RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for JUN (Homo sapiens)

Ensembl gene IDs: ENSG00000177606

Ensembl transcript IDs: ENST00000371222.4, ENST00000678696.1

Found 304 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GACAGCCCGTCCGCAAAGCGGGGCAGCCCGCAGGCGGCCGCTCCCTaGCTCCACGCCAAGGGAGGGCGCGCCAAGTCCTTCCCACTCGTG +
Preference number: 1 (lower is better)
Translates to: DSPSAKRGSPQAAAP*LHAKGGRAKSFPLV
Trigger: CACGAGTGGGAAGGACTTGGCGCGCCCTCCCTTGGCGTGGAGCCAGGGAGCGGCCGCCTGCGGGCTGCCCCGCTTTGCGGACGGGCTGTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
3UTR GCA 90 bp CCTGGCTCCACGCCAAGGGAGGGCGCGCCAAGTCCTTCCCACTCGTaGACACTGGGGGCGCCGTCAGGACGCAACCCAGTCCAACTTGGA +
Preference number: 1 (lower is better)
Translates to: PGSTPREGAPSPSHS*TLGAPSGRNPVQLG
Trigger: TCCAAGTTGGACTGGGTTGCGTCCTGACGGCGCCCCCAGTGTGCACGAGTGGGAAGGACTTGGCGCGCCCTCCCTTGGCGTGGAGCCAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
3UTR CCA 90 bp CCACGCCAAGGGAGGGCGCGCCAAGTCCTTCCCACTCGTGCACACTaGGGGCGCCGTCAGGACGCAACCCAGTCCAACTTGGATACCCTT +
Preference number: 1 (lower is better)
Translates to: PRQGRARQVLPTRAH*GRRQDATQSNLDTL
Trigger: AAGGGTATCCAAGTTGGACTGGGTTGCGTCCTGACGGCGCCCCCAGTGTGCACGAGTGGGAAGGACTTGGCGCGCCCTCCCTTGGCGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
3UTR CCA 90 bp CTCCATGAGGGAAGGCATCCTGTTGCTTTCACTCTTCTGTGTTCCTaGTTTCTAGCTTCTTCTTCACCAATCCATCCTCCAAACTGTTGC +
Preference number: 1 (lower is better)
Translates to: LHEGRHPVAFTLLCS*FLASSSPIHPPNCC
Trigger: GCAACAGTTTGGAGGATGGATTGGTGAAGAAGAAGCTAGAAACCAGGAACACAGAAGAGTGAAAGCAACAGGATGCCTTCCCTCATGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678696.1
3UTR CCA 90 bp CCGTCACCTGCATTAGTGGAGGCAGGAAGGGACACTGTGTGTGGCTaGATGTATGAATGTGCTAACAGCTTAATTCTTTTAAGAACACTC +
Preference number: 1 (lower is better)
Translates to: PSPALVEAGRDTVCG*MYECANSLILLRTL
Trigger: GAGTGTTCTTAAAAGAATTAAGCTGTTAGCACATTCATACATCCAGCCACACACAGTGTCCCTTCCTGCCTCCACTAATGCAGGTGACGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678696.1
3UTR TCA 90 bp CCAATCCATCCTCCAAACTGTTGCCAGCATGAATCATTCTTAAGCTaGGGGTATTATGTCCCCACTCTGTTTCAAATTCACCTGCTTTCT +
Preference number: 1 (lower is better)
Translates to: PIHPPNCCQHESFLS*GYYVPTLFQIHLLS
Trigger: AGAAAGCAGGTGAATTTGAAACAGAGTGGGGACATAATACCCTCAGCTTAAGAATGATTCATGCTGGCAACAGTTTGGAGGATGGATTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678696.1
3UTR TCA 90 bp TCTAGCTTCTTCTTCACCAATCCATCCTCCAAACTGTTGCCAGCATaGATCATTCTTAAGCTGAGGGTATTATGTCCCCACTCTGTTTCA +
Preference number: 1 (lower is better)
Translates to: SSFFFTNPSSKLLPA*IILKLRVLCPHSVS
Trigger: TGAAACAGAGTGGGGACATAATACCCTCAGCTTAAGAATGATTCATGCTGGCAACAGTTTGGAGGATGGATTGGTGAAGAAGAAGCTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678696.1
3UTR-3UTR CCA 90 bp TCCGTTCGCGCGGGGACAGCCCGTCCGCAAAGCGGGGCAGCCCGCAGGCGGCCGCCCACTCGTGCACACTaGGGGCGCCGTCAGGACGCA +
Preference number: 2 (lower is better)
Translates to: SVRAGTARPQSGAARRRPPTRAH*GRRQDA
Trigger: TGCGTCCTGACGGCGCCCCCAGTGTGCACGAGTGGG...CGGCCGCCTGCGGGCTGCCCCGCTTTGCGGACGGGCTGTCCCCGCGCGAACGGA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
3UTR-3UTR GCA 90 bp CGTTCGCGCGGGGACAGCCCGTCCGCAAAGCGGGGCAGCCCGCAGGCGGCCGCTAGTCCTTCCCACTCGTaGACACTGGGGGCGCCGTCA +
Preference number: 2 (lower is better)
Translates to: RSRGDSPSAKRGSPQAAASPSHS*TLGAPS
Trigger: TGACGGCGCCCCCAGTGTGCACGAGTGGGAAGGACT...AGCGGCCGCCTGCGGGCTGCCCCGCTTTGCGGACGGGCTGTCCCCGCGCGAACG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
3UTR-3UTR CCA 90 bp CCATCACGAGTTATGCACACAGTTAACGAAGGCAGGCCAGAAAGAGTTCATCTGCAGGCGGCCGCTCCCTaGCTCCACGCCAAGGGAGGG +
Preference number: 2 (lower is better)
Translates to: PSRVMHTVNEGRPERVHLQAAAP*LHAKGG
Trigger: CCCTCCCTTGGCGTGGAGCCAGGGAGCGGCCGCCTG...CAGATGAACTCTTTCTGGCCTGCCTTCGTTAACTGTGTGCATAACTCGTGATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678696.1
3UTR-3UTR CCA 90 bp CCATCACGAGTTATGCACACAGTTAACGAAGGCAGGCCAGAAAGAGTTCATCTGCCCACTCGTGCACACTaGGGGCGCCGTCAGGACGCA +
Preference number: 2 (lower is better)
Translates to: PSRVMHTVNEGRPERVHLPTRAH*GRRQDA
Trigger: TGCGTCCTGACGGCGCCCCCAGTGTGCACGAGTGGG...CAGATGAACTCTTTCTGGCCTGCCTTCGTTAACTGTGTGCATAACTCGTGATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678696.1
3UTR-3UTR CCA 90 bp TCGAATGTTAGGTCCATGCAGTTCTTGGTCAATGTTAACGAAAAGTCCAACGTTCAGGCGGCCGCTCCCTaGCTCCACGCCAAGGGAGGG +
Preference number: 2 (lower is better)
Translates to: SNVRSMQFLVNVNEKSNVQAAAP*LHAKGG
Trigger: CCCTCCCTTGGCGTGGAGCCAGGGAGCGGCCGCCTG...AACGTTGGACTTTTCGTTAACATTGACCAAGAACTGCATGGACCTAACATTCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
3UTR-3UTR GCA 90 bp TATTATGTCCCCACTCTGTTTCAAATTCACCTGCTTTCTCCGTCACCTGCATTAAGTCCTTCCCACTCGTaGACACTGGGGGCGCCGTCA +
Preference number: 2 (lower is better)
Translates to: YYVPTLFQIHLLSPSPALSPSHS*TLGAPS
Trigger: TGACGGCGCCCCCAGTGTGCACGAGTGGGAAGGACT...TAATGCAGGTGACGGAGAAAGCAGGTGAATTTGAAACAGAGTGGGGACATAATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000678696.1
3UTR-3UTR CCA 90 bp TTAACGAAGGCAGGCCAGAAAGAGTTCATCTGTAGGCTCAGCCTCGCTCTCACAGGTCCATGCAGTTCTTaGTCAATGTTAACGAAAAGT +
Preference number: 2 (lower is better)
Translates to: LTKAGQKEFICRLSLALTGPCSS*SMLTKS
Trigger: ACTTTTCGTTAACATTGACCAAGAACTGCATGGACC...TGTGAGAGCGAGGCTGAGCCTACAGATGAACTCTTTCTGGCCTGCCTTCGTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
3UTR-3UTR TCA 90 bp CATGAGGGAAGGCATCCTGTTGCTTTCACTCTTCTGTGTTCCTGGTTTCTAGCTCCCTTTAATACTGAATaGGATCGAATGTTAGGTCCA +
Preference number: 2 (lower is better)
Translates to: HEGRHPVAFTLLCSWFLAPFNTE*DRMLGP
Trigger: TGGACCTAACATTCGATCTCATTCAGTATTAAAGGG...AGCTAGAAACCAGGAACACAGAAGAGTGAAAGCAACAGGATGCCTTCCCTCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678696.1
3UTR CAA 90 bp CATTATAAATGGTCACAGCACATGCCACTTGATACAATCCAAACTTaGAAATGTTTGACTTCTCAGTGGGCTGTCCCTCTCCACTGCAAC +
Preference number: 2 (lower is better)
Translates to: HYKWSQHMPLDTIQT*KCLTSQWAVPLHCN
Trigger: GTTGCAGTGGAGAGGGACAGCCCACTGAGAAGTCAAACATTTCAAAGTTTGGATTGTATCAAGTGGCATGTGCTGTGACCATTTATAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371222.4
3UTR-3UTR GCA 90 bp CATCACGAGTTATGCACACAGTTAACGAAGGCAGGCCAGAAAGAGTTCATCTGTCGAATGTTAGGTCCATaGAGTTCTTGGTCAATGTTA +
Preference number: 2 (lower is better)
Translates to: HHELCTQLTKAGQKEFICRMLGP*SSWSML
Trigger: TAACATTGACCAAGAACTGCATGGACCTAACATTCG...ACAGATGAACTCTTTCTGGCCTGCCTTCGTTAACTGTGTGCATAACTCGTGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678696.1
3UTR-3UTR GCA 90 bp GGAAGGCATCCTGTTGCTTTCACTCTTCTGTGTTCCTGGTTTCTAGCTTCTTCTCATCCTCCAAACTGTTaGCAGCATGAATCATTCTTA +
Preference number: 2 (lower is better)
Translates to: GRHPVAFTLLCSWFLASSHPPNC*QHESFL
Trigger: TAAGAATGATTCATGCTGGCAACAGTTTGGAGGATG...AGAAGAAGCTAGAAACCAGGAACACAGAAGAGTGAAAGCAACAGGATGCCTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678696.1
3UTR CCA 72 bp TCCGCAAAGCGGGGCAGCCCGCAGGCGGCCGCTCCCTaGCTCCACGCCAAGGGAGGGCGCGCCAAGTCCTTC +
Preference number: 3 (lower is better)
Translates to: SAKRGSPQAAAP*LHAKGGRAKSF
Trigger: GAAGGACTTGGCGCGCCCTCCCTTGGCGTGGAGCCAGGGAGCGGCCGCCTGCGGGCTGCCCCGCTTTGCGGA
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
3UTR GCA 72 bp ACGCCAAGGGAGGGCGCGCCAAGTCCTTCCCACTCGTaGACACTGGGGGCGCCGTCAGGACGCAACCCAGTC +
Preference number: 3 (lower is better)
Translates to: TPREGAPSPSHS*TLGAPSGRNPV
Trigger: GACTGGGTTGCGTCCTGACGGCGCCCCCAGTGTGCACGAGTGGGAAGGACTTGGCGCGCCCTCCCTTGGCGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
3UTR CCA 72 bp GGGAGGGCGCGCCAAGTCCTTCCCACTCGTGCACACTaGGGGCGCCGTCAGGACGCAACCCAGTCCAACTTG +
Preference number: 3 (lower is better)
Translates to: GRARQVLPTRAH*GRRQDATQSNL
Trigger: CAAGTTGGACTGGGTTGCGTCCTGACGGCGCCCCCAGTGTGCACGAGTGGGAAGGACTTGGCGCGCCCTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
3UTR CCA 72 bp ACTGGGGGCGCCGTCAGGACGCAACCCAGTCCAACTTaGATACCCTTGGCTTTAGTTCTCGGACACTTCTTT +
Preference number: 3 (lower is better)
Translates to: TGGAVRTQPSPT*IPLALVLGHFF
Trigger: AAAGAAGTGTCCGAGAACTAAAGCCAAGGGTATCCAAGTTGGACTGGGTTGCGTCCTGACGGCGCCCCCAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
3UTR-3UTR CAA 90 bp TCAATGTTAACGAAAAGTCCAACGTTCCGTTCGCGCGGGGACAGCCCGTCCGCACCAACTTGGATACCCTaGGCTTTAGTTCTCGGACAC +
Preference number: 3 (lower is better)
Translates to: SMLTKSPTFRSRGDSPSAPTWIP*ALVLGH
Trigger: GTGTCCGAGAACTAAAGCCAAGGGTATCCAAGTTGG...TGCGGACGGGCTGTCCCCGCGCGAACGGAACGTTGGACTTTTCGTTAACATTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
3UTR-3UTR CAA 90 bp TTATGCACACAGTTAACGAAGGCAGGCCAGAAAGAGTTCATCTGTAGGCTCAGCTCTCTCCGTCGCAACTaGTCAAGTTCTCAAGTCTGT +
Preference number: 3 (lower is better)
Translates to: LCTQLTKAGQKEFICRLSSLRRN*SSSQVC
Trigger: ACAGACTTGAGAACTTGACAAGTTGCGACGGAGAGA...GCTGAGCCTACAGATGAACTCTTTCTGGCCTGCCTTCGTTAACTGTGTGCATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678696.1
3UTR-3UTR CAA 90 bp CATGAGGGAAGGCATCCTGTTGCTTTCACTCTTCTGTGTTCCTGGTTTCTAGCTAATCTACAGTCTCTATaGCAGTTTGTAACCCCCTCC +
Preference number: 3 (lower is better)
Translates to: HEGRHPVAFTLLCSWFLANLQSL*QFVTPS
Trigger: GGAGGGGGTTACAAACTGCAATAGAGACTGTAGATT...AGCTAGAAACCAGGAACACAGAAGAGTGAAAGCAACAGGATGCCTTCCCTCATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000678696.1
3UTR-3UTR CAA 90 bp TATTATGTCCCCACTCTGTTTCAAATTCACCTGCTTTCTCCGTCACCTGCATTACCAACTTGGATACCCTaGGCTTTAGTTCTCGGACAC +
Preference number: 3 (lower is better)
Translates to: YYVPTLFQIHLLSPSPALPTWIP*ALVLGH
Trigger: GTGTCCGAGAACTAAAGCCAAGGGTATCCAAGTTGG...TAATGCAGGTGACGGAGAAAGCAGGTGAATTTGAAACAGAGTGGGGACATAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678696.1
3UTR CCA 72 bp GCATTAGTGGAGGCAGGAAGGGACACTGTGTGTGGCTaGATGTATGAATGTGCTAACAGCTTAATTCTTTTA +
Preference number: 3 (lower is better)
Translates to: ALVEAGRDTVCG*MYECANSLILL
Trigger: TAAAAGAATTAAGCTGTTAGCACATTCATACATCCAGCCACACACAGTGTCCCTTCCTGCCTCCACTAATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678696.1
3UTR-3UTR CAA 90 bp TCGAATGTTAGGTCCATGCAGTTCTTGGTCAATGTTAACGAAAAGTCCAACGTTTCTCTCCGTCGCAACTaGTCAAGTTCTCAAGTCTGT +
Preference number: 3 (lower is better)
Translates to: SNVRSMQFLVNVNEKSNVSLRRN*SSSQVC
Trigger: ACAGACTTGAGAACTTGACAAGTTGCGACGGAGAGA...AACGTTGGACTTTTCGTTAACATTGACCAAGAACTGCATGGACCTAACATTCGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
3UTR TCA 72 bp CCTCCAAACTGTTGCCAGCATGAATCATTCTTAAGCTaGGGGTATTATGTCCCCACTCTGTTTCAAATTCAC +
Preference number: 3 (lower is better)
Translates to: PPNCCQHESFLS*GYYVPTLFQIH
Trigger: GTGAATTTGAAACAGAGTGGGGACATAATACCCTCAGCTTAAGAATGATTCATGCTGGCAACAGTTTGGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678696.1
CDS-3UTR TCA 90 bp TCCGTTCGCGCGGGGACAGCCCGTCCGCAAAGCGGGGCAGCCCGCAGGCGGCCGCGGGCGACGCCAGCTTaGGCAGCCCCACGTCGGGCG +
Preference number: 4 (lower is better)
Translates to: SVRAGTARPQSGAARRRPRATPA*AAPRRA
Trigger: CGCCCGACGTGGGGCTGCTCAAGCTGGCGTCGCCCG...CGGCCGCCTGCGGGCTGCCCCGCTTTGCGGACGGGCTGTCCCCGCGCGAACGGA
79% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS-3UTR TCA 90 bp CGTTCGCGCGGGGACAGCCCGTCCGCAAAGCGGGGCAGCCCGCAGGCGGCCGCTCCATGCCTGCCCCGTTaGCCGGCTGCGCCGCCGACG +
Preference number: 4 (lower is better)
Translates to: RSRGDSPSAKRGSPQAAAPCLPR*PAAPPT
Trigger: CGTCGGCGGCGCAGCCGGTCAACGGGGCAGGCATGG...AGCGGCCGCCTGCGGGCTGCCCCGCTTTGCGGACGGGCTGTCCCCGCGCGAACG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS-3UTR GCA 90 bp TCCGTTCGCGCGGGGACAGCCCGTCCGCAAAGCGGGGCAGCCCGCAGGCGGCCGGATCAGTGCGGACCCTaGAGTGGCCGGCCGGCGGCG +
Preference number: 4 (lower is better)
Translates to: SVRAGTARPQSGAARRRPDQCGP*SGRPAA
Trigger: CGCCGCCGGCCGGCCACTGCAGGGTCCGCACTGATC...CGGCCGCCTGCGGGCTGCCCCGCTTTGCGGACGGGCTGTCCCCGCGCGAACGGA
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS-3UTR CCA 90 bp CGTTCGCGCGGGGACAGCCCGTCCGCAAAGCGGGGCAGCCCGCAGGCGGCCGCTAGCGCACGCACCCGCTaGCTGTCGTCCCCGCTGCGC +
Preference number: 4 (lower is better)
Translates to: RSRGDSPSAKRGSPQAAASARTR*LSSPLR
Trigger: GCGCAGCGGGGACGACAGCCAGCGGGTGCGTGCGCT...AGCGGCCGCCTGCGGGCTGCCCCGCTTTGCGGACGGGCTGTCCCCGCGCGAACG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS-3UTR GCA 90 bp TCCGTTCGCGCGGGGACAGCCCGTCCGCAAAGCGGGGCAGCCCGCAGGCGGCCGCGCGGAGCGGATCAGTaGGGACCCTGCAGTGGCCGG +
Preference number: 4 (lower is better)
Translates to: SVRAGTARPQSGAARRRPRGADQ*GPCSGR
Trigger: CCGGCCACTGCAGGGTCCGCACTGATCCGCTCCGCG...CGGCCGCCTGCGGGCTGCCCCGCTTTGCGGACGGGCTGTCCCCGCGCGAACGGA
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS-3UTR GCA 90 bp CGTTCGCGCGGGGACAGCCCGTCCGCAAAGCGGGGCAGCCCGCAGGCGGCCGCTGGCGGCTGCTGCTGCTaGTGGGGTTGCGCGGGAAAG +
Preference number: 4 (lower is better)
Translates to: RSRGDSPSAKRGSPQAAAGGCCC*WGCAGK
Trigger: CTTTCCCGCGCAACCCCAGCAGCAGCAGCAGCCGCC...AGCGGCCGCCTGCGGGCTGCCCCGCTTTGCGGACGGGCTGTCCCCGCGCGAACG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS-3UTR TCA 90 bp CGTTCGCGCGGGGACAGCCCGTCCGCAAAGCGGGGCAGCCCGCAGGCGGCCGCTGTCGCGGTCACTCACTaGGCGCTCTTCGTGCGCAGC +
Preference number: 4 (lower is better)
Translates to: RSRGDSPSAKRGSPQAAAVAVTH*ALFVRS
Trigger: GCTGCGCACGAAGAGCGCTCAGTGAGTGACCGCGAC...AGCGGCCGCCTGCGGGCTGCCCCGCTTTGCGGACGGGCTGTCCCCGCGCGAACG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS-3UTR TCA 90 bp TCCGTTCGCGCGGGGACAGCCCGTCCGCAAAGCGGGGCAGCCCGCAGGCGGCCGGTCGCGGTCACTCACTaGGCGCTCTTCGTGCGCAGC +
Preference number: 4 (lower is better)
Translates to: SVRAGTARPQSGAARRRPVAVTH*ALFVRS
Trigger: GCTGCGCACGAAGAGCGCTCAGTGAGTGACCGCGAC...CGGCCGCCTGCGGGCTGCCCCGCTTTGCGGACGGGCTGTCCCCGCGCGAACGGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS-3UTR TCA 90 bp CGTTCGCGCGGGGACAGCCCGTCCGCAAAGCGGGGCAGCCCGCAGGCGGCCGCTCGGTGCGAGCGAAGCTaGGCGCACGTCCTTCTTCTC +
