RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for JMJD8 (Homo sapiens)

Ensembl gene IDs: ENSG00000161999

Ensembl transcript IDs: ENST00000562111.1, ENST00000562824.5, ENST00000563088.5, ENST00000564436.5, ENST00000565258.1, ENST00000565302.5, ENST00000566199.1, ENST00000567120.5, ENST00000567901.1, ENST00000568313.1, ENST00000568689.5, ENST00000569396.5, ENST00000569441.5, ENST00000570037.5, ENST00000609261.6

Found 250 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CACCTCACCAGCCCGGATGGTACACTCCAGGGGCCGTGCAGACGGTaGCAGGGCTGGGTATGTGTCCCGGAGCCAGGCCAGCGTGGTCTT +
Preference number: 1 (lower is better)
Translates to: HLTSPDGTLQGPCRR*QGWVCVPEPGQRGL
Trigger: AAGACCACGCTGGCCTGGCTCCGGGACACATACCCAGCCCTGCCACCGTCTGCACGGCCCCTGGAGTGTACCATCCGGGCTGGTGAGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565258.1
3UTR GCA 90 bp GAGTGTGTGTCGCTTGCTGCCGATGGCTGGCAGGTGCTCGTGCAGTaGCCCTTTTCAGCCTCTGACCGTGTGCCCCTGTGCCACAGAAGC +
Preference number: 1 (lower is better)
Translates to: ECVSLAADGWQVLVQ*PFSASDRVPLCHRS
Trigger: GCTTCTGTGGCACAGGGGCACACGGTCAGAGGCTGAAAAGGGGCACTGCACGAGCACCTGCCAGCCATCGGCAGCAAGCGACACACACTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609261.6
3UTR CCA 90 bp TGTGTCCCGGAGCCAGGCCAGCGTGGTCTTGTTGGGGTGGAACTCTaGCGTCTTCTCAGGTGGGTAAAGGAACCAGCGCTTACGACCGTA +
Preference number: 1 (lower is better)
Translates to: CVPEPGQRGLVGVEL*RLLRWVKEPALTTV
Trigger: TACGGTCGTAAGCGCTGGTTCCTTTACCCACCTGAGAAGACGCCAGAGTTCCACCCCAACAAGACCACGCTGGCCTGGCTCCGGGACACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565258.1
3UTR CCA 90 bp GGAAGTGTGGATGTTAGCTCTGAGATTGGGGTGTGGTCAGACATCTaGCCAGGTCCATCTCTGACCGGCTCCTGGTCAACCCCCAGGGAG +
Preference number: 1 (lower is better)
Translates to: GSVDVSSEIGVWSDI*PGPSLTGSWSTPRE
Trigger: CTCCCTGGGGGTTGACCAGGAGCCGGTCAGAGATGGACCTGGCCAGATGTCTGACCACACCCCAATCTCAGAGCTAACATCCACACTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609261.6
3UTR-3UTR GCA 90 bp GGAGATGAAGACGCTGGTGTCAAGGTTGAGCGTAGCATGCCACCAGCGGTCGGGACACTCCAGGGGCCGTaGAGACGGTGGCAGGGCTGG +
Preference number: 2 (lower is better)
Translates to: GDEDAGVKVERSMPPAVGTLQGP*RRWQGW
Trigger: CCAGCCCTGCCACCGTCTGCACGGCCCCTGGAGTGT...CCCGACCGCTGGTGGCATGCTACGCTCAACCTTGACACCAGCGTCTTCATCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565258.1
3UTR-3UTR CCA 90 bp TGGCGTGGGAGCATCCCCGCCTTGTGTTGGGTCTGTGCCCCATGGAGGAGGGAGTCCGTGAGCACGAGGTaGGACGTGCTGGTGTGTGAC +
Preference number: 2 (lower is better)
Translates to: WRGSIPALCWVCAPWRRESVSTR*DVLVCD
Trigger: GTCACACACCAGCACGTCCCACCTCGTGCTCACGGA...CTCCCTCCTCCATGGGGCACAGACCCAACACAAGGCGGGGATGCTCCCACGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609261.6
3UTR-3UTR GCA 90 bp TCTGTGTGTGTGCACGTGGCGTGGGAGCATCCCCGCCTTGTGTTGGGTCTGTGCCCGATGGCTGGCAGGTaGTCGTGCAGTGCCCCTTTT +
Preference number: 2 (lower is better)
Translates to: SVCVHVAWEHPRLVLGLCPMAGR*SCSAPF
Trigger: AAAAGGGGCACTGCACGAGCACCTGCCAGCCATCGG...GCACAGACCCAACACAAGGCGGGGATGCTCCCACGCCACGTGCACACACACAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609261.6
3UTR-3UTR CCA 90 bp ATGAAGACGCTGGTGTCAAGGTTGAGCGTAGCATGCCACCAGCGGTCGGGGAAGGGGCCGTGCAGACGGTaGCAGGGCTGGGTATGTGTC +
Preference number: 2 (lower is better)
Translates to: MKTLVSRLSVACHQRSGKGPCRR*QGWVCV
Trigger: GACACATACCCAGCCCTGCCACCGTCTGCACGGCCC...CTTCCCCGACCGCTGGTGGCATGCTACGCTCAACCTTGACACCAGCGTCTTCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565258.1
3UTR-3UTR TCA 90 bp TGGACTCTGGACTGTTTCCCCTCTCAGCATCGCTTTTGCTGGGCCGTGATCGTCGGACGTGCTGGTGTGTaGCCGGCAGTCCTGCCAGCT +
Preference number: 2 (lower is better)
Translates to: WTLDCFPSQHRFCWAVIVGRAGV*PAVLPA
Trigger: AGCTGGCAGGACTGCCGGTCACACACCAGCACGTCC...GACGATCACGGCCCAGCAAAAGCGATGCTGAGAGGGGAAACAGTCCAGAGTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562824.5
ENST00000609261.6
3UTR-3UTR GCA 90 bp CATGGAGGAGGGAGGTGGGGTGTCTCCCCCAAGCACAGCACTCAACTCTTCACACAGCCTCTGACCGTGTaGCCCTGTGCCACAGAAGCG +
Preference number: 2 (lower is better)
Translates to: HGGGRWGVSPKHSTQLFTQPLTV*PCATEA
Trigger: CGCTTCTGTGGCACAGGGGCACACGGTCAGAGGCTG...TGTGAAGAGTTGAGTGCTGTGCTTGGGGGAGACACCCCACCTCCCTCCTCCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609261.6
3UTR-3UTR CCA 90 bp ACGGTGGCAGGGCTGGGTATGTGTCCCGGAGCCAGGCCAGCGTGGTCTTGTTGGTGGCGTCTTCTCAGGTaGGTAAAGGAACCAGCGCTT +
Preference number: 2 (lower is better)
Translates to: TVAGLGMCPGARPAWSCWWRLLR*VKEPAL
Trigger: AAGCGCTGGTTCCTTTACCCACCTGAGAAGACGCCA...CCAACAAGACCACGCTGGCCTGGCTCCGGGACACATACCCAGCCCTGCCACCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565258.1
3UTR-3UTR CCA 90 bp AAGGTGGAGATGAAGACGCTGGTGTCAAGGTTGAGCGTAGCATGCCACCAGCGGCCTCACCAGCCCGGATaGTACACTCCAGGGGCCGTG +
Preference number: 2 (lower is better)
Translates to: KVEMKTLVSRLSVACHQRPHQPG*YTPGAV
Trigger: CACGGCCCCTGGAGTGTACCATCCGGGCTGGTGAGG...CCGCTGGTGGCATGCTACGCTCAACCTTGACACCAGCGTCTTCATCTCCACCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565258.1
3UTR-3UTR CCA 90 bp GTGCCCCTGTGCCACAGAAGCGAGACATCCCCGACTACCTGTGTGGCAAGATCACGAGGTGGGACGTGCTaGTGTGTGACCGGCAGTCCT +
Preference number: 2 (lower is better)
Translates to: VPLCHRSETSPTTCVARSRGGTC*CVTGSP
Trigger: AGGACTGCCGGTCACACACCAGCACGTCCCACCTCG...TGATCTTGCCACACAGGTAGTCGGGGATGTCTCGCTTCTGTGGCACAGGGGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609261.6
3UTR-3UTR GCA 90 bp TGGACTCTGGACTGTTTCCCCTCTCAGCATCGCTTTTGCTGGGCCGTGATCGTCGCACGAGGTGGGACGTaGTGGTGTGTGACCGGCAGT +
Preference number: 2 (lower is better)
Translates to: WTLDCFPSQHRFCWAVIVARGGT*WCVTGS
Trigger: ACTGCCGGTCACACACCAGCACGTCCCACCTCGTGC...GACGATCACGGCCCAGCAAAAGCGATGCTGAGAGGGGAAACAGTCCAGAGTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562824.5
ENST00000609261.6
3UTR-3UTR CCA 90 bp TGGACTCTGGACTGTTTCCCCTCTCAGCATCGCTTTTGCTGGGCCGTGATCGTCCGAGGTGGGACGTGCTaGTGTGTGACCGGCAGTCCT +
Preference number: 2 (lower is better)
Translates to: WTLDCFPSQHRFCWAVIVRGGTC*CVTGSP
Trigger: AGGACTGCCGGTCACACACCAGCACGTCCCACCTCG...GACGATCACGGCCCAGCAAAAGCGATGCTGAGAGGGGAAACAGTCCAGAGTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562824.5
ENST00000609261.6
3UTR-3UTR CCA 90 bp TCTGTGTGTGTGCACGTGGCGTGGGAGCATCCCCGCCTTGTGTTGGGTCTGTGCCATAGTTTATGTTCCTaGCCACCCCGACCGCTTCCC +
Preference number: 2 (lower is better)
Translates to: SVCVHVAWEHPRLVLGLCHSLCS*PPRPLP
Trigger: GGGAAGCGGTCGGGGTGGCCAGGAACATAAACTATG...GCACAGACCCAACACAAGGCGGGGATGCTCCCACGCCACGTGCACACACACAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609261.6
3UTR-3UTR TCA 90 bp AGGTGGGGTGTCTCCCCCAAGCACAGCACTCAACTCTTCACAGGACAAGTACATGGACGTGCTGGTGTGTaGCCGGCAGTCCTGCCAGCT +
Preference number: 2 (lower is better)
Translates to: RWGVSPKHSTQLFTGQVHGRAGV*PAVLPA
Trigger: AGCTGGCAGGACTGCCGGTCACACACCAGCACGTCC...ATGTACTTGTCCTGTGAAGAGTTGAGTGCTGTGCTTGGGGGAGACACCCCACCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609261.6
3UTR-3UTR TCA 90 bp AGGTGGGGTGTCTCCCCCAAGCACAGCACTCAACTCTTCACAGGACAAGTACATGCGTGTGGGTCATTTTaGCCCCGTGACCCGGAGCCC +
Preference number: 2 (lower is better)
Translates to: RWGVSPKHSTQLFTGQVHACGSF*PRDPEP
Trigger: GGGCTCCGGGTCACGGGGTCAAAATGACCCACACGC...ATGTACTTGTCCTGTGAAGAGTTGAGTGCTGTGCTTGGGGGAGACACCCCACCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000609261.6
3UTR-3UTR GCA 90 bp CATGGAGGAGGGAGGTGGGGTGTCTCCCCCAAGCACAGCACTCAACTCTTCACATCTCAGCATCGCTTTTaGTGGGCCGTGATCGTCCCC +
Preference number: 2 (lower is better)
Translates to: HGGGRWGVSPKHSTQLFTSQHRF*WAVIVP
Trigger: GGGGACGATCACGGCCCAGCAAAAGCGATGCTGAGA...TGTGAAGAGTTGAGTGCTGTGCTTGGGGGAGACACCCCACCTCCCTCCTCCATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000609261.6
3UTR-3UTR GCA 90 bp GGAGGGAGGTGGGGTGTCTCCCCCAAGCACAGCACTCAACTCTTCACAGGACAAACTACTGAGGTTCCCTaGCCTACCTGGCGTCCTGGT +
Preference number: 2 (lower is better)
Translates to: GGRWGVSPKHSTQLFTGQTTEVP*PTWRPG
Trigger: ACCAGGACGCCAGGTAGGGCAGGGAACCTCAGTAGT...TTGTCCTGTGAAGAGTTGAGTGCTGTGCTTGGGGGAGACACCCCACCTCCCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609261.6
3UTR-3UTR CCA 90 bp ATGAAGACGCTGGTGTCAAGGTTGAGCGTAGCATGCCACCAGCGGTCGGGGAAGCCAGCGTGGTCTTGTTaGGGTGGAACTCTGGCGTCT +
Preference number: 2 (lower is better)
Translates to: MKTLVSRLSVACHQRSGKPAWSC*GGTLAS
Trigger: AGACGCCAGAGTTCCACCCCAACAAGACCACGCTGG...CTTCCCCGACCGCTGGTGGCATGCTACGCTCAACCTTGACACCAGCGTCTTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565258.1
3UTR-3UTR GCA 90 bp AGGTGGGGTGTCTCCCCCAAGCACAGCACTCAACTCTTCACAGGACAAGTACATGTGTGTGTCGCTTGCTaGCGATGGCTGGCAGGTGCT +
Preference number: 2 (lower is better)
Translates to: RWGVSPKHSTQLFTGQVHVCVAC*RWLAGA
Trigger: AGCACCTGCCAGCCATCGGCAGCAAGCGACACACAC...ATGTACTTGTCCTGTGAAGAGTTGAGTGCTGTGCTTGGGGGAGACACCCCACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609261.6
3UTR-3UTR CCA 90 bp AGGAAGGTGGAGATGAAGACGCTGGTGTCAAGGTTGAGCGTAGCATGCCACCAGGTTGGGGTGGAACTCTaGCGTCTTCTCAGGTGGGTA +
Preference number: 2 (lower is better)
Translates to: RKVEMKTLVSRLSVACHQVGVEL*RLLRWV
Trigger: TACCCACCTGAGAAGACGCCAGAGTTCCACCCCAAC...CTGGTGGCATGCTACGCTCAACCTTGACACCAGCGTCTTCATCTCCACCTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565258.1
3UTR-3UTR GCA 90 bp AGGTGGGGTGTCTCCCCCAAGCACAGCACTCAACTCTTCACAGGACAAGTACATTGCCCTTCTTGTCACTaGAGCGTGTGGGTCATTTTG +
Preference number: 2 (lower is better)
Translates to: RWGVSPKHSTQLFTGQVHCPSCH*SVWVIL
Trigger: CAAAATGACCCACACGCTGCAGTGACAAGAAGGGCA...ATGTACTTGTCCTGTGAAGAGTTGAGTGCTGTGCTTGGGGGAGACACCCCACCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000609261.6
3UTR CCA 72 bp AGCCCGGATGGTACACTCCAGGGGCCGTGCAGACGGTaGCAGGGCTGGGTATGTGTCCCGGAGCCAGGCCAG +
Preference number: 3 (lower is better)
Translates to: SPDGTLQGPCRR*QGWVCVPEPGQ
Trigger: CTGGCCTGGCTCCGGGACACATACCCAGCCCTGCCACCGTCTGCACGGCCCCTGGAGTGTACCATCCGGGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565258.1
3UTR GCA 72 bp CACCTCACCAGCCCGGATGGTACACTCCAGGGGCCGTaGAGACGGTGGCAGGGCTGGGTATGTGTCCCGGAG +
Preference number: 3 (lower is better)
Translates to: HLTSPDGTLQGP*RRWQGWVCVPE
Trigger: CTCCGGGACACATACCCAGCCCTGCCACCGTCTGCACGGCCCCTGGAGTGTACCATCCGGGCTGGTGAGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565258.1
3UTR GCA 72 bp TCGCTTGCTGCCGATGGCTGGCAGGTGCTCGTGCAGTaGCCCTTTTCAGCCTCTGACCGTGTGCCCCTGTGC +
Preference number: 3 (lower is better)
Translates to: SLAADGWQVLVQ*PFSASDRVPLC
Trigger: GCACAGGGGCACACGGTCAGAGGCTGAAAAGGGGCACTGCACGAGCACCTGCCAGCCATCGGCAGCAAGCGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609261.6
3UTR GCA 72 bp GTGTGTCGCTTGCTGCCGATGGCTGGCAGGTGCTCGTaGAGTGCCCCTTTTCAGCCTCTGACCGTGTGCCCC +
Preference number: 3 (lower is better)
Translates to: VCRLLPMAGRCS*SAPFQPLTVCP
Trigger: GGGGCACACGGTCAGAGGCTGAAAAGGGGCACTGCACGAGCACCTGCCAGCCATCGGCAGCAAGCGACACAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609261.6
3UTR CCA 72 bp GCAGGGCTGGGTATGTGTCCCGGAGCCAGGCCAGCGTaGTCTTGTTGGGGTGGAACTCTGGCGTCTTCTCAG +
Preference number: 3 (lower is better)
Translates to: AGLGMCPGARPA*SCWGGTLASSQ
Trigger: CTGAGAAGACGCCAGAGTTCCACCCCAACAAGACCACGCTGGCCTGGCTCCGGGACACATACCCAGCCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565258.1
3UTR-3UTR CAA 90 bp GAGATGAAGACGCTGGTGTCAAGGTTGAGCGTAGCATGCCACCAGCGGTCGGGGGCCAGCGTGGTCTTGTaGGGGTGGAACTCTGGCGTC +
Preference number: 3 (lower is better)
Translates to: EMKTLVSRLSVACHQRSGASVVL*GWNSGV
Trigger: GACGCCAGAGTTCCACCCCAACAAGACCACGCTGGC...CCCCGACCGCTGGTGGCATGCTACGCTCAACCTTGACACCAGCGTCTTCATCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565258.1
3UTR GCA 72 bp GTGAGTGTGTGTCGCTTGCTGCCGATGGCTGGCAGGTaGTCGTGCAGTGCCCCTTTTCAGCCTCTGACCGTG +
Preference number: 3 (lower is better)
Translates to: VSVCRLLPMAGR*SCSAPFQPLTV
Trigger: CACGGTCAGAGGCTGAAAAGGGGCACTGCACGAGCACCTGCCAGCCATCGGCAGCAAGCGACACACACTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609261.6
3UTR CCA 72 bp TCAGACATCTGGCCAGGTCCATCTCTGACCGGCTCCTaGTCAACCCCCAGGGAGCTGGAAGAGTGCCAGCGA +
Preference number: 3 (lower is better)
Translates to: SDIWPGPSLTGS*STPRELEECQR
