371150.5
CDS-3UTR GCA 90 bp ACCAGTCTGCACGGTGATTCTTCTAGGGTCCCCTACAGAATGCTTGCCAGGGGGGGAAGCAGACTCGCATaGTGCCCTGCAAAGCAAAAC +
Preference number: 4 (lower is better)
Translates to: TSLHGDSSRVPYRMLARGGSRLA*CPAKQN
Trigger: GTTTTGCTTTGCAGGGCAGCATGCGAGTCTGCTTCC...CCCCCTGGCAAGCATTCTGTAGGGGACCCTAGAAGAATCACCGTGCAGACTGGT
56% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000371150.5
CDS-3UTR CCA 90 bp TTCAAGGGCGAGGGAGGAGTCCAGAGAAGAAGGCTTTTGTTCCCCACGGCCAGTAAGGAAAGACAGCTTTaGCCTCTGTCCCTGCAGCTC +
Preference number: 4 (lower is better)
Translates to: FKGEGGVQRRRLLFPTASKERQL*PLSLQL
Trigger: GAGCTGCAGGGACAGAGGCCAAAGCTGTCTTTCCTT...ACTGGCCGTGGGGAACAAAAGCCTTCTTCTCTGGACTCCTCCCTCGCCCTTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317477.8
CDS-3UTR CCA 90 bp GGAGGAGTCCAGAGAAGAAGGCTTTTGTTCCCCACGGCCAGTTCTTCTGCAGCCCAGCCATGTCTTCATTaGTCTCTGCGGAAGCCAAGG +
Preference number: 4 (lower is better)
Translates to: GGVQRRRLLFPTASSSAAQPCLH*SLRKPR
Trigger: CCTTGGCTTCCGCAGAGACCAATGAAGACATGGCTG...GGCTGCAGAAGAACTGGCCGTGGGGAACAAAAGCCTTCTTCTCTGGACTCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CCA 90 bp TGGAAGCTTCGGAAGGTATTGCTCTGCCCTGCCTGGGTCCCTTGCTCCTATTGCGCCGAGGATCCATCGTaGTCCTGCAGATTGACATCT +
Preference number: 4 (lower is better)
Translates to: WKLRKVLLCPAWVPCSYCAEDPS*SCRLTS
Trigger: AGATGTCAATCTGCAGGACCACGATGGATCCTCGGC...GCAATAGGAGCAAGGGACCCAGGCAGGGCAGAGCAATACCTTCCGAAGCTTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317477.8
ENST00000371153.9
CDS-3UTR CCA 90 bp GAACAGATATTTGCTTCTAGGGGATATGAGGGGAAAGCACCGGGAATTACCATGGCTGCTGTCGCAGGCTaGGTGTGCCAGGAGCAGCCG +
Preference number: 4 (lower is better)
Translates to: EQIFASRGYEGKAPGITMAAVAG*VCQEQP
Trigger: CGGCTGCTCCTGGCACACCCAGCCTGCGACAGCAGC...CATGGTAATTCCCGGTGCTTTCCCCTCATATCCCCTAGAAGCAAATATCTGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317477.8
ENST00000371153.9
CDS-3UTR CCA 90 bp CCCCTCACCTTGCACCTTGAACCCTGCTCTGAAGCCCGTGTAGTTTTCAGGCTTTGCTTGCCAGGGGGTTaGCTTAAATCCCCTCCCATC +
Preference number: 4 (lower is better)
Translates to: PLTLHLEPCSEARVVFRLCLPGG*LKSPPI
Trigger: GATGGGAGGGGATTTAAGCCAACCCCCTGGCAAGCA...AAGCCTGAAAACTACACGGGCTTCAGAGCAGGGTTCAAGGTGCAAGGTGAGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CCA 90 bp GACACCGACGTACCCCTCACCTTGCACCTTGAACCCTGCTCTGAAGCCCGTGTAGGGCACCCAGCAAATTaGCATCTGAGCCAAAATGAG +
Preference number: 4 (lower is better)
Translates to: DTDVPLTLHLEPCSEARVGHPAN*HLSQNE
Trigger: CTCATTTTGGCTCAGATGCCAATTTGCTGGGTGCCC...TACACGGGCTTCAGAGCAGGGTTCAAGGTGCAAGGTGAGGGGTACGTCGGTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317477.8
ENST00000371153.9
CDS-3UTR CCA 90 bp CTTCAAGGGCGAGGGAGGAGTCCAGAGAAGAAGGCTTTTGTTCCCCACGGCCAGGGGCACCCAGCAAATTaGCATCTGAGCCAAAATGAG +
Preference number: 4 (lower is better)
Translates to: LQGRGRSPEKKAFVPHGQGHPAN*HLSQNE
Trigger: CTCATTTTGGCTCAGATGCCAATTTGCTGGGTGCCC...CTGGCCGTGGGGAACAAAAGCCTTCTTCTCTGGACTCCTCCCTCGCCCTTGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000317477.8
ENST00000371153.9
CDS-3UTR CCA 90 bp TGCCCTCTTCAAGGGCGAGGGAGGAGTCCAGAGAAGAAGGCTTTTGTTCCCCACCTTGTTGAAGGTTCTTaGCGAGCTGCGGAAGTCCTG +
Preference number: 4 (lower is better)
Translates to: CPLQGRGRSPEKKAFVPHLVEGS*RAAEVL
Trigger: CAGGACTTCCGCAGCTCGCCAAGAACCTTCAACAAG...GTGGGGAACAAAAGCCTTCTTCTCTGGACTCCTCCCTCGCCCTTGAAGAGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354381.3
ENST00000371153.9
CDS-3UTR CCA 90 bp GACACCGACGTACCCCTCACCTTGCACCTTGAACCCTGCTCTGAAGCCCGTGTAGACATGCTTGTGATCTaGGCCGTCACACTTCTTCTC +
Preference number: 4 (lower is better)
Translates to: DTDVPLTLHLEPCSEARVDMLVI*AVTLLL
Trigger: GAGAAGAAGTGTGACGGCCCAGATCACAAGCATGTC...TACACGGGCTTCAGAGCAGGGTTCAAGGTGCAAGGTGAGGGGTACGTCGGTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CCA 90 bp CTTCAAGGGCGAGGGAGGAGTCCAGAGAAGAAGGCTTTTGTTCCCCACGGCCAGGACATGCTTGTGATCTaGGCCGTCACACTTCTTCTC +
Preference number: 4 (lower is better)
Translates to: LQGRGRSPEKKAFVPHGQDMLVI*AVTLLL
Trigger: GAGAAGAAGTGTGACGGCCCAGATCACAAGCATGTC...CTGGCCGTGGGGAACAAAAGCCTTCTTCTCTGGACTCCTCCCTCGCCCTTGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CCA 90 bp TGCCCTCTTCAAGGGCGAGGGAGGAGTCCAGAGAAGAAGGCTTTTGTTCCCCACGCCTCGCAGGTGAGATaGGCATCTTTGACATGCTTG +
Preference number: 4 (lower is better)
Translates to: CPLQGRGRSPEKKAFVPHASQVR*ASLTCL
Trigger: CAAGCATGTCAAAGATGCCCATCTCACCTGCGAGGC...GTGGGGAACAAAAGCCTTCTTCTCTGGACTCCTCCCTCGCCCTTGAAGAGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CCA 90 bp GCTAATGTGCTCCTGCCTGCCTGCTTGCTACACAATGTTACAGAGGGTAGAGTCCTTTCCTGGGCAGCATaGCAGGTGCCCTCAGGGATG +
Preference number: 4 (lower is better)
Translates to: ANVLLPACLLHNVTEGRVLSWAA*QVPSGM
Trigger: CATCCCTGAGGGCACCTGCCATGCTGCCCAGGAAAG...GACTCTACCCTCTGTAACATTGTGTAGCAAGCAGGCAGGCAGGAGCACATTAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CCA 90 bp CTGCCCTCTTCAAGGGCGAGGGAGGAGTCCAGAGAAGAAGGCTTTTGTTCCCCAAGAGCTGGTCTGTGGTaGTCCCAGTTTCTGGCAGAT +
Preference number: 4 (lower is better)
Translates to: LPSSRAREESREEGFCSPRAGLW*SQFLAD
Trigger: ATCTGCCAGAAACTGGGACCACCACAGACCAGCTCT...TGGGGAACAAAAGCCTTCTTCTCTGGACTCCTCCCTCGCCCTTGAAGAGGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CCA 90 bp CCAGTCTGCACGGTGATTCTTCTAGGGTCCCCTACAGAATGCTTGCCAGGGGGTAGAGCTGGTCTGTGGTaGTCCCAGTTTCTGGCAGAT +
Preference number: 4 (lower is better)
Translates to: PVCTVILLGSPTECLPGGRAGLW*SQFLAD
Trigger: ATCTGCCAGAAACTGGGACCACCACAGACCAGCTCT...ACCCCCTGGCAAGCATTCTGTAGGGGACCCTAGAAGAATCACCGTGCAGACTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CCA 90 bp ACCAGTCTGCACGGTGATTCTTCTAGGGTCCCCTACAGAATGCTTGCCAGGGGGCTTTGCCTCAAGAGCTaGTCTGTGGTGGTCCCAGTT +
Preference number: 4 (lower is better)
Translates to: TSLHGDSSRVPYRMLARGLCLKS*SVVVPV
Trigger: AACTGGGACCACCACAGACCAGCTCTTGAGGCAAAG...CCCCCTGGCAAGCATTCTGTAGGGGACCCTAGAAGAATCACCGTGCAGACTGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CCA 90 bp TTCAAGGGCGAGGGAGGAGTCCAGAGAAGAAGGCTTTTGTTCCCCACGGCCAGTCTTTGCCTCAAGAGCTaGTCTGTGGTGGTCCCAGTT +
Preference number: 4 (lower is better)
Translates to: FKGEGGVQRRRLLFPTASLCLKS*SVVVPV
Trigger: AACTGGGACCACCACAGACCAGCTCTTGAGGCAAAG...ACTGGCCGTGGGGAACAAAAGCCTTCTTCTCTGGACTCCTCCCTCGCCCTTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CCA 90 bp GGTGCTTGTTCAGTTTCACCAGTCTGCACGGTGATTCTTCTAGGGTCCCCTACATGCTGTGCAGCAGCGTaGCAGGCATGCTGGATGCTC +
Preference number: 4 (lower is better)
Translates to: GACSVSPVCTVILLGSPTCCAAA*QACWML
Trigger: GAGCATCCAGCATGCCTGCCACGCTGCTGCACAGCA...TGTAGGGGACCCTAGAAGAATCACCGTGCAGACTGGTGAAACTGAACAAGCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS-3UTR CCA 90 bp TTGCTCTGCCCTGCCTGGGTCCCTTGCTCCTATTGCAGCCAGAAGTCCCAAAAACGTGGGCTGGAGCTGTaGAAACCTGCCAATCCTTCT +
Preference number: 4 (lower is better)
Translates to: LLCPAWVPCSYCSQKSQKRGLEL*KPANPS
Trigger: AGAAGGATTGGCAGGTTTCCACAGCTCCAGCCCACG...TTTTTGGGACTTCTGGCTGCAATAGGAGCAAGGGACCCAGGCAGGGCAGAGCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS-3UTR CCA 90 bp GGTGCTTGTTCAGTTTCACCAGTCTGCACGGTGATTCTTCTAGGGTCCCCTACATGCCTGGATCCACCCTaGCAAGGCCCAGGCTTTCCT +
Preference number: 4 (lower is better)
Translates to: GACSVSPVCTVILLGSPTCLDPP*QGPGFP
Trigger: AGGAAAGCCTGGGCCTTGCCAGGGTGGATCCAGGCA...TGTAGGGGACCCTAGAAGAATCACCGTGCAGACTGGTGAAACTGAACAAGCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS-3UTR CCA 90 bp TGTGCTGGCCCCAGGGAATATGGAAGCTTCGGAAGGTATTGCTCTGCCCTGCCTTCCTCTTCCTGCTGCTaGAGAGCAGTTCTGACCTGT +
Preference number: 4 (lower is better)
Translates to: CAGPREYGSFGRYCSALPSSSCC*RAVLTC
Trigger: ACAGGTCAGAACTGCTCTCCAGCAGCAGGAAGAGGA...AGGCAGGGCAGAGCAATACCTTCCGAAGCTTCCATATTCCCTGGGGCCAGCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS-3UTR CCA 90 bp CCCCTCACCTTGCACCTTGAACCCTGCTCTGAAGCCCGTGTAGTTTTCAGGCTTTTTAAGGCTGGTCGATaGGGAGATCTCCACTGGCGG +
Preference number: 4 (lower is better)
Translates to: PLTLHLEPCSEARVVFRLFKAGR*GDLHWR
Trigger: CCGCCAGTGGAGATCTCCCCATCGACCAGCCTTAAA...AAGCCTGAAAACTACACGGGCTTCAGAGCAGGGTTCAAGGTGCAAGGTGAGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS-3UTR CCA 90 bp GGAGGAGTCCAGAGAAGAAGGCTTTTGTTCCCCACGGCCAGTTCTTCTGCAGCCCCATGTATGTCAGGCTaGTCTCAAACTCCCGACCTC +
Preference number: 4 (lower is better)
Translates to: GGVQRRRLLFPTASSSAAPCMSG*SQTPDL
Trigger: GAGGTCGGGAGTTTGAGACCAGCCTGACATACATGG...GGCTGCAGAAGAACTGGCCGTGGGGAACAAAAGCCTTCTTCTCTGGACTCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS-3UTR TCA 90 bp CTGCCCTCTTCAAGGGCGAGGGAGGAGTCCAGAGAAGAAGGCTTTTGTTCCCCAGGAACCACTCTTGACTaGTGGTGTTCAAGCTTTGCC +
Preference number: 4 (lower is better)
Translates to: LPSSRAREESREEGFCSPGTTLD*WCSSFA
Trigger: GGCAAAGCTTGAACACCATCAGTCAAGAGTGGTTCC...TGGGGAACAAAAGCCTTCTTCTCTGGACTCCTCCCTCGCCCTTGAAGAGGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR TCA 90 bp GTATTGCTCTGCCCTGCCTGGGTCCCTTGCTCCTATTGCAGCCAGAAGTCCCAAACGCGGAACCACTCTTaGCTGATGGTGTTCAAGCTT +
Preference number: 4 (lower is better)
Translates to: VLLCPAWVPCSYCSQKSQTRNHS*LMVFKL
Trigger: AAGCTTGAACACCATCAGTCAAGAGTGGTTCCGCGT...TTGGGACTTCTGGCTGCAATAGGAGCAAGGGACCCAGGCAGGGCAGAGCAATAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317477.8
ENST00000371153.9
CDS-3UTR TCA 90 bp CTTCAAGGGCGAGGGAGGAGTCCAGAGAAGAAGGCTTTTGTTCCCCACGGCCAGTGTGATCGGCCAAGTTaGCAAGCAGTTTCAGGAAGT +
Preference number: 4 (lower is better)
Translates to: LQGRGRSPEKKAFVPHGQCDRPS*QAVSGS
Trigger: ACTTCCTGAAACTGCTTGTCAACTTGGCCGATCACA...CTGGCCGTGGGGAACAAAAGCCTTCTTCTCTGGACTCCTCCCTCGCCCTTGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR TCA 90 bp GAAACAAAGCTCCCAAATGGTGCTTGTTCAGTTTCACCAGTCTGCACGGTGATTCCTCCCTGTCGTGGCTaGCTCCCAGCATCAGCGCAG +
Preference number: 4 (lower is better)
Translates to: ETKLPNGACSVSPVCTVIPPCRG*LPASAQ
Trigger: CTGCGCTGATGCTGGGAGTCAGCCACGACAGGGAGG...AATCACCGTGCAGACTGGTGAAACTGAACAAGCACCATTTGGGAGCTTTGTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR TCA 90 bp TTCAGTTTCACCAGTCTGCACGGTGATTCTTCTAGGGTCCCCTACAGAATGCTTGGTGACAGGCCACCATaGGGGCCGAGGATCCATCGT +
Preference number: 4 (lower is better)
Translates to: FSFTSLHGDSSRVPYRMLGDRPP*GPRIHR
Trigger: ACGATGGATCCTCGGCCCTCATGGTGGCCTGTCACC...AAGCATTCTGTAGGGGACCCTAGAAGAATCACCGTGCAGACTGGTGAAACTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR TCA 90 bp CCAGTCTGCACGGTGATTCTTCTAGGGTCCCCTACAGAATGCTTGCCAGGGGGTTTTTGGATGTTTGGATaGCACCGACGTACCCCTCAC +
Preference number: 4 (lower is better)
Translates to: PVCTVILLGSPTECLPGGFWMFG*HRRTPH
Trigger: GTGAGGGGTACGTCGGTGTCATCCAAACATCCAAAA...ACCCCCTGGCAAGCATTCTGTAGGGGACCCTAGAAGAATCACCGTGCAGACTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR TCA 90 bp ACCAGTCTGCACGGTGATTCTTCTAGGGTCCCCTACAGAATGCTTGCCAGGGGGTCTTTGACATGCTTGTaGTCTGGGCCGTCACACTTC +
Preference number: 4 (lower is better)
Translates to: TSLHGDSSRVPYRMLARGSLTCL*SGPSHF
Trigger: GAAGTGTGACGGCCCAGATCACAAGCATGTCAAAGA...CCCCCTGGCAAGCATTCTGTAGGGGACCCTAGAAGAATCACCGTGCAGACTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR TCA 90 bp CAACCCCATCGAAACAAAGCTCCCAAATGGTGCTTGTTCAGTTTCACCAGTCTGCCTCCCGGGTTCAAGTaGGTCTCCTGCCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: QPHRNKAPKWCLFSFTSLPPGFK*VSCLSL
Trigger: GAGGCTGAGGCAGGAGACTCACTTGAACCCGGGAGG...CAGACTGGTGAAACTGAACAAGCACCATTTGGGAGCTTTGTTTCGATGGGGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS-3UTR TCA 90 bp TGGCCTGTGACCTCTGCCCTCTTCAAGGGCGAGGGAGGAGTCCAGAGAAGAAGGCACTTTACCCGACAGTaGAGAGGGTTTGATCTGTTA +
Preference number: 4 (lower is better)
Translates to: WPVTSALFKGEGGVQRRRHFTRQ*RGFDLL
Trigger: TAACAGATCAAACCCTCTTCACTGTCGGGTAAAGTG...CCTTCTTCTCTGGACTCCTCCCTCGCCCTTGAAGAGGGCAGAGGTCACAGGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371150.5
CDS-3UTR GCA 90 bp CTGCCCTCTTCAAGGGCGAGGGAGGAGTCCAGAGAAGAAGGCTTTTGTTCCCCATTGCACCTTGAACCCTaGTCTGAAGCCCGTGTAGTT +
Preference number: 4 (lower is better)
Translates to: LPSSRAREESREEGFCSPLHLEP*SEARVV
Trigger: AACTACACGGGCTTCAGAGCAGGGTTCAAGGTGCAA...TGGGGAACAAAAGCCTTCTTCTCTGGACTCCTCCCTCGCCCTTGAAGAGGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR GCA 90 bp TGCCCTCTTCAAGGGCGAGGGAGGAGTCCAGAGAAGAAGGCTTTTGTTCCCCACTCCTGCCTGCCTGCTTaGTACACAATGTTACAGAGG +
Preference number: 4 (lower is better)
Translates to: CPLQGRGRSPEKKAFVPHSCLPA*YTMLQR
Trigger: CCTCTGTAACATTGTGTAGCAAGCAGGCAGGCAGGA...GTGGGGAACAAAAGCCTTCTTCTCTGGACTCCTCCCTCGCCCTTGAAGAGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR GCA 90 bp TTCAAGGGCGAGGGAGGAGTCCAGAGAAGAAGGCTTTTGTTCCCCACGGCCAGTGTGCTCCTGCCTGCCTaGTTGCTACACAATGTTACA +
Preference number: 4 (lower is better)
Translates to: FKGEGGVQRRRLLFPTASVLLPA*LLHNVT
Trigger: TGTAACATTGTGTAGCAAGCAGGCAGGCAGGAGCAC...ACTGGCCGTGGGGAACAAAAGCCTTCTTCTCTGGACTCCTCCCTCGCCCTTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR GCA 90 bp GATGAAATTGCGGCCCAAGGAGGTTTCATGACTCACCACAGGGGCACCCAGCAAGTGCTAATGTGCTCCTaGCTGCCTGCTTGCTACACA +
Preference number: 4 (lower is better)
Translates to: DEIAAQGGFMTHHRGTQQVLMCS*LPACYT
Trigger: TGTGTAGCAAGCAGGCAGGCAGGAGCACATTAGCAC...TTGCTGGGTGCCCCTGTGGTGAGTCATGAAACCTCCTTGGGCCGCAATTTCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317477.8
ENST00000371153.9
CDS-3UTR GCA 90 bp CCAGTCTGCACGGTGATTCTTCTAGGGTCCCCTACAGAATGCTTGCCAGGGGGTTCTAATGTGCTAATGTaGTCCTGCCTGCCTGCTTGC +
Preference number: 4 (lower is better)
Translates to: PVCTVILLGSPTECLPGGSNVLM*SCLPAC
Trigger: GCAAGCAGGCAGGCAGGAGCACATTAGCACATTAGA...ACCCCCTGGCAAGCATTCTGTAGGGGACCCTAGAAGAATCACCGTGCAGACTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR GCA 90 bp CTGCCCTCTTCAAGGGCGAGGGAGGAGTCCAGAGAAGAAGGCTTTTGTTCCCCATCTAATGTGCTAATGTaGTCCTGCCTGCCTGCTTGC +
Preference number: 4 (lower is better)
Translates to: LPSSRAREESREEGFCSPSNVLM*SCLPAC
Trigger: GCAAGCAGGCAGGCAGGAGCACATTAGCACATTAGA...TGGGGAACAAAAGCCTTCTTCTCTGGACTCCTCCCTCGCCCTTGAAGAGGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR GCA 90 bp CTGCCCTCTTCAAGGGCGAGGGAGGAGTCCAGAGAAGAAGGCTTTTGTTCCCCACCCCTACAGAATGCTTaGCAGGGGGTTGGCTTAAAT +
Preference number: 4 (lower is better)
Translates to: LPSSRAREESREEGFCSPPLQNA*QGVGLN
Trigger: ATTTAAGCCAACCCCCTGGCAAGCATTCTGTAGGGG...TGGGGAACAAAAGCCTTCTTCTCTGGACTCCTCCCTCGCCCTTGAAGAGGGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR GCA 90 bp TGGCCTGTGACCTCTGCCCTCTTCAAGGGCGAGGGAGGAGTCCAGAGAAGAAGGGCATTGATGCCAAAGTaGTTCTTCTACCCTGTCAGA +
Preference number: 4 (lower is better)
Translates to: WPVTSALFKGEGGVQRRRALMPK*FFYPVR
Trigger: TCTGACAGGGTAGAAGAAGCACTTTGGCATCAATGC...CCTTCTTCTCTGGACTCCTCCCTCGCCCTTGAAGAGGGCAGAGGTCACAGGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR GCA 90 bp TGCCCTCTTCAAGGGCGAGGGAGGAGTCCAGAGAAGAAGGCTTTTGTTCCCCACGGTCCCATTACCTCCTaGACGGAAGCCATAGTCTTT +
Preference number: 4 (lower is better)
Translates to: CPLQGRGRSPEKKAFVPHGPITS*TEAIVF
Trigger: AAAGACTATGGCTTCCGTGCAGGAGGTAATGGGACC...GTGGGGAACAAAAGCCTTCTTCTCTGGACTCCTCCCTCGCCCTTGAAGAGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR GCA 90 bp GGAGGAGTCCAGAGAAGAAGGCTTTTGTTCCCCACGGCCAGTTCTTCTGCAGCCCTGCAGGTTCAAAGGTaGCATCACAGACACTGCCTT +
Preference number: 4 (lower is better)
Translates to: GGVQRRRLLFPTASSSAALQVQR*HHRHCL
Trigger: AAGGCAGTGTCTGTGATGGCACCTTTGAACCTGCAG...GGCTGCAGAAGAACTGGCCGTGGGGAACAAAAGCCTTCTTCTCTGGACTCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS-3UTR GCA 90 bp ACCAGTCTGCACGGTGATTCTTCTAGGGTCCCCTACAGAATGCTTGCCAGGGGGATTTCCTCTTCCTGCTaGTGGAGAGCAGTTCTGACC +
Preference number: 4 (lower is better)
Translates to: TSLHGDSSRVPYRMLARGISSSC*WRAVLT
Trigger: GGTCAGAACTGCTCTCCAGCAGCAGGAAGAGGAAAT...CCCCCTGGCAAGCATTCTGTAGGGGACCCTAGAAGAATCACCGTGCAGACTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS-3UTR GCA 90 bp TTCAGTTTCACCAGTCTGCACGGTGATTCTTCTAGGGTCCCCTACAGAATGCTTAGCTTGGAGGCTGGCTaGTTGATGGCGCTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: FSFTSLHGDSSRVPYRMLSLEAG*LMALAS
Trigger: GCTGGCCAGCGCCATCAAGCAGCCAGCCTCCAAGCT...AAGCATTCTGTAGGGGACCCTAGAAGAATCACCGTGCAGACTGGTGAAACTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS-3UTR CCA 90 bp AAGTATTGCTTTTCTAATGTGCTAATGTGCTCCTGCCTGCCTGCTTGCTACACAGCTGCTGTCGCAGGCTaGGTGTGCCAGGAGCAGCCG +
Preference number: 4 (lower is better)
Translates to: KYCFSNVLMCSCLPACYTAAVAG*VCQEQP
Trigger: CGGCTGCTCCTGGCACACCCAGCCTGCGACAGCAGC...TGTGTAGCAAGCAGGCAGGCAGGAGCACATTAGCACATTAGAAAAGCAATACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CCA 90 bp TTTGGATGTTTGGATGACACCGACGTACCCCTCACCTTGCACCTTGAACCCTGCGTGACTTCAGAGCGATaGACAAAGCTGTGCGGCCAG +
Preference number: 4 (lower is better)
Translates to: FGCLDDTDVPLTLHLEPCVTSER*TKLCGQ
Trigger: CTGGCCGCACAGCTTTGTCCATCGCTCTGAAGTCAC...GCAGGGTTCAAGGTGCAAGGTGAGGGGTACGTCGGTGTCATCCAAACATCCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CCA 90 bp AAGCTCCCAAATGGTGCTTGTTCAGTTTCACCAGTCTGCACGGTGATTCTTCTACTGCCCTGCTCCGCGTaGGCTCTCAGAAGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: KLPNGACSVSPVCTVILLLPCSA*ALRSPA
Trigger: TGCTGGGCTTCTGAGAGCCCACGCGGAGCAGGGCAG...TAGAAGAATCACCGTGCAGACTGGTGAAACTGAACAAGCACCATTTGGGAGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CCA 90 bp GCTAATGTGCTCCTGCCTGCCTGCTTGCTACACAATGTTACAGAGGGTAGAGTCTTGCTCTGCCCTGCCTaGGTCCCTTGCTCCTATTGC +
Preference number: 4 (lower is better)
Translates to: ANVLLPACLLHNVTEGRVLLCPA*VPCSYC
Trigger: GCAATAGGAGCAAGGGACCCAGGCAGGGCAGAGCAA...GACTCTACCCTCTGTAACATTGTGTAGCAAGCAGGCAGGCAGGAGCACATTAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317477.8
ENST00000371153.9
CDS-3UTR CCA 90 bp TGTGCTGGCCCCAGGGAATATGGAAGCTTCGGAAGGTATTGCTCTGCCCTGCCTAAACCTTGCATGTGCTaGCCCCAGGGAATATGGAAG +
Preference number: 4 (lower is better)
Translates to: CAGPREYGSFGRYCSALPKPCMC*PQGIWK
Trigger: CTTCCATATTCCCTGGGGCCAGCACATGCAAGGTTT...AGGCAGGGCAGAGCAATACCTTCCGAAGCTTCCATATTCCCTGGGGCCAGCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317477.8
ENST00000371153.9
CDS-3UTR CCA 90 bp TTCAAGGGCGAGGGAGGAGTCCAGAGAAGAAGGCTTTTGTTCCCCACGGCCAGTTGTCTTCTCCATCTTTaGAGCGCTGACCCTCAGTGT +
Preference number: 4 (lower is better)
Translates to: FKGEGGVQRRRLLFPTASCLLHL*SADPQC
Trigger: ACACTGAGGGTCAGCGCTCCAAAGATGGAGAAGACA...ACTGGCCGTGGGGAACAAAAGCCTTCTTCTCTGGACTCCTCCCTCGCCCTTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354381.3
ENST00000371153.9
CDS-3UTR CCA 90 bp CTGCCCTCTTCAAGGGCGAGGGAGGAGTCCAGAGAAGAAGGCTTTTGTTCCCCAGACATGCTTGTGATCTaGGCCGTCACACTTCTTCTC +
Preference number: 4 (lower is better)
Translates to: LPSSRAREESREEGFCSPDMLVI*AVTLLL
Trigger: GAGAAGAAGTGTGACGGCCCAGATCACAAGCATGTC...TGGGGAACAAAAGCCTTCTTCTCTGGACTCCTCCCTCGCCCTTGAAGAGGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CCA 90 bp TGGATGACACCGACGTACCCCTCACCTTGCACCTTGAACCCTGCTCTGAAGCCCGAGAGGACTGGTCTTTaGCATCTGTCTTCTCCATCT +
Preference number: 4 (lower is better)
Translates to: WMTPTYPSPCTLNPALKPERTGL*HLSSPS
Trigger: AGATGGAGAAGACAGATGCCAAAGACCAGTCCTCTC...GGGCTTCAGAGCAGGGTTCAAGGTGCAAGGTGAGGGGTACGTCGGTGTCATCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS-3UTR CCA 90 bp TGGAAGCTTCGGAAGGTATTGCTCTGCCCTGCCTGGGTCCCTTGCTCCTATTGCGGCCCTGAGTGTCTTTaGCGTTCTCTTGGTGAAACT +
Preference number: 4 (lower is better)
Translates to: WKLRKVLLCPAWVPCSYCGPECL*RSLGET
Trigger: AGTTTCACCAAGAGAACGCCAAAGACACTCAGGGCC...GCAATAGGAGCAAGGGACCCAGGCAGGGCAGAGCAATACCTTCCGAAGCTTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS-3UTR CCA 90 bp GACACCGACGTACCCCTCACCTTGCACCTTGAACCCTGCTCTGAAGCCCGTGTAAAGCACACGTTCTGCTaGGCTCTGATTCCCTTGTTT +
Preference number: 4 (lower is better)
Translates to: DTDVPLTLHLEPCSEARVKHTFC*ALIPLF
Trigger: AAACAAGGGAATCAGAGCCCAGCAGAACGTGTGCTT...TACACGGGCTTCAGAGCAGGGTTCAAGGTGCAAGGTGAGGGGTACGTCGGTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS-3UTR CCA 90 bp GTATTGCTCTGCCCTGCCTGGGTCCCTTGCTCCTATTGCAGCCAGAAGTCCCAATCCTGCAGGAGCTCCTaGATCTTCTTCACATACTGC +
Preference number: 4 (lower is better)
Translates to: VLLCPAWVPCSYCSQKSQSCRSS*IFFTYC
Trigger: GCAGTATGTGAAGAAGATCCAGGAGCTCCTGCAGGA...TTGGGACTTCTGGCTGCAATAGGAGCAAGGGACCCAGGCAGGGCAGAGCAATAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS-3UTR TCA 90 bp AAGCTCCCAAATGGTGCTTGTTCAGTTTCACCAGTCTGCACGGTGATTCTTCTAAGGAAGTGTGGGGAGTaGGGCTGGACCTCGTGGAGG +
Preference number: 4 (lower is better)
Translates to: KLPNGACSVSPVCTVILLRKCGE*GWTSWR
Trigger: CCTCCACGAGGTCCAGCCTCACTCCCCACACTTCCT...TAGAAGAATCACCGTGCAGACTGGTGAAACTGAACAAGCACCATTTGGGAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR TCA 90 bp GGAGGAGTCCAGAGAAGAAGGCTTTTGTTCCCCACGGCCAGTTCTTCTGCAGCCTGTGATCGGCCAAGTTaGCAAGCAGTTTCAGGAAGT +
Preference number: 4 (lower is better)
Translates to: GGVQRRRLLFPTASSSAACDRPS*QAVSGS
Trigger: ACTTCCTGAAACTGCTTGTCAACTTGGCCGATCACA...GGCTGCAGAAGAACTGGCCGTGGGGAACAAAAGCCTTCTTCTCTGGACTCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR TCA 90 bp GCTCCCAAATGGTGCTTGTTCAGTTTCACCAGTCTGCACGGTGATTCTTCTAGGGCCGTGTTCCCGTTGTaGTCGGCCAAGTTGACAAGC +
Preference number: 4 (lower is better)
Translates to: APKWCLFSFTSLHGDSSRAVFPL*SAKLTS
Trigger: GCTTGTCAACTTGGCCGATCACAACGGGAACACGGC...CCTAGAAGAATCACCGTGCAGACTGGTGAAACTGAACAAGCACCATTTGGGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR TCA 90 bp TTTCATGACTCACCACAGGGGCACCCAGCAAATTGGCATCTGAGCCAAAATGAGCAGCTAAGCAGCGCTTaGACCATGTCCTCCCTGTCG +
Preference number: 4 (lower is better)
Translates to: FHDSPQGHPANWHLSQNEQLSSA*TMSSLS
Trigger: CGACAGGGAGGACATGGTTCAAGCGCTGCTTAGCTG...CTCATTTTGGCTCAGATGCCAATTTGCTGGGTGCCCCTGTGGTGAGTCATGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317477.8
ENST00000371153.9
CDS-3UTR TCA 90 bp GGAGGAGTCCAGAGAAGAAGGCTTTTGTTCCCCACGGCCAGTTCTTCTGCAGCCGTCTGTAAAACTTGTTaGAGGTTCTTGGCGAGCTGC +
Preference number: 4 (lower is better)
Translates to: GGVQRRRLLFPTASSSAAVCKTC*RFLASC
Trigger: GCAGCTCGCCAAGAACCTTCAACAAGTTTTACAGAC...GGCTGCAGAAGAACTGGCCGTGGGGAACAAAAGCCTTCTTCTCTGGACTCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354381.3
ENST00000371153.9
CDS-3UTR TCA 90 bp TGGCCTGTGACCTCTGCCCTCTTCAAGGGCGAGGGAGGAGTCCAGAGAAGAAGGTTAACCCCAACAAACTaGAGGTTCTTTTTGGTCCCA +
Preference number: 4 (lower is better)
Translates to: WPVTSALFKGEGGVQRRRLTPTN*RFFLVP
Trigger: TGGGACCAAAAAGAACCTTCAGTTTGTTGGGGTTAA...CCTTCTTCTCTGGACTCCTCCCTCGCCCTTGAAGAGGGCAGAGGTCACAGGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR TCA 90 bp GGTGCTTGTTCAGTTTCACCAGTCTGCACGGTGATTCTTCTAGGGTCCCCTACACCTGGGAGAGGGAGGTaGTTTGGAACCTTCACCACA +
Preference number: 4 (lower is better)
Translates to: GACSVSPVCTVILLGSPTPGRGR*FGTFTT
Trigger: TGTGGTGAAGGTTCCAAATCACCTCCCTCTCCCAGG...TGTAGGGGACCCTAGAAGAATCACCGTGCAGACTGGTGAAACTGAACAAGCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS-3UTR TCA 90 bp CAACCCCATCGAAACAAAGCTCCCAAATGGTGCTTGTTCAGTTTCACCAGTCTGGCTGGAGAGCAGTTCTaGCCTGTGCCAGTTCCTCGG +
Preference number: 4 (lower is better)
Translates to: QPHRNKAPKWCLFSFTSLAGEQF*PVPVPR
Trigger: CCGAGGAACTGGCACAGGTCAGAACTGCTCTCCAGC...CAGACTGGTGAAACTGAACAAGCACCATTTGGGAGCTTTGTTTCGATGGGGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS-3UTR TCA 90 bp GCCCGTGTAGTTTTCAGGCTTGGCCTAAGGCAAAAACTACAAAGCATCCTAATGACGATCTCGGCTCACTaGAACCTCCGCCTCCCGGGT +
Preference number: 4 (lower is better)
Translates to: ARVVFRLGLRQKLQSILMTISAH*NLRLPG
Trigger: ACCCGGGAGGCGGAGGTTTCAGTGAGCCGAGATCGT...CATTAGGATGCTTTGTAGTTTTTGCCTTAGGCCAAGCCTGAAAACTACACGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS-3UTR TCA 90 bp TGTGCTGGCCCCAGGGAATATGGAAGCTTCGGAAGGTATTGCTCTGCCCTGCCTTGTGTTCTGGGACTCTaGGCCTCTCTTATGAATCAC +
Preference number: 4 (lower is better)
Translates to: CAGPREYGSFGRYCSALPCVLGL*ASLMNH
Trigger: GTGATTCATAAGAGAGGCTCAGAGTCCCAGAACACA...AGGCAGGGCAGAGCAATACCTTCCGAAGCTTCCATATTCCCTGGGGCCAGCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS-3UTR TCA 90 bp TTCAAGGGCGAGGGAGGAGTCCAGAGAAGAAGGCTTTTGTTCCCCACGGCCAGTCATTCTCTCCACCTCTaGGTTGCATCAACACATGTC +
Preference number: 4 (lower is better)
Translates to: FKGEGGVQRRRLLFPTASHSLHL*VASTHV
