RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for JUP (Homo sapiens)

Ensembl gene IDs: ENSG00000173801

Ensembl transcript IDs: ENST00000310706.9, ENST00000393930.5, ENST00000393931.8, ENST00000420370.5, ENST00000424457.5, ENST00000437187.5, ENST00000437369.5, ENST00000449889.5, ENST00000465293.1, ENST00000585793.1, ENST00000589036.1, ENST00000591690.5

Found 643 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCTGGAGGCCCTGGGGGCTTAGGGCAGTTGGTCGGTGGAGTTCAGTaGGAAAATCAGACCCAGAGAAGGAACCAAAGCCCTTCCGGGCCC +
Preference number: 1 (lower is better)
Translates to: PGGPGGLGQLVGGVQ*ENQTQRRNQSPSGP
Trigger: GGGCCCGGAAGGGCTTTGGTTCCTTCTCTGGGTCTGATTTTCTCACTGAACTCCACCGACCAACTGCCCTAAGCCCCCAGGGCCTCCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
3UTR CCA 90 bp GCAGGAGCAGAACACTATCCCAAGAAAGACCCTACGGAGGACCTCTaGAGGCGCAGGGTGCAGCAGGAAGTTACACCCCGGCTTCCCCAG +
Preference number: 1 (lower is better)
Translates to: AGAEHYPKKDPTEDL*RRRVQQEVTPRLPQ
Trigger: CTGGGGAAGCCGGGGTGTAACTTCCTGCTGCACCCTGCGCCTCCAGAGGTCCTCCGTAGGGTCTTTCTTGGGATAGTGTTCTGCTCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
3UTR CCA 90 bp GAACCTGGGCCCTGGAGGCCCTGGGGGCTTAGGGCAGTTGGTCGGTaGAGTTCAGTGAGAAAATCAGACCCAGAGAAGGAACCAAAGCCC +
Preference number: 1 (lower is better)
Translates to: EPGPWRPWGLRAVGR*SSVRKSDPEKEPKP
Trigger: GGGCTTTGGTTCCTTCTCTGGGTCTGATTTTCTCACTGAACTCCACCGACCAACTGCCCTAAGCCCCCAGGGCCTCCAGGGCCCAGGTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
3UTR GCA 90 bp ACTATCCCAAGAAAGACCCTACGGAGGACCTCTGGAGGCGCAGGGTaGAGCAGGAAGTTACACCCCGGCTTCCCCAGCTCAGGCACTTTT +
Preference number: 1 (lower is better)
Translates to: TIPRKTLRRTSGGAG*SRKLHPGFPSSGTF
Trigger: AAAAGTGCCTGAGCTGGGGAAGCCGGGGTGTAACTTCCTGCTGCACCCTGCGCCTCCAGAGGTCCTCCGTAGGGTCTTTCTTGGGATAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
3UTR-3UTR CCA 90 bp AAGAGAAAGCCCCTCACCACACACCAGAGGGGTCAGCCAAGAGCACTTCTCGGGTTTGGGTCTCGAACCTaGGCCCTGGAGGCCCTGGGG +
Preference number: 2 (lower is better)
Translates to: KRKPLTTHQRGQPRALLGFGSRT*ALEALG
Trigger: CCCCAGGGCCTCCAGGGCCCAGGTTCGAGACCCAAA...CCCGAGAAGTGCTCTTGGCTGACCCCTCTGGTGTGTGGTGAGGGGCTTTCTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
3UTR-3UTR GCA 90 bp CCCACCAAAGACACAAGAAGAAGGCAGGCCAGGGCACACCGTGCTTGGGGAAGCTCTGGAGGCGCAGGGTaGAGCAGGAAGTTACACCCC +
Preference number: 2 (lower is better)
Translates to: PTKDTRRRQARAHRAWGSSGGAG*SRKLHP
Trigger: GGGGTGTAACTTCCTGCTGCACCCTGCGCCTCCAGA...GCTTCCCCAAGCACGGTGTGCCCTGGCCTGCCTTCTTCTTGTGTCTTTGGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393931.8
3UTR-3UTR CCA 90 bp CCCTGGGGGCTTAGGGCAGTTGGTCGGTGGAGTTCAGTGAGAAAATCAGACCCACCTACGGAGGACCTCTaGAGGCGCAGGGTGCAGCAG +
Preference number: 2 (lower is better)
Translates to: PWGLRAVGRWSSVRKSDPPTEDL*RRRVQQ
Trigger: CTGCTGCACCCTGCGCCTCCAGAGGTCCTCCGTAGG...TGGGTCTGATTTTCTCACTGAACTCCACCGACCAACTGCCCTAAGCCCCCAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
3UTR-3UTR GCA 90 bp CATCCCCACCAAAGACACAAGAAGAAGGCAGGCCAGGGCACACCGTGCTTGGGGTCTTGCCCCATCGCCTaGACGGAGAGCCTCTCAGAT +
Preference number: 2 (lower is better)
Translates to: HPHQRHKKKAGQGTPCLGSCPIA*TESLSD
Trigger: ATCTGAGAGGCTCTCCGTGCAGGCGATGGGGCAAGA...CCCCAAGCACGGTGTGCCCTGGCCTGCCTTCTTCTTGTGTCTTTGGTGGGGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393931.8
3UTR-3UTR GCA 90 bp GAATGGGTACTTGAGTCTGAAGCTTTAGTGGCCAGGGCCACAGGGGCGGGGAGGGGCACTTTTCTGTCTTaGCCCATCGCCTGCACGGAG +
Preference number: 2 (lower is better)
Translates to: EWVLESEALVARATGAGRGTFLS*PIACTE
Trigger: CTCCGTGCAGGCGATGGGGCAAGACAGAAAAGTGCC...CCTCCCCGCCCCTGTGGCCCTGGCCACTAAAGCTTCAGACTCAAGTACCCATTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
3UTR-3UTR CCA 90 bp TGGAGGCCCTGGGGGCTTAGGGCAGTTGGTCGGTGGAGTTCAGTGAGAAAATCAGCTAGGGCAGCTGTGTaGGTGGGACAGGGGTGTGAG +
Preference number: 2 (lower is better)
Translates to: WRPWGLRAVGRWSSVRKSARAAV*VGQGCE
Trigger: CTCACACCCCTGTCCCACCCACACAGCTGCCCTAGC...TGATTTTCTCACTGAACTCCACCGACCAACTGCCCTAAGCCCCCAGGGCCTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
3UTR-3UTR CCA 90 bp AAAACAGAATGGGTACTTGAGTCTGAAGCTTTAGTGGCCAGGGCCACAGGGGCGGGGAGGCTGGAGGTTTaGAGGGGCGTTGCTGGGGGA +
Preference number: 2 (lower is better)
Translates to: KTEWVLESEALVARATGAGRLEV*RGVAGG
Trigger: TCCCCCAGCAACGCCCCTCCAAACCTCCAGCCTCCC...CGCCCCTGTGGCCCTGGCCACTAAAGCTTCAGACTCAAGTACCCATTCTGTTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
3UTR-3UTR CCA 90 bp GAACACTATCCCAAGAAAGACCCTACGGAGGACCTCTGGAGGCGCAGGGTGCAGGTTTCAGCGGGGAGATaGGAGGGCCTCCAACAGAAG +
Preference number: 2 (lower is better)
Translates to: EHYPKKDPTEDLWRRRVQVSAGR*EGLQQK
Trigger: CTTCTGTTGGAGGCCCTCCCATCTCCCCGCTGAAAC...CTGCACCCTGCGCCTCCAGAGGTCCTCCGTAGGGTCTTTCTTGGGATAGTGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393931.8
3UTR-3UTR GCA 90 bp CCCTGGGGGCTTAGGGCAGTTGGTCGGTGGAGTTCAGTGAGAAAATCAGACCCATCTTGCCCCATCGCCTaGACGGAGAGCCTCTCAGAT +
Preference number: 2 (lower is better)
Translates to: PWGLRAVGRWSSVRKSDPSCPIA*TESLSD
Trigger: ATCTGAGAGGCTCTCCGTGCAGGCGATGGGGCAAGA...TGGGTCTGATTTTCTCACTGAACTCCACCGACCAACTGCCCTAAGCCCCCAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
3UTR-3UTR GCA 90 bp CCCTGGGGGCTTAGGGCAGTTGGTCGGTGGAGTTCAGTGAGAAAATCAGACCCAGGCACTTTTCTGTCTTaGCCCATCGCCTGCACGGAG +
Preference number: 2 (lower is better)
Translates to: PWGLRAVGRWSSVRKSDPGTFLS*PIACTE
Trigger: CTCCGTGCAGGCGATGGGGCAAGACAGAAAAGTGCC...TGGGTCTGATTTTCTCACTGAACTCCACCGACCAACTGCCCTAAGCCCCCAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
3UTR-3UTR GCA 90 bp CGTTGCTGGGGGAAAACAGAATGGGTACTTGAGTCTGAAGCTTTAGTGGCCAGGGGCCAGGGCACACCGTaGTTGGGGAAGCTCAGCAGC +
Preference number: 2 (lower is better)
Translates to: RCWGKTEWVLESEALVARGQGTP*LGKLSS
Trigger: GCTGCTGAGCTTCCCCAAGCACGGTGTGCCCTGGCC...CCTGGCCACTAAAGCTTCAGACTCAAGTACCCATTCTGTTTTCCCCCAGCAACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000393931.8
3UTR-3UTR CCA 90 bp CGTTGCTGGGGGAAAACAGAATGGGTACTTGAGTCTGAAGCTTTAGTGGCCAGGCCTACGGAGGACCTCTaGAGGCGCAGGGTGCAGCAG +
Preference number: 2 (lower is better)
Translates to: RCWGKTEWVLESEALVARPTEDL*RRRVQQ
Trigger: CTGCTGCACCCTGCGCCTCCAGAGGTCCTCCGTAGG...CCTGGCCACTAAAGCTTCAGACTCAAGTACCCATTCTGTTTTCCCCCAGCAACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
3UTR-3UTR CCA 90 bp AAGAGAAAGCCCCTCACCACACACCAGAGGGGTCAGCCAAGAGCACTTCTCGGGTGGATTTTGGGGGTTTaGGTCTCGAACCTGGGCCCT +
Preference number: 2 (lower is better)
Translates to: KRKPLTTHQRGQPRALLGWILGV*VSNLGP
Trigger: AGGGCCCAGGTTCGAGACCCAAACCCCCAAAATCCA...CCCGAGAAGTGCTCTTGGCTGACCCCTCTGGTGTGTGGTGAGGGGCTTTCTCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
3UTR-3UTR CCA 90 bp GAAAATCAGACCCAGAGAAGGAACCAAAGCCCTTCCGGGCCCAGGCAGCTGGAGCCTGGAGAGAGAAGCTaGCATCTTCTGGAGCAGGTG +
Preference number: 2 (lower is better)
Translates to: ENQTQRRNQSPSGPRQLEPGERS*HLLEQV
Trigger: CACCTGCTCCAGAAGATGCCAGCTTCTCTCTCCAGG...CTCCAGCTGCCTGGGCCCGGAAGGGCTTTGGTTCCTTCTCTGGGTCTGATTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
3UTR-3UTR GCA 90 bp AGTTCAGTGAGAAAATCAGACCCAGAGAAGGAACCAAAGCCCTTCCGGGCCCAGTCTTGCCCCATCGCCTaGACGGAGAGCCTCTCAGAT +
Preference number: 2 (lower is better)
Translates to: SSVRKSDPEKEPKPFRAQSCPIA*TESLSD
Trigger: ATCTGAGAGGCTCTCCGTGCAGGCGATGGGGCAAGA...CTGGGCCCGGAAGGGCTTTGGTTCCTTCTCTGGGTCTGATTTTCTCACTGAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
3UTR-3UTR TCA 90 bp TGGAGGCCCTGGGGGCTTAGGGCAGTTGGTCGGTGGAGTTCAGTGAGAAAATCAGTCGGTGGAGTTCAGTaGGAAAATCAGACCCAGAGA +
Preference number: 2 (lower is better)
Translates to: WRPWGLRAVGRWSSVRKSVGGVQ*ENQTQR
Trigger: TCTCTGGGTCTGATTTTCTCACTGAACTCCACCGAC...TGATTTTCTCACTGAACTCCACCGACCAACTGCCCTAAGCCCCCAGGGCCTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
3UTR-3UTR CCA 90 bp CTTCTGGAGCAGGTGACTCACTCCATATCTCCTCCCCATCTCCCCTGGACGGTCTGGGGGAAAACAGAATaGGTACTTGAGTCTGAAGCT +
Preference number: 2 (lower is better)
Translates to: LLEQVTHSISPPHLPWTVWGKTE*VLESEA
Trigger: AGCTTCAGACTCAAGTACCCATTCTGTTTTCCCCCA...GACCGTCCAGGGGAGATGGGGAGGAGATATGGAGTGAGTCACCTGCTCCAGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
3UTR-3UTR CCA 90 bp GAAAATCAGACCCAGAGAAGGAACCAAAGCCCTTCCGGGCCCAGGCAGCTGGAGTGGGGGAAAACAGAATaGGTACTTGAGTCTGAAGCT +
Preference number: 2 (lower is better)
Translates to: ENQTQRRNQSPSGPRQLEWGKTE*VLESEA
Trigger: AGCTTCAGACTCAAGTACCCATTCTGTTTTCCCCCA...CTCCAGCTGCCTGGGCCCGGAAGGGCTTTGGTTCCTTCTCTGGGTCTGATTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
3UTR-3UTR TCA 90 bp CGTTGCTGGGGGAAAACAGAATGGGTACTTGAGTCTGAAGCTTTAGTGGCCAGGCCCCTGGACGGTCCCTaGACTTTTCAAGAGAAGTTT +
Preference number: 2 (lower is better)
Translates to: RCWGKTEWVLESEALVARPLDGP*TFQEKF
Trigger: AAACTTCTCTTGAAAAGTTCAGGGACCGTCCAGGGG...CCTGGCCACTAAAGCTTCAGACTCAAGTACCCATTCTGTTTTCCCCCAGCAACG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
3UTR-3UTR CCA 90 bp AAAACAGAATGGGTACTTGAGTCTGAAGCTTTAGTGGCCAGGGCCACAGGGGCGAGGGCAGTTGGTCGGTaGAGTTCAGTGAGAAAATCA +
Preference number: 2 (lower is better)
Translates to: KTEWVLESEALVARATGARAVGR*SSVRKS
Trigger: TGATTTTCTCACTGAACTCCACCGACCAACTGCCCT...CGCCCCTGTGGCCCTGGCCACTAAAGCTTCAGACTCAAGTACCCATTCTGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
3UTR CCA 72 bp GGGGGTTTGGGTCTCGAACCTGGGCCCTGGAGGCCCTaGGGGCTTAGGGCAGTTGGTCGGTGGAGTTCAGTG +
Preference number: 3 (lower is better)
Translates to: GGLGLEPGPWRP*GLRAVGRWSSV
Trigger: CACTGAACTCCACCGACCAACTGCCCTAAGCCCCCAGGGCCTCCAGGGCCCAGGTTCGAGACCCAAACCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
3UTR GCA 72 bp AGAAAGACCCTACGGAGGACCTCTGGAGGCGCAGGGTaGAGCAGGAAGTTACACCCCGGCTTCCCCAGCTCA +
Preference number: 3 (lower is better)
Translates to: RKTLRRTSGGAG*SRKLHPGFPSS
Trigger: TGAGCTGGGGAAGCCGGGGTGTAACTTCCTGCTGCACCCTGCGCCTCCAGAGGTCCTCCGTAGGGTCTTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
3UTR GCA 72 bp CCCAGCTCAGGCACTTTTCTGTCTTGCCCCATCGCCTaGACGGAGAGCCTCTCAGATGAGGAACCGCACTGG +
Preference number: 3 (lower is better)
Translates to: PSSGTFLSCPIA*TESLSDEEPHW
Trigger: CCAGTGCGGTTCCTCATCTGAGAGGCTCTCCGTGCAGGCGATGGGGCAAGACAGAAAAGTGCCTGAGCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310706.9
ENST00000393930.5
3UTR GCA 72 bp CCCAGCTCAGGCACTTTTCTGTCTTGCCCCATCGCCTaGACGGAGAGCCTCTCAGATGAGGAACCGCACCTG +
Preference number: 3 (lower is better)
Translates to: PSSGTFLSCPIA*TESLSDEEPHL
Trigger: CAGGTGCGGTTCCTCATCTGAGAGGCTCTCCGTGCAGGCGATGGGGCAAGACAGAAAAGTGCCTGAGCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393931.8
3UTR CCA 72 bp GAACACTATCCCAAGAAAGACCCTACGGAGGACCTCTaGAGGCGCAGGGTGCAGCAGGAAGTTACACCCCGG +
Preference number: 3 (lower is better)
Translates to: EHYPKKDPTEDL*RRRVQQEVTPR
Trigger: CCGGGGTGTAACTTCCTGCTGCACCCTGCGCCTCCAGAGGTCCTCCGTAGGGTCTTTCTTGGGATAGTGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
3UTR-3UTR CAA 90 bp AAGAGAAAGCCCCTCACCACACACCAGAGGGGTCAGCCAAGAGCACTTCTCGGGAGGCACTTTTCTGTCTaGCCCCATCGCCTGCACGGA +
Preference number: 3 (lower is better)
Translates to: KRKPLTTHQRGQPRALLGRHFSV*PHRLHG
Trigger: TCCGTGCAGGCGATGGGGCAAGACAGAAAAGTGCCT...CCCGAGAAGTGCTCTTGGCTGACCCCTCTGGTGTGTGGTGAGGGGCTTTCTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
3UTR-3UTR CAA 90 bp CTTCTGGAGCAGGTGACTCACTCCATATCTCCTCCCCATCTCCCCTGGACGGTCTTGGATTTTGGGGGTTaGGGTCTCGAACCTGGGCCC +
Preference number: 3 (lower is better)
Translates to: LLEQVTHSISPPHLPWTVLDFGG*GLEPGP
Trigger: GGGCCCAGGTTCGAGACCCAAACCCCCAAAATCCAA...GACCGTCCAGGGGAGATGGGGAGGAGATATGGAGTGAGTCACCTGCTCCAGAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
3UTR-3UTR CAA 90 bp AGTGAGAAAATCAGACCCAGAGAAGGAACCAAAGCCCTTCCGGGCCCAGGCAGCAGGCACTTTTCTGTCTaGCCCCATCGCCTGCACGGA +
Preference number: 3 (lower is better)
Translates to: SEKIRPREGTKALPGPGSRHFSV*PHRLHG
Trigger: TCCGTGCAGGCGATGGGGCAAGACAGAAAAGTGCCT...GCTGCCTGGGCCCGGAAGGGCTTTGGTTCCTTCTCTGGGTCTGATTTTCTCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
3UTR CCA 72 bp CCCTGGAGGCCCTGGGGGCTTAGGGCAGTTGGTCGGTaGAGTTCAGTGAGAAAATCAGACCCAGAGAAGGAA +
Preference number: 3 (lower is better)
Translates to: PWRPWGLRAVGR*SSVRKSDPEKE
Trigger: TTCCTTCTCTGGGTCTGATTTTCTCACTGAACTCCACCGACCAACTGCCCTAAGCCCCCAGGGCCTCCAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
3UTR TCA 72 bp ACCCTGGAGAGAGAAGCTGGCATCTTCTGGAGCAGGTaGCTCACTCCATATCTCCTCCCCATCTCCCCTGGA +
Preference number: 3 (lower is better)
Translates to: TLEREAGIFWSR*LTPYLLPISPG
Trigger: TCCAGGGGAGATGGGGAGGAGATATGGAGTGAGTCACCTGCTCCAGAAGATGCCAGCTTCTCTCTCCAGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
3UTR-3UTR CAA 90 bp AAAACAGAATGGGTACTTGAGTCTGAAGCTTTAGTGGCCAGGGCCACAGGGGCGAGGCACTTTTCTGTCTaGCCCCATCGCCTGCACGGA +
Preference number: 3 (lower is better)
Translates to: KTEWVLESEALVARATGARHFSV*PHRLHG
Trigger: TCCGTGCAGGCGATGGGGCAAGACAGAAAAGTGCCT...CGCCCCTGTGGCCCTGGCCACTAAAGCTTCAGACTCAAGTACCCATTCTGTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
3UTR-3UTR CAA 90 bp AAAACAGAATGGGTACTTGAGTCTGAAGCTTTAGTGGCCAGGGCCACAGGGGCGTTGGATTTTGGGGGTTaGGGTCTCGAACCTGGGCCC +
Preference number: 3 (lower is better)
Translates to: KTEWVLESEALVARATGALDFGG*GLEPGP
Trigger: GGGCCCAGGTTCGAGACCCAAACCCCCAAAATCCAA...CGCCCCTGTGGCCCTGGCCACTAAAGCTTCAGACTCAAGTACCCATTCTGTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
3UTR CCA 72 bp TGGGCAAAGCCAACTAAGCACCCTGGAGAGAGAAGCTaGCATCTTCTGGAGCAGGTGACTCACTCCATATCT +
Preference number: 3 (lower is better)
Translates to: WAKPTKHPGERS*HLLEQVTHSIS
Trigger: AGATATGGAGTGAGTCACCTGCTCCAGAAGATGCCAGCTTCTCTCTCCAGGGTGCTTAGTTGGCTTTGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp CCATCGCCTGCACGGAGAGCCTCTCAGATGAGGAACCGCACTGGGGCCAGGCCGGCCGACTTGAGCAGCTaGGACGGCTCGGCCAGTCGC +
Preference number: 4 (lower is better)
Translates to: PSPARRASQMRNRTGARPADLSS*DGSASR
Trigger: GCGACTGGCCGAGCCGTCCCAGCTGCTCAAGTCGGC...CGGCCTGGCCCCAGTGCGGTTCCTCATCTGAGAGGCTCTCCGTGCAGGCGATGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310706.9
ENST00000393930.5
CDS-3UTR CCA 90 bp TCTGGAGGCGCAGGGTGCAGCAGGAAGTTACACCCCGGCTTCCCCAGCTCAGGCCGGGCAGGGCGCGAGTaGCCAGCTCGGCATCGTCCT +
Preference number: 4 (lower is better)
Translates to: SGGAGCSRKLHPGFPSSGRAGRE*PARHRP
Trigger: AGGACGATGCCGAGCTGGCCACTCGCGCCCTGCCCG...GCCTGAGCTGGGGAAGCCGGGGTGTAACTTCCTGCTGCACCCTGCGCCTCCAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp TCTGGAGGCGCAGGGTGCAGCAGGAAGTTACACCCCGGCTTCCCCAGCTCAGGCACAGCGGCCACCAGCTaGGGCGAGCCCATCAGGGCC +
Preference number: 4 (lower is better)
Translates to: SGGAGCSRKLHPGFPSSGTAATS*GEPIRA
Trigger: GGCCCTGATGGGCTCGCCCCAGCTGGTGGCCGCTGT...GCCTGAGCTGGGGAAGCCGGGGTGTAACTTCCTGCTGCACCCTGCGCCTCCAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR TCA 90 bp TCTGGAGGCGCAGGGTGCAGCAGGAAGTTACACCCCGGCTTCCCCAGCTCAGGCTGGGGTACGGGGGCCTaGGGCCGTCGCTGTAGGTGT +
Preference number: 4 (lower is better)
Translates to: SGGAGCSRKLHPGFPSSGWGTGA*GRRCRC
Trigger: ACACCTACAGCGACGGCCTCAGGCCCCCGTACCCCA...GCCTGAGCTGGGGAAGCCGGGGTGTAACTTCCTGCTGCACCCTGCGCCTCCAGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR GCA 90 bp TCTGGAGGCGCAGGGTGCAGCAGGAAGTTACACCCCGGCTTCCCCAGCTCAGGCGGGCTGCTGTGTGCCTaGAGCTACGTGGCGCTGGGC +
Preference number: 4 (lower is better)
Translates to: SGGAGCSRKLHPGFPSSGGLLCA*SYVALG
Trigger: GCCCAGCGCCACGTAGCTGCAGGCACACAGCAGCCC...GCCTGAGCTGGGGAAGCCGGGGTGTAACTTCCTGCTGCACCCTGCGCCTCCAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp CCATCGCCTGCACGGAGAGCCTCTCAGATGAGGAACCGCACTGGGGCCAGGCCGCAGCAACTCCATGAGTaGGGCCGAGGCCCCCTCTGC +
Preference number: 4 (lower is better)
Translates to: PSPARRASQMRNRTGARPQQLHE*GRGPLC
Trigger: GCAGAGGGGGCCTCGGCCCCACTCATGGAGTTGCTG...CGGCCTGGCCCCAGTGCGGTTCCTCATCTGAGAGGCTCTCCGTGCAGGCGATGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310706.9
ENST00000393930.5
CDS-3UTR GCA 90 bp CCATCGCCTGCACGGAGAGCCTCTCAGATGAGGAACCGCACTGGGGCCAGGCCGGCAGGATGCTGGTGGTaGAGCGGGCTGTGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: PSPARRASQMRNRTGARPAGCWW*SGLCPG
Trigger: ACCTGGACACAGCCCGCTGCACCACCAGCATCCTGC...CGGCCTGGCCCCAGTGCGGTTCCTCATCTGAGAGGCTCTCCGTGCAGGCGATGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310706.9
ENST00000393930.5
CDS-3UTR GCA 90 bp TCTGGAGGCGCAGGGTGCAGCAGGAAGTTACACCCCGGCTTCCCCAGCTCAGGCCCAGGCGGGGGCTGTTaGTGGTCAGGTGCTTGCCCA +
Preference number: 4 (lower is better)
Translates to: SGGAGCSRKLHPGFPSSGPGGGC*WSGACP
Trigger: TGGGCAAGCACCTGACCAGCAACAGCCCCCGCCTGG...GCCTGAGCTGGGGAAGCCGGGGTGTAACTTCCTGCTGCACCCTGCGCCTCCAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR GCA 90 bp TCTGGAGGCGCAGGGTGCAGCAGGAAGTTACACCCCGGCTTCCCCAGCTCAGGCGGCCAGCATGTGGTCTaGAGTGGGGTACGGGGGCCT +
Preference number: 4 (lower is better)
Translates to: SGGAGCSRKLHPGFPSSGGQHVV*SGVRGP
Trigger: AGGCCCCCGTACCCCACTGCAGACCACATGCTGGCC...GCCTGAGCTGGGGAAGCCGGGGTGTAACTTCCTGCTGCACCCTGCGCCTCCAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp TCTGGAGGCGCAGGGTGCAGCAGGAAGTTACACCCCGGCTTCCCCAGCTCAGGCGCCCCTCCACCTGGGTaGCCAGCAGAAGCGAGCTGT +
Preference number: 4 (lower is better)
Translates to: SGGAGCSRKLHPGFPSSGAPPPG*PAEASC
Trigger: ACAGCTCGCTTCTGCTGGCCACCCAGGTGGAGGGGC...GCCTGAGCTGGGGAAGCCGGGGTGTAACTTCCTGCTGCACCCTGCGCCTCCAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp TCTGGAGGCGCAGGGTGCAGCAGGAAGTTACACCCCGGCTTCCCCAGCTCAGGCGGCGCACGGCCATCTTaGCGCCCTCCTGGTACAGGA +
Preference number: 4 (lower is better)
Translates to: SGGAGCSRKLHPGFPSSGGARPS*RPPGTG
Trigger: TCCTGTACCAGGAGGGCGCCAAGATGGCCGTGCGCC...GCCTGAGCTGGGGAAGCCGGGGTGTAACTTCCTGCTGCACCCTGCGCCTCCAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp TCTGGAGGCGCAGGGTGCAGCAGGAAGTTACACCCCGGCTTCCCCAGCTCAGGCGCAGCTACGTGGCGCTaGGCATCCTGGTGGGCCTTC +
Preference number: 4 (lower is better)
Translates to: SGGAGCSRKLHPGFPSSGAATWR*ASWWAF
Trigger: GAAGGCCCACCAGGATGCCCAGCGCCACGTAGCTGC...GCCTGAGCTGGGGAAGCCGGGGTGTAACTTCCTGCTGCACCCTGCGCCTCCAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp TCTGGAGGCGCAGGGTGCAGCAGGAAGTTACACCCCGGCTTCCCCAGCTCAGGCCAGCAACTCCATGAGTaGGGCCGAGGCCCCCTCTGC +
Preference number: 4 (lower is better)
Translates to: SGGAGCSRKLHPGFPSSGQQLHE*GRGPLC
Trigger: GCAGAGGGGGCCTCGGCCCCACTCATGGAGTTGCTG...GCCTGAGCTGGGGAAGCCGGGGTGTAACTTCCTGCTGCACCCTGCGCCTCCAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp TCTGGAGGCGCAGGGTGCAGCAGGAAGTTACACCCCGGCTTCCCCAGCTCAGGCGGGAGGCTGGAGGTTTaGAGGGGCGTTGCTGGGGGA +
Preference number: 4 (lower is better)
Translates to: SGGAGCSRKLHPGFPSSGGRLEV*RGVAGG
Trigger: TCCCCCAGCAACGCCCCTCCAAACCTCCAGCCTCCC...GCCTGAGCTGGGGAAGCCGGGGTGTAACTTCCTGCTGCACCCTGCGCCTCCAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp TCTGGAGGCGCAGGGTGCAGCAGGAAGTTACACCCCGGCTTCCCCAGCTCAGGCTTTGGGTCTCGAACCTaGGCCCTGGAGGCCCTGGGG +
Preference number: 4 (lower is better)
Translates to: SGGAGCSRKLHPGFPSSGFGSRT*ALEALG
Trigger: CCCCAGGGCCTCCAGGGCCCAGGTTCGAGACCCAAA...GCCTGAGCTGGGGAAGCCGGGGTGTAACTTCCTGCTGCACCCTGCGCCTCCAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR TCA 90 bp GAAAATCAGACCCAGAGAAGGAACCAAAGCCCTTCCGGGCCCAGGCAGCTGGAGGGACGAGGCGGGGGATaGCCGCTGCCTCCTGCAGCG +
Preference number: 4 (lower is better)
Translates to: ENQTQRRNQSPSGPRQLEGRGGG*PLPPAA
Trigger: CGCTGCAGGAGGCAGCGGTCATCCCCCGCCTCGTCC...CTCCAGCTGCCTGGGCCCGGAAGGGCTTTGGTTCCTTCTCTGGGTCTGATTTTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR GCA 90 bp GAATGGGTACTTGAGTCTGAAGCTTTAGTGGCCAGGGCCACAGGGGCGGGGAGGGGCTCGGCCAGTCGCTaGAGGTTGGTGGCCTGCCCC +
Preference number: 4 (lower is better)
Translates to: EWVLESEALVARATGAGRGSASR*RLVACP
Trigger: GGGGCAGGCCACCAACCTGCAGCGACTGGCCGAGCC...CCTCCCCGCCCCTGTGGCCCTGGCCACTAAAGCTTCAGACTCAAGTACCCATTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR GCA 90 bp TCTGGAGGCGCAGGGTGCAGCAGGAAGTTACACCCCGGCTTCCCCAGCTCAGGCGCAGGATGCTGGTGGTaGAGCGGGCTGTGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: SGGAGCSRKLHPGFPSSGAGCWW*SGLCPG
Trigger: ACCTGGACACAGCCCGCTGCACCACCAGCATCCTGC...GCCTGAGCTGGGGAAGCCGGGGTGTAACTTCCTGCTGCACCCTGCGCCTCCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR GCA 90 bp CCATCGCCTGCACGGAGAGCCTCTCAGATGAGGAACCGCACTGGGGCCAGGCCGGCTTGCTCTCCTGGTTaGCGTAGGCCAGGAGCTGCA +
Preference number: 4 (lower is better)
Translates to: PSPARRASQMRNRTGARPACSPG*RRPGAA
Trigger: TGCAGCTCCTGGCCTACGGCAACCAGGAGAGCAAGC...CGGCCTGGCCCCAGTGCGGTTCCTCATCTGAGAGGCTCTCCGTGCAGGCGATGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310706.9
ENST00000393930.5
CDS-3UTR CCA 90 bp CCATCGCCTGCACGGAGAGCCTCTCAGATGAGGAACCGCACTGGGGCCAGGCCGGCACGCAGGATGGCATaGATGAGAGCCTCCACACCG +
Preference number: 4 (lower is better)
Translates to: PSPARRASQMRNRTGARPARRMA*MRASTP
Trigger: CGGTGTGGAGGCTCTCATCCATGCCATCCTGCGTGC...CGGCCTGGCCCCAGTGCGGTTCCTCATCTGAGAGGCTCTCCGTGCAGGCGATGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310706.9
ENST00000393930.5
CDS-3UTR CCA 90 bp CCATCGCCTGCACGGAGAGCCTCTCAGATGAGGAACCGCACTGGGGCCAGGCCGATGGGAATCATGCTCTaGGCAGCCTCCCAGGCAGCC +
Preference number: 4 (lower is better)
Translates to: PSPARRASQMRNRTGARPMGIML*AASQAA
Trigger: GGCTGCCTGGGAGGCTGCCCAGAGCATGATTCCCAT...CGGCCTGGCCCCAGTGCGGTTCCTCATCTGAGAGGCTCTCCGTGCAGGCGATGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310706.9
ENST00000393930.5
CDS-3UTR TCA 90 bp AGAACACTATCCCAAGAAAGACCCTACGGAGGACCTCTGGAGGCGCAGGGTGCAGCGCGGACAGCGAACTaGGCTCGGCGTGGTCGGGCG +
Preference number: 4 (lower is better)
Translates to: RTLSQERPYGGPLEAQGAARTAN*ARRGRA
Trigger: CGCCCGACCACGCCGAGCTCAGTTCGCTGTCCGCGC...TGCACCCTGCGCCTCCAGAGGTCCTCCGTAGGGTCTTTCTTGGGATAGTGTTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310706.9
ENST00000393931.8
CDS-3UTR TCA 90 bp CTTCTGGAGCAGGTGACTCACTCCATATCTCCTCCCCATCTCCCCTGGACGGTCACTGAGTATGGGGCCTaGCCGGGCCGGGTCGGGGTC +
Preference number: 4 (lower is better)
Translates to: LLEQVTHSISPPHLPWTVTEYGA*PGRVGV
Trigger: GACCCCGACCCGGCCCGGTCAGGCCCCATACTCAGT...GACCGTCCAGGGGAGATGGGGAGGAGATATGGAGTGAGTCACCTGCTCCAGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000310706.9
ENST00000393931.8
CDS-3UTR TCA 90 bp GAATGGGTACTTGAGTCTGAAGCTTTAGTGGCCAGGGCCACAGGGGCGGGGAGGTGGGGTACGGGGGCCTaGGGCCGTCGCTGTAGGTGT +
Preference number: 4 (lower is better)
Translates to: EWVLESEALVARATGAGRWGTGA*GRRCRC
Trigger: ACACCTACAGCGACGGCCTCAGGCCCCCGTACCCCA...CCTCCCCGCCCCTGTGGCCCTGGCCACTAAAGCTTCAGACTCAAGTACCCATTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR GCA 90 bp TCTGGAGGCGCAGGGTGCAGCAGGAAGTTACACCCCGGCTTCCCCAGCTCAGGCGCTTGCTCTCCTGGTTaGCGTAGGCCAGGAGCTGCA +
Preference number: 4 (lower is better)
Translates to: SGGAGCSRKLHPGFPSSGACSPG*RRPGAA
Trigger: TGCAGCTCCTGGCCTACGGCAACCAGGAGAGCAAGC...GCCTGAGCTGGGGAAGCCGGGGTGTAACTTCCTGCTGCACCCTGCGCCTCCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR GCA 90 bp GAACACTATCCCAAGAAAGACCCTACGGAGGACCTCTGGAGGCGCAGGGTGCAGGCGGGGGATGACCGCTaGCTCCTGCAGCGGGGCATG +
Preference number: 4 (lower is better)
Translates to: EHYPKKDPTEDLWRRRVQAGDDR*LLQRGM
Trigger: CATGCCCCGCTGCAGGAGGCAGCGGTCATCCCCCGC...CTGCACCCTGCGCCTCCAGAGGTCCTCCGTAGGGTCTTTCTTGGGATAGTGTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR GCA 90 bp AAGAGAAAGCCCCTCACCACACACCAGAGGGGTCAGCCAAGAGCACTTCTCGGGGGCCGAGGCCCCCTCTaGATCAATGGCGTCGGCCGC +
Preference number: 4 (lower is better)
Translates to: KRKPLTTHQRGQPRALLGGRGPL*INGVGR
Trigger: GCGGCCGACGCCATTGATGCAGAGGGGGCCTCGGCC...CCCGAGAAGTGCTCTTGGCTGACCCCTCTGGTGTGTGGTGAGGGGCTTTCTCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR GCA 90 bp CCATCGCCTGCACGGAGAGCCTCTCAGATGAGGAACCGCACTGGGGCCAGGCCGCAGGCAGCCGGGTCATaGTTGAAGAGGGAGTTGGTG +
Preference number: 4 (lower is better)
Translates to: PSPARRASQMRNRTGARPQAAGS*LKRELV
Trigger: CACCAACTCCCTCTTCAAGCATGACCCGGCTGCCTG...CGGCCTGGCCCCAGTGCGGTTCCTCATCTGAGAGGCTCTCCGTGCAGGCGATGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310706.9
ENST00000393930.5
CDS-3UTR GCA 90 bp CCATCGCCTGCACGGAGAGCCTCTCAGATGAGGAACCGCACTGGGGCCAGGCCGTCTTGCCCCATCGCCTaGACGGAGAGCCTCTCAGAT +
Preference number: 4 (lower is better)
Translates to: PSPARRASQMRNRTGARPSCPIA*TESLSD
Trigger: ATCTGAGAGGCTCTCCGTGCAGGCGATGGGGCAAGA...CGGCCTGGCCCCAGTGCGGTTCCTCATCTGAGAGGCTCTCCGTGCAGGCGATGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310706.9
ENST00000393930.5
CDS-3UTR CCA 90 bp CTTCTGGAGCAGGTGACTCACTCCATATCTCCTCCCCATCTCCCCTGGACGGTCCGGGCAGGGCGCGAGTaGCCAGCTCGGCATCGTCCT +
Preference number: 4 (lower is better)
Translates to: LLEQVTHSISPPHLPWTVRAGRE*PARHRP
Trigger: AGGACGATGCCGAGCTGGCCACTCGCGCCCTGCCCG...GACCGTCCAGGGGAGATGGGGAGGAGATATGGAGTGAGTCACCTGCTCCAGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp GAACACTATCCCAAGAAAGACCCTACGGAGGACCTCTGGAGGCGCAGGGTGCAGACAGCGGCCACCAGCTaGGGCGAGCCCATCAGGGCC +
Preference number: 4 (lower is better)
Translates to: EHYPKKDPTEDLWRRRVQTAATS*GEPIRA
Trigger: GGCCCTGATGGGCTCGCCCCAGCTGGTGGCCGCTGT...CTGCACCCTGCGCCTCCAGAGGTCCTCCGTAGGGTCTTTCTTGGGATAGTGTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp TCTGGAGGCGCAGGGTGCAGCAGGAAGTTACACCCCGGCTTCCCCAGCTCAGGCTCTCCATGCGGTTCATaGGGTCCCGGGCGAGGATGT +
Preference number: 4 (lower is better)
Translates to: SGGAGCSRKLHPGFPSSGSPCGS*GPGRGC
Trigger: ACATCCTCGCCCGGGACCCCATGAACCGCATGGAGA...GCCTGAGCTGGGGAAGCCGGGGTGTAACTTCCTGCTGCACCCTGCGCCTCCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp CCCACCAAAGACACAAGAAGAAGGCAGGCCAGGGCACACCGTGCTTGGGGAAGCCGGCAGCAGCGTAGGTaGCAGTGCCCTCGTTGCGGG +
Preference number: 4 (lower is better)
Translates to: PTKDTRRRQARAHRAWGSRQQRR*QCPRCG
Trigger: CCCGCAACGAGGGCACTGCCACCTACGCTGCTGCCG...GCTTCCCCAAGCACGGTGTGCCCTGGCCTGCCTTCTTCTTGTGTCTTTGGTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393931.8
CDS-3UTR TCA 90 bp TCTGGAGGCGCAGGGTGCAGCAGGAAGTTACACCCCGGCTTCCCCAGCTCAGGCGGTTGTGCAGCGTGGTaGTGGCATAGAACAGGACCG +
Preference number: 4 (lower is better)
Translates to: SGGAGCSRKLHPGFPSSGGCAAW*WHRTGP
Trigger: CGGTCCTGTTCTATGCCATCACCACGCTGCACAACC...GCCTGAGCTGGGGAAGCCGGGGTGTAACTTCCTGCTGCACCCTGCGCCTCCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR TCA 90 bp CCATCGCCTGCACGGAGAGCCTCTCAGATGAGGAACCGCACTGGGGCCAGGCCGAACTGTAGTTACGCATaGTCTGCACGAGGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: PSPARRASQMRNRTGARPNCSYA*SARGPG
Trigger: CCCAGGCCCTCGTGCAGATCATGCGTAACTACAGTT...CGGCCTGGCCCCAGTGCGGTTCCTCATCTGAGAGGCTCTCCGTGCAGGCGATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310706.9
ENST00000393930.5
CDS-3UTR TCA 90 bp TCTGGAGGCGCAGGGTGCAGCAGGAAGTTACACCCCGGCTTCCCCAGCTCAGGCACACGGATAGCACCTTaGGCACACGACTGGTGGTCC +
Preference number: 4 (lower is better)
Translates to: SGGAGCSRKLHPGFPSSGTRIAP*AHDWWS
Trigger: GGACCACCAGTCGTGTGCTCAAGGTGCTATCCGTGT...GCCTGAGCTGGGGAAGCCGGGGTGTAACTTCCTGCTGCACCCTGCGCCTCCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR TCA 90 bp CCATCGCCTGCACGGAGAGCCTCTCAGATGAGGAACCGCACTGGGGCCAGGCCGCTGGGATGCCATAGTTaGGACGCACAGAGTTCTGGG +
Preference number: 4 (lower is better)
Translates to: PSPARRASQMRNRTGARPLGCHS*DAQSSG
Trigger: CCCAGAACTCTGTGCGTCTCAACTATGGCATCCCAG...CGGCCTGGCCCCAGTGCGGTTCCTCATCTGAGAGGCTCTCCGTGCAGGCGATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310706.9
ENST00000393930.5
CDS-3UTR GCA 90 bp CCCTGGGGGCTTAGGGCAGTTGGTCGGTGGAGTTCAGTGAGAAAATCAGACCCAGGCTCGGCCAGTCGCTaGAGGTTGGTGGCCTGCCCC +
Preference number: 4 (lower is better)
Translates to: PWGLRAVGRWSSVRKSDPGSASR*RLVACP
Trigger: GGGGCAGGCCACCAACCTGCAGCGACTGGCCGAGCC...TGGGTCTGATTTTCTCACTGAACTCCACCGACCAACTGCCCTAAGCCCCCAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR GCA 90 bp GGCACTTTTCTGTCTTGCCCCATCGCCTGCACGGAGAGCCTCTCAGATGAGGAAGCGGGGGATGACCGCTaGCTCCTGCAGCGGGGCATG +
Preference number: 4 (lower is better)
Translates to: GTFLSCPIACTESLSDEEAGDDR*LLQRGM
Trigger: CATGCCCCGCTGCAGGAGGCAGCGGTCATCCCCCGC...TTCCTCATCTGAGAGGCTCTCCGTGCAGGCGATGGGGCAAGACAGAAAAGTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR GCA 90 bp TTCTGTCTTGCCCCATCGCCTGCACGGAGAGCCTCTCAGATGAGGAACCGCACTGGGCTGCTGTGTGCCTaGAGCTACGTGGCGCTGGGC +
Preference number: 4 (lower is better)
Translates to: FCLAPSPARRASQMRNRTGLLCA*SYVALG
Trigger: GCCCAGCGCCACGTAGCTGCAGGCACACAGCAGCCC...AGTGCGGTTCCTCATCTGAGAGGCTCTCCGTGCAGGCGATGGGGCAAGACAGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310706.9
ENST00000393930.5
CDS-3UTR GCA 90 bp GAAAATCAGACCCAGAGAAGGAACCAAAGCCCTTCCGGGCCCAGGCAGCTGGAGTCCCGGGCGAGGATGTaGAGTGCTCCGGTGCAGCCC +
Preference number: 4 (lower is better)
Translates to: ENQTQRRNQSPSGPRQLESRARM*SAPVQP
Trigger: GGGCTGCACCGGAGCACTGCACATCCTCGCCCGGGA...CTCCAGCTGCCTGGGCCCGGAAGGGCTTTGGTTCCTTCTCTGGGTCTGATTTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR GCA 90 bp AAGAGAAAGCCCCTCACCACACACCAGAGGGGTCAGCCAAGAGCACTTCTCGGGTCCCGGGCGAGGATGTaGAGTGCTCCGGTGCAGCCC +
Preference number: 4 (lower is better)
Translates to: KRKPLTTHQRGQPRALLGSRARM*SAPVQP
