Pregenerated sensors for KAAG1 (Homo sapiens)
Ensembl gene IDs: ENSG00000146049Ensembl transcript IDs: ENST00000274766.2
Found 74 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTGTGTGCGTCCTCCTCTCTCCTGCCCTCACTAGGCGTGCCTGTTTaGAGGCCCCGCGCGTTTCCGGCTCCTGCTCAGAAGCTGTCCACC | + |
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Preference number: 1 (lower is better) Translates to: VCASSSLLPSLGVPV*RPRAFPAPAQKLST Trigger: GGTGGACAGCTTCTGAGCAGGAGCCGGAAACGCGCGGGGCCTTCAAACAGGCACGCCTAGTGAGGGCAGGAGAGAGGAGGACGCACACAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000274766.2 |
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| 3UTR TCA 90 bp | GGCTCCTGCTCAGAAGCTGTCCACCTTGATTCTGCCCGTAGCAGGTaGACCTGGTGTGGTGCGCGCACTGCGGGTCCTGATTGGCTGTGC | + |
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Preference number: 1 (lower is better) Translates to: GSCSEAVHLDSARSR*TWCGARTAGPDWLC Trigger: GCACAGCCAATCAGGACCCGCAGTGCGCGCACCACACCAGGTTCACCTGCTACGGGCAGAATCAAGGTGGACAGCTTCTGAGCAGGAGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000274766.2 |
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| 3UTR TCA 90 bp | GAGAGAAAAGAAAAATTAGGCTGTTTGGAAAGGGTAGCACAGATATaGTGTAAGAAATTGGGTTTCACCATATTTGTGTGTGTGTGTGTG | + |
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Preference number: 1 (lower is better) Translates to: ERKEKLGCLERVAQI*CKKLGFTIFVCVCV Trigger: CACACACACACACACAAATATGGTGAAACCCAATTTCTTACATCATATCTGTGCTACCCTTTCCAAACAGCCTAATTTTTCTTTTCTCTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000274766.2 |
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| 3UTR CAA 90 bp | TGTGTGTGCGTCCTCCTCTCTCCTGCCCTCACTAGGCGTGCCTGTTaGAAGGCCCCGCGCGTTTCCGGCTCCTGCTCAGAAGCTGTCCAC | + |
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Preference number: 2 (lower is better) Translates to: CVCVLLSPALTRRAC*KAPRVSGSCSEAVH Trigger: GTGGACAGCTTCTGAGCAGGAGCCGGAAACGCGCGGGGCCTTCAAACAGGCACGCCTAGTGAGGGCAGGAGAGAGGAGGACGCACACACA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000274766.2 |
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| 3UTR-3UTR CCA 90 bp | GCGTTTCCGGCTCCTGCTCAGAAGCTGTCCACCTTGATTCTGCCCGTAGCAGGTAGTGTCTCCTCTGGGTaGACGCCTAGGCGCACGGCC | + |
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Preference number: 2 (lower is better) Translates to: AFPAPAQKLSTLILPVAGSVSSG*TPRRTA Trigger: GGCCGTGCGCCTAGGCGTCCACCCAGAGGAGACACT...ACCTGCTACGGGCAGAATCAAGGTGGACAGCTTCTGAGCAGGAGCCGGAAACGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000274766.2 |
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| 3UTR-3UTR TCA 90 bp | TTTCACCATATTTGTGTGTGTGTGTGTGTGTGCGTCCTCCTCTCTCCTGCCCTCGCGCACTGCGGGTCCTaGTTGGCTGTGCACGCCACG | + |
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Preference number: 2 (lower is better) Translates to: FHHICVCVCVCVLLSPALAHCGS*LAVHAT Trigger: CGTGGCGTGCACAGCCAATCAGGACCCGCAGTGCGC...GAGGGCAGGAGAGAGGAGGACGCACACACACACACACACACAAATATGGTGAAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000274766.2 |
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| 3UTR-3UTR TCA 90 bp | GGTTTCACCATATTTGTGTGTGTGTGTGTGTGTGCGTCCTCCTCTCTCCTGCCCTCTGCCCGTAGCAGGTaGACCTGGTGTGGTGCGCGC | + |
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Preference number: 2 (lower is better) Translates to: GFTIFVCVCVCASSSLLPSARSR*TWCGAR Trigger: GCGCGCACCACACCAGGTTCACCTGCTACGGGCAGA...GGGCAGGAGAGAGGAGGACGCACACACACACACACACACAAATATGGTGAAACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000274766.2 |
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| 3UTR-3UTR TCA 90 bp | TTGGGTTTCACCATATTTGTGTGTGTGTGTGTGTGTGCGTCCTCCTCTCTCCTGCTAGGCGTGCCTGTTTaGAGGCCCCGCGCGTTTCCG | + |
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Preference number: 2 (lower is better) Translates to: LGFTIFVCVCVCASSSLLLGVPV*RPRAFP Trigger: CGGAAACGCGCGGGGCCTTCAAACAGGCACGCCTAG...CAGGAGAGAGGAGGACGCACACACACACACACACACAAATATGGTGAAACCCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000274766.2 |
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| 3UTR-3UTR CCA 90 bp | TTGGGTTTCACCATATTTGTGTGTGTGTGTGTGTGTGCGTCCTCCTCTCTCCTGCAGGTGAACCTGGTGTaGTGCGCGCACTGCGGGTCC | + |
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Preference number: 2 (lower is better) Translates to: LGFTIFVCVCVCASSSLLQVNLV*CAHCGS Trigger: GGACCCGCAGTGCGCGCACCACACCAGGTTCACCTG...CAGGAGAGAGGAGGACGCACACACACACACACACACAAATATGGTGAAACCCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000274766.2 |
