RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KANK3 (Homo sapiens)

Ensembl gene IDs: ENSG00000186994

Ensembl transcript IDs: ENST00000330915.7, ENST00000593331.1, ENST00000593649.5, ENST00000595639.1, ENST00000610351.1

Found 250 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR TCA 90 bp TTATTAGCAAAGAAGTTTCAGAGAGTGGGTGGATCAGGGCTCTATCACTTGGTCCGCCAAAGGCTGAGGTaGCTGACGAGGAGATCTCCC +
Preference number: 2 (lower is better)
Translates to: LLAKKFQRVGGSGLYHLVRQRLR*LTRRSP
Trigger: GGGAGATCTCCTCGTCAGTCACCTCAGCCTTTGGCG...GACCAAGTGATAGAGCCCTGATCCACCCACTCTCTGAAACTTCTTTGCTAATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330915.7
3UTR-3UTR TCA 90 bp AAGAAGTTTCAGAGAGTGGGTGGATCAGGGCTCTATCACTTGGTCCCCACCTCACACAGTCACCCCAACTaGAATTGCCTTTCTCTTCGG +
Preference number: 2 (lower is better)
Translates to: KKFQRVGGSGLYHLVPTSHSHPN*NCLSLR
Trigger: CCGAAGAGAAAGGCAATTTCAGTTGGGGTGACTGTG...TGAGGTGGGGACCAAGTGATAGAGCCCTGATCCACCCACTCTCTGAAACTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330915.7
3UTR CCA 72 bp TCAGGGCTCTATCACTTGGTCCCCACCTCACCTTGGTaGGGCCAGAGTGAGCCCCTTCCTGCCACAGTCACC +
Preference number: 3 (lower is better)
Translates to: SGLYHLVPTSPW*GQSEPLPATVT
Trigger: GGTGACTGTGGCAGGAAGGGGCTCACTCTGGCCCCACCAAGGTGAGGTGGGGACCAAGTGATAGAGCCCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330915.7
3UTR CCA 72 bp GAATGTTTTATTAGCAAAGAAGTTTCAGAGAGTGGGTaGATCAGGGCTCTATCACTTGGTCCCCACCTCACC +
Preference number: 3 (lower is better)
Translates to: ECFISKEVSESG*IRALSLGPHLT
Trigger: GGTGAGGTGGGGACCAAGTGATAGAGCCCTGATCCACCCACTCTCTGAAACTTCTTTGCTAATAAAACATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330915.7
3UTR CCA 72 bp AATAAAATAAACTCAAGGAGGAGTGGTGCCCTGTGCTaGACAGCCATTCTCTGCTTTCCTCTCCAGAGTCTT +
Preference number: 3 (lower is better)
Translates to: NKINSRRSGALC*TAILCFPLQSL
Trigger: AAGACTCTGGAGAGGAAAGCAGAGAATGGCTGTCCAGCACAGGGCACCACTCCTCCTTGAGTTTATTTTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610351.1
CDS-3UTR TCA 90 bp GTGTTAGCCTCTGAGCAGGGGACCCTGGACCCTTCTGTGCGCCAAAGGCTGAGGGCCACGGGCTCCGCCTaGGAGCGCCGCTGGCTGGAC +
Preference number: 4 (lower is better)
Translates to: VLASEQGTLDPSVRQRLRATGSA*ERRWLD
Trigger: GTCCAGCCAGCGGCGCTCTCAGGCGGAGCCCGTGGC...CCTCAGCCTTTGGCGCACAGAAGGGTCCAGGGTCCCCTGCTCAGAGGCTAACAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330915.7
CDS-3UTR GCA 90 bp GGGGACCCTGGACCCTTCTGTGCGCCAAAGGCTGAGGTGACTGACGAGGAGATCCGCAGCGCGCGCACCTaGTCCTGCAGCTCGGGCAGC +
Preference number: 4 (lower is better)
Translates to: GDPGPFCAPKAEVTDEEIRSART*SCSSGS
Trigger: GCTGCCCGAGCTGCAGGAGCAGGTGCGCGCGCTGCG...GATCTCCTCGTCAGTCACCTCAGCCTTTGGCGCACAGAAGGGTCCAGGGTCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330915.7
CDS-3UTR CCA 90 bp CTTCGGCCAGTGTTAGCCTCTGAGCAGGGGACCCTGGACCCTTCTGTGCGCCAATCCCCGTCGAGGACCTaGAGCGCGCCCTCGCTGCGC +
Preference number: 4 (lower is better)
Translates to: LRPVLASEQGTLDPSVRQSPSRT*SAPSLR
Trigger: GCGCAGCGAGGGCGCGCTCCAGGTCCTCGACGGGGA...TTGGCGCACAGAAGGGTCCAGGGTCCCCTGCTCAGAGGCTAACACTGGCCGAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330915.7
CDS-3UTR GCA 90 bp TGGGTGGATCAGGGCTCTATCACTTGGTCCCCACCTCACCTTGGTGGGGCCAGACGCGGCGACAGCGGCTaGATCAGGAGCCCCGAGGGC +
Preference number: 4 (lower is better)
Translates to: WVDQGSITWSPPHLGGARRGDSG*IRSPEG
Trigger: GCCCTCGGGGCTCCTGATGCAGCCGCTGTCGCCGCG...TCTGGCCCCACCAAGGTGAGGTGGGGACCAAGTGATAGAGCCCTGATCCACCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000330915.7
CDS-3UTR GCA 90 bp GATCAGGGCTCTATCACTTGGTCCCCACCTCACCTTGGTGGGGCCAGAGTGAGCGCGCGCTCGTGTGTCTaGGCCAGCTCCAGCCGCCGG +
Preference number: 4 (lower is better)
Translates to: DQGSITWSPPHLGGARVSARSCV*ASSSRR
Trigger: CCGGCGGCTGGAGCTGGCGCAGACACACGAGCGCGC...GCTCACTCTGGCCCCACCAAGGTGAGGTGGGGACCAAGTGATAGAGCCCTGATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330915.7
CDS-3UTR GCA 90 bp GATCAGGGCTCTATCACTTGGTCCCCACCTCACCTTGGTGGGGCCAGAGTGAGCGCCCTCGCTGCGCCCTaGAGCCAGGCCGTCTGGGCT +
Preference number: 4 (lower is better)
Translates to: DQGSITWSPPHLGGARVSALAAP*SQAVWA
Trigger: AGCCCAGACGGCCTGGCTGCAGGGCGCAGCGAGGGC...GCTCACTCTGGCCCCACCAAGGTGAGGTGGGGACCAAGTGATAGAGCCCTGATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330915.7
CDS-3UTR GCA 90 bp GAGTGGGTGGATCAGGGCTCTATCACTTGGTCCCCACCTCACCTTGGTGGGGCCCAAGGAGGGCGCCTCTaGCGGGGACTCGGTCTGCGC +
Preference number: 4 (lower is better)
Translates to: EWVDQGSITWSPPHLGGAQGGRL*RGLGLR
Trigger: GCGCAGACCGAGTCCCCGGCAGAGGCGCCCTCCTTG...GGCCCCACCAAGGTGAGGTGGGGACCAAGTGATAGAGCCCTGATCCACCCACTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000330915.7
CDS-3UTR CCA 90 bp GAGTGGGTGGATCAGGGCTCTATCACTTGGTCCCCACCTCACCTTGGTGGGGCCCCCGAGGGCGCGCCCTaGGAGAGTATGCCCGGTGCT +
Preference number: 4 (lower is better)
Translates to: EWVDQGSITWSPPHLGGAPEGAP*ESMPGA
Trigger: AGCACCGGGCATACTCTCCCAGGGCGCGCCCTCGGG...GGCCCCACCAAGGTGAGGTGGGGACCAAGTGATAGAGCCCTGATCCACCCACTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000330915.7
CDS-3UTR GCA 90 bp TGCCTTTCTCTTCGGCCAGTGTTAGCCTCTGAGCAGGGGACCCTGGACCCTTCTTGGGAGGGCCAGGGGTaGCCGAGTCGGATCCCCCGC +
Preference number: 4 (lower is better)
Translates to: CLSLRPVLASEQGTLDPSWEGQG*PSRIPR
Trigger: GCGGGGGATCCGACTCGGGCACCCCTGGCCCTCCCA...AGAAGGGTCCAGGGTCCCCTGCTCAGAGGCTAACACTGGCCGAAGAGAAAGGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000330915.7
CDS-3UTR GCA 90 bp TGCCTTTCTCTTCGGCCAGTGTTAGCCTCTGAGCAGGGGACCCTGGACCCTTCTCGGGGCCGGCTCAGCTaGCGCTGCAGCGCTACGCAC +
Preference number: 4 (lower is better)
Translates to: CLSLRPVLASEQGTLDPSRGRLS*RCSATH
Trigger: GTGCGTAGCGCTGCAGCGGCAGCTGAGCCGGCCCCG...AGAAGGGTCCAGGGTCCCCTGCTCAGAGGCTAACACTGGCCGAAGAGAAAGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330915.7
CDS-3UTR CCA 90 bp GTGGATCAGGGCTCTATCACTTGGTCCCCACCTCACCTTGGTGGGGCCAGAGTGGGCAGCGTTCGCGCCTaGTCCTCGAGCTCGCGCAGG +
Preference number: 4 (lower is better)
Translates to: VDQGSITWSPPHLGGARVGSVRA*SSSSRR
Trigger: CCTGCGCGAGCTCGAGGACCAGGCGCGAACGCTGCC...CACTCTGGCCCCACCAAGGTGAGGTGGGGACCAAGTGATAGAGCCCTGATCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330915.7
CDS-3UTR CCA 90 bp GCTGAGGTGACTGACGAGGAGATCTCCCCACAGCTAGGTGTAGTGAGCCAGACGGTGAGCCGCCGCAGCTaGGCGAGCTTGTCCGGGCGC +
Preference number: 4 (lower is better)
Translates to: AEVTDEEISPQLGVVSQTVSRRS*ASLSGR
Trigger: GCGCCCGGACAAGCTCGCCCAGCTGCGGCGGCTCAC...CGTCTGGCTCACTACACCTAGCTGTGGGGAGATCTCCTCGTCAGTCACCTCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330915.7
CDS-3UTR CCA 90 bp CTTCGGCCAGTGTTAGCCTCTGAGCAGGGGACCCTGGACCCTTCTGTGCGCCAATCCACGGGGTCTGGGTaGTGGCCTCGCGTAGCTGGG +
Preference number: 4 (lower is better)
Translates to: LRPVLASEQGTLDPSVRQSTGSG*WPRVAG
Trigger: CCCAGCTACGCGAGGCCACCACCCAGACCCCGTGGA...TTGGCGCACAGAAGGGTCCAGGGTCCCCTGCTCAGAGGCTAACACTGGCCGAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330915.7
CDS-3UTR CCA 90 bp GTGTTAGCCTCTGAGCAGGGGACCCTGGACCCTTCTGTGCGCCAAAGGCTGAGGCAGCCTCCAGGGCGATaGCCAGGGCACTGGTGCCCT +
Preference number: 4 (lower is better)
Translates to: VLASEQGTLDPSVRQRLRQPPGR*PGHWCP
Trigger: AGGGCACCAGTGCCCTGGCCATCGCCCTGGAGGCTG...CCTCAGCCTTTGGCGCACAGAAGGGTCCAGGGTCCCCTGCTCAGAGGCTAACAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330915.7
CDS-3UTR CCA 90 bp GTGTTAGCCTCTGAGCAGGGGACCCTGGACCCTTCTGTGCGCCAAAGGCTGAGGCTCTGGGTGTCGGGCTaGCCCGAGCTCAGGTGGGCA +
Preference number: 4 (lower is better)
Translates to: VLASEQGTLDPSVRQRLRLWVSG*PELRWA
Trigger: TGCCCACCTGAGCTCGGGCCAGCCCGACACCCAGAG...CCTCAGCCTTTGGCGCACAGAAGGGTCCAGGGTCCCCTGCTCAGAGGCTAACAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330915.7
CDS-3UTR GCA 90 bp TGGGTGGATCAGGGCTCTATCACTTGGTCCCCACCTCACCTTGGTGGGGCCAGAAGCGCCGCGGCCATCTaGTCGCGCACCAGCTGCAGT +
Preference number: 4 (lower is better)
Translates to: WVDQGSITWSPPHLGGARSAAAI*SRTSCS
Trigger: ACTGCAGCTGGTGCGCGAGCAGATGGCCGCGGCGCT...TCTGGCCCCACCAAGGTGAGGTGGGGACCAAGTGATAGAGCCCTGATCCACCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330915.7
CDS-3UTR GCA 90 bp AGAGAGTGGGTGGATCAGGGCTCTATCACTTGGTCCCCACCTCACCTTGGTGGGCGGCTCAGCTGCCGCTaGAGCGCTACGCACGCCTCC +
Preference number: 4 (lower is better)
Translates to: REWVDQGSITWSPPHLGGRLSCR*SATHAS
Trigger: GGAGGCGTGCGTAGCGCTGCAGCGGCAGCTGAGCCG...CCCACCAAGGTGAGGTGGGGACCAAGTGATAGAGCCCTGATCCACCCACTCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330915.7
CDS-3UTR GCA 90 bp GAGTGGGTGGATCAGGGCTCTATCACTTGGTCCCCACCTCACCTTGGTGGGGCCGCGGCCACCTCATCCTaGTCAGCCTCCAGGGCGATG +
Preference number: 4 (lower is better)
Translates to: EWVDQGSITWSPPHLGGAAATSS*SASRAM
Trigger: CATCGCCCTGGAGGCTGAGCAGGATGAGGTGGCCGC...GGCCCCACCAAGGTGAGGTGGGGACCAAGTGATAGAGCCCTGATCCACCCACTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330915.7
CDS-3UTR CCA 90 bp GCTGAGGTGACTGACGAGGAGATCTCCCCACAGCTAGGTGTAGTGAGCCAGACGTGCAGCCAGGCCGTCTaGGCTGTCAGCCCGGGGGCT +
Preference number: 4 (lower is better)
Translates to: AEVTDEEISPQLGVVSQTCSQAV*AVSPGA
Trigger: AGCCCCCGGGCTGACAGCCCAGACGGCCTGGCTGCA...CGTCTGGCTCACTACACCTAGCTGTGGGGAGATCTCCTCGTCAGTCACCTCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330915.7
CDS-3UTR CCA 90 bp TGCCTTTCTCTTCGGCCAGTGTTAGCCTCTGAGCAGGGGACCCTGGACCCTTCTGTCTCCGGCACGGCCTaGGCACCCGCTTCTCGGGTC +
Preference number: 4 (lower is better)
Translates to: CLSLRPVLASEQGTLDPSVSGTA*APASRV
Trigger: GACCCGAGAAGCGGGTGCCCAGGCCGTGCCGGAGAC...AGAAGGGTCCAGGGTCCCCTGCTCAGAGGCTAACACTGGCCGAAGAGAAAGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330915.7
CDS-3UTR CCA 90 bp GTGGATCAGGGCTCTATCACTTGGTCCCCACCTCACCTTGGTGGGGCCAGAGTGCAGCTCCACGGGGTCTaGGTGGTGGCCTCGCGTAGC +
Preference number: 4 (lower is better)
Translates to: VDQGSITWSPPHLGGARVQLHGV*VVASRS
Trigger: GCTACGCGAGGCCACCACCCAGACCCCGTGGAGCTG...CACTCTGGCCCCACCAAGGTGAGGTGGGGACCAAGTGATAGAGCCCTGATCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000330915.7
CDS-3UTR CCA 90 bp GAGTGGGTGGATCAGGGCTCTATCACTTGGTCCCCACCTCACCTTGGTGGGGCCGGTCCGGAGCTGGGTTaGGCACCAGGTGTGCCGTCT +
Preference number: 4 (lower is better)
Translates to: EWVDQGSITWSPPHLGGAGPELG*APGVPS
Trigger: AGACGGCACACCTGGTGCCCAACCCAGCTCCGGACC...GGCCCCACCAAGGTGAGGTGGGGACCAAGTGATAGAGCCCTGATCCACCCACTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330915.7
CDS-3UTR CCA 90 bp GTGTTAGCCTCTGAGCAGGGGACCCTGGACCCTTCTGTGCGCCAAAGGCTGAGGGTCCCCACCTCACCTTaGTGGGGCCAGAGTGAGCCC +
Preference number: 4 (lower is better)
Translates to: VLASEQGTLDPSVRQRLRVPTSP*WGQSEP
Trigger: GGGCTCACTCTGGCCCCACCAAGGTGAGGTGGGGAC...CCTCAGCCTTTGGCGCACAGAAGGGTCCAGGGTCCCCTGCTCAGAGGCTAACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000330915.7
CDS-3UTR TCA 90 bp CCCTTCCTGCCACAGTCACCCCAACTGAAATTGCCTTTCTCTTCGGCCAGTGTTTGGCCAGGCGCTCGGTaGGCCGCCGCAGCTGGGCGA +
Preference number: 4 (lower is better)
Translates to: PFLPQSPQLKLPFSSASVWPGAR*AAAAGR
Trigger: TCGCCCAGCTGCGGCGGCTCACCGAGCGCCTGGCCA...AACACTGGCCGAAGAGAAAGGCAATTTCAGTTGGGGTGACTGTGGCAGGAAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330915.7
CDS-3UTR TCA 90 bp GCTGAGGTGACTGACGAGGAGATCTCCCCACAGCTAGGTGTAGTGAGCCAGACGCCGGGCGAGCTCTCCTaGGTCAAGGAGGGCGCCTCT +
Preference number: 4 (lower is better)
Translates to: AEVTDEEISPQLGVVSQTPGELS*VKEGAS
Trigger: AGAGGCGCCCTCCTTGACTCAGGAGAGCTCGCCCGG...CGTCTGGCTCACTACACCTAGCTGTGGGGAGATCTCCTCGTCAGTCACCTCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330915.7
CDS-3UTR GCA 90 bp CCAAAGGCTGAGGTGACTGACGAGGAGATCTCCCCACAGCTAGGTGTAGTGAGCGCGCGCACCTGCTCCTaGAGCTCGGGCAGCGTTCGC +
Preference number: 4 (lower is better)
Translates to: PKAEVTDEEISPQLGVVSARTCS*SSGSVR
