RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for JPT2 (Homo sapiens)

Ensembl gene IDs: ENSG00000206053

Ensembl transcript IDs: ENST00000248098.8, ENST00000382710.8, ENST00000382711.9, ENST00000561516.5, ENST00000562569.1, ENST00000562684.5, ENST00000565851.5, ENST00000566691.5, ENST00000566742.5, ENST00000566925.5, ENST00000567717.1, ENST00000568376.1, ENST00000569256.5, ENST00000569765.5

Found 616 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ATGGCTGTCGACTGTGGGCATGGGCTCCTGCTCCTTGGCGGGGCCTaGTTTTCTGGCGCTGCCTTTCTCACCTGGCTCTGCTCCAGCCGG +
Preference number: 1 (lower is better)
Translates to: MAVDCGHGLLLLGGA*FSGAAFLTWLCSSR
Trigger: CCGGCTGGAGCAGAGCCAGGTGAGAAAGGCAGCGCCAGAAAAGCAGGCCCCGCCAAGGAGCAGGAGCCCATGCCCACAGTCGACAGCCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561516.5
ENST00000569765.5
3UTR TCA 90 bp AAGGAGATGCTGGATTTGCCTCCCGGTGGGTTCAGGACCTTGTTGTaGGAGCGAGGCCGCGGCCCCAGCCGGGGCTCATGGCTGTCGACT +
Preference number: 1 (lower is better)
Translates to: KEMLDLPPGGFRTLL*ERGRGPSRGSWLST
Trigger: AGTCGACAGCCATGAGCCCCGGCTGGGGCCGCGGCCTCGCTCTCACAACAAGGTCCTGAACCCACCGGGAGGCAAATCCAGCATCTCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561516.5
ENST00000569765.5
3UTR CCA 90 bp CAGTGGCTTCTCTTAGTAGAAGGAGATGCTGGATTTGCCTCCCGGTaGGTTCAGGACCTTGTTGTGAGAGCGAGGCCGCGGCCCCAGCCG +
Preference number: 1 (lower is better)
Translates to: QWLLLVEGDAGFASR*VQDLVVRARPRPQP
Trigger: CGGCTGGGGCCGCGGCCTCGCTCTCACAACAAGGTCCTGAACCCACCGGGAGGCAAATCCAGCATCTCCTTCTACTAAGAGAAGCCACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561516.5
ENST00000569765.5
3UTR GCA 90 bp AGCAAAGCTGCTGCCGCCACCCAGACGTTCTCCTCTGTTAACAGATaGCCACCCAAGGGCAGCATGAGAACTGGGCCTGCAGCCCTTGAG +
Preference number: 1 (lower is better)
Translates to: SKAAAATQTFSSVNR*PPKGSMRTGPAALE
Trigger: CTCAAGGGCTGCAGGCCCAGTTCTCATGCTGCCCTTGGGTGGGCATCTGTTAACAGAGGAGAACGTCTGGGTGGCGGCAGCAGCTTTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
3UTR GCA 90 bp CCGGGTGGAGCAGTGGCTTCTCTTAGTAGAAGGAGATGCTGGATTTaGCTCCCGGTGGGTTCAGGACCTTGTTGTGAGAGCGAGGCCGCG +
Preference number: 1 (lower is better)
Translates to: PGGAVASLSRRRCWI*LPVGSGPCCESEAA
Trigger: CGCGGCCTCGCTCTCACAACAAGGTCCTGAACCCACCGGGAGGCAAATCCAGCATCTCCTTCTACTAAGAGAAGCCACTGCTCCACCCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561516.5
ENST00000569765.5
3UTR GCA 90 bp CTGCCAGGGGCGGAAGTAAAGAGCTTTTCCTCTCACCTAGCGGACTaGAAGGGCTGGGAGAATCACAGGGCCCAGTACCGTCACGTCCTA +
Preference number: 1 (lower is better)
Translates to: LPGAEVKSFSSHLAD*KGWENHRAQYRHVL
Trigger: TAGGACGTGACGGTACTGGGCCCTGTGATTCTCCCAGCCCTTGCAGTCCGCTAGGTGAGAGGAAAAGCTCTTTACTTCCGCCCCTGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
3UTR GCA 90 bp GAATCCCACCCCACTGCCTCGCAGAGGGAAAGAAGGCAGGACAGATaGAAGAAGAGTAATGTCAGGGGCTCCATCACAGCTGCCCAGGGG +
Preference number: 1 (lower is better)
Translates to: ESHPTASQRERRQDR*KKSNVRGSITAAQG
Trigger: CCCCTGGGCAGCTGTGATGGAGCCCCTGACATTACTCTTCTTGCATCTGTCCTGCCTTCTTTCCCTCTGCGAGGCAGTGGGGTGGGATTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
3UTR GCA 90 bp GGTCTGGCTCCGGGTGGAGCAGTGGCTTCTCTTAGTAGAAGGAGATaGTGGATTTGCCTCCCGGTGGGTTCAGGACCTTGTTGTGAGAGC +
Preference number: 1 (lower is better)
Translates to: GLAPGGAVASLSRRR*WICLPVGSGPCCES
Trigger: GCTCTCACAACAAGGTCCTGAACCCACCGGGAGGCAAATCCAGCATCTCCTTCTACTAAGAGAAGCCACTGCTCCACCCGGAGCCAGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561516.5
ENST00000569765.5
3UTR CCA 90 bp CTGGCTCCGGGTGGAGCAGTGGCTTCTCTTAGTAGAAGGAGATGCTaGATTTGCCTCCCGGTGGGTTCAGGACCTTGTTGTGAGAGCGAG +
Preference number: 1 (lower is better)
Translates to: LAPGGAVASLSRRRC*ICLPVGSGPCCESE
Trigger: CTCGCTCTCACAACAAGGTCCTGAACCCACCGGGAGGCAAATCCAGCATCTCCTTCTACTAAGAGAAGCCACTGCTCCACCCGGAGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561516.5
ENST00000569765.5
3UTR GCA 90 bp CCAGTTCCTCTCAAACCTGGACTACACATGAGTGATGGCCAGGGGTaGCCCATTTCATCCCCACAGAGGCATCTCCCAGCCATCTGGAAG +
Preference number: 1 (lower is better)
Translates to: PVPLKPGLHMSDGQG*PISSPQRHLPAIWK
Trigger: CTTCCAGATGGCTGGGAGATGCCTCTGTGGGGATGAAATGGGGCACCCCTGGCCATCACTCATGTGTAGTCCAGGTTTGAGAGGAACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
3UTR TCA 90 bp CATGATCCTTGGGTTTGTTTGGGTGTGCCAAGCGTGAAGTGGCAGTaGCCGGAGACCCAAAAATGTCGCTGGTCTTCCCTCCAGGTGGGT +
Preference number: 1 (lower is better)
Translates to: HDPWVCLGVPSVKWQ*PETQKCRWSSLQVG
Trigger: ACCCACCTGGAGGGAAGACCAGCGACATTTTTGGGTCTCCGGTCACTGCCACTTCACGCTTGGCACACCCAAACAAACCCAAGGATCATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566925.5
3UTR GCA 90 bp ATGTCGCTGGTCTTCCCTCCAGGTGGGTTCAGGTGCTGTCGAGTCTaGACGGGGGTTGATTCGTCAAAGATACCACTTCCTTTACCCCCT +
Preference number: 1 (lower is better)
Translates to: MSLVFPPGGFRCCRV*TGVDSSKIPLPLPP
Trigger: AGGGGGTAAAGGAAGTGGTATCTTTGACGAATCAACCCCCGTGCAGACTCGACAGCACCTGAACCCACCTGGAGGGAAGACCAGCGACAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000566925.5
3UTR CCA 90 bp GCTACCCTATCTCTTGAGTTTCTGGTCTGGCTCCGGGTGGAGCAGTaGCTTCTCTTAGTAGAAGGAGATGCTGGATTTGCCTCCCGGTGG +
Preference number: 1 (lower is better)
Translates to: ATLSLEFLVWLRVEQ*LLLVEGDAGFASRW
Trigger: CCACCGGGAGGCAAATCCAGCATCTCCTTCTACTAAGAGAAGCCACTGCTCCACCCGGAGCCAGACCAGAAACTCAAGAGATAGGGTAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561516.5
ENST00000569765.5
3UTR GCA 90 bp GGACACCTCCCAAATGTAAACGACAGCCACACAGCAGGGCTTGCATaGGCAGGAACTCTTCTTCTCCCAGTGAGCAGACTAAGCACTCTG +
Preference number: 1 (lower is better)
Translates to: GHLPNVNDSHTAGLA*AGTLLLPVSRLSTL
Trigger: CAGAGTGCTTAGTCTGCTCACTGGGAGAAGAAGAGTTCCTGCGCATGCAAGCCCTGCTGTGTGGCTGTCGTTTACATTTGGGAGGTGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
3UTR GCA 90 bp GGAGACCCAAAAATGTCGCTGGTCTTCCCTCCAGGTGGGTTCAGGTaGTGTCGAGTCTGCACGGGGGTTGATTCGTCAAAGATACCACTT +
Preference number: 1 (lower is better)
Translates to: GDPKMSLVFPPGGFR*CRVCTGVDSSKIPL
Trigger: AAGTGGTATCTTTGACGAATCAACCCCCGTGCAGACTCGACAGCACCTGAACCCACCTGGAGGGAAGACCAGCGACATTTTTGGGTCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000566925.5
3UTR CCA 90 bp GCGGAAGTAAAGAGCTTTTCCTCTCACCTAGCGGACTGCAAGGGCTaGGAGAATCACAGGGCCCAGTACCGTCACGTCCTATTTCTTCCT +
Preference number: 1 (lower is better)
Translates to: AEVKSFSSHLADCKG*ENHRAQYRHVLFLP
Trigger: AGGAAGAAATAGGACGTGACGGTACTGGGCCCTGTGATTCTCCCAGCCCTTGCAGTCCGCTAGGTGAGAGGAAAAGCTCTTTACTTCCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
3UTR TCA 90 bp AAGGACCAAGACCAGCCCTGTGTGAAAGACAGGCAGATTCCAACATaGGATCAGATCAGGCCGAGGTTTCAGATGGCAGGAACTGGGCAC +
Preference number: 1 (lower is better)
Translates to: KDQDQPCVKDRQIPT*DQIRPRFQMAGTGH
Trigger: GTGCCCAGTTCCTGCCATCTGAAACCTCGGCCTGATCTGATCTCATGTTGGAATCTGCCTGTCTTTCACACAGGGCTGGTCTTGGTCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
3UTR GCA 90 bp TACAGGACACCTCCCAAATGTAAACGACAGCCACACAGCAGGGCTTaGATGCGCAGGAACTCTTCTTCTCCCAGTGAGCAGACTAAGCAC +
Preference number: 1 (lower is better)
Translates to: YRTPPKCKRQPHSRA*MRRNSSSPSEQTKH
Trigger: GTGCTTAGTCTGCTCACTGGGAGAAGAAGAGTTCCTGCGCATGCAAGCCCTGCTGTGTGGCTGTCGTTTACATTTGGGAGGTGTCCTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
3UTR CCA 90 bp TGCTTACGCCTCCTCCATCCCACAGCAGCAGTGGACAGGCTGTTTTaGTTTCTTTCAGTCATTCCTAGACATCCAATCAGCTGGCGGGCT +
Preference number: 1 (lower is better)
Translates to: CLRLLHPTAAVDRLF*FLSVIPRHPISWRA
Trigger: AGCCCGCCAGCTGATTGGATGTCTAGGAATGACTGAAAGAAACCAAAACAGCCTGTCCACTGCTGCTGTGGGATGGAGGAGGCGTAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248098.8
ENST00000561516.5
ENST00000562684.5
3UTR GCA 90 bp ACCCTGGCCTCCCAAAGACCCAAAGACTACAGACCTGAGCCACCATaGCCACCTGTTTTCTTGACAGGACTTGCATATGACAAGCTCTCT +
Preference number: 1 (lower is better)
Translates to: TLASQRPKDYRPEPP*PPVFLTGLAYDKLS
Trigger: AGAGAGCTTGTCATATGCAAGTCCTGTCAAGAAAACAGGTGGGCATGGTGGCTCAGGTCTGTAGTCTTTGGGTCTTTGGGAGGCCAGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000248098.8
3UTR CCA 90 bp ACAGGCAGATTCCAACATGAGATCAGATCAGGCCGAGGTTTCAGATaGCAGGAACTGGGCACTTCAGAGGGTCAGGGCACCAAAACAATC +
Preference number: 1 (lower is better)
Translates to: TGRFQHEIRSGRGFR*QELGTSEGQGTKTI
Trigger: GATTGTTTTGGTGCCCTGACCCTCTGAAGTGCCCAGTTCCTGCCATCTGAAACCTCGGCCTGATCTGATCTCATGTTGGAATCTGCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
3UTR CCA 90 bp TCCAACATGAGATCAGATCAGGCCGAGGTTTCAGATGGCAGGAACTaGGCACTTCAGAGGGTCAGGGCACCAAAACAATCTTCCATGAAG +
Preference number: 1 (lower is better)
Translates to: SNMRSDQAEVSDGRN*ALQRVRAPKQSSMK
Trigger: CTTCATGGAAGATTGTTTTGGTGCCCTGACCCTCTGAAGTGCCCAGTTCCTGCCATCTGAAACCTCGGCCTGATCTGATCTCATGTTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
3UTR GCA 90 bp TTGACAGGACTTGCATATGACAAGCTCTCTGCTTCTCCTCACCTATaGATTGCAAGCCAGGTCAGAGGCAGGTTAAACACCTTAAGGACA +
Preference number: 1 (lower is better)
Translates to: LTGLAYDKLSASPHL*IASQVRGRLNTLRT
Trigger: TGTCCTTAAGGTGTTTAACCTGCCTCTGACCTGGCTTGCAATGCATAGGTGAGGAGAAGCAGAGAGCTTGTCATATGCAAGTCCTGTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000248098.8
3UTR CCA 90 bp GGGAATTGGACAGGTGTGACTTTGCTACTGAACTCCTTCATCTCCTaGCCTAAGGTCTCTAGTCTCTTCTGGAAGCTTGTTTGTGAGTTA +
Preference number: 1 (lower is better)
Translates to: GNWTGVTLLLNSFIS*PKVSSLFWKLVCEL
Trigger: TAACTCACAAACAAGCTTCCAGAAGAGACTAGAGACCTTAGGCCAGGAGATGAAGGAGTTCAGTAGCAAAGTCACACCTGTCCAATTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
3UTR-3UTR CCA 90 bp GGCCGCGGCCCCAGCCGGGGCTCATGGCTGTCGACTGTGGGCATGGGCTCCTGCCGGGGCCTGCTTTTCTaGCGCTGCCTTTCTCACCTG +
Preference number: 2 (lower is better)
Translates to: GRGPSRGSWLSTVGMGSCRGLLF*RCLSHL
Trigger: CAGGTGAGAAAGGCAGCGCCAGAAAAGCAGGCCCCG...GCAGGAGCCCATGCCCACAGTCGACAGCCATGAGCCCCGGCTGGGGCCGCGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000561516.5
ENST00000569765.5
3UTR-3UTR GCA 90 bp GGCCGCGGCCCCAGCCGGGGCTCATGGCTGTCGACTGTGGGCATGGGCTCCTGCTTTCTCACCTGGCTCTaGTCCAGCCGGGATGCTCCT +
Preference number: 2 (lower is better)
Translates to: GRGPSRGSWLSTVGMGSCFLTWL*SSRDAP
Trigger: AGGAGCATCCCGGCTGGAGCAGAGCCAGGTGAGAAA...GCAGGAGCCCATGCCCACAGTCGACAGCCATGAGCCCCGGCTGGGGCCGCGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561516.5
ENST00000569765.5
3UTR-3UTR GCA 90 bp CGAGGCCGCGGCCCCAGCCGGGGCTCATGGCTGTCGACTGTGGGCATGGGCTCCCTGCTTTTCTGGCGCTaGCTTTCTCACCTGGCTCTG +
Preference number: 2 (lower is better)
Translates to: RGRGPSRGSWLSTVGMGSLLFWR*LSHLAL
Trigger: CAGAGCCAGGTGAGAAAGGCAGCGCCAGAAAAGCAG...GGAGCCCATGCCCACAGTCGACAGCCATGAGCCCCGGCTGGGGCCGCGGCCTCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000561516.5
ENST00000569765.5
3UTR-3UTR CCA 90 bp GGCCGCGGCCCCAGCCGGGGCTCATGGCTGTCGACTGTGGGCATGGGCTCCTGCTATCTCTTGAGTTTCTaGTCTGGCTCCGGGTGGAGC +
Preference number: 2 (lower is better)
Translates to: GRGPSRGSWLSTVGMGSCYLLSF*SGSGWS
Trigger: GCTCCACCCGGAGCCAGACCAGAAACTCAAGAGATA...GCAGGAGCCCATGCCCACAGTCGACAGCCATGAGCCCCGGCTGGGGCCGCGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561516.5
ENST00000569765.5
3UTR-3UTR CCA 90 bp CAGCCGGGGCTCATGGCTGTCGACTGTGGGCATGGGCTCCTGCTCCTTGGCGGGCTTGAGTTTCTGGTCTaGCTCCGGGTGGAGCAGTGG +
Preference number: 2 (lower is better)
Translates to: QPGLMAVDCGHGLLLLGGLEFLV*LRVEQW
Trigger: CCACTGCTCCACCCGGAGCCAGACCAGAAACTCAAG...CCCGCCAAGGAGCAGGAGCCCATGCCCACAGTCGACAGCCATGAGCCCCGGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561516.5
ENST00000569765.5
3UTR-3UTR GCA 90 bp GATGCTGGATTTGCCTCCCGGTGGGTTCAGGACCTTGTTGTGAGAGCGAGGCCGGTGGGCATGGGCTCCTaGTCCTTGGCGGGGCCTGCT +
Preference number: 2 (lower is better)
Translates to: DAGFASRWVQDLVVRARPVGMGS*SLAGPA
Trigger: AGCAGGCCCCGCCAAGGAGCAGGAGCCCATGCCCAC...CGGCCTCGCTCTCACAACAAGGTCCTGAACCCACCGGGAGGCAAATCCAGCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561516.5
ENST00000569765.5
3UTR-3UTR CCA 90 bp TGCTGGATTTGCCTCCCGGTGGGTTCAGGACCTTGTTGTGAGAGCGAGGCCGCGCCCAGCCGGGGCTCATaGCTGTCGACTGTGGGCATG +
Preference number: 2 (lower is better)
Translates to: CWICLPVGSGPCCESEAAPSRGS*LSTVGM
Trigger: CATGCCCACAGTCGACAGCCATGAGCCCCGGCTGGG...CGCGGCCTCGCTCTCACAACAAGGTCCTGAACCCACCGGGAGGCAAATCCAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561516.5
ENST00000569765.5
3UTR-3UTR CCA 90 bp CATGGCTGTCGACTGTGGGCATGGGCTCCTGCTCCTTGGCGGGGCCTGCTTTTCGCTGCCTTTCTCACCTaGCTCTGCTCCAGCCGGGAT +
Preference number: 2 (lower is better)
Translates to: HGCRLWAWAPAPWRGLLFAAFLT*LCSSRD
Trigger: ATCCCGGCTGGAGCAGAGCCAGGTGAGAAAGGCAGC...GAAAAGCAGGCCCCGCCAAGGAGCAGGAGCCCATGCCCACAGTCGACAGCCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561516.5
ENST00000569765.5
3UTR-3UTR TCA 90 bp ATCCAATCAGCTGGCGGGCTGTTGATCCAAGGACCATGCCCTGCCCCACCTCCCTCCAAGCAGCTGTCATaGCGGCCAGGAGACGCTGAG +
Preference number: 2 (lower is better)
Translates to: IQSAGGLLIQGPCPAPPPSKQLS*RPGDAE
Trigger: CTCAGCGTCTCCTGGCCGTCATGACAGCTGCTTGGA...GGGAGGTGGGGCAGGGCATGGTCCTTGGATCAACAGCCCGCCAGCTGATTGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248098.8
ENST00000561516.5
ENST00000562684.5
3UTR-3UTR TCA 90 bp CACGGGTCTCCAAGCAGCTGTCATGACGGCCAGGAGACGCTGAGCAGCCAGGCTTGGACTACACATGAGTaGTGGCCAGGGGTGCCCCAT +
Preference number: 2 (lower is better)
Translates to: HGSPSSCHDGQETLSSQAWTTHE*WPGVPH
Trigger: ATGGGGCACCCCTGGCCATCACTCATGTGTAGTCCA...AGCCTGGCTGCTCAGCGTCTCCTGGCCGTCATGACAGCTGCTTGGAGACCCGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
3UTR-3UTR GCA 90 bp CACGGGTCTCCAAGCAGCTGTCATGACGGCCAGGAGACGCTGAGCAGCCAGGCTAGTGATGGCCAGGGGTaGCCCATTTCATCCCCACAG +
Preference number: 2 (lower is better)
Translates to: HGSPSSCHDGQETLSSQASDGQG*PISSPQ
Trigger: CTGTGGGGATGAAATGGGGCACCCCTGGCCATCACT...AGCCTGGCTGCTCAGCGTCTCCTGGCCGTCATGACAGCTGCTTGGAGACCCGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
3UTR-3UTR GCA 90 bp CTTCCAGTTCCTCTCAAACCTGGACTACACATGAGTGATGGCCAGGGGTGCCCCGTGGGCATGGGCTCCTaGTCCTTGGCGGGGCCTGCT +
Preference number: 2 (lower is better)
Translates to: LPVPLKPGLHMSDGQGCPVGMGS*SLAGPA
Trigger: AGCAGGCCCCGCCAAGGAGCAGGAGCCCATGCCCAC...GGGGCACCCCTGGCCATCACTCATGTGTAGTCCAGGTTTGAGAGGAACTGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000561516.5
ENST00000569765.5
3UTR-3UTR CCA 90 bp GTGCCCCATTTCATCCCCACAGAGGCATCTCCCAGCCATCTGGAAGGCACGGGTTGGGCTCCTGCTCCTTaGCGGGGCCTGCTTTTCTGG +
Preference number: 2 (lower is better)
Translates to: VPHFIPTEASPSHLEGTGWAPAP*RGLLFW
Trigger: CCAGAAAAGCAGGCCCCGCCAAGGAGCAGGAGCCCA...ACCCGTGCCTTCCAGATGGCTGGGAGATGCCTCTGTGGGGATGAAATGGGGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000561516.5
ENST00000569765.5
3UTR-3UTR CCA 90 bp GATGCTGGATTTGCCTCCCGGTGGGTTCAGGACCTTGTTGTGAGAGCGAGGCCGTGTCGACTGTGGGCATaGGCTCCTGCTCCTTGGCGG +
Preference number: 2 (lower is better)
Translates to: DAGFASRWVQDLVVRARPCRLWA*APAPWR
Trigger: CCGCCAAGGAGCAGGAGCCCATGCCCACAGTCGACA...CGGCCTCGCTCTCACAACAAGGTCCTGAACCCACCGGGAGGCAAATCCAGCATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561516.5
ENST00000569765.5
3UTR-3UTR GCA 90 bp CCCCATTTCATCCCCACAGAGGCATCTCCCAGCCATCTGGAAGGCACGGGTCTCCTCCTTGGCGGGGCCTaGTTTTCTGGCGCTGCCTTT +
Preference number: 2 (lower is better)
Translates to: PHFIPTEASPSHLEGTGLLLGGA*FSGAAF
Trigger: AAAGGCAGCGCCAGAAAAGCAGGCCCCGCCAAGGAG...GAGACCCGTGCCTTCCAGATGGCTGGGAGATGCCTCTGTGGGGATGAAATGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000561516.5
ENST00000569765.5
3UTR-3UTR CCA 90 bp CCCCATTTCATCCCCACAGAGGCATCTCCCAGCCATCTGGAAGGCACGGGTCTCCGGGGCCTGCTTTTCTaGCGCTGCCTTTCTCACCTG +
Preference number: 2 (lower is better)
Translates to: PHFIPTEASPSHLEGTGLRGLLF*RCLSHL
Trigger: CAGGTGAGAAAGGCAGCGCCAGAAAAGCAGGCCCCG...GAGACCCGTGCCTTCCAGATGGCTGGGAGATGCCTCTGTGGGGATGAAATGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000561516.5
ENST00000569765.5
3UTR-3UTR CCA 90 bp CACGGGTCTCCAAGCAGCTGTCATGACGGCCAGGAGACGCTGAGCAGCCAGGCTGGATTTGCCTCCCGGTaGGTTCAGGACCTTGTTGTG +
Preference number: 2 (lower is better)
Translates to: HGSPSSCHDGQETLSSQAGFASR*VQDLVV
Trigger: CACAACAAGGTCCTGAACCCACCGGGAGGCAAATCC...AGCCTGGCTGCTCAGCGTCTCCTGGCCGTCATGACAGCTGCTTGGAGACCCGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561516.5
ENST00000569765.5
3UTR-3UTR TCA 90 bp GGTGCCCCATTTCATCCCCACAGAGGCATCTCCCAGCCATCTGGAAGGCACGGGGGCTACCCTATCTCTTaGGTTTCTGGTCTGGCTCCG +
Preference number: 2 (lower is better)
Translates to: GAPFHPHRGISQPSGRHGGYPIS*VSGLAP
Trigger: CGGAGCCAGACCAGAAACTCAAGAGATAGGGTAGCC...CCCGTGCCTTCCAGATGGCTGGGAGATGCCTCTGTGGGGATGAAATGGGGCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
3UTR-3UTR TCA 90 bp TGCTGGATTTGCCTCCCGGTGGGTTCAGGACCTTGTTGTGAGAGCGAGGCCGCGGGCTACCCTATCTCTTaGGTTTCTGGTCTGGCTCCG +
Preference number: 2 (lower is better)
Translates to: CWICLPVGSGPCCESEAAGYPIS*VSGLAP
Trigger: CGGAGCCAGACCAGAAACTCAAGAGATAGGGTAGCC...CGCGGCCTCGCTCTCACAACAAGGTCCTGAACCCACCGGGAGGCAAATCCAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561516.5
ENST00000569765.5
3UTR-3UTR TCA 90 bp CCATTTCATCCCCACAGAGGCATCTCCCAGCCATCTGGAAGGCACGGGTCTCCATCCAAGCAGCTGTCATaGCGGCCAGGAGACGCTGAG +
Preference number: 2 (lower is better)
Translates to: PFHPHRGISQPSGRHGSPSKQLS*RPGDAE
Trigger: CTCAGCGTCTCCTGGCCGTCATGACAGCTGCTTGGA...TGGAGACCCGTGCCTTCCAGATGGCTGGGAGATGCCTCTGTGGGGATGAAATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
3UTR-3UTR TCA 90 bp CTGGCTCCGGGTGGAGCAGTGGCTTCTCTTAGTAGAAGGAGATGCTGGATTTGCTTCAGGACCTTGTTGTaGGAGCGAGGCCGCGGCCCC +
Preference number: 2 (lower is better)
Translates to: LAPGGAVASLSRRRCWICFRTLL*ERGRGP
Trigger: GGGGCCGCGGCCTCGCTCTCACAACAAGGTCCTGAA...GCAAATCCAGCATCTCCTTCTACTAAGAGAAGCCACTGCTCCACCCGGAGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561516.5
ENST00000569765.5
3UTR-3UTR GCA 90 bp AGCAGGGCTTGCATGCGCAGGAACTCTTCTTCTCCCAGTGAGCAGACTAAGCACCCAAGGACCATGCCCTaGCCCACCTCCCCACCCTCA +
Preference number: 2 (lower is better)
Translates to: SRACMRRNSSSPSEQTKHPRTMP*PTSPPS
Trigger: TGAGGGTGGGGAGGTGGGGCAGGGCATGGTCCTTGG...GTGCTTAGTCTGCTCACTGGGAGAAGAAGAGTTCCTGCGCATGCAAGCCCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
3UTR-3UTR GCA 90 bp CCTCCCAAATGTAAACGACAGCCACACAGCAGGGCTTGCATGCGCAGGAACTCTCCAAGGACCATGCCCTaGCCCACCTCCCCACCCTCA +
Preference number: 2 (lower is better)
Translates to: PPKCKRQPHSRACMRRNSPRTMP*PTSPPS
Trigger: TGAGGGTGGGGAGGTGGGGCAGGGCATGGTCCTTGG...AGAGTTCCTGCGCATGCAAGCCCTGCTGTGTGGCTGTCGTTTACATTTGGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
3UTR-3UTR CCA 90 bp CCCATTTCATCCCCACAGAGGCATCTCCCAGCCATCTGGAAGGCACGGGTCTCCCTTGAGTTTCTGGTCTaGCTCCGGGTGGAGCAGTGG +
Preference number: 2 (lower is better)
Translates to: PISSPQRHLPAIWKARVSLEFLV*LRVEQW
Trigger: CCACTGCTCCACCCGGAGCCAGACCAGAAACTCAAG...GGAGACCCGTGCCTTCCAGATGGCTGGGAGATGCCTCTGTGGGGATGAAATGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
3UTR-3UTR CCA 90 bp CCATTTCATCCCCACAGAGGCATCTCCCAGCCATCTGGAAGGCACGGGTCTCCAGCTGCCTTTCTCACCTaGCTCTGCTCCAGCCGGGAT +
Preference number: 2 (lower is better)
Translates to: PFHPHRGISQPSGRHGSPAAFLT*LCSSRD
Trigger: ATCCCGGCTGGAGCAGAGCCAGGTGAGAAAGGCAGC...TGGAGACCCGTGCCTTCCAGATGGCTGGGAGATGCCTCTGTGGGGATGAAATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561516.5
ENST00000569765.5
3UTR-3UTR CCA 90 bp GCTACCCTATCTCTTGAGTTTCTGGTCTGGCTCCGGGTGGAGCAGTGGCTTCTCTGTCGACTGTGGGCATaGGCTCCTGCTCCTTGGCGG +
Preference number: 2 (lower is better)
Translates to: ATLSLEFLVWLRVEQWLLCRLWA*APAPWR
Trigger: CCGCCAAGGAGCAGGAGCCCATGCCCACAGTCGACA...GAGAAGCCACTGCTCCACCCGGAGCCAGACCAGAAACTCAAGAGATAGGGTAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561516.5
ENST00000569765.5
3UTR-3UTR TCA 90 bp CCCCTTCCAGTTCCTCTCAAACCTGGACTACACATGAGTGATGGCCAGGGGTGCTCCAAGCAGCTGTCATaGCGGCCAGGAGACGCTGAG +
Preference number: 2 (lower is better)
Translates to: PLPVPLKPGLHMSDGQGCSKQLS*RPGDAE
Trigger: CTCAGCGTCTCCTGGCCGTCATGACAGCTGCTTGGA...GCACCCCTGGCCATCACTCATGTGTAGTCCAGGTTTGAGAGGAACTGGAAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
3UTR-3UTR TCA 90 bp GTTTCTGCTTACGCCTCCTCCATCCCACAGCAGCAGTGGACAGGCTGTTTTGGTCAGCTGGCGGGCTGTTaGTCCAAGGACCATGCCCTG +
Preference number: 2 (lower is better)
Translates to: VSAYASSIPQQQWTGCFGQLAGC*SKDHAL
Trigger: CAGGGCATGGTCCTTGGATCAACAGCCCGCCAGCTG...ACCAAAACAGCCTGTCCACTGCTGCTGTGGGATGGAGGAGGCGTAAGCAGAAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248098.8
ENST00000561516.5
ENST00000562684.5
3UTR-3UTR GCA 90 bp CCATTTCATCCCCACAGAGGCATCTCCCAGCCATCTGGAAGGCACGGGTCTCCAAGTGATGGCCAGGGGTaGCCCATTTCATCCCCACAG +
Preference number: 2 (lower is better)
Translates to: PFHPHRGISQPSGRHGSPSDGQG*PISSPQ
Trigger: CTGTGGGGATGAAATGGGGCACCCCTGGCCATCACT...TGGAGACCCGTGCCTTCCAGATGGCTGGGAGATGCCTCTGTGGGGATGAAATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
3UTR-3UTR CCA 90 bp TGGCTCCGGGTGGAGCAGTGGCTTCTCTTAGTAGAAGGAGATGCTGGATTTGCCTGGGCTCCTGCTCCTTaGCGGGGCCTGCTTTTCTGG +
Preference number: 2 (lower is better)
Translates to: WLRVEQWLLLVEGDAGFAWAPAP*RGLLFW
Trigger: CCAGAAAAGCAGGCCCCGCCAAGGAGCAGGAGCCCA...GGCAAATCCAGCATCTCCTTCTACTAAGAGAAGCCACTGCTCCACCCGGAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561516.5
ENST00000569765.5
3UTR-3UTR CCA 90 bp CTTCCAGTTCCTCTCAAACCTGGACTACACATGAGTGATGGCCAGGGGTGCCCCCATGGCTGTCGACTGTaGGCATGGGCTCCTGCTCCT +
Preference number: 2 (lower is better)
Translates to: LPVPLKPGLHMSDGQGCPHGCRL*AWAPAP
Trigger: AGGAGCAGGAGCCCATGCCCACAGTCGACAGCCATG...GGGGCACCCCTGGCCATCACTCATGTGTAGTCCAGGTTTGAGAGGAACTGGAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000561516.5
ENST00000569765.5
3UTR-3UTR TCA 90 bp CCATTTCATCCCCACAGAGGCATCTCCCAGCCATCTGGAAGGCACGGGTCTCCAGGCTACCCTATCTCTTaGGTTTCTGGTCTGGCTCCG +
Preference number: 2 (lower is better)
Translates to: PFHPHRGISQPSGRHGSPGYPIS*VSGLAP
Trigger: CGGAGCCAGACCAGAAACTCAAGAGATAGGGTAGCC...TGGAGACCCGTGCCTTCCAGATGGCTGGGAGATGCCTCTGTGGGGATGAAATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
3UTR-3UTR TCA 90 bp CTCCGGGTGGAGCAGTGGCTTCTCTTAGTAGAAGGAGATGCTGGATTTGCCTCCTCCAAGCAGCTGTCATaGCGGCCAGGAGACGCTGAG +
Preference number: 2 (lower is better)
Translates to: LRVEQWLLLVEGDAGFASSKQLS*RPGDAE
Trigger: CTCAGCGTCTCCTGGCCGTCATGACAGCTGCTTGGA...GGAGGCAAATCCAGCATCTCCTTCTACTAAGAGAAGCCACTGCTCCACCCGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561516.5
ENST00000569765.5
3UTR-3UTR TCA 90 bp ACCCAGAAGTCCCTGCCAGGGGCGGAAGTAAAGAGCTTTTCCTCTCACCTAGCGAACCTGGACTACACATaGGTGATGGCCAGGGGTGCC +
Preference number: 2 (lower is better)
Translates to: TQKSLPGAEVKSFSSHLANLDYT*VMARGA
Trigger: GGCACCCCTGGCCATCACTCATGTGTAGTCCAGGTT...CGCTAGGTGAGAGGAAAAGCTCTTTACTTCCGCCCCTGGCAGGGACTTCTGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
3UTR-3UTR GCA 90 bp CCCCTTCCAGTTCCTCTCAAACCTGGACTACACATGAGTGATGGCCAGGGGTGCAGTGATGGCCAGGGGTaGCCCATTTCATCCCCACAG +
Preference number: 2 (lower is better)
Translates to: PLPVPLKPGLHMSDGQGCSDGQG*PISSPQ
Trigger: CTGTGGGGATGAAATGGGGCACCCCTGGCCATCACT...GCACCCCTGGCCATCACTCATGTGTAGTCCAGGTTTGAGAGGAACTGGAAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
3UTR-3UTR GCA 90 bp AGCAGGGCTTGCATGCGCAGGAACTCTTCTTCTCCCAGTGAGCAGACTAAGCACTTGATCCAAGGACCATaGCCTGCCCCACCTCCCCAC +
Preference number: 2 (lower is better)
Translates to: SRACMRRNSSSPSEQTKHLIQGP*PAPPPH
Trigger: GTGGGGAGGTGGGGCAGGGCATGGTCCTTGGATCAA...GTGCTTAGTCTGCTCACTGGGAGAAGAAGAGTTCCTGCGCATGCAAGCCCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
3UTR-3UTR GCA 90 bp GTCATTCCTAGACATCCAATCAGCTGGCGGGCTGTTGATCCAAGGACCATGCCCTTGATCCAAGGACCATaGCCTGCCCCACCTCCCCAC +
Preference number: 2 (lower is better)
Translates to: VIPRHPISWRAVDPRTMPLIQGP*PAPPPH
Trigger: GTGGGGAGGTGGGGCAGGGCATGGTCCTTGGATCAA...GGGCATGGTCCTTGGATCAACAGCCCGCCAGCTGATTGGATGTCTAGGAATGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248098.8
ENST00000561516.5
ENST00000562684.5
3UTR-3UTR GCA 90 bp CCATTTCATCCCCACAGAGGCATCTCCCAGCCATCTGGAAGGCACGGGTCTCCAAGGAGATGCTGGATTTaGCTCCCGGTGGGTTCAGGA +
Preference number: 2 (lower is better)
Translates to: PFHPHRGISQPSGRHGSPRRCWI*LPVGSG
Trigger: TCCTGAACCCACCGGGAGGCAAATCCAGCATCTCCT...TGGAGACCCGTGCCTTCCAGATGGCTGGGAGATGCCTCTGTGGGGATGAAATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561516.5
ENST00000569765.5
3UTR-3UTR GCA 90 bp GGTTTGTTTGGGTGTGCCAAGCGTGAAGTGGCAGTGACCGGAGACCCAAAAATGCCAGGTGGGTTCAGGTaGTGTCGAGTCTGCACGGGG +
Preference number: 2 (lower is better)
Translates to: GLFGCAKREVAVTGDPKMPGGFR*CRVCTG
Trigger: CCCCGTGCAGACTCGACAGCACCTGAACCCACCTGG...CATTTTTGGGTCTCCGGTCACTGCCACTTCACGCTTGGCACACCCAAACAAACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566925.5
3UTR-3UTR CCA 90 bp CCCCTTCCAGTTCCTCTCAAACCTGGACTACACATGAGTGATGGCCAGGGGTGCCTTGAGTTTCTGGTCTaGCTCCGGGTGGAGCAGTGG +
Preference number: 2 (lower is better)
Translates to: PLPVPLKPGLHMSDGQGCLEFLV*LRVEQW
Trigger: CCACTGCTCCACCCGGAGCCAGACCAGAAACTCAAG...GCACCCCTGGCCATCACTCATGTGTAGTCCAGGTTTGAGAGGAACTGGAAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
3UTR-3UTR CCA 90 bp GTTTCTGCTTACGCCTCCTCCATCCCACAGCAGCAGTGGACAGGCTGTTTTGGTCATGGCTGTCGACTGTaGGCATGGGCTCCTGCTCCT +
Preference number: 2 (lower is better)
Translates to: VSAYASSIPQQQWTGCFGHGCRL*AWAPAP
Trigger: AGGAGCAGGAGCCCATGCCCACAGTCGACAGCCATG...ACCAAAACAGCCTGTCCACTGCTGCTGTGGGATGGAGGAGGCGTAAGCAGAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561516.5
3UTR-3UTR GCA 90 bp CCTCCCAAATGTAAACGACAGCCACACAGCAGGGCTTGCATGCGCAGGAACTCTTTGGCAGGCGGCTCCTaGAGGCACTTAAGCAGTGAG +
Preference number: 2 (lower is better)
Translates to: PPKCKRQPHSRACMRRNSLAGGS*RHLSSE
Trigger: CTCACTGCTTAAGTGCCTGCAGGAGCCGCCTGCCAA...AGAGTTCCTGCGCATGCAAGCCCTGCTGTGTGGCTGTCGTTTACATTTGGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
3UTR-3UTR GCA 90 bp CGTGAAGTGGCAGTGACCGGAGACCCAAAAATGTCGCTGGTCTTCCCTCCAGGTAGGTGCTGTCGAGTCTaGACGGGGGTTGATTCGTCA +
Preference number: 2 (lower is better)
Translates to: REVAVTGDPKMSLVFPPGRCCRV*TGVDSS
Trigger: TGACGAATCAACCCCCGTGCAGACTCGACAGCACCT...ACCTGGAGGGAAGACCAGCGACATTTTTGGGTCTCCGGTCACTGCCACTTCACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000566925.5
3UTR-3UTR CCA 90 bp CCATTTCATCCCCACAGAGGCATCTCCCAGCCATCTGGAAGGCACGGGTCTCCATATCTCTTGAGTTTCTaGTCTGGCTCCGGGTGGAGC +
Preference number: 2 (lower is better)
Translates to: PFHPHRGISQPSGRHGSPYLLSF*SGSGWS
Trigger: GCTCCACCCGGAGCCAGACCAGAAACTCAAGAGATA...TGGAGACCCGTGCCTTCCAGATGGCTGGGAGATGCCTCTGTGGGGATGAAATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
3UTR-3UTR TCA 90 bp AAATCTTCCAAATACAGGCAGTCCCCAACGTACAGACATACAGGACACCTCCCACACCCAAGGGCAGCATaGGAACTGGGCCTGCAGCCC +
Preference number: 2 (lower is better)
Translates to: KSSKYRQSPTYRHTGHLPHPRAA*ELGLQP
Trigger: GGGCTGCAGGCCCAGTTCTCATGCTGCCCTTGGGTG...TGGGAGGTGTCCTGTATGTCTGTACGTTGGGGACTGCCTGTATTTGGAAGATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
3UTR-3UTR TCA 90 bp AAGCACAAACCACCTGAAGTGTGTGTAGAGTCACACAGAGTGTTTCTTGGCTCCCACCCAAGGGCAGCATaGGAACTGGGCCTGCAGCCC +
Preference number: 2 (lower is better)
Translates to: KHKPPEVCVESHRVFLGSHPRAA*ELGLQP
Trigger: GGGCTGCAGGCCCAGTTCTCATGCTGCCCTTGGGTG...GGAGCCAAGAAACACTCTGTGTGACTCTACACACACTTCAGGTGGTTTGTGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
3UTR-3UTR GCA 90 bp AGCAGGGCTTGCATGCGCAGGAACTCTTCTTCTCCCAGTGAGCAGACTAAGCACTCTCACCTAGCGGACTaGAAGGGCTGGGAGAATCAC +
Preference number: 2 (lower is better)
Translates to: SRACMRRNSSSPSEQTKHSHLAD*KGWENH
Trigger: GTGATTCTCCCAGCCCTTGCAGTCCGCTAGGTGAGA...GTGCTTAGTCTGCTCACTGGGAGAAGAAGAGTTCCTGCGCATGCAAGCCCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
3UTR-3UTR GCA 90 bp GCTGTCGAGTCTGCACGGGGGTTGATTCGTCAAAGATACCACTTCCTTTACCCCTTTCTCACCTGGCTCTaGTCCAGCCGGGATGCTCCT +
Preference number: 2 (lower is better)
Translates to: AVESARGLIRQRYHFLYPFLTWL*SSRDAP
Trigger: AGGAGCATCCCGGCTGGAGCAGAGCCAGGTGAGAAA...GGGGTAAAGGAAGTGGTATCTTTGACGAATCAACCCCCGTGCAGACTCGACAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566925.5
3UTR-3UTR GCA 90 bp CTTGAGTTTCTGGTCTGGCTCCGGGTGGAGCAGTGGCTTCTCTTAGTAGAAGGATTTCTCACCTGGCTCTaGTCCAGCCGGGATGCTCCT +
Preference number: 2 (lower is better)
Translates to: LEFLVWLRVEQWLLLVEGFLTWL*SSRDAP
Trigger: AGGAGCATCCCGGCTGGAGCAGAGCCAGGTGAGAAA...TCCTTCTACTAAGAGAAGCCACTGCTCCACCCGGAGCCAGACCAGAAACTCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561516.5
ENST00000569765.5
3UTR-3UTR CCA 90 bp CCCCTTCCAGTTCCTCTCAAACCTGGACTACACATGAGTGATGGCCAGGGGTGCTATCTCTTGAGTTTCTaGTCTGGCTCCGGGTGGAGC +
Preference number: 2 (lower is better)
Translates to: PLPVPLKPGLHMSDGQGCYLLSF*SGSGWS
Trigger: GCTCCACCCGGAGCCAGACCAGAAACTCAAGAGATA...GCACCCCTGGCCATCACTCATGTGTAGTCCAGGTTTGAGAGGAACTGGAAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
3UTR-3UTR CCA 90 bp GCTACCCTATCTCTTGAGTTTCTGGTCTGGCTCCGGGTGGAGCAGTGGCTTCTCAGTAGAAGGAGATGCTaGATTTGCCTCCCGGTGGGT +