Trigger: GGGCTGCACCGGAGCACTGCACATCCTCGCCCGGGA...CCCGAGAAGTGCTCTTGGCTGACCCCTCTGGTGTGTGGTGAGGGGCTTTCTCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR GCA 90 bp AGTGAGAAAATCAGACCCAGAGAAGGAACCAAAGCCCTTCCGGGCCCAGGCAGCGGCCGAGGCCCCCTCTaGATCAATGGCGTCGGCCGC +
Preference number: 4 (lower is better)
Translates to: SEKIRPREGTKALPGPGSGRGPL*INGVGR
Trigger: GCGGCCGACGCCATTGATGCAGAGGGGGCCTCGGCC...GCTGCCTGGGCCCGGAAGGGCTTTGGTTCCTTCTCTGGGTCTGATTTTCTCACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR GCA 90 bp TCTGGAGGCGCAGGGTGCAGCAGGAAGTTACACCCCGGCTTCCCCAGCTCAGGCTCTTGTCCTCGGAGATaGGGAACAGGACGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: SGGAGCSRKLHPGFPSSGSCPRR*GTGRQQ
Trigger: CTGCTGCCGTCCTGTTCCGCATCTCCGAGGACAAGA...GCCTGAGCTGGGGAAGCCGGGGTGTAACTTCCTGCTGCACCCTGCGCCTCCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR GCA 90 bp AGAACACTATCCCAAGAAAGACCCTACGGAGGACCTCTGGAGGCGCAGGGTGCATGGTCGGGCGGCGGCTaGTCCGGACTCTGGCCAAGG +
Preference number: 4 (lower is better)
Translates to: RTLSQERPYGGPLEAQGAWSGGG*SGLWPR
Trigger: CCTTGGCCAGAGTCCGGAGCAGCCGCCGCCCGACCA...TGCACCCTGCGCCTCCAGAGGTCCTCCGTAGGGTCTTTCTTGGGATAGTGTTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393931.8
CDS-3UTR CCA 90 bp CCCTGGGGGCTTAGGGCAGTTGGTCGGTGGAGTTCAGTGAGAAAATCAGACCCAGAACTGAGCTCGGCGTaGTCGGGCGGCGGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: PWGLRAVGRWSSVRKSDPELSSA*SGGGCS
Trigger: GGAGCAGCCGCCGCCCGACCACGCCGAGCTCAGTTC...TGGGTCTGATTTTCTCACTGAACTCCACCGACCAACTGCCCTAAGCCCCCAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310706.9
ENST00000393931.8
CDS-3UTR CCA 90 bp CCCACCAAAGACACAAGAAGAAGGCAGGCCAGGGCACACCGTGCTTGGGGAAGCGCCCCTCCACCTGGGTaGCCAGCAGAAGCGAGCTGT +
Preference number: 4 (lower is better)
Translates to: PTKDTRRRQARAHRAWGSAPPPG*PAEASC
Trigger: ACAGCTCGCTTCTGCTGGCCACCCAGGTGGAGGGGC...GCTTCCCCAAGCACGGTGTGCCCTGGCCTGCCTTCTTCTTGTGTCTTTGGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393931.8
CDS-3UTR CCA 90 bp AAGAGAAAGCCCCTCACCACACACCAGAGGGGTCAGCCAAGAGCACTTCTCGGGGCCTGCCCCTCCACCTaGGTGGCCAGCAGAAGCGAG +
Preference number: 4 (lower is better)
Translates to: KRKPLTTHQRGQPRALLGACPST*VASRSE
Trigger: CTCGCTTCTGCTGGCCACCCAGGTGGAGGGGCAGGC...CCCGAGAAGTGCTCTTGGCTGACCCCTCTGGTGTGTGGTGAGGGGCTTTCTCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp GAATGGGTACTTGAGTCTGAAGCTTTAGTGGCCAGGGCCACAGGGGCGGGGAGGCCAGTCGCTGCAGGTTaGTGGCCTGCCCCTCCACCT +
Preference number: 4 (lower is better)
Translates to: EWVLESEALVARATGAGRPVAAG*WPAPPP
Trigger: AGGTGGAGGGGCAGGCCACCAACCTGCAGCGACTGG...CCTCCCCGCCCCTGTGGCCCTGGCCACTAAAGCTTCAGACTCAAGTACCCATTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp AAGAGAAAGCCCCTCACCACACACCAGAGGGGTCAGCCAAGAGCACTTCTCGGGGCCGACTTGAGCAGCTaGGACGGCTCGGCCAGTCGC +
Preference number: 4 (lower is better)
Translates to: KRKPLTTHQRGQPRALLGADLSS*DGSASR
Trigger: GCGACTGGCCGAGCCGTCCCAGCTGCTCAAGTCGGC...CCCGAGAAGTGCTCTTGGCTGACCCCTCTGGTGTGTGGTGAGGGGCTTTCTCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp CATCCCCACCAAAGACACAAGAAGAAGGCAGGCCAGGGCACACCGTGCTTGGGGAGCAGCCCCTCCCGGTaGTGGGAGAGGTTGTGCAGG +
Preference number: 4 (lower is better)
Translates to: HPHQRHKKKAGQGTPCLGSSPSR*WERLCR
Trigger: CCTGCACAACCTCTCCCACCACCGGGAGGGGCTGCT...CCCCAAGCACGGTGTGCCCTGGCCTGCCTTCTTCTTGTGTCTTTGGTGGGGATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393931.8
CDS-3UTR CCA 90 bp GAATGGGTACTTGAGTCTGAAGCTTTAGTGGCCAGGGCCACAGGGGCGGGGAGGATCTCGGCCTCAGGGTaGCGGCTAGTGAGGTGGCGC +
Preference number: 4 (lower is better)
Translates to: EWVLESEALVARATGAGRISASG*RLVRWR
Trigger: GCGCCACCTCACTAGCCGCCACCCTGAGGCCGAGAT...CCTCCCCGCCCCTGTGGCCCTGGCCACTAAAGCTTCAGACTCAAGTACCCATTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp GAAAATCAGACCCAGAGAAGGAACCAAAGCCCTTCCGGGCCCAGGCAGCTGGAGTCCTGCAGCGGGGCATaGTTGGCTGGGCACAGGGCC +
Preference number: 4 (lower is better)
Translates to: ENQTQRRNQSPSGPRQLESCSGA*LAGHRA
Trigger: GGCCCTGTGCCCAGCCAACCATGCCCCGCTGCAGGA...CTCCAGCTGCCTGGGCCCGGAAGGGCTTTGGTTCCTTCTCTGGGTCTGATTTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp GAACACTATCCCAAGAAAGACCCTACGGAGGACCTCTGGAGGCGCAGGGTGCAGTCCTGCAGCGGGGCATaGTTGGCTGGGCACAGGGCC +
Preference number: 4 (lower is better)
Translates to: EHYPKKDPTEDLWRRRVQSCSGA*LAGHRA
Trigger: GGCCCTGTGCCCAGCCAACCATGCCCCGCTGCAGGA...CTGCACCCTGCGCCTCCAGAGGTCCTCCGTAGGGTCTTTCTTGGGATAGTGTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp TCTGGAGGCGCAGGGTGCAGCAGGAAGTTACACCCCGGCTTCCCCAGCTCAGGCCATCGCTGGAGTACATaGGGCGGTAGGTGGCATCCA +
Preference number: 4 (lower is better)
Translates to: SGGAGCSRKLHPGFPSSGHRWST*GGRWHP
Trigger: TGGATGCCACCTACCGCCCCATGTACTCCAGCGATG...GCCTGAGCTGGGGAAGCCGGGGTGTAACTTCCTGCTGCACCCTGCGCCTCCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp GAAAATCAGACCCAGAGAAGGAACCAAAGCCCTTCCGGGCCCAGGCAGCTGGAGGGGCCCTGGAGGCCCTaGGGGCTTAGGGCAGTTGGT +
Preference number: 4 (lower is better)
Translates to: ENQTQRRNQSPSGPRQLEGPWRP*GLRAVG
Trigger: ACCAACTGCCCTAAGCCCCCAGGGCCTCCAGGGCCC...CTCCAGCTGCCTGGGCCCGGAAGGGCTTTGGTTCCTTCTCTGGGTCTGATTTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp GTTTCAGCGGGGAGATGGGAGGGCCTCCAACAGAAGGAGGTTCTAGAGAGGAGGGGGCCCTGGAGGCCCTaGGGGCTTAGGGCAGTTGGT +
Preference number: 4 (lower is better)
Translates to: VSAGRWEGLQQKEVLERRGPWRP*GLRAVG
Trigger: ACCAACTGCCCTAAGCCCCCAGGGCCTCCAGGGCCC...CCTCCTCTCTAGAACCTCCTTCTGTTGGAGGCCCTCCCATCTCCCCGCTGAAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000393931.8
CDS-3UTR TCA 90 bp GCGGGGAGATGGGAGGGCCTCCAACAGAAGGAGGTTCTAGAGAGGAGGAAAAGCGCACAATGGCCGACTTaGGCAGCTGGGACGGCTCGG +
Preference number: 4 (lower is better)
Translates to: AGRWEGLQQKEVLERRKSAQWPT*AAGTAR
Trigger: CCGAGCCGTCCCAGCTGCTCAAGTCGGCCATTGTGC...GCTTTTCCTCCTCTCTAGAACCTCCTTCTGTTGGAGGCCCTCCCATCTCCCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393931.8
CDS-3UTR TCA 90 bp AAAACAGAATGGGTACTTGAGTCTGAAGCTTTAGTGGCCAGGGCCACAGGGGCGGGACGAGGCGGGGGATaGCCGCTGCCTCCTGCAGCG +
Preference number: 4 (lower is better)
Translates to: KTEWVLESEALVARATGAGRGGG*PLPPAA
Trigger: CGCTGCAGGAGGCAGCGGTCATCCCCCGCCTCGTCC...CGCCCCTGTGGCCCTGGCCACTAAAGCTTCAGACTCAAGTACCCATTCTGTTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR TCA 90 bp GGGAAAACAGAATGGGTACTTGAGTCTGAAGCTTTAGTGGCCAGGGCCACAGGGGGACGAGGCGGGGGATaGCCGCTGCCTCCTGCAGCG +
Preference number: 4 (lower is better)
Translates to: GKTEWVLESEALVARATGGRGGG*PLPPAA
Trigger: CGCTGCAGGAGGCAGCGGTCATCCCCCGCCTCGTCC...CCCTGTGGCCCTGGCCACTAAAGCTTCAGACTCAAGTACCCATTCTGTTTTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR TCA 90 bp CTTCTGGAGCAGGTGACTCACTCCATATCTCCTCCCCATCTCCCCTGGACGGTCAGTGCAGCAACTCCATaGGTGGGGCCGAGGCCCCCT +
Preference number: 4 (lower is better)
Translates to: LLEQVTHSISPPHLPWTVSAATP*VGPRPP
Trigger: AGGGGGCCTCGGCCCCACTCATGGAGTTGCTGCACT...GACCGTCCAGGGGAGATGGGGAGGAGATATGGAGTGAGTCACCTGCTCCAGAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR TCA 90 bp TGGAGGCCCTGGGGGCTTAGGGCAGTTGGTCGGTGGAGTTCAGTGAGAAAATCATGGGGTACGGGGGCCTaGGGCCGTCGCTGTAGGTGT +
Preference number: 4 (lower is better)
Translates to: WRPWGLRAVGRWSSVRKSWGTGA*GRRCRC
Trigger: ACACCTACAGCGACGGCCTCAGGCCCCCGTACCCCA...TGATTTTCTCACTGAACTCCACCGACCAACTGCCCTAAGCCCCCAGGGCCTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR TCA 90 bp CTTCTGGAGCAGGTGACTCACTCCATATCTCCTCCCCATCTCCCCTGGACGGTCGAGCTCCCTGGGGAGTaGGGGGTGGGCAAAGCCAAC +
Preference number: 4 (lower is better)
Translates to: LLEQVTHSISPPHLPWTVELPGE*GVGKAN
Trigger: GTTGGCTTTGCCCACCCCTCACTCCCCAGGGAGCTC...GACCGTCCAGGGGAGATGGGGAGGAGATATGGAGTGAGTCACCTGCTCCAGAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR TCA 90 bp GAAAATCAGACCCAGAGAAGGAACCAAAGCCCTTCCGGGCCCAGGCAGCTGGAGGGTGGGACAGGGGTGTaGGGAAGCTGTCCCCAGAGC +
Preference number: 4 (lower is better)
Translates to: ENQTQRRNQSPSGPRQLEGGTGV*GSCPQS
Trigger: GCTCTGGGGACAGCTTCCTCACACCCCTGTCCCACC...CTCCAGCTGCCTGGGCCCGGAAGGGCTTTGGTTCCTTCTCTGGGTCTGATTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR TCA 90 bp GAACACTATCCCAAGAAAGACCCTACGGAGGACCTCTGGAGGCGCAGGGTGCAGGGTGGGACAGGGGTGTaGGGAAGCTGTCCCCAGAGC +
Preference number: 4 (lower is better)
Translates to: EHYPKKDPTEDLWRRRVQGGTGV*GSCPQS
Trigger: GCTCTGGGGACAGCTTCCTCACACCCCTGTCCCACC...CTGCACCCTGCGCCTCCAGAGGTCCTCCGTAGGGTCTTTCTTGGGATAGTGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR GCA 90 bp AAGAGAAAGCCCCTCACCACACACCAGAGGGGTCAGCCAAGAGCACTTCTCGGGCCAGGCGGGGGCTGTTaGTGGTCAGGTGCTTGCCCA +
Preference number: 4 (lower is better)
Translates to: KRKPLTTHQRGQPRALLGPGGGC*WSGACP
Trigger: TGGGCAAGCACCTGACCAGCAACAGCCCCCGCCTGG...CCCGAGAAGTGCTCTTGGCTGACCCCTCTGGTGTGTGGTGAGGGGCTTTCTCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR GCA 90 bp CATCCCCACCAAAGACACAAGAAGAAGGCAGGCCAGGGCACACCGTGCTTGGGGATGACCGCTGCCTCCTaGAGCGGGGCATGGTTGGCT +
Preference number: 4 (lower is better)
Translates to: HPHQRHKKKAGQGTPCLGMTAAS*SGAWLA
Trigger: AGCCAACCATGCCCCGCTGCAGGAGGCAGCGGTCAT...CCCCAAGCACGGTGTGCCCTGGCCTGCCTTCTTCTTGTGTCTTTGGTGGGGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393931.8
CDS-3UTR GCA 90 bp AGTGAGAAAATCAGACCCAGAGAAGGAACCAAAGCCCTTCCGGGCCCAGGCAGCGGGCTGCTGTGTGCCTaGAGCTACGTGGCGCTGGGC +
Preference number: 4 (lower is better)
Translates to: SEKIRPREGTKALPGPGSGLLCA*SYVALG
Trigger: GCCCAGCGCCACGTAGCTGCAGGCACACAGCAGCCC...GCTGCCTGGGCCCGGAAGGGCTTTGGTTCCTTCTCTGGGTCTGATTTTCTCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR GCA 90 bp TTCTGTCTTGCCCCATCGCCTGCACGGAGAGCCTCTCAGATGAGGAACCGCACTGGCGAGGATGTGCAGTaGTCCGGTGCAGCCCTCCAC +
Preference number: 4 (lower is better)
Translates to: FCLAPSPARRASQMRNRTGEDVQ*SGAALH
Trigger: GTGGAGGGCTGCACCGGAGCACTGCACATCCTCGCC...AGTGCGGTTCCTCATCTGAGAGGCTCTCCGTGCAGGCGATGGGGCAAGACAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310706.9
ENST00000393930.5
CDS-3UTR GCA 90 bp GTTTCAGCGGGGAGATGGGAGGGCCTCCAACAGAAGGAGGTTCTAGAGAGGAGGGGCGAGGATGTGCAGTaGTCCGGTGCAGCCCTCCAC +
Preference number: 4 (lower is better)
Translates to: VSAGRWEGLQQKEVLERRGEDVQ*SGAALH
Trigger: GTGGAGGGCTGCACCGGAGCACTGCACATCCTCGCC...CCTCCTCTCTAGAACCTCCTTCTGTTGGAGGCCCTCCCATCTCCCCGCTGAAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393931.8
CDS-3UTR GCA 90 bp CATCCCCACCAAAGACACAAGAAGAAGGCAGGCCAGGGCACACCGTGCTTGGGGGCCGGAAGATCTCCATaGGGTTCATGGGGTCCCGGG +
Preference number: 4 (lower is better)
Translates to: HPHQRHKKKAGQGTPCLGAGRSP*GSWGPG
Trigger: CCCGGGACCCCATGAACCGCATGGAGATCTTCCGGC...CCCCAAGCACGGTGTGCCCTGGCCTGCCTTCTTCTTGTGTCTTTGGTGGGGATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000393931.8
CDS-3UTR GCA 90 bp TTCTGTCTTGCCCCATCGCCTGCACGGAGAGCCTCTCAGATGAGGAACCGCACTGGCCAGCATGTGGTCTaGAGTGGGGTACGGGGGCCT +
Preference number: 4 (lower is better)
Translates to: FCLAPSPARRASQMRNRTGQHVV*SGVRGP
Trigger: AGGCCCCCGTACCCCACTGCAGACCACATGCTGGCC...AGTGCGGTTCCTCATCTGAGAGGCTCTCCGTGCAGGCGATGGGGCAAGACAGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310706.9
ENST00000393930.5
CDS-3UTR GCA 90 bp AAGAGAAAGCCCCTCACCACACACCAGAGGGGTCAGCCAAGAGCACTTCTCGGGGGCCAGGGCACACCGTaGTTGGGGAAGCTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: KRKPLTTHQRGQPRALLGGQGTP*LGKLSS
Trigger: GCTGCTGAGCTTCCCCAAGCACGGTGTGCCCTGGCC...CCCGAGAAGTGCTCTTGGCTGACCCCTCTGGTGTGTGGTGAGGGGCTTTCTCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000393931.8
CDS-3UTR CCA 90 bp TTCTGTCTTGCCCCATCGCCTGCACGGAGAGCCTCTCAGATGAGGAACCGCACTCCAGATCACCTTGGCTaGGGGGCACCCCCTGGGTGT +
Preference number: 4 (lower is better)
Translates to: FCLAPSPARRASQMRNRTPDHLG*GAPPGC
Trigger: ACACCCAGGGGGTGCCCCCCAGCCAAGGTGATCTGG...AGTGCGGTTCCTCATCTGAGAGGCTCTCCGTGCAGGCGATGGGGCAAGACAGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000310706.9
ENST00000393930.5
CDS-3UTR CCA 90 bp TGGAGGCCCTGGGGGCTTAGGGCAGTTGGTCGGTGGAGTTCAGTGAGAAAATCAGCCTGCCCCTCCACCTaGGTGGCCAGCAGAAGCGAG +
Preference number: 4 (lower is better)
Translates to: WRPWGLRAVGRWSSVRKSACPST*VASRSE
Trigger: CTCGCTTCTGCTGGCCACCCAGGTGGAGGGGCAGGC...TGATTTTCTCACTGAACTCCACCGACCAACTGCCCTAAGCCCCCAGGGCCTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp AAGAGAAAGCCCCTCACCACACACCAGAGGGGTCAGCCAAGAGCACTTCTCGGGCCAGTCGCTGCAGGTTaGTGGCCTGCCCCTCCACCT +
Preference number: 4 (lower is better)
Translates to: KRKPLTTHQRGQPRALLGPVAAG*WPAPPP
Trigger: AGGTGGAGGGGCAGGCCACCAACCTGCAGCGACTGG...CCCGAGAAGTGCTCTTGGCTGACCCCTCTGGTGTGTGGTGAGGGGCTTTCTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp TGGAGGCCCTGGGGGCTTAGGGCAGTTGGTCGGTGGAGTTCAGTGAGAAAATCAGCCGACTTGAGCAGCTaGGACGGCTCGGCCAGTCGC +
Preference number: 4 (lower is better)
Translates to: WRPWGLRAVGRWSSVRKSADLSS*DGSASR
Trigger: GCGACTGGCCGAGCCGTCCCAGCTGCTCAAGTCGGC...TGATTTTCTCACTGAACTCCACCGACCAACTGCCCTAAGCCCCCAGGGCCTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp GAACACTATCCCAAGAAAGACCCTACGGAGGACCTCTGGAGGCGCAGGGTGCAGGGCGCACGGCCATCTTaGCGCCCTCCTGGTACAGGA +
Preference number: 4 (lower is better)
Translates to: EHYPKKDPTEDLWRRRVQGARPS*RPPGTG
Trigger: TCCTGTACCAGGAGGGCGCCAAGATGGCCGTGCGCC...CTGCACCCTGCGCCTCCAGAGGTCCTCCGTAGGGTCTTTCTTGGGATAGTGTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp GGCACTTTTCTGTCTTGCCCCATCGCCTGCACGGAGAGCCTCTCAGATGAGGAAGGCGGGGGCTGTTGCTaGTCAGGTGCTTGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: GTFLSCPIACTESLSDEEGGGCC*SGACPG
Trigger: CCCTGGGCAAGCACCTGACCAGCAACAGCCCCCGCC...TTCCTCATCTGAGAGGCTCTCCGTGCAGGCGATGGGGCAAGACAGAAAAGTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp CTTCTGGAGCAGGTGACTCACTCCATATCTCCTCCCCATCTCCCCTGGACGGTCATCTCGGCCTCAGGGTaGCGGCTAGTGAGGTGGCGC +
Preference number: 4 (lower is better)
Translates to: LLEQVTHSISPPHLPWTVISASG*RLVRWR
Trigger: GCGCCACCTCACTAGCCGCCACCCTGAGGCCGAGAT...GACCGTCCAGGGGAGATGGGGAGGAGATATGGAGTGAGTCACCTGCTCCAGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp CTTCTGGAGCAGGTGACTCACTCCATATCTCCTCCCCATCTCCCCTGGACGGTCGCAGCGGGGCATGGTTaGCTGGGCACAGGGCCAGAT +
Preference number: 4 (lower is better)
Translates to: LLEQVTHSISPPHLPWTVAAGHG*LGTGPD
Trigger: ATCTGGCCCTGTGCCCAGCCAACCATGCCCCGCTGC...GACCGTCCAGGGGAGATGGGGAGGAGATATGGAGTGAGTCACCTGCTCCAGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp GAACACTATCCCAAGAAAGACCCTACGGAGGACCTCTGGAGGCGCAGGGTGCAGGCAGCGGGGCATGGTTaGCTGGGCACAGGGCCAGAT +
Preference number: 4 (lower is better)
Translates to: EHYPKKDPTEDLWRRRVQAAGHG*LGTGPD
Trigger: ATCTGGCCCTGTGCCCAGCCAACCATGCCCCGCTGC...CTGCACCCTGCGCCTCCAGAGGTCCTCCGTAGGGTCTTTCTTGGGATAGTGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp GAATGGGTACTTGAGTCTGAAGCTTTAGTGGCCAGGGCCACAGGGGCGGGGAGGTGGCGCTGGGCATCCTaGTGGGCCTTCACCAGCAGT +
Preference number: 4 (lower is better)
Translates to: EWVLESEALVARATGAGRWRWAS*WAFTSS
Trigger: ACTGCTGGTGAAGGCCCACCAGGATGCCCAGCGCCA...CCTCCCCGCCCCTGTGGCCCTGGCCACTAAAGCTTCAGACTCAAGTACCCATTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp AAGAGAAAGCCCCTCACCACACACCAGAGGGGTCAGCCAAGAGCACTTCTCGGGGCAGCTACGTGGCGCTaGGCATCCTGGTGGGCCTTC +
Preference number: 4 (lower is better)
Translates to: KRKPLTTHQRGQPRALLGAATWR*ASWWAF
Trigger: GAAGGCCCACCAGGATGCCCAGCGCCACGTAGCTGC...CCCGAGAAGTGCTCTTGGCTGACCCCTCTGGTGTGTGGTGAGGGGCTTTCTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp AAGAGAAAGCCCCTCACCACACACCAGAGGGGTCAGCCAAGAGCACTTCTCGGGGCCGCCTCCTTGTCCTaGGCCAGCTCACACAGCACC +
Preference number: 4 (lower is better)
Translates to: KRKPLTTHQRGQPRALLGAASLS*ASSHST
Trigger: GGTGCTGTGTGAGCTGGCCCAGGACAAGGAGGCGGC...CCCGAGAAGTGCTCTTGGCTGACCCCTCTGGTGTGTGGTGAGGGGCTTTCTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp GAAAATCAGACCCAGAGAAGGAACCAAAGCCCTTCCGGGCCCAGGCAGCTGGAGGCCGCCTCCTTGTCCTaGGCCAGCTCACACAGCACC +
Preference number: 4 (lower is better)
Translates to: ENQTQRRNQSPSGPRQLEAASLS*ASSHST
Trigger: GGTGCTGTGTGAGCTGGCCCAGGACAAGGAGGCGGC...CTCCAGCTGCCTGGGCCCGGAAGGGCTTTGGTTCCTTCTCTGGGTCTGATTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp GGCACTTTTCTGTCTTGCCCCATCGCCTGCACGGAGAGCCTCTCAGATGAGGAACGGCAGCAGCGTAGGTaGCAGTGCCCTCGTTGCGGG +
Preference number: 4 (lower is better)
Translates to: GTFLSCPIACTESLSDEERQQRR*QCPRCG
Trigger: CCCGCAACGAGGGCACTGCCACCTACGCTGCTGCCG...TTCCTCATCTGAGAGGCTCTCCGTGCAGGCGATGGGGCAAGACAGAAAAGTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp TCTGGAGGCGCAGGGTGCAGCAGGAAGTTACACCCCGGCTTCCCCAGCTCAGGCGCGCTTCCGGTAGTCTaGGTTCTTGTCCTCGGAGAT +
Preference number: 4 (lower is better)
Translates to: SGGAGCSRKLHPGFPSSGALPVV*VLVLGD
Trigger: ATCTCCGAGGACAAGAACCCAGACTACCGGAAGCGC...GCCTGAGCTGGGGAAGCCGGGGTGTAACTTCCTGCTGCACCCTGCGCCTCCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp CTTCTGGAGCAGGTGACTCACTCCATATCTCCTCCCCATCTCCCCTGGACGGTCCCTACGGAGGACCTCTaGAGGCGCAGGGTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: LLEQVTHSISPPHLPWTVPTEDL*RRRVQQ
Trigger: CTGCTGCACCCTGCGCCTCCAGAGGTCCTCCGTAGG...GACCGTCCAGGGGAGATGGGGAGGAGATATGGAGTGAGTCACCTGCTCCAGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR TCA 90 bp CGTTGCTGGGGGAAAACAGAATGGGTACTTGAGTCTGAAGCTTTAGTGGCCAGGGCGCGGACAGCGAACTaGGCTCGGCGTGGTCGGGCG +
Preference number: 4 (lower is better)
Translates to: RCWGKTEWVLESEALVARARTAN*ARRGRA
Trigger: CGCCCGACCACGCCGAGCTCAGTTCGCTGTCCGCGC...CCTGGCCACTAAAGCTTCAGACTCAAGTACCCATTCTGTTTTCCCCCAGCAACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310706.9
ENST00000393931.8
CDS-3UTR TCA 90 bp AGTTCAGTGAGAAAATCAGACCCAGAGAAGGAACCAAAGCCCTTCCGGGCCCAGACTGAGTATGGGGCCTaGCCGGGCCGGGTCGGGGTC +
Preference number: 4 (lower is better)
Translates to: SSVRKSDPEKEPKPFRAQTEYGA*PGRVGV
Trigger: GACCCCGACCCGGCCCGGTCAGGCCCCATACTCAGT...CTGGGCCCGGAAGGGCTTTGGTTCCTTCTCTGGGTCTGATTTTCTCACTGAACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310706.9
ENST00000393931.8
CDS-3UTR TCA 90 bp AGAACACTATCCCAAGAAAGACCCTACGGAGGACCTCTGGAGGCGCAGGGTGCACGAGCTGTCCTCGCCTaGCACACCAGGGCACATGGC +
Preference number: 4 (lower is better)
Translates to: RTLSQERPYGGPLEAQGARAVLA*HTRAHG
Trigger: GCCATGTGCCCTGGTGTGTCAGGCGAGGACAGCTCG...TGCACCCTGCGCCTCCAGAGGTCCTCCGTAGGGTCTTTCTTGGGATAGTGTTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR TCA 90 bp AAGAGAAAGCCCCTCACCACACACCAGAGGGGTCAGCCAAGAGCACTTCTCGGGGGATGCCACCCGACTTaGAGATGGCGAGCAGCCCCT +
Preference number: 4 (lower is better)
Translates to: KRKPLTTHQRGQPRALLGGCHPT*RWRAAP
Trigger: AGGGGCTGCTCGCCATCTTCAAGTCGGGTGGCATCC...CCCGAGAAGTGCTCTTGGCTGACCCCTCTGGTGTGTGGTGAGGGGCTTTCTCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR TCA 90 bp GGCACTTTTCTGTCTTGCCCCATCGCCTGCACGGAGAGCCTCTCAGATGAGGAAGAGCTCCCTGGGGAGTaGGGGGTGGGCAAAGCCAAC +
Preference number: 4 (lower is better)
Translates to: GTFLSCPIACTESLSDEEELPGE*GVGKAN
Trigger: GTTGGCTTTGCCCACCCCTCACTCCCCAGGGAGCTC...TTCCTCATCTGAGAGGCTCTCCGTGCAGGCGATGGGGCAAGACAGAAAAGTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR TCA 90 bp TGGAGGCCCTGGGGGCTTAGGGCAGTTGGTCGGTGGAGTTCAGTGAGAAAATCAGAGCTCCCTGGGGAGTaGGGGGTGGGCAAAGCCAAC +
Preference number: 4 (lower is better)
Translates to: WRPWGLRAVGRWSSVRKSELPGE*GVGKAN
Trigger: GTTGGCTTTGCCCACCCCTCACTCCCCAGGGAGCTC...TGATTTTCTCACTGAACTCCACCGACCAACTGCCCTAAGCCCCCAGGGCCTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR TCA 90 bp CCCTGGGGGCTTAGGGCAGTTGGTCGGTGGAGTTCAGTGAGAAAATCAGACCCAGGTGGGACAGGGGTGTaGGGAAGCTGTCCCCAGAGC +
Preference number: 4 (lower is better)
Translates to: PWGLRAVGRWSSVRKSDPGGTGV*GSCPQS
Trigger: GCTCTGGGGACAGCTTCCTCACACCCCTGTCCCACC...TGGGTCTGATTTTCTCACTGAACTCCACCGACCAACTGCCCTAAGCCCCCAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR GCA 90 bp AAAACAGAATGGGTACTTGAGTCTGAAGCTTTAGTGGCCAGGGCCACAGGGGCGGGCTCGGCCAGTCGCTaGAGGTTGGTGGCCTGCCCC +
Preference number: 4 (lower is better)
Translates to: KTEWVLESEALVARATGAGSASR*RLVACP
Trigger: GGGGCAGGCCACCAACCTGCAGCGACTGGCCGAGCC...CGCCCCTGTGGCCCTGGCCACTAAAGCTTCAGACTCAAGTACCCATTCTGTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR GCA 90 bp AGAACACTATCCCAAGAAAGACCCTACGGAGGACCTCTGGAGGCGCAGGGTGCAAGGGGCACCATCTTTTaGAGCCCGTCGGCCAGGCGC +
Preference number: 4 (lower is better)
Translates to: RTLSQERPYGGPLEAQGARGTIF*SPSARR
Trigger: GCGCCTGGCCGACGGGCTGCAAAAGATGGTGCCCCT...TGCACCCTGCGCCTCCAGAGGTCCTCCGTAGGGTCTTTCTTGGGATAGTGTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR GCA 90 bp AAGAGAAAGCCCCTCACCACACACCAGAGGGGTCAGCCAAGAGCACTTCTCGGGTGCTTGCCCAGGGCCTaGATCCCACCAGCCTCCACA +
Preference number: 4 (lower is better)
Translates to: KRKPLTTHQRGQPRALLGCLPRA*IPPAST
Trigger: TGTGGAGGCTGGTGGGATGCAGGCCCTGGGCAAGCA...CCCGAGAAGTGCTCTTGGCTGACCCCTCTGGTGTGTGGTGAGGGGCTTTCTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR GCA 90 bp GAACACTATCCCAAGAAAGACCCTACGGAGGACCTCTGGAGGCGCAGGGTGCAGTGCTGGTCAGGTGCTTaGCCAGGGCCTGCATCCCAC +
Preference number: 4 (lower is better)
Translates to: EHYPKKDPTEDLWRRRVQCWSGA*PGPASH
Trigger: GTGGGATGCAGGCCCTGGGCAAGCACCTGACCAGCA...CTGCACCCTGCGCCTCCAGAGGTCCTCCGTAGGGTCTTTCTTGGGATAGTGTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR GCA 90 bp TGGAGGCCCTGGGGGCTTAGGGCAGTTGGTCGGTGGAGTTCAGTGAGAAAATCACCAGGCGGGGGCTGTTaGTGGTCAGGTGCTTGCCCA +
Preference number: 4 (lower is better)
Translates to: WRPWGLRAVGRWSSVRKSPGGGC*WSGACP
Trigger: TGGGCAAGCACCTGACCAGCAACAGCCCCCGCCTGG...TGATTTTCTCACTGAACTCCACCGACCAACTGCCCTAAGCCCCCAGGGCCTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR GCA 90 bp AAGAGAAAGCCCCTCACCACACACCAGAGGGGTCAGCCAAGAGCACTTCTCGGGGTCCACAGGCAGTTCTaGACCAGGCGGGGGCTGTTG +
Preference number: 4 (lower is better)
Translates to: KRKPLTTHQRGQPRALLGVHRQF*TRRGLL
Trigger: CAACAGCCCCCGCCTGGTGCAGAACTGCCTGTGGAC...CCCGAGAAGTGCTCTTGGCTGACCCCTCTGGTGTGTGGTGAGGGGCTTTCTCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR GCA 90 bp GAAAATCAGACCCAGAGAAGGAACCAAAGCCCTTCCGGGCCCAGGCAGCTGGAGATGACCGCTGCCTCCTaGAGCGGGGCATGGTTGGCT +
Preference number: 4 (lower is better)
Translates to: ENQTQRRNQSPSGPRQLEMTAAS*SGAWLA
Trigger: AGCCAACCATGCCCCGCTGCAGGAGGCAGCGGTCAT...CTCCAGCTGCCTGGGCCCGGAAGGGCTTTGGTTCCTTCTCTGGGTCTGATTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR GCA 90 bp AGTTCAGTGAGAAAATCAGACCCAGAGAAGGAACCAAAGCCCTTCCGGGCCCAGGCGGGGGATGACCGCTaGCTCCTGCAGCGGGGCATG +
Preference number: 4 (lower is better)
Translates to: SSVRKSDPEKEPKPFRAQAGDDR*LLQRGM
Trigger: CATGCCCCGCTGCAGGAGGCAGCGGTCATCCCCCGC...CTGGGCCCGGAAGGGCTTTGGTTCCTTCTCTGGGTCTGATTTTCTCACTGAACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR GCA 90 bp TTCTGTCTTGCCCCATCGCCTGCACGGAGAGCCTCTCAGATGAGGAACCGCACTGCCGGAAGATCTCCATaGGGTTCATGGGGTCCCGGG +
Preference number: 4 (lower is better)
Translates to: FCLAPSPARRASQMRNRTAGRSP*GSWGPG
Trigger: CCCGGGACCCCATGAACCGCATGGAGATCTTCCGGC...AGTGCGGTTCCTCATCTGAGAGGCTCTCCGTGCAGGCGATGGGGCAAGACAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310706.9
ENST00000393930.5
CDS-3UTR GCA 90 bp AAGAGAAAGCCCCTCACCACACACCAGAGGGGTCAGCCAAGAGCACTTCTCGGGGCCGGAAGATCTCCATaGGGTTCATGGGGTCCCGGG +
Preference number: 4 (lower is better)
Translates to: KRKPLTTHQRGQPRALLGAGRSP*GSWGPG
Trigger: CCCGGGACCCCATGAACCGCATGGAGATCTTCCGGC...CCCGAGAAGTGCTCTTGGCTGACCCCTCTGGTGTGTGGTGAGGGGCTTTCTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR GCA 90 bp AGTTCAGTGAGAAAATCAGACCCAGAGAAGGAACCAAAGCCCTTCCGGGCCCAGGGCCGAGGCCCCCTCTaGATCAATGGCGTCGGCCGC +
Preference number: 4 (lower is better)
Translates to: SSVRKSDPEKEPKPFRAQGRGPL*INGVGR
Trigger: GCGGCCGACGCCATTGATGCAGAGGGGGCCTCGGCC...CTGGGCCCGGAAGGGCTTTGGTTCCTTCTCTGGGTCTGATTTTCTCACTGAACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR GCA 90 bp GAATGGGTACTTGAGTCTGAAGCTTTAGTGGCCAGGGCCACAGGGGCGGGGAGGCCCTCGTTGCGGGAGTaGAGCAACTCCATGAGTGGG +
Preference number: 4 (lower is better)
Translates to: EWVLESEALVARATGAGRPSLRE*SNSMSG
Trigger: CCCACTCATGGAGTTGCTGCACTCCCGCAACGAGGG...CCTCCCCGCCCCTGTGGCCCTGGCCACTAAAGCTTCAGACTCAAGTACCCATTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR GCA 90 bp GAAAATCAGACCCAGAGAAGGAACCAAAGCCCTTCCGGGCCCAGGCAGCTGGAGCAGCGTAGGTGGCAGTaGCCTCGTTGCGGGAGTGCA +
Preference number: 4 (lower is better)
Translates to: ENQTQRRNQSPSGPRQLEQRRWQ*PRCGSA
Trigger: TGCACTCCCGCAACGAGGGCACTGCCACCTACGCTG...CTCCAGCTGCCTGGGCCCGGAAGGGCTTTGGTTCCTTCTCTGGGTCTGATTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR GCA 90 bp AAGAGAAAGCCCCTCACCACACACCAGAGGGGTCAGCCAAGAGCACTTCTCGGGCAGCGTAGGTGGCAGTaGCCTCGTTGCGGGAGTGCA +
Preference number: 4 (lower is better)
Translates to: KRKPLTTHQRGQPRALLGQRRWQ*PRCGSA
Trigger: TGCACTCCCGCAACGAGGGCACTGCCACCTACGCTG...CCCGAGAAGTGCTCTTGGCTGACCCCTCTGGTGTGTGGTGAGGGGCTTTCTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR GCA 90 bp GAACACTATCCCAAGAAAGACCCTACGGAGGACCTCTGGAGGCGCAGGGTGCAGCAGCGTAGGTGGCAGTaGCCTCGTTGCGGGAGTGCA +
Preference number: 4 (lower is better)
Translates to: EHYPKKDPTEDLWRRRVQQRRWQ*PRCGSA
Trigger: TGCACTCCCGCAACGAGGGCACTGCCACCTACGCTG...CTGCACCCTGCGCCTCCAGAGGTCCTCCGTAGGGTCTTTCTTGGGATAGTGTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp GGCACTTTTCTGTCTTGCCCCATCGCCTGCACGGAGAGCCTCTCAGATGAGGAAAGGGCACGCAGGTGTTaGCGCCCGAGTGGATACCCG +
Preference number: 4 (lower is better)
Translates to: GTFLSCPIACTESLSDEERARRC*RPSGYP
Trigger: CGGGTATCCACTCGGGCGCCAACACCTGCGTGCCCT...TTCCTCATCTGAGAGGCTCTCCGTGCAGGCGATGGGGCAAGACAGAAAAGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp AGAACACTATCCCAAGAAAGACCCTACGGAGGACCTCTGGAGGCGCAGGGTGCACCAGATCACCTTGGCTaGGGGGCACCCCCTGGGTGT +
Preference number: 4 (lower is better)
Translates to: RTLSQERPYGGPLEAQGAPDHLG*GAPPGC
Trigger: ACACCCAGGGGGTGCCCCCCAGCCAAGGTGATCTGG...TGCACCCTGCGCCTCCAGAGGTCCTCCGTAGGGTCTTTCTTGGGATAGTGTTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp GAACACTATCCCAAGAAAGACCCTACGGAGGACCTCTGGAGGCGCAGGGTGCAGCCTCCCGCACCCGTTTaGCCCTGGCTGTTGTGGACA +
Preference number: 4 (lower is better)
Translates to: EHYPKKDPTEDLWRRRVQPPAPV*PWLLWT
Trigger: TGTCCACAACAGCCAGGGCCAAACGGGTGCGGGAGG...CTGCACCCTGCGCCTCCAGAGGTCCTCCGTAGGGTCTTTCTTGGGATAGTGTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp GAACACTATCCCAAGAAAGACCCTACGGAGGACCTCTGGAGGCGCAGGGTGCAGACACACCAGGGCACATaGCCTCCCGCACCCGTTTGG +
Preference number: 4 (lower is better)
Translates to: EHYPKKDPTEDLWRRRVQTHQGT*PPAPVW
Trigger: CCAAACGGGTGCGGGAGGCCATGTGCCCTGGTGTGT...CTGCACCCTGCGCCTCCAGAGGTCCTCCGTAGGGTCTTTCTTGGGATAGTGTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp AGTTCAGTGAGAAAATCAGACCCAGAGAAGGAACCAAAGCCCTTCCGGGCCCAGCGGGCAGGGCGCGAGTaGCCAGCTCGGCATCGTCCT +
Preference number: 4 (lower is better)
Translates to: SSVRKSDPEKEPKPFRAQRAGRE*PARHRP
Trigger: AGGACGATGCCGAGCTGGCCACTCGCGCCCTGCCCG...CTGGGCCCGGAAGGGCTTTGGTTCCTTCTCTGGGTCTGATTTTCTCACTGAACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp GAATGGGTACTTGAGTCTGAAGCTTTAGTGGCCAGGGCCACAGGGGCGGGGAGGTGTGCAGGATGCTGGTaGTGCAGCGGGCTGTGTCCA +
Preference number: 4 (lower is better)
Translates to: EWVLESEALVARATGAGRCAGCW*CSGLCP
Trigger: TGGACACAGCCCGCTGCACCACCAGCATCCTGCACA...CCTCCCCGCCCCTGTGGCCCTGGCCACTAAAGCTTCAGACTCAAGTACCCATTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp AGTGAGAAAATCAGACCCAGAGAAGGAACCAAAGCCCTTCCGGGCCCAGGCAGCAGCAGCCCCTCCCGGTaGTGGGAGAGGTTGTGCAGG +
Preference number: 4 (lower is better)
Translates to: SEKIRPREGTKALPGPGSSSPSR*WERLCR
Trigger: CCTGCACAACCTCTCCCACCACCGGGAGGGGCTGCT...GCTGCCTGGGCCCGGAAGGGCTTTGGTTCCTTCTCTGGGTCTGATTTTCTCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp AGAACACTATCCCAAGAAAGACCCTACGGAGGACCTCTGGAGGCGCAGGGTGCAGGCGCACGGCCATCTTaGCGCCCTCCTGGTACAGGA +
Preference number: 4 (lower is better)
Translates to: RTLSQERPYGGPLEAQGAGARPS*RPPGTG
Trigger: TCCTGTACCAGGAGGGCGCCAAGATGGCCGTGCGCC...TGCACCCTGCGCCTCCAGAGGTCCTCCGTAGGGTCTTTCTTGGGATAGTGTTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp CCCTGGGGGCTTAGGGCAGTTGGTCGGTGGAGTTCAGTGAGAAAATCAGACCCAATCTCGGCCTCAGGGTaGCGGCTAGTGAGGTGGCGC +
Preference number: 4 (lower is better)
Translates to: PWGLRAVGRWSSVRKSDPISASG*RLVRWR
Trigger: GCGCCACCTCACTAGCCGCCACCCTGAGGCCGAGAT...TGGGTCTGATTTTCTCACTGAACTCCACCGACCAACTGCCCTAAGCCCCCAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp GAACACTATCCCAAGAAAGACCCTACGGAGGACCTCTGGAGGCGCAGGGTGCAGGCCTTCACCAGCAGTTaGACGAGGCGGGGGATGACC +
Preference number: 4 (lower is better)
Translates to: EHYPKKDPTEDLWRRRVQAFTSS*TRRGMT
Trigger: GGTCATCCCCCGCCTCGTCCAACTGCTGGTGAAGGC...CTGCACCCTGCGCCTCCAGAGGTCCTCCGTAGGGTCTTTCTTGGGATAGTGTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp GAAAATCAGACCCAGAGAAGGAACCAAAGCCCTTCCGGGCCCAGGCAGCTGGAGTGGCGCTGGGCATCCTaGTGGGCCTTCACCAGCAGT +
Preference number: 4 (lower is better)
Translates to: ENQTQRRNQSPSGPRQLEWRWAS*WAFTSS
Trigger: ACTGCTGGTGAAGGCCCACCAGGATGCCCAGCGCCA...CTCCAGCTGCCTGGGCCCGGAAGGGCTTTGGTTCCTTCTCTGGGTCTGATTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp CCCTGGGGGCTTAGGGCAGTTGGTCGGTGGAGTTCAGTGAGAAAATCAGACCCAGCAGCTACGTGGCGCTaGGCATCCTGGTGGGCCTTC +