Trigger: GCGAACGCTGCCCGAGCTGCAGGAGCAGGTGCGCGC...GCTCACTACACCTAGCTGTGGGGAGATCTCCTCGTCAGTCACCTCAGCCTTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330915.7
CDS-3UTR GCA 90 bp TGCCTTTCTCTTCGGCCAGTGTTAGCCTCTGAGCAGGGGACCCTGGACCCTTCTGCCGGGGACTCGGTCTaGGCGGCCTTTTCGGCACAG +
Preference number: 4 (lower is better)
Translates to: CLSLRPVLASEQGTLDPSAGDSV*AAFSAQ
Trigger: CTGTGCCGAAAAGGCCGCGCAGACCGAGTCCCCGGC...AGAAGGGTCCAGGGTCCCCTGCTCAGAGGCTAACACTGGCCGAAGAGAAAGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000330915.7
CDS-3UTR CCA 90 bp CCAAAGGCTGAGGTGACTGACGAGGAGATCTCCCCACAGCTAGGTGTAGTGAGCGGATGTCCAGGCGCCTaGGCTACGTGCGCCCGCGAG +
Preference number: 4 (lower is better)
Translates to: PKAEVTDEEISPQLGVVSGCPGA*ATCARE
Trigger: CTCGCGGGCGCACGTAGCCCAGGCGCCTGGACATCC...GCTCACTACACCTAGCTGTGGGGAGATCTCCTCGTCAGTCACCTCAGCCTTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330915.7
CDS-3UTR CCA 90 bp AGAGAGTGGGTGGATCAGGGCTCTATCACTTGGTCCCCACCTCACCTTGGTGGGTGGCCAGGGACTCGCTaGATGTCCAGGCGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: REWVDQGSITWSPPHLGGWPGTR*MSRRLG
Trigger: GCCCAGGCGCCTGGACATCCAGCGAGTCCCTGGCCA...CCCACCAAGGTGAGGTGGGGACCAAGTGATAGAGCCCTGATCCACCCACTCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330915.7
CDS-3UTR CCA 90 bp CTTCGGCCAGTGTTAGCCTCTGAGCAGGGGACCCTGGACCCTTCTGTGCGCCAACTCCACCGTCGTCACTaGCCAGGGACTCGCTGGATG +
Preference number: 4 (lower is better)
Translates to: LRPVLASEQGTLDPSVRQLHRRH*PGTRWM
Trigger: CATCCAGCGAGTCCCTGGCCAGTGACGACGGTGGAG...TTGGCGCACAGAAGGGTCCAGGGTCCCCTGCTCAGAGGCTAACACTGGCCGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330915.7
CDS-3UTR CCA 90 bp TCAGAGAGTGGGTGGATCAGGGCTCTATCACTTGGTCCCCACCTCACCTTGGTGACGGGGTCTGGGTGGTaGCCTCGCGTAGCTGGGCCC +
Preference number: 4 (lower is better)
Translates to: SESGWIRALSLGPHLTLVTGSGW*PRVAGP
Trigger: GGGCCCAGCTACGCGAGGCCACCACCCAGACCCCGT...CACCAAGGTGAGGTGGGGACCAAGTGATAGAGCCCTGATCCACCCACTCTCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330915.7
CDS-3UTR CCA 90 bp GAGTGGGTGGATCAGGGCTCTATCACTTGGTCCCCACCTCACCTTGGTGGGGCCTCTTGGGTCCGGAGCTaGGTTGGGCACCAGGTGTGC +
Preference number: 4 (lower is better)
Translates to: EWVDQGSITWSPPHLGGASWVRS*VGHQVC
Trigger: GCACACCTGGTGCCCAACCCAGCTCCGGACCCAAGA...GGCCCCACCAAGGTGAGGTGGGGACCAAGTGATAGAGCCCTGATCCACCCACTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330915.7
CDS-3UTR CCA 90 bp GGCCAGAGTGAGCCCCTTCCTGCCACAGTCACCCCAACTGAAATTGCCTTTCTCGGGGGTGACTCGCTCTaGGTGTCGGGCTGGCCCGAG +
Preference number: 4 (lower is better)
Translates to: GQSEPLPATVTPTEIAFLGGDSL*VSGWPE
Trigger: CTCGGGCCAGCCCGACACCCAGAGCGAGTCACCCCC...GAGAAAGGCAATTTCAGTTGGGGTGACTGTGGCAGGAAGGGGCTCACTCTGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000330915.7
CDS-3UTR CCA 90 bp CTTCGGCCAGTGTTAGCCTCTGAGCAGGGGACCCTGGACCCTTCTGTGCGCCAACCCACCTCACCTTGGTaGGGCCAGAGTGAGCCCCTT +
Preference number: 4 (lower is better)
Translates to: LRPVLASEQGTLDPSVRQPTSPW*GQSEPL
Trigger: AAGGGGCTCACTCTGGCCCCACCAAGGTGAGGTGGG...TTGGCGCACAGAAGGGTCCAGGGTCCCCTGCTCAGAGGCTAACACTGGCCGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330915.7
CDS-3UTR TCA 90 bp GTTTCAGAGAGTGGGTGGATCAGGGCTCTATCACTTGGTCCCCACCTCACCTTGCTGTCAGAGGCACCCTaGAGCCGCAGCCCCAGCCGC +
Preference number: 4 (lower is better)
Translates to: VSESGWIRALSLGPHLTLLSEAP*SRSPSR
Trigger: GCGGCTGGGGCTGCGGCTTCAGGGTGCCTCTGACAG...CAAGGTGAGGTGGGGACCAAGTGATAGAGCCCTGATCCACCCACTCTCTGAAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330915.7
CDS-3UTR CCA 90 bp CCAAAGGCTGAGGTGACTGACGAGGAGATCTCCCCACAGCTAGGTGTAGTGAGCCGCACCAGCTGCAGTTaGGCAGGGCCGGGCGAAGCA +
Preference number: 4 (lower is better)
Translates to: PKAEVTDEEISPQLGVVSRTSCS*AGPGEA
Trigger: TGCTTCGCCCGGCCCTGCCCAACTGCAGCTGGTGCG...GCTCACTACACCTAGCTGTGGGGAGATCTCCTCGTCAGTCACCTCAGCCTTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330915.7
CDS-3UTR CCA 90 bp GATCAGGGCTCTATCACTTGGTCCCCACCTCACCTTGGTGGGGCCAGAGTGAGCCTCCTTCACCAGGTGTaGCTGTCTGGGAGCCAGGGG +
Preference number: 4 (lower is better)
Translates to: DQGSITWSPPHLGGARVSLLHQV*LSGSQG
Trigger: CCCCTGGCTCCCAGACAGCCACACCTGGTGAAGGAG...GCTCACTCTGGCCCCACCAAGGTGAGGTGGGGACCAAGTGATAGAGCCCTGATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330915.7
CDS-3UTR GCA 90 bp CCAGTGTTAGCCTCTGAGCAGGGGACCCTGGACCCTTCTGTGCGCCAAAGGCTGAGGACCCCAACAAACTaGAGGCTCTTGGGTCCGGAG +
Preference number: 4 (lower is better)
Translates to: PVLASEQGTLDPSVRQRLRTPTN*RLLGPE
Trigger: CTCCGGACCCAAGAGCCTGCAGTTTGTTGGGGTCCT...CAGCCTTTGGCGCACAGAAGGGTCCAGGGTCCCCTGCTCAGAGGCTAACACTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330915.7
CDS-3UTR GCA 90 bp CCAAAGGCTGAGGTGACTGACGAGGAGATCTCCCCACAGCTAGGTGTAGTGAGCCTCGCACCTCCCCTGTaGCACCTGCTGAGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: PKAEVTDEEISPQLGVVSLAPPL*HLLRLC
Trigger: GCAGAGCCTCAGCAGGTGGCACAGGGGAGGTGCGAG...GCTCACTACACCTAGCTGTGGGGAGATCTCCTCGTCAGTCACCTCAGCCTTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330915.7
CDS-3UTR GCA 90 bp GTGGATCAGGGCTCTATCACTTGGTCCCCACCTCACCTTGGTGGGGCCAGAGTGCCTCACAGAGGTGAGTaGAGCCAGCATGAGGGCCGA +
Preference number: 4 (lower is better)
Translates to: VDQGSITWSPPHLGGARVPHRGE*SQHEGR
Trigger: TCGGCCCTCATGCTGGCTGCACTCACCTCTGTGAGG...CACTCTGGCCCCACCAAGGTGAGGTGGGGACCAAGTGATAGAGCCCTGATCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330915.7
CDS-3UTR CCA 90 bp GATCAGGGCTCTATCACTTGGTCCCCACCTCACCTTGGTGGGGCCAGAGTGAGCCAAACTGCAGGCTCTTaGGTCCGGAGCTGGGTTGGG +
Preference number: 4 (lower is better)
Translates to: DQGSITWSPPHLGGARVSQTAGS*VRSWVG
Trigger: CCCAACCCAGCTCCGGACCCAAGAGCCTGCAGTTTG...GCTCACTCTGGCCCCACCAAGGTGAGGTGGGGACCAAGTGATAGAGCCCTGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330915.7
CDS-3UTR CCA 90 bp AGCCCCTTCCTGCCACAGTCACCCCAACTGAAATTGCCTTTCTCTTCGGCCAGTCCCCTTCCAGCATCCTaGCCACGGGCTCCGCCTGAG +
Preference number: 4 (lower is better)
Translates to: SPFLPQSPQLKLPFSSASPLPAS*PRAPPE
Trigger: CTCAGGCGGAGCCCGTGGCCAGGATGCTGGAAGGGG...ACTGGCCGAAGAGAAAGGCAATTTCAGTTGGGGTGACTGTGGCAGGAAGGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000330915.7
CDS-3UTR CCA 90 bp GCTGAGGTGACTGACGAGGAGATCTCCCCACAGCTAGGTGTAGTGAGCCAGACGGGAGCAGGCTTGCGATaGCCAGGTTCCCGTGGGACA +
Preference number: 4 (lower is better)
Translates to: AEVTDEEISPQLGVVSQTGAGLR*PGSRGT
Trigger: TGTCCCACGGGAACCTGGCCATCGCAAGCCTGCTCC...CGTCTGGCTCACTACACCTAGCTGTGGGGAGATCTCCTCGTCAGTCACCTCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330915.7
CDS-3UTR CCA 90 bp AGAGAGTGGGTGGATCAGGGCTCTATCACTTGGTCCCCACCTCACCTTGGTGGGCACACATCAGCGCTGTaGCCCCATCCGCATCCTGCG +
Preference number: 4 (lower is better)
Translates to: REWVDQGSITWSPPHLGGHTSAL*PHPHPA
Trigger: CGCAGGATGCGGATGGGGCCACAGCGCTGATGTGTG...CCCACCAAGGTGAGGTGGGGACCAAGTGATAGAGCCCTGATCCACCCACTCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330915.7
CDS-3UTR CCA 90 bp GACCCTGGACCCTTCTGTGCGCCAAAGGCTGAGGTGACTGACGAGGAGATCTCCCGATGGCCAGGGCACTaGTGCCCTCATTGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: DPGPFCAPKAEVTDEEISRWPGH*CPHCPG
Trigger: TCCTGGACAATGAGGGCACCAGTGCCCTGGCCATCG...GGAGATCTCCTCGTCAGTCACCTCAGCCTTTGGCGCACAGAAGGGTCCAGGGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330915.7
CDS-3UTR CCA 90 bp TCAGAGAGTGGGTGGATCAGGGCTCTATCACTTGGTCCCCACCTCACCTTGGTGTGGCCCGAGCTCAGGTaGGCATGTAGCAGAGCGGCC +
Preference number: 4 (lower is better)
Translates to: SESGWIRALSLGPHLTLVWPELR*ACSRAA
Trigger: GGCCGCTCTGCTACATGCCCACCTGAGCTCGGGCCA...CACCAAGGTGAGGTGGGGACCAAGTGATAGAGCCCTGATCCACCCACTCTCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330915.7
CDS-3UTR GCA 90 bp AGCCCCTTCCTGCCACAGTCACCCCAACTGAAATTGCCTTTCTCTTCGGCCAGTCGCCCTGGGAGAGTATaGCCGGTGCTCCACCGTCGT +
Preference number: 4 (lower is better)
Translates to: SPFLPQSPQLKLPFSSASRPGRV*PVLHRR
Trigger: ACGACGGTGGAGCACCGGGCATACTCTCCCAGGGCG...ACTGGCCGAAGAGAAAGGCAATTTCAGTTGGGGTGACTGTGGCAGGAAGGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330915.7
CDS-3UTR GCA 90 bp AAGAAGTTTCAGAGAGTGGGTGGATCAGGGCTCTATCACTTGGTCCCCACCTCAGTCTCCCGGAGCGTGTaGTCGACGCGCGGGTTGCGC +
Preference number: 4 (lower is better)
Translates to: KKFQRVGGSGLYHLVPTSVSRSV*STRGLR
Trigger: GCGCAACCCGCGCGTCGAGCACACGCTCCGGGAGAC...TGAGGTGGGGACCAAGTGATAGAGCCCTGATCCACCCACTCTCTGAAACTTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330915.7
CDS-3UTR GCA 90 bp AGTGAGCCCCTTCCTGCCACAGTCACCCCAACTGAAATTGCCTTTCTCTTCGGCGCCAGGTTCACCACGTaGGCCAGCAGTTCGGGTCCC +
Preference number: 4 (lower is better)
Translates to: SEPLPATVTPTEIAFLFGARFTT*ASSSGP
Trigger: GGGACCCGAACTGCTGGCGCACGTGGTGAACCTGGC...GCCGAAGAGAAAGGCAATTTCAGTTGGGGTGACTGTGGCAGGAAGGGGCTCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330915.7
CDS-3UTR GCA 90 bp AGAGAGTGGGTGGATCAGGGCTCTATCACTTGGTCCCCACCTCACCTTGGTGGGATCCAGGAGCAGGCTTaGGATGGCCAGGTTCCCGTG +
Preference number: 4 (lower is better)
Translates to: REWVDQGSITWSPPHLGGIQEQA*DGQVPV
Trigger: CACGGGAACCTGGCCATCGCAAGCCTGCTCCTGGAT...CCCACCAAGGTGAGGTGGGGACCAAGTGATAGAGCCCTGATCCACCCACTCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330915.7
CDS-3UTR CCA 90 bp GAGCCCCTTCCTGCCACAGTCACCCCAACTGAAATTGCCTTTCTCTTCGGCCAGACTCGAAACCACTCCTaGGCCACGAGGCGCACTGCG +
Preference number: 4 (lower is better)
Translates to: EPLPATVTPTEIAFLFGQTRNHS*ATRRTA
Trigger: CGCAGTGCGCCTCGTGGCCCAGGAGTGGTTTCGAGT...CTGGCCGAAGAGAAAGGCAATTTCAGTTGGGGTGACTGTGGCAGGAAGGGGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330915.7
CDS-3UTR CCA 90 bp GATCAGGGCTCTATCACTTGGTCCCCACCTCACCTTGGTGGGGCCAGAGTGAGCCCTCATTGTCCAGGATaGCAGGGTCACAGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: DQGSITWSPPHLGGARVSPHCPG*QGHSLA
Trigger: AGCCAGGCTGTGACCCTGCCATCCTGGACAATGAGG...GCTCACTCTGGCCCCACCAAGGTGAGGTGGGGACCAAGTGATAGAGCCCTGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330915.7
CDS-3UTR TCA 90 bp CTTCGGCCAGTGTTAGCCTCTGAGCAGGGGACCCTGGACCCTTCTGTGCGCCAATCTCGTACTCTCCGTTaGGGACCCCAACAAACTGCA +
Preference number: 4 (lower is better)
Translates to: LRPVLASEQGTLDPSVRQSRTLR*GPQQTA
Trigger: TGCAGTTTGTTGGGGTCCTCAACGGAGAGTACGAGA...TTGGCGCACAGAAGGGTCCAGGGTCCCCTGCTCAGAGGCTAACACTGGCCGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330915.7
CDS-3UTR TCA 90 bp CCAGTGTTAGCCTCTGAGCAGGGGACCCTGGACCCTTCTGTGCGCCAAAGGCTGGACTGGCCTTGGCATTaGCATCACCCATGCAGAAGA +
Preference number: 4 (lower is better)
Translates to: PVLASEQGTLDPSVRQRLDWPWH*HHPCRR
Trigger: TCTTCTGCATGGGTGATGTCAATGCCAAGGCCAGTC...CAGCCTTTGGCGCACAGAAGGGTCCAGGGTCCCCTGCTCAGAGGCTAACACTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330915.7
CDS-3UTR TCA 90 bp CCCTTCCTGCCACAGTCACCCCAACTGAAATTGCCTTTCTCTTCGGCCAGTGTTGCCAGTGTTAGCCTCTaGGCAGGGGACCCTGGACCC +
Preference number: 4 (lower is better)
Translates to: PFLPQSPQLKLPFSSASVASVSL*AGDPGP
Trigger: GGGTCCAGGGTCCCCTGCTCAGAGGCTAACACTGGC...AACACTGGCCGAAGAGAAAGGCAATTTCAGTTGGGGTGACTGTGGCAGGAAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330915.7
CDS-3UTR GCA 90 bp GACCCTGGACCCTTCTGTGCGCCAAAGGCTGAGGTGACTGACGAGGAGATCTCCCTTGGCCATGTTTCCTaGAGCAGCTGTCAGAGGCAC +
Preference number: 4 (lower is better)
Translates to: DPGPFCAPKAEVTDEEISLGHVS*SSCQRH
Trigger: GTGCCTCTGACAGCTGCTGCAGGAAACATGGCCAAG...GGAGATCTCCTCGTCAGTCACCTCAGCCTTTGGCGCACAGAAGGGTCCAGGGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330915.7
CDS-3UTR GCA 90 bp AGCCCCTTCCTGCCACAGTCACCCCAACTGAAATTGCCTTTCTCTTCGGCCAGTGGAGAGTATGCCCGGTaGTCCACCGTCGTCACTGGC +
Preference number: 4 (lower is better)
Translates to: SPFLPQSPQLKLPFSSASGEYAR*STVVTG
