RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for JPT1 (Homo sapiens)

Ensembl gene IDs: ENSG00000189159

Ensembl transcript IDs: ENST00000304834.11, ENST00000356033.8, ENST00000409753.8, ENST00000465454.1, ENST00000470924.5, ENST00000476258.5, ENST00000482348.5, ENST00000581874.1

Found 271 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GAGGCGCAGGCCTCTTCATTGTTCACATGTCACAGGAGGAGGCTCTaGGCAAAGGCCACTGGCAAGTTAGGGCAACACCAAGAAGGCTCT +
Preference number: 1 (lower is better)
Translates to: EAQASSLFTCHRRRL*AKATGKLGQHQEGS
Trigger: AGAGCCTTCTTGGTGTTGCCCTAACTTGCCAGTGGCCTTTGCTCAGAGCCTCCTCCTGTGACATGTGAACAATGAAGAGGCCTGCGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
3UTR GCA 90 bp GCCTGTGGGACCCCGTTCCTGGAGGAAGACCCGCTTCAGTGTGATTaGCTCCCTTGCTTCACTGCTTTTAGTTCCAGGCAGTTTCATTGT +
Preference number: 1 (lower is better)
Translates to: ACGTPFLEEDPLQCD*LPCFTAFSSRQFHC
Trigger: ACAATGAAACTGCCTGGAACTAAAAGCAGTGAAGCAAGGGAGGCAATCACACTGAAGCGGGTCTTCCTCCAGGAACGGGGTCCCACAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
3UTR GCA 90 bp ACCCCGTTCCTGGAGGAAGACCCGCTTCAGTGTGATTGCCTCCCTTaGTTCACTGCTTTTAGTTCCAGGCAGTTTCATTGTACATCCAAG +
Preference number: 1 (lower is better)
Translates to: TPFLEEDPLQCDCLP*FTAFSSRQFHCTSK
Trigger: CTTGGATGTACAATGAAACTGCCTGGAACTAAAAGCAGTGAAGCAAGGGAGGCAATCACACTGAAGCGGGTCTTCCTCCAGGAACGGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
3UTR TCA 90 bp GCCTGGCAGGAACGGTGCCTGTGGACTGTTTATGGTCTGTCCAGTTaGGGCTTGGTAAACCCAAGTAAAGTGTTAAAAACCTCAGTACAA +
Preference number: 1 (lower is better)
Translates to: AWQERCLWTVYGLSS*GLVNPSKVLKTSVQ
Trigger: TTGTACTGAGGTTTTTAACACTTTACTTGGGTTTACCAAGCCTCAACTGGACAGACCATAAACAGTCCACAGGCACCGTTCCTGCCAGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
3UTR GCA 90 bp AGTGTCACAAAGCTTTCCCTCCAATCTACTACTAGAAAACACTCATaGCATGGCCCACAGACCCAAGAGTCAAGGACAGAGAGAAACCTG +
Preference number: 1 (lower is better)
Translates to: SVTKLSLQSTTRKHS*HGPQTQESRTERNL
Trigger: CAGGTTTCTCTCTGTCCTTGACTCTTGGGTCTGTGGGCCATGGCATGAGTGTTTTCTAGTAGTAGATTGGAGGGAAAGCTTTGTGACACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
3UTR-3UTR CCA 90 bp GTTAGGGCAACACCAAGAAGGCTCTGCGGAGAGACTCCCTGTGGGTTGGGGCCTAACCCAAGACGAGGCTaGACTTGCCGCCAGGGGGAT +
Preference number: 2 (lower is better)
Translates to: VRATPRRLCGETPCGLGPNPRRG*TCRQGD
Trigger: ATCCCCCTGGCGGCAAGTCCAGCCTCGTCTTGGGTT...AGGCCCCAACCCACAGGGAGTCTCTCCGCAGAGCCTTCTTGGTGTTGCCCTAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304834.11
3UTR-3UTR GCA 90 bp GGCAAGTTAGGGCAACACCAAGAAGGCTCTGCGGAGAGACTCCCTGTGGGTTGGGAAGTCTCCGGAGCTTaGTTCAGAGGAGTTCCTTCT +
Preference number: 2 (lower is better)
Translates to: GKLGQHQEGSAERLPVGWEVSGA*FRGVPS
Trigger: AGAAGGAACTCCTCTGAAGCAAGCTCCGGAGACTTC...CCAACCCACAGGGAGTCTCTCCGCAGAGCCTTCTTGGTGTTGCCCTAACTTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304834.11
3UTR-3UTR GCA 90 bp GTTAGGGCAACACCAAGAAGGCTCTGCGGAGAGACTCCCTGTGGGTTGGGGCCTACTAGAAAACACTCATaGCATGGCCCACAGACCCAA +
Preference number: 2 (lower is better)
Translates to: VRATPRRLCGETPCGLGPTRKHS*HGPQTQ
Trigger: TTGGGTCTGTGGGCCATGGCATGAGTGTTTTCTAGT...AGGCCCCAACCCACAGGGAGTCTCTCCGCAGAGCCTTCTTGGTGTTGCCCTAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
3UTR-3UTR GCA 90 bp CAACACGCCTGTGGGACCCCGTTCCTGGAGGAAGACCCGCTTCAGTGTGATTGCAAAAGGCAGTTTCTTTaGTTTGCAGGCGGCAAGGCA +
Preference number: 2 (lower is better)
Translates to: QHACGTPFLEEDPLQCDCKRQFL*FAGGKA
Trigger: TGCCTTGCCGCCTGCAAAGCAAAGAAACTGCCTTTT...GCAATCACACTGAAGCGGGTCTTCCTCCAGGAACGGGGTCCCACAGGCGTGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
3UTR-3UTR CCA 90 bp GAGCAAAGGCTTTGCTCATCAGCCAGCCAGTCTTGTTACTATCTGGCTACTTTTGGGATTTCTTCTGGATaGCACTGGGGCCGGGGCCAC +
Preference number: 2 (lower is better)
Translates to: EQRLCSSASQSCYYLATFGISSG*HWGRGH
Trigger: GTGGCCCCGGCCCCAGTGCCATCCAGAAGAAATCCC...AAAAGTAGCCAGATAGTAACAAGACTGGCTGGCTGATGAGCAAAGCCTTTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000304834.11
3UTR-3UTR CCA 90 bp CCAAGCCTTCCTCTGCGTGAGAGCAAAGGCTTTGCTCATCAGCCAGCCAGTCTTAAAACACTCATGCCATaGCCCACAGACCCAAGAGTC +
Preference number: 2 (lower is better)
Translates to: PSLPLRESKGFAHQPASLKTLMP*PTDPRV
Trigger: GACTCTTGGGTCTGTGGGCCATGGCATGAGTGTTTT...AAGACTGGCTGGCTGATGAGCAAAGCCTTTGCTCTCACGCAGAGGAAGGCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
3UTR-3UTR GCA 90 bp GGAGGCGCAGGCCTCTTCATTGTTCACATGTCACAGGAGGAGGCTCTGAGCAAAACTAGAAAACACTCATaGCATGGCCCACAGACCCAA +
Preference number: 2 (lower is better)
Translates to: GGAGLFIVHMSQEEALSKTRKHS*HGPQTQ
Trigger: TTGGGTCTGTGGGCCATGGCATGAGTGTTTTCTAGT...TTTGCTCAGAGCCTCCTCCTGTGACATGTGAACAATGAAGAGGCCTGCGCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
3UTR-3UTR GCA 90 bp GGAACGGTGCCTGTGGACTGTTTATGGTCTGTCCAGTTGAGGCTTGGTAAACCCACTAGAAAACACTCATaGCATGGCCCACAGACCCAA +
Preference number: 2 (lower is better)
Translates to: GTVPVDCLWSVQLRLGKPTRKHS*HGPQTQ
Trigger: TTGGGTCTGTGGGCCATGGCATGAGTGTTTTCTAGT...GGGTTTACCAAGCCTCAACTGGACAGACCATAAACAGTCCACAGGCACCGTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
3UTR-3UTR GCA 90 bp CATCATGCACACAGCATCAGGTTATTTAAAACAACACGCCTGTGGGACCCCGTTGCCTGGCAGGAACGGTaGCTGTGGACTGTTTATGGT +
Preference number: 2 (lower is better)
Translates to: HHAHSIRLFKTTRLWDPVAWQER*LWTVYG
Trigger: ACCATAAACAGTCCACAGGCACCGTTCCTGCCAGGC...AACGGGGTCCCACAGGCGTGTTGTTTTAAATAACCTGATGCTGTGTGCATGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
3UTR-3UTR CCA 90 bp CCAGGCAGTTTCATTGTACATCCAAGCCTTCCTCTGCGTGAGAGCAAAGGCTTTCAGGAACGGTGCCTGTaGACTGTTTATGGTCTGTCC +
Preference number: 2 (lower is better)
Translates to: PGSFIVHPSLPLRESKGFQERCL*TVYGLS
Trigger: GGACAGACCATAAACAGTCCACAGGCACCGTTCCTG...AAAGCCTTTGCTCTCACGCAGAGGAAGGCTTGGATGTACAATGAAACTGCCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
3UTR-3UTR TCA 90 bp CCAGGCAGTTTCATTGTACATCCAAGCCTTCCTCTGCGTGAGAGCAAAGGCTTTTATGGTCTGTCCAGTTaGGGCTTGGTAAACCCAAGT +
Preference number: 2 (lower is better)
Translates to: PGSFIVHPSLPLRESKGFYGLSS*GLVNPS
Trigger: ACTTGGGTTTACCAAGCCTCAACTGGACAGACCATA...AAAGCCTTTGCTCTCACGCAGAGGAAGGCTTGGATGTACAATGAAACTGCCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
3UTR-3UTR GCA 90 bp CTTTTAGTTCCAGGCAGTTTCATTGTACATCCAAGCCTTCCTCTGCGTGAGAGCAAAAGGCAGTTTCTTTaGTTTGCAGGCGGCAAGGCA +
Preference number: 2 (lower is better)
Translates to: LLVPGSFIVHPSLPLRESKRQFL*FAGGKA
Trigger: TGCCTTGCCGCCTGCAAAGCAAAGAAACTGCCTTTT...GCTCTCACGCAGAGGAAGGCTTGGATGTACAATGAAACTGCCTGGAACTAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
3UTR-3UTR TCA 90 bp CCAGGCAGTTTCATTGTACATCCAAGCCTTCCTCTGCGTGAGAGCAAAGGCTTTGTGTCCACATTTTCATaGATATCACCTTCTCCCTTC +
Preference number: 2 (lower is better)
Translates to: PGSFIVHPSLPLRESKGFVSTFS*ISPSPF
Trigger: GAAGGGAGAAGGTGATATTCATGAAAATGTGGACAC...AAAGCCTTTGCTCTCACGCAGAGGAAGGCTTGGATGTACAATGAAACTGCCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304834.11
3UTR CAA 90 bp GTTTCATTGTACATCCAAGCCTTCCTCTGCGTGAGAGCAAAGGCTTaGCTCATCAGCCAGCCAGTCTTGTTACTATCTGGCTACTTTTTA +
Preference number: 2 (lower is better)
Translates to: VSLYIQAFLCVRAKA*LISQPVLLLSGYFL
Trigger: TAAAAAGTAGCCAGATAGTAACAAGACTGGCTGGCTGATGAGCAAAGCCTTTGCTCTCACGCAGAGGAAGGCTTGGATGTACAATGAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
3UTR-3UTR TCA 90 bp CATCATGCACACAGCATCAGGTTATTTAAAACAACACGCCTGTGGGACCCCGTTTGGATATTGTTTACTTaGAGCAACAGTCCAGGATTG +
Preference number: 2 (lower is better)
Translates to: HHAHSIRLFKTTRLWDPVWILFT*SNSPGL
Trigger: CAATCCTGGACTGTTGCTTCAAGTAAACAATATCCA...AACGGGGTCCCACAGGCGTGTTGTTTTAAATAACCTGATGCTGTGTGCATGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409753.8
ENST00000476258.5
3UTR-3UTR CAA 90 bp TGTGGGACCCCGTTCCTGGAGGAAGACCCGCTTCAGTGTGATTGCCTCCCTTGCGCGCAGGCCTCTTCATaGTTCACATGTCACAGGAGG +
Preference number: 3 (lower is better)
Translates to: CGTPFLEEDPLQCDCLPCAQASS*FTCHRR
Trigger: CCTCCTGTGACATGTGAACAATGAAGAGGCCTGCGC...GCAAGGGAGGCAATCACACTGAAGCGGGTCTTCCTCCAGGAACGGGGTCCCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
3UTR-3UTR CAA 90 bp CGTTCCTGGAGGAAGACCCGCTTCAGTGTGATTGCCTCCCTTGCTTCACTGCTTGTGAGAGCAAAGGCTTaGCTCATCAGCCAGCCAGTC +
Preference number: 3 (lower is better)
Translates to: RSWRKTRFSVIASLASLLVRAKA*LISQPV
Trigger: GACTGGCTGGCTGATGAGCAAAGCCTTTGCTCTCAC...AAGCAGTGAAGCAAGGGAGGCAATCACACTGAAGCGGGTCTTCCTCCAGGAACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
3UTR GCA 72 bp ACCCCGTTCCTGGAGGAAGACCCGCTTCAGTGTGATTaGCTCCCTTGCTTCACTGCTTTTAGTTCCAGGCAG +
Preference number: 3 (lower is better)
Translates to: TPFLEEDPLQCD*LPCFTAFSSRQ
Trigger: CTGCCTGGAACTAAAAGCAGTGAAGCAAGGGAGGCAATCACACTGAAGCGGGTCTTCCTCCAGGAACGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
3UTR CCA 72 bp GCACACAGCATCAGGTTATTTAAAACAACACGCCTGTaGGACCCCGTTCCTGGAGGAAGACCCGCTTCAGTG +
Preference number: 3 (lower is better)
Translates to: AHSIRLFKTTRL*DPVPGGRPASV
Trigger: CACTGAAGCGGGTCTTCCTCCAGGAACGGGGTCCCACAGGCGTGTTGTTTTAAATAACCTGATGCTGTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
3UTR-3UTR CAA 90 bp ACAGAACGACAGCGTTCAGGACAGTCAGAGCTAACCCAAGACGAGGCTGGACTTAGAAGTCTCCGGAGCTaGCTTCAGAGGAGTTCCTTC +
Preference number: 3 (lower is better)
Translates to: TERQRSGQSELTQDEAGLRSLRS*LQRSSF
Trigger: GAAGGAACTCCTCTGAAGCAAGCTCCGGAGACTTCT...AAGTCCAGCCTCGTCTTGGGTTAGCTCTGACTGTCCTGAACGCTGTCGTTCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304834.11
3UTR-3UTR CAA 90 bp AAGACCCGCTTCAGTGTGATTGCCTCCCTTGCTTCACTGCTTTTAGTTCCAGGCGTGAGAGCAAAGGCTTaGCTCATCAGCCAGCCAGTC +
Preference number: 3 (lower is better)
Translates to: KTRFSVIASLASLLLVPGVRAKA*LISQPV
Trigger: GACTGGCTGGCTGATGAGCAAAGCCTTTGCTCTCAC...GCCTGGAACTAAAAGCAGTGAAGCAAGGGAGGCAATCACACTGAAGCGGGTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
3UTR TCA 72 bp GCCTCTTCATTGTTCACATGTCACAGGAGGAGGCTCTaGGCAAAGGCCACTGGCAAGTTAGGGCAACACCAA +
Preference number: 3 (lower is better)
Translates to: ASSLFTCHRRRL*AKATGKLGQHQ
Trigger: TTGGTGTTGCCCTAACTTGCCAGTGGCCTTTGCTCAGAGCCTCCTCCTGTGACATGTGAACAATGAAGAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
3UTR-3UTR CAA 90 bp GAGCAAAGGCTTTGCTCATCAGCCAGCCAGTCTTGTTACTATCTGGCTACTTTTCTGCCACCACTAGACTaGGCACCTGCTGACTTGGCC +
Preference number: 3 (lower is better)
Translates to: EQRLCSSASQSCYYLATFLPPLD*APADLA
Trigger: GGCCAAGTCAGCAGGTGCCAAGTCTAGTGGTGGCAG...AAAAGTAGCCAGATAGTAACAAGACTGGCTGGCTGATGAGCAAAGCCTTTGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304834.11
3UTR-3UTR CAA 90 bp CAGCATCATGCACACAGCATCAGGTTATTTAAAACAACACGCCTGTGGGACCCCGCGCAGGCCTCTTCATaGTTCACATGTCACAGGAGG +
Preference number: 3 (lower is better)
Translates to: QHHAHSIRLFKTTRLWDPAQASS*FTCHRR
Trigger: CCTCCTGTGACATGTGAACAATGAAGAGGCCTGCGC...GGGGTCCCACAGGCGTGTTGTTTTAAATAACCTGATGCTGTGTGCATGATGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
3UTR-3UTR CAA 90 bp CATCATGCACACAGCATCAGGTTATTTAAAACAACACGCCTGTGGGACCCCGTTGGCAGTTTCTTTGCTTaGCAGGCGGCAAGGCAGGAG +
Preference number: 3 (lower is better)
Translates to: HHAHSIRLFKTTRLWDPVGSFFA*QAARQE
Trigger: CTCCTGCCTTGCCGCCTGCAAAGCAAAGAAACTGCC...AACGGGGTCCCACAGGCGTGTTGTTTTAAATAACCTGATGCTGTGTGCATGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
3UTR GCA 72 bp TTCCAGGCAGTTTCATTGTACATCCAAGCCTTCCTCTaGGTGAGAGCAAAGGCTTTGCTCATCAGCCAGCCA +
Preference number: 3 (lower is better)
Translates to: FQAVSLYIQAFL*VRAKALLISQP
Trigger: TGGCTGGCTGATGAGCAAAGCCTTTGCTCTCACGCAGAGGAAGGCTTGGATGTACAATGAAACTGCCTGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
3UTR-3UTR CAA 90 bp TATTTAAAACAACACGCCTGTGGGACCCCGTTCCTGGAGGAAGACCCGCTTCAGATCAGCCAGCCAGTCTaGTTACTATCTGGCTACTTT +
Preference number: 3 (lower is better)
Translates to: YLKQHACGTPFLEEDPLQISQPV*LLSGYF
Trigger: AAAGTAGCCAGATAGTAACAAGACTGGCTGGCTGAT...CTGAAGCGGGTCTTCCTCCAGGAACGGGGTCCCACAGGCGTGTTGTTTTAAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
3UTR GCA 72 bp CTGGAGGAAGACCCGCTTCAGTGTGATTGCCTCCCTTaGTTCACTGCTTTTAGTTCCAGGCAGTTTCATTGT +
Preference number: 3 (lower is better)
Translates to: LEEDPLQCDCLP*FTAFSSRQFHC
Trigger: ACAATGAAACTGCCTGGAACTAAAAGCAGTGAAGCAAGGGAGGCAATCACACTGAAGCGGGTCTTCCTCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
3UTR GCA 72 bp AAGCTTTCCCTCCAATCTACTACTAGAAAACACTCATaGCATGGCCCACAGACCCAAGAGTCAAGGACAGAG +
Preference number: 3 (lower is better)
Translates to: KLSLQSTTRKHS*HGPQTQESRTE
Trigger: CTCTGTCCTTGACTCTTGGGTCTGTGGGCCATGGCATGAGTGTTTTCTAGTAGTAGATTGGAGGGAAAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
