RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for JMJD4 (Homo sapiens)

Ensembl gene IDs: ENSG00000081692

Ensembl transcript IDs: ENST00000438896.3, ENST00000465251.1, ENST00000480590.1, ENST00000485807.1, ENST00000620518.5

Found 314 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCAGGCAGTGGCCATGAACAGCCAGGCCACAAGCCTCGACAGGGGTaGGCCCCAGGTCACAGGGAGGGCGGTCTTTATTTCTGGAAGGGC +
Preference number: 1 (lower is better)
Translates to: PGSGHEQPGHKPRQG*APGHREGGLYFWKG
Trigger: GCCCTTCCAGAAATAAAGACCGCCCTCCCTGTGACCTGGGGCCCACCCCTGTCGAGGCTTGTGGCCTGGCTGTTCATGGCCACTGCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
3UTR CCA 90 bp CAGAGAAGGCACACCAGACACAGACTCCTGTCAGCTCAGGCGTCCTaGCCTAAGGAGGCAGGGCCCCCAAAAGAGCCAGGTCCTGGCACC +
Preference number: 1 (lower is better)
Translates to: QRRHTRHRLLSAQAS*PKEAGPPKEPGPGT
Trigger: GGTGCCAGGACCTGGCTCTTTTGGGGGCCCTGCCTCCTTAGGCCAGGACGCCTGAGCTGACAGGAGTCTGTGTCTGGTGTGCCTTCTCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
3UTR TCA 90 bp CAGGCCTGCTGCAGGTCAGAAGGGCCACATCCCATCTTGGGTCCCTaGCCTCATTGGGCCTCACCTGAAAACAGGCACCCAGGCAGTGGC +
Preference number: 1 (lower is better)
Translates to: QACCRSEGPHPILGP*PHWASPENRHPGSG
Trigger: GCCACTGCCTGGGTGCCTGTTTTCAGGTGAGGCCCAATGAGGTCAGGGACCCAAGATGGGATGTGGCCCTTCTGACCTGCAGCAGGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
3UTR CCA 90 bp GCTCCCAGCAGGCCTGCTGCAGGTCAGAAGGGCCACATCCCATCTTaGGTCCCTGACCTCATTGGGCCTCACCTGAAAACAGGCACCCAG +
Preference number: 1 (lower is better)
Translates to: APSRPAAGQKGHIPS*VPDLIGPHLKTGTQ
Trigger: CTGGGTGCCTGTTTTCAGGTGAGGCCCAATGAGGTCAGGGACCCAAGATGGGATGTGGCCCTTCTGACCTGCAGCAGGCCTGCTGGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
3UTR CCA 90 bp GCAGAGCCAGGGGTGGTCCAATGGCCTGAGACGAGGGGACAGGGCTaGCCTATTAAGAGGAGCCACCAGAGAAGGCACACCAGACACAGA +
Preference number: 1 (lower is better)
Translates to: AEPGVVQWPETRGQG*PIKRSHQRRHTRHR
Trigger: TCTGTGTCTGGTGTGCCTTCTCTGGTGGCTCCTCTTAATAGGCCAGCCCTGTCCCCTCGTCTCAGGCCATTGGACCACCCCTGGCTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
3UTR-3UTR GCA 90 bp GCTGCTCACTGCTGTGCCTTGATCGGCCTGGACGAGCCCGCCCACACCTCCATCGGCCAACCCCAGCCCTaGCTGGAGGCCCTGGTGAGC +
Preference number: 2 (lower is better)
Translates to: AAHCCALIGLDEPAHTSIGQPQP*LEALVS
Trigger: GCTCACCAGGGCCTCCAGGCAGGGCTGGGGTTGGCC...GATGGAGGTGTGGGCGGGCTCGTCCAGGCCGATCAAGGCACAGCAGTGAGCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
3UTR-3UTR GCA 90 bp GGCCGCTGGTTCCACAGCCCATCACCTGGAGGTGATGGAGGCCAACCCCAGCCCAGCTCCCAGCAGGCCTaGTGCAGGTCAGAAGGGCCA +
Preference number: 2 (lower is better)
Translates to: GRWFHSPSPGGDGGQPQPSSQQA*CRSEGP
Trigger: TGGCCCTTCTGACCTGCAGCAGGCCTGCTGGGAGCT...GGGCTGGGGTTGGCCTCCATCACCTCCAGGTGATGGGCTGTGGAACCAGCGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
3UTR-3UTR TCA 90 bp CCTGGGGCATCCTCTGCAAGAGGATCCCACGAGAGTCCATTCCCCACCACAGGCCCCATCACCTGGAGGTaGTGGAGGCCAACCCCAGCC +
Preference number: 2 (lower is better)
Translates to: PGASSARGSHESPFPTTGPITWR*WRPTPA
Trigger: GGCTGGGGTTGGCCTCCATCACCTCCAGGTGATGGG...GCCTGTGGTGGGGAATGGACTCTCGTGGGATCCTCTTGCAGAGGATGCCCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
3UTR-3UTR TCA 90 bp GCTGCTCACTGCTGTGCCTTGATCGGCCTGGACGAGCCCGCCCACACCTCCATCGGGAAGACCCAGCTGTaGGTGCACAGCAGGCACAGT +
Preference number: 2 (lower is better)
Translates to: AAHCCALIGLDEPAHTSIGKTQL*VHSRHS
Trigger: ACTGTGCCTGCTGTGCACTCACAGCTGGGTCTTCCC...GATGGAGGTGTGGGCGGGCTCGTCCAGGCCGATCAAGGCACAGCAGTGAGCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
3UTR-3UTR CCA 90 bp GGCCGCTGGTTCCACAGCCCATCACCTGGAGGTGATGGAGGCCAACCCCAGCCCGGCCACATCCCATCTTaGGTCCCTGACCTCATTGGG +
Preference number: 2 (lower is better)
Translates to: GRWFHSPSPGGDGGQPQPGHIPS*VPDLIG
Trigger: CCCAATGAGGTCAGGGACCCAAGATGGGATGTGGCC...GGGCTGGGGTTGGCCTCCATCACCTCCAGGTGATGGGCTGTGGAACCAGCGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
3UTR-3UTR CCA 90 bp GCTGCTCACTGCTGTGCCTTGATCGGCCTGGACGAGCCCGCCCACACCTCCATCAGTGTGAAGAGGGGCTaGGGACCCACCACTCCTGAG +
Preference number: 2 (lower is better)
Translates to: AAHCCALIGLDEPAHTSISVKRG*GPTTPE
Trigger: CTCAGGAGTGGTGGGTCCCCAGCCCCTCTTCACACT...GATGGAGGTGTGGGCGGGCTCGTCCAGGCCGATCAAGGCACAGCAGTGAGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
3UTR-3UTR TCA 90 bp GCTGCTCACTGCTGTGCCTTGATCGGCCTGGACGAGCCCGCCCACACCTCCATCTCATTGGGCCTCACCTaGAAACAGGCACCCAGGCAG +
Preference number: 2 (lower is better)
Translates to: AAHCCALIGLDEPAHTSISLGLT*KQAPRQ
Trigger: CTGCCTGGGTGCCTGTTTTCAGGTGAGGCCCAATGA...GATGGAGGTGTGGGCGGGCTCGTCCAGGCCGATCAAGGCACAGCAGTGAGCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
3UTR-3UTR TCA 90 bp TTGATCGGCCTGGACGAGCCCGCCCACACCTCCATCATACCCAGTGTGAAGAGGCCCATCACCTGGAGGTaGTGGAGGCCAACCCCAGCC +
Preference number: 2 (lower is better)
Translates to: LIGLDEPAHTSIIPSVKRPITWR*WRPTPA
Trigger: GGCTGGGGTTGGCCTCCATCACCTCCAGGTGATGGG...CCTCTTCACACTGGGTATGATGGAGGTGTGGGCGGGCTCGTCCAGGCCGATCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
3UTR-3UTR TCA 90 bp CTAGACAAGTGCCAGCGGCCCCAGTTGATGCCACGGGCAGGCAATGTGCATAGCCTCACTGCTGTGCCTTaGTCGGCCTGGACGAGCCCG +
Preference number: 2 (lower is better)
Translates to: LDKCQRPQLMPRAGNVHSLTAVP*SAWTSP
Trigger: CGGGCTCGTCCAGGCCGATCAAGGCACAGCAGTGAG...GCTATGCACATTGCCTGCCCGTGGCATCAACTGGGGCCGCTGGCACTTGTCTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
3UTR-3UTR GCA 90 bp CATCCTAGACAAGTGCCAGCGGCCCCAGTTGATGCCACGGGCAGGCAATGTGCACCCGGAGCAGGAGGCTaGCTCTCTTCCACCCGTCCT +
Preference number: 2 (lower is better)
Translates to: HPRQVPAAPVDATGRQCAPGAGG*LSSTRP
Trigger: AGGACGGGTGGAAGAGAGGCAGCCTCCTGCTCCGGG...TGCACATTGCCTGCCCGTGGCATCAACTGGGGCCGCTGGCACTTGTCTAGGATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
3UTR-3UTR CCA 90 bp CTAGACAAGTGCCAGCGGCCCCAGTTGATGCCACGGGCAGGCAATGTGCATAGCAAGCCTCGACAGGGGTaGGCCCCAGGTCACAGGGAG +
Preference number: 2 (lower is better)
Translates to: LDKCQRPQLMPRAGNVHSKPRQG*APGHRE
Trigger: CTCCCTGTGACCTGGGGCCCACCCCTGTCGAGGCTT...GCTATGCACATTGCCTGCCCGTGGCATCAACTGGGGCCGCTGGCACTTGTCTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
3UTR-3UTR CCA 90 bp CTCAGGCGTCCTGGCCTAAGGAGGCAGGGCCCCCAAAAGAGCCAGGTCCTGGCAGGCCACATCCCATCTTaGGTCCCTGACCTCATTGGG +
Preference number: 2 (lower is better)
Translates to: LRRPGLRRQGPQKSQVLAGHIPS*VPDLIG
Trigger: CCCAATGAGGTCAGGGACCCAAGATGGGATGTGGCC...TGCCAGGACCTGGCTCTTTTGGGGGCCCTGCCTCCTTAGGCCAGGACGCCTGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
3UTR-3UTR CCA 90 bp ACAGAAACCCCTGCCCTTCTTGGGGGCTTCCATCCTAGACAAGTGCCAGCGGCCTCAGCTCAGGCGTCCTaGCCTAAGGAGGCAGGGCCC +
Preference number: 2 (lower is better)
Translates to: TETPALLGGFHPRQVPAASAQAS*PKEAGP
Trigger: GGGCCCTGCCTCCTTAGGCCAGGACGCCTGAGCTGA...GGCCGCTGGCACTTGTCTAGGATGGAAGCCCCCAAGAAGGGCAGGGGTTTCTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
3UTR-3UTR CCA 90 bp AGCCAGGGGTGGTCCAATGGCCTGAGACGAGGGGACAGGGCTGGCCTATTAAGATCAGCTCAGGCGTCCTaGCCTAAGGAGGCAGGGCCC +
Preference number: 2 (lower is better)
Translates to: SQGWSNGLRRGDRAGLLRSAQAS*PKEAGP
Trigger: GGGCCCTGCCTCCTTAGGCCAGGACGCCTGAGCTGA...TCTTAATAGGCCAGCCCTGTCCCCTCGTCTCAGGCCATTGGACCACCCCTGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
3UTR-3UTR CCA 90 bp GCTGCTCACTGCTGTGCCTTGATCGGCCTGGACGAGCCCGCCCACACCTCCATCACGAGGGGACAGGGCTaGCCTATTAAGAGGAGCCAC +
Preference number: 2 (lower is better)
Translates to: AAHCCALIGLDEPAHTSITRGQG*PIKRSH
Trigger: GTGGCTCCTCTTAATAGGCCAGCCCTGTCCCCTCGT...GATGGAGGTGTGGGCGGGCTCGTCCAGGCCGATCAAGGCACAGCAGTGAGCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
3UTR CAA 90 bp CCCTTCTTGGGGGCTTCCATCCTAGACAAGTGCCAGCGGCCCCAGTaGATGCCACGGGCAGGCAATGTGCATAGCCATGGCACGTGCCGT +
Preference number: 2 (lower is better)
Translates to: PFLGASILDKCQRPQ*MPRAGNVHSHGTCR
Trigger: ACGGCACGTGCCATGGCTATGCACATTGCCTGCCCGTGGCATCAACTGGGGCCGCTGGCACTTGTCTAGGATGGAAGCCCCCAAGAAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
3UTR-3UTR TCA 90 bp CCTGGGGCATCCTCTGCAAGAGGATCCCACGAGAGTCCATTCCCCACCACAGGCCCCATCTTGGGTCCCTaGCCTCATTGGGCCTCACCT +
Preference number: 2 (lower is better)
Translates to: PGASSARGSHESPFPTTGPILGP*PHWASP
Trigger: AGGTGAGGCCCAATGAGGTCAGGGACCCAAGATGGG...GCCTGTGGTGGGGAATGGACTCTCGTGGGATCCTCTTGCAGAGGATGCCCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
3UTR-3UTR TCA 90 bp AGCAGACAGAAACCCCTGCCCTTCTTGGGGGCTTCCATCCTAGACAAGTGCCAGGCCTGGAGGCCCTGGTaGGCTTGCCCAGCACTGCTC +
Preference number: 2 (lower is better)
Translates to: SRQKPLPFLGASILDKCQAWRPW*ACPALL
Trigger: GAGCAGTGCTGGGCAAGCTCACCAGGGCCTCCAGGC...CTGGCACTTGTCTAGGATGGAAGCCCCCAAGAAGGGCAGGGGTTTCTGTCTGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
3UTR-3UTR TCA 90 bp TGGACTCTCGGTCAAGGACAGGGCTGGGAGAGTGCCAGTCTCCACAAACTGTGGCTCACTGCTGTGCCTTaGTCGGCCTGGACGAGCCCG +
Preference number: 2 (lower is better)
Translates to: WTLGQGQGWESASLHKLWLTAVP*SAWTSP
Trigger: CGGGCTCGTCCAGGCCGATCAAGGCACAGCAGTGAG...CCACAGTTTGTGGAGACTGGCACTCTCCCAGCCCTGTCCTTGACCGAGAGTCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
3UTR-3UTR GCA 90 bp CATCCTAGACAAGTGCCAGCGGCCCCAGTTGATGCCACGGGCAGGCAATGTGCAGCCTCCGCTGCTCACTaGTGTGCCTTGATCGGCCTG +
Preference number: 2 (lower is better)
Translates to: HPRQVPAAPVDATGRQCAASAAH*CALIGL
Trigger: CAGGCCGATCAAGGCACAGCAGTGAGCAGCGGAGGC...TGCACATTGCCTGCCCGTGGCATCAACTGGGGCCGCTGGCACTTGTCTAGGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
3UTR-3UTR CCA 90 bp TGGACTCTCGGTCAAGGACAGGGCTGGGAGAGTGCCAGTCTCCACAAACTGTGGAAGCCTCGACAGGGGTaGGCCCCAGGTCACAGGGAG +
Preference number: 2 (lower is better)
Translates to: WTLGQGQGWESASLHKLWKPRQG*APGHRE
Trigger: CTCCCTGTGACCTGGGGCCCACCCCTGTCGAGGCTT...CCACAGTTTGTGGAGACTGGCACTCTCCCAGCCCTGTCCTTGACCGAGAGTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
3UTR-3UTR CCA 90 bp AATGTGCATAGCCATGGCACGTGCCGTCCCTGTGGATTCGGATGCCTCCTCCCCCCAGGGGTGGTCCAATaGCCTGAGACGAGGGGACAG +
Preference number: 2 (lower is better)
Translates to: NVHSHGTCRPCGFGCLLPPGVVQ*PETRGQ
Trigger: CTGTCCCCTCGTCTCAGGCCATTGGACCACCCCTGG...GGGGAGGAGGCATCCGAATCCACAGGGACGGCACGTGCCATGGCTATGCACATT
62% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
3UTR-3UTR CCA 90 bp CTAGACAAGTGCCAGCGGCCCCAGTTGATGCCACGGGCAGGCAATGTGCATAGCGCAAAGGCAGGGAGGTaGCAAAGGCCAGCCCAACCC +
Preference number: 2 (lower is better)
Translates to: LDKCQRPQLMPRAGNVHSAKAGR*QRPAQP
Trigger: GGGTTGGGCTGGCCTTTGCCACCTCCCTGCCTTTGC...GCTATGCACATTGCCTGCCCGTGGCATCAACTGGGGCCGCTGGCACTTGTCTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
3UTR-3UTR TCA 90 bp CCTGGGGCATCCTCTGCAAGAGGATCCCACGAGAGTCCATTCCCCACCACAGGCTCATTGGGCCTCACCTaGAAACAGGCACCCAGGCAG +
Preference number: 2 (lower is better)
Translates to: PGASSARGSHESPFPTTGSLGLT*KQAPRQ
Trigger: CTGCCTGGGTGCCTGTTTTCAGGTGAGGCCCAATGA...GCCTGTGGTGGGGAATGGACTCTCGTGGGATCCTCTTGCAGAGGATGCCCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
3UTR-3UTR TCA 90 bp AATGTGCATAGCCATGGCACGTGCCGTCCCTGTGGATTCGGATGCCTCCTCCCCCCCATCTTGGGTCCCTaGCCTCATTGGGCCTCACCT +
Preference number: 2 (lower is better)
Translates to: NVHSHGTCRPCGFGCLLPPILGP*PHWASP
Trigger: AGGTGAGGCCCAATGAGGTCAGGGACCCAAGATGGG...GGGGAGGAGGCATCCGAATCCACAGGGACGGCACGTGCCATGGCTATGCACATT
61% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
3UTR-3UTR TCA 90 bp ACAGAAACCCCTGCCCTTCTTGGGGGCTTCCATCCTAGACAAGTGCCAGCGGCCCCATCATACCCAGTGTaGAGAGGGGCTGGGGACCCA +
Preference number: 2 (lower is better)
Translates to: TETPALLGGFHPRQVPAAPSYPV*RGAGDP
Trigger: TGGGTCCCCAGCCCCTCTTCACACTGGGTATGATGG...GGCCGCTGGCACTTGTCTAGGATGGAAGCCCCCAAGAAGGGCAGGGGTTTCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
3UTR-3UTR GCA 90 bp AGCAGACAGAAACCCCTGCCCTTCTTGGGGGCTTCCATCCTAGACAAGTGCCAGCCCGGAGCAGGAGGCTaGCTCTCTTCCACCCGTCCT +
Preference number: 2 (lower is better)
Translates to: SRQKPLPFLGASILDKCQPGAGG*LSSTRP
Trigger: AGGACGGGTGGAAGAGAGGCAGCCTCCTGCTCCGGG...CTGGCACTTGTCTAGGATGGAAGCCCCCAAGAAGGGCAGGGGTTTCTGTCTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
3UTR-3UTR GCA 90 bp TGGACTCTCGGTCAAGGACAGGGCTGGGAGAGTGCCAGTCTCCACAAACTGTGGAGCTCCCAGCAGGCCTaGTGCAGGTCAGAAGGGCCA +
Preference number: 2 (lower is better)
Translates to: WTLGQGQGWESASLHKLWSSQQA*CRSEGP
Trigger: TGGCCCTTCTGACCTGCAGCAGGCCTGCTGGGAGCT...CCACAGTTTGTGGAGACTGGCACTCTCCCAGCCCTGTCCTTGACCGAGAGTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
3UTR-3UTR GCA 90 bp TGGACTCTCGGTCAAGGACAGGGCTGGGAGAGTGCCAGTCTCCACAAACTGTGGGCTGTCCACAGGCCCTaGAAAGGCAGGGAGGTGGCA +
Preference number: 2 (lower is better)
Translates to: WTLGQGQGWESASLHKLWAVHRP*KGREVA
Trigger: TGCCACCTCCCTGCCTTTGCAGGGCCTGTGGACAGC...CCACAGTTTGTGGAGACTGGCACTCTCCCAGCCCTGTCCTTGACCGAGAGTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
3UTR-3UTR GCA 90 bp CATCCTAGACAAGTGCCAGCGGCCCCAGTTGATGCCACGGGCAGGCAATGTGCACGCTGCTCACTGCTGTaGCTTGATCGGCCTGGACGA +
Preference number: 2 (lower is better)
Translates to: HPRQVPAAPVDATGRQCARCSLL*LDRPGR
Trigger: TCGTCCAGGCCGATCAAGGCACAGCAGTGAGCAGCG...TGCACATTGCCTGCCCGTGGCATCAACTGGGGCCGCTGGCACTTGTCTAGGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