Trigger: GCCAGTGACGACGGTGGAGCACCGGGCATACTCTCC...ACTGGCCGAAGAGAAAGGCAATTTCAGTTGGGGTGACTGTGGCAGGAAGGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330915.7
CDS-3UTR CCA 90 bp AAGAAGTTTCAGAGAGTGGGTGGATCAGGGCTCTATCACTTGGTCCCCACCTCAGCCACCTCCCGGGTCTaGGGCGTCCCATCGAGACTC +
Preference number: 4 (lower is better)
Translates to: KKFQRVGGSGLYHLVPTSATSRV*GVPSRL
Trigger: GAGTCTCGATGGGACGCCCCAGACCCGGGAGGTGGC...TGAGGTGGGGACCAAGTGATAGAGCCCTGATCCACCCACTCTCTGAAACTTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330915.7
CDS-3UTR CCA 90 bp AGTGAGCCCCTTCCTGCCACAGTCACCCCAACTGAAATTGCCTTTCTCTTCGGCCCCTGTCTCCGTCCATaGATCCGGGCGAGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: SEPLPATVTPTEIAFLFGPCLRP*IRASSP
Trigger: AGGAGAGCTCGCCCGGATCCATGGACGGAGACAGGG...GCCGAAGAGAAAGGCAATTTCAGTTGGGGTGACTGTGGCAGGAAGGGGCTCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000330915.7
CDS-3UTR CCA 90 bp TCAGAGAGTGGGTGGATCAGGGCTCTATCACTTGGTCCCCACCTCACCTTGGTGGAGAGCGCCGCTGGCTaGACACTCGAAACCACTCCT +
Preference number: 4 (lower is better)
Translates to: SESGWIRALSLGPHLTLVESAAG*TLETTP
Trigger: AGGAGTGGTTTCGAGTGTCCAGCCAGCGGCGCTCTC...CACCAAGGTGAGGTGGGGACCAAGTGATAGAGCCCTGATCCACCCACTCTCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330915.7
CDS-3UTR CCA 90 bp GCTGAGGTGACTGACGAGGAGATCTCCCCACAGCTAGGTGTAGTGAGCCAGACGATGTCCTGTCGGCCATaGCTGATGGCCAGCATGAGG +
Preference number: 4 (lower is better)
Translates to: AEVTDEEISPQLGVVSQTMSCRP*LMASMR
Trigger: CCTCATGCTGGCCATCAGCCATGGCCGACAGGACAT...CGTCTGGCTCACTACACCTAGCTGTGGGGAGATCTCCTCGTCAGTCACCTCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330915.7
CDS-3UTR TCA 90 bp GGCCAGAGTGAGCCCCTTCCTGCCACAGTCACCCCAACTGAAATTGCCTTTCTCAGGTCGGGCAGGTTCTaGTTCAGGGCAAACTTGGCC +
Preference number: 4 (lower is better)
Translates to: GQSEPLPATVTPTEIAFLRSGRF*FRANLA
Trigger: GGCCAAGTTTGCCCTGAATCAGAACCTGCCCGACCT...GAGAAAGGCAATTTCAGTTGGGGTGACTGTGGCAGGAAGGGGCTCACTCTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330915.7
CDS-3UTR TCA 90 bp GTTTCAGAGAGTGGGTGGATCAGGGCTCTATCACTTGGTCCCCACCTCACCTTGGCTGTCTGCCCCGTCTaGCTGGCCTTGGCATTGACA +
Preference number: 4 (lower is better)
Translates to: VSESGWIRALSLGPHLTLAVCPV*LALALT
Trigger: TGTCAATGCCAAGGCCAGTCAGACGGGGCAGACAGC...CAAGGTGAGGTGGGGACCAAGTGATAGAGCCCTGATCCACCCACTCTCTGAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330915.7
CDS-3UTR TCA 90 bp GGCCAGAGTGAGCCCCTTCCTGCCACAGTCACCCCAACTGAAATTGCCTTTCTCGACGAGGCAGCTTACTaGACCTGGGGGTTCTCTCCA +
Preference number: 4 (lower is better)
Translates to: GQSEPLPATVTPTEIAFLDEAAY*TWGFSP
Trigger: TGGAGAGAACCCCCAGGTTCAGTAAGCTGCCTCGTC...GAGAAAGGCAATTTCAGTTGGGGTGACTGTGGCAGGAAGGGGCTCACTCTGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000330915.7
CDS-3UTR GCA 90 bp AGCCCCTTCCTGCCACAGTCACCCCAACTGAAATTGCCTTTCTCTTCGGCCAGTTGGCCAGGGCACTGGTaGCCTCATTGTCCAGGATGG +
Preference number: 4 (lower is better)
Translates to: SPFLPQSPQLKLPFSSASWPGHW*PHCPGW
Trigger: CCATCCTGGACAATGAGGGCACCAGTGCCCTGGCCA...ACTGGCCGAAGAGAAAGGCAATTTCAGTTGGGGTGACTGTGGCAGGAAGGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330915.7
CDS-3UTR CCA 90 bp AAGAAGTTTCAGAGAGTGGGTGGATCAGGGCTCTATCACTTGGTCCCCACCTCACCAGGTGTGGCTGTCTaGGAGCCAGGGGGTGACTCG +
Preference number: 4 (lower is better)
Translates to: KKFQRVGGSGLYHLVPTSPGVAV*EPGGDS
Trigger: CGAGTCACCCCCTGGCTCCCAGACAGCCACACCTGG...TGAGGTGGGGACCAAGTGATAGAGCCCTGATCCACCCACTCTCTGAAACTTCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330915.7
CDS-3UTR CCA 90 bp GCTGAGGTGACTGACGAGGAGATCTCCCCACAGCTAGGTGTAGTGAGCCAGACGCAGGGCTCTATCACTTaGTCCCCACCTCACCTTGGT +
Preference number: 4 (lower is better)
Translates to: AEVTDEEISPQLGVVSQTQGSIT*SPPHLG
Trigger: ACCAAGGTGAGGTGGGGACCAAGTGATAGAGCCCTG...CGTCTGGCTCACTACACCTAGCTGTGGGGAGATCTCCTCGTCAGTCACCTCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330915.7
CDS-3UTR CCA 90 bp GGGGACCCTGGACCCTTCTGTGCGCCAAAGGCTGAGGTGACTGACGAGGAGATCGTTTCAGAGAGTGGGTaGATCAGGGCTCTATCACTT +
Preference number: 4 (lower is better)
Translates to: GDPGPFCAPKAEVTDEEIVSESG*IRALSL
Trigger: AAGTGATAGAGCCCTGATCCACCCACTCTCTGAAAC...GATCTCCTCGTCAGTCACCTCAGCCTTTGGCGCACAGAAGGGTCCAGGGTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330915.7
3UTR CAA 72 bp AAGTTTCAGAGAGTGGGTGGATCAGGGCTCTATCACTaGGTCCCCACCTCACCTTGGTGGGGCCAGAGTGAG +
Preference number: 4 (lower is better)
Translates to: KFQRVGGSGLYH*VPTSPWWGQSE
Trigger: CTCACTCTGGCCCCACCAAGGTGAGGTGGGGACCAAGTGATAGAGCCCTGATCCACCCACTCTCTGAAACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330915.7
CDS-3UTR TCA 90 bp GCTGAGGTGACTGACGAGGAGATCTCCCCACAGCTAGGTGTAGTGAGCCAGACGCACAGTCACCCCAACTaGAATTGCCTTTCTCTTCGG +
Preference number: 4 (lower is better)
Translates to: AEVTDEEISPQLGVVSQTHSHPN*NCLSLR
Trigger: CCGAAGAGAAAGGCAATTTCAGTTGGGGTGACTGTG...CGTCTGGCTCACTACACCTAGCTGTGGGGAGATCTCCTCGTCAGTCACCTCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330915.7
CDS-3UTR CCA 90 bp TGCCTTTCTCTTCGGCCAGTGTTAGCCTCTGAGCAGGGGACCCTGGACCCTTCTAGAAGTTTCAGAGAGTaGGTGGATCAGGGCTCTATC +
Preference number: 4 (lower is better)
Translates to: CLSLRPVLASEQGTLDPSRSFRE*VDQGSI
Trigger: GATAGAGCCCTGATCCACCCACTCTCTGAAACTTCT...AGAAGGGTCCAGGGTCCCCTGCTCAGAGGCTAACACTGGCCGAAGAGAAAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330915.7
CDS-3UTR TCA 90 bp TTATTAGCAAAGAAGTTTCAGAGAGTGGGTGGATCAGGGCTCTATCACTTGGTCCTCGGTTCTGGCGGTTaGCCTCGCAGGCCCCCGTAT +
Preference number: 4 (lower is better)
Translates to: LLAKKFQRVGGSGLYHLVLGSGG*PRRPPY
Trigger: ATACGGGGGCCTGCGAGGTCAACCGCCAGAACCGAG...GACCAAGTGATAGAGCCCTGATCCACCCACTCTCTGAAACTTCTTTGCTAATAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330915.7
CDS-3UTR GCA 90 bp CCCTTCCTGCCACAGTCACCCCAACTGAAATTGCCTTTCTCTTCGGCCAGTGTTATGTCCTCCTCTTCCTaGCTCACAGAGGTGAGTGCA +
Preference number: 4 (lower is better)
Translates to: PFLPQSPQLKLPFSSASVMSSSS*LTEVSA
Trigger: TGCACTCACCTCTGTGAGGCAGGAAGAGGAGGACAT...AACACTGGCCGAAGAGAAAGGCAATTTCAGTTGGGGTGACTGTGGCAGGAAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330915.7
CDS-3UTR TCA 90 bp ATTGAATACTCTGCTGAAGTGTGGTTTTTACTAAGCACACATTGCTTTTATGCTGCCACGGGCTCCGCCTaGGAGCGCCGCTGGCTGGAC +
Preference number: 4 (lower is better)
Translates to: IEYSAEVWFLLSTHCFYAATGSA*ERRWLD
Trigger: GTCCAGCCAGCGGCGCTCTCAGGCGGAGCCCGTGGC...AGCATAAAAGCAATGTGTGCTTAGTAAAAACCACACTTCAGCAGAGTATTCAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593649.5
CDS-3UTR GCA 90 bp ATTGAATACTCTGCTGAAGTGTGGTTTTTACTAAGCACACATTGCTTTTATGCTCGCGGCGACAGCGGCTaGATCAGGAGCCCCGAGGGC +
Preference number: 4 (lower is better)
Translates to: IEYSAEVWFLLSTHCFYARGDSG*IRSPEG
Trigger: GCCCTCGGGGCTCCTGATGCAGCCGCTGTCGCCGCG...AGCATAAAAGCAATGTGTGCTTAGTAAAAACCACACTTCAGCAGAGTATTCAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000593649.5
CDS-3UTR GCA 90 bp ATTGAATACTCTGCTGAAGTGTGGTTTTTACTAAGCACACATTGCTTTTATGCTGCGCGCTCGTGTGTCTaGGCCAGCTCCAGCCGCCGG +
Preference number: 4 (lower is better)
Translates to: IEYSAEVWFLLSTHCFYAARSCV*ASSSRR
Trigger: CCGGCGGCTGGAGCTGGCGCAGACACACGAGCGCGC...AGCATAAAAGCAATGTGTGCTTAGTAAAAACCACACTTCAGCAGAGTATTCAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593649.5
CDS-3UTR GCA 90 bp ATTGAATACTCTGCTGAAGTGTGGTTTTTACTAAGCACACATTGCTTTTATGCTCGCAGCGCGCGCACCTaGTCCTGCAGCTCGGGCAGC +
Preference number: 4 (lower is better)
Translates to: IEYSAEVWFLLSTHCFYARSART*SCSSGS
Trigger: GCTGCCCGAGCTGCAGGAGCAGGTGCGCGCGCTGCG...AGCATAAAAGCAATGTGTGCTTAGTAAAAACCACACTTCAGCAGAGTATTCAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593649.5
CDS-3UTR GCA 90 bp ATTGAATACTCTGCTGAAGTGTGGTTTTTACTAAGCACACATTGCTTTTATGCTGCCCTCGCTGCGCCCTaGAGCCAGGCCGTCTGGGCT +
Preference number: 4 (lower is better)
Translates to: IEYSAEVWFLLSTHCFYAALAAP*SQAVWA
Trigger: AGCCCAGACGGCCTGGCTGCAGGGCGCAGCGAGGGC...AGCATAAAAGCAATGTGTGCTTAGTAAAAACCACACTTCAGCAGAGTATTCAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593649.5
CDS-3UTR GCA 90 bp ATTGAATACTCTGCTGAAGTGTGGTTTTTACTAAGCACACATTGCTTTTATGCTTGGGAGGGCCAGGGGTaGCCGAGTCGGATCCCCCGC +
Preference number: 4 (lower is better)
Translates to: IEYSAEVWFLLSTHCFYAWEGQG*PSRIPR
Trigger: GCGGGGGATCCGACTCGGGCACCCCTGGCCCTCCCA...AGCATAAAAGCAATGTGTGCTTAGTAAAAACCACACTTCAGCAGAGTATTCAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000593649.5
CDS-3UTR GCA 90 bp ATTGAATACTCTGCTGAAGTGTGGTTTTTACTAAGCACACATTGCTTTTATGCTCGGGGCCGGCTCAGCTaGCGCTGCAGCGCTACGCAC +
Preference number: 4 (lower is better)
Translates to: IEYSAEVWFLLSTHCFYARGRLS*RCSATH
Trigger: GTGCGTAGCGCTGCAGCGGCAGCTGAGCCGGCCCCG...AGCATAAAAGCAATGTGTGCTTAGTAAAAACCACACTTCAGCAGAGTATTCAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000593649.5
CDS-3UTR GCA 90 bp TTATTAGCAAAGAAGTTTCAGAGAGTGGGTGGATCAGGGCTCTATCACTTGGTCGCCCCATCCGCATCCTaGGCATTCACATCAGCCCCA +
Preference number: 4 (lower is better)
Translates to: LLAKKFQRVGGSGLYHLVAPSAS*AFTSAP
Trigger: TGGGGCTGATGTGAATGCGCAGGATGCGGATGGGGC...GACCAAGTGATAGAGCCCTGATCCACCCACTCTCTGAAACTTCTTTGCTAATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330915.7
CDS-3UTR CCA 90 bp ATTGAATACTCTGCTGAAGTGTGGTTTTTACTAAGCACACATTGCTTTTATGCTGTGAGCCGCCGCAGCTaGGCGAGCTTGTCCGGGCGC +
Preference number: 4 (lower is better)
Translates to: IEYSAEVWFLLSTHCFYAVSRRS*ASLSGR
Trigger: GCGCCCGGACAAGCTCGCCCAGCTGCGGCGGCTCAC...AGCATAAAAGCAATGTGTGCTTAGTAAAAACCACACTTCAGCAGAGTATTCAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593649.5
CDS-3UTR CCA 90 bp ATTGAATACTCTGCTGAAGTGTGGTTTTTACTAAGCACACATTGCTTTTATGCTTCCCCGTCGAGGACCTaGAGCGCGCCCTCGCTGCGC +
Preference number: 4 (lower is better)
Translates to: IEYSAEVWFLLSTHCFYASPSRT*SAPSLR
Trigger: GCGCAGCGAGGGCGCGCTCCAGGTCCTCGACGGGGA...AGCATAAAAGCAATGTGTGCTTAGTAAAAACCACACTTCAGCAGAGTATTCAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000593649.5
CDS-3UTR TCA 90 bp ATTGAATACTCTGCTGAAGTGTGGTTTTTACTAAGCACACATTGCTTTTATGCTCTGTCAGAGGCACCCTaGAGCCGCAGCCCCAGCCGC +
Preference number: 4 (lower is better)
Translates to: IEYSAEVWFLLSTHCFYALSEAP*SRSPSR
Trigger: GCGGCTGGGGCTGCGGCTTCAGGGTGCCTCTGACAG...AGCATAAAAGCAATGTGTGCTTAGTAAAAACCACACTTCAGCAGAGTATTCAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000593649.5
CDS-3UTR TCA 90 bp TTTATTAGCAAAGAAGTTTCAGAGAGTGGGTGGATCAGGGCTCTATCACTTGGTCGCCAAAGGCTGAGGTaGCTGACGAGGAGATCTCCC +
Preference number: 4 (lower is better)
Translates to: FISKEVSESGWIRALSLGRQRLR*LTRRSP
Trigger: GGGAGATCTCCTCGTCAGTCACCTCAGCCTTTGGCG...ACCAAGTGATAGAGCCCTGATCCACCCACTCTCTGAAACTTCTTTGCTAATAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330915.7
CDS-3UTR GCA 90 bp ATTGAATACTCTGCTGAAGTGTGGTTTTTACTAAGCACACATTGCTTTTATGCTGTCTCCCGGAGCGTGTaGTCGACGCGCGGGTTGCGC +
Preference number: 4 (lower is better)
Translates to: IEYSAEVWFLLSTHCFYAVSRSV*STRGLR
Trigger: GCGCAACCCGCGCGTCGAGCACACGCTCCGGGAGAC...AGCATAAAAGCAATGTGTGCTTAGTAAAAACCACACTTCAGCAGAGTATTCAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593649.5
CDS-3UTR GCA 90 bp ATTGAATACTCTGCTGAAGTGTGGTTTTTACTAAGCACACATTGCTTTTATGCTGCGCGCACCTGCTCCTaGAGCTCGGGCAGCGTTCGC +
Preference number: 4 (lower is better)
Translates to: IEYSAEVWFLLSTHCFYAARTCS*SSGSVR
Trigger: GCGAACGCTGCCCGAGCTGCAGGAGCAGGTGCGCGC...AGCATAAAAGCAATGTGTGCTTAGTAAAAACCACACTTCAGCAGAGTATTCAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593649.5
CDS-3UTR GCA 90 bp ATTGAATACTCTGCTGAAGTGTGGTTTTTACTAAGCACACATTGCTTTTATGCTCAAGGAGGGCGCCTCTaGCGGGGACTCGGTCTGCGC +
Preference number: 4 (lower is better)
Translates to: IEYSAEVWFLLSTHCFYAQGGRL*RGLGLR
Trigger: GCGCAGACCGAGTCCCCGGCAGAGGCGCCCTCCTTG...AGCATAAAAGCAATGTGTGCTTAGTAAAAACCACACTTCAGCAGAGTATTCAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000593649.5