Preference number: 2 (lower is better)
Translates to: ATLSLEFLVWLRVEQWLLSRRRC*ICLPVG
Trigger: ACCCACCGGGAGGCAAATCCAGCATCTCCTTCTACT...GAGAAGCCACTGCTCCACCCGGAGCCAGACCAGAAACTCAAGAGATAGGGTAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561516.5
ENST00000569765.5
3UTR-3UTR TCA 90 bp GCCCTGTGTGAAAGACAGGCAGATTCCAACATGAGATCAGATCAGGCCGAGGTTTGGACTACACATGAGTaGTGGCCAGGGGTGCCCCAT +
Preference number: 2 (lower is better)
Translates to: ALCERQADSNMRSDQAEVWTTHE*WPGVPH
Trigger: ATGGGGCACCCCTGGCCATCACTCATGTGTAGTCCA...AACCTCGGCCTGATCTGATCTCATGTTGGAATCTGCCTGTCTTTCACACAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
3UTR-3UTR TCA 90 bp CTACAGGCAATCAAAAGGGGGAAGCTGTCTTTGGTTGACAAAGCCTTGTGCAGACAGCTGGCGGGCTGTTaGTCCAAGGACCATGCCCTG +
Preference number: 2 (lower is better)
Translates to: LQAIKRGKLSLVDKALCRQLAGC*SKDHAL
Trigger: CAGGGCATGGTCCTTGGATCAACAGCCCGCCAGCTG...TCTGCACAAGGCTTTGTCAACCAAAGACAGCTTCCCCCTTTTGATTGCCTGTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
3UTR-3UTR GCA 90 bp ACCCTATCTCTTGAGTTTCTGGTCTGGCTCCGGGTGGAGCAGTGGCTTCTCTTACTGCTTTTCTGGCGCTaGCTTTCTCACCTGGCTCTG +
Preference number: 2 (lower is better)
Translates to: TLSLEFLVWLRVEQWLLLLLFWR*LSHLAL
Trigger: CAGAGCCAGGTGAGAAAGGCAGCGCCAGAAAAGCAG...TAAGAGAAGCCACTGCTCCACCCGGAGCCAGACCAGAAACTCAAGAGATAGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561516.5
ENST00000569765.5
3UTR-3UTR CCA 90 bp GTCATTCCTAGACATCCAATCAGCTGGCGGGCTGTTGATCCAAGGACCATGCCCAGTAGAAGGAGATGCTaGATTTGCCTCCCGGTGGGT +
Preference number: 2 (lower is better)
Translates to: VIPRHPISWRAVDPRTMPSRRRC*ICLPVG
Trigger: ACCCACCGGGAGGCAAATCCAGCATCTCCTTCTACT...GGGCATGGTCCTTGGATCAACAGCCCGCCAGCTGATTGGATGTCTAGGAATGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561516.5
3UTR-3UTR TCA 90 bp AAGCGTGAAGTGGCAGTGACCGGAGACCCAAAAATGTCGCTGGTCTTCCCTCCAAGTCTGCACGGGGGTTaGTTCGTCAAAGATACCACT +
Preference number: 2 (lower is better)
Translates to: KREVAVTGDPKMSLVFPPSLHGG*FVKDTT
Trigger: AGTGGTATCTTTGACGAATCAACCCCCGTGCAGACT...TGGAGGGAAGACCAGCGACATTTTTGGGTCTCCGGTCACTGCCACTTCACGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000566925.5
3UTR-3UTR CCA 90 bp GGCTCACATAAGACTAACCCTCTTCCCACCCCGCTCATTTGGGCAAAAGGAAATCTTGAGTTTCTGGTCTaGCTCCGGGTGGAGCAGTGG +
Preference number: 2 (lower is better)
Translates to: GSHKTNPLPTPLIWAKGNLEFLV*LRVEQW
Trigger: CCACTGCTCCACCCGGAGCCAGACCAGAAACTCAAG...ATTTCCTTTTGCCCAAATGAGCGGGGTGGGAAGAGGGTTAGTCTTATGTGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
3UTR-3UTR CCA 90 bp CACGGGTCTCCAAGCAGCTGTCATGACGGCCAGGAGACGCTGAGCAGCCAGGCTAAGGAAATGAAAACATaGCTACCCTATCTCTTGAGT +
Preference number: 2 (lower is better)
Translates to: HGSPSSCHDGQETLSSQAKEMKT*LPYLLS
Trigger: ACTCAAGAGATAGGGTAGCCATGTTTTCATTTCCTT...AGCCTGGCTGCTCAGCGTCTCCTGGCCGTCATGACAGCTGCTTGGAGACCCGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
3UTR-3UTR CCA 90 bp CCTCCCAAATGTAAACGACAGCCACACAGCAGGGCTTGCATGCGCAGGAACTCTGGGGGAAGCTGTCTTTaGTTGACAAAGCCTTGTGCA +
Preference number: 2 (lower is better)
Translates to: PPKCKRQPHSRACMRRNSGGSCL*LTKPCA
Trigger: TGCACAAGGCTTTGTCAACCAAAGACAGCTTCCCCC...AGAGTTCCTGCGCATGCAAGCCCTGCTGTGTGGCTGTCGTTTACATTTGGGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
3UTR-3UTR TCA 90 bp GCTCACATAAGACTAACCCTCTTCCCACCCCGCTCATTTGGGCAAAAGGAAATGGGCTACCCTATCTCTTaGGTTTCTGGTCTGGCTCCG +
Preference number: 2 (lower is better)
Translates to: AHIRLTLFPPRSFGQKEMGYPIS*VSGLAP
Trigger: CGGAGCCAGACCAGAAACTCAAGAGATAGGGTAGCC...CATTTCCTTTTGCCCAAATGAGCGGGGTGGGAAGAGGGTTAGTCTTATGTGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
3UTR-3UTR TCA 90 bp CTACAGGCAATCAAAAGGGGGAAGCTGTCTTTGGTTGACAAAGCCTTGTGCAGAAACCTGGACTACACATaGGTGATGGCCAGGGGTGCC +
Preference number: 2 (lower is better)
Translates to: LQAIKRGKLSLVDKALCRNLDYT*VMARGA
Trigger: GGCACCCCTGGCCATCACTCATGTGTAGTCCAGGTT...TCTGCACAAGGCTTTGTCAACCAAAGACAGCTTCCCCCTTTTGATTGCCTGTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
3UTR-3UTR TCA 90 bp CCTCCCAAATGTAAACGACAGCCACACAGCAGGGCTTGCATGCGCAGGAACTCTGAAGCACAAACCACCTaGAGTGTGTGTAGAGTCACA +
Preference number: 2 (lower is better)
Translates to: PPKCKRQPHSRACMRRNSEAQTT*SVCRVT
Trigger: TGTGACTCTACACACACTTCAGGTGGTTTGTGCTTC...AGAGTTCCTGCGCATGCAAGCCCTGCTGTGTGGCTGTCGTTTACATTTGGGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
3UTR-3UTR GCA 90 bp CTACAGGCAATCAAAAGGGGGAAGCTGTCTTTGGTTGACAAAGCCTTGTGCAGACACTCAGAGCAAAGCTaGTGCCGCCACCCAGACGTT +
Preference number: 2 (lower is better)
Translates to: LQAIKRGKLSLVDKALCRHSEQS*CRHPDV
Trigger: AACGTCTGGGTGGCGGCAGCAGCTTTGCTCTGAGTG...TCTGCACAAGGCTTTGTCAACCAAAGACAGCTTCCCCCTTTTGATTGCCTGTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
3UTR-3UTR CCA 90 bp GCCCTGTGTGAAAGACAGGCAGATTCCAACATGAGATCAGATCAGGCCGAGGTTAGACATCCAATCAGCTaGCGGGCTGTTGATCCAAGG +
Preference number: 2 (lower is better)
Translates to: ALCERQADSNMRSDQAEVRHPIS*RAVDPR
Trigger: CCTTGGATCAACAGCCCGCCAGCTGATTGGATGTCT...AACCTCGGCCTGATCTGATCTCATGTTGGAATCTGCCTGTCTTTCACACAGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
3UTR-3UTR CCA 90 bp CCTCCCAAATGTAAACGACAGCCACACAGCAGGGCTTGCATGCGCAGGAACTCTAACTCCTTCATCTCCTaGCCTAAGGTCTCTAGTCTC +
Preference number: 2 (lower is better)
Translates to: PPKCKRQPHSRACMRRNSNSFIS*PKVSSL
Trigger: GAGACTAGAGACCTTAGGCCAGGAGATGAAGGAGTT...AGAGTTCCTGCGCATGCAAGCCCTGCTGTGTGGCTGTCGTTTACATTTGGGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
3UTR-3UTR CCA 90 bp CGTGAAGTGGCAGTGACCGGAGACCCAAAAATGTCGCTGGTCTTCCCTCCAGGTGGGGATTTGTCCTCTTaGGTATGTTCTGAGGTTCTT +
Preference number: 2 (lower is better)
Translates to: REVAVTGDPKMSLVFPPGGDLSS*VCSEVL
Trigger: AAGAACCTCAGAACATACCCAAGAGGACAAATCCCC...ACCTGGAGGGAAGACCAGCGACATTTTTGGGTCTCCGGTCACTGCCACTTCACG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566925.5
3UTR-3UTR CCA 90 bp CAAAGTCTACAGGCAATCAAAAGGGGGAAGCTGTCTTTGGTTGACAAAGCCTTGCTTGAGTTTCTGGTCTaGCTCCGGGTGGAGCAGTGG +
Preference number: 2 (lower is better)
Translates to: QSLQAIKRGKLSLVDKALLEFLV*LRVEQW
Trigger: CCACTGCTCCACCCGGAGCCAGACCAGAAACTCAAG...CAAGGCTTTGTCAACCAAAGACAGCTTCCCCCTTTTGATTGCCTGTAGACTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
3UTR-3UTR CCA 90 bp GCTCACATAAGACTAACCCTCTTCCCACCCCGCTCATTTGGGCAAAAGGAAATGTATCTCTTGAGTTTCTaGTCTGGCTCCGGGTGGAGC +
Preference number: 2 (lower is better)
Translates to: AHIRLTLFPPRSFGQKEMYLLSF*SGSGWS
Trigger: GCTCCACCCGGAGCCAGACCAGAAACTCAAGAGATA...CATTTCCTTTTGCCCAAATGAGCGGGGTGGGAAGAGGGTTAGTCTTATGTGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
3UTR-3UTR CCA 90 bp GTGCCCCATTTCATCCCCACAGAGGCATCTCCCAGCCATCTGGAAGGCACGGGTAAGGAAATGAAAACATaGCTACCCTATCTCTTGAGT +
Preference number: 2 (lower is better)
Translates to: VPHFIPTEASPSHLEGTGKEMKT*LPYLLS
Trigger: ACTCAAGAGATAGGGTAGCCATGTTTTCATTTCCTT...ACCCGTGCCTTCCAGATGGCTGGGAGATGCCTCTGTGGGGATGAAATGGGGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
3UTR-3UTR TCA 90 bp CAAAGTCTACAGGCAATCAAAAGGGGGAAGCTGTCTTTGGTTGACAAAGCCTTGGGCTACCCTATCTCTTaGGTTTCTGGTCTGGCTCCG +
Preference number: 2 (lower is better)
Translates to: QSLQAIKRGKLSLVDKALGYPIS*VSGLAP
Trigger: CGGAGCCAGACCAGAAACTCAAGAGATAGGGTAGCC...CAAGGCTTTGTCAACCAAAGACAGCTTCCCCCTTTTGATTGCCTGTAGACTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
3UTR-3UTR GCA 90 bp CTACAGGCAATCAAAAGGGGGAAGCTGTCTTTGGTTGACAAAGCCTTGTGCAGATCCTCTGTTAACAGATaGCCACCCAAGGGCAGCATG +
Preference number: 2 (lower is better)
Translates to: LQAIKRGKLSLVDKALCRSSVNR*PPKGSM
Trigger: CATGCTGCCCTTGGGTGGGCATCTGTTAACAGAGGA...TCTGCACAAGGCTTTGTCAACCAAAGACAGCTTCCCCCTTTTGATTGCCTGTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
3UTR-3UTR CCA 90 bp GTCATTCCTAGACATCCAATCAGCTGGCGGGCTGTTGATCCAAGGACCATGCCCGTGGACAGGCTGTTTTaGTTTCTTTCAGTCATTCCT +
Preference number: 2 (lower is better)
Translates to: VIPRHPISWRAVDPRTMPVDRLF*FLSVIP
Trigger: AGGAATGACTGAAAGAAACCAAAACAGCCTGTCCAC...GGGCATGGTCCTTGGATCAACAGCCCGCCAGCTGATTGGATGTCTAGGAATGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248098.8
ENST00000561516.5
ENST00000562684.5
3UTR-3UTR CCA 90 bp CAAAGTCTACAGGCAATCAAAAGGGGGAAGCTGTCTTTGGTTGACAAAGCCTTGGGCCGAGGTTTCAGATaGCAGGAACTGGGCACTTCA +
Preference number: 2 (lower is better)
Translates to: QSLQAIKRGKLSLVDKALGRGFR*QELGTS
Trigger: TGAAGTGCCCAGTTCCTGCCATCTGAAACCTCGGCC...CAAGGCTTTGTCAACCAAAGACAGCTTCCCCCTTTTGATTGCCTGTAGACTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
3UTR-3UTR CCA 90 bp CACATAAGACTAACCCTCTTCCCACCCCGCTCATTTGGGCAAAAGGAAATGAAATATCTCTTGAGTTTCTaGTCTGGCTCCGGGTGGAGC +
Preference number: 2 (lower is better)
Translates to: HIRLTLFPPRSFGQKEMKYLLSF*SGSGWS
Trigger: GCTCCACCCGGAGCCAGACCAGAAACTCAAGAGATA...TTTCATTTCCTTTTGCCCAAATGAGCGGGGTGGGAAGAGGGTTAGTCTTATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
3UTR-3UTR CCA 90 bp CTTCCAGTTCCTCTCAAACCTGGACTACACATGAGTGATGGCCAGGGGTGCCCCAAGGAAATGAAAACATaGCTACCCTATCTCTTGAGT +
Preference number: 2 (lower is better)
Translates to: LPVPLKPGLHMSDGQGCPKEMKT*LPYLLS
Trigger: ACTCAAGAGATAGGGTAGCCATGTTTTCATTTCCTT...GGGGCACCCCTGGCCATCACTCATGTGTAGTCCAGGTTTGAGAGGAACTGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
3UTR-3UTR CCA 90 bp CCTCCCAAATGTAAACGACAGCCACACAGCAGGGCTTGCATGCGCAGGAACTCTAAGGAAATGAAAACATaGCTACCCTATCTCTTGAGT +
Preference number: 2 (lower is better)
Translates to: PPKCKRQPHSRACMRRNSKEMKT*LPYLLS
Trigger: ACTCAAGAGATAGGGTAGCCATGTTTTCATTTCCTT...AGAGTTCCTGCGCATGCAAGCCCTGCTGTGTGGCTGTCGTTTACATTTGGGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
3UTR-3UTR CCA 90 bp CTCCGGGTGGAGCAGTGGCTTCTCTTAGTAGAAGGAGATGCTGGATTTGCCTCCAAGGAAATGAAAACATaGCTACCCTATCTCTTGAGT +
Preference number: 2 (lower is better)
Translates to: LRVEQWLLLVEGDAGFASKEMKT*LPYLLS
Trigger: ACTCAAGAGATAGGGTAGCCATGTTTTCATTTCCTT...GGAGGCAAATCCAGCATCTCCTTCTACTAAGAGAAGCCACTGCTCCACCCGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561516.5
ENST00000569765.5
3UTR-3UTR CCA 90 bp ATCTCCAGAATGGAAGCGGTTCTGCTAAGAGGTCAATATACTGTTAGTGTTTCTAGACATCCAATCAGCTaGCGGGCTGTTGATCCAAGG +
Preference number: 2 (lower is better)
Translates to: ISRMEAVLLRGQYTVSVSRHPIS*RAVDPR
Trigger: CCTTGGATCAACAGCCCGCCAGCTGATTGGATGTCT...AGAAACACTAACAGTATATTGACCTCTTAGCAGAACCGCTTCCATTCTGGAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248098.8
ENST00000561516.5
ENST00000562684.5
3UTR-3UTR CCA 90 bp AAGCACAAACCACCTGAAGTGTGTGTAGAGTCACACAGAGTGTTTCTTGGCTCCGTCTCTAGTCTCTTCTaGAAGCTTGTTTGTGAGTTA +
Preference number: 2 (lower is better)
Translates to: KHKPPEVCVESHRVFLGSVSSLF*KLVCEL
Trigger: TAACTCACAAACAAGCTTCCAGAAGAGACTAGAGAC...GGAGCCAAGAAACACTCTGTGTGACTCTACACACACTTCAGGTGGTTTGTGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
3UTR-3UTR CCA 90 bp CAAAGTCTACAGGCAATCAAAAGGGGGAAGCTGTCTTTGGTTGACAAAGCCTTGATTCACAAGCAAAACTaGCATGTAAAGGACCAAGAC +
Preference number: 2 (lower is better)
Translates to: QSLQAIKRGKLSLVDKALIHKQN*HVKDQD
Trigger: GTCTTGGTCCTTTACATGCCAGTTTTGCTTGTGAAT...CAAGGCTTTGTCAACCAAAGACAGCTTCCCCCTTTTGATTGCCTGTAGACTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
3UTR GCA 72 bp GACTGTGGGCATGGGCTCCTGCTCCTTGGCGGGGCCTaGTTTTCTGGCGCTGCCTTTCTCACCTGGCTCTGC +
Preference number: 3 (lower is better)
Translates to: DCGHGLLLLGGA*FSGAAFLTWLC
Trigger: GCAGAGCCAGGTGAGAAAGGCAGCGCCAGAAAAGCAGGCCCCGCCAAGGAGCAGGAGCCCATGCCCACAGTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561516.5
ENST00000569765.5
3UTR-3UTR CAA 90 bp ACCCAGAAGTCCCTGCCAGGGGCGGAAGTAAAGAGCTTTTCCTCTCACCTAGCGCTGGGCCTGCAGCCCTaGAGGGGGATGGGCAGAGGC +
Preference number: 3 (lower is better)
Translates to: TQKSLPGAEVKSFSSHLALGLQP*RGMGRG
Trigger: GCCTCTGCCCATCCCCCTCAAGGGCTGCAGGCCCAG...CGCTAGGTGAGAGGAAAAGCTCTTTACTTCCGCCCCTGGCAGGGACTTCTGGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
3UTR TCA 72 bp GAGCTTGGCAGGCGGCTCCTGCAGGCACTTAAGCAGTaGGGCAGCATGAGCCTGACTGAACATGGCTGCTGC +
Preference number: 3 (lower is better)
Translates to: ELGRRLLQALKQ*GSMSLTEHGCC
Trigger: GCAGCAGCCATGTTCAGTCAGGCTCATGCTGCCTCACTGCTTAAGTGCCTGCAGGAGCCGCCTGCCAAGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
3UTR GCA 72 bp GGCCTGCAGCCCTTGAGGGGGATGGGCAGAGGCTTCTaGCTGAAGATGAAAGCACCACCACCTTTGCCATCC +
Preference number: 3 (lower is better)
Translates to: GLQPLRGMGRGF*LKMKAPPPLPS
Trigger: GGATGGCAAAGGTGGTGGTGCTTTCATCTTCAGGCAGAAGCCTCTGCCCATCCCCCTCAAGGGCTGCAGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
3UTR GCA 72 bp GCTGCCGCCACCCAGACGTTCTCCTCTGTTAACAGATaGCCACCCAAGGGCAGCATGAGAACTGGGCCTGCA +
Preference number: 3 (lower is better)
Translates to: AAATQTFSSVNR*PPKGSMRTGPA
Trigger: TGCAGGCCCAGTTCTCATGCTGCCCTTGGGTGGGCATCTGTTAACAGAGGAGAACGTCTGGGTGGCGGCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
3UTR-3UTR CAA 90 bp GGGTGCCCCATTTCATCCCCACAGAGGCATCTCCCAGCCATCTGGAAGGCACGGTGGCTACCCTATCTCTaGAGTTTCTGGTCTGGCTCC +
Preference number: 3 (lower is better)
Translates to: GCPISSPQRHLPAIWKARWLPYL*SFWSGS
Trigger: GGAGCCAGACCAGAAACTCAAGAGATAGGGTAGCCA...CCGTGCCTTCCAGATGGCTGGGAGATGCCTCTGTGGGGATGAAATGGGGCACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
3UTR-3UTR CAA 90 bp ACCCAGAAGTCCCTGCCAGGGGCGGAAGTAAAGAGCTTTTCCTCTCACCTAGCGTCAGCTGGCGGGCTGTaGATCCAAGGACCATGCCCT +
Preference number: 3 (lower is better)
Translates to: TQKSLPGAEVKSFSSHLASAGGL*IQGPCP
Trigger: AGGGCATGGTCCTTGGATCAACAGCCCGCCAGCTGA...CGCTAGGTGAGAGGAAAAGCTCTTTACTTCCGCCCCTGGCAGGGACTTCTGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
3UTR-3UTR CAA 90 bp CCATTTCATCCCCACAGAGGCATCTCCCAGCCATCTGGAAGGCACGGGTCTCCAAAGGAGATGCTGGATTaGCCTCCCGGTGGGTTCAGG +
Preference number: 3 (lower is better)
Translates to: PFHPHRGISQPSGRHGSPKEMLD*PPGGFR
Trigger: CCTGAACCCACCGGGAGGCAAATCCAGCATCTCCTT...TGGAGACCCGTGCCTTCCAGATGGCTGGGAGATGCCTCTGTGGGGATGAAATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561516.5
ENST00000569765.5
3UTR-3UTR CAA 90 bp GTGCCCCATTTCATCCCCACAGAGGCATCTCCCAGCCATCTGGAAGGCACGGGTTGGCTACCCTATCTCTaGAGTTTCTGGTCTGGCTCC +
Preference number: 3 (lower is better)
Translates to: VPHFIPTEASPSHLEGTGWLPYL*SFWSGS
Trigger: GGAGCCAGACCAGAAACTCAAGAGATAGGGTAGCCA...ACCCGTGCCTTCCAGATGGCTGGGAGATGCCTCTGTGGGGATGAAATGGGGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
3UTR GCA 72 bp CTCAAACCTGGACTACACATGAGTGATGGCCAGGGGTaGCCCATTTCATCCCCACAGAGGCATCTCCCAGCC +
Preference number: 3 (lower is better)
Translates to: LKPGLHMSDGQG*PISSPQRHLPA
Trigger: GGCTGGGAGATGCCTCTGTGGGGATGAAATGGGGCACCCCTGGCCATCACTCATGTGTAGTCCAGGTTTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
3UTR CCA 72 bp CTCTTAGTAGAAGGAGATGCTGGATTTGCCTCCCGGTaGGTTCAGGACCTTGTTGTGAGAGCGAGGCCGCGG +
Preference number: 3 (lower is better)
Translates to: LLVEGDAGFASR*VQDLVVRARPR
Trigger: CCGCGGCCTCGCTCTCACAACAAGGTCCTGAACCCACCGGGAGGCAAATCCAGCATCTCCTTCTACTAAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561516.5
ENST00000569765.5
3UTR-3UTR CAA 90 bp CCATTTCATCCCCACAGAGGCATCTCCCAGCCATCTGGAAGGCACGGGTCTCCATGGCTACCCTATCTCTaGAGTTTCTGGTCTGGCTCC +
Preference number: 3 (lower is better)
Translates to: PFHPHRGISQPSGRHGSPWLPYL*SFWSGS
Trigger: GGAGCCAGACCAGAAACTCAAGAGATAGGGTAGCCA...TGGAGACCCGTGCCTTCCAGATGGCTGGGAGATGCCTCTGTGGGGATGAAATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
3UTR-3UTR CAA 90 bp ACCCAGAAGTCCCTGCCAGGGGCGGAAGTAAAGAGCTTTTCCTCTCACCTAGCGTTGGTTGACAAAGCCTaGTGCAGACCCCAGTGTGCC +
Preference number: 3 (lower is better)
Translates to: TQKSLPGAEVKSFSSHLALVDKA*CRPQCA
Trigger: GGCACACTGGGGTCTGCACAAGGCTTTGTCAACCAA...CGCTAGGTGAGAGGAAAAGCTCTTTACTTCCGCCCCTGGCAGGGACTTCTGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
3UTR GCA 72 bp GCGGAAGTAAAGAGCTTTTCCTCTCACCTAGCGGACTaGAAGGGCTGGGAGAATCACAGGGCCCAGTACCGT +
Preference number: 3 (lower is better)
Translates to: AEVKSFSSHLAD*KGWENHRAQYR
Trigger: ACGGTACTGGGCCCTGTGATTCTCCCAGCCCTTGCAGTCCGCTAGGTGAGAGGAAAAGCTCTTTACTTCCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
3UTR GCA 72 bp CCGGGTGGAGCAGTGGCTTCTCTTAGTAGAAGGAGATaGTGGATTTGCCTCCCGGTGGGTTCAGGACCTTGT +
Preference number: 3 (lower is better)
Translates to: PGGAVASLSRRR*WICLPVGSGPC
Trigger: ACAAGGTCCTGAACCCACCGGGAGGCAAATCCAGCATCTCCTTCTACTAAGAGAAGCCACTGCTCCACCCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561516.5
ENST00000569765.5
3UTR CCA 72 bp AAGAGCTTTTCCTCTCACCTAGCGGACTGCAAGGGCTaGGAGAATCACAGGGCCCAGTACCGTCACGTCCTA +
Preference number: 3 (lower is better)
Translates to: KSFSSHLADCKG*ENHRAQYRHVL
Trigger: TAGGACGTGACGGTACTGGGCCCTGTGATTCTCCCAGCCCTTGCAGTCCGCTAGGTGAGAGGAAAAGCTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
3UTR-3UTR CAA 90 bp CTTCCAGTTCCTCTCAAACCTGGACTACACATGAGTGATGGCCAGGGGTGCCCCTGGCTACCCTATCTCTaGAGTTTCTGGTCTGGCTCC +
Preference number: 3 (lower is better)
Translates to: LPVPLKPGLHMSDGQGCPWLPYL*SFWSGS
Trigger: GGAGCCAGACCAGAAACTCAAGAGATAGGGTAGCCA...GGGGCACCCCTGGCCATCACTCATGTGTAGTCCAGGTTTGAGAGGAACTGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
3UTR-3UTR CAA 90 bp GCTACCCTATCTCTTGAGTTTCTGGTCTGGCTCCGGGTGGAGCAGTGGCTTCTCTGGCTACCCTATCTCTaGAGTTTCTGGTCTGGCTCC +
Preference number: 3 (lower is better)
Translates to: ATLSLEFLVWLRVEQWLLWLPYL*SFWSGS
Trigger: GGAGCCAGACCAGAAACTCAAGAGATAGGGTAGCCA...GAGAAGCCACTGCTCCACCCGGAGCCAGACCAGAAACTCAAGAGATAGGGTAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
3UTR-3UTR CAA 90 bp TCCTTGGGTTTGTTTGGGTGTGCCAAGCGTGAAGTGGCAGTGACCGGAGACCCAGAGTCTGCACGGGGGTaGATTCGTCAAAGATACCAC +
Preference number: 3 (lower is better)
Translates to: SLGLFGCAKREVAVTGDPESARG*IRQRYH
Trigger: GTGGTATCTTTGACGAATCAACCCCCGTGCAGACTC...TGGGTCTCCGGTCACTGCCACTTCACGCTTGGCACACCCAAACAAACCCAAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566925.5
3UTR TCA 72 bp CACCCTGGCCTCCCAAAGACCCAAAGACTACAGACCTaGGCCACCATGCCCACCTGTTTTCTTGACAGGACT +
Preference number: 3 (lower is better)
Translates to: HPGLPKTQRLQT*ATMPTCFLDRT
Trigger: AGTCCTGTCAAGAAAACAGGTGGGCATGGTGGCTCAGGTCTGTAGTCTTTGGGTCTTTGGGAGGCCAGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000248098.8
3UTR TCA 72 bp TGGGTTTGTTTGGGTGTGCCAAGCGTGAAGTGGCAGTaGCCGGAGACCCAAAAATGTCGCTGGTCTTCCCTC +
Preference number: 3 (lower is better)
Translates to: WVCLGVPSVKWQ*PETQKCRWSSL
Trigger: GAGGGAAGACCAGCGACATTTTTGGGTCTCCGGTCACTGCCACTTCACGCTTGGCACACCCAAACAAACCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566925.5
3UTR GCA 72 bp CCTCCCAAATGTAAACGACAGCCACACAGCAGGGCTTaGATGCGCAGGAACTCTTCTTCTCCCAGTGAGCAG +
Preference number: 3 (lower is better)
Translates to: PPKCKRQPHSRA*MRRNSSSPSEQ
Trigger: CTGCTCACTGGGAGAAGAAGAGTTCCTGCGCATGCAAGCCCTGCTGTGTGGCTGTCGTTTACATTTGGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
3UTR GCA 72 bp GTCTTCCCTCCAGGTGGGTTCAGGTGCTGTCGAGTCTaGACGGGGGTTGATTCGTCAAAGATACCACTTCCT +
Preference number: 3 (lower is better)
Translates to: VFPPGGFRCCRV*TGVDSSKIPLP
Trigger: AGGAAGTGGTATCTTTGACGAATCAACCCCCGTGCAGACTCGACAGCACCTGAACCCACCTGGAGGGAAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566925.5
3UTR GCA 72 bp AAAATGTCGCTGGTCTTCCCTCCAGGTGGGTTCAGGTaGTGTCGAGTCTGCACGGGGGTTGATTCGTCAAAG +
Preference number: 3 (lower is better)
Translates to: KMSLVFPPGGFR*CRVCTGVDSSK
Trigger: CTTTGACGAATCAACCCCCGTGCAGACTCGACAGCACCTGAACCCACCTGGAGGGAAGACCAGCGACATTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566925.5
3UTR CCA 72 bp TTCCAACATGAGATCAGATCAGGCCGAGGTTTCAGATaGCAGGAACTGGGCACTTCAGAGGGTCAGGGCACC +
Preference number: 3 (lower is better)
Translates to: FQHEIRSGRGFR*QELGTSEGQGT
Trigger: GGTGCCCTGACCCTCTGAAGTGCCCAGTTCCTGCCATCTGAAACCTCGGCCTGATCTGATCTCATGTTGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
3UTR GCA 72 bp GCAGTGGCTTCTCTTAGTAGAAGGAGATGCTGGATTTaGCTCCCGGTGGGTTCAGGACCTTGTTGTGAGAGC +
Preference number: 3 (lower is better)
Translates to: AVASLSRRRCWI*LPVGSGPCCES
Trigger: GCTCTCACAACAAGGTCCTGAACCCACCGGGAGGCAAATCCAGCATCTCCTTCTACTAAGAGAAGCCACTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561516.5
ENST00000569765.5
3UTR CCA 72 bp TGGTTTCTTTCAGTCATTCCTAGACATCCAATCAGCTaGCGGGCTGTTGATCCAAGGACCATGCCCTGCCCC +
Preference number: 3 (lower is better)
Translates to: WFLSVIPRHPIS*RAVDPRTMPCP
Trigger: GGGGCAGGGCATGGTCCTTGGATCAACAGCCCGCCAGCTGATTGGATGTCTAGGAATGACTGAAAGAAACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248098.8
ENST00000561516.5
ENST00000562684.5
3UTR CCA 72 bp GGTGGAGCAGTGGCTTCTCTTAGTAGAAGGAGATGCTaGATTTGCCTCCCGGTGGGTTCAGGACCTTGTTGT +
Preference number: 3 (lower is better)
Translates to: GGAVASLSRRRC*ICLPVGSGPCC
Trigger: ACAACAAGGTCCTGAACCCACCGGGAGGCAAATCCAGCATCTCCTTCTACTAAGAGAAGCCACTGCTCCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561516.5
ENST00000569765.5
3UTR-3UTR CAA 90 bp CCTCCCAAATGTAAACGACAGCCACACAGCAGGGCTTGCATGCGCAGGAACTCTGCAAAGCTCAGGGAATaGGACAGGTGTGACTTTGCT +
Preference number: 3 (lower is better)
Translates to: PPKCKRQPHSRACMRRNSAKLRE*DRCDFA
Trigger: AGCAAAGTCACACCTGTCCAATTCCCTGAGCTTTGC...AGAGTTCCTGCGCATGCAAGCCCTGCTGTGTGGCTGTCGTTTACATTTGGGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
3UTR-3UTR CAA 90 bp GGTTTGTTTGGGTGTGCCAAGCGTGAAGTGGCAGTGACCGGAGACCCAAAAATGTACCCCCTGGGGGATTaGTCCTCTTGGGTATGTTCT +
Preference number: 3 (lower is better)
Translates to: GLFGCAKREVAVTGDPKMYPLGD*SSWVCS
Trigger: AGAACATACCCAAGAGGACAAATCCCCCAGGGGGTA...CATTTTTGGGTCTCCGGTCACTGCCACTTCACGCTTGGCACACCCAAACAAACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000566925.5
3UTR TCA 72 bp GACCAGCCCTGTGTGAAAGACAGGCAGATTCCAACATaGGATCAGATCAGGCCGAGGTTTCAGATGGCAGGA +
Preference number: 3 (lower is better)
Translates to: DQPCVKDRQIPT*DQIRPRFQMAG
Trigger: TCCTGCCATCTGAAACCTCGGCCTGATCTGATCTCATGTTGGAATCTGCCTGTCTTTCACACAGGGCTGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
3UTR GCA 72 bp CCAAATGTAAACGACAGCCACACAGCAGGGCTTGCATaGGCAGGAACTCTTCTTCTCCCAGTGAGCAGACTA +
Preference number: 3 (lower is better)
Translates to: PNVNDSHTAGLA*AGTLLLPVSRL
Trigger: TAGTCTGCTCACTGGGAGAAGAAGAGTTCCTGCGCATGCAAGCCCTGCTGTGTGGCTGTCGTTTACATTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
3UTR CCA 72 bp AGATCAGATCAGGCCGAGGTTTCAGATGGCAGGAACTaGGCACTTCAGAGGGTCAGGGCACCAAAACAATCT +
Preference number: 3 (lower is better)
Translates to: RSDQAEVSDGRN*ALQRVRAPKQS
Trigger: AGATTGTTTTGGTGCCCTGACCCTCTGAAGTGCCCAGTTCCTGCCATCTGAAACCTCGGCCTGATCTGATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
3UTR CCA 72 bp TCTCTTGAGTTTCTGGTCTGGCTCCGGGTGGAGCAGTaGCTTCTCTTAGTAGAAGGAGATGCTGGATTTGCC +
Preference number: 3 (lower is better)
Translates to: SLEFLVWLRVEQ*LLLVEGDAGFA
Trigger: GGCAAATCCAGCATCTCCTTCTACTAAGAGAAGCCACTGCTCCACCCGGAGCCAGACCAGAAACTCAAGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561516.5
ENST00000569765.5
3UTR-3UTR CAA 90 bp CCGAGGTTTCAGATGGCAGGAACTGGGCACTTCAGAGGGTCAGGGCACCAAAACAGTGGACAGGCTGTTTaGGTTTCTTTCAGTCATTCC +
Preference number: 3 (lower is better)
Translates to: PRFQMAGTGHFRGSGHQNSGQAV*VSFSHS
Trigger: GGAATGACTGAAAGAAACCAAAACAGCCTGTCCACT...GTTTTGGTGCCCTGACCCTCTGAAGTGCCCAGTTCCTGCCATCTGAAACCTCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
3UTR TCA 72 bp AACATGATCCTTGGGTTTGTTTGGGTGTGCCAAGCGTaGAGTGGCAGTGACCGGAGACCCAAAAATGTCGCT +
Preference number: 3 (lower is better)
Translates to: NMILGFVWVCQA*SGSDRRPKNVA
Trigger: AGCGACATTTTTGGGTCTCCGGTCACTGCCACTTCACGCTTGGCACACCCAAACAAACCCAAGGATCATGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566925.5
3UTR-3UTR CAA 90 bp TGCAAGGGCTGGGAGAATCACAGGGCCCAGTACCGTCACGTCCTATTTCTTCCTGTTGCATCAATGACTTaGAAGCACAAACCACCTGAA +
Preference number: 3 (lower is better)
Translates to: CKGWENHRAQYRHVLFLPVASMT*KHKPPE
Trigger: TTCAGGTGGTTTGTGCTTCAAAGTCATTGATGCAAC...AGGAAGAAATAGGACGTGACGGTACTGGGCCCTGTGATTCTCCCAGCCCTTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
3UTR GCA 72 bp TCCCAAAGACCCAAAGACTACAGACCTGAGCCACCATaGCCACCTGTTTTCTTGACAGGACTTGCATATGAC +
Preference number: 3 (lower is better)
Translates to: SQRPKDYRPEPP*PPVFLTGLAYD
Trigger: GTCATATGCAAGTCCTGTCAAGAAAACAGGTGGGCATGGTGGCTCAGGTCTGTAGTCTTTGGGTCTTTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000248098.8
3UTR CCA 72 bp CTCCTCCATCCCACAGCAGCAGTGGACAGGCTGTTTTaGTTTCTTTCAGTCATTCCTAGACATCCAATCAGC +
Preference number: 3 (lower is better)
Translates to: LLHPTAAVDRLF*FLSVIPRHPIS
Trigger: GCTGATTGGATGTCTAGGAATGACTGAAAGAAACCAAAACAGCCTGTCCACTGCTGCTGTGGGATGGAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248098.8
ENST00000561516.5
ENST00000562684.5
3UTR CCA 72 bp GAAAACATGGCTACCCTATCTCTTGAGTTTCTGGTCTaGCTCCGGGTGGAGCAGTGGCTTCTCTTAGTAGAA +
Preference number: 3 (lower is better)
Translates to: ENMATLSLEFLV*LRVEQWLLLVE
Trigger: TTCTACTAAGAGAAGCCACTGCTCCACCCGGAGCCAGACCAGAAACTCAAGAGATAGGGTAGCCATGTTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561516.5
ENST00000569765.5
3UTR-3UTR CAA 90 bp AAATCTTCCAAATACAGGCAGTCCCCAACGTACAGACATACAGGACACCTCCCAGGAAGCTGTCTTTGGTaGACAAAGCCTTGTGCAGAC +
Preference number: 3 (lower is better)
Translates to: KSSKYRQSPTYRHTGHLPGSCLW*TKPCAD
Trigger: GTCTGCACAAGGCTTTGTCAACCAAAGACAGCTTCC...TGGGAGGTGTCCTGTATGTCTGTACGTTGGGGACTGCCTGTATTTGGAAGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
3UTR CCA 72 bp ACAGGTGTGACTTTGCTACTGAACTCCTTCATCTCCTaGCCTAAGGTCTCTAGTCTCTTCTGGAAGCTTGTT +
Preference number: 3 (lower is better)
Translates to: TGVTLLLNSFIS*PKVSSLFWKLV
Trigger: AACAAGCTTCCAGAAGAGACTAGAGACCTTAGGCCAGGAGATGAAGGAGTTCAGTAGCAAAGTCACACCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
3UTR CCA 72 bp TACCACTTCCTTTACCCCCTGGGGGATTTGTCCTCTTaGGTATGTTCTGAGGTTCTTCTGTTGGTCCAAAAA +
Preference number: 3 (lower is better)
Translates to: YHFLYPLGDLSS*VCSEVLLLVQK
Trigger: TTTTTGGACCAACAGAAGAACCTCAGAACATACCCAAGAGGACAAATCCCCCAGGGGGTAAAGGAAGTGGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000566925.5
3UTR CCA 72 bp GTTAGATCCAGAAGTTCTATAAAGCTTTGTAGAGGGTaGCCTCCACAGCTCTTCTTCCTCTTTGGTGTACCT +
Preference number: 3 (lower is better)
Translates to: VRSRSSIKLCRG*PPQLFFLFGVP
Trigger: AGGTACACCAAAGAGGAAGAAGAGCTGTGGAGGCCACCCTCTACAAAGCTTTATAGAACTTCTGGATCTAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
3UTR CCA 72 bp TCACAGGGCCCAGTACCGTCACGTCCTATTTCTTCCTaGCAATCTGATTTGGAATTCGTGAATCATTTTCTC +
Preference number: 3 (lower is better)
Translates to: SQGPVPSRPISS*QSDLEFVNHFL
Trigger: GAGAAAATGATTCACGAATTCCAAATCAGATTGCCAGGAAGAAATAGGACGTGACGGTACTGGGCCCTGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
3UTR TCA 72 bp TCAAGTTGCATCAATGACTTTGAAGCACAAACCACCTaGAGTGTGTGTAGAGTCACACAGAGTGTTTCTTGG +
Preference number: 3 (lower is better)
Translates to: SSCINDFEAQTT*SVCRVTQSVSW
Trigger: CCAAGAAACACTCTGTGTGACTCTACACACACTTCAGGTGGTTTGTGCTTCAAAGTCATTGATGCAACTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
3UTR GCA 72 bp GGCTTAATACAAATACAGAGACGAGTCATTTCTCAATaGAGCTTAGAGGGTGAGAACAGGATGCTAGGTTTT +
Preference number: 3 (lower is better)
Translates to: GLIQIQRRVISQ*SLEGENRMLGF
Trigger: AAAACCTAGCATCCTGTTCTCACCCTCTAAGCTGCATTGAGAAATGACTCGTCTCTGTATTTGTATTAAGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
CDS-3UTR CCA 90 bp CGAGGCCGCGGCCCCAGCCGGGGCTCATGGCTGTCGACTGTGGGCATGGGCTCCTGGGCTCCTGCTCCTTaGCGGGGCCTGCTTTTCTGG +
Preference number: 4 (lower is better)
Translates to: RGRGPSRGSWLSTVGMGSWAPAP*RGLLFW
Trigger: CCAGAAAAGCAGGCCCCGCCAAGGAGCAGGAGCCCA...GGAGCCCATGCCCACAGTCGACAGCCATGAGCCCCGGCTGGGGCCGCGGCCTCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000561516.5
ENST00000569765.5
CDS-3UTR CCA 90 bp CGCGGCCCCAGCCGGGGCTCATGGCTGTCGACTGTGGGCATGGGCTCCTGCTCCCCCAGCCGGGGCTCATaGCTGTCGACTGTGGGCATG +
Preference number: 4 (lower is better)
Translates to: RGPSRGSWLSTVGMGSCSPSRGS*LSTVGM
Trigger: CATGCCCACAGTCGACAGCCATGAGCCCCGGCTGGG...GGAGCAGGAGCCCATGCCCACAGTCGACAGCCATGAGCCCCGGCTGGGGCCGCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000561516.5
ENST00000569765.5
CDS-3UTR GCA 90 bp GCGAGGCCGCGGCCCCAGCCGGGGCTCATGGCTGTCGACTGTGGGCATGGGCTCCTCCTTGGCGGGGCCTaGTTTTCTGGCGCTGCCTTT +
Preference number: 4 (lower is better)
Translates to: ARPRPQPGLMAVDCGHGLLLGGA*FSGAAF
Trigger: AAAGGCAGCGCCAGAAAAGCAGGCCCCGCCAAGGAG...GAGCCCATGCCCACAGTCGACAGCCATGAGCCCCGGCTGGGGCCGCGGCCTCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000561516.5
ENST00000569765.5
CDS-3UTR GCA 90 bp GGCCGCGGCCCCAGCCGGGGCTCATGGCTGTCGACTGTGGGCATGGGCTCCTGCTTGATCCAAGGACCATaGCCTGCCCCACCTCCCCAC +
Preference number: 4 (lower is better)
Translates to: GRGPSRGSWLSTVGMGSCLIQGP*PAPPPH
Trigger: GTGGGGAGGTGGGGCAGGGCATGGTCCTTGGATCAA...GCAGGAGCCCATGCCCACAGTCGACAGCCATGAGCCCCGGCTGGGGCCGCGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000561516.5