3UTR-3UTR GCA 90 bp ACAGAAACCCCTGCCCTTCTTGGGGGCTTCCATCCTAGACAAGTGCCAGCGGCCGCCTGGGGCATCCTCTaGAAGAGGATCCCACGAGAG +
Preference number: 2 (lower is better)
Translates to: TETPALLGGFHPRQVPAAAWGIL*KRIPRE
Trigger: CTCTCGTGGGATCCTCTTGCAGAGGATGCCCCAGGC...GGCCGCTGGCACTTGTCTAGGATGGAAGCCCCCAAGAAGGGCAGGGGTTTCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
3UTR-3UTR CCA 90 bp AATGTGCATAGCCATGGCACGTGCCGTCCCTGTGGATTCGGATGCCTCCTCCCCGGTCAAGGACAGGGCTaGGAGAGTGCCAGTCTCCAC +
Preference number: 2 (lower is better)
Translates to: NVHSHGTCRPCGFGCLLPGQGQG*ESASLH
Trigger: GTGGAGACTGGCACTCTCCCAGCCCTGTCCTTGACC...GGGGAGGAGGCATCCGAATCCACAGGGACGGCACGTGCCATGGCTATGCACATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
3UTR-3UTR GCA 90 bp CTAGACAAGTGCCAGCGGCCCCAGTTGATGCCACGGGCAGGCAATGTGCATAGCACCACAGGCCTCCGCTaGTCACTGCTGTGCCTTGAT +
Preference number: 2 (lower is better)
Translates to: LDKCQRPQLMPRAGNVHSTTGLR*SLLCLD
Trigger: ATCAAGGCACAGCAGTGAGCAGCGGAGGCCTGTGGT...GCTATGCACATTGCCTGCCCGTGGCATCAACTGGGGCCGCTGGCACTTGTCTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
3UTR-3UTR GCA 90 bp AGCAGACAGAAACCCCTGCCCTTCTTGGGGGCTTCCATCCTAGACAAGTGCCAGCCCTGTGGATTCGGATaGCTCCTCCCCTGCTGGGGT +
Preference number: 2 (lower is better)
Translates to: SRQKPLPFLGASILDKCQPCGFG*LLPCWG
Trigger: ACCCCAGCAGGGGAGGAGGCATCCGAATCCACAGGG...CTGGCACTTGTCTAGGATGGAAGCCCCCAAGAAGGGCAGGGGTTTCTGTCTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
3UTR-3UTR GCA 90 bp ACAGAAACCCCTGCCCTTCTTGGGGGCTTCCATCCTAGACAAGTGCCAGCGGCCCATAGCCATGGCACGTaGCGTCCCTGTGGATTCGGA +
Preference number: 2 (lower is better)
Translates to: TETPALLGGFHPRQVPAAHSHGT*RPCGFG
Trigger: TCCGAATCCACAGGGACGGCACGTGCCATGGCTATG...GGCCGCTGGCACTTGTCTAGGATGGAAGCCCCCAAGAAGGGCAGGGGTTTCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
3UTR-3UTR CCA 90 bp ACAGAAACCCCTGCCCTTCTTGGGGGCTTCCATCCTAGACAAGTGCCAGCGGCCAAAAGAGCCAGGTCCTaGCACCATCTCCGAGCTCCC +
Preference number: 2 (lower is better)
Translates to: TETPALLGGFHPRQVPAAKRARS*HHLRAP
Trigger: GGGAGCTCGGAGATGGTGCCAGGACCTGGCTCTTTT...GGCCGCTGGCACTTGTCTAGGATGGAAGCCCCCAAGAAGGGCAGGGGTTTCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
3UTR-3UTR TCA 90 bp TCGGTCAAGGACAGGGCTGGGAGAGTGCCAGTCTCCACAAACTGTGGATCCACTGGGAAGACCCAGCTGTaGGTGCACAGCAGGCACAGT +
Preference number: 2 (lower is better)
Translates to: SVKDRAGRVPVSTNCGSTGKTQL*VHSRHS
Trigger: ACTGTGCCTGCTGTGCACTCACAGCTGGGTCTTCCC...AGTGGATCCACAGTTTGTGGAGACTGGCACTCTCCCAGCCCTGTCCTTGACCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
3UTR-3UTR GCA 90 bp AGCAGACAGAAACCCCTGCCCTTCTTGGGGGCTTCCATCCTAGACAAGTGCCAGGAGCTTGCCCAGCACTaGTCCAACCCCTCCCTGAAC +
Preference number: 2 (lower is better)
Translates to: SRQKPLPFLGASILDKCQELAQH*SNPSLN
Trigger: GTTCAGGGAGGGGTTGGAGCAGTGCTGGGCAAGCTC...CTGGCACTTGTCTAGGATGGAAGCCCCCAAGAAGGGCAGGGGTTTCTGTCTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
3UTR-3UTR CCA 90 bp ACAGAAACCCCTGCCCTTCTTGGGGGCTTCCATCCTAGACAAGTGCCAGCGGCCATTCCACCCCATCTGTaGCCTCTCCAGCTGTCCACA +
Preference number: 2 (lower is better)
Translates to: TETPALLGGFHPRQVPAAIPPHL*PLQLST
Trigger: TGTGGACAGCTGGAGAGGCCACAGATGGGGTGGAAT...GGCCGCTGGCACTTGTCTAGGATGGAAGCCCCCAAGAAGGGCAGGGGTTTCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
3UTR-3UTR CCA 90 bp TCGGTCAAGGACAGGGCTGGGAGAGTGCCAGTCTCCACAAACTGTGGATCCACTAGTGTGAAGAGGGGCTaGGGACCCACCACTCCTGAG +
Preference number: 2 (lower is better)
Translates to: SVKDRAGRVPVSTNCGSTSVKRG*GPTTPE
Trigger: CTCAGGAGTGGTGGGTCCCCAGCCCCTCTTCACACT...AGTGGATCCACAGTTTGTGGAGACTGGCACTCTCCCAGCCCTGTCCTTGACCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
3UTR-3UTR TCA 90 bp CTAGACAAGTGCCAGCGGCCCCAGTTGATGCCACGGGCAGGCAATGTGCATAGCCAACCAGGGGCCAACTaGAAAAATGCTGGACTCTCG +
Preference number: 2 (lower is better)
Translates to: LDKCQRPQLMPRAGNVHSQPGAN*KNAGLS
Trigger: CGAGAGTCCAGCATTTTTTCAGTTGGCCCCTGGTTG...GCTATGCACATTGCCTGCCCGTGGCATCAACTGGGGCCGCTGGCACTTGTCTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
3UTR-3UTR GCA 90 bp ATTCGACAGACACATATGAAGCACCTACTGTGTAAAGCTGCCTTTGCAAGCACTGGCCAACCCCAGCCCTaGCTGGAGGCCCTGGTGAGC +
Preference number: 2 (lower is better)
Translates to: IRQTHMKHLLCKAAFASTGQPQP*LEALVS
Trigger: GCTCACCAGGGCCTCCAGGCAGGGCTGGGGTTGGCC...AGTGCTTGCAAAGGCAGCTTTACACAGTAGGTGCTTCATATGTGTCTGTCGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620518.5
3UTR-3UTR TCA 90 bp ATTCGACAGACACATATGAAGCACCTACTGTGTAAAGCTGCCTTTGCAAGCACTGGGACCCACCACTCCTaGGAACAGCATCCTTGGGAA +
Preference number: 2 (lower is better)
Translates to: IRQTHMKHLLCKAAFASTGTHHS*EQHPWE
Trigger: TTCCCAAGGATGCTGTTCTCAGGAGTGGTGGGTCCC...AGTGCTTGCAAAGGCAGCTTTACACAGTAGGTGCTTCATATGTGTCTGTCGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620518.5
3UTR-3UTR CCA 90 bp ATTCGACAGACACATATGAAGCACCTACTGTGTAAAGCTGCCTTTGCAAGCACTACGAGGGGACAGGGCTaGCCTATTAAGAGGAGCCAC +
Preference number: 2 (lower is better)
Translates to: IRQTHMKHLLCKAAFASTTRGQG*PIKRSH
Trigger: GTGGCTCCTCTTAATAGGCCAGCCCTGTCCCCTCGT...AGTGCTTGCAAAGGCAGCTTTACACAGTAGGTGCTTCATATGTGTCTGTCGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620518.5
3UTR-3UTR CCA 90 bp ATTCGACAGACACATATGAAGCACCTACTGTGTAAAGCTGCCTTTGCAAGCACTATTCCACCCCATCTGTaGCCTCTCCAGCTGTCCACA +
Preference number: 2 (lower is better)
Translates to: IRQTHMKHLLCKAAFASTIPPHL*PLQLST
Trigger: TGTGGACAGCTGGAGAGGCCACAGATGGGGTGGAAT...AGTGCTTGCAAAGGCAGCTTTACACAGTAGGTGCTTCATATGTGTCTGTCGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620518.5
3UTR GCA 72 bp AGAGTCCATTCCCCACCACAGGCCTCCGCTGCTCACTaGTGTGCCTTGATCGGCCTGGACGAGCCCGCCCAC +
Preference number: 3 (lower is better)
Translates to: RVHSPPQASAAH*CALIGLDEPAH
Trigger: GTGGGCGGGCTCGTCCAGGCCGATCAAGGCACAGCAGTGAGCAGCGGAGGCCTGTGGTGGGGAATGGACTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
3UTR GCA 72 bp CATAGCCATGGCACGTGCCGTCCCTGTGGATTCGGATaGCTCCTCCCCTGCTGGGGTGAGGCAGCCAACCAG +
Preference number: 3 (lower is better)
Translates to: HSHGTCRPCGFG*LLPCWGEAANQ
Trigger: CTGGTTGGCTGCCTCACCCCAGCAGGGGAGGAGGCATCCGAATCCACAGGGACGGCACGTGCCATGGCTATG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
3UTR-3UTR CAA 90 bp AATGTGCATAGCCATGGCACGTGCCGTCCCTGTGGATTCGGATGCCTCCTCCCCGCTCACTGCTGTGCCTaGATCGGCCTGGACGAGCCC +
Preference number: 3 (lower is better)
Translates to: NVHSHGTCRPCGFGCLLPAHCCA*IGLDEP
Trigger: GGGCTCGTCCAGGCCGATCAAGGCACAGCAGTGAGC...GGGGAGGAGGCATCCGAATCCACAGGGACGGCACGTGCCATGGCTATGCACATT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
3UTR-3UTR CAA 90 bp CATCCTAGACAAGTGCCAGCGGCCCCAGTTGATGCCACGGGCAGGCAATGTGCAGCTCACTGCTGTGCCTaGATCGGCCTGGACGAGCCC +
Preference number: 3 (lower is better)
Translates to: HPRQVPAAPVDATGRQCAAHCCA*IGLDEP
Trigger: GGGCTCGTCCAGGCCGATCAAGGCACAGCAGTGAGC...TGCACATTGCCTGCCCGTGGCATCAACTGGGGCCGCTGGCACTTGTCTAGGATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
3UTR CCA 72 bp CACACCAGACACAGACTCCTGTCAGCTCAGGCGTCCTaGCCTAAGGAGGCAGGGCCCCCAAAAGAGCCAGGT +
Preference number: 3 (lower is better)
Translates to: HTRHRLLSAQAS*PKEAGPPKEPG
Trigger: ACCTGGCTCTTTTGGGGGCCCTGCCTCCTTAGGCCAGGACGCCTGAGCTGACAGGAGTCTGTGTCTGGTGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
3UTR CCA 72 bp GGGGTGGTCCAATGGCCTGAGACGAGGGGACAGGGCTaGCCTATTAAGAGGAGCCACCAGAGAAGGCACACC +
Preference number: 3 (lower is better)
Translates to: GVVQWPETRGQG*PIKRSHQRRHT
Trigger: GGTGTGCCTTCTCTGGTGGCTCCTCTTAATAGGCCAGCCCTGTCCCCTCGTCTCAGGCCATTGGACCACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
3UTR CCA 72 bp GCCCACACCTCCATCATACCCAGTGTGAAGAGGGGCTaGGGACCCACCACTCCTGAGAACAGCATCCTTGGG +
Preference number: 3 (lower is better)
Translates to: AHTSIIPSVKRG*GPTTPENSILG
Trigger: CCCAAGGATGCTGTTCTCAGGAGTGGTGGGTCCCCAGCCCCTCTTCACACTGGGTATGATGGAGGTGTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
3UTR TCA 72 bp TGCAGGTCAGAAGGGCCACATCCCATCTTGGGTCCCTaGCCTCATTGGGCCTCACCTGAAAACAGGCACCCA +
Preference number: 3 (lower is better)
Translates to: CRSEGPHPILGP*PHWASPENRHP
Trigger: TGGGTGCCTGTTTTCAGGTGAGGCCCAATGAGGTCAGGGACCCAAGATGGGATGTGGCCCTTCTGACCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
3UTR GCA 72 bp ATGCTGGACTCTCGGTCAAGGACAGGGCTGGGAGAGTaGCAGTCTCCACAAACTGTGGATCCACTAGAGGGT +
Preference number: 3 (lower is better)
Translates to: MLDSRSRTGLGE*QSPQTVDPLEG
Trigger: ACCCTCTAGTGGATCCACAGTTTGTGGAGACTGGCACTCTCCCAGCCCTGTCCTTGACCGAGAGTCCAGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR TCA 90 bp GGCCGCTGGTTCCACAGCCCATCACCTGGAGGTGATGGAGGCCAACCCCAGCCCCGCCCGCTTCCTGCGTaGTCTCCAAGGGTGGGCCAG +
Preference number: 4 (lower is better)
Translates to: GRWFHSPSPGGDGGQPQPRPLPA*SPRVGQ
Trigger: CTGGCCCACCCTTGGAGATCACGCAGGAAGCGGGCG...GGGCTGGGGTTGGCCTCCATCACCTCCAGGTGATGGGCTGTGGAACCAGCGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR CCA 90 bp GGCCGCTGGTTCCACAGCCCATCACCTGGAGGTGATGGAGGCCAACCCCAGCCCTCAGCTCAGGCGTCCTaGCCTAAGGAGGCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: GRWFHSPSPGGDGGQPQPSAQAS*PKEAGP
Trigger: GGGCCCTGCCTCCTTAGGCCAGGACGCCTGAGCTGA...GGGCTGGGGTTGGCCTCCATCACCTCCAGGTGATGGGCTGTGGAACCAGCGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR TCA 90 bp CTCAGGCGTCCTGGCCTAAGGAGGCAGGGCCCCCAAAAGAGCCAGGTCCTGGCACTCACTGCTGTGCCTTaGTCGGCCTGGACGAGCCCG +
Preference number: 4 (lower is better)
Translates to: LRRPGLRRQGPQKSQVLALTAVP*SAWTSP
Trigger: CGGGCTCGTCCAGGCCGATCAAGGCACAGCAGTGAG...TGCCAGGACCTGGCTCTTTTGGGGGCCCTGCCTCCTTAGGCCAGGACGCCTGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR CCA 90 bp GCTGCTCACTGCTGTGCCTTGATCGGCCTGGACGAGCCCGCCCACACCTCCATCAAGCCTCGACAGGGGTaGGCCCCAGGTCACAGGGAG +
Preference number: 4 (lower is better)
Translates to: AAHCCALIGLDEPAHTSIKPRQG*APGHRE
Trigger: CTCCCTGTGACCTGGGGCCCACCCCTGTCGAGGCTT...GATGGAGGTGTGGGCGGGCTCGTCCAGGCCGATCAAGGCACAGCAGTGAGCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR GCA 90 bp CATCCTAGACAAGTGCCAGCGGCCCCAGTTGATGCCACGGGCAGGCAATGTGCACGTCGTAGGGCAGGTTaGCGTGGCGGTCCCGCAGGG +
Preference number: 4 (lower is better)
Translates to: HPRQVPAAPVDATGRQCARRRAG*RGGPAG
Trigger: CCCTGCGGGACCGCCACGGCAACCTGCCCTACGACG...TGCACATTGCCTGCCCGTGGCATCAACTGGGGCCGCTGGCACTTGTCTAGGATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR GCA 90 bp CTCAGGCGTCCTGGCCTAAGGAGGCAGGGCCCCCAAAAGAGCCAGGTCCTGGCAAGCTCCCAGCAGGCCTaGTGCAGGTCAGAAGGGCCA +
Preference number: 4 (lower is better)
Translates to: LRRPGLRRQGPQKSQVLASSQQA*CRSEGP
Trigger: TGGCCCTTCTGACCTGCAGCAGGCCTGCTGGGAGCT...TGCCAGGACCTGGCTCTTTTGGGGGCCCTGCCTCCTTAGGCCAGGACGCCTGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR GCA 90 bp ACAGAAACCCCTGCCCTTCTTGGGGGCTTCCATCCTAGACAAGTGCCAGCGGCCGGCCAACCCCAGCCCTaGCTGGAGGCCCTGGTGAGC +
Preference number: 4 (lower is better)
Translates to: TETPALLGGFHPRQVPAAGQPQP*LEALVS
Trigger: GCTCACCAGGGCCTCCAGGCAGGGCTGGGGTTGGCC...GGCCGCTGGCACTTGTCTAGGATGGAAGCCCCCAAGAAGGGCAGGGGTTTCTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR GCA 90 bp AATGTGCATAGCCATGGCACGTGCCGTCCCTGTGGATTCGGATGCCTCCTCCCCGGCCAACCCCAGCCCTaGCTGGAGGCCCTGGTGAGC +
Preference number: 4 (lower is better)
Translates to: NVHSHGTCRPCGFGCLLPGQPQP*LEALVS
Trigger: GCTCACCAGGGCCTCCAGGCAGGGCTGGGGTTGGCC...GGGGAGGAGGCATCCGAATCCACAGGGACGGCACGTGCCATGGCTATGCACATT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR GCA 90 bp CTCAGGCGTCCTGGCCTAAGGAGGCAGGGCCCCCAAAAGAGCCAGGTCCTGGCACCCTGTGGATTCGGATaGCTCCTCCCCTGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: LRRPGLRRQGPQKSQVLAPCGFG*LLPCWG
Trigger: ACCCCAGCAGGGGAGGAGGCATCCGAATCCACAGGG...TGCCAGGACCTGGCTCTTTTGGGGGCCCTGCCTCCTTAGGCCAGGACGCCTGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR GCA 90 bp GGCCGCTGGTTCCACAGCCCATCACCTGGAGGTGATGGAGGCCAACCCCAGCCCCACGGGCAGGCAATGTaGATAGCCATGGCACGTGCC +
Preference number: 4 (lower is better)
Translates to: GRWFHSPSPGGDGGQPQPHGQAM*IAMARA
Trigger: GGCACGTGCCATGGCTATGCACATTGCCTGCCCGTG...GGGCTGGGGTTGGCCTCCATCACCTCCAGGTGATGGGCTGTGGAACCAGCGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR CCA 90 bp CTCAGGCGTCCTGGCCTAAGGAGGCAGGGCCCCCAAAAGAGCCAGGTCCTGGCATCCAGGTTGTGCACCTaGTGGTGCCAGCCACTGGGC +
Preference number: 4 (lower is better)
Translates to: LRRPGLRRQGPQKSQVLASRLCT*WCQPLG
Trigger: GCCCAGTGGCTGGCACCACCAGGTGCACAACCTGGA...TGCCAGGACCTGGCTCTTTTGGGGGCCCTGCCTCCTTAGGCCAGGACGCCTGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR CCA 90 bp GGCCGCTGGTTCCACAGCCCATCACCTGGAGGTGATGGAGGCCAACCCCAGCCCAGTGTGAAGAGGGGCTaGGGACCCACCACTCCTGAG +
Preference number: 4 (lower is better)
Translates to: GRWFHSPSPGGDGGQPQPSVKRG*GPTTPE
Trigger: CTCAGGAGTGGTGGGTCCCCAGCCCCTCTTCACACT...GGGCTGGGGTTGGCCTCCATCACCTCCAGGTGATGGGCTGTGGAACCAGCGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR CCA 90 bp GGCCGCTGGTTCCACAGCCCATCACCTGGAGGTGATGGAGGCCAACCCCAGCCCGGTCAAGGACAGGGCTaGGAGAGTGCCAGTCTCCAC +
Preference number: 4 (lower is better)
Translates to: GRWFHSPSPGGDGGQPQPGQGQG*ESASLH
Trigger: GTGGAGACTGGCACTCTCCCAGCCCTGTCCTTGACC...GGGCTGGGGTTGGCCTCCATCACCTCCAGGTGATGGGCTGTGGAACCAGCGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR CCA 90 bp GCTGCTCACTGCTGTGCCTTGATCGGCCTGGACGAGCCCGCCCACACCTCCATCCACGTGCCGTCCCTGTaGATTCGGATGCCTCCTCCC +
