RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KALRN (Homo sapiens)

Ensembl gene IDs: ENSG00000160145

Ensembl transcript IDs: ENST00000240874.7, ENST00000291478.9, ENST00000354186.8, ENST00000360013.7, ENST00000393496.5, ENST00000393501.5, ENST00000439170.2, ENST00000448253.6, ENST00000454902.1, ENST00000459915.2, ENST00000460856.5, ENST00000462213.2, ENST00000471431.1, ENST00000473056.1, ENST00000477496.5, ENST00000483658.1, ENST00000483658.2, ENST00000484224.6, ENST00000484542.1, ENST00000488825.5, ENST00000494648.1, ENST00000498499.1, ENST00000522553.6, ENST00000682277.1, ENST00000682290.1, ENST00000682363.1, ENST00000682506.1, ENST00000682540.1, ENST00000682575.1, ENST00000682625.1, ENST00000682636.1, ENST00000682674.1, ENST00000682695.1, ENST00000682861.1, ENST00000682890.1, ENST00000683124.1, ENST00000683146.1, ENST00000683280.1, ENST00000683356.1, ENST00000683428.1, ENST00000683512.1, ENST00000683571.1, ENST00000683592.1, ENST00000683827.1, ENST00000683922.1, ENST00000684186.1, ENST00000684276.1, ENST00000684360.1, ENST00000684374.1, ENST00000684382.1, ENST00000684410.1, ENST00000684441.1, ENST00000684480.1

Found 2303 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGACCTCTAGGGCAGCAGGAGCCTGGGCGTACCTGCTGTTCTGAGTaGGATCTGGGGGAAGTACATTGGGCCATTGGGCCTCTCACAGGT +
Preference number: 1 (lower is better)
Translates to: RPLGQQEPGRTCCSE*DLGEVHWAIGPLTG
Trigger: ACCTGTGAGAGGCCCAATGGCCCAATGTACTTCCCCCAGATCCCACTCAGAACAGCAGGTACGCCCAGGCTCCTGCTGCCCTAGAGGTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
3UTR GCA 90 bp CTGGGGGAAGTACATTGGGCCATTGGGCCTCTCACAGGTCCCTACTaGCCCACCATTTTAGACTTTGGAGAGAAGCTCAGCAACCTCGAA +
Preference number: 1 (lower is better)
Translates to: LGEVHWAIGPLTGPY*PTILDFGEKLSNLE
Trigger: TTCGAGGTTGCTGAGCTTCTCTCCAAAGTCTAAAATGGTGGGGCAGTAGGGACCTGTGAGAGGCCCAATGGCCCAATGTACTTCCCCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
3UTR GCA 90 bp GCTCCTTCCCTCTGTGCAACTGACCAGCCATCTGTTGGAAAGTCGTaGGCAGTTGCCTGCCTTTCATGGATGCTTCCATTGCCTGTTCAA +
Preference number: 1 (lower is better)
Translates to: APSLCATDQPSVGKS*AVACLSWMLPLPVQ
Trigger: TTGAACAGGCAATGGAAGCATCCATGAAAGGCAGGCAACTGCGCACGACTTTCCAACAGATGGCTGGTCAGTTGCACAGAGGGAAGGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483658.1
3UTR CCA 90 bp TACCCTCCTTGTCCCCCACCTGCCGTGGTCTGCACACCATTGTTCTaGGCCCTGGCCTTCTCAAGCAGAAACTCAACTTGTTATAAAAAC +
Preference number: 1 (lower is better)
Translates to: YPPCPPPAVVCTPLF*ALAFSSRNSTCYKN
Trigger: GTTTTTATAACAAGTTGAGTTTCTGCTTGAGAAGGCCAGGGCCCAGAACAATGGTGTGCAGACCACGGCAGGTGGGGGACAAGGAGGGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000291478.9
3UTR CCA 90 bp GACCAGCCATCTGTTGGAAAGTCGTGCGCAGTTGCCTGCCTTTCATaGATGCTTCCATTGCCTGTTCAACATACTCACTCTCCAGGCTTG +
Preference number: 1 (lower is better)
Translates to: DQPSVGKSCAVACLS*MLPLPVQHTHSPGL
Trigger: CAAGCCTGGAGAGTGAGTATGTTGAACAGGCAATGGAAGCATCCATGAAAGGCAGGCAACTGCGCACGACTTTCCAACAGATGGCTGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483658.1
3UTR GCA 90 bp AGCCATCTGTTGGAAAGTCGTGCGCAGTTGCCTGCCTTTCATGGATaGTTCCATTGCCTGTTCAACATACTCACTCTCCAGGCTTGCCAA +
Preference number: 1 (lower is better)
Translates to: SHLLESRAQLPAFHG*FHCLFNILTLQACQ
Trigger: TTGGCAAGCCTGGAGAGTGAGTATGTTGAACAGGCAATGGAAGCATCCATGAAAGGCAGGCAACTGCGCACGACTTTCCAACAGATGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483658.1
3UTR CCA 90 bp CATTGGGCCTCTCACAGGTCCCTACTGCCCCACCATTTTAGACTTTaGAGAGAAGCTCAGCAACCTCGAATTGCACCCAGTAGAGAAGAA +
Preference number: 1 (lower is better)
Translates to: HWASHRSLLPHHFRL*REAQQPRIAPSREE
Trigger: TTCTTCTCTACTGGGTGCAATTCGAGGTTGCTGAGCTTCTCTCCAAAGTCTAAAATGGTGGGGCAGTAGGGACCTGTGAGAGGCCCAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
3UTR CCA 90 bp TTGCTGTGGAGAACTCTTGAACCAAGACTACTCTCTTATCTCTGTTaGGAGGGACCAGGAGCTTTGCAGACAGGGAGCCTCCCTGTTAGT +
Preference number: 1 (lower is better)
Translates to: LLWRTLEPRLLSYLC*EGPGALQTGSLPVS
Trigger: ACTAACAGGGAGGCTCCCTGTCTGCAAAGCTCCTGGTCCCTCCCAACAGAGATAAGAGAGTAGTCTTGGTTCAAGAGTTCTCCACAGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291478.9
3UTR CCA 90 bp ACATCAGTCAGGTGGCCCAGGAGCAAGATGACATACAGGGAAGTTTaGAAGGAGAAGGAGAGAACTTGGAAGTTGGCTCAGAGCAAGCCT +
Preference number: 1 (lower is better)
Translates to: TSVRWPRSKMTYREV*KEKERTWKLAQSKP
Trigger: AGGCTTGCTCTGAGCCAACTTCCAAGTTCTCTCCTTCTCCTTCCAAACTTCCCTGTATGTCATCTTGCTCCTGGGCCACCTGACTGATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483658.1
3UTR GCA 90 bp CTCTTCTCACTTGGAATAACCTACAGTGAGGAAGGGGCTGCACTGTaGAAGGAGGAGCTTCCATTTTGCTTTCAGCGAGGAGACATTGCT +
Preference number: 1 (lower is better)
Translates to: LFSLGITYSEEGAAL*KEELPFCFQRGDIA
Trigger: AGCAATGTCTCCTCGCTGAAAGCAAAATGGAAGCTCCTCCTTGCACAGTGCAGCCCCTTCCTCACTGTAGGTTATTCCAAGTGAGAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483658.1
3UTR GCA 90 bp TTGGAAAGTCGTGCGCAGTTGCCTGCCTTTCATGGATGCTTCCATTaGCTGTTCAACATACTCACTCTCCAGGCTTGCCAAGAGTGTCTT +
Preference number: 1 (lower is better)
Translates to: LESRAQLPAFHGCFH*LFNILTLQACQECL
Trigger: AAGACACTCTTGGCAAGCCTGGAGAGTGAGTATGTTGAACAGGCAATGGAAGCATCCATGAAAGGCAGGCAACTGCGCACGACTTTCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483658.1
3UTR GCA 90 bp TGTGCAACTGACCAGCCATCTGTTGGAAAGTCGTGCGCAGTTGCCTaGCTTTCATGGATGCTTCCATTGCCTGTTCAACATACTCACTCT +
Preference number: 1 (lower is better)
Translates to: CATDQPSVGKSCAVA*LSWMLPLPVQHTHS
Trigger: AGAGTGAGTATGTTGAACAGGCAATGGAAGCATCCATGAAAGGCAGGCAACTGCGCACGACTTTCCAACAGATGGCTGGTCAGTTGCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483658.1
3UTR CCA 90 bp CTTGTCCCCCACCTGCCGTGGTCTGCACACCATTGTTCTGGGCCCTaGCCTTCTCAAGCAGAAACTCAACTTGTTATAAAAACTCAGAAT +
Preference number: 1 (lower is better)
Translates to: LVPHLPWSAHHCSGP*PSQAETQLVIKTQN
Trigger: ATTCTGAGTTTTTATAACAAGTTGAGTTTCTGCTTGAGAAGGCCAGGGCCCAGAACAATGGTGTGCAGACCACGGCAGGTGGGGGACAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000291478.9
3UTR GCA 90 bp AGGGGGATCTTGATTCAGGTCATCCACAGTGGACAGAACAGAACTTaGCAAGCTGGACTTTATGGATATTGGGAATCCTCAGAGCCTACA +
Preference number: 1 (lower is better)
Translates to: RGILIQVIHSGQNRT*QAGLYGYWESSEPT
Trigger: TGTAGGCTCTGAGGATTCCCAATATCCATAAAGTCCAGCTTGGCAAGTTCTGTTCTGTCCACTGTGGATGACCTGAATCAAGATCCCCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000291478.9
3UTR GCA 90 bp CCAGAAAATAGAGAGTTTGAAGCAACAGACACAGAAGAGTGGGTTTaGTCCCATGCTGCAGAAGGCATTTGCAGGACAGAATTCCCAGCT +
Preference number: 1 (lower is better)
Translates to: PENREFEATDTEEWV*SHAAEGICRTEFPA
Trigger: AGCTGGGAATTCTGTCCTGCAAATGCCTTCTGCAGCATGGGAGCAAACCCACTCTTCTGTGTCTGTTGCTTCAAACTCTCTATTTTCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483658.1
3UTR CCA 90 bp CTGGAAACACAAAAGCTGGCACAAGTGTCATTATCATGGAATCCATaGCTCCTTCCCTCTGTGCAACTGACCAGCCATCTGTTGGAAAGT +
Preference number: 1 (lower is better)
Translates to: LETQKLAQVSLSWNP*LLPSVQLTSHLLES
Trigger: ACTTTCCAACAGATGGCTGGTCAGTTGCACAGAGGGAAGGAGCCATGGATTCCATGATAATGACACTTGTGCCAGCTTTTGTGTTTCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483658.1
3UTR TCA 90 bp TCATCTGGGATTCCTTGTTATTTCCAACTTGCTGTGGAGAACTCTTaGACCAAGACTACTCTCTTATCTCTGTTGGGAGGGACCAGGAGC +
Preference number: 1 (lower is better)
Translates to: SSGIPCYFQLAVENS*TKTTLLSLLGGTRS
Trigger: GCTCCTGGTCCCTCCCAACAGAGATAAGAGAGTAGTCTTGGTTCAAGAGTTCTCCACAGCAAGTTGGAAATAACAAGGAATCCCAGATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291478.9
3UTR CCA 90 bp CTGGCCTTCTCAAGCAGAAACTCAACTTGTTATAAAAACTCAGAATaGCTCAGCAGGGGGATCTTGATTCAGGTCATCCACAGTGGACAG +
Preference number: 1 (lower is better)
Translates to: LAFSSRNSTCYKNSE*LSRGILIQVIHSGQ
Trigger: CTGTCCACTGTGGATGACCTGAATCAAGATCCCCCTGCTGAGCCATTCTGAGTTTTTATAACAAGTTGAGTTTCTGCTTGAGAAGGCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000291478.9
3UTR CCA 90 bp TCAAAACTTCTGGAAACACAAAAGCTGGCACAAGTGTCATTATCATaGAATCCATGGCTCCTTCCCTCTGTGCAACTGACCAGCCATCTG +
Preference number: 1 (lower is better)
Translates to: SKLLETQKLAQVSLS*NPWLLPSVQLTSHL
Trigger: CAGATGGCTGGTCAGTTGCACAGAGGGAAGGAGCCATGGATTCCATGATAATGACACTTGTGCCAGCTTTTGTGTTTCCAGAAGTTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483658.1
3UTR CCA 90 bp AGCAAGATGACATACAGGGAAGTTTGGAAGGAGAAGGAGAGAACTTaGAAGTTGGCTCAGAGCAAGCCTGTAGTGAGAACTATGAGCAAG +
Preference number: 1 (lower is better)
Translates to: SKMTYREVWKEKERT*KLAQSKPVVRTMSK
Trigger: CTTGCTCATAGTTCTCACTACAGGCTTGCTCTGAGCCAACTTCCAAGTTCTCTCCTTCTCCTTCCAAACTTCCCTGTATGTCATCTTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483658.1
3UTR TCA 90 bp ACTCAACTTGTTATAAAAACTCAGAATGGCTCAGCAGGGGGATCTTaGTTCAGGTCATCCACAGTGGACAGAACAGAACTTGCCAAGCTG +
Preference number: 1 (lower is better)
Translates to: TQLVIKTQNGSAGGS*FRSSTVDRTELAKL
Trigger: CAGCTTGGCAAGTTCTGTTCTGTCCACTGTGGATGACCTGAATCAAGATCCCCCTGCTGAGCCATTCTGAGTTTTTATAACAAGTTGAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000291478.9
3UTR TCA 90 bp AAATATCCAGGCATTAAACATCAGTCAGGTGGCCCAGGAGCAAGATaGCATACAGGGAAGTTTGGAAGGAGAAGGAGAGAACTTGGAAGT +
Preference number: 1 (lower is better)
Translates to: KYPGIKHQSGGPGAR*HTGKFGRRRRELGS
Trigger: ACTTCCAAGTTCTCTCCTTCTCCTTCCAAACTTCCCTGTATGTCATCTTGCTCCTGGGCCACCTGACTGATGTTTAATGCCTGGATATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483658.1
3UTR CCA 90 bp TGTATATATGAAATGGAATCATCATCTCTGCCTCTTGCCTTGGTGTaGGGTTTCCATGAAACTCTGTGTTTGGGGTTGGGGCTCTCTCTT +
Preference number: 1 (lower is better)
Translates to: CIYEMESSSLPLALV*GFHETLCLGLGLSL
Trigger: AAGAGAGAGCCCCAACCCCAAACACAGAGTTTCATGGAAACCCCACACCAAGGCAAGAGGCAGAGATGATGATTCCATTTCATATATACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
3UTR CCA 90 bp CAGTTTCCAGAAAATAGAGAGTTTGAAGCAACAGACACAGAAGAGTaGGTTTGCTCCCATGCTGCAGAAGGCATTTGCAGGACAGAATTC +
Preference number: 1 (lower is better)
Translates to: QFPENREFEATDTEE*VCSHAAEGICRTEF
Trigger: GAATTCTGTCCTGCAAATGCCTTCTGCAGCATGGGAGCAAACCCACTCTTCTGTGTCTGTTGCTTCAAACTCTCTATTTTCTGGAAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483658.1
3UTR TCA 90 bp CATTTAGAAGTCATGTTTACTCTTCTCACTTGGAATAACCTACAGTaGGGAAGGGGCTGCACTGTGCAAGGAGGAGCTTCCATTTTGCTT +
Preference number: 1 (lower is better)
Translates to: HLEVMFTLLTWNNLQ*GRGCTVQGGASILL
Trigger: AAGCAAAATGGAAGCTCCTCCTTGCACAGTGCAGCCCCTTCCTCACTGTAGGTTATTCCAAGTGAGAAGAGTAAACATGACTTCTAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483658.1
3UTR CCA 90 bp CAGGATCATCATCATCTGGGATTCCTTGTTATTTCCAACTTGCTGTaGAGAACTCTTGAACCAAGACTACTCTCTTATCTCTGTTGGGAG +
Preference number: 1 (lower is better)
Translates to: QDHHHLGFLVISNLL*RTLEPRLLSYLCWE
Trigger: CTCCCAACAGAGATAAGAGAGTAGTCTTGGTTCAAGAGTTCTCCACAGCAAGTTGGAAATAACAAGGAATCCCAGATGATGATGATCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291478.9
3UTR GCA 90 bp TTCCCCAGGATCATCATCATCTGGGATTCCTTGTTATTTCCAACTTaGTGTGGAGAACTCTTGAACCAAGACTACTCTCTTATCTCTGTT +
Preference number: 1 (lower is better)
Translates to: FPRIIIIWDSLLFPT*CGELLNQDYSLISV
Trigger: AACAGAGATAAGAGAGTAGTCTTGGTTCAAGAGTTCTCCACAGCAAGTTGGAAATAACAAGGAATCCCAGATGATGATGATCCTGGGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291478.9
3UTR TCA 90 bp CATAGTAACAGTCTCTGTAATACTCCAGAACATGGATTCAGTTGTTaGTGGAAGTCAGGTATTGATGGAAACTCATATGATGGCCATCCC +
Preference number: 1 (lower is better)
Translates to: HSNSLCNTPEHGFSC*WKSGIDGNSYDGHP
Trigger: GGGATGGCCATCATATGAGTTTCCATCAATACCTGACTTCCATCAACAACTGAATCCATGTTCTGGAGTATTACAGAGACTGTTACTATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291478.9
3UTR TCA 90 bp TGTGAGTTCTGCAGTAAATCCAAAACACAATGCTTCTTGCTACTCTaGATGACCACAGAAAAGGTTAGATTCAAGCTGGACTGTGAGCTA +
Preference number: 1 (lower is better)
Translates to: CEFCSKSKTQCFLLL*MTTEKVRFKLDCEL
Trigger: TAGCTCACAGTCCAGCTTGAATCTAACCTTTTCTGTGGTCATTCAGAGTAGCAAGAAGCATTGTGTTTTGGATTTACTGCAGAACTCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483658.1
3UTR TCA 90 bp ATACAGCAACAATGGTCAACTATTCGGCTCTTCTCCATTTCTTCATaGAGTCTTTACTTTCCCCTGGCAGTGCACAGAGATTTTATATGC +
Preference number: 1 (lower is better)
Translates to: IQQQWSTIRLFSISS*SLYFPLAVHRDFIC
Trigger: GCATATAAAATCTCTGTGCACTGCCAGGGGAAAGTAAAGACTTCATGAAGAAATGGAGAAGAGCCGAATAGTTGACCATTGTTGCTGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483658.1
3UTR-3UTR CCA 90 bp GGGGGAAGTACATTGGGCCATTGGGCCTCTCACAGGTCCCTACTGCCCCACCATCCGAGGGTGAGCCCATaGCCCAGGCGGGGAGATTTT +
Preference number: 2 (lower is better)
Translates to: GGSTLGHWASHRSLLPHHPRVSP*PRRGDF
Trigger: AAAATCTCCCCGCCTGGGCCATGGGCTCACCCTCGG...ATGGTGGGGCAGTAGGGACCTGTGAGAGGCCCAATGGCCCAATGTACTTCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
3UTR-3UTR CCA 90 bp GGCAGCAGGAGCCTGGGCGTACCTGCTGTTCTGAGTGGGATCTGGGGGAAGTACAGAGAGGTGGGTGATTaGAGTCCTGGTGGGAGGTCC +
Preference number: 2 (lower is better)
Translates to: GSRSLGVPAVLSGIWGKYREVGD*SPGGRS
Trigger: GGACCTCCCACCAGGACTCCAATCACCCACCTCTCT...GTACTTCCCCCAGATCCCACTCAGAACAGCAGGTACGCCCAGGCTCCTGCTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
3UTR-3UTR GCA 90 bp GGCAGCAGGAGCCTGGGCGTACCTGCTGTTCTGAGTGGGATCTGGGGGAAGTACCTCACAGGTCCCTACTaGCCCACCATTTTAGACTTT +
Preference number: 2 (lower is better)
Translates to: GSRSLGVPAVLSGIWGKYLTGPY*PTILDF
Trigger: AAAGTCTAAAATGGTGGGGCAGTAGGGACCTGTGAG...GTACTTCCCCCAGATCCCACTCAGAACAGCAGGTACGCCCAGGCTCCTGCTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
3UTR-3UTR CCA 90 bp GGGGGAAGTACATTGGGCCATTGGGCCTCTCACAGGTCCCTACTGCCCCACCATAAGTCTCAAGAGAGGTaGGTGATTGGAGTCCTGGTG +
Preference number: 2 (lower is better)
Translates to: GGSTLGHWASHRSLLPHHKSQER*VIGVLV
Trigger: CACCAGGACTCCAATCACCCACCTCTCTTGAGACTT...ATGGTGGGGCAGTAGGGACCTGTGAGAGGCCCAATGGCCCAATGTACTTCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
3UTR-3UTR CCA 90 bp GGGGGAAGTACATTGGGCCATTGGGCCTCTCACAGGTCCCTACTGCCCCACCATCGGGGAGATTTTGCTTaGAACATGTTGCCCTCTGAG +
Preference number: 2 (lower is better)
Translates to: GGSTLGHWASHRSLLPHHRGDFA*NMLPSE
Trigger: CTCAGAGGGCAACATGTTCCAAGCAAAATCTCCCCG...ATGGTGGGGCAGTAGGGACCTGTGAGAGGCCCAATGGCCCAATGTACTTCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
3UTR CAA 90 bp TGGAATCCATGGCTCCTTCCCTCTGTGCAACTGACCAGCCATCTGTaGGAAAGTCGTGCGCAGTTGCCTGCCTTTCATGGATGCTTCCAT +
Preference number: 2 (lower is better)
Translates to: WNPWLLPSVQLTSHL*ESRAQLPAFHGCFH
Trigger: ATGGAAGCATCCATGAAAGGCAGGCAACTGCGCACGACTTTCCAACAGATGGCTGGTCAGTTGCACAGAGGGAAGGAGCCATGGATTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483658.1
3UTR-3UTR TCA 90 bp GGCAGGCTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGCACTGCACGTCTATGTaGAACCATAGGGGCTGGGAG +
Preference number: 2 (lower is better)
Translates to: GRLSFQNNSELPVNLRGAHCTSM*NHRGWE
Trigger: CTCCCAGCCCCTATGGTTTCACATAGACGTGCAGTG...CGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAGCCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
3UTR-3UTR GCA 90 bp ATGTGCGATGGTCCCTATGGGGAAACCTGTCCACTTATGAATAAGGCCCTTTGTCCACCTGCCGTGGTCTaGACACCATTGTTCTGGGCC +
Preference number: 2 (lower is better)
Translates to: MCDGPYGETCPLMNKALCPPAVV*TPLFWA
Trigger: GGCCCAGAACAATGGTGTGCAGACCACGGCAGGTGG...ACAAAGGGCCTTATTCATAAGTGGACAGGTTTCCCCATAGGGACCATCGCACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291478.9
3UTR CAA 90 bp CAAAAATACCCTCCTTGTCCCCCACCTGCCGTGGTCTGCACACCATaGTTCTGGGCCCTGGCCTTCTCAAGCAGAAACTCAACTTGTTAT +
Preference number: 2 (lower is better)
Translates to: QKYPPCPPPAVVCTP*FWALAFSSRNSTCY
Trigger: ATAACAAGTTGAGTTTCTGCTTGAGAAGGCCAGGGCCCAGAACAATGGTGTGCAGACCACGGCAGGTGGGGGACAAGGAGGGTATTTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000291478.9
3UTR CAA 90 bp CCCTCTGTGCAACTGACCAGCCATCTGTTGGAAAGTCGTGCGCAGTaGCCTGCCTTTCATGGATGCTTCCATTGCCTGTTCAACATACTC +
Preference number: 2 (lower is better)
Translates to: PSVQLTSHLLESRAQ*PAFHGCFHCLFNIL
Trigger: GAGTATGTTGAACAGGCAATGGAAGCATCCATGAAAGGCAGGCAACTGCGCACGACTTTCCAACAGATGGCTGGTCAGTTGCACAGAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483658.1
3UTR-3UTR CCA 90 bp CCCCATAACCCAGCCAGGGAAATAAGCCCAACTTCAGGACCTCTCAGAAATCAGCTCTGTGTTTGGGGTTaGGGCTCTCTCTTGAGTGTG +
Preference number: 2 (lower is better)
Translates to: PHNPAREISPTSGPLRNQLCVWG*GSLLSV
Trigger: CACACTCAAGAGAGAGCCCCAACCCCAAACACAGAG...CTGATTTCTGAGAGGTCCTGAAGTTGGGCTTATTTCCCTGGCTGGGTTATGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
3UTR CAA 90 bp GTTGGAAAGTCGTGCGCAGTTGCCTGCCTTTCATGGATGCTTCCATaGCCTGTTCAACATACTCACTCTCCAGGCTTGCCAAGAGTGTCT +
Preference number: 2 (lower is better)
Translates to: VGKSCAVACLSWMLP*PVQHTHSPGLPRVS
Trigger: AGACACTCTTGGCAAGCCTGGAGAGTGAGTATGTTGAACAGGCAATGGAAGCATCCATGAAAGGCAGGCAACTGCGCACGACTTTCCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483658.1
3UTR-3UTR TCA 90 bp TACAAAGACAGTCCTTTCCTGAGCCAGGTGCAATTCCAGAGAATGACACTTTGCCTCAAGAGAGGTGGGTaGTTGGAGTCCTGGTGGGAG +
Preference number: 2 (lower is better)
Translates to: YKDSPFLSQVQFQRMTLCLKRGG*LESWWE
Trigger: CTCCCACCAGGACTCCAATCACCCACCTCTCTTGAG...GCAAAGTGTCATTCTCTGGAATTGCACCTGGCTCAGGAAAGGACTGTCTTTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
3UTR-3UTR TCA 90 bp ATTCAGGTCATCCACAGTGGACAGAACAGAACTTGCCAAGCTGGACTTTATGGAAGACCTCTGAGGGAGTaGGGCTTTATGACCCAGGGC +
Preference number: 2 (lower is better)
Translates to: IQVIHSGQNRTCQAGLYGRPLRE*GFMTQG
Trigger: GCCCTGGGTCATAAAGCCTCACTCCCTCAGAGGTCT...TCCATAAAGTCCAGCTTGGCAAGTTCTGTTCTGTCCACTGTGGATGACCTGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291478.9
3UTR-3UTR TCA 90 bp GCTCCCATGCTGCAGAAGGCATTTGCAGGACAGAATTCCCAGCTCTATTCTAGATGGAATAACCTACAGTaGGGAAGGGGCTGCACTGTG +
Preference number: 2 (lower is better)
Translates to: APMLQKAFAGQNSQLYSRWNNLQ*GRGCTV
Trigger: CACAGTGCAGCCCCTTCCTCACTGTAGGTTATTCCA...TCTAGAATAGAGCTGGGAATTCTGTCCTGCAAATGCCTTCTGCAGCATGGGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483658.1
3UTR-3UTR GCA 90 bp TACAAAGACAGTCCTTTCCTGAGCCAGGTGCAATTCCAGAGAATGACACTTTGCGCTAACCCGGTGAGCTaGAGGGACAAGTCCCAGGAT +
Preference number: 2 (lower is better)
Translates to: YKDSPFLSQVQFQRMTLCANPVS*RDKSQD
Trigger: ATCCTGGGACTTGTCCCTGCAGCTCACCGGGTTAGC...GCAAAGTGTCATTCTCTGGAATTGCACCTGGCTCAGGAAAGGACTGTCTTTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
3UTR-3UTR CCA 90 bp AAACTCTGTGTTTGGGGTTGGGGCTCTCTCTTGAGTGTGTTGGAAACTGGAGGAAGTACATTGGGCCATTaGGCCTCTCACAGGTCCCTA +
Preference number: 2 (lower is better)
Translates to: KLCVWGWGSLLSVLETGGSTLGH*ASHRSL
Trigger: TAGGGACCTGTGAGAGGCCCAATGGCCCAATGTACT...TCCTCCAGTTTCCAACACACTCAAGAGAGAGCCCCAACCCCAAACACAGAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
3UTR-3UTR CCA 90 bp CCCCATAACCCAGCCAGGGAAATAAGCCCAACTTCAGGACCTCTCAGAAATCAGCTCTGCCTCTTGCCTTaGTGTGGGGTTTCCATGAAA +
Preference number: 2 (lower is better)
Translates to: PHNPAREISPTSGPLRNQLCLLP*CGVSMK
Trigger: TTTCATGGAAACCCCACACCAAGGCAAGAGGCAGAG...CTGATTTCTGAGAGGTCCTGAAGTTGGGCTTATTTCCCTGGCTGGGTTATGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
3UTR CAA 90 bp CTAGGTCCCTCCTTTCCTGTCTTCTCACTTCCCAAATATGTGTACTaGGGGGAATTCCATGCAACCCCACATCTGGATCCTCCCAACTCT +
Preference number: 2 (lower is better)
Translates to: LGPSFPVFSLPKYVY*GEFHATPHLDPPNS
Trigger: AGAGTTGGGAGGATCCAGATGTGGGGTTGCATGGAATTCCCCCAAGTACACATATTTGGGAAGTGAGAAGACAGGAAAGGAGGGACCTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291478.9
3UTR-3UTR TCA 90 bp GCTCCCATGCTGCAGAAGGCATTTGCAGGACAGAATTCCCAGCTCTATTCTAGAGACAGATGTTGCAACTaGGTCAACAGTGACTTGGCC +
Preference number: 2 (lower is better)
Translates to: APMLQKAFAGQNSQLYSRDRCCN*VNSDLA
Trigger: GGCCAAGTCACTGTTGACTCAGTTGCAACATCTGTC...TCTAGAATAGAGCTGGGAATTCTGTCCTGCAAATGCCTTCTGCAGCATGGGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483658.1
3UTR-3UTR GCA 90 bp ATGTGCGATGGTCCCTATGGGGAAACCTGTCCACTTATGAATAAGGCCCTTTGTCTTGGGGGAATTCCATaGAACCCCACATCTGGATCC +
Preference number: 2 (lower is better)
Translates to: MCDGPYGETCPLMNKALCLGGIP*NPTSGS
Trigger: GGATCCAGATGTGGGGTTGCATGGAATTCCCCCAAG...ACAAAGGGCCTTATTCATAAGTGGACAGGTTTCCCCATAGGGACCATCGCACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000291478.9
3UTR-3UTR GCA 90 bp TGGGTTTGCTCCCATGCTGCAGAAGGCATTTGCAGGACAGAATTCCCAGCTCTAGGCAGCAGCACCATCTaGATTTATACTGCCACCTTT +
Preference number: 2 (lower is better)
Translates to: WVCSHAAEGICRTEFPALGSSTI*IYTATF
Trigger: AAAGGTGGCAGTATAAATGCAGATGGTGCTGCTGCC...TAGAGCTGGGAATTCTGTCCTGCAAATGCCTTCTGCAGCATGGGAGCAAACCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483658.1
3UTR-3UTR CCA 90 bp GCCAGTGTTTGGGAAAGGCTAAAGTTAACCCTCATCTTCTCTACCACACATCATAGAGAGGTGGGTGATTaGAGTCCTGGTGGGAGGTCC +
Preference number: 2 (lower is better)
Translates to: ASVWERLKLTLIFSTTHHREVGD*SPGGRS
Trigger: GGACCTCCCACCAGGACTCCAATCACCCACCTCTCT...ATGATGTGTGGTAGAGAAGATGAGGGTTAACTTTAGCCTTTCCCAAACACTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
3UTR-3UTR CCA 90 bp GCTCCCATGCTGCAGAAGGCATTTGCAGGACAGAATTCCCAGCTCTATTCTAGAGAGTCAACAGTGACTTaGCCAAGGCTTGGTCATGCA +
Preference number: 2 (lower is better)
Translates to: APMLQKAFAGQNSQLYSRESTVT*PRLGHA
Trigger: TGCATGACCAAGCCTTGGCCAAGTCACTGTTGACTC...TCTAGAATAGAGCTGGGAATTCTGTCCTGCAAATGCCTTCTGCAGCATGGGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483658.1
3UTR CAA 90 bp CAGGGGGATCTTGATTCAGGTCATCCACAGTGGACAGAACAGAACTaGCCAAGCTGGACTTTATGGATATTGGGAATCCTCAGAGCCTAC +
Preference number: 2 (lower is better)
Translates to: QGDLDSGHPQWTEQN*PSWTLWILGILRAY
Trigger: GTAGGCTCTGAGGATTCCCAATATCCATAAAGTCCAGCTTGGCAAGTTCTGTTCTGTCCACTGTGGATGACCTGAATCAAGATCCCCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000291478.9
3UTR-3UTR TCA 90 bp GGCAGGCTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGACCCTGAATAACCACTaGCGAGGTTTAAGAGGTACA +
Preference number: 2 (lower is better)
Translates to: GRLSFQNNSELPVNLRGATLNNH*RGLRGT
Trigger: TGTACCTCTTAAACCTCGTCAGTGGTTATTCAGGGT...CGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAGCCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
3UTR-3UTR CCA 90 bp GCCAGTGTTTGGGAAAGGCTAAAGTTAACCCTCATCTTCTCTACCACACATCATCTGGGGGAAGTACATTaGGCCATTGGGCCTCTCACA +
Preference number: 2 (lower is better)
Translates to: ASVWERLKLTLIFSTTHHLGEVH*AIGPLT
Trigger: TGTGAGAGGCCCAATGGCCCAATGTACTTCCCCCAG...ATGATGTGTGGTAGAGAAGATGAGGGTTAACTTTAGCCTTTCCCAAACACTGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
3UTR-3UTR CCA 90 bp AAGCAACAGACACAGAAGAGTGGGTTTGCTCCCATGCTGCAGAAGGCATTTGCAGTTGCCTGCCTTTCATaGATGCTTCCATTGCCTGTT +
Preference number: 2 (lower is better)
Translates to: KQQTQKSGFAPMLQKAFAVACLS*MLPLPV
Trigger: AACAGGCAATGGAAGCATCCATGAAAGGCAGGCAAC...TGCAAATGCCTTCTGCAGCATGGGAGCAAACCCACTCTTCTGTGTCTGTTGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483658.1
3UTR-3UTR CCA 90 bp TGGGTTTGCTCCCATGCTGCAGAAGGCATTTGCAGGACAGAATTCCCAGCTCTATTATCATGGAATCCATaGCTCCTTCCCTCTGTGCAA +
Preference number: 2 (lower is better)
Translates to: WVCSHAAEGICRTEFPALLSWNP*LLPSVQ
Trigger: TTGCACAGAGGGAAGGAGCCATGGATTCCATGATAA...TAGAGCTGGGAATTCTGTCCTGCAAATGCCTTCTGCAGCATGGGAGCAAACCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483658.1
3UTR-3UTR TCA 90 bp TACAAAGACAGTCCTTTCCTGAGCCAGGTGCAATTCCAGAGAATGACACTTTGCGGTGTGGGGTTTCCATaGAACTCTGTGTTTGGGGTT +
Preference number: 2 (lower is better)
Translates to: YKDSPFLSQVQFQRMTLCGVGFP*NSVFGV
Trigger: AACCCCAAACACAGAGTTTCATGGAAACCCCACACC...GCAAAGTGTCATTCTCTGGAATTGCACCTGGCTCAGGAAAGGACTGTCTTTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
3UTR-3UTR TCA 90 bp TCAGGTATTGATGGAAACTCATATGATGGCCATCCCTGGGCCAACAAATTAGCTTCAGCAGGGGGATCTTaGTTCAGGTCATCCACAGTG +
Preference number: 2 (lower is better)
Translates to: SGIDGNSYDGHPWANKLASAGGS*FRSSTV
Trigger: CACTGTGGATGACCTGAATCAAGATCCCCCTGCTGA...AGCTAATTTGTTGGCCCAGGGATGGCCATCATATGAGTTTCCATCAATACCTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000291478.9
3UTR-3UTR GCA 90 bp GCCAGTGTTTGGGAAAGGCTAAAGTTAACCCTCATCTTCTCTACCACACATCATCAGGCGGGGAGATTTTaGTTGGAACATGTTGCCCTC +
Preference number: 2 (lower is better)
Translates to: ASVWERLKLTLIFSTTHHQAGRF*LEHVAL
Trigger: GAGGGCAACATGTTCCAAGCAAAATCTCCCCGCCTG...ATGATGTGTGGTAGAGAAGATGAGGGTTAACTTTAGCCTTTCCCAAACACTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
3UTR-3UTR GCA 90 bp AAGGAAGAAGGTCTACATTCCTCGAAACTCATCCAGCACAATTCATTGACCATATCCTTGTCCCCCACCTaGCGTGGTCTGCACACCATT +
Preference number: 2 (lower is better)
Translates to: KEEGLHSSKLIQHNSLTISLSPT*RGLHTI
Trigger: AATGGTGTGCAGACCACGGCAGGTGGGGGACAAGGA...TATGGTCAATGAATTGTGCTGGATGAGTTTCGAGGAATGTAGACCTTCTTCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000291478.9
3UTR-3UTR GCA 90 bp AAGCAACAGACACAGAAGAGTGGGTTTGCTCCCATGCTGCAGAAGGCATTTGCACACCTAGACTTTCAATaGCTCATTAGGAAGACTGGG +
Preference number: 2 (lower is better)
Translates to: KQQTQKSGFAPMLQKAFAHLDFQ*LIRKTG
Trigger: CCCAGTCTTCCTAATGAGGCATTGAAAGTCTAGGTG...TGCAAATGCCTTCTGCAGCATGGGAGCAAACCCACTCTTCTGTGTCTGTTGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483658.1
3UTR-3UTR GCA 90 bp AGTAAACATTGGGAATTCAGAGTGCTAGAAGGAGGTACTGGTGTCATCTCCATCGAAGGGGCTGCACTGTaGAAGGAGGAGCTTCCATTT +
Preference number: 2 (lower is better)
Translates to: SKHWEFRVLEGGTGVISIEGAAL*KEELPF
Trigger: AAATGGAAGCTCCTCCTTGCACAGTGCAGCCCCTTC...GATGGAGATGACACCAGTACCTCCTTCTAGCACTCTGAATTCCCAATGTTTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483658.1
3UTR-3UTR CCA 90 bp GCCAGTGTTTGGGAAAGGCTAAAGTTAACCCTCATCTTCTCTACCACACATCATAGTACATTGGGCCATTaGGCCTCTCACAGGTCCCTA +
Preference number: 2 (lower is better)
Translates to: ASVWERLKLTLIFSTTHHSTLGH*ASHRSL
Trigger: TAGGGACCTGTGAGAGGCCCAATGGCCCAATGTACT...ATGATGTGTGGTAGAGAAGATGAGGGTTAACTTTAGCCTTTCCCAAACACTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
3UTR-3UTR CCA 90 bp GCCAGTGTTTGGGAAAGGCTAAAGTTAACCCTCATCTTCTCTACCACACATCATGTTCTGAGTGGGATCTaGGGGAAGTACATTGGGCCA +
Preference number: 2 (lower is better)
Translates to: ASVWERLKLTLIFSTTHHVLSGI*GKYIGP
Trigger: TGGCCCAATGTACTTCCCCCAGATCCCACTCAGAAC...ATGATGTGTGGTAGAGAAGATGAGGGTTAACTTTAGCCTTTCCCAAACACTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
3UTR-3UTR CCA 90 bp TACAAAGACAGTCCTTTCCTGAGCCAGGTGCAATTCCAGAGAATGACACTTTGCACCTGCTGTTCTGAGTaGGATCTGGGGGAAGTACAT +
Preference number: 2 (lower is better)
Translates to: YKDSPFLSQVQFQRMTLCTCCSE*DLGEVH
Trigger: ATGTACTTCCCCCAGATCCCACTCAGAACAGCAGGT...GCAAAGTGTCATTCTCTGGAATTGCACCTGGCTCAGGAAAGGACTGTCTTTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
3UTR-3UTR CCA 90 bp TACAAAGACAGTCCTTTCCTGAGCCAGGTGCAATTCCAGAGAATGACACTTTGCCCTCTTGCCTTGGTGTaGGGTTTCCATGAAACTCTG +
Preference number: 2 (lower is better)
Translates to: YKDSPFLSQVQFQRMTLCPLALV*GFHETL
Trigger: CAGAGTTTCATGGAAACCCCACACCAAGGCAAGAGG...GCAAAGTGTCATTCTCTGGAATTGCACCTGGCTCAGGAAAGGACTGTCTTTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
3UTR-3UTR TCA 90 bp CAGCAATTCTCAGTCATGCAAATGCCCGTGTTAAAGTTCTCCATTGGATTTAAAGACCTCGGGAGGGAGTaGGGTTATGGAGGAGCTAGA +
Preference number: 2 (lower is better)
Translates to: QQFSVMQMPVLKFSIGFKDLGRE*GYGGAR
Trigger: TCTAGCTCCTCCATAACCTCACTCCCTCCCGAGGTC...TTTAAATCCAATGGAGAACTTTAACACGGGCATTTGCATGACTGAGAATTGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
3UTR-3UTR TCA 90 bp GTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACCAGGCCTTCACTGCACGTCTATGTaGAACCATAGGGGCTGGGAG +
Preference number: 2 (lower is better)
Translates to: VMYQVLFHGFKKDLEPGLHCTSM*NHRGWE
Trigger: CTCCCAGCCCCTATGGTTTCACATAGACGTGCAGTG...AAGGCCTGGTTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
3UTR-3UTR TCA 90 bp TGGTGTCATCTCCATCATGGGCCTCCTCTCACTCATGAAGAAGTACTTAATGTCGGGGCCAAAAGAAGTTaGGTTCCAAGTTCCTTCCAA +
Preference number: 2 (lower is better)
Translates to: WCHLHHGPPLTHEEVLNVGAKRS*VPSSFQ
Trigger: TTGGAAGGAACTTGGAACTCAACTTCTTTTGGCCCC...GACATTAAGTACTTCTTCATGAGTGAGAGGAGGCCCATGATGGAGATGACACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483658.1
3UTR-3UTR TCA 90 bp AGCTGGCACAAGTGTCATTATCATGGAATCCATGGCTCCTTCCCTCTGTGCAACTTCACTTCCTACACATaGAGATGCATTCAGTCATCC +
Preference number: 2 (lower is better)
Translates to: SWHKCHYHGIHGSFPLCNFTSYT*RCIQSS
Trigger: GGATGACTGAATGCATCTTCATGTGTAGGAAGTGAA...GTTGCACAGAGGGAAGGAGCCATGGATTCCATGATAATGACACTTGTGCCAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483658.1
3UTR-3UTR GCA 90 bp CAGCAATTCTCAGTCATGCAAATGCCCGTGTTAAAGTTCTCCATTGGATTTAAAGAGCCTGGGCGTACCTaGTGTTCTGAGTGGGATCTG +
Preference number: 2 (lower is better)
Translates to: QQFSVMQMPVLKFSIGFKEPGRT*CSEWDL
Trigger: CAGATCCCACTCAGAACAGCAGGTACGCCCAGGCTC...TTTAAATCCAATGGAGAACTTTAACACGGGCATTTGCATGACTGAGAATTGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
3UTR-3UTR CCA 90 bp GCCAGTGTTTGGGAAAGGCTAAAGTTAACCCTCATCTTCTCTACCACACATCATACCTGCTGTTCTGAGTaGGATCTGGGGGAAGTACAT +
Preference number: 2 (lower is better)
Translates to: ASVWERLKLTLIFSTTHHTCCSE*DLGEVH
Trigger: ATGTACTTCCCCCAGATCCCACTCAGAACAGCAGGT...ATGATGTGTGGTAGAGAAGATGAGGGTTAACTTTAGCCTTTCCCAAACACTGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
3UTR-3UTR CCA 90 bp CCCAGGATCATCATCATCTGGGATTCCTTGTTATTTCCAACTTGCTGTGGAGAAATGCAACCCCACATCTaGATCCTCCCAACTCTGTTG +
Preference number: 2 (lower is better)
Translates to: PRIIIIWDSLLFPTCCGEMQPHI*ILPTLL
Trigger: CAACAGAGTTGGGAGGATCCAGATGTGGGGTTGCAT...TTCTCCACAGCAAGTTGGAAATAACAAGGAATCCCAGATGATGATGATCCTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291478.9
3UTR CAA 90 bp ATCATCTGGGATTCCTTGTTATTTCCAACTTGCTGTGGAGAACTCTaGAACCAAGACTACTCTCTTATCTCTGTTGGGAGGGACCAGGAG +
Preference number: 2 (lower is better)
Translates to: IIWDSLLFPTCCGEL*NQDYSLISVGRDQE
Trigger: CTCCTGGTCCCTCCCAACAGAGATAAGAGAGTAGTCTTGGTTCAAGAGTTCTCCACAGCAAGTTGGAAATAACAAGGAATCCCAGATGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291478.9
3UTR-3UTR TCA 90 bp GTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACCAGGCCTTCTGCTGCTCAGACCCTaGATAACCACTGACGAGGTT +
Preference number: 2 (lower is better)
Translates to: VMYQVLFHGFKKDLEPGLLLLRP*ITTDEV
Trigger: AACCTCGTCAGTGGTTATTCAGGGTCTGAGCAGCAG...AAGGCCTGGTTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
3UTR-3UTR TCA 90 bp CTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTCATCCCCTTGATTTAGGGTaGCTTTTACTGCTGCTCAGA +
Preference number: 2 (lower is better)
Translates to: LSFQNNSELPVNLRGAFHPLDLG*LLLLLR
Trigger: TCTGAGCAGCAGTAAAAGTCACCCTAAATCAAGGGG...ATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
3UTR-3UTR TCA 90 bp CAAAACTTCTGGAAACACAAAAGCTGGCACAAGTGTCATTATCATGGAATCCATTCTGGACCCTGGGGCTaGTGCTCACATGAAACCTTC +
Preference number: 2 (lower is better)
Translates to: QNFWKHKSWHKCHYHGIHSGPWG*CSHETF
Trigger: GAAGGTTTCATGTGAGCATCAGCCCCAGGGTCCAGA...ATGGATTCCATGATAATGACACTTGTGCCAGCTTTTGTGTTTCCAGAAGTTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000483658.1
3UTR-3UTR GCA 90 bp GGCAGGCTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGACTTCTGTGACCCTTTaGCTCTTTATTTCTTCAGAA +
Preference number: 2 (lower is better)
Translates to: GRLSFQNNSELPVNLRGATSVTL*LFISSE
Trigger: TTCTGAAGAAATAAAGAGGCAAAGGGTCACAGAAGT...CGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAGCCTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
3UTR-3UTR CCA 90 bp ATCTTCAAAACTTCTGGAAACACAAAAGCTGGCACAAGTGTCATTATCATGGAACCCACACCTTCACACTaGCTCTCACTCCTGCCTCTC +
Preference number: 2 (lower is better)
Translates to: IFKTSGNTKAGTSVIIMEPTPSH*LSLLPL
Trigger: GAGAGGCAGGAGTGAGAGCCAGTGTGAAGGTGTGGG...TTCCATGATAATGACACTTGTGCCAGCTTTTGTGTTTCCAGAAGTTTTGAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483658.1
3UTR CAA 90 bp AACTCAACTTGTTATAAAAACTCAGAATGGCTCAGCAGGGGGATCTaGATTCAGGTCATCCACAGTGGACAGAACAGAACTTGCCAAGCT +
Preference number: 2 (lower is better)
Translates to: NSTCYKNSEWLSRGI*IQVIHSGQNRTCQA
Trigger: AGCTTGGCAAGTTCTGTTCTGTCCACTGTGGATGACCTGAATCAAGATCCCCCTGCTGAGCCATTCTGAGTTTTTATAACAAGTTGAGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000291478.9
3UTR-3UTR TCA 90 bp GCTCCCTCATATTCTCACAAATCTAAATTGCCATGCTCTTCCACAGAGGCAAGAAGCCAGCCAACTTTCTaGAAGATGGTATTCTACAGC +
Preference number: 2 (lower is better)
Translates to: APSYSHKSKLPCSSTEARSQPTF*KMVFYS
Trigger: GCTGTAGAATACCATCTTTCAGAAAGTTGGCTGGCT...TCTTGCCTCTGTGGAAGAGCATGGCAATTTAGATTTGTGAGAATATGAGGGAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291478.9
3UTR-3UTR TCA 90 bp TATACACCAGAAAGCAGCATTGGCCTCAAAGTACAATTAGTCCTTTTAGTTCAGTCAGCGGCTGCATGGTaGCAGGTATTGCAATCTCAG +
Preference number: 2 (lower is better)
Translates to: YTPESSIGLKVQLVLLVQSAAAW*QVLQSQ
Trigger: CTGAGATTGCAATACCTGTCACCATGCAGCCGCTGA...CTGAACTAAAAGGACTAATTGTACTTTGAGGCCAATGCTGCTTTCTGGTGTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
3UTR-3UTR TCA 90 bp CATCTGCATTTATACTGCCACCTTTTAGCCCTGGATCCAAGATTTATACAGCAATTCCCTCTGTGCAACTaGCCAGCCATCTGTTGGAAA +
Preference number: 2 (lower is better)
Translates to: HLHLYCHLLALDPRFIQQFPLCN*PAICWK
Trigger: TTTCCAACAGATGGCTGGTCAGTTGCACAGAGGGAA...TTGCTGTATAAATCTTGGATCCAGGGCTAAAAGGTGGCAGTATAAATGCAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483658.1
3UTR-3UTR GCA 90 bp CAAAACTTCTGGAAACACAAAAGCTGGCACAAGTGTCATTATCATGGAATCCATCTCACTCTCCAGGCTTaGCAAGAGTGTCTTCTGGAC +
Preference number: 2 (lower is better)
Translates to: QNFWKHKSWHKCHYHGIHLTLQA*QECLLD
Trigger: GTCCAGAAGACACTCTTGGCAAGCCTGGAGAGTGAG...ATGGATTCCATGATAATGACACTTGTGCCAGCTTTTGTGTTTCCAGAAGTTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483658.1
3UTR-3UTR CCA 90 bp GTAAAAGCTGATATGAAAGCTTGGGGTCTGTCTAACATTCTGTCAACTGCCCCCGGACTTTATGGATATTaGGAATCCTCAGAGCCTACA +
Preference number: 2 (lower is better)
Translates to: VKADMKAWGLSNILSTAPGLYGY*ESSEPT
Trigger: TGTAGGCTCTGAGGATTCCCAATATCCATAAAGTCC...GGGGGCAGTTGACAGAATGTTAGACAGACCCCAAGCTTTCATATCAGCTTTTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000291478.9
3UTR-3UTR CCA 90 bp TCAGGTATTGATGGAAACTCATATGATGGCCATCCCTGGGCCAACAAATTAGCTCCAAATATGTGTACTTaGGGGAATTCCATGCAACCC +
Preference number: 2 (lower is better)
Translates to: SGIDGNSYDGHPWANKLAPNMCT*GNSMQP
Trigger: GGGTTGCATGGAATTCCCCCAAGTACACATATTTGG...AGCTAATTTGTTGGCCCAGGGATGGCCATCATATGAGTTTCCATCAATACCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291478.9
3UTR-3UTR TCA 90 bp GTAAAAGCTGATATGAAAGCTTGGGGTCTGTCTAACATTCTGTCAACTGCCCCCGAGAACTGCACGGAGTaGAATGATGAACAGAATTAT +
Preference number: 2 (lower is better)
Translates to: VKADMKAWGLSNILSTAPENCTE*NDEQNY
Trigger: ATAATTCTGTTCATCATTTCACTCCGTGCAGTTCTC...GGGGGCAGTTGACAGAATGTTAGACAGACCCCAAGCTTTCATATCAGCTTTTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000291478.9
3UTR-3UTR TCA 90 bp GTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACCAGGCCTTCCCCTTGATTTAGGGTaGCTTTTACTGCTGCTCAGA +
Preference number: 2 (lower is better)
Translates to: VMYQVLFHGFKKDLEPGLPLDLG*LLLLLR
Trigger: TCTGAGCAGCAGTAAAAGTCACCCTAAATCAAGGGG...AAGGCCTGGTTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
3UTR-3UTR TCA 90 bp TCTGTTAGGGTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAAATTCTGAGCTGCCAGTaGATTTGCGGGGAGCGTTTC +
Preference number: 2 (lower is better)
Translates to: SVRVMYQVLFHGFKKDLEILSCQ*ICGERF
Trigger: GAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAAT...TTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCACCCTAACAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
3UTR-3UTR TCA 90 bp ATGTGCGATGGTCCCTATGGGGAAACCTGTCCACTTATGAATAAGGCCCTTTGTGCTAACCTCACTATCTaGAATAGCAGTTATCTAACT +
Preference number: 2 (lower is better)
Translates to: MCDGPYGETCPLMNKALCANLTI*NSSYLT
Trigger: AGTTAGATAACTGCTATTTCAGATAGTGAGGTTAGC...ACAAAGGGCCTTATTCATAAGTGGACAGGTTTCCCCATAGGGACCATCGCACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291478.9
3UTR-3UTR GCA 90 bp TCAGGTATTGATGGAAACTCATATGATGGCCATCCCTGGGCCAACAAATTAGCTCTCACAAATCTAAATTaGCATGCTCTTCCACAGAGG +
Preference number: 2 (lower is better)
Translates to: SGIDGNSYDGHPWANKLALTNLN*HALPQR
Trigger: CCTCTGTGGAAGAGCATGGCAATTTAGATTTGTGAG...AGCTAATTTGTTGGCCCAGGGATGGCCATCATATGAGTTTCCATCAATACCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291478.9
3UTR-3UTR GCA 90 bp TCAGGTATTGATGGAAACTCATATGATGGCCATCCCTGGGCCAACAAATTAGCTGGTGAGTTTGAACTTTaGCCTACTACAAAGACCTCT +
Preference number: 2 (lower is better)
Translates to: SGIDGNSYDGHPWANKLAGEFEL*PTTKTS
Trigger: AGAGGTCTTTGTAGTAGGGCAAAGTTCAAACTCACC...AGCTAATTTGTTGGCCCAGGGATGGCCATCATATGAGTTTCCATCAATACCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291478.9
3UTR-3UTR GCA 90 bp ATCTTCAAAACTTCTGGAAACACAAAAGCTGGCACAAGTGTCATTATCATGGAATCGTGCGCAGTTGCCTaGCTTTCATGGATGCTTCCA +
Preference number: 2 (lower is better)
Translates to: IFKTSGNTKAGTSVIIMESCAVA*LSWMLP
Trigger: TGGAAGCATCCATGAAAGGCAGGCAACTGCGCACGA...TTCCATGATAATGACACTTGTGCCAGCTTTTGTGTTTCCAGAAGTTTTGAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483658.1
3UTR-3UTR CCA 90 bp TCAGGTATTGATGGAAACTCATATGATGGCCATCCCTGGGCCAACAAATTAGCTAAACTCAAACATTCCTaGTCCCACCCCTATATTCAG +
Preference number: 2 (lower is better)
Translates to: SGIDGNSYDGHPWANKLAKLKHS*SHPYIQ
Trigger: CTGAATATAGGGGTGGGACCAGGAATGTTTGAGTTT...AGCTAATTTGTTGGCCCAGGGATGGCCATCATATGAGTTTCCATCAATACCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291478.9
3UTR CAA 90 bp CCTGGCAGGCTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTaGCGGGGAGCGTTTCATATACAGAAAGAACCTATCTTAATCAAA +
Preference number: 2 (lower is better)
Translates to: PGRLSFQNNSELPVN*RGAFHIQKEPILIK
Trigger: TTTGATTAAGATAGGTTCTTTCTGTATATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAGCCTGCCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
3UTR CAA 90 bp ATTCCCCAGGATCATCATCATCTGGGATTCCTTGTTATTTCCAACTaGCTGTGGAGAACTCTTGAACCAAGACTACTCTCTTATCTCTGT +
Preference number: 2 (lower is better)
Translates to: IPQDHHHLGFLVISN*LWRTLEPRLLSYLC
Trigger: ACAGAGATAAGAGAGTAGTCTTGGTTCAAGAGTTCTCCACAGCAAGTTGGAAATAACAAGGAATCCCAGATGATGATGATCCTGGGGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291478.9
3UTR-3UTR TCA 90 bp GTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACCAGGCCTTACCCTGAATAACCACTaGCGAGGTTTAAGAGGTACA +
Preference number: 2 (lower is better)
Translates to: VMYQVLFHGFKKDLEPGLTLNNH*RGLRGT
Trigger: TGTACCTCTTAAACCTCGTCAGTGGTTATTCAGGGT...AAGGCCTGGTTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
3UTR-3UTR TCA 90 bp AAGGAAGAAGGTCTACATTCCTCGAAACTCATCCAGCACAATTCATTGACCATATGGCTGAGAGAGACCTaGAGGATATCTCCAACATTA +
Preference number: 2 (lower is better)
Translates to: KEEGLHSSKLIQHNSLTIWLRET*RISPTL
Trigger: TAATGTTGGAGATATCCTTCAGGTCTCTCTCAGCCA...TATGGTCAATGAATTGTGCTGGATGAGTTTCGAGGAATGTAGACCTTCTTCCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291478.9
3UTR-3UTR TCA 90 bp CCAAGATTTATACAGCAACAATGGTCAACTATTCGGCTCTTCTCCATTTCTTCACCCAGCACCACTTATTaGAAAGGATGTCCTTTTCCC +
Preference number: 2 (lower is better)
Translates to: PRFIQQQWSTIRLFSISSPSTTY*KGCPFP
Trigger: GGGAAAAGGACATCCTTTTCAATAAGTGGTGCTGGG...TGAAGAAATGGAGAAGAGCCGAATAGTTGACCATTGTTGCTGTATAAATCTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483658.1
3UTR-3UTR GCA 90 bp CAGCAATTCTCAGTCATGCAAATGCCCGTGTTAAAGTTCTCCATTGGATTTAAACTCACAGGTCCCTACTaGCCCACCATTTTAGACTTT +
Preference number: 2 (lower is better)
Translates to: QQFSVMQMPVLKFSIGFKLTGPY*PTILDF
Trigger: AAAGTCTAAAATGGTGGGGCAGTAGGGACCTGTGAG...TTTAAATCCAATGGAGAACTTTAACACGGGCATTTGCATGACTGAGAATTGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
3UTR-3UTR GCA 90 bp ATCTTCAAAACTTCTGGAAACACAAAAGCTGGCACAAGTGTCATTATCATGGAAAAAGTCGTGCGCAGTTaGCTGCCTTTCATGGATGCT +
Preference number: 2 (lower is better)
Translates to: IFKTSGNTKAGTSVIIMEKVVRS*LPFMDA
Trigger: AGCATCCATGAAAGGCAGGCAACTGCGCACGACTTT...TTCCATGATAATGACACTTGTGCCAGCTTTTGTGTTTCCAGAAGTTTTGAAGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000483658.1
3UTR-3UTR CCA 90 bp CAGCAATTCTCAGTCATGCAAATGCCCGTGTTAAAGTTCTCCATTGGATTTAAAATGAAACTCTGTGTTTaGGGTTGGGGCTCTCTCTTG +
Preference number: 2 (lower is better)
Translates to: QQFSVMQMPVLKFSIGFKMKLCV*GWGSLL
Trigger: CAAGAGAGAGCCCCAACCCCAAACACAGAGTTTCAT...TTTAAATCCAATGGAGAACTTTAACACGGGCATTTGCATGACTGAGAATTGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
3UTR-3UTR CCA 90 bp TCAGGTCATCCACAGTGGACAGAACAGAACTTGCCAAGCTGGACTTTATGGATAGAAATCAGAAAGTGTTaGTACGTTGTTCATAGGAAC +
Preference number: 2 (lower is better)
Translates to: SGHPQWTEQNLPSWTLWIEIRKC*YVVHRN
Trigger: GTTCCTATGAACAACGTACCAACACTTTCTGATTTC...TATCCATAAAGTCCAGCTTGGCAAGTTCTGTTCTGTCCACTGTGGATGACCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291478.9
3UTR-3UTR CCA 90 bp ATGTGCGATGGTCCCTATGGGGAAACCTGTCCACTTATGAATAAGGCCCTTTGTCAACTTTCTGAAAGATaGTATTCTACAGCTGTAGAA +
Preference number: 2 (lower is better)
Translates to: MCDGPYGETCPLMNKALCQLSER*YSTAVE
Trigger: TTCTACAGCTGTAGAATACCATCTTTCAGAAAGTTG...ACAAAGGGCCTTATTCATAAGTGGACAGGTTTCCCCATAGGGACCATCGCACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291478.9
3UTR-3UTR CCA 90 bp ATCTTCAAAACTTCTGGAAACACAAAAGCTGGCACAAGTGTCATTATCATGGAAGCTAGAAGGAGGTACTaGTGTCATCTCCATCATGGG +
Preference number: 2 (lower is better)
Translates to: IFKTSGNTKAGTSVIIMEARRRY*CHLHHG
Trigger: CCCATGATGGAGATGACACCAGTACCTCCTTCTAGC...TTCCATGATAATGACACTTGTGCCAGCTTTTGTGTTTCCAGAAGTTTTGAAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483658.1
3UTR CAA 90 bp AAGGAAGAAGGTCTACATTCCTCGAAACTCATCCAGCACAATTCATaGACCATACTGAATAAGGACATGGTGAGTTTGAACTTTGCCCTA +
Preference number: 2 (lower is better)
Translates to: KEEGLHSSKLIQHNS*TILNKDMVSLNFAL
Trigger: TAGGGCAAAGTTCAAACTCACCATGTCCTTATTCAGTATGGTCAATGAATTGTGCTGGATGAGTTTCGAGGAATGTAGACCTTCTTCCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291478.9
3UTR-3UTR TCA 90 bp TCAGGTATTGATGGAAACTCATATGATGGCCATCCCTGGGCCAACAAATTAGCTATTATGGGTTGTCCCTaGTCTTTTCATTCTTTCTGT +
Preference number: 2 (lower is better)
Translates to: SGIDGNSYDGHPWANKLAIMGCP*SFHSFC
Trigger: ACAGAAAGAATGAAAAGATCAGGGACAACCCATAAT...AGCTAATTTGTTGGCCCAGGGATGGCCATCATATGAGTTTCCATCAATACCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291478.9
3UTR-3UTR TCA 90 bp ATCAATTGTTACAAGCCTGATGGAAGTATGTACTTATATGTATATGTGCGATGGTTCTGCCCTCCCAAGTaGAGAAAGTGGTTGTTGGGT +
Preference number: 2 (lower is better)
Translates to: INCYKPDGSMYLYVYVRWFCPPK*RKWLLG
Trigger: ACCCAACAACCACTTTCTTCACTTGGGAGGGCAGAA...CCATCGCACATATACATATAAGTACATACTTCCATCAGGCTTGTAACAATTGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291478.9
3UTR-3UTR GCA 90 bp TCAGGTATTGATGGAAACTCATATGATGGCCATCCCTGGGCCAACAAATTAGCTTTTACTCTTCGCATCTaGCATAAGAAATACTGGAGA +
Preference number: 2 (lower is better)
Translates to: SGIDGNSYDGHPWANKLAFTLRI*HKKYWR
Trigger: TCTCCAGTATTTCTTATGGCAGATGCGAAGAGTAAA...AGCTAATTTGTTGGCCCAGGGATGGCCATCATATGAGTTTCCATCAATACCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291478.9
3UTR-3UTR GCA 90 bp CAAAACTTCTGGAAACACAAAAGCTGGCACAAGTGTCATTATCATGGAATCCATGAGGAGCTTCCATTTTaGTTTCAGCGAGGAGACATT +
Preference number: 2 (lower is better)
Translates to: QNFWKHKSWHKCHYHGIHEELPF*FQRGDI
Trigger: AATGTCTCCTCGCTGAAAGCAAAATGGAAGCTCCTC...ATGGATTCCATGATAATGACACTTGTGCCAGCTTTTGTGTTTCCAGAAGTTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000483658.1
3UTR-3UTR GCA 90 bp GCAAATATCCAGGCATTAAACATCAGTCAGGTGGCCCAGGAGCAAGATGACATACTTCTTTCTTCTTTATaGAGATCCATGTTAGAACCT +
Preference number: 2 (lower is better)
Translates to: ANIQALNISQVAQEQDDILLSSL*RSMLEP
Trigger: AGGTTCTAACATGGATCTGCATAAAGAAGAAAGAAG...TATGTCATCTTGCTCCTGGGCCACCTGACTGATGTTTAATGCCTGGATATTTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483658.1
3UTR-3UTR CCA 90 bp AGCAGAAACTCAACTTGTTATAAAAACTCAGAATGGCTCAGCAGGGGGATCTTGACCAGAAAGCAGCATTaGCCTCAAAGTACAATTAGT +
Preference number: 2 (lower is better)
Translates to: SRNSTCYKNSEWLSRGILTRKQH*PQSTIS
Trigger: ACTAATTGTACTTTGAGGCCAATGCTGCTTTCTGGT...CAAGATCCCCCTGCTGAGCCATTCTGAGTTTTTATAACAAGTTGAGTTTCTGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000291478.9
3UTR-3UTR CCA 90 bp CATCTGCATTTATACTGCCACCTTTTAGCCCTGGATCCAAGATTTATACAGCAAACATACAGGGAAGTTTaGAAGGAGAAGGAGAGAACT +
Preference number: 2 (lower is better)
Translates to: HLHLYCHLLALDPRFIQQTYREV*KEKERT
Trigger: AGTTCTCTCCTTCTCCTTCCAAACTTCCCTGTATGT...TTGCTGTATAAATCTTGGATCCAGGGCTAAAAGGTGGCAGTATAAATGCAGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483658.1
3UTR-3UTR TCA 90 bp GTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACCAGGCCTTAGCTCATACTGTATTTaGATTTATTTCCTGGCAGGC +
Preference number: 2 (lower is better)
Translates to: VMYQVLFHGFKKDLEPGLSSYCI*IYFLAG
Trigger: GCCTGCCAGGAAATAAATTCAAATACAGTATGAGCT...AAGGCCTGGTTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
3UTR-3UTR TCA 90 bp CCAAGATTTATACAGCAACAATGGTCAACTATTCGGCTCTTCTCCATTTCTTCATGCTTCTTGCTACTCTaGATGACCACAGAAAAGGTT +
Preference number: 2 (lower is better)
Translates to: PRFIQQQWSTIRLFSISSCFLLL*MTTEKV
Trigger: AACCTTTTCTGTGGTCATTCAGAGTAGCAAGAAGCA...TGAAGAAATGGAGAAGAGCCGAATAGTTGACCATTGTTGCTGTATAAATCTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483658.1
3UTR-3UTR GCA 90 bp AGCAGAAACTCAACTTGTTATAAAAACTCAGAATGGCTCAGCAGGGGGATCTTGCATGGTGACAGGTATTaGAATCTCAGTTACAACTTA +
Preference number: 2 (lower is better)
Translates to: SRNSTCYKNSEWLSRGILHGDRY*NLSYNL
Trigger: TAAGTTGTAACTGAGATTGCAATACCTGTCACCATG...CAAGATCCCCCTGCTGAGCCATTCTGAGTTTTTATAACAAGTTGAGTTTCTGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000291478.9
3UTR-3UTR GCA 90 bp ATCAATTGTTACAAGCCTGATGGAAGTATGTACTTATATGTATATGTGCGATGGAGAACTATCAGCGGCTaGATGGTGACAGGTATTGCA +
Preference number: 2 (lower is better)
Translates to: INCYKPDGSMYLYVYVRWRTISG*MVTGIA
Trigger: TGCAATACCTGTCACCATGCAGCCGCTGATAGTTCT...CCATCGCACATATACATATAAGTACATACTTCCATCAGGCTTGTAACAATTGAT
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291478.9
3UTR-3UTR CCA 90 bp ATCAATTGTTACAAGCCTGATGGAAGTATGTACTTATATGTATATGTGCGATGGTATGATGGCCATCCCTaGGCCAACAAATTAGCTTGG +
Preference number: 2 (lower is better)
Translates to: INCYKPDGSMYLYVYVRWYDGHP*ANKLAW
Trigger: CCAAGCTAATTTGTTGGCCCAGGGATGGCCATCATA...CCATCGCACATATACATATAAGTACATACTTCCATCAGGCTTGTAACAATTGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291478.9
3UTR CAA 90 bp TTGGTTAAACTAAGCCTCAGGAGTTGGCATTCCAAGAATTGTTATTaGCATTTCTTCTACCATGCTTCCTTTTCTCAGCTAACCTCACTA +
Preference number: 2 (lower is better)
Translates to: LVKLSLRSWHSKNCY*HFFYHASFSQLTSL
Trigger: TAGTGAGGTTAGCTGAGAAAAGGAAGCATGGTAGAAGAAATGCAAATAACAATTCTTGGAATGCCAACTCCTGAGGCTTAGTTTAACCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291478.9
3UTR-3UTR TCA 90 bp TATACACCAGAAAGCAGCATTGGCCTCAAAGTACAATTAGTCCTTTTAGTTCAGGAGAACTGCACGGAGTaGAATGATGAACAGAATTAT +
Preference number: 2 (lower is better)
Translates to: YTPESSIGLKVQLVLLVQENCTE*NDEQNY
Trigger: ATAATTCTGTTCATCATTTCACTCCGTGCAGTTCTC...CTGAACTAAAAGGACTAATTGTACTTTGAGGCCAATGCTGCTTTCTGGTGTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
3UTR-3UTR TCA 90 bp TTGACCATACTGAATAAGGACATGGTGAGTTTGAACTTTGCCCTACTACAAAGAAGTTCACTCCCACTGTaGACTACCATCATAATGATA +
Preference number: 2 (lower is better)
Translates to: LTILNKDMVSLNFALLQRSSLPL*TTIIMI
Trigger: TATCATTATGATGGTAGTTCACAGTGGGAGTGAACT...TCTTTGTAGTAGGGCAAAGTTCAAACTCACCATGTCCTTATTCAGTATGGTCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291478.9
3UTR-3UTR GCA 90 bp GTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACCAGGCCTTACTTCTGTGACCCTTTaGCTCTTTATTTCTTCAGAA +
Preference number: 2 (lower is better)
Translates to: VMYQVLFHGFKKDLEPGLTSVTL*LFISSE
Trigger: TTCTGAAGAAATAAAGAGGCAAAGGGTCACAGAAGT...AAGGCCTGGTTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
3UTR-3UTR GCA 90 bp TATACACCAGAAAGCAGCATTGGCCTCAAAGTACAATTAGTCCTTTTAGTTCAGTCAAAAGGGCAACATTaGTTTCTCTTAATGCACAGG +
Preference number: 2 (lower is better)
Translates to: YTPESSIGLKVQLVLLVQSKGQH*FLLMHR
Trigger: CCTGTGCATTAAGAGAAAGCAATGTTGCCCTTTTGA...CTGAACTAAAAGGACTAATTGTACTTTGAGGCCAATGCTGCTTTCTGGTGTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
3UTR CAA 90 bp TGTCCTCCAAAAATGAGCAGTCCAATTCATTTCTATGCATTTAATTaGCCTGTGCATTTAATTTGTCTCTTAGATTCCTGTGAGGCTGTG +
Preference number: 2 (lower is better)
Translates to: CPPKMSSPIHFYAFN*PVHLICLLDSCEAV
Trigger: CACAGCCTCACAGGAATCTAAGAGACAAATTAAATGCACAGGCAAATTAAATGCATAGAAATGAATTGGACTGCTCATTTTTGGAGGACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000291478.9
3UTR-3UTR TCA 90 bp TCTGTTAGGGTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAAAGCTCATACTGTATTTaGATTTATTTCCTGGCAGGC +
Preference number: 2 (lower is better)
Translates to: SVRVMYQVLFHGFKKDLESSYCI*IYFLAG
Trigger: GCCTGCCAGGAAATAAATTCAAATACAGTATGAGCT...TTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCACCCTAACAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
3UTR-3UTR GCA 90 bp TCTGTTAGGGTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAATCAAAAGGGCAACATTaGTTTCTCTTAATGCACAGG +
Preference number: 2 (lower is better)
Translates to: SVRVMYQVLFHGFKKDLESKGQH*FLLMHR
Trigger: CCTGTGCATTAAGAGAAAGCAATGTTGCCCTTTTGA...TTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCACCCTAACAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
3UTR-3UTR CCA 90 bp AAGGAAGAAGGTCTACATTCCTCGAAACTCATCCAGCACAATTCATTGACCATACTAATGATTGTACCTTaGCTCCAGTTAACAAAATCA +
Preference number: 2 (lower is better)
Translates to: KEEGLHSSKLIQHNSLTILMIVP*LQLTKS
Trigger: TGATTTTGTTAACTGGAGCCAAGGTACAATCATTAG...TATGGTCAATGAATTGTGCTGGATGAGTTTCGAGGAATGTAGACCTTCTTCCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291478.9
3UTR CAA 90 bp ATCCAGCACAATTCATTGACCATACTGAATAAGGACATGGTGAGTTaGAACTTTGCCCTACTACAAAGACCTCTTACGTACAAAATAATT +
Preference number: 2 (lower is better)
Translates to: IQHNSLTILNKDMVS*NFALLQRPLTYKII
Trigger: AATTATTTTGTACGTAAGAGGTCTTTGTAGTAGGGCAAAGTTCAAACTCACCATGTCCTTATTCAGTATGGTCAATGAATTGTGCTGGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291478.9
3UTR-3UTR CCA 90 bp CAGCAATTCTCAGTCATGCAAATGCCCGTGTTAAAGTTCTCCATTGGATTTAAAAGTGTATATATGAAATaGAATCATCATCTCTGCCTC +
Preference number: 2 (lower is better)
Translates to: QQFSVMQMPVLKFSIGFKSVYMK*NHHLCL
Trigger: GAGGCAGAGATGATGATTCCATTTCATATATACACT...TTTAAATCCAATGGAGAACTTTAACACGGGCATTTGCATGACTGAGAATTGCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
3UTR-3UTR CCA 90 bp TCTGTTAGGGTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACAACTTTCTGAAAGATaGTATTCTACAGCTGTAGAA +
Preference number: 2 (lower is better)
Translates to: SVRVMYQVLFHGFKKDLEQLSER*YSTAVE
Trigger: TTCTACAGCTGTAGAATACCATCTTTCAGAAAGTTG...TTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCACCCTAACAGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
3UTR CCA 72 bp AGCCCTGCCAGAGAAGTCTCAAGAGAGGTGGGTGATTaGAGTCCTGGTGGGAGGTCCCAACGGTGCCACGGC +
Preference number: 3 (lower is better)
Translates to: SPAREVSREVGD*SPGGRSQRCHG
Trigger: GCCGTGGCACCGTTGGGACCTCCCACCAGGACTCCAATCACCCACCTCTCTTGAGACTTCTCTGGCAGGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
3UTR CCA 72 bp GGGCAGCAGGAGCCTGGGCGTACCTGCTGTTCTGAGTaGGATCTGGGGGAAGTACATTGGGCCATTGGGCCT +
Preference number: 3 (lower is better)
Translates to: GQQEPGRTCCSE*DLGEVHWAIGP
Trigger: AGGCCCAATGGCCCAATGTACTTCCCCCAGATCCCACTCAGAACAGCAGGTACGCCCAGGCTCCTGCTGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
3UTR-3UTR CAA 90 bp GGCAGCAGGAGCCTGGGCGTACCTGCTGTTCTGAGTGGGATCTGGGGGAAGTACCCAGGCGGGGAGATTTaGCTTGGAACATGTTGCCCT +
Preference number: 3 (lower is better)
Translates to: GSRSLGVPAVLSGIWGKYPGGEI*LGTCCP
Trigger: AGGGCAACATGTTCCAAGCAAAATCTCCCCGCCTGG...GTACTTCCCCCAGATCCCACTCAGAACAGCAGGTACGCCCAGGCTCCTGCTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
3UTR GCA 72 bp TGCAGACCTCTAGGGCAGCAGGAGCCTGGGCGTACCTaGTGTTCTGAGTGGGATCTGGGGGAAGTACATTGG +
Preference number: 3 (lower is better)
Translates to: CRPLGQQEPGRT*CSEWDLGEVHW
Trigger: CCAATGTACTTCCCCCAGATCCCACTCAGAACAGCAGGTACGCCCAGGCTCCTGCTGCCCTAGAGGTCTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
3UTR CCA 72 bp ACCTGCTGTTCTGAGTGGGATCTGGGGGAAGTACATTaGGCCATTGGGCCTCTCACAGGTCCCTACTGCCCC +
Preference number: 3 (lower is better)
Translates to: TCCSEWDLGEVH*AIGPLTGPYCP
Trigger: GGGGCAGTAGGGACCTGTGAGAGGCCCAATGGCCCAATGTACTTCCCCCAGATCCCACTCAGAACAGCAGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
3UTR CCA 72 bp AGGAGCCTGGGCGTACCTGCTGTTCTGAGTGGGATCTaGGGGAAGTACATTGGGCCATTGGGCCTCTCACAG +
Preference number: 3 (lower is better)
Translates to: RSLGVPAVLSGI*GKYIGPLGLSQ
Trigger: CTGTGAGAGGCCCAATGGCCCAATGTACTTCCCCCAGATCCCACTCAGAACAGCAGGTACGCCCAGGCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
3UTR GCA 72 bp CAAAAATACCCTCCTTGTCCCCCACCTGCCGTGGTCTaGACACCATTGTTCTGGGCCCTGGCCTTCTCAAGC +
Preference number: 3 (lower is better)
Translates to: QKYPPCPPPAVV*TPLFWALAFSS
Trigger: GCTTGAGAAGGCCAGGGCCCAGAACAATGGTGTGCAGACCACGGCAGGTGGGGGACAAGGAGGGTATTTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000291478.9
3UTR CCA 72 bp TGTCCCCCACCTGCCGTGGTCTGCACACCATTGTTCTaGGCCCTGGCCTTCTCAAGCAGAAACTCAACTTGT +
Preference number: 3 (lower is better)
Translates to: CPPPAVVCTPLF*ALAFSSRNSTC
Trigger: ACAAGTTGAGTTTCTGCTTGAGAAGGCCAGGGCCCAGAACAATGGTGTGCAGACCACGGCAGGTGGGGGACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000291478.9
3UTR-3UTR CAA 90 bp CCCCATAACCCAGCCAGGGAAATAAGCCCAACTTCAGGACCTCTCAGAAATCAGCTGGTAGGGTGGTCTTaGAACCAGAGACCTCGGGAG +
Preference number: 3 (lower is better)
Translates to: PHNPAREISPTSGPLRNQLVGWS*NQRPRE
Trigger: CTCCCGAGGTCTCTGGTTCAAAGACCACCCTACCAG...CTGATTTCTGAGAGGTCCTGAAGTTGGGCTTATTTCCCTGGCTGGGTTATGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
3UTR TCA 72 bp CTACAACAGCCCTCAGCAGGGGACAGATGTTGCAACTaGGTCAACAGTGACTTGGCCAAGGCTTGGTCATGC +
Preference number: 3 (lower is better)
Translates to: LQQPSAGDRCCN*VNSDLAKAWSC
Trigger: GCATGACCAAGCCTTGGCCAAGTCACTGTTGACTCAGTTGCAACATCTGTCCCCTGCTGAGGGCTGTTGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483658.1
3UTR GCA 72 bp GTACATTGGGCCATTGGGCCTCTCACAGGTCCCTACTaGCCCACCATTTTAGACTTTGGAGAGAAGCTCAGC +
Preference number: 3 (lower is better)
Translates to: VHWAIGPLTGPY*PTILDFGEKLS
Trigger: GCTGAGCTTCTCTCCAAAGTCTAAAATGGTGGGGCAGTAGGGACCTGTGAGAGGCCCAATGGCCCAATGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
3UTR-3UTR CAA 90 bp CCCCATAACCCAGCCAGGGAAATAAGCCCAACTTCAGGACCTCTCAGAAATCAGCATCATCTCTGCCTCTaGCCTTGGTGTGGGGTTTCC +
Preference number: 3 (lower is better)
Translates to: PHNPAREISPTSGPLRNQHHLCL*PWCGVS
Trigger: GGAAACCCCACACCAAGGCAAGAGGCAGAGATGATG...CTGATTTCTGAGAGGTCCTGAAGTTGGGCTTATTTCCCTGGCTGGGTTATGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
3UTR-3UTR CAA 90 bp TGGGTTTGCTCCCATGCTGCAGAAGGCATTTGCAGGACAGAATTCCCAGCTCTATCAGGTGTCTTGCCTTaGTTCCCTGTGTGGTCCTGG +
Preference number: 3 (lower is better)
Translates to: WVCSHAAEGICRTEFPALSGVLP*FPVWSW
Trigger: CCAGGACCACACAGGGAACAAAGGCAAGACACCTGA...TAGAGCTGGGAATTCTGTCCTGCAAATGCCTTCTGCAGCATGGGAGCAAACCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483658.1
3UTR GCA 72 bp CTCTGTGCAACTGACCAGCCATCTGTTGGAAAGTCGTaGGCAGTTGCCTGCCTTTCATGGATGCTTCCATTG +
Preference number: 3 (lower is better)
Translates to: LCATDQPSVGKS*AVACLSWMLPL
Trigger: CAATGGAAGCATCCATGAAAGGCAGGCAACTGCGCACGACTTTCCAACAGATGGCTGGTCAGTTGCACAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483658.1
3UTR-3UTR CAA 90 bp AAACTCTGTGTTTGGGGTTGGGGCTCTCTCTTGAGTGTGTTGGAAACTGGAGGACCAGGCGGGGAGATTTaGCTTGGAACATGTTGCCCT +
Preference number: 3 (lower is better)
Translates to: KLCVWGWGSLLSVLETGGPGGEI*LGTCCP
Trigger: AGGGCAACATGTTCCAAGCAAAATCTCCCCGCCTGG...TCCTCCAGTTTCCAACACACTCAAGAGAGAGCCCCAACCCCAAACACAGAGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
3UTR-3UTR CAA 90 bp CCCCATAACCCAGCCAGGGAAATAAGCCCAACTTCAGGACCTCTCAGAAATCAGGGTTGGGGCTCTCTCTaGAGTGTGTTGGAAACTGGA +
Preference number: 3 (lower is better)
Translates to: PHNPAREISPTSGPLRNQGWGSL*SVLETG
Trigger: TCCAGTTTCCAACACACTCAAGAGAGAGCCCCAACC...CTGATTTCTGAGAGGTCCTGAAGTTGGGCTTATTTCCCTGGCTGGGTTATGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
3UTR-3UTR CAA 90 bp CCCCATAACCCAGCCAGGGAAATAAGCCCAACTTCAGGACCTCTCAGAAATCAGCTCAGCAACCTCGAATaGCACCCAGTAGAGAAGAAG +
Preference number: 3 (lower is better)
Translates to: PHNPAREISPTSGPLRNQLSNLE*HPVEKK
Trigger: CTTCTTCTCTACTGGGTGCAATTCGAGGTTGCTGAG...CTGATTTCTGAGAGGTCCTGAAGTTGGGCTTATTTCCCTGGCTGGGTTATGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
3UTR-3UTR CAA 90 bp TACAAAGACAGTCCTTTCCTGAGCCAGGTGCAATTCCAGAGAATGACACTTTGCCTGGTAGGGTGGTCTTaGAACCAGAGACCTCGGGAG +
Preference number: 3 (lower is better)
Translates to: YKDSPFLSQVQFQRMTLCLVGWS*NQRPRE
Trigger: CTCCCGAGGTCTCTGGTTCAAAGACCACCCTACCAG...GCAAAGTGTCATTCTCTGGAATTGCACCTGGCTCAGGAAAGGACTGTCTTTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
3UTR TCA 72 bp AAGAGTGTCTTCTGGACCCTGGGGCTGATGCTCACATaGAACCTTCTAGCCAATGTGCACTTTCAGGCACTC +
Preference number: 3 (lower is better)
Translates to: KSVFWTLGLMLT*NLLANVHFQAL
Trigger: GAGTGCCTGAAAGTGCACATTGGCTAGAAGGTTTCATGTGAGCATCAGCCCCAGGGTCCAGAAGACACTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483658.1
3UTR GCA 72 bp GACCAGCCATCTGTTGGAAAGTCGTGCGCAGTTGCCTaGCTTTCATGGATGCTTCCATTGCCTGTTCAACAT +
Preference number: 3 (lower is better)
Translates to: DQPSVGKSCAVA*LSWMLPLPVQH
Trigger: ATGTTGAACAGGCAATGGAAGCATCCATGAAAGGCAGGCAACTGCGCACGACTTTCCAACAGATGGCTGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483658.1
3UTR GCA 72 bp AGCAACAGACACAGAAGAGTGGGTTTGCTCCCATGCTaGAGAAGGCATTTGCAGGACAGAATTCCCAGCTCT +
Preference number: 3 (lower is better)
Translates to: SNRHRRVGLLPC*RRHLQDRIPSS
Trigger: AGAGCTGGGAATTCTGTCCTGCAAATGCCTTCTGCAGCATGGGAGCAAACCCACTCTTCTGTGTCTGTTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483658.1
3UTR CCA 72 bp TGGTGTGGGGTTTCCATGAAACTCTGTGTTTGGGGTTaGGGCTCTCTCTTGAGTGTGTTGGAAACTGGAGGA +
Preference number: 3 (lower is better)
Translates to: WCGVSMKLCVWG*GSLLSVLETGG
Trigger: TCCTCCAGTTTCCAACACACTCAAGAGAGAGCCCCAACCCCAAACACAGAGTTTCATGGAAACCCCACACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
3UTR-3UTR CAA 90 bp GAAGGGGCTGCACTGTGCAAGGAGGAGCTTCCATTTTGCTTTCAGCGAGGAGACTTTGTGAATCTCAAGTaGAGGGGCCAAAAGAAGTTG +
Preference number: 3 (lower is better)
Translates to: EGAALCKEELPFCFQRGDFVNLK*RGQKKL
Trigger: CAACTTCTTTTGGCCCCTCAACTTGAGATTCACAAA...GTCTCCTCGCTGAAAGCAAAATGGAAGCTCCTCCTTGCACAGTGCAGCCCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000483658.1
3UTR-3UTR CAA 90 bp GCAAATATCCAGGCATTAAACATCAGTCAGGTGGCCCAGGAGCAAGATGACATAGAAAGTCGTGCGCAGTaGCCTGCCTTTCATGGATGC +
Preference number: 3 (lower is better)
Translates to: ANIQALNISQVAQEQDDIESRAQ*PAFHGC
Trigger: GCATCCATGAAAGGCAGGCAACTGCGCACGACTTTC...TATGTCATCTTGCTCCTGGGCCACCTGACTGATGTTTAATGCCTGGATATTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483658.1
3UTR GCA 72 bp TTGGAAAGTCGTGCGCAGTTGCCTGCCTTTCATGGATaGTTCCATTGCCTGTTCAACATACTCACTCTCCAG +
Preference number: 3 (lower is better)
Translates to: LESRAQLPAFHG*FHCLFNILTLQ
Trigger: CTGGAGAGTGAGTATGTTGAACAGGCAATGGAAGCATCCATGAAAGGCAGGCAACTGCGCACGACTTTCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483658.1
3UTR CCA 72 bp TTGCCTTGGTGTGGGGTTTCCATGAAACTCTGTGTTTaGGGTTGGGGCTCTCTCTTGAGTGTGTTGGAAACT +
Preference number: 3 (lower is better)
Translates to: LPWCGVSMKLCV*GWGSLLSVLET
Trigger: AGTTTCCAACACACTCAAGAGAGAGCCCCAACCCCAAACACAGAGTTTCATGGAAACCCCACACCAAGGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
3UTR CCA 72 bp CACCTGCCGTGGTCTGCACACCATTGTTCTGGGCCCTaGCCTTCTCAAGCAGAAACTCAACTTGTTATAAAA +
Preference number: 3 (lower is better)
Translates to: HLPWSAHHCSGP*PSQAETQLVIK
Trigger: TTTTATAACAAGTTGAGTTTCTGCTTGAGAAGGCCAGGGCCCAGAACAATGGTGTGCAGACCACGGCAGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291478.9
3UTR CCA 72 bp CAGGGGACAGATGTTGCAACTGAGTCAACAGTGACTTaGCCAAGGCTTGGTCATGCAGAGGTGAAAGCAAAT +
Preference number: 3 (lower is better)
Translates to: QGTDVATESTVT*PRLGHAEVKAN
Trigger: ATTTGCTTTCACCTCTGCATGACCAAGCCTTGGCCAAGTCACTGTTGACTCAGTTGCAACATCTGTCCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483658.1
3UTR-3UTR CAA 90 bp TACAAAGACAGTCCTTTCCTGAGCCAGGTGCAATTCCAGAGAATGACACTTTGCACCTCTTCACTCATGTaGCAGACCTCTAGGGCAGCA +
Preference number: 3 (lower is better)
Translates to: YKDSPFLSQVQFQRMTLCTSSLM*QTSRAA
Trigger: TGCTGCCCTAGAGGTCTGCAACATGAGTGAAGAGGT...GCAAAGTGTCATTCTCTGGAATTGCACCTGGCTCAGGAAAGGACTGTCTTTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
3UTR-3UTR CAA 90 bp TACAAAGACAGTCCTTTCCTGAGCCAGGTGCAATTCCAGAGAATGACACTTTGCGGTTGGGGCTCTCTCTaGAGTGTGTTGGAAACTGGA +
Preference number: 3 (lower is better)
Translates to: YKDSPFLSQVQFQRMTLCGWGSL*SVLETG
Trigger: TCCAGTTTCCAACACACTCAAGAGAGAGCCCCAACC...GCAAAGTGTCATTCTCTGGAATTGCACCTGGCTCAGGAAAGGACTGTCTTTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
3UTR GCA 72 bp TGTGGACCACAAAGCAGTGAAGCTAGCTTTCTCCTCTaGTTCCTCTACTCCCCCTTACATTGTTTATGGCTG +
Preference number: 3 (lower is better)
Translates to: CGPQSSEASFLL*FLYSPLHCLWL
Trigger: CAGCCATAAACAATGTAAGGGGGAGTAGAGGAAGCAGAGGAGAAAGCTAGCTTCACTGCTTTGTGGTCCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000291478.9
3UTR GCA 72 bp AGAGAGTTTGAAGCAACAGACACAGAAGAGTGGGTTTaGTCCCATGCTGCAGAAGGCATTTGCAGGACAGAA +
Preference number: 3 (lower is better)
Translates to: REFEATDTEEWV*SHAAEGICRTE
Trigger: TTCTGTCCTGCAAATGCCTTCTGCAGCATGGGAGCAAACCCACTCTTCTGTGTCTGTTGCTTCAAACTCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483658.1
3UTR CCA 72 bp CCTTTCCTGTCTTCTCACTTCCCAAATATGTGTACTTaGGGGAATTCCATGCAACCCCACATCTGGATCCTC +
Preference number: 3 (lower is better)
Translates to: PFLSSHFPNMCT*GNSMQPHIWIL
Trigger: GAGGATCCAGATGTGGGGTTGCATGGAATTCCCCCAAGTACACATATTTGGGAAGTGAGAAGACAGGAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291478.9
3UTR CCA 72 bp TCTGTTGGAAAGTCGTGCGCAGTTGCCTGCCTTTCATaGATGCTTCCATTGCCTGTTCAACATACTCACTCT +
Preference number: 3 (lower is better)
Translates to: SVGKSCAVACLS*MLPLPVQHTHS
Trigger: AGAGTGAGTATGTTGAACAGGCAATGGAAGCATCCATGAAAGGCAGGCAACTGCGCACGACTTTCCAACAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483658.1
3UTR CCA 72 bp CTGGAAACACAAAAGCTGGCACAAGTGTCATTATCATaGAATCCATGGCTCCTTCCCTCTGTGCAACTGACC +
Preference number: 3 (lower is better)
Translates to: LETQKLAQVSLS*NPWLLPSVQLT
Trigger: GGTCAGTTGCACAGAGGGAAGGAGCCATGGATTCCATGATAATGACACTTGTGCCAGCTTTTGTGTTTCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483658.1
3UTR-3UTR CAA 90 bp TACAAAGACAGTCCTTTCCTGAGCCAGGTGCAATTCCAGAGAATGACACTTTGCTTTGCTTGGAACATGTaGCCCTCTGAGCAAAGGCTG +
Preference number: 3 (lower is better)
Translates to: YKDSPFLSQVQFQRMTLCFAWNM*PSEQRL
Trigger: CAGCCTTTGCTCAGAGGGCAACATGTTCCAAGCAAA...GCAAAGTGTCATTCTCTGGAATTGCACCTGGCTCAGGAAAGGACTGTCTTTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
3UTR-3UTR CAA 90 bp TCAGGTATTGATGGAAACTCATATGATGGCCATCCCTGGGCCAACAAATTAGCTCTCAGCAGGGGGATCTaGATTCAGGTCATCCACAGT +
Preference number: 3 (lower is better)
Translates to: SGIDGNSYDGHPWANKLALSRGI*IQVIHS
Trigger: ACTGTGGATGACCTGAATCAAGATCCCCCTGCTGAG...AGCTAATTTGTTGGCCCAGGGATGGCCATCATATGAGTTTCCATCAATACCTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000291478.9
3UTR-3UTR CAA 90 bp GCCAGTGTTTGGGAAAGGCTAAAGTTAACCCTCATCTTCTCTACCACACATCATTTTGCTTGGAACATGTaGCCCTCTGAGCAAAGGCTG +
Preference number: 3 (lower is better)
Translates to: ASVWERLKLTLIFSTTHHFAWNM*PSEQRL
Trigger: CAGCCTTTGCTCAGAGGGCAACATGTTCCAAGCAAA...ATGATGTGTGGTAGAGAAGATGAGGGTTAACTTTAGCCTTTCCCAAACACTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
3UTR-3UTR CAA 90 bp AGAACTATGAGCAAGGTCTATGGTAAAGAGCCACTCAGCTCAGTGTCCTGTTGTAGGGGCCAAAAGAAGTaGAGTTCCAAGTTCCTTCCA +
Preference number: 3 (lower is better)
Translates to: RTMSKVYGKEPLSSVSCCRGQKK*SSKFLP
Trigger: TGGAAGGAACTTGGAACTCAACTTCTTTTGGCCCCT...ACAACAGGACACTGAGCTGAGTGGCTCTTTACCATAGACCTTGCTCATAGTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483658.1
3UTR TCA 72 bp CCACTTATGAATAAGGCCCTTTGTCTGAATGGCCAGTaGAGCCCACTCCAAATTCTCAAAAGACTTGAGGGG +
Preference number: 3 (lower is better)
Translates to: PLMNKALCLNGQ*SPLQILKRLEG
Trigger: CCCCTCAAGTCTTTTGAGAATTTGGAGTGGGCTTCACTGGCCATTCAGACAAAGGGCCTTATTCATAAGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291478.9
3UTR-3UTR CAA 90 bp CTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTCATCAGTCACATTCAGTCTaGCTTTGGTTCACACTGCAC +
Preference number: 3 (lower is better)
Translates to: LSFQNNSELPVNLRGAFHQSHSV*LWFTLH
Trigger: GTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTG...ATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
3UTR-3UTR CAA 90 bp AGCAGAAACTCAACTTGTTATAAAAACTCAGAATGGCTCAGCAGGGGGATCTTGGAGCTGCCAGTGAATTaGCGGGGAGCGTTTCATATA +
Preference number: 3 (lower is better)
Translates to: SRNSTCYKNSEWLSRGILELPVN*RGAFHI
Trigger: TATATGAAACGCTCCCCGCAAATTCACTGGCAGCTC...CAAGATCCCCCTGCTGAGCCATTCTGAGTTTTTATAACAAGTTGAGTTTCTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000291478.9
3UTR-3UTR CAA 90 bp GCTCCCTCATATTCTCACAAATCTAAATTGCCATGCTCTTCCACAGAGGCAAGACCCAAATATGTGTACTaGGGGGAATTCCATGCAACC +
Preference number: 3 (lower is better)
Translates to: APSYSHKSKLPCSSTEARPKYVY*GEFHAT
Trigger: GGTTGCATGGAATTCCCCCAAGTACACATATTTGGG...TCTTGCCTCTGTGGAAGAGCATGGCAATTTAGATTTGTGAGAATATGAGGGAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000291478.9
3UTR CCA 72 bp CCTCCCAACTCTGTTGTAAAAGCTGATATGAAAGCTTaGGGTCTGTCTAACATTCTGTCAACTGCCCCCATA +
Preference number: 3 (lower is better)
Translates to: PPNSVVKADMKA*GLSNILSTAPI
Trigger: TATGGGGGCAGTTGACAGAATGTTAGACAGACCCCAAGCTTTCATATCAGCTTTTACAACAGAGTTGGGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291478.9
3UTR-3UTR CAA 90 bp AGCAGAAACTCAACTTGTTATAAAAACTCAGAATGGCTCAGCAGGGGGATCTTGCAGTCACATTCAGTCTaGCTTTGGTTCACACTGCAC +
Preference number: 3 (lower is better)
Translates to: SRNSTCYKNSEWLSRGILQSHSV*LWFTLH
Trigger: GTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTG...CAAGATCCCCCTGCTGAGCCATTCTGAGTTTTTATAACAAGTTGAGTTTCTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000291478.9
3UTR-3UTR CAA 90 bp ATGTGCGATGGTCCCTATGGGGAAACCTGTCCACTTATGAATAAGGCCCTTTGTTTCAAAAGGGCAACATaGCTTTCTCTTAATGCACAG +
Preference number: 3 (lower is better)
Translates to: MCDGPYGETCPLMNKALCFKRAT*LSLNAQ
Trigger: CTGTGCATTAAGAGAAAGCAATGTTGCCCTTTTGAA...ACAAAGGGCCTTATTCATAAGTGGACAGGTTTCCCCATAGGGACCATCGCACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291478.9
3UTR-3UTR CAA 90 bp GTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACCAGGCCTTGAGCTGCCAGTGAATTaGCGGGGAGCGTTTCATATA +
Preference number: 3 (lower is better)
Translates to: VMYQVLFHGFKKDLEPGLELPVN*RGAFHI
Trigger: TATATGAAACGCTCCCCGCAAATTCACTGGCAGCTC...AAGGCCTGGTTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
3UTR-3UTR CAA 90 bp ATGTGCGATGGTCCCTATGGGGAAACCTGTCCACTTATGAATAAGGCCCTTTGTGATGGAAGTCAGGTATaGATGGAAACTCATATGATG +
Preference number: 3 (lower is better)
Translates to: MCDGPYGETCPLMNKALCDGSQV*METHMM
Trigger: CATCATATGAGTTTCCATCAATACCTGACTTCCATC...ACAAAGGGCCTTATTCATAAGTGGACAGGTTTCCCCATAGGGACCATCGCACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291478.9
3UTR-3UTR CAA 90 bp GCTCCCATGCTGCAGAAGGCATTTGCAGGACAGAATTCCCAGCTCTATTCTAGACTGCTTTCACATTACTaGCAACGTGATTTGTCAAAA +
Preference number: 3 (lower is better)
Translates to: APMLQKAFAGQNSQLYSRLLSHY*QRDLSK
Trigger: TTTTGACAAATCACGTTGCAAGTAATGTGAAAGCAG...TCTAGAATAGAGCTGGGAATTCTGTCCTGCAAATGCCTTCTGCAGCATGGGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483658.1
3UTR TCA 72 bp GTGACTTTTACTGCTGCTCAGACCCTGAATAACCACTaGCGAGGTTTAAGAGGTACATCTCTCAATTCAGAG +
Preference number: 3 (lower is better)
Translates to: VTFTAAQTLNNH*RGLRGTSLNSE
Trigger: CTCTGAATTGAGAGATGTACCTCTTAAACCTCGTCAGTGGTTATTCAGGGTCTGAGCAGCAGTAAAAGTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
3UTR TCA 72 bp GCAGGCTTTCTTTCCAGAATAATTCTGAGCTGCCAGTaGATTTGCGGGGAGCGTTTCATATACAGAAAGAAC +
Preference number: 3 (lower is better)
Translates to: AGFLSRIILSCQ*ICGERFIYRKN
Trigger: GTTCTTTCTGTATATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAGCCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
3UTR TCA 72 bp GTTATAAAAACTCAGAATGGCTCAGCAGGGGGATCTTaGTTCAGGTCATCCACAGTGGACAGAACAGAACTT +
Preference number: 3 (lower is better)
Translates to: VIKTQNGSAGGS*FRSSTVDRTEL
Trigger: AAGTTCTGTTCTGTCCACTGTGGATGACCTGAATCAAGATCCCCCTGCTGAGCCATTCTGAGTTTTTATAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000291478.9
3UTR TCA 72 bp CAATGGTCAACTATTCGGCTCTTCTCCATTTCTTCATaGAGTCTTTACTTTCCCCTGGCAGTGCACAGAGAT +
Preference number: 3 (lower is better)
Translates to: QWSTIRLFSISS*SLYFPLAVHRD
Trigger: ATCTCTGTGCACTGCCAGGGGAAAGTAAAGACTTCATGAAGAAATGGAGAAGAGCCGAATAGTTGACCATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483658.1
3UTR GCA 72 bp TTCCTGAGCCAGGTGCAATTCCAGAGAATGACACTTTaGATTGAGAGCACGATTCCTTCGAAAAGTTCAGAA +
Preference number: 3 (lower is better)
Translates to: FLSQVQFQRMTL*IESTIPSKSSE
Trigger: TTCTGAACTTTTCGAAGGAATCGTGCTCTCAATGCAAAGTGTCATTCTCTGGAATTGCACCTGGCTCAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
3UTR GCA 72 bp TTGATTCAGGTCATCCACAGTGGACAGAACAGAACTTaGCAAGCTGGACTTTATGGATATTGGGAATCCTCA +
Preference number: 3 (lower is better)
Translates to: LIQVIHSGQNRT*QAGLYGYWESS
Trigger: TGAGGATTCCCAATATCCATAAAGTCCAGCTTGGCAAGTTCTGTTCTGTCCACTGTGGATGACCTGAATCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291478.9
3UTR CCA 72 bp TATATGAAATGGAATCATCATCTCTGCCTCTTGCCTTaGTGTGGGGTTTCCATGAAACTCTGTGTTTGGGGT +
Preference number: 3 (lower is better)
Translates to: YMKWNHHLCLLP*CGVSMKLCVWG
Trigger: ACCCCAAACACAGAGTTTCATGGAAACCCCACACCAAGGCAAGAGGCAGAGATGATGATTCCATTTCATATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
3UTR-3UTR CAA 90 bp AAGGAAGAAGGTCTACATTCCTCGAAACTCATCCAGCACAATTCATTGACCATACTCAGAGCCTACAGTTaGTCCCATGACAAACCCTAT +
Preference number: 3 (lower is better)
Translates to: KEEGLHSSKLIQHNSLTILRAYS*SHDKPY
Trigger: ATAGGGTTTGTCATGGGACAAACTGTAGGCTCTGAG...TATGGTCAATGAATTGTGCTGGATGAGTTTCGAGGAATGTAGACCTTCTTCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291478.9
3UTR TCA 72 bp GAGAAGATATTTTCTTCTCACTTCTGCCCTCCCAAGTaGAGAAAGTGGTTGTTGGGTTCTTCTCTGTCCTTT +
Preference number: 3 (lower is better)
Translates to: EKIFSSHFCPPK*RKWLLGSSLSF
Trigger: AAAGGACAGAGAAGAACCCAACAACCACTTTCTTCACTTGGGAGGGCAGAAGTGAGAAGAAAATATCTTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291478.9
3UTR CCA 72 bp TCAAGCAGAAACTCAACTTGTTATAAAAACTCAGAATaGCTCAGCAGGGGGATCTTGATTCAGGTCATCCAC +
Preference number: 3 (lower is better)
Translates to: SSRNSTCYKNSE*LSRGILIQVIH
Trigger: GTGGATGACCTGAATCAAGATCCCCCTGCTGAGCCATTCTGAGTTTTTATAACAAGTTGAGTTTCTGCTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000291478.9
3UTR-3UTR CAA 90 bp TACAAAGACAGTCCTTTCCTGAGCCAGGTGCAATTCCAGAGAATGACACTTTGCATCAGGTTTAATCTATaGAAAATAAAGCAGTGGGCC +
Preference number: 3 (lower is better)
Translates to: YKDSPFLSQVQFQRMTLCIRFNL*KIKQWA
Trigger: GGCCCACTGCTTTATTTTCAATAGATTAAACCTGAT...GCAAAGTGTCATTCTCTGGAATTGCACCTGGCTCAGGAAAGGACTGTCTTTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
3UTR-3UTR CAA 90 bp GTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACCAGGCCTTACATTCAGTCTTGCTTaGGTTCACACTGCACGTCTA +
Preference number: 3 (lower is better)
Translates to: VMYQVLFHGFKKDLEPGLTFSLA*VHTARL
Trigger: TAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGT...AAGGCCTGGTTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
3UTR-3UTR CAA 90 bp TATACACCAGAAAGCAGCATTGGCCTCAAAGTACAATTAGTCCTTTTAGTTCAGCAGTCACATTCAGTCTaGCTTTGGTTCACACTGCAC +
Preference number: 3 (lower is better)
Translates to: YTPESSIGLKVQLVLLVQQSHSV*LWFTLH
Trigger: GTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTG...CTGAACTAAAAGGACTAATTGTACTTTGAGGCCAATGCTGCTTTCTGGTGTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
3UTR-3UTR CAA 90 bp AGCAGAAACTCAACTTGTTATAAAAACTCAGAATGGCTCAGCAGGGGGATCTTGTATCAATCTATAATCTaGGATGGGATGAGGTGGAGG +
Preference number: 3 (lower is better)
Translates to: SRNSTCYKNSEWLSRGILYQSII*DGMRWR
Trigger: CCTCCACCTCATCCCATCCAAGATTATAGATTGATA...CAAGATCCCCCTGCTGAGCCATTCTGAGTTTTTATAACAAGTTGAGTTTCTGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000291478.9
3UTR-3UTR CAA 90 bp TTGACCATACTGAATAAGGACATGGTGAGTTTGAACTTTGCCCTACTACAAAGACTACTCCCCCTTACATaGTTTATGGCTGAGAGAGAC +
Preference number: 3 (lower is better)
Translates to: LTILNKDMVSLNFALLQRLLPLT*FMAERD
Trigger: GTCTCTCTCAGCCATAAACAATGTAAGGGGGAGTAG...TCTTTGTAGTAGGGCAAAGTTCAAACTCACCATGTCCTTATTCAGTATGGTCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000291478.9
3UTR-3UTR CAA 90 bp AAGGAAGAAGGTCTACATTCCTCGAAACTCATCCAGCACAATTCATTGACCATAGAAAGTGTTGGTACGTaGTTCATAGGAACTGTAGGA +
Preference number: 3 (lower is better)
Translates to: KEEGLHSSKLIQHNSLTIESVGT*FIGTVG
Trigger: TCCTACAGTTCCTATGAACAACGTACCAACACTTTC...TATGGTCAATGAATTGTGCTGGATGAGTTTCGAGGAATGTAGACCTTCTTCCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291478.9
3UTR-3UTR CAA 90 bp CCAAGATTTATACAGCAACAATGGTCAACTATTCGGCTCTTCTCCATTTCTTCATCCCAGCACCACTTATaGAAAAGGATGTCCTTTTCC +
Preference number: 3 (lower is better)
Translates to: PRFIQQQWSTIRLFSISSSQHHL*KRMSFS
Trigger: GGAAAAGGACATCCTTTTCAATAAGTGGTGCTGGGA...TGAAGAAATGGAGAAGAGCCGAATAGTTGACCATTGTTGCTGTATAAATCTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483658.1
3UTR-3UTR CAA 90 bp CCAAGATTTATACAGCAACAATGGTCAACTATTCGGCTCTTCTCCATTTCTTCATCATGGATGCTTCCATaGCCTGTTCAACATACTCAC +
Preference number: 3 (lower is better)
Translates to: PRFIQQQWSTIRLFSISSSWMLP*PVQHTH
Trigger: GTGAGTATGTTGAACAGGCAATGGAAGCATCCATGA...TGAAGAAATGGAGAAGAGCCGAATAGTTGACCATTGTTGCTGTATAAATCTTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483658.1
3UTR-3UTR CAA 90 bp TATACACCAGAAAGCAGCATTGGCCTCAAAGTACAATTAGTCCTTTTAGTTCAGGAAAGTGTTGGTACGTaGTTCATAGGAACTGTAGGA +
Preference number: 3 (lower is better)
Translates to: YTPESSIGLKVQLVLLVQESVGT*FIGTVG
Trigger: TCCTACAGTTCCTATGAACAACGTACCAACACTTTC...CTGAACTAAAAGGACTAATTGTACTTTGAGGCCAATGCTGCTTTCTGGTGTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
3UTR-3UTR CAA 90 bp AGCAGAAACTCAACTTGTTATAAAAACTCAGAATGGCTCAGCAGGGGGATCTTGGTGATGTATCAGGTTTaGTTCCATGGCTTTAAAAAG +
Preference number: 3 (lower is better)
Translates to: SRNSTCYKNSEWLSRGILVMYQV*FHGFKK
Trigger: CTTTTTAAAGCCATGGAACAAAACCTGATACATCAC...CAAGATCCCCCTGCTGAGCCATTCTGAGTTTTTATAACAAGTTGAGTTTCTGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000291478.9
3UTR TCA 72 bp GTGACCTTGACCATTGTTTGTTTTTCCCATTTCAGCTaGAAGTTCACTCCCACTGTGAACTACCATCATAAT +
Preference number: 3 (lower is better)
Translates to: VTLTIVCFSHFS*KFTPTVNYHHN
Trigger: ATTATGATGGTAGTTCACAGTGGGAGTGAACTTTCAGCTGAAATGGGAAAAACAAACAATGGTCAAGGTCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000291478.9
3UTR TCA 72 bp TGCAGTAAATCCAAAACACAATGCTTCTTGCTACTCTaGATGACCACAGAAAAGGTTAGATTCAAGCTGGAC +
Preference number: 3 (lower is better)
Translates to: CSKSKTQCFLLL*MTTEKVRFKLD
Trigger: GTCCAGCTTGAATCTAACCTTTTCTGTGGTCATTCAGAGTAGCAAGAAGCATTGTGTTTTGGATTTACTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483658.1
3UTR TCA 72 bp TCTATATTTGGAAATGCCATTCCAACCCTGAAGGCTTaGAATGTGCTGCTTAAAGGTGTGCCAGGAAAATAT +
Preference number: 3 (lower is better)
Translates to: SIFGNAIPTLKA*NVLLKGVPGKY
Trigger: ATATTTTCCTGGCACACCTTTAAGCAGCACATTTCAAGCCTTCAGGGTTGGAATGGCATTTCCAAATATAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483658.1
3UTR GCA 72 bp AAAATGAGTGTATATATGAAATGGAATCATCATCTCTaGCTCTTGCCTTGGTGTGGGGTTTCCATGAAACTC +
Preference number: 3 (lower is better)
Translates to: KMSVYMKWNHHL*LLPWCGVSMKL
Trigger: GAGTTTCATGGAAACCCCACACCAAGGCAAGAGGCAGAGATGATGATTCCATTTCATATATACACTCATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
3UTR TCA 72 bp GTACTTAATGTCAACAGACACTTCACTTCCTACACATaGAGATGCATTCAGTCATCCTTGTCTCCTTTAGAT +
Preference number: 3 (lower is better)
Translates to: VLNVNRHFTSYT*RCIQSSLSPLD
Trigger: ATCTAAAGGAGACAAGGATGACTGAATGCATCTTCATGTGTAGGAAGTGAAGTGTCTGTTGACATTAAGTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483658.1
3UTR CCA 72 bp GGGCATTTTACTCTTCGCATCTGCCATAAGAAATACTaGAGAAAACAACTTATGGACATAAGACTTCATCAG +
Preference number: 3 (lower is better)
Translates to: GHFTLRICHKKY*RKQLMDIRLHQ
Trigger: CTGATGAAGTCTTATGTCCATAAGTTGTTTTCTCCAGTATTTCTTATGGCAGATGCGAAGAGTAAAATGCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291478.9
3UTR-3UTR CAA 90 bp TCTGTTAGGGTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAATTCAAAAGGGCAACATaGCTTTCTCTTAATGCACAG +
Preference number: 3 (lower is better)
Translates to: SVRVMYQVLFHGFKKDLEFKRAT*LSLNAQ
Trigger: CTGTGCATTAAGAGAAAGCAATGTTGCCCTTTTGAA...TTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCACCCTAACAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
3UTR TCA 72 bp AGAGGTACATCTCTCAATTCAGAGAACTGCACGGAGTaGAATGATGAACAGAATTATTTACAGTCACATTCA +
Preference number: 3 (lower is better)
Translates to: RGTSLNSENCTE*NDEQNYLQSHS
Trigger: TGAATGTGACTGTAAATAATTCTGTTCATCATTTCACTCCGTGCAGTTCTCTGAATTGAGAGATGTACCTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
3UTR CCA 72 bp TTAATTTATCAATCTATAATCTTGGATGGGATGAGGTaGAGGGCGAATGAGGAAGTTGTCTTTGAAACCAAT +
Preference number: 3 (lower is better)
Translates to: LIYQSIILDGMR*RANEEVVFETN
Trigger: ATTGGTTTCAAAGACAACTTCCTCATTCGCCCTCCACCTCATCCCATCCAAGATTATAGATTGATAAATTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291478.9
3UTR CCA 72 bp ATCCTTGTCTCCTTTAGATATGCATATATCGTTAGATaGCATTTAGAAGTCATGTTTACTCTTCTCACTTGG +
Preference number: 3 (lower is better)
Translates to: ILVSFRYAYIVR*HLEVMFTLLTW
Trigger: CCAAGTGAGAAGAGTAAACATGACTTCTAAATGCCATCTAACGATATATGCATATCTAAAGGAGACAAGGAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483658.1
3UTR TCA 72 bp TGTACATATATCCATATTTTCCAACAGTTTGCACTTTaGTCACTACTGTTCTCTGAACAGGATCTCATTATG +
Preference number: 3 (lower is better)
Translates to: CTYIHIFQQFAL*SLLFSEQDLIM
Trigger: CATAATGAGATCCTGTTCAGAGAACAGTAGTGATCAAAGTGCAAACTGTTGGAAAATATGGATATATGTACA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR GCA 90 bp GGAGTCCTGGTGGGAGGTCCCAACGGTGCCACGGCTAACCCGGTGAGCTGCAGGCACTGCAGCAGCCGCTaGCCCTCCCGGTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: GVLVGGPNGATANPVSCRHCSSR*PSRSSS
Trigger: GGAGCTGGACCGGGAGGGGCAGCGGCTGCTGCAGTG...CCTGCAGCTCACCGGGTTAGCCGTGGCACCGTTGGGACCTCCCACCAGGACTCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR TCA 90 bp GGAGTCCTGGTGGGAGGTCCCAACGGTGCCACGGCTAACCCGGTGAGCTGCAGGTGGCGTCCCGCAGCTTaGCCTCCCGATCCGAAAGGC +
Preference number: 4 (lower is better)
Translates to: GVLVGGPNGATANPVSCRWRPAA*PPDPKG
Trigger: GCCTTTCGGATCGGGAGGTCAAGCTGCGGGACGCCA...CCTGCAGCTCACCGGGTTAGCCGTGGCACCGTTGGGACCTCCCACCAGGACTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR TCA 90 bp GGAGTCCTGGTGGGAGGTCCCAACGGTGCCACGGCTAACCCGGTGAGCTGCAGGGGGCGTACTGGTAGCTaGCTCCGATCTCCGTGTGGC +
Preference number: 4 (lower is better)
Translates to: GVLVGGPNGATANPVSCRGRTGS*LRSPCG
Trigger: GCCACACGGAGATCGGAGTCAGCTACCAGTACGCCC...CCTGCAGCTCACCGGGTTAGCCGTGGCACCGTTGGGACCTCCCACCAGGACTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR TCA 90 bp GGAGTCCTGGTGGGAGGTCCCAACGGTGCCACGGCTAACCCGGTGAGCTGCAGGCCGACTCGATGTGGCTaGTGGAGCTGCTGTGGGGTG +
Preference number: 4 (lower is better)
Translates to: GVLVGGPNGATANPVSCRPTRCG*WSCCGV
Trigger: CACCCCACAGCAGCTCCATCAGCCACATCGAGTCGG...CCTGCAGCTCACCGGGTTAGCCGTGGCACCGTTGGGACCTCCCACCAGGACTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR TCA 90 bp CTGGTGGGAGGTCCCAACGGTGCCACGGCTAACCCGGTGAGCTGCAGGGACAAGTGGCGTCCCGCAGCTTaGCCTCCCGATCCGAAAGGC +
Preference number: 4 (lower is better)
Translates to: LVGGPNGATANPVSCRDKWRPAA*PPDPKG
Trigger: GCCTTTCGGATCGGGAGGTCAAGCTGCGGGACGCCA...CTTGTCCCTGCAGCTCACCGGGTTAGCCGTGGCACCGTTGGGACCTCCCACCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp GGAGTCCTGGTGGGAGGTCCCAACGGTGCCACGGCTAACCCGGTGAGCTGCAGGGCAGGTGCTGCCGGGTaGAGTGCAGCTTGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: GVLVGGPNGATANPVSCRAGAAG*SAACPG
Trigger: TCCTGGACAAGCTGCACTCCACCCGGCAGCACCTGC...CCTGCAGCTCACCGGGTTAGCCGTGGCACCGTTGGGACCTCCCACCAGGACTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp CTGGTGGGAGGTCCCAACGGTGCCACGGCTAACCCGGTGAGCTGCAGGGACAAGTCGGGTCCCCGAGTGTaGCTGGCGACACTGGGCATG +
Preference number: 4 (lower is better)
Translates to: LVGGPNGATANPVSCRDKSGPRV*LATLGM
Trigger: CATGCCCAGTGTCGCCAGCCACACTCGGGGACCCGA...CTTGTCCCTGCAGCTCACCGGGTTAGCCGTGGCACCGTTGGGACCTCCCACCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR TCA 90 bp GGAGTCCTGGTGGGAGGTCCCAACGGTGCCACGGCTAACCCGGTGAGCTGCAGGGTGTGTGTTCGTCAATaGGCCGCCGAGAGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: GVLVGGPNGATANPVSCRVCVRQ*AAESPP
Trigger: TGGAGGGCTCTCGGCGGCTCATTGACGAACACACAC...CCTGCAGCTCACCGGGTTAGCCGTGGCACCGTTGGGACCTCCCACCAGGACTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp GGAGTCCTGGTGGGAGGTCCCAACGGTGCCACGGCTAACCCGGTGAGCTGCAGGGGGCTCAGGGGCCGCTaGAGCACATCAAGTAGTGCT +
Preference number: 4 (lower is better)
Translates to: GVLVGGPNGATANPVSCRGLRGR*STSSSA
Trigger: AGCACTACTTGATGTGCTGCAGCGGCCCCTGAGCCC...CCTGCAGCTCACCGGGTTAGCCGTGGCACCGTTGGGACCTCCCACCAGGACTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp GGAGTCCTGGTGGGAGGTCCCAACGGTGCCACGGCTAACCCGGTGAGCTGCAGGTCAAAGAGGAACAAGTaGCGCTCCCGCCCCTTCCGG +
Preference number: 4 (lower is better)
Translates to: GVLVGGPNGATANPVSCRSKRNK*RSRPFR
Trigger: CCGGAAGGGGCGGGAGCGGCACTTGTTCCTCTTTGA...CCTGCAGCTCACCGGGTTAGCCGTGGCACCGTTGGGACCTCCCACCAGGACTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp CTGGTGGGAGGTCCCAACGGTGCCACGGCTAACCCGGTGAGCTGCAGGGACAAGTTGGGCACCAGGCTCTaGAAGTCAGCACTGCCCGGG +
Preference number: 4 (lower is better)
Translates to: LVGGPNGATANPVSCRDKLGTRL*KSALPG
Trigger: CCCGGGCAGTGCTGACTTCCAGAGCCTGGTGCCCAA...CTTGTCCCTGCAGCTCACCGGGTTAGCCGTGGCACCGTTGGGACCTCCCACCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp CTGGTGGGAGGTCCCAACGGTGCCACGGCTAACCCGGTGAGCTGCAGGGACAAGGCAGGTGCTGCCGGGTaGAGTGCAGCTTGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: LVGGPNGATANPVSCRDKAGAAG*SAACPG
Trigger: TCCTGGACAAGCTGCACTCCACCCGGCAGCACCTGC...CTTGTCCCTGCAGCTCACCGGGTTAGCCGTGGCACCGTTGGGACCTCCCACCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp GGAGTCCTGGTGGGAGGTCCCAACGGTGCCACGGCTAACCCGGTGAGCTGCAGGGGCTCGCACACAGCCTaGTCTAAGCAAATGCCTGCC +
Preference number: 4 (lower is better)
Translates to: GVLVGGPNGATANPVSCRGSHTA*SKQMPA
Trigger: GGCAGGCATTTGCTTAGAGCAGGCTGTGTGCGAGCC...CCTGCAGCTCACCGGGTTAGCCGTGGCACCGTTGGGACCTCCCACCAGGACTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp GGAGTCCTGGTGGGAGGTCCCAACGGTGCCACGGCTAACCCGGTGAGCTGCAGGGCACGAAGTCTTGGATaGGCACCTCCAGGTGTCGAG +
Preference number: 4 (lower is better)
Translates to: GVLVGGPNGATANPVSCRARSLG*APPGVE
Trigger: CTCGACACCTGGAGGTGCGCATCCAAGACTTCGTGC...CCTGCAGCTCACCGGGTTAGCCGTGGCACCGTTGGGACCTCCCACCAGGACTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp GGAGTCCTGGTGGGAGGTCCCAACGGTGCCACGGCTAACCCGGTGAGCTGCAGGGGCGCTGACCTGAGCTaGTGGATAAGGTCTTCGCCT +
Preference number: 4 (lower is better)
Translates to: GVLVGGPNGATANPVSCRGADLS*WIRSSP
Trigger: AGGCGAAGACCTTATCCAGCAGCTCAGGTCAGCGCC...CCTGCAGCTCACCGGGTTAGCCGTGGCACCGTTGGGACCTCCCACCAGGACTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp GGAGTCCTGGTGGGAGGTCCCAACGGTGCCACGGCTAACCCGGTGAGCTGCAGGGAGCCTGGGCGTACCTaGTGTTCTGAGTGGGATCTG +
Preference number: 4 (lower is better)
Translates to: GVLVGGPNGATANPVSCREPGRT*CSEWDL
Trigger: CAGATCCCACTCAGAACAGCAGGTACGCCCAGGCTC...CCTGCAGCTCACCGGGTTAGCCGTGGCACCGTTGGGACCTCCCACCAGGACTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp GGGGGAAGTACATTGGGCCATTGGGCCTCTCACAGGTCCCTACTGCCCCACCATCAGAGCTGCAGCCGCTaGTGGAGCCGCACCTTGCGG +
Preference number: 4 (lower is better)
Translates to: GGSTLGHWASHRSLLPHHQSCSR*WSRTLR
Trigger: CCGCAAGGTGCGGCTCCACCAGCGGCTGCAGCTCTG...ATGGTGGGGCAGTAGGGACCTGTGAGAGGCCCAATGGCCCAATGTACTTCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR TCA 90 bp GGCAGCAGGAGCCTGGGCGTACCTGCTGTTCTGAGTGGGATCTGGGGGAAGTACGAGGCCGGAATCACTTaGCGCTGGGCTCGCACACAG +
Preference number: 4 (lower is better)
Translates to: GSRSLGVPAVLSGIWGKYEAGIT*RWARTQ
Trigger: CTGTGTGCGAGCCCAGCGTCAAGTGATTCCGGCCTC...GTACTTCCCCCAGATCCCACTCAGAACAGCAGGTACGCCCAGGCTCCTGCTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR TCA 90 bp GGCAGCAGGAGCCTGGGCGTACCTGCTGTTCTGAGTGGGATCTGGGGGAAGTACGATGCAGTTGCGTCCTaGGAAGCCGTCGCTGCAGCG +
Preference number: 4 (lower is better)
Translates to: GSRSLGVPAVLSGIWGKYDAVAS*EAVAAA
Trigger: CGCTGCAGCGACGGCTTCTCAGGACGCAACTGCATC...GTACTTCCCCCAGATCCCACTCAGAACAGCAGGTACGCCCAGGCTCCTGCTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR TCA 90 bp GGAGTCCTGGTGGGAGGTCCCAACGGTGCCACGGCTAACCCGGTGAGCTGCAGGGCTGGCGTTGAGCATTaGCTCTCCATTGCGGATCCA +
Preference number: 4 (lower is better)
Translates to: GVLVGGPNGATANPVSCRAGVEH*LSIADP
Trigger: TGGATCCGCAATGGAGAGTCAATGCTCAACGCCAGC...CCTGCAGCTCACCGGGTTAGCCGTGGCACCGTTGGGACCTCCCACCAGGACTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR TCA 90 bp GGAGTCCTGGTGGGAGGTCCCAACGGTGCCACGGCTAACCCGGTGAGCTGCAGGTCCGCTTCTCTTCATTaGCTTCGTGGTTGGCGTCCC +
Preference number: 4 (lower is better)
Translates to: GVLVGGPNGATANPVSCRSASLH*LRGWRP
Trigger: GGGACGCCAACCACGAAGTCAATGAAGAGAAGCGGA...CCTGCAGCTCACCGGGTTAGCCGTGGCACCGTTGGGACCTCCCACCAGGACTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR TCA 90 bp GGGGGAAGTACATTGGGCCATTGGGCCTCTCACAGGTCCCTACTGCCCCACCATCCACGGCTAACCCGGTaGGCTGCAGGGACAAGTCCC +
Preference number: 4 (lower is better)
Translates to: GGSTLGHWASHRSLLPHHPRLTR*AAGTSP
Trigger: GGGACTTGTCCCTGCAGCTCACCGGGTTAGCCGTGG...ATGGTGGGGCAGTAGGGACCTGTGAGAGGCCCAATGGCCCAATGTACTTCCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR TCA 90 bp CTGGTGGGAGGTCCCAACGGTGCCACGGCTAACCCGGTGAGCTGCAGGGACAAGCTCAAGAGAGGTGGGTaGTTGGAGTCCTGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: LVGGPNGATANPVSCRDKLKRGG*LESWWE
Trigger: CTCCCACCAGGACTCCAATCACCCACCTCTCTTGAG...CTTGTCCCTGCAGCTCACCGGGTTAGCCGTGGCACCGTTGGGACCTCCCACCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp CTGGTGGGAGGTCCCAACGGTGCCACGGCTAACCCGGTGAGCTGCAGGGACAAGTCTGGAAGTCAGCACTaGCCGGGATGCAGTTGCGTC +
Preference number: 4 (lower is better)
Translates to: LVGGPNGATANPVSCRDKSGSQH*PGCSCV
Trigger: GACGCAACTGCATCCCGGGCAGTGCTGACTTCCAGA...CTTGTCCCTGCAGCTCACCGGGTTAGCCGTGGCACCGTTGGGACCTCCCACCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp GGAGTCCTGGTGGGAGGTCCCAACGGTGCCACGGCTAACCCGGTGAGCTGCAGGACCTGCTGTACATCCTaGTGGAAGACGCAGAGCTGC +
Preference number: 4 (lower is better)
Translates to: GVLVGGPNGATANPVSCRTCCTS*WKTQSC
Trigger: GCAGCTCTGCGTCTTCCAGCAGGATGTACAGCAGGT...CCTGCAGCTCACCGGGTTAGCCGTGGCACCGTTGGGACCTCCCACCAGGACTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp CTGGTGGGAGGTCCCAACGGTGCCACGGCTAACCCGGTGAGCTGCAGGGACAAGAGCACCTCGGCTTTCTaGTGTACCTGCAGGGCACTC +
Preference number: 4 (lower is better)
Translates to: LVGGPNGATANPVSCRDKSTSAF*CTCRAL
Trigger: GAGTGCCCTGCAGGTACAGCAGAAAGCCGAGGTGCT...CTTGTCCCTGCAGCTCACCGGGTTAGCCGTGGCACCGTTGGGACCTCCCACCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp GGAGTCCTGGTGGGAGGTCCCAACGGTGCCACGGCTAACCCGGTGAGCTGCAGGACGCGATTCTCCCTCTaGAGGAGCTCACTCAGGATG +
Preference number: 4 (lower is better)
Translates to: GVLVGGPNGATANPVSCRTRFSL*RSSLRM
Trigger: CATCCTGAGTGAGCTCCTGCAGAGGGAGAATCGCGT...CCTGCAGCTCACCGGGTTAGCCGTGGCACCGTTGGGACCTCCCACCAGGACTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp CTGGTGGGAGGTCCCAACGGTGCCACGGCTAACCCGGTGAGCTGCAGGGACAAGGCTAACCCGGTGAGCTaGAGGGACAAGTCCCAGGAT +
Preference number: 4 (lower is better)
Translates to: LVGGPNGATANPVSCRDKANPVS*RDKSQD
Trigger: ATCCTGGGACTTGTCCCTGCAGCTCACCGGGTTAGC...CTTGTCCCTGCAGCTCACCGGGTTAGCCGTGGCACCGTTGGGACCTCCCACCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp GGAGTCCTGGTGGGAGGTCCCAACGGTGCCACGGCTAACCCGGTGAGCTGCAGGTGCTCAGCCTTCTGGTaGAACACAGCAGACATGGCG +
Preference number: 4 (lower is better)
Translates to: GVLVGGPNGATANPVSCRCSAFW*NTADMA
Trigger: CGCCATGTCTGCTGTGTTCCACCAGAAGGCTGAGCA...CCTGCAGCTCACCGGGTTAGCCGTGGCACCGTTGGGACCTCCCACCAGGACTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp CTGGTGGGAGGTCCCAACGGTGCCACGGCTAACCCGGTGAGCTGCAGGGACAAGCAGCACATTCCCGGATaGCATCGGCATCGTAGTGGC +
Preference number: 4 (lower is better)
Translates to: LVGGPNGATANPVSCRDKQHIPG*HRHRSG
Trigger: GCCACTACGATGCCGATGCCATCCGGGAATGTGCTG...CTTGTCCCTGCAGCTCACCGGGTTAGCCGTGGCACCGTTGGGACCTCCCACCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp GGGGGAAGTACATTGGGCCATTGGGCCTCTCACAGGTCCCTACTGCCCCACCATTCGGGTCCCCGAGTGTaGCTGGCGACACTGGGCATG +
Preference number: 4 (lower is better)
Translates to: GGSTLGHWASHRSLLPHHSGPRV*LATLGM
Trigger: CATGCCCAGTGTCGCCAGCCACACTCGGGGACCCGA...ATGGTGGGGCAGTAGGGACCTGTGAGAGGCCCAATGGCCCAATGTACTTCCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR TCA 90 bp GGAGTCCTGGTGGGAGGTCCCAACGGTGCCACGGCTAACCCGGTGAGCTGCAGGGGAAGATGTCCAGCTTaGTCTTCCGCTCGTGGAACA +
Preference number: 4 (lower is better)
Translates to: GVLVGGPNGATANPVSCRGRCPA*SSARGT
Trigger: TGTTCCACGAGCGGAAGATCAAGCTGGACATCTTCC...CCTGCAGCTCACCGGGTTAGCCGTGGCACCGTTGGGACCTCCCACCAGGACTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR TCA 90 bp GGAGTCCTGGTGGGAGGTCCCAACGGTGCCACGGCTAACCCGGTGAGCTGCAGGTGCTCTAGCCGCTTATaGGTCTGCTCTGCATTGAGC +
Preference number: 4 (lower is better)
Translates to: GVLVGGPNGATANPVSCRCSSRL*VCSALS
Trigger: GCTCAATGCAGAGCAGACTCATAAGCGGCTAGAGCA...CCTGCAGCTCACCGGGTTAGCCGTGGCACCGTTGGGACCTCCCACCAGGACTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp GGCAGCAGGAGCCTGGGCGTACCTGCTGTTCTGAGTGGGATCTGGGGGAAGTACCTGAGAAGCCGTCGCTaGAGCGGATGCACTGCAGCA +
Preference number: 4 (lower is better)
Translates to: GSRSLGVPAVLSGIWGKYLRSRR*SGCTAA
Trigger: TGCTGCAGTGCATCCGCTGCAGCGACGGCTTCTCAG...GTACTTCCCCCAGATCCCACTCAGAACAGCAGGTACGCCCAGGCTCCTGCTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp GGGGGAAGTACATTGGGCCATTGGGCCTCTCACAGGTCCCTACTGCCCCACCATTGCCCGGGATGCAGTTaGGTCCTGAGAAGCCGTCGC +
Preference number: 4 (lower is better)
Translates to: GGSTLGHWASHRSLLPHHCPGCS*VLRSRR
Trigger: GCGACGGCTTCTCAGGACGCAACTGCATCCCGGGCA...ATGGTGGGGCAGTAGGGACCTGTGAGAGGCCCAATGGCCCAATGTACTTCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp GGAGTCCTGGTGGGAGGTCCCAACGGTGCCACGGCTAACCCGGTGAGCTGCAGGGCAGACCACCTTCACTaGACATCTTGCACCAGGCAT +
Preference number: 4 (lower is better)
Translates to: GVLVGGPNGATANPVSCRADHLH*TSCTRH
Trigger: ATGCCTGGTGCAAGATGTGCAGTGAAGGTGGTCTGC...CCTGCAGCTCACCGGGTTAGCCGTGGCACCGTTGGGACCTCCCACCAGGACTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp GGCAGCAGGAGCCTGGGCGTACCTGCTGTTCTGAGTGGGATCTGGGGGAAGTACTCCGCTGCTCCACCCTaGGCACGAAGTCTTGGATGC +
Preference number: 4 (lower is better)
Translates to: GSRSLGVPAVLSGIWGKYSAAPP*ARSLGC
Trigger: GCATCCAAGACTTCGTGCGCAGGGTGGAGCAGCGGA...GTACTTCCCCCAGATCCCACTCAGAACAGCAGGTACGCCCAGGCTCCTGCTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp CTGGTGGGAGGTCCCAACGGTGCCACGGCTAACCCGGTGAGCTGCAGGGACAAGTGGGCATCATCAAGCTaGTGCAGGACCGACTCGATG +
Preference number: 4 (lower is better)
Translates to: LVGGPNGATANPVSCRDKWASSS*CRTDSM
Trigger: CATCGAGTCGGTCCTGCAGCAGCTTGATGATGCCCA...CTTGTCCCTGCAGCTCACCGGGTTAGCCGTGGCACCGTTGGGACCTCCCACCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp CTGGTGGGAGGTCCCAACGGTGCCACGGCTAACCCGGTGAGCTGCAGGGACAAGTCCGTGATGTACTGGTaGAGATCCTGTCCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: LVGGPNGATANPVSCRDKSVMYW*RSCPCW
Trigger: CCAGCAGGGACAGGATCTGCACCAGTACATCACGGA...CTTGTCCCTGCAGCTCACCGGGTTAGCCGTGGCACCGTTGGGACCTCCCACCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp CTGGTGGGAGGTCCCAACGGTGCCACGGCTAACCCGGTGAGCTGCAGGGACAAGATGGTCGATCTCTGCTaGTGGCCCCAGCTTATCTCG +
Preference number: 4 (lower is better)
Translates to: LVGGPNGATANPVSCRDKMVDLC*WPQLIS
Trigger: CGAGATAAGCTGGGGCCAGCAGCAGAGATCGACCAT...CTTGTCCCTGCAGCTCACCGGGTTAGCCGTGGCACCGTTGGGACCTCCCACCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp GGCAGCAGGAGCCTGGGCGTACCTGCTGTTCTGAGTGGGATCTGGGGGAAGTACTGTCTGAGGATGGGGTaGGCCCAGACCACAAGGCGA +
Preference number: 4 (lower is better)
Translates to: GSRSLGVPAVLSGIWGKYCLRMG*AQTTRR
Trigger: TCGCCTTGTGGTCTGGGCGCACCCCATCCTCAGACA...GTACTTCCCCCAGATCCCACTCAGAACAGCAGGTACGCCCAGGCTCCTGCTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp GGCAGCAGGAGCCTGGGCGTACCTGCTGTTCTGAGTGGGATCTGGGGGAAGTACTGGTGTCTGGTTGGCTaGTCCCATCCCCCTGGCTGT +
Preference number: 4 (lower is better)
Translates to: GSRSLGVPAVLSGIWGKYWCLVG*SHPPGC
Trigger: ACAGCCAGGGGGATGGGAGCAGCCAACCAGACACCA...GTACTTCCCCCAGATCCCACTCAGAACAGCAGGTACGCCCAGGCTCCTGCTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp CTGGTGGGAGGTCCCAACGGTGCCACGGCTAACCCGGTGAGCTGCAGGGACAAGTACCAGAGATACCACTaGTCCCAGAAGCGGTCCGTC +
Preference number: 4 (lower is better)
Translates to: LVGGPNGATANPVSCRDKYQRYH*SQKRSV
Trigger: GACGGACCGCTTCTGGGACCAGTGGTATCTCTGGTA...CTTGTCCCTGCAGCTCACCGGGTTAGCCGTGGCACCGTTGGGACCTCCCACCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp CTGGTGGGAGGTCCCAACGGTGCCACGGCTAACCCGGTGAGCTGCAGGGACAAGGGGGTGTTTTGTTGTTaGACACAGCCGAGTCCCTGG +
Preference number: 4 (lower is better)
Translates to: LVGGPNGATANPVSCRDKGVFCC*TQPSPW
Trigger: CCAGGGACTCGGCTGTGTCCAACAACAAAACACCCC...CTTGTCCCTGCAGCTCACCGGGTTAGCCGTGGCACCGTTGGGACCTCCCACCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp CTGGTGGGAGGTCCCAACGGTGCCACGGCTAACCCGGTGAGCTGCAGGGACAAGTCCTCCATCTGCACCTaGGCATCATCAAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: LVGGPNGATANPVSCRDKSSICT*ASSSCC
Trigger: GCAGCAGCTTGATGATGCCCAGGTGCAGATGGAGGA...CTTGTCCCTGCAGCTCACCGGGTTAGCCGTGGCACCGTTGGGACCTCCCACCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp GGAGTCCTGGTGGGAGGTCCCAACGGTGCCACGGCTAACCCGGTGAGCTGCAGGATGAGGGGAATGACATaGTCGATCTCTGCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: GVLVGGPNGATANPVSCRMRGMT*SISAAG
Trigger: GCCAGCAGCAGAGATCGACCATGTCATTCCCCTCAT...CCTGCAGCTCACCGGGTTAGCCGTGGCACCGTTGGGACCTCCCACCAGGACTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp GGAGTCCTGGTGGGAGGTCCCAACGGTGCCACGGCTAACCCGGTGAGCTGCAGGCTCTGTGTTTGGGGTTaGGGCTCTCTCTTGAGTGTG +
Preference number: 4 (lower is better)
Translates to: GVLVGGPNGATANPVSCRLCVWG*GSLLSV
Trigger: CACACTCAAGAGAGAGCCCCAACCCCAAACACAGAG...CCTGCAGCTCACCGGGTTAGCCGTGGCACCGTTGGGACCTCCCACCAGGACTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp CTGGTGGGAGGTCCCAACGGTGCCACGGCTAACCCGGTGAGCTGCAGGGACAAGGGTGCGTCTTCTCGATaGCCAGTTGGAACTGCTCGT +
Preference number: 4 (lower is better)
Translates to: LVGGPNGATANPVSCRDKGASSR*PVGTAR
Trigger: ACGAGCAGTTCCAACTGGCCATCGAGAAGACGCACC...CTTGTCCCTGCAGCTCACCGGGTTAGCCGTGGCACCGTTGGGACCTCCCACCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460856.5
CDS-3UTR TCA 90 bp GGCAGCAGGAGCCTGGGCGTACCTGCTGTTCTGAGTGGGATCTGGGGGAAGTACGGTCCACCAGCTTTGTaGGGCCCTCCACAGATACCA +
Preference number: 4 (lower is better)
Translates to: GSRSLGVPAVLSGIWGKYGPPAL*GPPQIP
Trigger: TGGTATCTGTGGAGGGCCTCACAAAGCTGGTGGACC...GTACTTCCCCCAGATCCCACTCAGAACAGCAGGTACGCCCAGGCTCCTGCTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR TCA 90 bp CTGGTGGGAGGTCCCAACGGTGCCACGGCTAACCCGGTGAGCTGCAGGGACAAGCACTGTTTTATTGTCTaGGGATGGGGTGCGCCCAGA +
Preference number: 4 (lower is better)
Translates to: LVGGPNGATANPVSCRDKHCFIV*GWGAPR
Trigger: TCTGGGCGCACCCCATCCTCAGACAATAAAACAGTG...CTTGTCCCTGCAGCTCACCGGGTTAGCCGTGGCACCGTTGGGACCTCCCACCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp TGGAGAGAAGCTCAGCAACCTCGAATTGCACCCAGTAGAGAAGAAGGGAGCCCCCTGCAGCGGATGCACTaGAGCAGCCGCTGCCCCTCC +
Preference number: 4 (lower is better)
Translates to: WREAQQPRIAPSREEGSPLQRMH*SSRCPS
Trigger: GGAGGGGCAGCGGCTGCTGCAGTGCATCCGCTGCAG...GGGGCTCCCTTCTTCTCTACTGGGTGCAATTCGAGGTTGCTGAGCTTCTCTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp TGGAGAGAAGCTCAGCAACCTCGAATTGCACCCAGTAGAGAAGAAGGGAGCCCCCGTCGCTGCAGCGGATaGACTGCAGCAGCCGCTGCC +
Preference number: 4 (lower is better)
Translates to: WREAQQPRIAPSREEGSPRRCSG*TAAAAA
Trigger: GGCAGCGGCTGCTGCAGTGCATCCGCTGCAGCGACG...GGGGCTCCCTTCTTCTCTACTGGGTGCAATTCGAGGTTGCTGAGCTTCTCTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp GGGGGAAGTACATTGGGCCATTGGGCCTCTCACAGGTCCCTACTGCCCCACCATCAGCACTGCCCGGGATaGAGTTGCGTCCTGAGAAGC +
Preference number: 4 (lower is better)
Translates to: GGSTLGHWASHRSLLPHHQHCPG*SCVLRS
Trigger: GCTTCTCAGGACGCAACTGCATCCCGGGCAGTGCTG...ATGGTGGGGCAGTAGGGACCTGTGAGAGGCCCAATGGCCCAATGTACTTCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp GGCAGCAGGAGCCTGGGCGTACCTGCTGTTCTGAGTGGGATCTGGGGGAAGTACCTCCAGGTGTCGAGCTaGCTTGTAGATCTCCTCGGG +
Preference number: 4 (lower is better)
Translates to: GSRSLGVPAVLSGIWGKYLQVSS*LVDLLG
Trigger: CCCGAGGAGATCTACAAGGCAGCTCGACACCTGGAG...GTACTTCCCCCAGATCCCACTCAGAACAGCAGGTACGCCCAGGCTCCTGCTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp GGCAGCAGGAGCCTGGGCGTACCTGCTGTTCTGAGTGGGATCTGGGGGAAGTACGGCGCTGACCTGAGCTaGTGGATAAGGTCTTCGCCT +
Preference number: 4 (lower is better)
Translates to: GSRSLGVPAVLSGIWGKYGADLS*WIRSSP
Trigger: AGGCGAAGACCTTATCCAGCAGCTCAGGTCAGCGCC...GTACTTCCCCCAGATCCCACTCAGAACAGCAGGTACGCCCAGGCTCCTGCTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp GGAGTCCTGGTGGGAGGTCCCAACGGTGCCACGGCTAACCCGGTGAGCTGCAGGACCTCGATGGTGTACTaGTCAAAGATGCGCAGTTGC +
Preference number: 4 (lower is better)
Translates to: GVLVGGPNGATANPVSCRTSMVY*SKMRSC
Trigger: GCAACTGCGCATCTTTGAGCAGTACACCATCGAGGT...CCTGCAGCTCACCGGGTTAGCCGTGGCACCGTTGGGACCTCCCACCAGGACTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp GGCAGCAGGAGCCTGGGCGTACCTGCTGTTCTGAGTGGGATCTGGGGGAAGTACTGCAGGGCACTCTGGTaGGTCTTCTCGATGGCCAGT +
Preference number: 4 (lower is better)
Translates to: GSRSLGVPAVLSGIWGKYCRALW*VFSMAS
Trigger: ACTGGCCATCGAGAAGACGCACCAGAGTGCCCTGCA...GTACTTCCCCCAGATCCCACTCAGAACAGCAGGTACGCCCAGGCTCCTGCTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460856.5
CDS-3UTR CCA 90 bp CTGGTGGGAGGTCCCAACGGTGCCACGGCTAACCCGGTGAGCTGCAGGGACAAGAAGGTCTGGTGGTGGTaGATTGCCAGCTCTAGGTCT +
Preference number: 4 (lower is better)
Translates to: LVGGPNGATANPVSCRDKKVWWW*IASSRS
Trigger: AGACCTAGAGCTGGCAATCCACCACCACCAGACCTT...CTTGTCCCTGCAGCTCACCGGGTTAGCCGTGGCACCGTTGGGACCTCCCACCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp CTGGTGGGAGGTCCCAACGGTGCCACGGCTAACCCGGTGAGCTGCAGGGACAAGTGCTCATACAAGGTCTaGTGGTGGTGGATTGCCAGC +
Preference number: 4 (lower is better)
Translates to: LVGGPNGATANPVSCRDKCSYKV*WWWIAS
Trigger: GCTGGCAATCCACCACCACCAGACCTTGTATGAGCA...CTTGTCCCTGCAGCTCACCGGGTTAGCCGTGGCACCGTTGGGACCTCCCACCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp TGGAGAGAAGCTCAGCAACCTCGAATTGCACCCAGTAGAGAAGAAGGGAGCCCCACACAGCCGAGTCCCTaGCCTCGCTGGGCTCCCCGA +
Preference number: 4 (lower is better)
Translates to: WREAQQPRIAPSREEGSPTQPSP*PRWAPR
Trigger: TCGGGGAGCCCAGCGAGGCCAGGGACTCGGCTGTGT...GGGGCTCCCTTCTTCTCTACTGGGTGCAATTCGAGGTTGCTGAGCTTCTCTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp GGCAGCAGGAGCCTGGGCGTACCTGCTGTTCTGAGTGGGATCTGGGGGAAGTACAGCTTCCGTTCTGTGTaGCGCTGCAGCCGCTGTTCT +
Preference number: 4 (lower is better)
Translates to: GSRSLGVPAVLSGIWGKYSFRSV*RCSRCS
Trigger: AGAACAGCGGCTGCAGCGCCACACAGAACGGAAGCT...GTACTTCCCCCAGATCCCACTCAGAACAGCAGGTACGCCCAGGCTCCTGCTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp GGCAGCAGGAGCCTGGGCGTACCTGCTGTTCTGAGTGGGATCTGGGGGAAGTACCAGCACATTCCCGGATaGCATCGGCATCGTAGTGGC +
Preference number: 4 (lower is better)
Translates to: GSRSLGVPAVLSGIWGKYQHIPG*HRHRSG
Trigger: GCCACTACGATGCCGATGCCATCCGGGAATGTGCTG...GTACTTCCCCCAGATCCCACTCAGAACAGCAGGTACGCCCAGGCTCCTGCTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp CTGGTGGGAGGTCCCAACGGTGCCACGGCTAACCCGGTGAGCTGCAGGGACAAGAGGAAGAGATGGAGTTaGCCAGACCATGCCGCTGTT +
Preference number: 4 (lower is better)
Translates to: LVGGPNGATANPVSCRDKRKRWS*PDHAAV
Trigger: AACAGCGGCATGGTCTGGCCAACTCCATCTCTTCCT...CTTGTCCCTGCAGCTCACCGGGTTAGCCGTGGCACCGTTGGGACCTCCCACCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp GGGGGAAGTACATTGGGCCATTGGGCCTCTCACAGGTCCCTACTGCCCCACCATGAGATGGTGTCTGGTTaGCTGCTCCCATCCCCCTGG +
Preference number: 4 (lower is better)
Translates to: GGSTLGHWASHRSLLPHHEMVSG*LLPSPW
Trigger: CCAGGGGGATGGGAGCAGCCAACCAGACACCATCTC...ATGGTGGGGCAGTAGGGACCTGTGAGAGGCCCAATGGCCCAATGTACTTCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp GGAGTCCTGGTGGGAGGTCCCAACGGTGCCACGGCTAACCCGGTGAGCTGCAGGCGCGCTAAACGTAAGTaGAGAAAGGATCTCCAGGTC +
Preference number: 4 (lower is better)
Translates to: GVLVGGPNGATANPVSCRRAKRK*RKDLQV
Trigger: GACCTGGAGATCCTTTCTCCACTTACGTTTAGCGCG...CCTGCAGCTCACCGGGTTAGCCGTGGCACCGTTGGGACCTCCCACCAGGACTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp CTGGTGGGAGGTCCCAACGGTGCCACGGCTAACCCGGTGAGCTGCAGGGACAAGGTTCTGAGTGGGATCTaGGGGAAGTACATTGGGCCA +
Preference number: 4 (lower is better)
Translates to: LVGGPNGATANPVSCRDKVLSGI*GKYIGP
Trigger: TGGCCCAATGTACTTCCCCCAGATCCCACTCAGAAC...CTTGTCCCTGCAGCTCACCGGGTTAGCCGTGGCACCGTTGGGACCTCCCACCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR TCA 90 bp CTGGTGGGAGGTCCCAACGGTGCCACGGCTAACCCGGTGAGCTGCAGGGACAAGGCTTGGCAGGCACCCTaGATTCCCCATATTCTTTCA +
Preference number: 4 (lower is better)
Translates to: LVGGPNGATANPVSCRDKAWQAP*IPHILS
Trigger: TGAAAGAATATGGGGAATTCAGGGTGCCTGCCAAGC...CTTGTCCCTGCAGCTCACCGGGTTAGCCGTGGCACCGTTGGGACCTCCCACCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR TCA 90 bp GGGGGAAGTACATTGGGCCATTGGGCCTCTCACAGGTCCCTACTGCCCCACCATCTCAAGAGAGGTGGGTaGTTGGAGTCCTGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: GGSTLGHWASHRSLLPHHLKRGG*LESWWE
Trigger: CTCCCACCAGGACTCCAATCACCCACCTCTCTTGAG...ATGGTGGGGCAGTAGGGACCTGTGAGAGGCCCAATGGCCCAATGTACTTCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp GGCAGCAGGAGCCTGGGCGTACCTGCTGTTCTGAGTGGGATCTGGGGGAAGTACCTTCACTGCACATCTTaGACCAGGCATCCACTCCCG +
Preference number: 4 (lower is better)
Translates to: GSRSLGVPAVLSGIWGKYLHCTS*TRHPLP
Trigger: CGGGAGTGGATGCCTGGTGCAAGATGTGCAGTGAAG...GTACTTCCCCCAGATCCCACTCAGAACAGCAGGTACGCCCAGGCTCCTGCTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp GGGGGAAGTACATTGGGCCATTGGGCCTCTCACAGGTCCCTACTGCCCCACCATTCATCATGCCTCTTCTaGAGGGCCCGGGCTCGATGT +
Preference number: 4 (lower is better)
Translates to: GGSTLGHWASHRSLLPHHSSCLF*RARARC
Trigger: ACATCGAGCCCGGGCCCTGCAGAAGAGGCATGATGA...ATGGTGGGGCAGTAGGGACCTGTGAGAGGCCCAATGGCCCAATGTACTTCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp CTGGTGGGAGGTCCCAACGGTGCCACGGCTAACCCGGTGAGCTGCAGGGACAAGTGCTGCTGCTGGAACTaGTTGATCAGTTCCTGGACT +
Preference number: 4 (lower is better)
Translates to: LVGGPNGATANPVSCRDKCCCWN*LISSWT
Trigger: AGTCCAGGAACTGATCAAGCAGTTCCAGCAGCAGCA...CTTGTCCCTGCAGCTCACCGGGTTAGCCGTGGCACCGTTGGGACCTCCCACCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp GGCAGCAGGAGCCTGGGCGTACCTGCTGTTCTGAGTGGGATCTGGGGGAAGTACTCTAGAGTGGCGGTCTaGTGCTGCTGGAACTGCTTG +
Preference number: 4 (lower is better)
Translates to: GSRSLGVPAVLSGIWGKYSRVAV*CCWNCL
Trigger: CAAGCAGTTCCAGCAGCAGCAGACCGCCACTCTAGA...GTACTTCCCCCAGATCCCACTCAGAACAGCAGGTACGCCCAGGCTCCTGCTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp CTGGTGGGAGGTCCCAACGGTGCCACGGCTAACCCGGTGAGCTGCAGGGACAAGTTCAAGGTCCAGAAATaGAGCACGCGATTCTCCCTC +