CDS-3UTR GCA 90 bp ATTGAATACTCTGCTGAAGTGTGGTTTTTACTAAGCACACATTGCTTTTATGCTCGGCTCAGCTGCCGCTaGAGCGCTACGCACGCCTCC +
Preference number: 4 (lower is better)
Translates to: IEYSAEVWFLLSTHCFYARLSCR*SATHAS
Trigger: GGAGGCGTGCGTAGCGCTGCAGCGGCAGCTGAGCCG...AGCATAAAAGCAATGTGTGCTTAGTAAAAACCACACTTCAGCAGAGTATTCAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593649.5
CDS-3UTR CCA 90 bp ATTGAATACTCTGCTGAAGTGTGGTTTTTACTAAGCACACATTGCTTTTATGCTGGATGTCCAGGCGCCTaGGCTACGTGCGCCCGCGAG +
Preference number: 4 (lower is better)
Translates to: IEYSAEVWFLLSTHCFYAGCPGA*ATCARE
Trigger: CTCGCGGGCGCACGTAGCCCAGGCGCCTGGACATCC...AGCATAAAAGCAATGTGTGCTTAGTAAAAACCACACTTCAGCAGAGTATTCAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593649.5
CDS-3UTR CCA 90 bp ATTGAATACTCTGCTGAAGTGTGGTTTTTACTAAGCACACATTGCTTTTATGCTCCCGAGGGCGCGCCCTaGGAGAGTATGCCCGGTGCT +
Preference number: 4 (lower is better)
Translates to: IEYSAEVWFLLSTHCFYAPEGAP*ESMPGA
Trigger: AGCACCGGGCATACTCTCCCAGGGCGCGCCCTCGGG...AGCATAAAAGCAATGTGTGCTTAGTAAAAACCACACTTCAGCAGAGTATTCAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593649.5
CDS-3UTR CCA 90 bp ATTGAATACTCTGCTGAAGTGTGGTTTTTACTAAGCACACATTGCTTTTATGCTGGCAGCGTTCGCGCCTaGTCCTCGAGCTCGCGCAGG +
Preference number: 4 (lower is better)
Translates to: IEYSAEVWFLLSTHCFYAGSVRA*SSSSRR
Trigger: CCTGCGCGAGCTCGAGGACCAGGCGCGAACGCTGCC...AGCATAAAAGCAATGTGTGCTTAGTAAAAACCACACTTCAGCAGAGTATTCAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593649.5
CDS-3UTR CCA 90 bp ATTGAATACTCTGCTGAAGTGTGGTTTTTACTAAGCACACATTGCTTTTATGCTTGCAGCCAGGCCGTCTaGGCTGTCAGCCCGGGGGCT +
Preference number: 4 (lower is better)
Translates to: IEYSAEVWFLLSTHCFYACSQAV*AVSPGA
Trigger: AGCCCCCGGGCTGACAGCCCAGACGGCCTGGCTGCA...AGCATAAAAGCAATGTGTGCTTAGTAAAAACCACACTTCAGCAGAGTATTCAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000593649.5
CDS-3UTR CCA 90 bp ATTGAATACTCTGCTGAAGTGTGGTTTTTACTAAGCACACATTGCTTTTATGCTGTCTCCGGCACGGCCTaGGCACCCGCTTCTCGGGTC +
Preference number: 4 (lower is better)
Translates to: IEYSAEVWFLLSTHCFYAVSGTA*APASRV
Trigger: GACCCGAGAAGCGGGTGCCCAGGCCGTGCCGGAGAC...AGCATAAAAGCAATGTGTGCTTAGTAAAAACCACACTTCAGCAGAGTATTCAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593649.5
CDS-3UTR CCA 90 bp ATTGAATACTCTGCTGAAGTGTGGTTTTTACTAAGCACACATTGCTTTTATGCTACGGGGTCTGGGTGGTaGCCTCGCGTAGCTGGGCCC +
Preference number: 4 (lower is better)
Translates to: IEYSAEVWFLLSTHCFYATGSGW*PRVAGP
Trigger: GGGCCCAGCTACGCGAGGCCACCACCCAGACCCCGT...AGCATAAAAGCAATGTGTGCTTAGTAAAAACCACACTTCAGCAGAGTATTCAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000593649.5
CDS-3UTR CCA 90 bp GTTTTATTAGCAAAGAAGTTTCAGAGAGTGGGTGGATCAGGGCTCTATCACTTGGGCGCCCATACTCACTaGCACACATCAGCGCTGTGG +
Preference number: 4 (lower is better)
Translates to: VLLAKKFQRVGGSGLYHLGAHTH*HTSALW
Trigger: CCACAGCGCTGATGTGTGCCAGTGAGTATGGGCGCC...CAAGTGATAGAGCCCTGATCCACCCACTCTCTGAAACTTCTTTGCTAATAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330915.7
CDS-3UTR CCA 90 bp ATTGAATACTCTGCTGAAGTGTGGTTTTTACTAAGCACACATTGCTTTTATGCTGCCTGGGTGTCGGGCTaGCCCGAGCTCAGGTGGGCA +
Preference number: 4 (lower is better)
Translates to: IEYSAEVWFLLSTHCFYAAWVSG*PELRWA
Trigger: TGCCCACCTGAGCTCGGGCCAGCCCGACACCCAGGC...AGCATAAAAGCAATGTGTGCTTAGTAAAAACCACACTTCAGCAGAGTATTCAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593649.5
CDS-3UTR CCA 90 bp ATTGAATACTCTGCTGAAGTGTGGTTTTTACTAAGCACACATTGCTTTTATGCTCGCTGCACTCCAGCCTaGGTGTCGGGCTGGCCCGAG +
Preference number: 4 (lower is better)
Translates to: IEYSAEVWFLLSTHCFYARCTPA*VSGWPE
Trigger: CTCGGGCCAGCCCGACACCCAGGCTGGAGTGCAGCG...AGCATAAAAGCAATGTGTGCTTAGTAAAAACCACACTTCAGCAGAGTATTCAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593649.5
CDS-3UTR TCA 90 bp ATTGAATACTCTGCTGAAGTGTGGTTTTTACTAAGCACACATTGCTTTTATGCTCCGGGCGAGCTCTCCTaGGTCAAGGAGGGCGCCTCT +
Preference number: 4 (lower is better)
Translates to: IEYSAEVWFLLSTHCFYAPGELS*VKEGAS
Trigger: AGAGGCGCCCTCCTTGACTCAGGAGAGCTCGCCCGG...AGCATAAAAGCAATGTGTGCTTAGTAAAAACCACACTTCAGCAGAGTATTCAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593649.5
CDS-3UTR GCA 90 bp ATTGAATACTCTGCTGAAGTGTGGTTTTTACTAAGCACACATTGCTTTTATGCTAGCGCCGCGGCCATCTaGTCGCGCACCAGCTGCAGT +
Preference number: 4 (lower is better)
Translates to: IEYSAEVWFLLSTHCFYASAAAI*SRTSCS
Trigger: ACTGCAGCTGGTGCGCGAGCAGATGGCCGCGGCGCT...AGCATAAAAGCAATGTGTGCTTAGTAAAAACCACACTTCAGCAGAGTATTCAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593649.5
CDS-3UTR GCA 90 bp ATTGAATACTCTGCTGAAGTGTGGTTTTTACTAAGCACACATTGCTTTTATGCTGCCGGGGACTCGGTCTaGGCGGCCTTTTCGGCACAG +
Preference number: 4 (lower is better)
Translates to: IEYSAEVWFLLSTHCFYAAGDSV*AAFSAQ
Trigger: CTGTGCCGAAAAGGCCGCGCAGACCGAGTCCCCGGC...AGCATAAAAGCAATGTGTGCTTAGTAAAAACCACACTTCAGCAGAGTATTCAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000593649.5
CDS-3UTR CCA 90 bp ATTGAATACTCTGCTGAAGTGTGGTTTTTACTAAGCACACATTGCTTTTATGCTTGGCCAGGGACTCGCTaGATGTCCAGGCGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: IEYSAEVWFLLSTHCFYAWPGTR*MSRRLG
Trigger: GCCCAGGCGCCTGGACATCCAGCGAGTCCCTGGCCA...AGCATAAAAGCAATGTGTGCTTAGTAAAAACCACACTTCAGCAGAGTATTCAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593649.5
CDS-3UTR CCA 90 bp ATTGAATACTCTGCTGAAGTGTGGTTTTTACTAAGCACACATTGCTTTTATGCTCGCACCAGCTGCAGTTaGGCAGGGCCGGGCGAAGCA +
Preference number: 4 (lower is better)
Translates to: IEYSAEVWFLLSTHCFYARTSCS*AGPGEA
Trigger: TGCTTCGCCCGGCCCTGCCCAACTGCAGCTGGTGCG...AGCATAAAAGCAATGTGTGCTTAGTAAAAACCACACTTCAGCAGAGTATTCAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593649.5
CDS-3UTR CCA 90 bp ATTGAATACTCTGCTGAAGTGTGGTTTTTACTAAGCACACATTGCTTTTATGCTGCCACCTCCCGGGTCTaGGGCGTCCCATCGAGACTC +
Preference number: 4 (lower is better)
Translates to: IEYSAEVWFLLSTHCFYAATSRV*GVPSRL
Trigger: GAGTCTCGATGGGACGCCCCAGACCCGGGAGGTGGC...AGCATAAAAGCAATGTGTGCTTAGTAAAAACCACACTTCAGCAGAGTATTCAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593649.5
CDS-3UTR CCA 90 bp ATTGAATACTCTGCTGAAGTGTGGTTTTTACTAAGCACACATTGCTTTTATGCTTCCACGGGGTCTGGGTaGTGGCCTCGCGTAGCTGGG +
Preference number: 4 (lower is better)
Translates to: IEYSAEVWFLLSTHCFYASTGSG*WPRVAG
Trigger: CCCAGCTACGCGAGGCCACCACCCAGACCCCGTGGA...AGCATAAAAGCAATGTGTGCTTAGTAAAAACCACACTTCAGCAGAGTATTCAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000593649.5
CDS-3UTR CCA 90 bp ATTGAATACTCTGCTGAAGTGTGGTTTTTACTAAGCACACATTGCTTTTATGCTCAGCTCCACGGGGTCTaGGTGGTGGCCTCGCGTAGC +
Preference number: 4 (lower is better)
Translates to: IEYSAEVWFLLSTHCFYAQLHGV*VVASRS
Trigger: GCTACGCGAGGCCACCACCCAGACCCCGTGGAGCTG...AGCATAAAAGCAATGTGTGCTTAGTAAAAACCACACTTCAGCAGAGTATTCAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000593649.5
CDS-3UTR CCA 90 bp ATTGAATACTCTGCTGAAGTGTGGTTTTTACTAAGCACACATTGCTTTTATGCTCCCCTTCCAGCATCCTaGCCACGGGCTCCGCCTGAG +
Preference number: 4 (lower is better)
Translates to: IEYSAEVWFLLSTHCFYAPLPAS*PRAPPE
Trigger: CTCAGGCGGAGCCCGTGGCCAGGATGCTGGAAGGGG...AGCATAAAAGCAATGTGTGCTTAGTAAAAACCACACTTCAGCAGAGTATTCAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000593649.5
CDS-3UTR CCA 90 bp ATTGAATACTCTGCTGAAGTGTGGTTTTTACTAAGCACACATTGCTTTTATGCTCAGCCTCCAGGGCGATaGCCAGGGCACTGGTGCCCT +
Preference number: 4 (lower is better)
Translates to: IEYSAEVWFLLSTHCFYAQPPGR*PGHWCP
Trigger: AGGGCACCAGTGCCCTGGCCATCGCCCTGGAGGCTG...AGCATAAAAGCAATGTGTGCTTAGTAAAAACCACACTTCAGCAGAGTATTCAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593649.5
CDS-3UTR TCA 90 bp ATTGAATACTCTGCTGAAGTGTGGTTTTTACTAAGCACACATTGCTTTTATGCTCTCGGTTCTGGCGGTTaGCCTCGCAGGCCCCCGTAT +
Preference number: 4 (lower is better)
Translates to: IEYSAEVWFLLSTHCFYALGSGG*PRRPPY
Trigger: ATACGGGGGCCTGCGAGGTCAACCGCCAGAACCGAG...AGCATAAAAGCAATGTGTGCTTAGTAAAAACCACACTTCAGCAGAGTATTCAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000593649.5
CDS-3UTR GCA 90 bp ATTGAATACTCTGCTGAAGTGTGGTTTTTACTAAGCACACATTGCTTTTATGCTCTCGCACCTCCCCTGTaGCACCTGCTGAGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: IEYSAEVWFLLSTHCFYALAPPL*HLLRLC
Trigger: GCAGAGCCTCAGCAGGTGGCACAGGGGAGGTGCGAG...AGCATAAAAGCAATGTGTGCTTAGTAAAAACCACACTTCAGCAGAGTATTCAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000593649.5
CDS-3UTR GCA 90 bp ATTGAATACTCTGCTGAAGTGTGGTTTTTACTAAGCACACATTGCTTTTATGCTGCCAGGTTCACCACGTaGGCCAGCAGTTCGGGTCCC +
Preference number: 4 (lower is better)
Translates to: IEYSAEVWFLLSTHCFYAARFTT*ASSSGP
Trigger: GGGACCCGAACTGCTGGCGCACGTGGTGAACCTGGC...AGCATAAAAGCAATGTGTGCTTAGTAAAAACCACACTTCAGCAGAGTATTCAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593649.5
CDS-3UTR GCA 90 bp ATTGAATACTCTGCTGAAGTGTGGTTTTTACTAAGCACACATTGCTTTTATGCTGCGGCCACCTCATCCTaGTCAGCCTCCAGGGCGATG +
Preference number: 4 (lower is better)
Translates to: IEYSAEVWFLLSTHCFYAAATSS*SASRAM
Trigger: CATCGCCCTGGAGGCTGAGCAGGATGAGGTGGCCGC...AGCATAAAAGCAATGTGTGCTTAGTAAAAACCACACTTCAGCAGAGTATTCAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593649.5
CDS-3UTR CCA 90 bp ATTGAATACTCTGCTGAAGTGTGGTTTTTACTAAGCACACATTGCTTTTATGCTGGTCCGGAGCTGGGTTaGGCACCAGGTGTGCCGTCT +
Preference number: 4 (lower is better)
Translates to: IEYSAEVWFLLSTHCFYAGPELG*APGVPS
Trigger: AGACGGCACACCTGGTGCCCAACCCAGCTCCGGACC...AGCATAAAAGCAATGTGTGCTTAGTAAAAACCACACTTCAGCAGAGTATTCAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593649.5
CDS-3UTR CCA 90 bp ATTGAATACTCTGCTGAAGTGTGGTTTTTACTAAGCACACATTGCTTTTATGCTTGGCCCGAGCTCAGGTaGGCATGTAGCAGAGCGGCC +
Preference number: 4 (lower is better)
Translates to: IEYSAEVWFLLSTHCFYAWPELR*ACSRAA
Trigger: GGCCGCTCTGCTACATGCCCACCTGAGCTCGGGCCA...AGCATAAAAGCAATGTGTGCTTAGTAAAAACCACACTTCAGCAGAGTATTCAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593649.5
CDS-3UTR GCA 90 bp ATTGAATACTCTGCTGAAGTGTGGTTTTTACTAAGCACACATTGCTTTTATGCTGGAGAGTATGCCCGGTaGTCCACCGTCGTCACTGGC +
Preference number: 4 (lower is better)
Translates to: IEYSAEVWFLLSTHCFYAGEYAR*STVVTG
Trigger: GCCAGTGACGACGGTGGAGCACCGGGCATACTCTCC...AGCATAAAAGCAATGTGTGCTTAGTAAAAACCACACTTCAGCAGAGTATTCAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593649.5
CDS-3UTR CCA 90 bp ATTGAATACTCTGCTGAAGTGTGGTTTTTACTAAGCACACATTGCTTTTATGCTCCCTGTCTCCGTCCATaGATCCGGGCGAGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: IEYSAEVWFLLSTHCFYAPCLRP*IRASSP
Trigger: AGGAGAGCTCGCCCGGATCCATGGACGGAGACAGGG...AGCATAAAAGCAATGTGTGCTTAGTAAAAACCACACTTCAGCAGAGTATTCAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593649.5
CDS-3UTR CCA 90 bp ATTGAATACTCTGCTGAAGTGTGGTTTTTACTAAGCACACATTGCTTTTATGCTTCTTGGGTCCGGAGCTaGGTTGGGCACCAGGTGTGC +
Preference number: 4 (lower is better)
Translates to: IEYSAEVWFLLSTHCFYASWVRS*VGHQVC
Trigger: GCACACCTGGTGCCCAACCCAGCTCCGGACCCAAGA...AGCATAAAAGCAATGTGTGCTTAGTAAAAACCACACTTCAGCAGAGTATTCAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593649.5
CDS-3UTR CCA 90 bp ATTGAATACTCTGCTGAAGTGTGGTTTTTACTAAGCACACATTGCTTTTATGCTACTCGAAACCACTCCTaGGCCACGAGGCGCACTGCG +
Preference number: 4 (lower is better)
Translates to: IEYSAEVWFLLSTHCFYATRNHS*ATRRTA
Trigger: CGCAGTGCGCCTCGTGGCCCAGGAGTGGTTTCGAGT...AGCATAAAAGCAATGTGTGCTTAGTAAAAACCACACTTCAGCAGAGTATTCAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593649.5
CDS-3UTR CCA 90 bp ATTGAATACTCTGCTGAAGTGTGGTTTTTACTAAGCACACATTGCTTTTATGCTGGAGCAGGCTTGCGATaGCCAGGTTCCCGTGGGACA +
Preference number: 4 (lower is better)
Translates to: IEYSAEVWFLLSTHCFYAGAGLR*PGSRGT
Trigger: TGTCCCACGGGAACCTGGCCATCGCAAGCCTGCTCC...AGCATAAAAGCAATGTGTGCTTAGTAAAAACCACACTTCAGCAGAGTATTCAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593649.5