Trigger: GACATGTGTTGATGCAACTCAGAGGTGGAGAGAATG...ACTGGCCGTGGGGAACAAAAGCCTTCTTCTCTGGACTCCTCCCTCGCCCTTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS-3UTR TCA 90 bp GGAGGAGTCCAGAGAAGAAGGCTTTTGTTCCCCACGGCCAGTTCTTCTGCAGCCCATCACAGGTTAGAATaGTCTTGGGGATGCATGGGA +
Preference number: 4 (lower is better)
Translates to: GGVQRRRLLFPTASSSAAHHRLE*SWGCMG
Trigger: TCCCATGCATCCCCAAGATCATTCTAACCTGTGATG...GGCTGCAGAAGAACTGGCCGTGGGGAACAAAAGCCTTCTTCTCTGGACTCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371150.5
CDS-3UTR GCA 90 bp CAAAGTGCTTCTTCTACCCTGTCAGATTTTAAGATTTCTCTGTCAACCCCATCGGTCGCAGGCTGGGTGTaGCAGGAGCAGCCGCACCAG +
Preference number: 4 (lower is better)
Translates to: QSASSTLSDFKISLSTPSVAGWV*QEQPHQ
Trigger: CTGGTGCGGCTGCTCCTGGCACACCCAGCCTGCGAC...CGATGGGGTTGACAGAGAAATCTTAAAATCTGACAGGGTAGAAGAAGCACTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR GCA 90 bp GCCCGTGTAGTTTTCAGGCTTGGCCTAAGGCAAAAACTACAAAGCATCCTAATGCACGGCCAGTTCTTCTaGAGCCCCTACAGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: ARVVFRLGLRQKLQSILMHGQFF*SPYSPR
Trigger: CCTGGGGCTGTAGGGGCTGCAGAAGAACTGGCCGTG...CATTAGGATGCTTTGTAGTTTTTGCCTTAGGCCAAGCCTGAAAACTACACGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR GCA 90 bp CCCCTCACCTTGCACCTTGAACCCTGCTCTGAAGCCCGTGTAGTTTTCAGGCTTGTGCTCCTGCCTGCCTaGTTGCTACACAATGTTACA +
Preference number: 4 (lower is better)
Translates to: PLTLHLEPCSEARVVFRLVLLPA*LLHNVT
Trigger: TGTAACATTGTGTAGCAAGCAGGCAGGCAGGAGCAC...AAGCCTGAAAACTACACGGGCTTCAGAGCAGGGTTCAAGGTGCAAGGTGAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR GCA 90 bp TTTGGATGTTTGGATGACACCGACGTACCCCTCACCTTGCACCTTGAACCCTGCGTGCTAATGTGCTCCTaGCTGCCTGCTTGCTACACA +
Preference number: 4 (lower is better)
Translates to: FGCLDDTDVPLTLHLEPCVLMCS*LPACYT
Trigger: TGTGTAGCAAGCAGGCAGGCAGGAGCACATTAGCAC...GCAGGGTTCAAGGTGCAAGGTGAGGGGTACGTCGGTGTCATCCAAACATCCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR GCA 90 bp TTCAAGGGCGAGGGAGGAGTCCAGAGAAGAAGGCTTTTGTTCCCCACGGCCAGTTCAGTTTCACCAGTCTaGACGGTGATTCTTCTAGGG +
Preference number: 4 (lower is better)
Translates to: FKGEGGVQRRRLLFPTASSVSPV*TVILLG
Trigger: CCCTAGAAGAATCACCGTGCAGACTGGTGAAACTGA...ACTGGCCGTGGGGAACAAAAGCCTTCTTCTCTGGACTCCTCCCTCGCCCTTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR GCA 90 bp GAAACAAAGCTCCCAAATGGTGCTTGTTCAGTTTCACCAGTCTGCACGGTGATTAGGTTCTTGGCGAGCTaGGGAAGTCCTGCGCGAGGC +
Preference number: 4 (lower is better)
Translates to: ETKLPNGACSVSPVCTVIRFLAS*GSPARG
Trigger: GCCTCGCGCAGGACTTCCGCAGCTCGCCAAGAACCT...AATCACCGTGCAGACTGGTGAAACTGAACAAGCACCATTTGGGAGCTTTGTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354381.3
ENST00000371153.9
CDS-3UTR GCA 90 bp CCCCTCACCTTGCACCTTGAACCCTGCTCTGAAGCCCGTGTAGTTTTCAGGCTTGGTCCCATTACCTCCTaGACGGAAGCCATAGTCTTT +
Preference number: 4 (lower is better)
Translates to: PLTLHLEPCSEARVVFRLGPITS*TEAIVF
Trigger: AAAGACTATGGCTTCCGTGCAGGAGGTAATGGGACC...AAGCCTGAAAACTACACGGGCTTCAGAGCAGGGTTCAAGGTGCAAGGTGAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR GCA 90 bp TTGCTCTGCCCTGCCTGGGTCCCTTGCTCCTATTGCAGCCAGAAGTCCCAAAAAACCTGCCAATCCTTCTaGAGGTTCAAAGGTGCCATC +
Preference number: 4 (lower is better)
Translates to: LLCPAWVPCSYCSQKSQKTCQSF*RFKGAI
Trigger: GATGGCACCTTTGAACCTGCAGAAGGATTGGCAGGT...TTTTTGGGACTTCTGGCTGCAATAGGAGCAAGGGACCCAGGCAGGGCAGAGCAA
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS-3UTR GCA 90 bp TGCCCTCTTCAAGGGCGAGGGAGGAGTCCAGAGAAGAAGGCTTTTGTTCCCCACTTTGAGACAGAGTTTTaGTCGTTACCCAGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: CPLQGRGRSPEKKAFVPHFETEF*SLPRLE
Trigger: CTCCAGCCTGGGTAACGAGCAAAACTCTGTCTCAAA...GTGGGGAACAAAAGCCTTCTTCTCTGGACTCCTCCCTCGCCCTTGAAGAGGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS-3UTR GCA 90 bp TTTGGATGTTTGGATGACACCGACGTACCCCTCACCTTGCACCTTGAACCCTGCACTCGCATGCTGCCCTaGAAAGCAAAACGTGGTTCC +
Preference number: 4 (lower is better)
Translates to: FGCLDDTDVPLTLHLEPCTRMLP*KAKRGS
Trigger: GGAACCACGTTTTGCTTTGCAGGGCAGCATGCGAGT...GCAGGGTTCAAGGTGCAAGGTGAGGGGTACGTCGGTGTCATCCAAACATCCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371150.5
CDS-3UTR GCA 90 bp CTTCAAGGGCGAGGGAGGAGTCCAGAGAAGAAGGCTTTTGTTCCCCACGGCCAGGCAAAACCAGGATATTaGTTTGAGGGGACAAGGGTT +
Preference number: 4 (lower is better)
Translates to: LQGRGRSPEKKAFVPHGQAKPGY*FEGTRV
Trigger: AACCCTTGTCCCCTCAAAGCAATATCCTGGTTTTGC...CTGGCCGTGGGGAACAAAAGCCTTCTTCTCTGGACTCCTCCCTCGCCCTTGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000371150.5
CDS-3UTR CCA 90 bp TTTCATGACTCACCACAGGGGCACCCAGCAAATTGGCATCTGAGCCAAAATGAGGAGCTCGGCATCCTCTaGCTCAGCAGCTTCCAACTG +
Preference number: 4 (lower is better)
Translates to: FHDSPQGHPANWHLSQNEELGIL*LSSFQL
Trigger: CAGTTGGAAGCTGCTGAGCCAGAGGATGCCGAGCTC...CTCATTTTGGCTCAGATGCCAATTTGCTGGGTGCCCCTGTGGTGAGTCATGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS-3UTR CCA 90 bp GGTGCTTGTTCAGTTTCACCAGTCTGCACGGTGATTCTTCTAGGGTCCCCTACAGATGCTCTCAAGAGCTaGGGCCGTCCACTCCCAAAA +
Preference number: 4 (lower is better)
Translates to: GACSVSPVCTVILLGSPTDALKS*GRPLPK
Trigger: TTTTGGGAGTGGACGGCCCCAGCTCTTGAGAGCATC...TGTAGGGGACCCTAGAAGAATCACCGTGCAGACTGGTGAAACTGAACAAGCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS-3UTR CCA 90 bp CTTCAAGGGCGAGGGAGGAGTCCAGAGAAGAAGGCTTTTGTTCCCCACGGCCAGACTACAAGCACATTCTaGAATGAGAAAGGAGGGCCT +
Preference number: 4 (lower is better)
Translates to: LQGRGRSPEKKAFVPHGQTTSTF*NEKGGP
Trigger: AGGCCCTCCTTTCTCATTCCAGAATGTGCTTGTAGT...CTGGCCGTGGGGAACAAAAGCCTTCTTCTCTGGACTCCTCCCTCGCCCTTGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS-3UTR CCA 90 bp AAGGATAGGCCAGAGGCTTGCTACTCAAAGTGTGGTTGTGGCTCGATAGCATCAGCTCATTCTCAGGGATaGGTGATGGCAGAGGTGGCG +
Preference number: 4 (lower is better)
Translates to: KDRPEACYSKCGCGSIASAHSQG*VMAEVA
Trigger: CGCCACCTCTGCCATCACCCATCCCTGAGAATGAGC...TGATGCTATCGAGCCACAACCACACTTTGAGTAGCAAGCCTCTGGCCTATCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS-3UTR CCA 90 bp TTCAGTTTCACCAGTCTGCACGGTGATTCTTCTAGGGTCCCCTACAGAATGCTTGTCCACCTCTACAGGTaGCGGGGGTGGAATCTCGCT +
Preference number: 4 (lower is better)
Translates to: FSFTSLHGDSSRVPYRMLVHLYR*RGWNLA
Trigger: AGCGAGATTCCACCCCCGCCACCTGTAGAGGTGGAC...AAGCATTCTGTAGGGGACCCTAGAAGAATCACCGTGCAGACTGGTGAAACTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS-3UTR CCA 90 bp GGAGGAGTCCAGAGAAGAAGGCTTTTGTTCCCCACGGCCAGTTCTTCTGCAGCCGCATCTCCCAGGACCTaGTTAGAAATGCAGAATCTC +
Preference number: 4 (lower is better)
Translates to: GGVQRRRLLFPTASSSAAASPRT*LEMQNL
Trigger: GAGATTCTGCATTTCTAACCAGGTCCTGGGAGATGC...GGCTGCAGAAGAACTGGCCGTGGGGAACAAAAGCCTTCTTCTCTGGACTCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS-3UTR CCA 90 bp GACACCGACGTACCCCTCACCTTGCACCTTGAACCCTGCTCTGAAGCCCGTGTAAAATGGAGTGTGGGCTaGCTTTCAACTCTCATTTGC +
Preference number: 4 (lower is better)
Translates to: DTDVPLTLHLEPCSEARVKWSVG*LSTLIC
Trigger: GCAAATGAGAGTTGAAAGCCAGCCCACACTCCATTT...TACACGGGCTTCAGAGCAGGGTTCAAGGTGCAAGGTGAGGGGTACGTCGGTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371150.5
3UTR CAA 72 bp TTTGGATGTTTGGATGACACCGACGTACCCCTCACCTaGCACCTTGAACCCTGCTCTGAAGCCCGTGTAGTT +
Preference number: 4 (lower is better)
Translates to: FGCLDDTDVPLT*HLEPCSEARVV
Trigger: AACTACACGGGCTTCAGAGCAGGGTTCAAGGTGCAAGGTGAGGGGTACGTCGGTGTCATCCAAACATCCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR TCA 90 bp CCCCTCACCTTGCACCTTGAACCCTGCTCTGAAGCCCGTGTAGTTTTCAGGCTTTGTGATCGGCCAAGTTaGCAAGCAGTTTCAGGAAGT +
Preference number: 4 (lower is better)
Translates to: PLTLHLEPCSEARVVFRLCDRPS*QAVSGS
Trigger: ACTTCCTGAAACTGCTTGTCAACTTGGCCGATCACA...AAGCCTGAAAACTACACGGGCTTCAGAGCAGGGTTCAAGGTGCAAGGTGAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR TCA 90 bp CAAAGTGCTTCTTCTACCCTGTCAGATTTTAAGATTTCTCTGTCAACCCCATCGCCTCCCTGTCGTGGCTaGCTCCCAGCATCAGCGCAG +
Preference number: 4 (lower is better)
Translates to: QSASSTLSDFKISLSTPSPPCRG*LPASAQ
Trigger: CTGCGCTGATGCTGGGAGTCAGCCACGACAGGGAGG...CGATGGGGTTGACAGAGAAATCTTAAAATCTGACAGGGTAGAAGAAGCACTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR TCA 90 bp TGGATGACACCGACGTACCCCTCACCTTGCACCTTGAACCCTGCTCTGAAGCCCATTGGAGCCACTAGATaGCTCAGAAATAGTCAAGAC +
Preference number: 4 (lower is better)
Translates to: WMTPTYPSPCTLNPALKPIGATR*LRNSQD
Trigger: GTCTTGACTATTTCTGAGTCATCTAGTGGCTCCAAT...GGGCTTCAGAGCAGGGTTCAAGGTGCAAGGTGAGGGGTACGTCGGTGTCATCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR TCA 90 bp TTGCTCTGCCCTGCCTGGGTCCCTTGCTCCTATTGCAGCCAGAAGTCCCAAAAACACCGGGAATTACCATaGGGTAATGGATACGGCTAT +
Preference number: 4 (lower is better)
Translates to: LLCPAWVPCSYCSQKSQKHRELP*GNGYGY
Trigger: ATAGCCGTATCCATTACCTCATGGTAATTCCCGGTG...TTTTTGGGACTTCTGGCTGCAATAGGAGCAAGGGACCCAGGCAGGGCAGAGCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317477.8
ENST00000371153.9
CDS-3UTR GCA 90 bp AAAGTGCTTCTTCTACCCTGTCAGATTTTAAGATTTCTCTGTCAACCCCATCGAGTCGCAGGCTGGGTGTaGCAGGAGCAGCCGCACCAG +
Preference number: 4 (lower is better)
Translates to: KVLLLPCQILRFLCQPHRVAGWV*QEQPHQ
Trigger: CTGGTGCGGCTGCTCCTGGCACACCCAGCCTGCGAC...TCGATGGGGTTGACAGAGAAATCTTAAAATCTGACAGGGTAGAAGAAGCACTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR GCA 90 bp AAGGATAGGCCAGAGGCTTGCTACTCAAAGTGTGGTTGTGGCTCGATAGCATCAACGTACCCCTCACCTTaGACCTTGAACCCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: KDRPEACYSKCGCGSIASTYPSP*TLNPAL
Trigger: CAGAGCAGGGTTCAAGGTGCAAGGTGAGGGGTACGT...TGATGCTATCGAGCCACAACCACACTTTGAGTAGCAAGCCTCTGGCCTATCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS-3UTR GCA 90 bp TTTGGATGTTTGGATGACACCGACGTACCCCTCACCTTGCACCTTGAACCCTGCTCCTGCCTGCCTGCTTaGTACACAATGTTACAGAGG +
Preference number: 4 (lower is better)
Translates to: FGCLDDTDVPLTLHLEPCSCLPA*YTMLQR
Trigger: CCTCTGTAACATTGTGTAGCAAGCAGGCAGGCAGGA...GCAGGGTTCAAGGTGCAAGGTGAGGGGTACGTCGGTGTCATCCAAACATCCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR GCA 90 bp GGAGGAGTCCAGAGAAGAAGGCTTTTGTTCCCCACGGCCAGTTCTTCTGCAGCCGCATTGATGCCAAAGTaGTTCTTCTACCCTGTCAGA +
Preference number: 4 (lower is better)
Translates to: GGVQRRRLLFPTASSSAAALMPK*FFYPVR
Trigger: TCTGACAGGGTAGAAGAAGCACTTTGGCATCAATGC...GGCTGCAGAAGAACTGGCCGTGGGGAACAAAAGCCTTCTTCTCTGGACTCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR GCA 90 bp TGCCAAAGTGCTTCTTCTACCCTGTCAGATTTTAAGATTTCTCTGTCAACCCCACCCTCAGGGATGCCCTaGCCAGCCTCGCAGGTGAGA +
Preference number: 4 (lower is better)
Translates to: CQSASSTLSDFKISLSTPPSGMP*PASQVR
Trigger: TCTCACCTGCGAGGCTGGGCAGGGCATCCCTGAGGG...TGGGGTTGACAGAGAAATCTTAAAATCTGACAGGGTAGAAGAAGCACTTTGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR GCA 90 bp CAACCCCATCGAAACAAAGCTCCCAAATGGTGCTTGTTCAGTTTCACCAGTCTGCCAGTTTCTGGCAGATaGTGGCTCAGTGCCCGGCAT +
Preference number: 4 (lower is better)
Translates to: QPHRNKAPKWCLFSFTSLPVSGR*WLSARH
Trigger: ATGCCGGGCACTGAGCCAGCATCTGCCAGAAACTGG...CAGACTGGTGAAACTGAACAAGCACCATTTGGGAGCTTTGTTTCGATGGGGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR GCA 90 bp AAGTATTGCTTTTCTAATGTGCTAATGTGCTCCTGCCTGCCTGCTTGCTACACAGCTCCTCAGAAGCCCTaGTGTGCAGCAGCGTGGCAG +
Preference number: 4 (lower is better)
Translates to: KYCFSNVLMCSCLPACYTAPQKP*CAAAWQ
Trigger: CTGCCACGCTGCTGCACAGCAGGGCTTCTGAGGAGC...TGTGTAGCAAGCAGGCAGGCAGGAGCACATTAGCACATTAGAAAAGCAATACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS-3UTR GCA 90 bp GAACAGATATTTGCTTCTAGGGGATATGAGGGGAAAGCACCGGGAATTACCATGGAGGAGGTAAGGACCTaGTCGGGTCCCTGTGGCAGT +
Preference number: 4 (lower is better)
Translates to: EQIFASRGYEGKAPGITMEEVRT*SGPCGS
Trigger: ACTGCCACAGGGACCCGAGCAGGTCCTTACCTCCTC...CATGGTAATTCCCGGTGCTTTCCCCTCATATCCCCTAGAAGCAAATATCTGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS-3UTR GCA 90 bp TTCAAGGGCGAGGGAGGAGTCCAGAGAAGAAGGCTTTTGTTCCCCACGGCCAGTTTCCTGTTCAGTGCCTaGTTCTTCAATCCTGAGTTC +
Preference number: 4 (lower is better)
Translates to: FKGEGGVQRRRLLFPTASFLFSA*FFNPEF
Trigger: GAACTCAGGATTGAAGAAGCAGGCACTGAACAGGAA...ACTGGCCGTGGGGAACAAAAGCCTTCTTCTCTGGACTCCTCCCTCGCCCTTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS-3UTR CCA 90 bp GCTAATGTGCTCCTGCCTGCCTGCTTGCTACACAATGTTACAGAGGGTAGAGTCCAGCCATGTCTTCATTaGTCTCTGCGGAAGCCAAGG +
Preference number: 4 (lower is better)
Translates to: ANVLLPACLLHNVTEGRVQPCLH*SLRKPR
Trigger: CCTTGGCTTCCGCAGAGACCAATGAAGACATGGCTG...GACTCTACCCTCTGTAACATTGTGTAGCAAGCAGGCAGGCAGGAGCACATTAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CCA 90 bp GCTAATGTGCTCCTGCCTGCCTGCTTGCTACACAATGTTACAGAGGGTAGAGTCGCCGAGGATCCATCGTaGTCCTGCAGATTGACATCT +
Preference number: 4 (lower is better)
Translates to: ANVLLPACLLHNVTEGRVAEDPS*SCRLTS
Trigger: AGATGTCAATCTGCAGGACCACGATGGATCCTCGGC...GACTCTACCCTCTGTAACATTGTGTAGCAAGCAGGCAGGCAGGAGCACATTAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CCA 90 bp TTTCATGACTCACCACAGGGGCACCCAGCAAATTGGCATCTGAGCCAAAATGAGGTGACTTCAGAGCGATaGACAAAGCTGTGCGGCCAG +
Preference number: 4 (lower is better)
Translates to: FHDSPQGHPANWHLSQNEVTSER*TKLCGQ
Trigger: CTGGCCGCACAGCTTTGTCCATCGCTCTGAAGTCAC...CTCATTTTGGCTCAGATGCCAATTTGCTGGGTGCCCCTGTGGTGAGTCATGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317477.8
ENST00000371153.9
CDS-3UTR CCA 90 bp CCCCTCACCTTGCACCTTGAACCCTGCTCTGAAGCCCGTGTAGTTTTCAGGCTTGATGTTTTGGATGTTTaGATGACACCGACGTACCCC +
Preference number: 4 (lower is better)
Translates to: PLTLHLEPCSEARVVFRLDVLDV*MTPTYP
Trigger: GGGGTACGTCGGTGTCATCCAAACATCCAAAACATC...AAGCCTGAAAACTACACGGGCTTCAGAGCAGGGTTCAAGGTGCAAGGTGAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CCA 90 bp GCTCCCAAATGGTGCTTGTTCAGTTTCACCAGTCTGCACGGTGATTCTTCTAGGTGCTTGCCAGGGGGTTaGCTTAAATCCCCTCCCATC +
Preference number: 4 (lower is better)
Translates to: APKWCLFSFTSLHGDSSRCLPGG*LKSPPI
Trigger: GATGGGAGGGGATTTAAGCCAACCCCCTGGCAAGCA...CCTAGAAGAATCACCGTGCAGACTGGTGAAACTGAACAAGCACCATTTGGGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CCA 90 bp TGGATGACACCGACGTACCCCTCACCTTGCACCTTGAACCCTGCTCTGAAGCCCATACGGCTATGCAGGTaGCTTCTTGATGACAATAAC +
Preference number: 4 (lower is better)
Translates to: WMTPTYPSPCTLNPALKPIRLCR*LLDDNN
Trigger: GTTATTGTCATCAAGAAGCCACCTGCATAGCCGTAT...GGGCTTCAGAGCAGGGTTCAAGGTGCAAGGTGAGGGGTACGTCGGTGTCATCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317477.8
ENST00000371153.9
CDS-3UTR CCA 90 bp TGCCCTCTTCAAGGGCGAGGGAGGAGTCCAGAGAAGAAGGCTTTTGTTCCCCACACTGAAGGTTCTTTTTaGTCCCATTACCTCCTGCAC +
Preference number: 4 (lower is better)
Translates to: CPLQGRGRSPEKKAFVPHTEGSF*SHYLLH
Trigger: GTGCAGGAGGTAATGGGACCAAAAAGAACCTTCAGT...GTGGGGAACAAAAGCCTTCTTCTCTGGACTCCTCCCTCGCCCTTGAAGAGGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CCA 90 bp ACCAGTCTGCACGGTGATTCTTCTAGGGTCCCCTACAGAATGCTTGCCAGGGGGACTGAAGGTTCTTTTTaGTCCCATTACCTCCTGCAC +
Preference number: 4 (lower is better)
Translates to: TSLHGDSSRVPYRMLARGTEGSF*SHYLLH
Trigger: GTGCAGGAGGTAATGGGACCAAAAAGAACCTTCAGT...CCCCCTGGCAAGCATTCTGTAGGGGACCCTAGAAGAATCACCGTGCAGACTGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CCA 90 bp CAACCCCATCGAAACAAAGCTCCCAAATGGTGCTTGTTCAGTTTCACCAGTCTGGTCAGACAAGTCCTCTaGGGTGCTGTCCTCACCGCT +
Preference number: 4 (lower is better)
Translates to: QPHRNKAPKWCLFSFTSLVRQVL*GAVLTA
Trigger: AGCGGTGAGGACAGCACCCCAGAGGACTTGTCTGAC...CAGACTGGTGAAACTGAACAAGCACCATTTGGGAGCTTTGTTTCGATGGGGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CCA 90 bp GCTCCCAAATGGTGCTTGTTCAGTTTCACCAGTCTGCACGGTGATTCTTCTAGGCTTCCAACTGTCTGGTaGCCTCTGCCAACAGAGCCT +
Preference number: 4 (lower is better)
Translates to: APKWCLFSFTSLHGDSSRLPTVW*PLPTEP
Trigger: AGGCTCTGTTGGCAGAGGCCACCAGACAGTTGGAAG...CCTAGAAGAATCACCGTGCAGACTGGTGAAACTGAACAAGCACCATTTGGGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS-3UTR CCA 90 bp GCTCCCAAATGGTGCTTGTTCAGTTTCACCAGTCTGCACGGTGATTCTTCTAGGCAGCTTCCAACTGTCTaGTGGCCTCTGCCAACAGAG +
Preference number: 4 (lower is better)
Translates to: APKWCLFSFTSLHGDSSRQLPTV*WPLPTE
Trigger: CTCTGTTGGCAGAGGCCACCAGACAGTTGGAAGCTG...CCTAGAAGAATCACCGTGCAGACTGGTGAAACTGAACAAGCACCATTTGGGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS-3UTR CCA 90 bp TCTGAGTTGCATCAACACATGTCATTGTGTTCTGGGACTCTGAGCCTCTCTTATCGTTGGCGAGCTTGGTaGCCTTCCCGGGTGCTCCTT +
Preference number: 4 (lower is better)
Translates to: SELHQHMSLCSGTLSLSYRWRAW*PSRVLL
Trigger: AAGGAGCACCCGGGAAGGCCACCAAGCTCGCCAACG...ATAAGAGAGGCTCAGAGTCCCAGAACACAATGACATGTGTTGATGCAACTCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS-3UTR CCA 90 bp TGCCAAAGTGCTTCTTCTACCCTGTCAGATTTTAAGATTTCTCTGTCAACCCCACGGTGGCTCCTTGGGTaGGTGAGCCTGGGCCGAGTA +
Preference number: 4 (lower is better)
Translates to: CQSASSTLSDFKISLSTPRWLLG*VSLGRV
Trigger: TACTCGGCCCAGGCTCACCCACCCAAGGAGCCACCG...TGGGGTTGACAGAGAAATCTTAAAATCTGACAGGGTAGAAGAAGCACTTTGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS-3UTR CCA 90 bp GGTGCTTGTTCAGTTTCACCAGTCTGCACGGTGATTCTTCTAGGGTCCCCTACAGCAAGGCTTGGCAAATaGAGTGTGGGCTGGCTTTCA +
Preference number: 4 (lower is better)
Translates to: GACSVSPVCTVILLGSPTARLGK*SVGWLS
Trigger: TGAAAGCCAGCCCACACTCCATTTGCCAAGCCTTGC...TGTAGGGGACCCTAGAAGAATCACCGTGCAGACTGGTGAAACTGAACAAGCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371150.5
CDS-3UTR TCA 90 bp GCTAATGTGCTCCTGCCTGCCTGCTTGCTACACAATGTTACAGAGGGTAGAGTCGGAACCACTCTTGACTaGTGGTGTTCAAGCTTTGCC +
Preference number: 4 (lower is better)
Translates to: ANVLLPACLLHNVTEGRVGTTLD*WCSSFA
Trigger: GGCAAAGCTTGAACACCATCAGTCAAGAGTGGTTCC...GACTCTACCCTCTGTAACATTGTGTAGCAAGCAGGCAGGCAGGAGCACATTAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR TCA 90 bp AAGCTCCCAAATGGTGCTTGTTCAGTTTCACCAGTCTGCACGGTGATTCTTCTAGCCGTGTTCCCGTTGTaGTCGGCCAAGTTGACAAGC +
Preference number: 4 (lower is better)
Translates to: KLPNGACSVSPVCTVILLAVFPL*SAKLTS
Trigger: GCTTGTCAACTTGGCCGATCACAACGGGAACACGGC...TAGAAGAATCACCGTGCAGACTGGTGAAACTGAACAAGCACCATTTGGGAGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR TCA 90 bp GCCCGTGTAGTTTTCAGGCTTGGCCTAAGGCAAAAACTACAAAGCATCCTAATGGCCGTGTTCCCGTTGTaGTCGGCCAAGTTGACAAGC +
Preference number: 4 (lower is better)
Translates to: ARVVFRLGLRQKLQSILMAVFPL*SAKLTS
Trigger: GCTTGTCAACTTGGCCGATCACAACGGGAACACGGC...CATTAGGATGCTTTGTAGTTTTTGCCTTAGGCCAAGCCTGAAAACTACACGGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR TCA 90 bp GCCAAAGTGCTTCTTCTACCCTGTCAGATTTTAAGATTTCTCTGTCAACCCCATTCCACGTTGCCATGGTaGCAGGCCACCATGAGGGCC +
Preference number: 4 (lower is better)
Translates to: AKVLLLPCQILRFLCQPHSTLPW*QATMRA
Trigger: GGCCCTCATGGTGGCCTGTCACCATGGCAACGTGGA...ATGGGGTTGACAGAGAAATCTTAAAATCTGACAGGGTAGAAGAAGCACTTTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR TCA 90 bp CCAGTCTGCACGGTGATTCTTCTAGGGTCCCCTACAGAATGCTTGCCAGGGGGTATTGGAGCCACTAGATaGCTCAGAAATAGTCAAGAC +
Preference number: 4 (lower is better)
Translates to: PVCTVILLGSPTECLPGGIGATR*LRNSQD
Trigger: GTCTTGACTATTTCTGAGTCATCTAGTGGCTCCAAT...ACCCCCTGGCAAGCATTCTGTAGGGGACCCTAGAAGAATCACCGTGCAGACTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR TCA 90 bp GTATTGCTCTGCCCTGCCTGGGTCCCTTGCTCCTATTGCAGCCAGAAGTCCCAATCAGATGACTTCACGTaGGCTACTGACCATATAAAC +
Preference number: 4 (lower is better)
Translates to: VLLCPAWVPCSYCSQKSQSDDFT*ATDHIN
Trigger: GTTTATATGGTCAGTAGCTCACGTGAAGTCATCTGA...TTGGGACTTCTGGCTGCAATAGGAGCAAGGGACCCAGGCAGGGCAGAGCAATAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317477.8
ENST00000371153.9
CDS-3UTR TCA 90 bp GAAACAAAGCTCCCAAATGGTGCTTGTTCAGTTTCACCAGTCTGCACGGTGATTGCTGGTCTCCTCACTTaGGGTGGTCTCATACCCACC +
Preference number: 4 (lower is better)
Translates to: ETKLPNGACSVSPVCTVIAGLLT*GGLIPT
Trigger: GGTGGGTATGAGACCACCTCAAGTGAGGAGACCAGC...AATCACCGTGCAGACTGGTGAAACTGAACAAGCACCATTTGGGAGCTTTGTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR TCA 90 bp AACAAAGCTCCCAAATGGTGCTTGTTCAGTTTCACCAGTCTGCACGGTGATTCTGCTGGTCTCCTCACTTaGGGTGGTCTCATACCCACC +
Preference number: 4 (lower is better)
Translates to: NKAPKWCLFSFTSLHGDSAGLLT*GGLIPT
Trigger: GGTGGGTATGAGACCACCTCAAGTGAGGAGACCAGC...AGAATCACCGTGCAGACTGGTGAAACTGAACAAGCACCATTTGGGAGCTTTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR TCA 90 bp AAGCTCCCAAATGGTGCTTGTTCAGTTTCACCAGTCTGCACGGTGATTCTTCTACTCTGGAATCCGAGTTaGTGCTCGTGGGCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: KLPNGACSVSPVCTVILLLWNPS*CSWAGA
Trigger: AGCTCCAGCCCACGAGCATCAACTCGGATTCCAGAG...TAGAAGAATCACCGTGCAGACTGGTGAAACTGAACAAGCACCATTTGGGAGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS-3UTR TCA 90 bp CCCCTCACCTTGCACCTTGAACCCTGCTCTGAAGCCCGTGTAGTTTTCAGGCTTTTTCCTCAGTTACCCTaGTGCCAATGCTTCTCATGT +
Preference number: 4 (lower is better)
Translates to: PLTLHLEPCSEARVVFRLFPQLP*CQCFSC
Trigger: ACATGAGAAGCATTGGCATCAGGGTAACTGAGGAAA...AAGCCTGAAAACTACACGGGCTTCAGAGCAGGGTTCAAGGTGCAAGGTGAGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS-3UTR TCA 90 bp GACACCGACGTACCCCTCACCTTGCACCTTGAACCCTGCTCTGAAGCCCGTGTATCTGAGCCTCTCTTATaGATCACAATGGCAAAAGAA +
Preference number: 4 (lower is better)
Translates to: DTDVPLTLHLEPCSEARVSEPLL*ITMAKE
Trigger: TTCTTTTGCCATTGTGATTCATAAGAGAGGCTCAGA...TACACGGGCTTCAGAGCAGGGTTCAAGGTGCAAGGTGAGGGGTACGTCGGTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS-3UTR TCA 90 bp TTCAAGGGCGAGGGAGGAGTCCAGAGAAGAAGGCTTTTGTTCCCCACGGCCAGTACAGTGAAGAGGGTTTaGTCTGTTACAACAGGAAGT +
Preference number: 4 (lower is better)
Translates to: FKGEGGVQRRRLLFPTASTVKRV*SVTTGS
Trigger: ACTTCCTGTTGTAACAGATCAAACCCTCTTCACTGT...ACTGGCCGTGGGGAACAAAAGCCTTCTTCTCTGGACTCCTCCCTCGCCCTTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371150.5
CDS-3UTR GCA 90 bp GCCAAAGTGCTTCTTCTACCCTGTCAGATTTTAAGATTTCTCTGTCAACCCCATCTGGCCTGTGACCTCTaGCCTCTTCAAGGGCGAGGG +
Preference number: 4 (lower is better)
Translates to: AKVLLLPCQILRFLCQPHLACDL*PLQGRG
Trigger: CCCTCGCCCTTGAAGAGGGCAGAGGTCACAGGCCAG...ATGGGGTTGACAGAGAAATCTTAAAATCTGACAGGGTAGAAGAAGCACTTTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR GCA 90 bp GGTGCTTGTTCAGTTTCACCAGTCTGCACGGTGATTCTTCTAGGGTCCCCTACATCCTGCCTGCCTGCTTaGTACACAATGTTACAGAGG +
Preference number: 4 (lower is better)
Translates to: GACSVSPVCTVILLGSPTSCLPA*YTMLQR
Trigger: CCTCTGTAACATTGTGTAGCAAGCAGGCAGGCAGGA...TGTAGGGGACCCTAGAAGAATCACCGTGCAGACTGGTGAAACTGAACAAGCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR GCA 90 bp AAGCTCCCAAATGGTGCTTGTTCAGTTTCACCAGTCTGCACGGTGATTCTTCTACCTGCCTGGGTCCCTTaGTCCTATTGCAGCCAGAAG +
Preference number: 4 (lower is better)
Translates to: KLPNGACSVSPVCTVILLPAWVP*SYCSQK
Trigger: CTTCTGGCTGCAATAGGAGCAAGGGACCCAGGCAGG...TAGAAGAATCACCGTGCAGACTGGTGAAACTGAACAAGCACCATTTGGGAGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317477.8
ENST00000371153.9
CDS-3UTR GCA 90 bp GGTGCTTGTTCAGTTTCACCAGTCTGCACGGTGATTCTTCTAGGGTCCCCTACAGGTCCCATTACCTCCTaGACGGAAGCCATAGTCTTT +
Preference number: 4 (lower is better)
Translates to: GACSVSPVCTVILLGSPTGPITS*TEAIVF
Trigger: AAAGACTATGGCTTCCGTGCAGGAGGTAATGGGACC...TGTAGGGGACCCTAGAAGAATCACCGTGCAGACTGGTGAAACTGAACAAGCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR GCA 90 bp GCTAATGTGCTCCTGCCTGCCTGCTTGCTACACAATGTTACAGAGGGTAGAGTCGTCACACTTCTTCTCTaGCTCGCTGTCAGACAAGTC +
Preference number: 4 (lower is better)
Translates to: ANVLLPACLLHNVTEGRVVTLLL*LAVRQV
Trigger: GACTTGTCTGACAGCGAGGCAGAGAAGAAGTGTGAC...GACTCTACCCTCTGTAACATTGTGTAGCAAGCAGGCAGGCAGGAGCACATTAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR GCA 90 bp GCCCGTGTAGTTTTCAGGCTTGGCCTAAGGCAAAAACTACAAAGCATCCTAATGCTGTCTGGTGGCCTCTaGCAACAGAGCCTTCCTGTG +
Preference number: 4 (lower is better)
Translates to: ARVVFRLGLRQKLQSILMLSGGL*QQSLPV
Trigger: CACAGGAAGGCTCTGTTGGCAGAGGCCACCAGACAG...CATTAGGATGCTTTGTAGTTTTTGCCTTAGGCCAAGCCTGAAAACTACACGGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS-3UTR GCA 90 bp AACAAAGCTCCCAAATGGTGCTTGTTCAGTTTCACCAGTCTGCACGGTGATTCTGCAGCGTGGCAGGCATaGTGGATGCTCTCAAGAGCT +
Preference number: 4 (lower is better)
Translates to: NKAPKWCLFSFTSLHGDSAAWQA*WMLSRA
Trigger: AGCTCTTGAGAGCATCCAGCATGCCTGCCACGCTGC...AGAATCACCGTGCAGACTGGTGAAACTGAACAAGCACCATTTGGGAGCTTTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS-3UTR GCA 90 bp ACCAGTCTGCACGGTGATTCTTCTAGGGTCCCCTACAGAATGCTTGCCAGGGGGATCTTCTTCACATACTaGCCAATAGTGGCATCCGTT +