Preference number: 4 (lower is better)
Translates to: LVGGPNGATANPVSCRDKFKVQK*STRFSL
Trigger: GAGGGAGAATCGCGTGCTGCATTTCTGGACCTTGAA...CTTGTCCCTGCAGCTCACCGGGTTAGCCGTGGCACCGTTGGGACCTCCCACCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp CTGGTGGGAGGTCCCAACGGTGCCACGGCTAACCCGGTGAGCTGCAGGGACAAGACATCCTCAGGCAGTTaGTCGTACTTCTCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: LVGGPNGATANPVSCRDKTSSGS*SYFSSS
Trigger: AGAGCTGGAGAAGTACGAGCAACTGCCTGAGGATGT...CTTGTCCCTGCAGCTCACCGGGTTAGCCGTGGCACCGTTGGGACCTCCCACCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp CTGGTGGGAGGTCCCAACGGTGCCACGGCTAACCCGGTGAGCTGCAGGGACAAGGAGTTGGCCAGACCATaGCGCTGTTGTATCTCATCA +
Preference number: 4 (lower is better)
Translates to: LVGGPNGATANPVSCRDKELARP*RCCISS
Trigger: TGATGAGATACAACAGCGGCATGGTCTGGCCAACTC...CTTGTCCCTGCAGCTCACCGGGTTAGCCGTGGCACCGTTGGGACCTCCCACCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp GGCAGCAGGAGCCTGGGCGTACCTGCTGTTCTGAGTGGGATCTGGGGGAAGTACACCACAAGGCGAATTTaGAGGGATCGCCCTCCACGT +
Preference number: 4 (lower is better)
Translates to: GSRSLGVPAVLSGIWGKYTTRRI*RDRPPR
Trigger: ACGTGGAGGGCGATCCCTGCAAATTCGCCTTGTGGT...GTACTTCCCCCAGATCCCACTCAGAACAGCAGGTACGCCCAGGCTCCTGCTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp CTGGTGGGAGGTCCCAACGGTGCCACGGCTAACCCGGTGAGCTGCAGGGACAAGACCGAGGAACAAGGTTaGCATCCTTGTCACTGTCCA +
Preference number: 4 (lower is better)
Translates to: LVGGPNGATANPVSCRDKTEEQG*HPCHCP
Trigger: TGGACAGTGACAAGGATGGCAACCTTGTTCCTCGGT...CTTGTCCCTGCAGCTCACCGGGTTAGCCGTGGCACCGTTGGGACCTCCCACCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp GGGGGAAGTACATTGGGCCATTGGGCCTCTCACAGGTCCCTACTGCCCCACCATTCTCCAGGTCCCAGGTaGCACCGAGGAACAAGGTTG +
Preference number: 4 (lower is better)
Translates to: GGSTLGHWASHRSLLPHHSPGPR*HRGTRL
Trigger: CAACCTTGTTCCTCGGTGGCACCTGGGACCTGGAGA...ATGGTGGGGCAGTAGGGACCTGTGAGAGGCCCAATGGCCCAATGTACTTCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp GGAGTCCTGGTGGGAGGTCCCAACGGTGCCACGGCTAACCCGGTGAGCTGCAGGCTCACAGGTCCCTACTaGCCCACCATTTTAGACTTT +
Preference number: 4 (lower is better)
Translates to: GVLVGGPNGATANPVSCRLTGPY*PTILDF
Trigger: AAAGTCTAAAATGGTGGGGCAGTAGGGACCTGTGAG...CCTGCAGCTCACCGGGTTAGCCGTGGCACCGTTGGGACCTCCCACCAGGACTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp GGAGTCCTGGTGGGAGGTCCCAACGGTGCCACGGCTAACCCGGTGAGCTGCAGGATCTCCGTGTGGCTCTaGAGGAATAACTCCTTGTTG +
Preference number: 4 (lower is better)
Translates to: GVLVGGPNGATANPVSCRISVWL*RNNSLL
Trigger: CAACAAGGAGTTATTCCTCCAGAGCCACACGGAGAT...CCTGCAGCTCACCGGGTTAGCCGTGGCACCGTTGGGACCTCCCACCAGGACTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp GGGGGAAGTACATTGGGCCATTGGGCCTCTCACAGGTCCCTACTGCCCCACCATCAGACATGGCGAGGATaGTGCTGCGTTCATCCAGGG +
Preference number: 4 (lower is better)
Translates to: GGSTLGHWASHRSLLPHHQTWRG*CCVHPG
Trigger: CCCTGGATGAACGCAGCACCATCCTCGCCATGTCTG...ATGGTGGGGCAGTAGGGACCTGTGAGAGGCCCAATGGCCCAATGTACTTCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp GGCAGCAGGAGCCTGGGCGTACCTGCTGTTCTGAGTGGGATCTGGGGGAAGTACGGAACACAGCAGACATaGCGAGGATGGTGCTGCGTT +
Preference number: 4 (lower is better)
Translates to: GSRSLGVPAVLSGIWGKYGTQQT*RGWCCV
Trigger: AACGCAGCACCATCCTCGCCATGTCTGCTGTGTTCC...GTACTTCCCCCAGATCCCACTCAGAACAGCAGGTACGCCCAGGCTCCTGCTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp CTGGTGGGAGGTCCCAACGGTGCCACGGCTAACCCGGTGAGCTGCAGGGACAAGTCATACAAGGTCTGGTaGTGGTGGATTGCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: LVGGPNGATANPVSCRDKSYKVW*WWIASS
Trigger: AGAGCTGGCAATCCACCACCACCAGACCTTGTATGA...CTTGTCCCTGCAGCTCACCGGGTTAGCCGTGGCACCGTTGGGACCTCCCACCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp CTGGTGGGAGGTCCCAACGGTGCCACGGCTAACCCGGTGAGCTGCAGGGACAAGTCAATTCCTGATGCCTaGACCTCCGTGATGTACTGG +
Preference number: 4 (lower is better)
Translates to: LVGGPNGATANPVSCRDKSIPDA*TSVMYW
Trigger: CCAGTACATCACGGAGGTCCAGGCATCAGGAATTGA...CTTGTCCCTGCAGCTCACCGGGTTAGCCGTGGCACCGTTGGGACCTCCCACCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp GGCAGCAGGAGCCTGGGCGTACCTGCTGTTCTGAGTGGGATCTGGGGGAAGTACCTGGGGGAAGTACATTaGGCCATTGGGCCTCTCACA +
Preference number: 4 (lower is better)
Translates to: GSRSLGVPAVLSGIWGKYLGEVH*AIGPLT
Trigger: TGTGAGAGGCCCAATGGCCCAATGTACTTCCCCCAG...GTACTTCCCCCAGATCCCACTCAGAACAGCAGGTACGCCCAGGCTCCTGCTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR TCA 90 bp GGCAGCAGGAGCCTGGGCGTACCTGCTGTTCTGAGTGGGATCTGGGGGAAGTACATCCCAGAACCTGTTTaGCTTCAGCCTGGAGGTGAC +
Preference number: 4 (lower is better)
Translates to: GSRSLGVPAVLSGIWGKYIPEPV*LQPGGD
Trigger: GTCACCTCCAGGCTGAAGTCAAACAGGTTCTGGGAT...GTACTTCCCCCAGATCCCACTCAGAACAGCAGGTACGCCCAGGCTCCTGCTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR TCA 90 bp GGAGTCCTGGTGGGAGGTCCCAACGGTGCCACGGCTAACCCGGTGAGCTGCAGGTATTATCCTCTGTGTTaGCTCCTAGGGCTTTCTCCA +
Preference number: 4 (lower is better)
Translates to: GVLVGGPNGATANPVSCRYYPLC*LLGLSP
Trigger: TGGAGAAAGCCCTAGGAGTCAACACAGAGGATAATA...CCTGCAGCTCACCGGGTTAGCCGTGGCACCGTTGGGACCTCCCACCAGGACTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR TCA 90 bp ATTCAGGTCATCCACAGTGGACAGAACAGAACTTGCCAAGCTGGACTTTATGGAGGCGCCAGCCCGGGGTaGGAGCGCGGCGGGAAGGAA +
Preference number: 4 (lower is better)
Translates to: IQVIHSGQNRTCQAGLYGGASPG*ERGGKE
Trigger: TTCCTTCCCGCCGCGCTCTCACCCCGGGCTGGCGCC...TCCATAAAGTCCAGCTTGGCAAGTTCTGTTCTGTCCACTGTGGATGACCTGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR GCA 90 bp GGCAGCAGGAGCCTGGGCGTACCTGCTGTTCTGAGTGGGATCTGGGGGAAGTACCCTGCTCTAAGCAAATaGCTGCCTGCAAAGACAGCC +
Preference number: 4 (lower is better)
Translates to: GSRSLGVPAVLSGIWGKYPALSK*LPAKTA
Trigger: GGCTGTCTTTGCAGGCAGGCATTTGCTTAGAGCAGG...GTACTTCCCCCAGATCCCACTCAGAACAGCAGGTACGCCCAGGCTCCTGCTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp CCCCATAACCCAGCCAGGGAAATAAGCCCAACTTCAGGACCTCTCAGAAATCAGCTGCAGCGGATGCACTaGAGCAGCCGCTGCCCCTCC +
Preference number: 4 (lower is better)
Translates to: PHNPAREISPTSGPLRNQLQRMH*SSRCPS
Trigger: GGAGGGGCAGCGGCTGCTGCAGTGCATCCGCTGCAG...CTGATTTCTGAGAGGTCCTGAAGTTGGGCTTATTTCCCTGGCTGGGTTATGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp GGGGGAAGTACATTGGGCCATTGGGCCTCTCACAGGTCCCTACTGCCCCACCATACTCCCGACAGGAACTaGTCAGCCTTCTGGTGGAAC +
Preference number: 4 (lower is better)
Translates to: GGSTLGHWASHRSLLPHHTPDRN*SAFWWN
Trigger: GTTCCACCAGAAGGCTGAGCAGTTCCTGTCGGGAGT...ATGGTGGGGCAGTAGGGACCTGTGAGAGGCCCAATGGCCCAATGTACTTCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp GGGGGAAGTACATTGGGCCATTGGGCCTCTCACAGGTCCCTACTGCCCCACCATGCCAGCTCTAGGTCTTaGATCTCGGATGGCAGACCA +
Preference number: 4 (lower is better)
Translates to: GGSTLGHWASHRSLLPHHASSRS*ISDGRP
Trigger: TGGTCTGCCATCCGAGATGCAAGACCTAGAGCTGGC...ATGGTGGGGCAGTAGGGACCTGTGAGAGGCCCAATGGCCCAATGTACTTCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp TGGAGAGAAGCTCAGCAACCTCGAATTGCACCCAGTAGAGAAGAAGGGAGCCCCAGCCGCACCTTGCGGTaGTGCCAGATGCTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: WREAQQPRIAPSREEGSPSRTLR*CQMLSS
Trigger: GCTGGAGAGCATCTGGCAGCACCGCAAGGTGCGGCT...GGGGCTCCCTTCTTCTCTACTGGGTGCAATTCGAGGTTGCTGAGCTTCTCTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp GGCAGCAGGAGCCTGGGCGTACCTGCTGTTCTGAGTGGGATCTGGGGGAAGTACTCTTCAAAGTCATCATaGCTCTTCTGCAGGGCCCGG +
Preference number: 4 (lower is better)
Translates to: GSRSLGVPAVLSGIWGKYSSKSS*LFCRAR
Trigger: CCGGGCCCTGCAGAAGAGGCATGATGACTTTGAAGA...GTACTTCCCCCAGATCCCACTCAGAACAGCAGGTACGCCCAGGCTCCTGCTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp GGAGTCCTGGTGGGAGGTCCCAACGGTGCCACGGCTAACCCGGTGAGCTGCAGGTGTACTGCTCAAAGATaGGCAGTTGCAGGAAGATGT +
Preference number: 4 (lower is better)
Translates to: GVLVGGPNGATANPVSCRCTAQR*AVAGRC
Trigger: ACATCTTCCTGCAACTGCGCATCTTTGAGCAGTACA...CCTGCAGCTCACCGGGTTAGCCGTGGCACCGTTGGGACCTCCCACCAGGACTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp GGGGGAAGTACATTGGGCCATTGGGCCTCTCACAGGTCCCTACTGCCCCACCATGACATGGTCGATCTCTaGTGCTGGCCCCAGCTTATC +
Preference number: 4 (lower is better)
Translates to: GGSTLGHWASHRSLLPHHDMVDL*CWPQLI
Trigger: GATAAGCTGGGGCCAGCAGCAGAGATCGACCATGTC...ATGGTGGGGCAGTAGGGACCTGTGAGAGGCCCAATGGCCCAATGTACTTCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp CTGGTGGGAGGTCCCAACGGTGCCACGGCTAACCCGGTGAGCTGCAGGGACAAGTCGAACACCACATATTaGTGGCATTGGTCTAACCGC +
Preference number: 4 (lower is better)
Translates to: LVGGPNGATANPVSCRDKSNTTY*WHWSNR
Trigger: GCGGTTAGACCAATGCCAGCAATATGTGGTGTTCGA...CTTGTCCCTGCAGCTCACCGGGTTAGCCGTGGCACCGTTGGGACCTCCCACCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp TGGAGAGAAGCTCAGCAACCTCGAATTGCACCCAGTAGAGAAGAAGGGAGCCCCGGATCGCCCTCCACGTaGTCGGTCACACCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: WREAQQPRIAPSREEGSPGSPST*SVTPSS
Trigger: AGAGCTGGGTGTGACCGAGCACGTGGAGGGCGATCC...GGGGCTCCCTTCTTCTCTACTGGGTGCAATTCGAGGTTGCTGAGCTTCTCTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp CTGGTGGGAGGTCCCAACGGTGCCACGGCTAACCCGGTGAGCTGCAGGGACAAGCTCACAGGTCCCTACTaGCCCACCATTTTAGACTTT +
Preference number: 4 (lower is better)
Translates to: LVGGPNGATANPVSCRDKLTGPY*PTILDF
Trigger: AAAGTCTAAAATGGTGGGGCAGTAGGGACCTGTGAG...CTTGTCCCTGCAGCTCACCGGGTTAGCCGTGGCACCGTTGGGACCTCCCACCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp GGCAGCAGGAGCCTGGGCGTACCTGCTGTTCTGAGTGGGATCTGGGGGAAGTACCCTCACTTGGCACGCTaGCCAAATACGTCACGAGTT +
Preference number: 4 (lower is better)
Translates to: GSRSLGVPAVLSGIWGKYPHLAR*PNTSRV
Trigger: AACTCGTGACGTATTTGGCCAGCGTGCCAAGTGAGG...GTACTTCCCCCAGATCCCACTCAGAACAGCAGGTACGCCCAGGCTCCTGCTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp GGGGGAAGTACATTGGGCCATTGGGCCTCTCACAGGTCCCTACTGCCCCACCATGCACACGTCCTCACTTaGCACGCTGGCCAAATACGT +
Preference number: 4 (lower is better)
Translates to: GGSTLGHWASHRSLLPHHAHVLT*HAGQIR
Trigger: ACGTATTTGGCCAGCGTGCCAAGTGAGGACGTGTGC...ATGGTGGGGCAGTAGGGACCTGTGAGAGGCCCAATGGCCCAATGTACTTCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp GGGGGAAGTACATTGGGCCATTGGGCCTCTCACAGGTCCCTACTGCCCCACCATAAGCTCTTCCACTCCTaGTCCAGCTGGGTGGAGATC +
Preference number: 4 (lower is better)
Translates to: GGSTLGHWASHRSLLPHHKLFHS*SSWVEI
Trigger: GATCTCCACCCAGCTGGACCAGGAGTGGAAGAGCTT...ATGGTGGGGCAGTAGGGACCTGTGAGAGGCCCAATGGCCCAATGTACTTCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp GGCAGCAGGAGCCTGGGCGTACCTGCTGTTCTGAGTGGGATCTGGGGGAAGTACTACAAGGTCTGGTGGTaGTGGATTGCCAGCTCTAGG +
Preference number: 4 (lower is better)
Translates to: GSRSLGVPAVLSGIWGKYYKVWW*WIASSR
Trigger: CCTAGAGCTGGCAATCCACCACCACCAGACCTTGTA...GTACTTCCCCCAGATCCCACTCAGAACAGCAGGTACGCCCAGGCTCCTGCTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp GGCAGGCTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGCAGAGCTGCAGCCGCTaGTGGAGCCGCACCTTGCGG +
Preference number: 4 (lower is better)
Translates to: GRLSFQNNSELPVNLRGAQSCSR*WSRTLR
Trigger: CCGCAAGGTGCGGCTCCACCAGCGGCTGCAGCTCTG...CGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAGCCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp GGCAGGCTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGACACAGCCGAGTCCCTaGCCTCGCTGGGCTCCCCGA +
Preference number: 4 (lower is better)
Translates to: GRLSFQNNSELPVNLRGATQPSP*PRWAPR
Trigger: TCGGGGAGCCCAGCGAGGCCAGGGACTCGGCTGTGT...CGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAGCCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp GGGGGAAGTACATTGGGCCATTGGGCCTCTCACAGGTCCCTACTGCCCCACCATACCTCCGTGATGTACTaGTGCAGATCCTGTCCCTGC +
Preference number: 4 (lower is better)
Translates to: GGSTLGHWASHRSLLPHHTSVMY*CRSCPC
Trigger: GCAGGGACAGGATCTGCACCAGTACATCACGGAGGT...ATGGTGGGGCAGTAGGGACCTGTGAGAGGCCCAATGGCCCAATGTACTTCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp GGAGTCCTGGTGGGAGGTCCCAACGGTGCCACGGCTAACCCGGTGAGCTGCAGGAATAACTCTTGCACCTaGGCTGCCAGATCAATGTCT +
Preference number: 4 (lower is better)
Translates to: GVLVGGPNGATANPVSCRNNSCT*AARSMS
Trigger: AGACATTGATCTGGCAGCCCAGGTGCAAGAGTTATT...CCTGCAGCTCACCGGGTTAGCCGTGGCACCGTTGGGACCTCCCACCAGGACTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp CTGGTGGGAGGTCCCAACGGTGCCACGGCTAACCCGGTGAGCTGCAGGGACAAGAATTCACCTGTTTCTTaGATCCAGTCAAGCGCCTGC +
Preference number: 4 (lower is better)
Translates to: LVGGPNGATANPVSCRDKNSPVS*IQSSAC
Trigger: GCAGGCGCTTGACTGGATCCAAGAAACAGGTGAATT...CTTGTCCCTGCAGCTCACCGGGTTAGCCGTGGCACCGTTGGGACCTCCCACCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp GGCAGCAGGAGCCTGGGCGTACCTGCTGTTCTGAGTGGGATCTGGGGGAAGTACAGTACATTGGGCCATTaGGCCTCTCACAGGTCCCTA +
Preference number: 4 (lower is better)
Translates to: GSRSLGVPAVLSGIWGKYSTLGH*ASHRSL
Trigger: TAGGGACCTGTGAGAGGCCCAATGGCCCAATGTACT...GTACTTCCCCCAGATCCCACTCAGAACAGCAGGTACGCCCAGGCTCCTGCTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR TCA 90 bp GGCAGCAGGAGCCTGGGCGTACCTGCTGTTCTGAGTGGGATCTGGGGGAAGTACTCTTTCAGCAGTTCCTaGGTCTCCTCTGTGGTCTCT +
Preference number: 4 (lower is better)
Translates to: GSRSLGVPAVLSGIWGKYSFSSS*VSSVVS
Trigger: AGAGACCACAGAGGAGACTCAGGAACTGCTGAAAGA...GTACTTCCCCCAGATCCCACTCAGAACAGCAGGTACGCCCAGGCTCCTGCTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR TCA 90 bp GGCAGCAGGAGCCTGGGCGTACCTGCTGTTCTGAGTGGGATCTGGGGGAAGTACCTGTCCACTGTGTTCTaGGAGGTCCTAGAAGCAATG +
Preference number: 4 (lower is better)
Translates to: GSRSLGVPAVLSGIWGKYLSTVF*EVLEAM
Trigger: CATTGCTTCTAGGACCTCTCAGAACACAGTGGACAG...GTACTTCCCCCAGATCCCACTCAGAACAGCAGGTACGCCCAGGCTCCTGCTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp GGGGGAAGTACATTGGGCCATTGGGCCTCTCACAGGTCCCTACTGCCCCACCATCCTGCTCTAAGCAAATaGCTGCCTGCAAAGACAGCC +
Preference number: 4 (lower is better)
Translates to: GGSTLGHWASHRSLLPHHPALSK*LPAKTA
Trigger: GGCTGTCTTTGCAGGCAGGCATTTGCTTAGAGCAGG...ATGGTGGGGCAGTAGGGACCTGTGAGAGGCCCAATGGCCCAATGTACTTCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp AAACTCTGTGTTTGGGGTTGGGGCTCTCTCTTGAGTGTGTTGGAAACTGGAGGACGTCGCTGCAGCGGATaGACTGCAGCAGCCGCTGCC +
Preference number: 4 (lower is better)
Translates to: KLCVWGWGSLLSVLETGGRRCSG*TAAAAA
Trigger: GGCAGCGGCTGCTGCAGTGCATCCGCTGCAGCGACG...TCCTCCAGTTTCCAACACACTCAAGAGAGAGCCCCAACCCCAAACACAGAGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp TGGAGAGAAGCTCAGCAACCTCGAATTGCACCCAGTAGAGAAGAAGGGAGCCCCTGCTGCCGGGTGGAGTaGAGCTTGTCCAGGAGACTG +
Preference number: 4 (lower is better)
Translates to: WREAQQPRIAPSREEGSPCCRVE*SLSRRL
Trigger: CAGTCTCCTGGACAAGCTGCACTCCACCCGGCAGCA...GGGGCTCCCTTCTTCTCTACTGGGTGCAATTCGAGGTTGCTGAGCTTCTCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp GGCAGCAGGAGCCTGGGCGTACCTGCTGTTCTGAGTGGGATCTGGGGGAAGTACTGCAGATCCTGTCCCTaGTGGATAACCTCAAAGGTC +
Preference number: 4 (lower is better)
Translates to: GSRSLGVPAVLSGIWGKYCRSCP*WITSKV
Trigger: GACCTTTGAGGTTATCCAGCAGGGACAGGATCTGCA...GTACTTCCCCCAGATCCCACTCAGAACAGCAGGTACGCCCAGGCTCCTGCTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp GGAGTCCTGGTGGGAGGTCCCAACGGTGCCACGGCTAACCCGGTGAGCTGCAGGAGCTCCAATTCATGCTaGTTCTCATGGAGAAATTCC +
Preference number: 4 (lower is better)
Translates to: GVLVGGPNGATANPVSCRSSNSC*FSWRNS
Trigger: GGAATTTCTCCATGAGAAGCAGCATGAATTGGAGCT...CCTGCAGCTCACCGGGTTAGCCGTGGCACCGTTGGGACCTCCCACCAGGACTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp TGGAGAGAAGCTCAGCAACCTCGAATTGCACCCAGTAGAGAAGAAGGGAGCCCCTCAAAGAGGAACAAGTaGCGCTCCCGCCCCTTCCGG +
Preference number: 4 (lower is better)
Translates to: WREAQQPRIAPSREEGSPSKRNK*RSRPFR
Trigger: CCGGAAGGGGCGGGAGCGGCACTTGTTCCTCTTTGA...GGGGCTCCCTTCTTCTCTACTGGGTGCAATTCGAGGTTGCTGAGCTTCTCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp GGGGGAAGTACATTGGGCCATTGGGCCTCTCACAGGTCCCTACTGCCCCACCATCAGGCGGGGAGATTTTaGTTGGAACATGTTGCCCTC +
Preference number: 4 (lower is better)
Translates to: GGSTLGHWASHRSLLPHHQAGRF*LEHVAL
Trigger: GAGGGCAACATGTTCCAAGCAAAATCTCCCCGCCTG...ATGGTGGGGCAGTAGGGACCTGTGAGAGGCCCAATGGCCCAATGTACTTCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp GGCAGGCTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGCGGGCTAGCATCTCCTaGAGGTCCTCGAGGCGCGAG +
Preference number: 4 (lower is better)
Translates to: GRLSFQNNSELPVNLRGARASIS*RSSRRE
Trigger: CTCGCGCCTCGAGGACCTCCAGGAGATGCTAGCCCG...CGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAGCCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp GGGGGAAGTACATTGGGCCATTGGGCCTCTCACAGGTCCCTACTGCCCCACCATGTCTTGCATCTCGGATaGCAGACCACCTTCACTGCA +
Preference number: 4 (lower is better)
Translates to: GGSTLGHWASHRSLLPHHVLHLG*QTTFTA
Trigger: TGCAGTGAAGGTGGTCTGCCATCCGAGATGCAAGAC...ATGGTGGGGCAGTAGGGACCTGTGAGAGGCCCAATGGCCCAATGTACTTCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp GGCAGCAGGAGCCTGGGCGTACCTGCTGTTCTGAGTGGGATCTGGGGGAAGTACTCATACAAGGTCTGGTaGTGGTGGATTGCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: GSRSLGVPAVLSGIWGKYSYKVW*WWIASS
Trigger: AGAGCTGGCAATCCACCACCACCAGACCTTGTATGA...GTACTTCCCCCAGATCCCACTCAGAACAGCAGGTACGCCCAGGCTCCTGCTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp CTGGTGGGAGGTCCCAACGGTGCCACGGCTAACCCGGTGAGCTGCAGGGACAAGAGGTCATGTTGTTCATaGCTAGCTTCCGTTCTGTGT +
Preference number: 4 (lower is better)
Translates to: LVGGPNGATANPVSCRDKRSCCS*LASVLC
Trigger: ACACAGAACGGAAGCTAGCCATGAACAACATGACCT...CTTGTCCCTGCAGCTCACCGGGTTAGCCGTGGCACCGTTGGGACCTCCCACCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp GGCAGCAGGAGCCTGGGCGTACCTGCTGTTCTGAGTGGGATCTGGGGGAAGTACTCAATTCCTGATGCCTaGACCTCCGTGATGTACTGG +
Preference number: 4 (lower is better)
Translates to: GSRSLGVPAVLSGIWGKYSIPDA*TSVMYW
Trigger: CCAGTACATCACGGAGGTCCAGGCATCAGGAATTGA...GTACTTCCCCCAGATCCCACTCAGAACAGCAGGTACGCCCAGGCTCCTGCTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp CTGGTGGGAGGTCCCAACGGTGCCACGGCTAACCCGGTGAGCTGCAGGGACAAGCTGACGTTGTTCCTGTaGATGTACTTGAGAAACACC +
Preference number: 4 (lower is better)
Translates to: LVGGPNGATANPVSCRDKLTLFL*MYLRNT
Trigger: GGTGTTTCTCAAGTACATCCACAGGAACAACGTCAG...CTTGTCCCTGCAGCTCACCGGGTTAGCCGTGGCACCGTTGGGACCTCCCACCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp GGCAGCAGGAGCCTGGGCGTACCTGCTGTTCTGAGTGGGATCTGGGGGAAGTACAACACCACATATTGCTaGCATTGGTCTAACCGCCGC +
Preference number: 4 (lower is better)
Translates to: GSRSLGVPAVLSGIWGKYNTTYC*HWSNRR
Trigger: GCGGCGGTTAGACCAATGCCAGCAATATGTGGTGTT...GTACTTCCCCCAGATCCCACTCAGAACAGCAGGTACGCCCAGGCTCCTGCTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp GGCAGGCTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGAACCAGGCCGCTCGCTaGGCCGCTCCAGCAGCTCTA +
Preference number: 4 (lower is better)
Translates to: GRLSFQNNSELPVNLRGANQAAR*AAPAAL
Trigger: TAGAGCTGCTGGAGCGGCCCAGCGAGCGGCCTGGTT...CGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAGCCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp GGCAGGCTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGGAGGCCGGAATCACTTaGCGCTGGGCTCGCACACAG +
Preference number: 4 (lower is better)
Translates to: GRLSFQNNSELPVNLRGAEAGIT*RWARTQ
Trigger: CTGTGTGCGAGCCCAGCGTCAAGTGATTCCGGCCTC...CGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAGCCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360013.7
CDS-3UTR TCA 90 bp CCCCATAACCCAGCCAGGGAAATAAGCCCAACTTCAGGACCTCTCAGAAATCAGTCATCCCACCACCGCTaGCTCGAGGAGGCCGGAATC +
Preference number: 4 (lower is better)
Translates to: PHNPAREISPTSGPLRNQSSHHR*LEEAGI
Trigger: GATTCCGGCCTCCTCGAGTCAGCGGTGGTGGGATGA...CTGATTTCTGAGAGGTCCTGAAGTTGGGCTTATTTCCCTGGCTGGGTTATGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR TCA 90 bp TGGAGAGAAGCTCAGCAACCTCGAATTGCACCCAGTAGAGAAGAAGGGAGCCCCGGTCCACCAGCTTTGTaGGGCCCTCCACAGATACCA +
Preference number: 4 (lower is better)
Translates to: WREAQQPRIAPSREEGSPGPPAL*GPPQIP
Trigger: TGGTATCTGTGGAGGGCCTCACAAAGCTGGTGGACC...GGGGCTCCCTTCTTCTCTACTGGGTGCAATTCGAGGTTGCTGAGCTTCTCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR TCA 90 bp GGCAGGCTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGGGGCGTACTGGTAGCTaGCTCCGATCTCCGTGTGGC +
Preference number: 4 (lower is better)
Translates to: GRLSFQNNSELPVNLRGAGRTGS*LRSPCG
Trigger: GCCACACGGAGATCGGAGTCAGCTACCAGTACGCCC...CGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAGCCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp GGCAGGCTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGCCGACTCGATGTGGCTaGTGGAGCTGCTGTGGGGTG +
Preference number: 4 (lower is better)
Translates to: GRLSFQNNSELPVNLRGAPTRCG*WSCCGV
Trigger: CACCCCACAGCAGCTCCATCAGCCACATCGAGTCGG...CGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAGCCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp GGGGGAAGTACATTGGGCCATTGGGCCTCTCACAGGTCCCTACTGCCCCACCATAGGCCACAGAGGCATTaGCCAATTTTAGCCGGTCTT +
Preference number: 4 (lower is better)
Translates to: GGSTLGHWASHRSLLPHHRPQRH*PILAGL
Trigger: AAGACCGGCTAAAATTGGTCAATGCCTCTGTGGCCT...ATGGTGGGGCAGTAGGGACCTGTGAGAGGCCCAATGGCCCAATGTACTTCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR TCA 90 bp GGGGGAAGTACATTGGGCCATTGGGCCTCTCACAGGTCCCTACTGCCCCACCATAAGCTATCGGCCAGCTaGATCAGAAGCTTCACCTTC +
Preference number: 4 (lower is better)
Translates to: GGSTLGHWASHRSLLPHHKLSAS*IRSFTF
Trigger: GAAGGTGAAGCTTCTGATTCAGCTGGCCGATAGCTT...ATGGTGGGGCAGTAGGGACCTGTGAGAGGCCCAATGGCCCAATGTACTTCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR TCA 90 bp GGGGGAAGTACATTGGGCCATTGGGCCTCTCACAGGTCCCTACTGCCCCACCATCTGTCCACTGTGTTCTaGGAGGTCCTAGAAGCAATG +
Preference number: 4 (lower is better)
Translates to: GGSTLGHWASHRSLLPHHLSTVF*EVLEAM
Trigger: CATTGCTTCTAGGACCTCTCAGAACACAGTGGACAG...ATGGTGGGGCAGTAGGGACCTGTGAGAGGCCCAATGGCCCAATGTACTTCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR TCA 90 bp AAACTCTGTGTTTGGGGTTGGGGCTCTCTCTTGAGTGTGTTGGAAACTGGAGGACCACGGCTAACCCGGTaGGCTGCAGGGACAAGTCCC +
Preference number: 4 (lower is better)
Translates to: KLCVWGWGSLLSVLETGGPRLTR*AAGTSP
Trigger: GGGACTTGTCCCTGCAGCTCACCGGGTTAGCCGTGG...TCCTCCAGTTTCCAACACACTCAAGAGAGAGCCCCAACCCCAAACACAGAGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR TCA 90 bp TGGAGAGAAGCTCAGCAACCTCGAATTGCACCCAGTAGAGAAGAAGGGAGCCCCGACCTCGGGAGGGAGTaGGGTTATGGAGGAGCTAGA +
Preference number: 4 (lower is better)
Translates to: WREAQQPRIAPSREEGSPDLGRE*GYGGAR
Trigger: TCTAGCTCCTCCATAACCTCACTCCCTCCCGAGGTC...GGGGCTCCCTTCTTCTCTACTGGGTGCAATTCGAGGTTGCTGAGCTTCTCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp TGGAGAGAAGCTCAGCAACCTCGAATTGCACCCAGTAGAGAAGAAGGGAGCCCCTCTGGAAGTCAGCACTaGCCGGGATGCAGTTGCGTC +
Preference number: 4 (lower is better)
Translates to: WREAQQPRIAPSREEGSPSGSQH*PGCSCV
Trigger: GACGCAACTGCATCCCGGGCAGTGCTGACTTCCAGA...GGGGCTCCCTTCTTCTCTACTGGGTGCAATTCGAGGTTGCTGAGCTTCTCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp TGGAGAGAAGCTCAGCAACCTCGAATTGCACCCAGTAGAGAAGAAGGGAGCCCCACATGGCGAGGATGGTaGTGCGTTCATCCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: WREAQQPRIAPSREEGSPTWRGW*CVHPGQ
Trigger: CTGCCCTGGATGAACGCAGCACCATCCTCGCCATGT...GGGGCTCCCTTCTTCTCTACTGGGTGCAATTCGAGGTTGCTGAGCTTCTCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp GGGGGAAGTACATTGGGCCATTGGGCCTCTCACAGGTCCCTACTGCCCCACCATACCTCGATGGTGTACTaGTCAAAGATGCGCAGTTGC +
Preference number: 4 (lower is better)
Translates to: GGSTLGHWASHRSLLPHHTSMVY*SKMRSC
Trigger: GCAACTGCGCATCTTTGAGCAGTACACCATCGAGGT...ATGGTGGGGCAGTAGGGACCTGTGAGAGGCCCAATGGCCCAATGTACTTCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp CCCCATAACCCAGCCAGGGAAATAAGCCCAACTTCAGGACCTCTCAGAAATCAGCGTTCTGTGTGGCGCTaGAGCCGCTGTTCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: PHNPAREISPTSGPLRNQRSVWR*SRCSAR
Trigger: CCTGGCAGAACAGCGGCTGCAGCGCCACACAGAACG...CTGATTTCTGAGAGGTCCTGAAGTTGGGCTTATTTCCCTGGCTGGGTTATGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp TGGAGAGAAGCTCAGCAACCTCGAATTGCACCCAGTAGAGAAGAAGGGAGCCCCTTCAGCATGAGCTGCTaGCAGTGGAGGGCCACCTTC +
Preference number: 4 (lower is better)
Translates to: WREAQQPRIAPSREEGSPFSMSC*QWRATF
Trigger: GAAGGTGGCCCTCCACTGGCAGCAGCTCATGCTGAA...GGGGCTCCCTTCTTCTCTACTGGGTGCAATTCGAGGTTGCTGAGCTTCTCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp AAACTCTGTGTTTGGGGTTGGGGCTCTCTCTTGAGTGTGTTGGAAACTGGAGGACGGGCTAGCATCTCCTaGAGGTCCTCGAGGCGCGAG +
Preference number: 4 (lower is better)
Translates to: KLCVWGWGSLLSVLETGGRASIS*RSSRRE
Trigger: CTCGCGCCTCGAGGACCTCCAGGAGATGCTAGCCCG...TCCTCCAGTTTCCAACACACTCAAGAGAGAGCCCCAACCCCAAACACAGAGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp CCCCATAACCCAGCCAGGGAAATAAGCCCAACTTCAGGACCTCTCAGAAATCAGTTGGGCACCAGGCTCTaGAAGTCAGCACTGCCCGGG +
Preference number: 4 (lower is better)
Translates to: PHNPAREISPTSGPLRNQLGTRL*KSALPG
Trigger: CCCGGGCAGTGCTGACTTCCAGAGCCTGGTGCCCAA...CTGATTTCTGAGAGGTCCTGAAGTTGGGCTTATTTCCCTGGCTGGGTTATGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp TGGAGAGAAGCTCAGCAACCTCGAATTGCACCCAGTAGAGAAGAAGGGAGCCCCAGCTTCCGTTCTGTGTaGCGCTGCAGCCGCTGTTCT +
Preference number: 4 (lower is better)
Translates to: WREAQQPRIAPSREEGSPSFRSV*RCSRCS
Trigger: AGAACAGCGGCTGCAGCGCCACACAGAACGGAAGCT...GGGGCTCCCTTCTTCTCTACTGGGTGCAATTCGAGGTTGCTGAGCTTCTCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp TGGAGAGAAGCTCAGCAACCTCGAATTGCACCCAGTAGAGAAGAAGGGAGCCCCGTCGATCTCTGCTGCTaGCCCCAGCTTATCTCGTCC +
Preference number: 4 (lower is better)
Translates to: WREAQQPRIAPSREEGSPVDLCC*PQLISS
Trigger: GGACGAGATAAGCTGGGGCCAGCAGCAGAGATCGAC...GGGGCTCCCTTCTTCTCTACTGGGTGCAATTCGAGGTTGCTGAGCTTCTCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp GGCAGCAGGAGCCTGGGCGTACCTGCTGTTCTGAGTGGGATCTGGGGGAAGTACACATATTGCTGGCATTaGTCTAACCGCCGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: GSRSLGVPAVLSGIWGKYTYCWH*SNRRFF
Trigger: GAAGAAGCGGCGGTTAGACCAATGCCAGCAATATGT...GTACTTCCCCCAGATCCCACTCAGAACAGCAGGTACGCCCAGGCTCCTGCTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp GGCAGCAGGAGCCTGGGCGTACCTGCTGTTCTGAGTGGGATCTGGGGGAAGTACAATTCACCTGTTTCTTaGATCCAGTCAAGCGCCTGC +
Preference number: 4 (lower is better)
Translates to: GSRSLGVPAVLSGIWGKYNSPVS*IQSSAC
Trigger: GCAGGCGCTTGACTGGATCCAAGAAACAGGTGAATT...GTACTTCCCCCAGATCCCACTCAGAACAGCAGGTACGCCCAGGCTCCTGCTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp GGCAGCAGGAGCCTGGGCGTACCTGCTGTTCTGAGTGGGATCTGGGGGAAGTACATCCGAAAGGCTTGCTaGGATAATATCCAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: GSRSLGVPAVLSGIWGKYIRKAC*DNIQLQ
Trigger: CTGGAGCTGGATATTATCCCAGCAAGCCTTTCGGAT...GTACTTCCCCCAGATCCCACTCAGAACAGCAGGTACGCCCAGGCTCCTGCTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp GGGGGAAGTACATTGGGCCATTGGGCCTCTCACAGGTCCCTACTGCCCCACCATTTAGGTAGGAAGAGATaGAGTTGGCCAGACCATGCC +
Preference number: 4 (lower is better)
Translates to: GGSTLGHWASHRSLLPHHLGRKR*SWPDHA
Trigger: GGCATGGTCTGGCCAACTCCATCTCTTCCTACCTAA...ATGGTGGGGCAGTAGGGACCTGTGAGAGGCCCAATGGCCCAATGTACTTCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp TGGAGAGAAGCTCAGCAACCTCGAATTGCACCCAGTAGAGAAGAAGGGAGCCCCAGAGAGGTGGGTGATTaGAGTCCTGGTGGGAGGTCC +
Preference number: 4 (lower is better)
Translates to: WREAQQPRIAPSREEGSPREVGD*SPGGRS
Trigger: GGACCTCCCACCAGGACTCCAATCACCCACCTCTCT...GGGGCTCCCTTCTTCTCTACTGGGTGCAATTCGAGGTTGCTGAGCTTCTCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp GGGGGAAGTACATTGGGCCATTGGGCCTCTCACAGGTCCCTACTGCCCCACCATACCTGCTGTTCTGAGTaGGATCTGGGGGAAGTACAT +
Preference number: 4 (lower is better)
Translates to: GGSTLGHWASHRSLLPHHTCCSE*DLGEVH
Trigger: ATGTACTTCCCCCAGATCCCACTCAGAACAGCAGGT...ATGGTGGGGCAGTAGGGACCTGTGAGAGGCCCAATGGCCCAATGTACTTCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp CTGGTGGGAGGTCCCAACGGTGCCACGGCTAACCCGGTGAGCTGCAGGGACAAGGTTGTTGCCAGTGTTTaGGAAAGGCTAAAGTTAACC +
Preference number: 4 (lower is better)
Translates to: LVGGPNGATANPVSCRDKVVASV*ERLKLT
Trigger: GGTTAACTTTAGCCTTTCCCAAACACTGGCAACAAC...CTTGTCCCTGCAGCTCACCGGGTTAGCCGTGGCACCGTTGGGACCTCCCACCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp GGGGGAAGTACATTGGGCCATTGGGCCTCTCACAGGTCCCTACTGCCCCACCATCTCTGCCTCTTGCCTTaGTGTGGGGTTTCCATGAAA +
Preference number: 4 (lower is better)
Translates to: GGSTLGHWASHRSLLPHHLCLLP*CGVSMK
Trigger: TTTCATGGAAACCCCACACCAAGGCAAGAGGCAGAG...ATGGTGGGGCAGTAGGGACCTGTGAGAGGCCCAATGGCCCAATGTACTTCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp GGCAGGCTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGGATGCTGCAAGCATGTaGCTGCTGTGGGCCGCCTCC +
Preference number: 4 (lower is better)
Translates to: GRLSFQNNSELPVNLRGADAASM*LLWAAS
Trigger: GGAGGCGGCCCACAGCAGCCACATGCTTGCAGCATC...CGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAGCCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp CCCCATAACCCAGCCAGGGAAATAAGCCCAACTTCAGGACCTCTCAGAAATCAGGTGTGTGTTCGTCAATaGGCCGCCGAGAGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: PHNPAREISPTSGPLRNQVCVRQ*AAESPP
Trigger: TGGAGGGCTCTCGGCGGCTCATTGACGAACACACAC...CTGATTTCTGAGAGGTCCTGAAGTTGGGCTTATTTCCCTGGCTGGGTTATGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR TCA 90 bp AAACTCTGTGTTTGGGGTTGGGGCTCTCTCTTGAGTGTGTTGGAAACTGGAGGAGGGCGTACTGGTAGCTaGCTCCGATCTCCGTGTGGC +
Preference number: 4 (lower is better)
Translates to: KLCVWGWGSLLSVLETGGGRTGS*LRSPCG
Trigger: GCCACACGGAGATCGGAGTCAGCTACCAGTACGCCC...TCCTCCAGTTTCCAACACACTCAAGAGAGAGCCCCAACCCCAAACACAGAGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR TCA 90 bp AAACTCTGTGTTTGGGGTTGGGGCTCTCTCTTGAGTGTGTTGGAAACTGGAGGACCGACTCGATGTGGCTaGTGGAGCTGCTGTGGGGTG +
Preference number: 4 (lower is better)
Translates to: KLCVWGWGSLLSVLETGGPTRCG*WSCCGV
Trigger: CACCCCACAGCAGCTCCATCAGCCACATCGAGTCGG...TCCTCCAGTTTCCAACACACTCAAGAGAGAGCCCCAACCCCAAACACAGAGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR TCA 90 bp GGCAGCAGGAGCCTGGGCGTACCTGCTGTTCTGAGTGGGATCTGGGGGAAGTACTTAGGTCCTCTGTGTTaGAGTCATTCATCTGCCGAA +
Preference number: 4 (lower is better)
Translates to: GSRSLGVPAVLSGIWGKYLGPLC*SHSSAE
Trigger: TTCGGCAGATGAATGACTTCAACACAGAGGACCTAA...GTACTTCCCCCAGATCCCACTCAGAACAGCAGGTACGCCCAGGCTCCTGCTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR TCA 90 bp TGGAGAGAAGCTCAGCAACCTCGAATTGCACCCAGTAGAGAAGAAGGGAGCCCCCGACACTGGGCATGCTaGCGTTGTTCCTGTGGATGT +
Preference number: 4 (lower is better)
Translates to: WREAQQPRIAPSREEGSPRHWAC*RCSCGC
Trigger: ACATCCACAGGAACAACGTCAGCATGCCCAGTGTCG...GGGGCTCCCTTCTTCTCTACTGGGTGCAATTCGAGGTTGCTGAGCTTCTCTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp CCCCATAACCCAGCCAGGGAAATAAGCCCAACTTCAGGACCTCTCAGAAATCAGAGGCGCGAGAGCAGGTaGACGGCGCTGTTGAAGAAC +
Preference number: 4 (lower is better)
Translates to: PHNPAREISPTSGPLRNQRRESR*TALLKN
Trigger: GTTCTTCAACAGCGCCGTGCACCTGCTCTCGCGCCT...CTGATTTCTGAGAGGTCCTGAAGTTGGGCTTATTTCCCTGGCTGGGTTATGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp CATTTTAGACTTTGGAGAGAAGCTCAGCAACCTCGAATTGCACCCAGTAGAGAACACTGCAGCAGCCGCTaGCCCTCCCGGTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: HFRLWREAQQPRIAPSREHCSSR*PSRSSS
Trigger: GGAGCTGGACCGGGAGGGGCAGCGGCTGCTGCAGTG...TTCTCTACTGGGTGCAATTCGAGGTTGCTGAGCTTCTCTCCAAAGTCTAAAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp AAACTCTGTGTTTGGGGTTGGGGCTCTCTCTTGAGTGTGTTGGAAACTGGAGGATGCCCGGGATGCAGTTaGGTCCTGAGAAGCCGTCGC +
Preference number: 4 (lower is better)
Translates to: KLCVWGWGSLLSVLETGGCPGCS*VLRSRR
Trigger: GCGACGGCTTCTCAGGACGCAACTGCATCCCGGGCA...TCCTCCAGTTTCCAACACACTCAAGAGAGAGCCCCAACCCCAAACACAGAGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp GGCAGGCTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGCAGCACTGCCCGGGATaGAGTTGCGTCCTGAGAAGC +
Preference number: 4 (lower is better)
Translates to: GRLSFQNNSELPVNLRGAQHCPG*SCVLRS
Trigger: GCTTCTCAGGACGCAACTGCATCCCGGGCAGTGCTG...CGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAGCCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp GGCAGGCTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGGGGCTCAGGGGCCGCTaGAGCACATCAAGTAGTGCT +
Preference number: 4 (lower is better)
Translates to: GRLSFQNNSELPVNLRGAGLRGR*STSSSA
Trigger: AGCACTACTTGATGTGCTGCAGCGGCCCCTGAGCCC...CGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAGCCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp AAACTCTGTGTTTGGGGTTGGGGCTCTCTCTTGAGTGTGTTGGAAACTGGAGGATGCGGTGCTGCCAGATaGTCTCCAGCCGTCGCTGGT +
Preference number: 4 (lower is better)
Translates to: KLCVWGWGSLLSVLETGGCGAAR*SPAVAG
Trigger: ACCAGCGACGGCTGGAGAGCATCTGGCAGCACCGCA...TCCTCCAGTTTCCAACACACTCAAGAGAGAGCCCCAACCCCAAACACAGAGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp AAACTCTGTGTTTGGGGTTGGGGCTCTCTCTTGAGTGTGTTGGAAACTGGAGGAGGTGGAGCCGCACCTTaGGGTGCTGCCAGATGCTCT +
Preference number: 4 (lower is better)
Translates to: KLCVWGWGSLLSVLETGGGGAAP*GAARCS
Trigger: AGAGCATCTGGCAGCACCGCAAGGTGCGGCTCCACC...TCCTCCAGTTTCCAACACACTCAAGAGAGAGCCCCAACCCCAAACACAGAGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp CCCCATAACCCAGCCAGGGAAATAAGCCCAACTTCAGGACCTCTCAGAAATCAGAGGAGAAGCTTCCGCTaGTCCACCCTGCGCACGAAG +
Preference number: 4 (lower is better)
Translates to: PHNPAREISPTSGPLRNQRRSFR*STLRTK
Trigger: CTTCGTGCGCAGGGTGGAGCAGCGGAAGCTTCTCCT...CTGATTTCTGAGAGGTCCTGAAGTTGGGCTTATTTCCCTGGCTGGGTTATGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp TGGAGAGAAGCTCAGCAACCTCGAATTGCACCCAGTAGAGAAGAAGGGAGCCCCGTGGCGGTCTGCTGCTaGTGGAACTGCTTGATCAGT +
Preference number: 4 (lower is better)
Translates to: WREAQQPRIAPSREEGSPVAVCC*WNCLIS
Trigger: ACTGATCAAGCAGTTCCAGCAGCAGCAGACCGCCAC...GGGGCTCCCTTCTTCTCTACTGGGTGCAATTCGAGGTTGCTGAGCTTCTCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp TGGAGAGAAGCTCAGCAACCTCGAATTGCACCCAGTAGAGAAGAAGGGAGCCCCGCATCATCAAGCTGCTaGAGGACCGACTCGATGTGG +
Preference number: 4 (lower is better)
Translates to: WREAQQPRIAPSREEGSPASSSC*RTDSMW
Trigger: CCACATCGAGTCGGTCCTGCAGCAGCTTGATGATGC...GGGGCTCCCTTCTTCTCTACTGGGTGCAATTCGAGGTTGCTGAGCTTCTCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp GGCAGCAGGAGCCTGGGCGTACCTGCTGTTCTGAGTGGGATCTGGGGGAAGTACAATTCCAATAACTCTTaGACCTGGGCTGCCAGATCA +
Preference number: 4 (lower is better)
Translates to: GSRSLGVPAVLSGIWGKYNSNNS*TWAARS
Trigger: TGATCTGGCAGCCCAGGTGCAAGAGTTATTGGAATT...GTACTTCCCCCAGATCCCACTCAGAACAGCAGGTACGCCCAGGCTCCTGCTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp CCCCATAACCCAGCCAGGGAAATAAGCCCAACTTCAGGACCTCTCAGAAATCAGATGGCCAGTTGGAACTaGTCGTGCTCCCGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: PHNPAREISPTSGPLRNQMASWN*SCSRCS
Trigger: GCTGCAGCGGGAGCACGAGCAGTTCCAACTGGCCAT...CTGATTTCTGAGAGGTCCTGAAGTTGGGCTTATTTCCCTGGCTGGGTTATGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp TGGAGAGAAGCTCAGCAACCTCGAATTGCACCCAGTAGAGAAGAAGGGAGCCCCACCACAAGGCGAATTTaGAGGGATCGCCCTCCACGT +
Preference number: 4 (lower is better)
Translates to: WREAQQPRIAPSREEGSPTTRRI*RDRPPR
Trigger: ACGTGGAGGGCGATCCCTGCAAATTCGCCTTGTGGT...GGGGCTCCCTTCTTCTCTACTGGGTGCAATTCGAGGTTGCTGAGCTTCTCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp GGCAGGCTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTCGGGAGTGTGAGATaGACAGGGCGCTGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: GRLSFQNNSELPVNLRGAFGSVR*TGRCWG
Trigger: TCCCCAGCAGCGCCCTGTGCATCTCACACTCCCGAA...CGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAGCCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp TGGAGAGAAGCTCAGCAACCTCGAATTGCACCCAGTAGAGAAGAAGGGAGCCCCTACCAGAGATACCACTaGTCCCAGAAGCGGTCCGTC +
Preference number: 4 (lower is better)
Translates to: WREAQQPRIAPSREEGSPYQRYH*SQKRSV
Trigger: GACGGACCGCTTCTGGGACCAGTGGTATCTCTGGTA...GGGGCTCCCTTCTTCTCTACTGGGTGCAATTCGAGGTTGCTGAGCTTCTCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp TGGAGAGAAGCTCAGCAACCTCGAATTGCACCCAGTAGAGAAGAAGGGAGCCCCGCACACGTCCTCACTTaGCACGCTGGCCAAATACGT +
Preference number: 4 (lower is better)
Translates to: WREAQQPRIAPSREEGSPAHVLT*HAGQIR
Trigger: ACGTATTTGGCCAGCGTGCCAAGTGAGGACGTGTGC...GGGGCTCCCTTCTTCTCTACTGGGTGCAATTCGAGGTTGCTGAGCTTCTCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp GGGGGAAGTACATTGGGCCATTGGGCCTCTCACAGGTCCCTACTGCCCCACCATATCTCCGTGTGGCTCTaGAGGAATAACTCCTTGTTG +
Preference number: 4 (lower is better)
Translates to: GGSTLGHWASHRSLLPHHISVWL*RNNSLL
Trigger: CAACAAGGAGTTATTCCTCCAGAGCCACACGGAGAT...ATGGTGGGGCAGTAGGGACCTGTGAGAGGCCCAATGGCCCAATGTACTTCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp TGGAGAGAAGCTCAGCAACCTCGAATTGCACCCAGTAGAGAAGAAGGGAGCCCCTGCTCAGCCTTCTGGTaGAACACAGCAGACATGGCG +
Preference number: 4 (lower is better)
Translates to: WREAQQPRIAPSREEGSPCSAFW*NTADMA
Trigger: CGCCATGTCTGCTGTGTTCCACCAGAAGGCTGAGCA...GGGGCTCCCTTCTTCTCTACTGGGTGCAATTCGAGGTTGCTGAGCTTCTCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp TGGAGAGAAGCTCAGCAACCTCGAATTGCACCCAGTAGAGAAGAAGGGAGCCCCTGCTGTACATCCTGCTaGAAGACGCAGAGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: WREAQQPRIAPSREEGSPCCTSC*KTQSCS
Trigger: GCTGCAGCTCTGCGTCTTCCAGCAGGATGTACAGCA...GGGGCTCCCTTCTTCTCTACTGGGTGCAATTCGAGGTTGCTGAGCTTCTCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp GGAGTCCTGGTGGGAGGTCCCAACGGTGCCACGGCTAACCCGGTGAGCTGCAGGTCATGCTGCTTCTCATaGAGAAATTCCAATAACTCT +
Preference number: 4 (lower is better)
Translates to: GVLVGGPNGATANPVSCRSCCFS*RNSNNS
Trigger: AGAGTTATTGGAATTTCTCCATGAGAAGCAGCATGA...CCTGCAGCTCACCGGGTTAGCCGTGGCACCGTTGGGACCTCCCACCAGGACTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp GGCAGGCTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGACCGTCTGCCCCACCTaGATGGTCAGCTCACTGCTG +
Preference number: 4 (lower is better)
Translates to: GRLSFQNNSELPVNLRGATVCPT*MVSSLL
Trigger: CAGCAGTGAGCTGACCATCCAGGTGGGGCAGACGGT...CGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAGCCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
3UTR CAA 72 bp TGGCTCCTTCCCTCTGTGCAACTGACCAGCCATCTGTaGGAAAGTCGTGCGCAGTTGCCTGCCTTTCATGGA +
Preference number: 4 (lower is better)
Translates to: WLLPSVQLTSHL*ESRAQLPAFHG
Trigger: TCCATGAAAGGCAGGCAACTGCGCACGACTTTCCAACAGATGGCTGGTCAGTTGCACAGAGGGAAGGAGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483658.1
CDS-3UTR TCA 90 bp GGGGGAAGTACATTGGGCCATTGGGCCTCTCACAGGTCCCTACTGCCCCACCATGGGTGGAGATCTGCTTaGTTTGTTGTGAGGCATAAT +
Preference number: 4 (lower is better)
Translates to: GGSTLGHWASHRSLLPHHGWRSA*FVVRHN
Trigger: ATTATGCCTCACAACAAATCAAGCAGATCTCCACCC...ATGGTGGGGCAGTAGGGACCTGTGAGAGGCCCAATGGCCCAATGTACTTCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR TCA 90 bp TGGAGAGAAGCTCAGCAACCTCGAATTGCACCCAGTAGAGAAGAAGGGAGCCCCCTCCAGTGTGTTTGCTaGGAAAGGCCTCACCATGGT +
Preference number: 4 (lower is better)
Translates to: WREAQQPRIAPSREEGSPLQCVC*ERPHHG
Trigger: ACCATGGTGAGGCCTTTCTCAGCAAACACACTGGAG...GGGGCTCCCTTCTTCTCTACTGGGTGCAATTCGAGGTTGCTGAGCTTCTCTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR TCA 90 bp TGGAGAGAAGCTCAGCAACCTCGAATTGCACCCAGTAGAGAAGAAGGGAGCCCCTGCTCTAGCCGCTTATaGGTCTGCTCTGCATTGAGC +
Preference number: 4 (lower is better)
Translates to: WREAQQPRIAPSREEGSPCSSRL*VCSALS
Trigger: GCTCAATGCAGAGCAGACTCATAAGCGGCTAGAGCA...GGGGCTCCCTTCTTCTCTACTGGGTGCAATTCGAGGTTGCTGAGCTTCTCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR TCA 90 bp CCCCATAACCCAGCCAGGGAAATAAGCCCAACTTCAGGACCTCTCAGAAATCAGCTTCCATCTTCAGCATaGGCTGCTGCCAGTGGAGGG +
Preference number: 4 (lower is better)
Translates to: PHNPAREISPTSGPLRNQLPSSA*AAASGG
Trigger: CCCTCCACTGGCAGCAGCTCATGCTGAAGATGGAAG...CTGATTTCTGAGAGGTCCTGAAGTTGGGCTTATTTCCCTGGCTGGGTTATGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR TCA 90 bp ATTCAGGTCATCCACAGTGGACAGAACAGAACTTGCCAAGCTGGACTTTATGGACTGCTGTGGCTTTGGTaGGGGGCGCCAGGATGCTGC +
Preference number: 4 (lower is better)
Translates to: IQVIHSGQNRTCQAGLYGLLWLW*GAPGCC
Trigger: GCAGCATCCTGGCGCCCCTCACCAAAGCCACAGCAG...TCCATAAAGTCCAGCTTGGCAAGTTCTGTTCTGTCCACTGTGGATGACCTGAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR TCA 90 bp ATGTGCGATGGTCCCTATGGGGAAACCTGTCCACTTATGAATAAGGCCCTTTGTCTGGACCCTTCCAAGTaGTGGTGGGCTTTGGCCGCC +
Preference number: 4 (lower is better)
Translates to: MCDGPYGETCPLMNKALCLDPSK*WWALAA
Trigger: GGCGGCCAAAGCCCACCATCACTTGGAAGGGTCCAG...ACAAAGGGCCTTATTCATAAGTGGACAGGTTTCCCCATAGGGACCATCGCACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR TCA 90 bp GGCAGGCTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGGCAACCCTGCAGTTGTaGAGGTACTGCAGAGCCTCC +
Preference number: 4 (lower is better)
Translates to: GRLSFQNNSELPVNLRGAATLQL*RYCRAS
Trigger: GGAGGCTCTGCAGTACCTTCACAACTGCAGGGTTGC...CGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAGCCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp CCCCATAACCCAGCCAGGGAAATAAGCCCAACTTCAGGACCTCTCAGAAATCAGGGCTCGCACACAGCCTaGTCTAAGCAAATGCCTGCC +
Preference number: 4 (lower is better)
Translates to: PHNPAREISPTSGPLRNQGSHTA*SKQMPA
Trigger: GGCAGGCATTTGCTTAGAGCAGGCTGTGTGCGAGCC...CTGATTTCTGAGAGGTCCTGAAGTTGGGCTTATTTCCCTGGCTGGGTTATGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp CTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTCATCTGCAGCGGATGCACTaGAGCAGCCGCTGCCCCTCC +
Preference number: 4 (lower is better)
Translates to: LSFQNNSELPVNLRGAFHLQRMH*SSRCPS
Trigger: GGAGGGGCAGCGGCTGCTGCAGTGCATCCGCTGCAG...ATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp CTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTCATCGTCGCTGCAGCGGATaGACTGCAGCAGCCGCTGCC +
Preference number: 4 (lower is better)
Translates to: LSFQNNSELPVNLRGAFHRRCSG*TAAAAA
Trigger: GGCAGCGGCTGCTGCAGTGCATCCGCTGCAGCGACG...ATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp GGCAGGCTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGCTCCAGGTGTCGAGCTaGCTTGTAGATCTCCTCGGG +
Preference number: 4 (lower is better)
Translates to: GRLSFQNNSELPVNLRGALQVSS*LVDLLG
Trigger: CCCGAGGAGATCTACAAGGCAGCTCGACACCTGGAG...CGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAGCCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp CCCCATAACCCAGCCAGGGAAATAAGCCCAACTTCAGGACCTCTCAGAAATCAGGCACGAAGTCTTGGATaGGCACCTCCAGGTGTCGAG +
Preference number: 4 (lower is better)
Translates to: PHNPAREISPTSGPLRNQARSLG*APPGVE
Trigger: CTCGACACCTGGAGGTGCGCATCCAAGACTTCGTGC...CTGATTTCTGAGAGGTCCTGAAGTTGGGCTTATTTCCCTGGCTGGGTTATGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp AAACTCTGTGTTTGGGGTTGGGGCTCTCTCTTGAGTGTGTTGGAAACTGGAGGAATGGCCAGTTGGAACTaGTCGTGCTCCCGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: KLCVWGWGSLLSVLETGGMASWN*SCSRCS
Trigger: GCTGCAGCGGGAGCACGAGCAGTTCCAACTGGCCAT...TCCTCCAGTTTCCAACACACTCAAGAGAGAGCCCCAACCCCAAACACAGAGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp CCCCATAACCCAGCCAGGGAAATAAGCCCAACTTCAGGACCTCTCAGAAATCAGGCTTTCTGCTGTACCTaGAGGGCACTCTGGTGCGTC +
Preference number: 4 (lower is better)
Translates to: PHNPAREISPTSGPLRNQAFCCT*RALWCV
Trigger: GACGCACCAGAGTGCCCTGCAGGTACAGCAGAAAGC...CTGATTTCTGAGAGGTCCTGAAGTTGGGCTTATTTCCCTGGCTGGGTTATGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp GGCAGGCTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTCAGCATGAGCTGCTaGCAGTGGAGGGCCACCTTC +
Preference number: 4 (lower is better)
Translates to: GRLSFQNNSELPVNLRGAFSMSC*QWRATF
Trigger: GAAGGTGGCCCTCCACTGGCAGCAGCTCATGCTGAA...CGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAGCCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp GGCAGGCTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGATCTTCAGCATGAGCTaGTGCCAGTGGAGGGCCACC +
Preference number: 4 (lower is better)
Translates to: GRLSFQNNSELPVNLRGAIFSMS*CQWRAT
Trigger: GGTGGCCCTCCACTGGCAGCAGCTCATGCTGAAGAT...CGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAGCCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp TGGAGAGAAGCTCAGCAACCTCGAATTGCACCCAGTAGAGAAGAAGGGAGCCCCAAGAAGGTGCCCGCATaGTCCAGGATAAGCTGGTTG +
Preference number: 4 (lower is better)
Translates to: WREAQQPRIAPSREEGSPKKVPA*SRISWL
Trigger: CAACCAGCTTATCCTGGAGCATGCGGGCACCTTCTT...GGGGCTCCCTTCTTCTCTACTGGGTGCAATTCGAGGTTGCTGAGCTTCTCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp TGGAGAGAAGCTCAGCAACCTCGAATTGCACCCAGTAGAGAAGAAGGGAGCCCCGGACAAGTCCCAGGATaGGCGCTAAACGTAAGTGGA +
Preference number: 4 (lower is better)
Translates to: WREAQQPRIAPSREEGSPGQVPG*ALNVSG
Trigger: TCCACTTACGTTTAGCGCGCATCCTGGGACTTGTCC...GGGGCTCCCTTCTTCTCTACTGGGTGCAATTCGAGGTTGCTGAGCTTCTCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp AAGGAAGAAGGTCTACATTCCTCGAAACTCATCCAGCACAATTCATTGACCATACGCCGCCCTTCATGTTaGCCCGCCGCCCCAGCGCTC +
Preference number: 4 (lower is better)
Translates to: KEEGLHSSKLIQHNSLTIRRPSC*PAAPAL
Trigger: GAGCGCTGGGGCGGCGGGGCAACATGAAGGGCGGCG...TATGGTCAATGAATTGTGCTGGATGAGTTTCGAGGAATGTAGACCTTCTTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR CCA 90 bp CCCCATAACCCAGCCAGGGAAATAAGCCCAACTTCAGGACCTCTCAGAAATCAGCAGGGAAGGTCAGGATaGGTCCGCCTCGCTTATCAC +
Preference number: 4 (lower is better)
Translates to: PHNPAREISPTSGPLRNQQGRSG*VRLAYH
Trigger: GTGATAAGCGAGGCGGACCCATCCTGACCTTCCCTG...CTGATTTCTGAGAGGTCCTGAAGTTGGGCTTATTTCCCTGGCTGGGTTATGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp TGGAGAGAAGCTCAGCAACCTCGAATTGCACCCAGTAGAGAAGAAGGGAGCCCCCCTCACTTGGCACGCTaGCCAAATACGTCACGAGTT +
Preference number: 4 (lower is better)
Translates to: WREAQQPRIAPSREEGSPPHLAR*PNTSRV
Trigger: AACTCGTGACGTATTTGGCCAGCGTGCCAAGTGAGG...GGGGCTCCCTTCTTCTCTACTGGGTGCAATTCGAGGTTGCTGAGCTTCTCTCCA
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp CATTTTAGACTTTGGAGAGAAGCTCAGCAACCTCGAATTGCACCCAGTAGAGAACAGAGCTGCAGCCGCTaGTGGAGCCGCACCTTGCGG +
Preference number: 4 (lower is better)
Translates to: HFRLWREAQQPRIAPSREQSCSR*WSRTLR
Trigger: CCGCAAGGTGCGGCTCCACCAGCGGCTGCAGCTCTG...TTCTCTACTGGGTGCAATTCGAGGTTGCTGAGCTTCTCTCCAAAGTCTAAAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp CTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTCATCAGAGCTGCAGCCGCTaGTGGAGCCGCACCTTGCGG +
Preference number: 4 (lower is better)
Translates to: LSFQNNSELPVNLRGAFHQSCSR*WSRTLR
Trigger: CCGCAAGGTGCGGCTCCACCAGCGGCTGCAGCTCTG...ATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp CCCCATAACCCAGCCAGGGAAATAAGCCCAACTTCAGGACCTCTCAGAAATCAGCTGCGCACGAAGTCTTaGATGCGCACCTCCAGGTGT +
Preference number: 4 (lower is better)
Translates to: PHNPAREISPTSGPLRNQLRTKS*MRTSRC
Trigger: ACACCTGGAGGTGCGCATCCAAGACTTCGTGCGCAG...CTGATTTCTGAGAGGTCCTGAAGTTGGGCTTATTTCCCTGGCTGGGTTATGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp CTGACGAGGTTTAAGAGGTACATCTCTCAATTCAGAGAACTGCACGGAGTGAAAACACAGCCGAGTCCCTaGCCTCGCTGGGCTCCCCGA +
Preference number: 4 (lower is better)
Translates to: LTRFKRYISQFRELHGVKTQPSP*PRWAPR
Trigger: TCGGGGAGCCCAGCGAGGCCAGGGACTCGGCTGTGT...TTTCACTCCGTGCAGTTCTCTGAATTGAGAGATGTACCTCTTAAACCTCGTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp GGCAGGCTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGCAGCACATTCCCGGATaGCATCGGCATCGTAGTGGC +
Preference number: 4 (lower is better)
Translates to: GRLSFQNNSELPVNLRGAQHIPG*HRHRSG
Trigger: GCCACTACGATGCCGATGCCATCCGGGAATGTGCTG...CGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAGCCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp GGCAGGCTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGGTCGATCTCTGCTGCTaGCCCCAGCTTATCTCGTCC +
Preference number: 4 (lower is better)
Translates to: GRLSFQNNSELPVNLRGAVDLCC*PQLISS
Trigger: GGACGAGATAAGCTGGGGCCAGCAGCAGAGATCGAC...CGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAGCCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp TGGAGAGAAGCTCAGCAACCTCGAATTGCACCCAGTAGAGAAGAAGGGAGCCCCCCTGAGTCTCCTCTGTaGTCTCTCCAGTGGAGGTAT +
Preference number: 4 (lower is better)
Translates to: WREAQQPRIAPSREEGSPPESPL*SLQWRY
Trigger: ATACCTCCACTGGAGAGACCACAGAGGAGACTCAGG...GGGGCTCCCTTCTTCTCTACTGGGTGCAATTCGAGGTTGCTGAGCTTCTCTCCA
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp TGGAGAGAAGCTCAGCAACCTCGAATTGCACCCAGTAGAGAAGAAGGGAGCCCCTCTTCATTGACTTCGTaGTTGGCGTCCCGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: WREAQQPRIAPSREEGSPSSLTS*LASRSL
Trigger: CAAGCTGCGGGACGCCAACCACGAAGTCAATGAAGA...GGGGCTCCCTTCTTCTCTACTGGGTGCAATTCGAGGTTGCTGAGCTTCTCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp CCCCATAACCCAGCCAGGGAAATAAGCCCAACTTCAGGACCTCTCAGAAATCAGAGAGAGGTGGGTGATTaGAGTCCTGGTGGGAGGTCC +
Preference number: 4 (lower is better)
Translates to: PHNPAREISPTSGPLRNQREVGD*SPGGRS
Trigger: GGACCTCCCACCAGGACTCCAATCACCCACCTCTCT...CTGATTTCTGAGAGGTCCTGAAGTTGGGCTTATTTCCCTGGCTGGGTTATGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp GGCAGGCTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGCAGGGGAGGCAGAGGTaGGTTATAGCTGGAGCCCTT +
Preference number: 4 (lower is better)
Translates to: GRLSFQNNSELPVNLRGAQGRQR*VIAGAL
Trigger: AAGGGCTCCAGCTATAACCCACCTCTGCCTCCCCTG...CGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAGCCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp CTGACGAGGTTTAAGAGGTACATCTCTCAATTCAGAGAACTGCACGGAGTGAAATCGGCGGCGGGGGAATaGTCGCTGGCAGGCTGGTAC +
Preference number: 4 (lower is better)
Translates to: LTRFKRYISQFRELHGVKSAAGE*SLAGWY
Trigger: GTACCAGCCTGCCAGCGACCATTCCCCCGCCGCCGA...TTTCACTCCGTGCAGTTCTCTGAATTGAGAGATGTACCTCTTAAACCTCGTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp ATGTGCGATGGTCCCTATGGGGAAACCTGTCCACTTATGAATAAGGCCCTTTGTGATGCTGCAAGCATGTaGCTGCTGTGGGCCGCCTCC +
Preference number: 4 (lower is better)
Translates to: MCDGPYGETCPLMNKALCDAASM*LLWAAS
Trigger: GGAGGCGGCCCACAGCAGCCACATGCTTGCAGCATC...ACAAAGGGCCTTATTCATAAGTGGACAGGTTTCCCCATAGGGACCATCGCACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR TCA 90 bp TACAAAGACAGTCCTTTCCTGAGCCAGGTGCAATTCCAGAGAATGACACTTTGCGAGGCCGGAATCACTTaGCGCTGGGCTCGCACACAG +
Preference number: 4 (lower is better)
Translates to: YKDSPFLSQVQFQRMTLCEAGIT*RWARTQ
Trigger: CTGTGTGCGAGCCCAGCGTCAAGTGATTCCGGCCTC...GCAAAGTGTCATTCTCTGGAATTGCACCTGGCTCAGGAAAGGACTGTCTTTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR TCA 90 bp CCCCATAACCCAGCCAGGGAAATAAGCCCAACTTCAGGACCTCTCAGAAATCAGACTTCAGCCTGGAGGTaGCGTAATTGGAGGCACTGC +
Preference number: 4 (lower is better)
Translates to: PHNPAREISPTSGPLRNQTSAWR*RNWRHC
Trigger: GCAGTGCCTCCAATTACGTCACCTCCAGGCTGAAGT...CTGATTTCTGAGAGGTCCTGAAGTTGGGCTTATTTCCCTGGCTGGGTTATGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR TCA 90 bp CCCCATAACCCAGCCAGGGAAATAAGCCCAACTTCAGGACCTCTCAGAAATCAGGCTGGCGTTGAGCATTaGCTCTCCATTGCGGATCCA +
Preference number: 4 (lower is better)
Translates to: PHNPAREISPTSGPLRNQAGVEH*LSIADP
Trigger: TGGATCCGCAATGGAGAGTCAATGCTCAACGCCAGC...CTGATTTCTGAGAGGTCCTGAAGTTGGGCTTATTTCCCTGGCTGGGTTATGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR TCA 90 bp TGGAGAGAAGCTCAGCAACCTCGAATTGCACCCAGTAGAGAAGAAGGGAGCCCCAGGCCACAGAGGCATTaGCCAATTTTAGCCGGTCTT +
Preference number: 4 (lower is better)
Translates to: WREAQQPRIAPSREEGSPRPQRH*PILAGL
Trigger: AAGACCGGCTAAAATTGGTCAATGCCTCTGTGGCCT...GGGGCTCCCTTCTTCTCTACTGGGTGCAATTCGAGGTTGCTGAGCTTCTCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR TCA 90 bp TGGAGAGAAGCTCAGCAACCTCGAATTGCACCCAGTAGAGAAGAAGGGAGCCCCTCTTTCAGCAGTTCCTaGGTCTCCTCTGTGGTCTCT +
Preference number: 4 (lower is better)
Translates to: WREAQQPRIAPSREEGSPSFSSS*VSSVVS
Trigger: AGAGACCACAGAGGAGACTCAGGAACTGCTGAAAGA...GGGGCTCCCTTCTTCTCTACTGGGTGCAATTCGAGGTTGCTGAGCTTCTCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR TCA 90 bp GGGGGAAGTACATTGGGCCATTGGGCCTCTCACAGGTCCCTACTGCCCCACCATTGCAATTCCAGAGAATaGCACTTTGCATTGAGAGCA +
Preference number: 4 (lower is better)
Translates to: GGSTLGHWASHRSLLPHHCNSRE*HFALRA
Trigger: TGCTCTCAATGCAAAGTGTCATTCTCTGGAATTGCA...ATGGTGGGGCAGTAGGGACCTGTGAGAGGCCCAATGGCCCAATGTACTTCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR TCA 90 bp CTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTCATCTGCTGTGGCTTTGGTaGGGGGCGCCAGGATGCTGC +
Preference number: 4 (lower is better)
Translates to: LSFQNNSELPVNLRGAFHLLWLW*GAPGCC
Trigger: GCAGCATCCTGGCGCCCCTCACCAAAGCCACAGCAG...ATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp CCCCATAACCCAGCCAGGGAAATAAGCCCAACTTCAGGACCTCTCAGAAATCAGACTCCCGACAGGAACTaGTCAGCCTTCTGGTGGAAC +
Preference number: 4 (lower is better)
Translates to: PHNPAREISPTSGPLRNQTPDRN*SAFWWN
Trigger: GTTCCACCAGAAGGCTGAGCAGTTCCTGTCGGGAGT...CTGATTTCTGAGAGGTCCTGAAGTTGGGCTTATTTCCCTGGCTGGGTTATGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp GGCAGGCTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGACTCCCGACAGGAACTaGTCAGCCTTCTGGTGGAAC +
Preference number: 4 (lower is better)
Translates to: GRLSFQNNSELPVNLRGATPDRN*SAFWWN
Trigger: GTTCCACCAGAAGGCTGAGCAGTTCCTGTCGGGAGT...CGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAGCCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp CCCCATAACCCAGCCAGGGAAATAAGCCCAACTTCAGGACCTCTCAGAAATCAGCTTCACTGCACATCTTaGACCAGGCATCCACTCCCG +
Preference number: 4 (lower is better)
Translates to: PHNPAREISPTSGPLRNQLHCTS*TRHPLP
Trigger: CGGGAGTGGATGCCTGGTGCAAGATGTGCAGTGAAG...CTGATTTCTGAGAGGTCCTGAAGTTGGGCTTATTTCCCTGGCTGGGTTATGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp GGCAGGCTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGACCTGCTGTACATCCTaGTGGAAGACGCAGAGCTGC +
Preference number: 4 (lower is better)
Translates to: GRLSFQNNSELPVNLRGATCCTS*WKTQSC
Trigger: GCAGCTCTGCGTCTTCCAGCAGGATGTACAGCAGGT...CGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAGCCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp TGGAGAGAAGCTCAGCAACCTCGAATTGCACCCAGTAGAGAAGAAGGGAGCCCCATCCAGTCCAACACCTaGTGTACATCCTGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: WREAQQPRIAPSREEGSPIQSNT*CTSCWK
Trigger: CTTCCAGCAGGATGTACAGCAGGTGTTGGACTGGAT...GGGGCTCCCTTCTTCTCTACTGGGTGCAATTCGAGGTTGCTGAGCTTCTCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp CCCCATAACCCAGCCAGGGAAATAAGCCCAACTTCAGGACCTCTCAGAAATCAGAGAGTGGCGGTCTGCTaGTGCTGGAACTGCTTGATC +
Preference number: 4 (lower is better)
Translates to: PHNPAREISPTSGPLRNQRVAVC*CWNCLI
Trigger: GATCAAGCAGTTCCAGCAGCAGCAGACCGCCACTCT...CTGATTTCTGAGAGGTCCTGAAGTTGGGCTTATTTCCCTGGCTGGGTTATGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp GGCAGGCTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGAGAGTGGCGGTCTGCTaGTGCTGGAACTGCTTGATC +
Preference number: 4 (lower is better)
Translates to: GRLSFQNNSELPVNLRGARVAVC*CWNCLI
Trigger: GATCAAGCAGTTCCAGCAGCAGCAGACCGCCACTCT...CGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAGCCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp GGCAGGCTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGGCATCATCAAGCTGCTaGAGGACCGACTCGATGTGG +
Preference number: 4 (lower is better)
Translates to: GRLSFQNNSELPVNLRGAASSSC*RTDSMW
Trigger: CCACATCGAGTCGGTCCTGCAGCAGCTTGATGATGC...CGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAGCCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp GGCAGCAGGAGCCTGGGCGTACCTGCTGTTCTGAGTGGGATCTGGGGGAAGTACTTGAAGTCATTCATCTaGCGAAGCAAGTCTTCATTC +
Preference number: 4 (lower is better)
Translates to: GSRSLGVPAVLSGIWGKYLKSFI*RSKSSF
Trigger: GAATGAAGACTTGCTTCGGCAGATGAATGACTTCAA...GTACTTCCCCCAGATCCCACTCAGAACAGCAGGTACGCCCAGGCTCCTGCTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp GGCAGGCTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTCCGTGATGTACTGGTaGAGATCCTGTCCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: GRLSFQNNSELPVNLRGASVMYW*RSCPCW
Trigger: CCAGCAGGGACAGGATCTGCACCAGTACATCACGGA...CGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAGCCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp GGGGGAAGTACATTGGGCCATTGGGCCTCTCACAGGTCCCTACTGCCCCACCATAGCTCCAATTCATGCTaGTTCTCATGGAGAAATTCC +
Preference number: 4 (lower is better)
Translates to: GGSTLGHWASHRSLLPHHSSNSC*FSWRNS
Trigger: GGAATTTCTCCATGAGAAGCAGCATGAATTGGAGCT...ATGGTGGGGCAGTAGGGACCTGTGAGAGGCCCAATGGCCCAATGTACTTCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp GGCAGCAGGAGCCTGGGCGTACCTGCTGTTCTGAGTGGGATCTGGGGGAAGTACTTGAGCTCCAATTCATaGTGCTTCTCATGGAGAAAT +
Preference number: 4 (lower is better)
Translates to: GSRSLGVPAVLSGIWGKYLSSNS*CFSWRN
Trigger: ATTTCTCCATGAGAAGCAGCATGAATTGGAGCTCAA...GTACTTCCCCCAGATCCCACTCAGAACAGCAGGTACGCCCAGGCTCCTGCTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp GGGGGAAGTACATTGGGCCATTGGGCCTCTCACAGGTCCCTACTGCCCCACCATCTTATGAGTCTGCTCTaGATTGAGCTCCAATTCATG +
Preference number: 4 (lower is better)
Translates to: GGSTLGHWASHRSLLPHHLMSLL*IELQFM
Trigger: CATGAATTGGAGCTCAATGCAGAGCAGACTCATAAG...ATGGTGGGGCAGTAGGGACCTGTGAGAGGCCCAATGGCCCAATGTACTTCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp AAACTCTGTGTTTGGGGTTGGGGCTCTCTCTTGAGTGTGTTGGAAACTGGAGGAATCTTCAGCATGAGCTaGTGCCAGTGGAGGGCCACC +
Preference number: 4 (lower is better)
Translates to: KLCVWGWGSLLSVLETGGIFSMS*CQWRAT
Trigger: GGTGGCCCTCCACTGGCAGCAGCTCATGCTGAAGAT...TCCTCCAGTTTCCAACACACTCAAGAGAGAGCCCCAACCCCAAACACAGAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp CCCCATAACCCAGCCAGGGAAATAAGCCCAACTTCAGGACCTCTCAGAAATCAGATGGCTTTCACTTGTTaGTCGGGTCCCCGAGTGTGG +
Preference number: 4 (lower is better)
Translates to: PHNPAREISPTSGPLRNQMAFTC*SGPRVW
Trigger: CCACACTCGGGGACCCGAGCAACAAGTGAAAGCCAT...CTGATTTCTGAGAGGTCCTGAAGTTGGGCTTATTTCCCTGGCTGGGTTATGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp GGCAGGCTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGACCACAAGGCGAATTTaGAGGGATCGCCCTCCACGT +
Preference number: 4 (lower is better)
Translates to: GRLSFQNNSELPVNLRGATTRRI*RDRPPR
Trigger: ACGTGGAGGGCGATCCCTGCAAATTCGCCTTGTGGT...CGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAGCCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp TGGAGAGAAGCTCAGCAACCTCGAATTGCACCCAGTAGAGAAGAAGGGAGCCCCACCGAGGAACAAGGTTaGCATCCTTGTCACTGTCCA +
Preference number: 4 (lower is better)
Translates to: WREAQQPRIAPSREEGSPTEEQG*HPCHCP
Trigger: TGGACAGTGACAAGGATGGCAACCTTGTTCCTCGGT...GGGGCTCCCTTCTTCTCTACTGGGTGCAATTCGAGGTTGCTGAGCTTCTCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp AAACTCTGTGTTTGGGGTTGGGGCTCTCTCTTGAGTGTGTTGGAAACTGGAGGATCTCCAGGTCCCAGGTaGCACCGAGGAACAAGGTTG +
Preference number: 4 (lower is better)
Translates to: KLCVWGWGSLLSVLETGGSPGPR*HRGTRL
Trigger: CAACCTTGTTCCTCGGTGGCACCTGGGACCTGGAGA...TCCTCCAGTTTCCAACACACTCAAGAGAGAGCCCCAACCCCAAACACAGAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp GGCAGGCTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGACTTCAGTGGAAGCCTaGCGGGCTGCTAGCAAAGAG +
Preference number: 4 (lower is better)
Translates to: GRLSFQNNSELPVNLRGATSVEA*RAASKE
Trigger: CTCTTTGCTAGCAGCCCGGCAGGCTTCCACTGAAGT...CGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAGCCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp GGCAGGCTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGCCGGGACTGCATGCCTaGATCCAGCTCGATCACATA +
Preference number: 4 (lower is better)
Translates to: GRLSFQNNSELPVNLRGAPGLHA*IQLDHI
Trigger: TATGTGATCGAGCTGGATGCAGGCATGCAGTCCCGG...CGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAGCCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp GGCAGGCTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTGCAGCCATGGATGCTaGAAGCATGTGGCTGCTGTG +
Preference number: 4 (lower is better)
Translates to: GRLSFQNNSELPVNLRGACSHGC*KHVAAV
Trigger: CACAGCAGCCACATGCTTGCAGCATCCATGGCTGCA...CGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAGCCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp GGCAGGCTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGCTGCCATTATGGGGCTaGAGCCATGGATGCTGCAAG +
Preference number: 4 (lower is better)
Translates to: GRLSFQNNSELPVNLRGALPLWG*SHGCCK
Trigger: CTTGCAGCATCCATGGCTGCAGCCCCATAATGGCAG...CGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAGCCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp GGCAGGCTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGGCTAGAGTGCAGTGGTaGAATCTCGGCTCACGGCAA +
Preference number: 4 (lower is better)
Translates to: GRLSFQNNSELPVNLRGAARVQW*NLGSRQ
Trigger: TTGCCGTGAGCCGAGATTGCACCACTGCACTCTAGC...CGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAGCCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR CCA 90 bp GGCAGGCTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTACCAGAGATACCACTaGTCCCAGAAGCGGTCCGTC +
Preference number: 4 (lower is better)
Translates to: GRLSFQNNSELPVNLRGAYQRYH*SQKRSV
Trigger: GACGGACCGCTTCTGGGACCAGTGGTATCTCTGGTA...CGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAGCCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360013.7
CDS-3UTR CCA 90 bp CATTTTAGACTTTGGAGAGAAGCTCAGCAACCTCGAATTGCACCCAGTAGAGAACGGGCTAGCATCTCCTaGAGGTCCTCGAGGCGCGAG +
Preference number: 4 (lower is better)
Translates to: HFRLWREAQQPRIAPSRERASIS*RSSRRE
Trigger: CTCGCGCCTCGAGGACCTCCAGGAGATGCTAGCCCG...TTCTCTACTGGGTGCAATTCGAGGTTGCTGAGCTTCTCTCCAAAGTCTAAAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp TGGAGAGAAGCTCAGCAACCTCGAATTGCACCCAGTAGAGAAGAAGGGAGCCCCGGAGCTTGTCCGCATTaGTGTACGTATTCTGAGCCA +
Preference number: 4 (lower is better)
Translates to: WREAQQPRIAPSREEGSPGACPH*CTYSEP
Trigger: TGGCTCAGAATACGTACACCAATGCGGACAAGCTCC...GGGGCTCCCTTCTTCTCTACTGGGTGCAATTCGAGGTTGCTGAGCTTCTCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp CCCCATAACCCAGCCAGGGAAATAAGCCCAACTTCAGGACCTCTCAGAAATCAGGCGGTCTGCTGCTGCTaGAACTGCTTGATCAGTTCC +
Preference number: 4 (lower is better)
Translates to: PHNPAREISPTSGPLRNQAVCCC*NCLISS
Trigger: GGAACTGATCAAGCAGTTCCAGCAGCAGCAGACCGC...CTGATTTCTGAGAGGTCCTGAAGTTGGGCTTATTTCCCTGGCTGGGTTATGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp GGCAGGCTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGGGGGTGTTTTGTTGTTaGACACAGCCGAGTCCCTGG +
Preference number: 4 (lower is better)
Translates to: GRLSFQNNSELPVNLRGAGVFCC*TQPSPW
Trigger: CCAGGGACTCGGCTGTGTCCAACAACAAAACACCCC...CGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAGCCTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp TGGAGAGAAGCTCAGCAACCTCGAATTGCACCCAGTAGAGAAGAAGGGAGCCCCCTGCTGTCACCTCGATaGTGTACTGCTCAAAGATGC +
Preference number: 4 (lower is better)
Translates to: WREAQQPRIAPSREEGSPLLSPR*CTAQRC
Trigger: GCATCTTTGAGCAGTACACCATCGAGGTGACAGCAG...GGGGCTCCCTTCTTCTCTACTGGGTGCAATTCGAGGTTGCTGAGCTTCTCTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp CTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTCATTCGGGTCCCCGAGTGTaGCTGGCGACACTGGGCATG +
Preference number: 4 (lower is better)
Translates to: LSFQNNSELPVNLRGAFHSGPRV*LATLGM
Trigger: CATGCCCAGTGTCGCCAGCCACACTCGGGGACCCGA...ATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp TGGAGAGAAGCTCAGCAACCTCGAATTGCACCCAGTAGAGAAGAAGGGAGCCCCAACACCACATATTGCTaGCATTGGTCTAACCGCCGC +
Preference number: 4 (lower is better)
Translates to: WREAQQPRIAPSREEGSPNTTYC*HWSNRR
Trigger: GCGGCGGTTAGACCAATGCCAGCAATATGTGGTGTT...GGGGCTCCCTTCTTCTCTACTGGGTGCAATTCGAGGTTGCTGAGCTTCTCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp TGGAGAGAAGCTCAGCAACCTCGAATTGCACCCAGTAGAGAAGAAGGGAGCCCCCCTCTTGCCTTGGTGTaGGGTTTCCATGAAACTCTG +
Preference number: 4 (lower is better)
Translates to: WREAQQPRIAPSREEGSPPLALV*GFHETL
Trigger: CAGAGTTTCATGGAAACCCCACACCAAGGCAAGAGG...GGGGCTCCCTTCTTCTCTACTGGGTGCAATTCGAGGTTGCTGAGCTTCTCTCCA
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp CTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTCATGCTGGGCCTGCAGGTTaGCCACGGACTCGGACTTGC +
Preference number: 4 (lower is better)
Translates to: LSFQNNSELPVNLRGAFHAGPAG*PRTRTC
Trigger: GCAAGTCCGAGTCCGTGGCCAACCTGCAGGCCCAGC...ATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp CTGACGAGGTTTAAGAGGTACATCTCTCAATTCAGAGAACTGCACGGAGTGAAAGCTGGGCCTGCAGGTTaGCCACGGACTCGGACTTGC +
Preference number: 4 (lower is better)
Translates to: LTRFKRYISQFRELHGVKAGPAG*PRTRTC
Trigger: GCAAGTCCGAGTCCGTGGCCAACCTGCAGGCCCAGC...TTTCACTCCGTGCAGTTCTCTGAATTGAGAGATGTACCTCTTAAACCTCGTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp GGCAGGCTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTAGGAGGTGTGGGTaGGGCCATCCCCTCATTCAG +
Preference number: 4 (lower is better)
Translates to: GRLSFQNNSELPVNLRGAFRRCG*GHPLIQ
Trigger: CTGAATGAGGGGATGGCCCCACCCACACCTCCTAAA...CGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAGCCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp GTAAAAGCTGATATGAAAGCTTGGGGTCTGTCTAACATTCTGTCAACTGCCCCCCGGGGGAATGGTCGCTaGCAGGCTGGTACACCAGAC +
Preference number: 4 (lower is better)
Translates to: VKADMKAWGLSNILSTAPRGNGR*QAGTPD
Trigger: GTCTGGTGTACCAGCCTGCCAGCGACCATTCCCCCG...GGGGGCAGTTGACAGAATGTTAGACAGACCCCAAGCTTTCATATCAGCTTTTAC
53% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR CCA 90 bp GGCAGGCTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGAGTGATGGTGGGCTTTaGCCGCCCACAGACTTTGCA +
Preference number: 4 (lower is better)
Translates to: GRLSFQNNSELPVNLRGASDGGL*PPTDFA
Trigger: TGCAAAGTCTGTGGGCGGCCAAAGCCCACCATCACT...CGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAGCCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp GGCAGGCTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGATAGGGGCTGGGAGATaGCTACGTCCCTTGGTTCAC +
Preference number: 4 (lower is better)
Translates to: GRLSFQNNSELPVNLRGAIGAGR*LRPLVH
Trigger: GTGAACCAAGGGACGTAGCCATCTCCCAGCCCCTAT...CGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAGCCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp GGCAGGCTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTGCACACCATTGTTCTaGGCCCTGGCCTTCTCAAGC +
Preference number: 4 (lower is better)
Translates to: GRLSFQNNSELPVNLRGACTPLF*ALAFSS
Trigger: GCTTGAGAAGGCCAGGGCCCAGAACAATGGTGTGCA...CGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAGCCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291478.9
3UTR CAA 72 bp TCGTGCGCAGTTGCCTGCCTTTCATGGATGCTTCCATaGCCTGTTCAACATACTCACTCTCCAGGCTTGCCA +
Preference number: 4 (lower is better)
Translates to: SCAVACLSWMLP*PVQHTHSPGLP
Trigger: TGGCAAGCCTGGAGAGTGAGTATGTTGAACAGGCAATGGAAGCATCCATGAAAGGCAGGCAACTGCGCACGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483658.1
3UTR CAA 72 bp CAACTGACCAGCCATCTGTTGGAAAGTCGTGCGCAGTaGCCTGCCTTTCATGGATGCTTCCATTGCCTGTTC +
Preference number: 4 (lower is better)
Translates to: QLTSHLLESRAQ*PAFHGCFHCLF
Trigger: GAACAGGCAATGGAAGCATCCATGAAAGGCAGGCAACTGCGCACGACTTTCCAACAGATGGCTGGTCAGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483658.1
CDS-3UTR TCA 90 bp CTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTCATGATGCAGTTGCGTCCTaGGAAGCCGTCGCTGCAGCG +
Preference number: 4 (lower is better)
Translates to: LSFQNNSELPVNLRGAFHDAVAS*EAVAAA
Trigger: CGCTGCAGCGACGGCTTCTCAGGACGCAACTGCATC...ATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp GCCAGTGTTTGGGAAAGGCTAAAGTTAACCCTCATCTTCTCTACCACACATCATGATGCAGTTGCGTCCTaGGAAGCCGTCGCTGCAGCG +
Preference number: 4 (lower is better)
Translates to: ASVWERLKLTLIFSTTHHDAVAS*EAVAAA
Trigger: CGCTGCAGCGACGGCTTCTCAGGACGCAACTGCATC...ATGATGTGTGGTAGAGAAGATGAGGGTTAACTTTAGCCTTTCCCAAACACTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR TCA 90 bp CTGACGAGGTTTAAGAGGTACATCTCTCAATTCAGAGAACTGCACGGAGTGAAAGGGCGTACTGGTAGCTaGCTCCGATCTCCGTGTGGC +
Preference number: 4 (lower is better)
Translates to: LTRFKRYISQFRELHGVKGRTGS*LRSPCG
Trigger: GCCACACGGAGATCGGAGTCAGCTACCAGTACGCCC...TTTCACTCCGTGCAGTTCTCTGAATTGAGAGATGTACCTCTTAAACCTCGTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp TACAAAGACAGTCCTTTCCTGAGCCAGGTGCAATTCCAGAGAATGACACTTTGCAGTTGGCTGTGGCCGTaGGGGATTCGGAGTTCCCAG +
Preference number: 4 (lower is better)
Translates to: YKDSPFLSQVQFQRMTLCSWLWP*GIRSSQ
Trigger: CTGGGAACTCCGAATCCCTCACGGCCACAGCCAACT...GCAAAGTGTCATTCTCTGGAATTGCACCTGGCTCAGGAAAGGACTGTCTTTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR TCA 90 bp AAACTCTGTGTTTGGGGTTGGGGCTCTCTCTTGAGTGTGTTGGAAACTGGAGGAATGCCTGGACCTCCGTaGTGTACTGGTGCAGATCCT +
Preference number: 4 (lower is better)
Translates to: KLCVWGWGSLLSVLETGGMPGPP*CTGADP
Trigger: AGGATCTGCACCAGTACATCACGGAGGTCCAGGCAT...TCCTCCAGTTTCCAACACACTCAAGAGAGAGCCCCAACCCCAAACACAGAGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR TCA 90 bp GGCAGGCTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGATCCCAGAACCTGTTTaGCTTCAGCCTGGAGGTGAC +
Preference number: 4 (lower is better)
Translates to: GRLSFQNNSELPVNLRGAIPEPV*LQPGGD
Trigger: GTCACCTCCAGGCTGAAGTCAAACAGGTTCTGGGAT...CGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAGCCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp TGGAGAGAAGCTCAGCAACCTCGAATTGCACCCAGTAGAGAAGAAGGGAGCCCCTCCTGTGGATGTACTTaGGAAACACCTCAGCATTCC +
Preference number: 4 (lower is better)
Translates to: WREAQQPRIAPSREEGSPSCGCT*ETPQHS
Trigger: GGAATGCTGAGGTGTTTCTCAAGTACATCCACAGGA...GGGGCTCCCTTCTTCTCTACTGGGTGCAATTCGAGGTTGCTGAGCTTCTCTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR TCA 90 bp AAACTCTGTGTTTGGGGTTGGGGCTCTCTCTTGAGTGTGTTGGAAACTGGAGGATCCGCTTCTCTTCATTaGCTTCGTGGTTGGCGTCCC +
Preference number: 4 (lower is better)
Translates to: KLCVWGWGSLLSVLETGGSASLH*LRGWRP
Trigger: GGGACGCCAACCACGAAGTCAATGAAGAGAAGCGGA...TCCTCCAGTTTCCAACACACTCAAGAGAGAGCCCCAACCCCAAACACAGAGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR TCA 90 bp GGCAGGCTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGCACTGTTTTATTGTCTaGGGATGGGGTGCGCCCAGA +
Preference number: 4 (lower is better)
Translates to: GRLSFQNNSELPVNLRGAHCFIV*GWGAPR
Trigger: TCTGGGCGCACCCCATCCTCAGACAATAAAACAGTG...CGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAGCCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp CCCCATAACCCAGCCAGGGAAATAAGCCCAACTTCAGGACCTCTCAGAAATCAGCACTGTTTTATTGTCTaGGGATGGGGTGCGCCCAGA +
Preference number: 4 (lower is better)
Translates to: PHNPAREISPTSGPLRNQHCFIV*GWGAPR
Trigger: TCTGGGCGCACCCCATCCTCAGACAATAAAACAGTG...CTGATTTCTGAGAGGTCCTGAAGTTGGGCTTATTTCCCTGGCTGGGTTATGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR TCA 90 bp CTGACGAGGTTTAAGAGGTACATCTCTCAATTCAGAGAACTGCACGGAGTGAAACTGGACCCTTCCAAGTaGTGGTGGGCTTTGGCCGCC +
Preference number: 4 (lower is better)
Translates to: LTRFKRYISQFRELHGVKLDPSK*WWALAA
Trigger: GGCGGCCAAAGCCCACCATCACTTGGAAGGGTCCAG...TTTCACTCCGTGCAGTTCTCTGAATTGAGAGATGTACCTCTTAAACCTCGTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp GGCAGGCTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGAGACCCCACTCAGCATaGCATATGTCAGAACCCCGA +
Preference number: 4 (lower is better)
Translates to: GRLSFQNNSELPVNLRGARPHSA*HMSEPR
Trigger: TCGGGGTTCTGACATATGTCATGCTGAGTGGGGTCT...CGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAGCCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp GGCAGGCTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTCAGCGGCTGCATGGTaGCAGGTATTGCAATCTCAG +
Preference number: 4 (lower is better)
Translates to: GRLSFQNNSELPVNLRGASAAAW*QVLQSQ
Trigger: CTGAGATTGCAATACCTGTCACCATGCAGCCGCTGA...CGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAGCCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp GGCAGGCTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGCTACAGTTTGTCCCATaGCAAACCCTATGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: GRLSFQNNSELPVNLRGALQFVP*QTLWAR
Trigger: CCTGGCCCATAGGGTTTGTCATGGGACAAACTGTAG...CGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAGCCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR GCA 90 bp TATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAACACTGCAGCAGCCGCTaGCCCTCCCGGTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: YLQSHSVLLWFTLHVYVKHCSSR*PSRSSS
Trigger: GGAGCTGGACCGGGAGGGGCAGCGGCTGCTGCAGTG...TTTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp TACAAAGACAGTCCTTTCCTGAGCCAGGTGCAATTCCAGAGAATGACACTTTGCCAGCACTGCCCGGGATaGAGTTGCGTCCTGAGAAGC +
Preference number: 4 (lower is better)
Translates to: YKDSPFLSQVQFQRMTLCQHCPG*SCVLRS
Trigger: GCTTCTCAGGACGCAACTGCATCCCGGGCAGTGCTG...GCAAAGTGTCATTCTCTGGAATTGCACCTGGCTCAGGAAAGGACTGTCTTTGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp TGGAGAGAAGCTCAGCAACCTCGAATTGCACCCAGTAGAGAAGAAGGGAGCCCCAGCTGGGTGGAGATCTaGTTGATTTGTTGTGAGGCA +
Preference number: 4 (lower is better)
Translates to: WREAQQPRIAPSREEGSPSWVEI*LICCEA
Trigger: TGCCTCACAACAAATCAAGCAGATCTCCACCCAGCT...GGGGCTCCCTTCTTCTCTACTGGGTGCAATTCGAGGTTGCTGAGCTTCTCTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp TACAAAGACAGTCCTTTCCTGAGCCAGGTGCAATTCCAGAGAATGACACTTTGCGGGCTCAGGGGCCGCTaGAGCACATCAAGTAGTGCT +
Preference number: 4 (lower is better)
Translates to: YKDSPFLSQVQFQRMTLCGLRGR*STSSSA
Trigger: AGCACTACTTGATGTGCTGCAGCGGCCCCTGAGCCC...GCAAAGTGTCATTCTCTGGAATTGCACCTGGCTCAGGAAAGGACTGTCTTTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp CTGACGAGGTTTAAGAGGTACATCTCTCAATTCAGAGAACTGCACGGAGTGAAATGCGGTGCTGCCAGATaGTCTCCAGCCGTCGCTGGT +
Preference number: 4 (lower is better)
Translates to: LTRFKRYISQFRELHGVKCGAAR*SPAVAG
Trigger: ACCAGCGACGGCTGGAGAGCATCTGGCAGCACCGCA...TTTCACTCCGTGCAGTTCTCTGAATTGAGAGATGTACCTCTTAAACCTCGTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp CATTTTAGACTTTGGAGAGAAGCTCAGCAACCTCGAATTGCACCCAGTAGAGAATGCGGTGCTGCCAGATaGTCTCCAGCCGTCGCTGGT +
Preference number: 4 (lower is better)
Translates to: HFRLWREAQQPRIAPSRECGAAR*SPAVAG
Trigger: ACCAGCGACGGCTGGAGAGCATCTGGCAGCACCGCA...TTCTCTACTGGGTGCAATTCGAGGTTGCTGAGCTTCTCTCCAAAGTCTAAAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp CATTTTAGACTTTGGAGAGAAGCTCAGCAACCTCGAATTGCACCCAGTAGAGAAAGCCGCACCTTGCGGTaGTGCCAGATGCTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: HFRLWREAQQPRIAPSRESRTLR*CQMLSS
Trigger: GCTGGAGAGCATCTGGCAGCACCGCAAGGTGCGGCT...TTCTCTACTGGGTGCAATTCGAGGTTGCTGAGCTTCTCTCCAAAGTCTAAAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp CTGACGAGGTTTAAGAGGTACATCTCTCAATTCAGAGAACTGCACGGAGTGAAAGGTGGAGCCGCACCTTaGGGTGCTGCCAGATGCTCT +
Preference number: 4 (lower is better)
Translates to: LTRFKRYISQFRELHGVKGGAAP*GAARCS
Trigger: AGAGCATCTGGCAGCACCGCAAGGTGCGGCTCCACC...TTTCACTCCGTGCAGTTCTCTGAATTGAGAGATGTACCTCTTAAACCTCGTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp TACAAAGACAGTCCTTTCCTGAGCCAGGTGCAATTCCAGAGAATGACACTTTGCTCCGCTGCTCCACCCTaGGCACGAAGTCTTGGATGC +
Preference number: 4 (lower is better)
Translates to: YKDSPFLSQVQFQRMTLCSAAPP*ARSLGC
Trigger: GCATCCAAGACTTCGTGCGCAGGGTGGAGCAGCGGA...GCAAAGTGTCATTCTCTGGAATTGCACCTGGCTCAGGAAAGGACTGTCTTTGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp AAACTCTGTGTTTGGGGTTGGGGCTCTCTCTTGAGTGTGTTGGAAACTGGAGGAAGAGTGGCGGTCTGCTaGTGCTGGAACTGCTTGATC +
Preference number: 4 (lower is better)
Translates to: KLCVWGWGSLLSVLETGGRVAVC*CWNCLI
Trigger: GATCAAGCAGTTCCAGCAGCAGCAGACCGCCACTCT...TCCTCCAGTTTCCAACACACTCAAGAGAGAGCCCCAACCCCAAACACAGAGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp AAACTCTGTGTTTGGGGTTGGGGCTCTCTCTTGAGTGTGTTGGAAACTGGAGGATGGGCATCATCAAGCTaGTGCAGGACCGACTCGATG +
Preference number: 4 (lower is better)
Translates to: KLCVWGWGSLLSVLETGGWASSS*CRTDSM
Trigger: CATCGAGTCGGTCCTGCAGCAGCTTGATGATGCCCA...TCCTCCAGTTTCCAACACACTCAAGAGAGAGCCCCAACCCCAAACACAGAGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp CTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTCATCGTTCTGTGTGGCGCTaGAGCCGCTGTTCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: LSFQNNSELPVNLRGAFHRSVWR*SRCSAR
Trigger: CCTGGCAGAACAGCGGCTGCAGCGCCACACAGAACG...ATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp CATTTTAGACTTTGGAGAGAAGCTCAGCAACCTCGAATTGCACCCAGTAGAGAACGTTCTGTGTGGCGCTaGAGCCGCTGTTCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: HFRLWREAQQPRIAPSRERSVWR*SRCSAR
Trigger: CCTGGCAGAACAGCGGCTGCAGCGCCACACAGAACG...TTCTCTACTGGGTGCAATTCGAGGTTGCTGAGCTTCTCTCCAAAGTCTAAAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp AAACTCTGTGTTTGGGGTTGGGGCTCTCTCTTGAGTGTGTTGGAAACTGGAGGATGCAGGGCACTCTGGTaGGTCTTCTGCAAGGAAGTG +
Preference number: 4 (lower is better)
Translates to: KLCVWGWGSLLSVLETGGCRALW*VFCKEV
Trigger: CACTTCCTTGCAGAAGACGCACCAGAGTGCCCTGCA...TCCTCCAGTTTCCAACACACTCAAGAGAGAGCCCCAACCCCAAACACAGAGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000240874.7
CDS-3UTR GCA 90 bp GGCAGGCTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGAAGAAGGTGCCCGCATaGTCCAGGATAAGCTGGTTG +
Preference number: 4 (lower is better)
Translates to: GRLSFQNNSELPVNLRGAKKVPA*SRISWL
Trigger: CAACCAGCTTATCCTGGAGCATGCGGGCACCTTCTT...CGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAGCCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp CCCCATAACCCAGCCAGGGAAATAAGCCCAACTTCAGGACCTCTCAGAAATCAGAGAATCAACTCCCCCTaGACATCCAGGTTCTCGTCG +
Preference number: 4 (lower is better)
Translates to: PHNPAREISPTSGPLRNQRINSP*TSRFSS
Trigger: CGACGAGAACCTGGATGTGCAGGGGGAGTTGATTCT...CTGATTTCTGAGAGGTCCTGAAGTTGGGCTTATTTCCCTGGCTGGGTTATGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp CATTTTAGACTTTGGAGAGAAGCTCAGCAACCTCGAATTGCACCCAGTAGAGAAGGATCGCCCTCCACGTaGTCGGTCACACCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: HFRLWREAQQPRIAPSREGSPST*SVTPSS
Trigger: AGAGCTGGGTGTGACCGAGCACGTGGAGGGCGATCC...TTCTCTACTGGGTGCAATTCGAGGTTGCTGAGCTTCTCTCCAAAGTCTAAAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp CTGACGAGGTTTAAGAGGTACATCTCTCAATTCAGAGAACTGCACGGAGTGAAAGGATCGCCCTCCACGTaGTCGGTCACACCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: LTRFKRYISQFRELHGVKGSPST*SVTPSS
Trigger: AGAGCTGGGTGTGACCGAGCACGTGGAGGGCGATCC...TTTCACTCCGTGCAGTTCTCTGAATTGAGAGATGTACCTCTTAAACCTCGTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp TACAAAGACAGTCCTTTCCTGAGCCAGGTGCAATTCCAGAGAATGACACTTTGCTGTCTGAGGATGGGGTaGGCCCAGACCACAAGGCGA +
Preference number: 4 (lower is better)
Translates to: YKDSPFLSQVQFQRMTLCCLRMG*AQTTRR
Trigger: TCGCCTTGTGGTCTGGGCGCACCCCATCCTCAGACA...GCAAAGTGTCATTCTCTGGAATTGCACCTGGCTCAGGAAAGGACTGTCTTTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp GGCAGGCTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTCAGCGTTGGCGGCTTaGAGAACAACCCTCTCAGAA +
Preference number: 4 (lower is better)
Translates to: GRLSFQNNSELPVNLRGASALAA*RTTLSE
Trigger: TTCTGAGAGGGTTGTTCTGCAAGCCGCCAACGCTGA...CGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAGCCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp CCCAGGATCATCATCATCTGGGATTCCTTGTTATTTCCAACTTGCTGTGGAGAATCCTGCACCCAGGCCTaGTGGATGTCAGCGTTGGCG +
Preference number: 4 (lower is better)
Translates to: PRIIIIWDSLLFPTCCGESCTQA*WMSALA
Trigger: CGCCAACGCTGACATCCAGCAGGCCTGGGTGCAGGA...TTCTCCACAGCAAGTTGGAAATAACAAGGAATCCCAGATGATGATGATCCTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR GCA 90 bp GGCAGGCTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGGTCACTACTTTCTGCTaGTGTGGCTTTGGTGAGGGG +
Preference number: 4 (lower is better)
Translates to: GRLSFQNNSELPVNLRGAVTTFC*CGFGEG
Trigger: CCCCTCACCAAAGCCACAGCAGCAGAAAGTAGTGAC...CGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAGCCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp ATGTGCGATGGTCCCTATGGGGAAACCTGTCCACTTATGAATAAGGCCCTTTGTTCCTTGTCCCCCACCTaGCGTGGTCTGCACACCATT +
Preference number: 4 (lower is better)
Translates to: MCDGPYGETCPLMNKALCSLSPT*RGLHTI
Trigger: AATGGTGTGCAGACCACGGCAGGTGGGGGACAAGGA...ACAAAGGGCCTTATTCATAAGTGGACAGGTTTCCCCATAGGGACCATCGCACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR CCA 90 bp GGCAGGCTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGCCTCACTTGGCACGCTaGCCAAATACGTCACGAGTT +
Preference number: 4 (lower is better)
Translates to: GRLSFQNNSELPVNLRGAPHLAR*PNTSRV
Trigger: AACTCGTGACGTATTTGGCCAGCGTGCCAAGTGAGG...CGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAGCCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp CTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTCATTTGGGCACCAGGCTCTaGAAGTCAGCACTGCCCGGG +
Preference number: 4 (lower is better)
Translates to: LSFQNNSELPVNLRGAFHLGTRL*KSALPG
Trigger: CCCGGGCAGTGCTGACTTCCAGAGCCTGGTGCCCAA...ATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp CTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTCATGCAGGTGCTGCCGGGTaGAGTGCAGCTTGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: LSFQNNSELPVNLRGAFHAGAAG*SAACPG
Trigger: TCCTGGACAAGCTGCACTCCACCCGGCAGCACCTGC...ATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp GGCAGGCTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTACAAGGTCTGGTGGTaGTGGATTGCCAGCTCTAGG +
Preference number: 4 (lower is better)
Translates to: GRLSFQNNSELPVNLRGAYKVWW*WIASSR
Trigger: CCTAGAGCTGGCAATCCACCACCACCAGACCTTGTA...CGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAGCCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp GGCAGGCTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTGCTCATACAAGGTCTaGTGGTGGTGGATTGCCAGC +
Preference number: 4 (lower is better)
Translates to: GRLSFQNNSELPVNLRGACSYKV*WWWIAS
Trigger: GCTGGCAATCCACCACCACCAGACCTTGTATGAGCA...CGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAGCCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp CCCCATAACCCAGCCAGGGAAATAAGCCCAACTTCAGGACCTCTCAGAAATCAGTGCTCATACAAGGTCTaGTGGTGGTGGATTGCCAGC +
Preference number: 4 (lower is better)
Translates to: PHNPAREISPTSGPLRNQCSYKV*WWWIAS
Trigger: GCTGGCAATCCACCACCACCAGACCTTGTATGAGCA...CTGATTTCTGAGAGGTCCTGAAGTTGGGCTTATTTCCCTGGCTGGGTTATGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp GATAAAGAAACCGAAGCTCACACAAGACCACAAAGCAAGATTTTGCTGAGTCAACAGAGCTGCAGCCGCTaGTGGAGCCGCACCTTGCGG +
Preference number: 4 (lower is better)
Translates to: DKETEAHTRPQSKILLSQQSCSR*WSRTLR
Trigger: CCGCAAGGTGCGGCTCCACCAGCGGCTGCAGCTCTG...TTGACTCAGCAAAATCTTGCTTTGTGGTCTTGTGTGAGCTTCGGTTTCTTTATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439170.2
CDS-3UTR CCA 90 bp AAACTCTGTGTTTGGGGTTGGGGCTCTCTCTTGAGTGTGTTGGAAACTGGAGGAGCGGTCTGCTGCTGCTaGAACTGCTTGATCAGTTCC +
Preference number: 4 (lower is better)
Translates to: KLCVWGWGSLLSVLETGGAVCCC*NCLISS
Trigger: GGAACTGATCAAGCAGTTCCAGCAGCAGCAGACCGC...TCCTCCAGTTTCCAACACACTCAAGAGAGAGCCCCAACCCCAAACACAGAGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp GGCAGGCTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGGAAAGAGGGACTCGATaGCCAGTTGGAACTGCTCGT +
Preference number: 4 (lower is better)
Translates to: GRLSFQNNSELPVNLRGAERGTR*PVGTAR
Trigger: ACGAGCAGTTCCAACTGGCCATCGAGTCCCTCTTTC...CGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAGCCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360013.7
CDS-3UTR CCA 90 bp TGGAGAGAAGCTCAGCAACCTCGAATTGCACCCAGTAGAGAAGAAGGGAGCCCCAGTGCTTGTCCACCGTaGTCACCCATTTCCTTATCT +
Preference number: 4 (lower is better)
Translates to: WREAQQPRIAPSREEGSPSACPP*SPISLS
Trigger: AGATAAGGAAATGGGTGACCACGGTGGACAAGCACT...GGGGCTCCCTTCTTCTCTACTGGGTGCAATTCGAGGTTGCTGAGCTTCTCTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp CCCCATAACCCAGCCAGGGAAATAAGCCCAACTTCAGGACCTCTCAGAAATCAGAGGAAGAGATGGAGTTaGCCAGACCATGCCGCTGTT +
Preference number: 4 (lower is better)
Translates to: PHNPAREISPTSGPLRNQRKRWS*PDHAAV
Trigger: AACAGCGGCATGGTCTGGCCAACTCCATCTCTTCCT...CTGATTTCTGAGAGGTCCTGAAGTTGGGCTTATTTCCCTGGCTGGGTTATGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp GCCAGTGTTTGGGAAAGGCTAAAGTTAACCCTCATCTTCTCTACCACACATCATCCGAGGGTGAGCCCATaGCCCAGGCGGGGAGATTTT +
Preference number: 4 (lower is better)
Translates to: ASVWERLKLTLIFSTTHHPRVSP*PRRGDF
Trigger: AAAATCTCCCCGCCTGGGCCATGGGCTCACCCTCGG...ATGATGTGTGGTAGAGAAGATGAGGGTTAACTTTAGCCTTTCCCAAACACTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp CCCCATAACCCAGCCAGGGAAATAAGCCCAACTTCAGGACCTCTCAGAAATCAGAGTACATTGGGCCATTaGGCCTCTCACAGGTCCCTA +
Preference number: 4 (lower is better)
Translates to: PHNPAREISPTSGPLRNQSTLGH*ASHRSL
Trigger: TAGGGACCTGTGAGAGGCCCAATGGCCCAATGTACT...CTGATTTCTGAGAGGTCCTGAAGTTGGGCTTATTTCCCTGGCTGGGTTATGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp TGGAGAGAAGCTCAGCAACCTCGAATTGCACCCAGTAGAGAAGAAGGGAGCCCCATGAAACTCTGTGTTTaGGGTTGGGGCTCTCTCTTG +
Preference number: 4 (lower is better)
Translates to: WREAQQPRIAPSREEGSPMKLCV*GWGSLL
Trigger: CAAGAGAGAGCCCCAACCCCAAACACAGAGTTTCAT...GGGGCTCCCTTCTTCTCTACTGGGTGCAATTCGAGGTTGCTGAGCTTCTCTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp CCCAGGATCATCATCATCTGGGATTCCTTGTTATTTCCAACTTGCTGTGGAGAAGGACCCGGGGAACTGTaGATGGAGTTCAGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: PRIIIIWDSLLFPTCCGEGPGEL*MEFREG
Trigger: GCCCTCCCTGAACTCCATCCACAGTTCCCCGGGTCC...TTCTCCACAGCAAGTTGGAAATAACAAGGAATCCCAGATGATGATGATCCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR CCA 90 bp CTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTCATGGACCCGGGGAACTGTaGATGGAGTTCAGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: LSFQNNSELPVNLRGAFHGPGEL*MEFREG
Trigger: GCCCTCCCTGAACTCCATCCACAGTTCCCCGGGTCC...ATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp GTAAAAGCTGATATGAAAGCTTGGGGTCTGTCTAACATTCTGTCAACTGCCCCCTGTTGGTGGAGCGCTTaGGACCCGGGGAACTGTGGA +
Preference number: 4 (lower is better)
Translates to: VKADMKAWGLSNILSTAPCWWSA*DPGNCG
Trigger: TCCACAGTTCCCCGGGTCCCAAGCGCTCCACCAACA...GGGGGCAGTTGACAGAATGTTAGACAGACCCCAAGCTTTCATATCAGCTTTTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR CCA 90 bp GGCAGGCTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTCATCCCCAGGCTTaGGAGATCCCAGGTCAAAGC +
Preference number: 4 (lower is better)
Translates to: GRLSFQNNSELPVNLRGAFHPQA*EIPGQS
Trigger: GCTTTGACCTGGGATCTCCCAAGCCTGGGGATGAAA...CGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAGCCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp CTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTCATTGCACCCAGGCCTGCTaGATGTCAGCGTTGGCGGCT +
Preference number: 4 (lower is better)
Translates to: LSFQNNSELPVNLRGAFHCTQAC*MSALAA
Trigger: AGCCGCCAACGCTGACATCCAGCAGGCCTGGGTGCA...ATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp GTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACCAGGCCTTTCGGCGGCGGGGGAATaGTCGCTGGCAGGCTGGTAC +
Preference number: 4 (lower is better)
Translates to: VMYQVLFHGFKKDLEPGLSAAGE*SLAGWY
Trigger: GTACCAGCCTGCCAGCGACCATTCCCCCGCCGCCGA...AAGGCCTGGTTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp CTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTCATGATGCTGCAAGCATGTaGCTGCTGTGGGCCGCCTCC +
Preference number: 4 (lower is better)
Translates to: LSFQNNSELPVNLRGAFHDAASM*LLWAAS
Trigger: GGAGGCGGCCCACAGCAGCCACATGCTTGCAGCATC...ATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp CTGACGAGGTTTAAGAGGTACATCTCTCAATTCAGAGAACTGCACGGAGTGAAAGCGGGCTCCGTTCGGTaGTACGGACCAGACACCAAC +
Preference number: 4 (lower is better)
Translates to: LTRFKRYISQFRELHGVKAGSVR*YGPDTN
Trigger: GTTGGTGTCTGGTCCGTACCACCGAACGGAGCCCGC...TTTCACTCCGTGCAGTTCTCTGAATTGAGAGATGTACCTCTTAAACCTCGTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp GATAAAGAAACCGAAGCTCACACAAGACCACAAAGCAAGATTTTGCTGAGTCAACTGCCCATGCTGACCTaGCCTCGCTGGGCTCCCCGA +
Preference number: 4 (lower is better)
Translates to: DKETEAHTRPQSKILLSQLPMLT*PRWAPR
Trigger: TCGGGGAGCCCAGCGAGGCCAGGTCAGCATGGGCAG...TTGACTCAGCAAAATCTTGCTTTGTGGTCTTGTGTGAGCTTCGGTTTCTTTATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439170.2
CDS-3UTR TCA 90 bp CATTTTAGACTTTGGAGAGAAGCTCAGCAACCTCGAATTGCACCCAGTAGAGAAGGTGCACGGCGCTGTTaGAGAACTCCTCCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: HFRLWREAQQPRIAPSREGARRC*RTPPGR
Trigger: TCTCCCTGGAGGAGTTCTTCAACAGCGCCGTGCACC...TTCTCTACTGGGTGCAATTCGAGGTTGCTGAGCTTCTCTCCAAAGTCTAAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR TCA 90 bp CTGACGAGGTTTAAGAGGTACATCTCTCAATTCAGAGAACTGCACGGAGTGAAAGGTGCACGGCGCTGTTaGAGAACTCCTCCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: LTRFKRYISQFRELHGVKGARRC*RTPPGR
Trigger: TCTCCCTGGAGGAGTTCTTCAACAGCGCCGTGCACC...TTTCACTCCGTGCAGTTCTCTGAATTGAGAGATGTACCTCTTAAACCTCGTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp AAACTCTGTGTTTGGGGTTGGGGCTCTCTCTTGAGTGTGTTGGAAACTGGAGGAGGAAGATGTCCAGCTTaGTCTTCCGCTCGTGGAACA +
Preference number: 4 (lower is better)
Translates to: KLCVWGWGSLLSVLETGGGRCPA*SSARGT
Trigger: TGTTCCACGAGCGGAAGATCAAGCTGGACATCTTCC...TCCTCCAGTTTCCAACACACTCAAGAGAGAGCCCCAACCCCAAACACAGAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR TCA 90 bp GGCAGGCTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGGAGTCTGCTCTGCATTaGGCTCCAATTCATGCTGCT +
Preference number: 4 (lower is better)
Translates to: GRLSFQNNSELPVNLRGAESALH*APIHAA
Trigger: AGCAGCATGAATTGGAGCTCAATGCAGAGCAGACTC...CGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAGCCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp AAACTCTGTGTTTGGGGTTGGGGCTCTCTCTTGAGTGTGTTGGAAACTGGAGGAATCCCAGAACCTGTTTaGCTTCAGCCTGGAGGTGAC +
Preference number: 4 (lower is better)
Translates to: KLCVWGWGSLLSVLETGGIPEPV*LQPGGD
Trigger: GTCACCTCCAGGCTGAAGTCAAACAGGTTCTGGGAT...TCCTCCAGTTTCCAACACACTCAAGAGAGAGCCCCAACCCCAAACACAGAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR TCA 90 bp TACAAAGACAGTCCTTTCCTGAGCCAGGTGCAATTCCAGAGAATGACACTTTGCCTTCCATCTTCAGCATaGGCTGCTGCCAGTGGAGGG +
Preference number: 4 (lower is better)
Translates to: YKDSPFLSQVQFQRMTLCLPSSA*AAASGG
Trigger: CCCTCCACTGGCAGCAGCTCATGCTGAAGATGGAAG...GCAAAGTGTCATTCTCTGGAATTGCACCTGGCTCAGGAAAGGACTGTCTTTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR TCA 90 bp TGGAGAGAAGCTCAGCAACCTCGAATTGCACCCAGTAGAGAAGAAGGGAGCCCCTATTATCCTCTGTGTTaGCTCCTAGGGCTTTCTCCA +
Preference number: 4 (lower is better)
Translates to: WREAQQPRIAPSREEGSPYYPLC*LLGLSP
Trigger: TGGAGAAAGCCCTAGGAGTCAACACAGAGGATAATA...GGGGCTCCCTTCTTCTCTACTGGGTGCAATTCGAGGTTGCTGAGCTTCTCTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR TCA 90 bp GTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACCAGGCCTTTGGCGTCCCGCAGCTTaGCCTCCCGATCCGAAAGGC +
Preference number: 4 (lower is better)
Translates to: VMYQVLFHGFKKDLEPGLWRPAA*PPDPKG
Trigger: GCCTTTCGGATCGGGAGGTCAAGCTGCGGGACGCCA...AAGGCCTGGTTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp CCCCATAACCCAGCCAGGGAAATAAGCCCAACTTCAGGACCTCTCAGAAATCAGGGTGTTTTGGGGAGCTaGAGTGGCTCCTTTAAAGCT +
Preference number: 4 (lower is better)
Translates to: PHNPAREISPTSGPLRNQGVLGS*SGSFKA
Trigger: AGCTTTAAAGGAGCCACTTCAGCTCCCCAAAACACC...CTGATTTCTGAGAGGTCCTGAAGTTGGGCTTATTTCCCTGGCTGGGTTATGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR TCA 90 bp GGCAGGCTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGCTGTCCACTGTGTTCTaGGAGGTCCTAGAAGCAATG +
Preference number: 4 (lower is better)
Translates to: GRLSFQNNSELPVNLRGALSTVF*EVLEAM
Trigger: CATTGCTTCTAGGACCTCTCAGAACACAGTGGACAG...CGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAGCCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp GGCAGGCTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGGCCTCCATTCTCGCTTaGGGAATGAGAGTATGCATC +
Preference number: 4 (lower is better)
Translates to: GRLSFQNNSELPVNLRGAASILA*GMRVCI
Trigger: GATGCATACTCTCATTCCTCAAGCGAGAATGGAGGC...CGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAGCCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp ATTCAGGTCATCCACAGTGGACAGAACAGAACTTGCCAAGCTGGACTTTATGGATCAGCGCTGTCTCCCTaGGGGGTTGTTTCATCCCCA +
Preference number: 4 (lower is better)
Translates to: IQVIHSGQNRTCQAGLYGSALSP*GVVSSP
Trigger: TGGGGATGAAACAACCCCTCAGGGAGACAGCGCTGA...TCCATAAAGTCCAGCTTGGCAAGTTCTGTTCTGTCCACTGTGGATGACCTGAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR TCA 90 bp CTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTCATTGCAGCAGCTTCCCCTaGGCAGTCAGAGTGCCCTCA +
Preference number: 4 (lower is better)
Translates to: LSFQNNSELPVNLRGAFHCSSFP*AVRVPS
Trigger: TGAGGGCACTCTGACTGCTCAGGGGAAGCTGCTGCA...ATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp GTAAAAGCTGATATGAAAGCTTGGGGTCTGTCTAACATTCTGTCAACTGCCCCCAGACCTCTGAGGGAGTaGGGCTTTATGACCCAGGGC +
Preference number: 4 (lower is better)
Translates to: VKADMKAWGLSNILSTAPRPLRE*GFMTQG
Trigger: GCCCTGGGTCATAAAGCCTCACTCCCTCAGAGGTCT...GGGGGCAGTTGACAGAATGTTAGACAGACCCCAAGCTTTCATATCAGCTTTTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR TCA 90 bp ACAGATAAAGAAACCGAAGCTCACACAAGACCACAAAGCAAGATTTTGCTGAGTAAGCTCTGCCCATGCTaGCCTGGCCTCGCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: TDKETEAHTRPQSKILLSKLCPC*PGLAGL
Trigger: GAGCCCAGCGAGGCCAGGTCAGCATGGGCAGAGCTT...ACTCAGCAAAATCTTGCTTTGTGGTCTTGTGTGAGCTTCGGTTTCTTTATCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439170.2
CDS-3UTR GCA 90 bp TACAAAGACAGTCCTTTCCTGAGCCAGGTGCAATTCCAGAGAATGACACTTTGCGCTGGAAAGGCTTCCTaGAGCGTTTTGAGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: YKDSPFLSQVQFQRMTLCAGKAS*SVLRRG
Trigger: GCCCCTCCTCAAAACGCTGCAGGAAGCCTTTCCAGC...GCAAAGTGTCATTCTCTGGAATTGCACCTGGCTCAGGAAAGGACTGTCTTTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp CTGACGAGGTTTAAGAGGTACATCTCTCAATTCAGAGAACTGCACGGAGTGAAAAGGCGCGAGAGCAGGTaGACGGCGCTGTTGAAGAAC +
Preference number: 4 (lower is better)
Translates to: LTRFKRYISQFRELHGVKRRESR*TALLKN
Trigger: GTTCTTCAACAGCGCCGTGCACCTGCTCTCGCGCCT...TTTCACTCCGTGCAGTTCTCTGAATTGAGAGATGTACCTCTTAAACCTCGTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp GCCAGTGTTTGGGAAAGGCTAAAGTTAACCCTCATCTTCTCTACCACACATCATAGGCGCGAGAGCAGGTaGACGGCGCTGTTGAAGAAC +
Preference number: 4 (lower is better)
Translates to: ASVWERLKLTLIFSTTHHRRESR*TALLKN
Trigger: GTTCTTCAACAGCGCCGTGCACCTGCTCTCGCGCCT...ATGATGTGTGGTAGAGAAGATGAGGGTTAACTTTAGCCTTTCCCAAACACTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp TCTGTTAGGGTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACACTGCAGCAGCCGCTaGCCCTCCCGGTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: SVRVMYQVLFHGFKKDLEHCSSR*PSRSSS
Trigger: GGAGCTGGACCGGGAGGGGCAGCGGCTGCTGCAGTG...TTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCACCCTAACAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp TATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAACGTCGCTGCAGCGGATaGACTGCAGCAGCCGCTGCC +
Preference number: 4 (lower is better)
Translates to: YLQSHSVLLWFTLHVYVKRRCSG*TAAAAA
Trigger: GGCAGCGGCTGCTGCAGTGCATCCGCTGCAGCGACG...TTTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp CTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTCATCTGAGAAGCCGTCGCTaGAGCGGATGCACTGCAGCA +
Preference number: 4 (lower is better)
Translates to: LSFQNNSELPVNLRGAFHLRSRR*SGCTAA
Trigger: TGCTGCAGTGCATCCGCTGCAGCGACGGCTTCTCAG...ATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp CATTTTAGACTTTGGAGAGAAGCTCAGCAACCTCGAATTGCACCCAGTAGAGAATGCTGCCGGGTGGAGTaGAGCTTGTCCAGGAGACTG +
Preference number: 4 (lower is better)
Translates to: HFRLWREAQQPRIAPSRECCRVE*SLSRRL
Trigger: CAGTCTCCTGGACAAGCTGCACTCCACCCGGCAGCA...TTCTCTACTGGGTGCAATTCGAGGTTGCTGAGCTTCTCTCCAAAGTCTAAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp CTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTCATTGCTGCCGGGTGGAGTaGAGCTTGTCCAGGAGACTG +
Preference number: 4 (lower is better)
Translates to: LSFQNNSELPVNLRGAFHCCRVE*SLSRRL
Trigger: CAGTCTCCTGGACAAGCTGCACTCCACCCGGCAGCA...ATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp TACAAAGACAGTCCTTTCCTGAGCCAGGTGCAATTCCAGAGAATGACACTTTGCTCATCATGCCTCTTCTaGAGGGCCCGGGCTCGATGT +
Preference number: 4 (lower is better)
Translates to: YKDSPFLSQVQFQRMTLCSSCLF*RARARC
Trigger: ACATCGAGCCCGGGCCCTGCAGAAGAGGCATGATGA...GCAAAGTGTCATTCTCTGGAATTGCACCTGGCTCAGGAAAGGACTGTCTTTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp CTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTCATTCCGCTGCTCCACCCTaGGCACGAAGTCTTGGATGC +
Preference number: 4 (lower is better)
Translates to: LSFQNNSELPVNLRGAFHSAAPP*ARSLGC
Trigger: GCATCCAAGACTTCGTGCGCAGGGTGGAGCAGCGGA...ATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp TGGAGAGAAGCTCAGCAACCTCGAATTGCACCCAGTAGAGAAGAAGGGAGCCCCTGCATCCACAGAATCTaGACAGACATCCTCCAACAT +
Preference number: 4 (lower is better)
Translates to: WREAQQPRIAPSREEGSPCIHRI*TDILQH
Trigger: ATGTTGGAGGATGTCTGTGCAGATTCTGTGGATGCA...GGGGCTCCCTTCTTCTCTACTGGGTGCAATTCGAGGTTGCTGAGCTTCTCTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp CCCCATAACCCAGCCAGGGAAATAAGCCCAACTTCAGGACCTCTCAGAAATCAGTGCAGATCCTGTCCCTaGTGGATAACCTCAAAGGTC +
Preference number: 4 (lower is better)
Translates to: PHNPAREISPTSGPLRNQCRSCP*WITSKV
Trigger: GACCTTTGAGGTTATCCAGCAGGGACAGGATCTGCA...CTGATTTCTGAGAGGTCCTGAAGTTGGGCTTATTTCCCTGGCTGGGTTATGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp TACAAAGACAGTCCTTTCCTGAGCCAGGTGCAATTCCAGAGAATGACACTTTGCTTCAGCATGAGCTGCTaGCAGTGGAGGGCCACCTTC +
Preference number: 4 (lower is better)
Translates to: YKDSPFLSQVQFQRMTLCFSMSC*QWRATF
Trigger: GAAGGTGGCCCTCCACTGGCAGCAGCTCATGCTGAA...GCAAAGTGTCATTCTCTGGAATTGCACCTGGCTCAGGAAAGGACTGTCTTTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp GGCAGGCTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGGAGTTGGCCAGACCATaGCGCTGTTGTATCTCATCA +
Preference number: 4 (lower is better)
Translates to: GRLSFQNNSELPVNLRGAELARP*RCCISS
Trigger: TGATGAGATACAACAGCGGCATGGTCTGGCCAACTC...CGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAGCCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp CTGACGAGGTTTAAGAGGTACATCTCTCAATTCAGAGAACTGCACGGAGTGAAATCAAAGAGGAACAAGTaGCGCTCCCGCCCCTTCCGG +
Preference number: 4 (lower is better)
Translates to: LTRFKRYISQFRELHGVKSKRNK*RSRPFR
Trigger: CCGGAAGGGGCGGGAGCGGCACTTGTTCCTCTTTGA...TTTCACTCCGTGCAGTTCTCTGAATTGAGAGATGTACCTCTTAAACCTCGTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp CTGACGAGGTTTAAGAGGTACATCTCTCAATTCAGAGAACTGCACGGAGTGAAATGGTGTCTGGTTGGCTaGTCCCATCCCCCTGGCTGT +
Preference number: 4 (lower is better)
Translates to: LTRFKRYISQFRELHGVKWCLVG*SHPPGC
Trigger: ACAGCCAGGGGGATGGGAGCAGCCAACCAGACACCA...TTTCACTCCGTGCAGTTCTCTGAATTGAGAGATGTACCTCTTAAACCTCGTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp GGCAGGCTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGCACCCCAACCTTTCTTaGTCTTCTCATCAGCGCTGT +
Preference number: 4 (lower is better)
Translates to: GRLSFQNNSELPVNLRGAHPNLS*SSHQRC
Trigger: ACAGCGCTGATGAGAAGAGCAAGAAAGGTTGGGGTG...CGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAGCCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp GGCAGGCTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGCCACAGACTTTGCACTaGAGTATCACTGTGTCCCCA +
Preference number: 4 (lower is better)
Translates to: GRLSFQNNSELPVNLRGAPQTLH*SITVSP
Trigger: TGGGGACACAGTGATACTGCAGTGCAAAGTCTGTGG...CGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAGCCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp GGCAGGCTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGGCTGCTGGAACACCTTaGACTTTGACTGTTGCAGAC +
Preference number: 4 (lower is better)
Translates to: GRLSFQNNSELPVNLRGAAAGTP*TLTVAD
Trigger: GTCTGCAACAGTCAAAGTGCAAGGTGTTCCAGCAGC...CGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAGCCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp GTAAAAGCTGATATGAAAGCTTGGGGTCTGTCTAACATTCTGTCAACTGCCCCCGGGGCGGTTAGGGGCTaGTGGAACACCTTGCACTTT +
Preference number: 4 (lower is better)
Translates to: VKADMKAWGLSNILSTAPGAVRG*WNTLHF
Trigger: AAAGTGCAAGGTGTTCCAGCAGCCCCTAACCGCCCC...GGGGGCAGTTGACAGAATGTTAGACAGACCCCAAGCTTTCATATCAGCTTTTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR GCA 90 bp CTGACGAGGTTTAAGAGGTACATCTCTCAATTCAGAGAACTGCACGGAGTGAAATTCGGGAGTGTGAGATaGACAGGGCGCTGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: LTRFKRYISQFRELHGVKFGSVR*TGRCWG
Trigger: TCCCCAGCAGCGCCCTGTGCATCTCACACTCCCGAA...TTTCACTCCGTGCAGTTCTCTGAATTGAGAGATGTACCTCTTAAACCTCGTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp AAACTCTGTGTTTGGGGTTGGGGCTCTCTCTTGAGTGTGTTGGAAACTGGAGGAACTCCGATCTCCGTGTaGCTCTGGAGGAATAACTCC +
Preference number: 4 (lower is better)
Translates to: KLCVWGWGSLLSVLETGGTPISV*LWRNNS
Trigger: GGAGTTATTCCTCCAGAGCCACACGGAGATCGGAGT...TCCTCCAGTTTCCAACACACTCAAGAGAGAGCCCCAACCCCAAACACAGAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp AAACTCTGTGTTTGGGGTTGGGGCTCTCTCTTGAGTGTGTTGGAAACTGGAGGAAAGGTCTGGTGGTGGTaGATTGCCAGCTCTAGGTCT +
Preference number: 4 (lower is better)
Translates to: KLCVWGWGSLLSVLETGGKVWWW*IASSRS
Trigger: AGACCTAGAGCTGGCAATCCACCACCACCAGACCTT...TCCTCCAGTTTCCAACACACTCAAGAGAGAGCCCCAACCCCAAACACAGAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp GGCAGGCTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTCATACAAGGTCTGGTaGTGGTGGATTGCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: GRLSFQNNSELPVNLRGASYKVW*WWIASS
Trigger: AGAGCTGGCAATCCACCACCACCAGACCTTGTATGA...CGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAGCCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp CCCCATAACCCAGCCAGGGAAATAAGCCCAACTTCAGGACCTCTCAGAAATCAGGGAGCTTGTCCGCATTaGTGTACGTATTCTGAGCCA +
Preference number: 4 (lower is better)
Translates to: PHNPAREISPTSGPLRNQGACPH*CTYSEP
Trigger: TGGCTCAGAATACGTACACCAATGCGGACAAGCTCC...CTGATTTCTGAGAGGTCCTGAAGTTGGGCTTATTTCCCTGGCTGGGTTATGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp TGGAGAGAAGCTCAGCAACCTCGAATTGCACCCAGTAGAGAAGAAGGGAGCCCCTCTTTGGTGTGTGTGTaGAAGGAAACAGACATGTCC +
Preference number: 4 (lower is better)
Translates to: WREAQQPRIAPSREEGSPSLVCV*KETDMS
Trigger: GGACATGTCTGTTTCCTTCCACACACACACCAAAGA...GGGGCTCCCTTCTTCTCTACTGGGTGCAATTCGAGGTTGCTGAGCTTCTCTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp CAGCAATTCTCAGTCATGCAAATGCCCGTGTTAAAGTTCTCCATTGGATTTAAAACACAGCCGAGTCCCTaGCCTCGCTGGGCTCCCCGA +
Preference number: 4 (lower is better)
Translates to: QQFSVMQMPVLKFSIGFKTQPSP*PRWAPR
Trigger: TCGGGGAGCCCAGCGAGGCCAGGGACTCGGCTGTGT...TTTAAATCCAATGGAGAACTTTAACACGGGCATTTGCATGACTGAGAATTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp CCCCATAACCCAGCCAGGGAAATAAGCCCAACTTCAGGACCTCTCAGAAATCAGGTTCCTCTGTTTGGCTaGTGTTTTGGGGAGCTGAAG +
Preference number: 4 (lower is better)
Translates to: PHNPAREISPTSGPLRNQVPLFG*CFGELK
Trigger: CTTCAGCTCCCCAAAACACCAGCCAAACAGAGGAAC...CTGATTTCTGAGAGGTCCTGAAGTTGGGCTTATTTCCCTGGCTGGGTTATGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp CTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTCATGAGATGGTGTCTGGTTaGCTGCTCCCATCCCCCTGG +
Preference number: 4 (lower is better)
Translates to: LSFQNNSELPVNLRGAFHEMVSG*LLPSPW
Trigger: CCAGGGGGATGGGAGCAGCCAACCAGACACCATCTC...ATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp GCCAGTGTTTGGGAAAGGCTAAAGTTAACCCTCATCTTCTCTACCACACATCATGAGATGGTGTCTGGTTaGCTGCTCCCATCCCCCTGG +
Preference number: 4 (lower is better)
Translates to: ASVWERLKLTLIFSTTHHEMVSG*LLPSPW
Trigger: CCAGGGGGATGGGAGCAGCCAACCAGACACCATCTC...ATGATGTGTGGTAGAGAAGATGAGGGTTAACTTTAGCCTTTCCCAAACACTGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp CCCCATAACCCAGCCAGGGAAATAAGCCCAACTTCAGGACCTCTCAGAAATCAGAAGTCTCAAGAGAGGTaGGTGATTGGAGTCCTGGTG +
Preference number: 4 (lower is better)
Translates to: PHNPAREISPTSGPLRNQKSQER*VIGVLV
Trigger: CACCAGGACTCCAATCACCCACCTCTCTTGAGACTT...CTGATTTCTGAGAGGTCCTGAAGTTGGGCTTATTTCCCTGGCTGGGTTATGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp AAACTCTGTGTTTGGGGTTGGGGCTCTCTCTTGAGTGTGTTGGAAACTGGAGGAGTTCTGAGTGGGATCTaGGGGAAGTACATTGGGCCA +
Preference number: 4 (lower is better)
Translates to: KLCVWGWGSLLSVLETGGVLSGI*GKYIGP