3UTR TCA 72 bp GAACGGTGCCTGTGGACTGTTTATGGTCTGTCCAGTTaGGGCTTGGTAAACCCAAGTAAAGTGTTAAAAACC +
Preference number: 3 (lower is better)
Translates to: ERCLWTVYGLSS*GLVNPSKVLKT
Trigger: GGTTTTTAACACTTTACTTGGGTTTACCAAGCCTCAACTGGACAGACCATAAACAGTCCACAGGCACCGTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
CDS-3UTR GCA 90 bp CTGAGCAAAGGCCACTGGCAAGTTAGGGCAACACCAAGAAGGCTCTGCGGAGAGACAGCCGACCACCGCTaGAGGAGCCGCCGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: LSKGHWQVRATPRRLCGETADHR*RSRRCR
Trigger: GCGGCAGCGGCGGCTCCTGCAGCGGTGGTCGGCTGT...CTCTCCGCAGAGCCTTCTTGGTGTTGCCCTAACTTGCCAGTGGCCTTTGCTCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304834.11
ENST00000356033.8
CDS-3UTR CCA 90 bp CCTGTGGGACCCCGTTCCTGGAGGAAGACCCGCTTCAGTGTGATTGCCTCCCTTTCTTCTGGATGGCACTaGGGCCGGGGCCACCGGGCT +
Preference number: 4 (lower is better)
Translates to: PVGPRSWRKTRFSVIASLSSGWH*GRGHRA
Trigger: AGCCCGGTGGCCCCGGCCCCAGTGCCATCCAGAAGA...AAGGGAGGCAATCACACTGAAGCGGGTCTTCCTCCAGGAACGGGGTCCCACAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
CDS-3UTR GCA 90 bp TGTGGGACCCCGTTCCTGGAGGAAGACCCGCTTCAGTGTGATTGCCTCCCTTGCCCACCACCCTGGGGATaGACCAGCCGGGATGCACAC +
Preference number: 4 (lower is better)
Translates to: CGTPFLEEDPLQCDCLPCPPPWG*TSRDAH
Trigger: GTGTGCATCCCGGCTGGTGCATCCCCAGGGTGGTGG...GCAAGGGAGGCAATCACACTGAAGCGGGTCTTCCTCCAGGAACGGGGTCCCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476258.5
CDS-3UTR CCA 90 bp GCCTGTGGGACCCCGTTCCTGGAGGAAGACCCGCTTCAGTGTGATTGCCTCCCTCATGCGGCATTACGATaGGCTGTGGCGGCCACGGCT +
Preference number: 4 (lower is better)
Translates to: ACGTPFLEEDPLQCDCLPHAALR*AVAATA
Trigger: AGCCGTGGCCGCCACAGCCCATCGTAATGCCGCATG...AGGGAGGCAATCACACTGAAGCGGGTCTTCCTCCAGGAACGGGGTCCCACAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304834.11
ENST00000356033.8
CDS-3UTR CCA 90 bp GGCGGCAAGGCAGGAGGCGCAGGCCTCTTCATTGTTCACATGTCACAGGAGGAGAGGAGCGAGGTAGGCTaGCGCCGGAGCAGAACGCTC +
Preference number: 4 (lower is better)
Translates to: GGKAGGAGLFIVHMSQEERSEVG*RRSRTL
Trigger: GAGCGTTCTGCTCCGGCGCCAGCCTACCTCGCTCCT...CTCCTCCTGTGACATGTGAACAATGAAGAGGCCTGCGCCTCCTGCCTTGCCGCC
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
CDS-3UTR CCA 90 bp GCAAGGCAGGAGGCGCAGGCCTCTTCATTGTTCACATGTCACAGGAGGAGGCTCTCTTCTGGATGGCACTaGGGCCGGGGCCACCGGGCT +
Preference number: 4 (lower is better)
Translates to: ARQEAQASSLFTCHRRRLSSGWH*GRGHRA
Trigger: AGCCCGGTGGCCCCGGCCCCAGTGCCATCCAGAAGA...GAGCCTCCTCCTGTGACATGTGAACAATGAAGAGGCCTGCGCCTCCTGCCTTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
CDS-3UTR CCA 90 bp GCAGGCGGCAAGGCAGGAGGCGCAGGCCTCTTCATTGTTCACATGTCACAGGAGGGGATTTCTTCTGGATaGCACTGGGGCCGGGGCCAC +
Preference number: 4 (lower is better)
Translates to: AGGKAGGAGLFIVHMSQEGISSG*HWGRGH
Trigger: GTGGCCCCGGCCCCAGTGCCATCCAGAAGAAATCCC...CTCCTGTGACATGTGAACAATGAAGAGGCCTGCGCCTCCTGCCTTGCCGCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
CDS-3UTR GCA 90 bp GGACCCCGTTCCTGGAGGAAGACCCGCTTCAGTGTGATTGCCTCCCTTGCTTCAGCGAGACCAACCGCATaGCACGGGGGAGAGACAGGA +
Preference number: 4 (lower is better)
Translates to: GPRSWRKTRFSVIASLASARPTA*HGGETG
Trigger: TCCTGTCTCTCCCCCGTGGCATGCGGTTGGTCTCGC...TGAAGCAAGGGAGGCAATCACACTGAAGCGGGTCTTCCTCCAGGAACGGGGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476258.5
CDS-3UTR CCA 90 bp AGGCGGCAAGGCAGGAGGCGCAGGCCTCTTCATTGTTCACATGTCACAGGAGGAGGGATTTCTTCTGGATaGCACTGGGGCCGGGGCCAC +
Preference number: 4 (lower is better)
Translates to: RRQGRRRRPLHCSHVTGGGISSG*HWGRGH
Trigger: GTGGCCCCGGCCCCAGTGCCATCCAGAAGAAATCCC...TCCTCCTGTGACATGTGAACAATGAAGAGGCCTGCGCCTCCTGCCTTGCCGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
CDS-3UTR CCA 90 bp GGCAAGTTAGGGCAACACCAAGAAGGCTCTGCGGAGAGACTCCCTGTGGGTTGGGGGATTTCTTCTGGATaGCACTGGGGCCGGGGCCAC +
Preference number: 4 (lower is better)
Translates to: GKLGQHQEGSAERLPVGWGISSG*HWGRGH
Trigger: GTGGCCCCGGCCCCAGTGCCATCCAGAAGAAATCCC...CCAACCCACAGGGAGTCTCTCCGCAGAGCCTTCTTGGTGTTGCCCTAACTTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
CDS-3UTR GCA 90 bp GCCTGTGGGACCCCGTTCCTGGAGGAAGACCCGCTTCAGTGTGATTGCCTCCCTGCAGTTTCTTTGCTTTaGAGGCGGCAAGGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: ACGTPFLEEDPLQCDCLPAVSLL*RRQGRR
Trigger: CCTCCTGCCTTGCCGCCTGCAAAGCAAAGAAACTGC...AGGGAGGCAATCACACTGAAGCGGGTCTTCCTCCAGGAACGGGGTCCCACAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
CDS-3UTR CCA 90 bp TACATCCAAGCCTTCCTCTGCGTGAGAGCAAAGGCTTTGCTCATCAGCCAGCCATCTTCTGGATGGCACTaGGGCCGGGGCCACCGGGCT +
Preference number: 4 (lower is better)
Translates to: YIQAFLCVRAKALLISQPSSGWH*GRGHRA
Trigger: AGCCCGGTGGCCCCGGCCCCAGTGCCATCCAGAAGA...TGGCTGGCTGATGAGCAAAGCCTTTGCTCTCACGCAGAGGAAGGCTTGGATGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
CDS-3UTR CCA 90 bp GGACCCCGTTCCTGGAGGAAGACCCGCTTCAGTGTGATTGCCTCCCTTGCTTCAAACCCAAGACGAGGCTaGACTTGCCGCCAGGGGGAT +
Preference number: 4 (lower is better)
Translates to: GPRSWRKTRFSVIASLASNPRRG*TCRQGD
Trigger: ATCCCCCTGGCGGCAAGTCCAGCCTCGTCTTGGGTT...TGAAGCAAGGGAGGCAATCACACTGAAGCGGGTCTTCCTCCAGGAACGGGGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
CDS-3UTR CCA 90 bp TGCCATGGCCCACAGACCCAAGAGTCAAGGACAGAGAGAAACCTGTTCTTCAAAGGATCCCCGGGCACCTaGGGGGCCAAGCCCACCACC +
Preference number: 4 (lower is better)
Translates to: CHGPQTQESRTERNLFFKGSPGT*GAKPTT
Trigger: GGTGGTGGGCTTGGCCCCCCAGGTGCCCGGGGATCC...TTTGAAGAACAGGTTTCTCTCTGTCCTTGACTCTTGGGTCTGTGGGCCATGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476258.5
CDS-3UTR TCA 90 bp GGCAAGTTAGGGCAACACCAAGAAGGCTCTGCGGAGAGACTCCCTGTGGGTTGGTGGGGTCGACTCCCTTaGAGGTGGTGGTTGTGGTCA +
Preference number: 4 (lower is better)
Translates to: GKLGQHQEGSAERLPVGWWGRLP*RWWLWS
Trigger: TGACCACAACCACCACCTTCAAGGGAGTCGACCCCA...CCAACCCACAGGGAGTCTCTCCGCAGAGCCTTCTTGGTGTTGCCCTAACTTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
CDS-3UTR GCA 90 bp GGCGGCAAGGCAGGAGGCGCAGGCCTCTTCATTGTTCACATGTCACAGGAGGAGGCCTGGCAGGAACGGTaGCTGTGGACTGTTTATGGT +
Preference number: 4 (lower is better)
Translates to: GGKAGGAGLFIVHMSQEEAWQER*LWTVYG
Trigger: ACCATAAACAGTCCACAGGCACCGTTCCTGCCAGGC...CTCCTCCTGTGACATGTGAACAATGAAGAGGCCTGCGCCTCCTGCCTTGCCGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
CDS-3UTR GCA 90 bp CCTGTGGGACCCCGTTCCTGGAGGAAGACCCGCTTCAGTGTGATTGCCTCCCTTGCAGTTTCTTTGCTTTaGAGGCGGCAAGGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: PVGPRSWRKTRFSVIASLAVSLL*RRQGRR
Trigger: CCTCCTGCCTTGCCGCCTGCAAAGCAAAGAAACTGC...AAGGGAGGCAATCACACTGAAGCGGGTCTTCCTCCAGGAACGGGGTCCCACAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
CDS-3UTR CCA 90 bp ACGCCTGTGGGACCCCGTTCCTGGAGGAAGACCCGCTTCAGTGTGATTGCCTCCTTCCTATTGGCTCTCTaGAGTGCCAAGCACCATGCG +
Preference number: 4 (lower is better)
Translates to: TPVGPRSWRKTRFSVIASFLLAL*SAKHHA
Trigger: CGCATGGTGCTTGGCACTCCAGAGAGCCAATAGGAA...GGAGGCAATCACACTGAAGCGGGTCTTCCTCCAGGAACGGGGTCCCACAGGCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304834.11
ENST00000356033.8
CDS-3UTR CCA 90 bp CGTTCCTGGAGGAAGACCCGCTTCAGTGTGATTGCCTCCCTTGCTTCACTGCTTGGGATTTCTTCTGGATaGCACTGGGGCCGGGGCCAC +
Preference number: 4 (lower is better)
Translates to: RSWRKTRFSVIASLASLLGISSG*HWGRGH
Trigger: GTGGCCCCGGCCCCAGTGCCATCCAGAAGAAATCCC...AAGCAGTGAAGCAAGGGAGGCAATCACACTGAAGCGGGTCTTCCTCCAGGAACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
CDS-3UTR CCA 90 bp ACCCCGTTCCTGGAGGAAGACCCGCTTCAGTGTGATTGCCTCCCTTGCTTCACTAACCCAAGACGAGGCTaGACTTGCCGCCAGGGGGAT +
Preference number: 4 (lower is better)
Translates to: TPFLEEDPLQCDCLPCFTNPRRG*TCRQGD
Trigger: ATCCCCCTGGCGGCAAGTCCAGCCTCGTCTTGGGTT...AGTGAAGCAAGGGAGGCAATCACACTGAAGCGGGTCTTCCTCCAGGAACGGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
CDS-3UTR CCA 90 bp ACGCCTGTGGGACCCCGTTCCTGGAGGAAGACCCGCTTCAGTGTGATTGCCTCCCAGGAACGGTGCCTGTaGACTGTTTATGGTCTGTCC +
Preference number: 4 (lower is better)
Translates to: TPVGPRSWRKTRFSVIASQERCL*TVYGLS
Trigger: GGACAGACCATAAACAGTCCACAGGCACCGTTCCTG...GGAGGCAATCACACTGAAGCGGGTCTTCCTCCAGGAACGGGGTCCCACAGGCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
CDS-3UTR TCA 90 bp CACTGGCAAGTTAGGGCAACACCAAGAAGGCTCTGCGGAGAGACTCCCTGTGGGAGACCCGCTTCAGTGTaGTTGCCTCCCTTGCTTCAC +
Preference number: 4 (lower is better)
Translates to: HWQVRATPRRLCGETPCGRPASV*LPPLLH
Trigger: GTGAAGCAAGGGAGGCAATCACACTGAAGCGGGTCT...CCCACAGGGAGTCTCTCCGCAGAGCCTTCTTGGTGTTGCCCTAACTTGCCAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
CDS-3UTR TCA 90 bp TGCCATGGCCCACAGACCCAAGAGTCAAGGACAGAGAGAAACCTGTTCTTCAAAGGAGCCCGCCGGACCTaGTCGATCCGGTCTCCGGAT +
Preference number: 4 (lower is better)
Translates to: CHGPQTQESRTERNLFFKGARRT*SIRSPD
Trigger: ATCCGGAGACCGGATCGATCAGGTCCGGCGGGCTCC...TTTGAAGAACAGGTTTCTCTCTGTCCTTGACTCTTGGGTCTGTGGGCCATGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476258.5
CDS-3UTR GCA 90 bp AAGACCCGCTTCAGTGTGATTGCCTCCCTTGCTTCACTGCTTTTAGTTCCAGGCAACGAAAACCGGCCGTaGTCCGAGGGGCGACCAGCC +
Preference number: 4 (lower is better)
Translates to: KTRFSVIASLASLLLVPGNENRP*SEGRPA
Trigger: GGCTGGTCGCCCCTCGGAGCACGGCCGGTTTTCGTT...GCCTGGAACTAAAAGCAGTGAAGCAAGGGAGGCAATCACACTGAAGCGGGTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000476258.5
CDS-3UTR GCA 90 bp AATAAAAGGCAGTTTCTTTGCTTTGCAGGCGGCAAGGCAGGAGGCGCAGGCCTCTCCGGATCCAATGGCTaGGCGCGAGAGCGAGACCAA +
Preference number: 4 (lower is better)
Translates to: NKRQFLCFAGGKAGGAGLSGSNG*ARERDQ
Trigger: TTGGTCTCGCTCTCGCGCGCAGCCATTGGATCCGGA...GAGGCCTGCGCCTCCTGCCTTGCCGCCTGCAAAGCAAAGAAACTGCCTTTTATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476258.5
CDS-3UTR CCA 90 bp CTACTACTAGAAAACACTCATGCCATGGCCCACAGACCCAAGAGTCAAGGACAGTCTTCTGGATGGCACTaGGGCCGGGGCCACCGGGCT +
Preference number: 4 (lower is better)
Translates to: LLLENTHAMAHRPKSQGQSSGWH*GRGHRA
Trigger: AGCCCGGTGGCCCCGGCCCCAGTGCCATCCAGAAGA...CTGTCCTTGACTCTTGGGTCTGTGGGCCATGGCATGAGTGTTTTCTAGTAGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000470924.5
ENST00000476258.5
ENST00000482348.5
CDS-3UTR CCA 90 bp TGTGGGACCCCGTTCCTGGAGGAAGACCCGCTTCAGTGTGATTGCCTCCCTTGCCTGAGCAAAGGCCACTaGCAAGTTAGGGCAACACCA +
Preference number: 4 (lower is better)
Translates to: CGTPFLEEDPLQCDCLPCLSKGH*QVRATP
Trigger: TGGTGTTGCCCTAACTTGCCAGTGGCCTTTGCTCAG...GCAAGGGAGGCAATCACACTGAAGCGGGTCTTCCTCCAGGAACGGGGTCCCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
CDS-3UTR CCA 90 bp GTTAGGGCAACACCAAGAAGGCTCTGCGGAGAGACTCCCTGTGGGTTGGGGCCTCTGAGCAAAGGCCACTaGCAAGTTAGGGCAACACCA +
Preference number: 4 (lower is better)
Translates to: VRATPRRLCGETPCGLGPLSKGH*QVRATP
Trigger: TGGTGTTGCCCTAACTTGCCAGTGGCCTTTGCTCAG...AGGCCCCAACCCACAGGGAGTCTCTCCGCAGAGCCTTCTTGGTGTTGCCCTAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
CDS-3UTR CCA 90 bp AGGCGGCAAGGCAGGAGGCGCAGGCCTCTTCATTGTTCACATGTCACAGGAGGAAAAACAACACGCCTGTaGGACCCCGTTCCTGGAGGA +
Preference number: 4 (lower is better)
Translates to: RRQGRRRRPLHCSHVTGGKTTRL*DPVPGG
Trigger: TCCTCCAGGAACGGGGTCCCACAGGCGTGTTGTTTT...TCCTCCTGTGACATGTGAACAATGAAGAGGCCTGCGCCTCCTGCCTTGCCGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
CDS-3UTR CCA 90 bp GCAAGGCAGGAGGCGCAGGCCTCTTCATTGTTCACATGTCACAGGAGGAGGCTCAAAACAACACGCCTGTaGGACCCCGTTCCTGGAGGA +
Preference number: 4 (lower is better)
Translates to: ARQEAQASSLFTCHRRRLKTTRL*DPVPGG
Trigger: TCCTCCAGGAACGGGGTCCCACAGGCGTGTTGTTTT...GAGCCTCCTCCTGTGACATGTGAACAATGAAGAGGCCTGCGCCTCCTGCCTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
CDS-3UTR CCA 90 bp ATCAGGTTATTTAAAACAACACGCCTGTGGGACCCCGTTCCTGGAGGAAGACCCCCAAGCCCACCACCCTaGGGATGCACCAGCCGGGAT +
Preference number: 4 (lower is better)
Translates to: IRLFKTTRLWDPVPGGRPPSPPP*GCTSRD
Trigger: ATCCCGGCTGGTGCATCCCCAGGGTGGTGGGCTTGG...GGGTCTTCCTCCAGGAACGGGGTCCCACAGGCGTGTTGTTTTAAATAACCTGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000476258.5
CDS-3UTR TCA 90 bp CCAAGCCTTCCTCTGCGTGAGAGCAAAGGCTTTGCTCATCAGCCAGCCAGTCTTTGGGGTCGACTCCCTTaGAGGTGGTGGTTGTGGTCA +
Preference number: 4 (lower is better)
Translates to: PSLPLRESKGFAHQPASLWGRLP*RWWLWS
Trigger: TGACCACAACCACCACCTTCAAGGGAGTCGACCCCA...AAGACTGGCTGGCTGATGAGCAAAGCCTTTGCTCTCACGCAGAGGAAGGCTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
CDS-3UTR TCA 90 bp TCTACTACTAGAAAACACTCATGCCATGGCCCACAGACCCAAGAGTCAAGGACAGGTGAAGGGTCGCGATaGCCAGCCCCGCTCGACCAC +
Preference number: 4 (lower is better)
Translates to: STTRKHSCHGPQTQESRTGEGSR*PAPLDH
Trigger: GTGGTCGAGCGGGGCTGGTCATCGCGACCCTTCACC...TGTCCTTGACTCTTGGGTCTGTGGGCCATGGCATGAGTGTTTTCTAGTAGTAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476258.5