Preference number: 4 (lower is better)
Translates to: TSLHGDSSRVPYRMLARGIFFTY*PIVASV
Trigger: AACGGATGCCACTATTGGGCAGTATGTGAAGAAGAT...CCCCCTGGCAAGCATTCTGTAGGGGACCCTAGAAGAATCACCGTGCAGACTGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS-3UTR GCA 90 bp CCCCTCACCTTGCACCTTGAACCCTGCTCTGAAGCCCGTGTAGTTTTCAGGCTTCCCAGACACTGCCTTTaGACAATGCAAATGAGAACA +
Preference number: 4 (lower is better)
Translates to: PLTLHLEPCSEARVVFRLPRHCL*TMQMRT
Trigger: TGTTCTCATTTGCATTGTGCAAAGGCAGTGTCTGGG...AAGCCTGAAAACTACACGGGCTTCAGAGCAGGGTTCAAGGTGCAAGGTGAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371150.5
CDS-3UTR GCA 90 bp GGTGCTTGTTCAGTTTCACCAGTCTGCACGGTGATTCTTCTAGGGTCCCCTACACTTGGCCCCAGACACTaGCTTTGCACAATGCAAATG +
Preference number: 4 (lower is better)
Translates to: GACSVSPVCTVILLGSPTLGPRH*LCTMQM
Trigger: CATTTGCATTGTGCAAAGGCAGTGTCTGGGGCCAAG...TGTAGGGGACCCTAGAAGAATCACCGTGCAGACTGGTGAAACTGAACAAGCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371150.5
CDS-3UTR CCA 90 bp TTTGGATGTTTGGATGACACCGACGTACCCCTCACCTTGCACCTTGAACCCTGCGATGTTTTGGATGTTTaGATGACACCGACGTACCCC +
Preference number: 4 (lower is better)
Translates to: FGCLDDTDVPLTLHLEPCDVLDV*MTPTYP
Trigger: GGGGTACGTCGGTGTCATCCAAACATCCAAAACATC...GCAGGGTTCAAGGTGCAAGGTGAGGGGTACGTCGGTGTCATCCAAACATCCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CCA 90 bp TGCCCTCTTCAAGGGCGAGGGAGGAGTCCAGAGAAGAAGGCTTTTGTTCCCCACAACAAAGCTCCCAAATaGTGCTTGTTCAGTTTCACC +
Preference number: 4 (lower is better)
Translates to: CPLQGRGRSPEKKAFVPHNKAPK*CLFSFT
Trigger: GGTGAAACTGAACAAGCACCATTTGGGAGCTTTGTT...GTGGGGAACAAAAGCCTTCTTCTCTGGACTCCTCCCTCGCCCTTGAAGAGGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CCA 90 bp GAAACAAAGCTCCCAAATGGTGCTTGTTCAGTTTCACCAGTCTGCACGGTGATTTTGCTCTGCCCTGCCTaGGTCCCTTGCTCCTATTGC +
Preference number: 4 (lower is better)
Translates to: ETKLPNGACSVSPVCTVILLCPA*VPCSYC
Trigger: GCAATAGGAGCAAGGGACCCAGGCAGGGCAGAGCAA...AATCACCGTGCAGACTGGTGAAACTGAACAAGCACCATTTGGGAGCTTTGTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317477.8
ENST00000371153.9
CDS-3UTR CCA 90 bp AAGCTCCCAAATGGTGCTTGTTCAGTTTCACCAGTCTGCACGGTGATTCTTCTAGTCAGACAAGTCCTCTaGGGTGCTGTCCTCACCGCT +
Preference number: 4 (lower is better)
Translates to: KLPNGACSVSPVCTVILLVRQVL*GAVLTA
Trigger: AGCGGTGAGGACAGCACCCCAGAGGACTTGTCTGAC...TAGAAGAATCACCGTGCAGACTGGTGAAACTGAACAAGCACCATTTGGGAGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CCA 90 bp CAGGAATGTATGTGCATATTTGACATAGTTTCTTCTCTAGAAGGGTGGCTCTCTCCAGGCCCACTTTCCTaGGCAGCATGGCAGGTGCCC +
Preference number: 4 (lower is better)
Translates to: QECMCIFDIVSSLEGWLSPGPLS*AAWQVP
Trigger: GGGCACCTGCCATGCTGCCCAGGAAAGTGGGCCTGG...AGAGAGCCACCCTTCTAGAGAAGAAACTATGTCAAATATGCACATACATTCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CCA 90 bp GCCAAAGTGCTTCTTCTACCCTGTCAGATTTTAAGATTTCTCTGTCAACCCCATCTCTCGGCCTTGGAGTaGGGGACTTCTTCCCCAGGC +
Preference number: 4 (lower is better)
Translates to: AKVLLLPCQILRFLCQPHLSALE*GTSSPG
Trigger: GCCTGGGGAAGAAGTCCCCCACTCCAAGGCCGAGAG...ATGGGGTTGACAGAGAAATCTTAAAATCTGACAGGGTAGAAGAAGCACTTTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CCA 90 bp TTTCATGACTCACCACAGGGGCACCCAGCAAATTGGCATCTGAGCCAAAATGAGCTGGTCAAGAGTCCATaGACAGGGTCAGTGTTCACC +
Preference number: 4 (lower is better)
Translates to: FHDSPQGHPANWHLSQNELVKSP*TGSVFT
Trigger: GGTGAACACTGACCCTGTCCATGGACTCTTGACCAG...CTCATTTTGGCTCAGATGCCAATTTGCTGGGTGCCCCTGTGGTGAGTCATGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS-3UTR CCA 90 bp GCCCGTGTAGTTTTCAGGCTTGGCCTAAGGCAAAAACTACAAAGCATCCTAATGCCTTCCCTGGGAGATTaGAACTGGTCTCCTCCCTCC +
Preference number: 4 (lower is better)
Translates to: ARVVFRLGLRQKLQSILMPSLGD*NWSPPS
Trigger: GGAGGGAGGAGACCAGTTCCAATCTCCCAGGGAAGG...CATTAGGATGCTTTGTAGTTTTTGCCTTAGGCCAAGCCTGAAAACTACACGGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS-3UTR CCA 90 bp CCAGTCTGCACGGTGATTCTTCTAGGGTCCCCTACAGAATGCTTGCCAGGGGGTCGCTCGGCCACAAATTaGATTTTGAAACTTCCATCA +
Preference number: 4 (lower is better)
Translates to: PVCTVILLGSPTECLPGGRSATN*ILKLPS
Trigger: TGATGGAAGTTTCAAAATCCAATTTGTGGCCGAGCG...ACCCCCTGGCAAGCATTCTGTAGGGGACCCTAGAAGAATCACCGTGCAGACTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS-3UTR CCA 90 bp AAGCTCCCAAATGGTGCTTGTTCAGTTTCACCAGTCTGCACGGTGATTCTTCTACAGCAGGGCCATTCTTaGCCCCAGACACTGCCTTTG +
Preference number: 4 (lower is better)
Translates to: KLPNGACSVSPVCTVILLQQGHS*PQTLPL
Trigger: CAAAGGCAGTGTCTGGGGCCAAGAATGGCCCTGCTG...TAGAAGAATCACCGTGCAGACTGGTGAAACTGAACAAGCACCATTTGGGAGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371150.5
CDS-3UTR CCA 90 bp TTTGGATGTTTGGATGACACCGACGTACCCCTCACCTTGCACCTTGAACCCTGCCTGCAAAGCAAAACGTaGTTCCACTTTACCCGACAG +
Preference number: 4 (lower is better)
Translates to: FGCLDDTDVPLTLHLEPCLQSKT*FHFTRQ
Trigger: CTGTCGGGTAAAGTGGAACCACGTTTTGCTTTGCAG...GCAGGGTTCAAGGTGCAAGGTGAGGGGTACGTCGGTGTCATCCAAACATCCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371150.5
CDS-3UTR CCA 90 bp GCTCCCAAATGGTGCTTGTTCAGTTTCACCAGTCTGCACGGTGATTCTTCTAGGGTTTTGGGGACCTCTTaGAGGAGCCTTGCTTTCTGC +
Preference number: 4 (lower is better)
Translates to: APKWCLFSFTSLHGDSSRVLGTS*RSLAFC
Trigger: GCAGAAAGCAAGGCTCCTCCAAGAGGTCCCCAAAAC...CCTAGAAGAATCACCGTGCAGACTGGTGAAACTGAACAAGCACCATTTGGGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371150.5
CDS-3UTR TCA 90 bp GGTGCTTGTTCAGTTTCACCAGTCTGCACGGTGATTCTTCTAGGGTCCCCTACATGTGATCGGCCAAGTTaGCAAGCAGTTTCAGGAAGT +
Preference number: 4 (lower is better)
Translates to: GACSVSPVCTVILLGSPTCDRPS*QAVSGS
Trigger: ACTTCCTGAAACTGCTTGTCAACTTGGCCGATCACA...TGTAGGGGACCCTAGAAGAATCACCGTGCAGACTGGTGAAACTGAACAAGCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR TCA 90 bp GCCCGTGTAGTTTTCAGGCTTGGCCTAAGGCAAAAACTACAAAGCATCCTAATGCGGAAGCCAAGGGAGTaGTCATTACGGCAGTGTAGC +
Preference number: 4 (lower is better)
Translates to: ARVVFRLGLRQKLQSILMRKPRE*SLRQCS
Trigger: GCTACACTGCCGTAATGATCACTCCCTTGGCTTCCG...CATTAGGATGCTTTGTAGTTTTTGCCTTAGGCCAAGCCTGAAAACTACACGGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR TCA 90 bp GCTCCCAAATGGTGCTTGTTCAGTTTCACCAGTCTGCACGGTGATTCTTCTAGGTTTTGGATGTTTGGATaGCACCGACGTACCCCTCAC +
Preference number: 4 (lower is better)
Translates to: APKWCLFSFTSLHGDSSRFWMFG*HRRTPH
Trigger: GTGAGGGGTACGTCGGTGTCATCCAAACATCCAAAA...CCTAGAAGAATCACCGTGCAGACTGGTGAAACTGAACAAGCACCATTTGGGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR TCA 90 bp CCCCTCACCTTGCACCTTGAACCCTGCTCTGAAGCCCGTGTAGTTTTCAGGCTTTCAGATGACTTCACGTaGGCTACTGACCATATAAAC +
Preference number: 4 (lower is better)
Translates to: PLTLHLEPCSEARVVFRLSDDFT*ATDHIN
Trigger: GTTTATATGGTCAGTAGCTCACGTGAAGTCATCTGA...AAGCCTGAAAACTACACGGGCTTCAGAGCAGGGTTCAAGGTGCAAGGTGAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317477.8
ENST00000371153.9
CDS-3UTR TCA 90 bp GCTAATGTGCTCCTGCCTGCCTGCTTGCTACACAATGTTACAGAGGGTAGAGTCAAGTCCAGGTCTAAATaGAAGCCATATGGGGTCTCC +
Preference number: 4 (lower is better)
Translates to: ANVLLPACLLHNVTEGRVKSRSK*KPYGVS
Trigger: GGAGACCCCATATGGCTTTCATTTAGACCTGGACTT...GACTCTACCCTCTGTAACATTGTGTAGCAAGCAGGCAGGCAGGAGCACATTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS-3UTR TCA 90 bp TTTCATGACTCACCACAGGGGCACCCAGCAAATTGGCATCTGAGCCAAAATGAGCTGCTTCTTCAATCCTaGGTTCAGTGGAGAGGAAGC +
Preference number: 4 (lower is better)
Translates to: FHDSPQGHPANWHLSQNELLLQS*VQWRGS
Trigger: GCTTCCTCTCCACTGAACTCAGGATTGAAGAAGCAG...CTCATTTTGGCTCAGATGCCAATTTGCTGGGTGCCCCTGTGGTGAGTCATGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS-3UTR TCA 90 bp GCTCCCAAATGGTGCTTGTTCAGTTTCACCAGTCTGCACGGTGATTCTTCTAGGTTTGCACAATGCAAATaGGAACAGCCCCCTCTGGGT +
Preference number: 4 (lower is better)
Translates to: APKWCLFSFTSLHGDSSRFAQCK*EQPPLG
Trigger: ACCCAGAGGGGGCTGTTCTCATTTGCATTGTGCAAA...CCTAGAAGAATCACCGTGCAGACTGGTGAAACTGAACAAGCACCATTTGGGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371150.5
CDS-3UTR GCA 90 bp CAAAGTGCTTCTTCTACCCTGTCAGATTTTAAGATTTCTCTGTCAACCCCATCGCCTTGTCAGTCAGGCTaGTGTCGCAGGCTGGGTGTG +
Preference number: 4 (lower is better)
Translates to: QSASSTLSDFKISLSTPSPCQSG*CRRLGV
Trigger: CACACCCAGCCTGCGACAGCAGCCTGACTGACAAGG...CGATGGGGTTGACAGAGAAATCTTAAAATCTGACAGGGTAGAAGAAGCACTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR GCA 90 bp GAAACAAAGCTCCCAAATGGTGCTTGTTCAGTTTCACCAGTCTGCACGGTGATTACGTACCCCTCACCTTaGACCTTGAACCCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: ETKLPNGACSVSPVCTVITYPSP*TLNPAL
Trigger: CAGAGCAGGGTTCAAGGTGCAAGGTGAGGGGTACGT...AATCACCGTGCAGACTGGTGAAACTGAACAAGCACCATTTGGGAGCTTTGTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR GCA 90 bp TTCAGTTTCACCAGTCTGCACGGTGATTCTTCTAGGGTCCCCTACAGAATGCTTGTGCTAATGTGCTCCTaGCTGCCTGCTTGCTACACA +
Preference number: 4 (lower is better)
Translates to: FSFTSLHGDSSRVPYRMLVLMCS*LPACYT
Trigger: TGTGTAGCAAGCAGGCAGGCAGGAGCACATTAGCAC...AAGCATTCTGTAGGGGACCCTAGAAGAATCACCGTGCAGACTGGTGAAACTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR GCA 90 bp TTTCATGACTCACCACAGGGGCACCCAGCAAATTGGCATCTGAGCCAAAATGAGTCTAATGTGCTAATGTaGTCCTGCCTGCCTGCTTGC +
Preference number: 4 (lower is better)
Translates to: FHDSPQGHPANWHLSQNESNVLM*SCLPAC
Trigger: GCAAGCAGGCAGGCAGGAGCACATTAGCACATTAGA...CTCATTTTGGCTCAGATGCCAATTTGCTGGGTGCCCCTGTGGTGAGTCATGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317477.8
ENST00000371153.9
CDS-3UTR GCA 90 bp GCTCCCAAATGGTGCTTGTTCAGTTTCACCAGTCTGCACGGTGATTCTTCTAGGCCCCTACAGAATGCTTaGCAGGGGGTTGGCTTAAAT +
Preference number: 4 (lower is better)
Translates to: APKWCLFSFTSLHGDSSRPLQNA*QGVGLN
Trigger: ATTTAAGCCAACCCCCTGGCAAGCATTCTGTAGGGG...CCTAGAAGAATCACCGTGCAGACTGGTGAAACTGAACAAGCACCATTTGGGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR GCA 90 bp CCCCTCACCTTGCACCTTGAACCCTGCTCTGAAGCCCGTGTAGTTTTCAGGCTTTCTCCACCTCTGAGTTaGATCAACACATGTCATTGT +
Preference number: 4 (lower is better)
Translates to: PLTLHLEPCSEARVVFRLSPPLS*INTCHC
Trigger: ACAATGACATGTGTTGATGCAACTCAGAGGTGGAGA...AAGCCTGAAAACTACACGGGCTTCAGAGCAGGGTTCAAGGTGCAAGGTGAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS-3UTR GCA 90 bp AAGCTCCCAAATGGTGCTTGTTCAGTTTCACCAGTCTGCACGGTGATTCTTCTATGTTACAACAGGAAGTaGTGCTCAGCCGAAGGGCCC +
Preference number: 4 (lower is better)
Translates to: KLPNGACSVSPVCTVILLCYNRK*CSAEGP
Trigger: GGGCCCTTCGGCTGAGCAGCACTTCCTGTTGTAACA...TAGAAGAATCACCGTGCAGACTGGTGAAACTGAACAAGCACCATTTGGGAGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371150.5
CDS-3UTR CCA 90 bp GGTGCTTGTTCAGTTTCACCAGTCTGCACGGTGATTCTTCTAGGGTCCCCTACACAATTTCCATATGGGTaGGTGACTTCAGAGCGATGG +
Preference number: 4 (lower is better)
Translates to: GACSVSPVCTVILLGSPTQFPYG*VTSERW
Trigger: CCATCGCTCTGAAGTCACCCACCCATATGGAAATTG...TGTAGGGGACCCTAGAAGAATCACCGTGCAGACTGGTGAAACTGAACAAGCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CCA 90 bp AAGCTCCCAAATGGTGCTTGTTCAGTTTCACCAGTCTGCACGGTGATTCTTCTATGCTTGCCAGGGGGTTaGCTTAAATCCCCTCCCATC +
Preference number: 4 (lower is better)
Translates to: KLPNGACSVSPVCTVILLCLPGG*LKSPPI
Trigger: GATGGGAGGGGATTTAAGCCAACCCCCTGGCAAGCA...TAGAAGAATCACCGTGCAGACTGGTGAAACTGAACAAGCACCATTTGGGAGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CCA 90 bp AAGTATTGCTTTTCTAATGTGCTAATGTGCTCCTGCCTGCCTGCTTGCTACACATGCTGTCCTCACCGCTaGTCTCCTCACTTGAGGTGG +
Preference number: 4 (lower is better)
Translates to: KYCFSNVLMCSCLPACYTCCPHR*SPHLRW
Trigger: CCACCTCAAGTGAGGAGACCAGCGGTGAGGACAGCA...TGTGTAGCAAGCAGGCAGGCAGGAGCACATTAGCACATTAGAAAAGCAATACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CCA 90 bp CAACCCCATCGAAACAAAGCTCCCAAATGGTGCTTGTTCAGTTTCACCAGTCTGGCCTCGCAGGTGAGATaGGCATCTTTGACATGCTTG +
Preference number: 4 (lower is better)
Translates to: QPHRNKAPKWCLFSFTSLASQVR*ASLTCL
Trigger: CAAGCATGTCAAAGATGCCCATCTCACCTGCGAGGC...CAGACTGGTGAAACTGAACAAGCACCATTTGGGAGCTTTGTTTCGATGGGGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CCA 90 bp TGCCAAAGTGCTTCTTCTACCCTGTCAGATTTTAAGATTTCTCTGTCAACCCCACTTTCCTGGGCAGCATaGCAGGTGCCCTCAGGGATG +
Preference number: 4 (lower is better)
Translates to: CQSASSTLSDFKISLSTPLSWAA*QVPSGM
Trigger: CATCCCTGAGGGCACCTGCCATGCTGCCCAGGAAAG...TGGGGTTGACAGAGAAATCTTAAAATCTGACAGGGTAGAAGAAGCACTTTGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CCA 90 bp CAACCCCATCGAAACAAAGCTCCCAAATGGTGCTTGTTCAGTTTCACCAGTCTGTATATCTCTCGGCCTTaGAGTGGGGGACTTCTTCCC +
Preference number: 4 (lower is better)
Translates to: QPHRNKAPKWCLFSFTSLYISRP*SGGLLP
Trigger: GGGAAGAAGTCCCCCACTCCAAGGCCGAGAGATATA...CAGACTGGTGAAACTGAACAAGCACCATTTGGGAGCTTTGTTTCGATGGGGTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CCA 90 bp CAACCCCATCGAAACAAAGCTCCCAAATGGTGCTTGTTCAGTTTCACCAGTCTGTCAAGAGCTGGTCTGTaGTGGTCCCAGTTTCTGGCA +
Preference number: 4 (lower is better)
Translates to: QPHRNKAPKWCLFSFTSLSRAGL*WSQFLA
Trigger: TGCCAGAAACTGGGACCACCACAGACCAGCTCTTGA...CAGACTGGTGAAACTGAACAAGCACCATTTGGGAGCTTTGTTTCGATGGGGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CCA 90 bp GAACAGATATTTGCTTCTAGGGGATATGAGGGGAAAGCACCGGGAATTACCATGTTGATGCTCGTGGGCTaGAGCTGTGGAAACCTGCCA +
Preference number: 4 (lower is better)
Translates to: EQIFASRGYEGKAPGITMLMLVG*SCGNLP
Trigger: TGGCAGGTTTCCACAGCTCCAGCCCACGAGCATCAA...CATGGTAATTCCCGGTGCTTTCCCCTCATATCCCCTAGAAGCAAATATCTGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS-3UTR CCA 90 bp GAAACAAAGCTCCCAAATGGTGCTTGTTCAGTTTCACCAGTCTGCACGGTGATTAGGGTTGCAGGTGTGTaGAGAGGTAAGGAGGGACAG +
Preference number: 4 (lower is better)
Translates to: ETKLPNGACSVSPVCTVIRVAGV*RGKEGQ
Trigger: CTGTCCCTCCTTACCTCTCCACACACCTGCAACCCT...AATCACCGTGCAGACTGGTGAAACTGAACAAGCACCATTTGGGAGCTTTGTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371150.5
CDS-3UTR TCA 90 bp GCCAAAGTGCTTCTTCTACCCTGTCAGATTTTAAGATTTCTCTGTCAACCCCATCAGCTAAGCAGCGCTTaGACCATGTCCTCCCTGTCG +
Preference number: 4 (lower is better)
Translates to: AKVLLLPCQILRFLCQPHQLSSA*TMSSLS
Trigger: CGACAGGGAGGACATGGTTCAAGCGCTGCTTAGCTG...ATGGGGTTGACAGAGAAATCTTAAAATCTGACAGGGTAGAAGAAGCACTTTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR TCA 90 bp TTCAGTTTCACCAGTCTGCACGGTGATTCTTCTAGGGTCCCCTACAGAATGCTTTTTTGGATGTTTGGATaGCACCGACGTACCCCTCAC +
Preference number: 4 (lower is better)
Translates to: FSFTSLHGDSSRVPYRMLFWMFG*HRRTPH
Trigger: GTGAGGGGTACGTCGGTGTCATCCAAACATCCAAAA...AAGCATTCTGTAGGGGACCCTAGAAGAATCACCGTGCAGACTGGTGAAACTGAA
49% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR TCA 90 bp AAGGATAGGCCAGAGGCTTGCTACTCAAAGTGTGGTTGTGGCTCGATAGCATCACAGACTCAAAATAGCTaGGAGAATCTGACTCTGCCC +
Preference number: 4 (lower is better)
Translates to: KDRPEACYSKCGCGSIASQTQNS*ENLTLP
Trigger: GGGCAGAGTCAGATTCTCTCAGCTATTTTGAGTCTG...TGATGCTATCGAGCCACAACCACACTTTGAGTAGCAAGCCTCTGGCCTATCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS-3UTR TCA 90 bp GGTGCTTGTTCAGTTTCACCAGTCTGCACGGTGATTCTTCTAGGGTCCCCTACACTTCACGTGAGCTACTaGCCATATAAACCTTGCATG +
Preference number: 4 (lower is better)
Translates to: GACSVSPVCTVILLGSPTLHVSY*PYKPCM
Trigger: CATGCAAGGTTTATATGGTCAGTAGCTCACGTGAAG...TGTAGGGGACCCTAGAAGAATCACCGTGCAGACTGGTGAAACTGAACAAGCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317477.8
ENST00000371153.9
CDS-3UTR TCA 90 bp GGTGCTTGTTCAGTTTCACCAGTCTGCACGGTGATTCTTCTAGGGTCCCCTACAGCATCTGAGCCAAAATaGGAGTGCAAGCTTTTGAGT +
Preference number: 4 (lower is better)
Translates to: GACSVSPVCTVILLGSPTASEPK*ECKLLS
Trigger: ACTCAAAAGCTTGCACTCTCATTTTGGCTCAGATGC...TGTAGGGGACCCTAGAAGAATCACCGTGCAGACTGGTGAAACTGAACAAGCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317477.8
ENST00000371153.9
CDS-3UTR GCA 90 bp AACAAAGCTCCCAAATGGTGCTTGTTCAGTTTCACCAGTCTGCACGGTGATTCTTCTGATGGTCCACATTaGAGACGCCTGTCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: NKAPKWCLFSFTSLHGDSSDGPH*RRLSPA
Trigger: TGCTGGAGACAGGCGTCTGCAATGTGGACCATCAGA...AGAATCACCGTGCAGACTGGTGAAACTGAACAAGCACCATTTGGGAGCTTTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR GCA 90 bp AAGTATTGCTTTTCTAATGTGCTAATGTGCTCCTGCCTGCCTGCTTGCTACACACTGCAGATTGACATCTaGCTGGCAGCTAAGCAGCGC +
Preference number: 4 (lower is better)
Translates to: KYCFSNVLMCSCLPACYTLQIDI*LAAKQR
Trigger: GCGCTGCTTAGCTGCCAGGCAGATGTCAATCTGCAG...TGTGTAGCAAGCAGGCAGGCAGGAGCACATTAGCACATTAGAAAAGCAATACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR GCA 90 bp AAAGTGCTTCTTCTACCCTGTCAGATTTTAAGATTTCTCTGTCAACCCCATCGACCTTGTCAGTCAGGCTaGTGTCGCAGGCTGGGTGTG +
Preference number: 4 (lower is better)
Translates to: KVLLLPCQILRFLCQPHRPCQSG*CRRLGV
Trigger: CACACCCAGCCTGCGACAGCAGCCTGACTGACAAGG...TCGATGGGGTTGACAGAGAAATCTTAAAATCTGACAGGGTAGAAGAAGCACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR GCA 90 bp AAGGATAGGCCAGAGGCTTGCTACTCAAAGTGTGGTTGTGGCTCGATAGCATCATATAAACCTTGCATGTaGTGGCCCCAGGGAATATGG +
Preference number: 4 (lower is better)
Translates to: KDRPEACYSKCGCGSIASYKPCM*WPQGIW
Trigger: CCATATTCCCTGGGGCCAGCACATGCAAGGTTTATA...TGATGCTATCGAGCCACAACCACACTTTGAGTAGCAAGCCTCTGGCCTATCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS-3UTR GCA 90 bp TGCCAAAGTGCTTCTTCTACCCTGTCAGATTTTAAGATTTCTCTGTCAACCCCACCAGTTTCTGGCAGATaGTGGCTCAGTGCCCGGCAT +
Preference number: 4 (lower is better)
Translates to: CQSASSTLSDFKISLSTPPVSGR*WLSARH
Trigger: ATGCCGGGCACTGAGCCAGCATCTGCCAGAAACTGG...TGGGGTTGACAGAGAAATCTTAAAATCTGACAGGGTAGAAGAAGCACTTTGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR GCA 90 bp AAGGATAGGCCAGAGGCTTGCTACTCAAAGTGTGGTTGTGGCTCGATAGCATCAGTGCTAAATTTGGCCTaGTTGGCCCTTCTGTGGATA +
Preference number: 4 (lower is better)
Translates to: KDRPEACYSKCGCGSIASVLNLA*LALLWI
Trigger: TATCCACAGAAGGGCCAAGCAGGCCAAATTTAGCAC...TGATGCTATCGAGCCACAACCACACTTTGAGTAGCAAGCCTCTGGCCTATCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS-3UTR GCA 90 bp AGTGCTTCTTCTACCCTGTCAGATTTTAAGATTTCTCTGTCAACCCCATCGAAAAGCTCCGGGTACCCATaGTCCAGGCAGTTCCACTGC +
Preference number: 4 (lower is better)
Translates to: SASSTLSDFKISLSTPSKSSGYP*SRQFHC
Trigger: GCAGTGGAACTGCCTGGAGCATGGGTACCCGGAGCT...TTTCGATGGGGTTGACAGAGAAATCTTAAAATCTGACAGGGTAGAAGAAGCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS-3UTR GCA 90 bp GGAGGAGTCCAGAGAAGAAGGCTTTTGTTCCCCACGGCCAGTTCTTCTGCAGCCATGGCAAAAGAAGTTTaGTGTACCATTGCTGTAGAT +
Preference number: 4 (lower is better)
Translates to: GGVQRRRLLFPTASSSAAMAKEV*CTIAVD
Trigger: ATCTACAGCAATGGTACAGCAAACTTCTTTTGCCAT...GGCTGCAGAAGAACTGGCCGTGGGGAACAAAAGCCTTCTTCTCTGGACTCCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS-3UTR GCA 90 bp TTCAGTTTCACCAGTCTGCACGGTGATTCTTCTAGGGTCCCCTACAGAATGCTTTGGCTGGCATCTTTGTaGCCTGTGCTATCCATACAG +
Preference number: 4 (lower is better)
Translates to: FSFTSLHGDSSRVPYRMLWLASL*PVLSIQ
Trigger: CTGTATGGATAGCACAGGGCACAAAGATGCCAGCCA...AAGCATTCTGTAGGGGACCCTAGAAGAATCACCGTGCAGACTGGTGAAACTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371150.5
CDS-3UTR GCA 90 bp TGCCAAAGTGCTTCTTCTACCCTGTCAGATTTTAAGATTTCTCTGTCAACCCCAGGGTGGATGTGGTGCTaGAGCGCAAGGCTTGGCAAA +
Preference number: 4 (lower is better)
Translates to: CQSASSTLSDFKISLSTPGWMWC*SARLGK
Trigger: TTTGCCAAGCCTTGCGCTGCAGCACCACATCCACCC...TGGGGTTGACAGAGAAATCTTAAAATCTGACAGGGTAGAAGAAGCACTTTGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371150.5
CDS-3UTR CCA 90 bp AAGCTCCCAAATGGTGCTTGTTCAGTTTCACCAGTCTGCACGGTGATTCTTCTAGCCGAGGATCCATCGTaGTCCTGCAGATTGACATCT +
Preference number: 4 (lower is better)
Translates to: KLPNGACSVSPVCTVILLAEDPS*SCRLTS
Trigger: AGATGTCAATCTGCAGGACCACGATGGATCCTCGGC...TAGAAGAATCACCGTGCAGACTGGTGAAACTGAACAAGCACCATTTGGGAGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CCA 90 bp AAGTATTGCTTTTCTAATGTGCTAATGTGCTCCTGCCTGCCTGCTTGCTACACAGTGACTTCAGAGCGATaGACAAAGCTGTGCGGCCAG +
Preference number: 4 (lower is better)
Translates to: KYCFSNVLMCSCLPACYTVTSER*TKLCGQ
Trigger: CTGGCCGCACAGCTTTGTCCATCGCTCTGAAGTCAC...TGTGTAGCAAGCAGGCAGGCAGGAGCACATTAGCACATTAGAAAAGCAATACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CCA 90 bp TTCAGTTTCACCAGTCTGCACGGTGATTCTTCTAGGGTCCCCTACAGAATGCTTCCAGCAATTTCCATATaGGTGGGTGACTTCAGAGCG +
Preference number: 4 (lower is better)
Translates to: FSFTSLHGDSSRVPYRMLPAISI*VGDFRA
Trigger: CGCTCTGAAGTCACCCACCCATATGGAAATTGCTGG...AAGCATTCTGTAGGGGACCCTAGAAGAATCACCGTGCAGACTGGTGAAACTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CCA 90 bp TTTGGATGTTTGGATGACACCGACGTACCCCTCACCTTGCACCTTGAACCCTGCATACGGCTATGCAGGTaGCTTCTTGATGACAATAAC +
Preference number: 4 (lower is better)
Translates to: FGCLDDTDVPLTLHLEPCIRLCR*LLDDNN
Trigger: GTTATTGTCATCAAGAAGCCACCTGCATAGCCGTAT...GCAGGGTTCAAGGTGCAAGGTGAGGGGTACGTCGGTGTCATCCAAACATCCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317477.8
ENST00000371153.9
CDS-3UTR CCA 90 bp TTCAGTTTCACCAGTCTGCACGGTGATTCTTCTAGGGTCCCCTACAGAATGCTTTGTCTTCTCCATCTTTaGAGCGCTGACCCTCAGTGT +
Preference number: 4 (lower is better)
Translates to: FSFTSLHGDSSRVPYRMLCLLHL*SADPQC
Trigger: ACACTGAGGGTCAGCGCTCCAAAGATGGAGAAGACA...AAGCATTCTGTAGGGGACCCTAGAAGAATCACCGTGCAGACTGGTGAAACTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354381.3
ENST00000371153.9
CDS-3UTR CCA 90 bp GCCCGTGTAGTTTTCAGGCTTGGCCTAAGGCAAAAACTACAAAGCATCCTAATGGCCTCGCAGGTGAGATaGGCATCTTTGACATGCTTG +
Preference number: 4 (lower is better)
Translates to: ARVVFRLGLRQKLQSILMASQVR*ASLTCL
Trigger: CAAGCATGTCAAAGATGCCCATCTCACCTGCGAGGC...CATTAGGATGCTTTGTAGTTTTTGCCTTAGGCCAAGCCTGAAAACTACACGGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CCA 90 bp GAAACAAAGCTCCCAAATGGTGCTTGTTCAGTTTCACCAGTCTGCACGGTGATTTATATCTCTCGGCCTTaGAGTGGGGGACTTCTTCCC +
Preference number: 4 (lower is better)
Translates to: ETKLPNGACSVSPVCTVIYISRP*SGGLLP
Trigger: GGGAAGAAGTCCCCCACTCCAAGGCCGAGAGATATA...AATCACCGTGCAGACTGGTGAAACTGAACAAGCACCATTTGGGAGCTTTGTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CCA 90 bp AAGCTCCCAAATGGTGCTTGTTCAGTTTCACCAGTCTGCACGGTGATTCTTCTATATATCTCTCGGCCTTaGAGTGGGGGACTTCTTCCC +
Preference number: 4 (lower is better)
Translates to: KLPNGACSVSPVCTVILLYISRP*SGGLLP
Trigger: GGGAAGAAGTCCCCCACTCCAAGGCCGAGAGATATA...TAGAAGAATCACCGTGCAGACTGGTGAAACTGAACAAGCACCATTTGGGAGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CCA 90 bp GAACAGATATTTGCTTCTAGGGGATATGAGGGGAAAGCACCGGGAATTACCATGAGAGCTGGTCTGTGGTaGTCCCAGTTTCTGGCAGAT +
Preference number: 4 (lower is better)
Translates to: EQIFASRGYEGKAPGITMRAGLW*SQFLAD
Trigger: ATCTGCCAGAAACTGGGACCACCACAGACCAGCTCT...CATGGTAATTCCCGGTGCTTTCCCCTCATATCCCCTAGAAGCAAATATCTGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS-3UTR TCA 90 bp AAGCTCCCAAATGGTGCTTGTTCAGTTTCACCAGTCTGCACGGTGATTCTTCTAGGAACCACTCTTGACTaGTGGTGTTCAAGCTTTGCC +
Preference number: 4 (lower is better)
Translates to: KLPNGACSVSPVCTVILLGTTLD*WCSSFA
Trigger: GGCAAAGCTTGAACACCATCAGTCAAGAGTGGTTCC...TAGAAGAATCACCGTGCAGACTGGTGAAACTGAACAAGCACCATTTGGGAGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR TCA 90 bp GGTGCTTGTTCAGTTTCACCAGTCTGCACGGTGATTCTTCTAGGGTCCCCTACATTAACCCCAACAAACTaGAGGTTCTTTTTGGTCCCA +
Preference number: 4 (lower is better)
Translates to: GACSVSPVCTVILLGSPTLTPTN*RFFLVP
Trigger: TGGGACCAAAAAGAACCTTCAGTTTGTTGGGGTTAA...TGTAGGGGACCCTAGAAGAATCACCGTGCAGACTGGTGAAACTGAACAAGCACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR TCA 90 bp CAGGAATGTATGTGCATATTTGACATAGTTTCTTCTCTAGAAGGGTGGCTCTCTGCTGGTCTCCTCACTTaGGGTGGTCTCATACCCACC +
Preference number: 4 (lower is better)
Translates to: QECMCIFDIVSSLEGWLSAGLLT*GGLIPT
Trigger: GGTGGGTATGAGACCACCTCAAGTGAGGAGACCAGC...AGAGAGCCACCCTTCTAGAGAAGAAACTATGTCAAATATGCACATACATTCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR TCA 90 bp GAAACAAAGCTCCCAAATGGTGCTTGTTCAGTTTCACCAGTCTGCACGGTGATTTCTTTGACATGCTTGTaGTCTGGGCCGTCACACTTC +
Preference number: 4 (lower is better)
Translates to: ETKLPNGACSVSPVCTVISLTCL*SGPSHF
Trigger: GAAGTGTGACGGCCCAGATCACAAGCATGTCAAAGA...AATCACCGTGCAGACTGGTGAAACTGAACAAGCACCATTTGGGAGCTTTGTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR TCA 90 bp GAACAGATATTTGCTTCTAGGGGATATGAGGGGAAAGCACCGGGAATTACCATGTCTTTGACATGCTTGTaGTCTGGGCCGTCACACTTC +