Trigger: TCGCTGGCACTCTTCCAGCTCCCTGGGGGTTGACCAGGAGCCGGTCAGAGATGGACCTGGCCAGATGTCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000609261.6
3UTR-3UTR CAA 90 bp CATGGAGGAGGGAGGTGGGGTGTCTCCCCCAAGCACAGCACTCAACTCTTCACAGTGAGTGTGTGTCGCTaGCTGCCGATGGCTGGCAGG +
Preference number: 3 (lower is better)
Translates to: HGGGRWGVSPKHSTQLFTVSVCR*LPMAGR
Trigger: CCTGCCAGCCATCGGCAGCAAGCGACACACACTCAC...TGTGAAGAGTTGAGTGCTGTGCTTGGGGGAGACACCCCACCTCCCTCCTCCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609261.6
3UTR CCA 72 bp GAGGAAGGTGAGTGTGTGTCGCTTGCTGCCGATGGCTaGCAGGTGCTCGTGCAGTGCCCCTTTTCAGCCTCT +
Preference number: 3 (lower is better)
Translates to: EEGECVSLAADG*QVLVQCPFSAS
Trigger: AGAGGCTGAAAAGGGGCACTGCACGAGCACCTGCCAGCCATCGGCAGCAAGCGACACACACTCACCTTCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609261.6
3UTR-3UTR CAA 90 bp GGAGGGAGGTGGGGTGTCTCCCCCAAGCACAGCACTCAACTCTTCACAGGACAACTCTCAGCATCGCTTTaGCTGGGCCGTGATCGTCCC +
Preference number: 3 (lower is better)
Translates to: GGRWGVSPKHSTQLFTGQLSASL*LGRDRP
Trigger: GGGACGATCACGGCCCAGCAAAAGCGATGCTGAGAG...TTGTCCTGTGAAGAGTTGAGTGCTGTGCTTGGGGGAGACACCCCACCTCCCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609261.6
3UTR CCA 72 bp GAGCCAGGCCAGCGTGGTCTTGTTGGGGTGGAACTCTaGCGTCTTCTCAGGTGGGTAAAGGAACCAGCGCTT +
Preference number: 3 (lower is better)
Translates to: EPGQRGLVGVEL*RLLRWVKEPAL
Trigger: AAGCGCTGGTTCCTTTACCCACCTGAGAAGACGCCAGAGTTCCACCCCAACAAGACCACGCTGGCCTGGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565258.1
3UTR GCA 72 bp GAGATGAAGACGCTGGTGTCAAGGTTGAGCGTAGCATaGCACCAGCGGTCGGGGAAGTACAGCACCTCACCA +
Preference number: 3 (lower is better)
Translates to: EMKTLVSRLSVA*HQRSGKYSTSP
Trigger: TGGTGAGGTGCTGTACTTCCCCGACCGCTGGTGGCATGCTACGCTCAACCTTGACACCAGCGTCTTCATCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565258.1
CDS-3UTR GCA 90 bp CTCCAGGGGCCGTGCAGACGGTGGCAGGGCTGGGTATGTGTCCCGGAGCCAGGCGTGGGGTCCTGGGGGTaGAGCAGCTGCTCCACATAC +
Preference number: 4 (lower is better)
Translates to: LQGPCRRWQGWVCVPEPGVGSWG*SSCSTY
Trigger: GTATGTGGAGCAGCTGCTGCACCCCCAGGACCCCAC...GCCTGGCTCCGGGACACATACCCAGCCCTGCCACCGTCTGCACGGCCCCTGGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000565258.1
CDS-3UTR GCA 90 bp GTGCAGACGGTGGCAGGGCTGGGTATGTGTCCCGGAGCCAGGCCAGCGTGGTCTACACTCCAGGGGCCGTaGAGACGGTGGCAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: VQTVAGLGMCPGARPAWSTLQGP*RRWQGW
Trigger: CCAGCCCTGCCACCGTCTGCACGGCCCCTGGAGTGT...AGACCACGCTGGCCTGGCTCCGGGACACATACCCAGCCCTGCCACCGTCTGCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565258.1
CDS-3UTR CCA 90 bp CAGGGGCCGTGCAGACGGTGGCAGGGCTGGGTATGTGTCCCGGAGCCAGGCCAGTCCCAGCAGGCCAAATaGGGGTGGGGAGTAGTGCCG +
Preference number: 4 (lower is better)
Translates to: QGPCRRWQGWVCVPEPGQSQQAK*GWGVVP
Trigger: CGGCACTACTCCCCACCCCCATTTGGCCTGCTGGGA...CTGGCCTGGCTCCGGGACACATACCCAGCCCTGCCACCGTCTGCACGGCCCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000565258.1
CDS-3UTR CCA 90 bp CAGGGGCCGTGCAGACGGTGGCAGGGCTGGGTATGTGTCCCGGAGCCAGGCCAGAGACGGTGGCAGGGCTaGGTATGTGTCCCGGAGCCA +
Preference number: 4 (lower is better)
Translates to: QGPCRRWQGWVCVPEPGQRRWQG*VCVPEP
Trigger: TGGCTCCGGGACACATACCCAGCCCTGCCACCGTCT...CTGGCCTGGCTCCGGGACACATACCCAGCCCTGCCACCGTCTGCACGGCCCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565258.1
CDS-3UTR TCA 90 bp CTCCAGGGGCCGTGCAGACGGTGGCAGGGCTGGGTATGTGTCCCGGAGCCAGGCGAGAGGCCCACTCGGTaGAGTTGTTGTCCCCGAAGA +
Preference number: 4 (lower is better)
Translates to: LQGPCRRWQGWVCVPEPGERPTR*SCCPRR
Trigger: TCTTCGGGGACAACAACTTCACCGAGTGGGCCTCTC...GCCTGGCTCCGGGACACATACCCAGCCCTGCCACCGTCTGCACGGCCCCTGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565258.1
CDS-3UTR GCA 90 bp TCTGTGTGTGTGCACGTGGCGTGGGAGCATCCCCGCCTTGTGTTGGGTCTGTGCCCCGACGCTCCACCGTaGAGCGCTCCTCCTCCGCCA +
Preference number: 4 (lower is better)
Translates to: SVCVHVAWEHPRLVLGLCPDAPP*SAPPPP
Trigger: TGGCGGAGGAGGAGCGCTGCACGGTGGAGCGTCGGG...GCACAGACCCAACACAAGGCGGGGATGCTCCCACGCCACGTGCACACACACAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609261.6
CDS-3UTR CCA 90 bp CCAGGGGCCGTGCAGACGGTGGCAGGGCTGGGTATGTGTCCCGGAGCCAGGCCACCAGCGTGGTCTTGTTaGGGTGGAACTCTGGCGTCT +
Preference number: 4 (lower is better)
Translates to: PGAVQTVAGLGMCPGARPPAWSC*GGTLAS
Trigger: AGACGCCAGAGTTCCACCCCAACAAGACCACGCTGG...TGGCCTGGCTCCGGGACACATACCCAGCCCTGCCACCGTCTGCACGGCCCCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565258.1
CDS-3UTR TCA 90 bp TGGACTCTGGACTGTTTCCCCTCTCAGCATCGCTTTTGCTGGGCCGTGATCGTCGCGACGCCGGCGCCATaGGCCTGCCGCCCTCAGGCA +
Preference number: 4 (lower is better)
Translates to: WTLDCFPSQHRFCWAVIVATPAP*ACRPQA
Trigger: TGCCTGAGGGCGGCAGGCTCATGGCGCCGGCGTCGC...GACGATCACGGCCCAGCAAAAGCGATGCTGAGAGGGGAAACAGTCCAGAGTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562824.5
CDS-3UTR CCA 90 bp TGGCGTGGGAGCATCCCCGCCTTGTGTTGGGTCTGTGCCCCATGGAGGAGGGAGCGAGGTGGGACGTGCTaGTGTGTGACCGGCAGTCCT +
Preference number: 4 (lower is better)
Translates to: WRGSIPALCWVCAPWRRERGGTC*CVTGSP
Trigger: AGGACTGCCGGTCACACACCAGCACGTCCCACCTCG...CTCCCTCCTCCATGGGGCACAGACCCAACACAAGGCGGGGATGCTCCCACGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609261.6
CDS-3UTR CCA 90 bp TCTGTGTGTGTGCACGTGGCGTGGGAGCATCCCCGCCTTGTGTTGGGTCTGTGCGGGGAGCAGGGCCAGTaGCATGGTCCTGGGCCCCAT +
Preference number: 4 (lower is better)
Translates to: SVCVHVAWEHPRLVLGLCGEQGQ*HGPGPH
Trigger: ATGGGGCCCAGGACCATGCCACTGGCCCTGCTCCCC...GCACAGACCCAACACAAGGCGGGGATGCTCCCACGCCACGTGCACACACACAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000609261.6
CDS-3UTR CCA 90 bp TGGCGTGGGAGCATCCCCGCCTTGTGTTGGGTCTGTGCCCCATGGAGGAGGGAGCTTGCTGCCGATGGCTaGCAGGTGCTCGTGCAGTGC +
Preference number: 4 (lower is better)
Translates to: WRGSIPALCWVCAPWRRELAADG*QVLVQC
Trigger: GCACTGCACGAGCACCTGCCAGCCATCGGCAGCAAG...CTCCCTCCTCCATGGGGCACAGACCCAACACAAGGCGGGGATGCTCCCACGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609261.6
3UTR CAA 72 bp CTGTGTGTGTGCACGTGGCGTGGGAGCATCCCCGCCTaGTGTTGGGTCTGTGCCCCATGGAGGAGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: LCVCTWRGSIPA*CWVCAPWRREV
Trigger: CACCTCCCTCCTCCATGGGGCACAGACCCAACACAAGGCGGGGATGCTCCCACGCCACGTGCACACACACAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609261.6
CDS-3UTR GCA 90 bp GACGGTGGCAGGGCTGGGTATGTGTCCCGGAGCCAGGCCAGCGTGGTCTTGTTGAGGTTGAGCGTAGCATaGCACCAGCGGTCGGGGAAG +
Preference number: 4 (lower is better)
Translates to: DGGRAGYVSRSQASVVLLRLSVA*HQRSGK
Trigger: CTTCCCCGACCGCTGGTGGCATGCTACGCTCAACCT...CAACAAGACCACGCTGGCCTGGCTCCGGGACACATACCCAGCCCTGCCACCGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565258.1
CDS-3UTR CCA 90 bp ACGGTGGCAGGGCTGGGTATGTGTCCCGGAGCCAGGCCAGCGTGGTCTTGTTGGGGAGCCAGGCCAGCGTaGTCTTGTTGGGGTGGAACT +
Preference number: 4 (lower is better)
Translates to: TVAGLGMCPGARPAWSCWGARPA*SCWGGT
Trigger: AGTTCCACCCCAACAAGACCACGCTGGCCTGGCTCC...CCAACAAGACCACGCTGGCCTGGCTCCGGGACACATACCCAGCCCTGCCACCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565258.1
CDS-3UTR TCA 90 bp ATCTGTGTAATAAAATCCGTGAGCACGAGGTGGGACGTGCTGGTGTGTGACCGGGCGACGCCGGCGCCATaGGCCTGCCGCCCTCAGGCA +
Preference number: 4 (lower is better)
Translates to: ICVIKSVSTRWDVLVCDRATPAP*ACRPQA
Trigger: TGCCTGAGGGCGGCAGGCTCATGGCGCCGGCGTCGC...CCGGTCACACACCAGCACGTCCCACCTCGTGCTCACGGATTTTATTACACAGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562111.1
ENST00000562824.5
CDS-3UTR GCA 90 bp GTGCCCCTGTGCCACAGAAGCGAGACATCCCCGACTACCTGTGTGGCAAGATCAACACTCCAGGGGCCGTaGAGACGGTGGCAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: VPLCHRSETSPTTCVARSTLQGP*RRWQGW
Trigger: CCAGCCCTGCCACCGTCTGCACGGCCCCTGGAGTGT...TGATCTTGCCACACAGGTAGTCGGGGATGTCTCGCTTCTGTGGCACAGGGGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000609261.6
CDS-3UTR GCA 90 bp TCTGTGTGTGTGCACGTGGCGTGGGAGCATCCCCGCCTTGTGTTGGGTCTGTGCGCACGAGGTGGGACGTaGTGGTGTGTGACCGGCAGT +
Preference number: 4 (lower is better)
Translates to: SVCVHVAWEHPRLVLGLCARGGT*WCVTGS
Trigger: ACTGCCGGTCACACACCAGCACGTCCCACCTCGTGC...GCACAGACCCAACACAAGGCGGGGATGCTCCCACGCCACGTGCACACACACAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609261.6
CDS-3UTR GCA 90 bp TGGCGTGGGAGCATCCCCGCCTTGTGTTGGGTCTGTGCCCCATGGAGGAGGGAGTCTCAGCATCGCTTTTaGTGGGCCGTGATCGTCCCC +
Preference number: 4 (lower is better)
Translates to: WRGSIPALCWVCAPWRRESQHRF*WAVIVP
Trigger: GGGGACGATCACGGCCCAGCAAAAGCGATGCTGAGA...CTCCCTCCTCCATGGGGCACAGACCCAACACAAGGCGGGGATGCTCCCACGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000609261.6
CDS-3UTR GCA 90 bp TGGCGTGGGAGCATCCCCGCCTTGTGTTGGGTCTGTGCCCCATGGAGGAGGGAGCTTGTGTTGGGTCTGTaGCCCATGGAGGAGGGAGGT +
Preference number: 4 (lower is better)
Translates to: WRGSIPALCWVCAPWRRELVLGL*PMEEGG
Trigger: ACCTCCCTCCTCCATGGGGCACAGACCCAACACAAG...CTCCCTCCTCCATGGGGCACAGACCCAACACAAGGCGGGGATGCTCCCACGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609261.6
CDS-3UTR CCA 90 bp CATGGAGGAGGGAGGTGGGGTGTCTCCCCCAAGCACAGCACTCAACTCTTCACACCGGGTCCATGCCAGTaGAAGGGCACCCCCGAGCCA +
Preference number: 4 (lower is better)
Translates to: HGGGRWGVSPKHSTQLFTPGPCQ*KGTPEP
Trigger: TGGCTCGGGGGTGCCCTTCCACTGGCATGGACCCGG...TGTGAAGAGTTGAGTGCTGTGCTTGGGGGAGACACCCCACCTCCCTCCTCCATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000609261.6
CDS-3UTR CCA 90 bp TGGCGTGGGAGCATCCCCGCCTTGTGTTGGGTCTGTGCCCCATGGAGGAGGGAGCCAGCGTGGTCTTGTTaGGGTGGAACTCTGGCGTCT +
Preference number: 4 (lower is better)
Translates to: WRGSIPALCWVCAPWRREPAWSC*GGTLAS
Trigger: AGACGCCAGAGTTCCACCCCAACAAGACCACGCTGG...CTCCCTCCTCCATGGGGCACAGACCCAACACAAGGCGGGGATGCTCCCACGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609261.6
CDS-3UTR CCA 90 bp CTGACCGTGTGCCCCTGTGCCACAGAAGCGAGACATCCCCGACTACCTGTGTGGGTCGCTTGCTGCCGATaGCTGGCAGGTGCTCGTGCA +
Preference number: 4 (lower is better)
Translates to: LTVCPCATEARHPRLPVWVACCR*LAGARA
Trigger: TGCACGAGCACCTGCCAGCCATCGGCAGCAAGCGAC...CCACACAGGTAGTCGGGGATGTCTCGCTTCTGTGGCACAGGGGCACACGGTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609261.6
CDS-3UTR CCA 90 bp CTGACCGTGTGCCCCTGTGCCACAGAAGCGAGACATCCCCGACTACCTGTGTGGTGTGTGCACGTGGCGTaGGAGCATCCCCGCCTTGTG +
Preference number: 4 (lower is better)
Translates to: LTVCPCATEARHPRLPVWCVHVA*EHPRLV
Trigger: CACAAGGCGGGGATGCTCCCACGCCACGTGCACACA...CCACACAGGTAGTCGGGGATGTCTCGCTTCTGTGGCACAGGGGCACACGGTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000609261.6
CDS-3UTR TCA 90 bp GGAGGGAGGTGGGGTGTCTCCCCCAAGCACAGCACTCAACTCTTCACAGGACAAGGACGTGCTGGTGTGTaGCCGGCAGTCCTGCCAGCT +
Preference number: 4 (lower is better)
Translates to: GGRWGVSPKHSTQLFTGQGRAGV*PAVLPA
Trigger: AGCTGGCAGGACTGCCGGTCACACACCAGCACGTCC...TTGTCCTGTGAAGAGTTGAGTGCTGTGCTTGGGGGAGACACCCCACCTCCCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609261.6
CDS-3UTR TCA 90 bp CTGACCGTGTGCCCCTGTGCCACAGAAGCGAGACATCCCCGACTACCTGTGTGGTGGGTGGAGGACTACTaGGGTTCCCTGCCCTACCTG +
Preference number: 4 (lower is better)
Translates to: LTVCPCATEARHPRLPVWWVEDY*GSLPYL
Trigger: CAGGTAGGGCAGGGAACCTCAGTAGTCCTCCACCCA...CCACACAGGTAGTCGGGGATGTCTCGCTTCTGTGGCACAGGGGCACACGGTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609261.6
CDS-3UTR GCA 90 bp TCTGTGTGTGTGCACGTGGCGTGGGAGCATCCCCGCCTTGTGTTGGGTCTGTGCTTGTCCGTGAGTCCCTaGAGGATGACGGGCCTGACG +
Preference number: 4 (lower is better)
Translates to: SVCVHVAWEHPRLVLGLCLSVSP*RMTGLT
Trigger: CGTCAGGCCCGTCATCCTGCAGGGACTCACGGACAA...GCACAGACCCAACACAAGGCGGGGATGCTCCCACGCCACGTGCACACACACAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609261.6
CDS-3UTR CCA 90 bp TGGACTCTGGACTGTTTCCCCTCTCAGCATCGCTTTTGCTGGGCCGTGATCGTCCCGGGTCCATGCCAGTaGAAGGGCACCCCCGAGCCA +
Preference number: 4 (lower is better)
Translates to: WTLDCFPSQHRFCWAVIVPGPCQ*KGTPEP
Trigger: TGGCTCGGGGGTGCCCTTCCACTGGCATGGACCCGG...GACGATCACGGCCCAGCAAAAGCGATGCTGAGAGGGGAAACAGTCCAGAGTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000562824.5
ENST00000609261.6
CDS-3UTR CCA 90 bp TGGCAGGGCTGGGTATGTGTCCCGGAGCCAGGCCAGCGTGGTCTTGTTGGGGTGGTTGGGGTGGAACTCTaGCGTCTTCTCAGGTGGGTA +
Preference number: 4 (lower is better)