CDS-3UTR GCA 90 bp CTGAGCAAAGGCCACTGGCAAGTTAGGGCAACACCAAGAAGGCTCTGCGGAGAGGAGTGCCAAGCACCATaGGGCATTACGATGGGCTGT +
Preference number: 4 (lower is better)
Translates to: LSKGHWQVRATPRRLCGEECQAP*GITMGC
Trigger: ACAGCCCATCGTAATGCCGCATGGTGCTTGGCACTC...CTCTCCGCAGAGCCTTCTTGGTGTTGCCCTAACTTGCCAGTGGCCTTTGCTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304834.11
ENST00000356033.8
CDS-3UTR CCA 90 bp TCAGATCTAAGAAGTCTCCGGAGCTTGCTTCAGAGGAGTTCCTTCTCTGCAGTCAGGAGCGAGGTAGGCTaGCGCCGGAGCAGAACGCTC +
Preference number: 4 (lower is better)
Translates to: SDLRSLRSLLQRSSFSAVRSEVG*RRSRTL
Trigger: GAGCGTTCTGCTCCGGCGCCAGCCTACCTCGCTCCT...GACTGCAGAGAAGGAACTCCTCTGAAGCAAGCTCCGGAGACTTCTTAGATCTGA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304834.11
CDS-3UTR CCA 90 bp TGCCATGGCCCACAGACCCAAGAGTCAAGGACAGAGAGAAACCTGTTCTTCAAAAGGAGCGAGGTAGGCTaGCGCCGGAGCAGAACGCTC +
Preference number: 4 (lower is better)
Translates to: CHGPQTQESRTERNLFFKRSEVG*RRSRTL
Trigger: GAGCGTTCTGCTCCGGCGCCAGCCTACCTCGCTCCT...TTTGAAGAACAGGTTTCTCTCTGTCCTTGACTCTTGGGTCTGTGGGCCATGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
CDS-3UTR CCA 90 bp CATGGCCCACAGACCCAAGAGTCAAGGACAGAGAGAAACCTGTTCTTCAAAAGATCTTCTGGATGGCACTaGGGCCGGGGCCACCGGGCT +
Preference number: 4 (lower is better)
Translates to: HGPQTQESRTERNLFFKRSSGWH*GRGHRA
Trigger: AGCCCGGTGGCCCCGGCCCCAGTGCCATCCAGAAGA...TCTTTTGAAGAACAGGTTTCTCTCTGTCCTTGACTCTTGGGTCTGTGGGCCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000470924.5
ENST00000476258.5
ENST00000482348.5
CDS-3UTR CCA 90 bp ACTCATGCCATGGCCCACAGACCCAAGAGTCAAGGACAGAGAGAAACCTGTTCTGGGATTTCTTCTGGATaGCACTGGGGCCGGGGCCAC +
Preference number: 4 (lower is better)
Translates to: THAMAHRPKSQGQRETCSGISSG*HWGRGH
Trigger: GTGGCCCCGGCCCCAGTGCCATCCAGAAGAAATCCC...AGAACAGGTTTCTCTCTGTCCTTGACTCTTGGGTCTGTGGGCCATGGCATGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000470924.5
ENST00000476258.5
ENST00000482348.5
CDS-3UTR CCA 90 bp ACAGAACGACAGCGTTCAGGACAGTCAGAGCTAACCCAAGACGAGGCTGGACTTAACCCAAGACGAGGCTaGACTTGCCGCCAGGGGGAT +
Preference number: 4 (lower is better)
Translates to: TERQRSGQSELTQDEAGLNPRRG*TCRQGD
Trigger: ATCCCCCTGGCGGCAAGTCCAGCCTCGTCTTGGGTT...AAGTCCAGCCTCGTCTTGGGTTAGCTCTGACTGTCCTGAACGCTGTCGTTCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304834.11
CDS-3UTR CCA 90 bp CAACACGCCTGTGGGACCCCGTTCCTGGAGGAAGACCCGCTTCAGTGTGATTGCAAAACACTCATGCCATaGCCCACAGACCCAAGAGTC +
Preference number: 4 (lower is better)
Translates to: QHACGTPFLEEDPLQCDCKTLMP*PTDPRV
Trigger: GACTCTTGGGTCTGTGGGCCATGGCATGAGTGTTTT...GCAATCACACTGAAGCGGGTCTTCCTCCAGGAACGGGGTCCCACAGGCGTGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
CDS-3UTR CCA 90 bp AGGCGGCAAGGCAGGAGGCGCAGGCCTCTTCATTGTTCACATGTCACAGGAGGACAGGAACGGTGCCTGTaGACTGTTTATGGTCTGTCC +
Preference number: 4 (lower is better)
Translates to: RRQGRRRRPLHCSHVTGGQERCL*TVYGLS
Trigger: GGACAGACCATAAACAGTCCACAGGCACCGTTCCTG...TCCTCCTGTGACATGTGAACAATGAAGAGGCCTGCGCCTCCTGCCTTGCCGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
CDS-3UTR CCA 90 bp GCCTTCCTCTGCGTGAGAGCAAAGGCTTTGCTCATCAGCCAGCCAGTCTTGTTAGTGGGACCCCGTTCCTaGAGGAAGACCCGCTTCAGT +
Preference number: 4 (lower is better)
Translates to: AFLCVRAKALLISQPVLLVGPRS*RKTRFS
Trigger: ACTGAAGCGGGTCTTCCTCCAGGAACGGGGTCCCAC...TAACAAGACTGGCTGGCTGATGAGCAAAGCCTTTGCTCTCACGCAGAGGAAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
CDS-3UTR CCA 90 bp AAAATAAAAGGCAGTTTCTTTGCTTTGCAGGCGGCAAGGCAGGAGGCGCAGGCCGTGGGACCCCGTTCCTaGAGGAAGACCCGCTTCAGT +
Preference number: 4 (lower is better)
Translates to: KIKGSFFALQAARQEAQAVGPRS*RKTRFS
Trigger: ACTGAAGCGGGTCTTCCTCCAGGAACGGGGTCCCAC...GGCCTGCGCCTCCTGCCTTGCCGCCTGCAAAGCAAAGAAACTGCCTTTTATTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
CDS-3UTR CCA 90 bp AAAATAAAAGGCAGTTTCTTTGCTTTGCAGGCGGCAAGGCAGGAGGCGCAGGCCGGACCTGACCATGCATaGGGCCCTAAAGGATCCCCG +
Preference number: 4 (lower is better)
Translates to: KIKGSFFALQAARQEAQAGPDHA*GPKGSP
Trigger: CGGGGATCCTTTAGGGCCCCATGCATGGTCAGGTCC...GGCCTGCGCCTCCTGCCTTGCCGCCTGCAAAGCAAAGAAACTGCCTTTTATTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000476258.5
CDS-3UTR TCA 90 bp GTACATCCAAGCCTTCCTCTGCGTGAGAGCAAAGGCTTTGCTCATCAGCCAGCCAGACCCGCTTCAGTGTaGTTGCCTCCCTTGCTTCAC +
Preference number: 4 (lower is better)
Translates to: VHPSLPLRESKGFAHQPARPASV*LPPLLH
Trigger: GTGAAGCAAGGGAGGCAATCACACTGAAGCGGGTCT...GGCTGGCTGATGAGCAAAGCCTTTGCTCTCACGCAGAGGAAGGCTTGGATGTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
CDS-3UTR TCA 90 bp GGAGGCGCAGGCCTCTTCATTGTTCACATGTCACAGGAGGAGGCTCTGAGCAAAACTCCGTGGAAGGAATaGATGGAGAGCAGCAGGGAC +
Preference number: 4 (lower is better)
Translates to: GGAGLFIVHMSQEEALSKTPWKE*MESSRD
Trigger: GTCCCTGCTGCTCTCCATTCATTCCTTCCACGGAGT...TTTGCTCAGAGCCTCCTCCTGTGACATGTGAACAATGAAGAGGCCTGCGCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476258.5
CDS-3UTR GCA 90 bp GCAGGCGGCAAGGCAGGAGGCGCAGGCCTCTTCATTGTTCACATGTCACAGGAGACTAGAAAACACTCATaGCATGGCCCACAGACCCAA +
Preference number: 4 (lower is better)
Translates to: AGGKAGGAGLFIVHMSQETRKHS*HGPQTQ
Trigger: TTGGGTCTGTGGGCCATGGCATGAGTGTTTTCTAGT...CTCCTGTGACATGTGAACAATGAAGAGGCCTGCGCCTCCTGCCTTGCCGCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
CDS-3UTR GCA 90 bp GGAGGCGCAGGCCTCTTCATTGTTCACATGTCACAGGAGGAGGCTCTGAGCAAAGCCTGGCAGGAACGGTaGCTGTGGACTGTTTATGGT +
Preference number: 4 (lower is better)
Translates to: GGAGLFIVHMSQEEALSKAWQER*LWTVYG
Trigger: ACCATAAACAGTCCACAGGCACCGTTCCTGCCAGGC...TTTGCTCAGAGCCTCCTCCTGTGACATGTGAACAATGAAGAGGCCTGCGCCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
CDS-3UTR GCA 90 bp GGCCTCTTCATTGTTCACATGTCACAGGAGGAGGCTCTGAGCAAAGGCCACTGGGCAGTTTCTTTGCTTTaGAGGCGGCAAGGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: GLFIVHMSQEEALSKGHWAVSLL*RRQGRR
Trigger: CCTCCTGCCTTGCCGCCTGCAAAGCAAAGAAACTGC...CCAGTGGCCTTTGCTCAGAGCCTCCTCCTGTGACATGTGAACAATGAAGAGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
CDS-3UTR GCA 90 bp ACCCCGTTCCTGGAGGAAGACCCGCTTCAGTGTGATTGCCTCCCTTGCTTCACTCCGCTTCAGTGTGATTaGCTCCCTTGCTTCACTGCT +
Preference number: 4 (lower is better)
Translates to: TPFLEEDPLQCDCLPCFTPLQCD*LPCFTA
Trigger: AGCAGTGAAGCAAGGGAGGCAATCACACTGAAGCGG...AGTGAAGCAAGGGAGGCAATCACACTGAAGCGGGTCTTCCTCCAGGAACGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
CDS-3UTR CCA 90 bp CATGCACACAGCATCAGGTTATTTAAAACAACACGCCTGTGGGACCCCGTTCCTGGACCCGAGGGGCGCTaGGAAACTCCACACCCAACA +
Preference number: 4 (lower is better)
Translates to: HAHSIRLFKTTRLWDPVPGPEGR*ETPHPT
Trigger: TGTTGGGTGTGGAGTTTCCCAGCGCCCCTCGGGTCC...AGGAACGGGGTCCCACAGGCGTGTTGTTTTAAATAACCTGATGCTGTGTGCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
CDS-3UTR CCA 90 bp TCCAATCTACTACTAGAAAACACTCATGCCATGGCCCACAGACCCAAGAGTCAATCTTCTGGATGGCACTaGGGCCGGGGCCACCGGGCT +
Preference number: 4 (lower is better)
Translates to: SNLLLENTHAMAHRPKSQSSGWH*GRGHRA
Trigger: AGCCCGGTGGCCCCGGCCCCAGTGCCATCCAGAAGA...TTGACTCTTGGGTCTGTGGGCCATGGCATGAGTGTTTTCTAGTAGTAGATTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
CDS-3UTR CCA 90 bp AGAAAACACTCATGCCATGGCCCACAGACCCAAGAGTCAAGGACAGAGAGAAACGGGATTTCTTCTGGATaGCACTGGGGCCGGGGCCAC +
Preference number: 4 (lower is better)
Translates to: RKHSCHGPQTQESRTERNGISSG*HWGRGH
Trigger: GTGGCCCCGGCCCCAGTGCCATCCAGAAGAAATCCC...GTTTCTCTCTGTCCTTGACTCTTGGGTCTGTGGGCCATGGCATGAGTGTTTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000470924.5
ENST00000476258.5
ENST00000482348.5
CDS-3UTR CCA 90 bp GAAAACACTCATGCCATGGCCCACAGACCCAAGAGTCAAGGACAGAGAGAAACCAACCCAAGACGAGGCTaGACTTGCCGCCAGGGGGAT +
Preference number: 4 (lower is better)
Translates to: ENTHAMAHRPKSQGQRETNPRRG*TCRQGD
Trigger: ATCCCCCTGGCGGCAAGTCCAGCCTCGTCTTGGGTT...GGTTTCTCTCTGTCCTTGACTCTTGGGTCTGTGGGCCATGGCATGAGTGTTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000470924.5
ENST00000476258.5
ENST00000482348.5
CDS-3UTR CCA 90 bp CTACTACTAGAAAACACTCATGCCATGGCCCACAGACCCAAGAGTCAAGGACAGGGTCTCCGGATCCAATaGCTGCGCGCGAGAGCGAGA +
Preference number: 4 (lower is better)
Translates to: LLLENTHAMAHRPKSQGQGLRIQ*LRARAR
Trigger: TCTCGCTCTCGCGCGCAGCCATTGGATCCGGAGACC...CTGTCCTTGACTCTTGGGTCTGTGGGCCATGGCATGAGTGTTTTCTAGTAGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476258.5
CDS-3UTR TCA 90 bp GGCAAGGCAGGAGGCGCAGGCCTCTTCATTGTTCACATGTCACAGGAGGAGGCTTATGGTCTGTCCAGTTaGGGCTTGGTAAACCCAAGT +
Preference number: 4 (lower is better)
Translates to: GKAGGAGLFIVHMSQEEAYGLSS*GLVNPS
Trigger: ACTTGGGTTTACCAAGCCTCAACTGGACAGACCATA...AGCCTCCTCCTGTGACATGTGAACAATGAAGAGGCCTGCGCCTCCTGCCTTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
CDS-3UTR TCA 90 bp GCAAGGCAGGAGGCGCAGGCCTCTTCATTGTTCACATGTCACAGGAGGAGGCTCCAGTGTGCAATTAGCTaGGACAATGTGGACACCTTC +
Preference number: 4 (lower is better)
Translates to: ARQEAQASSLFTCHRRRLQCAIS*DNVDTF
Trigger: GAAGGTGTCCACATTGTCTCAGCTAATTGCACACTG...GAGCCTCCTCCTGTGACATGTGAACAATGAAGAGGCCTGCGCCTCCTGCCTTGC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476258.5
ENST00000482348.5
CDS-3UTR GCA 90 bp CTGAGCAAAGGCCACTGGCAAGTTAGGGCAACACCAAGAAGGCTCTGCGGAGAGGAAGTCTCCGGAGCTTaGTTCAGAGGAGTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: LSKGHWQVRATPRRLCGEEVSGA*FRGVPS
Trigger: AGAAGGAACTCCTCTGAAGCAAGCTCCGGAGACTTC...CTCTCCGCAGAGCCTTCTTGGTGTTGCCCTAACTTGCCAGTGGCCTTTGCTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
CDS-3UTR GCA 90 bp CACTGGCAAGTTAGGGCAACACCAAGAAGGCTCTGCGGAGAGACTCCCTGTGGGACTAGAAAACACTCATaGCATGGCCCACAGACCCAA +
Preference number: 4 (lower is better)
Translates to: HWQVRATPRRLCGETPCGTRKHS*HGPQTQ
Trigger: TTGGGTCTGTGGGCCATGGCATGAGTGTTTTCTAGT...CCCACAGGGAGTCTCTCCGCAGAGCCTTCTTGGTGTTGCCCTAACTTGCCAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
CDS-3UTR GCA 90 bp AAAATAAAAGGCAGTTTCTTTGCTTTGCAGGCGGCAAGGCAGGAGGCGCAGGCCGCCTGGCAGGAACGGTaGCTGTGGACTGTTTATGGT +
Preference number: 4 (lower is better)
Translates to: KIKGSFFALQAARQEAQAAWQER*LWTVYG
Trigger: ACCATAAACAGTCCACAGGCACCGTTCCTGCCAGGC...GGCCTGCGCCTCCTGCCTTGCCGCCTGCAAAGCAAAGAAACTGCCTTTTATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
CDS-3UTR GCA 90 bp TACATCCAAGCCTTCCTCTGCGTGAGAGCAAAGGCTTTGCTCATCAGCCAGCCAGCAGTTTCTTTGCTTTaGAGGCGGCAAGGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: YIQAFLCVRAKALLISQPAVSLL*RRQGRR
Trigger: CCTCCTGCCTTGCCGCCTGCAAAGCAAAGAAACTGC...TGGCTGGCTGATGAGCAAAGCCTTTGCTCTCACGCAGAGGAAGGCTTGGATGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
CDS-3UTR GCA 90 bp GGACCCCGTTCCTGGAGGAAGACCCGCTTCAGTGTGATTGCCTCCCTTGCTTCAAAAAGGCAGTTTCTTTaGTTTGCAGGCGGCAAGGCA +
Preference number: 4 (lower is better)
Translates to: GPRSWRKTRFSVIASLASKRQFL*FAGGKA
Trigger: TGCCTTGCCGCCTGCAAAGCAAAGAAACTGCCTTTT...TGAAGCAAGGGAGGCAATCACACTGAAGCGGGTCTTCCTCCAGGAACGGGGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
CDS-3UTR GCA 90 bp GCAGGCGGCAAGGCAGGAGGCGCAGGCCTCTTCATTGTTCACATGTCACAGGAGTGTGATTGCCTCCCTTaGTTCACTGCTTTTAGTTCC +
Preference number: 4 (lower is better)
Translates to: AGGKAGGAGLFIVHMSQECDCLP*FTAFSS
Trigger: GGAACTAAAAGCAGTGAAGCAAGGGAGGCAATCACA...CTCCTGTGACATGTGAACAATGAAGAGGCCTGCGCCTCCTGCCTTGCCGCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
CDS-3UTR GCA 90 bp GGCGGCAAGGCAGGAGGCGCAGGCCTCTTCATTGTTCACATGTCACAGGAGGAGTGTGATTGCCTCCCTTaGTTCACTGCTTTTAGTTCC +
Preference number: 4 (lower is better)
Translates to: GGKAGGAGLFIVHMSQEECDCLP*FTAFSS
Trigger: GGAACTAAAAGCAGTGAAGCAAGGGAGGCAATCACA...CTCCTCCTGTGACATGTGAACAATGAAGAGGCCTGCGCCTCCTGCCTTGCCGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
CDS-3UTR GCA 90 bp GGAACGGTGCCTGTGGACTGTTTATGGTCTGTCCAGTTGAGGCTTGGTAAACCCATGCACCAGCCGGGATaGACACAGGAGAAAGCGAAG +
Preference number: 4 (lower is better)
Translates to: GTVPVDCLWSVQLRLGKPMHQPG*TQEKAK
Trigger: CTTCGCTTTCTCCTGTGTGCATCCCGGCTGGTGCAT...GGGTTTACCAAGCCTCAACTGGACAGACCATAAACAGTCCACAGGCACCGTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476258.5
CDS-3UTR GCA 90 bp AAGACCCGCTTCAGTGTGATTGCCTCCCTTGCTTCACTGCTTTTAGTTCCAGGCAAATGGCTCCCTTTGTaGCACTTGGCCAGGACCCCG +
Preference number: 4 (lower is better)
Translates to: KTRFSVIASLASLLLVPGKWLPL*HLARTP
Trigger: CGGGGTCCTGGCCAAGTGGCACAAAGGGAGCCATTT...GCCTGGAACTAAAAGCAGTGAAGCAAGGGAGGCAATCACACTGAAGCGGGTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482348.5
CDS-3UTR CCA 90 bp TCTACTACTAGAAAACACTCATGCCATGGCCCACAGACCCAAGAGTCAAGGACAGGACCCGAGGGGCGCTaGGAAACTCCACACCCAACA +
Preference number: 4 (lower is better)
Translates to: STTRKHSCHGPQTQESRTGPEGR*ETPHPT
