RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for JPH2 (Homo sapiens)

Ensembl gene IDs: ENSG00000149596

Ensembl transcript IDs: ENST00000342272.3, ENST00000372980.4

Found 713 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGGCGCTTCTCTCTGGGCTCTCCTTGCCCCTGGGTAGAGAGCTCCTaGAGGAGCCCAGGACATTCCATTCCTCTTGGCACCACCACCGCC +
Preference number: 1 (lower is better)
Translates to: GRFSLGSPCPWVESS*RSPGHSIPLGTTTA
Trigger: GGCGGTGGTGGTGCCAAGAGGAATGGAATGTCCTGGGCTCCTTCAGGAGCTCTCTACCCAGGGGCAAGGAGAGCCCAGAGAGAAGCGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR TCA 90 bp GCTGGGTTGGGTAGGGGAGCCAGGCTCCTGAGGACAGGGTGTGCCTaGACTCGAGCCTACTGTTGGTTGAGGGACCTTCTTCTCCAACCC +
Preference number: 1 (lower is better)
Translates to: AGLGRGARLLRTGCA*TRAYCWLRDLLLQP
Trigger: GGGTTGGAGAAGAAGGTCCCTCAACCAACAGTAGGCTCGAGTTCAGGCACACCCTGTCCTCAGGAGCCTGGCTCCCCTACCCAACCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR GCA 90 bp AAAATGAGACTCGGCATTCCTCATGAGGGTGTGGAGGGCAGGGCCTaGTCCGGGGAACAGCTGCTGGGCACGGAATTAGCAGGTCCCGGA +
Preference number: 1 (lower is better)
Translates to: KMRLGIPHEGVEGRA*SGEQLLGTELAGPG
Trigger: TCCGGGACCTGCTAATTCCGTGCCCAGCAGCTGTTCCCCGGAGCAGGCCCTGCCCTCCACACCCTCATGAGGAATGCCGAGTCTCATTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000342272.3
3UTR GCA 90 bp GACCACGGGGCTCCAGGTCCAGAGTCCAGTCCTCTTTGGCCACCCTaGCTGGCACTGCAAAAAGACGGGTCCTCATGTCCTCAGCAGGAA +
Preference number: 1 (lower is better)
Translates to: DHGAPGPESSPLWPP*LALQKDGSSCPQQE
Trigger: TTCCTGCTGAGGACATGAGGACCCGTCTTTTTGCAGTGCCAGGCAGGGTGGCCAAAGAGGACTGGACTCTGGACCTGGAGCCCCGTGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR GCA 90 bp TCCTGCCACCAACTTGCTGTGTGCGTGACCTTGGGCAAGTCCCTCTaGTCTAAGCCTCTGTGGAATGTGGCGATCCCCTCAGGCTCCCCC +
Preference number: 1 (lower is better)
Translates to: SCHQLAVCVTLGKSL*SKPLWNVAIPSGSP
Trigger: GGGGGAGCCTGAGGGGATCGCCACATTCCACAGAGGCTTAGAGCAGAGGGACTTGCCCAAGGTCACGCACACAGCAAGTTGGTGGCAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR GCA 90 bp GGGTCTGCTGTGCTCTCCTGGGGTCTCCATAGAATGCCCAGAAGCTaGCAAGACAGCAGCTCAGCTGACTGTCACGCTGATGCCTGGCTG +
Preference number: 1 (lower is better)
Translates to: GSAVLSWGLHRMPRS*QDSSSADCHADAWL
Trigger: CAGCCAGGCATCAGCGTGACAGTCAGCTGAGCTGCTGTCTTGGCAGCTTCTGGGCATTCTATGGAGACCCCAGGAGAGCACAGCAGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342272.3
3UTR GCA 90 bp TGGCCTGGAGCAGGGGTCACTCTGGAGTTCCTAGCACACCTGGGCTaGTCTGTGGATTCTGCCAGGCACAGATCTGTGCCAGGCAACTCT +
Preference number: 1 (lower is better)
Translates to: WPGAGVTLEFLAHLG*SVDSARHRSVPGNS
Trigger: AGAGTTGCCTGGCACAGATCTGTGCCTGGCAGAATCCACAGAGCAGCCCAGGTGTGCTAGGAACTCCAGAGTGACCCCTGCTCCAGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342272.3
3UTR CCA 90 bp ACGGGGCTCCAGGTCCAGAGTCCAGTCCTCTTTGGCCACCCTGCCTaGCACTGCAAAAAGACGGGTCCTCATGTCCTCAGCAGGAACTTC +
Preference number: 1 (lower is better)
Translates to: TGLQVQSPVLFGHPA*HCKKTGPHVLSRNF
Trigger: GAAGTTCCTGCTGAGGACATGAGGACCCGTCTTTTTGCAGTGCCAGGCAGGGTGGCCAAAGAGGACTGGACTCTGGACCTGGAGCCCCGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR CCA 90 bp TGTGAACTGGACCACGGGGCTCCAGGTCCAGAGTCCAGTCCTCTTTaGCCACCCTGCCTGGCACTGCAAAAAGACGGGTCCTCATGTCCT +
Preference number: 1 (lower is better)
Translates to: CELDHGAPGPESSPL*PPCLALQKDGSSCP
Trigger: AGGACATGAGGACCCGTCTTTTTGCAGTGCCAGGCAGGGTGGCCAAAGAGGACTGGACTCTGGACCTGGAGCCCCGTGGTCCAGTTCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR CCA 90 bp TGGCTCAGCTTGGATGCCACGTCCTTCCCCAGGCTTGGAGGGGCCTaGAAGCCCTTTCTCTCCATTCTCCTGGAGGCAGGAAACCATAGC +
Preference number: 1 (lower is better)
Translates to: WLSLDATSFPRLGGA*KPFLSILLEAGNHS
Trigger: GCTATGGTTTCCTGCCTCCAGGAGAATGGAGAGAAAGGGCTTCCAGGCCCCTCCAAGCCTGGGGAAGGACGTGGCATCCAAGCTGAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR GCA 90 bp CCCGCCCCATTCCCCTCATGCTCCAGGAGTCTTGAGAAGCTCAGATaGAGATGCAGAGCTGTGGGCCATGGCCAGCTGAGGATGGAAGAA +
Preference number: 1 (lower is better)
Translates to: PAPFPSCSRSLEKLR*RCRAVGHGQLRMEE
Trigger: TTCTTCCATCCTCAGCTGGCCATGGCCCACAGCTCTGCATCTGCATCTGAGCTTCTCAAGACTCCTGGAGCATGAGGGGAATGGGGCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR GCA 90 bp ATCCCAAATCTGACTCCCACGGTTCCTAGGTCCCCTCCCTTTCACTaGCCTGGAAGAGTCCTGCAGAGACCTCAAGGCAGTGGGCCAGCA +
Preference number: 1 (lower is better)
Translates to: IPNLTPTVPRSPPFH*PGRVLQRPQGSGPA
Trigger: TGCTGGCCCACTGCCTTGAGGTCTCTGCAGGACTCTTCCAGGGCAGTGAAAGGGAGGGGACCTAGGAACCGTGGGAGTCAGATTTGGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR TCA 90 bp GTCAAGATTAGAAGAGGAGGCATCGGCCTGGCTGTGTCCTACCCTTaGGCCAACAGGGGGTGCTGTCTCCGACTAACCCTACCTGGCTCT +
Preference number: 1 (lower is better)
Translates to: VKIRRGGIGLAVSYP*ANRGCCLRLTLPGS
Trigger: AGAGCCAGGTAGGGTTAGTCGGAGACAGCACCCCCTGTTGGCTCAAGGGTAGGACACAGCCAGGCCGATGCCTCCTCTTCTAATCTTGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR GCA 90 bp GCACCCAGGCTGTACCCAGTTGGAGCCCCAGACTTGCCCCTCTCTTaGCGGGAAATGCTTCTTGACAAGCAGCTTGTCTTCAACACCTGC +
Preference number: 1 (lower is better)
Translates to: APRLYPVGAPDLPLS*REMLLDKQLVFNTC
Trigger: GCAGGTGTTGAAGACAAGCTGCTTGTCAAGAAGCATTTCCCGGCAAGAGAGGGGCAAGTCTGGGGCTCCAACTGGGTACAGCCTGGGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR CCA 90 bp AAGCCCTTTCTCTCCATTCTCCTGGAGGCAGGAAACCATAGCCTTTaGCCCTCACCCCACCCACAGGAAGCACAAGGGCCCAGAGACCTA +
Preference number: 1 (lower is better)
Translates to: KPFLSILLEAGNHSL*PSPHPQEAQGPRDL
Trigger: TAGGTCTCTGGGCCCTTGTGCTTCCTGTGGGTGGGGTGAGGGCCAAAGGCTATGGTTTCCTGCCTCCAGGAGAATGGAGAGAAAGGGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR TCA 90 bp GACCTACGGCCACCTGACTCCATTGAGTGTACCAGCAAGACAGGCTaGGAGAGTGAGGGAGTGGGAACTGGCCTCCATAGGCATAGTCAG +
Preference number: 1 (lower is better)
Translates to: DLRPPDSIECTSKTG*ESEGVGTGLHRHSQ
Trigger: CTGACTATGCCTATGGAGGCCAGTTCCCACTCCCTCACTCTCTCAGCCTGTCTTGCTGGTACACTCAATGGAGTCAGGTGGCCGTAGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR GCA 90 bp TGTTCTGCTAAGGGTCTGCTGTGCTCTCCTGGGGTCTCCATAGAATaGCCAGAAGCTGCCAAGACAGCAGCTCAGCTGACTGTCACGCTG +
Preference number: 1 (lower is better)
Translates to: CSAKGLLCSPGVSIE*PEAAKTAAQLTVTL
Trigger: CAGCGTGACAGTCAGCTGAGCTGCTGTCTTGGCAGCTTCTGGGCATTCTATGGAGACCCCAGGAGAGCACAGCAGACCCTTAGCAGAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342272.3
3UTR TCA 90 bp ACTTATTCACTACCACGAGAACGGCACGGGAAAGGCTTGCCCCCATaGTTCAATTACCTCCCACTGGGTCCCTCCCACAACGTGTGGGTG +
Preference number: 1 (lower is better)
Translates to: TYSLPRERHGKGLPP*FNYLPLGPSHNVWV
Trigger: CACCCACACGTTGTGGGAGGGACCCAGTGGGAGGTAATTGAATCATGGGGGCAAGCCTTTCCCGTGCCGTTCTCGTGGTAGTGAATAAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR GCA 90 bp GGTCACTCTGGAGTTCCTAGCACACCTGGGCTGCTCTGTGGATTCTaGCAGGCACAGATCTGTGCCAGGCAACTCTCATCAGTTCCCTTT +
Preference number: 1 (lower is better)
Translates to: GHSGVPSTPGLLCGF*QAQICARQLSSVPF
Trigger: AAAGGGAACTGATGAGAGTTGCCTGGCACAGATCTGTGCCTGGCAGAATCCACAGAGCAGCCCAGGTGTGCTAGGAACTCCAGAGTGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342272.3
3UTR GCA 90 bp ATGCTTCTTGACAAGCAGCTTGTCTTCAACACCTGCCTTAGTGTCTaGCCCAGGGACATCTCCCTGGGCTTCCATGGGCTTCTGTGCTCC +
Preference number: 1 (lower is better)
Translates to: MLLDKQLVFNTCLSV*PRDISLGFHGLLCS
Trigger: GGAGCACAGAAGCCCATGGAAGCCCAGGGAGATGTCCCTGGGGCAGACACTAAGGCAGGTGTTGAAGACAAGCTGCTTGTCAAGAAGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR GCA 90 bp CCATTCCCCTCATGCTCCAGGAGTCTTGAGAAGCTCAGATGCAGATaGAGAGCTGTGGGCCATGGCCAGCTGAGGATGGAAGAATCTGCA +
Preference number: 1 (lower is better)
Translates to: PFPSCSRSLEKLRCR*RAVGHGQLRMEESA
Trigger: TGCAGATTCTTCCATCCTCAGCTGGCCATGGCCCACAGCTCTGCATCTGCATCTGAGCTTCTCAAGACTCCTGGAGCATGAGGGGAATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR GCA 90 bp CATTGCAGCCCAGCCAGAGCCCGTGAGCAGATGCGGGTTTATTATTaGACAGACTGCAGCATCCTGAACCCCAAACCCAACCCCAAACAC +
Preference number: 1 (lower is better)
Translates to: HCSPARAREQMRVYY*TDCSILNPKPNPKH
Trigger: GTGTTTGGGGTTGGGTTTGGGGTTCAGGATGCTGCAGTCTGTGCAATAATAAACCCGCATCTGCTCACGGGCTCTGGCTGGGCTGCAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR TCA 90 bp ACCTGGTCAAGACAGCCTGGAGTGAATGGTGAATGTTCTGACACATaGGGTGCCCTGGCATCTGTTGCCGTACATGAGGGTCTCACCTGC +
Preference number: 1 (lower is better)
Translates to: TWSRQPGVNGECSDT*GALASVAVHEGLTC
Trigger: GCAGGTGAGACCCTCATGTACGGCAACAGATGCCAGGGCACCTCATGTGTCAGAACATTCACCATTCACTCCAGGCTGTCTTGACCAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR GCA 90 bp AAGCTCGATGAATCCCAGAAGCCTGGCCTCGGACAGGGGCACGTCTaGAGAGATTTGGCCAATCGGGCACATGAATCACTGAAAACAAGG +
Preference number: 1 (lower is better)
Translates to: KLDESQKPGLGQGHV*RDLANRAHESLKTR
Trigger: CCTTGTTTTCAGTGATTCATGTGCCCGATTGGCCAAATCTCTGCAGACGTGCCCCTGTCCGAGGCCAGGCTTCTGGGATTCATCGAGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000342272.3
3UTR GCA 90 bp AGCTCTATGGTCTTTCAGCCCCCACTCAAACTGAAGCCCTTCAGCTaGCCCTCAAGGATCGTGAGAACAAGGACACAGATGGGAAGGACC +
Preference number: 1 (lower is better)
Translates to: SSMVFQPPLKLKPFS*PSRIVRTRTQMGRT
Trigger: GGTCCTTCCCATCTGTGTCCTTGTTCTCACGATCCTTGAGGGGCAGCTGAAGGGCTTCAGTTTGAGTGGGGGCTGAAAGACCATAGAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR GCA 90 bp CAGATAACAATTCCCTCCCCATTTCCACTCCCACCTCCCCTCCTGTaGTTCCTCCAAGCCCATCCTTCCTGGAATCCCAGCATCATTCCA +
Preference number: 1 (lower is better)
Translates to: QITIPSPFPLPPPLL*FLQAHPSWNPSIIP
Trigger: TGGAATGATGCTGGGATTCCAGGAAGGATGGGCTTGGAGGAAGCACAGGAGGGGAGGTGGGAGTGGAAATGGGGAGGGAATTGTTATCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR CCA 90 bp CGAGCCTACTGTTGGTTGAGGGACCTTCTTCTCCAACCCCCTCGCTaGGAACCACCGGCTGTGAGAGTAACTTCATGGGCAGTACTTATT +
Preference number: 1 (lower is better)
Translates to: RAYCWLRDLLLQPPR*EPPAVRVTSWAVLI
Trigger: AATAAGTACTGCCCATGAAGTTACTCTCACAGCCGGTGGTTCCCAGCGAGGGGGTTGGAGAAGAAGGTCCCTCAACCAACAGTAGGCTCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR CCA 90 bp TGGCATCTGTTGCCGTACATGAGGGTCTCACCTGCAGTTGGTCTGTaGACAAAATATGACTCCCCGCTCAGTCCAGGCTCTGTCACTGAC +
Preference number: 1 (lower is better)
Translates to: WHLLPYMRVSPAVGL*TKYDSPLSPGSVTD
Trigger: GTCAGTGACAGAGCCTGGACTGAGCGGGGAGTCATATTTTGTCCACAGACCAACTGCAGGTGAGACCCTCATGTACGGCAACAGATGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR TCA 90 bp ATACAGTCCTGGATTCCAGCCAAGCCACAAGGTCCCAGCAGGGCTTaGAACGGCAAGTGTGAAGCTAAGGGAGAAGGTTCCCAAGCATTG +
Preference number: 1 (lower is better)
Translates to: IQSWIPAKPQGPSRA*NGKCEAKGEGSQAL
Trigger: CAATGCTTGGGAACCTTCTCCCTTAGCTTCACACTTGCCGTTTCAAGCCCTGCTGGGACCTTGTGGCTTGGCTGGAATCCAGGACTGTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR GCA 90 bp TGTACCCAGTTGGAGCCCCAGACTTGCCCCTCTCTTGCCGGGAAATaGTTCTTGACAAGCAGCTTGTCTTCAACACCTGCCTTAGTGTCT +
Preference number: 1 (lower is better)
Translates to: CTQLEPQTCPSLAGK*FLTSSLSSTPALVS
Trigger: AGACACTAAGGCAGGTGTTGAAGACAAGCTGCTTGTCAAGAAGCATTTCCCGGCAAGAGAGGGGCAAGTCTGGGGCTCCAACTGGGTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR GCA 90 bp GACACACCCCATCTGCAGACCGGCCAACTGGGCTGGCTGCCCACCTaGTTTCCCTCTGTGGGTTTTTATCAAAGGCTACAGATAACAATT +
Preference number: 1 (lower is better)
Translates to: DTPHLQTGQLGWLPT*FPSVGFYQRLQITI
Trigger: AATTGTTATCTGTAGCCTTTGATAAAAACCCACAGAGGGAAAGCAGGTGGGCAGCCAGCCCAGTTGGCCGGTCTGCAGATGGGGTGTGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR CCA 90 bp TCCATGGGGTCTCCCCTCGTCTATTGGTCCAGAAGGGAAGCTAACTaGACTGGTGGGAGGAGACAGAGCACTGTGTTCTGGGATATTCAA +
Preference number: 1 (lower is better)
Translates to: SMGSPLVYWSRREAN*TGGRRQSTVFWDIQ
Trigger: TTGAATATCCCAGAACACAGTGCTCTGTCTCCTCCCACCAGTCCAGTTAGCTTCCCTTCTGGACCAATAGACGAGGGGAGACCCCATGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR TCA 90 bp GTCCATCAGATTATGAAACTTCCCTTCTTGCCCGAATCCCAAATCTaGCTCCCACGGTTCCTAGGTCCCCTCCCTTTCACTGCCCTGGAA +
Preference number: 1 (lower is better)
Translates to: VHQIMKLPFLPESQI*LPRFLGPLPFTALE
Trigger: TTCCAGGGCAGTGAAAGGGAGGGGACCTAGGAACCGTGGGAGTCAGATTTGGGATTCGGGCAAGAAGGGAAGTTTCATAATCTGATGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR GCA 90 bp ATCAGTTTTTCAGGCATGGCACCTCCAAAGGTCATCATCTGGGCCTaGATCTCTCCCAGAACAGCCAGGTCTTCTGTGGGTCCATCAGAT +
Preference number: 1 (lower is better)
Translates to: ISFSGMAPPKVIIWA*ISPRTARSSVGPSD
Trigger: ATCTGATGGACCCACAGAAGACCTGGCTGTTCTGGGAGAGATGCAGGCCCAGATGATGACCTTTGGAGGTGCCATGCCTGAAAAACTGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR CCA 90 bp CTTCATATCAGTTTTTCAGGCATGGCACCTCCAAAGGTCATCATCTaGGCCTGCATCTCTCCCAGAACAGCCAGGTCTTCTGTGGGTCCA +
Preference number: 1 (lower is better)
Translates to: LHISFSGMAPPKVII*ACISPRTARSSVGP
Trigger: TGGACCCACAGAAGACCTGGCTGTTCTGGGAGAGATGCAGGCCCAGATGATGACCTTTGGAGGTGCCATGCCTGAAAAACTGATATGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR CCA 90 bp CCATATCACCCAGTAACAGAGCAAGGGAGGGGTATAAAAGCCCAATaGGAGATGCTCTACAAGCAATCCTTGCTCTGGAGCTCCCACTGG +
Preference number: 1 (lower is better)
Translates to: PYHPVTEQGRGIKAQ*EMLYKQSLLWSSHW
Trigger: CCAGTGGGAGCTCCAGAGCAAGGATTGCTTGTAGAGCATCTCCCATTGGGCTTTTATACCCCTCCCTTGCTCTGTTACTGGGTGATATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR CCA 90 bp AACGGCACGGGAAAGGCTTGCCCCCATGATTCAATTACCTCCCACTaGGTCCCTCCCACAACGTGTGGGTGGGAATTTAAGATGAGATTT +
Preference number: 1 (lower is better)
Translates to: NGTGKACPHDSITSH*VPPTTCGWEFKMRF
Trigger: AAATCTCATCTTAAATTCCCACCCACACGTTGTGGGAGGGACCCAGTGGGAGGTAATTGAATCATGGGGGCAAGCCTTTCCCGTGCCGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR TCA 90 bp AGGGGCACGTCTGCAGAGATTTGGCCAATCGGGCACATGAATCACTaGAAACAAGGCCGTGGACAGGAAAGACTAATACGGTCCGCTTTT +
Preference number: 1 (lower is better)
Translates to: RGTSAEIWPIGHMNH*KQGRGQERLIRSAF
Trigger: AAAAGCGGACCGTATTAGTCTTTCCTGTCCACGGCCTTGTTTTCAGTGATTCATGTGCCCGATTGGCCAAATCTCTGCAGACGTGCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342272.3
3UTR TCA 90 bp CATCTCTCCCAGAACAGCCAGGTCTTCTGTGGGTCCATCAGATTATaGAACTTCCCTTCTTGCCCGAATCCCAAATCTGACTCCCACGGT +
Preference number: 1 (lower is better)
Translates to: HLSQNSQVFCGSIRL*NFPSCPNPKSDSHG
Trigger: ACCGTGGGAGTCAGATTTGGGATTCGGGCAAGAAGGGAAGTTTCATAATCTGATGGACCCACAGAAGACCTGGCTGTTCTGGGAGAGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR TCA 90 bp AGCACAGCTCTGGGTTTCAGTCCCAGCTCTGTCCTTCCCTCTCTGTaGTACCTTGAACCAATCACTCCATCTCCCCAAGGCTCAATTTTC +
Preference number: 1 (lower is better)
Translates to: STALGFSPSSVLPSL*YLEPITPSPQGSIF
Trigger: GAAAATTGAGCCTTGGGGAGATGGAGTGATTGGTTCAAGGTATCACAGAGAGGGAAGGACAGAGCTGGGACTGAAACCCAGAGCTGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR GCA 90 bp CTGCAGAGACCTCAAGGCAGTGGGCCAGCATTGCTTTTAAGTTCATaGATGGTACAAACCACCTTAAATGCATTCCGGGCATGGCAGGAG +
Preference number: 1 (lower is better)
Translates to: LQRPQGSGPALLLSS*MVQTTLNAFRAWQE
Trigger: CTCCTGCCATGCCCGGAATGCATTTAAGGTGGTTTGTACCATGCATGAACTTAAAAGCAATGCTGGCCCACTGCCTTGAGGTCTCTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR GCA 90 bp CAATCCTTGCTCTGGAGCTCCCACTGGGTTGGACTTTGTCAGGCCTaGATCAAGTTAGACTTCTTCCTCTGCCCTGTTCTGCATTTTCCT +
Preference number: 1 (lower is better)
Translates to: QSLLWSSHWVGLCQA*IKLDFFLCPVLHFP
Trigger: AGGAAAATGCAGAACAGGGCAGAGGAAGAAGTCTAACTTGATGCAGGCCTGACAAAGTCCAACCCAGTGGGAGCTCCAGAGCAAGGATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR CCA 90 bp CCCTCACCCCACCCACAGGAAGCACAAGGGCCCAGAGACCTAGTGTaGTACAAAACATCTTTAAGTGAGGTACATCCAAGTAGCCATCTT +
Preference number: 1 (lower is better)
Translates to: PSPHPQEAQGPRDLV*YKTSLSEVHPSSHL
Trigger: AAGATGGCTACTTGGATGTACCTCACTTAAAGATGTTTTGTACCACACTAGGTCTCTGGGCCCTTGTGCTTCCTGTGGGTGGGGTGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR CCA 90 bp CTCCAACCCCCTCGCTGGGAACCACCGGCTGTGAGAGTAACTTCATaGGCAGTACTTATTCCTAAAAAGTCAAGAGAACTGCTTTCCTGC +
Preference number: 1 (lower is better)
Translates to: LQPPRWEPPAVRVTS*AVLIPKKSRELLSC
Trigger: GCAGGAAAGCAGTTCTCTTGACTTTTTAGGAATAAGTACTGCCCATGAAGTTACTCTCACAGCCGGTGGTTCCCAGCGAGGGGGTTGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR CCA 90 bp TCCCTTTCACTGCCCTGGAAGAGTCCTGCAGAGACCTCAAGGCAGTaGGCCAGCATTGCTTTTAAGTTCATGCATGGTACAAACCACCTT +
Preference number: 1 (lower is better)
Translates to: SLSLPWKSPAETSRQ*ASIAFKFMHGTNHL
Trigger: AAGGTGGTTTGTACCATGCATGAACTTAAAAGCAATGCTGGCCCACTGCCTTGAGGTCTCTGCAGGACTCTTCCAGGGCAGTGAAAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR CCA 90 bp TGGGACTCACAGTTCCAAGTGGCTAGGGAAGCCTCACAATCATGGTaGAAGACAAGGAGGAGCAAGTCACATCTTACTAGATGGCAGCAG +
Preference number: 1 (lower is better)
Translates to: WDSQFQVAREASQSW*KTRRSKSHLTRWQQ
Trigger: CTGCTGCCATCTAGTAAGATGTGACTTGCTCCTCCTTGTCTTCCACCATGATTGTGAGGCTTCCCTAGCCACTTGGAACTGTGAGTCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR TCA 90 bp CTGGGGTCTGAAGGGAGAGGGGGAGATTGTTCCCTCAGACTTTGCTaGCTTTACAGCCTCAAGATTGCTGACTTTACAGCCTCAAGATGT +
Preference number: 1 (lower is better)
Translates to: LGSEGRGGDCSLRLC*LYSLKIADFTASRC
Trigger: ACATCTTGAGGCTGTAAAGTCAGCAATCTTGAGGCTGTAAAGTCAGCAAAGTCTGAGGGAACAATCTCCCCCTCTCCCTTCAGACCCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR TCA 90 bp GAGGACACATGTAGTCCGTATTTCCCAGCCTCCCTTGAAGCTAGTTaGGGCCAAACAACTGAGCTCTGGCTAGTGGAATATGAGCAGAAG +
Preference number: 1 (lower is better)
Translates to: EDTCSPYFPASLEAS*GQTTELWLVEYEQK
Trigger: CTTCTGCTCATATTCCACTAGCCAGAGCTCAGTTGTTTGGCCTCAACTAGCTTCAAGGGAGGCTGGGAAATACGGACTACATGTGTCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR TCA 90 bp CTGCCTCTTATGGCCACCATATCCATTTCCTCAATAAGCACTCACTaGATGTCTACTCTGCCCCGAGACCTAAGTGGGACAATGGGGATG +
Preference number: 1 (lower is better)
Translates to: LPLMATISISSISTH*MSTLPRDLSGTMGM
Trigger: CATCCCCATTGTCCCACTTAGGTCTCGGGGCAGAGTAGACATTCAGTGAGTGCTTATTGAGGAAATGGATATGGTGGCCATAAGAGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR TCA 90 bp GTCCCTCCCACAACGTGTGGGTGGGAATTTAAGATGAGATTTGGGTaGGAACACAGCCAAACCATATCACCCAGTAACAGAGCAAGGGAG +
Preference number: 1 (lower is better)
Translates to: VPPTTCGWEFKMRFG*EHSQTISPSNRARE
Trigger: CTCCCTTGCTCTGTTACTGGGTGATATGGTTTGGCTGTGTTCTCACCCAAATCTCATCTTAAATTCCCACCCACACGTTGTGGGAGGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR GCA 90 bp TCATGGGCAGTACTTATTCCTAAAAAGTCAAGAGAACTGCTTTCCTaGCACCAACTTGCTGTGTGCGTGACCTTGGGCAAGTCCCTCTGC +
Preference number: 1 (lower is better)
Translates to: SWAVLIPKKSRELLS*HQLAVCVTLGKSLC
Trigger: GCAGAGGGACTTGCCCAAGGTCACGCACACAGCAAGTTGGTGGCAGGAAAGCAGTTCTCTTGACTTTTTAGGAATAAGTACTGCCCATGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR CCA 90 bp ACTAAACAACTGGTATCTGAATCACCTCCATCCCTTTGGGGTCCCTaGGATCCTCTACCAAAACGCAAGAGGGCTTGTAGCAGAGCTAAC +
Preference number: 1 (lower is better)
Translates to: TKQLVSESPPSLWGP*DPLPKRKRACSRAN
Trigger: GTTAGCTCTGCTACAAGCCCTCTTGCGTTTTGGTAGAGGATCCCAGGGACCCCAAAGGGATGGAGGTGATTCAGATACCAGTTGTTTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR TCA 90 bp GACTGGTGGGAGGAGACAGAGCACTGTGTTCTGGGATATTCAAACTaGCCTTGTCCATTTCCTCTACTGTCATCCAGAACATCTACAGGC +
Preference number: 1 (lower is better)
Translates to: DWWEETEHCVLGYSN*PCPFPLLSSRTSTG
Trigger: GCCTGTAGATGTTCTGGATGACAGTAGAGGAAATGGACAAGGTCAGTTTGAATATCCCAGAACACAGTGCTCTGTCTCCTCCCACCAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR GCA 90 bp AATAGAAATAATAAAAACATGGTACATGCCATCCAGAGTGTCCCCTaGAGGCTGCATGCAGCTGTCCAGCCTCCATGTGTGACTCCAGCT +
Preference number: 1 (lower is better)
Translates to: NRNNKNMVHAIQSVP*RLHAAVQPPCVTPA
Trigger: AGCTGGAGTCACACATGGAGGCTGGACAGCTGCATGCAGCCTGCAGGGGACACTCTGGATGGCATGTACCATGTTTTTATTATTTCTATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000342272.3
3UTR GCA 90 bp GCCAGCATTGCTTTTAAGTTCATGCATGGTACAAACCACCTTAAATaGATTCCGGGCATGGCAGGAGACCCATCAGACTTCCTAGAGCTG +
Preference number: 1 (lower is better)
Translates to: ASIAFKFMHGTNHLK*IPGMAGDPSDFLEL
Trigger: CAGCTCTAGGAAGTCTGATGGGTCTCCTGCCATGCCCGGAATGCATTTAAGGTGGTTTGTACCATGCATGAACTTAAAAGCAATGCTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR CCA 90 bp AGGGAAGCTAACTGGACTGGTGGGAGGAGACAGAGCACTGTGTTCTaGGATATTCAAACTGACCTTGTCCATTTCCTCTACTGTCATCCA +
Preference number: 1 (lower is better)
Translates to: REANWTGGRRQSTVF*DIQTDLVHFLYCHP
Trigger: TGGATGACAGTAGAGGAAATGGACAAGGTCAGTTTGAATATCCCAGAACACAGTGCTCTGTCTCCTCCCACCAGTCCAGTTAGCTTCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR CCA 90 bp GTCACTTATTTGGGGGAGAGCATCTTCATATCAGTTTTTCAGGCATaGCACCTCCAAAGGTCATCATCTGGGCCTGCATCTCTCCCAGAA +
Preference number: 1 (lower is better)
Translates to: VTYLGESIFISVFQA*HLQRSSSGPASLPE
Trigger: TTCTGGGAGAGATGCAGGCCCAGATGATGACCTTTGGAGGTGCCATGCCTGAAAAACTGATATGAAGATGCTCTCCCCCAAATAAGTGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR CCA 90 bp CTCAATAAGCACTCACTGAATGTCTACTCTGCCCCGAGACCTAAGTaGGACAATGGGGATGGTACTACAGGCTGTACTGTCTTGTCTGTT +
Preference number: 1 (lower is better)
Translates to: LNKHSLNVYSAPRPK*DNGDGTTGCTVLSV
Trigger: AACAGACAAGACAGTACAGCCTGTAGTACCATCCCCATTGTCCCACTTAGGTCTCGGGGCAGAGTAGACATTCAGTGAGTGCTTATTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR CCA 90 bp AGAGATTTGGCCAATCGGGCACATGAATCACTGAAAACAAGGCCGTaGACAGGAAAGACTAATACGGTCCGCTTTTCTGTTCTGCTAAGG +
Preference number: 1 (lower is better)
Translates to: RDLANRAHESLKTRP*TGKTNTVRFSVLLR
Trigger: CCTTAGCAGAACAGAAAAGCGGACCGTATTAGTCTTTCCTGTCCACGGCCTTGTTTTCAGTGATTCATGTGCCCGATTGGCCAAATCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000342272.3
3UTR GCA 90 bp CTCATCTGCAAAATGGGTGGACGAATACCTACACCATGGAGATACTaGGAAGAATGGAAAATAGCAGTGCATTTACCATCTGCTCACACC +
Preference number: 1 (lower is better)
Translates to: LICKMGGRIPTPWRY*EEWKIAVHLPSAHT
Trigger: GGTGTGAGCAGATGGTAAATGCACTGCTATTTTCCATTCTTCGCAGTATCTCCATGGTGTAGGTATTCGTCCACCCATTTTGCAGATGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR CCA 90 bp AAAATGGGTGGACGAATACCTACACCATGGAGATACTGCGAAGAATaGAAAATAGCAGTGCATTTACCATCTGCTCACACCATGCTGGGA +
Preference number: 1 (lower is better)
Translates to: KMGGRIPTPWRYCEE*KIAVHLPSAHTMLG
Trigger: TCCCAGCATGGTGTGAGCAGATGGTAAATGCACTGCTATTTTCCATTCTTCGCAGTATCTCCATGGTGTAGGTATTCGTCCACCCATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR CCA 90 bp CCAATAAAAACTCTGGACACTGAAGCACTGGTTAGCTTCCCTGGTTaGCCATACTTTGTCATACTGTTACTTATCAATGCTGGCAAGGTA +
Preference number: 1 (lower is better)
Translates to: PIKTLDTEALVSFPG*PYFVILLLINAGKV
Trigger: TACCTTGCCAGCATTGATAAGTAACAGTATGACAAAGTATGGCCAACCAGGGAAGCTAACCAGTGCTTCAGTGTCCAGAGTTTTTATTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR CCA 90 bp TTAAATTATGCTGATTCTACATTCGAAATGGAATCATGTCTGGCATaGATTCCATCTACACTGGCAGGACTCAAGGCAGAACTAAGCGAA +
Preference number: 1 (lower is better)
Translates to: LNYADSTFEMESCLA*IPSTLAGLKAELSE
Trigger: TTCGCTTAGTTCTGCCTTGAGTCCTGCCAGTGTAGATGGAATCCATGCCAGACATGATTCCATTTCGAATGTAGAATCAGCATAATTTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342272.3
3UTR TCA 90 bp GGAAATACGGGAATATATATTTTGGCATTTCCTATGTGCCAGGCATaGTGCTCAGTGCTTCATTGTCTTGTTTCATTGTCTCGACCATAT +
Preference number: 1 (lower is better)
Translates to: GNTGIYILAFPMCQA*CSVLHCLVSLSRPY
Trigger: ATATGGTCGAGACAATGAAACAAGACAATGAAGCACTGAGCATCATGCCTGGCACATAGGAAATGCCAAAATATATATTCCCGTATTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342272.3
3UTR-3UTR GCA 90 bp CCCCTGCAGGCTGCATGCAGCTGTCCAGCCTCCATGTGTGACTCCAGCTCTACCGGACAGGGGCACGTCTaGAGAGATTTGGCCAATCGG +
Preference number: 2 (lower is better)
Translates to: PLQAACSCPASMCDSSSTGQGHV*RDLANR
Trigger: CCGATTGGCCAAATCTCTGCAGACGTGCCCCTGTCC...GGTAGAGCTGGAGTCACACATGGAGGCTGGACAGCTGCATGCAGCCTGCAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000342272.3
3UTR CAA 90 bp CCTGGCTCTGAGTCTCCAAACCTGGGGCTCAGGAAGCCGCCTCCTTaGCACACCATCCAAAGTGAGTTCAATACAGCCACCCCTGCCCCC +
Preference number: 2 (lower is better)
Translates to: PGSESPNLGLRKPPP*HTIQSEFNTATPAP
Trigger: GGGGGCAGGGGTGGCTGTATTGAACTCACTTTGGATGGTGTGCAAAGGAGGCGGCTTCCTGAGCCCCAGGTTTGGAGACTCAGAGCCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR-3UTR GCA 90 bp AGCCAGGCTCCTGAGGACAGGGTGTGCCTGAACTCGAGCCTACTGTTGGTTGAGGACCCACAAGCACATTaGAGCCCAGCCAGAGCCCGT +
Preference number: 2 (lower is better)
Translates to: SQAPEDRVCLNSSLLLVEDPQAH*SPARAR
Trigger: ACGGGCTCTGGCTGGGCTGCAATGTGCTTGTGGGTC...CTCAACCAACAGTAGGCTCGAGTTCAGGCACACCCTGTCCTCAGGAGCCTGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR-3UTR CCA 90 bp GGCCCTGATGGGGGAGGAGACAAGCCATTTCACAGGGCATCACAGGAGATTTCTTGCCCCCTGGCCACCTaGTCAGTGGCTTCCCAGCCA +
Preference number: 2 (lower is better)
Translates to: GPDGGGDKPFHRASQEISCPLAT*SVASQP
Trigger: TGGCTGGGAAGCCACTGACCAGGTGGCCAGGGGGCA...AGAAATCTCCTGTGATGCCCTGTGAAATGGCTTGTCTCCTCCCCCATCAGGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR-3UTR GCA 90 bp TGCAGGCTGCATGCAGCTGTCCAGCCTCCATGTGTGACTCCAGCTCTACCCCATCTAGCACACCTGGGCTaGTCTGTGGATTCTGCCAGG +
Preference number: 2 (lower is better)
Translates to: CRLHAAVQPPCVTPALPHLAHLG*SVDSAR
Trigger: CCTGGCAGAATCCACAGAGCAGCCCAGGTGTGCTAG...ATGGGGTAGAGCTGGAGTCACACATGGAGGCTGGACAGCTGCATGCAGCCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342272.3
3UTR-3UTR GCA 90 bp AGCCAGGCTCCTGAGGACAGGGTGTGCCTGAACTCGAGCCTACTGTTGGTTGAGAGGCAAGGGAGGGAGTaGAGGGTGCAGACTGCACAA +
Preference number: 2 (lower is better)
Translates to: SQAPEDRVCLNSSLLLVERQGRE*RVQTAQ
Trigger: TTGTGCAGTCTGCACCCTGCACTCCCTCCCTTGCCT...CTCAACCAACAGTAGGCTCGAGTTCAGGCACACCCTGTCCTCAGGAGCCTGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR-3UTR CCA 90 bp CTAGCATCCCAAGCACACGGGAAACCCCAAATGCAATCCCAGTCTCAGACACACGGAAAGGCAAGGGAGTaGAGGAGAGCGGGGGACAGG +
Preference number: 2 (lower is better)
Translates to: LASQAHGKPQMQSQSQTHGKARE*RRAGDR
Trigger: CCTGTCCCCCGCTCTCCTCCACTCCCTTGCCTTTCC...GTGTGTCTGAGACTGGGATTGCATTTGGGGTTTCCCGTGTGCTTGGGATGCTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR CAA 90 bp GAATCCCAGAAGCCTGGCCTCGGACAGGGGCACGTCTGCAGAGATTaGGCCAATCGGGCACATGAATCACTGAAAACAAGGCCGTGGACA +
Preference number: 2 (lower is better)
Translates to: ESQKPGLGQGHVCRD*ANRAHESLKTRPWT
Trigger: TGTCCACGGCCTTGTTTTCAGTGATTCATGTGCCCGATTGGCCAAATCTCTGCAGACGTGCCCCTGTCCGAGGCCAGGCTTCTGGGATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000342272.3
3UTR CAA 90 bp GGGCTTATAACTGCACCCAGGCTGTACCCAGTTGGAGCCCCAGACTaGCCCCTCTCTTGCCGGGAAATGCTTCTTGACAAGCAGCTTGTC +
Preference number: 2 (lower is better)
Translates to: GLITAPRLYPVGAPD*PLSCREMLLDKQLV
Trigger: GACAAGCTGCTTGTCAAGAAGCATTTCCCGGCAAGAGAGGGGCAAGTCTGGGGCTCCAACTGGGTACAGCCTGGGTGCAGTTATAAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR-3UTR GCA 90 bp AGCCAGGCTCCTGAGGACAGGGTGTGCCTGAACTCGAGCCTACTGTTGGTTGAGGACTTGCCCCTCTCTTaGCGGGAAATGCTTCTTGAC +
Preference number: 2 (lower is better)
Translates to: SQAPEDRVCLNSSLLLVEDLPLS*REMLLD
Trigger: GTCAAGAAGCATTTCCCGGCAAGAGAGGGGCAAGTC...CTCAACCAACAGTAGGCTCGAGTTCAGGCACACCCTGTCCTCAGGAGCCTGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR-3UTR TCA 90 bp GAGAGAGTGAGGGAGTGGGAACTGGCCTCCATAGGCATAGTCAGAGTTTTGCACAACCCTACCTGGCTCTaGGTCTCCAAACCTGGGGCT +
Preference number: 2 (lower is better)
Translates to: ERVREWELASIGIVRVLHNPTWL*VSKPGA
Trigger: AGCCCCAGGTTTGGAGACTCAGAGCCAGGTAGGGTT...GTGCAAAACTCTGACTATGCCTATGGAGGCCAGTTCCCACTCCCTCACTCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR-3UTR GCA 90 bp GGCCCTGATGGGGGAGGAGACAAGCCATTTCACAGGGCATCACAGGAGATTTCTCACCCTGCCTGGCACTaGAAAAAGACGGGTCCTCAT +
Preference number: 2 (lower is better)
Translates to: GPDGGGDKPFHRASQEISHPAWH*KKTGPH
Trigger: ATGAGGACCCGTCTTTTTGCAGTGCCAGGCAGGGTG...AGAAATCTCCTGTGATGCCCTGTGAAATGGCTTGTCTCCTCCCCCATCAGGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR-3UTR GCA 90 bp GACCCATCAGACTTCCTAGAGCTGCCTGTGGTCAAGATTAGAAGAGGAGGCATCCAGACACACCCCATCTaGAGACCGGCCAACTGGGCT +
Preference number: 2 (lower is better)
Translates to: DPSDFLELPVVKIRRGGIQTHPI*RPANWA
Trigger: AGCCCAGTTGGCCGGTCTGCAGATGGGGTGTGTCTG...GATGCCTCCTCTTCTAATCTTGACCACAGGCAGCTCTAGGAAGTCTGATGGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR-3UTR CCA 90 bp CAACCCATCCCCACTCCCCAACCATACTGCCTCTTATGGCCACCATATCCATTTCTGAGTCTCCAAACCTaGGGCTCAGGAAGCCGCCTC +
Preference number: 2 (lower is better)
Translates to: QPIPTPQPYCLLWPPYPFLSLQT*GSGSRL
Trigger: GAGGCGGCTTCCTGAGCCCCAGGTTTGGAGACTCAG...AAATGGATATGGTGGCCATAAGAGGCAGTATGGTTGGGGAGTGGGGATGGGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR-3UTR TCA 90 bp CAACCCATCCCCACTCCCCAACCATACTGCCTCTTATGGCCACCATATCCATTTCAGACTGCAGCATCCTaGACCCCAAACCCAACCCCA +
Preference number: 2 (lower is better)
Translates to: QPIPTPQPYCLLWPPYPFQTAAS*TPNPTP
Trigger: TGGGGTTGGGTTTGGGGTTCAGGATGCTGCAGTCTG...AAATGGATATGGTGGCCATAAGAGGCAGTATGGTTGGGGAGTGGGGATGGGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR-3UTR TCA 90 bp GACCCATCAGACTTCCTAGAGCTGCCTGTGGTCAAGATTAGAAGAGGAGGCATCCCCAGCCAGAGCCCGTaGGCAGATGCGGGTTTATTA +
Preference number: 2 (lower is better)
Translates to: DPSDFLELPVVKIRRGGIPSQSP*ADAGLL
Trigger: TAATAAACCCGCATCTGCTCACGGGCTCTGGCTGGG...GATGCCTCCTCTTCTAATCTTGACCACAGGCAGCTCTAGGAAGTCTGATGGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR-3UTR GCA 90 bp GACCCATCAGACTTCCTAGAGCTGCCTGTGGTCAAGATTAGAAGAGGAGGCATCTTGGAGCCCCAGACTTaGCCCTCTCTTGCCGGGAAA +
Preference number: 2 (lower is better)
Translates to: DPSDFLELPVVKIRRGGILEPQT*PSLAGK
Trigger: TTTCCCGGCAAGAGAGGGGCAAGTCTGGGGCTCCAA...GATGCCTCCTCTTCTAATCTTGACCACAGGCAGCTCTAGGAAGTCTGATGGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR-3UTR CCA 90 bp CTGTGCTCTCCTGGGGTCTCCATAGAATGCCCAGAAGCTGCCAAGACAGCAGCTGGATTCCATCTACACTaGCAGGACTCAAGGCAGAAC +
Preference number: 2 (lower is better)
Translates to: LCSPGVSIECPEAAKTAAGFHLH*QDSRQN
Trigger: GTTCTGCCTTGAGTCCTGCCAGTGTAGATGGAATCC...AGCTGCTGTCTTGGCAGCTTCTGGGCATTCTATGGAGACCCCAGGAGAGCACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342272.3
3UTR-3UTR CCA 90 bp TGCAGGCTGCATGCAGCTGTCCAGCCTCCATGTGTGACTCCAGCTCTACCCCATTGCCTGGCTGTGAACTaGGACATGAGATTTCCAAGA +
Preference number: 2 (lower is better)
Translates to: CRLHAAVQPPCVTPALPHCLAVN*DMRFPR
Trigger: TCTTGGAAATCTCATGTCCCAGTTCACAGCCAGGCA...ATGGGGTAGAGCTGGAGTCACACATGGAGGCTGGACAGCTGCATGCAGCCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342272.3
3UTR-3UTR CCA 90 bp GAGAGAGTGAGGGAGTGGGAACTGGCCTCCATAGGCATAGTCAGAGTTTTGCACTTTGGCCACCCTGCCTaGCACTGCAAAAAGACGGGT +
Preference number: 2 (lower is better)
Translates to: ERVREWELASIGIVRVLHFGHPA*HCKKTG
Trigger: ACCCGTCTTTTTGCAGTGCCAGGCAGGGTGGCCAAA...GTGCAAAACTCTGACTATGCCTATGGAGGCCAGTTCCCACTCCCTCACTCTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR-3UTR CCA 90 bp GACCCATCAGACTTCCTAGAGCTGCCTGTGGTCAAGATTAGAAGAGGAGGCATCAGCAGCAGTTCCCTCTaGCTCAGCTTGGATGCCACG +
Preference number: 2 (lower is better)
Translates to: DPSDFLELPVVKIRRGGISSSSL*LSLDAT
Trigger: CGTGGCATCCAAGCTGAGCCAGAGGGAACTGCTGCT...GATGCCTCCTCTTCTAATCTTGACCACAGGCAGCTCTAGGAAGTCTGATGGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR-3UTR CCA 90 bp AGCCAGGCTCCTGAGGACAGGGTGTGCCTGAACTCGAGCCTACTGTTGGTTGAGACTGTAGAAGCTCTATaGTCTTTCAGCCCCCACTCA +
Preference number: 2 (lower is better)
Translates to: SQAPEDRVCLNSSLLLVETVEAL*SFSPHS
Trigger: TGAGTGGGGGCTGAAAGACCATAGAGCTTCTACAGT...CTCAACCAACAGTAGGCTCGAGTTCAGGCACACCCTGTCCTCAGGAGCCTGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR-3UTR CCA 90 bp AGAGTCCTGCAGAGACCTCAAGGCAGTGGGCCAGCATTGCTTTTAAGTTCATGCGCTAGCATTGGAGGCTaGGGGGACTCCACCTCAAAG +
Preference number: 2 (lower is better)
Translates to: RVLQRPQGSGPALLLSSCASIGG*GDSTSK