CDS-3UTR CCA 90 bp ATTGAATACTCTGCTGAAGTGTGGTTTTTACTAAGCACACATTGCTTTTATGCTCACACATCAGCGCTGTaGCCCCATCCGCATCCTGCG +
Preference number: 4 (lower is better)
Translates to: IEYSAEVWFLLSTHCFYAHTSAL*PHPHPA
Trigger: CGCAGGATGCGGATGGGGCCACAGCGCTGATGTGTG...AGCATAAAAGCAATGTGTGCTTAGTAAAAACCACACTTCAGCAGAGTATTCAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000593649.5
CDS-3UTR TCA 90 bp ATTGAATACTCTGCTGAAGTGTGGTTTTTACTAAGCACACATTGCTTTTATGCTGCTGTCTGCCCCGTCTaGCTGGCCTTGGCATTGACA +
Preference number: 4 (lower is better)
Translates to: IEYSAEVWFLLSTHCFYAAVCPV*LALALT
Trigger: TGTCAATGCCAAGGCCAGTCAGACGGGGCAGACAGC...AGCATAAAAGCAATGTGTGCTTAGTAAAAACCACACTTCAGCAGAGTATTCAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000593649.5
CDS-3UTR GCA 90 bp ATTGAATACTCTGCTGAAGTGTGGTTTTTACTAAGCACACATTGCTTTTATGCTATCCAGGAGCAGGCTTaGGATGGCCAGGTTCCCGTG +
Preference number: 4 (lower is better)
Translates to: IEYSAEVWFLLSTHCFYAIQEQA*DGQVPV
Trigger: CACGGGAACCTGGCCATCGCAAGCCTGCTCCTGGAT...AGCATAAAAGCAATGTGTGCTTAGTAAAAACCACACTTCAGCAGAGTATTCAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593649.5
CDS-3UTR GCA 90 bp ATTGAATACTCTGCTGAAGTGTGGTTTTTACTAAGCACACATTGCTTTTATGCTCCTCACAGAGGTGAGTaGAGCCAGCATGAGGGCCGA +
Preference number: 4 (lower is better)
Translates to: IEYSAEVWFLLSTHCFYAPHRGE*SQHEGR
Trigger: TCGGCCCTCATGCTGGCTGCACTCACCTCTGTGAGG...AGCATAAAAGCAATGTGTGCTTAGTAAAAACCACACTTCAGCAGAGTATTCAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593649.5
CDS-3UTR GCA 90 bp ATTGAATACTCTGCTGAAGTGTGGTTTTTACTAAGCACACATTGCTTTTATGCTGCCCCATCCGCATCCTaGGCATTCACATCAGCCCCA +
Preference number: 4 (lower is better)
Translates to: IEYSAEVWFLLSTHCFYAAPSAS*AFTSAP
Trigger: TGGGGCTGATGTGAATGCGCAGGATGCGGATGGGGC...AGCATAAAAGCAATGTGTGCTTAGTAAAAACCACACTTCAGCAGAGTATTCAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000593649.5
CDS-3UTR GCA 90 bp ATTGAATACTCTGCTGAAGTGTGGTTTTTACTAAGCACACATTGCTTTTATGCTTGGCCAGGGCACTGGTaGCCTCATTGTCCAGGATGG +
Preference number: 4 (lower is better)
Translates to: IEYSAEVWFLLSTHCFYAWPGHW*PHCPGW
Trigger: CCATCCTGGACAATGAGGGCACCAGTGCCCTGGCCA...AGCATAAAAGCAATGTGTGCTTAGTAAAAACCACACTTCAGCAGAGTATTCAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593649.5
CDS-3UTR CCA 90 bp ATTGAATACTCTGCTGAAGTGTGGTTTTTACTAAGCACACATTGCTTTTATGCTCAAACTGCAGGCTCTTaGGTCCGGAGCTGGGTTGGG +
Preference number: 4 (lower is better)
Translates to: IEYSAEVWFLLSTHCFYAQTAGS*VRSWVG
Trigger: CCCAACCCAGCTCCGGACCCAAGAGCCTGCAGTTTG...AGCATAAAAGCAATGTGTGCTTAGTAAAAACCACACTTCAGCAGAGTATTCAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593649.5
CDS-3UTR CCA 90 bp ATTGAATACTCTGCTGAAGTGTGGTTTTTACTAAGCACACATTGCTTTTATGCTGAGAGCGCCGCTGGCTaGACACTCGAAACCACTCCT +
Preference number: 4 (lower is better)
Translates to: IEYSAEVWFLLSTHCFYAESAAG*TLETTP
Trigger: AGGAGTGGTTTCGAGTGTCCAGCCAGCGGCGCTCTC...AGCATAAAAGCAATGTGTGCTTAGTAAAAACCACACTTCAGCAGAGTATTCAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593649.5
CDS-3UTR CCA 90 bp ATTGAATACTCTGCTGAAGTGTGGTTTTTACTAAGCACACATTGCTTTTATGCTGGCGCCCATACTCACTaGCACACATCAGCGCTGTGG +
Preference number: 4 (lower is better)
Translates to: IEYSAEVWFLLSTHCFYAGAHTH*HTSALW
Trigger: CCACAGCGCTGATGTGTGCCAGTGAGTATGGGCGCC...AGCATAAAAGCAATGTGTGCTTAGTAAAAACCACACTTCAGCAGAGTATTCAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593649.5
CDS-3UTR CCA 90 bp ATTGAATACTCTGCTGAAGTGTGGTTTTTACTAAGCACACATTGCTTTTATGCTCGATGGCCAGGGCACTaGTGCCCTCATTGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: IEYSAEVWFLLSTHCFYARWPGH*CPHCPG
Trigger: TCCTGGACAATGAGGGCACCAGTGCCCTGGCCATCG...AGCATAAAAGCAATGTGTGCTTAGTAAAAACCACACTTCAGCAGAGTATTCAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593649.5
CDS-3UTR TCA 90 bp ATTGAATACTCTGCTGAAGTGTGGTTTTTACTAAGCACACATTGCTTTTATGCTAGGTCGGGCAGGTTCTaGTTCAGGGCAAACTTGGCC +
Preference number: 4 (lower is better)
Translates to: IEYSAEVWFLLSTHCFYARSGRF*FRANLA
Trigger: GGCCAAGTTTGCCCTGAATCAGAACCTGCCCGACCT...AGCATAAAAGCAATGTGTGCTTAGTAAAAACCACACTTCAGCAGAGTATTCAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593649.5
CDS-3UTR GCA 90 bp ATTGAATACTCTGCTGAAGTGTGGTTTTTACTAAGCACACATTGCTTTTATGCTAGGACCCCAACAAACTaGAGGCTCTTGGGTCCGGAG +
Preference number: 4 (lower is better)
Translates to: IEYSAEVWFLLSTHCFYARTPTN*RLLGPE
Trigger: CTCCGGACCCAAGAGCCTGCAGTTTGTTGGGGTCCT...AGCATAAAAGCAATGTGTGCTTAGTAAAAACCACACTTCAGCAGAGTATTCAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000593649.5
CDS-3UTR CCA 90 bp ATTGAATACTCTGCTGAAGTGTGGTTTTTACTAAGCACACATTGCTTTTATGCTATGTCCTGTCGGCCATaGCTGATGGCCAGCATGAGG +
Preference number: 4 (lower is better)
Translates to: IEYSAEVWFLLSTHCFYAMSCRP*LMASMR
Trigger: CCTCATGCTGGCCATCAGCCATGGCCGACAGGACAT...AGCATAAAAGCAATGTGTGCTTAGTAAAAACCACACTTCAGCAGAGTATTCAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593649.5
CDS-3UTR CCA 90 bp ATTGAATACTCTGCTGAAGTGTGGTTTTTACTAAGCACACATTGCTTTTATGCTCCTCATTGTCCAGGATaGCAGGGTCACAGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: IEYSAEVWFLLSTHCFYAPHCPG*QGHSLA
Trigger: AGCCAGGCTGTGACCCTGCCATCCTGGACAATGAGG...AGCATAAAAGCAATGTGTGCTTAGTAAAAACCACACTTCAGCAGAGTATTCAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593649.5
CDS-3UTR GCA 90 bp ATTGAATACTCTGCTGAAGTGTGGTTTTTACTAAGCACACATTGCTTTTATGCTCTTGGCCATGTTTCCTaGAGCAGCTGTCAGAGGCAC +
Preference number: 4 (lower is better)
Translates to: IEYSAEVWFLLSTHCFYALGHVS*SSCQRH
Trigger: GTGCCTCTGACAGCTGCTGCAGGAAACATGGCCAAG...AGCATAAAAGCAATGTGTGCTTAGTAAAAACCACACTTCAGCAGAGTATTCAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593649.5
CDS-3UTR TCA 90 bp ATTGAATACTCTGCTGAAGTGTGGTTTTTACTAAGCACACATTGCTTTTATGCTTCTCGTACTCTCCGTTaGGGACCCCAACAAACTGCA +
Preference number: 4 (lower is better)
Translates to: IEYSAEVWFLLSTHCFYASRTLR*GPQQTA
Trigger: TGCAGTTTGTTGGGGTCCTCAACGGAGAGTACGAGA...AGCATAAAAGCAATGTGTGCTTAGTAAAAACCACACTTCAGCAGAGTATTCAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000593649.5
CDS-3UTR TCA 90 bp ATTGAATACTCTGCTGAAGTGTGGTTTTTACTAAGCACACATTGCTTTTATGCTGACTGGCCTTGGCATTaGCATCACCCATGCAGAAGA +
Preference number: 4 (lower is better)
Translates to: IEYSAEVWFLLSTHCFYADWPWH*HHPCRR
Trigger: TCTTCTGCATGGGTGATGTCAATGCCAAGGCCAGTC...AGCATAAAAGCAATGTGTGCTTAGTAAAAACCACACTTCAGCAGAGTATTCAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593649.5
CDS-3UTR TCA 90 bp ATTGAATACTCTGCTGAAGTGTGGTTTTTACTAAGCACACATTGCTTTTATGCTGGCAGGAGAATTTCTTaGACCTGGGAGGTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: IEYSAEVWFLLSTHCFYAGRRIS*TWEVEV
Trigger: AACCTCCACCTCCCAGGTTCAAGAAATTCTCCTGCC...AGCATAAAAGCAATGTGTGCTTAGTAAAAACCACACTTCAGCAGAGTATTCAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593649.5
CDS-3UTR GCA 90 bp ATTGAATACTCTGCTGAAGTGTGGTTTTTACTAAGCACACATTGCTTTTATGCTATGTCCTCCTCTTCCTaGCTCACAGAGGTGAGTGCA +
Preference number: 4 (lower is better)
Translates to: IEYSAEVWFLLSTHCFYAMSSSS*LTEVSA
Trigger: TGCACTCACCTCTGTGAGGCAGGAAGAGGAGGACAT...AGCATAAAAGCAATGTGTGCTTAGTAAAAACCACACTTCAGCAGAGTATTCAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593649.5
CDS GCA 90 bp CCAGCCGCCGGCTGGTCTCCCGGAGCGTGTGCTCGACGCGCGGGTTaGGCACGGGCGCGCGCGGCGACAGCGGCTGCATCAGGAGCCCCG +
Preference number: 5 (lower is better)
Translates to: PAAGWSPGACARRAG*ARARAATAAASGAP
Trigger: CGGGGCTCCTGATGCAGCCGCTGTCGCCGCGCGCGCCCGTGCGCAACCCGCGCGTCGAGCACACGCTCCGGGAGACCAGCCGGCGGCTGG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330915.7
ENST00000593649.5
CDS CCA 90 bp CCGCCGCGCTCGGAGGTGGCCAGGCGCTCGGTGAGCCGCCGCAGCTaGGCGAGCTTGTCCGGGCGCGTCTCAGCCTCCCCGTCCGGCTCG +
Preference number: 5 (lower is better)
Translates to: PPRSEVARRSVSRRS*ASLSGRVSASPSGS
Trigger: CGAGCCGGACGGGGAGGCTGAGACGCGCCCGGACAAGCTCGCCCAGCTGCGGCGGCTCACCGAGCGCCTGGCCACCTCCGAGCGCGGCGG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330915.7
ENST00000593649.5
CDS TCA 90 bp TGGCCCTGGCACGGCCGCCGCGCTCGGAGGTGGCCAGGCGCTCGGTaGGCCGCCGCAGCTGGGCGAGCTTGTCCGGGCGCGTCTCAGCCT +
Preference number: 5 (lower is better)
Translates to: WPWHGRRARRWPGAR*AAAAGRACPGASQP
Trigger: AGGCTGAGACGCGCCCGGACAAGCTCGCCCAGCTGCGGCGGCTCACCGAGCGCCTGGCCACCTCCGAGCGCGGCGGCCGTGCCAGGGCCA
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330915.7
ENST00000593649.5
CDS GCA 90 bp TGTGTCTGCGCCAGCTCCAGCCGCCGGCTGGTCTCCCGGAGCGTGTaGTCGACGCGCGGGTTGCGCACGGGCGCGCGCGGCGACAGCGGC +
Preference number: 5 (lower is better)
Translates to: CVCASSSRRLVSRSV*STRGLRTGARGDSG
Trigger: GCCGCTGTCGCCGCGCGCGCCCGTGCGCAACCCGCGCGTCGAGCACACGCTCCGGGAGACCAGCCGGCGGCTGGAGCTGGCGCAGACACA
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330915.7
ENST00000593649.5
CDS CCA 90 bp GGCTGGGCGCGCGCTCGTGTGTCTGCGCCAGCTCCAGCCGCCGGCTaGTCTCCCGGAGCGTGTGCTCGACGCGCGGGTTGCGCACGGGCG +
Preference number: 5 (lower is better)
Translates to: GWARARVSAPAPAAG*SPGACARRAGCARA
Trigger: CGCCCGTGCGCAACCCGCGCGTCGAGCACACGCTCCGGGAGACCAGCCGGCGGCTGGAGCTGGCGCAGACACACGAGCGCGCGCCCAGCC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330915.7
ENST00000593649.5
CDS CCA 90 bp CGCAGCGCGCGCACCTGCTCCTGCAGCTCGGGCAGCGTTCGCGCCTaGTCCTCGAGCTCGCGCAGGCGCCGCAGCGCCGCGGCCATCTGC +
Preference number: 5 (lower is better)
Translates to: RSARTCSCSSGSVRA*SSSSRRRRSAAAIC
Trigger: GCAGATGGCCGCGGCGCTGCGGCGCCTGCGCGAGCTCGAGGACCAGGCGCGAACGCTGCCCGAGCTGCAGGAGCAGGTGCGCGCGCTGCG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330915.7
ENST00000593649.5
CDS GCA 90 bp CGAGACTCCCGACCTCCCCGTCGAGGACCTGGAGCGCGCCCTCGCTaGGCCCTGCAGCCAGGCCGTCTGGGCTGTCAGCCCGGGGGCTGG +
Preference number: 5 (lower is better)
Translates to: RDSRPPRRGPGARPR*ALQPGRLGCQPGGW
Trigger: CCAGCCCCCGGGCTGACAGCCCAGACGGCCTGGCTGCAGGGCGCAGCGAGGGCGCGCTCCAGGTCCTCGACGGGGAGGTCGGGAGTCTCG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330915.7
ENST00000593649.5
CDS GCA 90 bp GCGCCGCCGTCGCTGGCTACTCCGCGGGGCCGGCTCAGCTGCCGCTaGAGCGCTACGCACGCCTCCCTCAGACGCGGGCTCAGCTCGCAC +
Preference number: 5 (lower is better)
Translates to: APPSLATPRGRLSCR*SATHASLRRGLSSH
Trigger: GTGCGAGCTGAGCCCGCGTCTGAGGGAGGCGTGCGTAGCGCTGCAGCGGCAGCTGAGCCGGCCCCGCGGAGTAGCCAGCGACGGCGGCGC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330915.7
ENST00000593649.5
ENST00000595639.1
CDS GCA 90 bp CGCACTGCGCCGCCGTCGCTGGCTACTCCGCGGGGCCGGCTCAGCTaGCGCTGCAGCGCTACGCACGCCTCCCTCAGACGCGGGCTCAGC +
Preference number: 5 (lower is better)
Translates to: RTAPPSLATPRGRLS*RCSATHASLRRGLS
Trigger: GCTGAGCCCGCGTCTGAGGGAGGCGTGCGTAGCGCTGCAGCGGCAGCTGAGCCGGCCCCGCGGAGTAGCCAGCGACGGCGGCGCAGTGCG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330915.7
ENST00000593649.5
ENST00000595639.1
CDS GCA 90 bp TCGCGCAGGCGCCGCAGCGCCGCGGCCATCTGCTCGCGCACCAGCTaGAGTTGGGCAGGGCCGGGCGAAGCAGGGGCAAGGTTAGGGGCG +
Preference number: 5 (lower is better)
Translates to: SRRRRSAAAICSRTS*SWAGPGEAGARLGA
Trigger: CGCCCCTAACCTTGCCCCTGCTTCGCCCGGCCCTGCCCAACTGCAGCTGGTGCGCGAGCAGATGGCCGCGGCGCTGCGGCGCCTGCGCGA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330915.7
ENST00000593649.5
CDS CCA 90 bp GCGCGCGGCGACAGCGGCTGCATCAGGAGCCCCGAGGGCGCGCCCTaGGAGAGTATGCCCGGTGCTCCACCGTCGTCACTGGCCAGGGAC +
Preference number: 5 (lower is better)
Translates to: ARGDSGCIRSPEGAP*ESMPGAPPSSLARD
Trigger: GTCCCTGGCCAGTGACGACGGTGGAGCACCGGGCATACTCTCCCAGGGCGCGCCCTCGGGGCTCCTGATGCAGCCGCTGTCGCCGCGCGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330915.7
ENST00000593649.5
CDS CCA 90 bp GTCTGGGGCGTCCCATCGAGACTCCCGACCTCCCCGTCGAGGACCTaGAGCGCGCCCTCGCTGCGCCCTGCAGCCAGGCCGTCTGGGCTG +
Preference number: 5 (lower is better)
Translates to: VWGVPSRLPTSPSRT*SAPSLRPAARPSGL