Preference number: 4 (lower is better)
Translates to: RSRGDSPSAKRGSPQAAARCERS*AHVLLL
Trigger: GAGAAGAAGGACGTGCGCTCAGCTTCGCTCGCACCG...AGCGGCCGCCTGCGGGCTGCCCCGCTTTGCGGACGGGCTGTCCCCGCGCGAACG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS-3UTR TCA 90 bp CGTTCGCGCGGGGACAGCCCGTCCGCAAAGCGGGGCAGCCCGCAGGCGGCCGCTATCTCGGGCACTGTCTaGGGCTCCTCCTTCAGGGCC +
Preference number: 4 (lower is better)
Translates to: RSRGDSPSAKRGSPQAAAISGTV*GSSFRA
Trigger: GGCCCTGAAGGAGGAGCCTCAGACAGTGCCCGAGAT...AGCGGCCGCCTGCGGGCTGCCCCGCTTTGCGGACGGGCTGTCCCCGCGCGAACG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS-3UTR GCA 90 bp CGTTCGCGCGGGGACAGCCCGTCCGCAAAGCGGGGCAGCCCGCAGGCGGCCGCTGCGCGTGGGTACCGCTaGTTTCCGCCGCTGTCAACA +
Preference number: 4 (lower is better)
Translates to: RSRGDSPSAKRGSPQAAAARGYR*FPPLST
Trigger: TGTTGACAGCGGCGGAAAGCAGCGGTACCCACGCGC...AGCGGCCGCCTGCGGGCTGCCCCGCTTTGCGGACGGGCTGTCCCCGCGCGAACG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS-3UTR CCA 90 bp TCCGTTCGCGCGGGGACAGCCCGTCCGCAAAGCGGGGCAGCCCGCAGGCGGCCGCTTCAGGCTCCCCACTaGGTCGGCCAGGTTCAGGGT +
Preference number: 4 (lower is better)
Translates to: SVRAGTARPQSGAARRRPLQAPH*VGQVQG
Trigger: ACCCTGAACCTGGCCGACCCAGTGGGGAGCCTGAAG...CGGCCGCCTGCGGGCTGCCCCGCTTTGCGGACGGGCTGTCCCCGCGCGAACGGA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS-3UTR CCA 90 bp CGTTCGCGCGGGGACAGCCCGTCCGCAAAGCGGGGCAGCCCGCAGGCGGCCGCTGGAGGTCCGAGTTCTTaGCGCGGAGGTGCGGCTTCA +
Preference number: 4 (lower is better)
Translates to: RSRGDSPSAKRGSPQAAAGGPSS*RGGAAS
Trigger: TGAAGCCGCACCTCCGCGCCAAGAACTCGGACCTCC...AGCGGCCGCCTGCGGGCTGCCCCGCTTTGCGGACGGGCTGTCCCCGCGCGAACG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS-3UTR CCA 90 bp CGTTCGCGCGGGGACAGCCCGTCCGCAAAGCGGGGCAGCCCGCAGGCGGCCGCTCCTTCTTCTCTTGCGTaGCTCTCCGCCGCCTTCTGG +
Preference number: 4 (lower is better)
Translates to: RSRGDSPSAKRGSPQAAAPSSLA*LSAAFW
Trigger: CCAGAAGGCGGCGGAGAGCCACGCAAGAGAAGAAGG...AGCGGCCGCCTGCGGGCTGCCCCGCTTTGCGGACGGGCTGTCCCCGCGCGAACG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS-3UTR GCA 90 bp TCCGTTCGCGCGGGGACAGCCCGTCCGCAAAGCGGGGCAGCCCGCAGGCGGCCGGGGAAAGTTCTTTGCTaGTGCAGCCGCTCGCCGACT +
Preference number: 4 (lower is better)
Translates to: SVRAGTARPQSGAARRRPGKVLC*CSRSPT
Trigger: AGTCGGCGAGCGGCTGCAGCAGCAAAGAACTTTCCC...CGGCCGCCTGCGGGCTGCCCCGCTTTGCGGACGGGCTGTCCCCGCGCGAACGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS-3UTR GCA 90 bp TCCGTTCGCGCGGGGACAGCCCGTCCGCAAAGCGGGGCAGCCCGCAGGCGGCCGACGTCCTTCTTCTCTTaGGTGGCTCTCCGCCGCCTT +
Preference number: 4 (lower is better)
Translates to: SVRAGTARPQSGAARRRPTSFFS*VALRRL
Trigger: AAGGCGGCGGAGAGCCACGCAAGAGAAGAAGGACGT...CGGCCGCCTGCGGGCTGCCCCGCTTTGCGGACGGGCTGTCCCCGCGCGAACGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS-3UTR GCA 90 bp TCCGTTCGCGCGGGGACAGCCCGTCCGCAAAGCGGGGCAGCCCGCAGGCGGCCGGAAGTTGCTGAGGTTTaGGTAGACCGGCGGCTCGCT +
Preference number: 4 (lower is better)
Translates to: SVRAGTARPQSGAARRRPEVAEV*VDRRLA
Trigger: AGCGAGCCGCCGGTCTACGCAAACCTCAGCAACTTC...CGGCCGCCTGCGGGCTGCCCCGCTTTGCGGACGGGCTGTCCCCGCGCGAACGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS-3UTR CCA 90 bp TCCGTTCGCGCGGGGACAGCCCGTCCGCAAAGCGGGGCAGCCCGCAGGCGGCCGCATCTGTCACGTTCTTaGGGCACAGGAACTGGGTGG +
Preference number: 4 (lower is better)
Translates to: SVRAGTARPQSGAARRRPHLSRS*GTGTGW
Trigger: CCACCCAGTTCCTGTGCCCCAAGAACGTGACAGATG...CGGCCGCCTGCGGGCTGCCCCGCTTTGCGGACGGGCTGTCCCCGCGCGAACGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS-3UTR CCA 90 bp CGTTCGCGCGGGGACAGCCCGTCCGCAAAGCGGGGCAGCCCGCAGGCGGCCGCTTCCTTTTTCGGCACTTaGAGGCAGCGATGCGGTTCC +
Preference number: 4 (lower is better)
Translates to: RSRGDSPSAKRGSPQAAASFFGT*RQRCGS
Trigger: GGAACCGCATCGCTGCCTCCAAGTGCCGAAAAAGGA...AGCGGCCGCCTGCGGGCTGCCCCGCTTTGCGGACGGGCTGTCCCCGCGCGAACG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS-3UTR TCA 90 bp TCCGTTCGCGCGGGGACAGCCCGTCCGCAAAGCGGGGCAGCCCGCAGGCGGCCGGCCAGCTCCGAGTTCTaGGCTTTCAAGGTTTTCACT +
Preference number: 4 (lower is better)
Translates to: SVRAGTARPQSGAARRRPASSEF*AFKVFT
Trigger: AGTGAAAACCTTGAAAGCTCAGAACTCGGAGCTGGC...CGGCCGCCTGCGGGCTGCCCCGCTTTGCGGACGGGCTGTCCCCGCGCGAACGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS-3UTR TCA 90 bp CGTTCGCGCGGGGACAGCCCGTCCGCAAAGCGGGGCAGCCCGCAGGCGGCCGCTGCCAGCTCCGAGTTCTaGGCTTTCAAGGTTTTCACT +
Preference number: 4 (lower is better)
Translates to: RSRGDSPSAKRGSPQAAAASSEF*AFKVFT
Trigger: AGTGAAAACCTTGAAAGCTCAGAACTCGGAGCTGGC...AGCGGCCGCCTGCGGGCTGCCCCGCTTTGCGGACGGGCTGTCCCCGCGCGAACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS-3UTR GCA 90 bp AAGTCCTTCCCACTCGTGCACACTGGGGGCGCCGTCAGGACGCAACCCAGTCCAGGGAGCCACCATGCCTaGCCCGTTGACCGGCTGCGC +
Preference number: 4 (lower is better)
Translates to: KSFPLVHTGGAVRTQPSPGSHHA*PVDRLR
Trigger: GCGCAGCCGGTCAACGGGGCAGGCATGGTGGCTCCC...TGGACTGGGTTGCGTCCTGACGGCGCCCCCAGTGTGCACGAGTGGGAAGGACTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS-3UTR GCA 90 bp CCACTCGTGCACACTGGGGGCGCCGTCAGGACGCAACCCAGTCCAACTTGGATAAGCCGCCGCTGCCGCTaGCCCCTGCCACCGAGGCTA +
Preference number: 4 (lower is better)
Translates to: PLVHTGGAVRTQPSPTWISRRCR*PLPPRL
Trigger: TAGCCTCGGTGGCAGGGGGCAGCGGCAGCGGCGGCT...TATCCAAGTTGGACTGGGTTGCGTCCTGACGGCGCCCCCAGTGTGCACGAGTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS-3UTR GCA 90 bp AAGTCCTTCCCACTCGTGCACACTGGGGGCGCCGTCAGGACGCAACCCAGTCCAACCGGCGGCTCGCTGTaGAGGCTGGCGCTGAAGCCG +
Preference number: 4 (lower is better)
Translates to: KSFPLVHTGGAVRTQPSPTGGSL*RLALKP
Trigger: CGGCTTCAGCGCCAGCCTGCACAGCGAGCCGCCGGT...TGGACTGGGTTGCGTCCTGACGGCGCCCCCAGTGTGCACGAGTGGGAAGGACTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS-3UTR CCA 90 bp AAGTCCTTCCCACTCGTGCACACTGGGGGCGCCGTCAGGACGCAACCCAGTCCAGCCGCAACAGGGCTGTaGCAAGCGGGGGACACCCGC +
Preference number: 4 (lower is better)
Translates to: KSFPLVHTGGAVRTQPSPAATGL*QAGDTR
Trigger: GCGGGTGTCCCCCGCTTGCCACAGCCCTGTTGCGGC...TGGACTGGGTTGCGTCCTGACGGCGCCCCCAGTGTGCACGAGTGGGAAGGACTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS-3UTR CCA 90 bp CGTTCGCGCGGGGACAGCCCGTCCGCAAAGCGGGGCAGCCCGCAGGCGGCCGCTTGCGTTAGCATGAGTTaGCACCCACTGTTAACGTGG +
Preference number: 4 (lower is better)
Translates to: RSRGDSPSAKRGSPQAAACVSMS*HPLLTW
Trigger: CCACGTTAACAGTGGGTGCCAACTCATGCTAACGCA...AGCGGCCGCCTGCGGGCTGCCCCGCTTTGCGGACGGGCTGTCCCCGCGCGAACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS-3UTR CCA 90 bp CCACTCGTGCACACTGGGGGCGCCGTCAGGACGCAACCCAGTCCAACTTGGATACAGGCGGCCGCTCCCTaGCTCCACGCCAAGGGAGGG +
Preference number: 4 (lower is better)
Translates to: PLVHTGGAVRTQPSPTWIQAAAP*LHAKGG
Trigger: CCCTCCCTTGGCGTGGAGCCAGGGAGCGGCCGCCTG...TATCCAAGTTGGACTGGGTTGCGTCCTGACGGCGCCCCCAGTGTGCACGAGTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS-3UTR GCA 90 bp CCACTCGTGCACACTGGGGGCGCCGTCAGGACGCAACCCAGTCCAACTTGGATACGCGGAGCGGATCAGTaGGGACCCTGCAGTGGCCGG +
Preference number: 4 (lower is better)
Translates to: PLVHTGGAVRTQPSPTWIRGADQ*GPCSGR
Trigger: CCGGCCACTGCAGGGTCCGCACTGATCCGCTCCGCG...TATCCAAGTTGGACTGGGTTGCGTCCTGACGGCGCCCCCAGTGTGCACGAGTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS-3UTR GCA 90 bp CCACTCGTGCACACTGGGGGCGCCGTCAGGACGCAACCCAGTCCAACTTGGATAACCGGCGGCTCGCTGTaGAGGCTGGCGCTGAAGCCG +
Preference number: 4 (lower is better)
Translates to: PLVHTGGAVRTQPSPTWITGGSL*RLALKP
Trigger: CGGCTTCAGCGCCAGCCTGCACAGCGAGCCGCCGGT...TATCCAAGTTGGACTGGGTTGCGTCCTGACGGCGCCCCCAGTGTGCACGAGTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS-3UTR GCA 90 bp AAGTCCTTCCCACTCGTGCACACTGGGGGCGCCGTCAGGACGCAACCCAGTCCAGGCGGCTGCTGCTGCTaGTGGGGTTGCGCGGGAAAG +
Preference number: 4 (lower is better)
Translates to: KSFPLVHTGGAVRTQPSPGGCCC*WGCAGK
Trigger: CTTTCCCGCGCAACCCCAGCAGCAGCAGCAGCCGCC...TGGACTGGGTTGCGTCCTGACGGCGCCCCCAGTGTGCACGAGTGGGAAGGACTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS-3UTR GCA 90 bp CCACTCGTGCACACTGGGGGCGCCGTCAGGACGCAACCCAGTCCAACTTGGATATGGTGCGGCGGCTGCTaGTGCTGCTGGGGTTGCGCG +
Preference number: 4 (lower is better)
Translates to: PLVHTGGAVRTQPSPTWIWCGGC*CCWGCA
Trigger: CGCGCAACCCCAGCAGCAGCAGCAGCCGCCGCACCA...TATCCAAGTTGGACTGGGTTGCGTCCTGACGGCGCCCCCAGTGTGCACGAGTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS-3UTR TCA 90 bp AAGTCCTTCCCACTCGTGCACACTGGGGGCGCCGTCAGGACGCAACCCAGTCCAGGGTCGGCGTGGTGGTaGTGTGCCCGTTGCTGGACT +
Preference number: 4 (lower is better)
Translates to: KSFPLVHTGGAVRTQPSPGSAWW*CARCWT
Trigger: AGTCCAGCAACGGGCACATCACCACCACGCCGACCC...TGGACTGGGTTGCGTCCTGACGGCGCCCCCAGTGTGCACGAGTGGGAAGGACTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS-3UTR TCA 90 bp TCAATGTTAACGAAAAGTCCAACGTTCCGTTCGCGCGGGGACAGCCCGTCCGCACCATGCCTGCCCCGTTaGCCGGCTGCGCCGCCGACG +
Preference number: 4 (lower is better)
Translates to: SMLTKSPTFRSRGDSPSAPCLPR*PAAPPT
Trigger: CGTCGGCGGCGCAGCCGGTCAACGGGGCAGGCATGG...TGCGGACGGGCTGTCCCCGCGCGAACGGAACGTTGGACTTTTCGTTAACATTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS-3UTR GCA 90 bp AAGAGTTCATCTGTAGGCTCAGCCTCGCTCTCACAAACCTCCCTCCTGCCGCCCGGCTGTCGTCCCCGCTaGGCCCTCCTCACCAGCTCG +
Preference number: 4 (lower is better)
Translates to: KSSSVGSASLSQTSLLPPGCRPR*ALLTSS
Trigger: CGAGCTGGTGAGGAGGGCGCAGCGGGGACGACAGCC...GGGCGGCAGGAGGGAGGTTTGTGAGAGCGAGGCTGAGCCTACAGATGAACTCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS-3UTR CCA 90 bp AAGTCCTTCCCACTCGTGCACACTGGGGGCGCCGTCAGGACGCAACCCAGTCCACTTCAGGCTCCCCACTaGGTCGGCCAGGTTCAGGGT +
Preference number: 4 (lower is better)
Translates to: KSFPLVHTGGAVRTQPSPLQAPH*VGQVQG
Trigger: ACCCTGAACCTGGCCGACCCAGTGGGGAGCCTGAAG...TGGACTGGGTTGCGTCCTGACGGCGCCCCCAGTGTGCACGAGTGGGAAGGACTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS-3UTR CCA 90 bp AAGTCCTTCCCACTCGTGCACACTGGGGGCGCCGTCAGGACGCAACCCAGTCCACTGGGCAGCGTGTTCTaGCTGTGCAGTTCGGCCAGG +
Preference number: 4 (lower is better)
Translates to: KSFPLVHTGGAVRTQPSPLGSVF*LCSSAR
Trigger: CCTGGCCGAACTGCACAGCCAGAACACGCTGCCCAG...TGGACTGGGTTGCGTCCTGACGGCGCCCCCAGTGTGCACGAGTGGGAAGGACTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS-3UTR GCA 90 bp CCACTCGTGCACACTGGGGGCGCCGTCAGGACGCAACCCAGTCCAACTTGGATACCACTCCCGCCTCGCTaGTTCAGCCACACTCAGTGC +
Preference number: 4 (lower is better)
Translates to: PLVHTGGAVRTQPSPTWIPLPPR*FSHTQC
Trigger: GCACTGAGTGTGGCTGAAGCAGCGAGGCGGGAGTGG...TATCCAAGTTGGACTGGGTTGCGTCCTGACGGCGCCCCCAGTGTGCACGAGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS-3UTR GCA 90 bp AAGTCCTTCCCACTCGTGCACACTGGGGGCGCCGTCAGGACGCAACCCAGTCCACTGTGTCTGTCTGTCTaGCTGACTCCGCGCACCTCC +
Preference number: 4 (lower is better)
Translates to: KSFPLVHTGGAVRTQPSPLCLSV*LTPRTS
Trigger: GGAGGTGCGCGGAGTCAGGCAGACAGACAGACACAG...TGGACTGGGTTGCGTCCTGACGGCGCCCCCAGTGTGCACGAGTGGGAAGGACTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS-3UTR GCA 90 bp AAGTCCTTCCCACTCGTGCACACTGGGGGCGCCGTCAGGACGCAACCCAGTCCATTGGCTCCGGGACTCTaGCACTTGTCTCCGGTCCTC +
Preference number: 4 (lower is better)
Translates to: KSFPLVHTGGAVRTQPSPLAPGL*HLSPVL
Trigger: GAGGACCGGAGACAAGTGGCAGAGTCCCGGAGCCAA...TGGACTGGGTTGCGTCCTGACGGCGCCCCCAGTGTGCACGAGTGGGAAGGACTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS-3UTR GCA 90 bp AAGTCCTTCCCACTCGTGCACACTGGGGGCGCCGTCAGGACGCAACCCAGTCCAACTGAGCGCTCTTCGTaGGCAGCGGTTCCTCGGAGT +
Preference number: 4 (lower is better)
Translates to: KSFPLVHTGGAVRTQPSPTERSS*AAVPRS
Trigger: ACTCCGAGGAACCGCTGCGCACGAAGAGCGCTCAGT...TGGACTGGGTTGCGTCCTGACGGCGCCCCCAGTGTGCACGAGTGGGAAGGACTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS-3UTR GCA 90 bp CCACTCGTGCACACTGGGGGCGCCGTCAGGACGCAACCCAGTCCAACTTGGATATTCTTGGCGCGGAGGTaGGGCTTCAGGCTCCCCACT +
Preference number: 4 (lower is better)
Translates to: PLVHTGGAVRTQPSPTWIFLARR*GFRLPT
Trigger: AGTGGGGAGCCTGAAGCCGCACCTCCGCGCCAAGAA...TATCCAAGTTGGACTGGGTTGCGTCCTGACGGCGCCCCCAGTGTGCACGAGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS-3UTR GCA 90 bp TCCGTTCGCGCGGGGACAGCCCGTCCGCAAAGCGGGGCAGCCCGCAGGCGGCCGCATCCTCCAAACTGTTaGCAGCATGAATCATTCTTA +
Preference number: 4 (lower is better)
Translates to: SVRAGTARPQSGAARRRPHPPNC*QHESFL
Trigger: TAAGAATGATTCATGCTGGCAACAGTTTGGAGGATG...CGGCCGCCTGCGGGCTGCCCCGCTTTGCGGACGGGCTGTCCCCGCGCGAACGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678696.1
CDS-3UTR CCA 90 bp CCACTCGTGCACACTGGGGGCGCCGTCAGGACGCAACCCAGTCCAACTTGGATAGCCGACCTGGCTGGCTaGCTGTGTCTGTCTGTCTGC +
Preference number: 4 (lower is better)
Translates to: PLVHTGGAVRTQPSPTWIADLAG*LCLSVC
Trigger: GCAGACAGACAGACACAGCCAGCCAGCCAGGTCGGC...TATCCAAGTTGGACTGGGTTGCGTCCTGACGGCGCCCCCAGTGTGCACGAGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS-3UTR CCA 90 bp TCAATGTTAACGAAAAGTCCAACGTTCCGTTCGCGCGGGGACAGCCCGTCCGCACCTCCCGGGGGCGGCTaGAGACCAGGCTCTCTGGAC +
Preference number: 4 (lower is better)
Translates to: SMLTKSPTFRSRGDSPSAPPGGG*RPGSLD
Trigger: GTCCAGAGAGCCTGGTCTCCAGCCGCCCCCGGGAGG...TGCGGACGGGCTGTCCCCGCGCGAACGGAACGTTGGACTTTTCGTTAACATTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS-3UTR GCA 90 bp CCACTCGTGCACACTGGGGGCGCCGTCAGGACGCAACCCAGTCCAACTTGGATATTGGCTCCGGGACTCTaGCACTTGTCTCCGGTCCTC +
Preference number: 4 (lower is better)
Translates to: PLVHTGGAVRTQPSPTWILAPGL*HLSPVL
Trigger: GAGGACCGGAGACAAGTGGCAGAGTCCCGGAGCCAA...TATCCAAGTTGGACTGGGTTGCGTCCTGACGGCGCCCCCAGTGTGCACGAGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS-3UTR GCA 90 bp AAGTCCTTCCCACTCGTGCACACTGGGGGCGCCGTCAGGACGCAACCCAGTCCAGGCGTGGTGGTGATGTaGCCGTTGCTGGACTGGATT +
Preference number: 4 (lower is better)
Translates to: KSFPLVHTGGAVRTQPSPGVVVM*PLLDWI