CDS-3UTR CCA 90 bp GCGAGGCCGCGGCCCCAGCCGGGGCTCATGGCTGTCGACTGTGGGCATGGGCTCGCTCGATTCTCCTCCTaGGGGCTTCATGGCCCTGGA +
Preference number: 4 (lower is better)
Translates to: ARPRPQPGLMAVDCGHGLARFSS*GLHGPG
Trigger: TCCAGGGCCATGAAGCCCCCAGGAGGAGAATCGAGC...GAGCCCATGCCCACAGTCGACAGCCATGAGCCCCGGCTGGGGCCGCGGCCTCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000561516.5
CDS-3UTR CCA 90 bp GCGAGGCCGCGGCCCCAGCCGGGGCTCATGGCTGTCGACTGTGGGCATGGGCTCGCTGCCTTTCTCACCTaGCTCTGCTCCAGCCGGGAT +
Preference number: 4 (lower is better)
Translates to: ARPRPQPGLMAVDCGHGLAAFLT*LCSSRD
Trigger: ATCCCGGCTGGAGCAGAGCCAGGTGAGAAAGGCAGC...GAGCCCATGCCCACAGTCGACAGCCATGAGCCCCGGCTGGGGCCGCGGCCTCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561516.5
ENST00000569765.5
CDS-3UTR TCA 90 bp AGGCACGGGTCTCCAAGCAGCTGTCATGACGGCCAGGAGACGCTGAGCAGCCAGGGCTTCATGGCCCTCTaGAGTGGTGCCCAGGGCCCC +
Preference number: 4 (lower is better)
Translates to: RHGSPSSCHDGQETLSSQGFMAL*SGAQGP
Trigger: GGGGCCCTGGGCACCACTTCAGAGGGCCATGAAGCC...CTGGCTGCTCAGCGTCTCCTGGCCGTCATGACAGCTGCTTGGAGACCCGTGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382711.9
ENST00000562684.5
ENST00000569765.5
CDS-3UTR CCA 90 bp GGCCGCGGCCCCAGCCGGGGCTCATGGCTGTCGACTGTGGGCATGGGCTCCTGCCTCCGGGTGGAGCAGTaGCTTCTCTTAGTAGAAGGA +
Preference number: 4 (lower is better)
Translates to: GRGPSRGSWLSTVGMGSCLRVEQ*LLLVEG
Trigger: TCCTTCTACTAAGAGAAGCCACTGCTCCACCCGGAG...GCAGGAGCCCATGCCCACAGTCGACAGCCATGAGCCCCGGCTGGGGCCGCGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561516.5
ENST00000569765.5
CDS-3UTR TCA 90 bp AGGCACGGGTCTCCAAGCAGCTGTCATGACGGCCAGGAGACGCTGAGCAGCCAGTTCAGGACCTTGTTGTaGGAGCGAGGCCGCGGCCCC +
Preference number: 4 (lower is better)
Translates to: RHGSPSSCHDGQETLSSQFRTLL*ERGRGP
Trigger: GGGGCCGCGGCCTCGCTCTCACAACAAGGTCCTGAA...CTGGCTGCTCAGCGTCTCCTGGCCGTCATGACAGCTGCTTGGAGACCCGTGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
CDS-3UTR TCA 90 bp CACGGGTCTCCAAGCAGCTGTCATGACGGCCAGGAGACGCTGAGCAGCCAGGCTTTCAGGACCTTGTTGTaGGAGCGAGGCCGCGGCCCC +
Preference number: 4 (lower is better)
Translates to: HGSPSSCHDGQETLSSQAFRTLL*ERGRGP
Trigger: GGGGCCGCGGCCTCGCTCTCACAACAAGGTCCTGAA...AGCCTGGCTGCTCAGCGTCTCCTGGCCGTCATGACAGCTGCTTGGAGACCCGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
CDS-3UTR TCA 90 bp CATCCCCACAGAGGCATCTCCCAGCCATCTGGAAGGCACGGGTCTCCAAGCAGCGGCTTCATGGCCCTCTaGAGTGGTGCCCAGGGCCCC +
Preference number: 4 (lower is better)
Translates to: HPHRGISQPSGRHGSPSSGFMAL*SGAQGP
Trigger: GGGGCCCTGGGCACCACTTCAGAGGGCCATGAAGCC...GCTGCTTGGAGACCCGTGCCTTCCAGATGGCTGGGAGATGCCTCTGTGGGGATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382711.9
ENST00000562684.5
ENST00000569765.5
CDS-3UTR GCA 90 bp TGCTGGATTTGCCTCCCGGTGGGTTCAGGACCTTGTTGTGAGAGCGAGGCCGCGGTGGGCATGGGCTCCTaGTCCTTGGCGGGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: CWICLPVGSGPCCESEAAVGMGS*SLAGPA
Trigger: AGCAGGCCCCGCCAAGGAGCAGGAGCCCATGCCCAC...CGCGGCCTCGCTCTCACAACAAGGTCCTGAACCCACCGGGAGGCAAATCCAGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561516.5
ENST00000569765.5
CDS-3UTR CCA 90 bp CACGGGTCTCCAAGCAGCTGTCATGACGGCCAGGAGACGCTGAGCAGCCAGGCTCATGGCCCTCTGAAGTaGTGCCCAGGGCCCCTGTCC +
Preference number: 4 (lower is better)
Translates to: HGSPSSCHDGQETLSSQAHGPLK*CPGPLS
Trigger: GGACAGGGGCCCTGGGCACCACTTCAGAGGGCCATG...AGCCTGGCTGCTCAGCGTCTCCTGGCCGTCATGACAGCTGCTTGGAGACCCGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382711.9
ENST00000562684.5
ENST00000569765.5
CDS-3UTR TCA 90 bp CCCCATTTCATCCCCACAGAGGCATCTCCCAGCCATCTGGAAGGCACGGGTCTCGGCTTCATGGCCCTCTaGAGTGGTGCCCAGGGCCCC +
Preference number: 4 (lower is better)
Translates to: PHFIPTEASPSHLEGTGLGFMAL*SGAQGP
Trigger: GGGGCCCTGGGCACCACTTCAGAGGGCCATGAAGCC...GAGACCCGTGCCTTCCAGATGGCTGGGAGATGCCTCTGTGGGGATGAAATGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382711.9
ENST00000562684.5
ENST00000569765.5
CDS-3UTR GCA 90 bp GTGCCCCATTTCATCCCCACAGAGGCATCTCCCAGCCATCTGGAAGGCACGGGTGTGGGCATGGGCTCCTaGTCCTTGGCGGGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: VPHFIPTEASPSHLEGTGVGMGS*SLAGPA
Trigger: AGCAGGCCCCGCCAAGGAGCAGGAGCCCATGCCCAC...ACCCGTGCCTTCCAGATGGCTGGGAGATGCCTCTGTGGGGATGAAATGGGGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
CDS-3UTR GCA 90 bp CATCCCCACAGAGGCATCTCCCAGCCATCTGGAAGGCACGGGTCTCCAAGCAGCCCAAGGACCATGCCCTaGCCCACCTCCCCACCCTCA +
Preference number: 4 (lower is better)
Translates to: HPHRGISQPSGRHGSPSSPRTMP*PTSPPS
Trigger: TGAGGGTGGGGAGGTGGGGCAGGGCATGGTCCTTGG...GCTGCTTGGAGACCCGTGCCTTCCAGATGGCTGGGAGATGCCTCTGTGGGGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248098.8
ENST00000561516.5
ENST00000562684.5
CDS-3UTR CCA 90 bp GCTACCCTATCTCTTGAGTTTCTGGTCTGGCTCCGGGTGGAGCAGTGGCTTCTCCTCCTGGGGGCTTCATaGCCCTGGAGCCGGCGCGGC +
Preference number: 4 (lower is better)
Translates to: ATLSLEFLVWLRVEQWLLLLGAS*PWSRRG
Trigger: GCCGCGCCGGCTCCAGGGCCATGAAGCCCCCAGGAG...GAGAAGCCACTGCTCCACCCGGAGCCAGACCAGAAACTCAAGAGATAGGGTAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000561516.5
CDS-3UTR CCA 90 bp AGGCACGGGTCTCCAAGCAGCTGTCATGACGGCCAGGAGACGCTGAGCAGCCAGTGTCGACTGTGGGCATaGGCTCCTGCTCCTTGGCGG +
Preference number: 4 (lower is better)
Translates to: RHGSPSSCHDGQETLSSQCRLWA*APAPWR
Trigger: CCGCCAAGGAGCAGGAGCCCATGCCCACAGTCGACA...CTGGCTGCTCAGCGTCTCCTGGCCGTCATGACAGCTGCTTGGAGACCCGTGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
CDS-3UTR CCA 90 bp CCGGGGCTCATGGCTGTCGACTGTGGGCATGGGCTCCTGCTCCTTGGCGGGGCCTATCTCTTGAGTTTCTaGTCTGGCTCCGGGTGGAGC +
Preference number: 4 (lower is better)
Translates to: PGLMAVDCGHGLLLLGGAYLLSF*SGSGWS
Trigger: GCTCCACCCGGAGCCAGACCAGAAACTCAAGAGATA...GGCCCCGCCAAGGAGCAGGAGCCCATGCCCACAGTCGACAGCCATGAGCCCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561516.5
ENST00000569765.5
CDS-3UTR CCA 90 bp CATCCCCACAGAGGCATCTCCCAGCCATCTGGAAGGCACGGGTCTCCAAGCAGCCATGGCCCTCTGAAGTaGTGCCCAGGGCCCCTGTCC +
Preference number: 4 (lower is better)
Translates to: HPHRGISQPSGRHGSPSSHGPLK*CPGPLS
Trigger: GGACAGGGGCCCTGGGCACCACTTCAGAGGGCCATG...GCTGCTTGGAGACCCGTGCCTTCCAGATGGCTGGGAGATGCCTCTGTGGGGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382711.9
ENST00000562684.5
ENST00000569765.5
CDS-3UTR CCA 90 bp CACGGGTCTCCAAGCAGCTGTCATGACGGCCAGGAGACGCTGAGCAGCCAGGCTCTCCTGGGGGCTTCATaGCCCTCTGAAGTGGTGCCC +
Preference number: 4 (lower is better)
Translates to: HGSPSSCHDGQETLSSQALLGAS*PSEVVP
Trigger: GGGCACCACTTCAGAGGGCCATGAAGCCCCCAGGAG...AGCCTGGCTGCTCAGCGTCTCCTGGCCGTCATGACAGCTGCTTGGAGACCCGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382711.9
ENST00000562684.5
ENST00000569765.5
CDS-3UTR TCA 90 bp CACGGGTCTCCAAGCAGCTGTCATGACGGCCAGGAGACGCTGAGCAGCCAGGCTTGGGTGTGCCAAGCGTaGAGTGGCAGTGACCGGAGA +
Preference number: 4 (lower is better)
Translates to: HGSPSSCHDGQETLSSQAWVCQA*SGSDRR
Trigger: TCTCCGGTCACTGCCACTTCACGCTTGGCACACCCA...AGCCTGGCTGCTCAGCGTCTCCTGGCCGTCATGACAGCTGCTTGGAGACCCGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000562684.5
CDS-3UTR TCA 90 bp GTGCCCCATTTCATCCCCACAGAGGCATCTCCCAGCCATCTGGAAGGCACGGGTTTCAGGACCTTGTTGTaGGAGCGAGGCCGCGGCCCC +
Preference number: 4 (lower is better)
Translates to: VPHFIPTEASPSHLEGTGFRTLL*ERGRGP
Trigger: GGGGCCGCGGCCTCGCTCTCACAACAAGGTCCTGAA...ACCCGTGCCTTCCAGATGGCTGGGAGATGCCTCTGTGGGGATGAAATGGGGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
CDS-3UTR TCA 90 bp AGGCACGGGTCTCCAAGCAGCTGTCATGACGGCCAGGAGACGCTGAGCAGCCAGTCCAAGCAGCTGTCATaGCGGCCAGGAGACGCTGAG +
Preference number: 4 (lower is better)
Translates to: RHGSPSSCHDGQETLSSQSKQLS*RPGDAE
Trigger: CTCAGCGTCTCCTGGCCGTCATGACAGCTGCTTGGA...CTGGCTGCTCAGCGTCTCCTGGCCGTCATGACAGCTGCTTGGAGACCCGTGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
CDS-3UTR TCA 90 bp CCCATTTCATCCCCACAGAGGCATCTCCCAGCCATCTGGAAGGCACGGGTCTCCCACCCAAGGGCAGCATaGGAACTGGGCCTGCAGCCC +
Preference number: 4 (lower is better)
Translates to: PISSPQRHLPAIWKARVSHPRAA*ELGLQP
Trigger: GGGCTGCAGGCCCAGTTCTCATGCTGCCCTTGGGTG...GGAGACCCGTGCCTTCCAGATGGCTGGGAGATGCCTCTGTGGGGATGAAATGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
CDS-3UTR TCA 90 bp CGTGAAGTGGCAGTGACCGGAGACCCAAAAATGTCGCTGGTCTTCCCTCCAGGTGTGCTGGCCGACCTCTaGAGTGGTGCCCAGGGCCCC +
Preference number: 4 (lower is better)
Translates to: REVAVTGDPKMSLVFPPGVLADL*SGAQGP
Trigger: GGGGCCCTGGGCACCACTTCAGAGGTCGGCCAGCAC...ACCTGGAGGGAAGACCAGCGACATTTTTGGGTCTCCGGTCACTGCCACTTCACG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566925.5
CDS-3UTR GCA 90 bp CATGGCTGTCGACTGTGGGCATGGGCTCCTGCTCCTTGGCGGGGCCTGCTTTTCCTCCTTGGCGGGGCCTaGTTTTCTGGCGCTGCCTTT +
Preference number: 4 (lower is better)
Translates to: HGCRLWAWAPAPWRGLLFLLGGA*FSGAAF
Trigger: AAAGGCAGCGCCAGAAAAGCAGGCCCCGCCAAGGAG...GAAAAGCAGGCCCCGCCAAGGAGCAGGAGCCCATGCCCACAGTCGACAGCCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000561516.5
ENST00000569765.5
CDS-3UTR CCA 90 bp TGCAAGGGCTGGGAGAATCACAGGGCCCAGTACCGTCACGTCCTATTTCTTCCTCTCCTGGGGGCTTCATaGCCCTGGAGCCGGCGCGGC +
Preference number: 4 (lower is better)
Translates to: CKGWENHRAQYRHVLFLPLLGAS*PWSRRG
Trigger: GCCGCGCCGGCTCCAGGGCCATGAAGCCCCCAGGAG...AGGAAGAAATAGGACGTGACGGTACTGGGCCCTGTGATTCTCCCAGCCCTTGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000248098.8
CDS-3UTR CCA 90 bp GGCCGCGGCCCCAGCCGGGGCTCATGGCTGTCGACTGTGGGCATGGGCTCCTGCGGGGATTTGTCCTCTTaGGTATGTTCTGAGGTTCTT +
Preference number: 4 (lower is better)
Translates to: GRGPSRGSWLSTVGMGSCGDLSS*VCSEVL
Trigger: AAGAACCTCAGAACATACCCAAGAGGACAAATCCCC...GCAGGAGCCCATGCCCACAGTCGACAGCCATGAGCCCCGGCTGGGGCCGCGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000561516.5
ENST00000569765.5
CDS-3UTR CCA 90 bp CACGGGTCTCCAAGCAGCTGTCATGACGGCCAGGAGACGCTGAGCAGCCAGGCTCATGGCTGTCGACTGTaGGCATGGGCTCCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: HGSPSSCHDGQETLSSQAHGCRL*AWAPAP
Trigger: AGGAGCAGGAGCCCATGCCCACAGTCGACAGCCATG...AGCCTGGCTGCTCAGCGTCTCCTGGCCGTCATGACAGCTGCTTGGAGACCCGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
CDS-3UTR CCA 90 bp CCCCATTTCATCCCCACAGAGGCATCTCCCAGCCATCTGGAAGGCACGGGTCTCCCCAGCCGGGGCTCATaGCTGTCGACTGTGGGCATG +
Preference number: 4 (lower is better)
Translates to: PHFIPTEASPSHLEGTGLPSRGS*LSTVGM
Trigger: CATGCCCACAGTCGACAGCCATGAGCCCCGGCTGGG...GAGACCCGTGCCTTCCAGATGGCTGGGAGATGCCTCTGTGGGGATGAAATGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
CDS-3UTR CCA 90 bp GTGCCCCATTTCATCCCCACAGAGGCATCTCCCAGCCATCTGGAAGGCACGGGTCCCAGCCGGGGCTCATaGCTGTCGACTGTGGGCATG +
Preference number: 4 (lower is better)
Translates to: VPHFIPTEASPSHLEGTGPSRGS*LSTVGM
Trigger: CATGCCCACAGTCGACAGCCATGAGCCCCGGCTGGG...ACCCGTGCCTTCCAGATGGCTGGGAGATGCCTCTGTGGGGATGAAATGGGGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
CDS-3UTR CCA 90 bp GACCGGAGACCCAAAAATGTCGCTGGTCTTCCCTCCAGGTGGGTTCAGGTGCTGGCAGTTGCCATTTCCTaGAGCCGGCGCGGCCGCCCT +
Preference number: 4 (lower is better)
Translates to: DRRPKNVAGLPSRWVQVLAVAIS*SRRGRP
Trigger: AGGGCGGCCGCGCCGGCTCCAGGAAATGGCAACTGC...CAGCACCTGAACCCACCTGGAGGGAAGACCAGCGACATTTTTGGGTCTCCGGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566925.5
CDS-3UTR TCA 90 bp CCCCATTTCATCCCCACAGAGGCATCTCCCAGCCATCTGGAAGGCACGGGTCTCCAGCTGGCGGGCTGTTaGTCCAAGGACCATGCCCTG +
Preference number: 4 (lower is better)
Translates to: PHFIPTEASPSHLEGTGLQLAGC*SKDHAL
Trigger: CAGGGCATGGTCCTTGGATCAACAGCCCGCCAGCTG...GAGACCCGTGCCTTCCAGATGGCTGGGAGATGCCTCTGTGGGGATGAAATGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248098.8
ENST00000561516.5
ENST00000562684.5
CDS-3UTR GCA 90 bp ACCCAGAAGTCCCTGCCAGGGGCGGAAGTAAAGAGCTTTTCCTCTCACCTAGCGGTGGGCATGGGCTCCTaGTCCTTGGCGGGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: TQKSLPGAEVKSFSSHLAVGMGS*SLAGPA
Trigger: AGCAGGCCCCGCCAAGGAGCAGGAGCCCATGCCCAC...CGCTAGGTGAGAGGAAAAGCTCTTTACTTCCGCCCCTGGCAGGGACTTCTGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
CDS-3UTR GCA 90 bp GCTACCCTATCTCTTGAGTTTCTGGTCTGGCTCCGGGTGGAGCAGTGGCTTCTCGTGGGCATGGGCTCCTaGTCCTTGGCGGGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: ATLSLEFLVWLRVEQWLLVGMGS*SLAGPA
Trigger: AGCAGGCCCCGCCAAGGAGCAGGAGCCCATGCCCAC...GAGAAGCCACTGCTCCACCCGGAGCCAGACCAGAAACTCAAGAGATAGGGTAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
CDS-3UTR CCA 90 bp CCCCATTTCATCCCCACAGAGGCATCTCCCAGCCATCTGGAAGGCACGGGTCTCTCGCTATCCGGGACCTaGAACATGTCGACCGCCGCC +
Preference number: 4 (lower is better)
Translates to: PHFIPTEASPSHLEGTGLSLSGT*NMSTAA
Trigger: GGCGGCGGTCGACATGTTCCAGGTCCCGGATAGCGA...GAGACCCGTGCCTTCCAGATGGCTGGGAGATGCCTCTGTGGGGATGAAATGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248098.8
ENST00000561516.5
ENST00000562684.5
CDS-3UTR CCA 90 bp GGGTGCCCCATTTCATCCCCACAGAGGCATCTCCCAGCCATCTGGAAGGCACGGGCTGCCTTTCTCACCTaGCTCTGCTCCAGCCGGGAT +
Preference number: 4 (lower is better)
Translates to: GCPISSPQRHLPAIWKARAAFLT*LCSSRD
Trigger: ATCCCGGCTGGAGCAGAGCCAGGTGAGAAAGGCAGC...CCGTGCCTTCCAGATGGCTGGGAGATGCCTCTGTGGGGATGAAATGGGGCACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
CDS-3UTR CCA 90 bp GGTGCCCCATTTCATCCCCACAGAGGCATCTCCCAGCCATCTGGAAGGCACGGGCGGGGCCTGCTTTTCTaGCGCTGCCTTTCTCACCTG +
Preference number: 4 (lower is better)
Translates to: GAPFHPHRGISQPSGRHGRGLLF*RCLSHL
Trigger: CAGGTGAGAAAGGCAGCGCCAGAAAAGCAGGCCCCG...CCCGTGCCTTCCAGATGGCTGGGAGATGCCTCTGTGGGGATGAAATGGGGCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
CDS-3UTR CCA 90 bp CCCATTTCATCCCCACAGAGGCATCTCCCAGCCATCTGGAAGGCACGGGTCTCCTGGGCTCCTGCTCCTTaGCGGGGCCTGCTTTTCTGG +
Preference number: 4 (lower is better)
Translates to: PISSPQRHLPAIWKARVSWAPAP*RGLLFW
Trigger: CCAGAAAAGCAGGCCCCGCCAAGGAGCAGGAGCCCA...GGAGACCCGTGCCTTCCAGATGGCTGGGAGATGCCTCTGTGGGGATGAAATGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
CDS-3UTR CCA 90 bp CATCCCCACAGAGGCATCTCCCAGCCATCTGGAAGGCACGGGTCTCCAAGCAGCCATGGCTGTCGACTGTaGGCATGGGCTCCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: HPHRGISQPSGRHGSPSSHGCRL*AWAPAP
Trigger: AGGAGCAGGAGCCCATGCCCACAGTCGACAGCCATG...GCTGCTTGGAGACCCGTGCCTTCCAGATGGCTGGGAGATGCCTCTGTGGGGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
CDS-3UTR CCA 90 bp GGTGCCCCATTTCATCCCCACAGAGGCATCTCCCAGCCATCTGGAAGGCACGGGCATGGCTGTCGACTGTaGGCATGGGCTCCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: GAPFHPHRGISQPSGRHGHGCRL*AWAPAP
Trigger: AGGAGCAGGAGCCCATGCCCACAGTCGACAGCCATG...CCCGTGCCTTCCAGATGGCTGGGAGATGCCTCTGTGGGGATGAAATGGGGCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
CDS-3UTR CCA 90 bp CCATTTCATCCCCACAGAGGCATCTCCCAGCCATCTGGAAGGCACGGGTCTCCACCCAGCCGGGGCTCATaGCTGTCGACTGTGGGCATG +
Preference number: 4 (lower is better)
Translates to: PFHPHRGISQPSGRHGSPPSRGS*LSTVGM
Trigger: CATGCCCACAGTCGACAGCCATGAGCCCCGGCTGGG...TGGAGACCCGTGCCTTCCAGATGGCTGGGAGATGCCTCTGTGGGGATGAAATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
CDS-3UTR CCA 90 bp TTCATCCCCACAGAGGCATCTCCCAGCCATCTGGAAGGCACGGGTCTCCAAGCACCCAGCCGGGGCTCATaGCTGTCGACTGTGGGCATG +
Preference number: 4 (lower is better)
Translates to: FIPTEASPSHLEGTGLQAPSRGS*LSTVGM
Trigger: CATGCCCACAGTCGACAGCCATGAGCCCCGGCTGGG...TGCTTGGAGACCCGTGCCTTCCAGATGGCTGGGAGATGCCTCTGTGGGGATGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
CDS-3UTR CCA 90 bp CATCCCCACAGAGGCATCTCCCAGCCATCTGGAAGGCACGGGTCTCCAAGCAGCGCTCGATTCTCCTCCTaGGGGCTTCATGGCCCTCTG +
Preference number: 4 (lower is better)
Translates to: HPHRGISQPSGRHGSPSSARFSS*GLHGPL
Trigger: CAGAGGGCCATGAAGCCCCCAGGAGGAGAATCGAGC...GCTGCTTGGAGACCCGTGCCTTCCAGATGGCTGGGAGATGCCTCTGTGGGGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382711.9
ENST00000562684.5
ENST00000569765.5
3UTR CAA 72 bp TCATGGCTGTCGACTGTGGGCATGGGCTCCTGCTCCTaGGCGGGGCCTGCTTTTCTGGCGCTGCCTTTCTCA +
Preference number: 4 (lower is better)
Translates to: SWLSTVGMGSCS*AGPAFLALPFS
Trigger: TGAGAAAGGCAGCGCCAGAAAAGCAGGCCCCGCCAAGGAGCAGGAGCCCATGCCCACAGTCGACAGCCATGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561516.5
ENST00000569765.5
CDS-3UTR TCA 90 bp CCCCATTTCATCCCCACAGAGGCATCTCCCAGCCATCTGGAAGGCACGGGTCTCTGGGTGTGCCAAGCGTaGAGTGGCAGTGACCGGAGA +
Preference number: 4 (lower is better)
Translates to: PHFIPTEASPSHLEGTGLWVCQA*SGSDRR
Trigger: TCTCCGGTCACTGCCACTTCACGCTTGGCACACCCA...GAGACCCGTGCCTTCCAGATGGCTGGGAGATGCCTCTGTGGGGATGAAATGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000562684.5
CDS-3UTR TCA 90 bp AGGCACGGGTCTCCAAGCAGCTGTCATGACGGCCAGGAGACGCTGAGCAGCCAGGGCTACCCTATCTCTTaGGTTTCTGGTCTGGCTCCG +
Preference number: 4 (lower is better)
Translates to: RHGSPSSCHDGQETLSSQGYPIS*VSGLAP
Trigger: CGGAGCCAGACCAGAAACTCAAGAGATAGGGTAGCC...CTGGCTGCTCAGCGTCTCCTGGCCGTCATGACAGCTGCTTGGAGACCCGTGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
CDS-3UTR TCA 90 bp GTGCCCCATTTCATCCCCACAGAGGCATCTCCCAGCCATCTGGAAGGCACGGGTTCCAAGCAGCTGTCATaGCGGCCAGGAGACGCTGAG +
Preference number: 4 (lower is better)
Translates to: VPHFIPTEASPSHLEGTGSKQLS*RPGDAE
Trigger: CTCAGCGTCTCCTGGCCGTCATGACAGCTGCTTGGA...ACCCGTGCCTTCCAGATGGCTGGGAGATGCCTCTGTGGGGATGAAATGGGGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
CDS-3UTR TCA 90 bp GGTGCCCCATTTCATCCCCACAGAGGCATCTCCCAGCCATCTGGAAGGCACGGGTGGACTACACATGAGTaGTGGCCAGGGGTGCCCCAT +
Preference number: 4 (lower is better)
Translates to: GAPFHPHRGISQPSGRHGWTTHE*WPGVPH
Trigger: ATGGGGCACCCCTGGCCATCACTCATGTGTAGTCCA...CCCGTGCCTTCCAGATGGCTGGGAGATGCCTCTGTGGGGATGAAATGGGGCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
CDS-3UTR TCA 90 bp CATCCCCACAGAGGCATCTCCCAGCCATCTGGAAGGCACGGGTCTCCAAGCAGCAACCTGGACTACACATaGGTGATGGCCAGGGGTGCC +
Preference number: 4 (lower is better)
Translates to: HPHRGISQPSGRHGSPSSNLDYT*VMARGA
Trigger: GGCACCCCTGGCCATCACTCATGTGTAGTCCAGGTT...GCTGCTTGGAGACCCGTGCCTTCCAGATGGCTGGGAGATGCCTCTGTGGGGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
CDS-3UTR GCA 90 bp CCATTTCATCCCCACAGAGGCATCTCCCAGCCATCTGGAAGGCACGGGTCTCCACCAGGTGGGTTCAGGTaGTGTCGAGTCTGCACGGGG +
Preference number: 4 (lower is better)
Translates to: PFHPHRGISQPSGRHGSPPGGFR*CRVCTG
Trigger: CCCCGTGCAGACTCGACAGCACCTGAACCCACCTGG...TGGAGACCCGTGCCTTCCAGATGGCTGGGAGATGCCTCTGTGGGGATGAAATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000562684.5
CDS-3UTR GCA 90 bp GTGCCCCATTTCATCCCCACAGAGGCATCTCCCAGCCATCTGGAAGGCACGGGTCTCCTTGGCGGGGCCTaGTTTTCTGGCGCTGCCTTT +
Preference number: 4 (lower is better)
Translates to: VPHFIPTEASPSHLEGTGLLGGA*FSGAAF
Trigger: AAAGGCAGCGCCAGAAAAGCAGGCCCCGCCAAGGAG...ACCCGTGCCTTCCAGATGGCTGGGAGATGCCTCTGTGGGGATGAAATGGGGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
CDS-3UTR GCA 90 bp GTTTCTGCTTACGCCTCCTCCATCCCACAGCAGCAGTGGACAGGCTGTTTTGGTGTGGGCATGGGCTCCTaGTCCTTGGCGGGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: VSAYASSIPQQQWTGCFGVGMGS*SLAGPA
Trigger: AGCAGGCCCCGCCAAGGAGCAGGAGCCCATGCCCAC...ACCAAAACAGCCTGTCCACTGCTGCTGTGGGATGGAGGAGGCGTAAGCAGAAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248098.8
ENST00000561516.5
ENST00000562684.5
CDS-3UTR GCA 90 bp AGGCACGGGTCTCCAAGCAGCTGTCATGACGGCCAGGAGACGCTGAGCAGCCAGAGGAGATGCTGGATTTaGCTCCCGGTGGGTTCAGGA +
Preference number: 4 (lower is better)
Translates to: RHGSPSSCHDGQETLSSQRRCWI*LPVGSG
Trigger: TCCTGAACCCACCGGGAGGCAAATCCAGCATCTCCT...CTGGCTGCTCAGCGTCTCCTGGCCGTCATGACAGCTGCTTGGAGACCCGTGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
CDS-3UTR GCA 90 bp GGGTGCCCCATTTCATCCCCACAGAGGCATCTCCCAGCCATCTGGAAGGCACGGAGTGATGGCCAGGGGTaGCCCATTTCATCCCCACAG +
Preference number: 4 (lower is better)
Translates to: GCPISSPQRHLPAIWKARSDGQG*PISSPQ
Trigger: CTGTGGGGATGAAATGGGGCACCCCTGGCCATCACT...CCGTGCCTTCCAGATGGCTGGGAGATGCCTCTGTGGGGATGAAATGGGGCACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
CDS-3UTR GCA 90 bp GCTACCCTATCTCTTGAGTTTCTGGTCTGGCTCCGGGTGGAGCAGTGGCTTCTCCCAAGGACCATGCCCTaGCCCACCTCCCCACCCTCA +
Preference number: 4 (lower is better)
Translates to: ATLSLEFLVWLRVEQWLLPRTMP*PTSPPS
Trigger: TGAGGGTGGGGAGGTGGGGCAGGGCATGGTCCTTGG...GAGAAGCCACTGCTCCACCCGGAGCCAGACCAGAAACTCAAGAGATAGGGTAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248098.8
ENST00000561516.5
ENST00000562684.5
CDS-3UTR CCA 90 bp CGAGGCCGCGGCCCCAGCCGGGGCTCATGGCTGTCGACTGTGGGCATGGGCTCCAGGAGTAGCTTCTTCTaGACTTCCAAAAAGATTGCT +
Preference number: 4 (lower is better)
Translates to: RGRGPSRGSWLSTVGMGSRSSFF*TSKKIA
Trigger: AGCAATCTTTTTGGAAGTCCAGAAGAAGCTACTCCT...GGAGCCCATGCCCACAGTCGACAGCCATGAGCCCCGGCTGGGGCCGCGGCCTCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000561516.5
ENST00000569765.5
CDS-3UTR CCA 90 bp CCCATTTCATCCCCACAGAGGCATCTCCCAGCCATCTGGAAGGCACGGGTCTCCGCTGCCTTTCTCACCTaGCTCTGCTCCAGCCGGGAT +
Preference number: 4 (lower is better)
Translates to: PISSPQRHLPAIWKARVSAAFLT*LCSSRD
Trigger: ATCCCGGCTGGAGCAGAGCCAGGTGAGAAAGGCAGC...GGAGACCCGTGCCTTCCAGATGGCTGGGAGATGCCTCTGTGGGGATGAAATGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
CDS-3UTR CCA 90 bp CCCATTTCATCCCCACAGAGGCATCTCCCAGCCATCTGGAAGGCACGGGTCTCCCGGGGCCTGCTTTTCTaGCGCTGCCTTTCTCACCTG +
Preference number: 4 (lower is better)
Translates to: PISSPQRHLPAIWKARVSRGLLF*RCLSHL
Trigger: CAGGTGAGAAAGGCAGCGCCAGAAAAGCAGGCCCCG...GGAGACCCGTGCCTTCCAGATGGCTGGGAGATGCCTCTGTGGGGATGAAATGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
CDS-3UTR CCA 90 bp AGGCACGGGTCTCCAAGCAGCTGTCATGACGGCCAGGAGACGCTGAGCAGCCAGGGATTTGCCTCCCGGTaGGTTCAGGACCTTGTTGTG +
Preference number: 4 (lower is better)
Translates to: RHGSPSSCHDGQETLSSQGFASR*VQDLVV
Trigger: CACAACAAGGTCCTGAACCCACCGGGAGGCAAATCC...CTGGCTGCTCAGCGTCTCCTGGCCGTCATGACAGCTGCTTGGAGACCCGTGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
CDS-3UTR CCA 90 bp CATGGCTGTCGACTGTGGGCATGGGCTCCTGCTCCTTGGCGGGGCCTGCTTTTCGGATTTGCCTCCCGGTaGGTTCAGGACCTTGTTGTG +
Preference number: 4 (lower is better)
Translates to: HGCRLWAWAPAPWRGLLFGFASR*VQDLVV
Trigger: CACAACAAGGTCCTGAACCCACCGGGAGGCAAATCC...GAAAAGCAGGCCCCGCCAAGGAGCAGGAGCCCATGCCCACAGTCGACAGCCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561516.5
ENST00000569765.5
CDS-3UTR CCA 90 bp GGTGCCCCATTTCATCCCCACAGAGGCATCTCCCAGCCATCTGGAAGGCACGGGCATCTCCCAGCCATCTaGAAGGCACGGGTCTCCAAG +
Preference number: 4 (lower is better)
Translates to: GAPFHPHRGISQPSGRHGHLPAI*KARVSK
Trigger: CTTGGAGACCCGTGCCTTCCAGATGGCTGGGAGATG...CCCGTGCCTTCCAGATGGCTGGGAGATGCCTCTGTGGGGATGAAATGGGGCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
CDS-3UTR CCA 90 bp AGGCACGGGTCTCCAAGCAGCTGTCATGACGGCCAGGAGACGCTGAGCAGCCAGCTCCTGGGGGCTTCATaGCCCTCATCATCCAGTTCA +
Preference number: 4 (lower is better)
Translates to: RHGSPSSCHDGQETLSSQLLGAS*PSSSSS
Trigger: TGAACTGGATGATGAGGGCCATGAAGCCCCCAGGAG...CTGGCTGCTCAGCGTCTCCTGGCCGTCATGACAGCTGCTTGGAGACCCGTGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382710.8
CDS-3UTR CCA 90 bp AGCAGGGCTTGCATGCGCAGGAACTCTTCTTCTCCCAGTGAGCAGACTAAGCACGCAGTTGCCATTTCCTaGAGCCGGCGCGGCCGCCCT +
Preference number: 4 (lower is better)
Translates to: SRACMRRNSSSPSEQTKHAVAIS*SRRGRP
Trigger: AGGGCGGCCGCGCCGGCTCCAGGAAATGGCAACTGC...GTGCTTAGTCTGCTCACTGGGAGAAGAAGAGTTCCTGCGCATGCAAGCCCTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562684.5
CDS-3UTR TCA 90 bp GACCGGAGACCCAAAAATGTCGCTGGTCTTCCCTCCAGGTGGGTTCAGGTGCTGTGGGTGTGCCAAGCGTaGAGTGGCAGTGACCGGAGA +
Preference number: 4 (lower is better)
Translates to: DRRPKNVAGLPSRWVQVLWVCQA*SGSDRR
Trigger: TCTCCGGTCACTGCCACTTCACGCTTGGCACACCCA...CAGCACCTGAACCCACCTGGAGGGAAGACCAGCGACATTTTTGGGTCTCCGGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566925.5
CDS-3UTR TCA 90 bp CCCCATTTCATCCCCACAGAGGCATCTCCCAGCCATCTGGAAGGCACGGGTCTCTGGACTACACATGAGTaGTGGCCAGGGGTGCCCCAT +
Preference number: 4 (lower is better)
Translates to: PHFIPTEASPSHLEGTGLWTTHE*WPGVPH
Trigger: ATGGGGCACCCCTGGCCATCACTCATGTGTAGTCCA...GAGACCCGTGCCTTCCAGATGGCTGGGAGATGCCTCTGTGGGGATGAAATGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
CDS-3UTR TCA 90 bp GTCATTCCTAGACATCCAATCAGCTGGCGGGCTGTTGATCCAAGGACCATGCCCCACCCAAGGGCAGCATaGGAACTGGGCCTGCAGCCC +
Preference number: 4 (lower is better)
Translates to: VIPRHPISWRAVDPRTMPHPRAA*ELGLQP
Trigger: GGGCTGCAGGCCCAGTTCTCATGCTGCCCTTGGGTG...GGGCATGGTCCTTGGATCAACAGCCCGCCAGCTGATTGGATGTCTAGGAATGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
CDS-3UTR GCA 90 bp CATCCCCACAGAGGCATCTCCCAGCCATCTGGAAGGCACGGGTCTCCAAGCAGCAGGTGCTGTCGAGTCTaGACGGGGGTTGATTCGTCA +
Preference number: 4 (lower is better)
Translates to: HPHRGISQPSGRHGSPSSRCCRV*TGVDSS
Trigger: TGACGAATCAACCCCCGTGCAGACTCGACAGCACCT...GCTGCTTGGAGACCCGTGCCTTCCAGATGGCTGGGAGATGCCTCTGTGGGGATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000562684.5
CDS-3UTR GCA 90 bp CCCCTTCCAGTTCCTCTCAAACCTGGACTACACATGAGTGATGGCCAGGGGTGCCCAGGTGGGTTCAGGTaGTGTCGAGTCTGCACGGGG +
Preference number: 4 (lower is better)
Translates to: PLPVPLKPGLHMSDGQGCPGGFR*CRVCTG
Trigger: CCCCGTGCAGACTCGACAGCACCTGAACCCACCTGG...GCACCCCTGGCCATCACTCATGTGTAGTCCAGGTTTGAGAGGAACTGGAAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000562684.5
CDS-3UTR GCA 90 bp GGTGCCCCATTTCATCCCCACAGAGGCATCTCCCAGCCATCTGGAAGGCACGGGCTGCTTTTCTGGCGCTaGCTTTCTCACCTGGCTCTG +
Preference number: 4 (lower is better)
Translates to: GAPFHPHRGISQPSGRHGLLFWR*LSHLAL
Trigger: CAGAGCCAGGTGAGAAAGGCAGCGCCAGAAAAGCAG...CCCGTGCCTTCCAGATGGCTGGGAGATGCCTCTGTGGGGATGAAATGGGGCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
CDS-3UTR GCA 90 bp GGGTGCCCCATTTCATCCCCACAGAGGCATCTCCCAGCCATCTGGAAGGCACGGCTGCTTTTCTGGCGCTaGCTTTCTCACCTGGCTCTG +
Preference number: 4 (lower is better)
Translates to: GCPISSPQRHLPAIWKARLLFWR*LSHLAL
Trigger: CAGAGCCAGGTGAGAAAGGCAGCGCCAGAAAAGCAG...CCGTGCCTTCCAGATGGCTGGGAGATGCCTCTGTGGGGATGAAATGGGGCACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
CDS-3UTR GCA 90 bp ACCCTATCTCTTGAGTTTCTGGTCTGGCTCCGGGTGGAGCAGTGGCTTCTCTTAGTGGGCATGGGCTCCTaGTCCTTGGCGGGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: TLSLEFLVWLRVEQWLLLVGMGS*SLAGPA
Trigger: AGCAGGCCCCGCCAAGGAGCAGGAGCCCATGCCCAC...TAAGAGAAGCCACTGCTCCACCCGGAGCCAGACCAGAAACTCAAGAGATAGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561516.5
ENST00000569765.5
CDS-3UTR GCA 90 bp GGTGCCCCATTTCATCCCCACAGAGGCATCTCCCAGCCATCTGGAAGGCACGGGAGGAGATGCTGGATTTaGCTCCCGGTGGGTTCAGGA +
Preference number: 4 (lower is better)
Translates to: GAPFHPHRGISQPSGRHGRRCWI*LPVGSG
Trigger: TCCTGAACCCACCGGGAGGCAAATCCAGCATCTCCT...CCCGTGCCTTCCAGATGGCTGGGAGATGCCTCTGTGGGGATGAAATGGGGCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
CDS-3UTR GCA 90 bp CCATTTCATCCCCACAGAGGCATCTCCCAGCCATCTGGAAGGCACGGGTCTCCATTGATCCAAGGACCATaGCCTGCCCCACCTCCCCAC +
Preference number: 4 (lower is better)
Translates to: PFHPHRGISQPSGRHGSPLIQGP*PAPPPH
Trigger: GTGGGGAGGTGGGGCAGGGCATGGTCCTTGGATCAA...TGGAGACCCGTGCCTTCCAGATGGCTGGGAGATGCCTCTGTGGGGATGAAATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000248098.8
ENST00000561516.5
ENST00000562684.5
CDS-3UTR GCA 90 bp CCCATTTCATCCCCACAGAGGCATCTCCCAGCCATCTGGAAGGCACGGGTCTCCCACTCAGAGCAAAGCTaGTGCCGCCACCCAGACGTT +
Preference number: 4 (lower is better)
Translates to: PISSPQRHLPAIWKARVSHSEQS*CRHPDV
Trigger: AACGTCTGGGTGGCGGCAGCAGCTTTGCTCTGAGTG...GGAGACCCGTGCCTTCCAGATGGCTGGGAGATGCCTCTGTGGGGATGAAATGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
CDS-3UTR GCA 90 bp CCCCATTTCATCCCCACAGAGGCATCTCCCAGCCATCTGGAAGGCACGGGTCTCCACTCAGAGCAAAGCTaGTGCCGCCACCCAGACGTT +
Preference number: 4 (lower is better)
Translates to: PHFIPTEASPSHLEGTGLHSEQS*CRHPDV
Trigger: AACGTCTGGGTGGCGGCAGCAGCTTTGCTCTGAGTG...GAGACCCGTGCCTTCCAGATGGCTGGGAGATGCCTCTGTGGGGATGAAATGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
CDS-3UTR GCA 90 bp GGGTGCCCCATTTCATCCCCACAGAGGCATCTCCCAGCCATCTGGAAGGCACGGCCACACAGCAGGGCTTaGATGCGCAGGAACTCTTCT +
Preference number: 4 (lower is better)
Translates to: GCPISSPQRHLPAIWKARPHSRA*MRRNSS
Trigger: AGAAGAGTTCCTGCGCATGCAAGCCCTGCTGTGTGG...CCGTGCCTTCCAGATGGCTGGGAGATGCCTCTGTGGGGATGAAATGGGGCACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
CDS-3UTR CCA 90 bp CCCATTTCATCCCCACAGAGGCATCTCCCAGCCATCTGGAAGGCACGGGTCTCCGGTCTTCCCTCCAGGTaGGTTCAGGTGCTGTCGAGT +
Preference number: 4 (lower is better)
Translates to: PISSPQRHLPAIWKARVSGLPSR*VQVLSS
Trigger: ACTCGACAGCACCTGAACCCACCTGGAGGGAAGACC...GGAGACCCGTGCCTTCCAGATGGCTGGGAGATGCCTCTGTGGGGATGAAATGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000562684.5
CDS-3UTR CCA 90 bp CCATTTCATCCCCACAGAGGCATCTCCCAGCCATCTGGAAGGCACGGGTCTCCACGGGGCCTGCTTTTCTaGCGCTGCCTTTCTCACCTG +
Preference number: 4 (lower is better)
Translates to: PFHPHRGISQPSGRHGSPRGLLF*RCLSHL
Trigger: CAGGTGAGAAAGGCAGCGCCAGAAAAGCAGGCCCCG...TGGAGACCCGTGCCTTCCAGATGGCTGGGAGATGCCTCTGTGGGGATGAAATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