Trigger: CTTTGAGGTGGAGTCCCCCCAGCCTCCAATGCTAGC...GCATGAACTTAAAAGCAATGCTGGCCCACTGCCTTGAGGTCTCTGCAGGACTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR-3UTR TCA 90 bp AGAGTCCTGCAGAGACCTCAAGGCAGTGGGCCAGCATTGCTTTTAAGTTCATGCAACTTGCTGTGTGCGTaGCCTTGGGCAAGTCCCTCT +
Preference number: 2 (lower is better)
Translates to: RVLQRPQGSGPALLLSSCNLLCA*PWASPS
Trigger: AGAGGGACTTGCCCAAGGTCACGCACACAGCAAGTT...GCATGAACTTAAAAGCAATGCTGGCCCACTGCCTTGAGGTCTCTGCAGGACTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR-3UTR GCA 90 bp GACCCATCAGACTTCCTAGAGCTGCCTGTGGTCAAGATTAGAAGAGGAGGCATCGTGCAGGGTGCAGACTaGACAAGGACAGGTCTCTGT +
Preference number: 2 (lower is better)
Translates to: DPSDFLELPVVKIRRGGIVQGAD*TRTGLC
Trigger: ACAGAGACCTGTCCTTGTGCAGTCTGCACCCTGCAC...GATGCCTCCTCTTCTAATCTTGACCACAGGCAGCTCTAGGAAGTCTGATGGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR-3UTR GCA 90 bp CTAGCATCCCAAGCACACGGGAAACCCCAAATGCAATCCCAGTCTCAGACACACACAGGCCATCATCACTaGACCTTAACCCCTCTTCCC +
Preference number: 2 (lower is better)
Translates to: LASQAHGKPQMQSQSQTHTGHHH*TLTPLP
Trigger: GGGAAGAGGGGTTAAGGTGCAGTGATGATGGCCTGT...GTGTGTCTGAGACTGGGATTGCATTTGGGGTTTCCCGTGTGCTTGGGATGCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR-3UTR GCA 90 bp CAACCCATCCCCACTCCCCAACCATACTGCCTCTTATGGCCACCATATCCATTTCTGAAGCCCTTCAGCTaGCCCTCAAGGATCGTGAGA +
Preference number: 2 (lower is better)
Translates to: QPIPTPQPYCLLWPPYPFLKPFS*PSRIVR
Trigger: TCTCACGATCCTTGAGGGGCAGCTGAAGGGCTTCAG...AAATGGATATGGTGGCCATAAGAGGCAGTATGGTTGGGGAGTGGGGATGGGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR-3UTR GCA 90 bp AGAGTCCTGCAGAGACCTCAAGGCAGTGGGCCAGCATTGCTTTTAAGTTCATGCTTCCTGCCACCAACTTaGTGTGTGCGTGACCTTGGG +
Preference number: 2 (lower is better)
Translates to: RVLQRPQGSGPALLLSSCFLPPT*CVRDLG
Trigger: CCCAAGGTCACGCACACAGCAAGTTGGTGGCAGGAA...GCATGAACTTAAAAGCAATGCTGGCCCACTGCCTTGAGGTCTCTGCAGGACTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR-3UTR GCA 90 bp GACCCATCAGACTTCCTAGAGCTGCCTGTGGTCAAGATTAGAAGAGGAGGCATCTCACCCAGGCTGGAGTaGAGTGGCTTGATCTTGGCT +
Preference number: 2 (lower is better)
Translates to: DPSDFLELPVVKIRRGGISPRLE*SGLILA
Trigger: AGCCAAGATCAAGCCACTGCACTCCAGCCTGGGTGA...GATGCCTCCTCTTCTAATCTTGACCACAGGCAGCTCTAGGAAGTCTGATGGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR-3UTR CCA 90 bp GGGTCTGCTGTGCTCTCCTGGGGTCTCCATAGAATGCCCAGAAGCTGCCAAGACGAATCATGTCTGGCATaGATTCCATCTACACTGGCA +
Preference number: 2 (lower is better)
Translates to: GSAVLSWGLHRMPRSCQDESCLA*IPSTLA
Trigger: TGCCAGTGTAGATGGAATCCATGCCAGACATGATTC...GTCTTGGCAGCTTCTGGGCATTCTATGGAGACCCCAGGAGAGCACAGCAGACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342272.3
3UTR-3UTR CCA 90 bp CTGCTCTGTGGATTCTGCCAGGCACAGATCTGTGCCAGGCAACTCTCATCAGTTTTCTCTCCTACTCTGTaGCTTCAGCTCGGGAAGGGA +
Preference number: 2 (lower is better)
Translates to: LLCGFCQAQICARQLSSVFSPTL*LQLGKG
Trigger: TCCCTTCCCGAGCTGAAGCCACAGAGTAGGAGAGAA...AACTGATGAGAGTTGCCTGGCACAGATCTGTGCCTGGCAGAATCCACAGAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342272.3
3UTR-3UTR CCA 90 bp GACCCATCAGACTTCCTAGAGCTGCCTGTGGTCAAGATTAGAAGAGGAGGCATCCAGCCAGAGGATCCATaGGGTCTCCCCTCGTCTATT +
Preference number: 2 (lower is better)
Translates to: DPSDFLELPVVKIRRGGIQPEDP*GLPSSI
Trigger: AATAGACGAGGGGAGACCCCATGGATCCTCTGGCTG...GATGCCTCCTCTTCTAATCTTGACCACAGGCAGCTCTAGGAAGTCTGATGGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR-3UTR CCA 90 bp GACCCATCAGACTTCCTAGAGCTGCCTGTGGTCAAGATTAGAAGAGGAGGCATCAGCGAAGAAAGTGGCTaGGCTAGCATTGGAGGCTGG +
Preference number: 2 (lower is better)
Translates to: DPSDFLELPVVKIRRGGISEESG*ASIGGW
Trigger: CCAGCCTCCAATGCTAGCCCAGCCACTTTCTTCGCT...GATGCCTCCTCTTCTAATCTTGACCACAGGCAGCTCTAGGAAGTCTGATGGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR-3UTR CCA 90 bp GACCCATCAGACTTCCTAGAGCTGCCTGTGGTCAAGATTAGAAGAGGAGGCATCTCCCTTTGGGGTCCCTaGGATCCTCTACCAAAACGC +
Preference number: 2 (lower is better)
Translates to: DPSDFLELPVVKIRRGGISLWGP*DPLPKR
Trigger: GCGTTTTGGTAGAGGATCCCAGGGACCCCAAAGGGA...GATGCCTCCTCTTCTAATCTTGACCACAGGCAGCTCTAGGAAGTCTGATGGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR-3UTR CCA 90 bp GAGAGAGTGAGGGAGTGGGAACTGGCCTCCATAGGCATAGTCAGAGTTTTGCACAATGCATTCCGGGCATaGCAGGAGACCCATCAGACT +
Preference number: 2 (lower is better)
Translates to: ERVREWELASIGIVRVLHNAFRA*QETHQT
Trigger: AGTCTGATGGGTCTCCTGCCATGCCCGGAATGCATT...GTGCAAAACTCTGACTATGCCTATGGAGGCCAGTTCCCACTCCCTCACTCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR CAA 90 bp GCTCTACAAGCAATCCTTGCTCTGGAGCTCCCACTGGGTTGGACTTaGTCAGGCCTGCATCAAGTTAGACTTCTTCCTCTGCCCTGTTCT +
Preference number: 2 (lower is better)
Translates to: ALQAILALELPLGWT*SGLHQVRLLPLPCS
Trigger: AGAACAGGGCAGAGGAAGAAGTCTAACTTGATGCAGGCCTGACAAAGTCCAACCCAGTGGGAGCTCCAGAGCAAGGATTGCTTGTAGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR-3UTR TCA 90 bp CAACCCATCCCCACTCCCCAACCATACTGCCTCTTATGGCCACCATATCCATTTCCAGCAACCATGTTCTaGACCACACAGCTGTTCTGC +
Preference number: 2 (lower is better)
Translates to: QPIPTPQPYCLLWPPYPFPATMF*TTQLFC
Trigger: GCAGAACAGCTGTGTGGTTCAGAACATGGTTGCTGG...AAATGGATATGGTGGCCATAAGAGGCAGTATGGTTGGGGAGTGGGGATGGGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR-3UTR GCA 90 bp GGGACAATGGGGATGGTACTACAGGCTGTACTGTCTTGTCTGTTTACCAAAACCGCCCTGGAAGAGTCCTaGAGAGACCTCAAGGCAGTG +
Preference number: 2 (lower is better)
Translates to: GTMGMVLQAVLSCLFTKTALEES*RDLKAV
Trigger: CACTGCCTTGAGGTCTCTGCAGGACTCTTCCAGGGC...GGTTTTGGTAAACAGACAAGACAGTACAGCCTGTAGTACCATCCCCATTGTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR-3UTR CCA 90 bp ATTCCTAAAAAGTCAAGAGAACTGCTTTCCTGCCACCAACTTGCTGTGTGCGTGGGGGTGAATGTGAACTaGACCACGGGGCTCCAGGTC +
Preference number: 2 (lower is better)
Translates to: IPKKSRELLSCHQLAVCVGVNVN*TTGLQV
Trigger: GACCTGGAGCCCCGTGGTCCAGTTCACATTCACCCC...CACGCACACAGCAAGTTGGTGGCAGGAAAGCAGTTCTCTTGACTTTTTAGGAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR-3UTR CCA 90 bp CCAATCAGTGATGGCATCTTCCACATACAGCAAAGAAGTGATATAGCCAGGATTTGCAGACCGGCCAACTaGGCTGGCTGCCCACCTGCT +
Preference number: 2 (lower is better)
Translates to: PISDGIFHIQQRSDIARICRPAN*AGCPPA
Trigger: AGCAGGTGGGCAGCCAGCCCAGTTGGCCGGTCTGCA...AATCCTGGCTATATCACTTCTTTGCTGTATGTGGAAGATGCCATCACTGATTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR-3UTR TCA 90 bp TCATCAGTTCCCTTTAAGCAGGGAGTGAAAGTTACACGGGAGGGAGGTGTGCCACCTATGTGCCAGGCATaGTGCTCAGTGCTTCATTGT +
Preference number: 2 (lower is better)
Translates to: SSVPFKQGVKVTREGGVPPMCQA*CSVLHC
Trigger: ACAATGAAGCACTGAGCATCATGCCTGGCACATAGG...TGGCACACCTCCCTCCCGTGTAACTTTCACTCCCTGCTTAAAGGGAACTGATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342272.3
3UTR-3UTR GCA 90 bp GCACATGAATCACTGAAAACAAGGCCGTGGACAGGAAAGACTAATACGGTCCGCGGGGTCTCCATAGAATaGCCAGAAGCTGCCAAGACA +
Preference number: 2 (lower is better)
Translates to: AHESLKTRPWTGKTNTVRGVSIE*PEAAKT
Trigger: TGTCTTGGCAGCTTCTGGGCATTCTATGGAGACCCC...GCGGACCGTATTAGTCTTTCCTGTCCACGGCCTTGTTTTCAGTGATTCATGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000342272.3
3UTR-3UTR GCA 90 bp AGAGTCCTGCAGAGACCTCAAGGCAGTGGGCCAGCATTGCTTTTAAGTTCATGCACGGGAAACCCCAAATaGAATCCCAGTCTCAGACAC +
Preference number: 2 (lower is better)
Translates to: RVLQRPQGSGPALLLSSCTGNPK*NPSLRH
Trigger: GTGTCTGAGACTGGGATTGCATTTGGGGTTTCCCGT...GCATGAACTTAAAAGCAATGCTGGCCCACTGCCTTGAGGTCTCTGCAGGACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR-3UTR CCA 90 bp CCAAGCCCATCCTTCCTGGAATCCCAGCATCATTCCAGAGTTTTGAAAACTTTTTTGGCCTGGGAGCTTTaGCAGGCACAGGCTTGTCCC +
Preference number: 2 (lower is better)
Translates to: PSPSFLESQHHSRVLKTFLAWEL*QAQACP
Trigger: GGGACAAGCCTGTGCCTGCCAAAGCTCCCAGGCCAA...AAAAGTTTTCAAAACTCTGGAATGATGCTGGGATTCCAGGAAGGATGGGCTTGG
51% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR-3UTR CCA 90 bp CCAATCAGTGATGGCATCTTCCACATACAGCAAAGAAGTGATATAGCCAGGATTCTCCAACCCCCTCGCTaGGAACCACCGGCTGTGAGA +
Preference number: 2 (lower is better)
Translates to: PISDGIFHIQQRSDIARILQPPR*EPPAVR
Trigger: TCTCACAGCCGGTGGTTCCCAGCGAGGGGGTTGGAG...AATCCTGGCTATATCACTTCTTTGCTGTATGTGGAAGATGCCATCACTGATTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR CAA 90 bp CTCTGGGTTTCAGTCCCAGCTCTGTCCTTCCCTCTCTGTGATACCTaGAACCAATCACTCCATCTCCCCAAGGCTCAATTTTCCTCATCT +
Preference number: 2 (lower is better)
Translates to: LWVSVPALSFPLCDT*NQSLHLPKAQFSSS
Trigger: AGATGAGGAAAATTGAGCCTTGGGGAGATGGAGTGATTGGTTCAAGGTATCACAGAGAGGGAAGGACAGAGCTGGGACTGAAACCCAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR CAA 90 bp TGGACAAAATATGACTCCCCGCTCAGTCCAGGCTCTGTCACTGACTaGCTGTGTGATCCTTACAAATCACGACACTCTCTCCAGACCTGT +
Preference number: 2 (lower is better)
Translates to: WTKYDSPLSPGSVTD*LCDPYKSRHSLQTC
Trigger: ACAGGTCTGGAGAGAGTGTCGTGATTTGTAAGGATCACACAGCAAGTCAGTGACAGAGCCTGGACTGAGCGGGGAGTCATATTTTGTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR-3UTR TCA 90 bp TCTTTAAGTGAGGTACATCCAAGTAGCCATCTTCTACCAAGTAAGCCAAAGGGGCCGTGGGAGGCCTCCTaGAACTCTTGTGGGGTGAAT +
Preference number: 2 (lower is better)
Translates to: SLSEVHPSSHLLPSKPKGPWEAS*NSCGVN
Trigger: ATTCACCCCACAAGAGTTTCAGGAGGCCTCCCACGG...CCCCTTTGGCTTACTTGGTAGAAGATGGCTACTTGGATGTACCTCACTTAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR-3UTR TCA 90 bp GGGACAATGGGGATGGTACTACAGGCTGTACTGTCTTGTCTGTTTACCAAAACCGAGCCTACTGTTGGTTaGGGGACCTTCTTCTCCAAC +
Preference number: 2 (lower is better)
Translates to: GTMGMVLQAVLSCLFTKTEPTVG*GTFFSN
Trigger: GTTGGAGAAGAAGGTCCCTCAACCAACAGTAGGCTC...GGTTTTGGTAAACAGACAAGACAGTACAGCCTGTAGTACCATCCCCATTGTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR-3UTR GCA 90 bp CAACCCATCCCCACTCCCCAACCATACTGCCTCTTATGGCCACCATATCCATTTCAGCCTCCTCTAACGTaGTGGAATTATAGGTGTGAG +
Preference number: 2 (lower is better)
Translates to: QPIPTPQPYCLLWPPYPFQPPLT*WNYRCE
Trigger: CTCACACCTATAATTCCAGCACGTTAGAGGAGGCTG...AAATGGATATGGTGGCCATAAGAGGCAGTATGGTTGGGGAGTGGGGATGGGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR-3UTR GCA 90 bp GGGACAATGGGGATGGTACTACAGGCTGTACTGTCTTGTCTGTTTACCAAAACCACCACACAGCTGTTCTaGCACCACATACAGGAGGTG +
Preference number: 2 (lower is better)
Translates to: GTMGMVLQAVLSCLFTKTTTQLF*HHIQEV
Trigger: CACCTCCTGTATGTGGTGGCAGAACAGCTGTGTGGT...GGTTTTGGTAAACAGACAAGACAGTACAGCCTGTAGTACCATCCCCATTGTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR-3UTR CCA 90 bp CCAATCAGTGATGGCATCTTCCACATACAGCAAAGAAGTGATATAGCCAGGATTGAGTCCAGTCCTCTTTaGCCACCCTGCCTGGCACTG +
Preference number: 2 (lower is better)
Translates to: PISDGIFHIQQRSDIARIESSPL*PPCLAL
Trigger: CAGTGCCAGGCAGGGTGGCCAAAGAGGACTGGACTC...AATCCTGGCTATATCACTTCTTTGCTGTATGTGGAAGATGCCATCACTGATTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR-3UTR CCA 90 bp CAACCCATCCCCACTCCCCAACCATACTGCCTCTTATGGCCACCATATCCATTTCTCCTGAAACTCTTGTaGGGTGAATGTGAACTGGAC +
Preference number: 2 (lower is better)
Translates to: QPIPTPQPYCLLWPPYPFLLKLL*GECELD
Trigger: GTCCAGTTCACATTCACCCCACAAGAGTTTCAGGAG...AAATGGATATGGTGGCCATAAGAGGCAGTATGGTTGGGGAGTGGGGATGGGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR-3UTR CCA 90 bp ATTCCTAAAAAGTCAAGAGAACTGCTTTCCTGCCACCAACTTGCTGTGTGCGTGACATTCCATTCCTCTTaGCACCACCACCGCCACCCA +
Preference number: 2 (lower is better)
Translates to: IPKKSRELLSCHQLAVCVTFHSS*HHHRHP
Trigger: TGGGTGGCGGTGGTGGTGCCAAGAGGAATGGAATGT...CACGCACACAGCAAGTTGGTGGCAGGAAAGCAGTTCTCTTGACTTTTTAGGAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR-3UTR CCA 90 bp ATTCCTAAAAAGTCAAGAGAACTGCTTTCCTGCCACCAACTTGCTGTGTGCGTGTCACCTCCATCCCTTTaGGGTCCCTGGGATCCTCTA +
Preference number: 2 (lower is better)
Translates to: IPKKSRELLSCHQLAVCVSPPSL*GPWDPL
Trigger: TAGAGGATCCCAGGGACCCCAAAGGGATGGAGGTGA...CACGCACACAGCAAGTTGGTGGCAGGAAAGCAGTTCTCTTGACTTTTTAGGAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR-3UTR CCA 90 bp AGCCAGGCTCCTGAGGACAGGGTGTGCCTGAACTCGAGCCTACTGTTGGTTGAGGTGAGAGTAACTTCATaGGCAGTACTTATTCCTAAA +
Preference number: 2 (lower is better)
Translates to: SQAPEDRVCLNSSLLLVEVRVTS*AVLIPK
Trigger: TTTAGGAATAAGTACTGCCCATGAAGTTACTCTCAC...CTCAACCAACAGTAGGCTCGAGTTCAGGCACACCCTGTCCTCAGGAGCCTGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR-3UTR CCA 90 bp CAACCCATCCCCACTCCCCAACCATACTGCCTCTTATGGCCACCATATCCATTTCTAGTGGAGAAGCTGTaGATAGGAAGAGATACAGGG +
Preference number: 2 (lower is better)
Translates to: QPIPTPQPYCLLWPPYPFLVEKL*IGRDTG
Trigger: CCCTGTATCTCTTCCTATCCACAGCTTCTCCACTAG...AAATGGATATGGTGGCCATAAGAGGCAGTATGGTTGGGGAGTGGGGATGGGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR CAA 90 bp GTGGGAGGAGACAGAGCACTGTGTTCTGGGATATTCAAACTGACCTaGTCCATTTCCTCTACTGTCATCCAGAACATCTACAGGCAAGGG +
Preference number: 2 (lower is better)
Translates to: VGGDRALCSGIFKLT*SISSTVIQNIYRQG
Trigger: CCCTTGCCTGTAGATGTTCTGGATGACAGTAGAGGAAATGGACAAGGTCAGTTTGAATATCCCAGAACACAGTGCTCTGTCTCCTCCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR CAA 90 bp TGCCCTGGAAGAGTCCTGCAGAGACCTCAAGGCAGTGGGCCAGCATaGCTTTTAAGTTCATGCATGGTACAAACCACCTTAAATGCATTC +
Preference number: 2 (lower is better)
Translates to: CPGRVLQRPQGSGPA*LLSSCMVQTTLNAF
Trigger: GAATGCATTTAAGGTGGTTTGTACCATGCATGAACTTAAAAGCAATGCTGGCCCACTGCCTTGAGGTCTCTGCAGGACTCTTCCAGGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR-3UTR TCA 90 bp ATTCCATCTACACTGGCAGGACTCAAGGCAGAACTAAGCGAATCAAAGTCTTGTTCCTCCCGAAGACAGTaGCAGCTATGGTTCAGGCCA +
Preference number: 2 (lower is better)
Translates to: IPSTLAGLKAELSESKSCSSRRQ*QLWFRP
Trigger: TGGCCTGAACCATAGCTGTCACTGTCTTCGGGAGGA...ACAAGACTTTGATTCGCTTAGTTCTGCCTTGAGTCCTGCCAGTGTAGATGGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342272.3
3UTR-3UTR TCA 90 bp GAGAGAGTGAGGGAGTGGGAACTGGCCTCCATAGGCATAGTCAGAGTTTTGCACCTGGGATATTCAAACTaGCCTTGTCCATTTCCTCTA +
Preference number: 2 (lower is better)
Translates to: ERVREWELASIGIVRVLHLGYSN*PCPFPL
Trigger: TAGAGGAAATGGACAAGGTCAGTTTGAATATCCCAG...GTGCAAAACTCTGACTATGCCTATGGAGGCCAGTTCCCACTCCCTCACTCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR-3UTR TCA 90 bp GGGACAATGGGGATGGTACTACAGGCTGTACTGTCTTGTCTGTTTACCAAAACCAAACAGGGGGCCAGATaGGCTGATATCTTAGAGTGC +
Preference number: 2 (lower is better)
Translates to: GTMGMVLQAVLSCLFTKTKQGAR*ADILEC
Trigger: GCACTCTAAGATATCAGCTCATCTGGCCCCCTGTTT...GGTTTTGGTAAACAGACAAGACAGTACAGCCTGTAGTACCATCCCCATTGTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR-3UTR GCA 90 bp ATTCCTAAAAAGTCAAGAGAACTGCTTTCCTGCCACCAACTTGCTGTGTGCGTGCTTGAGAAGCTCAGATaGAGATGCAGAGCTGTGGGC +
Preference number: 2 (lower is better)
Translates to: IPKKSRELLSCHQLAVCVLEKLR*RCRAVG
Trigger: GCCCACAGCTCTGCATCTGCATCTGAGCTTCTCAAG...CACGCACACAGCAAGTTGGTGGCAGGAAAGCAGTTCTCTTGACTTTTTAGGAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR-3UTR GCA 90 bp CCAAGCCCATCCTTCCTGGAATCCCAGCATCATTCCAGAGTTTTGAAAACTTTTGCCCCATTCCCCTCATaGTCCAGGAGTCTTGAGAAG +
Preference number: 2 (lower is better)
Translates to: PSPSFLESQHHSRVLKTFAPFPS*SRSLEK
Trigger: CTTCTCAAGACTCCTGGAGCATGAGGGGAATGGGGC...AAAAGTTTTCAAAACTCTGGAATGATGCTGGGATTCCAGGAAGGATGGGCTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR-3UTR CCA 90 bp CCAATCAGTGATGGCATCTTCCACATACAGCAAAGAAGTGATATAGCCAGGATTGGAAACCATAGCCTTTaGCCCTCACCCCACCCACAG +
Preference number: 2 (lower is better)
Translates to: PISDGIFHIQQRSDIARIGNHSL*PSPHPQ
Trigger: CTGTGGGTGGGGTGAGGGCCAAAGGCTATGGTTTCC...AATCCTGGCTATATCACTTCTTTGCTGTATGTGGAAGATGCCATCACTGATTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR-3UTR CCA 90 bp CAACCCATCCCCACTCCCCAACCATACTGCCTCTTATGGCCACCATATCCATTTCAGCCAGGTCTTCTGTaGGTCCATCAGATTATGAAA +
Preference number: 2 (lower is better)
Translates to: QPIPTPQPYCLLWPPYPFQPGLL*VHQIMK
Trigger: TTTCATAATCTGATGGACCCACAGAAGACCTGGCTG...AAATGGATATGGTGGCCATAAGAGGCAGTATGGTTGGGGAGTGGGGATGGGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR-3UTR CCA 90 bp GGGACAATGGGGATGGTACTACAGGCTGTACTGTCTTGTCTGTTTACCAAAACCTGTAATGTAGGCACCTaGTCAAGACAGCCTGGAGTG +
Preference number: 2 (lower is better)
Translates to: GTMGMVLQAVLSCLFTKTCNVGT*SRQPGV
Trigger: CACTCCAGGCTGTCTTGACCAGGTGCCTACATTACA...GGTTTTGGTAAACAGACAAGACAGTACAGCCTGTAGTACCATCCCCATTGTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR-3UTR TCA 90 bp GGGACAATGGGGATGGTACTACAGGCTGTACTGTCTTGTCTGTTTACCAAAACCCCGGGAAATGCTTCTTaGCAAGCAGCTTGTCTTCAA +
Preference number: 2 (lower is better)
Translates to: GTMGMVLQAVLSCLFTKTPGNAS*QAACLQ
Trigger: TTGAAGACAAGCTGCTTGTCAAGAAGCATTTCCCGG...GGTTTTGGTAAACAGACAAGACAGTACAGCCTGTAGTACCATCCCCATTGTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR-3UTR GCA 90 bp CAACCCATCCCCACTCCCCAACCATACTGCCTCTTATGGCCACCATATCCATTTAAAAGTCAAGAGAACTaGTTTCCTGCCACCAACTTG +
Preference number: 2 (lower is better)
Translates to: QPIPTPQPYCLLWPPYPFKSQEN*FPATNL
Trigger: CAAGTTGGTGGCAGGAAAGCAGTTCTCTTGACTTTT...AAATGGATATGGTGGCCATAAGAGGCAGTATGGTTGGGGAGTGGGGATGGGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR-3UTR CCA 90 bp CCAATCAGTGATGGCATCTTCCACATACAGCAAAGAAGTGATATAGCCAGGATTGACAGGTCTCTGTGCTaGTCTGAGGGGGTCTCAACA +
Preference number: 2 (lower is better)
Translates to: PISDGIFHIQQRSDIARIDRSLC*SEGVST
Trigger: TGTTGAGACCCCCTCAGACCAGCACAGAGACCTGTC...AATCCTGGCTATATCACTTCTTTGCTGTATGTGGAAGATGCCATCACTGATTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR-3UTR CCA 90 bp CCAAGCCCATCCTTCCTGGAATCCCAGCATCATTCCAGAGTTTTGAAAACTTTTAGAAGGGAAGCTAACTaGACTGGTGGGAGGAGACAG +
Preference number: 2 (lower is better)
Translates to: PSPSFLESQHHSRVLKTFRREAN*TGGRRQ
Trigger: CTGTCTCCTCCCACCAGTCCAGTTAGCTTCCCTTCT...AAAAGTTTTCAAAACTCTGGAATGATGCTGGGATTCCAGGAAGGATGGGCTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR-3UTR CCA 90 bp GGGACAATGGGGATGGTACTACAGGCTGTACTGTCTTGTCTGTTTACCAAAACCCTCACTCTTTCATGGTaGGAGCAGTGTGGTTCTGTA +
Preference number: 2 (lower is better)
Translates to: GTMGMVLQAVLSCLFTKTLTLSW*EQCGSV
Trigger: TACAGAACCACACTGCTCCCACCATGAAAGAGTGAG...GGTTTTGGTAAACAGACAAGACAGTACAGCCTGTAGTACCATCCCCATTGTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR CAA 90 bp CCTCTTTATCACCATAATCTATCTCATTTGAGCCTCACAACTGCATaGCCTATGAGGAAGACCATGGGGCAGGGATTAGAGTCTCCTCAG +
Preference number: 2 (lower is better)
Translates to: PLYHHNLSHLSLTTA*PMRKTMGQGLESPQ
Trigger: CTGAGGAGACTCTAATCCCTGCCCCATGGTCTTCCTCATAGGCAATGCAGTTGTGAGGCTCAAATGAGATAGATTATGGTGATAAAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR-3UTR TCA 90 bp GGGACAATGGGGATGGTACTACAGGCTGTACTGTCTTGTCTGTTTACCAAAACCAAAAACCTGGGTCCCTaGATCATTATGATGAGGGAC +
Preference number: 2 (lower is better)
Translates to: GTMGMVLQAVLSCLFTKTKNLGP*IIMMRD
Trigger: GTCCCTCATCATAATGATTCAGGGACCCAGGTTTTT...GGTTTTGGTAAACAGACAAGACAGTACAGCCTGTAGTACCATCCCCATTGTCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR-3UTR GCA 90 bp TCATCAGTTCCCTTTAAGCAGGGAGTGAAAGTTACACGGGAGGGAGGTGTGCCAAGGCATGATGCTCAGTaGTTCATTGTCTTGTTTCAT +
Preference number: 2 (lower is better)
Translates to: SSVPFKQGVKVTREGGVPRHDAQ*FIVLFH
Trigger: ATGAAACAAGACAATGAAGCACTGAGCATCATGCCT...TGGCACACCTCCCTCCCGTGTAACTTTCACTCCCTGCTTAAAGGGAACTGATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342272.3
3UTR-3UTR GCA 90 bp CCAAGCCCATCCTTCCTGGAATCCCAGCATCATTCCAGAGTTTTGAAAACTTTTAAAGGGGCTTATAACTaGACCCAGGCTGTACCCAGT +
Preference number: 2 (lower is better)
Translates to: PSPSFLESQHHSRVLKTFKGAYN*TQAVPS
Trigger: ACTGGGTACAGCCTGGGTGCAGTTATAAGCCCCTTT...AAAAGTTTTCAAAACTCTGGAATGATGCTGGGATTCCAGGAAGGATGGGCTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR-3UTR GCA 90 bp GGGACAATGGGGATGGTACTACAGGCTGTACTGTCTTGTCTGTTTACCAAAACCTTTGAGCCTCACAACTaGATTGCCTATGAGGAAGAC +
Preference number: 2 (lower is better)
Translates to: GTMGMVLQAVLSCLFTKTFEPHN*IAYEED
Trigger: GTCTTCCTCATAGGCAATGCAGTTGTGAGGCTCAAA...GGTTTTGGTAAACAGACAAGACAGTACAGCCTGTAGTACCATCCCCATTGTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR-3UTR GCA 90 bp CCAATCAGTGATGGCATCTTCCACATACAGCAAAGAAGTGATATAGCCAGGATTGGAAGCCGCCTCCTTTaGACACCATCCAAAGTGAGT +
Preference number: 2 (lower is better)
Translates to: PISDGIFHIQQRSDIARIGSRLL*TPSKVS
Trigger: ACTCACTTTGGATGGTGTGCAAAGGAGGCGGCTTCC...AATCCTGGCTATATCACTTCTTTGCTGTATGTGGAAGATGCCATCACTGATTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR-3UTR CCA 90 bp CAACCCATCCCCACTCCCCAACCATACTGCCTCTTATGGCCACCATATCCATTTCCCAGAGACCTAGTGTaGTACAAAACATCTTTAAGT +
Preference number: 2 (lower is better)
Translates to: QPIPTPQPYCLLWPPYPFPRDLV*YKTSLS
Trigger: ACTTAAAGATGTTTTGTACCACACTAGGTCTCTGGG...AAATGGATATGGTGGCCATAAGAGGCAGTATGGTTGGGGAGTGGGGATGGGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR-3UTR GCA 90 bp GGGACAATGGGGATGGTACTACAGGCTGTACTGTCTTGTCTGTTTACCAAAACCTATTATTGCACAGACTaGAGCATCCTGAACCCCAAA +
Preference number: 2 (lower is better)
Translates to: GTMGMVLQAVLSCLFTKTYYCTD*SILNPK
Trigger: TTTGGGGTTCAGGATGCTGCAGTCTGTGCAATAATA...GGTTTTGGTAAACAGACAAGACAGTACAGCCTGTAGTACCATCCCCATTGTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR-3UTR GCA 90 bp ATTCCTAAAAAGTCAAGAGAACTGCTTTCCTGCCACCAACTTGCTGTGTGCGTGATGCGGGTTTATTATTaGACAGACTGCAGCATCCTG +
Preference number: 2 (lower is better)
Translates to: IPKKSRELLSCHQLAVCVMRVYY*TDCSIL
Trigger: CAGGATGCTGCAGTCTGTGCAATAATAAACCCGCAT...CACGCACACAGCAAGTTGGTGGCAGGAAAGCAGTTCTCTTGACTTTTTAGGAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR-3UTR GCA 90 bp CAACCCATCCCCACTCCCCAACCATACTGCCTCTTATGGCCACCATATCCATTTTCAATTTTCCTCATCTaGAAAATGGGTGGACGAATA +
Preference number: 2 (lower is better)
Translates to: QPIPTPQPYCLLWPPYPFSIFLI*KMGGRI
Trigger: TATTCGTCCACCCATTTTGCAGATGAGGAAAATTGA...AAATGGATATGGTGGCCATAAGAGGCAGTATGGTTGGGGAGTGGGGATGGGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR-3UTR CCA 90 bp GGGACAATGGGGATGGTACTACAGGCTGTACTGTCTTGTCTGTTTACCAAAACCGCTTATAGTGAGTGCTaGCCATGCCAGAAAAATCAA +
Preference number: 2 (lower is better)
Translates to: GTMGMVLQAVLSCLFTKTAYSEC*PCQKNQ
Trigger: TTGATTTTTCTGGCATGGCCAGCACTCACTATAAGC...GGTTTTGGTAAACAGACAAGACAGTACAGCCTGTAGTACCATCCCCATTGTCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR CAA 90 bp CAGAAAAGTAAGAAAGTTCTAGATGTTAAGGGACAGAGCCAAGATTaGAACCAGCAACCATGTTCTGAACCACACAGCTGTTCTGCCACC +
Preference number: 2 (lower is better)
Translates to: QKSKKVLDVKGQSQD*NQQPCSEPHSCSAT
Trigger: GGTGGCAGAACAGCTGTGTGGTTCAGAACATGGTTGCTGGTTCAAATCTTGGCTCTGTCCCTTAACATCTAGAACTTTCTTACTTTTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR CAA 90 bp TTAGCATTTGGAACCCTCCCAGATTCCTTCCTATGTCCCTTTCCCTaGGCTGGTTCTGATTCGCATTCTTTGCTTGTAATCAATGTGACT +
Preference number: 2 (lower is better)
Translates to: LAFGTLPDSFLCPFP*AGSDSHSLLVINVT
Trigger: AGTCACATTGATTACAAGCAAAGAATGCGAATCAGAACCAGCCAAGGGAAAGGGACATAGGAAGGAATCTGGGAGGGTTCCAAATGCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR-3UTR TCA 90 bp TTTGTCCTCAAATATCCTCCCGAAGACAGTGACAGCTATGGTTCAGGCCATCCTTCACCCTTTGGAATGTaGAGGAAATACGGGAATATA +
Preference number: 2 (lower is better)
Translates to: FVLKYPPEDSDSYGSGHPSPFGM*RKYGNI
Trigger: TATATTCCCGTATTTCCTTCACATTCCAAAGGGTGA...AGGATGGCCTGAACCATAGCTGTCACTGTCTTCGGGAGGATATTTGAGGACAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342272.3
3UTR-3UTR TCA 90 bp CCAAGCCCATCCTTCCTGGAATCCCAGCATCATTCCAGAGTTTTGAAAACTTTTAATGTCCTGGTTAGGTaGCATCTCCCAAAACACACA +
Preference number: 2 (lower is better)
Translates to: PSPSFLESQHHSRVLKTFNVLVR*HLPKHT
Trigger: TGTGTGTTTTGGGAGATGTCACCTAACCAGGACATT...AAAAGTTTTCAAAACTCTGGAATGATGCTGGGATTCCAGGAAGGATGGGCTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR-3UTR TCA 90 bp TCTTTAAGTGAGGTACATCCAAGTAGCCATCTTCTACCAAGTAAGCCAAAGGGGGAAGGGGGATGGGATTaGATATCAATGTCCTGGTTA +
Preference number: 2 (lower is better)
Translates to: SLSEVHPSSHLLPSKPKGEGGWD*ISMSWL
Trigger: TAACCAGGACATTGATATTCAATCCCATCCCCCTTC...CCCCTTTGGCTTACTTGGTAGAAGATGGCTACTTGGATGTACCTCACTTAAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR-3UTR TCA 90 bp CCAATCAGTGATGGCATCTTCCACATACAGCAAAGAAGTGATATAGCCAGGATTAAGGTTCCCAAGCATTaGAGGGAAATGGGAAAGCTG +
Preference number: 2 (lower is better)
Translates to: PISDGIFHIQQRSDIARIKVPKH*REMGKL
Trigger: CAGCTTTCCCATTTCCCTTCAATGCTTGGGAACCTT...AATCCTGGCTATATCACTTCTTTGCTGTATGTGGAAGATGCCATCACTGATTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR-3UTR TCA 90 bp CCAATCAGTGATGGCATCTTCCACATACAGCAAAGAAGTGATATAGCCAGGATTGTCCTTCCCTCTCTGTaGTACCTTGAACCAATCACT +
Preference number: 2 (lower is better)
Translates to: PISDGIFHIQQRSDIARIVLPSL*YLEPIT
Trigger: AGTGATTGGTTCAAGGTATCACAGAGAGGGAAGGAC...AATCCTGGCTATATCACTTCTTTGCTGTATGTGGAAGATGCCATCACTGATTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR-3UTR GCA 90 bp CCAATCAGTGATGGCATCTTCCACATACAGCAAAGAAGTGATATAGCCAGGATTTCTCTTGCCGGGAAATaGTTCTTGACAAGCAGCTTG +
Preference number: 2 (lower is better)
Translates to: PISDGIFHIQQRSDIARISLAGK*FLTSSL
Trigger: CAAGCTGCTTGTCAAGAAGCATTTCCCGGCAAGAGA...AATCCTGGCTATATCACTTCTTTGCTGTATGTGGAAGATGCCATCACTGATTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR-3UTR CCA 90 bp GGGACAATGGGGATGGTACTACAGGCTGTACTGTCTTGTCTGTTTACCAAAACCTCTTTCCTTTTCCTTTaGCAGATGCAGAGACCAAAA +
Preference number: 2 (lower is better)
Translates to: GTMGMVLQAVLSCLFTKTSFLFL*QMQRPK
Trigger: TTTTGGTCTCTGCATCTGCCAAAGGAAAAGGAAAGA...GGTTTTGGTAAACAGACAAGACAGTACAGCCTGTAGTACCATCCCCATTGTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR-3UTR CCA 90 bp CCAAGCCCATCCTTCCTGGAATCCCAGCATCATTCCAGAGTTTTGAAAACTTTTATGAAAATACAGTCCTaGATTCCAGCCAAGCCACAA +
Preference number: 2 (lower is better)
Translates to: PSPSFLESQHHSRVLKTFMKIQS*IPAKPQ
Trigger: TTGTGGCTTGGCTGGAATCCAGGACTGTATTTTCAT...AAAAGTTTTCAAAACTCTGGAATGATGCTGGGATTCCAGGAAGGATGGGCTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR CAA 90 bp GGGGAGATTGTTCCCTCAGACTTTGCTGACTTTACAGCCTCAAGATaGCTGACTTTACAGCCTCAAGATGTAAATAGCTTTAAAAGGTCA +
Preference number: 2 (lower is better)
Translates to: GEIVPSDFADFTASR*LTLQPQDVNSFKRS
Trigger: TGACCTTTTAAAGCTATTTACATCTTGAGGCTGTAAAGTCAGCAATCTTGAGGCTGTAAAGTCAGCAAAGTCTGAGGGAACAATCTCCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR-3UTR TCA 90 bp CCAAGCCCATCCTTCCTGGAATCCCAGCATCATTCCAGAGTTTTGAAAACTTTTATAATCTATCTCATTTaGGCCTCACAACTGCATTGC +
Preference number: 2 (lower is better)
Translates to: PSPSFLESQHHSRVLKTFIIYLI*ASQLHC
Trigger: GCAATGCAGTTGTGAGGCTCAAATGAGATAGATTAT...AAAAGTTTTCAAAACTCTGGAATGATGCTGGGATTCCAGGAAGGATGGGCTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR-3UTR TCA 90 bp CCAATCAGTGATGGCATCTTCCACATACAGCAAAGAAGTGATATAGCCAGGATTCAACCATGTGGGAAATaGTTCAATCAATCACCTCTA +
Preference number: 2 (lower is better)
Translates to: PISDGIFHIQQRSDIARIQPCGK*FNQSPL
Trigger: TAGAGGTGATTGATTGAATCATTTCCCACATGGTTG...AATCCTGGCTATATCACTTCTTTGCTGTATGTGGAAGATGCCATCACTGATTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR CAA 90 bp ATCTACACTGGCAGGACTCAAGGCAGAACTAAGCGAATCAAAGTCTaGTCTTATTTACTGTTCCAAAGTCAAAAACTCGTTTTTGTCCTC +
Preference number: 2 (lower is better)
Translates to: IYTGRTQGRTKRIKV*SYLLFQSQKLVFVL
Trigger: GAGGACAAAAACGAGTTTTTGACTTTGGAACAGTAAATAAGACAAGACTTTGATTCGCTTAGTTCTGCCTTGAGTCCTGCCAGTGTAGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000342272.3
3UTR CAA 90 bp TCAAAGTCTTGTCTTATTTACTGTTCCAAAGTCAAAAACTCGTTTTaGTCCTCAAATATCCTCCCGAAGACAGTGACAGCTATGGTTCAG +
Preference number: 2 (lower is better)
Translates to: SKSCLIYCSKVKNSF*SSNILPKTVTAMVQ
Trigger: CTGAACCATAGCTGTCACTGTCTTCGGGAGGATATTTGAGGACAAAAACGAGTTTTTGACTTTGGAACAGTAAATAAGACAAGACTTTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000342272.3
3UTR GCA 72 bp CCCAGGGACATCTCCCTGGGCTTCCATGGGCTTCTGTaGTCCCCTGAGCTTTCGGTGGGCCCTGATGGGGGA +
Preference number: 3 (lower is better)
Translates to: PRDISLGFHGLL*SPELSVGPDGG
Trigger: TCCCCCATCAGGGCCCACCGAAAGCTCAGGGGAGCACAGAAGCCCATGGAAGCCCAGGGAGATGTCCCTGGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR CCA 72 bp GACCACGGGGCTCCAGGTCCAGAGTCCAGTCCTCTTTaGCCACCCTGCCTGGCACTGCAAAAAGACGGGTCC +
Preference number: 3 (lower is better)
Translates to: DHGAPGPESSPL*PPCLALQKDGS
Trigger: GGACCCGTCTTTTTGCAGTGCCAGGCAGGGTGGCCAAAGAGGACTGGACTCTGGACCTGGAGCCCCGTGGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR CCA 72 bp GCAGGGTGCAGACTGCACAAGGACAGGTCTCTGTGCTaGTCTGAGGGGGTCTCAACACCCACCCCACCCAGC +
Preference number: 3 (lower is better)
Translates to: AGCRLHKDRSLC*SEGVSTPTPPS
Trigger: GCTGGGTGGGGTGGGTGTTGAGACCCCCTCAGACCAGCACAGAGACCTGTCCTTGTGCAGTCTGCACCCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR GCA 72 bp AGTGCAGGGTGCAGACTGCACAAGGACAGGTCTCTGTaGTGGTCTGAGGGGGTCTCAACACCCACCCCACCC +
Preference number: 3 (lower is better)
Translates to: SAGCRLHKDRSL*WSEGVSTPTPP
Trigger: GGGTGGGGTGGGTGTTGAGACCCCCTCAGACCAGCACAGAGACCTGTCCTTGTGCAGTCTGCACCCTGCACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR-3UTR CAA 90 bp AGCCAGGCTCCTGAGGACAGGGTGTGCCTGAACTCGAGCCTACTGTTGGTTGAGGTTGGAGCCCCAGACTaGCCCCTCTCTTGCCGGGAA +
Preference number: 3 (lower is better)
Translates to: SQAPEDRVCLNSSLLLVEVGAPD*PLSCRE
Trigger: TTCCCGGCAAGAGAGGGGCAAGTCTGGGGCTCCAAC...CTCAACCAACAGTAGGCTCGAGTTCAGGCACACCCTGTCCTCAGGAGCCTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR TCA 72 bp CCTGCAGGCTGCATGCAGCTGTCCAGCCTCCATGTGTaGCTCCAGCTCTACCCCATCCACAGCAATGGGCAG +
Preference number: 3 (lower is better)
Translates to: PAGCMQLSSLHV*LQLYPIHSNGQ
Trigger: CTGCCCATTGCTGTGGATGGGGTAGAGCTGGAGTCACACATGGAGGCTGGACAGCTGCATGCAGCCTGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342272.3
3UTR CCA 72 bp AGCACAGGCACCGTGGGAGGCCTCCTGAAACTCTTGTaGGGTGAATGTGAACTGGACCACGGGGCTCCAGGT +
Preference number: 3 (lower is better)
Translates to: STGTVGGLLKLL*GECELDHGAPG
Trigger: ACCTGGAGCCCCGTGGTCCAGTTCACATTCACCCCACAAGAGTTTCAGGAGGCCTCCCACGGTGCCTGTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR CCA 72 bp TTGGATGCCACGTCCTTCCCCAGGCTTGGAGGGGCCTaGAAGCCCTTTCTCTCCATTCTCCTGGAGGCAGGA +
Preference number: 3 (lower is better)
Translates to: LDATSFPRLGGA*KPFLSILLEAG
Trigger: TCCTGCCTCCAGGAGAATGGAGAGAAAGGGCTTCCAGGCCCCTCCAAGCCTGGGGAAGGACGTGGCATCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR CCA 72 bp CCCAAACACCAGCCCCCAAACTTGGCCTGGGAGCTTTaGCAGGCACAGGCTTGTCCCCAGCACCAGCCAAAA +
Preference number: 3 (lower is better)
Translates to: PKHQPPNLAWEL*QAQACPQHQPK
Trigger: TTTTGGCTGGTGCTGGGGACAAGCCTGTGCCTGCCAAAGCTCCCAGGCCAAGTTTGGGGGCTGGTGTTTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR-3UTR CAA 90 bp AGCCAGGCTCCTGAGGACAGGGTGTGCCTGAACTCGAGCCTACTGTTGGTTGAGGCTGTGTGCGTGACCTaGGGCAAGTCCCTCTGCTCT +
Preference number: 3 (lower is better)
Translates to: SQAPEDRVCLNSSLLLVEAVCVT*GKSLCS
Trigger: AGAGCAGAGGGACTTGCCCAAGGTCACGCACACAGC...CTCAACCAACAGTAGGCTCGAGTTCAGGCACACCCTGTCCTCAGGAGCCTGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR TCA 72 bp GGTAGGGGAGCCAGGCTCCTGAGGACAGGGTGTGCCTaGACTCGAGCCTACTGTTGGTTGAGGGACCTTCTT +
Preference number: 3 (lower is better)
Translates to: GRGARLLRTGCA*TRAYCWLRDLL
Trigger: AAGAAGGTCCCTCAACCAACAGTAGGCTCGAGTTCAGGCACACCCTGTCCTCAGGAGCCTGGCTCCCCTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR GCA 72 bp GCAGGGGTCACTCTGGAGTTCCTAGCACACCTGGGCTaGTCTGTGGATTCTGCCAGGCACAGATCTGTGCCA +
Preference number: 3 (lower is better)
Translates to: AGVTLEFLAHLG*SVDSARHRSVP
Trigger: TGGCACAGATCTGTGCCTGGCAGAATCCACAGAGCAGCCCAGGTGTGCTAGGAACTCCAGAGTGACCCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342272.3
3UTR GCA 72 bp GGTACATGCCATCCAGAGTGTCCCCTGCAGGCTGCATaGAGCTGTCCAGCCTCCATGTGTGACTCCAGCTCT +
Preference number: 3 (lower is better)
Translates to: GTCHPECPLQAA*SCPASMCDSSS