Trigger: TGGCCCAATGTACTTCCCCCAGATCCCACTCAGAAC...TCCTCCAGTTTCCAACACACTCAAGAGAGAGCCCCAACCCCAAACACAGAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp GGCAGGCTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGGGGCACAAGGAATTCTaGGGCCACTTCTTGGATGAA +
Preference number: 4 (lower is better)
Translates to: GRLSFQNNSELPVNLRGAGHKEF*GHFLDE
Trigger: TTCATCCAAGAAGTGGCCCCAGAATTCCTTGTGCCC...CGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAGCCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp GGCAGGCTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGGTGTCAAGGATGTTCTaGTCTGGACCCTTCCAAGTG +
Preference number: 4 (lower is better)
Translates to: GRLSFQNNSELPVNLRGAVSRMF*SGPFQV
Trigger: CACTTGGAAGGGTCCAGACCAGAACATCCTTGACAC...CGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAGCCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp CTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTCATGTGCAGCTTCTCTCCTaGGCAATGGGGCGGTTAGGG +
Preference number: 4 (lower is better)
Translates to: LSFQNNSELPVNLRGAFHVQLLS*AMGRLG
Trigger: CCCTAACCGCCCCATTGCCCAGGAGAGAAGCTGCAC...ATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp CTGACGAGGTTTAAGAGGTACATCTCTCAATTCAGAGAACTGCACGGAGTGAAAACCTGCAGGGCACTCTaGTGCGTCTTCTCGATGGCC +
Preference number: 4 (lower is better)
Translates to: LTRFKRYISQFRELHGVKTCRAL*CVFSMA
Trigger: GGCCATCGAGAAGACGCACCAGAGTGCCCTGCAGGT...TTTCACTCCGTGCAGTTCTCTGAATTGAGAGATGTACCTCTTAAACCTCGTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354186.8
CDS-3UTR CCA 90 bp GCCAGTGTTTGGGAAAGGCTAAAGTTAACCCTCATCTTCTCTACCACACATCATACCTGCAGGGCACTCTaGTGCGTCTTCTCGATGGCC +
Preference number: 4 (lower is better)
Translates to: ASVWERLKLTLIFSTTHHTCRAL*CVFSMA
Trigger: GGCCATCGAGAAGACGCACCAGAGTGCCCTGCAGGT...ATGATGTGTGGTAGAGAAGATGAGGGTTAACTTTAGCCTTTCCCAAACACTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460856.5
CDS-3UTR CCA 90 bp CTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTCATGTCAGCTCACTGCTGTaGCCCGCACTGAAGTCCTGG +
Preference number: 4 (lower is better)
Translates to: LSFQNNSELPVNLRGAFHVSSLL*PALKSW
Trigger: CCAGGACTTCAGTGCGGGCCACAGCAGTGAGCTGAC...ATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp CTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTCATTCTGCCCCACCTGGATaGTCAGCTCACTGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: LSFQNNSELPVNLRGAFHSAPPG*SAHCCG
Trigger: GCCACAGCAGTGAGCTGACCATCCAGGTGGGGCAGA...ATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
3UTR CAA 72 bp ATTTTAGACTTTGGAGAGAAGCTCAGCAACCTCGAATaGCACCCAGTAGAGAAGAAGGGAGCCCCGAGGGTG +
Preference number: 4 (lower is better)
Translates to: ILDFGEKLSNLE*HPVEKKGAPRV
Trigger: CACCCTCGGGGCTCCCTTCTTCTCTACTGGGTGCAATTCGAGGTTGCTGAGCTTCTCTCCAAAGTCTAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR TCA 90 bp GTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACCAGGCCTTTCATCCCACCACCGCTaGCTCGAGGAGGCCGGAATC +
Preference number: 4 (lower is better)
Translates to: VMYQVLFHGFKKDLEPGLSSHHR*LEEAGI
Trigger: GATTCCGGCCTCCTCGAGTCAGCGGTGGTGGGATGA...AAGGCCTGGTTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360013.7
CDS-3UTR TCA 90 bp AAACTCTGTGTTTGGGGTTGGGGCTCTCTCTTGAGTGTGTTGGAAACTGGAGGACTGCTTGATTTGTTGTaGGGCATAATGACCGGCCTC +
Preference number: 4 (lower is better)
Translates to: KLCVWGWGSLLSVLETGGLLDLL*GIMTGL
Trigger: GAGGCCGGTCATTATGCCTCACAACAAATCAAGCAG...TCCTCCAGTTTCCAACACACTCAAGAGAGAGCCCCAACCCCAAACACAGAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR TCA 90 bp GCCAGTGTTTGGGAAAGGCTAAAGTTAACCCTCATCTTCTCTACCACACATCATTCCAGCCGTCGCTGGTaGTGTAACACCTCATGCACC +
Preference number: 4 (lower is better)
Translates to: ASVWERLKLTLIFSTTHHSSRRW*CNTSCT
Trigger: GGTGCATGAGGTGTTACATCACCAGCGACGGCTGGA...ATGATGTGTGGTAGAGAAGATGAGGGTTAACTTTAGCCTTTCCCAAACACTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR TCA 90 bp CTGACGAGGTTTAAGAGGTACATCTCTCAATTCAGAGAACTGCACGGAGTGAAATCCAGCCGTCGCTGGTaGTGTAACACCTCATGCACC +
Preference number: 4 (lower is better)
Translates to: LTRFKRYISQFRELHGVKSSRRW*CNTSCT
Trigger: GGTGCATGAGGTGTTACATCACCAGCGACGGCTGGA...TTTCACTCCGTGCAGTTCTCTGAATTGAGAGATGTACCTCTTAAACCTCGTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp TACAAAGACAGTCCTTTCCTGAGCCAGGTGCAATTCCAGAGAATGACACTTTGCATGCCTGGACCTCCGTaGTGTACTGGTGCAGATCCT +
Preference number: 4 (lower is better)
Translates to: YKDSPFLSQVQFQRMTLCMPGPP*CTGADP
Trigger: AGGATCTGCACCAGTACATCACGGAGGTCCAGGCAT...GCAAAGTGTCATTCTCTGGAATTGCACCTGGCTCAGGAAAGGACTGTCTTTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR TCA 90 bp AAACTCTGTGTTTGGGGTTGGGGCTCTCTCTTGAGTGTGTTGGAAACTGGAGGAGAGTCTGCTCTGCATTaGGCTCCAATTCATGCTGCT +
Preference number: 4 (lower is better)
Translates to: KLCVWGWGSLLSVLETGGESALH*APIHAA
Trigger: AGCAGCATGAATTGGAGCTCAATGCAGAGCAGACTC...TCCTCCAGTTTCCAACACACTCAAGAGAGAGCCCCAACCCCAAACACAGAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR TCA 90 bp TACAAAGACAGTCCTTTCCTGAGCCAGGTGCAATTCCAGAGAATGACACTTTGCACTTCAGCCTGGAGGTaGCGTAATTGGAGGCACTGC +
Preference number: 4 (lower is better)
Translates to: YKDSPFLSQVQFQRMTLCTSAWR*RNWRHC
Trigger: GCAGTGCCTCCAATTACGTCACCTCCAGGCTGAAGT...GCAAAGTGTCATTCTCTGGAATTGCACCTGGCTCAGGAAAGGACTGTCTTTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR TCA 90 bp TACAAAGACAGTCCTTTCCTGAGCCAGGTGCAATTCCAGAGAATGACACTTTGCTGCAAGGAAGTGGCATaGAAGAGGGACTCGATGGCC +
Preference number: 4 (lower is better)
Translates to: YKDSPFLSQVQFQRMTLCCKEVA*KRDSMA
Trigger: GGCCATCGAGTCCCTCTTTCATGCCACTTCCTTGCA...GCAAAGTGTCATTCTCTGGAATTGCACCTGGCTCAGGAAAGGACTGTCTTTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240874.7
CDS-3UTR TCA 90 bp GGCAGGCTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTCCTGTGGATGTACTTaGGAAACACCTCAGCATTCC +
Preference number: 4 (lower is better)
Translates to: GRLSFQNNSELPVNLRGASCGCT*ETPQHS
Trigger: GGAATGCTGAGGTGTTTCTCAAGTACATCCACAGGA...CGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAGCCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp TGGAGAGAAGCTCAGCAACCTCGAATTGCACCCAGTAGAGAAGAAGGGAGCCCCAGTGGAGGTATGTGTTaGGAGGTAAAATTCACCTGT +
Preference number: 4 (lower is better)
Translates to: WREAQQPRIAPSREEGSPSGGMC*EVKFTC
Trigger: ACAGGTGAATTTTACCTCTCAACACATACCTCCACT...GGGGCTCCCTTCTTCTCTACTGGGTGCAATTCGAGGTTGCTGAGCTTCTCTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR TCA 90 bp AAACTCTGTGTTTGGGGTTGGGGCTCTCTCTTGAGTGTGTTGGAAACTGGAGGAGCTTGGCAGGCACCCTaGATTCCCCATATTCTTTCA +
Preference number: 4 (lower is better)
Translates to: KLCVWGWGSLLSVLETGGAWQAP*IPHILS
Trigger: TGAAAGAATATGGGGAATTCAGGGTGCCTGCCAAGC...TCCTCCAGTTTCCAACACACTCAAGAGAGAGCCCCAACCCCAAACACAGAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR TCA 90 bp CCCCATAACCCAGCCAGGGAAATAAGCCCAACTTCAGGACCTCTCAGAAATCAGCTTATCTCCGTGGCATaGATGTGGCCTTTTTCCACA +
Preference number: 4 (lower is better)
Translates to: PHNPAREISPTSGPLRNQLISVA*MWPFST
Trigger: TGTGGAAAAAGGCCACATTCATGCCACGGAGATAAG...CTGATTTCTGAGAGGTCCTGAAGTTGGGCTTATTTCCCTGGCTGGGTTATGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR TCA 90 bp GGCAGGCTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGCTTATCTCCGTGGCATaGATGTGGCCTTTTTCCACA +
Preference number: 4 (lower is better)
Translates to: GRLSFQNNSELPVNLRGALISVA*MWPFST
Trigger: TGTGGAAAAAGGCCACATTCATGCCACGGAGATAAG...CGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAGCCTGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp TATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAATGGCGTCCCGCAGCTTaGCCTCCCGATCCGAAAGGC +
Preference number: 4 (lower is better)
Translates to: YLQSHSVLLWFTLHVYVKWRPAA*PPDPKG
Trigger: GCCTTTCGGATCGGGAGGTCAAGCTGCGGGACGCCA...TTTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp AAACTCTGTGTTTGGGGTTGGGGCTCTCTCTTGAGTGTGTTGGAAACTGGAGGAGGTGTTTTGGGGAGCTaGAGTGGCTCCTTTAAAGCT +
Preference number: 4 (lower is better)
Translates to: KLCVWGWGSLLSVLETGGGVLGS*SGSFKA
Trigger: AGCTTTAAAGGAGCCACTTCAGCTCCCCAAAACACC...TCCTCCAGTTTCCAACACACTCAAGAGAGAGCCCCAACCCCAAACACAGAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR TCA 90 bp GCCAGTGTTTGGGAAAGGCTAAAGTTAACCCTCATCTTCTCTACCACACATCATGACCTCGGGAGGGAGTaGGGTTATGGAGGAGCTAGA +
Preference number: 4 (lower is better)
Translates to: ASVWERLKLTLIFSTTHHDLGRE*GYGGAR
Trigger: TCTAGCTCCTCCATAACCTCACTCCCTCCCGAGGTC...ATGATGTGTGGTAGAGAAGATGAGGGTTAACTTTAGCCTTTCCCAAACACTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR TCA 90 bp AAACTCTGTGTTTGGGGTTGGGGCTCTCTCTTGAGTGTGTTGGAAACTGGAGGAGGTGTGGGGTTTCCATaGAACTCTGTGTTTGGGGTT +
Preference number: 4 (lower is better)
Translates to: KLCVWGWGSLLSVLETGGGVGFP*NSVFGV
Trigger: AACCCCAAACACAGAGTTTCATGGAAACCCCACACC...TCCTCCAGTTTCCAACACACTCAAGAGAGAGCCCCAACCCCAAACACAGAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR TCA 90 bp GCTCCCTCATATTCTCACAAATCTAAATTGCCATGCTCTTCCACAGAGGCAAGATGGGAGGGGTGTGTGTaGCTCTTCATCCGGCTCATC +
Preference number: 4 (lower is better)
Translates to: APSYSHKSKLPCSSTEARWEGCV*LFIRLI
Trigger: GATGAGCCGGATGAAGAGTCACACACACCCCTCCCA...TCTTGCCTCTGTGGAAGAGCATGGCAATTTAGATTTGTGAGAATATGAGGGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR TCA 90 bp CTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTCATTGGGAGGGGTGTGTGTaGCTCTTCATCCGGCTCATC +
Preference number: 4 (lower is better)
Translates to: LSFQNNSELPVNLRGAFHWEGCV*LFIRLI
Trigger: GATGAGCCGGATGAAGAGTCACACACACCCCTCCCA...ATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp GGCAGGCTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGCTTCTATTCTCTTCATaGAGCCCTCCACCACAATGC +
Preference number: 4 (lower is better)
Translates to: GRLSFQNNSELPVNLRGALLFSS*SPPPQC
Trigger: GCATTGTGGTGGAGGGCTTCATGAAGAGAATAGAAG...CGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAGCCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp AGCAGAAACTCAACTTGTTATAAAAACTCAGAATGGCTCAGCAGGGGGATCTTGTGCAGCAGCTTCCCCTaGGCAGTCAGAGTGCCCTCA +
Preference number: 4 (lower is better)
Translates to: SRNSTCYKNSEWLSRGILCSSFP*AVRVPS
Trigger: TGAGGGCACTCTGACTGCTCAGGGGAAGCTGCTGCA...CAAGATCCCCCTGCTGAGCCATTCTGAGTTTTTATAACAAGTTGAGTTTCTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR TCA 90 bp GGCAGGCTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTCTAAGACTTGATTaGTGTCCTGCACCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: GRLSFQNNSELPVNLRGAFLRLD*CPAPRP
Trigger: AGGCCTGGGTGCAGGACATCAATCAAGTCTTAGAAA...CGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAGCCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp GGCAGGCTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGCTCCTTTCTTTCCGTTaGTACTCAATGGGCGATTGC +
Preference number: 4 (lower is better)
Translates to: GRLSFQNNSELPVNLRGALLSFR*YSMGDC
Trigger: GCAATCGCCCATTGAGTATCAACGGAAAGAAAGGAG...CGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAGCCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp CTGACGAGGTTTAAGAGGTACATCTCTCAATTCAGAGAACTGCACGGAGTGAAAGGAAGCCTGGCAGGTTaGGACCTCATCACAGCTGTG +
Preference number: 4 (lower is better)
Translates to: LTRFKRYISQFRELHGVKGSLAG*DLITAV
Trigger: CACAGCTGTGATGAGGTCTCAACCTGCCAGGCTTCC...TTTCACTCCGTGCAGTTCTCTGAATTGAGAGATGTACCTCTTAAACCTCGTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp CTGACGAGGTTTAAGAGGTACATCTCTCAATTCAGAGAACTGCACGGAGTGAAAACATGTTCTGCTGGTTaGCGGCGAGGACCTGGACCA +
Preference number: 4 (lower is better)
Translates to: LTRFKRYISQFRELHGVKTCSAG*RRGPGP
Trigger: TGGTCCAGGTCCTCGCCGTCAACCAGCAGAACATGT...TTTCACTCCGTGCAGTTCTCTGAATTGAGAGATGTACCTCTTAAACCTCGTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp GGCAGGCTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGACTGCAGAGCCTCCATaGTGTCTCGGATATAGAAAG +
Preference number: 4 (lower is better)
Translates to: GRLSFQNNSELPVNLRGATAEPP*CLGYRK
Trigger: CTTTCTATATCCGAGACATCATGGAGGCTCTGCAGT...CGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAGCCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp TCAGGTATTGATGGAAACTCATATGATGGCCATCCCTGGGCCAACAAATTAGCTGAGACGGGGATGCCTTaGATGACTTCTGGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: SGIDGNSYDGHPWANKLAETGMP*MTSGAA
Trigger: TGCTGCCCCAGAAGTCATTCAAGGCATCCCCGTCTC...AGCTAATTTGTTGGCCCAGGGATGGCCATCATATGAGTTTCCATCAATACCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR TCA 90 bp CTGACGAGGTTTAAGAGGTACATCTCTCAATTCAGAGAACTGCACGGAGTGAAAGAGACGGGGATGCCTTaGATGACTTCTGGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: LTRFKRYISQFRELHGVKETGMP*MTSGAA
Trigger: TGCTGCCCCAGAAGTCATTCAAGGCATCCCCGTCTC...TTTCACTCCGTGCAGTTCTCTGAATTGAGAGATGTACCTCTTAAACCTCGTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp TCAGGTCATCCACAGTGGACAGAACAGAACTTGCCAAGCTGGACTTTATGGATACACTGCACGTCTATGTaGAACCATAGGGGCTGGGAG +
Preference number: 4 (lower is better)
Translates to: SGHPQWTEQNLPSWTLWIHCTSM*NHRGWE
Trigger: CTCCCAGCCCCTATGGTTTCACATAGACGTGCAGTG...TATCCATAAAGTCCAGCTTGGCAAGTTCTGTTCTGTCCACTGTGGATGACCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR TCA 90 bp GGCAGGCTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGCCCCTTGATTTAGGGTaGCTTTTACTGCTGCTCAGA +
Preference number: 4 (lower is better)
Translates to: GRLSFQNNSELPVNLRGAPLDLG*LLLLLR
Trigger: TCTGAGCAGCAGTAAAAGTCACCCTAAATCAAGGGG...CGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAGCCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp GGCAGGCTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGAGCTGGGTGGAGATCTaGTTGATTTGTTGTGAGGCA +
Preference number: 4 (lower is better)
Translates to: GRLSFQNNSELPVNLRGASWVEI*LICCEA
Trigger: TGCCTCACAACAAATCAAGCAGATCTCCACCCAGCT...CGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAGCCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp CTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTCATACATGGCGAGGATGGTaGTGCGTTCATCCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: LSFQNNSELPVNLRGAFHTWRGW*CVHPGQ
Trigger: CTGCCCTGGATGAACGCAGCACCATCCTCGCCATGT...ATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp CTGACGAGGTTTAAGAGGTACATCTCTCAATTCAGAGAACTGCACGGAGTGAAATCATCATGCCTCTTCTaGAGGGCCCGGGCTCGATGT +
Preference number: 4 (lower is better)
Translates to: LTRFKRYISQFRELHGVKSSCLF*RARARC
Trigger: ACATCGAGCCCGGGCCCTGCAGAAGAGGCATGATGA...TTTCACTCCGTGCAGTTCTCTGAATTGAGAGATGTACCTCTTAAACCTCGTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp GCCAGTGTTTGGGAAAGGCTAAAGTTAACCCTCATCTTCTCTACCACACATCATCTCCAGGTGTCGAGCTaGCTTGTAGATCTCCTCGGG +
Preference number: 4 (lower is better)
Translates to: ASVWERLKLTLIFSTTHHLQVSS*LVDLLG
Trigger: CCCGAGGAGATCTACAAGGCAGCTCGACACCTGGAG...ATGATGTGTGGTAGAGAAGATGAGGGTTAACTTTAGCCTTTCCCAAACACTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp CTGACGAGGTTTAAGAGGTACATCTCTCAATTCAGAGAACTGCACGGAGTGAAAGGCGCTGACCTGAGCTaGTGGATAAGGTCTTCGCCT +
Preference number: 4 (lower is better)
Translates to: LTRFKRYISQFRELHGVKGADLS*WIRSSP
Trigger: AGGCGAAGACCTTATCCAGCAGCTCAGGTCAGCGCC...TTTCACTCCGTGCAGTTCTCTGAATTGAGAGATGTACCTCTTAAACCTCGTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp TGGAGAGAAGCTCAGCAACCTCGAATTGCACCCAGTAGAGAAGAAGGGAGCCCCCTTATGAGTCTGCTCTaGATTGAGCTCCAATTCATG +
Preference number: 4 (lower is better)
Translates to: WREAQQPRIAPSREEGSPLMSLL*IELQFM
Trigger: CATGAATTGGAGCTCAATGCAGAGCAGACTCATAAG...GGGGCTCCCTTCTTCTCTACTGGGTGCAATTCGAGGTTGCTGAGCTTCTCTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp GCCAGTGTTTGGGAAAGGCTAAAGTTAACCCTCATCTTCTCTACCACACATCATAGCACCTCGGCTTTCTaGTGTACCTGCAGGGCACTC +
Preference number: 4 (lower is better)
Translates to: ASVWERLKLTLIFSTTHHSTSAF*CTCRAL
Trigger: GAGTGCCCTGCAGGTACAGCAGAAAGCCGAGGTGCT...ATGATGTGTGGTAGAGAAGATGAGGGTTAACTTTAGCCTTTCCCAAACACTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp CTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTCATAGCACCTCGGCTTTCTaGTGTACCTGCAGGGCACTC +
Preference number: 4 (lower is better)
Translates to: LSFQNNSELPVNLRGAFHSTSAF*CTCRAL
Trigger: GAGTGCCCTGCAGGTACAGCAGAAAGCCGAGGTGCT...ATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp TACAAAGACAGTCCTTTCCTGAGCCAGGTGCAATTCCAGAGAATGACACTTTGCATGGTCGATCTCTGCTaGTGGCCCCAGCTTATCTCG +
Preference number: 4 (lower is better)
Translates to: YKDSPFLSQVQFQRMTLCMVDLC*WPQLIS
Trigger: CGAGATAAGCTGGGGCCAGCAGCAGAGATCGACCAT...GCAAAGTGTCATTCTCTGGAATTGCACCTGGCTCAGGAAAGGACTGTCTTTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp CCCCATAACCCAGCCAGGGAAATAAGCCCAACTTCAGGACCTCTCAGAAATCAGTCGAACACCACATATTaGTGGCATTGGTCTAACCGC +
Preference number: 4 (lower is better)
Translates to: PHNPAREISPTSGPLRNQSNTTY*WHWSNR
Trigger: GCGGTTAGACCAATGCCAGCAATATGTGGTGTTCGA...CTGATTTCTGAGAGGTCCTGAAGTTGGGCTTATTTCCCTGGCTGGGTTATGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp CCCCATAACCCAGCCAGGGAAATAAGCCCAACTTCAGGACCTCTCAGAAATCAGACCTTCTCCTTTGTTTaGTTGGCAGGCACCCTGAAT +
Preference number: 4 (lower is better)
Translates to: PHNPAREISPTSGPLRNQTFSFV*LAGTLN
Trigger: ATTCAGGGTGCCTGCCAAGCAAACAAAGGAGAAGGT...CTGATTTCTGAGAGGTCCTGAAGTTGGGCTTATTTCCCTGGCTGGGTTATGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp GGCAGGCTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGACCTTCTCCTTTGTTTaGTTGGCAGGCACCCTGAAT +
Preference number: 4 (lower is better)
Translates to: GRLSFQNNSELPVNLRGATFSFV*LAGTLN
Trigger: ATTCAGGGTGCCTGCCAAGCAAACAAAGGAGAAGGT...CGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAGCCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp AAACTCTGTGTTTGGGGTTGGGGCTCTCTCTTGAGTGTGTTGGAAACTGGAGGACCGATCCGAAAGGCTTaGTGGGATAATATCCAGCTC +
Preference number: 4 (lower is better)
Translates to: KLCVWGWGSLLSVLETGGPIRKA*WDNIQL
Trigger: GAGCTGGATATTATCCCAGCAAGCCTTTCGGATCGG...TCCTCCAGTTTCCAACACACTCAAGAGAGAGCCCCAACCCCAAACACAGAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp AAACTCTGTGTTTGGGGTTGGGGCTCTCTCTTGAGTGTGTTGGAAACTGGAGGAGAGTTGGCCAGACCATaGCGCTGTTGTATCTCATCA +
Preference number: 4 (lower is better)
Translates to: KLCVWGWGSLLSVLETGGELARP*RCCISS
Trigger: TGATGAGATACAACAGCGGCATGGTCTGGCCAACTC...TCCTCCAGTTTCCAACACACTCAAGAGAGAGCCCCAACCCCAAACACAGAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp GCCAGTGTTTGGGAAAGGCTAAAGTTAACCCTCATCTTCTCTACCACACATCATGCTAACCCGGTGAGCTaGAGGGACAAGTCCCAGGAT +
Preference number: 4 (lower is better)
Translates to: ASVWERLKLTLIFSTTHHANPVS*RDKSQD
Trigger: ATCCTGGGACTTGTCCCTGCAGCTCACCGGGTTAGC...ATGATGTGTGGTAGAGAAGATGAGGGTTAACTTTAGCCTTTCCCAAACACTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp CATTTTAGACTTTGGAGAGAAGCTCAGCAACCTCGAATTGCACCCAGTAGAGAAGAGCCTGGGCGTACCTaGTGTTCTGAGTGGGATCTG +
Preference number: 4 (lower is better)
Translates to: HFRLWREAQQPRIAPSREEPGRT*CSEWDL
Trigger: CAGATCCCACTCAGAACAGCAGGTACGCCCAGGCTC...TTCTCTACTGGGTGCAATTCGAGGTTGCTGAGCTTCTCTCCAAAGTCTAAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp CTGACGAGGTTTAAGAGGTACATCTCTCAATTCAGAGAACTGCACGGAGTGAAACCACGGACTCGGACTTaGCTCCATTCTCGCTTGAGG +
Preference number: 4 (lower is better)
Translates to: LTRFKRYISQFRELHGVKPRTRT*LHSRLR
Trigger: CCTCAAGCGAGAATGGAGGCAAGTCCGAGTCCGTGG...TTTCACTCCGTGCAGTTCTCTGAATTGAGAGATGTACCTCTTAAACCTCGTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp ATGTGCGATGGTCCCTATGGGGAAACCTGTCCACTTATGAATAAGGCCCTTTGTGTGCCCTCAAAGCCCTaGAGACGTCCTAGATTCATC +
Preference number: 4 (lower is better)
Translates to: MCDGPYGETCPLMNKALCVPSKP*RRPRFI
Trigger: GATGAATCTAGGACGTCTGCAGGGCTTTGAGGGCAC...ACAAAGGGCCTTATTCATAAGTGGACAGGTTTCCCCATAGGGACCATCGCACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR GCA 90 bp TCAGGTATTGATGGAAACTCATATGATGGCCATCCCTGGGCCAACAAATTAGCTTGGTCCGGGACTGCATaGCTGCATCCAGCTCGATCA +
Preference number: 4 (lower is better)
Translates to: SGIDGNSYDGHPWANKLAWSGTA*LHPARS
Trigger: TGATCGAGCTGGATGCAGGCATGCAGTCCCGGACCA...AGCTAATTTGTTGGCCCAGGGATGGCCATCATATGAGTTTCCATCAATACCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR GCA 90 bp GCTCCCTCATATTCTCACAAATCTAAATTGCCATGCTCTTCCACAGAGGCAAGATGGACGAGGTCCCATTaGAGCCTCCCAGGTCGTTCT +
Preference number: 4 (lower is better)
Translates to: APSYSHKSKLPCSSTEARWTRSH*SLPGRS
Trigger: AGAACGACCTGGGAGGCTGCAATGGGACCTCGTCCA...TCTTGCCTCTGTGGAAGAGCATGGCAATTTAGATTTGTGAGAATATGAGGGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR GCA 90 bp TCAGGTCATCCACAGTGGACAGAACAGAACTTGCCAAGCTGGACTTTATGGATAACCAGACACATGTTCTaGTGGTTGACGGCGAGGACC +
Preference number: 4 (lower is better)
Translates to: SGHPQWTEQNLPSWTLWITRHMF*WLTART
Trigger: GGTCCTCGCCGTCAACCAGCAGAACATGTGTCTGGT...TATCCATAAAGTCCAGCTTGGCAAGTTCTGTTCTGTCCACTGTGGATGACCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR GCA 90 bp ATGTGCGATGGTCCCTATGGGGAAACCTGTCCACTTATGAATAAGGCCCTTTGTCCGCCCGCTTTCTCATaGGTAGAGTATGCCATGAAC +
Preference number: 4 (lower is better)
Translates to: MCDGPYGETCPLMNKALCPPAFS*VEYAMN
Trigger: GTTCATGGCATACTCTACGCATGAGAAAGCGGGCGG...ACAAAGGGCCTTATTCATAAGTGGACAGGTTTCCCCATAGGGACCATCGCACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR GCA 90 bp CTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTCATGGGGCGGTTAGGGGCTaGTGGAACACCTTGCACTTT +
Preference number: 4 (lower is better)
Translates to: LSFQNNSELPVNLRGAFHGAVRG*WNTLHF
Trigger: AAAGTGCAAGGTGTTCCAGCAGCCCCTAACCGCCCC...ATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp TCAGGTCATCCACAGTGGACAGAACAGAACTTGCCAAGCTGGACTTTATGGATATGCAGCCATGGATGCTaGAAGCATGTGGCTGCTGTG +
Preference number: 4 (lower is better)
Translates to: SGHPQWTEQNLPSWTLWICSHGC*KHVAAV
Trigger: CACAGCAGCCACATGCTTGCAGCATCCATGGCTGCA...TATCCATAAAGTCCAGCTTGGCAAGTTCTGTTCTGTCCACTGTGGATGACCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR GCA 90 bp CTGACGAGGTTTAAGAGGTACATCTCTCAATTCAGAGAACTGCACGGAGTGAAAGGCTGCAGCCATGGATaGTGCAAGCATGTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: LTRFKRYISQFRELHGVKGCSHG*CKHVAA
Trigger: AGCAGCCACATGCTTGCAGCATCCATGGCTGCAGCC...TTTCACTCCGTGCAGTTCTCTGAATTGAGAGATGTACCTCTTAAACCTCGTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp GGCAGGCTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGAGAACTATCAGCGGCTaGATGGTGACAGGTATTGCA +
Preference number: 4 (lower is better)
Translates to: GRLSFQNNSELPVNLRGARTISG*MVTGIA
Trigger: TGCAATACCTGTCACCATGCAGCCGCTGATAGTTCT...CGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAGCCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp GTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACCAGGCCTTAGATGCACAGGGCGCTaGTGGGGACCAGACCCTCCA +
Preference number: 4 (lower is better)
Translates to: VMYQVLFHGFKKDLEPGLRCTGR*WGPDPP
Trigger: TGGAGGGTCTGGTCCCCAGCAGCGCCCTGTGCATCT...AAGGCCTGGTTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp CATTTTAGACTTTGGAGAGAAGCTCAGCAACCTCGAATTGCACCCAGTAGAGAAAACTCCTCCGTCAGCTaGGAGGGGTCCACCAGCTTT +
Preference number: 4 (lower is better)
Translates to: HFRLWREAQQPRIAPSRENSSVS*EGSTSF
Trigger: AAAGCTGGTGGACCCCTCCCAGCTGACGGAGGAGTT...TTCTCTACTGGGTGCAATTCGAGGTTGCTGAGCTTCTCTCCAAAGTCTAAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp GCCAGTGTTTGGGAAAGGCTAAAGTTAACCCTCATCTTCTCTACCACACATCATAACTCCTCCGTCAGCTaGGAGGGGTCCACCAGCTTT +
Preference number: 4 (lower is better)
Translates to: ASVWERLKLTLIFSTTHHNSSVS*EGSTSF
Trigger: AAAGCTGGTGGACCCCTCCCAGCTGACGGAGGAGTT...ATGATGTGTGGTAGAGAAGATGAGGGTTAACTTTAGCCTTTCCCAAACACTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp TATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAACGGGCTAGCATCTCCTaGAGGTCCTCGAGGCGCGAG +
Preference number: 4 (lower is better)
Translates to: YLQSHSVLLWFTLHVYVKRASIS*RSSRRE
Trigger: CTCGCGCCTCGAGGACCTCCAGGAGATGCTAGCCCG...TTTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp GGCAGGCTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGATCTCCGTGTGGCTCTaGAGGAATAACTCCTTGTTG +
Preference number: 4 (lower is better)
Translates to: GRLSFQNNSELPVNLRGAISVWL*RNNSLL
Trigger: CAACAAGGAGTTATTCCTCCAGAGCCACACGGAGAT...CGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAGCCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp CATTTTAGACTTTGGAGAGAAGCTCAGCAACCTCGAATTGCACCCAGTAGAGAACAGACATGGCGAGGATaGTGCTGCGTTCATCCAGGG +
Preference number: 4 (lower is better)
Translates to: HFRLWREAQQPRIAPSREQTWRG*CCVHPG
Trigger: CCCTGGATGAACGCAGCACCATCCTCGCCATGTCTG...TTCTCTACTGGGTGCAATTCGAGGTTGCTGAGCTTCTCTCCAAAGTCTAAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp CATTTTAGACTTTGGAGAGAAGCTCAGCAACCTCGAATTGCACCCAGTAGAGAACTGCGCACGAAGTCTTaGATGCGCACCTCCAGGTGT +
Preference number: 4 (lower is better)
Translates to: HFRLWREAQQPRIAPSRELRTKS*MRTSRC
Trigger: ACACCTGGAGGTGCGCATCCAAGACTTCGTGCGCAG...TTCTCTACTGGGTGCAATTCGAGGTTGCTGAGCTTCTCTCCAAAGTCTAAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp CTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTCATCTGCGCACGAAGTCTTaGATGCGCACCTCCAGGTGT +
Preference number: 4 (lower is better)
Translates to: LSFQNNSELPVNLRGAFHLRTKS*MRTSRC
Trigger: ACACCTGGAGGTGCGCATCCAAGACTTCGTGCGCAG...ATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp CTGACGAGGTTTAAGAGGTACATCTCTCAATTCAGAGAACTGCACGGAGTGAAAAGCTTCCGTTCTGTGTaGCGCTGCAGCCGCTGTTCT +
Preference number: 4 (lower is better)
Translates to: LTRFKRYISQFRELHGVKSFRSV*RCSRCS
Trigger: AGAACAGCGGCTGCAGCGCCACACAGAACGGAAGCT...TTTCACTCCGTGCAGTTCTCTGAATTGAGAGATGTACCTCTTAAACCTCGTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp CTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTCATCAGCACATTCCCGGATaGCATCGGCATCGTAGTGGC +
Preference number: 4 (lower is better)
Translates to: LSFQNNSELPVNLRGAFHQHIPG*HRHRSG
Trigger: GCCACTACGATGCCGATGCCATCCGGGAATGTGCTG...ATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp TATACACCAGAAAGCAGCATTGGCCTCAAAGTACAATTAGTCCTTTTAGTTCAGTCGGGTCCCCGAGTGTaGCTGGCGACACTGGGCATG +
Preference number: 4 (lower is better)
Translates to: YTPESSIGLKVQLVLLVQSGPRV*LATLGM
Trigger: CATGCCCAGTGTCGCCAGCCACACTCGGGGACCCGA...CTGAACTAAAAGGACTAATTGTACTTTGAGGCCAATGCTGCTTTCTGGTGTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp GGCAGGCTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGAATTCACCTGTTTCTTaGATCCAGTCAAGCGCCTGC +
Preference number: 4 (lower is better)
Translates to: GRLSFQNNSELPVNLRGANSPVS*IQSSAC
Trigger: GCAGGCGCTTGACTGGATCCAAGAAACAGGTGAATT...CGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAGCCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp AAACTCTGTGTTTGGGGTTGGGGCTCTCTCTTGAGTGTGTTGGAAACTGGAGGACTGTGGTCTCTCCAGTaGAGGTATGTGTTGAGAGGT +
Preference number: 4 (lower is better)
Translates to: KLCVWGWGSLLSVLETGGLWSLQ*RYVLRG
Trigger: ACCTCTCAACACATACCTCCACTGGAGAGACCACAG...TCCTCCAGTTTCCAACACACTCAAGAGAGAGCCCCAACCCCAAACACAGAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp AAACTCTGTGTTTGGGGTTGGGGCTCTCTCTTGAGTGTGTTGGAAACTGGAGGATTAGGTAGGAAGAGATaGAGTTGGCCAGACCATGCC +
Preference number: 4 (lower is better)
Translates to: KLCVWGWGSLLSVLETGGLGRKR*SWPDHA
Trigger: GGCATGGTCTGGCCAACTCCATCTCTTCCTACCTAA...TCCTCCAGTTTCCAACACACTCAAGAGAGAGCCCCAACCCCAAACACAGAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp TGGAGAGAAGCTCAGCAACCTCGAATTGCACCCAGTAGAGAAGAAGGGAGCCCCGCTTGGTTTCAATGTTaGAGGCTTTCAGCACTGTTT +
Preference number: 4 (lower is better)
Translates to: WREAQQPRIAPSREEGSPAWFQC*RLSALF
Trigger: AAACAGTGCTGAAAGCCTCCAACATTGAAACCAAGC...GGGGCTCCCTTCTTCTCTACTGGGTGCAATTCGAGGTTGCTGAGCTTCTCTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp AAACTCTGTGTTTGGGGTTGGGGCTCTCTCTTGAGTGTGTTGGAAACTGGAGGAACCTGCTGTTCTGAGTaGGATCTGGGGGAAGTACAT +
Preference number: 4 (lower is better)
Translates to: KLCVWGWGSLLSVLETGGTCCSE*DLGEVH
Trigger: ATGTACTTCCCCCAGATCCCACTCAGAACAGCAGGT...TCCTCCAGTTTCCAACACACTCAAGAGAGAGCCCCAACCCCAAACACAGAGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp CTGACGAGGTTTAAGAGGTACATCTCTCAATTCAGAGAACTGCACGGAGTGAAAGCTGGATGTCAGCGTTaGCGGCTTGCAGAACAACCC +
Preference number: 4 (lower is better)
Translates to: LTRFKRYISQFRELHGVKAGCQR*RLAEQP
Trigger: GGGTTGTTCTGCAAGCCGCCAACGCTGACATCCAGC...TTTCACTCCGTGCAGTTCTCTGAATTGAGAGATGTACCTCTTAAACCTCGTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp CTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTCATGCTGGATGTCAGCGTTaGCGGCTTGCAGAACAACCC +
Preference number: 4 (lower is better)
Translates to: LSFQNNSELPVNLRGAFHAGCQR*RLAEQP
Trigger: GGGTTGTTCTGCAAGCCGCCAACGCTGACATCCAGC...ATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp CTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTCATCAGGGGAGGCAGAGGTaGGTTATAGCTGGAGCCCTT +
Preference number: 4 (lower is better)
Translates to: LSFQNNSELPVNLRGAFHQGRQR*VIAGAL
Trigger: AAGGGCTCCAGCTATAACCCACCTCTGCCTCCCCTG...ATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp GTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACCAGGCCTTCGGGGGAATGGTCGCTaGCAGGCTGGTACACCAGAC +
Preference number: 4 (lower is better)
Translates to: VMYQVLFHGFKKDLEPGLRGNGR*QAGTPD
Trigger: GTCTGGTGTACCAGCCTGCCAGCGACCATTCCCCCG...AAGGCCTGGTTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp TCTGTTAGGGTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAATCGGCGGCGGGGGAATaGTCGCTGGCAGGCTGGTAC +
Preference number: 4 (lower is better)
Translates to: SVRVMYQVLFHGFKKDLESAAGE*SLAGWY
Trigger: GTACCAGCCTGCCAGCGACCATTCCCCCGCCGCCGA...TTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCACCCTAACAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp GGCAGGCTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGGTTTACGAGGCCCTGTaGCTTCATTTTTACCCGTGT +
Preference number: 4 (lower is better)
Translates to: GRLSFQNNSELPVNLRGAVYEAL*LHFYPC
Trigger: ACACGGGTAAAAATGAAGCCACAGGGCCTCGTAAAC...CGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAGCCTGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp GGCAGGCTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGAGGAGACCGTGTATGTaGCTGAGCTGTTATCAGTGT +
Preference number: 4 (lower is better)
Translates to: GRLSFQNNSELPVNLRGARRPCM*LSCYQC
Trigger: ACACTGATAACAGCTCAGCCACATACACGGTCTCCT...CGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAGCCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp GGCAGGCTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTCAGGATGTAGGATGTaGGGGACTCATAGGTGTCAT +
Preference number: 4 (lower is better)
Translates to: GRLSFQNNSELPVNLRGASGCRM*GTHRCH
Trigger: ATGACACCTATGAGTCCCCCACATCCTACATCCTGA...CGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAGCCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp TATACACCAGAAAGCAGCATTGGCCTCAAAGTACAATTAGTCCTTTTAGTTCAGAACCAGGCCGCTCGCTaGGCCGCTCCAGCAGCTCTA +
Preference number: 4 (lower is better)
Translates to: YTPESSIGLKVQLVLLVQNQAAR*AAPAAL
Trigger: TAGAGCTGCTGGAGCGGCCCAGCGAGCGGCCTGGTT...CTGAACTAAAAGGACTAATTGTACTTTGAGGCCAATGCTGCTTTCTGGTGTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp CCCCATAACCCAGCCAGGGAAATAAGCCCAACTTCAGGACCTCTCAGAAATCAGTGCTCGTCTCAAAGATaGATTTGGAGCTGCCAAAGT +
Preference number: 4 (lower is better)
Translates to: PHNPAREISPTSGPLRNQCSSQR*IWSCQS
Trigger: ACTTTGGCAGCTCCAAATTCATCTTTGAGACGAGCA...CTGATTTCTGAGAGGTCCTGAAGTTGGGCTTATTTCCCTGGCTGGGTTATGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR TCA 90 bp GGCAGGCTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTCAGCACCTTTTTCTTaGGCTGTGTGTGTTCGTCAA +
Preference number: 4 (lower is better)
Translates to: GRLSFQNNSELPVNLRGASAPFS*AVCVRQ
Trigger: TTGACGAACACACACAGCTCAAGAAAAAGGTGCTGA...CGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAGCCTGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp TATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAAGATGCAGTTGCGTCCTaGGAAGCCGTCGCTGCAGCG +
Preference number: 4 (lower is better)
Translates to: YLQSHSVLLWFTLHVYVKDAVAS*EAVAAA
Trigger: CGCTGCAGCGACGGCTTCTCAGGACGCAACTGCATC...TTTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp GGCAGGCTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTAGGTCCTCTGTGTTaGAGTCATTCATCTGCCGAA +
Preference number: 4 (lower is better)
Translates to: GRLSFQNNSELPVNLRGALGPLC*SHSSAE
Trigger: TTCGGCAGATGAATGACTTCAACACAGAGGACCTAA...CGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAGCCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp CTGACGAGGTTTAAGAGGTACATCTCTCAATTCAGAGAACTGCACGGAGTGAAAGCTGGCGTTGAGCATTaGCTCTCCATTGCGGATCCA +
Preference number: 4 (lower is better)
Translates to: LTRFKRYISQFRELHGVKAGVEH*LSIADP
Trigger: TGGATCCGCAATGGAGAGTCAATGCTCAACGCCAGC...TTTCACTCCGTGCAGTTCTCTGAATTGAGAGATGTACCTCTTAAACCTCGTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp CTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTCATCGACACTGGGCATGCTaGCGTTGTTCCTGTGGATGT +
Preference number: 4 (lower is better)
Translates to: LSFQNNSELPVNLRGAFHRHWAC*RCSCGC
Trigger: ACATCCACAGGAACAACGTCAGCATGCCCAGTGTCG...ATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp CATTTTAGACTTTGGAGAGAAGCTCAGCAACCTCGAATTGCACCCAGTAGAGAACGACACTGGGCATGCTaGCGTTGTTCCTGTGGATGT +
Preference number: 4 (lower is better)
Translates to: HFRLWREAQQPRIAPSRERHWAC*RCSCGC
Trigger: ACATCCACAGGAACAACGTCAGCATGCCCAGTGTCG...TTCTCTACTGGGTGCAATTCGAGGTTGCTGAGCTTCTCTCCAAAGTCTAAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR TCA 90 bp CTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTCATTCCGCTTCTCTTCATTaGCTTCGTGGTTGGCGTCCC +
Preference number: 4 (lower is better)
Translates to: LSFQNNSELPVNLRGAFHSASLH*LRGWRP
Trigger: GGGACGCCAACCACGAAGTCAATGAAGAGAAGCGGA...ATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp CCCCATAACCCAGCCAGGGAAATAAGCCCAACTTCAGGACCTCTCAGAAATCAGCTTCTCGAATGTTCTTaGTCCACTCCTGCTTGGTTT +
Preference number: 4 (lower is better)
Translates to: PHNPAREISPTSGPLRNQLLECS*STPAWF
Trigger: AAACCAAGCAGGAGTGGATCAAGAACATTCGAGAAG...CTGATTTCTGAGAGGTCCTGAAGTTGGGCTTATTTCCCTGGCTGGGTTATGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR TCA 90 bp GGCAGGCTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGCTTCTCGAATGTTCTTaGTCCACTCCTGCTTGGTTT +
Preference number: 4 (lower is better)
Translates to: GRLSFQNNSELPVNLRGALLECS*STPAWF
Trigger: AAACCAAGCAGGAGTGGATCAAGAACATTCGAGAAG...CGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAGCCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp ATGTGCGATGGTCCCTATGGGGAAACCTGTCCACTTATGAATAAGGCCCTTTGTGCCTCCATTCTCGCTTaGGGAATGAGAGTATGCATC +
Preference number: 4 (lower is better)
Translates to: MCDGPYGETCPLMNKALCASILA*GMRVCI
Trigger: GATGCATACTCTCATTCCTCAAGCGAGAATGGAGGC...ACAAAGGGCCTTATTCATAAGTGGACAGGTTTCCCCATAGGGACCATCGCACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR TCA 90 bp GGCAGGCTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGCTCAGTGTCAGCCTCTaGTTTATCTCCTGTTTTACC +
Preference number: 4 (lower is better)
Translates to: GRLSFQNNSELPVNLRGALSVSL*FISCFT
Trigger: GGTAAAACAGGAGATAAATCAGAGGCTGACACTGAG...CGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAGCCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp GGCAGGCTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGATCTCAGGAAGTCCTTaGGGAGCAACTGGTATTTTG +
Preference number: 4 (lower is better)
Translates to: GRLSFQNNSELPVNLRGAISGSP*GATGIL
Trigger: CAAAATACCAGTTGCTCCTCAAGGACTTCCTGAGAT...CGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAGCCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp TTATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAACTGGACCCTTCCAAGTaGTGGTGGGCTTTGGCCGCC +
Preference number: 4 (lower is better)
Translates to: LFTVTFSLALVHTARLCELDPSK*WWALAA
Trigger: GGCGGCCAAAGCCCACCATCACTTGGAAGGGTCCAG...TTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp TCAGGTCATCCACAGTGGACAGAACAGAACTTGCCAAGCTGGACTTTATGGATAGACTGCTGCCAGATCTaGGAACCTTCCTCTCTGTAC +
Preference number: 4 (lower is better)
Translates to: SGHPQWTEQNLPSWTLWIDCCQI*EPSSLY
Trigger: GTACAGAGAGGAAGGTTCTCAGATCTGGCAGCAGTC...TATCCATAAAGTCCAGCTTGGCAAGTTCTGTTCTGTCCACTGTGGATGACCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR TCA 90 bp CCCAGGATCATCATCATCTGGGATTCCTTGTTATTTCCAACTTGCTGTGGAGAACAAGGTCGAAGCCACTaGCTGCTGCCAGATCTGAGA +
Preference number: 4 (lower is better)
Translates to: PRIIIIWDSLLFPTCCGEQGRSH*LLPDLR
Trigger: TCTCAGATCTGGCAGCAGTCAGTGGCTTCGACCTTG...TTCTCCACAGCAAGTTGGAAATAACAAGGAATCCCAGATGATGATGATCCTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR TCA 90 bp CTGACGAGGTTTAAGAGGTACATCTCTCAATTCAGAGAACTGCACGGAGTGAAACAAGGTCGAAGCCACTaGCTGCTGCCAGATCTGAGA +
Preference number: 4 (lower is better)
Translates to: LTRFKRYISQFRELHGVKQGRSH*LLPDLR
Trigger: TCTCAGATCTGGCAGCAGTCAGTGGCTTCGACCTTG...TTTCACTCCGTGCAGTTCTCTGAATTGAGAGATGTACCTCTTAAACCTCGTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp CTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTCATCAAGGTCGAAGCCACTaGCTGCTGCCAGATCTGAGA +
Preference number: 4 (lower is better)
Translates to: LSFQNNSELPVNLRGAFHQGRSH*LLPDLR
Trigger: TCTCAGATCTGGCAGCAGTCAGTGGCTTCGACCTTG...ATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp CTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTCATCGGGGATGCCTTGAATaGCTTCTGGGGCAGCAAACT +
Preference number: 4 (lower is better)
Translates to: LSFQNNSELPVNLRGAFHRGCLE*LLGQQT
Trigger: AGTTTGCTGCCCCAGAAGTCATTCAAGGCATCCCCG...ATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp CTGACGAGGTTTAAGAGGTACATCTCTCAATTCAGAGAACTGCACGGAGTGAAACACTGCACGTCTATGTaGAACCATAGGGGCTGGGAG +
Preference number: 4 (lower is better)
Translates to: LTRFKRYISQFRELHGVKHCTSM*NHRGWE
Trigger: CTCCCAGCCCCTATGGTTTCACATAGACGTGCAGTG...TTTCACTCCGTGCAGTTCTCTGAATTGAGAGATGTACCTCTTAAACCTCGTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp GTAAAAGCTGATATGAAAGCTTGGGGTCTGTCTAACATTCTGTCAACTGCCCCCCTGCTGCTCAGACCCTaGATAACCACTGACGAGGTT +
Preference number: 4 (lower is better)
Translates to: VKADMKAWGLSNILSTAPLLLRP*ITTDEV
Trigger: AACCTCGTCAGTGGTTATTCAGGGTCTGAGCAGCAG...GGGGGCAGTTGACAGAATGTTAGACAGACCCCAAGCTTTCATATCAGCTTTTAC
49% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR TCA 90 bp TATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAATGCTGTGGCCCGCACTaGAGTCCTGGAGGACCACTG +
Preference number: 4 (lower is better)
Translates to: YLQSHSVLLWFTLHVYVKCCGPH*SPGGPL
Trigger: CAGTGGTCCTCCAGGACTTCAGTGCGGGCCACAGCA...TTTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp TATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAATGCCCGGGATGCAGTTaGGTCCTGAGAAGCCGTCGC +
Preference number: 4 (lower is better)
Translates to: YLQSHSVLLWFTLHVYVKCPGCS*VLRSRR
Trigger: GCGACGGCTTCTCAGGACGCAACTGCATCCCGGGCA...TTTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp CTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTCATACTCCCGACAGGAACTaGTCAGCCTTCTGGTGGAAC +
Preference number: 4 (lower is better)
Translates to: LSFQNNSELPVNLRGAFHTPDRN*SAFWWN
Trigger: GTTCCACCAGAAGGCTGAGCAGTTCCTGTCGGGAGT...ATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp GCCAGTGTTTGGGAAAGGCTAAAGTTAACCCTCATCTTCTCTACCACACATCATGCCAGCTCTAGGTCTTaGATCTCGGATGGCAGACCA +
Preference number: 4 (lower is better)
Translates to: ASVWERLKLTLIFSTTHHASSRS*ISDGRP
Trigger: TGGTCTGCCATCCGAGATGCAAGACCTAGAGCTGGC...ATGATGTGTGGTAGAGAAGATGAGGGTTAACTTTAGCCTTTCCCAAACACTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp TATACACCAGAAAGCAGCATTGGCCTCAAAGTACAATTAGTCCTTTTAGTTCAGAGCCGCACCTTGCGGTaGTGCCAGATGCTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: YTPESSIGLKVQLVLLVQSRTLR*CQMLSS
Trigger: GCTGGAGAGCATCTGGCAGCACCGCAAGGTGCGGCT...CTGAACTAAAAGGACTAATTGTACTTTGAGGCCAATGCTGCTTTCTGGTGTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp TATACACCAGAAAGCAGCATTGGCCTCAAAGTACAATTAGTCCTTTTAGTTCAGGGTGGAGCCGCACCTTaGGGTGCTGCCAGATGCTCT +
Preference number: 4 (lower is better)
Translates to: YTPESSIGLKVQLVLLVQGGAAP*GAARCS
Trigger: AGAGCATCTGGCAGCACCGCAAGGTGCGGCTCCACC...CTGAACTAAAAGGACTAATTGTACTTTGAGGCCAATGCTGCTTTCTGGTGTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp CATTTTAGACTTTGGAGAGAAGCTCAGCAACCTCGAATTGCACCCAGTAGAGAAACCTGCTGTACATCCTaGTGGAAGACGCAGAGCTGC +
Preference number: 4 (lower is better)
Translates to: HFRLWREAQQPRIAPSRETCCTS*WKTQSC
Trigger: GCAGCTCTGCGTCTTCCAGCAGGATGTACAGCAGGT...TTCTCTACTGGGTGCAATTCGAGGTTGCTGAGCTTCTCTCCAAAGTCTAAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp ACAGATAAAGAAACCGAAGCTCACACAAGACCACAAAGCAAGATTTTGCTGAGTTCCGCTGCTCCACCCTaGGCACGAAGTCTTGGATGC +
Preference number: 4 (lower is better)
Translates to: TDKETEAHTRPQSKILLSSAAPP*ARSLGC
Trigger: GCATCCAAGACTTCGTGCGCAGGGTGGAGCAGCGGA...ACTCAGCAAAATCTTGCTTTGTGGTCTTGTGTGAGCTTCGGTTTCTTTATCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439170.2
CDS-3UTR GCA 90 bp ACAGATAAAGAAACCGAAGCTCACACAAGACCACAAAGCAAGATTTTGCTGAGTAGGAGAAGCTTCCGCTaGTCCACCCTGCGCACGAAG +
Preference number: 4 (lower is better)
Translates to: TDKETEAHTRPQSKILLSRRSFR*STLRTK
Trigger: CTTCGTGCGCAGGGTGGAGCAGCGGAAGCTTCTCCT...ACTCAGCAAAATCTTGCTTTGTGGTCTTGTGTGAGCTTCGGTTTCTTTATCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439170.2
CDS-3UTR GCA 90 bp AAACTCTGTGTTTGGGGTTGGGGCTCTCTCTTGAGTGTGTTGGAAACTGGAGGAGATCAGTTCCTGGACTaGATCCACAGAATCTGCACA +
Preference number: 4 (lower is better)
Translates to: KLCVWGWGSLLSVLETGGDQFLD*IHRICT
Trigger: TGTGCAGATTCTGTGGATGCAGTCCAGGAACTGATC...TCCTCCAGTTTCCAACACACTCAAGAGAGAGCCCCAACCCCAAACACAGAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp CTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTCATGTGGCGGTCTGCTGCTaGTGGAACTGCTTGATCAGT +
Preference number: 4 (lower is better)
Translates to: LSFQNNSELPVNLRGAFHVAVCC*WNCLIS
Trigger: ACTGATCAAGCAGTTCCAGCAGCAGCAGACCGCCAC...ATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp GCCAGTGTTTGGGAAAGGCTAAAGTTAACCCTCATCTTCTCTACCACACATCATGCATCATCAAGCTGCTaGAGGACCGACTCGATGTGG +
Preference number: 4 (lower is better)
Translates to: ASVWERLKLTLIFSTTHHASSSC*RTDSMW
Trigger: CCACATCGAGTCGGTCCTGCAGCAGCTTGATGATGC...ATGATGTGTGGTAGAGAAGATGAGGGTTAACTTTAGCCTTTCCCAAACACTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp GGCAGGCTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGAATTCCAATAACTCTTaGACCTGGGCTGCCAGATCA +
Preference number: 4 (lower is better)
Translates to: GRLSFQNNSELPVNLRGANSNNS*TWAARS
Trigger: TGATCTGGCAGCCCAGGTGCAAGAGTTATTGGAATT...CGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAGCCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp CTGACGAGGTTTAAGAGGTACATCTCTCAATTCAGAGAACTGCACGGAGTGAAATGCAGGGCACTCTGGTaGGTCTTCTGCAAGGAAGTG +
Preference number: 4 (lower is better)
Translates to: LTRFKRYISQFRELHGVKCRALW*VFCKEV
Trigger: CACTTCCTTGCAGAAGACGCACCAGAGTGCCCTGCA...TTTCACTCCGTGCAGTTCTCTGAATTGAGAGATGTACCTCTTAAACCTCGTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360013.7
CDS-3UTR GCA 90 bp GCCAGTGTTTGGGAAAGGCTAAAGTTAACCCTCATCTTCTCTACCACACATCATGACATGGTCGATCTCTaGTGCTGGCCCCAGCTTATC +
Preference number: 4 (lower is better)
Translates to: ASVWERLKLTLIFSTTHHDMVDL*CWPQLI
Trigger: GATAAGCTGGGGCCAGCAGCAGAGATCGACCATGTC...ATGATGTGTGGTAGAGAAGATGAGGGTTAACTTTAGCCTTTCCCAAACACTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp CATTTTAGACTTTGGAGAGAAGCTCAGCAACCTCGAATTGCACCCAGTAGAGAAATGGCTTTCACTTGTTaGTCGGGTCCCCGAGTGTGG +
Preference number: 4 (lower is better)
Translates to: HFRLWREAQQPRIAPSREMAFTC*SGPRVW
Trigger: CCACACTCGGGGACCCGAGCAACAAGTGAAAGCCAT...TTCTCTACTGGGTGCAATTCGAGGTTGCTGAGCTTCTCTCCAAAGTCTAAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp TTATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAGGATCGCCCTCCACGTaGTCGGTCACACCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: LFTVTFSLALVHTARLCEGSPST*SVTPSS
Trigger: AGAGCTGGGTGTGACCGAGCACGTGGAGGGCGATCC...TTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp TACAAAGACAGTCCTTTCCTGAGCCAGGTGCAATTCCAGAGAATGACACTTTGCCCTCTTCACTCATGTTaGAGACCTCTAGGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: YKDSPFLSQVQFQRMTLCPLHSC*RPLGQQ
Trigger: CTGCTGCCCTAGAGGTCTGCAACATGAGTGAAGAGG...GCAAAGTGTCATTCTCTGGAATTGCACCTGGCTCAGGAAAGGACTGTCTTTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp CTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTCATCCGGGACTGCATGCCTaGATCCAGCTCGATCACATA +
Preference number: 4 (lower is better)
Translates to: LSFQNNSELPVNLRGAFHPGLHA*IQLDHI
Trigger: TATGTGATCGAGCTGGATGCAGGCATGCAGTCCCGG...ATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp ATTCAGGTCATCCACAGTGGACAGAACAGAACTTGCCAAGCTGGACTTTATGGATCAGCGTTGGCGGCTTaGAGAACAACCCTCTCAGAA +
Preference number: 4 (lower is better)
Translates to: IQVIHSGQNRTCQAGLYGSALAA*RTTLSE
Trigger: TTCTGAGAGGGTTGTTCTGCAAGCCGCCAACGCTGA...TCCATAAAGTCCAGCTTGGCAAGTTCTGTTCTGTCCACTGTGGATGACCTGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR GCA 90 bp TTATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAATCCTGCACCCAGGCCTaGTGGATGTCAGCGTTGGCG +
Preference number: 4 (lower is better)
Translates to: LFTVTFSLALVHTARLCESCTQA*WMSALA
Trigger: CGCCAACGCTGACATCCAGCAGGCCTGGGTGCAGGA...TTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp GGCAGGCTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGACCTCATCACAGCTGTaGTCCTTTCTTTCCGTTGAT +
Preference number: 4 (lower is better)
Translates to: GRLSFQNNSELPVNLRGATSSQL*SFLSVD
Trigger: ATCAACGGAAAGAAAGGAGCACAGCTGTGATGAGGT...CGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAGCCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp GGCAGGCTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGCCCGTGGTCATTTGTTaGTATGCAGGTATAAATCCC +
Preference number: 4 (lower is better)
Translates to: GRLSFQNNSELPVNLRGAPVVIC*YAGINP
Trigger: GGGATTTATACCTGCATAGCAACAAATGACCACGGG...CGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAGCCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp CTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTCATGGAGAATCACGGAGGTaGAGCTTCTCTCCTGGGCAA +
Preference number: 4 (lower is better)
Translates to: LSFQNNSELPVNLRGAFHGESRR*SFSPGQ
Trigger: TTGCCCAGGAGAGAAGCTGCACCTCCGTGATTCTCC...ATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp CTGACGAGGTTTAAGAGGTACATCTCTCAATTCAGAGAACTGCACGGAGTGAAAGGAGAATCACGGAGGTaGAGCTTCTCTCCTGGGCAA +
Preference number: 4 (lower is better)
Translates to: LTRFKRYISQFRELHGVKGESRR*SFSPGQ
Trigger: TTGCCCAGGAGAGAAGCTGCACCTCCGTGATTCTCC...TTTCACTCCGTGCAGTTCTCTGAATTGAGAGATGTACCTCTTAAACCTCGTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp GTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACCAGGCCTTCCACCTGCCGTGGTCTaGACACCATTGTTCTGGGCC +
Preference number: 4 (lower is better)
Translates to: VMYQVLFHGFKKDLEPGLPPAVV*TPLFWA
Trigger: GGCCCAGAACAATGGTGTGCAGACCACGGCAGGTGG...AAGGCCTGGTTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR GCA 90 bp GTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACCAGGCCTTAGCAGCTCTACCGTCTaGCCCACCTGGATGGTCAGC +
Preference number: 4 (lower is better)
Translates to: VMYQVLFHGFKKDLEPGLSSSTV*PTWMVS
Trigger: GCTGACCATCCAGGTGGGGCAGACGGTAGAGCTGCT...AAGGCCTGGTTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp TATACACCAGAAAGCAGCATTGGCCTCAAAGTACAATTAGTCCTTTTAGTTCAGAGATGCACAGGGCGCTaGTGGGGACCAGACCCTCCA +
Preference number: 4 (lower is better)
Translates to: YTPESSIGLKVQLVLLVQRCTGR*WGPDPP
Trigger: TGGAGGGTCTGGTCCCCAGCAGCGCCCTGTGCATCT...CTGAACTAAAAGGACTAATTGTACTTTGAGGCCAATGCTGCTTTCTGGTGTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp CTGACGAGGTTTAAGAGGTACATCTCTCAATTCAGAGAACTGCACGGAGTGAAAAGTCCATCTCCACGCTaGTTCGGGAGTGTGAGATGC +
Preference number: 4 (lower is better)
Translates to: LTRFKRYISQFRELHGVKSPSPR*FGSVRC
Trigger: GCATCTCACACTCCCGAAGCAGCGTGGAGATGGACT...TTTCACTCCGTGCAGTTCTCTGAATTGAGAGATGTACCTCTTAAACCTCGTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp CTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTCATAGTCCATCTCCACGCTaGTTCGGGAGTGTGAGATGC +
Preference number: 4 (lower is better)
Translates to: LSFQNNSELPVNLRGAFHSPSPR*FGSVRC
Trigger: GCATCTCACACTCCCGAAGCAGCGTGGAGATGGACT...ATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp CTGACGAGGTTTAAGAGGTACATCTCTCAATTCAGAGAACTGCACGGAGTGAAAGCACACGTCCTCACTTaGCACGCTGGCCAAATACGT +
Preference number: 4 (lower is better)
Translates to: LTRFKRYISQFRELHGVKAHVLT*HAGQIR
Trigger: ACGTATTTGGCCAGCGTGCCAAGTGAGGACGTGTGC...TTTCACTCCGTGCAGTTCTCTGAATTGAGAGATGTACCTCTTAAACCTCGTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp TACAAAGACAGTCCTTTCCTGAGCCAGGTGCAATTCCAGAGAATGACACTTTGCCACATGGATCTCAGCTaGAAAGGCTTCCTGCAGCGT +
Preference number: 4 (lower is better)
Translates to: YKDSPFLSQVQFQRMTLCHMDLS*KGFLQR
Trigger: ACGCTGCAGGAAGCCTTTCCAGCTGAGATCCATGTG...GCAAAGTGTCATTCTCTGGAATTGCACCTGGCTCAGGAAAGGACTGTCTTTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp TATACACCAGAAAGCAGCATTGGCCTCAAAGTACAATTAGTCCTTTTAGTTCAGTTGGGCACCAGGCTCTaGAAGTCAGCACTGCCCGGG +
Preference number: 4 (lower is better)
Translates to: YTPESSIGLKVQLVLLVQLGTRL*KSALPG
Trigger: CCCGGGCAGTGCTGACTTCCAGAGCCTGGTGCCCAA...CTGAACTAAAAGGACTAATTGTACTTTGAGGCCAATGCTGCTTTCTGGTGTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp TTATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAGCAGGTGCTGCCGGGTaGAGTGCAGCTTGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: LFTVTFSLALVHTARLCEAGAAG*SAACPG
Trigger: TCCTGGACAAGCTGCACTCCACCCGGCAGCACCTGC...TTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp TACAAAGACAGTCCTTTCCTGAGCCAGGTGCAATTCCAGAGAATGACACTTTGCACTCCGATCTCCGTGTaGCTCTGGAGGAATAACTCC +
Preference number: 4 (lower is better)
Translates to: YKDSPFLSQVQFQRMTLCTPISV*LWRNNS
Trigger: GGAGTTATTCCTCCAGAGCCACACGGAGATCGGAGT...GCAAAGTGTCATTCTCTGGAATTGCACCTGGCTCAGGAAAGGACTGTCTTTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp CTGACGAGGTTTAAGAGGTACATCTCTCAATTCAGAGAACTGCACGGAGTGAAAAAGCTCTTCCACTCCTaGTCCAGCTGGGTGGAGATC +
Preference number: 4 (lower is better)
Translates to: LTRFKRYISQFRELHGVKKLFHS*SSWVEI
Trigger: GATCTCCACCCAGCTGGACCAGGAGTGGAAGAGCTT...TTTCACTCCGTGCAGTTCTCTGAATTGAGAGATGTACCTCTTAAACCTCGTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp CATTTTAGACTTTGGAGAGAAGCTCAGCAACCTCGAATTGCACCCAGTAGAGAAGGAACACAGCAGACATaGCGAGGATGGTGCTGCGTT +
Preference number: 4 (lower is better)
Translates to: HFRLWREAQQPRIAPSREGTQQT*RGWCCV
Trigger: AACGCAGCACCATCCTCGCCATGTCTGCTGTGTTCC...TTCTCTACTGGGTGCAATTCGAGGTTGCTGAGCTTCTCTCCAAAGTCTAAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp CTGACGAGGTTTAAGAGGTACATCTCTCAATTCAGAGAACTGCACGGAGTGAAAGGAACACAGCAGACATaGCGAGGATGGTGCTGCGTT +
Preference number: 4 (lower is better)
Translates to: LTRFKRYISQFRELHGVKGTQQT*RGWCCV
Trigger: AACGCAGCACCATCCTCGCCATGTCTGCTGTGTTCC...TTTCACTCCGTGCAGTTCTCTGAATTGAGAGATGTACCTCTTAAACCTCGTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp CTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTCATTGCTCAGCCTTCTGGTaGAACACAGCAGACATGGCG +
Preference number: 4 (lower is better)
Translates to: LSFQNNSELPVNLRGAFHCSAFW*NTADMA
Trigger: CGCCATGTCTGCTGTGTTCCACCAGAAGGCTGAGCA...ATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp CATTTTAGACTTTGGAGAGAAGCTCAGCAACCTCGAATTGCACCCAGTAGAGAATGCTGTACATCCTGCTaGAAGACGCAGAGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: HFRLWREAQQPRIAPSRECCTSC*KTQSCS
Trigger: GCTGCAGCTCTGCGTCTTCCAGCAGGATGTACAGCA...TTCTCTACTGGGTGCAATTCGAGGTTGCTGAGCTTCTCTCCAAAGTCTAAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp CTGACGAGGTTTAAGAGGTACATCTCTCAATTCAGAGAACTGCACGGAGTGAAATGCTGTACATCCTGCTaGAAGACGCAGAGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: LTRFKRYISQFRELHGVKCCTSC*KTQSCS
Trigger: GCTGCAGCTCTGCGTCTTCCAGCAGGATGTACAGCA...TTTCACTCCGTGCAGTTCTCTGAATTGAGAGATGTACCTCTTAAACCTCGTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp GGCAGGCTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGAGAAAGGCCTCACCATaGTTTTCAATCCAGTCCAAC +
Preference number: 4 (lower is better)
Translates to: GRLSFQNNSELPVNLRGARKASP*FSIQSN
Trigger: GTTGGACTGGATTGAAAACCATGGTGAGGCCTTTCT...CGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAGCCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp CCCCATAACCCAGCCAGGGAAATAAGCCCAACTTCAGGACCTCTCAGAAATCAGAGAAAGGCCTCACCATaGTTTTCAATCCAGTCCAAC +
Preference number: 4 (lower is better)
Translates to: PHNPAREISPTSGPLRNQRKASP*FSIQSN
Trigger: GTTGGACTGGATTGAAAACCATGGTGAGGCCTTTCT...CTGATTTCTGAGAGGTCCTGAAGTTGGGCTTATTTCCCTGGCTGGGTTATGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp CTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTCATTCCTCCATCTGCACCTaGGCATCATCAAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: LSFQNNSELPVNLRGAFHSSICT*ASSSCC
Trigger: GCAGCAGCTTGATGATGCCCAGGTGCAGATGGAGGA...ATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp CTGACGAGGTTTAAGAGGTACATCTCTCAATTCAGAGAACTGCACGGAGTGAAATCCTCCATCTGCACCTaGGCATCATCAAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: LTRFKRYISQFRELHGVKSSICT*ASSSCC
Trigger: GCAGCAGCTTGATGATGCCCAGGTGCAGATGGAGGA...TTTCACTCCGTGCAGTTCTCTGAATTGAGAGATGTACCTCTTAAACCTCGTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp GGCAGGCTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGAGGTCATGTTGTTCATaGCTAGCTTCCGTTCTGTGT +
Preference number: 4 (lower is better)
Translates to: GRLSFQNNSELPVNLRGARSCCS*LASVLC
Trigger: ACACAGAACGGAAGCTAGCCATGAACAACATGACCT...CGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAGCCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp CTGACGAGGTTTAAGAGGTACATCTCTCAATTCAGAGAACTGCACGGAGTGAAAACCTCCGTGATGTACTaGTGCAGATCCTGTCCCTGC +
Preference number: 4 (lower is better)
Translates to: LTRFKRYISQFRELHGVKTSVMY*CRSCPC
Trigger: GCAGGGACAGGATCTGCACCAGTACATCACGGAGGT...TTTCACTCCGTGCAGTTCTCTGAATTGAGAGATGTACCTCTTAAACCTCGTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp CATTTTAGACTTTGGAGAGAAGCTCAGCAACCTCGAATTGCACCCAGTAGAGAAACCTCCGTGATGTACTaGTGCAGATCCTGTCCCTGC +
Preference number: 4 (lower is better)
Translates to: HFRLWREAQQPRIAPSRETSVMY*CRSCPC
Trigger: GCAGGGACAGGATCTGCACCAGTACATCACGGAGGT...TTCTCTACTGGGTGCAATTCGAGGTTGCTGAGCTTCTCTCCAAAGTCTAAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp CATTTTAGACTTTGGAGAGAAGCTCAGCAACCTCGAATTGCACCCAGTAGAGAAACCTGCAGGGCACTCTaGTGCGTCTTCTGCAAGGAA +
Preference number: 4 (lower is better)
Translates to: HFRLWREAQQPRIAPSRETCRAL*CVFCKE
Trigger: TTCCTTGCAGAAGACGCACCAGAGTGCCCTGCAGGT...TTCTCTACTGGGTGCAATTCGAGGTTGCTGAGCTTCTCTCCAAAGTCTAAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000240874.7
CDS-3UTR CCA 90 bp TACAAAGACAGTCCTTTCCTGAGCCAGGTGCAATTCCAGAGAATGACACTTTGCATGAGGGGAATGACATaGTCGATCTCTGCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: YKDSPFLSQVQFQRMTLCMRGMT*SISAAG
Trigger: GCCAGCAGCAGAGATCGACCATGTCATTCCCCTCAT...GCAAAGTGTCATTCTCTGGAATTGCACCTGGCTCAGGAAAGGACTGTCTTTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp AAACTCTGTGTTTGGGGTTGGGGCTCTCTCTTGAGTGTGTTGGAAACTGGAGGAACATATTGCTGGCATTaGTCTAACCGCCGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: KLCVWGWGSLLSVLETGGTYCWH*SNRRFF
Trigger: GAAGAAGCGGCGGTTAGACCAATGCCAGCAATATGT...TCCTCCAGTTTCCAACACACTCAAGAGAGAGCCCCAACCCCAAACACAGAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp GTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACCAGGCCTTGAGATGGTGTCTGGTTaGCTGCTCCCATCCCCCTGG +
Preference number: 4 (lower is better)
Translates to: VMYQVLFHGFKKDLEPGLEMVSG*LLPSPW
Trigger: CCAGGGGGATGGGAGCAGCCAACCAGACACCATCTC...AAGGCCTGGTTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp CAGCAATTCTCAGTCATGCAAATGCCCGTGTTAAAGTTCTCCATTGGATTTAAACCGAGGGTGAGCCCATaGCCCAGGCGGGGAGATTTT +
Preference number: 4 (lower is better)
Translates to: QQFSVMQMPVLKFSIGFKPRVSP*PRRGDF
Trigger: AAAATCTCCCCGCCTGGGCCATGGGCTCACCCTCGG...TTTAAATCCAATGGAGAACTTTAACACGGGCATTTGCATGACTGAGAATTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp TTATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAGGACCCGGGGAACTGTaGATGGAGTTCAGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: LFTVTFSLALVHTARLCEGPGEL*MEFREG
Trigger: GCCCTCCCTGAACTCCATCCACAGTTCCCCGGGTCC...TTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp GTAAAAGCTGATATGAAAGCTTGGGGTCTGTCTAACATTCTGTCAACTGCCCCCTTTCATCCCCAGGCTTaGGAGATCCCAGGTCAAAGC +
Preference number: 4 (lower is better)
Translates to: VKADMKAWGLSNILSTAPFHPQA*EIPGQS
Trigger: GCTTTGACCTGGGATCTCCCAAGCCTGGGGATGAAA...GGGGGCAGTTGACAGAATGTTAGACAGACCCCAAGCTTTCATATCAGCTTTTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR CCA 90 bp TATACACCAGAAAGCAGCATTGGCCTCAAAGTACAATTAGTCCTTTTAGTTCAGTGCACCCAGGCCTGCTaGATGTCAGCGTTGGCGGCT +
Preference number: 4 (lower is better)
Translates to: YTPESSIGLKVQLVLLVQCTQAC*MSALAA
Trigger: AGCCGCCAACGCTGACATCCAGCAGGCCTGGGTGCA...CTGAACTAAAAGGACTAATTGTACTTTGAGGCCAATGCTGCTTTCTGGTGTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp CTGACGAGGTTTAAGAGGTACATCTCTCAATTCAGAGAACTGCACGGAGTGAAATGGCTTGGGGAAGCCTaGCAGGTTGAGACCTCATCA +
Preference number: 4 (lower is better)
Translates to: LTRFKRYISQFRELHGVKWLGEA*QVETSS
Trigger: TGATGAGGTCTCAACCTGCCAGGCTTCCCCAAGCCA...TTTCACTCCGTGCAGTTCTCTGAATTGAGAGATGTACCTCTTAAACCTCGTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp CCCAGGATCATCATCATCTGGGATTCCTTGTTATTTCCAACTTGCTGTGGAGAAGAGGTGGGTTATAGCTaGAGCCCTTTGGGGGCTTCT +
Preference number: 4 (lower is better)
Translates to: PRIIIIWDSLLFPTCCGEEVGYS*SPLGAS
Trigger: AGAAGCCCCCAAAGGGCTCCAGCTATAACCCACCTC...TTCTCCACAGCAAGTTGGAAATAACAAGGAATCCCAGATGATGATGATCCTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR CCA 90 bp CTGACGAGGTTTAAGAGGTACATCTCTCAATTCAGAGAACTGCACGGAGTGAAAGAGGTGGGTTATAGCTaGAGCCCTTTGGGGGCTTCT +
Preference number: 4 (lower is better)
Translates to: LTRFKRYISQFRELHGVKEVGYS*SPLGAS
Trigger: AGAAGCCCCCAAAGGGCTCCAGCTATAACCCACCTC...TTTCACTCCGTGCAGTTCTCTGAATTGAGAGATGTACCTCTTAAACCTCGTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp AGCAGAAACTCAACTTGTTATAAAAACTCAGAATGGCTCAGCAGGGGGATCTTGCAGGGGAGGCAGAGGTaGGTTATAGCTGGAGCCCTT +
Preference number: 4 (lower is better)
Translates to: SRNSTCYKNSEWLSRGILQGRQR*VIAGAL
Trigger: AAGGGCTCCAGCTATAACCCACCTCTGCCTCCCCTG...CAAGATCCCCCTGCTGAGCCATTCTGAGTTTTTATAACAAGTTGAGTTTCTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR CCA 90 bp GTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACCAGGCCTTTTGACGGCGAGGACCTaGACCACCTCACCTTGGCTC +
Preference number: 4 (lower is better)
Translates to: VMYQVLFHGFKKDLEPGLLTART*TTSPWL
Trigger: GAGCCAAGGTGAGGTGGTCCAGGTCCTCGCCGTCAA...AAGGCCTGGTTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp CTGACGAGGTTTAAGAGGTACATCTCTCAATTCAGAGAACTGCACGGAGTGAAAAGACACATGTTCTGCTaGTTGACGGCGAGGACCTGG +
Preference number: 4 (lower is better)
Translates to: LTRFKRYISQFRELHGVKRHMFC*LTARTW
Trigger: CCAGGTCCTCGCCGTCAACCAGCAGAACATGTGTCT...TTTCACTCCGTGCAGTTCTCTGAATTGAGAGATGTACCTCTTAAACCTCGTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp CTGACGAGGTTTAAGAGGTACATCTCTCAATTCAGAGAACTGCACGGAGTGAAATGGTCGCTGGCAGGCTaGTACACCAGACACATGTTC +
Preference number: 4 (lower is better)
Translates to: LTRFKRYISQFRELHGVKWSLAG*YTRHMF
Trigger: GAACATGTGTCTGGTGTACCAGCCTGCCAGCGACCA...TTTCACTCCGTGCAGTTCTCTGAATTGAGAGATGTACCTCTTAAACCTCGTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp TCAGGTATTGATGGAAACTCATATGATGGCCATCCCTGGGCCAACAAATTAGCTAGTGATGGTGGGCTTTaGCCGCCCACAGACTTTGCA +
Preference number: 4 (lower is better)
Translates to: SGIDGNSYDGHPWANKLASDGGL*PPTDFA
Trigger: TGCAAAGTCTGTGGGCGGCCAAAGCCCACCATCACT...AGCTAATTTGTTGGCCCAGGGATGGCCATCATATGAGTTTCCATCAATACCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR CCA 90 bp CTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTCATAGTGATGGTGGGCTTTaGCCGCCCACAGACTTTGCA +
Preference number: 4 (lower is better)
Translates to: LSFQNNSELPVNLRGAFHSDGGL*PPTDFA
Trigger: TGCAAAGTCTGTGGGCGGCCAAAGCCCACCATCACT...ATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp CCCAGGATCATCATCATCTGGGATTCCTTGTTATTTCCAACTTGCTGTGGAGAAGCGGTTAGGGGCTGCTaGAACACCTTGCACTTTGAC +
Preference number: 4 (lower is better)
Translates to: PRIIIIWDSLLFPTCCGEAVRGC*NTLHFD
Trigger: GTCAAAGTGCAAGGTGTTCCAGCAGCCCCTAACCGC...TTCTCCACAGCAAGTTGGAAATAACAAGGAATCCCAGATGATGATGATCCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR CCA 90 bp CTGACGAGGTTTAAGAGGTACATCTCTCAATTCAGAGAACTGCACGGAGTGAAAATAGGGGCTGGGAGATaGCTACGTCCCTTGGTTCAC +
Preference number: 4 (lower is better)
Translates to: LTRFKRYISQFRELHGVKIGAGR*LRPLVH
Trigger: GTGAACCAAGGGACGTAGCCATCTCCCAGCCCCTAT...TTTCACTCCGTGCAGTTCTCTGAATTGAGAGATGTACCTCTTAAACCTCGTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp GGCAGGCTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGCTCCCATTTTACCAATaGGGACATTTGGGGAAGGAA +
Preference number: 4 (lower is better)
Translates to: GRLSFQNNSELPVNLRGALPFYQ*GHLGKE
Trigger: TTCCTTCCCCAAATGTCCCCATTGGTAAAATGGGAG...CGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAGCCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR CCA 90 bp GGCAGGCTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGGTAATGCCTAACTCGTaGGCTCTAATCATGGAGGTT +
Preference number: 4 (lower is better)
Translates to: GRLSFQNNSELPVNLRGAVMPNS*ALIMEV
Trigger: AACCTCCATGATTAGAGCCCACGAGTTAGGCATTAC...CGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAGCCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR TCA 90 bp TTATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAGGTGCACGGCGCTGTTaGAGAACTCCTCCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: LFTVTFSLALVHTARLCEGARRC*RTPPGR
Trigger: TCTCCCTGGAGGAGTTCTTCAACAGCGCCGTGCACC...TTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp CAGCAATTCTCAGTCATGCAAATGCCCGTGTTAAAGTTCTCCATTGGATTTAAAGGTGCACGGCGCTGTTaGAGAACTCCTCCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: QQFSVMQMPVLKFSIGFKGARRC*RTPPGR
Trigger: TCTCCCTGGAGGAGTTCTTCAACAGCGCCGTGCACC...TTTAAATCCAATGGAGAACTTTAACACGGGCATTTGCATGACTGAGAATTGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR TCA 90 bp TTATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAGTGTGTGTTCGTCAATaGGCCGCCGAGAGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: LFTVTFSLALVHTARLCEVCVRQ*AAESPP
Trigger: TGGAGGGCTCTCGGCGGCTCATTGACGAACACACAC...TTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp TATACACCAGAAAGCAGCATTGGCCTCAAAGTACAATTAGTCCTTTTAGTTCAGAGTTGGCTGTGGCCGTaGGGGATTCGGAGTTCCCAG +
Preference number: 4 (lower is better)
Translates to: YTPESSIGLKVQLVLLVQSWLWP*GIRSSQ
Trigger: CTGGGAACTCCGAATCCCTCACGGCCACAGCCAACT...CTGAACTAAAAGGACTAATTGTACTTTGAGGCCAATGCTGCTTTCTGGTGTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp TTATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAAGTTGGCTGTGGCCGTaGGGGATTCGGAGTTCCCAG +
Preference number: 4 (lower is better)
Translates to: LFTVTFSLALVHTARLCESWLWP*GIRSSQ
Trigger: CTGGGAACTCCGAATCCCTCACGGCCACAGCCAACT...TTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp CAGCAATTCTCAGTCATGCAAATGCCCGTGTTAAAGTTCTCCATTGGATTTAAAAGTTGGCTGTGGCCGTaGGGGATTCGGAGTTCCCAG +
Preference number: 4 (lower is better)
Translates to: QQFSVMQMPVLKFSIGFKSWLWP*GIRSSQ
Trigger: CTGGGAACTCCGAATCCCTCACGGCCACAGCCAACT...TTTAAATCCAATGGAGAACTTTAACACGGGCATTTGCATGACTGAGAATTGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR TCA 90 bp GTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACCAGGCCTTTCCAGCCGTCGCTGGTaGTGTAACACCTCATGCACC +
Preference number: 4 (lower is better)
Translates to: VMYQVLFHGFKKDLEPGLSSRRW*CNTSCT
Trigger: GGTGCATGAGGTGTTACATCACCAGCGACGGCTGGA...AAGGCCTGGTTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp TCTGTTAGGGTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACCGACTCGATGTGGCTaGTGGAGCTGCTGTGGGGTG +
Preference number: 4 (lower is better)
Translates to: SVRVMYQVLFHGFKKDLEPTRCG*WSCCGV
Trigger: CACCCCACAGCAGCTCCATCAGCCACATCGAGTCGG...TTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCACCCTAACAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp CTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTCATGGAAGATGTCCAGCTTaGTCTTCCGCTCGTGGAACA +
Preference number: 4 (lower is better)
Translates to: LSFQNNSELPVNLRGAFHGRCPA*SSARGT
Trigger: TGTTCCACGAGCGGAAGATCAAGCTGGACATCTTCC...ATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp CTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTCATTGCTCTAGCCGCTTATaGGTCTGCTCTGCATTGAGC +
Preference number: 4 (lower is better)
Translates to: LSFQNNSELPVNLRGAFHCSSRL*VCSALS
Trigger: GCTCAATGCAGAGCAGACTCATAAGCGGCTAGAGCA...ATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp GGCAGGCTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGACTTCTCCAGCTCTTTaGGGAAGATGTTGTTATGGA +
Preference number: 4 (lower is better)
Translates to: GRLSFQNNSELPVNLRGATSPAL*GRCCYG
Trigger: TCCATAACAACATCTTCCTCAAAGAGCTGGAGAAGT...CGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAGCCTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp CTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTCATCACTGTTTTATTGTCTaGGGATGGGGTGCGCCCAGA +
Preference number: 4 (lower is better)
Translates to: LSFQNNSELPVNLRGAFHHCFIV*GWGAPR
Trigger: TCTGGGCGCACCCCATCCTCAGACAATAAAACAGTG...ATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp GTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACCAGGCCTTTCAGCGCTGTCTCCCTaGGGGGTTGTTTCATCCCCA +
Preference number: 4 (lower is better)
Translates to: VMYQVLFHGFKKDLEPGLSALSP*GVVSSP
Trigger: TGGGGATGAAACAACCCCTCAGGGAGACAGCGCTGA...AAGGCCTGGTTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp GTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACCAGGCCTTTGGGAGGGGTGTGTGTaGCTCTTCATCCGGCTCATC +
Preference number: 4 (lower is better)
Translates to: VMYQVLFHGFKKDLEPGLWEGCV*LFIRLI
Trigger: GATGAGCCGGATGAAGAGTCACACACACCCCTCCCA...AAGGCCTGGTTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp ATTCAGGTCATCCACAGTGGACAGAACAGAACTTGCCAAGCTGGACTTTATGGAAGCAACGATGTACTCTaGGCGCGGCTTATTCTGACA +
Preference number: 4 (lower is better)
Translates to: IQVIHSGQNRTCQAGLYGSNDVL*ARLILT
Trigger: TGTCAGAATAAGCCGCGCTCAGAGTACATCGTTGCT...TCCATAAAGTCCAGCTTGGCAAGTTCTGTTCTGTCCACTGTGGATGACCTGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR TCA 90 bp GTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACCAGGCCTTGGAAGCCTGGCAGGTTaGGACCTCATCACAGCTGTG +
Preference number: 4 (lower is better)
Translates to: VMYQVLFHGFKKDLEPGLGSLAG*DLITAV
Trigger: CACAGCTGTGATGAGGTCTCAACCTGCCAGGCTTCC...AAGGCCTGGTTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp GGCAGGCTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGATGAACATGACTTCTTaGTGCTCCCGTCACTACTTT +
Preference number: 4 (lower is better)
Translates to: GRLSFQNNSELPVNLRGAMNMTS*CSRHYF
Trigger: AAAGTAGTGACGGGAGCATCAAGAAGTCATGTTCAT...CGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAGCCTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp GGCAGGCTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTACAGATCTTCAGGGTaGTTTCTCCAGAATCACAAG +
Preference number: 4 (lower is better)
Translates to: GRLSFQNNSELPVNLRGAYRSSG*FLQNHK
Trigger: CTTGTGATTCTGGAGAAATCACCCTGAAGATCTGTA...CGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAGCCTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp CTGACGAGGTTTAAGAGGTACATCTCTCAATTCAGAGAACTGCACGGAGTGAAAGACTGCTGCCAGATCTaGGAACCTTCCTCTCTGTAC +
Preference number: 4 (lower is better)
Translates to: LTRFKRYISQFRELHGVKDCCQI*EPSSLY
Trigger: GTACAGAGAGGAAGGTTCTCAGATCTGGCAGCAGTC...TTTCACTCCGTGCAGTTCTCTGAATTGAGAGATGTACCTCTTAAACCTCGTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp CTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTCATAGGTGTCATGGAGAGTaGTGTACTGGGGGTGCTGTA +
Preference number: 4 (lower is better)
Translates to: LSFQNNSELPVNLRGAFHRCHGE*CTGGAV
Trigger: TACAGCACCCCCAGTACATCACTCTCCATGACACCT...ATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp CTGACGAGGTTTAAGAGGTACATCTCTCAATTCAGAGAACTGCACGGAGTGAAAAGGTGTCATGGAGAGTaGTGTACTGGGGGTGCTGTA +
Preference number: 4 (lower is better)
Translates to: LTRFKRYISQFRELHGVKRCHGE*CTGGAV
Trigger: TACAGCACCCCCAGTACATCACTCTCCATGACACCT...TTTCACTCCGTGCAGTTCTCTGAATTGAGAGATGTACCTCTTAAACCTCGTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp GCTCCCTCATATTCTCACAAATCTAAATTGCCATGCTCTTCCACAGAGGCAAGAAGACCCCACTCAGCATaGCATATGTCAGAACCCCGA +
Preference number: 4 (lower is better)
Translates to: APSYSHKSKLPCSSTEARRPHSA*HMSEPR
Trigger: TCGGGGTTCTGACATATGTCATGCTGAGTGGGGTCT...TCTTGCCTCTGTGGAAGAGCATGGCAATTTAGATTTGTGAGAATATGAGGGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR TCA 90 bp CTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTCATAGACCCCACTCAGCATaGCATATGTCAGAACCCCGA +
Preference number: 4 (lower is better)
Translates to: LSFQNNSELPVNLRGAFHRPHSA*HMSEPR
Trigger: TCGGGGTTCTGACATATGTCATGCTGAGTGGGGTCT...ATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp GTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACCAGGCCTTGCTTGCGACGTTCTATaGAGCATGCTAGGCGGGAGG +
Preference number: 4 (lower is better)
Translates to: VMYQVLFHGFKKDLEPGLACDVL*SMLGGR
Trigger: CCTCCCGCCTAGCATGCTTCATAGAACGTCGCAAGC...AAGGCCTGGTTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp CTGACGAGGTTTAAGAGGTACATCTCTCAATTCAGAGAACTGCACGGAGTGAAACTGCTGCTCAGACCCTaGATAACCACTGACGAGGTT +
Preference number: 4 (lower is better)
Translates to: LTRFKRYISQFRELHGVKLLLRP*ITTDEV
Trigger: AACCTCGTCAGTGGTTATTCAGGGTCTGAGCAGCAG...TTTCACTCCGTGCAGTTCTCTGAATTGAGAGATGTACCTCTTAAACCTCGTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp CTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTCATATTCTGAGCTGCCAGTaGATTTGCGGGGAGCGTTTC +
Preference number: 4 (lower is better)
Translates to: LSFQNNSELPVNLRGAFHILSCQ*ICGERF
Trigger: GAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAAT...ATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp GGCAGGCTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGAATGCTCTGTTAGGGTaGTGTATCAGGTTTTGTTCC +
Preference number: 4 (lower is better)
Translates to: GRLSFQNNSELPVNLRGANALLG*CIRFCS
Trigger: GGAACAAAACCTGATACATCACCCTAACAGAGCATT...CGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAGCCTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp TCTGTTAGGGTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAATGCTGTGGCCCGCACTaGAGTCCTGGAGGACCACTG +
Preference number: 4 (lower is better)
Translates to: SVRVMYQVLFHGFKKDLECCGPH*SPGGPL
Trigger: CAGTGGTCCTCCAGGACTTCAGTGCGGGCCACAGCA...TTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCACCCTAACAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp TATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAACTGAGAAGCCGTCGCTaGAGCGGATGCACTGCAGCA +
Preference number: 4 (lower is better)
Translates to: YLQSHSVLLWFTLHVYVKLRSRR*SGCTAA
Trigger: TGCTGCAGTGCATCCGCTGCAGCGACGGCTTCTCAG...TTTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp CAGCAATTCTCAGTCATGCAAATGCCCGTGTTAAAGTTCTCCATTGGATTTAAACTGAGAAGCCGTCGCTaGAGCGGATGCACTGCAGCA +
Preference number: 4 (lower is better)
Translates to: QQFSVMQMPVLKFSIGFKLRSRR*SGCTAA
Trigger: TGCTGCAGTGCATCCGCTGCAGCGACGGCTTCTCAG...TTTAAATCCAATGGAGAACTTTAACACGGGCATTTGCATGACTGAGAATTGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp TATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAATGCTGCCGGGTGGAGTaGAGCTTGTCCAGGAGACTG +
Preference number: 4 (lower is better)
Translates to: YLQSHSVLLWFTLHVYVKCCRVE*SLSRRL
Trigger: CAGTCTCCTGGACAAGCTGCACTCCACCCGGCAGCA...TTTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp CATTTTAGACTTTGGAGAGAAGCTCAGCAACCTCGAATTGCACCCAGTAGAGAAGCAGACCACCTTCACTaGACATCTTGCACCAGGCAT +
Preference number: 4 (lower is better)
Translates to: HFRLWREAQQPRIAPSREADHLH*TSCTRH
Trigger: ATGCCTGGTGCAAGATGTGCAGTGAAGGTGGTCTGC...TTCTCTACTGGGTGCAATTCGAGGTTGCTGAGCTTCTCTCCAAAGTCTAAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp CTGACGAGGTTTAAGAGGTACATCTCTCAATTCAGAGAACTGCACGGAGTGAAAGCAGACCACCTTCACTaGACATCTTGCACCAGGCAT +
Preference number: 4 (lower is better)
Translates to: LTRFKRYISQFRELHGVKADHLH*TSCTRH
Trigger: ATGCCTGGTGCAAGATGTGCAGTGAAGGTGGTCTGC...TTTCACTCCGTGCAGTTCTCTGAATTGAGAGATGTACCTCTTAAACCTCGTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp TCTGTTAGGGTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAATGCGGTGCTGCCAGATaGTCTCCAGCCGTCGCTGGT +
Preference number: 4 (lower is better)
Translates to: SVRVMYQVLFHGFKKDLECGAAR*SPAVAG
Trigger: ACCAGCGACGGCTGGAGAGCATCTGGCAGCACCGCA...TTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCACCCTAACAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp TCTGTTAGGGTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAAAGCCGCACCTTGCGGTaGTGCCAGATGCTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: SVRVMYQVLFHGFKKDLESRTLR*CQMLSS
Trigger: GCTGGAGAGCATCTGGCAGCACCGCAAGGTGCGGCT...TTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCACCCTAACAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp GATAAAGAAACCGAAGCTCACACAAGACCACAAAGCAAGATTTTGCTGAGTCAATCATCATGCCTCTTCTaGAGGGCCCGGGCTCGATGT +
Preference number: 4 (lower is better)
Translates to: DKETEAHTRPQSKILLSQSSCLF*RARARC
Trigger: ACATCGAGCCCGGGCCCTGCAGAAGAGGCATGATGA...TTGACTCAGCAAAATCTTGCTTTGTGGTCTTGTGTGAGCTTCGGTTTCTTTATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439170.2
CDS-3UTR GCA 90 bp CATTTTAGACTTTGGAGAGAAGCTCAGCAACCTCGAATTGCACCCAGTAGAGAATCTTCAAAGTCATCATaGCTCTTCTGCAGGGCCCGG +
Preference number: 4 (lower is better)
Translates to: HFRLWREAQQPRIAPSRESSKSS*LFCRAR
Trigger: CCGGGCCCTGCAGAAGAGGCATGATGACTTTGAAGA...TTCTCTACTGGGTGCAATTCGAGGTTGCTGAGCTTCTCTCCAAAGTCTAAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp CTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTCATTCTTCAAAGTCATCATaGCTCTTCTGCAGGGCCCGG +
Preference number: 4 (lower is better)
Translates to: LSFQNNSELPVNLRGAFHSSKSS*LFCRAR
Trigger: CCGGGCCCTGCAGAAGAGGCATGATGACTTTGAAGA...ATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp GATAAAGAAACCGAAGCTCACACAAGACCACAAAGCAAGATTTTGCTGAGTCAACTCCAGGTGTCGAGCTaGCTTGTAGATCTCCTCGGG +
Preference number: 4 (lower is better)
Translates to: DKETEAHTRPQSKILLSQLQVSS*LVDLLG
Trigger: CCCGAGGAGATCTACAAGGCAGCTCGACACCTGGAG...TTGACTCAGCAAAATCTTGCTTTGTGGTCTTGTGTGAGCTTCGGTTTCTTTATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439170.2
CDS-3UTR GCA 90 bp ACAGATAAAGAAACCGAAGCTCACACAAGACCACAAAGCAAGATTTTGCTGAGTGCACGAAGTCTTGGATaGGCACCTCCAGGTGTCGAG +
Preference number: 4 (lower is better)
Translates to: TDKETEAHTRPQSKILLSARSLG*APPGVE
Trigger: CTCGACACCTGGAGGTGCGCATCCAAGACTTCGTGC...ACTCAGCAAAATCTTGCTTTGTGGTCTTGTGTGAGCTTCGGTTTCTTTATCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439170.2
CDS-3UTR GCA 90 bp TATACACCAGAAAGCAGCATTGGCCTCAAAGTACAATTAGTCCTTTTAGTTCAGTCCGCTGCTCCACCCTaGGCACGAAGTCTTGGATGC +
Preference number: 4 (lower is better)
Translates to: YTPESSIGLKVQLVLLVQSAAPP*ARSLGC
Trigger: GCATCCAAGACTTCGTGCGCAGGGTGGAGCAGCGGA...CTGAACTAAAAGGACTAATTGTACTTTGAGGCCAATGCTGCTTTCTGGTGTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp TATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAAAGGAGAAGCTTCCGCTaGTCCACCCTGCGCACGAAG +
Preference number: 4 (lower is better)
Translates to: YLQSHSVLLWFTLHVYVKRRSFR*STLRTK
Trigger: CTTCGTGCGCAGGGTGGAGCAGCGGAAGCTTCTCCT...TTTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp GTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACCAGGCCTTGGCGCTGACCTGAGCTaGTGGATAAGGTCTTCGCCT +
Preference number: 4 (lower is better)
Translates to: VMYQVLFHGFKKDLEPGLGADLS*WIRSSP
Trigger: AGGCGAAGACCTTATCCAGCAGCTCAGGTCAGCGCC...AAGGCCTGGTTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp GATAAAGAAACCGAAGCTCACACAAGACCACAAAGCAAGATTTTGCTGAGTCAAGGCGCTGACCTGAGCTaGTGGATAAGGTCTTCGCCT +
Preference number: 4 (lower is better)
Translates to: DKETEAHTRPQSKILLSQGADLS*WIRSSP
Trigger: AGGCGAAGACCTTATCCAGCAGCTCAGGTCAGCGCC...TTGACTCAGCAAAATCTTGCTTTGTGGTCTTGTGTGAGCTTCGGTTTCTTTATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439170.2
CDS-3UTR GCA 90 bp CTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTCATAACAGCTCCTCCATCTaGACCTGGGCATCATCAAGC +
Preference number: 4 (lower is better)
Translates to: LSFQNNSELPVNLRGAFHNSSSI*TWASSS
Trigger: GCTTGATGATGCCCAGGTGCAGATGGAGGAGCTGTT...ATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp CATTTTAGACTTTGGAGAGAAGCTCAGCAACCTCGAATTGCACCCAGTAGAGAAAACAGCTCCTCCATCTaGACCTGGGCATCATCAAGC +
Preference number: 4 (lower is better)
Translates to: HFRLWREAQQPRIAPSRENSSSI*TWASSS
Trigger: GCTTGATGATGCCCAGGTGCAGATGGAGGAGCTGTT...TTCTCTACTGGGTGCAATTCGAGGTTGCTGAGCTTCTCTCCAAAGTCTAAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp TCTGTTAGGGTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACGTTCTGTGTGGCGCTaGAGCCGCTGTTCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: SVRVMYQVLFHGFKKDLERSVWR*SRCSAR
Trigger: CCTGGCAGAACAGCGGCTGCAGCGCCACACAGAACG...TTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCACCCTAACAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp AAACTCTGTGTTTGGGGTTGGGGCTCTCTCTTGAGTGTGTTGGAAACTGGAGGAAATTCCAATAACTCTTaGACCTGGGCTGCCAGATCA +
Preference number: 4 (lower is better)
Translates to: KLCVWGWGSLLSVLETGGNSNNS*TWAARS
Trigger: TGATCTGGCAGCCCAGGTGCAAGAGTTATTGGAATT...TCCTCCAGTTTCCAACACACTCAAGAGAGAGCCCCAACCCCAAACACAGAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp TACAAAGACAGTCCTTTCCTGAGCCAGGTGCAATTCCAGAGAATGACACTTTGCGCATTGACTCTCCATTaGGGATCCATCCCAGAACCT +
Preference number: 4 (lower is better)
Translates to: YKDSPFLSQVQFQRMTLCALTLH*GSIPEP
Trigger: AGGTTCTGGGATGGATCCGCAATGGAGAGTCAATGC...GCAAAGTGTCATTCTCTGGAATTGCACCTGGCTCAGGAAAGGACTGTCTTTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp TTATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAATGGCCAGTTGGAACTaGTCGTGCTCCCGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: LFTVTFSLALVHTARLCEMASWN*SCSRCS
Trigger: GCTGCAGCGGGAGCACGAGCAGTTCCAACTGGCCAT...TTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp GCCAGTGTTTGGGAAAGGCTAAAGTTAACCCTCATCTTCTCTACCACACATCATAAGAAGGTGCCCGCATaGTCCAGGATAAGCTGGTTG +
Preference number: 4 (lower is better)
Translates to: ASVWERLKLTLIFSTTHHKKVPA*SRISWL
Trigger: CAACCAGCTTATCCTGGAGCATGCGGGCACCTTCTT...ATGATGTGTGGTAGAGAAGATGAGGGTTAACTTTAGCCTTTCCCAAACACTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp CATTTTAGACTTTGGAGAGAAGCTCAGCAACCTCGAATTGCACCCAGTAGAGAAAGAATCAACTCCCCCTaGACATCCAGGTTCTCGTCG +
Preference number: 4 (lower is better)
Translates to: HFRLWREAQQPRIAPSRERINSP*TSRFSS
Trigger: CGACGAGAACCTGGATGTGCAGGGGGAGTTGATTCT...TTCTCTACTGGGTGCAATTCGAGGTTGCTGAGCTTCTCTCCAAAGTCTAAAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp TATACACCAGAAAGCAGCATTGGCCTCAAAGTACAATTAGTCCTTTTAGTTCAGTCAAAGAGGAACAAGTaGCGCTCCCGCCCCTTCCGG +
Preference number: 4 (lower is better)
Translates to: YTPESSIGLKVQLVLLVQSKRNK*RSRPFR
Trigger: CCGGAAGGGGCGGGAGCGGCACTTGTTCCTCTTTGA...CTGAACTAAAAGGACTAATTGTACTTTGAGGCCAATGCTGCTTTCTGGTGTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp TATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAATGTCTGAGGATGGGGTaGGCCCAGACCACAAGGCGA +
Preference number: 4 (lower is better)
Translates to: YLQSHSVLLWFTLHVYVKCLRMG*AQTTRR
Trigger: TCGCCTTGTGGTCTGGGCGCACCCCATCCTCAGACA...TTTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp TTATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAATGTCTGAGGATGGGGTaGGCCCAGACCACAAGGCGA +
Preference number: 4 (lower is better)
Translates to: LFTVTFSLALVHTARLCECLRMG*AQTTRR
Trigger: TCGCCTTGTGGTCTGGGCGCACCCCATCCTCAGACA...TTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp GGCAGGCTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTCTTGATCCACTCCTaGTTGGTTTCAATGTTGGAG +
Preference number: 4 (lower is better)
Translates to: GRLSFQNNSELPVNLRGAFLIHS*LVSMLE
Trigger: CTCCAACATTGAAACCAAGCAGGAGTGGATCAAGAA...CGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAGCCTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp CAGCAATTCTCAGTCATGCAAATGCCCGTGTTAAAGTTCTCCATTGGATTTAAATGGTGTCTGGTTGGCTaGTCCCATCCCCCTGGCTGT +
Preference number: 4 (lower is better)
Translates to: QQFSVMQMPVLKFSIGFKWCLVG*SHPPGC
Trigger: ACAGCCAGGGGGATGGGAGCAGCCAACCAGACACCA...TTTAAATCCAATGGAGAACTTTAACACGGGCATTTGCATGACTGAGAATTGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp CATTTTAGACTTTGGAGAGAAGCTCAGCAACCTCGAATTGCACCCAGTAGAGAACCTCTTCACTCATGTTaGAGACCTCTAGGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: HFRLWREAQQPRIAPSREPLHSC*RPLGQQ
Trigger: CTGCTGCCCTAGAGGTCTGCAACATGAGTGAAGAGG...TTCTCTACTGGGTGCAATTCGAGGTTGCTGAGCTTCTCTCCAAAGTCTAAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp TACAAAGACAGTCCTTTCCTGAGCCAGGTGCAATTCCAGAGAATGACACTTTGCTGGAATCATCATCTCTaGCTCTTGCCTTGGTGTGGG +
Preference number: 4 (lower is better)
Translates to: YKDSPFLSQVQFQRMTLCWNHHL*LLPWCG
Trigger: CCCACACCAAGGCAAGAGGCAGAGATGATGATTCCA...GCAAAGTGTCATTCTCTGGAATTGCACCTGGCTCAGGAAAGGACTGTCTTTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp ATTCAGGTCATCCACAGTGGACAGAACAGAACTTGCCAAGCTGGACTTTATGGACACCCCAACCTTTCTTaGTCTTCTCATCAGCGCTGT +
Preference number: 4 (lower is better)
Translates to: IQVIHSGQNRTCQAGLYGHPNLS*SSHQRC
Trigger: ACAGCGCTGATGAGAAGAGCAAGAAAGGTTGGGGTG...TCCATAAAGTCCAGCTTGGCAAGTTCTGTTCTGTCCACTGTGGATGACCTGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR GCA 90 bp AGCAGAAACTCAACTTGTTATAAAAACTCAGAATGGCTCAGCAGGGGGATCTTGACTTCAGTGGAAGCCTaGCGGGCTGCTAGCAAAGAG +
Preference number: 4 (lower is better)
Translates to: SRNSTCYKNSEWLSRGILTSVEA*RAASKE
Trigger: CTCTTTGCTAGCAGCCCGGCAGGCTTCCACTGAAGT...CAAGATCCCCCTGCTGAGCCATTCTGAGTTTTTATAACAAGTTGAGTTTCTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR GCA 90 bp GGCAGGCTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGGACCAACTTTTCTATTaGATTGACAAGGTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: GRLSFQNNSELPVNLRGADQLFY*IDKVCS
Trigger: GCTGCAGACCTTGTCAATGCAATAGAAAAGTTGGTC...CGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAGCCTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp TCTGTTAGGGTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAATCCTGCACCCAGGCCTaGTGGATGTCAGCGTTGGCG +
Preference number: 4 (lower is better)
Translates to: SVRVMYQVLFHGFKKDLESCTQA*WMSALA
Trigger: CGCCAACGCTGACATCCAGCAGGCCTGGGTGCAGGA...TTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCACCCTAACAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp CTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTCATCCCGTCACTACTTTCTaGTGCTGTGGCTTTGGTGAG +
Preference number: 4 (lower is better)
Translates to: LSFQNNSELPVNLRGAFHPVTTF*CCGFGE
Trigger: CTCACCAAAGCCACAGCAGCAGAAAGTAGTGACGGG...ATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp CTGACGAGGTTTAAGAGGTACATCTCTCAATTCAGAGAACTGCACGGAGTGAAACCCGTCACTACTTTCTaGTGCTGTGGCTTTGGTGAG +
Preference number: 4 (lower is better)
Translates to: LTRFKRYISQFRELHGVKPVTTF*CCGFGE
Trigger: CTCACCAAAGCCACAGCAGCAGAAAGTAGTGACGGG...TTTCACTCCGTGCAGTTCTCTGAATTGAGAGATGTACCTCTTAAACCTCGTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp ATTCAGGTCATCCACAGTGGACAGAACAGAACTTGCCAAGCTGGACTTTATGGACCACAGACTTTGCACTaGAGTATCACTGTGTCCCCA +
Preference number: 4 (lower is better)
Translates to: IQVIHSGQNRTCQAGLYGPQTLH*SITVSP
Trigger: TGGGGACACAGTGATACTGCAGTGCAAAGTCTGTGG...TCCATAAAGTCCAGCTTGGCAAGTTCTGTTCTGTCCACTGTGGATGACCTGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR GCA 90 bp GTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACCAGGCCTTGGGGCGGTTAGGGGCTaGTGGAACACCTTGCACTTT +
Preference number: 4 (lower is better)
Translates to: VMYQVLFHGFKKDLEPGLGAVRG*WNTLHF
Trigger: AAAGTGCAAGGTGTTCCAGCAGCCCCTAACCGCCCC...AAGGCCTGGTTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp AGCAGAAACTCAACTTGTTATAAAAACTCAGAATGGCTCAGCAGGGGGATCTTGCTGCCATTATGGGGCTaGAGCCATGGATGCTGCAAG +
Preference number: 4 (lower is better)
Translates to: SRNSTCYKNSEWLSRGILLPLWG*SHGCCK
Trigger: CTTGCAGCATCCATGGCTGCAGCCCCATAATGGCAG...CAAGATCCCCCTGCTGAGCCATTCTGAGTTTTTATAACAAGTTGAGTTTCTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR GCA 90 bp GTAAAAGCTGATATGAAAGCTTGGGGTCTGTCTAACATTCTGTCAACTGCCCCCTTCCCTAAGCACGGTTaGCCTCAGAGCAACCTAAAG +
Preference number: 4 (lower is better)
Translates to: VKADMKAWGLSNILSTAPFPKHG*PQSNLK
Trigger: CTTTAGGTTGCTCTGAGGGCAACCGTGCTTAGGGAA...GGGGGCAGTTGACAGAATGTTAGACAGACCCCAAGCTTTCATATCAGCTTTTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR GCA 90 bp GTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACCAGGCCTTTGCAGGGCACTCTGGTaGGTCTTCTCGATGGCCAGT +
Preference number: 4 (lower is better)
Translates to: VMYQVLFHGFKKDLEPGLCRALW*VFSMAS
Trigger: ACTGGCCATCGAGAAGACGCACCAGAGTGCCCTGCA...AAGGCCTGGTTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000354186.8
CDS-3UTR CCA 90 bp GTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACCAGGCCTTCAGGGAAGGTCAGGATaGGTCCGCCTCGCTTATCAC +
Preference number: 4 (lower is better)
Translates to: VMYQVLFHGFKKDLEPGLQGRSG*VRLAYH
Trigger: GTGATAAGCGAGGCGGACCCATCCTGACCTTCCCTG...AAGGCCTGGTTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp CTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTCATCACATGGATCTCAGCTaGAAAGGCTTCCTGCAGCGT +
Preference number: 4 (lower is better)
Translates to: LSFQNNSELPVNLRGAFHHMDLS*KGFLQR
Trigger: ACGCTGCAGGAAGCCTTTCCAGCTGAGATCCATGTG...ATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp CTGACGAGGTTTAAGAGGTACATCTCTCAATTCAGAGAACTGCACGGAGTGAAACACATGGATCTCAGCTaGAAAGGCTTCCTGCAGCGT +
Preference number: 4 (lower is better)
Translates to: LTRFKRYISQFRELHGVKHMDLS*KGFLQR
Trigger: ACGCTGCAGGAAGCCTTTCCAGCTGAGATCCATGTG...TTTCACTCCGTGCAGTTCTCTGAATTGAGAGATGTACCTCTTAAACCTCGTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp CATTTTAGACTTTGGAGAGAAGCTCAGCAACCTCGAATTGCACCCAGTAGAGAACACATGGATCTCAGCTaGAAAGGCTTCCTGCAGCGT +
Preference number: 4 (lower is better)
Translates to: HFRLWREAQQPRIAPSREHMDLS*KGFLQR
Trigger: ACGCTGCAGGAAGCCTTTCCAGCTGAGATCCATGTG...TTCTCTACTGGGTGCAATTCGAGGTTGCTGAGCTTCTCTCCAAAGTCTAAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp GTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACCAGGCCTTAACTCCTCCGTCAGCTaGGAGGGGTCCACCAGCTTT +
Preference number: 4 (lower is better)
Translates to: VMYQVLFHGFKKDLEPGLNSSVS*EGSTSF
Trigger: AAAGCTGGTGGACCCCTCCCAGCTGACGGAGGAGTT...AAGGCCTGGTTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp CTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTCATACTCCGATCTCCGTGTaGCTCTGGAGGAATAACTCC +
Preference number: 4 (lower is better)
Translates to: LSFQNNSELPVNLRGAFHTPISV*LWRNNS
Trigger: GGAGTTATTCCTCCAGAGCCACACGGAGATCGGAGT...ATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp GTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACCAGGCCTTCAGACATGGCGAGGATaGTGCTGCGTTCATCCAGGG +
Preference number: 4 (lower is better)
Translates to: VMYQVLFHGFKKDLEPGLQTWRG*CCVHPG
Trigger: CCCTGGATGAACGCAGCACCATCCTCGCCATGTCTG...AAGGCCTGGTTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp GCCAGTGTTTGGGAAAGGCTAAAGTTAACCCTCATCTTCTCTACCACACATCATGTCTTGCATCTCGGATaGCAGACCACCTTCACTGCA +
Preference number: 4 (lower is better)
Translates to: ASVWERLKLTLIFSTTHHVLHLG*QTTFTA
Trigger: TGCAGTGAAGGTGGTCTGCCATCCGAGATGCAAGAC...ATGATGTGTGGTAGAGAAGATGAGGGTTAACTTTAGCCTTTCCCAAACACTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp CATTTTAGACTTTGGAGAGAAGCTCAGCAACCTCGAATTGCACCCAGTAGAGAATACAAGGTCTGGTGGTaGTGGATTGCCAGCTCTAGG +
Preference number: 4 (lower is better)
Translates to: HFRLWREAQQPRIAPSREYKVWW*WIASSR
Trigger: CCTAGAGCTGGCAATCCACCACCACCAGACCTTGTA...TTCTCTACTGGGTGCAATTCGAGGTTGCTGAGCTTCTCTCCAAAGTCTAAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp GATAAAGAAACCGAAGCTCACACAAGACCACAAAGCAAGATTTTGCTGAGTCAACTGCGCACGAAGTCTTaGATGCGCACCTCCAGGTGT +
Preference number: 4 (lower is better)
Translates to: DKETEAHTRPQSKILLSQLRTKS*MRTSRC
Trigger: ACACCTGGAGGTGCGCATCCAAGACTTCGTGCGCAG...TTGACTCAGCAAAATCTTGCTTTGTGGTCTTGTGTGAGCTTCGGTTTCTTTATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439170.2
CDS-3UTR CCA 90 bp TGGAGAGAAGCTCAGCAACCTCGAATTGCACCCAGTAGAGAAGAAGGGAGCCCCTCATGCTGCTTCTCATaGAGAAATTCCAATAACTCT +
Preference number: 4 (lower is better)
Translates to: WREAQQPRIAPSREEGSPSCCFS*RNSNNS
Trigger: AGAGTTATTGGAATTTCTCCATGAGAAGCAGCATGA...GGGGCTCCCTTCTTCTCTACTGGGTGCAATTCGAGGTTGCTGAGCTTCTCTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp GCCAGTGTTTGGGAAAGGCTAAAGTTAACCCTCATCTTCTCTACCACACATCATGAAAGAGGGACTCGATaGCCAGTTGGAACTGCTCGT +
Preference number: 4 (lower is better)
Translates to: ASVWERLKLTLIFSTTHHERGTR*PVGTAR
Trigger: ACGAGCAGTTCCAACTGGCCATCGAGTCCCTCTTTC...ATGATGTGTGGTAGAGAAGATGAGGGTTAACTTTAGCCTTTCCCAAACACTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240874.7
CDS-3UTR CCA 90 bp CTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTCATATGAGGGGAATGACATaGTCGATCTCTGCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: LSFQNNSELPVNLRGAFHMRGMT*SISAAG
Trigger: GCCAGCAGCAGAGATCGACCATGTCATTCCCCTCAT...ATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp CATTTTAGACTTTGGAGAGAAGCTCAGCAACCTCGAATTGCACCCAGTAGAGAAGGAGCTCACTCAGGATaGCTTTCACTTGTTGCTCGG +
Preference number: 4 (lower is better)
Translates to: HFRLWREAQQPRIAPSREGAHSG*LSLVAR
Trigger: CCGAGCAACAAGTGAAAGCCATCCTGAGTGAGCTCC...TTCTCTACTGGGTGCAATTCGAGGTTGCTGAGCTTCTCTCCAAAGTCTAAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp CTGACGAGGTTTAAGAGGTACATCTCTCAATTCAGAGAACTGCACGGAGTGAAAGGAGCTCACTCAGGATaGCTTTCACTTGTTGCTCGG +
Preference number: 4 (lower is better)
Translates to: LTRFKRYISQFRELHGVKGAHSG*LSLVAR
Trigger: CCGAGCAACAAGTGAAAGCCATCCTGAGTGAGCTCC...TTTCACTCCGTGCAGTTCTCTGAATTGAGAGATGTACCTCTTAAACCTCGTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp TACAAAGACAGTCCTTTCCTGAGCCAGGTGCAATTCCAGAGAATGACACTTTGCCTGTGGTCTCTCCAGTaGAGGTATGTGTTGAGAGGT +
Preference number: 4 (lower is better)
Translates to: YKDSPFLSQVQFQRMTLCLWSLQ*RYVLRG
Trigger: ACCTCTCAACACATACCTCCACTGGAGAGACCACAG...GCAAAGTGTCATTCTCTGGAATTGCACCTGGCTCAGGAAAGGACTGTCTTTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp GCCAGTGTTTGGGAAAGGCTAAAGTTAACCCTCATCTTCTCTACCACACATCATCCTGAGTCTCCTCTGTaGTCTCTCCAGTGGAGGTAT +
Preference number: 4 (lower is better)
Translates to: ASVWERLKLTLIFSTTHHPESPL*SLQWRY
Trigger: ATACCTCCACTGGAGAGACCACAGAGGAGACTCAGG...ATGATGTGTGGTAGAGAAGATGAGGGTTAACTTTAGCCTTTCCCAAACACTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp CTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTCATCCTGAGTCTCCTCTGTaGTCTCTCCAGTGGAGGTAT +
Preference number: 4 (lower is better)
Translates to: LSFQNNSELPVNLRGAFHPESPL*SLQWRY
Trigger: ATACCTCCACTGGAGAGACCACAGAGGAGACTCAGG...ATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp CTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTCATAGGAAGAGATGGAGTTaGCCAGACCATGCCGCTGTT +
Preference number: 4 (lower is better)
Translates to: LSFQNNSELPVNLRGAFHRKRWS*PDHAAV
Trigger: AACAGCGGCATGGTCTGGCCAACTCCATCTCTTCCT...ATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp CATTTTAGACTTTGGAGAGAAGCTCAGCAACCTCGAATTGCACCCAGTAGAGAACTCTGTGTTTGGGGTTaGGGCTCTCTCTTGAGTGTG +
Preference number: 4 (lower is better)
Translates to: HFRLWREAQQPRIAPSRELCVWG*GSLLSV
Trigger: CACACTCAAGAGAGAGCCCCAACCCCAAACACAGAG...TTCTCTACTGGGTGCAATTCGAGGTTGCTGAGCTTCTCTCCAAAGTCTAAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp TATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAATGTTGGTGGAGCGCTTaGGACCCGGGGAACTGTGGA +
Preference number: 4 (lower is better)
Translates to: YLQSHSVLLWFTLHVYVKCWWSA*DPGNCG
Trigger: TCCACAGTTCCCCGGGTCCCAAGCGCTCCACCAACA...TTTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp TTATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAATGTTGGTGGAGCGCTTaGGACCCGGGGAACTGTGGA +
Preference number: 4 (lower is better)
Translates to: LFTVTFSLALVHTARLCECWWSA*DPGNCG
Trigger: TCCACAGTTCCCCGGGTCCCAAGCGCTCCACCAACA...TTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp CTGACGAGGTTTAAGAGGTACATCTCTCAATTCAGAGAACTGCACGGAGTGAAATTTCATCCCCAGGCTTaGGAGATCCCAGGTCAAAGC +
Preference number: 4 (lower is better)
Translates to: LTRFKRYISQFRELHGVKFHPQA*EIPGQS
Trigger: GCTTTGACCTGGGATCTCCCAAGCCTGGGGATGAAA...TTTCACTCCGTGCAGTTCTCTGAATTGAGAGATGTACCTCTTAAACCTCGTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp GGCAGGCTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGAATCTGTCTTGCTCCTaGATACACTTTTCCAGTTCC +
Preference number: 4 (lower is better)
Translates to: GRLSFQNNSELPVNLRGANLSCS*IHFSSS
Trigger: GGAACTGGAAAAGTGTATCCAGGAGCAAGACAGATT...CGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAGCCTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp TATACACCAGAAAGCAGCATTGGCCTCAAAGTACAATTAGTCCTTTTAGTTCAGACACGCGCCTCTCTTTaGTCCGGGACTGCATGCCTG +
Preference number: 4 (lower is better)
Translates to: YTPESSIGLKVQLVLLVQTRASL*SGTACL
Trigger: CAGGCATGCAGTCCCGGACCAAAGAGAGGCGCGTGT...CTGAACTAAAAGGACTAATTGTACTTTGAGGCCAATGCTGCTTTCTGGTGTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp CTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTCATTTGTCCCCAGGCTGGTaGTATTCAAACCCTGGACTG +
Preference number: 4 (lower is better)
Translates to: LSFQNNSELPVNLRGAFHLSPGW*YSNPGL
Trigger: CAGTCCAGGGTTTGAATACCACCAGCCTGGGGACAA...ATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp ATTCAGGTCATCCACAGTGGACAGAACAGAACTTGCCAAGCTGGACTTTATGGAAACTTGTCCCCAGGCTaGTGGTATTCAAACCCTGGA +
Preference number: 4 (lower is better)
Translates to: IQVIHSGQNRTCQAGLYGNLSPG*WYSNPG
Trigger: TCCAGGGTTTGAATACCACCAGCCTGGGGACAAGTT...TCCATAAAGTCCAGCTTGGCAAGTTCTGTTCTGTCCACTGTGGATGACCTGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR CCA 90 bp TTGACCATACTGAATAAGGACATGGTGAGTTTGAACTTTGCCCTACTACAAAGATTGACGGCGAGGACCTaGACCACCTCACCTTGGCTC +
Preference number: 4 (lower is better)
Translates to: LTILNKDMVSLNFALLQRLTART*TTSPWL
Trigger: GAGCCAAGGTGAGGTGGTCCAGGTCCTCGCCGTCAA...TCTTTGTAGTAGGGCAAAGTTCAAACTCACCATGTCCTTATTCAGTATGGTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR CCA 90 bp ATGTGCGATGGTCCCTATGGGGAAACCTGTCCACTTATGAATAAGGCCCTTTGTAAGGATGTTCTGGTCTaGACCCTTCCAAGTGATGGT +
Preference number: 4 (lower is better)
Translates to: MCDGPYGETCPLMNKALCKDVLV*TLPSDG
Trigger: ACCATCACTTGGAAGGGTCCAGACCAGAACATCCTT...ACAAAGGGCCTTATTCATAAGTGGACAGGTTTCCCCATAGGGACCATCGCACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR CCA 90 bp TATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAAGTGCAGCTTCTCTCCTaGGCAATGGGGCGGTTAGGG +
Preference number: 4 (lower is better)
Translates to: YLQSHSVLLWFTLHVYVKVQLLS*AMGRLG
Trigger: CCCTAACCGCCCCATTGCCCAGGAGAGAAGCTGCAC...TTTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp AGCAGAAACTCAACTTGTTATAAAAACTCAGAATGGCTCAGCAGGGGGATCTTGGGCCCTTTGTCTGAATaGCCAGTGAAGCCCACTCCA +
Preference number: 4 (lower is better)
Translates to: SRNSTCYKNSEWLSRGILGPLSE*PVKPTP
Trigger: TGGAGTGGGCTTCACTGGCCATTCAGACAAAGGGCC...CAAGATCCCCCTGCTGAGCCATTCTGAGTTTTTATAACAAGTTGAGTTTCTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR CCA 90 bp ATTCAGGTCATCCACAGTGGACAGAACAGAACTTGCCAAGCTGGACTTTATGGAGTGCGATGGTCCCTATaGGGAAACCTGTCCACTTAT +
Preference number: 4 (lower is better)
Translates to: IQVIHSGQNRTCQAGLYGVRWSL*GNLSTY
Trigger: ATAAGTGGACAGGTTTCCCCATAGGGACCATCGCAC...TCCATAAAGTCCAGCTTGGCAAGTTCTGTTCTGTCCACTGTGGATGACCTGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR CCA 90 bp TTATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAACCGTCTGCCCCACCTaGATGGTCAGCTCACTGCTG +
Preference number: 4 (lower is better)
Translates to: LFTVTFSLALVHTARLCETVCPT*MVSSLL
Trigger: CAGCAGTGAGCTGACCATCCAGGTGGGGCAGACGGT...TTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp TCTGTTAGGGTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAAGCGGGCTCCGTTCGGTaGTACGGACCAGACACCAAC +
Preference number: 4 (lower is better)
Translates to: SVRVMYQVLFHGFKKDLEAGSVR*YGPDTN
Trigger: GTTGGTGTCTGGTCCGTACCACCGAACGGAGCCCGC...TTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCACCCTAACAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp TTATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAGGTCCACCAGCTTTGTaGGGCCCTCCACAGATACCA +
Preference number: 4 (lower is better)
Translates to: LFTVTFSLALVHTARLCEGPPAL*GPPQIP
Trigger: TGGTATCTGTGGAGGGCCTCACAAAGCTGGTGGACC...TTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp TATACACCAGAAAGCAGCATTGGCCTCAAAGTACAATTAGTCCTTTTAGTTCAGGGTCCACCAGCTTTGTaGGGCCCTCCACAGATACCA +
Preference number: 4 (lower is better)
Translates to: YTPESSIGLKVQLVLLVQGPPAL*GPPQIP
Trigger: TGGTATCTGTGGAGGGCCTCACAAAGCTGGTGGACC...CTGAACTAAAAGGACTAATTGTACTTTGAGGCCAATGCTGCTTTCTGGTGTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp TCTGTTAGGGTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAAGTGTGTGTTCGTCAATaGGCCGCCGAGAGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: SVRVMYQVLFHGFKKDLEVCVRQ*AAESPP
Trigger: TGGAGGGCTCTCGGCGGCTCATTGACGAACACACAC...TTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCACCCTAACAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp CATTTTAGACTTTGGAGAGAAGCTCAGCAACCTCGAATTGCACCCAGTAGAGAACTGCTTGATTTGTTGTaGGGCATAATGACCGGCCTC +
Preference number: 4 (lower is better)
Translates to: HFRLWREAQQPRIAPSRELLDLL*GIMTGL
Trigger: GAGGCCGGTCATTATGCCTCACAACAAATCAAGCAG...TTCTCTACTGGGTGCAATTCGAGGTTGCTGAGCTTCTCTCCAAAGTCTAAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR TCA 90 bp CTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTCATGAGTCTGCTCTGCATTaGGCTCCAATTCATGCTGCT +
Preference number: 4 (lower is better)
Translates to: LSFQNNSELPVNLRGAFHESALH*APIHAA
Trigger: AGCAGCATGAATTGGAGCTCAATGCAGAGCAGACTC...ATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp GTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACCAGGCCTTACTTCAGCCTGGAGGTaGCGTAATTGGAGGCACTGC +
Preference number: 4 (lower is better)
Translates to: VMYQVLFHGFKKDLEPGLTSAWR*RNWRHC
Trigger: GCAGTGCCTCCAATTACGTCACCTCCAGGCTGAAGT...AAGGCCTGGTTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp TATACACCAGAAAGCAGCATTGGCCTCAAAGTACAATTAGTCCTTTTAGTTCAGCTTCCATCTTCAGCATaGGCTGCTGCCAGTGGAGGG +
Preference number: 4 (lower is better)
Translates to: YTPESSIGLKVQLVLLVQLPSSA*AAASGG
Trigger: CCCTCCACTGGCAGCAGCTCATGCTGAAGATGGAAG...CTGAACTAAAAGGACTAATTGTACTTTGAGGCCAATGCTGCTTTCTGGTGTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp TATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAACTTCCATCTTCAGCATaGGCTGCTGCCAGTGGAGGG +
Preference number: 4 (lower is better)
Translates to: YLQSHSVLLWFTLHVYVKLPSSA*AAASGG
Trigger: CCCTCCACTGGCAGCAGCTCATGCTGAAGATGGAAG...TTTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp CTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTCATAGGCCACAGAGGCATTaGCCAATTTTAGCCGGTCTT +
Preference number: 4 (lower is better)
Translates to: LSFQNNSELPVNLRGAFHRPQRH*PILAGL
Trigger: AAGACCGGCTAAAATTGGTCAATGCCTCTGTGGCCT...ATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp CTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTCATGCTTGGCAGGCACCCTaGATTCCCCATATTCTTTCA +
Preference number: 4 (lower is better)
Translates to: LSFQNNSELPVNLRGAFHAWQAP*IPHILS
Trigger: TGAAAGAATATGGGGAATTCAGGGTGCCTGCCAAGC...ATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp GCCAGTGTTTGGGAAAGGCTAAAGTTAACCCTCATCTTCTCTACCACACATCATAAGCTATCGGCCAGCTaGATCAGAAGCTTCACCTTC +
Preference number: 4 (lower is better)
Translates to: ASVWERLKLTLIFSTTHHKLSAS*IRSFTF
Trigger: GAAGGTGAAGCTTCTGATTCAGCTGGCCGATAGCTT...ATGATGTGTGGTAGAGAAGATGAGGGTTAACTTTAGCCTTTCCCAAACACTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR TCA 90 bp CTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTCATAAGCTATCGGCCAGCTaGATCAGAAGCTTCACCTTC +
Preference number: 4 (lower is better)
Translates to: LSFQNNSELPVNLRGAFHKLSAS*IRSFTF
Trigger: GAAGGTGAAGCTTCTGATTCAGCTGGCCGATAGCTT...ATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp TACAAAGACAGTCCTTTCCTGAGCCAGGTGCAATTCCAGAGAATGACACTTTGCCTTATCTCCGTGGCATaGATGTGGCCTTTTTCCACA +
Preference number: 4 (lower is better)
Translates to: YKDSPFLSQVQFQRMTLCLISVA*MWPFST
Trigger: TGTGGAAAAAGGCCACATTCATGCCACGGAGATAAG...GCAAAGTGTCATTCTCTGGAATTGCACCTGGCTCAGGAAAGGACTGTCTTTGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR TCA 90 bp AAACTCTGTGTTTGGGGTTGGGGCTCTCTCTTGAGTGTGTTGGAAACTGGAGGAACTTCTCCAGCTCTTTaGGGAAGATGTTGTTATGGA +
Preference number: 4 (lower is better)
Translates to: KLCVWGWGSLLSVLETGGTSPAL*GRCCYG
Trigger: TCCATAACAACATCTTCCTCAAAGAGCTGGAGAAGT...TCCTCCAGTTTCCAACACACTCAAGAGAGAGCCCCAACCCCAAACACAGAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR TCA 90 bp GCCAGTGTTTGGGAAAGGCTAAAGTTAACCCTCATCTTCTCTACCACACATCATGGTGTGGGGTTTCCATaGAACTCTGTGTTTGGGGTT +
Preference number: 4 (lower is better)
Translates to: ASVWERLKLTLIFSTTHHGVGFP*NSVFGV
Trigger: AACCCCAAACACAGAGTTTCATGGAAACCCCACACC...ATGATGTGTGGTAGAGAAGATGAGGGTTAACTTTAGCCTTTCCCAAACACTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR TCA 90 bp AAACTCTGTGTTTGGGGTTGGGGCTCTCTCTTGAGTGTGTTGGAAACTGGAGGATGCAATTCCAGAGAATaGCACTTTGCATTGAGAGCA +
Preference number: 4 (lower is better)
Translates to: KLCVWGWGSLLSVLETGGCNSRE*HFALRA
Trigger: TGCTCTCAATGCAAAGTGTCATTCTCTGGAATTGCA...TCCTCCAGTTTCCAACACACTCAAGAGAGAGCCCCAACCCCAAACACAGAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR TCA 90 bp CATTTTAGACTTTGGAGAGAAGCTCAGCAACCTCGAATTGCACCCAGTAGAGAAAAGACAGTCCTTTCCTaGGCCAGGTGCAATTCCAGA +
Preference number: 4 (lower is better)
Translates to: HFRLWREAQQPRIAPSREKTVLS*ARCNSR
Trigger: TCTGGAATTGCACCTGGCTCAGGAAAGGACTGTCTT...TTCTCTACTGGGTGCAATTCGAGGTTGCTGAGCTTCTCTCCAAAGTCTAAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR TCA 90 bp CTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTCATAGCAACGATGTACTCTaGGCGCGGCTTATTCTGACA +
Preference number: 4 (lower is better)
Translates to: LSFQNNSELPVNLRGAFHSNDVL*ARLILT
Trigger: TGTCAGAATAAGCCGCGCTCAGAGTACATCGTTGCT...ATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp TCTGTTAGGGTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAATGCAGCAGCTTCCCCTaGGCAGTCAGAGTGCCCTCA +
Preference number: 4 (lower is better)
Translates to: SVRVMYQVLFHGFKKDLECSSFP*AVRVPS
Trigger: TGAGGGCACTCTGACTGCTCAGGGGAAGCTGCTGCA...TTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCACCCTAACAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp CCCAGGATCATCATCATCTGGGATTCCTTGTTATTTCCAACTTGCTGTGGAGAAGTGCATAGTAATCTTTaGTCACGGCCATGGACGAGG +
Preference number: 4 (lower is better)
Translates to: PRIIIIWDSLLFPTCCGEVHSNL*SRPWTR
Trigger: CCTCGTCCATGGCCGTGATCAAAGATTACTATGCAC...TTCTCCACAGCAAGTTGGAAATAACAAGGAATCCCAGATGATGATGATCCTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR TCA 90 bp CTGACGAGGTTTAAGAGGTACATCTCTCAATTCAGAGAACTGCACGGAGTGAAAGTGCATAGTAATCTTTaGTCACGGCCATGGACGAGG +