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| 3UTR TCA 72 bp | TCCTCCTCTCTCCTGCCCTCACTAGGCGTGCCTGTTTaGAGGCCCCGCGCGTTTCCGGCTCCTGCTCAGAAG | + |
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Preference number: 3 (lower is better) Translates to: SSSLLPSLGVPV*RPRAFPAPAQK Trigger: CTTCTGAGCAGGAGCCGGAAACGCGCGGGGCCTTCAAACAGGCACGCCTAGTGAGGGCAGGAGAGAGGAGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000274766.2 |
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| 3UTR GCA 72 bp | CGTGCCTGTTTGAAGGCCCCGCGCGTTTCCGGCTCCTaGTCAGAAGCTGTCCACCTTGATTCTGCCCGTAGC | + |
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Preference number: 3 (lower is better) Translates to: RACLKAPRVSGS*SEAVHLDSARS Trigger: GCTACGGGCAGAATCAAGGTGGACAGCTTCTGAGCAGGAGCCGGAAACGCGCGGGGCCTTCAAACAGGCACG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000274766.2 |
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| 3UTR TCA 72 bp | CAGGTGAACCTGGTGTGGTGCGCGCACTGCGGGTCCTaGTTGGCTGTGCACGCCACGGTGAAAAACTTGAGC | + |
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Preference number: 3 (lower is better) Translates to: QVNLVWCAHCGS*LAVHATVKNLS Trigger: GCTCAAGTTTTTCACCGTGGCGTGCACAGCCAATCAGGACCCGCAGTGCGCGCACCACACCAGGTTCACCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000274766.2 |
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| 3UTR TCA 72 bp | TCAGAAGCTGTCCACCTTGATTCTGCCCGTAGCAGGTaGACCTGGTGTGGTGCGCGCACTGCGGGTCCTGAT | + |
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Preference number: 3 (lower is better) Translates to: SEAVHLDSARSR*TWCGARTAGPD Trigger: ATCAGGACCCGCAGTGCGCGCACCACACCAGGTTCACCTGCTACGGGCAGAATCAAGGTGGACAGCTTCTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000274766.2 |
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| 3UTR-3UTR CAA 90 bp | GGTTTCACCATATTTGTGTGTGTGTGTGTGTGTGCGTCCTCCTCTCTCCTGCCCACTAGGCGTGCCTGTTaGAAGGCCCCGCGCGTTTCC | + |
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Preference number: 3 (lower is better) Translates to: GFTIFVCVCVCASSSLLPTRRAC*KAPRVS Trigger: GGAAACGCGCGGGGCCTTCAAACAGGCACGCCTAGT...GGGCAGGAGAGAGGAGGACGCACACACACACACACACACAAATATGGTGAAACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000274766.2 |
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| 3UTR TCA 72 bp | GAAAAATTAGGCTGTTTGGAAAGGGTAGCACAGATATaGTGTAAGAAATTGGGTTTCACCATATTTGTGTGT | + |
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Preference number: 3 (lower is better) Translates to: EKLGCLERVAQI*CKKLGFTIFVC Trigger: ACACACAAATATGGTGAAACCCAATTTCTTACATCATATCTGTGCTACCCTTTCCAAACAGCCTAATTTTTC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000274766.2 |
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| CDS-3UTR TCA 90 bp | CTGCCCGTAGCAGGTGAACCTGGTGTGGTGCGCGCACTGCGGGTCCTGATTGGCTCTGCCCGTAGCAGGTaGACCTGGTGTGGTGCGCGC | + |
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Preference number: 4 (lower is better) Translates to: LPVAGEPGVVRALRVLIGSARSR*TWCGAR Trigger: GCGCGCACCACACCAGGTTCACCTGCTACGGGCAGA...GCCAATCAGGACCCGCAGTGCGCGCACCACACCAGGTTCACCTGCTACGGGCAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000274766.2 |
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| CDS-3UTR GCA 90 bp | CTCACTAGGCGTGCCTGTTTGAAGGCCCCGCGCGTTTCCGGCTCCTGCTCAGAAATCCCGCGCCCTGGGTaGGGTGAGGCCGCTGGGACA | + |
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Preference number: 4 (lower is better) Translates to: LTRRACLKAPRVSGSCSEIPRPG*GEAAGT Trigger: TGTCCCAGCGGCCTCACCGCACCCAGGGCGCGGGAT...TTCTGAGCAGGAGCCGGAAACGCGCGGGGCCTTCAAACAGGCACGCCTAGTGAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000274766.2 |
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| CDS-3UTR CCA 90 bp | CTGCCCGTAGCAGGTGAACCTGGTGTGGTGCGCGCACTGCGGGTCCTGATTGGCCAGGTGAACCTGGTGTaGTGCGCGCACTGCGGGTCC | + |
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Preference number: 4 (lower is better) Translates to: LPVAGEPGVVRALRVLIGQVNLV*CAHCGS Trigger: GGACCCGCAGTGCGCGCACCACACCAGGTTCACCTG...GCCAATCAGGACCCGCAGTGCGCGCACCACACCAGGTTCACCTGCTACGGGCAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000274766.2 |
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| CDS-3UTR GCA 90 bp | CCGCGCGTTTCCGGCTCCTGCTCAGAAGCTGTCCACCTTGATTCTGCCCGTAGCCTGGGACAGCGGAGGTaGCTCCCGACGCGAAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: PRVSGSCSEAVHLDSARSLGQRR*LPTRSS Trigger: GCTGCTTCGCGTCGGGAGGCACCTCCGCTGTCCCAG...GCTACGGGCAGAATCAAGGTGGACAGCTTCTGAGCAGGAGCCGGAAACGCGCGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000274766.2 |