Trigger: AATCCAGTCCAGCAACGGGCACATCACCACCACGCC...TGGACTGGGTTGCGTCCTGACGGCGCCCCCAGTGTGCACGAGTGGGAAGGACTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS-3UTR CCA 90 bp AAGTCCTTCCCACTCGTGCACACTGGGGGCGCCGTCAGGACGCAACCCAGTCCATGCCCGTTGCTGGACTaGATTATCAGGCGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: KSFPLVHTGGAVRTQPSPCPLLD*IIRRSS
Trigger: GCTGGAGCGCCTGATAATCCAGTCCAGCAACGGGCA...TGGACTGGGTTGCGTCCTGACGGCGCCCCCAGTGTGCACGAGTGGGAAGGACTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS-3UTR CCA 90 bp TCAATGTTAACGAAAAGTCCAACGTTCCGTTCGCGCGGGGACAGCCCGTCCGCACCCACTCGTGCACACTaGGGGCGCCGTCAGGACGCA +
Preference number: 4 (lower is better)
Translates to: SMLTKSPTFRSRGDSPSAPTRAH*GRRQDA
Trigger: TGCGTCCTGACGGCGCCCCCAGTGTGCACGAGTGGG...TGCGGACGGGCTGTCCCCGCGCGAACGGAACGTTGGACTTTTCGTTAACATTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS-3UTR GCA 90 bp CCACTCGTGCACACTGGGGGCGCCGTCAGGACGCAACCCAGTCCAACTTGGATAGAGGTTAGTTTGGGCTaGGCGCACAAGTTTCGGGGC +
Preference number: 4 (lower is better)
Translates to: PLVHTGGAVRTQPSPTWIEVSLG*AHKFRG
Trigger: GCCCCGAAACTTGTGCGCGCAGCCCAAACTAACCTC...TATCCAAGTTGGACTGGGTTGCGTCCTGACGGCGCCCCCAGTGTGCACGAGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS-3UTR GCA 90 bp TCAATGTTAACGAAAAGTCCAACGTTCCGTTCGCGCGGGGACAGCCCGTCCGCAAGCGTGTTCTGGCTGTaGAGTTCGGCCAGGGCGCGC +
Preference number: 4 (lower is better)
Translates to: SMLTKSPTFRSRGDSPSASVFWL*SSARAR
Trigger: GCGCGCCCTGGCCGAACTGCACAGCCAGAACACGCT...TGCGGACGGGCTGTCCCCGCGCGAACGGAACGTTGGACTTTTCGTTAACATTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS-3UTR GCA 90 bp AAGAGTTCATCTGTAGGCTCAGCCTCGCTCTCACAAACCTCCCTCCTGCCGCCCAGTCCTTCCCACTCGTaGACACTGGGGGCGCCGTCA +
Preference number: 4 (lower is better)
Translates to: KSSSVGSASLSQTSLLPPSPSHS*TLGAPS
Trigger: TGACGGCGCCCCCAGTGTGCACGAGTGGGAAGGACT...GGGCGGCAGGAGGGAGGTTTGTGAGAGCGAGGCTGAGCCTACAGATGAACTCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS-3UTR GCA 90 bp CGTTCGCGCGGGGACAGCCCGTCCGCAAAGCGGGGCAGCCCGCAGGCGGCCGCTATGGTAAACTCAGAGTaGTCCAAATCTCTTATTTAC +
Preference number: 4 (lower is better)
Translates to: RSRGDSPSAKRGSPQAAAMVNSE*SKSLIY
Trigger: GTAAATAAGAGATTTGGAGCACTCTGAGTTTACCAT...AGCGGCCGCCTGCGGGCTGCCCCGCTTTGCGGACGGGCTGTCCCCGCGCGAACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371222.4
CDS-3UTR CCA 90 bp TCAATGTTAACGAAAAGTCCAACGTTCCGTTCGCGCGGGGACAGCCCGTCCGCATTGGGGCACAGGAACTaGGTGGGGGTCGGCGTGGTG +
Preference number: 4 (lower is better)
Translates to: SMLTKSPTFRSRGDSPSALGHRN*VGVGVV
Trigger: CACCACGCCGACCCCCACCCAGTTCCTGTGCCCCAA...TGCGGACGGGCTGTCCCCGCGCGAACGGAACGTTGGACTTTTCGTTAACATTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS-3UTR CCA 90 bp CCACTCGTGCACACTGGGGGCGCCGTCAGGACGCAACCCAGTCCAACTTGGATAGCTGCTCAGCGCGCCTaGGTTGAAGTTGCTGAGGTT +
Preference number: 4 (lower is better)
Translates to: PLVHTGGAVRTQPSPTWIAAQRA*VEVAEV
Trigger: AACCTCAGCAACTTCAACCCAGGCGCGCTGAGCAGC...TATCCAAGTTGGACTGGGTTGCGTCCTGACGGCGCCCCCAGTGTGCACGAGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS-3UTR TCA 90 bp CCATCACGAGTTATGCACACAGTTAACGAAGGCAGGCCAGAAAGAGTTCATCTGCGGGCGACGCCAGCTTaGGCAGCCCCACGTCGGGCG +
Preference number: 4 (lower is better)
Translates to: PSRVMHTVNEGRPERVHLRATPA*AAPRRA
Trigger: CGCCCGACGTGGGGCTGCTCAAGCTGGCGTCGCCCG...CAGATGAACTCTTTCTGGCCTGCCTTCGTTAACTGTGTGCATAACTCGTGATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678696.1
CDS-3UTR GCA 90 bp TCAATGTTAACGAAAAGTCCAACGTTCCGTTCGCGCGGGGACAGCCCGTCCGCAGCCGGGAAAGTTCTTTaGTGCTGCAGCCGCTCGCCG +
Preference number: 4 (lower is better)
Translates to: SMLTKSPTFRSRGDSPSAAGKVL*CCSRSP
Trigger: CGGCGAGCGGCTGCAGCAGCAAAGAACTTTCCCGGC...TGCGGACGGGCTGTCCCCGCGCGAACGGAACGTTGGACTTTTCGTTAACATTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS-3UTR TCA 90 bp AAGAGTTCATCTGTAGGCTCAGCCTCGCTCTCACAAACCTCCCTCCTGCCGCCCGGAGGAACGAGGCGTTaGGGGCATCGTCATAGAAGG +
Preference number: 4 (lower is better)
Translates to: KSSSVGSASLSQTSLLPPGGTRR*GHRHRR
Trigger: CCTTCTATGACGATGCCCTCAACGCCTCGTTCCTCC...GGGCGGCAGGAGGGAGGTTTGTGAGAGCGAGGCTGAGCCTACAGATGAACTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS-3UTR GCA 90 bp AAGAGTTCATCTGTAGGCTCAGCCTCGCTCTCACAAACCTCCCTCCTGCCGCCCGGCGTGGTGGTGATGTaGCCGTTGCTGGACTGGATT +
Preference number: 4 (lower is better)
Translates to: KSSSVGSASLSQTSLLPPGVVVM*PLLDWI
Trigger: AATCCAGTCCAGCAACGGGCACATCACCACCACGCC...GGGCGGCAGGAGGGAGGTTTGTGAGAGCGAGGCTGAGCCTACAGATGAACTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS-3UTR CCA 90 bp CCACTCGTGCACACTGGGGGCGCCGTCAGGACGCAACCCAGTCCAACTTGGATAAAGGCTTGCAAAAGTTaGCTCCGGGACTCTGCCACT +
Preference number: 4 (lower is better)
Translates to: PLVHTGGAVRTQPSPTWIKACKS*LRDSAT
Trigger: AGTGGCAGAGTCCCGGAGCCAACTTTTGCAAGCCTT...TATCCAAGTTGGACTGGGTTGCGTCCTGACGGCGCCCCCAGTGTGCACGAGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS-3UTR CCA 90 bp CATGAGGGAAGGCATCCTGTTGCTTTCACTCTTCTGTGTTCCTGGTTTCTAGCTAGCGCACGCACCCGCTaGCTGTCGTCCCCGCTGCGC +
Preference number: 4 (lower is better)
Translates to: HEGRHPVAFTLLCSWFLASARTR*LSSPLR
Trigger: GCGCAGCGGGGACGACAGCCAGCGGGTGCGTGCGCT...AGCTAGAAACCAGGAACACAGAAGAGTGAAAGCAACAGGATGCCTTCCCTCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678696.1
CDS-3UTR CCA 90 bp CCACTCGTGCACACTGGGGGCGCCGTCAGGACGCAACCCAGTCCAACTTGGATACACGTGAGGTTAGTTTaGGCTGCGCGCACAAGTTTC +
Preference number: 4 (lower is better)
Translates to: PLVHTGGAVRTQPSPTWIHVRLV*AARTSF
Trigger: GAAACTTGTGCGCGCAGCCCAAACTAACCTCACGTG...TATCCAAGTTGGACTGGGTTGCGTCCTGACGGCGCCCCCAGTGTGCACGAGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS-3UTR CCA 90 bp TTAACGAAGGCAGGCCAGAAAGAGTTCATCTGTAGGCTCAGCCTCGCTCTCACAGGCTGCTGCTGCTGCTaGGGTTGCGCGGGAAAGGCC +
Preference number: 4 (lower is better)
Translates to: LTKAGQKEFICRLSLALTGCCCC*GCAGKA
Trigger: GGCCTTTCCCGCGCAACCCCAGCAGCAGCAGCAGCC...TGTGAGAGCGAGGCTGAGCCTACAGATGAACTCTTTCTGGCCTGCCTTCGTTAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS-3UTR CCA 90 bp TTAACGAAGGCAGGCCAGAAAGAGTTCATCTGTAGGCTCAGCCTCGCTCTCACAATCTGCTGGGGCAGGTaGTGCGGCGGCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: LTKAGQKEFICRLSLALTICWGR*CGGCCC
Trigger: GCAGCAGCAGCCGCCGCACCACCTGCCCCAGCAGAT...TGTGAGAGCGAGGCTGAGCCTACAGATGAACTCTTTCTGGCCTGCCTTCGTTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS-3UTR CCA 90 bp TTAACGAAGGCAGGCCAGAAAGAGTTCATCTGTAGGCTCAGCCTCGCTCTCACACCCACTCGTGCACACTaGGGGCGCCGTCAGGACGCA +
Preference number: 4 (lower is better)
Translates to: LTKAGQKEFICRLSLALTPTRAH*GRRQDA
Trigger: TGCGTCCTGACGGCGCCCCCAGTGTGCACGAGTGGG...TGTGAGAGCGAGGCTGAGCCTACAGATGAACTCTTTCTGGCCTGCCTTCGTTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS-3UTR GCA 90 bp CATCACGAGTTATGCACACAGTTAACGAAGGCAGGCCAGAAAGAGTTCATCTGTGATCAGTGCGGACCCTaGAGTGGCCGGCCGGCGGCG +
Preference number: 4 (lower is better)
Translates to: HHELCTQLTKAGQKEFICDQCGP*SGRPAA
Trigger: CGCCGCCGGCCGGCCACTGCAGGGTCCGCACTGATC...ACAGATGAACTCTTTCTGGCCTGCCTTCGTTAACTGTGTGCATAACTCGTGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678696.1
CDS-3UTR GCA 90 bp TTATGCACACAGTTAACGAAGGCAGGCCAGAAAGAGTTCATCTGTAGGCTCAGCGGCTGTCGTCCCCGCTaGGCCCTCCTCACCAGCTCG +
Preference number: 4 (lower is better)
Translates to: LCTQLTKAGQKEFICRLSGCRPR*ALLTSS
Trigger: CGAGCTGGTGAGGAGGGCGCAGCGGGGACGACAGCC...GCTGAGCCTACAGATGAACTCTTTCTGGCCTGCCTTCGTTAACTGTGTGCATAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678696.1
CDS-3UTR GCA 90 bp TTAACGAAGGCAGGCCAGAAAGAGTTCATCTGTAGGCTCAGCCTCGCTCTCACAAGCGTGTTCTGGCTGTaGAGTTCGGCCAGGGCGCGC +
Preference number: 4 (lower is better)
Translates to: LTKAGQKEFICRLSLALTSVFWL*SSARAR
Trigger: GCGCGCCCTGGCCGAACTGCACAGCCAGAACACGCT...TGTGAGAGCGAGGCTGAGCCTACAGATGAACTCTTTCTGGCCTGCCTTCGTTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS-3UTR CCA 90 bp AAGAGTTCATCTGTAGGCTCAGCCTCGCTCTCACAAACCTCCCTCCTGCCGCCCTGGTCTTTACCGCCGTaGAGAAGCCTAAGACGCAGG +
Preference number: 4 (lower is better)
Translates to: KSSSVGSASLSQTSLLPPWSLPP*RSLRRR
Trigger: CCTGCGTCTTAGGCTTCTCCACGGCGGTAAAGACCA...GGGCGGCAGGAGGGAGGTTTGTGAGAGCGAGGCTGAGCCTACAGATGAACTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS-3UTR GCA 90 bp TCAATGTTAACGAAAAGTCCAACGTTCCGTTCGCGCGGGGACAGCCCGTCCGCAGACGCAGGAAAGGCTTaGAAAAGTTGGCTCCGGGAC +
Preference number: 4 (lower is better)
Translates to: SMLTKSPTFRSRGDSPSADAGKA*KSWLRD
Trigger: GTCCCGGAGCCAACTTTTGCAAGCCTTTCCTGCGTC...TGCGGACGGGCTGTCCCCGCGCGAACGGAACGTTGGACTTTTCGTTAACATTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS-3UTR GCA 90 bp TTAACGAAGGCAGGCCAGAAAGAGTTCATCTGTAGGCTCAGCCTCGCTCTCACATTCTTGGCGCGGAGGTaGGGCTTCAGGCTCCCCACT +
Preference number: 4 (lower is better)
Translates to: LTKAGQKEFICRLSLALTFLARR*GFRLPT
Trigger: AGTGGGGAGCCTGAAGCCGCACCTCCGCGCCAAGAA...TGTGAGAGCGAGGCTGAGCCTACAGATGAACTCTTTCTGGCCTGCCTTCGTTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS-3UTR GCA 90 bp CATCACGAGTTATGCACACAGTTAACGAAGGCAGGCCAGAAAGAGTTCATCTGTGGGAGCCACCATGCCTaGCCCGTTGACCGGCTGCGC +
Preference number: 4 (lower is better)
Translates to: HHELCTQLTKAGQKEFICGSHHA*PVDRLR
Trigger: GCGCAGCCGGTCAACGGGGCAGGCATGGTGGCTCCC...ACAGATGAACTCTTTCTGGCCTGCCTTCGTTAACTGTGTGCATAACTCGTGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678696.1
CDS-3UTR GCA 90 bp CCACTCGTGCACACTGGGGGCGCCGTCAGGACGCAACCCAGTCCAACTTGGATAGGGAAGGCATCCTGTTaGTTTCACTCTTCTGTGTTC +
Preference number: 4 (lower is better)
Translates to: PLVHTGGAVRTQPSPTWIGKASC*FHSSVF
Trigger: GAACACAGAAGAGTGAAAGCAACAGGATGCCTTCCC...TATCCAAGTTGGACTGGGTTGCGTCCTGACGGCGCCCCCAGTGTGCACGAGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000678696.1
CDS-3UTR CCA 90 bp CATCACGAGTTATGCACACAGTTAACGAAGGCAGGCCAGAAAGAGTTCATCTGTGCCGCAACAGGGCTGTaGCAAGCGGGGGACACCCGC +
Preference number: 4 (lower is better)
Translates to: HHELCTQLTKAGQKEFICAATGL*QAGDTR
Trigger: GCGGGTGTCCCCCGCTTGCCACAGCCCTGTTGCGGC...ACAGATGAACTCTTTCTGGCCTGCCTTCGTTAACTGTGTGCATAACTCGTGATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000678696.1
CDS-3UTR CCA 90 bp GTACATACACAGTTAACGAAGGCAGGCCAGAAAGAGTTCATCTGTAGGCTCAGCATCTGCTGGGGCAGGTaGTGCGGCGGCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: VHTQLTKAGQKEFICRLSICWGR*CGGCCC
Trigger: GCAGCAGCAGCCGCCGCACCACCTGCCCCAGCAGAT...GCTGAGCCTACAGATGAACTCTTTCTGGCCTGCCTTCGTTAACTGTGTATGTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371222.4
CDS-3UTR CCA 90 bp TTAACGAAGGCAGGCCAGAAAGAGTTCATCTGTAGGCTCAGCCTCGCTCTCACAGGGACTCCATGTCGATaGGGGACAGGGGCGGTGTCT +
Preference number: 4 (lower is better)
Translates to: LTKAGQKEFICRLSLALTGTPCR*GTGAVS
Trigger: AGACACCGCCCCTGTCCCCCATCGACATGGAGTCCC...TGTGAGAGCGAGGCTGAGCCTACAGATGAACTCTTTCTGGCCTGCCTTCGTTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS-3UTR CCA 90 bp AAGTCCTTCCCACTCGTGCACACTGGGGGCGCCGTCAGGACGCAACCCAGTCCACAACCCAGTCCAACTTaGATACCCTTGGCTTTAGTT +
Preference number: 4 (lower is better)
Translates to: KSFPLVHTGGAVRTQPSPQPSPT*IPLALV
Trigger: AACTAAAGCCAAGGGTATCCAAGTTGGACTGGGTTG...TGGACTGGGTTGCGTCCTGACGGCGCCCCCAGTGTGCACGAGTGGGAAGGACTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS-3UTR TCA 90 bp GTACATACACAGTTAACGAAGGCAGGCCAGAAAGAGTTCATCTGTAGGCTCAGCCCACGTCGGGCGAGGTaGGGAGGTCCGAGTTCTTGG +
Preference number: 4 (lower is better)
Translates to: VHTQLTKAGQKEFICRLSPRRAR*GGPSSW
Trigger: CCAAGAACTCGGACCTCCTCACCTCGCCCGACGTGG...GCTGAGCCTACAGATGAACTCTTTCTGGCCTGCCTTCGTTAACTGTGTATGTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371222.4
CDS-3UTR TCA 90 bp AAGAGTTCATCTGTAGGCTCAGCCTCGCTCTCACAAACCTCCCTCCTGCCGCCCCTTCCTCCAGCCTCCTaGAACATCGCACTATCCTTT +
Preference number: 4 (lower is better)
Translates to: KSSSVGSASLSQTSLLPPLPPAS*NIALSF
Trigger: AAAGGATAGTGCGATGTTTCAGGAGGCTGGAGGAAG...GGGCGGCAGGAGGGAGGTTTGTGAGAGCGAGGCTGAGCCTACAGATGAACTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371222.4
CDS-3UTR GCA 90 bp TTAACGAAGGCAGGCCAGAAAGAGTTCATCTGTAGGCTCAGCCTCGCTCTCACACTGTGTCTGTCTGTCTaGCTGACTCCGCGCACCTCC +
Preference number: 4 (lower is better)
Translates to: LTKAGQKEFICRLSLALTLCLSV*LTPRTS
Trigger: GGAGGTGCGCGGAGTCAGGCAGACAGACAGACACAG...TGTGAGAGCGAGGCTGAGCCTACAGATGAACTCTTTCTGGCCTGCCTTCGTTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS-3UTR GCA 90 bp CCACTCGTGCACACTGGGGGCGCCGTCAGGACGCAACCCAGTCCAACTTGGATAGGTCGTTTCCATCTTTaGAGTCATAGAACAGTCCGT +
Preference number: 4 (lower is better)
Translates to: PLVHTGGAVRTQPSPTWIGRFHL*SHRTVR
Trigger: ACGGACTGTTCTATGACTGCAAAGATGGAAACGACC...TATCCAAGTTGGACTGGGTTGCGTCCTGACGGCGCCCCCAGTGTGCACGAGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS-3UTR GCA 90 bp TATTATGTCCCCACTCTGTTTCAAATTCACCTGCTTTCTCCGTCACCTGCATTAAGCCGCCGCTGCCGCTaGCCCCTGCCACCGAGGCTA +
Preference number: 4 (lower is better)
Translates to: YYVPTLFQIHLLSPSPALSRRCR*PLPPRL
Trigger: TAGCCTCGGTGGCAGGGGGCAGCGGCAGCGGCGGCT...TAATGCAGGTGACGGAGAAAGCAGGTGAATTTGAAACAGAGTGGGGACATAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678696.1
CDS-3UTR CCA 90 bp TTAACGAAGGCAGGCCAGAAAGAGTTCATCTGTAGGCTCAGCCTCGCTCTCACACCTTCTTCTCTTGCGTaGCTCTCCGCCGCCTTCTGG +
Preference number: 4 (lower is better)
Translates to: LTKAGQKEFICRLSLALTPSSLA*LSAAFW
Trigger: CCAGAAGGCGGCGGAGAGCCACGCAAGAGAAGAAGG...TGTGAGAGCGAGGCTGAGCCTACAGATGAACTCTTTCTGGCCTGCCTTCGTTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS-3UTR CCA 90 bp AAGTCCTTCCCACTCGTGCACACTGGGGGCGCCGTCAGGACGCAACCCAGTCCATCTGTTTCAGGATCTTaGGGTTACTGTAGCCATAAG +
Preference number: 4 (lower is better)
Translates to: KSFPLVHTGGAVRTQPSPSVSGS*GYCSHK
Trigger: CTTATGGCTACAGTAACCCCAAGATCCTGAAACAGA...TGGACTGGGTTGCGTCCTGACGGCGCCCCCAGTGTGCACGAGTGGGAAGGACTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS-3UTR CCA 90 bp GGTATTATGTCCCCACTCTGTTTCAAATTCACCTGCTTTCTCCGTCACCTGCATGGCTGCTGCTGCTGCTaGGGTTGCGCGGGAAAGGCC +