Translates to: WQGWVCVPEPGQRGLVGVVGVEL*RLLRWV
Trigger: TACCCACCTGAGAAGACGCCAGAGTTCCACCCCAAC...CACCCCAACAAGACCACGCTGGCCTGGCTCCGGGACACATACCCAGCCCTGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565258.1
CDS-3UTR CCA 90 bp GTGCCCCTGTGCCACAGAAGCGAGACATCCCCGACTACCTGTGTGGCAAGATCAGGGCCGTGCAGACGGTaGCAGGGCTGGGTATGTGTC +
Preference number: 4 (lower is better)
Translates to: VPLCHRSETSPTTCVARSGPCRR*QGWVCV
Trigger: GACACATACCCAGCCCTGCCACCGTCTGCACGGCCC...TGATCTTGCCACACAGGTAGTCGGGGATGTCTCGCTTCTGTGGCACAGGGGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609261.6
CDS-3UTR CCA 90 bp GTGTCAAGGTTGAGCGTAGCATGCCACCAGCGGTCGGGGAAGTACAGCACCTCACCTCACCAGCCCGGATaGTACACTCCAGGGGCCGTG +
Preference number: 4 (lower is better)
Translates to: VSRLSVACHQRSGKYSTSPHQPG*YTPGAV
Trigger: CACGGCCCCTGGAGTGTACCATCCGGGCTGGTGAGG...TGAGGTGCTGTACTTCCCCGACCGCTGGTGGCATGCTACGCTCAACCTTGACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565258.1
CDS-3UTR CCA 90 bp GGAGGGAGGTGGGGTGTCTCCCCCAAGCACAGCACTCAACTCTTCACAGGACAACCTCACCAGCCCGGATaGTACACTCCAGGGGCCGTG +
Preference number: 4 (lower is better)
Translates to: GGRWGVSPKHSTQLFTGQPHQPG*YTPGAV
Trigger: CACGGCCCCTGGAGTGTACCATCCGGGCTGGTGAGG...TTGTCCTGTGAAGAGTTGAGTGCTGTGCTTGGGGGAGACACCCCACCTCCCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000609261.6
CDS-3UTR TCA 90 bp CATGGAGGAGGGAGGTGGGGTGTCTCCCCCAAGCACAGCACTCAACTCTTCACAGCTTTTGCTGGGCCGTaGTCGTCCCCCTTTGTGGGC +
Preference number: 4 (lower is better)
Translates to: HGGGRWGVSPKHSTQLFTAFAGP*SSPFVG
Trigger: GCCCACAAAGGGGGACGATCACGGCCCAGCAAAAGC...TGTGAAGAGTTGAGTGCTGTGCTTGGGGGAGACACCCCACCTCCCTCCTCCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000609261.6
CDS-3UTR GCA 90 bp ATCTGTGTAATAAAATCCGTGAGCACGAGGTGGGACGTGCTGGTGTGTGACCGGCCCGACGCTCCACCGTaGAGCGCTCCTCCTCCGCCA +
Preference number: 4 (lower is better)
Translates to: ICVIKSVSTRWDVLVCDRPDAPP*SAPPPP
Trigger: TGGCGGAGGAGGAGCGCTGCACGGTGGAGCGTCGGG...CCGGTCACACACCAGCACGTCCCACCTCGTGCTCACGGATTTTATTACACAGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562111.1
ENST00000609261.6
CDS-3UTR GCA 90 bp GTGCCCCTGTGCCACAGAAGCGAGACATCCCCGACTACCTGTGTGGCAAGATCAGTGGGGTCCTGGGGGTaGAGCAGCTGCTCCACATAC +
Preference number: 4 (lower is better)
Translates to: VPLCHRSETSPTTCVARSVGSWG*SSCSTY
Trigger: GTATGTGGAGCAGCTGCTGCACCCCCAGGACCCCAC...TGATCTTGCCACACAGGTAGTCGGGGATGTCTCGCTTCTGTGGCACAGGGGCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000609261.6
CDS-3UTR GCA 90 bp TGGACTCTGGACTGTTTCCCCTCTCAGCATCGCTTTTGCTGGGCCGTGATCGTCGAGTACCCGGGTCCATaGCAGTGGAAGGGCACCCCC +
Preference number: 4 (lower is better)
Translates to: WTLDCFPSQHRFCWAVIVEYPGP*QWKGTP
Trigger: GGGGGTGCCCTTCCACTGGCATGGACCCGGGTACTC...GACGATCACGGCCCAGCAAAAGCGATGCTGAGAGGGGAAACAGTCCAGAGTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562824.5
ENST00000609261.6
CDS-3UTR GCA 90 bp TGGCTAGCCGAGGAAGGTGGAGATGAAGACGCTGGTGTCAAGGTTGAGCGTAGCGAGTACCCGGGTCCATaGCAGTGGAAGGGCACCCCC +
Preference number: 4 (lower is better)
Translates to: WLAEEGGDEDAGVKVERSEYPGP*QWKGTP
Trigger: GGGGGTGCCCTTCCACTGGCATGGACCCGGGTACTC...GCTACGCTCAACCTTGACACCAGCGTCTTCATCTCCACCTTCCTCGGCTAGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565258.1
CDS-3UTR GCA 90 bp TGTTGGACTCTGGACTGTTTCCCCTCTCAGCATCGCTTTTGCTGGGCCGTGATCACACTCCAGGGGCCGTaGAGACGGTGGCAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: CWTLDCFPSQHRFCWAVITLQGP*RRWQGW
Trigger: CCAGCCCTGCCACCGTCTGCACGGCCCCTGGAGTGT...GATCACGGCCCAGCAAAAGCGATGCTGAGAGGGGAAACAGTCCAGAGTCCAACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000562824.5
ENST00000609261.6
CDS-3UTR GCA 90 bp TCTGTGTGTGTGCACGTGGCGTGGGAGCATCCCCGCCTTGTGTTGGGTCTGTGCCAGGTGCTCGTGCAGTaGCCCTTTTCAGCCTCTGAC +
Preference number: 4 (lower is better)
Translates to: SVCVHVAWEHPRLVLGLCQVLVQ*PFSASD
Trigger: GTCAGAGGCTGAAAAGGGGCACTGCACGAGCACCTG...GCACAGACCCAACACAAGGCGGGGATGCTCCCACGCCACGTGCACACACACAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609261.6
CDS-3UTR CCA 90 bp AAGGTGGAGATGAAGACGCTGGTGTCAAGGTTGAGCGTAGCATGCCACCAGCGGCATTGCCCAGGGAGGTaGGGTCCTGGGGGTGCAGCA +
Preference number: 4 (lower is better)
Translates to: KVEMKTLVSRLSVACHQRHCPGR*GPGGAA
Trigger: TGCTGCACCCCCAGGACCCCACCTCCCTGGGCAATG...CCGCTGGTGGCATGCTACGCTCAACCTTGACACCAGCGTCTTCATCTCCACCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565258.1
CDS-3UTR CCA 90 bp TGGACTCTGGACTGTTTCCCCTCTCAGCATCGCTTTTGCTGGGCCGTGATCGTCCATTGCCCAGGGAGGTaGGGTCCTGGGGGTGCAGCA +
Preference number: 4 (lower is better)
Translates to: WTLDCFPSQHRFCWAVIVHCPGR*GPGGAA
Trigger: TGCTGCACCCCCAGGACCCCACCTCCCTGGGCAATG...GACGATCACGGCCCAGCAAAAGCGATGCTGAGAGGGGAAACAGTCCAGAGTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000562824.5
ENST00000609261.6
CDS-3UTR CCA 90 bp TGCCAGCTGTTTTGGCTAGCCGAGGAAGGTGGAGATGAAGACGCTGGTGTCAAGCCGGGTCCATGCCAGTaGAAGGGCACCCCCGAGCCA +
Preference number: 4 (lower is better)
Translates to: CQLFWLAEEGGDEDAGVKPGPCQ*KGTPEP
Trigger: TGGCTCGGGGGTGCCCTTCCACTGGCATGGACCCGG...CTTGACACCAGCGTCTTCATCTCCACCTTCCTCGGCTAGCCAAAACAGCTGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565258.1
CDS-3UTR CCA 90 bp TGGCAGGGCTGGGTATGTGTCCCGGAGCCAGGCCAGCGTGGTCTTGTTGGGGTGTGGCGTCTTCTCAGGTaGGTAAAGGAACCAGCGCTT +
Preference number: 4 (lower is better)
Translates to: WQGWVCVPEPGQRGLVGVWRLLR*VKEPAL
Trigger: AAGCGCTGGTTCCTTTACCCACCTGAGAAGACGCCA...CACCCCAACAAGACCACGCTGGCCTGGCTCCGGGACACATACCCAGCCCTGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565258.1
CDS-3UTR CCA 90 bp GGAGGGAGGTGGGGTGTCTCCCCCAAGCACAGCACTCAACTCTTCACAGGACAAAGACGGTGGCAGGGCTaGGTATGTGTCCCGGAGCCA +
Preference number: 4 (lower is better)
Translates to: GGRWGVSPKHSTQLFTGQRRWQG*VCVPEP
Trigger: TGGCTCCGGGACACATACCCAGCCCTGCCACCGTCT...TTGTCCTGTGAAGAGTTGAGTGCTGTGCTTGGGGGAGACACCCCACCTCCCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609261.6
CDS-3UTR CCA 90 bp TGGACTCTGGACTGTTTCCCCTCTCAGCATCGCTTTTGCTGGGCCGTGATCGTCGGGCCGTGCAGACGGTaGCAGGGCTGGGTATGTGTC +
Preference number: 4 (lower is better)
Translates to: WTLDCFPSQHRFCWAVIVGPCRR*QGWVCV
Trigger: GACACATACCCAGCCCTGCCACCGTCTGCACGGCCC...GACGATCACGGCCCAGCAAAAGCGATGCTGAGAGGGGAAACAGTCCAGAGTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562824.5
ENST00000609261.6
CDS-3UTR CCA 90 bp TGGACTCTGGACTGTTTCCCCTCTCAGCATCGCTTTTGCTGGGCCGTGATCGTCCCTCACCAGCCCGGATaGTACACTCCAGGGGCCGTG +
Preference number: 4 (lower is better)
Translates to: WTLDCFPSQHRFCWAVIVPHQPG*YTPGAV
Trigger: CACGGCCCCTGGAGTGTACCATCCGGGCTGGTGAGG...GACGATCACGGCCCAGCAAAAGCGATGCTGAGAGGGGAAACAGTCCAGAGTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000562824.5
ENST00000609261.6
3UTR CAA 72 bp CAGGTGGATGAGAAGAGGAAGGTGAGTGTGTGTCGCTaGCTGCCGATGGCTGGCAGGTGCTCGTGCAGTGCC +
Preference number: 4 (lower is better)
Translates to: QVDEKRKVSVCR*LPMAGRCSCSA
Trigger: GGCACTGCACGAGCACCTGCCAGCCATCGGCAGCAAGCGACACACACTCACCTTCCTCTTCTCATCCACCTG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609261.6
CDS-3UTR TCA 90 bp ATCTGTGTAATAAAATCCGTGAGCACGAGGTGGGACGTGCTGGTGTGTGACCGGCGAACTCCGCGTAGGTaGGGTCGGCCCGACGCTCCA +
Preference number: 4 (lower is better)
Translates to: ICVIKSVSTRWDVLVCDRRTPRR*GRPDAP
Trigger: TGGAGCGTCGGGCCGACCTCACCTACGCGGAGTTCG...CCGGTCACACACCAGCACGTCCCACCTCGTGCTCACGGATTTTATTACACAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562111.1
ENST00000609261.6
CDS-3UTR TCA 90 bp TGTTGGACTCTGGACTGTTTCCCCTCTCAGCATCGCTTTTGCTGGGCCGTGATCGGCCAGGTCCATCTCTaGCCGGCTCCTGGTCAACCC +
Preference number: 4 (lower is better)
Translates to: CWTLDCFPSQHRFCWAVIGQVHL*PAPGQP
Trigger: GGGTTGACCAGGAGCCGGTCAGAGATGGACCTGGCC...GATCACGGCCCAGCAAAAGCGATGCTGAGAGGGGAAACAGTCCAGAGTCCAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609261.6
CDS-3UTR GCA 90 bp TGGACTCTGGACTGTTTCCCCTCTCAGCATCGCTTTTGCTGGGCCGTGATCGTCGTGGGGTCCTGGGGGTaGAGCAGCTGCTCCACATAC +
Preference number: 4 (lower is better)
Translates to: WTLDCFPSQHRFCWAVIVVGSWG*SSCSTY
Trigger: GTATGTGGAGCAGCTGCTGCACCCCCAGGACCCCAC...GACGATCACGGCCCAGCAAAAGCGATGCTGAGAGGGGAAACAGTCCAGAGTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000562824.5
ENST00000609261.6
CDS-3UTR GCA 90 bp GTGCCCCTGTGCCACAGAAGCGAGACATCCCCGACTACCTGTGTGGCAAGATCAAGGTTGAGCGTAGCATaGCACCAGCGGTCGGGGAAG +
Preference number: 4 (lower is better)
Translates to: VPLCHRSETSPTTCVARSRLSVA*HQRSGK
Trigger: CTTCCCCGACCGCTGGTGGCATGCTACGCTCAACCT...TGATCTTGCCACACAGGTAGTCGGGGATGTCTCGCTTCTGTGGCACAGGGGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000609261.6
CDS-3UTR CCA 90 bp GGAGATGAAGACGCTGGTGTCAAGGTTGAGCGTAGCATGCCACCAGCGGTCGGGTCCAAAGCTGTAAGCTaGAGCGGTTCCCAGCAGGCC +
Preference number: 4 (lower is better)
Translates to: GDEDAGVKVERSMPPAVGSKAVS*SGSQQA
Trigger: GGCCTGCTGGGAACCGCTCCAGCTTACAGCTTTGGA...CCCGACCGCTGGTGGCATGCTACGCTCAACCTTGACACCAGCGTCTTCATCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565258.1
CDS-3UTR CCA 90 bp ATCTGTGTAATAAAATCCGTGAGCACGAGGTGGGACGTGCTGGTGTGTGACCGGCCGGGTCCATGCCAGTaGAAGGGCACCCCCGAGCCA +
Preference number: 4 (lower is better)
Translates to: ICVIKSVSTRWDVLVCDRPGPCQ*KGTPEP
Trigger: TGGCTCGGGGGTGCCCTTCCACTGGCATGGACCCGG...CCGGTCACACACCAGCACGTCCCACCTCGTGCTCACGGATTTTATTACACAGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000562111.1
ENST00000562824.5
ENST00000609261.6
CDS-3UTR CCA 90 bp AGACGGTGGCAGGGCTGGGTATGTGTCCCGGAGCCAGGCCAGCGTGGTCTTGTTGTGGTCTTGTTGGGGTaGAACTCTGGCGTCTTCTCA +
Preference number: 4 (lower is better)
Translates to: RRWQGWVCVPEPGQRGLVVVLLG*NSGVFS
Trigger: TGAGAAGACGCCAGAGTTCCACCCCAACAAGACCAC...AACAAGACCACGCTGGCCTGGCTCCGGGACACATACCCAGCCCTGCCACCGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565258.1
CDS-3UTR CCA 90 bp GTGCCCCTGTGCCACAGAAGCGAGACATCCCCGACTACCTGTGTGGCAAGATCAATCCCCGCCTTGTGTTaGGTCTGTGCCCCATGGAGG +
Preference number: 4 (lower is better)
Translates to: VPLCHRSETSPTTCVARSIPALC*VCAPWR
Trigger: CCTCCATGGGGCACAGACCCAACACAAGGCGGGGAT...TGATCTTGCCACACAGGTAGTCGGGGATGTCTCGCTTCTGTGGCACAGGGGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000609261.6
CDS-3UTR CCA 90 bp TGTTGGACTCTGGACTGTTTCCCCTCTCAGCATCGCTTTTGCTGGGCCGTGATCCTGTGTGTGTGCACGTaGCGTGGGAGCATCCCCGCC +
Preference number: 4 (lower is better)
Translates to: CWTLDCFPSQHRFCWAVILCVCT*RGSIPA
Trigger: GGCGGGGATGCTCCCACGCCACGTGCACACACACAG...GATCACGGCCCAGCAAAAGCGATGCTGAGAGGGGAAACAGTCCAGAGTCCAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000609261.6
3UTR CAA 72 bp CCGAGGAAGGTGGAGATGAAGACGCTGGTGTCAAGGTaGAGCGTAGCATGCCACCAGCGGTCGGGGAAGTAC +
Preference number: 4 (lower is better)
Translates to: PRKVEMKTLVSR*SVACHQRSGKY
Trigger: GTACTTCCCCGACCGCTGGTGGCATGCTACGCTCAACCTTGACACCAGCGTCTTCATCTCCACCTTCCTCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565258.1
CDS-3UTR TCA 90 bp ATCTGTGTAATAAAATCCGTGAGCACGAGGTGGGACGTGCTGGTGTGTGACCGGGGACGTGCTGGTGTGTaGCCGGCAGTCCTGCCAGCT +
Preference number: 4 (lower is better)
Translates to: ICVIKSVSTRWDVLVCDRGRAGV*PAVLPA
Trigger: AGCTGGCAGGACTGCCGGTCACACACCAGCACGTCC...CCGGTCACACACCAGCACGTCCCACCTCGTGCTCACGGATTTTATTACACAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000562111.1
ENST00000562824.5
ENST00000609261.6
CDS-3UTR TCA 90 bp TGTTGGACTCTGGACTGTTTCCCCTCTCAGCATCGCTTTTGCTGGGCCGTGATCGCTTTTGCTGGGCCGTaGTCGTCCCCCTTTGTGGGC +
Preference number: 4 (lower is better)
Translates to: CWTLDCFPSQHRFCWAVIAFAGP*SSPFVG
Trigger: GCCCACAAAGGGGGACGATCACGGCCCAGCAAAAGC...GATCACGGCCCAGCAAAAGCGATGCTGAGAGGGGAAACAGTCCAGAGTCCAACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000562824.5
ENST00000609261.6
CDS-3UTR GCA 90 bp GTGTCAAGGTTGAGCGTAGCATGCCACCAGCGGTCGGGGAAGTACAGCACCTCAAGTACAGGGTGTCATTaGCCAGGGAGGTGGGGTCCT +
Preference number: 4 (lower is better)
Translates to: VSRLSVACHQRSGKYSTSSTGCH*PGRWGP
Trigger: AGGACCCCACCTCCCTGGGCAATGACACCCTGTACT...TGAGGTGCTGTACTTCCCCGACCGCTGGTGGCATGCTACGCTCAACCTTGACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565258.1
CDS-3UTR GCA 90 bp CATGGAGGAGGGAGGTGGGGTGTCTCCCCCAAGCACAGCACTCAACTCTTCACAAGTACAGGGTGTCATTaGCCAGGGAGGTGGGGTCCT +