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| CDS-3UTR TCA 90 bp | GTCCTGATTGGCTGTGCACGCCACGGTGAAAAACTTGAGCGTCTACTCCGAGTCCGCGAAGCAGCGAGCTaGGGCGGCGGCCAGCGGGGA | + |
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Preference number: 4 (lower is better) Translates to: VLIGCARHGEKLERLLRVREAAS*GGGQRG Trigger: TCCCCGCTGGCCGCCGCCTCAGCTCGCTGCTTCGCG...GACTCGGAGTAGACGCTCAAGTTTTTCACCGTGGCGTGCACAGCCAATCAGGAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000274766.2 |
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| CDS-3UTR TCA 90 bp | CTCACTAGGCGTGCCTGTTTGAAGGCCCCGCGCGTTTCCGGCTCCTGCTCAGAACTAGGCGTGCCTGTTTaGAGGCCCCGCGCGTTTCCG | + |
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Preference number: 4 (lower is better) Translates to: LTRRACLKAPRVSGSCSELGVPV*RPRAFP Trigger: CGGAAACGCGCGGGGCCTTCAAACAGGCACGCCTAG...TTCTGAGCAGGAGCCGGAAACGCGCGGGGCCTTCAAACAGGCACGCCTAGTGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000274766.2 |
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| 3UTR CAA 72 bp | GTCCTCCTCTCTCCTGCCCTCACTAGGCGTGCCTGTTaGAAGGCCCCGCGCGTTTCCGGCTCCTGCTCAGAA | + |
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Preference number: 4 (lower is better) Translates to: VLLSPALTRRAC*KAPRVSGSCSE Trigger: TTCTGAGCAGGAGCCGGAAACGCGCGGGGCCTTCAAACAGGCACGCCTAGTGAGGGCAGGAGAGAGGAGGAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000274766.2 |
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| CDS-3UTR TCA 90 bp | GGTTTCACCATATTTGTGTGTGTGTGTGTGTGTGCGTCCTCCTCTCTCCTGCCCGCGCCCTGGGTGCGGTaGGGCCGCTGGGACAGCGGA | + |
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Preference number: 4 (lower is better) Translates to: GFTIFVCVCVCASSSLLPAPWVR*GRWDSG Trigger: TCCGCTGTCCCAGCGGCCTCACCGCACCCAGGGCGC...GGGCAGGAGAGAGGAGGACGCACACACACACACACACACAAATATGGTGAAACC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000274766.2 |
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| CDS-3UTR CCA 90 bp | CCGCGCGTTTCCGGCTCCTGCTCAGAAGCTGTCCACCTTGATTCTGCCCGTAGCCTACACCCCGCGGACTaGCCACCGAATCCGGAAGCT | + |
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Preference number: 4 (lower is better) Translates to: PRVSGSCSEAVHLDSARSLHPAD*PPNPEA Trigger: AGCTTCCGGATTCGGTGGCCAGTCCGCGGGGTGTAG...GCTACGGGCAGAATCAAGGTGGACAGCTTCTGAGCAGGAGCCGGAAACGCGCGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000274766.2 |
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| 3UTR CAA 72 bp | CGCGCGTTTCCGGCTCCTGCTCAGAAGCTGTCCACCTaGATTCTGCCCGTAGCAGGTGAACCTGGTGTGGTG | + |
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Preference number: 4 (lower is better) Translates to: RAFPAPAQKLST*ILPVAGEPGVV Trigger: CACCACACCAGGTTCACCTGCTACGGGCAGAATCAAGGTGGACAGCTTCTGAGCAGGAGCCGGAAACGCGCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000274766.2 |
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| CDS-3UTR TCA 90 bp | CTGTCCACCTTGATTCTGCCCGTAGCAGGTGAACCTGGTGTGGTGCGCGCACTGCCGCGTCGTCATCCATaGGAAGAAGGTGTCCAGCTT | + |
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Preference number: 4 (lower is better) Translates to: LSTLILPVAGEPGVVRALPRRHP*EEGVQL Trigger: AAGCTGGACACCTTCTTCTCATGGATGACGACGCGG...CAGTGCGCGCACCACACCAGGTTCACCTGCTACGGGCAGAATCAAGGTGGACAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000274766.2 |
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| CDS-3UTR GCA 90 bp | CTCACTAGGCGTGCCTGTTTGAAGGCCCCGCGCGTTTCCGGCTCCTGCTCAGAACCTGCTCCCACCCCCTaGATGTTTATGCTGTTAGCA | + |
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Preference number: 4 (lower is better) Translates to: LTRRACLKAPRVSGSCSEPAPTP*MFMLLA Trigger: TGCTAACAGCATAAACATGCAGGGGGTGGGAGCAGG...TTCTGAGCAGGAGCCGGAAACGCGCGGGGCCTTCAAACAGGCACGCCTAGTGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000274766.2 |
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| CDS-3UTR TCA 90 bp | TGTGTGTGCGTCCTCCTCTCTCCTGCCCTCACTAGGCGTGCCTGTTTGAAGGCCGTGGTTGAGGGGCTGTaGCTTCTCGGTGTGATTGAT | + |
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Preference number: 4 (lower is better) Translates to: CVCVLLSPALTRRACLKAVVEGL*LLGVID Trigger: ATCAATCACACCGAGAAGTCACAGCCCCTCAACCAC...GGCCTTCAAACAGGCACGCCTAGTGAGGGCAGGAGAGAGGAGGACGCACACACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000274766.2 |