Trigger: AGAGCTGGAGTCACACATGGAGGCTGGACAGCTGCATGCAGCCTGCAGGGGACACTCTGGATGGCATGTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342272.3
3UTR GCA 72 bp CTGCACCCAGGCTGTACCCAGTTGGAGCCCCAGACTTaGCCCTCTCTTGCCGGGAAATGCTTCTTGACAAGC +
Preference number: 3 (lower is better)
Translates to: LHPGCTQLEPQT*PSLAGKCFLTS
Trigger: GCTTGTCAAGAAGCATTTCCCGGCAAGAGAGGGGCAAGTCTGGGGCTCCAACTGGGTACAGCCTGGGTGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR GCA 72 bp ATTCCCTCCCCATTTCCACTCCCACCTCCCCTCCTGTaGTTCCTCCAAGCCCATCCTTCCTGGAATCCCAGC +
Preference number: 3 (lower is better)
Translates to: IPSPFPLPPPLL*FLQAHPSWNPS
Trigger: GCTGGGATTCCAGGAAGGATGGGCTTGGAGGAAGCACAGGAGGGGAGGTGGGAGTGGAAATGGGGAGGGAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR GCA 72 bp ACACACATACACACACACACACAGACACACCCCATCTaGAGACCGGCCAACTGGGCTGGCTGCCCACCTGCT +
Preference number: 3 (lower is better)
Translates to: THIHTHTQTHPI*RPANWAGCPPA
Trigger: AGCAGGTGGGCAGCCAGCCCAGTTGGCCGGTCTGCAGATGGGGTGTGTCTGTGTGTGTGTGTGTATGTGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR CCA 72 bp CCAGCCAGAGGATCCATGGGGTCTCCCCTCGTCTATTaGTCCAGAAGGGAAGCTAACTGGACTGGTGGGAGG +
Preference number: 3 (lower is better)
Translates to: PARGSMGSPLVY*SRREANWTGGR
Trigger: CCTCCCACCAGTCCAGTTAGCTTCCCTTCTGGACCAATAGACGAGGGGAGACCCCATGGATCCTCTGGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR CCA 72 bp TTGGAGGGGCCTGGAAGCCCTTTCTCTCCATTCTCCTaGAGGCAGGAAACCATAGCCTTTGGCCCTCACCCC +
Preference number: 3 (lower is better)
Translates to: LEGPGSPFSPFS*RQETIAFGPHP
Trigger: GGGGTGAGGGCCAAAGGCTATGGTTTCCTGCCTCCAGGAGAATGGAGAGAAAGGGCTTCCAGGCCCCTCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR-3UTR CAA 90 bp GAAGGAGCCCAGGACATTCCATTCCTCTTGGCACCACCACCGCCACCCAGCACAGGCCTCCTGAAACTCTaGTGGGGTGAATGTGAACTG +
Preference number: 3 (lower is better)
Translates to: EGAQDIPFLLAPPPPPSTGLLKL*WGECEL
Trigger: CAGTTCACATTCACCCCACAAGAGTTTCAGGAGGCC...TGTGCTGGGTGGCGGTGGTGGTGCCAAGAGGAATGGAATGTCCTGGGCTCCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR TCA 72 bp CTACCACGAGAACGGCACGGGAAAGGCTTGCCCCCATaGTTCAATTACCTCCCACTGGGTCCCTCCCACAAC +
Preference number: 3 (lower is better)
Translates to: LPRERHGKGLPP*FNYLPLGPSHN
Trigger: GTTGTGGGAGGGACCCAGTGGGAGGTAATTGAATCATGGGGGCAAGCCTTTCCCGTGCCGTTCTCGTGGTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR CCA 72 bp TGCCTGTGGTCAAGATTAGAAGAGGAGGCATCGGCCTaGCTGTGTCCTACCCTTGAGCCAACAGGGGGTGCT +
Preference number: 3 (lower is better)
Translates to: CLWSRLEEEASA*LCPTLEPTGGA
Trigger: AGCACCCCCTGTTGGCTCAAGGGTAGGACACAGCCAGGCCGATGCCTCCTCTTCTAATCTTGACCACAGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR-3UTR CAA 90 bp ATGGTACATGCCATCCAGAGTGTCCCCTGCAGGCTGCATGCAGCTGTCCAGCCTCACGTCTGCAGAGATTaGGCCAATCGGGCACATGAA +
Preference number: 3 (lower is better)
Translates to: MVHAIQSVPCRLHAAVQPHVCRD*ANRAHE
Trigger: TTCATGTGCCCGATTGGCCAAATCTCTGCAGACGTG...AGGCTGGACAGCTGCATGCAGCCTGCAGGGGACACTCTGGATGGCATGTACCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342272.3
3UTR-3UTR CAA 90 bp AGGACAGGTCTCTGTGCTGGTCTGAGGGGGTCTCAACACCCACCCCACCCAGCTGGAAGGGGGATGGGATaGAATATCAATGTCCTGGTT +
Preference number: 3 (lower is better)
Translates to: RTGLCAGLRGSQHPPHPAGRGMG*NINVLV
Trigger: AACCAGGACATTGATATTCAATCCCATCCCCCTTCC...AGCTGGGTGGGGTGGGTGTTGAGACCCCCTCAGACCAGCACAGAGACCTGTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR TCA 72 bp GCTCAGGAAGCCGCCTCCTTTGCACACCATCCAAAGTaGGTTCAATACAGCCACCCCTGCCCCCAACTCATC +
Preference number: 3 (lower is better)
Translates to: AQEAASFAHHPK*VQYSHPCPQLI
Trigger: GATGAGTTGGGGGCAGGGGTGGCTGTATTGAACTCACTTTGGATGGTGTGCAAAGGAGGCGGCTTCCTGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR GCA 72 bp GTGCTCTCCTGGGGTCTCCATAGAATGCCCAGAAGCTaGCAAGACAGCAGCTCAGCTGACTGTCACGCTGAT +
Preference number: 3 (lower is better)
Translates to: VLSWGLHRMPRS*QDSSSADCHAD
Trigger: ATCAGCGTGACAGTCAGCTGAGCTGCTGTCTTGGCAGCTTCTGGGCATTCTATGGAGACCCCAGGAGAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342272.3
3UTR GCA 72 bp AAGGGTCTGCTGTGCTCTCCTGGGGTCTCCATAGAATaGCCAGAAGCTGCCAAGACAGCAGCTCAGCTGACT +
Preference number: 3 (lower is better)
Translates to: KGLLCSPGVSIE*PEAAKTAAQLT
Trigger: AGTCAGCTGAGCTGCTGTCTTGGCAGCTTCTGGGCATTCTATGGAGACCCCAGGAGAGCACAGCAGACCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342272.3
3UTR GCA 72 bp GACAAGCAGCTTGTCTTCAACACCTGCCTTAGTGTCTaGCCCAGGGACATCTCCCTGGGCTTCCATGGGCTT +
Preference number: 3 (lower is better)
Translates to: DKQLVFNTCLSV*PRDISLGFHGL
Trigger: AAGCCCATGGAAGCCCAGGGAGATGTCCCTGGGGCAGACACTAAGGCAGGTGTTGAAGACAAGCTGCTTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR CCA 72 bp TGGGCAAGTCCCTCTGCTCTAAGCCTCTGTGGAATGTaGCGATCCCCTCAGGCTCCCCCACTGATTGAGATA +
Preference number: 3 (lower is better)
Translates to: WASPSALSLCGM*RSPQAPPLIEI
Trigger: TATCTCAATCAGTGGGGGAGCCTGAGGGGATCGCCACATTCCACAGAGGCTTAGAGCAGAGGGACTTGCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR CCA 72 bp TGTTGGTTGAGGGACCTTCTTCTCCAACCCCCTCGCTaGGAACCACCGGCTGTGAGAGTAACTTCATGGGCA +
Preference number: 3 (lower is better)
Translates to: CWLRDLLLQPPR*EPPAVRVTSWA
Trigger: TGCCCATGAAGTTACTCTCACAGCCGGTGGTTCCCAGCGAGGGGGTTGGAGAAGAAGGTCCCTCAACCAACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR GCA 72 bp TTGGAGCCCCAGACTTGCCCCTCTCTTGCCGGGAAATaGTTCTTGACAAGCAGCTTGTCTTCAACACCTGCC +
Preference number: 3 (lower is better)
Translates to: LEPQTCPSLAGK*FLTSSLSSTPA
Trigger: GGCAGGTGTTGAAGACAAGCTGCTTGTCAAGAAGCATTTCCCGGCAAGAGAGGGGCAAGTCTGGGGCTCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR GCA 72 bp CCAGCCAGAGCCCGTGAGCAGATGCGGGTTTATTATTaGACAGACTGCAGCATCCTGAACCCCAAACCCAAC +
Preference number: 3 (lower is better)
Translates to: PARAREQMRVYY*TDCSILNPKPN
Trigger: GTTGGGTTTGGGGTTCAGGATGCTGCAGTCTGTGCAATAATAAACCCGCATCTGCTCACGGGCTCTGGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR GCA 72 bp AGTCTCCAAACCTGGGGCTCAGGAAGCCGCCTCCTTTaGACACCATCCAAAGTGAGTTCAATACAGCCACCC +
Preference number: 3 (lower is better)
Translates to: SLQTWGSGSRLL*TPSKVSSIQPP
Trigger: GGGTGGCTGTATTGAACTCACTTTGGATGGTGTGCAAAGGAGGCGGCTTCCTGAGCCCCAGGTTTGGAGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR CCA 72 bp TCTCCCCTCGTCTATTGGTCCAGAAGGGAAGCTAACTaGACTGGTGGGAGGAGACAGAGCACTGTGTTCTGG +
Preference number: 3 (lower is better)
Translates to: SPLVYWSRREAN*TGGRRQSTVFW
Trigger: CCAGAACACAGTGCTCTGTCTCCTCCCACCAGTCCAGTTAGCTTCCCTTCTGGACCAATAGACGAGGGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR CCA 72 bp ACTGATGGTGGCCCTGGAGATCCCCAAACTTGTATCTaGGGTCTGAAGGGAGAGGGGGAGATTGTTCCCTCA +
Preference number: 3 (lower is better)
Translates to: TDGGPGDPQTCI*GLKGEGEIVPS
Trigger: TGAGGGAACAATCTCCCCCTCTCCCTTCAGACCCCAGATACAAGTTTGGGGATCTCCAGGGCCACCATCAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR-3UTR CAA 90 bp AGAGTCCTGCAGAGACCTCAAGGCAGTGGGCCAGCATTGCTTTTAAGTTCATGCATCACCTCCATCCCTTaGGGGTCCCTGGGATCCTCT +
Preference number: 3 (lower is better)
Translates to: RVLQRPQGSGPALLLSSCITSIP*GSLGSS
Trigger: AGAGGATCCCAGGGACCCCAAAGGGATGGAGGTGAT...GCATGAACTTAAAAGCAATGCTGGCCCACTGCCTTGAGGTCTCTGCAGGACTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR TCA 72 bp GGGGCACGTCTGCAGAGATTTGGCCAATCGGGCACATaGATCACTGAAAACAAGGCCGTGGACAGGAAAGAC +
Preference number: 3 (lower is better)
Translates to: GARLQRFGQSGT*ITENKAVDRKD
Trigger: GTCTTTCCTGTCCACGGCCTTGTTTTCAGTGATTCATGTGCCCGATTGGCCAAATCTCTGCAGACGTGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000342272.3
3UTR GCA 72 bp TACGGTCCGCTTTTCTGTTCTGCTAAGGGTCTGCTGTaGTCTCCTGGGGTCTCCATAGAATGCCCAGAAGCT +
Preference number: 3 (lower is better)
Translates to: YGPLFCSAKGLL*SPGVSIECPEA
Trigger: AGCTTCTGGGCATTCTATGGAGACCCCAGGAGAGCACAGCAGACCCTTAGCAGAACAGAAAAGCGGACCGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000342272.3
3UTR GCA 72 bp GCCCGTGAGCAGATGCGGGTTTATTATTGCACAGACTaGAGCATCCTGAACCCCAAACCCAACCCCAAACAC +
Preference number: 3 (lower is better)
Translates to: AREQMRVYYCTD*SILNPKPNPKH
Trigger: GTGTTTGGGGTTGGGTTTGGGGTTCAGGATGCTGCAGTCTGTGCAATAATAAACCCGCATCTGCTCACGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR GCA 72 bp GTCTTTCAGCCCCCACTCAAACTGAAGCCCTTCAGCTaGCCCTCAAGGATCGTGAGAACAAGGACACAGATG +
Preference number: 3 (lower is better)
Translates to: VFQPPLKLKPFS*PSRIVRTRTQM
Trigger: CATCTGTGTCCTTGTTCTCACGATCCTTGAGGGGCAGCTGAAGGGCTTCAGTTTGAGTGGGGGCTGAAAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR GCA 72 bp CTCTGGAGCTCCCACTGGGTTGGACTTTGTCAGGCCTaGATCAAGTTAGACTTCTTCCTCTGCCCTGTTCTG +
Preference number: 3 (lower is better)
Translates to: LWSSHWVGLCQA*IKLDFFLCPVL
Trigger: CAGAACAGGGCAGAGGAAGAAGTCTAACTTGATGCAGGCCTGACAAAGTCCAACCCAGTGGGAGCTCCAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR CCA 72 bp TTGCCGTACATGAGGGTCTCACCTGCAGTTGGTCTGTaGACAAAATATGACTCCCCGCTCAGTCCAGGCTCT +
Preference number: 3 (lower is better)
Translates to: LPYMRVSPAVGL*TKYDSPLSPGS
Trigger: AGAGCCTGGACTGAGCGGGGAGTCATATTTTGTCCACAGACCAACTGCAGGTGAGACCCTCATGTACGGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR CCA 72 bp GGAAAGGCTTGCCCCCATGATTCAATTACCTCCCACTaGGTCCCTCCCACAACGTGTGGGTGGGAATTTAAG +
Preference number: 3 (lower is better)
Translates to: GKACPHDSITSH*VPPTTCGWEFK
Trigger: CTTAAATTCCCACCCACACGTTGTGGGAGGGACCCAGTGGGAGGTAATTGAATCATGGGGGCAAGCCTTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR TCA 72 bp AGACAGCCTGGAGTGAATGGTGAATGTTCTGACACATaGGGTGCCCTGGCATCTGTTGCCGTACATGAGGGT +
Preference number: 3 (lower is better)
Translates to: RQPGVNGECSDT*GALASVAVHEG
Trigger: ACCCTCATGTACGGCAACAGATGCCAGGGCACCTCATGTGTCAGAACATTCACCATTCACTCCAGGCTGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR GCA 72 bp AATAAAAACATGGTACATGCCATCCAGAGTGTCCCCTaGAGGCTGCATGCAGCTGTCCAGCCTCCATGTGTG +
Preference number: 3 (lower is better)
Translates to: NKNMVHAIQSVP*RLHAAVQPPCV
Trigger: CACACATGGAGGCTGGACAGCTGCATGCAGCCTGCAGGGGACACTCTGGATGGCATGTACCATGTTTTTATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000342272.3
3UTR GCA 72 bp ATGACTCCCCGCTCAGTCCAGGCTCTGTCACTGACTTaGTGTGTGATCCTTACAAATCACGACACTCTCTCC +
Preference number: 3 (lower is better)
Translates to: MTPRSVQALSLT*CVILTNHDTLS
Trigger: GGAGAGAGTGTCGTGATTTGTAAGGATCACACAGCAAGTCAGTGACAGAGCCTGGACTGAGCGGGGAGTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR CCA 72 bp CTGCCCTGGAAGAGTCCTGCAGAGACCTCAAGGCAGTaGGCCAGCATTGCTTTTAAGTTCATGCATGGTACA +
Preference number: 3 (lower is better)
Translates to: LPWKSPAETSRQ*ASIAFKFMHGT
Trigger: TGTACCATGCATGAACTTAAAAGCAATGCTGGCCCACTGCCTTGAGGTCTCTGCAGGACTCTTCCAGGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR CCA 72 bp AGTTTTTCAGGCATGGCACCTCCAAAGGTCATCATCTaGGCCTGCATCTCTCCCAGAACAGCCAGGTCTTCT +
Preference number: 3 (lower is better)
Translates to: SFSGMAPPKVII*ACISPRTARSS
Trigger: AGAAGACCTGGCTGTTCTGGGAGAGATGCAGGCCCAGATGATGACCTTTGGAGGTGCCATGCCTGAAAAACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR CCA 72 bp CACTCACTGAATGTCTACTCTGCCCCGAGACCTAAGTaGGACAATGGGGATGGTACTACAGGCTGTACTGTC +
Preference number: 3 (lower is better)
Translates to: HSLNVYSAPRPK*DNGDGTTGCTV
Trigger: GACAGTACAGCCTGTAGTACCATCCCCATTGTCCCACTTAGGTCTCGGGGCAGAGTAGACATTCAGTGAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR-3UTR CAA 90 bp GGGACAATGGGGATGGTACTACAGGCTGTACTGTCTTGTCTGTTTACCAAAACCTGCAGTGGCTTGATCTaGGCTCACTGCAACCTCCGC +
Preference number: 3 (lower is better)
Translates to: GTMGMVLQAVLSCLFTKTCSGLI*AHCNLR
Trigger: GCGGAGGTTGCAGTGAGCCAAGATCAAGCCACTGCA...GGTTTTGGTAAACAGACAAGACAGTACAGCCTGTAGTACCATCCCCATTGTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR-3UTR CAA 90 bp AAGGGTCTGCTGTGCTCTCCTGGGGTCTCCATAGAATGCCCAGAAGCTGCCAAGATGCTCAGTGCTTCATaGTCTTGTTTCATTGTCTCG +
Preference number: 3 (lower is better)
Translates to: KGLLCSPGVSIECPEAAKMLSAS*SCFIVS
Trigger: CGAGACAATGAAACAAGACAATGAAGCACTGAGCAT...CTTGGCAGCTTCTGGGCATTCTATGGAGACCCCAGGAGAGCACAGCAGACCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342272.3
3UTR-3UTR CAA 90 bp CCAAGCCCATCCTTCCTGGAATCCCAGCATCATTCCAGAGTTTTGAAAACTTTTAGAGTCCAGTCCTCTTaGGCCACCCTGCCTGGCACT +
Preference number: 3 (lower is better)
Translates to: PSPSFLESQHHSRVLKTFRVQSS*ATLPGT
Trigger: AGTGCCAGGCAGGGTGGCCAAAGAGGACTGGACTCT...AAAAGTTTTCAAAACTCTGGAATGATGCTGGGATTCCAGGAAGGATGGGCTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR-3UTR CAA 90 bp GAGAGAGTGAGGGAGTGGGAACTGGCCTCCATAGGCATAGTCAGAGTTTTGCACGAAGGTTCCCAAGCATaGAAGGGAAATGGGAAAGCT +
Preference number: 3 (lower is better)
Translates to: ERVREWELASIGIVRVLHEGSQA*KGNGKA
Trigger: AGCTTTCCCATTTCCCTTCAATGCTTGGGAACCTTC...GTGCAAAACTCTGACTATGCCTATGGAGGCCAGTTCCCACTCCCTCACTCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR-3UTR CAA 90 bp CAACCCATCCCCACTCCCCAACCATACTGCCTCTTATGGCCACCATATCCATTTAACTCGAGCCTACTGTaGGTTGAGGGACCTTCTTCT +
Preference number: 3 (lower is better)
Translates to: QPIPTPQPYCLLWPPYPFNSSLL*VEGPSS
Trigger: AGAAGAAGGTCCCTCAACCAACAGTAGGCTCGAGTT...AAATGGATATGGTGGCCATAAGAGGCAGTATGGTTGGGGAGTGGGGATGGGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR CCA 72 bp CCAGTAACAGAGCAAGGGAGGGGTATAAAAGCCCAATaGGAGATGCTCTACAAGCAATCCTTGCTCTGGAGC +
Preference number: 3 (lower is better)
Translates to: PVTEQGRGIKAQ*EMLYKQSLLWS
Trigger: GCTCCAGAGCAAGGATTGCTTGTAGAGCATCTCCCATTGGGCTTTTATACCCCTCCCTTGCTCTGTTACTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR TCA 72 bp AGAAGGTTCCCAAGCATTGAAGGGAAATGGGAAAGCTaGCCCTATCAGAAGCAAACTCCTAGGTCCCAGAGC +
Preference number: 3 (lower is better)
Translates to: RRFPSIEGKWES*PYQKQTPRSQS
Trigger: GCTCTGGGACCTAGGAGTTTGCTTCTGATAGGGTCAGCTTTCCCATTTCCCTTCAATGCTTGGGAACCTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR TCA 72 bp CGATCCCCTCAGGCTCCCCCACTGATTGAGATATTCTaGCTAAACAACTGGTATCTGAATCACCTCCATCCC +
Preference number: 3 (lower is better)
Translates to: RSPQAPPLIEIF*LNNWYLNHLHP
Trigger: GGGATGGAGGTGATTCAGATACCAGTTGTTTAGTCAGAATATCTCAATCAGTGGGGGAGCCTGAGGGGATCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR TCA 72 bp ATTATGAAACTTCCCTTCTTGCCCGAATCCCAAATCTaGCTCCCACGGTTCCTAGGTCCCCTCCCTTTCACT +
Preference number: 3 (lower is better)
Translates to: IMKLPFLPESQI*LPRFLGPLPFT
Trigger: AGTGAAAGGGAGGGGACCTAGGAACCGTGGGAGTCAGATTTGGGATTCGGGCAAGAAGGGAAGTTTCATAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR TCA 72 bp CAGTCCCAGCTCTGTCCTTCCCTCTCTGTGATACCTTaGACCAATCACTCCATCTCCCCAAGGCTCAATTTT +
Preference number: 3 (lower is better)
Translates to: QSQLCPSLSVIP*TNHSISPRLNF
Trigger: AAAATTGAGCCTTGGGGAGATGGAGTGATTGGTTCAAGGTATCACAGAGAGGGAAGGACAGAGCTGGGACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR TCA 72 bp GAAGGGAGAGGGGGAGATTGTTCCCTCAGACTTTGCTaGCTTTACAGCCTCAAGATTGCTGACTTTACAGCC +
Preference number: 3 (lower is better)
Translates to: EGRGGDCSLRLC*LYSLKIADFTA
Trigger: GGCTGTAAAGTCAGCAATCTTGAGGCTGTAAAGTCAGCAAAGTCTGAGGGAACAATCTCCCCCTCTCCCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR CCA 72 bp CTACAAGCAATCCTTGCTCTGGAGCTCCCACTGGGTTaGACTTTGTCAGGCCTGCATCAAGTTAGACTTCTT +
Preference number: 3 (lower is better)
Translates to: LQAILALELPLG*TLSGLHQVRLL
Trigger: AAGAAGTCTAACTTGATGCAGGCCTGACAAAGTCCAACCCAGTGGGAGCTCCAGAGCAAGGATTGCTTGTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR TCA 72 bp TCTGCAGAGATTTGGCCAATCGGGCACATGAATCACTaGAAACAAGGCCGTGGACAGGAAAGACTAATACGG +
Preference number: 3 (lower is better)
Translates to: SAEIWPIGHMNH*KQGRGQERLIR
Trigger: CCGTATTAGTCTTTCCTGTCCACGGCCTTGTTTTCAGTGATTCATGTGCCCGATTGGCCAAATCTCTGCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342272.3
3UTR TCA 72 bp GCAAGTGTGAAGCTAAGGGAGAAGGTTCCCAAGCATTaGAGGGAAATGGGAAAGCTGACCCTATCAGAAGCA +
Preference number: 3 (lower is better)
Translates to: ASVKLREKVPKH*REMGKLTLSEA
Trigger: TGCTTCTGATAGGGTCAGCTTTCCCATTTCCCTTCAATGCTTGGGAACCTTCTCCCTTAGCTTCACACTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR TCA 72 bp CAGAACAGCCAGGTCTTCTGTGGGTCCATCAGATTATaGAACTTCCCTTCTTGCCCGAATCCCAAATCTGAC +
Preference number: 3 (lower is better)
Translates to: QNSQVFCGSIRL*NFPSCPNPKSD
Trigger: GTCAGATTTGGGATTCGGGCAAGAAGGGAAGTTTCATAATCTGATGGACCCACAGAAGACCTGGCTGTTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR TCA 72 bp ATGGCCACCATATCCATTTCCTCAATAAGCACTCACTaGATGTCTACTCTGCCCCGAGACCTAAGTGGGACA +
Preference number: 3 (lower is better)
Translates to: MATISISSISTH*MSTLPRDLSGT
Trigger: TGTCCCACTTAGGTCTCGGGGCAGAGTAGACATTCAGTGAGTGCTTATTGAGGAAATGGATATGGTGGCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR CCA 72 bp GCCAATCGGGCACATGAATCACTGAAAACAAGGCCGTaGACAGGAAAGACTAATACGGTCCGCTTTTCTGTT +
Preference number: 3 (lower is better)
Translates to: ANRAHESLKTRP*TGKTNTVRFSV
Trigger: AACAGAAAAGCGGACCGTATTAGTCTTTCCTGTCCACGGCCTTGTTTTCAGTGATTCATGTGCCCGATTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000342272.3
3UTR CCA 72 bp AACTGGACTGGTGGGAGGAGACAGAGCACTGTGTTCTaGGATATTCAAACTGACCTTGTCCATTTCCTCTAC +
Preference number: 3 (lower is better)
Translates to: NWTGGRRQSTVF*DIQTDLVHFLY
Trigger: GTAGAGGAAATGGACAAGGTCAGTTTGAATATCCCAGAACACAGTGCTCTGTCTCCTCCCACCAGTCCAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR CCA 72 bp CACCCACAGGAAGCACAAGGGCCCAGAGACCTAGTGTaGTACAAAACATCTTTAAGTGAGGTACATCCAAGT +
Preference number: 3 (lower is better)
Translates to: HPQEAQGPRDLV*YKTSLSEVHPS
Trigger: ACTTGGATGTACCTCACTTAAAGATGTTTTGTACCACACTAGGTCTCTGGGCCCTTGTGCTTCCTGTGGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR-3UTR CAA 90 bp ATTCCTAAAAAGTCAAGAGAACTGCTTTCCTGCCACCAACTTGCTGTGTGCGTGGCCGGGAAATGCTTCTaGACAAGCAGCTTGTCTTCA +
Preference number: 3 (lower is better)
Translates to: IPKKSRELLSCHQLAVCVAGKCF*TSSLSS
Trigger: TGAAGACAAGCTGCTTGTCAAGAAGCATTTCCCGGC...CACGCACACAGCAAGTTGGTGGCAGGAAAGCAGTTCTCTTGACTTTTTAGGAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR-3UTR CAA 90 bp GACCCATCAGACTTCCTAGAGCTGCCTGTGGTCAAGATTAGAAGAGGAGGCATCTCAAAGGGCAGGCTCTaGATTCTATTGTCATCTACT +
Preference number: 3 (lower is better)
Translates to: DPSDFLELPVVKIRRGGISKGRL*ILLSST
Trigger: AGTAGATGACAATAGAATCAAGAGCCTGCCCTTTGA...GATGCCTCCTCTTCTAATCTTGACCACAGGCAGCTCTAGGAAGTCTGATGGGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR-3UTR CAA 90 bp GGGACAATGGGGATGGTACTACAGGCTGTACTGTCTTGTCTGTTTACCAAAACCGGCTCTGTCACTGACTaGCTGTGTGATCCTTACAAA +
Preference number: 3 (lower is better)
Translates to: GTMGMVLQAVLSCLFTKTGSVTD*LCDPYK
Trigger: TTTGTAAGGATCACACAGCAAGTCAGTGACAGAGCC...GGTTTTGGTAAACAGACAAGACAGTACAGCCTGTAGTACCATCCCCATTGTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR-3UTR CAA 90 bp CAACCCATCCCCACTCCCCAACCATACTGCCTCTTATGGCCACCATATCCATTTATATTCAAACTGACCTaGTCCATTTCCTCTACTGTC +
Preference number: 3 (lower is better)
Translates to: QPIPTPQPYCLLWPPYPFIFKLT*SISSTV
Trigger: GACAGTAGAGGAAATGGACAAGGTCAGTTTGAATAT...AAATGGATATGGTGGCCATAAGAGGCAGTATGGTTGGGGAGTGGGGATGGGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR-3UTR CAA 90 bp CAACCCATCCCCACTCCCCAACCATACTGCCTCTTATGGCCACCATATCCATTTCTGGTTGGCCATACTTaGTCATACTGTTACTTATCA +
Preference number: 3 (lower is better)
Translates to: QPIPTPQPYCLLWPPYPFLVGHT*SYCYLS
Trigger: TGATAAGTAACAGTATGACAAAGTATGGCCAACCAG...AAATGGATATGGTGGCCATAAGAGGCAGTATGGTTGGGGAGTGGGGATGGGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR TCA 72 bp TGGAATGTGGCGATCCCCTCAGGCTCCCCCACTGATTaGGATATTCTGACTAAACAACTGGTATCTGAATCA +
Preference number: 3 (lower is better)
Translates to: WNVAIPSGSPTD*DILTKQLVSES
Trigger: TGATTCAGATACCAGTTGTTTAGTCAGAATATCTCAATCAGTGGGGGAGCCTGAGGGGATCGCCACATTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR GCA 72 bp GTACTTATTCCTAAAAAGTCAAGAGAACTGCTTTCCTaGCACCAACTTGCTGTGTGCGTGACCTTGGGCAAG +
Preference number: 3 (lower is better)
Translates to: VLIPKKSRELLS*HQLAVCVTLGK
Trigger: CTTGCCCAAGGTCACGCACACAGCAAGTTGGTGGCAGGAAAGCAGTTCTCTTGACTTTTTAGGAATAAGTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR GCA 72 bp GCTTTTAAGTTCATGCATGGTACAAACCACCTTAAATaGATTCCGGGCATGGCAGGAGACCCATCAGACTTC +
Preference number: 3 (lower is better)
Translates to: AFKFMHGTNHLK*IPGMAGDPSDF
Trigger: GAAGTCTGATGGGTCTCCTGCCATGCCCGGAATGCATTTAAGGTGGTTTGTACCATGCATGAACTTAAAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR CCA 72 bp GCTGATTCTACATTCGAAATGGAATCATGTCTGGCATaGATTCCATCTACACTGGCAGGACTCAAGGCAGAA +
Preference number: 3 (lower is better)
Translates to: ADSTFEMESCLA*IPSTLAGLKAE
Trigger: TTCTGCCTTGAGTCCTGCCAGTGTAGATGGAATCCATGCCAGACATGATTCCATTTCGAATGTAGAATCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342272.3
3UTR CCA 72 bp GGACGAATACCTACACCATGGAGATACTGCGAAGAATaGAAAATAGCAGTGCATTTACCATCTGCTCACACC +
Preference number: 3 (lower is better)
Translates to: GRIPTPWRYCEE*KIAVHLPSAHT
Trigger: GGTGTGAGCAGATGGTAAATGCACTGCTATTTTCCATTCTTCGCAGTATCTCCATGGTGTAGGTATTCGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR-3UTR CAA 90 bp CCAATCAGTGATGGCATCTTCCACATACAGCAAAGAAGTGATATAGCCAGGATTGGACAGAGCCAAGATTaGAACCAGCAACCATGTTCT +
Preference number: 3 (lower is better)
Translates to: PISDGIFHIQQRSDIARIGQSQD*NQQPCS
Trigger: AGAACATGGTTGCTGGTTCAAATCTTGGCTCTGTCC...AATCCTGGCTATATCACTTCTTTGCTGTATGTGGAAGATGCCATCACTGATTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR TCA 72 bp ACAACGTGTGGGTGGGAATTTAAGATGAGATTTGGGTaGGAACACAGCCAAACCATATCACCCAGTAACAGA +
Preference number: 3 (lower is better)
Translates to: TTCGWEFKMRFG*EHSQTISPSNR
Trigger: TCTGTTACTGGGTGATATGGTTTGGCTGTGTTCTCACCCAAATCTCATCTTAAATTCCCACCCACACGTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR CCA 72 bp AAAAGAGGAAGAAGAAGTGACTGTAATGTAGGCACCTaGTCAAGACAGCCTGGAGTGAATGGTGAATGTTCT +
Preference number: 3 (lower is better)
Translates to: KRGRRSDCNVGT*SRQPGVNGECS
Trigger: AGAACATTCACCATTCACTCCAGGCTGTCTTGACCAGGTGCCTACATTACAGTCACTTCTTCTTCCTCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR CCA 72 bp ACTCTGGACACTGAAGCACTGGTTAGCTTCCCTGGTTaGCCATACTTTGTCATACTGTTACTTATCAATGCT +
Preference number: 3 (lower is better)
Translates to: TLDTEALVSFPG*PYFVILLLINA
Trigger: AGCATTGATAAGTAACAGTATGACAAAGTATGGCCAACCAGGGAAGCTAACCAGTGCTTCAGTGTCCAGAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR CCA 72 bp ATTATGCTGATTCTACATTCGAAATGGAATCATGTCTaGCATGGATTCCATCTACACTGGCAGGACTCAAGG +
Preference number: 3 (lower is better)
Translates to: IMLILHSKWNHV*HGFHLHWQDSR
Trigger: CCTTGAGTCCTGCCAGTGTAGATGGAATCCATGCCAGACATGATTCCATTTCGAATGTAGAATCAGCATAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342272.3
3UTR CCA 72 bp TTGGCCATACTTTGTCATACTGTTACTTATCAATGCTaGCAAGGTAACAGATACCGAGGACACGGGTGTTTA +
Preference number: 3 (lower is better)
Translates to: LAILCHTVTYQC*QGNRYRGHGCL
Trigger: TAAACACCCGTGTCCTCGGTATCTGTTACCTTGCCAGCATTGATAAGTAACAGTATGACAAAGTATGGCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR-3UTR CAA 90 bp GCAGGACTCAAGGCAGAACTAAGCGAATCAAAGTCTTGTCTTATTTACTGTTCCGTCAAAAACTCGTTTTaGTCCTCAAATATCCTCCCG +
Preference number: 3 (lower is better)
Translates to: AGLKAELSESKSCLIYCSVKNSF*SSNILP
Trigger: CGGGAGGATATTTGAGGACAAAAACGAGTTTTTGAC...GGAACAGTAAATAAGACAAGACTTTGATTCGCTTAGTTCTGCCTTGAGTCCTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000342272.3
3UTR GCA 72 bp AAAATGGGTGGACGAATACCTACACCATGGAGATACTaGGAAGAATGGAAAATAGCAGTGCATTTACCATCT +
Preference number: 3 (lower is better)
Translates to: KMGGRIPTPWRY*EEWKIAVHLPS
Trigger: AGATGGTAAATGCACTGCTATTTTCCATTCTTCGCAGTATCTCCATGGTGTAGGTATTCGTCCACCCATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR-3UTR CAA 90 bp ACTGGCAGGACTCAAGGCAGAACTAAGCGAATCAAAGTCTTGTCTTATTTACTGCATTGTCTTGTTTCATaGTCTCGACCATATTCTGAG +
Preference number: 3 (lower is better)
Translates to: TGRTQGRTKRIKVLSYLLHCLVS*SRPYSE
Trigger: CTCAGAATATGGTCGAGACAATGAAACAAGACAATG...CAGTAAATAAGACAAGACTTTGATTCGCTTAGTTCTGCCTTGAGTCCTGCCAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342272.3
3UTR-3UTR CAA 90 bp CCAATCAGTGATGGCATCTTCCACATACAGCAAAGAAGTGATATAGCCAGGATTAGGCTCTTGATTCTATaGTCATCTACTCATAGAAGT +
Preference number: 3 (lower is better)
Translates to: PISDGIFHIQQRSDIARIRLLIL*SSTHRS
Trigger: ACTTCTATGAGTAGATGACAATAGAATCAAGAGCCT...AATCCTGGCTATATCACTTCTTTGCTGTATGTGGAAGATGCCATCACTGATTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR GCA 90 bp AGGACAGGTCTCTGTGCTGGTCTGAGGGGGTCTCAACACCCACCCCACCCAGCTTCACGCTCGTGCAGCTaGGGGCTCTCGCGGGGCGGC +
Preference number: 4 (lower is better)
Translates to: RTGLCAGLRGSQHPPHPASRSCS*GLSRGG
Trigger: GCCGCCCCGCGAGAGCCCGCAGCTGCACGAGCGTGA...AGCTGGGTGGGGTGGGTGTTGAGACCCCCTCAGACCAGCACAGAGACCTGTCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR TCA 90 bp GGGACAGGAGCAGATCAGGAAGCTCAAGAGACCAGGGCGCTTCTCTCTGGGCTCCGCCCTCGGACGGAGTaGCTGACCGGCTGCCCTCAC +
Preference number: 4 (lower is better)
Translates to: GTGADQEAQETRALLSGLRPRTE*LTGCPH
Trigger: GTGAGGGCAGCCGGTCAGTCACTCCGTCCGAGGGCG...GAGCCCAGAGAGAAGCGCCCTGGTCTCTTGAGCTTCCTGATCTGCTCCTGTCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR GCA 90 bp GGGACAGGAGCAGATCAGGAAGCTCAAGAGACCAGGGCGCTTCTCTCTGGGCTCGGACGTGCGCGACTCTaGGCGCCGCAGCTTGCCCAG +
Preference number: 4 (lower is better)
Translates to: GTGADQEAQETRALLSGLGRARL*APQLAQ
Trigger: CTGGGCAAGCTGCGGCGCGCAGAGTCGCGCACGTCC...GAGCCCAGAGAGAAGCGCCCTGGTCTCTTGAGCTTCCTGATCTGCTCCTGTCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR GCA 90 bp GGGACAGGAGCAGATCAGGAAGCTCAAGAGACCAGGGCGCTTCTCTCTGGGCTCGGCTACCCACGGACGTaGGCGACTCTGCGCGCCGCA +
Preference number: 4 (lower is better)
Translates to: GTGADQEAQETRALLSGLGYPRT*ATLRAA
Trigger: TGCGGCGCGCAGAGTCGCGCACGTCCGTGGGTAGCC...GAGCCCAGAGAGAAGCGCCCTGGTCTCTTGAGCTTCCTGATCTGCTCCTGTCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CCA 90 bp GGGACAGGAGCAGATCAGGAAGCTCAAGAGACCAGGGCGCTTCTCTCTGGGCTCGGCCGTCGGGCAGCGTaGTGCAGCCATAGCCGTGGC +
Preference number: 4 (lower is better)
Translates to: GTGADQEAQETRALLSGLGRRAA*CSHSRG
Trigger: GCCACGGCTATGGCTGCACCACGCTGCCCGACGGCC...GAGCCCAGAGAGAAGCGCCCTGGTCTCTTGAGCTTCCTGATCTGCTCCTGTCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CCA 90 bp CCAGCCAGAGGATCCATGGGGTCTCCCCTCGTCTATTGGTCCAGAAGGGAAGCTGGCTGCCCTCACCGCTaGGCTCGCCGTTCCAGGCGC +
Preference number: 4 (lower is better)
Translates to: PARGSMGSPLVYWSRREAGCPHR*ARRSRR
Trigger: GCGCCTGGAACGGCGAGCCCAGCGGTGAGGGCAGCC...AGCTTCCCTTCTGGACCAATAGACGAGGGGAGACCCCATGGATCCTCTGGCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CCA 90 bp AGGACAGGTCTCTGTGCTGGTCTGAGGGGGTCTCAACACCCACCCCACCCAGCTTGCAGACCGGCCAACTaGGCTGGCTGCCCACCTGCT +
Preference number: 4 (lower is better)
Translates to: RTGLCAGLRGSQHPPHPACRPAN*AGCPPA
Trigger: AGCAGGTGGGCAGCCAGCCCAGTTGGCCGGTCTGCA...AGCTGGGTGGGGTGGGTGTTGAGACCCCCTCAGACCAGCACAGAGACCTGTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR CAA 72 bp GGACCACGGGGCTCCAGGTCCAGAGTCCAGTCCTCTTaGGCCACCCTGCCTGGCACTGCAAAAAGACGGGTC +
Preference number: 4 (lower is better)
Translates to: GPRGSRSRVQSS*ATLPGTAKRRV
Trigger: GACCCGTCTTTTTGCAGTGCCAGGCAGGGTGGCCAAAGAGGACTGGACTCTGGACCTGGAGCCCCGTGGTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR TCA 90 bp AGGACAGGTCTCTGTGCTGGTCTGAGGGGGTCTCAACACCCACCCCACCCAGCTGGCGCTTGGTGTCCTTaGCCAGCACGTTGTGGCGGT +
Preference number: 4 (lower is better)
Translates to: RTGLCAGLRGSQHPPHPAGAWCP*PARCGG
Trigger: ACCGCCACAACGTGCTGGTCAAGGACACCAAGCGCC...AGCTGGGTGGGGTGGGTGTTGAGACCCCCTCAGACCAGCACAGAGACCTGTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR TCA 90 bp AGGACAGGTCTCTGTGCTGGTCTGAGGGGGTCTCAACACCCACCCCACCCAGCTGCTCGGCTTTGGGGATaGTGGGCTTGGGCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: RTGLCAGLRGSQHPPHPAARLWG*WAWAPA
Trigger: AGCTGGAGCCCAAGCCCATCATCCCCAAAGCCGAGC...AGCTGGGTGGGGTGGGTGTTGAGACCCCCTCAGACCAGCACAGAGACCTGTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR TCA 90 bp AGGACAGGTCTCTGTGCTGGTCTGAGGGGGTCTCAACACCCACCCCACCCAGCTCAGGCCTCCTGCAGGTaGCCCTCTAGCATCCCAAGC +
Preference number: 4 (lower is better)
Translates to: RTGLCAGLRGSQHPPHPAQASCR*PSSIPS
Trigger: GCTTGGGATGCTAGAGGGTCACCTGCAGGAGGCCTG...AGCTGGGTGGGGTGGGTGTTGAGACCCCCTCAGACCAGCACAGAGACCTGTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR GCA 90 bp TGCAGGCTGCATGCAGCTGTCCAGCCTCCATGTGTGACTCCAGCTCTACCCCATGGGTCGGCTAGTCAGTaGCATGCCCGGGAGCCCCGA +
Preference number: 4 (lower is better)
Translates to: CRLHAAVQPPCVTPALPHGSASQ*HAREPR
Trigger: TCGGGGCTCCCGGGCATGGCACTGACTAGCCGACCC...ATGGGGTAGAGCTGGAGTCACACATGGAGGCTGGACAGCTGCATGCAGCCTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000342272.3
CDS-3UTR GCA 90 bp CCAGCCAGAGGATCCATGGGGTCTCCCCTCGTCTATTGGTCCAGAAGGGAAGCTGGGTCGGCTAGTCAGTaGCATGCCCGGGAGCCCCGA +
Preference number: 4 (lower is better)
Translates to: PARGSMGSPLVYWSRREAGSASQ*HAREPR
Trigger: TCGGGGCTCCCGGGCATGGCACTGACTAGCCGACCC...AGCTTCCCTTCTGGACCAATAGACGAGGGGAGACCCCATGGATCCTCTGGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CCA 90 bp GGGACAGGAGCAGATCAGGAAGCTCAAGAGACCAGGGCGCTTCTCTCTGGGCTCCGTAGCGGAGGCCACTaGAGCGTTCGCTCACGCCGA +
Preference number: 4 (lower is better)
Translates to: GTGADQEAQETRALLSGLRSGGH*SVRSRR
Trigger: TCGGCGTGAGCGAACGCTCCAGTGGCCTCCGCTACG...GAGCCCAGAGAGAAGCGCCCTGGTCTCTTGAGCTTCCTGATCTGCTCCTGTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CCA 90 bp GGGACAGGAGCAGATCAGGAAGCTCAAGAGACCAGGGCGCTTCTCTCTGGGCTCGCAATCTCGGCCTTCTaGCGCGCGATAGCAGCGGCG +
Preference number: 4 (lower is better)
Translates to: GTGADQEAQETRALLSGLAISAF*RAIAAA
Trigger: CGCCGCTGCTATCGCGCGCCAGAAGGCCGAGATTGC...GAGCCCAGAGAGAAGCGCCCTGGTCTCTTGAGCTTCCTGATCTGCTCCTGTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CCA 90 bp CCAGCCAGAGGATCCATGGGGTCTCCCCTCGTCTATTGGTCCAGAAGGGAAGCTGCCGTTCCAGGCGCCTaGGCTCAGCAGGCCGTCCTT +
Preference number: 4 (lower is better)
Translates to: PARGSMGSPLVYWSRREAAVPGA*AQQAVL
Trigger: AAGGACGGCCTGCTGAGCCCAGGCGCCTGGAACGGC...AGCTTCCCTTCTGGACCAATAGACGAGGGGAGACCCCATGGATCCTCTGGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CCA 90 bp AGCCAGGCTCCTGAGGACAGGGTGTGCCTGAACTCGAGCCTACTGTTGGTTGAGGGGGCTCGGGCGGCGTaGTGCGCACAGCATAGCTGT +
Preference number: 4 (lower is better)
Translates to: SQAPEDRVCLNSSLLLVEGARAA*CAQHSC
Trigger: ACAGCTATGCTGTGCGCACCACGCCGCCCGAGCCCC...CTCAACCAACAGTAGGCTCGAGTTCAGGCACACCCTGTCCTCAGGAGCCTGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CCA 90 bp GAAGGAGCCCAGGACATTCCATTCCTCTTGGCACCACCACCGCCACCCAGCACACAGTCTTGCGGGCCTTaGCCCTGGGCTCGGCTTTGG +
Preference number: 4 (lower is better)
Translates to: EGAQDIPFLLAPPPPPSTQSCGP*PWARLW
Trigger: CCAAAGCCGAGCCCAGGGCCAAGGCCCGCAAGACTG...TGTGCTGGGTGGCGGTGGTGGTGCCAAGAGGAATGGAATGTCCTGGGCTCCTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CCA 90 bp GAAGGAGCCCAGGACATTCCATTCCTCTTGGCACCACCACCGCCACCCAGCACATCTTGGCCCCCGCCTTaGTCAGCCCTCGAGCCTCAG +
Preference number: 4 (lower is better)
Translates to: EGAQDIPFLLAPPPPPSTSWPPP*SALEPQ
Trigger: CTGAGGCTCGAGGGCTGACCAAGGCGGGGGCCAAGA...TGTGCTGGGTGGCGGTGGTGGTGCCAAGAGGAATGGAATGTCCTGGGCTCCTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CCA 90 bp GAAGGAGCCCAGGACATTCCATTCCTCTTGGCACCACCACCGCCACCCAGCACACCCCTGAGCTTTCGGTaGGCCCTGATGGGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: EGAQDIPFLLAPPPPPSTPLSFR*ALMGEE
Trigger: CTCCTCCCCCATCAGGGCCCACCGAAAGCTCAGGGG...TGTGCTGGGTGGCGGTGGTGGTGCCAAGAGGAATGGAATGTCCTGGGCTCCTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR TCA 90 bp GAAGGAGCCCAGGACATTCCATTCCTCTTGGCACCACCACCGCCACCCAGCACATGCAGAGGGCGTGGGTaGTGCCTGCAACACTCCTCC +