Preference number: 4 (lower is better)
Translates to: PWGLRAVGRWSSVRKSDPAATWR*ASWWAF
Trigger: GAAGGCCCACCAGGATGCCCAGCGCCACGTAGCTGC...TGGGTCTGATTTTCTCACTGAACTCCACCGACCAACTGCCCTAAGCCCCCAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp AGAACACTATCCCAAGAAAGACCCTACGGAGGACCTCTGGAGGCGCAGGGTGCACCGGCAGCCACGCGCTaGATGTTCTCCACCGACGAG +
Preference number: 4 (lower is better)
Translates to: RTLSQERPYGGPLEAQGAPAATR*MFSTDE
Trigger: CTCGTCGGTGGAGAACATCCAGCGCGTGGCTGCCGG...TGCACCCTGCGCCTCCAGAGGTCCTCCGTAGGGTCTTTCTTGGGATAGTGTTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp AGAACACTATCCCAAGAAAGACCCTACGGAGGACCTCTGGAGGCGCAGGGTGCACAGCAACTCCATGAGTaGGGCCGAGGCCCCCTCTGC +
Preference number: 4 (lower is better)
Translates to: RTLSQERPYGGPLEAQGAQQLHE*GRGPLC
Trigger: GCAGAGGGGGCCTCGGCCCCACTCATGGAGTTGCTG...TGCACCCTGCGCCTCCAGAGGTCCTCCGTAGGGTCTTTCTTGGGATAGTGTTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp TCTGGAGGCGCAGGGTGCAGCAGGAAGTTACACCCCGGCTTCCCCAGCTCAGGCACATGGGGCGGTAGGTaGCATCCATGTCATCTCCAT +
Preference number: 4 (lower is better)
Translates to: SGGAGCSRKLHPGFPSSGTWGGR*HPCHLH
Trigger: ATGGAGATGACATGGATGCCACCTACCGCCCCATGT...GCCTGAGCTGGGGAAGCCGGGGTGTAACTTCCTGCTGCACCCTGCGCCTCCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp AGTGAGAAAATCAGACCCAGAGAAGGAACCAAAGCCCTTCCGGGCCCAGGCAGCCCTACGGAGGACCTCTaGAGGCGCAGGGTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: SEKIRPREGTKALPGPGSPTEDL*RRRVQQ
Trigger: CTGCTGCACCCTGCGCCTCCAGAGGTCCTCCGTAGG...GCTGCCTGGGCCCGGAAGGGCTTTGGTTCCTTCTCTGGGTCTGATTTTCTCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp CCCTGGGGGCTTAGGGCAGTTGGTCGGTGGAGTTCAGTGAGAAAATCAGACCCAGGGAGGCTGGAGGTTTaGAGGGGCGTTGCTGGGGGA +
Preference number: 4 (lower is better)
Translates to: PWGLRAVGRWSSVRKSDPGRLEV*RGVAGG
Trigger: TCCCCCAGCAACGCCCCTCCAAACCTCCAGCCTCCC...TGGGTCTGATTTTCTCACTGAACTCCACCGACCAACTGCCCTAAGCCCCCAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp AGAACACTATCCCAAGAAAGACCCTACGGAGGACCTCTGGAGGCGCAGGGTGCAGGGAGGCTGGAGGTTTaGAGGGGCGTTGCTGGGGGA +
Preference number: 4 (lower is better)
Translates to: RTLSQERPYGGPLEAQGAGRLEV*RGVAGG
Trigger: TCCCCCAGCAACGCCCCTCCAAACCTCCAGCCTCCC...TGCACCCTGCGCCTCCAGAGGTCCTCCGTAGGGTCTTTCTTGGGATAGTGTTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp GGCACTTTTCTGTCTTGCCCCATCGCCTGCACGGAGAGCCTCTCAGATGAGGAATTTGGGTCTCGAACCTaGGCCCTGGAGGCCCTGGGG +
Preference number: 4 (lower is better)
Translates to: GTFLSCPIACTESLSDEEFGSRT*ALEALG
Trigger: CCCCAGGGCCTCCAGGGCCCAGGTTCGAGACCCAAA...TTCCTCATCTGAGAGGCTCTCCGTGCAGGCGATGGGGCAAGACAGAAAAGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp AGAACACTATCCCAAGAAAGACCCTACGGAGGACCTCTGGAGGCGCAGGGTGCATTTGGGTCTCGAACCTaGGCCCTGGAGGCCCTGGGG +
Preference number: 4 (lower is better)
Translates to: RTLSQERPYGGPLEAQGAFGSRT*ALEALG
Trigger: CCCCAGGGCCTCCAGGGCCCAGGTTCGAGACCCAAA...TGCACCCTGCGCCTCCAGAGGTCCTCCGTAGGGTCTTTCTTGGGATAGTGTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp GGCACTTTTCTGTCTTGCCCCATCGCCTGCACGGAGAGCCTCTCAGATGAGGAAGGGTCAGGGGCTCGGTaGACCTGCATCCCCAGAAGC +
Preference number: 4 (lower is better)
Translates to: GTFLSCPIACTESLSDEEGSGAR*TCIPRS
Trigger: GCTTCTGGGGATGCAGGTCCACCGAGCCCCTGACCC...TTCCTCATCTGAGAGGCTCTCCGTGCAGGCGATGGGGCAAGACAGAAAAGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000393931.8
CDS-3UTR TCA 90 bp AGAACACTATCCCAAGAAAGACCCTACGGAGGACCTCTGGAGGCGCAGGGTGCAGGATGCCACCCGACTTaGAGATGGCGAGCAGCCCCT +
Preference number: 4 (lower is better)
Translates to: RTLSQERPYGGPLEAQGAGCHPT*RWRAAP
Trigger: AGGGGCTGCTCGCCATCTTCAAGTCGGGTGGCATCC...TGCACCCTGCGCCTCCAGAGGTCCTCCGTAGGGTCTTTCTTGGGATAGTGTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR TCA 90 bp AGTGAGAAAATCAGACCCAGAGAAGGAACCAAAGCCCTTCCGGGCCCAGGCAGCGCAGGCAGTCGGTGGTaGTGGCCAGGAACTTGGGGT +
Preference number: 4 (lower is better)
Translates to: SEKIRPREGTKALPGPGSAGSRW*WPGTWG
Trigger: ACCCCAAGTTCCTGGCCATCACCACCGACTGCCTGC...GCTGCCTGGGCCCGGAAGGGCTTTGGTTCCTTCTCTGGGTCTGATTTTCTCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR TCA 90 bp CTTCTGGAGCAGGTGACTCACTCCATATCTCCTCCCCATCTCCCCTGGACGGTCGCAGGATGGCATGGATaGGAGCCTCCACACCGCTGT +
Preference number: 4 (lower is better)
Translates to: LLEQVTHSISPPHLPWTVAGWHG*EPPHRC
Trigger: ACAGCGGTGTGGAGGCTCTCATCCATGCCATCCTGC...GACCGTCCAGGGGAGATGGGGAGGAGATATGGAGTGAGTCACCTGCTCCAGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR TCA 90 bp GTTTCAGCGGGGAGATGGGAGGGCCTCCAACAGAAGGAGGTTCTAGAGAGGAGGGCAGGATGGCATGGATaGGAGCCTCCACACCGCTGT +
Preference number: 4 (lower is better)
Translates to: VSAGRWEGLQQKEVLERRAGWHG*EPPHRC
Trigger: ACAGCGGTGTGGAGGCTCTCATCCATGCCATCCTGC...CCTCCTCTCTAGAACCTCCTTCTGTTGGAGGCCCTCCCATCTCCCCGCTGAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393931.8
CDS-3UTR TCA 90 bp CTTCTGGAGCAGGTGACTCACTCCATATCTCCTCCCCATCTCCCCTGGACGGTCAGACGGCAGGCTCCGTaGTGTCGTCCTTGTCACCAG +
Preference number: 4 (lower is better)
Translates to: LLEQVTHSISPPHLPWTVRRQAP*CRPCHQ
Trigger: CTGGTGACAAGGACGACATCACGGAGCCTGCCGTCT...GACCGTCCAGGGGAGATGGGGAGGAGATATGGAGTGAGTCACCTGCTCCAGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR TCA 90 bp TTCTGTCTTGCCCCATCGCCTGCACGGAGAGCCTCTCAGATGAGGAACCGCACTAGCCGATGGTTGCCTTaGCCAGTGGCCACTGGTTGG +
Preference number: 4 (lower is better)
Translates to: FCLAPSPARRASQMRNRTSRWLP*PVATGW
Trigger: CCAACCAGTGGCCACTGGTCAAGGCAACCATCGGCT...AGTGCGGTTCCTCATCTGAGAGGCTCTCCGTGCAGGCGATGGGGCAAGACAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310706.9
ENST00000393930.5
CDS-3UTR TCA 90 bp GAAAATCAGACCCAGAGAAGGAACCAAAGCCCTTCCGGGCCCAGGCAGCTGGAGAGCCGATGGTTGCCTTaGCCAGTGGCCACTGGTTGG +
Preference number: 4 (lower is better)
Translates to: ENQTQRRNQSPSGPRQLESRWLP*PVATGW
Trigger: CCAACCAGTGGCCACTGGTCAAGGCAACCATCGGCT...CTCCAGCTGCCTGGGCCCGGAAGGGCTTTGGTTCCTTCTCTGGGTCTGATTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR GCA 90 bp AGAACACTATCCCAAGAAAGACCCTACGGAGGACCTCTGGAGGCGCAGGGTGCAGCAGGATGCTGGTGGTaGAGCGGGCTGTGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: RTLSQERPYGGPLEAQGAAGCWW*SGLCPG
Trigger: ACCTGGACACAGCCCGCTGCACCACCAGCATCCTGC...TGCACCCTGCGCCTCCAGAGGTCCTCCGTAGGGTCTTTCTTGGGATAGTGTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR GCA 90 bp GAATGGGTACTTGAGTCTGAAGCTTTAGTGGCCAGGGCCACAGGGGCGGGGAGGTGGTGGGAGAGGTTGTaGAGGATGCTGGTGGTGCAG +
Preference number: 4 (lower is better)
Translates to: EWVLESEALVARATGAGRWWERL*RMLVVQ
Trigger: CTGCACCACCAGCATCCTGCACAACCTCTCCCACCA...CCTCCCCGCCCCTGTGGCCCTGGCCACTAAAGCTTCAGACTCAAGTACCCATTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR GCA 90 bp CATCCCCACCAAAGACACAAGAAGAAGGCAGGCCAGGGCACACCGTGCTTGGGGTGGTGGGAGAGGTTGTaGAGGATGCTGGTGGTGCAG +
Preference number: 4 (lower is better)
Translates to: HPHQRHKKKAGQGTPCLGWWERL*RMLVVQ
Trigger: CTGCACCACCAGCATCCTGCACAACCTCTCCCACCA...CCCCAAGCACGGTGTGCCCTGGCCTGCCTTCTTCTTGTGTCTTTGGTGGGGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393931.8
CDS-3UTR GCA 90 bp GAAAATCAGACCCAGAGAAGGAACCAAAGCCCTTCCGGGCCCAGGCAGCTGGAGGCTTGCTCTCCTGGTTaGCGTAGGCCAGGAGCTGCA +
Preference number: 4 (lower is better)
Translates to: ENQTQRRNQSPSGPRQLEACSPG*RRPGAA
Trigger: TGCAGCTCCTGGCCTACGGCAACCAGGAGAGCAAGC...CTCCAGCTGCCTGGGCCCGGAAGGGCTTTGGTTCCTTCTCTGGGTCTGATTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR GCA 90 bp GGCACTTTTCTGTCTTGCCCCATCGCCTGCACGGAGAGCCTCTCAGATGAGGAATGCTTGCCCAGGGCCTaGATCCCACCAGCCTCCACA +
Preference number: 4 (lower is better)
Translates to: GTFLSCPIACTESLSDEECLPRA*IPPAST
Trigger: TGTGGAGGCTGGTGGGATGCAGGCCCTGGGCAAGCA...TTCCTCATCTGAGAGGCTCTCCGTGCAGGCGATGGGGCAAGACAGAAAAGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR GCA 90 bp CCCTGGGGGCTTAGGGCAGTTGGTCGGTGGAGTTCAGTGAGAAAATCAGACCCATGCTTGCCCAGGGCCTaGATCCCACCAGCCTCCACA +
Preference number: 4 (lower is better)
Translates to: PWGLRAVGRWSSVRKSDPCLPRA*IPPAST
Trigger: TGTGGAGGCTGGTGGGATGCAGGCCCTGGGCAAGCA...TGGGTCTGATTTTCTCACTGAACTCCACCGACCAACTGCCCTAAGCCCCCAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR GCA 90 bp GGCACTTTTCTGTCTTGCCCCATCGCCTGCACGGAGAGCCTCTCAGATGAGGAATGCTGGTCAGGTGCTTaGCCAGGGCCTGCATCCCAC +
Preference number: 4 (lower is better)
Translates to: GTFLSCPIACTESLSDEECWSGA*PGPASH
Trigger: GTGGGATGCAGGCCCTGGGCAAGCACCTGACCAGCA...TTCCTCATCTGAGAGGCTCTCCGTGCAGGCGATGGGGCAAGACAGAAAAGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR GCA 90 bp GAACACTATCCCAAGAAAGACCCTACGGAGGACCTCTGGAGGCGCAGGGTGCAGTGTAGGGCTGCTGTGTaGCTGCAGCTACGTGGCGCT +
Preference number: 4 (lower is better)
Translates to: EHYPKKDPTEDLWRRRVQCRAAV*LQLRGA
Trigger: AGCGCCACGTAGCTGCAGGCACACAGCAGCCCTACA...CTGCACCCTGCGCCTCCAGAGGTCCTCCGTAGGGTCTTTCTTGGGATAGTGTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR GCA 90 bp GCGGGGAGATGGGAGGGCCTCCAACAGAAGGAGGTTCTAGAGAGGAGGAAAAGCCCCTCGTTGCGGGAGTaGAGCAACTCCATGAGTGGG +
Preference number: 4 (lower is better)
Translates to: AGRWEGLQQKEVLERRKSPSLRE*SNSMSG
Trigger: CCCACTCATGGAGTTGCTGCACTCCCGCAACGAGGG...GCTTTTCCTCCTCTCTAGAACCTCCTTCTGTTGGAGGCCCTCCCATCTCCCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393931.8
CDS-3UTR GCA 90 bp CTTCTGGAGCAGGTGACTCACTCCATATCTCCTCCCCATCTCCCCTGGACGGTCTCTGGAGGCGCAGGGTaGAGCAGGAAGTTACACCCC +
Preference number: 4 (lower is better)
Translates to: LLEQVTHSISPPHLPWTVSGGAG*SRKLHP
Trigger: GGGGTGTAACTTCCTGCTGCACCCTGCGCCTCCAGA...GACCGTCCAGGGGAGATGGGGAGGAGATATGGAGTGAGTCACCTGCTCCAGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR GCA 90 bp GAAAATCAGACCCAGAGAAGGAACCAAAGCCCTTCCGGGCCCAGGCAGCTGGAGTCTGGAGGCGCAGGGTaGAGCAGGAAGTTACACCCC +
Preference number: 4 (lower is better)
Translates to: ENQTQRRNQSPSGPRQLESGGAG*SRKLHP
Trigger: GGGGTGTAACTTCCTGCTGCACCCTGCGCCTCCAGA...CTCCAGCTGCCTGGGCCCGGAAGGGCTTTGGTTCCTTCTCTGGGTCTGATTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp CGTTGCTGGGGGAAAACAGAATGGGTACTTGAGTCTGAAGCTTTAGTGGCCAGGGAACTGAGCTCGGCGTaGTCGGGCGGCGGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: RCWGKTEWVLESEALVARELSSA*SGGGCS
Trigger: GGAGCAGCCGCCGCCCGACCACGCCGAGCTCAGTTC...CCTGGCCACTAAAGCTTCAGACTCAAGTACCCATTCTGTTTTCCCCCAGCAACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310706.9
ENST00000393931.8
CDS-3UTR CCA 90 bp TTCTGTCTTGCCCCATCGCCTGCACGGAGAGCCTCTCAGATGAGGAACCGCACTTTCTTGAGCGTGTACTaGCGCCCGCAGGCCTCATCC +
Preference number: 4 (lower is better)
Translates to: FCLAPSPARRASQMRNRTFLSVY*RPQASS
Trigger: GGATGAGGCCTGCGGGCGCCAGTACACGCTCAAGAA...AGTGCGGTTCCTCATCTGAGAGGCTCTCCGTGCAGGCGATGGGGCAAGACAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310706.9
ENST00000393930.5
CDS-3UTR CCA 90 bp AAAACAGAATGGGTACTTGAGTCTGAAGCTTTAGTGGCCAGGGCCACAGGGGCGGCCTGCCCCTCCACCTaGGTGGCCAGCAGAAGCGAG +
Preference number: 4 (lower is better)
Translates to: KTEWVLESEALVARATGAACPST*VASRSE
Trigger: CTCGCTTCTGCTGGCCACCCAGGTGGAGGGGCAGGC...CGCCCCTGTGGCCCTGGCCACTAAAGCTTCAGACTCAAGTACCCATTCTGTTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp GTTTCAGCGGGGAGATGGGAGGGCCTCCAACAGAAGGAGGTTCTAGAGAGGAGGTGTGCAGGATGCTGGTaGTGCAGCGGGCTGTGTCCA +
Preference number: 4 (lower is better)
Translates to: VSAGRWEGLQQKEVLERRCAGCW*CSGLCP
Trigger: TGGACACAGCCCGCTGCACCACCAGCATCCTGCACA...CCTCCTCTCTAGAACCTCCTTCTGTTGGAGGCCCTCCCATCTCCCCGCTGAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393931.8
CDS-3UTR CCA 90 bp GAAAATCAGACCCAGAGAAGGAACCAAAGCCCTTCCGGGCCCAGGCAGCTGGAGGGTTGTGCAGGATGCTaGTGGTGCAGCGGGCTGTGT +
Preference number: 4 (lower is better)
Translates to: ENQTQRRNQSPSGPRQLEGCAGC*WCSGLC
Trigger: ACACAGCCCGCTGCACCACCAGCATCCTGCACAACC...CTCCAGCTGCCTGGGCCCGGAAGGGCTTTGGTTCCTTCTCTGGGTCTGATTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp AGTTCAGTGAGAAAATCAGACCCAGAGAAGGAACCAAAGCCCTTCCGGGCCCAGGGCGGGGGCTGTTGCTaGTCAGGTGCTTGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: SSVRKSDPEKEPKPFRAQGGGCC*SGACPG
Trigger: CCCTGGGCAAGCACCTGACCAGCAACAGCCCCCGCC...CTGGGCCCGGAAGGGCTTTGGTTCCTTCTCTGGGTCTGATTTTCTCACTGAACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp AAAACAGAATGGGTACTTGAGTCTGAAGCTTTAGTGGCCAGGGCCACAGGGGCGGGCGGGGGCTGTTGCTaGTCAGGTGCTTGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: KTEWVLESEALVARATGAGGGCC*SGACPG
Trigger: CCCTGGGCAAGCACCTGACCAGCAACAGCCCCCGCC...CGCCCCTGTGGCCCTGGCCACTAAAGCTTCAGACTCAAGTACCCATTCTGTTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp GGGAAAACAGAATGGGTACTTGAGTCTGAAGCTTTAGTGGCCAGGGCCACAGGGTCCTGCAGCGGGGCATaGTTGGCTGGGCACAGGGCC +
Preference number: 4 (lower is better)
Translates to: GKTEWVLESEALVARATGSCSGA*LAGHRA
Trigger: GGCCCTGTGCCCAGCCAACCATGCCCCGCTGCAGGA...CCCTGTGGCCCTGGCCACTAAAGCTTCAGACTCAAGTACCCATTCTGTTTTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp AGTGAGAAAATCAGACCCAGAGAAGGAACCAAAGCCCTTCCGGGCCCAGGCAGCGCCTTCACCAGCAGTTaGACGAGGCGGGGGATGACC +
Preference number: 4 (lower is better)
Translates to: SEKIRPREGTKALPGPGSAFTSS*TRRGMT
Trigger: GGTCATCCCCCGCCTCGTCCAACTGCTGGTGAAGGC...GCTGCCTGGGCCCGGAAGGGCTTTGGTTCCTTCTCTGGGTCTGATTTTCTCACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp AGAACACTATCCCAAGAAAGACCCTACGGAGGACCTCTGGAGGCGCAGGGTGCACGCTGGGCATCCTGGTaGGCCTTCACCAGCAGTTGG +
Preference number: 4 (lower is better)
Translates to: RTLSQERPYGGPLEAQGARWASW*AFTSSW
Trigger: CCAACTGCTGGTGAAGGCCCACCAGGATGCCCAGCG...TGCACCCTGCGCCTCCAGAGGTCCTCCGTAGGGTCTTTCTTGGGATAGTGTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp CCCTGGGGGCTTAGGGCAGTTGGTCGGTGGAGTTCAGTGAGAAAATCAGACCCACCCCCTCTGCATCAATaGCGTCGGCCGCCTCCTTGT +
Preference number: 4 (lower is better)
Translates to: PWGLRAVGRWSSVRKSDPPPLHQ*RRPPPC
Trigger: ACAAGGAGGCGGCCGACGCCATTGATGCAGAGGGGG...TGGGTCTGATTTTCTCACTGAACTCCACCGACCAACTGCCCTAAGCCCCCAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp AAAACAGAATGGGTACTTGAGTCTGAAGCTTTAGTGGCCAGGGCCACAGGGGCGCGGCAGCAGCGTAGGTaGCAGTGCCCTCGTTGCGGG +
Preference number: 4 (lower is better)
Translates to: KTEWVLESEALVARATGARQQRR*QCPRCG
Trigger: CCCGCAACGAGGGCACTGCCACCTACGCTGCTGCCG...CGCCCCTGTGGCCCTGGCCACTAAAGCTTCAGACTCAAGTACCCATTCTGTTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp GGGAAAACAGAATGGGTACTTGAGTCTGAAGCTTTAGTGGCCAGGGCCACAGGGGGGCCCTGGAGGCCCTaGGGGCTTAGGGCAGTTGGT +
Preference number: 4 (lower is better)
Translates to: GKTEWVLESEALVARATGGPWRP*GLRAVG
Trigger: ACCAACTGCCCTAAGCCCCCAGGGCCTCCAGGGCCC...CCCTGTGGCCCTGGCCACTAAAGCTTCAGACTCAAGTACCCATTCTGTTTTCCC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp AGTGAGAAAATCAGACCCAGAGAAGGAACCAAAGCCCTTCCGGGCCCAGGCAGCGCTAGGGCAGCTGTGTaGGTGGGACAGGGGTGTGAG +
Preference number: 4 (lower is better)
Translates to: SEKIRPREGTKALPGPGSARAAV*VGQGCE
Trigger: CTCACACCCCTGTCCCACCCACACAGCTGCCCTAGC...GCTGCCTGGGCCCGGAAGGGCTTTGGTTCCTTCTCTGGGTCTGATTTTCTCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR TCA 90 bp GAACACTATCCCAAGAAAGACCCTACGGAGGACCTCTGGAGGCGCAGGGTGCAGAAGTGGTGGTTTTCTTaGGCGTGTACTGGCGCCCGC +
Preference number: 4 (lower is better)
Translates to: EHYPKKDPTEDLWRRRVQKWWFS*ACTGAR
Trigger: GCGGGCGCCAGTACACGCTCAAGAAAACCACCACTT...CTGCACCCTGCGCCTCCAGAGGTCCTCCGTAGGGTCTTTCTTGGGATAGTGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR TCA 90 bp AAAACAGAATGGGTACTTGAGTCTGAAGCTTTAGTGGCCAGGGCCACAGGGGCGCGAGCTGTCCTCGCCTaGCACACCAGGGCACATGGC +
Preference number: 4 (lower is better)
Translates to: KTEWVLESEALVARATGARAVLA*HTRAHG
Trigger: GCCATGTGCCCTGGTGTGTCAGGCGAGGACAGCTCG...CGCCCCTGTGGCCCTGGCCACTAAAGCTTCAGACTCAAGTACCCATTCTGTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR TCA 90 bp GGGAAAACAGAATGGGTACTTGAGTCTGAAGCTTTAGTGGCCAGGGCCACAGGGCGAGCTGTCCTCGCCTaGCACACCAGGGCACATGGC +
Preference number: 4 (lower is better)
Translates to: GKTEWVLESEALVARATGRAVLA*HTRAHG
Trigger: GCCATGTGCCCTGGTGTGTCAGGCGAGGACAGCTCG...CCCTGTGGCCCTGGCCACTAAAGCTTCAGACTCAAGTACCCATTCTGTTTTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR TCA 90 bp AAAACAGAATGGGTACTTGAGTCTGAAGCTTTAGTGGCCAGGGCCACAGGGGCGGCACAATGGCCGACTTaGGCAGCTGGGACGGCTCGG +
Preference number: 4 (lower is better)
Translates to: KTEWVLESEALVARATGAAQWPT*AAGTAR
Trigger: CCGAGCCGTCCCAGCTGCTCAAGTCGGCCATTGTGC...CGCCCCTGTGGCCCTGGCCACTAAAGCTTCAGACTCAAGTACCCATTCTGTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR TCA 90 bp GGGAAAACAGAATGGGTACTTGAGTCTGAAGCTTTAGTGGCCAGGGCCACAGGGGCACAATGGCCGACTTaGGCAGCTGGGACGGCTCGG +
Preference number: 4 (lower is better)
Translates to: GKTEWVLESEALVARATGAQWPT*AAGTAR
Trigger: CCGAGCCGTCCCAGCTGCTCAAGTCGGCCATTGTGC...CCCTGTGGCCCTGGCCACTAAAGCTTCAGACTCAAGTACCCATTCTGTTTTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR TCA 90 bp CTTCTGGAGCAGGTGACTCACTCCATATCTCCTCCCCATCTCCCCTGGACGGTCGGTTGTGCAGCGTGGTaGTGGCATAGAACAGGACCG +
Preference number: 4 (lower is better)
Translates to: LLEQVTHSISPPHLPWTVGCAAW*WHRTGP
Trigger: CGGTCCTGTTCTATGCCATCACCACGCTGCACAACC...GACCGTCCAGGGGAGATGGGGAGGAGATATGGAGTGAGTCACCTGCTCCAGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR TCA 90 bp GAACACTATCCCAAGAAAGACCCTACGGAGGACCTCTGGAGGCGCAGGGTGCAGGGTTGTGCAGCGTGGTaGTGGCATAGAACAGGACCG +
Preference number: 4 (lower is better)
Translates to: EHYPKKDPTEDLWRRRVQGCAAW*WHRTGP
Trigger: CGGTCCTGTTCTATGCCATCACCACGCTGCACAACC...CTGCACCCTGCGCCTCCAGAGGTCCTCCGTAGGGTCTTTCTTGGGATAGTGTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR TCA 90 bp TGGAGGCCCTGGGGGCTTAGGGCAGTTGGTCGGTGGAGTTCAGTGAGAAAATCACTTGGTGGCCACATCTaGGAGGTTGCGCAGGGTCCA +
Preference number: 4 (lower is better)
Translates to: WRPWGLRAVGRWSSVRKSLGGHI*EVAQGP
Trigger: TGGACCCTGCGCAACCTCTCAGATGTGGCCACCAAG...TGATTTTCTCACTGAACTCCACCGACCAACTGCCCTAAGCCCCCAGGGCCTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR TCA 90 bp GGCACTTTTCTGTCTTGCCCCATCGCCTGCACGGAGAGCCTCTCAGATGAGGAAAGACGGCAGGCTCCGTaGTGTCGTCCTTGTCACCAG +
Preference number: 4 (lower is better)
Translates to: GTFLSCPIACTESLSDEERRQAP*CRPCHQ
Trigger: CTGGTGACAAGGACGACATCACGGAGCCTGCCGTCT...TTCCTCATCTGAGAGGCTCTCCGTGCAGGCGATGGGGCAAGACAGAAAAGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR TCA 90 bp GAAAATCAGACCCAGAGAAGGAACCAAAGCCCTTCCGGGCCCAGGCAGCTGGAGACTGGTTGGGCTGGTTaGGCAGCTTCACGATGGCTG +
Preference number: 4 (lower is better)
Translates to: ENQTQRRNQSPSGPRQLETGWAG*AASRWL
Trigger: CAGCCATCGTGAAGCTGCTCAACCAGCCCAACCAGT...CTCCAGCTGCCTGGGCCCGGAAGGGCTTTGGTTCCTTCTCTGGGTCTGATTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR TCA 90 bp CCCTGGGGGCTTAGGGCAGTTGGTCGGTGGAGTTCAGTGAGAAAATCAGACCCAAGCCGATGGTTGCCTTaGCCAGTGGCCACTGGTTGG +
Preference number: 4 (lower is better)
Translates to: PWGLRAVGRWSSVRKSDPSRWLP*PVATGW
Trigger: CCAACCAGTGGCCACTGGTCAAGGCAACCATCGGCT...TGGGTCTGATTTTCTCACTGAACTCCACCGACCAACTGCCCTAAGCCCCCAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR TCA 90 bp GAATGGGTACTTGAGTCTGAAGCTTTAGTGGCCAGGGCCACAGGGGCGGGGAGGACAGGGCCAGATTCCTaGTCAAGCCGATGGTTGCCT +
Preference number: 4 (lower is better)
Translates to: EWVLESEALVARATGAGRTGPDS*SSRWLP
Trigger: AGGCAACCATCGGCTTGATCAGGAATCTGGCCCTGT...CCTCCCCGCCCCTGTGGCCCTGGCCACTAAAGCTTCAGACTCAAGTACCCATTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR GCA 90 bp AGAACACTATCCCAAGAAAGACCCTACGGAGGACCTCTGGAGGCGCAGGGTGCAAGAGGTTGTGCAGGATaGTGGTGGTGCAGCGGGCTG +
Preference number: 4 (lower is better)
Translates to: RTLSQERPYGGPLEAQGARGCAG*WWCSGL
Trigger: CAGCCCGCTGCACCACCAGCATCCTGCACAACCTCT...TGCACCCTGCGCCTCCAGAGGTCCTCCGTAGGGTCTTTCTTGGGATAGTGTTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR GCA 90 bp CCCTGGGGGCTTAGGGCAGTTGGTCGGTGGAGTTCAGTGAGAAAATCAGACCCAAGAGGTTGTGCAGGATaGTGGTGGTGCAGCGGGCTG +
Preference number: 4 (lower is better)
Translates to: PWGLRAVGRWSSVRKSDPRGCAG*WWCSGL
Trigger: CAGCCCGCTGCACCACCAGCATCCTGCACAACCTCT...TGGGTCTGATTTTCTCACTGAACTCCACCGACCAACTGCCCTAAGCCCCCAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR GCA 90 bp GAAAATCAGACCCAGAGAAGGAACCAAAGCCCTTCCGGGCCCAGGCAGCTGGAGTGGTGGGAGAGGTTGTaGAGGATGCTGGTGGTGCAG +
Preference number: 4 (lower is better)
Translates to: ENQTQRRNQSPSGPRQLEWWERL*RMLVVQ
Trigger: CTGCACCACCAGCATCCTGCACAACCTCTCCCACCA...CTCCAGCTGCCTGGGCCCGGAAGGGCTTTGGTTCCTTCTCTGGGTCTGATTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR GCA 90 bp AGTTCAGTGAGAAAATCAGACCCAGAGAAGGAACCAAAGCCCTTCCGGGCCCAGAGGGGCACCATCTTTTaGAGCCCGTCGGCCAGGCGC +
Preference number: 4 (lower is better)
Translates to: SSVRKSDPEKEPKPFRAQRGTIF*SPSARR
Trigger: GCGCCTGGCCGACGGGCTGCAAAAGATGGTGCCCCT...CTGGGCCCGGAAGGGCTTTGGTTCCTTCTCTGGGTCTGATTTTCTCACTGAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR GCA 90 bp GGCACTTTTCTGTCTTGCCCCATCGCCTGCACGGAGAGCCTCTCAGATGAGGAACTGTTGCTGGTCAGGTaGTTGCCCAGGGCCTGCATC +
Preference number: 4 (lower is better)
Translates to: GTFLSCPIACTESLSDEELLLVR*LPRACI
Trigger: GATGCAGGCCCTGGGCAAGCACCTGACCAGCAACAG...TTCCTCATCTGAGAGGCTCTCCGTGCAGGCGATGGGGCAAGACAGAAAAGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR GCA 90 bp AGTGAGAAAATCAGACCCAGAGAAGGAACCAAAGCCCTTCCGGGCCCAGGCAGCCTGTTGCTGGTCAGGTaGTTGCCCAGGGCCTGCATC +
Preference number: 4 (lower is better)
Translates to: SEKIRPREGTKALPGPGSLLLVR*LPRACI
Trigger: GATGCAGGCCCTGGGCAAGCACCTGACCAGCAACAG...GCTGCCTGGGCCCGGAAGGGCTTTGGTTCCTTCTCTGGGTCTGATTTTCTCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR GCA 90 bp CCATCGCCTGCACGGAGAGCCTCTCAGATGAGGAACCGCACTGGGGCCAGGCCGTGTTCTTGCTGTTGTTaGATGTCAGGTTGGAGAGTG +
Preference number: 4 (lower is better)
Translates to: PSPARRASQMRNRTGARPCSCCC*MSGWRV
Trigger: CACTCTCCAACCTGACATGCAACAACAGCAAGAACA...CGGCCTGGCCCCAGTGCGGTTCCTCATCTGAGAGGCTCTCCGTGCAGGCGATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310706.9
ENST00000393930.5
CDS-3UTR GCA 90 bp GAACACTATCCCAAGAAAGACCCTACGGAGGACCTCTGGAGGCGCAGGGTGCAGTGTGCAGTGCTCCGGTaGAGCCCTCCACAATCTCCT +
Preference number: 4 (lower is better)
Translates to: EHYPKKDPTEDLWRRRVQCAVLR*SPPQSP
Trigger: AGGAGATTGTGGAGGGCTGCACCGGAGCACTGCACA...CTGCACCCTGCGCCTCCAGAGGTCCTCCGTAGGGTCTTTCTTGGGATAGTGTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR GCA 90 bp CGTTGCTGGGGGAAAACAGAATGGGTACTTGAGTCTGAAGCTTTAGTGGCCAGGTCCCGGGCGAGGATGTaGAGTGCTCCGGTGCAGCCC +
Preference number: 4 (lower is better)
Translates to: RCWGKTEWVLESEALVARSRARM*SAPVQP
Trigger: GGGCTGCACCGGAGCACTGCACATCCTCGCCCGGGA...CCTGGCCACTAAAGCTTCAGACTCAAGTACCCATTCTGTTTTCCCCCAGCAACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR GCA 90 bp TGGAGGCCCTGGGGGCTTAGGGCAGTTGGTCGGTGGAGTTCAGTGAGAAAATCACCCTCGTTGCGGGAGTaGAGCAACTCCATGAGTGGG +
Preference number: 4 (lower is better)
Translates to: WRPWGLRAVGRWSSVRKSPSLRE*SNSMSG
Trigger: CCCACTCATGGAGTTGCTGCACTCCCGCAACGAGGG...TGATTTTCTCACTGAACTCCACCGACCAACTGCCCTAAGCCCCCAGGGCCTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR GCA 90 bp TTCTGTCTTGCCCCATCGCCTGCACGGAGAGCCTCTCAGATGAGGAACCGCACTTCTTGTCCTCGGAGATaGGGAACAGGACGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: FCLAPSPARRASQMRNRTSCPRR*GTGRQQ
Trigger: CTGCTGCCGTCCTGTTCCGCATCTCCGAGGACAAGA...AGTGCGGTTCCTCATCTGAGAGGCTCTCCGTGCAGGCGATGGGGCAAGACAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310706.9
ENST00000393930.5
CDS-3UTR GCA 90 bp AAGAGAAAGCCCCTCACCACACACCAGAGGGGTCAGCCAAGAGCACTTCTCGGGTCTTGTCCTCGGAGATaGGGAACAGGACGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: KRKPLTTHQRGQPRALLGSCPRR*GTGRQQ
Trigger: CTGCTGCCGTCCTGTTCCGCATCTCCGAGGACAAGA...CCCGAGAAGTGCTCTTGGCTGACCCCTCTGGTGTGTGGTGAGGGGCTTTCTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR GCA 90 bp AAGAGAAAGCCCCTCACCACACACCAGAGGGGTCAGCCAAGAGCACTTCTCGGGCAGGCAGCCGGGTCATaGTTGAAGAGGGAGTTGGTG +
Preference number: 4 (lower is better)
Translates to: KRKPLTTHQRGQPRALLGQAAGS*LKRELV
Trigger: CACCAACTCCCTCTTCAAGCATGACCCGGCTGCCTG...CCCGAGAAGTGCTCTTGGCTGACCCCTCTGGTGTGTGGTGAGGGGCTTTCTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR GCA 90 bp GAACACTATCCCAAGAAAGACCCTACGGAGGACCTCTGGAGGCGCAGGGTGCAGTCTTGCCCCATCGCCTaGACGGAGAGCCTCTCAGAT +
Preference number: 4 (lower is better)
Translates to: EHYPKKDPTEDLWRRRVQSCPIA*TESLSD
Trigger: ATCTGAGAGGCTCTCCGTGCAGGCGATGGGGCAAGA...CTGCACCCTGCGCCTCCAGAGGTCCTCCGTAGGGTCTTTCTTGGGATAGTGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR GCA 90 bp GAAAATCAGACCCAGAGAAGGAACCAAAGCCCTTCCGGGCCCAGGCAGCTGGAGTCTTGCCCCATCGCCTaGACGGAGAGCCTCTCAGAT +
Preference number: 4 (lower is better)
Translates to: ENQTQRRNQSPSGPRQLESCPIA*TESLSD
Trigger: ATCTGAGAGGCTCTCCGTGCAGGCGATGGGGCAAGA...CTCCAGCTGCCTGGGCCCGGAAGGGCTTTGGTTCCTTCTCTGGGTCTGATTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR GCA 90 bp GAAAATCAGACCCAGAGAAGGAACCAAAGCCCTTCCGGGCCCAGGCAGCTGGAGGGCACTTTTCTGTCTTaGCCCATCGCCTGCACGGAG +
Preference number: 4 (lower is better)
Translates to: ENQTQRRNQSPSGPRQLEGTFLS*PIACTE
Trigger: CTCCGTGCAGGCGATGGGGCAAGACAGAAAAGTGCC...CTCCAGCTGCCTGGGCCCGGAAGGGCTTTGGTTCCTTCTCTGGGTCTGATTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR GCA 90 bp GTTTCAGCGGGGAGATGGGAGGGCCTCCAACAGAAGGAGGTTCTAGAGAGGAGGGGCACTTTTCTGTCTTaGCCCATCGCCTGCACGGAG +
Preference number: 4 (lower is better)
Translates to: VSAGRWEGLQQKEVLERRGTFLS*PIACTE
Trigger: CTCCGTGCAGGCGATGGGGCAAGACAGAAAAGTGCC...CCTCCTCTCTAGAACCTCCTTCTGTTGGAGGCCCTCCCATCTCCCCGCTGAAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393931.8
CDS-3UTR GCA 90 bp AGAACACTATCCCAAGAAAGACCCTACGGAGGACCTCTGGAGGCGCAGGGTGCATCTGGAGGCGCAGGGTaGAGCAGGAAGTTACACCCC +
Preference number: 4 (lower is better)
Translates to: RTLSQERPYGGPLEAQGASGGAG*SRKLHP
Trigger: GGGGTGTAACTTCCTGCTGCACCCTGCGCCTCCAGA...TGCACCCTGCGCCTCCAGAGGTCCTCCGTAGGGTCTTTCTTGGGATAGTGTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR GCA 90 bp TCTGGAGGCGCAGGGTGCAGCAGGAAGTTACACCCCGGCTTCCCCAGCTCAGGCAATAATAAAACACTCTaGTTGGACCTCCCCCAGCCC +
Preference number: 4 (lower is better)
Translates to: SGGAGCSRKLHPGFPSSGNNKTL*LDLPQP
Trigger: GGGCTGGGGGAGGTCCAAGCAGAGTGTTTTATTATT...GCCTGAGCTGGGGAAGCCGGGGTGTAACTTCCTGCTGCACCCTGCGCCTCCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp AGTGAGAAAATCAGACCCAGAGAAGGAACCAAAGCCCTTCCGGGCCCAGGCAGCTTCTTGAGCGTGTACTaGCGCCCGCAGGCCTCATCC +
Preference number: 4 (lower is better)
Translates to: SEKIRPREGTKALPGPGSFLSVY*RPQASS
Trigger: GGATGAGGCCTGCGGGCGCCAGTACACGCTCAAGAA...GCTGCCTGGGCCCGGAAGGGCTTTGGTTCCTTCTCTGGGTCTGATTTTCTCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp GGGAAAACAGAATGGGTACTTGAGTCTGAAGCTTTAGTGGCCAGGGCCACAGGGCCAGATCACCTTGGCTaGGGGGCACCCCCTGGGTGT +
Preference number: 4 (lower is better)
Translates to: GKTEWVLESEALVARATGPDHLG*GAPPGC
Trigger: ACACCCAGGGGGTGCCCCCCAGCCAAGGTGATCTGG...CCCTGTGGCCCTGGCCACTAAAGCTTCAGACTCAAGTACCCATTCTGTTTTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp GAAAATCAGACCCAGAGAAGGAACCAAAGCCCTTCCGGGCCCAGGCAGCTGGAGGCACCCGTTTGGCCCTaGCTGTTGTGGACATCTGGT +
Preference number: 4 (lower is better)
Translates to: ENQTQRRNQSPSGPRQLEAPVWP*LLWTSG
Trigger: ACCAGATGTCCACAACAGCCAGGGCCAAACGGGTGC...CTCCAGCTGCCTGGGCCCGGAAGGGCTTTGGTTCCTTCTCTGGGTCTGATTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp GAACACTATCCCAAGAAAGACCCTACGGAGGACCTCTGGAGGCGCAGGGTGCAGGCACCCGTTTGGCCCTaGCTGTTGTGGACATCTGGT +
Preference number: 4 (lower is better)
Translates to: EHYPKKDPTEDLWRRRVQAPVWP*LLWTSG
Trigger: ACCAGATGTCCACAACAGCCAGGGCCAAACGGGTGC...CTGCACCCTGCGCCTCCAGAGGTCCTCCGTAGGGTCTTTCTTGGGATAGTGTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp AGTTCAGTGAGAAAATCAGACCCAGAGAAGGAACCAAAGCCCTTCCGGGCCCAGGCCCCTCCACCTGGGTaGCCAGCAGAAGCGAGCTGT +
Preference number: 4 (lower is better)
Translates to: SSVRKSDPEKEPKPFRAQAPPPG*PAEASC
Trigger: ACAGCTCGCTTCTGCTGGCCACCCAGGTGGAGGGGC...CTGGGCCCGGAAGGGCTTTGGTTCCTTCTCTGGGTCTGATTTTCTCACTGAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp GGGAAAACAGAATGGGTACTTGAGTCTGAAGCTTTAGTGGCCAGGGCCACAGGGCCAGTCGCTGCAGGTTaGTGGCCTGCCCCTCCACCT +
Preference number: 4 (lower is better)
Translates to: GKTEWVLESEALVARATGPVAAG*WPAPPP
Trigger: AGGTGGAGGGGCAGGCCACCAACCTGCAGCGACTGG...CCCTGTGGCCCTGGCCACTAAAGCTTCAGACTCAAGTACCCATTCTGTTTTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp GGCACTTTTCTGTCTTGCCCCATCGCCTGCACGGAGAGCCTCTCAGATGAGGAACAATCATGGCCGCCTTaGTCACCACCACCGGGTCCT +
Preference number: 4 (lower is better)
Translates to: GTFLSCPIACTESLSDEEQSWPP*SPPPGP
Trigger: AGGACCCGGTGGTGGTGACCAAGGCGGCCATGATTG...TTCCTCATCTGAGAGGCTCTCCGTGCAGGCGATGGGGCAAGACAGAAAAGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp TGGAGGCCCTGGGGGCTTAGGGCAGTTGGTCGGTGGAGTTCAGTGAGAAAATCACAATCATGGCCGCCTTaGTCACCACCACCGGGTCCT +
Preference number: 4 (lower is better)
Translates to: WRPWGLRAVGRWSSVRKSQSWPP*SPPPGP
Trigger: AGGACCCGGTGGTGGTGACCAAGGCGGCCATGATTG...TGATTTTCTCACTGAACTCCACCGACCAACTGCCCTAAGCCCCCAGGGCCTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp GTTTCAGCGGGGAGATGGGAGGGCCTCCAACAGAAGGAGGTTCTAGAGAGGAGGCGCTGGTATTCTGCATaGTACGCACGACAGCGGCCA +