Preference number: 4 (lower is better)
Translates to: LTRFKRYISQFRELHGVKVHSNL*SRPWTR
Trigger: CCTCGTCCATGGCCGTGATCAAAGATTACTATGCAC...TTTCACTCCGTGCAGTTCTCTGAATTGAGAGATGTACCTCTTAAACCTCGTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp CTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTCATGTGCATAGTAATCTTTaGTCACGGCCATGGACGAGG +
Preference number: 4 (lower is better)
Translates to: LSFQNNSELPVNLRGAFHVHSNL*SRPWTR
Trigger: CCTCGTCCATGGCCGTGATCAAAGATTACTATGCAC...ATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp TATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAAACATGTTCTGCTGGTTaGCGGCGAGGACCTGGACCA +
Preference number: 4 (lower is better)
Translates to: YLQSHSVLLWFTLHVYVKTCSAG*RRGPGP
Trigger: TGGTCCAGGTCCTCGCCGTCAACCAGCAGAACATGT...TTTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp TATACACCAGAAAGCAGCATTGGCCTCAAAGTACAATTAGTCCTTTTAGTTCAGACATGTTCTGCTGGTTaGCGGCGAGGACCTGGACCA +
Preference number: 4 (lower is better)
Translates to: YTPESSIGLKVQLVLLVQTCSAG*RRGPGP
Trigger: TGGTCCAGGTCCTCGCCGTCAACCAGCAGAACATGT...CTGAACTAAAAGGACTAATTGTACTTTGAGGCCAATGCTGCTTTCTGGTGTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp TATACACCAGAAAGCAGCATTGGCCTCAAAGTACAATTAGTCCTTTTAGTTCAGGCAACCCTGCAGTTGTaGAGGTACTGCAGAGCCTCC +
Preference number: 4 (lower is better)
Translates to: YTPESSIGLKVQLVLLVQATLQL*RYCRAS
Trigger: GGAGGCTCTGCAGTACCTTCACAACTGCAGGGTTGC...CTGAACTAAAAGGACTAATTGTACTTTGAGGCCAATGCTGCTTTCTGGTGTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp TTATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAGCAACCCTGCAGTTGTaGAGGTACTGCAGAGCCTCC +
Preference number: 4 (lower is better)
Translates to: LFTVTFSLALVHTARLCEATLQL*RYCRAS
Trigger: GGAGGCTCTGCAGTACCTTCACAACTGCAGGGTTGC...TTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp GTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACCAGGCCTTCGGGGATGCCTTGAATaGCTTCTGGGGCAGCAAACT +
Preference number: 4 (lower is better)
Translates to: VMYQVLFHGFKKDLEPGLRGCLE*LLGQQT
Trigger: AGTTTGCTGCCCCAGAAGTCATTCAAGGCATCCCCG...AAGGCCTGGTTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp CTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTCATCCACCCTGCATACGTTaGTACATGTCTCCTCTTTGC +
Preference number: 4 (lower is better)
Translates to: LSFQNNSELPVNLRGAFHPPCIR*YMSPLC
Trigger: GCAAAGAGGAGACATGTATCAACGTATGCAGGGTGG...ATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp CTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTCATATTCATGGGGGAAGCTaGAATCCACCCTGCATACGT +
Preference number: 4 (lower is better)
Translates to: LSFQNNSELPVNLRGAFHIHGGS*NPPCIR
Trigger: ACGTATGCAGGGTGGATTTCAGCTTCCCCCATGAAT...ATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp TATACACCAGAAAGCAGCATTGGCCTCAAAGTACAATTAGTCCTTTTAGTTCAGGCTTGCGACGTTCTATaGAGCATGCTAGGCGGGAGG +
Preference number: 4 (lower is better)
Translates to: YTPESSIGLKVQLVLLVQACDVL*SMLGGR
Trigger: CCTCCCGCCTAGCATGCTTCATAGAACGTCGCAAGC...CTGAACTAAAAGGACTAATTGTACTTTGAGGCCAATGCTGCTTTCTGGTGTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp TTATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAGCTTGCGACGTTCTATaGAGCATGCTAGGCGGGAGG +
Preference number: 4 (lower is better)
Translates to: LFTVTFSLALVHTARLCEACDVL*SMLGGR
Trigger: CCTCCCGCCTAGCATGCTTCATAGAACGTCGCAAGC...TTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp GGCAGGCTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGGAGAACTGCACGGAGTaGAATGATGAACAGAATTAT +
Preference number: 4 (lower is better)
Translates to: GRLSFQNNSELPVNLRGAENCTE*NDEQNY
Trigger: ATAATTCTGTTCATCATTTCACTCCGTGCAGTTCTC...CGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAGCCTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp CCCAGGATCATCATCATCTGGGATTCCTTGTTATTTCCAACTTGCTGTGGAGAATTCTGCCCTCCCAAGTaGAGAAAGTGGTTGTTGGGT +
Preference number: 4 (lower is better)
Translates to: PRIIIIWDSLLFPTCCGEFCPPK*RKWLLG
Trigger: ACCCAACAACCACTTTCTTCACTTGGGAGGGCAGAA...TTCTCCACAGCAAGTTGGAAATAACAAGGAATCCCAGATGATGATGATCCTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR TCA 90 bp AGCAGAAACTCAACTTGTTATAAAAACTCAGAATGGCTCAGCAGGGGGATCTTGATAAGGCCCTTTGTCTaGATGGCCAGTGAAGCCCAC +
Preference number: 4 (lower is better)
Translates to: SRNSTCYKNSEWLSRGILIRPFV*MASEAH
Trigger: GTGGGCTTCACTGGCCATTCAGACAAAGGGCCTTAT...CAAGATCCCCCTGCTGAGCCATTCTGAGTTTTTATAACAAGTTGAGTTTCTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR GCA 90 bp TCTGTTAGGGTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAAAGGCGCGAGAGCAGGTaGACGGCGCTGTTGAAGAAC +
Preference number: 4 (lower is better)
Translates to: SVRVMYQVLFHGFKKDLERRESR*TALLKN
Trigger: GTTCTTCAACAGCGCCGTGCACCTGCTCTCGCGCCT...TTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCACCCTAACAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp TCTGTTAGGGTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACAGCACTGCCCGGGATaGAGTTGCGTCCTGAGAAGC +
Preference number: 4 (lower is better)
Translates to: SVRVMYQVLFHGFKKDLEQHCPG*SCVLRS
Trigger: GCTTCTCAGGACGCAACTGCATCCCGGGCAGTGCTG...TTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCACCCTAACAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp TTATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAATCTGGAAGTCAGCACTaGCCGGGATGCAGTTGCGTC +
Preference number: 4 (lower is better)
Translates to: LFTVTFSLALVHTARLCESGSQH*PGCSCV
Trigger: GACGCAACTGCATCCCGGGCAGTGCTGACTTCCAGA...TTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp CAGCAATTCTCAGTCATGCAAATGCCCGTGTTAAAGTTCTCCATTGGATTTAAAACATGGCGAGGATGGTaGTGCGTTCATCCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: QQFSVMQMPVLKFSIGFKTWRGW*CVHPGQ
Trigger: CTGCCCTGGATGAACGCAGCACCATCCTCGCCATGT...TTTAAATCCAATGGAGAACTTTAACACGGGCATTTGCATGACTGAGAATTGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp GTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACCAGGCCTTCTTCACTGCACATCTTaGACCAGGCATCCACTCCCG +
Preference number: 4 (lower is better)
Translates to: VMYQVLFHGFKKDLEPGLLHCTS*TRHPLP
Trigger: CGGGAGTGGATGCCTGGTGCAAGATGTGCAGTGAAG...AAGGCCTGGTTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp GATAAAGAAACCGAAGCTCACACAAGACCACAAAGCAAGATTTTGCTGAGTCAAACCTGCTGTACATCCTaGTGGAAGACGCAGAGCTGC +
Preference number: 4 (lower is better)
Translates to: DKETEAHTRPQSKILLSQTCCTS*WKTQSC
Trigger: GCAGCTCTGCGTCTTCCAGCAGGATGTACAGCAGGT...TTGACTCAGCAAAATCTTGCTTTGTGGTCTTGTGTGAGCTTCGGTTTCTTTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439170.2
CDS-3UTR GCA 90 bp TATACACCAGAAAGCAGCATTGGCCTCAAAGTACAATTAGTCCTTTTAGTTCAGTCATCATGCCTCTTCTaGAGGGCCCGGGCTCGATGT +
Preference number: 4 (lower is better)
Translates to: YTPESSIGLKVQLVLLVQSSCLF*RARARC
Trigger: ACATCGAGCCCGGGCCCTGCAGAAGAGGCATGATGA...CTGAACTAAAAGGACTAATTGTACTTTGAGGCCAATGCTGCTTTCTGGTGTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp TATACACCAGAAAGCAGCATTGGCCTCAAAGTACAATTAGTCCTTTTAGTTCAGGCACGAAGTCTTGGATaGGCACCTCCAGGTGTCGAG +
Preference number: 4 (lower is better)
Translates to: YTPESSIGLKVQLVLLVQARSLG*APPGVE
Trigger: CTCGACACCTGGAGGTGCGCATCCAAGACTTCGTGC...CTGAACTAAAAGGACTAATTGTACTTTGAGGCCAATGCTGCTTTCTGGTGTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp CATTTTAGACTTTGGAGAGAAGCTCAGCAACCTCGAATTGCACCCAGTAGAGAATGCTGCTGCTGGAACTaGTTGATCAGTTCCTGGACT +
Preference number: 4 (lower is better)
Translates to: HFRLWREAQQPRIAPSRECCCWN*LISSWT
Trigger: AGTCCAGGAACTGATCAAGCAGTTCCAGCAGCAGCA...TTCTCTACTGGGTGCAATTCGAGGTTGCTGAGCTTCTCTCCAAAGTCTAAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp CTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTCATTGCTGCTGCTGGAACTaGTTGATCAGTTCCTGGACT +
Preference number: 4 (lower is better)
Translates to: LSFQNNSELPVNLRGAFHCCCWN*LISSWT
Trigger: AGTCCAGGAACTGATCAAGCAGTTCCAGCAGCAGCA...ATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp ACAGATAAAGAAACCGAAGCTCACACAAGACCACAAAGCAAGATTTTGCTGAGTGTGGCGGTCTGCTGCTaGTGGAACTGCTTGATCAGT +
Preference number: 4 (lower is better)
Translates to: TDKETEAHTRPQSKILLSVAVCC*WNCLIS
Trigger: ACTGATCAAGCAGTTCCAGCAGCAGCAGACCGCCAC...ACTCAGCAAAATCTTGCTTTGTGGTCTTGTGTGAGCTTCGGTTTCTTTATCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439170.2
CDS-3UTR GCA 90 bp ACAGATAAAGAAACCGAAGCTCACACAAGACCACAAAGCAAGATTTTGCTGAGTAGAGTGGCGGTCTGCTaGTGCTGGAACTGCTTGATC +
Preference number: 4 (lower is better)
Translates to: TDKETEAHTRPQSKILLSRVAVC*CWNCLI
Trigger: GATCAAGCAGTTCCAGCAGCAGCAGACCGCCACTCT...ACTCAGCAAAATCTTGCTTTGTGGTCTTGTGTGAGCTTCGGTTTCTTTATCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439170.2
CDS-3UTR GCA 90 bp GATAAAGAAACCGAAGCTCACACAAGACCACAAAGCAAGATTTTGCTGAGTCAATCTAGAGTGGCGGTCTaGTGCTGCTGGAACTGCTTG +
Preference number: 4 (lower is better)
Translates to: DKETEAHTRPQSKILLSQSRVAV*CCWNCL
Trigger: CAAGCAGTTCCAGCAGCAGCAGACCGCCACTCTAGA...TTGACTCAGCAAAATCTTGCTTTGTGGTCTTGTGTGAGCTTCGGTTTCTTTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439170.2
CDS-3UTR GCA 90 bp CTGACGAGGTTTAAGAGGTACATCTCTCAATTCAGAGAACTGCACGGAGTGAAATGCAGATCCTGTCCCTaGTGGATAACCTCAAAGGTC +
Preference number: 4 (lower is better)
Translates to: LTRFKRYISQFRELHGVKCRSCP*WITSKV
Trigger: GACCTTTGAGGTTATCCAGCAGGGACAGGATCTGCA...TTTCACTCCGTGCAGTTCTCTGAATTGAGAGATGTACCTCTTAAACCTCGTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp CTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTCATGCATTGACTCTCCATTaGGGATCCATCCCAGAACCT +
Preference number: 4 (lower is better)
Translates to: LSFQNNSELPVNLRGAFHALTLH*GSIPEP
Trigger: AGGTTCTGGGATGGATCCGCAATGGAGAGTCAATGC...ATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp GCCAGTGTTTGGGAAAGGCTAAAGTTAACCCTCATCTTCTCTACCACACATCATGCATTGACTCTCCATTaGGGATCCATCCCAGAACCT +
Preference number: 4 (lower is better)
Translates to: ASVWERLKLTLIFSTTHHALTLH*GSIPEP
Trigger: AGGTTCTGGGATGGATCCGCAATGGAGAGTCAATGC...ATGATGTGTGGTAGAGAAGATGAGGGTTAACTTTAGCCTTTCCCAAACACTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp TCTGTTAGGGTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAAATGGCCAGTTGGAACTaGTCGTGCTCCCGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: SVRVMYQVLFHGFKKDLEMASWN*SCSRCS
Trigger: GCTGCAGCGGGAGCACGAGCAGTTCCAACTGGCCAT...TTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCACCCTAACAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp TATACACCAGAAAGCAGCATTGGCCTCAAAGTACAATTAGTCCTTTTAGTTCAGGCTTTCTGCTGTACCTaGAGGGCACTCTGGTGCGTC +
Preference number: 4 (lower is better)
Translates to: YTPESSIGLKVQLVLLVQAFCCT*RALWCV
Trigger: GACGCACCAGAGTGCCCTGCAGGTACAGCAGAAAGC...CTGAACTAAAAGGACTAATTGTACTTTGAGGCCAATGCTGCTTTCTGGTGTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp TTATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAAGCACCTCGGCTTTCTaGTGTACCTGCAGGGCACTC +
Preference number: 4 (lower is better)
Translates to: LFTVTFSLALVHTARLCESTSAF*CTCRAL
Trigger: GAGTGCCCTGCAGGTACAGCAGAAAGCCGAGGTGCT...TTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp TTATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAATTCAGCATGAGCTGCTaGCAGTGGAGGGCCACCTTC +
Preference number: 4 (lower is better)
Translates to: LFTVTFSLALVHTARLCEFSMSC*QWRATF
Trigger: GAAGGTGGCCCTCCACTGGCAGCAGCTCATGCTGAA...TTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp TACAAAGACAGTCCTTTCCTGAGCCAGGTGCAATTCCAGAGAATGACACTTTGCTCTCTCCGGTATTCTTaGTCTAAGCTCTCCAGGACA +
Preference number: 4 (lower is better)
Translates to: YKDSPFLSQVQFQRMTLCSLRYS*SKLSRT
Trigger: TGTCCTGGAGAGCTTAGAGCAAGAATACCGGAGAGA...GCAAAGTGTCATTCTCTGGAATTGCACCTGGCTCAGGAAAGGACTGTCTTTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp CTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTCATTTCAAGGTCCAGAAATaGAGCACGCGATTCTCCCTC +
Preference number: 4 (lower is better)
Translates to: LSFQNNSELPVNLRGAFHFKVQK*STRFSL
Trigger: GAGGGAGAATCGCGTGCTGCATTTCTGGACCTTGAA...ATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp CATTTTAGACTTTGGAGAGAAGCTCAGCAACCTCGAATTGCACCCAGTAGAGAATTCAAGGTCCAGAAATaGAGCACGCGATTCTCCCTC +
Preference number: 4 (lower is better)
Translates to: HFRLWREAQQPRIAPSREFKVQK*STRFSL
Trigger: GAGGGAGAATCGCGTGCTGCATTTCTGGACCTTGAA...TTCTCTACTGGGTGCAATTCGAGGTTGCTGAGCTTCTCTCCAAAGTCTAAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp CTGACGAGGTTTAAGAGGTACATCTCTCAATTCAGAGAACTGCACGGAGTGAAACCGATCCGAAAGGCTTaGTGGGATAATATCCAGCTC +
Preference number: 4 (lower is better)
Translates to: LTRFKRYISQFRELHGVKPIRKA*WDNIQL
Trigger: GAGCTGGATATTATCCCAGCAAGCCTTTCGGATCGG...TTTCACTCCGTGCAGTTCTCTGAATTGAGAGATGTACCTCTTAAACCTCGTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp CTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTCATACATCCTCAGGCAGTTaGTCGTACTTCTCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: LSFQNNSELPVNLRGAFHTSSGS*SYFSSS
Trigger: AGAGCTGGAGAAGTACGAGCAACTGCCTGAGGATGT...ATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp TCTGTTAGGGTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAATGGTGTCTGGTTGGCTaGTCCCATCCCCCTGGCTGT +
Preference number: 4 (lower is better)
Translates to: SVRVMYQVLFHGFKKDLEWCLVG*SHPPGC
Trigger: ACAGCCAGGGGGATGGGAGCAGCCAACCAGACACCA...TTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCACCCTAACAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp AAACTCTGTGTTTGGGGTTGGGGCTCTCTCTTGAGTGTGTTGGAAACTGGAGGACAGAGAATGACACTTTaGATTGAGAGCACGATTCCT +
Preference number: 4 (lower is better)
Translates to: KLCVWGWGSLLSVLETGGQRMTL*IESTIP
Trigger: AGGAATCGTGCTCTCAATGCAAAGTGTCATTCTCTG...TCCTCCAGTTTCCAACACACTCAAGAGAGAGCCCCAACCCCAAACACAGAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp ATTCAGGTCATCCACAGTGGACAGAACAGAACTTGCCAAGCTGGACTTTATGGATTTGATGTTTCCATCTaGCTTCCCGCTGTTAAGCCG +
Preference number: 4 (lower is better)
Translates to: IQVIHSGQNRTCQAGLYGFDVSI*LPAVKP
Trigger: CGGCTTAACAGCGGGAAGGCAGATGGAAACATCAAA...TCCATAAAGTCCAGCTTGGCAAGTTCTGTTCTGTCCACTGTGGATGACCTGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR GCA 90 bp TTATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAATGGTCCGGGACTGCATaGCTGCATCCAGCTCGATCA +
Preference number: 4 (lower is better)
Translates to: LFTVTFSLALVHTARLCEWSGTA*LHPARS
Trigger: TGATCGAGCTGGATGCAGGCATGCAGTCCCGGACCA...TTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp TATACACCAGAAAGCAGCATTGGCCTCAAAGTACAATTAGTCCTTTTAGTTCAGTGGACGAGGTCCCATTaGAGCCTCCCAGGTCGTTCT +
Preference number: 4 (lower is better)
Translates to: YTPESSIGLKVQLVLLVQWTRSH*SLPGRS
Trigger: AGAACGACCTGGGAGGCTGCAATGGGACCTCGTCCA...CTGAACTAAAAGGACTAATTGTACTTTGAGGCCAATGCTGCTTTCTGGTGTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp AGCAGAAACTCAACTTGTTATAAAAACTCAGAATGGCTCAGCAGGGGGATCTTGGCCGCCCACAGACTTTaGACTGCAGTATCACTGTGT +
Preference number: 4 (lower is better)
Translates to: SRNSTCYKNSEWLSRGILAAHRL*TAVSLC
Trigger: ACACAGTGATACTGCAGTGCAAAGTCTGTGGGCGGC...CAAGATCCCCCTGCTGAGCCATTCTGAGTTTTTATAACAAGTTGAGTTTCTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR GCA 90 bp GTAAAAGCTGATATGAAAGCTTGGGGTCTGTCTAACATTCTGTCAACTGCCCCCTACATGTCTCCTCTTTaGTCTCATCCAAGAAGGGGG +
Preference number: 4 (lower is better)
Translates to: VKADMKAWGLSNILSTAPYMSPL*SHPRRG
Trigger: CCCCCTTCTTGGATGAGAGCAAAGAGGAGACATGTA...GGGGGCAGTTGACAGAATGTTAGACAGACCCCAAGCTTTCATATCAGCTTTTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR GCA 90 bp TATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAAGGCTGCAGCCATGGATaGTGCAAGCATGTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: YLQSHSVLLWFTLHVYVKGCSHG*CKHVAA
Trigger: AGCAGCCACATGCTTGCAGCATCCATGGCTGCAGCC...TTTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp GTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACCAGGCCTTCTGCCATTATGGGGCTaGAGCCATGGATGCTGCAAG +
Preference number: 4 (lower is better)
Translates to: VMYQVLFHGFKKDLEPGLLPLWG*SHGCCK
Trigger: CTTGCAGCATCCATGGCTGCAGCCCCATAATGGCAG...AAGGCCTGGTTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp GGCAGGCTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTCAAAAGGGCAACATTaGTTTCTCTTAATGCACAGG +
Preference number: 4 (lower is better)
Translates to: GRLSFQNNSELPVNLRGASKGQH*FLLMHR
Trigger: CCTGTGCATTAAGAGAAAGCAATGTTGCCCTTTTGA...CGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAGCCTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp TCTGTTAGGGTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAAAGCAGCTCTACCGTCTaGCCCACCTGGATGGTCAGC +
Preference number: 4 (lower is better)
Translates to: SVRVMYQVLFHGFKKDLESSSTV*PTWMVS
Trigger: GCTGACCATCCAGGTGGGGCAGACGGTAGAGCTGCT...TTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCACCCTAACAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp TATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAAAACTCCTCCGTCAGCTaGGAGGGGTCCACCAGCTTT +
Preference number: 4 (lower is better)
Translates to: YLQSHSVLLWFTLHVYVKNSSVS*EGSTSF
Trigger: AAAGCTGGTGGACCCCTCCCAGCTGACGGAGGAGTT...TTTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp TATACACCAGAAAGCAGCATTGGCCTCAAAGTACAATTAGTCCTTTTAGTTCAGCAGACATGGCGAGGATaGTGCTGCGTTCATCCAGGG +
Preference number: 4 (lower is better)
Translates to: YTPESSIGLKVQLVLLVQQTWRG*CCVHPG
Trigger: CCCTGGATGAACGCAGCACCATCCTCGCCATGTCTG...CTGAACTAAAAGGACTAATTGTACTTTGAGGCCAATGCTGCTTTCTGGTGTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp GTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACCAGGCCTTGGAACACAGCAGACATaGCGAGGATGGTGCTGCGTT +
Preference number: 4 (lower is better)
Translates to: VMYQVLFHGFKKDLEPGLGTQQT*RGWCCV
Trigger: AACGCAGCACCATCCTCGCCATGTCTGCTGTGTTCC...AAGGCCTGGTTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp CATTTTAGACTTTGGAGAGAAGCTCAGCAACCTCGAATTGCACCCAGTAGAGAAAACTGCTCAGCCTTCTaGTGGAACACAGCAGACATG +
Preference number: 4 (lower is better)
Translates to: HFRLWREAQQPRIAPSRENCSAF*WNTADM
Trigger: CATGTCTGCTGTGTTCCACCAGAAGGCTGAGCAGTT...TTCTCTACTGGGTGCAATTCGAGGTTGCTGAGCTTCTCTCCAAAGTCTAAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp CTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTCATAACTGCTCAGCCTTCTaGTGGAACACAGCAGACATG +
Preference number: 4 (lower is better)
Translates to: LSFQNNSELPVNLRGAFHNCSAF*WNTADM
Trigger: CATGTCTGCTGTGTTCCACCAGAAGGCTGAGCAGTT...ATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp GCCAGTGTTTGGGAAAGGCTAAAGTTAACCCTCATCTTCTCTACCACACATCATAACTGCTCAGCCTTCTaGTGGAACACAGCAGACATG +
Preference number: 4 (lower is better)
Translates to: ASVWERLKLTLIFSTTHHNCSAF*WNTADM
Trigger: CATGTCTGCTGTGTTCCACCAGAAGGCTGAGCAGTT...ATGATGTGTGGTAGAGAAGATGAGGGTTAACTTTAGCCTTTCCCAAACACTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp GATAAAGAAACCGAAGCTCACACAAGACCACAAAGCAAGATTTTGCTGAGTCAATGCTGTACATCCTGCTaGAAGACGCAGAGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: DKETEAHTRPQSKILLSQCCTSC*KTQSCS
Trigger: GCTGCAGCTCTGCGTCTTCCAGCAGGATGTACAGCA...TTGACTCAGCAAAATCTTGCTTTGTGGTCTTGTGTGAGCTTCGGTTTCTTTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439170.2
CDS-3UTR CCA 90 bp CTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTCATGGAGCTTGTCCGCATTaGTGTACGTATTCTGAGCCA +
Preference number: 4 (lower is better)
Translates to: LSFQNNSELPVNLRGAFHGACPH*CTYSEP
Trigger: TGGCTCAGAATACGTACACCAATGCGGACAAGCTCC...ATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp GTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACCAGGCCTTGCGGTCTGCTGCTGCTaGAACTGCTTGATCAGTTCC +
Preference number: 4 (lower is better)
Translates to: VMYQVLFHGFKKDLEPGLAVCCC*NCLISS
Trigger: GGAACTGATCAAGCAGTTCCAGCAGCAGCAGACCGC...AAGGCCTGGTTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp GATAAAGAAACCGAAGCTCACACAAGACCACAAAGCAAGATTTTGCTGAGTCAAGCGGTCTGCTGCTGCTaGAACTGCTTGATCAGTTCC +
Preference number: 4 (lower is better)
Translates to: DKETEAHTRPQSKILLSQAVCCC*NCLISS
Trigger: GGAACTGATCAAGCAGTTCCAGCAGCAGCAGACCGC...TTGACTCAGCAAAATCTTGCTTTGTGGTCTTGTGTGAGCTTCGGTTTCTTTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439170.2
CDS-3UTR CCA 90 bp GTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACCAGGCCTTGGGGTGTTTTGTTGTTaGACACAGCCGAGTCCCTGG +
Preference number: 4 (lower is better)
Translates to: VMYQVLFHGFKKDLEPGLGVFCC*TQPSPW
Trigger: CCAGGGACTCGGCTGTGTCCAACAACAAAACACCCC...AAGGCCTGGTTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp GCCAGTGTTTGGGAAAGGCTAAAGTTAACCCTCATCTTCTCTACCACACATCATCTGCTGTCACCTCGATaGTGTACTGCTCAAAGATGC +
Preference number: 4 (lower is better)
Translates to: ASVWERLKLTLIFSTTHHLLSPR*CTAQRC
Trigger: GCATCTTTGAGCAGTACACCATCGAGGTGACAGCAG...ATGATGTGTGGTAGAGAAGATGAGGGTTAACTTTAGCCTTTCCCAAACACTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp TATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAAAGCTTCCGTTCTGTGTaGCGCTGCAGCCGCTGTTCT +
Preference number: 4 (lower is better)
Translates to: YLQSHSVLLWFTLHVYVKSFRSV*RCSRCS
Trigger: AGAACAGCGGCTGCAGCGCCACACAGAACGGAAGCT...TTTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp TACAAAGACAGTCCTTTCCTGAGCCAGGTGCAATTCCAGAGAATGACACTTTGCAGATCCTGTCCCTGCTaGATAACCTCAAAGGTCATG +
Preference number: 4 (lower is better)
Translates to: YKDSPFLSQVQFQRMTLCRSCPC*ITSKVM
Trigger: CATGACCTTTGAGGTTATCCAGCAGGGACAGGATCT...GCAAAGTGTCATTCTCTGGAATTGCACCTGGCTCAGGAAAGGACTGTCTTTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp CAGCAATTCTCAGTCATGCAAATGCCCGTGTTAAAGTTCTCCATTGGATTTAAAGTCGATCTCTGCTGCTaGCCCCAGCTTATCTCGTCC +
Preference number: 4 (lower is better)
Translates to: QQFSVMQMPVLKFSIGFKVDLCC*PQLISS
Trigger: GGACGAGATAAGCTGGGGCCAGCAGCAGAGATCGAC...TTTAAATCCAATGGAGAACTTTAACACGGGCATTTGCATGACTGAGAATTGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp CTGACGAGGTTTAAGAGGTACATCTCTCAATTCAGAGAACTGCACGGAGTGAAACTGTGGTCTCTCCAGTaGAGGTATGTGTTGAGAGGT +
Preference number: 4 (lower is better)
Translates to: LTRFKRYISQFRELHGVKLWSLQ*RYVLRG
Trigger: ACCTCTCAACACATACCTCCACTGGAGAGACCACAG...TTTCACTCCGTGCAGTTCTCTGAATTGAGAGATGTACCTCTTAAACCTCGTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp GGCAGGCTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGATTTCCTTATCTCCGTaGCATGAATGTGGCCTTTTT +
Preference number: 4 (lower is better)
Translates to: GRLSFQNNSELPVNLRGAISLSP*HECGLF
Trigger: AAAAAGGCCACATTCATGCCACGGAGATAAGGAAAT...CGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAGCCTGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp TACAAAGACAGTCCTTTCCTGAGCCAGGTGCAATTCCAGAGAATGACACTTTGCAGTGCTTGTCCACCGTaGTCACCCATTTCCTTATCT +
Preference number: 4 (lower is better)
Translates to: YKDSPFLSQVQFQRMTLCSACPP*SPISLS
Trigger: AGATAAGGAAATGGGTGACCACGGTGGACAAGCACT...GCAAAGTGTCATTCTCTGGAATTGCACCTGGCTCAGGAAAGGACTGTCTTTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp CTGACGAGGTTTAAGAGGTACATCTCTCAATTCAGAGAACTGCACGGAGTGAAATTAGGTAGGAAGAGATaGAGTTGGCCAGACCATGCC +
Preference number: 4 (lower is better)
Translates to: LTRFKRYISQFRELHGVKLGRKR*SWPDHA
Trigger: GGCATGGTCTGGCCAACTCCATCTCTTCCTACCTAA...TTTCACTCCGTGCAGTTCTCTGAATTGAGAGATGTACCTCTTAAACCTCGTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp CATTTTAGACTTTGGAGAGAAGCTCAGCAACCTCGAATTGCACCCAGTAGAGAAGTTCCTCTGTTTGGCTaGTGTTTTGGGGAGCTGAAG +
Preference number: 4 (lower is better)
Translates to: HFRLWREAQQPRIAPSREVPLFG*CFGELK
Trigger: CTTCAGCTCCCCAAAACACCAGCCAAACAGAGGAAC...TTCTCTACTGGGTGCAATTCGAGGTTGCTGAGCTTCTCTCCAAAGTCTAAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp CTGACGAGGTTTAAGAGGTACATCTCTCAATTCAGAGAACTGCACGGAGTGAAAGTTCCTCTGTTTGGCTaGTGTTTTGGGGAGCTGAAG +
Preference number: 4 (lower is better)
Translates to: LTRFKRYISQFRELHGVKVPLFG*CFGELK
Trigger: CTTCAGCTCCCCAAAACACCAGCCAAACAGAGGAAC...TTTCACTCCGTGCAGTTCTCTGAATTGAGAGATGTACCTCTTAAACCTCGTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp CATTTTAGACTTTGGAGAGAAGCTCAGCAACCTCGAATTGCACCCAGTAGAGAACGCGCTAAACGTAAGTaGAGAAAGGATCTCCAGGTC +
Preference number: 4 (lower is better)
Translates to: HFRLWREAQQPRIAPSRERAKRK*RKDLQV
Trigger: GACCTGGAGATCCTTTCTCCACTTACGTTTAGCGCG...TTCTCTACTGGGTGCAATTCGAGGTTGCTGAGCTTCTCTCCAAAGTCTAAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp GCCAGTGTTTGGGAAAGGCTAAAGTTAACCCTCATCTTCTCTACCACACATCATAAGTCTCAAGAGAGGTaGGTGATTGGAGTCCTGGTG +
Preference number: 4 (lower is better)
Translates to: ASVWERLKLTLIFSTTHHKSQER*VIGVLV
Trigger: CACCAGGACTCCAATCACCCACCTCTCTTGAGACTT...ATGATGTGTGGTAGAGAAGATGAGGGTTAACTTTAGCCTTTCCCAAACACTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp AAACTCTGTGTTTGGGGTTGGGGCTCTCTCTTGAGTGTGTTGGAAACTGGAGGAGTTGTTGCCAGTGTTTaGGAAAGGCTAAAGTTAACC +
Preference number: 4 (lower is better)
Translates to: KLCVWGWGSLLSVLETGGVVASV*ERLKLT
Trigger: GGTTAACTTTAGCCTTTCCCAAACACTGGCAACAAC...TCCTCCAGTTTCCAACACACTCAAGAGAGAGCCCCAACCCCAAACACAGAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp CATTTTAGACTTTGGAGAGAAGCTCAGCAACCTCGAATTGCACCCAGTAGAGAACTCTGCCTCTTGCCTTaGTGTGGGGTTTCCATGAAA +
Preference number: 4 (lower is better)
Translates to: HFRLWREAQQPRIAPSRELCLLP*CGVSMK
Trigger: TTTCATGGAAACCCCACACCAAGGCAAGAGGCAGAG...TTCTCTACTGGGTGCAATTCGAGGTTGCTGAGCTTCTCTCCAAAGTCTAAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp TCTGTTAGGGTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAAACACGCGCCTCTCTTTaGTCCGGGACTGCATGCCTG +
Preference number: 4 (lower is better)
Translates to: SVRVMYQVLFHGFKKDLETRASL*SGTACL
Trigger: CAGGCATGCAGTCCCGGACCAAAGAGAGGCGCGTGT...TTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCACCCTAACAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp AAGGAAGAAGGTCTACATTCCTCGAAACTCATCCAGCACAATTCATTGACCATAAGACACATGTTCTGCTaGTTGACGGCGAGGACCTGG +
Preference number: 4 (lower is better)
Translates to: KEEGLHSSKLIQHNSLTIRHMFC*LTARTW
Trigger: CCAGGTCCTCGCCGTCAACCAGCAGAACATGTGTCT...TATGGTCAATGAATTGTGCTGGATGAGTTTCGAGGAATGTAGACCTTCTTCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR CCA 90 bp GTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACCAGGCCTTTGGTCGCTGGCAGGCTaGTACACCAGACACATGTTC +
Preference number: 4 (lower is better)
Translates to: VMYQVLFHGFKKDLEPGLWSLAG*YTRHMF
Trigger: GAACATGTGTCTGGTGTACCAGCCTGCCAGCGACCA...AAGGCCTGGTTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp TCAGGTCATCCACAGTGGACAGAACAGAACTTGCCAAGCTGGACTTTATGGATAGTTTACGAGGCCCTGTaGCTTCATTTTTACCCGTGT +
Preference number: 4 (lower is better)
Translates to: SGHPQWTEQNLPSWTLWIVYEAL*LHFYPC
Trigger: ACACGGGTAAAAATGAAGCCACAGGGCCTCGTAAAC...TATCCATAAAGTCCAGCTTGGCAAGTTCTGTTCTGTCCACTGTGGATGACCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR CCA 90 bp AGCAGAAACTCAACTTGTTATAAAAACTCAGAATGGCTCAGCAGGGGGATCTTGTGCCCAGAATATCCTTaGGTTTACGAGGCCCTGTGG +
Preference number: 4 (lower is better)
Translates to: SRNSTCYKNSEWLSRGILCPEYP*VYEALW
Trigger: CCACAGGGCCTCGTAAACCCAAGGATATTCTGGGCA...CAAGATCCCCCTGCTGAGCCATTCTGAGTTTTTATAACAAGTTGAGTTTCTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR CCA 90 bp CTGACGAGGTTTAAGAGGTACATCTCTCAATTCAGAGAACTGCACGGAGTGAAAGTGTCAAGGATGTTCTaGTCTGGACCCTTCCAAGTG +
Preference number: 4 (lower is better)
Translates to: LTRFKRYISQFRELHGVKVSRMF*SGPFQV
Trigger: CACTTGGAAGGGTCCAGACCAGAACATCCTTGACAC...TTTCACTCCGTGCAGTTCTCTGAATTGAGAGATGTACCTCTTAAACCTCGTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp GTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACCAGGCCTTGCGGTTAGGGGCTGCTaGAACACCTTGCACTTTGAC +
Preference number: 4 (lower is better)
Translates to: VMYQVLFHGFKKDLEPGLAVRGC*NTLHFD
Trigger: GTCAAAGTGCAAGGTGTTCCAGCAGCCCCTAACCGC...AAGGCCTGGTTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp CTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTCATGCCTTGAATGACTTCTaGGGCAGCAAACTCAGGGTT +
Preference number: 4 (lower is better)
Translates to: LSFQNNSELPVNLRGAFHALNDF*GSKLRV
Trigger: AACCCTGAGTTTGCTGCCCCAGAAGTCATTCAAGGC...ATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp GTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACCAGGCCTTAGCATGTGGCTGCTGTaGGCCGCCTCCGAAAATCTT +
Preference number: 4 (lower is better)
Translates to: VMYQVLFHGFKKDLEPGLSMWLL*AASENL
Trigger: AAGATTTTCGGAGGCGGCCCACAGCAGCCACATGCT...AAGGCCTGGTTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp ATGTGCGATGGTCCCTATGGGGAAACCTGTCCACTTATGAATAAGGCCCTTTGTATCTATAATCTTGGATaGGATGAGGTGGAGGGCGAA +
Preference number: 4 (lower is better)
Translates to: MCDGPYGETCPLMNKALCIYNLG*DEVEGE
Trigger: TTCGCCCTCCACCTCATCCCATCCAAGATTATAGAT...ACAAAGGGCCTTATTCATAAGTGGACAGGTTTCCCCATAGGGACCATCGCACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR CCA 90 bp CCCAGGATCATCATCATCTGGGATTCCTTGTTATTTCCAACTTGCTGTGGAGAACATTGTTCTGGGCCCTaGCCTTCTCAAGCAGAAACT +
Preference number: 4 (lower is better)
Translates to: PRIIIIWDSLLFPTCCGEHCSGP*PSQAET
Trigger: AGTTTCTGCTTGAGAAGGCCAGGGCCCAGAACAATG...TTCTCCACAGCAAGTTGGAAATAACAAGGAATCCCAGATGATGATGATCCTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR CCA 90 bp TCTGTTAGGGTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAAGTCAGCTCACTGCTGTaGCCCGCACTGAAGTCCTGG +
Preference number: 4 (lower is better)
Translates to: SVRVMYQVLFHGFKKDLEVSSLL*PALKSW
Trigger: CCAGGACTTCAGTGCGGGCCACAGCAGTGAGCTGAC...TTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCACCCTAACAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp TCTGTTAGGGTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAATCTGCCCCACCTGGATaGTCAGCTCACTGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: SVRVMYQVLFHGFKKDLESAPPG*SAHCCG
Trigger: GCCACAGCAGTGAGCTGACCATCCAGGTGGGGCAGA...TTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCACCCTAACAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
3UTR CAA 72 bp AGAAGAGTGGGTTTGCTCCCATGCTGCAGAAGGCATTaGCAGGACAGAATTCCCAGCTCTATTCTAGAATCA +
Preference number: 4 (lower is better)
Translates to: RRVGLLPCCRRH*QDRIPSSILES
Trigger: TGATTCTAGAATAGAGCTGGGAATTCTGTCCTGCAAATGCCTTCTGCAGCATGGGAGCAAACCCACTCTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483658.1
CDS-3UTR TCA 90 bp GTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACCAGGCCTTCTCCAGTGTGTTTGCTaGGAAAGGCCTCACCATGGT +
Preference number: 4 (lower is better)
Translates to: VMYQVLFHGFKKDLEPGLLQCVC*ERPHHG
Trigger: ACCATGGTGAGGCCTTTCTCAGCAAACACACTGGAG...AAGGCCTGGTTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp GATAAAGAAACCGAAGCTCACACAAGACCACAAAGCAAGATTTTGCTGAGTCAACTCCAGTGTGTTTGCTaGGAAAGGCCTCACCATGGT +
Preference number: 4 (lower is better)
Translates to: DKETEAHTRPQSKILLSQLQCVC*ERPHHG
Trigger: ACCATGGTGAGGCCTTTCTCAGCAAACACACTGGAG...TTGACTCAGCAAAATCTTGCTTTGTGGTCTTGTGTGAGCTTCGGTTTCTTTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439170.2
CDS-3UTR TCA 90 bp TTATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAATGCCTGGACCTCCGTaGTGTACTGGTGCAGATCCT +
Preference number: 4 (lower is better)
Translates to: LFTVTFSLALVHTARLCEMPGPP*CTGADP
Trigger: AGGATCTGCACCAGTACATCACGGAGGTCCAGGCAT...TTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp TATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAAATGCCTGGACCTCCGTaGTGTACTGGTGCAGATCCT +
Preference number: 4 (lower is better)
Translates to: YLQSHSVLLWFTLHVYVKMPGPP*CTGADP
Trigger: AGGATCTGCACCAGTACATCACGGAGGTCCAGGCAT...TTTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp GTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACCAGGCCTTATCCCAGAACCTGTTTaGCTTCAGCCTGGAGGTGAC +
Preference number: 4 (lower is better)
Translates to: VMYQVLFHGFKKDLEPGLIPEPV*LQPGGD
Trigger: GTCACCTCCAGGCTGAAGTCAAACAGGTTCTGGGAT...AAGGCCTGGTTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp CTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTCATTCCTGTGGATGTACTTaGGAAACACCTCAGCATTCC +
Preference number: 4 (lower is better)
Translates to: LSFQNNSELPVNLRGAFHSCGCT*ETPQHS
Trigger: GGAATGCTGAGGTGTTTCTCAAGTACATCCACAGGA...ATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp CATTTTAGACTTTGGAGAGAAGCTCAGCAACCTCGAATTGCACCCAGTAGAGAATCCTGTGGATGTACTTaGGAAACACCTCAGCATTCC +
Preference number: 4 (lower is better)
Translates to: HFRLWREAQQPRIAPSRESCGCT*ETPQHS
Trigger: GGAATGCTGAGGTGTTTCTCAAGTACATCCACAGGA...TTCTCTACTGGGTGCAATTCGAGGTTGCTGAGCTTCTCTCCAAAGTCTAAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR TCA 90 bp TTATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAACGACACTGGGCATGCTaGCGTTGTTCCTGTGGATGT +
Preference number: 4 (lower is better)
Translates to: LFTVTFSLALVHTARLCERHWAC*RCSCGC
Trigger: ACATCCACAGGAACAACGTCAGCATGCCCAGTGTCG...TTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp TATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAATCCGCTTCTCTTCATTaGCTTCGTGGTTGGCGTCCC +
Preference number: 4 (lower is better)
Translates to: YLQSHSVLLWFTLHVYVKSASLH*LRGWRP
Trigger: GGGACGCCAACCACGAAGTCAATGAAGAGAAGCGGA...TTTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp TCTGTTAGGGTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAATCAGCGCTGTCTCCCTaGGGGGTTGTTTCATCCCCA +
Preference number: 4 (lower is better)
Translates to: SVRVMYQVLFHGFKKDLESALSP*GVVSSP
Trigger: TGGGGATGAAACAACCCCTCAGGGAGACAGCGCTGA...TTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCACCCTAACAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp TCAGGTCATCCACAGTGGACAGAACAGAACTTGCCAAGCTGGACTTTATGGATACAATGCCCAGATCCTTaGCATAGTCTTTCTCTGTCT +
Preference number: 4 (lower is better)
Translates to: SGHPQWTEQNLPSWTLWIQCPDP*HSLSLS
Trigger: AGACAGAGAAAGACTATGTCAAGGATCTGGGCATTG...TATCCATAAAGTCCAGCTTGGCAAGTTCTGTTCTGTCCACTGTGGATGACCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR TCA 90 bp CTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTCATCTTCTATTCTCTTCATaGAGCCCTCCACCACAATGC +
Preference number: 4 (lower is better)
Translates to: LSFQNNSELPVNLRGAFHLLFSS*SPPPQC
Trigger: GCATTGTGGTGGAGGGCTTCATGAAGAGAATAGAAG...ATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp GCTCCCTCATATTCTCACAAATCTAAATTGCCATGCTCTTCCACAGAGGCAAGACTCCTTTCTTTCCGTTaGTACTCAATGGGCGATTGC +
Preference number: 4 (lower is better)
Translates to: APSYSHKSKLPCSSTEARLLSFR*YSMGDC
Trigger: GCAATCGCCCATTGAGTATCAACGGAAAGAAAGGAG...TCTTGCCTCTGTGGAAGAGCATGGCAATTTAGATTTGTGAGAATATGAGGGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR TCA 90 bp CTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTCATGAACACCTTGCACTTTaGCTGTTGCAGACGTTGATG +
Preference number: 4 (lower is better)
Translates to: LSFQNNSELPVNLRGAFHEHLAL*LLQTLM
Trigger: CATCAACGTCTGCAACAGTCAAAGTGCAAGGTGTTC...ATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp GGCAGGCTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTGCGGGTAGCTTTGTaGATGCATTTCTTTACTATA +
Preference number: 4 (lower is better)
Translates to: GRLSFQNNSELPVNLRGALRVAL*MHFFTI
Trigger: TATAGTAAAGAAATGCATTCACAAAGCTACCCGCAA...CGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAGCCTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp TCAGGTCATCCACAGTGGACAGAACAGAACTTGCCAAGCTGGACTTTATGGATAGAATCCGTAGGTCAATaGGCAGGTTTTCAGGCTTTA +
Preference number: 4 (lower is better)
Translates to: SGHPQWTEQNLPSWTLWIESVGQ*AGFQAL
Trigger: TAAAGCCTGAAAACCTGCTCATTGACCTACGGATTC...TATCCATAAAGTCCAGCTTGGCAAGTTCTGTTCTGTCCACTGTGGATGACCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR TCA 90 bp TCTGTTAGGGTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAAGAGACGGGGATGCCTTaGATGACTTCTGGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: SVRVMYQVLFHGFKKDLEETGMP*MTSGAA
Trigger: TGCTGCCCCAGAAGTCATTCAAGGCATCCCCGTCTC...TTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCACCCTAACAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp TCAGGTCATCCACAGTGGACAGAACAGAACTTGCCAAGCTGGACTTTATGGATAACCCTGAATAACCACTaGCGAGGTTTAAGAGGTACA +
Preference number: 4 (lower is better)
Translates to: SGHPQWTEQNLPSWTLWITLNNH*RGLRGT
Trigger: TGTACCTCTTAAACCTCGTCAGTGGTTATTCAGGGT...TATCCATAAAGTCCAGCTTGGCAAGTTCTGTTCTGTCCACTGTGGATGACCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR TCA 90 bp CTGACGAGGTTTAAGAGGTACATCTCTCAATTCAGAGAACTGCACGGAGTGAAACCCCTTGATTTAGGGTaGCTTTTACTGCTGCTCAGA +
Preference number: 4 (lower is better)
Translates to: LTRFKRYISQFRELHGVKPLDLG*LLLLLR
Trigger: TCTGAGCAGCAGTAAAAGTCACCCTAAATCAAGGGG...TTTCACTCCGTGCAGTTCTCTGAATTGAGAGATGTACCTCTTAAACCTCGTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp GTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACCAGGCCTTTCAGCGGCTGCATGGTaGCAGGTATTGCAATCTCAG +
Preference number: 4 (lower is better)
Translates to: VMYQVLFHGFKKDLEPGLSAAAW*QVLQSQ
Trigger: CTGAGATTGCAATACCTGTCACCATGCAGCCGCTGA...AAGGCCTGGTTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp AGCAGAAACTCAACTTGTTATAAAAACTCAGAATGGCTCAGCAGGGGGATCTTGAACAAGAGTGGCCCCTaGTCCTTTTTCCCTAAGCAC +
Preference number: 4 (lower is better)
Translates to: SRNSTCYKNSEWLSRGILNKSGP*SFFPKH
Trigger: GTGCTTAGGGAAAAAGGATCAGGGGCCACTCTTGTT...CAAGATCCCCCTGCTGAGCCATTCTGAGTTTTTATAACAAGTTGAGTTTCTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR TCA 90 bp GTAAAAGCTGATATGAAAGCTTGGGGTCTGTCTAACATTCTGTCAACTGCCCCCTGGCTGAGAGAGACCTaGAGGATATCTCCAACATTA +
Preference number: 4 (lower is better)
Translates to: VKADMKAWGLSNILSTAPWLRET*RISPTL
Trigger: TAATGTTGGAGATATCCTTCAGGTCTCTCTCAGCCA...GGGGGCAGTTGACAGAATGTTAGACAGACCCCAAGCTTTCATATCAGCTTTTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR GCA 90 bp CTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTCATAGCTGGGTGGAGATCTaGTTGATTTGTTGTGAGGCA +
Preference number: 4 (lower is better)
Translates to: LSFQNNSELPVNLRGAFHSWVEI*LICCEA
Trigger: TGCCTCACAACAAATCAAGCAGATCTCCACCCAGCT...ATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp TATACACCAGAAAGCAGCATTGGCCTCAAAGTACAATTAGTCCTTTTAGTTCAGCTTCACTGCACATCTTaGACCAGGCATCCACTCCCG +
Preference number: 4 (lower is better)
Translates to: YTPESSIGLKVQLVLLVQLHCTS*TRHPLP
Trigger: CGGGAGTGGATGCCTGGTGCAAGATGTGCAGTGAAG...CTGAACTAAAAGGACTAATTGTACTTTGAGGCCAATGCTGCTTTCTGGTGTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp TATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAAGCCAGCTCTAGGTCTTaGATCTCGGATGGCAGACCA +
Preference number: 4 (lower is better)
Translates to: YLQSHSVLLWFTLHVYVKASSRS*ISDGRP
Trigger: TGGTCTGCCATCCGAGATGCAAGACCTAGAGCTGGC...TTTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp TTATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAACCTGCTGTACATCCTaGTGGAAGACGCAGAGCTGC +
Preference number: 4 (lower is better)
Translates to: LFTVTFSLALVHTARLCETCCTS*WKTQSC
Trigger: GCAGCTCTGCGTCTTCCAGCAGGATGTACAGCAGGT...TTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp GTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACCAGGCCTTTCTTCAAAGTCATCATaGCTCTTCTGCAGGGCCCGG +
Preference number: 4 (lower is better)
Translates to: VMYQVLFHGFKKDLEPGLSSKSS*LFCRAR
Trigger: CCGGGCCCTGCAGAAGAGGCATGATGACTTTGAAGA...AAGGCCTGGTTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp GATAAAGAAACCGAAGCTCACACAAGACCACAAAGCAAGATTTTGCTGAGTCAATCTTCAAAGTCATCATaGCTCTTCTGCAGGGCCCGG +
Preference number: 4 (lower is better)
Translates to: DKETEAHTRPQSKILLSQSSKSS*LFCRAR
Trigger: CCGGGCCCTGCAGAAGAGGCATGATGACTTTGAAGA...TTGACTCAGCAAAATCTTGCTTTGTGGTCTTGTGTGAGCTTCGGTTTCTTTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439170.2
CDS-3UTR GCA 90 bp TCTGTTAGGGTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACTCCAGGTGTCGAGCTaGCTTGTAGATCTCCTCGGG +
Preference number: 4 (lower is better)
Translates to: SVRVMYQVLFHGFKKDLELQVSS*LVDLLG
Trigger: CCCGAGGAGATCTACAAGGCAGCTCGACACCTGGAG...TTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCACCCTAACAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp CTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTCATGATCAGTTCCTGGACTaGATCCACAGAATCTGCACA +
Preference number: 4 (lower is better)
Translates to: LSFQNNSELPVNLRGAFHDQFLD*IHRICT
Trigger: TGTGCAGATTCTGTGGATGCAGTCCAGGAACTGATC...ATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp TTATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAGTGGCGGTCTGCTGCTaGTGGAACTGCTTGATCAGT +
Preference number: 4 (lower is better)
Translates to: LFTVTFSLALVHTARLCEVAVCC*WNCLIS
Trigger: ACTGATCAAGCAGTTCCAGCAGCAGCAGACCGCCAC...TTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp CAGCAATTCTCAGTCATGCAAATGCCCGTGTTAAAGTTCTCCATTGGATTTAAAGTGGCGGTCTGCTGCTaGTGGAACTGCTTGATCAGT +
Preference number: 4 (lower is better)
Translates to: QQFSVMQMPVLKFSIGFKVAVCC*WNCLIS
Trigger: ACTGATCAAGCAGTTCCAGCAGCAGCAGACCGCCAC...TTTAAATCCAATGGAGAACTTTAACACGGGCATTTGCATGACTGAGAATTGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp TATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAAAGAGTGGCGGTCTGCTaGTGCTGGAACTGCTTGATC +
Preference number: 4 (lower is better)
Translates to: YLQSHSVLLWFTLHVYVKRVAVC*CWNCLI
Trigger: GATCAAGCAGTTCCAGCAGCAGCAGACCGCCACTCT...TTTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp TATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAATCTAGAGTGGCGGTCTaGTGCTGCTGGAACTGCTTG +
Preference number: 4 (lower is better)
Translates to: YLQSHSVLLWFTLHVYVKSRVAV*CCWNCL
Trigger: CAAGCAGTTCCAGCAGCAGCAGACCGCCACTCTAGA...TTTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp TATACACCAGAAAGCAGCATTGGCCTCAAAGTACAATTAGTCCTTTTAGTTCAGTCTAGAGTGGCGGTCTaGTGCTGCTGGAACTGCTTG +
Preference number: 4 (lower is better)
Translates to: YTPESSIGLKVQLVLLVQSRVAV*CCWNCL
Trigger: CAAGCAGTTCCAGCAGCAGCAGACCGCCACTCTAGA...CTGAACTAAAAGGACTAATTGTACTTTGAGGCCAATGCTGCTTTCTGGTGTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp CAGCAATTCTCAGTCATGCAAATGCCCGTGTTAAAGTTCTCCATTGGATTTAAATCTAGAGTGGCGGTCTaGTGCTGCTGGAACTGCTTG +
Preference number: 4 (lower is better)
Translates to: QQFSVMQMPVLKFSIGFKSRVAV*CCWNCL
Trigger: CAAGCAGTTCCAGCAGCAGCAGACCGCCACTCTAGA...TTTAAATCCAATGGAGAACTTTAACACGGGCATTTGCATGACTGAGAATTGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp TATACACCAGAAAGCAGCATTGGCCTCAAAGTACAATTAGTCCTTTTAGTTCAGGCATCATCAAGCTGCTaGAGGACCGACTCGATGTGG +
Preference number: 4 (lower is better)
Translates to: YTPESSIGLKVQLVLLVQASSSC*RTDSMW
Trigger: CCACATCGAGTCGGTCCTGCAGCAGCTTGATGATGC...CTGAACTAAAAGGACTAATTGTACTTTGAGGCCAATGCTGCTTTCTGGTGTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp TATACACCAGAAAGCAGCATTGGCCTCAAAGTACAATTAGTCCTTTTAGTTCAGTGGGCATCATCAAGCTaGTGCAGGACCGACTCGATG +
Preference number: 4 (lower is better)
Translates to: YTPESSIGLKVQLVLLVQWASSS*CRTDSM
Trigger: CATCGAGTCGGTCCTGCAGCAGCTTGATGATGCCCA...CTGAACTAAAAGGACTAATTGTACTTTGAGGCCAATGCTGCTTTCTGGTGTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp TTATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAATGGGCATCATCAAGCTaGTGCAGGACCGACTCGATG +
Preference number: 4 (lower is better)
Translates to: LFTVTFSLALVHTARLCEWASSS*CRTDSM
Trigger: CATCGAGTCGGTCCTGCAGCAGCTTGATGATGCCCA...TTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp TACAAAGACAGTCCTTTCCTGAGCCAGGTGCAATTCCAGAGAATGACACTTTGCTGTACTGCTCAAAGATaGGCAGTTGCAGGAAGATGT +
Preference number: 4 (lower is better)
Translates to: YKDSPFLSQVQFQRMTLCCTAQR*AVAGRC
Trigger: ACATCTTCCTGCAACTGCGCATCTTTGAGCAGTACA...GCAAAGTGTCATTCTCTGGAATTGCACCTGGCTCAGGAAAGGACTGTCTTTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp TATACACCAGAAAGCAGCATTGGCCTCAAAGTACAATTAGTCCTTTTAGTTCAGTCCGTGATGTACTGGTaGAGATCCTGTCCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: YTPESSIGLKVQLVLLVQSVMYW*RSCPCW
Trigger: CCAGCAGGGACAGGATCTGCACCAGTACATCACGGA...CTGAACTAAAAGGACTAATTGTACTTTGAGGCCAATGCTGCTTTCTGGTGTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp TCTGTTAGGGTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAAATCTTCAGCATGAGCTaGTGCCAGTGGAGGGCCACC +
Preference number: 4 (lower is better)
Translates to: SVRVMYQVLFHGFKKDLEIFSMS*CQWRAT
Trigger: GGTGGCCCTCCACTGGCAGCAGCTCATGCTGAAGAT...TTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCACCCTAACAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp CTGACGAGGTTTAAGAGGTACATCTCTCAATTCAGAGAACTGCACGGAGTGAAATCTCTCCGGTATTCTTaGTCTAAGCTCTCCAGGACA +
Preference number: 4 (lower is better)
Translates to: LTRFKRYISQFRELHGVKSLRYS*SKLSRT
Trigger: TGTCCTGGAGAGCTTAGAGCAAGAATACCGGAGAGA...TTTCACTCCGTGCAGTTCTCTGAATTGAGAGATGTACCTCTTAAACCTCGTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp CATTTTAGACTTTGGAGAGAAGCTCAGCAACCTCGAATTGCACCCAGTAGAGAATCTCTCCGGTATTCTTaGTCTAAGCTCTCCAGGACA +
Preference number: 4 (lower is better)
Translates to: HFRLWREAQQPRIAPSRESLRYS*SKLSRT
Trigger: TGTCCTGGAGAGCTTAGAGCAAGAATACCGGAGAGA...TTCTCTACTGGGTGCAATTCGAGGTTGCTGAGCTTCTCTCCAAAGTCTAAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp TTATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAATGGTCGATCTCTGCTaGTGGCCCCAGCTTATCTCG +
Preference number: 4 (lower is better)
Translates to: LFTVTFSLALVHTARLCEMVDLC*WPQLIS
Trigger: CGAGATAAGCTGGGGCCAGCAGCAGAGATCGACCAT...TTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp TATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAAATGGTCGATCTCTGCTaGTGGCCCCAGCTTATCTCG +
Preference number: 4 (lower is better)
Translates to: YLQSHSVLLWFTLHVYVKMVDLC*WPQLIS
Trigger: CGAGATAAGCTGGGGCCAGCAGCAGAGATCGACCAT...TTTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp TATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAAGACATGGTCGATCTCTaGTGCTGGCCCCAGCTTATC +
Preference number: 4 (lower is better)
Translates to: YLQSHSVLLWFTLHVYVKDMVDL*CWPQLI
Trigger: GATAAGCTGGGGCCAGCAGCAGAGATCGACCATGTC...TTTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp TATACACCAGAAAGCAGCATTGGCCTCAAAGTACAATTAGTCCTTTTAGTTCAGGACATGGTCGATCTCTaGTGCTGGCCCCAGCTTATC +
Preference number: 4 (lower is better)
Translates to: YTPESSIGLKVQLVLLVQDMVDL*CWPQLI
Trigger: GATAAGCTGGGGCCAGCAGCAGAGATCGACCATGTC...CTGAACTAAAAGGACTAATTGTACTTTGAGGCCAATGCTGCTTTCTGGTGTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp TTATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAATGGCTTTCACTTGTTaGTCGGGTCCCCGAGTGTGG +
Preference number: 4 (lower is better)
Translates to: LFTVTFSLALVHTARLCEMAFTC*SGPRVW
Trigger: CCACACTCGGGGACCCGAGCAACAAGTGAAAGCCAT...TTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp CAGCAATTCTCAGTCATGCAAATGCCCGTGTTAAAGTTCTCCATTGGATTTAAAACGCGATTCTCCCTCTaGAGGAGCTCACTCAGGATG +
Preference number: 4 (lower is better)
Translates to: QQFSVMQMPVLKFSIGFKTRFSL*RSSLRM
Trigger: CATCCTGAGTGAGCTCCTGCAGAGGGAGAATCGCGT...TTTAAATCCAATGGAGAACTTTAACACGGGCATTTGCATGACTGAGAATTGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp TTATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAACGCGATTCTCCCTCTaGAGGAGCTCACTCAGGATG +
Preference number: 4 (lower is better)
Translates to: LFTVTFSLALVHTARLCETRFSL*RSSLRM
Trigger: CATCCTGAGTGAGCTCCTGCAGAGGGAGAATCGCGT...TTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp CTGACGAGGTTTAAGAGGTACATCTCTCAATTCAGAGAACTGCACGGAGTGAAAACCTTCTCCTTTGTTTaGTTGGCAGGCACCCTGAAT +
Preference number: 4 (lower is better)
Translates to: LTRFKRYISQFRELHGVKTFSFV*LAGTLN
Trigger: ATTCAGGGTGCCTGCCAAGCAAACAAAGGAGAAGGT...TTTCACTCCGTGCAGTTCTCTGAATTGAGAGATGTACCTCTTAAACCTCGTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp CATTTTAGACTTTGGAGAGAAGCTCAGCAACCTCGAATTGCACCCAGTAGAGAAACCTTCTCCTTTGTTTaGTTGGCAGGCACCCTGAAT +
Preference number: 4 (lower is better)
Translates to: HFRLWREAQQPRIAPSRETFSFV*LAGTLN
Trigger: ATTCAGGGTGCCTGCCAAGCAAACAAAGGAGAAGGT...TTCTCTACTGGGTGCAATTCGAGGTTGCTGAGCTTCTCTCCAAAGTCTAAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp TTATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAACCACAAGGCGAATTTaGAGGGATCGCCCTCCACGT +
Preference number: 4 (lower is better)
Translates to: LFTVTFSLALVHTARLCETTRRI*RDRPPR
Trigger: ACGTGGAGGGCGATCCCTGCAAATTCGCCTTGTGGT...TTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp TCTGTTAGGGTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACCACGGACTCGGACTTaGCTCCATTCTCGCTTGAGG +
Preference number: 4 (lower is better)
Translates to: SVRVMYQVLFHGFKKDLEPRTRT*LHSRLR
Trigger: CCTCAAGCGAGAATGGAGGCAAGTCCGAGTCCGTGG...TTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCACCCTAACAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp CTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTCATTTTGATGTTTCCATCTaGCTTCCCGCTGTTAAGCCG +
Preference number: 4 (lower is better)
Translates to: LSFQNNSELPVNLRGAFHFDVSI*LPAVKP
Trigger: CGGCTTAACAGCGGGAAGGCAGATGGAAACATCAAA...ATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp TCTGTTAGGGTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAATGGTCCGGGACTGCATaGCTGCATCCAGCTCGATCA +
Preference number: 4 (lower is better)
Translates to: SVRVMYQVLFHGFKKDLEWSGTA*LHPARS
Trigger: TGATCGAGCTGGATGCAGGCATGCAGTCCCGGACCA...TTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCACCCTAACAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp GTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACCAGGCCTTTCAGCGTTGGCGGCTTaGAGAACAACCCTCTCAGAA +
Preference number: 4 (lower is better)
Translates to: VMYQVLFHGFKKDLEPGLSALAA*RTTLSE
Trigger: TTCTGAGAGGGTTGTTCTGCAAGCCGCCAACGCTGA...AAGGCCTGGTTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp ATTCAGGTCATCCACAGTGGACAGAACAGAACTTGCCAAGCTGGACTTTATGGAACCTCATCACAGCTGTaGTCCTTTCTTTCCGTTGAT +
Preference number: 4 (lower is better)
Translates to: IQVIHSGQNRTCQAGLYGTSSQL*SFLSVD
Trigger: ATCAACGGAAAGAAAGGAGCACAGCTGTGATGAGGT...TCCATAAAGTCCAGCTTGGCAAGTTCTGTTCTGTCCACTGTGGATGACCTGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR GCA 90 bp TCTGTTAGGGTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAATGGACGAGGTCCCATTaGAGCCTCCCAGGTCGTTCT +
Preference number: 4 (lower is better)
Translates to: SVRVMYQVLFHGFKKDLEWTRSH*SLPGRS
Trigger: AGAACGACCTGGGAGGCTGCAATGGGACCTCGTCCA...TTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCACCCTAACAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp TTATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAACCAGACACATGTTCTaGTGGTTGACGGCGAGGACC +
Preference number: 4 (lower is better)
Translates to: LFTVTFSLALVHTARLCETRHMF*WLTART
Trigger: GGTCCTCGCCGTCAACCAGCAGAACATGTGTCTGGT...TTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp TATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAAACCAGACACATGTTCTaGTGGTTGACGGCGAGGACC +
Preference number: 4 (lower is better)
Translates to: YLQSHSVLLWFTLHVYVKTRHMF*WLTART
Trigger: GGTCCTCGCCGTCAACCAGCAGAACATGTGTCTGGT...TTTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp GTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACCAGGCCTTGTCACTACTTTCTGCTaGTGTGGCTTTGGTGAGGGG +
Preference number: 4 (lower is better)
Translates to: VMYQVLFHGFKKDLEPGLVTTFC*CGFGEG
Trigger: CCCCTCACCAAAGCCACAGCAGCAGAAAGTAGTGAC...AAGGCCTGGTTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp AGCAGAAACTCAACTTGTTATAAAAACTCAGAATGGCTCAGCAGGGGGATCTTGGCTGCTGGAACACCTTaGACTTTGACTGTTGCAGAC +
Preference number: 4 (lower is better)
Translates to: SRNSTCYKNSEWLSRGILAAGTP*TLTVAD
Trigger: GTCTGCAACAGTCAAAGTGCAAGGTGTTCCAGCAGC...CAAGATCCCCCTGCTGAGCCATTCTGAGTTTTTATAACAAGTTGAGTTTCTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR GCA 90 bp TCTGTTAGGGTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAAGGCTGCAGCCATGGATaGTGCAAGCATGTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: SVRVMYQVLFHGFKKDLEGCSHG*CKHVAA
Trigger: AGCAGCCACATGCTTGCAGCATCCATGGCTGCAGCC...TTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCACCCTAACAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp GGCAGGCTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGCATGGTGACAGGTATTaGAATCTCAGTTACAACTTA +
Preference number: 4 (lower is better)
Translates to: GRLSFQNNSELPVNLRGAHGDRY*NLSYNL
Trigger: TAAGTTGTAACTGAGATTGCAATACCTGTCACCATG...CGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAGCCTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp GGCAGGCTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTGTTATTTCCAACTTaGTGTGGAGAACTCTTGAAC +
Preference number: 4 (lower is better)
Translates to: GRLSFQNNSELPVNLRGALLFPT*CGELLN
Trigger: GTTCAAGAGTTCTCCACAGCAAGTTGGAAATAACAA...CGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAGCCTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR CCA 90 bp CAGCAATTCTCAGTCATGCAAATGCCCGTGTTAAAGTTCTCCATTGGATTTAAAAAGCTCTTCCACTCCTaGTCCAGCTGGGTGGAGATC +
Preference number: 4 (lower is better)
Translates to: QQFSVMQMPVLKFSIGFKKLFHS*SSWVEI
Trigger: GATCTCCACCCAGCTGGACCAGGAGTGGAAGAGCTT...TTTAAATCCAATGGAGAACTTTAACACGGGCATTTGCATGACTGAGAATTGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp TATACACCAGAAAGCAGCATTGGCCTCAAAGTACAATTAGTCCTTTTAGTTCAGAAGCTCTTCCACTCCTaGTCCAGCTGGGTGGAGATC +
Preference number: 4 (lower is better)
Translates to: YTPESSIGLKVQLVLLVQKLFHS*SSWVEI
Trigger: GATCTCCACCCAGCTGGACCAGGAGTGGAAGAGCTT...CTGAACTAAAAGGACTAATTGTACTTTGAGGCCAATGCTGCTTTCTGGTGTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp TATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAATGCTCAGCCTTCTGGTaGAACACAGCAGACATGGCG +
Preference number: 4 (lower is better)
Translates to: YLQSHSVLLWFTLHVYVKCSAFW*NTADMA
Trigger: CGCCATGTCTGCTGTGTTCCACCAGAAGGCTGAGCA...TTTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp TATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAATGCTGTACATCCTGCTaGAAGACGCAGAGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: YLQSHSVLLWFTLHVYVKCCTSC*KTQSCS
Trigger: GCTGCAGCTCTGCGTCTTCCAGCAGGATGTACAGCA...TTTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp TACAAAGACAGTCCTTTCCTGAGCCAGGTGCAATTCCAGAGAATGACACTTTGCTGCTTGATCAGTTCCTaGACTGCATCCACAGAATCT +
Preference number: 4 (lower is better)
Translates to: YKDSPFLSQVQFQRMTLCCLISS*TASTES
Trigger: AGATTCTGTGGATGCAGTCCAGGAACTGATCAAGCA...GCAAAGTGTCATTCTCTGGAATTGCACCTGGCTCAGGAAAGGACTGTCTTTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp TTATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAGCGGTCTGCTGCTGCTaGAACTGCTTGATCAGTTCC +
Preference number: 4 (lower is better)
Translates to: LFTVTFSLALVHTARLCEAVCCC*NCLISS
Trigger: GGAACTGATCAAGCAGTTCCAGCAGCAGCAGACCGC...TTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp CAGCAATTCTCAGTCATGCAAATGCCCGTGTTAAAGTTCTCCATTGGATTTAAATCCTCCATCTGCACCTaGGCATCATCAAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: QQFSVMQMPVLKFSIGFKSSICT*ASSSCC
Trigger: GCAGCAGCTTGATGATGCCCAGGTGCAGATGGAGGA...TTTAAATCCAATGGAGAACTTTAACACGGGCATTTGCATGACTGAGAATTGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp CTGACGAGGTTTAAGAGGTACATCTCTCAATTCAGAGAACTGCACGGAGTGAAAAGATCCTGTCCCTGCTaGATAACCTCAAAGGTCATG +
Preference number: 4 (lower is better)
Translates to: LTRFKRYISQFRELHGVKRSCPC*ITSKVM
Trigger: CATGACCTTTGAGGTTATCCAGCAGGGACAGGATCT...TTTCACTCCGTGCAGTTCTCTGAATTGAGAGATGTACCTCTTAAACCTCGTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp CATTTTAGACTTTGGAGAGAAGCTCAGCAACCTCGAATTGCACCCAGTAGAGAAAGATCCTGTCCCTGCTaGATAACCTCAAAGGTCATG +
Preference number: 4 (lower is better)
Translates to: HFRLWREAQQPRIAPSRERSCPC*ITSKVM
Trigger: CATGACCTTTGAGGTTATCCAGCAGGGACAGGATCT...TTCTCTACTGGGTGCAATTCGAGGTTGCTGAGCTTCTCTCCAAAGTCTAAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp CTGACGAGGTTTAAGAGGTACATCTCTCAATTCAGAGAACTGCACGGAGTGAAATCTTCTGCAAGGAAGTaGCATGAAAGAGGGACTCGA +
Preference number: 4 (lower is better)
Translates to: LTRFKRYISQFRELHGVKSSARK*HERGTR
Trigger: TCGAGTCCCTCTTTCATGCCACTTCCTTGCAGAAGA...TTTCACTCCGTGCAGTTCTCTGAATTGAGAGATGTACCTCTTAAACCTCGTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360013.7
CDS-3UTR CCA 90 bp CTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTCATAATTCACCTGTTTCTTaGATCCAGTCAAGCGCCTGC +
Preference number: 4 (lower is better)
Translates to: LSFQNNSELPVNLRGAFHNSPVS*IQSSAC
Trigger: GCAGGCGCTTGACTGGATCCAAGAAACAGGTGAATT...ATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp CTGACGAGGTTTAAGAGGTACATCTCTCAATTCAGAGAACTGCACGGAGTGAAAAGTGCTTGTCCACCGTaGTCACCCATTTCCTTATCT +
Preference number: 4 (lower is better)
Translates to: LTRFKRYISQFRELHGVKSACPP*SPISLS
Trigger: AGATAAGGAAATGGGTGACCACGGTGGACAAGCACT...TTTCACTCCGTGCAGTTCTCTGAATTGAGAGATGTACCTCTTAAACCTCGTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp GCCAGTGTTTGGGAAAGGCTAAAGTTAACCCTCATCTTCTCTACCACACATCATATCCGAAAGGCTTGCTaGGATAATATCCAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: ASVWERLKLTLIFSTTHHIRKAC*DNIQLQ
Trigger: CTGGAGCTGGATATTATCCCAGCAAGCCTTTCGGAT...ATGATGTGTGGTAGAGAAGATGAGGGTTAACTTTAGCCTTTCCCAAACACTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp GTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACCAGGCCTTTCTTCATTGACTTCGTaGTTGGCGTCCCGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: VMYQVLFHGFKKDLEPGLSSLTS*LASRSL
Trigger: CAAGCTGCGGGACGCCAACCACGAAGTCAATGAAGA...AAGGCCTGGTTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp GTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACCAGGCCTTAGGAAGAGATGGAGTTaGCCAGACCATGCCGCTGTT +
Preference number: 4 (lower is better)
Translates to: VMYQVLFHGFKKDLEPGLRKRWS*PDHAAV
Trigger: AACAGCGGCATGGTCTGGCCAACTCCATCTCTTCCT...AAGGCCTGGTTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp CAGCAATTCTCAGTCATGCAAATGCCCGTGTTAAAGTTCTCCATTGGATTTAAACTGGGGGAAGTACATTaGGCCATTGGGCCTCTCACA +
Preference number: 4 (lower is better)
Translates to: QQFSVMQMPVLKFSIGFKLGEVH*AIGPLT
Trigger: TGTGAGAGGCCCAATGGCCCAATGTACTTCCCCCAG...TTTAAATCCAATGGAGAACTTTAACACGGGCATTTGCATGACTGAGAATTGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp GCCAGTGTTTGGGAAAGGCTAAAGTTAACCCTCATCTTCTCTACCACACATCATATGAAACTCTGTGTTTaGGGTTGGGGCTCTCTCTTG +
Preference number: 4 (lower is better)
Translates to: ASVWERLKLTLIFSTTHHMKLCV*GWGSLL
Trigger: CAAGAGAGAGCCCCAACCCCAAACACAGAGTTTCAT...ATGATGTGTGGTAGAGAAGATGAGGGTTAACTTTAGCCTTTCCCAAACACTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp TATACACCAGAAAGCAGCATTGGCCTCAAAGTACAATTAGTCCTTTTAGTTCAGTTTAGGAGGTGTGGGTaGGGCCATCCCCTCATTCAG +
Preference number: 4 (lower is better)
Translates to: YTPESSIGLKVQLVLLVQFRRCG*GHPLIQ
Trigger: CTGAATGAGGGGATGGCCCCACCCACACCTCCTAAA...CTGAACTAAAAGGACTAATTGTACTTTGAGGCCAATGCTGCTTTCTGGTGTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp TCTGTTAGGGTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAAGCTGGATGTCAGCGTTaGCGGCTTGCAGAACAACCC +
Preference number: 4 (lower is better)
Translates to: SVRVMYQVLFHGFKKDLEAGCQR*RLAEQP
Trigger: GGGTTGTTCTGCAAGCCGCCAACGCTGACATCCAGC...TTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCACCCTAACAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp TATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAAGAGGTGGGTTATAGCTaGAGCCCTTTGGGGGCTTCT +
Preference number: 4 (lower is better)
Translates to: YLQSHSVLLWFTLHVYVKEVGYS*SPLGAS
Trigger: AGAAGCCCCCAAAGGGCTCCAGCTATAACCCACCTC...TTTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp TATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAAGGTCGTTCTGCTTGCTaGCTTCGAACTTGTCCCCAG +
Preference number: 4 (lower is better)
Translates to: YLQSHSVLLWFTLHVYVKGRSAC*LRTCPQ
Trigger: CTGGGGACAAGTTCGAAGCCAGCAAGCAGAACGACC...TTTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp TATACACCAGAAAGCAGCATTGGCCTCAAAGTACAATTAGTCCTTTTAGTTCAGGGTCGTTCTGCTTGCTaGCTTCGAACTTGTCCCCAG +
Preference number: 4 (lower is better)
Translates to: YTPESSIGLKVQLVLLVQGRSAC*LRTCPQ
Trigger: CTGGGGACAAGTTCGAAGCCAGCAAGCAGAACGACC...CTGAACTAAAAGGACTAATTGTACTTTGAGGCCAATGCTGCTTTCTGGTGTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp TATACACCAGAAAGCAGCATTGGCCTCAAAGTACAATTAGTCCTTTTAGTTCAGAGACACATGTTCTGCTaGTTGACGGCGAGGACCTGG +
Preference number: 4 (lower is better)
Translates to: YTPESSIGLKVQLVLLVQRHMFC*LTARTW
Trigger: CCAGGTCCTCGCCGTCAACCAGCAGAACATGTGTCT...CTGAACTAAAAGGACTAATTGTACTTTGAGGCCAATGCTGCTTTCTGGTGTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp TTATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAATGGTCGCTGGCAGGCTaGTACACCAGACACATGTTC +
Preference number: 4 (lower is better)
Translates to: LFTVTFSLALVHTARLCEWSLAG*YTRHMF
Trigger: GAACATGTGTCTGGTGTACCAGCCTGCCAGCGACCA...TTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp CTGACGAGGTTTAAGAGGTACATCTCTCAATTCAGAGAACTGCACGGAGTGAAAGTTTACGAGGCCCTGTaGCTTCATTTTTACCCGTGT +
Preference number: 4 (lower is better)
Translates to: LTRFKRYISQFRELHGVKVYEAL*LHFYPC
Trigger: ACACGGGTAAAAATGAAGCCACAGGGCCTCGTAAAC...TTTCACTCCGTGCAGTTCTCTGAATTGAGAGATGTACCTCTTAAACCTCGTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp CCCAGGATCATCATCATCTGGGATTCCTTGTTATTTCCAACTTGCTGTGGAGAAAGGAGACCGTGTATGTaGCTGAGCTGTTATCAGTGT +
Preference number: 4 (lower is better)
Translates to: PRIIIIWDSLLFPTCCGERRPCM*LSCYQC
Trigger: ACACTGATAACAGCTCAGCCACATACACGGTCTCCT...TTCTCCACAGCAAGTTGGAAATAACAAGGAATCCCAGATGATGATGATCCTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR CCA 90 bp CTGACGAGGTTTAAGAGGTACATCTCTCAATTCAGAGAACTGCACGGAGTGAAAAGGAGACCGTGTATGTaGCTGAGCTGTTATCAGTGT +
Preference number: 4 (lower is better)
Translates to: LTRFKRYISQFRELHGVKRRPCM*LSCYQC
Trigger: ACACTGATAACAGCTCAGCCACATACACGGTCTCCT...TTTCACTCCGTGCAGTTCTCTGAATTGAGAGATGTACCTCTTAAACCTCGTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp CTGACGAGGTTTAAGAGGTACATCTCTCAATTCAGAGAACTGCACGGAGTGAAAGTTGATGTGGTCCCGTaGTCATTTGTTGCTATGCAG +
Preference number: 4 (lower is better)
Translates to: LTRFKRYISQFRELHGVKVDVVP*SFVAMQ
Trigger: CTGCATAGCAACAAATGACCACGGGACCACATCAAC...TTTCACTCCGTGCAGTTCTCTGAATTGAGAGATGTACCTCTTAAACCTCGTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp CTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTCATGTTGATGTGGTCCCGTaGTCATTTGTTGCTATGCAG +
Preference number: 4 (lower is better)
Translates to: LSFQNNSELPVNLRGAFHVDVVP*SFVAMQ
Trigger: CTGCATAGCAACAAATGACCACGGGACCACATCAAC...ATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp ATCAATTGTTACAAGCCTGATGGAAGTATGTACTTATATGTATATGTGCGATGGGTGCAGCTTCTCTCCTaGGCAATGGGGCGGTTAGGG +
Preference number: 4 (lower is better)
Translates to: INCYKPDGSMYLYVYVRWVQLLS*AMGRLG
Trigger: CCCTAACCGCCCCATTGCCCAGGAGAGAAGCTGCAC...CCATCGCACATATACATATAAGTACATACTTCCATCAGGCTTGTAACAATTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR CCA 90 bp TATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAAAGCATGTGGCTGCTGTaGGCCGCCTCCGAAAATCTT +
Preference number: 4 (lower is better)
Translates to: YLQSHSVLLWFTLHVYVKSMWLL*AASENL
Trigger: AAGATTTTCGGAGGCGGCCCACAGCAGCCACATGCT...TTTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp TTATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAAGCATGTGGCTGCTGTaGGCCGCCTCCGAAAATCTT +
Preference number: 4 (lower is better)
Translates to: LFTVTFSLALVHTARLCESMWLL*AASENL
Trigger: AAGATTTTCGGAGGCGGCCCACAGCAGCCACATGCT...TTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp TTGACCATACTGAATAAGGACATGGTGAGTTTGAACTTTGCCCTACTACAAAGAATAGGGGCTGGGAGATaGCTACGTCCCTTGGTTCAC +
Preference number: 4 (lower is better)
Translates to: LTILNKDMVSLNFALLQRIGAGR*LRPLVH
Trigger: GTGAACCAAGGGACGTAGCCATCTCCCAGCCCCTAT...TCTTTGTAGTAGGGCAAAGTTCAAACTCACCATGTCCTTATTCAGTATGGTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR CCA 90 bp GGCAGGCTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGGAAATCAGAAAGTGTTaGTACGTTGTTCATAGGAAC +
Preference number: 4 (lower is better)
Translates to: GRLSFQNNSELPVNLRGAEIRKC*YVVHRN
Trigger: GTTCCTATGAACAACGTACCAACACTTTCTGATTTC...CGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAGCCTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp CTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTCATTCAGGTCATCCACAGTaGACAGAACAGAACTTGCCA +
Preference number: 4 (lower is better)
Translates to: LSFQNNSELPVNLRGAFHSGHPQ*TEQNLP
Trigger: TGGCAAGTTCTGTTCTGTCCACTGTGGATGACCTGA...ATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR CCA 90 bp TCTGTTAGGGTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAAGTCCCCCACCTGCCGTaGTCTGCACACCATTGTTCT +
Preference number: 4 (lower is better)
Translates to: SVRVMYQVLFHGFKKDLEVPHLP*SAHHCS
Trigger: AGAACAATGGTGTGCAGACCACGGCAGGTGGGGGAC...TTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCACCCTAACAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR CCA 90 bp AGCAGAAACTCAACTTGTTATAAAAACTCAGAATGGCTCAGCAGGGGGATCTTGCTCTCTTATCTCTGTTaGGAGGGACCAGGAGCTTTG +
Preference number: 4 (lower is better)
Translates to: SRNSTCYKNSEWLSRGILLSYLC*EGPGAL
Trigger: CAAAGCTCCTGGTCCCTCCCAACAGAGATAAGAGAG...CAAGATCCCCCTGCTGAGCCATTCTGAGTTTTTATAACAAGTTGAGTTTCTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR CCA 90 bp GGCAGGCTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGCACACTTTGTTAGTTTaGCTTTGTGGATGTCAAAAG +
Preference number: 4 (lower is better)
Translates to: GRLSFQNNSELPVNLRGAHTLLV*LCGCQK
Trigger: CTTTTGACATCCACAAAGCCAAACTAACAAAGTGTG...CGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAGCCTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR CCA 90 bp TATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAAGGTGCGTCTTCTCGATaGCCAGTTGGAACTGCTCGT +
Preference number: 4 (lower is better)
Translates to: YLQSHSVLLWFTLHVYVKGASSR*PVGTAR
Trigger: ACGAGCAGTTCCAACTGGCCATCGAGAAGACGCACC...TTTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354186.8
3UTR CAA 72 bp CAGAACATGGATTCAGTTGTTGATGGAAGTCAGGTATaGATGGAAACTCATATGATGGCCATCCCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: QNMDSVVDGSQV*METHMMAIPGP
Trigger: TGGCCCAGGGATGGCCATCATATGAGTTTCCATCAATACCTGACTTCCATCAACAACTGAATCCATGTTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR TCA 90 bp CTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTCATTCAGCACCTTTTTCTTaGGCTGTGTGTGTTCGTCAA +
Preference number: 4 (lower is better)
Translates to: LSFQNNSELPVNLRGAFHSAPFS*AVCVRQ
Trigger: TTGACGAACACACACAGCTCAAGAAAAAGGTGCTGA...ATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp GCCAGTGTTTGGGAAAGGCTAAAGTTAACCCTCATCTTCTCTACCACACATCATTCAGCACCTTTTTCTTaGGCTGTGTGTGTTCGTCAA +
Preference number: 4 (lower is better)
Translates to: ASVWERLKLTLIFSTTHHSAPFS*AVCVRQ
Trigger: TTGACGAACACACACAGCTCAAGAAAAAGGTGCTGA...ATGATGTGTGGTAGAGAAGATGAGGGTTAACTTTAGCCTTTCCCAAACACTGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR TCA 90 bp GCCAGTGTTTGGGAAAGGCTAAAGTTAACCCTCATCTTCTCTACCACACATCATGGGTGGAGATCTGCTTaGTTTGTTGTGAGGCATAAT +
Preference number: 4 (lower is better)
Translates to: ASVWERLKLTLIFSTTHHGWRSA*FVVRHN
Trigger: ATTATGCCTCACAACAAATCAAGCAGATCTCCACCC...ATGATGTGTGGTAGAGAAGATGAGGGTTAACTTTAGCCTTTCCCAAACACTGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR TCA 90 bp TTATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAACTCCAGTGTGTTTGCTaGGAAAGGCCTCACCATGGT +
Preference number: 4 (lower is better)
Translates to: LFTVTFSLALVHTARLCELQCVC*ERPHHG
Trigger: ACCATGGTGAGGCCTTTCTCAGCAAACACACTGGAG...TTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp TTATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAGGAAGATGTCCAGCTTaGTCTTCCGCTCGTGGAACA +
Preference number: 4 (lower is better)
Translates to: LFTVTFSLALVHTARLCEGRCPA*SSARGT
Trigger: TGTTCCACGAGCGGAAGATCAAGCTGGACATCTTCC...TTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp CATTTTAGACTTTGGAGAGAAGCTCAGCAACCTCGAATTGCACCCAGTAGAGAATTAGGTCCTCTGTGTTaGAGTCATTCATCTGCCGAA +
Preference number: 4 (lower is better)
Translates to: HFRLWREAQQPRIAPSRELGPLC*SHSSAE
Trigger: TTCGGCAGATGAATGACTTCAACACAGAGGACCTAA...TTCTCTACTGGGTGCAATTCGAGGTTGCTGAGCTTCTCTCCAAAGTCTAAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR TCA 90 bp TATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAATGCTCTAGCCGCTTATaGGTCTGCTCTGCATTGAGC +
Preference number: 4 (lower is better)
Translates to: YLQSHSVLLWFTLHVYVKCSSRL*VCSALS
Trigger: GCTCAATGCAGAGCAGACTCATAAGCGGCTAGAGCA...TTTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp TCTGTTAGGGTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAAACTTCAGCCTGGAGGTaGCGTAATTGGAGGCACTGC +
Preference number: 4 (lower is better)
Translates to: SVRVMYQVLFHGFKKDLETSAWR*RNWRHC
Trigger: GCAGTGCCTCCAATTACGTCACCTCCAGGCTGAAGT...TTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCACCCTAACAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp TCTGTTAGGGTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAATGCAAGGAAGTGGCATaGAAGAGGGACTCGATGGCC +
Preference number: 4 (lower is better)
Translates to: SVRVMYQVLFHGFKKDLECKEVA*KRDSMA
Trigger: GGCCATCGAGTCCCTCTTTCATGCCACTTCCTTGCA...TTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCACCCTAACAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360013.7
CDS-3UTR TCA 90 bp GCCAGTGTTTGGGAAAGGCTAAAGTTAACCCTCATCTTCTCTACCACACATCATCTTCTCGAATGTTCTTaGTCCACTCCTGCTTGGTTT +
Preference number: 4 (lower is better)
Translates to: ASVWERLKLTLIFSTTHHLLECS*STPAWF
Trigger: AAACCAAGCAGGAGTGGATCAAGAACATTCGAGAAG...ATGATGTGTGGTAGAGAAGATGAGGGTTAACTTTAGCCTTTCCCAAACACTGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR TCA 90 bp GTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACCAGGCCTTCTGTCCACTGTGTTCTaGGAGGTCCTAGAAGCAATG +
Preference number: 4 (lower is better)
Translates to: VMYQVLFHGFKKDLEPGLLSTVF*EVLEAM
Trigger: CATTGCTTCTAGGACCTCTCAGAACACAGTGGACAG...AAGGCCTGGTTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp GTAAAAGCTGATATGAAAGCTTGGGGTCTGTCTAACATTCTGTCAACTGCCCCCCTTTCTTCTGCTTTTTaGTGTTTCCATCTGCCTTCC +
Preference number: 4 (lower is better)
Translates to: VKADMKAWGLSNILSTAPLSSAF*CFHLPS
Trigger: GGAAGGCAGATGGAAACATCAAAAAGCAGAAGAAAG...GGGGGCAGTTGACAGAATGTTAGACAGACCCCAAGCTTTCATATCAGCTTTTAC
44% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR TCA 90 bp ATTCAGGTCATCCACAGTGGACAGAACAGAACTTGCCAAGCTGGACTTTATGGATGCTTTCTCAATATCTaGACACTCCAAACCAGCCTT +
Preference number: 4 (lower is better)
Translates to: IQVIHSGQNRTCQAGLYGCFLNI*TLQTSL
Trigger: AAGGCTGGTTTGGAGTGTTCAGATATTGAGAAAGCA...TCCATAAAGTCCAGCTTGGCAAGTTCTGTTCTGTCCACTGTGGATGACCTGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR TCA 90 bp CTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTCATAAGTCTCTCTGTTCATaGGTGCAAACTTGCAGGGAT +
Preference number: 4 (lower is better)
Translates to: LSFQNNSELPVNLRGAFHKSLCS*VQTCRD
Trigger: ATCCCTGCAAGTTTGCACTCATGAACAGAGAGACTT...ATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp CTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTCATAAGATCATCACACTCTaGTTCCTCGGAACTGTTCGT +
Preference number: 4 (lower is better)
Translates to: LSFQNNSELPVNLRGAFHKIITL*FLGTVR
Trigger: ACGAACAGTTCCGAGGAATCAGAGTGTGATGATCTT...ATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp GTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACCAGGCCTTGACCGTGTATGTGGCTaGGCTGTTATCAGTGTCAAG +
Preference number: 4 (lower is better)
Translates to: VMYQVLFHGFKKDLEPGLDRVCG*AVISVK
Trigger: CTTGACACTGATAACAGCTCAGCCACATACACGGTC...AAGGCCTGGTTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp TTATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAGACTGTTGCAGACGTTaGTGTGGTCCCGTGGTCATT +
Preference number: 4 (lower is better)
Translates to: LFTVTFSLALVHTARLCEDCCRR*CGPVVI
Trigger: AATGACCACGGGACCACATCAACGTCTGCAACAGTC...TTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp TATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAAGACTGCTGCCAGATCTaGGAACCTTCCTCTCTGTAC +
Preference number: 4 (lower is better)
Translates to: YLQSHSVLLWFTLHVYVKDCCQI*EPSSLY
Trigger: GTACAGAGAGGAAGGTTCTCAGATCTGGCAGCAGTC...TTTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp TTATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAAGGTGTCATGGAGAGTaGTGTACTGGGGGTGCTGTA +
Preference number: 4 (lower is better)
Translates to: LFTVTFSLALVHTARLCERCHGE*CTGGAV
Trigger: TACAGCACCCCCAGTACATCACTCTCCATGACACCT...TTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp GTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACCAGGCCTTATTCATGGGGGAAGCTaGAATCCACCCTGCATACGT +
Preference number: 4 (lower is better)
Translates to: VMYQVLFHGFKKDLEPGLIHGGS*NPPCIR
Trigger: ACGTATGCAGGGTGGATTTCAGCTTCCCCCATGAAT...AAGGCCTGGTTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp TCTGTTAGGGTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACACTGCACGTCTATGTaGAACCATAGGGGCTGGGAG +
Preference number: 4 (lower is better)
Translates to: SVRVMYQVLFHGFKKDLEHCTSM*NHRGWE
Trigger: CTCCCAGCCCCTATGGTTTCACATAGACGTGCAGTG...TTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCACCCTAACAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp TATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAACTGCTGCTCAGACCCTaGATAACCACTGACGAGGTT +
Preference number: 4 (lower is better)
Translates to: YLQSHSVLLWFTLHVYVKLLLRP*ITTDEV
Trigger: AACCTCGTCAGTGGTTATTCAGGGTCTGAGCAGCAG...TTTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp TTATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAATTCTGAGCTGCCAGTaGATTTGCGGGGAGCGTTTC +
Preference number: 4 (lower is better)
Translates to: LFTVTFSLALVHTARLCEILSCQ*ICGERF
Trigger: GAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAAT...TTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp CTGACGAGGTTTAAGAGGTACATCTCTCAATTCAGAGAACTGCACGGAGTGAAAAGCCAGCCAACTTTCTaGAAGATGGTATTCTACAGC +
Preference number: 4 (lower is better)
Translates to: LTRFKRYISQFRELHGVKSQPTF*KMVFYS
Trigger: GCTGTAGAATACCATCTTTCAGAAAGTTGGCTGGCT...TTTCACTCCGTGCAGTTCTCTGAATTGAGAGATGTACCTCTTAAACCTCGTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp TTATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAATCAGCGGCTGCATGGTaGCAGGTATTGCAATCTCAG +
Preference number: 4 (lower is better)
Translates to: LFTVTFSLALVHTARLCESAAAW*QVLQSQ
Trigger: CTGAGATTGCAATACCTGTCACCATGCAGCCGCTGA...TTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp CCCAGGATCATCATCATCTGGGATTCCTTGTTATTTCCAACTTGCTGTGGAGAAGCTGTGGAGAACTCTTaGACCAAGACTACTCTCTTA +
Preference number: 4 (lower is better)
Translates to: PRIIIIWDSLLFPTCCGEAVENS*TKTTLL
Trigger: TAAGAGAGTAGTCTTGGTTCAAGAGTTCTCCACAGC...TTCTCCACAGCAAGTTGGAAATAACAAGGAATCCCAGATGATGATGATCCTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR TCA 90 bp TTATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAATTGATGGAGCGTGTGTaGGCTCTGTCGTCTCTAAGC +
Preference number: 4 (lower is better)
Translates to: LFTVTFSLALVHTARLCELMERV*ALSSLS
Trigger: GCTTAGAGACGACAGAGCTCACACACGCTCCATCAA...TTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR TCA 90 bp CTGACGAGGTTTAAGAGGTACATCTCTCAATTCAGAGAACTGCACGGAGTGAAATTCTCGCTTGAGGAATaGGAGTATGCATCTTTCACC +
Preference number: 4 (lower is better)
Translates to: LTRFKRYISQFRELHGVKFSLEE*EYASFT
Trigger: GGTGAAAGATGCATACTCTCATTCCTCAAGCGAGAA...TTTCACTCCGTGCAGTTCTCTGAATTGAGAGATGTACCTCTTAAACCTCGTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp TTATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAGCAGACCACCTTCACTaGACATCTTGCACCAGGCAT +
Preference number: 4 (lower is better)
Translates to: LFTVTFSLALVHTARLCEADHLH*TSCTRH
Trigger: ATGCCTGGTGCAAGATGTGCAGTGAAGGTGGTCTGC...TTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp TCTGTTAGGGTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAAGCCAGCTCTAGGTCTTaGATCTCGGATGGCAGACCA +
Preference number: 4 (lower is better)
Translates to: SVRVMYQVLFHGFKKDLEASSRS*ISDGRP
Trigger: TGGTCTGCCATCCGAGATGCAAGACCTAGAGCTGGC...TTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCACCCTAACAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp GATAAAGAAACCGAAGCTCACACAAGACCACAAAGCAAGATTTTGCTGAGTCAAATCCAGTCCAACACCTaGTGTACATCCTGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: DKETEAHTRPQSKILLSQIQSNT*CTSCWK
Trigger: CTTCCAGCAGGATGTACAGCAGGTGTTGGACTGGAT...TTGACTCAGCAAAATCTTGCTTTGTGGTCTTGTGTGAGCTTCGGTTTCTTTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439170.2
CDS-3UTR GCA 90 bp CTGACGAGGTTTAAGAGGTACATCTCTCAATTCAGAGAACTGCACGGAGTGAAATGCATCCACAGAATCTaGACAGACATCCTCCAACAT +
Preference number: 4 (lower is better)
Translates to: LTRFKRYISQFRELHGVKCIHRI*TDILQH
Trigger: ATGTTGGAGGATGTCTGTGCAGATTCTGTGGATGCA...TTTCACTCCGTGCAGTTCTCTGAATTGAGAGATGTACCTCTTAAACCTCGTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp GCCAGTGTTTGGGAAAGGCTAAAGTTAACCCTCATCTTCTCTACCACACATCATTGCATCCACAGAATCTaGACAGACATCCTCCAACAT +
Preference number: 4 (lower is better)
Translates to: ASVWERLKLTLIFSTTHHCIHRI*TDILQH
Trigger: ATGTTGGAGGATGTCTGTGCAGATTCTGTGGATGCA...ATGATGTGTGGTAGAGAAGATGAGGGTTAACTTTAGCCTTTCCCAAACACTGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp ACAGATAAAGAAACCGAAGCTCACACAAGACCACAAAGCAAGATTTTGCTGAGTTGCTGCTGCTGGAACTaGTTGATCAGTTCCTGGACT +
Preference number: 4 (lower is better)
Translates to: TDKETEAHTRPQSKILLSCCCWN*LISSWT
Trigger: AGTCCAGGAACTGATCAAGCAGTTCCAGCAGCAGCA...ACTCAGCAAAATCTTGCTTTGTGGTCTTGTGTGAGCTTCGGTTTCTTTATCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439170.2
CDS-3UTR GCA 90 bp CAGCAATTCTCAGTCATGCAAATGCCCGTGTTAAAGTTCTCCATTGGATTTAAAAACAGCTCCTCCATCTaGACCTGGGCATCATCAAGC +
Preference number: 4 (lower is better)
Translates to: QQFSVMQMPVLKFSIGFKNSSSI*TWASSS
Trigger: GCTTGATGATGCCCAGGTGCAGATGGAGGAGCTGTT...TTTAAATCCAATGGAGAACTTTAACACGGGCATTTGCATGACTGAGAATTGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp TATACACCAGAAAGCAGCATTGGCCTCAAAGTACAATTAGTCCTTTTAGTTCAGAACAGCTCCTCCATCTaGACCTGGGCATCATCAAGC +
Preference number: 4 (lower is better)
Translates to: YTPESSIGLKVQLVLLVQNSSSI*TWASSS
Trigger: GCTTGATGATGCCCAGGTGCAGATGGAGGAGCTGTT...CTGAACTAAAAGGACTAATTGTACTTTGAGGCCAATGCTGCTTTCTGGTGTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp CTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTCATTGTACTGCTCAAAGATaGGCAGTTGCAGGAAGATGT +
Preference number: 4 (lower is better)
Translates to: LSFQNNSELPVNLRGAFHCTAQR*AVAGRC
Trigger: ACATCTTCCTGCAACTGCGCATCTTTGAGCAGTACA...ATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp GTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACCAGGCCTTGCATTGACTCTCCATTaGGGATCCATCCCAGAACCT +
Preference number: 4 (lower is better)
Translates to: VMYQVLFHGFKKDLEPGLALTLH*GSIPEP
Trigger: AGGTTCTGGGATGGATCCGCAATGGAGAGTCAATGC...AAGGCCTGGTTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp TCTGTTAGGGTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAAACGCGATTCTCCCTCTaGAGGAGCTCACTCAGGATG +
Preference number: 4 (lower is better)
Translates to: SVRVMYQVLFHGFKKDLETRFSL*RSSLRM
Trigger: CATCCTGAGTGAGCTCCTGCAGAGGGAGAATCGCGT...TTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCACCCTAACAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp GTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACCAGGCCTTTTCAAGGTCCAGAAATaGAGCACGCGATTCTCCCTC +
Preference number: 4 (lower is better)
Translates to: VMYQVLFHGFKKDLEPGLFKVQK*STRFSL
Trigger: GAGGGAGAATCGCGTGCTGCATTTCTGGACCTTGAA...AAGGCCTGGTTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp GTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACCAGGCCTTACATCCTCAGGCAGTTaGTCGTACTTCTCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: VMYQVLFHGFKKDLEPGLTSSGS*SYFSSS
Trigger: AGAGCTGGAGAAGTACGAGCAACTGCCTGAGGATGT...AAGGCCTGGTTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp CAGCAATTCTCAGTCATGCAAATGCCCGTGTTAAAGTTCTCCATTGGATTTAAAGGACAAGTCCCAGGATaGGCGCTAAACGTAAGTGGA +
Preference number: 4 (lower is better)
Translates to: QQFSVMQMPVLKFSIGFKGQVPG*ALNVSG
Trigger: TCCACTTACGTTTAGCGCGCATCCTGGGACTTGTCC...TTTAAATCCAATGGAGAACTTTAACACGGGCATTTGCATGACTGAGAATTGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp TCTGTTAGGGTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAAACTTCAGTGGAAGCCTaGCGGGCTGCTAGCAAAGAG +
Preference number: 4 (lower is better)
Translates to: SVRVMYQVLFHGFKKDLETSVEA*RAASKE
Trigger: CTCTTTGCTAGCAGCCCGGCAGGCTTCCACTGAAGT...TTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCACCCTAACAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp CTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTCATTGCATTGACAAGGTCTaGAGCAGTAGGTACTTCAGT +
Preference number: 4 (lower is better)
Translates to: LSFQNNSELPVNLRGAFHCIDKV*SSRYFS
Trigger: ACTGAAGTACCTACTGCTGCAGACCTTGTCAATGCA...ATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp CTGACGAGGTTTAAGAGGTACATCTCTCAATTCAGAGAACTGCACGGAGTGAAAGATTCATCATGTCATTaGAGCGTTTGGGAACAAGGC +
Preference number: 4 (lower is better)
Translates to: LTRFKRYISQFRELHGVKDSSCH*SVWEQG
Trigger: GCCTTGTTCCCAAACGCTGCAATGACATGATGAATC...TTTCACTCCGTGCAGTTCTCTGAATTGAGAGATGTACCTCTTAAACCTCGTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp TTATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAGTGCCCTCAAAGCCCTaGAGACGTCCTAGATTCATC +
Preference number: 4 (lower is better)
Translates to: LFTVTFSLALVHTARLCEVPSKP*RRPRFI
Trigger: GATGAATCTAGGACGTCTGCAGGGCTTTGAGGGCAC...TTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp TCTGTTAGGGTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACCGGGACTGCATGCCTaGATCCAGCTCGATCACATA +
Preference number: 4 (lower is better)
Translates to: SVRVMYQVLFHGFKKDLEPGLHA*IQLDHI
Trigger: TATGTGATCGAGCTGGATGCAGGCATGCAGTCCCGG...TTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCACCCTAACAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp GTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACCAGGCCTTCTGAAGATGACAATCTaGTCGAAGAGGAACACGCGC +
Preference number: 4 (lower is better)
Translates to: VMYQVLFHGFKKDLEPGLLKMTI*SKRNTR
Trigger: GCGCGTGTTCCTCTTCGAGCAGATTGTCATCTTCAG...AAGGCCTGGTTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp TCAGGTCATCCACAGTGGACAGAACAGAACTTGCCAAGCTGGACTTTATGGATACTCTCTGTTCATGAGTaGAAACTTGCAGGGATCATT +
Preference number: 4 (lower is better)
Translates to: SGHPQWTEQNLPSWTLWILSVHE*KLAGII
Trigger: AATGATCCCTGCAAGTTTGCACTCATGAACAGAGAG...TATCCATAAAGTCCAGCTTGGCAAGTTCTGTTCTGTCCACTGTGGATGACCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR GCA 90 bp GGCAGGCTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTCATTCTCCTTCAGTaGATAGTAATCTTTGATCAC +
Preference number: 4 (lower is better)
Translates to: GRLSFQNNSELPVNLRGAFILLQ*IVIFDH
Trigger: GTGATCAAAGATTACTATGCACTGAAGGAGAATGAA...CGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAGCCTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp TATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAACCCGTCACTACTTTCTaGTGCTGTGGCTTTGGTGAG +
Preference number: 4 (lower is better)
Translates to: YLQSHSVLLWFTLHVYVKPVTTF*CCGFGE
Trigger: CTCACCAAAGCCACAGCAGCAGAAAGTAGTGACGGG...TTTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp TTATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAACCGCCCGCTTTCTCATaGGTAGAGTATGCCATGAAC +
Preference number: 4 (lower is better)
Translates to: LFTVTFSLALVHTARLCEPPAFS*VEYAMN
Trigger: GTTCATGGCATACTCTACGCATGAGAAAGCGGGCGG...TTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp TATACACCAGAAAGCAGCATTGGCCTCAAAGTACAATTAGTCCTTTTAGTTCAGCCGCCCGCTTTCTCATaGGTAGAGTATGCCATGAAC +
Preference number: 4 (lower is better)
Translates to: YTPESSIGLKVQLVLLVQPPAFS*VEYAMN
Trigger: GTTCATGGCATACTCTACGCATGAGAAAGCGGGCGG...CTGAACTAAAAGGACTAATTGTACTTTGAGGCCAATGCTGCTTTCTGGTGTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp CTGACGAGGTTTAAGAGGTACATCTCTCAATTCAGAGAACTGCACGGAGTGAAACCCGTGGTCATTTGTTaGTATGCAGGTATAAATCCC +
Preference number: 4 (lower is better)
Translates to: LTRFKRYISQFRELHGVKPVVIC*YAGINP
Trigger: GGGATTTATACCTGCATAGCAACAAATGACCACGGG...TTTCACTCCGTGCAGTTCTCTGAATTGAGAGATGTACCTCTTAAACCTCGTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp GTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACCAGGCCTTGCTGCTGGAACACCTTaGACTTTGACTGTTGCAGAC +
Preference number: 4 (lower is better)
Translates to: VMYQVLFHGFKKDLEPGLAAGTP*TLTVAD
Trigger: GTCTGCAACAGTCAAAGTGCAAGGTGTTCCAGCAGC...AAGGCCTGGTTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp AGCAGAAACTCAACTTGTTATAAAAACTCAGAATGGCTCAGCAGGGGGATCTTGAGAACTATCAGCGGCTaGATGGTGACAGGTATTGCA +
Preference number: 4 (lower is better)
Translates to: SRNSTCYKNSEWLSRGILRTISG*MVTGIA
Trigger: TGCAATACCTGTCACCATGCAGCCGCTGATAGTTCT...CAAGATCCCCCTGCTGAGCCATTCTGAGTTTTTATAACAAGTTGAGTTTCTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR GCA 90 bp CTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTCATGGACAGAACAGAACTTaGCAAGCTGGACTTTATGGA +
Preference number: 4 (lower is better)
Translates to: LSFQNNSELPVNLRGAFHGQNRT*QAGLYG
Trigger: TCCATAAAGTCCAGCTTGGCAAGTTCTGTTCTGTCC...ATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR GCA 90 bp TTATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAACTTGGGGGAATTCCATaGAACCCCACATCTGGATCC +
Preference number: 4 (lower is better)
Translates to: LFTVTFSLALVHTARLCELGGIP*NPTSGS
Trigger: GGATCCAGATGTGGGGTTGCATGGAATTCCCCCAAG...TTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR CCA 90 bp TATACACCAGAAAGCAGCATTGGCCTCAAAGTACAATTAGTCCTTTTAGTTCAGCCTCACTTGGCACGCTaGCCAAATACGTCACGAGTT +
Preference number: 4 (lower is better)
Translates to: YTPESSIGLKVQLVLLVQPHLAR*PNTSRV
Trigger: AACTCGTGACGTATTTGGCCAGCGTGCCAAGTGAGG...CTGAACTAAAAGGACTAATTGTACTTTGAGGCCAATGCTGCTTTCTGGTGTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp AAACTCTGTGTTTGGGGTTGGGGCTCTCTCTTGAGTGTGTTGGAAACTGGAGGAAATAACTCCTTGTTGTaGCTTATCCAGTCAAACATC +
Preference number: 4 (lower is better)
Translates to: KLCVWGWGSLLSVLETGGNNSLL*LIQSNI
Trigger: GATGTTTGACTGGATAAGCCACAACAAGGAGTTATT...TCCTCCAGTTTCCAACACACTCAAGAGAGAGCCCCAACCCCAAACACAGAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp GTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACCAGGCCTTAACTGCTCAGCCTTCTaGTGGAACACAGCAGACATG +
Preference number: 4 (lower is better)
Translates to: VMYQVLFHGFKKDLEPGLNCSAF*WNTADM
Trigger: CATGTCTGCTGTGTTCCACCAGAAGGCTGAGCAGTT...AAGGCCTGGTTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp TATACACCAGAAAGCAGCATTGGCCTCAAAGTACAATTAGTCCTTTTAGTTCAGGTCTTGCATCTCGGATaGCAGACCACCTTCACTGCA +
Preference number: 4 (lower is better)
Translates to: YTPESSIGLKVQLVLLVQVLHLG*QTTFTA
Trigger: TGCAGTGAAGGTGGTCTGCCATCCGAGATGCAAGAC...CTGAACTAAAAGGACTAATTGTACTTTGAGGCCAATGCTGCTTTCTGGTGTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp TATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAAAAGGTCTGGTGGTGGTaGATTGCCAGCTCTAGGTCT +
Preference number: 4 (lower is better)
Translates to: YLQSHSVLLWFTLHVYVKKVWWW*IASSRS
Trigger: AGACCTAGAGCTGGCAATCCACCACCACCAGACCTT...TTTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp TATACACCAGAAAGCAGCATTGGCCTCAAAGTACAATTAGTCCTTTTAGTTCAGAAGGTCTGGTGGTGGTaGATTGCCAGCTCTAGGTCT +
Preference number: 4 (lower is better)
Translates to: YTPESSIGLKVQLVLLVQKVWWW*IASSRS
Trigger: AGACCTAGAGCTGGCAATCCACCACCACCAGACCTT...CTGAACTAAAAGGACTAATTGTACTTTGAGGCCAATGCTGCTTTCTGGTGTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp GCCAGTGTTTGGGAAAGGCTAAAGTTAACCCTCATCTTCTCTACCACACATCATAGAAAGGCCTCACCATaGTTTTCAATCCAGTCCAAC +
Preference number: 4 (lower is better)
Translates to: ASVWERLKLTLIFSTTHHRKASP*FSIQSN
Trigger: GTTGGACTGGATTGAAAACCATGGTGAGGCCTTTCT...ATGATGTGTGGTAGAGAAGATGAGGGTTAACTTTAGCCTTTCCCAAACACTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp CTGACGAGGTTTAAGAGGTACATCTCTCAATTCAGAGAACTGCACGGAGTGAAAAGAAAGGCCTCACCATaGTTTTCAATCCAGTCCAAC +
Preference number: 4 (lower is better)
Translates to: LTRFKRYISQFRELHGVKRKASP*FSIQSN
Trigger: GTTGGACTGGATTGAAAACCATGGTGAGGCCTTTCT...TTTCACTCCGTGCAGTTCTCTGAATTGAGAGATGTACCTCTTAAACCTCGTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp ACAGATAAAGAAACCGAAGCTCACACAAGACCACAAAGCAAGATTTTGCTGAGTGGAGCTTGTCCGCATTaGTGTACGTATTCTGAGCCA +
Preference number: 4 (lower is better)
Translates to: TDKETEAHTRPQSKILLSGACPH*CTYSEP
Trigger: TGGCTCAGAATACGTACACCAATGCGGACAAGCTCC...ACTCAGCAAAATCTTGCTTTGTGGTCTTGTGTGAGCTTCGGTTTCTTTATCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439170.2
CDS-3UTR CCA 90 bp CTGACGAGGTTTAAGAGGTACATCTCTCAATTCAGAGAACTGCACGGAGTGAAATCTTTGGTGTGTGTGTaGAAGGAAACAGACATGTCC +
Preference number: 4 (lower is better)
Translates to: LTRFKRYISQFRELHGVKSLVCV*KETDMS
Trigger: GGACATGTCTGTTTCCTTCCACACACACACCAAAGA...TTTCACTCCGTGCAGTTCTCTGAATTGAGAGATGTACCTCTTAAACCTCGTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp CTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTCATTCTTTGGTGTGTGTGTaGAAGGAAACAGACATGTCC +
Preference number: 4 (lower is better)
Translates to: LSFQNNSELPVNLRGAFHSLVCV*KETDMS
Trigger: GGACATGTCTGTTTCCTTCCACACACACACCAAAGA...ATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp GCCAGTGTTTGGGAAAGGCTAAAGTTAACCCTCATCTTCTCTACCACACATCATTGCTTGATCAGTTCCTaGACTGCATCCACAGAATCT +
Preference number: 4 (lower is better)
Translates to: ASVWERLKLTLIFSTTHHCLISS*TASTES
Trigger: AGATTCTGTGGATGCAGTCCAGGAACTGATCAAGCA...ATGATGTGTGGTAGAGAAGATGAGGGTTAACTTTAGCCTTTCCCAAACACTGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp GTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACCAGGCCTTTCAATTCCTGATGCCTaGACCTCCGTGATGTACTGG +
Preference number: 4 (lower is better)
Translates to: VMYQVLFHGFKKDLEPGLSIPDA*TSVMYW
Trigger: CCAGTACATCACGGAGGTCCAGGCATCAGGAATTGA...AAGGCCTGGTTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp GCCAGTGTTTGGGAAAGGCTAAAGTTAACCCTCATCTTCTCTACCACACATCATAATAACTCTTGCACCTaGGCTGCCAGATCAATGTCT +
Preference number: 4 (lower is better)
Translates to: ASVWERLKLTLIFSTTHHNNSCT*AARSMS
Trigger: AGACATTGATCTGGCAGCCCAGGTGCAAGAGTTATT...ATGATGTGTGGTAGAGAAGATGAGGGTTAACTTTAGCCTTTCCCAAACACTGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp TCTGTTAGGGTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAAACCTGCAGGGCACTCTaGTGCGTCTTCTGCAAGGAA +
Preference number: 4 (lower is better)
Translates to: SVRVMYQVLFHGFKKDLETCRAL*CVFCKE
Trigger: TTCCTTGCAGAAGACGCACCAGAGTGCCCTGCAGGT...TTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCACCCTAACAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360013.7
CDS-3UTR CCA 90 bp TTATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAATGAGGGGAATGACATaGTCGATCTCTGCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: LFTVTFSLALVHTARLCEMRGMT*SISAAG
Trigger: GCCAGCAGCAGAGATCGACCATGTCATTCCCCTCAT...TTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp GCCAGTGTTTGGGAAAGGCTAAAGTTAACCCTCATCTTCTCTACCACACATCATCTGACGTTGTTCCTGTaGATGTACTTGAGAAACACC +
Preference number: 4 (lower is better)
Translates to: ASVWERLKLTLIFSTTHHLTLFL*MYLRNT
Trigger: GGTGTTTCTCAAGTACATCCACAGGAACAACGTCAG...ATGATGTGTGGTAGAGAAGATGAGGGTTAACTTTAGCCTTTCCCAAACACTGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp CATTTTAGACTTTGGAGAGAAGCTCAGCAACCTCGAATTGCACCCAGTAGAGAATGCTCCAGGATAAGCTaGTTGGAATCAGGCTTGTTT +
Preference number: 4 (lower is better)
Translates to: HFRLWREAQQPRIAPSRECSRIS*LESGLF
Trigger: AAACAAGCCTGATTCCAACCAGCTTATCCTGGAGCA...TTCTCTACTGGGTGCAATTCGAGGTTGCTGAGCTTCTCTCCAAAGTCTAAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp GCCAGTGTTTGGGAAAGGCTAAAGTTAACCCTCATCTTCTCTACCACACATCATTGCTCCAGGATAAGCTaGTTGGAATCAGGCTTGTTT +
Preference number: 4 (lower is better)
Translates to: ASVWERLKLTLIFSTTHHCSRIS*LESGLF
Trigger: AAACAAGCCTGATTCCAACCAGCTTATCCTGGAGCA...ATGATGTGTGGTAGAGAAGATGAGGGTTAACTTTAGCCTTTCCCAAACACTGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp CTGACGAGGTTTAAGAGGTACATCTCTCAATTCAGAGAACTGCACGGAGTGAAATCCGTTGATACTCAATaGGCGATTGCAGTGCATTCA +
Preference number: 4 (lower is better)
Translates to: LTRFKRYISQFRELHGVKSVDTQ*AIAVHS
Trigger: TGAATGCACTGCAATCGCCCATTGAGTATCAACGGA...TTTCACTCCGTGCAGTTCTCTGAATTGAGAGATGTACCTCTTAAACCTCGTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp TCTGTTAGGGTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAATGGCTTGGGGAAGCCTaGCAGGTTGAGACCTCATCA +
Preference number: 4 (lower is better)
Translates to: SVRVMYQVLFHGFKKDLEWLGEA*QVETSS
Trigger: TGATGAGGTCTCAACCTGCCAGGCTTCCCCAAGCCA...TTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCACCCTAACAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp GTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACCAGGCCTTAACTTGTCCCCAGGCTaGTGGTATTCAAACCCTGGA +
Preference number: 4 (lower is better)
Translates to: VMYQVLFHGFKKDLEPGLNLSPG*WYSNPG
Trigger: TCCAGGGTTTGAATACCACCAGCCTGGGGACAAGTT...AAGGCCTGGTTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp TATACACCAGAAAGCAGCATTGGCCTCAAAGTACAATTAGTCCTTTTAGTTCAGTGCCCAGAATATCCTTaGGTTTACGAGGCCCTGTGG +
Preference number: 4 (lower is better)
Translates to: YTPESSIGLKVQLVLLVQCPEYP*VYEALW
Trigger: CCACAGGGCCTCGTAAACCCAAGGATATTCTGGGCA...CTGAACTAAAAGGACTAATTGTACTTTGAGGCCAATGCTGCTTTCTGGTGTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp TCTGTTAGGGTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAAGCGGTTAGGGGCTGCTaGAACACCTTGCACTTTGAC +
Preference number: 4 (lower is better)
Translates to: SVRVMYQVLFHGFKKDLEAVRGC*NTLHFD
Trigger: GTCAAAGTGCAAGGTGTTCCAGCAGCCCCTAACCGC...TTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCACCCTAACAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp TTATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAGGCCGCACATCATTCTaGTGCTTGCGACGTTCTATG +
Preference number: 4 (lower is better)
Translates to: LFTVTFSLALVHTARLCEGRTSF*CLRRSM
Trigger: CATAGAACGTCGCAAGCACCAGAATGATGTGCGGCC...TTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp TATACACCAGAAAGCAGCATTGGCCTCAAAGTACAATTAGTCCTTTTAGTTCAGGATGGCTACGTCCCTTaGTTCACCCGGTTGACAATG +
Preference number: 4 (lower is better)
Translates to: YTPESSIGLKVQLVLLVQDGYVP*FTRLTM
Trigger: CATTGTCAACCGGGTGAACCAAGGGACGTAGCCATC...CTGAACTAAAAGGACTAATTGTACTTTGAGGCCAATGCTGCTTTCTGGTGTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp TTATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAGATGGCTACGTCCCTTaGTTCACCCGGTTGACAATG +
Preference number: 4 (lower is better)
Translates to: LFTVTFSLALVHTARLCEDGYVP*FTRLTM
Trigger: CATTGTCAACCGGGTGAACCAAGGGACGTAGCCATC...TTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp TCAGGTCATCCACAGTGGACAGAACAGAACTTGCCAAGCTGGACTTTATGGATACATTCAGTCTTGCTTTaGTTCACACTGCACGTCTAT +
Preference number: 4 (lower is better)
Translates to: SGHPQWTEQNLPSWTLWIHSVLL*FTLHVY
Trigger: ATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATG...TATCCATAAAGTCCAGCTTGGCAAGTTCTGTTCTGTCCACTGTGGATGACCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR CCA 90 bp TCAGGTCATCCACAGTGGACAGAACAGAACTTGCCAAGCTGGACTTTATGGATAGCTGATATGAAAGCTTaGGGTCTGTCTAACATTCTG +
Preference number: 4 (lower is better)
Translates to: SGHPQWTEQNLPSWTLWIADMKA*GLSNIL
Trigger: CAGAATGTTAGACAGACCCCAAGCTTTCATATCAGC...TATCCATAAAGTCCAGCTTGGCAAGTTCTGTTCTGTCCACTGTGGATGACCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR CCA 90 bp ATGTGCGATGGTCCCTATGGGGAAACCTGTCCACTTATGAATAAGGCCCTTTGTGAAGAAAGTGGTTGTTaGGTTCTTCTCTGTCCTTTT +
Preference number: 4 (lower is better)
Translates to: MCDGPYGETCPLMNKALCEESGC*VLLCPF
Trigger: AAAAGGACAGAGAAGAACCCAACAACCACTTTCTTC...ACAAAGGGCCTTATTCATAAGTGGACAGGTTTCCCCATAGGGACCATCGCACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR CCA 90 bp AGCAGAAACTCAACTTGTTATAAAAACTCAGAATGGCTCAGCAGGGGGATCTTGTATGATGGCCATCCCTaGGCCAACAAATTAGCTTGG +
Preference number: 4 (lower is better)
Translates to: SRNSTCYKNSEWLSRGILYDGHP*ANKLAW
Trigger: CCAAGCTAATTTGTTGGCCCAGGGATGGCCATCATA...CAAGATCCCCCTGCTGAGCCATTCTGAGTTTTTATAACAAGTTGAGTTTCTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR CCA 90 bp CTGACGAGGTTTAAGAGGTACATCTCTCAATTCAGAGAACTGCACGGAGTGAAATATGTATATGTGCGATaGTCCCTATGGGGAAACCTG +
Preference number: 4 (lower is better)
Translates to: LTRFKRYISQFRELHGVKYVYVR*SLWGNL
Trigger: CAGGTTTCCCCATAGGGACCATCGCACATATACATA...TTTCACTCCGTGCAGTTCTCTGAATTGAGAGATGTACCTCTTAAACCTCGTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291478.9
3UTR CAA 72 bp ATATATGAAATGGAATCATCATCTCTGCCTCTTGCCTaGGTGTGGGGTTTCCATGAAACTCTGTGTTTGGGG +
Preference number: 4 (lower is better)
Translates to: IYEMESSSLPLA*VWGFHETLCLG
Trigger: CCCCAAACACAGAGTTTCATGGAAACCCCACACCAAGGCAAGAGGCAGAGATGATGATTCCATTTCATATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
3UTR CAA 72 bp TTCTTTGTGAATCTCAAGTTGAGGGGCCAAAAGAAGTaGAGTTCCAAGTTCCTTCCAACTCCCACACCTTCA +
Preference number: 4 (lower is better)
Translates to: FFVNLKLRGQKK*SSKFLPTPTPS
Trigger: TGAAGGTGTGGGAGTTGGAAGGAACTTGGAACTCAACTTCTTTTGGCCCCTCAACTTGAGATTCACAAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483658.1
CDS-3UTR TCA 90 bp TTATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAACTGCTTGATTTGTTGTaGGGCATAATGACCGGCCTC +
Preference number: 4 (lower is better)
Translates to: LFTVTFSLALVHTARLCELLDLL*GIMTGL
Trigger: GAGGCCGGTCATTATGCCTCACAACAAATCAAGCAG...TTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp CAGCAATTCTCAGTCATGCAAATGCCCGTGTTAAAGTTCTCCATTGGATTTAAAGAGTCTGCTCTGCATTaGGCTCCAATTCATGCTGCT +
Preference number: 4 (lower is better)
Translates to: QQFSVMQMPVLKFSIGFKESALH*APIHAA
Trigger: AGCAGCATGAATTGGAGCTCAATGCAGAGCAGACTC...TTTAAATCCAATGGAGAACTTTAACACGGGCATTTGCATGACTGAGAATTGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR TCA 90 bp GCCAGTGTTTGGGAAAGGCTAAAGTTAACCCTCATCTTCTCTACCACACATCATAGTGGAGGTATGTGTTaGGAGGTAAAATTCACCTGT +
Preference number: 4 (lower is better)
Translates to: ASVWERLKLTLIFSTTHHSGGMC*EVKFTC
Trigger: ACAGGTGAATTTTACCTCTCAACACATACCTCCACT...ATGATGTGTGGTAGAGAAGATGAGGGTTAACTTTAGCCTTTCCCAAACACTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR TCA 90 bp TTATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAATCTTTCAGCAGTTCCTaGGTCTCCTCTGTGGTCTCT +
Preference number: 4 (lower is better)
Translates to: LFTVTFSLALVHTARLCESFSSS*VSSVVS
Trigger: AGAGACCACAGAGGAGACTCAGGAACTGCTGAAAGA...TTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp TATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAATCTTTCAGCAGTTCCTaGGTCTCCTCTGTGGTCTCT +
Preference number: 4 (lower is better)
Translates to: YLQSHSVLLWFTLHVYVKSFSSS*VSSVVS
Trigger: AGAGACCACAGAGGAGACTCAGGAACTGCTGAAAGA...TTTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp TATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAAGCTTGGCAGGCACCCTaGATTCCCCATATTCTTTCA +
Preference number: 4 (lower is better)
Translates to: YLQSHSVLLWFTLHVYVKAWQAP*IPHILS
Trigger: TGAAAGAATATGGGGAATTCAGGGTGCCTGCCAAGC...TTTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp TTATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAAAGCTATCGGCCAGCTaGATCAGAAGCTTCACCTTC +
Preference number: 4 (lower is better)
Translates to: LFTVTFSLALVHTARLCEKLSAS*IRSFTF
Trigger: GAAGGTGAAGCTTCTGATTCAGCTGGCCGATAGCTT...TTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp CATTTTAGACTTTGGAGAGAAGCTCAGCAACCTCGAATTGCACCCAGTAGAGAAACTTCTCCAGCTCTTTaGGGAAGATGTTGTTATGGA +
Preference number: 4 (lower is better)
Translates to: HFRLWREAQQPRIAPSRETSPAL*GRCCYG
Trigger: TCCATAACAACATCTTCCTCAAAGAGCTGGAGAAGT...TTCTCTACTGGGTGCAATTCGAGGTTGCTGAGCTTCTCTCCAAAGTCTAAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR TCA 90 bp TTATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAGGTGTTTTGGGGAGCTaGAGTGGCTCCTTTAAAGCT +
Preference number: 4 (lower is better)
Translates to: LFTVTFSLALVHTARLCEGVLGS*SGSFKA
Trigger: AGCTTTAAAGGAGCCACTTCAGCTCCCCAAAACACC...TTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp TATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAAGCCTCCATTCTCGCTTaGGGAATGAGAGTATGCATC +
Preference number: 4 (lower is better)
Translates to: YLQSHSVLLWFTLHVYVKASILA*GMRVCI
Trigger: GATGCATACTCTCATTCCTCAAGCGAGAATGGAGGC...TTTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp TATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAAAGCAACGATGTACTCTaGGCGCGGCTTATTCTGACA +
Preference number: 4 (lower is better)
Translates to: YLQSHSVLLWFTLHVYVKSNDVL*ARLILT
Trigger: TGTCAGAATAAGCCGCGCTCAGAGTACATCGTTGCT...TTTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp TATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAAGACCGTGTATGTGGCTaGGCTGTTATCAGTGTCAAG +
Preference number: 4 (lower is better)
Translates to: YLQSHSVLLWFTLHVYVKDRVCG*AVISVK
Trigger: CTTGACACTGATAACAGCTCAGCCACATACACGGTC...TTTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp TCTGTTAGGGTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAAGACTGTTGCAGACGTTaGTGTGGTCCCGTGGTCATT +
Preference number: 4 (lower is better)
Translates to: SVRVMYQVLFHGFKKDLEDCCRR*CGPVVI
Trigger: AATGACCACGGGACCACATCAACGTCTGCAACAGTC...TTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCACCCTAACAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp AAGGAAGAAGGTCTACATTCCTCGAAACTCATCCAGCACAATTCATTGACCATAGAACACCTTGCACTTTaGCTGTTGCAGACGTTGATG +
Preference number: 4 (lower is better)
Translates to: KEEGLHSSKLIQHNSLTIEHLAL*LLQTLM
Trigger: CATCAACGTCTGCAACAGTCAAAGTGCAAGGTGTTC...TATGGTCAATGAATTGTGCTGGATGAGTTTCGAGGAATGTAGACCTTCTTCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR TCA 90 bp ATCAATTGTTACAAGCCTGATGGAAGTATGTACTTATATGTATATGTGCGATGGCGGGGATGCCTTGAATaGCTTCTGGGGCAGCAAACT +
Preference number: 4 (lower is better)
Translates to: INCYKPDGSMYLYVYVRWRGCLE*LLGQQT
Trigger: AGTTTGCTGCCCCAGAAGTCATTCAAGGCATCCCCG...CCATCGCACATATACATATAAGTACATACTTCCATCAGGCTTGTAACAATTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR TCA 90 bp TTATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAACCACCCTGCATACGTTaGTACATGTCTCCTCTTTGC +
Preference number: 4 (lower is better)
Translates to: LFTVTFSLALVHTARLCEPPCIR*YMSPLC
Trigger: GCAAAGAGGAGACATGTATCAACGTATGCAGGGTGG...TTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp TATACACCAGAAAGCAGCATTGGCCTCAAAGTACAATTAGTCCTTTTAGTTCAGATTCATGGGGGAAGCTaGAATCCACCCTGCATACGT +
Preference number: 4 (lower is better)
Translates to: YTPESSIGLKVQLVLLVQIHGGS*NPPCIR
Trigger: ACGTATGCAGGGTGGATTTCAGCTTCCCCCATGAAT...CTGAACTAAAAGGACTAATTGTACTTTGAGGCCAATGCTGCTTTCTGGTGTATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp ATTCAGGTCATCCACAGTGGACAGAACAGAACTTGCCAAGCTGGACTTTATGGAGAGAACTGCACGGAGTaGAATGATGAACAGAATTAT +
Preference number: 4 (lower is better)
Translates to: IQVIHSGQNRTCQAGLYGENCTE*NDEQNY
Trigger: ATAATTCTGTTCATCATTTCACTCCGTGCAGTTCTC...TCCATAAAGTCCAGCTTGGCAAGTTCTGTTCTGTCCACTGTGGATGACCTGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR TCA 90 bp TCTGTTAGGGTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAATCAGCAGGGGGATCTTaGTTCAGGTCATCCACAGTG +
Preference number: 4 (lower is better)
Translates to: SVRVMYQVLFHGFKKDLESAGGS*FRSSTV
Trigger: CACTGTGGATGACCTGAATCAAGATCCCCCTGCTGA...TTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCACCCTAACAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR TCA 90 bp TCAGGTCATCCACAGTGGACAGAACAGAACTTGCCAAGCTGGACTTTATGGATACATGGATTCAGTTGTTaGTGGAAGTCAGGTATTGAT +