Preference number: 4 (lower is better)
Translates to: EQIFASRGYEGKAPGITMSLTCL*SGPSHF
Trigger: GAAGTGTGACGGCCCAGATCACAAGCATGTCAAAGA...CATGGTAATTCCCGGTGCTTTCCCCTCATATCCCCTAGAAGCAAATATCTGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS-3UTR TCA 90 bp GCCCGTGTAGTTTTCAGGCTTGGCCTAAGGCAAAAACTACAAAGCATCCTAATGATTACCAAGCGGTGGTaGCTGGTTTTGCTCCTGTGT +
Preference number: 4 (lower is better)
Translates to: ARVVFRLGLRQKLQSILMITKRW*LVLLLC
Trigger: ACACAGGAGCAAAACCAGTCACCACCGCTTGGTAAT...CATTAGGATGCTTTGTAGTTTTTGCCTTAGGCCAAGCCTGAAAACTACACGGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS-3UTR TCA 90 bp AGTGCTTCTTCTACCCTGTCAGATTTTAAGATTTCTCTGTCAACCCCATCGAAAACGTCCGTCTGGCCCTaGGTGTCTTTGGCGTTCTCT +
Preference number: 4 (lower is better)
Translates to: SASSTLSDFKISLSTPSKTSVWP*VSLAFS
Trigger: AGAGAACGCCAAAGACACTCAGGGCCAGACGGACGT...TTTCGATGGGGTTGACAGAGAAATCTTAAAATCTGACAGGGTAGAAGAAGCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS-3UTR GCA 90 bp TGCCAAAGTGCTTCTTCTACCCTGTCAGATTTTAAGATTTCTCTGTCAACCCCACTGCAGATTGACATCTaGCTGGCAGCTAAGCAGCGC +
Preference number: 4 (lower is better)
Translates to: CQSASSTLSDFKISLSTPLQIDI*LAAKQR
Trigger: GCGCTGCTTAGCTGCCAGGCAGATGTCAATCTGCAG...TGGGGTTGACAGAGAAATCTTAAAATCTGACAGGGTAGAAGAAGCACTTTGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR GCA 90 bp CAACCCCATCGAAACAAAGCTCCCAAATGGTGCTTGTTCAGTTTCACCAGTCTGTATAAACCTTGCATGTaGTGGCCCCAGGGAATATGG +
Preference number: 4 (lower is better)
Translates to: QPHRNKAPKWCLFSFTSLYKPCM*WPQGIW
Trigger: CCATATTCCCTGGGGCCAGCACATGCAAGGTTTATA...CAGACTGGTGAAACTGAACAAGCACCATTTGGGAGCTTTGTTTCGATGGGGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317477.8
ENST00000371153.9
CDS-3UTR GCA 90 bp AAGCTCCCAAATGGTGCTTGTTCAGTTTCACCAGTCTGCACGGTGATTCTTCTACAGATGCTGGCTCAGTaGCCGGCATGCATTAAGAAA +
Preference number: 4 (lower is better)
Translates to: KLPNGACSVSPVCTVILLQMLAQ*PACIKK
Trigger: TTTCTTAATGCATGCCGGGCACTGAGCCAGCATCTG...TAGAAGAATCACCGTGCAGACTGGTGAAACTGAACAAGCACCATTTGGGAGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR GCA 90 bp AACAAAGCTCCCAAATGGTGCTTGTTCAGTTTCACCAGTCTGCACGGTGATTCTCAGATGCTGGCTCAGTaGCCGGCATGCATTAAGAAA +
Preference number: 4 (lower is better)
Translates to: NKAPKWCLFSFTSLHGDSQMLAQ*PACIKK
Trigger: TTTCTTAATGCATGCCGGGCACTGAGCCAGCATCTG...AGAATCACCGTGCAGACTGGTGAAACTGAACAAGCACCATTTGGGAGCTTTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR GCA 90 bp CAGGAATGTATGTGCATATTTGACATAGTTTCTTCTCTAGAAGGGTGGCTCTCTCCAGTTTCTGGCAGATaGTGGCTCAGTGCCCGGCAT +
Preference number: 4 (lower is better)
Translates to: QECMCIFDIVSSLEGWLSPVSGR*WLSARH
Trigger: ATGCCGGGCACTGAGCCAGCATCTGCCAGAAACTGG...AGAGAGCCACCCTTCTAGAGAAGAAACTATGTCAAATATGCACATACATTCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR GCA 90 bp AAGTATTGCTTTTCTAATGTGCTAATGTGCTCCTGCCTGCCTGCTTGCTACACACAGAAGCACACGTTCTaGTGGGCTCTGATTCCCTTG +
Preference number: 4 (lower is better)
Translates to: KYCFSNVLMCSCLPACYTQKHTF*WALIPL
Trigger: CAAGGGAATCAGAGCCCAGCAGAACGTGTGCTTCTG...TGTGTAGCAAGCAGGCAGGCAGGAGCACATTAGCACATTAGAAAAGCAATACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS-3UTR GCA 90 bp AAGCTCCCAAATGGTGCTTGTTCAGTTTCACCAGTCTGCACGGTGATTCTTCTAACAGATCTTGCAATGTaGTCAACAGGACAGGAGGCG +
Preference number: 4 (lower is better)
Translates to: KLPNGACSVSPVCTVILLTDLAM*STGQEA
Trigger: CGCCTCCTGTCCTGTTGAGCACATTGCAAGATCTGT...TAGAAGAATCACCGTGCAGACTGGTGAAACTGAACAAGCACCATTTGGGAGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371150.5
CDS-3UTR CCA 90 bp AAAGTGCTTCTTCTACCCTGTCAGATTTTAAGATTTCTCTGTCAACCCCATCGAATGTCCTCCCTGTCGTaGCTGACTCCCAGCATCAGC +
Preference number: 4 (lower is better)
Translates to: KVLLLPCQILRFLCQPHRMSSLS*LTPSIS
Trigger: GCTGATGCTGGGAGTCAGCCACGACAGGGAGGACAT...TCGATGGGGTTGACAGAGAAATCTTAAAATCTGACAGGGTAGAAGAAGCACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CCA 90 bp AAGCTCCCAAATGGTGCTTGTTCAGTTTCACCAGTCTGCACGGTGATTCTTCTACCAGCAATTTCCATATaGGTGGGTGACTTCAGAGCG +
Preference number: 4 (lower is better)
Translates to: KLPNGACSVSPVCTVILLPAISI*VGDFRA
Trigger: CGCTCTGAAGTCACCCACCCATATGGAAATTGCTGG...TAGAAGAATCACCGTGCAGACTGGTGAAACTGAACAAGCACCATTTGGGAGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CCA 90 bp GAAACAAAGCTCCCAAATGGTGCTTGTTCAGTTTCACCAGTCTGCACGGTGATTCCAGCAATTTCCATATaGGTGGGTGACTTCAGAGCG +
Preference number: 4 (lower is better)
Translates to: ETKLPNGACSVSPVCTVIPAISI*VGDFRA
Trigger: CGCTCTGAAGTCACCCACCCATATGGAAATTGCTGG...AATCACCGTGCAGACTGGTGAAACTGAACAAGCACCATTTGGGAGCTTTGTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CCA 90 bp AAGCTCCCAAATGGTGCTTGTTCAGTTTCACCAGTCTGCACGGTGATTCTTCTATGGCCCCAGGGAATATaGAAGCTTCGGAAGGTATTG +
Preference number: 4 (lower is better)
Translates to: KLPNGACSVSPVCTVILLWPQGI*KLRKVL
Trigger: CAATACCTTCCGAAGCTTCCATATTCCCTGGGGCCA...TAGAAGAATCACCGTGCAGACTGGTGAAACTGAACAAGCACCATTTGGGAGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317477.8
ENST00000371153.9
CDS-3UTR CCA 90 bp GCCCGTGTAGTTTTCAGGCTTGGCCTAAGGCAAAAACTACAAAGCATCCTAATGAAACCTTGCATGTGCTaGCCCCAGGGAATATGGAAG +
Preference number: 4 (lower is better)
Translates to: ARVVFRLGLRQKLQSILMKPCMC*PQGIWK
Trigger: CTTCCATATTCCCTGGGGCCAGCACATGCAAGGTTT...CATTAGGATGCTTTGTAGTTTTTGCCTTAGGCCAAGCCTGAAAACTACACGGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317477.8
ENST00000371153.9
CDS-3UTR CCA 90 bp CAGGAATGTATGTGCATATTTGACATAGTTTCTTCTCTAGAAGGGTGGCTCTCTGGTGGTCCCAGTTTCTaGCAGATGCTGGCTCAGTGC +
Preference number: 4 (lower is better)
Translates to: QECMCIFDIVSSLEGWLSGGPSF*QMLAQC
Trigger: GCACTGAGCCAGCATCTGCCAGAAACTGGGACCACC...AGAGAGCCACCCTTCTAGAGAAGAAACTATGTCAAATATGCACATACATTCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CCA 90 bp AAGTATTGCTTTTCTAATGTGCTAATGTGCTCCTGCCTGCCTGCTTGCTACACATCAAGAGCTGGTCTGTaGTGGTCCCAGTTTCTGGCA +
Preference number: 4 (lower is better)
Translates to: KYCFSNVLMCSCLPACYTSRAGL*WSQFLA
Trigger: TGCCAGAAACTGGGACCACCACAGACCAGCTCTTGA...TGTGTAGCAAGCAGGCAGGCAGGAGCACATTAGCACATTAGAAAAGCAATACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CCA 90 bp GCCAAAGTGCTTCTTCTACCCTGTCAGATTTTAAGATTTCTCTGTCAACCCCATCCTGCTGTTTCAGGCTaGAGATGCTGCCTGGATCCA +
Preference number: 4 (lower is better)
Translates to: AKVLLLPCQILRFLCQPHPAVSG*RCCLDP
Trigger: TGGATCCAGGCAGCATCTCCAGCCTGAAACAGCAGG...ATGGGGTTGACAGAGAAATCTTAAAATCTGACAGGGTAGAAGAAGCACTTTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS-3UTR CCA 90 bp AAAGTGCTTCTTCTACCCTGTCAGATTTTAAGATTTCTCTGTCAACCCCATCGACTCAGCAGCTGGCTCTaGATGCTGCTGAGCTTGGAG +
Preference number: 4 (lower is better)
Translates to: KVLLLPCQILRFLCQPHRLSSWL*MLLSLE
Trigger: CTCCAAGCTCAGCAGCATCCAGAGCCAGCTGCTGAG...TCGATGGGGTTGACAGAGAAATCTTAAAATCTGACAGGGTAGAAGAAGCACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS-3UTR TCA 90 bp CAGGAATGTATGTGCATATTTGACATAGTTTCTTCTCTAGAAGGGTGGCTCTCTCGGAAGCCAAGGGAGTaGTCATTACGGCAGTGTAGC +
Preference number: 4 (lower is better)
Translates to: QECMCIFDIVSSLEGWLSRKPRE*SLRQCS
Trigger: GCTACACTGCCGTAATGATCACTCCCTTGGCTTCCG...AGAGAGCCACCCTTCTAGAGAAGAAACTATGTCAAATATGCACATACATTCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR TCA 90 bp AAAGTGCTTCTTCTACCCTGTCAGATTTTAAGATTTCTCTGTCAACCCCATCGACGGAAGCCAAGGGAGTaGTCATTACGGCAGTGTAGC +
Preference number: 4 (lower is better)
Translates to: KVLLLPCQILRFLCQPHRRKPRE*SLRQCS
Trigger: GCTACACTGCCGTAATGATCACTCCCTTGGCTTCCG...TCGATGGGGTTGACAGAGAAATCTTAAAATCTGACAGGGTAGAAGAAGCACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR TCA 90 bp GCTCCCAAATGGTGCTTGTTCAGTTTCACCAGTCTGCACGGTGATTCTTCTAGGATAGCTGAGAGAATCTaGCTCTGCCCAAATACATGT +
Preference number: 4 (lower is better)
Translates to: APKWCLFSFTSLHGDSSRIAERI*LCPNTC
Trigger: ACATGTATTTGGGCAGAGTCAGATTCTCTCAGCTAT...CCTAGAAGAATCACCGTGCAGACTGGTGAAACTGAACAAGCACCATTTGGGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317477.8
ENST00000371153.9
CDS-3UTR TCA 90 bp TTCAGTTTCACCAGTCTGCACGGTGATTCTTCTAGGGTCCCCTACAGAATGCTTGCATCTGAGCCAAAATaGGAGTGCAAGCTTTTGAGT +
Preference number: 4 (lower is better)
Translates to: FSFTSLHGDSSRVPYRMLASEPK*ECKLLS
Trigger: ACTCAAAAGCTTGCACTCTCATTTTGGCTCAGATGC...AAGCATTCTGTAGGGGACCCTAGAAGAATCACCGTGCAGACTGGTGAAACTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317477.8
ENST00000371153.9
CDS-3UTR TCA 90 bp CAAAGTGCTTCTTCTACCCTGTCAGATTTTAAGATTTCTCTGTCAACCCCATCGCCAGTTGGGCTACAGTaGACTCCAGCTCTCGAATTC +
Preference number: 4 (lower is better)
Translates to: QSASSTLSDFKISLSTPSPVGLQ*TPALEF
Trigger: GAATTCGAGAGCTGGAGTTCACTGTAGCCCAACTGG...CGATGGGGTTGACAGAGAAATCTTAAAATCTGACAGGGTAGAAGAAGCACTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS-3UTR GCA 90 bp TGCCAAAGTGCTTCTTCTACCCTGTCAGATTTTAAGATTTCTCTGTCAACCCCATCTGATGGTCCACATTaGAGACGCCTGTCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: CQSASSTLSDFKISLSTPSDGPH*RRLSPA
Trigger: TGCTGGAGACAGGCGTCTGCAATGTGGACCATCAGA...TGGGGTTGACAGAGAAATCTTAAAATCTGACAGGGTAGAAGAAGCACTTTGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR GCA 90 bp CAAAGTGCTTCTTCTACCCTGTCAGATTTTAAGATTTCTCTGTCAACCCCATCGGATCCATCGTGGTCCTaGAGATTGACATCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: QSASSTLSDFKISLSTPSDPSWS*RLTSAW
Trigger: CCAGGCAGATGTCAATCTGCAGGACCACGATGGATC...CGATGGGGTTGACAGAGAAATCTTAAAATCTGACAGGGTAGAAGAAGCACTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR GCA 90 bp AAGCTCCCAAATGGTGCTTGTTCAGTTTCACCAGTCTGCACGGTGATTCTTCTATCAGTTTCACCAGTCTaGACGGTGATTCTTCTAGGG +
Preference number: 4 (lower is better)
Translates to: KLPNGACSVSPVCTVILLSVSPV*TVILLG
Trigger: CCCTAGAAGAATCACCGTGCAGACTGGTGAAACTGA...TAGAAGAATCACCGTGCAGACTGGTGAAACTGAACAAGCACCATTTGGGAGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR GCA 90 bp GCTCCCAAATGGTGCTTGTTCAGTTTCACCAGTCTGCACGGTGATTCTTCTAGGAAAGCTCCCAAATGGTaGTTGTTCAGTTTCACCAGT +
Preference number: 4 (lower is better)
Translates to: APKWCLFSFTSLHGDSSRKAPKW*LFSFTS
Trigger: ACTGGTGAAACTGAACAAGCACCATTTGGGAGCTTT...CCTAGAAGAATCACCGTGCAGACTGGTGAAACTGAACAAGCACCATTTGGGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR GCA 90 bp TTTCATGACTCACCACAGGGGCACCCAGCAAATTGGCATCTGAGCCAAAATGAGAGCTCTCGAATTCTTTaGTCCCTAGCTTTGATTTCC +
Preference number: 4 (lower is better)
Translates to: FHDSPQGHPANWHLSQNESSRIL*SLALIS
Trigger: GGAAATCAAAGCTAGGGAGCAAAGAATTCGAGAGCT...CTCATTTTGGCTCAGATGCCAATTTGCTGGGTGCCCCTGTGGTGAGTCATGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS-3UTR GCA 90 bp AGTGCTTCTTCTACCCTGTCAGATTTTAAGATTTCTCTGTCAACCCCATCGAAAGAGTCTTTCTGTCGCTaGCCCACAGAAAGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: SASSTLSDFKISLSTPSKESFCR*PTESLL
Trigger: CAGGAGGCTTTCTGTGGGGCAGCGACAGAAAGACTC...TTTCGATGGGGTTGACAGAGAAATCTTAAAATCTGACAGGGTAGAAGAAGCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS-3UTR GCA 90 bp GAAACAAAGCTCCCAAATGGTGCTTGTTCAGTTTCACCAGTCTGCACGGTGATTCATCTTTGTGCCCTGTaGTATCCATACAGCTGTAGG +
Preference number: 4 (lower is better)
Translates to: ETKLPNGACSVSPVCTVIHLCAL*YPYSCR
Trigger: CCTACAGCTGTATGGATAGCACAGGGCACAAAGATG...AATCACCGTGCAGACTGGTGAAACTGAACAAGCACCATTTGGGAGCTTTGTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371150.5
CDS-3UTR CCA 90 bp AAAGTGCTTCTTCTACCCTGTCAGATTTTAAGATTTCTCTGTCAACCCCATCGACAGTTTCAGGAAGTGTaGGGAGTGAGGCTGGACCTC +
Preference number: 4 (lower is better)
Translates to: KVLLLPCQILRFLCQPHRQFQEV*GVRLDL
Trigger: GAGGTCCAGCCTCACTCCCCACACTTCCTGAAACTG...TCGATGGGGTTGACAGAGAAATCTTAAAATCTGACAGGGTAGAAGAAGCACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CCA 90 bp TGCCAAAGTGCTTCTTCTACCCTGTCAGATTTTAAGATTTCTCTGTCAACCCCACAGCCATGTCTTCATTaGTCTCTGCGGAAGCCAAGG +
Preference number: 4 (lower is better)
Translates to: CQSASSTLSDFKISLSTPQPCLH*SLRKPR
Trigger: CCTTGGCTTCCGCAGAGACCAATGAAGACATGGCTG...TGGGGTTGACAGAGAAATCTTAAAATCTGACAGGGTAGAAGAAGCACTTTGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CCA 90 bp GAAACAAAGCTCCCAAATGGTGCTTGTTCAGTTTCACCAGTCTGCACGGTGATTCAATTTCCATATGGGTaGGTGACTTCAGAGCGATGG +
Preference number: 4 (lower is better)
Translates to: ETKLPNGACSVSPVCTVIQFPYG*VTSERW
Trigger: CCATCGCTCTGAAGTCACCCACCCATATGGAAATTG...AATCACCGTGCAGACTGGTGAAACTGAACAAGCACCATTTGGGAGCTTTGTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CCA 90 bp GAAACAAAGCTCCCAAATGGTGCTTGTTCAGTTTCACCAGTCTGCACGGTGATTGATGTTTTGGATGTTTaGATGACACCGACGTACCCC +
Preference number: 4 (lower is better)
Translates to: ETKLPNGACSVSPVCTVIDVLDV*MTPTYP
Trigger: GGGGTACGTCGGTGTCATCCAAACATCCAAAACATC...AATCACCGTGCAGACTGGTGAAACTGAACAAGCACCATTTGGGAGCTTTGTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CCA 90 bp GCCCGTGTAGTTTTCAGGCTTGGCCTAAGGCAAAAACTACAAAGCATCCTAATGGATGTTTTGGATGTTTaGATGACACCGACGTACCCC +
Preference number: 4 (lower is better)
Translates to: ARVVFRLGLRQKLQSILMDVLDV*MTPTYP
Trigger: GGGGTACGTCGGTGTCATCCAAACATCCAAAACATC...CATTAGGATGCTTTGTAGTTTTTGCCTTAGGCCAAGCCTGAAAACTACACGGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CCA 90 bp TGCCAAAGTGCTTCTTCTACCCTGTCAGATTTTAAGATTTCTCTGTCAACCCCATCAAGAGCTGGTCTGTaGTGGTCCCAGTTTCTGGCA +
Preference number: 4 (lower is better)
Translates to: CQSASSTLSDFKISLSTPSRAGL*WSQFLA
Trigger: TGCCAGAAACTGGGACCACCACAGACCAGCTCTTGA...TGGGGTTGACAGAGAAATCTTAAAATCTGACAGGGTAGAAGAAGCACTTTGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CCA 90 bp GCCAAAGTGCTTCTTCTACCCTGTCAGATTTTAAGATTTCTCTGTCAACCCCATCTTTGCCTCAAGAGCTaGTCTGTGGTGGTCCCAGTT +
Preference number: 4 (lower is better)
Translates to: AKVLLLPCQILRFLCQPHLCLKS*SVVVPV
Trigger: AACTGGGACCACCACAGACCAGCTCTTGAGGCAAAG...ATGGGGTTGACAGAGAAATCTTAAAATCTGACAGGGTAGAAGAAGCACTTTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CCA 90 bp AAAGTGCTTCTTCTACCCTGTCAGATTTTAAGATTTCTCTGTCAACCCCATCGACCAAGCGGTGGTGACTaGTTTTGCTCCTGTGTCCCA +
Preference number: 4 (lower is better)
Translates to: KVLLLPCQILRFLCQPHRPSGGD*FCSCVP
Trigger: TGGGACACAGGAGCAAAACCAGTCACCACCGCTTGG...TCGATGGGGTTGACAGAGAAATCTTAAAATCTGACAGGGTAGAAGAAGCACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS-3UTR CCA 90 bp TGCCAAAGTGCTTCTTCTACCCTGTCAGATTTTAAGATTTCTCTGTCAACCCCAGAGAGGGAGGTGATTTaGAACCTTCACCACACCCTC +
Preference number: 4 (lower is better)
Translates to: CQSASSTLSDFKISLSTPEREVI*NLHHTL
Trigger: GAGGGTGTGGTGAAGGTTCCAAATCACCTCCCTCTC...TGGGGTTGACAGAGAAATCTTAAAATCTGACAGGGTAGAAGAAGCACTTTGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS-3UTR CCA 90 bp AGTGCTTCTTCTACCCTGTCAGATTTTAAGATTTCTCTGTCAACCCCATCGAAATACAGGTGGCGGGGGTaGAATCTCGCTGATGTTGAG +
Preference number: 4 (lower is better)
Translates to: SASSTLSDFKISLSTPSKYRWRG*NLADVE
Trigger: CTCAACATCAGCGAGATTCCACCCCCGCCACCTGTA...TTTCGATGGGGTTGACAGAGAAATCTTAAAATCTGACAGGGTAGAAGAAGCACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS-3UTR CCA 90 bp AAGTATTGCTTTTCTAATGTGCTAATGTGCTCCTGCCTGCCTGCTTGCTACACATATCACACGACTCCCTaGTCAAGAGTCCATGGACAG +
Preference number: 4 (lower is better)
Translates to: KYCFSNVLMCSCLPACYTYHTTP*SRVHGQ
Trigger: CTGTCCATGGACTCTTGACCAGGGAGTCGTGTGATA...TGTGTAGCAAGCAGGCAGGCAGGAGCACATTAGCACATTAGAAAAGCAATACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS-3UTR CCA 90 bp AAAGTGCTTCTTCTACCCTGTCAGATTTTAAGATTTCTCTGTCAACCCCATCGACTCATTTGCCCTCCCTaGCTGGCATCTTTGTGCCCT +
Preference number: 4 (lower is better)
Translates to: KVLLLPCQILRFLCQPHRLICPP*LASLCP
Trigger: AGGGCACAAAGATGCCAGCCAGGGAGGGCAAATGAG...TCGATGGGGTTGACAGAGAAATCTTAAAATCTGACAGGGTAGAAGAAGCACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371150.5
CDS-3UTR CCA 90 bp CAGGAATGTATGTGCATATTTGACATAGTTTCTTCTCTAGAAGGGTGGCTCTCTTCAAGGGCACCTCAGTaGTCCTTCCTGGCTCACAAG +
Preference number: 4 (lower is better)
Translates to: QECMCIFDIVSSLEGWLSSRAPQ*SFLAHK
Trigger: CTTGTGAGCCAGGAAGGACCACTGAGGTGCCCTTGA...AGAGAGCCACCCTTCTAGAGAAGAAACTATGTCAAATATGCACATACATTCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371150.5
3UTR CAA 72 bp TGTCAACCCCATCGAAACAAAGCTCCCAAATGGTGCTaGTTCAGTTTCACCAGTCTGCACGGTGATTCTTCT +
Preference number: 4 (lower is better)
Translates to: CQPHRNKAPKWC*FSFTSLHGDSS
Trigger: AGAAGAATCACCGTGCAGACTGGTGAAACTGAACAAGCACCATTTGGGAGCTTTGTTTCGATGGGGTTGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR TCA 90 bp CAAAGTGCTTCTTCTACCCTGTCAGATTTTAAGATTTCTCTGTCAACCCCATCGGGAACCACTCTTGACTaGTGGTGTTCAAGCTTTGCC +
Preference number: 4 (lower is better)
Translates to: QSASSTLSDFKISLSTPSGTTLD*WCSSFA
Trigger: GGCAAAGCTTGAACACCATCAGTCAAGAGTGGTTCC...CGATGGGGTTGACAGAGAAATCTTAAAATCTGACAGGGTAGAAGAAGCACTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR TCA 90 bp AGTGCTTCTTCTACCCTGTCAGATTTTAAGATTTCTCTGTCAACCCCATCGAAATTCTCTTCATCCCCCTaGGAGGACTGGTCTTTGGCA +
Preference number: 4 (lower is better)
Translates to: SASSTLSDFKISLSTPSKFSSSP*EDWSLA
Trigger: TGCCAAAGACCAGTCCTCTCAGGGGGATGAAGAGAA...TTTCGATGGGGTTGACAGAGAAATCTTAAAATCTGACAGGGTAGAAGAAGCACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS-3UTR TCA 90 bp TCTGAGTTGCATCAACACATGTCATTGTGTTCTGGGACTCTGAGCCTCTCTTATTGCTGCCTAGAAGGTTaGCTTCAATGCCCTTATCAC +
Preference number: 4 (lower is better)
Translates to: SELHQHMSLCSGTLSLSYCCLEG*LQCPYH
Trigger: GTGATAAGGGCATTGAAGTCAACCTTCTAGGCAGCA...ATAAGAGAGGCTCAGAGTCCCAGAACACAATGACATGTGTTGATGCAACTCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS-3UTR TCA 90 bp TTTCATGACTCACCACAGGGGCACCCAGCAAATTGGCATCTGAGCCAAAATGAGCCACAAATTGGATTTTaGAACTTCCATCAGCTGCTT +
Preference number: 4 (lower is better)
Translates to: FHDSPQGHPANWHLSQNEPQIGF*NFHQLL
Trigger: AAGCAGCTGATGGAAGTTTCAAAATCCAATTTGTGG...CTCATTTTGGCTCAGATGCCAATTTGCTGGGTGCCCCTGTGGTGAGTCATGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS-3UTR GCA 90 bp CAGGAATGTATGTGCATATTTGACATAGTTTCTTCTCTAGAAGGGTGGCTCTCTGATCCATCGTGGTCCTaGAGATTGACATCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: QECMCIFDIVSSLEGWLSDPSWS*RLTSAW
Trigger: CCAGGCAGATGTCAATCTGCAGGACCACGATGGATC...AGAGAGCCACCCTTCTAGAGAAGAAACTATGTCAAATATGCACATACATTCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR GCA 90 bp GCCAAAGTGCTTCTTCTACCCTGTCAGATTTTAAGATTTCTCTGTCAACCCCATGTGCTCCTGCCTGCCTaGTTGCTACACAATGTTACA +
Preference number: 4 (lower is better)
Translates to: AKVLLLPCQILRFLCQPHVLLPA*LLHNVT
Trigger: TGTAACATTGTGTAGCAAGCAGGCAGGCAGGAGCAC...ATGGGGTTGACAGAGAAATCTTAAAATCTGACAGGGTAGAAGAAGCACTTTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR GCA 90 bp TGCCAAAGTGCTTCTTCTACCCTGTCAGATTTTAAGATTTCTCTGTCAACCCCAGTGCTCCTGCCTGCCTaGTTGCTACACAATGTTACA +
Preference number: 4 (lower is better)
Translates to: CQSASSTLSDFKISLSTPVLLPA*LLHNVT
Trigger: TGTAACATTGTGTAGCAAGCAGGCAGGCAGGAGCAC...TGGGGTTGACAGAGAAATCTTAAAATCTGACAGGGTAGAAGAAGCACTTTGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR GCA 90 bp CAAAGTGCTTCTTCTACCCTGTCAGATTTTAAGATTTCTCTGTCAACCCCATCGCCCCTACAGAATGCTTaGCAGGGGGTTGGCTTAAAT +
Preference number: 4 (lower is better)
Translates to: QSASSTLSDFKISLSTPSPLQNA*QGVGLN
Trigger: ATTTAAGCCAACCCCCTGGCAAGCATTCTGTAGGGG...CGATGGGGTTGACAGAGAAATCTTAAAATCTGACAGGGTAGAAGAAGCACTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR GCA 90 bp GCCCGTGTAGTTTTCAGGCTTGGCCTAAGGCAAAAACTACAAAGCATCCTAATGGCATTGATGCCAAAGTaGTTCTTCTACCCTGTCAGA +
Preference number: 4 (lower is better)
Translates to: ARVVFRLGLRQKLQSILMALMPK*FFYPVR
Trigger: TCTGACAGGGTAGAAGAAGCACTTTGGCATCAATGC...CATTAGGATGCTTTGTAGTTTTTGCCTTAGGCCAAGCCTGAAAACTACACGGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR GCA 90 bp TGCCAAAGTGCTTCTTCTACCCTGTCAGATTTTAAGATTTCTCTGTCAACCCCACAGATGCTGGCTCAGTaGCCGGCATGCATTAAGAAA +
Preference number: 4 (lower is better)
Translates to: CQSASSTLSDFKISLSTPQMLAQ*PACIKK
Trigger: TTTCTTAATGCATGCCGGGCACTGAGCCAGCATCTG...TGGGGTTGACAGAGAAATCTTAAAATCTGACAGGGTAGAAGAAGCACTTTGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR GCA 90 bp CAAAGTGCTTCTTCTACCCTGTCAGATTTTAAGATTTCTCTGTCAACCCCATCGGGTGGTGACTGGTTTTaGTCCTGTGTCCCAAGTGAT +
Preference number: 4 (lower is better)
Translates to: QSASSTLSDFKISLSTPSGGDWF*SCVPSD
Trigger: ATCACTTGGGACACAGGAGCAAAACCAGTCACCACC...CGATGGGGTTGACAGAGAAATCTTAAAATCTGACAGGGTAGAAGAAGCACTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS-3UTR GCA 90 bp CAAAGTGCTTCTTCTACCCTGTCAGATTTTAAGATTTCTCTGTCAACCCCATCGCTTTCAACTCTCATTTaGCCTCCCTGGCTGGCATCT +
Preference number: 4 (lower is better)
Translates to: QSASSTLSDFKISLSTPSLSTLI*PPWLAS
Trigger: AGATGCCAGCCAGGGAGGGCAAATGAGAGTTGAAAG...CGATGGGGTTGACAGAGAAATCTTAAAATCTGACAGGGTAGAAGAAGCACTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371150.5
CDS-3UTR GCA 90 bp AAGTATTGCTTTTCTAATGTGCTAATGTGCTCCTGCCTGCCTGCTTGCTACACACAGCACTTAATCTCCTaGCCCTGTACACACACACAT +
Preference number: 4 (lower is better)
Translates to: KYCFSNVLMCSCLPACYTQHLIS*PCTHTH
Trigger: ATGTGTGTGTGTACAGGGGCAGGAGATTAAGTGCTG...TGTGTAGCAAGCAGGCAGGCAGGAGCACATTAGCACATTAGAAAAGCAATACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371150.5
CDS-3UTR CCA 90 bp CAACCCCATCGAAACAAAGCTCCCAAATGGTGCTTGTTCAGTTTCACCAGTCTGAACAAAGCTCCCAAATaGTGCTTGTTCAGTTTCACC +
Preference number: 4 (lower is better)
Translates to: QPHRNKAPKWCLFSFTSLNKAPK*CLFSFT
Trigger: GGTGAAACTGAACAAGCACCATTTGGGAGCTTTGTT...CAGACTGGTGAAACTGAACAAGCACCATTTGGGAGCTTTGTTTCGATGGGGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CCA 90 bp AACAAAGCTCCCAAATGGTGCTTGTTCAGTTTCACCAGTCTGCACGGTGATTCTACTGAAGGTTCTTTTTaGTCCCATTACCTCCTGCAC +
Preference number: 4 (lower is better)
Translates to: NKAPKWCLFSFTSLHGDSTEGSF*SHYLLH
Trigger: GTGCAGGAGGTAATGGGACCAAAAAGAACCTTCAGT...AGAATCACCGTGCAGACTGGTGAAACTGAACAAGCACCATTTGGGAGCTTTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CCA 90 bp AAGGATAGGCCAGAGGCTTGCTACTCAAAGTGTGGTTGTGGCTCGATAGCATCATGCTTGGCCCTTCTGTaGATAGGAATTCTTTTGATA +
Preference number: 4 (lower is better)
Translates to: KDRPEACYSKCGCGSIASCLALL*IGILLI
Trigger: TATCAAAAGAATTCCTATCCACAGAAGGGCCAAGCA...TGATGCTATCGAGCCACAACCACACTTTGAGTAGCAAGCCTCTGGCCTATCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS-3UTR CCA 90 bp GCCCGTGTAGTTTTCAGGCTTGGCCTAAGGCAAAAACTACAAAGCATCCTAATGCATGTCATTGTGTTCTaGGACTCTGAGCCTCTCTTA +
Preference number: 4 (lower is better)
Translates to: ARVVFRLGLRQKLQSILMHVIVF*DSEPLL
Trigger: TAAGAGAGGCTCAGAGTCCCAGAACACAATGACATG...CATTAGGATGCTTTGTAGTTTTTGCCTTAGGCCAAGCCTGAAAACTACACGGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS-3UTR CCA 90 bp AAGCTCCCAAATGGTGCTTGTTCAGTTTCACCAGTCTGCACGGTGATTCTTCTATGTAAATCAATGTTTTaGGGACCTCTTGGAGGAGCC +
Preference number: 4 (lower is better)
Translates to: KLPNGACSVSPVCTVILLCKSMF*GPLGGA
Trigger: GGCTCCTCCAAGAGGTCCCCAAAACATTGATTTACA...TAGAAGAATCACCGTGCAGACTGGTGAAACTGAACAAGCACCATTTGGGAGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371150.5
CDS-3UTR TCA 90 bp GCCCGTGTAGTTTTCAGGCTTGGCCTAAGGCAAAAACTACAAAGCATCCTAATGATTGGAGCCACTAGATaGCTCAGAAATAGTCAAGAC +
Preference number: 4 (lower is better)
Translates to: ARVVFRLGLRQKLQSILMIGATR*LRNSQD
Trigger: GTCTTGACTATTTCTGAGTCATCTAGTGGCTCCAAT...CATTAGGATGCTTTGTAGTTTTTGCCTTAGGCCAAGCCTGAAAACTACACGGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR TCA 90 bp GCCCGTGTAGTTTTCAGGCTTGGCCTAAGGCAAAAACTACAAAGCATCCTAATGATAGCTGAGAGAATCTaGCTCTGCCCAAATACATGT +
Preference number: 4 (lower is better)
Translates to: ARVVFRLGLRQKLQSILMIAERI*LCPNTC
Trigger: ACATGTATTTGGGCAGAGTCAGATTCTCTCAGCTAT...CATTAGGATGCTTTGTAGTTTTTGCCTTAGGCCAAGCCTGAAAACTACACGGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317477.8
ENST00000371153.9
CDS-3UTR TCA 90 bp CAAAGTGCTTCTTCTACCCTGTCAGATTTTAAGATTTCTCTGTCAACCCCATCGCACCGGGAATTACCATaGGGTAATGGATACGGCTAT +
Preference number: 4 (lower is better)
Translates to: QSASSTLSDFKISLSTPSHRELP*GNGYGY
Trigger: ATAGCCGTATCCATTACCTCATGGTAATTCCCGGTG...CGATGGGGTTGACAGAGAAATCTTAAAATCTGACAGGGTAGAAGAAGCACTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317477.8
ENST00000371153.9
CDS-3UTR TCA 90 bp TCTGAGTTGCATCAACACATGTCATTGTGTTCTGGGACTCTGAGCCTCTCTTATCTTCACGTGAGCTACTaGCCATATAAACCTTGCATG +
Preference number: 4 (lower is better)
Translates to: SELHQHMSLCSGTLSLSYLHVSY*PYKPCM