Preference number: 4 (lower is better)
Translates to: VSAGRWEGLQQKEVLERRRWYSA*YARQRP
Trigger: TGGCCGCTGTCGTGCGTACCATGCAGAATACCAGCG...CCTCCTCTCTAGAACCTCCTTCTGTTGGAGGCCCTCCCATCTCCCCGCTGAAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393931.8
CDS-3UTR CCA 90 bp TGGAGGCCCTGGGGGCTTAGGGCAGTTGGTCGGTGGAGTTCAGTGAGAAAATCAGGTTGTGCAGGATGCTaGTGGTGCAGCGGGCTGTGT +
Preference number: 4 (lower is better)
Translates to: WRPWGLRAVGRWSSVRKSGCAGC*WCSGLC
Trigger: ACACAGCCCGCTGCACCACCAGCATCCTGCACAACC...TGATTTTCTCACTGAACTCCACCGACCAACTGCCCTAAGCCCCCAGGGCCTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp AAAACAGAATGGGTACTTGAGTCTGAAGCTTTAGTGGCCAGGGCCACAGGGGCGAGCAGCCCCTCCCGGTaGTGGGAGAGGTTGTGCAGG +
Preference number: 4 (lower is better)
Translates to: KTEWVLESEALVARATGASSPSR*WERLCR
Trigger: CCTGCACAACCTCTCCCACCACCGGGAGGGGCTGCT...CGCCCCTGTGGCCCTGGCCACTAAAGCTTCAGACTCAAGTACCCATTCTGTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp CTTCTGGAGCAGGTGACTCACTCCATATCTCCTCCCCATCTCCCCTGGACGGTCATCTTGGCGCCCTCCTaGTACAGGAGCAGGTTGTGC +
Preference number: 4 (lower is better)
Translates to: LLEQVTHSISPPHLPWTVILAPS*YRSRLC
Trigger: GCACAACCTGCTCCTGTACCAGGAGGGCGCCAAGAT...GACCGTCCAGGGGAGATGGGGAGGAGATATGGAGTGAGTCACCTGCTCCAGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp GAACACTATCCCAAGAAAGACCCTACGGAGGACCTCTGGAGGCGCAGGGTGCAGATCTTGGCGCCCTCCTaGTACAGGAGCAGGTTGTGC +
Preference number: 4 (lower is better)
Translates to: EHYPKKDPTEDLWRRRVQILAPS*YRSRLC
Trigger: GCACAACCTGCTCCTGTACCAGGAGGGCGCCAAGAT...CTGCACCCTGCGCCTCCAGAGGTCCTCCGTAGGGTCTTTCTTGGGATAGTGTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp AGAACACTATCCCAAGAAAGACCCTACGGAGGACCTCTGGAGGCGCAGGGTGCAGGCCCTCCTGCTTGGTaGCCACATCTGAGAGGTTGC +
Preference number: 4 (lower is better)
Translates to: RTLSQERPYGGPLEAQGAGPPAW*PHLRGC
Trigger: GCAACCTCTCAGATGTGGCCACCAAGCAGGAGGGCC...TGCACCCTGCGCCTCCAGAGGTCCTCCGTAGGGTCTTTCTTGGGATAGTGTTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp TGGAGGCCCTGGGGGCTTAGGGCAGTTGGTCGGTGGAGTTCAGTGAGAAAATCACCAGGCCCTCCTGCTTaGTGGCCACATCTGAGAGGT +
Preference number: 4 (lower is better)
Translates to: WRPWGLRAVGRWSSVRKSPGPPA*WPHLRG
Trigger: ACCTCTCAGATGTGGCCACCAAGCAGGAGGGCCTGG...TGATTTTCTCACTGAACTCCACCGACCAACTGCCCTAAGCCCCCAGGGCCTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp TGGAGGCCCTGGGGGCTTAGGGCAGTTGGTCGGTGGAGTTCAGTGAGAAAATCAGCACGCAGGATGGCATaGATGAGAGCCTCCACACCG +
Preference number: 4 (lower is better)
Translates to: WRPWGLRAVGRWSSVRKSARRMA*MRASTP
Trigger: CGGTGTGGAGGCTCTCATCCATGCCATCCTGCGTGC...TGATTTTCTCACTGAACTCCACCGACCAACTGCCCTAAGCCCCCAGGGCCTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp AGAACACTATCCCAAGAAAGACCCTACGGAGGACCTCTGGAGGCGCAGGGTGCAGCACGCAGGATGGCATaGATGAGAGCCTCCACACCG +
Preference number: 4 (lower is better)
Translates to: RTLSQERPYGGPLEAQGAARRMA*MRASTP
Trigger: CGGTGTGGAGGCTCTCATCCATGCCATCCTGCGTGC...TGCACCCTGCGCCTCCAGAGGTCCTCCGTAGGGTCTTTCTTGGGATAGTGTTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp AAGAGAAAGCCCCTCACCACACACCAGAGGGGTCAGCCAAGAGCACTTCTCGGGGGCCACTGGTTGGGCTaGTTGAGCAGCTTCACGATG +
Preference number: 4 (lower is better)
Translates to: KRKPLTTHQRGQPRALLGGHWLG*LSSFTM
Trigger: CATCGTGAAGCTGCTCAACCAGCCCAACCAGTGGCC...CCCGAGAAGTGCTCTTGGCTGACCCCTCTGGTGTGTGGTGAGGGGCTTTCTCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp CTTCTGGAGCAGGTGACTCACTCCATATCTCCTCCCCATCTCCCCTGGACGGTCGGCCACTGGTTGGGCTaGTTGAGCAGCTTCACGATG +
Preference number: 4 (lower is better)
Translates to: LLEQVTHSISPPHLPWTVGHWLG*LSSFTM
Trigger: CATCGTGAAGCTGCTCAACCAGCCCAACCAGTGGCC...GACCGTCCAGGGGAGATGGGGAGGAGATATGGAGTGAGTCACCTGCTCCAGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp AAGAGAAAGCCCCTCACCACACACCAGAGGGGTCAGCCAAGAGCACTTCTCGGGTTGACCAGTGGCCACTaGTTGGGCTGGTTGAGCAGC +
Preference number: 4 (lower is better)
Translates to: KRKPLTTHQRGQPRALLGLTSGH*LGWLSS
Trigger: GCTGCTCAACCAGCCCAACCAGTGGCCACTGGTCAA...CCCGAGAAGTGCTCTTGGCTGACCCCTCTGGTGTGTGGTGAGGGGCTTTCTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp GAACACTATCCCAAGAAAGACCCTACGGAGGACCTCTGGAGGCGCAGGGTGCAGTTGACCAGTGGCCACTaGTTGGGCTGGTTGAGCAGC +
Preference number: 4 (lower is better)
Translates to: EHYPKKDPTEDLWRRRVQLTSGH*LGWLSS
Trigger: GCTGCTCAACCAGCCCAACCAGTGGCCACTGGTCAA...CTGCACCCTGCGCCTCCAGAGGTCCTCCGTAGGGTCTTTCTTGGGATAGTGTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp GGGAAAACAGAATGGGTACTTGAGTCTGAAGCTTTAGTGGCCAGGGCCACAGGGCCGGCAGCCACGCGCTaGATGTTCTCCACCGACGAG +
Preference number: 4 (lower is better)
Translates to: GKTEWVLESEALVARATGPAATR*MFSTDE
Trigger: CTCGTCGGTGGAGAACATCCAGCGCGTGGCTGCCGG...CCCTGTGGCCCTGGCCACTAAAGCTTCAGACTCAAGTACCCATTCTGTTTTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp GGGAAAACAGAATGGGTACTTGAGTCTGAAGCTTTAGTGGCCAGGGCCACAGGGGCCGCCTCCTTGTCCTaGGCCAGCTCACACAGCACC +
Preference number: 4 (lower is better)
Translates to: GKTEWVLESEALVARATGAASLS*ASSHST
Trigger: GGTGCTGTGTGAGCTGGCCCAGGACAAGGAGGCGGC...CCCTGTGGCCCTGGCCACTAAAGCTTCAGACTCAAGTACCCATTCTGTTTTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp AGTGAGAAAATCAGACCCAGAGAAGGAACCAAAGCCCTTCCGGGCCCAGGCAGCATGGGAATCATGCTCTaGGCAGCCTCCCAGGCAGCC +
Preference number: 4 (lower is better)
Translates to: SEKIRPREGTKALPGPGSMGIML*AASQAA
Trigger: GGCTGCCTGGGAGGCTGCCCAGAGCATGATTCCCAT...GCTGCCTGGGCCCGGAAGGGCTTTGGTTCCTTCTCTGGGTCTGATTTTCTCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp GGCACTTTTCTGTCTTGCCCCATCGCCTGCACGGAGAGCCTCTCAGATGAGGAAATGGGAATCATGCTCTaGGCAGCCTCCCAGGCAGCC +
Preference number: 4 (lower is better)
Translates to: GTFLSCPIACTESLSDEEMGIML*AASQAA
Trigger: GGCTGCCTGGGAGGCTGCCCAGAGCATGATTCCCAT...TTCCTCATCTGAGAGGCTCTCCGTGCAGGCGATGGGGCAAGACAGAAAAGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp TGGAGGCCCTGGGGGCTTAGGGCAGTTGGTCGGTGGAGTTCAGTGAGAAAATCACAAGGGGCACATCGCTaGAGTACATGGGGCGGTAGG +
Preference number: 4 (lower is better)
Translates to: WRPWGLRAVGRWSSVRKSQGAHR*STWGGR
Trigger: CCTACCGCCCCATGTACTCCAGCGATGTGCCCCTTG...TGATTTTCTCACTGAACTCCACCGACCAACTGCCCTAAGCCCCCAGGGCCTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp CCCTGGGGGCTTAGGGCAGTTGGTCGGTGGAGTTCAGTGAGAAAATCAGACCCACAAGGGGCACATCGCTaGAGTACATGGGGCGGTAGG +
Preference number: 4 (lower is better)
Translates to: PWGLRAVGRWSSVRKSDPQGAHR*STWGGR
Trigger: CCTACCGCCCCATGTACTCCAGCGATGTGCCCCTTG...TGGGTCTGATTTTCTCACTGAACTCCACCGACCAACTGCCCTAAGCCCCCAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp AGTTCAGTGAGAAAATCAGACCCAGAGAAGGAACCAAAGCCCTTCCGGGCCCAGCCTACGGAGGACCTCTaGAGGCGCAGGGTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: SSVRKSDPEKEPKPFRAQPTEDL*RRRVQQ
Trigger: CTGCTGCACCCTGCGCCTCCAGAGGTCCTCCGTAGG...CTGGGCCCGGAAGGGCTTTGGTTCCTTCTCTGGGTCTGATTTTCTCACTGAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp CCATCGCCTGCACGGAGAGCCTCTCAGATGAGGAACCGCACTGGGGCCAGGCCGTGGGGGAAAACAGAATaGGTACTTGAGTCTGAAGCT +
Preference number: 4 (lower is better)
Translates to: PSPARRASQMRNRTGARPWGKTE*VLESEA
Trigger: AGCTTCAGACTCAAGTACCCATTCTGTTTTCCCCCA...CGGCCTGGCCCCAGTGCGGTTCCTCATCTGAGAGGCTCTCCGTGCAGGCGATGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310706.9
ENST00000393930.5
CDS-3UTR CCA 90 bp GAATGGGTACTTGAGTCTGAAGCTTTAGTGGCCAGGGCCACAGGGGCGGGGAGGTGGATTTTGGGGGTTTaGGTCTCGAACCTGGGCCCT +
Preference number: 4 (lower is better)
Translates to: EWVLESEALVARATGAGRWILGV*VSNLGP
Trigger: AGGGCCCAGGTTCGAGACCCAAACCCCCAAAATCCA...CCTCCCCGCCCCTGTGGCCCTGGCCACTAAAGCTTCAGACTCAAGTACCCATTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp GAAAATCAGACCCAGAGAAGGAACCAAAGCCCTTCCGGGCCCAGGCAGCTGGAGGTTTCAGCGGGGAGATaGGAGGGCCTCCAACAGAAG +
Preference number: 4 (lower is better)
Translates to: ENQTQRRNQSPSGPRQLEVSAGR*EGLQQK
Trigger: CTTCTGTTGGAGGCCCTCCCATCTCCCCGCTGAAAC...CTCCAGCTGCCTGGGCCCGGAAGGGCTTTGGTTCCTTCTCTGGGTCTGATTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393931.8
CDS-3UTR TCA 90 bp AAAACAGAATGGGTACTTGAGTCTGAAGCTTTAGTGGCCAGGGCCACAGGGGCGGGATGCCACCCGACTTaGAGATGGCGAGCAGCCCCT +
Preference number: 4 (lower is better)
Translates to: KTEWVLESEALVARATGAGCHPT*RWRAAP
Trigger: AGGGGCTGCTCGCCATCTTCAAGTCGGGTGGCATCC...CGCCCCTGTGGCCCTGGCCACTAAAGCTTCAGACTCAAGTACCCATTCTGTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR TCA 90 bp GAACACTATCCCAAGAAAGACCCTACGGAGGACCTCTGGAGGCGCAGGGTGCAGCACCATTGGCCAGGATaGTCAGCTTGCTCTCCTGGT +
Preference number: 4 (lower is better)
Translates to: EHYPKKDPTEDLWRRRVQHHWPG*SACSPG
Trigger: ACCAGGAGAGCAAGCTGATCATCCTGGCCAATGGTG...CTGCACCCTGCGCCTCCAGAGGTCCTCCGTAGGGTCTTTCTTGGGATAGTGTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR TCA 90 bp GAAAATCAGACCCAGAGAAGGAACCAAAGCCCTTCCGGGCCCAGGCAGCTGGAGAACTGTAGTTACGCATaGTCTGCACGAGGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: ENQTQRRNQSPSGPRQLENCSYA*SARGPG
Trigger: CCCAGGCCCTCGTGCAGATCATGCGTAACTACAGTT...CTCCAGCTGCCTGGGCCCGGAAGGGCTTTGGTTCCTTCTCTGGGTCTGATTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR TCA 90 bp AGTGAGAAAATCAGACCCAGAGAAGGAACCAAAGCCCTTCCGGGCCCAGGCAGCACACGGATAGCACCTTaGGCACACGACTGGTGGTCC +
Preference number: 4 (lower is better)
Translates to: SEKIRPREGTKALPGPGSTRIAP*AHDWWS
Trigger: GGACCACCAGTCGTGTGCTCAAGGTGCTATCCGTGT...GCTGCCTGGGCCCGGAAGGGCTTTGGTTCCTTCTCTGGGTCTGATTTTCTCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR TCA 90 bp AGAACACTATCCCAAGAAAGACCCTACGGAGGACCTCTGGAGGCGCAGGGTGCAACACGGATAGCACCTTaGGCACACGACTGGTGGTCC +
Preference number: 4 (lower is better)
Translates to: RTLSQERPYGGPLEAQGATRIAP*AHDWWS
Trigger: GGACCACCAGTCGTGTGCTCAAGGTGCTATCCGTGT...TGCACCCTGCGCCTCCAGAGGTCCTCCGTAGGGTCTTTCTTGGGATAGTGTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR TCA 90 bp TTCTGTCTTGCCCCATCGCCTGCACGGAGAGCCTCTCAGATGAGGAACCGCACTCTGGGATGCCATAGTTaGGACGCACAGAGTTCTGGG +
Preference number: 4 (lower is better)
Translates to: FCLAPSPARRASQMRNRTLGCHS*DAQSSG
Trigger: CCCAGAACTCTGTGCGTCTCAACTATGGCATCCCAG...AGTGCGGTTCCTCATCTGAGAGGCTCTCCGTGCAGGCGATGGGGCAAGACAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310706.9
ENST00000393930.5
CDS-3UTR TCA 90 bp GAACACTATCCCAAGAAAGACCCTACGGAGGACCTCTGGAGGCGCAGGGTGCAGCTGGGATGCCATAGTTaGGACGCACAGAGTTCTGGG +
Preference number: 4 (lower is better)
Translates to: EHYPKKDPTEDLWRRRVQLGCHS*DAQSSG
Trigger: CCCAGAACTCTGTGCGTCTCAACTATGGCATCCCAG...CTGCACCCTGCGCCTCCAGAGGTCCTCCGTAGGGTCTTTCTTGGGATAGTGTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR TCA 90 bp GAAAATCAGACCCAGAGAAGGAACCAAAGCCCTTCCGGGCCCAGGCAGCTGGAGACAGGGCCAGATTCCTaGTCAAGCCGATGGTTGCCT +
Preference number: 4 (lower is better)
Translates to: ENQTQRRNQSPSGPRQLETGPDS*SSRWLP
Trigger: AGGCAACCATCGGCTTGATCAGGAATCTGGCCCTGT...CTCCAGCTGCCTGGGCCCGGAAGGGCTTTGGTTCCTTCTCTGGGTCTGATTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR TCA 90 bp GAACACTATCCCAAGAAAGACCCTACGGAGGACCTCTGGAGGCGCAGGGTGCAGACAGGGGAATGGTGTTaGGCCGGAAGATCTCCATGC +
Preference number: 4 (lower is better)
Translates to: EHYPKKDPTEDLWRRRVQTGEWC*AGRSPC
Trigger: GCATGGAGATCTTCCGGCTCAACACCATTCCCCTGT...CTGCACCCTGCGCCTCCAGAGGTCCTCCGTAGGGTCTTTCTTGGGATAGTGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR TCA 90 bp CGTTGCTGGGGGAAAACAGAATGGGTACTTGAGTCTGAAGCTTTAGTGGCCAGGAGTGCAGCAACTCCATaGGTGGGGCCGAGGCCCCCT +
Preference number: 4 (lower is better)
Translates to: RCWGKTEWVLESEALVARSAATP*VGPRPP
Trigger: AGGGGGCCTCGGCCCCACTCATGGAGTTGCTGCACT...CCTGGCCACTAAAGCTTCAGACTCAAGTACCCATTCTGTTTTCCCCCAGCAACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR TCA 90 bp AGTGAGAAAATCAGACCCAGAGAAGGAACCAAAGCCCTTCCGGGCCCAGGCAGCGGAGAGCCTCTCAGATaGGGAACCGCACCTGTTAGG +
Preference number: 4 (lower is better)
Translates to: SEKIRPREGTKALPGPGSGEPLR*GTAPVR
Trigger: CCTAACAGGTGCGGTTCCTCATCTGAGAGGCTCTCC...GCTGCCTGGGCCCGGAAGGGCTTTGGTTCCTTCTCTGGGTCTGATTTTCTCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393931.8
CDS-3UTR GCA 90 bp CGTTGCTGGGGGAAAACAGAATGGGTACTTGAGTCTGAAGCTTTAGTGGCCAGGAGGGGCACCATCTTTTaGAGCCCGTCGGCCAGGCGC +
Preference number: 4 (lower is better)
Translates to: RCWGKTEWVLESEALVARRGTIF*SPSARR
Trigger: GCGCCTGGCCGACGGGCTGCAAAAGATGGTGCCCCT...CCTGGCCACTAAAGCTTCAGACTCAAGTACCCATTCTGTTTTCCCCCAGCAACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR GCA 90 bp GGGAAAACAGAATGGGTACTTGAGTCTGAAGCTTTAGTGGCCAGGGCCACAGGGTGCTGGTCAGGTGCTTaGCCAGGGCCTGCATCCCAC +
Preference number: 4 (lower is better)
Translates to: GKTEWVLESEALVARATGCWSGA*PGPASH
Trigger: GTGGGATGCAGGCCCTGGGCAAGCACCTGACCAGCA...CCCTGTGGCCCTGGCCACTAAAGCTTCAGACTCAAGTACCCATTCTGTTTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR GCA 90 bp AGTGAGAAAATCAGACCCAGAGAAGGAACCAAAGCCCTTCCGGGCCCAGGCAGCCCACATCTGAGAGGTTaGGCAGGGTCCACAGGCAGT +
Preference number: 4 (lower is better)
Translates to: SEKIRPREGTKALPGPGSPHLRG*AGSTGS
Trigger: ACTGCCTGTGGACCCTGCGCAACCTCTCAGATGTGG...GCTGCCTGGGCCCGGAAGGGCTTTGGTTCCTTCTCTGGGTCTGATTTTCTCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR GCA 90 bp TCTGGAGGCGCAGGGTGCAGCAGGAAGTTACACCCCGGCTTCCCCAGCTCAGGCTGTTCTTGCTGTTGTTaGATGTCAGGTTGGAGAGTG +
Preference number: 4 (lower is better)
Translates to: SGGAGCSRKLHPGFPSSGCSCCC*MSGWRV
Trigger: CACTCTCCAACCTGACATGCAACAACAGCAAGAACA...GCCTGAGCTGGGGAAGCCGGGGTGTAACTTCCTGCTGCACCCTGCGCCTCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR GCA 90 bp GGGAAAACAGAATGGGTACTTGAGTCTGAAGCTTTAGTGGCCAGGGCCACAGGGATGACCGCTGCCTCCTaGAGCGGGGCATGGTTGGCT +
Preference number: 4 (lower is better)
Translates to: GKTEWVLESEALVARATGMTAAS*SGAWLA
Trigger: AGCCAACCATGCCCCGCTGCAGGAGGCAGCGGTCAT...CCCTGTGGCCCTGGCCACTAAAGCTTCAGACTCAAGTACCCATTCTGTTTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR GCA 90 bp CCCTGGGGGCTTAGGGCAGTTGGTCGGTGGAGTTCAGTGAGAAAATCAGACCCATGTGCAGTGCTCCGGTaGAGCCCTCCACAATCTCCT +
Preference number: 4 (lower is better)
Translates to: PWGLRAVGRWSSVRKSDPCAVLR*SPPQSP
Trigger: AGGAGATTGTGGAGGGCTGCACCGGAGCACTGCACA...TGGGTCTGATTTTCTCACTGAACTCCACCGACCAACTGCCCTAAGCCCCCAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR GCA 90 bp CGTTGCTGGGGGAAAACAGAATGGGTACTTGAGTCTGAAGCTTTAGTGGCCAGGGGCGAGGATGTGCAGTaGTCCGGTGCAGCCCTCCAC +
Preference number: 4 (lower is better)
Translates to: RCWGKTEWVLESEALVARGEDVQ*SGAALH
Trigger: GTGGAGGGCTGCACCGGAGCACTGCACATCCTCGCC...CCTGGCCACTAAAGCTTCAGACTCAAGTACCCATTCTGTTTTCCCCCAGCAACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR GCA 90 bp CCCTGGGGGCTTAGGGCAGTTGGTCGGTGGAGTTCAGTGAGAAAATCAGACCCACAGGCAGCCGGGTCATaGTTGAAGAGGGAGTTGGTG +
Preference number: 4 (lower is better)
Translates to: PWGLRAVGRWSSVRKSDPQAAGS*LKRELV
Trigger: CACCAACTCCCTCTTCAAGCATGACCCGGCTGCCTG...TGGGTCTGATTTTCTCACTGAACTCCACCGACCAACTGCCCTAAGCCCCCAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR GCA 90 bp AAGAGAAAGCCCCTCACCACACACCAGAGGGGTCAGCCAAGAGCACTTCTCGGGCCATCCATGTCCATGTaGATCTCCAGCGGGTCAAGG +
Preference number: 4 (lower is better)
Translates to: KRKPLTTHQRGQPRALLGPSMSM*ISSGSR
Trigger: CCTTGACCCGCTGGAGATGCACATGGACATGGATGG...CCCGAGAAGTGCTCTTGGCTGACCCCTCTGGTGTGTGGTGAGGGGCTTTCTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR GCA 90 bp CGTTGCTGGGGGAAAACAGAATGGGTACTTGAGTCTGAAGCTTTAGTGGCCAGGGGCCAGCATGTGGTCTaGAGTGGGGTACGGGGGCCT +
Preference number: 4 (lower is better)
Translates to: RCWGKTEWVLESEALVARGQHVV*SGVRGP
Trigger: AGGCCCCCGTACCCCACTGCAGACCACATGCTGGCC...CCTGGCCACTAAAGCTTCAGACTCAAGTACCCATTCTGTTTTCCCCCAGCAACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR GCA 90 bp AGAACACTATCCCAAGAAAGACCCTACGGAGGACCTCTGGAGGCGCAGGGTGCAGGCACTTTTCTGTCTTaGCCCATCGCCTGCACGGAG +
Preference number: 4 (lower is better)
Translates to: RTLSQERPYGGPLEAQGAGTFLS*PIACTE
Trigger: CTCCGTGCAGGCGATGGGGCAAGACAGAAAAGTGCC...TGCACCCTGCGCCTCCAGAGGTCCTCCGTAGGGTCTTTCTTGGGATAGTGTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR GCA 90 bp GGGAAAACAGAATGGGTACTTGAGTCTGAAGCTTTAGTGGCCAGGGCCACAGGGGGGGCTCGGTGGACCTaGATCCCCAGAAGCTCAAGC +
Preference number: 4 (lower is better)
Translates to: GKTEWVLESEALVARATGGARWT*IPRSSS
Trigger: GCTTGAGCTTCTGGGGATGCAGGTCCACCGAGCCCC...CCCTGTGGCCCTGGCCACTAAAGCTTCAGACTCAAGTACCCATTCTGTTTTCCC
58% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000393931.8
CDS-3UTR CCA 90 bp GAATGGGTACTTGAGTCTGAAGCTTTAGTGGCCAGGGCCACAGGGGCGGGGAGGTGGCCCTGGCTGTTGTaGACATCTGGTACTCCAGAT +
Preference number: 4 (lower is better)
Translates to: EWVLESEALVARATGAGRWPWLL*TSGTPD
Trigger: ATCTGGAGTACCAGATGTCCACAACAGCCAGGGCCA...CCTCCCCGCCCCTGTGGCCCTGGCCACTAAAGCTTCAGACTCAAGTACCCATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp AGTTCAGTGAGAAAATCAGACCCAGAGAAGGAACCAAAGCCCTTCCGGGCCCAGCCTCCCGCACCCGTTTaGCCCTGGCTGTTGTGGACA +
Preference number: 4 (lower is better)
Translates to: SSVRKSDPEKEPKPFRAQPPAPV*PWLLWT
Trigger: TGTCCACAACAGCCAGGGCCAAACGGGTGCGGGAGG...CTGGGCCCGGAAGGGCTTTGGTTCCTTCTCTGGGTCTGATTTTCTCACTGAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp AGTTCAGTGAGAAAATCAGACCCAGAGAAGGAACCAAAGCCCTTCCGGGCCCAGACACACCAGGGCACATaGCCTCCCGCACCCGTTTGG +
Preference number: 4 (lower is better)
Translates to: SSVRKSDPEKEPKPFRAQTHQGT*PPAPVW
Trigger: CCAAACGGGTGCGGGAGGCCATGTGCCCTGGTGTGT...CTGGGCCCGGAAGGGCTTTGGTTCCTTCTCTGGGTCTGATTTTCTCACTGAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp CCCTGGGGGCTTAGGGCAGTTGGTCGGTGGAGTTCAGTGAGAAAATCAGACCCACGCTGGTATTCTGCATaGTACGCACGACAGCGGCCA +
Preference number: 4 (lower is better)
Translates to: PWGLRAVGRWSSVRKSDPRWYSA*YARQRP
Trigger: TGGCCGCTGTCGTGCGTACCATGCAGAATACCAGCG...TGGGTCTGATTTTCTCACTGAACTCCACCGACCAACTGCCCTAAGCCCCCAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp CCCTGGGGGCTTAGGGCAGTTGGTCGGTGGAGTTCAGTGAGAAAATCAGACCCAATCTTGGCGCCCTCCTaGTACAGGAGCAGGTTGTGC +
Preference number: 4 (lower is better)
Translates to: PWGLRAVGRWSSVRKSDPILAPS*YRSRLC
Trigger: GCACAACCTGCTCCTGTACCAGGAGGGCGCCAAGAT...TGGGTCTGATTTTCTCACTGAACTCCACCGACCAACTGCCCTAAGCCCCCAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp TTCTGTCTTGCCCCATCGCCTGCACGGAGAGCCTCTCAGATGAGGAACCGCACTCACCAGCCTCCACAATaGCAGGCTTATTGCTGGGAC +
Preference number: 4 (lower is better)
Translates to: FCLAPSPARRASQMRNRTHQPPQ*QAYCWD
Trigger: GTCCCAGCAATAAGCCTGCCATTGTGGAGGCTGGTG...AGTGCGGTTCCTCATCTGAGAGGCTCTCCGTGCAGGCGATGGGGCAAGACAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310706.9
ENST00000393930.5
CDS-3UTR CCA 90 bp GTTTCAGCGGGGAGATGGGAGGGCCTCCAACAGAAGGAGGTTCTAGAGAGGAGGCACCAGCCTCCACAATaGCAGGCTTATTGCTGGGAC +
Preference number: 4 (lower is better)
Translates to: VSAGRWEGLQQKEVLERRHQPPQ*QAYCWD
Trigger: GTCCCAGCAATAAGCCTGCCATTGTGGAGGCTGGTG...CCTCCTCTCTAGAACCTCCTTCTGTTGGAGGCCCTCCCATCTCCCCGCTGAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393931.8
CDS-3UTR CCA 90 bp GAACACTATCCCAAGAAAGACCCTACGGAGGACCTCTGGAGGCGCAGGGTGCAGTGTTGCATGTCAGGTTaGAGAGTGTGCCCGTGGCAC +
Preference number: 4 (lower is better)
Translates to: EHYPKKDPTEDLWRRRVQCCMSG*RVCPWH
Trigger: GTGCCACGGGCACACTCTCCAACCTGACATGCAACA...CTGCACCCTGCGCCTCCAGAGGTCCTCCGTAGGGTCTTTCTTGGGATAGTGTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp CCCTGGGGGCTTAGGGCAGTTGGTCGGTGGAGTTCAGTGAGAAAATCAGACCCAGGCCACTGGTTGGGCTaGTTGAGCAGCTTCACGATG +
Preference number: 4 (lower is better)
Translates to: PWGLRAVGRWSSVRKSDPGHWLG*LSSFTM
Trigger: CATCGTGAAGCTGCTCAACCAGCCCAACCAGTGGCC...TGGGTCTGATTTTCTCACTGAACTCCACCGACCAACTGCCCTAAGCCCCCAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp GGCACTTTTCTGTCTTGCCCCATCGCCTGCACGGAGAGCCTCTCAGATGAGGAATTGACCAGTGGCCACTaGTTGGGCTGGTTGAGCAGC +
Preference number: 4 (lower is better)
Translates to: GTFLSCPIACTESLSDEELTSGH*LGWLSS
Trigger: GCTGCTCAACCAGCCCAACCAGTGGCCACTGGTCAA...TTCCTCATCTGAGAGGCTCTCCGTGCAGGCGATGGGGCAAGACAGAAAAGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp CCCTGGGGGCTTAGGGCAGTTGGTCGGTGGAGTTCAGTGAGAAAATCAGACCCAGGTTGCCTTGACCAGTaGCCACTGGTTGGGCTGGTT +
Preference number: 4 (lower is better)
Translates to: PWGLRAVGRWSSVRKSDPGCLDQ*PLVGLV
Trigger: AACCAGCCCAACCAGTGGCCACTGGTCAAGGCAACC...TGGGTCTGATTTTCTCACTGAACTCCACCGACCAACTGCCCTAAGCCCCCAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp GGGAAAACAGAATGGGTACTTGAGTCTGAAGCTTTAGTGGCCAGGGCCACAGGGGCCTTCACCAGCAGTTaGACGAGGCGGGGGATGACC +
Preference number: 4 (lower is better)
Translates to: GKTEWVLESEALVARATGAFTSS*TRRGMT
Trigger: GGTCATCCCCCGCCTCGTCCAACTGCTGGTGAAGGC...CCCTGTGGCCCTGGCCACTAAAGCTTCAGACTCAAGTACCCATTCTGTTTTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp AGTTCAGTGAGAAAATCAGACCCAGAGAAGGAACCAAAGCCCTTCCGGGCCCAGCGCTGGGCATCCTGGTaGGCCTTCACCAGCAGTTGG +
Preference number: 4 (lower is better)
Translates to: SSVRKSDPEKEPKPFRAQRWASW*AFTSSW
Trigger: CCAACTGCTGGTGAAGGCCCACCAGGATGCCCAGCG...CTGGGCCCGGAAGGGCTTTGGTTCCTTCTCTGGGTCTGATTTTCTCACTGAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp AAAACAGAATGGGTACTTGAGTCTGAAGCTTTAGTGGCCAGGGCCACAGGGGCGTGGCGCTGGGCATCCTaGTGGGCCTTCACCAGCAGT +
Preference number: 4 (lower is better)
Translates to: KTEWVLESEALVARATGAWRWAS*WAFTSS
Trigger: ACTGCTGGTGAAGGCCCACCAGGATGCCCAGCGCCA...CGCCCCTGTGGCCCTGGCCACTAAAGCTTCAGACTCAAGTACCCATTCTGTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp CGTTGCTGGGGGAAAACAGAATGGGTACTTGAGTCTGAAGCTTTAGTGGCCAGGCCGGCAGCCACGCGCTaGATGTTCTCCACCGACGAG +
Preference number: 4 (lower is better)
Translates to: RCWGKTEWVLESEALVARPAATR*MFSTDE
Trigger: CTCGTCGGTGGAGAACATCCAGCGCGTGGCTGCCGG...CCTGGCCACTAAAGCTTCAGACTCAAGTACCCATTCTGTTTTCCCCCAGCAACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp AGTTCAGTGAGAAAATCAGACCCAGAGAAGGAACCAAAGCCCTTCCGGGCCCAGCCCCCTCTGCATCAATaGCGTCGGCCGCCTCCTTGT +
Preference number: 4 (lower is better)
Translates to: SSVRKSDPEKEPKPFRAQPPLHQ*RRPPPC
Trigger: ACAAGGAGGCGGCCGACGCCATTGATGCAGAGGGGG...CTGGGCCCGGAAGGGCTTTGGTTCCTTCTCTGGGTCTGATTTTCTCACTGAACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp CCCACCAAAGACACAAGAAGAAGGCAGGCCAGGGCACACCGTGCTTGGGGAAGCACATGGGGCGGTAGGTaGCATCCATGTCATCTCCAT +
Preference number: 4 (lower is better)
Translates to: PTKDTRRRQARAHRAWGSTWGGR*HPCHLH
Trigger: ATGGAGATGACATGGATGCCACCTACCGCCCCATGT...GCTTCCCCAAGCACGGTGTGCCCTGGCCTGCCTTCTTCTTGTGTCTTTGGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393931.8
CDS-3UTR CCA 90 bp TGGAGGCCCTGGGGGCTTAGGGCAGTTGGTCGGTGGAGTTCAGTGAGAAAATCACATCGCTGGAGTACATaGGGCGGTAGGTGGCATCCA +
Preference number: 4 (lower is better)
Translates to: WRPWGLRAVGRWSSVRKSHRWST*GGRWHP
Trigger: TGGATGCCACCTACCGCCCCATGTACTCCAGCGATG...TGATTTTCTCACTGAACTCCACCGACCAACTGCCCTAAGCCCCCAGGGCCTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp GAACACTATCCCAAGAAAGACCCTACGGAGGACCTCTGGAGGCGCAGGGTGCAGTGGATTTTGGGGGTTTaGGTCTCGAACCTGGGCCCT +
Preference number: 4 (lower is better)
Translates to: EHYPKKDPTEDLWRRRVQWILGV*VSNLGP
Trigger: AGGGCCCAGGTTCGAGACCCAAACCCCCAAAATCCA...CTGCACCCTGCGCCTCCAGAGGTCCTCCGTAGGGTCTTTCTTGGGATAGTGTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp CTTCTGGAGCAGGTGACTCACTCCATATCTCCTCCCCATCTCCCCTGGACGGTCCCTGGAGAGAGAAGCTaGCATCTTCTGGAGCAGGTG +
Preference number: 4 (lower is better)
Translates to: LLEQVTHSISPPHLPWTVPGERS*HLLEQV
Trigger: CACCTGCTCCAGAAGATGCCAGCTTCTCTCTCCAGG...GACCGTCCAGGGGAGATGGGGAGGAGATATGGAGTGAGTCACCTGCTCCAGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp AAGAGAAAGCCCCTCACCACACACCAGAGGGGTCAGCCAAGAGCACTTCTCGGGCCTGGAGAGAGAAGCTaGCATCTTCTGGAGCAGGTG +
Preference number: 4 (lower is better)
Translates to: KRKPLTTHQRGQPRALLGPGERS*HLLEQV
Trigger: CACCTGCTCCAGAAGATGCCAGCTTCTCTCTCCAGG...CCCGAGAAGTGCTCTTGGCTGACCCCTCTGGTGTGTGGTGAGGGGCTTTCTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp GGGAAAACAGAATGGGTACTTGAGTCTGAAGCTTTAGTGGCCAGGGCCACAGGGGCTAGGGCAGCTGTGTaGGTGGGACAGGGGTGTGAG +
Preference number: 4 (lower is better)
Translates to: GKTEWVLESEALVARATGARAAV*VGQGCE
Trigger: CTCACACCCCTGTCCCACCCACACAGCTGCCCTAGC...CCCTGTGGCCCTGGCCACTAAAGCTTCAGACTCAAGTACCCATTCTGTTTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp CCCTGGGGGCTTAGGGCAGTTGGTCGGTGGAGTTCAGTGAGAAAATCAGACCCAAGGGCACACCGTGCTTaGGGAAGCTCAGCAGCAAAG +
Preference number: 4 (lower is better)
Translates to: PWGLRAVGRWSSVRKSDPRAHRA*GSSAAK
Trigger: CTTTGCTGCTGAGCTTCCCCAAGCACGGTGTGCCCT...TGGGTCTGATTTTCTCACTGAACTCCACCGACCAACTGCCCTAAGCCCCCAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393931.8
CDS-3UTR CCA 90 bp GAACACTATCCCAAGAAAGACCCTACGGAGGACCTCTGGAGGCGCAGGGTGCAGTTTCAGGAAAGCGGGTaGGAAAGGTCTGTGCAGGCC +
Preference number: 4 (lower is better)
Translates to: EHYPKKDPTEDLWRRRVQFQESG*ERSVQA
Trigger: GGCCTGCACAGACCTTTCCCACCCGCTTTCCTGAAA...CTGCACCCTGCGCCTCCAGAGGTCCTCCGTAGGGTCTTTCTTGGGATAGTGTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393930.5
CDS-3UTR TCA 90 bp CGTTGCTGGGGGAAAACAGAATGGGTACTTGAGTCTGAAGCTTTAGTGGCCAGGGCAGGCAGTCGGTGGTaGTGGCCAGGAACTTGGGGT +
Preference number: 4 (lower is better)
Translates to: RCWGKTEWVLESEALVARAGSRW*WPGTWG
Trigger: ACCCCAAGTTCCTGGCCATCACCACCGACTGCCTGC...CCTGGCCACTAAAGCTTCAGACTCAAGTACCCATTCTGTTTTCCCCCAGCAACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR TCA 90 bp GGCACTTTTCTGTCTTGCCCCATCGCCTGCACGGAGAGCCTCTCAGATGAGGAACACCATTGGCCAGGATaGTCAGCTTGCTCTCCTGGT +
Preference number: 4 (lower is better)
Translates to: GTFLSCPIACTESLSDEEHHWPG*SACSPG
Trigger: ACCAGGAGAGCAAGCTGATCATCCTGGCCAATGGTG...TTCCTCATCTGAGAGGCTCTCCGTGCAGGCGATGGGGCAAGACAGAAAAGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR TCA 90 bp AGTGAGAAAATCAGACCCAGAGAAGGAACCAAAGCCCTTCCGGGCCCAGGCAGCAACTGTAGTTACGCATaGTCTGCACGAGGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: SEKIRPREGTKALPGPGSNCSYA*SARGPG
Trigger: CCCAGGCCCTCGTGCAGATCATGCGTAACTACAGTT...GCTGCCTGGGCCCGGAAGGGCTTTGGTTCCTTCTCTGGGTCTGATTTTCTCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR TCA 90 bp AAAACAGAATGGGTACTTGAGTCTGAAGCTTTAGTGGCCAGGGCCACAGGGGCGCTTGGTGGCCACATCTaGGAGGTTGCGCAGGGTCCA +
Preference number: 4 (lower is better)
Translates to: KTEWVLESEALVARATGALGGHI*EVAQGP
Trigger: TGGACCCTGCGCAACCTCTCAGATGTGGCCACCAAG...CGCCCCTGTGGCCCTGGCCACTAAAGCTTCAGACTCAAGTACCCATTCTGTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR TCA 90 bp AAAACAGAATGGGTACTTGAGTCTGAAGCTTTAGTGGCCAGGGCCACAGGGGCGGCAGGATGGCATGGATaGGAGCCTCCACACCGCTGT +
Preference number: 4 (lower is better)
Translates to: KTEWVLESEALVARATGAAGWHG*EPPHRC
Trigger: ACAGCGGTGTGGAGGCTCTCATCCATGCCATCCTGC...CGCCCCTGTGGCCCTGGCCACTAAAGCTTCAGACTCAAGTACCCATTCTGTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR TCA 90 bp AGTTCAGTGAGAAAATCAGACCCAGAGAAGGAACCAAAGCCCTTCCGGGCCCAGAGACGGCAGGCTCCGTaGTGTCGTCCTTGTCACCAG +
Preference number: 4 (lower is better)
Translates to: SSVRKSDPEKEPKPFRAQRRQAP*CRPCHQ
Trigger: CTGGTGACAAGGACGACATCACGGAGCCTGCCGTCT...CTGGGCCCGGAAGGGCTTTGGTTCCTTCTCTGGGTCTGATTTTCTCACTGAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR TCA 90 bp TGGAGGCCCTGGGGGCTTAGGGCAGTTGGTCGGTGGAGTTCAGTGAGAAAATCAACAGGGCCAGATTCCTaGTCAAGCCGATGGTTGCCT +
Preference number: 4 (lower is better)
Translates to: WRPWGLRAVGRWSSVRKSTGPDS*SSRWLP
Trigger: AGGCAACCATCGGCTTGATCAGGAATCTGGCCCTGT...TGATTTTCTCACTGAACTCCACCGACCAACTGCCCTAAGCCCCCAGGGCCTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR TCA 90 bp CCCTGGGGGCTTAGGGCAGTTGGTCGGTGGAGTTCAGTGAGAAAATCAGACCCAACAGGGGAATGGTGTTaGGCCGGAAGATCTCCATGC +
Preference number: 4 (lower is better)
Translates to: PWGLRAVGRWSSVRKSDPTGEWC*AGRSPC
Trigger: GCATGGAGATCTTCCGGCTCAACACCATTCCCCTGT...TGGGTCTGATTTTCTCACTGAACTCCACCGACCAACTGCCCTAAGCCCCCAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR TCA 90 bp AGAACACTATCCCAAGAAAGACCCTACGGAGGACCTCTGGAGGCGCAGGGTGCAACAGGGGAATGGTGTTaGGCCGGAAGATCTCCATGC +
Preference number: 4 (lower is better)
Translates to: RTLSQERPYGGPLEAQGATGEWC*AGRSPC
Trigger: GCATGGAGATCTTCCGGCTCAACACCATTCCCCTGT...TGCACCCTGCGCCTCCAGAGGTCCTCCGTAGGGTCTTTCTTGGGATAGTGTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR TCA 90 bp GAAAATCAGACCCAGAGAAGGAACCAAAGCCCTTCCGGGCCCAGGCAGCTGGAGCTCCATAGGGCTCATTaGTGGGAATCATGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: ENQTQRRNQSPSGPRQLELHRAH*WESCSG
Trigger: CCCAGAGCATGATTCCCATCAATGAGCCCTATGGAG...CTCCAGCTGCCTGGGCCCGGAAGGGCTTTGGTTCCTTCTCTGGGTCTGATTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR TCA 90 bp GAACACTATCCCAAGAAAGACCCTACGGAGGACCTCTGGAGGCGCAGGGTGCAGCTCCATAGGGCTCATTaGTGGGAATCATGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: EHYPKKDPTEDLWRRRVQLHRAH*WESCSG
Trigger: CCCAGAGCATGATTCCCATCAATGAGCCCTATGGAG...CTGCACCCTGCGCCTCCAGAGGTCCTCCGTAGGGTCTTTCTTGGGATAGTGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR GCA 90 bp AGAACACTATCCCAAGAAAGACCCTACGGAGGACCTCTGGAGGCGCAGGGTGCAAGGTCGCTGGTATTCTaGATGGTACGCACGACAGCG +
Preference number: 4 (lower is better)
Translates to: RTLSQERPYGGPLEAQGARSLVF*MVRTTA