Trigger: TGTTGGGTGTGGAGTTTCCCAGCGCCCCTCGGGTCC...TGTCCTTGACTCTTGGGTCTGTGGGCCATGGCATGAGTGTTTTCTAGTAGTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
CDS-3UTR CCA 90 bp GGCCTCTTCATTGTTCACATGTCACAGGAGGAGGCTCTGAGCAAAGGCCACTGGCTGAGCAAAGGCCACTaGCAAGTTAGGGCAACACCA +
Preference number: 4 (lower is better)
Translates to: GLFIVHMSQEEALSKGHWLSKGH*QVRATP
Trigger: TGGTGTTGCCCTAACTTGCCAGTGGCCTTTGCTCAG...CCAGTGGCCTTTGCTCAGAGCCTCCTCCTGTGACATGTGAACAATGAAGAGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
CDS-3UTR CCA 90 bp CGTTCCTGGAGGAAGACCCGCTTCAGTGTGATTGCCTCCCTTGCTTCACTGCTTAGAGACAGGAGCGCGTaGCCCATCAATGGGACAATA +
Preference number: 4 (lower is better)
Translates to: RSWRKTRFSVIASLASLLRDRSA*PINGTI
Trigger: TATTGTCCCATTGATGGGCCACGCGCTCCTGTCTCT...AAGCAGTGAAGCAAGGGAGGCAATCACACTGAAGCGGGTCTTCCTCCAGGAACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476258.5
CDS-3UTR TCA 90 bp GGCGCAGGCCTCTTCATTGTTCACATGTCACAGGAGGAGGCTCTGAGCAAAGGCTATGGTCTGTCCAGTTaGGGCTTGGTAAACCCAAGT +
Preference number: 4 (lower is better)
Translates to: GAGLFIVHMSQEEALSKGYGLSS*GLVNPS
Trigger: ACTTGGGTTTACCAAGCCTCAACTGGACAGACCATA...GCCTTTGCTCAGAGCCTCCTCCTGTGACATGTGAACAATGAAGAGGCCTGCGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
CDS-3UTR TCA 90 bp ATCAGGTTATTTAAAACAACACGCCTGTGGGACCCCGTTCCTGGAGGAAGACCCAGACCCGCTTCAGTGTaGTTGCCTCCCTTGCTTCAC +
Preference number: 4 (lower is better)
Translates to: IRLFKTTRLWDPVPGGRPRPASV*LPPLLH
Trigger: GTGAAGCAAGGGAGGCAATCACACTGAAGCGGGTCT...GGGTCTTCCTCCAGGAACGGGGTCCCACAGGCGTGTTGTTTTAAATAACCTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
CDS-3UTR TCA 90 bp ACCCCGTTCCTGGAGGAAGACCCGCTTCAGTGTGATTGCCTCCCTTGCTTCACTCTAAGGCTCAATTGCTaGGTGAGGCGTGCTTTTTGT +
Preference number: 4 (lower is better)
Translates to: TPFLEEDPLQCDCLPCFTLRLNC*VRRAFC
Trigger: ACAAAAAGCACGCCTCACTCAGCAATTGAGCCTTAG...AGTGAAGCAAGGGAGGCAATCACACTGAAGCGGGTCTTCCTCCAGGAACGGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482348.5
CDS-3UTR GCA 90 bp CTGCGTGAGAGCAAAGGCTTTGCTCATCAGCCAGCCAGTCTTGTTACTATCTGGGAGTGCCAAGCACCATaGGGCATTACGATGGGCTGT +
Preference number: 4 (lower is better)
Translates to: LRESKGFAHQPASLVTIWECQAP*GITMGC
Trigger: ACAGCCCATCGTAATGCCGCATGGTGCTTGGCACTC...CCAGATAGTAACAAGACTGGCTGGCTGATGAGCAAAGCCTTTGCTCTCACGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304834.11
ENST00000356033.8
CDS-3UTR GCA 90 bp TATTTAAAACAACACGCCTGTGGGACCCCGTTCCTGGAGGAAGACCCGCTTCAGATTGGCTCTCTGGAGTaGCAAGCACCATGCGGCATT +
Preference number: 4 (lower is better)
Translates to: YLKQHACGTPFLEEDPLQIGSLE*QAPCGI
Trigger: AATGCCGCATGGTGCTTGGCACTCCAGAGAGCCAAT...CTGAAGCGGGTCTTCCTCCAGGAACGGGGTCCCACAGGCGTGTTGTTTTAAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304834.11
ENST00000356033.8
CDS-3UTR CCA 90 bp GAGCAAAGGCTTTGCTCATCAGCCAGCCAGTCTTGTTACTATCTGGCTACTTTTCATGCGGCATTACGATaGGCTGTGGCGGCCACGGCT +
Preference number: 4 (lower is better)
Translates to: EQRLCSSASQSCYYLATFHAALR*AVAATA
Trigger: AGCCGTGGCCGCCACAGCCCATCGTAATGCCGCATG...AAAAGTAGCCAGATAGTAACAAGACTGGCTGGCTGATGAGCAAAGCCTTTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304834.11
ENST00000356033.8
CDS-3UTR CCA 90 bp TCTACTACTAGAAAACACTCATGCCATGGCCCACAGACCCAAGAGTCAAGGACAAACCCAAGACGAGGCTaGACTTGCCGCCAGGGGGAT +
Preference number: 4 (lower is better)
Translates to: STTRKHSCHGPQTQESRTNPRRG*TCRQGD
Trigger: ATCCCCCTGGCGGCAAGTCCAGCCTCGTCTTGGGTT...TGTCCTTGACTCTTGGGTCTGTGGGCCATGGCATGAGTGTTTTCTAGTAGTAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000470924.5
ENST00000476258.5
ENST00000482348.5
CDS-3UTR CCA 90 bp GGCCTCTTCATTGTTCACATGTCACAGGAGGAGGCTCTGAGCAAAGGCCACTGGAAAACACTCATGCCATaGCCCACAGACCCAAGAGTC +
Preference number: 4 (lower is better)
Translates to: GLFIVHMSQEEALSKGHWKTLMP*PTDPRV
Trigger: GACTCTTGGGTCTGTGGGCCATGGCATGAGTGTTTT...CCAGTGGCCTTTGCTCAGAGCCTCCTCCTGTGACATGTGAACAATGAAGAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
CDS-3UTR CCA 90 bp GTACATCCAAGCCTTCCTCTGCGTGAGAGCAAAGGCTTTGCTCATCAGCCAGCCAAAACACTCATGCCATaGCCCACAGACCCAAGAGTC +
Preference number: 4 (lower is better)
Translates to: VHPSLPLRESKGFAHQPAKTLMP*PTDPRV
Trigger: GACTCTTGGGTCTGTGGGCCATGGCATGAGTGTTTT...GGCTGGCTGATGAGCAAAGCCTTTGCTCTCACGCAGAGGAAGGCTTGGATGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
CDS-3UTR CCA 90 bp TATTTAAAACAACACGCCTGTGGGACCCCGTTCCTGGAGGAAGACCCGCTTCAGCAGGAACGGTGCCTGTaGACTGTTTATGGTCTGTCC +
Preference number: 4 (lower is better)
Translates to: YLKQHACGTPFLEEDPLQQERCL*TVYGLS
Trigger: GGACAGACCATAAACAGTCCACAGGCACCGTTCCTG...CTGAAGCGGGTCTTCCTCCAGGAACGGGGTCCCACAGGCGTGTTGTTTTAAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
CDS-3UTR CCA 90 bp GTTTCATTGTACATCCAAGCCTTCCTCTGCGTGAGAGCAAAGGCTTTGCTCATCGTGGGACCCCGTTCCTaGAGGAAGACCCGCTTCAGT +
Preference number: 4 (lower is better)
Translates to: VSLYIQAFLCVRAKALLIVGPRS*RKTRFS
Trigger: ACTGAAGCGGGTCTTCCTCCAGGAACGGGGTCCCAC...GATGAGCAAAGCCTTTGCTCTCACGCAGAGGAAGGCTTGGATGTACAATGAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
CDS-3UTR CCA 90 bp GGACCCCGTTCCTGGAGGAAGACCCGCTTCAGTGTGATTGCCTCCCTTGCTTCAGAGACTTTCCTTTCATaGTCAAGCACCAGCATCATG +
Preference number: 4 (lower is better)
Translates to: GPRSWRKTRFSVIASLASETFLS*SSTSIM
Trigger: CATGATGCTGGTGCTTGACCATGAAAGGAAAGTCTC...TGAAGCAAGGGAGGCAATCACACTGAAGCGGGTCTTCCTCCAGGAACGGGGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
CDS-3UTR CCA 90 bp CTCCAATCTACTACTAGAAAACACTCATGCCATGGCCCACAGACCCAAGAGTCAGGTCCGAATAAGGAGTaGGGGCACGGCGAGGGTAAG +
Preference number: 4 (lower is better)
Translates to: LQSTTRKHSCHGPQTQESGPNKE*GHGEGK
Trigger: CTTACCCTCGCCGTGCCCCCACTCCTTATTCGGACC...TGACTCTTGGGTCTGTGGGCCATGGCATGAGTGTTTTCTAGTAGTAGATTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476258.5
CDS-3UTR CCA 90 bp CATGCACACAGCATCAGGTTATTTAAAACAACACGCCTGTGGGACCCCGTTCCTCGTGGAAGGAATGAATaGAGAGCAGCAGGGACCCGG +
Preference number: 4 (lower is better)
Translates to: HAHSIRLFKTTRLWDPVPRGRNE*RAAGTR
Trigger: CCGGGTCCCTGCTGCTCTCCATTCATTCCTTCCACG...AGGAACGGGGTCCCACAGGCGTGTTGTTTTAAATAACCTGATGCTGTGTGCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476258.5
CDS-3UTR CCA 90 bp GCCCACAGACCCAAGAGTCAAGGACAGAGAGAAACCTGTTCTTCAAAAGAAAAAAAAACCCACTCGGGTTaGCTCGTTCCCCGCGCCCGC +
Preference number: 4 (lower is better)
Translates to: AHRPKSQGQRETCSSKEKKTHSG*LVPRAR
Trigger: GCGGGCGCGGGGAACGAGCCAACCCGAGTGGGTTTT...TTTTTCTTTTGAAGAACAGGTTTCTCTCTGTCCTTGACTCTTGGGTCTGTGGGC
53% GC, longest homopolymer 9 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000476258.5
CDS-3UTR CCA 90 bp GCAGGCGGCAAGGCAGGAGGCGCAGGCCTCTTCATTGTTCACATGTCACAGGAGAACCCCTGTGAGATATaGCTATTTCACGTGTCTTCT +
Preference number: 4 (lower is better)
Translates to: AGGKAGGAGLFIVHMSQENPCEI*LFHVSS
Trigger: AGAAGACACGTGAAATAGCCATATCTCACAGGGGTT...CTCCTGTGACATGTGAACAATGAAGAGGCCTGCGCCTCCTGCCTTGCCGCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482348.5
CDS-3UTR GCA 90 bp CACAGCATCAGGTTATTTAAAACAACACGCCTGTGGGACCCCGTTCCTGGAGGAATTGGCTCTCTGGAGTaGCAAGCACCATGCGGCATT +
Preference number: 4 (lower is better)
Translates to: HSIRLFKTTRLWDPVPGGIGSLE*QAPCGI
Trigger: AATGCCGCATGGTGCTTGGCACTCCAGAGAGCCAAT...TCCTCCAGGAACGGGGTCCCACAGGCGTGTTGTTTTAAATAACCTGATGCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304834.11
ENST00000356033.8
CDS-3UTR GCA 90 bp CACAGCATCAGGTTATTTAAAACAACACGCCTGTGGGACCCCGTTCCTGGAGGACCGCTTCAGTGTGATTaGCTCCCTTGCTTCACTGCT +
Preference number: 4 (lower is better)
Translates to: HSIRLFKTTRLWDPVPGGPLQCD*LPCFTA
Trigger: AGCAGTGAAGCAAGGGAGGCAATCACACTGAAGCGG...TCCTCCAGGAACGGGGTCCCACAGGCGTGTTGTTTTAAATAACCTGATGCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
CDS-3UTR GCA 90 bp ATCAGGTTATTTAAAACAACACGCCTGTGGGACCCCGTTCCTGGAGGAAGACCCCCGCTTCAGTGTGATTaGCTCCCTTGCTTCACTGCT +
Preference number: 4 (lower is better)
Translates to: IRLFKTTRLWDPVPGGRPPLQCD*LPCFTA
Trigger: AGCAGTGAAGCAAGGGAGGCAATCACACTGAAGCGG...GGGTCTTCCTCCAGGAACGGGGTCCCACAGGCGTGTTGTTTTAAATAACCTGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
CDS-3UTR GCA 90 bp CGTGAGAGCAAAGGCTTTGCTCATCAGCCAGCCAGTCTTGTTACTATCTGGCTAGAAGCGAAGGTAGGATaGAAAGGCCACGGTCCGAAG +
Preference number: 4 (lower is better)
Translates to: RESKGFAHQPASLVTIWLEAKVG*KGHGPK
Trigger: CTTCGGACCGTGGCCTTTGCATCCTACCTTCGCTTC...TAGCCAGATAGTAACAAGACTGGCTGGCTGATGAGCAAAGCCTTTGCTCTCACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476258.5
CDS-3UTR CCA 90 bp GAGCAAAGGCTTTGCTCATCAGCCAGCCAGTCTTGTTACTATCTGGCTACTTTTAACCCAAGACGAGGCTaGACTTGCCGCCAGGGGGAT +
Preference number: 4 (lower is better)
Translates to: EQRLCSSASQSCYYLATFNPRRG*TCRQGD
Trigger: ATCCCCCTGGCGGCAAGTCCAGCCTCGTCTTGGGTT...AAAAGTAGCCAGATAGTAACAAGACTGGCTGGCTGATGAGCAAAGCCTTTGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
CDS-3UTR CCA 90 bp GAAAACACTCATGCCATGGCCCACAGACCCAAGAGTCAAGGACAGAGAGAAACCCAGGAACGGTGCCTGTaGACTGTTTATGGTCTGTCC +
Preference number: 4 (lower is better)
Translates to: ENTHAMAHRPKSQGQRETQERCL*TVYGLS
Trigger: GGACAGACCATAAACAGTCCACAGGCACCGTTCCTG...GGTTTCTCTCTGTCCTTGACTCTTGGGTCTGTGGGCCATGGCATGAGTGTTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
CDS-3UTR CCA 90 bp GAGCAAAGGCTTTGCTCATCAGCCAGCCAGTCTTGTTACTATCTGGCTACTTTTGTGGGACCCCGTTCCTaGAGGAAGACCCGCTTCAGT +
Preference number: 4 (lower is better)
Translates to: EQRLCSSASQSCYYLATFVGPRS*RKTRFS
Trigger: ACTGAAGCGGGTCTTCCTCCAGGAACGGGGTCCCAC...AAAAGTAGCCAGATAGTAACAAGACTGGCTGGCTGATGAGCAAAGCCTTTGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
CDS-3UTR CCA 90 bp CTACTAGAAAACACTCATGCCATGGCCCACAGACCCAAGAGTCAAGGACAGAGAAAAACAACACGCCTGTaGGACCCCGTTCCTGGAGGA +
Preference number: 4 (lower is better)
Translates to: LLENTHAMAHRPKSQGQRKTTRL*DPVPGG
Trigger: TCCTCCAGGAACGGGGTCCCACAGGCGTGTTGTTTT...TCTCTGTCCTTGACTCTTGGGTCTGTGGGCCATGGCATGAGTGTTTTCTAGTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
CDS-3UTR CCA 90 bp AGAAAACACTCATGCCATGGCCCACAGACCCAAGAGTCAAGGACAGAGAGAAACAAAACAACACGCCTGTaGGACCCCGTTCCTGGAGGA +
Preference number: 4 (lower is better)
Translates to: RKHSCHGPQTQESRTERNKTTRL*DPVPGG
Trigger: TCCTCCAGGAACGGGGTCCCACAGGCGTGTTGTTTT...GTTTCTCTCTGTCCTTGACTCTTGGGTCTGTGGGCCATGGCATGAGTGTTTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
CDS-3UTR CCA 90 bp GGCGCAGGCCTCTTCATTGTTCACATGTCACAGGAGGAGGCTCTGAGCAAAGGCGAGACTTTCCTTTCATaGTCAAGCACCAGCATCATG +
Preference number: 4 (lower is better)
Translates to: GAGLFIVHMSQEEALSKGETFLS*SSTSIM
Trigger: CATGATGCTGGTGCTTGACCATGAAAGGAAAGTCTC...GCCTTTGCTCAGAGCCTCCTCCTGTGACATGTGAACAATGAAGAGGCCTGCGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
CDS-3UTR CCA 90 bp CATCATGCACACAGCATCAGGTTATTTAAAACAACACGCCTGTGGGACCCCGTTCGATTGGGTCCTCAATaGGGGGTGAAGGGTCGCGAT +
Preference number: 4 (lower is better)
Translates to: HHAHSIRLFKTTRLWDPVRLGPQ*GVKGRD
Trigger: ATCGCGACCCTTCACCCCCCATTGAGGACCCAATCG...AACGGGGTCCCACAGGCGTGTTGTTTTAAATAACCTGATGCTGTGTGCATGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000476258.5
CDS-3UTR TCA 90 bp ATCATGCACACAGCATCAGGTTATTTAAAACAACACGCCTGTGGGACCCCGTTCAGACCCGCTTCAGTGTaGTTGCCTCCCTTGCTTCAC +
Preference number: 4 (lower is better)
Translates to: IMHTASGYLKQHACGTPFRPASV*LPPLLH
Trigger: GTGAAGCAAGGGAGGCAATCACACTGAAGCGGGTCT...GAACGGGGTCCCACAGGCGTGTTGTTTTAAATAACCTGATGCTGTGTGCATGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
CDS-3UTR TCA 90 bp TCCAATCTACTACTAGAAAACACTCATGCCATGGCCCACAGACCCAAGAGTCAAAACCAGGGCCAGGGATaGACTCACTGGGCAAACGTC +
Preference number: 4 (lower is better)
Translates to: SNLLLENTHAMAHRPKSQNQGQG*THWANV
Trigger: GACGTTTGCCCAGTGAGTTCATCCCTGGCCCTGGTT...TTGACTCTTGGGTCTGTGGGCCATGGCATGAGTGTTTTCTAGTAGTAGATTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476258.5
CDS-3UTR GCA 90 bp AAAATAAAAGGCAGTTTCTTTGCTTTGCAGGCGGCAAGGCAGGAGGCGCAGGCCACTAGAAAACACTCATaGCATGGCCCACAGACCCAA +
Preference number: 4 (lower is better)
Translates to: KIKGSFFALQAARQEAQATRKHS*HGPQTQ
Trigger: TTGGGTCTGTGGGCCATGGCATGAGTGTTTTCTAGT...GGCCTGCGCCTCCTGCCTTGCCGCCTGCAAAGCAAAGAAACTGCCTTTTATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
CDS-3UTR GCA 90 bp CATGGCCCACAGACCCAAGAGTCAAGGACAGAGAGAAACCTGTTCTTCAAAAGAGCCTGGCAGGAACGGTaGCTGTGGACTGTTTATGGT +
Preference number: 4 (lower is better)
Translates to: HGPQTQESRTERNLFFKRAWQER*LWTVYG
Trigger: ACCATAAACAGTCCACAGGCACCGTTCCTGCCAGGC...TCTTTTGAAGAACAGGTTTCTCTCTGTCCTTGACTCTTGGGTCTGTGGGCCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