Trigger: CAGCCCAGACGGCCTGGCTGCAGGGCGCAGCGAGGGCGCGCTCCAGGTCCTCGACGGGGAGGTCGGGAGTCTCGATGGGACGCCCCAGAC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330915.7
ENST00000593649.5
CDS CCA 90 bp GCTTCTCGGGTCTCGGGCACGGCCTCGGCGGCCACCTCCCGGGTCTaGGGCGTCCCATCGAGACTCCCGACCTCCCCGTCGAGGACCTGG +
Preference number: 5 (lower is better)
Translates to: ASRVSGTASAATSRV*GVPSRLPTSPSRTW
Trigger: CCAGGTCCTCGACGGGGAGGTCGGGAGTCTCGATGGGACGCCCCAGACCCGGGAGGTGGCCGCCGAGGCCGTGCCCGAGACCCGAGAAGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330915.7
ENST00000593649.5
CDS TCA 90 bp GGCGCCACGGCCCTGTCTCCGTCCATGGATCCGGGCGAGCTCTCCTaGGTCAAGGAGGGCGCCTCTGCCGGGGACTCGGTCTGCGCGGCC +
Preference number: 5 (lower is better)
Translates to: GATALSPSMDPGELS*VKEGASAGDSVCAA
Trigger: GGCCGCGCAGACCGAGTCCCCGGCAGAGGCGCCCTCCTTGACTCAGGAGAGCTCGCCCGGATCCATGGACGGAGACAGGGCCGTGGCGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330915.7
ENST00000593331.1
ENST00000593649.5
CDS CCA 90 bp CCGGGGGCTCGGCGCCACCGTTCTCGCTGTCGCCATCGCTGTCGCTaGCGTCCTCGCTGGAGGAGCTCTCGTACCTGGGGGCAGGGTGGG +
Preference number: 5 (lower is better)
Translates to: PGARRHRSRCRHRCR*RPRWRSSRTWGQGG
Trigger: CCCACCCTGCCCCCAGGTACGAGAGCTCCTCCAGCGAGGACGCCAGCGACAGCGATGGCGACAGCGAGAACGGTGGCGCCGAGCCCCCGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000610351.1
CDS CCA 90 bp AGAGTATGCCCGGTGCTCCACCGTCGTCACTGGCCAGGGACTCGCTaGATGTCCAGGCGCCTGGGCTACGTGCGCCCGCGAGGCCGGGCC +
Preference number: 5 (lower is better)
Translates to: RVCPVLHRRHWPGTR*MSRRLGYVRPRGRA
Trigger: GGCCCGGCCTCGCGGGCGCACGTAGCCCAGGCGCCTGGACATCCAGCGAGTCCCTGGCCAGTGACGACGGTGGAGCACCGGGCATACTCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330915.7
ENST00000593649.5
CDS CCA 90 bp TCCAGCTCCCGCAACCGGCCCCGCAGAAGCTCACTCACCCCGCGCTaGTGCTCCAGACTGGCGCGCAGCAGCTCTAGCTCGCGCTCGGCG +
Preference number: 5 (lower is better)
Translates to: SSSRNRPRRSSLTPR*CSRLARSSSSSRSA
Trigger: CGCCGAGCGCGAGCTAGAGCTGCTGCGCGCCAGTCTGGAGCACCAGCGCGGGGTGAGTGAGCTTCTGCGGGGCCGGTTGCGGGAGCTGGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330915.7
ENST00000593331.1
ENST00000593649.5
CDS CCA 90 bp AGGGCGCGCCCTGGGAGAGTATGCCCGGTGCTCCACCGTCGTCACTaGCCAGGGACTCGCTGGATGTCCAGGCGCCTGGGCTACGTGCGC +
Preference number: 5 (lower is better)
Translates to: RARPGRVCPVLHRRH*PGTRWMSRRLGYVR
Trigger: GCGCACGTAGCCCAGGCGCCTGGACATCCAGCGAGTCCCTGGCCAGTGACGACGGTGGAGCACCGGGCATACTCTCCCAGGGCGCGCCCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330915.7
ENST00000593649.5
CDS CCA 90 bp GCGCCAGCAGTTCGGGTCCCAGGCGCCTCACCCCTTCCAGCATCCTaGCCACGGGCTCCGCCTGAGAGCGCCGCTGGCTGGACACTCGAA +
Preference number: 5 (lower is better)
Translates to: APAVRVPGASPLPAS*PRAPPESAAGWTLE
Trigger: TTCGAGTGTCCAGCCAGCGGCGCTCTCAGGCGGAGCCCGTGGCCAGGATGCTGGAAGGGGTGAGGCGCCTGGGACCCGAACTGCTGGCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330915.7
ENST00000593649.5
ENST00000610351.1
CDS GCA 90 bp CTGCATCAGGAGCCCCGAGGGCGCGCCCTGGGAGAGTATGCCCGGTaGTCCACCGTCGTCACTGGCCAGGGACTCGCTGGATGTCCAGGC +
Preference number: 5 (lower is better)
Translates to: LHQEPRGRALGEYAR*STVVTGQGLAGCPG
Trigger: GCCTGGACATCCAGCGAGTCCCTGGCCAGTGACGACGGTGGAGCACCGGGCATACTCTCCCAGGGCGCGCCCTCGGGGCTCCTGATGCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330915.7
ENST00000593649.5
CDS GCA 90 bp ACAGCGGCTGCATCAGGAGCCCCGAGGGCGCGCCCTGGGAGAGTATaGCCGGTGCTCCACCGTCGTCACTGGCCAGGGACTCGCTGGATG +
Preference number: 5 (lower is better)
Translates to: TAAASGAPRARPGRV*PVLHRRHWPGTRWM
Trigger: CATCCAGCGAGTCCCTGGCCAGTGACGACGGTGGAGCACCGGGCATACTCTCCCAGGGCGCGCCCTCGGGGCTCCTGATGCAGCCGCTGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330915.7
ENST00000593649.5
CDS GCA 90 bp GTCCATGGATCCGGGCGAGCTCTCCTGAGTCAAGGAGGGCGCCTCTaGCGGGGACTCGGTCTGCGCGGCCTTTTCGGCACAGCTCCACGG +
Preference number: 5 (lower is better)
Translates to: VHGSGRALLSQGGRL*RGLGLRGLFGTAPR
Trigger: CCGTGGAGCTGTGCCGAAAAGGCCGCGCAGACCGAGTCCCCGGCAGAGGCGCCCTCCTTGACTCAGGAGAGCTCGCCCGGATCCATGGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330915.7
ENST00000593331.1
ENST00000593649.5
CDS GCA 90 bp GCAGCGCTACGCACGCCTCCCTCAGACGCGGGCTCAGCTCGCACCTaGAGAGGAGGCCAGGAGAGACTCAGGATGGATCGGGGACAGCGC +
Preference number: 5 (lower is better)
Translates to: AALRTPPSDAGSART*RGGQERLRMDRGQR
Trigger: GCGCTGTCCCCGATCCATCCTGAGTCTCTCCTGGCCTCCTCTGCAGGTGCGAGCTGAGCCCGCGTCTGAGGGAGGCGTGCGTAGCGCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610351.1
CDS CCA 90 bp CCAGGGGGTGACTCGCTCTGGGTGTCGGGCTGGCCCGAGCTCAGGTaGGCATGTAGCAGAGCGGCCACCTCATCCTGCTCAGCCTCCAGG +
Preference number: 5 (lower is better)
Translates to: PGGDSLWVSGWPELR*ACSRAATSSCSASR
Trigger: CCTGGAGGCTGAGCAGGATGAGGTGGCCGCTCTGCTACATGCCCACCTGAGCTCGGGCCAGCCCGACACCCAGAGCGAGTCACCCCCTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330915.7
CDS CCA 90 bp TGCCGCTGCACTCCAGCCTGGGTGTCGGGCTGGCCCGAGCTCAGGTaGGCATGTAGCAGAGCGGCCACCTCATCCTGCTCAGCCTCCAGG +
Preference number: 5 (lower is better)
Translates to: CRCTPAWVSGWPELR*ACSRAATSSCSASR
Trigger: CCTGGAGGCTGAGCAGGATGAGGTGGCCGCTCTGCTACATGCCCACCTGAGCTCGGGCCAGCCCGACACCCAGGCTGGAGTGCAGCGGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593649.5
CDS CCA 90 bp CGCCACCGTTCTCGCTGTCGCCATCGCTGTCGCTGGCGTCCTCGCTaGAGGAGCTCTCGTACCTGGGGGCAGGGTGGGAGGTGTCTGCTA +
Preference number: 5 (lower is better)
Translates to: RHRSRCRHRCRWRPR*RSSRTWGQGGRCLL
Trigger: TAGCAGACACCTCCCACCCTGCCCCCAGGTACGAGAGCTCCTCCAGCGAGGACGCCAGCGACAGCGATGGCGACAGCGAGAACGGTGGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000610351.1
CDS-3UTR CAA 90 bp GTGTTAGCCTCTGAGCAGGGGACCCTGGACCCTTCTGTGCGCCAAAGGCTGAGGCGCAGCTGGGCGAGCTaGTCCGGGCGCGTCTCAGCC +
Preference number: 5 (lower is better)
Translates to: VLASEQGTLDPSVRQRLRRSWAS*SGRVSA
Trigger: GGCTGAGACGCGCCCGGACAAGCTCGCCCAGCTGCG...CCTCAGCCTTTGGCGCACAGAAGGGTCCAGGGTCCCCTGCTCAGAGGCTAACAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330915.7
CDS CCA 90 bp CAGGGCACTGGTGCCCTCATTGTCCAGGATGGCAGGGTCACAGCCTaGCTGGGTGAGCAGCAGCCGCACGGTGTCCAGGCGCCCATACTC +
Preference number: 5 (lower is better)
Translates to: QGTGALIVQDGRVTA*LGEQQPHGVQAPIL
Trigger: GAGTATGGGCGCCTGGACACCGTGCGGCTGCTGCTCACCCAGCCAGGCTGTGACCCTGCCATCCTGGACAATGAGGGCACCAGTGCCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330915.7
ENST00000593649.5
CDS TCA 90 bp TGGTGCCCTCATTGTCCAGGATGGCAGGGTCACAGCCTGGCTGGGTaGGCAGCAGCCGCACGGTGTCCAGGCGCCCATACTCACTGGCAC +
Preference number: 5 (lower is better)
Translates to: WCPHCPGWQGHSLAG*AAAARCPGAHTHWH
Trigger: GTGCCAGTGAGTATGGGCGCCTGGACACCGTGCGGCTGCTGCTCACCCAGCCAGGCTGTGACCCTGCCATCCTGGACAATGAGGGCACCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330915.7
ENST00000593649.5
CDS CCA 90 bp TCGCTGGCGTCCTCGCTGGAGGAGCTCTCGTACCTGGGGGCAGGGTaGGAGGTGTCTGCTAAACCTCCCCTGTGGGCTCGTTCTGGAGTC +
Preference number: 5 (lower is better)
Translates to: SLASSLEELSYLGAG*EVSAKPPLWARSGV
Trigger: GACTCCAGAACGAGCCCACAGGGGAGGTTTAGCAGACACCTCCCACCCTGCCCCCAGGTACGAGAGCTCCTCCAGCGAGGACGCCAGCGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610351.1
CDS GCA 90 bp TCCACCCACCCTCCCTTGGCTCTGACCCGTATCCAGGAGCAGGCTTaGGATGGCCAGGTTCCCGTGGGACACACTGTAGTGCAGGGCCGT +
Preference number: 5 (lower is better)
Translates to: STHPPLALTRIQEQA*DGQVPVGHTVVQGR
Trigger: ACGGCCCTGCACTACAGTGTGTCCCACGGGAACCTGGCCATCGCAAGCCTGCTCCTGGATACGGGTCAGAGCCAAGGGAGGGTGGGTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610351.1
CDS CCA 90 bp CATGTAGCAGAGCGGCCACCTCATCCTGCTCAGCCTCCAGGGCGATaGCCAGGGCACTGGTGCCCTCATTGTCCAGGATGGCAGGGTCAC +
Preference number: 5 (lower is better)
Translates to: HVAERPPHPAQPPGR*PGHWCPHCPGWQGH
Trigger: GTGACCCTGCCATCCTGGACAATGAGGGCACCAGTGCCCTGGCCATCGCCCTGGAGGCTGAGCAGGATGAGGTGGCCGCTCTGCTACATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330915.7
ENST00000593649.5
CDS-3UTR CAA 90 bp GTGGATCAGGGCTCTATCACTTGGTCCCCACCTCACCTTGGTGGGGCCAGAGTGGCTCGGTTCTGGCGGTaGACCTCGCAGGCCCCCGTA +
Preference number: 5 (lower is better)
Translates to: VDQGSITWSPPHLGGARVARFWR*TSQAPV
Trigger: TACGGGGGCCTGCGAGGTCAACCGCCAGAACCGAGC...CACTCTGGCCCCACCAAGGTGAGGTGGGGACCAAGTGATAGAGCCCTGATCCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000330915.7
CDS TCA 90 bp CGCTGTCGCTGGCGTCCTCGCTGGAGGAGCTCTCGTACTCTCCGTTaGGGACCCCAACAAACTGCAGGCTCTTGGGTCCGGAGCTGGGTT +
Preference number: 5 (lower is better)
Translates to: RCRWRPRWRSSRTLR*GPQQTAGSWVRSWV
Trigger: AACCCAGCTCCGGACCCAAGAGCCTGCAGTTTGTTGGGGTCCTCAACGGAGAGTACGAGAGCTCCTCCAGCGAGGACGCCAGCGACAGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330915.7
ENST00000593649.5
ENST00000595639.1
CDS GCA 90 bp CAGGTCGGGCAGGTTCTGATTCAGGGCAAACTTGGCCATGTTTCCTaGAGCAGCTGTCAGAGGCACCCTGAAGCCGCAGCCCCAGCCGCG +
Preference number: 5 (lower is better)
Translates to: QVGQVLIQGKLGHVS*SSCQRHPEAAAPAA
Trigger: CGCGGCTGGGGCTGCGGCTTCAGGGTGCCTCTGACAGCTGCTGCAGGAAACATGGCCAAGTTTGCCCTGAATCAGAACCTGCCCGACCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330915.7
ENST00000593649.5
CDS GCA 90 bp CTGGACCACAGCCATGTCCTCCTCTTCCTGCCTCACAGAGGTGAGTaGAGCCAGCATGAGGGCCGAGTAGCCGGCTCGGTTCTGGCGGTT +
Preference number: 5 (lower is better)
Translates to: LDHSHVLLFLPHRGE*SQHEGRVAGSVLAV
Trigger: AACCGCCAGAACCGAGCCGGCTACTCGGCCCTCATGCTGGCTGCACTCACCTCTGTGAGGCAGGAAGAGGAGGACATGGCTGTGGTCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330915.7
ENST00000593649.5
CDS GCA 90 bp GATGCCGGGCAGGTTCTGATTCAGGGCAAACTTGGCCATGTTTCCTaGAGCAGCTGTCAGAGGCACCCTGAAGCCGCAGCCCCAGCCGCG +
Preference number: 5 (lower is better)
Translates to: DAGQVLIQGKLGHVS*SSCQRHPEAAAPAA
Trigger: CGCGGCTGGGGCTGCGGCTTCAGGGTGCCTCTGACAGCTGCTGCAGGAAACATGGCCAAGTTTGCCCTGAATCAGAACCTGCCCGGCATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595639.1
CDS CCA 90 bp TCGTACCTGGGGGCAGGGTGGGAGGTGTCTGCTAAACCTCCCCTGTaGGCTCGTTCTGGAGTCCTGCGATGTGGGTGTGGCCGTTCCCAT +
Preference number: 5 (lower is better)
Translates to: SYLGAGWEVSAKPPL*ARSGVLRCGCGRSH
Trigger: ATGGGAACGGCCACACCCACATCGCAGGACTCCAGAACGAGCCCACAGGGGAGGTTTAGCAGACACCTCCCACCCTGCCCCCAGGTACGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610351.1
CDS-3UTR CAA 90 bp GAGTGGGTGGATCAGGGCTCTATCACTTGGTCCCCACCTCACCTTGGTGGGGCCTATCCAGGAGCAGGCTaGCGATGGCCAGGTTCCCGT +
Preference number: 5 (lower is better)
Translates to: EWVDQGSITWSPPHLGGAYPGAG*RWPGSR
Trigger: ACGGGAACCTGGCCATCGCAAGCCTGCTCCTGGATA...GGCCCCACCAAGGTGAGGTGGGGACCAAGTGATAGAGCCCTGATCCACCCACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330915.7
CDS CCA 90 bp AAACTGAGGATTGCCCAGACCACGCTGCCAGTAGAGGGGCAGAGCTaGGGTTCCAACCCCAGTCTATGTCCCGGCAGAAGCTGCCACAGG +
Preference number: 5 (lower is better)
Translates to: KLRIAQTTLPVEGQS*GSNPSLCPGRSCHR
Trigger: CCTGTGGCAGCTTCTGCCGGGACATAGACTGGGGTTGGAACCCCAGCTCTGCCCCTCTACTGGCAGCGTGGTCTGGGCAATCCTCAGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593331.1
ENST00000610351.1
CDS-3UTR CAA 90 bp CTTCGGCCAGTGTTAGCCTCTGAGCAGGGGACCCTGGACCCTTCTGTGCGCCAATTCTTCATGATGGATTaGAGGATGCCCGCGGGCGCC +
Preference number: 5 (lower is better)
Translates to: LRPVLASEQGTLDPSVRQFFMMD*RMPAGA
Trigger: GGCGCCCGCGGGCATCCTCAAATCCATCATGAAGAA...TTGGCGCACAGAAGGGTCCAGGGTCCCCTGCTCAGAGGCTAACACTGGCCGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330915.7
CDS-3UTR CAA 90 bp GATCAGGGCTCTATCACTTGGTCCCCACCTCACCTTGGTGGGGCCAGAGTGAGCACAAACTGCAGGCTCTaGGGTCCGGAGCTGGGTTGG +
Preference number: 5 (lower is better)
Translates to: DQGSITWSPPHLGGARVSTNCRL*GPELGW
Trigger: CCAACCCAGCTCCGGACCCAAGAGCCTGCAGTTTGT...GCTCACTCTGGCCCCACCAAGGTGAGGTGGGGACCAAGTGATAGAGCCCTGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330915.7