Trigger: CGCTGTCGTGCGTACCATGCAGAATACCAGCGACCT...TGCACCCTGCGCCTCCAGAGGTCCTCCGTAGGGTCTTTCTTGGGATAGTGTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR GCA 90 bp AGTTCAGTGAGAAAATCAGACCCAGAGAAGGAACCAAAGCCCTTCCGGGCCCAGAGAGGTTGTGCAGGATaGTGGTGGTGCAGCGGGCTG +
Preference number: 4 (lower is better)
Translates to: SSVRKSDPEKEPKPFRAQRGCAG*WWCSGL
Trigger: CAGCCCGCTGCACCACCAGCATCCTGCACAACCTCT...CTGGGCCCGGAAGGGCTTTGGTTCCTTCTCTGGGTCTGATTTTCTCACTGAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR GCA 90 bp CGTTGCTGGGGGAAAACAGAATGGGTACTTGAGTCTGAAGCTTTAGTGGCCAGGGTCCACAGGCAGTTCTaGACCAGGCGGGGGCTGTTG +
Preference number: 4 (lower is better)
Translates to: RCWGKTEWVLESEALVARVHRQF*TRRGLL
Trigger: CAACAGCCCCCGCCTGGTGCAGAACTGCCTGTGGAC...CCTGGCCACTAAAGCTTCAGACTCAAGTACCCATTCTGTTTTCCCCCAGCAACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR GCA 90 bp AGTTCAGTGAGAAAATCAGACCCAGAGAAGGAACCAAAGCCCTTCCGGGCCCAGTGTAGGGCTGCTGTGTaGCTGCAGCTACGTGGCGCT +
Preference number: 4 (lower is better)
Translates to: SSVRKSDPEKEPKPFRAQCRAAV*LQLRGA
Trigger: AGCGCCACGTAGCTGCAGGCACACAGCAGCCCTACA...CTGGGCCCGGAAGGGCTTTGGTTCCTTCTCTGGGTCTGATTTTCTCACTGAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR GCA 90 bp AGTGAGAAAATCAGACCCAGAGAAGGAACCAAAGCCCTTCCGGGCCCAGGCAGCCCATCCATGTCCATGTaGATCTCCAGCGGGTCAAGG +
Preference number: 4 (lower is better)
Translates to: SEKIRPREGTKALPGPGSPSMSM*ISSGSR
Trigger: CCTTGACCCGCTGGAGATGCACATGGACATGGATGG...GCTGCCTGGGCCCGGAAGGGCTTTGGTTCCTTCTCTGGGTCTGATTTTCTCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp GAATGGGTACTTGAGTCTGAAGCTTTAGTGGCCAGGGCCACAGGGGCGGGGAGGGCTGTTGTGGACATCTaGTACTCCAGATCACCTTGG +
Preference number: 4 (lower is better)
Translates to: EWVLESEALVARATGAGRAVVDI*YSRSPW
Trigger: CCAAGGTGATCTGGAGTACCAGATGTCCACAACAGC...CCTCCCCGCCCCTGTGGCCCTGGCCACTAAAGCTTCAGACTCAAGTACCCATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp CGTTGCTGGGGGAAAACAGAATGGGTACTTGAGTCTGAAGCTTTAGTGGCCAGGACACACCAGGGCACATaGCCTCCCGCACCCGTTTGG +
Preference number: 4 (lower is better)
Translates to: RCWGKTEWVLESEALVARTHQGT*PPAPVW
Trigger: CCAAACGGGTGCGGGAGGCCATGTGCCCTGGTGTGT...CCTGGCCACTAAAGCTTCAGACTCAAGTACCCATTCTGTTTTCCCCCAGCAACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp GAACACTATCCCAAGAAAGACCCTACGGAGGACCTCTGGAGGCGCAGGGTGCAGTCCTTCTTCGACAGCTaGTTCACAATCATGGCCGCC +
Preference number: 4 (lower is better)
Translates to: EHYPKKDPTEDLWRRRVQSFFDS*FTIMAA
Trigger: GGCGGCCATGATTGTGAACCAGCTGTCGAAGAAGGA...CTGCACCCTGCGCCTCCAGAGGTCCTCCGTAGGGTCTTTCTTGGGATAGTGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp GAAAATCAGACCCAGAGAAGGAACCAAAGCCCTTCCGGGCCCAGGCAGCTGGAGTCCTTCTTCGACAGCTaGTTCACAATCATGGCCGCC +
Preference number: 4 (lower is better)
Translates to: ENQTQRRNQSPSGPRQLESFFDS*FTIMAA
Trigger: GGCGGCCATGATTGTGAACCAGCTGTCGAAGAAGGA...CTCCAGCTGCCTGGGCCCGGAAGGGCTTTGGTTCCTTCTCTGGGTCTGATTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp AAGAGAAAGCCCCTCACCACACACCAGAGGGGTCAGCCAAGAGCACTTCTCGGGCTGTGTCCAGGTCGCTaGTATTCTGCATGGTACGCA +
Preference number: 4 (lower is better)
Translates to: KRKPLTTHQRGQPRALLGLCPGR*YSAWYA
Trigger: TGCGTACCATGCAGAATACCAGCGACCTGGACACAG...CCCGAGAAGTGCTCTTGGCTGACCCCTCTGGTGTGTGGTGAGGGGCTTTCTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp AGTTCAGTGAGAAAATCAGACCCAGAGAAGGAACCAAAGCCCTTCCGGGCCCAGTGTGCAGGATGCTGGTaGTGCAGCGGGCTGTGTCCA +
Preference number: 4 (lower is better)
Translates to: SSVRKSDPEKEPKPFRAQCAGCW*CSGLCP
Trigger: TGGACACAGCCCGCTGCACCACCAGCATCCTGCACA...CTGGGCCCGGAAGGGCTTTGGTTCCTTCTCTGGGTCTGATTTTCTCACTGAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp AAAACAGAATGGGTACTTGAGTCTGAAGCTTTAGTGGCCAGGGCCACAGGGGCGGGCCCTCCTGCTTGGTaGCCACATCTGAGAGGTTGC +
Preference number: 4 (lower is better)
Translates to: KTEWVLESEALVARATGAGPPAW*PHLRGC
Trigger: GCAACCTCTCAGATGTGGCCACCAAGCAGGAGGGCC...CGCCCCTGTGGCCCTGGCCACTAAAGCTTCAGACTCAAGTACCCATTCTGTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp AGTTCAGTGAGAAAATCAGACCCAGAGAAGGAACCAAAGCCCTTCCGGGCCCAGCCAGGCCCTCCTGCTTaGTGGCCACATCTGAGAGGT +
Preference number: 4 (lower is better)
Translates to: SSVRKSDPEKEPKPFRAQPGPPA*WPHLRG
Trigger: ACCTCTCAGATGTGGCCACCAAGCAGGAGGGCCTGG...CTGGGCCCGGAAGGGCTTTGGTTCCTTCTCTGGGTCTGATTTTCTCACTGAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp AGAACACTATCCCAAGAAAGACCCTACGGAGGACCTCTGGAGGCGCAGGGTGCATGTTGCATGTCAGGTTaGAGAGTGTGCCCGTGGCAC +
Preference number: 4 (lower is better)
Translates to: RTLSQERPYGGPLEAQGACCMSG*RVCPWH
Trigger: GTGCCACGGGCACACTCTCCAACCTGACATGCAACA...TGCACCCTGCGCCTCCAGAGGTCCTCCGTAGGGTCTTTCTTGGGATAGTGTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp CGTTGCTGGGGGAAAACAGAATGGGTACTTGAGTCTGAAGCTTTAGTGGCCAGGCGCTGGGCATCCTGGTaGGCCTTCACCAGCAGTTGG +
Preference number: 4 (lower is better)
Translates to: RCWGKTEWVLESEALVARRWASW*AFTSSW
Trigger: CCAACTGCTGGTGAAGGCCCACCAGGATGCCCAGCG...CCTGGCCACTAAAGCTTCAGACTCAAGTACCCATTCTGTTTTCCCCCAGCAACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp AGAACACTATCCCAAGAAAGACCCTACGGAGGACCTCTGGAGGCGCAGGGTGCAGCGCTTCCGGTAGTCTaGGTTCTTGTCCTCGGAGAT +
Preference number: 4 (lower is better)
Translates to: RTLSQERPYGGPLEAQGAALPVV*VLVLGD
Trigger: ATCTCCGAGGACAAGAACCCAGACTACCGGAAGCGC...TGCACCCTGCGCCTCCAGAGGTCCTCCGTAGGGTCTTTCTTGGGATAGTGTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp AAAACAGAATGGGTACTTGAGTCTGAAGCTTTAGTGGCCAGGGCCACAGGGGCGCAAGGGGCACATCGCTaGAGTACATGGGGCGGTAGG +
Preference number: 4 (lower is better)
Translates to: KTEWVLESEALVARATGAQGAHR*STWGGR
Trigger: CCTACCGCCCCATGTACTCCAGCGATGTGCCCCTTG...CGCCCCTGTGGCCCTGGCCACTAAAGCTTCAGACTCAAGTACCCATTCTGTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp AAGAGAAAGCCCCTCACCACACACCAGAGGGGTCAGCCAAGAGCACTTCTCGGGCGCTGTAGGTGTCGATaGGGTAGTCTCCATCCATGT +
Preference number: 4 (lower is better)
Translates to: KRKPLTTHQRGQPRALLGRCRCR*GSLHPC
Trigger: ACATGGATGGAGACTACCCCATCGACACCTACAGCG...CCCGAGAAGTGCTCTTGGCTGACCCCTCTGGTGTGTGGTGAGGGGCTTTCTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp GGCACTTTTCTGTCTTGCCCCATCGCCTGCACGGAGAGCCTCTCAGATGAGGAATGGATTTTGGGGGTTTaGGTCTCGAACCTGGGCCCT +
Preference number: 4 (lower is better)
Translates to: GTFLSCPIACTESLSDEEWILGV*VSNLGP
Trigger: AGGGCCCAGGTTCGAGACCCAAACCCCCAAAATCCA...TTCCTCATCTGAGAGGCTCTCCGTGCAGGCGATGGGGCAAGACAGAAAAGTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp TGGAGGCCCTGGGGGCTTAGGGCAGTTGGTCGGTGGAGTTCAGTGAGAAAATCACCTGGAGAGAGAAGCTaGCATCTTCTGGAGCAGGTG +
Preference number: 4 (lower is better)
Translates to: WRPWGLRAVGRWSSVRKSPGERS*HLLEQV
Trigger: CACCTGCTCCAGAAGATGCCAGCTTCTCTCTCCAGG...TGATTTTCTCACTGAACTCCACCGACCAACTGCCCTAAGCCCCCAGGGCCTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp CGTTGCTGGGGGAAAACAGAATGGGTACTTGAGTCTGAAGCTTTAGTGGCCAGGGCTAGGGCAGCTGTGTaGGTGGGACAGGGGTGTGAG +
Preference number: 4 (lower is better)
Translates to: RCWGKTEWVLESEALVARARAAV*VGQGCE
Trigger: CTCACACCCCTGTCCCACCCACACAGCTGCCCTAGC...CCTGGCCACTAAAGCTTCAGACTCAAGTACCCATTCTGTTTTCCCCCAGCAACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR TCA 90 bp GAAAATCAGACCCAGAGAAGGAACCAAAGCCCTTCCGGGCCCAGGCAGCTGGAGTGGGGTTGTTCTTGTTaGGCAGGGGCACCATCTTTT +
Preference number: 4 (lower is better)
Translates to: ENQTQRRNQSPSGPRQLEWGCSC*AGAPSF
Trigger: AAAAGATGGTGCCCCTGCTCAACAAGAACAACCCCA...CTCCAGCTGCCTGGGCCCGGAAGGGCTTTGGTTCCTTCTCTGGGTCTGATTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR TCA 90 bp CTTCTGGAGCAGGTGACTCACTCCATATCTCCTCCCCATCTCCCCTGGACGGTCTGGGGTTGTTCTTGTTaGGCAGGGGCACCATCTTTT +
Preference number: 4 (lower is better)
Translates to: LLEQVTHSISPPHLPWTVWGCSC*AGAPSF
Trigger: AAAAGATGGTGCCCCTGCTCAACAAGAACAACCCCA...GACCGTCCAGGGGAGATGGGGAGGAGATATGGAGTGAGTCACCTGCTCCAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR TCA 90 bp AAAACAGAATGGGTACTTGAGTCTGAAGCTTTAGTGGCCAGGGCCACAGGGGCGACTGGTTGGGCTGGTTaGGCAGCTTCACGATGGCTG +
Preference number: 4 (lower is better)
Translates to: KTEWVLESEALVARATGATGWAG*AASRWL
Trigger: CAGCCATCGTGAAGCTGCTCAACCAGCCCAACCAGT...CGCCCCTGTGGCCCTGGCCACTAAAGCTTCAGACTCAAGTACCCATTCTGTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR TCA 90 bp CTTCTGGAGCAGGTGACTCACTCCATATCTCCTCCCCATCTCCCCTGGACGGTCCCCCTGGACGGTCCCTaGACTTTTCAAGAGAAGTTT +
Preference number: 4 (lower is better)
Translates to: LLEQVTHSISPPHLPWTVPLDGP*TFQEKF
Trigger: AAACTTCTCTTGAAAAGTTCAGGGACCGTCCAGGGG...GACCGTCCAGGGGAGATGGGGAGGAGATATGGAGTGAGTCACCTGCTCCAGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR GCA 90 bp AGTTCAGTGAGAAAATCAGACCCAGAGAAGGAACCAAAGCCCTTCCGGGCCCAGCCACATCTGAGAGGTTaGGCAGGGTCCACAGGCAGT +
Preference number: 4 (lower is better)
Translates to: SSVRKSDPEKEPKPFRAQPHLRG*AGSTGS
Trigger: ACTGCCTGTGGACCCTGCGCAACCTCTCAGATGTGG...CTGGGCCCGGAAGGGCTTTGGTTCCTTCTCTGGGTCTGATTTTCTCACTGAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR GCA 90 bp CGTTGCTGGGGGAAAACAGAATGGGTACTTGAGTCTGAAGCTTTAGTGGCCAGGTGTAGGGCTGCTGTGTaGCTGCAGCTACGTGGCGCT +
Preference number: 4 (lower is better)
Translates to: RCWGKTEWVLESEALVARCRAAV*LQLRGA
Trigger: AGCGCCACGTAGCTGCAGGCACACAGCAGCCCTACA...CCTGGCCACTAAAGCTTCAGACTCAAGTACCCATTCTGTTTTCCCCCAGCAACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR GCA 90 bp AAAACAGAATGGGTACTTGAGTCTGAAGCTTTAGTGGCCAGGGCCACAGGGGCGTGTGCAGTGCTCCGGTaGAGCCCTCCACAATCTCCT +
Preference number: 4 (lower is better)
Translates to: KTEWVLESEALVARATGACAVLR*SPPQSP
Trigger: AGGAGATTGTGGAGGGCTGCACCGGAGCACTGCACA...CGCCCCTGTGGCCCTGGCCACTAAAGCTTCAGACTCAAGTACCCATTCTGTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR GCA 90 bp CGTTGCTGGGGGAAAACAGAATGGGTACTTGAGTCTGAAGCTTTAGTGGCCAGGTGGCAGTGCCCTCGTTaGGGGAGTGCAGCAACTCCA +
Preference number: 4 (lower is better)
Translates to: RCWGKTEWVLESEALVARWQCPR*GSAATP
Trigger: TGGAGTTGCTGCACTCCCGCAACGAGGGCACTGCCA...CCTGGCCACTAAAGCTTCAGACTCAAGTACCCATTCTGTTTTCCCCCAGCAACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR GCA 90 bp AGAACACTATCCCAAGAAAGACCCTACGGAGGACCTCTGGAGGCGCAGGGTGCACCCAAAAAGCCTTCCTaGGGTCTCACTTTCCCTGTC +
Preference number: 4 (lower is better)
Translates to: RTLSQERPYGGPLEAQGAPKKPS*GLTFPV
Trigger: GACAGGGAAAGTGAGACCGCAGGAAGGCTTTTTGGG...TGCACCCTGCGCCTCCAGAGGTCCTCCGTAGGGTCTTTCTTGGGATAGTGTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393930.5
CDS-3UTR CCA 90 bp AGTGAGAAAATCAGACCCAGAGAAGGAACCAAAGCCCTTCCGGGCCCAGGCAGCTCATCACCTCCATCGTaGCTACTGAGTATGGGGCCT +
Preference number: 4 (lower is better)
Translates to: SEKIRPREGTKALPGPGSSSPPS*LLSMGP
Trigger: AGGCCCCATACTCAGTAGCCACGATGGAGGTGATGA...GCTGCCTGGGCCCGGAAGGGCTTTGGTTCCTTCTCTGGGTCTGATTTTCTCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310706.9
ENST00000393931.8
CDS-3UTR CCA 90 bp GAAAATCAGACCCAGAGAAGGAACCAAAGCCCTTCCGGGCCCAGGCAGCTGGAGGCTGTTGTGGACATCTaGTACTCCAGATCACCTTGG +
Preference number: 4 (lower is better)
Translates to: ENQTQRRNQSPSGPRQLEAVVDI*YSRSPW
Trigger: CCAAGGTGATCTGGAGTACCAGATGTCCACAACAGC...CTCCAGCTGCCTGGGCCCGGAAGGGCTTTGGTTCCTTCTCTGGGTCTGATTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp TGGAGGCCCTGGGGGCTTAGGGCAGTTGGTCGGTGGAGTTCAGTGAGAAAATCATGGCCCTGGCTGTTGTaGACATCTGGTACTCCAGAT +
Preference number: 4 (lower is better)
Translates to: WRPWGLRAVGRWSSVRKSWPWLL*TSGTPD
Trigger: ATCTGGAGTACCAGATGTCCACAACAGCCAGGGCCA...TGATTTTCTCACTGAACTCCACCGACCAACTGCCCTAAGCCCCCAGGGCCTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp CGTTGCTGGGGGAAAACAGAATGGGTACTTGAGTCTGAAGCTTTAGTGGCCAGGCAATCATGGCCGCCTTaGTCACCACCACCGGGTCCT +
Preference number: 4 (lower is better)
Translates to: RCWGKTEWVLESEALVARQSWPP*SPPPGP
Trigger: AGGACCCGGTGGTGGTGACCAAGGCGGCCATGATTG...CCTGGCCACTAAAGCTTCAGACTCAAGTACCCATTCTGTTTTCCCCCAGCAACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp AGTTCAGTGAGAAAATCAGACCCAGAGAAGGAACCAAAGCCCTTCCGGGCCCAGCGCTGGTATTCTGCATaGTACGCACGACAGCGGCCA +
Preference number: 4 (lower is better)
Translates to: SSVRKSDPEKEPKPFRAQRWYSA*YARQRP
Trigger: TGGCCGCTGTCGTGCGTACCATGCAGAATACCAGCG...CTGGGCCCGGAAGGGCTTTGGTTCCTTCTCTGGGTCTGATTTTCTCACTGAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp AGTGAGAAAATCAGACCCAGAGAAGGAACCAAAGCCCTTCCGGGCCCAGGCAGCCTGTGTCCAGGTCGCTaGTATTCTGCATGGTACGCA +
Preference number: 4 (lower is better)
Translates to: SEKIRPREGTKALPGPGSLCPGR*YSAWYA
Trigger: TGCGTACCATGCAGAATACCAGCGACCTGGACACAG...GCTGCCTGGGCCCGGAAGGGCTTTGGTTCCTTCTCTGGGTCTGATTTTCTCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp CCCTGGGGGCTTAGGGCAGTTGGTCGGTGGAGTTCAGTGAGAAAATCAGACCCACAGCTTCACGATGGCTaGGATGCCATAGTTGAGACG +
Preference number: 4 (lower is better)
Translates to: PWGLRAVGRWSSVRKSDPQLHDG*DAIVET
Trigger: CGTCTCAACTATGGCATCCCAGCCATCGTGAAGCTG...TGGGTCTGATTTTCTCACTGAACTCCACCGACCAACTGCCCTAAGCCCCCAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp AGTGAGAAAATCAGACCCAGAGAAGGAACCAAAGCCCTTCCGGGCCCAGGCAGCCAGCTTCACGATGGCTaGGATGCCATAGTTGAGACG +
Preference number: 4 (lower is better)
Translates to: SEKIRPREGTKALPGPGSQLHDG*DAIVET
Trigger: CGTCTCAACTATGGCATCCCAGCCATCGTGAAGCTG...GCTGCCTGGGCCCGGAAGGGCTTTGGTTCCTTCTCTGGGTCTGATTTTCTCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp AAAACAGAATGGGTACTTGAGTCTGAAGCTTTAGTGGCCAGGGCCACAGGGGCGGGTTGCCTTGACCAGTaGCCACTGGTTGGGCTGGTT +
Preference number: 4 (lower is better)
Translates to: KTEWVLESEALVARATGAGCLDQ*PLVGLV
Trigger: AACCAGCCCAACCAGTGGCCACTGGTCAAGGCAACC...CGCCCCTGTGGCCCTGGCCACTAAAGCTTCAGACTCAAGTACCCATTCTGTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp CGTTGCTGGGGGAAAACAGAATGGGTACTTGAGTCTGAAGCTTTAGTGGCCAGGTCTCCATGCGGTTCATaGGGTCCCGGGCGAGGATGT +
Preference number: 4 (lower is better)
Translates to: RCWGKTEWVLESEALVARSPCGS*GPGRGC
Trigger: ACATCCTCGCCCGGGACCCCATGAACCGCATGGAGA...CCTGGCCACTAAAGCTTCAGACTCAAGTACCCATTCTGTTTTCCCCCAGCAACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp GGGAAAACAGAATGGGTACTTGAGTCTGAAGCTTTAGTGGCCAGGGCCACAGGGCATCGCTGGAGTACATaGGGCGGTAGGTGGCATCCA +
Preference number: 4 (lower is better)
Translates to: GKTEWVLESEALVARATGHRWST*GGRWHP
Trigger: TGGATGCCACCTACCGCCCCATGTACTCCAGCGATG...CCCTGTGGCCCTGGCCACTAAAGCTTCAGACTCAAGTACCCATTCTGTTTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp AGAACACTATCCCAAGAAAGACCCTACGGAGGACCTCTGGAGGCGCAGGGTGCACGCTGTAGGTGTCGATaGGGTAGTCTCCATCCATGT +
Preference number: 4 (lower is better)
Translates to: RTLSQERPYGGPLEAQGARCRCR*GSLHPC
Trigger: ACATGGATGGAGACTACCCCATCGACACCTACAGCG...TGCACCCTGCGCCTCCAGAGGTCCTCCGTAGGGTCTTTCTTGGGATAGTGTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp GAATGGGTACTTGAGTCTGAAGCTTTAGTGGCCAGGGCCACAGGGGCGGGGAGGAGGGCAGTTGGTCGGTaGAGTTCAGTGAGAAAATCA +
Preference number: 4 (lower is better)
Translates to: EWVLESEALVARATGAGRRAVGR*SSVRKS
Trigger: TGATTTTCTCACTGAACTCCACCGACCAACTGCCCT...CCTCCCCGCCCCTGTGGCCCTGGCCACTAAAGCTTCAGACTCAAGTACCCATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR TCA 90 bp CCCTGGGGGCTTAGGGCAGTTGGTCGGTGGAGTTCAGTGAGAAAATCAGACCCATGGGGTTGTTCTTGTTaGGCAGGGGCACCATCTTTT +
Preference number: 4 (lower is better)
Translates to: PWGLRAVGRWSSVRKSDPWGCSC*AGAPSF
Trigger: AAAAGATGGTGCCCCTGCTCAACAAGAACAACCCCA...TGGGTCTGATTTTCTCACTGAACTCCACCGACCAACTGCCCTAAGCCCCCAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR TCA 90 bp AGTTCAGTGAGAAAATCAGACCCAGAGAAGGAACCAAAGCCCTTCCGGGCCCAGCACCATTGGCCAGGATaGTCAGCTTGCTCTCCTGGT +
Preference number: 4 (lower is better)
Translates to: SSVRKSDPEKEPKPFRAQHHWPG*SACSPG
Trigger: ACCAGGAGAGCAAGCTGATCATCCTGGCCAATGGTG...CTGGGCCCGGAAGGGCTTTGGTTCCTTCTCTGGGTCTGATTTTCTCACTGAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR TCA 90 bp GAAAATCAGACCCAGAGAAGGAACCAAAGCCCTTCCGGGCCCAGGCAGCTGGAGTCATCCACACTCAGCTaGTTCACCAGAATCTTCAGC +
Preference number: 4 (lower is better)
Translates to: ENQTQRRNQSPSGPRQLESSTLS*FTRIFS
Trigger: GCTGAAGATTCTGGTGAATCAGCTGAGTGTGGATGA...CTCCAGCTGCCTGGGCCCGGAAGGGCTTTGGTTCCTTCTCTGGGTCTGATTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR TCA 90 bp AGAACACTATCCCAAGAAAGACCCTACGGAGGACCTCTGGAGGCGCAGGGTGCAGTCGGTGGAGTTCAGTaGGAAAATCAGACCCAGAGA +
Preference number: 4 (lower is better)
Translates to: RTLSQERPYGGPLEAQGAVGGVQ*ENQTQR
Trigger: TCTCTGGGTCTGATTTTCTCACTGAACTCCACCGAC...TGCACCCTGCGCCTCCAGAGGTCCTCCGTAGGGTCTTTCTTGGGATAGTGTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR TCA 90 bp CCCTGGGGGCTTAGGGCAGTTGGTCGGTGGAGTTCAGTGAGAAAATCAGACCCAGTCGGTGGAGTTCAGTaGGAAAATCAGACCCAGAGA +
Preference number: 4 (lower is better)
Translates to: PWGLRAVGRWSSVRKSDPVGGVQ*ENQTQR
Trigger: TCTCTGGGTCTGATTTTCTCACTGAACTCCACCGAC...TGGGTCTGATTTTCTCACTGAACTCCACCGACCAACTGCCCTAAGCCCCCAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR TCA 90 bp GGCACTTTTCTGTCTTGCCCCATCGCCTGCACGGAGAGCCTCTCAGATGAGGAACCCCTGGACGGTCCCTaGACTTTTCAAGAGAAGTTT +
Preference number: 4 (lower is better)
Translates to: GTFLSCPIACTESLSDEEPLDGP*TFQEKF
Trigger: AAACTTCTCTTGAAAAGTTCAGGGACCGTCCAGGGG...TTCCTCATCTGAGAGGCTCTCCGTGCAGGCGATGGGGCAAGACAGAAAAGTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR GCA 90 bp AGTTCAGTGAGAAAATCAGACCCAGAGAAGGAACCAAAGCCCTTCCGGGCCCAGAGGTCGCTGGTATTCTaGATGGTACGCACGACAGCG +
Preference number: 4 (lower is better)
Translates to: SSVRKSDPEKEPKPFRAQRSLVF*MVRTTA
Trigger: CGCTGTCGTGCGTACCATGCAGAATACCAGCGACCT...CTGGGCCCGGAAGGGCTTTGGTTCCTTCTCTGGGTCTGATTTTCTCACTGAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR GCA 90 bp AAAACAGAATGGGTACTTGAGTCTGAAGCTTTAGTGGCCAGGGCCACAGGGGCGAGGTCGCTGGTATTCTaGATGGTACGCACGACAGCG +
Preference number: 4 (lower is better)
Translates to: KTEWVLESEALVARATGARSLVF*MVRTTA
Trigger: CGCTGTCGTGCGTACCATGCAGAATACCAGCGACCT...CGCCCCTGTGGCCCTGGCCACTAAAGCTTCAGACTCAAGTACCCATTCTGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR GCA 90 bp AGTGAGAAAATCAGACCCAGAGAAGGAACCAAAGCCCTTCCGGGCCCAGGCAGCCAATGGCAGGCTTATTaGTGGGACACACGGATAGCA +
Preference number: 4 (lower is better)
Translates to: SEKIRPREGTKALPGPGSQWQAY*WDTRIA
Trigger: TGCTATCCGTGTGTCCCAGCAATAAGCCTGCCATTG...GCTGCCTGGGCCCGGAAGGGCTTTGGTTCCTTCTCTGGGTCTGATTTTCTCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR GCA 90 bp AAGAGAAAGCCCCTCACCACACACCAGAGGGGTCAGCCAAGAGCACTTCTCGGGCCAGCGTCTTGTTCTTaGTGTTGTTGCATGTCAGGT +
Preference number: 4 (lower is better)
Translates to: KRKPLTTHQRGQPRALLGPASCS*CCCMSG
Trigger: ACCTGACATGCAACAACAGCAAGAACAAGACGCTGG...CCCGAGAAGTGCTCTTGGCTGACCCCTCTGGTGTGTGGTGAGGGGCTTTCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR GCA 90 bp AGTTCAGTGAGAAAATCAGACCCAGAGAAGGAACCAAAGCCCTTCCGGGCCCAGCCATCCATGTCCATGTaGATCTCCAGCGGGTCAAGG +
Preference number: 4 (lower is better)
Translates to: SSVRKSDPEKEPKPFRAQPSMSM*ISSGSR
Trigger: CCTTGACCCGCTGGAGATGCACATGGACATGGATGG...CTGGGCCCGGAAGGGCTTTGGTTCCTTCTCTGGGTCTGATTTTCTCACTGAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR GCA 90 bp AGTTCAGTGAGAAAATCAGACCCAGAGAAGGAACCAAAGCCCTTCCGGGCCCAGGGCCCGATGCAGCTCTaGCTGAGAGAGTCTAGCATT +
Preference number: 4 (lower is better)
Translates to: SSVRKSDPEKEPKPFRAQGPMQL*LRESSI
Trigger: AATGCTAGACTCTCTCAGGCAGAGCTGCATCGGGCC...CTGGGCCCGGAAGGGCTTTGGTTCCTTCTCTGGGTCTGATTTTCTCACTGAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393930.5
CDS-3UTR CCA 90 bp CCCTGGGGGCTTAGGGCAGTTGGTCGGTGGAGTTCAGTGAGAAAATCAGACCCAGCTGTTGTGGACATCTaGTACTCCAGATCACCTTGG +
Preference number: 4 (lower is better)
Translates to: PWGLRAVGRWSSVRKSDPAVVDI*YSRSPW
Trigger: CCAAGGTGATCTGGAGTACCAGATGTCCACAACAGC...TGGGTCTGATTTTCTCACTGAACTCCACCGACCAACTGCCCTAAGCCCCCAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp CGTTGCTGGGGGAAAACAGAATGGGTACTTGAGTCTGAAGCTTTAGTGGCCAGGGCACCCGTTTGGCCCTaGCTGTTGTGGACATCTGGT +
Preference number: 4 (lower is better)
Translates to: RCWGKTEWVLESEALVARAPVWP*LLWTSG
Trigger: ACCAGATGTCCACAACAGCCAGGGCCAAACGGGTGC...CCTGGCCACTAAAGCTTCAGACTCAAGTACCCATTCTGTTTTCCCCCAGCAACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp GGGAAAACAGAATGGGTACTTGAGTCTGAAGCTTTAGTGGCCAGGGCCACAGGGTGTTGCATGTCAGGTTaGAGAGTGTGCCCGTGGCAC +
Preference number: 4 (lower is better)
Translates to: GKTEWVLESEALVARATGCCMSG*RVCPWH
Trigger: GTGCCACGGGCACACTCTCCAACCTGACATGCAACA...CCCTGTGGCCCTGGCCACTAAAGCTTCAGACTCAAGTACCCATTCTGTTTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp CGTTGCTGGGGGAAAACAGAATGGGTACTTGAGTCTGAAGCTTTAGTGGCCAGGGGTTGCCTTGACCAGTaGCCACTGGTTGGGCTGGTT +
Preference number: 4 (lower is better)
Translates to: RCWGKTEWVLESEALVARGCLDQ*PLVGLV
Trigger: AACCAGCCCAACCAGTGGCCACTGGTCAAGGCAACC...CCTGGCCACTAAAGCTTCAGACTCAAGTACCCATTCTGTTTTCCCCCAGCAACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp GAAAATCAGACCCAGAGAAGGAACCAAAGCCCTTCCGGGCCCAGGCAGCTGGAGAGGGCAGTTGGTCGGTaGAGTTCAGTGAGAAAATCA +
Preference number: 4 (lower is better)
Translates to: ENQTQRRNQSPSGPRQLERAVGR*SSVRKS
Trigger: TGATTTTCTCACTGAACTCCACCGACCAACTGCCCT...CTCCAGCTGCCTGGGCCCGGAAGGGCTTTGGTTCCTTCTCTGGGTCTGATTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp AAGAGAAAGCCCCTCACCACACACCAGAGGGGTCAGCCAAGAGCACTTCTCGGGAGGGCAGTTGGTCGGTaGAGTTCAGTGAGAAAATCA +
Preference number: 4 (lower is better)
Translates to: KRKPLTTHQRGQPRALLGRAVGR*SSVRKS
Trigger: TGATTTTCTCACTGAACTCCACCGACCAACTGCCCT...CCCGAGAAGTGCTCTTGGCTGACCCCTCTGGTGTGTGGTGAGGGGCTTTCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp AGAACACTATCCCAAGAAAGACCCTACGGAGGACCTCTGGAGGCGCAGGGTGCATCATCACCTCCATCGTaGCTACCTGATCAAGATCCC +
Preference number: 4 (lower is better)
Translates to: RTLSQERPYGGPLEAQGASSPPS*LPDQDP
Trigger: GGGATCTTGATCAGGTAGCCACGATGGAGGTGATGA...TGCACCCTGCGCCTCCAGAGGTCCTCCGTAGGGTCTTTCTTGGGATAGTGTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393930.5
CDS-3UTR TCA 90 bp AAAACAGAATGGGTACTTGAGTCTGAAGCTTTAGTGGCCAGGGCCACAGGGGCGCGATGCAGCTCTGCCTaGGAGAGTCTAGCATTGAAG +
Preference number: 4 (lower is better)
Translates to: KTEWVLESEALVARATGARCSSA*ESLALK
Trigger: CTTCAATGCTAGACTCTCTCAGGCAGAGCTGCATCG...CGCCCCTGTGGCCCTGGCCACTAAAGCTTCAGACTCAAGTACCCATTCTGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393930.5
CDS-3UTR GCA 90 bp GGCACTTTTCTGTCTTGCCCCATCGCCTGCACGGAGAGCCTCTCAGATGAGGAACCAGCGTCTTGTTCTTaGTGTTGTTGCATGTCAGGT +
Preference number: 4 (lower is better)
Translates to: GTFLSCPIACTESLSDEEPASCS*CCCMSG
Trigger: ACCTGACATGCAACAACAGCAAGAACAAGACGCTGG...TTCCTCATCTGAGAGGCTCTCCGTGCAGGCGATGGGGCAAGACAGAAAAGTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR GCA 90 bp TGGAGGCCCTGGGGGCTTAGGGCAGTTGGTCGGTGGAGTTCAGTGAGAAAATCAAATAATAAAACACTCTaGTTGGACCTCCCCCAGCCC +
Preference number: 4 (lower is better)
Translates to: WRPWGLRAVGRWSSVRKSNNKTL*LDLPQP
Trigger: GGGCTGGGGGAGGTCCAAGCAGAGTGTTTTATTATT...TGATTTTCTCACTGAACTCCACCGACCAACTGCCCTAAGCCCCCAGGGCCTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp AAAACAGAATGGGTACTTGAGTCTGAAGCTTTAGTGGCCAGGGCCACAGGGGCGTCATCACCTCCATCGTaGCTACTGAGTATGGGGCCT +
Preference number: 4 (lower is better)
Translates to: KTEWVLESEALVARATGASSPPS*LLSMGP
Trigger: AGGCCCCATACTCAGTAGCCACGATGGAGGTGATGA...CGCCCCTGTGGCCCTGGCCACTAAAGCTTCAGACTCAAGTACCCATTCTGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310706.9
ENST00000393931.8
CDS-3UTR CCA 90 bp AGTTCAGTGAGAAAATCAGACCCAGAGAAGGAACCAAAGCCCTTCCGGGCCCAGTCCTTCTTCGACAGCTaGTTCACAATCATGGCCGCC +
Preference number: 4 (lower is better)
Translates to: SSVRKSDPEKEPKPFRAQSFFDS*FTIMAA
Trigger: GGCGGCCATGATTGTGAACCAGCTGTCGAAGAAGGA...CTGGGCCCGGAAGGGCTTTGGTTCCTTCTCTGGGTCTGATTTTCTCACTGAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp AAAACAGAATGGGTACTTGAGTCTGAAGCTTTAGTGGCCAGGGCCACAGGGGCGCAGCTTCACGATGGCTaGGATGCCATAGTTGAGACG +
Preference number: 4 (lower is better)
Translates to: KTEWVLESEALVARATGAQLHDG*DAIVET
Trigger: CGTCTCAACTATGGCATCCCAGCCATCGTGAAGCTG...CGCCCCTGTGGCCCTGGCCACTAAAGCTTCAGACTCAAGTACCCATTCTGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp CGTTGCTGGGGGAAAACAGAATGGGTACTTGAGTCTGAAGCTTTAGTGGCCAGGGCGCTTCCGGTAGTCTaGGTTCTTGTCCTCGGAGAT +
Preference number: 4 (lower is better)
Translates to: RCWGKTEWVLESEALVARALPVV*VLVLGD
Trigger: ATCTCCGAGGACAAGAACCCAGACTACCGGAAGCGC...CCTGGCCACTAAAGCTTCAGACTCAAGTACCCATTCTGTTTTCCCCCAGCAACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp AGTTCAGTGAGAAAATCAGACCCAGAGAAGGAACCAAAGCCCTTCCGGGCCCAGACATGGGGCGGTAGGTaGCATCCATGTCATCTCCAT +
Preference number: 4 (lower is better)
Translates to: SSVRKSDPEKEPKPFRAQTWGGR*HPCHLH
Trigger: ATGGAGATGACATGGATGCCACCTACCGCCCCATGT...CTGGGCCCGGAAGGGCTTTGGTTCCTTCTCTGGGTCTGATTTTCTCACTGAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp AAAACAGAATGGGTACTTGAGTCTGAAGCTTTAGTGGCCAGGGCCACAGGGGCGCGCTGTAGGTGTCGATaGGGTAGTCTCCATCCATGT +
Preference number: 4 (lower is better)
Translates to: KTEWVLESEALVARATGARCRCR*GSLHPC
Trigger: ACATGGATGGAGACTACCCCATCGACACCTACAGCG...CGCCCCTGTGGCCCTGGCCACTAAAGCTTCAGACTCAAGTACCCATTCTGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR TCA 90 bp CGTTGCTGGGGGAAAACAGAATGGGTACTTGAGTCTGAAGCTTTAGTGGCCAGGCTCCATAGGGCTCATTaGTGGGAATCATGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: RCWGKTEWVLESEALVARLHRAH*WESCSG
Trigger: CCCAGAGCATGATTCCCATCAATGAGCCCTATGGAG...CCTGGCCACTAAAGCTTCAGACTCAAGTACCCATTCTGTTTTCCCCCAGCAACG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR TCA 90 bp GGGAAAACAGAATGGGTACTTGAGTCTGAAGCTTTAGTGGCCAGGGCCACAGGGCCCCTGGACGGTCCCTaGACTTTTCAAGAGAAGTTT +
Preference number: 4 (lower is better)
Translates to: GKTEWVLESEALVARATGPLDGP*TFQEKF
Trigger: AAACTTCTCTTGAAAAGTTCAGGGACCGTCCAGGGG...CCCTGTGGCCCTGGCCACTAAAGCTTCAGACTCAAGTACCCATTCTGTTTTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR GCA 90 bp AGTTCAGTGAGAAAATCAGACCCAGAGAAGGAACCAAAGCCCTTCCGGGCCCAGGTCACCTTGATAGGCTaGTCCATCAGGTTCATCACC +
Preference number: 4 (lower is better)
Translates to: SSVRKSDPEKEPKPFRAQVTLIG*SIRFIT
Trigger: GGTGATGAACCTGATGGAGCAGCCTATCAAGGTGAC...CTGGGCCCGGAAGGGCTTTGGTTCCTTCTCTGGGTCTGATTTTCTCACTGAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR GCA 90 bp GGGAAAACAGAATGGGTACTTGAGTCTGAAGCTTTAGTGGCCAGGGCCACAGGGGTCACCTTGATAGGCTaGTCCATCAGGTTCATCACC +
Preference number: 4 (lower is better)
Translates to: GKTEWVLESEALVARATGVTLIG*SIRFIT
Trigger: GGTGATGAACCTGATGGAGCAGCCTATCAAGGTGAC...CCCTGTGGCCCTGGCCACTAAAGCTTCAGACTCAAGTACCCATTCTGTTTTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR GCA 90 bp GGGAAAACAGAATGGGTACTTGAGTCTGAAGCTTTAGTGGCCAGGGCCACAGGGCAATGGCAGGCTTATTaGTGGGACACACGGATAGCA +
Preference number: 4 (lower is better)
Translates to: GKTEWVLESEALVARATGQWQAY*WDTRIA
Trigger: TGCTATCCGTGTGTCCCAGCAATAAGCCTGCCATTG...CCCTGTGGCCCTGGCCACTAAAGCTTCAGACTCAAGTACCCATTCTGTTTTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR GCA 90 bp AAAACAGAATGGGTACTTGAGTCTGAAGCTTTAGTGGCCAGGGCCACAGGGGCGCAATGGCAGGCTTATTaGTGGGACACACGGATAGCA +
Preference number: 4 (lower is better)
Translates to: KTEWVLESEALVARATGAQWQAY*WDTRIA
Trigger: TGCTATCCGTGTGTCCCAGCAATAAGCCTGCCATTG...CGCCCCTGTGGCCCTGGCCACTAAAGCTTCAGACTCAAGTACCCATTCTGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp CGTTGCTGGGGGAAAACAGAATGGGTACTTGAGTCTGAAGCTTTAGTGGCCAGGTGGCCCTGGCTGTTGTaGACATCTGGTACTCCAGAT +
Preference number: 4 (lower is better)
Translates to: RCWGKTEWVLESEALVARWPWLL*TSGTPD
Trigger: ATCTGGAGTACCAGATGTCCACAACAGCCAGGGCCA...CCTGGCCACTAAAGCTTCAGACTCAAGTACCCATTCTGTTTTCCCCCAGCAACG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp CGTTGCTGGGGGAAAACAGAATGGGTACTTGAGTCTGAAGCTTTAGTGGCCAGGCTGTGTCCAGGTCGCTaGTATTCTGCATGGTACGCA +
Preference number: 4 (lower is better)
Translates to: RCWGKTEWVLESEALVARLCPGR*YSAWYA
Trigger: TGCGTACCATGCAGAATACCAGCGACCTGGACACAG...CCTGGCCACTAAAGCTTCAGACTCAAGTACCCATTCTGTTTTCCCCCAGCAACG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp AGTGAGAAAATCAGACCCAGAGAAGGAACCAAAGCCCTTCCGGGCCCAGGCAGCTGGGGGAAAACAGAATaGGTACTTGAGTCTGAAGCT +
Preference number: 4 (lower is better)
Translates to: SEKIRPREGTKALPGPGSWGKTE*VLESEA
Trigger: AGCTTCAGACTCAAGTACCCATTCTGTTTTCCCCCA...GCTGCCTGGGCCCGGAAGGGCTTTGGTTCCTTCTCTGGGTCTGATTTTCTCACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR GCA 90 bp GGGAAAACAGAATGGGTACTTGAGTCTGAAGCTTTAGTGGCCAGGGCCACAGGGCCAGCGTCTTGTTCTTaGTGTTGTTGCATGTCAGGT +
Preference number: 4 (lower is better)
Translates to: GKTEWVLESEALVARATGPASCS*CCCMSG
Trigger: ACCTGACATGCAACAACAGCAAGAACAAGACGCTGG...CCCTGTGGCCCTGGCCACTAAAGCTTCAGACTCAAGTACCCATTCTGTTTTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR TCA 90 bp CGTTGCTGGGGGAAAACAGAATGGGTACTTGAGTCTGAAGCTTTAGTGGCCAGGTCATCCACACTCAGCTaGTTCACCAGAATCTTCAGC +
Preference number: 4 (lower is better)
Translates to: RCWGKTEWVLESEALVARSSTLS*FTRIFS
Trigger: GCTGAAGATTCTGGTGAATCAGCTGAGTGTGGATGA...CCTGGCCACTAAAGCTTCAGACTCAAGTACCCATTCTGTTTTCCCCCAGCAACG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR GCA 90 bp CGTTGCTGGGGGAAAACAGAATGGGTACTTGAGTCTGAAGCTTTAGTGGCCAGGAATAATAAAACACTCTaGTTGGACCTCCCCCAGCCC +