Preference number: 4 (lower is better)
Translates to: EGAQDIPFLLAPPPPPSTCRGRG*CLQHSS
Trigger: GGAGGAGTGTTGCAGGCATCACCCACGCCCTCTGCA...TGTGCTGGGTGGCGGTGGTGGTGCCAAGAGGAATGGAATGTCCTGGGCTCCTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR GCA 90 bp AGCCAGGCTCCTGAGGACAGGGTGTGCCTGAACTCGAGCCTACTGTTGGTTGAGCGTTGCTGTGCTCGCTaGGCAGGGACGACAGCGACG +
Preference number: 4 (lower is better)
Translates to: SQAPEDRVCLNSSLLLVERCCAR*AGTTAT
Trigger: CGTCGCTGTCGTCCCTGCGCAGCGAGCACAGCAACG...CTCAACCAACAGTAGGCTCGAGTTCAGGCACACCCTGTCCTCAGGAGCCTGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR GCA 90 bp GGCCCTGATGGGGGAGGAGACAAGCCATTTCACAGGGCATCACAGGAGATTTCTCGCCTCTGCCGCCAGTaGGGCCTCCTTCCGCGCCTT +
Preference number: 4 (lower is better)
Translates to: GPDGGGDKPFHRASQEISRLCRQ*GLLPRL
Trigger: AAGGCGCGGAAGGAGGCCGCACTGGCGGCAGAGGCG...AGAAATCTCCTGTGATGCCCTGTGAAATGGCTTGTCTCCTCCCCCATCAGGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CCA 90 bp CCAGCCAGAGGATCCATGGGGTCTCCCCTCGTCTATTGGTCCAGAAGGGAAGCTATAGCAGCGGCGCGCTaGGCACCCTCCACACTGTGC +
Preference number: 4 (lower is better)
Translates to: PARGSMGSPLVYWSRREAIAAAR*APSTLC
Trigger: GCACAGTGTGGAGGGTGCCCAGCGCGCCGCTGCTAT...AGCTTCCCTTCTGGACCAATAGACGAGGGGAGACCCCATGGATCCTCTGGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CCA 90 bp CTAGCATCCCAAGCACACGGGAAACCCCAAATGCAATCCCAGTCTCAGACACACTGGCCATGCGCTCGGTaGCTGGACGCGCGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: LASQAHGKPQMQSQSQTHWPCAR*LDARGC
Trigger: GCAGCCCCGCGCGTCCAGCCACCGAGCGCATGGCCA...GTGTGTCTGAGACTGGGATTGCATTTGGGGTTTCCCGTGTGCTTGGGATGCTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CCA 90 bp CCAGCCAGAGGATCCATGGGGTCTCCCCTCGTCTATTGGTCCAGAAGGGAAGCTACCGGCCAACTGGGCTaGCTGCCCACCTGCTTTCCC +
Preference number: 4 (lower is better)
Translates to: PARGSMGSPLVYWSRREATGQLG*LPTCFP
Trigger: GGGAAAGCAGGTGGGCAGCCAGCCCAGTTGGCCGGT...AGCTTCCCTTCTGGACCAATAGACGAGGGGAGACCCCATGGATCCTCTGGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR TCA 90 bp AGGACAGGTCTCTGTGCTGGTCTGAGGGGGTCTCAACACCCACCCCACCCAGCTTCTCATCATAGCCCCTaGCAACCTCCCCGTCCTCCA +
Preference number: 4 (lower is better)
Translates to: RTGLCAGLRGSQHPPHPASHHSP*QPPRPP
Trigger: TGGAGGACGGGGAGGTTGTCAGGGGCTATGATGAGA...AGCTGGGTGGGGTGGGTGTTGAGACCCCCTCAGACCAGCACAGAGACCTGTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR TCA 90 bp GGCCCTGATGGGGGAGGAGACAAGCCATTTCACAGGGCATCACAGGAGATTTCTCTCGGACGGAGTGACTaGCCGGCTGCCCTCACCGCT +
Preference number: 4 (lower is better)
Translates to: GPDGGGDKPFHRASQEISLGRSD*PAALTA
Trigger: AGCGGTGAGGGCAGCCGGTCAGTCACTCCGTCCGAG...AGAAATCTCCTGTGATGCCCTGTGAAATGGCTTGTCTCCTCCCCCATCAGGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR TCA 90 bp GGGACAGGAGCAGATCAGGAAGCTCAAGAGACCAGGGCGCTTCTCTCTGGGCTCAGCCCCCACTCAAACTaGAGCCCTTCAGCTGCCCCT +
Preference number: 4 (lower is better)
Translates to: GTGADQEAQETRALLSGLSPHSN*SPSAAP
Trigger: AGGGGCAGCTGAAGGGCTTCAGTTTGAGTGGGGGCT...GAGCCCAGAGAGAAGCGCCCTGGTCTCTTGAGCTTCCTGATCTGCTCCTGTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR GCA 90 bp GAAGGAGCCCAGGACATTCCATTCCTCTTGGCACCACCACCGCCACCCAGCACAGCCCCTTGGTCTCTATaGCCAGCCCATGCCGTTTGC +
Preference number: 4 (lower is better)
Translates to: EGAQDIPFLLAPPPPPSTAPWSL*PAHAVC
Trigger: GCAAACGGCATGGGCTGGGCATAGAGACCAAGGGGC...TGTGCTGGGTGGCGGTGGTGGTGCCAAGAGGAATGGAATGTCCTGGGCTCCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR GCA 90 bp GGGAAGCTAACTGGACTGGTGGGAGGAGACAGAGCACTGTGTTCTGGGATATTCGGGACGACAGCGACGTaGGCAGCGGCGAGCGCACCA +
Preference number: 4 (lower is better)
Translates to: GKLTGLVGGDRALCSGIFGTTAT*AAASAP
Trigger: TGGTGCGCTCGCCGCTGCGCACGTCGCTGTCGTCCC...GAATATCCCAGAACACAGTGCTCTGTCTCCTCCCACCAGTCCAGTTAGCTTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR GCA 90 bp GGGACAGGAGCAGATCAGGAAGCTCAAGAGACCAGGGCGCTTCTCTCTGGGCTCGACCCACAAGCACATTaGAGCCCAGCCAGAGCCCGT +
Preference number: 4 (lower is better)
Translates to: GTGADQEAQETRALLSGLDPQAH*SPARAR
Trigger: ACGGGCTCTGGCTGGGCTGCAATGTGCTTGTGGGTC...GAGCCCAGAGAGAAGCGCCCTGGTCTCTTGAGCTTCCTGATCTGCTCCTGTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR GCA 90 bp AGGACAGGTCTCTGTGCTGGTCTGAGGGGGTCTCAACACCCACCCCACCCAGCTGCCCTGGAAGAGTCCTaGAGAGACCTCAAGGCAGTG +
Preference number: 4 (lower is better)
Translates to: RTGLCAGLRGSQHPPHPAALEES*RDLKAV
Trigger: CACTGCCTTGAGGTCTCTGCAGGACTCTTCCAGGGC...AGCTGGGTGGGGTGGGTGTTGAGACCCCCTCAGACCAGCACAGAGACCTGTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CCA 90 bp CTGCTCTGTGGATTCTGCCAGGCACAGATCTGTGCCAGGCAACTCTCATCAGTTCCCCGTCCTCCAGCGTaGGTGCAGAGGGCGTGGGTG +
Preference number: 4 (lower is better)
Translates to: LLCGFCQAQICARQLSSVPRPPA*VQRAWV
Trigger: CACCCACGCCCTCTGCACCCACGCTGGAGGACGGGG...AACTGATGAGAGTTGCCTGGCACAGATCTGTGCCTGGCAGAATCCACAGAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342272.3
CDS-3UTR CCA 90 bp GGGAAGCTAACTGGACTGGTGGGAGGAGACAGAGCACTGTGTTCTGGGATATTCCCCCGTCCTCCAGCGTaGGTGCAGAGGGCGTGGGTG +
Preference number: 4 (lower is better)
Translates to: GKLTGLVGGDRALCSGIFPRPPA*VQRAWV
Trigger: CACCCACGCCCTCTGCACCCACGCTGGAGGACGGGG...GAATATCCCAGAACACAGTGCTCTGTCTCCTCCCACCAGTCCAGTTAGCTTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CCA 90 bp AGCCAGGCTCCTGAGGACAGGGTGTGCCTGAACTCGAGCCTACTGTTGGTTGAGGCAATGTTGGACTCCTaGTTGGCAGCCAGGGCGGCC +
Preference number: 4 (lower is better)
Translates to: SQAPEDRVCLNSSLLLVEAMLDS*LAARAA
Trigger: GGCCGCCCTGGCTGCCAACCAGGAGTCCAACATTGC...CTCAACCAACAGTAGGCTCGAGTTCAGGCACACCCTGTCCTCAGGAGCCTGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CCA 90 bp GAGAGAGTGAGGGAGTGGGAACTGGCCTCCATAGGCATAGTCAGAGTTTTGCACTCAGCAGGCCGTCCTTaGACACCCCGGGCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: ERVREWELASIGIVRVLHSAGRP*TPRAWA
Trigger: GGCCCAGGCCCGGGGTGTCCAAGGACGGCCTGCTGA...GTGCAAAACTCTGACTATGCCTATGGAGGCCAGTTCCCACTCCCTCACTCTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CCA 90 bp GGGACAGGAGCAGATCAGGAAGCTCAAGAGACCAGGGCGCTTCTCTCTGGGCTCGGGGTGAATGTGAACTaGACCACGGGGCTCCAGGTC +
Preference number: 4 (lower is better)
Translates to: GTGADQEAQETRALLSGLGVNVN*TTGLQV
Trigger: GACCTGGAGCCCCGTGGTCCAGTTCACATTCACCCC...GAGCCCAGAGAGAAGCGCCCTGGTCTCTTGAGCTTCCTGATCTGCTCCTGTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CCA 90 bp GGGACAGGAGCAGATCAGGAAGCTCAAGAGACCAGGGCGCTTCTCTCTGGGCTCTTGGCCTGGGAGCTTTaGCAGGCACAGGCTTGTCCC +
Preference number: 4 (lower is better)
Translates to: GTGADQEAQETRALLSGLLAWEL*QAQACP
Trigger: GGGACAAGCCTGTGCCTGCCAAAGCTCCCAGGCCAA...GAGCCCAGAGAGAAGCGCCCTGGTCTCTTGAGCTTCCTGATCTGCTCCTGTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CCA 90 bp GGGACAGGAGCAGATCAGGAAGCTCAAGAGACCAGGGCGCTTCTCTCTGGGCTCCCCCCAAACTTGGCCTaGGAGCTTTGGCAGGCACAG +
Preference number: 4 (lower is better)
Translates to: GTGADQEAQETRALLSGLPPNLA*ELWQAQ
Trigger: CTGTGCCTGCCAAAGCTCCCAGGCCAAGTTTGGGGG...GAGCCCAGAGAGAAGCGCCCTGGTCTCTTGAGCTTCCTGATCTGCTCCTGTCCC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR TCA 90 bp CTGTGCTCTCCTGGGGTCTCCATAGAATGCCCAGAAGCTGCCAAGACAGCAGCTTGCAGAGGGCGTGGGTaGTGCCTGCAACACTCCTCC +
Preference number: 4 (lower is better)
Translates to: LCSPGVSIECPEAAKTAACRGRG*CLQHSS
Trigger: GGAGGAGTGTTGCAGGCATCACCCACGCCCTCTGCA...AGCTGCTGTCTTGGCAGCTTCTGGGCATTCTATGGAGACCCCAGGAGAGCACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342272.3
CDS-3UTR GCA 90 bp AGCCAGGCTCCTGAGGACAGGGTGTGCCTGAACTCGAGCCTACTGTTGGTTGAGCCAGCCCATGCCGTTTaGCCTGGCTCCAGTATCCCT +
Preference number: 4 (lower is better)
Translates to: SQAPEDRVCLNSSLLLVEPAHAV*PGSSIP
Trigger: AGGGATACTGGAGCCAGGGCAAACGGCATGGGCTGG...CTCAACCAACAGTAGGCTCGAGTTCAGGCACACCCTGTCCTCAGGAGCCTGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR GCA 90 bp TGCAGGCTGCATGCAGCTGTCCAGCCTCCATGTGTGACTCCAGCTCTACCCCATGCCCCTTGGTCTCTATaGCCAGCCCATGCCGTTTGC +
Preference number: 4 (lower is better)
Translates to: CRLHAAVQPPCVTPALPHAPWSL*PAHAVC
Trigger: GCAAACGGCATGGGCTGGGCATAGAGACCAAGGGGC...ATGGGGTAGAGCTGGAGTCACACATGGAGGCTGGACAGCTGCATGCAGCCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000342272.3
CDS-3UTR GCA 90 bp AGGACAGGTCTCTGTGCTGGTCTGAGGGGGTCTCAACACCCACCCCACCCAGCTCATACTTGGCACCGCTaGTTGAGCTCTGCCGGATTC +
Preference number: 4 (lower is better)
Translates to: RTGLCAGLRGSQHPPHPAHTWHR*LSSAGF
Trigger: GAATCCGGCAGAGCTCAAGCAGCGGTGCCAAGTATG...AGCTGGGTGGGGTGGGTGTTGAGACCCCCTCAGACCAGCACAGAGACCTGTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR GCA 90 bp GCTGTGCTCTCCTGGGGTCTCCATAGAATGCCCAGAAGCTGCCAAGACAGCAGCCCTCCAGGCACAAGGTaGTCATTCCTGGCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: AVLSWGLHRMPRSCQDSSPPGTR*SFLAWS
Trigger: GCTCCAGGCCAGGAATGAGCACCTTGTGCCTGGAGG...GCTGCTGTCTTGGCAGCTTCTGGGCATTCTATGGAGACCCCAGGAGAGCACAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342272.3
CDS-3UTR GCA 90 bp CTGTGCTCTCCTGGGGTCTCCATAGAATGCCCAGAAGCTGCCAAGACAGCAGCTGTGTCCCCTGCAGGCTaGATGCAGCTGTCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: LCSPGVSIECPEAAKTAAVSPAG*MQLSSL
Trigger: GAGGCTGGACAGCTGCATGCAGCCTGCAGGGGACAC...AGCTGCTGTCTTGGCAGCTTCTGGGCATTCTATGGAGACCCCAGGAGAGCACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000342272.3
CDS-3UTR GCA 90 bp GAGAGAGTGAGGGAGTGGGAACTGGCCTCCATAGGCATAGTCAGAGTTTTGCACGGCGCAGGCGGTGCCTaGAGAGCCTCGATGGCCATG +
Preference number: 4 (lower is better)
Translates to: ERVREWELASIGIVRVLHGAGGA*RASMAM
Trigger: CATGGCCATCGAGGCTCTGCAGGCACCGCCTGCGCC...GTGCAAAACTCTGACTATGCCTATGGAGGCCAGTTCCCACTCCCTCACTCTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR GCA 90 bp AGCCAGGCTCCTGAGGACAGGGTGTGCCTGAACTCGAGCCTACTGTTGGTTGAGGGAGGGAGTGCAGGGTaGAGACTGCACAAGGACAGG +
Preference number: 4 (lower is better)
Translates to: SQAPEDRVCLNSSLLLVEGGSAG*RLHKDR
Trigger: CCTGTCCTTGTGCAGTCTGCACCCTGCACTCCCTCC...CTCAACCAACAGTAGGCTCGAGTTCAGGCACACCCTGTCCTCAGGAGCCTGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR GCA 90 bp GAAGGAGCCCAGGACATTCCATTCCTCTTGGCACCACCACCGCCACCCAGCACAAGGCAAGGGAGGGAGTaGAGGGTGCAGACTGCACAA +
Preference number: 4 (lower is better)
Translates to: EGAQDIPFLLAPPPPPSTRQGRE*RVQTAQ
Trigger: TTGTGCAGTCTGCACCCTGCACTCCCTCCCTTGCCT...TGTGCTGGGTGGCGGTGGTGGTGCCAAGAGGAATGGAATGTCCTGGGCTCCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR GCA 90 bp AGGACAGGTCTCTGTGCTGGTCTGAGGGGGTCTCAACACCCACCCCACCCAGCTTTGATCTTGGCTCACTaGAACCTCCGCCTCCAGGGT +
Preference number: 4 (lower is better)
Translates to: RTGLCAGLRGSQHPPHPALILAH*NLRLQG
Trigger: ACCCTGGAGGCGGAGGTTGCAGTGAGCCAAGATCAA...AGCTGGGTGGGGTGGGTGTTGAGACCCCCTCAGACCAGCACAGAGACCTGTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR GCA 90 bp AGGACAGGTCTCTGTGCTGGTCTGAGGGGGTCTCAACACCCACCCCACCCAGCTGTCATCATCTGGGCCTaGATCTCTCCCAGAACAGCC +
Preference number: 4 (lower is better)
Translates to: RTGLCAGLRGSQHPPHPAVIIWA*ISPRTA
Trigger: GGCTGTTCTGGGAGAGATGCAGGCCCAGATGATGAC...AGCTGGGTGGGGTGGGTGTTGAGACCCCCTCAGACCAGCACAGAGACCTGTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CCA 90 bp AGCCAGGCTCCTGAGGACAGGGTGTGCCTGAACTCGAGCCTACTGTTGGTTGAGTGGGTGCAGAGGGCGTaGGTGATGCCTGCAACACTC +
Preference number: 4 (lower is better)
Translates to: SQAPEDRVCLNSSLLLVEWVQRA*VMPATL
Trigger: GAGTGTTGCAGGCATCACCCACGCCCTCTGCACCCA...CTCAACCAACAGTAGGCTCGAGTTCAGGCACACCCTGTCCTCAGGAGCCTGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CCA 90 bp CTAGCATCCCAAGCACACGGGAAACCCCAAATGCAATCCCAGTCTCAGACACACGGAAATTCCCCTCGGTaGCAGCCCCCGCCGGAGGCT +
Preference number: 4 (lower is better)
Translates to: LASQAHGKPQMQSQSQTHGNSPR*QPPPEA
Trigger: AGCCTCCGGCGGGGGCTGCCACCGAGGGGAATTTCC...GTGTGTCTGAGACTGGGATTGCATTTGGGGTTTCCCGTGTGCTTGGGATGCTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CCA 90 bp GAGAGAGTGAGGGAGTGGGAACTGGCCTCCATAGGCATAGTCAGAGTTTTGCACCTGACACGGCTGCGCTaGCTACCCACGGACGTGCGC +
Preference number: 4 (lower is better)
Translates to: ERVREWELASIGIVRVLHLTRLR*LPTDVR
Trigger: GCGCACGTCCGTGGGTAGCCAGCGCAGCCGTGTCAG...GTGCAAAACTCTGACTATGCCTATGGAGGCCAGTTCCCACTCCCTCACTCTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CCA 90 bp CCAGCCAGAGGATCCATGGGGTCTCCCCTCGTCTATTGGTCCAGAAGGGAAGCTCCTCAGCTTTGGCCTTaGCGTGGCTTGTCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: PARGSMGSPLVYWSRREAPQLWP*RGLSWR
Trigger: CCTCCAGGACAAGCCACGCCAAGGCCAAAGCTGAGG...AGCTTCCCTTCTGGACCAATAGACGAGGGGAGACCCCATGGATCCTCTGGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CCA 90 bp GGGAAGCTAACTGGACTGGTGGGAGGAGACAGAGCACTGTGTTCTGGGATATTCGCTTGGGCTCCAGCTTaGCGGGGGTCTCGCGTGCAG +
Preference number: 4 (lower is better)
Translates to: GKLTGLVGGDRALCSGIFAWAPA*RGSRVQ
Trigger: CTGCACGCGAGACCCCCGCCAAGCTGGAGCCCAAGC...GAATATCCCAGAACACAGTGCTCTGTCTCCTCCCACCAGTCCAGTTAGCTTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR CAA 72 bp CCTGAGGACAGGGTGTGCCTGAACTCGAGCCTACTGTaGGTTGAGGGACCTTCTTCTCCAACCCCCTCGCTG +
Preference number: 4 (lower is better)
Translates to: PEDRVCLNSSLL*VEGPSSPTPSL
Trigger: CAGCGAGGGGGTTGGAGAAGAAGGTCCCTCAACCAACAGTAGGCTCGAGTTCAGGCACACCCTGTCCTCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR TCA 90 bp GCTGTGCTCTCCTGGGGTCTCCATAGAATGCCCAGAAGCTGCCAAGACAGCAGCTTCCGTAGCGTCCCTTaGAGCCATGTGTCCACTCGC +
Preference number: 4 (lower is better)
Translates to: AVLSWGLHRMPRSCQDSSFRSVP*SHVSTR
Trigger: GCGAGTGGACACATGGCTTCAAGGGACGCTACGGAA...GCTGCTGTCTTGGCAGCTTCTGGGCATTCTATGGAGACCCCAGGAGAGCACAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342272.3
CDS-3UTR TCA 90 bp GGCCCTGATGGGGGAGGAGACAAGCCATTTCACAGGGCATCACAGGAGATTTCTAGCAGCCGGCGCTTCTaGTATTCCGGACCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: GPDGGGDKPFHRASQEISSSRRF*YSGPGW
Trigger: CCAGCCAGGTCCGGAATATCAGAAGCGCCGGCTGCT...AGAAATCTCCTGTGATGCCCTGTGAAATGGCTTGTCTCCTCCCCCATCAGGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR TCA 90 bp CCAGCCAGAGGATCCATGGGGTCTCCCCTCGTCTATTGGTCCAGAAGGGAAGCTCAGACTGCAGCATCCTaGACCCCAAACCCAACCCCA +
Preference number: 4 (lower is better)
Translates to: PARGSMGSPLVYWSRREAQTAAS*TPNPTP
Trigger: TGGGGTTGGGTTTGGGGTTCAGGATGCTGCAGTCTG...AGCTTCCCTTCTGGACCAATAGACGAGGGGAGACCCCATGGATCCTCTGGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR TCA 90 bp CCAGCCAGAGGATCCATGGGGTCTCCCCTCGTCTATTGGTCCAGAAGGGAAGCTCACAGAAAGAGGGAGTaGGGGAGCACATGGCCCATC +
Preference number: 4 (lower is better)
Translates to: PARGSMGSPLVYWSRREAHRKRE*GSTWPI
Trigger: GATGGGCCATGTGCTCCCTCACTCCCTCTTTCTGTG...AGCTTCCCTTCTGGACCAATAGACGAGGGGAGACCCCATGGATCCTCTGGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR TCA 90 bp AGGACAGGTCTCTGTGCTGGTCTGAGGGGGTCTCAACACCCACCCCACCCAGCTGCACACCATCCAAAGTaGGTTCAATACAGCCACCCC +
Preference number: 4 (lower is better)
Translates to: RTGLCAGLRGSQHPPHPAAHHPK*VQYSHP
Trigger: GGGGTGGCTGTATTGAACTCACTTTGGATGGTGTGC...AGCTGGGTGGGGTGGGTGTTGAGACCCCCTCAGACCAGCACAGAGACCTGTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR TCA 90 bp GGGACAGGAGCAGATCAGGAAGCTCAAGAGACCAGGGCGCTTCTCTCTGGGCTCTATGTGATGTCAGCCTaGCCTTTGGGTGTGGGGAGG +
Preference number: 4 (lower is better)
Translates to: GTGADQEAQETRALLSGLYVMSA*PLGVGR
Trigger: CCTCCCCACACCCAAAGGTCAGGCTGACATCACATA...GAGCCCAGAGAGAAGCGCCCTGGTCTCTTGAGCTTCCTGATCTGCTCCTGTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR GCA 90 bp GAGAGAGTGAGGGAGTGGGAACTGGCCTCCATAGGCATAGTCAGAGTTTTGCACGGCCCTTGGGGCCTGTaGACAGTCCATGCCCATGGG +
Preference number: 4 (lower is better)
Translates to: ERVREWELASIGIVRVLHGPWGL*TVHAHG
Trigger: CCCATGGGCATGGACTGTGCACAGGCCCCAAGGGCC...GTGCAAAACTCTGACTATGCCTATGGAGGCCAGTTCCCACTCCCTCACTCTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR GCA 90 bp CCTCCAGGCACAAGGTGCTCATTCCTGGCCTGGAGCAGGGGTCACTCTGGAGTTCATACTTGGCACCGCTaGTTGAGCTCTGCCGGATTC +
Preference number: 4 (lower is better)
Translates to: PPGTRCSFLAWSRGHSGVHTWHR*LSSAGF
Trigger: GAATCCGGCAGAGCTCAAGCAGCGGTGCCAAGTATG...AACTCCAGAGTGACCCCTGCTCCAGGCCAGGAATGAGCACCTTGTGCCTGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342272.3
CDS-3UTR GCA 90 bp GCTGTGCTCTCCTGGGGTCTCCATAGAATGCCCAGAAGCTGCCAAGACAGCAGCATCCAGAGTGTCCCCTaGAGGCTGCATGCAGCTGTC +
Preference number: 4 (lower is better)
Translates to: AVLSWGLHRMPRSCQDSSIQSVP*RLHAAV
Trigger: GACAGCTGCATGCAGCCTGCAGGGGACACTCTGGAT...GCTGCTGTCTTGGCAGCTTCTGGGCATTCTATGGAGACCCCAGGAGAGCACAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000342272.3
CDS-3UTR GCA 90 bp GACCCATCAGACTTCCTAGAGCTGCCTGTGGTCAAGATTAGAAGAGGAGGCATCCGTCGGGCAGCGTGGTaGAGCCATAGCCGTGGCGCA +
Preference number: 4 (lower is better)
Translates to: DPSDFLELPVVKIRRGGIRRAAW*SHSRGA
Trigger: TGCGCCACGGCTATGGCTGCACCACGCTGCCCGACG...GATGCCTCCTCTTCTAATCTTGACCACAGGCAGCTCTAGGAAGTCTGATGGGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR GCA 90 bp AGAGTCCTGCAGAGACCTCAAGGCAGTGGGCCAGCATTGCTTTTAAGTTCATGCGAGCCTCGATGGCCATaGGCTCGGTGGCTGGACGCG +
Preference number: 4 (lower is better)
Translates to: RVLQRPQGSGPALLLSSCEPRWP*ARWLDA
Trigger: CGCGTCCAGCCACCGAGCGCATGGCCATCGAGGCTC...GCATGAACTTAAAAGCAATGCTGGCCCACTGCCTTGAGGTCTCTGCAGGACTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CCA 90 bp AGGACAGGTCTCTGTGCTGGTCTGAGGGGGTCTCAACACCCACCCCACCCAGCTTTGGTGAACTGGCCTTaGTACGTCCCTCCATCAGCA +
Preference number: 4 (lower is better)
Translates to: RTGLCAGLRGSQHPPHPALVNWP*YVPPSA
Trigger: TGCTGATGGAGGGACGTACCAAGGCCAGTTCACCAA...AGCTGGGTGGGGTGGGTGTTGAGACCCCCTCAGACCAGCACAGAGACCTGTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CCA 90 bp GAAGGAGCCCAGGACATTCCATTCCTCTTGGCACCACCACCGCCACCCAGCACACTGATATTCCGGACCTaGCTGGTAGAAGTCCGGAGC +
Preference number: 4 (lower is better)
Translates to: EGAQDIPFLLAPPPPPSTLIFRT*LVEVRS
Trigger: GCTCCGGACTTCTACCAGCCAGGTCCGGAATATCAG...TGTGCTGGGTGGCGGTGGTGGTGCCAAGAGGAATGGAATGTCCTGGGCTCCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CCA 90 bp CTAGCATCCCAAGCACACGGGAAACCCCAAATGCAATCCCAGTCTCAGACACACCCTGCAGAGCCTCGATaGCCATGCGCTCGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: LASQAHGKPQMQSQSQTHPAEPR*PCARWL
Trigger: CAGCCACCGAGCGCATGGCCATCGAGGCTCTGCAGG...GTGTGTCTGAGACTGGGATTGCATTTGGGGTTTCCCGTGTGCTTGGGATGCTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CCA 90 bp CTAGCATCCCAAGCACACGGGAAACCCCAAATGCAATCCCAGTCTCAGACACACTCCGCGCCTTCTTCTTaGCCCCCGCCTTGGTCAGCC +
Preference number: 4 (lower is better)
Translates to: LASQAHGKPQMQSQSQTHSAPSS*PPPWSA
Trigger: GGCTGACCAAGGCGGGGGCCAAGAAGAAGGCGCGGA...GTGTGTCTGAGACTGGGATTGCATTTGGGGTTTCCCGTGTGCTTGGGATGCTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CCA 90 bp GGGACAGGAGCAGATCAGGAAGCTCAAGAGACCAGGGCGCTTCTCTCTGGGCTCTCCCTTTGGGGTCCCTaGGATCCTCTACCAAAACGC +
Preference number: 4 (lower is better)
Translates to: GTGADQEAQETRALLSGLSLWGP*DPLPKR
Trigger: GCGTTTTGGTAGAGGATCCCAGGGACCCCAAAGGGA...GAGCCCAGAGAGAAGCGCCCTGGTCTCTTGAGCTTCCTGATCTGCTCCTGTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CCA 90 bp AGGACAGGTCTCTGTGCTGGTCTGAGGGGGTCTCAACACCCACCCCACCCAGCTAAGCAATCCTTGCTCTaGAGCTCCCACTGGGTTGGA +
Preference number: 4 (lower is better)
Translates to: RTGLCAGLRGSQHPPHPAKQSLL*SSHWVG
Trigger: TCCAACCCAGTGGGAGCTCCAGAGCAAGGATTGCTT...AGCTGGGTGGGGTGGGTGTTGAGACCCCCTCAGACCAGCACAGAGACCTGTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR TCA 90 bp GGGACAATGGGGATGGTACTACAGGCTGTACTGTCTTGTCTGTTTACCAAAACCCATTGGCCAGGAGGCTaGGCGCGAAGCCGCCACGCG +
Preference number: 4 (lower is better)
Translates to: GTMGMVLQAVLSCLFTKTHWPGG*ARSRHA
Trigger: CGCGTGGCGGCTTCGCGCTCAGCCTCCTGGCCAATG...GGTTTTGGTAAACAGACAAGACAGTACAGCCTGTAGTACCATCCCCATTGTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR GCA 90 bp GACCCATCAGACTTCCTAGAGCTGCCTGTGGTCAAGATTAGAAGAGGAGGCATCCGTTGTGGCGGTACTTaGCCTCCTCGCGGTGGCCGT +
Preference number: 4 (lower is better)
Translates to: DPSDFLELPVVKIRRGGIRCGGT*PPRGGR
Trigger: ACGGCCACCGCGAGGAGGGCAAGTACCGCCACAACG...GATGCCTCCTCTTCTAATCTTGACCACAGGCAGCTCTAGGAAGTCTGATGGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR GCA 90 bp CCAGCCAGAGGATCCATGGGGTCTCCCCTCGTCTATTGGTCCAGAAGGGAAGCTTTGTTGCTCTTGAGCTaGAGCATGCGGCGCTTGGTG +
Preference number: 4 (lower is better)
Translates to: PARGSMGSPLVYWSRREALLLLS*SMRRLV
Trigger: CACCAAGCGCCGCATGCTGCAGCTCAAGAGCAACAA...AGCTTCCCTTCTGGACCAATAGACGAGGGGAGACCCCATGGATCCTCTGGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR GCA 90 bp GGGACAATGGGGATGGTACTACAGGCTGTACTGTCTTGTCTGTTTACCAAAACCGGGGTCTCACGCTCGTaGAGCTGCGGGCTCTCGCGG +
Preference number: 4 (lower is better)
Translates to: GTMGMVLQAVLSCLFTKTGVSRS*SCGLSR
Trigger: CCGCGAGAGCCCGCAGCTGCACGAGCGTGAGACCCC...GGTTTTGGTAAACAGACAAGACAGTACAGCCTGTAGTACCATCCCCATTGTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR GCA 90 bp GACCCATCAGACTTCCTAGAGCTGCCTGTGGTCAAGATTAGAAGAGGAGGCATCGCTCGGGCGGCGTGGTaGGCACAGCATAGCTGTGGT +
Preference number: 4 (lower is better)
Translates to: DPSDFLELPVVKIRRGGIARAAW*AQHSCG
Trigger: ACCACAGCTATGCTGTGCGCACCACGCCGCCCGAGC...GATGCCTCCTCTTCTAATCTTGACCACAGGCAGCTCTAGGAAGTCTGATGGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR GCA 90 bp CCAGCCAGAGGATCCATGGGGTCTCCCCTCGTCTATTGGTCCAGAAGGGAAGCTAAGGACAGGTCTCTGTaGTGGTCTGAGGGGGTCTCA +
Preference number: 4 (lower is better)
Translates to: PARGSMGSPLVYWSRREAKDRSL*WSEGVS
Trigger: TGAGACCCCCTCAGACCAGCACAGAGACCTGTCCTT...AGCTTCCCTTCTGGACCAATAGACGAGGGGAGACCCCATGGATCCTCTGGCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR GCA 90 bp AGGACAGGTCTCTGTGCTGGTCTGAGGGGGTCTCAACACCCACCCCACCCAGCTACGGGAAACCCCAAATaGAATCCCAGTCTCAGACAC +
Preference number: 4 (lower is better)
Translates to: RTGLCAGLRGSQHPPHPATGNPK*NPSLRH
Trigger: GTGTCTGAGACTGGGATTGCATTTGGGGTTTCCCGT...AGCTGGGTGGGGTGGGTGTTGAGACCCCCTCAGACCAGCACAGAGACCTGTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR GCA 90 bp GAAGGAGCCCAGGACATTCCATTCCTCTTGGCACCACCACCGCCACCCAGCACACTTGAGAAGCTCAGATaGAGATGCAGAGCTGTGGGC +
Preference number: 4 (lower is better)
Translates to: EGAQDIPFLLAPPPPPSTLEKLR*RCRAVG
Trigger: GCCCACAGCTCTGCATCTGCATCTGAGCTTCTCAAG...TGTGCTGGGTGGCGGTGGTGGTGCCAAGAGGAATGGAATGTCCTGGGCTCCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR GCA 90 bp CCAGCCAGAGGATCCATGGGGTCTCCCCTCGTCTATTGGTCCAGAAGGGAAGCTTTCCTGCCACCAACTTaGTGTGTGCGTGACCTTGGG +
Preference number: 4 (lower is better)
Translates to: PARGSMGSPLVYWSRREAFLPPT*CVRDLG
Trigger: CCCAAGGTCACGCACACAGCAAGTTGGTGGCAGGAA...AGCTTCCCTTCTGGACCAATAGACGAGGGGAGACCCCATGGATCCTCTGGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CCA 90 bp TGCAGGCTGCATGCAGCTGTCCAGCCTCCATGTGTGACTCCAGCTCTACCCCATAGGTGCCCTCATACTTaGCACCGCTGCTTGAGCTCT +
Preference number: 4 (lower is better)
Translates to: CRLHAAVQPPCVTPALPHRCPHT*HRCLSS
Trigger: AGAGCTCAAGCAGCGGTGCCAAGTATGAGGGCACCT...ATGGGGTAGAGCTGGAGTCACACATGGAGGCTGGACAGCTGCATGCAGCCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342272.3
CDS-3UTR CCA 90 bp GGGTCTGCTGTGCTCTCCTGGGGTCTCCATAGAATGCCCAGAAGCTGCCAAGACTCTGCTGTGCTCTCCTaGGGTCTCCATAGAATGCCC +
Preference number: 4 (lower is better)
Translates to: GSAVLSWGLHRMPRSCQDSAVLS*GLHRMP
Trigger: GGGCATTCTATGGAGACCCCAGGAGAGCACAGCAGA...GTCTTGGCAGCTTCTGGGCATTCTATGGAGACCCCAGGAGAGCACAGCAGACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342272.3
CDS-3UTR CCA 90 bp CTGTGCTCTCCTGGGGTCTCCATAGAATGCCCAGAAGCTGCCAAGACAGCAGCTTGCTCATTCCTGGCCTaGAGCAGGGGTCACTCTGGA +
Preference number: 4 (lower is better)
Translates to: LCSPGVSIECPEAAKTAACSFLA*SRGHSG
Trigger: TCCAGAGTGACCCCTGCTCCAGGCCAGGAATGAGCA...AGCTGCTGTCTTGGCAGCTTCTGGGCATTCTATGGAGACCCCAGGAGAGCACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000342272.3
CDS-3UTR CCA 90 bp GGCCCTGATGGGGGAGGAGACAAGCCATTTCACAGGGCATCACAGGAGATTTCTCCGGAGCCAGCTCCCTaGCCAAAGTGCGAGCAATGT +
Preference number: 4 (lower is better)
Translates to: GPDGGGDKPFHRASQEISPEPAP*PKCEQC
Trigger: ACATTGCTCGCACTTTGGCCAGGGAGCTGGCTCCGG...AGAAATCTCCTGTGATGCCCTGTGAAATGGCTTGTCTCCTCCCCCATCAGGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CCA 90 bp GGCCCTGATGGGGGAGGAGACAAGCCATTTCACAGGGCATCACAGGAGATTTCTGAGTCCAGTCCTCTTTaGCCACCCTGCCTGGCACTG +
Preference number: 4 (lower is better)
Translates to: GPDGGGDKPFHRASQEISESSPL*PPCLAL
Trigger: CAGTGCCAGGCAGGGTGGCCAAAGAGGACTGGACTC...AGAAATCTCCTGTGATGCCCTGTGAAATGGCTTGTCTCCTCCCCCATCAGGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CCA 90 bp GAGAGAGTGAGGGAGTGGGAACTGGCCTCCATAGGCATAGTCAGAGTTTTGCACGGAAAGGCAAGGGAGTaGAGGAGAGCGGGGGACAGG +
Preference number: 4 (lower is better)
Translates to: ERVREWELASIGIVRVLHGKARE*RRAGDR
Trigger: CCTGTCCCCCGCTCTCCTCCACTCCCTTGCCTTTCC...GTGCAAAACTCTGACTATGCCTATGGAGGCCAGTTCCCACTCCCTCACTCTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CCA 90 bp GGCCCTGATGGGGGAGGAGACAAGCCATTTCACAGGGCATCACAGGAGATTTCTACCAGCCCCCAAACTTaGCCTGGGAGCTTTGGCAGG +
Preference number: 4 (lower is better)
Translates to: GPDGGGDKPFHRASQEISTSPQT*PGSFGR
Trigger: CCTGCCAAAGCTCCCAGGCCAAGTTTGGGGGCTGGT...AGAAATCTCCTGTGATGCCCTGTGAAATGGCTTGTCTCCTCCCCCATCAGGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CCA 90 bp AGCCAGGCTCCTGAGGACAGGGTGTGCCTGAACTCGAGCCTACTGTTGGTTGAGAGCGAAGAAAGTGGCTaGGCTAGCATTGGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: SQAPEDRVCLNSSLLLVESEESG*ASIGGW
Trigger: CCAGCCTCCAATGCTAGCCCAGCCACTTTCTTCGCT...CTCAACCAACAGTAGGCTCGAGTTCAGGCACACCCTGTCCTCAGGAGCCTGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CCA 90 bp GAAGGAGCCCAGGACATTCCATTCCTCTTGGCACCACCACCGCCACCCAGCACATTCATGGTGGGCTCCTaGGACCACAACTCACAGCTT +
Preference number: 4 (lower is better)
Translates to: EGAQDIPFLLAPPPPPSTFMVGS*DHNSQL
Trigger: AAGCTGTGAGTTGTGGTCCCAGGAGCCCACCATGAA...TGTGCTGGGTGGCGGTGGTGGTGCCAAGAGGAATGGAATGTCCTGGGCTCCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR CAA 72 bp ACTGCACCCAGGCTGTACCCAGTTGGAGCCCCAGACTaGCCCCTCTCTTGCCGGGAAATGCTTCTTGACAAG +
Preference number: 4 (lower is better)
Translates to: TAPRLYPVGAPD*PLSCREMLLDK
Trigger: CTTGTCAAGAAGCATTTCCCGGCAAGAGAGGGGCAAGTCTGGGGCTCCAACTGGGTACAGCCTGGGTGCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR TCA 90 bp AGGACAGGTCTCTGTGCTGGTCTGAGGGGGTCTCAACACCCACCCCACCCAGCTGGGAAATGGGAAAGCTaGCCCTATCAGAAGCAAACT +
Preference number: 4 (lower is better)
Translates to: RTGLCAGLRGSQHPPHPAGKWES*PYQKQT
Trigger: AGTTTGCTTCTGATAGGGTCAGCTTTCCCATTTCCC...AGCTGGGTGGGGTGGGTGTTGAGACCCCCTCAGACCAGCACAGAGACCTGTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR TCA 90 bp GAGAGAGTGAGGGAGTGGGAACTGGCCTCCATAGGCATAGTCAGAGTTTTGCACGCTGTGTCCTACCCTTaGGCCAACAGGGGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: ERVREWELASIGIVRVLHAVSYP*ANRGCC
Trigger: ACAGCACCCCCTGTTGGCTCAAGGGTAGGACACAGC...GTGCAAAACTCTGACTATGCCTATGGAGGCCAGTTCCCACTCCCTCACTCTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR TCA 90 bp AGCCAGGCTCCTGAGGACAGGGTGTGCCTGAACTCGAGCCTACTGTTGGTTGAGCCAGCAACCATGTTCTaGACCACACAGCTGTTCTGC +
Preference number: 4 (lower is better)
Translates to: SQAPEDRVCLNSSLLLVEPATMF*TTQLFC
Trigger: GCAGAACAGCTGTGTGGTTCAGAACATGGTTGCTGG...CTCAACCAACAGTAGGCTCGAGTTCAGGCACACCCTGTCCTCAGGAGCCTGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR GCA 90 bp ATGGTACATGCCATCCAGAGTGTCCCCTGCAGGCTGCATGCAGCTGTCCAGCCTCCAGGCACAGATCTGTaGCAGGCAACTCTCATCAGT +
Preference number: 4 (lower is better)
Translates to: MVHAIQSVPCRLHAAVQPPGTDL*QATLIS
Trigger: ACTGATGAGAGTTGCCTGGCACAGATCTGTGCCTGG...AGGCTGGACAGCTGCATGCAGCCTGCAGGGGACACTCTGGATGGCATGTACCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342272.3
CDS-3UTR GCA 90 bp GAAGGAGCCCAGGACATTCCATTCCTCTTGGCACCACCACCGCCACCCAGCACAAGAGAACTGCTTTCCTaGCACCAACTTGCTGTGTGC +
Preference number: 4 (lower is better)
Translates to: EGAQDIPFLLAPPPPPSTRELLS*HQLAVC
Trigger: GCACACAGCAAGTTGGTGGCAGGAAAGCAGTTCTCT...TGTGCTGGGTGGCGGTGGTGGTGCCAAGAGGAATGGAATGTCCTGGGCTCCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR GCA 90 bp GGGACAGGAGCAGATCAGGAAGCTCAAGAGACCAGGGCGCTTCTCTCTGGGCTCCATGAGGGTCTCACCTaGAGTTGGTCTGTGGACAAA +
Preference number: 4 (lower is better)
Translates to: GTGADQEAQETRALLSGLHEGLT*SWSVDK
Trigger: TTTGTCCACAGACCAACTGCAGGTGAGACCCTCATG...GAGCCCAGAGAGAAGCGCCCTGGTCTCTTGAGCTTCCTGATCTGCTCCTGTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CCA 90 bp CCCCTGCAGGCTGCATGCAGCTGTCCAGCCTCCATGTGTGACTCCAGCTCTACCTGCCTGGCTGTGAACTaGGACATGAGATTTCCAAGA +
Preference number: 4 (lower is better)
Translates to: PLQAACSCPASMCDSSSTCLAVN*DMRFPR
Trigger: TCTTGGAAATCTCATGTCCCAGTTCACAGCCAGGCA...GGTAGAGCTGGAGTCACACATGGAGGCTGGACAGCTGCATGCAGCCTGCAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342272.3
CDS-3UTR CCA 90 bp GACCCATCAGACTTCCTAGAGCTGCCTGTGGTCAAGATTAGAAGAGGAGGCATCTGGCGTGGCTTGTCCTaGAGGCGGCAATCTCGGCCT +
Preference number: 4 (lower is better)
Translates to: DPSDFLELPVVKIRRGGIWRGLS*RRQSRP
Trigger: AGGCCGAGATTGCCGCCTCCAGGACAAGCCACGCCA...GATGCCTCCTCTTCTAATCTTGACCACAGGCAGCTCTAGGAAGTCTGATGGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CCA 90 bp GGGACAATGGGGATGGTACTACAGGCTGTACTGTCTTGTCTGTTTACCAAAACCCTGGTCCTCAAAGGGTaGGGGCTCGGGCGGCGTGGT +
Preference number: 4 (lower is better)
Translates to: GTMGMVLQAVLSCLFTKTLVLKG*GLGRRG
Trigger: ACCACGCCGCCCGAGCCCCCACCCTTTGAGGACCAG...GGTTTTGGTAAACAGACAAGACAGTACAGCCTGTAGTACCATCCCCATTGTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CCA 90 bp GAGAGAGTGAGGGAGTGGGAACTGGCCTCCATAGGCATAGTCAGAGTTTTGCACAGCCTCTGTGGAATGTaGCGATCCCCTCAGGCTCCC +
Preference number: 4 (lower is better)
Translates to: ERVREWELASIGIVRVLHSLCGM*RSPQAP
Trigger: GGGAGCCTGAGGGGATCGCCACATTCCACAGAGGCT...GTGCAAAACTCTGACTATGCCTATGGAGGCCAGTTCCCACTCCCTCACTCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CCA 90 bp GGGAAGCTAACTGGACTGGTGGGAGGAGACAGAGCACTGTGTTCTGGGATATTCCTGAGTCTCCAAACCTaGGGCTCAGGAAGCCGCCTC +
Preference number: 4 (lower is better)
Translates to: GKLTGLVGGDRALCSGIFLSLQT*GSGSRL
Trigger: GAGGCGGCTTCCTGAGCCCCAGGTTTGGAGACTCAG...GAATATCCCAGAACACAGTGCTCTGTCTCCTCCCACCAGTCCAGTTAGCTTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR TCA 90 bp GACCCATCAGACTTCCTAGAGCTGCCTGTGGTCAAGATTAGAAGAGGAGGCATCCTTGGCACCGCTGCTTaGGCTCTGCCGGATTCCGTA +
Preference number: 4 (lower is better)
Translates to: DPSDFLELPVVKIRRGGILGTAA*ALPDSV
Trigger: TACGGAATCCGGCAGAGCTCAAGCAGCGGTGCCAAG...GATGCCTCCTCTTCTAATCTTGACCACAGGCAGCTCTAGGAAGTCTGATGGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR TCA 90 bp AGAGTCCTGCAGAGACCTCAAGGCAGTGGGCCAGCATTGCTTTTAAGTTCATGCGGACCTTGTTGCTCTTaGGCTGCAGCATGCGGCGCT +
Preference number: 4 (lower is better)
Translates to: RVLQRPQGSGPALLLSSCGPCCS*AAACGA
Trigger: AGCGCCGCATGCTGCAGCTCAAGAGCAACAAGGTCC...GCATGAACTTAAAAGCAATGCTGGCCCACTGCCTTGAGGTCTCTGCAGGACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR TCA 90 bp GAGAGAGTGAGGGAGTGGGAACTGGCCTCCATAGGCATAGTCAGAGTTTTGCACGGTCAGGTCAGGAGGTaGACAAAGAGGATGGCCAGG +
Preference number: 4 (lower is better)
Translates to: ERVREWELASIGIVRVLHGQVRR*TKRMAR
Trigger: CCTGGCCATCCTCTTTGTTCACCTCCTGACCTGACC...GTGCAAAACTCTGACTATGCCTATGGAGGCCAGTTCCCACTCCCTCACTCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR TCA 90 bp GGGAAGCTAACTGGACTGGTGGGAGGAGACAGAGCACTGTGTTCTGGGATATTCCCCAGCCAGAGCCCGTaGGCAGATGCGGGTTTATTA +
Preference number: 4 (lower is better)
Translates to: GKLTGLVGGDRALCSGIFPSQSP*ADAGLL