CDS-3UTR CAA 90 bp GACCCTGGACCCTTCTGTGCGCCAAAGGCTGAGGTGACTGACGAGGAGATCTCCTCAGGGCTCTATCACTaGGTCCCCACCTCACCTTGG +
Preference number: 5 (lower is better)
Translates to: DPGPFCAPKAEVTDEEISSGLYH*VPTSPW
Trigger: CCAAGGTGAGGTGGGGACCAAGTGATAGAGCCCTGA...GGAGATCTCCTCGTCAGTCACCTCAGCCTTTGGCGCACAGAAGGGTCCAGGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330915.7
CDS-3UTR CAA 90 bp GTTTCAGAGAGTGGGTGGATCAGGGCTCTATCACTTGGTCCCCACCTCACCTTGCACACGCCAGTAGGGTaGCCACCATGTCCTGTCGGC +
Preference number: 5 (lower is better)
Translates to: VSESGWIRALSLGPHLTLHTPVG*PPCPVG
Trigger: GCCGACAGGACATGGTGGCAACCCTACTGGCGTGTG...CAAGGTGAGGTGGGGACCAAGTGATAGAGCCCTGATCCACCCACTCTCTGAAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330915.7
CDS-3UTR CAA 90 bp CTTCGGCCAGTGTTAGCCTCTGAGCAGGGGACCCTGGACCCTTCTGTGCGCCAATCACCCCAACTGAAATaGCCTTTCTCTTCGGCCAGT +
Preference number: 5 (lower is better)
Translates to: LRPVLASEQGTLDPSVRQSPQLK*PFSSAS
Trigger: ACTGGCCGAAGAGAAAGGCAATTTCAGTTGGGGTGA...TTGGCGCACAGAAGGGTCCAGGGTCCCCTGCTCAGAGGCTAACACTGGCCGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330915.7
CDS CCA 90 bp TTGAGGACCCCAACAAACTGCAGGCTCTTGGGTCCGGAGCTGGGTTaGGCACCAGGTGTGCCGTCTCTCTTCTTCATGATGGATTTGAGG +
Preference number: 5 (lower is better)
Translates to: LRTPTNCRLLGPELG*APGVPSLFFMMDLR
Trigger: CCTCAAATCCATCATGAAGAAGAGAGACGGCACACCTGGTGCCCAACCCAGCTCCGGACCCAAGAGCCTGCAGTTTGTTGGGGTCCTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330915.7
ENST00000593331.1
ENST00000593649.5
ENST00000595639.1
ENST00000610351.1
CDS-3UTR CAA 90 bp TTATTAGCAAAGAAGTTTCAGAGAGTGGGTGGATCAGGGCTCTATCACTTGGTCGCGCACCAGCTGCAGTaGGGCAGGGCCGGGCGAAGC +
Preference number: 5 (lower is better)
Translates to: LLAKKFQRVGGSGLYHLVAHQLQ*GRAGRS
Trigger: GCTTCGCCCGGCCCTGCCCAACTGCAGCTGGTGCGC...GACCAAGTGATAGAGCCCTGATCCACCCACTCTCTGAAACTTCTTTGCTAATAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330915.7
CDS-3UTR CAA 90 bp TCAGAGAGTGGGTGGATCAGGGCTCTATCACTTGGTCCCCACCTCACCTTGGTGCTCTCGTACTCTCCGTaGAGGACCCCAACAAACTGC +
Preference number: 5 (lower is better)
Translates to: SESGWIRALSLGPHLTLVLSYSP*RTPTNC
Trigger: GCAGTTTGTTGGGGTCCTCAACGGAGAGTACGAGAG...CACCAAGGTGAGGTGGGGACCAAGTGATAGAGCCCTGATCCACCCACTCTCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330915.7
CDS-3UTR CAA 90 bp AGTGAGCCCCTTCCTGCCACAGTCACCCCAACTGAAATTGCCTTTCTCTTCGGCTGGGGGTTCTCTCCATaGTCACCGCATTCTCCTTCA +
Preference number: 5 (lower is better)
Translates to: SEPLPATVTPTEIAFLFGWGFSP*SPHSPS
Trigger: TGAAGGAGAATGCGGTGACAATGGAGAGAACCCCCA...GCCGAAGAGAAAGGCAATTTCAGTTGGGGTGACTGTGGCAGGAAGGGGCTCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000330915.7
CDS-3UTR CAA 90 bp ATTGAATACTCTGCTGAAGTGTGGTTTTTACTAAGCACACATTGCTTTTATGCTGCGCACCAGCTGCAGTaGGGCAGGGCCGGGCGAAGC +
Preference number: 5 (lower is better)
Translates to: IEYSAEVWFLLSTHCFYAAHQLQ*GRAGRS
Trigger: GCTTCGCCCGGCCCTGCCCAACTGCAGCTGGTGCGC...AGCATAAAAGCAATGTGTGCTTAGTAAAAACCACACTTCAGCAGAGTATTCAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593649.5
CDS-3UTR CAA 90 bp ATTGAATACTCTGCTGAAGTGTGGTTTTTACTAAGCACACATTGCTTTTATGCTCGCAGCTGGGCGAGCTaGTCCGGGCGCGTCTCAGCC +
Preference number: 5 (lower is better)
Translates to: IEYSAEVWFLLSTHCFYARSWAS*SGRVSA
Trigger: GGCTGAGACGCGCCCGGACAAGCTCGCCCAGCTGCG...AGCATAAAAGCAATGTGTGCTTAGTAAAAACCACACTTCAGCAGAGTATTCAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593649.5
CDS-3UTR CAA 90 bp GTTTTATTAGCAAAGAAGTTTCAGAGAGTGGGTGGATCAGGGCTCTATCACTTGGCACTGGTGCCCTCATaGTCCAGGATGGCAGGGTCA +
Preference number: 5 (lower is better)
Translates to: VLLAKKFQRVGGSGLYHLALVPS*SRMAGS
Trigger: TGACCCTGCCATCCTGGACAATGAGGGCACCAGTGC...CAAGTGATAGAGCCCTGATCCACCCACTCTCTGAAACTTCTTTGCTAATAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330915.7
CDS-3UTR CAA 90 bp ATTGAATACTCTGCTGAAGTGTGGTTTTTACTAAGCACACATTGCTTTTATGCTGCTCGGTTCTGGCGGTaGACCTCGCAGGCCCCCGTA +
Preference number: 5 (lower is better)
Translates to: IEYSAEVWFLLSTHCFYAARFWR*TSQAPV
Trigger: TACGGGGGCCTGCGAGGTCAACCGCCAGAACCGAGC...AGCATAAAAGCAATGTGTGCTTAGTAAAAACCACACTTCAGCAGAGTATTCAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000593649.5
CDS-3UTR CAA 90 bp ATTGAATACTCTGCTGAAGTGTGGTTTTTACTAAGCACACATTGCTTTTATGCTCACACGCCAGTAGGGTaGCCACCATGTCCTGTCGGC +
Preference number: 5 (lower is better)
Translates to: IEYSAEVWFLLSTHCFYAHTPVG*PPCPVG
Trigger: GCCGACAGGACATGGTGGCAACCCTACTGGCGTGTG...AGCATAAAAGCAATGTGTGCTTAGTAAAAACCACACTTCAGCAGAGTATTCAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593649.5
CDS-3UTR CAA 90 bp ATTGAATACTCTGCTGAAGTGTGGTTTTTACTAAGCACACATTGCTTTTATGCTACAAACTGCAGGCTCTaGGGTCCGGAGCTGGGTTGG +
Preference number: 5 (lower is better)
Translates to: IEYSAEVWFLLSTHCFYATNCRL*GPELGW
Trigger: CCAACCCAGCTCCGGACCCAAGAGCCTGCAGTTTGT...AGCATAAAAGCAATGTGTGCTTAGTAAAAACCACACTTCAGCAGAGTATTCAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593649.5
CDS-3UTR CAA 90 bp ATTGAATACTCTGCTGAAGTGTGGTTTTTACTAAGCACACATTGCTTTTATGCTTATCCAGGAGCAGGCTaGCGATGGCCAGGTTCCCGT +
Preference number: 5 (lower is better)
Translates to: IEYSAEVWFLLSTHCFYAYPGAG*RWPGSR
Trigger: ACGGGAACCTGGCCATCGCAAGCCTGCTCCTGGATA...AGCATAAAAGCAATGTGTGCTTAGTAAAAACCACACTTCAGCAGAGTATTCAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593649.5
CDS-3UTR CAA 90 bp ATTGAATACTCTGCTGAAGTGTGGTTTTTACTAAGCACACATTGCTTTTATGCTGCACTGGTGCCCTCATaGTCCAGGATGGCAGGGTCA +
Preference number: 5 (lower is better)
Translates to: IEYSAEVWFLLSTHCFYAALVPS*SRMAGS
Trigger: TGACCCTGCCATCCTGGACAATGAGGGCACCAGTGC...AGCATAAAAGCAATGTGTGCTTAGTAAAAACCACACTTCAGCAGAGTATTCAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593649.5
CDS-3UTR CAA 90 bp ATTGAATACTCTGCTGAAGTGTGGTTTTTACTAAGCACACATTGCTTTTATGCTCTCTCGTACTCTCCGTaGAGGACCCCAACAAACTGC +
Preference number: 5 (lower is better)
Translates to: IEYSAEVWFLLSTHCFYALSYSP*RTPTNC
Trigger: GCAGTTTGTTGGGGTCCTCAACGGAGAGTACGAGAG...AGCATAAAAGCAATGTGTGCTTAGTAAAAACCACACTTCAGCAGAGTATTCAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000593649.5
CDS GCA 72 bp CGCGGGTTGCGCACGGGCGCGCGCGGCGACAGCGGCTaGATCAGGAGCCCCGAGGGCGCGCCCTGGGAGAGT +
Preference number: 6 (lower is better)
Translates to: RGLRTGARGDSG*IRSPEGAPWES
Trigger: ACTCTCCCAGGGCGCGCCCTCGGGGCTCCTGATGCAGCCGCTGTCGCCGCGCGCGCCCGTGCGCAACCCGCG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330915.7
ENST00000593649.5
CDS CCA 72 bp CTGCAGCCAGGCCGTCTGGGCTGTCAGCCCGGGGGCTaGCCCTGGCACGGCCGCCGCGCTCGGAGGTGGCCA +
Preference number: 6 (lower is better)
Translates to: LQPGRLGCQPGG*PWHGRRARRWP
Trigger: TGGCCACCTCCGAGCGCGGCGGCCGTGCCAGGGCCAGCCCCCGGGCTGACAGCCCAGACGGCCTGGCTGCAG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330915.7
ENST00000593649.5
CDS CAA 90 bp TCGGAGGTGGCCAGGCGCTCGGTGAGCCGCCGCAGCTGGGCGAGCTaGTCCGGGCGCGTCTCAGCCTCCCCGTCCGGCTCGGGCTGCGCG +
Preference number: 6 (lower is better)
Translates to: SEVARRSVSRRSWAS*SGRVSASPSGSGCA
Trigger: CGCGCAGCCCGAGCCGGACGGGGAGGCTGAGACGCGCCCGGACAAGCTCGCCCAGCTGCGGCGGCTCACCGAGCGCCTGGCCACCTCCGA
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330915.7
ENST00000593649.5
CDS GCA 72 bp TCGAGCTCGCGCAGGCGCCGCAGCGCCGCGGCCATCTaGTCGCGCACCAGCTGCAGTTGGGCAGGGCCGGGC +
Preference number: 6 (lower is better)
Translates to: SSSRRRRSAAAI*SRTSCSWAGPG
Trigger: GCCCGGCCCTGCCCAACTGCAGCTGGTGCGCGAGCAGATGGCCGCGGCGCTGCGGCGCCTGCGCGAGCTCGA
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330915.7
ENST00000593649.5
CDS GCA 72 bp CCCGTCGAGGACCTGGAGCGCGCCCTCGCTGCGCCCTaGAGCCAGGCCGTCTGGGCTGTCAGCCCGGGGGCT +
Preference number: 6 (lower is better)
Translates to: PVEDLERALAAP*SQAVWAVSPGA
Trigger: AGCCCCCGGGCTGACAGCCCAGACGGCCTGGCTGCAGGGCGCAGCGAGGGCGCGCTCCAGGTCCTCGACGGG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330915.7
ENST00000593649.5
CDS CCA 72 bp GTCACTGGCCAGGGACTCGCTGGATGTCCAGGCGCCTaGGCTACGTGCGCCCGCGAGGCCGGGCCGGGGCGC +
Preference number: 6 (lower is better)
Translates to: VTGQGLAGCPGA*ATCAREAGPGR
Trigger: GCGCCCCGGCCCGGCCTCGCGGGCGCACGTAGCCCAGGCGCCTGGACATCCAGCGAGTCCCTGGCCAGTGAC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330915.7
ENST00000593649.5
CDS CCA 72 bp CGCACCTGCTCCTGCAGCTCGGGCAGCGTTCGCGCCTaGTCCTCGAGCTCGCGCAGGCGCCGCAGCGCCGCG +
Preference number: 6 (lower is better)
Translates to: RTCSCSSGSVRA*SSSSRRRRSAA
Trigger: CGCGGCGCTGCGGCGCCTGCGCGAGCTCGAGGACCAGGCGCGAACGCTGCCCGAGCTGCAGGAGCAGGTGCG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330915.7
ENST00000593649.5
CDS GCA 72 bp CGCGCCTTCTCGGCGCGCAGCGCGCGCACCTGCTCCTaGAGCTCGGGCAGCGTTCGCGCCTGGTCCTCGAGC +
Preference number: 6 (lower is better)
Translates to: RAFSARSARTCS*SSGSVRAWSSS
Trigger: GCTCGAGGACCAGGCGCGAACGCTGCCCGAGCTGCAGGAGCAGGTGCGCGCGCTGCGCGCCGAGAAGGCGCG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330915.7
ENST00000593649.5
CDS CCA 72 bp TCGGAGGTGGCCAGGCGCTCGGTGAGCCGCCGCAGCTaGGCGAGCTTGTCCGGGCGCGTCTCAGCCTCCCCG +
Preference number: 6 (lower is better)
Translates to: SEVARRSVSRRS*ASLSGRVSASP
Trigger: CGGGGAGGCTGAGACGCGCCCGGACAAGCTCGCCCAGCTGCGGCGGCTCACCGAGCGCCTGGCCACCTCCGA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330915.7
ENST00000593649.5
CDS CCA 72 bp GTCTCGGGCACGGCCTCGGCGGCCACCTCCCGGGTCTaGGGCGTCCCATCGAGACTCCCGACCTCCCCGTCG +
Preference number: 6 (lower is better)
Translates to: VSGTASAATSRV*GVPSRLPTSPS
Trigger: CGACGGGGAGGTCGGGAGTCTCGATGGGACGCCCCAGACCCGGGAGGTGGCCGCCGAGGCCGTGCCCGAGAC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330915.7
ENST00000593649.5
CDS CCA 72 bp CGCGCTCGTGTGTCTGCGCCAGCTCCAGCCGCCGGCTaGTCTCCCGGAGCGTGTGCTCGACGCGCGGGTTGC +
Preference number: 6 (lower is better)
Translates to: RARVSAPAPAAG*SPGACARRAGC
Trigger: GCAACCCGCGCGTCGAGCACACGCTCCGGGAGACCAGCCGGCGGCTGGAGCTGGCGCAGACACACGAGCGCG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330915.7
ENST00000593649.5
CDS CCA 72 bp GTCCCATCGAGACTCCCGACCTCCCCGTCGAGGACCTaGAGCGCGCCCTCGCTGCGCCCTGCAGCCAGGCCG +
Preference number: 6 (lower is better)
Translates to: VPSRLPTSPSRT*SAPSLRPAARP
Trigger: CGGCCTGGCTGCAGGGCGCAGCGAGGGCGCGCTCCAGGTCCTCGACGGGGAGGTCGGGAGTCTCGATGGGAC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330915.7
ENST00000593649.5
CDS CCA 72 bp GTTCGGGTCCCAGGCGCCTCACCCCTTCCAGCATCCTaGCCACGGGCTCCGCCTGAGAGCGCCGCTGGCTGG +
Preference number: 6 (lower is better)
Translates to: VRVPGASPLPAS*PRAPPESAAGW
Trigger: CCAGCCAGCGGCGCTCTCAGGCGGAGCCCGTGGCCAGGATGCTGGAAGGGGTGAGGCGCCTGGGACCCGAAC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330915.7
ENST00000593649.5
ENST00000610351.1
CDS GCA 72 bp GAGCCCCGAGGGCGCGCCCTGGGAGAGTATGCCCGGTaGTCCACCGTCGTCACTGGCCAGGGACTCGCTGGA +
Preference number: 6 (lower is better)
Translates to: EPRGRALGEYAR*STVVTGQGLAG
Trigger: TCCAGCGAGTCCCTGGCCAGTGACGACGGTGGAGCACCGGGCATACTCTCCCAGGGCGCGCCCTCGGGGCTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330915.7
ENST00000593649.5
CDS CCA 72 bp CCGGTGCTCCACCGTCGTCACTGGCCAGGGACTCGCTaGATGTCCAGGCGCCTGGGCTACGTGCGCCCGCGA +
Preference number: 6 (lower is better)
Translates to: PVLHRRHWPGTR*MSRRLGYVRPR
Trigger: TCGCGGGCGCACGTAGCCCAGGCGCCTGGACATCCAGCGAGTCCCTGGCCAGTGACGACGGTGGAGCACCGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330915.7
ENST00000593649.5
CDS CCA 72 bp AGCGCCGCGGCCATCTGCTCGCGCACCAGCTGCAGTTaGGCAGGGCCGGGCGAAGCAGGGGCAAGGTTAGGG +
Preference number: 6 (lower is better)
Translates to: SAAAICSRTSCS*AGPGEAGARLG
Trigger: CCCTAACCTTGCCCCTGCTTCGCCCGGCCCTGCCCAACTGCAGCTGGTGCGCGAGCAGATGGCCGCGGCGCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330915.7