Preference number: 4 (lower is better)
Translates to: AAHCCALIGLDEPAHTSIHVPSL*IRMPPP
Trigger: GGGAGGAGGCATCCGAATCCACAGGGACGGCACGTG...GATGGAGGTGTGGGCGGGCTCGTCCAGGCCGATCAAGGCACAGCAGTGAGCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR TCA 90 bp TTGATCGGCCTGGACGAGCCCGCCCACACCTCCATCATACCCAGTGTGAAGAGGCGCCCGCTTCCTGCGTaGTCTCCAAGGGTGGGCCAG +
Preference number: 4 (lower is better)
Translates to: LIGLDEPAHTSIIPSVKRRPLPA*SPRVGQ
Trigger: CTGGCCCACCCTTGGAGATCACGCAGGAAGCGGGCG...CCTCTTCACACTGGGTATGATGGAGGTGTGGGCGGGCTCGTCCAGGCCGATCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR TCA 90 bp GGCCGCTGGTTCCACAGCCCATCACCTGGAGGTGATGGAGGCCAACCCCAGCCCTCATTGGGCCTCACCTaGAAACAGGCACCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: GRWFHSPSPGGDGGQPQPSLGLT*KQAPRQ
Trigger: CTGCCTGGGTGCCTGTTTTCAGGTGAGGCCCAATGA...GGGCTGGGGTTGGCCTCCATCACCTCCAGGTGATGGGCTGTGGAACCAGCGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR TCA 90 bp GCTGCTCACTGCTGTGCCTTGATCGGCCTGGACGAGCCCGCCCACACCTCCATCCCCATCTTGGGTCCCTaGCCTCATTGGGCCTCACCT +
Preference number: 4 (lower is better)
Translates to: AAHCCALIGLDEPAHTSIPILGP*PHWASP
Trigger: AGGTGAGGCCCAATGAGGTCAGGGACCCAAGATGGG...GATGGAGGTGTGGGCGGGCTCGTCCAGGCCGATCAAGGCACAGCAGTGAGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR TCA 90 bp AATGTGCATAGCCATGGCACGTGCCGTCCCTGTGGATTCGGATGCCTCCTCCCCGCCTGGAGGCCCTGGTaGGCTTGCCCAGCACTGCTC +
Preference number: 4 (lower is better)
Translates to: NVHSHGTCRPCGFGCLLPAWRPW*ACPALL
Trigger: GAGCAGTGCTGGGCAAGCTCACCAGGGCCTCCAGGC...GGGGAGGAGGCATCCGAATCCACAGGGACGGCACGTGCCATGGCTATGCACATT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR TCA 90 bp AGCCAGGGGTGGTCCAATGGCCTGAGACGAGGGGACAGGGCTGGCCTATTAAGAGCCTGGAGGCCCTGGTaGGCTTGCCCAGCACTGCTC +
Preference number: 4 (lower is better)
Translates to: SQGWSNGLRRGDRAGLLRAWRPW*ACPALL
Trigger: GAGCAGTGCTGGGCAAGCTCACCAGGGCCTCCAGGC...TCTTAATAGGCCAGCCCTGTCCCCTCGTCTCAGGCCATTGGACCACCCCTGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR TCA 90 bp CATCCTAGACAAGTGCCAGCGGCCCCAGTTGATGCCACGGGCAGGCAATGTGCAGCCAGCGGCCCCAGTTaGTGCCACGGGCAGGCAATG +
Preference number: 4 (lower is better)
Translates to: HPRQVPAAPVDATGRQCAASGPS*CHGQAM
Trigger: CATTGCCTGCCCGTGGCATCAACTGGGGCCGCTGGC...TGCACATTGCCTGCCCGTGGCATCAACTGGGGCCGCTGGCACTTGTCTAGGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR GCA 90 bp GGCCGCTGGTTCCACAGCCCATCACCTGGAGGTGATGGAGGCCAACCCCAGCCCATGATGACCTCCTCCTaGACGGCGCATAGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: GRWFHSPSPGGDGGQPQPMMTSS*TAHSSC
Trigger: GCAGGAGCTATGCGCCGTGCAGGAGGAGGTCATCAT...GGGCTGGGGTTGGCCTCCATCACCTCCAGGTGATGGGCTGTGGAACCAGCGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438896.3
CDS-3UTR GCA 90 bp GGCCGCTGGTTCCACAGCCCATCACCTGGAGGTGATGGAGGCCAACCCCAGCCCTATCCTCACGACAGGTaGTATGGGGCCGCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: GRWFHSPSPGGDGGQPQPYPHDR*YGAAAA
Trigger: TGCTGCTGCGGCCCCATAGCACCTGTCGTGAGGATA...GGGCTGGGGTTGGCCTCCATCACCTCCAGGTGATGGGCTGTGGAACCAGCGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR GCA 90 bp GCTGCTCACTGCTGTGCCTTGATCGGCCTGGACGAGCCCGCCCACACCTCCATCGAGCTTGCCCAGCACTaGTCCAACCCCTCCCTGAAC +
Preference number: 4 (lower is better)
Translates to: AAHCCALIGLDEPAHTSIELAQH*SNPSLN
Trigger: GTTCAGGGAGGGGTTGGAGCAGTGCTGGGCAAGCTC...GATGGAGGTGTGGGCGGGCTCGTCCAGGCCGATCAAGGCACAGCAGTGAGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR GCA 90 bp GCTGCTCACTGCTGTGCCTTGATCGGCCTGGACGAGCCCGCCCACACCTCCATCCACGGGCAGGCAATGTaGATAGCCATGGCACGTGCC +
Preference number: 4 (lower is better)
Translates to: AAHCCALIGLDEPAHTSIHGQAM*IAMARA
Trigger: GGCACGTGCCATGGCTATGCACATTGCCTGCCCGTG...GATGGAGGTGTGGGCGGGCTCGTCCAGGCCGATCAAGGCACAGCAGTGAGCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR CCA 90 bp TCGGTCAAGGACAGGGCTGGGAGAGTGCCAGTCTCCACAAACTGTGGATCCACTCCCAGGCCTCGGAAGTaGCTGTCGGCGAGGGCGCGC +
Preference number: 4 (lower is better)
Translates to: SVKDRAGRVPVSTNCGSTPRPRK*LSARAR
Trigger: GCGCGCCCTCGCCGACAGCCACTTCCGAGGCCTGGG...AGTGGATCCACAGTTTGTGGAGACTGGCACTCTCCCAGCCCTGTCCTTGACCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR CCA 90 bp AGCAGACAGAAACCCCTGCCCTTCTTGGGGGCTTCCATCCTAGACAAGTGCCAGCCCAGGCCTCGGAAGTaGCTGTCGGCGAGGGCGCGC +
Preference number: 4 (lower is better)
Translates to: SRQKPLPFLGASILDKCQPRPRK*LSARAR
Trigger: GCGCGCCCTCGCCGACAGCCACTTCCGAGGCCTGGG...CTGGCACTTGTCTAGGATGGAAGCCCCCAAGAAGGGCAGGGGTTTCTGTCTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR CCA 90 bp CTCAGGCGTCCTGGCCTAAGGAGGCAGGGCCCCCAAAAGAGCCAGGTCCTGGCAGCTGCAGCAGCTCTTTaGGCTGTGGTGAGAACGCGC +
Preference number: 4 (lower is better)
Translates to: LRRPGLRRQGPQKSQVLAAAAAL*AVVRTR
Trigger: GCGCGTTCTCACCACAGCCCAAAGAGCTGCTGCAGC...TGCCAGGACCTGGCTCTTTTGGGGGCCCTGCCTCCTTAGGCCAGGACGCCTGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR CCA 90 bp GGCCGCTGGTTCCACAGCCCATCACCTGGAGGTGATGGAGGCCAACCCCAGCCCATGATGACCTGGCAGTaGTGGTGCCAGTCGGGCATG +
Preference number: 4 (lower is better)
Translates to: GRWFHSPSPGGDGGQPQPMMTWQ*WCQSGM
Trigger: CATGCCCGACTGGCACCACCACTGCCAGGTCATCAT...GGGCTGGGGTTGGCCTCCATCACCTCCAGGTGATGGGCTGTGGAACCAGCGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620518.5
CDS-3UTR TCA 90 bp AATGTGCATAGCCATGGCACGTGCCGTCCCTGTGGATTCGGATGCCTCCTCCCCTGCCCCAGCCCTGCGTaGAGGCGCTGGAAAACACGC +
Preference number: 4 (lower is better)
Translates to: NVHSHGTCRPCGFGCLLPCPSPA*RRWKTR
Trigger: GCGTGTTTTCCAGCGCCTTCACGCAGGGCTGGGGCA...GGGGAGGAGGCATCCGAATCCACAGGGACGGCACGTGCCATGGCTATGCACATT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR TCA 90 bp AGCCAGGGGTGGTCCAATGGCCTGAGACGAGGGGACAGGGCTGGCCTATTAAGACCCATCACCTGGAGGTaGTGGAGGCCAACCCCAGCC +
Preference number: 4 (lower is better)
Translates to: SQGWSNGLRRGDRAGLLRPITWR*WRPTPA
Trigger: GGCTGGGGTTGGCCTCCATCACCTCCAGGTGATGGG...TCTTAATAGGCCAGCCCTGTCCCCTCGTCTCAGGCCATTGGACCACCCCTGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR TCA 90 bp CATCCTAGACAAGTGCCAGCGGCCCCAGTTGATGCCACGGGCAGGCAATGTGCACCCATCACCTGGAGGTaGTGGAGGCCAACCCCAGCC +
Preference number: 4 (lower is better)
Translates to: HPRQVPAAPVDATGRQCAPITWR*WRPTPA
Trigger: GGCTGGGGTTGGCCTCCATCACCTCCAGGTGATGGG...TGCACATTGCCTGCCCGTGGCATCAACTGGGGCCGCTGGCACTTGTCTAGGATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR TCA 90 bp AATGTGCATAGCCATGGCACGTGCCGTCCCTGTGGATTCGGATGCCTCCTCCCCCTCACTGCTGTGCCTTaGTCGGCCTGGACGAGCCCG +
Preference number: 4 (lower is better)
Translates to: NVHSHGTCRPCGFGCLLPLTAVP*SAWTSP
Trigger: CGGGCTCGTCCAGGCCGATCAAGGCACAGCAGTGAG...GGGGAGGAGGCATCCGAATCCACAGGGACGGCACGTGCCATGGCTATGCACATT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR GCA 90 bp AATGTGCATAGCCATGGCACGTGCCGTCCCTGTGGATTCGGATGCCTCCTCCCCCGGCTGCCCCAGCCCTaGGTGAAGGCGCTGGAAAAC +
Preference number: 4 (lower is better)
Translates to: NVHSHGTCRPCGFGCLLPRLPQP*VKALEN
Trigger: GTTTTCCAGCGCCTTCACGCAGGGCTGGGGCAGCCG...GGGGAGGAGGCATCCGAATCCACAGGGACGGCACGTGCCATGGCTATGCACATT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR GCA 90 bp AGGCACACCAGACACAGACTCCTGTCAGCTCAGGCGTCCTGGCCTAAGGAGGCACGGCTGCCCCAGCCCTaGGTGAAGGCGCTGGAAAAC +
Preference number: 4 (lower is better)
Translates to: RHTRHRLLSAQASWPKEARLPQP*VKALEN
Trigger: GTTTTCCAGCGCCTTCACGCAGGGCTGGGGCAGCCG...TGCCTCCTTAGGCCAGGACGCCTGAGCTGACAGGAGTCTGTGTCTGGTGTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR GCA 90 bp CTCAGGCGTCCTGGCCTAAGGAGGCAGGGCCCCCAAAAGAGCCAGGTCCTGGCAGTGTGTGTCGCAGAGTaGTGGGGAGGTCACGTCGTA +
Preference number: 4 (lower is better)
Translates to: LRRPGLRRQGPQKSQVLAVCVAE*WGGHVV
Trigger: TACGACGTGACCTCCCCAGCACTCTGCGACACACAC...TGCCAGGACCTGGCTCTTTTGGGGGCCCTGCCTCCTTAGGCCAGGACGCCTGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR GCA 90 bp CTCAGGCGTCCTGGCCTAAGGAGGCAGGGCCCCCAAAAGAGCCAGGTCCTGGCATTGTGCACCTGGTGGTaGCAGCCACTGGGCACAAAC +
Preference number: 4 (lower is better)
Translates to: LRRPGLRRQGPQKSQVLALCTWW*QPLGTN
Trigger: GTTTGTGCCCAGTGGCTGGCACCACCAGGTGCACAA...TGCCAGGACCTGGCTCTTTTGGGGGCCCTGCCTCCTTAGGCCAGGACGCCTGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR GCA 90 bp CATCCTAGACAAGTGCCAGCGGCCCCAGTTGATGCCACGGGCAGGCAATGTGCAACCGTCCTCAGCGGCTaGCTCCCTCAGGACCAGGAG +
Preference number: 4 (lower is better)
Translates to: HPRQVPAAPVDATGRQCATVLSG*LPQDQE
Trigger: CTCCTGGTCCTGAGGGAGGCAGCCGCTGAGGACGGT...TGCACATTGCCTGCCCGTGGCATCAACTGGGGCCGCTGGCACTTGTCTAGGATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR GCA 90 bp CTAGACAAGTGCCAGCGGCCCCAGTTGATGCCACGGGCAGGCAATGTGCATAGCACCGTCCTCAGCGGCTaGCTCCCTCAGGACCAGGAG +
Preference number: 4 (lower is better)
Translates to: LDKCQRPQLMPRAGNVHSTVLSG*LPQDQE
Trigger: CTCCTGGTCCTGAGGGAGGCAGCCGCTGAGGACGGT...GCTATGCACATTGCCTGCCCGTGGCATCAACTGGGGCCGCTGGCACTTGTCTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR GCA 90 bp CCTGGGGCATCCTCTGCAAGAGGATCCCACGAGAGTCCATTCCCCACCACAGGCCTCTGGAAGTCGGGGTaGGCAACCAAGGAGGCCAGC +
Preference number: 4 (lower is better)
Translates to: PGASSARGSHESPFPTTGLWKSG*ATKEAS
Trigger: GCTGGCCTCCTTGGTTGCGCACCCCGACTTCCAGAG...GCCTGTGGTGGGGAATGGACTCTCGTGGGATCCTCTTGCAGAGGATGCCCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR GCA 90 bp AGCCAGGGGTGGTCCAATGGCCTGAGACGAGGGGACAGGGCTGGCCTATTAAGACCCGGAGCAGGAGGCTaGCTCTCTTCCACCCGTCCT +
Preference number: 4 (lower is better)
Translates to: SQGWSNGLRRGDRAGLLRPGAGG*LSSTRP
Trigger: AGGACGGGTGGAAGAGAGGCAGCCTCCTGCTCCGGG...TCTTAATAGGCCAGCCCTGTCCCCTCGTCTCAGGCCATTGGACCACCCCTGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR GCA 90 bp CCTGGGGCATCCTCTGCAAGAGGATCCCACGAGAGTCCATTCCCCACCACAGGCGCTGTCCACAGGCCCTaGAAAGGCAGGGAGGTGGCA +
Preference number: 4 (lower is better)
Translates to: PGASSARGSHESPFPTTGAVHRP*KGREVA
Trigger: TGCCACCTCCCTGCCTTTGCAGGGCCTGTGGACAGC...GCCTGTGGTGGGGAATGGACTCTCGTGGGATCCTCTTGCAGAGGATGCCCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR CCA 90 bp CCTGGGGCATCCTCTGCAAGAGGATCCCACGAGAGTCCATTCCCCACCACAGGCGGTGGGCCAGCAAGCTaGTTCCGTGGGTGCAGGTGT +
Preference number: 4 (lower is better)
Translates to: PGASSARGSHESPFPTTGGGPAS*FRGCRC
Trigger: ACACCTGCACCCACGGAACCAGCTTGCTGGCCCACC...GCCTGTGGTGGGGAATGGACTCTCGTGGGATCCTCTTGCAGAGGATGCCCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR CCA 90 bp CCTGGGGCATCCTCTGCAAGAGGATCCCACGAGAGTCCATTCCCCACCACAGGCTCCAGGTTGTGCACCTaGTGGTGCCAGCCACTGGGC +
Preference number: 4 (lower is better)
Translates to: PGASSARGSHESPFPTTGSRLCT*WCQPLG
Trigger: GCCCAGTGGCTGGCACCACCAGGTGCACAACCTGGA...GCCTGTGGTGGGGAATGGACTCTCGTGGGATCCTCTTGCAGAGGATGCCCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR CCA 90 bp AGCCAGGGGTGGTCCAATGGCCTGAGACGAGGGGACAGGGCTGGCCTATTAAGAAAGCCTCGACAGGGGTaGGCCCCAGGTCACAGGGAG +
Preference number: 4 (lower is better)
Translates to: SQGWSNGLRRGDRAGLLRKPRQG*APGHRE
Trigger: CTCCCTGTGACCTGGGGCCCACCCCTGTCGAGGCTT...TCTTAATAGGCCAGCCCTGTCCCCTCGTCTCAGGCCATTGGACCACCCCTGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR CCA 90 bp CTCAGGCGTCCTGGCCTAAGGAGGCAGGGCCCCCAAAAGAGCCAGGTCCTGGCAACGAGGGGACAGGGCTaGCCTATTAAGAGGAGCCAC +
Preference number: 4 (lower is better)
Translates to: LRRPGLRRQGPQKSQVLATRGQG*PIKRSH
Trigger: GTGGCTCCTCTTAATAGGCCAGCCCTGTCCCCTCGT...TGCCAGGACCTGGCTCTTTTGGGGGCCCTGCCTCCTTAGGCCAGGACGCCTGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR TCA 90 bp GCTGCTCACTGCTGTGCCTTGATCGGCCTGGACGAGCCCGCCCACACCTCCATCAGTACACAGGCAGGGTaGAAACGTCCTCCACCGGAA +
Preference number: 4 (lower is better)
Translates to: AAHCCALIGLDEPAHTSISTQAG*KRPPPE
Trigger: TTCCGGTGGAGGACGTTTTCACCCTGCCTGTGTACT...GATGGAGGTGTGGGCGGGCTCGTCCAGGCCGATCAAGGCACAGCAGTGAGCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR TCA 90 bp CCTGGGGCATCCTCTGCAAGAGGATCCCACGAGAGTCCATTCCCCACCACAGGCGGGAAGACCCAGCTGTaGGTGCACAGCAGGCACAGT +
Preference number: 4 (lower is better)
Translates to: PGASSARGSHESPFPTTGGKTQL*VHSRHS
Trigger: ACTGTGCCTGCTGTGCACTCACAGCTGGGTCTTCCC...GCCTGTGGTGGGGAATGGACTCTCGTGGGATCCTCTTGCAGAGGATGCCCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR GCA 90 bp CTAGACAAGTGCCAGCGGCCCCAGTTGATGCCACGGGCAGGCAATGTGCATAGCCTCTGGAAGTCGGGGTaGGCAACCAAGGAGGCCAGC +
Preference number: 4 (lower is better)
Translates to: LDKCQRPQLMPRAGNVHSLWKSG*ATKEAS
Trigger: GCTGGCCTCCTTGGTTGCGCACCCCGACTTCCAGAG...GCTATGCACATTGCCTGCCCGTGGCATCAACTGGGGCCGCTGGCACTTGTCTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR GCA 90 bp TGGACTCTCGGTCAAGGACAGGGCTGGGAGAGTGCCAGTCTCCACAAACTGTGGCCCGGAGCAGGAGGCTaGCTCTCTTCCACCCGTCCT +
Preference number: 4 (lower is better)
Translates to: WTLGQGQGWESASLHKLWPGAGG*LSSTRP
Trigger: AGGACGGGTGGAAGAGAGGCAGCCTCCTGCTCCGGG...CCACAGTTTGTGGAGACTGGCACTCTCCCAGCCCTGTCCTTGACCGAGAGTCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR GCA 90 bp AATGTGCATAGCCATGGCACGTGCCGTCCCTGTGGATTCGGATGCCTCCTCCCCGCTGTCCACAGGCCCTaGAAAGGCAGGGAGGTGGCA +
Preference number: 4 (lower is better)
Translates to: NVHSHGTCRPCGFGCLLPAVHRP*KGREVA