Preference number: 4 (lower is better)
Translates to: HGGGRWGVSPKHSTQLFTSTGCH*PGRWGP
Trigger: AGGACCCCACCTCCCTGGGCAATGACACCCTGTACT...TGTGAAGAGTTGAGTGCTGTGCTTGGGGGAGACACCCCACCTCCCTCCTCCATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000609261.6
CDS-3UTR GCA 90 bp ATCTGTGTAATAAAATCCGTGAGCACGAGGTGGGACGTGCTGGTGTGTGACCGGGAGTACCCGGGTCCATaGCAGTGGAAGGGCACCCCC +
Preference number: 4 (lower is better)
Translates to: ICVIKSVSTRWDVLVCDREYPGP*QWKGTP
Trigger: GGGGGTGCCCTTCCACTGGCATGGACCCGGGTACTC...CCGGTCACACACCAGCACGTCCCACCTCGTGCTCACGGATTTTATTACACAGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562111.1
ENST00000562824.5
ENST00000609261.6
CDS-3UTR GCA 90 bp GTGCCCCTGTGCCACAGAAGCGAGACATCCCCGACTACCTGTGTGGCAAGATCATGTGACCGGCAGTCCTaGCAGCTGTTTTGGCTAGCC +
Preference number: 4 (lower is better)
Translates to: VPLCHRSETSPTTCVARSCDRQS*QLFWLA
Trigger: GGCTAGCCAAAACAGCTGGCAGGACTGCCGGTCACA...TGATCTTGCCACACAGGTAGTCGGGGATGTCTCGCTTCTGTGGCACAGGGGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000609261.6
CDS-3UTR GCA 90 bp TGTTGGACTCTGGACTGTTTCCCCTCTCAGCATCGCTTTTGCTGGGCCGTGATCGCACGAGGTGGGACGTaGTGGTGTGTGACCGGCAGT +
Preference number: 4 (lower is better)
Translates to: CWTLDCFPSQHRFCWAVIARGGT*WCVTGS
Trigger: ACTGCCGGTCACACACCAGCACGTCCCACCTCGTGC...GATCACGGCCCAGCAAAAGCGATGCTGAGAGGGGAAACAGTCCAGAGTCCAACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562824.5
ENST00000609261.6
CDS-3UTR GCA 90 bp TGGACTCTGGACTGTTTCCCCTCTCAGCATCGCTTTTGCTGGGCCGTGATCGTCTTGTCCGTGAGTCCCTaGAGGATGACGGGCCTGACG +
Preference number: 4 (lower is better)
Translates to: WTLDCFPSQHRFCWAVIVLSVSP*RMTGLT
Trigger: CGTCAGGCCCGTCATCCTGCAGGGACTCACGGACAA...GACGATCACGGCCCAGCAAAAGCGATGCTGAGAGGGGAAACAGTCCAGAGTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562824.5
ENST00000609261.6
CDS-3UTR CCA 90 bp TGGACTCTGGACTGTTTCCCCTCTCAGCATCGCTTTTGCTGGGCCGTGATCGTCGGTAGGAGTAGGTGTTaGCGGTGCTCAGCCGGACCA +
Preference number: 4 (lower is better)
Translates to: WTLDCFPSQHRFCWAVIVGRSRC*RCSAGP
Trigger: TGGTCCGGCTGAGCACCGCCAACACCTACTCCTACC...GACGATCACGGCCCAGCAAAAGCGATGCTGAGAGGGGAAACAGTCCAGAGTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562824.5
ENST00000609261.6
CDS-3UTR CCA 90 bp ATCTGTGTAATAAAATCCGTGAGCACGAGGTGGGACGTGCTGGTGTGTGACCGGCATTGCCCAGGGAGGTaGGGTCCTGGGGGTGCAGCA +
Preference number: 4 (lower is better)
Translates to: ICVIKSVSTRWDVLVCDRHCPGR*GPGGAA
Trigger: TGCTGCACCCCCAGGACCCCACCTCCCTGGGCAATG...CCGGTCACACACCAGCACGTCCCACCTCGTGCTCACGGATTTTATTACACAGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000562111.1
ENST00000562824.5
ENST00000609261.6
CDS-3UTR CCA 90 bp TGTTGGACTCTGGACTGTTTCCCCTCTCAGCATCGCTTTTGCTGGGCCGTGATCTCCCAGCAGGCCAAATaGGGGTGGGGAGTAGTGCCG +
Preference number: 4 (lower is better)
Translates to: CWTLDCFPSQHRFCWAVISQQAK*GWGVVP
Trigger: CGGCACTACTCCCCACCCCCATTTGGCCTGCTGGGA...GATCACGGCCCAGCAAAAGCGATGCTGAGAGGGGAAACAGTCCAGAGTCCAACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000562824.5
ENST00000609261.6
CDS-3UTR CCA 90 bp TGGACTCTGGACTGTTTCCCCTCTCAGCATCGCTTTTGCTGGGCCGTGATCGTCGGAGCCAGGCCAGCGTaGTCTTGTTGGGGTGGAACT +
Preference number: 4 (lower is better)
Translates to: WTLDCFPSQHRFCWAVIVGARPA*SCWGGT
Trigger: AGTTCCACCCCAACAAGACCACGCTGGCCTGGCTCC...GACGATCACGGCCCAGCAAAAGCGATGCTGAGAGGGGAAACAGTCCAGAGTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000562824.5
ENST00000609261.6
CDS-3UTR CCA 90 bp TGTTGGACTCTGGACTGTTTCCCCTCTCAGCATCGCTTTTGCTGGGCCGTGATCAGACGGTGGCAGGGCTaGGTATGTGTCCCGGAGCCA +
Preference number: 4 (lower is better)
Translates to: CWTLDCFPSQHRFCWAVIRRWQG*VCVPEP
Trigger: TGGCTCCGGGACACATACCCAGCCCTGCCACCGTCT...GATCACGGCCCAGCAAAAGCGATGCTGAGAGGGGAAACAGTCCAGAGTCCAACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562824.5
ENST00000609261.6
CDS-3UTR CCA 90 bp ATCTGTGTAATAAAATCCGTGAGCACGAGGTGGGACGTGCTGGTGTGTGACCGGGTTCCCTGCCCTACCTaGCGTCCTGGTCCAGGGGAG +
Preference number: 4 (lower is better)
Translates to: ICVIKSVSTRWDVLVCDRVPCPT*RPGPGE
Trigger: CTCCCCTGGACCAGGACGCCAGGTAGGGCAGGGAAC...CCGGTCACACACCAGCACGTCCCACCTCGTGCTCACGGATTTTATTACACAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609261.6
CDS-3UTR GCA 90 bp ATCTGTGTAATAAAATCCGTGAGCACGAGGTGGGACGTGCTGGTGTGTGACCGGGTGGGGTCCTGGGGGTaGAGCAGCTGCTCCACATAC +
Preference number: 4 (lower is better)
Translates to: ICVIKSVSTRWDVLVCDRVGSWG*SSCSTY
Trigger: GTATGTGGAGCAGCTGCTGCACCCCCAGGACCCCAC...CCGGTCACACACCAGCACGTCCCACCTCGTGCTCACGGATTTTATTACACAGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000562111.1
ENST00000562824.5
ENST00000609261.6
CDS-3UTR GCA 90 bp TGGACTCTGGACTGTTTCCCCTCTCAGCATCGCTTTTGCTGGGCCGTGATCGTCAGTACAGGGTGTCATTaGCCAGGGAGGTGGGGTCCT +
Preference number: 4 (lower is better)
Translates to: WTLDCFPSQHRFCWAVIVSTGCH*PGRWGP
Trigger: AGGACCCCACCTCCCTGGGCAATGACACCCTGTACT...GACGATCACGGCCCAGCAAAAGCGATGCTGAGAGGGGAAACAGTCCAGAGTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000562824.5
ENST00000609261.6
CDS-3UTR GCA 90 bp TGTTGGACTCTGGACTGTTTCCCCTCTCAGCATCGCTTTTGCTGGGCCGTGATCAGGTTGAGCGTAGCATaGCACCAGCGGTCGGGGAAG +
Preference number: 4 (lower is better)
Translates to: CWTLDCFPSQHRFCWAVIRLSVA*HQRSGK
Trigger: CTTCCCCGACCGCTGGTGGCATGCTACGCTCAACCT...GATCACGGCCCAGCAAAAGCGATGCTGAGAGGGGAAACAGTCCAGAGTCCAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000562824.5
ENST00000609261.6
CDS-3UTR GCA 90 bp ATCTGTGTAATAAAATCCGTGAGCACGAGGTGGGACGTGCTGGTGTGTGACCGGGCACGAGGTGGGACGTaGTGGTGTGTGACCGGCAGT +
Preference number: 4 (lower is better)
Translates to: ICVIKSVSTRWDVLVCDRARGGT*WCVTGS
Trigger: ACTGCCGGTCACACACCAGCACGTCCCACCTCGTGC...CCGGTCACACACCAGCACGTCCCACCTCGTGCTCACGGATTTTATTACACAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562111.1
ENST00000562824.5
ENST00000609261.6
CDS-3UTR GCA 90 bp AGGTGGGGTGTCTCCCCCAAGCACAGCACTCAACTCTTCACAGGACAAGTACATCAGCCTCTGACCGTGTaGCCCTGTGCCACAGAAGCG +
Preference number: 4 (lower is better)
Translates to: RWGVSPKHSTQLFTGQVHQPLTV*PCATEA
Trigger: CGCTTCTGTGGCACAGGGGCACACGGTCAGAGGCTG...ATGTACTTGTCCTGTGAAGAGTTGAGTGCTGTGCTTGGGGGAGACACCCCACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609261.6
CDS-3UTR GCA 90 bp TGTTGGACTCTGGACTGTTTCCCCTCTCAGCATCGCTTTTGCTGGGCCGTGATCCCGATGGCTGGCAGGTaGTCGTGCAGTGCCCCTTTT +
Preference number: 4 (lower is better)
Translates to: CWTLDCFPSQHRFCWAVIPMAGR*SCSAPF
Trigger: AAAAGGGGCACTGCACGAGCACCTGCCAGCCATCGG...GATCACGGCCCAGCAAAAGCGATGCTGAGAGGGGAAACAGTCCAGAGTCCAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000609261.6
CDS-3UTR CCA 90 bp TGTTGGACTCTGGACTGTTTCCCCTCTCAGCATCGCTTTTGCTGGGCCGTGATCGGTAGGAGTAGGTGTTaGCGGTGCTCAGCCGGACCA +
Preference number: 4 (lower is better)
Translates to: CWTLDCFPSQHRFCWAVIGRSRC*RCSAGP
Trigger: TGGTCCGGCTGAGCACCGCCAACACCTACTCCTACC...GATCACGGCCCAGCAAAAGCGATGCTGAGAGGGGAAACAGTCCAGAGTCCAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562824.5
ENST00000609261.6
CDS-3UTR CCA 90 bp ATCTGTGTAATAAAATCCGTGAGCACGAGGTGGGACGTGCTGGTGTGTGACCGGTCCCAGCAGGCCAAATaGGGGTGGGGAGTAGTGCCG +
Preference number: 4 (lower is better)
Translates to: ICVIKSVSTRWDVLVCDRSQQAK*GWGVVP
Trigger: CGGCACTACTCCCCACCCCCATTTGGCCTGCTGGGA...CCGGTCACACACCAGCACGTCCCACCTCGTGCTCACGGATTTTATTACACAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000562111.1
ENST00000562824.5
ENST00000609261.6
CDS-3UTR CCA 90 bp TGGACTCTGGACTGTTTCCCCTCTCAGCATCGCTTTTGCTGGGCCGTGATCGTCTCCAAAGCTGTAAGCTaGAGCGGTTCCCAGCAGGCC +
Preference number: 4 (lower is better)
Translates to: WTLDCFPSQHRFCWAVIVSKAVS*SGSQQA
Trigger: GGCCTGCTGGGAACCGCTCCAGCTTACAGCTTTGGA...GACGATCACGGCCCAGCAAAAGCGATGCTGAGAGGGGAAACAGTCCAGAGTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562824.5
ENST00000609261.6
CDS-3UTR CCA 90 bp CATGGAGGAGGGAGGTGGGGTGTCTCCCCCAAGCACAGCACTCAACTCTTCACAGTTGGGGTGGAACTCTaGCGTCTTCTCAGGTGGGTA +
Preference number: 4 (lower is better)
Translates to: HGGGRWGVSPKHSTQLFTVGVEL*RLLRWV
Trigger: TACCCACCTGAGAAGACGCCAGAGTTCCACCCCAAC...TGTGAAGAGTTGAGTGCTGTGCTTGGGGGAGACACCCCACCTCCCTCCTCCATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000609261.6
CDS-3UTR CCA 90 bp TGTTGGACTCTGGACTGTTTCCCCTCTCAGCATCGCTTTTGCTGGGCCGTGATCGGAGCCAGGCCAGCGTaGTCTTGTTGGGGTGGAACT +
Preference number: 4 (lower is better)
Translates to: CWTLDCFPSQHRFCWAVIGARPA*SCWGGT
Trigger: AGTTCCACCCCAACAAGACCACGCTGGCCTGGCTCC...GATCACGGCCCAGCAAAAGCGATGCTGAGAGGGGAAACAGTCCAGAGTCCAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000562824.5
ENST00000609261.6
CDS-3UTR CCA 90 bp GTGTCAAGGTTGAGCGTAGCATGCCACCAGCGGTCGGGGAAGTACAGCACCTCATCCTGCCAGCTGTTTTaGCTAGCCGAGGAAGGTGGA +
Preference number: 4 (lower is better)
Translates to: VSRLSVACHQRSGKYSTSSCQLF*LAEEGG
Trigger: TCCACCTTCCTCGGCTAGCCAAAACAGCTGGCAGGA...TGAGGTGCTGTACTTCCCCGACCGCTGGTGGCATGCTACGCTCAACCTTGACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565258.1
CDS-3UTR CCA 90 bp GTGCCCCTGTGCCACAGAAGCGAGACATCCCCGACTACCTGTGTGGCAAGATCATCCTGCCAGCTGTTTTaGCTAGCCGAGGAAGGTGGA +
Preference number: 4 (lower is better)
Translates to: VPLCHRSETSPTTCVARSSCQLF*LAEEGG
Trigger: TCCACCTTCCTCGGCTAGCCAAAACAGCTGGCAGGA...TGATCTTGCCACACAGGTAGTCGGGGATGTCTCGCTTCTGTGGCACAGGGGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000609261.6
CDS-3UTR CCA 90 bp ATCTGTGTAATAAAATCCGTGAGCACGAGGTGGGACGTGCTGGTGTGTGACCGGCGAGGTGGGACGTGCTaGTGTGTGACCGGCAGTCCT +
Preference number: 4 (lower is better)
Translates to: ICVIKSVSTRWDVLVCDRRGGTC*CVTGSP
Trigger: AGGACTGCCGGTCACACACCAGCACGTCCCACCTCG...CCGGTCACACACCAGCACGTCCCACCTCGTGCTCACGGATTTTATTACACAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562111.1
ENST00000562824.5
ENST00000609261.6
CDS-3UTR CCA 90 bp CATGGAGGAGGGAGGTGGGGTGTCTCCCCCAAGCACAGCACTCAACTCTTCACAGTGTGGTCAGACATCTaGCCAGGTCCATCTCTGACC +
Preference number: 4 (lower is better)
Translates to: HGGGRWGVSPKHSTQLFTVWSDI*PGPSLT
Trigger: GGTCAGAGATGGACCTGGCCAGATGTCTGACCACAC...TGTGAAGAGTTGAGTGCTGTGCTTGGGGGAGACACCCCACCTCCCTCCTCCATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609261.6
CDS-3UTR CCA 90 bp TCTGTGTGTGTGCACGTGGCGTGGGAGCATCCCCGCCTTGTGTTGGGTCTGTGCGGCAAGCAGGAAATGTaGGGAAGTGTGGATGTTAGC +
Preference number: 4 (lower is better)
Translates to: SVCVHVAWEHPRLVLGLCGKQEM*GSVDVS
Trigger: GCTAACATCCACACTTCCCCACATTTCCTGCTTGCC...GCACAGACCCAACACAAGGCGGGGATGCTCCCACGCCACGTGCACACACACAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609261.6
3UTR CAA 72 bp TTGGACTCTGGACTGTTTCCCCTCTCAGCATCGCTTTaGCTGGGCCGTGATCGTCCCCCTTTGTGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: LDSGLFPLSASL*LGRDRPPLWAG
Trigger: TCCAGCCCACAAAGGGGGACGATCACGGCCCAGCAAAAGCGATGCTGAGAGGGGAAACAGTCCAGAGTCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562824.5
ENST00000609261.6
CDS-3UTR TCA 90 bp CTGACCGTGTGCCCCTGTGCCACAGAAGCGAGACATCCCCGACTACCTGTGTGGTCCCCAACTTGGCTATaGAGGAGGTTATTGACGCAT +
Preference number: 4 (lower is better)
Translates to: LTVCPCATEARHPRLPVWSPTWL*RRLLTH
Trigger: ATGCGTCAATAACCTCCTTCATAGCCAAGTTGGGGA...CCACACAGGTAGTCGGGGATGTCTCGCTTCTGTGGCACAGGGGCACACGGTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000609261.6
CDS-3UTR TCA 90 bp TGGACTCTGGACTGTTTCCCCTCTCAGCATCGCTTTTGCTGGGCCGTGATCGTCAGATCAGCTTTGAGCTaGTGCGGGAGCCGTGCATCA +
Preference number: 4 (lower is better)
Translates to: WTLDCFPSQHRFCWAVIVRSALS*CGSRAS
Trigger: TGATGCACGGCTCCCGCATCAGCTCAAAGCTGATCT...GACGATCACGGCCCAGCAAAAGCGATGCTGAGAGGGGAAACAGTCCAGAGTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609261.6
CDS-3UTR GCA 90 bp TGTTGGACTCTGGACTGTTTCCCCTCTCAGCATCGCTTTTGCTGGGCCGTGATCAGTAGGTGTTGGCGGTaGTCAGCCGGACCACTCTGT +
Preference number: 4 (lower is better)
Translates to: CWTLDCFPSQHRFCWAVISRCWR*SAGPLC
Trigger: ACAGAGTGGTCCGGCTGAGCACCGCCAACACCTACT...GATCACGGCCCAGCAAAAGCGATGCTGAGAGGGGAAACAGTCCAGAGTCCAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562824.5
ENST00000609261.6
CDS-3UTR GCA 90 bp ATCTGTGTAATAAAATCCGTGAGCACGAGGTGGGACGTGCTGGTGTGTGACCGGAGGTTGAGCGTAGCATaGCACCAGCGGTCGGGGAAG +