Preference number: 4 (lower is better)
Translates to: RCWGKTEWVLESEALVARNNKTL*LDLPQP
Trigger: GGGCTGGGGGAGGTCCAAGCAGAGTGTTTTATTATT...CCTGGCCACTAAAGCTTCAGACTCAAGTACCCATTCTGTTTTCCCCCAGCAACG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CCA 90 bp AGTTCAGTGAGAAAATCAGACCCAGAGAAGGAACCAAAGCCCTTCCGGGCCCAGTGGGGGAAAACAGAATaGGTACTTGAGTCTGAAGCT +
Preference number: 4 (lower is better)
Translates to: SSVRKSDPEKEPKPFRAQWGKTE*VLESEA
Trigger: AGCTTCAGACTCAAGTACCCATTCTGTTTTCCCCCA...CTGGGCCCGGAAGGGCTTTGGTTCCTTCTCTGGGTCTGATTTTCTCACTGAACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR GCA 90 bp CGTTGCTGGGGGAAAACAGAATGGGTACTTGAGTCTGAAGCTTTAGTGGCCAGGTGTTCTTGCTGTTGTTaGATGTCAGGTTGGAGAGTG +
Preference number: 4 (lower is better)
Translates to: RCWGKTEWVLESEALVARCSCCC*MSGWRV
Trigger: CACTCTCCAACCTGACATGCAACAACAGCAAGAACA...CCTGGCCACTAAAGCTTCAGACTCAAGTACCCATTCTGTTTTCCCCCAGCAACG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS TCA 90 bp CGGGTCGGGGTCGGGCCGGGGTGGGAGCCGGCGCGGACAGCGAACTaGGCTCGGCGTGGTCGGGCGGCGGCTGCTCCGGACTCTGGCCAA +
Preference number: 5 (lower is better)
Translates to: RVGVGPGWEPARTAN*ARRGRAAAAPDSGQ
Trigger: TTGGCCAGAGTCCGGAGCAGCCGCCGCCCGACCACGCCGAGCTCAGTTCGCTGTCCGCGCCGGCTCCCACCCCGGCCCGACCCCGACCCG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393931.8
ENST00000424457.5
ENST00000589036.1
ENST00000591690.5
CDS CCA 90 bp CGGGCCGGGGTGGGAGCCGGCGCGGACAGCGAACTGAGCTCGGCGTaGTCGGGCGGCGGCTGCTCCGGACTCTGGCCAAGGCAGCAACTC +
Preference number: 5 (lower is better)
Translates to: RAGVGAGADSELSSA*SGGGCSGLWPRQQL
Trigger: GAGTTGCTGCCTTGGCCAGAGTCCGGAGCAGCCGCCGCCCGACCACGCCGAGCTCAGTTCGCTGTCCGCGCCGGCTCCCACCCCGGCCCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393931.8
ENST00000424457.5
ENST00000591690.5
CDS TCA 90 bp CTGCCCCTCCACCTGGGTGGCCAGCAGAAGCGAGCTGTCCTCGCCTaGCACACCAGGGCACATGGCCTCCCGCACCCGTTTGGCCCTGGC +
Preference number: 5 (lower is better)
Translates to: LPLHLGGQQKRAVLA*HTRAHGLPHPFGPG
Trigger: GCCAGGGCCAAACGGGTGCGGGAGGCCATGTGCCCTGGTGTGTCAGGCGAGGACAGCTCGCTTCTGCTGGCCACCCAGGTGGAGGGGCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
ENST00000420370.5
ENST00000424457.5
ENST00000437187.5
ENST00000449889.5
CDS TCA 90 bp GGGCATCCTGGTGGGCCTTCACCAGCAGTTGGACGAGGCGGGGGATaGCCGCTGCCTCCTGCAGCGGGGCATGGTTGGCTGGGCACAGGG +
Preference number: 5 (lower is better)
Translates to: GHPGGPSPAVGRGGG*PLPPAAGHGWLGTG
Trigger: CCCTGTGCCCAGCCAACCATGCCCCGCTGCAGGAGGCAGCGGTCATCCCCCGCCTCGTCCAACTGCTGGTGAAGGCCCACCAGGATGCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
ENST00000585793.1
CDS CCA 90 bp GCCGAGGCCCCCTCTGCATCAATGGCGTCGGCCGCCTCCTTGTCCTaGGCCAGCTCACACAGCACCCCGGCAGCCACGCGCTGGATGTTC +
Preference number: 5 (lower is better)
Translates to: AEAPSASMASAASLS*ASSHSTPAATRWMF
Trigger: GAACATCCAGCGCGTGGCTGCCGGGGTGCTGTGTGAGCTGGCCCAGGACAAGGAGGCGGCCGACGCCATTGATGCAGAGGGGGCCTCGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS GCA 90 bp TTGAGCAGCTGGGACGGCTCGGCCAGTCGCTGCAGGTTGGTGGCCTaGCCCTCCACCTGGGTGGCCAGCAGAAGCGAGCTGTCCTCGCCT +
Preference number: 5 (lower is better)
Translates to: LSSWDGSASRCRLVA*PSTWVASRSELSSP
Trigger: AGGCGAGGACAGCTCGCTTCTGCTGGCCACCCAGGTGGAGGGGCAGGCCACCAACCTGCAGCGACTGGCCGAGCCGTCCCAGCTGCTCAA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
ENST00000420370.5
ENST00000424457.5
ENST00000437187.5
ENST00000449889.5
CDS CCA 90 bp GCTCGGCCAGTCGCTGCAGGTTGGTGGCCTGCCCCTCCACCTGGGTaGCCAGCAGAAGCGAGCTGTCCTCGCCTGACACACCAGGGCACA +
Preference number: 5 (lower is better)
Translates to: ARPVAAGWWPAPPPG*PAEASCPRLTHQGT
Trigger: TGTGCCCTGGTGTGTCAGGCGAGGACAGCTCGCTTCTGCTGGCCACCCAGGTGGAGGGGCAGGCCACCAACCTGCAGCGACTGGCCGAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
ENST00000420370.5
ENST00000424457.5
ENST00000437187.5
ENST00000449889.5
CDS CCA 90 bp CGTGGCTACTCCGCTGAAGAAGCCAGAGCCGGGCTCCCACCGGCGTaGAGGGAGGCGCCGCAGGTAGTATCGACGAGGCTCTGGGAGCTG +
Preference number: 5 (lower is better)
Translates to: RGYSAEEARAGLPPA*REAPQVVSTRLWEL
Trigger: CAGCTCCCAGAGCCTCGTCGATACTACCTGCGGCGCCTCCCTCCACGCCGGTGGGAGCCCGGCTCTGGCTTCTTCAGCGGAGTAGCCACG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449889.5
CDS CCA 90 bp GGAGGGCAGGGCCTCTGGACTCCGTGCGCTCACCTGCTCGGCAGGTaGGGCCAGAGTCGCTGGGAAAATGTGCGCTCGGCCCCCACAGTT +
Preference number: 5 (lower is better)
Translates to: GGQGLWTPCAHLLGR*GQSRWENVRSAPTV
Trigger: AACTGTGGGGGCCGAGCGCACATTTTCCCAGCGACTCTGGCCCCACCTGCCGAGCAGGTGAGCGCACGGAGTCCAGAGGCCCTGCCCTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000465293.1
CDS CCA 90 bp GTCAGAGGCTCCGCTGAAGAAGCCAGAGCCGGGCTCCCACCGGCGTaGAGGGAGGCGCCGCAGGTAGTATCGACGAGGCTCTGGGAGCTG +
Preference number: 5 (lower is better)
Translates to: VRGSAEEARAGLPPA*REAPQVVSTRLWEL
Trigger: CAGCTCCCAGAGCCTCGTCGATACTACCTGCGGCGCCTCCCTCCACGCCGGTGGGAGCCCGGCTCTGGCTTCTTCAGCGGAGCCTCTGAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465293.1
CDS TCA 90 bp CAGCGTAGGTGGCAGTGCCCTCGTTGCGGGAGTGCAGCAACTCCATaGGTGGGGCCGAGGCCCCCTCTGCATCAATGGCGTCGGCCGCCT +
Preference number: 5 (lower is better)
Translates to: QRRWQCPRCGSAATP*VGPRPPLHQWRRPP
Trigger: AGGCGGCCGACGCCATTGATGCAGAGGGGGCCTCGGCCCCACTCATGGAGTTGCTGCACTCCCGCAACGAGGGCACTGCCACCTACGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS GCA 90 bp GGTTGCGCAGGGTCCACAGGCAGTTCTGCACCAGGCGGGGGCTGTTaGTGGTCAGGTGCTTGCCCAGGGCCTGCATCCCACCAGCCTCCA +
Preference number: 5 (lower is better)
Translates to: GCAGSTGSSAPGGGC*WSGACPGPASHQPP
Trigger: TGGAGGCTGGTGGGATGCAGGCCCTGGGCAAGCACCTGACCAGCAACAGCCCCCGCCTGGTGCAGAACTGCCTGTGGACCCTGCGCAACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS CCA 90 bp GGCGAGCCCATCAGGGCCCGCCGCGACGCCTCCTTCTTCGACAGCTaGTTCACAATCATGGCCGCCTTGGTCACCACCACCGGGTCCTCG +
Preference number: 5 (lower is better)
Translates to: GEPIRARRDASFFDS*FTIMAALVTTTGSS
Trigger: CGAGGACCCGGTGGTGGTGACCAAGGCGGCCATGATTGTGAACCAGCTGTCGAAGAAGGAGGCGTCGCGGCGGGCCCTGATGGGCTCGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
ENST00000420370.5
ENST00000424457.5
ENST00000437187.5
ENST00000449889.5
CDS-3UTR CAA 90 bp CCATCGCCTGCACGGAGAGCCTCTCAGATGAGGAACCGCACTGGGGCCAGGCCGGGGATGCCACCCGACTaGAAGATGGCGAGCAGCCCC +
Preference number: 5 (lower is better)
Translates to: PSPARRASQMRNRTGARPGMPPD*KMASSP
Trigger: GGGGCTGCTCGCCATCTTCAAGTCGGGTGGCATCCC...CGGCCTGGCCCCAGTGCGGTTCCTCATCTGAGAGGCTCTCCGTGCAGGCGATGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310706.9
ENST00000393930.5
CDS GCA 90 bp GCCTTCACCAGCAGTTGGACGAGGCGGGGGATGACCGCTGCCTCCTaGAGCGGGGCATGGTTGGCTGGGCACAGGGCCAGATTCCTGATC +
Preference number: 5 (lower is better)
Translates to: AFTSSWTRRGMTAAS*SGAWLAGHRARFLI
Trigger: GATCAGGAATCTGGCCCTGTGCCCAGCCAACCATGCCCCGCTGCAGGAGGCAGCGGTCATCCCCCGCCTCGTCCAACTGCTGGTGAAGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
ENST00000585793.1
CDS GCA 90 bp GCCGGCGCGGACAGCGAACTGAGCTCGGCGTGGTCGGGCGGCGGCTaGTCCGGACTCTGGCCAAGGCAGCAACTCAGTAACCGAACAAAA +
Preference number: 5 (lower is better)
Translates to: AGADSELSSAWSGGG*SGLWPRQQLSNRTK
Trigger: TTTTGTTCGGTTACTGAGTTGCTGCCTTGGCCAGAGTCCGGAGCAGCCGCCGCCCGACCACGCCGAGCTCAGTTCGCTGTCCGCGCCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591690.5
CDS CCA 90 bp GGGATGCCACCCGACTTGAAGATGGCGAGCAGCCCCTCCCGGTGGTaGGAGAGGTTGTGCAGGATGCTGGTGGTGCAGCGGGCTGTGTCC +
Preference number: 5 (lower is better)
Translates to: GMPPDLKMASSPSRW*ERLCRMLVVQRAVS
Trigger: GGACACAGCCCGCTGCACCACCAGCATCCTGCACAACCTCTCCCACCACCGGGAGGGGCTGCTCGCCATCTTCAAGTCGGGTGGCATCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
ENST00000420370.5
ENST00000424457.5
ENST00000437187.5
ENST00000449889.5
CDS CCA 90 bp GCAGGGATGCCACCCGACTTGAAGATGGCGAGCAGCCCCTCCCGGTaGTGGGAGAGGTTGTGCAGGATGCTGGTGGTGCAGCGGGCTGTG +
Preference number: 5 (lower is better)
Translates to: AGMPPDLKMASSPSR*WERLCRMLVVQRAV
Trigger: CACAGCCCGCTGCACCACCAGCATCCTGCACAACCTCTCCCACCACCGGGAGGGGCTGCTCGCCATCTTCAAGTCGGGTGGCATCCCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
ENST00000420370.5
ENST00000424457.5
ENST00000437187.5
ENST00000449889.5
CDS CCA 90 bp TGCGCAGGGTCCACAGGCAGTTCTGCACCAGGCGGGGGCTGTTGCTaGTCAGGTGCTTGCCCAGGGCCTGCATCCCACCAGCCTCCACAA +
Preference number: 5 (lower is better)
Translates to: CAGSTGSSAPGGGCC*SGACPGPASHQPPQ
Trigger: TTGTGGAGGCTGGTGGGATGCAGGCCCTGGGCAAGCACCTGACCAGCAACAGCCCCCGCCTGGTGCAGAACTGCCTGTGGACCCTGCGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS CCA 90 bp GTAGGTGGCAGTGCCCTCGTTGCGGGAGTGCAGCAACTCCATGAGTaGGGCCGAGGCCCCCTCTGCATCAATGGCGTCGGCCGCCTCCTT +
Preference number: 5 (lower is better)
Translates to: VGGSALVAGVQQLHE*GRGPLCINGVGRLL
Trigger: AAGGAGGCGGCCGACGCCATTGATGCAGAGGGGGCCTCGGCCCCACTCATGGAGTTGCTGCACTCCCGCAACGAGGGCACTGCCACCTAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CAA 90 bp CCATCGCCTGCACGGAGAGCCTCTCAGATGAGGAACCGCACTGGGGCCAGGCCGTCCTCCATGATGCCCTaGCTGCTGACGGAGGGCACG +
Preference number: 5 (lower is better)
Translates to: PSPARRASQMRNRTGARPSSMMP*LLTEGT
Trigger: CGTGCCCTCCGTCAGCAGCAAGGGCATCATGGAGGA...CGGCCTGGCCCCAGTGCGGTTCCTCATCTGAGAGGCTCTCCGTGCAGGCGATGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310706.9
ENST00000393930.5
CDS GCA 90 bp TTGGTGGCCACATCTGAGAGGTTGCGCAGGGTCCACAGGCAGTTCTaGACCAGGCGGGGGCTGTTGCTGGTCAGGTGCTTGCCCAGGGCC +
Preference number: 5 (lower is better)
Translates to: LVATSERLRRVHRQF*TRRGLLLVRCLPRA
Trigger: GGCCCTGGGCAAGCACCTGACCAGCAACAGCCCCCGCCTGGTGCAGAACTGCCTGTGGACCCTGCGCAACCTCTCAGATGTGGCCACCAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS GCA 90 bp GCACACTCTCCAGGCCCTCCTGCTTGGTGGCCACATCTGAGAGGTTaGGCAGGGTCCACAGGCAGTTCTGCACCAGGCGGGGGCTGTTGC +
Preference number: 5 (lower is better)
Translates to: AHSPGPPAWWPHLRG*AGSTGSSAPGGGCC
Trigger: GCAACAGCCCCCGCCTGGTGCAGAACTGCCTGTGGACCCTGCGCAACCTCTCAGATGTGGCCACCAAGCAGGAGGGCCTGGAGAGTGTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS CCA 90 bp GAGGCGGGGGATGACCGCTGCCTCCTGCAGCGGGGCATGGTTGGCTaGGCACAGGGCCAGATTCCTGATCAAGCCGATGGTTGCCTTGAC +
Preference number: 5 (lower is better)
Translates to: EAGDDRCLLQRGMVG*AQGQIPDQADGCLD
Trigger: GTCAAGGCAACCATCGGCTTGATCAGGAATCTGGCCCTGTGCCCAGCCAACCATGCCCCGCTGCAGGAGGCAGCGGTCATCCCCCGCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
ENST00000585793.1
CDS-3UTR CAA 90 bp GAATGGGTACTTGAGTCTGAAGCTTTAGTGGCCAGGGCCACAGGGGCGGGGAGGGCCAGTCGCTGCAGGTaGGTGGCCTGCCCCTCCACC +
Preference number: 5 (lower is better)
Translates to: EWVLESEALVARATGAGRASRCR*VACPST
Trigger: GGTGGAGGGGCAGGCCACCAACCTGCAGCGACTGGC...CCTCCCCGCCCCTGTGGCCCTGGCCACTAAAGCTTCAGACTCAAGTACCCATTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS GCA 90 bp AGATGGCGAGCAGCCCCTCCCGGTGGTGGGAGAGGTTGTGCAGGATaGTGGTGGTGCAGCGGGCTGTGTCCAGGTCGCTGGTATTCTGCA +
Preference number: 5 (lower is better)
Translates to: RWRAAPPGGGRGCAG*WWCSGLCPGRWYSA
Trigger: TGCAGAATACCAGCGACCTGGACACAGCCCGCTGCACCACCAGCATCCTGCACAACCTCTCCCACCACCGGGAGGGGCTGCTCGCCATCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
ENST00000420370.5
ENST00000424457.5
ENST00000437187.5
ENST00000449889.5
CDS GCA 90 bp CCACGGACACGCGCTTCCGGTAGTCTGGGTTCTTGTCCTCGGAGATaGGGAACAGGACGGCAGCAGCGTAGGTGGCAGTGCCCTCGTTGC +
Preference number: 5 (lower is better)
Translates to: PRTRASGSLGSCPRR*GTGRQQRRWQCPRC
Trigger: GCAACGAGGGCACTGCCACCTACGCTGCTGCCGTCCTGTTCCGCATCTCCGAGGACAAGAACCCAGACTACCGGAAGCGCGTGTCCGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS CCA 90 bp CGCCTGACACACCAGGGCACATGGCCTCCCGCACCCGTTTGGCCCTaGCTGTTGTGGACATCTGGTACTCCAGATCACCTTGGCTGGGGG +
Preference number: 5 (lower is better)
Translates to: RLTHQGTWPPAPVWP*LLWTSGTPDHLGWG
Trigger: CCCCCAGCCAAGGTGATCTGGAGTACCAGATGTCCACAACAGCCAGGGCCAAACGGGTGCGGGAGGCCATGTGCCCTGGTGTGTCAGGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
ENST00000420370.5
ENST00000424457.5
ENST00000437187.5
ENST00000449889.5
ENST00000591690.5
CDS CCA 90 bp TGGCCAGCAGAAGCGAGCTGTCCTCGCCTGACACACCAGGGCACATaGCCTCCCGCACCCGTTTGGCCCTGGCTGTTGTGGACATCTGGT +
Preference number: 5 (lower is better)
Translates to: WPAEASCPRLTHQGT*PPAPVWPWLLWTSG
Trigger: ACCAGATGTCCACAACAGCCAGGGCCAAACGGGTGCGGGAGGCCATGTGCCCTGGTGTGTCAGGCGAGGACAGCTCGCTTCTGCTGGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
ENST00000420370.5
ENST00000424457.5
ENST00000437187.5
ENST00000449889.5
ENST00000591690.5
CDS-3UTR CAA 90 bp GAATGGGTACTTGAGTCTGAAGCTTTAGTGGCCAGGGCCACAGGGGCGGGGAGGGCCTCCCGCACCCGTTaGGCCCTGGCTGTTGTGGAC +
Preference number: 5 (lower is better)
Translates to: EWVLESEALVARATGAGRASRTR*ALAVVD
Trigger: GTCCACAACAGCCAGGGCCAAACGGGTGCGGGAGGC...CCTCCCCGCCCCTGTGGCCCTGGCCACTAAAGCTTCAGACTCAAGTACCCATTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CAA 90 bp TCTGGAGGCGCAGGGTGCAGCAGGAAGTTACACCCCGGCTTCCCCAGCTCAGGCACCGGGTCCTCGTCGTaGAGCAGTTTGGTGAGCTCG +
Preference number: 5 (lower is better)
Translates to: SGGAGCSRKLHPGFPSSGTGSSS*SSLVSS
Trigger: CGAGCTCACCAAACTGCTCAACGACGAGGACCCGGT...GCCTGAGCTGGGGAAGCCGGGGTGTAACTTCCTGCTGCACCCTGCGCCTCCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CAA 90 bp CATCCCCACCAAAGACACAAGAAGAAGGCAGGCCAGGGCACACCGTGCTTGGGGAGGCGCACGGCCATCTaGGCGCCCTCCTGGTACAGG +
Preference number: 5 (lower is better)
Translates to: HPHQRHKKKAGQGTPCLGRRTAI*APSWYR
Trigger: CCTGTACCAGGAGGGCGCCAAGATGGCCGTGCGCCT...CCCCAAGCACGGTGTGCCCTGGCCTGCCTTCTTCTTGTGTCTTTGGTGGGGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393931.8
CDS-3UTR CAA 90 bp CCATCGCCTGCACGGAGAGCCTCTCAGATGAGGAACCGCACTGGGGCCAGGCCGAAGCCGATGGTTGCCTaGACCAGTGGCCACTGGTTG +
Preference number: 5 (lower is better)
Translates to: PSPARRASQMRNRTGARPKPMVA*TSGHWL
Trigger: CAACCAGTGGCCACTGGTCAAGGCAACCATCGGCTT...CGGCCTGGCCCCAGTGCGGTTCCTCATCTGAGAGGCTCTCCGTGCAGGCGATGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310706.9
ENST00000393930.5
CDS-3UTR CAA 90 bp GAACACTATCCCAAGAAAGACCCTACGGAGGACCTCTGGAGGCGCAGGGTGCAGGCGTCGGCCGCCTCCTaGTCCTGGGCCAGCTCACAC +
Preference number: 5 (lower is better)
Translates to: EHYPKKDPTEDLWRRRVQASAAS*SWASSH
Trigger: GTGTGAGCTGGCCCAGGACAAGGAGGCGGCCGACGC...CTGCACCCTGCGCCTCCAGAGGTCCTCCGTAGGGTCTTTCTTGGGATAGTGTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS GCA 90 bp CCATGCGGTTCATGGGGTCCCGGGCGAGGATGTGCAGTGCTCCGGTaGAGCCCTCCACAATCTCCTCCATCCTCACACCATCCGTGTAGG +
Preference number: 5 (lower is better)
Translates to: PCGSWGPGRGCAVLR*SPPQSPPSSHHPCR
Trigger: CCTACACGGATGGTGTGAGGATGGAGGAGATTGTGGAGGGCTGCACCGGAGCACTGCACATCCTCGCCCGGGACCCCATGAACCGCATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
ENST00000585793.1
CDS CCA 90 bp AGCGAACTGAGCTCGGCGTGGTCGGGCGGCGGCTGCTCCGGACTCTaGCCAAGGCAGCAACTCAGTAACCGAACAAAAGGCGAAGAGACC +
Preference number: 5 (lower is better)
Translates to: SELSSAWSGGGCSGL*PRQQLSNRTKGEET
Trigger: GGTCTCTTCGCCTTTTGTTCGGTTACTGAGTTGCTGCCTTGGCCAGAGTCCGGAGCAGCCGCCGCCCGACCACGCCGAGCTCAGTTCGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591690.5
CDS-3UTR CAA 90 bp AGTGAGAAAATCAGACCCAGAGAAGGAACCAAAGCCCTTCCGGGCCCAGGCAGCGCCAGTCGCTGCAGGTaGGTGGCCTGCCCCTCCACC +
Preference number: 5 (lower is better)
Translates to: SEKIRPREGTKALPGPGSASRCR*VACPST
Trigger: GGTGGAGGGGCAGGCCACCAACCTGCAGCGACTGGC...GCTGCCTGGGCCCGGAAGGGCTTTGGTTCCTTCTCTGGGTCTGATTTTCTCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CAA 90 bp TTCTGTCTTGCCCCATCGCCTGCACGGAGAGCCTCTCAGATGAGGAACCGCACTAGGCGCACGGCCATCTaGGCGCCCTCCTGGTACAGG +
Preference number: 5 (lower is better)
Translates to: FCLAPSPARRASQMRNRTRRTAI*APSWYR
Trigger: CCTGTACCAGGAGGGCGCCAAGATGGCCGTGCGCCT...AGTGCGGTTCCTCATCTGAGAGGCTCTCCGTGCAGGCGATGGGGCAAGACAGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310706.9
ENST00000393930.5
CDS-3UTR CAA 90 bp CATCCCCACCAAAGACACAAGAAGAAGGCAGGCCAGGGCACACCGTGCTTGGGGGGCCTTCACCAGCAGTaGGACGAGGCGGGGGATGAC +
Preference number: 5 (lower is better)
Translates to: HPHQRHKKKAGQGTPCLGGLHQQ*DEAGDD
Trigger: GTCATCCCCCGCCTCGTCCAACTGCTGGTGAAGGCC...CCCCAAGCACGGTGTGCCCTGGCCTGCCTTCTTCTTGTGTCTTTGGTGGGGATG
63% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000393931.8
CDS-3UTR CAA 90 bp GAATGGGTACTTGAGTCTGAAGCTTTAGTGGCCAGGGCCACAGGGGCGGGGAGGGTGGCAGTGCCCTCGTaGCGGGAGTGCAGCAACTCC +
Preference number: 5 (lower is better)
Translates to: EWVLESEALVARATGAGRVAVPS*RECSNS
Trigger: GGAGTTGCTGCACTCCCGCAACGAGGGCACTGCCAC...CCTCCCCGCCCCTGTGGCCCTGGCCACTAAAGCTTCAGACTCAAGTACCCATTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CAA 90 bp TCTGGAGGCGCAGGGTGCAGCAGGAAGTTACACCCCGGCTTCCCCAGCTCAGGCTTGGATTTTGGGGGTTaGGGTCTCGAACCTGGGCCC +
Preference number: 5 (lower is better)
Translates to: SGGAGCSRKLHPGFPSSGLDFGG*GLEPGP
Trigger: GGGCCCAGGTTCGAGACCCAAACCCCCAAAATCCAA...GCCTGAGCTGGGGAAGCCGGGGTGTAACTTCCTGCTGCACCCTGCGCCTCCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS GCA 90 bp AGCCGGAAGATCTCCATGCGGTTCATGGGGTCCCGGGCGAGGATGTaGAGTGCTCCGGTGCAGCCCTCCACAATCTCCTCCATCCTCACA +
Preference number: 5 (lower is better)
Translates to: SRKISMRFMGSRARM*SAPVQPSTISSILT
Trigger: TGTGAGGATGGAGGAGATTGTGGAGGGCTGCACCGGAGCACTGCACATCCTCGCCCGGGACCCCATGAACCGCATGGAGATCTTCCGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
ENST00000585793.1
CDS GCA 90 bp TTGATGGGAATCATGCTCTGGGCAGCCTCCCAGGCAGCCGGGTCATaGTTGAAGAGGGAGTTGGTGAGCTCCACGGACACGCGCTTCCGG +
Preference number: 5 (lower is better)
Translates to: LMGIMLWAASQAAGS*LKRELVSSTDTRFR
Trigger: CCGGAAGCGCGTGTCCGTGGAGCTCACCAACTCCCTCTTCAAGCATGACCCGGCTGCCTGGGAGGCTGCCCAGAGCATGATTCCCATCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS CCA 90 bp TGTCCTCGCCTGACACACCAGGGCACATGGCCTCCCGCACCCGTTTaGCCCTGGCTGTTGTGGACATCTGGTACTCCAGATCACCTTGGC +
Preference number: 5 (lower is better)
Translates to: CPRLTHQGTWPPAPV*PWLLWTSGTPDHLG
Trigger: GCCAAGGTGATCTGGAGTACCAGATGTCCACAACAGCCAGGGCCAAACGGGTGCGGGAGGCCATGTGCCCTGGTGTGTCAGGCGAGGACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
ENST00000420370.5
ENST00000424457.5
ENST00000437187.5
ENST00000449889.5
ENST00000591690.5
CDS-3UTR CAA 90 bp TGGAGGCCCTGGGGGCTTAGGGCAGTTGGTCGGTGGAGTTCAGTGAGAAAATCAGAGGGCACGCAGGTGTaGGCGCCCGAGTGGATACCC +
Preference number: 5 (lower is better)
Translates to: WRPWGLRAVGRWSSVRKSEGTQV*APEWIP
Trigger: GGGTATCCACTCGGGCGCCAACACCTGCGTGCCCTC...TGATTTTCTCACTGAACTCCACCGACCAACTGCCCTAAGCCCCCAGGGCCTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CAA 90 bp GAATGGGTACTTGAGTCTGAAGCTTTAGTGGCCAGGGCCACAGGGGCGGGGAGGACAATCATGGCCGCCTaGGTCACCACCACCGGGTCC +
Preference number: 5 (lower is better)
Translates to: EWVLESEALVARATGAGRTIMAA*VTTTGS
Trigger: GGACCCGGTGGTGGTGACCAAGGCGGCCATGATTGT...CCTCCCCGCCCCTGTGGCCCTGGCCACTAAAGCTTCAGACTCAAGTACCCATTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CAA 90 bp TTCTGTCTTGCCCCATCGCCTGCACGGAGAGCCTCTCAGATGAGGAACCGCACTGGGATGCCACCCGACTaGAAGATGGCGAGCAGCCCC +
Preference number: 5 (lower is better)
Translates to: FCLAPSPARRASQMRNRTGMPPD*KMASSP
Trigger: GGGGCTGCTCGCCATCTTCAAGTCGGGTGGCATCCC...AGTGCGGTTCCTCATCTGAGAGGCTCTCCGTGCAGGCGATGGGGCAAGACAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310706.9
ENST00000393930.5
CDS-3UTR CAA 90 bp TGGAGGCCCTGGGGGCTTAGGGCAGTTGGTCGGTGGAGTTCAGTGAGAAAATCAAGGCGCACGGCCATCTaGGCGCCCTCCTGGTACAGG +
Preference number: 5 (lower is better)
Translates to: WRPWGLRAVGRWSSVRKSRRTAI*APSWYR
Trigger: CCTGTACCAGGAGGGCGCCAAGATGGCCGTGCGCCT...TGATTTTCTCACTGAACTCCACCGACCAACTGCCCTAAGCCCCCAGGGCCTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CAA 90 bp GGCACTTTTCTGTCTTGCCCCATCGCCTGCACGGAGAGCCTCTCAGATGAGGAACAGGGGCACCATCTTTaGCAGCCCGTCGGCCAGGCG +
Preference number: 5 (lower is better)
Translates to: GTFLSCPIACTESLSDEEQGHHL*QPVGQA
Trigger: CGCCTGGCCGACGGGCTGCAAAAGATGGTGCCCCTG...TTCCTCATCTGAGAGGCTCTCCGTGCAGGCGATGGGGCAAGACAGAAAAGTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CAA 90 bp CCATCGCCTGCACGGAGAGCCTCTCAGATGAGGAACCGCACTGGGGCCAGGCCGGTGATGGCCAGGAACTaGGGGTTGTTCTTGTTGAGC +
Preference number: 5 (lower is better)
Translates to: PSPARRASQMRNRTGARPVMARN*GLFLLS
Trigger: GCTCAACAAGAACAACCCCAAGTTCCTGGCCATCAC...CGGCCTGGCCCCAGTGCGGTTCCTCATCTGAGAGGCTCTCCGTGCAGGCGATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310706.9
ENST00000393930.5
CDS-3UTR CAA 90 bp CTTCTGGAGCAGGTGACTCACTCCATATCTCCTCCCCATCTCCCCTGGACGGTCGGCCTTCACCAGCAGTaGGACGAGGCGGGGGATGAC +
Preference number: 5 (lower is better)
Translates to: LLEQVTHSISPPHLPWTVGLHQQ*DEAGDD
Trigger: GTCATCCCCCGCCTCGTCCAACTGCTGGTGAAGGCC...GACCGTCCAGGGGAGATGGGGAGGAGATATGGAGTGAGTCACCTGCTCCAGAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CAA 90 bp GCGGGGAGATGGGAGGGCCTCCAACAGAAGGAGGTTCTAGAGAGGAGGAAAAGCGTGGCAGTGCCCTCGTaGCGGGAGTGCAGCAACTCC +
Preference number: 5 (lower is better)
Translates to: AGRWEGLQQKEVLERRKSVAVPS*RECSNS
Trigger: GGAGTTGCTGCACTCCCGCAACGAGGGCACTGCCAC...GCTTTTCCTCCTCTCTAGAACCTCCTTCTGTTGGAGGCCCTCCCATCTCCCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393931.8
CDS GCA 90 bp GAAGATCTCCATGCGGTTCATGGGGTCCCGGGCGAGGATGTGCAGTaGTCCGGTGCAGCCCTCCACAATCTCCTCCATCCTCACACCATC +
Preference number: 5 (lower is better)
Translates to: EDLHAVHGVPGEDVQ*SGAALHNLLHPHTI
Trigger: GATGGTGTGAGGATGGAGGAGATTGTGGAGGGCTGCACCGGAGCACTGCACATCCTCGCCCGGGACCCCATGAACCGCATGGAGATCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
ENST00000585793.1
CDS CCA 90 bp GAAGAGGGAGTTGGTGAGCTCCACGGACACGCGCTTCCGGTAGTCTaGGTTCTTGTCCTCGGAGATGCGGAACAGGACGGCAGCAGCGTA +
Preference number: 5 (lower is better)
Translates to: EEGVGELHGHALPVV*VLVLGDAEQDGSSV
Trigger: TACGCTGCTGCCGTCCTGTTCCGCATCTCCGAGGACAAGAACCCAGACTACCGGAAGCGCGTGTCCGTGGAGCTCACCAACTCCCTCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CAA 90 bp GAAAATCAGACCCAGAGAAGGAACCAAAGCCCTTCCGGGCCCAGGCAGCTGGAGTCCTCCATGATGCCCTaGCTGCTGACGGAGGGCACG +
Preference number: 5 (lower is better)
Translates to: ENQTQRRNQSPSGPRQLESSMMP*LLTEGT
Trigger: CGTGCCCTCCGTCAGCAGCAAGGGCATCATGGAGGA...CTCCAGCTGCCTGGGCCCGGAAGGGCTTTGGTTCCTTCTCTGGGTCTGATTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CAA 90 bp AAAACAGAATGGGTACTTGAGTCTGAAGCTTTAGTGGCCAGGGCCACAGGGGCGGCCAGTCGCTGCAGGTaGGTGGCCTGCCCCTCCACC +
Preference number: 5 (lower is better)
Translates to: KTEWVLESEALVARATGAASRCR*VACPST
Trigger: GGTGGAGGGGCAGGCCACCAACCTGCAGCGACTGGC...CGCCCCTGTGGCCCTGGCCACTAAAGCTTCAGACTCAAGTACCCATTCTGTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CAA 90 bp GAACACTATCCCAAGAAAGACCCTACGGAGGACCTCTGGAGGCGCAGGGTGCAGTGCACAATGGCCGACTaGAGCAGCTGGGACGGCTCG +
Preference number: 5 (lower is better)
Translates to: EHYPKKDPTEDLWRRRVQCTMAD*SSWDGS
Trigger: CGAGCCGTCCCAGCTGCTCAAGTCGGCCATTGTGCA...CTGCACCCTGCGCCTCCAGAGGTCCTCCGTAGGGTCTTTCTTGGGATAGTGTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CAA 90 bp GAAAATCAGACCCAGAGAAGGAACCAAAGCCCTTCCGGGCCCAGGCAGCTGGAGTCGTCGTTGAGCAGTTaGGTGAGCTCGGGCAGGGCG +
Preference number: 5 (lower is better)
Translates to: ENQTQRRNQSPSGPRQLESSLSS*VSSGRA
Trigger: CGCCCTGCCCGAGCTCACCAAACTGCTCAACGACGA...CTCCAGCTGCCTGGGCCCGGAAGGGCTTTGGTTCCTTCTCTGGGTCTGATTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CAA 90 bp GCGGGGAGATGGGAGGGCCTCCAACAGAAGGAGGTTCTAGAGAGGAGGAAAAGCTCGTCGTTGAGCAGTTaGGTGAGCTCGGGCAGGGCG +
Preference number: 5 (lower is better)
Translates to: AGRWEGLQQKEVLERRKSSSLSS*VSSGRA
Trigger: CGCCCTGCCCGAGCTCACCAAACTGCTCAACGACGA...GCTTTTCCTCCTCTCTAGAACCTCCTTCTGTTGGAGGCCCTCCCATCTCCCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393931.8
CDS-3UTR CAA 90 bp AAGAGAAAGCCCCTCACCACACACCAGAGGGGTCAGCCAAGAGCACTTCTCGGGACAATCATGGCCGCCTaGGTCACCACCACCGGGTCC +
Preference number: 5 (lower is better)
Translates to: KRKPLTTHQRGQPRALLGTIMAA*VTTTGS
Trigger: GGACCCGGTGGTGGTGACCAAGGCGGCCATGATTGT...CCCGAGAAGTGCTCTTGGCTGACCCCTCTGGTGTGTGGTGAGGGGCTTTCTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CAA 90 bp GAAAATCAGACCCAGAGAAGGAACCAAAGCCCTTCCGGGCCCAGGCAGCTGGAGCGGTGGTGGGAGAGGTaGTGCAGGATGCTGGTGGTG +
Preference number: 5 (lower is better)
Translates to: ENQTQRRNQSPSGPRQLERWWER*CRMLVV
Trigger: CACCACCAGCATCCTGCACAACCTCTCCCACCACCG...CTCCAGCTGCCTGGGCCCGGAAGGGCTTTGGTTCCTTCTCTGGGTCTGATTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CAA 90 bp TTCTGTCTTGCCCCATCGCCTGCACGGAGAGCCTCTCAGATGAGGAACCGCACTCGGTGGTGGGAGAGGTaGTGCAGGATGCTGGTGGTG +
Preference number: 5 (lower is better)
Translates to: FCLAPSPARRASQMRNRTRWWER*CRMLVV
Trigger: CACCACCAGCATCCTGCACAACCTCTCCCACCACCG...AGTGCGGTTCCTCATCTGAGAGGCTCTCCGTGCAGGCGATGGGGCAAGACAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310706.9
ENST00000393930.5
CDS-3UTR CAA 90 bp TGGAGGCCCTGGGGGCTTAGGGCAGTTGGTCGGTGGAGTTCAGTGAGAAAATCAGGGATGCCACCCGACTaGAAGATGGCGAGCAGCCCC +
Preference number: 5 (lower is better)
Translates to: WRPWGLRAVGRWSSVRKSGMPPD*KMASSP
Trigger: GGGGCTGCTCGCCATCTTCAAGTCGGGTGGCATCCC...TGATTTTCTCACTGAACTCCACCGACCAACTGCCCTAAGCCCCCAGGGCCTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CAA 90 bp AAAACAGAATGGGTACTTGAGTCTGAAGCTTTAGTGGCCAGGGCCACAGGGGCGGCGTCGGCCGCCTCCTaGTCCTGGGCCAGCTCACAC +
Preference number: 5 (lower is better)
Translates to: KTEWVLESEALVARATGAASAAS*SWASSH
Trigger: GTGTGAGCTGGCCCAGGACAAGGAGGCGGCCGACGC...CGCCCCTGTGGCCCTGGCCACTAAAGCTTCAGACTCAAGTACCCATTCTGTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CAA 90 bp GGGAAAACAGAATGGGTACTTGAGTCTGAAGCTTTAGTGGCCAGGGCCACAGGGGCGTCGGCCGCCTCCTaGTCCTGGGCCAGCTCACAC +
Preference number: 5 (lower is better)
Translates to: GKTEWVLESEALVARATGASAAS*SWASSH
Trigger: GTGTGAGCTGGCCCAGGACAAGGAGGCGGCCGACGC...CCCTGTGGCCCTGGCCACTAAAGCTTCAGACTCAAGTACCCATTCTGTTTTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CAA 90 bp TGGAGGCCCTGGGGGCTTAGGGCAGTTGGTCGGTGGAGTTCAGTGAGAAAATCAGTGGCAGTGCCCTCGTaGCGGGAGTGCAGCAACTCC +
Preference number: 5 (lower is better)
Translates to: WRPWGLRAVGRWSSVRKSVAVPS*RECSNS
Trigger: GGAGTTGCTGCACTCCCGCAACGAGGGCACTGCCAC...TGATTTTCTCACTGAACTCCACCGACCAACTGCCCTAAGCCCCCAGGGCCTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CAA 90 bp GAATGGGTACTTGAGTCTGAAGCTTTAGTGGCCAGGGCCACAGGGGCGGGGAGGGCAGCCGGGTCATGCTaGAAGAGGGAGTTGGTGAGC +
Preference number: 5 (lower is better)
Translates to: EWVLESEALVARATGAGRAAGSC*KRELVS
Trigger: GCTCACCAACTCCCTCTTCAAGCATGACCCGGCTGC...CCTCCCCGCCCCTGTGGCCCTGGCCACTAAAGCTTCAGACTCAAGTACCCATTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CAA 90 bp GAATGGGTACTTGAGTCTGAAGCTTTAGTGGCCAGGGCCACAGGGGCGGGGAGGCAGGGCACACCGTGCTaGGGGAAGCTCAGCAGCAAA +
Preference number: 5 (lower is better)
Translates to: EWVLESEALVARATGAGRQGTPC*GKLSSK
Trigger: TTTGCTGCTGAGCTTCCCCAAGCACGGTGTGCCCTG...CCTCCCCGCCCCTGTGGCCCTGGCCACTAAAGCTTCAGACTCAAGTACCCATTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393931.8
CDS CCA 90 bp GCAGGCTCCGTGATGTCGTCCTTGTCACCAGCACGCAGGATGGCATaGATGAGAGCCTCCACACCGCTGTTCTGTGTCACCAGCGTCTTG +
Preference number: 5 (lower is better)
Translates to: AGSVMSSLSPARRMA*MRASTPLFCVTSVL
Trigger: CAAGACGCTGGTGACACAGAACAGCGGTGTGGAGGCTCTCATCCATGCCATCCTGCGTGCTGGTGACAAGGACGACATCACGGAGCCTGC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS CCA 90 bp GACCAGTGGCCACTGGTTGGGCTGGTTGAGCAGCTTCACGATGGCTaGGATGCCATAGTTGAGACGCACAGAGTTCTGGGCCATCTCGGC +
Preference number: 5 (lower is better)
Translates to: DQWPLVGLVEQLHDG*DAIVETHRVLGHLG
Trigger: GCCGAGATGGCCCAGAACTCTGTGCGTCTCAACTATGGCATCCCAGCCATCGTGAAGCTGCTCAACCAGCCCAACCAGTGGCCACTGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
ENST00000585793.1
CDS-3UTR CAA 90 bp AGTTCAGTGAGAAAATCAGACCCAGAGAAGGAACCAAAGCCCTTCCGGGCCCAGGAGGGCACGCAGGTGTaGGCGCCCGAGTGGATACCC +
Preference number: 5 (lower is better)
Translates to: SSVRKSDPEKEPKPFRAQEGTQV*APEWIP
Trigger: GGGTATCCACTCGGGCGCCAACACCTGCGTGCCCTC...CTGGGCCCGGAAGGGCTTTGGTTCCTTCTCTGGGTCTGATTTTCTCACTGAACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CAA 90 bp AGTGAGAAAATCAGACCCAGAGAAGGAACCAAAGCCCTTCCGGGCCCAGGCAGCTCCTCCATGATGCCCTaGCTGCTGACGGAGGGCACG +
Preference number: 5 (lower is better)
Translates to: SEKIRPREGTKALPGPGSSSMMP*LLTEGT
Trigger: CGTGCCCTCCGTCAGCAGCAAGGGCATCATGGAGGA...GCTGCCTGGGCCCGGAAGGGCTTTGGTTCCTTCTCTGGGTCTGATTTTCTCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CAA 90 bp GGGAAAACAGAATGGGTACTTGAGTCTGAAGCTTTAGTGGCCAGGGCCACAGGGGCCTCCCGCACCCGTTaGGCCCTGGCTGTTGTGGAC +
Preference number: 5 (lower is better)
Translates to: GKTEWVLESEALVARATGASRTR*ALAVVD
Trigger: GTCCACAACAGCCAGGGCCAAACGGGTGCGGGAGGC...CCCTGTGGCCCTGGCCACTAAAGCTTCAGACTCAAGTACCCATTCTGTTTTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CAA 90 bp AGTTCAGTGAGAAAATCAGACCCAGAGAAGGAACCAAAGCCCTTCCGGGCCCAGGCCTCCCGCACCCGTTaGGCCCTGGCTGTTGTGGAC +
Preference number: 5 (lower is better)
Translates to: SSVRKSDPEKEPKPFRAQASRTR*ALAVVD
Trigger: GTCCACAACAGCCAGGGCCAAACGGGTGCGGGAGGC...CTGGGCCCGGAAGGGCTTTGGTTCCTTCTCTGGGTCTGATTTTCTCACTGAACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CAA 90 bp TGGAGGCCCTGGGGGCTTAGGGCAGTTGGTCGGTGGAGTTCAGTGAGAAAATCATGCACAATGGCCGACTaGAGCAGCTGGGACGGCTCG +