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| CDS-3UTR TCA 90 bp | GCGTTTCCGGCTCCTGCTCAGAAGCTGTCCACCTTGATTCTGCCCGTAGCAGGTTTCAAGAAACTCAAGTaGGTCGGTCTCCCCCACCGC | + |
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Preference number: 4 (lower is better) Translates to: AFPAPAQKLSTLILPVAGFKKLK*VGLPHR Trigger: GCGGTGGGGGAGACCGACTCACTTGAGTTTCTTGAA...ACCTGCTACGGGCAGAATCAAGGTGGACAGCTTCTGAGCAGGAGCCGGAAACGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000274766.2 |
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| CDS-3UTR TCA 90 bp | CGGGTCCTGATTGGCTGTGCACGCCACGGTGAAAAACTTGAGCGTCTACTCCGATGTCTCAGCCCGTCGTaGAGAGCGTGCTTGTGTACC | + |
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Preference number: 4 (lower is better) Translates to: RVLIGCARHGEKLERLLRCLSPS*RACLCT Trigger: GGTACACAAGCACGCTCTTCACGACGGGCTGAGACA...TCGGAGTAGACGCTCAAGTTTTTCACCGTGGCGTGCACAGCCAATCAGGACCCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000274766.2 |
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| CDS-3UTR TCA 90 bp | TTGGGTTTCACCATATTTGTGTGTGTGTGTGTGTGTGCGTCCTCCTCTCTCCTGGCGCACTGCGGGTCCTaGTTGGCTGTGCACGCCACG | + |
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Preference number: 4 (lower is better) Translates to: LGFTIFVCVCVCASSSLLAHCGS*LAVHAT Trigger: CGTGGCGTGCACAGCCAATCAGGACCCGCAGTGCGC...CAGGAGAGAGGAGGACGCACACACACACACACACACAAATATGGTGAAACCCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000274766.2 |
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| CDS-3UTR TCA 90 bp | GCCTGTTTGAAGGCCCCGCGCGTTTCCGGCTCCTGCTCAGAAGCTGTCCACCTTTGTGACTTCTCGGTGTaGTTGATGCCCCTCAAAACT | + |
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Preference number: 4 (lower is better) Translates to: ACLKAPRVSGSCSEAVHLCDFSV*LMPLKT Trigger: AGTTTTGAGGGGCATCAATCACACCGAGAAGTCACA...AAGGTGGACAGCTTCTGAGCAGGAGCCGGAAACGCGCGGGGCCTTCAAACAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000274766.2 |
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| CDS-3UTR CCA 90 bp | GGCTGTGCACGCCACGGTGAAAAACTTGAGCGTCTACTCCGAGTCCTGCAAGCTGGGCAATTACGTGGCTaGAGGCCAGGAAGCCTTCAA | + |
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Preference number: 4 (lower is better) Translates to: GCARHGEKLERLLRVLQAGQLRG*RPGSLQ Trigger: TTGAAGGCTTCCTGGCCTCCAGCCACGTAATTGCCC...AGCTTGCAGGACTCGGAGTAGACGCTCAAGTTTTTCACCGTGGCGTGCACAGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000274766.2 |
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| CDS-3UTR CCA 90 bp | TTGGGTTTCACCATATTTGTGTGTGTGTGTGTGTGTGCGTCCTCCTCTCTCCTGAGTGTCTCCTCTGGGTaGACGCCTAGGCGCACGGCC | + |
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Preference number: 4 (lower is better) Translates to: LGFTIFVCVCVCASSSLLSVSSG*TPRRTA Trigger: GGCCGTGCGCCTAGGCGTCCACCCAGAGGAGACACT...CAGGAGAGAGGAGGACGCACACACACACACACACACAAATATGGTGAAACCCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000274766.2 |
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| CDS-3UTR TCA 90 bp | TGGGTTTCACCATATTTGTGTGTGTGTGTGTGTGTGCGTCCTCCTCTCTCCTGCCCACACCTCAGTGGTTaGGGGGCTGTGACTTCTCGG | + |
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Preference number: 4 (lower is better) Translates to: WVSPYLCVCVCVRPPLSCPHLSG*GAVTSR Trigger: CCGAGAAGTCACAGCCCCTCAACCACTGAGGTGTGG...GCAGGAGAGAGGAGGACGCACACACACACACACACACAAATATGGTGAAACCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000274766.2 |
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| CDS-3UTR GCA 90 bp | ATTGGCTGTGCACGCCACGGTGAAAAACTTGAGCGTCTACTCCGAGTCCTGCAAGTGTGTGTGTGTGTGTaGGTCCTCCTCTCTCCTGCC | + |
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Preference number: 4 (lower is better) Translates to: IGCARHGEKLERLLRVLQVCVCV*VLLSPA Trigger: GGCAGGAGAGAGGAGGACGCACACACACACACACAC...TTGCAGGACTCGGAGTAGACGCTCAAGTTTTTCACCGTGGCGTGCACAGCCAAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000274766.2 |
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| CDS-3UTR CCA 90 bp | GTCCTGATTGGCTGTGCACGCCACGGTGAAAAACTTGAGCGTCTACTCCGAGTCCGTTCAGGCACCCTTTaGGGCCGTCAGGAACATCTA | + |
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Preference number: 4 (lower is better) Translates to: VLIGCARHGEKLERLLRVRSGTL*GRQEHL Trigger: TAGATGTTCCTGACGGCCCCAAAGGGTGCCTGAACG...GACTCGGAGTAGACGCTCAAGTTTTTCACCGTGGCGTGCACAGCCAATCAGGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000274766.2 |