Trigger: TGCCACCTCCCTGCCTTTGCAGGGCCTGTGGACAGC...GGGGAGGAGGCATCCGAATCCACAGGGACGGCACGTGCCATGGCTATGCACATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR GCA 90 bp CTCAGGCGTCCTGGCCTAAGGAGGCAGGGCCCCCAAAAGAGCCAGGTCCTGGCAACAGGGCTGGGAGAGTaGCAGTCTCCACAAACTGTG +
Preference number: 4 (lower is better)
Translates to: LRRPGLRRQGPQKSQVLATGLGE*QSPQTV
Trigger: CACAGTTTGTGGAGACTGGCACTCTCCCAGCCCTGT...TGCCAGGACCTGGCTCTTTTGGGGGCCCTGCCTCCTTAGGCCAGGACGCCTGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR GCA 90 bp CTAGACAAGTGCCAGCGGCCCCAGTTGATGCCACGGGCAGGCAATGTGCATAGCCCCTGTGGATTCGGATaGCTCCTCCCCTGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: LDKCQRPQLMPRAGNVHSPCGFG*LLPCWG
Trigger: ACCCCAGCAGGGGAGGAGGCATCCGAATCCACAGGG...GCTATGCACATTGCCTGCCCGTGGCATCAACTGGGGCCGCTGGCACTTGTCTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR GCA 90 bp AGGCACACCAGACACAGACTCCTGTCAGCTCAGGCGTCCTGGCCTAAGGAGGCAACCTGGCAGTGGTGGTaGCAGTCGGGCATGGAGTCC +
Preference number: 4 (lower is better)
Translates to: RHTRHRLLSAQASWPKEATWQWW*QSGMES
Trigger: GGACTCCATGCCCGACTGGCACCACCACTGCCAGGT...TGCCTCCTTAGGCCAGGACGCCTGAGCTGACAGGAGTCTGTGTCTGGTGTGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620518.5
CDS-3UTR CCA 90 bp AATGTGCATAGCCATGGCACGTGCCGTCCCTGTGGATTCGGATGCCTCCTCCCCGGCCTCTTCCTGCCCTaGGGGGAAGAGGAGCCACTT +
Preference number: 4 (lower is better)
Translates to: NVHSHGTCRPCGFGCLLPGLFLP*GEEEPL
Trigger: AAGTGGCTCCTCTTCCCCCCAGGGCAGGAAGAGGCC...GGGGAGGAGGCATCCGAATCCACAGGGACGGCACGTGCCATGGCTATGCACATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR CCA 90 bp CCTGGGGCATCCTCTGCAAGAGGATCCCACGAGAGTCCATTCCCCACCACAGGCGGTGGTGCCAGCCACTaGGCACAAACACCATCTCGC +
Preference number: 4 (lower is better)
Translates to: PGASSARGSHESPFPTTGGGASH*AQTPSR
Trigger: GCGAGATGGTGTTTGTGCCCAGTGGCTGGCACCACC...GCCTGTGGTGGGGAATGGACTCTCGTGGGATCCTCTTGCAGAGGATGCCCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR CCA 90 bp CATCCTAGACAAGTGCCAGCGGCCCCAGTTGATGCCACGGGCAGGCAATGTGCACCAGGGGTGGTCCAATaGCCTGAGACGAGGGGACAG +
Preference number: 4 (lower is better)
Translates to: HPRQVPAAPVDATGRQCAPGVVQ*PETRGQ
Trigger: CTGTCCCCTCGTCTCAGGCCATTGGACCACCCCTGG...TGCACATTGCCTGCCCGTGGCATCAACTGGGGCCGCTGGCACTTGTCTAGGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR CCA 90 bp ACAGAAACCCCTGCCCTTCTTGGGGGCTTCCATCCTAGACAAGTGCCAGCGGCCCCAGGGGTGGTCCAATaGCCTGAGACGAGGGGACAG +
Preference number: 4 (lower is better)
Translates to: TETPALLGGFHPRQVPAAPGVVQ*PETRGQ
Trigger: CTGTCCCCTCGTCTCAGGCCATTGGACCACCCCTGG...GGCCGCTGGCACTTGTCTAGGATGGAAGCCCCCAAGAAGGGCAGGGGTTTCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR CCA 90 bp AATGTGCATAGCCATGGCACGTGCCGTCCCTGTGGATTCGGATGCCTCCTCCCCGCAAAGGCAGGGAGGTaGCAAAGGCCAGCCCAACCC +
Preference number: 4 (lower is better)
Translates to: NVHSHGTCRPCGFGCLLPAKAGR*QRPAQP
Trigger: GGGTTGGGCTGGCCTTTGCCACCTCCCTGCCTTTGC...GGGGAGGAGGCATCCGAATCCACAGGGACGGCACGTGCCATGGCTATGCACATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR CCA 90 bp AGGCACACCAGACACAGACTCCTGTCAGCTCAGGCGTCCTGGCCTAAGGAGGCAGCAAAGGCAGGGAGGTaGCAAAGGCCAGCCCAACCC +
Preference number: 4 (lower is better)
Translates to: RHTRHRLLSAQASWPKEAAKAGR*QRPAQP
Trigger: GGGTTGGGCTGGCCTTTGCCACCTCCCTGCCTTTGC...TGCCTCCTTAGGCCAGGACGCCTGAGCTGACAGGAGTCTGTGTCTGGTGTGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR CCA 90 bp GGCCGCTGGTTCCACAGCCCATCACCTGGAGGTGATGGAGGCCAACCCCAGCCCGGATTCAGCAGCAGATaGGATTCCACCCCATCTGTG +
Preference number: 4 (lower is better)
Translates to: GRWFHSPSPGGDGGQPQPGFSSR*DSTPSV
Trigger: CACAGATGGGGTGGAATCCCATCTGCTGCTGAATCC...GGGCTGGGGTTGGCCTCCATCACCTCCAGGTGATGGGCTGTGGAACCAGCGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
3UTR CAA 72 bp GGGGCTTCCATCCTAGACAAGTGCCAGCGGCCCCAGTaGATGCCACGGGCAGGCAATGTGCATAGCCATGGC +
Preference number: 4 (lower is better)
Translates to: GASILDKCQRPQ*MPRAGNVHSHG
Trigger: GCCATGGCTATGCACATTGCCTGCCCGTGGCATCAACTGGGGCCGCTGGCACTTGTCTAGGATGGAAGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR TCA 90 bp AGCAGACAGAAACCCCTGCCCTTCTTGGGGGCTTCCATCCTAGACAAGTGCCAGCCGGAGCGGAAACGGTaGGGACCAGCCTCGGAACCA +
Preference number: 4 (lower is better)
Translates to: SRQKPLPFLGASILDKCQPERKR*GPASEP
Trigger: TGGTTCCGAGGCTGGTCCTCACCGTTTCCGCTCCGG...CTGGCACTTGTCTAGGATGGAAGCCCCCAAGAAGGGCAGGGGTTTCTGTCTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438896.3
CDS-3UTR TCA 90 bp TCGGTCAAGGACAGGGCTGGGAGAGTGCCAGTCTCCACAAACTGTGGATCCACTTGCCCCAGCCCTGCGTaGAGGCGCTGGAAAACACGC +
Preference number: 4 (lower is better)
Translates to: SVKDRAGRVPVSTNCGSTCPSPA*RRWKTR
Trigger: GCGTGTTTTCCAGCGCCTTCACGCAGGGCTGGGGCA...AGTGGATCCACAGTTTGTGGAGACTGGCACTCTCCCAGCCCTGTCCTTGACCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR TCA 90 bp CCTGGGGCATCCTCTGCAAGAGGATCCCACGAGAGTCCATTCCCCACCACAGGCAGGCCAGCACCTCTGTaGTGCGCCCAACATCAAAGG +
Preference number: 4 (lower is better)
Translates to: PGASSARGSHESPFPTTGRPAPL*CAQHQR
Trigger: CCTTTGATGTTGGGCGCATCACAGAGGTGCTGGCCT...GCCTGTGGTGGGGAATGGACTCTCGTGGGATCCTCTTGCAGAGGATGCCCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR TCA 90 bp CATCCTAGACAAGTGCCAGCGGCCCCAGTTGATGCCACGGGCAGGCAATGTGCACTCTTTGGGCTGTGGTaGGAACGCGCTGGTGTCCAC +
Preference number: 4 (lower is better)
Translates to: HPRQVPAAPVDATGRQCALFGLW*ERAGVH
Trigger: GTGGACACCAGCGCGTTCTCACCACAGCCCAAAGAG...TGCACATTGCCTGCCCGTGGCATCAACTGGGGCCGCTGGCACTTGTCTAGGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR TCA 90 bp AGGCACACCAGACACAGACTCCTGTCAGCTCAGGCGTCCTGGCCTAAGGAGGCACTCTTTGGGCTGTGGTaGGAACGCGCTGGTGTCCAC +
Preference number: 4 (lower is better)
Translates to: RHTRHRLLSAQASWPKEALFGLW*ERAGVH
Trigger: GTGGACACCAGCGCGTTCTCACCACAGCCCAAAGAG...TGCCTCCTTAGGCCAGGACGCCTGAGCTGACAGGAGTCTGTGTCTGGTGTGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR TCA 90 bp CCTGGGGCATCCTCTGCAAGAGGATCCCACGAGAGTCCATTCCCCACCACAGGCGGGACCCACCACTCCTaGGAACAGCATCCTTGGGAA +
Preference number: 4 (lower is better)
Translates to: PGASSARGSHESPFPTTGGTHHS*EQHPWE
Trigger: TTCCCAAGGATGCTGTTCTCAGGAGTGGTGGGTCCC...GCCTGTGGTGGGGAATGGACTCTCGTGGGATCCTCTTGCAGAGGATGCCCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR TCA 90 bp AATGTGCATAGCCATGGCACGTGCCGTCCCTGTGGATTCGGATGCCTCCTCCCCCCATCATACCCAGTGTaGAGAGGGGCTGGGGACCCA +
Preference number: 4 (lower is better)
Translates to: NVHSHGTCRPCGFGCLLPPSYPV*RGAGDP
Trigger: TGGGTCCCCAGCCCCTCTTCACACTGGGTATGATGG...GGGGAGGAGGCATCCGAATCCACAGGGACGGCACGTGCCATGGCTATGCACATT
61% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR GCA 90 bp CCTGGGGCATCCTCTGCAAGAGGATCCCACGAGAGTCCATTCCCCACCACAGGCACGGCGCATAGCTCCTaGTGCAAGAAGCGCCACATG +
Preference number: 4 (lower is better)
Translates to: PGASSARGSHESPFPTTGTAHSS*CKKRHM
Trigger: CATGTGGCGCTTCTTGCAGCAGGAGCTATGCGCCGT...GCCTGTGGTGGGGAATGGACTCTCGTGGGATCCTCTTGCAGAGGATGCCCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR GCA 90 bp CTAGACAAGTGCCAGCGGCCCCAGTTGATGCCACGGGCAGGCAATGTGCATAGCCGCTGCTCACTGCTGTaGCTTGATCGGCCTGGACGA +
Preference number: 4 (lower is better)
Translates to: LDKCQRPQLMPRAGNVHSRCSLL*LDRPGR
Trigger: TCGTCCAGGCCGATCAAGGCACAGCAGTGAGCAGCG...GCTATGCACATTGCCTGCCCGTGGCATCAACTGGGGCCGCTGGCACTTGTCTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR GCA 90 bp AGGCACACCAGACACAGACTCCTGTCAGCTCAGGCGTCCTGGCCTAAGGAGGCACGCTGCTCACTGCTGTaGCTTGATCGGCCTGGACGA +
Preference number: 4 (lower is better)
Translates to: RHTRHRLLSAQASWPKEARCSLL*LDRPGR
Trigger: TCGTCCAGGCCGATCAAGGCACAGCAGTGAGCAGCG...TGCCTCCTTAGGCCAGGACGCCTGAGCTGACAGGAGTCTGTGTCTGGTGTGCCT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR GCA 90 bp TGGACTCTCGGTCAAGGACAGGGCTGGGAGAGTGCCAGTCTCCACAAACTGTGGGCCTCCGCTGCTCACTaGTGTGCCTTGATCGGCCTG +
Preference number: 4 (lower is better)
Translates to: WTLGQGQGWESASLHKLWASAAH*CALIGL
Trigger: CAGGCCGATCAAGGCACAGCAGTGAGCAGCGGAGGC...CCACAGTTTGTGGAGACTGGCACTCTCCCAGCCCTGTCCTTGACCGAGAGTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR GCA 90 bp AGCCAGGGGTGGTCCAATGGCCTGAGACGAGGGGACAGGGCTGGCCTATTAAGAGCCTGGGGCATCCTCTaGAAGAGGATCCCACGAGAG +
Preference number: 4 (lower is better)
Translates to: SQGWSNGLRRGDRAGLLRAWGIL*KRIPRE
Trigger: CTCTCGTGGGATCCTCTTGCAGAGGATGCCCCAGGC...TCTTAATAGGCCAGCCCTGTCCCCTCGTCTCAGGCCATTGGACCACCCCTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR GCA 90 bp AATGTGCATAGCCATGGCACGTGCCGTCCCTGTGGATTCGGATGCCTCCTCCCCGCCTGGGGCATCCTCTaGAAGAGGATCCCACGAGAG +
Preference number: 4 (lower is better)
Translates to: NVHSHGTCRPCGFGCLLPAWGIL*KRIPRE
Trigger: CTCTCGTGGGATCCTCTTGCAGAGGATGCCCCAGGC...GGGGAGGAGGCATCCGAATCCACAGGGACGGCACGTGCCATGGCTATGCACATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR CCA 90 bp CATCCTAGACAAGTGCCAGCGGCCCCAGTTGATGCCACGGGCAGGCAATGTGCATGTGTCGCAGAGTGCTaGGGAGGTCACGTCGTAGGG +
Preference number: 4 (lower is better)
Translates to: HPRQVPAAPVDATGRQCACVAEC*GGHVVG
Trigger: CCCTACGACGTGACCTCCCCAGCACTCTGCGACACA...TGCACATTGCCTGCCCGTGGCATCAACTGGGGCCGCTGGCACTTGTCTAGGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR CCA 90 bp ACAGAAACCCCTGCCCTTCTTGGGGGCTTCCATCCTAGACAAGTGCCAGCGGCCCGTGATCTCCAAGGGTaGGCCAGCAAGCTGGTTCCG +
Preference number: 4 (lower is better)
Translates to: TETPALLGGFHPRQVPAARDLQG*ASKLVP
Trigger: CGGAACCAGCTTGCTGGCCCACCCTTGGAGATCACG...GGCCGCTGGCACTTGTCTAGGATGGAAGCCCCCAAGAAGGGCAGGGGTTTCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR CCA 90 bp CATCCTAGACAAGTGCCAGCGGCCCCAGTTGATGCCACGGGCAGGCAATGTGCACGTGATCTCCAAGGGTaGGCCAGCAAGCTGGTTCCG +
Preference number: 4 (lower is better)
Translates to: HPRQVPAAPVDATGRQCARDLQG*ASKLVP
Trigger: CGGAACCAGCTTGCTGGCCCACCCTTGGAGATCACG...TGCACATTGCCTGCCCGTGGCATCAACTGGGGCCGCTGGCACTTGTCTAGGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR CCA 90 bp ACAGAAACCCCTGCCCTTCTTGGGGGCTTCCATCCTAGACAAGTGCCAGCGGCCCTGGTGTCCACTCTCTaGAAGTCGGGGTGCGCAACC +
Preference number: 4 (lower is better)
Translates to: TETPALLGGFHPRQVPAALVSTL*KSGCAT
Trigger: GGTTGCGCACCCCGACTTCCAGAGAGTGGACACCAG...GGCCGCTGGCACTTGTCTAGGATGGAAGCCCCCAAGAAGGGCAGGGGTTTCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR CCA 90 bp CTCAGGCGTCCTGGCCTAAGGAGGCAGGGCCCCCAAAAGAGCCAGGTCCTGGCAGGATTCAGCAGCAGATaGGATTCCACCCCATCTGTG +
Preference number: 4 (lower is better)
Translates to: LRRPGLRRQGPQKSQVLAGFSSR*DSTPSV
Trigger: CACAGATGGGGTGGAATCCCATCTGCTGCTGAATCC...TGCCAGGACCTGGCTCTTTTGGGGGCCCTGCCTCCTTAGGCCAGGACGCCTGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR CCA 90 bp AATGTGCATAGCCATGGCACGTGCCGTCCCTGTGGATTCGGATGCCTCCTCCCCAGTGTGAAGAGGGGCTaGGGACCCACCACTCCTGAG +
Preference number: 4 (lower is better)
Translates to: NVHSHGTCRPCGFGCLLPSVKRG*GPTTPE
Trigger: CTCAGGAGTGGTGGGTCCCCAGCCCCTCTTCACACT...GGGGAGGAGGCATCCGAATCCACAGGGACGGCACGTGCCATGGCTATGCACATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR CCA 90 bp AGCCAGGGGTGGTCCAATGGCCTGAGACGAGGGGACAGGGCTGGCCTATTAAGAGGTCAAGGACAGGGCTaGGAGAGTGCCAGTCTCCAC +
Preference number: 4 (lower is better)
Translates to: SQGWSNGLRRGDRAGLLRGQGQG*ESASLH
Trigger: GTGGAGACTGGCACTCTCCCAGCCCTGTCCTTGACC...TCTTAATAGGCCAGCCCTGTCCCCTCGTCTCAGGCCATTGGACCACCCCTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR CCA 90 bp TGGACTCTCGGTCAAGGACAGGGCTGGGAGAGTGCCAGTCTCCACAAACTGTGGCACGTGCCGTCCCTGTaGATTCGGATGCCTCCTCCC +
Preference number: 4 (lower is better)
Translates to: WTLGQGQGWESASLHKLWHVPSL*IRMPPP
Trigger: GGGAGGAGGCATCCGAATCCACAGGGACGGCACGTG...CCACAGTTTGTGGAGACTGGCACTCTCCCAGCCCTGTCCTTGACCGAGAGTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR CCA 90 bp AGCCAGGGGTGGTCCAATGGCCTGAGACGAGGGGACAGGGCTGGCCTATTAAGAATGACCTGGCAGTGGTaGTGCCAGTCGGGCATGGAG +
Preference number: 4 (lower is better)
Translates to: SQGWSNGLRRGDRAGLLRMTWQW*CQSGME
Trigger: CTCCATGCCCGACTGGCACCACCACTGCCAGGTCAT...TCTTAATAGGCCAGCCCTGTCCCCTCGTCTCAGGCCATTGGACCACCCCTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620518.5
CDS-3UTR TCA 90 bp CCTGGGGCATCCTCTGCAAGAGGATCCCACGAGAGTCCATTCCCCACCACAGGCACAAGTGCCAGTCTTTaGGGTAGAGACAGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: PGASSARGSHESPFPTTGTSASL*GRDSPW
Trigger: CCAGGGGCTGTCTCTACCTCAAAGACTGGCACTTGT...GCCTGTGGTGGGGAATGGACTCTCGTGGGATCCTCTTGCAGAGGATGCCCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR TCA 90 bp CTAGACAAGTGCCAGCGGCCCCAGTTGATGCCACGGGCAGGCAATGTGCATAGCAGGCCAGCACCTCTGTaGTGCGCCCAACATCAAAGG +
Preference number: 4 (lower is better)
Translates to: LDKCQRPQLMPRAGNVHSRPAPL*CAQHQR
Trigger: CCTTTGATGTTGGGCGCATCACAGAGGTGCTGGCCT...GCTATGCACATTGCCTGCCCGTGGCATCAACTGGGGCCGCTGGCACTTGTCTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR TCA 90 bp CATCCTAGACAAGTGCCAGCGGCCCCAGTTGATGCCACGGGCAGGCAATGTGCAGGGACCCACCACTCCTaGGAACAGCATCCTTGGGAA +
Preference number: 4 (lower is better)
Translates to: HPRQVPAAPVDATGRQCAGTHHS*EQHPWE
Trigger: TTCCCAAGGATGCTGTTCTCAGGAGTGGTGGGTCCC...TGCACATTGCCTGCCCGTGGCATCAACTGGGGCCGCTGGCACTTGTCTAGGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR GCA 90 bp TGGACTCTCGGTCAAGGACAGGGCTGGGAGAGTGCCAGTCTCCACAAACTGTGGATCTCGCCCGCTTCCTaGGTGATCTCCAAGGGTGGG +