Preference number: 4 (lower is better)
Translates to: GIMSPLCFKFTCFLRHLHGCCCC*GCAGKA
Trigger: GGCCTTTCCCGCGCAACCCCAGCAGCAGCAGCAGCC...ATGCAGGTGACGGAGAAAGCAGGTGAATTTGAAACAGAGTGGGGACATAATACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678696.1
CDS-3UTR TCA 90 bp CCATCACGAGTTATGCACACAGTTAACGAAGGCAGGCCAGAAAGAGTTCATCTGGCTTCCTCTCCGCCTTaGTCCGCTCCTGGGACTCCA +
Preference number: 4 (lower is better)
Translates to: PSRVMHTVNEGRPERVHLASSPP*SAPGTP
Trigger: TGGAGTCCCAGGAGCGGATCAAGGCGGAGAGGAAGC...CAGATGAACTCTTTCTGGCCTGCCTTCGTTAACTGTGTGCATAACTCGTGATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678696.1
CDS-3UTR TCA 90 bp GTACATACACAGTTAACGAAGGCAGGCCAGAAAGAGTTCATCTGTAGGCTCAGCGTGCCACCTGTTCCCTaGGCATGTTGGCCGTGGACG +
Preference number: 4 (lower is better)
Translates to: VHTQLTKAGQKEFICRLSVPPVP*ACWPWT
Trigger: CGTCCACGGCCAACATGCTCAGGGAACAGGTGGCAC...GCTGAGCCTACAGATGAACTCTTTCTGGCCTGCCTTCGTTAACTGTGTATGTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371222.4
CDS-3UTR TCA 90 bp TTATGCACACAGTTAACGAAGGCAGGCCAGAAAGAGTTCATCTGTAGGCTCAGCGTGCCACCTGTTCCCTaGGCATGTTGGCCGTGGACG +
Preference number: 4 (lower is better)
Translates to: LCTQLTKAGQKEFICRLSVPPVP*ACWPWT
Trigger: CGTCCACGGCCAACATGCTCAGGGAACAGGTGGCAC...GCTGAGCCTACAGATGAACTCTTTCTGGCCTGCCTTCGTTAACTGTGTGCATAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678696.1
CDS-3UTR GCA 90 bp AAGTCCTTCCCACTCGTGCACACTGGGGGCGCCGTCAGGACGCAACCCAGTCCAAATGGTCACAGCACATaGCACTTGATACAATCCAAA +
Preference number: 4 (lower is better)
Translates to: KSFPLVHTGGAVRTQPSPNGHST*HLIQSK
Trigger: TTTGGATTGTATCAAGTGGCATGTGCTGTGACCATT...TGGACTGGGTTGCGTCCTGACGGCGCCCCCAGTGTGCACGAGTGGGAAGGACTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371222.4
CDS-3UTR CCA 90 bp TTAACGAAGGCAGGCCAGAAAGAGTTCATCTGTAGGCTCAGCCTCGCTCTCACATGCCCGTTGCTGGACTaGATTATCAGGCGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: LTKAGQKEFICRLSLALTCPLLD*IIRRSS
Trigger: GCTGGAGCGCCTGATAATCCAGTCCAGCAACGGGCA...TGTGAGAGCGAGGCTGAGCCTACAGATGAACTCTTTCTGGCCTGCCTTCGTTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS-3UTR CCA 90 bp CCATCACGAGTTATGCACACAGTTAACGAAGGCAGGCCAGAAAGAGTTCATCTGGGGACTCCATGTCGATaGGGGACAGGGGCGGTGTCT +
Preference number: 4 (lower is better)
Translates to: PSRVMHTVNEGRPERVHLGTPCR*GTGAVS
Trigger: AGACACCGCCCCTGTCCCCCATCGACATGGAGTCCC...CAGATGAACTCTTTCTGGCCTGCCTTCGTTAACTGTGTGCATAACTCGTGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000678696.1
CDS-3UTR TCA 90 bp GGTATTATGTCCCCACTCTGTTTCAAATTCACCTGCTTTCTCCGTCACCTGCATCGGTGCGAGCGAAGCTaGGCGCACGTCCTTCTTCTC +
Preference number: 4 (lower is better)
Translates to: GIMSPLCFKFTCFLRHLHRCERS*AHVLLL
Trigger: GAGAAGAAGGACGTGCGCTCAGCTTCGCTCGCACCG...ATGCAGGTGACGGAGAAAGCAGGTGAATTTGAAACAGAGTGGGGACATAATACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678696.1
CDS-3UTR TCA 90 bp GGAAGGCATCCTGTTGCTTTCACTCTTCTGTGTTCCTGGTTTCTAGCTTCTTCTATCTCGGGCACTGTCTaGGGCTCCTCCTTCAGGGCC +
Preference number: 4 (lower is better)
Translates to: GRHPVAFTLLCSWFLASSISGTV*GSSFRA
Trigger: GGCCCTGAAGGAGGAGCCTCAGACAGTGCCCGAGAT...AGAAGAAGCTAGAAACCAGGAACACAGAAGAGTGAAAGCAACAGGATGCCTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678696.1
CDS-3UTR TCA 90 bp CCACTCGTGCACACTGGGGGCGCCGTCAGGACGCAACCCAGTCCAACTTGGATACCCTTTAATACTGAATaGGATCGAATGTTAGGTCCA +
Preference number: 4 (lower is better)
Translates to: PLVHTGGAVRTQPSPTWIPFNTE*DRMLGP
Trigger: TGGACCTAACATTCGATCTCATTCAGTATTAAAGGG...TATCCAAGTTGGACTGGGTTGCGTCCTGACGGCGCCCCCAGTGTGCACGAGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS-3UTR GCA 90 bp GGAAGGCATCCTGTTGCTTTCACTCTTCTGTGTTCCTGGTTTCTAGCTTCTTCTCCACTCCCGCCTCGCTaGTTCAGCCACACTCAGTGC +
Preference number: 4 (lower is better)
Translates to: GRHPVAFTLLCSWFLASSPLPPR*FSHTQC
Trigger: GCACTGAGTGTGGCTGAAGCAGCGAGGCGGGAGTGG...AGAAGAAGCTAGAAACCAGGAACACAGAAGAGTGAAAGCAACAGGATGCCTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678696.1
CDS-3UTR GCA 90 bp GGAAGGCATCCTGTTGCTTTCACTCTTCTGTGTTCCTGGTTTCTAGCTTCTTCTGCCGGGAAAGTTCTTTaGTGCTGCAGCCGCTCGCCG +
Preference number: 4 (lower is better)
Translates to: GRHPVAFTLLCSWFLASSAGKVL*CCSRSP
Trigger: CGGCGAGCGGCTGCAGCAGCAAAGAACTTTCCCGGC...AGAAGAAGCTAGAAACCAGGAACACAGAAGAGTGAAAGCAACAGGATGCCTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678696.1
CDS-3UTR GCA 90 bp CCATCACGAGTTATGCACACAGTTAACGAAGGCAGGCCAGAAAGAGTTCATCTGACTGAGCGCTCTTCGTaGGCAGCGGTTCCTCGGAGT +
Preference number: 4 (lower is better)
Translates to: PSRVMHTVNEGRPERVHLTERSS*AAVPRS
Trigger: ACTCCGAGGAACCGCTGCGCACGAAGAGCGCTCAGT...CAGATGAACTCTTTCTGGCCTGCCTTCGTTAACTGTGTGCATAACTCGTGATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678696.1
CDS-3UTR GCA 90 bp TCGAATGTTAGGTCCATGCAGTTCTTGGTCAATGTTAACGAAAAGTCCAACGTTTGGTGCGGCGGCTGCTaGTGCTGCTGGGGTTGCGCG +
Preference number: 4 (lower is better)
Translates to: SNVRSMQFLVNVNEKSNVWCGGC*CCWGCA
Trigger: CGCGCAACCCCAGCAGCAGCAGCAGCCGCCGCACCA...AACGTTGGACTTTTCGTTAACATTGACCAAGAACTGCATGGACCTAACATTCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS-3UTR GCA 90 bp AAGAGTTCATCTGTAGGCTCAGCCTCGCTCTCACAAACCTCCCTCCTGCCGCCCAATGTTTGCAACTGCTaGGTTAGCATGAGTTGGCAC +
Preference number: 4 (lower is better)
Translates to: KSSSVGSASLSQTSLLPPNVCNC*VSMSWH
Trigger: GTGCCAACTCATGCTAACGCAGCAGTTGCAAACATT...GGGCGGCAGGAGGGAGGTTTGTGAGAGCGAGGCTGAGCCTACAGATGAACTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS-3UTR GCA 90 bp GGAAGGCATCCTGTTGCTTTCACTCTTCTGTGTTCCTGGTTTCTAGCTTCTTCTAGTCCTTCCCACTCGTaGACACTGGGGGCGCCGTCA +
Preference number: 4 (lower is better)
Translates to: GRHPVAFTLLCSWFLASSSPSHS*TLGAPS
Trigger: TGACGGCGCCCCCAGTGTGCACGAGTGGGAAGGACT...AGAAGAAGCTAGAAACCAGGAACACAGAAGAGTGAAAGCAACAGGATGCCTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000678696.1
CDS-3UTR CCA 90 bp TCGAATGTTAGGTCCATGCAGTTCTTGGTCAATGTTAACGAAAAGTCCAACGTTCCTCCCGGGGGCGGCTaGAGACCAGGCTCTCTGGAC +
Preference number: 4 (lower is better)
Translates to: SNVRSMQFLVNVNEKSNVPPGGG*RPGSLD
Trigger: GTCCAGAGAGCCTGGTCTCCAGCCGCCCCCGGGAGG...AACGTTGGACTTTTCGTTAACATTGACCAAGAACTGCATGGACCTAACATTCGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS-3UTR CCA 90 bp TTAACGAAGGCAGGCCAGAAAGAGTTCATCTGTAGGCTCAGCCTCGCTCTCACATGGTCTTTACCGCCGTaGAGAAGCCTAAGACGCAGG +
Preference number: 4 (lower is better)
Translates to: LTKAGQKEFICRLSLALTWSLPP*RSLRRR
Trigger: CCTGCGTCTTAGGCTTCTCCACGGCGGTAAAGACCA...TGTGAGAGCGAGGCTGAGCCTACAGATGAACTCTTTCTGGCCTGCCTTCGTTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS-3UTR CCA 90 bp GTACATACACAGTTAACGAAGGCAGGCCAGAAAGAGTTCATCTGTAGGCTCAGCCTCTCCGCCGCCTTCTaGTCTTTACCGCCGTGGAGA +
Preference number: 4 (lower is better)
Translates to: VHTQLTKAGQKEFICRLSLSAAF*SLPPWR
Trigger: TCTCCACGGCGGTAAAGACCAGAAGGCGGCGGAGAG...GCTGAGCCTACAGATGAACTCTTTCTGGCCTGCCTTCGTTAACTGTGTATGTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371222.4
CDS-3UTR CCA 90 bp TTAACGAAGGCAGGCCAGAAAGAGTTCATCTGTAGGCTCAGCCTCGCTCTCACACATCTGTCACGTTCTTaGGGCACAGGAACTGGGTGG +
Preference number: 4 (lower is better)
Translates to: LTKAGQKEFICRLSLALTHLSRS*GTGTGW
Trigger: CCACCCAGTTCCTGTGCCCCAAGAACGTGACAGATG...TGTGAGAGCGAGGCTGAGCCTACAGATGAACTCTTTCTGGCCTGCCTTCGTTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS-3UTR CCA 90 bp GGAAGGCATCCTGTTGCTTTCACTCTTCTGTGTTCCTGGTTTCTAGCTTCTTCTCTGGGCAGCGTGTTCTaGCTGTGCAGTTCGGCCAGG +
Preference number: 4 (lower is better)
Translates to: GRHPVAFTLLCSWFLASSLGSVF*LCSSAR
Trigger: CCTGGCCGAACTGCACAGCCAGAACACGCTGCCCAG...AGAAGAAGCTAGAAACCAGGAACACAGAAGAGTGAAAGCAACAGGATGCCTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678696.1
CDS-3UTR CCA 90 bp AAGAGTTCATCTGTAGGCTCAGCCTCGCTCTCACAAACCTCCCTCCTGCCGCCCTTCCATATAGATAGCTaGGGGAGGAGGAGTATAACC +
Preference number: 4 (lower is better)
Translates to: KSSSVGSASLSQTSLLPPFHIDS*GRRSIT
Trigger: GGTTATACTCCTCCTCCCCCAGCTATCTATATGGAA...GGGCGGCAGGAGGGAGGTTTGTGAGAGCGAGGCTGAGCCTACAGATGAACTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371222.4
CDS-3UTR TCA 90 bp TATTATGTCCCCACTCTGTTTCAAATTCACCTGCTTTCTCCGTCACCTGCATTACCACGTCGGGCGAGGTaGGGAGGTCCGAGTTCTTGG +
Preference number: 4 (lower is better)
Translates to: YYVPTLFQIHLLSPSPALPRRAR*GGPSSW
Trigger: CCAAGAACTCGGACCTCCTCACCTCGCCCGACGTGG...TAATGCAGGTGACGGAGAAAGCAGGTGAATTTGAAACAGAGTGGGGACATAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678696.1
CDS-3UTR GCA 90 bp CATGAGGGAAGGCATCCTGTTGCTTTCACTCTTCTGTGTTCCTGGTTTCTAGCTGGGAAAGTTCTTTGCTaGTGCAGCCGCTCGCCGACT +
Preference number: 4 (lower is better)
Translates to: HEGRHPVAFTLLCSWFLAGKVLC*CSRSPT
Trigger: AGTCGGCGAGCGGCTGCAGCAGCAAAGAACTTTCCC...AGCTAGAAACCAGGAACACAGAAGAGTGAAAGCAACAGGATGCCTTCCCTCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678696.1
CDS-3UTR GCA 90 bp CCATCACGAGTTATGCACACAGTTAACGAAGGCAGGCCAGAAAGAGTTCATCTGGAGGTTAGTTTGGGCTaGGCGCACAAGTTTCGGGGC +
Preference number: 4 (lower is better)
Translates to: PSRVMHTVNEGRPERVHLEVSLG*AHKFRG
Trigger: GCCCCGAAACTTGTGCGCGCAGCCCAAACTAACCTC...CAGATGAACTCTTTCTGGCCTGCCTTCGTTAACTGTGTGCATAACTCGTGATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678696.1
CDS-3UTR GCA 90 bp ACTTTGAGGGTTGATCCATCACGAGTTATGCACACAGTTAACGAAGGCAGGCCAACTTGGAGGCAGCGATaGGGTTCCTCATGCGCTTCC +
Preference number: 4 (lower is better)
Translates to: TLRVDPSRVMHTVNEGRPTWRQR*GSSCAS
Trigger: GGAAGCGCATGAGGAACCGCATCGCTGCCTCCAAGT...TGGCCTGCCTTCGTTAACTGTGTGCATAACTCGTGATGGATCAACCCTCAAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678696.1
CDS-3UTR GCA 90 bp TCAATGTTAACGAAAAGTCCAACGTTCCGTTCGCGCGGGGACAGCCCGTCCGCAAATGTTTGCAACTGCTaGGTTAGCATGAGTTGGCAC +
Preference number: 4 (lower is better)
Translates to: SMLTKSPTFRSRGDSPSANVCNC*VSMSWH
Trigger: GTGCCAACTCATGCTAACGCAGCAGTTGCAAACATT...TGCGGACGGGCTGTCCCCGCGCGAACGGAACGTTGGACTTTTCGTTAACATTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS-3UTR GCA 90 bp AAGAGTTCATCTGTAGGCTCAGCCTCGCTCTCACAAACCTCCCTCCTGCCGCCCCAAAATGTTTGCAACTaGTGCGTTAGCATGAGTTGG +
Preference number: 4 (lower is better)
Translates to: KSSSVGSASLSQTSLLPPQNVCN*CVSMSW
Trigger: CCAACTCATGCTAACGCAGCAGTTGCAAACATTTTG...GGGCGGCAGGAGGGAGGTTTGTGAGAGCGAGGCTGAGCCTACAGATGAACTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS-3UTR CCA 90 bp GTACATACACAGTTAACGAAGGCAGGCCAGAAAGAGTTCATCTGTAGGCTCAGCGGAGACCAGGCTCTCTaGACACTCCCGAAACACCAG +
Preference number: 4 (lower is better)
Translates to: VHTQLTKAGQKEFICRLSGDQAL*TLPKHQ
Trigger: CTGGTGTTTCGGGAGTGTCCAGAGAGCCTGGTCTCC...GCTGAGCCTACAGATGAACTCTTTCTGGCCTGCCTTCGTTAACTGTGTATGTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371222.4
CDS-3UTR CCA 90 bp GGTATTATGTCCCCACTCTGTTTCAAATTCACCTGCTTTCTCCGTCACCTGCATCTCTCCGCCGCCTTCTaGTCTTTACCGCCGTGGAGA +
Preference number: 4 (lower is better)
Translates to: GIMSPLCFKFTCFLRHLHLSAAF*SLPPWR
Trigger: TCTCCACGGCGGTAAAGACCAGAAGGCGGCGGAGAG...ATGCAGGTGACGGAGAAAGCAGGTGAATTTGAAACAGAGTGGGGACATAATACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678696.1
CDS-3UTR CCA 90 bp AAGAGTTCATCTGTAGGCTCAGCCTCGCTCTCACAAACCTCCCTCCTGCCGCCCTCTGTTTCAGGATCTTaGGGTTACTGTAGCCATAAG +
Preference number: 4 (lower is better)
Translates to: KSSSVGSASLSQTSLLPPSVSGS*GYCSHK
Trigger: CTTATGGCTACAGTAACCCCAAGATCCTGAAACAGA...GGGCGGCAGGAGGGAGGTTTGTGAGAGCGAGGCTGAGCCTACAGATGAACTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS-3UTR GCA 90 bp CCATCACGAGTTATGCACACAGTTAACGAAGGCAGGCCAGAAAGAGTTCATCTGGACGCAGGAAAGGCTTaGAAAAGTTGGCTCCGGGAC +
Preference number: 4 (lower is better)
Translates to: PSRVMHTVNEGRPERVHLDAGKA*KSWLRD
Trigger: GTCCCGGAGCCAACTTTTGCAAGCCTTTCCTGCGTC...CAGATGAACTCTTTCTGGCCTGCCTTCGTTAACTGTGTGCATAACTCGTGATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678696.1
CDS-3UTR GCA 90 bp GTACATACACAGTTAACGAAGGCAGGCCAGAAAGAGTTCATCTGTAGGCTCAGCTCGGCGAAGCCCTCCTaGTCATCTGTCACGTTCTTG +
Preference number: 4 (lower is better)
Translates to: VHTQLTKAGQKEFICRLSSAKPS*SSVTFL
Trigger: CAAGAACGTGACAGATGAGCAGGAGGGCTTCGCCGA...GCTGAGCCTACAGATGAACTCTTTCTGGCCTGCCTTCGTTAACTGTGTATGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371222.4
CDS-3UTR GCA 90 bp TCAATGTTAACGAAAAGTCCAACGTTCCGTTCGCGCGGGGACAGCCCGTCCGCACAAAATGTTTGCAACTaGTGCGTTAGCATGAGTTGG +
Preference number: 4 (lower is better)
Translates to: SMLTKSPTFRSRGDSPSAQNVCN*CVSMSW
Trigger: CCAACTCATGCTAACGCAGCAGTTGCAAACATTTTG...TGCGGACGGGCTGTCCCCGCGCGAACGGAACGTTGGACTTTTCGTTAACATTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS-3UTR GCA 90 bp AAGAGTTCATCTGTAGGCTCAGCCTCGCTCTCACAAACCTCCCTCCTGCCGCCCTCTCTTCAAAATGTTTaGAACTGCTGCGTTAGCATG +
Preference number: 4 (lower is better)
Translates to: KSSSVGSASLSQTSLLPPSLQNV*NCCVSM
Trigger: CATGCTAACGCAGCAGTTGCAAACATTTTGAAGAGA...GGGCGGCAGGAGGGAGGTTTGTGAGAGCGAGGCTGAGCCTACAGATGAACTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS-3UTR GCA 90 bp TCAATGTTAACGAAAAGTCCAACGTTCCGTTCGCGCGGGGACAGCCCGTCCGCATCTGCCACCAATTCCTaGTTTGAGAATAAGCACCTA +
Preference number: 4 (lower is better)
Translates to: SMLTKSPTFRSRGDSPSASATNS*FENKHL
Trigger: TAGGTGCTTATTCTCAAAGCAGGAATTGGTGGCAGA...TGCGGACGGGCTGTCCCCGCGCGAACGGAACGTTGGACTTTTCGTTAACATTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371222.4
CDS-3UTR CCA 90 bp GTACATACACAGTTAACGAAGGCAGGCCAGAAAGAGTTCATCTGTAGGCTCAGCACTATACTGCCGACCTaGCTGGCTGGCTGTGTCTGT +
Preference number: 4 (lower is better)
Translates to: VHTQLTKAGQKEFICRLSTILPT*LAGCVC
Trigger: ACAGACACAGCCAGCCAGCCAGGTCGGCAGTATAGT...GCTGAGCCTACAGATGAACTCTTTCTGGCCTGCCTTCGTTAACTGTGTATGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371222.4