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| CDS-3UTR TCA 90 bp | GCTCCTGCTCAGAAGCTGTCCACCTTGATTCTGCCCGTAGCAGGTGAACCTGGTACTTCTCGGTGTGATTaGTGCCCCTCAAAACTCTCG | + |
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Preference number: 4 (lower is better) Translates to: APAQKLSTLILPVAGEPGTSRCD*CPSKLS Trigger: CGAGAGTTTTGAGGGGCATCAATCACACCGAGAAGT...ACCAGGTTCACCTGCTACGGGCAGAATCAAGGTGGACAGCTTCTGAGCAGGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000274766.2 |
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| CDS-3UTR TCA 90 bp | CGGGTCCTGATTGGCTGTGCACGCCACGGTGAAAAACTTGAGCGTCTACTCCGAGAGCAAGCAGGAGATTaGGGGGTAAAGGTGCAAGAA | + |
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Preference number: 4 (lower is better) Translates to: RVLIGCARHGEKLERLLREQAGD*GVKVQE Trigger: TTCTTGCACCTTTACCCCTCAATCTCCTGCTTGCTC...TCGGAGTAGACGCTCAAGTTTTTCACCGTGGCGTGCACAGCCAATCAGGACCCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000274766.2 |
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| CDS-3UTR GCA 90 bp | CTGTCCACCTTGATTCTGCCCGTAGCAGGTGAACCTGGTGTGGTGCGCGCACTGACCAGAGGAGAAAATTaGTCTGCATTTCCCGTACTG | + |
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Preference number: 4 (lower is better) Translates to: LSTLILPVAGEPGVVRALTRGEN*SAFPVL Trigger: CAGTACGGGAAATGCAGAGCAATTTTCTCCTCTGGT...CAGTGCGCGCACCACACCAGGTTCACCTGCTACGGGCAGAATCAAGGTGGACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000274766.2 |
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| CDS-3UTR CCA 90 bp | GCACTGCGGGTCCTGATTGGCTGTGCACGCCACGGTGAAAAACTTGAGCGTCTAAACTCTCGTTGCAGTTaGGGGGTAGAGGTTGACACT | + |
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Preference number: 4 (lower is better) Translates to: ALRVLIGCARHGEKLERLNSRCS*GVEVDT Trigger: AGTGTCAACCTCTACCCCCCAACTGCAACGAGAGTT...TAGACGCTCAAGTTTTTCACCGTGGCGTGCACAGCCAATCAGGACCCGCAGTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000274766.2 |
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| CDS-3UTR TCA 90 bp | TTGGGTTTCACCATATTTGTGTGTGTGTGTGTGTGTGCGTCCTCCTCTCTCCTGCAACACTCACTTTTGTaGCCCTGCTCCCACCCCCTG | + |
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Preference number: 4 (lower is better) Translates to: LGFTIFVCVCVCASSSLLQHSLL*PCSHPL Trigger: CAGGGGGTGGGAGCAGGGTCACAAAAGTGAGTGTTG...CAGGAGAGAGGAGGACGCACACACACACACACACACAAATATGGTGAAACCCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000274766.2 |
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| CDS-3UTR CCA 90 bp | CCGCGCGTTTCCGGCTCCTGCTCAGAAGCTGTCCACCTTGATTCTGCCCGTAGCATCACTTCCAAGTGTTaGACACTATATTGTCACCAG | + |
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Preference number: 4 (lower is better) Translates to: PRVSGSCSEAVHLDSARSITSKC*TLYCHQ Trigger: CTGGTGACAATATAGTGTCCAACACTTGGAAGTGAT...GCTACGGGCAGAATCAAGGTGGACAGCTTCTGAGCAGGAGCCGGAAACGCGCGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000274766.2 |
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| CDS-3UTR CCA 90 bp | TGTGTGTGCGTCCTCCTCTCTCCTGCCCTCACTAGGCGTGCCTGTTTGAAGGCCCTTCTCTTTCACCTGTaGATTCGTCAGTTTCTCGTT | + |
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Preference number: 4 (lower is better) Translates to: CVCVLLSPALTRRACLKALLFHL*IRQFLV Trigger: AACGAGAAACTGACGAATCCACAGGTGAAAGAGAAG...GGCCTTCAAACAGGCACGCCTAGTGAGGGCAGGAGAGAGGAGGACGCACACACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000274766.2 |
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| CDS-3UTR TCA 90 bp | CGGGTCCTGATTGGCTGTGCACGCCACGGTGAAAAACTTGAGCGTCTACTCCGAAGTGTGGGGTTGATATaGAGAAATGCAGATCCCTAC | + |
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Preference number: 4 (lower is better) Translates to: RVLIGCARHGEKLERLLRSVGLI*RNADPY Trigger: GTAGGGATCTGCATTTCTTCATATCAACCCCACACT...TCGGAGTAGACGCTCAAGTTTTTCACCGTGGCGTGCACAGCCAATCAGGACCCG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000274766.2 |
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| CDS-3UTR TCA 90 bp | GCTCCTGCTCAGAAGCTGTCCACCTTGATTCTGCCCGTAGCAGGTGAACCTGGTCCTATAGTGTGGGGTTaGTATGAAGAAATGCAGATC | + |
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Preference number: 4 (lower is better) Translates to: APAQKLSTLILPVAGEPGPIVWG*YEEMQI Trigger: GATCTGCATTTCTTCATATCAACCCCACACTATAGG...ACCAGGTTCACCTGCTACGGGCAGAATCAAGGTGGACAGCTTCTGAGCAGGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000274766.2 |