Preference number: 4 (lower is better)
Translates to: WTLGQGQGWESASLHKLWISPAS*VISKGG
Trigger: CCCACCCTTGGAGATCACGCAGGAAGCGGGCGAGAT...CCACAGTTTGTGGAGACTGGCACTCTCCCAGCCCTGTCCTTGACCGAGAGTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR GCA 90 bp AGCCAGGGGTGGTCCAATGGCCTGAGACGAGGGGACAGGGCTGGCCTATTAAGATTGTGCACCTGGTGGTaGCAGCCACTGGGCACAAAC +
Preference number: 4 (lower is better)
Translates to: SQGWSNGLRRGDRAGLLRLCTWW*QPLGTN
Trigger: GTTTGTGCCCAGTGGCTGGCACCACCAGGTGCACAA...TCTTAATAGGCCAGCCCTGTCCCCTCGTCTCAGGCCATTGGACCACCCCTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR GCA 90 bp CTAGACAAGTGCCAGCGGCCCCAGTTGATGCCACGGGCAGGCAATGTGCATAGCACGGCGCATAGCTCCTaGTGCAAGAAGCGCCACATG +
Preference number: 4 (lower is better)
Translates to: LDKCQRPQLMPRAGNVHSTAHSS*CKKRHM
Trigger: CATGTGGCGCTTCTTGCAGCAGGAGCTATGCGCCGT...GCTATGCACATTGCCTGCCCGTGGCATCAACTGGGGCCGCTGGCACTTGTCTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR GCA 90 bp TTGATCGGCCTGGACGAGCCCGCCCACACCTCCATCATACCCAGTGTGAAGAGGGCCTCTCTCAGCTGCTaGAGCAGCTCTTTGGGCTGT +
Preference number: 4 (lower is better)
Translates to: LIGLDEPAHTSIIPSVKRASLSC*SSSLGC
Trigger: ACAGCCCAAAGAGCTGCTGCAGCAGCTGAGAGAGGC...CCTCTTCACACTGGGTATGATGGAGGTGTGGGCGGGCTCGTCCAGGCCGATCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR GCA 90 bp AGCCAGGGGTGGTCCAATGGCCTGAGACGAGGGGACAGGGCTGGCCTATTAAGAGCCTCTCTCAGCTGCTaGAGCAGCTCTTTGGGCTGT +
Preference number: 4 (lower is better)
Translates to: SQGWSNGLRRGDRAGLLRASLSC*SSSLGC
Trigger: ACAGCCCAAAGAGCTGCTGCAGCAGCTGAGAGAGGC...TCTTAATAGGCCAGCCCTGTCCCCTCGTCTCAGGCCATTGGACCACCCCTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR GCA 90 bp TCGGTCAAGGACAGGGCTGGGAGAGTGCCAGTCTCCACAAACTGTGGATCCACTAGCTCCCAGCAGGCCTaGTGCAGGTCAGAAGGGCCA +
Preference number: 4 (lower is better)
Translates to: SVKDRAGRVPVSTNCGSTSSQQA*CRSEGP
Trigger: TGGCCCTTCTGACCTGCAGCAGGCCTGCTGGGAGCT...AGTGGATCCACAGTTTGTGGAGACTGGCACTCTCCCAGCCCTGTCCTTGACCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR GCA 90 bp AATGTGCATAGCCATGGCACGTGCCGTCCCTGTGGATTCGGATGCCTCCTCCCCACCACAGGCCTCCGCTaGTCACTGCTGTGCCTTGAT +
Preference number: 4 (lower is better)
Translates to: NVHSHGTCRPCGFGCLLPTTGLR*SLLCLD
Trigger: ATCAAGGCACAGCAGTGAGCAGCGGAGGCCTGTGGT...GGGGAGGAGGCATCCGAATCCACAGGGACGGCACGTGCCATGGCTATGCACATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR GCA 90 bp CTAGACAAGTGCCAGCGGCCCCAGTTGATGCCACGGGCAGGCAATGTGCATAGCCATAGCCATGGCACGTaGCGTCCCTGTGGATTCGGA +
Preference number: 4 (lower is better)
Translates to: LDKCQRPQLMPRAGNVHSHSHGT*RPCGFG
Trigger: TCCGAATCCACAGGGACGGCACGTGCCATGGCTATG...GCTATGCACATTGCCTGCCCGTGGCATCAACTGGGGCCGCTGGCACTTGTCTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR GCA 90 bp AGCAGACAGAAACCCCTGCCCTTCTTGGGGGCTTCCATCCTAGACAAGTGCCAGTCGCTGACCTCCTCCTaGACGGCGCATAGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: SRQKPLPFLGASILDKCQSLTSS*TAHSSC
Trigger: GCAGGAGCTATGCGCCGTGCAGGAGGAGGTCAGCGA...CTGGCACTTGTCTAGGATGGAAGCCCCCAAGAAGGGCAGGGGTTTCTGTCTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000620518.5
CDS-3UTR CCA 90 bp CTCAGGCGTCCTGGCCTAAGGAGGCAGGGCCCCCAAAAGAGCCAGGTCCTGGCACCCACAGTTTGCAACTaGTACAACCACGTCTCCGTA +
Preference number: 4 (lower is better)
Translates to: LRRPGLRRQGPQKSQVLAPTVCN*YNHVSV
Trigger: TACGGAGACGTGGTTGTACCAGTTGCAAACTGTGGG...TGCCAGGACCTGGCTCTTTTGGGGGCCCTGCCTCCTTAGGCCAGGACGCCTGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR CCA 90 bp AGCAGACAGAAACCCCTGCCCTTCTTGGGGGCTTCCATCCTAGACAAGTGCCAGGGCCTCTTCCTGCCCTaGGGGGAAGAGGAGCCACTT +
Preference number: 4 (lower is better)
Translates to: SRQKPLPFLGASILDKCQGLFLP*GEEEPL
Trigger: AAGTGGCTCCTCTTCCCCCCAGGGCAGGAAGAGGCC...CTGGCACTTGTCTAGGATGGAAGCCCCCAAGAAGGGCAGGGGTTTCTGTCTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR CCA 90 bp AGCCAGGGGTGGTCCAATGGCCTGAGACGAGGGGACAGGGCTGGCCTATTAAGAAGCAAGCTGGTTCCGTaGGTGCAGGTGTGTGTCGCA +
Preference number: 4 (lower is better)
Translates to: SQGWSNGLRRGDRAGLLRSKLVP*VQVCVA
Trigger: TGCGACACACACCTGCACCCACGGAACCAGCTTGCT...TCTTAATAGGCCAGCCCTGTCCCCTCGTCTCAGGCCATTGGACCACCCCTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR CCA 90 bp AGCAGACAGAAACCCCTGCCCTTCTTGGGGGCTTCCATCCTAGACAAGTGCCAGGGTGGGCCAGCAAGCTaGTTCCGTGGGTGCAGGTGT +
Preference number: 4 (lower is better)
Translates to: SRQKPLPFLGASILDKCQGGPAS*FRGCRC
Trigger: ACACCTGCACCCACGGAACCAGCTTGCTGGCCCACC...CTGGCACTTGTCTAGGATGGAAGCCCCCAAGAAGGGCAGGGGTTTCTGTCTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR CCA 90 bp CATCCTAGACAAGTGCCAGCGGCCCCAGTTGATGCCACGGGCAGGCAATGTGCATCACGACAGGTGCTATaGGGCCGCAGCAGCATCAAC +
Preference number: 4 (lower is better)
Translates to: HPRQVPAAPVDATGRQCASRQVL*GRSSIN
Trigger: GTTGATGCTGCTGCGGCCCCATAGCACCTGTCGTGA...TGCACATTGCCTGCCCGTGGCATCAACTGGGGCCGCTGGCACTTGTCTAGGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR CCA 90 bp CTAGACAAGTGCCAGCGGCCCCAGTTGATGCCACGGGCAGGCAATGTGCATAGCGGCCACATCCCATCTTaGGTCCCTGACCTCATTGGG +
Preference number: 4 (lower is better)
Translates to: LDKCQRPQLMPRAGNVHSGHIPS*VPDLIG
Trigger: CCCAATGAGGTCAGGGACCCAAGATGGGATGTGGCC...GCTATGCACATTGCCTGCCCGTGGCATCAACTGGGGCCGCTGGCACTTGTCTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR CCA 90 bp TTGATCGGCCTGGACGAGCCCGCCCACACCTCCATCATACCCAGTGTGAAGAGGAAAAGAGCCAGGTCCTaGCACCATCTCCGAGCTCCC +
Preference number: 4 (lower is better)
Translates to: LIGLDEPAHTSIIPSVKRKRARS*HHLRAP
Trigger: GGGAGCTCGGAGATGGTGCCAGGACCTGGCTCTTTT...CCTCTTCACACTGGGTATGATGGAGGTGTGGGCGGGCTCGTCCAGGCCGATCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR CCA 90 bp TTGATCGGCCTGGACGAGCCCGCCCACACCTCCATCATACCCAGTGTGAAGAGGGACCTCATGATGACCTaGCAGTGGTGGTGCCAGTCG +
Preference number: 4 (lower is better)
Translates to: LIGLDEPAHTSIIPSVKRDLMMT*QWWCQS
Trigger: CGACTGGCACCACCACTGCCAGGTCATCATGAGGTC...CCTCTTCACACTGGGTATGATGGAGGTGTGGGCGGGCTCGTCCAGGCCGATCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620518.5
CDS-3UTR TCA 90 bp CTAGACAAGTGCCAGCGGCCCCAGTTGATGCCACGGGCAGGCAATGTGCATAGCACAAGTGCCAGTCTTTaGGGTAGAGACAGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: LDKCQRPQLMPRAGNVHSTSASL*GRDSPW
Trigger: CCAGGGGCTGTCTCTACCTCAAAGACTGGCACTTGT...GCTATGCACATTGCCTGCCCGTGGCATCAACTGGGGCCGCTGGCACTTGTCTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR TCA 90 bp AGCCAGGGGTGGTCCAATGGCCTGAGACGAGGGGACAGGGCTGGCCTATTAAGAAGTACACAGGCAGGGTaGAAACGTCCTCCACCGGAA +
Preference number: 4 (lower is better)
Translates to: SQGWSNGLRRGDRAGLLRSTQAG*KRPPPE
Trigger: TTCCGGTGGAGGACGTTTTCACCCTGCCTGTGTACT...TCTTAATAGGCCAGCCCTGTCCCCTCGTCTCAGGCCATTGGACCACCCCTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR TCA 90 bp TCGGTCAAGGACAGGGCTGGGAGAGTGCCAGTCTCCACAAACTGTGGATCCACTCCATCATACCCAGTGTaGAGAGGGGCTGGGGACCCA +
Preference number: 4 (lower is better)
Translates to: SVKDRAGRVPVSTNCGSTPSYPV*RGAGDP
Trigger: TGGGTCCCCAGCCCCTCTTCACACTGGGTATGATGG...AGTGGATCCACAGTTTGTGGAGACTGGCACTCTCCCAGCCCTGTCCTTGACCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR GCA 90 bp CTAGACAAGTGCCAGCGGCCCCAGTTGATGCCACGGGCAGGCAATGTGCATAGCGCGCATAGCTCCTGCTaGAAGAAGCGCCACATGTTG +
Preference number: 4 (lower is better)
Translates to: LDKCQRPQLMPRAGNVHSAHSSC*KKRHML
Trigger: CAACATGTGGCGCTTCTTGCAGCAGGAGCTATGCGC...GCTATGCACATTGCCTGCCCGTGGCATCAACTGGGGCCGCTGGCACTTGTCTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR GCA 90 bp AGGCACACCAGACACAGACTCCTGTCAGCTCAGGCGTCCTGGCCTAAGGAGGCAGCGCATAGCTCCTGCTaGAAGAAGCGCCACATGTTG +
Preference number: 4 (lower is better)
Translates to: RHTRHRLLSAQASWPKEAAHSSC*KKRHML
Trigger: CAACATGTGGCGCTTCTTGCAGCAGGAGCTATGCGC...TGCCTCCTTAGGCCAGGACGCCTGAGCTGACAGGAGTCTGTGTCTGGTGTGCCT
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR GCA 90 bp GGCCTATTAAGAGGAGCCACCAGAGAAGGCACACCAGACACAGACTCCTGTCAGGCCTCCGCTGCTCACTaGTGTGCCTTGATCGGCCTG +
Preference number: 4 (lower is better)
Translates to: GLLRGATREGTPDTDSCQASAAH*CALIGL
Trigger: CAGGCCGATCAAGGCACAGCAGTGAGCAGCGGAGGC...CTGACAGGAGTCTGTGTCTGGTGTGCCTTCTCTGGTGGCTCCTCTTAATAGGCC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR GCA 90 bp AATGTGCATAGCCATGGCACGTGCCGTCCCTGTGGATTCGGATGCCTCCTCCCCACAGGGCTGGGAGAGTaGCAGTCTCCACAAACTGTG +
Preference number: 4 (lower is better)
Translates to: NVHSHGTCRPCGFGCLLPTGLGE*QSPQTV
Trigger: CACAGTTTGTGGAGACTGGCACTCTCCCAGCCCTGT...GGGGAGGAGGCATCCGAATCCACAGGGACGGCACGTGCCATGGCTATGCACATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR GCA 90 bp TGGACTCTCGGTCAAGGACAGGGCTGGGAGAGTGCCAGTCTCCACAAACTGTGGCATAGCCATGGCACGTaGCGTCCCTGTGGATTCGGA +
Preference number: 4 (lower is better)
Translates to: WTLGQGQGWESASLHKLWHSHGT*RPCGFG
Trigger: TCCGAATCCACAGGGACGGCACGTGCCATGGCTATG...CCACAGTTTGTGGAGACTGGCACTCTCCCAGCCCTGTCCTTGACCGAGAGTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR GCA 90 bp CTAGACAAGTGCCAGCGGCCCCAGTTGATGCCACGGGCAGGCAATGTGCATAGCTCCATCCTAGACAAGTaGCAGCGGCCCCAGTTGATG +
Preference number: 4 (lower is better)
Translates to: LDKCQRPQLMPRAGNVHSSILDK*QRPQLM
Trigger: CATCAACTGGGGCCGCTGGCACTTGTCTAGGATGGA...GCTATGCACATTGCCTGCCCGTGGCATCAACTGGGGCCGCTGGCACTTGTCTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR CCA 90 bp GGCCGCTGGTTCCACAGCCCATCACCTGGAGGTGATGGAGGCCAACCCCAGCCCTTCGAGTTGTATTCCTaGACCCCACAGTTTGCAACT +
Preference number: 4 (lower is better)
Translates to: GRWFHSPSPGGDGGQPQPFELYS*TPQFAT
Trigger: AGTTGCAAACTGTGGGGTCCAGGAATACAACTCGAA...GGGCTGGGGTTGGCCTCCATCACCTCCAGGTGATGGGCTGTGGAACCAGCGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR CCA 90 bp AGCAGACAGAAACCCCTGCCCTTCTTGGGGGCTTCCATCCTAGACAAGTGCCAGTGTGTCGCAGAGTGCTaGGGAGGTCACGTCGTAGGG +
Preference number: 4 (lower is better)
Translates to: SRQKPLPFLGASILDKCQCVAEC*GGHVVG
Trigger: CCCTACGACGTGACCTCCCCAGCACTCTGCGACACA...CTGGCACTTGTCTAGGATGGAAGCCCCCAAGAAGGGCAGGGGTTTCTGTCTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR CCA 90 bp AGCAGACAGAAACCCCTGCCCTTCTTGGGGGCTTCCATCCTAGACAAGTGCCAGGCTGCAGCAGCTCTTTaGGCTGTGGTGAGAACGCGC +
Preference number: 4 (lower is better)
Translates to: SRQKPLPFLGASILDKCQAAAAL*AVVRTR
Trigger: GCGCGTTCTCACCACAGCCCAAAGAGCTGCTGCAGC...CTGGCACTTGTCTAGGATGGAAGCCCCCAAGAAGGGCAGGGGTTTCTGTCTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR CCA 90 bp TGGACTCTCGGTCAAGGACAGGGCTGGGAGAGTGCCAGTCTCCACAAACTGTGGTCACGACAGGTGCTATaGGGCCGCAGCAGCATCAAC +
Preference number: 4 (lower is better)
Translates to: WTLGQGQGWESASLHKLWSRQVL*GRSSIN
Trigger: GTTGATGCTGCTGCGGCCCCATAGCACCTGTCGTGA...CCACAGTTTGTGGAGACTGGCACTCTCCCAGCCCTGTCCTTGACCGAGAGTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR CCA 90 bp AATGTGCATAGCCATGGCACGTGCCGTCCCTGTGGATTCGGATGCCTCCTCCCCATTCCACCCCATCTGTaGCCTCTCCAGCTGTCCACA +
Preference number: 4 (lower is better)
Translates to: NVHSHGTCRPCGFGCLLPIPPHL*PLQLST
Trigger: TGTGGACAGCTGGAGAGGCCACAGATGGGGTGGAAT...GGGGAGGAGGCATCCGAATCCACAGGGACGGCACGTGCCATGGCTATGCACATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR TCA 90 bp GGCCTATTAAGAGGAGCCACCAGAGAAGGCACACCAGACACAGACTCCTGTCAGCCCATCTTGGGTCCCTaGCCTCATTGGGCCTCACCT +
Preference number: 4 (lower is better)
Translates to: GLLRGATREGTPDTDSCQPILGP*PHWASP
Trigger: AGGTGAGGCCCAATGAGGTCAGGGACCCAAGATGGG...CTGACAGGAGTCTGTGTCTGGTGTGCCTTCTCTGGTGGCTCCTCTTAATAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR TCA 90 bp AATGTGCATAGCCATGGCACGTGCCGTCCCTGTGGATTCGGATGCCTCCTCCCCCAACCAGGGGCCAACTaGAAAAATGCTGGACTCTCG +
Preference number: 4 (lower is better)
Translates to: NVHSHGTCRPCGFGCLLPQPGAN*KNAGLS
Trigger: CGAGAGTCCAGCATTTTTTCAGTTGGCCCCTGGTTG...GGGGAGGAGGCATCCGAATCCACAGGGACGGCACGTGCCATGGCTATGCACATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR TCA 90 bp CATCCTAGACAAGTGCCAGCGGCCCCAGTTGATGCCACGGGCAGGCAATGTGCACAACCAGGGGCCAACTaGAAAAATGCTGGACTCTCG +
Preference number: 4 (lower is better)
Translates to: HPRQVPAAPVDATGRQCAQPGAN*KNAGLS
Trigger: CGAGAGTCCAGCATTTTTTCAGTTGGCCCCTGGTTG...TGCACATTGCCTGCCCGTGGCATCAACTGGGGCCGCTGGCACTTGTCTAGGATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR TCA 90 bp GCTGCTCACTGCTGTGCCTTGATCGGCCTGGACGAGCCCGCCCACACCTCCATCTGCAAGCACTTCACATaGTTCACTGAACAGAGCAGA +
Preference number: 4 (lower is better)
Translates to: AAHCCALIGLDEPAHTSICKHFT*FTEQSR
Trigger: TCTGCTCTGTTCAGTGAATCATGTGAAGTGCTTGCA...GATGGAGGTGTGGGCGGGCTCGTCCAGGCCGATCAAGGCACAGCAGTGAGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR GCA 90 bp CATCCTAGACAAGTGCCAGCGGCCCCAGTTGATGCCACGGGCAGGCAATGTGCACTGGACCCCACAGTTTaGAACTGGTACAACCACGTC +
Preference number: 4 (lower is better)
Translates to: HPRQVPAAPVDATGRQCALDPTV*NWYNHV
Trigger: GACGTGGTTGTACCAGTTGCAAACTGTGGGGTCCAG...TGCACATTGCCTGCCCGTGGCATCAACTGGGGCCGCTGGCACTTGTCTAGGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR GCA 90 bp TCGGTCAAGGACAGGGCTGGGAGAGTGCCAGTCTCCACAAACTGTGGATCCACTAGCTGGTTCCGTGGGTaGAGGTGTGTGTCGCAGAGT +
Preference number: 4 (lower is better)
Translates to: SVKDRAGRVPVSTNCGSTSWFRG*RCVSQS
Trigger: ACTCTGCGACACACACCTGCACCCACGGAACCAGCT...AGTGGATCCACAGTTTGTGGAGACTGGCACTCTCCCAGCCCTGTCCTTGACCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR GCA 90 bp AGCAGACAGAAACCCCTGCCCTTCTTGGGGGCTTCCATCCTAGACAAGTGCCAGGTGTCATCCAGGTTGTaGACCTGGTGGTGCCAGCCA +