Preference number: 4 (lower is better)
Translates to: ICVIKSVSTRWDVLVCDRRLSVA*HQRSGK
Trigger: CTTCCCCGACCGCTGGTGGCATGCTACGCTCAACCT...CCGGTCACACACCAGCACGTCCCACCTCGTGCTCACGGATTTTATTACACAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000562111.1
ENST00000562824.5
ENST00000609261.6
CDS-3UTR GCA 90 bp TGTTGGACTCTGGACTGTTTCCCCTCTCAGCATCGCTTTTGCTGGGCCGTGATCTCTCAGCATCGCTTTTaGTGGGCCGTGATCGTCCCC +
Preference number: 4 (lower is better)
Translates to: CWTLDCFPSQHRFCWAVISQHRF*WAVIVP
Trigger: GGGGACGATCACGGCCCAGCAAAAGCGATGCTGAGA...GATCACGGCCCAGCAAAAGCGATGCTGAGAGGGGAAACAGTCCAGAGTCCAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000562824.5
ENST00000609261.6
CDS-3UTR GCA 90 bp ATCTGTGTAATAAAATCCGTGAGCACGAGGTGGGACGTGCTGGTGTGTGACCGGTTGTCCGTGAGTCCCTaGAGGATGACGGGCCTGACG +
Preference number: 4 (lower is better)
Translates to: ICVIKSVSTRWDVLVCDRLSVSP*RMTGLT
Trigger: CGTCAGGCCCGTCATCCTGCAGGGACTCACGGACAA...CCGGTCACACACCAGCACGTCCCACCTCGTGCTCACGGATTTTATTACACAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562111.1
ENST00000562824.5
ENST00000609261.6
CDS-3UTR GCA 90 bp TGTTGGACTCTGGACTGTTTCCCCTCTCAGCATCGCTTTTGCTGGGCCGTGATCACTACTGAGGTTCCCTaGCCTACCTGGCGTCCTGGT +
Preference number: 4 (lower is better)
Translates to: CWTLDCFPSQHRFCWAVITTEVP*PTWRPG
Trigger: ACCAGGACGCCAGGTAGGGCAGGGAACCTCAGTAGT...GATCACGGCCCAGCAAAAGCGATGCTGAGAGGGGAAACAGTCCAGAGTCCAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609261.6
CDS-3UTR GCA 90 bp AGGTGGGGTGTCTCCCCCAAGCACAGCACTCAACTCTTCACAGGACAAGTACATGACCGTGTGCCCCTGTaGCACAGAAGCGAGACATCC +
Preference number: 4 (lower is better)
Translates to: RWGVSPKHSTQLFTGQVHDRVPL*HRSETS
Trigger: GGATGTCTCGCTTCTGTGGCACAGGGGCACACGGTC...ATGTACTTGTCCTGTGAAGAGTTGAGTGCTGTGCTTGGGGGAGACACCCCACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000609261.6
CDS-3UTR GCA 90 bp AGGTGGGGTGTCTCCCCCAAGCACAGCACTCAACTCTTCACAGGACAAGTACATGCTGGCAGGTGCTCGTaGAGTGCCCCTTTTCAGCCT +
Preference number: 4 (lower is better)
Translates to: RWGVSPKHSTQLFTGQVHAGRCS*SAPFQP
Trigger: AGGCTGAAAAGGGGCACTGCACGAGCACCTGCCAGC...ATGTACTTGTCCTGTGAAGAGTTGAGTGCTGTGCTTGGGGGAGACACCCCACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000609261.6
CDS-3UTR GCA 90 bp ATCTGTGTAATAAAATCCGTGAGCACGAGGTGGGACGTGCTGGTGTGTGACCGGGTGTGTGTCGCTTGCTaGCGATGGCTGGCAGGTGCT +
Preference number: 4 (lower is better)
Translates to: ICVIKSVSTRWDVLVCDRVCVAC*RWLAGA
Trigger: AGCACCTGCCAGCCATCGGCAGCAAGCGACACACAC...CCGGTCACACACCAGCACGTCCCACCTCGTGCTCACGGATTTTATTACACAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609261.6
CDS-3UTR CCA 90 bp ATCTGTGTAATAAAATCCGTGAGCACGAGGTGGGACGTGCTGGTGTGTGACCGGGGTAGGAGTAGGTGTTaGCGGTGCTCAGCCGGACCA +
Preference number: 4 (lower is better)
Translates to: ICVIKSVSTRWDVLVCDRGRSRC*RCSAGP
Trigger: TGGTCCGGCTGAGCACCGCCAACACCTACTCCTACC...CCGGTCACACACCAGCACGTCCCACCTCGTGCTCACGGATTTTATTACACAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000562111.1
ENST00000562824.5
ENST00000609261.6
CDS-3UTR CCA 90 bp TGGACTCTGGACTGTTTCCCCTCTCAGCATCGCTTTTGCTGGGCCGTGATCGTCGTTGGGGTGGAACTCTaGCGTCTTCTCAGGTGGGTA +
Preference number: 4 (lower is better)
Translates to: WTLDCFPSQHRFCWAVIVVGVEL*RLLRWV
Trigger: TACCCACCTGAGAAGACGCCAGAGTTCCACCCCAAC...GACGATCACGGCCCAGCAAAAGCGATGCTGAGAGGGGAAACAGTCCAGAGTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000562824.5
ENST00000609261.6
CDS-3UTR CCA 90 bp CATGGAGGAGGGAGGTGGGGTGTCTCCCCCAAGCACAGCACTCAACTCTTCACAGTGGTCTTGTTGGGGTaGAACTCTGGCGTCTTCTCA +
Preference number: 4 (lower is better)
Translates to: HGGGRWGVSPKHSTQLFTVVLLG*NSGVFS
Trigger: TGAGAAGACGCCAGAGTTCCACCCCAACAAGACCAC...TGTGAAGAGTTGAGTGCTGTGCTTGGGGGAGACACCCCACCTCCCTCCTCCATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000609261.6
CDS-3UTR CCA 90 bp TGTTGGACTCTGGACTGTTTCCCCTCTCAGCATCGCTTTTGCTGGGCCGTGATCCCAGCGTGGTCTTGTTaGGGTGGAACTCTGGCGTCT +
Preference number: 4 (lower is better)
Translates to: CWTLDCFPSQHRFCWAVIPAWSC*GGTLAS
Trigger: AGACGCCAGAGTTCCACCCCAACAAGACCACGCTGG...GATCACGGCCCAGCAAAAGCGATGCTGAGAGGGGAAACAGTCCAGAGTCCAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562824.5
ENST00000609261.6
CDS-3UTR CCA 90 bp TGGACTCTGGACTGTTTCCCCTCTCAGCATCGCTTTTGCTGGGCCGTGATCGTCTCCTGCCAGCTGTTTTaGCTAGCCGAGGAAGGTGGA +
Preference number: 4 (lower is better)
Translates to: WTLDCFPSQHRFCWAVIVSCQLF*LAEEGG
Trigger: TCCACCTTCCTCGGCTAGCCAAAACAGCTGGCAGGA...GACGATCACGGCCCAGCAAAAGCGATGCTGAGAGGGGAAACAGTCCAGAGTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000562824.5
ENST00000609261.6
CDS-3UTR CCA 90 bp ATCTGTGTAATAAAATCCGTGAGCACGAGGTGGGACGTGCTGGTGTGTGACCGGTCCGTGAGCACGAGGTaGGACGTGCTGGTGTGTGAC +
Preference number: 4 (lower is better)
Translates to: ICVIKSVSTRWDVLVCDRSVSTR*DVLVCD
Trigger: GTCACACACCAGCACGTCCCACCTCGTGCTCACGGA...CCGGTCACACACCAGCACGTCCCACCTCGTGCTCACGGATTTTATTACACAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562111.1
ENST00000562824.5
ENST00000609261.6
CDS-3UTR TCA 90 bp ATCTGTGTAATAAAATCCGTGAGCACGAGGTGGGACGTGCTGGTGTGTGACCGGGAGAGGCCCACTCGGTaGAGTTGTTGTCCCCGAAGA +
Preference number: 4 (lower is better)
Translates to: ICVIKSVSTRWDVLVCDRERPTR*SCCPRR
Trigger: TCTTCGGGGACAACAACTTCACCGAGTGGGCCTCTC...CCGGTCACACACCAGCACGTCCCACCTCGTGCTCACGGATTTTATTACACAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000562111.1
ENST00000562824.5
ENST00000609261.6
CDS-3UTR TCA 90 bp AGGTGGGGTGTCTCCCCCAAGCACAGCACTCAACTCTTCACAGGACAAGTACATGAGAGGCCCACTCGGTaGAGTTGTTGTCCCCGAAGA +
Preference number: 4 (lower is better)
Translates to: RWGVSPKHSTQLFTGQVHERPTR*SCCPRR
Trigger: TCTTCGGGGACAACAACTTCACCGAGTGGGCCTCTC...ATGTACTTGTCCTGTGAAGAGTTGAGTGCTGTGCTTGGGGGAGACACCCCACCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000609261.6
CDS-3UTR GCA 90 bp ATCTGTGTAATAAAATCCGTGAGCACGAGGTGGGACGTGCTGGTGTGTGACCGGAGTAGGTGTTGGCGGTaGTCAGCCGGACCACTCTGT +
Preference number: 4 (lower is better)
Translates to: ICVIKSVSTRWDVLVCDRSRCWR*SAGPLC
Trigger: ACAGAGTGGTCCGGCTGAGCACCGCCAACACCTACT...CCGGTCACACACCAGCACGTCCCACCTCGTGCTCACGGATTTTATTACACAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562111.1
ENST00000562824.5
ENST00000609261.6
CDS-3UTR GCA 90 bp AGGTGGGGTGTCTCCCCCAAGCACAGCACTCAACTCTTCACAGGACAAGTACATAGTAGGTGTTGGCGGTaGTCAGCCGGACCACTCTGT +
Preference number: 4 (lower is better)
Translates to: RWGVSPKHSTQLFTGQVHSRCWR*SAGPLC
Trigger: ACAGAGTGGTCCGGCTGAGCACCGCCAACACCTACT...ATGTACTTGTCCTGTGAAGAGTTGAGTGCTGTGCTTGGGGGAGACACCCCACCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609261.6
CDS-3UTR GCA 90 bp ATCTGTGTAATAAAATCCGTGAGCACGAGGTGGGACGTGCTGGTGTGTGACCGGAGTACAGGGTGTCATTaGCCAGGGAGGTGGGGTCCT +
Preference number: 4 (lower is better)
Translates to: ICVIKSVSTRWDVLVCDRSTGCH*PGRWGP
Trigger: AGGACCCCACCTCCCTGGGCAATGACACCCTGTACT...CCGGTCACACACCAGCACGTCCCACCTCGTGCTCACGGATTTTATTACACAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000562111.1
ENST00000562824.5
ENST00000609261.6
CDS-3UTR GCA 90 bp ATCTGTGTAATAAAATCCGTGAGCACGAGGTGGGACGTGCTGGTGTGTGACCGGTGTGACCGGCAGTCCTaGCAGCTGTTTTGGCTAGCC +
Preference number: 4 (lower is better)
Translates to: ICVIKSVSTRWDVLVCDRCDRQS*QLFWLA
Trigger: GGCTAGCCAAAACAGCTGGCAGGACTGCCGGTCACA...CCGGTCACACACCAGCACGTCCCACCTCGTGCTCACGGATTTTATTACACAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000562111.1
ENST00000562824.5
ENST00000609261.6
CDS-3UTR GCA 90 bp AGGTGGGGTGTCTCCCCCAAGCACAGCACTCAACTCTTCACAGGACAAGTACATCCCATGACTGCCCTCTaGCCTTCTTGTCACTGCAGC +
Preference number: 4 (lower is better)
Translates to: RWGVSPKHSTQLFTGQVHPMTAL*PSCHCS
Trigger: GCTGCAGTGACAAGAAGGGCAGAGGGCAGTCATGGG...ATGTACTTGTCCTGTGAAGAGTTGAGTGCTGTGCTTGGGGGAGACACCCCACCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609261.6
CDS-3UTR GCA 90 bp AGGTGGGGTGTCTCCCCCAAGCACAGCACTCAACTCTTCACAGGACAAGTACATAGGGAGCTGGAAGAGTaGCAGCGAAACCACGAGGGT +
Preference number: 4 (lower is better)
Translates to: RWGVSPKHSTQLFTGQVHRELEE*QRNHEG
Trigger: ACCCTCGTGGTTTCGCTGGCACTCTTCCAGCTCCCT...ATGTACTTGTCCTGTGAAGAGTTGAGTGCTGTGCTTGGGGGAGACACCCCACCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609261.6
CDS-3UTR CCA 90 bp ATCTGTGTAATAAAATCCGTGAGCACGAGGTGGGACGTGCTGGTGTGTGACCGGTCCAAAGCTGTAAGCTaGAGCGGTTCCCAGCAGGCC +
Preference number: 4 (lower is better)
Translates to: ICVIKSVSTRWDVLVCDRSKAVS*SGSQQA
Trigger: GGCCTGCTGGGAACCGCTCCAGCTTACAGCTTTGGA...CCGGTCACACACCAGCACGTCCCACCTCGTGCTCACGGATTTTATTACACAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562111.1
ENST00000562824.5
ENST00000609261.6
CDS-3UTR CCA 90 bp TGTTGGACTCTGGACTGTTTCCCCTCTCAGCATCGCTTTTGCTGGGCCGTGATCCATAGTTTATGTTCCTaGCCACCCCGACCGCTTCCC +
Preference number: 4 (lower is better)
Translates to: CWTLDCFPSQHRFCWAVIHSLCS*PPRPLP
Trigger: GGGAAGCGGTCGGGGTGGCCAGGAACATAAACTATG...GATCACGGCCCAGCAAAAGCGATGCTGAGAGGGGAAACAGTCCAGAGTCCAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000562824.5
ENST00000609261.6
CDS-3UTR TCA 90 bp ATCTGTGTAATAAAATCCGTGAGCACGAGGTGGGACGTGCTGGTGTGTGACCGGACCGTAGATCACTTCTaGGTACCCGGGTCCATGCCA +
Preference number: 4 (lower is better)
Translates to: ICVIKSVSTRWDVLVCDRTVDHF*VPGSMP
Trigger: TGGCATGGACCCGGGTACTCAGAAGTGATCTACGGT...CCGGTCACACACCAGCACGTCCCACCTCGTGCTCACGGATTTTATTACACAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562111.1
ENST00000562824.5
ENST00000609261.6
CDS-3UTR TCA 90 bp TGTTGGACTCTGGACTGTTTCCCCTCTCAGCATCGCTTTTGCTGGGCCGTGATCATGAGAAGAGGAAGGTaGGTGTGTGTCGCTTGCTGC +
Preference number: 4 (lower is better)
Translates to: CWTLDCFPSQHRFCWAVIMRRGR*VCVACC
Trigger: GCAGCAAGCGACACACACTCACCTTCCTCTTCTCAT...GATCACGGCCCAGCAAAAGCGATGCTGAGAGGGGAAACAGTCCAGAGTCCAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609261.6
CDS-3UTR CCA 90 bp TGGACTCTGGACTGTTTCCCCTCTCAGCATCGCTTTTGCTGGGCCGTGATCGTCTGCTCCACATACTCCTaGAAGGGCAAGTCCACTTTG +
Preference number: 4 (lower is better)
Translates to: WTLDCFPSQHRFCWAVIVCSTYS*KGKSTL
Trigger: CAAAGTGGACTTGCCCTTCCAGGAGTATGTGGAGCA...GACGATCACGGCCCAGCAAAAGCGATGCTGAGAGGGGAAACAGTCCAGAGTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562824.5
ENST00000609261.6
CDS-3UTR CCA 90 bp TGTTGGACTCTGGACTGTTTCCCCTCTCAGCATCGCTTTTGCTGGGCCGTGATCTGGCGTCTTCTCAGGTaGGTAAAGGAACCAGCGCTT +
Preference number: 4 (lower is better)
Translates to: CWTLDCFPSQHRFCWAVIWRLLR*VKEPAL
Trigger: AAGCGCTGGTTCCTTTACCCACCTGAGAAGACGCCA...GATCACGGCCCAGCAAAAGCGATGCTGAGAGGGGAAACAGTCCAGAGTCCAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562824.5
ENST00000609261.6
CDS-3UTR CCA 90 bp TGTTGGACTCTGGACTGTTTCCCCTCTCAGCATCGCTTTTGCTGGGCCGTGATCGTGGTCTTGTTGGGGTaGAACTCTGGCGTCTTCTCA +
Preference number: 4 (lower is better)
Translates to: CWTLDCFPSQHRFCWAVIVVLLG*NSGVFS
Trigger: TGAGAAGACGCCAGAGTTCCACCCCAACAAGACCAC...GATCACGGCCCAGCAAAAGCGATGCTGAGAGGGGAAACAGTCCAGAGTCCAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000562824.5
ENST00000609261.6
CDS-3UTR CCA 90 bp ATCTGTGTAATAAAATCCGTGAGCACGAGGTGGGACGTGCTGGTGTGTGACCGGTCCTGCCAGCTGTTTTaGCTAGCCGAGGAAGGTGGA +
Preference number: 4 (lower is better)
Translates to: ICVIKSVSTRWDVLVCDRSCQLF*LAEEGG
Trigger: TCCACCTTCCTCGGCTAGCCAAAACAGCTGGCAGGA...CCGGTCACACACCAGCACGTCCCACCTCGTGCTCACGGATTTTATTACACAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000562111.1
ENST00000562824.5
ENST00000609261.6
CDS-3UTR CCA 90 bp ATCTGTGTAATAAAATCCGTGAGCACGAGGTGGGACGTGCTGGTGTGTGACCGGCATAGTTTATGTTCCTaGCCACCCCGACCGCTTCCC +
Preference number: 4 (lower is better)
Translates to: ICVIKSVSTRWDVLVCDRHSLCS*PPRPLP
Trigger: GGGAAGCGGTCGGGGTGGCCAGGAACATAAACTATG...CCGGTCACACACCAGCACGTCCCACCTCGTGCTCACGGATTTTATTACACAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562824.5
ENST00000609261.6
CDS-3UTR CCA 90 bp GTGCCCCTGTGCCACAGAAGCGAGACATCCCCGACTACCTGTGTGGCAAGATCATATCGAAGGCTTTACTaGCAAGCAGGAAATGTGGGG +
Preference number: 4 (lower is better)
Translates to: VPLCHRSETSPTTCVARSYRRLY*QAGNVG
Trigger: CCCCACATTTCCTGCTTGCCAGTAAAGCCTTCGATA...TGATCTTGCCACACAGGTAGTCGGGGATGTCTCGCTTCTGTGGCACAGGGGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609261.6