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| CDS-3UTR TCA 90 bp | GCACTGCGGGTCCTGATTGGCTGTGCACGCCACGGTGAAAAACTTGAGCGTCTAAGGGTAGCACAGATATaGTGTAAGAAATTGGGTTTC | + |
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Preference number: 4 (lower is better) Translates to: ALRVLIGCARHGEKLERLRVAQI*CKKLGF Trigger: GAAACCCAATTTCTTACATCATATCTGTGCTACCCT...TAGACGCTCAAGTTTTTCACCGTGGCGTGCACAGCCAATCAGGACCCGCAGTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000274766.2 |
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| CDS-3UTR CCA 90 bp | TTTCACCATATTTGTGTGTGTGTGTGTGTGTGCGTCCTCCTCTCTCCTGCCCTCAGAAGGAATTTCACTTaGGTCAGCAGTAGGAGTAAA | + |
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Preference number: 4 (lower is better) Translates to: FHHICVCVCVCVLLSPALRRNFT*VSSRSK Trigger: TTTACTCCTACTGCTGACCCAAGTGAAATTCCTTCT...GAGGGCAGGAGAGAGGAGGACGCACACACACACACACACACAAATATGGTGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000274766.2 |
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| CDS GCA 90 bp | CGATCCCGCGCCCTGGGTGCGGTGAGGCCGCTGGGACAGCGGAGGTaGCTCCCGACGCGAAGCAGCGAGCTGAGGCGGCGGCCAGCGGGG | + |
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Preference number: 5 (lower is better) Translates to: RSRALGAVRPLGQRR*LPTRSSELRRRPAG Trigger: CCCCGCTGGCCGCCGCCTCAGCTCGCTGCTTCGCGTCGGGAGGCACCTCCGCTGTCCCAGCGGCCTCACCGCACCCAGGGCGCGGGATCG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000274766.2 |
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| CDS TCA 90 bp | AGTTTCTCGTTCGTTTCAGGAGGCGATCCCGCGCCCTGGGTGCGGTaGGGCCGCTGGGACAGCGGAGGTGCCTCCCGACGCGAAGCAGCG | + |
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Preference number: 5 (lower is better) Translates to: SFSFVSGGDPAPWVR*GRWDSGGASRREAA Trigger: CGCTGCTTCGCGTCGGGAGGCACCTCCGCTGTCCCAGCGGCCTCACCGCACCCAGGGCGCGGGATCGCCTCCTGAAACGAACGAGAAACT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000274766.2 |
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| CDS GCA 90 bp | TCGTCAGTTTCTCGTTCGTTTCAGGAGGCGATCCCGCGCCCTGGGTaGGGTGAGGCCGCTGGGACAGCGGAGGTGCCTCCCGACGCGAAG | + |
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Preference number: 5 (lower is better) Translates to: SSVSRSFQEAIPRPG*GEAAGTAEVPPDAK Trigger: CTTCGCGTCGGGAGGCACCTCCGCTGTCCCAGCGGCCTCACCGCACCCAGGGCGCGGGATCGCCTCCTGAAACGAACGAGAAACTGACGA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000274766.2 |
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| CDS CCA 90 bp | CGAAGTCTTCCTGAAGGAGGTGACCGGCGGCGTTCAGGCACCCTTTaGGGCCGTCAGGAACATCTACACCCCGCGGACTGGCCACCGAAT | + |
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Preference number: 5 (lower is better) Translates to: RSLPEGGDRRRSGTL*GRQEHLHPADWPPN Trigger: ATTCGGTGGCCAGTCCGCGGGGTGTAGATGTTCCTGACGGCCCCAAAGGGTGCCTGAACGCCGCCGGTCACCTCCTTCAGGAAGACTTCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000274766.2 |
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| CDS-3UTR CAA 90 bp | CTCACTAGGCGTGCCTGTTTGAAGGCCCCGCGCGTTTCCGGCTCCTGCTCAGAAACTAGGCGTGCCTGTTaGAAGGCCCCGCGCGTTTCC | + |
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Preference number: 5 (lower is better) Translates to: LTRRACLKAPRVSGSCSETRRAC*KAPRVS Trigger: GGAAACGCGCGGGGCCTTCAAACAGGCACGCCTAGT...TTCTGAGCAGGAGCCGGAAACGCGCGGGGCCTTCAAACAGGCACGCCTAGTGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000274766.2 |
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| CDS CCA 90 bp | CTGGGTGGACGCCTAGGCGCACGGCCGTTACTTCTCTTTCACCTGTaGATTCGTCAGTTTCTCGTTCGTTTCAGGAGGCGATCCCGCGCC | + |
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Preference number: 5 (lower is better) Translates to: LGGRLGARPLLLFHL*IRQFLVRFRRRSRA Trigger: GGCGCGGGATCGCCTCCTGAAACGAACGAGAAACTGACGAATCCACAGGTGAAAGAGAAGTAACGGCCGTGCGCCTAGGCGTCCACCCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000274766.2 |
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| CDS-3UTR CAA 90 bp | CCGCGCGTTTCCGGCTCCTGCTCAGAAGCTGTCCACCTTGATTCTGCCCGTAGCCAGAAGCTGTCCACCTaGATTCTGCCCGTAGCAGGT | + |
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Preference number: 5 (lower is better) Translates to: PRVSGSCSEAVHLDSARSQKLST*ILPVAG Trigger: ACCTGCTACGGGCAGAATCAAGGTGGACAGCTTCTG...GCTACGGGCAGAATCAAGGTGGACAGCTTCTGAGCAGGAGCCGGAAACGCGCGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000274766.2 |