CDS-3UTR CCA 90 bp TATTATGTCCCCACTCTGTTTCAAATTCACCTGCTTTCTCCGTCACCTGCATTAGGAGGTCCGAGTTCTTaGCGCGGAGGTGCGGCTTCA +
Preference number: 4 (lower is better)
Translates to: YYVPTLFQIHLLSPSPALGGPSS*RGGAAS
Trigger: TGAAGCCGCACCTCCGCGCCAAGAACTCGGACCTCC...TAATGCAGGTGACGGAGAAAGCAGGTGAATTTGAAACAGAGTGGGGACATAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678696.1
CDS-3UTR CCA 90 bp TCGAATGTTAGGTCCATGCAGTTCTTGGTCAATGTTAACGAAAAGTCCAACGTTTTGGGGCACAGGAACTaGGTGGGGGTCGGCGTGGTG +
Preference number: 4 (lower is better)
Translates to: SNVRSMQFLVNVNEKSNVLGHRN*VGVGVV
Trigger: CACCACGCCGACCCCCACCCAGTTCCTGTGCCCCAA...AACGTTGGACTTTTCGTTAACATTGACCAAGAACTGCATGGACCTAACATTCGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS-3UTR CCA 90 bp GGTATTATGTCCCCACTCTGTTTCAAATTCACCTGCTTTCTCCGTCACCTGCATGCTGCTCAGCGCGCCTaGGTTGAAGTTGCTGAGGTT +
Preference number: 4 (lower is better)
Translates to: GIMSPLCFKFTCFLRHLHAAQRA*VEVAEV
Trigger: AACCTCAGCAACTTCAACCCAGGCGCGCTGAGCAGC...ATGCAGGTGACGGAGAAAGCAGGTGAATTTGAAACAGAGTGGGGACATAATACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678696.1
CDS-3UTR CCA 90 bp CCATCACGAGTTATGCACACAGTTAACGAAGGCAGGCCAGAAAGAGTTCATCTGTCCTTTTTCGGCACTTaGAGGCAGCGATGCGGTTCC +
Preference number: 4 (lower is better)
Translates to: PSRVMHTVNEGRPERVHLSFFGT*RQRCGS
Trigger: GGAACCGCATCGCTGCCTCCAAGTGCCGAAAAAGGA...CAGATGAACTCTTTCTGGCCTGCCTTCGTTAACTGTGTGCATAACTCGTGATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000678696.1
CDS-3UTR TCA 90 bp CCATCACGAGTTATGCACACAGTTAACGAAGGCAGGCCAGAAAGAGTTCATCTGCTGGGCTTTAGAACTTaGGGGTTGGCCAGGTTGACT +
Preference number: 4 (lower is better)
Translates to: PSRVMHTVNEGRPERVHLLGFRT*GLARLT
Trigger: AGTCAACCTGGCCAACCCTCAAGTTCTAAAGCCCAG...CAGATGAACTCTTTCTGGCCTGCCTTCGTTAACTGTGTGCATAACTCGTGATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678696.1
CDS-3UTR GCA 90 bp GGAAGGCATCCTGTTGCTTTCACTCTTCTGTGTTCCTGGTTTCTAGCTTCTTCTAAAGTTCTTTGCTGCTaGAGCCGCTCGCCGACTTCC +
Preference number: 4 (lower is better)
Translates to: GRHPVAFTLLCSWFLASSKVLCC*SRSPTS
Trigger: GGAAGTCGGCGAGCGGCTGCAGCAGCAAAGAACTTT...AGAAGAAGCTAGAAACCAGGAACACAGAAGAGTGAAAGCAACAGGATGCCTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678696.1
CDS-3UTR GCA 90 bp GGTATTATGTCCCCACTCTGTTTCAAATTCACCTGCTTTCTCCGTCACCTGCATTCGGCGAAGCCCTCCTaGTCATCTGTCACGTTCTTG +
Preference number: 4 (lower is better)
Translates to: GIMSPLCFKFTCFLRHLHSAKPS*SSVTFL
Trigger: CAAGAACGTGACAGATGAGCAGGAGGGCTTCGCCGA...ATGCAGGTGACGGAGAAAGCAGGTGAATTTGAAACAGAGTGGGGACATAATACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678696.1
CDS-3UTR GCA 90 bp TCAATGTTAACGAAAAGTCCAACGTTCCGTTCGCGCGGGGACAGCCCGTCCGCACGAATGTTAGGTCCATaGAGTTCTTGGTCAATGTTA +
Preference number: 4 (lower is better)
Translates to: SMLTKSPTFRSRGDSPSARMLGP*SSWSML
Trigger: TAACATTGACCAAGAACTGCATGGACCTAACATTCG...TGCGGACGGGCTGTCCCCGCGCGAACGGAACGTTGGACTTTTCGTTAACATTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS-3UTR GCA 90 bp CATGAGGGAAGGCATCCTGTTGCTTTCACTCTTCTGTGTTCCTGGTTTCTAGCTGCTTTCTCCGTCACCTaGATTAGTGGAGGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: HEGRHPVAFTLLCSWFLAAFSVT*ISGGRK
Trigger: CTTCCTGCCTCCACTAATGCAGGTGACGGAGAAAGC...AGCTAGAAACCAGGAACACAGAAGAGTGAAAGCAACAGGATGCCTTCCCTCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678696.1
CDS-3UTR CCA 90 bp GGAAGGCATCCTGTTGCTTTCACTCTTCTGTGTTCCTGGTTTCTAGCTTCTTCTACTATACTGCCGACCTaGCTGGCTGGCTGTGTCTGT +
Preference number: 4 (lower is better)
Translates to: GRHPVAFTLLCSWFLASSTILPT*LAGCVC
Trigger: ACAGACACAGCCAGCCAGCCAGGTCGGCAGTATAGT...AGAAGAAGCTAGAAACCAGGAACACAGAAGAGTGAAAGCAACAGGATGCCTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678696.1
CDS-3UTR CCA 90 bp ACTTTGAGGGTTGATCCATCACGAGTTATGCACACAGTTAACGAAGGCAGGCCAAAGGCTTGCAAAAGTTaGCTCCGGGACTCTGCCACT +
Preference number: 4 (lower is better)
Translates to: TLRVDPSRVMHTVNEGRPKACKS*LRDSAT
Trigger: AGTGGCAGAGTCCCGGAGCCAACTTTTGCAAGCCTT...TGGCCTGCCTTCGTTAACTGTGTGCATAACTCGTGATGGATCAACCCTCAAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678696.1
CDS-3UTR CCA 90 bp TCAATGTTAACGAAAAGTCCAACGTTCCGTTCGCGCGGGGACAGCCCGTCCGCACACCCACTGTTAACGTaGTTCATGACTTTCTGTTTA +
Preference number: 4 (lower is better)
Translates to: SMLTKSPTFRSRGDSPSAHPLLT*FMTFCL
Trigger: TAAACAGAAAGTCATGAACCACGTTAACAGTGGGTG...TGCGGACGGGCTGTCCCCGCGCGAACGGAACGTTGGACTTTTCGTTAACATTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS-3UTR TCA 90 bp TATTATGTCCCCACTCTGTTTCAAATTCACCTGCTTTCTCCGTCACCTGCATTAGGAGGAACGAGGCGTTaGGGGCATCGTCATAGAAGG +
Preference number: 4 (lower is better)
Translates to: YYVPTLFQIHLLSPSPALGGTRR*GHRHRR
Trigger: CCTTCTATGACGATGCCCTCAACGCCTCGTTCCTCC...TAATGCAGGTGACGGAGAAAGCAGGTGAATTTGAAACAGAGTGGGGACATAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678696.1
CDS-3UTR TCA 90 bp AAATGGTCACAGCACATGCCACTTGATACAATCCAAACTTTGAAATGTTTGACTGGGTCGGCGTGGTGGTaGTGTGCCCGTTGCTGGACT +
Preference number: 4 (lower is better)
Translates to: KWSQHMPLDTIQTLKCLTGSAWW*CARCWT
Trigger: AGTCCAGCAACGGGCACATCACCACCACGCCGACCC...AGTCAAACATTTCAAAGTTTGGATTGTATCAAGTGGCATGTGCTGTGACCATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371222.4
CDS-3UTR GCA 90 bp TTAACGAAGGCAGGCCAGAAAGAGTTCATCTGTAGGCTCAGCCTCGCTCTCACATTTCTGTTTAAGCTGTaGCACCTGTTCCCTGAGCAT +
Preference number: 4 (lower is better)
Translates to: LTKAGQKEFICRLSLALTFLFKL*HLFPEH
Trigger: ATGCTCAGGGAACAGGTGGCACAGCTTAAACAGAAA...TGTGAGAGCGAGGCTGAGCCTACAGATGAACTCTTTCTGGCCTGCCTTCGTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS-3UTR TCA 90 bp AAATGGTCACAGCACATGCCACTTGATACAATCCAAACTTTGAAATGTTTGACTGCTTCCTCTCCGCCTTaGTCCGCTCCTGGGACTCCA +
Preference number: 4 (lower is better)
Translates to: KWSQHMPLDTIQTLKCLTASSPP*SAPGTP
Trigger: TGGAGTCCCAGGAGCGGATCAAGGCGGAGAGGAAGC...AGTCAAACATTTCAAAGTTTGGATTGTATCAAGTGGCATGTGCTGTGACCATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371222.4
CDS-3UTR CCA 90 bp AAATGGTCACAGCACATGCCACTTGATACAATCCAAACTTTGAAATGTTTGACTGCCGACCTGGCTGGCTaGCTGTGTCTGTCTGTCTGC +
Preference number: 4 (lower is better)
Translates to: KWSQHMPLDTIQTLKCLTADLAG*LCLSVC
Trigger: GCAGACAGACAGACACAGCCAGCCAGCCAGGTCGGC...AGTCAAACATTTCAAAGTTTGGATTGTATCAAGTGGCATGTGCTGTGACCATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371222.4
CDS-3UTR TCA 90 bp AAATGGTCACAGCACATGCCACTTGATACAATCCAAACTTTGAAATGTTTGACTCGCGCTACCCGGCTTTaGAAAGTCGCGGTCACTCAC +
Preference number: 4 (lower is better)
Translates to: KWSQHMPLDTIQTLKCLTRATRL*KVAVTH
Trigger: GTGAGTGACCGCGACTTTTCAAAGCCGGGTAGCGCG...AGTCAAACATTTCAAAGTTTGGATTGTATCAAGTGGCATGTGCTGTGACCATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371222.4
CDS-3UTR TCA 90 bp CCATCACGAGTTATGCACACAGTTAACGAAGGCAGGCCAGAAAGAGTTCATCTGGTTGACTTTGAGGGTTaGTCCATCACGAGTTATGCA +
Preference number: 4 (lower is better)
Translates to: PSRVMHTVNEGRPERVHLVDFEG*SITSYA
Trigger: TGCATAACTCGTGATGGATCAACCCTCAAAGTCAAC...CAGATGAACTCTTTCTGGCCTGCCTTCGTTAACTGTGTGCATAACTCGTGATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678696.1
CDS-3UTR GCA 90 bp TCGAATGTTAGGTCCATGCAGTTCTTGGTCAATGTTAACGAAAAGTCCAACGTTAAAGTTCTTTGCTGCTaGAGCCGCTCGCCGACTTCC +
Preference number: 4 (lower is better)
Translates to: SNVRSMQFLVNVNEKSNVKVLCC*SRSPTS
Trigger: GGAAGTCGGCGAGCGGCTGCAGCAGCAAAGAACTTT...AACGTTGGACTTTTCGTTAACATTGACCAAGAACTGCATGGACCTAACATTCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS-3UTR TCA 90 bp CCATCACGAGTTATGCACACAGTTAACGAAGGCAGGCCAGAAAGAGTTCATCTGGAATCATTCTTAAGCTaGGGGTATTATGTCCCCACT +
Preference number: 4 (lower is better)
Translates to: PSRVMHTVNEGRPERVHLESFLS*GYYVPT
Trigger: AGTGGGGACATAATACCCTCAGCTTAAGAATGATTC...CAGATGAACTCTTTCTGGCCTGCCTTCGTTAACTGTGTGCATAACTCGTGATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678696.1
CDS-3UTR GCA 90 bp AAATGGTCACAGCACATGCCACTTGATACAATCCAAACTTTGAAATGTTTGACTACGTCCTTCTTCTCTTaGGTGGCTCTCCGCCGCCTT +
Preference number: 4 (lower is better)
Translates to: KWSQHMPLDTIQTLKCLTTSFFS*VALRRL
Trigger: AAGGCGGCGGAGAGCCACGCAAGAGAAGAAGGACGT...AGTCAAACATTTCAAAGTTTGGATTGTATCAAGTGGCATGTGCTGTGACCATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371222.4
CDS-3UTR GCA 90 bp AAATGGTCACAGCACATGCCACTTGATACAATCCAAACTTTGAAATGTTTGACTACTTGGAGGCAGCGATaGGGTTCCTCATGCGCTTCC +
Preference number: 4 (lower is better)
Translates to: KWSQHMPLDTIQTLKCLTTWRQR*GSSCAS
Trigger: GGAAGCGCATGAGGAACCGCATCGCTGCCTCCAAGT...AGTCAAACATTTCAAAGTTTGGATTGTATCAAGTGGCATGTGCTGTGACCATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371222.4
CDS-3UTR GCA 90 bp CATGAGGGAAGGCATCCTGTTGCTTTCACTCTTCTGTGTTCCTGGTTTCTAGCTTGTTTCAAATTCACCTaGTTTCTCCGTCACCTGCAT +
Preference number: 4 (lower is better)
Translates to: HEGRHPVAFTLLCSWFLACFKFT*FLRHLH
Trigger: ATGCAGGTGACGGAGAAAGCAGGTGAATTTGAAACA...AGCTAGAAACCAGGAACACAGAAGAGTGAAAGCAACAGGATGCCTTCCCTCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678696.1
CDS-3UTR GCA 90 bp GTACATACACAGTTAACGAAGGCAGGCCAGAAAGAGTTCATCTGTAGGCTCAGCCGAATGTTAGGTCCATaGAGTTCTTGGTCAATGTTA +
Preference number: 4 (lower is better)
Translates to: VHTQLTKAGQKEFICRLSRMLGP*SSWSML
Trigger: TAACATTGACCAAGAACTGCATGGACCTAACATTCG...GCTGAGCCTACAGATGAACTCTTTCTGGCCTGCCTTCGTTAACTGTGTATGTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371222.4
CDS-3UTR CCA 90 bp TCGAATGTTAGGTCCATGCAGTTCTTGGTCAATGTTAACGAAAAGTCCAACGTTTGCGTTAGCATGAGTTaGCACCCACTGTTAACGTGG +
Preference number: 4 (lower is better)
Translates to: SNVRSMQFLVNVNEKSNVCVSMS*HPLLTW
Trigger: CCACGTTAACAGTGGGTGCCAACTCATGCTAACGCA...AACGTTGGACTTTTCGTTAACATTGACCAAGAACTGCATGGACCTAACATTCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS-3UTR CCA 90 bp GTACATACACAGTTAACGAAGGCAGGCCAGAAAGAGTTCATCTGTAGGCTCAGCGGTCCATGCAGTTCTTaGTCAATGTTAACGAAAAGT +
Preference number: 4 (lower is better)
Translates to: VHTQLTKAGQKEFICRLSGPCSS*SMLTKS
Trigger: ACTTTTCGTTAACATTGACCAAGAACTGCATGGACC...GCTGAGCCTACAGATGAACTCTTTCTGGCCTGCCTTCGTTAACTGTGTATGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371222.4
CDS-3UTR CCA 90 bp TTATGCACACAGTTAACGAAGGCAGGCCAGAAAGAGTTCATCTGTAGGCTCAGCGGTCCATGCAGTTCTTaGTCAATGTTAACGAAAAGT +
Preference number: 4 (lower is better)
Translates to: LCTQLTKAGQKEFICRLSGPCSS*SMLTKS
Trigger: ACTTTTCGTTAACATTGACCAAGAACTGCATGGACC...GCTGAGCCTACAGATGAACTCTTTCTGGCCTGCCTTCGTTAACTGTGTGCATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678696.1
CDS-3UTR CCA 90 bp GGAAGGCATCCTGTTGCTTTCACTCTTCTGTGTTCCTGGTTTCTAGCTTCTTCTACACTCACTAAGTACTaGGCTTTAGAACTTGAGGGT +
Preference number: 4 (lower is better)
Translates to: GRHPVAFTLLCSWFLASSTLTKY*ALELEG
Trigger: ACCCTCAAGTTCTAAAGCCCAGTACTTAGTGAGTGT...AGAAGAAGCTAGAAACCAGGAACACAGAAGAGTGAAAGCAACAGGATGCCTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678696.1
CDS-3UTR CCA 90 bp GTACATACACAGTTAACGAAGGCAGGCCAGAAAGAGTTCATCTGTAGGCTCAGCATTTACAAACAACACTaGGCAGGATACCCAAACAAA +
Preference number: 4 (lower is better)
Translates to: VHTQLTKAGQKEFICRLSIYKQH*AGYPNK
Trigger: TTTGTTTGGGTATCCTGCCCAGTGTTGTTTGTAAAT...GCTGAGCCTACAGATGAACTCTTTCTGGCCTGCCTTCGTTAACTGTGTATGTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371222.4
CDS-3UTR CCA 90 bp TCGAATGTTAGGTCCATGCAGTTCTTGGTCAATGTTAACGAAAAGTCCAACGTTGACACTGTGTGTGGCTaGATGTATGAATGTGCTAAC +
Preference number: 4 (lower is better)
Translates to: SNVRSMQFLVNVNEKSNVDTVCG*MYECAN
Trigger: GTTAGCACATTCATACATCCAGCCACACACAGTGTC...AACGTTGGACTTTTCGTTAACATTGACCAAGAACTGCATGGACCTAACATTCGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678696.1
CDS-3UTR GCA 90 bp TATTATGTCCCCACTCTGTTTCAAATTCACCTGCTTTCTCCGTCACCTGCATTATCTCTTCAAAATGTTTaGAACTGCTGCGTTAGCATG +
Preference number: 4 (lower is better)
Translates to: YYVPTLFQIHLLSPSPALSLQNV*NCCVSM
Trigger: CATGCTAACGCAGCAGTTGCAAACATTTTGAAGAGA...TAATGCAGGTGACGGAGAAAGCAGGTGAATTTGAAACAGAGTGGGGACATAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678696.1
CDS-3UTR TCA 90 bp TCGAATGTTAGGTCCATGCAGTTCTTGGTCAATGTTAACGAAAAGTCCAACGTTACAGCACATGCCACTTaGTACAATCCAAACTTTGAA +
Preference number: 4 (lower is better)
Translates to: SNVRSMQFLVNVNEKSNVTAHAT*YNPNFE
Trigger: TTCAAAGTTTGGATTGTATCAAGTGGCATGTGCTGT...AACGTTGGACTTTTCGTTAACATTGACCAAGAACTGCATGGACCTAACATTCGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371222.4
CDS-3UTR GCA 90 bp AAATGGTCACAGCACATGCCACTTGATACAATCCAAACTTTGAAATGTTTGACTTTTCTGTTTAAGCTGTaGCACCTGTTCCCTGAGCAT +
Preference number: 4 (lower is better)
Translates to: KWSQHMPLDTIQTLKCLTFLFKL*HLFPEH
Trigger: ATGCTCAGGGAACAGGTGGCACAGCTTAAACAGAAA...AGTCAAACATTTCAAAGTTTGGATTGTATCAAGTGGCATGTGCTGTGACCATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371222.4
CDS-3UTR CCA 90 bp TCGAATGTTAGGTCCATGCAGTTCTTGGTCAATGTTAACGAAAAGTCCAACGTTCACCCACTGTTAACGTaGTTCATGACTTTCTGTTTA +
Preference number: 4 (lower is better)
Translates to: SNVRSMQFLVNVNEKSNVHPLLT*FMTFCL
Trigger: TAAACAGAAAGTCATGAACCACGTTAACAGTGGGTG...AACGTTGGACTTTTCGTTAACATTGACCAAGAACTGCATGGACCTAACATTCGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS-3UTR TCA 90 bp AAATGGTCACAGCACATGCCACTTGATACAATCCAAACTTTGAAATGTTTGACTGCTAGTATCTACAGATaGTGCAGAAAAGAGGTTAGG +
Preference number: 4 (lower is better)
Translates to: KWSQHMPLDTIQTLKCLTASIYR*CRKEVR
Trigger: CCTAACCTCTTTTCTGCATCATCTGTAGATACTAGC...AGTCAAACATTTCAAAGTTTGGATTGTATCAAGTGGCATGTGCTGTGACCATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371222.4
CDS-3UTR CCA 90 bp GCTAACAGCTTAATTCTTTTAAGAACACTCACTAAGTACTGGGCTTTAGAACTTCAACCCAGTCCAACTTaGATACCCTTGGCTTTAGTT +
Preference number: 4 (lower is better)
Translates to: ANSLILLRTLTKYWALELQPSPT*IPLALV
Trigger: AACTAAAGCCAAGGGTATCCAAGTTGGACTGGGTTG...AAGTTCTAAAGCCCAGTACTTAGTGAGTGTTCTTAAAAGAATTAAGCTGTTAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678696.1