CDS-3UTR CCA 90 bp GCTACCCTATCTCTTGAGTTTCTGGTCTGGCTCCGGGTGGAGCAGTGGCTTCTCTGGGCTCCTGCTCCTTaGCGGGGCCTGCTTTTCTGG +
Preference number: 4 (lower is better)
Translates to: ATLSLEFLVWLRVEQWLLWAPAP*RGLLFW
Trigger: CCAGAAAAGCAGGCCCCGCCAAGGAGCAGGAGCCCA...GAGAAGCCACTGCTCCACCCGGAGCCAGACCAGAAACTCAAGAGATAGGGTAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
CDS-3UTR CCA 90 bp GGGTGCCCCATTTCATCCCCACAGAGGCATCTCCCAGCCATCTGGAAGGCACGGGGATTTGCCTCCCGGTaGGTTCAGGACCTTGTTGTG +
Preference number: 4 (lower is better)
Translates to: GCPISSPQRHLPAIWKARGFASR*VQDLVV
Trigger: CACAACAAGGTCCTGAACCCACCGGGAGGCAAATCC...CCGTGCCTTCCAGATGGCTGGGAGATGCCTCTGTGGGGATGAAATGGGGCACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
CDS-3UTR CCA 90 bp CCCCATTTCATCCCCACAGAGGCATCTCCCAGCCATCTGGAAGGCACGGGTCTCCTTGAGTTTCTGGTCTaGCTCCGGGTGGAGCAGTGG +
Preference number: 4 (lower is better)
Translates to: PHFIPTEASPSHLEGTGLLEFLV*LRVEQW
Trigger: CCACTGCTCCACCCGGAGCCAGACCAGAAACTCAAG...GAGACCCGTGCCTTCCAGATGGCTGGGAGATGCCTCTGTGGGGATGAAATGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
CDS-3UTR CCA 90 bp CCCCATTTCATCCCCACAGAGGCATCTCCCAGCCATCTGGAAGGCACGGGTCTCCATCTCCCAGCCATCTaGAAGGCACGGGTCTCCAAG +
Preference number: 4 (lower is better)
Translates to: PHFIPTEASPSHLEGTGLHLPAI*KARVSK
Trigger: CTTGGAGACCCGTGCCTTCCAGATGGCTGGGAGATG...GAGACCCGTGCCTTCCAGATGGCTGGGAGATGCCTCTGTGGGGATGAAATGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
CDS-3UTR CCA 90 bp CCCATTTCATCCCCACAGAGGCATCTCCCAGCCATCTGGAAGGCACGGGTCTCCCATCTCCCAGCCATCTaGAAGGCACGGGTCTCCAAG +
Preference number: 4 (lower is better)
Translates to: PISSPQRHLPAIWKARVSHLPAI*KARVSK
Trigger: CTTGGAGACCCGTGCCTTCCAGATGGCTGGGAGATG...GGAGACCCGTGCCTTCCAGATGGCTGGGAGATGCCTCTGTGGGGATGAAATGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
CDS-3UTR CCA 90 bp AGGCACGGGTCTCCAAGCAGCTGTCATGACGGCCAGGAGACGCTGAGCAGCCAGAGACATCCAATCAGCTaGCGGGCTGTTGATCCAAGG +
Preference number: 4 (lower is better)
Translates to: RHGSPSSCHDGQETLSSQRHPIS*RAVDPR
Trigger: CCTTGGATCAACAGCCCGCCAGCTGATTGGATGTCT...CTGGCTGCTCAGCGTCTCCTGGCCGTCATGACAGCTGCTTGGAGACCCGTGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248098.8
ENST00000561516.5
ENST00000562684.5
CDS-3UTR CCA 90 bp CCCCATTTCATCCCCACAGAGGCATCTCCCAGCCATCTGGAAGGCACGGGTCTCGCAGTTGCCATTTCCTaGAACATGTCGACCGCCGCC +
Preference number: 4 (lower is better)
Translates to: PHFIPTEASPSHLEGTGLAVAIS*NMSTAA
Trigger: GGCGGCGGTCGACATGTTCCAGGAAATGGCAACTGC...GAGACCCGTGCCTTCCAGATGGCTGGGAGATGCCTCTGTGGGGATGAAATGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382711.9
CDS-3UTR CCA 90 bp AGCAGGGCTTGCATGCGCAGGAACTCTTCTTCTCCCAGTGAGCAGACTAAGCACCATGGCCCTCTGAAGTaGTGCCCAGGGCCCCTGTCC +
Preference number: 4 (lower is better)
Translates to: SRACMRRNSSSPSEQTKHHGPLK*CPGPLS
Trigger: GGACAGGGGCCCTGGGCACCACTTCAGAGGGCCATG...GTGCTTAGTCTGCTCACTGGGAGAAGAAGAGTTCCTGCGCATGCAAGCCCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562684.5
CDS-3UTR TCA 90 bp GTTCCTCTCAAACCTGGACTACACATGAGTGATGGCCAGGGGTGCCCCATTTCATTCAGGACCTTGTTGTaGGAGCGAGGCCGCGGCCCC +
Preference number: 4 (lower is better)
Translates to: VPLKPGLHMSDGQGCPISFRTLL*ERGRGP
Trigger: GGGGCCGCGGCCTCGCTCTCACAACAAGGTCCTGAA...TGAAATGGGGCACCCCTGGCCATCACTCATGTGTAGTCCAGGTTTGAGAGGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
CDS-3UTR TCA 90 bp TTCATCCCCACAGAGGCATCTCCCAGCCATCTGGAAGGCACGGGTCTCCAAGCAAACCTGGACTACACATaGGTGATGGCCAGGGGTGCC +
Preference number: 4 (lower is better)
Translates to: FIPTEASPSHLEGTGLQANLDYT*VMARGA
Trigger: GGCACCCCTGGCCATCACTCATGTGTAGTCCAGGTT...TGCTTGGAGACCCGTGCCTTCCAGATGGCTGGGAGATGCCTCTGTGGGGATGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
CDS-3UTR TCA 90 bp TGGCTCCGGGTGGAGCAGTGGCTTCTCTTAGTAGAAGGAGATGCTGGATTTGCCCAGCTGGCGGGCTGTTaGTCCAAGGACCATGCCCTG +
Preference number: 4 (lower is better)
Translates to: WLRVEQWLLLVEGDAGFAQLAGC*SKDHAL
Trigger: CAGGGCATGGTCCTTGGATCAACAGCCCGCCAGCTG...GGCAAATCCAGCATCTCCTTCTACTAAGAGAAGCCACTGCTCCACCCGGAGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561516.5
CDS-3UTR GCA 90 bp AAGCGTGAAGTGGCAGTGACCGGAGACCCAAAAATGTCGCTGGTCTTCCCTCCACCAGGTGGGTTCAGGTaGTGTCGAGTCTGCACGGGG +
Preference number: 4 (lower is better)
Translates to: KREVAVTGDPKMSLVFPPPGGFR*CRVCTG
Trigger: CCCCGTGCAGACTCGACAGCACCTGAACCCACCTGG...TGGAGGGAAGACCAGCGACATTTTTGGGTCTCCGGTCACTGCCACTTCACGCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566925.5
CDS-3UTR GCA 90 bp TTCATCCCCACAGAGGCATCTCCCAGCCATCTGGAAGGCACGGGTCTCCAAGCATTTCTCACCTGGCTCTaGTCCAGCCGGGATGCTCCT +
Preference number: 4 (lower is better)
Translates to: FIPTEASPSHLEGTGLQAFLTWL*SSRDAP
Trigger: AGGAGCATCCCGGCTGGAGCAGAGCCAGGTGAGAAA...TGCTTGGAGACCCGTGCCTTCCAGATGGCTGGGAGATGCCTCTGTGGGGATGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
CDS-3UTR GCA 90 bp GTGCCCCATTTCATCCCCACAGAGGCATCTCCCAGCCATCTGGAAGGCACGGGTCTGCTTTTCTGGCGCTaGCTTTCTCACCTGGCTCTG +
Preference number: 4 (lower is better)
Translates to: VPHFIPTEASPSHLEGTGLLFWR*LSHLAL
Trigger: CAGAGCCAGGTGAGAAAGGCAGCGCCAGAAAAGCAG...ACCCGTGCCTTCCAGATGGCTGGGAGATGCCTCTGTGGGGATGAAATGGGGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
CDS-3UTR GCA 90 bp CCCCATTTCATCCCCACAGAGGCATCTCCCAGCCATCTGGAAGGCACGGGTCTCAGGAGATGCTGGATTTaGCTCCCGGTGGGTTCAGGA +
Preference number: 4 (lower is better)
Translates to: PHFIPTEASPSHLEGTGLRRCWI*LPVGSG
Trigger: TCCTGAACCCACCGGGAGGCAAATCCAGCATCTCCT...GAGACCCGTGCCTTCCAGATGGCTGGGAGATGCCTCTGTGGGGATGAAATGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
CDS-3UTR GCA 90 bp CTTCCAGTTCCTCTCAAACCTGGACTACACATGAGTGATGGCCAGGGGTGCCCCTTGATCCAAGGACCATaGCCTGCCCCACCTCCCCAC +
Preference number: 4 (lower is better)
Translates to: LPVPLKPGLHMSDGQGCPLIQGP*PAPPPH
Trigger: GTGGGGAGGTGGGGCAGGGCATGGTCCTTGGATCAA...GGGGCACCCCTGGCCATCACTCATGTGTAGTCCAGGTTTGAGAGGAACTGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000248098.8
ENST00000561516.5
ENST00000562684.5
CDS-3UTR GCA 90 bp ATCCAATCAGCTGGCGGGCTGTTGATCCAAGGACCATGCCCTGCCCCACCTCCCTCCTCTGTTAACAGATaGCCACCCAAGGGCAGCATG +
Preference number: 4 (lower is better)
Translates to: IQSAGGLLIQGPCPAPPPSSVNR*PPKGSM
Trigger: CATGCTGCCCTTGGGTGGGCATCTGTTAACAGAGGA...GGGAGGTGGGGCAGGGCATGGTCCTTGGATCAACAGCCCGCCAGCTGATTGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
CDS-3UTR GCA 90 bp GGGTGCCCCATTTCATCCCCACAGAGGCATCTCCCAGCCATCTGGAAGGCACGGTCCTCACCTATGCATTaGAAGCCAGGTCAGAGGCAG +
Preference number: 4 (lower is better)
Translates to: GCPISSPQRHLPAIWKARSSPMH*KPGQRQ
Trigger: CTGCCTCTGACCTGGCTTGCAATGCATAGGTGAGGA...CCGTGCCTTCCAGATGGCTGGGAGATGCCTCTGTGGGGATGAAATGGGGCACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000248098.8
CDS-3UTR GCA 90 bp GACCGGAGACCCAAAAATGTCGCTGGTCTTCCCTCCAGGTGGGTTCAGGTGCTGCTTCCTGTCAGCAGTTaGCATTTCCTGGAGCCGGCG +
Preference number: 4 (lower is better)
Translates to: DRRPKNVAGLPSRWVQVLLPVSS*HFLEPA
Trigger: CGCCGGCTCCAGGAAATGGCAACTGCTGACAGGAAG...CAGCACCTGAACCCACCTGGAGGGAAGACCAGCGACATTTTTGGGTCTCCGGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566925.5
CDS-3UTR CCA 90 bp TTCATCCCCACAGAGGCATCTCCCAGCCATCTGGAAGGCACGGGTCTCCAAGCAGGTCTTCCCTCCAGGTaGGTTCAGGTGCTGTCGAGT +
Preference number: 4 (lower is better)
Translates to: FIPTEASPSHLEGTGLQAGLPSR*VQVLSS
Trigger: ACTCGACAGCACCTGAACCCACCTGGAGGGAAGACC...TGCTTGGAGACCCGTGCCTTCCAGATGGCTGGGAGATGCCTCTGTGGGGATGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000562684.5
CDS-3UTR CCA 90 bp GGGTGCCCCATTTCATCCCCACAGAGGCATCTCCCAGCCATCTGGAAGGCACGGACCCAAAAATGTCGCTaGTCTTCCCTCCAGGTGGGT +
Preference number: 4 (lower is better)
Translates to: GCPISSPQRHLPAIWKARTQKCR*SSLQVG
Trigger: ACCCACCTGGAGGGAAGACCAGCGACATTTTTGGGT...CCGTGCCTTCCAGATGGCTGGGAGATGCCTCTGTGGGGATGAAATGGGGCACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000562684.5
CDS-3UTR CCA 90 bp AGTGGCAGTGACCGGAGACCCAAAAATGTCGCTGGTCTTCCCTCCAGGTGGGTTGCTGCCTTTCTCACCTaGCTCTGCTCCAGCCGGGAT +
Preference number: 4 (lower is better)
Translates to: SGSDRRPKNVAGLPSRWVAAFLT*LCSSRD
Trigger: ATCCCGGCTGGAGCAGAGCCAGGTGAGAAAGGCAGC...AACCCACCTGGAGGGAAGACCAGCGACATTTTTGGGTCTCCGGTCACTGCCACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566925.5
CDS-3UTR CCA 90 bp TGCAAGGGCTGGGAGAATCACAGGGCCCAGTACCGTCACGTCCTATTTCTTCCTTGGGCTCCTGCTCCTTaGCGGGGCCTGCTTTTCTGG +
Preference number: 4 (lower is better)
Translates to: CKGWENHRAQYRHVLFLPWAPAP*RGLLFW
Trigger: CCAGAAAAGCAGGCCCCGCCAAGGAGCAGGAGCCCA...AGGAAGAAATAGGACGTGACGGTACTGGGCCCTGTGATTCTCCCAGCCCTTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
CDS-3UTR CCA 90 bp CTCCGGGTGGAGCAGTGGCTTCTCTTAGTAGAAGGAGATGCTGGATTTGCCTCCTGTCGACTGTGGGCATaGGCTCCTGCTCCTTGGCGG +
Preference number: 4 (lower is better)
Translates to: LRVEQWLLLVEGDAGFASCRLWA*APAPWR
Trigger: CCGCCAAGGAGCAGGAGCCCATGCCCACAGTCGACA...GGAGGCAAATCCAGCATCTCCTTCTACTAAGAGAAGCCACTGCTCCACCCGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561516.5
ENST00000569765.5
CDS-3UTR CCA 90 bp CCTCCCAAATGTAAACGACAGCCACACAGCAGGGCTTGCATGCGCAGGAACTCTTGTCGACTGTGGGCATaGGCTCCTGCTCCTTGGCGG +
Preference number: 4 (lower is better)
Translates to: PPKCKRQPHSRACMRRNSCRLWA*APAPWR
Trigger: CCGCCAAGGAGCAGGAGCCCATGCCCACAGTCGACA...AGAGTTCCTGCGCATGCAAGCCCTGCTGTGTGGCTGTCGTTTACATTTGGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
CDS-3UTR CCA 90 bp GTGCCCCATTTCATCCCCACAGAGGCATCTCCCAGCCATCTGGAAGGCACGGGTGGATTTGCCTCCCGGTaGGTTCAGGACCTTGTTGTG +
Preference number: 4 (lower is better)
Translates to: VPHFIPTEASPSHLEGTGGFASR*VQDLVV
Trigger: CACAACAAGGTCCTGAACCCACCGGGAGGCAAATCC...ACCCGTGCCTTCCAGATGGCTGGGAGATGCCTCTGTGGGGATGAAATGGGGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
CDS-3UTR CCA 90 bp GGTGCCCCATTTCATCCCCACAGAGGCATCTCCCAGCCATCTGGAAGGCACGGGAGTAGAAGGAGATGCTaGATTTGCCTCCCGGTGGGT +
Preference number: 4 (lower is better)
Translates to: GAPFHPHRGISQPSGRHGSRRRC*ICLPVG
Trigger: ACCCACCGGGAGGCAAATCCAGCATCTCCTTCTACT...CCCGTGCCTTCCAGATGGCTGGGAGATGCCTCTGTGGGGATGAAATGGGGCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
CDS-3UTR CCA 90 bp CATCCCCACAGAGGCATCTCCCAGCCATCTGGAAGGCACGGGTCTCCAAGCAGCAGTAGAAGGAGATGCTaGATTTGCCTCCCGGTGGGT +
Preference number: 4 (lower is better)
Translates to: HPHRGISQPSGRHGSPSSSRRRC*ICLPVG
Trigger: ACCCACCGGGAGGCAAATCCAGCATCTCCTTCTACT...GCTGCTTGGAGACCCGTGCCTTCCAGATGGCTGGGAGATGCCTCTGTGGGGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
CDS-3UTR CCA 90 bp CATCCCCACAGAGGCATCTCCCAGCCATCTGGAAGGCACGGGTCTCCAAGCAGCCTCCGGGTGGAGCAGTaGCTTCTCTTAGTAGAAGGA +
Preference number: 4 (lower is better)
Translates to: HPHRGISQPSGRHGSPSSLRVEQ*LLLVEG
Trigger: TCCTTCTACTAAGAGAAGCCACTGCTCCACCCGGAG...GCTGCTTGGAGACCCGTGCCTTCCAGATGGCTGGGAGATGCCTCTGTGGGGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
CDS-3UTR CCA 90 bp TTCATCCCCACAGAGGCATCTCCCAGCCATCTGGAAGGCACGGGTCTCCAAGCACTTGAGTTTCTGGTCTaGCTCCGGGTGGAGCAGTGG +
Preference number: 4 (lower is better)
Translates to: FIPTEASPSHLEGTGLQALEFLV*LRVEQW
Trigger: CCACTGCTCCACCCGGAGCCAGACCAGAAACTCAAG...TGCTTGGAGACCCGTGCCTTCCAGATGGCTGGGAGATGCCTCTGTGGGGATGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
CDS-3UTR CCA 90 bp TGCAAGGGCTGGGAGAATCACAGGGCCCAGTACCGTCACGTCCTATTTCTTCCTGCGGACTGCAAGGGCTaGGAGAATCACAGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: CKGWENHRAQYRHVLFLPADCKG*ENHRAQ
Trigger: CTGGGCCCTGTGATTCTCCCAGCCCTTGCAGTCCGC...AGGAAGAAATAGGACGTGACGGTACTGGGCCCTGTGATTCTCCCAGCCCTTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
CDS-3UTR CCA 90 bp ATGGCTACCCTATCTCTTGAGTTTCTGGTCTGGCTCCGGGTGGAGCAGTGGCTTCTCCTGGGGGCTTCATaGCCCTCTGAAGTGGTGCCC +
Preference number: 4 (lower is better)
Translates to: MATLSLEFLVWLRVEQWLLLGAS*PSEVVP
Trigger: GGGCACCACTTCAGAGGGCCATGAAGCCCCCAGGAG...AAGCCACTGCTCCACCCGGAGCCAGACCAGAAACTCAAGAGATAGGGTAGCCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382711.9
ENST00000562684.5
ENST00000569765.5
CDS-3UTR CCA 90 bp CTTCCAGTTCCTCTCAAACCTGGACTACACATGAGTGATGGCCAGGGGTGCCCCGCTCGATTCTCCTCCTaGGGGCTTCATGGCCCTCTG +
Preference number: 4 (lower is better)
Translates to: LPVPLKPGLHMSDGQGCPARFSS*GLHGPL
Trigger: CAGAGGGCCATGAAGCCCCCAGGAGGAGAATCGAGC...GGGGCACCCCTGGCCATCACTCATGTGTAGTCCAGGTTTGAGAGGAACTGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000562684.5
ENST00000569765.5
CDS-3UTR TCA 90 bp GGTGCCCCATTTCATCCCCACAGAGGCATCTCCCAGCCATCTGGAAGGCACGGGAGTCTGCACGGGGGTTaGTTCGTCAAAGATACCACT +
Preference number: 4 (lower is better)
Translates to: GAPFHPHRGISQPSGRHGSLHGG*FVKDTT
Trigger: AGTGGTATCTTTGACGAATCAACCCCCGTGCAGACT...CCCGTGCCTTCCAGATGGCTGGGAGATGCCTCTGTGGGGATGAAATGGGGCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000562684.5
CDS-3UTR TCA 90 bp AAAACATGGCTACCCTATCTCTTGAGTTTCTGGTCTGGCTCCGGGTGGAGCAGTTTCAGGACCTTGTTGTaGGAGCGAGGCCGCGGCCCC +
Preference number: 4 (lower is better)
Translates to: KTWLPYLLSFWSGSGWSSFRTLL*ERGRGP
Trigger: GGGGCCGCGGCCTCGCTCTCACAACAAGGTCCTGAA...ACTGCTCCACCCGGAGCCAGACCAGAAACTCAAGAGATAGGGTAGCCATGTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
CDS-3UTR TCA 90 bp TTCATCCCCACAGAGGCATCTCCCAGCCATCTGGAAGGCACGGGTCTCCAAGCAGGCTACCCTATCTCTTaGGTTTCTGGTCTGGCTCCG +
Preference number: 4 (lower is better)
Translates to: FIPTEASPSHLEGTGLQAGYPIS*VSGLAP
Trigger: CGGAGCCAGACCAGAAACTCAAGAGATAGGGTAGCC...TGCTTGGAGACCCGTGCCTTCCAGATGGCTGGGAGATGCCTCTGTGGGGATGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
CDS-3UTR TCA 90 bp ATGGCTACCCTATCTCTTGAGTTTCTGGTCTGGCTCCGGGTGGAGCAGTGGCTTTCCAAGCAGCTGTCATaGCGGCCAGGAGACGCTGAG +
Preference number: 4 (lower is better)
Translates to: MATLSLEFLVWLRVEQWLSKQLS*RPGDAE
Trigger: CTCAGCGTCTCCTGGCCGTCATGACAGCTGCTTGGA...AAGCCACTGCTCCACCCGGAGCCAGACCAGAAACTCAAGAGATAGGGTAGCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
CDS-3UTR TCA 90 bp CTTCCAGTTCCTCTCAAACCTGGACTACACATGAGTGATGGCCAGGGGTGCCCCTGGACTACACATGAGTaGTGGCCAGGGGTGCCCCAT +
Preference number: 4 (lower is better)
Translates to: LPVPLKPGLHMSDGQGCPWTTHE*WPGVPH
Trigger: ATGGGGCACCCCTGGCCATCACTCATGTGTAGTCCA...GGGGCACCCCTGGCCATCACTCATGTGTAGTCCAGGTTTGAGAGGAACTGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
CDS-3UTR TCA 90 bp CTTCCAGTTCCTCTCAAACCTGGACTACACATGAGTGATGGCCAGGGGTGCCCCAACCTGGACTACACATaGGTGATGGCCAGGGGTGCC +
Preference number: 4 (lower is better)
Translates to: LPVPLKPGLHMSDGQGCPNLDYT*VMARGA
Trigger: GGCACCCCTGGCCATCACTCATGTGTAGTCCAGGTT...GGGGCACCCCTGGCCATCACTCATGTGTAGTCCAGGTTTGAGAGGAACTGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
CDS-3UTR TCA 90 bp CCATTTCATCCCCACAGAGGCATCTCCCAGCCATCTGGAAGGCACGGGTCTCCACAGGCACTTAAGCAGTaGGGCAGCATGAGCCTGACT +
Preference number: 4 (lower is better)
Translates to: PFHPHRGISQPSGRHGSPQALKQ*GSMSLT
Trigger: AGTCAGGCTCATGCTGCCTCACTGCTTAAGTGCCTG...TGGAGACCCGTGCCTTCCAGATGGCTGGGAGATGCCTCTGTGGGGATGAAATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
CDS-3UTR GCA 90 bp ACCCAGAAGTCCCTGCCAGGGGCGGAAGTAAAGAGCTTTTCCTCTCACCTAGCGTTTCTCACCTGGCTCTaGTCCAGCCGGGATGCTCCT +
Preference number: 4 (lower is better)
Translates to: TQKSLPGAEVKSFSSHLAFLTWL*SSRDAP
Trigger: AGGAGCATCCCGGCTGGAGCAGAGCCAGGTGAGAAA...CGCTAGGTGAGAGGAAAAGCTCTTTACTTCCGCCCCTGGCAGGGACTTCTGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
CDS-3UTR GCA 90 bp CTTCCAGTTCCTCTCAAACCTGGACTACACATGAGTGATGGCCAGGGGTGCCCCTTTCTCACCTGGCTCTaGTCCAGCCGGGATGCTCCT +
Preference number: 4 (lower is better)
Translates to: LPVPLKPGLHMSDGQGCPFLTWL*SSRDAP
Trigger: AGGAGCATCCCGGCTGGAGCAGAGCCAGGTGAGAAA...GGGGCACCCCTGGCCATCACTCATGTGTAGTCCAGGTTTGAGAGGAACTGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
CDS-3UTR GCA 90 bp TGCAAGGGCTGGGAGAATCACAGGGCCCAGTACCGTCACGTCCTATTTCTTCCTCTCCTTGGCGGGGCCTaGTTTTCTGGCGCTGCCTTT +
Preference number: 4 (lower is better)
Translates to: CKGWENHRAQYRHVLFLPLLGGA*FSGAAF
Trigger: AAAGGCAGCGCCAGAAAAGCAGGCCCCGCCAAGGAG...AGGAAGAAATAGGACGTGACGGTACTGGGCCCTGTGATTCTCCCAGCCCTTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
CDS-3UTR GCA 90 bp CCATTTCATCCCCACAGAGGCATCTCCCAGCCATCTGGAAGGCACGGGTCTCCAGTTGACAAAGCCTTGTaGAGACCCCAGTGTGCCAGG +
Preference number: 4 (lower is better)
Translates to: PFHPHRGISQPSGRHGSPVDKAL*RPQCAR
Trigger: CCTGGCACACTGGGGTCTGCACAAGGCTTTGTCAAC...TGGAGACCCGTGCCTTCCAGATGGCTGGGAGATGCCTCTGTGGGGATGAAATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
CDS-3UTR GCA 90 bp TTCATCCCCACAGAGGCATCTCCCAGCCATCTGGAAGGCACGGGTCTCCAAGCATCTCACCTAGCGGACTaGAAGGGCTGGGAGAATCAC +
Preference number: 4 (lower is better)
Translates to: FIPTEASPSHLEGTGLQASHLAD*KGWENH
Trigger: GTGATTCTCCCAGCCCTTGCAGTCCGCTAGGTGAGA...TGCTTGGAGACCCGTGCCTTCCAGATGGCTGGGAGATGCCTCTGTGGGGATGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
CDS-3UTR GCA 90 bp GTGCCCCATTTCATCCCCACAGAGGCATCTCCCAGCCATCTGGAAGGCACGGGTACAGCAGGGCTTGCATaGGCAGGAACTCTTCTTCTC +
Preference number: 4 (lower is better)
Translates to: VPHFIPTEASPSHLEGTGTAGLA*AGTLLL
Trigger: GAGAAGAAGAGTTCCTGCGCATGCAAGCCCTGCTGT...ACCCGTGCCTTCCAGATGGCTGGGAGATGCCTCTGTGGGGATGAAATGGGGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
CDS-3UTR CCA 90 bp CCCCATTTCATCCCCACAGAGGCATCTCCCAGCCATCTGGAAGGCACGGGTCTCACTTCCTTTACCCCCTaGGGGATTTGTCCTCTTGGG +
Preference number: 4 (lower is better)
Translates to: PHFIPTEASPSHLEGTGLTSFTP*GICPLG
Trigger: CCCAAGAGGACAAATCCCCCAGGGGGTAAAGGAAGT...GAGACCCGTGCCTTCCAGATGGCTGGGAGATGCCTCTGTGGGGATGAAATGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000562684.5
CDS-3UTR CCA 90 bp GCTACCCTATCTCTTGAGTTTCTGGTCTGGCTCCGGGTGGAGCAGTGGCTTCTCGGTCTTCCCTCCAGGTaGGTTCAGGTGCTGTCGAGT +
Preference number: 4 (lower is better)
Translates to: ATLSLEFLVWLRVEQWLLGLPSR*VQVLSS
Trigger: ACTCGACAGCACCTGAACCCACCTGGAGGGAAGACC...GAGAAGCCACTGCTCCACCCGGAGCCAGACCAGAAACTCAAGAGATAGGGTAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000562684.5
CDS-3UTR CCA 90 bp TCCTTGGGTTTGTTTGGGTGTGCCAAGCGTGAAGTGGCAGTGACCGGAGACCCAGGTCTTCCCTCCAGGTaGGTTCAGGTGCTGTCGAGT +
Preference number: 4 (lower is better)
Translates to: SLGLFGCAKREVAVTGDPGLPSR*VQVLSS
Trigger: ACTCGACAGCACCTGAACCCACCTGGAGGGAAGACC...TGGGTCTCCGGTCACTGCCACTTCACGCTTGGCACACCCAAACAAACCCAAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566925.5
CDS-3UTR CCA 90 bp CCCCATTTCATCCCCACAGAGGCATCTCCCAGCCATCTGGAAGGCACGGGTCTCACCCAAAAATGTCGCTaGTCTTCCCTCCAGGTGGGT +
Preference number: 4 (lower is better)
Translates to: PHFIPTEASPSHLEGTGLTQKCR*SSLQVG
Trigger: ACCCACCTGGAGGGAAGACCAGCGACATTTTTGGGT...GAGACCCGTGCCTTCCAGATGGCTGGGAGATGCCTCTGTGGGGATGAAATGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000562684.5
CDS-3UTR CCA 90 bp CCCATTTCATCCCCACAGAGGCATCTCCCAGCCATCTGGAAGGCACGGGTCTCCACCCAAAAATGTCGCTaGTCTTCCCTCCAGGTGGGT +
Preference number: 4 (lower is better)
Translates to: PISSPQRHLPAIWKARVSTQKCR*SSLQVG
Trigger: ACCCACCTGGAGGGAAGACCAGCGACATTTTTGGGT...GGAGACCCGTGCCTTCCAGATGGCTGGGAGATGCCTCTGTGGGGATGAAATGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000562684.5
CDS-3UTR CCA 90 bp GTTTCTGCTTACGCCTCCTCCATCCCACAGCAGCAGTGGACAGGCTGTTTTGGTGCTGCCTTTCTCACCTaGCTCTGCTCCAGCCGGGAT +
Preference number: 4 (lower is better)
Translates to: VSAYASSIPQQQWTGCFGAAFLT*LCSSRD
Trigger: ATCCCGGCTGGAGCAGAGCCAGGTGAGAAAGGCAGC...ACCAAAACAGCCTGTCCACTGCTGCTGTGGGATGGAGGAGGCGTAAGCAGAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248098.8
ENST00000561516.5
ENST00000562684.5
CDS-3UTR CCA 90 bp GTTCCTCTCAAACCTGGACTACACATGAGTGATGGCCAGGGGTGCCCCATTTCATGTCGACTGTGGGCATaGGCTCCTGCTCCTTGGCGG +
Preference number: 4 (lower is better)
Translates to: VPLKPGLHMSDGQGCPISCRLWA*APAPWR
Trigger: CCGCCAAGGAGCAGGAGCCCATGCCCACAGTCGACA...TGAAATGGGGCACCCCTGGCCATCACTCATGTGTAGTCCAGGTTTGAGAGGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
CDS-3UTR CCA 90 bp CCCATTTCATCCCCACAGAGGCATCTCCCAGCCATCTGGAAGGCACGGGTCTCCCTCCGGGTGGAGCAGTaGCTTCTCTTAGTAGAAGGA +
Preference number: 4 (lower is better)
Translates to: PISSPQRHLPAIWKARVSLRVEQ*LLLVEG
Trigger: TCCTTCTACTAAGAGAAGCCACTGCTCCACCCGGAG...GGAGACCCGTGCCTTCCAGATGGCTGGGAGATGCCTCTGTGGGGATGAAATGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
CDS-3UTR CCA 90 bp CCCCTTCCAGTTCCTCTCAAACCTGGACTACACATGAGTGATGGCCAGGGGTGCCATCTCCCAGCCATCTaGAAGGCACGGGTCTCCAAG +
Preference number: 4 (lower is better)
Translates to: PLPVPLKPGLHMSDGQGCHLPAI*KARVSK
Trigger: CTTGGAGACCCGTGCCTTCCAGATGGCTGGGAGATG...GCACCCCTGGCCATCACTCATGTGTAGTCCAGGTTTGAGAGGAACTGGAAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
CDS-3UTR CCA 90 bp CTTCCAGTTCCTCTCAAACCTGGACTACACATGAGTGATGGCCAGGGGTGCCCCCATCTCCCAGCCATCTaGAAGGCACGGGTCTCCAAG +
Preference number: 4 (lower is better)
Translates to: LPVPLKPGLHMSDGQGCPHLPAI*KARVSK
Trigger: CTTGGAGACCCGTGCCTTCCAGATGGCTGGGAGATG...GGGGCACCCCTGGCCATCACTCATGTGTAGTCCAGGTTTGAGAGGAACTGGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
CDS-3UTR CCA 90 bp CCCCATTTCATCCCCACAGAGGCATCTCCCAGCCATCTGGAAGGCACGGGTCTCAGACATCCAATCAGCTaGCGGGCTGTTGATCCAAGG +
Preference number: 4 (lower is better)
Translates to: PHFIPTEASPSHLEGTGLRHPIS*RAVDPR
Trigger: CCTTGGATCAACAGCCCGCCAGCTGATTGGATGTCT...GAGACCCGTGCCTTCCAGATGGCTGGGAGATGCCTCTGTGGGGATGAAATGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248098.8
ENST00000561516.5
ENST00000562684.5
CDS-3UTR CCA 90 bp ACCCTATCTCTTGAGTTTCTGGTCTGGCTCCGGGTGGAGCAGTGGCTTCTCTTACTCCTGGGGGCTTCATaGCCCTCTGAAGTGGTGCCC +
Preference number: 4 (lower is better)
Translates to: TLSLEFLVWLRVEQWLLLLLGAS*PSEVVP
Trigger: GGGCACCACTTCAGAGGGCCATGAAGCCCCCAGGAG...TAAGAGAAGCCACTGCTCCACCCGGAGCCAGACCAGAAACTCAAGAGATAGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569765.5
CDS-3UTR CCA 90 bp GCTACCCTATCTCTTGAGTTTCTGGTCTGGCTCCGGGTGGAGCAGTGGCTTCTCGCTCGATTCTCCTCCTaGGGGCTTCATGGCCCTCAT +
Preference number: 4 (lower is better)
Translates to: ATLSLEFLVWLRVEQWLLARFSS*GLHGPH
Trigger: ATGAGGGCCATGAAGCCCCCAGGAGGAGAATCGAGC...GAGAAGCCACTGCTCCACCCGGAGCCAGACCAGAAACTCAAGAGATAGGGTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382710.8
CDS-3UTR CCA 90 bp GGCTCACATAAGACTAACCCTCTTCCCACCCCGCTCATTTGGGCAAAAGGAAATGCAGTTGCCATTTCCTaGAGCCGGCGCGGCCGCCCT +
Preference number: 4 (lower is better)
Translates to: GSHKTNPLPTPLIWAKGNAVAIS*SRRGRP
Trigger: AGGGCGGCCGCGCCGGCTCCAGGAAATGGCAACTGC...ATTTCCTTTTGCCCAAATGAGCGGGGTGGGAAGAGGGTTAGTCTTATGTGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562684.5
ENST00000569765.5
CDS-3UTR TCA 90 bp TTCATCCCCACAGAGGCATCTCCCAGCCATCTGGAAGGCACGGGTCTCCAAGCAAGCGTGAAGTGGCAGTaGCCGGAGACCCAAAAATGT +
Preference number: 4 (lower is better)
Translates to: FIPTEASPSHLEGTGLQASVKWQ*PETQKC
Trigger: ACATTTTTGGGTCTCCGGTCACTGCCACTTCACGCT...TGCTTGGAGACCCGTGCCTTCCAGATGGCTGGGAGATGCCTCTGTGGGGATGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000562684.5
CDS-3UTR TCA 90 bp CCATTTCATCCCCACAGAGGCATCTCCCAGCCATCTGGAAGGCACGGGTCTCCAAGCGTGAAGTGGCAGTaGCCGGAGACCCAAAAATGT +
Preference number: 4 (lower is better)
Translates to: PFHPHRGISQPSGRHGSPSVKWQ*PETQKC
Trigger: ACATTTTTGGGTCTCCGGTCACTGCCACTTCACGCT...TGGAGACCCGTGCCTTCCAGATGGCTGGGAGATGCCTCTGTGGGGATGAAATGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000562684.5
CDS-3UTR TCA 90 bp TTGACTTTCATCTCATCTGGCCCCGATCTAGCAGGCAGAATGGTGTGGAGCCTCTGGGTGTGCCAAGCGTaGAGTGGCAGTGACCGGAGA +
Preference number: 4 (lower is better)
Translates to: LTFISSGPDLAGRMVWSLWVCQA*SGSDRR
Trigger: TCTCCGGTCACTGCCACTTCACGCTTGGCACACCCA...GAGGCTCCACACCATTCTGCCTGCTAGATCGGGGCCAGATGAGATGAAAGTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562569.1
CDS-3UTR TCA 90 bp ATGCTGGATTTAGCAGCCGTGATCTCCAGAATGGAAGCGGTTCTGCTAAGAGGTTTCAGGACCTTGTTGTaGGAGCGAGGCCGCGGCCCC +
Preference number: 4 (lower is better)
Translates to: MLDLAAVISRMEAVLLRGFRTLL*ERGRGP
Trigger: GGGGCCGCGGCCTCGCTCTCACAACAAGGTCCTGAA...ACCTCTTAGCAGAACCGCTTCCATTCTGGAGATCACGGCTGCTAAATCCAGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248098.8
ENST00000561516.5
ENST00000562684.5
CDS-3UTR TCA 90 bp GCTACCCTATCTCTTGAGTTTCTGGTCTGGCTCCGGGTGGAGCAGTGGCTTCTCGGCTACCCTATCTCTTaGGTTTCTGGTCTGGCTCCG +
Preference number: 4 (lower is better)
Translates to: ATLSLEFLVWLRVEQWLLGYPIS*VSGLAP
Trigger: CGGAGCCAGACCAGAAACTCAAGAGATAGGGTAGCC...GAGAAGCCACTGCTCCACCCGGAGCCAGACCAGAAACTCAAGAGATAGGGTAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
CDS-3UTR TCA 90 bp CCCATTTCATCCCCACAGAGGCATCTCCCAGCCATCTGGAAGGCACGGGTCTCCGAAGCTGTCTTTGGTTaGCAAAGCCTTGTGCAGACC +
Preference number: 4 (lower is better)
Translates to: PISSPQRHLPAIWKARVSEAVFG*QSLVQT
Trigger: GGTCTGCACAAGGCTTTGTCAACCAAAGACAGCTTC...GGAGACCCGTGCCTTCCAGATGGCTGGGAGATGCCTCTGTGGGGATGAAATGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
CDS-3UTR TCA 90 bp CCCCATTTCATCCCCACAGAGGCATCTCCCAGCCATCTGGAAGGCACGGGTCTCGACAGGACTTGCATATaGCAAGCTCTCTGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: PHFIPTEASPSHLEGTGLDRTCI*QALCFS
Trigger: GGAGAAGCAGAGAGCTTGTCATATGCAAGTCCTGTC...GAGACCCGTGCCTTCCAGATGGCTGGGAGATGCCTCTGTGGGGATGAAATGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000248098.8
CDS-3UTR GCA 90 bp CATCCCCACAGAGGCATCTCCCAGCCATCTGGAAGGCACGGGTCTCCAAGCAGCGACTTCCAAAAAGATTaGTCGATTCTCCTCCTGGGG +
Preference number: 4 (lower is better)
Translates to: HPHRGISQPSGRHGSPSSDFQKD*SILLLG
Trigger: CCCCAGGAGGAGAATCGAGCAATCTTTTTGGAAGTC...GCTGCTTGGAGACCCGTGCCTTCCAGATGGCTGGGAGATGCCTCTGTGGGGATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
CDS-3UTR GCA 90 bp TCATCTGGCCCCGATCTAGCAGGCAGAATGGTGTGGAGCCTCCTAGAGAGGAACAGGTGCTGTCGAGTCTaGACGGGGGTTGATTCGTCA +
Preference number: 4 (lower is better)
Translates to: SSGPDLAGRMVWSLLERNRCCRV*TGVDSS
Trigger: TGACGAATCAACCCCCGTGCAGACTCGACAGCACCT...GTTCCTCTCTAGGAGGCTCCACACCATTCTGCCTGCTAGATCGGGGCCAGATGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562569.1
CDS-3UTR GCA 90 bp AAAACATGGCTACCCTATCTCTTGAGTTTCTGGTCTGGCTCCGGGTGGAGCAGTCCAGGTGGGTTCAGGTaGTGTCGAGTCTGCACGGGG +
Preference number: 4 (lower is better)
Translates to: KTWLPYLLSFWSGSGWSSPGGFR*CRVCTG
Trigger: CCCCGTGCAGACTCGACAGCACCTGAACCCACCTGG...ACTGCTCCACCCGGAGCCAGACCAGAAACTCAAGAGATAGGGTAGCCATGTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000562684.5
CDS-3UTR GCA 90 bp ATGGCTACCCTATCTCTTGAGTTTCTGGTCTGGCTCCGGGTGGAGCAGTGGCTTTTTCTCACCTGGCTCTaGTCCAGCCGGGATGCTCCT +
Preference number: 4 (lower is better)
Translates to: MATLSLEFLVWLRVEQWLFLTWL*SSRDAP
Trigger: AGGAGCATCCCGGCTGGAGCAGAGCCAGGTGAGAAA...AAGCCACTGCTCCACCCGGAGCCAGACCAGAAACTCAAGAGATAGGGTAGCCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
CDS-3UTR GCA 90 bp AGCAGGGCTTGCATGCGCAGGAACTCTTCTTCTCCCAGTGAGCAGACTAAGCACTTTCTCACCTGGCTCTaGTCCAGCCGGGATGCTCCT +
Preference number: 4 (lower is better)
Translates to: SRACMRRNSSSPSEQTKHFLTWL*SSRDAP
Trigger: AGGAGCATCCCGGCTGGAGCAGAGCCAGGTGAGAAA...GTGCTTAGTCTGCTCACTGGGAGAAGAAGAGTTCCTGCGCATGCAAGCCCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
CDS-3UTR GCA 90 bp CTCCGGGTGGAGCAGTGGCTTCTCTTAGTAGAAGGAGATGCTGGATTTGCCTCCTTTCTCACCTGGCTCTaGTCCAGCCGGGATGCTCCT +
Preference number: 4 (lower is better)
Translates to: LRVEQWLLLVEGDAGFASFLTWL*SSRDAP
Trigger: AGGAGCATCCCGGCTGGAGCAGAGCCAGGTGAGAAA...GGAGGCAAATCCAGCATCTCCTTCTACTAAGAGAAGCCACTGCTCCACCCGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561516.5
ENST00000569765.5
CDS-3UTR GCA 90 bp CTGGCTCCGGGTGGAGCAGTGGCTTCTCTTAGTAGAAGGAGATGCTGGATTTGCAGTGATGGCCAGGGGTaGCCCATTTCATCCCCACAG +
Preference number: 4 (lower is better)
Translates to: LAPGGAVASLSRRRCWICSDGQG*PISSPQ
Trigger: CTGTGGGGATGAAATGGGGCACCCCTGGCCATCACT...GCAAATCCAGCATCTCCTTCTACTAAGAGAAGCCACTGCTCCACCCGGAGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561516.5
ENST00000569765.5
CDS-3UTR GCA 90 bp GTGCCCCATTTCATCCCCACAGAGGCATCTCCCAGCCATCTGGAAGGCACGGGTATGGGCAGAGGCTTCTaGCTGAAGATGAAAGCACCA +
Preference number: 4 (lower is better)
Translates to: VPHFIPTEASPSHLEGTGMGRGF*LKMKAP
Trigger: TGGTGCTTTCATCTTCAGGCAGAAGCCTCTGCCCAT...ACCCGTGCCTTCCAGATGGCTGGGAGATGCCTCTGTGGGGATGAAATGGGGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
CDS-3UTR GCA 90 bp GTTTCTGCTTACGCCTCCTCCATCCCACAGCAGCAGTGGACAGGCTGTTTTGGTTTGGCAGGCGGCTCCTaGAGGCACTTAAGCAGTGAG +
Preference number: 4 (lower is better)
Translates to: VSAYASSIPQQQWTGCFGLAGGS*RHLSSE
Trigger: CTCACTGCTTAAGTGCCTGCAGGAGCCGCCTGCCAA...ACCAAAACAGCCTGTCCACTGCTGCTGTGGGATGGAGGAGGCGTAAGCAGAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
CDS-3UTR GCA 90 bp TGCAAGGGCTGGGAGAATCACAGGGCCCAGTACCGTCACGTCCTATTTCTTCCTTTGGCAGGCGGCTCCTaGAGGCACTTAAGCAGTGAG +
Preference number: 4 (lower is better)