CDS-3UTR CCA 90 bp AGGTGGGGTGTCTCCCCCAAGCACAGCACTCAACTCTTCACAGGACAAGTACATTCTGAGATTGGGGTGTaGTCAGACATCTGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: RWGVSPKHSTQLFTGQVHSEIGV*SDIWPG
Trigger: ACCTGGCCAGATGTCTGACCACACCCCAATCTCAGA...ATGTACTTGTCCTGTGAAGAGTTGAGTGCTGTGCTTGGGGGAGACACCCCACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000609261.6
3UTR CAA 72 bp AGGAAATGTGGGGAAGTGTGGATGTTAGCTCTGAGATaGGGGTGTGGTCAGACATCTGGCCAGGTCCATCTC +
Preference number: 4 (lower is better)
Translates to: RKCGEVWMLALR*GCGQTSGQVHL
Trigger: GAGATGGACCTGGCCAGATGTCTGACCACACCCCAATCTCAGAGCTAACATCCACACTTCCCCACATTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609261.6
CDS-3UTR CCA 90 bp ATCTGTGTAATAAAATCCGTGAGCACGAGGTGGGACGTGCTGGTGTGTGACCGGTGCTCCACATACTCCTaGAAGGGCAAGTCCACTTTG +
Preference number: 4 (lower is better)
Translates to: ICVIKSVSTRWDVLVCDRCSTYS*KGKSTL
Trigger: CAAAGTGGACTTGCCCTTCCAGGAGTATGTGGAGCA...CCGGTCACACACCAGCACGTCCCACCTCGTGCTCACGGATTTTATTACACAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562111.1
ENST00000562824.5
ENST00000609261.6
CDS-3UTR CCA 90 bp TGGACTCTGGACTGTTTCCCCTCTCAGCATCGCTTTTGCTGGGCCGTGATCGTCAAATGTGGGGAAGTGTaGATGTTAGCTCTGAGATTG +
Preference number: 4 (lower is better)
Translates to: WTLDCFPSQHRFCWAVIVKCGEV*MLALRL
Trigger: CAATCTCAGAGCTAACATCCACACTTCCCCACATTT...GACGATCACGGCCCAGCAAAAGCGATGCTGAGAGGGGAAACAGTCCAGAGTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000609261.6
CDS TCA 90 bp CAGCCGCCAGCGCCCAGAGCGCGAGCAACCGCGACGCCGGCGCCATaGGCCTGCCGCCCTCAGGCAGCCGCGCTGCACGCCGGGAACCTT +
Preference number: 5 (lower is better)
Translates to: QPPAPRARATATPAP*ACRPQAAALHAGNL
Trigger: AAGGTTCCCGGCGTGCAGCGCGGCTGCCTGAGGGCGGCAGGCTCATGGCGCCGGCGTCGCGGTTGCTCGCGCTCTGGGCGCTGGCGGCTG
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562824.5
ENST00000567120.5
CDS CCA 90 bp CAGCCGCGCTGCACGCCGGGAACCTTGGGCCCATCCGCCAGCCATTaGCCGGCAGCTTCGTCGTCGTGGCAACGGCCGGGAACCGGGACG +
Preference number: 5 (lower is better)
Translates to: QPRCTPGTLGPSASH*PAASSSWQRPGTGT
Trigger: CGTCCCGGTTCCCGGCCGTTGCCACGACGACGAAGCTGCCGGCCAATGGCTGGCGGATGGGCCCAAGGTTCCCGGCGTGCAGCGCGGCTG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567120.5
CDS GCA 90 bp CCGGGGACGGACGGGCACGCGCTCACCGAGTTGTCCGTGAGTCCCTaGAGGATGACGGGCCTGACGAAGGCGTACCACCCGCCGTCGCCC +
Preference number: 5 (lower is better)
Translates to: PGTDGHALTELSVSP*RMTGLTKAYHPPSP
Trigger: GGGCGACGGCGGGTGGTACGCCTTCGTCAGGCCCGTCATCCTGCAGGGACTCACGGACAACTCGGTGAGCGCGTGCCCGTCCGTCCCCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565302.5
CDS CCA 90 bp ATGAGCCTGCCGCCCTCAGGCAGCCGCGCTGCACGCCGGGAACCTTaGGCCCATCCGCCAGCCATTGGCCGGCAGCTTCGTCGTCGTGGC +
Preference number: 5 (lower is better)
Translates to: MSLPPSGSRAARREP*AHPPAIGRQLRRRG
Trigger: GCCACGACGACGAAGCTGCCGGCCAATGGCTGGCGGATGGGCCCAAGGTTCCCGGCGTGCAGCGCGGCTGCCTGAGGGCGGCAGGCTCAT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567120.5
CDS CCA 90 bp TGGCAACGGCCGGGAACCGGGACGGACCCCGGAAGTGACCTCCTTTaGCCCGCCCCGGAAGAGGCCTCTACGGGAGGCACTGGGAAGGCC +
Preference number: 5 (lower is better)
Translates to: WQRPGTGTDPGSDLL*PAPEEASTGGTGKA
Trigger: GGCCTTCCCAGTGCCTCCCGTAGAGGCCTCTTCCGGGGCGGGCCAAAGGAGGTCACTTCCGGGGTCCGTCCCGGTTCCCGGCCGTTGCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567120.5
CDS TCA 90 bp TCCGCGATCAGGGGCGCACGTACTGCTGCACGAACTCCGCGTAGGTaGGGTCGGCCCGACGCTCCACCGTGCAGCGCTCCTCCTCCGCCA +
Preference number: 5 (lower is better)
Translates to: SAIRGARTAARTPRR*GRPDAPPCSAPPPP
Trigger: TGGCGGAGGAGGAGCGCTGCACGGTGGAGCGTCGGGCCGACCTCACCTACGCGGAGTTCGTGCAGCAGTACGTGCGCCCCTGATCGCGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000563088.5
ENST00000566199.1
ENST00000567901.1
ENST00000569396.5
ENST00000569441.5
CDS TCA 90 bp TTCGTCGTCGTGGCAACGGCCGGGAACCGGGACGGACCCCGGAAGTaGCCTCCTTTGGCCCGCCCCGGAAGAGGCCTCTACGGGAGGCAC +
Preference number: 5 (lower is better)
Translates to: FVVVATAGNRDGPRK*PPLARPGRGLYGRH
Trigger: GTGCCTCCCGTAGAGGCCTCTTCCGGGGCGGGCCAAAGGAGGTCACTTCCGGGGTCCGTCCCGGTTCCCGGCCGTTGCCACGACGACGAA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567120.5
CDS GCA 90 bp CCAGCCACTGACCTCACCAGCCCGGATGGTACACTCCAGGGGCCGTaGAGACGGTGGCAGGGCTGGGTATGTGTCCCGGAGCCAGGCCAG +
Preference number: 5 (lower is better)
Translates to: PATDLTSPDGTLQGP*RRWQGWVCVPEPGQ
Trigger: CTGGCCTGGCTCCGGGACACATACCCAGCCCTGCCACCGTCTGCACGGCCCCTGGAGTGTACCATCCGGGCTGGTGAGGTCAGTGGCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565302.5
CDS CCA 90 bp ACCTTGGGCCCATCCGCCAGCCATTGGCCGGCAGCTTCGTCGTCGTaGCAACGGCCGGGAACCGGGACGGACCCCGGAAGTGACCTCCTT +
Preference number: 5 (lower is better)
Translates to: TLGPSASHWPAASSS*QRPGTGTDPGSDLL
Trigger: AAGGAGGTCACTTCCGGGGTCCGTCCCGGTTCCCGGCCGTTGCCACGACGACGAAGCTGCCGGCCAATGGCTGGCGGATGGGCCCAAGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567120.5
CDS-3UTR CAA 90 bp CAGGGGCCGTGCAGACGGTGGCAGGGCTGGGTATGTGTCCCGGAGCCAGGCCAGGCCAGCGTGGTCTTGTaGGGGTGGAACTCTGGCGTC +
Preference number: 5 (lower is better)
Translates to: QGPCRRWQGWVCVPEPGQASVVL*GWNSGV
Trigger: GACGCCAGAGTTCCACCCCAACAAGACCACGCTGGC...CTGGCCTGGCTCCGGGACACATACCCAGCCCTGCCACCGTCTGCACGGCCCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565258.1
CDS GCA 90 bp TCGGGGAAGTACAGCACCAGCCCGGATGGTACACTCCAGGGGCCGTaGAGACGGTGGCAGGGCTGGGTATGTGTCCCGGAGCCAGGCCAG +
Preference number: 5 (lower is better)
Translates to: SGKYSTSPDGTLQGP*RRWQGWVCVPEPGQ
Trigger: CTGGCCTGGCTCCGGGACACATACCCAGCCCTGCCACCGTCTGCACGGCCCCTGGAGTGTACCATCCGGGCTGGTGCTGTACTTCCCCGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568689.5
CDS GCA 90 bp CCGGGGACGGACGGGCACGCGCTCACCGAGTTGTCCGTGAGTCCCTaGAGGATGACGGGCCTGACGAAGGCGTACTGCTGCACGAACTCC +
Preference number: 5 (lower is better)
Translates to: PGTDGHALTELSVSP*RMTGLTKAYCCTNS
Trigger: GGAGTTCGTGCAGCAGTACGCCTTCGTCAGGCCCGTCATCCTGCAGGGACTCACGGACAACTCGGTGAGCGCGTGCCCGTCCGTCCCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570037.5
CDS CCA 90 bp CCGCCGCCTAGGGCTGCCTCACCATTGCCCAGGGAGGTGGGGTCCTaGGGGTGCAGCAGCTGCTCCACATACTCCTGGAAGGGCAAGTCC +
Preference number: 5 (lower is better)
Translates to: PPPRAASPLPREVGS*GCSSCSTYSWKGKS
Trigger: GGACTTGCCCTTCCAGGAGTATGTGGAGCAGCTGCTGCACCCCCAGGACCCCACCTCCCTGGGCAATGGTGAGGCAGCCCTAGGCGGCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000567901.1
ENST00000568689.5
ENST00000569441.5
CDS CCA 90 bp GACCTCACCAGCCCGGATGGTACACTCCAGGGGCCGTGCAGACGGTaGCAGGGCTGGGTATGTGTCCCGGAGCCAGGCCAGCGTGGTCTT +
Preference number: 5 (lower is better)
Translates to: DLTSPDGTLQGPCRR*QGWVCVPEPGQRGL
Trigger: AAGACCACGCTGGCCTGGCTCCGGGACACATACCCAGCCCTGCCACCGTCTGCACGGCCCCTGGAGTGTACCATCCGGGCTGGTGAGGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565302.5
CDS GCA 90 bp CCGGGGACGGACGGGCACGCGCTCACCGAGTTGTCCGTGAGTCCCTaGAGGATGACGGGCCTGACGAAGGCGTACCTGGAAAGAAGGGCA +
Preference number: 5 (lower is better)
Translates to: PGTDGHALTELSVSP*RMTGLTKAYLERRA
Trigger: TGCCCTTCTTTCCAGGTACGCCTTCGTCAGGCCCGTCATCCTGCAGGGACTCACGGACAACTCGGTGAGCGCGTGCCCGTCCGTCCCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567901.1
CDS CCA 90 bp TACAGCACCAGCCCGGATGGTACACTCCAGGGGCCGTGCAGACGGTaGCAGGGCTGGGTATGTGTCCCGGAGCCAGGCCAGCGTGGTCTT +
Preference number: 5 (lower is better)
Translates to: YSTSPDGTLQGPCRR*QGWVCVPEPGQRGL
Trigger: AAGACCACGCTGGCCTGGCTCCGGGACACATACCCAGCCCTGCCACCGTCTGCACGGCCCCTGGAGTGTACCATCCGGGCTGGTGCTGTA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568689.5
CDS-3UTR CAA 90 bp TGGCGTGGGAGCATCCCCGCCTTGTGTTGGGTCTGTGCCCCATGGAGGAGGGAGGGGAGCATCCCCGCCTaGTGTTGGGTCTGTGCCCCA +
Preference number: 5 (lower is better)
Translates to: WRGSIPALCWVCAPWRREGSIPA*CWVCAP
Trigger: TGGGGCACAGACCCAACACAAGGCGGGGATGCTCCC...CTCCCTCCTCCATGGGGCACAGACCCAACACAAGGCGGGGATGCTCCCACGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000609261.6
CDS-3UTR CAA 90 bp GGAGATGAAGACGCTGGTGTCAAGGTTGAGCGTAGCATGCCACCAGCGGTCGGGCAGGCCAGCGTGGTCTaGTTGGGGTGGAACTCTGGC +
Preference number: 5 (lower is better)
Translates to: GDEDAGVKVERSMPPAVGQASVV*LGWNSG
Trigger: GCCAGAGTTCCACCCCAACAAGACCACGCTGGCCTG...CCCGACCGCTGGTGGCATGCTACGCTCAACCTTGACACCAGCGTCTTCATCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565258.1
CDS-3UTR CAA 90 bp AGACGGTGGCAGGGCTGGGTATGTGTCCCGGAGCCAGGCCAGCGTGGTCTTGTTACGCTGGTGTCAAGGTaGAGCGTAGCATGCCACCAG +
Preference number: 5 (lower is better)
Translates to: RRWQGWVCVPEPGQRGLVTLVSR*SVACHQ
Trigger: CTGGTGGCATGCTACGCTCAACCTTGACACCAGCGT...AACAAGACCACGCTGGCCTGGCTCCGGGACACATACCCAGCCCTGCCACCGTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565258.1
CDS GCA 90 bp TCCGTGAGCACGAGGTGGGACGTGCTGGTGTGTGACCGGCAGTCCTaGCAGCTGTTTTGGCTAGCCGAGGAAGGTGGAGATGAAGACGCT +
Preference number: 5 (lower is better)
Translates to: SVSTRWDVLVCDRQS*QLFWLAEEGGDEDA
Trigger: AGCGTCTTCATCTCCACCTTCCTCGGCTAGCCAAAACAGCTGGCAGGACTGCCGGTCACACACCAGCACGTCCCACCTCGTGCTCACGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000562111.1
ENST00000562824.5
ENST00000563088.5
ENST00000564436.5
ENST00000565302.5
ENST00000567120.5
ENST00000568313.1
ENST00000568689.5
ENST00000569441.5
ENST00000570037.5
ENST00000609261.6
CDS GCA 90 bp GGCCCACTCGGTGAAGTTGTTGTCCCCGAAGAAGTACAGGGTGTCTaGCAACAGAGACGGCGGGGACAGGGATCCTGGCACCTGGAGACT +
Preference number: 5 (lower is better)
Translates to: GPLGEVVVPEEVQGV*QQRRRGQGSWHLET
Trigger: AGTCTCCAGGTGCCAGGATCCCTGTCCCCGCCGTCTCTGTTGGCAGACACCCTGTACTTCTTCGGGGACAACAACTTCACCGAGTGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000564436.5
ENST00000567901.1
ENST00000568689.5
ENST00000569441.5
CDS-3UTR CAA 90 bp TGGCGTGGGAGCATCCCCGCCTTGTGTTGGGTCTGTGCCCCATGGAGGAGGGAGCACTCGGTGAAGTTGTaGTCCCCGAAGAAGTACAGG +
Preference number: 5 (lower is better)
Translates to: WRGSIPALCWVCAPWRREHSVKL*SPKKYR
Trigger: CCTGTACTTCTTCGGGGACAACAACTTCACCGAGTG...CTCCCTCCTCCATGGGGCACAGACCCAACACAAGGCGGGGATGCTCCCACGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000609261.6
CDS-3UTR CAA 90 bp GGAGATGAAGACGCTGGTGTCAAGGTTGAGCGTAGCATGCCACCAGCGGTCGGGGTCCTGCCAGCTGTTTaGGCTAGCCGAGGAAGGTGG +
Preference number: 5 (lower is better)
Translates to: GDEDAGVKVERSMPPAVGVLPAV*ASRGRW
Trigger: CCACCTTCCTCGGCTAGCCAAAACAGCTGGCAGGAC...CCCGACCGCTGGTGGCATGCTACGCTCAACCTTGACACCAGCGTCTTCATCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565258.1
CDS-3UTR CAA 90 bp TGGACTCTGGACTGTTTCCCCTCTCAGCATCGCTTTTGCTGGGCCGTGATCGTCGCCCGGAACCTCGAGTaGTCCGTGAGTCCCTGCAGG +
Preference number: 5 (lower is better)
Translates to: WTLDCFPSQHRFCWAVIVARNLE*SVSPCR
Trigger: CCTGCAGGGACTCACGGACAACTCGAGGTTCCGGGC...GACGATCACGGCCCAGCAAAAGCGATGCTGAGAGGGGAAACAGTCCAGAGTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562824.5
ENST00000609261.6
CDS GCA 90 bp AGGAAGGTGGAGATGAAGACGCTGGTGTCAAGGTTGAGCGTAGCATaGCACCAGCGGTCGGGGAAGTACAGCACCTGGTGGAGGAAGGGG +
Preference number: 5 (lower is better)
Translates to: RKVEMKTLVSRLSVA*HQRSGKYSTWWRKG
Trigger: CCCCTTCCTCCACCAGGTGCTGTACTTCCCCGACCGCTGGTGGCATGCTACGCTCAACCTTGACACCAGCGTCTTCATCTCCACCTTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565302.5
CDS-3UTR CAA 90 bp TGGACTCTGGACTGTTTCCCCTCTCAGCATCGCTTTTGCTGGGCCGTGATCGTCGCCAGCGTGGTCTTGTaGGGGTGGAACTCTGGCGTC +
Preference number: 5 (lower is better)
Translates to: WTLDCFPSQHRFCWAVIVASVVL*GWNSGV
Trigger: GACGCCAGAGTTCCACCCCAACAAGACCACGCTGGC...GACGATCACGGCCCAGCAAAAGCGATGCTGAGAGGGGAAACAGTCCAGAGTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000562824.5
ENST00000609261.6
CDS-3UTR CAA 90 bp GTGCCCCTGTGCCACAGAAGCGAGACATCCCCGACTACCTGTGTGGCAAGATCAGTCCTGCCAGCTGTTTaGGCTAGCCGAGGAAGGTGG +
Preference number: 5 (lower is better)
Translates to: VPLCHRSETSPTTCVARSVLPAV*ASRGRW
Trigger: CCACCTTCCTCGGCTAGCCAAAACAGCTGGCAGGAC...TGATCTTGCCACACAGGTAGTCGGGGATGTCTCGCTTCTGTGGCACAGGGGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609261.6
CDS-3UTR CAA 90 bp TGGACTCTGGACTGTTTCCCCTCTCAGCATCGCTTTTGCTGGGCCGTGATCGTCGTGAGTGTGTGTCGCTaGCTGCCGATGGCTGGCAGG +
Preference number: 5 (lower is better)