CDS GCA 90 bp TCCCAGAGCAGCGGCTCTCCCCGCGGAGCGGATCAGTGCGGACCCTaGAGTGGCCGGCCGGCGGCGGGTCTTGGCCGCCCGGACTCCGAC +
Preference number: 5 (lower is better)
Translates to: SQSSGSPRGADQCGP*SGRPAAGLGRPDSD
Trigger: GTCGGAGTCCGGGCGGCCAAGACCCGCCGCCGGCCGGCCACTGCAGGGTCCGCACTGATCCGCTCCGCGGGGAGAGCCGCTGCTCTGGGA
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS GCA 90 bp GCCGCTGCCCCCTGCCACCGAGGCTACCGCGGGAGCCACCATGCCTaGCCCGTTGACCGGCTGCGCCGCCGACGTGACGCTGGGCAGCGT +
Preference number: 5 (lower is better)
Translates to: AAAPCHRGYRGSHHA*PVDRLRRRRDAGQR
Trigger: ACGCTGCCCAGCGTCACGTCGGCGGCGCAGCCGGTCAACGGGGCAGGCATGGTGGCTCCCGCGGTAGCCTCGGTGGCAGGGGGCAGCGGC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS CCA 90 bp GAGCAGCGGCTCTCCCCGCGGAGCGGATCAGTGCGGACCCTGCAGTaGCCGGCCGGCGGCGGGTCTTGGCCGCCCGGACTCCGACGACTT +
Preference number: 5 (lower is better)
Translates to: EQRLSPRSGSVRTLQ*PAGGGSWPPGLRRL
Trigger: AAGTCGTCGGAGTCCGGGCGGCCAAGACCCGCCGCCGGCCGGCCACTGCAGGGTCCGCACTGATCCGCTCCGCGGGGAGAGCCGCTGCTC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS-3UTR CAA 90 bp CGTTCGCGCGGGGACAGCCCGTCCGCAAAGCGGGGCAGCCCGCAGGCGGCCGCTCCGGGACTCTGCCACTaGTCTCCGGTCCTCCCAGCC +
Preference number: 5 (lower is better)
Translates to: RSRGDSPSAKRGSPQAAAPGLCH*SPVLPA
Trigger: GGCTGGGAGGACCGGAGACAAGTGGCAGAGTCCCGG...AGCGGCCGCCTGCGGGCTGCCCCGCTTTGCGGACGGGCTGTCCCCGCGCGAACG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS GCA 90 bp GAACTCACTTCCCAGAGCAGCGGCTCTCCCCGCGGAGCGGATCAGTaGGGACCCTGCAGTGGCCGGCCGGCGGCGGGTCTTGGCCGCCCG +
Preference number: 5 (lower is better)
Translates to: ELTSQSSGSPRGADQ*GPCSGRPAAGLGRP
Trigger: CGGGCGGCCAAGACCCGCCGCCGGCCGGCCACTGCAGGGTCCGCACTGATCCGCTCCGCGGGGAGAGCCGCTGCTCTGGGAAGTGAGTTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS-3UTR CAA 90 bp TCCGTTCGCGCGGGGACAGCCCGTCCGCAAAGCGGGGCAGCCCGCAGGCGGCCGCCGGACTCCGACGACTaGTCCCCTCCTCCGCTGCTA +
Preference number: 5 (lower is better)
Translates to: SVRAGTARPQSGAARRRPPDSDD*SPPPLL
Trigger: TAGCAGCGGAGGAGGGGACAAGTCGTCGGAGTCCGG...CGGCCGCCTGCGGGCTGCCCCGCTTTGCGGACGGGCTGTCCCCGCGCGAACGGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS-3UTR CAA 90 bp TCCGTTCGCGCGGGGACAGCCCGTCCGCAAAGCGGGGCAGCCCGCAGGCGGCCGAGGAGGTCCGAGTTCTaGGCGCGGAGGTGCGGCTTC +
Preference number: 5 (lower is better)
Translates to: SVRAGTARPQSGAARRRPRRSEF*ARRCGF
Trigger: GAAGCCGCACCTCCGCGCCAAGAACTCGGACCTCCT...CGGCCGCCTGCGGGCTGCCCCGCTTTGCGGACGGGCTGTCCCCGCGCGAACGGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS GCA 90 bp CTGCAGCCGCTCGCCGACTTCCCCCGGCGGGCGCGTGGGTACCGCTaGTTTCCGCCGCTGTCAACAGCGCCTGGGCAGCAGGGCTCTCCT +
Preference number: 5 (lower is better)
Translates to: LQPLADFPRRARGYR*FPPLSTAPGQQGSP
Trigger: AGGAGAGCCCTGCTGCCCAGGCGCTGTTGACAGCGGCGGAAAGCAGCGGTACCCACGCGCCCGCCGGGGGAAGTCGGCGAGCGGCTGCAG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS CCA 90 bp CCGTTGACCGGCTGCGCCGCCGACGTGACGCTGGGCAGCGTGTTCTaGCTGTGCAGTTCGGCCAGGGCGCGCACGAAGCCCTCGGCGAAG +
Preference number: 5 (lower is better)
Translates to: PLTGCAADVTLGSVF*LCSSARARTKPSAK
Trigger: CTTCGCCGAGGGCTTCGTGCGCGCCCTGGCCGAACTGCACAGCCAGAACACGCTGCCCAGCGTCACGTCGGCGGCGCAGCCGGTCAACGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS GCA 90 bp ACCGAGGCTACCGCGGGAGCCACCATGCCTGCCCCGTTGACCGGCTaGGCCGCCGACGTGACGCTGGGCAGCGTGTTCTGGCTGTGCAGT +
Preference number: 5 (lower is better)
Translates to: TEATAGATMPAPLTG*AADVTLGSVFWLCS
Trigger: ACTGCACAGCCAGAACACGCTGCCCAGCGTCACGTCGGCGGCGCAGCCGGTCAACGGGGCAGGCATGGTGGCTCCCGCGGTAGCCTCGGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS GCA 90 bp CCCGCCGCCGCTGCTCAGCGCGCCTGGGTTGAAGTTGCTGAGGTTTaGGTAGACCGGCGGCTCGCTGTGCAGGCTGGCGCTGAAGCCGCC +
Preference number: 5 (lower is better)
Translates to: PAAAAQRAWVEVAEV*VDRRLAVQAGAEAA
Trigger: GGCGGCTTCAGCGCCAGCCTGCACAGCGAGCCGCCGGTCTACGCAAACCTCAGCAACTTCAACCCAGGCGCGCTGAGCAGCGGCGGCGGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS CCA 90 bp CTGTCAACAGCGCCTGGGCAGCAGGGCTCTCCTCCCGGGGGCGGCTaGAGACCAGGCTCTCTGGACACTCCCGAAACACCAGCCCGGGAG +
Preference number: 5 (lower is better)
Translates to: LSTAPGQQGSPPGGG*RPGSLDTPETPARE
Trigger: CTCCCGGGCTGGTGTTTCGGGAGTGTCCAGAGAGCCTGGTCTCCAGCCGCCCCCGGGAGGAGAGCCCTGCTGCCCAGGCGCTGTTGACAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS CCA 90 bp TTCTTTGCTGCTGCAGCCGCTCGCCGACTTCCCCCGGCGGGCGCGTaGGTACCGCTGCTTTCCGCCGCTGTCAACAGCGCCTGGGCAGCA +
Preference number: 5 (lower is better)
Translates to: FFAAAAARRLPPAGA*VPLLSAAVNSAWAA
Trigger: TGCTGCCCAGGCGCTGTTGACAGCGGCGGAAAGCAGCGGTACCCACGCGCCCGCCGGGGGAAGTCGGCGAGCGGCTGCAGCAGCAAAGAA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS-3UTR CAA 90 bp CGTTCGCGCGGGGACAGCCCGTCCGCAAAGCGGGGCAGCCCGCAGGCGGCCGCTAGACGCAGGAAAGGCTaGCAAAAGTTGGCTCCGGGA +
Preference number: 5 (lower is better)
Translates to: RSRGDSPSAKRGSPQAAARRRKG*QKLAPG
Trigger: TCCCGGAGCCAACTTTTGCAAGCCTTTCCTGCGTCT...AGCGGCCGCCTGCGGGCTGCCCCGCTTTGCGGACGGGCTGTCCCCGCGCGAACG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS-3UTR CAA 90 bp CGTTCGCGCGGGGACAGCCCGTCCGCAAAGCGGGGCAGCCCGCAGGCGGCCGCTGTGGTGATGTGCCCGTaGCTGGACTGGATTATCAGG +
Preference number: 5 (lower is better)
Translates to: RSRGDSPSAKRGSPQAAAVVMCP*LDWIIR
Trigger: CCTGATAATCCAGTCCAGCAACGGGCACATCACCAC...AGCGGCCGCCTGCGGGCTGCCCCGCTTTGCGGACGGGCTGTCCCCGCGCGAACG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS GCA 90 bp TGCCACTTGTCTCCGGTCCTCCCAGCCGGGAAAGTTCTTTGCTGCTaGAGCCGCTCGCCGACTTCCCCCGGCGGGCGCGTGGGTACCGCT +
Preference number: 5 (lower is better)
Translates to: CHLSPVLPAGKVLCC*SRSPTSPGGRVGTA
Trigger: AGCGGTACCCACGCGCCCGCCGGGGGAAGTCGGCGAGCGGCTGCAGCAGCAAAGAACTTTCCCGGCTGGGAGGACCGGAGACAAGTGGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS GCA 90 bp CTCTGCCACTTGTCTCCGGTCCTCCCAGCCGGGAAAGTTCTTTGCTaGTGCAGCCGCTCGCCGACTTCCCCCGGCGGGCGCGTGGGTACC +
Preference number: 5 (lower is better)
Translates to: LCHLSPVLPAGKVLC*CSRSPTSPGGRVGT
Trigger: GGTACCCACGCGCCCGCCGGGGGAAGTCGGCGAGCGGCTGCAGCAGCAAAGAACTTTCCCGGCTGGGAGGACCGGAGACAAGTGGCAGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS GCA 90 bp GGACTCTGCCACTTGTCTCCGGTCCTCCCAGCCGGGAAAGTTCTTTaGTGCTGCAGCCGCTCGCCGACTTCCCCCGGCGGGCGCGTGGGT +
Preference number: 5 (lower is better)
Translates to: GLCHLSPVLPAGKVL*CCSRSPTSPGGRVG
Trigger: ACCCACGCGCCCGCCGGGGGAAGTCGGCGAGCGGCTGCAGCAGCAAAGAACTTTCCCGGCTGGGAGGACCGGAGACAAGTGGCAGAGTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS GCA 90 bp CCCACGTCGGGCGAGGTGAGGAGGTCCGAGTTCTTGGCGCGGAGGTaGGGCTTCAGGCTCCCCACTGGGTCGGCCAGGTTCAGGGTCATG +
Preference number: 5 (lower is better)
Translates to: PTSGEVRRSEFLARR*GFRLPTGSARFRVM
Trigger: CATGACCCTGAACCTGGCCGACCCAGTGGGGAGCCTGAAGCCGCACCTCCGCGCCAAGAACTCGGACCTCCTCACCTCGCCCGACGTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS-3UTR CAA 90 bp CCACTCGTGCACACTGGGGGCGCCGTCAGGACGCAACCCAGTCCAACTTGGATACTGCTGCTGCTGGGGTaGCGCGGGAAAGGCCAGGCC +
Preference number: 5 (lower is better)
Translates to: PLVHTGGAVRTQPSPTWILLLLG*RGKGQA
Trigger: GGCCTGGCCTTTCCCGCGCAACCCCAGCAGCAGCAG...TATCCAAGTTGGACTGGGTTGCGTCCTGACGGCGCCCCCAGTGTGCACGAGTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS TCA 90 bp CGCGGCTCGCGCTCGCCCAAGTTCAACAACCGGTGCGAGCGAAGCTaGGCGCACGTCCTTCTTCTCTTGCGTGGCTCTCCGCCGCCTTCT +
Preference number: 5 (lower is better)
Translates to: RGSRSPKFNNRCERS*AHVLLLLRGSPPPS
Trigger: AGAAGGCGGCGGAGAGCCACGCAAGAGAAGAAGGACGTGCGCTCAGCTTCGCTCGCACCGGTTGTTGAACTTGGGCGAGCGCGAGCCGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS GCA 90 bp TCGGACTATACTGCCGACCTGGCTGGCTGGCTGTGTCTGTCTGTCTaGCTGACTCCGCGCACCTCCACTCCCGCCTCGCTGCTTCAGCCA +
Preference number: 5 (lower is better)
Translates to: SDYTADLAGWLCLSV*LTPRTSTPASLLQP
Trigger: TGGCTGAAGCAGCGAGGCGGGAGTGGAGGTGCGCGGAGTCAGGCAGACAGACAGACACAGCCAGCCAGCCAGGTCGGCAGTATAGTCCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS-3UTR CAA 90 bp TCCGTTCGCGCGGGGACAGCCCGTCCGCAAAGCGGGGCAGCCCGCAGGCGGCCGCAAACTTTGAAATGTTaGACTTCTCAGTGGGCTGTC +
Preference number: 5 (lower is better)
Translates to: SVRAGTARPQSGAARRRPQTLKC*TSQWAV
Trigger: GACAGCCCACTGAGAAGTCAAACATTTCAAAGTTTG...CGGCCGCCTGCGGGCTGCCCCGCTTTGCGGACGGGCTGTCCCCGCGCGAACGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371222.4
CDS-3UTR CAA 90 bp TCCGTTCGCGCGGGGACAGCCCGTCCGCAAAGCGGGGCAGCCCGCAGGCGGCCGCCACCAATTCCTGCTTaGAGAATAAGCACCTATTGT +
Preference number: 5 (lower is better)
Translates to: SVRAGTARPQSGAARRRPPPIPA*RISTYC
Trigger: ACAATAGGTGCTTATTCTCAAAGCAGGAATTGGTGG...CGGCCGCCTGCGGGCTGCCCCGCTTTGCGGACGGGCTGTCCCCGCGCGAACGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371222.4
CDS-3UTR CAA 90 bp CCACTCGTGCACACTGGGGGCGCCGTCAGGACGCAACCCAGTCCAACTTGGATACACGTCCTTCTTCTCTaGCGTGGCTCTCCGCCGCCT +
Preference number: 5 (lower is better)
Translates to: PLVHTGGAVRTQPSPTWIHVLLL*RGSPPP
Trigger: AGGCGGCGGAGAGCCACGCAAGAGAAGAAGGACGTG...TATCCAAGTTGGACTGGGTTGCGTCCTGACGGCGCCCCCAGTGTGCACGAGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS CCA 90 bp CAACCGGTGCGAGCGAAGCTGAGCGCACGTCCTTCTTCTCTTGCGTaGCTCTCCGCCGCCTTCTGGTCTTTACCGCCGTGGAGAAGCCTA +
Preference number: 5 (lower is better)
Translates to: QPVRAKLSARPSSLA*LSAAFWSLPPWRSL
Trigger: TAGGCTTCTCCACGGCGGTAAAGACCAGAAGGCGGCGGAGAGCCACGCAAGAGAAGAAGGACGTGCGCTCAGCTTCGCTCGCACCGGTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS-3UTR CAA 90 bp AAGAGTTCATCTGTAGGCTCAGCCTCGCTCTCACAAACCTCCCTCCTGCCGCCCCCGGACTCCGACGACTaGTCCCCTCCTCCGCTGCTA +
Preference number: 5 (lower is better)
Translates to: KSSSVGSASLSQTSLLPPPDSDD*SPPPLL
Trigger: TAGCAGCGGAGGAGGGGACAAGTCGTCGGAGTCCGG...GGGCGGCAGGAGGGAGGTTTGTGAGAGCGAGGCTGAGCCTACAGATGAACTCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS-3UTR CAA 90 bp CCACTCGTGCACACTGGGGGCGCCGTCAGGACGCAACCCAGTCCAACTTGGATAGCGCGCTACCCGGCTTaGAAAAGTCGCGGTCACTCA +
Preference number: 5 (lower is better)
Translates to: PLVHTGGAVRTQPSPTWIARYPA*KSRGHS
Trigger: TGAGTGACCGCGACTTTTCAAAGCCGGGTAGCGCGC...TATCCAAGTTGGACTGGGTTGCGTCCTGACGGCGCCCCCAGTGTGCACGAGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS-3UTR CAA 90 bp CCACTCGTGCACACTGGGGGCGCCGTCAGGACGCAACCCAGTCCAACTTGGATACTCAGCGCGCCTGGGTaGAAGTTGCTGAGGTTTGCG +
Preference number: 5 (lower is better)
Translates to: PLVHTGGAVRTQPSPTWILSAPG*KLLRFA
Trigger: CGCAAACCTCAGCAACTTCAACCCAGGCGCGCTGAG...TATCCAAGTTGGACTGGGTTGCGTCCTGACGGCGCCCCCAGTGTGCACGAGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS GCA 90 bp TCAACAACCGGTGCGAGCGAAGCTGAGCGCACGTCCTTCTTCTCTTaGGTGGCTCTCCGCCGCCTTCTGGTCTTTACCGCCGTGGAGAAG +
Preference number: 5 (lower is better)
Translates to: STTGASEAERTSFFS*VALRRLLVFTAVEK
Trigger: CTTCTCCACGGCGGTAAAGACCAGAAGGCGGCGGAGAGCCACGCAAGAGAAGAAGGACGTGCGCTCAGCTTCGCTCGCACCGGTTGTTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS GCA 90 bp CTACCCGGCTTTGAAAAGTCGCGGTCACTCACTGAGCGCTCTTCGTaGGCAGCGGTTCCTCGGAGTCCGCAGGCGAACTCACTTCCCAGA +
Preference number: 5 (lower is better)
Translates to: LPGFEKSRSLTERSS*AAVPRSPQANSLPR
Trigger: TCTGGGAAGTGAGTTCGCCTGCGGACTCCGAGGAACCGCTGCGCACGAAGAGCGCTCAGTGAGTGACCGCGACTTTTCAAAGCCGGGTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS-3UTR CAA 90 bp AAGAGTTCATCTGTAGGCTCAGCCTCGCTCTCACAAACCTCCCTCCTGCCGCCCCTCCCGCACTCTTACTaGTCGACTCGCGCGCGCTAC +
Preference number: 5 (lower is better)
Translates to: KSSSVGSASLSQTSLLPPLPHSY*STRARY
Trigger: GTAGCGCGCGCGAGTCGACAAGTAAGAGTGCGGGAG...GGGCGGCAGGAGGGAGGTTTGTGAGAGCGAGGCTGAGCCTACAGATGAACTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS-3UTR CAA 90 bp TCAATGTTAACGAAAAGTCCAACGTTCCGTTCGCGCGGGGACAGCCCGTCCGCACGCTTCCTCTCCGCCTaGATCCGCTCCTGGGACTCC +
Preference number: 5 (lower is better)
Translates to: SMLTKSPTFRSRGDSPSARFLSA*IRSWDS
Trigger: GGAGTCCCAGGAGCGGATCAAGGCGGAGAGGAAGCG...TGCGGACGGGCTGTCCCCGCGCGAACGGAACGTTGGACTTTTCGTTAACATTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS-3UTR CAA 90 bp AAGAGTTCATCTGTAGGCTCAGCCTCGCTCTCACAAACCTCCCTCCTGCCGCCCTGTTCCCTGAGCATGTaGGCCGTGGACGCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: KSSSVGSASLSQTSLLPPCSLSM*AVDASS
Trigger: GGAGCTGGCGTCCACGGCCAACATGCTCAGGGAACA...GGGCGGCAGGAGGGAGGTTTGTGAGAGCGAGGCTGAGCCTACAGATGAACTCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS GCA 90 bp GCAGTCATAGAACAGTCCGTCACTTCACGTGAGGTTAGTTTGGGCTaGGCGCACAAGTTTCGGGGCCGCAACAGGGCTGTGGCAAGCGGG +
Preference number: 5 (lower is better)
Translates to: AVIEQSVTSREVSLG*AHKFRGRNRAVASG
Trigger: CCCGCTTGCCACAGCCCTGTTGCGGCCCCGAAACTTGTGCGCGCAGCCCAAACTAACCTCACGTGAAGTGACGGACTGTTCTATGACTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS GCA 90 bp GGTGCGGCTTCAGGCTCCCCACTGGGTCGGCCAGGTTCAGGGTCATaGTCTGTTTCAGGATCTTGGGGTTACTGTAGCCATAAGGTCCGC +
Preference number: 5 (lower is better)
Translates to: GAASGSPLGRPGSGS*SVSGSWGYCSHKVR
Trigger: GCGGACCTTATGGCTACAGTAACCCCAAGATCCTGAAACAGAGCATGACCCTGAACCTGGCCGACCCAGTGGGGAGCCTGAAGCCGCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS CCA 90 bp CTGAGCGCACGTCCTTCTTCTCTTGCGTGGCTCTCCGCCGCCTTCTaGTCTTTACCGCCGTGGAGAAGCCTAAGACGCAGGAAAGGCTTG +
Preference number: 5 (lower is better)
Translates to: LSARPSSLAWLSAAF*SLPPWRSLRRRKGL
Trigger: CAAGCCTTTCCTGCGTCTTAGGCTTCTCCACGGCGGTAAAGACCAGAAGGCGGCGGAGAGCCACGCAAGAGAAGAAGGACGTGCGCTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS-3UTR CAA 90 bp TCAATGTTAACGAAAAGTCCAACGTTCCGTTCGCGCGGGGACAGCCCGTCCGCAAGCCGGGAAAGTTCTTaGCTGCTGCAGCCGCTCGCC +
Preference number: 5 (lower is better)
Translates to: SMLTKSPTFRSRGDSPSASRESS*LLQPLA
Trigger: GGCGAGCGGCTGCAGCAGCAAAGAACTTTCCCGGCT...TGCGGACGGGCTGTCCCCGCGCGAACGGAACGTTGGACTTTTCGTTAACATTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS-3UTR CAA 90 bp CCACTCGTGCACACTGGGGGCGCCGTCAGGACGCAACCCAGTCCAACTTGGATAAAAGGCTTGCAAAAGTaGGCTCCGGGACTCTGCCAC +