Preference number: 5 (lower is better)
Translates to: WRPWGLRAVGRWSSVRKSCTMAD*SSWDGS
Trigger: CGAGCCGTCCCAGCTGCTCAAGTCGGCCATTGTGCA...TGATTTTCTCACTGAACTCCACCGACCAACTGCCCTAAGCCCCCAGGGCCTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CAA 90 bp GGCACTTTTCTGTCTTGCCCCATCGCCTGCACGGAGAGCCTCTCAGATGAGGAATGCACAATGGCCGACTaGAGCAGCTGGGACGGCTCG +
Preference number: 5 (lower is better)
Translates to: GTFLSCPIACTESLSDEECTMAD*SSWDGS
Trigger: CGAGCCGTCCCAGCTGCTCAAGTCGGCCATTGTGCA...TTCCTCATCTGAGAGGCTCTCCGTGCAGGCGATGGGGCAAGACAGAAAAGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CAA 90 bp AGAACACTATCCCAAGAAAGACCCTACGGAGGACCTCTGGAGGCGCAGGGTGCACGGTGGTGGGAGAGGTaGTGCAGGATGCTGGTGGTG +
Preference number: 5 (lower is better)
Translates to: RTLSQERPYGGPLEAQGARWWER*CRMLVV
Trigger: CACCACCAGCATCCTGCACAACCTCTCCCACCACCG...TGCACCCTGCGCCTCCAGAGGTCCTCCGTAGGGTCTTTCTTGGGATAGTGTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CAA 90 bp GAATGGGTACTTGAGTCTGAAGCTTTAGTGGCCAGGGCCACAGGGGCGGGGAGGTGGTACAGGAGCAGGTaGTGCAGCGTGGTGATGGCA +
Preference number: 5 (lower is better)
Translates to: EWVLESEALVARATGAGRWYRSR*CSVVMA
Trigger: TGCCATCACCACGCTGCACAACCTGCTCCTGTACCA...CCTCCCCGCCCCTGTGGCCCTGGCCACTAAAGCTTCAGACTCAAGTACCCATTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CAA 90 bp GGGAAAACAGAATGGGTACTTGAGTCTGAAGCTTTAGTGGCCAGGGCCACAGGGCAGGGGCACCATCTTTaGCAGCCCGTCGGCCAGGCG +
Preference number: 5 (lower is better)
Translates to: GKTEWVLESEALVARATGQGHHL*QPVGQA
Trigger: CGCCTGGCCGACGGGCTGCAAAAGATGGTGCCCCTG...CCCTGTGGCCCTGGCCACTAAAGCTTCAGACTCAAGTACCCATTCTGTTTTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CAA 90 bp AAAACAGAATGGGTACTTGAGTCTGAAGCTTTAGTGGCCAGGGCCACAGGGGCGCAGGGGCACCATCTTTaGCAGCCCGTCGGCCAGGCG +
Preference number: 5 (lower is better)
Translates to: KTEWVLESEALVARATGAQGHHL*QPVGQA
Trigger: CGCCTGGCCGACGGGCTGCAAAAGATGGTGCCCCTG...CGCCCCTGTGGCCCTGGCCACTAAAGCTTCAGACTCAAGTACCCATTCTGTTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CAA 90 bp CCCTGGGGGCTTAGGGCAGTTGGTCGGTGGAGTTCAGTGAGAAAATCAGACCCAGCCTGGGGCCCACCATaGGCCAGGATGATCAGCTTG +
Preference number: 5 (lower is better)
Translates to: PWGLRAVGRWSSVRKSDPAWGPP*ARMISL
Trigger: CAAGCTGATCATCCTGGCCAATGGTGGGCCCCAGGC...TGGGTCTGATTTTCTCACTGAACTCCACCGACCAACTGCCCTAAGCCCCCAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CAA 90 bp TGGAGGCCCTGGGGGCTTAGGGCAGTTGGTCGGTGGAGTTCAGTGAGAAAATCAGCCACATCTGAGAGGTaGCGCAGGGTCCACAGGCAG +
Preference number: 5 (lower is better)
Translates to: WRPWGLRAVGRWSSVRKSATSER*RRVHRQ
Trigger: CTGCCTGTGGACCCTGCGCAACCTCTCAGATGTGGC...TGATTTTCTCACTGAACTCCACCGACCAACTGCCCTAAGCCCCCAGGGCCTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CAA 90 bp AGAACACTATCCCAAGAAAGACCCTACGGAGGACCTCTGGAGGCGCAGGGTGCATCCAGGCCCTCCTGCTaGGTGGCCACATCTGAGAGG +
Preference number: 5 (lower is better)
Translates to: RTLSQERPYGGPLEAQGASRPSC*VATSER
Trigger: CCTCTCAGATGTGGCCACCAAGCAGGAGGGCCTGGA...TGCACCCTGCGCCTCCAGAGGTCCTCCGTAGGGTCTTTCTTGGGATAGTGTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CAA 90 bp CCCTGGGGGCTTAGGGCAGTTGGTCGGTGGAGTTCAGTGAGAAAATCAGACCCATCCAGGCCCTCCTGCTaGGTGGCCACATCTGAGAGG +
Preference number: 5 (lower is better)
Translates to: PWGLRAVGRWSSVRKSDPSRPSC*VATSER
Trigger: CCTCTCAGATGTGGCCACCAAGCAGGAGGGCCTGGA...TGGGTCTGATTTTCTCACTGAACTCCACCGACCAACTGCCCTAAGCCCCCAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CAA 90 bp CTTCTGGAGCAGGTGACTCACTCCATATCTCCTCCCCATCTCCCCTGGACGGTCACCAGTGGCCACTGGTaGGGCTGGTTGAGCAGCTTC +
Preference number: 5 (lower is better)
Translates to: LLEQVTHSISPPHLPWTVTSGHW*GWLSSF
Trigger: GAAGCTGCTCAACCAGCCCAACCAGTGGCCACTGGT...GACCGTCCAGGGGAGATGGGGAGGAGATATGGAGTGAGTCACCTGCTCCAGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CAA 90 bp GAAAATCAGACCCAGAGAAGGAACCAAAGCCCTTCCGGGCCCAGGCAGCTGGAGACCAGTGGCCACTGGTaGGGCTGGTTGAGCAGCTTC +
Preference number: 5 (lower is better)
Translates to: ENQTQRRNQSPSGPRQLETSGHW*GWLSSF
Trigger: GAAGCTGCTCAACCAGCCCAACCAGTGGCCACTGGT...CTCCAGCTGCCTGGGCCCGGAAGGGCTTTGGTTCCTTCTCTGGGTCTGATTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CAA 90 bp GAATGGGTACTTGAGTCTGAAGCTTTAGTGGCCAGGGCCACAGGGGCGGGGAGGTGCTTGAAGAGGGAGTaGGTGAGCTCCACGGACACG +
Preference number: 5 (lower is better)
Translates to: EWVLESEALVARATGAGRCLKRE*VSSTDT
Trigger: CGTGTCCGTGGAGCTCACCAACTCCCTCTTCAAGCA...CCTCCCCGCCCCTGTGGCCCTGGCCACTAAAGCTTCAGACTCAAGTACCCATTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CAA 90 bp GTTTCAGCGGGGAGATGGGAGGGCCTCCAACAGAAGGAGGTTCTAGAGAGGAGGGCAGCCGGGTCATGCTaGAAGAGGGAGTTGGTGAGC +
Preference number: 5 (lower is better)
Translates to: VSAGRWEGLQQKEVLERRAAGSC*KRELVS
Trigger: GCTCACCAACTCCCTCTTCAAGCATGACCCGGCTGC...CCTCCTCTCTAGAACCTCCTTCTGTTGGAGGCCCTCCCATCTCCCCGCTGAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393931.8
CDS CCA 90 bp AGGGAGGTGAACTTCCCGCTTGGTCTGTGTTTGGCTCCACTGTCCTaGGAACTGACCTGCAGAGGTCAGAGGCTGAGTATGGGGCCTGAC +
Preference number: 5 (lower is better)
Translates to: REVNFPLGLCLAPLS*ELTCRGQRLSMGPD
Trigger: GTCAGGCCCCATACTCAGCCTCTGACCTCTGCAGGTCAGTTCCCAGGACAGTGGAGCCAAACACAGACCAAGCGGGAAGTTCACCTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424457.5
CDS-3UTR CAA 90 bp TGGAGGCCCTGGGGGCTTAGGGCAGTTGGTCGGTGGAGTTCAGTGAGAAAATCAACCGGGTCCTCGTCGTaGAGCAGTTTGGTGAGCTCG +
Preference number: 5 (lower is better)
Translates to: WRPWGLRAVGRWSSVRKSTGSSS*SSLVSS
Trigger: CGAGCTCACCAAACTGCTCAACGACGAGGACCCGGT...TGATTTTCTCACTGAACTCCACCGACCAACTGCCCTAAGCCCCCAGGGCCTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CAA 90 bp CCCTGGGGGCTTAGGGCAGTTGGTCGGTGGAGTTCAGTGAGAAAATCAGACCCAACCGGGTCCTCGTCGTaGAGCAGTTTGGTGAGCTCG +
Preference number: 5 (lower is better)
Translates to: PWGLRAVGRWSSVRKSDPTGSSS*SSLVSS
Trigger: CGAGCTCACCAAACTGCTCAACGACGAGGACCCGGT...TGGGTCTGATTTTCTCACTGAACTCCACCGACCAACTGCCCTAAGCCCCCAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CAA 90 bp GTTTCAGCGGGGAGATGGGAGGGCCTCCAACAGAAGGAGGTTCTAGAGAGGAGGCACACGGATAGCACCTaGAGCACACGACTGGTGGTC +
Preference number: 5 (lower is better)
Translates to: VSAGRWEGLQQKEVLERRHTDST*STRLVV
Trigger: GACCACCAGTCGTGTGCTCAAGGTGCTATCCGTGTG...CCTCCTCTCTAGAACCTCCTTCTGTTGGAGGCCCTCCCATCTCCCCGCTGAAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393931.8
CDS-3UTR CAA 90 bp AAGAGAAAGCCCCTCACCACACACCAGAGGGGTCAGCCAAGAGCACTTCTCGGGGCACAGGTGAGGACGTaGACGTCATCCACACTCAGC +
Preference number: 5 (lower is better)
Translates to: KRKPLTTHQRGQPRALLGAQVRT*TSSTLS
Trigger: GCTGAGTGTGGATGACGTCAACGTCCTCACCTGTGC...CCCGAGAAGTGCTCTTGGCTGACCCCTCTGGTGTGTGGTGAGGGGCTTTCTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CAA 90 bp GAAAATCAGACCCAGAGAAGGAACCAAAGCCCTTCCGGGCCCAGGCAGCTGGAGGCACAGGTGAGGACGTaGACGTCATCCACACTCAGC +
Preference number: 5 (lower is better)
Translates to: ENQTQRRNQSPSGPRQLEAQVRT*TSSTLS
Trigger: GCTGAGTGTGGATGACGTCAACGTCCTCACCTGTGC...CTCCAGCTGCCTGGGCCCGGAAGGGCTTTGGTTCCTTCTCTGGGTCTGATTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CAA 90 bp GAATGGGTACTTGAGTCTGAAGCTTTAGTGGCCAGGGCCACAGGGGCGGGGAGGTTGTTGCATGTCAGGTaGGAGAGTGTGCCCGTGGCA +
Preference number: 5 (lower is better)
Translates to: EWVLESEALVARATGAGRLLHVR*ESVPVA
Trigger: TGCCACGGGCACACTCTCCAACCTGACATGCAACAA...CCTCCCCGCCCCTGTGGCCCTGGCCACTAAAGCTTCAGACTCAAGTACCCATTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CAA 90 bp TTCTGTCTTGCCCCATCGCCTGCACGGAGAGCCTCTCAGATGAGGAACCGCACTTCCGTGATGTCGTCCTaGTCACCAGCACGCAGGATG +
Preference number: 5 (lower is better)
Translates to: FCLAPSPARRASQMRNRTSVMSS*SPARRM
Trigger: CATCCTGCGTGCTGGTGACAAGGACGACATCACGGA...AGTGCGGTTCCTCATCTGAGAGGCTCTCCGTGCAGGCGATGGGGCAAGACAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310706.9
ENST00000393930.5
CDS-3UTR CAA 90 bp GAACACTATCCCAAGAAAGACCCTACGGAGGACCTCTGGAGGCGCAGGGTGCAGTCCGTGATGTCGTCCTaGTCACCAGCACGCAGGATG +
Preference number: 5 (lower is better)
Translates to: EHYPKKDPTEDLWRRRVQSVMSS*SPARRM
Trigger: CATCCTGCGTGCTGGTGACAAGGACGACATCACGGA...CTGCACCCTGCGCCTCCAGAGGTCCTCCGTAGGGTCTTTCTTGGGATAGTGTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CAA 90 bp AAGAGAAAGCCCCTCACCACACACCAGAGGGGTCAGCCAAGAGCACTTCTCGGGTCCGTGATGTCGTCCTaGTCACCAGCACGCAGGATG +
Preference number: 5 (lower is better)
Translates to: KRKPLTTHQRGQPRALLGSVMSS*SPARRM
Trigger: CATCCTGCGTGCTGGTGACAAGGACGACATCACGGA...CCCGAGAAGTGCTCTTGGCTGACCCCTCTGGTGTGTGGTGAGGGGCTTTCTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CAA 90 bp AGTGAGAAAATCAGACCCAGAGAAGGAACCAAAGCCCTTCCGGGCCCAGGCAGCACCAGTGGCCACTGGTaGGGCTGGTTGAGCAGCTTC +
Preference number: 5 (lower is better)
Translates to: SEKIRPREGTKALPGPGSTSGHW*GWLSSF
Trigger: GAAGCTGCTCAACCAGCCCAACCAGTGGCCACTGGT...GCTGCCTGGGCCCGGAAGGGCTTTGGTTCCTTCTCTGGGTCTGATTTTCTCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CAA 90 bp GAACACTATCCCAAGAAAGACCCTACGGAGGACCTCTGGAGGCGCAGGGTGCAGAAGCCGATGGTTGCCTaGACCAGTGGCCACTGGTTG +
Preference number: 5 (lower is better)
Translates to: EHYPKKDPTEDLWRRRVQKPMVA*TSGHWL
Trigger: CAACCAGTGGCCACTGGTCAAGGCAACCATCGGCTT...CTGCACCCTGCGCCTCCAGAGGTCCTCCGTAGGGTCTTTCTTGGGATAGTGTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CAA 90 bp GGGAAAACAGAATGGGTACTTGAGTCTGAAGCTTTAGTGGCCAGGGCCACAGGGGGCCTTCACCAGCAGTaGGACGAGGCGGGGGATGAC +
Preference number: 5 (lower is better)
Translates to: GKTEWVLESEALVARATGGLHQQ*DEAGDD
Trigger: GTCATCCCCCGCCTCGTCCAACTGCTGGTGAAGGCC...CCCTGTGGCCCTGGCCACTAAAGCTTCAGACTCAAGTACCCATTCTGTTTTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CAA 90 bp CCCTGGGGGCTTAGGGCAGTTGGTCGGTGGAGTTCAGTGAGAAAATCAGACCCAGCAGCCGGGTCATGCTaGAAGAGGGAGTTGGTGAGC +
Preference number: 5 (lower is better)
Translates to: PWGLRAVGRWSSVRKSDPAAGSC*KRELVS
Trigger: GCTCACCAACTCCCTCTTCAAGCATGACCCGGCTGC...TGGGTCTGATTTTCTCACTGAACTCCACCGACCAACTGCCCTAAGCCCCCAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS CCA 90 bp CATCCATGTCCATGTGCATCTCCAGCGGGTCAAGGGGCACATCGCTaGAGTACATGGGGCGGTAGGTGGCATCCATGTCATCTCCATAGG +
Preference number: 5 (lower is better)
Translates to: HPCPCASPAGQGAHR*STWGGRWHPCHLHR
Trigger: CCTATGGAGATGACATGGATGCCACCTACCGCCCCATGTACTCCAGCGATGTGCCCCTTGACCCGCTGGAGATGCACATGGACATGGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CAA 90 bp GCGGGGAGATGGGAGGGCCTCCAACAGAAGGAGGTTCTAGAGAGGAGGAAAAGCTGCCACTCAGTCACCTaGATAGGCTGCTCCATCAGG +
Preference number: 5 (lower is better)
Translates to: AGRWEGLQQKEVLERRKSCHSVT*IGCSIR
Trigger: CCTGATGGAGCAGCCTATCAAGGTGACTGAGTGGCA...GCTTTTCCTCCTCTCTAGAACCTCCTTCTGTTGGAGGCCCTCCCATCTCCCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393931.8
CDS-3UTR CAA 90 bp GAAAATCAGACCCAGAGAAGGAACCAAAGCCCTTCCGGGCCCAGGCAGCTGGAGGTTTGGCCCTGGCTGTaGTGGACATCTGGTACTCCA +
Preference number: 5 (lower is better)
Translates to: ENQTQRRNQSPSGPRQLEVWPWL*WTSGTP
Trigger: TGGAGTACCAGATGTCCACAACAGCCAGGGCCAAAC...CTCCAGCTGCCTGGGCCCGGAAGGGCTTTGGTTCCTTCTCTGGGTCTGATTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CAA 90 bp GAACACTATCCCAAGAAAGACCCTACGGAGGACCTCTGGAGGCGCAGGGTGCAGGTTTGGCCCTGGCTGTaGTGGACATCTGGTACTCCA +
Preference number: 5 (lower is better)
Translates to: EHYPKKDPTEDLWRRRVQVWPWL*WTSGTP
Trigger: TGGAGTACCAGATGTCCACAACAGCCAGGGCCAAAC...CTGCACCCTGCGCCTCCAGAGGTCCTCCGTAGGGTCTTTCTTGGGATAGTGTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CAA 90 bp AAAACAGAATGGGTACTTGAGTCTGAAGCTTTAGTGGCCAGGGCCACAGGGGCGTCGTCGTTGAGCAGTTaGGTGAGCTCGGGCAGGGCG +
Preference number: 5 (lower is better)
Translates to: KTEWVLESEALVARATGASSLSS*VSSGRA
Trigger: CGCCCTGCCCGAGCTCACCAAACTGCTCAACGACGA...CGCCCCTGTGGCCCTGGCCACTAAAGCTTCAGACTCAAGTACCCATTCTGTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CAA 90 bp TGGAGGCCCTGGGGGCTTAGGGCAGTTGGTCGGTGGAGTTCAGTGAGAAAATCATGGTACAGGAGCAGGTaGTGCAGCGTGGTGATGGCA +
Preference number: 5 (lower is better)
Translates to: WRPWGLRAVGRWSSVRKSWYRSR*CSVVMA
Trigger: TGCCATCACCACGCTGCACAACCTGCTCCTGTACCA...TGATTTTCTCACTGAACTCCACCGACCAACTGCCCTAAGCCCCCAGGGCCTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CAA 90 bp AGAACACTATCCCAAGAAAGACCCTACGGAGGACCTCTGGAGGCGCAGGGTGCATGGTACAGGAGCAGGTaGTGCAGCGTGGTGATGGCA +
Preference number: 5 (lower is better)
Translates to: RTLSQERPYGGPLEAQGAWYRSR*CSVVMA
Trigger: TGCCATCACCACGCTGCACAACCTGCTCCTGTACCA...TGCACCCTGCGCCTCCAGAGGTCCTCCGTAGGGTCTTTCTTGGGATAGTGTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CAA 90 bp CCCTGGGGGCTTAGGGCAGTTGGTCGGTGGAGTTCAGTGAGAAAATCAGACCCACACACGGATAGCACCTaGAGCACACGACTGGTGGTC +
Preference number: 5 (lower is better)
Translates to: PWGLRAVGRWSSVRKSDPHTDST*STRLVV
Trigger: GACCACCAGTCGTGTGCTCAAGGTGCTATCCGTGTG...TGGGTCTGATTTTCTCACTGAACTCCACCGACCAACTGCCCTAAGCCCCCAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CAA 90 bp AGAACACTATCCCAAGAAAGACCCTACGGAGGACCTCTGGAGGCGCAGGGTGCACACACGGATAGCACCTaGAGCACACGACTGGTGGTC +
Preference number: 5 (lower is better)
Translates to: RTLSQERPYGGPLEAQGAHTDST*STRLVV
Trigger: GACCACCAGTCGTGTGCTCAAGGTGCTATCCGTGTG...TGCACCCTGCGCCTCCAGAGGTCCTCCGTAGGGTCTTTCTTGGGATAGTGTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CAA 90 bp GGGAAAACAGAATGGGTACTTGAGTCTGAAGCTTTAGTGGCCAGGGCCACAGGGGCCACATCTGAGAGGTaGCGCAGGGTCCACAGGCAG +
Preference number: 5 (lower is better)
Translates to: GKTEWVLESEALVARATGATSER*RRVHRQ
Trigger: CTGCCTGTGGACCCTGCGCAACCTCTCAGATGTGGC...CCCTGTGGCCCTGGCCACTAAAGCTTCAGACTCAAGTACCCATTCTGTTTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CAA 90 bp AGAACACTATCCCAAGAAAGACCCTACGGAGGACCTCTGGAGGCGCAGGGTGCAGCACAGGTGAGGACGTaGACGTCATCCACACTCAGC +
Preference number: 5 (lower is better)
Translates to: RTLSQERPYGGPLEAQGAAQVRT*TSSTLS
Trigger: GCTGAGTGTGGATGACGTCAACGTCCTCACCTGTGC...TGCACCCTGCGCCTCCAGAGGTCCTCCGTAGGGTCTTTCTTGGGATAGTGTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CAA 90 bp AGTGAGAAAATCAGACCCAGAGAAGGAACCAAAGCCCTTCCGGGCCCAGGCAGCCACTGGTTGGGCTGGTaGAGCAGCTTCACGATGGCT +
Preference number: 5 (lower is better)
Translates to: SEKIRPREGTKALPGPGSHWLGW*SSFTMA
Trigger: AGCCATCGTGAAGCTGCTCAACCAGCCCAACCAGTG...GCTGCCTGGGCCCGGAAGGGCTTTGGTTCCTTCTCTGGGTCTGATTTTCTCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CAA 90 bp CCCTGGGGGCTTAGGGCAGTTGGTCGGTGGAGTTCAGTGAGAAAATCAGACCCACACTGGTTGGGCTGGTaGAGCAGCTTCACGATGGCT +
Preference number: 5 (lower is better)
Translates to: PWGLRAVGRWSSVRKSDPHWLGW*SSFTMA
Trigger: AGCCATCGTGAAGCTGCTCAACCAGCCCAACCAGTG...TGGGTCTGATTTTCTCACTGAACTCCACCGACCAACTGCCCTAAGCCCCCAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CAA 90 bp TGGAGGCCCTGGGGGCTTAGGGCAGTTGGTCGGTGGAGTTCAGTGAGAAAATCAAAGCCGATGGTTGCCTaGACCAGTGGCCACTGGTTG +
Preference number: 5 (lower is better)
Translates to: WRPWGLRAVGRWSSVRKSKPMVA*TSGHWL
Trigger: CAACCAGTGGCCACTGGTCAAGGCAACCATCGGCTT...TGATTTTCTCACTGAACTCCACCGACCAACTGCCCTAAGCCCCCAGGGCCTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CAA 90 bp GAATGGGTACTTGAGTCTGAAGCTTTAGTGGCCAGGGCCACAGGGGCGGGGAGGAACAGGGGAATGGTGTaGAGCCGGAAGATCTCCATG +
Preference number: 5 (lower is better)
Translates to: EWVLESEALVARATGAGRNRGMV*SRKISM
Trigger: CATGGAGATCTTCCGGCTCAACACCATTCCCCTGTT...CCTCCCCGCCCCTGTGGCCCTGGCCACTAAAGCTTCAGACTCAAGTACCCATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS TCA 90 bp TGGTTCACAGAAGAGGATTCTGTGACCCTCCCAGATGCAGCACCCTaGAGTAGCTGCACCTCCTCCTTCAGACTGGGTGGGCCCCTAGTT +
Preference number: 5 (lower is better)
Translates to: WFTEEDSVTLPDAAP*SSCTSSFRLGGPLV
Trigger: AACTAGGGGCCCACCCAGTCTGAAGGAGGAGGTGCAGCTACTTCAGGGTGCTGCATCTGGGAGGGTCACAGAATCCTCTTCTGTGAACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589036.1
CDS CCA 90 bp AGGGAGGTGAACTTCCCGCTTGGTCTGTGTTTGGCTCCACTGTCCTaGGAACTGACCTGCAGAGGTCAGAGGCCTGATCAAGATCCCCAA +
Preference number: 5 (lower is better)
Translates to: REVNFPLGLCLAPLS*ELTCRGQRPDQDPQ
Trigger: TTGGGGATCTTGATCAGGCCTCTGACCTCTGCAGGTCAGTTCCCAGGACAGTGGAGCCAAACACAGACCAAGCGGGAAGTTCACCTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437369.5
CDS-3UTR CAA 90 bp GGCACTTTTCTGTCTTGCCCCATCGCCTGCACGGAGAGCCTCTCAGATGAGGAATGCCACTCAGTCACCTaGATAGGCTGCTCCATCAGG +
Preference number: 5 (lower is better)
Translates to: GTFLSCPIACTESLSDEECHSVT*IGCSIR
Trigger: CCTGATGGAGCAGCCTATCAAGGTGACTGAGTGGCA...TTCCTCATCTGAGAGGCTCTCCGTGCAGGCGATGGGGCAAGACAGAAAAGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CAA 90 bp AGAACACTATCCCAAGAAAGACCCTACGGAGGACCTCTGGAGGCGCAGGGTGCAGTTTGGCCCTGGCTGTaGTGGACATCTGGTACTCCA +
Preference number: 5 (lower is better)
Translates to: RTLSQERPYGGPLEAQGAVWPWL*WTSGTP
Trigger: TGGAGTACCAGATGTCCACAACAGCCAGGGCCAAAC...TGCACCCTGCGCCTCCAGAGGTCCTCCGTAGGGTCTTTCTTGGGATAGTGTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CAA 90 bp CGTTGCTGGGGGAAAACAGAATGGGTACTTGAGTCTGAAGCTTTAGTGGCCAGGACAATCATGGCCGCCTaGGTCACCACCACCGGGTCC +
Preference number: 5 (lower is better)
Translates to: RCWGKTEWVLESEALVARTIMAA*VTTTGS
Trigger: GGACCCGGTGGTGGTGACCAAGGCGGCCATGATTGT...CCTGGCCACTAAAGCTTCAGACTCAAGTACCCATTCTGTTTTCCCCCAGCAACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CAA 90 bp GAACACTATCCCAAGAAAGACCCTACGGAGGACCTCTGGAGGCGCAGGGTGCAGGTGATGGCCAGGAACTaGGGGTTGTTCTTGTTGAGC +
Preference number: 5 (lower is better)
Translates to: EHYPKKDPTEDLWRRRVQVMARN*GLFLLS
Trigger: GCTCAACAAGAACAACCCCAAGTTCCTGGCCATCAC...CTGCACCCTGCGCCTCCAGAGGTCCTCCGTAGGGTCTTTCTTGGGATAGTGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CAA 90 bp CGTTGCTGGGGGAAAACAGAATGGGTACTTGAGTCTGAAGCTTTAGTGGCCAGGGCCTGGGGCCCACCATaGGCCAGGATGATCAGCTTG +
Preference number: 5 (lower is better)
Translates to: RCWGKTEWVLESEALVARAWGPP*ARMISL
Trigger: CAAGCTGATCATCCTGGCCAATGGTGGGCCCCAGGC...CCTGGCCACTAAAGCTTCAGACTCAAGTACCCATTCTGTTTTCCCCCAGCAACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CAA 90 bp TGGAGGCCCTGGGGGCTTAGGGCAGTTGGTCGGTGGAGTTCAGTGAGAAAATCATTGTTGCATGTCAGGTaGGAGAGTGTGCCCGTGGCA +
Preference number: 5 (lower is better)
Translates to: WRPWGLRAVGRWSSVRKSLLHVR*ESVPVA
Trigger: TGCCACGGGCACACTCTCCAACCTGACATGCAACAA...TGATTTTCTCACTGAACTCCACCGACCAACTGCCCTAAGCCCCCAGGGCCTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CAA 90 bp AGTGAGAAAATCAGACCCAGAGAAGGAACCAAAGCCCTTCCGGGCCCAGGCAGCTTGTTGCATGTCAGGTaGGAGAGTGTGCCCGTGGCA +
Preference number: 5 (lower is better)
Translates to: SEKIRPREGTKALPGPGSLLHVR*ESVPVA
Trigger: TGCCACGGGCACACTCTCCAACCTGACATGCAACAA...GCTGCCTGGGCCCGGAAGGGCTTTGGTTCCTTCTCTGGGTCTGATTTTCTCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CAA 90 bp AAGAGAAAGCCCCTCACCACACACCAGAGGGGTCAGCCAAGAGCACTTCTCGGGACCAGCGTCTTGTTCTaGCTGTTGTTGCATGTCAGG +
Preference number: 5 (lower is better)
Translates to: KRKPLTTHQRGQPRALLGTSVLF*LLLHVR
Trigger: CCTGACATGCAACAACAGCAAGAACAAGACGCTGGT...CCCGAGAAGTGCTCTTGGCTGACCCCTCTGGTGTGTGGTGAGGGGCTTTCTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CAA 90 bp GTTTCAGCGGGGAGATGGGAGGGCCTCCAACAGAAGGAGGTTCTAGAGAGGAGGACCAGCGTCTTGTTCTaGCTGTTGTTGCATGTCAGG +
Preference number: 5 (lower is better)
Translates to: VSAGRWEGLQQKEVLERRTSVLF*LLLHVR
Trigger: CCTGACATGCAACAACAGCAAGAACAAGACGCTGGT...CCTCCTCTCTAGAACCTCCTTCTGTTGGAGGCCCTCCCATCTCCCCGCTGAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393931.8
CDS-3UTR CAA 90 bp AAAACAGAATGGGTACTTGAGTCTGAAGCTTTAGTGGCCAGGGCCACAGGGGCGCACTGGTTGGGCTGGTaGAGCAGCTTCACGATGGCT +
Preference number: 5 (lower is better)
Translates to: KTEWVLESEALVARATGAHWLGW*SSFTMA
Trigger: AGCCATCGTGAAGCTGCTCAACCAGCCCAACCAGTG...CGCCCCTGTGGCCCTGGCCACTAAAGCTTCAGACTCAAGTACCCATTCTGTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CAA 90 bp CCCTGGGGGCTTAGGGCAGTTGGTCGGTGGAGTTCAGTGAGAAAATCAGACCCAAACAGGGGAATGGTGTaGAGCCGGAAGATCTCCATG +
Preference number: 5 (lower is better)
Translates to: PWGLRAVGRWSSVRKSDPNRGMV*SRKISM
Trigger: CATGGAGATCTTCCGGCTCAACACCATTCCCCTGTT...TGGGTCTGATTTTCTCACTGAACTCCACCGACCAACTGCCCTAAGCCCCCAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CAA 90 bp TGGAGGCCCTGGGGGCTTAGGGCAGTTGGTCGGTGGAGTTCAGTGAGAAAATCAAACAGGGGAATGGTGTaGAGCCGGAAGATCTCCATG +
Preference number: 5 (lower is better)
Translates to: WRPWGLRAVGRWSSVRKSNRGMV*SRKISM
Trigger: CATGGAGATCTTCCGGCTCAACACCATTCCCCTGTT...TGATTTTCTCACTGAACTCCACCGACCAACTGCCCTAAGCCCCCAGGGCCTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CAA 90 bp AAAACAGAATGGGTACTTGAGTCTGAAGCTTTAGTGGCCAGGGCCACAGGGGCGTGCTTGAAGAGGGAGTaGGTGAGCTCCACGGACACG +
Preference number: 5 (lower is better)
Translates to: KTEWVLESEALVARATGACLKRE*VSSTDT
Trigger: CGTGTCCGTGGAGCTCACCAACTCCCTCTTCAAGCA...CGCCCCTGTGGCCCTGGCCACTAAAGCTTCAGACTCAAGTACCCATTCTGTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CAA 90 bp AGTTCAGTGAGAAAATCAGACCCAGAGAAGGAACCAAAGCCCTTCCGGGCCCAGAGGCACTTTTCTGTCTaGCCCCATCGCCTGCACGGA +
Preference number: 5 (lower is better)
Translates to: SSVRKSDPEKEPKPFRAQRHFSV*PHRLHG
Trigger: TCCGTGCAGGCGATGGGGCAAGACAGAAAAGTGCCT...CTGGGCCCGGAAGGGCTTTGGTTCCTTCTCTGGGTCTGATTTTCTCACTGAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CAA 90 bp AGTTCAGTGAGAAAATCAGACCCAGAGAAGGAACCAAAGCCCTTCCGGGCCCAGTTGGATTTTGGGGGTTaGGGTCTCGAACCTGGGCCC +
Preference number: 5 (lower is better)
Translates to: SSVRKSDPEKEPKPFRAQLDFGG*GLEPGP
Trigger: GGGCCCAGGTTCGAGACCCAAACCCCCAAAATCCAA...CTGGGCCCGGAAGGGCTTTGGTTCCTTCTCTGGGTCTGATTTTCTCACTGAACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CAA 90 bp CATCCCCACCAAAGACACAAGAAGAAGGCAGGCCAGGGCACACCGTGCTTGGGGGAGAAGTTTTGGATTTaGGGGGTTTGGGTCTCGAAC +
Preference number: 5 (lower is better)
Translates to: HPHQRHKKKAGQGTPCLGEKFWI*GVWVSN
Trigger: GTTCGAGACCCAAACCCCCAAAATCCAAAACTTCTC...CCCCAAGCACGGTGTGCCCTGGCCTGCCTTCTTCTTGTGTCTTTGGTGGGGATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000393931.8
CDS-3UTR CAA 90 bp AGTTCAGTGAGAAAATCAGACCCAGAGAAGGAACCAAAGCCCTTCCGGGCCCAGTGCCACTCAGTCACCTaGATAGGCTGCTCCATCAGG +
Preference number: 5 (lower is better)
Translates to: SSVRKSDPEKEPKPFRAQCHSVT*IGCSIR
Trigger: CCTGATGGAGCAGCCTATCAAGGTGACTGAGTGGCA...CTGGGCCCGGAAGGGCTTTGGTTCCTTCTCTGGGTCTGATTTTCTCACTGAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CAA 90 bp AGTGAGAAAATCAGACCCAGAGAAGGAACCAAAGCCCTTCCGGGCCCAGGCAGCTTGGGGTTGTTCTTGTaGAGCAGGGGCACCATCTTT +
Preference number: 5 (lower is better)
Translates to: SEKIRPREGTKALPGPGSLGLFL*SRGTIF
Trigger: AAAGATGGTGCCCCTGCTCAACAAGAACAACCCCAA...GCTGCCTGGGCCCGGAAGGGCTTTGGTTCCTTCTCTGGGTCTGATTTTCTCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CAA 90 bp CTTCTGGAGCAGGTGACTCACTCCATATCTCCTCCCCATCTCCCCTGGACGGTCGTCTTGTTCTTGCTGTaGTTGCATGTCAGGTTGGAG +
Preference number: 5 (lower is better)
Translates to: LLEQVTHSISPPHLPWTVVLFLL*LHVRLE
Trigger: CTCCAACCTGACATGCAACAACAGCAAGAACAAGAC...GACCGTCCAGGGGAGATGGGGAGGAGATATGGAGTGAGTCACCTGCTCCAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CAA 90 bp GAACACTATCCCAAGAAAGACCCTACGGAGGACCTCTGGAGGCGCAGGGTGCAGGTCTTGTTCTTGCTGTaGTTGCATGTCAGGTTGGAG +
Preference number: 5 (lower is better)
Translates to: EHYPKKDPTEDLWRRRVQVLFLL*LHVRLE
Trigger: CTCCAACCTGACATGCAACAACAGCAAGAACAAGAC...CTGCACCCTGCGCCTCCAGAGGTCCTCCGTAGGGTCTTTCTTGGGATAGTGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CAA 90 bp GTTTCAGCGGGGAGATGGGAGGGCCTCCAACAGAAGGAGGTTCTAGAGAGGAGGGTCTTGTTCTTGCTGTaGTTGCATGTCAGGTTGGAG +
Preference number: 5 (lower is better)
Translates to: VSAGRWEGLQQKEVLERRVLFLL*LHVRLE
Trigger: CTCCAACCTGACATGCAACAACAGCAAGAACAAGAC...CCTCCTCTCTAGAACCTCCTTCTGTTGGAGGCCCTCCCATCTCCCCGCTGAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393931.8
CDS-3UTR CAA 90 bp TTCTGTCTTGCCCCATCGCCTGCACGGAGAGCCTCTCAGATGAGGAACCGCACTTGTGTCACCAGCGTCTaGTTCTTGCTGTTGTTGCAT +
Preference number: 5 (lower is better)
Translates to: FCLAPSPARRASQMRNRTCVTSV*FLLLLH
Trigger: ATGCAACAACAGCAAGAACAAGACGCTGGTGACACA...AGTGCGGTTCCTCATCTGAGAGGCTCTCCGTGCAGGCGATGGGGCAAGACAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310706.9
ENST00000393930.5
CDS-3UTR CAA 90 bp CTTCTGGAGCAGGTGACTCACTCCATATCTCCTCCCCATCTCCCCTGGACGGTCTGTGTCACCAGCGTCTaGTTCTTGCTGTTGTTGCAT +
Preference number: 5 (lower is better)
Translates to: LLEQVTHSISPPHLPWTVCVTSV*FLLLLH
Trigger: ATGCAACAACAGCAAGAACAAGACGCTGGTGACACA...GACCGTCCAGGGGAGATGGGGAGGAGATATGGAGTGAGTCACCTGCTCCAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CAA 90 bp GAAAATCAGACCCAGAGAAGGAACCAAAGCCCTTCCGGGCCCAGGCAGCTGGAGTGTGTCACCAGCGTCTaGTTCTTGCTGTTGTTGCAT +
Preference number: 5 (lower is better)
Translates to: ENQTQRRNQSPSGPRQLECVTSV*FLLLLH
Trigger: ATGCAACAACAGCAAGAACAAGACGCTGGTGACACA...CTCCAGCTGCCTGGGCCCGGAAGGGCTTTGGTTCCTTCTCTGGGTCTGATTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CAA 90 bp CGTTGCTGGGGGAAAACAGAATGGGTACTTGAGTCTGAAGCTTTAGTGGCCAGGAGGCACTTTTCTGTCTaGCCCCATCGCCTGCACGGA +
Preference number: 5 (lower is better)
Translates to: RCWGKTEWVLESEALVARRHFSV*PHRLHG
Trigger: TCCGTGCAGGCGATGGGGCAAGACAGAAAAGTGCCT...CCTGGCCACTAAAGCTTCAGACTCAAGTACCCATTCTGTTTTCCCCCAGCAACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CAA 90 bp GGCACTTTTCTGTCTTGCCCCATCGCCTGCACGGAGAGCCTCTCAGATGAGGAAGAGAAGTTTTGGATTTaGGGGGTTTGGGTCTCGAAC +
Preference number: 5 (lower is better)
Translates to: GTFLSCPIACTESLSDEEEKFWI*GVWVSN
Trigger: GTTCGAGACCCAAACCCCCAAAATCCAAAACTTCTC...TTCCTCATCTGAGAGGCTCTCCGTGCAGGCGATGGGGCAAGACAGAAAAGTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CAA 90 bp AGTGAGAAAATCAGACCCAGAGAAGGAACCAAAGCCCTTCCGGGCCCAGGCAGCGAGAAGTTTTGGATTTaGGGGGTTTGGGTCTCGAAC +
Preference number: 5 (lower is better)
Translates to: SEKIRPREGTKALPGPGSEKFWI*GVWVSN
Trigger: GTTCGAGACCCAAACCCCCAAAATCCAAAACTTCTC...GCTGCCTGGGCCCGGAAGGGCTTTGGTTCCTTCTCTGGGTCTGATTTTCTCACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CAA 90 bp GGGAAAACAGAATGGGTACTTGAGTCTGAAGCTTTAGTGGCCAGGGCCACAGGGTTGGGGTTGTTCTTGTaGAGCAGGGGCACCATCTTT +
Preference number: 5 (lower is better)
Translates to: GKTEWVLESEALVARATGLGLFL*SRGTIF
Trigger: AAAGATGGTGCCCCTGCTCAACAAGAACAACCCCAA...CCCTGTGGCCCTGGCCACTAAAGCTTCAGACTCAAGTACCCATTCTGTTTTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CAA 90 bp CGTTGCTGGGGGAAAACAGAATGGGTACTTGAGTCTGAAGCTTTAGTGGCCAGGGTGATGGCCAGGAACTaGGGGTTGTTCTTGTTGAGC +
Preference number: 5 (lower is better)
Translates to: RCWGKTEWVLESEALVARVMARN*GLFLLS
Trigger: GCTCAACAAGAACAACCCCAAGTTCCTGGCCATCAC...CCTGGCCACTAAAGCTTCAGACTCAAGTACCCATTCTGTTTTCCCCCAGCAACG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CAA 90 bp CGTTGCTGGGGGAAAACAGAATGGGTACTTGAGTCTGAAGCTTTAGTGGCCAGGTTGGGGTTGTTCTTGTaGAGCAGGGGCACCATCTTT +
Preference number: 5 (lower is better)
Translates to: RCWGKTEWVLESEALVARLGLFL*SRGTIF
Trigger: AAAGATGGTGCCCCTGCTCAACAAGAACAACCCCAA...CCTGGCCACTAAAGCTTCAGACTCAAGTACCCATTCTGTTTTCCCCCAGCAACG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS-3UTR CAA 90 bp CGTTGCTGGGGGAAAACAGAATGGGTACTTGAGTCTGAAGCTTTAGTGGCCAGGACCAGCGTCTTGTTCTaGCTGTTGTTGCATGTCAGG +
Preference number: 5 (lower is better)
Translates to: RCWGKTEWVLESEALVARTSVLF*LLLHVR
Trigger: CCTGACATGCAACAACAGCAAGAACAAGACGCTGGT...CCTGGCCACTAAAGCTTCAGACTCAAGTACCCATTCTGTTTTCCCCCAGCAACG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS TCA 72 bp GTCGGGCCGGGGTGGGAGCCGGCGCGGACAGCGAACTaGGCTCGGCGTGGTCGGGCGGCGGCTGCTCCGGAC +
Preference number: 6 (lower is better)
Translates to: VGPGWEPARTAN*ARRGRAAAAPD
Trigger: GTCCGGAGCAGCCGCCGCCCGACCACGCCGAGCTCAGTTCGCTGTCCGCGCCGGCTCCCACCCCGGCCCGAC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310706.9
ENST00000393931.8
ENST00000424457.5
ENST00000589036.1
ENST00000591690.5
CDS CCA 72 bp GTGGGAGCCGGCGCGGACAGCGAACTGAGCTCGGCGTaGTCGGGCGGCGGCTGCTCCGGACTCTGGCCAAGG +
Preference number: 6 (lower is better)
Translates to: VGAGADSELSSA*SGGGCSGLWPR
Trigger: CCTTGGCCAGAGTCCGGAGCAGCCGCCGCCCGACCACGCCGAGCTCAGTTCGCTGTCCGCGCCGGCTCCCAC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393931.8
ENST00000424457.5
ENST00000589036.1
ENST00000591690.5
CDS GCA 72 bp GCCGACTTGAGCAGCTGGGACGGCTCGGCCAGTCGCTaGAGGTTGGTGGCCTGCCCCTCCACCTGGGTGGCC +
Preference number: 6 (lower is better)
Translates to: ADLSSWDGSASR*RLVACPSTWVA
Trigger: GGCCACCCAGGTGGAGGGGCAGGCCACCAACCTGCAGCGACTGGCCGAGCCGTCCCAGCTGCTCAAGTCGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
ENST00000420370.5
ENST00000424457.5
ENST00000437187.5
ENST00000449889.5
CDS CCA 72 bp CCCTCTGCATCAATGGCGTCGGCCGCCTCCTTGTCCTaGGCCAGCTCACACAGCACCCCGGCAGCCACGCGC +
Preference number: 6 (lower is better)
Translates to: PSASMASAASLS*ASSHSTPAATR
Trigger: GCGCGTGGCTGCCGGGGTGCTGTGTGAGCTGGCCCAGGACAAGGAGGCGGCCGACGCCATTGATGCAGAGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS CAA 72 bp GAGGCCCCCTCTGCATCAATGGCGTCGGCCGCCTCCTaGTCCTGGGCCAGCTCACACAGCACCCCGGCAGCC +
Preference number: 6 (lower is better)