Translates to: WTLDCFPSQHRFCWAVIVVSVCR*LPMAGR
Trigger: CCTGCCAGCCATCGGCAGCAAGCGACACACACTCAC...GACGATCACGGCCCAGCAAAAGCGATGCTGAGAGGGGAAACAGTCCAGAGTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609261.6
CDS GCA 90 bp CCTGGAAGGGCAAGTCCACTTTGTGGTAGGAGTAGGTGTTGGCGGTaGTCAGCCGGACCACTCTGTCCCCAAACGAAGCCAGCAACCTGT +
Preference number: 5 (lower is better)
Translates to: PGRASPLCGRSRCWR*SAGPLCPQTKPATC
Trigger: ACAGGTTGCTGGCTTCGTTTGGGGACAGAGTGGTCCGGCTGAGCACCGCCAACACCTACTCCTACCACAAAGTGGACTTGCCCTTCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000562111.1
ENST00000562824.5
ENST00000563088.5
ENST00000565302.5
ENST00000566199.1
ENST00000567120.5
ENST00000567901.1
ENST00000568689.5
ENST00000569396.5
ENST00000569441.5
ENST00000570037.5
ENST00000609261.6
CDS GCA 90 bp AGGAAGGTGGAGATGAAGACGCTGGTGTCAAGGTTGAGCGTAGCATaGCACCAGCGGTCGGGGAAGTACAGCACCAGCCCGGATGGTACA +
Preference number: 5 (lower is better)
Translates to: RKVEMKTLVSRLSVA*HQRSGKYSTSPDGT
Trigger: TGTACCATCCGGGCTGGTGCTGTACTTCCCCGACCGCTGGTGGCATGCTACGCTCAACCTTGACACCAGCGTCTTCATCTCCACCTTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568689.5
CDS CCA 90 bp TGCGATTCCAAAGCTGTAAGCTGGAGCGGTTCCCAGCAGGCCAAATaGGGGTGGGGAGTAGTGCCGAAAGAGAGAGGCCCACTCGGTGAA +
Preference number: 5 (lower is better)
Translates to: CDSKAVSWSGSQQAK*GWGVVPKERGPLGE
Trigger: TTCACCGAGTGGGCCTCTCTCTTTCGGCACTACTCCCCACCCCCATTTGGCCTGCTGGGAACCGCTCCAGCTTACAGCTTTGGAATCGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000562111.1
ENST00000562824.5
ENST00000563088.5
ENST00000564436.5
ENST00000565258.1
ENST00000565302.5
ENST00000567120.5
ENST00000568689.5
ENST00000569396.5
ENST00000569441.5
ENST00000570037.5
ENST00000609261.6
CDS CCA 90 bp AGGTGGGACGTGCTGGTGTGTGACCGGCAGTCCTGCCAGCTGTTTTaGCTAGCCGAGGAAGGTGGAGATGAAGACGCTGGTGTCAAGGTT +
Preference number: 5 (lower is better)
Translates to: RWDVLVCDRQSCQLF*LAEEGGDEDAGVKV
Trigger: AACCTTGACACCAGCGTCTTCATCTCCACCTTCCTCGGCTAGCCAAAACAGCTGGCAGGACTGCCGGTCACACACCAGCACGTCCCACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000562111.1
ENST00000562824.5
ENST00000563088.5
ENST00000564436.5
ENST00000565302.5
ENST00000567120.5
ENST00000568313.1
ENST00000568689.5
ENST00000569441.5
ENST00000570037.5
ENST00000609261.6
CDS-3UTR CAA 90 bp TGTTGGACTCTGGACTGTTTCCCCTCTCAGCATCGCTTTTGCTGGGCCGTGATCGCCAGCGTGGTCTTGTaGGGGTGGAACTCTGGCGTC +
Preference number: 5 (lower is better)
Translates to: CWTLDCFPSQHRFCWAVIASVVL*GWNSGV
Trigger: GACGCCAGAGTTCCACCCCAACAAGACCACGCTGGC...GATCACGGCCCAGCAAAAGCGATGCTGAGAGGGGAAACAGTCCAGAGTCCAACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000562824.5
ENST00000609261.6
CDS-3UTR CAA 90 bp TGTTGGACTCTGGACTGTTTCCCCTCTCAGCATCGCTTTTGCTGGGCCGTGATCCAGGCCAGCGTGGTCTaGTTGGGGTGGAACTCTGGC +
Preference number: 5 (lower is better)
Translates to: CWTLDCFPSQHRFCWAVIQASVV*LGWNSG
Trigger: GCCAGAGTTCCACCCCAACAAGACCACGCTGGCCTG...GATCACGGCCCAGCAAAAGCGATGCTGAGAGGGGAAACAGTCCAGAGTCCAACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000562824.5
ENST00000609261.6
CDS-3UTR CAA 90 bp TGGACTCTGGACTGTTTCCCCTCTCAGCATCGCTTTTGCTGGGCCGTGATCGTCGTCCTGCCAGCTGTTTaGGCTAGCCGAGGAAGGTGG +
Preference number: 5 (lower is better)
Translates to: WTLDCFPSQHRFCWAVIVVLPAV*ASRGRW
Trigger: CCACCTTCCTCGGCTAGCCAAAACAGCTGGCAGGAC...GACGATCACGGCCCAGCAAAAGCGATGCTGAGAGGGGAAACAGTCCAGAGTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562824.5
ENST00000609261.6
CDS-3UTR CAA 90 bp ATCTGTGTAATAAAATCCGTGAGCACGAGGTGGGACGTGCTGGTGTGTGACCGGGCCCGGAACCTCGAGTaGTCCGTGAGTCCCTGCAGG +
Preference number: 5 (lower is better)
Translates to: ICVIKSVSTRWDVLVCDRARNLE*SVSPCR
Trigger: CCTGCAGGGACTCACGGACAACTCGAGGTTCCGGGC...CCGGTCACACACCAGCACGTCCCACCTCGTGCTCACGGATTTTATTACACAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562111.1
ENST00000562824.5
ENST00000609261.6
CDS TCA 90 bp CTGTGTAATAAAATCCGTGAGCACGAGGTGGGACGTGCTGGTGTGTaGCCGGCAGTCCTGCCAGCTGTTTTGGCTAGCCGAGGAAGGTGG +
Preference number: 5 (lower is better)
Translates to: LCNKIREHEVGRAGV*PAVLPAVLASRGRW
Trigger: CCACCTTCCTCGGCTAGCCAAAACAGCTGGCAGGACTGCCGGTCACACACCAGCACGTCCCACCTCGTGCTCACGGATTTTATTACACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000562111.1
ENST00000562824.5
ENST00000563088.5
ENST00000564436.5
ENST00000565302.5
ENST00000567120.5
ENST00000568313.1
ENST00000568689.5
ENST00000569441.5
ENST00000570037.5
ENST00000609261.6
CDS CCA 90 bp TCCAAAGCTGTAAGCTGGAGCGGTTCCCAGCAGGCCAAATGGGGGTaGGGAGTAGTGCCGAAAGAGAGAGGCCCACTCGGTGAAGTTGTT +
Preference number: 5 (lower is better)
Translates to: SKAVSWSGSQQAKWG*GVVPKERGPLGEVV
Trigger: AACAACTTCACCGAGTGGGCCTCTCTCTTTCGGCACTACTCCCCACCCCCATTTGGCCTGCTGGGAACCGCTCCAGCTTACAGCTTTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000562111.1
ENST00000562824.5
ENST00000563088.5
ENST00000564436.5
ENST00000565258.1
ENST00000565302.5
ENST00000567120.5
ENST00000568689.5
ENST00000569396.5
ENST00000569441.5
ENST00000570037.5
ENST00000609261.6
CDS-3UTR CAA 90 bp ATCTGTGTAATAAAATCCGTGAGCACGAGGTGGGACGTGCTGGTGTGTGACCGGCAGGCCAGCGTGGTCTaGTTGGGGTGGAACTCTGGC +
Preference number: 5 (lower is better)
Translates to: ICVIKSVSTRWDVLVCDRQASVV*LGWNSG
Trigger: GCCAGAGTTCCACCCCAACAAGACCACGCTGGCCTG...CCGGTCACACACCAGCACGTCCCACCTCGTGCTCACGGATTTTATTACACAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562824.5
ENST00000609261.6
CDS-3UTR CAA 90 bp TGGACTCTGGACTGTTTCCCCTCTCAGCATCGCTTTTGCTGGGCCGTGATCGTCACGCTGGTGTCAAGGTaGAGCGTAGCATGCCACCAG +
Preference number: 5 (lower is better)
Translates to: WTLDCFPSQHRFCWAVIVTLVSR*SVACHQ
Trigger: CTGGTGGCATGCTACGCTCAACCTTGACACCAGCGT...GACGATCACGGCCCAGCAAAAGCGATGCTGAGAGGGGAAACAGTCCAGAGTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562824.5
ENST00000609261.6
CDS-3UTR CAA 90 bp TGTTGGACTCTGGACTGTTTCCCCTCTCAGCATCGCTTTTGCTGGGCCGTGATCCTCTCAGCATCGCTTTaGCTGGGCCGTGATCGTCCC +
Preference number: 5 (lower is better)
Translates to: CWTLDCFPSQHRFCWAVILSASL*LGRDRP
Trigger: GGGACGATCACGGCCCAGCAAAAGCGATGCTGAGAG...GATCACGGCCCAGCAAAAGCGATGCTGAGAGGGGAAACAGTCCAGAGTCCAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562824.5
ENST00000609261.6
CDS-3UTR CAA 90 bp ATCTGTGTAATAAAATCCGTGAGCACGAGGTGGGACGTGCTGGTGTGTGACCGGGTCCTGCCAGCTGTTTaGGCTAGCCGAGGAAGGTGG +
Preference number: 5 (lower is better)
Translates to: ICVIKSVSTRWDVLVCDRVLPAV*ASRGRW
Trigger: CCACCTTCCTCGGCTAGCCAAAACAGCTGGCAGGAC...CCGGTCACACACCAGCACGTCCCACCTCGTGCTCACGGATTTTATTACACAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562111.1
ENST00000562824.5
ENST00000609261.6
CDS-3UTR CAA 90 bp AGGTGGGGTGTCTCCCCCAAGCACAGCACTCAACTCTTCACAGGACAAGTACATCTCTCAGCATCGCTTTaGCTGGGCCGTGATCGTCCC +
Preference number: 5 (lower is better)
Translates to: RWGVSPKHSTQLFTGQVHLSASL*LGRDRP
Trigger: GGGACGATCACGGCCCAGCAAAAGCGATGCTGAGAG...ATGTACTTGTCCTGTGAAGAGTTGAGTGCTGTGCTTGGGGGAGACACCCCACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609261.6
CDS-3UTR CAA 90 bp AAGGTGGAGATGAAGACGCTGGTGTCAAGGTTGAGCGTAGCATGCCACCAGCGGCACTCGGTGAAGTTGTaGTCCCCGAAGAAGTACAGG +
Preference number: 5 (lower is better)
Translates to: KVEMKTLVSRLSVACHQRHSVKL*SPKKYR
Trigger: CCTGTACTTCTTCGGGGACAACAACTTCACCGAGTG...CCGCTGGTGGCATGCTACGCTCAACCTTGACACCAGCGTCTTCATCTCCACCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565258.1
CDS-3UTR CAA 90 bp ATCTGTGTAATAAAATCCGTGAGCACGAGGTGGGACGTGCTGGTGTGTGACCGGACGCTGGTGTCAAGGTaGAGCGTAGCATGCCACCAG +
Preference number: 5 (lower is better)
Translates to: ICVIKSVSTRWDVLVCDRTLVSR*SVACHQ
Trigger: CTGGTGGCATGCTACGCTCAACCTTGACACCAGCGT...CCGGTCACACACCAGCACGTCCCACCTCGTGCTCACGGATTTTATTACACAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562111.1
ENST00000562824.5
ENST00000609261.6
CDS-3UTR CAA 90 bp ATCTGTGTAATAAAATCCGTGAGCACGAGGTGGGACGTGCTGGTGTGTGACCGGGCCCACTCGGTGAAGTaGTTGTCCCCGAAGAAGTAC +
Preference number: 5 (lower is better)
Translates to: ICVIKSVSTRWDVLVCDRAHSVK*LSPKKY
Trigger: GTACTTCTTCGGGGACAACAACTTCACCGAGTGGGC...CCGGTCACACACCAGCACGTCCCACCTCGTGCTCACGGATTTTATTACACAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000562111.1
ENST00000562824.5
ENST00000609261.6
CDS-3UTR CAA 90 bp CAGCTGTTTTGGCTAGCCGAGGAAGGTGGAGATGAAGACGCTGGTGTCAAGGTTGCCCACTCGGTGAAGTaGTTGTCCCCGAAGAAGTAC +
Preference number: 5 (lower is better)
Translates to: QLFWLAEEGGDEDAGVKVAHSVK*LSPKKY
Trigger: GTACTTCTTCGGGGACAACAACTTCACCGAGTGGGC...AACCTTGACACCAGCGTCTTCATCTCCACCTTCCTCGGCTAGCCAAAACAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565258.1
CDS-3UTR CAA 90 bp ATCTGTGTAATAAAATCCGTGAGCACGAGGTGGGACGTGCTGGTGTGTGACCGGCACTCGGTGAAGTTGTaGTCCCCGAAGAAGTACAGG +
Preference number: 5 (lower is better)
Translates to: ICVIKSVSTRWDVLVCDRHSVKL*SPKKYR
Trigger: CCTGTACTTCTTCGGGGACAACAACTTCACCGAGTG...CCGGTCACACACCAGCACGTCCCACCTCGTGCTCACGGATTTTATTACACAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000562111.1
ENST00000562824.5
ENST00000609261.6
CDS-3UTR CAA 90 bp ATCTGTGTAATAAAATCCGTGAGCACGAGGTGGGACGTGCTGGTGTGTGACCGGATGTTAGCTCTGAGATaGGGGTGTGGTCAGACATCT +
Preference number: 5 (lower is better)
Translates to: ICVIKSVSTRWDVLVCDRMLALR*GCGQTS
Trigger: AGATGTCTGACCACACCCCAATCTCAGAGCTAACAT...CCGGTCACACACCAGCACGTCCCACCTCGTGCTCACGGATTTTATTACACAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609261.6
CDS TCA 72 bp GCGCCCAGAGCGCGAGCAACCGCGACGCCGGCGCCATaGGCCTGCCGCCCTCAGGCAGCCGCGCTGCACGCC +
Preference number: 6 (lower is better)
Translates to: APRARATATPAP*ACRPQAAALHA
Trigger: GGCGTGCAGCGCGGCTGCCTGAGGGCGGCAGGCTCATGGCGCCGGCGTCGCGGTTGCTCGCGCTCTGGGCGC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562824.5
ENST00000567120.5
CDS TCA 72 bp GAAGGCGGCCTTGGGCGGTCGGGGCAGACGGGCCGGTaGACAGGACGCGACCTCCGCGATCAGGGGCGCACG +
Preference number: 6 (lower is better)
Translates to: EGGLGRSGQTGR*TGRDLRDQGRT
Trigger: CGTGCGCCCCTGATCGCGGAGGTCGCGTCCTGTTCACCGGCCCGTCTGCCCCGACCGCCCAAGGCCGCCTTC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000563088.5
ENST00000566199.1
ENST00000567901.1
ENST00000569396.5
ENST00000569441.5
CDS CAA 72 bp GCCGCCCTCAGGCAGCCGCGCTGCACGCCGGGAACCTaGGGCCCATCCGCCAGCCATTGGCCGGCAGCTTCG +
Preference number: 6 (lower is better)
Translates to: AALRQPRCTPGT*GPSASHWPAAS
Trigger: CGAAGCTGCCGGCCAATGGCTGGCGGATGGGCCCAAGGTTCCCGGCGTGCAGCGCGGCTGCCTGAGGGCGGC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567120.5
CDS CCA 72 bp TTGGCCCGCCCCGGAAGAGGCCTCTACGGGAGGCACTaGGAAGGCCGCCCCGAGAGCGACTATGGGCGCCGC +
Preference number: 6 (lower is better)
Translates to: LARPGRGLYGRH*EGRPESDYGRR
Trigger: GCGGCGCCCATAGTCGCTCTCGGGGCGGCCTTCCCAGTGCCTCCCGTAGAGGCCTCTTCCGGGGCGGGCCAA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567120.5
CDS CCA 72 bp CCGCCCTCAGGCAGCCGCGCTGCACGCCGGGAACCTTaGGCCCATCCGCCAGCCATTGGCCGGCAGCTTCGT +
Preference number: 6 (lower is better)
Translates to: PPSGSRAARREP*AHPPAIGRQLR
Trigger: ACGAAGCTGCCGGCCAATGGCTGGCGGATGGGCCCAAGGTTCCCGGCGTGCAGCGCGGCTGCCTGAGGGCGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567120.5
CDS CAA 90 bp GCAGCCGCGCTGCACGCCGGGAACCTTGGGCCCATCCGCCAGCCATaGGCCGGCAGCTTCGTCGTCGTGGCAACGGCCGGGAACCGGGAC +
Preference number: 6 (lower is better)
Translates to: AAALHAGNLGPIRQP*AGSFVVVATAGNRD
Trigger: GTCCCGGTTCCCGGCCGTTGCCACGACGACGAAGCTGCCGGCCAATGGCTGGCGGATGGGCCCAAGGTTCCCGGCGTGCAGCGCGGCTGC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567120.5
CDS CAA 90 bp CATGAGCCTGCCGCCCTCAGGCAGCCGCGCTGCACGCCGGGAACCTaGGGCCCATCCGCCAGCCATTGGCCGGCAGCTTCGTCGTCGTGG +
Preference number: 6 (lower is better)
Translates to: HEPAALRQPRCTPGT*GPSASHWPAASSSW
Trigger: CCACGACGACGAAGCTGCCGGCCAATGGCTGGCGGATGGGCCCAAGGTTCCCGGCGTGCAGCGCGGCTGCCTGAGGGCGGCAGGCTCATG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567120.5
CDS CAA 72 bp CTGCACGCCGGGAACCTTGGGCCCATCCGCCAGCCATaGGCCGGCAGCTTCGTCGTCGTGGCAACGGCCGGG +
Preference number: 6 (lower is better)
Translates to: LHAGNLGPIRQP*AGSFVVVATAG
Trigger: CCCGGCCGTTGCCACGACGACGAAGCTGCCGGCCAATGGCTGGCGGATGGGCCCAAGGTTCCCGGCGTGCAG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567120.5