CDS-3UTR GCA 90 bp CTTTTAGTTCCAGGCAGTTTCATTGTACATCCAAGCCTTCCTCTGCGTGAGAGCGCAGTTTCTTTGCTTTaGAGGCGGCAAGGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: LLVPGSFIVHPSLPLRESAVSLL*RRQGRR
Trigger: CCTCCTGCCTTGCCGCCTGCAAAGCAAAGAAACTGC...GCTCTCACGCAGAGGAAGGCTTGGATGTACAATGAAACTGCCTGGAACTAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
CDS-3UTR GCA 90 bp CTCTGCGTGAGAGCAAAGGCTTTGCTCATCAGCCAGCCAGTCTTGTTACTATCTCCGCTTCAGTGTGATTaGCTCCCTTGCTTCACTGCT +
Preference number: 4 (lower is better)
Translates to: LCVRAKALLISQPVLLLSPLQCD*LPCFTA
Trigger: AGCAGTGAAGCAAGGGAGGCAATCACACTGAAGCGG...AGATAGTAACAAGACTGGCTGGCTGATGAGCAAAGCCTTTGCTCTCACGCAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
CDS-3UTR GCA 90 bp CATGCACACAGCATCAGGTTATTTAAAACAACACGCCTGTGGGACCCCGTTCCTCCGCTTCAGTGTGATTaGCTCCCTTGCTTCACTGCT +
Preference number: 4 (lower is better)
Translates to: HAHSIRLFKTTRLWDPVPPLQCD*LPCFTA
Trigger: AGCAGTGAAGCAAGGGAGGCAATCACACTGAAGCGG...AGGAACGGGGTCCCACAGGCGTGTTGTTTTAAATAACCTGATGCTGTGTGCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
CDS-3UTR CCA 90 bp ACTCATGCCATGGCCCACAGACCCAAGAGTCAAGGACAGAGAGAAACCTGTTCTAAAACACTCATGCCATaGCCCACAGACCCAAGAGTC +
Preference number: 4 (lower is better)
Translates to: THAMAHRPKSQGQRETCSKTLMP*PTDPRV
Trigger: GACTCTTGGGTCTGTGGGCCATGGCATGAGTGTTTT...AGAACAGGTTTCTCTCTGTCCTTGACTCTTGGGTCTGTGGGCCATGGCATGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000470924.5
ENST00000476258.5
ENST00000482348.5
CDS-3UTR CCA 90 bp CTCTGCGTGAGAGCAAAGGCTTTGCTCATCAGCCAGCCAGTCTTGTTACTATCTCAGGAACGGTGCCTGTaGACTGTTTATGGTCTGTCC +
Preference number: 4 (lower is better)
Translates to: LCVRAKALLISQPVLLLSQERCL*TVYGLS
Trigger: GGACAGACCATAAACAGTCCACAGGCACCGTTCCTG...AGATAGTAACAAGACTGGCTGGCTGATGAGCAAAGCCTTTGCTCTCACGCAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
CDS-3UTR CCA 90 bp CATGCACACAGCATCAGGTTATTTAAAACAACACGCCTGTGGGACCCCGTTCCTCTGAGCAAAGGCCACTaGCAAGTTAGGGCAACACCA +
Preference number: 4 (lower is better)
Translates to: HAHSIRLFKTTRLWDPVPLSKGH*QVRATP
Trigger: TGGTGTTGCCCTAACTTGCCAGTGGCCTTTGCTCAG...AGGAACGGGGTCCCACAGGCGTGTTGTTTTAAATAACCTGATGCTGTGTGCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
CDS-3UTR CCA 90 bp CTTTTAGTTCCAGGCAGTTTCATTGTACATCCAAGCCTTCCTCTGCGTGAGAGCAAAACAACACGCCTGTaGGACCCCGTTCCTGGAGGA +
Preference number: 4 (lower is better)
Translates to: LLVPGSFIVHPSLPLRESKTTRL*DPVPGG
Trigger: TCCTCCAGGAACGGGGTCCCACAGGCGTGTTGTTTT...GCTCTCACGCAGAGGAAGGCTTGGATGTACAATGAAACTGCCTGGAACTAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
3UTR CAA 72 bp TACATCCAAGCCTTCCTCTGCGTGAGAGCAAAGGCTTaGCTCATCAGCCAGCCAGTCTTGTTACTATCTGGC +
Preference number: 4 (lower is better)
Translates to: YIQAFLCVRAKA*LISQPVLLLSG
Trigger: GCCAGATAGTAACAAGACTGGCTGGCTGATGAGCAAAGCCTTTGCTCTCACGCAGAGGAAGGCTTGGATGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
CDS-3UTR TCA 90 bp TGCTTCACTGCTTTTAGTTCCAGGCAGTTTCATTGTACATCCAAGCCTTCCTCTTGGGGTCGACTCCCTTaGAGGTGGTGGTTGTGGTCA +
Preference number: 4 (lower is better)
Translates to: CFTAFSSRQFHCTSKPSSWGRLP*RWWLWS
Trigger: TGACCACAACCACCACCTTCAAGGGAGTCGACCCCA...AGAGGAAGGCTTGGATGTACAATGAAACTGCCTGGAACTAAAAGCAGTGAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
CDS-3UTR TCA 90 bp GGCGCAGGCCTCTTCATTGTTCACATGTCACAGGAGGAGGCTCTGAGCAAAGGCTGGATATTGTTTACTTaGAGCAACAGTCCAGGATTG +
Preference number: 4 (lower is better)
Translates to: GAGLFIVHMSQEEALSKGWILFT*SNSPGL
Trigger: CAATCCTGGACTGTTGCTTCAAGTAAACAATATCCA...GCCTTTGCTCAGAGCCTCCTCCTGTGACATGTGAACAATGAAGAGGCCTGCGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409753.8
ENST00000476258.5
CDS-3UTR TCA 90 bp ACTCATGCCATGGCCCACAGACCCAAGAGTCAAGGACAGAGAGAAACCTGTTCTCAGTGTGCAATTAGCTaGGACAATGTGGACACCTTC +
Preference number: 4 (lower is better)
Translates to: THAMAHRPKSQGQRETCSQCAIS*DNVDTF
Trigger: GAAGGTGTCCACATTGTCTCAGCTAATTGCACACTG...AGAACAGGTTTCTCTCTGTCCTTGACTCTTGGGTCTGTGGGCCATGGCATGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476258.5
ENST00000482348.5
CDS-3UTR TCA 90 bp ATCAGGTTATTTAAAACAACACGCCTGTGGGACCCCGTTCCTGGAGGAAGACCCGAGGGTAGCCACACATaGATGCAGGTCATAATCGAT +
Preference number: 4 (lower is better)
Translates to: IRLFKTTRLWDPVPGGRPEGSHT*MQVIID
Trigger: ATCGATTATGACCTGCATTCATGTGTGGCTACCCTC...GGGTCTTCCTCCAGGAACGGGGTCCCACAGGCGTGTTGTTTTAAATAACCTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482348.5
CDS-3UTR GCA 90 bp CTACTAGAAAACACTCATGCCATGGCCCACAGACCCAAGAGTCAAGGACAGAGAGAAGTCTCCGGAGCTTaGTTCAGAGGAGTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: LLENTHAMAHRPKSQGQREVSGA*FRGVPS
Trigger: AGAAGGAACTCCTCTGAAGCAAGCTCCGGAGACTTC...TCTCTGTCCTTGACTCTTGGGTCTGTGGGCCATGGCATGAGTGTTTTCTAGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000470924.5
ENST00000476258.5
ENST00000482348.5
CDS-3UTR GCA 90 bp AGCTTTCCCTCCAATCTACTACTAGAAAACACTCATGCCATGGCCCACAGACCCGAAGTCTCCGGAGCTTaGTTCAGAGGAGTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: SFPSNLLLENTHAMAHRPEVSGA*FRGVPS
Trigger: AGAAGGAACTCCTCTGAAGCAAGCTCCGGAGACTTC...GGGTCTGTGGGCCATGGCATGAGTGTTTTCTAGTAGTAGATTGGAGGGAAAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
CDS-3UTR GCA 90 bp CTTCCTCTGCGTGAGAGCAAAGGCTTTGCTCATCAGCCAGCCAGTCTTGTTACTACTAGAAAACACTCATaGCATGGCCCACAGACCCAA +
Preference number: 4 (lower is better)
Translates to: LPLRESKGFAHQPASLVTTRKHS*HGPQTQ
Trigger: TTGGGTCTGTGGGCCATGGCATGAGTGTTTTCTAGT...AGTAACAAGACTGGCTGGCTGATGAGCAAAGCCTTTGCTCTCACGCAGAGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
CDS-3UTR GCA 90 bp CCTCTGCGTGAGAGCAAAGGCTTTGCTCATCAGCCAGCCAGTCTTGTTACTATCACTAGAAAACACTCATaGCATGGCCCACAGACCCAA +
Preference number: 4 (lower is better)
Translates to: PLRESKGFAHQPASLVTITRKHS*HGPQTQ
Trigger: TTGGGTCTGTGGGCCATGGCATGAGTGTTTTCTAGT...GATAGTAACAAGACTGGCTGGCTGATGAGCAAAGCCTTTGCTCTCACGCAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
CDS-3UTR GCA 90 bp CACAGCATCAGGTTATTTAAAACAACACGCCTGTGGGACCCCGTTCCTGGAGGAAAAAGGCAGTTTCTTTaGTTTGCAGGCGGCAAGGCA +
Preference number: 4 (lower is better)
Translates to: HSIRLFKTTRLWDPVPGGKRQFL*FAGGKA
Trigger: TGCCTTGCCGCCTGCAAAGCAAAGAAACTGCCTTTT...TCCTCCAGGAACGGGGTCCCACAGGCGTGTTGTTTTAAATAACCTGATGCTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
CDS-3UTR GCA 90 bp ACAGAACGACAGCGTTCAGGACAGTCAGAGCTAACCCAAGACGAGGCTGGACTTTGTGATTGCCTCCCTTaGTTCACTGCTTTTAGTTCC +
Preference number: 4 (lower is better)
Translates to: TERQRSGQSELTQDEAGLCDCLP*FTAFSS
Trigger: GGAACTAAAAGCAGTGAAGCAAGGGAGGCAATCACA...AAGTCCAGCCTCGTCTTGGGTTAGCTCTGACTGTCCTGAACGCTGTCGTTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304834.11
CDS-3UTR GCA 90 bp GTGAGAGCAAAGGCTTTGCTCATCAGCCAGCCAGTCTTGTTACTATCTGGCTACAAACACTGTACCCAGTaGCCCAAGCCCAAAAAGCAG +
Preference number: 4 (lower is better)
Translates to: VRAKALLISQPVLLLSGYKHCTQ*PKPKKQ
Trigger: CTGCTTTTTGGGCTTGGGGCACTGGGTACAGTGTTT...GTAGCCAGATAGTAACAAGACTGGCTGGCTGATGAGCAAAGCCTTTGCTCTCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476258.5
CDS-3UTR CCA 90 bp AAACACTCATGCCATGGCCCACAGACCCAAGAGTCAAGGACAGAGAGAAACCTGCTAACCCGCCGGCATTaGCCGATTCAAATGAATTCT +
Preference number: 4 (lower is better)
Translates to: KHSCHGPQTQESRTERNLLTRRH*PIQMNS
Trigger: AGAATTCATTTGAATCGGCCAATGCCGGCGGGTTAG...CAGGTTTCTCTCTGTCCTTGACTCTTGGGTCTGTGGGCCATGGCATGAGTGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304834.11
ENST00000356033.8
CDS-3UTR CCA 90 bp CTACTACTAGAAAACACTCATGCCATGGCCCACAGACCCAAGAGTCAAGGACAGAAAACACTCATGCCATaGCCCACAGACCCAAGAGTC +
Preference number: 4 (lower is better)
Translates to: LLLENTHAMAHRPKSQGQKTLMP*PTDPRV
Trigger: GACTCTTGGGTCTGTGGGCCATGGCATGAGTGTTTT...CTGTCCTTGACTCTTGGGTCTGTGGGCCATGGCATGAGTGTTTTCTAGTAGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000470924.5
ENST00000476258.5
ENST00000482348.5
CDS-3UTR CCA 90 bp TCTACTACTAGAAAACACTCATGCCATGGCCCACAGACCCAAGAGTCAAGGACACTGAGCAAAGGCCACTaGCAAGTTAGGGCAACACCA +
Preference number: 4 (lower is better)
Translates to: STTRKHSCHGPQTQESRTLSKGH*QVRATP
Trigger: TGGTGTTGCCCTAACTTGCCAGTGGCCTTTGCTCAG...TGTCCTTGACTCTTGGGTCTGTGGGCCATGGCATGAGTGTTTTCTAGTAGTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
CDS-3UTR TCA 90 bp ACTACTAGAAAACACTCATGCCATGGCCCACAGACCCAAGAGTCAAGGACAGAGTATGGTCTGTCCAGTTaGGGCTTGGTAAACCCAAGT +
Preference number: 4 (lower is better)
Translates to: TTRKHSCHGPQTQESRTEYGLSS*GLVNPS
Trigger: ACTTGGGTTTACCAAGCCTCAACTGGACAGACCATA...CTCTGTCCTTGACTCTTGGGTCTGTGGGCCATGGCATGAGTGTTTTCTAGTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
CDS-3UTR TCA 90 bp GGCCCACAGACCCAAGAGTCAAGGACAGAGAGAAACCTGTTCTTCAAAAGAAAAGGCTCAATTGCTGAGTaGGGCGTGCTTTTTGTTCCC +
Preference number: 4 (lower is better)
Translates to: GPQTQESRTERNLFFKRKGSIAE*GVLFVP
Trigger: GGGAACAAAAAGCACGCCTCACTCAGCAATTGAGCC...TTTTCTTTTGAAGAACAGGTTTCTCTCTGTCCTTGACTCTTGGGTCTGTGGGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000482348.5
CDS-3UTR GCA 90 bp CAATCTACTACTAGAAAACACTCATGCCATGGCCCACAGACCCAAGAGTCAAGGGAAGTCTCCGGAGCTTaGTTCAGAGGAGTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: QSTTRKHSCHGPQTQESREVSGA*FRGVPS
Trigger: AGAAGGAACTCCTCTGAAGCAAGCTCCGGAGACTTC...CCTTGACTCTTGGGTCTGTGGGCCATGGCATGAGTGTTTTCTAGTAGTAGATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
CDS-3UTR GCA 90 bp GCCCACAGACCCAAGAGTCAAGGACAGAGAGAAACCTGTTCTTCAAAAGAAAAAGCCTGGCAGGAACGGTaGCTGTGGACTGTTTATGGT +
Preference number: 4 (lower is better)
Translates to: AHRPKSQGQRETCSSKEKAWQER*LWTVYG
Trigger: ACCATAAACAGTCCACAGGCACCGTTCCTGCCAGGC...TTTTTCTTTTGAAGAACAGGTTTCTCTCTGTCCTTGACTCTTGGGTCTGTGGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
CDS-3UTR CCA 90 bp GAGCAAAGGCTTTGCTCATCAGCCAGCCAGTCTTGTTACTATCTGGCTACTTTTTTCCTATTGGCTCTCTaGAGTGCCAAGCACCATGCG +
Preference number: 4 (lower is better)
Translates to: EQRLCSSASQSCYYLATFFLLAL*SAKHHA
Trigger: CGCATGGTGCTTGGCACTCCAGAGAGCCAATAGGAA...AAAAGTAGCCAGATAGTAACAAGACTGGCTGGCTGATGAGCAAAGCCTTTGCTC
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000304834.11
ENST00000356033.8
CDS-3UTR CCA 90 bp GAAAACACTCATGCCATGGCCCACAGACCCAAGAGTCAAGGACAGAGAGAAACCGAGACTTTCCTTTCATaGTCAAGCACCAGCATCATG +
Preference number: 4 (lower is better)
Translates to: ENTHAMAHRPKSQGQRETETFLS*SSTSIM
Trigger: CATGATGCTGGTGCTTGACCATGAAAGGAAAGTCTC...GGTTTCTCTCTGTCCTTGACTCTTGGGTCTGTGGGCCATGGCATGAGTGTTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
CDS-3UTR CCA 90 bp CCTCTGCGTGAGAGCAAAGGCTTTGCTCATCAGCCAGCCAGTCTTGTTACTATCTTAGCTGAGACAATGTaGACACCTTCCACAGAATCC +
Preference number: 4 (lower is better)
Translates to: PLRESKGFAHQPASLVTILAETM*TPSTES
Trigger: GGATTCTGTGGAAGGTGTCCACATTGTCTCAGCTAA...GATAGTAACAAGACTGGCTGGCTGATGAGCAAAGCCTTTGCTCTCACGCAGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476258.5
ENST00000482348.5
CDS-3UTR TCA 90 bp GAAAACACTCATGCCATGGCCCACAGACCCAAGAGTCAAGGACAGAGAGAAACCGTGTCCACATTTTCATaGATATCACCTTCTCCCTTC +
Preference number: 4 (lower is better)
Translates to: ENTHAMAHRPKSQGQRETVSTFS*ISPSPF
Trigger: GAAGGGAGAAGGTGATATTCATGAAAATGTGGACAC...GGTTTCTCTCTGTCCTTGACTCTTGGGTCTGTGGGCCATGGCATGAGTGTTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000409753.8
ENST00000470924.5
ENST00000476258.5
ENST00000482348.5
CDS-3UTR TCA 90 bp CACAGCATCAGGTTATTTAAAACAACACGCCTGTGGGACCCCGTTCCTGGAGGAGTGTCCACATTTTCATaGATATCACCTTCTCCCTTC +
Preference number: 4 (lower is better)
Translates to: HSIRLFKTTRLWDPVPGGVSTFS*ISPSPF
Trigger: GAAGGGAGAAGGTGATATTCATGAAAATGTGGACAC...TCCTCCAGGAACGGGGTCCCACAGGCGTGTTGTTTTAAATAACCTGATGCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000304834.11
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
CDS-3UTR TCA 90 bp CTTTTAGTTCCAGGCAGTTTCATTGTACATCCAAGCCTTCCTCTGCGTGAGAGCTATGGTCTGTCCAGTTaGGGCTTGGTAAACCCAAGT +
Preference number: 4 (lower is better)
Translates to: LLVPGSFIVHPSLPLRESYGLSS*GLVNPS
Trigger: ACTTGGGTTTACCAAGCCTCAACTGGACAGACCATA...GCTCTCACGCAGAGGAAGGCTTGGATGTACAATGAAACTGCCTGGAACTAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
CDS-3UTR GCA 90 bp GGCCCACAGACCCAAGAGTCAAGGACAGAGAGAAACCTGTTCTTCAAAAGAAAAGAAGTCTCCGGAGCTTaGTTCAGAGGAGTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: GPQTQESRTERNLFFKRKEVSGA*FRGVPS
Trigger: AGAAGGAACTCCTCTGAAGCAAGCTCCGGAGACTTC...TTTTCTTTTGAAGAACAGGTTTCTCTCTGTCCTTGACTCTTGGGTCTGTGGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000470924.5
ENST00000476258.5
ENST00000482348.5
CDS-3UTR GCA 90 bp CAATCTACTACTAGAAAACACTCATGCCATGGCCCACAGACCCAAGAGTCAAGGAAAAGGCAGTTTCTTTaGTTTGCAGGCGGCAAGGCA +