Trigger: CATGCAAGGTTTATATGGTCAGTAGCTCACGTGAAG...ATAAGAGAGGCTCAGAGTCCCAGAACACAATGACATGTGTTGATGCAACTCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS-3UTR GCA 90 bp GAAACAAAGCTCCCAAATGGTGCTTGTTCAGTTTCACCAGTCTGCACGGTGATTAAAGCTCCCAAATGGTaGTTGTTCAGTTTCACCAGT +
Preference number: 4 (lower is better)
Translates to: ETKLPNGACSVSPVCTVIKAPKW*LFSFTS
Trigger: ACTGGTGAAACTGAACAAGCACCATTTGGGAGCTTT...AATCACCGTGCAGACTGGTGAAACTGAACAAGCACCATTTGGGAGCTTTGTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR GCA 90 bp GCCCGTGTAGTTTTCAGGCTTGGCCTAAGGCAAAAACTACAAAGCATCCTAATGAAAGCTCCCAAATGGTaGTTGTTCAGTTTCACCAGT +
Preference number: 4 (lower is better)
Translates to: ARVVFRLGLRQKLQSILMKAPKW*LFSFTS
Trigger: ACTGGTGAAACTGAACAAGCACCATTTGGGAGCTTT...CATTAGGATGCTTTGTAGTTTTTGCCTTAGGCCAAGCCTGAAAACTACACGGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR GCA 90 bp AGTGCTTCTTCTACCCTGTCAGATTTTAAGATTTCTCTGTCAACCCCATCGAAAGAAACTTCCATCAGCTaGTTCTTGTGCAGCACCTCC +
Preference number: 4 (lower is better)
Translates to: SASSTLSDFKISLSTPSKETSIS*FLCSTS
Trigger: GGAGGTGCTGCACAAGAAGCAGCTGATGGAAGTTTC...TTTCGATGGGGTTGACAGAGAAATCTTAAAATCTGACAGGGTAGAAGAAGCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS-3UTR GCA 90 bp CAAAGTGCTTCTTCTACCCTGTCAGATTTTAAGATTTCTCTGTCAACCCCATCGTTCCTGGCTCACAAGTaGATACTGACACTAGGGTTG +
Preference number: 4 (lower is better)
Translates to: QSASSTLSDFKISLSTPSFLAHK*ILTLGL
Trigger: CAACCCTAGTGTCAGTATGCACTTGTGAGCCAGGAA...CGATGGGGTTGACAGAGAAATCTTAAAATCTGACAGGGTAGAAGAAGCACTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371150.5
CDS-3UTR CCA 90 bp CAGGAATGTATGTGCATATTTGACATAGTTTCTTCTCTAGAAGGGTGGCTCTCTTCACGATGGAGAAGTTaGAGTGGGACACGCTGTAGT +
Preference number: 4 (lower is better)
Translates to: QECMCIFDIVSSLEGWLSSRWRS*SGTRCS
Trigger: ACTACAGCGTGTCCCACTCCAACTTCTCCATCGTGA...AGAGAGCCACCCTTCTAGAGAAGAAACTATGTCAAATATGCACATACATTCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CCA 90 bp AGTGCTTCTTCTACCCTGTCAGATTTTAAGATTTCTCTGTCAACCCCATCGAAACCAGCAATTTCCATATaGGTGGGTGACTTCAGAGCG +
Preference number: 4 (lower is better)
Translates to: SASSTLSDFKISLSTPSKPAISI*VGDFRA
Trigger: CGCTCTGAAGTCACCCACCCATATGGAAATTGCTGG...TTTCGATGGGGTTGACAGAGAAATCTTAAAATCTGACAGGGTAGAAGAAGCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CCA 90 bp CAGGAATGTATGTGCATATTTGACATAGTTTCTTCTCTAGAAGGGTGGCTCTCTTGGCCCCAGGGAATATaGAAGCTTCGGAAGGTATTG +
Preference number: 4 (lower is better)
Translates to: QECMCIFDIVSSLEGWLSWPQGI*KLRKVL
Trigger: CAATACCTTCCGAAGCTTCCATATTCCCTGGGGCCA...AGAGAGCCACCCTTCTAGAGAAGAAACTATGTCAAATATGCACATACATTCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317477.8
ENST00000371153.9
CDS-3UTR CCA 90 bp AAAGTGCTTCTTCTACCCTGTCAGATTTTAAGATTTCTCTGTCAACCCCATCGAGACTTGCTCAGTGAATaGGAGTGTAGGAGCAGAACG +
Preference number: 4 (lower is better)
Translates to: KVLLLPCQILRFLCQPHRDLLSE*ECRSRT
Trigger: CGTTCTGCTCCTACACTCCCATTCACTGAGCAAGTC...TCGATGGGGTTGACAGAGAAATCTTAAAATCTGACAGGGTAGAAGAAGCACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371150.5
3UTR CAA 72 bp ATTCTCTCCACCTCTGAGTTGCATCAACACATGTCATaGTGTTCTGGGACTCTGAGCCTCTCTTATGAATCA +
Preference number: 4 (lower is better)
Translates to: ILSTSELHQHMS*CSGTLSLSYES
Trigger: TGATTCATAAGAGAGGCTCAGAGTCCCAGAACACAATGACATGTGTTGATGCAACTCAGAGGTGGAGAGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS-3UTR TCA 90 bp AGTGCTTCTTCTACCCTGTCAGATTTTAAGATTTCTCTGTCAACCCCATCGAAAGTCTGTAAAACTTGTTaGAGGTTCTTGGCGAGCTGC +
Preference number: 4 (lower is better)
Translates to: SASSTLSDFKISLSTPSKVCKTC*RFLASC
Trigger: GCAGCTCGCCAAGAACCTTCAACAAGTTTTACAGAC...TTTCGATGGGGTTGACAGAGAAATCTTAAAATCTGACAGGGTAGAAGAAGCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354381.3
ENST00000371153.9
CDS-3UTR TCA 90 bp AGTGCTTCTTCTACCCTGTCAGATTTTAAGATTTCTCTGTCAACCCCATCGAAAGCCCATTTCCATATGTaGGCAGCACTTAATCTCCTG +
Preference number: 4 (lower is better)
Translates to: SASSTLSDFKISLSTPSKAHFHM*AALNLL
Trigger: CAGGAGATTAAGTGCTGCTCACATATGGAAATGGGC...TTTCGATGGGGTTGACAGAGAAATCTTAAAATCTGACAGGGTAGAAGAAGCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371150.5
CDS-3UTR TCA 90 bp AAGTATTGCTTTTCTAATGTGCTAATGTGCTCCTGCCTGCCTGCTTGCTACACAAAAGCAGTCAAATTGTaGTTTGTGGCAGGAAGCAGA +
Preference number: 4 (lower is better)
Translates to: KYCFSNVLMCSCLPACYTKAVKL*FVAGSR
Trigger: TCTGCTTCCTGCCACAAATCACAATTTGACTGCTTT...TGTGTAGCAAGCAGGCAGGCAGGAGCACATTAGCACATTAGAAAAGCAATACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371150.5
CDS-3UTR GCA 90 bp AGTGCTTCTTCTACCCTGTCAGATTTTAAGATTTCTCTGTCAACCCCATCGAAATCAGTTTCACCAGTCTaGACGGTGATTCTTCTAGGG +
Preference number: 4 (lower is better)
Translates to: SASSTLSDFKISLSTPSKSVSPV*TVILLG
Trigger: CCCTAGAAGAATCACCGTGCAGACTGGTGAAACTGA...TTTCGATGGGGTTGACAGAGAAATCTTAAAATCTGACAGGGTAGAAGAAGCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR GCA 90 bp AAAGTGCTTCTTCTACCCTGTCAGATTTTAAGATTTCTCTGTCAACCCCATCGAGGTGAACAACACCTCTaGTTCTCTGGCATTGTGTTC +
Preference number: 4 (lower is better)
Translates to: KVLLLPCQILRFLCQPHRGEQHL*FSGIVF
Trigger: GAACACAATGCCAGAGAAGCAGAGGTGTTGTTCACC...TCGATGGGGTTGACAGAGAAATCTTAAAATCTGACAGGGTAGAAGAAGCACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS-3UTR CCA 90 bp AAGTATTGCTTTTCTAATGTGCTAATGTGCTCCTGCCTGCCTGCTTGCTACACAAACAAAGCTCCCAAATaGTGCTTGTTCAGTTTCACC +
Preference number: 4 (lower is better)
Translates to: KYCFSNVLMCSCLPACYTNKAPK*CLFSFT
Trigger: GGTGAAACTGAACAAGCACCATTTGGGAGCTTTGTT...TGTGTAGCAAGCAGGCAGGCAGGAGCACATTAGCACATTAGAAAAGCAATACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CCA 90 bp CAGGAATGTATGTGCATATTTGACATAGTTTCTTCTCTAGAAGGGTGGCTCTCTTTGGCAAATGGAGTGTaGGCTGGCTTTCAACTCTCA +
Preference number: 4 (lower is better)
Translates to: QECMCIFDIVSSLEGWLSLANGV*AGFQLS
Trigger: TGAGAGTTGAAAGCCAGCCCACACTCCATTTGCCAA...AGAGAGCCACCCTTCTAGAGAAGAAACTATGTCAAATATGCACATACATTCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371150.5
CDS-3UTR TCA 90 bp CAGGAATGTATGTGCATATTTGACATAGTTTCTTCTCTAGAAGGGTGGCTCTCTCAGCAAATTGGCATCTaGGCCAAAATGAGAGTGCAA +
Preference number: 4 (lower is better)
Translates to: QECMCIFDIVSSLEGWLSQQIGI*AKMRVQ
Trigger: TTGCACTCTCATTTTGGCTCAGATGCCAATTTGCTG...AGAGAGCCACCCTTCTAGAGAAGAAACTATGTCAAATATGCACATACATTCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317477.8
ENST00000371153.9
CDS-3UTR TCA 90 bp AGTGCTTCTTCTACCCTGTCAGATTTTAAGATTTCTCTGTCAACCCCATCGAAACAGCAAATTGGCATCTaGGCCAAAATGAGAGTGCAA +
Preference number: 4 (lower is better)
Translates to: SASSTLSDFKISLSTPSKQQIGI*AKMRVQ
Trigger: TTGCACTCTCATTTTGGCTCAGATGCCAATTTGCTG...TTTCGATGGGGTTGACAGAGAAATCTTAAAATCTGACAGGGTAGAAGAAGCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317477.8
ENST00000371153.9
CDS-3UTR GCA 90 bp CAGGAATGTATGTGCATATTTGACATAGTTTCTTCTCTAGAAGGGTGGCTCTCTGCATTGATGCCAAAGTaGTTCTTCTACCCTGTCAGA +
Preference number: 4 (lower is better)
Translates to: QECMCIFDIVSSLEGWLSALMPK*FFYPVR
Trigger: TCTGACAGGGTAGAAGAAGCACTTTGGCATCAATGC...AGAGAGCCACCCTTCTAGAGAAGAAACTATGTCAAATATGCACATACATTCCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR GCA 90 bp AAAGTGCTTCTTCTACCCTGTCAGATTTTAAGATTTCTCTGTCAACCCCATCGACAAGGACACAGATCTTaGAATGTGCTCAACAGGACA +
Preference number: 4 (lower is better)
Translates to: KVLLLPCQILRFLCQPHRQGHRS*NVLNRT
Trigger: TGTCCTGTTGAGCACATTGCAAGATCTGTGTCCTTG...TCGATGGGGTTGACAGAGAAATCTTAAAATCTGACAGGGTAGAAGAAGCACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371150.5
CDS-3UTR CCA 90 bp CAGGAATGTATGTGCATATTTGACATAGTTTCTTCTCTAGAAGGGTGGCTCTCTTTTAAGGCTGGTCGATaGGGAGATCTCATCTGTCTT +
Preference number: 4 (lower is better)
Translates to: QECMCIFDIVSSLEGWLSFKAGR*GDLICL
Trigger: AAGACAGATGAGATCTCCCCATCGACCAGCCTTAAA...AGAGAGCCACCCTTCTAGAGAAGAAACTATGTCAAATATGCACATACATTCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354381.3
CDS-3UTR CCA 90 bp GCCAAAGTGCTTCTTCTACCCTGTCAGATTTTAAGATTTCTCTGTCAACCCCATTCAAATTGTGATTTGTaGCAGGAAGCAGACTCGCAT +
Preference number: 4 (lower is better)
Translates to: AKVLLLPCQILRFLCQPHSNCDL*QEADSH
Trigger: ATGCGAGTCTGCTTCCTGCCACAAATCACAATTTGA...ATGGGGTTGACAGAGAAATCTTAAAATCTGACAGGGTAGAAGAAGCACTTTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371150.5
CDS-3UTR TCA 90 bp AAAGTGCTTCTTCTACCCTGTCAGATTTTAAGATTTCTCTGTCAACCCCATCGAATTGGAGCCACTAGATaGCTCAGAAATAGTCAAGAC +
Preference number: 4 (lower is better)
Translates to: KVLLLPCQILRFLCQPHRIGATR*LRNSQD
Trigger: GTCTTGACTATTTCTGAGTCATCTAGTGGCTCCAAT...TCGATGGGGTTGACAGAGAAATCTTAAAATCTGACAGGGTAGAAGAAGCACTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR TCA 90 bp AAAGTGCTTCTTCTACCCTGTCAGATTTTAAGATTTCTCTGTCAACCCCATCGATTAACCCCAACAAACTaGAGGTTCTTTTTGGTCCCA +
Preference number: 4 (lower is better)
Translates to: KVLLLPCQILRFLCQPHRLTPTN*RFFLVP
Trigger: TGGGACCAAAAAGAACCTTCAGTTTGTTGGGGTTAA...TCGATGGGGTTGACAGAGAAATCTTAAAATCTGACAGGGTAGAAGAAGCACTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CCA 90 bp CAGGAATGTATGTGCATATTTGACATAGTTTCTTCTCTAGAAGGGTGGCTCTCTAACAAAGCTCCCAAATaGTGCTTGTTCAGTTTCACC +
Preference number: 4 (lower is better)
Translates to: QECMCIFDIVSSLEGWLSNKAPK*CLFSFT
Trigger: GGTGAAACTGAACAAGCACCATTTGGGAGCTTTGTT...AGAGAGCCACCCTTCTAGAGAAGAAACTATGTCAAATATGCACATACATTCCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR GCA 90 bp CAGGAATGTATGTGCATATTTGACATAGTTTCTTCTCTAGAAGGGTGGCTCTCTAGAAAACCTCTACTATaGAAGAACCAGAGAGGAACA +
Preference number: 4 (lower is better)
Translates to: QECMCIFDIVSSLEGWLSRKPLL*KNQRGT
Trigger: TGTTCCTCTCTGGTTCTTGCATAGTAGAGGTTTTCT...AGAGAGCCACCCTTCTAGAGAAGAAACTATGTCAAATATGCACATACATTCCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371150.5
CDS-3UTR GCA 90 bp CAGGAATGTATGTGCATATTTGACATAGTTTCTTCTCTAGAAGGGTGGCTCTCTACGTACACACACACATaGACGCAGAGAAAATATTCA +
Preference number: 4 (lower is better)
Translates to: QECMCIFDIVSSLEGWLSTYTHT*TQRKYS
Trigger: TGAATATTTTCTCTGCGTGCATGTGTGTGTGTACGT...AGAGAGCCACCCTTCTAGAGAAGAAACTATGTCAAATATGCACATACATTCCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371150.5
CDS CCA 90 bp GGTCGATGGGGAGATCTCCACTGGCGGGGAGGAGGAGGAGGCCGGTaGCTCCTTGGGTGGGTGAGCCTGGGCCGAGTAGGCCGACAGCAG +
Preference number: 5 (lower is better)
Translates to: GRWGDLHWRGGGGGR*LLGWVSLGRVGRQQ
Trigger: CTGCTGTCGGCCTACTCGGCCCAGGCTCACCCACCCAAGGAGCCACCGGCCTCCTCCTCCTCCCCGCCAGTGGAGATCTCCCCATCGACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS GCA 90 bp TGTGCGGCCAGCCTTGTCAGTCAGGCTGCTGTCGCAGGCTGGGTGTaGCAGGAGCAGCCGCACCAGGTCCACGTTGCCATGGTGACAGGC +
Preference number: 5 (lower is better)
Translates to: CAASLVSQAAVAGWV*QEQPHQVHVAMVTG
Trigger: GCCTGTCACCATGGCAACGTGGACCTGGTGCGGCTGCTCCTGGCACACCCAGCCTGCGACAGCAGCCTGACTGACAAGGCTGGCCGCACA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS GCA 90 bp CTCCTCAGAAGCCCTGCTGTGCAGCAGCGTGGCAGGCATGCTGGATaGTCTCAAGAGCTGGGGCCGTCCACTCCCAAAAGTGAGCTCGGC +
Preference number: 5 (lower is better)
Translates to: LLRSPAVQQRGRHAG*SQELGPSTPKSELG
Trigger: GCCGAGCTCACTTTTGGGAGTGGACGGCCCCAGCTCTTGAGAGCATCCAGCATGCCTGCCACGCTGCTGCACAGCAGGGCTTCTGAGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS GCA 90 bp TTGGAGGCTGGCTGCTTGATGGCGCTGGCCAGCTCCGGGTACCCATaGTCCAGGCAGTTCCACTGCTCCTGCAGGAGCTCCTGGATCTTC +
Preference number: 5 (lower is better)
Translates to: LEAGCLMALASSGYP*SRQFHCSCRSSWIF
Trigger: GAAGATCCAGGAGCTCCTGCAGGAGCAGTGGAACTGCCTGGAGCATGGGTACCCGGAGCTGGCCAGCGCCATCAAGCAGCCAGCCTCCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS GCA 90 bp ACTCTCCCTCCAGGGCCGAGACCTGCTGTTTCAGGCTGGAGATGCTaGCTGGATCCACCCTGGCAAGGCCCAGGCTTTCCTCAGTTACCC +
Preference number: 5 (lower is better)
Translates to: TLPPGPRPAVSGWRC*LDPPWQGPGFPQLP
Trigger: GGGTAACTGAGGAAAGCCTGGGCCTTGCCAGGGTGGATCCAGGCAGCATCTCCAGCCTGAAACAGCAGGTCTCGGCCCTGGAGGGAGAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS CCA 90 bp TCCCTCCAGGGCCGAGACCTGCTGTTTCAGGCTGGAGATGCTGCCTaGATCCACCCTGGCAAGGCCCAGGCTTTCCTCAGTTACCCTGAT +
Preference number: 5 (lower is better)
Translates to: SLQGRDLLFQAGDAA*IHPGKAQAFLSYPD
Trigger: ATCAGGGTAACTGAGGAAAGCCTGGGCCTTGCCAGGGTGGATCCAGGCAGCATCTCCAGCCTGAAACAGCAGGTCTCGGCCCTGGAGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS CCA 90 bp TTCCAGACAACTCTCCCTCCAGGGCCGAGACCTGCTGTTTCAGGCTaGAGATGCTGCCTGGATCCACCCTGGCAAGGCCCAGGCTTTCCT +
Preference number: 5 (lower is better)
Translates to: FQTTLPPGPRPAVSG*RCCLDPPWQGPGFP
Trigger: AGGAAAGCCTGGGCCTTGCCAGGGTGGATCCAGGCAGCATCTCCAGCCTGAAACAGCAGGTCTCGGCCCTGGAGGGAGAGTTGTCTGGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS-3UTR CAA 90 bp TTCAAGGGCGAGGGAGGAGTCCAGAGAAGAAGGCTTTTGTTCCCCACGGCCAGTGCTGTGCGGCCAGCCTaGTCAGTCAGGCTGCTGTCG +
Preference number: 5 (lower is better)
Translates to: FKGEGGVQRRRLLFPTASAVRPA*SVRLLS
Trigger: CGACAGCAGCCTGACTGACAAGGCTGGCCGCACAGC...ACTGGCCGTGGGGAACAAAAGCCTTCTTCTCTGGACTCCTCCCTCGCCCTTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CAA 90 bp GTATTGCTCTGCCCTGCCTGGGTCCCTTGCTCCTATTGCAGCCAGAAGTCCCAAGCTGTGCGGCCAGCCTaGTCAGTCAGGCTGCTGTCG +
Preference number: 5 (lower is better)
Translates to: VLLCPAWVPCSYCSQKSQAVRPA*SVRLLS
Trigger: CGACAGCAGCCTGACTGACAAGGCTGGCCGCACAGC...TTGGGACTTCTGGCTGCAATAGGAGCAAGGGACCCAGGCAGGGCAGAGCAATAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317477.8
ENST00000371153.9
CDS TCA 90 bp GCATGCTGGATGCTCTCAAGAGCTGGGGCCGTCCACTCCCAAAAGTaGGCTCGGCATCCTCTGGCTCAGCAGCTTCCAACTGTCTGGTGG +
Preference number: 5 (lower is better)
Translates to: ACWMLSRAGAVHSQK*ARHPLAQQLPTVWW
Trigger: CCACCAGACAGTTGGAAGCTGCTGAGCCAGAGGATGCCGAGCTCACTTTTGGGAGTGGACGGCCCCAGCTCTTGAGAGCATCCAGCATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS TCA 90 bp TGCCTGGATCCACCCTGGCAAGGCCCAGGCTTTCCTCAGTTACCCTaGTGCCAATGCTTCTCATGTCCACCTCTACAGGTGGCGGGGGTG +
Preference number: 5 (lower is better)
Translates to: CLDPPWQGPGFPQLP*CQCFSCPPLQVAGV
Trigger: CACCCCCGCCACCTGTAGAGGTGGACATGAGAAGCATTGGCATCAGGGTAACTGAGGAAAGCCTGGGCCTTGCCAGGGTGGATCCAGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS TCA 90 bp GCAGGGCCATTCTTGGCCCCAGACACTGCCTTTGCACAATGCAAATaGGAACAGCCCCCTCTGGGTGGATGTGGTGCTGCAGCGCAAGGC +
Preference number: 5 (lower is better)
Translates to: AGPFLAPDTAFAQCK*EQPPLGGCGAAAQG
Trigger: GCCTTGCGCTGCAGCACCACATCCACCCAGAGGGGGCTGTTCTCATTTGCATTGTGCAAAGGCAGTGTCTGGGGCCAAGAATGGCCCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371150.5
CDS GCA 90 bp ACAACTCTCCCTCCAGGGCCGAGACCTGCTGTTTCAGGCTGGAGATaGTGCCTGGATCCACCCTGGCAAGGCCCAGGCTTTCCTCAGTTA +
Preference number: 5 (lower is better)
Translates to: TTLPPGPRPAVSGWR*CLDPPWQGPGFPQL
Trigger: TAACTGAGGAAAGCCTGGGCCTTGCCAGGGTGGATCCAGGCAGCATCTCCAGCCTGAAACAGCAGGTCTCGGCCCTGGAGGGAGAGTTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS-3UTR CAA 90 bp TGGATGACACCGACGTACCCCTCACCTTGCACCTTGAACCCTGCTCTGAAGCCCCAAGTGATGCCTCCCTaGGCACCACGGGAGACCAGT +
Preference number: 5 (lower is better)
Translates to: WMTPTYPSPCTLNPALKPQVMPP*APRETS
Trigger: ACTGGTCTCCCGTGGTGCCAAGGGAGGCATCACTTG...GGGCTTCAGAGCAGGGTTCAAGGTGCAAGGTGAGGGGTACGTCGGTGTCATCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS GCA 90 bp CTCGGCATCCTCTGGCTCAGCAGCTTCCAACTGTCTGGTGGCCTCTaGCAACAGAGCCTTCCTGTGGTAGCTCACCTCACTCCTGCTTGT +
Preference number: 5 (lower is better)
Translates to: LGILWLSSFQLSGGL*QQSLPVVAHLTPAC
Trigger: ACAAGCAGGAGTGAGGTGAGCTACCACAGGAAGGCTCTGTTGGCAGAGGCCACCAGACAGTTGGAAGCTGCTGAGCCAGAGGATGCCGAG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS GCA 90 bp GGCTGGAGCTGTGGAAACCTGCCAATCCTTCTGCAGGTTCAAAGGTaGCATCACAGACACTGCCTTCACCCTGAAGGGGAGGGAGGGCAG +
Preference number: 5 (lower is better)
Translates to: GWSCGNLPILLQVQR*HHRHCLHPEGEGGQ
Trigger: CTGCCCTCCCTCCCCTTCAGGGTGAAGGCAGTGTCTGTGATGGCACCTTTGAACCTGCAGAAGGATTGGCAGGTTTCCACAGCTCCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS GCA 90 bp CTGGCCAGCTCCGGGTACCCATGCTCCAGGCAGTTCCACTGCTCCTaGAGGAGCTCCTGGATCTTCTTCACATACTGCCCAATAGTGGCA +
Preference number: 5 (lower is better)
Translates to: LASSGYPCSRQFHCS*RSSWIFFTYCPIVA
Trigger: TGCCACTATTGGGCAGTATGTGAAGAAGATCCAGGAGCTCCTGCAGGAGCAGTGGAACTGCCTGGAGCATGGGTACCCGGAGCTGGCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS GCA 90 bp ATGGCGCTGGCCAGCTCCGGGTACCCATGCTCCAGGCAGTTCCACTaGTCCTGCAGGAGCTCCTGGATCTTCTTCACATACTGCCCAATA +
Preference number: 5 (lower is better)
Translates to: MALASSGYPCSRQFH*SCRSSWIFFTYCPI
Trigger: TATTGGGCAGTATGTGAAGAAGATCCAGGAGCTCCTGCAGGAGCAGTGGAACTGCCTGGAGCATGGGTACCCGGAGCTGGCCAGCGCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS GCA 90 bp GAGGTCTGGAGTCCACGCAGCAGGGCCATTCTTGGCCCCAGACACTaGCTTTGCACAATGCAAATGAGAACAGCCCCCTCTGGGTGGATG +
Preference number: 5 (lower is better)
Translates to: EVWSPRSRAILGPRH*LCTMQMRTAPSGWM
Trigger: CATCCACCCAGAGGGGGCTGTTCTCATTTGCATTGTGCAAAGGCAGTGTCTGGGGCCAAGAATGGCCCTGCTGCGTGGACTCCAGACCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371150.5
CDS CCA 90 bp CCTGCTCCGCGTGGGCTCTCAGAAGCCCAGCAATTTCCATATGGGTaGGTGACTTCAGAGCGATGGACAAAGCTGTGCGGCCAGCCTTGT +
Preference number: 5 (lower is better)
Translates to: PAPRGLSEAQQFPYG*VTSERWTKLCGQPC
Trigger: ACAAGGCTGGCCGCACAGCTTTGTCCATCGCTCTGAAGTCACCCACCCATATGGAAATTGCTGGGCTTCTGAGAGCCCACGCGGAGCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CAA 90 bp CTTCAAGGGCGAGGGAGGAGTCCAGAGAAGAAGGCTTTTGTTCCCCACGGCCAGGACGTACCCCTCACCTaGCACCTTGAACCCTGCTCT +
Preference number: 5 (lower is better)
Translates to: LQGRGRSPEKKAFVPHGQDVPLT*HLEPCS
Trigger: AGAGCAGGGTTCAAGGTGCAAGGTGAGGGGTACGTC...CTGGCCGTGGGGAACAAAAGCCTTCTTCTCTGGACTCCTCCCTCGCCCTTGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CAA 90 bp TGTGCTGGCCCCAGGGAATATGGAAGCTTCGGAAGGTATTGCTCTGCCCTGCCTCCCTGCCTGGGTCCCTaGCTCCTATTGCAGCCAGAA +
Preference number: 5 (lower is better)
Translates to: CAGPREYGSFGRYCSALPPCLGP*LLLQPE
Trigger: TTCTGGCTGCAATAGGAGCAAGGGACCCAGGCAGGG...AGGCAGGGCAGAGCAATACCTTCCGAAGCTTCCATATTCCCTGGGGCCAGCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317477.8
ENST00000371153.9
CDS-3UTR CAA 90 bp TGGAAGCTTCGGAAGGTATTGCTCTGCCCTGCCTGGGTCCCTTGCTCCTATTGCGCTCTGGAATCCGAGTaGATGCTCGTGGGCTGGAGC +
Preference number: 5 (lower is better)
Translates to: WKLRKVLLCPAWVPCSYCALESE*MLVGWS
Trigger: GCTCCAGCCCACGAGCATCAACTCGGATTCCAGAGC...GCAATAGGAGCAAGGGACCCAGGCAGGGCAGAGCAATACCTTCCGAAGCTTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS TCA 90 bp CCCTGCCCAGCCTCGCAGGTGAGATGGGCATCTTTGACATGCTTGTaGTCTGGGCCGTCACACTTCTTCTCTGCCTCGCTGTCAGACAAG +
Preference number: 5 (lower is better)
Translates to: PCPASQVRWASLTCL*SGPSHFFSASLSDK
Trigger: CTTGTCTGACAGCGAGGCAGAGAAGAAGTGTGACGGCCCAGATCACAAGCATGTCAAAGATGCCCATCTCACCTGCGAGGCTGGGCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS GCA 90 bp CGTCACACTTCTTCTCTGCCTCGCTGTCAGACAAGTCCTCTGGGGTaGTGTCCTCACCGCTGGTCTCCTCACTTGAGGTGGTCTCATACC +
Preference number: 5 (lower is better)
Translates to: RHTSSLPRCQTSPLG*CPHRWSPHLRWSHT
Trigger: GGTATGAGACCACCTCAAGTGAGGAGACCAGCGGTGAGGACAGCACCCCAGAGGACTTGTCTGACAGCGAGGCAGAGAAGAAGTGTGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS GCA 90 bp CTGAGTTCAGTGGAGAGGAAGCTATGTACAGAGGAGGTAAGGACCTaGTCGGGTCCCTGTGGCAGTGACAGCTGGGGCAGAAGCACACGT +
Preference number: 5 (lower is better)
Translates to: LSSVERKLCTEEVRT*SGPCGSDSWGRSTR
Trigger: ACGTGTGCTTCTGCCCCAGCTGTCACTGCCACAGGGACCCGAGCAGGTCCTTACCTCCTCTGTACATAGCTTCCTCTCCACTGAACTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS CCA 90 bp CTCCCTCCTGGACCAGCTCTGGAATCCGAGTTGATGCTCGTGGGCTaGAGCTGTGGAAACCTGCCAATCCTTCTGCAGGTTCAAAGGTGC +
Preference number: 5 (lower is better)
Translates to: LPPGPALESELMLVG*SCGNLPILLQVQRC
Trigger: GCACCTTTGAACCTGCAGAAGGATTGGCAGGTTTCCACAGCTCCAGCCCACGAGCATCAACTCGGATTCCAGAGCTGGTCCAGGAGGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS CCA 90 bp GAGCTCCTGGATCTTCTTCACATACTGCCCAATAGTGGCATCCGTTaGCGAGCTTGGTGGCCTTCCCGGGTGCTCCTTCCCTGGGAGATT +
Preference number: 5 (lower is better)
Translates to: ELLDLLHILPNSGIR*RAWWPSRVLLPWEI
Trigger: AATCTCCCAGGGAAGGAGCACCCGGGAAGGCCACCAAGCTCGCCAACGGATGCCACTATTGGGCAGTATGTGAAGAAGATCCAGGAGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS CCA 90 bp CTGGGTGGATGTGGTGCTGCAGCGCAAGGCTTGGCAAATGGAGTGTaGGCTGGCTTTCAACTCTCATTTGCCCTCCCTGGCTGGCATCTT +
Preference number: 5 (lower is better)
Translates to: LGGCGAAAQGLANGV*AGFQLSFALPGWHL
Trigger: AAGATGCCAGCCAGGGAGGGCAAATGAGAGTTGAAAGCCAGCCCACACTCCATTTGCCAAGCCTTGCGCTGCAGCACCACATCCACCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371150.5
CDS-3UTR CAA 90 bp ACCAGTCTGCACGGTGATTCTTCTAGGGTCCCCTACAGAATGCTTGCCAGGGGGGCAGCTAAGCAGCGCTaGAACCATGTCCTCCCTGTC +
Preference number: 5 (lower is better)
Translates to: TSLHGDSSRVPYRMLARGAAKQR*NHVLPV
Trigger: GACAGGGAGGACATGGTTCAAGCGCTGCTTAGCTGC...CCCCCTGGCAAGCATTCTGTAGGGGACCCTAGAAGAATCACCGTGCAGACTGGT
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CAA 90 bp TGCCCTCTTCAAGGGCGAGGGAGGAGTCCAGAGAAGAAGGCTTTTGTTCCCCACGCAGCTAAGCAGCGCTaGAACCATGTCCTCCCTGTC +
Preference number: 5 (lower is better)
Translates to: CPLQGRGRSPEKKAFVPHAAKQR*NHVLPV
Trigger: GACAGGGAGGACATGGTTCAAGCGCTGCTTAGCTGC...GTGGGGAACAAAAGCCTTCTTCTCTGGACTCCTCCCTCGCCCTTGAAGAGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CAA 90 bp TTCAAGGGCGAGGGAGGAGTCCAGAGAAGAAGGCTTTTGTTCCCCACGGCCAGTCGCTGGTCTCCTCACTaGAGGTGGTCTCATACCCAC +
Preference number: 5 (lower is better)
Translates to: FKGEGGVQRRRLLFPTASRWSPH*RWSHTH
Trigger: GTGGGTATGAGACCACCTCAAGTGAGGAGACCAGCG...ACTGGCCGTGGGGAACAAAAGCCTTCTTCTCTGGACTCCTCCCTCGCCCTTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CAA 90 bp TGGATGACACCGACGTACCCCTCACCTTGCACCTTGAACCCTGCTCTGAAGCCCGGAGAGGGAGGTGATTaGGAACCTTCACCACACCCT +
Preference number: 5 (lower is better)
Translates to: WMTPTYPSPCTLNPALKPGEGGD*EPSPHP
Trigger: AGGGTGTGGTGAAGGTTCCAAATCACCTCCCTCTCC...GGGCTTCAGAGCAGGGTTCAAGGTGCAAGGTGAGGGGTACGTCGGTGTCATCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS GCA 90 bp GGCATCTTTGACATGCTTGTGATCTGGGCCGTCACACTTCTTCTCTaGCTCGCTGTCAGACAAGTCCTCTGGGGTGCTGTCCTCACCGCT +
Preference number: 5 (lower is better)
Translates to: GIFDMLVIWAVTLLL*LAVRQVLWGAVLTA
Trigger: AGCGGTGAGGACAGCACCCCAGAGGACTTGTCTGACAGCGAGGCAGAGAAGAAGTGTGACGGCCCAGATCACAAGCATGTCAAAGATGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS CCA 90 bp TCAGAAGCCCAGCAATTTCCATATGGGTGGGTGACTTCAGAGCGATaGACAAAGCTGTGCGGCCAGCCTTGTCAGTCAGGCTGCTGTCGC +
Preference number: 5 (lower is better)
Translates to: SEAQQFPYGWVTSER*TKLCGQPCQSGCCR
Trigger: GCGACAGCAGCCTGACTGACAAGGCTGGCCGCACAGCTTTGTCCATCGCTCTGAAGTCACCCACCCATATGGAAATTGCTGGGCTTCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS CCA 90 bp CCCAGCCTCGCAGGTGAGATGGGCATCTTTGACATGCTTGTGATCTaGGCCGTCACACTTCTTCTCTGCCTCGCTGTCAGACAAGTCCTC +
Preference number: 5 (lower is better)
Translates to: PSLAGEMGIFDMLVI*AVTLLLCLAVRQVL
Trigger: GAGGACTTGTCTGACAGCGAGGCAGAGAAGAAGTGTGACGGCCCAGATCACAAGCATGTCAAAGATGCCCATCTCACCTGCGAGGCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS CCA 90 bp TGCCTTTGCACAATGCAAATGAGAACAGCCCCCTCTGGGTGGATGTaGTGCTGCAGCGCAAGGCTTGGCAAATGGAGTGTGGGCTGGCTT +
Preference number: 5 (lower is better)
Translates to: CLCTMQMRTAPSGWM*CCSARLGKWSVGWL
Trigger: AAGCCAGCCCACACTCCATTTGCCAAGCCTTGCGCTGCAGCACCACATCCACCCAGAGGGGGCTGTTCTCATTTGCATTGTGCAAAGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371150.5
CDS CCA 90 bp AGACACTGCCTTTGCACAATGCAAATGAGAACAGCCCCCTCTGGGTaGATGTGGTGCTGCAGCGCAAGGCTTGGCAAATGGAGTGTGGGC +
Preference number: 5 (lower is better)
Translates to: RHCLCTMQMRTAPSG*MWCCSARLGKWSVG
Trigger: GCCCACACTCCATTTGCCAAGCCTTGCGCTGCAGCACCACATCCACCCAGAGGGGGCTGTTCTCATTTGCATTGTGCAAAGGCAGTGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371150.5
CDS CCA 90 bp CCCCAGACACTGCCTTTGCACAATGCAAATGAGAACAGCCCCCTCTaGGTGGATGTGGTGCTGCAGCGCAAGGCTTGGCAAATGGAGTGT +
Preference number: 5 (lower is better)
Translates to: PQTLPLHNANENSPL*VDVVLQRKAWQMEC
Trigger: ACACTCCATTTGCCAAGCCTTGCGCTGCAGCACCACATCCACCCAGAGGGGGCTGTTCTCATTTGCATTGTGCAAAGGCAGTGTCTGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371150.5