Preference number: 4 (lower is better)
Translates to: SGHPQWTEQNLPSWTLWIHGFSC*WKSGID
Trigger: ATCAATACCTGACTTCCATCAACAACTGAATCCATG...TATCCATAAAGTCCAGCTTGGCAAGTTCTGTTCTGTCCACTGTGGATGACCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR TCA 90 bp TTGACCATACTGAATAAGGACATGGTGAGTTTGAACTTTGCCCTACTACAAAGATGTCTGAATGGCCAGTaGAGCCCACTCCAAATTCTC +
Preference number: 4 (lower is better)
Translates to: LTILNKDMVSLNFALLQRCLNGQ*SPLQIL
Trigger: GAGAATTTGGAGTGGGCTTCACTGGCCATTCAGACA...TCTTTGTAGTAGGGCAAAGTTCAAACTCACCATGTCCTTATTCAGTATGGTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR GCA 90 bp CAGCAATTCTCAGTCATGCAAATGCCCGTGTTAAAGTTCTCCATTGGATTTAAAATCCAGTCCAACACCTaGTGTACATCCTGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: QQFSVMQMPVLKFSIGFKIQSNT*CTSCWK
Trigger: CTTCCAGCAGGATGTACAGCAGGTGTTGGACTGGAT...TTTAAATCCAATGGAGAACTTTAACACGGGCATTTGCATGACTGAGAATTGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp TATACACCAGAAAGCAGCATTGGCCTCAAAGTACAATTAGTCCTTTTAGTTCAGATCCAGTCCAACACCTaGTGTACATCCTGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: YTPESSIGLKVQLVLLVQIQSNT*CTSCWK
Trigger: CTTCCAGCAGGATGTACAGCAGGTGTTGGACTGGAT...CTGAACTAAAAGGACTAATTGTACTTTGAGGCCAATGCTGCTTTCTGGTGTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp GATAAAGAAACCGAAGCTCACACAAGACCACAAAGCAAGATTTTGCTGAGTCAAGATCAGTTCCTGGACTaGATCCACAGAATCTGCACA +
Preference number: 4 (lower is better)
Translates to: DKETEAHTRPQSKILLSQDQFLD*IHRICT
Trigger: TGTGCAGATTCTGTGGATGCAGTCCAGGAACTGATC...TTGACTCAGCAAAATCTTGCTTTGTGGTCTTGTGTGAGCTTCGGTTTCTTTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439170.2
CDS-3UTR GCA 90 bp TTATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAATGCTGCTGCTGGAACTaGTTGATCAGTTCCTGGACT +
Preference number: 4 (lower is better)
Translates to: LFTVTFSLALVHTARLCECCCWN*LISSWT
Trigger: AGTCCAGGAACTGATCAAGCAGTTCCAGCAGCAGCA...TTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp TTATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAACCTCGATGGTGTACTaGTCAAAGATGCGCAGTTGC +
Preference number: 4 (lower is better)
Translates to: LFTVTFSLALVHTARLCETSMVY*SKMRSC
Trigger: GCAACTGCGCATCTTTGAGCAGTACACCATCGAGGT...TTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp TATACACCAGAAAGCAGCATTGGCCTCAAAGTACAATTAGTCCTTTTAGTTCAGACCTCGATGGTGTACTaGTCAAAGATGCGCAGTTGC +
Preference number: 4 (lower is better)
Translates to: YTPESSIGLKVQLVLLVQTSMVY*SKMRSC
Trigger: GCAACTGCGCATCTTTGAGCAGTACACCATCGAGGT...CTGAACTAAAAGGACTAATTGTACTTTGAGGCCAATGCTGCTTTCTGGTGTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp TATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAATGCAGATCCTGTCCCTaGTGGATAACCTCAAAGGTC +
Preference number: 4 (lower is better)
Translates to: YLQSHSVLLWFTLHVYVKCRSCP*WITSKV
Trigger: GACCTTTGAGGTTATCCAGCAGGGACAGGATCTGCA...TTTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp CTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTCATCTTATGAGTCTGCTCTaGATTGAGCTCCAATTCATG +
Preference number: 4 (lower is better)
Translates to: LSFQNNSELPVNLRGAFHLMSLL*IELQFM
Trigger: CATGAATTGGAGCTCAATGCAGAGCAGACTCATAAG...ATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp GTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACCAGGCCTTTCGAACACCACATATTaGTGGCATTGGTCTAACCGC +
Preference number: 4 (lower is better)
Translates to: VMYQVLFHGFKKDLEPGLSNTTY*WHWSNR
Trigger: GCGGTTAGACCAATGCCAGCAATATGTGGTGTTCGA...AAGGCCTGGTTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp TTATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAACCGATCCGAAAGGCTTaGTGGGATAATATCCAGCTC +
Preference number: 4 (lower is better)
Translates to: LFTVTFSLALVHTARLCEPIRKA*WDNIQL
Trigger: GAGCTGGATATTATCCCAGCAAGCCTTTCGGATCGG...TTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp CAGCAATTCTCAGTCATGCAAATGCCCGTGTTAAAGTTCTCCATTGGATTTAAACCGATCCGAAAGGCTTaGTGGGATAATATCCAGCTC +
Preference number: 4 (lower is better)
Translates to: QQFSVMQMPVLKFSIGFKPIRKA*WDNIQL
Trigger: GAGCTGGATATTATCCCAGCAAGCCTTTCGGATCGG...TTTAAATCCAATGGAGAACTTTAACACGGGCATTTGCATGACTGAGAATTGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp CAGCAATTCTCAGTCATGCAAATGCCCGTGTTAAAGTTCTCCATTGGATTTAAAACATCCTCAGGCAGTTaGTCGTACTTCTCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: QQFSVMQMPVLKFSIGFKTSSGS*SYFSSS
Trigger: AGAGCTGGAGAAGTACGAGCAACTGCCTGAGGATGT...TTTAAATCCAATGGAGAACTTTAACACGGGCATTTGCATGACTGAGAATTGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp TATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAAGAGTTGGCCAGACCATaGCGCTGTTGTATCTCATCA +
Preference number: 4 (lower is better)
Translates to: YLQSHSVLLWFTLHVYVKELARP*RCCISS
Trigger: TGATGAGATACAACAGCGGCATGGTCTGGCCAACTC...TTTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp TCTGTTAGGGTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAAAGAATCAACTCCCCCTaGACATCCAGGTTCTCGTCG +
Preference number: 4 (lower is better)
Translates to: SVRVMYQVLFHGFKKDLERINSP*TSRFSS
Trigger: CGACGAGAACCTGGATGTGCAGGGGGAGTTGATTCT...TTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCACCCTAACAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp CATTTTAGACTTTGGAGAGAAGCTCAGCAACCTCGAATTGCACCCAGTAGAGAATTCTTGATCCACTCCTaGTTGGTTTCAATGTTGGAG +
Preference number: 4 (lower is better)
Translates to: HFRLWREAQQPRIAPSREFLIHS*LVSMLE
Trigger: CTCCAACATTGAAACCAAGCAGGAGTGGATCAAGAA...TTCTCTACTGGGTGCAATTCGAGGTTGCTGAGCTTCTCTCCAAAGTCTAAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp GCCAGTGTTTGGGAAAGGCTAAAGTTAACCCTCATCTTCTCTACCACACATCATTTCTTGATCCACTCCTaGTTGGTTTCAATGTTGGAG +
Preference number: 4 (lower is better)
Translates to: ASVWERLKLTLIFSTTHHFLIHS*LVSMLE
Trigger: CTCCAACATTGAAACCAAGCAGGAGTGGATCAAGAA...ATGATGTGTGGTAGAGAAGATGAGGGTTAACTTTAGCCTTTCCCAAACACTGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp CAGCAATTCTCAGTCATGCAAATGCCCGTGTTAAAGTTCTCCATTGGATTTAAATGGAATCATCATCTCTaGCTCTTGCCTTGGTGTGGG +
Preference number: 4 (lower is better)
Translates to: QQFSVMQMPVLKFSIGFKWNHHL*LLPWCG
Trigger: CCCACACCAAGGCAAGAGGCAGAGATGATGATTCCA...TTTAAATCCAATGGAGAACTTTAACACGGGCATTTGCATGACTGAGAATTGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp TATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAACACCCCAACCTTTCTTaGTCTTCTCATCAGCGCTGT +
Preference number: 4 (lower is better)
Translates to: YLQSHSVLLWFTLHVYVKHPNLS*SSHQRC
Trigger: ACAGCGCTGATGAGAAGAGCAAGAAAGGTTGGGGTG...TTTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp CCCAGGATCATCATCATCTGGGATTCCTTGTTATTTCCAACTTGCTGTGGAGAAGACCAACTTTTCTATTaGATTGACAAGGTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: PRIIIIWDSLLFPTCCGEDQLFY*IDKVCS
Trigger: GCTGCAGACCTTGTCAATGCAATAGAAAAGTTGGTC...TTCTCCACAGCAAGTTGGAAATAACAAGGAATCCCAGATGATGATGATCCTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR GCA 90 bp TATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAACTGAAGATGACAATCTaGTCGAAGAGGAACACGCGC +
Preference number: 4 (lower is better)
Translates to: YLQSHSVLLWFTLHVYVKLKMTI*SKRNTR
Trigger: GCGCGTGTTCCTCTTCGAGCAGATTGTCATCTTCAG...TTTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp TATACACCAGAAAGCAGCATTGGCCTCAAAGTACAATTAGTCCTTTTAGTTCAGCCACAGACTTTGCACTaGAGTATCACTGTGTCCCCA +
Preference number: 4 (lower is better)
Translates to: YTPESSIGLKVQLVLLVQPQTLH*SITVSP
Trigger: TGGGGACACAGTGATACTGCAGTGCAAAGTCTGTGG...CTGAACTAAAAGGACTAATTGTACTTTGAGGCCAATGCTGCTTTCTGGTGTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp TCTGTTAGGGTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAAGCCGCCCACAGACTTTaGACTGCAGTATCACTGTGT +
Preference number: 4 (lower is better)
Translates to: SVRVMYQVLFHGFKKDLEAAHRL*TAVSLC
Trigger: ACACAGTGATACTGCAGTGCAAAGTCTGTGGGCGGC...TTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCACCCTAACAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp AGCAGAAACTCAACTTGTTATAAAAACTCAGAATGGCTCAGCAGGGGGATCTTGCCCGTGGTCATTTGTTaGTATGCAGGTATAAATCCC +
Preference number: 4 (lower is better)
Translates to: SRNSTCYKNSEWLSRGILPVVIC*YAGINP
Trigger: GGGATTTATACCTGCATAGCAACAAATGACCACGGG...CAAGATCCCCCTGCTGAGCCATTCTGAGTTTTTATAACAAGTTGAGTTTCTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR GCA 90 bp CTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTCATCTTTATGTCCAAATGTaGAACCCTGCAGTTGTGAAG +
Preference number: 4 (lower is better)
Translates to: LSFQNNSELPVNLRGAFHLYVQM*NPAVVK
Trigger: CTTCACAACTGCAGGGTTGCACATTTGGACATAAAG...ATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp CTGACGAGGTTTAAGAGGTACATCTCTCAATTCAGAGAACTGCACGGAGTGAAAAATCTCTGGCAGCATTaGTCACACCACAGAAGTATT +
Preference number: 4 (lower is better)
Translates to: LTRFKRYISQFRELHGVKNLWQH*SHHRSI
Trigger: AATACTTCTGTGGTGTGAGCAATGCTGCCAGAGATT...TTTCACTCCGTGCAGTTCTCTGAATTGAGAGATGTACCTCTTAAACCTCGTCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp TATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAAGCTAGCTTTCTCCTCTaGTTCCTCTACTCCCCCTTA +
Preference number: 4 (lower is better)
Translates to: YLQSHSVLLWFTLHVYVKASFLL*FLYSPL
Trigger: TAAGGGGGAGTAGAGGAAGCAGAGGAGAAAGCTAGC...TTTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR GCA 90 bp GCTCCCTCATATTCTCACAAATCTAAATTGCCATGCTCTTCCACAGAGGCAAGACTCACAAATCTAAATTaGCATGCTCTTCCACAGAGG +
Preference number: 4 (lower is better)
Translates to: APSYSHKSKLPCSSTEARLTNLN*HALPQR
Trigger: CCTCTGTGGAAGAGCATGGCAATTTAGATTTGTGAG...TCTTGCCTCTGTGGAAGAGCATGGCAATTTAGATTTGTGAGAATATGAGGGAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR GCA 90 bp ATCAATTGTTACAAGCCTGATGGAAGTATGTACTTATATGTATATGTGCGATGGCAGACTCCACAGAGGTaGGACCCAGGAGAGAAAGGA +
Preference number: 4 (lower is better)
Translates to: INCYKPDGSMYLYVYVRWQTPQR*DPGEKG
Trigger: TCCTTTCTCTCCTGGGTCGCACCTCTGTGGAGTCTG...CCATCGCACATATACATATAAGTACATACTTCCATCAGGCTTGTAACAATTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR GCA 90 bp GTAAAAGCTGATATGAAAGCTTGGGGTCTGTCTAACATTCTGTCAACTGCCCCCGCATTTCTTCTACCATaGTTCCTTTTCTCAGCTAAC +
Preference number: 4 (lower is better)
Translates to: VKADMKAWGLSNILSTAPAFLLP*FLFSAN
Trigger: GTTAGCTGAGAAAAGGAAGCATGGTAGAAGAAATGC...GGGGGCAGTTGACAGAATGTTAGACAGACCCCAAGCTTTCATATCAGCTTTTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR CCA 90 bp GTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACCAGGCCTTATCTCCGTGTGGCTCTaGAGGAATAACTCCTTGTTG +
Preference number: 4 (lower is better)
Translates to: VMYQVLFHGFKKDLEPGLISVWL*RNNSLL
Trigger: CAACAAGGAGTTATTCCTCCAGAGCCACACGGAGAT...AAGGCCTGGTTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp TCTGTTAGGGTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAAACTCCGATCTCCGTGTaGCTCTGGAGGAATAACTCC +
Preference number: 4 (lower is better)
Translates to: SVRVMYQVLFHGFKKDLETPISV*LWRNNS
Trigger: GGAGTTATTCCTCCAGAGCCACACGGAGATCGGAGT...TTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCACCCTAACAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp TCTGTTAGGGTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAAGTCTTGCATCTCGGATaGCAGACCACCTTCACTGCA +
Preference number: 4 (lower is better)
Translates to: SVRVMYQVLFHGFKKDLEVLHLG*QTTFTA
Trigger: TGCAGTGAAGGTGGTCTGCCATCCGAGATGCAAGAC...TTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCACCCTAACAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp TCTGTTAGGGTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAATACAAGGTCTGGTGGTaGTGGATTGCCAGCTCTAGG +
Preference number: 4 (lower is better)
Translates to: SVRVMYQVLFHGFKKDLEYKVWW*WIASSR
Trigger: CCTAGAGCTGGCAATCCACCACCACCAGACCTTGTA...TTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCACCCTAACAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp TATACACCAGAAAGCAGCATTGGCCTCAAAGTACAATTAGTCCTTTTAGTTCAGTCATACAAGGTCTGGTaGTGGTGGATTGCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: YTPESSIGLKVQLVLLVQSYKVW*WWIASS
Trigger: AGAGCTGGCAATCCACCACCACCAGACCTTGTATGA...CTGAACTAAAAGGACTAATTGTACTTTGAGGCCAATGCTGCTTTCTGGTGTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp TCTGTTAGGGTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAATGCTCATACAAGGTCTaGTGGTGGTGGATTGCCAGC +
Preference number: 4 (lower is better)
Translates to: SVRVMYQVLFHGFKKDLECSYKV*WWWIAS
Trigger: GCTGGCAATCCACCACCACCAGACCTTGTATGAGCA...TTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCACCCTAACAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp TTATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAGGAGCTTGTCCGCATTaGTGTACGTATTCTGAGCCA +
Preference number: 4 (lower is better)
Translates to: LFTVTFSLALVHTARLCEGACPH*CTYSEP
Trigger: TGGCTCAGAATACGTACACCAATGCGGACAAGCTCC...TTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp TATACACCAGAAAGCAGCATTGGCCTCAAAGTACAATTAGTCCTTTTAGTTCAGCTGCTGTCACCTCGATaGTGTACTGCTCAAAGATGC +
Preference number: 4 (lower is better)
Translates to: YTPESSIGLKVQLVLLVQLLSPR*CTAQRC
Trigger: GCATCTTTGAGCAGTACACCATCGAGGTGACAGCAG...CTGAACTAAAAGGACTAATTGTACTTTGAGGCCAATGCTGCTTTCTGGTGTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp TTATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAACTGCTGTCACCTCGATaGTGTACTGCTCAAAGATGC +
Preference number: 4 (lower is better)
Translates to: LFTVTFSLALVHTARLCELLSPR*CTAQRC
Trigger: GCATCTTTGAGCAGTACACCATCGAGGTGACAGCAG...TTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp TCTGTTAGGGTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAAGGAGCTCACTCAGGATaGCTTTCACTTGTTGCTCGG +
Preference number: 4 (lower is better)
Translates to: SVRVMYQVLFHGFKKDLEGAHSG*LSLVAR
Trigger: CCGAGCAACAAGTGAAAGCCATCCTGAGTGAGCTCC...TTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCACCCTAACAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp TATACACCAGAAAGCAGCATTGGCCTCAAAGTACAATTAGTCCTTTTAGTTCAGAACACCACATATTGCTaGCATTGGTCTAACCGCCGC +
Preference number: 4 (lower is better)
Translates to: YTPESSIGLKVQLVLLVQNTTYC*HWSNRR
Trigger: GCGGCGGTTAGACCAATGCCAGCAATATGTGGTGTT...CTGAACTAAAAGGACTAATTGTACTTTGAGGCCAATGCTGCTTTCTGGTGTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp TATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAACTGTGGTCTCTCCAGTaGAGGTATGTGTTGAGAGGT +
Preference number: 4 (lower is better)
Translates to: YLQSHSVLLWFTLHVYVKLWSLQ*RYVLRG
Trigger: ACCTCTCAACACATACCTCCACTGGAGAGACCACAG...TTTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp TCTGTTAGGGTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACCTGAGTCTCCTCTGTaGTCTCTCCAGTGGAGGTAT +
Preference number: 4 (lower is better)
Translates to: SVRVMYQVLFHGFKKDLEPESPL*SLQWRY
Trigger: ATACCTCCACTGGAGAGACCACAGAGGAGACTCAGG...TTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCACCCTAACAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp GTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACCAGGCCTTAGTGCTTGTCCACCGTaGTCACCCATTTCCTTATCT +
Preference number: 4 (lower is better)
Translates to: VMYQVLFHGFKKDLEPGLSACPP*SPISLS
Trigger: AGATAAGGAAATGGGTGACCACGGTGGACAAGCACT...AAGGCCTGGTTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp TCTGTTAGGGTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAATCTTCATTGACTTCGTaGTTGGCGTCCCGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: SVRVMYQVLFHGFKKDLESSLTS*LASRSL
Trigger: CAAGCTGCGGGACGCCAACCACGAAGTCAATGAAGA...TTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCACCCTAACAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp TTATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAATTAGGTAGGAAGAGATaGAGTTGGCCAGACCATGCC +
Preference number: 4 (lower is better)
Translates to: LFTVTFSLALVHTARLCELGRKR*SWPDHA
Trigger: GGCATGGTCTGGCCAACTCCATCTCTTCCTACCTAA...TTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp CTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTCATGCTTGGTTTCAATGTTaGAGGCTTTCAGCACTGTTT +
Preference number: 4 (lower is better)
Translates to: LSFQNNSELPVNLRGAFHAWFQC*RLSALF
Trigger: AAACAGTGCTGAAAGCCTCCAACATTGAAACCAAGC...ATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp GCCAGTGTTTGGGAAAGGCTAAAGTTAACCCTCATCTTCTCTACCACACATCATGCTTGGTTTCAATGTTaGAGGCTTTCAGCACTGTTT +
Preference number: 4 (lower is better)
Translates to: ASVWERLKLTLIFSTTHHAWFQC*RLSALF
Trigger: AAACAGTGCTGAAAGCCTCCAACATTGAAACCAAGC...ATGATGTGTGGTAGAGAAGATGAGGGTTAACTTTAGCCTTTCCCAAACACTGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp TATACACCAGAAAGCAGCATTGGCCTCAAAGTACAATTAGTCCTTTTAGTTCAGGTTCCTCTGTTTGGCTaGTGTTTTGGGGAGCTGAAG +
Preference number: 4 (lower is better)
Translates to: YTPESSIGLKVQLVLLVQVPLFG*CFGELK
Trigger: CTTCAGCTCCCCAAAACACCAGCCAAACAGAGGAAC...CTGAACTAAAAGGACTAATTGTACTTTGAGGCCAATGCTGCTTTCTGGTGTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp CAGCAATTCTCAGTCATGCAAATGCCCGTGTTAAAGTTCTCCATTGGATTTAAACCTCTTGCCTTGGTGTaGGGTTTCCATGAAACTCTG +
Preference number: 4 (lower is better)
Translates to: QQFSVMQMPVLKFSIGFKPLALV*GFHETL
Trigger: CAGAGTTTCATGGAAACCCCACACCAAGGCAAGAGG...TTTAAATCCAATGGAGAACTTTAACACGGGCATTTGCATGACTGAGAATTGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp ATCAATTGTTACAAGCCTGATGGAAGTATGTACTTATATGTATATGTGCGATGGTTTAGGAGGTGTGGGTaGGGCCATCCCCTCATTCAG +
Preference number: 4 (lower is better)
Translates to: INCYKPDGSMYLYVYVRWFRRCG*GHPLIQ
Trigger: CTGAATGAGGGGATGGCCCCACCCACACCTCCTAAA...CCATCGCACATATACATATAAGTACATACTTCCATCAGGCTTGTAACAATTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR CCA 90 bp CCCAGGATCATCATCATCTGGGATTCCTTGTTATTTCCAACTTGCTGTGGAGAATTTCTGTTCTTCTTCTaGGTTTTTAGGAGGTGTGGG +
Preference number: 4 (lower is better)
Translates to: PRIIIIWDSLLFPTCCGEFLFFF*VFRRCG
Trigger: CCCACACCTCCTAAAAACCCAGAAGAAGAACAGAAA...TTCTCCACAGCAAGTTGGAAATAACAAGGAATCCCAGATGATGATGATCCTGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR CCA 90 bp CTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTCATTTTCTGTTCTTCTTCTaGGTTTTTAGGAGGTGTGGG +
Preference number: 4 (lower is better)
Translates to: LSFQNNSELPVNLRGAFHFLFFF*VFRRCG
Trigger: CCCACACCTCCTAAAAACCCAGAAGAAGAACAGAAA...ATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp GTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACCAGGCCTTGTGGTATTCAAACCCTaGACTGCCATTGGAGGTAGA +
Preference number: 4 (lower is better)
Translates to: VMYQVLFHGFKKDLEPGLVVFKP*TAIGGR
Trigger: TCTACCTCCAATGGCAGTCCAGGGTTTGAATACCAC...AAGGCCTGGTTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp TCTGTTAGGGTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAATTGTCCCCAGGCTGGTaGTATTCAAACCCTGGACTG +
Preference number: 4 (lower is better)
Translates to: SVRVMYQVLFHGFKKDLELSPGW*YSNPGL
Trigger: CAGTCCAGGGTTTGAATACCACCAGCCTGGGGACAA...TTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCACCCTAACAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp TTATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAAACTTGTCCCCAGGCTaGTGGTATTCAAACCCTGGA +
Preference number: 4 (lower is better)
Translates to: LFTVTFSLALVHTARLCENLSPG*WYSNPG
Trigger: TCCAGGGTTTGAATACCACCAGCCTGGGGACAAGTT...TTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp GTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACCAGGCCTTTGGACCACCTCACCTTaGCTCACACAGATTTCATTC +
Preference number: 4 (lower is better)
Translates to: VMYQVLFHGFKKDLEPGLWTTSP*LTQISF
Trigger: GAATGAAATCTGTGTGAGCCAAGGTGAGGTGGTCCA...AAGGCCTGGTTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp TCTGTTAGGGTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAATGCCCAGAATATCCTTaGGTTTACGAGGCCCTGTGG +
Preference number: 4 (lower is better)
Translates to: SVRVMYQVLFHGFKKDLECPEYP*VYEALW
Trigger: CCACAGGGCCTCGTAAACCCAAGGATATTCTGGGCA...TTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCACCCTAACAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp TTGACCATACTGAATAAGGACATGGTGAGTTTGAACTTTGCCCTACTACAAAGAGGGCACAAGGAATTCTaGGGCCACTTCTTGGATGAA +
Preference number: 4 (lower is better)
Translates to: LTILNKDMVSLNFALLQRGHKEF*GHFLDE
Trigger: TTCATCCAAGAAGTGGCCCCAGAATTCCTTGTGCCC...TCTTTGTAGTAGGGCAAAGTTCAAACTCACCATGTCCTTATTCAGTATGGTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR CCA 90 bp TATACACCAGAAAGCAGCATTGGCCTCAAAGTACAATTAGTCCTTTTAGTTCAGGGGCACAAGGAATTCTaGGGCCACTTCTTGGATGAA +
Preference number: 4 (lower is better)
Translates to: YTPESSIGLKVQLVLLVQGHKEF*GHFLDE
Trigger: TTCATCCAAGAAGTGGCCCCAGAATTCCTTGTGCCC...CTGAACTAAAAGGACTAATTGTACTTTGAGGCCAATGCTGCTTTCTGGTGTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp GTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACCAGGCCTTGTTGATGTGGTCCCGTaGTCATTTGTTGCTATGCAG +
Preference number: 4 (lower is better)
Translates to: VMYQVLFHGFKKDLEPGLVDVVP*SFVAMQ
Trigger: CTGCATAGCAACAAATGACCACGGGACCACATCAAC...AAGGCCTGGTTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp GTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACCAGGCCTTTCAGGATGTAGGATGTaGGGGACTCATAGGTGTCAT +
Preference number: 4 (lower is better)
Translates to: VMYQVLFHGFKKDLEPGLSGCRM*GTHRCH
Trigger: ATGACACCTATGAGTCCCCCACATCCTACATCCTGA...AAGGCCTGGTTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp TTATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAGCCTTGAATGACTTCTaGGGCAGCAAACTCAGGGTT +
Preference number: 4 (lower is better)
Translates to: LFTVTFSLALVHTARLCEALNDF*GSKLRV
Trigger: AACCCTGAGTTTGCTGCCCCAGAAGTCATTCAAGGC...TTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp TCTGTTAGGGTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAAGGCCGCACATCATTCTaGTGCTTGCGACGTTCTATG +
Preference number: 4 (lower is better)
Translates to: SVRVMYQVLFHGFKKDLEGRTSF*CLRRSM
Trigger: CATAGAACGTCGCAAGCACCAGAATGATGTGCGGCC...TTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCACCCTAACAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp CTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTCATCATTCAGTCTTGCTTTaGTTCACACTGCACGTCTAT +
Preference number: 4 (lower is better)
Translates to: LSFQNNSELPVNLRGAFHHSVLL*FTLHVY
Trigger: ATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATG...ATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp TTGACCATACTGAATAAGGACATGGTGAGTTTGAACTTTGCCCTACTACAAAGATTGGATGGGATGAGGTaGAGGGCGAATGAGGAAGTT +
Preference number: 4 (lower is better)
Translates to: LTILNKDMVSLNFALLQRLDGMR*RANEEV
Trigger: AACTTCCTCATTCGCCCTCCACCTCATCCCATCCAA...TCTTTGTAGTAGGGCAAAGTTCAAACTCACCATGTCCTTATTCAGTATGGTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR CCA 90 bp CTGACGAGGTTTAAGAGGTACATCTCTCAATTCAGAGAACTGCACGGAGTGAAAGGACTTTATGGATATTaGGAATCCTCAGAGCCTACA +
Preference number: 4 (lower is better)
Translates to: LTRFKRYISQFRELHGVKGLYGY*ESSEPT
Trigger: TGTAGGCTCTGAGGATTCCCAATATCCATAAAGTCC...TTTCACTCCGTGCAGTTCTCTGAATTGAGAGATGTACCTCTTAAACCTCGTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR CCA 90 bp TTATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAATGCAACCCCACATCTaGATCCTCCCAACTCTGTTG +
Preference number: 4 (lower is better)
Translates to: LFTVTFSLALVHTARLCEMQPHI*ILPTLL
Trigger: CAACAGAGTTGGGAGGATCCAGATGTGGGGTTGCAT...TTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR CCA 90 bp ATGTGCGATGGTCCCTATGGGGAAACCTGTCCACTTATGAATAAGGCCCTTTGTAGGATCATCATCATCTaGGATTCCTTGTTATTTCCA +
Preference number: 4 (lower is better)
Translates to: MCDGPYGETCPLMNKALCRIIII*DSLLFP
Trigger: TGGAAATAACAAGGAATCCCAGATGATGATGATCCT...ACAAAGGGCCTTATTCATAAGTGGACAGGTTTCCCCATAGGGACCATCGCACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291478.9
3UTR CAA 72 bp GATTCCTTGTTATTTCCAACTTGCTGTGGAGAACTCTaGAACCAAGACTACTCTCTTATCTCTGTTGGGAGG +
Preference number: 4 (lower is better)
Translates to: DSLLFPTCCGEL*NQDYSLISVGR
Trigger: CCTCCCAACAGAGATAAGAGAGTAGTCTTGGTTCAAGAGTTCTCCACAGCAAGTTGGAAATAACAAGGAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR TCA 90 bp TCTGTTAGGGTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACTGCTTGATTTGTTGTaGGGCATAATGACCGGCCTC +
Preference number: 4 (lower is better)
Translates to: SVRVMYQVLFHGFKKDLELLDLL*GIMTGL
Trigger: GAGGCCGGTCATTATGCCTCACAACAAATCAAGCAG...TTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCACCCTAACAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp GTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACCAGGCCTTGGGTGGAGATCTGCTTaGTTTGTTGTGAGGCATAAT +
Preference number: 4 (lower is better)
Translates to: VMYQVLFHGFKKDLEPGLGWRSA*FVVRHN
Trigger: ATTATGCCTCACAACAAATCAAGCAGATCTCCACCC...AAGGCCTGGTTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp TATACACCAGAAAGCAGCATTGGCCTCAAAGTACAATTAGTCCTTTTAGTTCAGCTTATCTCCGTGGCATaGATGTGGCCTTTTTCCACA +
Preference number: 4 (lower is better)
Translates to: YTPESSIGLKVQLVLLVQLISVA*MWPFST
Trigger: TGTGGAAAAAGGCCACATTCATGCCACGGAGATAAG...CTGAACTAAAAGGACTAATTGTACTTTGAGGCCAATGCTGCTTTCTGGTGTATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp CATTTTAGACTTTGGAGAGAAGCTCAGCAACCTCGAATTGCACCCAGTAGAGAACTCCTTTCAGGTGAATaGTCCTTTCTTGAATCACTT +
Preference number: 4 (lower is better)
Translates to: HFRLWREAQQPRIAPSRELLSGE*SFLESL
Trigger: AAGTGATTCAAGAAAGGATCATTCACCTGAAAGGAG...TTCTCTACTGGGTGCAATTCGAGGTTGCTGAGCTTCTCTCCAAAGTCTAAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR TCA 90 bp TCTGTTAGGGTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAAGGTGTTTTGGGGAGCTaGAGTGGCTCCTTTAAAGCT +
Preference number: 4 (lower is better)
Translates to: SVRVMYQVLFHGFKKDLEGVLGS*SGSFKA
Trigger: AGCTTTAAAGGAGCCACTTCAGCTCCCCAAAACACC...TTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCACCCTAACAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp GTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACCAGGCCTTTTCTCGCTTGAGGAATaGGAGTATGCATCTCTACAC +
Preference number: 4 (lower is better)
Translates to: VMYQVLFHGFKKDLEPGLFSLEE*EYASLH
Trigger: GTGTAGAGATGCATACTCTCATTCCTCAAGCGAGAA...AAGGCCTGGTTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR TCA 90 bp GTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACCAGGCCTTCAATGCCCAGATCCTTaGCATAGTCTTTCTCTGTCT +
Preference number: 4 (lower is better)
Translates to: VMYQVLFHGFKKDLEPGLQCPDP*HSLSLS
Trigger: AGACAGAGAAAGACTATGTCAAGGATCTGGGCATTG...AAGGCCTGGTTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp TATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAACTTCTATTCTCTTCATaGAGCCCTCCACCACAATGC +
Preference number: 4 (lower is better)
Translates to: YLQSHSVLLWFTLHVYVKLLFSS*SPPPQC
Trigger: GCATTGTGGTGGAGGGCTTCATGAAGAGAATAGAAG...TTTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp GTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACCAGGCCTTCTCAGTGTCAGCCTCTaGTTTATCTCCTGTTTTACC +
Preference number: 4 (lower is better)
Translates to: VMYQVLFHGFKKDLEPGLLSVSL*FISCFT
Trigger: GGTAAAACAGGAGATAAATCAGAGGCTGACACTGAG...AAGGCCTGGTTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp AAGGAAGAAGGTCTACATTCCTCGAAACTCATCCAGCACAATTCATTGACCATAATCTCAGGAAGTCCTTaGGGAGCAACTGGTATTTTG +
Preference number: 4 (lower is better)
Translates to: KEEGLHSSKLIQHNSLTIISGSP*GATGIL
Trigger: CAAAATACCAGTTGCTCCTCAAGGACTTCCTGAGAT...TATGGTCAATGAATTGTGCTGGATGAGTTTCGAGGAATGTAGACCTTCTTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR TCA 90 bp GTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACCAGGCCTTATCTCAGGAAGTCCTTaGGGAGCAACTGGTATTTTG +
Preference number: 4 (lower is better)
Translates to: VMYQVLFHGFKKDLEPGLISGSP*GATGIL
Trigger: CAAAATACCAGTTGCTCCTCAAGGACTTCCTGAGAT...AAGGCCTGGTTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp GTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACCAGGCCTTAAGTCTCTCTGTTCATaGGTGCAAACTTGCAGGGAT +
Preference number: 4 (lower is better)
Translates to: VMYQVLFHGFKKDLEPGLKSLCS*VQTCRD
Trigger: ATCCCTGCAAGTTTGCACTCATGAACAGAGAGACTT...AAGGCCTGGTTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp TATACACCAGAAAGCAGCATTGGCCTCAAAGTACAATTAGTCCTTTTAGTTCAGTTTCTAAGACTTGATTaGTGTCCTGCACCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: YTPESSIGLKVQLVLLVQFLRLD*CPAPRP
Trigger: AGGCCTGGGTGCAGGACATCAATCAAGTCTTAGAAA...CTGAACTAAAAGGACTAATTGTACTTTGAGGCCAATGCTGCTTTCTGGTGTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp TTATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAACTCCTTTCTTTCCGTTaGTACTCAATGGGCGATTGC +
Preference number: 4 (lower is better)
Translates to: LFTVTFSLALVHTARLCELLSFR*YSMGDC
Trigger: GCAATCGCCCATTGAGTATCAACGGAAAGAAAGGAG...TTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp TTATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAGAACACCTTGCACTTTaGCTGTTGCAGACGTTGATG +
Preference number: 4 (lower is better)
Translates to: LFTVTFSLALVHTARLCEEHLAL*LLQTLM
Trigger: CATCAACGTCTGCAACAGTCAAAGTGCAAGGTGTTC...TTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp TATACACCAGAAAGCAGCATTGGCCTCAAAGTACAATTAGTCCTTTTAGTTCAGACTGCAGAGCCTCCATaGTGTCTCGGATATAGAAAG +
Preference number: 4 (lower is better)
Translates to: YTPESSIGLKVQLVLLVQTAEPP*CLGYRK
Trigger: CTTTCTATATCCGAGACATCATGGAGGCTCTGCAGT...CTGAACTAAAAGGACTAATTGTACTTTGAGGCCAATGCTGCTTTCTGGTGTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp CCCAGGATCATCATCATCTGGGATTCCTTGTTATTTCCAACTTGCTGTGGAGAAAGCTCATACTGTATTTaGATTTATTTCCTGGCAGGC +
Preference number: 4 (lower is better)
Translates to: PRIIIIWDSLLFPTCCGESSYCI*IYFLAG
Trigger: GCCTGCCAGGAAATAAATTCAAATACAGTATGAGCT...TTCTCCACAGCAAGTTGGAAATAACAAGGAATCCCAGATGATGATGATCCTGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR TCA 90 bp CTGACGAGGTTTAAGAGGTACATCTCTCAATTCAGAGAACTGCACGGAGTGAAAAGCTCATACTGTATTTaGATTTATTTCCTGGCAGGC +
Preference number: 4 (lower is better)
Translates to: LTRFKRYISQFRELHGVKSSYCI*IYFLAG
Trigger: GCCTGCCAGGAAATAAATTCAAATACAGTATGAGCT...TTTCACTCCGTGCAGTTCTCTGAATTGAGAGATGTACCTCTTAAACCTCGTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp GTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACCAGGCCTTAGCCAGCCAACTTTCTaGAAGATGGTATTCTACAGC +
Preference number: 4 (lower is better)
Translates to: VMYQVLFHGFKKDLEPGLSQPTF*KMVFYS
Trigger: GCTGTAGAATACCATCTTTCAGAAAGTTGGCTGGCT...AAGGCCTGGTTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp CTGACGAGGTTTAAGAGGTACATCTCTCAATTCAGAGAACTGCACGGAGTGAAAAGTTCACTCCCACTGTaGACTACCATCATAATGATA +
Preference number: 4 (lower is better)
Translates to: LTRFKRYISQFRELHGVKSSLPL*TTIIMI
Trigger: TATCATTATGATGGTAGTTCACAGTGGGAGTGAACT...TTTCACTCCGTGCAGTTCTCTGAATTGAGAGATGTACCTCTTAAACCTCGTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR TCA 90 bp ATTCAGGTCATCCACAGTGGACAGAACAGAACTTGCCAAGCTGGACTTTATGGACAAAACCCTATGCAATaGATAAAAGCCAAGCAAGAA +
Preference number: 4 (lower is better)
Translates to: IQVIHSGQNRTCQAGLYGQNPMQ*IKAKQE
Trigger: TTCTTGCTTGGCTTTTATTCATTGCATAGGGTTTTG...TCCATAAAGTCCAGCTTGGCAAGTTCTGTTCTGTCCACTGTGGATGACCTGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR TCA 90 bp TCAGGTCATCCACAGTGGACAGAACAGAACTTGCCAAGCTGGACTTTATGGATAATTCCTGTGAGGCTGTaGAAAATAAATTGTGGTATG +
Preference number: 4 (lower is better)
Translates to: SGHPQWTEQNLPSWTLWIIPVRL*KINCGM
Trigger: CATACCACAATTTATTTTTCACAGCCTCACAGGAAT...TATCCATAAAGTCCAGCTTGGCAAGTTCTGTTCTGTCCACTGTGGATGACCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR TCA 90 bp TCAGGTCATCCACAGTGGACAGAACAGAACTTGCCAAGCTGGACTTTATGGATAGCTAACCTCACTATCTaGAATAGCAGTTATCTAACT +
Preference number: 4 (lower is better)
Translates to: SGHPQWTEQNLPSWTLWIANLTI*NSSYLT
Trigger: AGTTAGATAACTGCTATTTCAGATAGTGAGGTTAGC...TATCCATAAAGTCCAGCTTGGCAAGTTCTGTTCTGTCCACTGTGGATGACCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR TCA 90 bp ACAGATAAAGAAACCGAAGCTCACACAAGACCACAAAGCAAGATTTTGCTGAGTAAAGCAAGATTTTGCTaGGTCAAGACTGGGACAGGA +
Preference number: 4 (lower is better)
Translates to: TDKETEAHTRPQSKILLSKARFC*VKTGTG
Trigger: TCCTGTCCCAGTCTTGACTCAGCAAAATCTTGCTTT...ACTCAGCAAAATCTTGCTTTGTGGTCTTGTGTGAGCTTCGGTTTCTTTATCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439170.2
CDS-3UTR GCA 90 bp TCTGTTAGGGTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAAATCCAGTCCAACACCTaGTGTACATCCTGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: SVRVMYQVLFHGFKKDLEIQSNT*CTSCWK
Trigger: CTTCCAGCAGGATGTACAGCAGGTGTTGGACTGGAT...TTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCACCCTAACAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp GATAAAGAAACCGAAGCTCACACAAGACCACAAAGCAAGATTTTGCTGAGTCAATGCATCCACAGAATCTaGACAGACATCCTCCAACAT +
Preference number: 4 (lower is better)
Translates to: DKETEAHTRPQSKILLSQCIHRI*TDILQH
Trigger: ATGTTGGAGGATGTCTGTGCAGATTCTGTGGATGCA...TTGACTCAGCAAAATCTTGCTTTGTGGTCTTGTGTGAGCTTCGGTTTCTTTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439170.2
CDS-3UTR GCA 90 bp CAGCAATTCTCAGTCATGCAAATGCCCGTGTTAAAGTTCTCCATTGGATTTAAAGATCAGTTCCTGGACTaGATCCACAGAATCTGCACA +
Preference number: 4 (lower is better)
Translates to: QQFSVMQMPVLKFSIGFKDQFLD*IHRICT
Trigger: TGTGCAGATTCTGTGGATGCAGTCCAGGAACTGATC...TTTAAATCCAATGGAGAACTTTAACACGGGCATTTGCATGACTGAGAATTGCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp TATACACCAGAAAGCAGCATTGGCCTCAAAGTACAATTAGTCCTTTTAGTTCAGGATCAGTTCCTGGACTaGATCCACAGAATCTGCACA +
Preference number: 4 (lower is better)
Translates to: YTPESSIGLKVQLVLLVQDQFLD*IHRICT
Trigger: TGTGCAGATTCTGTGGATGCAGTCCAGGAACTGATC...CTGAACTAAAAGGACTAATTGTACTTTGAGGCCAATGCTGCTTTCTGGTGTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp CTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTCATTTGAAGTCATTCATCTaGCGAAGCAAGTCTTCATTC +
Preference number: 4 (lower is better)
Translates to: LSFQNNSELPVNLRGAFHLKSFI*RSKSSF
Trigger: GAATGAAGACTTGCTTCGGCAGATGAATGACTTCAA...ATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp CTGACGAGGTTTAAGAGGTACATCTCTCAATTCAGAGAACTGCACGGAGTGAAATTGAGCTCCAATTCATaGTGCTTCTCATGGAGAAAT +
Preference number: 4 (lower is better)
Translates to: LTRFKRYISQFRELHGVKLSSNS*CFSWRN
Trigger: ATTTCTCCATGAGAAGCAGCATGAATTGGAGCTCAA...TTTCACTCCGTGCAGTTCTCTGAATTGAGAGATGTACCTCTTAAACCTCGTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp GCCAGTGTTTGGGAAAGGCTAAAGTTAACCCTCATCTTCTCTACCACACATCATTTGAGCTCCAATTCATaGTGCTTCTCATGGAGAAAT +
Preference number: 4 (lower is better)
Translates to: ASVWERLKLTLIFSTTHHLSSNS*CFSWRN
Trigger: ATTTCTCCATGAGAAGCAGCATGAATTGGAGCTCAA...ATGATGTGTGGTAGAGAAGATGAGGGTTAACTTTAGCCTTTCCCAAACACTGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp TATACACCAGAAAGCAGCATTGGCCTCAAAGTACAATTAGTCCTTTTAGTTCAGTCGAACACCACATATTaGTGGCATTGGTCTAACCGC +
Preference number: 4 (lower is better)
Translates to: YTPESSIGLKVQLVLLVQSNTTY*WHWSNR
Trigger: GCGGTTAGACCAATGCCAGCAATATGTGGTGTTCGA...CTGAACTAAAAGGACTAATTGTACTTTGAGGCCAATGCTGCTTTCTGGTGTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp AAGGAAGAAGGTCTACATTCCTCGAAACTCATCCAGCACAATTCATTGACCATATGCATTGACAAGGTCTaGAGCAGTAGGTACTTCAGT +
Preference number: 4 (lower is better)
Translates to: KEEGLHSSKLIQHNSLTICIDKV*SSRYFS
Trigger: ACTGAAGTACCTACTGCTGCAGACCTTGTCAATGCA...TATGGTCAATGAATTGTGCTGGATGAGTTTCGAGGAATGTAGACCTTCTTCCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR GCA 90 bp AAGGAAGAAGGTCTACATTCCTCGAAACTCATCCAGCACAATTCATTGACCATATGTGCCAATCTGTCTTaGTCCTGGATACACTTTTCC +
Preference number: 4 (lower is better)
Translates to: KEEGLHSSKLIQHNSLTICANLS*SWIHFS
Trigger: GGAAAAGTGTATCCAGGAGCAAGACAGATTGGCACA...TATGGTCAATGAATTGTGCTGGATGAGTTTCGAGGAATGTAGACCTTCTTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR GCA 90 bp TCTGTTAGGGTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACTGAAGATGACAATCTaGTCGAAGAGGAACACGCGC +
Preference number: 4 (lower is better)
Translates to: SVRVMYQVLFHGFKKDLELKMTI*SKRNTR
Trigger: GCGCGTGTTCCTCTTCGAGCAGATTGTCATCTTCAG...TTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCACCCTAACAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp GCTCCCTCATATTCTCACAAATCTAAATTGCCATGCTCTTCCACAGAGGCAAGAGGTCATTTGTTGCTATaGAGGTATAAATCCCACTGT +
Preference number: 4 (lower is better)
Translates to: APSYSHKSKLPCSSTEARGHLLL*RYKSHC
Trigger: ACAGTGGGATTTATACCTGCATAGCAACAAATGACC...TCTTGCCTCTGTGGAAGAGCATGGCAATTTAGATTTGTGAGAATATGAGGGAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR GCA 90 bp TATACACCAGAAAGCAGCATTGGCCTCAAAGTACAATTAGTCCTTTTAGTTCAGTACATGTCTCCTCTTTaGTCTCATCCAAGAAGGGGG +
Preference number: 4 (lower is better)
Translates to: YTPESSIGLKVQLVLLVQYMSPL*SHPRRG
Trigger: CCCCCTTCTTGGATGAGAGCAAAGAGGAGACATGTA...CTGAACTAAAAGGACTAATTGTACTTTGAGGCCAATGCTGCTTTCTGGTGTATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp TATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAATACATGTCTCCTCTTTaGTCTCATCCAAGAAGGGGG +
Preference number: 4 (lower is better)
Translates to: YLQSHSVLLWFTLHVYVKYMSPL*SHPRRG
Trigger: CCCCCTTCTTGGATGAGAGCAAAGAGGAGACATGTA...TTTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp TCAGGTATTGATGGAAACTCATATGATGGCCATCCCTGGGCCAACAAATTAGCTTCAAAAGGGCAACATTaGTTTCTCTTAATGCACAGG +
Preference number: 4 (lower is better)
Translates to: SGIDGNSYDGHPWANKLASKGQH*FLLMHR
Trigger: CCTGTGCATTAAGAGAAAGCAATGTTGCCCTTTTGA...AGCTAATTTGTTGGCCCAGGGATGGCCATCATATGAGTTTCCATCAATACCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR GCA 90 bp CTGACGAGGTTTAAGAGGTACATCTCTCAATTCAGAGAACTGCACGGAGTGAAATCAAAAGGGCAACATTaGTTTCTCTTAATGCACAGG +
Preference number: 4 (lower is better)
Translates to: LTRFKRYISQFRELHGVKSKGQH*FLLMHR
Trigger: CCTGTGCATTAAGAGAAAGCAATGTTGCCCTTTTGA...TTTCACTCCGTGCAGTTCTCTGAATTGAGAGATGTACCTCTTAAACCTCGTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp CCCAGGATCATCATCATCTGGGATTCCTTGTTATTTCCAACTTGCTGTGGAGAAAAGGAAGGTAGCAGTTaGTTTCAAGGGCATTTTACT +
Preference number: 4 (lower is better)
Translates to: PRIIIIWDSLLFPTCCGEKEGSS*FQGHFT
Trigger: AGTAAAATGCCCTTGAAAGCAACTGCTACCTTCCTT...TTCTCCACAGCAAGTTGGAAATAACAAGGAATCCCAGATGATGATGATCCTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR CCA 90 bp TACAAAGACAGTCCTTTCCTGAGCCAGGTGCAATTCCAGAGAATGACACTTTGCAATAACTCCTTGTTGTaGCTTATCCAGTCAAACATC +
Preference number: 4 (lower is better)
Translates to: YKDSPFLSQVQFQRMTLCNNSLL*LIQSNI
Trigger: GATGTTTGACTGGATAAGCCACAACAAGGAGTTATT...GCAAAGTGTCATTCTCTGGAATTGCACCTGGCTCAGGAAAGGACTGTCTTTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp ACAGATAAAGAAACCGAAGCTCACACAAGACCACAAAGCAAGATTTTGCTGAGTAGAAAGGCCTCACCATaGTTTTCAATCCAGTCCAAC +
Preference number: 4 (lower is better)
Translates to: TDKETEAHTRPQSKILLSRKASP*FSIQSN
Trigger: GTTGGACTGGATTGAAAACCATGGTGAGGCCTTTCT...ACTCAGCAAAATCTTGCTTTGTGGTCTTGTGTGAGCTTCGGTTTCTTTATCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439170.2
CDS-3UTR CCA 90 bp GATAAAGAAACCGAAGCTCACACAAGACCACAAAGCAAGATTTTGCTGAGTCAATCTTTGGTGTGTGTGTaGAAGGAAACAGACATGTCC +
Preference number: 4 (lower is better)
Translates to: DKETEAHTRPQSKILLSQSLVCV*KETDMS
Trigger: GGACATGTCTGTTTCCTTCCACACACACACCAAAGA...TTGACTCAGCAAAATCTTGCTTTGTGGTCTTGTGTGAGCTTCGGTTTCTTTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439170.2
CDS-3UTR CCA 90 bp ACAGATAAAGAAACCGAAGCTCACACAAGACCACAAAGCAAGATTTTGCTGAGTTGCTTGATCAGTTCCTaGACTGCATCCACAGAATCT +
Preference number: 4 (lower is better)
Translates to: TDKETEAHTRPQSKILLSCLISS*TASTES
Trigger: AGATTCTGTGGATGCAGTCCAGGAACTGATCAAGCA...ACTCAGCAAAATCTTGCTTTGTGGTCTTGTGTGAGCTTCGGTTTCTTTATCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439170.2
CDS-3UTR CCA 90 bp TTATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAAGATCCTGTCCCTGCTaGATAACCTCAAAGGTCATG +
Preference number: 4 (lower is better)
Translates to: LFTVTFSLALVHTARLCERSCPC*ITSKVM
Trigger: CATGACCTTTGAGGTTATCCAGCAGGGACAGGATCT...TTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp TCTGTTAGGGTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAATCAATTCCTGATGCCTaGACCTCCGTGATGTACTGG +
Preference number: 4 (lower is better)
Translates to: SVRVMYQVLFHGFKKDLESIPDA*TSVMYW
Trigger: CCAGTACATCACGGAGGTCCAGGCATCAGGAATTGA...TTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCACCCTAACAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp CAGCAATTCTCAGTCATGCAAATGCCCGTGTTAAAGTTCTCCATTGGATTTAAATCTTCTGCAAGGAAGTaGCATGAAAGAGGGACTCGA +
Preference number: 4 (lower is better)
Translates to: QQFSVMQMPVLKFSIGFKSSARK*HERGTR
Trigger: TCGAGTCCCTCTTTCATGCCACTTCCTTGCAGAAGA...TTTAAATCCAATGGAGAACTTTAACACGGGCATTTGCATGACTGAGAATTGCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240874.7
CDS-3UTR CCA 90 bp GTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACCAGGCCTTCTGACGTTGTTCCTGTaGATGTACTTGAGAAACACC +
Preference number: 4 (lower is better)
Translates to: VMYQVLFHGFKKDLEPGLLTLFL*MYLRNT
Trigger: GGTGTTTCTCAAGTACATCCACAGGAACAACGTCAG...AAGGCCTGGTTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp TTATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAACATATTGCTGGCATTaGTCTAACCGCCGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: LFTVTFSLALVHTARLCETYCWH*SNRRFF
Trigger: GAAGAAGCGGCGGTTAGACCAATGCCAGCAATATGT...TTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp TATACACCAGAAAGCAGCATTGGCCTCAAAGTACAATTAGTCCTTTTAGTTCAGACATATTGCTGGCATTaGTCTAACCGCCGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: YTPESSIGLKVQLVLLVQTYCWH*SNRRFF
Trigger: GAAGAAGCGGCGGTTAGACCAATGCCAGCAATATGT...CTGAACTAAAAGGACTAATTGTACTTTGAGGCCAATGCTGCTTTCTGGTGTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp TCTGTTAGGGTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAAAACACCACATATTGCTaGCATTGGTCTAACCGCCGC +
Preference number: 4 (lower is better)
Translates to: SVRVMYQVLFHGFKKDLENTTYC*HWSNRR
Trigger: GCGGCGGTTAGACCAATGCCAGCAATATGTGGTGTT...TTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCACCCTAACAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp GCCAGTGTTTGGGAAAGGCTAAAGTTAACCCTCATCTTCTCTACCACACATCATATTTCCTTATCTCCGTaGCATGAATGTGGCCTTTTT +
Preference number: 4 (lower is better)
Translates to: ASVWERLKLTLIFSTTHHISLSP*HECGLF
Trigger: AAAAAGGCCACATTCATGCCACGGAGATAAGGAAAT...ATGATGTGTGGTAGAGAAGATGAGGGTTAACTTTAGCCTTTCCCAAACACTGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp CATTTTAGACTTTGGAGAGAAGCTCAGCAACCTCGAATTGCACCCAGTAGAGAAATTTCCTTATCTCCGTaGCATGAATGTGGCCTTTTT +
Preference number: 4 (lower is better)
Translates to: HFRLWREAQQPRIAPSREISLSP*HECGLF
Trigger: AAAAAGGCCACATTCATGCCACGGAGATAAGGAAAT...TTCTCTACTGGGTGCAATTCGAGGTTGCTGAGCTTCTCTCCAAAGTCTAAAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp TATACACCAGAAAGCAGCATTGGCCTCAAAGTACAATTAGTCCTTTTAGTTCAGATCCGAAAGGCTTGCTaGGATAATATCCAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: YTPESSIGLKVQLVLLVQIRKAC*DNIQLQ
Trigger: CTGGAGCTGGATATTATCCCAGCAAGCCTTTCGGAT...CTGAACTAAAAGGACTAATTGTACTTTGAGGCCAATGCTGCTTTCTGGTGTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp GTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACCAGGCCTTTGCTCCAGGATAAGCTaGTTGGAATCAGGCTTGTTT +
Preference number: 4 (lower is better)
Translates to: VMYQVLFHGFKKDLEPGLCSRIS*LESGLF
Trigger: AAACAAGCCTGATTCCAACCAGCTTATCCTGGAGCA...AAGGCCTGGTTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp TATACACCAGAAAGCAGCATTGGCCTCAAAGTACAATTAGTCCTTTTAGTTCAGGTGGTATTCAAACCCTaGACTGCCATTGGAGGTAGA +
Preference number: 4 (lower is better)
Translates to: YTPESSIGLKVQLVLLVQVVFKP*TAIGGR
Trigger: TCTACCTCCAATGGCAGTCCAGGGTTTGAATACCAC...CTGAACTAAAAGGACTAATTGTACTTTGAGGCCAATGCTGCTTTCTGGTGTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp TATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAAGTGGTATTCAAACCCTaGACTGCCATTGGAGGTAGA +
Preference number: 4 (lower is better)
Translates to: YLQSHSVLLWFTLHVYVKVVFKP*TAIGGR
Trigger: TCTACCTCCAATGGCAGTCCAGGGTTTGAATACCAC...TTTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp TATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAATGGACCACCTCACCTTaGCTCACACAGATTTCATTC +
Preference number: 4 (lower is better)
Translates to: YLQSHSVLLWFTLHVYVKWTTSP*LTQISF
Trigger: GAATGAAATCTGTGTGAGCCAAGGTGAGGTGGTCCA...TTTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp CCCAGGATCATCATCATCTGGGATTCCTTGTTATTTCCAACTTGCTGTGGAGAATCTGGGGCCACTTCTTaGATGAAATTTGGATTTAAG +
Preference number: 4 (lower is better)
Translates to: PRIIIIWDSLLFPTCCGESGATS*MKFGFK
Trigger: CTTAAATCCAAATTTCATCCAAGAAGTGGCCCCAGA...TTCTCCACAGCAAGTTGGAAATAACAAGGAATCCCAGATGATGATGATCCTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR CCA 90 bp TATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAAAAGGATGTTCTGGTCTaGACCCTTCCAAGTGATGGT +
Preference number: 4 (lower is better)
Translates to: YLQSHSVLLWFTLHVYVKKDVLV*TLPSDG
Trigger: ACCATCACTTGGAAGGGTCCAGACCAGAACATCCTT...TTTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp TCTGTTAGGGTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAAGTGTCAAGGATGTTCTaGTCTGGACCCTTCCAAGTG +
Preference number: 4 (lower is better)
Translates to: SVRVMYQVLFHGFKKDLEVSRMF*SGPFQV
Trigger: CACTTGGAAGGGTCCAGACCAGAACATCCTTGACAC...TTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCACCCTAACAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp TATACACCAGAAAGCAGCATTGGCCTCAAAGTACAATTAGTCCTTTTAGTTCAGTTGCAGACGTTGATGTaGTCCCGTGGTCATTTGTTG +
Preference number: 4 (lower is better)
Translates to: YTPESSIGLKVQLVLLVQLQTLM*SRGHLL
Trigger: CAACAAATGACCACGGGACCACATCAACGTCTGCAA...CTGAACTAAAAGGACTAATTGTACTTTGAGGCCAATGCTGCTTTCTGGTGTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp GTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACCAGGCCTTAGCAGCATCATATTCTaGAAGTCGCACAAACTCCGA +
Preference number: 4 (lower is better)
Translates to: VMYQVLFHGFKKDLEPGLSSIIF*KSHKLR
Trigger: TCGGAGTTTGTGCGACTTCCAGAATATGATGCTGCT...AAGGCCTGGTTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp TTGACCATACTGAATAAGGACATGGTGAGTTTGAACTTTGCCCTACTACAAAGAAAACAGGAACAAGAGTaGCCCCTGATCCTTTTTCCC +
Preference number: 4 (lower is better)
Translates to: LTILNKDMVSLNFALLQRKQEQE*PLILFP
Trigger: GGGAAAAAGGATCAGGGGCCACTCTTGTTCCTGTTT...TCTTTGTAGTAGGGCAAAGTTCAAACTCACCATGTCCTTATTCAGTATGGTCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000291478.9
3UTR CAA 72 bp CTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTaGCGGGGAGCGTTTCATATACAGAAAGAACCTATC +
Preference number: 4 (lower is better)
Translates to: LSFQNNSELPVN*RGAFHIQKEPI
Trigger: GATAGGTTCTTTCTGTATATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
3UTR CAA 72 bp GATCATCATCATCTGGGATTCCTTGTTATTTCCAACTaGCTGTGGAGAACTCTTGAACCAAGACTACTCTCT +
Preference number: 4 (lower is better)
Translates to: DHHHLGFLVISN*LWRTLEPRLLS
Trigger: AGAGAGTAGTCTTGGTTCAAGAGTTCTCCACAGCAAGTTGGAAATAACAAGGAATCCCAGATGATGATGATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291478.9
3UTR CAA 72 bp GGTCTACATTCCTCGAAACTCATCCAGCACAATTCATaGACCATACTGAATAAGGACATGGTGAGTTTGAAC +
Preference number: 4 (lower is better)
Translates to: GLHSSKLIQHNS*TILNKDMVSLN
Trigger: GTTCAAACTCACCATGTCCTTATTCAGTATGGTCAATGAATTGTGCTGGATGAGTTTCGAGGAATGTAGACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR TCA 90 bp TTATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAATGCTCGTCTCAAAGATaGATTTGGAGCTGCCAAAGT +
Preference number: 4 (lower is better)
Translates to: LFTVTFSLALVHTARLCECSSQR*IWSCQS
Trigger: ACTTTGGCAGCTCCAAATTCATCTTTGAGACGAGCA...TTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp CAGCAATTCTCAGTCATGCAAATGCCCGTGTTAAAGTTCTCCATTGGATTTAAATCAGCACCTTTTTCTTaGGCTGTGTGTGTTCGTCAA +
Preference number: 4 (lower is better)
Translates to: QQFSVMQMPVLKFSIGFKSAPFS*AVCVRQ
Trigger: TTGACGAACACACACAGCTCAAGAAAAAGGTGCTGA...TTTAAATCCAATGGAGAACTTTAACACGGGCATTTGCATGACTGAGAATTGCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR TCA 90 bp TATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAAGGGTGGAGATCTGCTTaGTTTGTTGTGAGGCATAAT +
Preference number: 4 (lower is better)
Translates to: YLQSHSVLLWFTLHVYVKGWRSA*FVVRHN
Trigger: ATTATGCCTCACAACAAATCAAGCAGATCTCCACCC...TTTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp TATACACCAGAAAGCAGCATTGGCCTCAAAGTACAATTAGTCCTTTTAGTTCAGTTAGGTCCTCTGTGTTaGAGTCATTCATCTGCCGAA +
Preference number: 4 (lower is better)
Translates to: YTPESSIGLKVQLVLLVQLGPLC*SHSSAE
Trigger: TTCGGCAGATGAATGACTTCAACACAGAGGACCTAA...CTGAACTAAAAGGACTAATTGTACTTTGAGGCCAATGCTGCTTTCTGGTGTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp GTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACCAGGCCTTAGTGGAGGTATGTGTTaGGAGGTAAAATTCACCTGT +
Preference number: 4 (lower is better)
Translates to: VMYQVLFHGFKKDLEPGLSGGMC*EVKFTC
Trigger: ACAGGTGAATTTTACCTCTCAACACATACCTCCACT...AAGGCCTGGTTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp TTATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAATATTATCCTCTGTGTTaGCTCCTAGGGCTTTCTCCA +
Preference number: 4 (lower is better)
Translates to: LFTVTFSLALVHTARLCEYYPLC*LLGLSP
Trigger: TGGAGAAAGCCCTAGGAGTCAACACAGAGGATAATA...TTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp TATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAACTTCTCGAATGTTCTTaGTCCACTCCTGCTTGGTTT +
Preference number: 4 (lower is better)
Translates to: YLQSHSVLLWFTLHVYVKLLECS*STPAWF
Trigger: AAACCAAGCAGGAGTGGATCAAGAACATTCGAGAAG...TTTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp TATACACCAGAAAGCAGCATTGGCCTCAAAGTACAATTAGTCCTTTTAGTTCAGCAATGCCCAGATCCTTaGCATAGTCTTTCTCTGTCT +
Preference number: 4 (lower is better)
Translates to: YTPESSIGLKVQLVLLVQQCPDP*HSLSLS
Trigger: AGACAGAGAAAGACTATGTCAAGGATCTGGGCATTG...CTGAACTAAAAGGACTAATTGTACTTTGAGGCCAATGCTGCTTTCTGGTGTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp TTATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAACTCAGTGTCAGCCTCTaGTTTATCTCCTGTTTTACC +
Preference number: 4 (lower is better)
Translates to: LFTVTFSLALVHTARLCELSVSL*FISCFT
Trigger: GGTAAAACAGGAGATAAATCAGAGGCTGACACTGAG...TTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp GTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACCAGGCCTTTGCTTTCTCAATATCTaGACACTCCAAACCAGCCTT +
Preference number: 4 (lower is better)
Translates to: VMYQVLFHGFKKDLEPGLCFLNI*TLQTSL
Trigger: AAGGCTGGTTTGGAGTGTTCAGATATTGAGAAAGCA...AAGGCCTGGTTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp TATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAAAAGTCTCTCTGTTCATaGGTGCAAACTTGCAGGGAT +
Preference number: 4 (lower is better)
Translates to: YLQSHSVLLWFTLHVYVKKSLCS*VQTCRD
Trigger: ATCCCTGCAAGTTTGCACTCATGAACAGAGAGACTT...TTTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp TCTGTTAGGGTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAATTTCTAAGACTTGATTaGTGTCCTGCACCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: SVRVMYQVLFHGFKKDLEFLRLD*CPAPRP
Trigger: AGGCCTGGGTGCAGGACATCAATCAAGTCTTAGAAA...TTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCACCCTAACAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp TATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAAAAGATCATCACACTCTaGTTCCTCGGAACTGTTCGT +
Preference number: 4 (lower is better)
Translates to: YLQSHSVLLWFTLHVYVKKIITL*FLGTVR
Trigger: ACGAACAGTTCCGAGGAATCAGAGTGTGATGATCTT...TTTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp AAGGAAGAAGGTCTACATTCCTCGAAACTCATCCAGCACAATTCATTGACCATACAGCTCAGTGTAAGCTaGGTCAAAATTTTCCTTCCA +
Preference number: 4 (lower is better)
Translates to: KEEGLHSSKLIQHNSLTIQLSVS*VKIFLP
Trigger: TGGAAGGAAAATTTTGACTCAGCTTACACTGAGCTG...TATGGTCAATGAATTGTGCTGGATGAGTTTCGAGGAATGTAGACCTTCTTCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR TCA 90 bp CTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTCATTTGCGGGTAGCTTTGTaGATGCATTTCTTTACTATA +
Preference number: 4 (lower is better)
Translates to: LSFQNNSELPVNLRGAFHLRVAL*MHFFTI
Trigger: TATAGTAAAGAAATGCATTCACAAAGCTACCCGCAA...ATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp TATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAAGAATCCGTAGGTCAATaGGCAGGTTTTCAGGCTTTA +
Preference number: 4 (lower is better)
Translates to: YLQSHSVLLWFTLHVYVKESVGQ*AGFQAL
Trigger: TAAAGCCTGAAAACCTGCTCATTGACCTACGGATTC...TTTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp TTATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAGAATCCGTAGGTCAATaGGCAGGTTTTCAGGCTTTA +
Preference number: 4 (lower is better)
Translates to: LFTVTFSLALVHTARLCEESVGQ*AGFQAL
Trigger: TAAAGCCTGAAAACCTGCTCATTGACCTACGGATTC...TTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp ATCAATTGTTACAAGCCTGATGGAAGTATGTACTTATATGTATATGTGCGATGGCCACCCTGCATACGTTaGTACATGTCTCCTCTTTGC +
Preference number: 4 (lower is better)
Translates to: INCYKPDGSMYLYVYVRWPPCIR*YMSPLC
Trigger: GCAAAGAGGAGACATGTATCAACGTATGCAGGGTGG...CCATCGCACATATACATATAAGTACATACTTCCATCAGGCTTGTAACAATTGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR TCA 90 bp TTATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAATCCCATCCTCCCCTCTaGAAGGCACTACTATTTATA +
Preference number: 4 (lower is better)
Translates to: LFTVTFSLALVHTARLCESHPPL*KALLFI
Trigger: TATAAATAGTAGTGCCTTTCAGAGGGGAGGATGGGA...TTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR GCA 90 bp TATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAATGCATCCACAGAATCTaGACAGACATCCTCCAACAT +
Preference number: 4 (lower is better)
Translates to: YLQSHSVLLWFTLHVYVKCIHRI*TDILQH
Trigger: ATGTTGGAGGATGTCTGTGCAGATTCTGTGGATGCA...TTTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp TATACACCAGAAAGCAGCATTGGCCTCAAAGTACAATTAGTCCTTTTAGTTCAGTGTACTGCTCAAAGATaGGCAGTTGCAGGAAGATGT +
Preference number: 4 (lower is better)
Translates to: YTPESSIGLKVQLVLLVQCTAQR*AVAGRC
Trigger: ACATCTTCCTGCAACTGCGCATCTTTGAGCAGTACA...CTGAACTAAAAGGACTAATTGTACTTTGAGGCCAATGCTGCTTTCTGGTGTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp TTATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAAATTCCAATAACTCTTaGACCTGGGCTGCCAGATCA +
Preference number: 4 (lower is better)
Translates to: LFTVTFSLALVHTARLCENSNNS*TWAARS
Trigger: TGATCTGGCAGCCCAGGTGCAAGAGTTATTGGAATT...TTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp GTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACCAGGCCTTCTTATGAGTCTGCTCTaGATTGAGCTCCAATTCATG +
Preference number: 4 (lower is better)
Translates to: VMYQVLFHGFKKDLEPGLLMSLL*IELQFM
Trigger: CATGAATTGGAGCTCAATGCAGAGCAGACTCATAAG...AAGGCCTGGTTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp TCTGTTAGGGTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAATTTGATGTTTCCATCTaGCTTCCCGCTGTTAAGCCG +
Preference number: 4 (lower is better)
Translates to: SVRVMYQVLFHGFKKDLEFDVSI*LPAVKP
Trigger: CGGCTTAACAGCGGGAAGGCAGATGGAAACATCAAA...TTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCACCCTAACAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp TATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAATGCATTGACAAGGTCTaGAGCAGTAGGTACTTCAGT +
Preference number: 4 (lower is better)
Translates to: YLQSHSVLLWFTLHVYVKCIDKV*SSRYFS
Trigger: ACTGAAGTACCTACTGCTGCAGACCTTGTCAATGCA...TTTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp GTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACCAGGCCTTGACCAACTTTTCTATTaGATTGACAAGGTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: VMYQVLFHGFKKDLEPGLDQLFY*IDKVCS
Trigger: GCTGCAGACCTTGTCAATGCAATAGAAAAGTTGGTC...AAGGCCTGGTTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp TATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAATGTGCCAATCTGTCTTaGTCCTGGATACACTTTTCC +
Preference number: 4 (lower is better)
Translates to: YLQSHSVLLWFTLHVYVKCANLS*SWIHFS
Trigger: GGAAAAGTGTATCCAGGAGCAAGACAGATTGGCACA...TTTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp GTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACCAGGCCTTCTTAATAAAGAGCTGTaGCAATCTGTCTTGCTCCTG +
Preference number: 4 (lower is better)
Translates to: VMYQVLFHGFKKDLEPGLLNKEL*QSVLLL
Trigger: CAGGAGCAAGACAGATTGGCACAGCTCTTTATTAAG...AAGGCCTGGTTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp TATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAAGATTCATCATGTCATTaGAGCGTTTGGGAACAAGGC +
Preference number: 4 (lower is better)
Translates to: YLQSHSVLLWFTLHVYVKDSSCH*SVWEQG
Trigger: GCCTTGTTCCCAAACGCTGCAATGACATGATGAATC...TTTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp TATACACCAGAAAGCAGCATTGGCCTCAAAGTACAATTAGTCCTTTTAGTTCAGGATTCATCATGTCATTaGAGCGTTTGGGAACAAGGC +
Preference number: 4 (lower is better)
Translates to: YTPESSIGLKVQLVLLVQDSSCH*SVWEQG
Trigger: GCCTTGTTCCCAAACGCTGCAATGACATGATGAATC...CTGAACTAAAAGGACTAATTGTACTTTGAGGCCAATGCTGCTTTCTGGTGTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp GTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACCAGGCCTTCTCTCTGTTCATGAGTaGAAACTTGCAGGGATCATT +
Preference number: 4 (lower is better)
Translates to: VMYQVLFHGFKKDLEPGLLSVHE*KLAGII
Trigger: AATGATCCCTGCAAGTTTGCACTCATGAACAGAGAG...AAGGCCTGGTTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp TTATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAAATGGGCGATTGCAGTaGATTCAAAAAGTCTCGCTG +
Preference number: 4 (lower is better)
Translates to: LFTVTFSLALVHTARLCENGRLQ*IQKVSL
Trigger: CAGCGAGACTTTTTGAATGCACTGCAATCGCCCATT...TTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp TATACACCAGAAAGCAGCATTGGCCTCAAAGTACAATTAGTCCTTTTAGTTCAGACCTCATCACAGCTGTaGTCCTTTCTTTCCGTTGAT +
Preference number: 4 (lower is better)
Translates to: YTPESSIGLKVQLVLLVQTSSQL*SFLSVD
Trigger: ATCAACGGAAAGAAAGGAGCACAGCTGTGATGAGGT...CTGAACTAAAAGGACTAATTGTACTTTGAGGCCAATGCTGCTTTCTGGTGTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp GTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACCAGGCCTTAATCTCTGGCAGCATTaGTCACACCACAGAAGTATT +
Preference number: 4 (lower is better)
Translates to: VMYQVLFHGFKKDLEPGLNLWQH*SHHRSI
Trigger: AATACTTCTGTGGTGTGAGCAATGCTGCCAGAGATT...AAGGCCTGGTTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp TCTGTTAGGGTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAAAGAACTATCAGCGGCTaGATGGTGACAGGTATTGCA +
Preference number: 4 (lower is better)
Translates to: SVRVMYQVLFHGFKKDLERTISG*MVTGIA
Trigger: TGCAATACCTGTCACCATGCAGCCGCTGATAGTTCT...TTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCACCCTAACAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp CTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTCATTTTACTCTTCGCATCTaGCATAAGAAATACTGGAGA +
Preference number: 4 (lower is better)
Translates to: LSFQNNSELPVNLRGAFHFTLRI*HKKYWR
Trigger: TCTCCAGTATTTCTTATGGCAGATGCGAAGAGTAAA...ATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR GCA 90 bp AGCAGAAACTCAACTTGTTATAAAAACTCAGAATGGCTCAGCAGGGGGATCTTGACTTATATGTATATGTaGGATGGTCCCTATGGGGAA +
Preference number: 4 (lower is better)
Translates to: SRNSTCYKNSEWLSRGILTYMYM*DGPYGE
Trigger: TTCCCCATAGGGACCATCGCACATATACATATAAGT...CAAGATCCCCCTGCTGAGCCATTCTGAGTTTTTATAACAAGTTGAGTTTCTGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR CCA 90 bp CAGCAATTCTCAGTCATGCAAATGCCCGTGTTAAAGTTCTCCATTGGATTTAAATCTTTGGTGTGTGTGTaGAAGGAAACAGACATGTCC +
Preference number: 4 (lower is better)
Translates to: QQFSVMQMPVLKFSIGFKSLVCV*KETDMS
Trigger: GGACATGTCTGTTTCCTTCCACACACACACCAAAGA...TTTAAATCCAATGGAGAACTTTAACACGGGCATTTGCATGACTGAGAATTGCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp TATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAATGCTTGATCAGTTCCTaGACTGCATCCACAGAATCT +
Preference number: 4 (lower is better)
Translates to: YLQSHSVLLWFTLHVYVKCLISS*TASTES
Trigger: AGATTCTGTGGATGCAGTCCAGGAACTGATCAAGCA...TTTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp CAGCAATTCTCAGTCATGCAAATGCCCGTGTTAAAGTTCTCCATTGGATTTAAAAGGTCATGTTGTTCATaGCTAGCTTCCGTTCTGTGT +
Preference number: 4 (lower is better)
Translates to: QQFSVMQMPVLKFSIGFKRSCCS*LASVLC
Trigger: ACACAGAACGGAAGCTAGCCATGAACAACATGACCT...TTTAAATCCAATGGAGAACTTTAACACGGGCATTTGCATGACTGAGAATTGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp TATACACCAGAAAGCAGCATTGGCCTCAAAGTACAATTAGTCCTTTTAGTTCAGAGGTCATGTTGTTCATaGCTAGCTTCCGTTCTGTGT +
Preference number: 4 (lower is better)
Translates to: YTPESSIGLKVQLVLLVQRSCCS*LASVLC
Trigger: ACACAGAACGGAAGCTAGCCATGAACAACATGACCT...CTGAACTAAAAGGACTAATTGTACTTTGAGGCCAATGCTGCTTTCTGGTGTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp TATACACCAGAAAGCAGCATTGGCCTCAAAGTACAATTAGTCCTTTTAGTTCAGAATAACTCTTGCACCTaGGCTGCCAGATCAATGTCT +
Preference number: 4 (lower is better)
Translates to: YTPESSIGLKVQLVLLVQNNSCT*AARSMS
Trigger: AGACATTGATCTGGCAGCCCAGGTGCAAGAGTTATT...CTGAACTAAAAGGACTAATTGTACTTTGAGGCCAATGCTGCTTTCTGGTGTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp CTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTCATTCATGCTGCTTCTCATaGAGAAATTCCAATAACTCT +
Preference number: 4 (lower is better)
Translates to: LSFQNNSELPVNLRGAFHSCCFS*RNSNNS
Trigger: AGAGTTATTGGAATTTCTCCATGAGAAGCAGCATGA...ATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp TATACACCAGAAAGCAGCATTGGCCTCAAAGTACAATTAGTCCTTTTAGTTCAGCTGACGTTGTTCCTGTaGATGTACTTGAGAAACACC +
Preference number: 4 (lower is better)
Translates to: YTPESSIGLKVQLVLLVQLTLFL*MYLRNT
Trigger: GGTGTTTCTCAAGTACATCCACAGGAACAACGTCAG...CTGAACTAAAAGGACTAATTGTACTTTGAGGCCAATGCTGCTTTCTGGTGTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp TCTGTTAGGGTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAAATCCGAAAGGCTTGCTaGGATAATATCCAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: SVRVMYQVLFHGFKKDLEIRKAC*DNIQLQ
Trigger: CTGGAGCTGGATATTATCCCAGCAAGCCTTTCGGAT...TTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCACCCTAACAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp TACAAAGACAGTCCTTTCCTGAGCCAGGTGCAATTCCAGAGAATGACACTTTGCAGTGTATATATGAAATaGAATCATCATCTCTGCCTC +
Preference number: 4 (lower is better)
Translates to: YKDSPFLSQVQFQRMTLCSVYMK*NHHLCL
Trigger: GAGGCAGAGATGATGATTCCATTTCATATATACACT...GCAAAGTGTCATTCTCTGGAATTGCACCTGGCTCAGGAAAGGACTGTCTTTGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp TATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAATCCGTTGATACTCAATaGGCGATTGCAGTGCATTCA +
Preference number: 4 (lower is better)
Translates to: YLQSHSVLLWFTLHVYVKSVDTQ*AIAVHS
Trigger: TGAATGCACTGCAATCGCCCATTGAGTATCAACGGA...TTTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp TTATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAATCCGTTGATACTCAATaGGCGATTGCAGTGCATTCA +
Preference number: 4 (lower is better)
Translates to: LFTVTFSLALVHTARLCESVDTQ*AIAVHS
Trigger: TGAATGCACTGCAATCGCCCATTGAGTATCAACGGA...TTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp TCTGTTAGGGTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAATGGACCACCTCACCTTaGCTCACACAGATTTCATTC +
Preference number: 4 (lower is better)
Translates to: SVRVMYQVLFHGFKKDLEWTTSP*LTQISF
Trigger: GAATGAAATCTGTGTGAGCCAAGGTGAGGTGGTCCA...TTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCACCCTAACAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp TCTGTTAGGGTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAAAAGGATGTTCTGGTCTaGACCCTTCCAAGTGATGGT +
Preference number: 4 (lower is better)
Translates to: SVRVMYQVLFHGFKKDLEKDVLV*TLPSDG
Trigger: ACCATCACTTGGAAGGGTCCAGACCAGAACATCCTT...TTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCACCCTAACAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp TCTGTTAGGGTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAATTGCAGACGTTGATGTaGTCCCGTGGTCATTTGTTG +
Preference number: 4 (lower is better)
Translates to: SVRVMYQVLFHGFKKDLELQTLM*SRGHLL
Trigger: CAACAAATGACCACGGGACCACATCAACGTCTGCAA...TTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCACCCTAACAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp TATACACCAGAAAGCAGCATTGGCCTCAAAGTACAATTAGTCCTTTTAGTTCAGAGCAGCATCATATTCTaGAAGTCGCACAAACTCCGA +
Preference number: 4 (lower is better)
Translates to: YTPESSIGLKVQLVLLVQSSIIF*KSHKLR
Trigger: TCGGAGTTTGTGCGACTTCCAGAATATGATGCTGCT...CTGAACTAAAAGGACTAATTGTACTTTGAGGCCAATGCTGCTTTCTGGTGTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp CTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTCATTTTAAAAGGCCTATATaGCTGCCTCCTTTTAGTAAG +
Preference number: 4 (lower is better)
Translates to: LSFQNNSELPVNLRGAFHFKRPI*LPPFSK
Trigger: CTTACTAAAAGGAGGCAGCCATATAGGCCTTTTAAA...ATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp AAGGAAGAAGGTCTACATTCCTCGAAACTCATCCAGCACAATTCATTGACCATATATAAAAACTCAGAATaGCTCAGCAGGGGGATCTTG +
Preference number: 4 (lower is better)
Translates to: KEEGLHSSKLIQHNSLTIYKNSE*LSRGIL
Trigger: CAAGATCCCCCTGCTGAGCCATTCTGAGTTTTTATA...TATGGTCAATGAATTGTGCTGGATGAGTTTCGAGGAATGTAGACCTTCTTCCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR CCA 90 bp TATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAACCAAATATGTGTACTTaGGGGAATTCCATGCAACCC +
Preference number: 4 (lower is better)
Translates to: YLQSHSVLLWFTLHVYVKPNMCT*GNSMQP
Trigger: GGGTTGCATGGAATTCCCCCAAGTACACATATTTGG...TTTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR CCA 90 bp AGCAGAAACTCAACTTGTTATAAAAACTCAGAATGGCTCAGCAGGGGGATCTTGATTTCCAACTTGCTGTaGAGAACTCTTGAACCAAGA +
Preference number: 4 (lower is better)
Translates to: SRNSTCYKNSEWLSRGILISNLL*RTLEPR
Trigger: TCTTGGTTCAAGAGTTCTCCACAGCAAGTTGGAAAT...CAAGATCCCCCTGCTGAGCCATTCTGAGTTTTTATAACAAGTTGAGTTTCTGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR TCA 90 bp TCTGTTAGGGTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAATGCTCGTCTCAAAGATaGATTTGGAGCTGCCAAAGT +
Preference number: 4 (lower is better)
Translates to: SVRVMYQVLFHGFKKDLECSSQR*IWSCQS
Trigger: ACTTTGGCAGCTCCAAATTCATCTTTGAGACGAGCA...TTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCACCCTAACAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp TATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAAAGTGGAGGTATGTGTTaGGAGGTAAAATTCACCTGT +
Preference number: 4 (lower is better)
Translates to: YLQSHSVLLWFTLHVYVKSGGMC*EVKFTC
Trigger: ACAGGTGAATTTTACCTCTCAACACATACCTCCACT...TTTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp TATACACCAGAAAGCAGCATTGGCCTCAAAGTACAATTAGTCCTTTTAGTTCAGACTTCTCCAGCTCTTTaGGGAAGATGTTGTTATGGA +
Preference number: 4 (lower is better)
Translates to: YTPESSIGLKVQLVLLVQTSPAL*GRCCYG
Trigger: TCCATAACAACATCTTCCTCAAAGAGCTGGAGAAGT...CTGAACTAAAAGGACTAATTGTACTTTGAGGCCAATGCTGCTTTCTGGTGTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp TATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAACTTTCTTCTGCTTTTTaGTGTTTCCATCTGCCTTCC +
Preference number: 4 (lower is better)
Translates to: YLQSHSVLLWFTLHVYVKLSSAF*CFHLPS
Trigger: GGAAGGCAGATGGAAACATCAAAAAGCAGAAGAAAG...TTTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp TTATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAATGAACATGACTTCTTaGTGCTCCCGTCACTACTTT +
Preference number: 4 (lower is better)
Translates to: LFTVTFSLALVHTARLCEMNMTS*CSRHYF
Trigger: AAAGTAGTGACGGGAGCATCAAGAAGTCATGTTCAT...TTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp TCTGTTAGGGTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAAAAGATCATCACACTCTaGTTCCTCGGAACTGTTCGT +
Preference number: 4 (lower is better)
Translates to: SVRVMYQVLFHGFKKDLEKIITL*FLGTVR
Trigger: ACGAACAGTTCCGAGGAATCAGAGTGTGATGATCTT...TTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCACCCTAACAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp TTGACCATACTGAATAAGGACATGGTGAGTTTGAACTTTGCCCTACTACAAAGATACAGATCTTCAGGGTaGTTTCTCCAGAATCACAAG +
Preference number: 4 (lower is better)
Translates to: LTILNKDMVSLNFALLQRYRSSG*FLQNHK
Trigger: CTTGTGATTCTGGAGAAATCACCCTGAAGATCTGTA...TCTTTGTAGTAGGGCAAAGTTCAAACTCACCATGTCCTTATTCAGTATGGTCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR TCA 90 bp TATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAATACAGATCTTCAGGGTaGTTTCTCCAGAATCACAAG +
Preference number: 4 (lower is better)
Translates to: YLQSHSVLLWFTLHVYVKYRSSG*FLQNHK
Trigger: CTTGTGATTCTGGAGAAATCACCCTGAAGATCTGTA...TTTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp TTATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAACAGCTCAGTGTAAGCTaGGTCAAAATTTTCCTTCCA +
Preference number: 4 (lower is better)
Translates to: LFTVTFSLALVHTARLCEQLSVS*VKIFLP
Trigger: TGGAAGGAAAATTTTGACTCAGCTTACACTGAGCTG...TTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp ATCAATTGTTACAAGCCTGATGGAAGTATGTACTTATATGTATATGTGCGATGGACTGCAGAGCCTCCATaGTGTCTCGGATATAGAAAG +
Preference number: 4 (lower is better)
Translates to: INCYKPDGSMYLYVYVRWTAEPP*CLGYRK
Trigger: CTTTCTATATCCGAGACATCATGGAGGCTCTGCAGT...CCATCGCACATATACATATAAGTACATACTTCCATCAGGCTTGTAACAATTGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR TCA 90 bp TCTGTTAGGGTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAAACCCTGAATAACCACTaGCGAGGTTTAAGAGGTACA +
Preference number: 4 (lower is better)
Translates to: SVRVMYQVLFHGFKKDLETLNNH*RGLRGT
Trigger: TGTACCTCTTAAACCTCGTCAGTGGTTATTCAGGGT...TTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCACCCTAACAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp TTATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAAATGCTCTGTTAGGGTaGTGTATCAGGTTTTGTTCC +
Preference number: 4 (lower is better)
Translates to: LFTVTFSLALVHTARLCENALLG*CIRFCS
Trigger: GGAACAAAACCTGATACATCACCCTAACAGAGCATT...TTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp TATACACCAGAAAGCAGCATTGGCCTCAAAGTACAATTAGTCCTTTTAGTTCAGAATGCTCTGTTAGGGTaGTGTATCAGGTTTTGTTCC +
Preference number: 4 (lower is better)
Translates to: YTPESSIGLKVQLVLLVQNALLG*CIRFCS
Trigger: GGAACAAAACCTGATACATCACCCTAACAGAGCATT...CTGAACTAAAAGGACTAATTGTACTTTGAGGCCAATGCTGCTTTCTGGTGTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp TTGACCATACTGAATAAGGACATGGTGAGTTTGAACTTTGCCCTACTACAAAGACTCTGTTGTAAAAGCTaGTATGAAAGCTTGGGGTCT +
Preference number: 4 (lower is better)
Translates to: LTILNKDMVSLNFALLQRLCCKS*YESLGS
Trigger: AGACCCCAAGCTTTCATATCAGCTTTTACAACAGAG...TCTTTGTAGTAGGGCAAAGTTCAAACTCACCATGTCCTTATTCAGTATGGTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR TCA 90 bp AGCAGAAACTCAACTTGTTATAAAAACTCAGAATGGCTCAGCAGGGGGATCTTGATCACTACTGTTCTCTaGACAGGATCTCATTATGAA +
Preference number: 4 (lower is better)
Translates to: SRNSTCYKNSEWLSRGILITTVL*TGSHYE
Trigger: TTCATAATGAGATCCTGTTCAGAGAACAGTAGTGAT...CAAGATCCCCCTGCTGAGCCATTCTGAGTTTTTATAACAAGTTGAGTTTCTGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR TCA 90 bp TCTGTTAGGGTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAATTCTCGCTTGAGGAATaGGAGTATGCATCTTTCACC +
Preference number: 4 (lower is better)
Translates to: SVRVMYQVLFHGFKKDLEFSLEE*EYASFT
Trigger: GGTGAAAGATGCATACTCTCATTCCTCAAGCGAGAA...TTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCACCCTAACAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp TATACACCAGAAAGCAGCATTGGCCTCAAAGTACAATTAGTCCTTTTAGTTCAGAGCTCCAATTCATGCTaGTTCTCATGGAGAAATTCC +
Preference number: 4 (lower is better)
Translates to: YTPESSIGLKVQLVLLVQSSNSC*FSWRNS
Trigger: GGAATTTCTCCATGAGAAGCAGCATGAATTGGAGCT...CTGAACTAAAAGGACTAATTGTACTTTGAGGCCAATGCTGCTTTCTGGTGTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp GTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACCAGGCCTTTTGAGCTCCAATTCATaGTGCTTCTCATGGAGAAAT +
Preference number: 4 (lower is better)
Translates to: VMYQVLFHGFKKDLEPGLLSSNS*CFSWRN
Trigger: ATTTCTCCATGAGAAGCAGCATGAATTGGAGCTCAA...AAGGCCTGGTTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp TTATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAATTCTTGATCCACTCCTaGTTGGTTTCAATGTTGGAG +
Preference number: 4 (lower is better)
Translates to: LFTVTFSLALVHTARLCEFLIHS*LVSMLE
Trigger: CTCCAACATTGAAACCAAGCAGGAGTGGATCAAGAA...TTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp CAGCAATTCTCAGTCATGCAAATGCCCGTGTTAAAGTTCTCCATTGGATTTAAACAGAGAATGACACTTTaGATTGAGAGCACGATTCCT +
Preference number: 4 (lower is better)
Translates to: QQFSVMQMPVLKFSIGFKQRMTL*IESTIP
Trigger: AGGAATCGTGCTCTCAATGCAAAGTGTCATTCTCTG...TTTAAATCCAATGGAGAACTTTAACACGGGCATTTGCATGACTGAGAATTGCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR GCA 90 bp TTGACCATACTGAATAAGGACATGGTGAGTTTGAACTTTGCCCTACTACAAAGACTTAATAAAGAGCTGTaGCAATCTGTCTTGCTCCTG +
Preference number: 4 (lower is better)
Translates to: LTILNKDMVSLNFALLQRLNKEL*QSVLLL
Trigger: CAGGAGCAAGACAGATTGGCACAGCTCTTTATTAAG...TCTTTGTAGTAGGGCAAAGTTCAAACTCACCATGTCCTTATTCAGTATGGTCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR GCA 90 bp TATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAACTTAATAAAGAGCTGTaGCAATCTGTCTTGCTCCTG +
Preference number: 4 (lower is better)
Translates to: YLQSHSVLLWFTLHVYVKLNKEL*QSVLLL
Trigger: CAGGAGCAAGACAGATTGGCACAGCTCTTTATTAAG...TTTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp TCTGTTAGGGTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAAAATGGGCGATTGCAGTaGATTCAAAAAGTCTCGCTG +
Preference number: 4 (lower is better)
Translates to: SVRVMYQVLFHGFKKDLENGRLQ*IQKVSL
Trigger: CAGCGAGACTTTTTGAATGCACTGCAATCGCCCATT...TTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCACCCTAACAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp CTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTCATTTCATTCTCCTTCAGTaGATAGTAATCTTTGATCAC +
Preference number: 4 (lower is better)
Translates to: LSFQNNSELPVNLRGAFHFILLQ*IVIFDH
Trigger: GTGATCAAAGATTACTATGCACTGAAGGAGAATGAA...ATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp TTATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAACTCATGCGTAGAGTATaGCATGAACATGACTTCTTG +
Preference number: 4 (lower is better)
Translates to: LFTVTFSLALVHTARLCELMRRV*HEHDFL
Trigger: CAAGAAGTCATGTTCATGGCATACTCTACGCATGAG...TTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp TATACACCAGAAAGCAGCATTGGCCTCAAAGTACAATTAGTCCTTTTAGTTCAGCTCATGCGTAGAGTATaGCATGAACATGACTTCTTG +
Preference number: 4 (lower is better)
Translates to: YTPESSIGLKVQLVLLVQLMRRV*HEHDFL
Trigger: CAAGAAGTCATGTTCATGGCATACTCTACGCATGAG...CTGAACTAAAAGGACTAATTGTACTTTGAGGCCAATGCTGCTTTCTGGTGTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp GTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACCAGGCCTTGGTCATTTGTTGCTATaGAGGTATAAATCCCACTGT +
Preference number: 4 (lower is better)
Translates to: VMYQVLFHGFKKDLEPGLGHLLL*RYKSHC
Trigger: ACAGTGGGATTTATACCTGCATAGCAACAAATGACC...AAGGCCTGGTTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp TATACACCAGAAAGCAGCATTGGCCTCAAAGTACAATTAGTCCTTTTAGTTCAGCTTTATGTCCAAATGTaGAACCCTGCAGTTGTGAAG +
Preference number: 4 (lower is better)
Translates to: YTPESSIGLKVQLVLLVQLYVQM*NPAVVK
Trigger: CTTCACAACTGCAGGGTTGCACATTTGGACATAAAG...CTGAACTAAAAGGACTAATTGTACTTTGAGGCCAATGCTGCTTTCTGGTGTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp TTATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAACTTTATGTCCAAATGTaGAACCCTGCAGTTGTGAAG +
Preference number: 4 (lower is better)
Translates to: LFTVTFSLALVHTARLCELYVQM*NPAVVK
Trigger: CTTCACAACTGCAGGGTTGCACATTTGGACATAAAG...TTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp AGCAGAAACTCAACTTGTTATAAAAACTCAGAATGGCTCAGCAGGGGGATCTTGACTTCTGTGACCCTTTaGCTCTTTATTTCTTCAGAA +
Preference number: 4 (lower is better)
Translates to: SRNSTCYKNSEWLSRGILTSVTL*LFISSE
Trigger: TTCTGAAGAAATAAAGAGGCAAAGGGTCACAGAAGT...CAAGATCCCCCTGCTGAGCCATTCTGAGTTTTTATAACAAGTTGAGTTTCTGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR GCA 90 bp GCTCCCTCATATTCTCACAAATCTAAATTGCCATGCTCTTCCACAGAGGCAAGAAAATGCAATAGCCTGTaGGTATTAATTTCAGGCTTA +
Preference number: 4 (lower is better)
Translates to: APSYSHKSKLPCSSTEARKCNSL*VLISGL
Trigger: TAAGCCTGAAATTAATACGCACAGGCTATTGCATTT...TCTTGCCTCTGTGGAAGAGCATGGCAATTTAGATTTGTGAGAATATGAGGGAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR CCA 90 bp GCCAGTGTTTGGGAAAGGCTAAAGTTAACCCTCATCTTCTCTACCACACATCATAGTGTATATATGAAATaGAATCATCATCTCTGCCTC +
Preference number: 4 (lower is better)
Translates to: ASVWERLKLTLIFSTTHHSVYMK*NHHLCL
Trigger: GAGGCAGAGATGATGATTCCATTTCATATATACACT...ATGATGTGTGGTAGAGAAGATGAGGGTTAACTTTAGCCTTTCCCAAACACTGGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CCA 90 bp TATACACCAGAAAGCAGCATTGGCCTCAAAGTACAATTAGTCCTTTTAGTTCAGTTTCTGTTCTTCTTCTaGGTTTTTAGGAGGTGTGGG +
Preference number: 4 (lower is better)
Translates to: YTPESSIGLKVQLVLLVQFLFFF*VFRRCG
Trigger: CCCACACCTCCTAAAAACCCAGAAGAAGAACAGAAA...CTGAACTAAAAGGACTAATTGTACTTTGAGGCCAATGCTGCTTTCTGGTGTATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp TATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAAAATCTGTCTTGCTCCTaGATACACTTTTCCAGTTCC +
Preference number: 4 (lower is better)
Translates to: YLQSHSVLLWFTLHVYVKNLSCS*IHFSSS
Trigger: GGAACTGGAAAAGTGTATCCAGGAGCAAGACAGATT...TTTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp TTATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAATGTCATTGCAGCGTTTaGGAACAAGGCACATTAACT +
Preference number: 4 (lower is better)
Translates to: LFTVTFSLALVHTARLCECHCSV*EQGTLT
Trigger: AGTTAATGTGCCTTGTTCCCAAACGCTGCAATGACA...TTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp GTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACCAGGCCTTTCTGGGGCCACTTCTTaGATGAAATTTGGATTTAAG +
Preference number: 4 (lower is better)
Translates to: VMYQVLFHGFKKDLEPGLSGATS*MKFGFK
Trigger: CTTAAATCCAAATTTCATCCAAGAAGTGGCCCCAGA...AAGGCCTGGTTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp TCTGTTAGGGTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAAAGCAGCATCATATTCTaGAAGTCGCACAAACTCCGA +
Preference number: 4 (lower is better)
Translates to: SVRVMYQVLFHGFKKDLESSIIF*KSHKLR
Trigger: TCGGAGTTTGTGCGACTTCCAGAATATGATGCTGCT...TTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCACCCTAACAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp TTATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAACATTCAGTCTTGCTTTaGTTCACACTGCACGTCTAT +
Preference number: 4 (lower is better)
Translates to: LFTVTFSLALVHTARLCEHSVLL*FTLHVY
Trigger: ATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATG...TTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp CTGACGAGGTTTAAGAGGTACATCTCTCAATTCAGAGAACTGCACGGAGTGAAACAACTTTCTGAAAGATaGTATTCTACAGCTGTAGAA +
Preference number: 4 (lower is better)
Translates to: LTRFKRYISQFRELHGVKQLSER*YSTAVE
Trigger: TTCTACAGCTGTAGAATACCATCTTTCAGAAAGTTG...TTTCACTCCGTGCAGTTCTCTGAATTGAGAGATGTACCTCTTAAACCTCGTCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp GTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACCAGGCCTTACCAGAAAGCAGCATTaGCCTCAAAGTACAATTAGT +
Preference number: 4 (lower is better)
Translates to: VMYQVLFHGFKKDLEPGLTRKQH*PQSTIS
Trigger: ACTAATTGTACTTTGAGGCCAATGCTGCTTTCTGGT...AAGGCCTGGTTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp TATACACCAGAAAGCAGCATTGGCCTCAAAGTACAATTAGTCCTTTTAGTTCAGCCAAGCTGGACTTTATaGATATTGGGAATCCTCAGA +
Preference number: 4 (lower is better)
Translates to: YTPESSIGLKVQLVLLVQPSWTL*ILGILR
Trigger: TCTGAGGATTCCCAATATCCATAAAGTCCAGCTTGG...CTGAACTAAAAGGACTAATTGTACTTTGAGGCCAATGCTGCTTTCTGGTGTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR CCA 90 bp TATACACCAGAAAGCAGCATTGGCCTCAAAGTACAATTAGTCCTTTTAGTTCAGAAACTCAAACATTCCTaGTCCCACCCCTATATTCAG +
Preference number: 4 (lower is better)
Translates to: YTPESSIGLKVQLVLLVQKLKHS*SHPYIQ
Trigger: CTGAATATAGGGGTGGGACCAGGAATGTTTGAGTTT...CTGAACTAAAAGGACTAATTGTACTTTGAGGCCAATGCTGCTTTCTGGTGTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR CCA 90 bp TATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAAACCAATGGGGACATTTaGGGAAGGAAAAACAAAGAC +
Preference number: 4 (lower is better)
Translates to: YLQSHSVLLWFTLHVYVKTNGDI*GRKNKD
Trigger: GTCTTTGTTTTTCCTTCCCCAAATGTCCCCATTGGT...TTTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR CCA 90 bp AAGGAAGAAGGTCTACATTCCTCGAAACTCATCCAGCACAATTCATTGACCATACTAAGCCTCAGGAGTTaGCATTCCAAGAATTGTTAT +
Preference number: 4 (lower is better)
Translates to: KEEGLHSSKLIQHNSLTILSLRS*HSKNCY
Trigger: ATAACAATTCTTGGAATGCCAACTCCTGAGGCTTAG...TATGGTCAATGAATTGTGCTGGATGAGTTTCGAGGAATGTAGACCTTCTTCCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291478.9
3UTR CAA 72 bp CTAAGCCTCAGGAGTTGGCATTCCAAGAATTGTTATTaGCATTTCTTCTACCATGCTTCCTTTTCTCAGCTA +
Preference number: 4 (lower is better)
Translates to: LSLRSWHSKNCY*HFFYHASFSQL
Trigger: TAGCTGAGAAAAGGAAGCATGGTAGAAGAAATGCAAATAACAATTCTTGGAATGCCAACTCCTGAGGCTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR TCA 90 bp TTATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAACTCCTTTCAGGTGAATaGTCCTTTCTTGAATCACTT +
Preference number: 4 (lower is better)
Translates to: LFTVTFSLALVHTARLCELLSGE*SFLESL
Trigger: AAGTGATTCAAGAAAGGATCATTCACCTGAAAGGAG...TTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp CAGCAATTCTCAGTCATGCAAATGCCCGTGTTAAAGTTCTCCATTGGATTTAAACTCCTTTCAGGTGAATaGTCCTTTCTTGAATCACTT +
Preference number: 4 (lower is better)
Translates to: QQFSVMQMPVLKFSIGFKLLSGE*SFLESL
Trigger: AAGTGATTCAAGAAAGGATCATTCACCTGAAAGGAG...TTTAAATCCAATGGAGAACTTTAACACGGGCATTTGCATGACTGAGAATTGCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR TCA 90 bp TCTGTTAGGGTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACTTTCTTCTGCTTTTTaGTGTTTCCATCTGCCTTCC +
Preference number: 4 (lower is better)
Translates to: SVRVMYQVLFHGFKKDLELSSAF*CFHLPS
Trigger: GGAAGGCAGATGGAAACATCAAAAAGCAGAAGAAAG...TTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCACCCTAACAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp TCTGTTAGGGTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAATGCTTTCTCAATATCTaGACACTCCAAACCAGCCTT +
Preference number: 4 (lower is better)
Translates to: SVRVMYQVLFHGFKKDLECFLNI*TLQTSL
Trigger: AAGGCTGGTTTGGAGTGTTCAGATATTGAGAAAGCA...TTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCACCCTAACAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp TCTGTTAGGGTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACAGCTCAGTGTAAGCTaGGTCAAAATTTTCCTTCCA +
Preference number: 4 (lower is better)
Translates to: SVRVMYQVLFHGFKKDLEQLSVS*VKIFLP
Trigger: TGGAAGGAAAATTTTGACTCAGCTTACACTGAGCTG...TTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCACCCTAACAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp TTATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAGAGAACTGCACGGAGTaGAATGATGAACAGAATTAT +
Preference number: 4 (lower is better)
Translates to: LFTVTFSLALVHTARLCEENCTE*NDEQNY
Trigger: ATAATTCTGTTCATCATTTCACTCCGTGCAGTTCTC...TTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp TATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAAAGCTCATACTGTATTTaGATTTATTTCCTGGCAGGC +
Preference number: 4 (lower is better)
Translates to: YLQSHSVLLWFTLHVYVKSSYCI*IYFLAG
Trigger: GCCTGCCAGGAAATAAATTCAAATACAGTATGAGCT...TTTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp ATCAATTGTTACAAGCCTGATGGAAGTATGTACTTATATGTATATGTGCGATGGAGCCAGCCAACTTTCTaGAAGATGGTATTCTACAGC +
Preference number: 4 (lower is better)
Translates to: INCYKPDGSMYLYVYVRWSQPTF*KMVFYS
Trigger: GCTGTAGAATACCATCTTTCAGAAAGTTGGCTGGCT...CCATCGCACATATACATATAAGTACATACTTCCATCAGGCTTGTAACAATTGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR TCA 90 bp GTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACCAGGCCTTATTATGGGTTGTCCCTaGTCTTTTCATTCTTTCTGT +
Preference number: 4 (lower is better)
Translates to: VMYQVLFHGFKKDLEPGLIMGCP*SFHSFC
Trigger: ACAGAAAGAATGAAAAGATCAGGGACAACCCATAAT...AAGGCCTGGTTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR TCA 90 bp TTGACCATACTGAATAAGGACATGGTGAGTTTGAACTTTGCCCTACTACAAAGACAACAGTTTGCACTTTaGTCACTACTGTTCTCTGAA +
Preference number: 4 (lower is better)
Translates to: LTILNKDMVSLNFALLQRQQFAL*SLLFSE
Trigger: TTCAGAGAACAGTAGTGATCAAAGTGCAAACTGTTG...TCTTTGTAGTAGGGCAAAGTTCAAACTCACCATGTCCTTATTCAGTATGGTCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR TCA 90 bp GATAAAGAAACCGAAGCTCACACAAGACCACAAAGCAAGATTTTGCTGAGTCAAATTCTAGATTCAAGTTaGGTATGGTGCAGGCATTTT +
Preference number: 4 (lower is better)
Translates to: DKETEAHTRPQSKILLSQILDSS*VWCRHF
Trigger: AAAATGCCTGCACCATACTCAACTTGAATCTAGAAT...TTGACTCAGCAAAATCTTGCTTTGTGGTCTTGTGTGAGCTTCGGTTTCTTTATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439170.2
CDS-3UTR GCA 90 bp TCTGTTAGGGTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACTCTCTGTTCATGAGTaGAAACTTGCAGGGATCATT +
Preference number: 4 (lower is better)
Translates to: SVRVMYQVLFHGFKKDLELSVHE*KLAGII
Trigger: AATGATCCCTGCAAGTTTGCACTCATGAACAGAGAG...TTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCACCCTAACAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp ATCAATTGTTACAAGCCTGATGGAAGTATGTACTTATATGTATATGTGCGATGGAATGGGCGATTGCAGTaGATTCAAAAAGTCTCGCTG +
Preference number: 4 (lower is better)
Translates to: INCYKPDGSMYLYVYVRWNGRLQ*IQKVSL
Trigger: CAGCGAGACTTTTTGAATGCACTGCAATCGCCCATT...CCATCGCACATATACATATAAGTACATACTTCCATCAGGCTTGTAACAATTGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR GCA 90 bp TATACACCAGAAAGCAGCATTGGCCTCAAAGTACAATTAGTCCTTTTAGTTCAGGGTCATTTGTTGCTATaGAGGTATAAATCCCACTGT +
Preference number: 4 (lower is better)
Translates to: YTPESSIGLKVQLVLLVQGHLLL*RYKSHC
Trigger: ACAGTGGGATTTATACCTGCATAGCAACAAATGACC...CTGAACTAAAAGGACTAATTGTACTTTGAGGCCAATGCTGCTTTCTGGTGTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp TCTGTTAGGGTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAAAATCTCTGGCAGCATTaGTCACACCACAGAAGTATT +
Preference number: 4 (lower is better)
Translates to: SVRVMYQVLFHGFKKDLENLWQH*SHHRSI
Trigger: AATACTTCTGTGGTGTGAGCAATGCTGCCAGAGATT...TTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCACCCTAACAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp GTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACCAGGCCTTCATGGTGACAGGTATTaGAATCTCAGTTACAACTTA +
Preference number: 4 (lower is better)
Translates to: VMYQVLFHGFKKDLEPGLHGDRY*NLSYNL
Trigger: TAAGTTGTAACTGAGATTGCAATACCTGTCACCATG...AAGGCCTGGTTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp TCTGTTAGGGTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAAGGTGAGTTTGAACTTTaGCCTACTACAAAGACCTCT +
Preference number: 4 (lower is better)
Translates to: SVRVMYQVLFHGFKKDLEGEFEL*PTTKTS
Trigger: AGAGGTCTTTGTAGTAGGGCAAAGTTCAAACTCACC...TTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCACCCTAACAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR CCA 90 bp TATACACCAGAAAGCAGCATTGGCCTCAAAGTACAATTAGTCCTTTTAGTTCAGATTTCCTTATCTCCGTaGCATGAATGTGGCCTTTTT +
Preference number: 4 (lower is better)
Translates to: YTPESSIGLKVQLVLLVQISLSP*HECGLF
Trigger: AAAAAGGCCACATTCATGCCACGGAGATAAGGAAAT...CTGAACTAAAAGGACTAATTGTACTTTGAGGCCAATGCTGCTTTCTGGTGTATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp TCTGTTAGGGTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAAGCTTGGTTTCAATGTTaGAGGCTTTCAGCACTGTTT +
Preference number: 4 (lower is better)
Translates to: SVRVMYQVLFHGFKKDLEAWFQC*RLSALF
Trigger: AAACAGTGCTGAAAGCCTCCAACATTGAAACCAAGC...TTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCACCCTAACAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp TCTGTTAGGGTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAAAATCTGTCTTGCTCCTaGATACACTTTTCCAGTTCC +
Preference number: 4 (lower is better)
Translates to: SVRVMYQVLFHGFKKDLENLSCS*IHFSSS
Trigger: GGAACTGGAAAAGTGTATCCAGGAGCAAGACAGATT...TTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCACCCTAACAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp TCTGTTAGGGTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAATGTCATTGCAGCGTTTaGGAACAAGGCACATTAACT +
Preference number: 4 (lower is better)
Translates to: SVRVMYQVLFHGFKKDLECHCSV*EQGTLT
Trigger: AGTTAATGTGCCTTGTTCCCAAACGCTGCAATGACA...TTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCACCCTAACAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp TTATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAATCTGGGGCCACTTCTTaGATGAAATTTGGATTTAAG +
Preference number: 4 (lower is better)
Translates to: LFTVTFSLALVHTARLCESGATS*MKFGFK
Trigger: CTTAAATCCAAATTTCATCCAAGAAGTGGCCCCAGA...TTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp GTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACCAGGCCTTTTTAAAAGGCCTATATaGCTGCCTCCTTTTAGTAAG +
Preference number: 4 (lower is better)
Translates to: VMYQVLFHGFKKDLEPGLFKRPI*LPPFSK
Trigger: CTTACTAAAAGGAGGCAGCCATATAGGCCTTTTAAA...AAGGCCTGGTTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp TATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAAACCAGAAAGCAGCATTaGCCTCAAAGTACAATTAGT +
Preference number: 4 (lower is better)
Translates to: YLQSHSVLLWFTLHVYVKTRKQH*PQSTIS
Trigger: ACTAATTGTACTTTGAGGCCAATGCTGCTTTCTGGT...TTTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp AGCAGAAACTCAACTTGTTATAAAAACTCAGAATGGCTCAGCAGGGGGATCTTGCTAATGATTGTACCTTaGCTCCAGTTAACAAAATCA +
Preference number: 4 (lower is better)
Translates to: SRNSTCYKNSEWLSRGILLMIVP*LQLTKS
Trigger: TGATTTTGTTAACTGGAGCCAAGGTACAATCATTAG...CAAGATCCCCCTGCTGAGCCATTCTGAGTTTTTATAACAAGTTGAGTTTCTGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000291478.9
3UTR CAA 72 bp AATTCATTGACCATACTGAATAAGGACATGGTGAGTTaGAACTTTGCCCTACTACAAAGACCTCTTACGTAC +
Preference number: 4 (lower is better)
Translates to: NSLTILNKDMVS*NFALLQRPLTY
Trigger: GTACGTAAGAGGTCTTTGTAGTAGGGCAAAGTTCAAACTCACCATGTCCTTATTCAGTATGGTCAATGAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR TCA 90 bp TCTGTTAGGGTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACTCCTTTCAGGTGAATaGTCCTTTCTTGAATCACTT +
Preference number: 4 (lower is better)
Translates to: SVRVMYQVLFHGFKKDLELLSGE*SFLESL
Trigger: AAGTGATTCAAGAAAGGATCATTCACCTGAAAGGAG...TTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCACCCTAACAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp TATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAATTGCGGGTAGCTTTGTaGATGCATTTCTTTACTATA +
Preference number: 4 (lower is better)
Translates to: YLQSHSVLLWFTLHVYVKLRVAL*MHFFTI
Trigger: TATAGTAAAGAAATGCATTCACAAAGCTACCCGCAA...TTTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp TCTGTTAGGGTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAATTGAAGTCATTCATCTaGCGAAGCAAGTCTTCATTC +
Preference number: 4 (lower is better)
Translates to: SVRVMYQVLFHGFKKDLELKSFI*RSKSSF
Trigger: GAATGAAGACTTGCTTCGGCAGATGAATGACTTCAA...TTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCACCCTAACAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp TTATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAACTTCTGTGACCCTTTaGCTCTTTATTTCTTCAGAA +
Preference number: 4 (lower is better)
Translates to: LFTVTFSLALVHTARLCETSVTL*LFISSE
Trigger: TTCTGAAGAAATAAAGAGGCAAAGGGTCACAGAAGT...TTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp TTATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAACATGGTGACAGGTATTaGAATCTCAGTTACAACTTA +
Preference number: 4 (lower is better)
Translates to: LFTVTFSLALVHTARLCEHGDRY*NLSYNL
Trigger: TAAGTTGTAACTGAGATTGCAATACCTGTCACCATG...TTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp AAGGAAGAAGGTCTACATTCCTCGAAACTCATCCAGCACAATTCATTGACCATATCCTCCTGTATTAAATaGATGGGACAAAGTTTTAGT +
Preference number: 4 (lower is better)
Translates to: KEEGLHSSKLIQHNSLTISSCIK*MGQSFS
Trigger: ACTAAAACTTTGTCCCATGCATTTAATACAGGAGGA...TATGGTCAATGAATTGTGCTGGATGAGTTTCGAGGAATGTAGACCTTCTTCCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR CCA 90 bp TATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAAAATAACTCCTTGTTGTaGCTTATCCAGTCAAACATC +
Preference number: 4 (lower is better)
Translates to: YLQSHSVLLWFTLHVYVKNNSLL*LIQSNI
Trigger: GATGTTTGACTGGATAAGCCACAACAAGGAGTTATT...TTTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp TATACACCAGAAAGCAGCATTGGCCTCAAAGTACAATTAGTCCTTTTAGTTCAGAATAACTCCTTGTTGTaGCTTATCCAGTCAAACATC +
Preference number: 4 (lower is better)
Translates to: YTPESSIGLKVQLVLLVQNNSLL*LIQSNI
Trigger: GATGTTTGACTGGATAAGCCACAACAAGGAGTTATT...CTGAACTAAAAGGACTAATTGTACTTTGAGGCCAATGCTGCTTTCTGGTGTATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp TATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAATCATGCTGCTTCTCATaGAGAAATTCCAATAACTCT +
Preference number: 4 (lower is better)
Translates to: YLQSHSVLLWFTLHVYVKSCCFS*RNSNNS
Trigger: AGAGTTATTGGAATTTCTCCATGAGAAGCAGCATGA...TTTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp TTATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAGAAATCAGAAAGTGTTaGTACGTTGTTCATAGGAAC +
Preference number: 4 (lower is better)
Translates to: LFTVTFSLALVHTARLCEEIRKC*YVVHRN
Trigger: GTTCCTATGAACAACGTACCAACACTTTCTGATTTC...TTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp GTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACCAGGCCTTCAACTTTCTGAAAGATaGTATTCTACAGCTGTAGAA +
Preference number: 4 (lower is better)
Translates to: VMYQVLFHGFKKDLEPGLQLSER*YSTAVE
Trigger: TTCTACAGCTGTAGAATACCATCTTTCAGAAAGTTG...AAGGCCTGGTTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp TTATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAATTTAAAAGGCCTATATaGCTGCCTCCTTTTAGTAAG +
Preference number: 4 (lower is better)
Translates to: LFTVTFSLALVHTARLCEFKRPI*LPPFSK
Trigger: CTTACTAAAAGGAGGCAGCCATATAGGCCTTTTAAA...TTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR TCA 90 bp ATCAATTGTTACAAGCCTGATGGAAGTATGTACTTATATGTATATGTGCGATGGTACATTGTTTATGGCTaGGAGAGACCTGAAGGATAT +
Preference number: 4 (lower is better)
Translates to: INCYKPDGSMYLYVYVRWYIVYG*ERPEGY
Trigger: ATATCCTTCAGGTCTCTCTCAGCCATAAACAATGTA...CCATCGCACATATACATATAAGTACATACTTCCATCAGGCTTGTAACAATTGAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR GCA 90 bp TATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAATTCATTCTCCTTCAGTaGATAGTAATCTTTGATCAC +
Preference number: 4 (lower is better)
Translates to: YLQSHSVLLWFTLHVYVKFILLQ*IVIFDH
Trigger: GTGATCAAAGATTACTATGCACTGAAGGAGAATGAA...TTTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR GCA 90 bp TATACACCAGAAAGCAGCATTGGCCTCAAAGTACAATTAGTCCTTTTAGTTCAGCAAAACGACATTGTGTaGATACAAAATGAACAACAG +
Preference number: 4 (lower is better)
Translates to: YTPESSIGLKVQLVLLVQQNDIV*IQNEQQ
Trigger: CTGTTGTTCATTTTGTATGCACACAATGTCGTTTTG...CTGAACTAAAAGGACTAATTGTACTTTGAGGCCAATGCTGCTTTCTGGTGTATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR CCA 90 bp TATACACCAGAAAGCAGCATTGGCCTCAAAGTACAATTAGTCCTTTTAGTTCAGCAACTTTCTGAAAGATaGTATTCTACAGCTGTAGAA +
Preference number: 4 (lower is better)
Translates to: YTPESSIGLKVQLVLLVQQLSER*YSTAVE
Trigger: TTCTACAGCTGTAGAATACCATCTTTCAGAAAGTTG...CTGAACTAAAAGGACTAATTGTACTTTGAGGCCAATGCTGCTTTCTGGTGTATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CCA 90 bp TCTGTTAGGGTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAAGTTAGTTTGGCTTTGTaGATGTCAAAAGACAGCAAA +
Preference number: 4 (lower is better)
Translates to: SVRVMYQVLFHGFKKDLEVSLAL*MSKDSK
Trigger: TTTGCTGTCTTTTGACATCCACAAAGCCAAACTAAC...TTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCACCCTAACAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000291478.9
3UTR CAA 72 bp TGTACAGATGTACATATATCCATATTTTCCAACAGTTaGCACTTTGATCACTACTGTTCTCTGAACAGGATC +
Preference number: 4 (lower is better)
Translates to: CTDVHISIFSNS*HFDHYCSLNRI
Trigger: GATCCTGTTCAGAGAACAGTAGTGATCAAAGTGCAAACTGTTGGAAAATATGGATATATGTACATCTGTACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS GCA 90 bp ACTTCAGCGCCGCCGCCCGAGAGCCGGCTCCCGCCCTCCCCGCTGTaGTCTCCCCGCACCGCGGCCGCAGCTCTGACTTACTGGGAGCCA +
Preference number: 5 (lower is better)
Translates to: TSAPPPESRLPPSPL*SPRTAAAALTYWEP
Trigger: TGGCTCCCAGTAAGTCAGAGCTGCGGCCGCGGTGCGGGGAGAGCACAGCGGGGAGGGCGGGAGCCGGCTCTCGGGCGGCGGCGCTGAAGT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS GCA 90 bp AGTCAGCACTGCCCGGGATGCAGTTGCGTCCTGAGAAGCCGTCGCTaGAGCGGATGCACTGCAGCAGCCGCTGCCCCTCCCGGTCCAGCT +
Preference number: 5 (lower is better)
Translates to: SQHCPGCSCVLRSRR*SGCTAAAAAPPGPA
Trigger: AGCTGGACCGGGAGGGGCAGCGGCTGCTGCAGTGCATCCGCTGCAGCGACGGCTTCTCAGGACGCAACTGCATCCCGGGCAGTGCTGACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000240874.7
ENST00000354186.8
ENST00000360013.7
ENST00000460856.5
ENST00000498499.1
ENST00000682506.1
ENST00000683124.1
ENST00000683592.1
ENST00000684186.1
ENST00000684276.1
CDS CCA 90 bp CCATCTCCACGCTGCTTCGGGAGTGTGAGATGCACAGGGCGCTGCTaGGGACCAGACCCTCCAAGGGCGGGCTCCGTTCGGTGGTACGGA +
Preference number: 5 (lower is better)
Translates to: PSPRCFGSVRCTGRC*GPDPPRAGSVRWYG
Trigger: TCCGTACCACCGAACGGAGCCCGCCCTTGGAGGGTCTGGTCCCCAGCAGCGCCCTGTGCATCTCACACTCCCGAAGCAGCGTGGAGATGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000354186.8
ENST00000360013.7
ENST00000393496.5
ENST00000471431.1
ENST00000682506.1
ENST00000683592.1
ENST00000684360.1
CDS GCA 90 bp AGTCCATCTCCACGCTGCTTCGGGAGTGTGAGATGCACAGGGCGCTaGTGGGGACCAGACCCTCCAAGGGCGGGCTCCGTTCGGTGGTAC +
Preference number: 5 (lower is better)
Translates to: SPSPRCFGSVRCTGR*WGPDPPRAGSVRWY
Trigger: GTACCACCGAACGGAGCCCGCCCTTGGAGGGTCTGGTCCCCAGCAGCGCCCTGTGCATCTCACACTCCCGAAGCAGCGTGGAGATGGACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000354186.8
ENST00000360013.7
ENST00000393496.5
ENST00000471431.1
ENST00000682506.1
ENST00000683592.1
ENST00000684360.1
CDS GCA 90 bp AGGGGAAGAAGCAGTCCATCTCCACGCTGCTTCGGGAGTGTGAGATaGACAGGGCGCTGCTGGGGACCAGACCCTCCAAGGGCGGGCTCC +
Preference number: 5 (lower is better)
Translates to: RGRSSPSPRCFGSVR*TGRCWGPDPPRAGS
Trigger: GGAGCCCGCCCTTGGAGGGTCTGGTCCCCAGCAGCGCCCTGTGCATCTCACACTCCCGAAGCAGCGTGGAGATGGACTGCTTCTTCCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000354186.8
ENST00000360013.7
ENST00000393496.5
ENST00000471431.1
ENST00000682506.1
ENST00000683592.1
ENST00000684360.1
CDS GCA 90 bp CCGCCTCTCAGCAAGCGAGCAGCCTGCAGGCGGGCACCAGCTAGGTaGCTCATCCACCCCTGGGATTTCTCAGAGGTGCAGTGTCCCTGG +
Preference number: 5 (lower is better)
Translates to: PPLSKRAACRRAPAR*LIHPWDFSEVQCPW
Trigger: CCAGGGACACTGCACCTCTGAGAAATCCCAGGGGTGGATGAGGCACCTAGCTGGTGCCCGCCTGCAGGCTGCTCGCTTGCTGAGAGGCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000682540.1
ENST00000684410.1
CDS-3UTR CAA 90 bp GGAGTCCTGGTGGGAGGTCCCAACGGTGCCACGGCTAACCCGGTGAGCTGCAGGCGGGTGGAGTGCAGCTaGTCCAGGAGACTGGTGATC +
Preference number: 5 (lower is better)
Translates to: GVLVGGPNGATANPVSCRRVECS*SRRLVI
Trigger: GATCACCAGTCTCCTGGACAAGCTGCACTCCACCCG...CCTGCAGCTCACCGGGTTAGCCGTGGCACCGTTGGGACCTCCCACCAGGACTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CAA 90 bp CTGGTGGGAGGTCCCAACGGTGCCACGGCTAACCCGGTGAGCTGCAGGGACAAGTTGGCGTCCCGCAGCTaGACCTCCCGATCCGAAAGG +
Preference number: 5 (lower is better)
Translates to: LVGGPNGATANPVSCRDKLASRS*TSRSER
Trigger: CCTTTCGGATCGGGAGGTCAAGCTGCGGGACGCCAA...CTTGTCCCTGCAGCTCACCGGGTTAGCCGTGGCACCGTTGGGACCTCCCACCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS TCA 90 bp CACCAAGGGGAAGAAGCAGTCCATCTCCACGCTGCTTCGGGAGTGTaGGATGCACAGGGCGCTGCTGGGGACCAGACCCTCCAAGGGCGG +
Preference number: 5 (lower is better)
Translates to: HQGEEAVHLHAASGV*DAQGAAGDQTLQGR
Trigger: CCGCCCTTGGAGGGTCTGGTCCCCAGCAGCGCCCTGTGCATCTCACACTCCCGAAGCAGCGTGGAGATGGACTGCTTCTTCCCCTTGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000354186.8
ENST00000360013.7
ENST00000393496.5
ENST00000471431.1
ENST00000682506.1
ENST00000683592.1
ENST00000684360.1
CDS GCA 90 bp TTCCGGGCTAGCATCTCCTGGAGGTCCTCGAGGCGCGAGAGCAGGTaGACGGCGCTGTTGAAGAACTCCTCCAGGGAGAGCCGCAGTTCG +
Preference number: 5 (lower is better)
Translates to: FRASISWRSSRRESR*TALLKNSSRESRSS
Trigger: CGAACTGCGGCTCTCCCTGGAGGAGTTCTTCAACAGCGCCGTGCACCTGCTCTCGCGCCTCGAGGACCTCCAGGAGATGCTAGCCCGGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000240874.7
ENST00000354186.8
ENST00000360013.7
ENST00000460856.5
ENST00000498499.1
ENST00000682506.1
ENST00000683124.1
ENST00000683592.1
ENST00000684186.1
ENST00000684276.1
CDS GCA 90 bp CCTGCTGGAAGACGCAGAGCTGCAGCCGCTGGTGGAGCCGCACCTTaGGGTGCTGCCAGATGCTCTCCAGCCGTCGCTGGTGATGTAACA +
Preference number: 5 (lower is better)
Translates to: PAGRRRAAAAGGAAP*GAARCSPAVAGDVT
Trigger: TGTTACATCACCAGCGACGGCTGGAGAGCATCTGGCAGCACCGCAAGGTGCGGCTCCACCAGCGGCTGCAGCTCTGCGTCTTCCAGCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000240874.7
ENST00000354186.8
ENST00000360013.7
ENST00000460856.5
ENST00000682506.1
ENST00000683124.1
ENST00000683592.1
ENST00000684186.1
ENST00000684276.1
CDS-3UTR CAA 90 bp GGAGTCCTGGTGGGAGGTCCCAACGGTGCCACGGCTAACCCGGTGAGCTGCAGGTTGATGAGGTCCCACTaGGAGCCCCGCATGTCGATG +
Preference number: 5 (lower is better)
Translates to: GVLVGGPNGATANPVSCRLMRSH*EPRMSM
Trigger: CATCGACATGCGGGGCTCCAAGTGGGACCTCATCAA...CCTGCAGCTCACCGGGTTAGCCGTGGCACCGTTGGGACCTCCCACCAGGACTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CAA 90 bp CTGGTGGGAGGTCCCAACGGTGCCACGGCTAACCCGGTGAGCTGCAGGGACAAGAGGTGCACGGCGCTGTaGAAGAACTCCTCCAGGGAG +
Preference number: 5 (lower is better)
Translates to: LVGGPNGATANPVSCRDKRCTAL*KNSSRE
Trigger: CTCCCTGGAGGAGTTCTTCAACAGCGCCGTGCACCT...CTTGTCCCTGCAGCTCACCGGGTTAGCCGTGGCACCGTTGGGACCTCCCACCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CAA 90 bp GGAGTCCTGGTGGGAGGTCCCAACGGTGCCACGGCTAACCCGGTGAGCTGCAGGGACAAAGAGCTGGCATaGACCAGGCTGGCGTTGAGC +
Preference number: 5 (lower is better)
Translates to: GVLVGGPNGATANPVSCRDKELA*TRLALS
Trigger: GCTCAACGCCAGCCTGGTCAATGCCAGCTCTTTGTC...CCTGCAGCTCACCGGGTTAGCCGTGGCACCGTTGGGACCTCCCACCAGGACTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CAA 90 bp GGAGTCCTGGTGGGAGGTCCCAACGGTGCCACGGCTAACCCGGTGAGCTGCAGGTCTGGGGGAAGTACATaGGGCCATTGGGCCTCTCAC +
Preference number: 5 (lower is better)
Translates to: GVLVGGPNGATANPVSCRSGGST*GHWASH
Trigger: GTGAGAGGCCCAATGGCCCAATGTACTTCCCCCAGA...CCTGCAGCTCACCGGGTTAGCCGTGGCACCGTTGGGACCTCCCACCAGGACTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS TCA 90 bp CTCTGGCTGCCCGCTGTTGCTGGAGGATGCCTGGGGTGCCCTCTGTaGGGACACCAGTGTCGGATCCAGAGTGCTTGCTCCAGGGTTCTC +
Preference number: 5 (lower is better)
Translates to: LWLPAVAGGCLGCPL*GHQCRIQSACSRVL
Trigger: GAGAACCCTGGAGCAAGCACTCTGGATCCGACACTGGTGTCCTCACAGAGGGCACCCCAGGCATCCTCCAGCAACAGCGGGCAGCCAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684441.1
CDS-3UTR CAA 90 bp GGCAGCAGGAGCCTGGGCGTACCTGCTGTTCTGAGTGGGATCTGGGGGAAGTACGGAGGCCGGAATCACTaGACGCTGGGCTCGCACACA +
Preference number: 5 (lower is better)
Translates to: GSRSLGVPAVLSGIWGKYGGRNH*TLGSHT
Trigger: TGTGTGCGAGCCCAGCGTCAAGTGATTCCGGCCTCC...GTACTTCCCCCAGATCCCACTCAGAACAGCAGGTACGCCCAGGCTCCTGCTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CAA 90 bp CTGGTGGGAGGTCCCAACGGTGCCACGGCTAACCCGGTGAGCTGCAGGGACAAGGCTTCCTGCAGCGTTTaGAGGAGGGGCTTGATGAGG +
Preference number: 5 (lower is better)
Translates to: LVGGPNGATANPVSCRDKASCSV*RRGLMR
Trigger: CCTCATCAAGCCCCTCCTCAAAACGCTGCAGGAAGC...CTTGTCCCTGCAGCTCACCGGGTTAGCCGTGGCACCGTTGGGACCTCCCACCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CAA 90 bp CTGGTGGGAGGTCCCAACGGTGCCACGGCTAACCCGGTGAGCTGCAGGGACAAGCCTTCACTGCACATCTaGCACCAGGCATCCACTCCC +
