Pregenerated sensors for JTB (Homo sapiens)
Ensembl gene IDs: ENSG00000143543Ensembl transcript IDs: ENST00000271843.9, ENST00000356648.5, ENST00000368589.5, ENST00000428469.1, ENST00000461365.1, ENST00000471173.1
Found 21 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | TGCGGGCTAGGGAGGCGAGCGCCTTCTGCGGGGTCCGCAGGGCGCTaGAGGAAGGGCCGGCGGGGGCTCGCGGCCCTAGCGCCCGCTCAC | + |
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Preference number: 5 (lower is better) Translates to: CGLGRRAPSAGSAGR*RKGRRGLAALAPAH Trigger: GTGAGCGGGCGCTAGGGCCGCGAGCCCCCGCCGGCCCTTCCTCCAGCGCCCTGCGGACCCCGCAGAAGGCGCTCGCCTCCCTAGCCCGCA 79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000271843.9 ENST00000368589.5 ENST00000471173.1 |
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| CDS GCA 90 bp | AGTGTCGCACCTGTCGGAACAGAGGGACCTACTCCACAGGCCTCGTaGCTCCGTCGGAGCGCAGAGGCGGCACTTACTCTGCAGCCCTCC | + |
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Preference number: 5 (lower is better) Translates to: SVAPVGTEGPTPQAS*LRRSAEAALTLQPS Trigger: GGAGGGCTGCAGAGTAAGTGCCGCCTCTGCGCTCCGACGGAGGCACGAGGCCTGTGGAGTAGGTCCCTCTGTTCCGACAGGTGCGACACT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000271843.9 ENST00000356648.5 ENST00000368589.5 ENST00000461365.1 ENST00000471173.1 |
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| CDS CCA 90 bp | GCTTGGCAGAGCTTTAAGGTGAAAGCACAGAGCAACCAGCAGAGGTaGCGGCCCTGGGGGAGGCCAGGCCTCCCGGCACCCGCAAGCATG | + |
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Preference number: 5 (lower is better) Translates to: AWQSFKVKAQSNQQR*RPWGRPGLPAPASM Trigger: CATGCTTGCGGGTGCCGGGAGGCCTGGCCTCCCCCAGGGCCGCCACCTCTGCTGGTTGCTCTGTGCTTTCACCTTAAAGCTCTGCCAAGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000271843.9 ENST00000356648.5 ENST00000368589.5 ENST00000461365.1 |
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| CDS GCA 90 bp | ACATTTCTCCCAGGCTCTGCCCATCCAACTTCCCGGCACAGCGCTTaGCCTCATTCCATGTGGTGCCGGCCTTTTCCACCTGTGCTCTTG | + |
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Preference number: 5 (lower is better) Translates to: TFLPGSAHPTSRHSA*PHSMWCRPFPPVLL Trigger: CAAGAGCACAGGTGGAAAAGGCCGGCACCACATGGAATGAGGGCAAGCGCTGTGCCGGGAAGTTGGATGGGCAGAGCCTGGGAGAAATGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000356648.5 ENST00000368589.5 ENST00000428469.1 ENST00000471173.1 |
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| CDS GCA 90 bp | ACAGCGCTTGCCCTCATTCCATGTGGTGCCGGCCTTTTCCACCTGTaGTCTTGGTATATGGGGAAGATATCTGCAGCCCTCCCAGAGGTT | + |
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Preference number: 5 (lower is better) Translates to: TALALIPCGAGLFHL*SWYMGKISAALPEV Trigger: AACCTCTGGGAGGGCTGCAGATATCTTCCCCATATACCAAGAGCACAGGTGGAAAAGGCCGGCACCACATGGAATGAGGGCAAGCGCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000428469.1 |
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| CDS GCA 90 bp | ACAGCGCTTGCCCTCATTCCATGTGGTGCCGGCCTTTTCCACCTGTaGTCTTGGTATATGGGGAAGATACAGAGCTTTAAGGTGAAAGCA | + |
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Preference number: 5 (lower is better) Translates to: TALALIPCGAGLFHL*SWYMGKIQSFKVKA Trigger: TGCTTTCACCTTAAAGCTCTGTATCTTCCCCATATACCAAGAGCACAGGTGGAAAAGGCCGGCACCACATGGAATGAGGGCAAGCGCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000471173.1 |
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| CDS CCA 72 bp | CCTGGGGGAGGCCAGGCCTCCCGGCACCCGCAAGCATaGAGCGCCAAGTGTCGCACCTGTCGGAACAGAGGG | + |