CDS CCA 90 bp AAAAGCCCAGGAAGAGGTCTGGAGTCCACGCAGCAGGGCCATTCTTaGCCCCAGACACTGCCTTTGCACAATGCAAATGAGAACAGCCCC +
Preference number: 5 (lower is better)
Translates to: KSPGRGLESTQQGHS*PQTLPLHNANENSP
Trigger: GGGGCTGTTCTCATTTGCATTGTGCAAAGGCAGTGTCTGGGGCCAAGAATGGCCCTGCTGCGTGGACTCCAGACCTCTTCCTGGGCTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371150.5
CDS CCA 90 bp AGAACCAGAGAGGAACACAGGAATGCAAAAGCCCAGGAAGAGGTCTaGAGTCCACGCAGCAGGGCCATTCTTGGCCCCAGACACTGCCTT +
Preference number: 5 (lower is better)
Translates to: RTREEHRNAKAQEEV*SPRSRAILGPRHCL
Trigger: AAGGCAGTGTCTGGGGCCAAGAATGGCCCTGCTGCGTGGACTCCAGACCTCTTCCTGGGCTTTTGCATTCCTGTGTTCCTCTCTGGTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371150.5
CDS-3UTR CAA 90 bp GACACCGACGTACCCCTCACCTTGCACCTTGAACCCTGCTCTGAAGCCCGTGTAGACGCGGAACCACTCTaGACTGATGGTGTTCAAGCT +
Preference number: 5 (lower is better)
Translates to: DTDVPLTLHLEPCSEARVDAEPL*TDGVQA
Trigger: AGCTTGAACACCATCAGTCAAGAGTGGTTCCGCGTC...TACACGGGCTTCAGAGCAGGGTTCAAGGTGCAAGGTGAGGGGTACGTCGGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CAA 90 bp GACACCGACGTACCCCTCACCTTGCACCTTGAACCCTGCTCTGAAGCCCGTGTAACAGCCATGTCTTCATaGGTCTCTGCGGAAGCCAAG +
Preference number: 5 (lower is better)
Translates to: DTDVPLTLHLEPCSEARVTAMSS*VSAEAK
Trigger: CTTGGCTTCCGCAGAGACCAATGAAGACATGGCTGT...TACACGGGCTTCAGAGCAGGGTTCAAGGTGCAAGGTGAGGGGTACGTCGGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CAA 90 bp TTCAAGGGCGAGGGAGGAGTCCAGAGAAGAAGGCTTTTGTTCCCCACGGCCAGTTCGTGGTCCTGCAGATaGACATCTGCCTGGCAGCTA +
Preference number: 5 (lower is better)
Translates to: FKGEGGVQRRRLLFPTASSWSCR*TSAWQL
Trigger: TAGCTGCCAGGCAGATGTCAATCTGCAGGACCACGA...ACTGGCCGTGGGGAACAAAAGCCTTCTTCTCTGGACTCCTCCCTCGCCCTTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CAA 90 bp GCTCCCAAATGGTGCTTGTTCAGTTTCACCAGTCTGCACGGTGATTCTTCTAGGGCTGTGCGGCCAGCCTaGTCAGTCAGGCTGCTGTCG +
Preference number: 5 (lower is better)
Translates to: APKWCLFSFTSLHGDSSRAVRPA*SVRLLS
Trigger: CGACAGCAGCCTGACTGACAAGGCTGGCCGCACAGC...CCTAGAAGAATCACCGTGCAGACTGGTGAAACTGAACAAGCACCATTTGGGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CAA 90 bp GACACCGACGTACCCCTCACCTTGCACCTTGAACCCTGCTCTGAAGCCCGTGTACTCCTGCCTGCCTGCTaGCTACACAATGTTACAGAG +
Preference number: 5 (lower is better)
Translates to: DTDVPLTLHLEPCSEARVLLPAC*LHNVTE
Trigger: CTCTGTAACATTGTGTAGCAAGCAGGCAGGCAGGAG...TACACGGGCTTCAGAGCAGGGTTCAAGGTGCAAGGTGAGGGGTACGTCGGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CAA 90 bp CTTCAAGGGCGAGGGAGGAGTCCAGAGAAGAAGGCTTTTGTTCCCCACGGCCAGTCCCCTACAGAATGCTaGCCAGGGGGTTGGCTTAAA +
Preference number: 5 (lower is better)
Translates to: LQGRGRSPEKKAFVPHGQSPTEC*PGGWLK
Trigger: TTTAAGCCAACCCCCTGGCAAGCATTCTGTAGGGGA...CTGGCCGTGGGGAACAAAAGCCTTCTTCTCTGGACTCCTCCCTCGCCCTTGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CAA 90 bp TGGCCTGTGACCTCTGCCCTCTTCAAGGGCGAGGGAGGAGTCCAGAGAAGAAGGGCTCCCAAATGGTGCTaGTTCAGTTTCACCAGTCTG +
Preference number: 5 (lower is better)
Translates to: WPVTSALFKGEGGVQRRRAPKWC*FSFTSL
Trigger: CAGACTGGTGAAACTGAACAAGCACCATTTGGGAGC...CCTTCTTCTCTGGACTCCTCCCTCGCCCTTGAAGAGGGCAGAGGTCACAGGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CAA 90 bp CTTCAAGGGCGAGGGAGGAGTCCAGAGAAGAAGGCTTTTGTTCCCCACGGCCAGGGTCCCTTGCTCCTATaGCAGCCAGAAGTCCCAAAA +
Preference number: 5 (lower is better)
Translates to: LQGRGRSPEKKAFVPHGQGPLLL*QPEVPK
Trigger: TTTTGGGACTTCTGGCTGCAATAGGAGCAAGGGACC...CTGGCCGTGGGGAACAAAAGCCTTCTTCTCTGGACTCCTCCCTCGCCCTTGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317477.8
ENST00000371153.9
CDS-3UTR CAA 90 bp TGGCCTGTGACCTCTGCCCTCTTCAAGGGCGAGGGAGGAGTCCAGAGAAGAAGGGTCTTTGGCGTTCTCTaGGTGAAACTGTCCTTCCAG +
Preference number: 5 (lower is better)
Translates to: WPVTSALFKGEGGVQRRRVFGVL*VKLSFQ
Trigger: CTGGAAGGACAGTTTCACCAAGAGAACGCCAAAGAC...CCTTCTTCTCTGGACTCCTCCCTCGCCCTTGAAGAGGGCAGAGGTCACAGGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS-3UTR CAA 90 bp TTGCTCTGCCCTGCCTGGGTCCCTTGCTCCTATTGCAGCCAGAAGTCCCAAAAATGGATGCTGCTGAGCTaGGAGGCTGGCTGCTTGATG +
Preference number: 5 (lower is better)
Translates to: LLCPAWVPCSYCSQKSQKWMLLS*EAGCLM
Trigger: CATCAAGCAGCCAGCCTCCAAGCTCAGCAGCATCCA...TTTTTGGGACTTCTGGCTGCAATAGGAGCAAGGGACCCAGGCAGGGCAGAGCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS-3UTR CAA 90 bp CTGCCCTCTTCAAGGGCGAGGGAGGAGTCCAGAGAAGAAGGCTTTTGTTCCCCACCCTGGCTGGCATCTTaGTGCCCTGTGCTATCCATA +
Preference number: 5 (lower is better)
Translates to: LPSSRAREESREEGFCSPPWLAS*CPVLSI
Trigger: TATGGATAGCACAGGGCACAAAGATGCCAGCCAGGG...TGGGGAACAAAAGCCTTCTTCTCTGGACTCCTCCCTCGCCCTTGAAGAGGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371150.5
CDS-3UTR CAA 90 bp CTGCCCTCTTCAAGGGCGAGGGAGGAGTCCAGAGAAGAAGGCTTTTGTTCCCCAGCTTTCAACTCTCATTaGCCCTCCCTGGCTGGCATC +
Preference number: 5 (lower is better)
Translates to: LPSSRAREESREEGFCSPAFNSH*PSLAGI
Trigger: GATGCCAGCCAGGGAGGGCAAATGAGAGTTGAAAGC...TGGGGAACAAAAGCCTTCTTCTCTGGACTCCTCCCTCGCCCTTGAAGAGGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371150.5
CDS GCA 90 bp CTTTGCACAATGCAAATGAGAACAGCCCCCTCTGGGTGGATGTGGTaGTGCAGCGCAAGGCTTGGCAAATGGAGTGTGGGCTGGCTTTCA +
Preference number: 5 (lower is better)
Translates to: LCTMQMRTAPSGWMW*CSARLGKWSVGWLS
Trigger: TGAAAGCCAGCCCACACTCCATTTGCCAAGCCTTGCGCTGCAGCACCACATCCACCCAGAGGGGGCTGTTCTCATTTGCATTGTGCAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371150.5
CDS CCA 90 bp TGGACCAGCTCTGGAATCCGAGTTGATGCTCGTGGGCTGGAGCTGTaGAAACCTGCCAATCCTTCTGCAGGTTCAAAGGTGCCATCACAG +
Preference number: 5 (lower is better)
Translates to: WTSSGIRVDARGLEL*KPANPSAGSKVPSQ
Trigger: CTGTGATGGCACCTTTGAACCTGCAGAAGGATTGGCAGGTTTCCACAGCTCCAGCCCACGAGCATCAACTCGGATTCCAGAGCTGGTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS CCA 90 bp CCTGATGCCAATGCTTCTCATGTCCACCTCTACAGGTGGCGGGGGTaGAATCTCGCTGATGTTGAGCTCGATTTCTTCCAGGAGGAGCTC +
Preference number: 5 (lower is better)
Translates to: PDANASHVHLYRWRG*NLADVELDFFQEEL
Trigger: GAGCTCCTCCTGGAAGAAATCGAGCTCAACATCAGCGAGATTCCACCCCCGCCACCTGTAGAGGTGGACATGAGAAGCATTGGCATCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS CCA 90 bp CTGGACTCATGGTCTAGCACCCACTTCTGCTCAAGGGCACCTCAGTaGTCCTTCCTGGCTCACAAGTGCATACTGACACTAGGGTTGTGG +
Preference number: 5 (lower is better)
Translates to: LDSWSSTHFCSRAPQ*SFLAHKCILTLGLW
Trigger: CCACAACCCTAGTGTCAGTATGCACTTGTGAGCCAGGAAGGACCACTGAGGTGCCCTTGAGCAGAAGTGGGTGCTAGACCATGAGTCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371150.5
CDS-3UTR CAA 90 bp CTGCCCTCTTCAAGGGCGAGGGAGGAGTCCAGAGAAGAAGGCTTTTGTTCCCCAGACGCGGAACCACTCTaGACTGATGGTGTTCAAGCT +
Preference number: 5 (lower is better)
Translates to: LPSSRAREESREEGFCSPDAEPL*TDGVQA
Trigger: AGCTTGAACACCATCAGTCAAGAGTGGTTCCGCGTC...TGGGGAACAAAAGCCTTCTTCTCTGGACTCCTCCCTCGCCCTTGAAGAGGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CAA 90 bp GATGAAATTGCGGCCCAAGGAGGTTTCATGACTCACCACAGGGGCACCCAGCAATCGTGGTCCTGCAGATaGACATCTGCCTGGCAGCTA +
Preference number: 5 (lower is better)
Translates to: DEIAAQGGFMTHHRGTQQSWSCR*TSAWQL
Trigger: TAGCTGCCAGGCAGATGTCAATCTGCAGGACCACGA...TTGCTGGGTGCCCCTGTGGTGAGTCATGAAACCTCCTTGGGCCGCAATTTCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317477.8
ENST00000371153.9
CDS-3UTR CAA 90 bp GGAGGAGTCCAGAGAAGAAGGCTTTTGTTCCCCACGGCCAGTTCTTCTGCAGCCCAGAGAAGAAGGCTTTaGTTCCCCACGGCCAGTTCT +
Preference number: 5 (lower is better)
Translates to: GGVQRRRLLFPTASSSAAQRRRL*FPTASS
Trigger: AGAACTGGCCGTGGGGAACAAAAGCCTTCTTCTCTG...GGCTGCAGAAGAACTGGCCGTGGGGAACAAAAGCCTTCTTCTCTGGACTCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CAA 90 bp TGGCCTGTGACCTCTGCCCTCTTCAAGGGCGAGGGAGGAGTCCAGAGAAGAAGGTTTCCCTGGAGCAAATaGGAGCCACTAGATGACTCA +
Preference number: 5 (lower is better)
Translates to: WPVTSALFKGEGGVQRRRFPWSK*EPLDDS
Trigger: TGAGTCATCTAGTGGCTCCAATTTGCTCCAGGGAAA...CCTTCTTCTCTGGACTCCTCCCTCGCCCTTGAAGAGGGCAGAGGTCACAGGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CAA 90 bp CTGCCCTCTTCAAGGGCGAGGGAGGAGTCCAGAGAAGAAGGCTTTTGTTCCCCATTATATCTCTCGGCCTaGGAGTGGGGGACTTCTTCC +
Preference number: 5 (lower is better)
Translates to: LPSSRAREESREEGFCSPLYLSA*EWGTSS
Trigger: GGAAGAAGTCCCCCACTCCAAGGCCGAGAGATATAA...TGGGGAACAAAAGCCTTCTTCTCTGGACTCCTCCCTCGCCCTTGAAGAGGGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CAA 90 bp TGGATGACACCGACGTACCCCTCACCTTGCACCTTGAACCCTGCTCTGAAGCCCCTAAATTTGGCCTGCTaGGCCCTTCTGTGGATAGGA +
Preference number: 5 (lower is better)
Translates to: WMTPTYPSPCTLNPALKPLNLAC*ALLWIG
Trigger: TCCTATCCACAGAAGGGCCAAGCAGGCCAAATTTAG...GGGCTTCAGAGCAGGGTTCAAGGTGCAAGGTGAGGGGTACGTCGGTGTCATCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS-3UTR CAA 90 bp GGTGCTTGTTCAGTTTCACCAGTCTGCACGGTGATTCTTCTAGGGTCCCCTACAGCAGCAGGGCCATTCTaGGCCCCAGACACTGCCTTT +
Preference number: 5 (lower is better)
Translates to: GACSVSPVCTVILLGSPTAAGPF*APDTAF
Trigger: AAAGGCAGTGTCTGGGGCCAAGAATGGCCCTGCTGC...TGTAGGGGACCCTAGAAGAATCACCGTGCAGACTGGTGAAACTGAACAAGCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371150.5
CDS-3UTR CAA 90 bp CTTCAAGGGCGAGGGAGGAGTCCAGAGAAGAAGGCTTTTGTTCCCCACGGCCAGAACCAGGATATTGCTTaGAGGGGACAAGGGTTGCAG +
Preference number: 5 (lower is better)
Translates to: LQGRGRSPEKKAFVPHGQNQDIA*RGQGLQ
Trigger: CTGCAACCCTTGTCCCCTCAAAGCAATATCCTGGTT...CTGGCCGTGGGGAACAAAAGCCTTCTTCTCTGGACTCCTCCCTCGCCCTTGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371150.5
CDS TCA 90 bp CTCCTCGGTGCCCCCAGCTTTCAGACTCCATGCTGCCTAGAAGGTTaGCTTCAATGCCCTTATCACACGACTCCCTGGTCAAGAGTCCAT +
Preference number: 5 (lower is better)
Translates to: LLGAPSFQTPCCLEG*LQCPYHTTPWSRVH
Trigger: ATGGACTCTTGACCAGGGAGTCGTGTGATAAGGGCATTGAAGTCAACCTTCTAGGCAGCATGGAGTCTGAAAGCTGGGGGCACCGAGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS GCA 90 bp TGCTCCCCTGGTTCCTCCCTGAGGGCCTCCTTCCTGTTCAGTGCCTaGTTCTTCAATCCTGAGTTCAGTGGAGAGGAAGCTATGTACAGA +
Preference number: 5 (lower is better)
Translates to: CSPGSSLRASFLFSA*FFNPEFSGEEAMYR
Trigger: TCTGTACATAGCTTCCTCTCCACTGAACTCAGGATTGAAGAAGCAGGCACTGAACAGGAAGGAGGCCCTCAGGGAGGAACCAGGGGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS GCA 90 bp GCAAGGCTTGGCAAATGGAGTGTGGGCTGGCTTTCAACTCTCATTTaGCCTCCCTGGCTGGCATCTTTGTGCCCTGTGCTATCCATACAG +
Preference number: 5 (lower is better)
Translates to: ARLGKWSVGWLSTLI*PPWLASLCPVLSIQ
Trigger: CTGTATGGATAGCACAGGGCACAAAGATGCCAGCCAGGGAGGGCAAATGAGAGTTGAAAGCCAGCCCACACTCCATTTGCCAAGCCTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371150.5
CDS-3UTR CAA 90 bp GACACCGACGTACCCCTCACCTTGCACCTTGAACCCTGCTCTGAAGCCCGTGTAGCCTCCCTGAGTAGCTaGAATGTTCACATTTCCTTC +
Preference number: 5 (lower is better)
Translates to: DTDVPLTLHLEPCSEARVASLSS*NVHISF
Trigger: GAAGGAAATGTGAACATTCAAGCTACTCAGGGAGGC...TACACGGGCTTCAGAGCAGGGTTCAAGGTGCAAGGTGAGGGGTACGTCGGTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CAA 90 bp TTTGGATGTTTGGATGACACCGACGTACCCCTCACCTTGCACCTTGAACCCTGCTCGTGGTCCTGCAGATaGACATCTGCCTGGCAGCTA +
Preference number: 5 (lower is better)
Translates to: FGCLDDTDVPLTLHLEPCSWSCR*TSAWQL
Trigger: TAGCTGCCAGGCAGATGTCAATCTGCAGGACCACGA...GCAGGGTTCAAGGTGCAAGGTGAGGGGTACGTCGGTGTCATCCAAACATCCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CAA 90 bp GGTGCTTGTTCAGTTTCACCAGTCTGCACGGTGATTCTTCTAGGGTCCCCTACAGACGTACCCCTCACCTaGCACCTTGAACCCTGCTCT +
Preference number: 5 (lower is better)
Translates to: GACSVSPVCTVILLGSPTDVPLT*HLEPCS
Trigger: AGAGCAGGGTTCAAGGTGCAAGGTGAGGGGTACGTC...TGTAGGGGACCCTAGAAGAATCACCGTGCAGACTGGTGAAACTGAACAAGCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CAA 90 bp TGCCCTCTTCAAGGGCGAGGGAGGAGTCCAGAGAAGAAGGCTTTTGTTCCCCACGCTCCCAAATGGTGCTaGTTCAGTTTCACCAGTCTG +
Preference number: 5 (lower is better)
Translates to: CPLQGRGRSPEKKAFVPHAPKWC*FSFTSL
Trigger: CAGACTGGTGAAACTGAACAAGCACCATTTGGGAGC...GTGGGGAACAAAAGCCTTCTTCTCTGGACTCCTCCCTCGCCCTTGAAGAGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CAA 90 bp GACACCGACGTACCCCTCACCTTGCACCTTGAACCCTGCTCTGAAGCCCGTGTATTTCCCTGGAGCAAATaGGAGCCACTAGATGACTCA +
Preference number: 5 (lower is better)
Translates to: DTDVPLTLHLEPCSEARVFPWSK*EPLDDS
Trigger: TGAGTCATCTAGTGGCTCCAATTTGCTCCAGGGAAA...TACACGGGCTTCAGAGCAGGGTTCAAGGTGCAAGGTGAGGGGTACGTCGGTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CAA 90 bp GTATTGCTCTGCCCTGCCTGGGTCCCTTGCTCCTATTGCAGCCAGAAGTCCCAAGGAATCTCGCTGATGTaGAGCTCGATTTCTTCCAGG +
Preference number: 5 (lower is better)
Translates to: VLLCPAWVPCSYCSQKSQGISLM*SSISSR
Trigger: CCTGGAAGAAATCGAGCTCAACATCAGCGAGATTCC...TTGGGACTTCTGGCTGCAATAGGAGCAAGGGACCCAGGCAGGGCAGAGCAATAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS-3UTR CAA 90 bp TGCCCTCTTCAAGGGCGAGGGAGGAGTCCAGAGAAGAAGGCTTTTGTTCCCCACGCAAGGACACAGATCTaGCAATGTGCTCAACAGGAC +
Preference number: 5 (lower is better)
Translates to: CPLQGRGRSPEKKAFVPHARTQI*QCAQQD
Trigger: GTCCTGTTGAGCACATTGCAAGATCTGTGTCCTTGC...GTGGGGAACAAAAGCCTTCTTCTCTGGACTCCTCCCTCGCCCTTGAAGAGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371150.5
CDS GCA 90 bp CTTTGCCTCAAGAGCTGGTCTGTGGTGGTCCCAGTTTCTGGCAGATaGTGGCTCAGTGCCCGGCATGCATTAAGAAATTCTTCTGAGGGT +
Preference number: 5 (lower is better)
Translates to: LCLKSWSVVVPVSGR*WLSARHALRNSSEG
Trigger: ACCCTCAGAAGAATTTCTTAATGCATGCCGGGCACTGAGCCAGCATCTGCCAGAAACTGGGACCACCACAGACCAGCTCTTGAGGCAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS GCA 90 bp TCAGCCGAAGGGCCCATTTCCATATGTGAGCAGCACTTAATCTCCTaGCCCTGTACACACACACATGCACGTACACACACACATGCACGC +
Preference number: 5 (lower is better)
Translates to: SAEGPISICEQHLIS*PCTHTHARTHTHAR
Trigger: GCGTGCATGTGTGTGTGTACGTGCATGTGTGTGTGTACAGGGGCAGGAGATTAAGTGCTGCTCACATATGGAAATGGGCCCTTCGGCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371150.5
CDS GCA 90 bp CATTGTTGTCCCTGTCTTACAGCTGGGAAATCTGAGGCCCAGACTTaGTCAGTGAATGGGAGTGTAGGAGCAGAACGTAGGCCTCTGGAC +
Preference number: 5 (lower is better)
Translates to: HCCPCLTAGKSEAQT*SVNGSVGAERRPLD
Trigger: GTCCAGAGGCCTACGTTCTGCTCCTACACTCCCATTCACTGAGCAAGTCTGGGCCTCAGATTTCCCAGCTGTAAGACAGGGACAACAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371150.5
CDS CCA 90 bp CTCAGTTACCCTGATGCCAATGCTTCTCATGTCCACCTCTACAGGTaGCGGGGGTGGAATCTCGCTGATGTTGAGCTCGATTTCTTCCAG +
Preference number: 5 (lower is better)
Translates to: LSYPDANASHVHLYR*RGWNLADVELDFFQ
Trigger: CTGGAAGAAATCGAGCTCAACATCAGCGAGATTCCACCCCCGCCACCTGTAGAGGTGGACATGAGAAGCATTGGCATCAGGGTAACTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS-3UTR CAA 90 bp ACCAGTCTGCACGGTGATTCTTCTAGGGTCCCCTACAGAATGCTTGCCAGGGGGGCCTCCCTGAGTAGCTaGAATGTTCACATTTCCTTC +
Preference number: 5 (lower is better)
Translates to: TSLHGDSSRVPYRMLARGASLSS*NVHISF
Trigger: GAAGGAAATGTGAACATTCAAGCTACTCAGGGAGGC...CCCCCTGGCAAGCATTCTGTAGGGGACCCTAGAAGAATCACCGTGCAGACTGGT
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CAA 90 bp TTCAAGGGCGAGGGAGGAGTCCAGAGAAGAAGGCTTTTGTTCCCCACGGCCAGTGCCTCCCTGAGTAGCTaGAATGTTCACATTTCCTTC +
Preference number: 5 (lower is better)
Translates to: FKGEGGVQRRRLLFPTASASLSS*NVHISF
Trigger: GAAGGAAATGTGAACATTCAAGCTACTCAGGGAGGC...ACTGGCCGTGGGGAACAAAAGCCTTCTTCTCTGGACTCCTCCCTCGCCCTTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CAA 90 bp GCTCCCAAATGGTGCTTGTTCAGTTTCACCAGTCTGCACGGTGATTCTTCTAGGGCAGCTAAGCAGCGCTaGAACCATGTCCTCCCTGTC +
Preference number: 5 (lower is better)
Translates to: APKWCLFSFTSLHGDSSRAAKQR*NHVLPV
Trigger: GACAGGGAGGACATGGTTCAAGCGCTGCTTAGCTGC...CCTAGAAGAATCACCGTGCAGACTGGTGAAACTGAACAAGCACCATTTGGGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CAA 90 bp GTATTGCTCTGCCCTGCCTGGGTCCCTTGCTCCTATTGCAGCCAGAAGTCCCAAAGATGTTTTGGATGTTaGGATGACACCGACGTACCC +
Preference number: 5 (lower is better)
Translates to: VLLCPAWVPCSYCSQKSQRCFGC*DDTDVP
Trigger: GGGTACGTCGGTGTCATCCAAACATCCAAAACATCT...TTGGGACTTCTGGCTGCAATAGGAGCAAGGGACCCAGGCAGGGCAGAGCAATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317477.8
ENST00000371153.9
CDS-3UTR CAA 90 bp TTTGGATGTTTGGATGACACCGACGTACCCCTCACCTTGCACCTTGAACCCTGCTCCCCTACAGAATGCTaGCCAGGGGGTTGGCTTAAA +
Preference number: 5 (lower is better)
Translates to: FGCLDDTDVPLTLHLEPCSPTEC*PGGWLK
Trigger: TTTAAGCCAACCCCCTGGCAAGCATTCTGTAGGGGA...GCAGGGTTCAAGGTGCAAGGTGAGGGGTACGTCGGTGTCATCCAAACATCCAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CAA 90 bp GACACCGACGTACCCCTCACCTTGCACCTTGAACCCTGCTCTGAAGCCCGTGTATATGCAGGTGGCTTCTaGATGACAATAACCCATCCT +
Preference number: 5 (lower is better)
Translates to: DTDVPLTLHLEPCSEARVYAGGF*MTITHP
Trigger: AGGATGGGTTATTGTCATCAAGAAGCCACCTGCATA...TACACGGGCTTCAGAGCAGGGTTCAAGGTGCAAGGTGAGGGGTACGTCGGTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317477.8
ENST00000371153.9
CDS-3UTR CAA 90 bp TGGATGACACCGACGTACCCCTCACCTTGCACCTTGAACCCTGCTCTGAAGCCCTATGCAGGTGGCTTCTaGATGACAATAACCCATCCT +
Preference number: 5 (lower is better)
Translates to: WMTPTYPSPCTLNPALKPYAGGF*MTITHP
Trigger: AGGATGGGTTATTGTCATCAAGAAGCCACCTGCATA...GGGCTTCAGAGCAGGGTTCAAGGTGCAAGGTGAGGGGTACGTCGGTGTCATCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317477.8
ENST00000371153.9
CDS-3UTR CAA 90 bp TTTCATGACTCACCACAGGGGCACCCAGCAAATTGGCATCTGAGCCAAAATGAGAAGCTTCGGAAGGTATaGCTCTGCCCTGCCTGGGTC +
Preference number: 5 (lower is better)
Translates to: FHDSPQGHPANWHLSQNEKLRKV*LCPAWV
Trigger: GACCCAGGCAGGGCAGAGCAATACCTTCCGAAGCTT...CTCATTTTGGCTCAGATGCCAATTTGCTGGGTGCCCCTGTGGTGAGTCATGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317477.8
ENST00000371153.9
CDS-3UTR CAA 90 bp TGGAAGCTTCGGAAGGTATTGCTCTGCCCTGCCTGGGTCCCTTGCTCCTATTGCTCTGCTTCTCTGGCATaGTGTTCATCTTCCTTGTCC +
Preference number: 5 (lower is better)
Translates to: WKLRKVLLCPAWVPCSYCSASLA*CSSSLS
Trigger: GGACAAGGAAGATGAACACAATGCCAGAGAAGCAGA...GCAATAGGAGCAAGGGACCCAGGCAGGGCAGAGCAATACCTTCCGAAGCTTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS-3UTR CAA 90 bp AAGGATAGGCCAGAGGCTTGCTACTCAAAGTGTGGTTGTGGCTCGATAGCATCATCCTTCCCTGGGAGATaGGAACTGGTCTCCTCCCTC +
Preference number: 5 (lower is better)
Translates to: KDRPEACYSKCGCGSIASSFPGR*ELVSSL
Trigger: GAGGGAGGAGACCAGTTCCAATCTCCCAGGGAAGGA...TGATGCTATCGAGCCACAACCACACTTTGAGTAGCAAGCCTCTGGCCTATCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS-3UTR CAA 90 bp TGCCCTCTTCAAGGGCGAGGGAGGAGTCCAGAGAAGAAGGCTTTTGTTCCCCACCATCAACACATGTCATaGTGTTCTGGGACTCTGAGC +
Preference number: 5 (lower is better)
Translates to: CPLQGRGRSPEKKAFVPHHQHMS*CSGTLS
Trigger: GCTCAGAGTCCCAGAACACAATGACATGTGTTGATG...GTGGGGAACAAAAGCCTTCTTCTCTGGACTCCTCCCTCGCCCTTGAAGAGGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS-3UTR CAA 90 bp GACACCGACGTACCCCTCACCTTGCACCTTGAACCCTGCTCTGAAGCCCGTGTACAGGTTAGAATGATCTaGGGGATGCATGGGAATGTA +
Preference number: 5 (lower is better)
Translates to: DTDVPLTLHLEPCSEARVQVRMI*GMHGNV
Trigger: TACATTCCCATGCATCCCCAAGATCATTCTAACCTG...TACACGGGCTTCAGAGCAGGGTTCAAGGTGCAAGGTGAGGGGTACGTCGGTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371150.5
CDS CCA 90 bp TGCCTCAAGAGCTGGTCTGTGGTGGTCCCAGTTTCTGGCAGATGCTaGCTCAGTGCCCGGCATGCATTAAGAAATTCTTCTGAGGGTTTA +
Preference number: 5 (lower is better)
Translates to: CLKSWSVVVPVSGRC*LSARHALRNSSEGL
Trigger: TAAACCCTCAGAAGAATTTCTTAATGCATGCCGGGCACTGAGCCAGCATCTGCCAGAAACTGGGACCACCACAGACCAGCTCTTGAGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS CCA 90 bp GTTCAAGCTTTGCCTCAAGAGCTGGTCTGTGGTGGTCCCAGTTTCTaGCAGATGCTGGCTCAGTGCCCGGCATGCATTAAGAAATTCTTC +
Preference number: 5 (lower is better)
Translates to: VQALPQELVCGGPSF*QMLAQCPACIKKFF
Trigger: GAAGAATTTCTTAATGCATGCCGGGCACTGAGCCAGCATCTGCCAGAAACTGGGACCACCACAGACCAGCTCTTGAGGCAAAGCTTGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CAA 90 bp ACCAGTCTGCACGGTGATTCTTCTAGGGTCCCCTACAGAATGCTTGCCAGGGGGGATGGTGTTCAAGCTTaGCCTCTGAAACCCCAAAAA +
Preference number: 5 (lower is better)
Translates to: TSLHGDSSRVPYRMLARGDGVQA*PLKPQK
Trigger: TTTTTGGGGTTTCAGAGGCAAAGCTTGAACACCATC...CCCCCTGGCAAGCATTCTGTAGGGGACCCTAGAAGAATCACCGTGCAGACTGGT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000317477.8
CDS-3UTR CAA 90 bp TGCCAAAGTGCTTCTTCTACCCTGTCAGATTTTAAGATTTCTCTGTCAACCCCAGCTGTGCGGCCAGCCTaGTCAGTCAGGCTGCTGTCG +
Preference number: 5 (lower is better)
Translates to: CQSASSTLSDFKISLSTPAVRPA*SVRLLS
Trigger: CGACAGCAGCCTGACTGACAAGGCTGGCCGCACAGC...TGGGGTTGACAGAGAAATCTTAAAATCTGACAGGGTAGAAGAAGCACTTTGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CAA 90 bp GCTAATGTGCTCCTGCCTGCCTGCTTGCTACACAATGTTACAGAGGGTAGAGTCCAGAGAAGAAGGCTTTaGTTCCCCACGGCCAGTTCT +
Preference number: 5 (lower is better)
Translates to: ANVLLPACLLHNVTEGRVQRRRL*FPTASS
Trigger: AGAACTGGCCGTGGGGAACAAAAGCCTTCTTCTCTG...GACTCTACCCTCTGTAACATTGTGTAGCAAGCAGGCAGGCAGGAGCACATTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CAA 90 bp TTCAAGGGCGAGGGAGGAGTCCAGAGAAGAAGGCTTTTGTTCCCCACGGCCAGTAAGGCTGAAGATGTTTaGGATGTTTGGATGACACCG +
Preference number: 5 (lower is better)
Translates to: FKGEGGVQRRRLLFPTASKAEDV*DVWMTP
Trigger: CGGTGTCATCCAAACATCCAAAACATCTTCAGCCTT...ACTGGCCGTGGGGAACAAAAGCCTTCTTCTCTGGACTCCTCCCTCGCCCTTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CAA 90 bp GGTGCTTGTTCAGTTTCACCAGTCTGCACGGTGATTCTTCTAGGGTCCCCTACACTCCTGCCTGCCTGCTaGCTACACAATGTTACAGAG +
Preference number: 5 (lower is better)
Translates to: GACSVSPVCTVILLGSPTLLPAC*LHNVTE
Trigger: CTCTGTAACATTGTGTAGCAAGCAGGCAGGCAGGAG...TGTAGGGGACCCTAGAAGAATCACCGTGCAGACTGGTGAAACTGAACAAGCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CAA 90 bp GGTGCTTGTTCAGTTTCACCAGTCTGCACGGTGATTCTTCTAGGGTCCCCTACATTATATCTCTCGGCCTaGGAGTGGGGGACTTCTTCC +
Preference number: 5 (lower is better)
Translates to: GACSVSPVCTVILLGSPTLYLSA*EWGTSS
Trigger: GGAAGAAGTCCCCCACTCCAAGGCCGAGAGATATAA...TGTAGGGGACCCTAGAAGAATCACCGTGCAGACTGGTGAAACTGAACAAGCACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CAA 90 bp TGTGCTGGCCCCAGGGAATATGGAAGCTTCGGAAGGTATTGCTCTGCCCTGCCTATGCTGCCTAGAAGGTaGACTTCAATGCCCTTATCA +
Preference number: 5 (lower is better)
Translates to: CAGPREYGSFGRYCSALPMLPRR*TSMPLS
Trigger: TGATAAGGGCATTGAAGTCAACCTTCTAGGCAGCAT...AGGCAGGGCAGAGCAATACCTTCCGAAGCTTCCATATTCCCTGGGGCCAGCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS-3UTR CAA 90 bp GCCAAAGTGCTTCTTCTACCCTGTCAGATTTTAAGATTTCTCTGTCAACCCCATCATCCGTTGGCGAGCTaGGTGGCCTTCCCGGGTGCT +
Preference number: 5 (lower is better)
Translates to: AKVLLLPCQILRFLCQPHHPLAS*VAFPGA
Trigger: AGCACCCGGGAAGGCCACCAAGCTCGCCAACGGATG...ATGGGGTTGACAGAGAAATCTTAAAATCTGACAGGGTAGAAGAAGCACTTTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS TCA 90 bp CATGCTGCCCTGCAAAGCAAAACGTGGTTCCACTTTACCCGACAGTaGAGAGGGTTTGATCTGTTACAACAGGAAGTGCTGCTCAGCCGA +
Preference number: 5 (lower is better)
Translates to: HAALQSKTWFHFTRQ*RGFDLLQQEVLLSR
Trigger: TCGGCTGAGCAGCACTTCCTGTTGTAACAGATCAAACCCTCTTCACTGTCGGGTAAAGTGGAACCACGTTTTGCTTTGCAGGGCAGCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371150.5
CDS-3UTR CAA 90 bp CAACCCCATCGAAACAAAGCTCCCAAATGGTGCTTGTTCAGTTTCACCAGTCTGTCGTGGTCCTGCAGATaGACATCTGCCTGGCAGCTA +
Preference number: 5 (lower is better)
Translates to: QPHRNKAPKWCLFSFTSLSWSCR*TSAWQL
Trigger: TAGCTGCCAGGCAGATGTCAATCTGCAGGACCACGA...CAGACTGGTGAAACTGAACAAGCACCATTTGGGAGCTTTGTTTCGATGGGGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CAA 90 bp GCCCGTGTAGTTTTCAGGCTTGGCCTAAGGCAAAAACTACAAAGCATCCTAATGGACGTACCCCTCACCTaGCACCTTGAACCCTGCTCT +
Preference number: 5 (lower is better)
Translates to: ARVVFRLGLRQKLQSILMDVPLT*HLEPCS
Trigger: AGAGCAGGGTTCAAGGTGCAAGGTGAGGGGTACGTC...CATTAGGATGCTTTGTAGTTTTTGCCTTAGGCCAAGCCTGAAAACTACACGGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CAA 90 bp GCTCCCAAATGGTGCTTGTTCAGTTTCACCAGTCTGCACGGTGATTCTTCTAGGGGTCCCTTGCTCCTATaGCAGCCAGAAGTCCCAAAA +
Preference number: 5 (lower is better)
Translates to: APKWCLFSFTSLHGDSSRGPLLL*QPEVPK
Trigger: TTTTGGGACTTCTGGCTGCAATAGGAGCAAGGGACC...CCTAGAAGAATCACCGTGCAGACTGGTGAAACTGAACAAGCACCATTTGGGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317477.8
ENST00000371153.9