Preference number: 4 (lower is better)
Translates to: QSTTRKHSCHGPQTQESRKRQFL*FAGGKA
Trigger: TGCCTTGCCGCCTGCAAAGCAAAGAAACTGCCTTTT...CCTTGACTCTTGGGTCTGTGGGCCATGGCATGAGTGTTTTCTAGTAGTAGATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
CDS-3UTR GCA 90 bp TCTACTACTAGAAAACACTCATGCCATGGCCCACAGACCCAAGAGTCAAGGACAAAAAGGCAGTTTCTTTaGTTTGCAGGCGGCAAGGCA +
Preference number: 4 (lower is better)
Translates to: STTRKHSCHGPQTQESRTKRQFL*FAGGKA
Trigger: TGCCTTGCCGCCTGCAAAGCAAAGAAACTGCCTTTT...TGTCCTTGACTCTTGGGTCTGTGGGCCATGGCATGAGTGTTTTCTAGTAGTAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
CDS-3UTR GCA 90 bp TGCCATGGCCCACAGACCCAAGAGTCAAGGACAGAGAGAAACCTGTTCTTCAAATGTGATTGCCTCCCTTaGTTCACTGCTTTTAGTTCC +
Preference number: 4 (lower is better)
Translates to: CHGPQTQESRTERNLFFKCDCLP*FTAFSS
Trigger: GGAACTAAAAGCAGTGAAGCAAGGGAGGCAATCACA...TTTGAAGAACAGGTTTCTCTCTGTCCTTGACTCTTGGGTCTGTGGGCCATGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
CDS-3UTR GCA 90 bp CATGCACACAGCATCAGGTTATTTAAAACAACACGCCTGTGGGACCCCGTTCCTTTGCTGAGTGAGGCGTaGTTTTTGTTCCCAAGTTCT +
Preference number: 4 (lower is better)
Translates to: HAHSIRLFKTTRLWDPVPLLSEA*FLFPSS
Trigger: AGAACTTGGGAACAAAAAGCACGCCTCACTCAGCAA...AGGAACGGGGTCCCACAGGCGTGTTGTTTTAAATAACCTGATGCTGTGTGCATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000482348.5
CDS-3UTR CCA 90 bp GCCATGGCCCACAGACCCAAGAGTCAAGGACAGAGAGAAACCTGTTCTTCAAAATTCTTTCATTCCTATTaGCTCTCTGGAGTGCCAAGC +
Preference number: 4 (lower is better)
Translates to: AMAHRPKSQGQRETCSSKFFHSY*LSGVPS
Trigger: GCTTGGCACTCCAGAGAGCCAATAGGAATGAAAGAA...TTTTGAAGAACAGGTTTCTCTCTGTCCTTGACTCTTGGGTCTGTGGGCCATGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304834.11
ENST00000356033.8
CDS-3UTR CCA 90 bp TCAGATCTAAGAAGTCTCCGGAGCTTGCTTCAGAGGAGTTCCTTCTCTGCAGTCGAGACTTTCCTTTCATaGTCAAGCACCAGCATCATG +
Preference number: 4 (lower is better)
Translates to: SDLRSLRSLLQRSSFSAVETFLS*SSTSIM
Trigger: CATGATGCTGGTGCTTGACCATGAAAGGAAAGTCTC...GACTGCAGAGAAGGAACTCCTCTGAAGCAAGCTCCGGAGACTTCTTAGATCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304834.11
CDS-3UTR CCA 90 bp GCCATGGCCCACAGACCCAAGAGTCAAGGACAGAGAGAAACCTGTTCTTCAAAAGAGACTTTCCTTTCATaGTCAAGCACCAGCATCATG +
Preference number: 4 (lower is better)
Translates to: AMAHRPKSQGQRETCSSKETFLS*SSTSIM
Trigger: CATGATGCTGGTGCTTGACCATGAAAGGAAAGTCTC...TTTTGAAGAACAGGTTTCTCTCTGTCCTTGACTCTTGGGTCTGTGGGCCATGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
CDS-3UTR CCA 90 bp TCCAATCTACTACTAGAAAACACTCATGCCATGGCCCACAGACCCAAGAGTCAACTTAGCCCCACAAAATaGCTCCCTTTGTGCCACTTG +
Preference number: 4 (lower is better)
Translates to: SNLLLENTHAMAHRPKSQLSPTK*LPLCHL
Trigger: CAAGTGGCACAAAGGGAGCCATTTTGTGGGGCTAAG...TTGACTCTTGGGTCTGTGGGCCATGGCATGAGTGTTTTCTAGTAGTAGATTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000482348.5
CDS-3UTR TCA 90 bp GAGCAAAGGCTTTGCTCATCAGCCAGCCAGTCTTGTTACTATCTGGCTACTTTTTATGGTCTGTCCAGTTaGGGCTTGGTAAACCCAAGT +
Preference number: 4 (lower is better)
Translates to: EQRLCSSASQSCYYLATFYGLSS*GLVNPS
Trigger: ACTTGGGTTTACCAAGCCTCAACTGGACAGACCATA...AAAAGTAGCCAGATAGTAACAAGACTGGCTGGCTGATGAGCAAAGCCTTTGCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
CDS-3UTR CCA 90 bp GAGCAAAGGCTTTGCTCATCAGCCAGCCAGTCTTGTTACTATCTGGCTACTTTTCTAACCCGCCGGCATTaGCCGATTCAAATGAATTCT +
Preference number: 4 (lower is better)
Translates to: EQRLCSSASQSCYYLATFLTRRH*PIQMNS
Trigger: AGAATTCATTTGAATCGGCCAATGCCGGCGGGTTAG...AAAAGTAGCCAGATAGTAACAAGACTGGCTGGCTGATGAGCAAAGCCTTTGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304834.11
ENST00000356033.8
CDS-3UTR CCA 90 bp GCCCACAGACCCAAGAGTCAAGGACAGAGAGAAACCTGTTCTTCAAAAGAAAAAAAAACACTCATGCCATaGCCCACAGACCCAAGAGTC +
Preference number: 4 (lower is better)
Translates to: AHRPKSQGQRETCSSKEKKTLMP*PTDPRV
Trigger: GACTCTTGGGTCTGTGGGCCATGGCATGAGTGTTTT...TTTTTCTTTTGAAGAACAGGTTTCTCTCTGTCCTTGACTCTTGGGTCTGTGGGC
47% GC, longest homopolymer 9 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000470924.5
ENST00000476258.5
ENST00000482348.5
CDS-3UTR CCA 90 bp CATCATGCACACAGCATCAGGTTATTTAAAACAACACGCCTGTGGGACCCCGTTTTAGCTGAGACAATGTaGACACCTTCCACAGAATCC +
Preference number: 4 (lower is better)
Translates to: HHAHSIRLFKTTRLWDPVLAETM*TPSTES
Trigger: GGATTCTGTGGAAGGTGTCCACATTGTCTCAGCTAA...AACGGGGTCCCACAGGCGTGTTGTTTTAAATAACCTGATGCTGTGTGCATGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000476258.5
ENST00000482348.5
CDS-3UTR TCA 90 bp AGAAAACACTCATGCCATGGCCCACAGACCCAAGAGTCAAGGACAGAGAGAAACTGGATATTGTTTACTTaGAGCAACAGTCCAGGATTG +
Preference number: 4 (lower is better)
Translates to: RKHSCHGPQTQESRTERNWILFT*SNSPGL
Trigger: CAATCCTGGACTGTTGCTTCAAGTAAACAATATCCA...GTTTCTCTCTGTCCTTGACTCTTGGGTCTGTGGGCCATGGCATGAGTGTTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409753.8
ENST00000476258.5
CDS-3UTR GCA 90 bp GCCCACAGACCCAAGAGTCAAGGACAGAGAGAAACCTGTTCTTCAAAAGAAAAAACTAGAAAACACTCATaGCATGGCCCACAGACCCAA +
Preference number: 4 (lower is better)
Translates to: AHRPKSQGQRETCSSKEKTRKHS*HGPQTQ
Trigger: TTGGGTCTGTGGGCCATGGCATGAGTGTTTTCTAGT...TTTTTCTTTTGAAGAACAGGTTTCTCTCTGTCCTTGACTCTTGGGTCTGTGGGC
46% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000470924.5
ENST00000476258.5
ENST00000482348.5
CDS-3UTR GCA 90 bp TGCTTCACTGCTTTTAGTTCCAGGCAGTTTCATTGTACATCCAAGCCTTCCTCTTGTGATTGCCTCCCTTaGTTCACTGCTTTTAGTTCC +
Preference number: 4 (lower is better)
Translates to: CFTAFSSRQFHCTSKPSSCDCLP*FTAFSS
Trigger: GGAACTAAAAGCAGTGAAGCAAGGGAGGCAATCACA...AGAGGAAGGCTTGGATGTACAATGAAACTGCCTGGAACTAAAAGCAGTGAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
CDS GCA 90 bp CCCGAGGGGCGCTGGGAAACTCCACACCCAACAGCCGACCACCGCTaGAGGAGCCGCCGCTGCCGCCTGTCCGGCCGATCGACGCCTTTA +
Preference number: 5 (lower is better)
Translates to: PEGRWETPHPTADHR*RSRRCRLSGRSTPL
Trigger: TAAAGGCGTCGATCGGCCGGACAGGCGGCAGCGGCGGCTCCTGCAGCGGTGGTCGGCTGTTGGGTGTGGAGTTTCCCAGCGCCCCTCGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304834.11
ENST00000356033.8
CDS CCA 90 bp CTGGCGCCGGAGCAGAACGCTCAAAGGGTCGGACCCGAGGGGCGCTaGGAAACTCCACACCCAACAGCCGACCACCGCTGCAGGAGCCGC +
Preference number: 5 (lower is better)
Translates to: LAPEQNAQRVGPEGR*ETPHPTADHRCRSR
Trigger: GCGGCTCCTGCAGCGGTGGTCGGCTGTTGGGTGTGGAGTTTCCCAGCGCCCCTCGGGTCCGACCCTTTGAGCGTTCTGCTCCGGCGCCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000465454.1
ENST00000581874.1
CDS GCA 90 bp AGGAGCCCGCCGGACCTGATCGATCCGGTCTCCGGATCCAATGGCTaGGCGCGAGAGCGAGACCAACCGCATGCCACGGGGGAGAGACAG +
Preference number: 5 (lower is better)
Translates to: RSPPDLIDPVSGSNG*ARERDQPHATGERQ
Trigger: CTGTCTCTCCCCCGTGGCATGCGGTTGGTCTCGCTCTCGCGCGCAGCCATTGGATCCGGAGACCGGATCGATCAGGTCCGGCGGGCTCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476258.5
CDS CCA 90 bp GGTAAGGAGCCCGCCGGACCTGATCGATCCGGTCTCCGGATCCAATaGCTGCGCGCGAGAGCGAGACCAACCGCATGCCACGGGGGAGAG +
Preference number: 5 (lower is better)
Translates to: GKEPAGPDRSGLRIQ*LRARARPTACHGGE
Trigger: CTCTCCCCCGTGGCATGCGGTTGGTCTCGCTCTCGCGCGCAGCCATTGGATCCGGAGACCGGATCGATCAGGTCCGGCGGGCTCCTTACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476258.5
CDS GCA 90 bp GGTCTCCGGATCCAATGGCTGCGCGCGAGAGCGAGACCAACCGCATaGCACGGGGGAGAGACAGGAGCGCGTGGCCCATCAATGGGACAA +
Preference number: 5 (lower is better)
Translates to: GLRIQWLRARARPTA*HGGETGARGPSMGQ
Trigger: TTGTCCCATTGATGGGCCACGCGCTCCTGTCTCTCCCCCGTGGCATGCGGTTGGTCTCGCTCTCGCGCGCAGCCATTGGATCCGGAGACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476258.5
CDS CCA 90 bp CCGCTCGACCACACATGCACCTGTCAGGTAGGTCCGAATAAGGAGTaGGGGCACGGCGAGGGTAAGGAGCCCGCCGGACCTGATCGATCC +
Preference number: 5 (lower is better)
Translates to: PLDHTCTCQVGPNKE*GHGEGKEPAGPDRS
Trigger: GGATCGATCAGGTCCGGCGGGCTCCTTACCCTCGCCGTGCCCCCACTCCTTATTCGGACCTACCTGACAGGTGCATGTGTGGTCGAGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476258.5
CDS CCA 90 bp GAGAGCGAGACCAACCGCATGCCACGGGGGAGAGACAGGAGCGCGTaGCCCATCAATGGGACAATAGGACCTGACCATGCATGGGGCCCT +
Preference number: 5 (lower is better)
Translates to: ESETNRMPRGRDRSA*PINGTIGPDHAWGP
Trigger: AGGGCCCCATGCATGGTCAGGTCCTATTGTCCCATTGATGGGCCACGCGCTCCTGTCTCTCCCCCGTGGCATGCGGTTGGTCTCGCTCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476258.5
CDS-3UTR CAA 90 bp GCCTGTGGGACCCCGTTCCTGGAGGAAGACCCGCTTCAGTGTGATTGCCTCCCTCTGCCACCACTAGACTaGGCACCTGCTGACTTGGCC +
Preference number: 5 (lower is better)
Translates to: ACGTPFLEEDPLQCDCLPLPPLD*APADLA
Trigger: GGCCAAGTCAGCAGGTGCCAAGTCTAGTGGTGGCAG...AGGGAGGCAATCACACTGAAGCGGGTCTTCCTCCAGGAACGGGGTCCCACAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
CDS-3UTR CAA 90 bp GGACCCCGTTCCTGGAGGAAGACCCGCTTCAGTGTGATTGCCTCCCTTGCTTCACTGCCACCACTAGACTaGGCACCTGCTGACTTGGCC +
Preference number: 5 (lower is better)
Translates to: GPRSWRKTRFSVIASLASLPPLD*APADLA
Trigger: GGCCAAGTCAGCAGGTGCCAAGTCTAGTGGTGGCAG...TGAAGCAAGGGAGGCAATCACACTGAAGCGGGTCTTCCTCCAGGAACGGGGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
CDS-3UTR CAA 90 bp ACGCCTGTGGGACCCCGTTCCTGGAGGAAGACCCGCTTCAGTGTGATTGCCTCCACAAAATGGCTCCCTTaGTGCCACTTGGCCAGGACC +
Preference number: 5 (lower is better)
Translates to: TPVGPRSWRKTRFSVIASTKWLP*CHLART
Trigger: GGTCCTGGCCAAGTGGCACAAAGGGAGCCATTTTGT...GGAGGCAATCACACTGAAGCGGGTCTTCCTCCAGGAACGGGGTCCCACAGGCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482348.5
CDS-3UTR CAA 90 bp ACCCCGTTCCTGGAGGAAGACCCGCTTCAGTGTGATTGCCTCCCTTGCTTCACTCTGCCACCACTAGACTaGGCACCTGCTGACTTGGCC +
Preference number: 5 (lower is better)
Translates to: TPFLEEDPLQCDCLPCFTLPPLD*APADLA
Trigger: GGCCAAGTCAGCAGGTGCCAAGTCTAGTGGTGGCAG...AGTGAAGCAAGGGAGGCAATCACACTGAAGCGGGTCTTCCTCCAGGAACGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
CDS-3UTR CAA 90 bp GTGGGACCCCGTTCCTGGAGGAAGACCCGCTTCAGTGTGATTGCCTCCCTTGCTGCGCAGGCCTCTTCATaGTTCACATGTCACAGGAGG +
Preference number: 5 (lower is better)
Translates to: VGPRSWRKTRFSVIASLAAQASS*FTCHRR
Trigger: CCTCCTGTGACATGTGAACAATGAAGAGGCCTGCGC...AGCAAGGGAGGCAATCACACTGAAGCGGGTCTTCCTCCAGGAACGGGGTCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
CDS-3UTR CAA 90 bp GCTTTGCAGGCGGCAAGGCAGGAGGCGCAGGCCTCTTCATTGTTCACATGTCACGGCAGTTTCTTTGCTTaGCAGGCGGCAAGGCAGGAG +
Preference number: 5 (lower is better)
Translates to: ALQAARQEAQASSLFTCHGSFFA*QAARQE
Trigger: CTCCTGCCTTGCCGCCTGCAAAGCAAAGAAACTGCC...GTGACATGTGAACAATGAAGAGGCCTGCGCCTCCTGCCTTGCCGCCTGCAAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
CDS-3UTR CAA 90 bp GGCCTCTTCATTGTTCACATGTCACAGGAGGAGGCTCTGAGCAAAGGCCACTGGCTGCCACCACTAGACTaGGCACCTGCTGACTTGGCC +
Preference number: 5 (lower is better)
Translates to: GLFIVHMSQEEALSKGHWLPPLD*APADLA
Trigger: GGCCAAGTCAGCAGGTGCCAAGTCTAGTGGTGGCAG...CCAGTGGCCTTTGCTCAGAGCCTCCTCCTGTGACATGTGAACAATGAAGAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
CDS-3UTR CAA 90 bp GGCGGCAAGGCAGGAGGCGCAGGCCTCTTCATTGTTCACATGTCACAGGAGGAGAGAAGTCTCCGGAGCTaGCTTCAGAGGAGTTCCTTC +
Preference number: 5 (lower is better)
Translates to: GGKAGGAGLFIVHMSQEERSLRS*LQRSSF
Trigger: GAAGGAACTCCTCTGAAGCAAGCTCCGGAGACTTCT...CTCCTCCTGTGACATGTGAACAATGAAGAGGCCTGCGCCTCCTGCCTTGCCGCC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
CDS-3UTR CAA 90 bp CAACACGCCTGTGGGACCCCGTTCCTGGAGGAAGACCCGCTTCAGTGTGATTGCAGAAGTCTCCGGAGCTaGCTTCAGAGGAGTTCCTTC +
Preference number: 5 (lower is better)
Translates to: QHACGTPFLEEDPLQCDCRSLRS*LQRSSF
Trigger: GAAGGAACTCCTCTGAAGCAAGCTCCGGAGACTTCT...GCAATCACACTGAAGCGGGTCTTCCTCCAGGAACGGGGTCCCACAGGCGTGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
CDS-3UTR CAA 90 bp TGTGGGACCCCGTTCCTGGAGGAAGACCCGCTTCAGTGTGATTGCCTCCCTTGCCCTCCTAAGGCTCAATaGCTGAGTGAGGCGTGCTTT +
Preference number: 5 (lower is better)
Translates to: CGTPFLEEDPLQCDCLPCPPKAQ*LSEACF
Trigger: AAAGCACGCCTCACTCAGCAATTGAGCCTTAGGAGG...GCAAGGGAGGCAATCACACTGAAGCGGGTCTTCCTCCAGGAACGGGGTCCCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482348.5
CDS-3UTR CAA 90 bp GGCAAGGCAGGAGGCGCAGGCCTCTTCATTGTTCACATGTCACAGGAGGAGGCTAGAAGTCTCCGGAGCTaGCTTCAGAGGAGTTCCTTC +
Preference number: 5 (lower is better)
Translates to: GKAGGAGLFIVHMSQEEARSLRS*LQRSSF
Trigger: GAAGGAACTCCTCTGAAGCAAGCTCCGGAGACTTCT...AGCCTCCTCCTGTGACATGTGAACAATGAAGAGGCCTGCGCCTCCTGCCTTGCC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
CDS-3UTR CAA 90 bp ACGCCTGTGGGACCCCGTTCCTGGAGGAAGACCCGCTTCAGTGTGATTGCCTCCTTCCAGGCAGTTTCATaGTACATCCAAGCCTTCCTC +
Preference number: 5 (lower is better)
Translates to: TPVGPRSWRKTRFSVIASFQAVS*YIQAFL