Preference number: 5 (lower is better)
Translates to: PLVHTGGAVRTQPSPTWIKGLQK*APGLCH
Trigger: GTGGCAGAGTCCCGGAGCCAACTTTTGCAAGCCTTT...TATCCAAGTTGGACTGGGTTGCGTCCTGACGGCGCCCCCAGTGTGCACGAGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS-3UTR CAA 90 bp TCAATGTTAACGAAAAGTCCAACGTTCCGTTCGCGCGGGGACAGCCCGTCCGCACTCCCGCACTCTTACTaGTCGACTCGCGCGCGCTAC +
Preference number: 5 (lower is better)
Translates to: SMLTKSPTFRSRGDSPSALPHSY*STRARY
Trigger: GTAGCGCGCGCGAGTCGACAAGTAAGAGTGCGGGAG...TGCGGACGGGCTGTCCCCGCGCGAACGGAACGTTGGACTTTTCGTTAACATTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS-3UTR CAA 90 bp AAGAGTTCATCTGTAGGCTCAGCCTCGCTCTCACAAACCTCCCTCCTGCCGCCCCTCAGCGCGCCTGGGTaGAAGTTGCTGAGGTTTGCG +
Preference number: 5 (lower is better)
Translates to: KSSSVGSASLSQTSLLPPLSAPG*KLLRFA
Trigger: CGCAAACCTCAGCAACTTCAACCCAGGCGCGCTGAG...GGGCGGCAGGAGGGAGGTTTGTGAGAGCGAGGCTGAGCCTACAGATGAACTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS-3UTR CAA 90 bp GTACATACACAGTTAACGAAGGCAGGCCAGAAAGAGTTCATCTGTAGGCTCAGCTCGGGCGACGCCAGCTaGAGCAGCCCCACGTCGGGC +
Preference number: 5 (lower is better)
Translates to: VHTQLTKAGQKEFICRLSSGDAS*SSPTSG
Trigger: GCCCGACGTGGGGCTGCTCAAGCTGGCGTCGCCCGA...GCTGAGCCTACAGATGAACTCTTTCTGGCCTGCCTTCGTTAACTGTGTATGTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371222.4
CDS GCA 90 bp AGCCTAAGACGCAGGAAAGGCTTGCAAAAGTTGGCTCCGGGACTCTaGCACTTGTCTCCGGTCCTCCCAGCCGGGAAAGTTCTTTGCTGC +
Preference number: 5 (lower is better)
Translates to: SLRRRKGLQKLAPGL*HLSPVLPAGKVLCC
Trigger: GCAGCAAAGAACTTTCCCGGCTGGGAGGACCGGAGACAAGTGGCAGAGTCCCGGAGCCAACTTTTGCAAGCCTTTCCTGCGTCTTAGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS CCA 90 bp TCTTCTCTTGCGTGGCTCTCCGCCGCCTTCTGGTCTTTACCGCCGTaGAGAAGCCTAAGACGCAGGAAAGGCTTGCAAAAGTTGGCTCCG +
Preference number: 5 (lower is better)
Translates to: SSLAWLSAAFWSLPP*RSLRRRKGLQKLAP
Trigger: CGGAGCCAACTTTTGCAAGCCTTTCCTGCGTCTTAGGCTTCTCCACGGCGGTAAAGACCAGAAGGCGGCGGAGAGCCACGCAAGAGAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS-3UTR CAA 90 bp AAGTCCTTCCCACTCGTGCACACTGGGGGCGCCGTCAGGACGCAACCCAGTCCAAGGGAAGGCATCCTGTaGCTTTCACTCTTCTGTGTT +
Preference number: 5 (lower is better)
Translates to: KSFPLVHTGGAVRTQPSPREGIL*LSLFCV
Trigger: AACACAGAAGAGTGAAAGCAACAGGATGCCTTCCCT...TGGACTGGGTTGCGTCCTGACGGCGCCCCCAGTGTGCACGAGTGGGAAGGACTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000678696.1
CDS-3UTR CAA 90 bp GGAAGGCATCCTGTTGCTTTCACTCTTCTGTGTTCCTGGTTTCTAGCTTCTTCTCTGCTGCTGCTGGGGTaGCGCGGGAAAGGCCAGGCC +
Preference number: 5 (lower is better)
Translates to: GRHPVAFTLLCSWFLASSLLLLG*RGKGQA
Trigger: GGCCTGGCCTTTCCCGCGCAACCCCAGCAGCAGCAG...AGAAGAAGCTAGAAACCAGGAACACAGAAGAGTGAAAGCAACAGGATGCCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678696.1
CDS-3UTR CAA 90 bp TCAATGTTAACGAAAAGTCCAACGTTCCGTTCGCGCGGGGACAGCCCGTCCGCATTCCTTTTTCGGCACTaGGAGGCAGCGATGCGGTTC +
Preference number: 5 (lower is better)
Translates to: SMLTKSPTFRSRGDSPSAFLFRH*EAAMRF
Trigger: GAACCGCATCGCTGCCTCCAAGTGCCGAAAAAGGAA...TGCGGACGGGCTGTCCCCGCGCGAACGGAACGTTGGACTTTTCGTTAACATTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS-3UTR CAA 90 bp AAGTCCTTCCCACTCGTGCACACTGGGGGCGCCGTCAGGACGCAACCCAGTCCAAATCTACAGTCTCTATaGCAGTTTGTAACCCCCTCC +
Preference number: 5 (lower is better)
Translates to: KSFPLVHTGGAVRTQPSPNLQSL*QFVTPS
Trigger: GGAGGGGGTTACAAACTGCAATAGAGACTGTAGATT...TGGACTGGGTTGCGTCCTGACGGCGCCCCCAGTGTGCACGAGTGGGAAGGACTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS-3UTR CAA 90 bp ACTTTGAGGGTTGATCCATCACGAGTTATGCACACAGTTAACGAAGGCAGGCCAAGCCGGGAAAGTTCTTaGCTGCTGCAGCCGCTCGCC +
Preference number: 5 (lower is better)
Translates to: TLRVDPSRVMHTVNEGRPSRESS*LLQPLA
Trigger: GGCGAGCGGCTGCAGCAGCAAAGAACTTTCCCGGCT...TGGCCTGCCTTCGTTAACTGTGTGCATAACTCGTGATGGATCAACCCTCAAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678696.1
CDS-3UTR CAA 90 bp GGAAGGCATCCTGTTGCTTTCACTCTTCTGTGTTCCTGGTTTCTAGCTTCTTCTCGCTTCCTCTCCGCCTaGATCCGCTCCTGGGACTCC +
Preference number: 5 (lower is better)
Translates to: GRHPVAFTLLCSWFLASSRFLSA*IRSWDS
Trigger: GGAGTCCCAGGAGCGGATCAAGGCGGAGAGGAAGCG...AGAAGAAGCTAGAAACCAGGAACACAGAAGAGTGAAAGCAACAGGATGCCTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678696.1
CDS-3UTR CAA 90 bp TCAATGTTAACGAAAAGTCCAACGTTCCGTTCGCGCGGGGACAGCCCGTCCGCATTGGCCAGGTTGACTTaGAGGGTTGATCCATCACGA +
Preference number: 5 (lower is better)
Translates to: SMLTKSPTFRSRGDSPSALARLT*RVDPSR
Trigger: TCGTGATGGATCAACCCTCAAAGTCAACCTGGCCAA...TGCGGACGGGCTGTCCCCGCGCGAACGGAACGTTGGACTTTTCGTTAACATTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678696.1
CDS-3UTR CAA 90 bp TATTATGTCCCCACTCTGTTTCAAATTCACCTGCTTTCTCCGTCACCTGCATTACCGGGACTCTGCCACTaGTCTCCGGTCCTCCCAGCC +
Preference number: 5 (lower is better)
Translates to: YYVPTLFQIHLLSPSPALPGLCH*SPVLPA
Trigger: GGCTGGGAGGACCGGAGACAAGTGGCAGAGTCCCGG...TAATGCAGGTGACGGAGAAAGCAGGTGAATTTGAAACAGAGTGGGGACATAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678696.1
CDS-3UTR CAA 90 bp CATCACGAGTTATGCACACAGTTAACGAAGGCAGGCCAGAAAGAGTTCATCTGTTGTTCCCTGAGCATGTaGGCCGTGGACGCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: HHELCTQLTKAGQKEFICCSLSM*AVDASS
Trigger: GGAGCTGGCGTCCACGGCCAACATGCTCAGGGAACA...ACAGATGAACTCTTTCTGGCCTGCCTTCGTTAACTGTGTGCATAACTCGTGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678696.1
CDS TCA 90 bp AGCCCGGGAGCCACAGGCGCTAGCTCTGGGCAGTTAGAGAGAAGGTaGAAAGAAAATAAGATTTGCAGTTCGGACTATACTGCCGACCTG +
Preference number: 5 (lower is better)
Translates to: SPGATGASSGQLERR*KENKICSSDYTADL
Trigger: CAGGTCGGCAGTATAGTCCGAACTGCAAATCTTATTTTCTTTTCACCTTCTCTCTAACTGCCCAGAGCTAGCGCCTGTGGCTCCCGGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS-3UTR CAA 90 bp TATTATGTCCCCACTCTGTTTCAAATTCACCTGCTTTCTCCGTCACCTGCATTACACGTCCTTCTTCTCTaGCGTGGCTCTCCGCCGCCT +
Preference number: 5 (lower is better)
Translates to: YYVPTLFQIHLLSPSPALHVLLL*RGSPPP
Trigger: AGGCGGCGGAGAGCCACGCAAGAGAAGAAGGACGTG...TAATGCAGGTGACGGAGAAAGCAGGTGAATTTGAAACAGAGTGGGGACATAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678696.1
CDS-3UTR CAA 90 bp TCGAATGTTAGGTCCATGCAGTTCTTGGTCAATGTTAACGAAAAGTCCAACGTTAGGAGGTCCGAGTTCTaGGCGCGGAGGTGCGGCTTC +
Preference number: 5 (lower is better)
Translates to: SNVRSMQFLVNVNEKSNVRRSEF*ARRCGF
Trigger: GAAGCCGCACCTCCGCGCCAAGAACTCGGACCTCCT...AACGTTGGACTTTTCGTTAACATTGACCAAGAACTGCATGGACCTAACATTCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS-3UTR CAA 90 bp GCTAACAGCTTAATTCTTTTAAGAACACTCACTAAGTACTGGGCTTTAGAACTTTCGGGCGACGCCAGCTaGAGCAGCCCCACGTCGGGC +
Preference number: 5 (lower is better)
Translates to: ANSLILLRTLTKYWALELSGDAS*SSPTSG
Trigger: GCCCGACGTGGGGCTGCTCAAGCTGGCGTCGCCCGA...AAGTTCTAAAGCCCAGTACTTAGTGAGTGTTCTTAAAAGAATTAAGCTGTTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678696.1
CDS-3UTR CAA 90 bp GTACATACACAGTTAACGAAGGCAGGCCAGAAAGAGTTCATCTGTAGGCTCAGCTCATCTGTCACGTTCTaGGGGCACAGGAACTGGGTG +
Preference number: 5 (lower is better)
Translates to: VHTQLTKAGQKEFICRLSSSVTF*GHRNWV
Trigger: CACCCAGTTCCTGTGCCCCAAGAACGTGACAGATGA...GCTGAGCCTACAGATGAACTCTTTCTGGCCTGCCTTCGTTAACTGTGTATGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371222.4
CDS-3UTR CAA 90 bp TATTATGTCCCCACTCTGTTTCAAATTCACCTGCTTTCTCCGTCACCTGCATTAGCGCGCTACCCGGCTTaGAAAAGTCGCGGTCACTCA +
Preference number: 5 (lower is better)
Translates to: YYVPTLFQIHLLSPSPALARYPA*KSRGHS
Trigger: TGAGTGACCGCGACTTTTCAAAGCCGGGTAGCGCGC...TAATGCAGGTGACGGAGAAAGCAGGTGAATTTGAAACAGAGTGGGGACATAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678696.1
CDS-3UTR CAA 90 bp TTATGCACACAGTTAACGAAGGCAGGCCAGAAAGAGTTCATCTGTAGGCTCAGCTCACGTGAGGTTAGTTaGGGCTGCGCGCACAAGTTT +
Preference number: 5 (lower is better)
Translates to: LCTQLTKAGQKEFICRLSSREVS*GCAHKF
Trigger: AAACTTGTGCGCGCAGCCCAAACTAACCTCACGTGA...GCTGAGCCTACAGATGAACTCTTTCTGGCCTGCCTTCGTTAACTGTGTGCATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678696.1
CDS-3UTR CAA 90 bp GGAAGGCATCCTGTTGCTTTCACTCTTCTGTGTTCCTGGTTTCTAGCTTCTTCTTTCCTTTTTCGGCACTaGGAGGCAGCGATGCGGTTC +
Preference number: 5 (lower is better)
Translates to: GRHPVAFTLLCSWFLASSFLFRH*EAAMRF
Trigger: GAACCGCATCGCTGCCTCCAAGTGCCGAAAAAGGAA...AGAAGAAGCTAGAAACCAGGAACACAGAAGAGTGAAAGCAACAGGATGCCTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000678696.1
CDS-3UTR CAA 90 bp GTACATACACAGTTAACGAAGGCAGGCCAGAAAGAGTTCATCTGTAGGCTCAGCCCAACTTGGATACCCTaGGCTTTAGTTCTCGGACAC +
Preference number: 5 (lower is better)
Translates to: VHTQLTKAGQKEFICRLSPTWIP*ALVLGH
Trigger: GTGTCCGAGAACTAAAGCCAAGGGTATCCAAGTTGG...GCTGAGCCTACAGATGAACTCTTTCTGGCCTGCCTTCGTTAACTGTGTATGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371222.4
CDS-3UTR CAA 90 bp CATGAGGGAAGGCATCCTGTTGCTTTCACTCTTCTGTGTTCCTGGTTTCTAGCTCCAACTTGGATACCCTaGGCTTTAGTTCTCGGACAC +
Preference number: 5 (lower is better)
Translates to: HEGRHPVAFTLLCSWFLAPTWIP*ALVLGH
Trigger: GTGTCCGAGAACTAAAGCCAAGGGTATCCAAGTTGG...AGCTAGAAACCAGGAACACAGAAGAGTGAAAGCAACAGGATGCCTTCCCTCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678696.1
CDS-3UTR CAA 90 bp TATTATGTCCCCACTCTGTTTCAAATTCACCTGCTTTCTCCGTCACCTGCATTATCATCTGTCACGTTCTaGGGGCACAGGAACTGGGTG +
Preference number: 5 (lower is better)
Translates to: YYVPTLFQIHLLSPSPALSSVTF*GHRNWV
Trigger: CACCCAGTTCCTGTGCCCCAAGAACGTGACAGATGA...TAATGCAGGTGACGGAGAAAGCAGGTGAATTTGAAACAGAGTGGGGACATAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678696.1
CDS-3UTR CAA 90 bp GTACATACACAGTTAACGAAGGCAGGCCAGAAAGAGTTCATCTGTAGGCTCAGCTCTCTCCGTCGCAACTaGTCAAGTTCTCAAGTCTGT +
Preference number: 5 (lower is better)
Translates to: VHTQLTKAGQKEFICRLSSLRRN*SSSQVC
Trigger: ACAGACTTGAGAACTTGACAAGTTGCGACGGAGAGA...GCTGAGCCTACAGATGAACTCTTTCTGGCCTGCCTTCGTTAACTGTGTATGTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371222.4
CDS-3UTR CAA 90 bp CATGAGGGAAGGCATCCTGTTGCTTTCACTCTTCTGTGTTCCTGGTTTCTAGCTTCTCTCCGTCGCAACTaGTCAAGTTCTCAAGTCTGT +
Preference number: 5 (lower is better)
Translates to: HEGRHPVAFTLLCSWFLASLRRN*SSSQVC
Trigger: ACAGACTTGAGAACTTGACAAGTTGCGACGGAGAGA...AGCTAGAAACCAGGAACACAGAAGAGTGAAAGCAACAGGATGCCTTCCCTCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678696.1
CDS-3UTR CAA 90 bp TCGAATGTTAGGTCCATGCAGTTCTTGGTCAATGTTAACGAAAAGTCCAACGTTGTGGTGATGTGCCCGTaGCTGGACTGGATTATCAGG +
Preference number: 5 (lower is better)
Translates to: SNVRSMQFLVNVNEKSNVVVMCP*LDWIIR
Trigger: CCTGATAATCCAGTCCAGCAACGGGCACATCACCAC...AACGTTGGACTTTTCGTTAACATTGACCAAGAACTGCATGGACCTAACATTCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS-3UTR CAA 90 bp ACTTTGAGGGTTGATCCATCACGAGTTATGCACACAGTTAACGAAGGCAGGCCAAATCTACAGTCTCTATaGCAGTTTGTAACCCCCTCC +
Preference number: 5 (lower is better)
Translates to: TLRVDPSRVMHTVNEGRPNLQSL*QFVTPS
Trigger: GGAGGGGGTTACAAACTGCAATAGAGACTGTAGATT...TGGCCTGCCTTCGTTAACTGTGTGCATAACTCGTGATGGATCAACCCTCAAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000678696.1
CDS CCA 90 bp ACGGTCTCTCTTCAAAATGTTTGCAACTGCTGCGTTAGCATGAGTTaGCACCCACTGTTAACGTGGTTCATGACTTTCTGTTTAAGCTGT +
Preference number: 5 (lower is better)
Translates to: TVSLQNVCNCCVSMS*HPLLTWFMTFCLSC
Trigger: ACAGCTTAAACAGAAAGTCATGAACCACGTTAACAGTGGGTGCCAACTCATGCTAACGCAGCAGTTGCAAACATTTTGAAGAGAGACCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS-3UTR CAA 90 bp GGAAGGCATCCTGTTGCTTTCACTCTTCTGTGTTCCTGGTTTCTAGCTTCTTCTAGGTCCATGCAGTTCTaGGTCAATGTTAACGAAAAG +
Preference number: 5 (lower is better)
Translates to: GRHPVAFTLLCSWFLASSRSMQF*VNVNEK
Trigger: CTTTTCGTTAACATTGACCAAGAACTGCATGGACCT...AGAAGAAGCTAGAAACCAGGAACACAGAAGAGTGAAAGCAACAGGATGCCTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678696.1
CDS-3UTR CAA 90 bp GCTAACAGCTTAATTCTTTTAAGAACACTCACTAAGTACTGGGCTTTAGAACTTAGACGCAGGAAAGGCTaGCAAAAGTTGGCTCCGGGA +
Preference number: 5 (lower is better)
Translates to: ANSLILLRTLTKYWALELRRRKG*QKLAPG
Trigger: TCCCGGAGCCAACTTTTGCAAGCCTTTCCTGCGTCT...AAGTTCTAAAGCCCAGTACTTAGTGAGTGTTCTTAAAAGAATTAAGCTGTTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678696.1
CDS-3UTR CAA 90 bp AAATGGTCACAGCACATGCCACTTGATACAATCCAAACTTTGAAATGTTTGACTTCACGTGAGGTTAGTTaGGGCTGCGCGCACAAGTTT +
Preference number: 5 (lower is better)
Translates to: KWSQHMPLDTIQTLKCLTSREVS*GCAHKF
Trigger: AAACTTGTGCGCGCAGCCCAAACTAACCTCACGTGA...AGTCAAACATTTCAAAGTTTGGATTGTATCAAGTGGCATGTGCTGTGACCATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371222.4
CDS-3UTR CAA 90 bp AAATGGTCACAGCACATGCCACTTGATACAATCCAAACTTTGAAATGTTTGACTAGGTCCATGCAGTTCTaGGTCAATGTTAACGAAAAG +
Preference number: 5 (lower is better)
Translates to: KWSQHMPLDTIQTLKCLTRSMQF*VNVNEK
Trigger: CTTTTCGTTAACATTGACCAAGAACTGCATGGACCT...AGTCAAACATTTCAAAGTTTGGATTGTATCAAGTGGCATGTGCTGTGACCATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371222.4
CDS GCA 72 bp AGCGGCTCTCCCCGCGGAGCGGATCAGTGCGGACCCTaGAGTGGCCGGCCGGCGGCGGGTCTTGGCCGCCCG +
Preference number: 6 (lower is better)
Translates to: SGSPRGADQCGP*SGRPAAGLGRP
Trigger: CGGGCGGCCAAGACCCGCCGCCGGCCGGCCACTGCAGGGTCCGCACTGATCCGCTCCGCGGGGAGAGCCGCT
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS CCA 72 bp CTCTCCCCGCGGAGCGGATCAGTGCGGACCCTGCAGTaGCCGGCCGGCGGCGGGTCTTGGCCGCCCGGACTC +
Preference number: 6 (lower is better)
Translates to: LSPRSGSVRTLQ*PAGGGSWPPGL
Trigger: GAGTCCGGGCGGCCAAGACCCGCCGCCGGCCGGCCACTGCAGGGTCCGCACTGATCCGCTCCGCGGGGAGAG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS GCA 72 bp TCCCAGAGCAGCGGCTCTCCCCGCGGAGCGGATCAGTaGGGACCCTGCAGTGGCCGGCCGGCGGCGGGTCTT +
Preference number: 6 (lower is better)