CDS TCA 72 bp GTGGCAACGGCCGGGAACCGGGACGGACCCCGGAAGTaGCCTCCTTTGGCCCGCCCCGGAAGAGGCCTCTAC +
Preference number: 6 (lower is better)
Translates to: VATAGNRDGPRK*PPLARPGRGLY
Trigger: GTAGAGGCCTCTTCCGGGGCGGGCCAAAGGAGGTCACTTCCGGGGTCCGTCCCGGTTCCCGGCCGTTGCCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567120.5
CDS CCA 72 bp CCGGGAACCGGGACGGACCCCGGAAGTGACCTCCTTTaGCCCGCCCCGGAAGAGGCCTCTACGGGAGGCACT +
Preference number: 6 (lower is better)
Translates to: PGTGTDPGSDLL*PAPEEASTGGT
Trigger: AGTGCCTCCCGTAGAGGCCTCTTCCGGGGCGGGCCAAAGGAGGTCACTTCCGGGGTCCGTCCCGGTTCCCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567120.5
CDS CCA 72 bp CCATCCGCCAGCCATTGGCCGGCAGCTTCGTCGTCGTaGCAACGGCCGGGAACCGGGACGGACCCCGGAAGT +
Preference number: 6 (lower is better)
Translates to: PSASHWPAASSS*QRPGTGTDPGS
Trigger: ACTTCCGGGGTCCGTCCCGGTTCCCGGCCGTTGCCACGACGACGAAGCTGCCGGCCAATGGCTGGCGGATGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567120.5
CDS CCA 72 bp TGCACGCCGGGAACCTTGGGCCCATCCGCCAGCCATTaGCCGGCAGCTTCGTCGTCGTGGCAACGGCCGGGA +
Preference number: 6 (lower is better)
Translates to: CTPGTLGPSASH*PAASSSWQRPG
Trigger: TCCCGGCCGTTGCCACGACGACGAAGCTGCCGGCCAATGGCTGGCGGATGGGCCCAAGGTTCCCGGCGTGCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567120.5
CDS CAA 72 bp GAGTGGCCGGGGACGGACGGGCACGCGCTCACCGAGTaGTCCGTGAGTCCCTGCAGGATGACGGGCCTGACG +
Preference number: 6 (lower is better)
Translates to: EWPGTDGHALTE*SVSPCRMTGLT
Trigger: CGTCAGGCCCGTCATCCTGCAGGGACTCACGGACAACTCGGTGAGCGCGTGCCCGTCCGTCCCCGGCCACTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000565302.5
ENST00000567901.1
ENST00000570037.5
CDS CAA 90 bp CACGGGCGAGAGTGGCCGGGGACGGACGGGCACGCGCTCACCGAGTaGTCCGTGAGTCCCTGCAGGATGACGGGCCTGACGAAGGCGTAC +
Preference number: 6 (lower is better)
Translates to: HGREWPGTDGHALTE*SVSPCRMTGLTKAY
Trigger: GTACGCCTTCGTCAGGCCCGTCATCCTGCAGGGACTCACGGACAACTCGGTGAGCGCGTGCCCGTCCGTCCCCGGCCACTCTCGCCCGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000565302.5
ENST00000567901.1
ENST00000570037.5
CDS TCA 72 bp AGGGGCGCACGTACTGCTGCACGAACTCCGCGTAGGTaGGGTCGGCCCGACGCTCCACCGTGCAGCGCTCCT +
Preference number: 6 (lower is better)
Translates to: RGARTAARTPRR*GRPDAPPCSAP
Trigger: AGGAGCGCTGCACGGTGGAGCGTCGGGCCGACCTCACCTACGCGGAGTTCGTGCAGCAGTACGTGCGCCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000563088.5
ENST00000566199.1
ENST00000567901.1
ENST00000569396.5
ENST00000569441.5
CDS GCA 72 bp GACGGGCACGCGCTCACCGAGTTGTCCGTGAGTCCCTaGAGGATGACGGGCCTGACGAAGGCGTACCACCCG +
Preference number: 6 (lower is better)
Translates to: DGHALTELSVSP*RMTGLTKAYHP
Trigger: CGGGTGGTACGCCTTCGTCAGGCCCGTCATCCTGCAGGGACTCACGGACAACTCGGTGAGCGCGTGCCCGTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565302.5
CDS GCA 72 bp GACCTCACCAGCCCGGATGGTACACTCCAGGGGCCGTaGAGACGGTGGCAGGGCTGGGTATGTGTCCCGGAG +
Preference number: 6 (lower is better)
Translates to: DLTSPDGTLQGP*RRWQGWVCVPE
Trigger: CTCCGGGACACATACCCAGCCCTGCCACCGTCTGCACGGCCCCTGGAGTGTACCATCCGGGCTGGTGAGGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565302.5
CDS GCA 72 bp CACAGGGCCCGGAACCTCGAGTTGTCCGTGAGTCCCTaGAGGATGACGGGCCTGACGAAGGCGTACCACCCG +
Preference number: 6 (lower is better)
Translates to: HRARNLELSVSP*RMTGLTKAYHP
Trigger: CGGGTGGTACGCCTTCGTCAGGCCCGTCATCCTGCAGGGACTCACGGACAACTCGAGGTTCCGGGCCCTGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562824.5
CDS GCA 72 bp TACAGCACCAGCCCGGATGGTACACTCCAGGGGCCGTaGAGACGGTGGCAGGGCTGGGTATGTGTCCCGGAG +
Preference number: 6 (lower is better)
Translates to: YSTSPDGTLQGP*RRWQGWVCVPE
Trigger: CTCCGGGACACATACCCAGCCCTGCCACCGTCTGCACGGCCCCTGGAGTGTACCATCCGGGCTGGTGCTGTA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568689.5
CDS GCA 72 bp GACGGGCACGCGCTCACCGAGTTGTCCGTGAGTCCCTaGAGGATGACGGGCCTGACGAAGGCGTACTGCTGC +
Preference number: 6 (lower is better)
Translates to: DGHALTELSVSP*RMTGLTKAYCC
Trigger: GCAGCAGTACGCCTTCGTCAGGCCCGTCATCCTGCAGGGACTCACGGACAACTCGGTGAGCGCGTGCCCGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570037.5
CDS GCA 72 bp CACAGGGCCCGGAACCTCGAGTTGTCCGTGAGTCCCTaGAGGATGACGGGCCTGACGAAGGCGTACTGCTGC +
Preference number: 6 (lower is better)
Translates to: HRARNLELSVSP*RMTGLTKAYCC
Trigger: GCAGCAGTACGCCTTCGTCAGGCCCGTCATCCTGCAGGGACTCACGGACAACTCGAGGTTCCGGGCCCTGTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000562111.1
ENST00000567120.5
ENST00000568689.5
ENST00000609261.6
CDS GCA 72 bp GACGGGCACGCGCTCACCGAGTTGTCCGTGAGTCCCTaGAGGATGACGGGCCTGACGAAGGCGTACCTGGAA +
Preference number: 6 (lower is better)
Translates to: DGHALTELSVSP*RMTGLTKAYLE
Trigger: TTCCAGGTACGCCTTCGTCAGGCCCGTCATCCTGCAGGGACTCACGGACAACTCGGTGAGCGCGTGCCCGTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567901.1
CDS GCA 72 bp CACAGGGCCCGGAACCTCGAGTTGTCCGTGAGTCCCTaGAGGATGACGGGCCTGACGAAGGCGTACCTGGAA +
Preference number: 6 (lower is better)
Translates to: HRARNLELSVSP*RMTGLTKAYLE
Trigger: TTCCAGGTACGCCTTCGTCAGGCCCGTCATCCTGCAGGGACTCACGGACAACTCGAGGTTCCGGGCCCTGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000566199.1
ENST00000569396.5
ENST00000569441.5
CDS CCA 72 bp GTAAGCTGGAGCGGTTCCCAGCAGGCCAAATGGGGGTaGGGAGTAGTGCCGAAAGAGAGAGGCCCACTCGGT +
Preference number: 6 (lower is better)
Translates to: VSWSGSQQAKWG*GVVPKERGPLG
Trigger: ACCGAGTGGGCCTCTCTCTTTCGGCACTACTCCCCACCCCCATTTGGCCTGCTGGGAACCGCTCCAGCTTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000562111.1
ENST00000562824.5
ENST00000563088.5
ENST00000564436.5
ENST00000565258.1
ENST00000565302.5
ENST00000567120.5
ENST00000568689.5
ENST00000569396.5
ENST00000569441.5
ENST00000570037.5
ENST00000609261.6
CDS CCA 72 bp GTAGCATGCCACCAGCGGTCGGGGAAGTACAGCACCTaGTGGAGGAAGGGGGTGCAGCAGAGATTAGCTGCG +
Preference number: 6 (lower is better)
Translates to: VACHQRSGKYST*WRKGVQQRLAA
Trigger: CGCAGCTAATCTCTGCTGCACCCCCTTCCTCCACCAGGTGCTGTACTTCCCCGACCGCTGGTGGCATGCTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565302.5
CDS GCA 72 bp ACGAGGTGGGACGTGCTGGTGTGTGACCGGCAGTCCTaGCAGCTGTTTTGGCTAGCCGAGGAAGGTGGAGAT +
Preference number: 6 (lower is better)
Translates to: TRWDVLVCDRQS*QLFWLAEEGGD
Trigger: ATCTCCACCTTCCTCGGCTAGCCAAAACAGCTGGCAGGACTGCCGGTCACACACCAGCACGTCCCACCTCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000562111.1
ENST00000562824.5
ENST00000563088.5
ENST00000564436.5
ENST00000565302.5
ENST00000567120.5
ENST00000568313.1
ENST00000568689.5
ENST00000569441.5
ENST00000570037.5
ENST00000609261.6
CDS GCA 72 bp GAGATGAAGACGCTGGTGTCAAGGTTGAGCGTAGCATaGCACCAGCGGTCGGGGAAGTACAGCACCAGCCCG +
Preference number: 6 (lower is better)
Translates to: EMKTLVSRLSVA*HQRSGKYSTSP
Trigger: CGGGCTGGTGCTGTACTTCCCCGACCGCTGGTGGCATGCTACGCTCAACCTTGACACCAGCGTCTTCATCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568689.5
CDS CCA 72 bp GAGCCAGGCCAGCGTGGTCTTGTTGGGGTGGAACTCTaGCGTCTTCTCAGGTGGGTAAAGGAACCAGCGCTG +
Preference number: 6 (lower is better)
Translates to: EPGQRGLVGVEL*RLLRWVKEPAL
Trigger: CAGCGCTGGTTCCTTTACCCACCTGAGAAGACGCCAGAGTTCCACCCCAACAAGACCACGCTGGCCTGGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568313.1
CDS TCA 72 bp AAAATCCGTGAGCACGAGGTGGGACGTGCTGGTGTGTaGCCGGCAGTCCTGCCAGCTGTTTTGGCTAGCCGA +
Preference number: 6 (lower is better)
Translates to: KIREHEVGRAGV*PAVLPAVLASR
Trigger: TCGGCTAGCCAAAACAGCTGGCAGGACTGCCGGTCACACACCAGCACGTCCCACCTCGTGCTCACGGATTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000562111.1
ENST00000562824.5
ENST00000563088.5
ENST00000564436.5
ENST00000565302.5
ENST00000567120.5
ENST00000568313.1
ENST00000568689.5
ENST00000569441.5
ENST00000570037.5
ENST00000609261.6
CDS TCA 72 bp GGGGAAGTACAGCACCTTACGACCGTAGATCACTTCTaGGTACCCGGGTCCATGCCAGTGGAAGGGCACCCC +
Preference number: 6 (lower is better)
Translates to: GEVQHLTTVDHF*VPGSMPVEGHP
Trigger: GGGGTGCCCTTCCACTGGCATGGACCCGGGTACTCAGAAGTGATCTACGGTCGTAAGGTGCTGTACTTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562111.1
ENST00000564436.5
CDS GCA 72 bp GGTGAAGTTGTTGTCCCCGAAGAAGTACAGGGTGTCTaGCAACAGAGACGGCGGGGACAGGGATCCTGGCAC +
Preference number: 6 (lower is better)
Translates to: GEVVVPEEVQGV*QQRRRGQGSWH
Trigger: GTGCCAGGATCCCTGTCCCCGCCGTCTCTGTTGGCAGACACCCTGTACTTCTTCGGGGACAACAACTTCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000564436.5
ENST00000567901.1
ENST00000568689.5
ENST00000569441.5
CDS GCA 72 bp GAGATGAAGACGCTGGTGTCAAGGTTGAGCGTAGCATaGCACCAGCGGTCGGGGAAGTACAGCACCTGGTGG +
Preference number: 6 (lower is better)
Translates to: EMKTLVSRLSVA*HQRSGKYSTWW
Trigger: CCACCAGGTGCTGTACTTCCCCGACCGCTGGTGGCATGCTACGCTCAACCTTGACACCAGCGTCTTCATCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565302.5
CDS CCA 72 bp GGAAGGGCAAGTCCACTTTGTGGTAGGAGTAGGTGTTaGCGGTGCTCAGCCGGACCACTCTGTCCCCAAACG +
Preference number: 6 (lower is better)
Translates to: GRASPLCGRSRC*RCSAGPLCPQT
Trigger: CGTTTGGGGACAGAGTGGTCCGGCTGAGCACCGCCAACACCTACTCCTACCACAAAGTGGACTTGCCCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000562111.1
ENST00000562824.5
ENST00000563088.5
ENST00000565302.5
ENST00000566199.1
ENST00000567120.5
ENST00000567901.1
ENST00000568689.5
ENST00000569396.5
ENST00000569441.5
ENST00000570037.5
ENST00000609261.6
CDS CCA 72 bp AAAGCTGTAAGCTGGAGCGGTTCCCAGCAGGCCAAATaGGGGTGGGGAGTAGTGCCGAAAGAGAGAGGCCCA +
Preference number: 6 (lower is better)
Translates to: KAVSWSGSQQAK*GWGVVPKERGP
Trigger: TGGGCCTCTCTCTTTCGGCACTACTCCCCACCCCCATTTGGCCTGCTGGGAACCGCTCCAGCTTACAGCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000562111.1
ENST00000562824.5
ENST00000563088.5
ENST00000564436.5
ENST00000565258.1
ENST00000565302.5
ENST00000567120.5
ENST00000568689.5
ENST00000569396.5
ENST00000569441.5
ENST00000570037.5
ENST00000609261.6
CDS TCA 72 bp GTAAAGGAACCAGCGCTTACGACCGTAGATCACTTCTaGGTACCCGGGTCCATGCCAGTGGAAGGGCACCCC +
Preference number: 6 (lower is better)
Translates to: VKEPALTTVDHF*VPGSMPVEGHP
Trigger: GGGGTGCCCTTCCACTGGCATGGACCCGGGTACTCAGAAGTGATCTACGGTCGTAAGCGCTGGTTCCTTTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000562824.5
ENST00000563088.5
ENST00000565258.1
ENST00000565302.5
ENST00000567120.5
ENST00000568689.5
ENST00000569441.5
ENST00000570037.5
ENST00000609261.6
CDS GCA 72 bp GCAAGTCCACTTTGTGGTAGGAGTAGGTGTTGGCGGTaGTCAGCCGGACCACTCTGTCCCCAAACGAAGCCA +
Preference number: 6 (lower is better)
Translates to: ASPLCGRSRCWR*SAGPLCPQTKP
Trigger: TGGCTTCGTTTGGGGACAGAGTGGTCCGGCTGAGCACCGCCAACACCTACTCCTACCACAAAGTGGACTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000562111.1
ENST00000562824.5
ENST00000563088.5
ENST00000565302.5
ENST00000566199.1
ENST00000567120.5
ENST00000567901.1
ENST00000568689.5
ENST00000569396.5
ENST00000569441.5
ENST00000570037.5
ENST00000609261.6
CDS TCA 72 bp GTGGGGAGTAGTGCCGAAAGAGAGAGGCCCACTCGGTaGAGTTGTTGTCCCCGAAGAAGTACAGGGTGTCTG +
Preference number: 6 (lower is better)
Translates to: VGSSAERERPTR*SCCPRRSTGCL
Trigger: CAGACACCCTGTACTTCTTCGGGGACAACAACTTCACCGAGTGGGCCTCTCTCTTTCGGCACTACTCCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000564436.5
ENST00000567901.1
ENST00000568689.5
ENST00000569441.5
CDS GCA 72 bp GAGATGAAGACGCTGGTGTCAAGGTTGAGCGTAGCATaGCACCAGCGGTCGGGGAAGTACAGCACCTTACGA +
Preference number: 6 (lower is better)
Translates to: EMKTLVSRLSVA*HQRSGKYSTLR
Trigger: TCGTAAGGTGCTGTACTTCCCCGACCGCTGGTGGCATGCTACGCTCAACCTTGACACCAGCGTCTTCATCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562111.1
ENST00000564436.5
CDS TCA 72 bp GTGGGGAGTAGTGCCGAAAGAGAGAGGCCCACTCGGTaGAGTTGTTGTCCCCGAAGAAGTACAGGGTGTCAT +
Preference number: 6 (lower is better)
Translates to: VGSSAERERPTR*SCCPRRSTGCH
Trigger: ATGACACCCTGTACTTCTTCGGGGACAACAACTTCACCGAGTGGGCCTCTCTCTTTCGGCACTACTCCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000562111.1
ENST00000562824.5
ENST00000563088.5
ENST00000565258.1
ENST00000565302.5
ENST00000566199.1
ENST00000567120.5
ENST00000569396.5
ENST00000570037.5
ENST00000609261.6