Trigger: GAGGAAGGCTTGGATGTACAATGAAACTGCCTGGAA...GGAGGCAATCACACTGAAGCGGGTCTTCCTCCAGGAACGGGGTCCCACAGGCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
CDS-3UTR CAA 90 bp CAACACGCCTGTGGGACCCCGTTCCTGGAGGAAGACCCGCTTCAGTGTGATTGCGAAGGGGTCTTTCCTTaGTTAGGAAGGGGAGACACT +
Preference number: 5 (lower is better)
Translates to: QHACGTPFLEEDPLQCDCEGVFP*LGRGDT
Trigger: AGTGTCTCCCCTTCCTAACAAAGGAAAGACCCCTTC...GCAATCACACTGAAGCGGGTCTTCCTCCAGGAACGGGGTCCCACAGGCGTGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000476258.5
CDS-3UTR CAA 90 bp CTTTTAGTTCCAGGCAGTTTCATTGTACATCCAAGCCTTCCTCTGCGTGAGAGCGAAAACCCACTCGGGTaGGCTCGTTCCCCGCGCCCG +
Preference number: 5 (lower is better)
Translates to: LLVPGSFIVHPSLPLRESENPLG*ARSPRP
Trigger: CGGGCGCGGGGAACGAGCCAACCCGAGTGGGTTTTC...GCTCTCACGCAGAGGAAGGCTTGGATGTACAATGAAACTGCCTGGAACTAAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000476258.5
CDS GCA 90 bp TTGAACTCGGGAGGTGGAGGTTGTGGTGTGCCAAGATGGCACCACTaGACTCTGTACTCCAGCCTGCTGACTTGGCCCAAGAAGCTTGAT +
Preference number: 5 (lower is better)
Translates to: LNSGGGGCGVPRWHH*TLYSSLLTWPKKLD
Trigger: ATCAAGCTTCTTGGGCCAAGTCAGCAGGCTGGAGTACAGAGTGCAGTGGTGCCATCTTGGCACACCACAACCTCCACCTCCCGAGTTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465454.1
CDS CCA 90 bp AAGAATCACTTGAACTCGGGAGGTGGAGGTTGTGGTGTGCCAAGATaGCACCACTGCACTCTGTACTCCAGCCTGCTGACTTGGCCCAAG +
Preference number: 5 (lower is better)
Translates to: KNHLNSGGGGCGVPR*HHCTLYSSLLTWPK
Trigger: CTTGGGCCAAGTCAGCAGGCTGGAGTACAGAGTGCAGTGGTGCCATCTTGGCACACCACAACCTCCACCTCCCGAGTTCAAGTGATTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465454.1
CDS-3UTR CAA 90 bp CAAGGCAGGAGGCGCAGGCCTCTTCATTGTTCACATGTCACAGGAGGAGGCTCTCCTAACCCGCCGGCATaGGCCGATTCAAATGAATTC +
Preference number: 5 (lower is better)
Translates to: QGRRRRPLHCSHVTGGGSPNPPA*ADSNEF
Trigger: GAATTCATTTGAATCGGCCAATGCCGGCGGGTTAGG...AGAGCCTCCTCCTGTGACATGTGAACAATGAAGAGGCCTGCGCCTCCTGCCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304834.11
ENST00000356033.8
CDS-3UTR CAA 90 bp GTTAGGGCAACACCAAGAAGGCTCTGCGGAGAGACTCCCTGTGGGTTGGGGCCTTTATGGTCTGTCCAGTaGAGGCTTGGTAAACCCAAG +
Preference number: 5 (lower is better)
Translates to: VRATPRRLCGETPCGLGPLWSVQ*RLGKPK
Trigger: CTTGGGTTTACCAAGCCTCAACTGGACAGACCATAA...AGGCCCCAACCCACAGGGAGTCTCTCCGCAGAGCCTTCTTGGTGTTGCCCTAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
CDS-3UTR CAA 90 bp AAAATAAAAGGCAGTTTCTTTGCTTTGCAGGCGGCAAGGCAGGAGGCGCAGGCCGGCAGTTTCTTTGCTTaGCAGGCGGCAAGGCAGGAG +
Preference number: 5 (lower is better)
Translates to: KIKGSFFALQAARQEAQAGSFFA*QAARQE
Trigger: CTCCTGCCTTGCCGCCTGCAAAGCAAAGAAACTGCC...GGCCTGCGCCTCCTGCCTTGCCGCCTGCAAAGCAAAGAAACTGCCTTTTATTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
CDS-3UTR CAA 90 bp GCCTGTGGGACCCCGTTCCTGGAGGAAGACCCGCTTCAGTGTGATTGCCTCCCTATCAGCCAGCCAGTCTaGTTACTATCTGGCTACTTT +
Preference number: 5 (lower is better)
Translates to: ACGTPFLEEDPLQCDCLPISQPV*LLSGYF
Trigger: AAAGTAGCCAGATAGTAACAAGACTGGCTGGCTGAT...AGGGAGGCAATCACACTGAAGCGGGTCTTCCTCCAGGAACGGGGTCCCACAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
CDS-3UTR CAA 90 bp GTACATCCAAGCCTTCCTCTGCGTGAGAGCAAAGGCTTTGCTCATCAGCCAGCCGTGAGAGCAAAGGCTTaGCTCATCAGCCAGCCAGTC +
Preference number: 5 (lower is better)
Translates to: VHPSLPLRESKGFAHQPAVRAKA*LISQPV
Trigger: GACTGGCTGGCTGATGAGCAAAGCCTTTGCTCTCAC...GGCTGGCTGATGAGCAAAGCCTTTGCTCTCACGCAGAGGAAGGCTTGGATGTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
CDS-3UTR CAA 90 bp GCAGGCGGCAAGGCAGGAGGCGCAGGCCTCTTCATTGTTCACATGTCACAGGAGATTCTTTCATTCCTATaGGCTCTCTGGAGTGCCAAG +
Preference number: 5 (lower is better)
Translates to: AGGKAGGAGLFIVHMSQEILSFL*ALWSAK
Trigger: CTTGGCACTCCAGAGAGCCAATAGGAATGAAAGAAT...CTCCTGTGACATGTGAACAATGAAGAGGCCTGCGCCTCCTGCCTTGCCGCCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304834.11
ENST00000356033.8
CDS-3UTR CAA 90 bp AGAAAACACTCATGCCATGGCCCACAGACCCAAGAGTCAAGGACAGAGAGAAACCTGCCACCACTAGACTaGGCACCTGCTGACTTGGCC +
Preference number: 5 (lower is better)
Translates to: RKHSCHGPQTQESRTERNLPPLD*APADLA
Trigger: GGCCAAGTCAGCAGGTGCCAAGTCTAGTGGTGGCAG...GTTTCTCTCTGTCCTTGACTCTTGGGTCTGTGGGCCATGGCATGAGTGTTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000470924.5
ENST00000476258.5
ENST00000482348.5
CDS-3UTR CAA 90 bp GTGAGAGCAAAGGCTTTGCTCATCAGCCAGCCAGTCTTGTTACTATCTGGCTACCTGCCACCACTAGACTaGGCACCTGCTGACTTGGCC +
Preference number: 5 (lower is better)
Translates to: VRAKALLISQPVLLLSGYLPPLD*APADLA
Trigger: GGCCAAGTCAGCAGGTGCCAAGTCTAGTGGTGGCAG...GTAGCCAGATAGTAACAAGACTGGCTGGCTGATGAGCAAAGCCTTTGCTCTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
CDS-3UTR CAA 90 bp ATCAGGTTATTTAAAACAACACGCCTGTGGGACCCCGTTCCTGGAGGAAGACCCGGCAGTTTCTTTGCTTaGCAGGCGGCAAGGCAGGAG +
Preference number: 5 (lower is better)
Translates to: IRLFKTTRLWDPVPGGRPGSFFA*QAARQE
Trigger: CTCCTGCCTTGCCGCCTGCAAAGCAAAGAAACTGCC...GGGTCTTCCTCCAGGAACGGGGTCCCACAGGCGTGTTGTTTTAAATAACCTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
CDS-3UTR CAA 90 bp CTCTGCGTGAGAGCAAAGGCTTTGCTCATCAGCCAGCCAGTCTTGTTACTATCTTTGGGGTCGACTCCCTaGAAGGTGGTGGTTGTGGTC +
Preference number: 5 (lower is better)
Translates to: LCVRAKALLISQPVLLLSLGSTP*KVVVVV
Trigger: GACCACAACCACCACCTTCAAGGGAGTCGACCCCAA...AGATAGTAACAAGACTGGCTGGCTGATGAGCAAAGCCTTTGCTCTCACGCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
CDS-3UTR CAA 90 bp ACTACTAGAAAACACTCATGCCATGGCCCACAGACCCAAGAGTCAAGGACAGAGGGCAGTTTCTTTGCTTaGCAGGCGGCAAGGCAGGAG +
Preference number: 5 (lower is better)
Translates to: TTRKHSCHGPQTQESRTEGSFFA*QAARQE
Trigger: CTCCTGCCTTGCCGCCTGCAAAGCAAAGAAACTGCC...CTCTGTCCTTGACTCTTGGGTCTGTGGGCCATGGCATGAGTGTTTTCTAGTAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
CDS-3UTR CAA 90 bp GGACCCCGTTCCTGGAGGAAGACCCGCTTCAGTGTGATTGCCTCCCTTGCTTCAATCAGCCAGCCAGTCTaGTTACTATCTGGCTACTTT +
Preference number: 5 (lower is better)
Translates to: GPRSWRKTRFSVIASLASISQPV*LLSGYF
Trigger: AAAGTAGCCAGATAGTAACAAGACTGGCTGGCTGAT...TGAAGCAAGGGAGGCAATCACACTGAAGCGGGTCTTCCTCCAGGAACGGGGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
CDS-3UTR CAA 90 bp GGCAAGTTAGGGCAACACCAAGAAGGCTCTGCGGAGAGACTCCCTGTGGGTTGGATCAGCCAGCCAGTCTaGTTACTATCTGGCTACTTT +
Preference number: 5 (lower is better)
Translates to: GKLGQHQEGSAERLPVGWISQPV*LLSGYF
Trigger: AAAGTAGCCAGATAGTAACAAGACTGGCTGGCTGAT...CCAACCCACAGGGAGTCTCTCCGCAGAGCCTTCTTGGTGTTGCCCTAACTTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
CDS-3UTR CAA 90 bp ATCAGGTTATTTAAAACAACACGCCTGTGGGACCCCGTTCCTGGAGGAAGACCCGTGAGAGCAAAGGCTTaGCTCATCAGCCAGCCAGTC +
Preference number: 5 (lower is better)
Translates to: IRLFKTTRLWDPVPGGRPVRAKA*LISQPV
Trigger: GACTGGCTGGCTGATGAGCAAAGCCTTTGCTCTCAC...GGGTCTTCCTCCAGGAACGGGGTCCCACAGGCGTGTTGTTTTAAATAACCTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
CDS-3UTR CAA 90 bp CCTCTGCGTGAGAGCAAAGGCTTTGCTCATCAGCCAGCCAGTCTTGTTACTATCGTGAGAGCAAAGGCTTaGCTCATCAGCCAGCCAGTC +
Preference number: 5 (lower is better)
Translates to: PLRESKGFAHQPASLVTIVRAKA*LISQPV
Trigger: GACTGGCTGGCTGATGAGCAAAGCCTTTGCTCTCAC...GATAGTAACAAGACTGGCTGGCTGATGAGCAAAGCCTTTGCTCTCACGCAGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
CDS-3UTR CAA 90 bp ACCCCGTTCCTGGAGGAAGACCCGCTTCAGTGTGATTGCCTCCCTTGCTTCACTTTCCAGGCAGTTTCATaGTACATCCAAGCCTTCCTC +
Preference number: 5 (lower is better)
Translates to: TPFLEEDPLQCDCLPCFTFQAVS*YIQAFL
Trigger: GAGGAAGGCTTGGATGTACAATGAAACTGCCTGGAA...AGTGAAGCAAGGGAGGCAATCACACTGAAGCGGGTCTTCCTCCAGGAACGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
CDS-3UTR CAA 90 bp ACCCCGTTCCTGGAGGAAGACCCGCTTCAGTGTGATTGCCTCCCTTGCTTCACTAGCTTCTTCCAAGCCTaGAAGAGGATCCCAGACATA +
Preference number: 5 (lower is better)
Translates to: TPFLEEDPLQCDCLPCFTSFFQA*KRIPDI
Trigger: TATGTCTGGGATCCTCTTCAAGGCTTGGAAGAAGCT...AGTGAAGCAAGGGAGGCAATCACACTGAAGCGGGTCTTCCTCCAGGAACGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482348.5
CDS-3UTR CAA 90 bp AAAGGCCACTGGCAAGTTAGGGCAACACCAAGAAGGCTCTGCGGAGAGACTCCCAGTGAGGCGTGCTTTTaGTTCCCAAGTTCTCTAACC +
Preference number: 5 (lower is better)
Translates to: KGHWQVRATPRRLCGETPSEACF*FPSSLT
Trigger: GGTTAGAGAACTTGGGAACAAAAAGCACGCCTCACT...GGGAGTCTCTCCGCAGAGCCTTCTTGGTGTTGCCCTAACTTGCCAGTGGCCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482348.5
CDS-3UTR CAA 90 bp ACTCATGCCATGGCCCACAGACCCAAGAGTCAAGGACAGAGAGAAACCTGTTCTAGAAGTCTCCGGAGCTaGCTTCAGAGGAGTTCCTTC +
Preference number: 5 (lower is better)
Translates to: THAMAHRPKSQGQRETCSRSLRS*LQRSSF
Trigger: GAAGGAACTCCTCTGAAGCAAGCTCCGGAGACTTCT...AGAACAGGTTTCTCTCTGTCCTTGACTCTTGGGTCTGTGGGCCATGGCATGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000470924.5
ENST00000476258.5
ENST00000482348.5
CDS-3UTR CAA 90 bp GAAAACACTCATGCCATGGCCCACAGACCCAAGAGTCAAGGACAGAGAGAAACCAGAAGTCTCCGGAGCTaGCTTCAGAGGAGTTCCTTC +
Preference number: 5 (lower is better)
Translates to: ENTHAMAHRPKSQGQRETRSLRS*LQRSSF
Trigger: GAAGGAACTCCTCTGAAGCAAGCTCCGGAGACTTCT...GGTTTCTCTCTGTCCTTGACTCTTGGGTCTGTGGGCCATGGCATGAGTGTTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000470924.5
ENST00000476258.5
ENST00000482348.5
CDS-3UTR CAA 90 bp AATAAAAGGCAGTTTCTTTGCTTTGCAGGCGGCAAGGCAGGAGGCGCAGGCCTCTTATGGTCTGTCCAGTaGAGGCTTGGTAAACCCAAG +
Preference number: 5 (lower is better)
Translates to: NKRQFLCFAGGKAGGAGLLWSVQ*RLGKPK
Trigger: CTTGGGTTTACCAAGCCTCAACTGGACAGACCATAA...GAGGCCTGCGCCTCCTGCCTTGCCGCCTGCAAAGCAAAGAAACTGCCTTTTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
CDS-3UTR CAA 90 bp GTACATCCAAGCCTTCCTCTGCGTGAGAGCAAAGGCTTTGCTCATCAGCCAGCCTTATGGTCTGTCCAGTaGAGGCTTGGTAAACCCAAG +
Preference number: 5 (lower is better)
Translates to: VHPSLPLRESKGFAHQPALWSVQ*RLGKPK
Trigger: CTTGGGTTTACCAAGCCTCAACTGGACAGACCATAA...GGCTGGCTGATGAGCAAAGCCTTTGCTCTCACGCAGAGGAAGGCTTGGATGTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
CDS-3UTR CAA 90 bp TGCCATGGCCCACAGACCCAAGAGTCAAGGACAGAGAGAAACCTGTTCTTCAAAGCGCAGGCCTCTTCATaGTTCACATGTCACAGGAGG +
Preference number: 5 (lower is better)
Translates to: CHGPQTQESRTERNLFFKAQASS*FTCHRR
Trigger: CCTCCTGTGACATGTGAACAATGAAGAGGCCTGCGC...TTTGAAGAACAGGTTTCTCTCTGTCCTTGACTCTTGGGTCTGTGGGCCATGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
CDS-3UTR CAA 90 bp AGCTTTCCCTCCAATCTACTACTAGAAAACACTCATGCCATGGCCCACAGACCCGCGCAGGCCTCTTCATaGTTCACATGTCACAGGAGG +
Preference number: 5 (lower is better)
Translates to: SFPSNLLLENTHAMAHRPAQASS*FTCHRR
Trigger: CCTCCTGTGACATGTGAACAATGAAGAGGCCTGCGC...GGGTCTGTGGGCCATGGCATGAGTGTTTTCTAGTAGTAGATTGGAGGGAAAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
CDS-3UTR CAA 90 bp CAATCTACTACTAGAAAACACTCATGCCATGGCCCACAGACCCAAGAGTCAAGGGGCAGTTTCTTTGCTTaGCAGGCGGCAAGGCAGGAG +
Preference number: 5 (lower is better)
Translates to: QSTTRKHSCHGPQTQESRGSFFA*QAARQE
Trigger: CTCCTGCCTTGCCGCCTGCAAAGCAAAGAAACTGCC...CCTTGACTCTTGGGTCTGTGGGCCATGGCATGAGTGTTTTCTAGTAGTAGATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
CDS-3UTR CAA 90 bp CAGCATCATGCACACAGCATCAGGTTATTTAAAACAACACGCCTGTGGGACCCCGTGAGAGCAAAGGCTTaGCTCATCAGCCAGCCAGTC +
Preference number: 5 (lower is better)
Translates to: QHHAHSIRLFKTTRLWDPVRAKA*LISQPV
Trigger: GACTGGCTGGCTGATGAGCAAAGCCTTTGCTCTCAC...GGGGTCCCACAGGCGTGTTGTTTTAAATAACCTGATGCTGTGTGCATGATGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
CDS-3UTR CAA 90 bp CAAGGCAGGAGGCGCAGGCCTCTTCATTGTTCACATGTCACAGGAGGAGGCTCTAAGTTAAGCAAGGACTaGGAAAAGGGTTCCTGTCCA +
Preference number: 5 (lower is better)
Translates to: QGRRRRPLHCSHVTGGGSKLSKD*EKGSCP
Trigger: TGGACAGGAACCCTTTTCCAAGTCCTTGCTTAACTT...AGAGCCTCCTCCTGTGACATGTGAACAATGAAGAGGCCTGCGCCTCCTGCCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476258.5
CDS-3UTR CAA 90 bp TGCTTCACTGCTTTTAGTTCCAGGCAGTTTCATTGTACATCCAAGCCTTCCTCTCTCCCTTTGTGCCACTaGGCCAGGACCCCGAGGGTA +
Preference number: 5 (lower is better)
Translates to: CFTAFSSRQFHCTSKPSSLPLCH*ARTPRV
Trigger: TACCCTCGGGGTCCTGGCCAAGTGGCACAAAGGGAG...AGAGGAAGGCTTGGATGTACAATGAAACTGCCTGGAACTAAAAGCAGTGAAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482348.5
CDS-3UTR CAA 90 bp GTGAGAGCAAAGGCTTTGCTCATCAGCCAGCCAGTCTTGTTACTATCTGGCTACCCTAACCCGCCGGCATaGGCCGATTCAAATGAATTC +
Preference number: 5 (lower is better)
Translates to: VRAKALLISQPVLLLSGYPNPPA*ADSNEF
Trigger: GAATTCATTTGAATCGGCCAATGCCGGCGGGTTAGG...GTAGCCAGATAGTAACAAGACTGGCTGGCTGATGAGCAAAGCCTTTGCTCTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304834.11
ENST00000356033.8
CDS-3UTR CAA 90 bp TGCCATGGCCCACAGACCCAAGAGTCAAGGACAGAGAGAAACCTGTTCTTCAAAAGAAGTCTCCGGAGCTaGCTTCAGAGGAGTTCCTTC +