Trigger: TAATAAACCCGCATCTGCTCACGGGCTCTGGCTGGG...GAATATCCCAGAACACAGTGCTCTGTCTCCTCCCACCAGTCCAGTTAGCTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR TCA 90 bp AGGACAGGTCTCTGTGCTGGTCTGAGGGGGTCTCAACACCCACCCCACCCAGCTGGCTCCCCCACTGATTaGGATATTCTGACTAAACAA +
Preference number: 4 (lower is better)
Translates to: RTGLCAGLRGSQHPPHPAGSPTD*DILTKQ
Trigger: TTGTTTAGTCAGAATATCTCAATCAGTGGGGGAGCC...AGCTGGGTGGGGTGGGTGTTGAGACCCCCTCAGACCAGCACAGAGACCTGTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR GCA 90 bp GCTGTGCTCTCCTGGGGTCTCCATAGAATGCCCAGAAGCTGCCAAGACAGCAGCAAAGCGTCCCAAGTCTaGCTTCCAAGAAGTCCAAGG +
Preference number: 4 (lower is better)
Translates to: AVLSWGLHRMPRSCQDSSKASQV*LPRSPR
Trigger: CCTTGGACTTCTTGGAAGGCAGACTTGGGACGCTTT...GCTGCTGTCTTGGCAGCTTCTGGGCATTCTATGGAGACCCCAGGAGAGCACAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342272.3
CDS-3UTR GCA 90 bp AGCCAGGCTCCTGAGGACAGGGTGTGCCTGAACTCGAGCCTACTGTTGGTTGAGAAAGCGTCCCAAGTCTaGCTTCCAAGAAGTCCAAGG +
Preference number: 4 (lower is better)
Translates to: SQAPEDRVCLNSSLLLVEKASQV*LPRSPR
Trigger: CCTTGGACTTCTTGGAAGGCAGACTTGGGACGCTTT...CTCAACCAACAGTAGGCTCGAGTTCAGGCACACCCTGTCCTCAGGAGCCTGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR GCA 90 bp ATTCCATCTACACTGGCAGGACTCAAGGCAGAACTAAGCGAATCAAAGTCTTGTGCAACACTCCTCCAGTaGCCTCGGGGGCAGGCCCCC +
Preference number: 4 (lower is better)
Translates to: IPSTLAGLKAELSESKSCATLLQ*PRGQAP
Trigger: GGGGGCCTGCCCCCGAGGGCACTGGAGGAGTGTTGC...ACAAGACTTTGATTCGCTTAGTTCTGCCTTGAGTCCTGCCAGTGTAGATGGAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000342272.3
CDS-3UTR GCA 90 bp TTTGTCCTCAAATATCCTCCCGAAGACAGTGACAGCTATGGTTCAGGCCATCCTGGCCCTTGGGGCCTGTaGACAGTCCATGCCCATGGG +
Preference number: 4 (lower is better)
Translates to: FVLKYPPEDSDSYGSGHPGPWGL*TVHAHG
Trigger: CCCATGGGCATGGACTGTGCACAGGCCCCAAGGGCC...AGGATGGCCTGAACCATAGCTGTCACTGTCTTCGGGAGGATATTTGAGGACAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342272.3
CDS-3UTR GCA 90 bp GTGAAAGTTACACGGGAGGGAGGTGTGCCAGCCCTAACTTCTCTCCTACTCTGTGGCCATTGTTCCAGGTaGCCTCATACTTGGCACCGC +
Preference number: 4 (lower is better)
Translates to: VKVTREGGVPALTSLLLCGHCSR*PHTWHR
Trigger: GCGGTGCCAAGTATGAGGGCACCTGGAACAATGGCC...ACAGAGTAGGAGAGAAGTTAGGGCTGGCACACCTCCCTCCCGTGTAACTTTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342272.3
CDS-3UTR GCA 90 bp GAGAGAGTGAGGGAGTGGGAACTGGCCTCCATAGGCATAGTCAGAGTTTTGCACGGCCATTGTTCCAGGTaGCCTCATACTTGGCACCGC +
Preference number: 4 (lower is better)
Translates to: ERVREWELASIGIVRVLHGHCSR*PHTWHR
Trigger: GCGGTGCCAAGTATGAGGGCACCTGGAACAATGGCC...GTGCAAAACTCTGACTATGCCTATGGAGGCCAGTTCCCACTCCCTCACTCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR GCA 90 bp ATTCCTAAAAAGTCAAGAGAACTGCTTTCCTGCCACCAACTTGCTGTGTGCGTGAGTCCGGGGCCACCGTaGCGTTGCTGTGCTCGCTGC +
Preference number: 4 (lower is better)
Translates to: IPKKSRELLSCHQLAVCVSPGPP*RCCARC
Trigger: GCAGCGAGCACAGCAACGGCACGGTGGCCCCGGACT...CACGCACACAGCAAGTTGGTGGCAGGAAAGCAGTTCTCTTGACTTTTTAGGAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR GCA 90 bp GGGACAATGGGGATGGTACTACAGGCTGTACTGTCTTGTCTGTTTACCAAAACCGGCGGCCTGTTCCGCTaGCTCAGCTTTGGCCTTGGC +
Preference number: 4 (lower is better)
Translates to: GTMGMVLQAVLSCLFTKTGGLFR*LSFGLG
Trigger: GCCAAGGCCAAAGCTGAGGCAGCGGAACAGGCCGCC...GGTTTTGGTAAACAGACAAGACAGTACAGCCTGTAGTACCATCCCCATTGTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR GCA 90 bp CCAAGCCCATCCTTCCTGGAATCCCAGCATCATTCCAGAGTTTTGAAAACTTTTCGACGGCGCAGGCGGTaGCTGCAGAGCCTCGATGGC +
Preference number: 4 (lower is better)
Translates to: PSPSFLESQHHSRVLKTFRRRRR*LQSLDG
Trigger: GCCATCGAGGCTCTGCAGGCACCGCCTGCGCCGTCG...AAAAGTTTTCAAAACTCTGGAATGATGCTGGGATTCCAGGAAGGATGGGCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR GCA 90 bp GGGAAGCTAACTGGACTGGTGGGAGGAGACAGAGCACTGTGTTCTGGGATATTCACCTGCCTTAGTGTCTaGCCCAGGGACATCTCCCTG +
Preference number: 4 (lower is better)
Translates to: GKLTGLVGGDRALCSGIFTCLSV*PRDISL
Trigger: CAGGGAGATGTCCCTGGGGCAGACACTAAGGCAGGT...GAATATCCCAGAACACAGTGCTCTGTCTCCTCCCACCAGTCCAGTTAGCTTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR GCA 90 bp GAGAGAGTGAGGGAGTGGGAACTGGCCTCCATAGGCATAGTCAGAGTTTTGCACTTGGAGCCCCAGACTTaGCCCTCTCTTGCCGGGAAA +
Preference number: 4 (lower is better)
Translates to: ERVREWELASIGIVRVLHLEPQT*PSLAGK
Trigger: TTTCCCGGCAAGAGAGGGGCAAGTCTGGGGCTCCAA...GTGCAAAACTCTGACTATGCCTATGGAGGCCAGTTCCCACTCCCTCACTCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR GCA 90 bp GGCCCTGATGGGGGAGGAGACAAGCCATTTCACAGGGCATCACAGGAGATTTCTGCCCCATTCCCCTCATaGTCCAGGAGTCTTGAGAAG +
Preference number: 4 (lower is better)
Translates to: GPDGGGDKPFHRASQEISAPFPS*SRSLEK
Trigger: CTTCTCAAGACTCCTGGAGCATGAGGGGAATGGGGC...AGAAATCTCCTGTGATGCCCTGTGAAATGGCTTGTCTCCTCCCCCATCAGGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR GCA 90 bp GAAGGAGCCCAGGACATTCCATTCCTCTTGGCACCACCACCGCCACCCAGCACACAGCCTCCTCTAACGTaGTGGAATTATAGGTGTGAG +
Preference number: 4 (lower is better)
Translates to: EGAQDIPFLLAPPPPPSTQPPLT*WNYRCE
Trigger: CTCACACCTATAATTCCAGCACGTTAGAGGAGGCTG...TGTGCTGGGTGGCGGTGGTGGTGCCAAGAGGAATGGAATGTCCTGGGCTCCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR GCA 90 bp GGGAAGCTAACTGGACTGGTGGGAGGAGACAGAGCACTGTGTTCTGGGATATTCGGCTGGCTGCCCACCTaGTTTCCCTCTGTGGGTTTT +
Preference number: 4 (lower is better)
Translates to: GKLTGLVGGDRALCSGIFGWLPT*FPSVGF
Trigger: AAAACCCACAGAGGGAAAGCAGGTGGGCAGCCAGCC...GAATATCCCAGAACACAGTGCTCTGTCTCCTCCCACCAGTCCAGTTAGCTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR GCA 90 bp AGAGTCCTGCAGAGACCTCAAGGCAGTGGGCCAGCATTGCTTTTAAGTTCATGCCAGACACACCCCATCTaGAGACCGGCCAACTGGGCT +
Preference number: 4 (lower is better)
Translates to: RVLQRPQGSGPALLLSSCQTHPI*RPANWA
Trigger: AGCCCAGTTGGCCGGTCTGCAGATGGGGTGTGTCTG...GCATGAACTTAAAAGCAATGCTGGCCCACTGCCTTGAGGTCTCTGCAGGACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR GCA 90 bp GGCCCTGATGGGGGAGGAGACAAGCCATTTCACAGGGCATCACAGGAGATTTCTCAATACAGCCACCCCTaGCCCCAACTCATCCAACAC +
Preference number: 4 (lower is better)
Translates to: GPDGGGDKPFHRASQEISQYSHP*PQLIQH
Trigger: GTGTTGGATGAGTTGGGGGCAGGGGTGGCTGTATTG...AGAAATCTCCTGTGATGCCCTGTGAAATGGCTTGTCTCCTCCCCCATCAGGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CCA 90 bp GACCCATCAGACTTCCTAGAGCTGCCTGTGGTCAAGATTAGAAGAGGAGGCATCAGAGCCAGCGCCCCTTaGTCTCTATGCCCAGCCCAT +
Preference number: 4 (lower is better)
Translates to: DPSDFLELPVVKIRRGGIRASAP*SLCPAH
Trigger: ATGGGCTGGGCATAGAGACCAAGGGGCGCTGGCTCT...GATGCCTCCTCTTCTAATCTTGACCACAGGCAGCTCTAGGAAGTCTGATGGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CCA 90 bp TGCAGGCTGCATGCAGCTGTCCAGCCTCCATGTGTGACTCCAGCTCTACCCCATGGATTCCATCTACACTaGCAGGACTCAAGGCAGAAC +
Preference number: 4 (lower is better)
Translates to: CRLHAAVQPPCVTPALPHGFHLH*QDSRQN
Trigger: GTTCTGCCTTGAGTCCTGCCAGTGTAGATGGAATCC...ATGGGGTAGAGCTGGAGTCACACATGGAGGCTGGACAGCTGCATGCAGCCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342272.3
CDS-3UTR CCA 90 bp ATTCCTAAAAAGTCAAGAGAACTGCTTTCCTGCCACCAACTTGCTGTGTGCGTGATTCCCGCAGCCCGCTaGCCCCCTTCTCCACCCCAG +
Preference number: 4 (lower is better)
Translates to: IPKKSRELLSCHQLAVCVIPAAR*PPSPPQ
Trigger: CTGGGGTGGAGAAGGGGGCCAGCGGGCTGCGGGAAT...CACGCACACAGCAAGTTGGTGGCAGGAAAGCAGTTCTCTTGACTTTTTAGGAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CCA 90 bp GGCCCTGATGGGGGAGGAGACAAGCCATTTCACAGGGCATCACAGGAGATTTCTATGCCGTTGGTGAACTaGCCTTGGTACGTCCCTCCA +
Preference number: 4 (lower is better)
Translates to: GPDGGGDKPFHRASQEISMPLVN*PWYVPP
Trigger: TGGAGGGACGTACCAAGGCCAGTTCACCAACGGCAT...AGAAATCTCCTGTGATGCCCTGTGAAATGGCTTGTCTCCTCCCCCATCAGGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CCA 90 bp GGCCCTGATGGGGGAGGAGACAAGCCATTTCACAGGGCATCACAGGAGATTTCTACATTCCATTCCTCTTaGCACCACCACCGCCACCCA +
Preference number: 4 (lower is better)
Translates to: GPDGGGDKPFHRASQEISTFHSS*HHHRHP
Trigger: TGGGTGGCGGTGGTGGTGCCAAGAGGAATGGAATGT...AGAAATCTCCTGTGATGCCCTGTGAAATGGCTTGTCTCCTCCCCCATCAGGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CCA 90 bp AGGACAGGTCTCTGTGCTGGTCTGAGGGGGTCTCAACACCCACCCCACCCAGCTCAGCCAGGTCTTCTGTaGGTCCATCAGATTATGAAA +
Preference number: 4 (lower is better)
Translates to: RTGLCAGLRGSQHPPHPAQPGLL*VHQIMK
Trigger: TTTCATAATCTGATGGACCCACAGAAGACCTGGCTG...AGCTGGGTGGGGTGGGTGTTGAGACCCCCTCAGACCAGCACAGAGACCTGTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CCA 90 bp GGGACAGGAGCAGATCAGGAAGCTCAAGAGACCAGGGCGCTTCTCTCTGGGCTCCTTTGTTATTCATGGTaGGCTCCTGGGACCACAACT +
Preference number: 4 (lower is better)
Translates to: GTGADQEAQETRALLSGLLCYSW*APGTTT
Trigger: AGTTGTGGTCCCAGGAGCCCACCATGAATAACAAAG...GAGCCCAGAGAGAAGCGCCCTGGTCTCTTGAGCTTCCTGATCTGCTCCTGTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CCA 90 bp GGGACAGGAGCAGATCAGGAAGCTCAAGAGACCAGGGCGCTTCTCTCTGGGCTCCTAGTGGAGAAGCTGTaGATAGGAAGAGATACAGGG +
Preference number: 4 (lower is better)
Translates to: GTGADQEAQETRALLSGLLVEKL*IGRDTG
Trigger: CCCTGTATCTCTTCCTATCCACAGCTTCTCCACTAG...GAGCCCAGAGAGAAGCGCCCTGGTCTCTTGAGCTTCCTGATCTGCTCCTGTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR CAA 72 bp CCCTCTCTTGCCGGGAAATGCTTCTTGACAAGCAGCTaGTCTTCAACACCTGCCTTAGTGTCTGCCCCAGGG +
Preference number: 4 (lower is better)
Translates to: PSLAGKCFLTSS*SSTPALVSAPG
Trigger: CCCTGGGGCAGACACTAAGGCAGGTGTTGAAGACAAGCTGCTTGTCAAGAAGCATTTCCCGGCAAGAGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR CAA 72 bp CTGCTTTCCTGCCACCAACTTGCTGTGTGCGTGACCTaGGGCAAGTCCCTCTGCTCTAAGCCTCTGTGGAAT +
Preference number: 4 (lower is better)
Translates to: LLSCHQLAVCVT*GKSLCSKPLWN
Trigger: ATTCCACAGAGGCTTAGAGCAGAGGGACTTGCCCAAGGTCACGCACACAGCAAGTTGGTGGCAGGAAAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR CAA 72 bp GAGTCTCCAAACCTGGGGCTCAGGAAGCCGCCTCCTTaGCACACCATCCAAAGTGAGTTCAATACAGCCACC +
Preference number: 4 (lower is better)
Translates to: ESPNLGLRKPPP*HTIQSEFNTAT
Trigger: GGTGGCTGTATTGAACTCACTTTGGATGGTGTGCAAAGGAGGCGGCTTCCTGAGCCCCAGGTTTGGAGACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR TCA 90 bp CTAGCATCCCAAGCACACGGGAAACCCCAAATGCAATCCCAGTCTCAGACACACGGATCACCATGCAGATaGGGATGGTGTTGGGGACCT +
Preference number: 4 (lower is better)
Translates to: LASQAHGKPQMQSQSQTHGSPCR*GWCWGP
Trigger: AGGTCCCCAACACCATCCTCATCTGCATGGTGATCC...GTGTGTCTGAGACTGGGATTGCATTTGGGGTTTCCCGTGTGCTTGGGATGCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR TCA 90 bp GGGAAGCTAACTGGACTGGTGGGAGGAGACAGAGCACTGTGTTCTGGGATATTCAACTTGCTGTGTGCGTaGCCTTGGGCAAGTCCCTCT +
Preference number: 4 (lower is better)
Translates to: GKLTGLVGGDRALCSGIFNLLCA*PWASPS
Trigger: AGAGGGACTTGCCCAAGGTCACGCACACAGCAAGTT...GAATATCCCAGAACACAGTGCTCTGTCTCCTCCCACCAGTCCAGTTAGCTTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR TCA 90 bp GGCCCTGATGGGGGAGGAGACAAGCCATTTCACAGGGCATCACAGGAGATTTCTGAGCCTACTGTTGGTTaGGGGACCTTCTTCTCCAAC +
Preference number: 4 (lower is better)
Translates to: GPDGGGDKPFHRASQEISEPTVG*GTFFSN
Trigger: GTTGGAGAAGAAGGTCCCTCAACCAACAGTAGGCTC...AGAAATCTCCTGTGATGCCCTGTGAAATGGCTTGTCTCCTCCCCCATCAGGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR TCA 90 bp GACCCATCAGACTTCCTAGAGCTGCCTGTGGTCAAGATTAGAAGAGGAGGCATCAACCCTACCTGGCTCTaGGTCTCCAAACCTGGGGCT +
Preference number: 4 (lower is better)
Translates to: DPSDFLELPVVKIRRGGINPTWL*VSKPGA
Trigger: AGCCCCAGGTTTGGAGACTCAGAGCCAGGTAGGGTT...GATGCCTCCTCTTCTAATCTTGACCACAGGCAGCTCTAGGAAGTCTGATGGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR TCA 90 bp GGGACAGGAGCAGATCAGGAAGCTCAAGAGACCAGGGCGCTTCTCTCTGGGCTCTCCCTCAGACTTTGCTaGCTTTACAGCCTCAAGATT +
Preference number: 4 (lower is better)
Translates to: GTGADQEAQETRALLSGLSLRLC*LYSLKI
Trigger: AATCTTGAGGCTGTAAAGTCAGCAAAGTCTGAGGGA...GAGCCCAGAGAGAAGCGCCCTGGTCTCTTGAGCTTCCTGATCTGCTCCTGTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR GCA 90 bp CCAATCAGTGATGGCATCTTCCACATACAGCAAAGAAGTGATATAGCCAGGATTATCGGCCTCGAAGGGTaGGGCCTCGTCGGCGCCCTC +
Preference number: 4 (lower is better)
Translates to: PISDGIFHIQQRSDIARIIGLEG*GLVGAL
Trigger: GAGGGCGCCGACGAGGCCGCACCCTTCGAGGCCGAT...AATCCTGGCTATATCACTTCTTTGCTGTATGTGGAAGATGCCATCACTGATTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR GCA 90 bp GGCCCTGATGGGGGAGGAGACAAGCCATTTCACAGGGCATCACAGGAGATTTCTACAGGCCATCATCACTaGACCTTAACCCCTCTTCCC +
Preference number: 4 (lower is better)
Translates to: GPDGGGDKPFHRASQEISTGHHH*TLTPLP
Trigger: GGGAAGAGGGGTTAAGGTGCAGTGATGATGGCCTGT...AGAAATCTCCTGTGATGCCCTGTGAAATGGCTTGTCTCCTCCCCCATCAGGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR GCA 90 bp CTAGCATCCCAAGCACACGGGAAACCCCAAATGCAATCCCAGTCTCAGACACACCTGAAGCCCTTCAGCTaGCCCTCAAGGATCGTGAGA +
Preference number: 4 (lower is better)
Translates to: LASQAHGKPQMQSQSQTHLKPFS*PSRIVR
Trigger: TCTCACGATCCTTGAGGGGCAGCTGAAGGGCTTCAG...GTGTGTCTGAGACTGGGATTGCATTTGGGGTTTCCCGTGTGCTTGGGATGCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR GCA 90 bp AGGACAGGTCTCTGTGCTGGTCTGAGGGGGTCTCAACACCCACCCCACCCAGCTTCTCCATTTCTCCACTaGTTTCTACAGCCTCAACAT +
Preference number: 4 (lower is better)
Translates to: RTGLCAGLRGSQHPPHPASPFLH*FLQPQH
Trigger: ATGTTGAGGCTGTAGAAAGCAGTGGAGAAATGGAGA...AGCTGGGTGGGGTGGGTGTTGAGACCCCCTCAGACCAGCACAGAGACCTGTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR GCA 90 bp CCAGCCAGAGGATCCATGGGGTCTCCCCTCGTCTATTGGTCCAGAAGGGAAGCTGTGACTCTCAGTGTCTaGTCCTGCAGAATCCAATCA +
Preference number: 4 (lower is better)
Translates to: PARGSMGSPLVYWSRREAVTLSV*SCRIQS
Trigger: TGATTGGATTCTGCAGGAGCAGACACTGAGAGTCAC...AGCTTCCCTTCTGGACCAATAGACGAGGGGAGACCCCATGGATCCTCTGGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CCA 90 bp GTGAAAGTTACACGGGAGGGAGGTGTGCCAGCCCTAACTTCTCTCCTACTCTGTCCATGCCGTTTGCCCTaGCTCCAGTATCCCTCAAAG +
Preference number: 4 (lower is better)
Translates to: VKVTREGGVPALTSLLLCPCRLP*LQYPSK
Trigger: CTTTGAGGGATACTGGAGCCAGGGCAAACGGCATGG...ACAGAGTAGGAGAGAAGTTAGGGCTGGCACACCTCCCTCCCGTGTAACTTTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342272.3
CDS-3UTR CCA 90 bp TCTTTAAGTGAGGTACATCCAAGTAGCCATCTTCTACCAAGTAAGCCAAAGGGGACCTCGGGCTCGGGCTaGTCCTCAAAGGGTGGGGGC +
Preference number: 4 (lower is better)
Translates to: SLSEVHPSSHLLPSKPKGTSGSG*SSKGGG
Trigger: GCCCCCACCCTTTGAGGACCAGCCCGAGCCCGAGGT...CCCCTTTGGCTTACTTGGTAGAAGATGGCTACTTGGATGTACCTCACTTAAAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CCA 90 bp GGGAAGCTAACTGGACTGGTGGGAGGAGACAGAGCACTGTGTTCTGGGATATTCTTTGGCCACCCTGCCTaGCACTGCAAAAAGACGGGT +
Preference number: 4 (lower is better)
Translates to: GKLTGLVGGDRALCSGIFFGHPA*HCKKTG
Trigger: ACCCGTCTTTTTGCAGTGCCAGGCAGGGTGGCCAAA...GAATATCCCAGAACACAGTGCTCTGTCTCCTCCCACCAGTCCAGTTAGCTTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CCA 90 bp GACCCATCAGACTTCCTAGAGCTGCCTGTGGTCAAGATTAGAAGAGGAGGCATCCCAGGGACATCTCCCTaGGCTTCCATGGGCTTCTGT +
Preference number: 4 (lower is better)
Translates to: DPSDFLELPVVKIRRGGIPGTSP*ASMGFC
Trigger: ACAGAAGCCCATGGAAGCCCAGGGAGATGTCCCTGG...GATGCCTCCTCTTCTAATCTTGACCACAGGCAGCTCTAGGAAGTCTGATGGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CCA 90 bp CAACCCATCCCCACTCCCCAACCATACTGCCTCTTATGGCCACCATATCCATTTGGAAACCATAGCCTTTaGCCCTCACCCCACCCACAG +
Preference number: 4 (lower is better)
Translates to: QPIPTPQPYCLLWPPYPFGNHSL*PSPHPQ
Trigger: CTGTGGGTGGGGTGAGGGCCAAAGGCTATGGTTTCC...AAATGGATATGGTGGCCATAAGAGGCAGTATGGTTGGGGAGTGGGGATGGGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CCA 90 bp CAACCCATCCCCACTCCCCAACCATACTGCCTCTTATGGCCACCATATCCATTTAGCAGCAGTTCCCTCTaGCTCAGCTTGGATGCCACG +
Preference number: 4 (lower is better)
Translates to: QPIPTPQPYCLLWPPYPFSSSSL*LSLDAT
Trigger: CGTGGCATCCAAGCTGAGCCAGAGGGAACTGCTGCT...AAATGGATATGGTGGCCATAAGAGGCAGTATGGTTGGGGAGTGGGGATGGGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CCA 90 bp GACCCATCAGACTTCCTAGAGCTGCCTGTGGTCAAGATTAGAAGAGGAGGCATCGAACAAGGACACAGATaGGAAGGACCCACGTCCCCC +
Preference number: 4 (lower is better)
Translates to: DPSDFLELPVVKIRRGGIEQGHR*EGPTSP
Trigger: GGGGGACGTGGGTCCTTCCCATCTGTGTCCTTGTTC...GATGCCTCCTCTTCTAATCTTGACCACAGGCAGCTCTAGGAAGTCTGATGGGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CCA 90 bp CAACCCATCCCCACTCCCCAACCATACTGCCTCTTATGGCCACCATATCCATTTGCTAGCATTGGAGGCTaGGGGGACTCCACCTCAAAG +
Preference number: 4 (lower is better)
Translates to: QPIPTPQPYCLLWPPYPFASIGG*GDSTSK
Trigger: CTTTGAGGTGGAGTCCCCCCAGCCTCCAATGCTAGC...AAATGGATATGGTGGCCATAAGAGGCAGTATGGTTGGGGAGTGGGGATGGGTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CCA 90 bp CCAGCCAGAGGATCCATGGGGTCTCCCCTCGTCTATTGGTCCAGAAGGGAAGCTCCTCCTCTAACGTGCTaGAATTATAGGTGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: PARGSMGSPLVYWSRREAPPLTC*NYRCEP
Trigger: TGGCTCACACCTATAATTCCAGCACGTTAGAGGAGG...AGCTTCCCTTCTGGACCAATAGACGAGGGGAGACCCCATGGATCCTCTGGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CCA 90 bp GAAGGAGCCCAGGACATTCCATTCCTCTTGGCACCACCACCGCCACCCAGCACACCTGCTTTCCCTCTGTaGGTTTTTATCAAAGGCTAC +
Preference number: 4 (lower is better)
Translates to: EGAQDIPFLLAPPPPPSTPAFPL*VFIKGY
Trigger: GTAGCCTTTGATAAAAACCCACAGAGGGAAAGCAGG...TGTGCTGGGTGGCGGTGGTGGTGCCAAGAGGAATGGAATGTCCTGGGCTCCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CCA 90 bp AGAGTCCTGCAGAGACCTCAAGGCAGTGGGCCAGCATTGCTTTTAAGTTCATGCGAGAGAGTGAGGGAGTaGGAACTGGCCTCCATAGGC +
Preference number: 4 (lower is better)
Translates to: RVLQRPQGSGPALLLSSCERVRE*ELASIG
Trigger: GCCTATGGAGGCCAGTTCCCACTCCCTCACTCTCTC...GCATGAACTTAAAAGCAATGCTGGCCCACTGCCTTGAGGTCTCTGCAGGACTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CCA 90 bp CAACCCATCCCCACTCCCCAACCATACTGCCTCTTATGGCCACCATATCCATTTCTCTGGAGCTCCCACTaGGTTGGACTTTGTCAGGCC +
Preference number: 4 (lower is better)
Translates to: QPIPTPQPYCLLWPPYPFLWSSH*VGLCQA
Trigger: GGCCTGACAAAGTCCAACCCAGTGGGAGCTCCAGAG...AAATGGATATGGTGGCCATAAGAGGCAGTATGGTTGGGGAGTGGGGATGGGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CCA 90 bp GGGACAGGAGCAGATCAGGAAGCTCAAGAGACCAGGGCGCTTCTCTCTGGGCTCTCACATCTTACTAGATaGCAGCAGGCAAAGAGAGGA +
Preference number: 4 (lower is better)
Translates to: GTGADQEAQETRALLSGLSHLTR*QQAKRG
Trigger: TCCTCTCTTTGCCTGCTGCCATCTAGTAAGATGTGA...GAGCCCAGAGAGAAGCGCCCTGGTCTCTTGAGCTTCCTGATCTGCTCCTGTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR CAA 72 bp GTGAATGTTCTGACACATGAGGTGCCCTGGCATCTGTaGCCGTACATGAGGGTCTCACCTGCAGTTGGTCTG +
Preference number: 4 (lower is better)
Translates to: VNVLTHEVPWHL*PYMRVSPAVGL
Trigger: CAGACCAACTGCAGGTGAGACCCTCATGTACGGCAACAGATGCCAGGGCACCTCATGTGTCAGAACATTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR TCA 90 bp TCATCAGTTCCCTTTAAGCAGGGAGTGAAAGTTACACGGGAGGGAGGTGTGCCATCCTCCCGAAGACAGTaGCAGCTATGGTTCAGGCCA +
Preference number: 4 (lower is better)
Translates to: SSVPFKQGVKVTREGGVPSSRRQ*QLWFRP
Trigger: TGGCCTGAACCATAGCTGTCACTGTCTTCGGGAGGA...TGGCACACCTCCCTCCCGTGTAACTTTCACTCCCTGCTTAAAGGGAACTGATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342272.3
CDS-3UTR TCA 90 bp CTGCTCTGTGGATTCTGCCAGGCACAGATCTGTGCCAGGCAACTCTCATCAGTTCCTTTAAGCAGGGAGTaGAAGTTACACGGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: LLCGFCQAQICARQLSSVPLSRE*KLHGRE
Trigger: CTCCCTCCCGTGTAACTTTCACTCCCTGCTTAAAGG...AACTGATGAGAGTTGCCTGGCACAGATCTGTGCCTGGCAGAATCCACAGAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342272.3
CDS-3UTR TCA 90 bp AGCCAGGCTCCTGAGGACAGGGTGTGCCTGAACTCGAGCCTACTGTTGGTTGAGGAAGGGGGATGGGATTaGATATCAATGTCCTGGTTA +
Preference number: 4 (lower is better)
Translates to: SQAPEDRVCLNSSLLLVEEGGWD*ISMSWL
Trigger: TAACCAGGACATTGATATTCAATCCCATCCCCCTTC...CTCAACCAACAGTAGGCTCGAGTTCAGGCACACCCTGTCCTCAGGAGCCTGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR TCA 90 bp GAAGGAGCCCAGGACATTCCATTCCTCTTGGCACCACCACCGCCACCCAGCACAAAGATGAGATTTGGGTaGGAACACAGCCAAACCATA +
Preference number: 4 (lower is better)
Translates to: EGAQDIPFLLAPPPPPSTKMRFG*EHSQTI
Trigger: TATGGTTTGGCTGTGTTCTCACCCAAATCTCATCTT...TGTGCTGGGTGGCGGTGGTGGTGCCAAGAGGAATGGAATGTCCTGGGCTCCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR GCA 90 bp TCATCAGTTCCCTTTAAGCAGGGAGTGAAAGTTACACGGGAGGGAGGTGTGCCAGTTCTGCTAAGGGTCTaGTGTGCTCTCCTGGGGTCT +
Preference number: 4 (lower is better)
Translates to: SSVPFKQGVKVTREGGVPVLLRV*CALLGS
Trigger: AGACCCCAGGAGAGCACAGCAGACCCTTAGCAGAAC...TGGCACACCTCCCTCCCGTGTAACTTTCACTCCCTGCTTAAAGGGAACTGATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342272.3
CDS-3UTR GCA 90 bp GGGACAGGAGCAGATCAGGAAGCTCAAGAGACCAGGGCGCTTCTCTCTGGGCTCGAGGATGGAAGAATCTaGAGGTTCTTCTCCATGAAA +
Preference number: 4 (lower is better)
Translates to: GTGADQEAQETRALLSGLEDGRI*RFFSMK
Trigger: TTTCATGGAGAAGAACCTGCAGATTCTTCCATCCTC...GAGCCCAGAGAGAAGCGCCCTGGTCTCTTGAGCTTCCTGATCTGCTCCTGTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR GCA 90 bp CAACCCATCCCCACTCCCCAACCATACTGCCTCTTATGGCCACCATATCCATTTAAGCTCAGATGCAGATaGAGAGCTGTGGGCCATGGC +
Preference number: 4 (lower is better)
Translates to: QPIPTPQPYCLLWPPYPFKLRCR*RAVGHG
Trigger: GCCATGGCCCACAGCTCTGCATCTGCATCTGAGCTT...AAATGGATATGGTGGCCATAAGAGGCAGTATGGTTGGGGAGTGGGGATGGGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR GCA 90 bp GGGACAGGAGCAGATCAGGAAGCTCAAGAGACCAGGGCGCTTCTCTCTGGGCTCTATTATTGCACAGACTaGAGCATCCTGAACCCCAAA +
Preference number: 4 (lower is better)
Translates to: GTGADQEAQETRALLSGLYYCTD*SILNPK
Trigger: TTTGGGGTTCAGGATGCTGCAGTCTGTGCAATAATA...GAGCCCAGAGAGAAGCGCCCTGGTCTCTTGAGCTTCCTGATCTGCTCCTGTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR GCA 90 bp AGCCAGGCTCCTGAGGACAGGGTGTGCCTGAACTCGAGCCTACTGTTGGTTGAGATGCGGGTTTATTATTaGACAGACTGCAGCATCCTG +
Preference number: 4 (lower is better)
Translates to: SQAPEDRVCLNSSLLLVEMRVYY*TDCSIL
Trigger: CAGGATGCTGCAGTCTGTGCAATAATAAACCCGCAT...CTCAACCAACAGTAGGCTCGAGTTCAGGCACACCCTGTCCTCAGGAGCCTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR GCA 90 bp CAACCCATCCCCACTCCCCAACCATACTGCCTCTTATGGCCACCATATCCATTTCACCAACTTGCTGTGTaGGTGACCTTGGGCAAGTCC +
Preference number: 4 (lower is better)
Translates to: QPIPTPQPYCLLWPPYPFHQLAV*VTLGKS
Trigger: GGACTTGCCCAAGGTCACGCACACAGCAAGTTGGTG...AAATGGATATGGTGGCCATAAGAGGCAGTATGGTTGGGGAGTGGGGATGGGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR GCA 90 bp GGGAAGCTAACTGGACTGGTGGGAGGAGACAGAGCACTGTGTTCTGGGATATTCACCACACAGCTGTTCTaGCACCACATACAGGAGGTG +
Preference number: 4 (lower is better)
Translates to: GKLTGLVGGDRALCSGIFTTQLF*HHIQEV
Trigger: CACCTCCTGTATGTGGTGGCAGAACAGCTGTGTGGT...GAATATCCCAGAACACAGTGCTCTGTCTCCTCCCACCAGTCCAGTTAGCTTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR GCA 90 bp GGGACAGGAGCAGATCAGGAAGCTCAAGAGACCAGGGCGCTTCTCTCTGGGCTCGCTCTGTCACTGACTTaGTGTGTGATCCTTACAAAT +
Preference number: 4 (lower is better)
Translates to: GTGADQEAQETRALLSGLALSLT*CVILTN
Trigger: ATTTGTAAGGATCACACAGCAAGTCAGTGACAGAGC...GAGCCCAGAGAGAAGCGCCCTGGTCTCTTGAGCTTCCTGATCTGCTCCTGTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR GCA 90 bp GAGAGAGTGAGGGAGTGGGAACTGGCCTCCATAGGCATAGTCAGAGTTTTGCACTCTACAAGCAATCCTTaGTCTGGAGCTCCCACTGGG +
Preference number: 4 (lower is better)
Translates to: ERVREWELASIGIVRVLHSTSNP*SGAPTG
Trigger: CCCAGTGGGAGCTCCAGAGCAAGGATTGCTTGTAGA...GTGCAAAACTCTGACTATGCCTATGGAGGCCAGTTCCCACTCCCTCACTCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CCA 90 bp TTTGTCCTCAAATATCCTCCCGAAGACAGTGACAGCTATGGTTCAGGCCATCCTATGGGCAGCCAGCAGTaGCAGGAAGACCTCCAGGCA +
Preference number: 4 (lower is better)
Translates to: FVLKYPPEDSDSYGSGHPMGSQQ*QEDLQA
Trigger: TGCCTGGAGGTCTTCCTGCCACTGCTGGCTGCCCAT...AGGATGGCCTGAACCATAGCTGTCACTGTCTTCGGGAGGATATTTGAGGACAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342272.3
CDS-3UTR CCA 90 bp CCAAGCCCATCCTTCCTGGAATCCCAGCATCATTCCAGAGTTTTGAAAACTTTTTGCCCCCTGGCCACCTaGTCAGTGGCTTCCCAGCCA +
Preference number: 4 (lower is better)
Translates to: PSPSFLESQHHSRVLKTFCPLAT*SVASQP
Trigger: TGGCTGGGAAGCCACTGACCAGGTGGCCAGGGGGCA...AAAAGTTTTCAAAACTCTGGAATGATGCTGGGATTCCAGGAAGGATGGGCTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CCA 90 bp CAACCCATCCCCACTCCCCAACCATACTGCCTCTTATGGCCACCATATCCATTTAGGCTTGGAGGGGCCTaGAAGCCCTTTCTCTCCATT +
Preference number: 4 (lower is better)
Translates to: QPIPTPQPYCLLWPPYPFRLGGA*KPFLSI
Trigger: AATGGAGAGAAAGGGCTTCCAGGCCCCTCCAAGCCT...AAATGGATATGGTGGCCATAAGAGGCAGTATGGTTGGGGAGTGGGGATGGGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CCA 90 bp GACCCATCAGACTTCCTAGAGCTGCCTGTGGTCAAGATTAGAAGAGGAGGCATCTCCCTTTCACTGCCCTaGAAGAGTCCTGCAGAGACC +
Preference number: 4 (lower is better)
Translates to: DPSDFLELPVVKIRRGGISLSLP*KSPAET
Trigger: GGTCTCTGCAGGACTCTTCCAGGGCAGTGAAAGGGA...GATGCCTCCTCTTCTAATCTTGACCACAGGCAGCTCTAGGAAGTCTGATGGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CCA 90 bp GAGAGAGTGAGGGAGTGGGAACTGGCCTCCATAGGCATAGTCAGAGTTTTGCACACACATGAGGTGCCCTaGCATCTGTTGCCGTACATG +
Preference number: 4 (lower is better)
Translates to: ERVREWELASIGIVRVLHTHEVP*HLLPYM
Trigger: CATGTACGGCAACAGATGCCAGGGCACCTCATGTGT...GTGCAAAACTCTGACTATGCCTATGGAGGCCAGTTCCCACTCCCTCACTCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CCA 90 bp CCAGCCAGAGGATCCATGGGGTCTCCCCTCGTCTATTGGTCCAGAAGGGAAGCTGTTAGCTTCCCTGGTTaGCCATACTTTGTCATACTG +
Preference number: 4 (lower is better)
Translates to: PARGSMGSPLVYWSRREAVSFPG*PYFVIL
Trigger: CAGTATGACAAAGTATGGCCAACCAGGGAAGCTAAC...AGCTTCCCTTCTGGACCAATAGACGAGGGGAGACCCCATGGATCCTCTGGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CCA 90 bp GAGAGAGTGAGGGAGTGGGAACTGGCCTCCATAGGCATAGTCAGAGTTTTGCACTGGACACTGAAGCACTaGTTAGCTTCCCTGGTTGGC +
Preference number: 4 (lower is better)
Translates to: ERVREWELASIGIVRVLHWTLKH*LASLVG
Trigger: GCCAACCAGGGAAGCTAACCAGTGCTTCAGTGTCCA...GTGCAAAACTCTGACTATGCCTATGGAGGCCAGTTCCCACTCCCTCACTCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CCA 90 bp GGCCCTGATGGGGGAGGAGACAAGCCATTTCACAGGGCATCACAGGAGATTTCTGTGGGACAATGGGGATaGTACTACAGGCTGTACTGT +
Preference number: 4 (lower is better)
Translates to: GPDGGGDKPFHRASQEISVGQWG*YYRLYC
Trigger: ACAGTACAGCCTGTAGTACCATCCCCATTGTCCCAC...AGAAATCTCCTGTGATGCCCTGTGAAATGGCTTGTCTCCTCCCCCATCAGGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CCA 90 bp AGAGTCCTGCAGAGACCTCAAGGCAGTGGGCCAGCATTGCTTTTAAGTTCATGCGCCCCGAGACCTAAGTaGGACAATGGGGATGGTACT +
Preference number: 4 (lower is better)
Translates to: RVLQRPQGSGPALLLSSCAPRPK*DNGDGT
Trigger: AGTACCATCCCCATTGTCCCACTTAGGTCTCGGGGC...GCATGAACTTAAAAGCAATGCTGGCCCACTGCCTTGAGGTCTCTGCAGGACTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CCA 90 bp AGAGTCCTGCAGAGACCTCAAGGCAGTGGGCCAGCATTGCTTTTAAGTTCATGCGAGCTCCCACTGGGTTaGACTTTGTCAGGCCTGCAT +
Preference number: 4 (lower is better)
Translates to: RVLQRPQGSGPALLLSSCELPLG*TLSGLH
Trigger: ATGCAGGCCTGACAAAGTCCAACCCAGTGGGAGCTC...GCATGAACTTAAAAGCAATGCTGGCCCACTGCCTTGAGGTCTCTGCAGGACTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR CAA 72 bp GCAATCCTTGCTCTGGAGCTCCCACTGGGTTGGACTTaGTCAGGCCTGCATCAAGTTAGACTTCTTCCTCTG +
Preference number: 4 (lower is better)
Translates to: AILALELPLGWT*SGLHQVRLLPL
Trigger: CAGAGGAAGAAGTCTAACTTGATGCAGGCCTGACAAAGTCCAACCCAGTGGGAGCTCCAGAGCAAGGATTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR TCA 90 bp GTGCCAGGCATGATGCTCAGTGCTTCATTGTCTTGTTTCATTGTCTCGACCATACTTGGCACCGCTGCTTaGGCTCTGCCGGATTCCGTA +
Preference number: 4 (lower is better)
Translates to: VPGMMLSASLSCFIVSTILGTAA*ALPDSV
Trigger: TACGGAATCCGGCAGAGCTCAAGCAGCGGTGCCAAG...TATGGTCGAGACAATGAAACAAGACAATGAAGCACTGAGCATCATGCCTGGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342272.3
CDS-3UTR TCA 90 bp GTGAAAGTTACACGGGAGGGAGGTGTGCCAGCCCTAACTTCTCTCCTACTCTGTCCTATGTGCCAGGCATaGTGCTCAGTGCTTCATTGT +
Preference number: 4 (lower is better)
Translates to: VKVTREGGVPALTSLLLCPMCQA*CSVLHC
Trigger: ACAATGAAGCACTGAGCATCATGCCTGGCACATAGG...ACAGAGTAGGAGAGAAGTTAGGGCTGGCACACCTCCCTCCCGTGTAACTTTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342272.3
CDS-3UTR TCA 90 bp CTGTGCTCTCCTGGGGTCTCCATAGAATGCCCAGAAGCTGCCAAGACAGCAGCTTGGTTCAGGCCATCCTaGATTAATTCACCCTTTGGA +
Preference number: 4 (lower is better)
Translates to: LCSPGVSIECPEAAKTAAWFRPS*INSPFG
Trigger: TCCAAAGGGTGAATTAATTCAGGATGGCCTGAACCA...AGCTGCTGTCTTGGCAGCTTCTGGGCATTCTATGGAGACCCCAGGAGAGCACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342272.3
CDS-3UTR TCA 90 bp GGGACAATGGGGATGGTACTACAGGCTGTACTGTCTTGTCTGTTTACCAAAACCGGTCCCAGCAGGGCTTaGAACGGCAAGTGTGAAGCT +
Preference number: 4 (lower is better)
Translates to: GTMGMVLQAVLSCLFTKTGPSRA*NGKCEA
Trigger: AGCTTCACACTTGCCGTTTCAAGCCCTGCTGGGACC...GGTTTTGGTAAACAGACAAGACAGTACAGCCTGTAGTACCATCCCCATTGTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR TCA 90 bp CTAGCATCCCAAGCACACGGGAAACCCCAAATGCAATCCCAGTCTCAGACACACATGCTCCAGGAGTCTTaGGAAGCTCAGATGCAGATG +
Preference number: 4 (lower is better)
Translates to: LASQAHGKPQMQSQSQTHMLQES*EAQMQM
Trigger: CATCTGCATCTGAGCTTCTCAAGACTCCTGGAGCAT...GTGTGTCTGAGACTGGGATTGCATTTGGGGTTTCCCGTGTGCTTGGGATGCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR TCA 90 bp CCAATCAGTGATGGCATCTTCCACATACAGCAAAGAAGTGATATAGCCAGGATTGGGGAGCCAGGCTCCTaGGGACAGGGTGTGCCTGAA +
Preference number: 4 (lower is better)
Translates to: PISDGIFHIQQRSDIARIGEPGS*GQGVPE
Trigger: TTCAGGCACACCCTGTCCTCAGGAGCCTGGCTCCCC...AATCCTGGCTATATCACTTCTTTGCTGTATGTGGAAGATGCCATCACTGATTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR TCA 90 bp CAACCCATCCCCACTCCCCAACCATACTGCCTCTTATGGCCACCATATCCATTTCTGGCTCATCTGCAGTaGTGGGAAGCTCACTCTTTC +
Preference number: 4 (lower is better)
Translates to: QPIPTPQPYCLLWPPYPFLAHLQ*WEAHSF
Trigger: GAAAGAGTGAGCTTCCCATCACTGCAGATGAGCCAG...AAATGGATATGGTGGCCATAAGAGGCAGTATGGTTGGGGAGTGGGGATGGGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR TCA 90 bp GACCCATCAGACTTCCTAGAGCTGCCTGTGGTCAAGATTAGAAGAGGAGGCATCATCTGTTGCCGTACATaGGGGTCTCACCTGCAGTTG +
Preference number: 4 (lower is better)
Translates to: DPSDFLELPVVKIRRGGIICCRT*GSHLQL
Trigger: CAACTGCAGGTGAGACCCTCATGTACGGCAACAGAT...GATGCCTCCTCTTCTAATCTTGACCACAGGCAGCTCTAGGAAGTCTGATGGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR TCA 90 bp GAGAGAGTGAGGGAGTGGGAACTGGCCTCCATAGGCATAGTCAGAGTTTTGCACGAATGTTCTGACACATaGGGTGCCCTGGCATCTGTT +
Preference number: 4 (lower is better)
Translates to: ERVREWELASIGIVRVLHECSDT*GALASV
Trigger: AACAGATGCCAGGGCACCTCATGTGTCAGAACATTC...GTGCAAAACTCTGACTATGCCTATGGAGGCCAGTTCCCACTCCCTCACTCTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR GCA 90 bp GTGCCAGGCATGATGCTCAGTGCTTCATTGTCTTGTTTCATTGTCTCGACCATATCTATGCCCAGCCCATaGCGTTTGCCCTGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: VPGMMLSASLSCFIVSTISMPSP*RLPWLQ
Trigger: CTGGAGCCAGGGCAAACGGCATGGGCTGGGCATAGA...TATGGTCGAGACAATGAAACAAGACAATGAAGCACTGAGCATCATGCCTGGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342272.3
CDS-3UTR GCA 90 bp AGAGTCCTGCAGAGACCTCAAGGCAGTGGGCCAGCATTGCTTTTAAGTTCATGCCTTGTCTTCAACACCTaGCTTAGTGTCTGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: RVLQRPQGSGPALLLSSCLVFNT*LSVCPR
Trigger: CCTGGGGCAGACACTAAGGCAGGTGTTGAAGACAAG...GCATGAACTTAAAAGCAATGCTGGCCCACTGCCTTGAGGTCTCTGCAGGACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR GCA 90 bp GGGAAGCTAACTGGACTGGTGGGAGGAGACAGAGCACTGTGTTCTGGGATATTCAAAGGGGCTTATAACTaGACCCAGGCTGTACCCAGT +
Preference number: 4 (lower is better)
Translates to: GKLTGLVGGDRALCSGIFKGAYN*TQAVPS