Translates to: SQSSGSPRGADQ*GPCSGRPAAGL
Trigger: AAGACCCGCCGCCGGCCGGCCACTGCAGGGTCCGCACTGATCCGCTCCGCGGGGAGAGCCGCTGCTCTGGGA
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS GCA 72 bp CCCTGCCACCGAGGCTACCGCGGGAGCCACCATGCCTaGCCCGTTGACCGGCTGCGCCGCCGACGTGACGCT +
Preference number: 6 (lower is better)
Translates to: PCHRGYRGSHHA*PVDRLRRRRDA
Trigger: AGCGTCACGTCGGCGGCGCAGCCGGTCAACGGGGCAGGCATGGTGGCTCCCGCGGTAGCCTCGGTGGCAGGG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS CCA 72 bp GCTGCAGCCGCTCGCCGACTTCCCCCGGCGGGCGCGTaGGTACCGCTGCTTTCCGCCGCTGTCAACAGCGCC +
Preference number: 6 (lower is better)
Translates to: AAAARRLPPAGA*VPLLSAAVNSA
Trigger: GGCGCTGTTGACAGCGGCGGAAAGCAGCGGTACCCACGCGCCCGCCGGGGGAAGTCGGCGAGCGGCTGCAGC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS CAA 90 bp CCCCCTGCCACCGAGGCTACCGCGGGAGCCACCATGCCTGCCCCGTaGACCGGCTGCGCCGCCGACGTGACGCTGGGCAGCGTGTTCTGG +
Preference number: 6 (lower is better)
Translates to: PPATEATAGATMPAP*TGCAADVTLGSVFW
Trigger: CCAGAACACGCTGCCCAGCGTCACGTCGGCGGCGCAGCCGGTCAACGGGGCAGGCATGGTGGCTCCCGCGGTAGCCTCGGTGGCAGGGGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS GCA 72 bp CTCGCCGACTTCCCCCGGCGGGCGCGTGGGTACCGCTaGTTTCCGCCGCTGTCAACAGCGCCTGGGCAGCAG +
Preference number: 6 (lower is better)
Translates to: LADFPRRARGYR*FPPLSTAPGQQ
Trigger: CTGCTGCCCAGGCGCTGTTGACAGCGGCGGAAAGCAGCGGTACCCACGCGCCCGCCGGGGGAAGTCGGCGAG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS GCA 72 bp GCCGCCGACGTGACGCTGGGCAGCGTGTTCTGGCTGTaGAGTTCGGCCAGGGCGCGCACGAAGCCCTCGGCG +
Preference number: 6 (lower is better)
Translates to: AADVTLGSVFWL*SSARARTKPSA
Trigger: CGCCGAGGGCTTCGTGCGCGCCCTGGCCGAACTGCACAGCCAGAACACGCTGCCCAGCGTCACGTCGGCGGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS CCA 72 bp GGCTGCGCCGCCGACGTGACGCTGGGCAGCGTGTTCTaGCTGTGCAGTTCGGCCAGGGCGCGCACGAAGCCC +
Preference number: 6 (lower is better)
Translates to: GCAADVTLGSVF*LCSSARARTKP
Trigger: GGGCTTCGTGCGCGCCCTGGCCGAACTGCACAGCCAGAACACGCTGCCCAGCGTCACGTCGGCGGCGCAGCC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS GCA 72 bp TCTCCGGTCCTCCCAGCCGGGAAAGTTCTTTGCTGCTaGAGCCGCTCGCCGACTTCCCCCGGCGGGCGCGTG +
Preference number: 6 (lower is better)
Translates to: SPVLPAGKVLCC*SRSPTSPGGRV
Trigger: CACGCGCCCGCCGGGGGAAGTCGGCGAGCGGCTGCAGCAGCAAAGAACTTTCCCGGCTGGGAGGACCGGAGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS CCA 72 bp GCTCTCCTCCCGGGGGCGGCTGGAGACCAGGCTCTCTaGACACTCCCGAAACACCAGCCCGGGAGCCACAGG +
Preference number: 6 (lower is better)
Translates to: ALLPGAAGDQAL*TLPKHQPGSHR
Trigger: CCTGTGGCTCCCGGGCTGGTGTTTCGGGAGTGTCCAGAGAGCCTGGTCTCCAGCCGCCCCCGGGAGGAGAGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS CCA 72 bp GTAGGAGGGCGCCCCGCCGCCGCTGCTCAGCGCGCCTaGGTTGAAGTTGCTGAGGTTTGCGTAGACCGGCGG +
Preference number: 6 (lower is better)
Translates to: VGGRPAAAAQRA*VEVAEVCVDRR
Trigger: CCGCCGGTCTACGCAAACCTCAGCAACTTCAACCCAGGCGCGCTGAGCAGCGGCGGCGGGGCGCCCTCCTAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS CAA 72 bp AGCCCCACGTCGGGCGAGGTGAGGAGGTCCGAGTTCTaGGCGCGGAGGTGCGGCTTCAGGCTCCCCACTGGG +
Preference number: 6 (lower is better)
Translates to: SPTSGEVRRSEF*ARRCGFRLPTG
Trigger: CCCAGTGGGGAGCCTGAAGCCGCACCTCCGCGCCAAGAACTCGGACCTCCTCACCTCGCCCGACGTGGGGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS CAA 90 bp GGGACTCTGCCACTTGTCTCCGGTCCTCCCAGCCGGGAAAGTTCTTaGCTGCTGCAGCCGCTCGCCGACTTCCCCCGGCGGGCGCGTGGG +
Preference number: 6 (lower is better)
Translates to: GTLPLVSGPPSRESS*LLQPLADFPRRARG
Trigger: CCCACGCGCCCGCCGGGGGAAGTCGGCGAGCGGCTGCAGCAGCAAAGAACTTTCCCGGCTGGGAGGACCGGAGACAAGTGGCAGAGTCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS CAA 90 bp AGCTTGAGCAGCCCCACGTCGGGCGAGGTGAGGAGGTCCGAGTTCTaGGCGCGGAGGTGCGGCTTCAGGCTCCCCACTGGGTCGGCCAGG +
Preference number: 6 (lower is better)
Translates to: SLSSPTSGEVRRSEF*ARRCGFRLPTGSAR
Trigger: CCTGGCCGACCCAGTGGGGAGCCTGAAGCCGCACCTCCGCGCCAAGAACTCGGACCTCCTCACCTCGCCCGACGTGGGGCTGCTCAAGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS GCA 72 bp TTGTCTCCGGTCCTCCCAGCCGGGAAAGTTCTTTGCTaGTGCAGCCGCTCGCCGACTTCCCCCGGCGGGCGC +
Preference number: 6 (lower is better)
Translates to: LSPVLPAGKVLC*CSRSPTSPGGR
Trigger: GCGCCCGCCGGGGGAAGTCGGCGAGCGGCTGCAGCAGCAAAGAACTTTCCCGGCTGGGAGGACCGGAGACAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS GCA 72 bp GGCGAGGTGAGGAGGTCCGAGTTCTTGGCGCGGAGGTaGGGCTTCAGGCTCCCCACTGGGTCGGCCAGGTTC +
Preference number: 6 (lower is better)
Translates to: GEVRRSEFLARR*GFRLPTGSARF
Trigger: GAACCTGGCCGACCCAGTGGGGAGCCTGAAGCCGCACCTCCGCGCCAAGAACTCGGACCTCCTCACCTCGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS GCA 72 bp CACTTGTCTCCGGTCCTCCCAGCCGGGAAAGTTCTTTaGTGCTGCAGCCGCTCGCCGACTTCCCCCGGCGGG +
Preference number: 6 (lower is better)
Translates to: HLSPVLPAGKVL*CCSRSPTSPGG
Trigger: CCCGCCGGGGGAAGTCGGCGAGCGGCTGCAGCAGCAAAGAACTTTCCCGGCTGGGAGGACCGGAGACAAGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS CAA 72 bp CCACTTGTCTCCGGTCCTCCCAGCCGGGAAAGTTCTTaGCTGCTGCAGCCGCTCGCCGACTTCCCCCGGCGG +
Preference number: 6 (lower is better)
Translates to: PLVSGPPSRESS*LLQPLADFPRR
Trigger: CCGCCGGGGGAAGTCGGCGAGCGGCTGCAGCAGCAAAGAACTTTCCCGGCTGGGAGGACCGGAGACAAGTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS GCA 72 bp GCTGCTCAGCGCGCCTGGGTTGAAGTTGCTGAGGTTTaGGTAGACCGGCGGCTCGCTGTGCAGGCTGGCGCT +
Preference number: 6 (lower is better)
Translates to: AAQRAWVEVAEV*VDRRLAVQAGA
Trigger: AGCGCCAGCCTGCACAGCGAGCCGCCGGTCTACGCAAACCTCAGCAACTTCAACCCAGGCGCGCTGAGCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS CAA 90 bp TTGCTGGACTGGATTATCAGGCGCTCCAGCTCGGGCGACGCCAGCTaGAGCAGCCCCACGTCGGGCGAGGTGAGGAGGTCCGAGTTCTTG +
Preference number: 6 (lower is better)
Translates to: LLDWIIRRSSSGDAS*SSPTSGEVRRSEFL
Trigger: CAAGAACTCGGACCTCCTCACCTCGCCCGACGTGGGGCTGCTCAAGCTGGCGTCGCCCGAGCTGGAGCGCCTGATAATCCAGTCCAGCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS GCA 72 bp GGTGCGAGCGAAGCTGAGCGCACGTCCTTCTTCTCTTaGGTGGCTCTCCGCCGCCTTCTGGTCTTTACCGCC +
Preference number: 6 (lower is better)
Translates to: GASEAERTSFFS*VALRRLLVFTA
Trigger: GGCGGTAAAGACCAGAAGGCGGCGGAGAGCCACGCAAGAGAAGAAGGACGTGCGCTCAGCTTCGCTCGCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS CCA 72 bp CGAGCGAAGCTGAGCGCACGTCCTTCTTCTCTTGCGTaGCTCTCCGCCGCCTTCTGGTCTTTACCGCCGTGG +
Preference number: 6 (lower is better)
Translates to: RAKLSARPSSLA*LSAAFWSLPPW
Trigger: CCACGGCGGTAAAGACCAGAAGGCGGCGGAGAGCCACGCAAGAGAAGAAGGACGTGCGCTCAGCTTCGCTCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS CCA 72 bp GTTCTTGGCGCGGAGGTGCGGCTTCAGGCTCCCCACTaGGTCGGCCAGGTTCAGGGTCATGCTCTGTTTCAG +
Preference number: 6 (lower is better)
Translates to: VLGAEVRLQAPH*VGQVQGHALFQ
Trigger: CTGAAACAGAGCATGACCCTGAACCTGGCCGACCCAGTGGGGAGCCTGAAGCCGCACCTCCGCGCCAAGAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS CAA 90 bp TGCCTCCCGCACTCTTACTTGTCGACTCGCGCGCGCTACCCGGCTTaGAAAAGTCGCGGTCACTCACTGAGCGCTCTTCGTGCGCAGCGG +
Preference number: 6 (lower is better)
Translates to: CLPHSYLSTRARYPA*KSRGHSLSALRAQR
Trigger: CCGCTGCGCACGAAGAGCGCTCAGTGAGTGACCGCGACTTTTCAAAGCCGGGTAGCGCGCGCGAGTCGACAAGTAAGAGTGCGGGAGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS TCA 72 bp CGCTCGCCCAAGTTCAACAACCGGTGCGAGCGAAGCTaGGCGCACGTCCTTCTTCTCTTGCGTGGCTCTCCG +
Preference number: 6 (lower is better)
Translates to: RSPKFNNRCERS*AHVLLLLRGSP
Trigger: CGGAGAGCCACGCAAGAGAAGAAGGACGTGCGCTCAGCTTCGCTCGCACCGGTTGTTGAACTTGGGCGAGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS CAA 90 bp TTACCGCCGTGGAGAAGCCTAAGACGCAGGAAAGGCTTGCAAAAGTaGGCTCCGGGACTCTGCCACTTGTCTCCGGTCCTCCCAGCCGGG +
Preference number: 6 (lower is better)
Translates to: LPPWRSLRRRKGLQK*APGLCHLSPVLPAG
Trigger: CCCGGCTGGGAGGACCGGAGACAAGTGGCAGAGTCCCGGAGCCAACTTTTGCAAGCCTTTCCTGCGTCTTAGGCTTCTCCACGGCGGTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS CCA 72 bp CGTCCTTCTTCTCTTGCGTGGCTCTCCGCCGCCTTCTaGTCTTTACCGCCGTGGAGAAGCCTAAGACGCAGG +
Preference number: 6 (lower is better)
Translates to: RPSSLAWLSAAF*SLPPWRSLRRR
Trigger: CCTGCGTCTTAGGCTTCTCCACGGCGGTAAAGACCAGAAGGCGGCGGAGAGCCACGCAAGAGAAGAAGGACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS GCA 72 bp CGCAGGAAAGGCTTGCAAAAGTTGGCTCCGGGACTCTaGCACTTGTCTCCGGTCCTCCCAGCCGGGAAAGTT +
Preference number: 6 (lower is better)
Translates to: RRKGLQKLAPGL*HLSPVLPAGKV
Trigger: AACTTTCCCGGCTGGGAGGACCGGAGACAAGTGGCAGAGTCCCGGAGCCAACTTTTGCAAGCCTTTCCTGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS GCA 72 bp TTTGAAAAGTCGCGGTCACTCACTGAGCGCTCTTCGTaGGCAGCGGTTCCTCGGAGTCCGCAGGCGAACTCA +
Preference number: 6 (lower is better)
Translates to: FEKSRSLTERSS*AAVPRSPQANS
Trigger: TGAGTTCGCCTGCGGACTCCGAGGAACCGCTGCGCACGAAGAGCGCTCAGTGAGTGACCGCGACTTTTCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS GCA 72 bp GAACAGTCCGTCACTTCACGTGAGGTTAGTTTGGGCTaGGCGCACAAGTTTCGGGGCCGCAACAGGGCTGTG +
Preference number: 6 (lower is better)
Translates to: EQSVTSREVSLG*AHKFRGRNRAV
Trigger: CACAGCCCTGTTGCGGCCCCGAAACTTGTGCGCGCAGCCCAAACTAACCTCACGTGAAGTGACGGACTGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS CCA 72 bp GCGTGGCTCTCCGCCGCCTTCTGGTCTTTACCGCCGTaGAGAAGCCTAAGACGCAGGAAAGGCTTGCAAAAG +
Preference number: 6 (lower is better)
Translates to: AWLSAAFWSLPP*RSLRRRKGLQK
Trigger: CTTTTGCAAGCCTTTCCTGCGTCTTAGGCTTCTCCACGGCGGTAAAGACCAGAAGGCGGCGGAGAGCCACGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS CAA 90 bp AGACGCAGGAAAGGCTTGCAAAAGTTGGCTCCGGGACTCTGCCACTaGTCTCCGGTCCTCCCAGCCGGGAAAGTTCTTTGCTGCTGCAGC +
Preference number: 6 (lower is better)
Translates to: RRRKGLQKLAPGLCH*SPVLPAGKVLCCCS
Trigger: GCTGCAGCAGCAAAGAACTTTCCCGGCTGGGAGGACCGGAGACAAGTGGCAGAGTCCCGGAGCCAACTTTTGCAAGCCTTTCCTGCGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS CAA 72 bp CACTCTTACTTGTCGACTCGCGCGCGCTACCCGGCTTaGAAAAGTCGCGGTCACTCACTGAGCGCTCTTCGT +
Preference number: 6 (lower is better)
Translates to: HSYLSTRARYPA*KSRGHSLSALR
Trigger: ACGAAGAGCGCTCAGTGAGTGACCGCGACTTTTCAAAGCCGGGTAGCGCGCGCGAGTCGACAAGTAAGAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS CAA 90 bp TTCTGGTCTTTACCGCCGTGGAGAAGCCTAAGACGCAGGAAAGGCTaGCAAAAGTTGGCTCCGGGACTCTGCCACTTGTCTCCGGTCCTC +
Preference number: 6 (lower is better)
Translates to: FWSLPPWRSLRRRKG*QKLAPGLCHLSPVL
Trigger: GAGGACCGGAGACAAGTGGCAGAGTCCCGGAGCCAACTTTTGCAAGCCTTTCCTGCGTCTTAGGCTTCTCCACGGCGGTAAAGACCAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS CAA 72 bp AAAGGCTTGCAAAAGTTGGCTCCGGGACTCTGCCACTaGTCTCCGGTCCTCCCAGCCGGGAAAGTTCTTTGC +
Preference number: 6 (lower is better)
Translates to: KGLQKLAPGLCH*SPVLPAGKVLC
Trigger: GCAAAGAACTTTCCCGGCTGGGAGGACCGGAGACAAGTGGCAGAGTCCCGGAGCCAACTTTTGCAAGCCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS CAA 72 bp TGGAGAAGCCTAAGACGCAGGAAAGGCTTGCAAAAGTaGGCTCCGGGACTCTGCCACTTGTCTCCGGTCCTC +
Preference number: 6 (lower is better)
Translates to: WRSLRRRKGLQK*APGLCHLSPVL
Trigger: GAGGACCGGAGACAAGTGGCAGAGTCCCGGAGCCAACTTTTGCAAGCCTTTCCTGCGTCTTAGGCTTCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS CAA 72 bp GTCATAGAACAGTCCGTCACTTCACGTGAGGTTAGTTaGGGCTGCGCGCACAAGTTTCGGGGCCGCAACAGG +
Preference number: 6 (lower is better)
Translates to: VIEQSVTSREVS*GCAHKFRGRNR
Trigger: CCTGTTGCGGCCCCGAAACTTGTGCGCGCAGCCCAAACTAACCTCACGTGAAGTGACGGACTGTTCTATGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS CAA 90 bp ATCTTTGCAGTCATAGAACAGTCCGTCACTTCACGTGAGGTTAGTTaGGGCTGCGCGCACAAGTTTCGGGGCCGCAACAGGGCTGTGGCA +
Preference number: 6 (lower is better)
Translates to: IFAVIEQSVTSREVS*GCAHKFRGRNRAVA
Trigger: TGCCACAGCCCTGTTGCGGCCCCGAAACTTGTGCGCGCAGCCCAAACTAACCTCACGTGAAGTGACGGACTGTTCTATGACTGCAAAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS TCA 72 bp CATAAGGTCCGCTCTCGGACGGGAGGAACGAGGCGTTaGGGGCATCGTCATAGAAGGTCGTTTCCATCTTTG +
Preference number: 6 (lower is better)
Translates to: HKVRSRTGGTRR*GHRHRRSFPSL
Trigger: CAAAGATGGAAACGACCTTCTATGACGATGCCCTCAACGCCTCGTTCCTCCCGTCCGAGAGCGGACCTTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS CAA 72 bp TTACCGCCGTGGAGAAGCCTAAGACGCAGGAAAGGCTaGCAAAAGTTGGCTCCGGGACTCTGCCACTTGTCT +
Preference number: 6 (lower is better)
Translates to: LPPWRSLRRRKG*QKLAPGLCHLS
Trigger: AGACAAGTGGCAGAGTCCCGGAGCCAACTTTTGCAAGCCTTTCCTGCGTCTTAGGCTTCTCCACGGCGGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS GCA 72 bp CCCCCGACGGTCTCTCTTCAAAATGTTTGCAACTGCTaGGTTAGCATGAGTTGGCACCCACTGTTAACGTGG +
Preference number: 6 (lower is better)
Translates to: PPTVSLQNVCNC*VSMSWHPLLTW
Trigger: CCACGTTAACAGTGGGTGCCAACTCATGCTAACGCAGCAGTTGCAAACATTTTGAAGAGAGACCGTCGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS GCA 72 bp CAGCCCCCGACGGTCTCTCTTCAAAATGTTTGCAACTaGTGCGTTAGCATGAGTTGGCACCCACTGTTAACG +
Preference number: 6 (lower is better)
Translates to: QPPTVSLQNVCN*CVSMSWHPLLT
Trigger: CGTTAACAGTGGGTGCCAACTCATGCTAACGCAGCAGTTGCAAACATTTTGAAGAGAGACCGTCGGGGGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS CCA 72 bp TGCTGCGTTAGCATGAGTTGGCACCCACTGTTAACGTaGTTCATGACTTTCTGTTTAAGCTGTGCCACCTGT +
Preference number: 6 (lower is better)
Translates to: CCVSMSWHPLLT*FMTFCLSCATC
Trigger: ACAGGTGGCACAGCTTAAACAGAAAGTCATGAACCACGTTAACAGTGGGTGCCAACTCATGCTAACGCAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1
CDS CCA 72 bp CTTCAAAATGTTTGCAACTGCTGCGTTAGCATGAGTTaGCACCCACTGTTAACGTGGTTCATGACTTTCTGT +
Preference number: 6 (lower is better)
Translates to: LQNVCNCCVSMS*HPLLTWFMTFC
Trigger: ACAGAAAGTCATGAACCACGTTAACAGTGGGTGCCAACTCATGCTAACGCAGCAGTTGCAAACATTTTGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371222.4
ENST00000678696.1