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| CDS CCA 90 bp | GAGCGTCTACTCCGAGTCCTGCAAGCTCCTAGTGTCTCCTCTGGGTaGACGCCTAGGCGCACGGCCGTTACTTCTCTTTCACCTGTGGAT | + |
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Preference number: 5 (lower is better) Translates to: ERLLRVLQAPSVSSG*TPRRTAVTSLSPVD Trigger: ATCCACAGGTGAAAGAGAAGTAACGGCCGTGCGCCTAGGCGTCCACCCAGAGGAGACACTAGGAGCTTGCAGGACTCGGAGTAGACGCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000274766.2 |
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| CDS-3UTR CAA 90 bp | GTCCTGATTGGCTGTGCACGCCACGGTGAAAAACTTGAGCGTCTACTCCGAGTCGCGTTCAGGCACCCTTaGGGGCCGTCAGGAACATCT | + |
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Preference number: 5 (lower is better) Translates to: VLIGCARHGEKLERLLRVAFRHP*GPSGTS Trigger: AGATGTTCCTGACGGCCCCAAAGGGTGCCTGAACGC...GACTCGGAGTAGACGCTCAAGTTTTTCACCGTGGCGTGCACAGCCAATCAGGAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000274766.2 |
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| CDS CCA 90 bp | AATCCGGAAGCTAGACCAGATCCAGAGCGGGGGCAATTACGTGGCTaGAGGCCAGGAAGCCTTCAAGAAACTCAAGTGAGTCGGTCTCCC | + |
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Preference number: 5 (lower is better) Translates to: NPEARPDPERGQLRG*RPGSLQETQVSRSP Trigger: GGGAGACCGACTCACTTGAGTTTCTTGAAGGCTTCCTGGCCTCCAGCCACGTAATTGCCCCCGCTCTGGATCTGGTCTAGCTTCCGGATT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000274766.2 |
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| CDS-3UTR CAA 90 bp | TTTCACCATATTTGTGTGTGTGTGTGTGTGTGCGTCCTCCTCTCTCCTGCCCTCCCCACACCTCAGTGGTaGAGGGGCTGTGACTTCTCG | + |
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Preference number: 5 (lower is better) Translates to: FHHICVCVCVCVLLSPALPTPQW*RGCDFS Trigger: CGAGAAGTCACAGCCCCTCAACCACTGAGGTGTGGG...GAGGGCAGGAGAGAGGAGGACGCACACACACACACACACACAAATATGGTGAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000274766.2 |
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| CDS-3UTR CAA 90 bp | CCGCGCGTTTCCGGCTCCTGCTCAGAAGCTGTCCACCTTGATTCTGCCCGTAGCGTGTTGGACACTATATaGTCACCAGAGGAGAAAATT | + |
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Preference number: 5 (lower is better) Translates to: PRVSGSCSEAVHLDSARSVLDTI*SPEEKI Trigger: AATTTTCTCCTCTGGTGACAATATAGTGTCCAACAC...GCTACGGGCAGAATCAAGGTGGACAGCTTCTGAGCAGGAGCCGGAAACGCGCGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000274766.2 |
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| CDS-3UTR CAA 90 bp | TTTCACCATATTTGTGTGTGTGTGTGTGTGTGCGTCCTCCTCTCTCCTGCCCTCGCCACGGTGAAAAACTaGAGCGTCTACTCCGAGTCC | + |
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Preference number: 5 (lower is better) Translates to: FHHICVCVCVCVLLSPALATVKN*SVYSES Trigger: GGACTCGGAGTAGACGCTCAAGTTTTTCACCGTGGC...GAGGGCAGGAGAGAGGAGGACGCACACACACACACACACACAAATATGGTGAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000274766.2 |
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| CDS-3UTR CAA 90 bp | CTCACTAGGCGTGCCTGTTTGAAGGCCCCGCGCGTTTCCGGCTCCTGCTCAGAAGAAAAATTAGGCTGTTaGGAAAGGGTAGCACAGATA | + |
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Preference number: 5 (lower is better) Translates to: LTRRACLKAPRVSGSCSEEKLGC*ERVAQI Trigger: TATCTGTGCTACCCTTTCCAAACAGCCTAATTTTTC...TTCTGAGCAGGAGCCGGAAACGCGCGGGGCCTTCAAACAGGCACGCCTAGTGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000274766.2 |
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| CDS-3UTR CAA 90 bp | ATTGGCTGTGCACGCCACGGTGAAAAACTTGAGCGTCTACTCCGAGTCCTGCAAGGAGCAAGCAGGAGATaGAGGGGTAAAGGTGCAAGA | + |
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Preference number: 5 (lower is better) Translates to: IGCARHGEKLERLLRVLQGASRR*RGKGAR Trigger: TCTTGCACCTTTACCCCTCAATCTCCTGCTTGCTCC...TTGCAGGACTCGGAGTAGACGCTCAAGTTTTTCACCGTGGCGTGCACAGCCAAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000274766.2 |
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| CDS-3UTR CAA 90 bp | CCGCGCGTTTCCGGCTCCTGCTCAGAAGCTGTCCACCTTGATTCTGCCCGTAGCTCATTCCAAGTAGAATaGACAACACTCACTTTTGTG | + |
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Preference number: 5 (lower is better) Translates to: PRVSGSCSEAVHLDSARSSFQVE*TTLTFV Trigger: CACAAAAGTGAGTGTTGTCAATTCTACTTGGAATGA...GCTACGGGCAGAATCAAGGTGGACAGCTTCTGAGCAGGAGCCGGAAACGCGCGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000274766.2 |
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| CDS-3UTR CAA 90 bp | TGTGTGTGCGTCCTCCTCTCTCCTGCCCTCACTAGGCGTGCCTGTTTGAAGGCCAATCACTTCCAAGTGTaGGACACTATATTGTCACCA | + |