Trigger: ACTGGGTACAGCCTGGGTGCAGTTATAAGCCCCTTT...GAATATCCCAGAACACAGTGCTCTGTCTCCTCCCACCAGTCCAGTTAGCTTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR GCA 90 bp GAGAGAGTGAGGGAGTGGGAACTGGCCTCCATAGGCATAGTCAGAGTTTTGCACGAGCCCGTGAGCAGATaGGGGTTTATTATTGCACAG +
Preference number: 4 (lower is better)
Translates to: ERVREWELASIGIVRVLHEPVSR*GFIIAQ
Trigger: CTGTGCAATAATAAACCCGCATCTGCTCACGGGCTC...GTGCAAAACTCTGACTATGCCTATGGAGGCCAGTTCCCACTCCCTCACTCTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR GCA 90 bp GAAGGAGCCCAGGACATTCCATTCCTCTTGGCACCACCACCGCCACCCAGCACAACACCATGGAGATACTaGGAAGAATGGAAAATAGCA +
Preference number: 4 (lower is better)
Translates to: EGAQDIPFLLAPPPPPSTTPWRY*EEWKIA
Trigger: TGCTATTTTCCATTCTTCGCAGTATCTCCATGGTGT...TGTGCTGGGTGGCGGTGGTGGTGCCAAGAGGAATGGAATGTCCTGGGCTCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR GCA 90 bp CAACCCATCCCCACTCCCCAACCATACTGCCTCTTATGGCCACCATATCCATTTCTCAGCTGGCTCATCTaGAGTGATGGGAAGCTCACT +
Preference number: 4 (lower is better)
Translates to: QPIPTPQPYCLLWPPYPFLSWLI*SDGKLT
Trigger: AGTGAGCTTCCCATCACTGCAGATGAGCCAGCTGAG...AAATGGATATGGTGGCCATAAGAGGCAGTATGGTTGGGGAGTGGGGATGGGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR GCA 90 bp AGCCAGGCTCCTGAGGACAGGGTGTGCCTGAACTCGAGCCTACTGTTGGTTGAGAGCAGAAGTGATGTGTaGTGTTTTCCTGGTGAAAGT +
Preference number: 4 (lower is better)
Translates to: SQAPEDRVCLNSSLLLVESRSDV*CFPGES
Trigger: ACTTTCACCAGGAAAACAGCACACATCACTTCTGCT...CTCAACCAACAGTAGGCTCGAGTTCAGGCACACCCTGTCCTCAGGAGCCTGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CCA 90 bp TCCTATGTGCCAGGCATGATGCTCAGTGCTTCATTGTCTTGTTTCATTGTCTCGAGAGCCAGCGCCCCTTaGTCTCTATGCCCAGCCCAT +
Preference number: 4 (lower is better)
Translates to: SYVPGMMLSASLSCFIVSRASAP*SLCPAH
Trigger: ATGGGCTGGGCATAGAGACCAAGGGGCGCTGGCTCT...CGAGACAATGAAACAAGACAATGAAGCACTGAGCATCATGCCTGGCACATAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342272.3
CDS-3UTR CCA 90 bp GACCCATCAGACTTCCTAGAGCTGCCTGTGGTCAAGATTAGAAGAGGAGGCATCGGTGAACAAAGAGGATaGCCAGGCCGATGTTCAGCA +
Preference number: 4 (lower is better)
Translates to: DPSDFLELPVVKIRRGGIGEQRG*PGRCSA
Trigger: TGCTGAACATCGGCCTGGCCATCCTCTTTGTTCACC...GATGCCTCCTCTTCTAATCTTGACCACAGGCAGCTCTAGGAAGTCTGATGGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CCA 90 bp AGAGTCCTGCAGAGACCTCAAGGCAGTGGGCCAGCATTGCTTTTAAGTTCATGCTGCTCTAAGCCTCTGTaGAATGTGGCGATCCCCTCA +
Preference number: 4 (lower is better)
Translates to: RVLQRPQGSGPALLLSSCCSKPL*NVAIPS
Trigger: TGAGGGGATCGCCACATTCCACAGAGGCTTAGAGCA...GCATGAACTTAAAAGCAATGCTGGCCCACTGCCTTGAGGTCTCTGCAGGACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CCA 90 bp TCTTTAAGTGAGGTACATCCAAGTAGCCATCTTCTACCAAGTAAGCCAAAGGGGGTGATAGGGCTGGGTTaGGTAGGGGAGCCAGGCTCC +
Preference number: 4 (lower is better)
Translates to: SLSEVHPSSHLLPSKPKGVIGLG*VGEPGS
Trigger: GGAGCCTGGCTCCCCTACCCAACCCAGCCCTATCAC...CCCCTTTGGCTTACTTGGTAGAAGATGGCTACTTGGATGTACCTCACTTAAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CCA 90 bp ATTCCTAAAAAGTCAAGAGAACTGCTTTCCTGCCACCAACTTGCTGTGTGCGTGGAGGAGGCATCGGCCTaGCTGTGTCCTACCCTTGAG +
Preference number: 4 (lower is better)
Translates to: IPKKSRELLSCHQLAVCVEEASA*LCPTLE
Trigger: CTCAAGGGTAGGACACAGCCAGGCCGATGCCTCCTC...CACGCACACAGCAAGTTGGTGGCAGGAAAGCAGTTCTCTTGACTTTTTAGGAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CCA 90 bp GACCCATCAGACTTCCTAGAGCTGCCTGTGGTCAAGATTAGAAGAGGAGGCATCAATGCATTCCGGGCATaGCAGGAGACCCATCAGACT +
Preference number: 4 (lower is better)
Translates to: DPSDFLELPVVKIRRGGINAFRA*QETHQT
Trigger: AGTCTGATGGGTCTCCTGCCATGCCCGGAATGCATT...GATGCCTCCTCTTCTAATCTTGACCACAGGCAGCTCTAGGAAGTCTGATGGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CCA 90 bp GGCCCTGATGGGGGAGGAGACAAGCCATTTCACAGGGCATCACAGGAGATTTCTACTCACAGTTCCAAGTaGCTAGGGAAGCCTCACAAT +
Preference number: 4 (lower is better)
Translates to: GPDGGGDKPFHRASQEISTHSSK*LGKPHN
Trigger: ATTGTGAGGCTTCCCTAGCCACTTGGAACTGTGAGT...AGAAATCTCCTGTGATGCCCTGTGAAATGGCTTGTCTCCTCCCCCATCAGGGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR TCA 90 bp TCCTATGTGCCAGGCATGATGCTCAGTGCTTCATTGTCTTGTTTCATTGTCTCGTCCAGCCTCCATGTGTaGCTCCAGCTCTACCCCATC +
Preference number: 4 (lower is better)
Translates to: SYVPGMMLSASLSCFIVSSSLHV*LQLYPI
Trigger: GATGGGGTAGAGCTGGAGTCACACATGGAGGCTGGA...CGAGACAATGAAACAAGACAATGAAGCACTGAGCATCATGCCTGGCACATAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342272.3
CDS-3UTR TCA 90 bp CCAATCAGTGATGGCATCTTCCACATACAGCAAAGAAGTGATATAGCCAGGATTGGCGCATGCCGTTGGTaGACTGGCCTTGGTACGTCC +
Preference number: 4 (lower is better)
Translates to: PISDGIFHIQQRSDIARIGACRW*TGLGTS
Trigger: GGACGTACCAAGGCCAGTTCACCAACGGCATGCGCC...AATCCTGGCTATATCACTTCTTTGCTGTATGTGGAAGATGCCATCACTGATTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR TCA 90 bp ATTCCTAAAAAGTCAAGAGAACTGCTTTCCTGCCACCAACTTGCTGTGTGCGTGCTGCCACATCCCTGTTaGCTAGCATCTCCCCTCAGC +
Preference number: 4 (lower is better)
Translates to: IPKKSRELLSCHQLAVCVLPHPC*LASPLS
Trigger: GCTGAGGGGAGATGCTAGTCAACAGGGATGTGGCAG...CACGCACACAGCAAGTTGGTGGCAGGAAAGCAGTTCTCTTGACTTTTTAGGAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR GCA 90 bp CCAATCAGTGATGGCATCTTCCACATACAGCAAAGAAGTGATATAGCCAGGATTGGCGTGGGTGATGCCTaGAACACTCCTCCAGTGCCC +
Preference number: 4 (lower is better)
Translates to: PISDGIFHIQQRSDIARIGVGDA*NTPPVP
Trigger: GGGCACTGGAGGAGTGTTGCAGGCATCACCCACGCC...AATCCTGGCTATATCACTTCTTTGCTGTATGTGGAAGATGCCATCACTGATTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR GCA 90 bp TCTTTAAGTGAGGTACATCCAAGTAGCCATCTTCTACCAAGTAAGCCAAAGGGGTCTATGCCCAGCCCATaGCGTTTGCCCTGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: SLSEVHPSSHLLPSKPKGSMPSP*RLPWLQ
Trigger: CTGGAGCCAGGGCAAACGGCATGGGCTGGGCATAGA...CCCCTTTGGCTTACTTGGTAGAAGATGGCTACTTGGATGTACCTCACTTAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR GCA 90 bp CGAAATGGAATCATGTCTGGCATGGATTCCATCTACACTGGCAGGACTCAAGGCAGAATGCCCAGAAGCTaGCAAGACAGCAGCTCAGCT +
Preference number: 4 (lower is better)
Translates to: RNGIMSGMDSIYTGRTQGRMPRS*QDSSSA
Trigger: AGCTGAGCTGCTGTCTTGGCAGCTTCTGGGCATTCT...GCCTTGAGTCCTGCCAGTGTAGATGGAATCCATGCCAGACATGATTCCATTTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342272.3
CDS-3UTR GCA 90 bp TCCTATGTGCCAGGCATGATGCTCAGTGCTTCATTGTCTTGTTTCATTGTCTCGGGACAGGGGCACGTCTaGAGAGATTTGGCCAATCGG +
Preference number: 4 (lower is better)
Translates to: SYVPGMMLSASLSCFIVSGQGHV*RDLANR
Trigger: CCGATTGGCCAAATCTCTGCAGACGTGCCCCTGTCC...CGAGACAATGAAACAAGACAATGAAGCACTGAGCATCATGCCTGGCACATAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342272.3
CDS-3UTR GCA 90 bp GGGAAGCTAACTGGACTGGTGGGAGGAGACAGAGCACTGTGTTCTGGGATATTCACAAACCACCTTAAATaGATTCCGGGCATGGCAGGA +
Preference number: 4 (lower is better)
Translates to: GKLTGLVGGDRALCSGIFTNHLK*IPGMAG
Trigger: TCCTGCCATGCCCGGAATGCATTTAAGGTGGTTTGT...GAATATCCCAGAACACAGTGCTCTGTCTCCTCCCACCAGTCCAGTTAGCTTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR GCA 90 bp GAAGGAGCCCAGGACATTCCATTCCTCTTGGCACCACCACCGCCACCCAGCACATCAATTTTCCTCATCTaGAAAATGGGTGGACGAATA +
Preference number: 4 (lower is better)
Translates to: EGAQDIPFLLAPPPPPSTSIFLI*KMGGRI
Trigger: TATTCGTCCACCCATTTTGCAGATGAGGAAAATTGA...TGTGCTGGGTGGCGGTGGTGGTGCCAAGAGGAATGGAATGTCCTGGGCTCCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR GCA 90 bp GACCCATCAGACTTCCTAGAGCTGCCTGTGGTCAAGATTAGAAGAGGAGGCATCGTGACTGTATACCATTaGACTCCAGCCTGGGTGACA +
Preference number: 4 (lower is better)
Translates to: DPSDFLELPVVKIRRGGIVTVYH*TPAWVT
Trigger: TGTCACCCAGGCTGGAGTGCAATGGTATACAGTCAC...GATGCCTCCTCTTCTAATCTTGACCACAGGCAGCTCTAGGAAGTCTGATGGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR GCA 90 bp GAGAGAGTGAGGGAGTGGGAACTGGCCTCCATAGGCATAGTCAGAGTTTTGCACAGTGAGTGCTGGCCATaGCAGAAAAATCAACCACAG +
Preference number: 4 (lower is better)
Translates to: ERVREWELASIGIVRVLHSECWP*QKNQPQ
Trigger: CTGTGGTTGATTTTTCTGGCATGGCCAGCACTCACT...GTGCAAAACTCTGACTATGCCTATGGAGGCCAGTTCCCACTCCCTCACTCTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CCA 90 bp CCAATCAGTGATGGCATCTTCCACATACAGCAAAGAAGTGATATAGCCAGGATTGCTTTGGCCTTGGCGTaGCTTGTCCTGGAGGCGGCA +
Preference number: 4 (lower is better)
Translates to: PISDGIFHIQQRSDIARIALALA*LVLEAA
Trigger: TGCCGCCTCCAGGACAAGCCACGCCAAGGCCAAAGC...AATCCTGGCTATATCACTTCTTTGCTGTATGTGGAAGATGCCATCACTGATTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CCA 90 bp CCAAGCCCATCCTTCCTGGAATCCCAGCATCATTCCAGAGTTTTGAAAACTTTTTGTTGGACTCCTGGTTaGCAGCCAGGGCGGCCTGTT +
Preference number: 4 (lower is better)
Translates to: PSPSFLESQHHSRVLKTFCWTPG*QPGRPV
Trigger: AACAGGCCGCCCTGGCTGCCAACCAGGAGTCCAACA...AAAAGTTTTCAAAACTCTGGAATGATGCTGGGATTCCAGGAAGGATGGGCTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CCA 90 bp GGGAAGCTAACTGGACTGGTGGGAGGAGACAGAGCACTGTGTTCTGGGATATTCCTCCTGAAACTCTTGTaGGGTGAATGTGAACTGGAC +
Preference number: 4 (lower is better)
Translates to: GKLTGLVGGDRALCSGIFLLKLL*GECELD
Trigger: GTCCAGTTCACATTCACCCCACAAGAGTTTCAGGAG...GAATATCCCAGAACACAGTGCTCTGTCTCCTCCCACCAGTCCAGTTAGCTTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CCA 90 bp TCTTTAAGTGAGGTACATCCAAGTAGCCATCTTCTACCAAGTAAGCCAAAGGGGCAGGCTGTACCCAGTTaGAGCCCCAGACTTGCCCCT +
Preference number: 4 (lower is better)
Translates to: SLSEVHPSSHLLPSKPKGQAVPS*SPRLAP
Trigger: AGGGGCAAGTCTGGGGCTCCAACTGGGTACAGCCTG...CCCCTTTGGCTTACTTGGTAGAAGATGGCTACTTGGATGTACCTCACTTAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CCA 90 bp GGGAAGCTAACTGGACTGGTGGGAGGAGACAGAGCACTGTGTTCTGGGATATTCACTGTAGAAGCTCTATaGTCTTTCAGCCCCCACTCA +
Preference number: 4 (lower is better)
Translates to: GKLTGLVGGDRALCSGIFTVEAL*SFSPHS
Trigger: TGAGTGGGGGCTGAAAGACCATAGAGCTTCTACAGT...GAATATCCCAGAACACAGTGCTCTGTCTCCTCCCACCAGTCCAGTTAGCTTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CCA 90 bp GGGACAATGGGGATGGTACTACAGGCTGTACTGTCTTGTCTGTTTACCAAAACCTCACCTCCATCCCTTTaGGGTCCCTGGGATCCTCTA +
Preference number: 4 (lower is better)
Translates to: GTMGMVLQAVLSCLFTKTSPPSL*GPWDPL
Trigger: TAGAGGATCCCAGGGACCCCAAAGGGATGGAGGTGA...GGTTTTGGTAAACAGACAAGACAGTACAGCCTGTAGTACCATCCCCATTGTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CCA 90 bp AGAGTCCTGCAGAGACCTCAAGGCAGTGGGCCAGCATTGCTTTTAAGTTCATGCGAGACCTCAAGGCAGTaGGCCAGCATTGCTTTTAAG +
Preference number: 4 (lower is better)
Translates to: RVLQRPQGSGPALLLSSCETSRQ*ASIAFK
Trigger: CTTAAAAGCAATGCTGGCCCACTGCCTTGAGGTCTC...GCATGAACTTAAAAGCAATGCTGGCCCACTGCCTTGAGGTCTCTGCAGGACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CCA 90 bp GACCCATCAGACTTCCTAGAGCTGCCTGTGGTCAAGATTAGAAGAGGAGGCATCAAAAGAGCACAGCTCTaGGTTTCAGTCCCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: DPSDFLELPVVKIRRGGIKRAQL*VSVPAL
Trigger: CAGAGCTGGGACTGAAACCCAGAGCTGTGCTCTTTT...GATGCCTCCTCTTCTAATCTTGACCACAGGCAGCTCTAGGAAGTCTGATGGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CCA 90 bp GGCCCTGATGGGGGAGGAGACAAGCCATTTCACAGGGCATCACAGGAGATTTCTCAAACAACTGAGCTCTaGCTAGTGGAATATGAGCAG +
Preference number: 4 (lower is better)
Translates to: GPDGGGDKPFHRASQEISQTTEL*LVEYEQ
Trigger: CTGCTCATATTCCACTAGCCAGAGCTCAGTTGTTTG...AGAAATCTCCTGTGATGCCCTGTGAAATGGCTTGTCTCCTCCCCCATCAGGGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CCA 90 bp AGAGTCCTGCAGAGACCTCAAGGCAGTGGGCCAGCATTGCTTTTAAGTTCATGCGAAGCCTCACAATCATaGTGGAAGACAAGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: RVLQRPQGSGPALLLSSCEASQS*WKTRRS
Trigger: GCTCCTCCTTGTCTTCCACCATGATTGTGAGGCTTC...GCATGAACTTAAAAGCAATGCTGGCCCACTGCCTTGAGGTCTCTGCAGGACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR CAA 72 bp TATGACTCCCCGCTCAGTCCAGGCTCTGTCACTGACTaGCTGTGTGATCCTTACAAATCACGACACTCTCTC +
Preference number: 4 (lower is better)
Translates to: YDSPLSPGSVTD*LCDPYKSRHSL
Trigger: GAGAGAGTGTCGTGATTTGTAAGGATCACACAGCAAGTCAGTGACAGAGCCTGGACTGAGCGGGGAGTCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR TCA 90 bp CAACCCATCCCCACTCCCCAACCATACTGCCTCTTATGGCCACCATATCCATTTCCGGGAAATGCTTCTTaGCAAGCAGCTTGTCTTCAA +
Preference number: 4 (lower is better)
Translates to: QPIPTPQPYCLLWPPYPFPGNAS*QAACLQ
Trigger: TTGAAGACAAGCTGCTTGTCAAGAAGCATTTCCCGG...AAATGGATATGGTGGCCATAAGAGGCAGTATGGTTGGGGAGTGGGGATGGGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR TCA 90 bp GGGACAATGGGGATGGTACTACAGGCTGTACTGTCTTGTCTGTTTACCAAAACCCAAGGTCCACAGAAATaGAGGGAGGACAGCAGCAGT +
Preference number: 4 (lower is better)
Translates to: GTMGMVLQAVLSCLFTKTQGPQK*REDSSS
Trigger: ACTGCTGCTGTCCTCCCTTCATTTCTGTGGACCTTG...GGTTTTGGTAAACAGACAAGACAGTACAGCCTGTAGTACCATCCCCATTGTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR TCA 90 bp GGGAAGCTAACTGGACTGGTGGGAGGAGACAGAGCACTGTGTTCTGGGATATTCGAGTGCCTCCATCTCTaGCAACCTAAGGAGTTATTT +
Preference number: 4 (lower is better)
Translates to: GKLTGLVGGDRALCSGIFECLHL*QPKELF
Trigger: AAATAACTCCTTAGGTTGTCAGAGATGGAGGCACTC...GAATATCCCAGAACACAGTGCTCTGTCTCCTCCCACCAGTCCAGTTAGCTTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR TCA 90 bp CAACCCATCCCCACTCCCCAACCATACTGCCTCTTATGGCCACCATATCCATTTCAAGACAGCCTGGAGTaGATGGTGAATGTTCTGACA +
Preference number: 4 (lower is better)
Translates to: QPIPTPQPYCLLWPPYPFQDSLE*MVNVLT
Trigger: TGTCAGAACATTCACCATTCACTCCAGGCTGTCTTG...AAATGGATATGGTGGCCATAAGAGGCAGTATGGTTGGGGAGTGGGGATGGGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR TCA 90 bp AGAGTCCTGCAGAGACCTCAAGGCAGTGGGCCAGCATTGCTTTTAAGTTCATGCCAGCCTCAAGATTGCTaGCTTTACAGCCTCAAGATG +
Preference number: 4 (lower is better)
Translates to: RVLQRPQGSGPALLLSSCQPQDC*LYSLKM
Trigger: CATCTTGAGGCTGTAAAGTCAGCAATCTTGAGGCTG...GCATGAACTTAAAAGCAATGCTGGCCCACTGCCTTGAGGTCTCTGCAGGACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR TCA 90 bp GACCCATCAGACTTCCTAGAGCTGCCTGTGGTCAAGATTAGAAGAGGAGGCATCTCAATAAGCACTCACTaGATGTCTACTCTGCCCCGA +
Preference number: 4 (lower is better)
Translates to: DPSDFLELPVVKIRRGGISISTH*MSTLPR
Trigger: TCGGGGCAGAGTAGACATTCAGTGAGTGCTTATTGA...GATGCCTCCTCTTCTAATCTTGACCACAGGCAGCTCTAGGAAGTCTGATGGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR TCA 90 bp AGCCAGGCTCCTGAGGACAGGGTGTGCCTGAACTCGAGCCTACTGTTGGTTGAGTCCTTTCACAGGTTTTaGTCCCTAATAAACATCTTG +
Preference number: 4 (lower is better)
Translates to: SQAPEDRVCLNSSLLLVESFHRF*SLINIL
Trigger: CAAGATGTTTATTAGGGATCAAAACCTGTGAAAGGA...CTCAACCAACAGTAGGCTCGAGTTCAGGCACACCCTGTCCTCAGGAGCCTGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR GCA 90 bp TTCCTATGTGCCAGGCATGATGCTCAGTGCTTCATTGTCTTGTTTCATTGTCTCCTAGCACACCTGGGCTaGTCTGTGGATTCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: FLCARHDAQCFIVLFHCLLAHLG*SVDSAR
Trigger: CCTGGCAGAATCCACAGAGCAGCCCAGGTGTGCTAG...GAGACAATGAAACAAGACAATGAAGCACTGAGCATCATGCCTGGCACATAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342272.3
CDS-3UTR GCA 90 bp AGAGTCCTGCAGAGACCTCAAGGCAGTGGGCCAGCATTGCTTTTAAGTTCATGCTCTCTTGCCGGGAAATaGTTCTTGACAAGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: RVLQRPQGSGPALLLSSCSLAGK*FLTSSL
Trigger: CAAGCTGCTTGTCAAGAAGCATTTCCCGGCAAGAGA...GCATGAACTTAAAAGCAATGCTGGCCCACTGCCTTGAGGTCTCTGCAGGACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR GCA 90 bp GGGACAGGAGCAGATCAGGAAGCTCAAGAGACCAGGGCGCTTCTCTCTGGGCTCAAGTTTCTGGAAGTTTaGTTTAGAAACTCCACTGTA +
Preference number: 4 (lower is better)
Translates to: GTGADQEAQETRALLSGLKFLEV*FRNSTV
Trigger: TACAGTGGAGTTTCTAAAGCAAACTTCCAGAAACTT...GAGCCCAGAGAGAAGCGCCCTGGTCTCTTGAGCTTCCTGATCTGCTCCTGTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR GCA 90 bp GAAGGAGCCCAGGACATTCCATTCCTCTTGGCACCACCACCGCCACCCAGCACATTGCTTTTAAGTTCATaGATGGTACAAACCACCTTA +
Preference number: 4 (lower is better)
Translates to: EGAQDIPFLLAPPPPPSTLLLSS*MVQTTL
Trigger: TAAGGTGGTTTGTACCATGCATGAACTTAAAAGCAA...TGTGCTGGGTGGCGGTGGTGGTGCCAAGAGGAATGGAATGTCCTGGGCTCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR GCA 90 bp AGCCAGGCTCCTGAGGACAGGGTGTGCCTGAACTCGAGCCTACTGTTGGTTGAGAAAGAGAGGAACTTGTaGAGAGTAACTCCTCTTTTT +
Preference number: 4 (lower is better)
Translates to: SQAPEDRVCLNSSLLLVEKERNL*RVTPLF
Trigger: AAAAAGAGGAGTTACTCTGCACAAGTTCCTCTCTTT...CTCAACCAACAGTAGGCTCGAGTTCAGGCACACCCTGTCCTCAGGAGCCTGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CCA 90 bp GCTGTGCTCTCCTGGGGTCTCCATAGAATGCCCAGAAGCTGCCAAGACAGCAGCATTCTACATTCGAAATaGAATCATGTCTGGCATGGA +
Preference number: 4 (lower is better)
Translates to: AVLSWGLHRMPRSCQDSSILHSK*NHVWHG
Trigger: TCCATGCCAGACATGATTCCATTTCGAATGTAGAAT...GCTGCTGTCTTGGCAGCTTCTGGGCATTCTATGGAGACCCCAGGAGAGCACAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342272.3
CDS-3UTR CCA 90 bp CTGCTCTGTGGATTCTGCCAGGCACAGATCTGTGCCAGGCAACTCTCATCAGTTCTGAAAACAAGGCCGTaGACAGGAAAGACTAATACG +
Preference number: 4 (lower is better)
Translates to: LLCGFCQAQICARQLSSVLKTRP*TGKTNT
Trigger: CGTATTAGTCTTTCCTGTCCACGGCCTTGTTTTCAG...AACTGATGAGAGTTGCCTGGCACAGATCTGTGCCTGGCAGAATCCACAGAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342272.3
CDS-3UTR CCA 90 bp GGGACAATGGGGATGGTACTACAGGCTGTACTGTCTTGTCTGTTTACCAAAACCCTGTGCTCCACTTTCTaGCGGACCTTGTTGCTCTTG +
Preference number: 4 (lower is better)
Translates to: GTMGMVLQAVLSCLFTKTLCSTF*RTLLLL
Trigger: CAAGAGCAACAAGGTCCGCCAGAAAGTGGAGCACAG...GGTTTTGGTAAACAGACAAGACAGTACAGCCTGTAGTACCATCCCCATTGTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CCA 90 bp ATTCCTAAAAAGTCAAGAGAACTGCTTTCCTGCCACCAACTTGCTGTGTGCGTGGACAGGTCTCTGTGCTaGTCTGAGGGGGTCTCAACA +
Preference number: 4 (lower is better)
Translates to: IPKKSRELLSCHQLAVCVDRSLC*SEGVST
Trigger: TGTTGAGACCCCCTCAGACCAGCACAGAGACCTGTC...CACGCACACAGCAAGTTGGTGGCAGGAAAGCAGTTCTCTTGACTTTTTAGGAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CCA 90 bp GAGAGAGTGAGGGAGTGGGAACTGGCCTCCATAGGCATAGTCAGAGTTTTGCACAAGAGGCAGGTAACATaGTATTCATCACCCCCAGAA +
Preference number: 4 (lower is better)
Translates to: ERVREWELASIGIVRVLHKRQVT*YSSPPE
Trigger: TTCTGGGGGTGATGAATACCATGTTACCTGCCTCTT...GTGCAAAACTCTGACTATGCCTATGGAGGCCAGTTCCCACTCCCTCACTCTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CCA 90 bp CTAGCATCCCAAGCACACGGGAAACCCCAAATGCAATCCCAGTCTCAGACACACTCCTCATCTGCAAAATaGGTGGACGAATACCTACAC +
Preference number: 4 (lower is better)
Translates to: LASQAHGKPQMQSQSQTHSSSAK*VDEYLH
Trigger: GTGTAGGTATTCGTCCACCCATTTTGCAGATGAGGA...GTGTGTCTGAGACTGGGATTGCATTTGGGGTTTCCCGTGTGCTTGGGATGCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CCA 90 bp CCAAGCCCATCCTTCCTGGAATCCCAGCATCATTCCAGAGTTTTGAAAACTTTTGCATCTCCCCTCAGCTaGCTCATCTGCAGTGATGGG +
Preference number: 4 (lower is better)
Translates to: PSPSFLESQHHSRVLKTFASPLS*LICSDG
Trigger: CCCATCACTGCAGATGAGCCAGCTGAGGGGAGATGC...AAAAGTTTTCAAAACTCTGGAATGATGCTGGGATTCCAGGAAGGATGGGCTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CCA 90 bp CTAGCATCCCAAGCACACGGGAAACCCCAAATGCAATCCCAGTCTCAGACACACTATGTCCCTTTCCCTTaGCTGGTTCTGATTCGCATT +
Preference number: 4 (lower is better)
Translates to: LASQAHGKPQMQSQSQTHYVPFP*LVLIRI
Trigger: AATGCGAATCAGAACCAGCCAAGGGAAAGGGACATA...GTGTGTCTGAGACTGGGATTGCATTTGGGGTTTCCCGTGTGCTTGGGATGCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CCA 90 bp GGGACAATGGGGATGGTACTACAGGCTGTACTGTCTTGTCTGTTTACCAAAACCTCAATTACCTCCCACTaGGTCCCTCCCACAACGTGT +
Preference number: 4 (lower is better)
Translates to: GTMGMVLQAVLSCLFTKTSITSH*VPPTTC
Trigger: ACACGTTGTGGGAGGGACCCAGTGGGAGGTAATTGA...GGTTTTGGTAAACAGACAAGACAGTACAGCCTGTAGTACCATCCCCATTGTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR CAA 72 bp TCAGTCCCAGCTCTGTCCTTCCCTCTCTGTGATACCTaGAACCAATCACTCCATCTCCCCAAGGCTCAATTT +
Preference number: 4 (lower is better)
Translates to: SVPALSFPLCDT*NQSLHLPKAQF
Trigger: AAATTGAGCCTTGGGGAGATGGAGTGATTGGTTCAAGGTATCACAGAGAGGGAAGGACAGAGCTGGGACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR CAA 72 bp ATAAAAGCCCAATGGGAGATGCTCTACAAGCAATCCTaGCTCTGGAGCTCCCACTGGGTTGGACTTTGTCAG +
Preference number: 4 (lower is better)
Translates to: IKAQWEMLYKQS*LWSSHWVGLCQ
Trigger: CTGACAAAGTCCAACCCAGTGGGAGCTCCAGAGCAAGGATTGCTTGTAGAGCATCTCCCATTGGGCTTTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR TCA 90 bp TCCTATGTGCCAGGCATGATGCTCAGTGCTTCATTGTCTTGTTTCATTGTCTCGAGGGCCCTCAGAAAATaGGACTCGGCATTCCTCATG +
Preference number: 4 (lower is better)
Translates to: SYVPGMMLSASLSCFIVSRALRK*DSAFLM
Trigger: CATGAGGAATGCCGAGTCTCATTTTCTGAGGGCCCT...CGAGACAATGAAACAAGACAATGAAGCACTGAGCATCATGCCTGGCACATAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342272.3
CDS-3UTR TCA 90 bp CCAATCAGTGATGGCATCTTCCACATACAGCAAAGAAGTGATATAGCCAGGATTCCGTGGGAGGCCTCCTaGAACTCTTGTGGGGTGAAT +
Preference number: 4 (lower is better)
Translates to: PISDGIFHIQQRSDIARIPWEAS*NSCGVN
Trigger: ATTCACCCCACAAGAGTTTCAGGAGGCCTCCCACGG...AATCCTGGCTATATCACTTCTTTGCTGTATGTGGAAGATGCCATCACTGATTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR TCA 90 bp CCAAGCCCATCCTTCCTGGAATCCCAGCATCATTCCAGAGTTTTGAAAACTTTTCTTGTATCTGGGGTCTaGAGGGAGAGGGGGAGATTG +
Preference number: 4 (lower is better)
Translates to: PSPSFLESQHHSRVLKTFLVSGV*RERGRL
Trigger: CAATCTCCCCCTCTCCCTTCAGACCCCAGATACAAG...AAAAGTTTTCAAAACTCTGGAATGATGCTGGGATTCCAGGAAGGATGGGCTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR TCA 90 bp GGGACAATGGGGATGGTACTACAGGCTGTACTGTCTTGTCTGTTTACCAAAACCCTTGAGGGAGAGGTCTaGTTTTTGTCCTGGCTCCTA +
Preference number: 4 (lower is better)
Translates to: GTMGMVLQAVLSCLFTKTLEGEV*FLSWLL
Trigger: TAGGAGCCAGGACAAAAATCAGACCTCTCCCTCAAG...GGTTTTGGTAAACAGACAAGACAGTACAGCCTGTAGTACCATCCCCATTGTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR GCA 90 bp TCTTTAAGTGAGGTACATCCAAGTAGCCATCTTCTACCAAGTAAGCCAAAGGGGGTGCAGGGTGCAGACTaGACAAGGACAGGTCTCTGT +
Preference number: 4 (lower is better)
Translates to: SLSEVHPSSHLLPSKPKGVQGAD*TRTGLC
Trigger: ACAGAGACCTGTCCTTGTGCAGTCTGCACCCTGCAC...CCCCTTTGGCTTACTTGGTAGAAGATGGCTACTTGGATGTACCTCACTTAAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR GCA 90 bp CCAAGCCCATCCTTCCTGGAATCCCAGCATCATTCCAGAGTTTTGAAAACTTTTTTCCATGGGCTTCTGTaGTCCCCTGAGCTTTCGGTG +
Preference number: 4 (lower is better)
Translates to: PSPSFLESQHHSRVLKTFFHGLL*SPELSV
Trigger: CACCGAAAGCTCAGGGGAGCACAGAAGCCCATGGAA...AAAAGTTTTCAAAACTCTGGAATGATGCTGGGATTCCAGGAAGGATGGGCTTGG
49% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR GCA 90 bp CCAAGCCCATCCTTCCTGGAATCCCAGCATCATTCCAGAGTTTTGAAAACTTTTTCACCCAGGCTGGAGTaGAGTGGCTTGATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: PSPSFLESQHHSRVLKTFSPRLE*SGLILA
Trigger: AGCCAAGATCAAGCCACTGCACTCCAGCCTGGGTGA...AAAAGTTTTCAAAACTCTGGAATGATGCTGGGATTCCAGGAAGGATGGGCTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR GCA 90 bp ATTCCTAAAAAGTCAAGAGAACTGCTTTCCTGCCACCAACTTGCTGTGTGCGTGGGAAGCCGCCTCCTTTaGACACCATCCAAAGTGAGT +
Preference number: 4 (lower is better)
Translates to: IPKKSRELLSCHQLAVCVGSRLL*TPSKVS
Trigger: ACTCACTTTGGATGGTGTGCAAAGGAGGCGGCTTCC...CACGCACACAGCAAGTTGGTGGCAGGAAAGCAGTTCTCTTGACTTTTTAGGAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CCA 90 bp CCAAGCCCATCCTTCCTGGAATCCCAGCATCATTCCAGAGTTTTGAAAACTTTTAGGTGCCCTCATACTTaGCACCGCTGCTTGAGCTCT +
Preference number: 4 (lower is better)
Translates to: PSPSFLESQHHSRVLKTFRCPHT*HRCLSS
Trigger: AGAGCTCAAGCAGCGGTGCCAAGTATGAGGGCACCT...AAAAGTTTTCAAAACTCTGGAATGATGCTGGGATTCCAGGAAGGATGGGCTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CCA 90 bp CCAATCAGTGATGGCATCTTCCACATACAGCAAAGAAGTGATATAGCCAGGATTTTGACCAGCACGTTGTaGCGGTACTTGCCCTCCTCG +
Preference number: 4 (lower is better)
Translates to: PISDGIFHIQQRSDIARILTSTL*RYLPSS
Trigger: CGAGGAGGGCAAGTACCGCCACAACGTGCTGGTCAA...AATCCTGGCTATATCACTTCTTTGCTGTATGTGGAAGATGCCATCACTGATTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CCA 90 bp ATTCCTAAAAAGTCAAGAGAACTGCTTTCCTGCCACCAACTTGCTGTGTGCGTGAGAAGGGAAGCTAACTaGACTGGTGGGAGGAGACAG +
Preference number: 4 (lower is better)
Translates to: IPKKSRELLSCHQLAVCVRREAN*TGGRRQ
Trigger: CTGTCTCCTCCCACCAGTCCAGTTAGCTTCCCTTCT...CACGCACACAGCAAGTTGGTGGCAGGAAAGCAGTTCTCTTGACTTTTTAGGAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CCA 90 bp CCAATCAGTGATGGCATCTTCCACATACAGCAAAGAAGTGATATAGCCAGGATTGCCAGCCCCTCATCCTaGACCCACAAGCACATTGCA +
Preference number: 4 (lower is better)
Translates to: PISDGIFHIQQRSDIARIASPSS*THKHIA
Trigger: TGCAATGTGCTTGTGGGTCCAGGATGAGGGGCTGGC...AATCCTGGCTATATCACTTCTTTGCTGTATGTGGAAGATGCCATCACTGATTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CCA 90 bp CAACCCATCCCCACTCCCCAACCATACTGCCTCTTATGGCCACCATATCCATTTTCAGTTTTTCAGGCATaGCACCTCCAAAGGTCATCA +
Preference number: 4 (lower is better)
Translates to: QPIPTPQPYCLLWPPYPFSVFQA*HLQRSS
Trigger: TGATGACCTTTGGAGGTGCCATGCCTGAAAAACTGA...AAATGGATATGGTGGCCATAAGAGGCAGTATGGTTGGGGAGTGGGGATGGGTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CCA 90 bp CTAGCATCCCAAGCACACGGGAAACCCCAAATGCAATCCCAGTCTCAGACACACGCTTATAGTGAGTGCTaGCCATGCCAGAAAAATCAA +
Preference number: 4 (lower is better)
Translates to: LASQAHGKPQMQSQSQTHAYSEC*PCQKNQ
Trigger: TTGATTTTTCTGGCATGGCCAGCACTCACTATAAGC...GTGTGTCTGAGACTGGGATTGCATTTGGGGTTTCCCGTGTGCTTGGGATGCTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CCA 90 bp GACCCATCAGACTTCCTAGAGCTGCCTGTGGTCAAGATTAGAAGAGGAGGCATCCCATACTGCCTCTTATaGCCACCATATCCATTTCCT +
Preference number: 4 (lower is better)
Translates to: DPSDFLELPVVKIRRGGIPYCLL*PPYPFP
Trigger: AGGAAATGGATATGGTGGCCATAAGAGGCAGTATGG...GATGCCTCCTCTTCTAATCTTGACCACAGGCAGCTCTAGGAAGTCTGATGGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR CAA 72 bp AGAGTCCTGCAGAGACCTCAAGGCAGTGGGCCAGCATaGCTTTTAAGTTCATGCATGGTACAAACCACCTTA +
Preference number: 4 (lower is better)
Translates to: RVLQRPQGSGPA*LLSSCMVQTTL
Trigger: TAAGGTGGTTTGTACCATGCATGAACTTAAAAGCAATGCTGGCCCACTGCCTTGAGGTCTCTGCAGGACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR CAA 72 bp GGAACCCTCCCAGATTCCTTCCTATGTCCCTTTCCCTaGGCTGGTTCTGATTCGCATTCTTTGCTTGTAATC +
Preference number: 4 (lower is better)
Translates to: GTLPDSFLCPFP*AGSDSHSLLVI
Trigger: GATTACAAGCAAAGAATGCGAATCAGAACCAGCCAAGGGAAAGGGACATAGGAAGGAATCTGGGAGGGTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR TCA 90 bp GGGACAATGGGGATGGTACTACAGGCTGTACTGTCTTGTCTGTTTACCAAAACCGTCCTTCCCTCTCTGTaGTACCTTGAACCAATCACT +
Preference number: 4 (lower is better)
Translates to: GTMGMVLQAVLSCLFTKTVLPSL*YLEPIT
Trigger: AGTGATTGGTTCAAGGTATCACAGAGAGGGAAGGAC...GGTTTTGGTAAACAGACAAGACAGTACAGCCTGTAGTACCATCCCCATTGTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR TCA 90 bp CAACCCATCCCCACTCCCCAACCATACTGCCTCTTATGGCCACCATATCCATTTAAGGTCACTAAGAAGTaGCTGTATACCATTGCACTC +
Preference number: 4 (lower is better)
Translates to: QPIPTPQPYCLLWPPYPFKVTKK*LYTIAL
Trigger: GAGTGCAATGGTATACAGTCACTTCTTAGTGACCTT...AAATGGATATGGTGGCCATAAGAGGCAGTATGGTTGGGGAGTGGGGATGGGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR TCA 90 bp GAGAGAGTGAGGGAGTGGGAACTGGCCTCCATAGGCATAGTCAGAGTTTTGCACGTGCTGTTTTCCTGGTaGAAGTTTTTAGGAAGCAAA +
Preference number: 4 (lower is better)
Translates to: ERVREWELASIGIVRVLHVLFSW*KFLGSK
Trigger: TTTGCTTCCTAAAAACTTTCACCAGGAAAACAGCAC...GTGCAAAACTCTGACTATGCCTATGGAGGCCAGTTCCCACTCCCTCACTCTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR TCA 90 bp GGGACAATGGGGATGGTACTACAGGCTGTACTGTCTTGTCTGTTTACCAAAACCCTGGCTAGTGGAATATaGGCAGAAGTGATGTGTGCT +
Preference number: 4 (lower is better)
Translates to: GTMGMVLQAVLSCLFTKTLASGI*AEVMCA
Trigger: AGCACACATCACTTCTGCTCATATTCCACTAGCCAG...GGTTTTGGTAAACAGACAAGACAGTACAGCCTGTAGTACCATCCCCATTGTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR TCA 90 bp GACCCATCAGACTTCCTAGAGCTGCCTGTGGTCAAGATTAGAAGAGGAGGCATCGGTGGGAATTTAAGATaGGATTTGGGTGAGAACACA +
Preference number: 4 (lower is better)
Translates to: DPSDFLELPVVKIRRGGIGGNLR*DLGENT
Trigger: TGTGTTCTCACCCAAATCTCATCTTAAATTCCCACC...GATGCCTCCTCTTCTAATCTTGACCACAGGCAGCTCTAGGAAGTCTGATGGGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR GCA 90 bp TTCCTATGTGCCAGGCATGATGCTCAGTGCTTCATTGTCTTGTTTCATTGTCTCGGGGTCTCCATAGAATaGCCAGAAGCTGCCAAGACA +
Preference number: 4 (lower is better)
Translates to: FLCARHDAQCFIVLFHCLGVSIE*PEAAKT
Trigger: TGTCTTGGCAGCTTCTGGGCATTCTATGGAGACCCC...GAGACAATGAAACAAGACAATGAAGCACTGAGCATCATGCCTGGCACATAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342272.3
CDS-3UTR GCA 90 bp GCAGGACTCAAGGCAGAACTAAGCGAATCAAAGTCTTGTCTTATTTACTGTTCCGCTAAGGGTCTGCTGTaGTCTCCTGGGGTCTCCATA +
Preference number: 4 (lower is better)
Translates to: AGLKAELSESKSCLIYCSAKGLL*SPGVSI
Trigger: TATGGAGACCCCAGGAGAGCACAGCAGACCCTTAGC...GGAACAGTAAATAAGACAAGACTTTGATTCGCTTAGTTCTGCCTTGAGTCCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342272.3
CDS-3UTR GCA 90 bp CCAATCAGTGATGGCATCTTCCACATACAGCAAAGAAGTGATATAGCCAGGATTCACCCTGCCTGGCACTaGAAAAAGACGGGTCCTCAT +
Preference number: 4 (lower is better)
Translates to: PISDGIFHIQQRSDIARIHPAWH*KKTGPH
Trigger: ATGAGGACCCGTCTTTTTGCAGTGCCAGGCAGGGTG...AATCCTGGCTATATCACTTCTTTGCTGTATGTGGAAGATGCCATCACTGATTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CCA 90 bp GGGACAATGGGGATGGTACTACAGGCTGTACTGTCTTGTCTGTTTACCAAAACCCGGGTGTTTAGCATTTaGAACCCTCCCAGATTCCTT +
Preference number: 4 (lower is better)
Translates to: GTMGMVLQAVLSCLFTKTRVFSI*NPPRFL
Trigger: AAGGAATCTGGGAGGGTTCCAAATGCTAAACACCCG...GGTTTTGGTAAACAGACAAGACAGTACAGCCTGTAGTACCATCCCCATTGTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR TCA 90 bp GATTCTACATTCGAAATGGAATCATGTCTGGCATGGATTCCATCTACACTGGCAGGGCACATGAATCACTaGAAACAAGGCCGTGGACAG +
Preference number: 4 (lower is better)
Translates to: DSTFEMESCLAWIPSTLAGHMNH*KQGRGQ
Trigger: CTGTCCACGGCCTTGTTTTCAGTGATTCATGTGCCC...TGCCAGTGTAGATGGAATCCATGCCAGACATGATTCCATTTCGAATGTAGAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342272.3
CDS-3UTR TCA 90 bp TTATTTACTGTTCCAAAGTCAAAAACTCGTTTTTGTCCTCAAATATCCTCCCGAACTCGGCATTCCTCATaGGGGTGTGGAGGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: LFTVPKSKTRFCPQISSRTRHSS*GCGGQG
Trigger: GCCCTGCCCTCCACACCCTCATGAGGAATGCCGAGT...TCGGGAGGATATTTGAGGACAAAAACGAGTTTTTGACTTTGGAACAGTAAATAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000342272.3
CDS-3UTR TCA 90 bp ATTCCTAAAAAGTCAAGAGAACTGCTTTCCTGCCACCAACTTGCTGTGTGCGTGAAGGTTCCCAAGCATTaGAGGGAAATGGGAAAGCTG +
Preference number: 4 (lower is better)
Translates to: IPKKSRELLSCHQLAVCVKVPKH*REMGKL
Trigger: CAGCTTTCCCATTTCCCTTCAATGCTTGGGAACCTT...CACGCACACAGCAAGTTGGTGGCAGGAAAGCAGTTCTCTTGACTTTTTAGGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR TCA 90 bp GGGAAGCTAACTGGACTGGTGGGAGGAGACAGAGCACTGTGTTCTGGGATATTCCTGATTGAGATATTCTaGCTAAACAACTGGTATCTG +
Preference number: 4 (lower is better)
Translates to: GKLTGLVGGDRALCSGIFLIEIF*LNNWYL
Trigger: CAGATACCAGTTGTTTAGTCAGAATATCTCAATCAG...GAATATCCCAGAACACAGTGCTCTGTCTCCTCCCACCAGTCCAGTTAGCTTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR TCA 90 bp CCAAGCCCATCCTTCCTGGAATCCCAGCATCATTCCAGAGTTTTGAAAACTTTTGGGTCCATCAGATTATaGAACTTCCCTTCTTGCCCG +
Preference number: 4 (lower is better)
Translates to: PSPSFLESQHHSRVLKTFGSIRL*NFPSCP
Trigger: CGGGCAAGAAGGGAAGTTTCATAATCTGATGGACCC...AAAAGTTTTCAAAACTCTGGAATGATGCTGGGATTCCAGGAAGGATGGGCTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR TCA 90 bp GAGAGAGTGAGGGAGTGGGAACTGGCCTCCATAGGCATAGTCAGAGTTTTGCACGTATTATTTGTATTCTaGGTCACTTATTTGGGGGAG +
Preference number: 4 (lower is better)
Translates to: ERVREWELASIGIVRVLHVLFVF*VTYLGE
Trigger: CTCCCCCAAATAAGTGACTCAGAATACAAATAATAC...GTGCAAAACTCTGACTATGCCTATGGAGGCCAGTTCCCACTCCCTCACTCTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR GCA 90 bp TTATTTACTGTTCCAAAGTCAAAAACTCGTTTTTGTCCTCAAATATCCTCCCGAGGCGTGGGTGATGCCTaGAACACTCCTCCAGTGCCC +