Translates to: CKGWENHRAQYRHVLFLPLAGGS*RHLSSE
Trigger: CTCACTGCTTAAGTGCCTGCAGGAGCCGCCTGCCAA...AGGAAGAAATAGGACGTGACGGTACTGGGCCCTGTGATTCTCCCAGCCCTTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
CDS-3UTR GCA 90 bp GGTGCCCCATTTCATCCCCACAGAGGCATCTCCCAGCCATCTGGAAGGCACGGGCTGCCCAGGGGCTTCTaGTGTAGTTCATATTTTCCT +
Preference number: 4 (lower is better)
Translates to: GAPFHPHRGISQPSGRHGLPRGF*CSSYFP
Trigger: AGGAAAATATGAACTACAGCAGAAGCCCCTGGGCAG...CCCGTGCCTTCCAGATGGCTGGGAGATGCCTCTGTGGGGATGAAATGGGGCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
CDS-3UTR GCA 90 bp CCTCCCAAATGTAAACGACAGCCACACAGCAGGGCTTGCATGCGCAGGAACTCTGCTGGGGGAGGTGGATaGCAAACTTCCTGTCAGCAG +
Preference number: 4 (lower is better)
Translates to: PPKCKRQPHSRACMRRNSAGGGG*QTSCQQ
Trigger: CTGCTGACAGGAAGTTTGGCATCCACCTCCCCCAGC...AGAGTTCCTGCGCATGCAAGCCCTGCTGTGTGGCTGTCGTTTACATTTGGGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562684.5
CDS-3UTR GCA 90 bp AGTGGCAGTGACCGGAGACCCAAAAATGTCGCTGGTCTTCCCTCCAGGTGGGTTCAGAAACCAAGCGTGTaGTGGCCGACCTCTGAAGTG +
Preference number: 4 (lower is better)
Translates to: SGSDRRPKNVAGLPSRWVQKPSV*WPTSEV
Trigger: CACTTCAGAGGTCGGCCAGCACACGCTTGGTTTCTG...AACCCACCTGGAGGGAAGACCAGCGACATTTTTGGGTCTCCGGTCACTGCCACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566925.5
CDS-3UTR CCA 90 bp CTTTCAGTCATTCCTAGACATCCAATCAGCTGGCGGGCTGTTGATCCAAGGACCTCGCTATCCGGGACCTaGAACATGTCGACCGCCGCC +
Preference number: 4 (lower is better)
Translates to: LSVIPRHPISWRAVDPRTSLSGT*NMSTAA
Trigger: GGCGGCGGTCGACATGTTCCAGGTCCCGGATAGCGA...GGTCCTTGGATCAACAGCCCGCCAGCTGATTGGATGTCTAGGAATGACTGAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248098.8
ENST00000561516.5
ENST00000562684.5
CDS-3UTR CCA 90 bp GTTCCTCTCAAACCTGGACTACACATGAGTGATGGCCAGGGGTGCCCCATTTCACATGGCTGTCGACTGTaGGCATGGGCTCCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: VPLKPGLHMSDGQGCPISHGCRL*AWAPAP
Trigger: AGGAGCAGGAGCCCATGCCCACAGTCGACAGCCATG...TGAAATGGGGCACCCCTGGCCATCACTCATGTGTAGTCCAGGTTTGAGAGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
CDS-3UTR CCA 90 bp CCCCATTTCATCCCCACAGAGGCATCTCCCAGCCATCTGGAAGGCACGGGTCTCGGGGGAAGCTGTCTTTaGTTGACAAAGCCTTGTGCA +
Preference number: 4 (lower is better)
Translates to: PHFIPTEASPSHLEGTGLGGSCL*LTKPCA
Trigger: TGCACAAGGCTTTGTCAACCAAAGACAGCTTCCCCC...GAGACCCGTGCCTTCCAGATGGCTGGGAGATGCCTCTGTGGGGATGAAATGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
CDS-3UTR CCA 90 bp AGGCACGGGTCTCCAAGCAGCTGTCATGACGGCCAGGAGACGCTGAGCAGCCAGACACAGAGTGTTTCTTaGCTCCAAAGTCTACAGGCA +
Preference number: 4 (lower is better)
Translates to: RHGSPSSCHDGQETLSSQTQSVS*LQSLQA
Trigger: TGCCTGTAGACTTTGGAGCCAAGAAACACTCTGTGT...CTGGCTGCTCAGCGTCTCCTGGCCGTCATGACAGCTGCTTGGAGACCCGTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
CDS-3UTR CCA 90 bp TTGATTCGTCAAAGATACCACTTCCTTTACCCCCTGGGGGATTTGTCCTCTTGGGGCCGACCTCTGAAGTaGTGCCCAGGGCCCCTGTCC +
Preference number: 4 (lower is better)
Translates to: LIRQRYHFLYPLGDLSSWGRPLK*CPGPLS
Trigger: GGACAGGGGCCCTGGGCACCACTTCAGAGGTCGGCC...CCAAGAGGACAAATCCCCCAGGGGGTAAAGGAAGTGGTATCTTTGACGAATCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000566925.5
CDS-3UTR TCA 90 bp CCCATTTCATCCCCACAGAGGCATCTCCCAGCCATCTGGAAGGCACGGGTCTCCCTCTTGGGTATGTTCTaGGGTTCTTCTGTTGGTCCA +
Preference number: 4 (lower is better)
Translates to: PISSPQRHLPAIWKARVSLLGMF*GSSVGP
Trigger: TGGACCAACAGAAGAACCTCAGAACATACCCAAGAG...GGAGACCCGTGCCTTCCAGATGGCTGGGAGATGCCTCTGTGGGGATGAAATGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
CDS-3UTR TCA 90 bp CCCCTTCCAGTTCCTCTCAAACCTGGACTACACATGAGTGATGGCCAGGGGTGCAGCGTGAAGTGGCAGTaGCCGGAGACCCAAAAATGT +
Preference number: 4 (lower is better)
Translates to: PLPVPLKPGLHMSDGQGCSVKWQ*PETQKC
Trigger: ACATTTTTGGGTCTCCGGTCACTGCCACTTCACGCT...GCACCCCTGGCCATCACTCATGTGTAGTCCAGGTTTGAGAGGAACTGGAAGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000562684.5
CDS-3UTR TCA 90 bp CTGGCTCCGGGTGGAGCAGTGGCTTCTCTTAGTAGAAGGAGATGCTGGATTTGCGGCTACCCTATCTCTTaGGTTTCTGGTCTGGCTCCG +
Preference number: 4 (lower is better)
Translates to: LAPGGAVASLSRRRCWICGYPIS*VSGLAP
Trigger: CGGAGCCAGACCAGAAACTCAAGAGATAGGGTAGCC...GCAAATCCAGCATCTCCTTCTACTAAGAGAAGCCACTGCTCCACCCGGAGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561516.5
ENST00000569765.5
CDS-3UTR TCA 90 bp CTTTCAGTCATTCCTAGACATCCAATCAGCTGGCGGGCTGTTGATCCAAGGACCTCCAAGCAGCTGTCATaGCGGCCAGGAGACGCTGAG +
Preference number: 4 (lower is better)
Translates to: LSVIPRHPISWRAVDPRTSKQLS*RPGDAE
Trigger: CTCAGCGTCTCCTGGCCGTCATGACAGCTGCTTGGA...GGTCCTTGGATCAACAGCCCGCCAGCTGATTGGATGTCTAGGAATGACTGAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248098.8
ENST00000561516.5
ENST00000562684.5
CDS-3UTR TCA 90 bp ACCCAGAAGTCCCTGCCAGGGGCGGAAGTAAAGAGCTTTTCCTCTCACCTAGCGCAGCATGAGCCTGACTaGACATGGCTGCTGCTTTTC +
Preference number: 4 (lower is better)
Translates to: TQKSLPGAEVKSFSSHLAQHEPD*TWLLLF
Trigger: GAAAAGCAGCAGCCATGTTCAGTCAGGCTCATGCTG...CGCTAGGTGAGAGGAAAAGCTCTTTACTTCCGCCCCTGGCAGGGACTTCTGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
CDS-3UTR TCA 90 bp GCTACCCTATCTCTTGAGTTTCTGGTCTGGCTCCGGGTGGAGCAGTGGCTTCTCAGGGACACACACAACTaGCAGGCAAAAGCTCTGAGC +
Preference number: 4 (lower is better)
Translates to: ATLSLEFLVWLRVEQWLLRDTHN*QAKALS
Trigger: GCTCAGAGCTTTTGCCTGTCAGTTGTGTGTGTCCCT...GAGAAGCCACTGCTCCACCCGGAGCCAGACCAGAAACTCAAGAGATAGGGTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
CDS-3UTR TCA 90 bp CTTTCAGTCATTCCTAGACATCCAATCAGCTGGCGGGCTGTTGATCCAAGGACCACTCCTGAGCTCAAGTaGTCCTCCCACCCTGGCCTC +
Preference number: 4 (lower is better)
Translates to: LSVIPRHPISWRAVDPRTTPELK*SSHPGL
Trigger: GAGGCCAGGGTGGGAGGATCACTTGAGCTCAGGAGT...GGTCCTTGGATCAACAGCCCGCCAGCTGATTGGATGTCTAGGAATGACTGAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000248098.8
CDS-3UTR TCA 90 bp GGCCCCGATCTAGCAGGCAGAATGGTGTGGAGCCTCCTAGAGAGGAACTCTCAGCTCAGGCTCACAGTCTaGGAAGTTTACCCTGAATCC +
Preference number: 4 (lower is better)
Translates to: GPDLAGRMVWSLLERNSQLRLTV*EVYPES
Trigger: GGATTCAGGGTAAACTTCTCAGACTGTGAGCCTGAG...CTGAGAGTTCCTCTCTAGGAGGCTCCACACCATTCTGCCTGCTAGATCGGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562569.1
CDS-3UTR GCA 90 bp CCCCATTTCATCCCCACAGAGGCATCTCCCAGCCATCTGGAAGGCACGGGTCTCGACTTCCAAAAAGATTaGTCGATTCTCCTCCTGGGG +
Preference number: 4 (lower is better)
Translates to: PHFIPTEASPSHLEGTGLDFQKD*SILLLG
Trigger: CCCCAGGAGGAGAATCGAGCAATCTTTTTGGAAGTC...GAGACCCGTGCCTTCCAGATGGCTGGGAGATGCCTCTGTGGGGATGAAATGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
CDS-3UTR GCA 90 bp CCCATTTCATCCCCACAGAGGCATCTCCCAGCCATCTGGAAGGCACGGGTCTCCGACTTCCAAAAAGATTaGTCGATTCTCCTCCTGGGG +
Preference number: 4 (lower is better)
Translates to: PISSPQRHLPAIWKARVSDFQKD*SILLLG
Trigger: CCCCAGGAGGAGAATCGAGCAATCTTTTTGGAAGTC...GGAGACCCGTGCCTTCCAGATGGCTGGGAGATGCCTCTGTGGGGATGAAATGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
CDS-3UTR GCA 90 bp GGCTCACATAAGACTAACCCTCTTCCCACCCCGCTCATTTGGGCAAAAGGAAATCCAGGTGGGTTCAGGTaGTGTCGAGTCTGCACGGGG +
Preference number: 4 (lower is better)
Translates to: GSHKTNPLPTPLIWAKGNPGGFR*CRVCTG
Trigger: CCCCGTGCAGACTCGACAGCACCTGAACCCACCTGG...ATTTCCTTTTGCCCAAATGAGCGGGGTGGGAAGAGGGTTAGTCTTATGTGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000562684.5
CDS-3UTR GCA 90 bp CTTTCTCAAGCGTTGACTTTCATCTCATCTGGCCCCGATCTAGCAGGCAGAATGCCAGGTGGGTTCAGGTaGTGTCGAGTCTGCACGGGG +
Preference number: 4 (lower is better)
Translates to: LSQALTFISSGPDLAGRMPGGFR*CRVCTG
Trigger: CCCCGTGCAGACTCGACAGCACCTGAACCCACCTGG...CATTCTGCCTGCTAGATCGGGGCCAGATGAGATGAAAGTCAACGCTTGAGAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562569.1
CDS-3UTR GCA 90 bp CCTCCCAAATGTAAACGACAGCCACACAGCAGGGCTTGCATGCGCAGGAACTCTAGGAGATGCTGGATTTaGCTCCCGGTGGGTTCAGGA +
Preference number: 4 (lower is better)
Translates to: PPKCKRQPHSRACMRRNSRRCWI*LPVGSG
Trigger: TCCTGAACCCACCGGGAGGCAAATCCAGCATCTCCT...AGAGTTCCTGCGCATGCAAGCCCTGCTGTGTGGCTGTCGTTTACATTTGGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
CDS-3UTR GCA 90 bp ATGGCTACCCTATCTCTTGAGTTTCTGGTCTGGCTCCGGGTGGAGCAGTGGCTTAGGAGATGCTGGATTTaGCTCCCGGTGGGTTCAGGA +
Preference number: 4 (lower is better)
Translates to: MATLSLEFLVWLRVEQWLRRCWI*LPVGSG
Trigger: TCCTGAACCCACCGGGAGGCAAATCCAGCATCTCCT...AAGCCACTGCTCCACCCGGAGCCAGACCAGAAACTCAAGAGATAGGGTAGCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
CDS-3UTR GCA 90 bp ATGGCTACCCTATCTCTTGAGTTTCTGGTCTGGCTCCGGGTGGAGCAGTGGCTTGTTGACAAAGCCTTGTaGAGACCCCAGTGTGCCAGG +
Preference number: 4 (lower is better)
Translates to: MATLSLEFLVWLRVEQWLVDKAL*RPQCAR
Trigger: CCTGGCACACTGGGGTCTGCACAAGGCTTTGTCAAC...AAGCCACTGCTCCACCCGGAGCCAGACCAGAAACTCAAGAGATAGGGTAGCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
CDS-3UTR GCA 90 bp CCCCATTTCATCCCCACAGAGGCATCTCCCAGCCATCTGGAAGGCACGGGTCTCCTGCCCAGGGGCTTCTaGTGTAGTTCATATTTTCCT +
Preference number: 4 (lower is better)
Translates to: PHFIPTEASPSHLEGTGLLPRGF*CSSYFP
Trigger: AGGAAAATATGAACTACAGCAGAAGCCCCTGGGCAG...GAGACCCGTGCCTTCCAGATGGCTGGGAGATGCCTCTGTGGGGATGAAATGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
CDS-3UTR CCA 90 bp CTTTCAGTCATTCCTAGACATCCAATCAGCTGGCGGGCTGTTGATCCAAGGACCCGGGGCCTGCTTTTCTaGCGCTGCCTTTCTCACCTG +
Preference number: 4 (lower is better)
Translates to: LSVIPRHPISWRAVDPRTRGLLF*RCLSHL
Trigger: CAGGTGAGAAAGGCAGCGCCAGAAAAGCAGGCCCCG...GGTCCTTGGATCAACAGCCCGCCAGCTGATTGGATGTCTAGGAATGACTGAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248098.8
ENST00000561516.5
ENST00000562684.5
CDS-3UTR CCA 90 bp GGTGTGACTTTGCTACTGAACTCCTTCATCTCCTGGCCTAAGGTCTCTAGTCTCTGGGCTCCTGCTCCTTaGCGGGGCCTGCTTTTCTGG +
Preference number: 4 (lower is better)
Translates to: GVTLLLNSFISWPKVSSLWAPAP*RGLLFW
Trigger: CCAGAAAAGCAGGCCCCGCCAAGGAGCAGGAGCCCA...GAGACTAGAGACCTTAGGCCAGGAGATGAAGGAGTTCAGTAGCAAAGTCACACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
CDS-3UTR CCA 90 bp GGCTCACATAAGACTAACCCTCTTCCCACCCCGCTCATTTGGGCAAAAGGAAATTGTCGACTGTGGGCATaGGCTCCTGCTCCTTGGCGG +
Preference number: 4 (lower is better)
Translates to: GSHKTNPLPTPLIWAKGNCRLWA*APAPWR
Trigger: CCGCCAAGGAGCAGGAGCCCATGCCCACAGTCGACA...ATTTCCTTTTGCCCAAATGAGCGGGGTGGGAAGAGGGTTAGTCTTATGTGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
CDS-3UTR CCA 90 bp CTTTCAGTCATTCCTAGACATCCAATCAGCTGGCGGGCTGTTGATCCAAGGACCCATGGCTGTCGACTGTaGGCATGGGCTCCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: LSVIPRHPISWRAVDPRTHGCRL*AWAPAP
Trigger: AGGAGCAGGAGCCCATGCCCACAGTCGACAGCCATG...GGTCCTTGGATCAACAGCCCGCCAGCTGATTGGATGTCTAGGAATGACTGAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248098.8
ENST00000561516.5
ENST00000562684.5
CDS-3UTR CCA 90 bp CCGAGGTTTCAGATGGCAGGAACTGGGCACTTCAGAGGGTCAGGGCACCAAAACAGTAGAAGGAGATGCTaGATTTGCCTCCCGGTGGGT +
Preference number: 4 (lower is better)
Translates to: PRFQMAGTGHFRGSGHQNSRRRC*ICLPVG
Trigger: ACCCACCGGGAGGCAAATCCAGCATCTCCTTCTACT...GTTTTGGTGCCCTGACCCTCTGAAGTGCCCAGTTCCTGCCATCTGAAACCTCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
CDS-3UTR CCA 90 bp TGCAAGGGCTGGGAGAATCACAGGGCCCAGTACCGTCACGTCCTATTTCTTCCTGGCCGAGGTTTCAGATaGCAGGAACTGGGCACTTCA +
Preference number: 4 (lower is better)
Translates to: CKGWENHRAQYRHVLFLPGRGFR*QELGTS
Trigger: TGAAGTGCCCAGTTCCTGCCATCTGAAACCTCGGCC...AGGAAGAAATAGGACGTGACGGTACTGGGCCCTGTGATTCTCCCAGCCCTTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
CDS-3UTR TCA 90 bp CTTCCAGTTCCTCTCAAACCTGGACTACACATGAGTGATGGCCAGGGGTGCCCCAGTCTGCACGGGGGTTaGTTCGTCAAAGATACCACT +
Preference number: 4 (lower is better)
Translates to: LPVPLKPGLHMSDGQGCPSLHGG*FVKDTT
Trigger: AGTGGTATCTTTGACGAATCAACCCCCGTGCAGACT...GGGGCACCCCTGGCCATCACTCATGTGTAGTCCAGGTTTGAGAGGAACTGGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000562684.5
CDS-3UTR TCA 90 bp ATCTGGCCCCGATCTAGCAGGCAGAATGGTGTGGAGCCTCCTAGAGAGGAACTCAGTCTGCACGGGGGTTaGTTCGTCAAAGATACCACT +
Preference number: 4 (lower is better)
Translates to: IWPRSSRQNGVEPPREELSLHGG*FVKDTT
Trigger: AGTGGTATCTTTGACGAATCAACCCCCGTGCAGACT...GAGTTCCTCTCTAGGAGGCTCCACACCATTCTGCCTGCTAGATCGGGGCCAGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562569.1
CDS-3UTR TCA 90 bp GCTACCCTATCTCTTGAGTTTCTGGTCTGGCTCCGGGTGGAGCAGTGGCTTCTCAGTCTGCACGGGGGTTaGTTCGTCAAAGATACCACT +
Preference number: 4 (lower is better)
Translates to: ATLSLEFLVWLRVEQWLLSLHGG*FVKDTT
Trigger: AGTGGTATCTTTGACGAATCAACCCCCGTGCAGACT...GAGAAGCCACTGCTCCACCCGGAGCCAGACCAGAAACTCAAGAGATAGGGTAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000562684.5
CDS-3UTR TCA 90 bp AAGCGTGAAGTGGCAGTGACCGGAGACCCAAAAATGTCGCTGGTCTTCCCTCCAAGCGTGAAGTGGCAGTaGCCGGAGACCCAAAAATGT +
Preference number: 4 (lower is better)
Translates to: KREVAVTGDPKMSLVFPPSVKWQ*PETQKC
Trigger: ACATTTTTGGGTCTCCGGTCACTGCCACTTCACGCT...TGGAGGGAAGACCAGCGACATTTTTGGGTCTCCGGTCACTGCCACTTCACGCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000566925.5
CDS-3UTR TCA 90 bp GGCTCACATAAGACTAACCCTCTTCCCACCCCGCTCATTTGGGCAAAAGGAAATTGGGTGTGCCAAGCGTaGAGTGGCAGTGACCGGAGA +
Preference number: 4 (lower is better)
Translates to: GSHKTNPLPTPLIWAKGNWVCQA*SGSDRR
Trigger: TCTCCGGTCACTGCCACTTCACGCTTGGCACACCCA...ATTTCCTTTTGCCCAAATGAGCGGGGTGGGAAGAGGGTTAGTCTTATGTGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000562684.5
CDS-3UTR TCA 90 bp CCTTCATCTCCTGGCCTAAGGTCTCTAGTCTCTTCTGGAAGCTTGTTTGTGAGTCAGCTGGCGGGCTGTTaGTCCAAGGACCATGCCCTG +
Preference number: 4 (lower is better)
Translates to: PSSPGLRSLVSSGSLFVSQLAGC*SKDHAL
Trigger: CAGGGCATGGTCCTTGGATCAACAGCCCGCCAGCTG...ACTCACAAACAAGCTTCCAGAAGAGACTAGAGACCTTAGGCCAGGAGATGAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
CDS-3UTR TCA 90 bp TGCAAGGGCTGGGAGAATCACAGGGCCCAGTACCGTCACGTCCTATTTCTTCCTAGGCAGATTCCAACATaGGATCAGATCAGGCCGAGG +
Preference number: 4 (lower is better)
Translates to: CKGWENHRAQYRHVLFLPRQIPT*DQIRPR
Trigger: CCTCGGCCTGATCTGATCTCATGTTGGAATCTGCCT...AGGAAGAAATAGGACGTGACGGTACTGGGCCCTGTGATTCTCCCAGCCCTTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
CDS-3UTR TCA 90 bp ATGGCTACCCTATCTCTTGAGTTTCTGGTCTGGCTCCGGGTGGAGCAGTGGCTTTGCCATCCCATTAGCTaGGTGAGCAAAGCTCAGGGA +
Preference number: 4 (lower is better)
Translates to: MATLSLEFLVWLRVEQWLCHPIS*VSKAQG
Trigger: TCCCTGAGCTTTGCTCACTCAGCTAATGGGATGGCA...AAGCCACTGCTCCACCCGGAGCCAGACCAGAAACTCAAGAGATAGGGTAGCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
CDS-3UTR TCA 90 bp GTCATTCCTAGACATCCAATCAGCTGGCGGGCTGTTGATCCAAGGACCATGCCCTGCCATCCCATTAGCTaGGTGAGCAAAGCTCAGGGA +
Preference number: 4 (lower is better)
Translates to: VIPRHPISWRAVDPRTMPCHPIS*VSKAQG
Trigger: TCCCTGAGCTTTGCTCACTCAGCTAATGGGATGGCA...GGGCATGGTCCTTGGATCAACAGCCCGCCAGCTGATTGGATGTCTAGGAATGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
CDS-3UTR TCA 90 bp CCTCCCAAATGTAAACGACAGCCACACAGCAGGGCTTGCATGCGCAGGAACTCTCAGCATGAGCCTGACTaGACATGGCTGCTGCTTTTC +
Preference number: 4 (lower is better)
Translates to: PPKCKRQPHSRACMRRNSQHEPD*TWLLLF
Trigger: GAAAAGCAGCAGCCATGTTCAGTCAGGCTCATGCTG...AGAGTTCCTGCGCATGCAAGCCCTGCTGTGTGGCTGTCGTTTACATTTGGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
CDS-3UTR TCA 90 bp CTTCCAGTTCCTCTCAAACCTGGACTACACATGAGTGATGGCCAGGGGTGCCCCGAAGCTGTCTTTGGTTaGCAAAGCCTTGTGCAGACC +
Preference number: 4 (lower is better)
Translates to: LPVPLKPGLHMSDGQGCPEAVFG*QSLVQT
Trigger: GGTCTGCACAAGGCTTTGTCAACCAAAGACAGCTTC...GGGGCACCCCTGGCCATCACTCATGTGTAGTCCAGGTTTGAGAGGAACTGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
CDS-3UTR TCA 90 bp GGTGCCCCATTTCATCCCCACAGAGGCATCTCCCAGCCATCTGGAAGGCACGGGTCACATAAGAAAACATaGTCCTGGGGGATTTGTCCT +
Preference number: 4 (lower is better)
Translates to: GAPFHPHRGISQPSGRHGSHKKT*SWGICP
Trigger: AGGACAAATCCCCCAGGATCATGTTTTCTTATGTGA...CCCGTGCCTTCCAGATGGCTGGGAGATGCCTCTGTGGGGATGAAATGGGGCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000561516.5
ENST00000569765.5
CDS-3UTR GCA 90 bp CCATTTCATCCCCACAGAGGCATCTCCCAGCCATCTGGAAGGCACGGGTCTCCAGACTTCCAAAAAGATTaGTCGATTCTCCTCCTGGGG +
Preference number: 4 (lower is better)
Translates to: PFHPHRGISQPSGRHGSPDFQKD*SILLLG
Trigger: CCCCAGGAGGAGAATCGAGCAATCTTTTTGGAAGTC...TGGAGACCCGTGCCTTCCAGATGGCTGGGAGATGCCTCTGTGGGGATGAAATGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
CDS-3UTR GCA 90 bp GGTTCAGGTGCTGTCGAGTCTGCACGGGGGTTGATTCGTCAAAGATACCACTTCAGGTGCTGTCGAGTCTaGACGGGGGTTGATTCGTCA +
Preference number: 4 (lower is better)
Translates to: GSGAVESARGLIRQRYHFRCCRV*TGVDSS
Trigger: TGACGAATCAACCCCCGTGCAGACTCGACAGCACCT...GAAGTGGTATCTTTGACGAATCAACCCCCGTGCAGACTCGACAGCACCTGAACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000566925.5
CDS-3UTR GCA 90 bp GGTTTGTTTGGGTGTGCCAAGCGTGAAGTGGCAGTGACCGGAGACCCAAAAATGCTGCTTTTCTGGCGCTaGCTTTCTCACCTGGCTCTG +
Preference number: 4 (lower is better)
Translates to: GLFGCAKREVAVTGDPKMLLFWR*LSHLAL
Trigger: CAGAGCCAGGTGAGAAAGGCAGCGCCAGAAAAGCAG...CATTTTTGGGTCTCCGGTCACTGCCACTTCACGCTTGGCACACCCAAACAAACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566925.5
CDS-3UTR GCA 90 bp GCTCACATAAGACTAACCCTCTTCCCACCCCGCTCATTTGGGCAAAAGGAAATGCTCCTTGGCGGGGCCTaGTTTTCTGGCGCTGCCTTT +
Preference number: 4 (lower is better)
Translates to: AHIRLTLFPPRSFGQKEMLLGGA*FSGAAF
Trigger: AAAGGCAGCGCCAGAAAAGCAGGCCCCGCCAAGGAG...CATTTCCTTTTGCCCAAATGAGCGGGGTGGGAAGAGGGTTAGTCTTATGTGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
CDS-3UTR GCA 90 bp GTTCCTCTCAAACCTGGACTACACATGAGTGATGGCCAGGGGTGCCCCATTTCAAGGAGATGCTGGATTTaGCTCCCGGTGGGTTCAGGA +
Preference number: 4 (lower is better)
Translates to: VPLKPGLHMSDGQGCPISRRCWI*LPVGSG
Trigger: TCCTGAACCCACCGGGAGGCAAATCCAGCATCTCCT...TGAAATGGGGCACCCCTGGCCATCACTCATGTGTAGTCCAGGTTTGAGAGGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
CDS-3UTR GCA 90 bp GCCCTGTGTGAAAGACAGGCAGATTCCAACATGAGATCAGATCAGGCCGAGGTTAGTGATGGCCAGGGGTaGCCCATTTCATCCCCACAG +
Preference number: 4 (lower is better)
Translates to: ALCERQADSNMRSDQAEVSDGQG*PISSPQ
Trigger: CTGTGGGGATGAAATGGGGCACCCCTGGCCATCACT...AACCTCGGCCTGATCTGATCTCATGTTGGAATCTGCCTGTCTTTCACACAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
CDS-3UTR GCA 90 bp CTTTCAGTCATTCCTAGACATCCAATCAGCTGGCGGGCTGTTGATCCAAGGACCAGTGATGGCCAGGGGTaGCCCATTTCATCCCCACAG +
Preference number: 4 (lower is better)
Translates to: LSVIPRHPISWRAVDPRTSDGQG*PISSPQ
Trigger: CTGTGGGGATGAAATGGGGCACCCCTGGCCATCACT...GGTCCTTGGATCAACAGCCCGCCAGCTGATTGGATGTCTAGGAATGACTGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248098.8
ENST00000561516.5
ENST00000562684.5
CDS-3UTR GCA 90 bp AAAACATGGCTACCCTATCTCTTGAGTTTCTGGTCTGGCTCCGGGTGGAGCAGTTCAGAGCAAAGCTGCTaGCGCCACCCAGACGTTCTC +
Preference number: 4 (lower is better)
Translates to: KTWLPYLLSFWSGSGWSSSEQSC*RHPDVL
Trigger: GAGAACGTCTGGGTGGCGGCAGCAGCTTTGCTCTGA...ACTGCTCCACCCGGAGCCAGACCAGAAACTCAAGAGATAGGGTAGCCATGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
CDS-3UTR GCA 90 bp CCGAGGTTTCAGATGGCAGGAACTGGGCACTTCAGAGGGTCAGGGCACCAAAACGCTTCTCCTCACCTATaGATTGCAAGCCAGGTCAGA +
Preference number: 4 (lower is better)
Translates to: PRFQMAGTGHFRGSGHQNASPHL*IASQVR
Trigger: TCTGACCTGGCTTGCAATGCATAGGTGAGGAGAAGC...GTTTTGGTGCCCTGACCCTCTGAAGTGCCCAGTTCCTGCCATCTGAAACCTCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000248098.8
CDS-3UTR GCA 90 bp AAAACATGGCTACCCTATCTCTTGAGTTTCTGGTCTGGCTCCGGGTGGAGCAGTGCTGGGGGAGGTGGATaGCAAACTTCCTGTCAGCAG +
Preference number: 4 (lower is better)
Translates to: KTWLPYLLSFWSGSGWSSAGGGG*QTSCQQ
Trigger: CTGCTGACAGGAAGTTTGGCATCCACCTCCCCCAGC...ACTGCTCCACCCGGAGCCAGACCAGAAACTCAAGAGATAGGGTAGCCATGTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382711.9
ENST00000562684.5
ENST00000569765.5
CDS-3UTR GCA 90 bp AAAACATGGCTACCCTATCTCTTGAGTTTCTGGTCTGGCTCCGGGTGGAGCAGTCTTCCTGTCAGCAGTTaGCATTTCCTGGAGCCGGCG +
Preference number: 4 (lower is better)
Translates to: KTWLPYLLSFWSGSGWSSLPVSS*HFLEPA
Trigger: CGCCGGCTCCAGGAAATGGCAACTGCTGACAGGAAG...ACTGCTCCACCCGGAGCCAGACCAGAAACTCAAGAGATAGGGTAGCCATGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562684.5
ENST00000569765.5
CDS-3UTR GCA 90 bp TCTCAAGCGTTGACTTTCATCTCATCTGGCCCCGATCTAGCAGGCAGAATGGTGCATAATGCCTGGCTCTaGTCCAGCCGGGATGCTCCT +
Preference number: 4 (lower is better)
Translates to: SQALTFISSGPDLAGRMVHNAWL*SSRDAP
Trigger: AGGAGCATCCCGGCTGGAGCAGAGCCAGGCATTATG...CACCATTCTGCCTGCTAGATCGGGGCCAGATGAGATGAAAGTCAACGCTTGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562569.1
CDS-3UTR CCA 90 bp CCTTCATCTCCTGGCCTAAGGTCTCTAGTCTCTTCTGGAAGCTTGTTTGTGAGTTCGCTATCCGGGACCTaGAACATGTCGACCGCCGCC +
Preference number: 4 (lower is better)
Translates to: PSSPGLRSLVSSGSLFVSSLSGT*NMSTAA
Trigger: GGCGGCGGTCGACATGTTCCAGGTCCCGGATAGCGA...ACTCACAAACAAGCTTCCAGAAGAGACTAGAGACCTTAGGCCAGGAGATGAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
CDS-3UTR CCA 90 bp GTGCCCCATTTCATCCCCACAGAGGCATCTCCCAGCCATCTGGAAGGCACGGGTGGGGATTTGTCCTCTTaGGTATGTTCTGAGGTTCTT +
Preference number: 4 (lower is better)
Translates to: VPHFIPTEASPSHLEGTGGDLSS*VCSEVL
Trigger: AAGAACCTCAGAACATACCCAAGAGGACAAATCCCC...ACCCGTGCCTTCCAGATGGCTGGGAGATGCCTCTGTGGGGATGAAATGGGGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
CDS-3UTR CCA 90 bp CCCATTTCATCCCCACAGAGGCATCTCCCAGCCATCTGGAAGGCACGGGTCTCCGGGGATTTGTCCTCTTaGGTATGTTCTGAGGTTCTT +
Preference number: 4 (lower is better)
Translates to: PISSPQRHLPAIWKARVSGDLSS*VCSEVL
Trigger: AAGAACCTCAGAACATACCCAAGAGGACAAATCCCC...GGAGACCCGTGCCTTCCAGATGGCTGGGAGATGCCTCTGTGGGGATGAAATGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
CDS-3UTR CCA 90 bp TTCATCTCATCTGGCCCCGATCTAGCAGGCAGAATGGTGTGGAGCCTCCTAGAGACCCAAAAATGTCGCTaGTCTTCCCTCCAGGTGGGT +
Preference number: 4 (lower is better)
Translates to: FISSGPDLAGRMVWSLLETQKCR*SSLQVG
Trigger: ACCCACCTGGAGGGAAGACCAGCGACATTTTTGGGT...CTCTAGGAGGCTCCACACCATTCTGCCTGCTAGATCGGGGCCAGATGAGATGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562569.1
CDS-3UTR CCA 90 bp ATCCAATCAGCTGGCGGGCTGTTGATCCAAGGACCATGCCCTGCCCCACCTCCCAGAAAACATGATCCTTaGGTTTGTTTGGGTGTGCCA +
Preference number: 4 (lower is better)
Translates to: IQSAGGLLIQGPCPAPPPRKHDP*VCLGVP
Trigger: TGGCACACCCAAACAAACCCAAGGATCATGTTTTCT...GGGAGGTGGGGCAGGGCATGGTCCTTGGATCAACAGCCCGCCAGCTGATTGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
CDS-3UTR CCA 90 bp GGTGTGACTTTGCTACTGAACTCCTTCATCTCCTGGCCTAAGGTCTCTAGTCTCCGGGGCCTGCTTTTCTaGCGCTGCCTTTCTCACCTG +
Preference number: 4 (lower is better)
Translates to: GVTLLLNSFISWPKVSSLRGLLF*RCLSHL
Trigger: CAGGTGAGAAAGGCAGCGCCAGAAAAGCAGGCCCCG...GAGACTAGAGACCTTAGGCCAGGAGATGAAGGAGTTCAGTAGCAAAGTCACACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
CDS-3UTR CCA 90 bp GCTCACATAAGACTAACCCTCTTCCCACCCCGCTCATTTGGGCAAAAGGAAATGCGGGGCCTGCTTTTCTaGCGCTGCCTTTCTCACCTG +
Preference number: 4 (lower is better)
Translates to: AHIRLTLFPPRSFGQKEMRGLLF*RCLSHL
Trigger: CAGGTGAGAAAGGCAGCGCCAGAAAAGCAGGCCCCG...CATTTCCTTTTGCCCAAATGAGCGGGGTGGGAAGAGGGTTAGTCTTATGTGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
CDS-3UTR CCA 90 bp GGGTTGATTCGTCAAAGATACCACTTCCTTTACCCCCTGGGGGATTTGTCCTCTCGGGGCCTGCTTTTCTaGCGCTGCCTTTCTCACCTG +
Preference number: 4 (lower is better)
Translates to: GLIRQRYHFLYPLGDLSSRGLLF*RCLSHL
Trigger: CAGGTGAGAAAGGCAGCGCCAGAAAAGCAGGCCCCG...AGAGGACAAATCCCCCAGGGGGTAAAGGAAGTGGTATCTTTGACGAATCAACCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000566925.5
CDS-3UTR CCA 90 bp GGCTCACATAAGACTAACCCTCTTCCCACCCCGCTCATTTGGGCAAAAGGAAATCATGGCTGTCGACTGTaGGCATGGGCTCCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: GSHKTNPLPTPLIWAKGNHGCRL*AWAPAP
Trigger: AGGAGCAGGAGCCCATGCCCACAGTCGACAGCCATG...ATTTCCTTTTGCCCAAATGAGCGGGGTGGGAAGAGGGTTAGTCTTATGTGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
CDS-3UTR CCA 90 bp CCTCCCAAATGTAAACGACAGCCACACAGCAGGGCTTGCATGCGCAGGAACTCTAGTAGAAGGAGATGCTaGATTTGCCTCCCGGTGGGT +
Preference number: 4 (lower is better)
Translates to: PPKCKRQPHSRACMRRNSSRRRC*ICLPVG
Trigger: ACCCACCGGGAGGCAAATCCAGCATCTCCTTCTACT...AGAGTTCCTGCGCATGCAAGCCCTGCTGTGTGGCTGTCGTTTACATTTGGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
CDS-3UTR CCA 90 bp GCTCCGGGTGGAGCAGTGGCTTCTCTTAGTAGAAGGAGATGCTGGATTTGCCTCAGTAGAAGGAGATGCTaGATTTGCCTCCCGGTGGGT +
Preference number: 4 (lower is better)
Translates to: APGGAVASLSRRRCWICLSRRRC*ICLPVG
Trigger: ACCCACCGGGAGGCAAATCCAGCATCTCCTTCTACT...GAGGCAAATCCAGCATCTCCTTCTACTAAGAGAAGCCACTGCTCCACCCGGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561516.5
ENST00000569765.5
CDS-3UTR CCA 90 bp TGCAAGGGCTGGGAGAATCACAGGGCCCAGTACCGTCACGTCCTATTTCTTCCTCTCCGGGTGGAGCAGTaGCTTCTCTTAGTAGAAGGA +
Preference number: 4 (lower is better)
Translates to: CKGWENHRAQYRHVLFLPLRVEQ*LLLVEG
Trigger: TCCTTCTACTAAGAGAAGCCACTGCTCCACCCGGAG...AGGAAGAAATAGGACGTGACGGTACTGGGCCCTGTGATTCTCCCAGCCCTTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
CDS-3UTR CCA 90 bp ATGGCTACCCTATCTCTTGAGTTTCTGGTCTGGCTCCGGGTGGAGCAGTGGCTTTATCTCTTGAGTTTCTaGTCTGGCTCCGGGTGGAGC +
Preference number: 4 (lower is better)
Translates to: MATLSLEFLVWLRVEQWLYLLSF*SGSGWS
Trigger: GCTCCACCCGGAGCCAGACCAGAAACTCAAGAGATA...AAGCCACTGCTCCACCCGGAGCCAGACCAGAAACTCAAGAGATAGGGTAGCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
CDS-3UTR CCA 90 bp CTTTCAGTCATTCCTAGACATCCAATCAGCTGGCGGGCTGTTGATCCAAGGACCCATCTCCCAGCCATCTaGAAGGCACGGGTCTCCAAG +
Preference number: 4 (lower is better)
Translates to: LSVIPRHPISWRAVDPRTHLPAI*KARVSK
Trigger: CTTGGAGACCCGTGCCTTCCAGATGGCTGGGAGATG...GGTCCTTGGATCAACAGCCCGCCAGCTGATTGGATGTCTAGGAATGACTGAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248098.8
ENST00000561516.5
ENST00000562684.5
CDS-3UTR CCA 90 bp ATGGCTACCCTATCTCTTGAGTTTCTGGTCTGGCTCCGGGTGGAGCAGTGGCTTAGACATCCAATCAGCTaGCGGGCTGTTGATCCAAGG +
Preference number: 4 (lower is better)
Translates to: MATLSLEFLVWLRVEQWLRHPIS*RAVDPR
Trigger: CCTTGGATCAACAGCCCGCCAGCTGATTGGATGTCT...AAGCCACTGCTCCACCCGGAGCCAGACCAGAAACTCAAGAGATAGGGTAGCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248098.8
ENST00000561516.5
ENST00000562684.5
CDS-3UTR CCA 90 bp TTCATCCCCACAGAGGCATCTCCCAGCCATCTGGAAGGCACGGGTCTCCAAGCAAACTCCTTCATCTCCTaGCCTAAGGTCTCTAGTCTC +
Preference number: 4 (lower is better)
Translates to: FIPTEASPSHLEGTGLQANSFIS*PKVSSL
Trigger: GAGACTAGAGACCTTAGGCCAGGAGATGAAGGAGTT...TGCTTGGAGACCCGTGCCTTCCAGATGGCTGGGAGATGCCTCTGTGGGGATGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
CDS-3UTR CCA 90 bp AAGCACAAACCACCTGAAGTGTGTGTAGAGTCACACAGAGTGTTTCTTGGCTCCGCGGACTGCAAGGGCTaGGAGAATCACAGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: KHKPPEVCVESHRVFLGSADCKG*ENHRAQ
Trigger: CTGGGCCCTGTGATTCTCCCAGCCCTTGCAGTCCGC...GGAGCCAAGAAACACTCTGTGTGACTCTACACACACTTCAGGTGGTTTGTGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
CDS-3UTR CCA 90 bp TTCATCTCATCTGGCCCCGATCTAGCAGGCAGAATGGTGTGGAGCCTCCTAGAGAATCCACATAATGCCTaGCTCTGCTCCAGCCGGGAT +
Preference number: 4 (lower is better)
Translates to: FISSGPDLAGRMVWSLLENPHNA*LCSSRD
Trigger: ATCCCGGCTGGAGCAGAGCCAGGCATTATGTGGATT...CTCTAGGAGGCTCCACACCATTCTGCCTGCTAGATCGGGGCCAGATGAGATGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562569.1
CDS-3UTR CCA 90 bp GGTTCAGGTGCTGTCGAGTCTGCACGGGGGTTGATTCGTCAAAGATACCACTTCAAACCAAGCGTGTGCTaGCCGACCTCTGAAGTGGTG +
Preference number: 4 (lower is better)
Translates to: GSGAVESARGLIRQRYHFKPSVC*PTSEVV
Trigger: CACCACTTCAGAGGTCGGCCAGCACACGCTTGGTTT...GAAGTGGTATCTTTGACGAATCAACCCCCGTGCAGACTCGACAGCACCTGAACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566925.5
CDS-3UTR CCA 90 bp TTGATTCGTCAAAGATACCACTTCCTTTACCCCCTGGGGGATTTGTCCTCTTGGGCTCGATTCTCCTCCTaGGGGCTTCATGGCCCCCAG +
Preference number: 4 (lower is better)
Translates to: LIRQRYHFLYPLGDLSSWARFSS*GLHGPQ
Trigger: CTGGGGGCCATGAAGCCCCCAGGAGGAGAATCGAGC...CCAAGAGGACAAATCCCCCAGGGGGTAAAGGAAGTGGTATCTTTGACGAATCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000566925.5
CDS-3UTR TCA 90 bp GCTACCCTATCTCTTGAGTTTCTGGTCTGGCTCCGGGTGGAGCAGTGGCTTCTCCTCTTGGGTATGTTCTaGGGTTCTTCTGTTGGTCCA +
Preference number: 4 (lower is better)
Translates to: ATLSLEFLVWLRVEQWLLLLGMF*GSSVGP
Trigger: TGGACCAACAGAAGAACCTCAGAACATACCCAAGAG...GAGAAGCCACTGCTCCACCCGGAGCCAGACCAGAAACTCAAGAGATAGGGTAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
CDS-3UTR TCA 90 bp TCATCTGGCCCCGATCTAGCAGGCAGAATGGTGTGGAGCCTCCTAGAGAGGAACCTCTTGGGTATGTTCTaGGGTTCTTCTGTTGGTCCA +
Preference number: 4 (lower is better)
Translates to: SSGPDLAGRMVWSLLERNLLGMF*GSSVGP
Trigger: TGGACCAACAGAAGAACCTCAGAACATACCCAAGAG...GTTCCTCTCTAGGAGGCTCCACACCATTCTGCCTGCTAGATCGGGGCCAGATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562569.1