Preference number: 5 (lower is better)
Translates to: CHGPQTQESRTERNLFFKRSLRS*LQRSSF
Trigger: GAAGGAACTCCTCTGAAGCAAGCTCCGGAGACTTCT...TTTGAAGAACAGGTTTCTCTCTGTCCTTGACTCTTGGGTCTGTGGGCCATGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000470924.5
ENST00000476258.5
ENST00000482348.5
CDS-3UTR CAA 90 bp CTGCGTGAGAGCAAAGGCTTTGCTCATCAGCCAGCCAGTCTTGTTACTATCTGGTTATGGTCTGTCCAGTaGAGGCTTGGTAAACCCAAG +
Preference number: 5 (lower is better)
Translates to: LRESKGFAHQPASLVTIWLWSVQ*RLGKPK
Trigger: CTTGGGTTTACCAAGCCTCAACTGGACAGACCATAA...CCAGATAGTAACAAGACTGGCTGGCTGATGAGCAAAGCCTTTGCTCTCACGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
CDS-3UTR CAA 90 bp CTGCGTGAGAGCAAAGGCTTTGCTCATCAGCCAGCCAGTCTTGTTACTATCTGGTTCCAGGCAGTTTCATaGTACATCCAAGCCTTCCTC +
Preference number: 5 (lower is better)
Translates to: LRESKGFAHQPASLVTIWFQAVS*YIQAFL
Trigger: GAGGAAGGCTTGGATGTACAATGAAACTGCCTGGAA...CCAGATAGTAACAAGACTGGCTGGCTGATGAGCAAAGCCTTTGCTCTCACGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
CDS TCA 90 bp CCACCTGGAGGCCGCAAAACTCTTAAAGAACAGTGTGCAATTAGCTaGGACAATGTGGACACCTTCCACAGAATCCAAACCCTTCCACCA +
Preference number: 5 (lower is better)
Translates to: PPGGRKTLKEQCAIS*DNVDTFHRIQTLPP
Trigger: TGGTGGAAGGGTTTGGATTCTGTGGAAGGTGTCCACATTGTCTCAGCTAATTGCACACTGTTCTTTAAGAGTTTTGCGGCCTCCAGGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476258.5
CDS-3UTR CAA 90 bp TGCTTCACTGCTTTTAGTTCCAGGCAGTTTCATTGTACATCCAAGCCTTCCTCTGCGCAGGCCTCTTCATaGTTCACATGTCACAGGAGG +
Preference number: 5 (lower is better)
Translates to: CFTAFSSRQFHCTSKPSSAQASS*FTCHRR
Trigger: CCTCCTGTGACATGTGAACAATGAAGAGGCCTGCGC...AGAGGAAGGCTTGGATGTACAATGAAACTGCCTGGAACTAAAAGCAGTGAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
CDS-3UTR CAA 90 bp CTTCCTCTGCGTGAGAGCAAAGGCTTTGCTCATCAGCCAGCCAGTCTTGTTACTATCAGCCAGCCAGTCTaGTTACTATCTGGCTACTTT +
Preference number: 5 (lower is better)
Translates to: LPLRESKGFAHQPASLVTISQPV*LLSGYF
Trigger: AAAGTAGCCAGATAGTAACAAGACTGGCTGGCTGAT...AGTAACAAGACTGGCTGGCTGATGAGCAAAGCCTTTGCTCTCACGCAGAGGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
CDS-3UTR CAA 90 bp ATCATGCACACAGCATCAGGTTATTTAAAACAACACGCCTGTGGGACCCCGTTCTTATGGTCTGTCCAGTaGAGGCTTGGTAAACCCAAG +
Preference number: 5 (lower is better)
Translates to: IMHTASGYLKQHACGTPFLWSVQ*RLGKPK
Trigger: CTTGGGTTTACCAAGCCTCAACTGGACAGACCATAA...GAACGGGGTCCCACAGGCGTGTTGTTTTAAATAACCTGATGCTGTGTGCATGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
CDS-3UTR CAA 90 bp CTTTTAGTTCCAGGCAGTTTCATTGTACATCCAAGCCTTCCTCTGCGTGAGAGCTTCCAGGCAGTTTCATaGTACATCCAAGCCTTCCTC +
Preference number: 5 (lower is better)
Translates to: LLVPGSFIVHPSLPLRESFQAVS*YIQAFL
Trigger: GAGGAAGGCTTGGATGTACAATGAAACTGCCTGGAA...GCTCTCACGCAGAGGAAGGCTTGGATGTACAATGAAACTGCCTGGAACTAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
CDS GCA 90 bp CATTTCCCATGCTTTCCTCCTAAGGCTCAATTGCTGAGTGAGGCGTaGTTTTTGTTCCCAAGTTCTCTAACCCCTGTGAGATATGGCTAT +
Preference number: 5 (lower is better)
Translates to: HFPCFPPKAQLLSEA*FLFPSSLTPVRYGY
Trigger: ATAGCCATATCTCACAGGGGTTAGAGAACTTGGGAACAAAAAGCACGCCTCACTCAGCAATTGAGCCTTAGGAGGAAAGCATGGGAAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482348.5
CDS-3UTR CAA 90 bp CATGGCCCACAGACCCAAGAGTCAAGGACAGAGAGAAACCTGTTCTTCAAAAGAATTCTTTCATTCCTATaGGCTCTCTGGAGTGCCAAG +
Preference number: 5 (lower is better)
Translates to: HGPQTQESRTERNLFFKRILSFL*ALWSAK
Trigger: CTTGGCACTCCAGAGAGCCAATAGGAATGAAAGAAT...TCTTTTGAAGAACAGGTTTCTCTCTGTCCTTGACTCTTGGGTCTGTGGGCCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304834.11
ENST00000356033.8
CDS-3UTR CAA 90 bp CATGGCCCACAGACCCAAGAGTCAAGGACAGAGAGAAACCTGTTCTTCAAAAGAATCAGCCAGCCAGTCTaGTTACTATCTGGCTACTTT +
Preference number: 5 (lower is better)
Translates to: HGPQTQESRTERNLFFKRISQPV*LLSGYF
Trigger: AAAGTAGCCAGATAGTAACAAGACTGGCTGGCTGAT...TCTTTTGAAGAACAGGTTTCTCTCTGTCCTTGACTCTTGGGTCTGTGGGCCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
CDS-3UTR CAA 90 bp GGCCCACAGACCCAAGAGTCAAGGACAGAGAGAAACCTGTTCTTCAAAAGAAAATTCCAGGCAGTTTCATaGTACATCCAAGCCTTCCTC +
Preference number: 5 (lower is better)
Translates to: GPQTQESRTERNLFFKRKFQAVS*YIQAFL
Trigger: GAGGAAGGCTTGGATGTACAATGAAACTGCCTGGAA...TTTTCTTTTGAAGAACAGGTTTCTCTCTGTCCTTGACTCTTGGGTCTGTGGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000476258.5
ENST00000482348.5
CDS TCA 90 bp CCAGACATAACTGTAACCCACCTTAAAGAACAGTGTGCAATTAGCTaGGACAATGTGGACACCTTCCACAGAATCCAAACCCTTCCACCA +
Preference number: 5 (lower is better)
Translates to: PDITVTHLKEQCAIS*DNVDTFHRIQTLPP
Trigger: TGGTGGAAGGGTTTGGATTCTGTGGAAGGTGTCCACATTGTCTCAGCTAATTGCACACTGTTCTTTAAGGTGGGTTACAGTTATGTCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482348.5
CDS-3UTR CAA 90 bp GTTTCATTGTACATCCAAGCCTTCCTCTGCGTGAGAGCAAAGGCTTTGCTCATCGTGGATATTGTTTACTaGAAGCAACAGTCCAGGATT +
Preference number: 5 (lower is better)
Translates to: VSLYIQAFLCVRAKALLIVDIVY*KQQSRI
Trigger: AATCCTGGACTGTTGCTTCAAGTAAACAATATCCAC...GATGAGCAAAGCCTTTGCTCTCACGCAGAGGAAGGCTTGGATGTACAATGAAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409753.8
ENST00000476258.5
CDS-3UTR CAA 90 bp GAGCAAAGGCTTTGCTCATCAGCCAGCCAGTCTTGTTACTATCTGGCTACTTTTGTGGATATTGTTTACTaGAAGCAACAGTCCAGGATT +
Preference number: 5 (lower is better)
Translates to: EQRLCSSASQSCYYLATFVDIVY*KQQSRI
Trigger: AATCCTGGACTGTTGCTTCAAGTAAACAATATCCAC...AAAAGTAGCCAGATAGTAACAAGACTGGCTGGCTGATGAGCAAAGCCTTTGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409753.8
ENST00000476258.5
CDS GCA 72 bp CGCTGGGAAACTCCACACCCAACAGCCGACCACCGCTaGAGGAGCCGCCGCTGCCGCCTGTCCGGCCGATCG +
Preference number: 6 (lower is better)
Translates to: RWETPHPTADHR*RSRRCRLSGRS
Trigger: CGATCGGCCGGACAGGCGGCAGCGGCGGCTCCTGCAGCGGTGGTCGGCTGTTGGGTGTGGAGTTTCCCAGCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304834.11
ENST00000356033.8
CDS GCA 72 bp CCGGACCTGATCGATCCGGTCTCCGGATCCAATGGCTaGGCGCGAGAGCGAGACCAACCGCATGCCACGGGG +
Preference number: 6 (lower is better)
Translates to: PDLIDPVSGSNG*ARERDQPHATG
Trigger: CCCCGTGGCATGCGGTTGGTCTCGCTCTCGCGCGCAGCCATTGGATCCGGAGACCGGATCGATCAGGTCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476258.5
CDS CCA 72 bp CCCGCCGGACCTGATCGATCCGGTCTCCGGATCCAATaGCTGCGCGCGAGAGCGAGACCAACCGCATGCCAC +
Preference number: 6 (lower is better)
Translates to: PAGPDRSGLRIQ*LRARARPTACH
Trigger: GTGGCATGCGGTTGGTCTCGCTCTCGCGCGCAGCCATTGGATCCGGAGACCGGATCGATCAGGTCCGGCGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476258.5
CDS GCA 72 bp ATCCAATGGCTGCGCGCGAGAGCGAGACCAACCGCATaGCACGGGGGAGAGACAGGAGCGCGTGGCCCATCA +
Preference number: 6 (lower is better)
Translates to: IQWLRARARPTA*HGGETGARGPS
Trigger: TGATGGGCCACGCGCTCCTGTCTCTCCCCCGTGGCATGCGGTTGGTCTCGCTCTCGCGCGCAGCCATTGGAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476258.5
CDS CCA 72 bp GAGCAGAACGCTCAAAGGGTCGGACCCGAGGGGCGCTaGGAAACTCCACACCCAACAGCCGACCACCGCTGC +
Preference number: 6 (lower is better)
Translates to: EQNAQRVGPEGR*ETPHPTADHRC
Trigger: GCAGCGGTGGTCGGCTGTTGGGTGTGGAGTTTCCCAGCGCCCCTCGGGTCCGACCCTTTGAGCGTTCTGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304834.11
ENST00000356033.8
ENST00000409753.8
ENST00000465454.1
ENST00000581874.1
CDS GCA 72 bp GCCAAGCCCACCACCCTGGGGATGCACCAGCCGGGATaGACACAGGAGAAAGCGAAGCCCTCCCCGAAGGTT +
Preference number: 6 (lower is better)
Translates to: AKPTTLGMHQPG*TQEKAKPSPKV
Trigger: AACCTTCGGGGAGGGCTTCGCTTTCTCCTGTGTGCATCCCGGCTGGTGCATCCCCAGGGTGGTGGGCTTGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476258.5
CDS CCA 72 bp CACACATGCACCTGTCAGGTAGGTCCGAATAAGGAGTaGGGGCACGGCGAGGGTAAGGAGCCCGCCGGACCT +
Preference number: 6 (lower is better)
Translates to: HTCTCQVGPNKE*GHGEGKEPAGP
Trigger: AGGTCCGGCGGGCTCCTTACCCTCGCCGTGCCCCCACTCCTTATTCGGACCTACCTGACAGGTGCATGTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476258.5
CDS CCA 72 bp ACCAACCGCATGCCACGGGGGAGAGACAGGAGCGCGTaGCCCATCAATGGGACAATAGGACCTGACCATGCA +
Preference number: 6 (lower is better)
Translates to: TNRMPRGRDRSA*PINGTIGPDHA
Trigger: TGCATGGTCAGGTCCTATTGTCCCATTGATGGGCCACGCGCTCCTGTCTCTCCCCCGTGGCATGCGGTTGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476258.5
CDS GCA 72 bp GGAGGTGGAGGTTGTGGTGTGCCAAGATGGCACCACTaGACTCTGTACTCCAGCCTGCTGACTTGGCCCAAG +
Preference number: 6 (lower is better)
Translates to: GGGGCGVPRWHH*TLYSSLLTWPK
Trigger: CTTGGGCCAAGTCAGCAGGCTGGAGTACAGAGTGCAGTGGTGCCATCTTGGCACACCACAACCTCCACCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465454.1
CDS GCA 72 bp TTCATTCCTATTGGCTCTCTGGAGTGCCAAGCACCATaGGGCATTACGATGGGCTGTGGCGGCCACGGCTCA +
Preference number: 6 (lower is better)
Translates to: FIPIGSLECQAP*GITMGCGGHGS
Trigger: TGAGCCGTGGCCGCCACAGCCCATCGTAATGCCGCATGGTGCTTGGCACTCCAGAGAGCCAATAGGAATGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304834.11
ENST00000356033.8
CDS CCA 72 bp TTGAACTCGGGAGGTGGAGGTTGTGGTGTGCCAAGATaGCACCACTGCACTCTGTACTCCAGCCTGCTGACT +
Preference number: 6 (lower is better)
Translates to: LNSGGGGCGVPR*HHCTLYSSLLT
Trigger: AGTCAGCAGGCTGGAGTACAGAGTGCAGTGGTGCCATCTTGGCACACCACAACCTCCACCTCCCGAGTTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465454.1
CDS TCA 72 bp AGAAACCTCCTCCTGCAAGGGAACCAGGGCCAGGGATaGACTCACTGGGCAAACGTCAAAGGAGGAAGCGAA +
Preference number: 6 (lower is better)
Translates to: RNLLLQGNQGQG*THWANVKGGSE
Trigger: TTCGCTTCCTCCTTTGACGTTTGCCCAGTGAGTTCATCCCTGGCCCTGGTTCCCTTGCAGGAGGAGGTTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476258.5
CDS TCA 72 bp GTGCCACTTGGCCAGGACCCCGAGGGTAGCCACACATaGATGCAGGTCATAATCGATGTAAAATACATGCTC +
Preference number: 6 (lower is better)
Translates to: VPLGQDPEGSHT*MQVIIDVKYML
Trigger: GAGCATGTATTTTACATCGATTATGACCTGCATTCATGTGTGGCTACCCTCGGGGTCCTGGCCAAGTGGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482348.5
CDS CAA 72 bp CCTCCTAAGGCTCAATTGCTGAGTGAGGCGTGCTTTTaGTTCCCAAGTTCTCTAACCCCTGTGAGATATGGC +
Preference number: 6 (lower is better)
Translates to: PPKAQLLSEACF*FPSSLTPVRYG
Trigger: GCCATATCTCACAGGGGTTAGAGAACTTGGGAACAAAAAGCACGCCTCACTCAGCAATTGAGCCTTAGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482348.5
CDS CAA 90 bp TTCCACAGAATCCAAACCCTTCCACCAAGTAAGTTAAGCAAGGACTaGGAAAAGGGTTCCTGTCCAAACACTGTACCCAGTGCCCCAAGC +
Preference number: 6 (lower is better)
Translates to: FHRIQTLPPSKLSKD*EKGSCPNTVPSAPS
Trigger: GCTTGGGGCACTGGGTACAGTGTTTGGACAGGAACCCTTTTCCAAGTCCTTGCTTAACTTACTTGGTGGAAGGGTTTGGATTCTGTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476258.5
CDS GCA 72 bp TGCTTTCCTCCTAAGGCTCAATTGCTGAGTGAGGCGTaGTTTTTGTTCCCAAGTTCTCTAACCCCTGTGAGA +
Preference number: 6 (lower is better)
Translates to: CFPPKAQLLSEA*FLFPSSLTPVR
Trigger: TCTCACAGGGGTTAGAGAACTTGGGAACAAAAAGCACGCCTCACTCAGCAATTGAGCCTTAGGAGGAAAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482348.5
CDS CAA 90 bp CCATGCTTTCCTCCTAAGGCTCAATTGCTGAGTGAGGCGTGCTTTTaGTTCCCAAGTTCTCTAACCCCTGTGAGATATGGCTATTTCACG +
Preference number: 6 (lower is better)
Translates to: PCFPPKAQLLSEACF*FPSSLTPVRYGYFT
Trigger: CGTGAAATAGCCATATCTCACAGGGGTTAGAGAACTTGGGAACAAAAAGCACGCCTCACTCAGCAATTGAGCCTTAGGAGGAAAGCATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482348.5
CDS CAA 90 bp GTTGTAAAGGAATGTCATTTCCCATGCTTTCCTCCTAAGGCTCAATaGCTGAGTGAGGCGTGCTTTTTGTTCCCAAGTTCTCTAACCCCT +
Preference number: 6 (lower is better)
Translates to: VVKECHFPCFPPKAQ*LSEACFLFPSSLTP
Trigger: AGGGGTTAGAGAACTTGGGAACAAAAAGCACGCCTCACTCAGCAATTGAGCCTTAGGAGGAAAGCATGGGAAATGACATTCCTTTACAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482348.5
CDS GCA 72 bp TCTACTAAAAATATAAAAATTGGCTGGACGTCATGGTaGATGCTTGTAATCCTAGCTACTCGGGAGGCTGAG +
Preference number: 6 (lower is better)
Translates to: STKNIKIGWTSW*MLVILATREAE
Trigger: CTCAGCCTCCCGAGTAGCTAGGATTACAAGCATGCACCATGACGTCCAGCCAATTTTTATATTTTTAGTAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000465454.1
CDS CCA 72 bp GTCTCTACTAAAAATATAAAAATTGGCTGGACGTCATaGTGCATGCTTGTAATCCTAGCTACTCGGGAGGCT +
Preference number: 6 (lower is better)
Translates to: VSTKNIKIGWTS*CMLVILATREA
Trigger: AGCCTCCCGAGTAGCTAGGATTACAAGCATGCACCATGACGTCCAGCCAATTTTTATATTTTTAGTAGAGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000465454.1
CDS CAA 72 bp AACTCTAGTCTTTTTGACCTTGTAAACCTGAAAGTATaGAGTTGTAAAGGAATGTCATTTCCCATGCTTTCC +
Preference number: 6 (lower is better)
Translates to: NSSLFDLVNLKV*SCKGMSFPMLS
Trigger: GGAAAGCATGGGAAATGACATTCCTTTACAACTCAATACTTTCAGGTTTACAAGGTCAAAAAGACTAGAGTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000482348.5