Preference number: 5 (lower is better)
Translates to: LVGGPNGATANPVSCRDKPSLHI*HQASTP
Trigger: GGGAGTGGATGCCTGGTGCAAGATGTGCAGTGAAGG...CTTGTCCCTGCAGCTCACCGGGTTAGCCGTGGCACCGTTGGGACCTCCCACCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CAA 90 bp GGAGTCCTGGTGGGAGGTCCCAACGGTGCCACGGCTAACCCGGTGAGCTGCAGGTCTGGTGGTGGTGGATaGCCAGCTCTAGGTCTTGCA +
Preference number: 5 (lower is better)
Translates to: GVLVGGPNGATANPVSCRSGGGG*PALGLA
Trigger: TGCAAGACCTAGAGCTGGCAATCCACCACCACCAGA...CCTGCAGCTCACCGGGTTAGCCGTGGCACCGTTGGGACCTCCCACCAGGACTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CAA 90 bp GGGGGAAGTACATTGGGCCATTGGGCCTCTCACAGGTCCCTACTGCCCCACCATTGGTGGAGCCGCACCTaGCGGTGCTGCCAGATGCTC +
Preference number: 5 (lower is better)
Translates to: GGSTLGHWASHRSLLPHHWWSRT*RCCQML
Trigger: GAGCATCTGGCAGCACCGCAAGGTGCGGCTCCACCA...ATGGTGGGGCAGTAGGGACCTGTGAGAGGCCCAATGGCCCAATGTACTTCCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CAA 90 bp GGCAGCAGGAGCCTGGGCGTACCTGCTGTTCTGAGTGGGATCTGGGGGAAGTACCCTGCGCACGAAGTCTaGGATGCGCACCTCCAGGTG +
Preference number: 5 (lower is better)
Translates to: GSRSLGVPAVLSGIWGKYPAHEV*DAHLQV
Trigger: CACCTGGAGGTGCGCATCCAAGACTTCGTGCGCAGG...GTACTTCCCCCAGATCCCACTCAGAACAGCAGGTACGCCCAGGCTCCTGCTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CAA 90 bp GGAGTCCTGGTGGGAGGTCCCAACGGTGCCACGGCTAACCCGGTGAGCTGCAGGCTGTGGGGTGTTTTGTaGTTGGACACAGCCGAGTCC +
Preference number: 5 (lower is better)
Translates to: GVLVGGPNGATANPVSCRLWGVL*LDTAES
Trigger: GGACTCGGCTGTGTCCAACAACAAAACACCCCACAG...CCTGCAGCTCACCGGGTTAGCCGTGGCACCGTTGGGACCTCCCACCAGGACTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CAA 90 bp CTGGTGGGAGGTCCCAACGGTGCCACGGCTAACCCGGTGAGCTGCAGGGACAAGTCATTGACTTCGTGGTaGGCGTCCCGCAGCTTGACC +
Preference number: 5 (lower is better)
Translates to: LVGGPNGATANPVSCRDKSLTSW*ASRSLT
Trigger: GGTCAAGCTGCGGGACGCCAACCACGAAGTCAATGA...CTTGTCCCTGCAGCTCACCGGGTTAGCCGTGGCACCGTTGGGACCTCCCACCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CAA 90 bp GGAGTCCTGGTGGGAGGTCCCAACGGTGCCACGGCTAACCCGGTGAGCTGCAGGCACATCCTCAGGCAGTaGCTCGTACTTCTCCAGCTC +
Preference number: 5 (lower is better)
Translates to: GVLVGGPNGATANPVSCRHILRQ*LVLLQL
Trigger: GAGCTGGAGAAGTACGAGCAACTGCCTGAGGATGTG...CCTGCAGCTCACCGGGTTAGCCGTGGCACCGTTGGGACCTCCCACCAGGACTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CAA 90 bp GGAGTCCTGGTGGGAGGTCCCAACGGTGCCACGGCTAACCCGGTGAGCTGCAGGAAGTACATTGGGCCATaGGGCCTCTCACAGGTCCCT +
Preference number: 5 (lower is better)
Translates to: GVLVGGPNGATANPVSCRKYIGP*GLSQVP
Trigger: AGGGACCTGTGAGAGGCCCAATGGCCCAATGTACTT...CCTGCAGCTCACCGGGTTAGCCGTGGCACCGTTGGGACCTCCCACCAGGACTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CAA 90 bp CTGGTGGGAGGTCCCAACGGTGCCACGGCTAACCCGGTGAGCTGCAGGGACAAGCTGGTAGGGTGGTCTTaGAACCAGAGACCTCGGGAG +
Preference number: 5 (lower is better)
Translates to: LVGGPNGATANPVSCRDKLVGWS*NQRPRE
Trigger: CTCCCGAGGTCTCTGGTTCAAAGACCACCCTACCAG...CTTGTCCCTGCAGCTCACCGGGTTAGCCGTGGCACCGTTGGGACCTCCCACCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS TCA 90 bp TCTCCTGGAGGTCCTCGAGGCGCGAGAGCAGGTGCACGGCGCTGTTaGAGAACTCCTCCAGGGAGAGCCGCAGTTCGATCCACTCCTCAT +
Preference number: 5 (lower is better)
Translates to: SPGGPRGARAGARRC*RTPPGRAAVRSTPH
Trigger: ATGAGGAGTGGATCGAACTGCGGCTCTCCCTGGAGGAGTTCTTCAACAGCGCCGTGCACCTGCTCTCGCGCCTCGAGGACCTCCAGGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000240874.7
ENST00000354186.8
ENST00000360013.7
ENST00000460856.5
ENST00000498499.1
ENST00000682506.1
ENST00000683124.1
ENST00000683592.1
ENST00000684186.1
ENST00000684276.1
CDS TCA 90 bp TTGGAGTCCTGGTGGGAGGTCCCAACGGTGCCACGGCTAACCCGGTaGGCTGCAGGGACAAGTCCCAGGATGCGCGCTAAACGTAAGTGG +
Preference number: 5 (lower is better)
Translates to: LESWWEVPTVPRLTR*AAGTSPRMRAKRKW
Trigger: CCACTTACGTTTAGCGCGCATCCTGGGACTTGTCCCTGCAGCTCACCGGGTTAGCCGTGGCACCGTTGGGACCTCCCACCAGGACTCCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000240874.7
ENST00000460856.5
ENST00000682277.1
ENST00000682540.1
ENST00000682695.1
ENST00000683146.1
ENST00000683356.1
ENST00000684276.1
ENST00000684374.1
ENST00000684382.1
CDS GCA 90 bp GCTGTGGCCGTGAGGGATTCGGAGTTCCCAGGGCTCAGGGGCCGCTaGAGCACATCAAGTAGTGCTTTGCCATCCTGGCTGACCTCTGTG +
Preference number: 5 (lower is better)
Translates to: AVAVRDSEFPGLRGR*STSSSALPSWLTSV
Trigger: CACAGAGGTCAGCCAGGATGGCAAAGCACTACTTGATGTGCTGCAGCGGCCCCTGAGCCCTGGGAACTCCGAATCCCTCACGGCCACAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000240874.7
ENST00000354186.8
ENST00000360013.7
ENST00000460856.5
ENST00000682506.1
ENST00000683124.1
ENST00000683592.1
ENST00000684186.1
ENST00000684276.1
CDS GCA 90 bp CCAGGAGAAGCTTCCGCTGCTCCACCCTGCGCACGAAGTCTTGGATaGGCACCTCCAGGTGTCGAGCTGCCTTGTAGATCTCCTCGGGGT +
Preference number: 5 (lower is better)
Translates to: PGEASAAPPCARSLG*APPGVELPCRSPRG
Trigger: ACCCCGAGGAGATCTACAAGGCAGCTCGACACCTGGAGGTGCGCATCCAAGACTTCGTGCGCAGGGTGGAGCAGCGGAAGCTTCTCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 24 transcripts:
ENST00000240874.7
ENST00000354186.8
ENST00000360013.7
ENST00000393501.5
ENST00000439170.2
ENST00000460856.5
ENST00000484224.6
ENST00000522553.6
ENST00000682277.1
ENST00000682506.1
ENST00000682540.1
ENST00000682575.1
ENST00000682636.1
ENST00000682674.1
ENST00000682695.1
ENST00000683124.1
ENST00000683512.1
ENST00000683592.1
ENST00000683827.1
ENST00000684186.1
ENST00000684276.1
ENST00000684374.1
ENST00000684382.1
ENST00000684410.1
CDS GCA 90 bp GCGGGGGAATGGTCGCTGGCAGGCTGGTACACCAGACACATGTTCTaGTGGTTGACGGCGAGGACCTGGACCACCTCACCTTGGCTCACA +
Preference number: 5 (lower is better)
Translates to: AGEWSLAGWYTRHMF*WLTARTWTTSPWLT
Trigger: TGTGAGCCAAGGTGAGGTGGTCCAGGTCCTCGCCGTCAACCAGCAGAACATGTGTCTGGTGTACCAGCCTGCCAGCGACCATTCCCCCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
ENST00000393496.5
ENST00000459915.2
ENST00000682290.1
ENST00000682363.1
ENST00000682506.1
ENST00000683592.1
ENST00000684360.1
CDS-3UTR CAA 90 bp GGAGTCCTGGTGGGAGGTCCCAACGGTGCCACGGCTAACCCGGTGAGCTGCAGGCCAACTCCAGTGTGTTaGCTGAGAAAGGCCTCACCA +
Preference number: 5 (lower is better)
Translates to: GVLVGGPNGATANPVSCRPTPVC*LRKASP
Trigger: TGGTGAGGCCTTTCTCAGCAAACACACTGGAGTTGG...CCTGCAGCTCACCGGGTTAGCCGTGGCACCGTTGGGACCTCCCACCAGGACTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CAA 90 bp GGAGTCCTGGTGGGAGGTCCCAACGGTGCCACGGCTAACCCGGTGAGCTGCAGGTTGACCAGGCTGGCGTaGAGCATTGACTCTCCATTG +
Preference number: 5 (lower is better)
Translates to: GVLVGGPNGATANPVSCRLTRLA*SIDSPL
Trigger: CAATGGAGAGTCAATGCTCAACGCCAGCCTGGTCAA...CCTGCAGCTCACCGGGTTAGCCGTGGCACCGTTGGGACCTCCCACCAGGACTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CAA 90 bp GGAGTCCTGGTGGGAGGTCCCAACGGTGCCACGGCTAACCCGGTGAGCTGCAGGCACCTTCTCCTTTGTTaGCTTGGCAGGCACCCTGAA +
Preference number: 5 (lower is better)
Translates to: GVLVGGPNGATANPVSCRHLLLC*LGRHPE
Trigger: TTCAGGGTGCCTGCCAAGCAAACAAAGGAGAAGGTG...CCTGCAGCTCACCGGGTTAGCCGTGGCACCGTTGGGACCTCCCACCAGGACTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CAA 90 bp CTGGTGGGAGGTCCCAACGGTGCCACGGCTAACCCGGTGAGCTGCAGGGACAAGCACCGAGGAACAAGGTaGCCATCCTTGTCACTGTCC +
Preference number: 5 (lower is better)
Translates to: LVGGPNGATANPVSCRDKHRGTR*PSLSLS
Trigger: GGACAGTGACAAGGATGGCAACCTTGTTCCTCGGTG...CTTGTCCCTGCAGCTCACCGGGTTAGCCGTGGCACCGTTGGGACCTCCCACCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CAA 90 bp CTGGTGGGAGGTCCCAACGGTGCCACGGCTAACCCGGTGAGCTGCAGGGACAAGCATCATCTCTGCCTCTaGCCTTGGTGTGGGGTTTCC +
Preference number: 5 (lower is better)
Translates to: LVGGPNGATANPVSCRDKHHLCL*PWCGVS
Trigger: GGAAACCCCACACCAAGGCAAGAGGCAGAGATGATG...CTTGTCCCTGCAGCTCACCGGGTTAGCCGTGGCACCGTTGGGACCTCCCACCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CAA 90 bp CTGGTGGGAGGTCCCAACGGTGCCACGGCTAACCCGGTGAGCTGCAGGGACAAGGCTGCTTCTAGGAGCTaGTCCGCATTGGTGTACGTA +
Preference number: 5 (lower is better)
Translates to: LVGGPNGATANPVSCRDKAASRS*SALVYV
Trigger: TACGTACACCAATGCGGACAAGCTCCTAGAAGCAGC...CTTGTCCCTGCAGCTCACCGGGTTAGCCGTGGCACCGTTGGGACCTCCCACCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CAA 90 bp CTGGTGGGAGGTCCCAACGGTGCCACGGCTAACCCGGTGAGCTGCAGGGACAAGTTCCGCTTCTCTTCATaGACTTCGTGGTTGGCGTCC +
Preference number: 5 (lower is better)
Translates to: LVGGPNGATANPVSCRDKFRFSS*TSWLAS
Trigger: GGACGCCAACCACGAAGTCAATGAAGAGAAGCGGAA...CTTGTCCCTGCAGCTCACCGGGTTAGCCGTGGCACCGTTGGGACCTCCCACCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CAA 90 bp GGGGGAAGTACATTGGGCCATTGGGCCTCTCACAGGTCCCTACTGCCCCACCATGACCACAAGGCGAATTaGCAGGGATCGCCCTCCACG +
Preference number: 5 (lower is better)
Translates to: GGSTLGHWASHRSLLPHHDHKAN*QGSPST
Trigger: CGTGGAGGGCGATCCCTGCAAATTCGCCTTGTGGTC...ATGGTGGGGCAGTAGGGACCTGTGAGAGGCCCAATGGCCCAATGTACTTCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CAA 90 bp GGAGTCCTGGTGGGAGGTCCCAACGGTGCCACGGCTAACCCGGTGAGCTGCAGGTTTGCTTGGAACATGTaGCCCTCTGAGCAAAGGCTG +
Preference number: 5 (lower is better)
Translates to: GVLVGGPNGATANPVSCRFAWNM*PSEQRL
Trigger: CAGCCTTTGCTCAGAGGGCAACATGTTCCAAGCAAA...CCTGCAGCTCACCGGGTTAGCCGTGGCACCGTTGGGACCTCCCACCAGGACTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS GCA 90 bp ACTCGAGGAGGCCGGAATCACTTGACGCTGGGCTCGCACACAGCCTaGTCTAAGCAAATGCCTGCCTGCAAAGACAGCCACCAGTCCTCC +
Preference number: 5 (lower is better)
Translates to: TRGGRNHLTLGSHTA*SKQMPACKDSHQSS
Trigger: GGAGGACTGGTGGCTGTCTTTGCAGGCAGGCATTTGCTTAGAGCAGGCTGTGTGCGAGCCCAGCGTCAAGTGATTCCGGCCTCCTCGAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240874.7
ENST00000460856.5
ENST00000488825.5
CDS GCA 90 bp GGGAAGCCAACGAGGCACTTACTTGATGCTCCCGTCACTACTTTCTaGTGCTGTGGCTTTGGTGAGGGGCGCCAGGATGCTGCCTGGGAC +
Preference number: 5 (lower is better)
Translates to: GKPTRHLLDAPVTTF*CCGFGEGRQDAAWD
Trigger: GTCCCAGGCAGCATCCTGGCGCCCCTCACCAAAGCCACAGCAGCAGAAAGTAGTGACGGGAGCATCAAGTAAGTGCCTCGTTGGCTTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393496.5
ENST00000459915.2
ENST00000682363.1
ENST00000683592.1
ENST00000684360.1
CDS GCA 90 bp TGGTGTACGTATTCTGCCAGCAACAACAGTGAGGCAAAGTCAAGTTaGAGTCGCGCCTTCCAGCAGCCCACCCTGGGGCTCCCCGGAGCT +
Preference number: 5 (lower is better)
Translates to: WCTYSASNNSEAKSS*SRAFQQPTLGLPGA
Trigger: AGCTCCGGGGAGCCCCAGGGTGGGCTGCTGGAAGGCGCGACTGCAACTTGACTTTGCCTCACTGTTGTTGCTGGCAGAATACGTACACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000484224.6
ENST00000682540.1
ENST00000682674.1
ENST00000682695.1
ENST00000683512.1
ENST00000683827.1
ENST00000684374.1
ENST00000684382.1
ENST00000684410.1
CDS-3UTR CAA 90 bp GGCAGCAGGAGCCTGGGCGTACCTGCTGTTCTGAGTGGGATCTGGGGGAAGTACTCTGGTGGTGGTGGATaGCCAGCTCTAGGTCTTGCA +
Preference number: 5 (lower is better)
Translates to: GSRSLGVPAVLSGIWGKYSGGGG*PALGLA
Trigger: TGCAAGACCTAGAGCTGGCAATCCACCACCACCAGA...GTACTTCCCCCAGATCCCACTCAGAACAGCAGGTACGCCCAGGCTCCTGCTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CAA 90 bp CTGGTGGGAGGTCCCAACGGTGCCACGGCTAACCCGGTGAGCTGCAGGGACAAGACATCAAGTAGTGCTTaGCCATCCTGGCTGACCTCT +
Preference number: 5 (lower is better)
Translates to: LVGGPNGATANPVSCRDKTSSSA*PSWLTS
Trigger: AGAGGTCAGCCAGGATGGCAAAGCACTACTTGATGT...CTTGTCCCTGCAGCTCACCGGGTTAGCCGTGGCACCGTTGGGACCTCCCACCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CAA 90 bp GGCAGCAGGAGCCTGGGCGTACCTGCTGTTCTGAGTGGGATCTGGGGGAAGTACTGGGGTGTTTTGTTGTaGGACACAGCCGAGTCCCTG +
Preference number: 5 (lower is better)
Translates to: GSRSLGVPAVLSGIWGKYWGVLL*DTAESL
Trigger: CAGGGACTCGGCTGTGTCCAACAACAAAACACCCCA...GTACTTCCCCCAGATCCCACTCAGAACAGCAGGTACGCCCAGGCTCCTGCTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CAA 90 bp GGCAGCAGGAGCCTGGGCGTACCTGCTGTTCTGAGTGGGATCTGGGGGAAGTACCTGTGGGGTGTTTTGTaGTTGGACACAGCCGAGTCC +
Preference number: 5 (lower is better)
Translates to: GSRSLGVPAVLSGIWGKYLWGVL*LDTAES
Trigger: GGACTCGGCTGTGTCCAACAACAAAACACCCCACAG...GTACTTCCCCCAGATCCCACTCAGAACAGCAGGTACGCCCAGGCTCCTGCTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CAA 90 bp GGCAGCAGGAGCCTGGGCGTACCTGCTGTTCTGAGTGGGATCTGGGGGAAGTACCTGCTGTGGGGTGTTTaGTTGTTGGACACAGCCGAG +
Preference number: 5 (lower is better)
Translates to: GSRSLGVPAVLSGIWGKYLLWGV*LLDTAE
Trigger: CTCGGCTGTGTCCAACAACAAAACACCCCACAGCAG...GTACTTCCCCCAGATCCCACTCAGAACAGCAGGTACGCCCAGGCTCCTGCTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CAA 90 bp GGAGTCCTGGTGGGAGGTCCCAACGGTGCCACGGCTAACCCGGTGAGCTGCAGGACCTCAAAGGTCATGTaGTTCATGGCTAGCTTCCGT +
Preference number: 5 (lower is better)
Translates to: GVLVGGPNGATANPVSCRTSKVM*FMASFR
Trigger: ACGGAAGCTAGCCATGAACAACATGACCTTTGAGGT...CCTGCAGCTCACCGGGTTAGCCGTGGCACCGTTGGGACCTCCCACCAGGACTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS GCA 90 bp TTTTATTGTCTGAGGATGGGGTGCGCCCAGACCACAAGGCGAATTTaGAGGGATCGCCCTCCACGTGCTCGGTCACACCCAGCTCTGAGG +
Preference number: 5 (lower is better)
Translates to: FYCLRMGCAQTTRRI*RDRPPRARSHPALR
Trigger: CCTCAGAGCTGGGTGTGACCGAGCACGTGGAGGGCGATCCCTGCAAATTCGCCTTGTGGTCTGGGCGCACCCCATCCTCAGACAATAAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 18 transcripts:
ENST00000240874.7
ENST00000354186.8
ENST00000360013.7
ENST00000460856.5
ENST00000473056.1
ENST00000682277.1
ENST00000682506.1
ENST00000682540.1
ENST00000682575.1
ENST00000682695.1
ENST00000683146.1
ENST00000683356.1
ENST00000683592.1
ENST00000684276.1
ENST00000684360.1
ENST00000684374.1
ENST00000684382.1
ENST00000684410.1
CDS GCA 90 bp AAGCCAACGAGGCACTTACTTGATGCTCCCGTCACTACTTTCTGCTaGTGTGGCTTTGGTGAGGGGCGCCAGGATGCTGCCTGGGACCCA +
Preference number: 5 (lower is better)
Translates to: KPTRHLLDAPVTTFC*CGFGEGRQDAAWDP
Trigger: TGGGTCCCAGGCAGCATCCTGGCGCCCCTCACCAAAGCCACAGCAGCAGAAAGTAGTGACGGGAGCATCAAGTAAGTGCCTCGTTGGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393496.5
ENST00000459915.2
ENST00000682363.1
ENST00000683592.1
ENST00000684360.1
CDS GCA 90 bp GGGCACCAGCTAGGTGCCTCATCCACCCCTGGGATTTCTCAGAGGTaGAGTGTCCCTGGAAAGAAGTGGGGAGAGCGTAGAGAACCTCCA +
Preference number: 5 (lower is better)
Translates to: GHQLGASSTPGISQR*SVPGKKWGERREPP
Trigger: TGGAGGTTCTCTACGCTCTCCCCACTTCTTTCCAGGGACACTGCACCTCTGAGAAATCCCAGGGGTGGATGAGGCACCTAGCTGGTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000682540.1
ENST00000684410.1
CDS GCA 90 bp GCGCTCCCCACCATGTGTAGACAGTTGAGAGCTGGCTGTACTTTCTaGTTCCCGCTATTCTGGCCCATGGTGGGCCCTTCTGGTCCACTC +
Preference number: 5 (lower is better)
Translates to: ALPTMCRQLRAGCTF*FPLFWPMVGPSGPL
Trigger: GAGTGGACCAGAAGGGCCCACCATGGGCCAGAATAGCGGGAAGCAGAAAGTACAGCCAGCTCTCAACTGTCTACACATGGTGGGGAGCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684410.1
CDS-3UTR CAA 90 bp CTGGTGGGAGGTCCCAACGGTGCCACGGCTAACCCGGTGAGCTGCAGGGACAAGCATGTCCACAACTCTTaGGTGTGTGTGTGGAAGGAA +
Preference number: 5 (lower is better)
Translates to: LVGGPNGATANPVSCRDKHVHNS*VCVWKE
Trigger: TTCCTTCCACACACACACCAAAGAGTTGTGGACATG...CTTGTCCCTGCAGCTCACCGGGTTAGCCGTGGCACCGTTGGGACCTCCCACCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CAA 90 bp CTGGTGGGAGGTCCCAACGGTGCCACGGCTAACCCGGTGAGCTGCAGGGACAAGCCTTCCTTGATGACATaGAGTGTGGCATCTAGAGTG +
Preference number: 5 (lower is better)
Translates to: LVGGPNGATANPVSCRDKPSLMT*SVASRV
Trigger: CACTCTAGATGCCACACTCAATGTCATCAAGGAAGG...CTTGTCCCTGCAGCTCACCGGGTTAGCCGTGGCACCGTTGGGACCTCCCACCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CAA 90 bp GGCAGCAGGAGCCTGGGCGTACCTGCTGTTCTGAGTGGGATCTGGGGGAAGTACAGGAAGATGTCCAGCTaGATCTTCCGCTCGTGGAAC +
Preference number: 5 (lower is better)
Translates to: GSRSLGVPAVLSGIWGKYRKMSS*IFRSWN
Trigger: GTTCCACGAGCGGAAGATCAAGCTGGACATCTTCCT...GTACTTCCCCCAGATCCCACTCAGAACAGCAGGTACGCCCAGGCTCCTGCTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CAA 90 bp GGGGGAAGTACATTGGGCCATTGGGCCTCTCACAGGTCCCTACTGCCCCACCATCACATCCTCAGGCAGTaGCTCGTACTTCTCCAGCTC +
Preference number: 5 (lower is better)
Translates to: GGSTLGHWASHRSLLPHHHILRQ*LVLLQL
Trigger: GAGCTGGAGAAGTACGAGCAACTGCCTGAGGATGTG...ATGGTGGGGCAGTAGGGACCTGTGAGAGGCCCAATGGCCCAATGTACTTCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CAA 90 bp GGCAGCAGGAGCCTGGGCGTACCTGCTGTTCTGAGTGGGATCTGGGGGAAGTACTCTCTGCCTCTTGCCTaGGTGTGGGGTTTCCATGAA +
Preference number: 5 (lower is better)
Translates to: GSRSLGVPAVLSGIWGKYSLPLA*VWGFHE
Trigger: TTCATGGAAACCCCACACCAAGGCAAGAGGCAGAGA...GTACTTCCCCCAGATCCCACTCAGAACAGCAGGTACGCCCAGGCTCCTGCTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS TCA 90 bp CTACCACCTCACTCAGGACCAATGCTGCTGCGGCTTCATAGGCCCTaGAATGGCTCCCTACCCTGCTTGTCCTGGTTGGTGCCTAAGGGT +
Preference number: 5 (lower is better)
Translates to: LPPHSGPMLLRLHRP*NGSLPCLSWLVPKG
Trigger: ACCCTTAGGCACCAACCAGGACAAGCAGGGTAGGGAGCCATTTCAGGGCCTATGAAGCCGCAGCAGCATTGGTCCTGAGTGAGGTGGTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684410.1
CDS GCA 90 bp CGCCGCTTCTTCAAGGTCCAGAAATGCAGCACGCGATTCTCCCTCTaGAGGAGCTCACTCAGGATGGCTTTCACTTGTTGCTCGGGTCCC +
Preference number: 5 (lower is better)
Translates to: RRFFKVQKCSTRFSL*RSSLRMAFTCCSGP
Trigger: GGGACCCGAGCAACAAGTGAAAGCCATCCTGAGTGAGCTCCTGCAGAGGGAGAATCGCGTGCTGCATTTCTGGACCTTGAAGAAGCGGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 21 transcripts:
ENST00000240874.7
ENST00000354186.8
ENST00000360013.7
ENST00000393501.5
ENST00000460856.5
ENST00000484224.6
ENST00000682277.1
ENST00000682506.1
ENST00000682540.1
ENST00000682575.1
ENST00000682674.1
ENST00000682695.1
ENST00000683146.1
ENST00000683356.1
ENST00000683592.1
ENST00000683922.1
ENST00000684186.1
ENST00000684276.1
ENST00000684374.1
ENST00000684382.1
ENST00000684410.1
CDS GCA 90 bp AGAGGACAGAAAACCCTACCAGGGCACAGCCTCCTGCACCTTCACTaGACTGCTGCCCTCACGCCTCTCATAGTGCTAAGCCAGGGAGAT +
Preference number: 5 (lower is better)
Translates to: RGQKTLPGHSLLHLH*TAALTPLIVLSQGD
Trigger: ATCTCCCTGGCTTAGCACTATGAGAGGCGTGAGGGCAGCAGTGCAGTGAAGGTGCAGGAGGCTGTGCCCTGGTAGGGTTTTCTGTCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683922.1
CDS-3UTR CAA 90 bp CCCCATAACCCAGCCAGGGAAATAAGCCCAACTTCAGGACCTCTCAGAAATCAGCTGCCCGGGATGCAGTaGCGTCCTGAGAAGCCGTCG +
Preference number: 5 (lower is better)
Translates to: PHNPAREISPTSGPLRNQLPGMQ*RPEKPS
Trigger: CGACGGCTTCTCAGGACGCAACTGCATCCCGGGCAG...CTGATTTCTGAGAGGTCCTGAAGTTGGGCTTATTTCCCTGGCTGGGTTATGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CAA 90 bp GGCAGGCTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGCTGCCCGGGATGCAGTaGCGTCCTGAGAAGCCGTCG +
Preference number: 5 (lower is better)
Translates to: GRLSFQNNSELPVNLRGALPGMQ*RPEKPS
Trigger: CGACGGCTTCTCAGGACGCAACTGCATCCCGGGCAG...CGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAGCCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp GGCAGCAGGAGCCTGGGCGTACCTGCTGTTCTGAGTGGGATCTGGGGGAAGTACAGGTCTTCGCCTTCCTaGATGACATTGAGTGTGGCA +
Preference number: 5 (lower is better)
Translates to: GSRSLGVPAVLSGIWGKYRSSPS*MTLSVA
Trigger: TGCCACACTCAATGTCATCAAGGAAGGCGAAGACCT...GTACTTCCCCCAGATCCCACTCAGAACAGCAGGTACGCCCAGGCTCCTGCTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CAA 90 bp GGCAGCAGGAGCCTGGGCGTACCTGCTGTTCTGAGTGGGATCTGGGGGAAGTACAAGGCCACAGAGGCATaGACCAATTTTAGCCGGTCT +
Preference number: 5 (lower is better)
Translates to: GSRSLGVPAVLSGIWGKYKATEA*TNFSRS
Trigger: AGACCGGCTAAAATTGGTCAATGCCTCTGTGGCCTT...GTACTTCCCCCAGATCCCACTCAGAACAGCAGGTACGCCCAGGCTCCTGCTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS GCA 90 bp CTAGGTCTTGCATCTCGGATGGCAGACCACCTTCACTGCACATCTTaGACCAGGCATCCACTCCCGACAGGAACTGCTCAGCCTTCTGGT +
Preference number: 5 (lower is better)
Translates to: LGLASRMADHLHCTS*TRHPLPTGTAQPSG
Trigger: ACCAGAAGGCTGAGCAGTTCCTGTCGGGAGTGGATGCCTGGTGCAAGATGTGCAGTGAAGGTGGTCTGCCATCCGAGATGCAAGACCTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000240874.7
ENST00000354186.8
ENST00000360013.7
ENST00000460856.5
ENST00000682506.1
ENST00000683124.1
ENST00000683592.1
ENST00000684186.1
ENST00000684276.1
CDS GCA 90 bp TTGCCAGCTCTAGGTCTTGCATCTCGGATGGCAGACCACCTTCACTaGACATCTTGCACCAGGCATCCACTCCCGACAGGAACTGCTCAG +
Preference number: 5 (lower is better)
Translates to: LPALGLASRMADHLH*TSCTRHPLPTGTAQ
Trigger: CTGAGCAGTTCCTGTCGGGAGTGGATGCCTGGTGCAAGATGTGCAGTGAAGGTGGTCTGCCATCCGAGATGCAAGACCTAGAGCTGGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000240874.7
ENST00000354186.8
ENST00000360013.7
ENST00000460856.5
ENST00000682506.1
ENST00000683124.1
ENST00000683592.1
ENST00000684186.1
ENST00000684276.1
CDS GCA 90 bp CCCTTCCAAGTGATGGTGGGCTTTGGCCGCCCACAGACTTTGCACTaGAGTATCACTGTGTCCCCAAGCAAGCAGGTCACATCCACCAAG +
Preference number: 5 (lower is better)
Translates to: PFQVMVGFGRPQTLH*SITVSPSKQVTSTK
Trigger: CTTGGTGGATGTGACCTGCTTGCTTGGGGACACAGTGATACTGCAGTGCAAAGTCTGTGGGCGGCCAAAGCCCACCATCACTTGGAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
ENST00000682290.1
ENST00000682506.1
CDS GCA 90 bp ACTCGAGGAGGCCGGAATCACTTGACGCTGGGCTCGCACACAGCCTaGTCTAAGCAAATGCCTGCCTGGCCTGGATCAAGTTTTTCAGCT +
Preference number: 5 (lower is better)
Translates to: TRGGRNHLTLGSHTA*SKQMPAWPGSSFSA
Trigger: AGCTGAAAAACTTGATCCAGGCCAGGCAGGCATTTGCTTAGAGCAGGCTGTGTGCGAGCCCAGCGTCAAGTGATTCCGGCCTCCTCGAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477496.5
CDS CCA 90 bp AGCGCCTGCTTAGCGCTGCGCTCGAACACCACATATTGCTGGCATTaGTCTAACCGCCGCTTCTTCAAGGTCCAGAAATGCAGCACGCGA +
Preference number: 5 (lower is better)
Translates to: SACLALRSNTTYCWH*SNRRFFKVQKCSTR
Trigger: TCGCGTGCTGCATTTCTGGACCTTGAAGAAGCGGCGGTTAGACCAATGCCAGCAATATGTGGTGTTCGAGCGCAGCGCTAAGCAGGCGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 21 transcripts:
ENST00000240874.7
ENST00000354186.8
ENST00000360013.7
ENST00000393501.5
ENST00000460856.5
ENST00000484224.6
ENST00000682277.1
ENST00000682506.1
ENST00000682540.1
ENST00000682575.1
ENST00000682674.1
ENST00000682695.1
ENST00000683146.1
ENST00000683356.1
ENST00000683592.1
ENST00000683922.1
ENST00000684186.1
ENST00000684276.1
ENST00000684374.1
ENST00000684382.1
ENST00000684410.1
CDS-3UTR CAA 90 bp AAACTCTGTGTTTGGGGTTGGGGCTCTCTCTTGAGTGTGTTGGAAACTGGAGGATGGTGGAGCCGCACCTaGCGGTGCTGCCAGATGCTC +
Preference number: 5 (lower is better)
Translates to: KLCVWGWGSLLSVLETGGWWSRT*RCCQML
Trigger: GAGCATCTGGCAGCACCGCAAGGTGCGGCTCCACCA...TCCTCCAGTTTCCAACACACTCAAGAGAGAGCCCCAACCCCAAACACAGAGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CAA 90 bp GGGGGAAGTACATTGGGCCATTGGGCCTCTCACAGGTCCCTACTGCCCCACCATAGGTCTTCGCCTTCCTaGATGACATTGAGTGTGGCA +
Preference number: 5 (lower is better)
Translates to: GGSTLGHWASHRSLLPHHRSSPS*MTLSVA
Trigger: TGCCACACTCAATGTCATCAAGGAAGGCGAAGACCT...ATGGTGGGGCAGTAGGGACCTGTGAGAGGCCCAATGGCCCAATGTACTTCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CAA 90 bp GGGGGAAGTACATTGGGCCATTGGGCCTCTCACAGGTCCCTACTGCCCCACCATAAGGCCACAGAGGCATaGACCAATTTTAGCCGGTCT +
Preference number: 5 (lower is better)
Translates to: GGSTLGHWASHRSLLPHHKATEA*TNFSRS
Trigger: AGACCGGCTAAAATTGGTCAATGCCTCTGTGGCCTT...ATGGTGGGGCAGTAGGGACCTGTGAGAGGCCCAATGGCCCAATGTACTTCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CAA 90 bp TGGAGAGAAGCTCAGCAACCTCGAATTGCACCCAGTAGAGAAGAAGGGAGCCCCGATGGCTTTCACTTGTaGCTCGGGTCCCCGAGTGTG +
Preference number: 5 (lower is better)
Translates to: WREAQQPRIAPSREEGSPDGFHL*LGSPSV
Trigger: CACACTCGGGGACCCGAGCAACAAGTGAAAGCCATC...GGGGCTCCCTTCTTCTCTACTGGGTGCAATTCGAGGTTGCTGAGCTTCTCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CAA 90 bp CCCCATAACCCAGCCAGGGAAATAAGCCCAACTTCAGGACCTCTCAGAAATCAGTTGGCGTCCCGCAGCTaGACCTCCCGATCCGAAAGG +
Preference number: 5 (lower is better)
Translates to: PHNPAREISPTSGPLRNQLASRS*TSRSER
Trigger: CCTTTCGGATCGGGAGGTCAAGCTGCGGGACGCCAA...CTGATTTCTGAGAGGTCCTGAAGTTGGGCTTATTTCCCTGGCTGGGTTATGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CAA 90 bp GGGGGAAGTACATTGGGCCATTGGGCCTCTCACAGGTCCCTACTGCCCCACCATTTCAGCACTGTTTTATaGTCTGAGGATGGGGTGCGC +
Preference number: 5 (lower is better)
Translates to: GGSTLGHWASHRSLLPHHFSTVL*SEDGVR
Trigger: GCGCACCCCATCCTCAGACAATAAAACAGTGCTGAA...ATGGTGGGGCAGTAGGGACCTGTGAGAGGCCCAATGGCCCAATGTACTTCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS TCA 90 bp GGGCCCGGGCTCGATGTAGGGACTTCCCAACTCCAGTGTGTTTGCTaGGAAAGGCCTCACCATGGTTTTCAATCCAGTCCAACACCTGCT +
Preference number: 5 (lower is better)
Translates to: GPGLDVGTSQLQCVC*ERPHHGFQSSPTPA
Trigger: AGCAGGTGTTGGACTGGATTGAAAACCATGGTGAGGCCTTTCTCAGCAAACACACTGGAGTTGGGAAGTCCCTACATCGAGCCCGGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000240874.7
ENST00000354186.8
ENST00000360013.7
ENST00000439170.2
ENST00000460856.5
ENST00000682506.1
ENST00000683124.1
ENST00000683592.1
ENST00000684186.1
ENST00000684276.1
CDS TCA 90 bp AGATCAGGATGTAGGATGTGGGGGACTCATAGGTGTCATGGAGAGTaGTGTACTGGGGGTGCTGTAGGTGCTGAAGCAGGGCAGCCTCGT +
Preference number: 5 (lower is better)
Translates to: RSGCRMWGTHRCHGE*CTGGAVGAEAGQPR
Trigger: ACGAGGCTGCCCTGCTTCAGCACCTACAGCACCCCCAGTACATCACTCTCCATGACACCTATGAGTCCCCCACATCCTACATCCTGATCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
ENST00000682506.1
CDS TCA 90 bp AGGAGCTTGTCCGCATTGGTGTACGTATTCTGCCAGCAACAACAGTaGGGCAAAGTCAAGTTGCAGTCGCGCCTTCCAGCAGCCCACCCT +
Preference number: 5 (lower is better)
Translates to: RSLSALVYVFCQQQQ*GKVKLQSRLPAAHP
Trigger: AGGGTGGGCTGCTGGAAGGCGCGACTGCAACTTGACTTTGCCTCACTGTTGTTGCTGGCAGAATACGTACACCAATGCGGACAAGCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000484224.6
ENST00000682540.1
ENST00000682674.1
ENST00000682695.1
ENST00000683512.1
ENST00000683827.1
ENST00000684374.1
ENST00000684382.1
ENST00000684410.1
CDS GCA 90 bp TCACACCCTTCTTTTGGCTACCACCTCACTCAGGACCAATGCTGCTaGGGCTTCATAGGCCCTGAAATGGCTCCCTACCCTGCTTGTCCT +
Preference number: 5 (lower is better)
Translates to: SHPSFGYHLTQDQCC*GFIGPEMAPYPACP
Trigger: AGGACAAGCAGGGTAGGGAGCCATTTCAGGGCCTATGAAGCCGCAGCAGCATTGGTCCTGAGTGAGGTGGTAGCCAAAAGAAGGGTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684410.1
CDS CCA 90 bp CTTCCGCCCCATGGAGGTTTCTCCACCATAGTCACACCCTTCTTTTaGCTACCACCTCACTCAGGACCAATGCTGCTGCGGCTTCATAGG +
Preference number: 5 (lower is better)
Translates to: LPPHGGFSTIVTPFF*LPPHSGPMLLRLHR
Trigger: CCTATGAAGCCGCAGCAGCATTGGTCCTGAGTGAGGTGGTAGCCAAAAGAAGGGTGTGACTATGGTGGAGAAACCTCCATGGGGCGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000684410.1
CDS CCA 90 bp TGTAGACAGTTGAGAGCTGGCTGTACTTTCTGCTTCCCGCTATTCTaGCCCATGGTGGGCCCTTCTGGTCCACTCCAGGTGAAGCCACTT +
Preference number: 5 (lower is better)
Translates to: CRQLRAGCTFCFPLF*PMVGPSGPLQVKPL
Trigger: AAGTGGCTTCACCTGGAGTGGACCAGAAGGGCCCACCATGGGCCAGAATAGCGGGAAGCAGAAAGTACAGCCAGCTCTCAACTGTCTACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684410.1
CDS CCA 90 bp GCCCTCACGCCTCTCATAGTGCTAAGCCAGGGAGATTCCATGGGCTaGGAATGGTGGACTCACTCCAGTGTGACTTCAGGAGCAGTTGAT +
Preference number: 5 (lower is better)
Translates to: ALTPLIVLSQGDSMG*EWWTHSSVTSGAVD
Trigger: ATCAACTGCTCCTGAAGTCACACTGGAGTGAGTCCACCATTCCCAGCCCATGGAATCTCCCTGGCTTAGCACTATGAGAGGCGTGAGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683922.1
CDS-3UTR CAA 90 bp GGCAGCAGGAGCCTGGGCGTACCTGCTGTTCTGAGTGGGATCTGGGGGAAGTACGTCTCAAAGATGAATTaGGAGCTGCCAAAGTTGGTC +
Preference number: 5 (lower is better)
Translates to: GSRSLGVPAVLSGIWGKYVSKMN*ELPKLV
Trigger: GACCAACTTTGGCAGCTCCAAATTCATCTTTGAGAC...GTACTTCCCCCAGATCCCACTCAGAACAGCAGGTACGCCCAGGCTCCTGCTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CAA 90 bp TGGAGAGAAGCTCAGCAACCTCGAATTGCACCCAGTAGAGAAGAAGGGAGCCCCCTGCTGTGGGGTGTTTaGTTGTTGGACACAGCCGAG +
Preference number: 5 (lower is better)
Translates to: WREAQQPRIAPSREEGSPLLWGV*LLDTAE
Trigger: CTCGGCTGTGTCCAACAACAAAACACCCCACAGCAG...GGGGCTCCCTTCTTCTCTACTGGGTGCAATTCGAGGTTGCTGAGCTTCTCTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CAA 90 bp GGCAGCAGGAGCCTGGGCGTACCTGCTGTTCTGAGTGGGATCTGGGGGAAGTACTTCCTGTGGATGTACTaGAGAAACACCTCAGCATTC +
Preference number: 5 (lower is better)
Translates to: GSRSLGVPAVLSGIWGKYFLWMY*RNTSAF
Trigger: GAATGCTGAGGTGTTTCTCAAGTACATCCACAGGAA...GTACTTCCCCCAGATCCCACTCAGAACAGCAGGTACGCCCAGGCTCCTGCTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CAA 90 bp GGGGGAAGTACATTGGGCCATTGGGCCTCTCACAGGTCCCTACTGCCCCACCATACATGCATGGCATCATaGGCTTTCTTTGGGACACTG +
Preference number: 5 (lower is better)
Translates to: GGSTLGHWASHRSLLPHHTCMAS*AFFGTL
Trigger: CAGTGTCCCAAAGAAAGCCAATGATGCCATGCATGT...ATGGTGGGGCAGTAGGGACCTGTGAGAGGCCCAATGGCCCAATGTACTTCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CAA 90 bp TGGAGAGAAGCTCAGCAACCTCGAATTGCACCCAGTAGAGAAGAAGGGAGCCCCCACCGAGGAACAAGGTaGCCATCCTTGTCACTGTCC +
Preference number: 5 (lower is better)
Translates to: WREAQQPRIAPSREEGSPHRGTR*PSLSLS
Trigger: GGACAGTGACAAGGATGGCAACCTTGTTCCTCGGTG...GGGGCTCCCTTCTTCTCTACTGGGTGCAATTCGAGGTTGCTGAGCTTCTCTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CAA 90 bp TGGAGAGAAGCTCAGCAACCTCGAATTGCACCCAGTAGAGAAGAAGGGAGCCCCCCAGGCGGGGAGATTTaGCTTGGAACATGTTGCCCT +
Preference number: 5 (lower is better)
Translates to: WREAQQPRIAPSREEGSPPGGEI*LGTCCP
Trigger: AGGGCAACATGTTCCAAGCAAAATCTCCCCGCCTGG...GGGGCTCCCTTCTTCTCTACTGGGTGCAATTCGAGGTTGCTGAGCTTCTCTCCA
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CAA 90 bp AGCAGAAACTCAACTTGTTATAAAAACTCAGAATGGCTCAGCAGGGGGATCTTGTCGCCGCCCTTCATGTaGCCCCGCCGCCCCAGCGCT +
Preference number: 5 (lower is better)
Translates to: SRNSTCYKNSEWLSRGILSPPFM*PRRPSA
Trigger: AGCGCTGGGGCGGCGGGGCAACATGAAGGGCGGCGA...CAAGATCCCCCTGCTGAGCCATTCTGAGTTTTTATAACAAGTTGAGTTTCTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR CAA 90 bp GGCAGGCTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGATGGACGAGGTCCCATaGCAGCCTCCCAGGTCGTTC +
Preference number: 5 (lower is better)
Translates to: GRLSFQNNSELPVNLRGAMDEVP*QPPRSF
Trigger: GAACGACCTGGGAGGCTGCAATGGGACCTCGTCCAT...CGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAGCCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS TCA 90 bp TGTGGCGCTGCAGCCGCTGTTCTGCCAGGGTTAGGTCCTCTGTGTTaGAGTCATTCATCTGCCGAAGCAAGTCTTCATTCCAGGCGTCTA +
Preference number: 5 (lower is better)
Translates to: CGAAAAVLPGLGPLC*SHSSAEASLHSRRL
Trigger: TAGACGCCTGGAATGAAGACTTGCTTCGGCAGATGAATGACTTCAACACAGAGGACCTAACCCTGGCAGAACAGCGGCTGCAGCGCCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 20 transcripts:
ENST00000240874.7
ENST00000354186.8
ENST00000360013.7
ENST00000393501.5
ENST00000460856.5
ENST00000484224.6
ENST00000682277.1
ENST00000682506.1
ENST00000682540.1
ENST00000682575.1
ENST00000682674.1
ENST00000682695.1
ENST00000683146.1
ENST00000683356.1
ENST00000683592.1
ENST00000684186.1
ENST00000684276.1
ENST00000684374.1
ENST00000684382.1
ENST00000684410.1
CDS TCA 90 bp GTTTTGGATTATCTGGGCCAGCGCTCCCCACCATGTGTAGACAGTTaGGAGCTGGCTGTACTTTCTGCTTCCCGCTATTCTGGCCCATGG +
Preference number: 5 (lower is better)
Translates to: VLDYLGQRSPPCVDS*ELAVLSASRYSGPW
Trigger: CCATGGGCCAGAATAGCGGGAAGCAGAAAGTACAGCCAGCTCTCAACTGTCTACACATGGTGGGGAGCGCTGGCCCAGATAATCCAAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000684410.1
CDS GCA 90 bp TGCTCATACAAGGTCTGGTGGTGGTGGATTGCCAGCTCTAGGTCTTaGATCTCGGATGGCAGACCACCTTCACTGCACATCTTGCACCAG +
Preference number: 5 (lower is better)
Translates to: CSYKVWWWWIASSRS*ISDGRPPSLHILHQ
Trigger: CTGGTGCAAGATGTGCAGTGAAGGTGGTCTGCCATCCGAGATGCAAGACCTAGAGCTGGCAATCCACCACCACCAGACCTTGTATGAGCA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000240874.7
ENST00000354186.8
ENST00000360013.7
ENST00000460856.5
ENST00000682506.1
ENST00000683124.1
ENST00000683592.1
ENST00000684186.1
ENST00000684276.1
CDS GCA 90 bp TATTGCTGGCATTGGTCTAACCGCCGCTTCTTCAAGGTCCAGAAATaGAGCACGCGATTCTCCCTCTGCAGGAGCTCACTCAGGATGGCT +
Preference number: 5 (lower is better)
Translates to: YCWHWSNRRFFKVQK*STRFSLCRSSLRMA
Trigger: AGCCATCCTGAGTGAGCTCCTGCAGAGGGAGAATCGCGTGCTGCATTTCTGGACCTTGAAGAAGCGGCGGTTAGACCAATGCCAGCAATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 21 transcripts:
ENST00000240874.7
ENST00000354186.8
ENST00000360013.7
ENST00000393501.5
ENST00000460856.5
ENST00000484224.6
ENST00000682277.1
ENST00000682506.1
ENST00000682540.1
ENST00000682575.1
ENST00000682674.1
ENST00000682695.1
ENST00000683146.1
ENST00000683356.1
ENST00000683592.1
ENST00000683922.1
ENST00000684186.1
ENST00000684276.1
ENST00000684374.1
ENST00000684382.1
ENST00000684410.1
CDS GCA 90 bp ATCCAGTCAAGCGCCTGCTTAGCGCTGCGCTCGAACACCACATATTaGTGGCATTGGTCTAACCGCCGCTTCTTCAAGGTCCAGAAATGC +
Preference number: 5 (lower is better)
Translates to: IQSSACLALRSNTTY*WHWSNRRFFKVQKC
Trigger: GCATTTCTGGACCTTGAAGAAGCGGCGGTTAGACCAATGCCAGCAATATGTGGTGTTCGAGCGCAGCGCTAAGCAGGCGCTTGACTGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 21 transcripts:
ENST00000240874.7
ENST00000354186.8
ENST00000360013.7
ENST00000393501.5
ENST00000460856.5
ENST00000484224.6
ENST00000682277.1
ENST00000682506.1
ENST00000682540.1
ENST00000682575.1
ENST00000682674.1
ENST00000682695.1
ENST00000683146.1
ENST00000683356.1
ENST00000683592.1
ENST00000683922.1
ENST00000684186.1
ENST00000684276.1
ENST00000684374.1
ENST00000684382.1
ENST00000684410.1
CDS GCA 90 bp CAATGTTGGAGGCTTTCAGCACTGTTTTATTGTCTGAGGATGGGGTaGGCCCAGACCACAAGGCGAATTTGCAGGGATCGCCCTCCACGT +
Preference number: 5 (lower is better)
Translates to: QCWRLSALFYCLRMG*AQTTRRICRDRPPR
Trigger: ACGTGGAGGGCGATCCCTGCAAATTCGCCTTGTGGTCTGGGCGCACCCCATCCTCAGACAATAAAACAGTGCTGAAAGCCTCCAACATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 17 transcripts:
ENST00000240874.7
ENST00000354186.8
ENST00000360013.7
ENST00000460856.5
ENST00000682277.1
ENST00000682506.1
ENST00000682540.1
ENST00000682575.1
ENST00000682695.1
ENST00000683146.1
ENST00000683356.1
ENST00000683592.1
ENST00000684276.1
ENST00000684360.1
ENST00000684374.1
ENST00000684382.1
ENST00000684410.1
CDS CCA 90 bp GTGGTTGGCGTCCCGCAGCTTGACCTCCCGATCCGAAAGGCTTGCTaGGATAATATCCAGCTCCAGGTCCTTATTATCCTCTGTGTTGAC +
Preference number: 5 (lower is better)
Translates to: VVGVPQLDLPIRKAC*DNIQLQVLIILCVD
Trigger: GTCAACACAGAGGATAATAAGGACCTGGAGCTGGATATTATCCCAGCAAGCCTTTCGGATCGGGAGGTCAAGCTGCGGGACGCCAACCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 20 transcripts:
ENST00000240874.7
ENST00000354186.8
ENST00000360013.7
ENST00000393501.5
ENST00000460856.5
ENST00000484224.6
ENST00000494648.1
ENST00000682277.1
ENST00000682506.1
ENST00000682540.1
ENST00000682575.1
ENST00000682695.1
ENST00000683146.1
ENST00000683356.1
ENST00000683592.1
ENST00000683922.1
ENST00000684276.1
ENST00000684374.1
ENST00000684382.1
ENST00000684410.1
CDS-3UTR CAA 90 bp CCCCATAACCCAGCCAGGGAAATAAGCCCAACTTCAGGACCTCTCAGAAATCAGGATGGCTTTCACTTGTaGCTCGGGTCCCCGAGTGTG +
Preference number: 5 (lower is better)
Translates to: PHNPAREISPTSGPLRNQDGFHL*LGSPSV
Trigger: CACACTCGGGGACCCGAGCAACAAGTGAAAGCCATC...CTGATTTCTGAGAGGTCCTGAAGTTGGGCTTATTTCCCTGGCTGGGTTATGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CAA 90 bp CCCCATAACCCAGCCAGGGAAATAAGCCCAACTTCAGGACCTCTCAGAAATCAGTCATTGACTTCGTGGTaGGCGTCCCGCAGCTTGACC +
Preference number: 5 (lower is better)
Translates to: PHNPAREISPTSGPLRNQSLTSW*ASRSLT
Trigger: GGTCAAGCTGCGGGACGCCAACCACGAAGTCAATGA...CTGATTTCTGAGAGGTCCTGAAGTTGGGCTTATTTCCCTGGCTGGGTTATGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CAA 90 bp GGCAGGCTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGACCTCCAGGCCATCCTaGAGCTCCCCTTTCCCTTCT +
Preference number: 5 (lower is better)
Translates to: GRLSFQNNSELPVNLRGATSRPS*SSPFPS
Trigger: AGAAGGGAAAGGGGAGCTCAAGGATGGCCTGGAGGT...CGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAGCCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp CCCCATAACCCAGCCAGGGAAATAAGCCCAACTTCAGGACCTCTCAGAAATCAGACCTCCAGGCCATCCTaGAGCTCCCCTTTCCCTTCT +
Preference number: 5 (lower is better)
Translates to: PHNPAREISPTSGPLRNQTSRPS*SSPFPS
Trigger: AGAAGGGAAAGGGGAGCTCAAGGATGGCCTGGAGGT...CTGATTTCTGAGAGGTCCTGAAGTTGGGCTTATTTCCCTGGCTGGGTTATGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CAA 90 bp GGGGGAAGTACATTGGGCCATTGGGCCTCTCACAGGTCCCTACTGCCCCACCATTGCTTGGTTTCAATGTaGGAGGCTTTCAGCACTGTT +
Preference number: 5 (lower is better)
Translates to: GGSTLGHWASHRSLLPHHCLVSM*EAFSTV
Trigger: AACAGTGCTGAAAGCCTCCAACATTGAAACCAAGCA...ATGGTGGGGCAGTAGGGACCTGTGAGAGGCCCAATGGCCCAATGTACTTCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CAA 90 bp TGGAGAGAAGCTCAGCAACCTCGAATTGCACCCAGTAGAGAAGAAGGGAGCCCCACCTCTTCACTCATGTaGCAGACCTCTAGGGCAGCA +
Preference number: 5 (lower is better)
Translates to: WREAQQPRIAPSREEGSPTSSLM*QTSRAA
Trigger: TGCTGCCCTAGAGGTCTGCAACATGAGTGAAGAGGT...GGGGCTCCCTTCTTCTCTACTGGGTGCAATTCGAGGTTGCTGAGCTTCTCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CAA 90 bp TGGAGAGAAGCTCAGCAACCTCGAATTGCACCCAGTAGAGAAGAAGGGAGCCCCTCTCTGCCTCTTGCCTaGGTGTGGGGTTTCCATGAA +
Preference number: 5 (lower is better)
Translates to: WREAQQPRIAPSREEGSPSLPLA*VWGFHE
Trigger: TTCATGGAAACCCCACACCAAGGCAAGAGGCAGAGA...GGGGCTCCCTTCTTCTCTACTGGGTGCAATTCGAGGTTGCTGAGCTTCTCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CAA 90 bp CTGGTGGGAGGTCCCAACGGTGCCACGGCTAACCCGGTGAGCTGCAGGGACAAGATCAGGTTTAATCTATaGAAAATAAAGCAGTGGGCC +
Preference number: 5 (lower is better)
Translates to: LVGGPNGATANPVSCRDKIRFNL*KIKQWA
Trigger: GGCCCACTGCTTTATTTTCAATAGATTAAACCTGAT...CTTGTCCCTGCAGCTCACCGGGTTAGCCGTGGCACCGTTGGGACCTCCCACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CAA 90 bp GGCAGGCTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTGTCTCCCTGAGGGGTaGTTTCATCCCCAGGCTTGG +
Preference number: 5 (lower is better)
Translates to: GRLSFQNNSELPVNLRGACLPEG*FHPQAW
Trigger: CCAAGCCTGGGGATGAAACAACCCCTCAGGGAGACA...CGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAGCCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp GGCAGGCTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGGTCAGCGTTGGCGGCTaGCAGAACAACCCTCTCAGA +
Preference number: 5 (lower is better)
Translates to: GRLSFQNNSELPVNLRGAVSVGG*QNNPLR
Trigger: TCTGAGAGGGTTGTTCTGCAAGCCGCCAACGCTGAC...CGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAGCCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp GGCAGGCTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGCCCAGGTCGTTCTGCTaGCTGGCTTCGAACTTGTCC +
Preference number: 5 (lower is better)
Translates to: GRLSFQNNSELPVNLRGAPRSFC*LASNLS
Trigger: GGACAAGTTCGAAGCCAGCAAGCAGAACGACCTGGG...CGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAGCCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS GCA 90 bp TTCGTGGTTGGCGTCCCGCAGCTTGACCTCCCGATCCGAAAGGCTTaGTGGGATAATATCCAGCTCCAGGTCCTTATTATCCTCTGTGTT +
Preference number: 5 (lower is better)
Translates to: FVVGVPQLDLPIRKA*WDNIQLQVLIILCV
Trigger: AACACAGAGGATAATAAGGACCTGGAGCTGGATATTATCCCAGCAAGCCTTTCGGATCGGGAGGTCAAGCTGCGGGACGCCAACCACGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 20 transcripts:
ENST00000240874.7
ENST00000354186.8
ENST00000360013.7
ENST00000393501.5
ENST00000460856.5
ENST00000484224.6
ENST00000494648.1
ENST00000682277.1
ENST00000682506.1
ENST00000682540.1
ENST00000682575.1
ENST00000682695.1
ENST00000683146.1
ENST00000683356.1
ENST00000683592.1
ENST00000683922.1
ENST00000684276.1
ENST00000684374.1
ENST00000684382.1
ENST00000684410.1
CDS GCA 90 bp ATGCTCCTCCCTTTGGCCTGCAGATACAGATGGCTGCCTTCTTGTTaGCTCCTCACACAGTTGTCCCTCTGTGTCCCATGGTGTCTGATA +
Preference number: 5 (lower is better)
Translates to: MLLPLACRYRWLPSC*LLTQLSLCVPWCLI
Trigger: TATCAGACACCATGGGACACAGAGGGACAACTGTGTGAGGAGGCAACAAGAAGGCAGCCATCTGTATCTGCAGGCCAAAGGGAGGAGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683280.1
CDS-3UTR CAA 90 bp CTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTCATCTGCCCGGGATGCAGTaGCGTCCTGAGAAGCCGTCG +
Preference number: 5 (lower is better)
Translates to: LSFQNNSELPVNLRGAFHLPGMQ*RPEKPS
Trigger: CGACGGCTTCTCAGGACGCAACTGCATCCCGGGCAG...ATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp GCCAGTGTTTGGGAAAGGCTAAAGTTAACCCTCATCTTCTCTACCACACATCATCTGCCCGGGATGCAGTaGCGTCCTGAGAAGCCGTCG +
Preference number: 5 (lower is better)
Translates to: ASVWERLKLTLIFSTTHHLPGMQ*RPEKPS
Trigger: CGACGGCTTCTCAGGACGCAACTGCATCCCGGGCAG...ATGATGTGTGGTAGAGAAGATGAGGGTTAACTTTAGCCTTTCCCAAACACTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CAA 90 bp AAACTCTGTGTTTGGGGTTGGGGCTCTCTCTTGAGTGTGTTGGAAACTGGAGGAAGGAGACTGGTGATCTaGGGCACCAGGCTCTGGAAG +
Preference number: 5 (lower is better)
Translates to: KLCVWGWGSLLSVLETGGRRLVI*GTRLWK
Trigger: CTTCCAGAGCCTGGTGCCCAAGATCACCAGTCTCCT...TCCTCCAGTTTCCAACACACTCAAGAGAGAGCCCCAACCCCAAACACAGAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CAA 90 bp TGGAGAGAAGCTCAGCAACCTCGAATTGCACCCAGTAGAGAAGAAGGGAGCCCCACATCAAGTAGTGCTTaGCCATCCTGGCTGACCTCT +
Preference number: 5 (lower is better)
Translates to: WREAQQPRIAPSREEGSPTSSSA*PSWLTS
Trigger: AGAGGTCAGCCAGGATGGCAAAGCACTACTTGATGT...GGGGCTCCCTTCTTCTCTACTGGGTGCAATTCGAGGTTGCTGAGCTTCTCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CAA 90 bp TACAAAGACAGTCCTTTCCTGAGCCAGGTGCAATTCCAGAGAATGACACTTTGCCCTGCGCACGAAGTCTaGGATGCGCACCTCCAGGTG +
Preference number: 5 (lower is better)
Translates to: YKDSPFLSQVQFQRMTLCPAHEV*DAHLQV
Trigger: CACCTGGAGGTGCGCATCCAAGACTTCGTGCGCAGG...GCAAAGTGTCATTCTCTGGAATTGCACCTGGCTCAGGAAAGGACTGTCTTTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CAA 90 bp GGCAGGCTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGCTGTGGGGTGTTTTGTaGTTGGACACAGCCGAGTCC +
Preference number: 5 (lower is better)
Translates to: GRLSFQNNSELPVNLRGALWGVL*LDTAES
Trigger: GGACTCGGCTGTGTCCAACAACAAAACACCCCACAG...CGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAGCCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp GGCAGGCTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGCTGCTGTGGGGTGTTTaGTTGTTGGACACAGCCGAG +
Preference number: 5 (lower is better)
Translates to: GRLSFQNNSELPVNLRGALLWGV*LLDTAE
Trigger: CTCGGCTGTGTCCAACAACAAAACACCCCACAGCAG...CGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAGCCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp TACAAAGACAGTCCTTTCCTGAGCCAGGTGCAATTCCAGAGAATGACACTTTGCGGACTCGATGGCCAGTaGGAACTGCTCGTGCTCCCG +
Preference number: 5 (lower is better)
Translates to: YKDSPFLSQVQFQRMTLCGLDGQ*ELLVLP
Trigger: CGGGAGCACGAGCAGTTCCAACTGGCCATCGAGTCC...GCAAAGTGTCATTCTCTGGAATTGCACCTGGCTCAGGAAAGGACTGTCTTTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240874.7
CDS-3UTR CAA 90 bp GGCAGGCTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGGCTTCACCTTCTCCTTaGTTTGCTTGGCAGGCACCC +
Preference number: 5 (lower is better)
Translates to: GRLSFQNNSELPVNLRGAASPSP*FAWQAP
Trigger: GGGTGCCTGCCAAGCAAACAAAGGAGAAGGTGAAGC...CGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAGCCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp CTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTCATGTGTTGGTGGAGCGCTaGGGACCCGGGGAACTGTGG +
Preference number: 5 (lower is better)
Translates to: LSFQNNSELPVNLRGAFHVLVER*GPGELW
Trigger: CCACAGTTCCCCGGGTCCCAAGCGCTCCACCAACAC...ATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS TCA 90 bp AGCTGTTATCAGTGTCAAGGATGTTCTGGTCTGGACCCTTCCAAGTaGTGGTGGGCTTTGGCCGCCCACAGACTTTGCACTGCAGTATCA +
Preference number: 5 (lower is better)
Translates to: SCYQCQGCSGLDPSK*WWALAAHRLCTAVS
Trigger: TGATACTGCAGTGCAAAGTCTGTGGGCGGCCAAAGCCCACCATCACTTGGAAGGGTCCAGACCAGAACATCCTTGACACTGATAACAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
ENST00000682290.1
ENST00000682506.1
CDS TCA 90 bp CCTGGTATTGATCTCCCGGCACACCAAGACTATTCCTCACAGAGATaGATACACCTTGGGCTGTATAGCAAGGCTTCCCCAGGGCCATCT +
Preference number: 5 (lower is better)
Translates to: PGIDLPAHQDYSSQR*IHLGLYSKASPGPS
Trigger: AGATGGCCCTGGGGAAGCCTTGCTATACAGCCCAAGGTGTATTCATCTCTGTGAGGAATAGTCTTGGTGTGCCGGGAGATCAATACCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477496.5
CDS TCA 90 bp ATCCACCCAAATTGGCTTGTGAGAATGCTGCAGGGTGGGAGTGGATaGCAGGTGGGGACGCAGCTCCGGAATACCTTACTCACTTTAACA +
Preference number: 5 (lower is better)
Translates to: IHPNWLVRMLQGGSG*QVGTQLRNTLLTLT
Trigger: TGTTAAAGTGAGTAAGGTATTCCGGAGCTGCGTCCCCACCTGTCATCCACTCCCACCCTGCAGCATTCTCACAAGCCAATTTGGGTGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484542.1
CDS GCA 90 bp CTTCCGACCATCGCGAACTTTCTTCTGCTTTTTGATGTTTCCATCTaGCTTCCCGCTGTTAAGCCGACGCACAGGACTCGTCAGCCACTT +
Preference number: 5 (lower is better)
Translates to: LPTIANFLLLFDVSI*LPAVKPTHRTRQPL
Trigger: AAGTGGCTGACGAGTCCTGTGCGTCGGCTTAACAGCGGGAAGGCAGATGGAAACATCAAAAAGCAGAAGAAAGTTCGCGATGGTCGGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
ENST00000393496.5
ENST00000454902.1
ENST00000682290.1
ENST00000682363.1
ENST00000682506.1
ENST00000683592.1
ENST00000684360.1
CDS GCA 90 bp TGGAGAAAGGATCTCCAGGTCCCAGGTGCCACCGAGGAACAAGGTTaGCATCCTGTTAAGAAAAGGGCCGGGCTCTGTGATTTGCATATA +
Preference number: 5 (lower is better)
Translates to: WRKDLQVPGATEEQG*HPVKKRAGLCDLHI
Trigger: TATATGCAAATCACAGAGCCCGGCCCTTTTCTTAACAGGATGGCAACCTTGTTCCTCGGTGGCACCTGGGACCTGGAGATCCTTTCTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000682540.1
ENST00000684374.1
CDS CCA 90 bp TTGGTTCACACTGCACGTCTATGTGAAACCATAGGGGCTGGGAGATaGCTACGTCCCTTGGTTCACCCGGTTGACAATGTAGCTCTTGAC +
Preference number: 5 (lower is better)
Translates to: LVHTARLCETIGAGR*LRPLVHPVDNVALD
Trigger: GTCAAGAGCTACATTGTCAACCGGGTGAACCAAGGGACGTAGCCATCTCCCAGCCCCTATGGTTTCACATAGACGTGCAGTGTGAACCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
ENST00000682506.1
ENST00000684480.1
CDS-3UTR CAA 90 bp AAACTCTGTGTTTGGGGTTGGGGCTCTCTCTTGAGTGTGTTGGAAACTGGAGGAACAGTGAAGCCACGTTaGCACACGTCCTCACTTGGC +
Preference number: 5 (lower is better)
Translates to: KLCVWGWGSLLSVLETGGTVKPR*HTSSLG
Trigger: GCCAAGTGAGGACGTGTGCAAACGTGGCTTCACTGT...TCCTCCAGTTTCCAACACACTCAAGAGAGAGCCCCAACCCCAAACACAGAGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CAA 90 bp TACAAAGACAGTCCTTTCCTGAGCCAGGTGCAATTCCAGAGAATGACACTTTGCAGGTGCACGGCGCTGTaGAAGAACTCCTCCAGGGAG +
Preference number: 5 (lower is better)
Translates to: YKDSPFLSQVQFQRMTLCRCTAL*KNSSRE
Trigger: CTCCCTGGAGGAGTTCTTCAACAGCGCCGTGCACCT...GCAAAGTGTCATTCTCTGGAATTGCACCTGGCTCAGGAAAGGACTGTCTTTGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CAA 90 bp TACAAAGACAGTCCTTTCCTGAGCCAGGTGCAATTCCAGAGAATGACACTTTGCCGGGTGGAGTGCAGCTaGTCCAGGAGACTGGTGATC +
Preference number: 5 (lower is better)
Translates to: YKDSPFLSQVQFQRMTLCRVECS*SRRLVI
Trigger: GATCACCAGTCTCCTGGACAAGCTGCACTCCACCCG...GCAAAGTGTCATTCTCTGGAATTGCACCTGGCTCAGGAAAGGACTGTCTTTGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CAA 90 bp CCCCATAACCCAGCCAGGGAAATAAGCCCAACTTCAGGACCTCTCAGAAATCAGGACCTCTGTGTAGGCTaGGGTCACCTGCTCATACAA +
Preference number: 5 (lower is better)
Translates to: PHNPAREISPTSGPLRNQDLCVG*GHLLIQ
Trigger: TTGTATGAGCAGGTGACCCAAGCCTACACAGAGGTC...CTGATTTCTGAGAGGTCCTGAAGTTGGGCTTATTTCCCTGGCTGGGTTATGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CAA 90 bp CCCCATAACCCAGCCAGGGAAATAAGCCCAACTTCAGGACCTCTCAGAAATCAGAGCATTGACTCTCCATaGCGGATCCATCCCAGAACC +
Preference number: 5 (lower is better)
Translates to: PHNPAREISPTSGPLRNQSIDSP*RIHPRT
Trigger: GGTTCTGGGATGGATCCGCAATGGAGAGTCAATGCT...CTGATTTCTGAGAGGTCCTGAAGTTGGGCTTATTTCCCTGGCTGGGTTATGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CAA 90 bp GGGGGAAGTACATTGGGCCATTGGGCCTCTCACAGGTCCCTACTGCCCCACCATTTTTGTTCCAAATGTTaGCTGATGAGGGGAATGACA +
Preference number: 5 (lower is better)
Translates to: GGSTLGHWASHRSLLPHHFCSKC*LMRGMT
Trigger: TGTCATTCCCCTCATCAGCAAACATTTGGAACAAAA...ATGGTGGGGCAGTAGGGACCTGTGAGAGGCCCAATGGCCCAATGTACTTCCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CAA 90 bp TGGAGAGAAGCTCAGCAACCTCGAATTGCACCCAGTAGAGAAGAAGGGAGCCCCAAATTCACCTGTTTCTaGGATCCAGTCAAGCGCCTG +
Preference number: 5 (lower is better)
Translates to: WREAQQPRIAPSREEGSPKFTCF*DPVKRL
Trigger: CAGGCGCTTGACTGGATCCAAGAAACAGGTGAATTT...GGGGCTCCCTTCTTCTCTACTGGGTGCAATTCGAGGTTGCTGAGCTTCTCTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CAA 90 bp CTGACGAGGTTTAAGAGGTACATCTCTCAATTCAGAGAACTGCACGGAGTGAAATTGGCGTCCCGCAGCTaGACCTCCCGATCCGAAAGG +
Preference number: 5 (lower is better)
Translates to: LTRFKRYISQFRELHGVKLASRS*TSRSER
Trigger: CCTTTCGGATCGGGAGGTCAAGCTGCGGGACGCCAA...TTTCACTCCGTGCAGTTCTCTGAATTGAGAGATGTACCTCTTAAACCTCGTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp CCCCATAACCCAGCCAGGGAAATAAGCCCAACTTCAGGACCTCTCAGAAATCAGTTCCGCTTCTCTTCATaGACTTCGTGGTTGGCGTCC +
Preference number: 5 (lower is better)
Translates to: PHNPAREISPTSGPLRNQFRFSS*TSWLAS
Trigger: GGACGCCAACCACGAAGTCAATGAAGAGAAGCGGAA...CTGATTTCTGAGAGGTCCTGAAGTTGGGCTTATTTCCCTGGCTGGGTTATGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CAA 90 bp GGGGGAAGTACATTGGGCCATTGGGCCTCTCACAGGTCCCTACTGCCCCACCATGAATCTTTGATCTCCTaGCTAAAAACCAAGGAGATC +
Preference number: 5 (lower is better)
Translates to: GGSTLGHWASHRSLLPHHESLIS*LKTKEI
Trigger: GATCTCCTTGGTTTTTAGCAAGGAGATCAAAGATTC...ATGGTGGGGCAGTAGGGACCTGTGAGAGGCCCAATGGCCCAATGTACTTCCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CAA 90 bp CCCCATAACCCAGCCAGGGAAATAAGCCCAACTTCAGGACCTCTCAGAAATCAGACCTCTTCACTCATGTaGCAGACCTCTAGGGCAGCA +
Preference number: 5 (lower is better)
Translates to: PHNPAREISPTSGPLRNQTSSLM*QTSRAA
Trigger: TGCTGCCCTAGAGGTCTGCAACATGAGTGAAGAGGT...CTGATTTCTGAGAGGTCCTGAAGTTGGGCTTATTTCCCTGGCTGGGTTATGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CAA 90 bp GGCAGGCTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTCACCCCAACCTTTCTaGCTCTTCTCATCAGCGCTG +
Preference number: 5 (lower is better)
Translates to: GRLSFQNNSELPVNLRGASPQPF*LFSSAL
Trigger: CAGCGCTGATGAGAAGAGCAAGAAAGGTTGGGGTGA...CGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAGCCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp ATTCAGGTCATCCACAGTGGACAGAACAGAACTTGCCAAGCTGGACTTTATGGACACATGTTCTGCTGGTaGACGGCGAGGACCTGGACC +
Preference number: 5 (lower is better)
Translates to: IQVIHSGQNRTCQAGLYGHMFCW*TARTWT
Trigger: GGTCCAGGTCCTCGCCGTCAACCAGCAGAACATGTG...TCCATAAAGTCCAGCTTGGCAAGTTCTGTTCTGTCCACTGTGGATGACCTGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS TCA 90 bp TACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTaGAACCATAGGGGCTGGGAGATGGCTACGTCCCTTGGTTCACCC +
Preference number: 5 (lower is better)
Translates to: YSHIQSCFGSHCTSM*NHRGWEMATSLGSP
Trigger: GGGTGAACCAAGGGACGTAGCCATCTCCCAGCCCCTATGGTTTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
ENST00000682506.1
ENST00000684480.1
CDS TCA 90 bp CCCTGTTTCACCTGCTCTGTGCAGCTGTCTGCTTCCACCTGGTATTaGTCTCCCGGCACACCAAGACTATTCCTCACAGAGATGAATACA +
Preference number: 5 (lower is better)
Translates to: PCFTCSVQLSASTWY*SPGTPRLFLTEMNT
Trigger: TGTATTCATCTCTGTGAGGAATAGTCTTGGTGTGCCGGGAGATCAATACCAGGTGGAAGCAGACAGCTGCACAGAGCAGGTGAAACAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477496.5
CDS TCA 90 bp TGCCTAGCAGAGAGCAGTACTTACTTTCAGCACTGTTTTATTGTCTaGGGATGGGGTGCGCCCAGACCACAAGGCGAATTTGCAGGGATC +
Preference number: 5 (lower is better)
Translates to: CLAESSTYFQHCFIV*GWGAPRPQGEFAGI
Trigger: GATCCCTGCAAATTCGCCTTGTGGTCTGGGCGCACCCCATCCTCAGACAATAAAACAGTGCTGAAAGTAAGTACTGCTCTCTGCTAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473056.1
CDS GCA 90 bp TCCTTGATGACATTGAGTGTGGCATCTAGAGTGGCGGTCTGCTGCTaGTGGAACTGCTTGATCAGTTCCTGGACTGCATCCACAGAATCT +
Preference number: 5 (lower is better)
Translates to: SLMTLSVASRVAVCC*WNCLISSWTASTES
Trigger: AGATTCTGTGGATGCAGTCCAGGAACTGATCAAGCAGTTCCAGCAGCAGCAGACCGCCACTCTAGATGCCACACTCAATGTCATCAAGGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 26 transcripts:
ENST00000240874.7
ENST00000354186.8
ENST00000360013.7
ENST00000393501.5
ENST00000439170.2
ENST00000460856.5
ENST00000484224.6
ENST00000522553.6
ENST00000682277.1
ENST00000682506.1
ENST00000682540.1
ENST00000682575.1
ENST00000682636.1
ENST00000682674.1
ENST00000682695.1
ENST00000683124.1
ENST00000683146.1
ENST00000683356.1
ENST00000683512.1
ENST00000683592.1
ENST00000683827.1
ENST00000684186.1
ENST00000684276.1
ENST00000684374.1
ENST00000684382.1
ENST00000684410.1
CDS CCA 90 bp CAGAGACTTTGTTGCCCAGAATATCCTTGGGTTTACGAGGCCCTGTaGCTTCATTTTTACCCGTGTTCTCCACTTCCGCCCGCTTTCTCA +
Preference number: 5 (lower is better)
Translates to: QRLCCPEYPWVYEAL*LHFYPCSPLPPAFS
Trigger: TGAGAAAGCGGGCGGAAGTGGAGAACACGGGTAAAAATGAAGCCACAGGGCCTCGTAAACCCAAGGATATTCTGGGCAACAAAGTCTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
ENST00000462213.2
ENST00000484542.1
ENST00000682290.1
ENST00000682506.1
CDS-3UTR CAA 90 bp TGGAGAGAAGCTCAGCAACCTCGAATTGCACCCAGTAGAGAAGAAGGGAGCCCCGTCTCAAAGATGAATTaGGAGCTGCCAAAGTTGGTC +
Preference number: 5 (lower is better)
Translates to: WREAQQPRIAPSREEGSPVSKMN*ELPKLV
Trigger: GACCAACTTTGGCAGCTCCAAATTCATCTTTGAGAC...GGGGCTCCCTTCTTCTCTACTGGGTGCAATTCGAGGTTGCTGAGCTTCTCTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CAA 90 bp CTGACGAGGTTTAAGAGGTACATCTCTCAATTCAGAGAACTGCACGGAGTGAAAAGGTGCACGGCGCTGTaGAAGAACTCCTCCAGGGAG +
Preference number: 5 (lower is better)
Translates to: LTRFKRYISQFRELHGVKRCTAL*KNSSRE
Trigger: CTCCCTGGAGGAGTTCTTCAACAGCGCCGTGCACCT...TTTCACTCCGTGCAGTTCTCTGAATTGAGAGATGTACCTCTTAAACCTCGTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp AAACTCTGTGTTTGGGGTTGGGGCTCTCTCTTGAGTGTGTTGGAAACTGGAGGACCAACTCCAGTGTGTTaGCTGAGAAAGGCCTCACCA +
Preference number: 5 (lower is better)
Translates to: KLCVWGWGSLLSVLETGGPTPVC*LRKASP
Trigger: TGGTGAGGCCTTTCTCAGCAAACACACTGGAGTTGG...TCCTCCAGTTTCCAACACACTCAAGAGAGAGCCCCAACCCCAAACACAGAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CAA 90 bp GGCAGGCTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGAGGTCTTCGCCTTCCTaGATGACATTGAGTGTGGCA +
Preference number: 5 (lower is better)
Translates to: GRLSFQNNSELPVNLRGARSSPS*MTLSVA
Trigger: TGCCACACTCAATGTCATCAAGGAAGGCGAAGACCT...CGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAGCCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp AAACTCTGTGTTTGGGGTTGGGGCTCTCTCTTGAGTGTGTTGGAAACTGGAGGATTGACCAGGCTGGCGTaGAGCATTGACTCTCCATTG +
Preference number: 5 (lower is better)
Translates to: KLCVWGWGSLLSVLETGGLTRLA*SIDSPL
Trigger: CAATGGAGAGTCAATGCTCAACGCCAGCCTGGTCAA...TCCTCCAGTTTCCAACACACTCAAGAGAGAGCCCCAACCCCAAACACAGAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CAA 90 bp TACAAAGACAGTCCTTTCCTGAGCCAGGTGCAATTCCAGAGAATGACACTTTGCGACAAAGAGCTGGCATaGACCAGGCTGGCGTTGAGC +
Preference number: 5 (lower is better)
Translates to: YKDSPFLSQVQFQRMTLCDKELA*TRLALS
Trigger: GCTCAACGCCAGCCTGGTCAATGCCAGCTCTTTGTC...GCAAAGTGTCATTCTCTGGAATTGCACCTGGCTCAGGAAAGGACTGTCTTTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CAA 90 bp TGGAGAGAAGCTCAGCAACCTCGAATTGCACCCAGTAGAGAAGAAGGGAGCCCCTTCCTGTGGATGTACTaGAGAAACACCTCAGCATTC +
Preference number: 5 (lower is better)
Translates to: WREAQQPRIAPSREEGSPFLWMY*RNTSAF
Trigger: GAATGCTGAGGTGTTTCTCAAGTACATCCACAGGAA...GGGGCTCCCTTCTTCTCTACTGGGTGCAATTCGAGGTTGCTGAGCTTCTCTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CAA 90 bp TGGAGAGAAGCTCAGCAACCTCGAATTGCACCCAGTAGAGAAGAAGGGAGCCCCTTATTATCCTCTGTGTaGACTCCTAGGGCTTTCTCC +
Preference number: 5 (lower is better)
Translates to: WREAQQPRIAPSREEGSPLLSSV*TPRAFS
Trigger: GGAGAAAGCCCTAGGAGTCAACACAGAGGATAATAA...GGGGCTCCCTTCTTCTCTACTGGGTGCAATTCGAGGTTGCTGAGCTTCTCTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CAA 90 bp TACAAAGACAGTCCTTTCCTGAGCCAGGTGCAATTCCAGAGAATGACACTTTGCACCTCCAGGCCATCCTaGAGCTCCCCTTTCCCTTCT +
Preference number: 5 (lower is better)
Translates to: YKDSPFLSQVQFQRMTLCTSRPS*SSPFPS
Trigger: AGAAGGGAAAGGGGAGCTCAAGGATGGCCTGGAGGT...GCAAAGTGTCATTCTCTGGAATTGCACCTGGCTCAGGAAAGGACTGTCTTTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CAA 90 bp CTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTCATGACCACAAGGCGAATTaGCAGGGATCGCCCTCCACG +
Preference number: 5 (lower is better)
Translates to: LSFQNNSELPVNLRGAFHDHKAN*QGSPST
Trigger: CGTGGAGGGCGATCCCTGCAAATTCGCCTTGTGGTC...ATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp CCCCATAACCCAGCCAGGGAAATAAGCCCAACTTCAGGACCTCTCAGAAATCAGTTTGCTTGGAACATGTaGCCCTCTGAGCAAAGGCTG +
Preference number: 5 (lower is better)
Translates to: PHNPAREISPTSGPLRNQFAWNM*PSEQRL
Trigger: CAGCCTTTGCTCAGAGGGCAACATGTTCCAAGCAAA...CTGATTTCTGAGAGGTCCTGAAGTTGGGCTTATTTCCCTGGCTGGGTTATGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CAA 90 bp CCCAGGATCATCATCATCTGGGATTCCTTGTTATTTCCAACTTGCTGTGGAGAAGCCACGGACTCGGACTaGCCTCCATTCTCGCTTGAG +
Preference number: 5 (lower is better)
Translates to: PRIIIIWDSLLFPTCCGEATDSD*PPFSLE
Trigger: CTCAAGCGAGAATGGAGGCAAGTCCGAGTCCGTGGC...TTCTCCACAGCAAGTTGGAAATAACAAGGAATCCCAGATGATGATGATCCTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR CAA 90 bp CTGACGAGGTTTAAGAGGTACATCTCTCAATTCAGAGAACTGCACGGAGTGAAAGCCACGGACTCGGACTaGCCTCCATTCTCGCTTGAG +
Preference number: 5 (lower is better)
Translates to: LTRFKRYISQFRELHGVKATDSD*PPFSLE
Trigger: CTCAAGCGAGAATGGAGGCAAGTCCGAGTCCGTGGC...TTTCACTCCGTGCAGTTCTCTGAATTGAGAGATGTACCTCTTAAACCTCGTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp TATACACCAGAAAGCAGCATTGGCCTCAAAGTACAATTAGTCCTTTTAGTTCAGGGCTGGGCCTGCAGGTaGGCCACGGACTCGGACTTG +
Preference number: 5 (lower is better)
Translates to: YTPESSIGLKVQLVLLVQGWACR*ATDSDL
Trigger: CAAGTCCGAGTCCGTGGCCAACCTGCAGGCCCAGCC...CTGAACTAAAAGGACTAATTGTACTTTGAGGCCAATGCTGCTTTCTGGTGTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp TATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAAGGCTGGGCCTGCAGGTaGGCCACGGACTCGGACTTG +
Preference number: 5 (lower is better)
Translates to: YLQSHSVLLWFTLHVYVKGWACR*ATDSDL
Trigger: CAAGTCCGAGTCCGTGGCCAACCTGCAGGCCCAGCC...TTTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp ATGTGCGATGGTCCCTATGGGGAAACCTGTCCACTTATGAATAAGGCCCTTTGTCACTTCTTAAGAGTGTaGGTGGAGCGCTTGGGACCC +
Preference number: 5 (lower is better)
Translates to: MCDGPYGETCPLMNKALCHFLRV*VERLGP
Trigger: GGGTCCCAAGCGCTCCACCAACACTCTTAAGAAGTG...ACAAAGGGCCTTATTCATAAGTGGACAGGTTTCCCCATAGGGACCATCGCACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR CAA 90 bp CTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTCATAACACGCGCCTCTCTTaGGTCCGGGACTGCATGCCT +
Preference number: 5 (lower is better)
Translates to: LSFQNNSELPVNLRGAFHNTRLS*VRDCMP
Trigger: AGGCATGCAGTCCCGGACCAAAGAGAGGCGCGTGTT...ATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp AGCAGAAACTCAACTTGTTATAAAAACTCAGAATGGCTCAGCAGGGGGATCTTGTCTGCTGCTGTGGCTTaGGTGAGGGGCGCCAGGATG +
Preference number: 5 (lower is better)
Translates to: SRNSTCYKNSEWLSRGILSAAVA*VRGARM
Trigger: CATCCTGGCGCCCCTCACCAAAGCCACAGCAGCAGA...CAAGATCCCCCTGCTGAGCCATTCTGAGTTTTTATAACAAGTTGAGTTTCTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR CAA 90 bp GCTCCCTCATATTCTCACAAATCTAAATTGCCATGCTCTTCCACAGAGGCAAGAGGAGACGGGGATGCCTaGAATGACTTCTGGGGCAGC +
Preference number: 5 (lower is better)
Translates to: APSYSHKSKLPCSSTEARGDGDA*NDFWGS
Trigger: GCTGCCCCAGAAGTCATTCAAGGCATCCCCGTCTCC...TCTTGCCTCTGTGGAAGAGCATGGCAATTTAGATTTGTGAGAATATGAGGGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR CAA 90 bp CTGACGAGGTTTAAGAGGTACATCTCTCAATTCAGAGAACTGCACGGAGTGAAAGTGGTCTGCACACCATaGTTCTGGGCCCTGGCCTTC +
Preference number: 5 (lower is better)
Translates to: LTRFKRYISQFRELHGVKVVCTP*FWALAF
Trigger: GAAGGCCAGGGCCCAGAACAATGGTGTGCAGACCAC...TTTCACTCCGTGCAGTTCTCTGAATTGAGAGATGTACCTCTTAAACCTCGTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS TCA 90 bp CAGTTCCTGAGTCTCCTCTGTGGTCTCTCCAGTGGAGGTATGTGTTaGGAGGTAAAATTCACCTGTTTCTTGGATCCAGTCAAGCGCCTG +
Preference number: 5 (lower is better)
Translates to: QFLSLLCGLSSGGMC*EVKFTCFLDPVKRL
Trigger: CAGGCGCTTGACTGGATCCAAGAAACAGGTGAATTTTACCTCTCAACACATACCTCCACTGGAGAGACCACAGAGGAGACTCAGGAACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 21 transcripts:
ENST00000240874.7
ENST00000354186.8
ENST00000360013.7
ENST00000393501.5
ENST00000460856.5
ENST00000484224.6
ENST00000682277.1
ENST00000682506.1
ENST00000682540.1
ENST00000682575.1
ENST00000682674.1
ENST00000682695.1
ENST00000683146.1
ENST00000683356.1
ENST00000683592.1
ENST00000683922.1
ENST00000684186.1
ENST00000684276.1
ENST00000684374.1
ENST00000684382.1
ENST00000684410.1
CDS TCA 90 bp GTTAGGGGCTGCTGGAACACCTTGCACTTTGACTGTTGCAGACGTTaGTGTGGTCCCGTGGTCATTTGTTGCTATGCAGGTATAAATCCC +
Preference number: 5 (lower is better)
Translates to: VRGCWNTLHFDCCRR*CGPVVICCYAGINP
Trigger: GGGATTTATACCTGCATAGCAACAAATGACCACGGGACCACATCAACGTCTGCAACAGTCAAAGTGCAAGGTGTTCCAGCAGCCCCTAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
ENST00000682290.1
ENST00000682506.1
CDS TCA 90 bp GCTCCAGGGTTCTCAAATCCCCAATATTCCAAGTGCCAAGTAGCCTaGGTTCCCGAAGTCTTCACTATGCCAGGATCAAGCCTTGATGGA +
Preference number: 5 (lower is better)
Translates to: APGFSNPQYSKCQVA*VPEVFTMPGSSLDG
Trigger: TCCATCAAGGCTTGATCCTGGCATAGTGAAGACTTCGGGAACTCAGGCTACTTGGCACTTGGAATATTGGGGATTTGAGAACCCTGGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684441.1
CDS GCA 90 bp CTGGACCACCTCACCTTGGCTCACACAGATTTCATTCTCCTTCAGTaGATAGTAATCTTTGATCACGGCCATGGACGAGGTCCCATTGCA +
Preference number: 5 (lower is better)
Translates to: LDHLTLAHTDFILLQ*IVIFDHGHGRGPIA
Trigger: TGCAATGGGACCTCGTCCATGGCCGTGATCAAAGATTACTATGCACTGAAGGAGAATGAAATCTGTGTGAGCCAAGGTGAGGTGGTCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
ENST00000393496.5
ENST00000459915.2
ENST00000682290.1
ENST00000682363.1
ENST00000682506.1
ENST00000683592.1
ENST00000684360.1
CDS GCA 90 bp ATTTCAGCAGTAGGGAGAGAATATGATAGGAGAGGTTGTAGGCATTaGTGTCTTGCAGGGCTAGAACACAGGGGAAGAGGCTGGGGATCA +
Preference number: 5 (lower is better)
Translates to: ISAVGREYDRRGCRH*CLAGLEHRGRGWGS
Trigger: TGATCCCCAGCCTCTTCCCCTGTGTTCTAGCCCTGCAAGACAGCAATGCCTACAACCTCTCCTATCATATTCTCTCCCTACTGCTGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683280.1
CDS-3UTR CAA 90 bp GCCAGTGTTTGGGAAAGGCTAAAGTTAACCCTCATCTTCTCTACCACACATCATTGCACACGTCCTCACTaGGCACGCTGGCCAAATACG +
Preference number: 5 (lower is better)
Translates to: ASVWERLKLTLIFSTTHHCTRPH*ARWPNT
Trigger: CGTATTTGGCCAGCGTGCCAAGTGAGGACGTGTGCA...ATGATGTGTGGTAGAGAAGATGAGGGTTAACTTTAGCCTTTCCCAAACACTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CAA 90 bp CATTTTAGACTTTGGAGAGAAGCTCAGCAACCTCGAATTGCACCCAGTAGAGAATTGATGAGGTCCCACTaGGAGCCCCGCATGTCGATG +
Preference number: 5 (lower is better)
Translates to: HFRLWREAQQPRIAPSRELMRSH*EPRMSM
Trigger: CATCGACATGCGGGGCTCCAAGTGGGACCTCATCAA...TTCTCTACTGGGTGCAATTCGAGGTTGCTGAGCTTCTCTCCAAAGTCTAAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CAA 90 bp CTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTCATAGGAGACTGGTGATCTaGGGCACCAGGCTCTGGAAG +
Preference number: 5 (lower is better)
Translates to: LSFQNNSELPVNLRGAFHRRLVI*GTRLWK
Trigger: CTTCCAGAGCCTGGTGCCCAAGATCACCAGTCTCCT...ATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp CTGACGAGGTTTAAGAGGTACATCTCTCAATTCAGAGAACTGCACGGAGTGAAAAGGAGACTGGTGATCTaGGGCACCAGGCTCTGGAAG +
Preference number: 5 (lower is better)
Translates to: LTRFKRYISQFRELHGVKRRLVI*GTRLWK
Trigger: CTTCCAGAGCCTGGTGCCCAAGATCACCAGTCTCCT...TTTCACTCCGTGCAGTTCTCTGAATTGAGAGATGTACCTCTTAAACCTCGTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp CATTTTAGACTTTGGAGAGAAGCTCAGCAACCTCGAATTGCACCCAGTAGAGAACCTTCACTGCACATCTaGCACCAGGCATCCACTCCC +
Preference number: 5 (lower is better)
Translates to: HFRLWREAQQPRIAPSREPSLHI*HQASTP
Trigger: GGGAGTGGATGCCTGGTGCAAGATGTGCAGTGAAGG...TTCTCTACTGGGTGCAATTCGAGGTTGCTGAGCTTCTCTCCAAAGTCTAAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CAA 90 bp TATACACCAGAAAGCAGCATTGGCCTCAAAGTACAATTAGTCCTTTTAGTTCAGTGGTGGAGCCGCACCTaGCGGTGCTGCCAGATGCTC +
Preference number: 5 (lower is better)
Translates to: YTPESSIGLKVQLVLLVQWWSRT*RCCQML
Trigger: GAGCATCTGGCAGCACCGCAAGGTGCGGCTCCACCA...CTGAACTAAAAGGACTAATTGTACTTTGAGGCCAATGCTGCTTTCTGGTGTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp GATAAAGAAACCGAAGCTCACACAAGACCACAAAGCAAGATTTTGCTGAGTCAACCTGCGCACGAAGTCTaGGATGCGCACCTCCAGGTG +
Preference number: 5 (lower is better)
Translates to: DKETEAHTRPQSKILLSQPAHEV*DAHLQV
Trigger: CACCTGGAGGTGCGCATCCAAGACTTCGTGCGCAGG...TTGACTCAGCAAAATCTTGCTTTGTGGTCTTGTGTGAGCTTCGGTTTCTTTATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439170.2
CDS-3UTR CAA 90 bp GGCAGGCTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGCATGTCCACAACTCTTaGGTGTGTGTGTGGAAGGAA +
Preference number: 5 (lower is better)
Translates to: GRLSFQNNSELPVNLRGAHVHNS*VCVWKE
Trigger: TTCCTTCCACACACACACCAAAGAGTTGTGGACATG...CGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAGCCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp CTGACGAGGTTTAAGAGGTACATCTCTCAATTCAGAGAACTGCACGGAGTGAAAGATGGCTTTCACTTGTaGCTCGGGTCCCCGAGTGTG +
Preference number: 5 (lower is better)
Translates to: LTRFKRYISQFRELHGVKDGFHL*LGSPSV
Trigger: CACACTCGGGGACCCGAGCAACAAGTGAAAGCCATC...TTTCACTCCGTGCAGTTCTCTGAATTGAGAGATGTACCTCTTAAACCTCGTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp CATTTTAGACTTTGGAGAGAAGCTCAGCAACCTCGAATTGCACCCAGTAGAGAACAGGATGGCTTTCACTaGTTGCTCGGGTCCCCGAGT +
Preference number: 5 (lower is better)
Translates to: HFRLWREAQQPRIAPSREQDGFH*LLGSPS
Trigger: ACTCGGGGACCCGAGCAACAAGTGAAAGCCATCCTG...TTCTCTACTGGGTGCAATTCGAGGTTGCTGAGCTTCTCTCCAAAGTCTAAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CAA 90 bp AAACTCTGTGTTTGGGGTTGGGGCTCTCTCTTGAGTGTGTTGGAAACTGGAGGATTCTCCTTTGTTTGCTaGGCAGGCACCCTGAATTCC +
Preference number: 5 (lower is better)
Translates to: KLCVWGWGSLLSVLETGGFSFVC*AGTLNS
Trigger: GGAATTCAGGGTGCCTGCCAAGCAAACAAAGGAGAA...TCCTCCAGTTTCCAACACACTCAAGAGAGAGCCCCAACCCCAAACACAGAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CAA 90 bp CTGACGAGGTTTAAGAGGTACATCTCTCAATTCAGAGAACTGCACGGAGTGAAATCATTGACTTCGTGGTaGGCGTCCCGCAGCTTGACC +
Preference number: 5 (lower is better)
Translates to: LTRFKRYISQFRELHGVKSLTSW*ASRSLT
Trigger: GGTCAAGCTGCGGGACGCCAACCACGAAGTCAATGA...TTTCACTCCGTGCAGTTCTCTGAATTGAGAGATGTACCTCTTAAACCTCGTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp TGGAGAGAAGCTCAGCAACCTCGAATTGCACCCAGTAGAGAAGAAGGGAGCCCCTTCCTTCAGGAGCAGTaGATATTTGGTGATCCTTTG +
Preference number: 5 (lower is better)
Translates to: WREAQQPRIAPSREEGSPFLQEQ*IFGDPL
Trigger: CAAAGGATCACCAAATATCAACTGCTCCTGAAGGAA...GGGGCTCCCTTCTTCTCTACTGGGTGCAATTCGAGGTTGCTGAGCTTCTCTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CAA 90 bp AAACTCTGTGTTTGGGGTTGGGGCTCTCTCTTGAGTGTGTTGGAAACTGGAGGATTCAGCACTGTTTTATaGTCTGAGGATGGGGTGCGC +
Preference number: 5 (lower is better)
Translates to: KLCVWGWGSLLSVLETGGFSTVL*SEDGVR
Trigger: GCGCACCCCATCCTCAGACAATAAAACAGTGCTGAA...TCCTCCAGTTTCCAACACACTCAAGAGAGAGCCCCAACCCCAAACACAGAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CAA 90 bp CATTTTAGACTTTGGAGAGAAGCTCAGCAACCTCGAATTGCACCCAGTAGAGAATCTGGGGGAAGTACATaGGGCCATTGGGCCTCTCAC +
Preference number: 5 (lower is better)
Translates to: HFRLWREAQQPRIAPSRESGGST*GHWASH
Trigger: GTGAGAGGCCCAATGGCCCAATGTACTTCCCCCAGA...TTCTCTACTGGGTGCAATTCGAGGTTGCTGAGCTTCTCTCCAAAGTCTAAAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CAA 90 bp TACAAAGACAGTCCTTTCCTGAGCCAGGTGCAATTCCAGAGAATGACACTTTGCCATCATCTCTGCCTCTaGCCTTGGTGTGGGGTTTCC +
Preference number: 5 (lower is better)
Translates to: YKDSPFLSQVQFQRMTLCHHLCL*PWCGVS
Trigger: GGAAACCCCACACCAAGGCAAGAGGCAGAGATGATG...GCAAAGTGTCATTCTCTGGAATTGCACCTGGCTCAGGAAAGGACTGTCTTTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CAA 90 bp TATACACCAGAAAGCAGCATTGGCCTCAAAGTACAATTAGTCCTTTTAGTTCAGGTGTTGGTGGAGCGCTaGGGACCCGGGGAACTGTGG +
Preference number: 5 (lower is better)
Translates to: YTPESSIGLKVQLVLLVQVLVER*GPGELW
Trigger: CCACAGTTCCCCGGGTCCCAAGCGCTCCACCAACAC...CTGAACTAAAAGGACTAATTGTACTTTGAGGCCAATGCTGCTTTCTGGTGTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp TATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAAGTGTTGGTGGAGCGCTaGGGACCCGGGGAACTGTGG +
Preference number: 5 (lower is better)
Translates to: YLQSHSVLLWFTLHVYVKVLVER*GPGELW
Trigger: CCACAGTTCCCCGGGTCCCAAGCGCTCCACCAACAC...TTTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp ATGTGCGATGGTCCCTATGGGGAAACCTGTCCACTTATGAATAAGGCCCTTTGTTCACCCCAACCTTTCTaGCTCTTCTCATCAGCGCTG +
Preference number: 5 (lower is better)
Translates to: MCDGPYGETCPLMNKALCSPQPF*LFSSAL
Trigger: CAGCGCTGATGAGAAGAGCAAGAAAGGTTGGGGTGA...ACAAAGGGCCTTATTCATAAGTGGACAGGTTTCCCCATAGGGACCATCGCACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR CAA 90 bp CCCAGGATCATCATCATCTGGGATTCCTTGTTATTTCCAACTTGCTGTGGAGAATGCTGGATGTCAGCGTaGGCGGCTTGCAGAACAACC +
Preference number: 5 (lower is better)
Translates to: PRIIIIWDSLLFPTCCGECWMSA*AACRTT
Trigger: GGTTGTTCTGCAAGCCGCCAACGCTGACATCCAGCA...TTCTCCACAGCAAGTTGGAAATAACAAGGAATCCCAGATGATGATGATCCTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR CAA 90 bp CTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTCATTGCTGGATGTCAGCGTaGGCGGCTTGCAGAACAACC +
Preference number: 5 (lower is better)
Translates to: LSFQNNSELPVNLRGAFHCWMSA*AACRTT
Trigger: GGTTGTTCTGCAAGCCGCCAACGCTGACATCCAGCA...ATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp CCCAGGATCATCATCATCTGGGATTCCTTGTTATTTCCAACTTGCTGTGGAGAAGGGAAGCCTGGCAGGTaGAGACCTCATCACAGCTGT +
Preference number: 5 (lower is better)
Translates to: PRIIIIWDSLLFPTCCGEGKPGR*RPHHSC
Trigger: ACAGCTGTGATGAGGTCTCAACCTGCCAGGCTTCCC...TTCTCCACAGCAAGTTGGAAATAACAAGGAATCCCAGATGATGATGATCCTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR CAA 90 bp CTGACGAGGTTTAAGAGGTACATCTCTCAATTCAGAGAACTGCACGGAGTGAAAGGGAAGCCTGGCAGGTaGAGACCTCATCACAGCTGT +
Preference number: 5 (lower is better)
Translates to: LTRFKRYISQFRELHGVKGKPGR*RPHHSC
Trigger: ACAGCTGTGATGAGGTCTCAACCTGCCAGGCTTCCC...TTTCACTCCGTGCAGTTCTCTGAATTGAGAGATGTACCTCTTAAACCTCGTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp GTAAAAGCTGATATGAAAGCTTGGGGTCTGTCTAACATTCTGTCAACTGCCCCCTTGCTGGCTTCGAACTaGTCCCCAGGCTGGTGGTAT +
Preference number: 5 (lower is better)
Translates to: VKADMKAWGLSNILSTAPLLASN*SPGWWY
Trigger: ATACCACCAGCCTGGGGACAAGTTCGAAGCCAGCAA...GGGGGCAGTTGACAGAATGTTAGACAGACCCCAAGCTTTCATATCAGCTTTTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR CAA 90 bp CTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTCATCCCAGGTCGTTCTGCTaGCTGGCTTCGAACTTGTCC +
Preference number: 5 (lower is better)
Translates to: LSFQNNSELPVNLRGAFHPRSFC*LASNLS
Trigger: GGACAAGTTCGAAGCCAGCAAGCAGAACGACCTGGG...ATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp TCAGGTATTGATGGAAACTCATATGATGGCCATCCCTGGGCCAACAAATTAGCTGGCCGCCCACAGACTTaGCACTGCAGTATCACTGTG +
Preference number: 5 (lower is better)
Translates to: SGIDGNSYDGHPWANKLAGRPQT*HCSITV
Trigger: CACAGTGATACTGCAGTGCAAAGTCTGTGGGCGGCC...AGCTAATTTGTTGGCCCAGGGATGGCCATCATATGAGTTTCCATCAATACCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR CAA 90 bp ATGTGCGATGGTCCCTATGGGGAAACCTGTCCACTTATGAATAAGGCCCTTTGTGGCTGCTGGAACACCTaGCACTTTGACTGTTGCAGA +
Preference number: 5 (lower is better)
Translates to: MCDGPYGETCPLMNKALCGCWNT*HFDCCR
Trigger: TCTGCAACAGTCAAAGTGCAAGGTGTTCCAGCAGCC...ACAAAGGGCCTTATTCATAAGTGGACAGGTTTCCCCATAGGGACCATCGCACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS TCA 90 bp TCCAGAGGTGACACTATGCCACATTTCTTGTTCTTCCCATGGGGCTaGGTCACTGAGCTTTTTCTGGGTTTCTGGGAGGTTCAGACACAT +
Preference number: 5 (lower is better)
Translates to: SRGDTMPHFLFFPWG*VTELFLGFWEVQTH
Trigger: ATGTGTCTGAACCTCCCAGAAACCCAGAAAAAGCTCAGTGACTCAGCCCCATGGGAAGAACAAGAAATGTGGCATAGTGTCACCTCTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000682674.1
ENST00000684186.1
CDS TCA 90 bp ATGGTCCCCACTGGGAGTATTCTGAAATGGTTTCTTATACATAGGTaGTTGTGGTGGCACCACATGACCTGCCAAATGCCTGGTCACAGC +
Preference number: 5 (lower is better)
Translates to: MVPTGSILKWFLIHR*LWWHHMTCQMPGHS
Trigger: GCTGTGACCAGGCATTTGGCAGGTCATGTGGTGCCACCACAATCACCTATGTATAAGAAACCATTTCAGAATACTCCCAGTGGGGACCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682674.1
CDS TCA 90 bp GAAGAGGATATAGAGGAAACAGTGTGTGTAAGACTTTCCTTGGTCTaGCGGTTCAGAAGAAGCCCACCAGGTCCACAATCCAGAGGAGGA +
Preference number: 5 (lower is better)
Translates to: EEDIEETVCVRLSLV*RFRRSPPGPQSRGG
Trigger: TCCTCCTCTGGATTGTGGACCTGGTGGGCTTCTTCTGAACCGTCAGACCAAGGAAAGTCTTACACACACTGTTTCCTCTATATCCTCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684374.1
CDS TCA 90 bp AGTAGCCTGAGTTCCCGAAGTCTTCACTATGCCAGGATCAAGCCTTaGTGGAAGCTAAGTCCATCTTCCCCACTGTGTTCACAAGATCAG +
Preference number: 5 (lower is better)
Translates to: SSLSSRSLHYARIKP*WKLSPSSPLCSQDQ
Trigger: CTGATCTTGTGAACACAGTGGGGAAGATGGACTTAGCTTCCATCAAGGCTTGATCCTGGCATAGTGAAGACTTCGGGAACTCAGGCTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684441.1
CDS GCA 90 bp ATTGGAAGCTTCCTGAGACCTCACCAGAAGCAGATGCTAGCACTGTaGTTCCTATACAGCCTGCAGAACCATGAGCCAATTAAACCTCCT +
Preference number: 5 (lower is better)
Translates to: IGSFLRPHQKQMLAL*FLYSLQNHEPIKPP
Trigger: AGGAGGTTTAATTGGCTCATGGTTCTGCAGGCTGTATAGGAAGCACAGTGCTAGCATCTGCTTCTGGTGAGGTCTCAGGAAGCTTCCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683280.1
CDS-3UTR CAA 90 bp TTATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAGGAGGCCGGAATCACTaGACGCTGGGCTCGCACACA +
Preference number: 5 (lower is better)
Translates to: LFTVTFSLALVHTARLCEGGRNH*TLGSHT
Trigger: TGTGTGCGAGCCCAGCGTCAAGTGATTCCGGCCTCC...TTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360013.7
CDS-3UTR CAA 90 bp CAGCAATTCTCAGTCATGCAAATGCCCGTGTTAAAGTTCTCCATTGGATTTAAAGGAGGCCGGAATCACTaGACGCTGGGCTCGCACACA +
Preference number: 5 (lower is better)
Translates to: QQFSVMQMPVLKFSIGFKGGRNH*TLGSHT
Trigger: TGTGTGCGAGCCCAGCGTCAAGTGATTCCGGCCTCC...TTTAAATCCAATGGAGAACTTTAACACGGGCATTTGCATGACTGAGAATTGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CAA 90 bp CATTTTAGACTTTGGAGAGAAGCTCAGCAACCTCGAATTGCACCCAGTAGAGAAACAGTGAAGCCACGTTaGCACACGTCCTCACTTGGC +
Preference number: 5 (lower is better)
Translates to: HFRLWREAQQPRIAPSRETVKPR*HTSSLG
Trigger: GCCAAGTGAGGACGTGTGCAAACGTGGCTTCACTGT...TTCTCTACTGGGTGCAATTCGAGGTTGCTGAGCTTCTCTCCAAAGTCTAAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CAA 90 bp CTGACGAGGTTTAAGAGGTACATCTCTCAATTCAGAGAACTGCACGGAGTGAAAACAGTGAAGCCACGTTaGCACACGTCCTCACTTGGC +
Preference number: 5 (lower is better)
Translates to: LTRFKRYISQFRELHGVKTVKPR*HTSSLG
Trigger: GCCAAGTGAGGACGTGTGCAAACGTGGCTTCACTGT...TTTCACTCCGTGCAGTTCTCTGAATTGAGAGATGTACCTCTTAAACCTCGTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp GGCAGGCTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGGTCTCAAAGATGAATTaGGAGCTGCCAAAGTTGGTC +
Preference number: 5 (lower is better)
Translates to: GRLSFQNNSELPVNLRGAVSKMN*ELPKLV
Trigger: GACCAACTTTGGCAGCTCCAAATTCATCTTTGAGAC...CGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAGCCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp GGCAGGCTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTGGAGGAATAACTCCTaGTTGTGGCTTATCCAGTCA +
Preference number: 5 (lower is better)
Translates to: GRLSFQNNSELPVNLRGAWRNNS*LWLIQS
Trigger: TGACTGGATAAGCCACAACAAGGAGTTATTCCTCCA...CGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAGCCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp TACAAAGACAGTCCTTTCCTGAGCCAGGTGCAATTCCAGAGAATGACACTTTGCGACCTCTGTGTAGGCTaGGGTCACCTGCTCATACAA +
Preference number: 5 (lower is better)
Translates to: YKDSPFLSQVQFQRMTLCDLCVG*GHLLIQ
Trigger: TTGTATGAGCAGGTGACCCAAGCCTACACAGAGGTC...GCAAAGTGTCATTCTCTGGAATTGCACCTGGCTCAGGAAAGGACTGTCTTTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CAA 90 bp TCTGTTAGGGTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAATGGTGGAGCCGCACCTaGCGGTGCTGCCAGATGCTC +
Preference number: 5 (lower is better)
Translates to: SVRVMYQVLFHGFKKDLEWWSRT*RCCQML
Trigger: GAGCATCTGGCAGCACCGCAAGGTGCGGCTCCACCA...TTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCACCCTAACAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp TACAAAGACAGTCCTTTCCTGAGCCAGGTGCAATTCCAGAGAATGACACTTTGCGCTGCTTCTAGGAGCTaGTCCGCATTGGTGTACGTA +
Preference number: 5 (lower is better)
Translates to: YKDSPFLSQVQFQRMTLCAASRS*SALVYV
Trigger: TACGTACACCAATGCGGACAAGCTCCTAGAAGCAGC...GCAAAGTGTCATTCTCTGGAATTGCACCTGGCTCAGGAAAGGACTGTCTTTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CAA 90 bp TTATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAACCTGCGCACGAAGTCTaGGATGCGCACCTCCAGGTG +
Preference number: 5 (lower is better)
Translates to: LFTVTFSLALVHTARLCEPAHEV*DAHLQV
Trigger: CACCTGGAGGTGCGCATCCAAGACTTCGTGCGCAGG...TTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp AAACTCTGTGTTTGGGGTTGGGGCTCTCTCTTGAGTGTGTTGGAAACTGGAGGACATGTCCACAACTCTTaGGTGTGTGTGTGGAAGGAA +
Preference number: 5 (lower is better)
Translates to: KLCVWGWGSLLSVLETGGHVHNS*VCVWKE
Trigger: TTCCTTCCACACACACACCAAAGAGTTGTGGACATG...TCCTCCAGTTTCCAACACACTCAAGAGAGAGCCCCAACCCCAAACACAGAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CAA 90 bp CTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTCATTGGGGTGTTTTGTTGTaGGACACAGCCGAGTCCCTG +
Preference number: 5 (lower is better)
Translates to: LSFQNNSELPVNLRGAFHWGVLL*DTAESL
Trigger: CAGGGACTCGGCTGTGTCCAACAACAAAACACCCCA...ATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp GGCAGGCTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGCAGTGGAGGTATGTGTaGAGAGGTAAAATTCACCTG +
Preference number: 5 (lower is better)
Translates to: GRLSFQNNSELPVNLRGAQWRYV*RGKIHL
Trigger: CAGGTGAATTTTACCTCTCAACACATACCTCCACTG...CGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAGCCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp TACAAAGACAGTCCTTTCCTGAGCCAGGTGCAATTCCAGAGAATGACACTTTGCCACCTTCTCCTTTGTTaGCTTGGCAGGCACCCTGAA +
Preference number: 5 (lower is better)
Translates to: YKDSPFLSQVQFQRMTLCHLLLC*LGRHPE
Trigger: TTCAGGGTGCCTGCCAAGCAAACAAAGGAGAAGGTG...GCAAAGTGTCATTCTCTGGAATTGCACCTGGCTCAGGAAAGGACTGTCTTTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CAA 90 bp GCCAGTGTTTGGGAAAGGCTAAAGTTAACCCTCATCTTCTCTACCACACATCATGCTTCACCTTCTCCTTaGTTTGCTTGGCAGGCACCC +
Preference number: 5 (lower is better)
Translates to: ASVWERLKLTLIFSTTHHASPSP*FAWQAP
Trigger: GGGTGCCTGCCAAGCAAACAAAGGAGAAGGTGAAGC...ATGATGTGTGGTAGAGAAGATGAGGGTTAACTTTAGCCTTTCCCAAACACTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CAA 90 bp TATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAATTGGCGTCCCGCAGCTaGACCTCCCGATCCGAAAGG +
Preference number: 5 (lower is better)
Translates to: YLQSHSVLLWFTLHVYVKLASRS*TSRSER
Trigger: CCTTTCGGATCGGGAGGTCAAGCTGCGGGACGCCAA...TTTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp AAACTCTGTGTTTGGGGTTGGGGCTCTCTCTTGAGTGTGTTGGAAACTGGAGGACAGACCATGCCGCTGTaGTATCTCATCAAAGAAGGT +
Preference number: 5 (lower is better)
Translates to: KLCVWGWGSLLSVLETGGQTMPL*YLIKEG
Trigger: ACCTTCTTTGATGAGATACAACAGCGGCATGGTCTG...TCCTCCAGTTTCCAACACACTCAAGAGAGAGCCCCAACCCCAAACACAGAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CAA 90 bp TACAAAGACAGTCCTTTCCTGAGCCAGGTGCAATTCCAGAGAATGACACTTTGCCTTCGGGTCCCACACTaGAAAGGCATCCTGGAGAAT +
Preference number: 5 (lower is better)
Translates to: YKDSPFLSQVQFQRMTLCLRVPH*KGILEN
Trigger: ATTCTCCAGGATGCCTTTCAAGTGTGGGACCCGAAG...GCAAAGTGTCATTCTCTGGAATTGCACCTGGCTCAGGAAAGGACTGTCTTTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CAA 90 bp TGGAGAGAAGCTCAGCAACCTCGAATTGCACCCAGTAGAGAAGAAGGGAGCCCCTGTCCTGAAGAATCTTaGATCTCCTTGCTAAAAACC +
Preference number: 5 (lower is better)
Translates to: WREAQQPRIAPSREEGSPCPEES*ISLLKT
Trigger: GGTTTTTAGCAAGGAGATCAAAGATTCTTCAGGACA...GGGGCTCCCTTCTTCTCTACTGGGTGCAATTCGAGGTTGCTGAGCTTCTCTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CAA 90 bp CATTTTAGACTTTGGAGAGAAGCTCAGCAACCTCGAATTGCACCCAGTAGAGAACCAGGCGGGGAGATTTaGCTTGGAACATGTTGCCCT +
Preference number: 5 (lower is better)
Translates to: HFRLWREAQQPRIAPSREPGGEI*LGTCCP
Trigger: AGGGCAACATGTTCCAAGCAAAATCTCCCCGCCTGG...TTCTCTACTGGGTGCAATTCGAGGTTGCTGAGCTTCTCTCCAAAGTCTAAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CAA 90 bp GTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACCAGGCCTTGCCACGGACTCGGACTaGCCTCCATTCTCGCTTGAG +
Preference number: 5 (lower is better)
Translates to: VMYQVLFHGFKKDLEPGLATDSD*PPFSLE
Trigger: CTCAAGCGAGAATGGAGGCAAGTCCGAGTCCGTGGC...AAGGCCTGGTTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp CTGACGAGGTTTAAGAGGTACATCTCTCAATTCAGAGAACTGCACGGAGTGAAACACTTCTTAAGAGTGTaGGTGGAGCGCTTGGGACCC +
Preference number: 5 (lower is better)
Translates to: LTRFKRYISQFRELHGVKHFLRV*VERLGP
Trigger: GGGTCCCAAGCGCTCCACCAACACTCTTAAGAAGTG...TTTCACTCCGTGCAGTTCTCTGAATTGAGAGATGTACCTCTTAAACCTCGTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp CTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTCATGTTTCATCCCCAGGCTaGGGAGATCCCAGGTCAAAG +
Preference number: 5 (lower is better)
Translates to: LSFQNNSELPVNLRGAFHVSSPG*GDPRSK
Trigger: CTTTGACCTGGGATCTCCCAAGCCTGGGGATGAAAC...ATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp GTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACCAGGCCTTTATAGCTGGAGCCCTTaGGGGGCTTCTCTGAGCCCG +
Preference number: 5 (lower is better)
Translates to: VMYQVLFHGFKKDLEPGLYSWSP*GASLSP
Trigger: CGGGCTCAGAGAAGCCCCCAAAGGGCTCCAGCTATA...AAGGCCTGGTTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp AAGGAAGAAGGTCTACATTCCTCGAAACTCATCCAGCACAATTCATTGACCATAATGGACGAGGTCCCATaGCAGCCTCCCAGGTCGTTC +
Preference number: 5 (lower is better)
Translates to: KEEGLHSSKLIQHNSLTIMDEVP*QPPRSF
Trigger: GAACGACCTGGGAGGCTGCAATGGGACCTCGTCCAT...TATGGTCAATGAATTGTGCTGGATGAGTTTCGAGGAATGTAGACCTTCTTCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR CAA 90 bp TATACACCAGAAAGCAGCATTGGCCTCAAAGTACAATTAGTCCTTTTAGTTCAGTCTGCTGCTGTGGCTTaGGTGAGGGGCGCCAGGATG +
Preference number: 5 (lower is better)
Translates to: YTPESSIGLKVQLVLLVQSAAVA*VRGARM
Trigger: CATCCTGGCGCCCCTCACCAAAGCCACAGCAGCAGA...CTGAACTAAAAGGACTAATTGTACTTTGAGGCCAATGCTGCTTTCTGGTGTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp GGCAGGCTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGCATGAACATGACTTCTaGATGCTCCCGTCACTACTT +
Preference number: 5 (lower is better)
Translates to: GRLSFQNNSELPVNLRGAHEHDF*MLPSLL
Trigger: AAGTAGTGACGGGAGCATCAAGAAGTCATGTTCATG...CGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAGCCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp GGCAGGCTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGAAATCTCTGGCAGCATaGCTCACACCACAGAAGTAT +
Preference number: 5 (lower is better)
Translates to: GRLSFQNNSELPVNLRGAKSLAA*LTPQKY
Trigger: ATACTTCTGTGGTGTGAGCAATGCTGCCAGAGATTT...CGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAGCCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp GGCAGGCTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGACATTCAGTCTTGCTTaGGTTCACACTGCACGTCTA +
Preference number: 5 (lower is better)
Translates to: GRLSFQNNSELPVNLRGATFSLA*VHTARL
Trigger: TAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGT...CGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAGCCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS GCA 90 bp TTGTCTGCCCAGGTAACAAAGCAGTGTCCCACATCCTCAGGCAGTTaGTCGTACTTCTCCAGCTCTTTGAGGAAGATGTTGTTATGGAAA +
Preference number: 5 (lower is better)
Translates to: LSAQVTKQCPTSSGS*SYFSSSLRKMLLWK
Trigger: TTTCCATAACAACATCTTCCTCAAAGAGCTGGAGAAGTACGAGCAACTGCCTGAGGATGTGGGACACTGCTTTGTTACCTGGGCAGACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENST00000240874.7
ENST00000354186.8
ENST00000360013.7
ENST00000393501.5
ENST00000460856.5
ENST00000682277.1
ENST00000682506.1
ENST00000682540.1
ENST00000682575.1
ENST00000682695.1
ENST00000683146.1
ENST00000683356.1
ENST00000683592.1
ENST00000683922.1
ENST00000684276.1
ENST00000684360.1
ENST00000684374.1
ENST00000684382.1
ENST00000684410.1
CDS GCA 90 bp ATATCCACAGGCTCCAGCAAGCATCTATTCCACCTAGACTTTCAATaGCTCATTAGGAAGACTGGGACCTGTCTTCTAACCTCGATCCAG +
Preference number: 5 (lower is better)
Translates to: ISTGSSKHLFHLDFQ*LIRKTGTCLLTSIQ
Trigger: CTGGATCGAGGTTAGAAGACAGGTCCCAGTCTTCCTAATGAGGCATTGAAAGTCTAGGTGGAATAGATGCTTGCTGGAGCCTGTGGATAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488825.5
CDS GCA 90 bp TGGCATCAAAATGACCCCTTCACCAGAGCAGTTATAATTTGTCCATaGAGCACTGAGGAGGTGAACTTATCCTGGTCATGCAGGTCTTGG +
Preference number: 5 (lower is better)
Translates to: WHQNDPFTRAVIICP*STEEVNLSWSCRSW
Trigger: CCAAGACCTGCATGACCAGGATAAGTTCACCTCCTCAGTGCTGCATGGACAAATTATAACTGCTCTGGTGAAGGGGTCATTTTGATGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000684410.1
CDS GCA 90 bp AGATCACTTCTGTGGCTAGGCTATGTGCGACTGTGGCTTCCATCTTaGCAGAGGATTCTCTTTCTTGCTGGCTTTGATGAAACAAGCTAC +
Preference number: 5 (lower is better)
Translates to: RSLLWLGYVRLWLPS*QRILFLAGFDETSY
Trigger: GTAGCTTGTTTCATCAAAGCCAGCAAGAAAGAGAATCCTCTGGCAAGATGGAAGCCACAGTCGCACATAGCCTAGCCACAGAAGTGATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683280.1
CDS GCA 90 bp ATATCCACAGGCTCCAGCAAGCATCTATTCCACCTAGACTTTCAATaGCTCATTAGGAAGACTGGGACCTGTCTTCTAACCTGCCATGTC +
Preference number: 5 (lower is better)
Translates to: ISTGSSKHLFHLDFQ*LIRKTGTCLLTCHV
Trigger: GACATGGCAGGTTAGAAGACAGGTCCCAGTCTTCCTAATGAGGCATTGAAAGTCTAGGTGGAATAGATGCTTGCTGGAGCCTGTGGATAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684441.1
CDS-3UTR CAA 90 bp GTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACCAGGCCTTGCTTCCTGCAGCGTTTaGAGGAGGGGCTTGATGAGG +
Preference number: 5 (lower is better)
Translates to: VMYQVLFHGFKKDLEPGLASCSV*RRGLMR
Trigger: CCTCATCAAGCCCCTCCTCAAAACGCTGCAGGAAGC...AAGGCCTGGTTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp TATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAAAGGTGCACGGCGCTGTaGAAGAACTCCTCCAGGGAG +
Preference number: 5 (lower is better)
Translates to: YLQSHSVLLWFTLHVYVKRCTAL*KNSSRE
Trigger: CTCCCTGGAGGAGTTCTTCAACAGCGCCGTGCACCT...TTTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp TATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAACGGGTGGAGTGCAGCTaGTCCAGGAGACTGGTGATC +
Preference number: 5 (lower is better)
Translates to: YLQSHSVLLWFTLHVYVKRVECS*SRRLVI
Trigger: GATCACCAGTCTCCTGGACAAGCTGCACTCCACCCG...TTTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp CTGACGAGGTTTAAGAGGTACATCTCTCAATTCAGAGAACTGCACGGAGTGAAAGCTGCTTCTAGGAGCTaGTCCGCATTGGTGTACGTA +
Preference number: 5 (lower is better)
Translates to: LTRFKRYISQFRELHGVKAASRS*SALVYV
Trigger: TACGTACACCAATGCGGACAAGCTCCTAGAAGCAGC...TTTCACTCCGTGCAGTTCTCTGAATTGAGAGATGTACCTCTTAAACCTCGTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp TCTGTTAGGGTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACCTGCGCACGAAGTCTaGGATGCGCACCTCCAGGTG +
Preference number: 5 (lower is better)
Translates to: SVRVMYQVLFHGFKKDLEPAHEV*DAHLQV
Trigger: CACCTGGAGGTGCGCATCCAAGACTTCGTGCGCAGG...TTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCACCCTAACAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp GCCAGTGTTTGGGAAAGGCTAAAGTTAACCCTCATCTTCTCTACCACACATCATAGGAAGATGTCCAGCTaGATCTTCCGCTCGTGGAAC +
Preference number: 5 (lower is better)
Translates to: ASVWERLKLTLIFSTTHHRKMSS*IFRSWN
Trigger: GTTCCACGAGCGGAAGATCAAGCTGGACATCTTCCT...ATGATGTGTGGTAGAGAAGATGAGGGTTAACTTTAGCCTTTCCCAAACACTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CAA 90 bp CATTTTAGACTTTGGAGAGAAGCTCAGCAACCTCGAATTGCACCCAGTAGAGAAAGCATTGACTCTCCATaGCGGATCCATCCCAGAACC +
Preference number: 5 (lower is better)
Translates to: HFRLWREAQQPRIAPSRESIDSP*RIHPRT
Trigger: GGTTCTGGGATGGATCCGCAATGGAGAGTCAATGCT...TTCTCTACTGGGTGCAATTCGAGGTTGCTGAGCTTCTCTCCAAAGTCTAAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CAA 90 bp CTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTCATAGCATTGACTCTCCATaGCGGATCCATCCCAGAACC +
Preference number: 5 (lower is better)
Translates to: LSFQNNSELPVNLRGAFHSIDSP*RIHPRT
Trigger: GGTTCTGGGATGGATCCGCAATGGAGAGTCAATGCT...ATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp TCTGTTAGGGTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAAGGACTCGATGGCCAGTaGGAACTGCTCGTGCTCCCG +
Preference number: 5 (lower is better)
Translates to: SVRVMYQVLFHGFKKDLEGLDGQ*ELLVLP
Trigger: CGGGAGCACGAGCAGTTCCAACTGGCCATCGAGTCC...TTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCACCCTAACAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360013.7
CDS-3UTR CAA 90 bp GTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACCAGGCCTTCAGGATGGCTTTCACTaGTTGCTCGGGTCCCCGAGT +
Preference number: 5 (lower is better)
Translates to: VMYQVLFHGFKKDLEPGLQDGFH*LLGSPS
Trigger: ACTCGGGGACCCGAGCAACAAGTGAAAGCCATCCTG...AAGGCCTGGTTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp AAACTCTGTGTTTGGGGTTGGGGCTCTCTCTTGAGTGTGTTGGAAACTGGAGGACAGTGGAGGTATGTGTaGAGAGGTAAAATTCACCTG +
Preference number: 5 (lower is better)
Translates to: KLCVWGWGSLLSVLETGGQWRYV*RGKIHL
Trigger: CAGGTGAATTTTACCTCTCAACACATACCTCCACTG...TCCTCCAGTTTCCAACACACTCAAGAGAGAGCCCCAACCCCAAACACAGAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CAA 90 bp CCCCATAACCCAGCCAGGGAAATAAGCCCAACTTCAGGACCTCTCAGAAATCAGTACTTCTCCAGCTCTTaGAGGAAGATGTTGTTATGG +
Preference number: 5 (lower is better)
Translates to: PHNPAREISPTSGPLRNQYFSSS*RKMLLW
Trigger: CCATAACAACATCTTCCTCAAAGAGCTGGAGAAGTA...CTGATTTCTGAGAGGTCCTGAAGTTGGGCTTATTTCCCTGGCTGGGTTATGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CAA 90 bp CCCCATAACCCAGCCAGGGAAATAAGCCCAACTTCAGGACCTCTCAGAAATCAGTCCAGGATAAGCTGGTaGGAATCAGGCTTGTTTTTA +
Preference number: 5 (lower is better)
Translates to: PHNPAREISPTSGPLRNQSRISW*ESGLFL
Trigger: TAAAAACAAGCCTGATTCCAACCAGCTTATCCTGGA...CTGATTTCTGAGAGGTCCTGAAGTTGGGCTTATTTCCCTGGCTGGGTTATGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CAA 90 bp CTGACGAGGTTTAAGAGGTACATCTCTCAATTCAGAGAACTGCACGGAGTGAAACTTCGGGTCCCACACTaGAAAGGCATCCTGGAGAAT +
Preference number: 5 (lower is better)
Translates to: LTRFKRYISQFRELHGVKLRVPH*KGILEN
Trigger: ATTCTCCAGGATGCCTTTCAAGTGTGGGACCCGAAG...TTTCACTCCGTGCAGTTCTCTGAATTGAGAGATGTACCTCTTAAACCTCGTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp CATTTTAGACTTTGGAGAGAAGCTCAGCAACCTCGAATTGCACCCAGTAGAGAACTTCGGGTCCCACACTaGAAAGGCATCCTGGAGAAT +
Preference number: 5 (lower is better)
Translates to: HFRLWREAQQPRIAPSRELRVPH*KGILEN
Trigger: ATTCTCCAGGATGCCTTTCAAGTGTGGGACCCGAAG...TTCTCTACTGGGTGCAATTCGAGGTTGCTGAGCTTCTCTCCAAAGTCTAAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CAA 90 bp CAGCAATTCTCAGTCATGCAAATGCCCGTGTTAAAGTTCTCCATTGGATTTAAAGACCACAAGGCGAATTaGCAGGGATCGCCCTCCACG +
Preference number: 5 (lower is better)
Translates to: QQFSVMQMPVLKFSIGFKDHKAN*QGSPST
Trigger: CGTGGAGGGCGATCCCTGCAAATTCGCCTTGTGGTC...TTTAAATCCAATGGAGAACTTTAACACGGGCATTTGCATGACTGAGAATTGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CAA 90 bp TATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAAGACCACAAGGCGAATTaGCAGGGATCGCCCTCCACG +
Preference number: 5 (lower is better)
Translates to: YLQSHSVLLWFTLHVYVKDHKAN*QGSPST
Trigger: CGTGGAGGGCGATCCCTGCAAATTCGCCTTGTGGTC...TTTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp CCCCATAACCCAGCCAGGGAAATAAGCCCAACTTCAGGACCTCTCAGAAATCAGTCTCTCTTGAGTGTGTaGGAAACTGGAGGACTTTTA +
Preference number: 5 (lower is better)
Translates to: PHNPAREISPTSGPLRNQSLLSV*ETGGLL
Trigger: TAAAAGTCCTCCAGTTTCCAACACACTCAAGAGAGA...CTGATTTCTGAGAGGTCCTGAAGTTGGGCTTATTTCCCTGGCTGGGTTATGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CAA 90 bp CATTTTAGACTTTGGAGAGAAGCTCAGCAACCTCGAATTGCACCCAGTAGAGAAGGTTGGGGCTCTCTCTaGAGTGTGTTGGAAACTGGA +
Preference number: 5 (lower is better)
Translates to: HFRLWREAQQPRIAPSREGWGSL*SVLETG
Trigger: TCCAGTTTCCAACACACTCAAGAGAGAGCCCCAACC...TTCTCTACTGGGTGCAATTCGAGGTTGCTGAGCTTCTCTCCAAAGTCTAAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CAA 90 bp GTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACCAGGCCTTGTCAGCGTTGGCGGCTaGCAGAACAACCCTCTCAGA +
Preference number: 5 (lower is better)
Translates to: VMYQVLFHGFKKDLEPGLVSVGG*QNNPLR
Trigger: TCTGAGAGGGTTGTTCTGCAAGCCGCCAACGCTGAC...AAGGCCTGGTTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp GTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACCAGGCCTTGGGAAGCCTGGCAGGTaGAGACCTCATCACAGCTGT +
Preference number: 5 (lower is better)
Translates to: VMYQVLFHGFKKDLEPGLGKPGR*RPHHSC
Trigger: ACAGCTGTGATGAGGTCTCAACCTGCCAGGCTTCCC...AAGGCCTGGTTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp TCAGGTCATCCACAGTGGACAGAACAGAACTTGCCAAGCTGGACTTTATGGATAAACCCTGGACTGCCATaGGAGGTAGATATCTTCAGG +
Preference number: 5 (lower is better)
Translates to: SGHPQWTEQNLPSWTLWINPGLP*EVDIFR
Trigger: CCTGAAGATATCTACCTCCAATGGCAGTCCAGGGTT...TATCCATAAAGTCCAGCTTGGCAAGTTCTGTTCTGTCCACTGTGGATGACCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR CAA 90 bp TTATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAATGGACGAGGTCCCATaGCAGCCTCCCAGGTCGTTC +
Preference number: 5 (lower is better)
Translates to: LFTVTFSLALVHTARLCEMDEVP*QPPRSF
Trigger: GAACGACCTGGGAGGCTGCAATGGGACCTCGTCCAT...TTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp TTATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAACACATGTTCTGCTGGTaGACGGCGAGGACCTGGACC +
Preference number: 5 (lower is better)
Translates to: LFTVTFSLALVHTARLCEHMFCW*TARTWT
Trigger: GGTCCAGGTCCTCGCCGTCAACCAGCAGAACATGTG...TTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp TCTGTTAGGGTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAATCTGCTGCTGTGGCTTaGGTGAGGGGCGCCAGGATG +
Preference number: 5 (lower is better)
Translates to: SVRVMYQVLFHGFKKDLESAAVA*VRGARM
Trigger: CATCCTGGCGCCCCTCACCAAAGCCACAGCAGCAGA...TTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCACCCTAACAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp GGCAGGCTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTAACAGAGACTTTGTaGCCCAGAATATCCTTGGGT +
Preference number: 5 (lower is better)
Translates to: GRLSFQNNSELPVNLRGALTETL*PRISLG
Trigger: ACCCAAGGATATTCTGGGCAACAAAGTCTCTGTTAA...CGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAGCCTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp CTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTCATGGCTGCTGGAACACCTaGCACTTTGACTGTTGCAGA +
Preference number: 5 (lower is better)
Translates to: LSFQNNSELPVNLRGAFHGCWNT*HFDCCR
Trigger: TCTGCAACAGTCAAAGTGCAAGGTGTTCCAGCAGCC...ATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp TTATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAGGAGACGGGGATGCCTaGAATGACTTCTGGGGCAGC +
Preference number: 5 (lower is better)
Translates to: LFTVTFSLALVHTARLCEGDGDA*NDFWGS
Trigger: GCTGCCCCAGAAGTCATTCAAGGCATCCCCGTCTCC...TTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp TATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAAGGAGACGGGGATGCCTaGAATGACTTCTGGGGCAGC +
Preference number: 5 (lower is better)
Translates to: YLQSHSVLLWFTLHVYVKGDGDA*NDFWGS
Trigger: GCTGCCCCAGAAGTCATTCAAGGCATCCCCGTCTCC...TTTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp GGCAGGCTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGGAAAGTGTTGGTACGTaGTTCATAGGAACTGTAGGA +
Preference number: 5 (lower is better)
Translates to: GRLSFQNNSELPVNLRGAESVGT*FIGTVG
Trigger: TCCTACAGTTCCTATGAACAACGTACCAACACTTTC...CGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAGCCTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp GTAAAAGCTGATATGAAAGCTTGGGGTCTGTCTAACATTCTGTCAACTGCCCCCACTCTCTTATCTCTGTaGGGAGGGACCAGGAGCTTT +
Preference number: 5 (lower is better)
Translates to: VKADMKAWGLSNILSTAPTLLSL*GGTRSF
Trigger: AAAGCTCCTGGTCCCTCCCAACAGAGATAAGAGAGT...GGGGGCAGTTGACAGAATGTTAGACAGACCCCAAGCTTTCATATCAGCTTTTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR CAA 90 bp TTATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAACTTCTCGATGGCCAGTaGGAACTGCTCGTGCTCCCG +
Preference number: 5 (lower is better)
Translates to: LFTVTFSLALVHTARLCELLDGQ*ELLVLP
Trigger: CGGGAGCACGAGCAGTTCCAACTGGCCATCGAGAAG...TTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354186.8
CDS-3UTR CAA 90 bp CAGCAATTCTCAGTCATGCAAATGCCCGTGTTAAAGTTCTCCATTGGATTTAAACTTCTCGATGGCCAGTaGGAACTGCTCGTGCTCCCG +
Preference number: 5 (lower is better)
Translates to: QQFSVMQMPVLKFSIGFKLLDGQ*ELLVLP
Trigger: CGGGAGCACGAGCAGTTCCAACTGGCCATCGAGAAG...TTTAAATCCAATGGAGAACTTTAACACGGGCATTTGCATGACTGAGAATTGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460856.5
CDS-3UTR CAA 90 bp CTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTCATCATCCACCAGAGAGCTaGTCACTGTCCACTGTGTTC +
Preference number: 5 (lower is better)
Translates to: LSFQNNSELPVNLRGAFHHPPES*SLSTVF
Trigger: GAACACAGTGGACAGTGACAAGCTCTCTGGTGGATG...ATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS GCA 90 bp ATATCCACAGGCTCCAGCAAGCATCTATTCCACCTAGACTTTCAATaGCTCATTAGGAAGACTGGGACCTGTCTTCTAACCCTTAGCCAT +
Preference number: 5 (lower is better)
Translates to: ISTGSSKHLFHLDFQ*LIRKTGTCLLTLSH
Trigger: ATGGCTAAGGGTTAGAAGACAGGTCCCAGTCTTCCTAATGAGGCATTGAAAGTCTAGGTGGAATAGATGCTTGCTGGAGCCTGTGGATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477496.5
CDS GCA 90 bp GTTTTTCCCCAGGTAACAAAGCAGTGTCCCACATCCTCAGGCAGTTaGTCGTACTTCTCCAGCTCTTTGAGGAAGATGTTGTTATGGAAA +
Preference number: 5 (lower is better)
Translates to: VFPQVTKQCPTSSGS*SYFSSSLRKMLLWK
Trigger: TTTCCATAACAACATCTTCCTCAAAGAGCTGGAGAAGTACGAGCAACTGCCTGAGGATGTGGGACACTGCTTTGTTACCTGGGGAAAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484224.6
CDS GCA 90 bp CCAGAGCAGCAGTATAGGCAGCTTGTTTTTGACCAACTTTTCTATTaGATTGACAAGGTCTGCAGCAGTAGGTACTTCAGTGGAAGCCTG +
Preference number: 5 (lower is better)
Translates to: PEQQYRQLVFDQLFY*IDKVCSSRYFSGSL
Trigger: CAGGCTTCCACTGAAGTACCTACTGCTGCAGACCTTGTCAATGCAATAGAAAAGTTGGTCAAAAACAAGCTGCCTATACTGCTGCTCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000682290.1
CDS CCA 90 bp TTGATGAAATCTCTGGCAGCATTGCTCACACCACAGAAGTATTCATaGGGGAAGCTGAAATCCACCCTGCATACGTTGATACATGTCTCC +
Preference number: 5 (lower is better)
Translates to: LMKSLAALLTPQKYS*GKLKSTLHTLIHVS
Trigger: GGAGACATGTATCAACGTATGCAGGGTGGATTTCAGCTTCCCCCATGAATACTTCTGTGGTGTGAGCAATGCTGCCAGAGATTTCATCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
ENST00000682506.1
ENST00000684480.1
CDS-3UTR CAA 90 bp TATACACCAGAAAGCAGCATTGGCCTCAAAGTACAATTAGTCCTTTTAGTTCAGTGCACACGTCCTCACTaGGCACGCTGGCCAAATACG +
Preference number: 5 (lower is better)
Translates to: YTPESSIGLKVQLVLLVQCTRPH*ARWPNT
Trigger: CGTATTTGGCCAGCGTGCCAAGTGAGGACGTGTGCA...CTGAACTAAAAGGACTAATTGTACTTTGAGGCCAATGCTGCTTTCTGGTGTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp TATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAATTGATGAGGTCCCACTaGGAGCCCCGCATGTCGATG +
Preference number: 5 (lower is better)
Translates to: YLQSHSVLLWFTLHVYVKLMRSH*EPRMSM
Trigger: CATCGACATGCGGGGCTCCAAGTGGGACCTCATCAA...TTTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp TTATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAGCTTCCTGCAGCGTTTaGAGGAGGGGCTTGATGAGG +
Preference number: 5 (lower is better)
Translates to: LFTVTFSLALVHTARLCEASCSV*RRGLMR
Trigger: CCTCATCAAGCCCCTCCTCAAAACGCTGCAGGAAGC...TTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp CAGCAATTCTCAGTCATGCAAATGCCCGTGTTAAAGTTCTCCATTGGATTTAAAGCTTCCTGCAGCGTTTaGAGGAGGGGCTTGATGAGG +
Preference number: 5 (lower is better)
Translates to: QQFSVMQMPVLKFSIGFKASCSV*RRGLMR
Trigger: CCTCATCAAGCCCCTCCTCAAAACGCTGCAGGAAGC...TTTAAATCCAATGGAGAACTTTAACACGGGCATTTGCATGACTGAGAATTGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CAA 90 bp TTATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAACCTTCACTGCACATCTaGCACCAGGCATCCACTCCC +
Preference number: 5 (lower is better)
Translates to: LFTVTFSLALVHTARLCEPSLHI*HQASTP
Trigger: GGGAGTGGATGCCTGGTGCAAGATGTGCAGTGAAGG...TTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp CTGACGAGGTTTAAGAGGTACATCTCTCAATTCAGAGAACTGCACGGAGTGAAAACATCAAGTAGTGCTTaGCCATCCTGGCTGACCTCT +
Preference number: 5 (lower is better)
Translates to: LTRFKRYISQFRELHGVKTSSSA*PSWLTS
Trigger: AGAGGTCAGCCAGGATGGCAAAGCACTACTTGATGT...TTTCACTCCGTGCAGTTCTCTGAATTGAGAGATGTACCTCTTAAACCTCGTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp TATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAAGACAAAGAGCTGGCATaGACCAGGCTGGCGTTGAGC +
Preference number: 5 (lower is better)
Translates to: YLQSHSVLLWFTLHVYVKDKELA*TRLALS
Trigger: GCTCAACGCCAGCCTGGTCAATGCCAGCTCTTTGTC...TTTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp CTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTCATAAGGCCACAGAGGCATaGACCAATTTTAGCCGGTCT +
Preference number: 5 (lower is better)
Translates to: LSFQNNSELPVNLRGAFHKATEA*TNFSRS
Trigger: AGACCGGCTAAAATTGGTCAATGCCTCTGTGGCCTT...ATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp TATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAAGATGGCTTTCACTTGTaGCTCGGGTCCCCGAGTGTG +
Preference number: 5 (lower is better)
Translates to: YLQSHSVLLWFTLHVYVKDGFHL*LGSPSV
Trigger: CACACTCGGGGACCCGAGCAACAAGTGAAAGCCATC...TTTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp CAGCAATTCTCAGTCATGCAAATGCCCGTGTTAAAGTTCTCCATTGGATTTAAACAGGATGGCTTTCACTaGTTGCTCGGGTCCCCGAGT +
Preference number: 5 (lower is better)
Translates to: QQFSVMQMPVLKFSIGFKQDGFH*LLGSPS
Trigger: ACTCGGGGACCCGAGCAACAAGTGAAAGCCATCCTG...TTTAAATCCAATGGAGAACTTTAACACGGGCATTTGCATGACTGAGAATTGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CAA 90 bp TATACACCAGAAAGCAGCATTGGCCTCAAAGTACAATTAGTCCTTTTAGTTCAGCAGGATGGCTTTCACTaGTTGCTCGGGTCCCCGAGT +
Preference number: 5 (lower is better)
Translates to: YTPESSIGLKVQLVLLVQQDGFH*LLGSPS
Trigger: ACTCGGGGACCCGAGCAACAAGTGAAAGCCATCCTG...CTGAACTAAAAGGACTAATTGTACTTTGAGGCCAATGCTGCTTTCTGGTGTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp CTGACGAGGTTTAAGAGGTACATCTCTCAATTCAGAGAACTGCACGGAGTGAAATTCTCCTTTGTTTGCTaGGCAGGCACCCTGAATTCC +
Preference number: 5 (lower is better)
Translates to: LTRFKRYISQFRELHGVKFSFVC*AGTLNS
Trigger: GGAATTCAGGGTGCCTGCCAAGCAAACAAAGGAGAA...TTTCACTCCGTGCAGTTCTCTGAATTGAGAGATGTACCTCTTAAACCTCGTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp TATACACCAGAAAGCAGCATTGGCCTCAAAGTACAATTAGTCCTTTTAGTTCAGTCATTGACTTCGTGGTaGGCGTCCCGCAGCTTGACC +
Preference number: 5 (lower is better)
Translates to: YTPESSIGLKVQLVLLVQSLTSW*ASRSLT
Trigger: GGTCAAGCTGCGGGACGCCAACCACGAAGTCAATGA...CTGAACTAAAAGGACTAATTGTACTTTGAGGCCAATGCTGCTTTCTGGTGTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp CCCCATAACCCAGCCAGGGAAATAAGCCCAACTTCAGGACCTCTCAGAAATCAGGAAATCGTAGATCTCTaGGATGTTGCCAAAGATGAT +
Preference number: 5 (lower is better)
Translates to: PHNPAREISPTSGPLRNQEIVDL*DVAKDD
Trigger: ATCATCTTTGGCAACATCCAAGAGATCTACGATTTC...CTGATTTCTGAGAGGTCCTGAAGTTGGGCTTATTTCCCTGGCTGGGTTATGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CAA 90 bp AAACTCTGTGTTTGGGGTTGGGGCTCTCTCTTGAGTGTGTTGGAAACTGGAGGATACTTCTCCAGCTCTTaGAGGAAGATGTTGTTATGG +
Preference number: 5 (lower is better)
Translates to: KLCVWGWGSLLSVLETGGYFSSS*RKMLLW
Trigger: CCATAACAACATCTTCCTCAAAGAGCTGGAGAAGTA...TCCTCCAGTTTCCAACACACTCAAGAGAGAGCCCCAACCCCAAACACAGAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CAA 90 bp AAACTCTGTGTTTGGGGTTGGGGCTCTCTCTTGAGTGTGTTGGAAACTGGAGGATTCCTTCAGGAGCAGTaGATATTTGGTGATCCTTTG +