CDS-3UTR TCA 90 bp CCTCCCAAATGTAAACGACAGCCACACAGCAGGGCTTGCATGCGCAGGAACTCTAGTCTGCACGGGGGTTaGTTCGTCAAAGATACCACT +
Preference number: 4 (lower is better)
Translates to: PPKCKRQPHSRACMRRNSSLHGG*FVKDTT
Trigger: AGTGGTATCTTTGACGAATCAACCCCCGTGCAGACT...AGAGTTCCTGCGCATGCAAGCCCTGCTGTGTGGCTGTCGTTTACATTTGGGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
CDS-3UTR TCA 90 bp ACTTTCATCTCATCTGGCCCCGATCTAGCAGGCAGAATGGTGTGGAGCCTCCTAAGCGTGAAGTGGCAGTaGCCGGAGACCCAAAAATGT +
Preference number: 4 (lower is better)
Translates to: TFISSGPDLAGRMVWSLLSVKWQ*PETQKC
Trigger: ACATTTTTGGGTCTCCGGTCACTGCCACTTCACGCT...TAGGAGGCTCCACACCATTCTGCCTGCTAGATCGGGGCCAGATGAGATGAAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562569.1
CDS-3UTR TCA 90 bp GCTCACATAAGACTAACCCTCTTCCCACCCCGCTCATTTGGGCAAAAGGAAATGTGGACTACACATGAGTaGTGGCCAGGGGTGCCCCAT +
Preference number: 4 (lower is better)
Translates to: AHIRLTLFPPRSFGQKEMWTTHE*WPGVPH
Trigger: ATGGGGCACCCCTGGCCATCACTCATGTGTAGTCCA...CATTTCCTTTTGCCCAAATGAGCGGGGTGGGAAGAGGGTTAGTCTTATGTGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
CDS-3UTR TCA 90 bp GGCTCACATAAGACTAACCCTCTTCCCACCCCGCTCATTTGGGCAAAAGGAAATAACCTGGACTACACATaGGTGATGGCCAGGGGTGCC +
Preference number: 4 (lower is better)
Translates to: GSHKTNPLPTPLIWAKGNNLDYT*VMARGA
Trigger: GGCACCCCTGGCCATCACTCATGTGTAGTCCAGGTT...ATTTCCTTTTGCCCAAATGAGCGGGGTGGGAAGAGGGTTAGTCTTATGTGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
CDS-3UTR TCA 90 bp CCGAGGTTTCAGATGGCAGGAACTGGGCACTTCAGAGGGTCAGGGCACCAAAACATGCAGCTTAGAGGGTaGGAACAGGATGCTAGGTTT +
Preference number: 4 (lower is better)
Translates to: PRFQMAGTGHFRGSGHQNMQLRG*EQDARF
Trigger: AAACCTAGCATCCTGTTCTCACCCTCTAAGCTGCAT...GTTTTGGTGCCCTGACCCTCTGAAGTGCCCAGTTCCTGCCATCTGAAACCTCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
CDS-3UTR TCA 90 bp GCTACCCTATCTCTTGAGTTTCTGGTCTGGCTCCGGGTGGAGCAGTGGCTTCTCGCCCACCTGTTTTCTTaGCAGGACTTGCATATGACA +
Preference number: 4 (lower is better)
Translates to: ATLSLEFLVWLRVEQWLLAHLFS*QDLHMT
Trigger: TGTCATATGCAAGTCCTGTCAAGAAAACAGGTGGGC...GAGAAGCCACTGCTCCACCCGGAGCCAGACCAGAAACTCAAGAGATAGGGTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000248098.8
CDS-3UTR GCA 90 bp AAAACATGGCTACCCTATCTCTTGAGTTTCTGGTCTGGCTCCGGGTGGAGCAGTAGGTGCTGTCGAGTCTaGACGGGGGTTGATTCGTCA +
Preference number: 4 (lower is better)
Translates to: KTWLPYLLSFWSGSGWSSRCCRV*TGVDSS
Trigger: TGACGAATCAACCCCCGTGCAGACTCGACAGCACCT...ACTGCTCCACCCGGAGCCAGACCAGAAACTCAAGAGATAGGGTAGCCATGTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000562684.5
CDS-3UTR GCA 90 bp GGCTCACATAAGACTAACCCTCTTCCCACCCCGCTCATTTGGGCAAAAGGAAATAGTGATGGCCAGGGGTaGCCCATTTCATCCCCACAG +
Preference number: 4 (lower is better)
Translates to: GSHKTNPLPTPLIWAKGNSDGQG*PISSPQ
Trigger: CTGTGGGGATGAAATGGGGCACCCCTGGCCATCACT...ATTTCCTTTTGCCCAAATGAGCGGGGTGGGAAGAGGGTTAGTCTTATGTGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
CDS-3UTR GCA 90 bp GCTCACATAAGACTAACCCTCTTCCCACCCCGCTCATTTGGGCAAAAGGAAATGTCAGAGCAAAGCTGCTaGCGCCACCCAGACGTTCTC +
Preference number: 4 (lower is better)
Translates to: AHIRLTLFPPRSFGQKEMSEQSC*RHPDVL
Trigger: GAGAACGTCTGGGTGGCGGCAGCAGCTTTGCTCTGA...CATTTCCTTTTGCCCAAATGAGCGGGGTGGGAAGAGGGTTAGTCTTATGTGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
CDS-3UTR GCA 90 bp AAAACATGGCTACCCTATCTCTTGAGTTTCTGGTCTGGCTCCGGGTGGAGCAGTCCACACAGCAGGGCTTaGATGCGCAGGAACTCTTCT +
Preference number: 4 (lower is better)
Translates to: KTWLPYLLSFWSGSGWSSPHSRA*MRRNSS
Trigger: AGAAGAGTTCCTGCGCATGCAAGCCCTGCTGTGTGG...ACTGCTCCACCCGGAGCCAGACCAGAAACTCAAGAGATAGGGTAGCCATGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
CDS-3UTR GCA 90 bp GGCTCACATAAGACTAACCCTCTTCCCACCCCGCTCATTTGGGCAAAAGGAAATGCTGGGGGAGGTGGATaGCAAACTTCCTGTCAGCAG +
Preference number: 4 (lower is better)
Translates to: GSHKTNPLPTPLIWAKGNAGGGG*QTSCQQ
Trigger: CTGCTGACAGGAAGTTTGGCATCCACCTCCCCCAGC...ATTTCCTTTTGCCCAAATGAGCGGGGTGGGAAGAGGGTTAGTCTTATGTGAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000382711.9
ENST00000562684.5
ENST00000569765.5
CDS-3UTR CCA 90 bp GGTGCCCCATTTCATCCCCACAGAGGCATCTCCCAGCCATCTGGAAGGCACGGGAGGAGTAGCTTCTTCTaGACTTCCAAAAAGATTGCT +
Preference number: 4 (lower is better)
Translates to: GAPFHPHRGISQPSGRHGRSSFF*TSKKIA
Trigger: AGCAATCTTTTTGGAAGTCCAGAAGAAGCTACTCCT...CCCGTGCCTTCCAGATGGCTGGGAGATGCCTCTGTGGGGATGAAATGGGGCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
CDS-3UTR CCA 90 bp GGGTGCCCCATTTCATCCCCACAGAGGCATCTCCCAGCCATCTGGAAGGCACGGAGGAGTAGCTTCTTCTaGACTTCCAAAAAGATTGCT +
Preference number: 4 (lower is better)
Translates to: GCPISSPQRHLPAIWKARRSSFF*TSKKIA
Trigger: AGCAATCTTTTTGGAAGTCCAGAAGAAGCTACTCCT...CCGTGCCTTCCAGATGGCTGGGAGATGCCTCTGTGGGGATGAAATGGGGCACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
CDS-3UTR CCA 90 bp CCATTTCATCCCCACAGAGGCATCTCCCAGCCATCTGGAAGGCACGGGTCTCCAGGGGATTTGTCCTCTTaGGTATGTTCTGAGGTTCTT +
Preference number: 4 (lower is better)
Translates to: PFHPHRGISQPSGRHGSPGDLSS*VCSEVL
Trigger: AAGAACCTCAGAACATACCCAAGAGGACAAATCCCC...TGGAGACCCGTGCCTTCCAGATGGCTGGGAGATGCCTCTGTGGGGATGAAATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
CDS-3UTR CCA 90 bp TTGACTTTCATCTCATCTGGCCCCGATCTAGCAGGCAGAATGGTGTGGAGCCTCACTTCCTTTACCCCCTaGGGGATTTGTCCTCTTGGG +
Preference number: 4 (lower is better)
Translates to: LTFISSGPDLAGRMVWSLTSFTP*GICPLG
Trigger: CCCAAGAGGACAAATCCCCCAGGGGGTAAAGGAAGT...GAGGCTCCACACCATTCTGCCTGCTAGATCGGGGCCAGATGAGATGAAAGTCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000562569.1
CDS-3UTR CCA 90 bp GGTTCAGGTGCTGTCGAGTCTGCACGGGGGTTGATTCGTCAAAGATACCACTTCACTTCCTTTACCCCCTaGGGGATTTGTCCTCTTGGG +
Preference number: 4 (lower is better)
Translates to: GSGAVESARGLIRQRYHFTSFTP*GICPLG
Trigger: CCCAAGAGGACAAATCCCCCAGGGGGTAAAGGAAGT...GAAGTGGTATCTTTGACGAATCAACCCCCGTGCAGACTCGACAGCACCTGAACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000566925.5
CDS-3UTR CCA 90 bp CTTTCTCAAGCGTTGACTTTCATCTCATCTGGCCCCGATCTAGCAGGCAGAATGGGTCTTCCCTCCAGGTaGGTTCAGGTGCTGTCGAGT +
Preference number: 4 (lower is better)
Translates to: LSQALTFISSGPDLAGRMGLPSR*VQVLSS
Trigger: ACTCGACAGCACCTGAACCCACCTGGAGGGAAGACC...CATTCTGCCTGCTAGATCGGGGCCAGATGAGATGAAAGTCAACGCTTGAGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562569.1
CDS-3UTR CCA 90 bp ACCCTATCTCTTGAGTTTCTGGTCTGGCTCCGGGTGGAGCAGTGGCTTCTCTTACTCCGGGTGGAGCAGTaGCTTCTCTTAGTAGAAGGA +
Preference number: 4 (lower is better)
Translates to: TLSLEFLVWLRVEQWLLLLRVEQ*LLLVEG
Trigger: TCCTTCTACTAAGAGAAGCCACTGCTCCACCCGGAG...TAAGAGAAGCCACTGCTCCACCCGGAGCCAGACCAGAAACTCAAGAGATAGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561516.5
ENST00000569765.5
CDS-3UTR CCA 90 bp GCTCACATAAGACTAACCCTCTTCCCACCCCGCTCATTTGGGCAAAAGGAAATGCTTGAGTTTCTGGTCTaGCTCCGGGTGGAGCAGTGG +
Preference number: 4 (lower is better)
Translates to: AHIRLTLFPPRSFGQKEMLEFLV*LRVEQW
Trigger: CCACTGCTCCACCCGGAGCCAGACCAGAAACTCAAG...CATTTCCTTTTGCCCAAATGAGCGGGGTGGGAAGAGGGTTAGTCTTATGTGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
CDS-3UTR CCA 90 bp CCCCATTTCATCCCCACAGAGGCATCTCCCAGCCATCTGGAAGGCACGGGTCTCGTGGACAGGCTGTTTTaGTTTCTTTCAGTCATTCCT +
Preference number: 4 (lower is better)
Translates to: PHFIPTEASPSHLEGTGLVDRLF*FLSVIP
Trigger: AGGAATGACTGAAAGAAACCAAAACAGCCTGTCCAC...GAGACCCGTGCCTTCCAGATGGCTGGGAGATGCCTCTGTGGGGATGAAATGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000248098.8
ENST00000561516.5
ENST00000562684.5
CDS-3UTR CCA 90 bp GGTGCCCCATTTCATCCCCACAGAGGCATCTCCCAGCCATCTGGAAGGCACGGGGTCTCTAGTCTCTTCTaGAAGCTTGTTTGTGAGTTA +
Preference number: 4 (lower is better)
Translates to: GAPFHPHRGISQPSGRHGVSSLF*KLVCEL
Trigger: TAACTCACAAACAAGCTTCCAGAAGAGACTAGAGAC...CCCGTGCCTTCCAGATGGCTGGGAGATGCCTCTGTGGGGATGAAATGGGGCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
CDS-3UTR CCA 90 bp CCCCTTCCAGTTCCTCTCAAACCTGGACTACACATGAGTGATGGCCAGGGGTGCAACTCCTTCATCTCCTaGCCTAAGGTCTCTAGTCTC +
Preference number: 4 (lower is better)
Translates to: PLPVPLKPGLHMSDGQGCNSFIS*PKVSSL
Trigger: GAGACTAGAGACCTTAGGCCAGGAGATGAAGGAGTT...GCACCCCTGGCCATCACTCATGTGTAGTCCAGGTTTGAGAGGAACTGGAAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
CDS-3UTR CCA 90 bp ATGCTGGATTTAGCAGCCGTGATCTCCAGAATGGAAGCGGTTCTGCTAAGAGGTGTGATCCTCCCACCCTaGCCTCCCAAAGACCCAAAG +
Preference number: 4 (lower is better)
Translates to: MLDLAAVISRMEAVLLRGVILPP*PPKDPK
Trigger: CTTTGGGTCTTTGGGAGGCCAGGGTGGGAGGATCAC...ACCTCTTAGCAGAACCGCTTCCATTCTGGAGATCACGGCTGCTAAATCCAGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000248098.8
CDS-3UTR CCA 90 bp ATTTTTAAAGTCCCGCAGAGGTCAGCGGGCCTCATTTATGGGAAGAACTGTGACGCTCGATTCTCCTCCTaGGGGCTTCATGGCCCTCTG +
Preference number: 4 (lower is better)
Translates to: IFKVPQRSAGLIYGKNCDARFSS*GLHGPL
Trigger: CAGAGGGCCATGAAGCCCCCAGGAGGAGAATCGAGC...GTCACAGTTCTTCCCATAAATGAGGCCCGCTGACCTCTGCGGGACTTTAAAAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562684.5
3UTR CAA 72 bp GGGCAAAAGGAAATGAAAACATGGCTACCCTATCTCTaGAGTTTCTGGTCTGGCTCCGGGTGGAGCAGTGGC +
Preference number: 4 (lower is better)
Translates to: GQKEMKTWLPYL*SFWSGSGWSSG
Trigger: GCCACTGCTCCACCCGGAGCCAGACCAGAAACTCAAGAGATAGGGTAGCCATGTTTTCATTTCCTTTTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
CDS-3UTR TCA 90 bp GTCATTCCTAGACATCCAATCAGCTGGCGGGCTGTTGATCCAAGGACCATGCCCCTCTTGGGTATGTTCTaGGGTTCTTCTGTTGGTCCA +
Preference number: 4 (lower is better)
Translates to: VIPRHPISWRAVDPRTMPLLGMF*GSSVGP
Trigger: TGGACCAACAGAAGAACCTCAGAACATACCCAAGAG...GGGCATGGTCCTTGGATCAACAGCCCGCCAGCTGATTGGATGTCTAGGAATGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248098.8
ENST00000561516.5
ENST00000562684.5
CDS-3UTR TCA 90 bp GGTTCAGGTGCTGTCGAGTCTGCACGGGGGTTGATTCGTCAAAGATACCACTTCAGTCTGCACGGGGGTTaGTTCGTCAAAGATACCACT +
Preference number: 4 (lower is better)
Translates to: GSGAVESARGLIRQRYHFSLHGG*FVKDTT
Trigger: AGTGGTATCTTTGACGAATCAACCCCCGTGCAGACT...GAAGTGGTATCTTTGACGAATCAACCCCCGTGCAGACTCGACAGCACCTGAACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000566925.5
CDS-3UTR TCA 90 bp GCCCTGTGTGAAAGACAGGCAGATTCCAACATGAGATCAGATCAGGCCGAGGTTAGCGTGAAGTGGCAGTaGCCGGAGACCCAAAAATGT +
Preference number: 4 (lower is better)
Translates to: ALCERQADSNMRSDQAEVSVKWQ*PETQKC
Trigger: ACATTTTTGGGTCTCCGGTCACTGCCACTTCACGCT...AACCTCGGCCTGATCTGATCTCATGTTGGAATCTGCCTGTCTTTCACACAGGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
CDS-3UTR TCA 90 bp CACATAAGACTAACCCTCTTCCCACCCCGCTCATTTGGGCAAAAGGAAATGAAATGGGTGTGCCAAGCGTaGAGTGGCAGTGACCGGAGA +
Preference number: 4 (lower is better)
Translates to: HIRLTLFPPRSFGQKEMKWVCQA*SGSDRR
Trigger: TCTCCGGTCACTGCCACTTCACGCTTGGCACACCCA...TTTCATTTCCTTTTGCCCAAATGAGCGGGGTGGGAAGAGGGTTAGTCTTATGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000562684.5
CDS-3UTR TCA 90 bp CACATAAGACTAACCCTCTTCCCACCCCGCTCATTTGGGCAAAAGGAAATGAAATCCAAGCAGCTGTCATaGCGGCCAGGAGACGCTGAG +
Preference number: 4 (lower is better)
Translates to: HIRLTLFPPRSFGQKEMKSKQLS*RPGDAE
Trigger: CTCAGCGTCTCCTGGCCGTCATGACAGCTGCTTGGA...TTTCATTTCCTTTTGCCCAAATGAGCGGGGTGGGAAGAGGGTTAGTCTTATGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
CDS-3UTR TCA 90 bp CTACAGGCAATCAAAAGGGGGAAGCTGTCTTTGGTTGACAAAGCCTTGTGCAGATGGACTACACATGAGTaGTGGCCAGGGGTGCCCCAT +
Preference number: 4 (lower is better)
Translates to: LQAIKRGKLSLVDKALCRWTTHE*WPGVPH
Trigger: ATGGGGCACCCCTGGCCATCACTCATGTGTAGTCCA...TCTGCACAAGGCTTTGTCAACCAAAGACAGCTTCCCCCTTTTGATTGCCTGTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
CDS-3UTR TCA 90 bp CTTTCAGTCATTCCTAGACATCCAATCAGCTGGCGGGCTGTTGATCCAAGGACCAGGGACACACACAACTaGCAGGCAAAAGCTCTGAGC +
Preference number: 4 (lower is better)
Translates to: LSVIPRHPISWRAVDPRTRDTHN*QAKALS
Trigger: GCTCAGAGCTTTTGCCTGTCAGTTGTGTGTGTCCCT...GGTCCTTGGATCAACAGCCCGCCAGCTGATTGGATGTCTAGGAATGACTGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
CDS-3UTR TCA 90 bp GCGTTGACTTTCATCTCATCTGGCCCCGATCTAGCAGGCAGAATGGTGTGGAGCCTGAGAAGTTTACCCTaGATCCACATAATGCCTGGC +
Preference number: 4 (lower is better)
Translates to: ALTFISSGPDLAGRMVWSLRSLP*IHIMPG
Trigger: GCCAGGCATTATGTGGATTCAGGGTAAACTTCTCAG...GCTCCACACCATTCTGCCTGCTAGATCGGGGCCAGATGAGATGAAAGTCAACGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562569.1
CDS-3UTR GCA 90 bp GTCATTCCTAGACATCCAATCAGCTGGCGGGCTGTTGATCCAAGGACCATGCCCGACTTCCAAAAAGATTaGTCGATTCTCCTCCTGGGG +
Preference number: 4 (lower is better)
Translates to: VIPRHPISWRAVDPRTMPDFQKD*SILLLG
Trigger: CCCCAGGAGGAGAATCGAGCAATCTTTTTGGAAGTC...GGGCATGGTCCTTGGATCAACAGCCCGCCAGCTGATTGGATGTCTAGGAATGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000248098.8
ENST00000561516.5
ENST00000562684.5
CDS-3UTR GCA 90 bp GGTGCCCCATTTCATCCCCACAGAGGCATCTCCCAGCCATCTGGAAGGCACGGGTCCAAAAATATTAGATaGCATCCTATTAGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: GAPFHPHRGISQPSGRHGSKNIR*HPIRPA
Trigger: AGCAGGCCTAATAGGATGGCATCTAATATTTTTGGA...CCCGTGCCTTCCAGATGGCTGGGAGATGCCTCTGTGGGGATGAAATGGGGCACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
CDS-3UTR GCA 90 bp TTGATTCGTCAAAGATACCACTTCCTTTACCCCCTGGGGGATTTGTCCTCTTGGTTTCTCACCTGGCTCTaGTCCAGCCGGGATGCTCCT +
Preference number: 4 (lower is better)
Translates to: LIRQRYHFLYPLGDLSSWFLTWL*SSRDAP
Trigger: AGGAGCATCCCGGCTGGAGCAGAGCCAGGTGAGAAA...CCAAGAGGACAAATCCCCCAGGGGGTAAAGGAAGTGGTATCTTTGACGAATCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000566925.5
CDS-3UTR GCA 90 bp TTGATTCGTCAAAGATACCACTTCCTTTACCCCCTGGGGGATTTGTCCTCTTGGGCTGGGGGAGGTGGATaGCAAACTTCCTGTCAGCAG +
Preference number: 4 (lower is better)
Translates to: LIRQRYHFLYPLGDLSSWAGGGG*QTSCQQ
Trigger: CTGCTGACAGGAAGTTTGGCATCCACCTCCCCCAGC...CCAAGAGGACAAATCCCCCAGGGGGTAAAGGAAGTGGTATCTTTGACGAATCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000566925.5
CDS-3UTR GCA 90 bp AAGCACAAACCACCTGAAGTGTGTGTAGAGTCACACAGAGTGTTTCTTGGCTCCCTTCCTGTCAGCAGTTaGCATTTCCTGGAGCCGGCG +
Preference number: 4 (lower is better)
Translates to: KHKPPEVCVESHRVFLGSLPVSS*HFLEPA
Trigger: CGCCGGCTCCAGGAAATGGCAACTGCTGACAGGAAG...GGAGCCAAGAAACACTCTGTGTGACTCTACACACACTTCAGGTGGTTTGTGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562684.5
CDS-3UTR CCA 90 bp TCATCTGGCCCCGATCTAGCAGGCAGAATGGTGTGGAGCCTCCTAGAGAGGAACGGGGATTTGTCCTCTTaGGTATGTTCTGAGGTTCTT +
Preference number: 4 (lower is better)
Translates to: SSGPDLAGRMVWSLLERNGDLSS*VCSEVL
Trigger: AAGAACCTCAGAACATACCCAAGAGGACAAATCCCC...GTTCCTCTCTAGGAGGCTCCACACCATTCTGCCTGCTAGATCGGGGCCAGATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562569.1
CDS-3UTR CCA 90 bp AAAACATGGCTACCCTATCTCTTGAGTTTCTGGTCTGGCTCCGGGTGGAGCAGTACCCAAAAATGTCGCTaGTCTTCCCTCCAGGTGGGT +
Preference number: 4 (lower is better)
Translates to: KTWLPYLLSFWSGSGWSSTQKCR*SSLQVG
Trigger: ACCCACCTGGAGGGAAGACCAGCGACATTTTTGGGT...ACTGCTCCACCCGGAGCCAGACCAGAAACTCAAGAGATAGGGTAGCCATGTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000562684.5
CDS-3UTR CCA 90 bp CAAAGTCTACAGGCAATCAAAAGGGGGAAGCTGTCTTTGGTTGACAAAGCCTTGGCTGCCTTTCTCACCTaGCTCTGCTCCAGCCGGGAT +
Preference number: 4 (lower is better)
Translates to: QSLQAIKRGKLSLVDKALAAFLT*LCSSRD
Trigger: ATCCCGGCTGGAGCAGAGCCAGGTGAGAAAGGCAGC...CAAGGCTTTGTCAACCAAAGACAGCTTCCCCCTTTTGATTGCCTGTAGACTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
CDS-3UTR CCA 90 bp GGTGTGACTTTGCTACTGAACTCCTTCATCTCCTGGCCTAAGGTCTCTAGTCTCGGATTTGCCTCCCGGTaGGTTCAGGACCTTGTTGTG +
Preference number: 4 (lower is better)
Translates to: GVTLLLNSFISWPKVSSLGFASR*VQDLVV
Trigger: CACAACAAGGTCCTGAACCCACCGGGAGGCAAATCC...GAGACTAGAGACCTTAGGCCAGGAGATGAAGGAGTTCAGTAGCAAAGTCACACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
CDS-3UTR CCA 90 bp ATGCTGGATTTAGCAGCCGTGATCTCCAGAATGGAAGCGGTTCTGCTAAGAGGTTCAGATGGCAGGAACTaGGCACTTCAGAGGGTCAGG +
Preference number: 4 (lower is better)
Translates to: MLDLAAVISRMEAVLLRGSDGRN*ALQRVR
Trigger: CCTGACCCTCTGAAGTGCCCAGTTCCTGCCATCTGA...ACCTCTTAGCAGAACCGCTTCCATTCTGGAGATCACGGCTGCTAAATCCAGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
CDS-3UTR CCA 90 bp ACCCAGAAGTCCCTGCCAGGGGCGGAAGTAAAGAGCTTTTCCTCTCACCTAGCGCAAAGCTCAGGGAATTaGACAGGTGTGACTTTGCTA +
Preference number: 4 (lower is better)
Translates to: TQKSLPGAEVKSFSSHLAQSSGN*TGVTLL
Trigger: TAGCAAAGTCACACCTGTCCAATTCCCTGAGCTTTG...CGCTAGGTGAGAGGAAAAGCTCTTTACTTCCGCCCCTGGCAGGGACTTCTGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
CDS-3UTR TCA 90 bp AAATCTTCCAAATACAGGCAGTCCCCAACGTACAGACATACAGGACACCTCCCAGGCTACCCTATCTCTTaGGTTTCTGGTCTGGCTCCG +
Preference number: 4 (lower is better)
Translates to: KSSKYRQSPTYRHTGHLPGYPIS*VSGLAP
Trigger: CGGAGCCAGACCAGAAACTCAAGAGATAGGGTAGCC...TGGGAGGTGTCCTGTATGTCTGTACGTTGGGGACTGCCTGTATTTGGAAGATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
CDS-3UTR TCA 90 bp CCTTCATCTCCTGGCCTAAGGTCTCTAGTCTCTTCTGGAAGCTTGTTTGTGAGTCAGGCACTTAAGCAGTaGGGCAGCATGAGCCTGACT +
Preference number: 4 (lower is better)
Translates to: PSSPGLRSLVSSGSLFVSQALKQ*GSMSLT
Trigger: AGTCAGGCTCATGCTGCCTCACTGCTTAAGTGCCTG...ACTCACAAACAAGCTTCCAGAAGAGACTAGAGACCTTAGGCCAGGAGATGAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
CDS-3UTR TCA 90 bp AAGCACAAACCACCTGAAGTGTGTGTAGAGTCACACAGAGTGTTTCTTGGCTCCCAAAGACTACAGACCTaGGCCACCATGCCCACCTGT +
Preference number: 4 (lower is better)
Translates to: KHKPPEVCVESHRVFLGSQRLQT*ATMPTC
Trigger: ACAGGTGGGCATGGTGGCTCAGGTCTGTAGTCTTTG...GGAGCCAAGAAACACTCTGTGTGACTCTACACACACTTCAGGTGGTTTGTGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000248098.8
CDS-3UTR GCA 90 bp CCCCATTTCATCCCCACAGAGGCATCTCCCAGCCATCTGGAAGGCACGGGTCTCTCCAAAAATATTAGATaGCATCCTATTAGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: PHFIPTEASPSHLEGTGLSKNIR*HPIRPA
Trigger: AGCAGGCCTAATAGGATGGCATCTAATATTTTTGGA...GAGACCCGTGCCTTCCAGATGGCTGGGAGATGCCTCTGTGGGGATGAAATGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
CDS-3UTR GCA 90 bp GTGCCCCATTTCATCCCCACAGAGGCATCTCCCAGCCATCTGGAAGGCACGGGTTCCAAAAATATTAGATaGCATCCTATTAGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: VPHFIPTEASPSHLEGTGSKNIR*HPIRPA
Trigger: AGCAGGCCTAATAGGATGGCATCTAATATTTTTGGA...ACCCGTGCCTTCCAGATGGCTGGGAGATGCCTCTGTGGGGATGAAATGGGGCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
CDS-3UTR GCA 90 bp CCTTCATCTCCTGGCCTAAGGTCTCTAGTCTCTTCTGGAAGCTTGTTTGTGAGTCTGCTTTTCTGGCGCTaGCTTTCTCACCTGGCTCTG +
Preference number: 4 (lower is better)
Translates to: PSSPGLRSLVSSGSLFVSLLFWR*LSHLAL
Trigger: CAGAGCCAGGTGAGAAAGGCAGCGCCAGAAAAGCAG...ACTCACAAACAAGCTTCCAGAAGAGACTAGAGACCTTAGGCCAGGAGATGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
CDS-3UTR GCA 90 bp ATCTCCAGAATGGAAGCGGTTCTGCTAAGAGGTCAATATACTGTTAGTGTTTCTCCAAGGACCATGCCCTaGCCCACCTCCCCACCCTCA +
Preference number: 4 (lower is better)
Translates to: ISRMEAVLLRGQYTVSVSPRTMP*PTSPPS
Trigger: TGAGGGTGGGGAGGTGGGGCAGGGCATGGTCCTTGG...AGAAACACTAACAGTATATTGACCTCTTAGCAGAACCGCTTCCATTCTGGAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248098.8
ENST00000561516.5
ENST00000562684.5
CDS-3UTR GCA 90 bp ATTTTTAAAGTCCCGCAGAGGTCAGCGGGCCTCATTTATGGGAAGAACTGTGACTCTCACCTAGCGGACTaGAAGGGCTGGGAGAATCAC +
Preference number: 4 (lower is better)
Translates to: IFKVPQRSAGLIYGKNCDSHLAD*KGWENH
Trigger: GTGATTCTCCCAGCCCTTGCAGTCCGCTAGGTGAGA...GTCACAGTTCTTCCCATAAATGAGGCCCGCTGACCTCTGCGGGACTTTAAAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
CDS-3UTR GCA 90 bp GTCATTCCTAGACATCCAATCAGCTGGCGGGCTGTTGATCCAAGGACCATGCCCAGAAGGCAGGACAGATaGAAGAAGAGTAATGTCAGG +
Preference number: 4 (lower is better)
Translates to: VIPRHPISWRAVDPRTMPRRQDR*KKSNVR
Trigger: CCTGACATTACTCTTCTTGCATCTGTCCTGCCTTCT...GGGCATGGTCCTTGGATCAACAGCCCGCCAGCTGATTGGATGTCTAGGAATGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
CDS-3UTR GCA 90 bp GTTTCTGCTTACGCCTCCTCCATCCCACAGCAGCAGTGGACAGGCTGTTTTGGTAGAAGGCAGGACAGATaGAAGAAGAGTAATGTCAGG +
Preference number: 4 (lower is better)
Translates to: VSAYASSIPQQQWTGCFGRRQDR*KKSNVR
Trigger: CCTGACATTACTCTTCTTGCATCTGTCCTGCCTTCT...ACCAAAACAGCCTGTCCACTGCTGCTGTGGGATGGAGGAGGCGTAAGCAGAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
CDS-3UTR GCA 90 bp GTCATTCCTAGACATCCAATCAGCTGGCGGGCTGTTGATCCAAGGACCATGCCCCGAGTCATTTCTCAATaGAGCTTAGAGGGTGAGAAC +
Preference number: 4 (lower is better)
Translates to: VIPRHPISWRAVDPRTMPRVISQ*SLEGEN
Trigger: GTTCTCACCCTCTAAGCTGCATTGAGAAATGACTCG...GGGCATGGTCCTTGGATCAACAGCCCGCCAGCTGATTGGATGTCTAGGAATGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
CDS-3UTR CCA 90 bp ATGGCTACCCTATCTCTTGAGTTTCTGGTCTGGCTCCGGGTGGAGCAGTGGCTTGGGGATTTGTCCTCTTaGGTATGTTCTGAGGTTCTT +
Preference number: 4 (lower is better)
Translates to: MATLSLEFLVWLRVEQWLGDLSS*VCSEVL
Trigger: AAGAACCTCAGAACATACCCAAGAGGACAAATCCCC...AAGCCACTGCTCCACCCGGAGCCAGACCAGAAACTCAAGAGATAGGGTAGCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
CDS-3UTR CCA 90 bp AAGCGTGAAGTGGCAGTGACCGGAGACCCAAAAATGTCGCTGGTCTTCCCTCCAGGGGATTTGTCCTCTTaGGTATGTTCTGAGGTTCTT +
Preference number: 4 (lower is better)
Translates to: KREVAVTGDPKMSLVFPPGDLSS*VCSEVL
Trigger: AAGAACCTCAGAACATACCCAAGAGGACAAATCCCC...TGGAGGGAAGACCAGCGACATTTTTGGGTCTCCGGTCACTGCCACTTCACGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566925.5
CDS-3UTR CCA 90 bp GGCTCACATAAGACTAACCCTCTTCCCACCCCGCTCATTTGGGCAAAAGGAAATACTTCCTTTACCCCCTaGGGGATTTGTCCTCTTGGG +
Preference number: 4 (lower is better)
Translates to: GSHKTNPLPTPLIWAKGNTSFTP*GICPLG
Trigger: CCCAAGAGGACAAATCCCCCAGGGGGTAAAGGAAGT...ATTTCCTTTTGCCCAAATGAGCGGGGTGGGAAGAGGGTTAGTCTTATGTGAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000562684.5
CDS-3UTR CCA 90 bp GCTACCCTATCTCTTGAGTTTCTGGTCTGGCTCCGGGTGGAGCAGTGGCTTCTCAGAAAACATGATCCTTaGGTTTGTTTGGGTGTGCCA +
Preference number: 4 (lower is better)
Translates to: ATLSLEFLVWLRVEQWLLRKHDP*VCLGVP
Trigger: TGGCACACCCAAACAAACCCAAGGATCATGTTTTCT...GAGAAGCCACTGCTCCACCCGGAGCCAGACCAGAAACTCAAGAGATAGGGTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000562684.5
CDS-3UTR CCA 90 bp ATCTCCAGAATGGAAGCGGTTCTGCTAAGAGGTCAATATACTGTTAGTGTTTCTCCCAGCCGGGGCTCATaGCTGTCGACTGTGGGCATG +
Preference number: 4 (lower is better)
Translates to: ISRMEAVLLRGQYTVSVSPSRGS*LSTVGM
Trigger: CATGCCCACAGTCGACAGCCATGAGCCCCGGCTGGG...AGAAACACTAACAGTATATTGACCTCTTAGCAGAACCGCTTCCATTCTGGAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248098.8
ENST00000561516.5
ENST00000562684.5
CDS-3UTR CCA 90 bp CCTTCATCTCCTGGCCTAAGGTCTCTAGTCTCTTCTGGAAGCTTGTTTGTGAGTGGATTTGCCTCCCGGTaGGTTCAGGACCTTGTTGTG +
Preference number: 4 (lower is better)
Translates to: PSSPGLRSLVSSGSLFVSGFASR*VQDLVV
Trigger: CACAACAAGGTCCTGAACCCACCGGGAGGCAAATCC...ACTCACAAACAAGCTTCCAGAAGAGACTAGAGACCTTAGGCCAGGAGATGAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
CDS-3UTR CCA 90 bp GGCTCACATAAGACTAACCCTCTTCCCACCCCGCTCATTTGGGCAAAAGGAAATAGTAGAAGGAGATGCTaGATTTGCCTCCCGGTGGGT +
Preference number: 4 (lower is better)
Translates to: GSHKTNPLPTPLIWAKGNSRRRC*ICLPVG
Trigger: ACCCACCGGGAGGCAAATCCAGCATCTCCTTCTACT...ATTTCCTTTTGCCCAAATGAGCGGGGTGGGAAGAGGGTTAGTCTTATGTGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
CDS-3UTR CCA 90 bp ATGCTGGATTTAGCAGCCGTGATCTCCAGAATGGAAGCGGTTCTGCTAAGAGGTCTCCGGGTGGAGCAGTaGCTTCTCTTAGTAGAAGGA +
Preference number: 4 (lower is better)
Translates to: MLDLAAVISRMEAVLLRGLRVEQ*LLLVEG
Trigger: TCCTTCTACTAAGAGAAGCCACTGCTCCACCCGGAG...ACCTCTTAGCAGAACCGCTTCCATTCTGGAGATCACGGCTGCTAAATCCAGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248098.8
ENST00000561516.5
ENST00000562684.5
CDS-3UTR CCA 90 bp GGCTCACATAAGACTAACCCTCTTCCCACCCCGCTCATTTGGGCAAAAGGAAATTATCTCTTGAGTTTCTaGTCTGGCTCCGGGTGGAGC +
Preference number: 4 (lower is better)
Translates to: GSHKTNPLPTPLIWAKGNYLLSF*SGSGWS
Trigger: GCTCCACCCGGAGCCAGACCAGAAACTCAAGAGATA...ATTTCCTTTTGCCCAAATGAGCGGGGTGGGAAGAGGGTTAGTCTTATGTGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
CDS-3UTR CCA 90 bp TGCAAGGGCTGGGAGAATCACAGGGCCCAGTACCGTCACGTCCTATTTCTTCCTACACAGAGTGTTTCTTaGCTCCAAAGTCTACAGGCA +
Preference number: 4 (lower is better)
Translates to: CKGWENHRAQYRHVLFLPTQSVS*LQSLQA
Trigger: TGCCTGTAGACTTTGGAGCCAAGAAACACTCTGTGT...AGGAAGAAATAGGACGTGACGGTACTGGGCCCTGTGATTCTCCCAGCCCTTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
CDS-3UTR CCA 90 bp TCTTTCTCAAGCGTTGACTTTCATCTCATCTGGCCCCGATCTAGCAGGCAGAATGCAGGCAGAATGGTGTaGAGCCTCCTAGAGAGGAAC +
Preference number: 4 (lower is better)
Translates to: SFSSVDFHLIWPRSSRQNAGRMV*SLLERN
Trigger: GTTCCTCTCTAGGAGGCTCCACACCATTCTGCCTGC...ATTCTGCCTGCTAGATCGGGGCCAGATGAGATGAAAGTCAACGCTTGAGAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562569.1
CDS-3UTR CCA 90 bp CTTTCTCAAGCGTTGACTTTCATCTCATCTGGCCCCGATCTAGCAGGCAGAATGGACTTTCATCTCATCTaGCCCCGATCTAGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: LSQALTFISSGPDLAGRMDFHLI*PRSSRQ
Trigger: CTGCCTGCTAGATCGGGGCCAGATGAGATGAAAGTC...CATTCTGCCTGCTAGATCGGGGCCAGATGAGATGAAAGTCAACGCTTGAGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562569.1
CDS-3UTR TCA 90 bp TGCAAGGGCTGGGAGAATCACAGGGCCCAGTACCGTCACGTCCTATTTCTTCCTCTGGAAGCTTGTTTGTaGGTTAGATCCAGAAGTTCT +
Preference number: 4 (lower is better)
Translates to: CKGWENHRAQYRHVLFLPLEACL*VRSRSS
Trigger: AGAACTTCTGGATCTAACTCACAAACAAGCTTCCAG...AGGAAGAAATAGGACGTGACGGTACTGGGCCCTGTGATTCTCCCAGCCCTTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
CDS-3UTR TCA 90 bp ACTTTCATCTCATCTGGCCCCGATCTAGCAGGCAGAATGGTGTGGAGCCTCCTATTCTTTCTCAAGCGTTaGCTTTCATCTCATCTGGCC +
Preference number: 4 (lower is better)
Translates to: TFISSGPDLAGRMVWSLLFFLKR*LSSHLA
Trigger: GGCCAGATGAGATGAAAGTCAACGCTTGAGAAAGAA...TAGGAGGCTCCACACCATTCTGCCTGCTAGATCGGGGCCAGATGAGATGAAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562569.1
CDS-3UTR TCA 90 bp CTGGCTCCGGGTGGAGCAGTGGCTTCTCTTAGTAGAAGGAGATGCTGGATTTGCTCACATAAGAAAACATaGTCCTGGGGGATTTGTCCT +
Preference number: 4 (lower is better)
Translates to: LAPGGAVASLSRRRCWICSHKKT*SWGICP
Trigger: AGGACAAATCCCCCAGGATCATGTTTTCTTATGTGA...GCAAATCCAGCATCTCCTTCTACTAAGAGAAGCCACTGCTCCACCCGGAGCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000561516.5
ENST00000569765.5
CDS-3UTR GCA 90 bp GACCGGAGACCCAAAAATGTCGCTGGTCTTCCCTCCAGGTGGGTTCAGGTGCTGTCCAAAAATATTAGATaGCATCCTATTAGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: DRRPKNVAGLPSRWVQVLSKNIR*HPIRPA
Trigger: AGCAGGCCTAATAGGATGGCATCTAATATTTTTGGA...CAGCACCTGAACCCACCTGGAGGGAAGACCAGCGACATTTTTGGGTCTCCGGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000566925.5
CDS-3UTR GCA 90 bp CAAAGTCTACAGGCAATCAAAAGGGGGAAGCTGTCTTTGGTTGACAAAGCCTTGAGGTGCTGTCGAGTCTaGACGGGGGTTGATTCGTCA +
Preference number: 4 (lower is better)
Translates to: QSLQAIKRGKLSLVDKALRCCRV*TGVDSS
Trigger: TGACGAATCAACCCCCGTGCAGACTCGACAGCACCT...CAAGGCTTTGTCAACCAAAGACAGCTTCCCCCTTTTGATTGCCTGTAGACTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
CDS-3UTR GCA 90 bp AAGCACAAACCACCTGAAGTGTGTGTAGAGTCACACAGAGTGTTTCTTGGCTCCACAGCAGGGCTTGCATaGGCAGGAACTCTTCTTCTC +
Preference number: 4 (lower is better)
Translates to: KHKPPEVCVESHRVFLGSTAGLA*AGTLLL
Trigger: GAGAAGAAGAGTTCCTGCGCATGCAAGCCCTGCTGT...GGAGCCAAGAAACACTCTGTGTGACTCTACACACACTTCAGGTGGTTTGTGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
CDS-3UTR GCA 90 bp GTTCCTCTCAAACCTGGACTACACATGAGTGATGGCCAGGGGTGCCCCATTTCACGAGTCATTTCTCAATaGAGCTTAGAGGGTGAGAAC +
Preference number: 4 (lower is better)
Translates to: VPLKPGLHMSDGQGCPISRVISQ*SLEGEN
Trigger: GTTCTCACCCTCTAAGCTGCATTGAGAAATGACTCG...TGAAATGGGGCACCCCTGGCCATCACTCATGTGTAGTCCAGGTTTGAGAGGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
CDS-3UTR GCA 90 bp AAAACATGGCTACCCTATCTCTTGAGTTTCTGGTCTGGCTCCGGGTGGAGCAGTTTTTACACAGGGTCTTaGTCTGTGGTCCAGGCTGAA +
Preference number: 4 (lower is better)
Translates to: KTWLPYLLSFWSGSGWSSFYTGS*SVVQAE
Trigger: TTCAGCCTGGACCACAGAGCAAGACCCTGTGTAAAA...ACTGCTCCACCCGGAGCCAGACCAGAAACTCAAGAGATAGGGTAGCCATGTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000248098.8
CDS-3UTR CCA 90 bp TTGATTCGTCAAAGATACCACTTCCTTTACCCCCTGGGGGATTTGTCCTCTTGGACCCAAAAATGTCGCTaGTCTTCCCTCCAGGTGGGT +
Preference number: 4 (lower is better)
Translates to: LIRQRYHFLYPLGDLSSWTQKCR*SSLQVG
Trigger: ACCCACCTGGAGGGAAGACCAGCGACATTTTTGGGT...CCAAGAGGACAAATCCCCCAGGGGGTAAAGGAAGTGGTATCTTTGACGAATCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000566925.5
CDS-3UTR CCA 90 bp TGGCTCCGGGTGGAGCAGTGGCTTCTCTTAGTAGAAGGAGATGCTGGATTTGCCGTGGACAGGCTGTTTTaGTTTCTTTCAGTCATTCCT +
Preference number: 4 (lower is better)
Translates to: WLRVEQWLLLVEGDAGFAVDRLF*FLSVIP