Translates to: EAPSASMASAAS*SWASSHSTPAA
Trigger: GGCTGCCGGGGTGCTGTGTGAGCTGGCCCAGGACAAGGAGGCGGCCGACGCCATTGATGCAGAGGGGGCCTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS CAA 90 bp ATGGCCGACTTGAGCAGCTGGGACGGCTCGGCCAGTCGCTGCAGGTaGGTGGCCTGCCCCTCCACCTGGGTGGCCAGCAGAAGCGAGCTG +
Preference number: 6 (lower is better)
Translates to: MADLSSWDGSASRCR*VACPSTWVASRSEL
Trigger: CAGCTCGCTTCTGCTGGCCACCCAGGTGGAGGGGCAGGCCACCAACCTGCAGCGACTGGCCGAGCCGTCCCAGCTGCTCAAGTCGGCCAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
ENST00000420370.5
ENST00000424457.5
ENST00000437187.5
ENST00000449889.5
CDS GCA 72 bp GCAGCCCCTCCCGGTGGTGGGAGAGGTTGTGCAGGATaGTGGTGGTGCAGCGGGCTGTGTCCAGGTCGCTGG +
Preference number: 6 (lower is better)
Translates to: AAPPGGGRGCAG*WWCSGLCPGRW
Trigger: CCAGCGACCTGGACACAGCCCGCTGCACCACCAGCATCCTGCACAACCTCTCCCACCACCGGGAGGGGCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
ENST00000420370.5
ENST00000424457.5
ENST00000437187.5
ENST00000449889.5
CDS GCA 72 bp AGCAGTTGGACGAGGCGGGGGATGACCGCTGCCTCCTaGAGCGGGGCATGGTTGGCTGGGCACAGGGCCAGA +
Preference number: 6 (lower is better)
Translates to: SSWTRRGMTAAS*SGAWLAGHRAR
Trigger: TCTGGCCCTGTGCCCAGCCAACCATGCCCCGCTGCAGGAGGCAGCGGTCATCCCCCGCCTCGTCCAACTGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
ENST00000585793.1
CDS CCA 72 bp TGGCGCTGGGCATCCTGGTGGGCCTTCACCAGCAGTTaGACGAGGCGGGGGATGACCGCTGCCTCCTGCAGC +
Preference number: 6 (lower is better)
Translates to: WRWASWWAFTSS*TRRGMTAASCS
Trigger: GCTGCAGGAGGCAGCGGTCATCCCCCGCCTCGTCCAACTGCTGGTGAAGGCCCACCAGGATGCCCAGCGCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
ENST00000585793.1
CDS CCA 72 bp GGCCTCTGGACTCCGTGCGCTCACCTGCTCGGCAGGTaGGGCCAGAGTCGCTGGGAAAATGTGCGCTCGGCC +
Preference number: 6 (lower is better)
Translates to: GLWTPCAHLLGR*GQSRWENVRSA
Trigger: GGCCGAGCGCACATTTTCCCAGCGACTCTGGCCCCACCTGCCGAGCAGGTGAGCGCACGGAGTCCAGAGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449889.5
ENST00000465293.1
CDS CCA 72 bp TCCGCTGAAGAAGCCAGAGCCGGGCTCCCACCGGCGTaGAGGGAGGCGCCGCAGGTAGTATCGACGAGGCTC +
Preference number: 6 (lower is better)
Translates to: SAEEARAGLPPA*REAPQVVSTRL
Trigger: GAGCCTCGTCGATACTACCTGCGGCGCCTCCCTCCACGCCGGTGGGAGCCCGGCTCTGGCTTCTTCAGCGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449889.5
ENST00000465293.1
CDS CAA 72 bp GTGGCGCTGGGCATCCTGGTGGGCCTTCACCAGCAGTaGGACGAGGCGGGGGATGACCGCTGCCTCCTGCAG +
Preference number: 6 (lower is better)
Translates to: VALGILVGLHQQ*DEAGDDRCLLQ
Trigger: CTGCAGGAGGCAGCGGTCATCCCCCGCCTCGTCCAACTGCTGGTGAAGGCCCACCAGGATGCCCAGCGCCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
ENST00000585793.1
CDS TCA 72 bp GGCTACCTCTGGTGCGAGCTCACTGGCTATCTCGCCTaGCTGTCCCGTGGAGGGGCGGAGCCTCGCCTCCAG +
Preference number: 6 (lower is better)
Translates to: GYLWCELTGYLA*LSRGGAEPRLQ
Trigger: CTGGAGGCGAGGCTCCGCCCCTCCACGGGACAGTCAGGCGAGATAGCCAGTGAGCTCGCACCAGAGGTAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437187.5
CDS GCA 72 bp ATGGCGAGCAGCCCCTCCCGGTGGTGGGAGAGGTTGTaGAGGATGCTGGTGGTGCAGCGGGCTGTGTCCAGG +
Preference number: 6 (lower is better)
Translates to: MASSPSRWWERL*RMLVVQRAVSR
Trigger: CCTGGACACAGCCCGCTGCACCACCAGCATCCTGCACAACCTCTCCCACCACCGGGAGGGGCTGCTCGCCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
ENST00000420370.5
ENST00000424457.5
ENST00000437187.5
ENST00000449889.5
CDS GCA 72 bp CTTCACCAGCAGTTGGACGAGGCGGGGGATGACCGCTaGCTCCTGCAGCGGGGCATGGTTGGCTGGGCACAG +
Preference number: 6 (lower is better)
Translates to: LHQQLDEAGDDR*LLQRGMVGWAQ
Trigger: CTGTGCCCAGCCAACCATGCCCCGCTGCAGGAGGCAGCGGTCATCCCCCGCCTCGTCCAACTGCTGGTGAAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
ENST00000585793.1
CDS GCA 72 bp CTGGAGGGCAGGGCCTCTGGACTCCGTGCGCTCACCTaGTCGGCAGGTGGGGCCAGAGTCGCTGGGAAAATG +
Preference number: 6 (lower is better)
Translates to: LEGRASGLRALT*SAGGARVAGKM
Trigger: CATTTTCCCAGCGACTCTGGCCCCACCTGCCGAGCAGGTGAGCGCACGGAGTCCAGAGGCCCTGCCCTCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449889.5
ENST00000465293.1
CDS CCA 72 bp CCGTCGGCCAGGCGCACGGCCATCTTGGCGCCCTCCTaGTACAGGAGCAGGTTGTGCAGCGTGGTGATGGCA +
Preference number: 6 (lower is better)
Translates to: PSARRTAILAPS*YRSRLCSVVMA
Trigger: TGCCATCACCACGCTGCACAACCTGCTCCTGTACCAGGAGGGCGCCAAGATGGCCGTGCGCCTGGCCGACGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
ENST00000420370.5
ENST00000437187.5
ENST00000449889.5
CDS TCA 72 bp AGGCTGCTCCATCAGGTTCATCACCTCCATCGTGGCTaGGTATGGGGCCTGACCGGGCCGGGTCGGGGTCGG +
Preference number: 6 (lower is better)
Translates to: RLLHQVHHLHRG*VWGLTGPGRGR
Trigger: CCGACCCCGACCCGGCCCGGTCAGGCCCCATACTCAGCCACGATGGAGGTGATGAACCTGATGGAGCAGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589036.1
CDS GCA 72 bp GTGGTGCAGCGGGCTGTGTCCAGGTCGCTGGTATTCTaGATGGTACGCACGACAGCGGCCACCAGCTGGGGC +
Preference number: 6 (lower is better)
Translates to: VVQRAVSRSLVF*MVRTTAATSWG
Trigger: GCCCCAGCTGGTGGCCGCTGTCGTGCGTACCATGCAGAATACCAGCGACCTGGACACAGCCCGCTGCACCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
ENST00000420370.5
ENST00000424457.5
ENST00000437187.5
ENST00000449889.5
CDS GCA 72 bp CAGTTCTGCACCAGGCGGGGGCTGTTGCTGGTCAGGTaGTTGCCCAGGGCCTGCATCCCACCAGCCTCCACA +
Preference number: 6 (lower is better)
Translates to: QFCTRRGLLLVR*LPRACIPPAST
Trigger: TGTGGAGGCTGGTGGGATGCAGGCCCTGGGCAAGCACCTGACCAGCAACAGCCCCCGCCTGGTGCAGAACTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS GCA 72 bp GACAGCGAACTGAGCTCGGCGTGGTCGGGCGGCGGCTaGTCCGGACTCTGGCCAAGGCAGCAACTCAGTAAC +
Preference number: 6 (lower is better)
Translates to: DSELSSAWSGGG*SGLWPRQQLSN
Trigger: GTTACTGAGTTGCTGCCTTGGCCAGAGTCCGGAGCAGCCGCCGCCCGACCACGCCGAGCTCAGTTCGCTGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591690.5
CDS CCA 72 bp GAAGCGAGCTGTCCTCGCCTGACACACCAGGGCACATaGCCTCCCGCACCCGTTTGGCCCTGGCTGTTGTGG +
Preference number: 6 (lower is better)
Translates to: EASCPRLTHQGT*PPAPVWPWLLW
Trigger: CCACAACAGCCAGGGCCAAACGGGTGCGGGAGGCCATGTGCCCTGGTGTGTCAGGCGAGGACAGCTCGCTTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
ENST00000420370.5
ENST00000424457.5
ENST00000437187.5
ENST00000449889.5
ENST00000591690.5
CDS CCA 72 bp TGTGTGCCTGCAGCTACGTGGCGCTGGGCATCCTGGTaGGCCTTCACCAGCAGTTGGACGAGGCGGGGGATG +
Preference number: 6 (lower is better)
Translates to: CVPAATWRWASW*AFTSSWTRRGM
Trigger: CATCCCCCGCCTCGTCCAACTGCTGGTGAAGGCCCACCAGGATGCCCAGCGCCACGTAGCTGCAGGCACACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
ENST00000585793.1
CDS CCA 72 bp AGTGCCCTCGTTGCGGGAGTGCAGCAACTCCATGAGTaGGGCCGAGGCCCCCTCTGCATCAATGGCGTCGGC +
Preference number: 6 (lower is better)
Translates to: SALVAGVQQLHE*GRGPLCINGVG
Trigger: GCCGACGCCATTGATGCAGAGGGGGCCTCGGCCCCACTCATGGAGTTGCTGCACTCCCGCAACGAGGGCACT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS CAA 72 bp TTGGTCACCACCACCGGGTCCTCGTCGTTGAGCAGTTaGGTGAGCTCGGGCAGGGCGCGAGTGGCCAGCTCG +
Preference number: 6 (lower is better)
Translates to: LVTTTGSSSLSS*VSSGRARVASS
Trigger: CGAGCTGGCCACTCGCGCCCTGCCCGAGCTCACCAAACTGCTCAACGACGAGGACCCGGTGGTGGTGACCAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
ENST00000420370.5
ENST00000424457.5
ENST00000437187.5
ENST00000449889.5
CDS CAA 90 bp AGCGTGTACTGGCGCCCGCAGGCCTCATCCTCCTCCATGATGCCCTaGCTGCTGACGGAGGGCACGCAGGTGTTGGCGCCCGAGTGGATA +
Preference number: 6 (lower is better)
Translates to: SVYWRPQASSSSMMP*LLTEGTQVLAPEWI
Trigger: TATCCACTCGGGCGCCAACACCTGCGTGCCCTCCGTCAGCAGCAAGGGCATCATGGAGGAGGATGAGGCCTGCGGGCGCCAGTACACGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
ENST00000420370.5
ENST00000424457.5
ENST00000437187.5
ENST00000437369.5
ENST00000449889.5
ENST00000589036.1
ENST00000591690.5
CDS CAA 90 bp ACAGGGGAGCTGAGCATGCGGACCAGAGCAGGGATGCCACCCGACTaGAAGATGGCGAGCAGCCCCTCCCGGTGGTGGGAGAGGTTGTGC +
Preference number: 6 (lower is better)
Translates to: TGELSMRTRAGMPPD*KMASSPSRWWERLC
Trigger: GCACAACCTCTCCCACCACCGGGAGGGGCTGCTCGCCATCTTCAAGTCGGGTGGCATCCCTGCTCTGGTCCGCATGCTCAGCTCCCCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
ENST00000420370.5
ENST00000437187.5
ENST00000449889.5
CDS CAA 90 bp AGGGGCACCATCTTTTGCAGCCCGTCGGCCAGGCGCACGGCCATCTaGGCGCCCTCCTGGTACAGGAGCAGGTTGTGCAGCGTGGTGATG +
Preference number: 6 (lower is better)
Translates to: RGTIFCSPSARRTAI*APSWYRSRLCSVVM
Trigger: CATCACCACGCTGCACAACCTGCTCCTGTACCAGGAGGGCGCCAAGATGGCCGTGCGCCTGGCCGACGGGCTGCAAAAGATGGTGCCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
ENST00000420370.5
ENST00000437187.5
ENST00000449889.5
CDS TCA 72 bp CTGCTCCATCAGGTTCATCACCTCCATCGTGGCTACTaGGTATGGGGCCTGACCGGGCCGGGTCGGGGTCGG +
Preference number: 6 (lower is better)
Translates to: LLHQVHHLHRGY*VWGLTGPGRGR
Trigger: CCGACCCCGACCCGGCCCGGTCAGGCCCCATACTCAGTAGCCACGATGGAGGTGATGAACCTGATGGAGCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310706.9
ENST00000393931.8
CDS TCA 72 bp TGGCAGTGCCCTCGTTGCGGGAGTGCAGCAACTCCATaGGTGGGGCCGAGGCCCCCTCTGCATCAATGGCGT +
Preference number: 6 (lower is better)
Translates to: WQCPRCGSAATP*VGPRPPLHQWR
Trigger: ACGCCATTGATGCAGAGGGGGCCTCGGCCCCACTCATGGAGTTGCTGCACTCCCGCAACGAGGGCACTGCCA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS CCA 72 bp CCACCCGACTTGAAGATGGCGAGCAGCCCCTCCCGGTaGTGGGAGAGGTTGTGCAGGATGCTGGTGGTGCAG +
Preference number: 6 (lower is better)
Translates to: PPDLKMASSPSR*WERLCRMLVVQ
Trigger: CTGCACCACCAGCATCCTGCACAACCTCTCCCACCACCGGGAGGGGCTGCTCGCCATCTTCAAGTCGGGTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
ENST00000420370.5
ENST00000424457.5
ENST00000437187.5
ENST00000449889.5
CDS CCA 72 bp TGGGCCAGCTCACACAGCACCCCGGCAGCCACGCGCTaGATGTTCTCCACCGACGAGTACAGGAGCTGCACA +
Preference number: 6 (lower is better)
Translates to: WASSHSTPAATR*MFSTDEYRSCT
Trigger: TGTGCAGCTCCTGTACTCGTCGGTGGAGAACATCCAGCGCGTGGCTGCCGGGGTGCTGTGTGAGCTGGCCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS CAA 72 bp ATCTTTTGCAGCCCGTCGGCCAGGCGCACGGCCATCTaGGCGCCCTCCTGGTACAGGAGCAGGTTGTGCAGC +
Preference number: 6 (lower is better)
Translates to: IFCSPSARRTAI*APSWYRSRLCS
Trigger: GCTGCACAACCTGCTCCTGTACCAGGAGGGCGCCAAGATGGCCGTGCGCCTGGCCGACGGGCTGCAAAAGAT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
ENST00000420370.5
ENST00000437187.5
ENST00000449889.5
CDS CAA 72 bp ATGCTCTGGGCAGCCTCCCAGGCAGCCGGGTCATGCTaGAAGAGGGAGTTGGTGAGCTCCACGGACACGCGC +
Preference number: 6 (lower is better)
Translates to: MLWAASQAAGSC*KRELVSSTDTR
Trigger: GCGCGTGTCCGTGGAGCTCACCAACTCCCTCTTCAAGCATGACCCGGCTGCCTGGGAGGCTGCCCAGAGCAT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS CAA 90 bp GGCCAGGAACTTGGGGTTGTTCTTGTTGAGCAGGGGCACCATCTTTaGCAGCCCGTCGGCCAGGCGCACGGCCATCTTGGCGCCCTCCTG +
Preference number: 6 (lower is better)
Translates to: GQELGVVLVEQGHHL*QPVGQAHGHLGALL
Trigger: CAGGAGGGCGCCAAGATGGCCGTGCGCCTGGCCGACGGGCTGCAAAAGATGGTGCCCCTGCTCAACAAGAACAACCCCAAGTTCCTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
ENST00000437187.5
ENST00000449889.5
CDS CAA 90 bp AGCACACTCTCCAGGCCCTCCTGCTTGGTGGCCACATCTGAGAGGTaGCGCAGGGTCCACAGGCAGTTCTGCACCAGGCGGGGGCTGTTG +
Preference number: 6 (lower is better)
Translates to: STLSRPSCLVATSER*RRVHRQFCTRRGLL
Trigger: CAACAGCCCCCGCCTGGTGCAGAACTGCCTGTGGACCCTGCGCAACCTCTCAGATGTGGCCACCAAGCAGGAGGGCCTGGAGAGTGTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS CAA 90 bp GTGAGGTGGCGCAGAGCGCAGACGGCAGGCTCCGTGATGTCGTCCTaGTCACCAGCACGCAGGATGGCATGGATGAGAGCCTCCACACCG +
Preference number: 6 (lower is better)
Translates to: VRWRRAQTAGSVMSS*SPARRMAWMRASTP
Trigger: CGGTGTGGAGGCTCTCATCCATGCCATCCTGCGTGCTGGTGACAAGGACGACATCACGGAGCCTGCCGTCTGCGCTCTGCGCCACCTCAC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS GCA 72 bp CATGCGGTTCATGGGGTCCCGGGCGAGGATGTGCAGTaGTCCGGTGCAGCCCTCCACAATCTCCTCCATCCT +
Preference number: 6 (lower is better)
Translates to: HAVHGVPGEDVQ*SGAALHNLLHP
Trigger: AGGATGGAGGAGATTGTGGAGGGCTGCACCGGAGCACTGCACATCCTCGCCCGGGACCCCATGAACCGCATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
ENST00000585793.1
CDS GCA 72 bp ATCTCCATGCGGTTCATGGGGTCCCGGGCGAGGATGTaGAGTGCTCCGGTGCAGCCCTCCACAATCTCCTCC +
Preference number: 6 (lower is better)
Translates to: ISMRFMGSRARM*SAPVQPSTISS
Trigger: GGAGGAGATTGTGGAGGGCTGCACCGGAGCACTGCACATCCTCGCCCGGGACCCCATGAACCGCATGGAGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
ENST00000585793.1
CDS GCA 72 bp CGCGCTTCCGGTAGTCTGGGTTCTTGTCCTCGGAGATaGGGAACAGGACGGCAGCAGCGTAGGTGGCAGTGC +
Preference number: 6 (lower is better)
Translates to: RASGSLGSCPRR*GTGRQQRRWQC
Trigger: GCACTGCCACCTACGCTGCTGCCGTCCTGTTCCGCATCTCCGAGGACAAGAACCCAGACTACCGGAAGCGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS CCA 72 bp ATCAGGGCCCGCCGCGACGCCTCCTTCTTCGACAGCTaGTTCACAATCATGGCCGCCTTGGTCACCACCACC +
Preference number: 6 (lower is better)
Translates to: IRARRDASFFDS*FTIMAALVTTT
Trigger: GGTGGTGGTGACCAAGGCGGCCATGATTGTGAACCAGCTGTCGAAGAAGGAGGCGTCGCGGCGGGCCCTGAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
ENST00000420370.5
ENST00000424457.5
ENST00000437187.5
ENST00000449889.5
CDS CAA 72 bp CGCAGAGCGCAGACGGCAGGCTCCGTGATGTCGTCCTaGTCACCAGCACGCAGGATGGCATGGATGAGAGCC +
Preference number: 6 (lower is better)
Translates to: RRAQTAGSVMSS*SPARRMAWMRA
Trigger: GGCTCTCATCCATGCCATCCTGCGTGCTGGTGACAAGGACGACATCACGGAGCCTGCCGTCTGCGCTCTGCG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS CAA 90 bp CTGTCCTCGCCTGACACACCAGGGCACATGGCCTCCCGCACCCGTTaGGCCCTGGCTGTTGTGGACATCTGGTACTCCAGATCACCTTGG +
Preference number: 6 (lower is better)
Translates to: LSSPDTPGHMASRTR*ALAVVDIWYSRSPW
Trigger: CCAAGGTGATCTGGAGTACCAGATGTCCACAACAGCCAGGGCCAAACGGGTGCGGGAGGCCATGTGCCCTGGTGTGTCAGGCGAGGACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
ENST00000420370.5
ENST00000424457.5
ENST00000437187.5
ENST00000449889.5
ENST00000591690.5
CDS TCA 72 bp CGCCCTCCTGGTACAGGAGCAGGTTGTGCAGCGTGGTaGTGGCATAGAACAGGACCGACTCCACAGGGGAGC +
Preference number: 6 (lower is better)
Translates to: RPPGTGAGCAAW*WHRTGPTPQGS
Trigger: GCTCCCCTGTGGAGTCGGTCCTGTTCTATGCCATCACCACGCTGCACAACCTGCTCCTGTACCAGGAGGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
ENST00000420370.5
ENST00000437187.5
ENST00000449889.5
CDS TCA 72 bp CACACTCTCCAGGCCCTCCTGCTTGGTGGCCACATCTaGGAGGTTGCGCAGGGTCCACAGGCAGTTCTGCAC +
Preference number: 6 (lower is better)
Translates to: HTLQALLLGGHI*EVAQGPQAVLH
Trigger: GTGCAGAACTGCCTGTGGACCCTGCGCAACCTCTCAGATGTGGCCACCAAGCAGGAGGGCCTGGAGAGTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS GCA 72 bp ACATCTGAGAGGTTGCGCAGGGTCCACAGGCAGTTCTaGACCAGGCGGGGGCTGTTGCTGGTCAGGTGCTTG +
Preference number: 6 (lower is better)
Translates to: TSERLRRVHRQF*TRRGLLLVRCL
Trigger: CAAGCACCTGACCAGCAACAGCCCCCGCCTGGTGCAGAACTGCCTGTGGACCCTGCGCAACCTCTCAGATGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS GCA 72 bp TCATGGGGTCCCGGGCGAGGATGTGCAGTGCTCCGGTaGAGCCCTCCACAATCTCCTCCATCCTCACACCAT +
Preference number: 6 (lower is better)
Translates to: SWGPGRGCAVLR*SPPQSPPSSHH
Trigger: ATGGTGTGAGGATGGAGGAGATTGTGGAGGGCTGCACCGGAGCACTGCACATCCTCGCCCGGGACCCCATGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
ENST00000585793.1
CDS CCA 72 bp ACATGGCCTCCCGCACCCGTTTGGCCCTGGCTGTTGTaGACATCTGGTACTCCAGATCACCTTGGCTGGGGG +
Preference number: 6 (lower is better)
Translates to: TWPPAPVWPWLL*TSGTPDHLGWG
Trigger: CCCCCAGCCAAGGTGATCTGGAGTACCAGATGTCCACAACAGCCAGGGCCAAACGGGTGCGGGAGGCCATGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
ENST00000420370.5
ENST00000424457.5
ENST00000437187.5
ENST00000449889.5
ENST00000591690.5
CDS CCA 72 bp GTTGGTGAGCTCCACGGACACGCGCTTCCGGTAGTCTaGGTTCTTGTCCTCGGAGATGCGGAACAGGACGGC +
Preference number: 6 (lower is better)
Translates to: VGELHGHALPVV*VLVLGDAEQDG
Trigger: GCCGTCCTGTTCCGCATCTCCGAGGACAAGAACCCAGACTACCGGAAGCGCGTGTCCGTGGAGCTCACCAAC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS CAA 72 bp GGCACATGGCCTCCCGCACCCGTTTGGCCCTGGCTGTaGTGGACATCTGGTACTCCAGATCACCTTGGCTGG +
Preference number: 6 (lower is better)
Translates to: GTWPPAPVWPWL*WTSGTPDHLGW
Trigger: CCAGCCAAGGTGATCTGGAGTACCAGATGTCCACAACAGCCAGGGCCAAACGGGTGCGGGAGGCCATGTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
ENST00000420370.5
ENST00000424457.5
ENST00000437187.5
ENST00000449889.5
ENST00000591690.5
CDS CAA 72 bp CTTGGGGTTGTTCTTGTTGAGCAGGGGCACCATCTTTaGCAGCCCGTCGGCCAGGCGCACGGCCATCTTGGC +
Preference number: 6 (lower is better)
Translates to: LGVVLVEQGHHL*QPVGQAHGHLG
Trigger: GCCAAGATGGCCGTGCGCCTGGCCGACGGGCTGCAAAAGATGGTGCCCCTGCTCAACAAGAACAACCCCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
ENST00000437187.5
ENST00000449889.5
CDS CCA 72 bp CACCAGGGCACATGGCCTCCCGCACCCGTTTGGCCCTaGCTGTTGTGGACATCTGGTACTCCAGATCACCTT +
Preference number: 6 (lower is better)
Translates to: HQGTWPPAPVWP*LLWTSGTPDHL
Trigger: AAGGTGATCTGGAGTACCAGATGTCCACAACAGCCAGGGCCAAACGGGTGCGGGAGGCCATGTGCCCTGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
ENST00000420370.5
ENST00000424457.5
ENST00000437187.5
ENST00000449889.5
ENST00000591690.5
CDS TCA 72 bp TGTCGTCCTTGTCACCAGCACGCAGGATGGCATGGATaGGAGCCTCCACACCGCTGTTCTGTGTCACCAGCG +
Preference number: 6 (lower is better)
Translates to: CRPCHQHAGWHG*EPPHRCSVSPA
Trigger: CGCTGGTGACACAGAACAGCGGTGTGGAGGCTCTCATCCATGCCATCCTGCGTGCTGGTGACAAGGACGACA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS CCA 72 bp CTGATCAAGCCGATGGTTGCCTTGACCAGTGGCCACTaGTTGGGCTGGTTGAGCAGCTTCACGATGGCTGGG +
Preference number: 6 (lower is better)
Translates to: LIKPMVALTSGH*LGWLSSFTMAG
Trigger: CCCAGCCATCGTGAAGCTGCTCAACCAGCCCAACCAGTGGCCACTGGTCAAGGCAACCATCGGCTTGATCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
ENST00000585793.1
CDS CCA 72 bp TCTCCAGCGGGTCAAGGGGCACATCGCTGGAGTACATaGGGCGGTAGGTGGCATCCATGTCATCTCCATAGG +
Preference number: 6 (lower is better)
Translates to: SPAGQGAHRWST*GGRWHPCHLHR
Trigger: CCTATGGAGATGACATGGATGCCACCTACCGCCCCATGTACTCCAGCGATGTGCCCCTTGACCCGCTGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS CCA 72 bp CCATGTGCATCTCCAGCGGGTCAAGGGGCACATCGCTaGAGTACATGGGGCGGTAGGTGGCATCCATGTCAT +
Preference number: 6 (lower is better)
Translates to: PCASPAGQGAHR*STWGGRWHPCH
Trigger: ATGACATGGATGCCACCTACCGCCCCATGTACTCCAGCGATGTGCCCCTTGACCCGCTGGAGATGCACATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS CAA 90 bp GCCTCCACACCGCTGTTCTGTGTCACCAGCGTCTTGTTCTTGCTGTaGTTGCATGTCAGGTTGGAGAGTGTGCCCGTGGCACAGGTGAGG +
Preference number: 6 (lower is better)
Translates to: ASTPLFCVTSVLFLL*LHVRLESVPVAQVR
Trigger: CCTCACCTGTGCCACGGGCACACTCTCCAACCTGACATGCAACAACAGCAAGAACAAGACGCTGGTGACACAGAACAGCGGTGTGGAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS CAA 90 bp GCCGAACTTTGTACCAGGGAGGTGAACTTCCCGCTTGGTCTGTGTTaGGCTCCACTGTCCTGGGAACTGACCTGCAGAGGTCAGAGGCTG +
Preference number: 6 (lower is better)
Translates to: AELCTREVNFPLGLC*APLSWELTCRGQRL
Trigger: CAGCCTCTGACCTCTGCAGGTCAGTTCCCAGGACAGTGGAGCCAAACACAGACCAAGCGGGAAGTTCACCTCCCTGGTACAAAGTTCGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424457.5
CDS CAA 90 bp GCCGAACTTTGTACCAGGGAGGTGAACTTCCCGCTTGGTCTGTGTTaGGCTCCACTGTCCTGGGAACTGACCTGCAGAGGTCAGAGGCCT +
Preference number: 6 (lower is better)
Translates to: AELCTREVNFPLGLC*APLSWELTCRGQRP
Trigger: AGGCCTCTGACCTCTGCAGGTCAGTTCCCAGGACAGTGGAGCCAAACACAGACCAAGCGGGAAGTTCACCTCCCTGGTACAAAGTTCGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437369.5
CDS CAA 90 bp GCCGAACTTTGTACCAGGGAGGTGAACTTCCCGCTTGGTCTGTGTTaGGCTCCACTGTCCTGGGAACTGACCTGCAGAGGTCAGAGGCTC +
Preference number: 6 (lower is better)
Translates to: AELCTREVNFPLGLC*APLSWELTCRGQRL
Trigger: GAGCCTCTGACCTCTGCAGGTCAGTTCCCAGGACAGTGGAGCCAAACACAGACCAAGCGGGAAGTTCACCTCCCTGGTACAAAGTTCGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465293.1
CDS CCA 72 bp GTGATGTCGTCCTTGTCACCAGCACGCAGGATGGCATaGATGAGAGCCTCCACACCGCTGTTCTGTGTCACC +
Preference number: 6 (lower is better)
Translates to: VMSSLSPARRMA*MRASTPLFCVT
Trigger: GGTGACACAGAACAGCGGTGTGGAGGCTCTCATCCATGCCATCCTGCGTGCTGGTGACAAGGACGACATCAC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS CCA 72 bp CCACTGGTTGGGCTGGTTGAGCAGCTTCACGATGGCTaGGATGCCATAGTTGAGACGCACAGAGTTCTGGGC +
Preference number: 6 (lower is better)
Translates to: PLVGLVEQLHDG*DAIVETHRVLG
Trigger: GCCCAGAACTCTGTGCGTCTCAACTATGGCATCCCAGCCATCGTGAAGCTGCTCAACCAGCCCAACCAGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
ENST00000585793.1
CDS CAA 72 bp TCCTTCTTCGACAGCTGGTTCACAATCATGGCCGCCTaGGTCACCACCACCGGGTCCTCGTCGTTGAGCAGT +
Preference number: 6 (lower is better)
Translates to: SFFDSWFTIMAA*VTTTGSSSLSS
Trigger: ACTGCTCAACGACGAGGACCCGGTGGTGGTGACCAAGGCGGCCATGATTGTGAACCAGCTGTCGAAGAAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
ENST00000420370.5
ENST00000424457.5
ENST00000437187.5
ENST00000449889.5
CDS CAA 90 bp TCCACACCGCTGTTCTGTGTCACCAGCGTCTTGTTCTTGCTGTTGTaGCATGTCAGGTTGGAGAGTGTGCCCGTGGCACAGGTGAGGACG +
Preference number: 6 (lower is better)
Translates to: STPLFCVTSVLFLLL*HVRLESVPVAQVRT
Trigger: CGTCCTCACCTGTGCCACGGGCACACTCTCCAACCTGACATGCAACAACAGCAAGAACAAGACGCTGGTGACACAGAACAGCGGTGTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS TCA 72 bp ACGAGTACAGGAGCTGCACAAACAGGGGAATGGTGTTaGGCCGGAAGATCTCCATGCGGTTCATGGGGTCCC +
Preference number: 6 (lower is better)
Translates to: TSTGAAQTGEWC*AGRSPCGSWGP
Trigger: GGGACCCCATGAACCGCATGGAGATCTTCCGGCTCAACACCATTCCCCTGTTTGTGCAGCTCCTGTACTCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS TCA 72 bp GGTAGGTGGCATCCATGTCATCTCCATAGGGCTCATTaGTGGGAATCATGCTCTGGGCAGCCTCCCAGGCAG +
Preference number: 6 (lower is better)
Translates to: GRWHPCHLHRAH*WESCSGQPPRQ
Trigger: CTGCCTGGGAGGCTGCCCAGAGCATGATTCCCATCAATGAGCCCTATGGAGATGACATGGATGCCACCTACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS CAA 72 bp GACGAGTACAGGAGCTGCACAAACAGGGGAATGGTGTaGAGCCGGAAGATCTCCATGCGGTTCATGGGGTCC +
Preference number: 6 (lower is better)
Translates to: DEYRSCTNRGMV*SRKISMRFMGS
Trigger: GGACCCCATGAACCGCATGGAGATCTTCCGGCTCAACACCATTCCCCTGTTTGTGCAGCTCCTGTACTCGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS CAA 90 bp ATGAGAGCCTCCACACCGCTGTTCTGTGTCACCAGCGTCTTGTTCTaGCTGTTGTTGCATGTCAGGTTGGAGAGTGTGCCCGTGGCACAG +
Preference number: 6 (lower is better)
Translates to: MRASTPLFCVTSVLF*LLLHVRLESVPVAQ
Trigger: CTGTGCCACGGGCACACTCTCCAACCTGACATGCAACAACAGCAAGAACAAGACGCTGGTGACACAGAACAGCGGTGTGGAGGCTCTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS CAA 90 bp GCATGGATGAGAGCCTCCACACCGCTGTTCTGTGTCACCAGCGTCTaGTTCTTGCTGTTGTTGCATGTCAGGTTGGAGAGTGTGCCCGTG +
Preference number: 6 (lower is better)
Translates to: AWMRASTPLFCVTSV*FLLLLHVRLESVPV
Trigger: CACGGGCACACTCTCCAACCTGACATGCAACAACAGCAAGAACAAGACGCTGGTGACACAGAACAGCGGTGTGGAGGCTCTCATCCATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS GCA 72 bp CCACACCGCTGTTCTGTGTCACCAGCGTCTTGTTCTTaGTGTTGTTGCATGTCAGGTTGGAGAGTGTGCCCG +
Preference number: 6 (lower is better)
Translates to: PHRCSVSPASCS*CCCMSGWRVCP
Trigger: CGGGCACACTCTCCAACCTGACATGCAACAACAGCAAGAACAAGACGCTGGTGACACAGAACAGCGGTGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS CCA 72 bp AACTTCCCGCTTGGTCTGTGTTTGGCTCCACTGTCCTaGGAACTGACCTGCAGAGGTCAGAGGCTGAGTATG +
Preference number: 6 (lower is better)
Translates to: NFPLGLCLAPLS*ELTCRGQRLSM
Trigger: CATACTCAGCCTCTGACCTCTGCAGGTCAGTTCCCAGGACAGTGGAGCCAAACACAGACCAAGCGGGAAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424457.5
CDS CCA 72 bp AACTTCCCGCTTGGTCTGTGTTTGGCTCCACTGTCCTaGGAACTGACCTGCAGAGGTCAGAGGCCTGATCAA +
Preference number: 6 (lower is better)
Translates to: NFPLGLCLAPLS*ELTCRGQRPDQ
Trigger: TTGATCAGGCCTCTGACCTCTGCAGGTCAGTTCCCAGGACAGTGGAGCCAAACACAGACCAAGCGGGAAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437369.5
CDS CAA 90 bp TTCTGTGTCACCAGCGTCTTGTTCTTGCTGTTGTTGCATGTCAGGTaGGAGAGTGTGCCCGTGGCACAGGTGAGGACGTTGACGTCATCC +
Preference number: 6 (lower is better)
Translates to: FCVTSVLFLLLLHVR*ESVPVAQVRTLTSS
Trigger: GGATGACGTCAACGTCCTCACCTGTGCCACGGGCACACTCTCCAACCTGACATGCAACAACAGCAAGAACAAGACGCTGGTGACACAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS TCA 72 bp GTGGCAACTTTCCTCCAAACTCCTCCAAAGACCTCTTaGTACCTGGTCCAGGCCTCCCAAATCTGGGACTCC +
Preference number: 6 (lower is better)
Translates to: VATFLQTPPKTS*YLVQASQIWDS
Trigger: GGAGTCCCAGATTTGGGAGGCCTGGACCAGGTATCAAGAGGTCTTTGGAGGAGTTTGGAGGAAAGTTGCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585793.1
CDS GCA 72 bp TGTTCTGTGTCACCAGCGTCTTGTTCTTGCTGTTGTTaGATGTCAGGTTGGAGAGTGTGCCCGTGGCACAGG +
Preference number: 6 (lower is better)
Translates to: CSVSPASCSCCC*MSGWRVCPWHR
Trigger: CCTGTGCCACGGGCACACTCTCCAACCTGACATGCAACAACAGCAAGAACAAGACGCTGGTGACACAGAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS GCA 72 bp GTGTATGTCTGCTGCCACTCAGTCACCTTGATAGGCTaGTCCATCAGGTTCATCACCTCCATCGTGGCTACC +
Preference number: 6 (lower is better)
Translates to: VYVCCHSVTLIG*SIRFITSIVAT
Trigger: GGTAGCCACGATGGAGGTGATGAACCTGATGGAGCAGCCTATCAAGGTGACTGAGTGGCAGCAGACATACAC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393930.5
ENST00000437187.5
CDS GCA 72 bp GTGTATGTCTGCTGCCACTCAGTCACCTTGATAGGCTaGTCCATCAGGTTCATCACCTCCATCGTGGCTGAG +
Preference number: 6 (lower is better)
Translates to: VYVCCHSVTLIG*SIRFITSIVAE
Trigger: CTCAGCCACGATGGAGGTGATGAACCTGATGGAGCAGCCTATCAAGGTGACTGAGTGGCAGCAGACATACAC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589036.1
CDS CAA 72 bp ATGGCAGGCTTATTGCTGGGACACACGGATAGCACCTaGAGCACACGACTGGTGGTCCAGAGCAGCTTTTCA +
Preference number: 6 (lower is better)
Translates to: MAGLLLGHTDST*STRLVVQSSFS
Trigger: TGAAAAGCTGCTCTGGACCACCAGTCGTGTGCTCAAGGTGCTATCCGTGTGTCCCAGCAATAAGCCTGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS CAA 72 bp CTGTTCTGTGTCACCAGCGTCTTGTTCTTGCTGTTGTaGCATGTCAGGTTGGAGAGTGTGCCCGTGGCACAG +
Preference number: 6 (lower is better)
Translates to: LFCVTSVLFLLL*HVRLESVPVAQ
Trigger: CTGTGCCACGGGCACACTCTCCAACCTGACATGCAACAACAGCAAGAACAAGACGCTGGTGACACAGAACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS CAA 72 bp TCCACACCGCTGTTCTGTGTCACCAGCGTCTTGTTCTaGCTGTTGTTGCATGTCAGGTTGGAGAGTGTGCCC +
Preference number: 6 (lower is better)
Translates to: STPLFCVTSVLF*LLLHVRLESVP
Trigger: GGGCACACTCTCCAACCTGACATGCAACAACAGCAAGAACAAGACGCTGGTGACACAGAACAGCGGTGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS GCA 72 bp GTGTATGTCTGCTGCCACTCAGTCACCTTGATAGGCTaGTCCATCAGGTTCATCACCTCCATCGTGGCTACT +
Preference number: 6 (lower is better)
Translates to: VYVCCHSVTLIG*SIRFITSIVAT
Trigger: AGTAGCCACGATGGAGGTGATGAACCTGATGGAGCAGCCTATCAAGGTGACTGAGTGGCAGCAGACATACAC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000310706.9
ENST00000393931.8
ENST00000420370.5
ENST00000424457.5
ENST00000437369.5
ENST00000449889.5
ENST00000591690.5
CDS CAA 72 bp AGAGCCTCCACACCGCTGTTCTGTGTCACCAGCGTCTaGTTCTTGCTGTTGTTGCATGTCAGGTTGGAGAGT +
Preference number: 6 (lower is better)
Translates to: RASTPLFCVTSV*FLLLLHVRLES
Trigger: ACTCTCCAACCTGACATGCAACAACAGCAAGAACAAGACGCTGGTGACACAGAACAGCGGTGTGGAGGCTCT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310706.9
ENST00000393930.5
ENST00000393931.8
CDS CAA 72 bp AGTGGCAACTTTCCTCCAAACTCCTCCAAAGACCTCTaGATACCTGGTCCAGGCCTCCCAAATCTGGGACTC +
Preference number: 6 (lower is better)
Translates to: SGNFPPNSSKDL*IPGPGLPNLGL
Trigger: GAGTCCCAGATTTGGGAGGCCTGGACCAGGTATCAAGAGGTCTTTGGAGGAGTTTGGAGGAAAGTTGCCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585793.1
CDS CAA 90 bp TCAATCTGGAGTGGCAACTTTCCTCCAAACTCCTCCAAAGACCTCTaGATACCTGGTCCAGGCCTCCCAAATCTGGGACTCCTAACCTTG +
Preference number: 6 (lower is better)
Translates to: SIWSGNFPPNSSKDL*IPGPGLPNLGLLTL
Trigger: CAAGGTTAGGAGTCCCAGATTTGGGAGGCCTGGACCAGGTATCAAGAGGTCTTTGGAGGAGTTTGGAGGAAAGTTGCCACTCCAGATTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585793.1
CDS CCA 72 bp CTTTCCTCCAAACTCCTCCAAAGACCTCTTGATACCTaGTCCAGGCCTCCCAAATCTGGGACTCCTAACCTT +
Preference number: 6 (lower is better)
Translates to: LSSKLLQRPLDT*SRPPKSGTPNL
Trigger: AAGGTTAGGAGTCCCAGATTTGGGAGGCCTGGACCAGGTATCAAGAGGTCTTTGGAGGAGTTTGGAGGAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585793.1
CDS CAA 90 bp TCTTTCCTTGCTTTGAAGCTTAGAAAGCCATGCCCATGCAGGGGGTaGCTAAGTAGTCAATCTGGAGTGGCAACTTTCCTCCAAACTCCT +
Preference number: 6 (lower is better)
Translates to: SFLALKLRKPCPCRG*LSSQSGVATFLQTP
Trigger: AGGAGTTTGGAGGAAAGTTGCCACTCCAGATTGACTACTTAGCAACCCCCTGCATGGGCATGGCTTTCTAAGCTTCAAAGCAAGGAAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585793.1
CDS GCA 72 bp CTAGCATTGAAGAAACCTTCCCCCAAAAAGCCTTCCTaGGGTCTCACTTTCCCTGTCAAATTCTTTCAGGAA +
Preference number: 6 (lower is better)
Translates to: LALKKPSPKKPS*GLTFPVKFFQE
Trigger: TTCCTGAAAGAATTTGACAGGGAAAGTGAGACCGCAGGAAGGCTTTTTGGGGGAAGGTTTCTTCAATGCTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000393930.5
ENST00000437369.5