Preference number: 4 (lower is better)
Translates to: SRQKPLPFLGASILDKCQVSSRL*TWWCQP
Trigger: TGGCTGGCACCACCAGGTGCACAACCTGGATGACAC...CTGGCACTTGTCTAGGATGGAAGCCCCCAAGAAGGGCAGGGGTTTCTGTCTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR GCA 90 bp ACAGAAACCCCTGCCCTTCTTGGGGGCTTCCATCCTAGACAAGTGCCAGCGGCCCCCAACATCAAAGGCTaGCTGTTCGAAACCCAACCC +
Preference number: 4 (lower is better)
Translates to: TETPALLGGFHPRQVPAAPNIKG*LFETQP
Trigger: GGGTTGGGTTTCGAACAGGCAGCCTTTGATGTTGGG...GGCCGCTGGCACTTGTCTAGGATGGAAGCCCCCAAGAAGGGCAGGGGTTTCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR GCA 90 bp AGCAGACAGAAACCCCTGCCCTTCTTGGGGGCTTCCATCCTAGACAAGTGCCAGGCAGACAGAAACCCCTaGCCTTCTTGGGGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: SRQKPLPFLGASILDKCQADRNP*PSWGLP
Trigger: TGGAAGCCCCCAAGAAGGGCAGGGGTTTCTGTCTGC...CTGGCACTTGTCTAGGATGGAAGCCCCCAAGAAGGGCAGGGGTTTCTGTCTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR CCA 90 bp CCTGGGGCATCCTCTGCAAGAGGATCCCACGAGAGTCCATTCCCCACCACAGGCCCCACAGTTTGCAACTaGTACAACCACGTCTCCGTA +
Preference number: 4 (lower is better)
Translates to: PGASSARGSHESPFPTTGPTVCN*YNHVSV
Trigger: TACGGAGACGTGGTTGTACCAGTTGCAAACTGTGGG...GCCTGTGGTGGGGAATGGACTCTCGTGGGATCCTCTTGCAGAGGATGCCCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR CCA 90 bp GGCCTATTAAGAGGAGCCACCAGAGAAGGCACACCAGACACAGACTCCTGTCAGGGTGGTGCCAGCCACTaGGCACAAACACCATCTCGC +
Preference number: 4 (lower is better)
Translates to: GLLRGATREGTPDTDSCQGGASH*AQTPSR
Trigger: GCGAGATGGTGTTTGTGCCCAGTGGCTGGCACCACC...CTGACAGGAGTCTGTGTCTGGTGTGCCTTCTCTGGTGGCTCCTCTTAATAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR CCA 90 bp TCGGTCAAGGACAGGGCTGGGAGAGTGCCAGTCTCCACAAACTGTGGATCCACTAAAAGAGCCAGGTCCTaGCACCATCTCCGAGCTCCC +
Preference number: 4 (lower is better)
Translates to: SVKDRAGRVPVSTNCGSTKRARS*HHLRAP
Trigger: GGGAGCTCGGAGATGGTGCCAGGACCTGGCTCTTTT...AGTGGATCCACAGTTTGTGGAGACTGGCACTCTCCCAGCCCTGTCCTTGACCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR CCA 90 bp TCGGTCAAGGACAGGGCTGGGAGAGTGCCAGTCTCCACAAACTGTGGATCCACTACGAGGGGACAGGGCTaGCCTATTAAGAGGAGCCAC +
Preference number: 4 (lower is better)
Translates to: SVKDRAGRVPVSTNCGSTTRGQG*PIKRSH
Trigger: GTGGCTCCTCTTAATAGGCCAGCCCTGTCCCCTCGT...AGTGGATCCACAGTTTGTGGAGACTGGCACTCTCCCAGCCCTGTCCTTGACCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR CCA 90 bp TGGACTCTCGGTCAAGGACAGGGCTGGGAGAGTGCCAGTCTCCACAAACTGTGGATTCCACCCCATCTGTaGCCTCTCCAGCTGTCCACA +
Preference number: 4 (lower is better)
Translates to: WTLGQGQGWESASLHKLWIPPHL*PLQLST
Trigger: TGTGGACAGCTGGAGAGGCCACAGATGGGGTGGAAT...CCACAGTTTGTGGAGACTGGCACTCTCCCAGCCCTGTCCTTGACCGAGAGTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR GCA 90 bp GGCCTATTAAGAGGAGCCACCAGAGAAGGCACACCAGACACAGACTCCTGTCAGAGCTGGTTCCGTGGGTaGAGGTGTGTGTCGCAGAGT +
Preference number: 4 (lower is better)
Translates to: GLLRGATREGTPDTDSCQSWFRG*RCVSQS
Trigger: ACTCTGCGACACACACCTGCACCCACGGAACCAGCT...CTGACAGGAGTCTGTGTCTGGTGTGCCTTCTCTGGTGGCTCCTCTTAATAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR GCA 90 bp GGCCTATTAAGAGGAGCCACCAGAGAAGGCACACCAGACACAGACTCCTGTCAGGTGTCATCCAGGTTGTaGACCTGGTGGTGCCAGCCA +
Preference number: 4 (lower is better)
Translates to: GLLRGATREGTPDTDSCQVSSRL*TWWCQP
Trigger: TGGCTGGCACCACCAGGTGCACAACCTGGATGACAC...CTGACAGGAGTCTGTGTCTGGTGTGCCTTCTCTGGTGGCTCCTCTTAATAGGCC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR GCA 90 bp TGGACTCTCGGTCAAGGACAGGGCTGGGAGAGTGCCAGTCTCCACAAACTGTGGCCCAACATCAAAGGCTaGCTGTTCGAAACCCAACCC +
Preference number: 4 (lower is better)
Translates to: WTLGQGQGWESASLHKLWPNIKG*LFETQP
Trigger: GGGTTGGGTTTCGAACAGGCAGCCTTTGATGTTGGG...CCACAGTTTGTGGAGACTGGCACTCTCCCAGCCCTGTCCTTGACCGAGAGTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR GCA 90 bp GGCCTATTAAGAGGAGCCACCAGAGAAGGCACACCAGACACAGACTCCTGTCAGTATCCTCACGACAGGTaGTATGGGGCCGCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: GLLRGATREGTPDTDSCQYPHDR*YGAAAA
Trigger: TGCTGCTGCGGCCCCATAGCACCTGTCGTGAGGATA...CTGACAGGAGTCTGTGTCTGGTGTGCCTTCTCTGGTGGCTCCTCTTAATAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR GCA 90 bp GGCCTATTAAGAGGAGCCACCAGAGAAGGCACACCAGACACAGACTCCTGTCAGACCACAGGCCTCCGCTaGTCACTGCTGTGCCTTGAT +
Preference number: 4 (lower is better)
Translates to: GLLRGATREGTPDTDSCQTTGLR*SLLCLD
Trigger: ATCAAGGCACAGCAGTGAGCAGCGGAGGCCTGTGGT...CTGACAGGAGTCTGTGTCTGGTGTGCCTTCTCTGGTGGCTCCTCTTAATAGGCC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR GCA 90 bp GGCCTATTAAGAGGAGCCACCAGAGAAGGCACACCAGACACAGACTCCTGTCAGGCAGACAGAAACCCCTaGCCTTCTTGGGGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: GLLRGATREGTPDTDSCQADRNP*PSWGLP
Trigger: TGGAAGCCCCCAAGAAGGGCAGGGGTTTCTGTCTGC...CTGACAGGAGTCTGTGTCTGGTGTGCCTTCTCTGGTGGCTCCTCTTAATAGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR GCA 90 bp TCGGTCAAGGACAGGGCTGGGAGAGTGCCAGTCTCCACAAACTGTGGATCCACTCTGGACCCCACAGTTTaGAACTGGTACAACCACGTC +
Preference number: 4 (lower is better)
Translates to: SVKDRAGRVPVSTNCGSTLDPTV*NWYNHV
Trigger: GACGTGGTTGTACCAGTTGCAAACTGTGGGGTCCAG...AGTGGATCCACAGTTTGTGGAGACTGGCACTCTCCCAGCCCTGTCCTTGACCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR CCA 90 bp CCTGGGGCATCCTCTGCAAGAGGATCCCACGAGAGTCCATTCCCCACCACAGGCGAGTCATGTGCTCTTTaGGGTTCGAGTTGTATTCCT +
Preference number: 4 (lower is better)
Translates to: PGASSARGSHESPFPTTGESCAL*GSSCIP
Trigger: AGGAATACAACTCGAACCCCAAAGAGCACATGACTC...GCCTGTGGTGGGGAATGGACTCTCGTGGGATCCTCTTGCAGAGGATGCCCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR CCA 90 bp AGCCAGGGGTGGTCCAATGGCCTGAGACGAGGGGACAGGGCTGGCCTATTAAGACCATTGACCCAGTTGTaGTTGATGGAGATGGTGTCA +
Preference number: 4 (lower is better)
Translates to: SQGWSNGLRRGDRAGLLRPLTQL*LMEMVS
Trigger: TGACACCATCTCCATCAACCACAACTGGGTCAATGG...TCTTAATAGGCCAGCCCTGTCCCCTCGTCTCAGGCCATTGGACCACCCCTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR TCA 90 bp ATTCGACAGACACATATGAAGCACCTACTGTGTAAAGCTGCCTTTGCAAGCACTGCCAGCGGCCCCAGTTaGTGCCACGGGCAGGCAATG +
Preference number: 4 (lower is better)
Translates to: IRQTHMKHLLCKAAFASTASGPS*CHGQAM
Trigger: CATTGCCTGCCCGTGGCATCAACTGGGGCCGCTGGC...AGTGCTTGCAAAGGCAGCTTTACACAGTAGGTGCTTCATATGTGTCTGTCGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620518.5
CDS-3UTR TCA 90 bp CATCCTAGACAAGTGCCAGCGGCCCCAGTTGATGCCACGGGCAGGCAATGTGCATGCAAGCACTTCACATaGTTCACTGAACAGAGCAGA +
Preference number: 4 (lower is better)
Translates to: HPRQVPAAPVDATGRQCACKHFT*FTEQSR
Trigger: TCTGCTCTGTTCAGTGAATCATGTGAAGTGCTTGCA...TGCACATTGCCTGCCCGTGGCATCAACTGGGGCCGCTGGCACTTGTCTAGGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR CCA 90 bp AATGTGCATAGCCATGGCACGTGCCGTCCCTGTGGATTCGGATGCCTCCTCCCCGAGTCATGTGCTCTTTaGGGTTCGAGTTGTATTCCT +
Preference number: 4 (lower is better)
Translates to: NVHSHGTCRPCGFGCLLPESCAL*GSSCIP
Trigger: AGGAATACAACTCGAACCCCAAAGAGCACATGACTC...GGGGAGGAGGCATCCGAATCCACAGGGACGGCACGTGCCATGGCTATGCACATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR TCA 90 bp CATCCTAGACAAGTGCCAGCGGCCCCAGTTGATGCCACGGGCAGGCAATGTGCATTCGACAGACACATATaGAGCACCTACTGTGTAAAG +
Preference number: 4 (lower is better)
Translates to: HPRQVPAAPVDATGRQCAFDRHI*STYCVK
Trigger: CTTTACACAGTAGGTGCTTCATATGTGTCTGTCGAA...TGCACATTGCCTGCCCGTGGCATCAACTGGGGCCGCTGGCACTTGTCTAGGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620518.5
CDS-3UTR CCA 90 bp GGCCTATTAAGAGGAGCCACCAGAGAAGGCACACCAGACACAGACTCCTGTCAGCCATTGACCCAGTTGTaGTTGATGGAGATGGTGTCA +
Preference number: 4 (lower is better)
Translates to: GLLRGATREGTPDTDSCQPLTQL*LMEMVS
Trigger: TGACACCATCTCCATCAACCACAACTGGGTCAATGG...CTGACAGGAGTCTGTGTCTGGTGTGCCTTCTCTGGTGGCTCCTCTTAATAGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR CCA 90 bp ATTCGACAGACACATATGAAGCACCTACTGTGTAAAGCTGCCTTTGCAAGCACTCTGGTGTCCACTCTCTaGAAGTCGGGGTGCGCAACC +
Preference number: 4 (lower is better)
Translates to: IRQTHMKHLLCKAAFASTLVSTL*KSGCAT
Trigger: GGTTGCGCACCCCGACTTCCAGAGAGTGGACACCAG...AGTGCTTGCAAAGGCAGCTTTACACAGTAGGTGCTTCATATGTGTCTGTCGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620518.5
CDS-3UTR GCA 90 bp ATTCGACAGACACATATGAAGCACCTACTGTGTAAAGCTGCCTTTGCAAGCACTTCCATCCTAGACAAGTaGCAGCGGCCCCAGTTGATG +
Preference number: 4 (lower is better)
Translates to: IRQTHMKHLLCKAAFASTSILDK*QRPQLM
Trigger: CATCAACTGGGGCCGCTGGCACTTGTCTAGGATGGA...AGTGCTTGCAAAGGCAGCTTTACACAGTAGGTGCTTCATATGTGTCTGTCGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620518.5
CDS CCA 90 bp GGAGCCTGGCCGACGCCGGGGACATCGACCCCCAGGCCTCGGAAGTaGCTGTCGGCGAGGGCGCGCGTCTCGCGGTCCATCCAGCTCAGC +
Preference number: 5 (lower is better)
Translates to: GAWPTPGTSTPRPRK*LSARARVSRSIQLS
Trigger: GCTGAGCTGGATGGACCGCGAGACGCGCGCCCTCGCCGACAGCCACTTCCGAGGCCTGGGGGTCGATGTCCCCGGCGTCGGCCAGGCTCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS CCA 90 bp GAGAAGGCGCCCGGCTCCGAGACGAAGGCTACCCGGCCCGGAGCCTaGCCGACGCCGGGGACATCGACCCCCAGGCCTCGGAAGTGGCTG +
Preference number: 5 (lower is better)
Translates to: EKAPGSETKATRPGA*PTPGTSTPRPRKWL
Trigger: CAGCCACTTCCGAGGCCTGGGGGTCGATGTCCCCGGCGTCGGCCAGGCTCCGGGCCGGGTAGCCTTCGTCTCGGAGCCGGGCGCCTTCTC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS CCA 90 bp GCCAGCAAGCTGGTTCCGTGGGTGCAGGTGTGTGTCGCAGAGTGCTaGGGAGGTCACGTCGTAGGGCAGGTTGCCGTGGCGGTCCCGCAG +
Preference number: 5 (lower is better)
Translates to: ASKLVPWVQVCVAEC*GGHVVGQVAVAVPQ
Trigger: CTGCGGGACCGCCACGGCAACCTGCCCTACGACGTGACCTCCCCAGCACTCTGCGACACACACCTGCACCCACGGAACCAGCTTGCTGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000438896.3
ENST00000480590.1
ENST00000485807.1
ENST00000620518.5
CDS TCA 90 bp CGGGTCGAAGGACCCTCCTCCTCACTTCCGCCGGAGCGGAAACGGTaGGGACCAGCCTCGGAACCAGAAGACGCAGGGCGCCGCGTTTCT +
Preference number: 5 (lower is better)
Translates to: RVEGPSSSLPPERKR*GPASEPEDAGRRVS
Trigger: AGAAACGCGGCGCCCTGCGTCTTCTGGTTCCGAGGCTGGTCCTCACCGTTTCCGCTCCGGCGGAAGTGAGGAGGAGGGTCCTTCGACCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438896.3
CDS TCA 90 bp CCTGGCAGTGGTGGTGCCAGTCGGGCATGGAGTCCCTCCACTCGCTaGCCTCCTCCTGCACGGCGCATAGCTCCTGCTGCAAGAAGCGCC +
Preference number: 5 (lower is better)
Translates to: PGSGGASRAWSPSTR*PPPARRIAPAARSA
Trigger: GGCGCTTCTTGCAGCAGGAGCTATGCGCCGTGCAGGAGGAGGTCAGCGAGTGGAGGGACTCCATGCCCGACTGGCACCACCACTGCCAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485807.1
ENST00000620518.5
CDS GCA 90 bp GGTGAGCCACGCCCACACTCAGCCTGGGCCTGGTCCTGGCAAGGCTaGAGCCGTGCATGTTTGCTACCTCCCCCTCCTCCCCGACAAAGC +
Preference number: 5 (lower is better)
Translates to: GEPRPHSAWAWSWQG*SRACLLPPPPPRQS
Trigger: GCTTTGTCGGGGAGGAGGGGGAGGTAGCAAACATGCACGGCTGCAGCCTTGCCAGGACCAGGCCCAGGCTGAGTGTGGGCGTGGCTCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485807.1
CDS GCA 90 bp GGAGCGCAGGACCAAGCAGCCTGGATGGTAATGGGCTGCGACCTGTaGTACCTTGTGCTGCCAGTTCGCACTGGGCCCTGGCTGCCCTGG +
Preference number: 5 (lower is better)
Translates to: GAQDQAAWMVMGCDL*YLVLPVRTGPWLPW
Trigger: CCAGGGCAGCCAGGGCCCAGTGCGAACTGGCAGCACAAGGTAGCACAGGTCGCAGCCCATTACCATCCAGGCTGCTTGGTCCTGCGCTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485807.1
CDS TCA 90 bp TGCCAAGAGGCCCAAGCTCAGAGGTTACCGGAGGGGCTAAATGGGTaGGCCACGCCCACACTCAGCCTGGGCCTGGTCCTGGCAAGGCTG +
Preference number: 5 (lower is better)
Translates to: CQEAQAQRLPEGLNG*ATPTLSLGLVLARL
Trigger: CAGCCTTGCCAGGACCAGGCCCAGGCTGAGTGTGGGCGTGGCTCACCCATTTAGCCCCTCCGGTAACCTCTGAGCTTGGGCCTCTTGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485807.1
CDS GCA 90 bp TGGTGGTGCCAGCCACTGGGCACAAACACCATCTCGCCCGCTTCCTaGGTGATCTCCAAGGGTGGGCCAGCAAGCTGGTTCCGTGGGTGC +
Preference number: 5 (lower is better)
Translates to: WWCQPLGTNTISPAS*VISKGGPASWFRGC
Trigger: GCACCCACGGAACCAGCTTGCTGGCCCACCCTTGGAGATCACGCAGGAAGCGGGCGAGATGGTGTTTGTGCCCAGTGGCTGGCACCACCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000438896.3
ENST00000480590.1
ENST00000485807.1
ENST00000620518.5
CDS GCA 90 bp TGGTGCCAGTCGGGCATGGAGTCCCTCCACTCGCTGACCTCCTCCTaGACGGCGCATAGCTCCTGCTGCAAGAAGCGCCACATGTTGGCC +
Preference number: 5 (lower is better)
Translates to: WCQSGMESLHSLTSS*TAHSSCCKKRHMLA
Trigger: GGCCAACATGTGGCGCTTCTTGCAGCAGGAGCTATGCGCCGTGCAGGAGGAGGTCAGCGAGTGGAGGGACTCCATGCCCGACTGGCACCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485807.1
ENST00000620518.5
CDS GCA 90 bp ACGCCCACACTCAGCCTGGGCCTGGTCCTGGCAAGGCTGCAGCCGTaGATGTTTGCTACCTCCCCCTCCTCCCCGACAAAGCACCTTTGC +
Preference number: 5 (lower is better)
Translates to: TPTLSLGLVLARLQP*MFATSPSSPTKHLC
Trigger: GCAAAGGTGCTTTGTCGGGGAGGAGGGGGAGGTAGCAAACATGCACGGCTGCAGCCTTGCCAGGACCAGGCCCAGGCTGAGTGTGGGCGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485807.1
CDS CCA 90 bp AGGGTGCCAAGAGGCCCAAGCTCAGAGGTTACCGGAGGGGCTAAATaGGTGAGCCACGCCCACACTCAGCCTGGGCCTGGTCCTGGCAAG +
Preference number: 5 (lower is better)
Translates to: RVPRGPSSEVTGGAK*VSHAHTQPGPGPGK
Trigger: CTTGCCAGGACCAGGCCCAGGCTGAGTGTGGGCGTGGCTCACCCATTTAGCCCCTCCGGTAACCTCTGAGCTTGGGCCTCTTGGCACCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485807.1