Trigger: AGGAATGACTGAAAGAAACCAAAACAGCCTGTCCAC...GGCAAATCCAGCATCTCCTTCTACTAAGAGAAGCCACTGCTCCACCCGGAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561516.5
CDS-3UTR CCA 90 bp CAAAGTCTACAGGCAATCAAAAGGGGGAAGCTGTCTTTGGTTGACAAAGCCTTGTCAGATGGCAGGAACTaGGCACTTCAGAGGGTCAGG +
Preference number: 4 (lower is better)
Translates to: QSLQAIKRGKLSLVDKALSDGRN*ALQRVR
Trigger: CCTGACCCTCTGAAGTGCCCAGTTCCTGCCATCTGA...CAAGGCTTTGTCAACCAAAGACAGCTTCCCCCTTTTGATTGCCTGTAGACTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
3UTR CAA 72 bp AGTGAGCAAAGCTCAGGGAATTGGACAGGTGTGACTTaGCTACTGAACTCCTTCATCTCCTGGCCTAAGGTC +
Preference number: 4 (lower is better)
Translates to: SEQSSGNWTGVT*LLNSFISWPKV
Trigger: GACCTTAGGCCAGGAGATGAAGGAGTTCAGTAGCAAAGTCACACCTGTCCAATTCCCTGAGCTTTGCTCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
CDS-3UTR TCA 90 bp CACATAAGACTAACCCTCTTCCCACCCCGCTCATTTGGGCAAAAGGAAATGAAAAGGCAGATTCCAACATaGGATCAGATCAGGCCGAGG +
Preference number: 4 (lower is better)
Translates to: HIRLTLFPPRSFGQKEMKRQIPT*DQIRPR
Trigger: CCTCGGCCTGATCTGATCTCATGTTGGAATCTGCCT...TTTCATTTCCTTTTGCCCAAATGAGCGGGGTGGGAAGAGGGTTAGTCTTATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
CDS-3UTR TCA 90 bp CCTCCCAAATGTAAACGACAGCCACACAGCAGGGCTTGCATGCGCAGGAACTCTACGCTCCTATCAAAATaGCATTGTGATGTGAGTACA +
Preference number: 4 (lower is better)
Translates to: PPKCKRQPHSRACMRRNSTLLSK*HCDVST
Trigger: TGTACTCACATCACAATGTCATTTTGATAGGAGCGT...AGAGTTCCTGCGCATGCAAGCCCTGCTGTGTGGCTGTCGTTTACATTTGGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
CDS-3UTR GCA 90 bp GCTACCCTATCTCTTGAGTTTCTGGTCTGGCTCCGGGTGGAGCAGTGGCTTCTCTCCAAAAATATTAGATaGCATCCTATTAGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: ATLSLEFLVWLRVEQWLLSKNIR*HPIRPA
Trigger: AGCAGGCCTAATAGGATGGCATCTAATATTTTTGGA...GAGAAGCCACTGCTCCACCCGGAGCCAGACCAGAAACTCAAGAGATAGGGTAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
CDS-3UTR GCA 90 bp CCGAGGTTTCAGATGGCAGGAACTGGGCACTTCAGAGGGTCAGGGCACCAAAACTCCAAAAATATTAGATaGCATCCTATTAGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: PRFQMAGTGHFRGSGHQNSKNIR*HPIRPA
Trigger: AGCAGGCCTAATAGGATGGCATCTAATATTTTTGGA...GTTTTGGTGCCCTGACCCTCTGAAGTGCCCAGTTCCTGCCATCTGAAACCTCGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
CDS-3UTR GCA 90 bp AAATCTTCCAAATACAGGCAGTCCCCAACGTACAGACATACAGGACACCTCCCAATGGGCAGAGGCTTCTaGCTGAAGATGAAAGCACCA +
Preference number: 4 (lower is better)
Translates to: KSSKYRQSPTYRHTGHLPMGRGF*LKMKAP
Trigger: TGGTGCTTTCATCTTCAGGCAGAAGCCTCTGCCCAT...TGGGAGGTGTCCTGTATGTCTGTACGTTGGGGACTGCCTGTATTTGGAAGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
CDS-3UTR GCA 90 bp CAAAGTCTACAGGCAATCAAAAGGGGGAAGCTGTCTTTGGTTGACAAAGCCTTGTCCTCTGTTAACAGATaGCCACCCAAGGGCAGCATG +
Preference number: 4 (lower is better)
Translates to: QSLQAIKRGKLSLVDKALSSVNR*PPKGSM
Trigger: CATGCTGCCCTTGGGTGGGCATCTGTTAACAGAGGA...CAAGGCTTTGTCAACCAAAGACAGCTTCCCCCTTTTGATTGCCTGTAGACTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
CDS-3UTR CCA 90 bp AGAATGGAAGCGGTTCTGCTAAGAGGTCAATATACTGTTAGTGTTTCTGCTTACGCTCGATTCTCCTCCTaGGGGCTTCATGGCCCTGGA +
Preference number: 4 (lower is better)
Translates to: RMEAVLLRGQYTVSVSAYARFSS*GLHGPG
Trigger: TCCAGGGCCATGAAGCCCCCAGGAGGAGAATCGAGC...GTAAGCAGAAACACTAACAGTATATTGACCTCTTAGCAGAACCGCTTCCATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000561516.5
CDS-3UTR CCA 90 bp ATGGCTACCCTATCTCTTGAGTTTCTGGTCTGGCTCCGGGTGGAGCAGTGGCTTAGGAGTAGCTTCTTCTaGACTTCCAAAAAGATTGCT +
Preference number: 4 (lower is better)
Translates to: MATLSLEFLVWLRVEQWLRSSFF*TSKKIA
Trigger: AGCAATCTTTTTGGAAGTCCAGAAGAAGCTACTCCT...AAGCCACTGCTCCACCCGGAGCCAGACCAGAAACTCAAGAGATAGGGTAGCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
CDS-3UTR CCA 90 bp AAGCGTGAAGTGGCAGTGACCGGAGACCCAAAAATGTCGCTGGTCTTCCCTCCAAGGAGTAGCTTCTTCTaGACTTCCAAAAAGATTGCT +
Preference number: 4 (lower is better)
Translates to: KREVAVTGDPKMSLVFPPRSSFF*TSKKIA
Trigger: AGCAATCTTTTTGGAAGTCCAGAAGAAGCTACTCCT...TGGAGGGAAGACCAGCGACATTTTTGGGTCTCCGGTCACTGCCACTTCACGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000566925.5
CDS-3UTR TCA 90 bp ATCTCCAGAATGGAAGCGGTTCTGCTAAGAGGTCAATATACTGTTAGTGTTTCTAACCTGGACTACACATaGGTGATGGCCAGGGGTGCC +
Preference number: 4 (lower is better)
Translates to: ISRMEAVLLRGQYTVSVSNLDYT*VMARGA
Trigger: GGCACCCCTGGCCATCACTCATGTGTAGTCCAGGTT...AGAAACACTAACAGTATATTGACCTCTTAGCAGAACCGCTTCCATTCTGGAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248098.8
ENST00000561516.5
ENST00000562684.5
CDS-3UTR TCA 90 bp GTCATTCCTAGACATCCAATCAGCTGGCGGGCTGTTGATCCAAGGACCATGCCCCAAAACAATCTTCCATaGAGTAGAAGACGGATAACT +
Preference number: 4 (lower is better)
Translates to: VIPRHPISWRAVDPRTMPQNNLP*SRRRIT
Trigger: AGTTATCCGTCTTCTACTTCATGGAAGATTGTTTTG...GGGCATGGTCCTTGGATCAACAGCCCGCCAGCTGATTGGATGTCTAGGAATGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
CDS-3UTR TCA 90 bp AAGCACAAACCACCTGAAGTGTGTGTAGAGTCACACAGAGTGTTTCTTGGCTCCGAAGCACAAACCACCTaGAGTGTGTGTAGAGTCACA +
Preference number: 4 (lower is better)
Translates to: KHKPPEVCVESHRVFLGSEAQTT*SVCRVT
Trigger: TGTGACTCTACACACACTTCAGGTGGTTTGTGCTTC...GGAGCCAAGAAACACTCTGTGTGACTCTACACACACTTCAGGTGGTTTGTGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
CDS-3UTR GCA 90 bp GTCATTCCTAGACATCCAATCAGCTGGCGGGCTGTTGATCCAAGGACCATGCCCTCCAAAAATATTAGATaGCATCCTATTAGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: VIPRHPISWRAVDPRTMPSKNIR*HPIRPA
Trigger: AGCAGGCCTAATAGGATGGCATCTAATATTTTTGGA...GGGCATGGTCCTTGGATCAACAGCCCGCCAGCTGATTGGATGTCTAGGAATGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000248098.8
ENST00000561516.5
ENST00000562684.5
CDS-3UTR CCA 90 bp GTTCCTCTCAAACCTGGACTACACATGAGTGATGGCCAGGGGTGCCCCATTTCAAGGAGTAGCTTCTTCTaGACTTCCAAAAAGATTGCT +
Preference number: 4 (lower is better)
Translates to: VPLKPGLHMSDGQGCPISRSSFF*TSKKIA
Trigger: AGCAATCTTTTTGGAAGTCCAGAAGAAGCTACTCCT...TGAAATGGGGCACCCCTGGCCATCACTCATGTGTAGTCCAGGTTTGAGAGGAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
CDS-3UTR CCA 90 bp GCTCACATAAGACTAACCCTCTTCCCACCCCGCTCATTTGGGCAAAAGGAAATGGGGGATTTGTCCTCTTaGGTATGTTCTGAGGTTCTT +
Preference number: 4 (lower is better)
Translates to: AHIRLTLFPPRSFGQKEMGDLSS*VCSEVL
Trigger: AAGAACCTCAGAACATACCCAAGAGGACAAATCCCC...CATTTCCTTTTGCCCAAATGAGCGGGGTGGGAAGAGGGTTAGTCTTATGTGAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
CDS-3UTR CCA 90 bp AAAACATGGCTACCCTATCTCTTGAGTTTCTGGTCTGGCTCCGGGTGGAGCAGTAGAAAACATGATCCTTaGGTTTGTTTGGGTGTGCCA +
Preference number: 4 (lower is better)
Translates to: KTWLPYLLSFWSGSGWSSRKHDP*VCLGVP
Trigger: TGGCACACCCAAACAAACCCAAGGATCATGTTTTCT...ACTGCTCCACCCGGAGCCAGACCAGAAACTCAAGAGATAGGGTAGCCATGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000562684.5
CDS-3UTR CCA 90 bp TCTCAAGCGTTGACTTTCATCTCATCTGGCCCCGATCTAGCAGGCAGAATGGTGAGAAAACATGATCCTTaGGTTTGTTTGGGTGTGCCA +
Preference number: 4 (lower is better)
Translates to: SQALTFISSGPDLAGRMVRKHDP*VCLGVP
Trigger: TGGCACACCCAAACAAACCCAAGGATCATGTTTTCT...CACCATTCTGCCTGCTAGATCGGGGCCAGATGAGATGAAAGTCAACGCTTGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562569.1
CDS-3UTR CCA 90 bp CTGGCTCCGGGTGGAGCAGTGGCTTCTCTTAGTAGAAGGAGATGCTGGATTTGCAAGGAAATGAAAACATaGCTACCCTATCTCTTGAGT +
Preference number: 4 (lower is better)
Translates to: LAPGGAVASLSRRRCWICKEMKT*LPYLLS
Trigger: ACTCAAGAGATAGGGTAGCCATGTTTTCATTTCCTT...GCAAATCCAGCATCTCCTTCTACTAAGAGAAGCCACTGCTCCACCCGGAGCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561516.5
ENST00000569765.5
CDS-3UTR TCA 90 bp CACATAAGACTAACCCTCTTCCCACCCCGCTCATTTGGGCAAAAGGAAATGAAACTCTTGGGTATGTTCTaGGGTTCTTCTGTTGGTCCA +
Preference number: 4 (lower is better)
Translates to: HIRLTLFPPRSFGQKEMKLLGMF*GSSVGP
Trigger: TGGACCAACAGAAGAACCTCAGAACATACCCAAGAG...TTTCATTTCCTTTTGCCCAAATGAGCGGGGTGGGAAGAGGGTTAGTCTTATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
CDS-3UTR TCA 90 bp CACATAAGACTAACCCTCTTCCCACCCCGCTCATTTGGGCAAAAGGAAATGAAAGAAGCACAAACCACCTaGAGTGTGTGTAGAGTCACA +
Preference number: 4 (lower is better)
Translates to: HIRLTLFPPRSFGQKEMKEAQTT*SVCRVT
Trigger: TGTGACTCTACACACACTTCAGGTGGTTTGTGCTTC...TTTCATTTCCTTTTGCCCAAATGAGCGGGGTGGGAAGAGGGTTAGTCTTATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
CDS-3UTR TCA 90 bp CACATAAGACTAACCCTCTTCCCACCCCGCTCATTTGGGCAAAAGGAAATGAAAATGCAGCTTAGAGGGTaGGAACAGGATGCTAGGTTT +
Preference number: 4 (lower is better)
Translates to: HIRLTLFPPRSFGQKEMKMQLRG*EQDARF
Trigger: AAACCTAGCATCCTGTTCTCACCCTCTAAGCTGCAT...TTTCATTTCCTTTTGCCCAAATGAGCGGGGTGGGAAGAGGGTTAGTCTTATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
CDS-3UTR GCA 90 bp AGAATGGAAGCGGTTCTGCTAAGAGGTCAATATACTGTTAGTGTTTCTGCTTACCTGCTTTTCTGGCGCTaGCTTTCTCACCTGGCTCTG +
Preference number: 4 (lower is better)
Translates to: RMEAVLLRGQYTVSVSAYLLFWR*LSHLAL
Trigger: CAGAGCCAGGTGAGAAAGGCAGCGCCAGAAAAGCAG...GTAAGCAGAAACACTAACAGTATATTGACCTCTTAGCAGAACCGCTTCCATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248098.8
ENST00000561516.5
ENST00000562684.5
CDS-3UTR GCA 90 bp ATCTCCAGAATGGAAGCGGTTCTGCTAAGAGGTCAATATACTGTTAGTGTTTCTCTGCTTTTCTGGCGCTaGCTTTCTCACCTGGCTCTG +
Preference number: 4 (lower is better)
Translates to: ISRMEAVLLRGQYTVSVSLLFWR*LSHLAL
Trigger: CAGAGCCAGGTGAGAAAGGCAGCGCCAGAAAAGCAG...AGAAACACTAACAGTATATTGACCTCTTAGCAGAACCGCTTCCATTCTGGAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248098.8
ENST00000561516.5
ENST00000562684.5
CDS-3UTR TCA 90 bp AAGCACAAACCACCTGAAGTGTGTGTAGAGTCACACAGAGTGTTTCTTGGCTCCAAGAACTGTGACTTGTaGAGGGAACTGTCTACATCA +
Preference number: 4 (lower is better)
Translates to: KHKPPEVCVESHRVFLGSKNCDL*RELSTS
Trigger: TGATGTAGACAGTTCCCTTCACAAGTCACAGTTCTT...GGAGCCAAGAAACACTCTGTGTGACTCTACACACACTTCAGGTGGTTTGTGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
CDS-3UTR TCA 90 bp GGCTCACATAAGACTAACCCTCTTCCCACCCCGCTCATTTGGGCAAAAGGAAATACGCTCCTATCAAAATaGCATTGTGATGTGAGTACA +
Preference number: 4 (lower is better)
Translates to: GSHKTNPLPTPLIWAKGNTLLSK*HCDVST
Trigger: TGTACTCACATCACAATGTCATTTTGATAGGAGCGT...ATTTCCTTTTGCCCAAATGAGCGGGGTGGGAAGAGGGTTAGTCTTATGTGAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
CDS-3UTR CCA 90 bp GGTGTGACTTTGCTACTGAACTCCTTCATCTCCTGGCCTAAGGTCTCTAGTCTCAGGAGTAGCTTCTTCTaGACTTCCAAAAAGATTGCT +
Preference number: 4 (lower is better)
Translates to: GVTLLLNSFISWPKVSSLRSSFF*TSKKIA
Trigger: AGCAATCTTTTTGGAAGTCCAGAAGAAGCTACTCCT...GAGACTAGAGACCTTAGGCCAGGAGATGAAGGAGTTCAGTAGCAAAGTCACACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
CDS-3UTR CCA 90 bp TTGATTCGTCAAAGATACCACTTCCTTTACCCCCTGGGGGATTTGTCCTCTTGGAGAAAACATGATCCTTaGGTTTGTTTGGGTGTGCCA +
Preference number: 4 (lower is better)
Translates to: LIRQRYHFLYPLGDLSSWRKHDP*VCLGVP
Trigger: TGGCACACCCAAACAAACCCAAGGATCATGTTTTCT...CCAAGAGGACAAATCCCCCAGGGGGTAAAGGAAGTGGTATCTTTGACGAATCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000566925.5
CDS-3UTR CCA 90 bp AAAACATGGCTACCCTATCTCTTGAGTTTCTGGTCTGGCTCCGGGTGGAGCAGTAAGGAAATGAAAACATaGCTACCCTATCTCTTGAGT +
Preference number: 4 (lower is better)
Translates to: KTWLPYLLSFWSGSGWSSKEMKT*LPYLLS
Trigger: ACTCAAGAGATAGGGTAGCCATGTTTTCATTTCCTT...ACTGCTCCACCCGGAGCCAGACCAGAAACTCAAGAGATAGGGTAGCCATGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
CDS-3UTR CCA 90 bp AAATCTTCCAAATACAGGCAGTCCCCAACGTACAGACATACAGGACACCTCCCAGTGGACAGGCTGTTTTaGTTTCTTTCAGTCATTCCT +
Preference number: 4 (lower is better)
Translates to: KSSKYRQSPTYRHTGHLPVDRLF*FLSVIP
Trigger: AGGAATGACTGAAAGAAACCAAAACAGCCTGTCCAC...TGGGAGGTGTCCTGTATGTCTGTACGTTGGGGACTGCCTGTATTTGGAAGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
CDS-3UTR CCA 90 bp GGTGTGACTTTGCTACTGAACTCCTTCATCTCCTGGCCTAAGGTCTCTAGTCTCATTCACAAGCAAAACTaGCATGTAAAGGACCAAGAC +
Preference number: 4 (lower is better)
Translates to: GVTLLLNSFISWPKVSSLIHKQN*HVKDQD
Trigger: GTCTTGGTCCTTTACATGCCAGTTTTGCTTGTGAAT...GAGACTAGAGACCTTAGGCCAGGAGATGAAGGAGTTCAGTAGCAAAGTCACACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
CDS-3UTR CCA 90 bp CAAAGTCTACAGGCAATCAAAAGGGGGAAGCTGTCTTTGGTTGACAAAGCCTTGCAAAGCTCAGGGAATTaGACAGGTGTGACTTTGCTA +
Preference number: 4 (lower is better)
Translates to: QSLQAIKRGKLSLVDKALQSSGN*TGVTLL
Trigger: TAGCAAAGTCACACCTGTCCAATTCCCTGAGCTTTG...CAAGGCTTTGTCAACCAAAGACAGCTTCCCCCTTTTGATTGCCTGTAGACTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
CDS-3UTR TCA 90 bp CACATAAGACTAACCCTCTTCCCACCCCGCTCATTTGGGCAAAAGGAAATGAAAAAGAACTGTGACTTGTaGAGGGAACTGTCTACATCA +
Preference number: 4 (lower is better)
Translates to: HIRLTLFPPRSFGQKEMKKNCDL*RELSTS
Trigger: TGATGTAGACAGTTCCCTTCACAAGTCACAGTTCTT...TTTCATTTCCTTTTGCCCAAATGAGCGGGGTGGGAAGAGGGTTAGTCTTATGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
CDS-3UTR TCA 90 bp CACATAAGACTAACCCTCTTCCCACCCCGCTCATTTGGGCAAAAGGAAATGAAACTGGAAGCTTGTTTGTaGGTTAGATCCAGAAGTTCT +
Preference number: 4 (lower is better)
Translates to: HIRLTLFPPRSFGQKEMKLEACL*VRSRSS
Trigger: AGAACTTCTGGATCTAACTCACAAACAAGCTTCCAG...TTTCATTTCCTTTTGCCCAAATGAGCGGGGTGGGAAGAGGGTTAGTCTTATGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
CDS-3UTR TCA 90 bp ATGCTGGATTTAGCAGCCGTGATCTCCAGAATGGAAGCGGTTCTGCTAAGAGGTTGGCTGCTGCTTTTCTaGAGTTTAATAATGATGATG +
Preference number: 4 (lower is better)
Translates to: MLDLAAVISRMEAVLLRGWLLLF*SLIMMM
Trigger: CATCATCATTATTAAACTTCAGAAAAGCAGCAGCCA...ACCTCTTAGCAGAACCGCTTCCATTCTGGAGATCACGGCTGCTAAATCCAGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
CDS-3UTR GCA 90 bp ATCTCCAGAATGGAAGCGGTTCTGCTAAGAGGTCAATATACTGTTAGTGTTTCTTGGTCCAGGCTGAAGTaGAGTGGCATGATCATCACT +
Preference number: 4 (lower is better)
Translates to: ISRMEAVLLRGQYTVSVSWSRLK*SGMIIT
Trigger: AGTGATGATCATGCCACTGCACTTCAGCCTGGACCA...AGAAACACTAACAGTATATTGACCTCTTAGCAGAACCGCTTCCATTCTGGAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000248098.8
CDS-3UTR CCA 90 bp ATCTCCAGAATGGAAGCGGTTCTGCTAAGAGGTCAATATACTGTTAGTGTTTCTGGGGGAAGCTGTCTTTaGTTGACAAAGCCTTGTGCA +
Preference number: 4 (lower is better)
Translates to: ISRMEAVLLRGQYTVSVSGGSCL*LTKPCA
Trigger: TGCACAAGGCTTTGTCAACCAAAGACAGCTTCCCCC...AGAAACACTAACAGTATATTGACCTCTTAGCAGAACCGCTTCCATTCTGGAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
CDS-3UTR TCA 90 bp AAATCTTCCAAATACAGGCAGTCCCCAACGTACAGACATACAGGACACCTCCCACAAAACAATCTTCCATaGAGTAGAAGACGGATAACT +
Preference number: 4 (lower is better)
Translates to: KSSKYRQSPTYRHTGHLPQNNLP*SRRRIT
Trigger: AGTTATCCGTCTTCTACTTCATGGAAGATTGTTTTG...TGGGAGGTGTCCTGTATGTCTGTACGTTGGGGACTGCCTGTATTTGGAAGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
CDS-3UTR GCA 90 bp TCTTTCTCAAGCGTTGACTTTCATCTCATCTGGCCCCGATCTAGCAGGCAGAATTCCAAAAATATTAGATaGCATCCTATTAGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: SFSSVDFHLIWPRSSRQNSKNIR*HPIRPA
Trigger: AGCAGGCCTAATAGGATGGCATCTAATATTTTTGGA...ATTCTGCCTGCTAGATCGGGGCCAGATGAGATGAAAGTCAACGCTTGAGAAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562569.1
CDS-3UTR CCA 90 bp CCTTCATCTCCTGGCCTAAGGTCTCTAGTCTCTTCTGGAAGCTTGTTTGTGAGTAAGGAAATGAAAACATaGCTACCCTATCTCTTGAGT +
Preference number: 4 (lower is better)
Translates to: PSSPGLRSLVSSGSLFVSKEMKT*LPYLLS
Trigger: ACTCAAGAGATAGGGTAGCCATGTTTTCATTTCCTT...ACTCACAAACAAGCTTCCAGAAGAGACTAGAGACCTTAGGCCAGGAGATGAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
CDS-3UTR CCA 90 bp AAATCTTCCAAATACAGGCAGTCCCCAACGTACAGACATACAGGACACCTCCCAAAGGAAATGAAAACATaGCTACCCTATCTCTTGAGT +
Preference number: 4 (lower is better)
Translates to: KSSKYRQSPTYRHTGHLPKEMKT*LPYLLS
Trigger: ACTCAAGAGATAGGGTAGCCATGTTTTCATTTCCTT...TGGGAGGTGTCCTGTATGTCTGTACGTTGGGGACTGCCTGTATTTGGAAGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
CDS-3UTR CCA 90 bp CACATAAGACTAACCCTCTTCCCACCCCGCTCATTTGGGCAAAAGGAAATGAAAGTCTCTAGTCTCTTCTaGAAGCTTGTTTGTGAGTTA +
Preference number: 4 (lower is better)
Translates to: HIRLTLFPPRSFGQKEMKVSSLF*KLVCEL
Trigger: TAACTCACAAACAAGCTTCCAGAAGAGACTAGAGAC...TTTCATTTCCTTTTGCCCAAATGAGCGGGGTGGGAAGAGGGTTAGTCTTATGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
CDS-3UTR CCA 90 bp AGAATGGAAGCGGTTCTGCTAAGAGGTCAATATACTGTTAGTGTTTCTGCTTACCAGGCTGAAGTGCAGTaGCATGATCATCACTCACTA +
Preference number: 4 (lower is better)
Translates to: RMEAVLLRGQYTVSVSAYQAEVQ*HDHHSL
Trigger: TAGTGAGTGATGATCATGCCACTGCACTTCAGCCTG...GTAAGCAGAAACACTAACAGTATATTGACCTCTTAGCAGAACCGCTTCCATTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000248098.8
CDS-3UTR TCA 90 bp CAAAGTCTACAGGCAATCAAAAGGGGGAAGCTGTCTTTGGTTGACAAAGCCTTGAAAGCTCTGAGCACGTaGTTGCTAAGTTTAATTCAA +
Preference number: 4 (lower is better)
Translates to: QSLQAIKRGKLSLVDKALKALST*LLSLIQ
Trigger: TTGAATTAAACTTAGCAATCACGTGCTCAGAGCTTT...CAAGGCTTTGTCAACCAAAGACAGCTTCCCCCTTTTGATTGCCTGTAGACTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
CDS-3UTR TCA 90 bp ATCTCCAGAATGGAAGCGGTTCTGCTAAGAGGTCAATATACTGTTAGTGTTTCTAAAGCTCTGAGCACGTaGTTGCTAAGTTTAATTCAA +
Preference number: 4 (lower is better)
Translates to: ISRMEAVLLRGQYTVSVSKALST*LLSLIQ
Trigger: TTGAATTAAACTTAGCAATCACGTGCTCAGAGCTTT...AGAAACACTAACAGTATATTGACCTCTTAGCAGAACCGCTTCCATTCTGGAGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
CDS TCA 90 bp CACGTTCCGCTCCCCACCGCTTCTCCGCGCCCCGCAGCACTGCAGTaGGGAGCCGCCACAGCCCGTCTGCAGTGGGCGTCCGCCACCAGC +
Preference number: 5 (lower is better)
Translates to: HVPLPTASPRPAALQ*GAATARLQWASATS
Trigger: GCTGGTGGCGGACGCCCACTGCAGACGGGCTGTGGCGGCTCCTCACTGCAGTGCTGCGGGGCGCGGAGAAGCGGTGGGGAGCGGAACGTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567717.1
CDS GCA 90 bp TGCGGCACGTTCCGCTCCCCACCGCTTCTCCGCGCCCCGCAGCACTaGAGTGAGGAGCCGCCACAGCCCGTCTGCAGTGGGCGTCCGCCA +
Preference number: 5 (lower is better)
Translates to: CGTFRSPPLLRAPQH*SEEPPQPVCSGRPP
Trigger: TGGCGGACGCCCACTGCAGACGGGCTGTGGCGGCTCCTCACTGCAGTGCTGCGGGGCGCGGAGAAGCGGTGGGGAGCGGAACGTGCCGCA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567717.1
CDS CCA 90 bp CTTTACCCCCTGGAGCCGGCGCGGCCGCCCTCGCTATCCGGGACCTaGAACATGTCGACCGCCGCCACCCTCAGCTCGCCGCGCGCCGTT +
Preference number: 5 (lower is better)
Translates to: LYPLEPARPPSLSGT*NMSTAATLSSPRAV
Trigger: AACGGCGCGCGGCGAGCTGAGGGTGGCGGCGGTCGACATGTTCCAGGTCCCGGATAGCGAGGGCGGCCGCGCCGGCTCCAGGGGGTAAAG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569256.5
CDS CCA 90 bp TTCATGGCCCTGGAGCCGGCGCGGCCGCCCTCGCTATCCGGGACCTaGAACATGTCGACCGCCGCCACCCTCAGCTCGCCGCGCGCCGTT +
Preference number: 5 (lower is better)
Translates to: FMALEPARPPSLSGT*NMSTAATLSSPRAV
Trigger: AACGGCGCGCGGCGAGCTGAGGGTGGCGGCGGTCGACATGTTCCAGGTCCCGGATAGCGAGGGCGGCCGCGCCGGCTCCAGGGCCATGAA
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567717.1
CDS-3UTR CAA 90 bp GCGAGGCCGCGGCCCCAGCCGGGGCTCATGGCTGTCGACTGTGGGCATGGGCTCTCAGCTGGCGGGCTGTaGATCCAAGGACCATGCCCT +
Preference number: 5 (lower is better)
Translates to: ARPRPQPGLMAVDCGHGLSAGGL*IQGPCP
Trigger: AGGGCATGGTCCTTGGATCAACAGCCCGCCAGCTGA...GAGCCCATGCCCACAGTCGACAGCCATGAGCCCCGGCTGGGGCCGCGGCCTCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561516.5
CDS CCA 90 bp CATGGCCAAGGCGCCCGCCCTGCGACTCGACCCCGTTCAGATGAGTaGCAAATGTGCAGCGTCTGGTGGACCCCAAGCAGAAGCTTCCAG +
Preference number: 5 (lower is better)
Translates to: HGQGARPATRPRSDE*QMCSVWWTPSRSFQ
Trigger: CTGGAAGCTTCTGCTTGGGGTCCACCAGACGCTGCACATTTGCCACTCATCTGAACGGGGTCGAGTCGCAGGGCGGGCGCCTTGGCCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566691.5
CDS TCA 90 bp GCTTCATGGCCAAGGCGCCCGCCCTGCGACTCGACCCCGTTCAGATaGGTGGCAAATGTGCAGCGTCTGGTGGACCCCAAGCAGAAGCTT +
Preference number: 5 (lower is better)
Translates to: ASWPRRPPCDSTPFR*VANVQRLVDPKQKL
Trigger: AAGCTTCTGCTTGGGGTCCACCAGACGCTGCACATTTGCCACTCATCTGAACGGGGTCGAGTCGCAGGGCGGGCGCCTTGGCCATGAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566691.5
CDS-3UTR CAA 90 bp AGGCACGGGTCTCCAAGCAGCTGTCATGACGGCCAGGAGACGCTGAGCAGCCAGAAGGAGATGCTGGATTaGCCTCCCGGTGGGTTCAGG +
Preference number: 5 (lower is better)
Translates to: RHGSPSSCHDGQETLSSQKEMLD*PPGGFR
Trigger: CCTGAACCCACCGGGAGGCAAATCCAGCATCTCCTT...CTGGCTGCTCAGCGTCTCCTGGCCGTCATGACAGCTGCTTGGAGACCCGTGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
CDS-3UTR CAA 90 bp GGGTGCCCCATTTCATCCCCACAGAGGCATCTCCCAGCCATCTGGAAGGCACGGTCAGCTGGCGGGCTGTaGATCCAAGGACCATGCCCT +
Preference number: 5 (lower is better)
Translates to: GCPISSPQRHLPAIWKARSAGGL*IQGPCP
Trigger: AGGGCATGGTCCTTGGATCAACAGCCCGCCAGCTGA...CCGTGCCTTCCAGATGGCTGGGAGATGCCTCTGTGGGGATGAAATGGGGCACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248098.8
ENST00000561516.5
ENST00000562684.5
CDS-3UTR CAA 90 bp ATCCAATCAGCTGGCGGGCTGTTGATCCAAGGACCATGCCCTGCCCCACCTCCCAAGGAGATGCTGGATTaGCCTCCCGGTGGGTTCAGG +
Preference number: 5 (lower is better)
Translates to: IQSAGGLLIQGPCPAPPPKEMLD*PPGGFR
Trigger: CCTGAACCCACCGGGAGGCAAATCCAGCATCTCCTT...GGGAGGTGGGGCAGGGCATGGTCCTTGGATCAACAGCCCGCCAGCTGATTGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248098.8
ENST00000561516.5
ENST00000562684.5
CDS-3UTR CAA 90 bp CCCCATTTCATCCCCACAGAGGCATCTCCCAGCCATCTGGAAGGCACGGGTCTCAAGGAGATGCTGGATTaGCCTCCCGGTGGGTTCAGG +
Preference number: 5 (lower is better)
Translates to: PHFIPTEASPSHLEGTGLKEMLD*PPGGFR
Trigger: CCTGAACCCACCGGGAGGCAAATCCAGCATCTCCTT...GAGACCCGTGCCTTCCAGATGGCTGGGAGATGCCTCTGTGGGGATGAAATGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
CDS-3UTR CAA 90 bp CACGGGTCTCCAAGCAGCTGTCATGACGGCCAGGAGACGCTGAGCAGCCAGGCTTGGCTACCCTATCTCTaGAGTTTCTGGTCTGGCTCC +
Preference number: 5 (lower is better)
Translates to: HGSPSSCHDGQETLSSQAWLPYL*SFWSGS
Trigger: GGAGCCAGACCAGAAACTCAAGAGATAGGGTAGCCA...AGCCTGGCTGCTCAGCGTCTCCTGGCCGTCATGACAGCTGCTTGGAGACCCGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
CDS-3UTR CAA 90 bp CTTTCAGTCATTCCTAGACATCCAATCAGCTGGCGGGCTGTTGATCCAAGGACCCTGGGCCTGCAGCCCTaGAGGGGGATGGGCAGAGGC +
Preference number: 5 (lower is better)
Translates to: LSVIPRHPISWRAVDPRTLGLQP*RGMGRG
Trigger: GCCTCTGCCCATCCCCCTCAAGGGCTGCAGGCCCAG...GGTCCTTGGATCAACAGCCCGCCAGCTGATTGGATGTCTAGGAATGACTGAAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
CDS-3UTR CAA 90 bp CACGGGTCTCCAAGCAGCTGTCATGACGGCCAGGAGACGCTGAGCAGCCAGGCTAGGGGGAAGCTGTCTTaGGTTGACAAAGCCTTGTGC +
Preference number: 5 (lower is better)
Translates to: HGSPSSCHDGQETLSSQARGKLS*VDKALC
Trigger: GCACAAGGCTTTGTCAACCAAAGACAGCTTCCCCCT...AGCCTGGCTGCTCAGCGTCTCCTGGCCGTCATGACAGCTGCTTGGAGACCCGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
CDS-3UTR CAA 90 bp CATCCCCACAGAGGCATCTCCCAGCCATCTGGAAGGCACGGGTCTCCAAGCAGCTGGCTACCCTATCTCTaGAGTTTCTGGTCTGGCTCC +
Preference number: 5 (lower is better)
Translates to: HPHRGISQPSGRHGSPSSWLPYL*SFWSGS
Trigger: GGAGCCAGACCAGAAACTCAAGAGATAGGGTAGCCA...GCTGCTTGGAGACCCGTGCCTTCCAGATGGCTGGGAGATGCCTCTGTGGGGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
CDS-3UTR CAA 90 bp CACGGGTCTCCAAGCAGCTGTCATGACGGCCAGGAGACGCTGAGCAGCCAGGCTCAGGGTCGTAGTATGTaGTCTAGGCTGGTCTCAAAC +
Preference number: 5 (lower is better)
Translates to: HGSPSSCHDGQETLSSQAQGRSM*SRLVSN
Trigger: GTTTGAGACCAGCCTAGACAACATACTACGACCCTG...AGCCTGGCTGCTCAGCGTCTCCTGGCCGTCATGACAGCTGCTTGGAGACCCGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000248098.8
CDS-3UTR CAA 90 bp GTGCCCCATTTCATCCCCACAGAGGCATCTCCCAGCCATCTGGAAGGCACGGGTGATCCTTGGGTTTGTTaGGGTGTGCCAAGCGTGAAG +
Preference number: 5 (lower is better)
Translates to: VPHFIPTEASPSHLEGTGDPWVC*GVPSVK
Trigger: CTTCACGCTTGGCACACCCAAACAAACCCAAGGATC...ACCCGTGCCTTCCAGATGGCTGGGAGATGCCTCTGTGGGGATGAAATGGGGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000562684.5
CDS-3UTR CAA 90 bp CCCCATTTCATCCCCACAGAGGCATCTCCCAGCCATCTGGAAGGCACGGGTCTCTGGCTACCCTATCTCTaGAGTTTCTGGTCTGGCTCC +
Preference number: 5 (lower is better)
Translates to: PHFIPTEASPSHLEGTGLWLPYL*SFWSGS
Trigger: GGAGCCAGACCAGAAACTCAAGAGATAGGGTAGCCA...GAGACCCGTGCCTTCCAGATGGCTGGGAGATGCCTCTGTGGGGATGAAATGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
CDS-3UTR CAA 90 bp ATCCAATCAGCTGGCGGGCTGTTGATCCAAGGACCATGCCCTGCCCCACCTCCCGCAAAGCTCAGGGAATaGGACAGGTGTGACTTTGCT +
Preference number: 5 (lower is better)
Translates to: IQSAGGLLIQGPCPAPPPAKLRE*DRCDFA
Trigger: AGCAAAGTCACACCTGTCCAATTCCCTGAGCTTTGC...GGGAGGTGGGGCAGGGCATGGTCCTTGGATCAACAGCCCGCCAGCTGATTGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
CDS-3UTR CAA 90 bp GTGCCCCATTTCATCCCCACAGAGGCATCTCCCAGCCATCTGGAAGGCACGGGTGGACTTCCAAAAAGATaGCTCGATTCTCCTCCTGGG +
Preference number: 5 (lower is better)
Translates to: VPHFIPTEASPSHLEGTGGLPKR*LDSPPG
Trigger: CCCAGGAGGAGAATCGAGCAATCTTTTTGGAAGTCC...ACCCGTGCCTTCCAGATGGCTGGGAGATGCCTCTGTGGGGATGAAATGGGGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
CDS-3UTR CAA 90 bp CCATTTCATCCCCACAGAGGCATCTCCCAGCCATCTGGAAGGCACGGGTCTCCATACCCCCTGGGGGATTaGTCCTCTTGGGTATGTTCT +
Preference number: 5 (lower is better)
Translates to: PFHPHRGISQPSGRHGSPYPLGD*SSWVCS
Trigger: AGAACATACCCAAGAGGACAAATCCCCCAGGGGGTA...TGGAGACCCGTGCCTTCCAGATGGCTGGGAGATGCCTCTGTGGGGATGAAATGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000562684.5
CDS-3UTR CAA 90 bp CCATTTCATCCCCACAGAGGCATCTCCCAGCCATCTGGAAGGCACGGGTCTCCAGAGTCTGCACGGGGGTaGATTCGTCAAAGATACCAC +
Preference number: 5 (lower is better)
Translates to: PFHPHRGISQPSGRHGSPESARG*IRQRYH
Trigger: GTGGTATCTTTGACGAATCAACCCCCGTGCAGACTC...TGGAGACCCGTGCCTTCCAGATGGCTGGGAGATGCCTCTGTGGGGATGAAATGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000562684.5
CDS-3UTR CAA 90 bp CCATTTCATCCCCACAGAGGCATCTCCCAGCCATCTGGAAGGCACGGGTCTCCAGATCCTTGGGTTTGTTaGGGTGTGCCAAGCGTGAAG +
Preference number: 5 (lower is better)
Translates to: PFHPHRGISQPSGRHGSPDPWVC*GVPSVK
Trigger: CTTCACGCTTGGCACACCCAAACAAACCCAAGGATC...TGGAGACCCGTGCCTTCCAGATGGCTGGGAGATGCCTCTGTGGGGATGAAATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000562684.5
CDS-3UTR CAA 90 bp GTTCCTCTCAAACCTGGACTACACATGAGTGATGGCCAGGGGTGCCCCATTTCATCAGCTGGCGGGCTGTaGATCCAAGGACCATGCCCT +
Preference number: 5 (lower is better)
Translates to: VPLKPGLHMSDGQGCPISSAGGL*IQGPCP
Trigger: AGGGCATGGTCCTTGGATCAACAGCCCGCCAGCTGA...TGAAATGGGGCACCCCTGGCCATCACTCATGTGTAGTCCAGGTTTGAGAGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248098.8
ENST00000561516.5
ENST00000562684.5
CDS-3UTR CAA 90 bp CACATAAGACTAACCCTCTTCCCACCCCGCTCATTTGGGCAAAAGGAAATGAAACTGGGCCTGCAGCCCTaGAGGGGGATGGGCAGAGGC +
Preference number: 5 (lower is better)
Translates to: HIRLTLFPPRSFGQKEMKLGLQP*RGMGRG
Trigger: GCCTCTGCCCATCCCCCTCAAGGGCTGCAGGCCCAG...TTTCATTTCCTTTTGCCCAAATGAGCGGGGTGGGAAGAGGGTTAGTCTTATGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
CDS-3UTR CAA 90 bp CATCCCCACAGAGGCATCTCCCAGCCATCTGGAAGGCACGGGTCTCCAAGCAGCATGATCCTGGGGGATTaGTCCTCTTGGGTATGTTCT +
Preference number: 5 (lower is better)
Translates to: HPHRGISQPSGRHGSPSSMILGD*SSWVCS
Trigger: AGAACATACCCAAGAGGACAAATCCCCCAGGATCAT...GCTGCTTGGAGACCCGTGCCTTCCAGATGGCTGGGAGATGCCTCTGTGGGGATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000561516.5
ENST00000569765.5
CDS TCA 90 bp TCCATACCTTGGGTTTGTTTGGGTGTGCCAAGCGTGAAGTGGCAGTaGCCGGAGACCCAAAAATGTCGCTGGTCTTCCCTCCAGGTGGGT +
Preference number: 5 (lower is better)
Translates to: SIPWVCLGVPSVKWQ*PETQKCRWSSLQVG
Trigger: ACCCACCTGGAGGGAAGACCAGCGACATTTTTGGGTCTCCGGTCACTGCCACTTCACGCTTGGCACACCCAAACAAACCCAAGGTATGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567717.1
CDS TCA 90 bp ACCTTGACTTGGGTTTGTTTGGGTGTGCCAAGCGTGAAGTGGCAGTaGCCGGAGACCCAAAAATGTCGCTGGTCTTCCCTCCAGGTGGGT +
Preference number: 5 (lower is better)
Translates to: TLTWVCLGVPSVKWQ*PETQKCRWSSLQVG
Trigger: ACCCACCTGGAGGGAAGACCAGCGACATTTTTGGGTCTCCGGTCACTGCCACTTCACGCTTGGCACACCCAAACAAACCCAAGTCAAGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568376.1
CDS-3UTR CAA 90 bp CTTCCAGTTCCTCTCAAACCTGGACTACACATGAGTGATGGCCAGGGGTGCCCCTACCCCCTGGGGGATTaGTCCTCTTGGGTATGTTCT +
Preference number: 5 (lower is better)
Translates to: LPVPLKPGLHMSDGQGCPYPLGD*SSWVCS
Trigger: AGAACATACCCAAGAGGACAAATCCCCCAGGGGGTA...GGGGCACCCCTGGCCATCACTCATGTGTAGTCCAGGTTTGAGAGGAACTGGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000562684.5
CDS-3UTR CAA 90 bp CCCCTTCCAGTTCCTCTCAAACCTGGACTACACATGAGTGATGGCCAGGGGTGCTACCCCCTGGGGGATTaGTCCTCTTGGGTATGTTCT +
Preference number: 5 (lower is better)
Translates to: PLPVPLKPGLHMSDGQGCYPLGD*SSWVCS
Trigger: AGAACATACCCAAGAGGACAAATCCCCCAGGGGGTA...GCACCCCTGGCCATCACTCATGTGTAGTCCAGGTTTGAGAGGAACTGGAAGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000562684.5
CDS-3UTR CAA 90 bp CTTCCAGTTCCTCTCAAACCTGGACTACACATGAGTGATGGCCAGGGGTGCCCCGAGTCTGCACGGGGGTaGATTCGTCAAAGATACCAC +
Preference number: 5 (lower is better)
Translates to: LPVPLKPGLHMSDGQGCPESARG*IRQRYH