CDS-3UTR CAA 90 bp TCTGAGTTGCATCAACACATGTCATTGTGTTCTGGGACTCTGAGCCTCTCTTATCCCTGCCTGGGTCCCTaGCTCCTATTGCAGCCAGAA +
Preference number: 5 (lower is better)
Translates to: SELHQHMSLCSGTLSLSYPCLGP*LLLQPE
Trigger: TTCTGGCTGCAATAGGAGCAAGGGACCCAGGCAGGG...ATAAGAGAGGCTCAGAGTCCCAGAACACAATGACATGTGTTGATGCAACTCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS-3UTR CAA 90 bp GAACAGATATTTGCTTCTAGGGGATATGAGGGGAAAGCACCGGGAATTACCATGAAGCTTCGGAAGGTATaGCTCTGCCCTGCCTGGGTC +
Preference number: 5 (lower is better)
Translates to: EQIFASRGYEGKAPGITMKLRKV*LCPAWV
Trigger: GACCCAGGCAGGGCAGAGCAATACCTTCCGAAGCTT...CATGGTAATTCCCGGTGCTTTCCCCTCATATCCCCTAGAAGCAAATATCTGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317477.8
ENST00000371153.9
CDS-3UTR CAA 90 bp CCCCTCACCTTGCACCTTGAACCCTGCTCTGAAGCCCGTGTAGTTTTCAGGCTTCAGCTCTCGAATTCTTaGCTCCCTAGCTTTGATTTC +
Preference number: 5 (lower is better)
Translates to: PLTLHLEPCSEARVVFRLQLSNS*LPSFDF
Trigger: GAAATCAAAGCTAGGGAGCAAAGAATTCGAGAGCTG...AAGCCTGAAAACTACACGGGCTTCAGAGCAGGGTTCAAGGTGCAAGGTGAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS-3UTR CAA 90 bp AAGCTCCCAAATGGTGCTTGTTCAGTTTCACCAGTCTGCACGGTGATTCTTCTATCCATCAGCTGCTTCTaGTGCAGCACCTCCCAGGAG +
Preference number: 5 (lower is better)
Translates to: KLPNGACSVSPVCTVILLSISCF*CSTSQE
Trigger: CTCCTGGGAGGTGCTGCACAAGAAGCAGCTGATGGA...TAGAAGAATCACCGTGCAGACTGGTGAAACTGAACAAGCACCATTTGGGAGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS-3UTR CAA 90 bp TGCCCTCTTCAAGGGCGAGGGAGGAGTCCAGAGAAGAAGGCTTTTGTTCCCCACGCCACAAATTGGATTTaGAAACTTCCATCAGCTGCT +
Preference number: 5 (lower is better)
Translates to: CPLQGRGRSPEKKAFVPHATNWI*KLPSAA
Trigger: AGCAGCTGATGGAAGTTTCAAAATCCAATTTGTGGC...GTGGGGAACAAAAGCCTTCTTCTCTGGACTCCTCCCTCGCCCTTGAAGAGGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS TCA 90 bp AGACAACAGCCATGTCTTCATTGGTCTCTGCGGAAGCCAAGGGAGTaGTCATTACGGCAGTGTAGCCAGCTTTGTTCTGATGGTCCACAT +
Preference number: 5 (lower is better)
Translates to: RQQPCLHWSLRKPRE*SLRQCSQLCSDGPH
Trigger: ATGTGGACCATCAGAACAAAGCTGGCTACACTGCCGTAATGATCACTCCCTTGGCTTCCGCAGAGACCAATGAAGACATGGCTGTTGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS TCA 90 bp GCAAAGCAAAACGTGGTTCCACTTTACCCGACAGTGAAGAGGGTTTaGTCTGTTACAACAGGAAGTGCTGCTCAGCCGAAGGGCCCATTT +
Preference number: 5 (lower is better)
Translates to: AKQNVVPLYPTVKRV*SVTTGSAAQPKGPF
Trigger: AAATGGGCCCTTCGGCTGAGCAGCACTTCCTGTTGTAACAGATCAAACCCTCTTCACTGTCGGGTAAAGTGGAACCACGTTTTGCTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371150.5
CDS GCA 90 bp AGTCAAATTGTGATTTGTGGCAGGAAGCAGACTCGCATGCTGCCCTaGAAAGCAAAACGTGGTTCCACTTTACCCGACAGTGAAGAGGGT +
Preference number: 5 (lower is better)
Translates to: SQIVICGRKQTRMLP*KAKRGSTLPDSEEG
Trigger: ACCCTCTTCACTGTCGGGTAAAGTGGAACCACGTTTTGCTTTGCAGGGCAGCATGCGAGTCTGCTTCCTGCCACAAATCACAATTTGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371150.5
CDS-3UTR CAA 90 bp GGTGCTTGTTCAGTTTCACCAGTCTGCACGGTGATTCTTCTAGGGTCCCCTACATTTCCCTGGAGCAAATaGGAGCCACTAGATGACTCA +
Preference number: 5 (lower is better)
Translates to: GACSVSPVCTVILLGSPTFPWSK*EPLDDS
Trigger: TGAGTCATCTAGTGGCTCCAATTTGCTCCAGGGAAA...TGTAGGGGACCCTAGAAGAATCACCGTGCAGACTGGTGAAACTGAACAAGCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS GCA 90 bp TTACCCGACAGTGAAGAGGGTTTGATCTGTTACAACAGGAAGTGCTaGTCAGCCGAAGGGCCCATTTCCATATGTGAGCAGCACTTAATC +
Preference number: 5 (lower is better)
Translates to: LPDSEEGLICYNRKC*SAEGPISICEQHLI
Trigger: GATTAAGTGCTGCTCACATATGGAAATGGGCCCTTCGGCTGAGCAGCACTTCCTGTTGTAACAGATCAAACCCTCTTCACTGTCGGGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371150.5
CDS GCA 90 bp ACTTTACCCGACAGTGAAGAGGGTTTGATCTGTTACAACAGGAAGTaGTGCTCAGCCGAAGGGCCCATTTCCATATGTGAGCAGCACTTA +
Preference number: 5 (lower is better)
Translates to: TLPDSEEGLICYNRK*CSAEGPISICEQHL
Trigger: TAAGTGCTGCTCACATATGGAAATGGGCCCTTCGGCTGAGCAGCACTTCCTGTTGTAACAGATCAAACCCTCTTCACTGTCGGGTAAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371150.5
CDS-3UTR CAA 90 bp TGCCAAAGTGCTTCTTCTACCCTGTCAGATTTTAAGATTTCTCTGTCAACCCCAGCAGCTAAGCAGCGCTaGAACCATGTCCTCCCTGTC +
Preference number: 5 (lower is better)
Translates to: CQSASSTLSDFKISLSTPAAKQR*NHVLPV
Trigger: GACAGGGAGGACATGGTTCAAGCGCTGCTTAGCTGC...TGGGGTTGACAGAGAAATCTTAAAATCTGACAGGGTAGAAGAAGCACTTTGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CAA 90 bp GAAACAAAGCTCCCAAATGGTGCTTGTTCAGTTTCACCAGTCTGCACGGTGATTCAGAGAAGAAGGCTTTaGTTCCCCACGGCCAGTTCT +
Preference number: 5 (lower is better)
Translates to: ETKLPNGACSVSPVCTVIQRRRL*FPTASS
Trigger: AGAACTGGCCGTGGGGAACAAAAGCCTTCTTCTCTG...AATCACCGTGCAGACTGGTGAAACTGAACAAGCACCATTTGGGAGCTTTGTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CAA 90 bp GCCAAAGTGCTTCTTCTACCCTGTCAGATTTTAAGATTTCTCTGTCAACCCCATGACGTACCCCTCACCTaGCACCTTGAACCCTGCTCT +
Preference number: 5 (lower is better)
Translates to: AKVLLLPCQILRFLCQPHDVPLT*HLEPCS
Trigger: AGAGCAGGGTTCAAGGTGCAAGGTGAGGGGTACGTC...ATGGGGTTGACAGAGAAATCTTAAAATCTGACAGGGTAGAAGAAGCACTTTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CAA 90 bp TTTGGATGTTTGGATGACACCGACGTACCCCTCACCTTGCACCTTGAACCCTGCACTGTACATATGGCATaGATGCCAAAGTGCTTCTTC +
Preference number: 5 (lower is better)
Translates to: FGCLDDTDVPLTLHLEPCTVHMA*MPKCFF
Trigger: GAAGAAGCACTTTGGCATCAATGCCATATGTACAGT...GCAGGGTTCAAGGTGCAAGGTGAGGGGTACGTCGGTGTCATCCAAACATCCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CAA 90 bp CAACCCCATCGAAACAAAGCTCCCAAATGGTGCTTGTTCAGTTTCACCAGTCTGAAACTGTCCTTCCAGTaGGGCTACAGTGAACTCCAG +
Preference number: 5 (lower is better)
Translates to: QPHRNKAPKWCLFSFTSLKLSFQ*GYSELQ
Trigger: CTGGAGTTCACTGTAGCCCAACTGGAAGGACAGTTT...CAGACTGGTGAAACTGAACAAGCACCATTTGGGAGCTTTGTTTCGATGGGGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS-3UTR CAA 90 bp AAGCTCCCAAATGGTGCTTGTTCAGTTTCACCAGTCTGCACGGTGATTCTTCTATGGGCTCTGATTCCCTaGTTTATGACCATCTGGCCC +
Preference number: 5 (lower is better)
Translates to: KLPNGACSVSPVCTVILLWALIP*FMTIWP
Trigger: GGGCCAGATGGTCATAAACAAGGGAATCAGAGCCCA...TAGAAGAATCACCGTGCAGACTGGTGAAACTGAACAAGCACCATTTGGGAGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS-3UTR CAA 90 bp AAGGATAGGCCAGAGGCTTGCTACTCAAAGTGTGGTTGTGGCTCGATAGCATCACTCTCCACCTCTGAGTaGCATCAACACATGTCATTG +
Preference number: 5 (lower is better)
Translates to: KDRPEACYSKCGCGSIASLSTSE*HQHMSL
Trigger: CAATGACATGTGTTGATGCAACTCAGAGGTGGAGAG...TGATGCTATCGAGCCACAACCACACTTTGAGTAGCAAGCCTCTGGCCTATCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS-3UTR CAA 90 bp AGTGCTTCTTCTACCCTGTCAGATTTTAAGATTTCTCTGTCAACCCCATCGAAAGCTGCAGCGCAAGGCTaGGCAAATGGAGTGTGGGCT +
Preference number: 5 (lower is better)
Translates to: SASSTLSDFKISLSTPSKAAAQG*ANGVWA
Trigger: AGCCCACACTCCATTTGCCAAGCCTTGCGCTGCAGC...TTTCGATGGGGTTGACAGAGAAATCTTAAAATCTGACAGGGTAGAAGAAGCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371150.5
CDS-3UTR CAA 90 bp TTCAGTTTCACCAGTCTGCACGGTGATTCTTCTAGGGTCCCCTACAGAATGCTTCCCCAGACACTGCCTTaGCACAATGCAAATGAGAAC +
Preference number: 5 (lower is better)
Translates to: FSFTSLHGDSSRVPYRMLPQTLP*HNANEN
Trigger: GTTCTCATTTGCATTGTGCAAAGGCAGTGTCTGGGG...AAGCATTCTGTAGGGGACCCTAGAAGAATCACCGTGCAGACTGGTGAAACTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371150.5
CDS-3UTR CAA 90 bp GGTGCTTGTTCAGTTTCACCAGTCTGCACGGTGATTCTTCTAGGGTCCCCTACAGACAGTGAAGAGGGTTaGATCTGTTACAACAGGAAG +
Preference number: 5 (lower is better)
Translates to: GACSVSPVCTVILLGSPTDSEEG*ICYNRK
Trigger: CTTCCTGTTGTAACAGATCAAACCCTCTTCACTGTC...TGTAGGGGACCCTAGAAGAATCACCGTGCAGACTGGTGAAACTGAACAAGCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371150.5
CDS-3UTR CAA 90 bp GAAACAAAGCTCCCAAATGGTGCTTGTTCAGTTTCACCAGTCTGCACGGTGATTTGTTTTGGGGACCTCTaGGAGGAGCCTTGCTTTCTG +
Preference number: 5 (lower is better)
Translates to: ETKLPNGACSVSPVCTVICFGDL*EEPCFL
Trigger: CAGAAAGCAAGGCTCCTCCAAGAGGTCCCCAAAACA...AATCACCGTGCAGACTGGTGAAACTGAACAAGCACCATTTGGGAGCTTTGTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371150.5
CDS-3UTR CAA 90 bp TTCAGTTTCACCAGTCTGCACGGTGATTCTTCTAGGGTCCCCTACAGAATGCTTAGATGTTTTGGATGTTaGGATGACACCGACGTACCC +
Preference number: 5 (lower is better)
Translates to: FSFTSLHGDSSRVPYRMLRCFGC*DDTDVP
Trigger: GGGTACGTCGGTGTCATCCAAACATCCAAAACATCT...AAGCATTCTGTAGGGGACCCTAGAAGAATCACCGTGCAGACTGGTGAAACTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CAA 90 bp AAGTATTGCTTTTCTAATGTGCTAATGTGCTCCTGCCTGCCTGCTTGCTACACATCCCCTACAGAATGCTaGCCAGGGGGTTGGCTTAAA +
Preference number: 5 (lower is better)
Translates to: KYCFSNVLMCSCLPACYTSPTEC*PGGWLK
Trigger: TTTAAGCCAACCCCCTGGCAAGCATTCTGTAGGGGA...TGTGTAGCAAGCAGGCAGGCAGGAGCACATTAGCACATTAGAAAAGCAATACTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CAA 90 bp GAAACAAAGCTCCCAAATGGTGCTTGTTCAGTTTCACCAGTCTGCACGGTGATTGCTCCCAAATGGTGCTaGTTCAGTTTCACCAGTCTG +
Preference number: 5 (lower is better)
Translates to: ETKLPNGACSVSPVCTVIAPKWC*FSFTSL
Trigger: CAGACTGGTGAAACTGAACAAGCACCATTTGGGAGC...AATCACCGTGCAGACTGGTGAAACTGAACAAGCACCATTTGGGAGCTTTGTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CAA 90 bp CAGGAATGTATGTGCATATTTGACATAGTTTCTTCTCTAGAAGGGTGGCTCTCTCGCTGGTCTCCTCACTaGAGGTGGTCTCATACCCAC +
Preference number: 5 (lower is better)
Translates to: QECMCIFDIVSSLEGWLSRWSPH*RWSHTH
Trigger: GTGGGTATGAGACCACCTCAAGTGAGGAGACCAGCG...AGAGAGCCACCCTTCTAGAGAAGAAACTATGTCAAATATGCACATACATTCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CAA 90 bp AAGTATTGCTTTTCTAATGTGCTAATGTGCTCCTGCCTGCCTGCTTGCTACACATTATATCTCTCGGCCTaGGAGTGGGGGACTTCTTCC +
Preference number: 5 (lower is better)
Translates to: KYCFSNVLMCSCLPACYTLYLSA*EWGTSS
Trigger: GGAAGAAGTCCCCCACTCCAAGGCCGAGAGATATAA...TGTGTAGCAAGCAGGCAGGCAGGAGCACATTAGCACATTAGAAAAGCAATACTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CAA 90 bp AAGCTCCCAAATGGTGCTTGTTCAGTTTCACCAGTCTGCACGGTGATTCTTCTAGATGGTGTTCAAGCTTaGCCTCAAGAGCTGGTCTGT +
Preference number: 5 (lower is better)
Translates to: KLPNGACSVSPVCTVILLDGVQA*PQELVC
Trigger: ACAGACCAGCTCTTGAGGCAAAGCTTGAACACCATC...TAGAAGAATCACCGTGCAGACTGGTGAAACTGAACAAGCACCATTTGGGAGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CAA 90 bp GCCCGTGTAGTTTTCAGGCTTGGCCTAAGGCAAAAACTACAAAGCATCCTAATGCTTTGCTCCCTAGCTTaGATTTCCTCTTCCTGCTGC +
Preference number: 5 (lower is better)
Translates to: ARVVFRLGLRQKLQSILMLCSLA*ISSSCC
Trigger: GCAGCAGGAAGAGGAAATCAAAGCTAGGGAGCAAAG...CATTAGGATGCTTTGTAGTTTTTGCCTTAGGCCAAGCCTGAAAACTACACGGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS CCA 90 bp AAGTTTCGGGGCAGAGTGCTAAATTTGGCCTGCTTGGCCCTTCTGTaGATAGGAATTCTTTTGATAGTGTTTCCCTTCTCGATGTCATCC +
Preference number: 5 (lower is better)
Translates to: KFRGRVLNLACLALL*IGILLIVFPFSMSS
Trigger: GGATGACATCGAGAAGGGAAACACTATCAAAAGAATTCCTATCCACAGAAGGGCCAAGCAGGCCAAATTTAGCACTCTGCCCCGAAACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS CCA 90 bp AGAACTAGCACTGAAACAATGAGAAAGCAGTCAAATTGTGATTTGTaGCAGGAAGCAGACTCGCATGCTGCCCTGCAAAGCAAAACGTGG +
Preference number: 5 (lower is better)
Translates to: RTSTETMRKQSNCDL*QEADSHAALQSKTW
Trigger: CCACGTTTTGCTTTGCAGGGCAGCATGCGAGTCTGCTTCCTGCCACAAATCACAATTTGACTGCTTTCTCATTGTTTCAGTGCTAGTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371150.5
CDS-3UTR CAA 90 bp GAACAGATATTTGCTTCTAGGGGATATGAGGGGAAAGCACCGGGAATTACCATGAGATGTTTTGGATGTTaGGATGACACCGACGTACCC +
Preference number: 5 (lower is better)
Translates to: EQIFASRGYEGKAPGITMRCFGC*DDTDVP
Trigger: GGGTACGTCGGTGTCATCCAAACATCCAAAACATCT...CATGGTAATTCCCGGTGCTTTCCCCTCATATCCCCTAGAAGCAAATATCTGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317477.8
ENST00000371153.9
CDS-3UTR CAA 90 bp CAACCCCATCGAAACAAAGCTCCCAAATGGTGCTTGTTCAGTTTCACCAGTCTGAAGGCTGAAGATGTTTaGGATGTTTGGATGACACCG +
Preference number: 5 (lower is better)
Translates to: QPHRNKAPKWCLFSFTSLKAEDV*DVWMTP
Trigger: CGGTGTCATCCAAACATCCAAAACATCTTCAGCCTT...CAGACTGGTGAAACTGAACAAGCACCATTTGGGAGCTTTGTTTCGATGGGGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CAA 90 bp AAGCTCCCAAATGGTGCTTGTTCAGTTTCACCAGTCTGCACGGTGATTCTTCTATTTCCCTGGAGCAAATaGGAGCCACTAGATGACTCA +
Preference number: 5 (lower is better)
Translates to: KLPNGACSVSPVCTVILLFPWSK*EPLDDS
Trigger: TGAGTCATCTAGTGGCTCCAATTTGCTCCAGGGAAA...TAGAAGAATCACCGTGCAGACTGGTGAAACTGAACAAGCACCATTTGGGAGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CAA 90 bp GCCCGTGTAGTTTTCAGGCTTGGCCTAAGGCAAAAACTACAAAGCATCCTAATGCAGTCAAATTGTGATTaGTGGCAGGAAGCAGACTCG +
Preference number: 5 (lower is better)
Translates to: ARVVFRLGLRQKLQSILMQSNCD*WQEADS
Trigger: CGAGTCTGCTTCCTGCCACAAATCACAATTTGACTG...CATTAGGATGCTTTGTAGTTTTTGCCTTAGGCCAAGCCTGAAAACTACACGGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371150.5
CDS-3UTR CAA 90 bp CAAAGTGCTTCTTCTACCCTGTCAGATTTTAAGATTTCTCTGTCAACCCCATCGCCTCTTGGAGGAGCCTaGCTTTCTGCTCAATGTTGG +
Preference number: 5 (lower is better)
Translates to: QSASSTLSDFKISLSTPSPLGGA*LSAQCW
Trigger: CCAACATTGAGCAGAAAGCAAGGCTCCTCCAAGAGG...CGATGGGGTTGACAGAGAAATCTTAAAATCTGACAGGGTAGAAGAAGCACTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371150.5
CDS GCA 90 bp CCAGATCATGTAAATCAATGTTTTGGGGACCTCTTGGAGGAGCCTTaGTTTCTGCTCAATGTTGGGAGAACTGTCTCTGTTAACAATGCC +
Preference number: 5 (lower is better)
Translates to: PDHVNQCFGDLLEEP*FLLNVGRTVSVNNA
Trigger: GGCATTGTTAACAGAGACAGTTCTCCCAACATTGAGCAGAAAGCAAGGCTCCTCCAAGAGGTCCCCAAAACATTGATTTACATGATCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371150.5
CDS-3UTR CAA 90 bp AGTGCTTCTTCTACCCTGTCAGATTTTAAGATTTCTCTGTCAACCCCATCGAAAGACGCGGAACCACTCTaGACTGATGGTGTTCAAGCT +
Preference number: 5 (lower is better)
Translates to: SASSTLSDFKISLSTPSKDAEPL*TDGVQA
Trigger: AGCTTGAACACCATCAGTCAAGAGTGGTTCCGCGTC...TTTCGATGGGGTTGACAGAGAAATCTTAAAATCTGACAGGGTAGAAGAAGCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CAA 90 bp CAGGAATGTATGTGCATATTTGACATAGTTTCTTCTCTAGAAGGGTGGCTCTCTCAGAGAAGAAGGCTTTaGTTCCCCACGGCCAGTTCT +
Preference number: 5 (lower is better)
Translates to: QECMCIFDIVSSLEGWLSQRRRL*FPTASS
Trigger: AGAACTGGCCGTGGGGAACAAAAGCCTTCTTCTCTG...AGAGAGCCACCCTTCTAGAGAAGAAACTATGTCAAATATGCACATACATTCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CAA 90 bp CAGGAATGTATGTGCATATTTGACATAGTTTCTTCTCTAGAAGGGTGGCTCTCTCTCCTGCCTGCCTGCTaGCTACACAATGTTACAGAG +
Preference number: 5 (lower is better)
Translates to: QECMCIFDIVSSLEGWLSLLPAC*LHNVTE
Trigger: CTCTGTAACATTGTGTAGCAAGCAGGCAGGCAGGAG...AGAGAGCCACCCTTCTAGAGAAGAAACTATGTCAAATATGCACATACATTCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CAA 90 bp CAGGAATGTATGTGCATATTTGACATAGTTTCTTCTCTAGAAGGGTGGCTCTCTTCCCCTACAGAATGCTaGCCAGGGGGTTGGCTTAAA +
Preference number: 5 (lower is better)
Translates to: QECMCIFDIVSSLEGWLSSPTEC*PGGWLK
Trigger: TTTAAGCCAACCCCCTGGCAAGCATTCTGTAGGGGA...AGAGAGCCACCCTTCTAGAGAAGAAACTATGTCAAATATGCACATACATTCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CAA 90 bp TGCCAAAGTGCTTCTTCTACCCTGTCAGATTTTAAGATTTCTCTGTCAACCCCAGCTCCCAAATGGTGCTaGTTCAGTTTCACCAGTCTG +
Preference number: 5 (lower is better)
Translates to: CQSASSTLSDFKISLSTPAPKWC*FSFTSL
Trigger: CAGACTGGTGAAACTGAACAAGCACCATTTGGGAGC...TGGGGTTGACAGAGAAATCTTAAAATCTGACAGGGTAGAAGAAGCACTTTGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CAA 90 bp TTCAGTTTCACCAGTCTGCACGGTGATTCTTCTAGGGTCCCCTACAGAATGCTTACTGTACATATGGCATaGATGCCAAAGTGCTTCTTC +
Preference number: 5 (lower is better)
Translates to: FSFTSLHGDSSRVPYRMLTVHMA*MPKCFF
Trigger: GAAGAAGCACTTTGGCATCAATGCCATATGTACAGT...AAGCATTCTGTAGGGGACCCTAGAAGAATCACCGTGCAGACTGGTGAAACTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CAA 90 bp GAACAGATATTTGCTTCTAGGGGATATGAGGGGAAAGCACCGGGAATTACCATGCCTCAGAACAGATATTaGCTTCTAGGGGATATGAGG +
Preference number: 5 (lower is better)
Translates to: EQIFASRGYEGKAPGITMPQNRY*LLGDMR
Trigger: CCTCATATCCCCTAGAAGCAAATATCTGTTCTGAGG...CATGGTAATTCCCGGTGCTTTCCCCTCATATCCCCTAGAAGCAAATATCTGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317477.8
ENST00000371153.9
CDS-3UTR CAA 90 bp CAAAGTGCTTCTTCTACCCTGTCAGATTTTAAGATTTCTCTGTCAACCCCATCGGATGGTGTTCAAGCTTaGCCTCAAGAGCTGGTCTGT +
Preference number: 5 (lower is better)
Translates to: QSASSTLSDFKISLSTPSDGVQA*PQELVC
Trigger: ACAGACCAGCTCTTGAGGCAAAGCTTGAACACCATC...CGATGGGGTTGACAGAGAAATCTTAAAATCTGACAGGGTAGAAGAAGCACTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CAA 90 bp CAACCCCATCGAAACAAAGCTCCCAAATGGTGCTTGTTCAGTTTCACCAGTCTGTTGTGTTCATCTTCCTaGTCCTCTAGAACTACAAGC +
Preference number: 5 (lower is better)
Translates to: QPHRNKAPKWCLFSFTSLLCSSS*SSRTTS
Trigger: GCTTGTAGTTCTAGAGGACAAGGAAGATGAACACAA...CAGACTGGTGAAACTGAACAAGCACCATTTGGGAGCTTTGTTTCGATGGGGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS-3UTR CAA 90 bp GCCCGTGTAGTTTTCAGGCTTGGCCTAAGGCAAAAACTACAAAGCATCCTAATGTTAGAGATGATGAAATaGCGGCCCAAGGAGGTTTCA +
Preference number: 5 (lower is better)
Translates to: ARVVFRLGLRQKLQSILMLEMMK*RPKEVS
Trigger: TGAAACCTCCTTGGGCCGCAATTTCATCATCTCTAA...CATTAGGATGCTTTGTAGTTTTTGCCTTAGGCCAAGCCTGAAAACTACACGGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS-3UTR CAA 90 bp TCTGAGTTGCATCAACACATGTCATTGTGTTCTGGGACTCTGAGCCTCTCTTATGCGCTCGGCCACAAATaGGATTTTGAAACTTCCATC +
Preference number: 5 (lower is better)
Translates to: SELHQHMSLCSGTLSLSYALGHK*DFETSI
Trigger: GATGGAAGTTTCAAAATCCAATTTGTGGCCGAGCGC...ATAAGAGAGGCTCAGAGTCCCAGAACACAATGACATGTGTTGATGCAACTCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS-3UTR CAA 90 bp GCCAAAGTGCTTCTTCTACCCTGTCAGATTTTAAGATTTCTCTGTCAACCCCATGCCTCCCTGAGTAGCTaGAATGTTCACATTTCCTTC +
Preference number: 5 (lower is better)
Translates to: AKVLLLPCQILRFLCQPHASLSS*NVHISF
Trigger: GAAGGAAATGTGAACATTCAAGCTACTCAGGGAGGC...ATGGGGTTGACAGAGAAATCTTAAAATCTGACAGGGTAGAAGAAGCACTTTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CAA 90 bp AGTGCTTCTTCTACCCTGTCAGATTTTAAGATTTCTCTGTCAACCCCATCGAAAGATGGTGTTCAAGCTTaGCCTCAAGAGCTGGTCTGT +
Preference number: 5 (lower is better)
Translates to: SASSTLSDFKISLSTPSKDGVQA*PQELVC
Trigger: ACAGACCAGCTCTTGAGGCAAAGCTTGAACACCATC...TTTCGATGGGGTTGACAGAGAAATCTTAAAATCTGACAGGGTAGAAGAAGCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CAA 90 bp AACAAAGCTCCCAAATGGTGCTTGTTCAGTTTCACCAGTCTGCACGGTGATTCTCTCCCAGGAGGTAGGTaGTATGACAATTTCTGTTTT +
Preference number: 5 (lower is better)
Translates to: NKAPKWCLFSFTSLHGDSLPGGR*YDNFCF
Trigger: AAAACAGAAATTGTCATACAACCTACCTCCTGGGAG...AGAATCACCGTGCAGACTGGTGAAACTGAACAAGCACCATTTGGGAGCTTTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS-3UTR CAA 90 bp CAGGAATGTATGTGCATATTTGACATAGTTTCTTCTCTAGAAGGGTGGCTCTCTAGATGTTTTGGATGTTaGGATGACACCGACGTACCC +
Preference number: 5 (lower is better)
Translates to: QECMCIFDIVSSLEGWLSRCFGC*DDTDVP
Trigger: GGGTACGTCGGTGTCATCCAAACATCCAAAACATCT...AGAGAGCCACCCTTCTAGAGAAGAAACTATGTCAAATATGCACATACATTCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CAA 90 bp AAGTATTGCTTTTCTAATGTGCTAATGTGCTCCTGCCTGCCTGCTTGCTACACAACTGTACATATGGCATaGATGCCAAAGTGCTTCTTC +
Preference number: 5 (lower is better)
Translates to: KYCFSNVLMCSCLPACYTTVHMA*MPKCFF
Trigger: GAAGAAGCACTTTGGCATCAATGCCATATGTACAGT...TGTGTAGCAAGCAGGCAGGCAGGAGCACATTAGCACATTAGAAAAGCAATACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CAA 90 bp CAAAGTGCTTCTTCTACCCTGTCAGATTTTAAGATTTCTCTGTCAACCCCATCGCCTCAGAACAGATATTaGCTTCTAGGGGATATGAGG +
Preference number: 5 (lower is better)
Translates to: QSASSTLSDFKISLSTPSPQNRY*LLGDMR
Trigger: CCTCATATCCCCTAGAAGCAAATATCTGTTCTGAGG...CGATGGGGTTGACAGAGAAATCTTAAAATCTGACAGGGTAGAAGAAGCACTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317477.8
ENST00000371153.9
CDS-3UTR CAA 90 bp CAGGAATGTATGTGCATATTTGACATAGTTTCTTCTCTAGAAGGGTGGCTCTCTAAGGCTGAAGATGTTTaGGATGTTTGGATGACACCG +
Preference number: 5 (lower is better)
Translates to: QECMCIFDIVSSLEGWLSKAEDV*DVWMTP
Trigger: CGGTGTCATCCAAACATCCAAAACATCTTCAGCCTT...AGAGAGCCACCCTTCTAGAGAAGAAACTATGTCAAATATGCACATACATTCCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CAA 90 bp TCTGAGTTGCATCAACACATGTCATTGTGTTCTGGGACTCTGAGCCTCTCTTATAAGATCCCAGGTGATTaGTATGCACATAAATGTTCG +
Preference number: 5 (lower is better)
Translates to: SELHQHMSLCSGTLSLSYKIPGD*YAHKCS
Trigger: CGAACATTTATGTGCATACAAATCACCTGGGATCTT...ATAAGAGAGGCTCAGAGTCCCAGAACACAATGACATGTGTTGATGCAACTCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS-3UTR CAA 90 bp AGTGCTTCTTCTACCCTGTCAGATTTTAAGATTTCTCTGTCAACCCCATCGAAAACTGTACATATGGCATaGATGCCAAAGTGCTTCTTC +
Preference number: 5 (lower is better)
Translates to: SASSTLSDFKISLSTPSKTVHMA*MPKCFF
Trigger: GAAGAAGCACTTTGGCATCAATGCCATATGTACAGT...TTTCGATGGGGTTGACAGAGAAATCTTAAAATCTGACAGGGTAGAAGAAGCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS-3UTR CAA 90 bp AGTGCTTCTTCTACCCTGTCAGATTTTAAGATTTCTCTGTCAACCCCATCGAAATGGATAGGAATTCTTTaGATAGTGTTTCCCTTCTCG +
Preference number: 5 (lower is better)
Translates to: SASSTLSDFKISLSTPSKWIGIL*IVFPFS
Trigger: CGAGAAGGGAAACACTATCAAAAGAATTCCTATCCA...TTTCGATGGGGTTGACAGAGAAATCTTAAAATCTGACAGGGTAGAAGAAGCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS-3UTR CAA 90 bp AAAGTGCTTCTTCTACCCTGTCAGATTTTAAGATTTCTCTGTCAACCCCATCGAAATGGCAAAAGAAGTTaGCTGTACCATTGCTGTAGA +
Preference number: 5 (lower is better)
Translates to: KVLLLPCQILRFLCQPHRNGKRS*LYHCCR
Trigger: TCTACAGCAATGGTACAGCAAACTTCTTTTGCCATT...TCGATGGGGTTGACAGAGAAATCTTAAAATCTGACAGGGTAGAAGAAGCACTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS CCA 72 bp GGAGATCTCCACTGGCGGGGAGGAGGAGGAGGCCGGTaGCTCCTTGGGTGGGTGAGCCTGGGCCGAGTAGGC +
Preference number: 6 (lower is better)
Translates to: GDLHWRGGGGGR*LLGWVSLGRVG
Trigger: GCCTACTCGGCCCAGGCTCACCCACCCAAGGAGCCACCGGCCTCCTCCTCCTCCCCGCCAGTGGAGATCTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS GCA 72 bp GGCTGCTTGATGGCGCTGGCCAGCTCCGGGTACCCATaGTCCAGGCAGTTCCACTGCTCCTGCAGGAGCTCC +
Preference number: 6 (lower is better)
Translates to: GCLMALASSGYP*SRQFHCSCRSS
Trigger: GGAGCTCCTGCAGGAGCAGTGGAACTGCCTGGAGCATGGGTACCCGGAGCTGGCCAGCGCCATCAAGCAGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS GCA 72 bp TGGACAAAGCTGTGCGGCCAGCCTTGTCAGTCAGGCTaGTGTCGCAGGCTGGGTGTGCCAGGAGCAGCCGCA +
Preference number: 6 (lower is better)
Translates to: WTKLCGQPCQSG*CRRLGVPGAAA
Trigger: TGCGGCTGCTCCTGGCACACCCAGCCTGCGACAGCAGCCTGACTGACAAGGCTGGCCGCACAGCTTTGTCCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS GCA 72 bp TCCTGGGCAGCATGGCAGGTGCCCTCAGGGATGCCCTaGCCAGCCTCGCAGGTGAGATGGGCATCTTTGACA +
Preference number: 6 (lower is better)
Translates to: SWAAWQVPSGMP*PASQVRWASLT
Trigger: TGTCAAAGATGCCCATCTCACCTGCGAGGCTGGGCAGGGCATCCCTGAGGGCACCTGCCATGCTGCCCAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS GCA 72 bp CCAGGGCCGAGACCTGCTGTTTCAGGCTGGAGATGCTaGCTGGATCCACCCTGGCAAGGCCCAGGCTTTCCT +
Preference number: 6 (lower is better)
Translates to: PGPRPAVSGWRC*LDPPWQGPGFP
Trigger: AGGAAAGCCTGGGCCTTGCCAGGGTGGATCCAGGCAGCATCTCCAGCCTGAAACAGCAGGTCTCGGCCCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS GCA 72 bp CCTCCAGGGCCGAGACCTGCTGTTTCAGGCTGGAGATaGTGCCTGGATCCACCCTGGCAAGGCCCAGGCTTT +
Preference number: 6 (lower is better)
Translates to: PPGPRPAVSGWR*CLDPPWQGPGF
Trigger: AAAGCCTGGGCCTTGCCAGGGTGGATCCAGGCAGCATCTCCAGCCTGAAACAGCAGGTCTCGGCCCTGGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS GCA 72 bp TCTTCTCTGCCTCGCTGTCAGACAAGTCCTCTGGGGTaGTGTCCTCACCGCTGGTCTCCTCACTTGAGGTGG +
Preference number: 6 (lower is better)
Translates to: SSLPRCQTSPLG*CPHRWSPHLRW
Trigger: CCACCTCAAGTGAGGAGACCAGCGGTGAGGACAGCACCCCAGAGGACTTGTCTGACAGCGAGGCAGAGAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS GCA 72 bp GTTCTTCCAGACAACTCTCCCTCCAGGGCCGAGACCTaGTGTTTCAGGCTGGAGATGCTGCCTGGATCCACC +
Preference number: 6 (lower is better)
Translates to: VLPDNSPSRAET*CFRLEMLPGST
Trigger: GGTGGATCCAGGCAGCATCTCCAGCCTGAAACAGCAGGTCTCGGCCCTGGAGGGAGAGTTGTCTGGAAGAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS GCA 72 bp GCCAGCTCCGGGTACCCATGCTCCAGGCAGTTCCACTaGTCCTGCAGGAGCTCCTGGATCTTCTTCACATAC +
Preference number: 6 (lower is better)
Translates to: ASSGYPCSRQFH*SCRSSWIFFTY