Preference number: 4 (lower is better)
Translates to: LFTVPKSKTRFCPQISSRGVGDA*NTPPVP
Trigger: GGGCACTGGAGGAGTGTTGCAGGCATCACCCACGCC...TCGGGAGGATATTTGAGGACAAAAACGAGTTTTTGACTTTGGAACAGTAAATAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000342272.3
CDS-3UTR GCA 90 bp CCAATCAGTGATGGCATCTTCCACATACAGCAAAGAAGTGATATAGCCAGGATTGACTTGCCCCTCTCTTaGCGGGAAATGCTTCTTGAC +
Preference number: 4 (lower is better)
Translates to: PISDGIFHIQQRSDIARIDLPLS*REMLLD
Trigger: GTCAAGAAGCATTTCCCGGCAAGAGAGGGGCAAGTC...AATCCTGGCTATATCACTTCTTTGCTGTATGTGGAAGATGCCATCACTGATTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CCA 90 bp GATTCTACATTCGAAATGGAATCATGTCTGGCATGGATTCCATCTACACTGGCATTCTCTCCTACTCTGTaGCTTCAGCTCGGGAAGGGA +
Preference number: 4 (lower is better)
Translates to: DSTFEMESCLAWIPSTLAFSPTL*LQLGKG
Trigger: TCCCTTCCCGAGCTGAAGCCACAGAGTAGGAGAGAA...TGCCAGTGTAGATGGAATCCATGCCAGACATGATTCCATTTCGAATGTAGAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342272.3
CDS-3UTR CCA 90 bp CCAATCAGTGATGGCATCTTCCACATACAGCAAAGAAGTGATATAGCCAGGATTAAGTGCGAGCAATGTTaGACTCCTGGTTGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: PISDGIFHIQQRSDIARIKCEQC*TPGWQP
Trigger: TGGCTGCCAACCAGGAGTCCAACATTGCTCGCACTT...AATCCTGGCTATATCACTTCTTTGCTGTATGTGGAAGATGCCATCACTGATTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CCA 90 bp CCAAGCCCATCCTTCCTGGAATCCCAGCATCATTCCAGAGTTTTGAAAACTTTTTCTCCCCTCGTCTATTaGTCCAGAAGGGAAGCTAAC +
Preference number: 4 (lower is better)
Translates to: PSPSFLESQHHSRVLKTFSPLVY*SRREAN
Trigger: GTTAGCTTCCCTTCTGGACCAATAGACGAGGGGAGA...AAAAGTTTTCAAAACTCTGGAATGATGCTGGGATTCCAGGAAGGATGGGCTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CCA 90 bp AGAGTCCTGCAGAGACCTCAAGGCAGTGGGCCAGCATTGCTTTTAAGTTCATGCCCCAGAGACCTAGTGTaGTACAAAACATCTTTAAGT +
Preference number: 4 (lower is better)
Translates to: RVLQRPQGSGPALLLSSCPRDLV*YKTSLS
Trigger: ACTTAAAGATGTTTTGTACCACACTAGGTCTCTGGG...GCATGAACTTAAAAGCAATGCTGGCCCACTGCCTTGAGGTCTCTGCAGGACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CCA 90 bp TCTTTAAGTGAGGTACATCCAAGTAGCCATCTTCTACCAAGTAAGCCAAAGGGGACTCGAGCCTACTGTTaGTTGAGGGACCTTCTTCTC +
Preference number: 4 (lower is better)
Translates to: SLSEVHPSSHLLPSKPKGTRAYC*LRDLLL
Trigger: GAGAAGAAGGTCCCTCAACCAACAGTAGGCTCGAGT...CCCCTTTGGCTTACTTGGTAGAAGATGGCTACTTGGATGTACCTCACTTAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CCA 90 bp TCTTTAAGTGAGGTACATCCAAGTAGCCATCTTCTACCAAGTAAGCCAAAGGGGTGTAATGTAGGCACCTaGTCAAGACAGCCTGGAGTG +
Preference number: 4 (lower is better)
Translates to: SLSEVHPSSHLLPSKPKGCNVGT*SRQPGV
Trigger: CACTCCAGGCTGTCTTGACCAGGTGCCTACATTACA...CCCCTTTGGCTTACTTGGTAGAAGATGGCTACTTGGATGTACCTCACTTAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR CAA 72 bp CACCATAATCTATCTCATTTGAGCCTCACAACTGCATaGCCTATGAGGAAGACCATGGGGCAGGGATTAGAG +
Preference number: 4 (lower is better)
Translates to: HHNLSHLSLTTA*PMRKTMGQGLE
Trigger: CTCTAATCCCTGCCCCATGGTCTTCCTCATAGGCAATGCAGTTGTGAGGCTCAAATGAGATAGATTATGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR TCA 90 bp GCACATGAATCACTGAAAACAAGGCCGTGGACAGGAAAGACTAATACGGTCCGCTCACCCTTTGGAATGTaGAGGAAATACGGGAATATA +
Preference number: 4 (lower is better)
Translates to: AHESLKTRPWTGKTNTVRSPFGM*RKYGNI
Trigger: TATATTCCCGTATTTCCTTCACATTCCAAAGGGTGA...GCGGACCGTATTAGTCTTTCCTGTCCACGGCCTTGTTTTCAGTGATTCATGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342272.3
CDS-3UTR TCA 90 bp ATTCCTAAAAAGTCAAGAGAACTGCTTTCCTGCCACCAACTTGCTGTGTGCGTGAATGTCCTGGTTAGGTaGCATCTCCCAAAACACACA +
Preference number: 4 (lower is better)
Translates to: IPKKSRELLSCHQLAVCVNVLVR*HLPKHT
Trigger: TGTGTGTTTTGGGAGATGTCACCTAACCAGGACATT...CACGCACACAGCAAGTTGGTGGCAGGAAAGCAGTTCTCTTGACTTTTTAGGAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR TCA 90 bp CCAAGCCCATCCTTCCTGGAATCCCAGCATCATTCCAGAGTTTTGAAAACTTTTGACAGAGCCAAGATTTaGACCAGCAACCATGTTCTG +
Preference number: 4 (lower is better)
Translates to: PSPSFLESQHHSRVLKTFDRAKI*TSNHVL
Trigger: CAGAACATGGTTGCTGGTTCAAATCTTGGCTCTGTC...AAAAGTTTTCAAAACTCTGGAATGATGCTGGGATTCCAGGAAGGATGGGCTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR TCA 90 bp CCAAGCCCATCCTTCCTGGAATCCCAGCATCATTCCAGAGTTTTGAAAACTTTTGGAAACTTCCTTCCCTaGACTCCTTCAGGAATTCTG +
Preference number: 4 (lower is better)
Translates to: PSPSFLESQHHSRVLKTFGNFLP*TPSGIL
Trigger: CAGAATTCCTGAAGGAGTTCAGGGAAGGAAGTTTCC...AAAAGTTTTCAAAACTCTGGAATGATGCTGGGATTCCAGGAAGGATGGGCTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR TCA 90 bp CCAATCAGTGATGGCATCTTCCACATACAGCAAAGAAGTGATATAGCCAGGATTTCCCTTGAAGCTAGTTaGGGCCAAACAACTGAGCTC +
Preference number: 4 (lower is better)
Translates to: PISDGIFHIQQRSDIARISLEAS*GQTTEL
Trigger: GAGCTCAGTTGTTTGGCCTCAACTAGCTTCAAGGGA...AATCCTGGCTATATCACTTCTTTGCTGTATGTGGAAGATGCCATCACTGATTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR GCA 90 bp TTATTTACTGTTCCAAAGTCAAAAACTCGTTTTTGTCCTCAAATATCCTCCCGACCAGCCCATGCCGTTTaGCCTGGCTCCAGTATCCCT +
Preference number: 4 (lower is better)
Translates to: LFTVPKSKTRFCPQISSRPAHAV*PGSSIP
Trigger: AGGGATACTGGAGCCAGGGCAAACGGCATGGGCTGG...TCGGGAGGATATTTGAGGACAAAAACGAGTTTTTGACTTTGGAACAGTAAATAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000342272.3
CDS-3UTR GCA 90 bp ATTCCTAAAAAGTCAAGAGAACTGCTTTCCTGCCACCAACTTGCTGTGTGCGTGAGTGCATTTACCATCTaGTCACACCATGCTGGGAAT +
Preference number: 4 (lower is better)
Translates to: IPKKSRELLSCHQLAVCVSAFTI*SHHAGN
Trigger: ATTCCCAGCATGGTGTGAGCAGATGGTAAATGCACT...CACGCACACAGCAAGTTGGTGGCAGGAAAGCAGTTCTCTTGACTTTTTAGGAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CCA 90 bp TTATTTACTGTTCCAAAGTCAAAAACTCGTTTTTGTCCTCAAATATCCTCCCGATGGGTGCAGAGGGCGTaGGTGATGCCTGCAACACTC +
Preference number: 4 (lower is better)
Translates to: LFTVPKSKTRFCPQISSRWVQRA*VMPATL
Trigger: GAGTGTTGCAGGCATCACCCACGCCCTCTGCACCCA...TCGGGAGGATATTTGAGGACAAAAACGAGTTTTTGACTTTGGAACAGTAAATAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000342272.3
CDS-3UTR CCA 90 bp TTCCTATGTGCCAGGCATGATGCTCAGTGCTTCATTGTCTTGTTTCATTGTCTCACGTCTGCAGAGATTTaGCCAATCGGGCACATGAAT +
Preference number: 4 (lower is better)
Translates to: FLCARHDAQCFIVLFHCLTSAEI*PIGHMN
Trigger: ATTCATGTGCCCGATTGGCCAAATCTCTGCAGACGT...GAGACAATGAAACAAGACAATGAAGCACTGAGCATCATGCCTGGCACATAGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342272.3
CDS-3UTR CCA 90 bp CAACCCATCCCCACTCCCCAACCATACTGCCTCTTATGGCCACCATATCCATTTGTGAGAGTAACTTCATaGGCAGTACTTATTCCTAAA +
Preference number: 4 (lower is better)
Translates to: QPIPTPQPYCLLWPPYPFVRVTS*AVLIPK
Trigger: TTTAGGAATAAGTACTGCCCATGAAGTTACTCTCAC...AAATGGATATGGTGGCCATAAGAGGCAGTATGGTTGGGGAGTGGGGATGGGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CCA 90 bp GAGAGAGTGAGGGAGTGGGAACTGGCCTCCATAGGCATAGTCAGAGTTTTGCACAGATACTGCGAAGAATaGAAAATAGCAGTGCATTTA +
Preference number: 4 (lower is better)
Translates to: ERVREWELASIGIVRVLHRYCEE*KIAVHL
Trigger: TAAATGCACTGCTATTTTCCATTCTTCGCAGTATCT...GTGCAAAACTCTGACTATGCCTATGGAGGCCAGTTCCCACTCCCTCACTCTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CCA 90 bp TCTTTAAGTGAGGTACATCCAAGTAGCCATCTTCTACCAAGTAAGCCAAAGGGGCTCACTCTTTCATGGTaGGAGCAGTGTGGTTCTGTA +
Preference number: 4 (lower is better)
Translates to: SLSEVHPSSHLLPSKPKGLTLSW*EQCGSV
Trigger: TACAGAACCACACTGCTCCCACCATGAAAGAGTGAG...CCCCTTTGGCTTACTTGGTAGAAGATGGCTACTTGGATGTACCTCACTTAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CCA 90 bp CCAATCAGTGATGGCATCTTCCACATACAGCAAAGAAGTGATATAGCCAGGATTGCCTCACAATCATGGTaGAAGACAAGGAGGAGCAAG +
Preference number: 4 (lower is better)
Translates to: PISDGIFHIQQRSDIARIASQSW*KTRRSK
Trigger: CTTGCTCCTCCTTGTCTTCCACCATGATTGTGAGGC...AATCCTGGCTATATCACTTCTTTGCTGTATGTGGAAGATGCCATCACTGATTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR CAA 72 bp GGGGACTCCACCTCAAAGGGCAGGCTCTTGATTCTATaGTCATCTACTCATAGAAGTTTCTGGAAGTTTGCT +
Preference number: 4 (lower is better)
Translates to: GDSTSKGRLLIL*SSTHRSFWKFA
Trigger: AGCAAACTTCCAGAAACTTCTATGAGTAGATGACAATAGAATCAAGAGCCTGCCCTTTGAGGTGGAGTCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR TCA 90 bp TTATTTACTGTTCCAAAGTCAAAAACTCGTTTTTGTCCTCAAATATCCTCCCGATCTCATCATAGCCCCTaGCAACCTCCCCGTCCTCCA +
Preference number: 4 (lower is better)
Translates to: LFTVPKSKTRFCPQISSRSHHSP*QPPRPP
Trigger: TGGAGGACGGGGAGGTTGTCAGGGGCTATGATGAGA...TCGGGAGGATATTTGAGGACAAAAACGAGTTTTTGACTTTGGAACAGTAAATAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000342272.3
CDS-3UTR TCA 90 bp ATTCCTAAAAAGTCAAGAGAACTGCTTTCCTGCCACCAACTTGCTGTGTGCGTGCTGGGATATTCAAACTaGCCTTGTCCATTTCCTCTA +
Preference number: 4 (lower is better)
Translates to: IPKKSRELLSCHQLAVCVLGYSN*PCPFPL
Trigger: TAGAGGAAATGGACAAGGTCAGTTTGAATATCCCAG...CACGCACACAGCAAGTTGGTGGCAGGAAAGCAGTTCTCTTGACTTTTTAGGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR TCA 90 bp TCTTTAAGTGAGGTACATCCAAGTAGCCATCTTCTACCAAGTAAGCCAAAGGGGCAAAGGGCAGGCTCTTaGTTCTATTGTCATCTACTC +
Preference number: 4 (lower is better)
Translates to: SLSEVHPSSHLLPSKPKGQRAGS*FYCHLL
Trigger: GAGTAGATGACAATAGAATCAAGAGCCTGCCCTTTG...CCCCTTTGGCTTACTTGGTAGAAGATGGCTACTTGGATGTACCTCACTTAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR GCA 90 bp ATTCCTAAAAAGTCAAGAGAACTGCTTTCCTGCCACCAACTTGCTGTGTGCGTGAAAAGTCAAGAGAACTaGTTTCCTGCCACCAACTTG +
Preference number: 4 (lower is better)
Translates to: IPKKSRELLSCHQLAVCVKSQEN*FPATNL
Trigger: CAAGTTGGTGGCAGGAAAGCAGTTCTCTTGACTTTT...CACGCACACAGCAAGTTGGTGGCAGGAAAGCAGTTCTCTTGACTTTTTAGGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CCA 90 bp ATTCCTAAAAAGTCAAGAGAACTGCTTTCCTGCCACCAACTTGCTGTGTGCGTGCAGAGCACTGTGTTCTaGGATATTCAAACTGACCTT +
Preference number: 4 (lower is better)
Translates to: IPKKSRELLSCHQLAVCVQSTVF*DIQTDL
Trigger: AAGGTCAGTTTGAATATCCCAGAACACAGTGCTCTG...CACGCACACAGCAAGTTGGTGGCAGGAAAGCAGTTCTCTTGACTTTTTAGGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CCA 90 bp GGGACAATGGGGATGGTACTACAGGCTGTACTGTCTTGTCTGTTTACCAAAACCTCTGAGTCACTTATTTaGGGGAGAGCATCTTCATAT +
Preference number: 4 (lower is better)
Translates to: GTMGMVLQAVLSCLFTKTSESLI*GRASSY
Trigger: ATATGAAGATGCTCTCCCCCAAATAAGTGACTCAGA...GGTTTTGGTAAACAGACAAGACAGTACAGCCTGTAGTACCATCCCCATTGTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR GCA 90 bp TTATTTACTGTTCCAAAGTCAAAAACTCGTTTTTGTCCTCAAATATCCTCCCGACTGCTCTGTGGATTCTaGCAGGCACAGATCTGTGCC +
Preference number: 4 (lower is better)
Translates to: LFTVPKSKTRFCPQISSRLLCGF*QAQICA
Trigger: GGCACAGATCTGTGCCTGGCAGAATCCACAGAGCAG...TCGGGAGGATATTTGAGGACAAAAACGAGTTTTTGACTTTGGAACAGTAAATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000342272.3
CDS-3UTR GCA 90 bp GGGACAATGGGGATGGTACTACAGGCTGTACTGTCTTGTCTGTTTACCAAAACCACTGTTACTTATCAATaGTGGCAAGGTAACAGATAC +
Preference number: 4 (lower is better)
Translates to: GTMGMVLQAVLSCLFTKTTVTYQ*WQGNRY
Trigger: GTATCTGTTACCTTGCCAGCATTGATAAGTAACAGT...GGTTTTGGTAAACAGACAAGACAGTACAGCCTGTAGTACCATCCCCATTGTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR GCA 90 bp CCAAGCCCATCCTTCCTGGAATCCCAGCATCATTCCAGAGTTTTGAAAACTTTTATGGCTTATAGTGAGTaGTGGCCATGCCAGAAAAAT +
Preference number: 4 (lower is better)
Translates to: PSPSFLESQHHSRVLKTFMAYSE*WPCQKN
Trigger: ATTTTTCTGGCATGGCCAGCACTCACTATAAGCCAT...AAAAGTTTTCAAAACTCTGGAATGATGCTGGGATTCCAGGAAGGATGGGCTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CCA 90 bp TTATTTACTGTTCCAAAGTCAAAAACTCGTTTTTGTCCTCAAATATCCTCCCGAACCTGGGCTGCTCTGTaGATTCTGCCAGGCACAGAT +
Preference number: 4 (lower is better)
Translates to: LFTVPKSKTRFCPQISSRTWAAL*ILPGTD
Trigger: ATCTGTGCCTGGCAGAATCCACAGAGCAGCCCAGGT...TCGGGAGGATATTTGAGGACAAAAACGAGTTTTTGACTTTGGAACAGTAAATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000342272.3
CDS-3UTR CCA 90 bp TCTTTAAGTGAGGTACATCCAAGTAGCCATCTTCTACCAAGTAAGCCAAAGGGGATGAAAATACAGTCCTaGATTCCAGCCAAGCCACAA +
Preference number: 4 (lower is better)
Translates to: SLSEVHPSSHLLPSKPKGMKIQS*IPAKPQ
Trigger: TTGTGGCTTGGCTGGAATCCAGGACTGTATTTTCAT...CCCCTTTGGCTTACTTGGTAGAAGATGGCTACTTGGATGTACCTCACTTAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR CAA 72 bp AAGAAAGTTCTAGATGTTAAGGGACAGAGCCAAGATTaGAACCAGCAACCATGTTCTGAACCACACAGCTGT +
Preference number: 4 (lower is better)
Translates to: KKVLDVKGQSQD*NQQPCSEPHSC
Trigger: ACAGCTGTGTGGTTCAGAACATGGTTGCTGGTTCAAATCTTGGCTCTGTCCCTTAACATCTAGAACTTTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CCA 90 bp TCTTTAAGTGAGGTACATCCAAGTAGCCATCTTCTACCAAGTAAGCCAAAGGGGGTTACTTATCAATGCTaGCAAGGTAACAGATACCGA +
Preference number: 4 (lower is better)
Translates to: SLSEVHPSSHLLPSKPKGVTYQC*QGNRYR
Trigger: TCGGTATCTGTTACCTTGCCAGCATTGATAAGTAAC...CCCCTTTGGCTTACTTGGTAGAAGATGGCTACTTGGATGTACCTCACTTAAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR CAA 72 bp GTTCCCTCAGACTTTGCTGACTTTACAGCCTCAAGATaGCTGACTTTACAGCCTCAAGATGTAAATAGCTTT +
Preference number: 4 (lower is better)
Translates to: VPSDFADFTASR*LTLQPQDVNSF
Trigger: AAAGCTATTTACATCTTGAGGCTGTAAAGTCAGCAATCTTGAGGCTGTAAAGTCAGCAAAGTCTGAGGGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CCA 90 bp CCAATCAGTGATGGCATCTTCCACATACAGCAAAGAAGTGATATAGCCAGGATTTCTTTCCTTTTCCTTTaGCAGATGCAGAGACCAAAA +
Preference number: 4 (lower is better)
Translates to: PISDGIFHIQQRSDIARISFLFL*QMQRPK
Trigger: TTTTGGTCTCTGCATCTGCCAAAGGAAAAGGAAAGA...AATCCTGGCTATATCACTTCTTTGCTGTATGTGGAAGATGCCATCACTGATTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372980.4
3UTR CAA 72 bp GGCAGGACTCAAGGCAGAACTAAGCGAATCAAAGTCTaGTCTTATTTACTGTTCCAAAGTCAAAAACTCGTT +
Preference number: 4 (lower is better)
Translates to: GRTQGRTKRIKV*SYLLFQSQKLV
Trigger: AACGAGTTTTTGACTTTGGAACAGTAAATAAGACAAGACTTTGATTCGCTTAGTTCTGCCTTGAGTCCTGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000342272.3
CDS-3UTR CCA 90 bp TTATTTACTGTTCCAAAGTCAAAAACTCGTTTTTGTCCTCAAATATCCTCCCGAGAATCATGTCTGGCATaGATTCCATCTACACTGGCA +
Preference number: 4 (lower is better)
Translates to: LFTVPKSKTRFCPQISSRESCLA*IPSTLA
Trigger: TGCCAGTGTAGATGGAATCCATGCCAGACATGATTC...TCGGGAGGATATTTGAGGACAAAAACGAGTTTTTGACTTTGGAACAGTAAATAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000342272.3
3UTR CAA 72 bp TGTCTTATTTACTGTTCCAAAGTCAAAAACTCGTTTTaGTCCTCAAATATCCTCCCGAAGACAGTGACAGCT +
Preference number: 4 (lower is better)
Translates to: CLIYCSKVKNSF*SSNILPKTVTA
Trigger: AGCTGTCACTGTCTTCGGGAGGATATTTGAGGACAAAAACGAGTTTTTGACTTTGGAACAGTAAATAAGACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000342272.3
3UTR CAA 72 bp CTTTCAGTGAGTTCTGTGAGTCTTTCTAGTGAATTATaGAGTATGAGGATAATCATAGGAACCCCCTTGTTT +
Preference number: 4 (lower is better)
Translates to: LSVSSVSLSSEL*SMRIIIGTPLF
Trigger: AAACAAGGGGGTTCCTATGATTATCCTCATACTCAATAATTCACTAGAAAGACTCACAGAACTCACTGAAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR GCA 90 bp TTATTTACTGTTCCAAAGTCAAAAACTCGTTTTTGTCCTCAAATATCCTCCCGAAGGCATGATGCTCAGTaGTTCATTGTCTTGTTTCAT +
Preference number: 4 (lower is better)
Translates to: LFTVPKSKTRFCPQISSRRHDAQ*FIVLFH
Trigger: ATGAAACAAGACAATGAAGCACTGAGCATCATGCCT...TCGGGAGGATATTTGAGGACAAAAACGAGTTTTTGACTTTGGAACAGTAAATAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000342272.3
CDS CCA 90 bp CCTCCGGCTCCCGCGACGGCGCAGGCGGTGCCTGCAGAGCCTCGATaGCCATGCGCTCGGTGGCTGGACGCGCGGGGCTGCGGCGGCCCG +
Preference number: 5 (lower is better)
Translates to: PPAPATAQAVPAEPR*PCARWLDARGCGGP
Trigger: CGGGCCGCCGCAGCCCCGCGCGTCCAGCCACCGAGCGCATGGCCATCGAGGCTCTGCAGGCACCGCCTGCGCCGTCGCGGGAGCCGGAGG
80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS CCA 90 bp GGGGACGAGGGCGCGGACTCGGACCCGGAGACCTCGGGCTCGGGCTaGTCCTCAAAGGGTGGGGGCTCGGGCGGCGTGGTGCGCACAGCA +
Preference number: 5 (lower is better)
Translates to: GDEGADSDPETSGSG*SSKGGGSGGVVRTA
Trigger: TGCTGTGCGCACCACGCCGCCCGAGCCCCCACCCTTTGAGGACCAGCCCGAGCCCGAGGTCTCCGGGTCCGAGTCCGCGCCCTCGTCCCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS GCA 90 bp GCCCTGGTAAAGCGCCACCTCCGGCTCCCGCGACGGCGCAGGCGGTaGCTGCAGAGCCTCGATGGCCATGCGCTCGGTGGCTGGACGCGC +
Preference number: 5 (lower is better)
Translates to: ALVKRHLRLPRRRRR*LQSLDGHALGGWTR
Trigger: GCGCGTCCAGCCACCGAGCGCATGGCCATCGAGGCTCTGCAGGCACCGCCTGCGCCGTCGCGGGAGCCGGAGGTGGCGCTTTACCAGGGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS GCA 90 bp GAAGCTGACACGGCTGCGCTGGCTACCCACGGACGTGCGCGACTCTaGGCGCCGCAGCTTGCCCAGCAGCGCGCCCCGCTGGAAGAGGCC +
Preference number: 5 (lower is better)
Translates to: EADTAALATHGRARL*APQLAQQRAPLEEA
Trigger: GGCCTCTTCCAGCGGGGCGCGCTGCTGGGCAAGCTGCGGCGCGCAGAGTCGCGCACGTCCGTGGGTAGCCAGCGCAGCCGTGTCAGCTTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS CCA 90 bp GGACTCGGACCCGGAGACCTCGGGCTCGGGCTGGTCCTCAAAGGGTaGGGGCTCGGGCGGCGTGGTGCGCACAGCATAGCTGTGGTAGCC +
Preference number: 5 (lower is better)
Translates to: GLGPGDLGLGLVLKG*GLGRRGAHSIAVVA
Trigger: GGCTACCACAGCTATGCTGTGCGCACCACGCCGCCCGAGCCCCCACCCTTTGAGGACCAGCCCGAGCCCGAGGTCTCCGGGTCCGAGTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS CCA 90 bp CCGCCAGTGCGGCCTCCTTCCGCGCCTTCTTCTTGGCCCCCGCCTTaGTCAGCCCTCGAGCCTCAGTCTTGCGGGCCTTGGCCCTGGGCT +
Preference number: 5 (lower is better)
Translates to: PPVRPPSAPSSWPPP*SALEPQSCGPWPWA
Trigger: AGCCCAGGGCCAAGGCCCGCAAGACTGAGGCTCGAGGGCTGACCAAGGCGGGGGCCAAGAAGAAGGCGCGGAAGGAGGCCGCACTGGCGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS GCA 90 bp CGGGCTCGGGCTGGTCCTCAAAGGGTGGGGGCTCGGGCGGCGTGGTaGGCACAGCATAGCTGTGGTAGCCCTGGTAAAGCGCCACCTCCG +
Preference number: 5 (lower is better)
Translates to: RARAGPQRVGARAAW*AQHSCGSPGKAPPP
Trigger: CGGAGGTGGCGCTTTACCAGGGCTACCACAGCTATGCTGTGCGCACCACGCCGCCCGAGCCCCCACCCTTTGAGGACCAGCCCGAGCCCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS CCA 90 bp GCGCCCGAGCTGAGGTCGCTCTTAAGGAAGCTGACACGGCTGCGCTaGCTACCCACGGACGTGCGCGACTCTGCGCGCCGCAGCTTGCCC +
Preference number: 5 (lower is better)
Translates to: APELRSLLRKLTRLR*LPTDVRDSARRSLP
Trigger: GGGCAAGCTGCGGCGCGCAGAGTCGCGCACGTCCGTGGGTAGCCAGCGCAGCCGTGTCAGCTTCCTTAAGAGCGACCTCAGCTCGGGCGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS CCA 90 bp TTGGCCTTGGCGTGGCTTGTCCTGGAGGCGGCAATCTCGGCCTTCTaGCGCGCGATAGCAGCGGCGCGCTGGGCACCCTCCACACTGTGC +
Preference number: 5 (lower is better)
Translates to: LALAWLVLEAAISAF*RAIAAARWAPSTLC
Trigger: GCACAGTGTGGAGGGTGCCCAGCGCGCCGCTGCTATCGCGCGCCAGAAGGCCGAGATTGCCGCCTCCAGGACAAGCCACGCCAAGGCCAA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS CCA 90 bp CCTCGGGCTCGGGCTGGTCCTCAAAGGGTGGGGGCTCGGGCGGCGTaGTGCGCACAGCATAGCTGTGGTAGCCCTGGTAAAGCGCCACCT +
Preference number: 5 (lower is better)
Translates to: PRARAGPQRVGARAA*CAQHSCGSPGKAPP
Trigger: AGGTGGCGCTTTACCAGGGCTACCACAGCTATGCTGTGCGCACCACGCCGCCCGAGCCCCCACCCTTTGAGGACCAGCCCGAGCCCGAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS CCA 90 bp GAGGCGGCAATCTCGGCCTTCTGGCGCGCGATAGCAGCGGCGCGCTaGGCACCCTCCACACTGTGCTCCACTTTCTGGCGGACCTTGTTG +
Preference number: 5 (lower is better)
Translates to: EAAISAFWRAIAAAR*APSTLCSTFWRTLL
Trigger: CAACAAGGTCCGCCAGAAAGTGGAGCACAGTGTGGAGGGTGCCCAGCGCGCCGCTGCTATCGCGCGCCAGAAGGCCGAGATTGCCGCCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CAA 90 bp GAAGGAGCCCAGGACATTCCATTCCTCTTGGCACCACCACCGCCACCCAGCACAGGCTTGGGCTCCAGCTaGGCGGGGGTCTCGCGTGCA +
Preference number: 5 (lower is better)
Translates to: EGAQDIPFLLAPPPPPSTGLGSS*AGVSRA
Trigger: TGCACGCGAGACCCCCGCCAAGCTGGAGCCCAAGCC...TGTGCTGGGTGGCGGTGGTGGTGCCAAGAGGAATGGAATGTCCTGGGCTCCTTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CAA 90 bp GGGACAGGAGCAGATCAGGAAGCTCAAGAGACCAGGGCGCTTCTCTCTGGGCTCGCCCTGGGCTCGGCTTaGGGGATGATGGGCTTGGGC +
Preference number: 5 (lower is better)
Translates to: GTGADQEAQETRALLSGLALGSA*GMMGLG
Trigger: GCCCAAGCCCATCATCCCCAAAGCCGAGCCCAGGGC...GAGCCCAGAGAGAAGCGCCCTGGTCTCTTGAGCTTCCTGATCTGCTCCTGTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS GCA 90 bp TTCTGGCGCGCGATAGCAGCGGCGCGCTGGGCACCCTCCACACTGTaGTCCACTTTCTGGCGGACCTTGTTGCTCTTGAGCTGCAGCATG +
Preference number: 5 (lower is better)
Translates to: FWRAIAAARWAPSTL*STFWRTLLLLSCSM
Trigger: CATGCTGCAGCTCAAGAGCAACAAGGTCCGCCAGAAAGTGGAGCACAGTGTGGAGGGTGCCCAGCGCGCCGCTGCTATCGCGCGCCAGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS GCA 90 bp AGCAATGTTGGACTCCTGGTTGGCAGCCAGGGCGGCCTGTTCCGCTaGCTCAGCTTTGGCCTTGGCGTGGCTTGTCCTGGAGGCGGCAAT +
Preference number: 5 (lower is better)
Translates to: SNVGLLVGSQGGLFR*LSFGLGVACPGGGN
Trigger: ATTGCCGCCTCCAGGACAAGCCACGCCAAGGCCAAAGCTGAGGCAGCGGAACAGGCCGCCCTGGCTGCCAACCAGGAGTCCAACATTGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS CCA 90 bp ATAGCAGCGGCGCGCTGGGCACCCTCCACACTGTGCTCCACTTTCTaGCGGACCTTGTTGCTCTTGAGCTGCAGCATGCGGCGCTTGGTG +
Preference number: 5 (lower is better)
Translates to: IAAARWAPSTLCSTF*RTLLLLSCSMRRLV
Trigger: CACCAAGCGCCGCATGCTGCAGCTCAAGAGCAACAAGGTCCGCCAGAAAGTGGAGCACAGTGTGGAGGGTGCCCAGCGCGCCGCTGCTAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CAA 90 bp AGGACAGGTCTCTGTGCTGGTCTGAGGGGGTCTCAACACCCACCCCACCCAGCTTGGCCTTGGCGTGGCTaGTCCTGGAGGCGGCAATCT +
Preference number: 5 (lower is better)
Translates to: RTGLCAGLRGSQHPPHPAWPWRG*SWRRQS
Trigger: AGATTGCCGCCTCCAGGACAAGCCACGCCAAGGCCA...AGCTGGGTGGGGTGGGTGTTGAGACCCCCTCAGACCAGCACAGAGACCTGTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CAA 90 bp GGGACAGGAGCAGATCAGGAAGCTCAAGAGACCAGGGCGCTTCTCTCTGGGCTCCGGACCTTGTTGCTCTaGAGCTGCAGCATGCGGCGC +
Preference number: 5 (lower is better)
Translates to: GTGADQEAQETRALLSGLRTLLL*SCSMRR
Trigger: GCGCCGCATGCTGCAGCTCAAGAGCAACAAGGTCCG...GAGCCCAGAGAGAAGCGCCCTGGTCTCTTGAGCTTCCTGATCTGCTCCTGTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CAA 90 bp GAAGGAGCCCAGGACATTCCATTCCTCTTGGCACCACCACCGCCACCCAGCACAAGTGATAGGGCTGGGTaGGGTAGGGGAGCCAGGCTC +
Preference number: 5 (lower is better)
Translates to: EGAQDIPFLLAPPPPPSTSDRAG*GRGARL
Trigger: GAGCCTGGCTCCCCTACCCAACCCAGCCCTATCACT...TGTGCTGGGTGGCGGTGGTGGTGCCAAGAGGAATGGAATGTCCTGGGCTCCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CAA 90 bp GAAGGAGCCCAGGACATTCCATTCCTCTTGGCACCACCACCGCCACCCAGCACACAGGTGCCCTCATACTaGGCACCGCTGCTTGAGCTC +
Preference number: 5 (lower is better)
Translates to: EGAQDIPFLLAPPPPPSTQVPSY*APLLEL
Trigger: GAGCTCAAGCAGCGGTGCCAAGTATGAGGGCACCTG...TGTGCTGGGTGGCGGTGGTGGTGCCAAGAGGAATGGAATGTCCTGGGCTCCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CAA 90 bp AGGACAGGTCTCTGTGCTGGTCTGAGGGGGTCTCAACACCCACCCCACCCAGCTGTTGGTGAACTGGCCTaGGTACGTCCCTCCATCAGC +
Preference number: 5 (lower is better)
Translates to: RTGLCAGLRGSQHPPHPAVGELA*VRPSIS
Trigger: GCTGATGGAGGGACGTACCAAGGCCAGTTCACCAAC...AGCTGGGTGGGGTGGGTGTTGAGACCCCCTCAGACCAGCACAGAGACCTGTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CAA 90 bp AGCCAGGCTCCTGAGGACAGGGTGTGCCTGAACTCGAGCCTACTGTTGGTTGAGGCCTCAGCTTTGGCCTaGGCGTGGCTTGTCCTGGAG +
Preference number: 5 (lower is better)
Translates to: SQAPEDRVCLNSSLLLVEASALA*AWLVLE
Trigger: CTCCAGGACAAGCCACGCCAAGGCCAAAGCTGAGGC...CTCAACCAACAGTAGGCTCGAGTTCAGGCACACCCTGTCCTCAGGAGCCTGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CAA 90 bp GAAGGAGCCCAGGACATTCCATTCCTCTTGGCACCACCACCGCCACCCAGCACAAGAGTCCAGTCCTCTTaGGCCACCCTGCCTGGCACT +
Preference number: 5 (lower is better)
Translates to: EGAQDIPFLLAPPPPPSTRVQSS*ATLPGT
Trigger: AGTGCCAGGCAGGGTGGCCAAAGAGGACTGGACTCT...TGTGCTGGGTGGCGGTGGTGGTGCCAAGAGGAATGGAATGTCCTGGGCTCCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS GCA 90 bp TCCACACTGTGCTCCACTTTCTGGCGGACCTTGTTGCTCTTGAGCTaGAGCATGCGGCGCTTGGTGTCCTTGACCAGCACGTTGTGGCGG +
Preference number: 5 (lower is better)
Translates to: STLCSTFWRTLLLLS*SMRRLVSLTSTLWR
Trigger: CCGCCACAACGTGCTGGTCAAGGACACCAAGCGCCGCATGCTGCAGCTCAAGAGCAACAAGGTCCGCCAGAAAGTGGAGCACAGTGTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS CCA 90 bp TCTGATATTCCGGACCTGGCTGGTAGAAGTCCGGAGCCAGCTCCCTaGCCAAAGTGCGAGCAATGTTGGACTCCTGGTTGGCAGCCAGGG +
Preference number: 5 (lower is better)
Translates to: SDIPDLAGRSPEPAP*PKCEQCWTPGWQPG
Trigger: CCCTGGCTGCCAACCAGGAGTCCAACATTGCTCGCACTTTGGCCAGGGAGCTGGCTCCGGACTTCTACCAGCCAGGTCCGGAATATCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CAA 90 bp GAAGGAGCCCAGGACATTCCATTCCTCTTGGCACCACCACCGCCACCCAGCACACAGATGAGGATGGTGTaGGGGACCTCTTCCACCTCC +
Preference number: 5 (lower is better)
Translates to: EGAQDIPFLLAPPPPPSTQMRMV*GTSSTS
Trigger: GGAGGTGGAAGAGGTCCCCAACACCATCCTCATCTG...TGTGCTGGGTGGCGGTGGTGGTGCCAAGAGGAATGGAATGTCCTGGGCTCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CAA 90 bp GGGTCTGCTGTGCTCTCCTGGGGTCTCCATAGAATGCCCAGAAGCTGCCAAGACCCGTCTTGCAGGCCATaGTTCCAGGTGCCCTCATAC +
Preference number: 5 (lower is better)
Translates to: GSAVLSWGLHRMPRSCQDPSCRP*FQVPSY
Trigger: GTATGAGGGCACCTGGAACAATGGCCTGCAAGACGG...GTCTTGGCAGCTTCTGGGCATTCTATGGAGACCCCAGGAGAGCACAGCAGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342272.3
CDS-3UTR CAA 90 bp CCAGCCAGAGGATCCATGGGGTCTCCCCTCGTCTATTGGTCCAGAAGGGAAGCTGGTGCCATAGCCGTCTaGCAGGCCATTGTTCCAGGT +
Preference number: 5 (lower is better)
Translates to: PARGSMGSPLVYWSRREAGAIAV*QAIVPG
Trigger: ACCTGGAACAATGGCCTGCAAGACGGCTATGGCACC...AGCTTCCCTTCTGGACCAATAGACGAGGGGAGACCCCATGGATCCTCTGGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CAA 90 bp GGGAAGCTAACTGGACTGGTGGGAGGAGACAGAGCACTGTGTTCTGGGATATTCCGGCGCTTGGTGTCCTaGACCAGCACGTTGTGGCGG +
Preference number: 5 (lower is better)
Translates to: GKLTGLVGGDRALCSGIFRRLVS*TSTLWR
Trigger: CCGCCACAACGTGCTGGTCAAGGACACCAAGCGCCG...GAATATCCCAGAACACAGTGCTCTGTCTCCTCCCACCAGTCCAGTTAGCTTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CAA 90 bp GGCCCTGATGGGGGAGGAGACAAGCCATTTCACAGGGCATCACAGGAGATTTCTATGTTGGACTCCTGGTaGGCAGCCAGGGCGGCCTGT +
Preference number: 5 (lower is better)
Translates to: GPDGGGDKPFHRASQEISMLDSW*AARAAC
Trigger: ACAGGCCGCCCTGGCTGCCAACCAGGAGTCCAACAT...AGAAATCTCCTGTGATGCCCTGTGAAATGGCTTGTCTCCTCCCCCATCAGGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CAA 90 bp GGGACAATGGGGATGGTACTACAGGCTGTACTGTCTTGTCTGTTTACCAAAACCCTCAGCAGGCCGTCCTaGGACACCCCGGGCCTGGGC +
Preference number: 5 (lower is better)
Translates to: GTMGMVLQAVLSCLFTKTLSRPS*DTPGLG
Trigger: GCCCAGGCCCGGGGTGTCCAAGGACGGCCTGCTGAG...GGTTTTGGTAAACAGACAAGACAGTACAGCCTGTAGTACCATCCCCATTGTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CAA 90 bp CTAGCATCCCAAGCACACGGGAAACCCCAAATGCAATCCCAGTCTCAGACACACCCAGGCTGTACCCAGTaGGAGCCCCAGACTTGCCCC +
Preference number: 5 (lower is better)
Translates to: LASQAHGKPQMQSQSQTHPGCTQ*EPQTCP
Trigger: GGGGCAAGTCTGGGGCTCCAACTGGGTACAGCCTGG...GTGTGTCTGAGACTGGGATTGCATTTGGGGTTTCCCGTGTGCTTGGGATGCTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CAA 90 bp GGCCCTGATGGGGGAGGAGACAAGCCATTTCACAGGGCATCACAGGAGATTTCTGGCTGTGTCCTACCCTaGAGCCAACAGGGGGTGCTG +
Preference number: 5 (lower is better)
Translates to: GPDGGGDKPFHRASQEISGCVLP*SQQGVL
Trigger: CAGCACCCCCTGTTGGCTCAAGGGTAGGACACAGCC...AGAAATCTCCTGTGATGCCCTGTGAAATGGCTTGTCTCCTCCCCCATCAGGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CAA 90 bp AGGACAGGTCTCTGTGCTGGTCTGAGGGGGTCTCAACACCCACCCCACCCAGCTAGTGACTGTATACCATaGCACTCCAGCCTGGGTGAC +
Preference number: 5 (lower is better)
Translates to: RTGLCAGLRGSQHPPHPASDCIP*HSSLGD
Trigger: GTCACCCAGGCTGGAGTGCAATGGTATACAGTCACT...AGCTGGGTGGGGTGGGTGTTGAGACCCCCTCAGACCAGCACAGAGACCTGTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CAA 90 bp CCAAGCCCATCCTTCCTGGAATCCCAGCATCATTCCAGAGTTTTGAAAACTTTTGCGGCCGCCTCGGCATaGGCCAGGAGGCTGAGCGCG +
Preference number: 5 (lower is better)
Translates to: PSPSFLESQHHSRVLKTFAAASA*ARRLSA
Trigger: CGCGCTCAGCCTCCTGGCCAATGCCGAGGCGGCCGC...AAAAGTTTTCAAAACTCTGGAATGATGCTGGGATTCCAGGAAGGATGGGCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CAA 90 bp CTAGCATCCCAAGCACACGGGAAACCCCAAATGCAATCCCAGTCTCAGACACACTGCAGCATGCGGCGCTaGGTGTCCTTGACCAGCACG +
Preference number: 5 (lower is better)
Translates to: LASQAHGKPQMQSQSQTHCSMRR*VSLTST
Trigger: CGTGCTGGTCAAGGACACCAAGCGCCGCATGCTGCA...GTGTGTCTGAGACTGGGATTGCATTTGGGGTTTCCCGTGTGCTTGGGATGCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CAA 90 bp GACCCATCAGACTTCCTAGAGCTGCCTGTGGTCAAGATTAGAAGAGGAGGCATCTTGGGGATGATGGGCTaGGGCTCCAGCTTGGCGGGG +
Preference number: 5 (lower is better)
Translates to: DPSDFLELPVVKIRRGGILGMMG*GSSLAG
Trigger: CCCCGCCAAGCTGGAGCCCAAGCCCATCATCCCCAA...GATGCCTCCTCTTCTAATCTTGACCACAGGCAGCTCTAGGAAGTCTGATGGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CAA 90 bp CTAGCATCCCAAGCACACGGGAAACCCCAAATGCAATCCCAGTCTCAGACACACCACCAGCCCCCAAACTaGGCCTGGGAGCTTTGGCAG +
Preference number: 5 (lower is better)
Translates to: LASQAHGKPQMQSQSQTHHQPPN*AWELWQ
Trigger: CTGCCAAAGCTCCCAGGCCAAGTTTGGGGGCTGGTG...GTGTGTCTGAGACTGGGATTGCATTTGGGGTTTCCCGTGTGCTTGGGATGCTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CAA 90 bp GGCCCTGATGGGGGAGGAGACAAGCCATTTCACAGGGCATCACAGGAGATTTCTGCTGTGTGCGTGACCTaGGGCAAGTCCCTCTGCTCT +
Preference number: 5 (lower is better)
Translates to: GPDGGGDKPFHRASQEISAVCVT*GKSLCS
Trigger: AGAGCAGAGGGACTTGCCCAAGGTCACGCACACAGC...AGAAATCTCCTGTGATGCCCTGTGAAATGGCTTGTCTCCTCCCCCATCAGGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CAA 90 bp AGCCAGGCTCCTGAGGACAGGGTGTGCCTGAACTCGAGCCTACTGTTGGTTGAGGGCCACCTGACTCCATaGAGTGTACCAGCAAGACAG +
Preference number: 5 (lower is better)
Translates to: SQAPEDRVCLNSSLLLVEGHLTP*SVPARQ
Trigger: CTGTCTTGCTGGTACACTCAATGGAGTCAGGTGGCC...CTCAACCAACAGTAGGCTCGAGTTCAGGCACACCCTGTCCTCAGGAGCCTGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CAA 90 bp AGGACAGGTCTCTGTGCTGGTCTGAGGGGGTCTCAACACCCACCCCACCCAGCTCTATGTCCCTTTCCCTaGGCTGGTTCTGATTCGCAT +
Preference number: 5 (lower is better)
Translates to: RTGLCAGLRGSQHPPHPALCPFP*AGSDSH
Trigger: ATGCGAATCAGAACCAGCCAAGGGAAAGGGACATAG...AGCTGGGTGGGGTGGGTGTTGAGACCCCCTCAGACCAGCACAGAGACCTGTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CAA 90 bp GTGAAAGTTACACGGGAGGGAGGTGTGCCAGCCCTAACTTCTCTCCTACTCTGTACTTGGCACCGCTGCTaGAGCTCTGCCGGATTCCGT +
Preference number: 5 (lower is better)
Translates to: VKVTREGGVPALTSLLLCTWHRC*SSAGFR
Trigger: ACGGAATCCGGCAGAGCTCAAGCAGCGGTGCCAAGT...ACAGAGTAGGAGAGAAGTTAGGGCTGGCACACCTCCCTCCCGTGTAACTTTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342272.3
CDS-3UTR CAA 90 bp GACCCATCAGACTTCCTAGAGCTGCCTGTGGTCAAGATTAGAAGAGGAGGCATCTCCGCTGCCTCAGCTTaGGCCTTGGCGTGGCTTGTC +
Preference number: 5 (lower is better)
Translates to: DPSDFLELPVVKIRRGGISAASA*ALAWLV
Trigger: GACAAGCCACGCCAAGGCCAAAGCTGAGGCAGCGGA...GATGCCTCCTCTTCTAATCTTGACCACAGGCAGCTCTAGGAAGTCTGATGGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CAA 90 bp AGGACAGGTCTCTGTGCTGGTCTGAGGGGGTCTCAACACCCACCCCACCCAGCTGAAGGTTCCCAAGCATaGAAGGGAAATGGGAAAGCT +
Preference number: 5 (lower is better)
Translates to: RTGLCAGLRGSQHPPHPAEGSQA*KGNGKA
Trigger: AGCTTTCCCATTTCCCTTCAATGCTTGGGAACCTTC...AGCTGGGTGGGGTGGGTGTTGAGACCCCCTCAGACCAGCACAGAGACCTGTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CAA 90 bp AGAGTCCTGCAGAGACCTCAAGGCAGTGGGCCAGCATTGCTTTTAAGTTCATGCCCATGGCGCATGCCGTaGGTGAACTGGCCTTGGTAC +
Preference number: 5 (lower is better)
Translates to: RVLQRPQGSGPALLLSSCPWRMP*VNWPWY
Trigger: GTACCAAGGCCAGTTCACCAACGGCATGCGCCATGG...GCATGAACTTAAAAGCAATGCTGGCCCACTGCCTTGAGGTCTCTGCAGGACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CAA 90 bp AGCCAGGCTCCTGAGGACAGGGTGTGCCTGAACTCGAGCCTACTGTTGGTTGAGGCCGGGAAATGCTTCTaGACAAGCAGCTTGTCTTCA +