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Preference number: 5 (lower is better) Translates to: CVCVLLSPALTRRACLKANHFQV*DTILSP Trigger: TGGTGACAATATAGTGTCCAACACTTGGAAGTGATT...GGCCTTCAAACAGGCACGCCTAGTGAGGGCAGGAGAGAGGAGGACGCACACACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000274766.2 |
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| CDS-3UTR CAA 90 bp | TGTGTGTGCGTCCTCCTCTCTCCTGCCCTCACTAGGCGTGCCTGTTTGAAGGCCCTTAATTGCTTTAATTaGGGAGCAAGCAGGAGATTG | + |
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Preference number: 5 (lower is better) Translates to: CVCVLLSPALTRRACLKALNCFN*GASRRL Trigger: CAATCTCCTGCTTGCTCCCAAATTAAAGCAATTAAG...GGCCTTCAAACAGGCACGCCTAGTGAGGGCAGGAGAGAGGAGGACGCACACACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000274766.2 |
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| CDS GCA 72 bp | GCCCTGGGTGCGGTGAGGCCGCTGGGACAGCGGAGGTaGCTCCCGACGCGAAGCAGCGAGCTGAGGCGGCGG | + |
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Preference number: 6 (lower is better) Translates to: ALGAVRPLGQRR*LPTRSSELRRR Trigger: CCGCCGCCTCAGCTCGCTGCTTCGCGTCGGGAGGCACCTCCGCTGTCCCAGCGGCCTCACCGCACCCAGGGC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000274766.2 |
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| CDS GCA 72 bp | TCTCGTTCGTTTCAGGAGGCGATCCCGCGCCCTGGGTaGGGTGAGGCCGCTGGGACAGCGGAGGTGCCTCCC | + |
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Preference number: 6 (lower is better) Translates to: SRSFQEAIPRPG*GEAAGTAEVPP Trigger: GGGAGGCACCTCCGCTGTCCCAGCGGCCTCACCGCACCCAGGGCGCGGGATCGCCTCCTGAAACGAACGAGA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000274766.2 |
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| CDS CCA 72 bp | CCTGAAGGAGGTGACCGGCGGCGTTCAGGCACCCTTTaGGGCCGTCAGGAACATCTACACCCCGCGGACTGG | + |
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Preference number: 6 (lower is better) Translates to: PEGGDRRRSGTL*GRQEHLHPADW Trigger: CCAGTCCGCGGGGTGTAGATGTTCCTGACGGCCCCAAAGGGTGCCTGAACGCCGCCGGTCACCTCCTTCAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000274766.2 |
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| CDS CCA 72 bp | CTTTGGGGCCGTCAGGAACATCTACACCCCGCGGACTaGCCACCGAATCCGGAAGCTAGACCAGATCCAGAG | + |
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Preference number: 6 (lower is better) Translates to: LWGRQEHLHPAD*PPNPEARPDPE Trigger: CTCTGGATCTGGTCTAGCTTCCGGATTCGGTGGCCAGTCCGCGGGGTGTAGATGTTCCTGACGGCCCCAAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000274766.2 |
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| CDS TCA 72 bp | GGACCCCTTCTACGCGGGGCGCCGCGTCGTCATCCATaGGAAGAAGGTGTCCAGCTTCGAAGTCTTCCTGAA | + |
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Preference number: 6 (lower is better) Translates to: GPLLRGAPRRHP*EEGVQLRSLPE Trigger: TTCAGGAAGACTTCGAAGCTGGACACCTTCTTCTCATGGATGACGACGCGGCGCCCCGCGTAGAAGGGGTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000274766.2 |
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| CDS CCA 72 bp | CTCCGAGTCCTGCAAGCTCCTAGTGTCTCCTCTGGGTaGACGCCTAGGCGCACGGCCGTTACTTCTCTTTCA | + |
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Preference number: 6 (lower is better) Translates to: LRVLQAPSVSSG*TPRRTAVTSLS Trigger: TGAAAGAGAAGTAACGGCCGTGCGCCTAGGCGTCCACCCAGAGGAGACACTAGGAGCTTGCAGGACTCGGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000274766.2 |
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| CDS CCA 72 bp | GCTAGACCAGATCCAGAGCGGGGGCAATTACGTGGCTaGAGGCCAGGAAGCCTTCAAGAAACTCAAGTGAGT | + |
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Preference number: 6 (lower is better) Translates to: ARPDPERGQLRG*RPGSLQETQVS Trigger: ACTCACTTGAGTTTCTTGAAGGCTTCCTGGCCTCCAGCCACGTAATTGCCCCCGCTCTGGATCTGGTCTAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000274766.2 |
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| CDS CCA 72 bp | CGCCTAGGCGCACGGCCGTTACTTCTCTTTCACCTGTaGATTCGTCAGTTTCTCGTTCGTTTCAGGAGGCGA | + |
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Preference number: 6 (lower is better) Translates to: RLGARPLLLFHL*IRQFLVRFRRR Trigger: TCGCCTCCTGAAACGAACGAGAAACTGACGAATCCACAGGTGAAAGAGAAGTAACGGCCGTGCGCCTAGGCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000274766.2 |
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