Trigger: GTATGTGAAGAAGATCCAGGAGCTCCTGCAGGAGCAGTGGAACTGCCTGGAGCATGGGTACCCGGAGCTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS GCA 72 bp CGCAGCAGGGCCATTCTTGGCCCCAGACACTGCCTTTaGACAATGCAAATGAGAACAGCCCCCTCTGGGTGG +
Preference number: 6 (lower is better)
Translates to: RSRAILGPRHCL*TMQMRTAPSGW
Trigger: CCACCCAGAGGGGGCTGTTCTCATTTGCATTGTGCAAAGGCAGTGTCTGGGGCCAAGAATGGCCCTGCTGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371150.5
CDS GCA 72 bp CGTAGGCCTCTGGACTCATGGTCTAGCACCCACTTCTaGTCAAGGGCACCTCAGTGGTCCTTCCTGGCTCAC +
Preference number: 6 (lower is better)
Translates to: RRPLDSWSSTHF*SRAPQWSFLAH
Trigger: GTGAGCCAGGAAGGACCACTGAGGTGCCCTTGAGCAGAAGTGGGTGCTAGACCATGAGTCCAGAGGCCTACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371150.5
CDS CCA 72 bp CGGCATCCTCTGGCTCAGCAGCTTCCAACTGTCTGGTaGCCTCTGCCAACAGAGCCTTCCTGTGGTAGCTCA +
Preference number: 6 (lower is better)
Translates to: RHPLAQQLPTVW*PLPTEPSCGSS
Trigger: TGAGCTACCACAGGAAGGCTCTGTTGGCAGAGGCCACCAGACAGTTGGAAGCTGCTGAGCCAGAGGATGCCG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS CCA 72 bp CACATACTGCCCAATAGTGGCATCCGTTGGCGAGCTTaGTGGCCTTCCCGGGTGCTCCTTCCCTGGGAGATT +
Preference number: 6 (lower is better)
Translates to: HILPNSGIRWRA*WPSRVLLPWEI
Trigger: AATCTCCCAGGGAAGGAGCACCCGGGAAGGCCACCAAGCTCGCCAACGGATGCCACTATTGGGCAGTATGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS CAA 72 bp CCCCCTCTGGGTGGATGTGGTGCTGCAGCGCAAGGCTaGGCAAATGGAGTGTGGGCTGGCTTTCAACTCTCA +
Preference number: 6 (lower is better)
Translates to: PPLGGCGAAAQG*ANGVWAGFQLS
Trigger: TGAGAGTTGAAAGCCAGCCCACACTCCATTTGCCAAGCCTTGCGCTGCAGCACCACATCCACCCAGAGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371150.5
CDS CAA 90 bp CTGGAGTCCACGCAGCAGGGCCATTCTTGGCCCCAGACACTGCCTTaGCACAATGCAAATGAGAACAGCCCCCTCTGGGTGGATGTGGTG +
Preference number: 6 (lower is better)
Translates to: LESTQQGHSWPQTLP*HNANENSPLWVDVV
Trigger: CACCACATCCACCCAGAGGGGGCTGTTCTCATTTGCATTGTGCAAAGGCAGTGTCTGGGGCCAAGAATGGCCCTGCTGCGTGGACTCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371150.5
CDS GCA 72 bp GGCCGAGGATCCATCGTGGTCCTGCAGATTGACATCTaGCTGGCAGCTAAGCAGCGCTTGAACCATGTCCTC +
Preference number: 6 (lower is better)
Translates to: GRGSIVVLQIDI*LAAKQRLNHVL
Trigger: GAGGACATGGTTCAAGCGCTGCTTAGCTGCCAGGCAGATGTCAATCTGCAGGACCACGATGGATCCTCGGCC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS GCA 72 bp CTCTGGCTCAGCAGCTTCCAACTGTCTGGTGGCCTCTaGCAACAGAGCCTTCCTGTGGTAGCTCACCTCACT +
Preference number: 6 (lower is better)
Translates to: LWLSSFQLSGGL*QQSLPVVAHLT
Trigger: AGTGAGGTGAGCTACCACAGGAAGGCTCTGTTGGCAGAGGCCACCAGACAGTTGGAAGCTGCTGAGCCAGAG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS GCA 72 bp TCCGGGTACCCATGCTCCAGGCAGTTCCACTGCTCCTaGAGGAGCTCCTGGATCTTCTTCACATACTGCCCA +
Preference number: 6 (lower is better)
Translates to: SGYPCSRQFHCS*RSSWIFFTYCP
Trigger: TGGGCAGTATGTGAAGAAGATCCAGGAGCTCCTGCAGGAGCAGTGGAACTGCCTGGAGCATGGGTACCCGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS CCA 72 bp TGTCAGACAAGTCCTCTGGGGTGCTGTCCTCACCGCTaGTCTCCTCACTTGAGGTGGTCTCATACCCACCGT +
Preference number: 6 (lower is better)
Translates to: CQTSPLGCCPHR*SPHLRWSHTHR
Trigger: ACGGTGGGTATGAGACCACCTCAAGTGAGGAGACCAGCGGTGAGGACAGCACCCCAGAGGACTTGTCTGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS CCA 72 bp GATCTTCTTCACATACTGCCCAATAGTGGCATCCGTTaGCGAGCTTGGTGGCCTTCCCGGGTGCTCCTTCCC +
Preference number: 6 (lower is better)
Translates to: DLLHILPNSGIR*RAWWPSRVLLP
Trigger: GGGAAGGAGCACCCGGGAAGGCCACCAAGCTCGCCAACGGATGCCACTATTGGGCAGTATGTGAAGAAGATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS CCA 72 bp TGCTGCAGCGCAAGGCTTGGCAAATGGAGTGTGGGCTaGCTTTCAACTCTCATTTGCCCTCCCTGGCTGGCA +
Preference number: 6 (lower is better)
Translates to: CCSARLGKWSVG*LSTLICPPWLA
Trigger: TGCCAGCCAGGGAGGGCAAATGAGAGTTGAAAGCCAGCCCACACTCCATTTGCCAAGCCTTGCGCTGCAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371150.5
CDS CCA 72 bp TGTGGTGCTGCAGCGCAAGGCTTGGCAAATGGAGTGTaGGCTGGCTTTCAACTCTCATTTGCCCTCCCTGGC +
Preference number: 6 (lower is better)
Translates to: CGAAAQGLANGV*AGFQLSFALPG
Trigger: GCCAGGGAGGGCAAATGAGAGTTGAAAGCCAGCCCACACTCCATTTGCCAAGCCTTGCGCTGCAGCACCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371150.5
CDS CCA 72 bp GAGGAACACAGGAATGCAAAAGCCCAGGAAGAGGTCTaGAGTCCACGCAGCAGGGCCATTCTTGGCCCCAGA +
Preference number: 6 (lower is better)
Translates to: EEHRNAKAQEEV*SPRSRAILGPR
Trigger: TCTGGGGCCAAGAATGGCCCTGCTGCGTGGACTCCAGACCTCTTCCTGGGCTTTTGCATTCCTGTGTTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371150.5
CDS CCA 72 bp GGGAGTGTAGGAGCAGAACGTAGGCCTCTGGACTCATaGTCTAGCACCCACTTCTGCTCAAGGGCACCTCAG +
Preference number: 6 (lower is better)
Translates to: GSVGAERRPLDS*SSTHFCSRAPQ
Trigger: CTGAGGTGCCCTTGAGCAGAAGTGGGTGCTAGACCATGAGTCCAGAGGCCTACGTTCTGCTCCTACACTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371150.5
CDS TCA 72 bp CTCTGGGGTGCTGTCCTCACCGCTGGTCTCCTCACTTaGGGTGGTCTCATACCCACCGTTAACCCCAACAAA +
Preference number: 6 (lower is better)
Translates to: LWGAVLTAGLLT*GGLIPTVNPNK
Trigger: TTTGTTGGGGTTAACGGTGGGTATGAGACCACCTCAAGTGAGGAGACCAGCGGTGAGGACAGCACCCCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS TCA 72 bp GCCTCGCAGGTGAGATGGGCATCTTTGACATGCTTGTaGTCTGGGCCGTCACACTTCTTCTCTGCCTCGCTG +
Preference number: 6 (lower is better)
Translates to: ASQVRWASLTCL*SGPSHFFSASL
Trigger: CAGCGAGGCAGAGAAGAAGTGTGACGGCCCAGATCACAAGCATGTCAAAGATGCCCATCTCACCTGCGAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS GCA 72 bp GACATGCTTGTGATCTGGGCCGTCACACTTCTTCTCTaGCTCGCTGTCAGACAAGTCCTCTGGGGTGCTGTC +
Preference number: 6 (lower is better)
Translates to: DMLVIWAVTLLL*LAVRQVLWGAV
Trigger: GACAGCACCCCAGAGGACTTGTCTGACAGCGAGGCAGAGAAGAAGTGTGACGGCCCAGATCACAAGCATGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS GCA 72 bp TGCTCCTGCAGGAGCTCCTGGATCTTCTTCACATACTaGCCAATAGTGGCATCCGTTGGCGAGCTTGGTGGC +
Preference number: 6 (lower is better)
Translates to: CSCRSSWIFFTY*PIVASVGELGG
Trigger: GCCACCAAGCTCGCCAACGGATGCCACTATTGGGCAGTATGTGAAGAAGATCCAGGAGCTCCTGCAGGAGCA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS CCA 72 bp CGTGGGCTCTCAGAAGCCCAGCAATTTCCATATGGGTaGGTGACTTCAGAGCGATGGACAAAGCTGTGCGGC +
Preference number: 6 (lower is better)
Translates to: RGLSEAQQFPYG*VTSERWTKLCG
Trigger: GCCGCACAGCTTTGTCCATCGCTCTGAAGTCACCCACCCATATGGAAATTGCTGGGCTTCTGAGAGCCCACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS CCA 72 bp GGACCAGCTCTGGAATCCGAGTTGATGCTCGTGGGCTaGAGCTGTGGAAACCTGCCAATCCTTCTGCAGGTT +
Preference number: 6 (lower is better)
Translates to: GPALESELMLVG*SCGNLPILLQV
Trigger: AACCTGCAGAAGGATTGGCAGGTTTCCACAGCTCCAGCCCACGAGCATCAACTCGGATTCCAGAGCTGGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS CCA 72 bp CTGCCTTTGCACAATGCAAATGAGAACAGCCCCCTCTaGGTGGATGTGGTGCTGCAGCGCAAGGCTTGGCAA +
Preference number: 6 (lower is better)
Translates to: LPLHNANENSPL*VDVVLQRKAWQ
Trigger: TTGCCAAGCCTTGCGCTGCAGCACCACATCCACCCAGAGGGGGCTGTTCTCATTTGCATTGTGCAAAGGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371150.5
CDS CCA 72 bp GGAAGAGGTCTGGAGTCCACGCAGCAGGGCCATTCTTaGCCCCAGACACTGCCTTTGCACAATGCAAATGAG +
Preference number: 6 (lower is better)
Translates to: GRGLESTQQGHS*PQTLPLHNANE
Trigger: CTCATTTGCATTGTGCAAAGGCAGTGTCTGGGGCCAAGAATGGCCCTGCTGCGTGGACTCCAGACCTCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371150.5
CDS CAA 72 bp TTCAAGGGCGAGGGAGGAGTCCAGAGAAGAAGGCTTTaGTTCCCCACGGCCAGTTCTTCTGCAGCCCCTACA +
Preference number: 6 (lower is better)
Translates to: FKGEGGVQRRRL*FPTASSSAAPT
Trigger: TGTAGGGGCTGCAGAAGAACTGGCCGTGGGGAACAAAAGCCTTCTTCTCTGGACTCCTCCCTCGCCCTTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS CAA 90 bp GATGACACCGTGCTCACAGTAGATACACGAGCAAGGACACAGATCTaGCAATGTGCTCAACAGGACAGGAGGCGGCTCCCAACGGGGAAG +
Preference number: 6 (lower is better)
Translates to: DDTVLTVDTRARTQI*QCAQQDRRRLPTGK
Trigger: CTTCCCCGTTGGGAGCCGCCTCCTGTCCTGTTGAGCACATTGCAAGATCTGTGTCCTTGCTCGTGTATCTACTGTGAGCACGGTGTCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371150.5
CDS GCA 72 bp TCGTGGGCTGGAGCTGTGGAAACCTGCCAATCCTTCTaGAGGTTCAAAGGTGCCATCACAGACACTGCCTTC +
Preference number: 6 (lower is better)
Translates to: SWAGAVETCQSF*RFKGAITDTAF
Trigger: GAAGGCAGTGTCTGTGATGGCACCTTTGAACCTGCAGAAGGATTGGCAGGTTTCCACAGCTCCAGCCCACGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS GCA 72 bp TTCCTCTTCCTGCTGCTGGAGAGCAGTTCTGACCTGTaGCAGTTCCTCGGTTCTTCCAGACAACTCTCCCTC +
Preference number: 6 (lower is better)
Translates to: FLFLLLESSSDL*QFLGSSRQLSL
Trigger: GAGGGAGAGTTGTCTGGAAGAACCGAGGAACTGGCACAGGTCAGAACTGCTCTCCAGCAGCAGGAAGAGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS GCA 72 bp TCATTTGCCCTCCCTGGCTGGCATCTTTGTGCCCTGTaGTATCCATACAGCTGTAGGCAGTGGGCCCATAGT +
Preference number: 6 (lower is better)
Translates to: SFALPGWHLCAL*YPYSCRQWAHS
Trigger: ACTATGGGCCCACTGCCTACAGCTGTATGGATAGCACAGGGCACAAAGATGCCAGCCAGGGAGGGCAAATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371150.5
CDS CCA 72 bp CAGCAATTTCCATATGGGTGGGTGACTTCAGAGCGATaGACAAAGCTGTGCGGCCAGCCTTGTCAGTCAGGC +
Preference number: 6 (lower is better)
Translates to: QQFPYGWVTSER*TKLCGQPCQSG
Trigger: GCCTGACTGACAAGGCTGGCCGCACAGCTTTGTCCATCGCTCTGAAGTCACCCACCCATATGGAAATTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS CCA 72 bp CCTGATGCCAATGCTTCTCATGTCCACCTCTACAGGTaGCGGGGGTGGAATCTCGCTGATGTTGAGCTCGAT +
Preference number: 6 (lower is better)
Translates to: PDANASHVHLYR*RGWNLADVELD
Trigger: ATCGAGCTCAACATCAGCGAGATTCCACCCCCGCCACCTGTAGAGGTGGACATGAGAAGCATTGGCATCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS CCA 72 bp ATGCCCTTATCACACGACTCCCTGGTCAAGAGTCCATaGACAGGGTCAGTGTTCACCATCACGTCCGTCTGG +
Preference number: 6 (lower is better)
Translates to: MPLSHDSLVKSP*TGSVFTITSVW
Trigger: CCAGACGGACGTGATGGTGAACACTGACCCTGTCCATGGACTCTTGACCAGGGAGTCGTGTGATAAGGGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS CCA 72 bp CTTTGCACAATGCAAATGAGAACAGCCCCCTCTGGGTaGATGTGGTGCTGCAGCGCAAGGCTTGGCAAATGG +
Preference number: 6 (lower is better)
Translates to: LCTMQMRTAPSG*MWCCSARLGKW
Trigger: CCATTTGCCAAGCCTTGCGCTGCAGCACCACATCCACCCAGAGGGGGCTGTTCTCATTTGCATTGTGCAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371150.5
CDS CAA 72 bp TGGCAAATGGAGTGTGGGCTGGCTTTCAACTCTCATTaGCCCTCCCTGGCTGGCATCTTTGTGCCCTGTGCT +
Preference number: 6 (lower is better)
Translates to: WQMECGLAFNSH*PSLAGIFVPCA
Trigger: AGCACAGGGCACAAAGATGCCAGCCAGGGAGGGCAAATGAGAGTTGAAAGCCAGCCCACACTCCATTTGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371150.5
CDS CAA 90 bp GTTCACCATCACGTCCGTCTGGCCCTGAGTGTCTTTGGCGTTCTCTaGGTGAAACTGTCCTTCCAGTTGGGCTACAGTGAACTCCAGCTC +
Preference number: 6 (lower is better)
Translates to: VHHHVRLALSVFGVL*VKLSFQLGYSELQL
Trigger: GAGCTGGAGTTCACTGTAGCCCAACTGGAAGGACAGTTTCACCAAGAGAACGCCAAAGACACTCAGGGCCAGACGGACGTGATGGTGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS CAA 90 bp TCTCCTCGGTGCCCCCAGCTTTCAGACTCCATGCTGCCTAGAAGGTaGACTTCAATGCCCTTATCACACGACTCCCTGGTCAAGAGTCCA +
Preference number: 6 (lower is better)
Translates to: SPRCPQLSDSMLPRR*TSMPLSHDSLVKSP
Trigger: TGGACTCTTGACCAGGGAGTCGTGTGATAAGGGCATTGAAGTCAACCTTCTAGGCAGCATGGAGTCTGAAAGCTGGGGGCACCGAGGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS CAA 90 bp CGCAAGGCTTGGCAAATGGAGTGTGGGCTGGCTTTCAACTCTCATTaGCCCTCCCTGGCTGGCATCTTTGTGCCCTGTGCTATCCATACA +
Preference number: 6 (lower is better)
Translates to: RKAWQMECGLAFNSH*PSLAGIFVPCAIHT
Trigger: TGTATGGATAGCACAGGGCACAAAGATGCCAGCCAGGGAGGGCAAATGAGAGTTGAAAGCCAGCCCACACTCCATTTGCCAAGCCTTGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371150.5
CDS TCA 72 bp GCCCCCAGCTTTCAGACTCCATGCTGCCTAGAAGGTTaGCTTCAATGCCCTTATCACACGACTCCCTGGTCA +
Preference number: 6 (lower is better)
Translates to: APSFQTPCCLEG*LQCPYHTTPWS
Trigger: TGACCAGGGAGTCGTGTGATAAGGGCATTGAAGTCAACCTTCTAGGCAGCATGGAGTCTGAAAGCTGGGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS TCA 72 bp GAAGTGCTGCTCAGCCGAAGGGCCCATTTCCATATGTaGGCAGCACTTAATCTCCTGCCCCTGTACACACAC +
Preference number: 6 (lower is better)
Translates to: EVLLSRRAHFHM*AALNLLPLYTH
Trigger: GTGTGTGTACAGGGGCAGGAGATTAAGTGCTGCTCACATATGGAAATGGGCCCTTCGGCTGAGCAGCACTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371150.5
CDS GCA 72 bp AGTAGATACACGAGCAAGGACACAGATCTTGCAATGTaGTCAACAGGACAGGAGGCGGCTCCCAACGGGGAA +
Preference number: 6 (lower is better)
Translates to: SRYTSKDTDLAM*STGQEAAPNGE
Trigger: TTCCCCGTTGGGAGCCGCCTCCTGTCCTGTTGAGCACATTGCAAGATCTGTGTCCTTGCTCGTGTATCTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371150.5
CDS CCA 72 bp GGTCGATGGGGAGATCTCATCTGTCTTCTCCATCTTTaGAGCGCTGACCCTCAGTGTCTCAGGCACTCTTCA +
Preference number: 6 (lower is better)
Translates to: GRWGDLICLLHL*SADPQCLRHSS
Trigger: TGAAGAGTGCCTGAGACACTGAGGGTCAGCGCTCCAAAGATGGAGAAGACAGATGAGATCTCCCCATCGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354381.3
CDS CCA 72 bp GCAGGTGAGATGGGCATCTTTGACATGCTTGTGATCTaGGCCGTCACACTTCTTCTCTGCCTCGCTGTCAGA +
Preference number: 6 (lower is better)
Translates to: AGEMGIFDMLVI*AVTLLLCLAVR
Trigger: TCTGACAGCGAGGCAGAGAAGAAGTGTGACGGCCCAGATCACAAGCATGTCAAAGATGCCCATCTCACCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS CCA 72 bp TCTGGAATCCGAGTTGATGCTCGTGGGCTGGAGCTGTaGAAACCTGCCAATCCTTCTGCAGGTTCAAAGGTG +
Preference number: 6 (lower is better)
Translates to: SGIRVDARGLEL*KPANPSAGSKV
Trigger: CACCTTTGAACCTGCAGAAGGATTGGCAGGTTTCCACAGCTCCAGCCCACGAGCATCAACTCGGATTCCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS CCA 72 bp TGGTCTAGCACCCACTTCTGCTCAAGGGCACCTCAGTaGTCCTTCCTGGCTCACAAGTGCATACTGACACTA +
Preference number: 6 (lower is better)
Translates to: WSSTHFCSRAPQ*SFLAHKCILTL
Trigger: TAGTGTCAGTATGCACTTGTGAGCCAGGAAGGACCACTGAGGTGCCCTTGAGCAGAAGTGGGTGCTAGACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371150.5
CDS CAA 72 bp ACCTCTACAGGTGGCGGGGGTGGAATCTCGCTGATGTaGAGCTCGATTTCTTCCAGGAGGAGCTCATTCTCA +
Preference number: 6 (lower is better)
Translates to: TSTGGGGGISLM*SSISSRRSSFS
Trigger: TGAGAATGAGCTCCTCCTGGAAGAAATCGAGCTCAACATCAGCGAGATTCCACCCCCGCCACCTGTAGAGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS CAA 72 bp GTGCTCACAGTAGATACACGAGCAAGGACACAGATCTaGCAATGTGCTCAACAGGACAGGAGGCGGCTCCCA +
Preference number: 6 (lower is better)
Translates to: VLTVDTRARTQI*QCAQQDRRRLP
Trigger: TGGGAGCCGCCTCCTGTCCTGTTGAGCACATTGCAAGATCTGTGTCCTTGCTCGTGTATCTACTGTGAGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371150.5
CDS GCA 72 bp AAGAGCTGGTCTGTGGTGGTCCCAGTTTCTGGCAGATaGTGGCTCAGTGCCCGGCATGCATTAAGAAATTCT +
Preference number: 6 (lower is better)
Translates to: KSWSVVVPVSGR*WLSARHALRNS
Trigger: AGAATTTCTTAATGCATGCCGGGCACTGAGCCAGCATCTGCCAGAAACTGGGACCACCACAGACCAGCTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS GCA 72 bp GTGATTTGTGGCAGGAAGCAGACTCGCATGCTGCCCTaGAAAGCAAAACGTGGTTCCACTTTACCCGACAGT +
Preference number: 6 (lower is better)
Translates to: VICGRKQTRMLP*KAKRGSTLPDS
Trigger: ACTGTCGGGTAAAGTGGAACCACGTTTTGCTTTGCAGGGCAGCATGCGAGTCTGCTTCCTGCCACAAATCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371150.5
CDS CCA 72 bp AGCTGGTCTGTGGTGGTCCCAGTTTCTGGCAGATGCTaGCTCAGTGCCCGGCATGCATTAAGAAATTCTTCT +
Preference number: 6 (lower is better)
Translates to: SWSVVVPVSGRC*LSARHALRNSS
Trigger: AGAAGAATTTCTTAATGCATGCCGGGCACTGAGCCAGCATCTGCCAGAAACTGGGACCACCACAGACCAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS CCA 72 bp AGAGGACTGGTCTTTGGCATCTGTCTTCTCCATCTTTaGAGCGCTGACCCTCAGTGTCTCAGGCACTCTTCA +
Preference number: 6 (lower is better)
Translates to: RGLVFGICLLHL*SADPQCLRHSS
Trigger: TGAAGAGTGCCTGAGACACTGAGGGTCAGCGCTCCAAAGATGGAGAAGACAGATGCCAAAGACCAGTCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS CCA 72 bp AATGCTTCTCATGTCCACCTCTACAGGTGGCGGGGGTaGAATCTCGCTGATGTTGAGCTCGATTTCTTCCAG +
Preference number: 6 (lower is better)
Translates to: NASHVHLYRWRG*NLADVELDFFQ
Trigger: CTGGAAGAAATCGAGCTCAACATCAGCGAGATTCCACCCCCGCCACCTGTAGAGGTGGACATGAGAAGCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS CAA 90 bp GGCGTAGGGGAGCCAGGGGTGAACAACACCTCTGCTTCTCTGGCATaGTGTTCATCTTCCTTGTCCTCTAGAACTACAAGCACATTCTGG +
Preference number: 6 (lower is better)
Translates to: GVGEPGVNNTSASLA*CSSSLSSRTTSTFW
Trigger: CCAGAATGTGCTTGTAGTTCTAGAGGACAAGGAAGATGAACACAATGCCAGAGAAGCAGAGGTGTTGTTCACCCCTGGCTCCCCTACGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS CAA 90 bp TGGGCTACAGTGAACTCCAGCTCTCGAATTCTTTGCTCCCTAGCTTaGATTTCCTCTTCCTGCTGCTGGAGAGCAGTTCTGACCTGTGCC +
Preference number: 6 (lower is better)
Translates to: WATVNSSSRILCSLA*ISSSCCWRAVLTCA
Trigger: GGCACAGGTCAGAACTGCTCTCCAGCAGCAGGAAGAGGAAATCAAAGCTAGGGAGCAAAGAATTCGAGAGCTGGAGTTCACTGTAGCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS CAA 90 bp CTGTCCTTCCAGTTGGGCTACAGTGAACTCCAGCTCTCGAATTCTTaGCTCCCTAGCTTTGATTTCCTCTTCCTGCTGCTGGAGAGCAGT +
Preference number: 6 (lower is better)
Translates to: LSFQLGYSELQLSNS*LPSFDFLFLLLESS
Trigger: ACTGCTCTCCAGCAGCAGGAAGAGGAAATCAAAGCTAGGGAGCAAAGAATTCGAGAGCTGGAGTTCACTGTAGCCCAACTGGAAGGACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS TCA 72 bp GAGGTGGTCTCATACCCACCGTTAACCCCAACAAACTaGAGGTTCTTTTTGGTCCCATTACCTCCTGCACGG +
Preference number: 6 (lower is better)
Translates to: EVVSYPPLTPTN*RFFLVPLPPAR
Trigger: CCGTGCAGGAGGTAATGGGACCAAAAAGAACCTTCAGTTTGTTGGGGTTAACGGTGGGTATGAGACCACCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS GCA 72 bp GAGCTTCCAGACAACAGCCATGTCTTCATTGGTCTCTaGGGAAGCCAAGGGAGTGATCATTACGGCAGTGTA +
Preference number: 6 (lower is better)
Translates to: ELPDNSHVFIGL*GSQGSDHYGSV
Trigger: TACACTGCCGTAATGATCACTCCCTTGGCTTCCGCAGAGACCAATGAAGACATGGCTGTTGTCTGGAAGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS GCA 72 bp GGGCCCATTTCCATATGTGAGCAGCACTTAATCTCCTaGCCCTGTACACACACACATGCACGTACACACACA +
Preference number: 6 (lower is better)
Translates to: GPISICEQHLIS*PCTHTHARTHT
Trigger: TGTGTGTGTACGTGCATGTGTGTGTGTACAGGGGCAGGAGATTAAGTGCTGCTCACATATGGAAATGGGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371150.5
CDS CAA 90 bp TGCAAAGCAAAACGTGGTTCCACTTTACCCGACAGTGAAGAGGGTTaGATCTGTTACAACAGGAAGTGCTGCTCAGCCGAAGGGCCCATT +
Preference number: 6 (lower is better)
Translates to: CKAKRGSTLPDSEEG*ICYNRKCCSAEGPI
Trigger: AATGGGCCCTTCGGCTGAGCAGCACTTCCTGTTGTAACAGATCAAACCCTCTTCACTGTCGGGTAAAGTGGAACCACGTTTTGCTTTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371150.5
CDS TCA 72 bp CCATGTCTTCATTGGTCTCTGCGGAAGCCAAGGGAGTaGTCATTACGGCAGTGTAGCCAGCTTTGTTCTGAT +
Preference number: 6 (lower is better)
Translates to: PCLHWSLRKPRE*SLRQCSQLCSD
Trigger: ATCAGAACAAAGCTGGCTACACTGCCGTAATGATCACTCCCTTGGCTTCCGCAGAGACCAATGAAGACATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS TCA 72 bp AACGTGGTTCCACTTTACCCGACAGTGAAGAGGGTTTaGTCTGTTACAACAGGAAGTGCTGCTCAGCCGAAG +
Preference number: 6 (lower is better)
Translates to: NVVPLYPTVKRV*SVTTGSAAQPK
Trigger: CTTCGGCTGAGCAGCACTTCCTGTTGTAACAGATCAAACCCTCTTCACTGTCGGGTAAAGTGGAACCACGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371150.5
CDS GCA 72 bp AGTGAAGAGGGTTTGATCTGTTACAACAGGAAGTGCTaGTCAGCCGAAGGGCCCATTTCCATATGTGAGCAG +
Preference number: 6 (lower is better)
Translates to: SEEGLICYNRKC*SAEGPISICEQ
Trigger: CTGCTCACATATGGAAATGGGCCCTTCGGCTGAGCAGCACTTCCTGTTGTAACAGATCAAACCCTCTTCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371150.5
CDS GCA 72 bp GACAGTGAAGAGGGTTTGATCTGTTACAACAGGAAGTaGTGCTCAGCCGAAGGGCCCATTTCCATATGTGAG +
Preference number: 6 (lower is better)
Translates to: DSEEGLICYNRK*CSAEGPISICE
Trigger: CTCACATATGGAAATGGGCCCTTCGGCTGAGCAGCACTTCCTGTTGTAACAGATCAAACCCTCTTCACTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371150.5
CDS CAA 72 bp GAGCCAGGGGTGAACAACACCTCTGCTTCTCTGGCATaGTGTTCATCTTCCTTGTCCTCTAGAACTACAAGC +
Preference number: 6 (lower is better)
Translates to: EPGVNNTSASLA*CSSSLSSRTTS
Trigger: GCTTGTAGTTCTAGAGGACAAGGAAGATGAACACAATGCCAGAGAAGCAGAGGTGTTGTTCACCCCTGGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS CAA 72 bp GTGAACTCCAGCTCTCGAATTCTTTGCTCCCTAGCTTaGATTTCCTCTTCCTGCTGCTGGAGAGCAGTTCTG +
Preference number: 6 (lower is better)
Translates to: VNSSSRILCSLA*ISSSCCWRAVL
Trigger: CAGAACTGCTCTCCAGCAGCAGGAAGAGGAAATCAAAGCTAGGGAGCAAAGAATTCGAGAGCTGGAGTTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS CAA 72 bp CAGTTGGGCTACAGTGAACTCCAGCTCTCGAATTCTTaGCTCCCTAGCTTTGATTTCCTCTTCCTGCTGCTG +
Preference number: 6 (lower is better)
Translates to: QLGYSELQLSNS*LPSFDFLFLLL
Trigger: CAGCAGCAGGAAGAGGAAATCAAAGCTAGGGAGCAAAGAATTCGAGAGCTGGAGTTCACTGTAGCCCAACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS GCA 72 bp GCAGCACTTAATCTCCTGCCCCTGTACACACACACATaGACGTACACACACACATGCACGCAGAGAAAATAT +
Preference number: 6 (lower is better)
Translates to: AALNLLPLYTHT*TYTHTCTQRKY
Trigger: ATATTTTCTCTGCGTGCATGTGTGTGTGTACGTGCATGTGTGTGTGTACAGGGGCAGGAGATTAAGTGCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371150.5
CDS CAA 72 bp TCTCTTAAGAGCTTCCAGACAACAGCCATGTCTTCATaGGTCTCTGCGGAAGCCAAGGGAGTGATCATTACG +
Preference number: 6 (lower is better)
Translates to: SLKSFQTTAMSS*VSAEAKGVIIT
Trigger: CGTAATGATCACTCCCTTGGCTTCCGCAGAGACCAATGAAGACATGGCTGTTGTCTGGAAGCTCTTAAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317477.8
ENST00000354381.3
ENST00000371150.5
ENST00000371153.9
CDS CAA 72 bp AAACGTGGTTCCACTTTACCCGACAGTGAAGAGGGTTaGATCTGTTACAACAGGAAGTGCTGCTCAGCCGAA +
Preference number: 6 (lower is better)
Translates to: KRGSTLPDSEEG*ICYNRKCCSAE
Trigger: TTCGGCTGAGCAGCACTTCCTGTTGTAACAGATCAAACCCTCTTCACTGTCGGGTAAAGTGGAACCACGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371150.5
CDS CAA 90 bp GCTAGAACTAGCACTGAAACAATGAGAAAGCAGTCAAATTGTGATTaGTGGCAGGAAGCAGACTCGCATGCTGCCCTGCAAAGCAAAACG +
Preference number: 6 (lower is better)
Translates to: ARTSTETMRKQSNCD*WQEADSHAALQSKT
Trigger: CGTTTTGCTTTGCAGGGCAGCATGCGAGTCTGCTTCCTGCCACAAATCACAATTTGACTGCTTTCTCATTGTTTCAGTGCTAGTTCTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371150.5
CDS TCA 72 bp CTGCAAAGCAAAACGTGGTTCCACTTTACCCGACAGTaGAGAGGGTTTGATCTGTTACAACAGGAAGTGCTG +
Preference number: 6 (lower is better)
Translates to: LQSKTWFHFTRQ*RGFDLLQQEVL
Trigger: CAGCACTTCCTGTTGTAACAGATCAAACCCTCTTCACTGTCGGGTAAAGTGGAACCACGTTTTGCTTTGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371150.5
CDS GCA 72 bp AGGCTGAAGTTTCGGGGCAGAGTGCTAAATTTGGCCTaGTTGGCCCTTCTGTGGATAGGAATTCTTTTGATA +
Preference number: 6 (lower is better)
Translates to: RLKFRGRVLNLA*LALLWIGILLI
Trigger: TATCAAAAGAATTCCTATCCACAGAAGGGCCAAGCAGGCCAAATTTAGCACTCTGCCCCGAAACTTCAGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371153.9
CDS GCA 72 bp CCCCTGTACACACACACATGCACGTACACACACACATaGACGCAGAGAAAATATTCAGTGAACTATACCAGA +
Preference number: 6 (lower is better)
Translates to: PLYTHTCTYTHT*TQRKYSVNYTR
Trigger: TCTGGTATAGTTCACTGAATATTTTCTCTGCGTGCATGTGTGTGTGTACGTGCATGTGTGTGTGTACAGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371150.5
CDS GCA 72 bp AATGTTTTGGGGACCTCTTGGAGGAGCCTTGCTTTCTaGTCAATGTTGGGAGAACTGTCTCTGTTAACAATG +
Preference number: 6 (lower is better)
Translates to: NVLGTSWRSLAF*SMLGELSLLTM
Trigger: CATTGTTAACAGAGACAGTTCTCCCAACATTGAGCAGAAAGCAAGGCTCCTCCAAGAGGTCCCCAAAACATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371150.5
CDS CAA 72 bp TGTAAATCAATGTTTTGGGGACCTCTTGGAGGAGCCTaGCTTTCTGCTCAATGTTGGGAGAACTGTCTCTGT +
Preference number: 6 (lower is better)
Translates to: CKSMFWGPLGGA*LSAQCWENCLC
Trigger: ACAGAGACAGTTCTCCCAACATTGAGCAGAAAGCAAGGCTCCTCCAAGAGGTCCCCAAAACATTGATTTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371150.5
CDS CAA 72 bp GAACCAGATCATGTAAATCAATGTTTTGGGGACCTCTaGGAGGAGCCTTGCTTTCTGCTCAATGTTGGGAGA +
Preference number: 6 (lower is better)
Translates to: EPDHVNQCFGDL*EEPCFLLNVGR
Trigger: TCTCCCAACATTGAGCAGAAAGCAAGGCTCCTCCAAGAGGTCCCCAAAACATTGATTTACATGATCTGGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371150.5