CDS CCA 90 bp CGCTTCCTGCGTGATCTCCAAGGGTGGGCCAGCAAGCTGGTTCCGTaGGTGCAGGTGTGTGTCGCAGAGTGCTGGGGAGGTCACGTCGTA +
Preference number: 5 (lower is better)
Translates to: RFLRDLQGWASKLVP*VQVCVAECWGGHVV
Trigger: TACGACGTGACCTCCCCAGCACTCTGCGACACACACCTGCACCCACGGAACCAGCTTGCTGGCCCACCCTTGGAGATCACGCAGGAAGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000438896.3
ENST00000480590.1
ENST00000485807.1
ENST00000620518.5
CDS-3UTR CAA 90 bp AGCCAGGGGTGGTCCAATGGCCTGAGACGAGGGGACAGGGCTGGCCTATTAAGATGCCAGCGGCCCCAGTaGATGCCACGGGCAGGCAAT +
Preference number: 5 (lower is better)
Translates to: SQGWSNGLRRGDRAGLLRCQRPQ*MPRAGN
Trigger: ATTGCCTGCCCGTGGCATCAACTGGGGCCGCTGGCA...TCTTAATAGGCCAGCCCTGTCCCCTCGTCTCAGGCCATTGGACCACCCCTGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR CAA 90 bp CTAGACAAGTGCCAGCGGCCCCAGTTGATGCCACGGGCAGGCAATGTGCATAGCTGCCAGCGGCCCCAGTaGATGCCACGGGCAGGCAAT +
Preference number: 5 (lower is better)
Translates to: LDKCQRPQLMPRAGNVHSCQRPQ*MPRAGN
Trigger: ATTGCCTGCCCGTGGCATCAACTGGGGCCGCTGGCA...GCTATGCACATTGCCTGCCCGTGGCATCAACTGGGGCCGCTGGCACTTGTCTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS CCA 90 bp GGAAGATGTCAGCATGGAACGGGGACCTGCGGCAGCAAGAGCGCCTaGTTCATGCCTGTAGGGGCTGGTATGGGCTTTGCTTGGCACCCC +
Preference number: 5 (lower is better)
Translates to: GRCQHGTGTCGSKSA*FMPVGAGMGFAWHP
Trigger: GGGGTGCCAAGCAAAGCCCATACCAGCCCCTACAGGCATGAACCAGGCGCTCTTGCTGCCGCAGGTCCCCGTTCCATGCTGACATCTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485807.1
CDS-3UTR CAA 90 bp CTCAGGCGTCCTGGCCTAAGGAGGCAGGGCCCCCAAAAGAGCCAGGTCCTGGCACTGAGAACAGCATCCTaGGGAAGACCCAGCTGTGAG +
Preference number: 5 (lower is better)
Translates to: LRRPGLRRQGPQKSQVLALRTAS*GRPSCE
Trigger: CTCACAGCTGGGTCTTCCCAAGGATGCTGTTCTCAG...TGCCAGGACCTGGCTCTTTTGGGGGCCCTGCCTCCTTAGGCCAGGACGCCTGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS TCA 90 bp GGGCTCTCGGGAGCGTCTGTGCACTGCCTCCTGACTGCGGAAGCATaGGGGTCTTCACATACAGTTCAGGAGCGCAGGACCAAGCAGCCT +
Preference number: 5 (lower is better)
Translates to: GLSGASVHCLLTAEA*GSSHTVQERRTKQP
Trigger: AGGCTGCTTGGTCCTGCGCTCCTGAACTGTATGTGAAGACCCTCATGCTTCCGCAGTCAGGAGGCAGTGCACAGACGCTCCCGAGAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485807.1
CDS GCA 90 bp AAAGGCTGCCTGTTCGAAACCCAACCCAGCACCGTCCTCAGCGGCTaGCTCCCTCAGGACCAGGAGCCTCTTCTCAGCGATGACCTTGAG +
Preference number: 5 (lower is better)
Translates to: KGCLFETQPSTVLSG*LPQDQEPLLSDDLE
Trigger: CTCAAGGTCATCGCTGAGAAGAGGCTCCTGGTCCTGAGGGAGGCAGCCGCTGAGGACGGTGCTGGGTTGGGTTTCGAACAGGCAGCCTTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438896.3
ENST00000485807.1
ENST00000620518.5
CDS GCA 90 bp AACCAAGGAGGCCAGCACCTCTGTGATGCGCCCAACATCAAAGGCTaGCTGTTCGAAACCCAACCCAGCACCGTCCTCAGCGGCTGCCTC +
Preference number: 5 (lower is better)
Translates to: NQGGQHLCDAPNIKG*LFETQPSTVLSGCL
Trigger: GAGGCAGCCGCTGAGGACGGTGCTGGGTTGGGTTTCGAACAGGCAGCCTTTGATGTTGGGCGCATCACAGAGGTGCTGGCCTCCTTGGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438896.3
ENST00000485807.1
ENST00000620518.5
CDS GCA 90 bp TCCCTCCACTCGCTGACCTCCTCCTGCACGGCGCATAGCTCCTGCTaGAAGAAGCGCCACATGTTGGCCAGGTTGAAGCCATTGACCCAG +
Preference number: 5 (lower is better)
Translates to: SLHSLTSSCTAHSSC*KKRHMLARLKPLTQ
Trigger: CTGGGTCAATGGCTTCAACCTGGCCAACATGTGGCGCTTCTTGCAGCAGGAGCTATGCGCCGTGCAGGAGGAGGTCAGCGAGTGGAGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485807.1
ENST00000620518.5
CDS GCA 90 bp GAGTCCCTCCACTCGCTGACCTCCTCCTGCACGGCGCATAGCTCCTaGTGCAAGAAGCGCCACATGTTGGCCAGGTTGAAGCCATTGACC +
Preference number: 5 (lower is better)
Translates to: ESLHSLTSSCTAHSS*CKKRHMLARLKPLT
Trigger: GGTCAATGGCTTCAACCTGGCCAACATGTGGCGCTTCTTGCAGCAGGAGCTATGCGCCGTGCAGGAGGAGGTCAGCGAGTGGAGGGACTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485807.1
ENST00000620518.5
CDS GCA 90 bp TACAGTTCAGGAGCGCAGGACCAAGCAGCCTGGATGGTAATGGGCTaGGACCTGTGCTACCTTGTGCTGCCAGTTCGCACTGGGCCCTGG +
Preference number: 5 (lower is better)
Translates to: YSSGAQDQAAWMVMG*DLCYLVLPVRTGPW
Trigger: CCAGGGCCCAGTGCGAACTGGCAGCACAAGGTAGCACAGGTCGCAGCCCATTACCATCCAGGCTGCTTGGTCCTGCGCTCCTGAACTGTA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485807.1
CDS CCA 90 bp AGCAGCTCTTTGGGCTGTGGTGAGAACGCGCTGGTGTCCACTCTCTaGAAGTCGGGGTGCGCAACCAAGGAGGCCAGCACCTCTGTGATG +
Preference number: 5 (lower is better)
Translates to: SSSLGCGENALVSTL*KSGCATKEASTSVM
Trigger: CATCACAGAGGTGCTGGCCTCCTTGGTTGCGCACCCCGACTTCCAGAGAGTGGACACCAGCGCGTTCTCACCACAGCCCAAAGAGCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438896.3
ENST00000485807.1
ENST00000620518.5
CDS CCA 90 bp CCTGATAGGGGGCAGGAGAAGCAGCACATTACCAGGTTGTGCACCTaGTGGTGCCAGCCACTGGGCACAAACACCATCTCGCCCGCTTCC +
Preference number: 5 (lower is better)
Translates to: PDRGQEKQHITRLCT*WCQPLGTNTISPAS
Trigger: GGAAGCGGGCGAGATGGTGTTTGTGCCCAGTGGCTGGCACCACCAGGTGCACAACCTGGTAATGTGCTGCTTCTCCTGCCCCCTATCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000480590.1
ENST00000485807.1
CDS-3UTR CAA 90 bp GGCCGCTGGTTCCACAGCCCATCACCTGGAGGTGATGGAGGCCAACCCCAGCCCAAGCCATTGACCCAGTaGTGGTTGATGGAGATGGTG +
Preference number: 5 (lower is better)
Translates to: GRWFHSPSPGGDGGQPQPKPLTQ*WLMEMV
Trigger: CACCATCTCCATCAACCACAACTGGGTCAATGGCTT...GGGCTGGGGTTGGCCTCCATCACCTCCAGGTGATGGGCTGTGGAACCAGCGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR CAA 90 bp AGCAGACAGAAACCCCTGCCCTTCTTGGGGGCTTCCATCCTAGACAAGTGCCAGGCTCACTGCTGTGCCTaGATCGGCCTGGACGAGCCC +
Preference number: 5 (lower is better)
Translates to: SRQKPLPFLGASILDKCQAHCCA*IGLDEP
Trigger: GGGCTCGTCCAGGCCGATCAAGGCACAGCAGTGAGC...CTGGCACTTGTCTAGGATGGAAGCCCCCAAGAAGGGCAGGGGTTTCTGTCTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS GCA 90 bp GCCCTCATCATGACAGAAGCTGAAGGACAGGTCACCTCAGCTGCCTaGTGGCAGTGTCCGAGGCACATACCCCCACTCTTGGCCTCAGGT +
Preference number: 5 (lower is better)
Translates to: ALIMTEAEGQVTSAA*WQCPRHIPPLLASG
Trigger: ACCTGAGGCCAAGAGTGGGGGTATGTGCCTCGGACACTGCCAGCAGGCAGCTGAGGTGACCTGTCCTTCAGCTTCTGTCATGATGAGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485807.1
CDS-3UTR CAA 90 bp CCTGGGGCATCCTCTGCAAGAGGATCCCACGAGAGTCCATTCCCCACCACAGGCCCTGGACCCCACAGTTaGCAACTGGTACAACCACGT +
Preference number: 5 (lower is better)
Translates to: PGASSARGSHESPFPTTGPGPHS*QLVQPR
Trigger: ACGTGGTTGTACCAGTTGCAAACTGTGGGGTCCAGG...GCCTGTGGTGGGGAATGGACTCTCGTGGGATCCTCTTGCAGAGGATGCCCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR CAA 90 bp ACAGAAACCCCTGCCCTTCTTGGGGGCTTCCATCCTAGACAAGTGCCAGCGGCCATGGTGTCATCCAGGTaGTGCACCTGGTGGTGCCAG +
Preference number: 5 (lower is better)
Translates to: TETPALLGGFHPRQVPAAMVSSR*CTWWCQ
Trigger: CTGGCACCACCAGGTGCACAACCTGGATGACACCAT...GGCCGCTGGCACTTGTCTAGGATGGAAGCCCCCAAGAAGGGCAGGGGTTTCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR CAA 90 bp CTCAGGCGTCCTGGCCTAAGGAGGCAGGGCCCCCAAAAGAGCCAGGTCCTGGCAAAGCCATTGACCCAGTaGTGGTTGATGGAGATGGTG +
Preference number: 5 (lower is better)
Translates to: LRRPGLRRQGPQKSQVLAKPLTQ*WLMEMV
Trigger: CACCATCTCCATCAACCACAACTGGGTCAATGGCTT...TGCCAGGACCTGGCTCTTTTGGGGGCCCTGCCTCCTTAGGCCAGGACGCCTGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR CAA 90 bp CTAGACAAGTGCCAGCGGCCCCAGTTGATGCCACGGGCAGGCAATGTGCATAGCAAACCCCTGCCCTTCTaGGGGGCTTCCATCCTAGAC +
Preference number: 5 (lower is better)
Translates to: LDKCQRPQLMPRAGNVHSKPLPF*GASILD
Trigger: GTCTAGGATGGAAGCCCCCAAGAAGGGCAGGGGTTT...GCTATGCACATTGCCTGCCCGTGGCATCAACTGGGGCCGCTGGCACTTGTCTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS TCA 90 bp CCCAGAACTCATTCAGCCAGTCGGACGAGAAGTACACAGGCAGGGTaGAAACGTCCTCCACCGGAAAGTCCCTGTGAGGAGGGCGCAAGG +
Preference number: 5 (lower is better)
Translates to: PRTHSASRTRSTQAG*KRPPPESPCEEGAR
Trigger: CCTTGCGCCCTCCTCACAGGGACTTTCCGGTGGAGGACGTTTTCACCCTGCCTGTGTACTTCTCGTCCGACTGGCTGAATGAGTTCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465251.1
ENST00000485807.1
CDS GCA 90 bp CAGGACCTCATGATGACCTCCTCCTGCACGGCGCATAGCTCCTGCTaGAAGAAGCGCCACATGTTGGCCAGGTTGAAGCCATTGACCCAG +
Preference number: 5 (lower is better)
Translates to: QDLMMTSSCTAHSSC*KKRHMLARLKPLTQ
Trigger: CTGGGTCAATGGCTTCAACCTGGCCAACATGTGGCGCTTCTTGCAGCAGGAGCTATGCGCCGTGCAGGAGGAGGTCATCATGAGGTCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438896.3
CDS GCA 90 bp GAGCAGGACCTCATGATGACCTCCTCCTGCACGGCGCATAGCTCCTaGTGCAAGAAGCGCCACATGTTGGCCAGGTTGAAGCCATTGACC +
Preference number: 5 (lower is better)
Translates to: EQDLMMTSSCTAHSS*CKKRHMLARLKPLT
Trigger: GGTCAATGGCTTCAACCTGGCCAACATGTGGCGCTTCTTGCAGCAGGAGCTATGCGCCGTGCAGGAGGAGGTCATCATGAGGTCCTGCTC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438896.3
CDS CCA 90 bp CCACAGACATTGACAGACCAGCTGAAGGAGCGGAAGATGTCAGCATaGAACGGGGACCTGCGGCAGCAAGAGCGCCTGGTTCATGCCTGT +
Preference number: 5 (lower is better)
Translates to: PQTLTDQLKERKMSA*NGDLRQQERLVHAC
Trigger: ACAGGCATGAACCAGGCGCTCTTGCTGCCGCAGGTCCCCGTTCCATGCTGACATCTTCCGCTCCTTCAGCTGGTCTGTCAATGTCTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485807.1
CDS CCA 90 bp CTCATCATGACAGAAGCTGAAGGACAGGTCACCTCAGCTGCCTGCTaGCAGTGTCCGAGGCACATACCCCCACTCTTGGCCTCAGGTGTG +
Preference number: 5 (lower is better)
Translates to: LIMTEAEGQVTSAAC*QCPRHIPPLLASGV
Trigger: CACACCTGAGGCCAAGAGTGGGGGTATGTGCCTCGGACACTGCCAGCAGGCAGCTGAGGTGACCTGTCCTTCAGCTTCTGTCATGATGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485807.1
CDS-3UTR CAA 90 bp CTAGACAAGTGCCAGCGGCCCCAGTTGATGCCACGGGCAGGCAATGTGCATAGCCCTGGACCCCACAGTTaGCAACTGGTACAACCACGT +
Preference number: 5 (lower is better)
Translates to: LDKCQRPQLMPRAGNVHSPGPHS*QLVQPR
Trigger: ACGTGGTTGTACCAGTTGCAAACTGTGGGGTCCAGG...GCTATGCACATTGCCTGCCCGTGGCATCAACTGGGGCCGCTGGCACTTGTCTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR CAA 90 bp CCTGGGGCATCCTCTGCAAGAGGATCCCACGAGAGTCCATTCCCCACCACAGGCCACATGTTGGCCAGGTaGAAGCCATTGACCCAGTTG +
Preference number: 5 (lower is better)
Translates to: PGASSARGSHESPFPTTGHMLAR*KPLTQL
Trigger: CAACTGGGTCAATGGCTTCAACCTGGCCAACATGTG...GCCTGTGGTGGGGAATGGACTCTCGTGGGATCCTCTTGCAGAGGATGCCCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR CAA 90 bp AGCAGACAGAAACCCCTGCCCTTCTTGGGGGCTTCCATCCTAGACAAGTGCCAGATGGTGTCATCCAGGTaGTGCACCTGGTGGTGCCAG +
Preference number: 5 (lower is better)
Translates to: SRQKPLPFLGASILDKCQMVSSR*CTWWCQ
Trigger: CTGGCACCACCAGGTGCACAACCTGGATGACACCAT...CTGGCACTTGTCTAGGATGGAAGCCCCCAAGAAGGGCAGGGGTTTCTGTCTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR CAA 90 bp AGCCAGGGGTGGTCCAATGGCCTGAGACGAGGGGACAGGGCTGGCCTATTAAGAGCCAGGTTGAAGCCATaGACCCAGTTGTGGTTGATG +
Preference number: 5 (lower is better)
Translates to: SQGWSNGLRRGDRAGLLRARLKP*TQLWLM
Trigger: CATCAACCACAACTGGGTCAATGGCTTCAACCTGGC...TCTTAATAGGCCAGCCCTGTCCCCTCGTCTCAGGCCATTGGACCACCCCTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR CAA 90 bp TTGATCGGCCTGGACGAGCCCGCCCACACCTCCATCATACCCAGTGTGAAGAGGCACATGTTGGCCAGGTaGAAGCCATTGACCCAGTTG +
Preference number: 5 (lower is better)
Translates to: LIGLDEPAHTSIIPSVKRHMLAR*KPLTQL
Trigger: CAACTGGGTCAATGGCTTCAACCTGGCCAACATGTG...CCTCTTCACACTGGGTATGATGGAGGTGTGGGCGGGCTCGTCCAGGCCGATCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR CAA 90 bp ACAGAAACCCCTGCCCTTCTTGGGGGCTTCCATCCTAGACAAGTGCCAGCGGCCAAGAAGCGCCACATGTaGGCCAGGTTGAAGCCATTG +
Preference number: 5 (lower is better)
Translates to: TETPALLGGFHPRQVPAAKKRHM*ARLKPL
Trigger: CAATGGCTTCAACCTGGCCAACATGTGGCGCTTCTT...GGCCGCTGGCACTTGTCTAGGATGGAAGCCCCCAAGAAGGGCAGGGGTTTCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR CAA 90 bp TGGACTCTCGGTCAAGGACAGGGCTGGGAGAGTGCCAGTCTCCACAAACTGTGGCTGAGAACAGCATCCTaGGGAAGACCCAGCTGTGAG +
Preference number: 5 (lower is better)
Translates to: WTLGQGQGWESASLHKLWLRTAS*GRPSCE
Trigger: CTCACAGCTGGGTCTTCCCAAGGATGCTGTTCTCAG...CCACAGTTTGTGGAGACTGGCACTCTCCCAGCCCTGTCCTTGACCGAGAGTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR CAA 90 bp ACAGAAACCCCTGCCCTTCTTGGGGGCTTCCATCCTAGACAAGTGCCAGCGGCCTTGACCCAGTTGTGGTaGATGGAGATGGTGTCATCC +
Preference number: 5 (lower is better)
Translates to: TETPALLGGFHPRQVPAALTQLW*MEMVSS
Trigger: GGATGACACCATCTCCATCAACCACAACTGGGTCAA...GGCCGCTGGCACTTGTCTAGGATGGAAGCCCCCAAGAAGGGCAGGGGTTTCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR CAA 90 bp AATGTGCATAGCCATGGCACGTGCCGTCCCTGTGGATTCGGATGCCTCCTCCCCTTGACCCAGTTGTGGTaGATGGAGATGGTGTCATCC +
Preference number: 5 (lower is better)
Translates to: NVHSHGTCRPCGFGCLLPLTQLW*MEMVSS
Trigger: GGATGACACCATCTCCATCAACCACAACTGGGTCAA...GGGGAGGAGGCATCCGAATCCACAGGGACGGCACGTGCCATGGCTATGCACATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS TCA 90 bp CCCAGAACTCATTCAGCCAGTCGGACGAGAAGTACACAGGCAGGGTaGAAACGTCCTCCACCGGAAAGTCCCTGCACAAGTGCCAGTCTT +
Preference number: 5 (lower is better)
Translates to: PRTHSASRTRSTQAG*KRPPPESPCTSASL
Trigger: AAGACTGGCACTTGTGCAGGGACTTTCCGGTGGAGGACGTTTTCACCCTGCCTGTGTACTTCTCGTCCGACTGGCTGAATGAGTTCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438896.3
ENST00000480590.1
ENST00000620518.5
CDS TCA 90 bp AGCCCCAGCCTGAGATTCTCAATGCCTGCTTTAACCAAGAAAAAGTaGCTGAGGCTAGCAGGGCTCTCGGGAGCGTCTGTGCACTGCCTC +