Preference number: 5 (lower is better)
Translates to: KLCVWGWGSLLSVLETGGFLQEQ*IFGDPL
Trigger: CAAAGGATCACCAAATATCAACTGCTCCTGAAGGAA...TCCTCCAGTTTCCAACACACTCAAGAGAGAGCCCCAACCCCAAACACAGAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CAA 90 bp TACAAAGACAGTCCTTTCCTGAGCCAGGTGCAATTCCAGAGAATGACACTTTGCTTGATCCACTCCTGCTaGGTTTCAATGTTGGAGGCT +
Preference number: 5 (lower is better)
Translates to: YKDSPFLSQVQFQRMTLCLIHSC*VSMLEA
Trigger: AGCCTCCAACATTGAAACCAAGCAGGAGTGGATCAA...GCAAAGTGTCATTCTCTGGAATTGCACCTGGCTCAGGAAAGGACTGTCTTTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CAA 90 bp CATTTTAGACTTTGGAGAGAAGCTCAGCAACCTCGAATTGCACCCAGTAGAGAAACAAGGTTGCCATCCTaGTCACTGTCCACTGTGTTC +
Preference number: 5 (lower is better)
Translates to: HFRLWREAQQPRIAPSRETRLPS*SLSTVF
Trigger: GAACACAGTGGACAGTGACAAGGATGGCAACCTTGT...TTCTCTACTGGGTGCAATTCGAGGTTGCTGAGCTTCTCTCCAAAGTCTAAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CAA 90 bp CATTTTAGACTTTGGAGAGAAGCTCAGCAACCTCGAATTGCACCCAGTAGAGAACTCAGCAACCTCGAATaGCACCCAGTAGAGAAGAAG +
Preference number: 5 (lower is better)
Translates to: HFRLWREAQQPRIAPSRELSNLE*HPVEKK
Trigger: CTTCTTCTCTACTGGGTGCAATTCGAGGTTGCTGAG...TTCTCTACTGGGTGCAATTCGAGGTTGCTGAGCTTCTCTCCAAAGTCTAAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CAA 90 bp AAACTCTGTGTTTGGGGTTGGGGCTCTCTCTTGAGTGTGTTGGAAACTGGAGGATCTCTCTTGAGTGTGTaGGAAACTGGAGGACTTTTA +
Preference number: 5 (lower is better)
Translates to: KLCVWGWGSLLSVLETGGSLLSV*ETGGLL
Trigger: TAAAAGTCCTCCAGTTTCCAACACACTCAAGAGAGA...TCCTCCAGTTTCCAACACACTCAAGAGAGAGCCCCAACCCCAAACACAGAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CAA 90 bp GTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACCAGGCCTTGTTTCATCCCCAGGCTaGGGAGATCCCAGGTCAAAG +
Preference number: 5 (lower is better)
Translates to: VMYQVLFHGFKKDLEPGLVSSPG*GDPRSK
Trigger: CTTTGACCTGGGATCTCCCAAGCCTGGGGATGAAAC...AAGGCCTGGTTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp TTATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAATGTCTCCCTGAGGGGTaGTTTCATCCCCAGGCTTGG +
Preference number: 5 (lower is better)
Translates to: LFTVTFSLALVHTARLCECLPEG*FHPQAW
Trigger: CCAAGCCTGGGGATGAAACAACCCCTCAGGGAGACA...TTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp CTGACGAGGTTTAAGAGGTACATCTCTCAATTCAGAGAACTGCACGGAGTGAAAAACTTGCAGGGATCATaGTCCACATTCTCCTCCAGG +
Preference number: 5 (lower is better)
Translates to: LTRFKRYISQFRELHGVKNLQGS*STFSSR
Trigger: CCTGGAGGAGAATGTGGACAATGATCCCTGCAAGTT...TTTCACTCCGTGCAGTTCTCTGAATTGAGAGATGTACCTCTTAAACCTCGTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp TTATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAGTCAGCGTTGGCGGCTaGCAGAACAACCCTCTCAGA +
Preference number: 5 (lower is better)
Translates to: LFTVTFSLALVHTARLCEVSVGG*QNNPLR
Trigger: TCTGAGAGGGTTGTTCTGCAAGCCGCCAACGCTGAC...TTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp TATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAATGCTGGATGTCAGCGTaGGCGGCTTGCAGAACAACC +
Preference number: 5 (lower is better)
Translates to: YLQSHSVLLWFTLHVYVKCWMSA*AACRTT
Trigger: GGTTGTTCTGCAAGCCGCCAACGCTGACATCCAGCA...TTTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp TCTGTTAGGGTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAATATAGCTGGAGCCCTTaGGGGGCTTCTCTGAGCCCG +
Preference number: 5 (lower is better)
Translates to: SVRVMYQVLFHGFKKDLEYSWSP*GASLSP
Trigger: CGGGCTCAGAGAAGCCCCCAAAGGGCTCCAGCTATA...TTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCACCCTAACAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp CTGACGAGGTTTAAGAGGTACATCTCTCAATTCAGAGAACTGCACGGAGTGAAAAACCCTGGACTGCCATaGGAGGTAGATATCTTCAGG +
Preference number: 5 (lower is better)
Translates to: LTRFKRYISQFRELHGVKNPGLP*EVDIFR
Trigger: CCTGAAGATATCTACCTCCAATGGCAGTCCAGGGTT...TTTCACTCCGTGCAGTTCTCTGAATTGAGAGATGTACCTCTTAAACCTCGTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp TATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAACCCAGGTCGTTCTGCTaGCTGGCTTCGAACTTGTCC +
Preference number: 5 (lower is better)
Translates to: YLQSHSVLLWFTLHVYVKPRSFC*LASNLS
Trigger: GGACAAGTTCGAAGCCAGCAAGCAGAACGACCTGGG...TTTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp TCTGTTAGGGTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACACATGTTCTGCTGGTaGACGGCGAGGACCTGGACC +
Preference number: 5 (lower is better)
Translates to: SVRVMYQVLFHGFKKDLEHMFCW*TARTWT
Trigger: GGTCCAGGTCCTCGCCGTCAACCAGCAGAACATGTG...TTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCACCCTAACAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp ATGTGCGATGGTCCCTATGGGGAAACCTGTCCACTTATGAATAAGGCCCTTTGTCATGAACATGACTTCTaGATGCTCCCGTCACTACTT +
Preference number: 5 (lower is better)
Translates to: MCDGPYGETCPLMNKALCHEHDF*MLPSLL
Trigger: AAGTAGTGACGGGAGCATCAAGAAGTCATGTTCATG...ACAAAGGGCCTTATTCATAAGTGGACAGGTTTCCCCATAGGGACCATCGCACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR CAA 90 bp TATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAAGGCCGCCCACAGACTTaGCACTGCAGTATCACTGTG +
Preference number: 5 (lower is better)
Translates to: YLQSHSVLLWFTLHVYVKGRPQT*HCSITV
Trigger: CACAGTGATACTGCAGTGCAAAGTCTGTGGGCGGCC...TTTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp CCCAGGATCATCATCATCTGGGATTCCTTGTTATTTCCAACTTGCTGTGGAGAAGAGCTGCCAGTGAATTaGCGGGGAGCGTTTCATATA +
Preference number: 5 (lower is better)
Translates to: PRIIIIWDSLLFPTCCGEELPVN*RGAFHI
Trigger: TATATGAAACGCTCCCCGCAAATTCACTGGCAGCTC...TTCTCCACAGCAAGTTGGAAATAACAAGGAATCCCAGATGATGATGATCCTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS TCA 90 bp GTAATTGGAGGCACTGCTCTAGCCGCTTATGAGTCTGCTCTGCATTaGGCTCCAATTCATGCTGCTTCTCATGGAGAAATTCCAATAACT +
Preference number: 5 (lower is better)
Translates to: VIGGTALAAYESALH*APIHAASHGEIPIT
Trigger: AGTTATTGGAATTTCTCCATGAGAAGCAGCATGAATTGGAGCTCAATGCAGAGCAGACTCATAAGCGGCTAGAGCAGTGCCTCCAATTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 21 transcripts:
ENST00000240874.7
ENST00000354186.8
ENST00000360013.7
ENST00000393501.5
ENST00000460856.5
ENST00000484224.6
ENST00000682277.1
ENST00000682506.1
ENST00000682540.1
ENST00000682575.1
ENST00000682674.1
ENST00000682695.1
ENST00000683146.1
ENST00000683356.1
ENST00000683592.1
ENST00000683922.1
ENST00000684186.1
ENST00000684276.1
ENST00000684374.1
ENST00000684382.1
ENST00000684410.1
CDS TCA 90 bp AGGGCACTTAGAAGGCAATGGAGCCAGAACTTGAGCCTAAGTTTGTaGCTCATGGATTCAAGCATTTCTGAGGTCACAAAGATAAGGAGG +
Preference number: 5 (lower is better)
Translates to: RALRRQWSQNLSLSL*LMDSSISEVTKIRR
Trigger: CCTCCTTATCTTTGTGACCTCAGAAATGCTTGAATCCATGAGTCACAAACTTAGGCTCAAGTTCTGGCTCCATTGCCTTCTAAGTGCCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477496.5
CDS TCA 90 bp CATTTAGAAGTCATGTTTACTCTTCTCACTTGGAATAACCTACAGTaGGGAAGGGGCTGCACTGTGCAAGGAGGAGCTTCCATTTTGCTG +
Preference number: 5 (lower is better)
Translates to: HLEVMFTLLTWNNLQ*GRGCTVQGGASILL
Trigger: CAGCAAAATGGAAGCTCCTCCTTGCACAGTGCAGCCCCTTCCTCACTGTAGGTTATTCCAAGTGAGAAGAGTAAACATGACTTCTAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000682861.1
CDS TCA 90 bp CTTTCTGGTTGTGTGACCCTGGGTAAATTATTCAACCTCTTGGAGTaGCGTTTTCCTCATCTTGTCACTGTCCACTGTGTTCTGAGAGGT +
Preference number: 5 (lower is better)
Translates to: LSGCVTLGKLFNLLE*RFPHLVTVHCVLRG
Trigger: ACCTCTCAGAACACAGTGGACAGTGACAAGATGAGGAAAACGTCACTCCAAGAGGTTGAATAATTTACCCAGGGTCACACAACCAGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682575.1
CDS TCA 90 bp CATTTAGAAGTCATGTTTACTCTTCTCACTTGGAATAACCTACAGTaGGGAAGGGGCTGCACTGTGCAAGGAGGAGCTTCCATTTTGCTC +
Preference number: 5 (lower is better)
Translates to: HLEVMFTLLTWNNLQ*GRGCTVQGGASILL
Trigger: GAGCAAAATGGAAGCTCCTCCTTGCACAGTGCAGCCCCTTCCTCACTGTAGGTTATTCCAAGTGAGAAGAGTAAACATGACTTCTAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683428.1
CDS TCA 90 bp ACTGGCTTTGTAGCTTGCTTCTTAATCAGTATAATAAGGCAAAGGTaGTGGGAGATCACTTCTGTGGCTAGGCTATGTGCGACTGTGGCT +
Preference number: 5 (lower is better)
Translates to: TGFVACFLISIIRQR*WEITSVARLCATVA
Trigger: AGCCACAGTCGCACATAGCCTAGCCACAGAAGTGATCTCCCATCACCTTTGCCTTATTATACTGATTAAGAAGCAAGCTACAAAGCCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683280.1
CDS TCA 90 bp TGTGGCAAGGAGACTCTGGGGAGGCCCCCAATGATCCTCTCTCCTTaGGTATATACTGGCTTTGTAGCTTGCTTCTTAATCAGTATAATA +
Preference number: 5 (lower is better)
Translates to: CGKETLGRPPMILSP*VYTGFVACFLISII
Trigger: TATTATACTGATTAAGAAGCAAGCTACAAAGCCAGTATATACTCAAGGAGAGAGGATCATTGGGGGCCTCCCCAGAGTCTCCTTGCCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000683280.1
CDS GCA 90 bp ATATCCACAGGCTCCAGCAAGCATCTATTCCACCTAGACTTTCAATaGCTCATTAGGAAGACTGGGACCTGTCTTCTAACATTGAGAGGT +
Preference number: 5 (lower is better)
Translates to: ISTGSSKHLFHLDFQ*LIRKTGTCLLTLRG
Trigger: ACCTCTCAATGTTAGAAGACAGGTCCCAGTCTTCCTAATGAGGCATTGAAAGTCTAGGTGGAATAGATGCTTGCTGGAGCCTGTGGATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682625.1
CDS-3UTR CAA 90 bp TATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAAACAGTGAAGCCACGTTaGCACACGTCCTCACTTGGC +
Preference number: 5 (lower is better)
Translates to: YLQSHSVLLWFTLHVYVKTVKPR*HTSSLG
Trigger: GCCAAGTGAGGACGTGTGCAAACGTGGCTTCACTGT...TTTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp TCTGTTAGGGTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAATTGATGAGGTCCCACTaGGAGCCCCGCATGTCGATG +
Preference number: 5 (lower is better)
Translates to: SVRVMYQVLFHGFKKDLELMRSH*EPRMSM
Trigger: CATCGACATGCGGGGCTCCAAGTGGGACCTCATCAA...TTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCACCCTAACAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp TCTGTTAGGGTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACCTTCACTGCACATCTaGCACCAGGCATCCACTCCC +
Preference number: 5 (lower is better)
Translates to: SVRVMYQVLFHGFKKDLEPSLHI*HQASTP
Trigger: GGGAGTGGATGCCTGGTGCAAGATGTGCAGTGAAGG...TTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCACCCTAACAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp TATACACCAGAAAGCAGCATTGGCCTCAAAGTACAATTAGTCCTTTTAGTTCAGTCTGGTGGTGGTGGATaGCCAGCTCTAGGTCTTGCA +
Preference number: 5 (lower is better)
Translates to: YTPESSIGLKVQLVLLVQSGGGG*PALGLA
Trigger: TGCAAGACCTAGAGCTGGCAATCCACCACCACCAGA...CTGAACTAAAAGGACTAATTGTACTTTGAGGCCAATGCTGCTTTCTGGTGTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp ACAGATAAAGAAACCGAAGCTCACACAAGACCACAAAGCAAGATTTTGCTGAGTCCAACTCCAGTGTGTTaGCTGAGAAAGGCCTCACCA +
Preference number: 5 (lower is better)
Translates to: TDKETEAHTRPQSKILLSPTPVC*LRKASP
Trigger: TGGTGAGGCCTTTCTCAGCAAACACACTGGAGTTGG...ACTCAGCAAAATCTTGCTTTGTGGTCTTGTGTGAGCTTCGGTTTCTTTATCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439170.2
CDS-3UTR CAA 90 bp ACAGATAAAGAAACCGAAGCTCACACAAGACCACAAAGCAAGATTTTGCTGAGTGCTGCTTCTAGGAGCTaGTCCGCATTGGTGTACGTA +
Preference number: 5 (lower is better)
Translates to: TDKETEAHTRPQSKILLSAASRS*SALVYV
Trigger: TACGTACACCAATGCGGACAAGCTCCTAGAAGCAGC...ACTCAGCAAAATCTTGCTTTGTGGTCTTGTGTGAGCTTCGGTTTCTTTATCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439170.2
CDS-3UTR CAA 90 bp GCCAGTGTTTGGGAAAGGCTAAAGTTAACCCTCATCTTCTCTACCACACATCATCCTTCCTTGATGACATaGAGTGTGGCATCTAGAGTG +
Preference number: 5 (lower is better)
Translates to: ASVWERLKLTLIFSTTHHPSLMT*SVASRV
Trigger: CACTCTAGATGCCACACTCAATGTCATCAAGGAAGG...ATGATGTGTGGTAGAGAAGATGAGGGTTAACTTTAGCCTTTCCCAAACACTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CAA 90 bp CAGCAATTCTCAGTCATGCAAATGCCCGTGTTAAAGTTCTCCATTGGATTTAAATGGGGTGTTTTGTTGTaGGACACAGCCGAGTCCCTG +
Preference number: 5 (lower is better)
Translates to: QQFSVMQMPVLKFSIGFKWGVLL*DTAESL
Trigger: CAGGGACTCGGCTGTGTCCAACAACAAAACACCCCA...TTTAAATCCAATGGAGAACTTTAACACGGGCATTTGCATGACTGAGAATTGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CAA 90 bp TATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAATGGGGTGTTTTGTTGTaGGACACAGCCGAGTCCCTG +
Preference number: 5 (lower is better)
Translates to: YLQSHSVLLWFTLHVYVKWGVLL*DTAESL
Trigger: CAGGGACTCGGCTGTGTCCAACAACAAAACACCCCA...TTTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp CTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTCATACCTCAAAGGTCATGTaGTTCATGGCTAGCTTCCGT +
Preference number: 5 (lower is better)
Translates to: LSFQNNSELPVNLRGAFHTSKVM*FMASFR
Trigger: ACGGAAGCTAGCCATGAACAACATGACCTTTGAGGT...ATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp TCTGTTAGGGTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAAGACAAAGAGCTGGCATaGACCAGGCTGGCGTTGAGC +
Preference number: 5 (lower is better)
Translates to: SVRVMYQVLFHGFKKDLEDKELA*TRLALS
Trigger: GCTCAACGCCAGCCTGGTCAATGCCAGCTCTTTGTC...TTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCACCCTAACAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp CTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTCATAAATTCACCTGTTTCTaGGATCCAGTCAAGCGCCTG +
Preference number: 5 (lower is better)
Translates to: LSFQNNSELPVNLRGAFHKFTCF*DPVKRL
Trigger: CAGGCGCTTGACTGGATCCAAGAAACAGGTGAATTT...ATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp TACAAAGACAGTCCTTTCCTGAGCCAGGTGCAATTCCAGAGAATGACACTTTGCCAGTGGAGGTATGTGTaGAGAGGTAAAATTCACCTG +
Preference number: 5 (lower is better)
Translates to: YKDSPFLSQVQFQRMTLCQWRYV*RGKIHL
Trigger: CAGGTGAATTTTACCTCTCAACACATACCTCCACTG...GCAAAGTGTCATTCTCTGGAATTGCACCTGGCTCAGGAAAGGACTGTCTTTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CAA 90 bp CAGCAATTCTCAGTCATGCAAATGCCCGTGTTAAAGTTCTCCATTGGATTTAAAGCTTCACCTTCTCCTTaGTTTGCTTGGCAGGCACCC +
Preference number: 5 (lower is better)
Translates to: QQFSVMQMPVLKFSIGFKASPSP*FAWQAP
Trigger: GGGTGCCTGCCAAGCAAACAAAGGAGAAGGTGAAGC...TTTAAATCCAATGGAGAACTTTAACACGGGCATTTGCATGACTGAGAATTGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CAA 90 bp TATACACCAGAAAGCAGCATTGGCCTCAAAGTACAATTAGTCCTTTTAGTTCAGCACATCCTCAGGCAGTaGCTCGTACTTCTCCAGCTC +
Preference number: 5 (lower is better)
Translates to: YTPESSIGLKVQLVLLVQHILRQ*LVLLQL
Trigger: GAGCTGGAGAAGTACGAGCAACTGCCTGAGGATGTG...CTGAACTAAAAGGACTAATTGTACTTTGAGGCCAATGCTGCTTTCTGGTGTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp TTATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAACACATCCTCAGGCAGTaGCTCGTACTTCTCCAGCTC +
Preference number: 5 (lower is better)
Translates to: LFTVTFSLALVHTARLCEHILRQ*LVLLQL
Trigger: GAGCTGGAGAAGTACGAGCAACTGCCTGAGGATGTG...TTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp GCCAGTGTTTGGGAAAGGCTAAAGTTAACCCTCATCTTCTCTACCACACATCATCAGACCATGCCGCTGTaGTATCTCATCAAAGAAGGT +
Preference number: 5 (lower is better)
Translates to: ASVWERLKLTLIFSTTHHQTMPL*YLIKEG
Trigger: ACCTTCTTTGATGAGATACAACAGCGGCATGGTCTG...ATGATGTGTGGTAGAGAAGATGAGGGTTAACTTTAGCCTTTCCCAAACACTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CAA 90 bp CTGACGAGGTTTAAGAGGTACATCTCTCAATTCAGAGAACTGCACGGAGTGAAACAGACCATGCCGCTGTaGTATCTCATCAAAGAAGGT +
Preference number: 5 (lower is better)
Translates to: LTRFKRYISQFRELHGVKQTMPL*YLIKEG
Trigger: ACCTTCTTTGATGAGATACAACAGCGGCATGGTCTG...TTTCACTCCGTGCAGTTCTCTGAATTGAGAGATGTACCTCTTAAACCTCGTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp CTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTCATCAGACCATGCCGCTGTaGTATCTCATCAAAGAAGGT +
Preference number: 5 (lower is better)
Translates to: LSFQNNSELPVNLRGAFHQTMPL*YLIKEG
Trigger: ACCTTCTTTGATGAGATACAACAGCGGCATGGTCTG...ATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp CTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTCATTTGATCCACTCCTGCTaGGTTTCAATGTTGGAGGCT +
Preference number: 5 (lower is better)
Translates to: LSFQNNSELPVNLRGAFHLIHSC*VSMLEA
Trigger: AGCCTCCAACATTGAAACCAAGCAGGAGTGGATCAA...ATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp CTGACGAGGTTTAAGAGGTACATCTCTCAATTCAGAGAACTGCACGGAGTGAAATGCCTCCATTCTCGCTaGAGGAATGAGAGTATGCAT +
Preference number: 5 (lower is better)
Translates to: LTRFKRYISQFRELHGVKCLHSR*RNESMH
Trigger: ATGCATACTCTCATTCCTCAAGCGAGAATGGAGGCA...TTTCACTCCGTGCAGTTCTCTGAATTGAGAGATGTACCTCTTAAACCTCGTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp TATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAACACTTCTTAAGAGTGTaGGTGGAGCGCTTGGGACCC +
Preference number: 5 (lower is better)
Translates to: YLQSHSVLLWFTLHVYVKHFLRV*VERLGP
Trigger: GGGTCCCAAGCGCTCCACCAACACTCTTAAGAAGTG...TTTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp TATACACCAGAAAGCAGCATTGGCCTCAAAGTACAATTAGTCCTTTTAGTTCAGGTTTCATCCCCAGGCTaGGGAGATCCCAGGTCAAAG +
Preference number: 5 (lower is better)
Translates to: YTPESSIGLKVQLVLLVQVSSPG*GDPRSK
Trigger: CTTTGACCTGGGATCTCCCAAGCCTGGGGATGAAAC...CTGAACTAAAAGGACTAATTGTACTTTGAGGCCAATGCTGCTTTCTGGTGTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp TCTGTTAGGGTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAATGTCTCCCTGAGGGGTaGTTTCATCCCCAGGCTTGG +
Preference number: 5 (lower is better)
Translates to: SVRVMYQVLFHGFKKDLECLPEG*FHPQAW
Trigger: CCAAGCCTGGGGATGAAACAACCCCTCAGGGAGACA...TTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCACCCTAACAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp GGCAGGCTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGAGACTCAGCTTGTTTTaGACCAACTTTTCTATTGCA +
Preference number: 5 (lower is better)
Translates to: GRLSFQNNSELPVNLRGARLSLF*TNFSIA
Trigger: TGCAATAGAAAAGTTGGTCAAAAACAAGCTGAGTCT...CGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAGCCTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp CTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTCATCTGTGCCAATCTGTCTaGCTCCTGGATACACTTTTC +
Preference number: 5 (lower is better)
Translates to: LSFQNNSELPVNLRGAFHLCQSV*LLDTLF
Trigger: GAAAAGTGTATCCAGGAGCAAGACAGATTGGCACAG...ATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp ATCAATTGTTACAAGCCTGATGGAAGTATGTACTTATATGTATATGTGCGATGGAACACGCGCCTCTCTTaGGTCCGGGACTGCATGCCT +
Preference number: 5 (lower is better)
Translates to: INCYKPDGSMYLYVYVRWNTRLS*VRDCMP
Trigger: AGGCATGCAGTCCCGGACCAAAGAGAGGCGCGTGTT...CCATCGCACATATACATATAAGTACATACTTCCATCAGGCTTGTAACAATTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR CAA 90 bp CTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTCATGCTCCTTTCTTTCCGTaGATACTCAATGGGCGATTG +
Preference number: 5 (lower is better)
Translates to: LSFQNNSELPVNLRGAFHAPFFP*ILNGRL
Trigger: CAATCGCCCATTGAGTATCAACGGAAAGAAAGGAGC...ATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp TATACACCAGAAAGCAGCATTGGCCTCAAAGTACAATTAGTCCTTTTAGTTCAGTTGCTGGCTTCGAACTaGTCCCCAGGCTGGTGGTAT +
Preference number: 5 (lower is better)
Translates to: YTPESSIGLKVQLVLLVQLLASN*SPGWWY
Trigger: ATACCACCAGCCTGGGGACAAGTTCGAAGCCAGCAA...CTGAACTAAAAGGACTAATTGTACTTTGAGGCCAATGCTGCTTTCTGGTGTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp GTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACCAGGCCTTTTGCCCAGAATATCCTaGGGTTTACGAGGCCCTGTG +
Preference number: 5 (lower is better)
Translates to: VMYQVLFHGFKKDLEPGLLPRIS*GLRGPV
Trigger: CACAGGGCCTCGTAAACCCAAGGATATTCTGGGCAA...AAGGCCTGGTTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp GTAAAAGCTGATATGAAAGCTTGGGGTCTGTCTAACATTCTGTCAACTGCCCCCTGGTCCCGTGGTCATTaGTTGCTATGCAGGTATAAA +
Preference number: 5 (lower is better)
Translates to: VKADMKAWGLSNILSTAPWSRGH*LLCRYK
Trigger: TTTATACCTGCATAGCAACAAATGACCACGGGACCA...GGGGGCAGTTGACAGAATGTTAGACAGACCCCAAGCTTTCATATCAGCTTTTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR CAA 90 bp CTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTCATGGAACACCTTGCACTTaGACTGTTGCAGACGTTGAT +
Preference number: 5 (lower is better)
Translates to: LSFQNNSELPVNLRGAFHGTPCT*TVADVD
Trigger: ATCAACGTCTGCAACAGTCAAAGTGCAAGGTGTTCC...ATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp CTGACGAGGTTTAAGAGGTACATCTCTCAATTCAGAGAACTGCACGGAGTGAAAATACATGTCTCCTCTTaGCTCTCATCCAAGAAGGGG +
Preference number: 5 (lower is better)
Translates to: LTRFKRYISQFRELHGVKIHVSS*LSSKKG
Trigger: CCCCTTCTTGGATGAGAGCAAAGAGGAGACATGTAT...TTTCACTCCGTGCAGTTCTCTGAATTGAGAGATGTACCTCTTAAACCTCGTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp AAGGAAGAAGGTCTACATTCCTCGAAACTCATCCAGCACAATTCATTGACCATAAGATGGCTACGTCCCTaGGTTCACCCGGTTGACAAT +
Preference number: 5 (lower is better)
Translates to: KEEGLHSSKLIQHNSLTIRWLRP*VHPVDN
Trigger: ATTGTCAACCGGGTGAACCAAGGGACGTAGCCATCT...TATGGTCAATGAATTGTGCTGGATGAGTTTCGAGGAATGTAGACCTTCTTCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR CAA 90 bp GCTCCCTCATATTCTCACAAATCTAAATTGCCATGCTCTTCCACAGAGGCAAGACTCAGAGCCTACAGTTaGTCCCATGACAAACCCTAT +
Preference number: 5 (lower is better)
Translates to: APSYSHKSKLPCSSTEARLRAYS*SHDKPY
Trigger: ATAGGGTTTGTCATGGGACAAACTGTAGGCTCTGAG...TCTTGCCTCTGTGGAAGAGCATGGCAATTTAGATTTGTGAGAATATGAGGGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR CAA 90 bp CCCAGGATCATCATCATCTGGGATTCCTTGTTATTTCCAACTTGCTGTGGAGAACCCAAATATGTGTACTaGGGGGAATTCCATGCAACC +
Preference number: 5 (lower is better)
Translates to: PRIIIIWDSLLFPTCCGEPKYVY*GEFHAT
Trigger: GGTTGCATGGAATTCCCCCAAGTACACATATTTGGG...TTCTCCACAGCAAGTTGGAAATAACAAGGAATCCCAGATGATGATGATCCTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR CAA 90 bp GTAAAAGCTGATATGAAAGCTTGGGGTCTGTCTAACATTCTGTCAACTGCCCCCTGCTGTGGAGAACTCTaGAACCAAGACTACTCTCTT +
Preference number: 5 (lower is better)
Translates to: VKADMKAWGLSNILSTAPCCGEL*NQDYSL
Trigger: AAGAGAGTAGTCTTGGTTCAAGAGTTCTCCACAGCA...GGGGGCAGTTGACAGAATGTTAGACAGACCCCAAGCTTTCATATCAGCTTTTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR CAA 90 bp TCAGGTATTGATGGAAACTCATATGATGGCCATCCCTGGGCCAACAAATTAGCTCTACTCCCCCTTACATaGTTTATGGCTGAGAGAGAC +
Preference number: 5 (lower is better)
Translates to: SGIDGNSYDGHPWANKLALLPLT*FMAERD
Trigger: GTCTCTCTCAGCCATAAACAATGTAAGGGGGAGTAG...AGCTAATTTGTTGGCCCAGGGATGGCCATCATATGAGTTTCCATCAATACCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS TCA 90 bp TGCTTCTACCTCCATGCTAGTATTAGGGTCAAGATCATCACACTCTaGTTCCTCGGAACTGTTCGTCTCTTTAACAGAGACTTTGTTGCC +
Preference number: 5 (lower is better)
Translates to: CFYLHASIRVKIITL*FLGTVRLFNRDFVA
Trigger: GGCAACAAAGTCTCTGTTAAAGAGACGAACAGTTCCGAGGAATCAGAGTGTGATGATCTTGACCCTAATACTAGCATGGAGGTAGAAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462213.2
CDS TCA 90 bp CTGGGATGGGATACCCAGAGATGCCCCAACATCACAATTTATCTTTaGATGGCTGGTCATTTTAGCAAGGTCACTGTTACAGAACACATC +
Preference number: 5 (lower is better)
Translates to: LGWDTQRCPNITIYL*MAGHFSKVTVTEHI
Trigger: GATGTGTTCTGTAACAGTGACCTTGCTAAAATGACCAGCCATTCAAAGATAAATTGTGATGTTGGGGCATCTCTGGGTATCCCATCCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462213.2
CDS GCA 90 bp CCAGGAATCCAAGATAACGGAATTAAAGACTGCTTGGTTATTCTCTaGAGAGTATGCCAAGGTTTCTCACCCACCCATTGTAGGACAAGA +
Preference number: 5 (lower is better)
Translates to: PGIQDNGIKDCLVIL*RVCQGFSPTHCRTR
Trigger: TCTTGTCCTACAATGGGTGGGTGAGAAACCTTGGCATACTCTGCAGAGAATAACCAAGCAGTCTTTAATTCCGTTATCTTGGATTCCTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684410.1
CDS GCA 90 bp CCAAAGCAAGCTGAGGCCAAACAACCTCCTGGGACACAGGTCAATTaGTTTTCTGGGAATATGAAGGAAAGTCAAGGTTTATCTAGAAAG +
Preference number: 5 (lower is better)
Translates to: PKQAEAKQPPGTQVN*FSGNMKESQGLSRK
Trigger: CTTTCTAGATAAACCTTGACTTTCCTTCATATTCCCAGAAAAGCAATTGACCTGTGTCCCAGGAGGTTGTTTGGCCTCAGCTTGCTTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000683280.1
ENST00000683428.1
CDS-3UTR CAA 90 bp CATTTTAGACTTTGGAGAGAAGCTCAGCAACCTCGAATTGCACCCAGTAGAGAATGGAGGAATAACTCCTaGTTGTGGCTTATCCAGTCA +
Preference number: 5 (lower is better)
Translates to: HFRLWREAQQPRIAPSREWRNNS*LWLIQS
Trigger: TGACTGGATAAGCCACAACAAGGAGTTATTCCTCCA...TTCTCTACTGGGTGCAATTCGAGGTTGCTGAGCTTCTCTCCAAAGTCTAAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CAA 90 bp CTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTCATTGGAGGAATAACTCCTaGTTGTGGCTTATCCAGTCA +
Preference number: 5 (lower is better)
Translates to: LSFQNNSELPVNLRGAFHWRNNS*LWLIQS
Trigger: TGACTGGATAAGCCACAACAAGGAGTTATTCCTCCA...ATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp TCTGTTAGGGTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAATCTGGTGGTGGTGGATaGCCAGCTCTAGGTCTTGCA +
Preference number: 5 (lower is better)
Translates to: SVRVMYQVLFHGFKKDLESGGGG*PALGLA
Trigger: TGCAAGACCTAGAGCTGGCAATCCACCACCACCAGA...TTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCACCCTAACAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp TATACACCAGAAAGCAGCATTGGCCTCAAAGTACAATTAGTCCTTTTAGTTCAGGACCTCTGTGTAGGCTaGGGTCACCTGCTCATACAA +
Preference number: 5 (lower is better)
Translates to: YTPESSIGLKVQLVLLVQDLCVG*GHLLIQ
Trigger: TTGTATGAGCAGGTGACCCAAGCCTACACAGAGGTC...CTGAACTAAAAGGACTAATTGTACTTTGAGGCCAATGCTGCTTTCTGGTGTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp TATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAACCAACTCCAGTGTGTTaGCTGAGAAAGGCCTCACCA +
Preference number: 5 (lower is better)
Translates to: YLQSHSVLLWFTLHVYVKPTPVC*LRKASP
Trigger: TGGTGAGGCCTTTCTCAGCAAACACACTGGAGTTGG...TTTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp TTATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAACCAACTCCAGTGTGTTaGCTGAGAAAGGCCTCACCA +
Preference number: 5 (lower is better)
Translates to: LFTVTFSLALVHTARLCEPTPVC*LRKASP
Trigger: TGGTGAGGCCTTTCTCAGCAAACACACTGGAGTTGG...TTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp GATAAAGAAACCGAAGCTCACACAAGACCACAAAGCAAGATTTTGCTGAGTCAAAGGTCTTCGCCTTCCTaGATGACATTGAGTGTGGCA +
Preference number: 5 (lower is better)
Translates to: DKETEAHTRPQSKILLSQRSSPS*MTLSVA
Trigger: TGCCACACTCAATGTCATCAAGGAAGGCGAAGACCT...TTGACTCAGCAAAATCTTGCTTTGTGGTCTTGTGTGAGCTTCGGTTTCTTTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439170.2
CDS-3UTR CAA 90 bp TCTGTTAGGGTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACTGCTGTGGGGTGTTTaGTTGTTGGACACAGCCGAG +
Preference number: 5 (lower is better)
Translates to: SVRVMYQVLFHGFKKDLELLWGV*LLDTAE
Trigger: CTCGGCTGTGTCCAACAACAAAACACCCCACAGCAG...TTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCACCCTAACAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp TATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAAAGGAAGATGTCCAGCTaGATCTTCCGCTCGTGGAAC +
Preference number: 5 (lower is better)
Translates to: YLQSHSVLLWFTLHVYVKRKMSS*IFRSWN
Trigger: GTTCCACGAGCGGAAGATCAAGCTGGACATCTTCCT...TTTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp TTATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAAGGAAGATGTCCAGCTaGATCTTCCGCTCGTGGAAC +
Preference number: 5 (lower is better)
Translates to: LFTVTFSLALVHTARLCERKMSS*IFRSWN
Trigger: GTTCCACGAGCGGAAGATCAAGCTGGACATCTTCCT...TTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp TATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAAAGCATTGACTCTCCATaGCGGATCCATCCCAGAACC +
Preference number: 5 (lower is better)
Translates to: YLQSHSVLLWFTLHVYVKSIDSP*RIHPRT
Trigger: GGTTCTGGGATGGATCCGCAATGGAGAGTCAATGCT...TTTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp TTATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAATTGACCAGGCTGGCGTaGAGCATTGACTCTCCATTG +
Preference number: 5 (lower is better)
Translates to: LFTVTFSLALVHTARLCELTRLA*SIDSPL
Trigger: CAATGGAGAGTCAATGCTCAACGCCAGCCTGGTCAA...TTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp GTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACCAGGCCTTAAGGCCACAGAGGCATaGACCAATTTTAGCCGGTCT +
Preference number: 5 (lower is better)
Translates to: VMYQVLFHGFKKDLEPGLKATEA*TNFSRS
Trigger: AGACCGGCTAAAATTGGTCAATGCCTCTGTGGCCTT...AAGGCCTGGTTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp CTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTCATCAGTGGAGGTATGTGTaGAGAGGTAAAATTCACCTG +
Preference number: 5 (lower is better)
Translates to: LSFQNNSELPVNLRGAFHQWRYV*RGKIHL
Trigger: CAGGTGAATTTTACCTCTCAACACATACCTCCACTG...ATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp TTATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAACACCTTCTCCTTTGTTaGCTTGGCAGGCACCCTGAA +
Preference number: 5 (lower is better)
Translates to: LFTVTFSLALVHTARLCEHLLLC*LGRHPE
Trigger: TTCAGGGTGCCTGCCAAGCAAACAAAGGAGAAGGTG...TTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp TCTGTTAGGGTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAAGCTTCACCTTCTCCTTaGTTTGCTTGGCAGGCACCC +
Preference number: 5 (lower is better)
Translates to: SVRVMYQVLFHGFKKDLEASPSP*FAWQAP
Trigger: GGGTGCCTGCCAAGCAAACAAAGGAGAAGGTGAAGC...TTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCACCCTAACAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp TTATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAATTCCGCTTCTCTTCATaGACTTCGTGGTTGGCGTCC +
Preference number: 5 (lower is better)
Translates to: LFTVTFSLALVHTARLCEFRFSS*TSWLAS
Trigger: GGACGCCAACCACGAAGTCAATGAAGAGAAGCGGAA...TTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp TATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAATTCCGCTTCTCTTCATaGACTTCGTGGTTGGCGTCC +
Preference number: 5 (lower is better)
Translates to: YLQSHSVLLWFTLHVYVKFRFSS*TSWLAS
Trigger: GGACGCCAACCACGAAGTCAATGAAGAGAAGCGGAA...TTTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp TATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAACTTCGGGTCCCACACTaGAAAGGCATCCTGGAGAAT +
Preference number: 5 (lower is better)
Translates to: YLQSHSVLLWFTLHVYVKLRVPH*KGILEN
Trigger: ATTCTCCAGGATGCCTTTCAAGTGTGGGACCCGAAG...TTTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp CATTTTAGACTTTGGAGAGAAGCTCAGCAACCTCGAATTGCACCCAGTAGAGAATGCTTGGTTTCAATGTaGGAGGCTTTCAGCACTGTT +
Preference number: 5 (lower is better)
Translates to: HFRLWREAQQPRIAPSRECLVSM*EAFSTV
Trigger: AACAGTGCTGAAAGCCTCCAACATTGAAACCAAGCA...TTCTCTACTGGGTGCAATTCGAGGTTGCTGAGCTTCTCTCCAAAGTCTAAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CAA 90 bp AAACTCTGTGTTTGGGGTTGGGGCTCTCTCTTGAGTGTGTTGGAAACTGGAGGAGTGAATGATCCTTTCTaGAATCACTTCTCGAATGTT +
Preference number: 5 (lower is better)
Translates to: KLCVWGWGSLLSVLETGGVNDPF*NHFSNV
Trigger: AACATTCGAGAAGTGATTCAAGAAAGGATCATTCAC...TCCTCCAGTTTCCAACACACTCAAGAGAGAGCCCCAACCCCAAACACAGAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CAA 90 bp TTATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAATCACCCCAACCTTTCTaGCTCTTCTCATCAGCGCTG +
Preference number: 5 (lower is better)
Translates to: LFTVTFSLALVHTARLCESPQPF*LFSSAL
Trigger: CAGCGCTGATGAGAAGAGCAAGAAAGGTTGGGGTGA...TTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp TCAGGTCATCCACAGTGGACAGAACAGAACTTGCCAAGCTGGACTTTATGGATATCCTGTGTAGGGTCGTaGTCAAAAATCTTCATAGGT +
Preference number: 5 (lower is better)
Translates to: SGHPQWTEQNLPSWTLWISCVGS*SKIFIG
Trigger: ACCTATGAAGATTTTTGACAACGACCCTACACAGGA...TATCCATAAAGTCCAGCTTGGCAAGTTCTGTTCTGTCCACTGTGGATGACCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR CAA 90 bp ATTCAGGTCATCCACAGTGGACAGAACAGAACTTGCCAAGCTGGACTTTATGGATATCTCAGGAAGTCCTaGAGGAGCAACTGGTATTTT +
Preference number: 5 (lower is better)
Translates to: IQVIHSGQNRTCQAGLYGYLRKS*RSNWYF
Trigger: AAAATACCAGTTGCTCCTCAAGGACTTCCTGAGATA...TCCATAAAGTCCAGCTTGGCAAGTTCTGTTCTGTCCACTGTGGATGACCTGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR CAA 90 bp CTGACGAGGTTTAAGAGGTACATCTCTCAATTCAGAGAACTGCACGGAGTGAAAATGTCATTGCAGCGTTaGGGAACAAGGCACATTAAC +
Preference number: 5 (lower is better)
Translates to: LTRFKRYISQFRELHGVKMSLQR*GTRHIN
Trigger: GTTAATGTGCCTTGTTCCCAAACGCTGCAATGACAT...TTTCACTCCGTGCAGTTCTCTGAATTGAGAGATGTACCTCTTAAACCTCGTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp CTGACGAGGTTTAAGAGGTACATCTCTCAATTCAGAGAACTGCACGGAGTGAAAAGATTCATCATGTCATaGCAGCGTTTGGGAACAAGG +
Preference number: 5 (lower is better)
Translates to: LTRFKRYISQFRELHGVKRFIMS*QRLGTR
Trigger: CCTTGTTCCCAAACGCTGCAATGACATGATGAATCT...TTTCACTCCGTGCAGTTCTCTGAATTGAGAGATGTACCTCTTAAACCTCGTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp GTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACCAGGCCTTAACTTGCAGGGATCATaGTCCACATTCTCCTCCAGG +
Preference number: 5 (lower is better)
Translates to: VMYQVLFHGFKKDLEPGLNLQGS*STFSSR
Trigger: CCTGGAGGAGAATGTGGACAATGATCCCTGCAAGTT...AAGGCCTGGTTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp TCTGTTAGGGTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAATTGCTGGCTTCGAACTaGTCCCCAGGCTGGTGGTAT +
Preference number: 5 (lower is better)
Translates to: SVRVMYQVLFHGFKKDLELLASN*SPGWWY
Trigger: ATACCACCAGCCTGGGGACAAGTTCGAAGCCAGCAA...TTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCACCCTAACAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp TTATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAATTGCCCAGAATATCCTaGGGTTTACGAGGCCCTGTG +
Preference number: 5 (lower is better)
Translates to: LFTVTFSLALVHTARLCELPRIS*GLRGPV
Trigger: CACAGGGCCTCGTAAACCCAAGGATATTCTGGGCAA...TTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp CTGACGAGGTTTAAGAGGTACATCTCTCAATTCAGAGAACTGCACGGAGTGAAATCCCGTGGTCATTTGTaGCTATGCAGGTATAAATCC +
Preference number: 5 (lower is better)
Translates to: LTRFKRYISQFRELHGVKSRGHL*LCRYKS
Trigger: GGATTTATACCTGCATAGCAACAAATGACCACGGGA...TTTCACTCCGTGCAGTTCTCTGAATTGAGAGATGTACCTCTTAAACCTCGTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp TTATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAGGCTGCTGGAACACCTaGCACTTTGACTGTTGCAGA +
Preference number: 5 (lower is better)
Translates to: LFTVTFSLALVHTARLCEGCWNT*HFDCCR
Trigger: TCTGCAACAGTCAAAGTGCAAGGTGTTCCAGCAGCC...TTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp TATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAAAGATGGCTACGTCCCTaGGTTCACCCGGTTGACAAT +
Preference number: 5 (lower is better)
Translates to: YLQSHSVLLWFTLHVYVKRWLRP*VHPVDN
Trigger: ATTGTCAACCGGGTGAACCAAGGGACGTAGCCATCT...TTTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp TTATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAAGATGGCTACGTCCCTaGGTTCACCCGGTTGACAAT +
Preference number: 5 (lower is better)
Translates to: LFTVTFSLALVHTARLCERWLRP*VHPVDN
Trigger: ATTGTCAACCGGGTGAACCAAGGGACGTAGCCATCT...TTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp ATTCAGGTCATCCACAGTGGACAGAACAGAACTTGCCAAGCTGGACTTTATGGAGAAAGTGTTGGTACGTaGTTCATAGGAACTGTAGGA +
Preference number: 5 (lower is better)
Translates to: IQVIHSGQNRTCQAGLYGESVGT*FIGTVG
Trigger: TCCTACAGTTCCTATGAACAACGTACCAACACTTTC...TCCATAAAGTCCAGCTTGGCAAGTTCTGTTCTGTCCACTGTGGATGACCTGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR CAA 90 bp CTGACGAGGTTTAAGAGGTACATCTCTCAATTCAGAGAACTGCACGGAGTGAAAGGGCGAATGAGGAAGTaGTCTTTGAAACCAATGGAA +
Preference number: 5 (lower is better)
Translates to: LTRFKRYISQFRELHGVKGRMRK*SLKPME
Trigger: TTCCATTGGTTTCAAAGACAACTTCCTCATTCGCCC...TTTCACTCCGTGCAGTTCTCTGAATTGAGAGATGTACCTCTTAAACCTCGTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR CAA 90 bp GTAAAAGCTGATATGAAAGCTTGGGGTCTGTCTAACATTCTGTCAACTGCCCCCTATCAATCTATAATCTaGGATGGGATGAGGTGGAGG +
Preference number: 5 (lower is better)
Translates to: VKADMKAWGLSNILSTAPYQSII*DGMRWR
Trigger: CCTCCACCTCATCCCATCCAAGATTATAGATTGATA...GGGGGCAGTTGACAGAATGTTAGACAGACCCCAAGCTTTCATATCAGCTTTTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR CAA 90 bp TCTGTTAGGGTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAATCAAAAATACCCTCCTaGTCCCCCACCTGCCGTGGT +
Preference number: 5 (lower is better)
Translates to: SVRVMYQVLFHGFKKDLESKIPS*SPTCRG
Trigger: ACCACGGCAGGTGGGGGACAAGGAGGGTATTTTTGA...TTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCACCCTAACAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR CAA 90 bp TATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAACATCCACCAGAGAGCTaGTCACTGTCCACTGTGTTC +
Preference number: 5 (lower is better)
Translates to: YLQSHSVLLWFTLHVYVKHPPES*SLSTVF
Trigger: GAACACAGTGGACAGTGACAAGCTCTCTGGTGGATG...TTTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS TCA 90 bp ACGCTTTCTAAGAGTTCCCAGATGATTCTAGCATACATTGAGAGGTaGGAACAGCTGGTTTCTGGTCCAGAATCCAAAACACTTTGTGGT +
Preference number: 5 (lower is better)
Translates to: TLSKSSQMILAYIER*EQLVSGPESKTLCG
Trigger: ACCACAAAGTGTTTTGGATTCTGGACCAGAAACCAGCTGTTCTCACCTCTCAATGTATGCTAGAATCATCTGGGAACTCTTAGAAAGCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000683280.1
ENST00000683428.1
CDS GCA 90 bp ATATCCACAGGCTCCAGCAAGCATCTATTCCACCTAGACTTTCAATaGCTCATTAGGAAGACTGGGACCTGTCTTCTAACCTATAAAAAG +
Preference number: 5 (lower is better)
Translates to: ISTGSSKHLFHLDFQ*LIRKTGTCLLTYKK
Trigger: CTTTTTATAGGTTAGAAGACAGGTCCCAGTCTTCCTAATGAGGCATTGAAAGTCTAGGTGGAATAGATGCTTGCTGGAGCCTGTGGATAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000682890.1
CDS GCA 90 bp CAAGATAACGGAATTAAAGACTGCTTGGTTATTCTCTGCAGAGTATaGCAAGGTTTCTCACCCACCCATTGTAGGACAAGAGAAAAGGTG +
Preference number: 5 (lower is better)
Translates to: QDNGIKDCLVILCRV*QGFSPTHCRTREKV
Trigger: CACCTTTTCTCTTGTCCTACAATGGGTGGGTGAGAAACCTTGGCATACTCTGCAGAGAATAACCAAGCAGTCTTTAATTCCGTTATCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684410.1
CDS-3UTR CAA 90 bp TATACACCAGAAAGCAGCATTGGCCTCAAAGTACAATTAGTCCTTTTAGTTCAGACATCAAGTAGTGCTTaGCCATCCTGGCTGACCTCT +
Preference number: 5 (lower is better)
Translates to: YTPESSIGLKVQLVLLVQTSSSA*PSWLTS
Trigger: AGAGGTCAGCCAGGATGGCAAAGCACTACTTGATGT...CTGAACTAAAAGGACTAATTGTACTTTGAGGCCAATGCTGCTTTCTGGTGTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp TCTGTTAGGGTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAAGCTGCTTCTAGGAGCTaGTCCGCATTGGTGTACGTA +
Preference number: 5 (lower is better)
Translates to: SVRVMYQVLFHGFKKDLEAASRS*SALVYV
Trigger: TACGTACACCAATGCGGACAAGCTCCTAGAAGCAGC...TTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCACCCTAACAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp GATAAAGAAACCGAAGCTCACACAAGACCACAAAGCAAGATTTTGCTGAGTCAACATGTCCACAACTCTTaGGTGTGTGTGTGGAAGGAA +
Preference number: 5 (lower is better)
Translates to: DKETEAHTRPQSKILLSQHVHNS*VCVWKE
Trigger: TTCCTTCCACACACACACCAAAGAGTTGTGGACATG...TTGACTCAGCAAAATCTTGCTTTGTGGTCTTGTGTGAGCTTCGGTTTCTTTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439170.2
CDS-3UTR CAA 90 bp GTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACCAGGCCTTCCTTCCTTGATGACATaGAGTGTGGCATCTAGAGTG +
Preference number: 5 (lower is better)
Translates to: VMYQVLFHGFKKDLEPGLPSLMT*SVASRV
Trigger: CACTCTAGATGCCACACTCAATGTCATCAAGGAAGG...AAGGCCTGGTTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp GATAAAGAAACCGAAGCTCACACAAGACCACAAAGCAAGATTTTGCTGAGTCAACCTTCCTTGATGACATaGAGTGTGGCATCTAGAGTG +
Preference number: 5 (lower is better)
Translates to: DKETEAHTRPQSKILLSQPSLMT*SVASRV
Trigger: CACTCTAGATGCCACACTCAATGTCATCAAGGAAGG...TTGACTCAGCAAAATCTTGCTTTGTGGTCTTGTGTGAGCTTCGGTTTCTTTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439170.2
CDS-3UTR CAA 90 bp TATACACCAGAAAGCAGCATTGGCCTCAAAGTACAATTAGTCCTTTTAGTTCAGAGGTCTTCGCCTTCCTaGATGACATTGAGTGTGGCA +
Preference number: 5 (lower is better)
Translates to: YTPESSIGLKVQLVLLVQRSSPS*MTLSVA
Trigger: TGCCACACTCAATGTCATCAAGGAAGGCGAAGACCT...CTGAACTAAAAGGACTAATTGTACTTTGAGGCCAATGCTGCTTTCTGGTGTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp TCTGTTAGGGTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAATTGACCAGGCTGGCGTaGAGCATTGACTCTCCATTG +
Preference number: 5 (lower is better)
Translates to: SVRVMYQVLFHGFKKDLELTRLA*SIDSPL
Trigger: CAATGGAGAGTCAATGCTCAACGCCAGCCTGGTCAA...TTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCACCCTAACAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp TACAAAGACAGTCCTTTCCTGAGCCAGGTGCAATTCCAGAGAATGACACTTTGCTTTTGTTCCAAATGTTaGCTGATGAGGGGAATGACA +
Preference number: 5 (lower is better)
Translates to: YKDSPFLSQVQFQRMTLCFCSKC*LMRGMT
Trigger: TGTCATTCCCCTCATCAGCAAACATTTGGAACAAAA...GCAAAGTGTCATTCTCTGGAATTGCACCTGGCTCAGGAAAGGACTGTCTTTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CAA 90 bp TATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAATTCTCCTTTGTTTGCTaGGCAGGCACCCTGAATTCC +
Preference number: 5 (lower is better)
Translates to: YLQSHSVLLWFTLHVYVKFSFVC*AGTLNS
Trigger: GGAATTCAGGGTGCCTGCCAAGCAAACAAAGGAGAA...TTTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp TCTGTTAGGGTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACACCTTCTCCTTTGTTaGCTTGGCAGGCACCCTGAA +
Preference number: 5 (lower is better)
Translates to: SVRVMYQVLFHGFKKDLEHLLLC*LGRHPE
Trigger: TTCAGGGTGCCTGCCAAGCAAACAAAGGAGAAGGTG...TTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCACCCTAACAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp CATTTTAGACTTTGGAGAGAAGCTCAGCAACCTCGAATTGCACCCAGTAGAGAATCCAGGATAAGCTGGTaGGAATCAGGCTTGTTTTTA +
Preference number: 5 (lower is better)
Translates to: HFRLWREAQQPRIAPSRESRISW*ESGLFL
Trigger: TAAAAACAAGCCTGATTCCAACCAGCTTATCCTGGA...TTCTCTACTGGGTGCAATTCGAGGTTGCTGAGCTTCTCTCCAAAGTCTAAAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CAA 90 bp CTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTCATTCCAGGATAAGCTGGTaGGAATCAGGCTTGTTTTTA +
Preference number: 5 (lower is better)
Translates to: LSFQNNSELPVNLRGAFHSRISW*ESGLFL
Trigger: TAAAAACAAGCCTGATTCCAACCAGCTTATCCTGGA...ATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp TACAAAGACAGTCCTTTCCTGAGCCAGGTGCAATTCCAGAGAATGACACTTTGCTGTCCTGAAGAATCTTaGATCTCCTTGCTAAAAACC +
Preference number: 5 (lower is better)
Translates to: YKDSPFLSQVQFQRMTLCCPEES*ISLLKT
Trigger: GGTTTTTAGCAAGGAGATCAAAGATTCTTCAGGACA...GCAAAGTGTCATTCTCTGGAATTGCACCTGGCTCAGGAAAGGACTGTCTTTGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CAA 90 bp TATACACCAGAAAGCAGCATTGGCCTCAAAGTACAATTAGTCCTTTTAGTTCAGTTCAGCACTGTTTTATaGTCTGAGGATGGGGTGCGC +
Preference number: 5 (lower is better)
Translates to: YTPESSIGLKVQLVLLVQFSTVL*SEDGVR
Trigger: GCGCACCCCATCCTCAGACAATAAAACAGTGCTGAA...CTGAACTAAAAGGACTAATTGTACTTTGAGGCCAATGCTGCTTTCTGGTGTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp CAGCAATTCTCAGTCATGCAAATGCCCGTGTTAAAGTTCTCCATTGGATTTAAAACAAGGTTGCCATCCTaGTCACTGTCCACTGTGTTC +
Preference number: 5 (lower is better)
Translates to: QQFSVMQMPVLKFSIGFKTRLPS*SLSTVF
Trigger: GAACACAGTGGACAGTGACAAGGATGGCAACCTTGT...TTTAAATCCAATGGAGAACTTTAACACGGGCATTTGCATGACTGAGAATTGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CAA 90 bp CAGCAATTCTCAGTCATGCAAATGCCCGTGTTAAAGTTCTCCATTGGATTTAAACTCAGCAACCTCGAATaGCACCCAGTAGAGAAGAAG +
Preference number: 5 (lower is better)
Translates to: QQFSVMQMPVLKFSIGFKLSNLE*HPVEKK
Trigger: CTTCTTCTCTACTGGGTGCAATTCGAGGTTGCTGAG...TTTAAATCCAATGGAGAACTTTAACACGGGCATTTGCATGACTGAGAATTGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CAA 90 bp AAGGAAGAAGGTCTACATTCCTCGAAACTCATCCAGCACAATTCATTGACCATATGCCTCCATTCTCGCTaGAGGAATGAGAGTATGCAT +
Preference number: 5 (lower is better)
Translates to: KEEGLHSSKLIQHNSLTICLHSR*RNESMH
Trigger: ATGCATACTCTCATTCCTCAAGCGAGAATGGAGGCA...TATGGTCAATGAATTGTGCTGGATGAGTTTCGAGGAATGTAGACCTTCTTCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR CAA 90 bp CTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTCATGGAGCAACTGGTATTTaGTTATTCTCTGAATGGGCT +
Preference number: 5 (lower is better)
Translates to: LSFQNNSELPVNLRGAFHGATGI*LFSEWA
Trigger: AGCCCATTCAGAGAATAACAAAATACCAGTTGCTCC...ATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp CTGACGAGGTTTAAGAGGTACATCTCTCAATTCAGAGAACTGCACGGAGTGAAATATCTCAGGAAGTCCTaGAGGAGCAACTGGTATTTT +
Preference number: 5 (lower is better)
Translates to: LTRFKRYISQFRELHGVKYLRKS*RSNWYF
Trigger: AAAATACCAGTTGCTCCTCAAGGACTTCCTGAGATA...TTTCACTCCGTGCAGTTCTCTGAATTGAGAGATGTACCTCTTAAACCTCGTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp CTGACGAGGTTTAAGAGGTACATCTCTCAATTCAGAGAACTGCACGGAGTGAAAATACTCAATGGGCGATaGCAGTGCATTCAAAAAGTC +
Preference number: 5 (lower is better)
Translates to: LTRFKRYISQFRELHGVKILNGR*QCIQKV
Trigger: GACTTTTTGAATGCACTGCAATCGCCCATTGAGTAT...TTTCACTCCGTGCAGTTCTCTGAATTGAGAGATGTACCTCTTAAACCTCGTCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp GTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACCAGGCCTTGCTCCTTTCTTTCCGTaGATACTCAATGGGCGATTG +
Preference number: 5 (lower is better)
Translates to: VMYQVLFHGFKKDLEPGLAPFFP*ILNGRL
Trigger: CAATCGCCCATTGAGTATCAACGGAAAGAAAGGAGC...AAGGCCTGGTTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp TATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAAAACCCTGGACTGCCATaGGAGGTAGATATCTTCAGG +
Preference number: 5 (lower is better)
Translates to: YLQSHSVLLWFTLHVYVKNPGLP*EVDIFR
Trigger: CCTGAAGATATCTACCTCCAATGGCAGTCCAGGGTT...TTTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp CCCAGGATCATCATCATCTGGGATTCCTTGTTATTTCCAACTTGCTGTGGAGAAATAAATCCCACTGTCTaGGGGCATCAGATTACAGAT +
Preference number: 5 (lower is better)
Translates to: PRIIIIWDSLLFPTCCGEINPTV*GHQITD
Trigger: ATCTGTAATCTGATGCCCCAAGACAGTGGGATTTAT...TTCTCCACAGCAAGTTGGAAATAACAAGGAATCCCAGATGATGATGATCCTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR CAA 90 bp AAGGAAGAAGGTCTACATTCCTCGAAACTCATCCAGCACAATTCATTGACCATAGGAACACCTTGCACTTaGACTGTTGCAGACGTTGAT +
Preference number: 5 (lower is better)
Translates to: KEEGLHSSKLIQHNSLTIGTPCT*TVADVD
Trigger: ATCAACGTCTGCAACAGTCAAAGTGCAAGGTGTTCC...TATGGTCAATGAATTGTGCTGGATGAGTTTCGAGGAATGTAGACCTTCTTCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR CAA 90 bp AGCAGAAACTCAACTTGTTATAAAAACTCAGAATGGCTCAGCAGGGGGATCTTGAAATCTCTGGCAGCATaGCTCACACCACAGAAGTAT +
Preference number: 5 (lower is better)
Translates to: SRNSTCYKNSEWLSRGILKSLAA*LTPQKY
Trigger: ATACTTCTGTGGTGTGAGCAATGCTGCCAGAGATTT...CAAGATCCCCCTGCTGAGCCATTCTGAGTTTTTATAACAAGTTGAGTTTCTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR CAA 90 bp CTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTCATTCCTGTAAGATCACATaGATGAAATCTCTGGCAGCA +
Preference number: 5 (lower is better)
Translates to: LSFQNNSELPVNLRGAFHSCKIT*MKSLAA
Trigger: TGCTGCCAGAGATTTCATCAATGTGATCTTACAGGA...ATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp GTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACCAGGCCTTCAGTCACATTCAGTCTaGCTTTGGTTCACACTGCAC +
Preference number: 5 (lower is better)
Translates to: VMYQVLFHGFKKDLEPGLQSHSV*LWFTLH
Trigger: GTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTG...AAGGCCTGGTTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp ATTCAGGTCATCCACAGTGGACAGAACAGAACTTGCCAAGCTGGACTTTATGGATTCAAAAGGGCAACATaGCTTTCTCTTAATGCACAG +
Preference number: 5 (lower is better)
Translates to: IQVIHSGQNRTCQAGLYGFKRAT*LSLNAQ
Trigger: CTGTGCATTAAGAGAAAGCAATGTTGCCCTTTTGAA...TCCATAAAGTCCAGCTTGGCAAGTTCTGTTCTGTCCACTGTGGATGACCTGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR CAA 90 bp TATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAAGAGCTGCCAGTGAATTaGCGGGGAGCGTTTCATATA +
Preference number: 5 (lower is better)
Translates to: YLQSHSVLLWFTLHVYVKELPVN*RGAFHI
Trigger: TATATGAAACGCTCCCCGCAAATTCACTGGCAGCTC...TTTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp TCAGGTATTGATGGAAACTCATATGATGGCCATCCCTGGGCCAACAAATTAGCTGACCTTGACCATTGTTaGTTTTTCCCATTTCAGCTG +
Preference number: 5 (lower is better)
Translates to: SGIDGNSYDGHPWANKLADLDHC*FFPFQL
Trigger: CAGCTGAAATGGGAAAAACAAACAATGGTCAAGGTC...AGCTAATTTGTTGGCCCAGGGATGGCCATCATATGAGTTTCCATCAATACCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR CAA 90 bp ACAGATAAAGAAACCGAAGCTCACACAAGACCACAAAGCAAGATTTTGCTGAGTCCACAAAGCAAGATTTaGCTGAGTCAAGACTGGGAC +
Preference number: 5 (lower is better)
Translates to: TDKETEAHTRPQSKILLSPQSKI*LSQDWD
Trigger: GTCCCAGTCTTGACTCAGCAAAATCTTGCTTTGTGG...ACTCAGCAAAATCTTGCTTTGTGGTCTTGTGTGAGCTTCGGTTTCTTTATCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439170.2
CDS TCA 90 bp CCAGAACTTGAGCCTAAGTTTGTGACTCATGGATTCAAGCATTTCTaGGGTCACAAAGATAAGGAGGATTCACATCTAGTGGTCTCTTCT +
Preference number: 5 (lower is better)
Translates to: PELEPKFVTHGFKHF*GHKDKEDSHLVVSS
Trigger: AGAAGAGACCACTAGATGTGAATCCTCCTTATCTTTGTGACCTCAGAAATGCTTGAATCCATGAGTCACAAACTTAGGCTCAAGTTCTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477496.5
CDS CCA 90 bp TTTTGCCTGAATCATCCAATTGTTTTCTTTAGTGGACTTGGCCAGTaGAAGGCAGTGTGCATAATGGATATCAGAAACACCTGGGTTCAA +
Preference number: 5 (lower is better)
Translates to: FCLNHPIVFFSGLGQ*KAVCIMDIRNTWVQ
Trigger: TTGAACCCAGGTGTTTCTGATATCCATTATGCACACTGCCTTCCACTGGCCAAGTCCACTAAAGAAAACAATTGGATGATTCAGGCAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000682575.1
CDS-3UTR CAA 90 bp TATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAACATGTCCACAACTCTTaGGTGTGTGTGTGGAAGGAA +
Preference number: 5 (lower is better)
Translates to: YLQSHSVLLWFTLHVYVKHVHNS*VCVWKE
Trigger: TTCCTTCCACACACACACCAAAGAGTTGTGGACATG...TTTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp TATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAACCTTCCTTGATGACATaGAGTGTGGCATCTAGAGTG +
Preference number: 5 (lower is better)
Translates to: YLQSHSVLLWFTLHVYVKPSLMT*SVASRV
Trigger: CACTCTAGATGCCACACTCAATGTCATCAAGGAAGG...TTTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp TATACACCAGAAAGCAGCATTGGCCTCAAAGTACAATTAGTCCTTTTAGTTCAGAAATTCACCTGTTTCTaGGATCCAGTCAAGCGCCTG +
Preference number: 5 (lower is better)
Translates to: YTPESSIGLKVQLVLLVQKFTCF*DPVKRL
Trigger: CAGGCGCTTGACTGGATCCAAGAAACAGGTGAATTT...CTGAACTAAAAGGACTAATTGTACTTTGAGGCCAATGCTGCTTTCTGGTGTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp GTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACCAGGCCTTTTATTATCCTCTGTGTaGACTCCTAGGGCTTTCTCC +
Preference number: 5 (lower is better)
Translates to: VMYQVLFHGFKKDLEPGLLLSSV*TPRAFS
Trigger: GGAGAAAGCCCTAGGAGTCAACACAGAGGATAATAA...AAGGCCTGGTTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp CTGACGAGGTTTAAGAGGTACATCTCTCAATTCAGAGAACTGCACGGAGTGAAAGAAATCGTAGATCTCTaGGATGTTGCCAAAGATGAT +
Preference number: 5 (lower is better)
Translates to: LTRFKRYISQFRELHGVKEIVDL*DVAKDD
Trigger: ATCATCTTTGGCAACATCCAAGAGATCTACGATTTC...TTTCACTCCGTGCAGTTCTCTGAATTGAGAGATGTACCTCTTAAACCTCGTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp TATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAAACATGCATGGCATCATaGGCTTTCTTTGGGACACTG +
Preference number: 5 (lower is better)
Translates to: YLQSHSVLLWFTLHVYVKTCMAS*AFFGTL
Trigger: CAGTGTCCCAAAGAAAGCCAATGATGCCATGCATGT...TTTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp CATTTTAGACTTTGGAGAGAAGCTCAGCAACCTCGAATTGCACCCAGTAGAGAAGAATCTTTGATCTCCTaGCTAAAAACCAAGGAGATC +
Preference number: 5 (lower is better)
Translates to: HFRLWREAQQPRIAPSREESLIS*LKTKEI
Trigger: GATCTCCTTGGTTTTTAGCAAGGAGATCAAAGATTC...TTCTCTACTGGGTGCAATTCGAGGTTGCTGAGCTTCTCTCCAAAGTCTAAAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CAA 90 bp CTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTCATGAATCTTTGATCTCCTaGCTAAAAACCAAGGAGATC +
Preference number: 5 (lower is better)
Translates to: LSFQNNSELPVNLRGAFHESLIS*LKTKEI
Trigger: GATCTCCTTGGTTTTTAGCAAGGAGATCAAAGATTC...ATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp TCTGTTAGGGTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAATTCAGCACTGTTTTATaGTCTGAGGATGGGGTGCGC +
Preference number: 5 (lower is better)
Translates to: SVRVMYQVLFHGFKKDLEFSTVL*SEDGVR
Trigger: GCGCACCCCATCCTCAGACAATAAAACAGTGCTGAA...TTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCACCCTAACAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp CAGCAATTCTCAGTCATGCAAATGCCCGTGTTAAAGTTCTCCATTGGATTTAAATTGATCCACTCCTGCTaGGTTTCAATGTTGGAGGCT +
Preference number: 5 (lower is better)
Translates to: QQFSVMQMPVLKFSIGFKLIHSC*VSMLEA
Trigger: AGCCTCCAACATTGAAACCAAGCAGGAGTGGATCAA...TTTAAATCCAATGGAGAACTTTAACACGGGCATTTGCATGACTGAGAATTGCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CAA 90 bp TACAAAGACAGTCCTTTCCTGAGCCAGGTGCAATTCCAGAGAATGACACTTTGCGTGAATGATCCTTTCTaGAATCACTTCTCGAATGTT +
Preference number: 5 (lower is better)
Translates to: YKDSPFLSQVQFQRMTLCVNDPF*NHFSNV
Trigger: AACATTCGAGAAGTGATTCAAGAAAGGATCATTCAC...GCAAAGTGTCATTCTCTGGAATTGCACCTGGCTCAGGAAAGGACTGTCTTTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CAA 90 bp TATACACCAGAAAGCAGCATTGGCCTCAAAGTACAATTAGTCCTTTTAGTTCAGTGCCTCCATTCTCGCTaGAGGAATGAGAGTATGCAT +
Preference number: 5 (lower is better)
Translates to: YTPESSIGLKVQLVLLVQCLHSR*RNESMH
Trigger: ATGCATACTCTCATTCCTCAAGCGAGAATGGAGGCA...CTGAACTAAAAGGACTAATTGTACTTTGAGGCCAATGCTGCTTTCTGGTGTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp CTGACGAGGTTTAAGAGGTACATCTCTCAATTCAGAGAACTGCACGGAGTGAAAAACTTTTCTATTGCATaGACAAGGTCTGCAGCAGTA +
Preference number: 5 (lower is better)
Translates to: LTRFKRYISQFRELHGVKNFSIA*TRSAAV
Trigger: TACTGCTGCAGACCTTGTCAATGCAATAGAAAAGTT...TTTCACTCCGTGCAGTTCTCTGAATTGAGAGATGTACCTCTTAAACCTCGTCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp CCCAGGATCATCATCATCTGGGATTCCTTGTTATTTCCAACTTGCTGTGGAGAACCTTCTAGACTCAGCTaGTTTTTGACCAACTTTTCT +
Preference number: 5 (lower is better)
Translates to: PRIIIIWDSLLFPTCCGEPSRLS*FLTNFS
Trigger: AGAAAAGTTGGTCAAAAACAAGCTGAGTCTAGAAGG...TTCTCCACAGCAAGTTGGAAATAACAAGGAATCCCAGATGATGATGATCCTGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR CAA 90 bp CTGACGAGGTTTAAGAGGTACATCTCTCAATTCAGAGAACTGCACGGAGTGAAACCTTCTAGACTCAGCTaGTTTTTGACCAACTTTTCT +
Preference number: 5 (lower is better)
Translates to: LTRFKRYISQFRELHGVKPSRLS*FLTNFS
Trigger: AGAAAAGTTGGTCAAAAACAAGCTGAGTCTAGAAGG...TTTCACTCCGTGCAGTTCTCTGAATTGAGAGATGTACCTCTTAAACCTCGTCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp TCAGGTATTGATGGAAACTCATATGATGGCCATCCCTGGGCCAACAAATTAGCTTCTTTAACAGAGACTTaGTTGCCCAGAATATCCTTG +
Preference number: 5 (lower is better)
Translates to: SGIDGNSYDGHPWANKLASLTET*LPRISL
Trigger: CAAGGATATTCTGGGCAACAAAGTCTCTGTTAAAGA...AGCTAATTTGTTGGCCCAGGGATGGCCATCATATGAGTTTCCATCAATACCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR CAA 90 bp CTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTCATTCTTTAACAGAGACTTaGTTGCCCAGAATATCCTTG +
Preference number: 5 (lower is better)
Translates to: LSFQNNSELPVNLRGAFHSLTET*LPRISL
Trigger: CAAGGATATTCTGGGCAACAAAGTCTCTGTTAAAGA...ATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp TTATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAGGAACACCTTGCACTTaGACTGTTGCAGACGTTGAT +
Preference number: 5 (lower is better)
Translates to: LFTVTFSLALVHTARLCEGTPCT*TVADVD
Trigger: ATCAACGTCTGCAACAGTCAAAGTGCAAGGTGTTCC...TTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp TATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAAATACATGTCTCCTCTTaGCTCTCATCCAAGAAGGGG +
Preference number: 5 (lower is better)
Translates to: YLQSHSVLLWFTLHVYVKIHVSS*LSSKKG
Trigger: CCCCTTCTTGGATGAGAGCAAAGAGGAGACATGTAT...TTTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp TATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAACAGTCACATTCAGTCTaGCTTTGGTTCACACTGCAC +
Preference number: 5 (lower is better)
Translates to: YLQSHSVLLWFTLHVYVKQSHSV*LWFTLH
Trigger: GTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTG...TTTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp CTGACGAGGTTTAAGAGGTACATCTCTCAATTCAGAGAACTGCACGGAGTGAAATTCAAAAGGGCAACATaGCTTTCTCTTAATGCACAG +
Preference number: 5 (lower is better)
Translates to: LTRFKRYISQFRELHGVKFKRAT*LSLNAQ
Trigger: CTGTGCATTAAGAGAAAGCAATGTTGCCCTTTTGAA...TTTCACTCCGTGCAGTTCTCTGAATTGAGAGATGTACCTCTTAAACCTCGTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp TCTGTTAGGGTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAAGAGCTGCCAGTGAATTaGCGGGGAGCGTTTCATATA +
Preference number: 5 (lower is better)
Translates to: SVRVMYQVLFHGFKKDLEELPVN*RGAFHI
Trigger: TATATGAAACGCTCCCCGCAAATTCACTGGCAGCTC...TTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCACCCTAACAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp TATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAATGGACAGAACAGAACTaGCCAAGCTGGACTTTATGG +
Preference number: 5 (lower is better)
Translates to: YLQSHSVLLWFTLHVYVKWTEQN*PSWTLW
Trigger: CCATAAAGTCCAGCTTGGCAAGTTCTGTTCTGTCCA...TTTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR CAA 90 bp ATCAATTGTTACAAGCCTGATGGAAGTATGTACTTATATGTATATGTGCGATGGCTCAGCAGGGGGATCTaGATTCAGGTCATCCACAGT +
Preference number: 5 (lower is better)
Translates to: INCYKPDGSMYLYVYVRWLSRGI*IQVIHS
Trigger: ACTGTGGATGACCTGAATCAAGATCCCCCTGCTGAG...CCATCGCACATATACATATAAGTACATACTTCCATCAGGCTTGTAACAATTGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR CAA 90 bp CTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTCATATCATCTGGGATTCCTaGTTATTTCCAACTTGCTGT +
Preference number: 5 (lower is better)
Translates to: LSFQNNSELPVNLRGAFHIIWDS*LFPTCC
Trigger: ACAGCAAGTTGGAAATAACAAGGAATCCCAGATGAT...ATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR CAA 90 bp AGCAGAAACTCAACTTGTTATAAAAACTCAGAATGGCTCAGCAGGGGGATCTTGACTAAGCCTCAGGAGTaGGCATTCCAAGAATTGTTA +
Preference number: 5 (lower is better)
Translates to: SRNSTCYKNSEWLSRGILTKPQE*AFQELL
Trigger: TAACAATTCTTGGAATGCCAACTCCTGAGGCTTAGT...CAAGATCCCCCTGCTGAGCCATTCTGAGTTTTTATAACAAGTTGAGTTTCTGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR CAA 90 bp AAGGAAGAAGGTCTACATTCCTCGAAACTCATCCAGCACAATTCATTGACCATAGGCCAACAAATTAGCTaGGTTAAACTAAGCCTCAGG +
Preference number: 5 (lower is better)
Translates to: KEEGLHSSKLIQHNSLTIGQQIS*VKLSLR
Trigger: CCTGAGGCTTAGTTTAACCAAGCTAATTTGTTGGCC...TATGGTCAATGAATTGTGCTGGATGAGTTTCGAGGAATGTAGACCTTCTTCCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR CAA 90 bp GCTCCCTCATATTCTCACAAATCTAAATTGCCATGCTCTTCCACAGAGGCAAGAAGAACATGGATTCAGTaGTTGATGGAAGTCAGGTAT +
Preference number: 5 (lower is better)
Translates to: APSYSHKSKLPCSSTEARRTWIQ*LMEVRY
Trigger: ATACCTGACTTCCATCAACAACTGAATCCATGTTCT...TCTTGCCTCTGTGGAAGAGCATGGCAATTTAGATTTGTGAGAATATGAGGGAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR CAA 90 bp TTGACCATACTGAATAAGGACATGGTGAGTTTGAACTTTGCCCTACTACAAAGATTTCCATTAGAAACATaGACCCACCTGGGCTGTCTG +
Preference number: 5 (lower is better)
Translates to: LTILNKDMVSLNFALLQRFPLET*THLGCL
Trigger: CAGACAGCCCAGGTGGGTCAATGTTTCTAATGGAAA...TCTTTGTAGTAGGGCAAAGTTCAAACTCACCATGTCCTTATTCAGTATGGTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR CAA 90 bp CTGACGAGGTTTAAGAGGTACATCTCTCAATTCAGAGAACTGCACGGAGTGAAATTTGTTAGTTTGGCTTaGTGGATGTCAAAAGACAGC +
Preference number: 5 (lower is better)
Translates to: LTRFKRYISQFRELHGVKFVSLA*WMSKDS
Trigger: GCTGTCTTTTGACATCCACAAAGCCAAACTAACAAA...TTTCACTCCGTGCAGTTCTCTGAATTGAGAGATGTACCTCTTAAACCTCGTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS CCA 90 bp GATGGGATACCCAGAGATGCCCCAACATCACAATTTATCTTTGAATaGCTGGTCATTTTAGCAAGGTCACTGTTACAGAACACATCAAAA +
Preference number: 5 (lower is better)
Translates to: DGIPRDAPTSQFIFE*LVILARSLLQNTSK
Trigger: TTTTGATGTGTTCTGTAACAGTGACCTTGCTAAAATGACCAGCCATTCAAAGATAAATTGTGATGTTGGGGCATCTCTGGGTATCCCATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462213.2
CDS-3UTR CAA 90 bp TCTGTTAGGGTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAAACCTCAAAGGTCATGTaGTTCATGGCTAGCTTCCGT +
Preference number: 5 (lower is better)
Translates to: SVRVMYQVLFHGFKKDLETSKVM*FMASFR
Trigger: ACGGAAGCTAGCCATGAACAACATGACCTTTGAGGT...TTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCACCCTAACAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp TATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAATTCCTGTGGATGTACTaGAGAAACACCTCAGCATTC +
Preference number: 5 (lower is better)
Translates to: YLQSHSVLLWFTLHVYVKFLWMY*RNTSAF
Trigger: GAATGCTGAGGTGTTTCTCAAGTACATCCACAGGAA...TTTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp TTATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAATTATTATCCTCTGTGTaGACTCCTAGGGCTTTCTCC +
Preference number: 5 (lower is better)
Translates to: LFTVTFSLALVHTARLCELLSSV*TPRAFS
Trigger: GGAGAAAGCCCTAGGAGTCAACACAGAGGATAATAA...TTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp TCTGTTAGGGTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAAACATGCATGGCATCATaGGCTTTCTTTGGGACACTG +
Preference number: 5 (lower is better)
Translates to: SVRVMYQVLFHGFKKDLETCMAS*AFFGTL
Trigger: CAGTGTCCCAAAGAAAGCCAATGATGCCATGCATGT...TTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCACCCTAACAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp TATACACCAGAAAGCAGCATTGGCCTCAAAGTACAATTAGTCCTTTTAGTTCAGTGCTTGGTTTCAATGTaGGAGGCTTTCAGCACTGTT +
Preference number: 5 (lower is better)
Translates to: YTPESSIGLKVQLVLLVQCLVSM*EAFSTV
Trigger: AACAGTGCTGAAAGCCTCCAACATTGAAACCAAGCA...CTGAACTAAAAGGACTAATTGTACTTTGAGGCCAATGCTGCTTTCTGGTGTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp CATTTTAGACTTTGGAGAGAAGCTCAGCAACCTCGAATTGCACCCAGTAGAGAAATCAGGTTTAATCTATaGAAAATAAAGCAGTGGGCC +
Preference number: 5 (lower is better)
Translates to: HFRLWREAQQPRIAPSREIRFNL*KIKQWA
Trigger: GGCCCACTGCTTTATTTTCAATAGATTAAACCTGAT...TTCTCTACTGGGTGCAATTCGAGGTTGCTGAGCTTCTCTCCAAAGTCTAAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240874.7
ENST00000460856.5
CDS-3UTR CAA 90 bp GTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACCAGGCCTTTTTCCAAACACGATTTaGTCCTTTCCTCGCATATCC +
Preference number: 5 (lower is better)
Translates to: VMYQVLFHGFKKDLEPGLFPNTI*SFPRIS
Trigger: GGATATGCGAGGAAAGGACAAAATCGTGTTTGGAAA...AAGGCCTGGTTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp TCTGTTAGGGTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACTGTGCCAATCTGTCTaGCTCCTGGATACACTTTTC +
Preference number: 5 (lower is better)
Translates to: SVRVMYQVLFHGFKKDLELCQSV*LLDTLF
Trigger: GAAAAGTGTATCCAGGAGCAAGACAGATTGGCACAG...TTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCACCCTAACAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp GTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACCAGGCCTTTATCTCAGGAAGTCCTaGAGGAGCAACTGGTATTTT +
Preference number: 5 (lower is better)
Translates to: VMYQVLFHGFKKDLEPGLYLRKS*RSNWYF
Trigger: AAAATACCAGTTGCTCCTCAAGGACTTCCTGAGATA...AAGGCCTGGTTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp TTATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAAGATTCATCATGTCATaGCAGCGTTTGGGAACAAGG +
Preference number: 5 (lower is better)
Translates to: LFTVTFSLALVHTARLCERFIMS*QRLGTR
Trigger: CCTTGTTCCCAAACGCTGCAATGACATGATGAATCT...TTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp TATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAACATGAACATGACTTCTaGATGCTCCCGTCACTACTT +
Preference number: 5 (lower is better)
Translates to: YLQSHSVLLWFTLHVYVKHEHDF*MLPSLL
Trigger: AAGTAGTGACGGGAGCATCAAGAAGTCATGTTCATG...TTTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp AAGGAAGAAGGTCTACATTCCTCGAAACTCATCCAGCACAATTCATTGACCATATTAACAGAGACTTTGTaGCCCAGAATATCCTTGGGT +
Preference number: 5 (lower is better)
Translates to: KEEGLHSSKLIQHNSLTILTETL*PRISLG
Trigger: ACCCAAGGATATTCTGGGCAACAAAGTCTCTGTTAA...TATGGTCAATGAATTGTGCTGGATGAGTTTCGAGGAATGTAGACCTTCTTCCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR CAA 90 bp GTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACCAGGCCTTTTAACAGAGACTTTGTaGCCCAGAATATCCTTGGGT +
Preference number: 5 (lower is better)
Translates to: VMYQVLFHGFKKDLEPGLLTETL*PRISLG
Trigger: ACCCAAGGATATTCTGGGCAACAAAGTCTCTGTTAA...AAGGCCTGGTTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp TTATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAATCCCGTGGTCATTTGTaGCTATGCAGGTATAAATCC +
Preference number: 5 (lower is better)
Translates to: LFTVTFSLALVHTARLCESRGHL*LCRYKS
Trigger: GGATTTATACCTGCATAGCAACAAATGACCACGGGA...TTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp TTATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAATGGTCCCGTGGTCATTaGTTGCTATGCAGGTATAAA +
Preference number: 5 (lower is better)
Translates to: LFTVTFSLALVHTARLCEWSRGH*LLCRYK
Trigger: TTTATACCTGCATAGCAACAAATGACCACGGGACCA...TTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp TCTGTTAGGGTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAAATACATGTCTCCTCTTaGCTCTCATCCAAGAAGGGG +
Preference number: 5 (lower is better)
Translates to: SVRVMYQVLFHGFKKDLEIHVSS*LSSKKG
Trigger: CCCCTTCTTGGATGAGAGCAAAGAGGAGACATGTAT...TTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCACCCTAACAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp TTATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAAAATCTCTGGCAGCATaGCTCACACCACAGAAGTAT +
Preference number: 5 (lower is better)
Translates to: LFTVTFSLALVHTARLCEKSLAA*LTPQKY
Trigger: ATACTTCTGTGGTGTGAGCAATGCTGCCAGAGATTT...TTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp CTTTCTTTCCAGAATAATTCTGAGCTGCCAGTGAATTTGCGGGGAGCGTTTCATTCTAATGATTGTACCTaGGCTCCAGTTAACAAAATC +
Preference number: 5 (lower is better)
Translates to: LSFQNNSELPVNLRGAFHSNDCT*APVNKI
Trigger: GATTTTGTTAACTGGAGCCAAGGTACAATCATTAGA...ATGAAACGCTCCCCGCAAATTCACTGGCAGCTCAGAATTATTCTGGAAAGAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR CAA 90 bp TTATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAGGTCACATATTGCATTaGTCTAACCCAGACTCCACA +
Preference number: 5 (lower is better)
Translates to: LFTVTFSLALVHTARLCEGHILH*SNPDST
Trigger: TGTGGAGTCTGGGTTAGACAAATGCAATATGTGACC...TTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR CAA 90 bp TCTGTTAGGGTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAAGTCTCAAAGATGAATTaGGAGCTGCCAAAGTTGGTC +
Preference number: 5 (lower is better)
Translates to: SVRVMYQVLFHGFKKDLEVSKMN*ELPKLV
Trigger: GACCAACTTTGGCAGCTCCAAATTCATCTTTGAGAC...TTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCACCCTAACAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp TCTGTTAGGGTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAATTCCTGTGGATGTACTaGAGAAACACCTCAGCATTC +
Preference number: 5 (lower is better)
Translates to: SVRVMYQVLFHGFKKDLEFLWMY*RNTSAF
Trigger: GAATGCTGAGGTGTTTCTCAAGTACATCCACAGGAA...TTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCACCCTAACAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp TTATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAATACTTCTCCAGCTCTTaGAGGAAGATGTTGTTATGG +
Preference number: 5 (lower is better)
Translates to: LFTVTFSLALVHTARLCEYFSSS*RKMLLW
Trigger: CCATAACAACATCTTCCTCAAAGAGCTGGAGAAGTA...TTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp TATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAATACTTCTCCAGCTCTTaGAGGAAGATGTTGTTATGG +
Preference number: 5 (lower is better)
Translates to: YLQSHSVLLWFTLHVYVKYFSSS*RKMLLW
Trigger: CCATAACAACATCTTCCTCAAAGAGCTGGAGAAGTA...TTTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp TTATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAATTCCTTCAGGAGCAGTaGATATTTGGTGATCCTTTG +
Preference number: 5 (lower is better)
Translates to: LFTVTFSLALVHTARLCEFLQEQ*IFGDPL
Trigger: CAAAGGATCACCAAATATCAACTGCTCCTGAAGGAA...TTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp TATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAATTCCTTCAGGAGCAGTaGATATTTGGTGATCCTTTG +
Preference number: 5 (lower is better)
Translates to: YLQSHSVLLWFTLHVYVKFLQEQ*IFGDPL
Trigger: CAAAGGATCACCAAATATCAACTGCTCCTGAAGGAA...TTTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp GTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACCAGGCCTTTGTCCTGAAGAATCTTaGATCTCCTTGCTAAAAACC +
Preference number: 5 (lower is better)
Translates to: VMYQVLFHGFKKDLEPGLCPEES*ISLLKT
Trigger: GGTTTTTAGCAAGGAGATCAAAGATTCTTCAGGACA...AAGGCCTGGTTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp TCTGTTAGGGTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAATGCTTGGTTTCAATGTaGGAGGCTTTCAGCACTGTT +
Preference number: 5 (lower is better)
Translates to: SVRVMYQVLFHGFKKDLECLVSM*EAFSTV
Trigger: AACAGTGCTGAAAGCCTCCAACATTGAAACCAAGCA...TTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCACCCTAACAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp TATACACCAGAAAGCAGCATTGGCCTCAAAGTACAATTAGTCCTTTTAGTTCAGTCCTGTGTAGGGTCGTaGTCAAAAATCTTCATAGGT +
Preference number: 5 (lower is better)
Translates to: YTPESSIGLKVQLVLLVQSCVGS*SKIFIG
Trigger: ACCTATGAAGATTTTTGACAACGACCCTACACAGGA...CTGAACTAAAAGGACTAATTGTACTTTGAGGCCAATGCTGCTTTCTGGTGTATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp GTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACCAGGCCTTAACTTTTCTATTGCATaGACAAGGTCTGCAGCAGTA +
Preference number: 5 (lower is better)
Translates to: VMYQVLFHGFKKDLEPGLNFSIA*TRSAAV
Trigger: TACTGCTGCAGACCTTGTCAATGCAATAGAAAAGTT...AAGGCCTGGTTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp AGCAGAAACTCAACTTGTTATAAAAACTCAGAATGGCTCAGCAGGGGGATCTTGAGACTCAGCTTGTTTTaGACCAACTTTTCTATTGCA +
Preference number: 5 (lower is better)
Translates to: SRNSTCYKNSEWLSRGILRLSLF*TNFSIA
Trigger: TGCAATAGAAAAGTTGGTCAAAAACAAGCTGAGTCT...CAAGATCCCCCTGCTGAGCCATTCTGAGTTTTTATAACAAGTTGAGTTTCTGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR CAA 90 bp GTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACCAGGCCTTCCTTCTAGACTCAGCTaGTTTTTGACCAACTTTTCT +
Preference number: 5 (lower is better)
Translates to: VMYQVLFHGFKKDLEPGLPSRLS*FLTNFS
Trigger: AGAAAAGTTGGTCAAAAACAAGCTGAGTCTAGAAGG...AAGGCCTGGTTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp TATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAATTTCCAAACACGATTTaGTCCTTTCCTCGCATATCC +
Preference number: 5 (lower is better)
Translates to: YLQSHSVLLWFTLHVYVKFPNTI*SFPRIS
Trigger: GGATATGCGAGGAAAGGACAAAATCGTGTTTGGAAA...TTTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp TTATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAATTTCCAAACACGATTTaGTCCTTTCCTCGCATATCC +
Preference number: 5 (lower is better)
Translates to: LFTVTFSLALVHTARLCEFPNTI*SFPRIS
Trigger: GGATATGCGAGGAAAGGACAAAATCGTGTTTGGAAA...TTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp ATCAATTGTTACAAGCCTGATGGAAGTATGTACTTATATGTATATGTGCGATGGCTGTGCCAATCTGTCTaGCTCCTGGATACACTTTTC +
Preference number: 5 (lower is better)
Translates to: INCYKPDGSMYLYVYVRWLCQSV*LLDTLF
Trigger: GAAAAGTGTATCCAGGAGCAAGACAGATTGGCACAG...CCATCGCACATATACATATAAGTACATACTTCCATCAGGCTTGTAACAATTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR CAA 90 bp TTGACCATACTGAATAAGGACATGGTGAGTTTGAACTTTGCCCTACTACAAAGAGGAGCAACTGGTATTTaGTTATTCTCTGAATGGGCT +
Preference number: 5 (lower is better)
Translates to: LTILNKDMVSLNFALLQRGATGI*LFSEWA
Trigger: AGCCCATTCAGAGAATAACAAAATACCAGTTGCTCC...TCTTTGTAGTAGGGCAAAGTTCAAACTCACCATGTCCTTATTCAGTATGGTCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR CAA 90 bp TCTGTTAGGGTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAAATGTCATTGCAGCGTTaGGGAACAAGGCACATTAAC +
Preference number: 5 (lower is better)
Translates to: SVRVMYQVLFHGFKKDLEMSLQR*GTRHIN
Trigger: GTTAATGTGCCTTGTTCCCAAACGCTGCAATGACAT...TTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCACCCTAACAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp ATCAATTGTTACAAGCCTGATGGAAGTATGTACTTATATGTATATGTGCGATGGGCTCCTTTCTTTCCGTaGATACTCAATGGGCGATTG +
Preference number: 5 (lower is better)
Translates to: INCYKPDGSMYLYVYVRWAPFFP*ILNGRL
Trigger: CAATCGCCCATTGAGTATCAACGGAAAGAAAGGAGC...CCATCGCACATATACATATAAGTACATACTTCCATCAGGCTTGTAACAATTGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR CAA 90 bp TATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAAATAAATCCCACTGTCTaGGGGCATCAGATTACAGAT +
Preference number: 5 (lower is better)
Translates to: YLQSHSVLLWFTLHVYVKINPTV*GHQITD
Trigger: ATCTGTAATCTGATGCCCCAAGACAGTGGGATTTAT...TTTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp TTGACCATACTGAATAAGGACATGGTGAGTTTGAACTTTGCCCTACTACAAAGATCCTGTAAGATCACATaGATGAAATCTCTGGCAGCA +
Preference number: 5 (lower is better)
Translates to: LTILNKDMVSLNFALLQRSCKIT*MKSLAA
Trigger: TGCTGCCAGAGATTTCATCAATGTGATCTTACAGGA...TCTTTGTAGTAGGGCAAAGTTCAAACTCACCATGTCCTTATTCAGTATGGTCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR CAA 90 bp TTATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAATCCTGTAAGATCACATaGATGAAATCTCTGGCAGCA +
Preference number: 5 (lower is better)
Translates to: LFTVTFSLALVHTARLCESCKIT*MKSLAA
Trigger: TGCTGCCAGAGATTTCATCAATGTGATCTTACAGGA...TTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp GTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACCAGGCCTTTTCAAAAGGGCAACATaGCTTTCTCTTAATGCACAG +
Preference number: 5 (lower is better)
Translates to: VMYQVLFHGFKKDLEPGLFKRAT*LSLNAQ
Trigger: CTGTGCATTAAGAGAAAGCAATGTTGCCCTTTTGAA...AAGGCCTGGTTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp TTATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAATCTCACAAATCTAAATaGCCATGCTCTTCCACAGAG +
Preference number: 5 (lower is better)
Translates to: LFTVTFSLALVHTARLCESHKSK*PCSSTE
Trigger: CTCTGTGGAAGAGCATGGCAATTTAGATTTGTGAGA...TTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR CAA 90 bp TTATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAAAGGACATGGTGAGTTaGAACTTTGCCCTACTACAA +
Preference number: 5 (lower is better)
Translates to: LFTVTFSLALVHTARLCEKDMVS*NFALLQ
Trigger: TTGTAGTAGGGCAAAGTTCAAACTCACCATGTCCTT...TTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR CAA 90 bp TATACACCAGAAAGCAGCATTGGCCTCAAAGTACAATTAGTCCTTTTAGTTCAGTTTTGTTCCAAATGTTaGCTGATGAGGGGAATGACA +
Preference number: 5 (lower is better)
Translates to: YTPESSIGLKVQLVLLVQFCSKC*LMRGMT
Trigger: TGTCATTCCCCTCATCAGCAAACATTTGGAACAAAA...CTGAACTAAAAGGACTAATTGTACTTTGAGGCCAATGCTGCTTTCTGGTGTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp TATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAATTTTGTTCCAAATGTTaGCTGATGAGGGGAATGACA +
Preference number: 5 (lower is better)
Translates to: YLQSHSVLLWFTLHVYVKFCSKC*LMRGMT
Trigger: TGTCATTCCCCTCATCAGCAAACATTTGGAACAAAA...TTTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp TATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAAGAAATCGTAGATCTCTaGGATGTTGCCAAAGATGAT +
Preference number: 5 (lower is better)
Translates to: YLQSHSVLLWFTLHVYVKEIVDL*DVAKDD
Trigger: ATCATCTTTGGCAACATCCAAGAGATCTACGATTTC...TTTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp TCTGTTAGGGTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAATCCAGGATAAGCTGGTaGGAATCAGGCTTGTTTTTA +
Preference number: 5 (lower is better)
Translates to: SVRVMYQVLFHGFKKDLESRISW*ESGLFL
Trigger: TAAAAACAAGCCTGATTCCAACCAGCTTATCCTGGA...TTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCACCCTAACAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp TATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAAGAATCTTTGATCTCCTaGCTAAAAACCAAGGAGATC +
Preference number: 5 (lower is better)
Translates to: YLQSHSVLLWFTLHVYVKESLIS*LKTKEI
Trigger: GATCTCCTTGGTTTTTAGCAAGGAGATCAAAGATTC...TTTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp TATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAATGTCCTGAAGAATCTTaGATCTCCTTGCTAAAAACC +
Preference number: 5 (lower is better)
Translates to: YLQSHSVLLWFTLHVYVKCPEES*ISLLKT
Trigger: GGTTTTTAGCAAGGAGATCAAAGATTCTTCAGGACA...TTTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp GTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACCAGGCCTTGTGAATGATCCTTTCTaGAATCACTTCTCGAATGTT +
Preference number: 5 (lower is better)
Translates to: VMYQVLFHGFKKDLEPGLVNDPF*NHFSNV
Trigger: AACATTCGAGAAGTGATTCAAGAAAGGATCATTCAC...AAGGCCTGGTTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp TCTGTTAGGGTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAATCCTGTGTAGGGTCGTaGTCAAAAATCTTCATAGGT +
Preference number: 5 (lower is better)
Translates to: SVRVMYQVLFHGFKKDLESCVGS*SKIFIG
Trigger: ACCTATGAAGATTTTTGACAACGACCCTACACAGGA...TTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCACCCTAACAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp TTATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAAACTTTTCTATTGCATaGACAAGGTCTGCAGCAGTA +
Preference number: 5 (lower is better)
Translates to: LFTVTFSLALVHTARLCENFSIA*TRSAAV
Trigger: TACTGCTGCAGACCTTGTCAATGCAATAGAAAAGTT...TTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp TCTGTTAGGGTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAAGGAGCAACTGGTATTTaGTTATTCTCTGAATGGGCT +
Preference number: 5 (lower is better)
Translates to: SVRVMYQVLFHGFKKDLEGATGI*LFSEWA
Trigger: AGCCCATTCAGAGAATAACAAAATACCAGTTGCTCC...TTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCACCCTAACAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp TCTGTTAGGGTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAAATACTCAATGGGCGATaGCAGTGCATTCAAAAAGTC +
Preference number: 5 (lower is better)
Translates to: SVRVMYQVLFHGFKKDLEILNGR*QCIQKV
Trigger: GACTTTTTGAATGCACTGCAATCGCCCATTGAGTAT...TTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCACCCTAACAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp TCTGTTAGGGTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAAATAAATCCCACTGTCTaGGGGCATCAGATTACAGAT +
Preference number: 5 (lower is better)
Translates to: SVRVMYQVLFHGFKKDLEINPTV*GHQITD
Trigger: ATCTGTAATCTGATGCCCCAAGACAGTGGGATTTAT...TTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCACCCTAACAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp ATCAATTGTTACAAGCCTGATGGAAGTATGTACTTATATGTATATGTGCGATGGACATTCAGTCTTGCTTaGGTTCACACTGCACGTCTA +
Preference number: 5 (lower is better)
Translates to: INCYKPDGSMYLYVYVRWTFSLA*VHTARL
Trigger: TAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGT...CCATCGCACATATACATATAAGTACATACTTCCATCAGGCTTGTAACAATTGAT
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR CAA 90 bp AAGGAAGAAGGTCTACATTCCTCGAAACTCATCCAGCACAATTCATTGACCATAGTGATGTATCAGGTTTaGTTCCATGGCTTTAAAAAG +
Preference number: 5 (lower is better)
Translates to: KEEGLHSSKLIQHNSLTIVMYQV*FHGFKK
Trigger: CTTTTTAAAGCCATGGAACAAAACCTGATACATCAC...TATGGTCAATGAATTGTGCTGGATGAGTTTCGAGGAATGTAGACCTTCTTCCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR CAA 90 bp ATCAATTGTTACAAGCCTGATGGAAGTATGTACTTATATGTATATGTGCGATGGTATACCCCCTTTCTCTaGGGGCCTCTATTAAGTTCA +
Preference number: 5 (lower is better)
Translates to: INCYKPDGSMYLYVYVRWYTPFL*GPLLSS
Trigger: TGAACTTAATAGAGGCCCCAAGAGAAAGGGGGTATA...CCATCGCACATATACATATAAGTACATACTTCCATCAGGCTTGTAACAATTGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR CAA 90 bp TTATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAACTTGTTATTTCCAACTaGCTGTGGAGAACTCTTGAA +
Preference number: 5 (lower is better)
Translates to: LFTVTFSLALVHTARLCELVISN*LWRTLE
Trigger: TTCAAGAGTTCTCCACAGCAAGTTGGAAATAACAAG...TTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR CAA 90 bp TTGACCATACTGAATAAGGACATGGTGAGTTTGAACTTTGCCCTACTACAAAGAATCCAGCACAATTCATaGACCATACTGAATAAGGAC +
Preference number: 5 (lower is better)
Translates to: LTILNKDMVSLNFALLQRIQHNS*TILNKD
Trigger: GTCCTTATTCAGTATGGTCAATGAATTGTGCTGGAT...TCTTTGTAGTAGGGCAAAGTTCAAACTCACCATGTCCTTATTCAGTATGGTCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR CAA 90 bp TATACACCAGAAAGCAGCATTGGCCTCAAAGTACAATTAGTCCTTTTAGTTCAGGATGGAAGTCAGGTATaGATGGAAACTCATATGATG +
Preference number: 5 (lower is better)
Translates to: YTPESSIGLKVQLVLLVQDGSQV*METHMM
Trigger: CATCATATGAGTTTCCATCAATACCTGACTTCCATC...CTGAACTAAAAGGACTAATTGTACTTTGAGGCCAATGCTGCTTTCTGGTGTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR CAA 90 bp GTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAACCAGGCCTTTCACACTTTGTTAGTTaGGCTTTGTGGATGTCAAAA +
Preference number: 5 (lower is better)
Translates to: VMYQVLFHGFKKDLEPGLSHFVS*ALWMSK
Trigger: TTTTGACATCCACAAAGCCAAACTAACAAAGTGTGA...AAGGCCTGGTTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR CAA 90 bp GATAAAGAAACCGAAGCTCACACAAGACCACAAAGCAAGATTTTGCTGAGTCAATATTCTAGATTCAAGTaGAGTATGGTGCAGGCATTT +
Preference number: 5 (lower is better)
Translates to: DKETEAHTRPQSKILLSQYSRFK*SMVQAF
Trigger: AAATGCCTGCACCATACTCAACTTGAATCTAGAATA...TTGACTCAGCAAAATCTTGCTTTGTGGTCTTGTGTGAGCTTCGGTTTCTTTATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439170.2
CDS-3UTR CAA 90 bp TTATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAGTGAATGATCCTTTCTaGAATCACTTCTCGAATGTT +
Preference number: 5 (lower is better)
Translates to: LFTVTFSLALVHTARLCEVNDPF*NHFSNV
Trigger: AACATTCGAGAAGTGATTCAAGAAAGGATCATTCAC...TTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp TATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAAAGACTCAGCTTGTTTTaGACCAACTTTTCTATTGCA +
Preference number: 5 (lower is better)
Translates to: YLQSHSVLLWFTLHVYVKRLSLF*TNFSIA
Trigger: TGCAATAGAAAAGTTGGTCAAAAACAAGCTGAGTCT...TTTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp TCTGTTAGGGTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAATCTTTAACAGAGACTTaGTTGCCCAGAATATCCTTG +
Preference number: 5 (lower is better)
Translates to: SVRVMYQVLFHGFKKDLESLTET*LPRISL
Trigger: CAAGGATATTCTGGGCAACAAAGTCTCTGTTAAAGA...TTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCACCCTAACAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp TTATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAGTGATGTATCAGGTTTaGTTCCATGGCTTTAAAAAG +
Preference number: 5 (lower is better)
Translates to: LFTVTFSLALVHTARLCEVMYQV*FHGFKK
Trigger: CTTTTTAAAGCCATGGAACAAAACCTGATACATCAC...TTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS-3UTR CAA 90 bp TTATTTACAGTCACATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTGAAAAAAAGATTCAAGGTTaGTCCTCCAAAAATGAGCAG +
Preference number: 5 (lower is better)
Translates to: LFTVTFSLALVHTARLCEKKIQG*SSKNEQ
Trigger: CTGCTCATTTTTGGAGGACAAACCTTGAATCTTTTT...TTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAATGTGACTGTAAATAA
38% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000291478.9
CDS-3UTR CAA 90 bp TCTGTTAGGGTGATGTATCAGGTTTTGTTCCATGGCTTTAAAAAGGACTTAGAAGTGATGTATCAGGTTTaGTTCCATGGCTTTAAAAAG +
Preference number: 5 (lower is better)
Translates to: SVRVMYQVLFHGFKKDLEVMYQV*FHGFKK
Trigger: CTTTTTAAAGCCATGGAACAAAACCTGATACATCAC...TTCTAAGTCCTTTTTAAAGCCATGGAACAAAACCTGATACATCACCCTAACAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS TCA 90 bp TACATAGTTCCAGCCTTCTGGGTATCTCTGGTCTATTGCGGTAAATaGATAAAAGAACCGGAATATAAACATAAGTGCTACAATTTAGAT +
Preference number: 5 (lower is better)
Translates to: YIVPAFWVSLVYCGK*IKEPEYKHKCYNLD
Trigger: ATCTAAATTGTAGCACTTATGTTTATATTCCGGTTCTTTTATTCATTTACCGCAATAGACCAGAGATACCCAGAAGGCTGGAACTATGTA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683280.1
CDS TCA 72 bp CAGCGCTCCCGCATGGCACGGGGCGCCAGCCCGGGGTaGGAGCGCGGCGGGAAGGAAACTTCAGCGCCGCCG +
Preference number: 6 (lower is better)
Translates to: QRSRMARGASPG*ERGGKETSAPP
Trigger: CGGCGGCGCTGAAGTTTCCTTCCCGCCGCGCTCTCACCCCGGGCTGGCGCCCCGTGCCATGCGGGAGCGCTG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000454902.1
ENST00000682363.1
CDS GCA 72 bp GACCTCGGGTGTAAGCCCTGTCGCCGCCCTTCATGTTaGCCCGCCGCCCCAGCGCTCCCGCATGGCACGGGG +
Preference number: 6 (lower is better)
Translates to: DLGCKPCRRPSC*PAAPALPHGTG
Trigger: CCCCGTGCCATGCGGGAGCGCTGGGGCGGCGGGGCAACATGAAGGGCGGCGACAGGGCTTACACCCGAGGTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000454902.1
ENST00000682363.1
CDS CCA 72 bp AGTCAAGTTGCAGTCGCGCCTTCCAGCAGCCCACCCTaGGGCTCCCCGGAGCTGAAGCGGAGGGGCGTGGGC +
Preference number: 6 (lower is better)
Translates to: SQVAVAPSSSPP*GSPELKRRGVG
Trigger: GCCCACGCCCCTCCGCTTCAGCTCCGGGGAGCCCCAGGGTGGGCTGCTGGAAGGCGCGACTGCAACTTGACT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000682540.1
ENST00000682674.1
ENST00000682695.1
ENST00000683512.1
ENST00000684382.1
ENST00000684410.1
CDS CCA 72 bp TGGGGACCAGACCCTCCAAGGGCGGGCTCCGTTCGGTaGTACGGACCAGACACCAACCAGGCCGCTCGCTGG +
Preference number: 6 (lower is better)
Translates to: WGPDPPRAGSVR*YGPDTNQAARW
Trigger: CCAGCGAGCGGCCTGGTTGGTGTCTGGTCCGTACCACCGAACGGAGCCCGCCCTTGGAGGGTCTGGTCCCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000354186.8
ENST00000360013.7
ENST00000393496.5
ENST00000471431.1
ENST00000682506.1
ENST00000683592.1
ENST00000684360.1
CDS GCA 72 bp AGACGCAGAGCTGCAGCCGCTGGTGGAGCCGCACCTTaGGGTGCTGCCAGATGCTCTCCAGCCGTCGCTGGT +
Preference number: 6 (lower is better)
Translates to: RRRAAAAGGAAP*GAARCSPAVAG
Trigger: ACCAGCGACGGCTGGAGAGCATCTGGCAGCACCGCAAGGTGCGGCTCCACCAGCGGCTGCAGCTCTGCGTCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000240874.7
ENST00000354186.8
ENST00000360013.7
ENST00000460856.5
ENST00000682506.1
ENST00000683124.1
ENST00000683592.1
ENST00000684186.1
ENST00000684276.1
CDS GCA 72 bp CCACGCTGCTTCGGGAGTGTGAGATGCACAGGGCGCTaGTGGGGACCAGACCCTCCAAGGGCGGGCTCCGTT +
Preference number: 6 (lower is better)
Translates to: PRCFGSVRCTGR*WGPDPPRAGSV
Trigger: AACGGAGCCCGCCCTTGGAGGGTCTGGTCCCCAGCAGCGCCCTGTGCATCTCACACTCCCGAAGCAGCGTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000354186.8
ENST00000360013.7
ENST00000393496.5
ENST00000471431.1
ENST00000682506.1
ENST00000683592.1
ENST00000684360.1
CDS CAA 72 bp AAGACGCAGAGCTGCAGCCGCTGGTGGAGCCGCACCTaGCGGTGCTGCCAGATGCTCTCCAGCCGTCGCTGG +
Preference number: 6 (lower is better)
Translates to: KTQSCSRWWSRT*RCCQMLSSRRW
Trigger: CCAGCGACGGCTGGAGAGCATCTGGCAGCACCGCAAGGTGCGGCTCCACCAGCGGCTGCAGCTCTGCGTCTT
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000240874.7
ENST00000354186.8
ENST00000360013.7
ENST00000460856.5
ENST00000682506.1
ENST00000683124.1
ENST00000683592.1
ENST00000684186.1
ENST00000684276.1
CDS CCA 72 bp ATGCTGCCTGGGACCCAGCCCTCGGCGGCGGGGGAATaGTCGCTGGCAGGCTGGTACACCAGACACATGTTC +
Preference number: 6 (lower is better)
Translates to: MLPGTQPSAAGE*SLAGWYTRHMF
Trigger: GAACATGTGTCTGGTGTACCAGCCTGCCAGCGACCATTCCCCCGCCGCCGAGGGCTGGGTCCCAGGCAGCAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
ENST00000393496.5
ENST00000459915.2
ENST00000682290.1
ENST00000682363.1
ENST00000682506.1
ENST00000683592.1
ENST00000684360.1
CDS TCA 72 bp GGTCCTCGAGGCGCGAGAGCAGGTGCACGGCGCTGTTaGAGAACTCCTCCAGGGAGAGCCGCAGTTCGATCC +
Preference number: 6 (lower is better)
Translates to: GPRGARAGARRC*RTPPGRAAVRS
Trigger: GGATCGAACTGCGGCTCTCCCTGGAGGAGTTCTTCAACAGCGCCGTGCACCTGCTCTCGCGCCTCGAGGACC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000240874.7
ENST00000354186.8
ENST00000360013.7
ENST00000460856.5
ENST00000498499.1
ENST00000682506.1
ENST00000683124.1
ENST00000683592.1
ENST00000684186.1
ENST00000684276.1
CDS GCA 72 bp AGACCCTGTCCGGAAAAAGGCGTCCACGTCCGAGTCTaGTGCTCCTCCTTCCTCCGCTGCTCCCTCAGGGGG +
Preference number: 6 (lower is better)
Translates to: RPCPEKGVHVRV*CSSFLRCSLRG
Trigger: CCCCCTGAGGGAGCAGCGGAGGAAGGAGGAGCAGCAGACTCGGACGTGGACGCCTTTTTCCGGACAGGGTCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000682506.1
ENST00000683571.1
CDS CCA 72 bp TGCTGCTCTGGCTGCCCGCTGTTGCTGGAGGATGCCTaGGGTGCCCTCTGTGAGGACACCAGTGTCGGATCC +
Preference number: 6 (lower is better)
Translates to: CCSGCPLLLEDA*GALCEDTSVGS
Trigger: GGATCCGACACTGGTGTCCTCACAGAGGGCACCCCAGGCATCCTCCAGCAACAGCGGGCAGCCAGAGCAGCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684441.1
CDS TCA 72 bp TGGTGGGAGGTCCCAACGGTGCCACGGCTAACCCGGTaGGCTGCAGGGACAAGTCCCAGGATGCGCGCTAAA +
Preference number: 6 (lower is better)
Translates to: WWEVPTVPRLTR*AAGTSPRMRAK
Trigger: TTTAGCGCGCATCCTGGGACTTGTCCCTGCAGCTCACCGGGTTAGCCGTGGCACCGTTGGGACCTCCCACCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000240874.7
ENST00000460856.5
ENST00000682277.1
ENST00000682540.1
ENST00000682695.1
ENST00000683146.1
ENST00000683356.1
ENST00000684276.1
ENST00000684374.1
ENST00000684382.1
CDS GCA 72 bp AGCATCTCCTGGAGGTCCTCGAGGCGCGAGAGCAGGTaGACGGCGCTGTTGAAGAACTCCTCCAGGGAGAGC +
Preference number: 6 (lower is better)
Translates to: SISWRSSRRESR*TALLKNSSRES
Trigger: GCTCTCCCTGGAGGAGTTCTTCAACAGCGCCGTGCACCTGCTCTCGCGCCTCGAGGACCTCCAGGAGATGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000240874.7
ENST00000354186.8
ENST00000360013.7
ENST00000460856.5
ENST00000498499.1
ENST00000682506.1
ENST00000683124.1
ENST00000683592.1
ENST00000684186.1
ENST00000684276.1
CDS GCA 72 bp CCAGGCTCTGGAAGTCAGCACTGCCCGGGATGCAGTTaGGTCCTGAGAAGCCGTCGCTGCAGCGGATGCACT +
Preference number: 6 (lower is better)
Translates to: PGSGSQHCPGCS*VLRSRRCSGCT
Trigger: AGTGCATCCGCTGCAGCGACGGCTTCTCAGGACGCAACTGCATCCCGGGCAGTGCTGACTTCCAGAGCCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000240874.7
ENST00000354186.8
ENST00000360013.7
ENST00000460856.5
ENST00000498499.1
ENST00000682506.1
ENST00000683124.1
ENST00000683592.1
ENST00000684186.1
ENST00000684276.1
CDS GCA 72 bp CTGAGGATGGGGTGCGCCCAGACCACAAGGCGAATTTaGAGGGATCGCCCTCCACGTGCTCGGTCACACCCA +
Preference number: 6 (lower is better)
Translates to: LRMGCAQTTRRI*RDRPPRARSHP
Trigger: TGGGTGTGACCGAGCACGTGGAGGGCGATCCCTGCAAATTCGCCTTGTGGTCTGGGCGCACCCCATCCTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000240874.7
ENST00000354186.8
ENST00000360013.7
ENST00000460856.5
ENST00000473056.1
ENST00000682277.1
ENST00000682506.1
ENST00000682540.1
ENST00000682575.1
ENST00000682695.1
ENST00000683146.1
ENST00000683356.1
ENST00000683592.1
ENST00000684276.1
ENST00000684360.1
ENST00000684374.1
ENST00000684382.1
ENST00000684410.1
CDS GCA 72 bp CCGGCCTGGAGCAGCACCTCGGCTTTCTGCTGTACCTaGAGGGCACTCTGGTGCGTCTTCTCGATGGCCAGT +
Preference number: 6 (lower is better)
Translates to: PAWSSTSAFCCT*RALWCVFSMAS
Trigger: ACTGGCCATCGAGAAGACGCACCAGAGTGCCCTGCAGGTACAGCAGAAAGCCGAGGTGCTGCTCCAGGCCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000354186.8
ENST00000460856.5
ENST00000682575.1
ENST00000683356.1
ENST00000683592.1
ENST00000684382.1
ENST00000684410.1
CDS GCA 72 bp AGCAGTCCATCTCCACGCTGCTTCGGGAGTGTGAGATaGACAGGGCGCTGCTGGGGACCAGACCCTCCAAGG +
Preference number: 6 (lower is better)
Translates to: SSPSPRCFGSVR*TGRCWGPDPPR
Trigger: CCTTGGAGGGTCTGGTCCCCAGCAGCGCCCTGTGCATCTCACACTCCCGAAGCAGCGTGGAGATGGACTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000354186.8
ENST00000360013.7
ENST00000393496.5
ENST00000471431.1
ENST00000682506.1
ENST00000683592.1
ENST00000684360.1
CDS GCA 72 bp AGCAAGCGAGCAGCCTGCAGGCGGGCACCAGCTAGGTaGCTCATCCACCCCTGGGATTTCTCAGAGGTGCAG +
Preference number: 6 (lower is better)
Translates to: SKRAACRRAPAR*LIHPWDFSEVQ
Trigger: CTGCACCTCTGAGAAATCCCAGGGGTGGATGAGGCACCTAGCTGGTGCCCGCCTGCAGGCTGCTCGCTTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000682540.1
ENST00000682695.1
ENST00000684410.1
CDS CCA 72 bp ACATCCACAGGAAACTCCTTCCGGGCTAGCATCTCCTaGAGGTCCTCGAGGCGCGAGAGCAGGTGCACGGCG +
Preference number: 6 (lower is better)
Translates to: TSTGNSFRASIS*RSSRRESRCTA
Trigger: CGCCGTGCACCTGCTCTCGCGCCTCGAGGACCTCCAGGAGATGCTAGCCCGGAAGGAGTTTCCTGTGGATGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000240874.7
ENST00000354186.8
ENST00000360013.7
ENST00000460856.5
ENST00000498499.1
ENST00000682506.1
ENST00000683124.1
ENST00000683592.1
ENST00000684186.1
ENST00000684276.1
CDS CCA 72 bp CTGAGCCCGCAGGAACAGAGGAGTAGGGCCTGGGGCTaGCTTGGGGAAGCCTGGCAGGTTGAGACCTCATCA +
Preference number: 6 (lower is better)
Translates to: LSPQEQRSRAWG*LGEAWQVETSS
Trigger: TGATGAGGTCTCAACCTGCCAGGCTTCCCCAAGCCAGCCCCAGGCCCTACTCCTCTGTTCCTGCGGGCTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
ENST00000393496.5
ENST00000459915.2
ENST00000682290.1
ENST00000682363.1
ENST00000682506.1
ENST00000683592.1
ENST00000684360.1
CDS CCA 72 bp CCTCTCTCCTCTCAAGGCCCAGTAGAGGGCCCCACATaGAGGGGTGAGAAGCTGCCACCCAGGAGGCTGAGA +
Preference number: 6 (lower is better)
Translates to: PLSSQGPVEGPT*RGEKLPPRRLR
Trigger: TCTCAGCCTCCTGGGTGGCAGCTTCTCACCCCTCCATGTGGGGCCCTCTACTGGGCCTTGAGAGGAGAGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448253.6
CDS CAA 72 bp AGGTCCTCGAGGCGCGAGAGCAGGTGCACGGCGCTGTaGAAGAACTCCTCCAGGGAGAGCCGCAGTTCGATC +
Preference number: 6 (lower is better)
Translates to: RSSRRESRCTAL*KNSSRESRSSI
Trigger: GATCGAACTGCGGCTCTCCCTGGAGGAGTTCTTCAACAGCGCCGTGCACCTGCTCTCGCGCCTCGAGGACCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000240874.7
ENST00000354186.8
ENST00000360013.7
ENST00000460856.5
ENST00000498499.1
ENST00000682506.1
ENST00000683124.1
ENST00000683592.1
ENST00000684186.1
ENST00000684276.1
CDS CAA 72 bp ACCAGGCTCTGGAAGTCAGCACTGCCCGGGATGCAGTaGCGTCCTGAGAAGCCGTCGCTGCAGCGGATGCAC +
Preference number: 6 (lower is better)
Translates to: TRLWKSALPGMQ*RPEKPSLQRMH
Trigger: GTGCATCCGCTGCAGCGACGGCTTCTCAGGACGCAACTGCATCCCGGGCAGTGCTGACTTCCAGAGCCTGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000240874.7
ENST00000354186.8
ENST00000360013.7
ENST00000460856.5
ENST00000498499.1
ENST00000682506.1
ENST00000683124.1
ENST00000683592.1
ENST00000684186.1
ENST00000684276.1
CDS CAA 72 bp CGGGTGGAGTGCAGCTTGTCCAGGAGACTGGTGATCTaGGGCACCAGGCTCTGGAAGTCAGCACTGCCCGGG +
Preference number: 6 (lower is better)
Translates to: RVECSLSRRLVI*GTRLWKSALPG
Trigger: CCCGGGCAGTGCTGACTTCCAGAGCCTGGTGCCCAAGATCACCAGTCTCCTGGACAAGCTGCACTCCACCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000240874.7
ENST00000354186.8
ENST00000360013.7
ENST00000460856.5
ENST00000498499.1
ENST00000682506.1
ENST00000683124.1
ENST00000683592.1
ENST00000684186.1
ENST00000684276.1
CDS CAA 72 bp TCTGAGGATGGGGTGCGCCCAGACCACAAGGCGAATTaGCAGGGATCGCCCTCCACGTGCTCGGTCACACCC +
Preference number: 6 (lower is better)
Translates to: SEDGVRPDHKAN*QGSPSTCSVTP
Trigger: GGGTGTGACCGAGCACGTGGAGGGCGATCCCTGCAAATTCGCCTTGTGGTCTGGGCGCACCCCATCCTCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000240874.7
ENST00000354186.8
ENST00000360013.7
ENST00000460856.5
ENST00000473056.1
ENST00000682277.1
ENST00000682506.1
ENST00000682540.1
ENST00000682575.1
ENST00000682695.1
ENST00000683146.1
ENST00000683356.1
ENST00000683592.1
ENST00000684276.1
ENST00000684360.1
ENST00000684374.1
ENST00000684382.1
ENST00000684410.1
CDS CAA 90 bp GGCACTTACTTGATGCTCCCGTCACTACTTTCTGCTGCTGTGGCTTaGGTGAGGGGCGCCAGGATGCTGCCTGGGACCCAGCCCTCGGCG +
Preference number: 6 (lower is better)
Translates to: GTYLMLPSLLSAAVA*VRGARMLPGTQPSA
Trigger: CGCCGAGGGCTGGGTCCCAGGCAGCATCCTGGCGCCCCTCACCAAAGCCACAGCAGCAGAAAGTAGTGACGGGAGCATCAAGTAAGTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393496.5
ENST00000459915.2
ENST00000682363.1
ENST00000683592.1
ENST00000684360.1
CDS CAA 90 bp ATCTCCTGGAGGTCCTCGAGGCGCGAGAGCAGGTGCACGGCGCTGTaGAAGAACTCCTCCAGGGAGAGCCGCAGTTCGATCCACTCCTCA +
Preference number: 6 (lower is better)
Translates to: ISWRSSRRESRCTAL*KNSSRESRSSIHSS
Trigger: TGAGGAGTGGATCGAACTGCGGCTCTCCCTGGAGGAGTTCTTCAACAGCGCCGTGCACCTGCTCTCGCGCCTCGAGGACCTCCAGGAGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000240874.7
ENST00000354186.8
ENST00000360013.7
ENST00000460856.5
ENST00000498499.1
ENST00000682506.1
ENST00000683124.1
ENST00000683592.1
ENST00000684186.1
ENST00000684276.1
CDS CAA 90 bp AGGTGCTGCCGGGTGGAGTGCAGCTTGTCCAGGAGACTGGTGATCTaGGGCACCAGGCTCTGGAAGTCAGCACTGCCCGGGATGCAGTTG +
Preference number: 6 (lower is better)
Translates to: RCCRVECSLSRRLVI*GTRLWKSALPGMQL
Trigger: CAACTGCATCCCGGGCAGTGCTGACTTCCAGAGCCTGGTGCCCAAGATCACCAGTCTCCTGGACAAGCTGCACTCCACCCGGCAGCACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000240874.7
ENST00000354186.8
ENST00000360013.7
ENST00000460856.5
ENST00000498499.1
ENST00000682506.1
ENST00000683124.1
ENST00000683592.1
ENST00000684186.1
ENST00000684276.1
CDS CAA 90 bp CATGACTTCTTGATGCTCCCGTCACTACTTTCTGCTGCTGTGGCTTaGGTGAGGGGCGCCAGGATGCTGCCTGGGACCCAGCCCTCGGCG +
Preference number: 6 (lower is better)
Translates to: HDFLMLPSLLSAAVA*VRGARMLPGTQPSA
Trigger: CGCCGAGGGCTGGGTCCCAGGCAGCATCCTGGCGCCCCTCACCAAAGCCACAGCAGCAGAAAGTAGTGACGGGAGCATCAAGAAGTCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
ENST00000682290.1
ENST00000682506.1
CDS TCA 72 bp AGGTGGGTTATAGCTGGAGCCCTTTGGGGGCTTCTCTaGGCCCGCAGGAACAGAGGAGTAGGGCCTGGGGCT +
Preference number: 6 (lower is better)
Translates to: RWVIAGALWGLL*ARRNRGVGPGA
Trigger: AGCCCCAGGCCCTACTCCTCTGTTCCTGCGGGCTCAGAGAAGCCCCCAAAGGGCTCCAGCTATAACCCACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
ENST00000393496.5
ENST00000459915.2
ENST00000682290.1
ENST00000682363.1
ENST00000682506.1
ENST00000683592.1
ENST00000684360.1
CDS GCA 72 bp CCGGCCTGGAGCAGCACCTCGGCTTTCTGCTGTACCTaGAGGGCACTCTGGTGCGTCTTCTGCAAGGAAGTG +
Preference number: 6 (lower is better)
Translates to: PAWSSTSAFCCT*RALWCVFCKEV
Trigger: CACTTCCTTGCAGAAGACGCACCAGAGTGCCCTGCAGGTACAGCAGAAAGCCGAGGTGCTGCTCCAGGCCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000240874.7
ENST00000360013.7
ENST00000393501.5
ENST00000484224.6
ENST00000682277.1
ENST00000682506.1
ENST00000682540.1
ENST00000682674.1
ENST00000682695.1
ENST00000683146.1
ENST00000683922.1
ENST00000684186.1
ENST00000684276.1
ENST00000684374.1
CDS GCA 72 bp TTTTGCTGTCCGGAAAAAGGCGTCCACGTCCGAGTCTaGTGCTCCTCCTTCCTCCGCTGCTCCCTCAGGGGG +
Preference number: 6 (lower is better)
Translates to: FCCPEKGVHVRV*CSSFLRCSLRG
Trigger: CCCCCTGAGGGAGCAGCGGAGGAAGGAGGAGCAGCAGACTCGGACGTGGACGCCTTTTTCCGGACAGCAAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000682861.1
CDS CCA 72 bp AGCCAGCGGAGAATCACGGAGGTGCAGCTTCTCTCCTaGGCAATGGGGCGGTTAGGGGCTGCTGGAACACCT +
Preference number: 6 (lower is better)
Translates to: SQRRITEVQLLS*AMGRLGAAGTP
Trigger: AGGTGTTCCAGCAGCCCCTAACCGCCCCATTGCCCAGGAGAGAAGCTGCACCTCCGTGATTCTCCGCTGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
ENST00000682290.1
ENST00000682506.1
CDS TCA 72 bp TTGCGGTGCTGCCAGATGCTCTCCAGCCGTCGCTGGTaGTGTAACACCTCATGCACCACGTCCAGCACCTGG +
Preference number: 6 (lower is better)
Translates to: LRCCQMLSSRRW*CNTSCTTSSTW
Trigger: CCAGGTGCTGGACGTGGTGCATGAGGTGTTACATCACCAGCGACGGCTGGAGAGCATCTGGCAGCACCGCAA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000240874.7
ENST00000354186.8
ENST00000360013.7
ENST00000460856.5
ENST00000682506.1
ENST00000683124.1
ENST00000683592.1
ENST00000684186.1
ENST00000684276.1
CDS TCA 72 bp ACTCCTCCGTCAGCTGGGAGGGGTCCACCAGCTTTGTaGGGCCCTCCACAGATACCATGCTCGTCTGGAAGG +
Preference number: 6 (lower is better)
Translates to: TPPSAGRGPPAL*GPPQIPCSSGR
Trigger: CCTTCCAGACGAGCATGGTATCTGTGGAGGGCCTCACAAAGCTGGTGGACCCCTCCCAGCTGACGGAGGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498499.1
CDS GCA 72 bp GTGAGGGATTCGGAGTTCCCAGGGCTCAGGGGCCGCTaGAGCACATCAAGTAGTGCTTTGCCATCCTGGCTG +
Preference number: 6 (lower is better)
Translates to: VRDSEFPGLRGR*STSSSALPSWL
Trigger: CAGCCAGGATGGCAAAGCACTACTTGATGTGCTGCAGCGGCCCCTGAGCCCTGGGAACTCCGAATCCCTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000240874.7
ENST00000354186.8
ENST00000360013.7
ENST00000460856.5
ENST00000682506.1
ENST00000683124.1
ENST00000683592.1
ENST00000684186.1
ENST00000684276.1
CDS GCA 72 bp GCTTCCGCTGCTCCACCCTGCGCACGAAGTCTTGGATaGGCACCTCCAGGTGTCGAGCTGCCTTGTAGATCT +
Preference number: 6 (lower is better)
Translates to: ASAAPPCARSLG*APPGVELPCRS
Trigger: AGATCTACAAGGCAGCTCGACACCTGGAGGTGCGCATCCAAGACTTCGTGCGCAGGGTGGAGCAGCGGAAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 24 transcripts:
ENST00000240874.7
ENST00000354186.8
ENST00000360013.7
ENST00000393501.5
ENST00000439170.2
ENST00000460856.5
ENST00000484224.6
ENST00000522553.6
ENST00000682277.1
ENST00000682506.1
ENST00000682540.1
ENST00000682575.1
ENST00000682636.1
ENST00000682674.1
ENST00000682695.1
ENST00000683124.1
ENST00000683512.1
ENST00000683592.1
ENST00000683827.1
ENST00000684186.1
ENST00000684276.1
ENST00000684374.1
ENST00000684382.1
ENST00000684410.1
CDS CAA 72 bp GAGAAGCTTCCGCTGCTCCACCCTGCGCACGAAGTCTaGGATGCGCACCTCCAGGTGTCGAGCTGCCTTGTA +
Preference number: 6 (lower is better)
Translates to: EKLPLLHPAHEV*DAHLQVSSCLV
Trigger: TACAAGGCAGCTCGACACCTGGAGGTGCGCATCCAAGACTTCGTGCGCAGGGTGGAGCAGCGGAAGCTTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 24 transcripts:
ENST00000240874.7
ENST00000354186.8
ENST00000360013.7
ENST00000393501.5
ENST00000439170.2
ENST00000460856.5
ENST00000484224.6
ENST00000522553.6
ENST00000682277.1
ENST00000682506.1
ENST00000682540.1
ENST00000682575.1
ENST00000682636.1
ENST00000682674.1
ENST00000682695.1
ENST00000683124.1
ENST00000683512.1
ENST00000683592.1
ENST00000683827.1
ENST00000684186.1
ENST00000684276.1
ENST00000684374.1
ENST00000684382.1
ENST00000684410.1
CDS CAA 72 bp TTGATGCTCCCGTCACTACTTTCTGCTGCTGTGGCTTaGGTGAGGGGCGCCAGGATGCTGCCTGGGACCCAG +
Preference number: 6 (lower is better)
Translates to: LMLPSLLSAAVA*VRGARMLPGTQ
Trigger: CTGGGTCCCAGGCAGCATCCTGGCGCCCCTCACCAAAGCCACAGCAGCAGAAAGTAGTGACGGGAGCATCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
ENST00000393496.5
ENST00000459915.2
ENST00000682290.1
ENST00000682363.1
ENST00000682506.1
ENST00000683592.1
ENST00000684360.1
CDS CAA 90 bp CATGTCCAGGAGAAGCTTCCGCTGCTCCACCCTGCGCACGAAGTCTaGGATGCGCACCTCCAGGTGTCGAGCTGCCTTGTAGATCTCCTC +
Preference number: 6 (lower is better)
Translates to: HVQEKLPLLHPAHEV*DAHLQVSSCLVDLL
Trigger: GAGGAGATCTACAAGGCAGCTCGACACCTGGAGGTGCGCATCCAAGACTTCGTGCGCAGGGTGGAGCAGCGGAAGCTTCTCCTGGACATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 24 transcripts:
ENST00000240874.7
ENST00000354186.8
ENST00000360013.7
ENST00000393501.5
ENST00000439170.2
ENST00000460856.5
ENST00000484224.6
ENST00000522553.6
ENST00000682277.1
ENST00000682506.1
ENST00000682540.1
ENST00000682575.1
ENST00000682636.1
ENST00000682674.1
ENST00000682695.1
ENST00000683124.1
ENST00000683512.1
ENST00000683592.1
ENST00000683827.1
ENST00000684186.1
ENST00000684276.1
ENST00000684374.1
ENST00000684382.1
ENST00000684410.1
CDS GCA 72 bp GGCCGGAATCACTTGACGCTGGGCTCGCACACAGCCTaGTCTAAGCAAATGCCTGCCTGCAAAGACAGCCAC +
Preference number: 6 (lower is better)
Translates to: GRNHLTLGSHTA*SKQMPACKDSH
Trigger: GTGGCTGTCTTTGCAGGCAGGCATTTGCTTAGAGCAGGCTGTGTGCGAGCCCAGCGTCAAGTGATTCCGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240874.7
ENST00000460856.5
ENST00000488825.5
CDS GCA 72 bp GACCACAAGGCGAATTTGCAGGGATCGCCCTCCACGTaGTCGGTCACACCCAGCTCTGAGGTCAGTAGCTTG +
Preference number: 6 (lower is better)
Translates to: DHKANLQGSPST*SVTPSSEVSSL
Trigger: CAAGCTACTGACCTCAGAGCTGGGTGTGACCGAGCACGTGGAGGGCGATCCCTGCAAATTCGCCTTGTGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000240874.7
ENST00000354186.8
ENST00000360013.7
ENST00000460856.5
ENST00000473056.1
ENST00000682506.1
ENST00000682540.1
ENST00000682575.1
ENST00000682695.1
ENST00000683146.1
ENST00000683592.1
ENST00000684276.1
ENST00000684360.1
ENST00000684374.1
ENST00000684382.1
ENST00000684410.1
CDS GCA 72 bp CTTTCACCAAGGGGAAGAAGCAGTCCATCTCCACGCTaGTTCGGGAGTGTGAGATGCACAGGGCGCTGCTGG +
Preference number: 6 (lower is better)
Translates to: LSPRGRSSPSPR*FGSVRCTGRCW
Trigger: CCAGCAGCGCCCTGTGCATCTCACACTCCCGAAGCAGCGTGGAGATGGACTGCTTCTTCCCCTTGGTGAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000354186.8
ENST00000360013.7
ENST00000393496.5
ENST00000471431.1
ENST00000682506.1
ENST00000683592.1
ENST00000684360.1
CDS GCA 72 bp GGCCGGAATCACTTGACGCTGGGCTCGCACACAGCCTaGTCTAAGCAAATGCCTGCCTGGCCTGGATCAAGT +