ENST00000593649.5
CDS CCA 72 bp GCAGAAGCTCACTCACCCCGCGCTGGTGCTCCAGACTaGCGCGCAGCAGCTCTAGCTCGCGCTCGGCGGCCG +
Preference number: 6 (lower is better)
Translates to: AEAHSPRAGAPD*RAAALARARRP
Trigger: CGGCCGCCGAGCGCGAGCTAGAGCTGCTGCGCGCCAGTCTGGAGCACCAGCGCGGGGTGAGTGAGCTTCTGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330915.7
ENST00000593331.1
ENST00000593649.5
CDS CCA 72 bp GGATGCCCGCGGGCGCCACGGCCCTGTCTCCGTCCATaGATCCGGGCGAGCTCTCCTGAGTCAAGGAGGGCG +
Preference number: 6 (lower is better)
Translates to: GCPRAPRPCLRP*IRASSPESRRA
Trigger: CGCCCTCCTTGACTCAGGAGAGCTCGCCCGGATCCATGGACGGAGACAGGGCCGTGGCGCCCGCGGGCATCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330915.7
ENST00000593331.1
ENST00000593649.5
CDS CAA 72 bp CAGCGCCGCGGCCATCTGCTCGCGCACCAGCTGCAGTaGGGCAGGGCCGGGCGAAGCAGGGGCAAGGTTAGG +
Preference number: 6 (lower is better)
Translates to: QRRGHLLAHQLQ*GRAGRSRGKVR
Trigger: CCTAACCTTGCCCCTGCTTCGCCCGGCCCTGCCCAACTGCAGCTGGTGCGCGAGCAGATGGCCGCGGCGCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330915.7
ENST00000593649.5
CDS GCA 72 bp GCATCAGGAGCCCCGAGGGCGCGCCCTGGGAGAGTATaGCCGGTGCTCCACCGTCGTCACTGGCCAGGGACT +
Preference number: 6 (lower is better)
Translates to: ASGAPRARPGRV*PVLHRRHWPGT
Trigger: AGTCCCTGGCCAGTGACGACGGTGGAGCACCGGGCATACTCTCCCAGGGCGCGCCCTCGGGGCTCCTGATGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330915.7
ENST00000593649.5
CDS CCA 72 bp GACAGCGGCTGCATCAGGAGCCCCGAGGGCGCGCCCTaGGAGAGTATGCCCGGTGCTCCACCGTCGTCACTG +
Preference number: 6 (lower is better)
Translates to: DSGCIRSPEGAP*ESMPGAPPSSL
Trigger: CAGTGACGACGGTGGAGCACCGGGCATACTCTCCCAGGGCGCGCCCTCGGGGCTCCTGATGCAGCCGCTGTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330915.7
ENST00000593649.5
CDS CCA 72 bp CGCAACCGGCCCCGCAGAAGCTCACTCACCCCGCGCTaGTGCTCCAGACTGGCGCGCAGCAGCTCTAGCTCG +
Preference number: 6 (lower is better)
Translates to: RNRPRRSSLTPR*CSRLARSSSSS
Trigger: CGAGCTAGAGCTGCTGCGCGCCAGTCTGGAGCACCAGCGCGGGGTGAGTGAGCTTCTGCGGGGCCGGTTGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330915.7
ENST00000593331.1
ENST00000593649.5
CDS CCA 72 bp CGGCGCCACCGTTCTCGCTGTCGCCATCGCTGTCGCTaGCGTCCTCGCTGGAGGAGCTCTCGTACCTGGGGG +
Preference number: 6 (lower is better)
Translates to: RRHRSRCRHRCR*RPRWRSSRTWG
Trigger: CCCCCAGGTACGAGAGCTCCTCCAGCGAGGACGCCAGCGACAGCGATGGCGACAGCGAGAACGGTGGCGCCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610351.1
CDS TCA 72 bp GCCCTGTCTCCGTCCATGGATCCGGGCGAGCTCTCCTaGGTCAAGGAGGGCGCCTCTGCCGGGGACTCGGTC +
Preference number: 6 (lower is better)
Translates to: ALSPSMDPGELS*VKEGASAGDSV
Trigger: GACCGAGTCCCCGGCAGAGGCGCCCTCCTTGACTCAGGAGAGCTCGCCCGGATCCATGGACGGAGACAGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330915.7
ENST00000593331.1
ENST00000593649.5
CDS GCA 72 bp TCCGGGCGAGCTCTCCTGAGTCAAGGAGGGCGCCTCTaGCGGGGACTCGGTCTGCGCGGCCTTTTCGGCACA +
Preference number: 6 (lower is better)
Translates to: SGRALLSQGGRL*RGLGLRGLFGT
Trigger: TGTGCCGAAAAGGCCGCGCAGACCGAGTCCCCGGCAGAGGCGCCCTCCTTGACTCAGGAGAGCTCGCCCGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330915.7
ENST00000593331.1
ENST00000593649.5
CDS GCA 72 bp GCCGTGTTCCCGTTGCCATCCGCCAGGTTCACCACGTaGGCCAGCAGTTCGGGTCCCAGGCGCCTCACCCCT +
Preference number: 6 (lower is better)
Translates to: AVFPLPSARFTT*ASSSGPRRLTP
Trigger: AGGGGTGAGGCGCCTGGGACCCGAACTGCTGGCGCACGTGGTGAACCTGGCGGATGGCAACGGGAACACGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330915.7
ENST00000593649.5
ENST00000610351.1
CDS CCA 72 bp CCTGGGAGAGTATGCCCGGTGCTCCACCGTCGTCACTaGCCAGGGACTCGCTGGATGTCCAGGCGCCTGGGC +
Preference number: 6 (lower is better)
Translates to: PGRVCPVLHRRH*PGTRWMSRRLG
Trigger: GCCCAGGCGCCTGGACATCCAGCGAGTCCCTGGCCAGTGACGACGGTGGAGCACCGGGCATACTCTCCCAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330915.7
ENST00000593649.5
CDS CCA 72 bp TCTCGCTGTCGCCATCGCTGTCGCTGGCGTCCTCGCTaGAGGAGCTCTCGTACCTGGGGGCAGGGTGGGAGG +
Preference number: 6 (lower is better)
Translates to: SRCRHRCRWRPR*RSSRTWGQGGR
Trigger: CCTCCCACCCTGCCCCCAGGTACGAGAGCTCCTCCAGCGAGGACGCCAGCGACAGCGATGGCGACAGCGAGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000610351.1
CDS GCA 72 bp CTCCAAACAACTAGCGAGCGCCGCTCACCTCCCCTGTaGCACCTGCTGAGGCTCTGCCTCCGCCTCGGGCTC +
Preference number: 6 (lower is better)
Translates to: LQTTSERRSPPL*HLLRLCLRLGL
Trigger: GAGCCCGAGGCGGAGGCAGAGCCTCAGCAGGTGGCACAGGGGAGGTGAGCGGCGCTCGCTAGTTGTTTGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610351.1
CDS GCA 72 bp CGCACGCCTCCCTCAGACGCGGGCTCAGCTCGCACCTaGAGAGGAGGCCAGGAGAGACTCAGGATGGATCGG +
Preference number: 6 (lower is better)
Translates to: RTPPSDAGSART*RGGQERLRMDR
Trigger: CCGATCCATCCTGAGTCTCTCCTGGCCTCCTCTGCAGGTGCGAGCTGAGCCCGCGTCTGAGGGAGGCGTGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610351.1
CDS CCA 72 bp GACTCGCTCTGGGTGTCGGGCTGGCCCGAGCTCAGGTaGGCATGTAGCAGAGCGGCCACCTCATCCTGCTCA +
Preference number: 6 (lower is better)
Translates to: DSLWVSGWPELR*ACSRAATSSCS
Trigger: TGAGCAGGATGAGGTGGCCGCTCTGCTACATGCCCACCTGAGCTCGGGCCAGCCCGACACCCAGAGCGAGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330915.7
CDS CAA 90 bp GTCCACCCACCCTCCCTTGGCTCTGACCCGTATCCAGGAGCAGGCTaGCGATGGCCAGGTTCCCGTGGGACACACTGTAGTGCAGGGCCG +
Preference number: 6 (lower is better)
Translates to: VHPPSLGSDPYPGAG*RWPGSRGTHCSAGP
Trigger: CGGCCCTGCACTACAGTGTGTCCCACGGGAACCTGGCCATCGCAAGCCTGCTCCTGGATACGGGTCAGAGCCAAGGGAGGGTGGGTGGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610351.1
CDS CCA 72 bp GGGGCAGGGTGGGAGGTGTCTGCTAAACCTCCCCTGTaGGCTCGTTCTGGAGTCCTGCGATGTGGGTGTGGC +
Preference number: 6 (lower is better)
Translates to: GAGWEVSAKPPL*ARSGVLRCGCG
Trigger: GCCACACCCACATCGCAGGACTCCAGAACGAGCCCACAGGGGAGGTTTAGCAGACACCTCCCACCCTGCCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593331.1
ENST00000610351.1
CDS CCA 72 bp TTGTCACCGCATTCTCCTTCACCAGGTGTGGCTGTCTaGGAGCCAGGGGGTGACTCGCTCTGGGTGTCGGGC +
Preference number: 6 (lower is better)
Translates to: LSPHSPSPGVAV*EPGGDSLWVSG
Trigger: GCCCGACACCCAGAGCGAGTCACCCCCTGGCTCCCAGACAGCCACACCTGGTGAAGGAGAATGCGGTGACAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330915.7
CDS CAA 72 bp CACTCTCCGTTGAGGACCCCAACAAACTGCAGGCTCTaGGGTCCGGAGCTGGGTTGGGCACCAGGTGTGCCG +
Preference number: 6 (lower is better)
Translates to: HSPLRTPTNCRL*GPELGWAPGVP
Trigger: CGGCACACCTGGTGCCCAACCCAGCTCCGGACCCAAGAGCCTGCAGTTTGTTGGGGTCCTCAACGGAGAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593331.1
ENST00000610351.1
CDS TCA 72 bp TGGCGTCCTCGCTGGAGGAGCTCTCGTACTCTCCGTTaGGGACCCCAACAAACTGCAGGCTCTTGGGTCCGG +
Preference number: 6 (lower is better)
Translates to: WRPRWRSSRTLR*GPQQTAGSWVR
Trigger: CCGGACCCAAGAGCCTGCAGTTTGTTGGGGTCCTCAACGGAGAGTACGAGAGCTCCTCCAGCGAGGACGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330915.7
ENST00000593649.5
ENST00000595639.1
CDS GCA 72 bp CCTCCCTTGGCTCTGACCCGTATCCAGGAGCAGGCTTaGGATGGCCAGGTTCCCGTGGGACACACTGTAGTG +
Preference number: 6 (lower is better)
Translates to: PPLALTRIQEQA*DGQVPVGHTVV
Trigger: CACTACAGTGTGTCCCACGGGAACCTGGCCATCGCAAGCCTGCTCCTGGATACGGGTCAGAGCCAAGGGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610351.1
CDS CAA 72 bp TACTCTCCGTTGAGGACCCCAACAAACTGCAGGCTCTaGGGTCCGGAGCTGGGTTGGGCACCAGGTGTGCCG +
Preference number: 6 (lower is better)
Translates to: YSPLRTPTNCRL*GPELGWAPGVP
Trigger: CGGCACACCTGGTGCCCAACCCAGCTCCGGACCCAAGAGCCTGCAGTTTGTTGGGGTCCTCAACGGAGAGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330915.7
ENST00000593649.5
ENST00000595639.1
CDS CAA 72 bp CCCTCCCTTGGCTCTGACCCGTATCCAGGAGCAGGCTaGCGATGGCCAGGTTCCCGTGGGACACACTGTAGT +
Preference number: 6 (lower is better)
Translates to: PSLGSDPYPGAG*RWPGSRGTHCS
Trigger: ACTACAGTGTGTCCCACGGGAACCTGGCCATCGCAAGCCTGCTCCTGGATACGGGTCAGAGCCAAGGGAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610351.1
CDS CAA 90 bp GAGCTCTCGTACTCTCCGTTGAGGACCCCAACAAACTGCAGGCTCTaGGGTCCGGAGCTGGGTTGGGCACCAGGTGTGCCGTCTCTCTTC +
Preference number: 6 (lower is better)
Translates to: ELSYSPLRTPTNCRL*GPELGWAPGVPSLF
Trigger: GAAGAGAGACGGCACACCTGGTGCCCAACCCAGCTCCGGACCCAAGAGCCTGCAGTTTGTTGGGGTCCTCAACGGAGAGTACGAGAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330915.7
ENST00000593649.5
ENST00000595639.1
CDS CAA 90 bp AAAGGCGCTCACTCTCCGTTGAGGACCCCAACAAACTGCAGGCTCTaGGGTCCGGAGCTGGGTTGGGCACCAGGTGTGCCGTCTCTCTTC +
Preference number: 6 (lower is better)
Translates to: KGAHSPLRTPTNCRL*GPELGWAPGVPSLF
Trigger: GAAGAGAGACGGCACACCTGGTGCCCAACCCAGCTCCGGACCCAAGAGCCTGCAGTTTGTTGGGGTCCTCAACGGAGAGTGAGCGCCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593331.1
ENST00000610351.1
CDS CCA 72 bp GGACCCCAACAAACTGCAGGCTCTTGGGTCCGGAGCTaGGTTGGGCACCAGGTGTGCCGTCTCTCTTCTTCA +
Preference number: 6 (lower is better)
Translates to: GPQQTAGSWVRS*VGHQVCRLSSS
Trigger: TGAAGAAGAGAGACGGCACACCTGGTGCCCAACCCAGCTCCGGACCCAAGAGCCTGCAGTTTGTTGGGGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330915.7
ENST00000593331.1
ENST00000593649.5
ENST00000595639.1
ENST00000610351.1
CDS CAA 72 bp AAGCTGCCACAGGAGGGGAAAGGCGCTCACTCTCCGTaGAGGACCCCAACAAACTGCAGGCTCTTGGGTCCG +
Preference number: 6 (lower is better)
Translates to: KLPQEGKGAHSP*RTPTNCRLLGP
Trigger: CGGACCCAAGAGCCTGCAGTTTGTTGGGGTCCTCAACGGAGAGTGAGCGCCTTTCCCCTCCTGTGGCAGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593331.1
ENST00000610351.1
CDS GCA 72 bp CAGGTTCTGATTCAGGGCAAACTTGGCCATGTTTCCTaGAGCAGCTGTCAGAGGCACCCTGAAGCCGCAGCC +
Preference number: 6 (lower is better)
Translates to: QVLIQGKLGHVS*SSCQRHPEAAA
Trigger: GGCTGCGGCTTCAGGGTGCCTCTGACAGCTGCTGCAGGAAACATGGCCAAGTTTGCCCTGAATCAGAACCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330915.7
ENST00000593649.5
ENST00000595639.1
CDS CCA 72 bp CCAACAAACTGCAGGCTCTTGGGTCCGGAGCTGGGTTaGGCACCAGGTGTGCCGTCTCTCTTCTTCATGATG +
Preference number: 6 (lower is better)
Translates to: PTNCRLLGPELG*APGVPSLFFMM
Trigger: CATCATGAAGAAGAGAGACGGCACACCTGGTGCCCAACCCAGCTCCGGACCCAAGAGCCTGCAGTTTGTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330915.7
ENST00000593331.1
ENST00000593649.5
ENST00000595639.1
ENST00000610351.1
CDS CAA 90 bp GTTGAGGACCCCAACAAACTGCAGGCTCTTGGGTCCGGAGCTGGGTaGGGCACCAGGTGTGCCGTCTCTCTTCTTCATGATGGATTTGAG +
Preference number: 6 (lower is better)
Translates to: VEDPNKLQALGSGAG*GTRCAVSLLHDGFE
Trigger: CTCAAATCCATCATGAAGAAGAGAGACGGCACACCTGGTGCCCAACCCAGCTCCGGACCCAAGAGCCTGCAGTTTGTTGGGGTCCTCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330915.7
ENST00000593331.1
ENST00000593649.5
ENST00000595639.1
ENST00000610351.1
CDS CCA 72 bp ACCTCCCCTGTGGGCTCGTTCTGGAGTCCTGCGATGTaGGTGTGGCCGTTCCCATTTAACGATGAGGAAACT +
Preference number: 6 (lower is better)
Translates to: TSPVGSFWSPAM*VWPFPFNDEET
Trigger: AGTTTCCTCATCGTTAAATGGGAACGGCCACACCCACATCGCAGGACTCCAGAACGAGCCCACAGGGGAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593331.1
ENST00000610351.1
CDS CCA 72 bp CCTGTGGGCTCGTTCTGGAGTCCTGCGATGTGGGTGTaGCCGTTCCCATTTAACGATGAGGAAACTGAGGAT +
Preference number: 6 (lower is better)
Translates to: PVGSFWSPAMWV*PFPFNDEETED
Trigger: ATCCTCAGTTTCCTCATCGTTAAATGGGAACGGCCACACCCACATCGCAGGACTCCAGAACGAGCCCACAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593331.1
ENST00000610351.1
CDS TCA 72 bp ACAGCTAGGTGTAGTGAGCCAGACGAGGCAGCTTACTaGACCTGGGGGTTCTCTCCATTGTCACCGCATTCT +
Preference number: 6 (lower is better)
Translates to: TARCSEPDEAAY*TWGFSPLSPHS
Trigger: AGAATGCGGTGACAATGGAGAGAACCCCCAGGTTCAGTAAGCTGCCTCGTCTGGCTCACTACACCTAGCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330915.7