Preference number: 5 (lower is better)
Translates to: SQAPEDRVCLNSSLLLVEAGKCF*TSSLSS
Trigger: TGAAGACAAGCTGCTTGTCAAGAAGCATTTCCCGGC...CTCAACCAACAGTAGGCTCGAGTTCAGGCACACCCTGTCCTCAGGAGCCTGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CAA 90 bp CTAGCATCCCAAGCACACGGGAAACCCCAAATGCAATCCCAGTCTCAGACACACATCACCTCCATCCCTTaGGGGTCCCTGGGATCCTCT +
Preference number: 5 (lower is better)
Translates to: LASQAHGKPQMQSQSQTHITSIP*GSLGSS
Trigger: AGAGGATCCCAGGGACCCCAAAGGGATGGAGGTGAT...GTGTGTCTGAGACTGGGATTGCATTTGGGGTTTCCCGTGTGCTTGGGATGCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CAA 90 bp GGGACAGGAGCAGATCAGGAAGCTCAAGAGACCAGGGCGCTTCTCTCTGGGCTCCCTCTCTGTGATACCTaGAACCAATCACTCCATCTC +
Preference number: 5 (lower is better)
Translates to: GTGADQEAQETRALLSGLPLCDT*NQSLHL
Trigger: GAGATGGAGTGATTGGTTCAAGGTATCACAGAGAGG...GAGCCCAGAGAGAAGCGCCCTGGTCTCTTGAGCTTCCTGATCTGCTCCTGTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CAA 90 bp GAGAGAGTGAGGGAGTGGGAACTGGCCTCCATAGGCATAGTCAGAGTTTTGCACGTGCCCTGGCATCTGTaGCCGTACATGAGGGTCTCA +
Preference number: 5 (lower is better)
Translates to: ERVREWELASIGIVRVLHVPWHL*PYMRVS
Trigger: TGAGACCCTCATGTACGGCAACAGATGCCAGGGCAC...GTGCAAAACTCTGACTATGCCTATGGAGGCCAGTTCCCACTCCCTCACTCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CAA 90 bp GGGAAGCTAACTGGACTGGTGGGAGGAGACAGAGCACTGTGTTCTGGGATATTCTTCTGGCGGACCTTGTaGCTCTTGAGCTGCAGCATG +
Preference number: 5 (lower is better)
Translates to: GKLTGLVGGDRALCSGIFFWRTL*LLSCSM
Trigger: CATGCTGCAGCTCAAGAGCAACAAGGTCCGCCAGAA...GAATATCCCAGAACACAGTGCTCTGTCTCCTCCCACCAGTCCAGTTAGCTTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CAA 90 bp GGGAAGCTAACTGGACTGGTGGGAGGAGACAGAGCACTGTGTTCTGGGATATTCACTTTCTGGCGGACCTaGTTGCTCTTGAGCTGCAGC +
Preference number: 5 (lower is better)
Translates to: GKLTGLVGGDRALCSGIFTFWRT*LLLSCS
Trigger: GCTGCAGCTCAAGAGCAACAAGGTCCGCCAGAAAGT...GAATATCCCAGAACACAGTGCTCTGTCTCCTCCCACCAGTCCAGTTAGCTTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CAA 90 bp CCAATCAGTGATGGCATCTTCCACATACAGCAAAGAAGTGATATAGCCAGGATTCCTCGAGCCTCAGTCTaGCGGGCCTTGGCCCTGGGC +
Preference number: 5 (lower is better)
Translates to: PISDGIFHIQQRSDIARIPRASV*RALALG
Trigger: GCCCAGGGCCAAGGCCCGCAAGACTGAGGCTCGAGG...AATCCTGGCTATATCACTTCTTTGCTGTATGTGGAAGATGCCATCACTGATTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CAA 90 bp ATTCCTAAAAAGTCAAGAGAACTGCTTTCCTGCCACCAACTTGCTGTGTGCGTGTTCTTGGCCCCCGCCTaGGTCAGCCCTCGAGCCTCA +
Preference number: 5 (lower is better)
Translates to: IPKKSRELLSCHQLAVCVFLAPA*VSPRAS
Trigger: TGAGGCTCGAGGGCTGACCAAGGCGGGGGCCAAGAA...CACGCACACAGCAAGTTGGTGGCAGGAAAGCAGTTCTCTTGACTTTTTAGGAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CAA 90 bp GGGACAATGGGGATGGTACTACAGGCTGTACTGTCTTGTCTGTTTACCAAAACCTCCCTCTGGCTCAGCTaGGATGCCACGTCCTTCCCC +
Preference number: 5 (lower is better)
Translates to: GTMGMVLQAVLSCLFTKTSLWLS*DATSFP
Trigger: GGGGAAGGACGTGGCATCCAAGCTGAGCCAGAGGGA...GGTTTTGGTAAACAGACAAGACAGTACAGCCTGTAGTACCATCCCCATTGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CAA 90 bp GGCCCTGATGGGGGAGGAGACAAGCCATTTCACAGGGCATCACAGGAGATTTCTTGGAGATCCCCAAACTaGTATCTGGGGTCTGAAGGG +
Preference number: 5 (lower is better)
Translates to: GPDGGGDKPFHRASQEISWRSPN*YLGSEG
Trigger: CCCTTCAGACCCCAGATACAAGTTTGGGGATCTCCA...AGAAATCTCCTGTGATGCCCTGTGAAATGGCTTGTCTCCTCCCCCATCAGGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CAA 90 bp CCTCCAGGCACAAGGTGCTCATTCCTGGCCTGGAGCAGGGGTCACTCTGGAGTTATGCTCAGTGCTTCATaGTCTTGTTTCATTGTCTCG +
Preference number: 5 (lower is better)
Translates to: PPGTRCSFLAWSRGHSGVMLSAS*SCFIVS
Trigger: CGAGACAATGAAACAAGACAATGAAGCACTGAGCAT...AACTCCAGAGTGACCCCTGCTCCAGGCCAGGAATGAGCACCTTGTGCCTGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342272.3
CDS-3UTR CAA 90 bp CAACCCATCCCCACTCCCCAACCATACTGCCTCTTATGGCCACCATATCCATTTAGGAAGCCGCCTCCTTaGCACACCATCCAAAGTGAG +
Preference number: 5 (lower is better)
Translates to: QPIPTPQPYCLLWPPYPFRKPPP*HTIQSE
Trigger: CTCACTTTGGATGGTGTGCAAAGGAGGCGGCTTCCT...AAATGGATATGGTGGCCATAAGAGGCAGTATGGTTGGGGAGTGGGGATGGGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CAA 90 bp CCAGCCAGAGGATCCATGGGGTCTCCCCTCGTCTATTGGTCCAGAAGGGAAGCTTTGTTCCCTCAGACTTaGCTGACTTTACAGCCTCAA +
Preference number: 5 (lower is better)
Translates to: PARGSMGSPLVYWSRREALFPQT*LTLQPQ
Trigger: TTGAGGCTGTAAAGTCAGCAAAGTCTGAGGGAACAA...AGCTTCCCTTCTGGACCAATAGACGAGGGGAGACCCCATGGATCCTCTGGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CAA 90 bp ATTCCTAAAAAGTCAAGAGAACTGCTTTCCTGCCACCAACTTGCTGTGTGCGTGACTTGGCACCGCTGCTaGAGCTCTGCCGGATTCCGT +
Preference number: 5 (lower is better)
Translates to: IPKKSRELLSCHQLAVCVTWHRC*SSAGFR
Trigger: ACGGAATCCGGCAGAGCTCAAGCAGCGGTGCCAAGT...CACGCACACAGCAAGTTGGTGGCAGGAAAGCAGTTCTCTTGACTTTTTAGGAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CAA 90 bp TCCTATGTGCCAGGCATGATGCTCAGTGCTTCATTGTCTTGTTTCATTGTCTCGCAGGTGCCCTCATACTaGGCACCGCTGCTTGAGCTC +
Preference number: 5 (lower is better)
Translates to: SYVPGMMLSASLSCFIVSQVPSY*APLLEL
Trigger: GAGCTCAAGCAGCGGTGCCAAGTATGAGGGCACCTG...CGAGACAATGAAACAAGACAATGAAGCACTGAGCATCATGCCTGGCACATAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342272.3
CDS-3UTR CAA 90 bp AGAGTCCTGCAGAGACCTCAAGGCAGTGGGCCAGCATTGCTTTTAAGTTCATGCGGCCTCCTGAAACTCTaGTGGGGTGAATGTGAACTG +
Preference number: 5 (lower is better)
Translates to: RVLQRPQGSGPALLLSSCGLLKL*WGECEL
Trigger: CAGTTCACATTCACCCCACAAGAGTTTCAGGAGGCC...GCATGAACTTAAAAGCAATGCTGGCCCACTGCCTTGAGGTCTCTGCAGGACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CAA 90 bp CCAAGCCCATCCTTCCTGGAATCCCAGCATCATTCCAGAGTTTTGAAAACTTTTGTTGGAGCCCCAGACTaGCCCCTCTCTTGCCGGGAA +
Preference number: 5 (lower is better)
Translates to: PSPSFLESQHHSRVLKTFVGAPD*PLSCRE
Trigger: TTCCCGGCAAGAGAGGGGCAAGTCTGGGGCTCCAAC...AAAAGTTTTCAAAACTCTGGAATGATGCTGGGATTCCAGGAAGGATGGGCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CAA 90 bp AGGACAGGTCTCTGTGCTGGTCTGAGGGGGTCTCAACACCCACCCCACCCAGCTAGGCTCTTGATTCTATaGTCATCTACTCATAGAAGT +
Preference number: 5 (lower is better)
Translates to: RTGLCAGLRGSQHPPHPARLLIL*SSTHRS
Trigger: ACTTCTATGAGTAGATGACAATAGAATCAAGAGCCT...AGCTGGGTGGGGTGGGTGTTGAGACCCCCTCAGACCAGCACAGAGACCTGTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CAA 90 bp AAGGGTCTGCTGTGCTCTCCTGGGGTCTCCATAGAATGCCCAGAAGCTGCCAAGGTCAAAAACTCGTTTTaGTCCTCAAATATCCTCCCG +
Preference number: 5 (lower is better)
Translates to: KGLLCSPGVSIECPEAAKVKNSF*SSNILP
Trigger: CGGGAGGATATTTGAGGACAAAAACGAGTTTTTGAC...CTTGGCAGCTTCTGGGCATTCTATGGAGACCCCAGGAGAGCACAGCAGACCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000342272.3
CDS-3UTR CAA 90 bp CCAAGCCCATCCTTCCTGGAATCCCAGCATCATTCCAGAGTTTTGAAAACTTTTTCCTTGACCAGCACGTaGTGGCGGTACTTGCCCTCC +
Preference number: 5 (lower is better)
Translates to: PSPSFLESQHHSRVLKTFSLTST*WRYLPS
Trigger: GGAGGGCAAGTACCGCCACAACGTGCTGGTCAAGGA...AAAAGTTTTCAAAACTCTGGAATGATGCTGGGATTCCAGGAAGGATGGGCTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CAA 90 bp AGCCAGGCTCCTGAGGACAGGGTGTGCCTGAACTCGAGCCTACTGTTGGTTGAGATATTCAAACTGACCTaGTCCATTTCCTCTACTGTC +
Preference number: 5 (lower is better)
Translates to: SQAPEDRVCLNSSLLLVEIFKLT*SISSTV
Trigger: GACAGTAGAGGAAATGGACAAGGTCAGTTTGAATAT...CTCAACCAACAGTAGGCTCGAGTTCAGGCACACCCTGTCCTCAGGAGCCTGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CAA 90 bp AGAGTCCTGCAGAGACCTCAAGGCAGTGGGCCAGCATTGCTTTTAAGTTCATGCAACTCGAGCCTACTGTaGGTTGAGGGACCTTCTTCT +
Preference number: 5 (lower is better)
Translates to: RVLQRPQGSGPALLLSSCNSSLL*VEGPSS
Trigger: AGAAGAAGGTCCCTCAACCAACAGTAGGCTCGAGTT...GCATGAACTTAAAAGCAATGCTGGCCCACTGCCTTGAGGTCTCTGCAGGACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CAA 90 bp AGAGTCCTGCAGAGACCTCAAGGCAGTGGGCCAGCATTGCTTTTAAGTTCATGCAGCCTCACAACTGCATaGCCTATGAGGAAGACCATG +
Preference number: 5 (lower is better)
Translates to: RVLQRPQGSGPALLLSSCSLTTA*PMRKTM
Trigger: CATGGTCTTCCTCATAGGCAATGCAGTTGTGAGGCT...GCATGAACTTAAAAGCAATGCTGGCCCACTGCCTTGAGGTCTCTGCAGGACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CAA 90 bp CCAGCCAGAGGATCCATGGGGTCTCCCCTCGTCTATTGGTCCAGAAGGGAAGCTCTGGTTGGCCATACTTaGTCATACTGTTACTTATCA +
Preference number: 5 (lower is better)
Translates to: PARGSMGSPLVYWSRREALVGHT*SYCYLS
Trigger: TGATAAGTAACAGTATGACAAAGTATGGCCAACCAG...AGCTTCCCTTCTGGACCAATAGACGAGGGGAGACCCCATGGATCCTCTGGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CAA 90 bp GGGACAATGGGGATGGTACTACAGGCTGTACTGTCTTGTCTGTTTACCAAAACCCTCTACAAGCAATCCTaGCTCTGGAGCTCCCACTGG +
Preference number: 5 (lower is better)
Translates to: GTMGMVLQAVLSCLFTKTLYKQS*LWSSHW
Trigger: CCAGTGGGAGCTCCAGAGCAAGGATTGCTTGTAGAG...GGTTTTGGTAAACAGACAAGACAGTACAGCCTGTAGTACCATCCCCATTGTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CAA 90 bp ATTCCTAAAAAGTCAAGAGAACTGCTTTCCTGCCACCAACTTGCTGTGTGCGTGAAAGTGCGAGCAATGTaGGACTCCTGGTTGGCAGCC +
Preference number: 5 (lower is better)
Translates to: IPKKSRELLSCHQLAVCVKVRAM*DSWLAA
Trigger: GGCTGCCAACCAGGAGTCCAACATTGCTCGCACTTT...CACGCACACAGCAAGTTGGTGGCAGGAAAGCAGTTCTCTTGACTTTTTAGGAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CAA 90 bp CCAAGCCCATCCTTCCTGGAATCCCAGCATCATTCCAGAGTTTTGAAAACTTTTTGCAGTGGCTTGATCTaGGCTCACTGCAACCTCCGC +
Preference number: 5 (lower is better)
Translates to: PSPSFLESQHHSRVLKTFCSGLI*AHCNLR
Trigger: GCGGAGGTTGCAGTGAGCCAAGATCAAGCCACTGCA...AAAAGTTTTCAAAACTCTGGAATGATGCTGGGATTCCAGGAAGGATGGGCTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CAA 90 bp GAGAGAGTGAGGGAGTGGGAACTGGCCTCCATAGGCATAGTCAGAGTTTTGCACCTCTTTCCTTTTCCTTaGGCAGATGCAGAGACCAAA +
Preference number: 5 (lower is better)
Translates to: ERVREWELASIGIVRVLHLFPFP*ADAETK
Trigger: TTTGGTCTCTGCATCTGCCAAAGGAAAAGGAAAGAG...GTGCAAAACTCTGACTATGCCTATGGAGGCCAGTTCCCACTCCCTCACTCTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CAA 90 bp GCAGGACTCAAGGCAGAACTAAGCGAATCAAAGTCTTGTCTTATTTACTGTTCCGGTGCCATAGCCGTCTaGCAGGCCATTGTTCCAGGT +
Preference number: 5 (lower is better)
Translates to: AGLKAELSESKSCLIYCSGAIAV*QAIVPG
Trigger: ACCTGGAACAATGGCCTGCAAGACGGCTATGGCACC...GGAACAGTAAATAAGACAAGACTTTGATTCGCTTAGTTCTGCCTTGAGTCCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342272.3
CDS-3UTR CAA 90 bp GACCCATCAGACTTCCTAGAGCTGCCTGTGGTCAAGATTAGAAGAGGAGGCATCTTCTTGACAAGCAGCTaGTCTTCAACACCTGCCTTA +
Preference number: 5 (lower is better)
Translates to: DPSDFLELPVVKIRRGGIFLTSS*SSTPAL
Trigger: TAAGGCAGGTGTTGAAGACAAGCTGCTTGTCAAGAA...GATGCCTCCTCTTCTAATCTTGACCACAGGCAGCTCTAGGAAGTCTGATGGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CAA 90 bp CTAGCATCCCAAGCACACGGGAAACCCCAAATGCAATCCCAGTCTCAGACACACTCAAAGGGCAGGCTCTaGATTCTATTGTCATCTACT +
Preference number: 5 (lower is better)
Translates to: LASQAHGKPQMQSQSQTHSKGRL*ILLSST
Trigger: AGTAGATGACAATAGAATCAAGAGCCTGCCCTTTGA...GTGTGTCTGAGACTGGGATTGCATTTGGGGTTTCCCGTGTGCTTGGGATGCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CAA 90 bp CCAATCAGTGATGGCATCTTCCACATACAGCAAAGAAGTGATATAGCCAGGATTCCTGCCACATCCCTGTaGACTAGCATCTCCCCTCAG +
Preference number: 5 (lower is better)
Translates to: PISDGIFHIQQRSDIARIPATSL*TSISPQ
Trigger: CTGAGGGGAGATGCTAGTCAACAGGGATGTGGCAGG...AATCCTGGCTATATCACTTCTTTGCTGTATGTGGAAGATGCCATCACTGATTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CAA 90 bp GGGACAATGGGGATGGTACTACAGGCTGTACTGTCTTGTCTGTTTACCAAAACCGTTAGCAACTGGGCCTaGAGGGAGAGGTCTGATTTT +
Preference number: 5 (lower is better)
Translates to: GTMGMVLQAVLSCLFTKTVSNWA*RERSDF
Trigger: AAAATCAGACCTCTCCCTCAAGGCCCAGTTGCTAAC...GGTTTTGGTAAACAGACAAGACAGTACAGCCTGTAGTACCATCCCCATTGTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CAA 90 bp GGGACAATGGGGATGGTACTACAGGCTGTACTGTCTTGTCTGTTTACCAAAACCATTTCCCAGCCTCCCTaGAAGCTAGTTGAGGCCAAA +
Preference number: 5 (lower is better)
Translates to: GTMGMVLQAVLSCLFTKTISQPP*KLVEAK
Trigger: TTTGGCCTCAACTAGCTTCAAGGGAGGCTGGGAAAT...GGTTTTGGTAAACAGACAAGACAGTACAGCCTGTAGTACCATCCCCATTGTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CAA 90 bp CAACCCATCCCCACTCCCCAACCATACTGCCTCTTATGGCCACCATATCCATTTACAGGCTGTACTGTCTaGTCTGTTTACCAAAACCCA +
Preference number: 5 (lower is better)
Translates to: QPIPTPQPYCLLWPPYPFTGCTV*SVYQNP
Trigger: TGGGTTTTGGTAAACAGACAAGACAGTACAGCCTGT...AAATGGATATGGTGGCCATAAGAGGCAGTATGGTTGGGGAGTGGGGATGGGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS GCA 90 bp AAGCAGGAAGGAAAGGTTCAAAGTCCCCACAAAGCGTCCCAAGTCTaGCTTCCAAGAAGTCCAAGGGAAAACGGTGTGATCTCTTTAAGA +
Preference number: 5 (lower is better)
Translates to: KQEGKVQSPHKASQV*LPRSPRENGVISLR
Trigger: TCTTAAAGAGATCACACCGTTTTCCCTTGGACTTCTTGGAAGGCAGACTTGGGACGCTTTGTGGGGACTTTGAACCTTTCCTTCCTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342272.3
ENST00000372980.4
CDS-3UTR CAA 90 bp TTCCTATGTGCCAGGCATGATGCTCAGTGCTTCATTGTCTTGTTTCATTGTCTCCACGTCTGCAGAGATTaGGCCAATCGGGCACATGAA +
Preference number: 5 (lower is better)
Translates to: FLCARHDAQCFIVLFHCLHVCRD*ANRAHE
Trigger: TTCATGTGCCCGATTGGCCAAATCTCTGCAGACGTG...GAGACAATGAAACAAGACAATGAAGCACTGAGCATCATGCCTGGCACATAGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342272.3
CDS-3UTR CAA 90 bp GACCCATCAGACTTCCTAGAGCTGCCTGTGGTCAAGATTAGAAGAGGAGGCATCTTTACAGCCTCAAGATaGCTGACTTTACAGCCTCAA +
Preference number: 5 (lower is better)
Translates to: DPSDFLELPVVKIRRGGIFTASR*LTLQPQ
Trigger: TTGAGGCTGTAAAGTCAGCAATCTTGAGGCTGTAAA...GATGCCTCCTCTTCTAATCTTGACCACAGGCAGCTCTAGGAAGTCTGATGGGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CAA 90 bp GGGACAATGGGGATGGTACTACAGGCTGTACTGTCTTGTCTGTTTACCAAAACCATCATAGGAACCCCCTaGTTTGTAGCCAGTCAGTAT +
Preference number: 5 (lower is better)
Translates to: GTMGMVLQAVLSCLFTKTIIGTP*FVASQY
Trigger: ATACTGACTGGCTACAAACAAGGGGGTTCCTATGAT...GGTTTTGGTAAACAGACAAGACAGTACAGCCTGTAGTACCATCCCCATTGTCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CAA 90 bp CCAAGCCCATCCTTCCTGGAATCCCAGCATCATTCCAGAGTTTTGAAAACTTTTGGAAGGGGGATGGGATaGAATATCAATGTCCTGGTT +
Preference number: 5 (lower is better)
Translates to: PSPSFLESQHHSRVLKTFGRGMG*NINVLV
Trigger: AACCAGGACATTGATATTCAATCCCATCCCCCTTCC...AAAAGTTTTCAAAACTCTGGAATGATGCTGGGATTCCAGGAAGGATGGGCTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CAA 90 bp TCTTTAAGTGAGGTACATCCAAGTAGCCATCTTCTACCAAGTAAGCCAAAGGGGGATGCGGGTTTATTATaGCACAGACTGCAGCATCCT +
Preference number: 5 (lower is better)
Translates to: SLSEVHPSSHLLPSKPKGDAGLL*HRLQHP
Trigger: AGGATGCTGCAGTCTGTGCAATAATAAACCCGCATC...CCCCTTTGGCTTACTTGGTAGAAGATGGCTACTTGGATGTACCTCACTTAAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CAA 90 bp CCAATCAGTGATGGCATCTTCCACATACAGCAAAGAAGTGATATAGCCAGGATTGGCAGTGGGCCAGCATaGCTTTTAAGTTCATGCATG +
Preference number: 5 (lower is better)
Translates to: PISDGIFHIQQRSDIARIGSGPA*LLSSCM
Trigger: CATGCATGAACTTAAAAGCAATGCTGGCCCACTGCC...AATCCTGGCTATATCACTTCTTTGCTGTATGTGGAAGATGCCATCACTGATTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CAA 90 bp CCAAGCCCATCCTTCCTGGAATCCCAGCATCATTCCAGAGTTTTGAAAACTTTTGGACAGAGCCAAGATTaGAACCAGCAACCATGTTCT +
Preference number: 5 (lower is better)
Translates to: PSPSFLESQHHSRVLKTFGQSQD*NQQPCS
Trigger: AGAACATGGTTGCTGGTTCAAATCTTGGCTCTGTCC...AAAAGTTTTCAAAACTCTGGAATGATGCTGGGATTCCAGGAAGGATGGGCTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CAA 90 bp TCTTTAAGTGAGGTACATCCAAGTAGCCATCTTCTACCAAGTAAGCCAAAGGGGGGCTCTGTCACTGACTaGCTGTGTGATCCTTACAAA +
Preference number: 5 (lower is better)
Translates to: SLSEVHPSSHLLPSKPKGGSVTD*LCDPYK
Trigger: TTTGTAAGGATCACACAGCAAGTCAGTGACAGAGCC...CCCCTTTGGCTTACTTGGTAGAAGATGGCTACTTGGATGTACCTCACTTAAAGA
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CAA 90 bp ATTCCTAAAAAGTCAAGAGAACTGCTTTCCTGCCACCAACTTGCTGTGTGCGTGTTAACAGGAGTGTCTTaGTTATTCATGGTGGGCTCC +
Preference number: 5 (lower is better)
Translates to: IPKKSRELLSCHQLAVCVLTGVS*LFMVGS
Trigger: GGAGCCCACCATGAATAACAAAGACACTCCTGTTAA...CACGCACACAGCAAGTTGGTGGCAGGAAAGCAGTTCTCTTGACTTTTTAGGAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CAA 90 bp CCAAGCCCATCCTTCCTGGAATCCCAGCATCATTCCAGAGTTTTGAAAACTTTTGGCAAAGAGAGGAACTaGTGCAGAGTAACTCCTCTT +
Preference number: 5 (lower is better)
Translates to: PSPSFLESQHHSRVLKTFGKERN*CRVTPL
Trigger: AAGAGGAGTTACTCTGCACAAGTTCCTCTCTTTGCC...AAAAGTTTTCAAAACTCTGGAATGATGCTGGGATTCCAGGAAGGATGGGCTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS-3UTR CAA 90 bp GATTCTACATTCGAAATGGAATCATGTCTGGCATGGATTCCATCTACACTGGCACATTGTCTTGTTTCATaGTCTCGACCATATTCTGAG +
Preference number: 5 (lower is better)
Translates to: DSTFEMESCLAWIPSTLAHCLVS*SRPYSE
Trigger: CTCAGAATATGGTCGAGACAATGAAACAAGACAATG...TGCCAGTGTAGATGGAATCCATGCCAGACATGATTCCATTTCGAATGTAGAATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342272.3
CDS GCA 72 bp ACGGCGCAGGCGGTGCCTGCAGAGCCTCGATGGCCATaGGCTCGGTGGCTGGACGCGCGGGGCTGCGGCGGC +
Preference number: 6 (lower is better)
Translates to: TAQAVPAEPRWP*ARWLDARGCGG
Trigger: GCCGCCGCAGCCCCGCGCGTCCAGCCACCGAGCGCATGGCCATCGAGGCTCTGCAGGCACCGCCTGCGCCGT
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS CAA 90 bp CTGCGCTGGCTACCCACGGACGTGCGCGACTCTGCGCGCCGCAGCTaGCCCAGCAGCGCGCCCCGCTGGAAGAGGCCGCCGCCCTTGGGC +
Preference number: 6 (lower is better)
Translates to: LRWLPTDVRDSARRS*PSSAPRWKRPPPLG
Trigger: GCCCAAGGGCGGCGGCCTCTTCCAGCGGGGCGCGCTGCTGGGCAAGCTGCGGCGCGCAGAGTCGCGCACGTCCGTGGGTAGCCAGCGCAG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS GCA 72 bp ACGGCTGCGCTGGCTACCCACGGACGTGCGCGACTCTaGGCGCCGCAGCTTGCCCAGCAGCGCGCCCCGCTG +
Preference number: 6 (lower is better)
Translates to: TAALATHGRARL*APQLAQQRAPL
Trigger: CAGCGGGGCGCGCTGCTGGGCAAGCTGCGGCGCGCAGAGTCGCGCACGTCCGTGGGTAGCCAGCGCAGCCGT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS CCA 72 bp GGCGCGGACTCGGACCCGGAGACCTCGGGCTCGGGCTaGTCCTCAAAGGGTGGGGGCTCGGGCGGCGTGGTG +
Preference number: 6 (lower is better)
Translates to: GADSDPETSGSG*SSKGGGSGGVV
Trigger: CACCACGCCGCCCGAGCCCCCACCCTTTGAGGACCAGCCCGAGCCCGAGGTCTCCGGGTCCGAGTCCGCGCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS GCA 72 bp GCCACCTCCGGCTCCCGCGACGGCGCAGGCGGTGCCTaGAGAGCCTCGATGGCCATGCGCTCGGTGGCTGGA +
Preference number: 6 (lower is better)
Translates to: ATSGSRDGAGGA*RASMAMRSVAG
Trigger: TCCAGCCACCGAGCGCATGGCCATCGAGGCTCTGCAGGCACCGCCTGCGCCGTCGCGGGAGCCGGAGGTGGC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS GCA 72 bp AAGCGCCACCTCCGGCTCCCGCGACGGCGCAGGCGGTaGCTGCAGAGCCTCGATGGCCATGCGCTCGGTGGC +
Preference number: 6 (lower is better)
Translates to: KRHLRLPRRRRR*LQSLDGHALGG
Trigger: GCCACCGAGCGCATGGCCATCGAGGCTCTGCAGGCACCGCCTGCGCCGTCGCGGGAGCCGGAGGTGGCGCTT
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS CCA 72 bp GCTGCCCTCACCGCTGGGCTCGCCGTTCCAGGCGCCTaGGCTCAGCAGGCCGTCCTTGGACACCCCGGGCCT +
Preference number: 6 (lower is better)
Translates to: AALTAGLAVPGA*AQQAVLGHPGP
Trigger: AGGCCCGGGGTGTCCAAGGACGGCCTGCTGAGCCCAGGCGCCTGGAACGGCGAGCCCAGCGGTGAGGGCAGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS CAA 90 bp GCCGCCAGTGCGGCCTCCTTCCGCGCCTTCTTCTTGGCCCCCGCCTaGGTCAGCCCTCGAGCCTCAGTCTTGCGGGCCTTGGCCCTGGGC +
Preference number: 6 (lower is better)
Translates to: AASAASFRAFFLAPA*VSPRASVLRALALG
Trigger: GCCCAGGGCCAAGGCCCGCAAGACTGAGGCTCGAGGGCTGACCAAGGCGGGGGCCAAGAAGAAGGCGCGGAAGGAGGCCGCACTGGCGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS GCA 72 bp CCCCGGCGCCAAGTCAGCACCGGGTCGGCTAGTCAGTaGCATGCCCGGGAGCCCCGACTCCACCAGCCAGAG +
Preference number: 6 (lower is better)
Translates to: PRRQVSTGSASQ*HAREPRLHQPE
Trigger: CTCTGGCTGGTGGAGTCGGGGCTCCCGGGCATGGCACTGACTAGCCGACCCGGTGCTGACTTGGCGCCGGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342272.3
ENST00000372980.4
CDS CCA 72 bp GCGTGGCTTGTCCTGGAGGCGGCAATCTCGGCCTTCTaGCGCGCGATAGCAGCGGCGCGCTGGGCACCCTCC +
Preference number: 6 (lower is better)
Translates to: AWLVLEAAISAF*RAIAAARWAPS
Trigger: GGAGGGTGCCCAGCGCGCCGCTGCTATCGCGCGCCAGAAGGCCGAGATTGCCGCCTCCAGGACAAGCCACGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS CCA 72 bp CCCGGAGACCTCGGGCTCGGGCTGGTCCTCAAAGGGTaGGGGCTCGGGCGGCGTGGTGCGCACAGCATAGCT +
Preference number: 6 (lower is better)
Translates to: PGDLGLGLVLKG*GLGRRGAHSIA
Trigger: AGCTATGCTGTGCGCACCACGCCGCCCGAGCCCCCACCCTTTGAGGACCAGCCCGAGCCCGAGGTCTCCGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS CAA 90 bp AGCCCTCGAGCCTCAGTCTTGCGGGCCTTGGCCCTGGGCTCGGCTTaGGGGATGATGGGCTTGGGCTCCAGCTTGGCGGGGGTCTCGCGT +
Preference number: 6 (lower is better)
Translates to: SPRASVLRALALGSA*GMMGLGSSLAGVSR
Trigger: ACGCGAGACCCCCGCCAAGCTGGAGCCCAAGCCCATCATCCCCAAAGCCGAGCCCAGGGCCAAGGCCCGCAAGACTGAGGCTCGAGGGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS CCA 72 bp CGGCCTCCTTCCGCGCCTTCTTCTTGGCCCCCGCCTTaGTCAGCCCTCGAGCCTCAGTCTTGCGGGCCTTGG +
Preference number: 6 (lower is better)
Translates to: RPPSAPSSWPPP*SALEPQSCGPW
Trigger: CCAAGGCCCGCAAGACTGAGGCTCGAGGGCTGACCAAGGCGGGGGCCAAGAAGAAGGCGCGGAAGGAGGCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS CCA 72 bp CTGCCGCCAGTGCGGCCTCCTTCCGCGCCTTCTTCTTaGCCCCCGCCTTGGTCAGCCCTCGAGCCTCAGTCT +
Preference number: 6 (lower is better)
Translates to: LPPVRPPSAPSS*PPPWSALEPQS
Trigger: AGACTGAGGCTCGAGGGCTGACCAAGGCGGGGGCCAAGAAGAAGGCGCGGAAGGAGGCCGCACTGGCGGCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS CAA 72 bp GCCAGGGCGGCCTGTTCCGCTGCCTCAGCTTTGGCCTaGGCGTGGCTTGTCCTGGAGGCGGCAATCTCGGCC +
Preference number: 6 (lower is better)
Translates to: ARAACSAASALA*AWLVLEAAISA
Trigger: GGCCGAGATTGCCGCCTCCAGGACAAGCCACGCCAAGGCCAAAGCTGAGGCAGCGGAACAGGCCGCCCTGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS CAA 72 bp TTGGCCCCCGCCTTGGTCAGCCCTCGAGCCTCAGTCTaGCGGGCCTTGGCCCTGGGCTCGGCTTTGGGGATG +
Preference number: 6 (lower is better)
Translates to: LAPALVSPRASV*RALALGSALGM
Trigger: CATCCCCAAAGCCGAGCCCAGGGCCAAGGCCCGCAAGACTGAGGCTCGAGGGCTGACCAAGGCGGGGGCCAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS CAA 72 bp GCGGCCTCCTTCCGCGCCTTCTTCTTGGCCCCCGCCTaGGTCAGCCCTCGAGCCTCAGTCTTGCGGGCCTTG +
Preference number: 6 (lower is better)
Translates to: AASFRAFFLAPA*VSPRASVLRAL
Trigger: CAAGGCCCGCAAGACTGAGGCTCGAGGGCTGACCAAGGCGGGGGCCAAGAAGAAGGCGCGGAAGGAGGCCGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS CAA 72 bp TCTGCCGCCAGTGCGGCCTCCTTCCGCGCCTTCTTCTaGGCCCCCGCCTTGGTCAGCCCTCGAGCCTCAGTC +
Preference number: 6 (lower is better)
Translates to: SAASAASFRAFF*APALVSPRASV
Trigger: GACTGAGGCTCGAGGGCTGACCAAGGCGGGGGCCAAGAAGAAGGCGCGGAAGGAGGCCGCACTGGCGGCAGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS CCA 72 bp CAACCTCCCCGTCCTCCAGCGTGGGTGCAGAGGGCGTaGGTGATGCCTGCAACACTCCTCCAGTGCCCTCGG +
Preference number: 6 (lower is better)
Translates to: QPPRPPAWVQRA*VMPATLLQCPR
Trigger: CCGAGGGCACTGGAGGAGTGTTGCAGGCATCACCCACGCCCTCTGCACCCACGCTGGAGGACGGGGAGGTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342272.3
ENST00000372980.4
CDS CCA 72 bp CTGAGGTCGCTCTTAAGGAAGCTGACACGGCTGCGCTaGCTACCCACGGACGTGCGCGACTCTGCGCGCCGC +
Preference number: 6 (lower is better)
Translates to: LRSLLRKLTRLR*LPTDVRDSARR
Trigger: GCGGCGCGCAGAGTCGCGCACGTCCGTGGGTAGCCAGCGCAGCCGTGTCAGCTTCCTTAAGAGCGACCTCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS GCA 72 bp GCTGGTCCTCAAAGGGTGGGGGCTCGGGCGGCGTGGTaGGCACAGCATAGCTGTGGTAGCCCTGGTAAAGCG +
Preference number: 6 (lower is better)
Translates to: AGPQRVGARAAW*AQHSCGSPGKA
Trigger: CGCTTTACCAGGGCTACCACAGCTATGCTGTGCGCACCACGCCGCCCGAGCCCCCACCCTTTGAGGACCAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS CCA 72 bp TGGCAGCCAGGGCGGCCTGTTCCGCTGCCTCAGCTTTaGCCTTGGCGTGGCTTGTCCTGGAGGCGGCAATCT +
Preference number: 6 (lower is better)
Translates to: WQPGRPVPLPQL*PWRGLSWRRQS
Trigger: AGATTGCCGCCTCCAGGACAAGCCACGCCAAGGCCAAAGCTGAGGCAGCGGAACAGGCCGCCCTGGCTGCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS CCA 72 bp CGGGCTGGTCCTCAAAGGGTGGGGGCTCGGGCGGCGTaGTGCGCACAGCATAGCTGTGGTAGCCCTGGTAAA +
Preference number: 6 (lower is better)
Translates to: RAGPQRVGARAA*CAQHSCGSPGK
Trigger: TTTACCAGGGCTACCACAGCTATGCTGTGCGCACCACGCCGCCCGAGCCCCCACCCTTTGAGGACCAGCCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS GCA 72 bp GCGATAGCAGCGGCGCGCTGGGCACCCTCCACACTGTaGTCCACTTTCTGGCGGACCTTGTTGCTCTTGAGC +
Preference number: 6 (lower is better)
Translates to: AIAAARWAPSTL*STFWRTLLLLS
Trigger: GCTCAAGAGCAACAAGGTCCGCCAGAAAGTGGAGCACAGTGTGGAGGGTGCCCAGCGCGCCGCTGCTATCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS CCA 72 bp GCGCGCTGGGCACCCTCCACACTGTGCTCCACTTTCTaGCGGACCTTGTTGCTCTTGAGCTGCAGCATGCGG +
Preference number: 6 (lower is better)
Translates to: ARWAPSTLCSTF*RTLLLLSCSMR
Trigger: CCGCATGCTGCAGCTCAAGAGCAACAAGGTCCGCCAGAAAGTGGAGCACAGTGTGGAGGGTGCCCAGCGCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS CCA 72 bp CCCTGGCCAAAGTGCGAGCAATGTTGGACTCCTGGTTaGCAGCCAGGGCGGCCTGTTCCGCTGCCTCAGCTT +
Preference number: 6 (lower is better)
Translates to: PWPKCEQCWTPG*QPGRPVPLPQL
Trigger: AAGCTGAGGCAGCGGAACAGGCCGCCCTGGCTGCCAACCAGGAGTCCAACATTGCTCGCACTTTGGCCAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS CAA 72 bp TCCCTGGCCAAAGTGCGAGCAATGTTGGACTCCTGGTaGGCAGCCAGGGCGGCCTGTTCCGCTGCCTCAGCT +
Preference number: 6 (lower is better)
Translates to: SLAKVRAMLDSW*AARAACSAASA
Trigger: AGCTGAGGCAGCGGAACAGGCCGCCCTGGCTGCCAACCAGGAGTCCAACATTGCTCGCACTTTGGCCAGGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS CAA 90 bp GCGCGCTGGGCACCCTCCACACTGTGCTCCACTTTCTGGCGGACCTaGTTGCTCTTGAGCTGCAGCATGCGGCGCTTGGTGTCCTTGACC +
Preference number: 6 (lower is better)
Translates to: ARWAPSTLCSTFWRT*LLLSCSMRRLVSLT
Trigger: GGTCAAGGACACCAAGCGCCGCATGCTGCAGCTCAAGAGCAACAAGGTCCGCCAGAAAGTGGAGCACAGTGTGGAGGGTGCCCAGCGCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS CAA 90 bp CGCTGGGCACCCTCCACACTGTGCTCCACTTTCTGGCGGACCTTGTaGCTCTTGAGCTGCAGCATGCGGCGCTTGGTGTCCTTGACCAGC +
Preference number: 6 (lower is better)
Translates to: RWAPSTLCSTFWRTL*LLSCSMRRLVSLTS
Trigger: GCTGGTCAAGGACACCAAGCGCCGCATGCTGCAGCTCAAGAGCAACAAGGTCCGCCAGAAAGTGGAGCACAGTGTGGAGGGTGCCCAGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS CCA 72 bp CCGGACCTGGCTGGTAGAAGTCCGGAGCCAGCTCCCTaGCCAAAGTGCGAGCAATGTTGGACTCCTGGTTGG +
Preference number: 6 (lower is better)
Translates to: PDLAGRSPEPAP*PKCEQCWTPGW
Trigger: CCAACCAGGAGTCCAACATTGCTCGCACTTTGGCCAGGGAGCTGGCTCCGGACTTCTACCAGCCAGGTCCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS GCA 72 bp AGCGCCCCTTGGTCTCTATGCCCAGCCCATGCCGTTTaGCCTGGCTCCAGTATCCCTCAAAGGTGTTTCCGC +
Preference number: 6 (lower is better)
Translates to: SAPWSLCPAHAV*PGSSIPQRCFR
Trigger: GCGGAAACACCTTTGAGGGATACTGGAGCCAGGGCAAACGGCATGGGCTGGGCATAGAGACCAAGGGGCGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342272.3
ENST00000372980.4
CDS CCA 72 bp CCCTTGGTCTCTATGCCCAGCCCATGCCGTTTGCCCTaGCTCCAGTATCCCTCAAAGGTGTTTCCGCTGGGC +
Preference number: 6 (lower is better)
Translates to: PLVSMPSPCRLP*LQYPSKVFPLG
Trigger: GCCCAGCGGAAACACCTTTGAGGGATACTGGAGCCAGGGCAAACGGCATGGGCTGGGCATAGAGACCAAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342272.3
ENST00000372980.4
CDS CAA 72 bp CAGCGCCCCTTGGTCTCTATGCCCAGCCCATGCCGTTaGCCCTGGCTCCAGTATCCCTCAAAGGTGTTTCCG +
Preference number: 6 (lower is better)
Translates to: QRPLVSMPSPCR*PWLQYPSKVFP
Trigger: CGGAAACACCTTTGAGGGATACTGGAGCCAGGGCAAACGGCATGGGCTGGGCATAGAGACCAAGGGGCGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342272.3
ENST00000372980.4
CDS CAA 72 bp TTGCTCTTGAGCTGCAGCATGCGGCGCTTGGTGTCCTaGACCAGCACGTTGTGGCGGTACTTGCCCTCCTCG +
Preference number: 6 (lower is better)
Translates to: LLLSCSMRRLVS*TSTLWRYLPSS
Trigger: CGAGGAGGGCAAGTACCGCCACAACGTGCTGGTCAAGGACACCAAGCGCCGCATGCTGCAGCTCAAGAGCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS CAA 72 bp CCCTCCACACTGTGCTCCACTTTCTGGCGGACCTTGTaGCTCTTGAGCTGCAGCATGCGGCGCTTGGTGTCC +
Preference number: 6 (lower is better)
Translates to: PSTLCSTFWRTL*LLSCSMRRLVS
Trigger: GGACACCAAGCGCCGCATGCTGCAGCTCAAGAGCAACAAGGTCCGCCAGAAAGTGGAGCACAGTGTGGAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS CAA 72 bp GCACCCTCCACACTGTGCTCCACTTTCTGGCGGACCTaGTTGCTCTTGAGCTGCAGCATGCGGCGCTTGGTG +
Preference number: 6 (lower is better)
Translates to: APSTLCSTFWRT*LLLSCSMRRLV
Trigger: CACCAAGCGCCGCATGCTGCAGCTCAAGAGCAACAAGGTCCGCCAGAAAGTGGAGCACAGTGTGGAGGGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS CAA 90 bp ACTTTCTGGCGGACCTTGTTGCTCTTGAGCTGCAGCATGCGGCGCTaGGTGTCCTTGACCAGCACGTTGTGGCGGTACTTGCCCTCCTCG +
Preference number: 6 (lower is better)
Translates to: TFWRTLLLLSCSMRR*VSLTSTLWRYLPSS
Trigger: CGAGGAGGGCAAGTACCGCCACAACGTGCTGGTCAAGGACACCAAGCGCCGCATGCTGCAGCTCAAGAGCAACAAGGTCCGCCAGAAAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS CAA 90 bp GCACCCTCCACACTGTGCTCCACTTTCTGGCGGACCTTGTTGCTCTaGAGCTGCAGCATGCGGCGCTTGGTGTCCTTGACCAGCACGTTG +
Preference number: 6 (lower is better)
Translates to: APSTLCSTFWRTLLL*SCSMRRLVSLTSTL
Trigger: CAACGTGCTGGTCAAGGACACCAAGCGCCGCATGCTGCAGCTCAAGAGCAACAAGGTCCGCCAGAAAGTGGAGCACAGTGTGGAGGGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS GCA 72 bp TGCTCCACTTTCTGGCGGACCTTGTTGCTCTTGAGCTaGAGCATGCGGCGCTTGGTGTCCTTGACCAGCACG +
Preference number: 6 (lower is better)
Translates to: CSTFWRTLLLLS*SMRRLVSLTST
Trigger: CGTGCTGGTCAAGGACACCAAGCGCCGCATGCTGCAGCTCAAGAGCAACAAGGTCCGCCAGAAAGTGGAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS CAA 72 bp CGGACCTTGTTGCTCTTGAGCTGCAGCATGCGGCGCTaGGTGTCCTTGACCAGCACGTTGTGGCGGTACTTG +
Preference number: 6 (lower is better)
Translates to: RTLLLLSCSMRR*VSLTSTLWRYL
Trigger: CAAGTACCGCCACAACGTGCTGGTCAAGGACACCAAGCGCCGCATGCTGCAGCTCAAGAGCAACAAGGTCCG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS TCA 72 bp TGGCCAGGCCGATGTTCAGCAGGATCACCATGCAGATaGGGATGGTGTTGGGGACCTCTTCCACCTCCACCT +
Preference number: 6 (lower is better)
Translates to: WPGRCSAGSPCR*GWCWGPLPPPP
Trigger: AGGTGGAGGTGGAAGAGGTCCCCAACACCATCCTCATCTGCATGGTGATCCTGCTGAACATCGGCCTGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS TCA 72 bp CTTCTGGCTCTGGTAAGCGACGGTCAGGTCAGGAGGTaGACAAAGAGGATGGCCAGGCCGATGTTCAGCAGG +
Preference number: 6 (lower is better)
Translates to: LLALVSDGQVRR*TKRMARPMFSR
Trigger: CCTGCTGAACATCGGCCTGGCCATCCTCTTTGTTCACCTCCTGACCTGACCGTCGCTTACCAGAGCCAGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS CAA 72 bp ACACTGTGCTCCACTTTCTGGCGGACCTTGTTGCTCTaGAGCTGCAGCATGCGGCGCTTGGTGTCCTTGACC +
Preference number: 6 (lower is better)
Translates to: TLCSTFWRTLLL*SCSMRRLVSLT
Trigger: GGTCAAGGACACCAAGCGCCGCATGCTGCAGCTCAAGAGCAACAAGGTCCGCCAGAAAGTGGAGCACAGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372980.4
CDS GCA 72 bp GGAAAGGTTCAAAGTCCCCACAAAGCGTCCCAAGTCTaGCTTCCAAGAAGTCCAAGGGAAAACGGTGTGATC +
Preference number: 6 (lower is better)
Translates to: GKVQSPHKASQV*LPRSPRENGVI
Trigger: GATCACACCGTTTTCCCTTGGACTTCTTGGAAGGCAGACTTGGGACGCTTTGTGGGGACTTTGAACCTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342272.3
ENST00000372980.4
CDS CAA 90 bp TGGCATTTCCTATGTGCCAGGCATGATGCTCAGTGCTTCATTGTCTaGTTTCATTGTCTCGACCATATTCTGAGGGCGATTTTAACACAT +
Preference number: 6 (lower is better)
Translates to: WHFLCARHDAQCFIV*FHCLDHILRAILTH
Trigger: ATGTGTTAAAATCGCCCTCAGAATATGGTCGAGACAATGAAACAAGACAATGAAGCACTGAGCATCATGCCTGGCACATAGGAAATGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342272.3