Preference number: 6 (lower is better)
Translates to: GRNHLTLGSHTA*SKQMPAWPGSS
Trigger: ACTTGATCCAGGCCAGGCAGGCATTTGCTTAGAGCAGGCTGTGTGCGAGCCCAGCGTCAAGTGATTCCGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477496.5
CDS CCA 72 bp AGGATGGCTTTCACTTGTTGCTCGGGTCCCCGAGTGTaGCTGGCGACACTGGGCATGCTGACGTTGTTCCTG +
Preference number: 6 (lower is better)
Translates to: RMAFTCCSGPRV*LATLGMLTLFL
Trigger: CAGGAACAACGTCAGCATGCCCAGTGTCGCCAGCCACACTCGGGGACCCGAGCAACAAGTGAAAGCCATCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 21 transcripts:
ENST00000240874.7
ENST00000354186.8
ENST00000360013.7
ENST00000393501.5
ENST00000460856.5
ENST00000484224.6
ENST00000682277.1
ENST00000682506.1
ENST00000682540.1
ENST00000682575.1
ENST00000682674.1
ENST00000682695.1
ENST00000683146.1
ENST00000683356.1
ENST00000683592.1
ENST00000683922.1
ENST00000684186.1
ENST00000684276.1
ENST00000684374.1
ENST00000684382.1
ENST00000684410.1
CDS CCA 72 bp GGACTTATCTCACGTCTAGCCCGAGGCATTTCCCACTaGAAAGCTCTGCCCATGCTGACCTGGCCTCGCTGG +
Preference number: 6 (lower is better)
Translates to: GLISRLARGISH*KALPMLTWPRW
Trigger: CCAGCGAGGCCAGGTCAGCATGGGCAGAGCTTTCCAGTGGGAAATGCCTCGGGCTAGACGTGAGATAAGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439170.2
ENST00000682636.1
CDS CCA 72 bp TGCAGGCGGGCACCAGCTAGGTGCCTCATCCACCCCTaGGATTTCTCAGAGGTGCAGTGTCCCTGGAAAGAA +
Preference number: 6 (lower is better)
Translates to: CRRAPARCLIHP*DFSEVQCPWKE
Trigger: TTCTTTCCAGGGACACTGCACCTCTGAGAAATCCCAGGGGTGGATGAGGCACCTAGCTGGTGCCCGCCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000682540.1
ENST00000684410.1
CDS CAA 72 bp CGACGCACAGGACTCGTCAGCCACTTCTTAAGAGTGTaGGTGGAGCGCTTGGGACCCGGGGAACTGTGGATG +
Preference number: 6 (lower is better)
Translates to: RRTGLVSHFLRV*VERLGPGELWM
Trigger: CATCCACAGTTCCCCGGGTCCCAAGCGCTCCACCAACACTCTTAAGAAGTGGCTGACGAGTCCTGTGCGTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
ENST00000393496.5
ENST00000454902.1
ENST00000471431.1
ENST00000682290.1
ENST00000682363.1
ENST00000682506.1
ENST00000683592.1
ENST00000684360.1
CDS CAA 90 bp TGCTCGGGTCCCCGAGTGTGGCTGGCGACACTGGGCATGCTGACGTaGTTCCTGTGGATGTACTTGAGAAACACCTCAGCATTCCGCCGA +
Preference number: 6 (lower is better)
Translates to: CSGPRVWLATLGMLT*FLWMYLRNTSAFRR
Trigger: TCGGCGGAATGCTGAGGTGTTTCTCAAGTACATCCACAGGAACAACGTCAGCATGCCCAGTGTCGCCAGCCACACTCGGGGACCCGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 21 transcripts:
ENST00000240874.7
ENST00000354186.8
ENST00000360013.7
ENST00000393501.5
ENST00000460856.5
ENST00000484224.6
ENST00000682277.1
ENST00000682506.1
ENST00000682540.1
ENST00000682575.1
ENST00000682674.1
ENST00000682695.1
ENST00000683146.1
ENST00000683356.1
ENST00000683592.1
ENST00000683922.1
ENST00000684186.1
ENST00000684276.1
ENST00000684374.1
ENST00000684382.1
ENST00000684410.1
CDS CAA 90 bp GTTTTATTGTCTGAGGATGGGGTGCGCCCAGACCACAAGGCGAATTaGCAGGGATCGCCCTCCACGTGCTCGGTCACACCCAGCTCTGAG +
Preference number: 6 (lower is better)
Translates to: VLLSEDGVRPDHKAN*QGSPSTCSVTPSSE
Trigger: CTCAGAGCTGGGTGTGACCGAGCACGTGGAGGGCGATCCCTGCAAATTCGCCTTGTGGTCTGGGCGCACCCCATCCTCAGACAATAAAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 18 transcripts:
ENST00000240874.7
ENST00000354186.8
ENST00000360013.7
ENST00000460856.5
ENST00000473056.1
ENST00000682277.1
ENST00000682506.1
ENST00000682540.1
ENST00000682575.1
ENST00000682695.1
ENST00000683146.1
ENST00000683356.1
ENST00000683592.1
ENST00000684276.1
ENST00000684360.1
ENST00000684374.1
ENST00000684382.1
ENST00000684410.1
CDS CAA 90 bp CTGTTAAGCCGACGCACAGGACTCGTCAGCCACTTCTTAAGAGTGTaGGTGGAGCGCTTGGGACCCGGGGAACTGTGGATGGAGTTCAGG +
Preference number: 6 (lower is better)
Translates to: LLSRRTGLVSHFLRV*VERLGPGELWMEFR
Trigger: CCTGAACTCCATCCACAGTTCCCCGGGTCCCAAGCGCTCCACCAACACTCTTAAGAAGTGGCTGACGAGTCCTGTGCGTCGGCTTAACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
ENST00000393496.5
ENST00000454902.1
ENST00000471431.1
ENST00000682290.1
ENST00000682363.1
ENST00000682506.1
ENST00000683592.1
ENST00000684360.1
CDS TCA 72 bp ACTCCTCCGTCAGCTGGGAGGGGTCCACCAGCTTTGTaGGGCCCTCCACAGATACCATGCTCGTCTCAAAGA +
Preference number: 6 (lower is better)
Translates to: TPPSAGRGPPAL*GPPQIPCSSQR
Trigger: TCTTTGAGACGAGCATGGTATCTGTGGAGGGCCTCACAAAGCTGGTGGACCCCTCCCAGCTGACGGAGGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000240874.7
ENST00000354186.8
ENST00000360013.7
ENST00000460856.5
ENST00000682506.1
ENST00000683124.1
ENST00000683592.1
ENST00000684186.1
ENST00000684276.1
CDS TCA 72 bp CCACATGGAGGGGTGAGAAGCTGCCACCCAGGAGGCTaGGAAATCAGCCTCATCTCTCCACAGGCTCCAGAA +
Preference number: 6 (lower is better)
Translates to: PHGGVRSCHPGG*EISLISPQAPE
Trigger: TTCTGGAGCCTGTGGAGAGATGAGGCTGATTTCTCAGCCTCCTGGGTGGCAGCTTCTCACCCCTCCATGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448253.6
CDS TCA 72 bp CACTCAGGACCAATGCTGCTGCGGCTTCATAGGCCCTaGAATGGCTCCCTACCCTGCTTGTCCTGGTTGGTG +
Preference number: 6 (lower is better)
Translates to: HSGPMLLRLHRP*NGSLPCLSWLV
Trigger: CACCAACCAGGACAAGCAGGGTAGGGAGCCATTTCAGGGCCTATGAAGCCGCAGCAGCATTGGTCCTGAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684410.1
CDS GCA 72 bp GCATCTCGGATGGCAGACCACCTTCACTGCACATCTTaGACCAGGCATCCACTCCCGACAGGAACTGCTCAG +
Preference number: 6 (lower is better)
Translates to: ASRMADHLHCTS*TRHPLPTGTAQ
Trigger: CTGAGCAGTTCCTGTCGGGAGTGGATGCCTGGTGCAAGATGTGCAGTGAAGGTGGTCTGCCATCCGAGATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000240874.7
ENST00000354186.8
ENST00000360013.7
ENST00000460856.5
ENST00000682506.1
ENST00000683124.1
ENST00000683592.1
ENST00000684186.1
ENST00000684276.1
CDS GCA 72 bp AGGGCTGGGCCTGCAGGTTGGCCACGGACTCGGACTTaGCTCCATTCTCGCTTGAGGAATGAGAGTATGCAT +
Preference number: 6 (lower is better)
Translates to: RAGPAGWPRTRT*LHSRLRNESMH
Trigger: ATGCATACTCTCATTCCTCAAGCGAGAATGGAGGCAAGTCCGAGTCCGTGGCCAACCTGCAGGCCCAGCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
ENST00000393496.5
ENST00000454902.1
ENST00000471431.1
ENST00000682290.1
ENST00000682363.1
ENST00000682506.1
ENST00000683592.1
ENST00000684360.1
CDS GCA 72 bp AGGCACTTACTTGATGCTCCCGTCACTACTTTCTGCTaGTGTGGCTTTGGTGAGGGGCGCCAGGATGCTGCC +
Preference number: 6 (lower is better)
Translates to: RHLLDAPVTTFC*CGFGEGRQDAA
Trigger: GGCAGCATCCTGGCGCCCCTCACCAAAGCCACAGCAGCAGAAAGTAGTGACGGGAGCATCAAGTAAGTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393496.5
ENST00000459915.2
ENST00000682363.1
ENST00000683592.1
ENST00000684360.1
CDS CCA 72 bp TTTTCAATCCAGTCCAACACCTGCTGTACATCCTGCTaGAAGACGCAGAGCTGCAGCCGCTGGTGGAGCCGC +
Preference number: 6 (lower is better)
Translates to: FSIQSNTCCTSC*KTQSCSRWWSR
Trigger: GCGGCTCCACCAGCGGCTGCAGCTCTGCGTCTTCCAGCAGGATGTACAGCAGGTGTTGGACTGGATTGAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000240874.7
ENST00000354186.8
ENST00000360013.7
ENST00000439170.2
ENST00000460856.5
ENST00000682506.1
ENST00000683124.1
ENST00000683592.1
ENST00000684186.1
ENST00000684276.1
CDS CCA 72 bp GCTGATGAGGGGAATGACATGGTCGATCTCTGCTGCTaGCCCCAGCTTATCTCGTCCACCACACCAGTCCTC +
Preference number: 6 (lower is better)
Translates to: ADEGNDMVDLCC*PQLISSTTPVL
Trigger: GAGGACTGGTGTGGTGGACGAGATAAGCTGGGGCCAGCAGCAGAGATCGACCATGTCATTCCCCTCATCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 20 transcripts:
ENST00000240874.7
ENST00000354186.8
ENST00000360013.7
ENST00000393501.5
ENST00000460856.5
ENST00000484224.6
ENST00000682277.1
ENST00000682506.1
ENST00000682540.1
ENST00000682575.1
ENST00000682674.1
ENST00000682695.1
ENST00000683146.1
ENST00000683356.1
ENST00000683592.1
ENST00000683922.1
ENST00000684186.1
ENST00000684374.1
ENST00000684382.1
ENST00000684410.1
CDS CCA 72 bp CATCCACCCAAATTGGCTTGTGAGAATGCTGCAGGGTaGGAGTGGATGACAGGTGGGGACGCAGCTCCGGAA +
Preference number: 6 (lower is better)
Translates to: HPPKLACENAAG*EWMTGGDAAPE
Trigger: TTCCGGAGCTGCGTCCCCACCTGTCATCCACTCCCACCCTGCAGCATTCTCACAAGCCAATTTGGGTGGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484542.1
CDS CCA 72 bp TTGAGAGCTGGCTGTACTTTCTGCTTCCCGCTATTCTaGCCCATGGTGGGCCCTTCTGGTCCACTCCAGGTG +
Preference number: 6 (lower is better)
Translates to: LRAGCTFCFPLF*PMVGPSGPLQV
Trigger: CACCTGGAGTGGACCAGAAGGGCCCACCATGGGCCAGAATAGCGGGAAGCAGAAAGTACAGCCAGCTCTCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684410.1
CDS CAA 72 bp CTCGTCAGCCACTTCTTAAGAGTGTTGGTGGAGCGCTaGGGACCCGGGGAACTGTGGATGGAGTTCAGGGAG +
Preference number: 6 (lower is better)
Translates to: LVSHFLRVLVER*GPGELWMEFRE
Trigger: CTCCCTGAACTCCATCCACAGTTCCCCGGGTCCCAAGCGCTCCACCAACACTCTTAAGAAGTGGCTGACGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
ENST00000393496.5
ENST00000454902.1
ENST00000471431.1
ENST00000682290.1
ENST00000682363.1
ENST00000682506.1
ENST00000683592.1
ENST00000684360.1
CDS CAA 72 bp CAGCCTCCCAGGTCGTTCTGCTTGCTGGCTTCGAACTaGTCCCCAGGCTGGTGGTATTCAAACCCTGGACTG +
Preference number: 6 (lower is better)
Translates to: QPPRSFCLLASN*SPGWWYSNPGL
Trigger: CAGTCCAGGGTTTGAATACCACCAGCCTGGGGACAAGTTCGAAGCCAGCAAGCAGAACGACCTGGGAGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS CAA 72 bp TGGAGGCTGGAAGTCCAAGATCAAGGTCGAGCAGGGTaGGCTTCCTCTGATGCTCCTCCCTTTGGCCTGCAG +
Preference number: 6 (lower is better)
Translates to: WRLEVQDQGRAG*ASSDAPPFGLQ
Trigger: CTGCAGGCCAAAGGGAGGAGCATCAGAGGAAGCCAACCCTGCTCGACCTTGATCTTGGACTTCCAGCCTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683280.1
CDS CAA 90 bp TCTAGGTCTTGCATCTCGGATGGCAGACCACCTTCACTGCACATCTaGCACCAGGCATCCACTCCCGACAGGAACTGCTCAGCCTTCTGG +
Preference number: 6 (lower is better)
Translates to: SRSCISDGRPPSLHI*HQASTPDRNCSAFW
Trigger: CCAGAAGGCTGAGCAGTTCCTGTCGGGAGTGGATGCCTGGTGCAAGATGTGCAGTGAAGGTGGTCTGCCATCCGAGATGCAAGACCTAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000240874.7
ENST00000354186.8
ENST00000360013.7
ENST00000460856.5
ENST00000682506.1
ENST00000683124.1
ENST00000683592.1
ENST00000684186.1
ENST00000684276.1
CDS CAA 90 bp TCTGGACCCTTCCAAGTGATGGTGGGCTTTGGCCGCCCACAGACTTaGCACTGCAGTATCACTGTGTCCCCAAGCAAGCAGGTCACATCC +
Preference number: 6 (lower is better)
Translates to: SGPFQVMVGFGRPQT*HCSITVSPSKQVTS
Trigger: GGATGTGACCTGCTTGCTTGGGGACACAGTGATACTGCAGTGCAAAGTCTGTGGGCGGCCAAAGCCCACCATCACTTGGAAGGGTCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
ENST00000682290.1
ENST00000682506.1
CDS TCA 72 bp CTGGTCCAGCTGGGTGGAGATCTGCTTGATTTGTTGTaGGGCATAATGACCGGCCTCAGAGAGGCGGGAAGC +
Preference number: 6 (lower is better)
Translates to: LVQLGGDLLDLL*GIMTGLREAGS
Trigger: GCTTCCCGCCTCTCTGAGGCCGGTCATTATGCCTCACAACAAATCAAGCAGATCTCCACCCAGCTGGACCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000240874.7
ENST00000354186.8
ENST00000360013.7
ENST00000460856.5
ENST00000682506.1
ENST00000683124.1
ENST00000683592.1
ENST00000684186.1
ENST00000684276.1
CDS GCA 72 bp CTAGGTCTTGCATCTCGGATGGCAGACCACCTTCACTaGACATCTTGCACCAGGCATCCACTCCCGACAGGA +
Preference number: 6 (lower is better)
Translates to: LGLASRMADHLH*TSCTRHPLPTG
Trigger: TCCTGTCGGGAGTGGATGCCTGGTGCAAGATGTGCAGTGAAGGTGGTCTGCCATCCGAGATGCAAGACCTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000240874.7
ENST00000354186.8
ENST00000360013.7
ENST00000460856.5
ENST00000682506.1
ENST00000683124.1
ENST00000683592.1
ENST00000684186.1
ENST00000684276.1
CDS GCA 72 bp ATGTTGTTCATGGCTAGCTTCCGTTCTGTGTGGCGCTaGAGCCGCTGTTCTGCCAGGGTTAGGTCCTCTGTG +
Preference number: 6 (lower is better)
Translates to: MLFMASFRSVWR*SRCSARVRSSV
Trigger: CACAGAGGACCTAACCCTGGCAGAACAGCGGCTGCAGCGCCACACAGAACGGAAGCTAGCCATGAACAACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 21 transcripts:
ENST00000240874.7
ENST00000354186.8
ENST00000360013.7
ENST00000393501.5
ENST00000460856.5
ENST00000484224.6
ENST00000682277.1
ENST00000682506.1
ENST00000682540.1
ENST00000682575.1
ENST00000682674.1
ENST00000682695.1
ENST00000683146.1
ENST00000683356.1
ENST00000683592.1
ENST00000683922.1
ENST00000684186.1
ENST00000684276.1
ENST00000684374.1
ENST00000684382.1
ENST00000684410.1
CDS GCA 72 bp AGCGCCTGCTTAGCGCTGCGCTCGAACACCACATATTaGTGGCATTGGTCTAACCGCCGCTTCTTCAAGGTC +
Preference number: 6 (lower is better)
Translates to: SACLALRSNTTY*WHWSNRRFFKV
Trigger: GACCTTGAAGAAGCGGCGGTTAGACCAATGCCAGCAATATGTGGTGTTCGAGCGCAGCGCTAAGCAGGCGCT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 21 transcripts:
ENST00000240874.7
ENST00000354186.8
ENST00000360013.7
ENST00000393501.5
ENST00000460856.5
ENST00000484224.6
ENST00000682277.1
ENST00000682506.1
ENST00000682540.1
ENST00000682575.1
ENST00000682674.1
ENST00000682695.1
ENST00000683146.1
ENST00000683356.1
ENST00000683592.1
ENST00000683922.1
ENST00000684186.1
ENST00000684276.1
ENST00000684374.1
ENST00000684382.1
ENST00000684410.1
CDS GCA 72 bp GAACACGCGCCTCTCTTTGGTCCGGGACTGCATGCCTaGATCCAGCTCGATCACATAGAATGTGTCCTGCTG +
Preference number: 6 (lower is better)
Translates to: EHAPLFGPGLHA*IQLDHIECVLL
Trigger: CAGCAGGACACATTCTATGTGATCGAGCTGGATGCAGGCATGCAGTCCCGGACCAAAGAGAGGCGCGTGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
ENST00000393496.5
ENST00000459915.2
ENST00000682290.1
ENST00000682363.1
ENST00000682506.1
ENST00000683592.1
ENST00000684360.1
CDS GCA 72 bp TGCACCCAGGCCTGCTGGATGTCAGCGTTGGCGGCTTaGAGAACAACCCTCTCAGAAGTCTCTCTGTTCATG +
Preference number: 6 (lower is better)
Translates to: CTQACWMSALAA*RTTLSEVSLFM
Trigger: CATGAACAGAGAGACTTCTGAGAGGGTTGTTCTGCAAGCCGCCAACGCTGACATCCAGCAGGCCTGGGTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
ENST00000393496.5
ENST00000459915.2
ENST00000682290.1
ENST00000682363.1
ENST00000682506.1
ENST00000683592.1
ENST00000684360.1
CDS GCA 72 bp ACGAGGCACTTACTTGATGCTCCCGTCACTACTTTCTaGTGCTGTGGCTTTGGTGAGGGGCGCCAGGATGCT +
Preference number: 6 (lower is better)
Translates to: TRHLLDAPVTTF*CCGFGEGRQDA
Trigger: AGCATCCTGGCGCCCCTCACCAAAGCCACAGCAGCAGAAAGTAGTGACGGGAGCATCAAGTAAGTGCCTCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393496.5
ENST00000459915.2
ENST00000682363.1
ENST00000683592.1
ENST00000684360.1
CDS GCA 72 bp GATCTCCAGGTCCCAGGTGCCACCGAGGAACAAGGTTaGCATCCTGTTAAGAAAAGGGCCGGGCTCTGTGAT +
Preference number: 6 (lower is better)
Translates to: DLQVPGATEEQG*HPVKKRAGLCD
Trigger: ATCACAGAGCCCGGCCCTTTTCTTAACAGGATGGCAACCTTGTTCCTCGGTGGCACCTGGGACCTGGAGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000682540.1
ENST00000684374.1
CDS GCA 72 bp CACCCTTCTTTTGGCTACCACCTCACTCAGGACCAATaGTGCTGCGGCTTCATAGGCCCTGAAATGGCTCCC +
Preference number: 6 (lower is better)
Translates to: HPSFGYHLTQDQ*CCGFIGPEMAP
Trigger: GGGAGCCATTTCAGGGCCTATGAAGCCGCAGCAGCATTGGTCCTGAGTGAGGTGGTAGCCAAAAGAAGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684410.1
CDS GCA 72 bp CCATGCAGCACTGAGGAGGTGAACTTATCCTGGTCATaGAGGTCTTGGGGCTTCCGCCCCATGGAGGTTTCT +
Preference number: 6 (lower is better)
Translates to: PCSTEEVNLSWS*RSWGFRPMEVS
Trigger: AGAAACCTCCATGGGGCGGAAGCCCCAAGACCTGCATGACCAGGATAAGTTCACCTCCTCAGTGCTGCATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000684410.1
CDS CCA 72 bp GCTTGGGTCACCTGCTCATACAAGGTCTGGTGGTGGTaGATTGCCAGCTCTAGGTCTTGCATCTCGGATGGC +
Preference number: 6 (lower is better)
Translates to: AWVTCSYKVWWW*IASSRSCISDG
Trigger: GCCATCCGAGATGCAAGACCTAGAGCTGGCAATCCACCACCACCAGACCTTGTATGAGCAGGTGACCCAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000240874.7
ENST00000354186.8
ENST00000360013.7
ENST00000460856.5
ENST00000682506.1
ENST00000683124.1
ENST00000683592.1
ENST00000684186.1
ENST00000684276.1
CDS CCA 72 bp CCTGCAGGGCACTCTGGTGCGTCTTCTGCAAGGAAGTaGCATGAAAGAGGGACTCGATGGCCAGTTGGAACT +
Preference number: 6 (lower is better)
Translates to: PAGHSGASSARK*HERGTRWPVGT
Trigger: AGTTCCAACTGGCCATCGAGTCCCTCTTTCATGCCACTTCCTTGCAGAAGACGCACCAGAGTGCCCTGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000240874.7
ENST00000360013.7
ENST00000393501.5
ENST00000484224.6
ENST00000682277.1
ENST00000682506.1
ENST00000682540.1
ENST00000682674.1
ENST00000682695.1
ENST00000683146.1
ENST00000683922.1
ENST00000684186.1
ENST00000684276.1
ENST00000684374.1
CDS CCA 72 bp GCCTGCTTAGCGCTGCGCTCGAACACCACATATTGCTaGCATTGGTCTAACCGCCGCTTCTTCAAGGTCCAG +
Preference number: 6 (lower is better)
Translates to: ACLALRSNTTYC*HWSNRRFFKVQ
Trigger: CTGGACCTTGAAGAAGCGGCGGTTAGACCAATGCCAGCAATATGTGGTGTTCGAGCGCAGCGCTAAGCAGGC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 21 transcripts:
ENST00000240874.7
ENST00000354186.8
ENST00000360013.7
ENST00000393501.5
ENST00000460856.5
ENST00000484224.6
ENST00000682277.1
ENST00000682506.1
ENST00000682540.1
ENST00000682575.1
ENST00000682674.1
ENST00000682695.1
ENST00000683146.1
ENST00000683356.1
ENST00000683592.1
ENST00000683922.1
ENST00000684186.1
ENST00000684276.1
ENST00000684374.1
ENST00000684382.1
ENST00000684410.1
CDS CCA 72 bp ATTGGAGACAGGGCCTGGTGGGAAGTTTTTGGGCCATaGGGGAGGATCCTTCATGGCTTGGTGCTGACCTTG +
Preference number: 6 (lower is better)
Translates to: IGDRAWWEVFGP*GRILHGLVLTL
Trigger: CAAGGTCAGCACCAAGCCATGAAGGATCCTCCCCCATGGCCCAAAAACTTCCCACCAGGCCCTGTCTCCAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000683280.1
CDS CAA 72 bp TGCATCTCGGATGGCAGACCACCTTCACTGCACATCTaGCACCAGGCATCCACTCCCGACAGGAACTGCTCA +
Preference number: 6 (lower is better)
Translates to: CISDGRPPSLHI*HQASTPDRNCS
Trigger: TGAGCAGTTCCTGTCGGGAGTGGATGCCTGGTGCAAGATGTGCAGTGAAGGTGGTCTGCCATCCGAGATGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000240874.7
ENST00000354186.8
ENST00000360013.7
ENST00000460856.5
ENST00000682506.1
ENST00000683124.1
ENST00000683592.1
ENST00000684186.1
ENST00000684276.1
CDS CAA 72 bp GGGTCACCTGCTCATACAAGGTCTGGTGGTGGTGGATaGCCAGCTCTAGGTCTTGCATCTCGGATGGCAGAC +
Preference number: 6 (lower is better)
Translates to: GSPAHTRSGGGG*PALGLASRMAD
Trigger: GTCTGCCATCCGAGATGCAAGACCTAGAGCTGGCAATCCACCACCACCAGACCTTGTATGAGCAGGTGACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000240874.7
ENST00000354186.8
ENST00000360013.7
ENST00000460856.5
ENST00000682506.1
ENST00000683124.1
ENST00000683592.1
ENST00000684186.1
ENST00000684276.1
CDS CAA 72 bp CTGCACCCAGGCCTGCTGGATGTCAGCGTTGGCGGCTaGCAGAACAACCCTCTCAGAAGTCTCTCTGTTCAT +
Preference number: 6 (lower is better)
Translates to: LHPGLLDVSVGG*QNNPLRSLSVH
Trigger: ATGAACAGAGAGACTTCTGAGAGGGTTGTTCTGCAAGCCGCCAACGCTGACATCCAGCAGGCCTGGGTGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
ENST00000393496.5
ENST00000459915.2
ENST00000682290.1
ENST00000682363.1
ENST00000682506.1
ENST00000683592.1
ENST00000684360.1
CDS CAA 72 bp CCTCCCTTTGGCCTGCAGATACAGATGGCTGCCTTCTaGTTGCCTCCTCACACAGTTGTCCCTCTGTGTCCC +
Preference number: 6 (lower is better)
Translates to: PPFGLQIQMAAF*LPPHTVVPLCP
Trigger: GGGACACAGAGGGACAACTGTGTGAGGAGGCAACAAGAAGGCAGCCATCTGTATCTGCAGGCCAAAGGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683280.1
CDS CAA 90 bp TGTAGGCTTGGGTCACCTGCTCATACAAGGTCTGGTGGTGGTGGATaGCCAGCTCTAGGTCTTGCATCTCGGATGGCAGACCACCTTCAC +
Preference number: 6 (lower is better)
Translates to: CRLGSPAHTRSGGGG*PALGLASRMADHLH
Trigger: GTGAAGGTGGTCTGCCATCCGAGATGCAAGACCTAGAGCTGGCAATCCACCACCACCAGACCTTGTATGAGCAGGTGACCCAAGCCTACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000240874.7
ENST00000354186.8
ENST00000360013.7
ENST00000460856.5
ENST00000682506.1
ENST00000683124.1
ENST00000683592.1
ENST00000684186.1
ENST00000684276.1
CDS CAA 90 bp TGCAGGGCCCGGGCTCGATGTAGGGACTTCCCAACTCCAGTGTGTTaGCTGAGAAAGGCCTCACCATGGTTTTCAATCCAGTCCAACACC +
Preference number: 6 (lower is better)
Translates to: CRARARCRDFPTPVC*LRKASPWFSIQSNT
Trigger: GGTGTTGGACTGGATTGAAAACCATGGTGAGGCCTTTCTCAGCAAACACACTGGAGTTGGGAAGTCCCTACATCGAGCCCGGGCCCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000240874.7
ENST00000354186.8
ENST00000360013.7
ENST00000439170.2
ENST00000460856.5
ENST00000682506.1
ENST00000683124.1
ENST00000683592.1
ENST00000684186.1
ENST00000684276.1
CDS CAA 90 bp CCCAACCTTTCTTGCTCTTCTCATCAGCGCTGTCTCCCTGAGGGGTaGTTTCATCCCCAGGCTTGGGAGATCCCAGGTCAAAGCTCTTCC +
Preference number: 6 (lower is better)
Translates to: PNLSCSSHQRCLPEG*FHPQAWEIPGQSSS
Trigger: GGAAGAGCTTTGACCTGGGATCTCCCAAGCCTGGGGATGAAACAACCCCTCAGGGAGACAGCGCTGATGAGAAGAGCAAGAAAGGTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
ENST00000393496.5
ENST00000454902.1
ENST00000682290.1
ENST00000684360.1
CDS CAA 90 bp GGGCCTGCAGGTTGGCCACGGACTCGGACTTGCCTCCATTCTCGCTaGAGGAATGAGAGTATGCATCTTTCACCAAGGGGAAGAAGCAGT +
Preference number: 6 (lower is better)
Translates to: GPAGWPRTRTCLHSR*RNESMHLSPRGRSS
Trigger: ACTGCTTCTTCCCCTTGGTGAAAGATGCATACTCTCATTCCTCAAGCGAGAATGGAGGCAAGTCCGAGTCCGTGGCCAACCTGCAGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000354186.8
ENST00000360013.7
ENST00000393496.5
ENST00000471431.1
ENST00000682290.1
ENST00000682506.1
ENST00000683592.1
ENST00000684360.1
CDS TCA 72 bp CAACCTTTCTTGCTCTTCTCATCAGCGCTGTCTCCCTaGGGGGTTGTTTCATCCCCAGGCTTGGGAGATCCC +
Preference number: 6 (lower is better)
Translates to: QPFLLFSSALSP*GVVSSPGLGDP
Trigger: GGGATCTCCCAAGCCTGGGGATGAAACAACCCCTCAGGGAGACAGCGCTGATGAGAAGAGCAAGAAAGGTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
ENST00000393496.5
ENST00000454902.1
ENST00000682290.1
ENST00000684360.1
CDS TCA 72 bp CAGTGTCAAGGATGTTCTGGTCTGGACCCTTCCAAGTaGTGGTGGGCTTTGGCCGCCCACAGACTTTGCACT +
Preference number: 6 (lower is better)
Translates to: QCQGCSGLDPSK*WWALAAHRLCT
Trigger: AGTGCAAAGTCTGTGGGCGGCCAAAGCCCACCATCACTTGGAAGGGTCCAGACCAGAACATCCTTGACACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
ENST00000682290.1
ENST00000682506.1
CDS TCA 72 bp TACTCCTCTCCCGGGGAAGCCAACGAGGCACTTACTTaGTGCTCCCGTCACTACTTTCTGCTGCTGTGGCTT +
Preference number: 6 (lower is better)
Translates to: YSSPGEANEALT*CSRHYFLLLWL
Trigger: AAGCCACAGCAGCAGAAAGTAGTGACGGGAGCATCAAGTAAGTGCCTCGTTGGCTTCCCCGGGAGAGGAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393496.5
ENST00000459915.2
ENST00000682363.1
ENST00000683592.1
ENST00000684360.1
CDS GCA 72 bp AAGGTCTGGTGGTGGTGGATTGCCAGCTCTAGGTCTTaGATCTCGGATGGCAGACCACCTTCACTGCACATC +
Preference number: 6 (lower is better)
Translates to: KVWWWWIASSRS*ISDGRPPSLHI
Trigger: GATGTGCAGTGAAGGTGGTCTGCCATCCGAGATGCAAGACCTAGAGCTGGCAATCCACCACCACCAGACCTT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000240874.7
ENST00000354186.8
ENST00000360013.7
ENST00000460856.5
ENST00000682506.1
ENST00000683124.1
ENST00000683592.1
ENST00000684186.1
ENST00000684276.1
CDS GCA 72 bp CATTGGTCTAACCGCCGCTTCTTCAAGGTCCAGAAATaGAGCACGCGATTCTCCCTCTGCAGGAGCTCACTC +
Preference number: 6 (lower is better)
Translates to: HWSNRRFFKVQK*STRFSLCRSSL
Trigger: GAGTGAGCTCCTGCAGAGGGAGAATCGCGTGCTGCATTTCTGGACCTTGAAGAAGCGGCGGTTAGACCAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 21 transcripts:
ENST00000240874.7
ENST00000354186.8
ENST00000360013.7
ENST00000393501.5
ENST00000460856.5
ENST00000484224.6
ENST00000682277.1
ENST00000682506.1
ENST00000682540.1
ENST00000682575.1
ENST00000682674.1
ENST00000682695.1
ENST00000683146.1
ENST00000683356.1
ENST00000683592.1
ENST00000683922.1
ENST00000684186.1
ENST00000684276.1
ENST00000684374.1
ENST00000684382.1
ENST00000684410.1
CDS GCA 72 bp GGCGTCCCGCAGCTTGACCTCCCGATCCGAAAGGCTTaGTGGGATAATATCCAGCTCCAGGTCCTTATTATC +
Preference number: 6 (lower is better)
Translates to: GVPQLDLPIRKA*WDNIQLQVLII
Trigger: GATAATAAGGACCTGGAGCTGGATATTATCCCAGCAAGCCTTTCGGATCGGGAGGTCAAGCTGCGGGACGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 20 transcripts:
ENST00000240874.7
ENST00000354186.8
ENST00000360013.7
ENST00000393501.5
ENST00000460856.5
ENST00000484224.6
ENST00000494648.1
ENST00000682277.1
ENST00000682506.1
ENST00000682540.1
ENST00000682575.1
ENST00000682695.1
ENST00000683146.1
ENST00000683356.1
ENST00000683592.1
ENST00000683922.1
ENST00000684276.1
ENST00000684374.1
ENST00000684382.1
ENST00000684410.1
CDS GCA 72 bp AGAGGAACACGCGCCTCTCTTTGGTCCGGGACTGCATaGCTGCATCCAGCTCGATCACATAGAATGTGTCCT +
Preference number: 6 (lower is better)
Translates to: RGTRASLWSGTA*LHPARSHRMCP
Trigger: AGGACACATTCTATGTGATCGAGCTGGATGCAGGCATGCAGTCCCGGACCAAAGAGAGGCGCGTGTTCCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
ENST00000393496.5
ENST00000459915.2
ENST00000682290.1
ENST00000682363.1
ENST00000682506.1
ENST00000683592.1
ENST00000684360.1
CDS GCA 72 bp TCTTTTGGCTACCACCTCACTCAGGACCAATGCTGCTaGGGCTTCATAGGCCCTGAAATGGCTCCCTACCCT +
Preference number: 6 (lower is better)
Translates to: SFGYHLTQDQCC*GFIGPEMAPYP
Trigger: AGGGTAGGGAGCCATTTCAGGGCCTATGAAGCCGCAGCAGCATTGGTCCTGAGTGAGGTGGTAGCCAAAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684410.1
CDS GCA 72 bp CCTTCTTTTGGCTACCACCTCACTCAGGACCAATGCTaGTGCGGCTTCATAGGCCCTGAAATGGCTCCCTAC +
Preference number: 6 (lower is better)
Translates to: PSFGYHLTQDQC*CGFIGPEMAPY
Trigger: GTAGGGAGCCATTTCAGGGCCTATGAAGCCGCAGCAGCATTGGTCCTGAGTGAGGTGGTAGCCAAAAGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684410.1
CDS GCA 72 bp CCTTTGGCCTGCAGATACAGATGGCTGCCTTCTTGTTaGCTCCTCACACAGTTGTCCCTCTGTGTCCCATGG +
Preference number: 6 (lower is better)
Translates to: PLACRYRWLPSC*LLTQLSLCVPW
Trigger: CCATGGGACACAGAGGGACAACTGTGTGAGGAGGCAACAAGAAGGCAGCCATCTGTATCTGCAGGCCAAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683280.1
CDS CCA 72 bp TTTCTGTTCTTCTTCTGGGTTTTTAGGAGGTGTGGGTaGGGCCATCCCCTCATTCAGGCAGCCTGCAGGGTC +
Preference number: 6 (lower is better)
Translates to: FLFFFWVFRRCG*GHPLIQAACRV
Trigger: GACCCTGCAGGCTGCCTGAATGAGGGGATGGCCCCACCCACACCTCCTAAAAACCCAGAAGAAGAACAGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
ENST00000393496.5
ENST00000454902.1
ENST00000459915.2
ENST00000682290.1
ENST00000682363.1
ENST00000682506.1
ENST00000683592.1
ENST00000684360.1
CDS CCA 72 bp GTTCTGGTCTGGACCCTTCCAAGTGATGGTGGGCTTTaGCCGCCCACAGACTTTGCACTGCAGTATCACTGT +
Preference number: 6 (lower is better)
Translates to: VLVWTLPSDGGL*PPTDFALQYHC
Trigger: ACAGTGATACTGCAGTGCAAAGTCTGTGGGCGGCCAAAGCCCACCATCACTTGGAAGGGTCCAGACCAGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
ENST00000682290.1
ENST00000682506.1
CDS CCA 72 bp GGCTCGCACACAGCCTGCTCTAAGCAAATGCCTGCCTaGCCTGGATCAAGTTTTTCAGCTCCATGTGCCTCA +
Preference number: 6 (lower is better)
Translates to: GSHTACSKQMPA*PGSSFSAPCAS
Trigger: TGAGGCACATGGAGCTGAAAAACTTGATCCAGGCCAGGCAGGCATTTGCTTAGAGCAGGCTGTGTGCGAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477496.5
CDS CCA 72 bp GTTCTGATGCCCTTCTTAACGCCCTCATCTCAAGTCTaGGCTCCCACTGGCCTGTTTCTCGGTGCTAGTGAG +
Preference number: 6 (lower is better)
Translates to: VLMPFLTPSSQV*APTGLFLGASE
Trigger: CTCACTAGCACCGAGAAACAGGCCAGTGGGAGCCCAGACTTGAGATGAGGGCGTTAAGAAGGGCATCAGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477496.5
CDS CCA 72 bp ATTTGTCCATGCAGCACTGAGGAGGTGAACTTATCCTaGTCATGCAGGTCTTGGGGCTTCCGCCCCATGGAG +
Preference number: 6 (lower is better)
Translates to: ICPCSTEEVNLS*SCRSWGFRPME
Trigger: CTCCATGGGGCGGAAGCCCCAAGACCTGCATGACCAGGATAAGTTCACCTCCTCAGTGCTGCATGGACAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000684410.1
CDS CCA 72 bp AGATCCAAGGAGTCCCATAGCCAGGAATCTATGGAGTaGAAGGTGCCGACGGTCCTCGATGGTGTACTGCTC +
Preference number: 6 (lower is better)
Translates to: RSKESHSQESME*KVPTVLDGVLL
Trigger: GAGCAGTACACCATCGAGGACCGTCGGCACCTTCCACTCCATAGATTCCTGGCTATGGGACTCCTTGGATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000683512.1
ENST00000683827.1
CDS CCA 72 bp CAGGAAGATCCAAGGAGTCCCATAGCCAGGAATCTATaGAGTGGAAGGTGCCGACGGTCCTCGATGGTGTAC +
Preference number: 6 (lower is better)
Translates to: QEDPRSPIARNL*SGRCRRSSMVY
Trigger: GTACACCATCGAGGACCGTCGGCACCTTCCACTCCATAGATTCCTGGCTATGGGACTCCTTGGATCTTCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000683512.1
ENST00000683827.1
CDS CAA 72 bp GGTTGGCCACGGACTCGGACTTGCCTCCATTCTCGCTaGAGGAATGAGAGTATGCATCTCTACACGGGAAGC +
Preference number: 6 (lower is better)
Translates to: GWPRTRTCLHSR*RNESMHLYTGS
Trigger: GCTTCCCGTGTAGAGATGCATACTCTCATTCCTCAAGCGAGAATGGAGGCAAGTCCGAGTCCGTGGCCAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000454902.1
ENST00000682363.1
CDS CAA 72 bp TCTTGCTCTTCTCATCAGCGCTGTCTCCCTGAGGGGTaGTTTCATCCCCAGGCTTGGGAGATCCCAGGTCAA +
Preference number: 6 (lower is better)
Translates to: SCSSHQRCLPEG*FHPQAWEIPGQ
Trigger: TTGACCTGGGATCTCCCAAGCCTGGGGATGAAACAACCCCTCAGGGAGACAGCGCTGATGAGAAGAGCAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
ENST00000393496.5
ENST00000454902.1
ENST00000682290.1
ENST00000684360.1
CDS CAA 72 bp TTCCAAGTGATGGTGGGCTTTGGCCGCCCACAGACTTaGCACTGCAGTATCACTGTGTCCCCAAGCAAGCAG +
Preference number: 6 (lower is better)
Translates to: FQVMVGFGRPQT*HCSITVSPSKQ
Trigger: CTGCTTGCTTGGGGACACAGTGATACTGCAGTGCAAAGTCTGTGGGCGGCCAAAGCCCACCATCACTTGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
ENST00000682290.1
ENST00000682506.1
CDS CAA 72 bp ATACTCCTCTCCCGGGGAAGCCAACGAGGCACTTACTaGATGCTCCCGTCACTACTTTCTGCTGCTGTGGCT +
Preference number: 6 (lower is better)
Translates to: ILLSRGSQRGTY*MLPSLLSAAVA
Trigger: AGCCACAGCAGCAGAAAGTAGTGACGGGAGCATCAAGTAAGTGCCTCGTTGGCTTCCCCGGGAGAGGAGTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393496.5
ENST00000459915.2
ENST00000682363.1
ENST00000683592.1
ENST00000684360.1
CDS CAA 72 bp CTTTCTTGCTCTCATCAGCGCTGTCTCCCTGAGGGGTaGTTTCATCCCCAGGCTTGGGAGATCCCAGGTCAA +
Preference number: 6 (lower is better)
Translates to: LSCSHQRCLPEG*FHPQAWEIPGQ
Trigger: TTGACCTGGGATCTCCCAAGCCTGGGGATGAAACAACCCCTCAGGGAGACAGCGCTGATGAGAGCAAGAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000682363.1
ENST00000682506.1
ENST00000683592.1
CDS CAA 72 bp CCCTTTGGCCTGCAGATACAGATGGCTGCCTTCTTGTaGCCTCCTCACACAGTTGTCCCTCTGTGTCCCATG +
Preference number: 6 (lower is better)
Translates to: PFGLQIQMAAFL*PPHTVVPLCPM
Trigger: CATGGGACACAGAGGGACAACTGTGTGAGGAGGCAACAAGAAGGCAGCCATCTGTATCTGCAGGCCAAAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683280.1
CDS CAA 90 bp TACTGGTGCAGATCCTGTCCCTGCTGGATAACCTCAAAGGTCATGTaGTTCATGGCTAGCTTCCGTTCTGTGTGGCGCTGCAGCCGCTGT +
Preference number: 6 (lower is better)
Translates to: YWCRSCPCWITSKVM*FMASFRSVWRCSRC
Trigger: ACAGCGGCTGCAGCGCCACACAGAACGGAAGCTAGCCATGAACAACATGACCTTTGAGGTTATCCAGCAGGGACAGGATCTGCACCAGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 21 transcripts:
ENST00000240874.7
ENST00000354186.8
ENST00000360013.7
ENST00000393501.5
ENST00000460856.5
ENST00000484224.6
ENST00000682277.1
ENST00000682506.1
ENST00000682540.1
ENST00000682575.1
ENST00000682674.1
ENST00000682695.1
ENST00000683146.1
ENST00000683356.1
ENST00000683592.1
ENST00000683922.1
ENST00000684186.1
ENST00000684276.1
ENST00000684374.1
ENST00000684382.1
ENST00000684410.1
CDS CAA 90 bp GCCAGGGTGCAGGCCTTAAGAAAGGCCTCCTTTTGTTCCAAATGTTaGCTGATGAGGGGAATGACATGGTCGATCTCTGCTGCTGGCCCC +
Preference number: 6 (lower is better)
Translates to: ARVQALRKASFCSKC*LMRGMTWSISAAGP
Trigger: GGGGCCAGCAGCAGAGATCGACCATGTCATTCCCCTCATCAGCAAACATTTGGAACAAAAGGAGGCCTTTCTTAAGGCCTGCACCCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 20 transcripts:
ENST00000240874.7
ENST00000354186.8
ENST00000360013.7
ENST00000393501.5
ENST00000460856.5
ENST00000484224.6
ENST00000682277.1
ENST00000682506.1
ENST00000682540.1
ENST00000682575.1
ENST00000682674.1
ENST00000682695.1
ENST00000683146.1
ENST00000683356.1
ENST00000683592.1
ENST00000683922.1
ENST00000684186.1
ENST00000684374.1
ENST00000684382.1
ENST00000684410.1
CDS CAA 90 bp AAGATCAAGGTCGAGCAGGGTTGGCTTCCTCTGATGCTCCTCCCTTaGGCCTGCAGATACAGATGGCTGCCTTCTTGTTGCCTCCTCACA +
Preference number: 6 (lower is better)
Translates to: KIKVEQGWLPLMLLP*ACRYRWLPSCCLLT
Trigger: TGTGAGGAGGCAACAAGAAGGCAGCCATCTGTATCTGCAGGCCAAAGGGAGGAGCATCAGAGGAAGCCAACCCTGCTCGACCTTGATCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683280.1
CDS TCA 72 bp GTTGGCCACGGACTCGGACTTGCCTCCATTCTCGCTTaGGGAATGAGAGTATGCATCTCTACACGGGAAGCA +
Preference number: 6 (lower is better)
Translates to: VGHGLGLASILA*GMRVCISTREA
Trigger: TGCTTCCCGTGTAGAGATGCATACTCTCATTCCTCAAGCGAGAATGGAGGCAAGTCCGAGTCCGTGGCCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000454902.1
ENST00000682363.1
CDS TCA 72 bp TATCTGGGCCAGCGCTCCCCACCATGTGTAGACAGTTaGGAGCTGGCTGTACTTTCTGCTTCCCGCTATTCT +
Preference number: 6 (lower is better)
Translates to: YLGQRSPPCVDS*ELAVLSASRYS
Trigger: AGAATAGCGGGAAGCAGAAAGTACAGCCAGCTCTCAACTGTCTACACATGGTGGGGAGCGCTGGCCCAGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684410.1
CDS GCA 72 bp ACATTGAGTGTGGCATCTAGAGTGGCGGTCTGCTGCTaGTGGAACTGCTTGATCAGTTCCTGGACTGCATCC +
Preference number: 6 (lower is better)
Translates to: TLSVASRVAVCC*WNCLISSWTAS
Trigger: GGATGCAGTCCAGGAACTGATCAAGCAGTTCCAGCAGCAGCAGACCGCCACTCTAGATGCCACACTCAATGT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 26 transcripts:
ENST00000240874.7
ENST00000354186.8
ENST00000360013.7
ENST00000393501.5
ENST00000439170.2
ENST00000460856.5
ENST00000484224.6
ENST00000522553.6
ENST00000682277.1
ENST00000682506.1
ENST00000682540.1
ENST00000682575.1
ENST00000682636.1
ENST00000682674.1
ENST00000682695.1
ENST00000683124.1
ENST00000683146.1
ENST00000683356.1
ENST00000683512.1
ENST00000683592.1
ENST00000683827.1
ENST00000684186.1
ENST00000684276.1
ENST00000684374.1
ENST00000684382.1
ENST00000684410.1
CDS GCA 72 bp AGGCTTTCAGCACTGTTTTATTGTCTGAGGATGGGGTaGGCCCAGACCACAAGGCGAATTTGCAGGGATCGC +
Preference number: 6 (lower is better)
Translates to: RLSALFYCLRMG*AQTTRRICRDR
Trigger: GCGATCCCTGCAAATTCGCCTTGTGGTCTGGGCGCACCCCATCCTCAGACAATAAAACAGTGCTGAAAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 17 transcripts:
ENST00000240874.7
ENST00000354186.8
ENST00000360013.7
ENST00000460856.5
ENST00000682277.1
ENST00000682506.1
ENST00000682540.1
ENST00000682575.1
ENST00000682695.1
ENST00000683146.1
ENST00000683356.1
ENST00000683592.1
ENST00000684276.1
ENST00000684360.1
ENST00000684374.1
ENST00000684382.1
ENST00000684410.1
CDS GCA 72 bp ACCATGTGTAGACAGTTGAGAGCTGGCTGTACTTTCTaGTTCCCGCTATTCTGGCCCATGGTGGGCCCTTCT +
Preference number: 6 (lower is better)
Translates to: TMCRQLRAGCTF*FPLFWPMVGPS
Trigger: AGAAGGGCCCACCATGGGCCAGAATAGCGGGAAGCAGAAAGTACAGCCAGCTCTCAACTGTCTACACATGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684410.1
CDS CCA 72 bp GTCCCGCAGCTTGACCTCCCGATCCGAAAGGCTTGCTaGGATAATATCCAGCTCCAGGTCCTTATTATCCTC +
Preference number: 6 (lower is better)
Translates to: VPQLDLPIRKAC*DNIQLQVLIIL
Trigger: GAGGATAATAAGGACCTGGAGCTGGATATTATCCCAGCAAGCCTTTCGGATCGGGAGGTCAAGCTGCGGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 20 transcripts:
ENST00000240874.7
ENST00000354186.8
ENST00000360013.7
ENST00000393501.5
ENST00000460856.5
ENST00000484224.6
ENST00000494648.1
ENST00000682277.1
ENST00000682506.1
ENST00000682540.1
ENST00000682575.1
ENST00000682695.1
ENST00000683146.1
ENST00000683356.1
ENST00000683592.1
ENST00000683922.1
ENST00000684276.1
ENST00000684374.1
ENST00000684382.1
ENST00000684410.1
CDS CCA 72 bp TCGTTCTGCTTGCTGGCTTCGAACTTGTCCCCAGGCTaGTGGTATTCAAACCCTGGACTGCCATTGGAGGTA +
Preference number: 6 (lower is better)
Translates to: SFCLLASNLSPG*WYSNPGLPLEV
Trigger: TACCTCCAATGGCAGTCCAGGGTTTGAATACCACCAGCCTGGGGACAAGTTCGAAGCCAGCAAGCAGAACGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS CCA 72 bp AGGTCGTTCTTGCTGGCTTCGAACTTGTCCCCAGGCTaGTGGTATTCAAACCCTGGACTGCCATTGGAGGTA +
Preference number: 6 (lower is better)
Translates to: RSFLLASNLSPG*WYSNPGLPLEV
Trigger: TACCTCCAATGGCAGTCCAGGGTTTGAATACCACCAGCCTGGGGACAAGTTCGAAGCCAGCAAGAACGACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000393496.5
ENST00000459915.2
ENST00000682290.1
ENST00000682363.1
ENST00000682506.1
ENST00000683592.1
ENST00000684360.1
CDS CCA 72 bp CTGGATCACTCCAGCCCGGATGCCCCATGTTGCATATaGTGTCAGCACTCAAACACTGGTTCTGTGGTACTG +
Preference number: 6 (lower is better)
Translates to: LDHSSPDAPCCI*CQHSNTGSVVL
Trigger: CAGTACCACAGAACCAGTGTTTGAGTGCTGACACCATATGCAACATGGGGCATCCGGGCTGGAGTGATCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393496.5
ENST00000459915.2
ENST00000682363.1
ENST00000683592.1
ENST00000684360.1
CDS CCA 72 bp GAATTGCCACAGACAACCAAAAAGTTCCCTCCCTCCTaGGAAAAGCAGCGGGCCTCTGACCTTCACAGGTCT +
Preference number: 6 (lower is better)
Translates to: ELPQTTKKFPPS*EKQRASDLHRS
Trigger: AGACCTGTGAAGGTCAGAGGCCCGCTGCTTTTCCCAGGAGGGAGGGAACTTTTTGGTTGTCTGTGGCAATTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393496.5
ENST00000682363.1
ENST00000683592.1
ENST00000684360.1
CDS CCA 72 bp AACAGTGAGGGTGATGGCCTGTCCTGGACTGTCTCATaGGCAGCAACATGTCCACATAACCTCCAGTGGCTT +
Preference number: 6 (lower is better)
Translates to: NSEGDGLSWTVS*AATCPHNLQWL
Trigger: AAGCCACTGGAGGTTATGTGGACATGTTGCTGCCCATGAGACAGTCCAGGACAGGCCATCACCCTCACTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393501.5
CDS CCA 72 bp GTGCTAAGCCAGGGAGATTCCATGGGCTGGGAATGGTaGACTCACTCCAGTGTGACTTCAGGAGCAGTTGAT +
Preference number: 6 (lower is better)
Translates to: VLSQGDSMGWEW*THSSVTSGAVD
Trigger: ATCAACTGCTCCTGAAGTCACACTGGAGTGAGTCCACCATTCCCAGCCCATGGAATCTCCCTGGCTTAGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683922.1
CDS CCA 72 bp CCTCTCATAGTGCTAAGCCAGGGAGATTCCATGGGCTaGGAATGGTGGACTCACTCCAGTGTGACTTCAGGA +
Preference number: 6 (lower is better)
Translates to: PLIVLSQGDSMG*EWWTHSSVTSG
Trigger: TCCTGAAGTCACACTGGAGTGAGTCCACCATTCCCAGCCCATGGAATCTCCCTGGCTTAGCACTATGAGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683922.1
CDS CAA 72 bp GCATTGACCAGGCTGGCGTTGAGCATTGACTCTCCATaGCGGATCCATCCCAGAACCTGTTTGACTTCAGCC +
Preference number: 6 (lower is better)
Translates to: ALTRLALSIDSP*RIHPRTCLTSA
Trigger: GGCTGAAGTCAAACAGGTTCTGGGATGGATCCGCAATGGAGAGTCAATGCTCAACGCCAGCCTGGTCAATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 21 transcripts:
ENST00000240874.7
ENST00000354186.8
ENST00000360013.7
ENST00000393501.5
ENST00000460856.5
ENST00000484224.6
ENST00000682277.1
ENST00000682506.1
ENST00000682540.1
ENST00000682575.1
ENST00000682674.1
ENST00000682695.1
ENST00000683146.1
ENST00000683356.1
ENST00000683592.1
ENST00000683922.1
ENST00000684186.1
ENST00000684276.1
ENST00000684374.1
ENST00000684382.1
ENST00000684410.1
CDS CAA 72 bp CTGCTGGTTGACGGCGAGGACCTGGACCACCTCACCTaGGCTCACACAGATTTCATTCTCCTTCAGTGCATA +
Preference number: 6 (lower is better)
Translates to: LLVDGEDLDHLT*AHTDFILLQCI
Trigger: TATGCACTGAAGGAGAATGAAATCTGTGTGAGCCAAGGTGAGGTGGTCCAGGTCCTCGCCGTCAACCAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
ENST00000393496.5
ENST00000459915.2
ENST00000682290.1
ENST00000682363.1
ENST00000682506.1
ENST00000683592.1
ENST00000684360.1
CDS CAA 72 bp CACCTGCTCTGTGCAGCTGTCTGCTTCCACCTGGTATaGATCTCCCGGCACACCAAGACTATTCCTCACAGA +
Preference number: 6 (lower is better)
Translates to: HLLCAAVCFHLV*ISRHTKTIPHR
Trigger: TCTGTGAGGAATAGTCTTGGTGTGCCGGGAGATCAATACCAGGTGGAAGCAGACAGCTGCACAGAGCAGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477496.5
CDS CAA 72 bp TTATCTGGGCCAGCGCTCCCCACCATGTGTAGACAGTaGAGAGCTGGCTGTACTTTCTGCTTCCCGCTATTC +
Preference number: 6 (lower is better)
Translates to: LSGPALPTMCRQ*RAGCTFCFPLF
Trigger: GAATAGCGGGAAGCAGAAAGTACAGCCAGCTCTCAACTGTCTACACATGGTGGGGAGCGCTGGCCCAGATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684410.1
CDS CAA 90 bp TTAATCCTCATACTCCTCTCCCGGGGAAGCCAACGAGGCACTTACTaGATGCTCCCGTCACTACTTTCTGCTGCTGTGGCTTTGGTGAGG +
Preference number: 6 (lower is better)
Translates to: LILILLSRGSQRGTY*MLPSLLSAAVALVR
Trigger: CCTCACCAAAGCCACAGCAGCAGAAAGTAGTGACGGGAGCATCAAGTAAGTGCCTCGTTGGCTTCCCCGGGAGAGGAGTATGAGGATTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393496.5
ENST00000459915.2
ENST00000682363.1
ENST00000683592.1
ENST00000684360.1
CDS CAA 90 bp TGTTTTGGATTATCTGGGCCAGCGCTCCCCACCATGTGTAGACAGTaGAGAGCTGGCTGTACTTTCTGCTTCCCGCTATTCTGGCCCATG +
Preference number: 6 (lower is better)
Translates to: CFGLSGPALPTMCRQ*RAGCTFCFPLFWPM
Trigger: CATGGGCCAGAATAGCGGGAAGCAGAAAGTACAGCCAGCTCTCAACTGTCTACACATGGTGGGGAGCGCTGGCCCAGATAATCCAAAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000684410.1
CDS TCA 72 bp TCCACCGTGGTCACCCATTTCCTTATCTCCGTGGCATaGATGTGGCCTTTTTCCACAAAGCTATCGGCCAGC +
Preference number: 6 (lower is better)
Translates to: STVVTHFLISVA*MWPFSTKLSAS
Trigger: GCTGGCCGATAGCTTTGTGGAAAAAGGCCACATTCATGCCACGGAGATAAGGAAATGGGTGACCACGGTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 20 transcripts:
ENST00000240874.7
ENST00000354186.8
ENST00000360013.7
ENST00000393501.5
ENST00000460856.5
ENST00000484224.6
ENST00000494648.1
ENST00000682277.1
ENST00000682506.1
ENST00000682540.1
ENST00000682575.1
ENST00000682695.1
ENST00000683146.1
ENST00000683356.1
ENST00000683592.1
ENST00000683922.1
ENST00000684276.1
ENST00000684374.1
ENST00000684382.1
ENST00000684410.1
CDS TCA 72 bp GTTGGCCACGGACTCGGACTTGCCTCCATTCTCGCTTaGGGAATGAGAGTATGCATCTTTCACCAAGGGGAA +
Preference number: 6 (lower is better)
Translates to: VGHGLGLASILA*GMRVCIFHQGE
Trigger: TTCCCCTTGGTGAAAGATGCATACTCTCATTCCTCAAGCGAGAATGGAGGCAAGTCCGAGTCCGTGGCCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000354186.8
ENST00000360013.7
ENST00000393496.5
ENST00000471431.1
ENST00000682290.1
ENST00000682506.1
ENST00000683592.1
ENST00000684360.1
CDS TCA 72 bp TCCGCATTGGTGTACGTATTCTGCCAGCAACAACAGTaGGGCAAAGTCAAGTTGCAGTCGCGCCTTCCAGCA +
Preference number: 6 (lower is better)
Translates to: SALVYVFCQQQQ*GKVKLQSRLPA
Trigger: TGCTGGAAGGCGCGACTGCAACTTGACTTTGCCTCACTGTTGTTGCTGGCAGAATACGTACACCAATGCGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000484224.6
ENST00000682540.1
ENST00000682674.1
ENST00000682695.1
ENST00000683512.1
ENST00000683827.1
ENST00000684374.1
ENST00000684382.1
ENST00000684410.1
CDS GCA 72 bp TTCAAGGTCCAGAAATGCAGCACGCGATTCTCCCTCTaGAGGAGCTCACTCAGGATGGCTTTCACTTGTTGC +
Preference number: 6 (lower is better)
Translates to: FKVQKCSTRFSL*RSSLRMAFTCC
Trigger: GCAACAAGTGAAAGCCATCCTGAGTGAGCTCCTGCAGAGGGAGAATCGCGTGCTGCATTTCTGGACCTTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 21 transcripts:
ENST00000240874.7
ENST00000354186.8
ENST00000360013.7
ENST00000393501.5
ENST00000460856.5
ENST00000484224.6
ENST00000682277.1
ENST00000682506.1
ENST00000682540.1
ENST00000682575.1
ENST00000682674.1
ENST00000682695.1
ENST00000683146.1
ENST00000683356.1
ENST00000683592.1
ENST00000683922.1
ENST00000684186.1
ENST00000684276.1
ENST00000684374.1
ENST00000684382.1
ENST00000684410.1
CDS GCA 72 bp CTTCTCTCTTCCAGCCTTGCACCTTGTCTAACTTCATaGCACTTCCCTCCCATGATACAAGCTCCCCCGTGT +
Preference number: 6 (lower is better)
Translates to: LLSSSLAPCLTS*HFPPMIQAPPC
Trigger: ACACGGGGGAGCTTGTATCATGGGAGGGAAGTGGCATGAAGTTAGACAAGGTGCAAGGCTGGAAGAGAGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393501.5
CDS GCA 72 bp AAGGGAAAGCAGTTCTGTCAGGACAGCTGGGGTGGCTaGACACTCTTTTCTCACACTAGTCCTCAGGAAAGG +
Preference number: 6 (lower is better)
Translates to: KGKQFCQDSWGG*TLFSHTSPQER
Trigger: CCTTTCCTGAGGACTAGTGTGAGAAAAGAGTGTGCAGCCACCCCAGCTGTCCTGACAGAACTGCTTTCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683922.1
CDS CCA 72 bp TTAGCGCTGCGCTCGAACACCACATATTGCTGGCATTaGTCTAACCGCCGCTTCTTCAAGGTCCAGAAATGC +
Preference number: 6 (lower is better)
Translates to: LALRSNTTYCWH*SNRRFFKVQKC
Trigger: GCATTTCTGGACCTTGAAGAAGCGGCGGTTAGACCAATGCCAGCAATATGTGGTGTTCGAGCGCAGCGCTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 21 transcripts:
ENST00000240874.7
ENST00000354186.8
ENST00000360013.7
ENST00000393501.5
ENST00000460856.5
ENST00000484224.6
ENST00000682277.1
ENST00000682506.1
ENST00000682540.1
ENST00000682575.1
ENST00000682674.1
ENST00000682695.1
ENST00000683146.1
ENST00000683356.1
ENST00000683592.1
ENST00000683922.1
ENST00000684186.1
ENST00000684276.1
ENST00000684374.1
ENST00000684382.1
ENST00000684410.1
CDS CCA 72 bp TTCGAACTTGTCCCCAGGCTGGTGGTATTCAAACCCTaGACTGCCATTGGAGGTAGATATCTTCAGGGGAGG +
Preference number: 6 (lower is better)
Translates to: FELVPRLVVFKP*TAIGGRYLQGR
Trigger: CCTCCCCTGAAGATATCTACCTCCAATGGCAGTCCAGGGTTTGAATACCACCAGCCTGGGGACAAGTTCGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
ENST00000393496.5
ENST00000459915.2
ENST00000682290.1
ENST00000682363.1
ENST00000682506.1
ENST00000683592.1
ENST00000684360.1
CDS CCA 72 bp TTCTGCTTGCTGGCTTCGAACTTGTCCCCAGGCTGGTaGTATTCAAACCCTGGACTGCCATTGGAGGTAGAT +
Preference number: 6 (lower is better)
Translates to: FCLLASNLSPGW*YSNPGLPLEVD
Trigger: ATCTACCTCCAATGGCAGTCCAGGGTTTGAATACCACCAGCCTGGGGACAAGTTCGAAGCCAGCAAGCAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
CDS CCA 72 bp TGTTGCCCAGAATATCCTTGGGTTTACGAGGCCCTGTaGCTTCATTTTTACCCGTGTTCTCCACTTCCGCCC +
Preference number: 6 (lower is better)
Translates to: CCPEYPWVYEAL*LHFYPCSPLPP
Trigger: GGGCGGAAGTGGAGAACACGGGTAAAAATGAAGCCACAGGGCCTCGTAAACCCAAGGATATTCTGGGCAACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
ENST00000462213.2
ENST00000484542.1
ENST00000682290.1
ENST00000682506.1
CDS CCA 72 bp ACTGCACGTCTATGTGAAACCATAGGGGCTGGGAGATaGCTACGTCCCTTGGTTCACCCGGTTGACAATGTA +
Preference number: 6 (lower is better)
Translates to: TARLCETIGAGR*LRPLVHPVDNV
Trigger: TACATTGTCAACCGGGTGAACCAAGGGACGTAGCCATCTCCCAGCCCCTATGGTTTCACATAGACGTGCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
ENST00000682506.1
ENST00000684480.1
CDS CCA 72 bp TCGTTCTTGCTGGCTTCGAACTTGTCCCCAGGCTGGTaGTATTCAAACCCTGGACTGCCATTGGAGGTAGAT +
Preference number: 6 (lower is better)
Translates to: SFLLASNLSPGW*YSNPGLPLEVD
Trigger: ATCTACCTCCAATGGCAGTCCAGGGTTTGAATACCACCAGCCTGGGGACAAGTTCGAAGCCAGCAAGAACGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000393496.5
ENST00000459915.2
ENST00000682290.1
ENST00000682363.1
ENST00000682506.1
ENST00000683592.1
ENST00000684360.1
CDS CAA 72 bp AGATCCTGTCCCTGCTGGATAACCTCAAAGGTCATGTaGTTCATGGCTAGCTTCCGTTCTGTGTGGCGCTGC +
Preference number: 6 (lower is better)
Translates to: RSCPCWITSKVM*FMASFRSVWRC
Trigger: GCAGCGCCACACAGAACGGAAGCTAGCCATGAACAACATGACCTTTGAGGTTATCCAGCAGGGACAGGATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 21 transcripts:
ENST00000240874.7
ENST00000354186.8
ENST00000360013.7
ENST00000393501.5
ENST00000460856.5
ENST00000484224.6
ENST00000682277.1
ENST00000682506.1
ENST00000682540.1
ENST00000682575.1
ENST00000682674.1
ENST00000682695.1
ENST00000683146.1
ENST00000683356.1
ENST00000683592.1
ENST00000683922.1
ENST00000684186.1
ENST00000684276.1
ENST00000684374.1
ENST00000684382.1
ENST00000684410.1
CDS CAA 72 bp GACCAGATGACGTGGCTGCTTGAGACACCCTTGGTCTaGGGTGACATTCCAGTTTTCATCTCCAGAGGTGAC +
Preference number: 6 (lower is better)
Translates to: DQMTWLLETPLV*GDIPVFISRGD
Trigger: GTCACCTCTGGAGATGAAAACTGGAATGTCACCCAAGACCAAGGGTGTCTCAAGCAGCCACGTCATCTGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000682674.1
ENST00000684186.1
CDS CAA 90 bp CCCAGGTCAAAGCTCTTCCGACCATCGCGAACTTTCTTCTGCTTTTaGATGTTTCCATCTGCCTTCCCGCTGTTAAGCCGACGCACAGGA +
Preference number: 6 (lower is better)
Translates to: PRSKLFRPSRTFFCF*MFPSAFPLLSRRTG
Trigger: TCCTGTGCGTCGGCTTAACAGCGGGAAGGCAGATGGAAACATCAAAAAGCAGAAGAAAGTTCGCGATGGTCGGAAGAGCTTTGACCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
ENST00000393496.5
ENST00000454902.1
ENST00000682290.1
ENST00000682363.1
ENST00000682506.1
ENST00000683592.1
ENST00000684360.1
CDS CAA 90 bp GCACGTCTATGTGAAACCATAGGGGCTGGGAGATGGCTACGTCCCTaGGTTCACCCGGTTGACAATGTAGCTCTTGACATTGGGAATAGG +
Preference number: 6 (lower is better)
Translates to: ARLCETIGAGRWLRP*VHPVDNVALDIGNR
Trigger: CCTATTCCCAATGTCAAGAGCTACATTGTCAACCGGGTGAACCAAGGGACGTAGCCATCTCCCAGCCCCTATGGTTTCACATAGACGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
ENST00000682506.1
ENST00000684480.1
CDS CAA 90 bp GCCCTGTTTCACCTGCTCTGTGCAGCTGTCTGCTTCCACCTGGTATaGATCTCCCGGCACACCAAGACTATTCCTCACAGAGATGAATAC +
Preference number: 6 (lower is better)
Translates to: ALFHLLCAAVCFHLV*ISRHTKTIPHRDEY
Trigger: GTATTCATCTCTGTGAGGAATAGTCTTGGTGTGCCGGGAGATCAATACCAGGTGGAAGCAGACAGCTGCACAGAGCAGGTGAAACAGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477496.5
CDS CAA 90 bp GTGGGGACGCAGCTCCGGAATACCTTACTCACTTTAACAGAGACTTaGTTGCCCAGAATATCCTTGGGTTTACGAGGCCCTGTGGCTTCA +
Preference number: 6 (lower is better)
Translates to: VGTQLRNTLLTLTET*LPRISLGLRGPVAS
Trigger: TGAAGCCACAGGGCCTCGTAAACCCAAGGATATTCTGGGCAACAAAGTCTCTGTTAAAGTGAGTAAGGTATTCCGGAGCTGCGTCCCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484542.1
CDS TCA 72 bp TTCGATGACGAGGTAAGTGTCCAAGGTCGAAGCCACTaGCTGCTGCCAGATCTGAGAACCTTCCTCTCTGTA +
Preference number: 6 (lower is better)
Translates to: FDDEVSVQGRSH*LLPDLRTFLSV
Trigger: TACAGAGAGGAAGGTTCTCAGATCTGGCAGCAGTCAGTGGCTTCGACCTTGGACACTTACCTCGTCATCGAA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
ENST00000682290.1
ENST00000682506.1
CDS TCA 72 bp CATCCACCAGAGAGCTTGTCACTGTCCACTGTGTTCTaGGAGGTCCTAGAAGCAATGGAGATGGTGTCTGGT +
Preference number: 6 (lower is better)
Translates to: HPPESLSLSTVF*EVLEAMEMVSG
Trigger: ACCAGACACCATCTCCATTGCTTCTAGGACCTCTCAGAACACAGTGGACAGTGACAAGCTCTCTGGTGGATG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354186.8
ENST00000360013.7
ENST00000682506.1
ENST00000683592.1
ENST00000684360.1
CDS TCA 72 bp GATCTCCCGGCACACCAAGACTATTCCTCACAGAGATaGATACACCTTGGGCTGTATAGCAAGGCTTCCCCA +
Preference number: 6 (lower is better)
Translates to: DLPAHQDYSSQR*IHLGLYSKASP
Trigger: TGGGGAAGCCTTGCTATACAGCCCAAGGTGTATTCATCTCTGTGAGGAATAGTCTTGGTGTGCCGGGAGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477496.5
CDS TCA 72 bp CCTGTAGACCAGTCCTTGTCACTGTCCACTGTGTTCTaGGAGGTCCTAGAAGCAATGGAGATGGTGTCTGGT +
Preference number: 6 (lower is better)
Translates to: PVDQSLSLSTVF*EVLEAMEMVSG
Trigger: ACCAGACACCATCTCCATTGCTTCTAGGACCTCTCAGAACACAGTGGACAGTGACAAGGACTGGTCTACAGG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684374.1
CDS TCA 72 bp CCAGATGGGTCTGGGGCACCAGATCTCTCAATCTCCTaGGTCTTTTTCTTGGTTAATACTCCCTGCCTGTGG +
Preference number: 6 (lower is better)
Translates to: PDGSGAPDLSIS*VFFLVNTPCLW
Trigger: CCACAGGCAGGGAGTATTAACCAAGAAAAAGACTCAGGAGATTGAGAGATCTGGTGCCCCAGACCCATCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000683280.1
CDS GCA 72 bp GCCTGCCTGGCCTGGATCAAGTTTTTCAGCTCCATGTaGCTCAGCTTCCTCCTAGTAAGAAAAAGTTGGAGC +
Preference number: 6 (lower is better)
Translates to: ACLAWIKFFSSM*LSFLLVRKSWS
Trigger: GCTCCAACTTTTTCTTACTAGGAGGAAGCTGAGGCACATGGAGCTGAAAAACTTGATCCAGGCCAGGCAGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000477496.5
CDS GCA 72 bp GTAGGGAGAGAATATGATAGGAGAGGTTGTAGGCATTaGTGTCTTGCAGGGCTAGAACACAGGGGAAGAGGC +
Preference number: 6 (lower is better)
Translates to: VGREYDRRGCRH*CLAGLEHRGRG
Trigger: GCCTCTTCCCCTGTGTTCTAGCCCTGCAAGACAGCAATGCCTACAACCTCTCCTATCATATTCTCTCCCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683280.1
CDS CCA 72 bp GCTTGTCCACCGTGGTCACCCATTTCCTTATCTCCGTaGCATGAATGTGGCCTTTTTCCACAAAGCTATCGG +
Preference number: 6 (lower is better)
Translates to: ACPPWSPISLSP*HECGLFPQSYR
Trigger: CCGATAGCTTTGTGGAAAAAGGCCACATTCATGCCACGGAGATAAGGAAATGGGTGACCACGGTGGACAAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 20 transcripts:
ENST00000240874.7
ENST00000354186.8
ENST00000360013.7
ENST00000393501.5
ENST00000460856.5
ENST00000484224.6
ENST00000494648.1
ENST00000682277.1
ENST00000682506.1
ENST00000682540.1
ENST00000682575.1
ENST00000682695.1
ENST00000683146.1
ENST00000683356.1
ENST00000683592.1
ENST00000683922.1
ENST00000684276.1
ENST00000684374.1
ENST00000684382.1
ENST00000684410.1
CDS CCA 72 bp TATGTGGCTGAGCTGTTATCAGTGTCAAGGATGTTCTaGTCTGGACCCTTCCAAGTGATGGTGGGCTTTGGC +
Preference number: 6 (lower is better)
Translates to: YVAELLSVSRMF*SGPFQVMVGFG
Trigger: GCCAAAGCCCACCATCACTTGGAAGGGTCCAGACCAGAACATCCTTGACACTGATAACAGCTCAGCCACATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
ENST00000682290.1
ENST00000682506.1
CDS CCA 72 bp AAGTCCAGTCCAGTGAGTCCTGTGGTGGGTCAAATGTaGCAACAGAAGGCACACCTTTTGTCACCTAGGGTT +
Preference number: 6 (lower is better)
Translates to: KSSPVSPVVGQM*QQKAHLLSPRV
Trigger: AACCCTAGGTGACAAAAGGTGTGCCTTCTGTTGCCACATTTGACCCACCACAGGACTCACTGGACTGGACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393496.5
ENST00000682363.1
ENST00000683592.1
ENST00000684360.1
CDS CCA 72 bp TCTGGTCTTCCACTCTCAGATGATGACCAGATGACGTaGCTGCTTGAGACACCCTTGGTCTTGGGTGACATT +
Preference number: 6 (lower is better)
Translates to: SGLPLSDDDQMT*LLETPLVLGDI
Trigger: AATGTCACCCAAGACCAAGGGTGTCTCAAGCAGCCACGTCATCTGGTCATCATCTGAGAGTGGAAGACCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000682674.1
ENST00000684186.1
CDS CCA 72 bp GGGAGATCACTTCTGTGGCTAGGCTATGTGCGACTGTaGCTTCCATCTTGCCAGAGGATTCTCTTTCTTGCT +
Preference number: 6 (lower is better)
Translates to: GRSLLWLGYVRL*LPSCQRILFLA
Trigger: AGCAAGAAAGAGAATCCTCTGGCAAGATGGAAGCCACAGTCGCACATAGCCTAGCCACAGAAGTGATCTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683280.1
CDS CAA 72 bp AAATCCACCCTGCATACGTTGATACATGTCTCCTCTTaGCTCTCATCCAAGAAGGGGGAGACCCCACTCAGC +
Preference number: 6 (lower is better)
Translates to: KSTLHTLIHVSS*LSSKKGETPLS
Trigger: GCTGAGTGGGGTCTCCCCCTTCTTGGATGAGAGCAAAGAGGAGACATGTATCAACGTATGCAGGGTGGATTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
ENST00000682506.1
ENST00000684480.1
CDS CAA 72 bp TGTGAAACCATAGGGGCTGGGAGATGGCTACGTCCCTaGGTTCACCCGGTTGACAATGTAGCTCTTGACATT +
Preference number: 6 (lower is better)
Translates to: CETIGAGRWLRP*VHPVDNVALDI
Trigger: AATGTCAAGAGCTACATTGTCAACCGGGTGAACCAAGGGACGTAGCCATCTCCCAGCCCCTATGGTTTCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
ENST00000682506.1
ENST00000684480.1
CDS CAA 90 bp CCTGGCAGGTTGAGACCTCATCACAGCTGTGCTCCTTTCTTTCCGTaGATACTCAATGGGCGATTGCAGTGCATTCAAAAAGTCTCGCTG +
Preference number: 6 (lower is better)
Translates to: PGRLRPHHSCAPFFP*ILNGRLQCIQKVSL
Trigger: CAGCGAGACTTTTTGAATGCACTGCAATCGCCCATTGAGTATCAACGGAAAGAAAGGAGCACAGCTGTGATGAGGTCTCAACCTGCCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
ENST00000393496.5
ENST00000459915.2
ENST00000682290.1
ENST00000682363.1
ENST00000682506.1
ENST00000683592.1
ENST00000684360.1
CDS CAA 90 bp GGGAAGCTGAAATCCACCCTGCATACGTTGATACATGTCTCCTCTTaGCTCTCATCCAAGAAGGGGGAGACCCCACTCAGCATGACATAT +
Preference number: 6 (lower is better)
Translates to: GKLKSTLHTLIHVSS*LSSKKGETPLSMTY
Trigger: ATATGTCATGCTGAGTGGGGTCTCCCCCTTCTTGGATGAGAGCAAAGAGGAGACATGTATCAACGTATGCAGGGTGGATTTCAGCTTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
ENST00000682506.1
ENST00000684480.1
CDS CAA 90 bp CCACAGAAGTATTCATGGGGGAAGCTGAAATCCACCCTGCATACGTaGATACATGTCTCCTCTTTGCTCTCATCCAAGAAGGGGGAGACC +
Preference number: 6 (lower is better)
Translates to: PQKYSWGKLKSTLHT*IHVSSLLSSKKGET
Trigger: GGTCTCCCCCTTCTTGGATGAGAGCAAAGAGGAGACATGTATCAACGTATGCAGGGTGGATTTCAGCTTCCCCCATGAATACTTCTGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
ENST00000682506.1
ENST00000684480.1
CDS CAA 90 bp GTGAGTCCTGTGGTGGGTCAAATGTGGCAACAGAAGGCACACCTTTaGTCACCTAGGGTTTCAGTAGGGTTCTTAATGAATGTGGGGGAG +
Preference number: 6 (lower is better)
Translates to: VSPVVGQMWQQKAHL*SPRVSVGFLMNVGE
Trigger: CTCCCCCACATTCATTAAGAACCCTACTGAAACCCTAGGTGACAAAAGGTGTGCCTTCTGTTGCCACATTTGACCCACCACAGGACTCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393496.5
ENST00000682363.1
ENST00000683592.1
ENST00000684360.1
CDS CAA 90 bp GAATATATGGCTTTGTCAGCCTGTAGAGGTCCTAGAGCTTCCCTATaGGGACAAGAACTAATGTGTGCTCCCAGGGAGGTGAGAGCAGCA +
Preference number: 6 (lower is better)
Translates to: EYMALSACRGPRASL*GQELMCAPREVRAA
Trigger: TGCTGCTCTCACCTCCCTGGGAGCACACATTAGTTCTTGTCCCAATAGGGAAGCTCTAGGACCTCTACAGGCTGACAAAGCCATATATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462213.2
CDS TCA 72 bp CTCGATGTAGGGACTTCCCAACTCCAGTGTGTTTGCTaGGAAAGGCCTCACCATGGTTTTCAATCCAGTCCA +
Preference number: 6 (lower is better)
Translates to: LDVGTSQLQCVC*ERPHHGFQSSP
Trigger: TGGACTGGATTGAAAACCATGGTGAGGCCTTTCTCAGCAAACACACTGGAGTTGGGAAGTCCCTACATCGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000240874.7
ENST00000354186.8
ENST00000360013.7
ENST00000439170.2
ENST00000460856.5
ENST00000682506.1
ENST00000683124.1
ENST00000683592.1
ENST00000684186.1
ENST00000684276.1
CDS TCA 72 bp ACAAGGTTGCCATCCTTGTCACTGTCCACTGTGTTCTaGGAGGTCCTAGAAGCAATGGAGATGGTGTCTGGT +
Preference number: 6 (lower is better)
Translates to: TRLPSLSLSTVF*EVLEAMEMVSG
Trigger: ACCAGACACCATCTCCATTGCTTCTAGGACCTCTCAGAACACAGTGGACAGTGACAAGGATGGCAACCTTGT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000240874.7
ENST00000460856.5
ENST00000682277.1
ENST00000682695.1
ENST00000683356.1
ENST00000684276.1
ENST00000684382.1
CDS TCA 72 bp TGCTGGAACACCTTGCACTTTGACTGTTGCAGACGTTaGTGTGGTCCCGTGGTCATTTGTTGCTATGCAGGT +
Preference number: 6 (lower is better)
Translates to: CWNTLHFDCCRR*CGPVVICCYAG
Trigger: ACCTGCATAGCAACAAATGACCACGGGACCACATCAACGTCTGCAACAGTCAAAGTGCAAGGTGTTCCAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
ENST00000682290.1
ENST00000682506.1
CDS TCA 72 bp ATTCAGTCTTGCTTTGGTTCACACTGCACGTCTATGTaGAACCATAGGGGCTGGGAGATGGCTACGTCCCTT +
Preference number: 6 (lower is better)
Translates to: IQSCFGSHCTSM*NHRGWEMATSL
Trigger: AAGGGACGTAGCCATCTCCCAGCCCCTATGGTTTCACATAGACGTGCAGTGTGAACCAAAGCAAGACTGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
ENST00000682506.1
ENST00000684480.1
CDS TCA 72 bp CACTGGAAGCAGATGTCTGTAGCCTCTTCTTGGAGATaGGGAAGGAGAAGAATTGCAGGGATGAGGCTGAAG +
Preference number: 6 (lower is better)
Translates to: HWKQMSVASSWR*GRRRIAGMRLK
Trigger: CTTCAGCCTCATCCCTGCAATTCTTCTCCTTCCTCATCTCCAAGAAGAGGCTACAGACATCTGCTTCCAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683922.1
CDS GCA 72 bp CAGGTAACAAAGCAGTGTCCCACATCCTCAGGCAGTTaGTCGTACTTCTCCAGCTCTTTGAGGAAGATGTTG +
Preference number: 6 (lower is better)
Translates to: QVTKQCPTSSGS*SYFSSSLRKML
Trigger: CAACATCTTCCTCAAAGAGCTGGAGAAGTACGAGCAACTGCCTGAGGATGTGGGACACTGCTTTGTTACCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 20 transcripts:
ENST00000240874.7
ENST00000354186.8
ENST00000360013.7
ENST00000393501.5
ENST00000460856.5
ENST00000484224.6
ENST00000682277.1
ENST00000682506.1
ENST00000682540.1
ENST00000682575.1
ENST00000682695.1
ENST00000683146.1
ENST00000683356.1
ENST00000683592.1
ENST00000683922.1
ENST00000684276.1
ENST00000684360.1
ENST00000684374.1
ENST00000684382.1
ENST00000684410.1
CDS GCA 72 bp TGCCGCTGTTGTATCTCATCAAAGAAGGTGCCCGCATaGTCCAGGATAAGCTGGTTGGAATCAGGCTTGTTT +
Preference number: 6 (lower is better)
Translates to: CRCCISSKKVPA*SRISWLESGLF
Trigger: AAACAAGCCTGATTCCAACCAGCTTATCCTGGAGCATGCGGGCACCTTCTTTGATGAGATACAACAGCGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENST00000240874.7
ENST00000354186.8
ENST00000360013.7
ENST00000393501.5
ENST00000460856.5
ENST00000682277.1
ENST00000682506.1
ENST00000682540.1
ENST00000682575.1
ENST00000682695.1
ENST00000683146.1
ENST00000683356.1
ENST00000683592.1
ENST00000683922.1
ENST00000684276.1
ENST00000684360.1
ENST00000684374.1
ENST00000684382.1
ENST00000684410.1
CDS GCA 72 bp TTCTCCACTTCCGCCCGCTTTCTCATGCGTAGAGTATaGCATGAACATGACTTCTTGATGCTCCCGTCACTA +
Preference number: 6 (lower is better)
Translates to: FSTSARFLMRRV*HEHDFLMLPSL
Trigger: TAGTGACGGGAGCATCAAGAAGTCATGTTCATGGCATACTCTACGCATGAGAAAGCGGGCGGAAGTGGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
ENST00000484542.1
ENST00000682290.1
ENST00000682506.1
CDS GCA 72 bp CCCACCCCCACTTCTATTATCCCCAACCCTAGTTTGTaGCTAGCAGAGAGCAGTACTTACTTTCAGCACTGT +
Preference number: 6 (lower is better)
Translates to: PTPTSIIPNPSL*LAESSTYFQHC
Trigger: ACAGTGCTGAAAGTAAGTACTGCTCTCTGCTAGGCACAAACTAGGGTTGGGGATAATAGAAGTGGGGGTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473056.1
CDS GCA 72 bp CTGTGGCTAGGCTATGTGCGACTGTGGCTTCCATCTTaGCAGAGGATTCTCTTTCTTGCTGGCTTTGATGAA +
Preference number: 6 (lower is better)
Translates to: LWLGYVRLWLPS*QRILFLAGFDE
Trigger: TTCATCAAAGCCAGCAAGAAAGAGAATCCTCTGGCAAGATGGAAGCCACAGTCGCACATAGCCTAGCCACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683280.1
CDS GCA 72 bp TTCCTGAGACCTCACCAGAAGCAGATGCTAGCACTGTaGTTCCTATACAGCCTGCAGAACCATGAGCCAATT +
Preference number: 6 (lower is better)
Translates to: FLRPHQKQMLAL*FLYSLQNHEPI
Trigger: AATTGGCTCATGGTTCTGCAGGCTGTATAGGAAGCACAGTGCTAGCATCTGCTTCTGGTGAGGTCTCAGGAA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683280.1
CDS CCA 72 bp GGGCACCAGATCTCTCAATCTCCTGAGTCTTTTTCTTaGTTAATACTCCCTGCCTGTGGCAAGGAGACTCTG +
Preference number: 6 (lower is better)
Translates to: GHQISQSPESFS*LILPACGKETL
Trigger: CAGAGTCTCCTTGCCACAGGCAGGGAGTATTAACCAAGAAAAAGACTCAGGAGATTGAGAGATCTGGTGCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000683280.1
CDS CAA 72 bp CCAGGTAACAAAGCAGTGTCCCACATCCTCAGGCAGTaGCTCGTACTTCTCCAGCTCTTTGAGGAAGATGTT +
Preference number: 6 (lower is better)
Translates to: PGNKAVSHILRQ*LVLLQLFEEDV
Trigger: AACATCTTCCTCAAAGAGCTGGAGAAGTACGAGCAACTGCCTGAGGATGTGGGACACTGCTTTGTTACCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 20 transcripts:
ENST00000240874.7
ENST00000354186.8
ENST00000360013.7
ENST00000393501.5
ENST00000460856.5
ENST00000484224.6
ENST00000682277.1
ENST00000682506.1
ENST00000682540.1
ENST00000682575.1
ENST00000682695.1
ENST00000683146.1
ENST00000683356.1
ENST00000683592.1
ENST00000683922.1
ENST00000684276.1
ENST00000684360.1
ENST00000684374.1
ENST00000684382.1
ENST00000684410.1
CDS CAA 72 bp TTGCCCACCCCCACTTCTATTATCCCCAACCCTAGTTaGTGCCTAGCAGAGAGCAGTACTTACTTTCAGCAC +
Preference number: 6 (lower is better)
Translates to: LPTPTSIIPNPS*CLAESSTYFQH
Trigger: GTGCTGAAAGTAAGTACTGCTCTCTGCTAGGCACAAACTAGGGTTGGGGATAATAGAAGTGGGGGTGGGCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473056.1
CDS CAA 72 bp GATGATGACCAGATGACGTGGCTGCTTGAGACACCCTaGGTCTTGGGTGACATTCCAGTTTTCATCTCCAGA +
Preference number: 6 (lower is better)
Translates to: DDDQMTWLLETP*VLGDIPVFISR
Trigger: TCTGGAGATGAAAACTGGAATGTCACCCAAGACCAAGGGTGTCTCAAGCAGCCACGTCATCTGGTCATCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000682674.1
ENST00000684186.1
CDS CAA 72 bp GAGTTCCCGAAGTCTTCACTATGCCAGGATCAAGCCTaGATGGAAGCTAAGTCCATCTTCCCCACTGTGTTC +
Preference number: 6 (lower is better)
Translates to: EFPKSSLCQDQA*MEAKSIFPTVF
Trigger: GAACACAGTGGGGAAGATGGACTTAGCTTCCATCAAGGCTTGATCCTGGCATAGTGAAGACTTCGGGAACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684441.1
CDS CAA 90 bp GTGGCTGCTGTGGGCCGCCTCCGAAAATCTTCCTGTAAGATCACATaGATGAAATCTCTGGCAGCATTGCTCACACCACAGAAGTATTCA +
Preference number: 6 (lower is better)
Translates to: VAAVGRLRKSSCKIT*MKSLAALLTPQKYS
Trigger: TGAATACTTCTGTGGTGTGAGCAATGCTGCCAGAGATTTCATCAATGTGATCTTACAGGAAGATTTTCGGAGGCGGCCCACAGCAGCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
ENST00000682506.1
ENST00000684480.1
CDS CAA 90 bp GGGACGCAGCTCCGGAATACCTTACTCACTTTAACAGAGACTTTGTaGCCCAGAATATCCTTGGGTTTACGAGGCCCTGTGGCTTCATTT +
Preference number: 6 (lower is better)
Translates to: GTQLRNTLLTLTETL*PRISLGLRGPVASF
Trigger: AAATGAAGCCACAGGGCCTCGTAAACCCAAGGATATTCTGGGCAACAAAGTCTCTGTTAAAGTGAGTAAGGTATTCCGGAGCTGCGTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484542.1
CDS TCA 72 bp GGCACTGCTCTAGCCGCTTATGAGTCTGCTCTGCATTaGGCTCCAATTCATGCTGCTTCTCATGGAGAAATT +
Preference number: 6 (lower is better)
Translates to: GTALAAYESALH*APIHAASHGEI
Trigger: AATTTCTCCATGAGAAGCAGCATGAATTGGAGCTCAATGCAGAGCAGACTCATAAGCGGCTAGAGCAGTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 21 transcripts:
ENST00000240874.7
ENST00000354186.8
ENST00000360013.7
ENST00000393501.5
ENST00000460856.5
ENST00000484224.6
ENST00000682277.1
ENST00000682506.1
ENST00000682540.1
ENST00000682575.1
ENST00000682674.1
ENST00000682695.1
ENST00000683146.1
ENST00000683356.1
ENST00000683592.1
ENST00000683922.1
ENST00000684186.1
ENST00000684276.1
ENST00000684374.1
ENST00000684382.1
ENST00000684410.1
CDS TCA 72 bp TTCAATGTTGGAGGCTTTCAGCACTGTTTTATTGTCTaGGGATGGGGTGCGCCCAGACCACAAGGCGAATTT +
Preference number: 6 (lower is better)
Translates to: FNVGGFQHCFIV*GWGAPRPQGEF
Trigger: AAATTCGCCTTGTGGTCTGGGCGCACCCCATCCTCAGACAATAAAACAGTGCTGAAAGCCTCCAACATTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 17 transcripts:
ENST00000240874.7
ENST00000354186.8
ENST00000360013.7
ENST00000460856.5
ENST00000682277.1
ENST00000682506.1
ENST00000682540.1
ENST00000682575.1
ENST00000682695.1
ENST00000683146.1
ENST00000683356.1
ENST00000683592.1
ENST00000684276.1
ENST00000684360.1
ENST00000684374.1
ENST00000684382.1
ENST00000684410.1
CDS TCA 72 bp TTCTCCAGAATCACAAGAGGAGACCGTGTATGTGGCTaGGCTGTTATCAGTGTCAAGGATGTTCTGGTCTGG +
Preference number: 6 (lower is better)
Translates to: FSRITRGDRVCG*AVISVKDVLVW
Trigger: CCAGACCAGAACATCCTTGACACTGATAACAGCTCAGCCACATACACGGTCTCCTCTTGTGATTCTGGAGAA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
ENST00000682290.1
ENST00000682506.1
CDS TCA 72 bp GACACTATGCCACATTTCTTGTTCTTCCCATGGGGCTaGGTCACTGAGCTTTTTCTGGGTTTCTGGGAGGTT +
Preference number: 6 (lower is better)
Translates to: DTMPHFLFFPWG*VTELFLGFWEV
Trigger: AACCTCCCAGAAACCCAGAAAAAGCTCAGTGACTCAGCCCCATGGGAAGAACAAGAAATGTGGCATAGTGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000682674.1
ENST00000684186.1
CDS TCA 72 bp GACGTTTTCCTCATCTTGTCACTGTCCACTGTGTTCTaGGAGGTCCTAGAAGCAATGGAGATGGTGTCTGGT +
Preference number: 6 (lower is better)
Translates to: DVFLILSLSTVF*EVLEAMEMVSG
Trigger: ACCAGACACCATCTCCATTGCTTCTAGGACCTCTCAGAACACAGTGGACAGTGACAAGATGAGGAAAACGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682575.1
CDS TCA 72 bp ATAGAGGAAACAGTGTGTGTAAGACTTTCCTTGGTCTaGCGGTTCAGAAGAAGCCCACCAGGTCCACAATCC +
Preference number: 6 (lower is better)
Translates to: IEETVCVRLSLV*RFRRSPPGPQS
Trigger: GGATTGTGGACCTGGTGGGCTTCTTCTGAACCGTCAGACCAAGGAAAGTCTTACACACACTGTTTCCTCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684374.1
CDS TCA 72 bp GAGACTCTGGGGAGGCCCCCAATGATCCTCTCTCCTTaGGTATATACTGGCTTTGTAGCTTGCTTCTTAATC +
Preference number: 6 (lower is better)
Translates to: ETLGRPPMILSP*VYTGFVACFLI
Trigger: GATTAAGAAGCAAGCTACAAAGCCAGTATATACTCAAGGAGAGAGGATCATTGGGGGCCTCCCCAGAGTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000683280.1
CDS TCA 72 bp AGTTCCCGAAGTCTTCACTATGCCAGGATCAAGCCTTaGTGGAAGCTAAGTCCATCTTCCCCACTGTGTTCA +
Preference number: 6 (lower is better)
Translates to: SSRSLHYARIKP*WKLSPSSPLCS
Trigger: TGAACACAGTGGGGAAGATGGACTTAGCTTCCATCAAGGCTTGATCCTGGCATAGTGAAGACTTCGGGAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684441.1
CDS GCA 72 bp GTTTTTGACCAACTTTTCTATTGCATTGACAAGGTCTaGAGCAGTAGGTACTTCAGTGGAAGCCTGCCGGGC +
Preference number: 6 (lower is better)
Translates to: VFDQLFYCIDKV*SSRYFSGSLPG
Trigger: GCCCGGCAGGCTTCCACTGAAGTACCTACTGCTGCAGACCTTGTCAATGCAATAGAAAAGTTGGTCAAAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
ENST00000459915.2
ENST00000682290.1
ENST00000682363.1
ENST00000682506.1
CDS GCA 72 bp GATGTGCAGCTTCCGCTCGTGCTTAATAAAGAGCTGTaGCAATCTGTCTTGCTCCTGGATACACTTTTCCAG +
Preference number: 6 (lower is better)
Translates to: DVQLPLVLNKEL*QSVLLLDTLFQ
Trigger: CTGGAAAAGTGTATCCAGGAGCAAGACAGATTGGCACAGCTCTTTATTAAGCACGAGCGGAAGCTGCACATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
ENST00000393496.5
ENST00000459915.2
ENST00000682290.1
ENST00000682363.1
ENST00000682506.1
ENST00000683592.1
ENST00000684360.1
CDS GCA 72 bp CAGACGTTGATGTGGTCCCGTGGTCATTTGTTGCTATaGAGGTATAAATCCCACTGTCTTGGGGCATCAGAT +
Preference number: 6 (lower is better)
Translates to: QTLMWSRGHLLL*RYKSHCLGASD
Trigger: ATCTGATGCCCCAAGACAGTGGGATTTATACCTGCATAGCAACAAATGACCACGGGACCACATCAACGTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
ENST00000682290.1
ENST00000682506.1
CDS GCA 72 bp TTGGATGTTTGTCCCCACCCAAATCTTATGTTGAAATaGAATCCCCAGTATTGGAGACAGGGCCTGGTGGGA +
Preference number: 6 (lower is better)
Translates to: LDVCPHPNLMLK*NPQYWRQGLVG
Trigger: TCCCACCAGGCCCTGTCTCCAATACTGGGGATTGCATTTCAACATAAGATTTGGGTGGGGACAAACATCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683280.1
CDS CCA 72 bp TGCTCTGCATTGAGCTCCAATTCATGCTGCTTCTCATaGAGAAATTCCAATAACTCTTGCACCTGGGCTGCC +
Preference number: 6 (lower is better)
Translates to: CSALSSNSCCFS*RNSNNSCTWAA
Trigger: GGCAGCCCAGGTGCAAGAGTTATTGGAATTTCTCCATGAGAAGCAGCATGAATTGGAGCTCAATGCAGAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 21 transcripts:
ENST00000240874.7
ENST00000354186.8
ENST00000360013.7
ENST00000393501.5
ENST00000460856.5
ENST00000484224.6
ENST00000682277.1
ENST00000682506.1
ENST00000682540.1
ENST00000682575.1
ENST00000682674.1
ENST00000682695.1
ENST00000683146.1
ENST00000683356.1
ENST00000683592.1
ENST00000683922.1
ENST00000684186.1
ENST00000684276.1
ENST00000684374.1
ENST00000684382.1
ENST00000684410.1
CDS CCA 72 bp TCTCTGGCAGCATTGCTCACACCACAGAAGTATTCATaGGGGAAGCTGAAATCCACCCTGCATACGTTGATA +
Preference number: 6 (lower is better)
Translates to: SLAALLTPQKYS*GKLKSTLHTLI
Trigger: TATCAACGTATGCAGGGTGGATTTCAGCTTCCCCCATGAATACTTCTGTGGTGTGAGCAATGCTGCCAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
ENST00000682506.1
ENST00000684480.1
CDS CCA 72 bp AGTTGTAACACTTTAAGCCATTTCTGCAGGGTTGGTTaGCTGGAGCACTGGAAGCAGATGTCTGTAGCCTCT +
Preference number: 6 (lower is better)
Translates to: SCNTLSHFCRVG*LEHWKQMSVAS
Trigger: AGAGGCTACAGACATCTGCTTCCAGTGCTCCAGCCAACCAACCCTGCAGAAATGGCTTAAAGTGTTACAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683922.1
CDS CCA 72 bp AAAACAAAGAAGGGAAAGCAGTTCTGTCAGGACAGCTaGGGTGGCTGCACACTCTTTTCTCACACTAGTCCT +
Preference number: 6 (lower is better)
Translates to: KTKKGKQFCQDS*GGCTLFSHTSP
Trigger: AGGACTAGTGTGAGAAAAGAGTGTGCAGCCACCCCAGCTGTCCTGACAGAACTGCTTTCCCTTCTTTGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683922.1
CDS CAA 72 bp AGCAAAGAGGAGGACATTTCATCCTGTGTAGGGTCGTaGTCAAAAATCTTCATAGGTGGTGGGAGGGGTGTG +
Preference number: 6 (lower is better)
Translates to: SKEEDISSCVGS*SKIFIGGGRGV
Trigger: CACACCCCTCCCACCACCTATGAAGATTTTTGACAACGACCCTACACAGGATGAAATGTCCTCCTCTTTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
ENST00000682290.1
ENST00000682363.1
ENST00000682506.1
CDS CAA 72 bp TCCTCGGAACTGTTCGTCTCTTTAACAGAGACTTTGTaGCCCAGAATATCCTTGGGTTTACGAGGCCCTGTG +
Preference number: 6 (lower is better)
Translates to: SSELFVSLTETL*PRISLGLRGPV
Trigger: CACAGGGCCTCGTAAACCCAAGGATATTCTGGGCAACAAAGTCTCTGTTAAAGAGACGAACAGTTCCGAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
ENST00000462213.2
ENST00000682290.1
ENST00000682506.1
CDS CAA 72 bp TGCCTGGTCACAGCTTTTGAGATCAGAGGTAAAAACTaGTCTTATGAGGGCAGCCCATCAAGATGCAGCCAG +
Preference number: 6 (lower is better)
Translates to: CLVTAFEIRGKN*SYEGSPSRCSQ
Trigger: CTGGCTGCATCTTGATGGGCTGCCCTCATAAGACAAGTTTTTACCTCTGATCTCAAAAGCTGTGACCAGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000682674.1
CDS CAA 72 bp TGCAACAAGAAACTGAGACCCTCAGCCCCAAAACCCTaGAGGAACTGCCAACAACCATGTAAGTCAAGTCAG +
Preference number: 6 (lower is better)
Translates to: CNKKLRPSAPKP*RNCQQPCKSSQ
Trigger: CTGACTTGACTTACATGGTTGTTGGCAGTTCCTCAAGGGTTTTGGGGCTGAGGGTCTCAGTTTCTTGTTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683280.1
CDS CAA 72 bp GGAGACTCTGGGGAGGCCCCCAATGATCCTCTCTCCTaGAGTATATACTGGCTTTGTAGCTTGCTTCTTAAT +
Preference number: 6 (lower is better)
Translates to: GDSGEAPNDPLS*SIYWLCSLLLN
Trigger: ATTAAGAAGCAAGCTACAAAGCCAGTATATACTCAAGGAGAGAGGATCATTGGGGGCCTCCCCAGAGTCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000683280.1
CDS CAA 90 bp TTTGTCTGCCCAGGTAACAAAGCAGTGTCCCACATCCTCAGGCAGTaGCTCGTACTTCTCCAGCTCTTTGAGGAAGATGTTGTTATGGAA +
Preference number: 6 (lower is better)
Translates to: FVCPGNKAVSHILRQ*LVLLQLFEEDVVME
Trigger: TTCCATAACAACATCTTCCTCAAAGAGCTGGAGAAGTACGAGCAACTGCCTGAGGATGTGGGACACTGCTTTGTTACCTGGGCAGACAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENST00000240874.7
ENST00000354186.8
ENST00000360013.7
ENST00000393501.5
ENST00000460856.5
ENST00000682277.1
ENST00000682506.1
ENST00000682540.1
ENST00000682575.1
ENST00000682695.1
ENST00000683146.1
ENST00000683356.1
ENST00000683592.1
ENST00000683922.1
ENST00000684276.1
ENST00000684360.1
ENST00000684374.1
ENST00000684382.1
ENST00000684410.1
CDS CAA 90 bp ATTGTGGTGGCACCACATGACCTGCCAAATGCCTGGTCACAGCTTTaGAGATCAGAGGTAAAAACTTGTCTTATGAGGGCAGCCCATCAA +
Preference number: 6 (lower is better)
Translates to: IVVAPHDLPNAWSQL*RSEVKTCLMRAAHQ
Trigger: TTGATGGGCTGCCCTCATAAGACAAGTTTTTACCTCTGATCTCAAAAGCTGTGACCAGGCATTTGGCAGGTCATGTGGTGCCACCACAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000682674.1
CDS CAA 90 bp AGTGCTCACACTATGCTCTTTCCAGCCTCCATGCCTGTGTTCGGTTaGTCTAGATTGGAACAACCTTCTTCCTTTTCTGAGAACTCCACC +
Preference number: 6 (lower is better)
Translates to: SAHTMLFPASMPVFG*SRLEQPSSFSENST
Trigger: GGTGGAGTTCTCAGAAAAGGAAGAAGGTTGTTCCAATCTAGACAAACCGAACACAGGCATGGAGGCTGGAAAGAGCATAGTGTGAGCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683280.1
CDS CAA 90 bp GAACTGTTCGTCTCTTTAACAGAGACTTTGTTGCCCAGAATATCCTaGGGTTTACGAGGCCCTGTGGCTTCATTTTTACCCGTGTTCTCC +
Preference number: 6 (lower is better)
Translates to: ELFVSLTETLLPRIS*GLRGPVASFLPVFS
Trigger: GGAGAACACGGGTAAAAATGAAGCCACAGGGCCTCGTAAACCCAAGGATATTCTGGGCAACAAAGTCTCTGTTAAAGAGACGAACAGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
ENST00000462213.2
ENST00000682290.1
ENST00000682506.1
CDS CAA 90 bp GGTCCCGTGGTCATTTGTTGCTATGCAGGTATAAATCCCACTGTCTaGGGGCATCAGATTACAGATCTTCAGGGTGATTTCTCCAGAATC +
Preference number: 6 (lower is better)
Translates to: GPVVICCYAGINPTV*GHQITDLQGDFSRI
Trigger: GATTCTGGAGAAATCACCCTGAAGATCTGTAATCTGATGCCCCAAGACAGTGGGATTTATACCTGCATAGCAACAAATGACCACGGGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
ENST00000682290.1
ENST00000682506.1
CDS CAA 90 bp ACAGATAAAGAAACCGAAGCTCACACAAGACCACAAAGCAAGATTTaGCTGAGTCAAGACTGGGACAGGACTTATCTCACGTCTAGCCCG +
Preference number: 6 (lower is better)
Translates to: TDKETEAHTRPQSKI*LSQDWDRTYLTSSP
Trigger: CGGGCTAGACGTGAGATAAGTCCTGTCCCAGTCTTGACTCAGCAAAATCTTGCTTTGTGGTCTTGTGTGAGCTTCGGTTTCTTTATCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439170.2
ENST00000682636.1
CDS CAA 90 bp TGTTTTTCCCCAGGTAACAAAGCAGTGTCCCACATCCTCAGGCAGTaGCTCGTACTTCTCCAGCTCTTTGAGGAAGATGTTGTTATGGAA +
Preference number: 6 (lower is better)
Translates to: CFSPGNKAVSHILRQ*LVLLQLFEEDVVME
Trigger: TTCCATAACAACATCTTCCTCAAAGAGCTGGAGAAGTACGAGCAACTGCCTGAGGATGTGGGACACTGCTTTGTTACCTGGGGAAAAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484224.6
CDS CAA 90 bp CTGTGGCAAGGAGACTCTGGGGAGGCCCCCAATGATCCTCTCTCCTaGAGTATATACTGGCTTTGTAGCTTGCTTCTTAATCAGTATAAT +
Preference number: 6 (lower is better)
Translates to: LWQGDSGEAPNDPLS*SIYWLCSLLLNQYN
Trigger: ATTATACTGATTAAGAAGCAAGCTACAAAGCCAGTATATACTCAAGGAGAGAGGATCATTGGGGGCCTCCCCAGAGTCTCCTTGCCACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000683280.1
CDS CAA 90 bp AACAGATGTGAAGATGCGGTTTTGGTCAGCATAGATAAGGAGCACTaGGAACCCAGGCATAAAGCACATCTTTCAGGTCTGGAGGCTGAT +
Preference number: 6 (lower is better)
Translates to: NRCEDAVLVSIDKEH*EPRHKAHLSGLEAD
Trigger: ATCAGCCTCCAGACCTGAAAGATGTGCTTTATGCCTGGGTTCCAAGTGCTCCTTATCTATGCTGACCAAAACCGCATCTTCACATCTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683280.1
CDS TCA 72 bp CTCAAAGTAGGCGTCATACTCAGCAACGATGTACTCTaGGCGCGGCTTATTCTGACAATACCACACGTAGAT +
Preference number: 6 (lower is better)
Translates to: LKVGVILSNDVL*ARLILTIPHVD
Trigger: ATCTACGTGTGGTATTGTCAGAATAAGCCGCGCTCAGAGTACATCGTTGCTGAGTATGACGCCTACTTTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
ENST00000393496.5
ENST00000459915.2
ENST00000682290.1
ENST00000682363.1
ENST00000682506.1
ENST00000683592.1
ENST00000684360.1
CDS TCA 72 bp CACTGTCTTGGGGCATCAGATTACAGATCTTCAGGGTaGTTTCTCCAGAATCACAAGAGGAGACCGTGTATG +
Preference number: 6 (lower is better)
Translates to: HCLGASDYRSSG*FLQNHKRRPCM
Trigger: CATACACGGTCTCCTCTTGTGATTCTGGAGAAATCACCCTGAAGATCTGTAATCTGATGCCCCAAGACAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
ENST00000682290.1
ENST00000682506.1
CDS TCA 72 bp CAACCCTGCAGTTGTGAAGGTACTGCAGAGCCTCCATaGTGTCTCGGATATAGAAAGCTACTTTTTCCTCCA +
Preference number: 6 (lower is better)
Translates to: QPCSCEGTAEPP*CLGYRKLLFPP
Trigger: TGGAGGAAAAAGTAGCTTTCTATATCCGAGACATCATGGAGGCTCTGCAGTACCTTCACAACTGCAGGGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
ENST00000682506.1
CDS TCA 72 bp ACAAAGGGTCTTGGGAGCAACTTCTTCACAGACCTATaGAGACAAGCTCAGAGCAGAGCCCTTACATTCCAT +
Preference number: 6 (lower is better)
Translates to: TKGLGSNFFTDL*RQAQSRALTFH
Trigger: ATGGAATGTAAGGGCTCTGCTCTGAGCTTGTCTTCATAGGTCTGTGAAGAAGTTGCTCCCAAGACCCTTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462213.2
CDS TCA 72 bp ACATTCAGCCCCTTTACTTGGCCCATGATAACAGCATaGAGGAGGATGAACAGTCACTCATCTTGTGGGTCA +
Preference number: 6 (lower is better)
Translates to: TFSPFTWPMITA*RRMNSHSSCGS
Trigger: TGACCCACAAGATGAGTGACTGTTCATCCTCCTTCATGCTGTTATCATGGGCCAAGTAAAGGGGCTGAATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484224.6
CDS TCA 72 bp GGTTTCTTATACATAGGTGATTGTGGTGGCACCACATaGCCTGCCAAATGCCTGGTCACAGCTTTTGAGATC +
Preference number: 6 (lower is better)
Translates to: GFLYIGDCGGTT*PAKCLVTAFEI
Trigger: GATCTCAAAAGCTGTGACCAGGCATTTGGCAGGTCATGTGGTGCCACCACAATCACCTATGTATAAGAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682674.1
CDS TCA 72 bp GGTCCCTTGAGGAGCAACTGGTATTTTGTTATTCTCTaGATGGGCTTGATGAGGAAGTCACTCAGTGTCAGC +
Preference number: 6 (lower is better)
Translates to: GPLRSNWYFVIL*MGLMRKSLSVS
Trigger: GCTGACACTGAGTGACTTCCTCATCAAGCCCATTCAGAGAATAACAAAATACCAGTTGCTCCTCAAGGGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682363.1
CDS TCA 72 bp TTCTCAAATCCCCAATATTCCAAGTGCCAAGTAGCCTaGGTTCCCGAAGTCTTCACTATGCCAGGATCAAGC +
Preference number: 6 (lower is better)
Translates to: FSNPQYSKCQVA*VPEVFTMPGSS
Trigger: GCTTGATCCTGGCATAGTGAAGACTTCGGGAACTCAGGCTACTTGGCACTTGGAATATTGGGGATTTGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684441.1
CDS GCA 72 bp AGGTCAAAGCTCTTCCGACCATCGCGAACTTTCTTCTaGTTTTTGATGTTTCCATCTGCCTTCCCGCTGTTA +
Preference number: 6 (lower is better)
Translates to: RSKLFRPSRTFF*FLMFPSAFPLL
Trigger: TAACAGCGGGAAGGCAGATGGAAACATCAAAAAGCAGAAGAAAGTTCGCGATGGTCGGAAGAGCTTTGACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
ENST00000393496.5
ENST00000454902.1
ENST00000682290.1
ENST00000682363.1
ENST00000682506.1
ENST00000683592.1
ENST00000684360.1
CDS GCA 72 bp TTCTCCACTTCCGCCCGCTTTCTCATGCGTAGAGTATaGCATGAACATGACTTCCTGGATATTTTAGGGCAA +
Preference number: 6 (lower is better)
Translates to: FSTSARFLMRRV*HEHDFLDILGQ
Trigger: TTGCCCTAAAATATCCAGGAAGTCATGTTCATGGCATACTCTACGCATGAGAAAGCGGGCGGAAGTGGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462213.2
CDS CCA 72 bp TCACAGCTGTGCTCCTTTCTTTCCGTTGATACTCAATaGGCGATTGCAGTGCATTCAAAAAGTCTCGCTGTG +
Preference number: 6 (lower is better)
Translates to: SQLCSFLSVDTQ*AIAVHSKSLAV
Trigger: CACAGCGAGACTTTTTGAATGCACTGCAATCGCCCATTGAGTATCAACGGAAAGAAAGGAGCACAGCTGTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
ENST00000393496.5
ENST00000459915.2
ENST00000682290.1
ENST00000682363.1
ENST00000682506.1
ENST00000683592.1
ENST00000684360.1
CDS CCA 72 bp GTGATTGTGGTGGCACCACATGACCTGCCAAATGCCTaGTCACAGCTTTTGAGATCAGAGGTAAAAACTTGT +
Preference number: 6 (lower is better)
Translates to: VIVVAPHDLPNA*SQLLRSEVKTC
Trigger: ACAAGTTTTTACCTCTGATCTCAAAAGCTGTGACCAGGCATTTGGCAGGTCATGTGGTGCCACCACAATCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000682674.1
CDS CCA 72 bp ATACTAGTTGCCCTGATCTTGTCTGGAACAATGGGTTaGATCCAATTCTGGCAGCAGGAACACTGGCAACAT +
Preference number: 6 (lower is better)
Translates to: ILVALILSGTMG*IQFWQQEHWQH
Trigger: ATGTTGCCAGTGTTCCTGCTGCCAGAATTGGATCCAACCCATTGTTCCAGACAAGATCAGGGCAACTAGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683592.1
CDS CCA 72 bp GGTTGCAGTAAGACCTCTTACTATTGTTCCTCTGTTTaGCTGGTGTTTTGGGGAGCTGAAGTGGCTCCTTTA +
Preference number: 6 (lower is better)
Translates to: GCSKTSYYCSSV*LVFWGAEVAPL
Trigger: TAAAGGAGCCACTTCAGCTCCCCAAAACACCAGCCAAACAGAGGAACAATAGTAAGAGGTCTTACTGCAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000684410.1
CDS CCA 72 bp ACAAGGTTGCCATCCTCTTACTATTGTTCCTCTGTTTaGCTGGTGTTTTGGGGAGCTGAAGTGGCTCCTTTA +
Preference number: 6 (lower is better)
Translates to: TRLPSSYYCSSV*LVFWGAEVAPL
Trigger: TAAAGGAGCCACTTCAGCTCCCCAAAACACCAGCCAAACAGAGGAACAATAGTAAGAGGATGGCAACCTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683146.1
CDS CCA 72 bp GAGGCTGGGGATCAAGGTAGAGCTAGGCTAACGAGTTaGGAATTTATTCCACAGACTTACTACACAAGCACT +
Preference number: 6 (lower is better)
Translates to: EAGDQGRARLTS*EFIPQTYYTST
Trigger: AGTGCTTGTGTAGTAAGTCTGTGGAATAAATTCCCAACTCGTTAGCCTAGCTCTACCTTGATCCCCAGCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683280.1
CDS CAA 72 bp GCCTTGGACTGTCTCCAGCTAATCCACTTTAACATCTaGGCTTGCTCTCAGATTTGCTTTCTCCTTCCACCA +
Preference number: 6 (lower is better)
Translates to: ALDCLQLIHFNI*ACSQICFLLPP
Trigger: TGGTGGAAGGAGAAAGCAAATCTGAGAGCAAGCCAAGATGTTAAAGTGGATTAGCTGGAGACAGTCCAAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393496.5
CDS CAA 72 bp CTTCCTTCTAGACTCATTTCATCCTGTGTAGGGTCGTaGTCAAAAATCTTCATAGGTGGTGGGAGGGGTGTG +
Preference number: 6 (lower is better)
Translates to: LPSRLISSCVGS*SKIFIGGGRGV
Trigger: CACACCCCTCCCACCACCTATGAAGATTTTTGACAACGACCCTACACAGGATGAAATGAGTCTAGAAGGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393496.5
ENST00000454902.1
ENST00000683592.1
ENST00000684360.1
CDS CAA 72 bp GAAACCGAAGCTCACACAAGACCACAAAGCAAGATTTaGCTGAGTCAAGACTGGGACAGGACTTATCTCACG +
Preference number: 6 (lower is better)
Translates to: ETEAHTRPQSKI*LSQDWDRTYLT
Trigger: CGTGAGATAAGTCCTGTCCCAGTCTTGACTCAGCAAAATCTTGCTTTGTGGTCTTGTGTGAGCTTCGGTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439170.2
ENST00000682636.1
CDS CAA 72 bp CTCCGGAATACCTTACTCACTTTAACAGAGACTTTGTaGCCCAGAATATCCTTGGGTTTACGAGGCCCTGTG +
Preference number: 6 (lower is better)
Translates to: LRNTLLTLTETL*PRISLGLRGPV
Trigger: CACAGGGCCTCGTAAACCCAAGGATATTCTGGGCAACAAAGTCTCTGTTAAAGTGAGTAAGGTATTCCGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484542.1
CDS CAA 72 bp GGCCAGCTGAATCAGAAGCTTCACCTTCTCCTTTGTTaGCTGCCCCAAAAGATGGCCTTAAGTTACTGGATT +
Preference number: 6 (lower is better)
Translates to: GQLNQKLHLLLC*LPQKMALSYWI
Trigger: AATCCAGTAACTTAAGGCCATCTTTTGGGGCAGCAAACAAAGGAGAAGGTGAAGCTTCTGATTCAGCTGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494648.1
CDS CAA 72 bp TATCGGCCAGCTGAATCAGAAGCTTCACCTTCTCCTTaGTTTGCTGCCCCAAAAGATGGCCTTAAGTTACTG +
Preference number: 6 (lower is better)
Translates to: YRPAESEASPSP*FAAPKDGLKLL
Trigger: CAGTAACTTAAGGCCATCTTTTGGGGCAGCAAACAAAGGAGAAGGTGAAGCTTCTGATTCAGCTGGCCGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494648.1
CDS CAA 72 bp TGCCTCATTAGGAAGACTGGGACCTGTCTTCTAACATaGAGAGGTGAGAACAGCTGGTTTCTGGTCCAGAAT +
Preference number: 6 (lower is better)
Translates to: CLIRKTGTCLLT*RGENSWFLVQN
Trigger: ATTCTGGACCAGAAACCAGCTGTTCTCACCTCTCAATGTTAGAAGACAGGTCCCAGTCTTCCTAATGAGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682625.1
CDS CAA 90 bp ATCAACAGAGTGAAGAGACAACCTATAAAAAGGAAATCCTGTCATTaGCAGCAACATAGATGGAACTCGATCCAGCAGCCGGAGCAAGCG +
Preference number: 6 (lower is better)
Translates to: INRVKRQPIKRKSCH*QQHRWNSIQQPEQA
Trigger: CGCTTGCTCCGGCTGCTGGATCGAGTTCCATCTATGTTGCTGCAAATGACAGGATTTCCTTTTTATAGGTTGTCTCTTCACTCTGTTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000483658.2
ENST00000682625.1
ENST00000683280.1
ENST00000683428.1
CDS CAA 90 bp CCACAAAGCTATCGGCCAGCTGAATCAGAAGCTTCACCTTCTCCTTaGTTTGCTGCCCCAAAAGATGGCCTTAAGTTACTGGATTACATT +
Preference number: 6 (lower is better)
Translates to: PQSYRPAESEASPSP*FAAPKDGLKLLDYI
Trigger: AATGTAATCCAGTAACTTAAGGCCATCTTTTGGGGCAGCAAACAAAGGAGAAGGTGAAGCTTCTGATTCAGCTGGCCGATAGCTTTGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494648.1
CDS CAA 90 bp CTGTCCCCATATCCAGGAATCCAAGATAACGGAATTAAAGACTGCTaGGTTATTCTCTGCAGAGTATGCCAAGGTTTCTCACCCACCCAT +
Preference number: 6 (lower is better)
Translates to: LSPYPGIQDNGIKDC*VILCRVCQGFSPTH
Trigger: ATGGGTGGGTGAGAAACCTTGGCATACTCTGCAGAGAATAACCAAGCAGTCTTTAATTCCGTTATCTTGGATTCCTGGATATGGGGACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684410.1
CDS GCA 72 bp TTTACATACCCAGGAGCAACGTATTCAAGTTCCGGTTaGTCTACACCCTCACCATCACTTGGCATTATCAGT +
Preference number: 6 (lower is better)
Translates to: FTYPGATYSSSG*STPSPSLGIIS
Trigger: ACTGATAATGCCAAGTGATGGTGAGGGTGTAGAGCAACCGGAACTTGAATACGTTGCTCCTGGGTATGTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000683512.1
ENST00000683827.1
CDS CCA 72 bp GGGACCTGTCTTCTAACATTGAGAGGTGAGAACAGCTaGTTTCTGGTCCAGAATCCAAAACACTTTGTGGTA +
Preference number: 6 (lower is better)
Translates to: GTCLLTLRGENS*FLVQNPKHFVV
Trigger: TACCACAAAGTGTTTTGGATTCTGGACCAGAAACCAGCTGTTCTCACCTCTCAATGTTAGAAGACAGGTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682625.1
CDS CCA 72 bp TTAAACCATAGCAATTTATTTGGTTGCTCTGGAGGCTaGAAGTCCAAGATCAAGGTCGAGCAGGGTTGGCTT +
Preference number: 6 (lower is better)
Translates to: LNHSNLFGCSGG*KSKIKVEQGWL
Trigger: AAGCCAACCCTGCTCGACCTTGATCTTGGACTTCCAGCCTCCAGAGCAACCAAATAAATTGCTATGGTTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683280.1
CDS CAA 72 bp GTCTCTTTAACAGAGACTTTGTTGCCCAGAATATCCTaGGGTTTACGAGGCCCTGTGGCTTCATTTTTACCC +
Preference number: 6 (lower is better)
Translates to: VSLTETLLPRIS*GLRGPVASFLP
Trigger: GGGTAAAAATGAAGCCACAGGGCCTCGTAAACCCAAGGATATTCTGGGCAACAAAGTCTCTGTTAAAGAGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
ENST00000462213.2
ENST00000682290.1
ENST00000682506.1
CDS CAA 72 bp TATTCATGGGGGAAGCTGAAATCCACCCTGCATACGTaGATACATGTCTCCTCTTTGCTCTCATCCAAGAAG +
Preference number: 6 (lower is better)
Translates to: YSWGKLKSTLHT*IHVSSLLSSKK
Trigger: CTTCTTGGATGAGAGCAAAGAGGAGACATGTATCAACGTATGCAGGGTGGATTTCAGCTTCCCCCATGAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
ENST00000682506.1
ENST00000684480.1
CDS CAA 72 bp GTGGTGGGTCAAATGTGGCAACAGAAGGCACACCTTTaGTCACCTAGGGTTTCAGTAGGGTTCTTAATGAAT +
Preference number: 6 (lower is better)
Translates to: VVGQMWQQKAHL*SPRVSVGFLMN
Trigger: ATTCATTAAGAACCCTACTGAAACCCTAGGTGACAAAAGGTGTGCCTTCTGTTGCCACATTTGACCCACCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393496.5
ENST00000459915.2
ENST00000682363.1
ENST00000683592.1
ENST00000684360.1
CDS CAA 72 bp CTCACTTTAACAGAGACTTTGTTGCCCAGAATATCCTaGGGTTTACGAGGCCCTGTGGCTTCATTTTTACCC +
Preference number: 6 (lower is better)
Translates to: LTLTETLLPRIS*GLRGPVASFLP
Trigger: GGGTAAAAATGAAGCCACAGGGCCTCGTAAACCCAAGGATATTCTGGGCAACAAAGTCTCTGTTAAAGTGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484542.1
CDS CAA 72 bp ACTATGCTCTTTCCAGCCTCCATGCCTGTGTTCGGTTaGTCTAGATTGGAACAACCTTCTTCCTTTTCTGAG +
Preference number: 6 (lower is better)
Translates to: TMLFPASMPVFG*SRLEQPSSFSE
Trigger: CTCAGAAAAGGAAGAAGGTTGTTCCAATCTAGACAAACCGAACACAGGCATGGAGGCTGGAAAGAGCATAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683280.1
CDS CAA 90 bp AATACCTTACTCACTTTAACAGAGACTTTGTTGCCCAGAATATCCTaGGGTTTACGAGGCCCTGTGGCTTCATTTTTACCCGTGTTCTCC +
Preference number: 6 (lower is better)
Translates to: NTLLTLTETLLPRIS*GLRGPVASFLPVFS
Trigger: GGAGAACACGGGTAAAAATGAAGCCACAGGGCCTCGTAAACCCAAGGATATTCTGGGCAACAAAGTCTCTGTTAAAGTGAGTAAGGTATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484542.1
CDS TCA 72 bp AAGTCCTTGAGGAGCAACTGGTATTTTGTTATTCTCTaGATGGGCTTGATGAGGAAGTCACTCAGTGTCAGC +
Preference number: 6 (lower is better)
Translates to: KSLRSNWYFVIL*MGLMRKSLSVS
Trigger: GCTGACACTGAGTGACTTCCTCATCAAGCCCATTCAGAGAATAACAAAATACCAGTTGCTCCTCAAGGACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
ENST00000393496.5
ENST00000459915.2
ENST00000682290.1
ENST00000682506.1
ENST00000683592.1
ENST00000684360.1
CDS TCA 72 bp AGAAGGCAATGGAGCCAGAACTTGAGCCTAAGTTTGTaGCTCATGGATTCAAGCATTTCTGAGGTCACAAAG +
Preference number: 6 (lower is better)
Translates to: RRQWSQNLSLSL*LMDSSISEVTK
Trigger: CTTTGTGACCTCAGAAATGCTTGAATCCATGAGTCACAAACTTAGGCTCAAGTTCTGGCTCCATTGCCTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477496.5
CDS TCA 72 bp ACTGGGAGTATTCTGAAATGGTTTCTTATACATAGGTaGTTGTGGTGGCACCACATGACCTGCCAAATGCCT +
Preference number: 6 (lower is better)
Translates to: TGSILKWFLIHR*LWWHHMTCQMP
Trigger: AGGCATTTGGCAGGTCATGTGGTGCCACCACAATCACCTATGTATAAGAAACCATTTCAGAATACTCCCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682674.1
CDS TCA 72 bp TGTGTGACCCTGGGTAAATTATTCAACCTCTTGGAGTaGCGTTTTCCTCATCTTGTCACTGTCCACTGTGTT +
Preference number: 6 (lower is better)
Translates to: CVTLGKLFNLLE*RFPHLVTVHCV
Trigger: AACACAGTGGACAGTGACAAGATGAGGAAAACGTCACTCCAAGAGGTTGAATAATTTACCCAGGGTCACACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682575.1
CDS TCA 72 bp GTAGCTTGCTTCTTAATCAGTATAATAAGGCAAAGGTaGTGGGAGATCACTTCTGTGGCTAGGCTATGTGCG +
Preference number: 6 (lower is better)
Translates to: VACFLISIIRQR*WEITSVARLCA
Trigger: CGCACATAGCCTAGCCACAGAAGTGATCTCCCATCACCTTTGCCTTATTATACTGATTAAGAAGCAAGCTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683280.1
CDS GCA 72 bp TCATGCTGCTTCTCATGGAGAAATTCCAATAACTCTTaGACCTGGGCTGCCAGATCAATGTCTTTTTCACAG +
Preference number: 6 (lower is better)
Translates to: SCCFSWRNSNNS*TWAARSMSFSQ
Trigger: CTGTGAAAAAGACATTGATCTGGCAGCCCAGGTGCAAGAGTTATTGGAATTTCTCCATGAGAAGCAGCATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 21 transcripts:
ENST00000240874.7
ENST00000354186.8
ENST00000360013.7
ENST00000393501.5
ENST00000460856.5
ENST00000484224.6
ENST00000682277.1
ENST00000682506.1
ENST00000682540.1
ENST00000682575.1
ENST00000682674.1
ENST00000682695.1
ENST00000683146.1
ENST00000683356.1
ENST00000683592.1
ENST00000683922.1
ENST00000684186.1
ENST00000684276.1
ENST00000684374.1
ENST00000684382.1
ENST00000684410.1
CDS GCA 72 bp GTTTTCTTTAGTGGACTTGGCCAGTGGAAGGCAGTGTaGATAATGGATATCAGAAACACCTGGGTTCAAATC +
Preference number: 6 (lower is better)
Translates to: VFFSGLGQWKAV*IMDIRNTWVQI
Trigger: GATTTGAACCCAGGTGTTTCTGATATCCATTATGCACACTGCCTTCCACTGGCCAAGTCCACTAAAGAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682575.1
CDS GCA 72 bp GGAATTAAAGACTGCTTGGTTATTCTCTGCAGAGTATaGCAAGGTTTCTCACCCACCCATTGTAGGACAAGA +
Preference number: 6 (lower is better)
Translates to: GIKDCLVILCRV*QGFSPTHCRTR
Trigger: TCTTGTCCTACAATGGGTGGGTGAGAAACCTTGGCATACTCTGCAGAGAATAACCAAGCAGTCTTTAATTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684410.1
CDS CAA 72 bp TTGAGACCTCATCACAGCTGTGCTCCTTTCTTTCCGTaGATACTCAATGGGCGATTGCAGTGCATTCAAAAA +
Preference number: 6 (lower is better)
Translates to: LRPHHSCAPFFP*ILNGRLQCIQK
Trigger: TTTTTGAATGCACTGCAATCGCCCATTGAGTATCAACGGAAAGAAAGGAGCACAGCTGTGATGAGGTCTCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
ENST00000393496.5
ENST00000459915.2
ENST00000682290.1
ENST00000682363.1
ENST00000682506.1
ENST00000683592.1
ENST00000684360.1
CDS CAA 72 bp CTGAGGGACTGGGATTTAGGACTGCAACATATGAATTaGGGAAGGGCACAATTCAGTTCACAACACCCTATA +
Preference number: 6 (lower is better)
Translates to: LRDWDLGLQHMN*GRAQFSSQHPI
Trigger: TATAGGGTGTTGTGAACTGAATTGTGCCCTTCCCAAATTCATATGTTGCAGTCCTAAATCCCAGTCCCTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683280.1
CDS CAA 90 bp CTGAGACCCTCCACAAACCTACTTGTTATGGAAATCGTAGATCTCTaGGATGTTGCCAAAGATGATATGCTCTTTATTGAGGATCCCAGG +
Preference number: 6 (lower is better)
Translates to: LRPSTNLLVMEIVDL*DVAKDDMLFIEDPR
Trigger: CCTGGGATCCTCAATAAAGAGCATATCATCTTTGGCAACATCCAAGAGATCTACGATTTCCATAACAAGTAGGTTTGTGGAGGGTCTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494648.1
CDS TCA 72 bp ACACATGTGCATGCACTTGAGGAGACCATGCGTCTTTaGGATTCTGGGTCTACTTTCATGATAGAATTTGCT +
Preference number: 6 (lower is better)
Translates to: THVHALEETMRL*DSGSTFMIEFA
Trigger: AGCAAATTCTATCATGAAAGTAGACCCAGAATCTCAAAGACGCATGGTCTCCTCAAGTGCATGCACATGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473056.1
CDS TCA 72 bp AAGAGTTCCCAGATGATTCTAGCATACATTGAGAGGTaGGAACAGCTGGTTTCTGGTCCAGAATCCAAAACA +
Preference number: 6 (lower is better)
Translates to: KSSQMILAYIER*EQLVSGPESKT
Trigger: TGTTTTGGATTCTGGACCAGAAACCAGCTGTTCTCACCTCTCAATGTATGCTAGAATCATCTGGGAACTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000683280.1
ENST00000683428.1
CDS TCA 72 bp CATGTGTCCCCTAATTTATGTCTTGCCTCTCCATTTTaGATTCTAGTTATCTTGGCAGGCACCCTGAATTCC +
Preference number: 6 (lower is better)
Translates to: HVSPNLCLASPF*ILVILAGTLNS
Trigger: GGAATTCAGGGTGCCTGCCAAGATAACTAGAATTCAAAATGGAGAGGCAAGACATAAATTAGGGGACACATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000684186.1
CDS GCA 72 bp GAGGATTTAAACTGTACAGACAGGGATCTGGGTGATTaGTTGCAGAGTAGAAGTGAAATCACAGAAAGCAGA +
Preference number: 6 (lower is better)
Translates to: EDLNCTDRDLGD*LQSRSEITESR
Trigger: TCTGCTTTCTGTGATTTCACTTCTACTCTGCAAGCAATCACCCAGATCCCTGTCTGTACAGTTTAAATCCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000682674.1
ENST00000684186.1
CDS GCA 72 bp CAAGATAACGGAATTAAAGACTGCTTGGTTATTCTCTaGAGAGTATGCCAAGGTTTCTCACCCACCCATTGT +
Preference number: 6 (lower is better)
Translates to: QDNGIKDCLVIL*RVCQGFSPTHC
Trigger: ACAATGGGTGGGTGAGAAACCTTGGCATACTCTGCAGAGAATAACCAAGCAGTCTTTAATTCCGTTATCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684410.1
CDS CCA 72 bp TGCTTCTCATGGAGAAATTCCAATAACTCTTGCACCTaGGCTGCCAGATCAATGTCTTTTTCACAGATCAAC +
Preference number: 6 (lower is better)
Translates to: CFSWRNSNNSCT*AARSMSFSQIN
Trigger: GTTGATCTGTGAAAAAGACATTGATCTGGCAGCCCAGGTGCAAGAGTTATTGGAATTTCTCCATGAGAAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 21 transcripts:
ENST00000240874.7
ENST00000354186.8
ENST00000360013.7
ENST00000393501.5
ENST00000460856.5
ENST00000484224.6
ENST00000682277.1
ENST00000682506.1
ENST00000682540.1
ENST00000682575.1
ENST00000682674.1
ENST00000682695.1
ENST00000683146.1
ENST00000683356.1
ENST00000683592.1
ENST00000683922.1
ENST00000684186.1
ENST00000684276.1
ENST00000684374.1
ENST00000684382.1
ENST00000684410.1
CDS CAA 72 bp GTCATTTGTTGCTATGCAGGTATAAATCCCACTGTCTaGGGGCATCAGATTACAGATCTTCAGGGTGATTTC +
Preference number: 6 (lower is better)
Translates to: VICCYAGINPTV*GHQITDLQGDF
Trigger: GAAATCACCCTGAAGATCTGTAATCTGATGCCCCAAGACAGTGGGATTTATACCTGCATAGCAACAAATGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291478.9
ENST00000354186.8
ENST00000360013.7
ENST00000682290.1
ENST00000682506.1
CDS CAA 90 bp CTCCAGCTCTTTGAGGAAGATGTTGTTATGGAAATCGTAGATCTCTaGGATGTTGCCAAAGATGATATGCTCTTTATTGAGGATCCCAGG +
Preference number: 6 (lower is better)
Translates to: LQLFEEDVVMEIVDL*DVAKDDMLFIEDPR
Trigger: CCTGGGATCCTCAATAAAGAGCATATCATCTTTGGCAACATCCAAGAGATCTACGATTTCCATAACAACATCTTCCTCAAAGAGCTGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 20 transcripts:
ENST00000240874.7
ENST00000354186.8
ENST00000360013.7
ENST00000393501.5
ENST00000460856.5
ENST00000484224.6
ENST00000682277.1
ENST00000682506.1
ENST00000682540.1
ENST00000682575.1
ENST00000682695.1
ENST00000683146.1
ENST00000683356.1
ENST00000683592.1
ENST00000683922.1
ENST00000684276.1
ENST00000684360.1
ENST00000684374.1
ENST00000684382.1
ENST00000684410.1
CDS CAA 90 bp AAAGCTATCGGCCAGCTGAATCAGAAGCTTCACCTTCTCCTTTGTTaGCTGCCCCAAAAGATGGCCTTAAGTTACTGGATTACATTTATT +
Preference number: 6 (lower is better)
Translates to: KAIGQLNQKLHLLLC*LPQKMALSYWITFI
Trigger: AATAAATGTAATCCAGTAACTTAAGGCCATCTTTTGGGGCAGCAAACAAAGGAGAAGGTGAAGCTTCTGATTCAGCTGGCCGATAGCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494648.1
CDS CAA 90 bp CATGGAAGTTGTTATATCCAGAGCAGCAGTATAGGCAGCTTGTTTTaGACCAACTTTTCTATTGCATTGACAAGGTCTGCAGCAGTAGGT +
Preference number: 6 (lower is better)
Translates to: HGSCYIQSSSIGSLF*TNFSIALTRSAAVG
Trigger: ACCTACTGCTGCAGACCTTGTCAATGCAATAGAAAAGTTGGTCAAAAACAAGCTGCCTATACTGCTGCTCTGGATATAACAACTTCCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000682290.1
CDS CAA 90 bp ATTTATTGGGTGCCCAGTATGTGCCAGATGATAAGAATACAAAATTaGGCTGGAAGATACATAGTTCCAGCCTTCTGGGTATCTCTGGTC +
Preference number: 6 (lower is better)
Translates to: IYWVPSMCQMIRIQN*AGRYIVPAFWVSLV
Trigger: GACCAGAGATACCCAGAAGGCTGGAACTATGTATCTTCCAGCCAAATTTTGTATTCTTATCATCTGGCACATACTGGGCACCCAATAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683280.1
CDS TCA 72 bp GATACCCAGAGATGCCCCAACATCACAATTTATCTTTaGATGGCTGGTCATTTTAGCAAGGTCACTGTTACA +
Preference number: 6 (lower is better)
Translates to: DTQRCPNITIYL*MAGHFSKVTVT
Trigger: TGTAACAGTGACCTTGCTAAAATGACCAGCCATTCAAAGATAAATTGTGATGTTGGGGCATCTCTGGGTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462213.2
CDS TCA 72 bp GAGCCTAAGTTTGTGACTCATGGATTCAAGCATTTCTaGGGTCACAAAGATAAGGAGGATTCACATCTAGTG +
Preference number: 6 (lower is better)
Translates to: EPKFVTHGFKHF*GHKDKEDSHLV
Trigger: CACTAGATGTGAATCCTCCTTATCTTTGTGACCTCAGAAATGCTTGAATCCATGAGTCACAAACTTAGGCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477496.5
CDS TCA 72 bp GCCCCTTCTTCTGTCCCCACAGCACCATATGTATGGTaGTTATGGCATTCATTACTACATTCTGATTTGTTT +
Preference number: 6 (lower is better)
Translates to: APSSVPTAPYVW*LWHSLLHSDLF
Trigger: AAACAAATCAGAATGTAGTAATGAATGCCATAATCACCATACATATGGTGCTGTGGGGACAGAAGAAGGGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683280.1
CDS GCA 72 bp CAGTATAGGCAGCTTGTTTTTGACCAACTTTTCTATTaGATTGACAAGGTCTGCAGCAGTAGGTACTTCAGT +
Preference number: 6 (lower is better)
Translates to: QYRQLVFDQLFY*IDKVCSSRYFS
Trigger: ACTGAAGTACCTACTGCTGCAGACCTTGTCAATGCAATAGAAAAGTTGGTCAAAAACAAGCTGCCTATACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000682290.1
CDS CCA 72 bp TGTCTAAATAGGGGACTAGAAATAAGCTGGGTCAATTaGGGTTGTTTCCCTGAGGATTTAAACTGTACAGAC +
Preference number: 6 (lower is better)
Translates to: CLNRGLEISWVN*GCFPEDLNCTD
Trigger: GTCTGTACAGTTTAAATCCTCAGGGAAACAACCCCAATTGACCCAGCTTATTTCTAGTCCCCTATTTAGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000682674.1
ENST00000684186.1
CDS CCA 72 bp TCCCCCAAAAGAGTCATTGTAAGTGTAGGTGTCACATaGAGACTTGGGAAAGAAATACTTAAGAAGTCATCC +
Preference number: 6 (lower is better)
Translates to: SPKRVIVSVGVT*RLGKEILKKSS
Trigger: GGATGACTTCTTAAGTATTTCTTTCCCAAGTCTCCATGTGACACCTACACTTACAATGACTCTTTTGGGGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000684410.1
CDS CCA 72 bp ATCCAGGAATCCAAGATAACGGAATTAAAGACTGCTTaGTTATTCTCTGCAGAGTATGCCAAGGTTTCTCAC +
Preference number: 6 (lower is better)
Translates to: IQESKITELKTA*LFSAEYAKVSH
Trigger: GTGAGAAACCTTGGCATACTCTGCAGAGAATAACCAAGCAGTCTTTAATTCCGTTATCTTGGATTCCTGGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684410.1
CDS CCA 72 bp GAGGCCCCCAATGATCCTCTCTCCTTGAGTATATACTaGCTTTGTAGCTTGCTTCTTAATCAGTATAATAAG +
Preference number: 6 (lower is better)
Translates to: EAPNDPLSLSIY*LCSLLLNQYNK
Trigger: CTTATTATACTGATTAAGAAGCAAGCTACAAAGCCAGTATATACTCAAGGAGAGAGGATCATTGGGGGCCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000683280.1
CDS CAA 72 bp AGGATGTCCTTTTCCCAATATATGTTCTTGGCACCCTaGTTGAAACTAAAAAGCTTCTGCACAGCAAGGGAA +
Preference number: 6 (lower is better)
Translates to: RMSFSQYMFLAP*LKLKSFCTARE
Trigger: TTCCCTTGCTGTGCAGAAGCTTTTTAGTTTCAACAAGGGTGCCAAGAACATATATTGGGAAAAGGACATCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000483658.2
ENST00000682625.1
ENST00000683280.1
ENST00000683428.1
CDS CAA 90 bp TGTTGCATATGGTGTCAGCACTCAAACACTGGTTCTGTGGTACTGTaGAGAATAAGCAGTAGTAATTCCCTACCATGTGTTTGCATTTTT +
Preference number: 6 (lower is better)
Translates to: CCIWCQHSNTGSVVL*RISSSNSLPCVCIF
Trigger: AAAAATGCAAACACATGGTAGGGAATTACTACTGCTTATTCTCAACAGTACCACAGAACCAGTGTTTGAGTGCTGACACCATATGCAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393496.5
ENST00000459915.2
ENST00000682363.1
ENST00000683592.1
ENST00000684360.1
CDS TCA 72 bp CCAGCCTTCTGGGTATCTCTGGTCTATTGCGGTAAATaGATAAAAGAACCGGAATATAAACATAAGTGCTAC +
Preference number: 6 (lower is better)
Translates to: PAFWVSLVYCGK*IKEPEYKHKCY
Trigger: GTAGCACTTATGTTTATATTCCGGTTCTTTTATTCATTTACCGCAATAGACCAGAGATACCCAGAAGGCTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683280.1
CDS CCA 72 bp CAGTATGTGCCAGATGATAAGAATACAAAATTTGGCTaGAAGATACATAGTTCCAGCCTTCTGGGTATCTCT +
Preference number: 6 (lower is better)
Translates to: QYVPDDKNTKFG*KIHSSSLLGIS
Trigger: AGAGATACCCAGAAGGCTGGAACTATGTATCTTCCAGCCAAATTTTGTATTCTTATCATCTGGCACATACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683280.1
CDS CAA 72 bp AGGAGGATCACTGATGAACCACTTTTACTAACTTGGTaGGAACTCAAATCCATACGCTTTCATCCCATTAGA +
Preference number: 6 (lower is better)
Translates to: RRITDEPLLLTW*ELKSIRFHPIR
Trigger: TCTAATGGGATGAAAGCGTATGGATTTGAGTTCCAACCAAGTTAGTAAAAGTGGTTCATCAGTGATCCTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684374.1
CDS CAA 72 bp AAAAGTATTCACAGAACAAGTAATCAGCCATGGAAGTaGTTATATCCAGAGCAGCAGTATAGGCAGCTTGTT +
Preference number: 6 (lower is better)
Translates to: KSIHRTSNQPWK*LYPEQQYRQLV
Trigger: AACAAGCTGCCTATACTGCTGCTCTGGATATAACAACTTCCATGGCTGATTACTTGTTCTGTGAATACTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682290.1
CDS CAA 72 bp ATTCAAGTTCCGGTTGCTCTACACCCTCACCATCACTaGGCATTATCAGTCTATTTAATTTTAACCATGCTA +
Preference number: 6 (lower is better)
Translates to: IQVPVALHPHHH*ALSVYLILTML
Trigger: TAGCATGGTTAAAATTAAATAGACTGATAATGCCAAGTGATGGTGAGGGTGTAGAGCAACCGGAACTTGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000683512.1
ENST00000683827.1
CDS CAA 72 bp GATCCTCTCTCCTTGAGTATATACTGGCTTTGTAGCTaGCTTCTTAATCAGTATAATAAGGCAAAGGTGATG +
Preference number: 6 (lower is better)
Translates to: DPLSLSIYWLCS*LLNQYNKAKVM
Trigger: CATCACCTTTGCCTTATTATACTGATTAAGAAGCAAGCTACAAAGCCAGTATATACTCAAGGAGAGAGGATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683280.1
CDS CAA 90 bp GACAGTTGCATGAGGTGTATCCAAAAGATTGCGTTCTTACACAGTTaGTTCCTTAGCAATGTTCTATGTGTTCTCCTATGTTTACTATTC +
Preference number: 6 (lower is better)
Translates to: DSCMRCIQKIAFLHS*FLSNVLCVLLCLLF
Trigger: GAATAGTAAACATAGGAGAACACATAGAACATTGCTAAGGAACAAACTGTGTAAGAACGCAATCTTTTGGATACACCTCATGCAACTGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000683280.1
ENST00000683428.1
CDS CAA 90 bp CATATAGGCCACAGTGTGTTTATCCATTCTCCTCCTAATGAATTATaGGGTTGTTTCCAGTGTTTGGCTAATATGAATAAGGTTGATGTG +
Preference number: 6 (lower is better)
Translates to: HIGHSVFIHSPPNEL*GCFQCLANMNKVDV
Trigger: CACATCAACCTTATTCATATTAGCCAAACACTGGAAACAACCCAATAATTCATTAGGAGGAGAATGGATAAACACACTGTGGCCTATATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000683512.1
ENST00000683827.1
CDS CAA 72 bp TCCACAAACCTACTTGTTATGGAAATCGTAGATCTCTaGGATGTTGCCAAAGATGATATGCTCTTTATTGAG +
Preference number: 6 (lower is better)
Translates to: STNLLVMEIVDL*DVAKDDMLFIE
Trigger: CTCAATAAAGAGCATATCATCTTTGGCAACATCCAAGAGATCTACGATTTCCATAACAAGTAGGTTTGTGGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494648.1
CDS TCA 72 bp GTCTTAGCCATAAAATATTTGCCTAGACTAATATCCTaGAGGGTTTCCCTATGTTTTCTTCTAGCAATTTCA +
Preference number: 6 (lower is better)
Translates to: VLAIKYLPRLIS*RVSLCFLLAIS
Trigger: TGAAATTGCTAGAAGAAAACATAGGGAAACCCTTCAGGATATTAGTCTAGGCAAATATTTTATGGCTAAGAC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000682625.1
ENST00000683280.1
ENST00000683428.1