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Preference number: 6 (lower is better) Translates to: PGGGQASRHPQA*SAKCRTCRNRG Trigger: CCCTCTGTTCCGACAGGTGCGACACTTGGCGCTCCATGCTTGCGGGTGCCGGGAGGCCTGGCCTCCCCCAGG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000271843.9 ENST00000356648.5 ENST00000368589.5 ENST00000461365.1 ENST00000471173.1 |
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| CDS GCA 72 bp | GATATGTTTTTGCGGGCTAGGGAGGCGAGCGCCTTCTaGGGGGTCCGCAGGGCGCTGGAGGAAGGGCCGGCG | + |
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Preference number: 6 (lower is better) Translates to: DMFLRAREASAF*GVRRALEEGPA Trigger: CGCCGGCCCTTCCTCCAGCGCCCTGCGGACCCCGCAGAAGGCGCTCGCCTCCCTAGCCCGCAAAAACATATC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000271843.9 ENST00000368589.5 ENST00000471173.1 |
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| CDS GCA 72 bp | CCTGTCGGAACAGAGGGACCTACTCCACAGGCCTCGTaGCTCCGTCGGAGCGCAGAGGCGGCACTTACTCTG | + |
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Preference number: 6 (lower is better) Translates to: PVGTEGPTPQAS*LRRSAEAALTL Trigger: CAGAGTAAGTGCCGCCTCTGCGCTCCGACGGAGGCACGAGGCCTGTGGAGTAGGTCCCTCTGTTCCGACAGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000271843.9 ENST00000356648.5 ENST00000368589.5 ENST00000461365.1 ENST00000471173.1 |
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| CDS CAA 72 bp | CCCAGGCTCTGCCCATCCAACTTCCCGGCACAGCGCTaGCCCTCATTCCATGTGGTGCCGGCCTTTTCCACC | + |
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Preference number: 6 (lower is better) Translates to: PRLCPSNFPAQR*PSFHVVPAFST Trigger: GGTGGAAAAGGCCGGCACCACATGGAATGAGGGCAAGCGCTGTGCCGGGAAGTTGGATGGGCAGAGCCTGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000356648.5 ENST00000368589.5 ENST00000428469.1 ENST00000471173.1 |
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| CDS CAA 90 bp | AACATTTCTCCCAGGCTCTGCCCATCCAACTTCCCGGCACAGCGCTaGCCCTCATTCCATGTGGTGCCGGCCTTTTCCACCTGTGCTCTT | + |
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Preference number: 6 (lower is better) Translates to: NISPRLCPSNFPAQR*PSFHVVPAFSTCAL Trigger: AAGAGCACAGGTGGAAAAGGCCGGCACCACATGGAATGAGGGCAAGCGCTGTGCCGGGAAGTTGGATGGGCAGAGCCTGGGAGAAATGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000356648.5 ENST00000368589.5 ENST00000428469.1 ENST00000471173.1 |
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| CDS GCA 72 bp | ACTTCCCGGCACAGCGCTTGCCCTCATTCCATGTGGTaGCGGCCTTTTCCACCTGTGCTCTTGGTATATGGG | + |
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Preference number: 6 (lower is better) Translates to: TSRHSACPHSMW*RPFPPVLLVYG Trigger: CCCATATACCAAGAGCACAGGTGGAAAAGGCCGGCACCACATGGAATGAGGGCAAGCGCTGTGCCGGGAAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000356648.5 ENST00000368589.5 ENST00000428469.1 ENST00000471173.1 |
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| CDS CCA 72 bp | CCAACTTCCCGGCACAGCGCTTGCCCTCATTCCATGTaGTGCCGGCCTTTTCCACCTGTGCTCTTGGTATAT | + |
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Preference number: 6 (lower is better) Translates to: PTSRHSACPHSM*CRPFPPVLLVY Trigger: ATATACCAAGAGCACAGGTGGAAAAGGCCGGCACCACATGGAATGAGGGCAAGCGCTGTGCCGGGAAGTTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000356648.5 ENST00000368589.5 ENST00000428469.1 ENST00000471173.1 |
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| CDS GCA 72 bp | TTCCCAGACAATCACCCACCTGACAGCTTCTCTTCCTaGACGGGAGCCTCTGCTTGGCAGAGCTTTAAGGTG | + |
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Preference number: 6 (lower is better) Translates to: FPDNHPPDSFSS*TGASAWQSFKV Trigger: CACCTTAAAGCTCTGCCAAGCAGAGGCTCCCGTGCAGGAAGAGAAGCTGTCAGGTGGGTGATTGTCTGGGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000356648.5 ENST00000368589.5 |