Trigger: GTGGTATCTTTGACGAATCAACCCCCGTGCAGACTC...GGGGCACCCCTGGCCATCACTCATGTGTAGTCCAGGTTTGAGAGGAACTGGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000562684.5
CDS-3UTR CAA 90 bp GCTACCCTATCTCTTGAGTTTCTGGTCTGGCTCCGGGTGGAGCAGTGGCTTCTCGAGTCTGCACGGGGGTaGATTCGTCAAAGATACCAC +
Preference number: 5 (lower is better)
Translates to: ATLSLEFLVWLRVEQWLLESARG*IRQRYH
Trigger: GTGGTATCTTTGACGAATCAACCCCCGTGCAGACTC...GAGAAGCCACTGCTCCACCCGGAGCCAGACCAGAAACTCAAGAGATAGGGTAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000562684.5
CDS-3UTR CAA 90 bp ACCCAGAAGTCCCTGCCAGGGGCGGAAGTAAAGAGCTTTTCCTCTCACCTAGCGGATCCTTGGGTTTGTTaGGGTGTGCCAAGCGTGAAG +
Preference number: 5 (lower is better)
Translates to: TQKSLPGAEVKSFSSHLADPWVC*GVPSVK
Trigger: CTTCACGCTTGGCACACCCAAACAAACCCAAGGATC...CGCTAGGTGAGAGGAAAAGCTCTTTACTTCCGCCCCTGGCAGGGACTTCTGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
CDS-3UTR CAA 90 bp TCCTTGGGTTTGTTTGGGTGTGCCAAGCGTGAAGTGGCAGTGACCGGAGACCCAGATCCTTGGGTTTGTTaGGGTGTGCCAAGCGTGAAG +
Preference number: 5 (lower is better)
Translates to: SLGLFGCAKREVAVTGDPDPWVC*GVPSVK
Trigger: CTTCACGCTTGGCACACCCAAACAAACCCAAGGATC...TGGGTCTCCGGTCACTGCCACTTCACGCTTGGCACACCCAAACAAACCCAAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566925.5
CDS-3UTR CAA 90 bp CTTGAGTTTCTGGTCTGGCTCCGGGTGGAGCAGTGGCTTCTCTTAGTAGAAGGAAAGGAGATGCTGGATTaGCCTCCCGGTGGGTTCAGG +
Preference number: 5 (lower is better)
Translates to: LEFLVWLRVEQWLLLVEGKEMLD*PPGGFR
Trigger: CCTGAACCCACCGGGAGGCAAATCCAGCATCTCCTT...TCCTTCTACTAAGAGAAGCCACTGCTCCACCCGGAGCCAGACCAGAAACTCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561516.5
ENST00000569765.5
CDS-3UTR CAA 90 bp GTTCCTCTCAAACCTGGACTACACATGAGTGATGGCCAGGGGTGCCCCATTTCAAAGGAGATGCTGGATTaGCCTCCCGGTGGGTTCAGG +
Preference number: 5 (lower is better)
Translates to: VPLKPGLHMSDGQGCPISKEMLD*PPGGFR
Trigger: CCTGAACCCACCGGGAGGCAAATCCAGCATCTCCTT...TGAAATGGGGCACCCCTGGCCATCACTCATGTGTAGTCCAGGTTTGAGAGGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
CDS TCA 90 bp TTTTGGAAAGAGCACCTGGCATACCCGCTGCTGCGCTGTCACGTCTaGATGCAGTCCATACCTTGGGTTTGTTTGGGTGTGCCAAGCGTG +
Preference number: 5 (lower is better)
Translates to: FWKEHLAYPLLRCHV*MQSIPWVCLGVPSV
Trigger: CACGCTTGGCACACCCAAACAAACCCAAGGTATGGACTGCATTCAGACGTGACAGCGCAGCAGCGGGTATGCCAGGTGCTCTTTCCAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567717.1
CDS CCA 90 bp AGAAAAGAACTGTCACTTTTCCTCTGCAAGGTGAAACAGGAAGAGTaGAAGACGGACAAGGGCCCAGCTCGTCTGCGGCACGTTCCGCTC +
Preference number: 5 (lower is better)
Translates to: RKELSLFLCKVKQEE*KTDKGPARLRHVPL
Trigger: GAGCGGAACGTGCCGCAGACGAGCTGGGCCCTTGTCCGTCTTCCACTCTTCCTGTTTCACCTTGCAGAGGAAAAGTGACAGTTCTTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567717.1
CDS-3UTR CAA 90 bp ATGGCTACCCTATCTCTTGAGTTTCTGGTCTGGCTCCGGGTGGAGCAGTGGCTTTACCCCCTGGGGGATTaGTCCTCTTGGGTATGTTCT +
Preference number: 5 (lower is better)
Translates to: MATLSLEFLVWLRVEQWLYPLGD*SSWVCS
Trigger: AGAACATACCCAAGAGGACAAATCCCCCAGGGGGTA...AAGCCACTGCTCCACCCGGAGCCAGACCAGAAACTCAAGAGATAGGGTAGCCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000562684.5
CDS TCA 90 bp TCTGAATGCAGTCCATACCTTGGGTTTGTTTGGGTGTGCCAAGCGTaGAGTGGCAGTGACCGGAGACCCAAAAATGTCGCTGGTCTTCCC +
Preference number: 5 (lower is better)
Translates to: SECSPYLGFVWVCQA*SGSDRRPKNVAGLP
Trigger: GGGAAGACCAGCGACATTTTTGGGTCTCCGGTCACTGCCACTTCACGCTTGGCACACCCAAACAAACCCAAGGTATGGACTGCATTCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567717.1
CDS TCA 90 bp TGGCAAATGTGCAGCGTCTGGTGGACCCCAAGCAGAAGCTTCCAGTaGTACCTCATCATCCAGTTCAGACCGGCTTTCCTTCCTCACCAT +
Preference number: 5 (lower is better)
Translates to: WQMCSVWWTPSRSFQ*YLIIQFRPAFLPHH
Trigger: ATGGTGAGGAAGGAAAGCCGGTCTGAACTGGATGATGAGGTATCACTGGAAGCTTCTGCTTGGGGTCCACCAGACGCTGCACATTTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566691.5
CDS-3UTR CAA 90 bp TGCAAGGGCTGGGAGAATCACAGGGCCCAGTACCGTCACGTCCTATTTCTTCCTGGACTTCCAAAAAGATaGCTCGATTCTCCTCCTGGG +
Preference number: 5 (lower is better)
Translates to: CKGWENHRAQYRHVLFLPGLPKR*LDSPPG
Trigger: CCCAGGAGGAGAATCGAGCAATCTTTTTGGAAGTCC...AGGAAGAAATAGGACGTGACGGTACTGGGCCCTGTGATTCTCCCAGCCCTTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
CDS-3UTR CAA 90 bp CCTCCCAAATGTAAACGACAGCCACACAGCAGGGCTTGCATGCGCAGGAACTCTGGAAGCTGTCTTTGGTaGACAAAGCCTTGTGCAGAC +
Preference number: 5 (lower is better)
Translates to: PPKCKRQPHSRACMRRNSGSCLW*TKPCAD
Trigger: GTCTGCACAAGGCTTTGTCAACCAAAGACAGCTTCC...AGAGTTCCTGCGCATGCAAGCCCTGCTGTGTGGCTGTCGTTTACATTTGGGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
CDS-3UTR CAA 90 bp ATGGCTACCCTATCTCTTGAGTTTCTGGTCTGGCTCCGGGTGGAGCAGTGGCTTGGAAGCTGTCTTTGGTaGACAAAGCCTTGTGCAGAC +
Preference number: 5 (lower is better)
Translates to: MATLSLEFLVWLRVEQWLGSCLW*TKPCAD
Trigger: GTCTGCACAAGGCTTTGTCAACCAAAGACAGCTTCC...AAGCCACTGCTCCACCCGGAGCCAGACCAGAAACTCAAGAGATAGGGTAGCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
CDS-3UTR CAA 90 bp GTCATTCCTAGACATCCAATCAGCTGGCGGGCTGTTGATCCAAGGACCATGCCCCACACAGAGTGTTTCTaGGCTCCAAAGTCTACAGGC +
Preference number: 5 (lower is better)
Translates to: VIPRHPISWRAVDPRTMPHTECF*APKSTG
Trigger: GCCTGTAGACTTTGGAGCCAAGAAACACTCTGTGTG...GGGCATGGTCCTTGGATCAACAGCCCGCCAGCTGATTGGATGTCTAGGAATGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
CDS-3UTR CAA 90 bp ATGGCTACCCTATCTCTTGAGTTTCTGGTCTGGCTCCGGGTGGAGCAGTGGCTTCACACAGAGTGTTTCTaGGCTCCAAAGTCTACAGGC +
Preference number: 5 (lower is better)
Translates to: MATLSLEFLVWLRVEQWLHTECF*APKSTG
Trigger: GCCTGTAGACTTTGGAGCCAAGAAACACTCTGTGTG...AAGCCACTGCTCCACCCGGAGCCAGACCAGAAACTCAAGAGATAGGGTAGCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
CDS-3UTR CAA 90 bp CTACAGGCAATCAAAAGGGGGAAGCTGTCTTTGGTTGACAAAGCCTTGTGCAGAGCCACACAGCAGGGCTaGCATGCGCAGGAACTCTTC +
Preference number: 5 (lower is better)
Translates to: LQAIKRGKLSLVDKALCRATQQG*HAQELF
Trigger: GAAGAGTTCCTGCGCATGCAAGCCCTGCTGTGTGGC...TCTGCACAAGGCTTTGTCAACCAAAGACAGCTTCCCCCTTTTGATTGCCTGTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
CDS CCA 90 bp TTGACTTTCATCTCATCTGGCCCCGATCTAGCAGGCAGAATGGTGTaGAGCCTCCTAGAGAGGAACTCTCAGGCTCACAGTCTGAGAAGT +
Preference number: 5 (lower is better)
Translates to: LTFISSGPDLAGRMV*SLLERNSQAHSLRS
Trigger: ACTTCTCAGACTGTGAGCCTGAGAGTTCCTCTCTAGGAGGCTCCACACCATTCTGCCTGCTAGATCGGGGCCAGATGAGATGAAAGTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562569.1
CDS CCA 90 bp AAAAACATGTCGCATCTGCCTTGGAGCCTTTTTGGAAAGAGCACCTaGCATACCCGCTGCTGCGCTGTCACGTCTGAATGCAGTCCATAC +
Preference number: 5 (lower is better)
Translates to: KNMSHLPWSLFGKST*HTRCCAVTSECSPY
Trigger: GTATGGACTGCATTCAGACGTGACAGCGCAGCAGCGGGTATGCCAGGTGCTCTTTCCAAAAAGGCTCCAAGGCAGATGCGACATGTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000567717.1
CDS-3UTR CAA 90 bp TCTCAAGCGTTGACTTTCATCTCATCTGGCCCCGATCTAGCAGGCAGAATGGTGTACCCCCTGGGGGATTaGTCCTCTTGGGTATGTTCT +
Preference number: 5 (lower is better)
Translates to: SQALTFISSGPDLAGRMVYPLGD*SSWVCS
Trigger: AGAACATACCCAAGAGGACAAATCCCCCAGGGGGTA...CACCATTCTGCCTGCTAGATCGGGGCCAGATGAGATGAAAGTCAACGCTTGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000562569.1
CDS-3UTR CAA 90 bp CTTTCAGTCATTCCTAGACATCCAATCAGCTGGCGGGCTGTTGATCCAAGGACCGAGTCTGCACGGGGGTaGATTCGTCAAAGATACCAC +
Preference number: 5 (lower is better)
Translates to: LSVIPRHPISWRAVDPRTESARG*IRQRYH
Trigger: GTGGTATCTTTGACGAATCAACCCCCGTGCAGACTC...GGTCCTTGGATCAACAGCCCGCCAGCTGATTGGATGTCTAGGAATGACTGAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
CDS-3UTR CAA 90 bp AAGCACAAACCACCTGAAGTGTGTGTAGAGTCACACAGAGTGTTTCTTGGCTCCAAGGAGATGCTGGATTaGCCTCCCGGTGGGTTCAGG +
Preference number: 5 (lower is better)
Translates to: KHKPPEVCVESHRVFLGSKEMLD*PPGGFR
Trigger: CCTGAACCCACCGGGAGGCAAATCCAGCATCTCCTT...GGAGCCAAGAAACACTCTGTGTGACTCTACACACACTTCAGGTGGTTTGTGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
CDS-3UTR CAA 90 bp CCCCTTCCAGTTCCTCTCAAACCTGGACTACACATGAGTGATGGCCAGGGGTGCAGTGGACAGGCTGTTTaGGTTTCTTTCAGTCATTCC +
Preference number: 5 (lower is better)
Translates to: PLPVPLKPGLHMSDGQGCSGQAV*VSFSHS
Trigger: GGAATGACTGAAAGAAACCAAAACAGCCTGTCCACT...GCACCCCTGGCCATCACTCATGTGTAGTCCAGGTTTGAGAGGAACTGGAAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248098.8
ENST00000561516.5
ENST00000562684.5
CDS-3UTR CAA 90 bp GCTACCCTATCTCTTGAGTTTCTGGTCTGGCTCCGGGTGGAGCAGTGGCTTCTCAGTGGACAGGCTGTTTaGGTTTCTTTCAGTCATTCC +
Preference number: 5 (lower is better)
Translates to: ATLSLEFLVWLRVEQWLLSGQAV*VSFSHS
Trigger: GGAATGACTGAAAGAAACCAAAACAGCCTGTCCACT...GAGAAGCCACTGCTCCACCCGGAGCCAGACCAGAAACTCAAGAGATAGGGTAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248098.8
ENST00000561516.5
ENST00000562684.5
CDS-3UTR CAA 90 bp CTTCCAGTTCCTCTCAAACCTGGACTACACATGAGTGATGGCCAGGGGTGCCCCAGTGGACAGGCTGTTTaGGTTTCTTTCAGTCATTCC +
Preference number: 5 (lower is better)
Translates to: LPVPLKPGLHMSDGQGCPSGQAV*VSFSHS
Trigger: GGAATGACTGAAAGAAACCAAAACAGCCTGTCCACT...GGGGCACCCCTGGCCATCACTCATGTGTAGTCCAGGTTTGAGAGGAACTGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248098.8
ENST00000561516.5
ENST00000562684.5
CDS-3UTR CAA 90 bp GGCTCACATAAGACTAACCCTCTTCCCACCCCGCTCATTTGGGCAAAAGGAAATTTGGTTGACAAAGCCTaGTGCAGACCCCAGTGTGCC +
Preference number: 5 (lower is better)
Translates to: GSHKTNPLPTPLIWAKGNLVDKA*CRPQCA
Trigger: GGCACACTGGGGTCTGCACAAGGCTTTGTCAACCAA...ATTTCCTTTTGCCCAAATGAGCGGGGTGGGAAGAGGGTTAGTCTTATGTGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
CDS-3UTR CAA 90 bp GCTCACATAAGACTAACCCTCTTCCCACCCCGCTCATTTGGGCAAAAGGAAATGTTGGTTGACAAAGCCTaGTGCAGACCCCAGTGTGCC +
Preference number: 5 (lower is better)
Translates to: AHIRLTLFPPRSFGQKEMLVDKA*CRPQCA
Trigger: GGCACACTGGGGTCTGCACAAGGCTTTGTCAACCAA...CATTTCCTTTTGCCCAAATGAGCGGGGTGGGAAGAGGGTTAGTCTTATGTGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
CDS-3UTR CAA 90 bp CACATAAGACTAACCCTCTTCCCACCCCGCTCATTTGGGCAAAAGGAAATGAAAGCCACACAGCAGGGCTaGCATGCGCAGGAACTCTTC +
Preference number: 5 (lower is better)
Translates to: HIRLTLFPPRSFGQKEMKATQQG*HAQELF
Trigger: GAAGAGTTCCTGCGCATGCAAGCCCTGCTGTGTGGC...TTTCATTTCCTTTTGCCCAAATGAGCGGGGTGGGAAGAGGGTTAGTCTTATGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
CDS-3UTR CAA 90 bp GCTCACATAAGACTAACCCTCTTCCCACCCCGCTCATTTGGGCAAAAGGAAATGCTCCTCACCTATGCATaGCAAGCCAGGTCAGAGGCA +
Preference number: 5 (lower is better)
Translates to: AHIRLTLFPPRSFGQKEMLLTYA*QARSEA
Trigger: TGCCTCTGACCTGGCTTGCAATGCATAGGTGAGGAG...CATTTCCTTTTGCCCAAATGAGCGGGGTGGGAAGAGGGTTAGTCTTATGTGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000248098.8
CDS-3UTR CAA 90 bp GCTCACATAAGACTAACCCTCTTCCCACCCCGCTCATTTGGGCAAAAGGAAATGCCCTTTCTCAACACCTaGTCCAGAAACCAGTCCCCC +
Preference number: 5 (lower is better)
Translates to: AHIRLTLFPPRSFGQKEMPFLNT*SRNQSP
Trigger: GGGGGACTGGTTTCTGGACAAGGTGTTGAGAAAGGG...CATTTCCTTTTGCCCAAATGAGCGGGGTGGGAAGAGGGTTAGTCTTATGTGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382710.8
CDS-3UTR CAA 90 bp GTCATTCCTAGACATCCAATCAGCTGGCGGGCTGTTGATCCAAGGACCATGCCCATGATCCTGGGGGATTaGTCCTCTTGGGTATGTTCT +
Preference number: 5 (lower is better)
Translates to: VIPRHPISWRAVDPRTMPMILGD*SSWVCS
Trigger: AGAACATACCCAAGAGGACAAATCCCCCAGGATCAT...GGGCATGGTCCTTGGATCAACAGCCCGCCAGCTGATTGGATGTCTAGGAATGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561516.5
CDS-3UTR CAA 90 bp CTTTCTCAAGCGTTGACTTTCATCTCATCTGGCCCCGATCTAGCAGGCAGAATGGAGTCTGCACGGGGGTaGATTCGTCAAAGATACCAC +
Preference number: 5 (lower is better)
Translates to: LSQALTFISSGPDLAGRMESARG*IRQRYH
Trigger: GTGGTATCTTTGACGAATCAACCCCCGTGCAGACTC...CATTCTGCCTGCTAGATCGGGGCCAGATGAGATGAAAGTCAACGCTTGAGAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562569.1
CDS-3UTR CAA 90 bp CTTTCTCAAGCGTTGACTTTCATCTCATCTGGCCCCGATCTAGCAGGCAGAATGGATCCTTGGGTTTGTTaGGGTGTGCCAAGCGTGAAG +
Preference number: 5 (lower is better)
Translates to: LSQALTFISSGPDLAGRMDPWVC*GVPSVK
Trigger: CTTCACGCTTGGCACACCCAAACAAACCCAAGGATC...CATTCTGCCTGCTAGATCGGGGCCAGATGAGATGAAAGTCAACGCTTGAGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562569.1
CDS-3UTR CAA 90 bp GCTCACATAAGACTAACCCTCTTCCCACCCCGCTCATTTGGGCAAAAGGAAATGGATCCTTGGGTTTGTTaGGGTGTGCCAAGCGTGAAG +
Preference number: 5 (lower is better)
Translates to: AHIRLTLFPPRSFGQKEMDPWVC*GVPSVK
Trigger: CTTCACGCTTGGCACACCCAAACAAACCCAAGGATC...CATTTCCTTTTGCCCAAATGAGCGGGGTGGGAAGAGGGTTAGTCTTATGTGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000562684.5
CDS-3UTR CAA 90 bp ATGCTGGATTTAGCAGCCGTGATCTCCAGAATGGAAGCGGTTCTGCTAAGAGGTTGGCTACCCTATCTCTaGAGTTTCTGGTCTGGCTCC +
Preference number: 5 (lower is better)
Translates to: MLDLAAVISRMEAVLLRGWLPYL*SFWSGS
Trigger: GGAGCCAGACCAGAAACTCAAGAGATAGGGTAGCCA...ACCTCTTAGCAGAACCGCTTCCATTCTGGAGATCACGGCTGCTAAATCCAGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248098.8
ENST00000561516.5
ENST00000562684.5
CDS-3UTR CAA 90 bp GGCTCACATAAGACTAACCCTCTTCCCACCCCGCTCATTTGGGCAAAAGGAAATTGGCTACCCTATCTCTaGAGTTTCTGGTCTGGCTCC +
Preference number: 5 (lower is better)
Translates to: GSHKTNPLPTPLIWAKGNWLPYL*SFWSGS
Trigger: GGAGCCAGACCAGAAACTCAAGAGATAGGGTAGCCA...ATTTCCTTTTGCCCAAATGAGCGGGGTGGGAAGAGGGTTAGTCTTATGTGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
CDS-3UTR CAA 90 bp ATGCTGGATTTAGCAGCCGTGATCTCCAGAATGGAAGCGGTTCTGCTAAGAGGTAGGGGGAAGCTGTCTTaGGTTGACAAAGCCTTGTGC +
Preference number: 5 (lower is better)
Translates to: MLDLAAVISRMEAVLLRGRGKLS*VDKALC
Trigger: GCACAAGGCTTTGTCAACCAAAGACAGCTTCCCCCT...ACCTCTTAGCAGAACCGCTTCCATTCTGGAGATCACGGCTGCTAAATCCAGCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
CDS-3UTR CAA 90 bp GGCTCACATAAGACTAACCCTCTTCCCACCCCGCTCATTTGGGCAAAAGGAAATGGACTTCCAAAAAGATaGCTCGATTCTCCTCCTGGG +
Preference number: 5 (lower is better)
Translates to: GSHKTNPLPTPLIWAKGNGLPKR*LDSPPG
Trigger: CCCAGGAGGAGAATCGAGCAATCTTTTTGGAAGTCC...ATTTCCTTTTGCCCAAATGAGCGGGGTGGGAAGAGGGTTAGTCTTATGTGAGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
CDS-3UTR CAA 90 bp GCTCACATAAGACTAACCCTCTTCCCACCCCGCTCATTTGGGCAAAAGGAAATGGGACTTCCAAAAAGATaGCTCGATTCTCCTCCTGGG +
Preference number: 5 (lower is better)
Translates to: AHIRLTLFPPRSFGQKEMGLPKR*LDSPPG
Trigger: CCCAGGAGGAGAATCGAGCAATCTTTTTGGAAGTCC...CATTTCCTTTTGCCCAAATGAGCGGGGTGGGAAGAGGGTTAGTCTTATGTGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000561516.5
ENST00000562684.5
ENST00000569765.5
CDS-3UTR CAA 90 bp ATGCTGGATTTAGCAGCCGTGATCTCCAGAATGGAAGCGGTTCTGCTAAGAGGTGGACTTCCAAAAAGATaGCTCGATTCTCCTCCTGGG +
Preference number: 5 (lower is better)
Translates to: MLDLAAVISRMEAVLLRGGLPKR*LDSPPG
Trigger: CCCAGGAGGAGAATCGAGCAATCTTTTTGGAAGTCC...ACCTCTTAGCAGAACCGCTTCCATTCTGGAGATCACGGCTGCTAAATCCAGCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000248098.8
ENST00000561516.5
ENST00000562684.5
CDS-3UTR CAA 90 bp TTGATTCGTCAAAGATACCACTTCCTTTACCCCCTGGGGGATTTGTCCTCTTGGGAGTCTGCACGGGGGTaGATTCGTCAAAGATACCAC +
Preference number: 5 (lower is better)
Translates to: LIRQRYHFLYPLGDLSSWESARG*IRQRYH
Trigger: GTGGTATCTTTGACGAATCAACCCCCGTGCAGACTC...CCAAGAGGACAAATCCCCCAGGGGGTAAAGGAAGTGGTATCTTTGACGAATCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000566925.5
CDS CCA 90 bp ATTAGATGCCATCCTATTAGGCCTGCTGGAAGGAGTAGCTTCTTCTaGACTTCCAAAAAGATTGCTCGATTCTCCTCCTGGGGGCTTCAT +
Preference number: 5 (lower is better)
Translates to: IRCHPIRPAGRSSFF*TSKKIARFSSWGLH
Trigger: ATGAAGCCCCCAGGAGGAGAATCGAGCAATCTTTTTGGAAGTCCAGAAGAAGCTACTCCTTCCAGCAGGCCTAATAGGATGGCATCTAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 11 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000561516.5
ENST00000562684.5
ENST00000565851.5
ENST00000566691.5
ENST00000566742.5
ENST00000566925.5
ENST00000567717.1
ENST00000569765.5
CDS CCA 90 bp CCCTGGGGGATTTGTCCTCTTGGGTATGTTCTGAGGTTCTTCTGTTaGTCCAAAAATATTAGATGCCATCCTATTAGGCCTGCTGGAAGG +
Preference number: 5 (lower is better)
Translates to: PWGICPLGYVLRFFC*SKNIRCHPIRPAGR
Trigger: CCTTCCAGCAGGCCTAATAGGATGGCATCTAATATTTTTGGACCAACAGAAGAACCTCAGAACATACCCAAGAGGACAAATCCCCCAGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 11 transcripts:
ENST00000248098.8
ENST00000382710.8
ENST00000382711.9
ENST00000562569.1
ENST00000562684.5
ENST00000565851.5
ENST00000566691.5
ENST00000566742.5
ENST00000566925.5
ENST00000567717.1
ENST00000568376.1
CDS CCA 90 bp AGTAGCTTCTTCTGGACTTCCAAAAAGATTGCTCGATTCTCCTCCTaGGGGCTTCATGGCCCTACAAGCACAGAGTACATGCCAATTACT +
Preference number: 5 (lower is better)
Translates to: SSFFWTSKKIARFSS*GLHGPTSTEYMPIT
Trigger: AGTAATTGGCATGTACTCTGTGCTTGTAGGGCCATGAAGCCCCCAGGAGGAGAATCGAGCAATCTTTTTGGAAGTCCAGAAGAAGCTACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565851.5
CDS-3UTR CAA 90 bp CTACAGGCAATCAAAAGGGGGAAGCTGTCTTTGGTTGACAAAGCCTTGTGCAGATGGACAGGTGTGACTTaGCTACTGAACTCCTTCATC +
Preference number: 5 (lower is better)
Translates to: LQAIKRGKLSLVDKALCRWTGVT*LLNSFI
Trigger: GATGAAGGAGTTCAGTAGCAAAGTCACACCTGTCCA...TCTGCACAAGGCTTTGTCAACCAAAGACAGCTTCCCCCTTTTGATTGCCTGTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
CDS-3UTR CAA 90 bp CTTTCAGTCATTCCTAGACATCCAATCAGCTGGCGGGCTGTTGATCCAAGGACCGTTGCATCAATGACTTaGAAGCACAAACCACCTGAA +
Preference number: 5 (lower is better)
Translates to: LSVIPRHPISWRAVDPRTVASMT*KHKPPE
Trigger: TTCAGGTGGTTTGTGCTTCAAAGTCATTGATGCAAC...GGTCCTTGGATCAACAGCCCGCCAGCTGATTGGATGTCTAGGAATGACTGAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
CDS TCA 90 bp TCGATGACTAATGCTTGCATCCAGGATAATCTACGGCACCCACCATaGTTCTCCCTAAAAACATGTCGCATCTGCCTTGGAGCCTTTTTG +
Preference number: 5 (lower is better)
Translates to: SMTNACIQDNLRHPP*FSLKTCRICLGAFL
Trigger: CAAAAAGGCTCCAAGGCAGATGCGACATGTTTTTAGGGAGAATCATGGTGGGTGCCGTAGATTATCCTGGATGCAAGCATTAGTCATCGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000567717.1
CDS CCA 90 bp TCCTGGGGGATTTGTCCTCTTGGGTATGTTCTGAGGTTCTTCTGTTaGTCCAAAAATATTAGATGCCATCCTATTAGGCCTGCTGGAAGG +
Preference number: 5 (lower is better)
Translates to: SWGICPLGYVLRFFC*SKNIRCHPIRPAGR
Trigger: CCTTCCAGCAGGCCTAATAGGATGGCATCTAATATTTTTGGACCAACAGAAGAACCTCAGAACATACCCAAGAGGACAAATCCCCCAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000561516.5
ENST00000569765.5
CDS-3UTR CAA 90 bp CAAAGTCTACAGGCAATCAAAAGGGGGAAGCTGTCTTTGGTTGACAAAGCCTTGTGGACAGGTGTGACTTaGCTACTGAACTCCTTCATC +
Preference number: 5 (lower is better)
Translates to: QSLQAIKRGKLSLVDKALWTGVT*LLNSFI
Trigger: GATGAAGGAGTTCAGTAGCAAAGTCACACCTGTCCA...CAAGGCTTTGTCAACCAAAGACAGCTTCCCCCTTTTGATTGCCTGTAGACTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
CDS-3UTR CAA 90 bp CTACAGGCAATCAAAAGGGGGAAGCTGTCTTTGGTTGACAAAGCCTTGTGCAGAGTTGCATCAATGACTTaGAAGCACAAACCACCTGAA +
Preference number: 5 (lower is better)
Translates to: LQAIKRGKLSLVDKALCRVASMT*KHKPPE
Trigger: TTCAGGTGGTTTGTGCTTCAAAGTCATTGATGCAAC...TCTGCACAAGGCTTTGTCAACCAAAGACAGCTTCCCCCTTTTGATTGCCTGTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
CDS-3UTR CAA 90 bp ATCTCCAGAATGGAAGCGGTTCTGCTAAGAGGTCAATATACTGTTAGTGTTTCTGCAAAGCTCAGGGAATaGGACAGGTGTGACTTTGCT +
Preference number: 5 (lower is better)
Translates to: ISRMEAVLLRGQYTVSVSAKLRE*DRCDFA
Trigger: AGCAAAGTCACACCTGTCCAATTCCCTGAGCTTTGC...AGAAACACTAACAGTATATTGACCTCTTAGCAGAACCGCTTCCATTCTGGAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248098.8
ENST00000562684.5
CDS-3UTR CAA 90 bp CAAAGTCTACAGGCAATCAAAAGGGGGAAGCTGTCTTTGGTTGACAAAGCCTTGACTCTACTCAAAGCTTaGAGAAGACTAATTTTGGCA +
Preference number: 5 (lower is better)
Translates to: QSLQAIKRGKLSLVDKALTLLKA*RRLILA
Trigger: TGCCAAAATTAGTCTTCTCAAAGCTTTGAGTAGAGT...CAAGGCTTTGTCAACCAAAGACAGCTTCCCCCTTTTGATTGCCTGTAGACTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000248098.8
CDS CCA 72 bp CTGGAGCCGGCGCGGCCGCCCTCGCTATCCGGGACCTaGAACATGTCGACCGCCGCCACCCTCAGCTCGCCG +
Preference number: 6 (lower is better)
Translates to: LEPARPPSLSGT*NMSTAATLSSP
Trigger: CGGCGAGCTGAGGGTGGCGGCGGTCGACATGTTCCAGGTCCCGGATAGCGAGGGCGGCCGCGCCGGCTCCAG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000248098.8
ENST00000561516.5
ENST00000562684.5
ENST00000567717.1
ENST00000569256.5
CDS TCA 72 bp CTCCCCACCGCTTCTCCGCGCCCCGCAGCACTGCAGTaGGGAGCCGCCACAGCCCGTCTGCAGTGGGCGTCC +
Preference number: 6 (lower is better)
Translates to: LPTASPRPAALQ*GAATARLQWAS
Trigger: GGACGCCCACTGCAGACGGGCTGTGGCGGCTCCTCACTGCAGTGCTGCGGGGCGCGGAGAAGCGGTGGGGAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567717.1
CDS GCA 72 bp TTCCGCTCCCCACCGCTTCTCCGCGCCCCGCAGCACTaGAGTGAGGAGCCGCCACAGCCCGTCTGCAGTGGG +
Preference number: 6 (lower is better)
Translates to: FRSPPLLRAPQH*SEEPPQPVCSG
Trigger: CCCACTGCAGACGGGCTGTGGCGGCTCCTCACTGCAGTGCTGCGGGGCGCGGAGAAGCGGTGGGGAGCGGAA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567717.1
CDS GCA 72 bp AGGAAGAGTGGAAGACGGACAAGGGCCCAGCTCGTCTaGGGCACGTTCCGCTCCCCACCGCTTCTCCGCGCC +
Preference number: 6 (lower is better)
Translates to: RKSGRRTRAQLV*GTFRSPPLLRA
Trigger: GGCGCGGAGAAGCGGTGGGGAGCGGAACGTGCCGCAGACGAGCTGGGCCCTTGTCCGTCTTCCACTCTTCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567717.1
CDS TCA 72 bp TGGCCCCCAGAAACCAAGCGTGTGCTGGCCGACCTCTaGAGTGGTGCCCAGGGCCCCTGTCCACTCAGGAGG +
Preference number: 6 (lower is better)
Translates to: WPPETKRVLADL*SGAQGPCPLRR
Trigger: CCTCCTGAGTGGACAGGGGCCCTGGGCACCACTTCAGAGGTCGGCCAGCACACGCTTGGTTTCTGGGGGCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566925.5
CDS TCA 72 bp CCAAGGCGCCCGCCCTGCGACTCGACCCCGTTCAGATaGGTGGCAAATGTGCAGCGTCTGGTGGACCCCAAG +
Preference number: 6 (lower is better)
Translates to: PRRPPCDSTPFR*VANVQRLVDPK
Trigger: CTTGGGGTCCACCAGACGCTGCACATTTGCCACTCATCTGAACGGGGTCGAGTCGCAGGGCGGGCGCCTTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566691.5
CDS CCA 72 bp GGCGCCCGCCCTGCGACTCGACCCCGTTCAGATGAGTaGCAAATGTGCAGCGTCTGGTGGACCCCAAGCAGA +
Preference number: 6 (lower is better)
Translates to: GARPATRPRSDE*QMCSVWWTPSR
Trigger: TCTGCTTGGGGTCCACCAGACGCTGCACATTTGCCACTCATCTGAACGGGGTCGAGTCGCAGGGCGGGCGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566691.5
CDS GCA 72 bp GGGCCCCTGTCCACTCAGGAGGCTGGGGGAGGTGGATaGCAAACTTCCTGTCAGCAGTTGCCATTTCCTGGA +
Preference number: 6 (lower is better)
Translates to: GPLSTQEAGGGG*QTSCQQLPFPG
Trigger: TCCAGGAAATGGCAACTGCTGACAGGAAGTTTGGCATCCACCTCCCCCAGCCTCCTGAGTGGACAGGGGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000382711.9
ENST00000562684.5
ENST00000566925.5
ENST00000569765.5
CDS GCA 72 bp CCTGCGACTCGACCCCGTTCAGATGAGTGGCAAATGTaGAGCGTCTGGTGGACCCCAAGCAGAAGCTTCCAG +
Preference number: 6 (lower is better)
Translates to: PATRPRSDEWQM*SVWWTPSRSFQ
Trigger: CTGGAAGCTTCTGCTTGGGGTCCACCAGACGCTGCACATTTGCCACTCATCTGAACGGGGTCGAGTCGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566691.5
CDS CAA 90 bp CCCGCTGCTGCGCTGTCACGTCTGAATGCAGTCCATACCTTGGGTTaGTTTGGGTGTGCCAAGCGTGAAGTGGCAGTGACCGGAGACCCA +
Preference number: 6 (lower is better)
Translates to: PAAALSRLNAVHTLG*FGCAKREVAVTGDP
Trigger: TGGGTCTCCGGTCACTGCCACTTCACGCTTGGCACACCCAAACAAACCCAAGGTATGGACTGCATTCAGACGTGACAGCGCAGCAGCGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567717.1
CDS CAA 90 bp GGCATACCCGCTGCTGCGCTGTCACGTCTGAATGCAGTCCATACCTaGGGTTTGTTTGGGTGTGCCAAGCGTGAAGTGGCAGTGACCGGA +
Preference number: 6 (lower is better)
Translates to: GIPAAALSRLNAVHT*GLFGCAKREVAVTG
Trigger: TCCGGTCACTGCCACTTCACGCTTGGCACACCCAAACAAACCCAAGGTATGGACTGCATTCAGACGTGACAGCGCAGCAGCGGGTATGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567717.1
CDS CCA 72 bp TTCTGGACTTCCAAAAAGATTGCTCGATTCTCCTCCTaGGGGCTTCATGGCCAAGGCGCCCGCCCTGCGACT +
Preference number: 6 (lower is better)
Translates to: FWTSKKIARFSS*GLHGQGARPAT
Trigger: AGTCGCAGGGCGGGCGCCTTGGCCATGAAGCCCCCAGGAGGAGAATCGAGCAATCTTTTTGGAAGTCCAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566691.5
CDS TCA 72 bp GAGCACCTGGCATACCCGCTGCTGCGCTGTCACGTCTaGATGCAGTCCATACCTTGGGTTTGTTTGGGTGTG +
Preference number: 6 (lower is better)
Translates to: EHLAYPLLRCHV*MQSIPWVCLGV
Trigger: CACACCCAAACAAACCCAAGGTATGGACTGCATTCAGACGTGACAGCGCAGCAGCGGGTATGCCAGGTGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567717.1
CDS CCA 72 bp TCGCATCTGCCTTGGAGCCTTTTTGGAAAGAGCACCTaGCATACCCGCTGCTGCGCTGTCACGTCTGAATGC +
Preference number: 6 (lower is better)
Translates to: SHLPWSLFGKST*HTRCCAVTSEC
Trigger: GCATTCAGACGTGACAGCGCAGCAGCGGGTATGCCAGGTGCTCTTTCCAAAAAGGCTCCAAGGCAGATGCGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567717.1
CDS CCA 72 bp GAAGAGCTTCCCCCACGGCTTCAGTCAGCACAAGGCTaGACTGTTTCCTGGGTGACTCAGGGGAACTTCCAA +
Preference number: 6 (lower is better)
Translates to: EELPPRLQSAQG*TVSWVTQGNFQ
Trigger: TTGGAAGTTCCCCTGAGTCACCCAGGAAACAGTCCAGCCTTGTGCTGACTGAAGCCGTGGGGGAAGCTCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567717.1
CDS GCA 72 bp ACCTGGCATACCCGCTGCTGCGCTGTCACGTCTGAATaGAGTCCATACCTTGGGTTTGTTTGGGTGTGCCAA +
Preference number: 6 (lower is better)
Translates to: TWHTRCCAVTSE*SPYLGFVWVCQ
Trigger: TTGGCACACCCAAACAAACCCAAGGTATGGACTGCATTCAGACGTGACAGCGCAGCAGCGGGTATGCCAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567717.1
CDS CCA 72 bp ATCTCATCTGGCCCCGATCTAGCAGGCAGAATGGTGTaGAGCCTCCTAGAGAGGAACTCTCAGGCTCACAGT +
Preference number: 6 (lower is better)
Translates to: ISSGPDLAGRMV*SLLERNSQAHS
Trigger: ACTGTGAGCCTGAGAGTTCCTCTCTAGGAGGCTCCACACCATTCTGCCTGCTAGATCGGGGCCAGATGAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562569.1
CDS CAA 72 bp GCGCTGTCACGTCTGAATGCAGTCCATACCTTGGGTTaGTTTGGGTGTGCCAAGCGTGAAGTGGCAGTGACC +
Preference number: 6 (lower is better)
Translates to: ALSRLNAVHTLG*FGCAKREVAVT
Trigger: GGTCACTGCCACTTCACGCTTGGCACACCCAAACAAACCCAAGGTATGGACTGCATTCAGACGTGACAGCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567717.1
CDS CAA 72 bp GCTGCTGCGCTGTCACGTCTGAATGCAGTCCATACCTaGGGTTTGTTTGGGTGTGCCAAGCGTGAAGTGGCA +
Preference number: 6 (lower is better)
Translates to: AAALSRLNAVHT*GLFGCAKREVA
Trigger: TGCCACTTCACGCTTGGCACACCCAAACAAACCCAAGGTATGGACTGCATTCAGACGTGACAGCGCAGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567717.1
CDS TCA 72 bp AGGAACTCTCAGGCTCACAGTCTGAGAAGTTTACCCTaGATCCACATAATGCCTGGCTCTGCTCCAGCCGGG +
Preference number: 6 (lower is better)
Translates to: RNSQAHSLRSLP*IHIMPGSAPAG
Trigger: CCCGGCTGGAGCAGAGCCAGGCATTATGTGGATTCAGGGTAAACTTCTCAGACTGTGAGCCTGAGAGTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562569.1
CDS TCA 72 bp TGCAGCGTCTGGTGGACCCCAAGCAGAAGCTTCCAGTaGTACCTCATCATCCAGTTCAGACCGGCTTTCCTT +
Preference number: 6 (lower is better)
Translates to: CSVWWTPSRSFQ*YLIIQFRPAFL
Trigger: AAGGAAAGCCGGTCTGAACTGGATGATGAGGTATCACTGGAAGCTTCTGCTTGGGGTCCACCAGACGCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566691.5
CDS TCA 72 bp AGTCCATACCTTGGGTTTGTTTGGGTGTGCCAAGCGTaGAGTGGCAGTGACCGGAGACCCAAAAATGTCGCT +
Preference number: 6 (lower is better)
Translates to: SPYLGFVWVCQA*SGSDRRPKNVA
Trigger: AGCGACATTTTTGGGTCTCCGGTCACTGCCACTTCACGCTTGGCACACCCAAACAAACCCAAGGTATGGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567717.1
CDS GCA 72 bp CCTGGGGGCTTCATGGCCCTACAAGCACAGAGTACATaGCAATTACTGATGGCAGACCTGAAAGCTTGTCAC +
Preference number: 6 (lower is better)
Translates to: PGGFMALQAQST*QLLMADLKACH
Trigger: GTGACAAGCTTTCAGGTCTGCCATCAGTAATTGGCATGTACTCTGTGCTTGTAGGGCCATGAAGCCCCCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565851.5
CDS CCA 72 bp TTCTGGACTTCCAAAAAGATTGCTCGATTCTCCTCCTaGGGGCTTCATGGCCCTCATCATCCAGTTCAGACC +
Preference number: 6 (lower is better)
Translates to: FWTSKKIARFSS*GLHGPHHPVQT
Trigger: GGTCTGAACTGGATGATGAGGGCCATGAAGCCCCCAGGAGGAGAATCGAGCAATCTTTTTGGAAGTCCAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382710.8
CDS TCA 72 bp GTTTCCTGGGTGACTCAGGGGAACTTCCAAACTCGATaGCTAATGCTTGCATCCAGGATAATCTACGGCACC +
Preference number: 6 (lower is better)
Translates to: VSWVTQGNFQTR*LMLASRIIYGT
Trigger: GGTGCCGTAGATTATCCTGGATGCAAGCATTAGTCATCGAGTTTGGAAGTTCCCCTGAGTCACCCAGGAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567717.1
CDS CCA 72 bp TTCTGGACTTCCAAAAAGATTGCTCGATTCTCCTCCTaGGGGCTTCATGGCCCTACAAGCACAGAGTACATG +
Preference number: 6 (lower is better)
Translates to: FWTSKKIARFSS*GLHGPTSTEYM
Trigger: CATGTACTCTGTGCTTGTAGGGCCATGAAGCCCCCAGGAGGAGAATCGAGCAATCTTTTTGGAAGTCCAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565851.5
CDS TCA 72 bp AATGCTTGCATCCAGGATAATCTACGGCACCCACCATaGTTCTCCCTAAAAACATGTCGCATCTGCCTTGGA +
Preference number: 6 (lower is better)
Translates to: NACIQDNLRHPP*FSLKTCRICLG
Trigger: TCCAAGGCAGATGCGACATGTTTTTAGGGAGAATCATGGTGGGTGCCGTAGATTATCCTGGATGCAAGCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567717.1