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| CDS GCA 72 bp | GCCCTCATTCCATGTGGTGCCGGCCTTTTCCACCTGTaGTCTTGGTATATGGGGAAGATATCTGCAGCCCTC | + |
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Preference number: 6 (lower is better) Translates to: ALIPCGAGLFHL*SWYMGKISAAL Trigger: GAGGGCTGCAGATATCTTCCCCATATACCAAGAGCACAGGTGGAAAAGGCCGGCACCACATGGAATGAGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000428469.1 |
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| CDS CAA 72 bp | CATTCCATGTGGTGCCGGCCTTTTCCACCTGTGCTCTaGGTATATGGGGAAGATATCTGCAGCCCTCCCAGA | + |
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Preference number: 6 (lower is better) Translates to: HSMWCRPFPPVL*VYGEDICSPPR Trigger: TCTGGGAGGGCTGCAGATATCTTCCCCATATACCAAGAGCACAGGTGGAAAAGGCCGGCACCACATGGAATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000428469.1 |
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| CDS GCA 72 bp | GCCCTCATTCCATGTGGTGCCGGCCTTTTCCACCTGTaGTCTTGGTATATGGGGAAGATACAGAGCTTTAAG | + |
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Preference number: 6 (lower is better) Translates to: ALIPCGAGLFHL*SWYMGKIQSFK Trigger: CTTAAAGCTCTGTATCTTCCCCATATACCAAGAGCACAGGTGGAAAAGGCCGGCACCACATGGAATGAGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000471173.1 |
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| CDS CAA 72 bp | ACTCTTCCACCAGCCAGCATGGCAAATTTGAGGTGCTaGCTGAAAGGAAAGATAAATGCCAGCCCCAGGCCA | + |
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Preference number: 6 (lower is better) Translates to: TLPPASMANLRC*LKGKINASPRP Trigger: TGGCCTGGGGCTGGCATTTATCTTTCCTTTCAGCAAGCACCTCAAATTTGCCATGCTGGCTGGTGGAAGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000356648.5 ENST00000368589.5 ENST00000428469.1 ENST00000471173.1 |
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| CDS CAA 90 bp | ACTCTTCTGCTACCACAAACTCTTCCACCAGCCAGCATGGCAAATTaGAGGTGCTTGCTGAAAGGAAAGATAAATGCCAGCCCCAGGCCA | + |
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Preference number: 6 (lower is better) Translates to: TLLLPQTLPPASMAN*RCLLKGKINASPRP Trigger: TGGCCTGGGGCTGGCATTTATCTTTCCTTTCAGCAAGCACCTCAAATTTGCCATGCTGGCTGGTGGAAGAGTTTGTGGTAGCAGAAGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000356648.5 ENST00000368589.5 ENST00000428469.1 ENST00000471173.1 |
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| CDS CCA 72 bp | ACACTCAGGGGTAGTTTTAGCCCGGAAATTAGAGCATaGAGAGCACTCTTCTGCTACCACAAACTCTTCCAC | + |
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Preference number: 6 (lower is better) Translates to: TLRGSFSPEIRA*RALFCYHKLFH Trigger: GTGGAAGAGTTTGTGGTAGCAGAAGAGTGCTCTCCATGCTCTAATTTCCGGGCTAAAACTACCCCTGAGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000271843.9 ENST00000356648.5 ENST00000368589.5 ENST00000428469.1 ENST00000461365.1 ENST00000471173.1 |
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| CDS CAA 90 bp | CTACCACAAACTCTTCCACCAGCCAGCATGGCAAATTTGAGGTGCTaGCTGAAAGGAAAGATAAATGCCAGCCCCAGGCCATTCAGAAAA | + |
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Preference number: 6 (lower is better) Translates to: LPQTLPPASMANLRC*LKGKINASPRPFRK Trigger: TTTTCTGAATGGCCTGGGGCTGGCATTTATCTTTCCTTTCAGCAAGCACCTCAAATTTGCCATGCTGGCTGGTGGAAGAGTTTGTGGTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000356648.5 ENST00000368589.5 ENST00000428469.1 ENST00000471173.1 |
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