Preference number: 5 (lower is better)
Translates to: SPSLRFSMPALTKKK*LRLAGLSGASVHCL
Trigger: GAGGCAGTGCACAGACGCTCCCGAGAGCCCTGCTAGCCTCAGTCACTTTTTCTTGGTTAAAGCAGGCATTGAGAATCTCAGGCTGGGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485807.1
CDS CCA 90 bp AAGAAGCGCCACATGTTGGCCAGGTTGAAGCCATTGACCCAGTTGTaGTTGATGGAGATGGTGTCATCCTGGAAGGGGCACAGTGCAGGC +
Preference number: 5 (lower is better)
Translates to: KKRHMLARLKPLTQL*LMEMVSSWKGHSAG
Trigger: GCCTGCACTGTGCCCCTTCCAGGATGACACCATCTCCATCAACCACAACTGGGTCAATGGCTTCAACCTGGCCAACATGTGGCGCTTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485807.1
CDS CCA 90 bp ATGAGGGTCTTCACATACAGTTCAGGAGCGCAGGACCAAGCAGCCTaGATGGTAATGGGCTGCGACCTGTGCTACCTTGTGCTGCCAGTT +
Preference number: 5 (lower is better)
Translates to: MRVFTYSSGAQDQAA*MVMGCDLCYLVLPV
Trigger: AACTGGCAGCACAAGGTAGCACAGGTCGCAGCCCATTACCATCCAGGCTGCTTGGTCCTGCGCTCCTGAACTGTATGTGAAGACCCTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485807.1
CDS CCA 90 bp AAGAAGCGCCACATGTTGGCCAGGTTGAAGCCATTGACCCAGTTGTaGTTGATGGAGATGGTGTCATCCAGGTTGTGCACCTGGTGGTGC +
Preference number: 5 (lower is better)
Translates to: KKRHMLARLKPLTQL*LMEMVSSRLCTWWC
Trigger: GCACCACCAGGTGCACAACCTGGATGACACCATCTCCATCAACCACAACTGGGTCAATGGCTTCAACCTGGCCAACATGTGGCGCTTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS-3UTR CAA 90 bp AGCAGACAGAAACCCCTGCCCTTCTTGGGGGCTTCCATCCTAGACAAGTGCCAGAGAGTCATGTGCTCTTaGGGGTTCGAGTTGTATTCC +
Preference number: 5 (lower is better)
Translates to: SRQKPLPFLGASILDKCQRVMCS*GFELYS
Trigger: GGAATACAACTCGAACCCCAAAGAGCACATGACTCT...CTGGCACTTGTCTAGGATGGAAGCCCCCAAGAAGGGCAGGGGTTTCTGTCTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS TCA 90 bp TTTTTGCCAATCTGGAGTGAGGTATGCAAAAGGAGTCATGGTCATTaGCTATGGAGTCATCGATGCCGGCTGCAGTTCAGCCGTTGCCCT +
Preference number: 5 (lower is better)
Translates to: FLPIWSEVCKRSHGH*LWSHRCRLQFSRCP
Trigger: AGGGCAACGGCTGAACTGCAGCCGGCATCGATGACTCCATAGTCAATGACCATGACTCCTTTTGCATACCTCACTCCAGATTGGCAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485807.1
CDS CCA 72 bp CCCGGCTCCGAGACGAAGGCTACCCGGCCCGGAGCCTaGCCGACGCCGGGGACATCGACCCCCAGGCCTCGG +
Preference number: 6 (lower is better)
Translates to: PGSETKATRPGA*PTPGTSTPRPR
Trigger: CCGAGGCCTGGGGGTCGATGTCCCCGGCGTCGGCCAGGCTCCGGGCCGGGTAGCCTTCGTCTCGGAGCCGGG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS GCA 72 bp AGCCTCGGAACCAGAAGACGCAGGGCGCCGCGTTTCTaGCCCGCCAGCGCCTGGGGCTCCGGGCCTGCACGC +
Preference number: 6 (lower is better)
Translates to: SLGTRRRRAPRF*PASAWGSGPAR
Trigger: GCGTGCAGGCCCGGAGCCCCAGGCGCTGGCGGGGCAGAAACGCGGCGCCCTGCGTCTTCTGGTTCCGAGGCT
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438896.3
CDS GCA 72 bp CGCAGAGTGCTGGGGAGGTCACGTCGTAGGGCAGGTTaGCGTGGCGGTCCCGCAGGGCCTCTTCCTGCCCTG +
Preference number: 6 (lower is better)
Translates to: RRVLGRSRRRAG*RGGPAGPLPAL
Trigger: CAGGGCAGGAAGAGGCCCTGCGGGACCGCCACGGCAACCTGCCCTACGACGTGACCTCCCCAGCACTCTGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000438896.3
ENST00000480590.1
ENST00000485807.1
ENST00000620518.5
CDS TCA 72 bp GGACCCTCCTCCTCACTTCCGCCGGAGCGGAAACGGTaGGGACCAGCCTCGGAACCAGAAGACGCAGGGCGC +
Preference number: 6 (lower is better)
Translates to: GPSSSLPPERKR*GPASEPEDAGR
Trigger: GCGCCCTGCGTCTTCTGGTTCCGAGGCTGGTCCTCACCGTTTCCGCTCCGGCGGAAGTGAGGAGGAGGGTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438896.3
CDS GCA 72 bp CGCCCACACTCAGCCTGGGCCTGGTCCTGGCAAGGCTaGAGCCGTGCATGTTTGCTACCTCCCCCTCCTCCC +
Preference number: 6 (lower is better)
Translates to: RPHSAWAWSWQG*SRACLLPPPPP
Trigger: GGGAGGAGGGGGAGGTAGCAAACATGCACGGCTGCAGCCTTGCCAGGACCAGGCCCAGGCTGAGTGTGGGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485807.1
CDS TCA 72 bp GGTGGTGCCAGTCGGGCATGGAGTCCCTCCACTCGCTaGCCTCCTCCTGCACGGCGCATAGCTCCTGCTGCA +
Preference number: 6 (lower is better)
Translates to: GGASRAWSPSTR*PPPARRIAPAA
Trigger: TGCAGCAGGAGCTATGCGCCGTGCAGGAGGAGGTCAGCGAGTGGAGGGACTCCATGCCCGACTGGCACCACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485807.1
ENST00000620518.5
CDS TCA 72 bp GCCCAAGCTCAGAGGTTACCGGAGGGGCTAAATGGGTaGGCCACGCCCACACTCAGCCTGGGCCTGGTCCTG +
Preference number: 6 (lower is better)
Translates to: AQAQRLPEGLNG*ATPTLSLGLVL
Trigger: CAGGACCAGGCCCAGGCTGAGTGTGGGCGTGGCTCACCCATTTAGCCCCTCCGGTAACCTCTGAGCTTGGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485807.1
CDS GCA 72 bp TCGGGCATGGAGTCCCTCCACTCGCTGACCTCCTCCTaGACGGCGCATAGCTCCTGCTGCAAGAAGCGCCAC +
Preference number: 6 (lower is better)
Translates to: SGMESLHSLTSS*TAHSSCCKKRH
Trigger: GTGGCGCTTCTTGCAGCAGGAGCTATGCGCCGTGCAGGAGGAGGTCAGCGAGTGGAGGGACTCCATGCCCGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485807.1
ENST00000620518.5
CDS GCA 72 bp CTCAGCCTGGGCCTGGTCCTGGCAAGGCTGCAGCCGTaGATGTTTGCTACCTCCCCCTCCTCCCCGACAAAG +
Preference number: 6 (lower is better)
Translates to: LSLGLVLARLQP*MFATSPSSPTK
Trigger: CTTTGTCGGGGAGGAGGGGGAGGTAGCAAACATGCACGGCTGCAGCCTTGCCAGGACCAGGCCCAGGCTGAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485807.1
CDS GCA 72 bp AAGCTGGTTCCGTGGGTGCAGGTGTGTGTCGCAGAGTaGTGGGGAGGTCACGTCGTAGGGCAGGTTGCCGTG +
Preference number: 6 (lower is better)
Translates to: KLVPWVQVCVAE*WGGHVVGQVAV
Trigger: CACGGCAACCTGCCCTACGACGTGACCTCCCCAGCACTCTGCGACACACACCTGCACCCACGGAACCAGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000438896.3
ENST00000480590.1
ENST00000485807.1
ENST00000620518.5
CDS GCA 72 bp TTCGGGTTCCACTCCCACATCCGTGGCCTCACCAGCTaGCCGCAGGCCCCGCGTAGACAAAGCGGTAGTCAT +
Preference number: 6 (lower is better)
Translates to: FGFHSHIRGLTS*PQAPRRQSGSH
Trigger: ATGACTACCGCTTTGTCTACGCGGGGCCTGCGGGCAGCTGGTGAGGCCACGGATGTGGGAGTGGAACCCGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485807.1
CDS CCA 72 bp TTGGGCTGTGGTGAGAACGCGCTGGTGTCCACTCTCTaGAAGTCGGGGTGCGCAACCAAGGAGGCCAGCACC +
Preference number: 6 (lower is better)
Translates to: LGCGENALVSTL*KSGCATKEAST
Trigger: GGTGCTGGCCTCCTTGGTTGCGCACCCCGACTTCCAGAGAGTGGACACCAGCGCGTTCTCACCACAGCCCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438896.3
ENST00000485807.1
ENST00000620518.5
CDS CCA 72 bp CTCCTCCCCGACAAAGCACCTTTGCTGCCCGTGGTTTaGGCAGCGCCAGCTCCATCTGTAGGAGGCCGGATG +
Preference number: 6 (lower is better)
Translates to: LLPDKAPLLPVV*AAPAPSVGGRM
Trigger: CATCCGGCCTCCTACAGATGGAGCTGGCGCTGCCCAAACCACGGGCAGCAAAGGTGCTTTGTCGGGGAGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485807.1
CDS CCA 72 bp AGAGGCCCAAGCTCAGAGGTTACCGGAGGGGCTAAATaGGTGAGCCACGCCCACACTCAGCCTGGGCCTGGT +
Preference number: 6 (lower is better)
Translates to: RGPSSEVTGGAK*VSHAHTQPGPG
Trigger: ACCAGGCCCAGGCTGAGTGTGGGCGTGGCTCACCCATTTAGCCCCTCCGGTAACCTCTGAGCTTGGGCCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485807.1
CDS CCA 72 bp CCTGCTGGCAGTGTCCGAGGCACATACCCCCACTCTTaGCCTCAGGTGTGCCTGTGTGGCAGGGTGCCAAGA +
Preference number: 6 (lower is better)
Translates to: PAGSVRGTYPHS*PQVCLCGRVPR
Trigger: TCTTGGCACCCTGCCACACAGGCACACCTGAGGCCAAGAGTGGGGGTATGTGCCTCGGACACTGCCAGCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485807.1
CDS CAA 72 bp CCTCCTCCCCGACAAAGCACCTTTGCTGCCCGTGGTTaGGGCAGCGCCAGCTCCATCTGTAGGAGGCCGGAT +
Preference number: 6 (lower is better)
Translates to: PPPRQSTFAARG*GSASSICRRPD
Trigger: ATCCGGCCTCCTACAGATGGAGCTGGCGCTGCCCAAACCACGGGCAGCAAAGGTGCTTTGTCGGGGAGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485807.1
CDS CAA 90 bp GCCGTGCATGTTTGCTACCTCCCCCTCCTCCCCGACAAAGCACCTTaGCTGCCCGTGGTTTGGGCAGCGCCAGCTCCATCTGTAGGAGGC +
Preference number: 6 (lower is better)
Translates to: AVHVCYLPLLPDKAP*LPVVWAAPAPSVGG
Trigger: GCCTCCTACAGATGGAGCTGGCGCTGCCCAAACCACGGGCAGCAAAGGTGCTTTGTCGGGGAGGAGGGGGAGGTAGCAAACATGCACGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485807.1
CDS TCA 72 bp CACTGGGCACAAACACCATCTCGCCCGCTTCCTGCGTaGTCTCCAAGGGTGGGCCAGCAAGCTGGTTCCGTG +
Preference number: 6 (lower is better)
Translates to: HWAQTPSRPLPA*SPRVGQQAGSV
Trigger: CACGGAACCAGCTTGCTGGCCCACCCTTGGAGATCACGCAGGAAGCGGGCGAGATGGTGTTTGTGCCCAGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000438896.3
ENST00000480590.1
ENST00000485807.1
ENST00000620518.5
CDS GCA 72 bp TTTGCTACCTCCCCCTCCTCCCCGACAAAGCACCTTTaGTGCCCGTGGTTTGGGCAGCGCCAGCTCCATCTG +
Preference number: 6 (lower is better)
Translates to: FATSPSSPTKHL*CPWFGQRQLHL
Trigger: CAGATGGAGCTGGCGCTGCCCAAACCACGGGCAGCAAAGGTGCTTTGTCGGGGAGGAGGGGGAGGTAGCAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485807.1
CDS GCA 72 bp GACCAAGCAGCCTGGATGGTAATGGGCTGCGACCTGTaGTACCTTGTGCTGCCAGTTCGCACTGGGCCCTGG +
Preference number: 6 (lower is better)
Translates to: DQAAWMVMGCDL*YLVLPVRTGPW
Trigger: CCAGGGCCCAGTGCGAACTGGCAGCACAAGGTAGCACAGGTCGCAGCCCATTACCATCCAGGCTGCTTGGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485807.1
CDS CCA 72 bp CAGCATGGAACGGGGACCTGCGGCAGCAAGAGCGCCTaGTTCATGCCTGTAGGGGCTGGTATGGGCTTTGCT +
Preference number: 6 (lower is better)
Translates to: QHGTGTCGSKSA*FMPVGAGMGFA
Trigger: AGCAAAGCCCATACCAGCCCCTACAGGCATGAACCAGGCGCTCTTGCTGCCGCAGGTCCCCGTTCCATGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485807.1
CDS CAA 72 bp GTTTGCTACCTCCCCCTCCTCCCCGACAAAGCACCTTaGCTGCCCGTGGTTTGGGCAGCGCCAGCTCCATCT +
Preference number: 6 (lower is better)
Translates to: VCYLPLLPDKAP*LPVVWAAPAPS
Trigger: AGATGGAGCTGGCGCTGCCCAAACCACGGGCAGCAAAGGTGCTTTGTCGGGGAGGAGGGGGAGGTAGCAAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485807.1
CDS GCA 72 bp GGCCAGCACCTCTGTGATGCGCCCAACATCAAAGGCTaGCTGTTCGAAACCCAACCCAGCACCGTCCTCAGC +
Preference number: 6 (lower is better)
Translates to: GQHLCDAPNIKG*LFETQPSTVLS
Trigger: GCTGAGGACGGTGCTGGGTTGGGTTTCGAACAGGCAGCCTTTGATGTTGGGCGCATCACAGAGGTGCTGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438896.3
ENST00000485807.1
ENST00000620518.5
CDS GCA 72 bp TCGCTGACCTCCTCCTGCACGGCGCATAGCTCCTGCTaGAAGAAGCGCCACATGTTGGCCAGGTTGAAGCCA +
Preference number: 6 (lower is better)
Translates to: SLTSSCTAHSSC*KKRHMLARLKP
Trigger: TGGCTTCAACCTGGCCAACATGTGGCGCTTCTTGCAGCAGGAGCTATGCGCCGTGCAGGAGGAGGTCAGCGA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485807.1
ENST00000620518.5
CDS GCA 72 bp CACTCGCTGACCTCCTCCTGCACGGCGCATAGCTCCTaGTGCAAGAAGCGCCACATGTTGGCCAGGTTGAAG +
Preference number: 6 (lower is better)
Translates to: HSLTSSCTAHSS*CKKRHMLARLK
Trigger: CTTCAACCTGGCCAACATGTGGCGCTTCTTGCAGCAGGAGCTATGCGCCGTGCAGGAGGAGGTCAGCGAGTG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485807.1
ENST00000620518.5
CDS GCA 72 bp GGAGCGCAGGACCAAGCAGCCTGGATGGTAATGGGCTaGGACCTGTGCTACCTTGTGCTGCCAGTTCGCACT +
Preference number: 6 (lower is better)
Translates to: GAQDQAAWMVMG*DLCYLVLPVRT
Trigger: AGTGCGAACTGGCAGCACAAGGTAGCACAGGTCGCAGCCCATTACCATCCAGGCTGCTTGGTCCTGCGCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485807.1
CDS CCA 72 bp AGTGAACCCAGAGCAAGTAGACCCAGGGACCGGCAGTaGGTGAAACAGAGGCTAGGCCTCAGCGACACCACC +
Preference number: 6 (lower is better)
Translates to: SEPRASRPRDRQ*VKQRLGLSDTT
Trigger: GGTGGTGTCGCTGAGGCCTAGCCTCTGTTTCACCCACTGCCGGTCCCTGGGTCTACTTGCTCTGGGTTCACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480590.1
ENST00000485807.1
CDS TCA 72 bp AGTCGGGGTGCGCAACCAAGGAGGCCAGCACCTCTGTaGTGCGCCCAACATCAAAGGCTGCCTGTTCGAAAC +
Preference number: 6 (lower is better)
Translates to: SRGAQPRRPAPL*CAQHQRLPVRN
Trigger: GTTTCGAACAGGCAGCCTTTGATGTTGGGCGCATCACAGAGGTGCTGGCCTCCTTGGTTGCGCACCCCGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438896.3
ENST00000485807.1
ENST00000620518.5
CDS GCA 72 bp CCTCTCTTCCACCCGTCCTTCTATCCTCACGACAGGTaGTATGGGGCCGCAGCAGCATCAACAGCCTCTCTC +
Preference number: 6 (lower is better)
Translates to: PLFHPSFYPHDR*YGAAAASTASL
Trigger: GAGAGAGGCTGTTGATGCTGCTGCGGCCCCATAGCACCTGTCGTGAGGATAGAAGGACGGGTGGAAGAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438896.3
ENST00000485807.1
ENST00000620518.5
CDS GCA 72 bp GATAGGGGGCAGGAGAAGCAGCACATTACCAGGTTGTaGACCTGGTGGTGCCAGCCACTGGGCACAAACACC +
Preference number: 6 (lower is better)
Translates to: DRGQEKQHITRL*TWWCQPLGTNT
Trigger: GGTGTTTGTGCCCAGTGGCTGGCACCACCAGGTGCACAACCTGGTAATGTGCTGCTTCTCCTGCCCCCTATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000480590.1
ENST00000485807.1
CDS CCA 72 bp GGGCAGGAGAAGCAGCACATTACCAGGTTGTGCACCTaGTGGTGCCAGCCACTGGGCACAAACACCATCTCG +
Preference number: 6 (lower is better)
Translates to: GQEKQHITRLCT*WCQPLGTNTIS
Trigger: CGAGATGGTGTTTGTGCCCAGTGGCTGGCACCACCAGGTGCACAACCTGGTAATGTGCTGCTTCTCCTGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480590.1
ENST00000485807.1
CDS CCA 72 bp TTGACAGACCAGCTGAAGGAGCGGAAGATGTCAGCATaGAACGGGGACCTGCGGCAGCAAGAGCGCCTGGTT +
Preference number: 6 (lower is better)
Translates to: LTDQLKERKMSA*NGDLRQQERLV
Trigger: AACCAGGCGCTCTTGCTGCCGCAGGTCCCCGTTCCATGCTGACATCTTCCGCTCCTTCAGCTGGTCTGTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485807.1
CDS GCA 72 bp ATGATGACCTCCTCCTGCACGGCGCATAGCTCCTGCTaGAAGAAGCGCCACATGTTGGCCAGGTTGAAGCCA +
Preference number: 6 (lower is better)
Translates to: MMTSSCTAHSSC*KKRHMLARLKP
Trigger: TGGCTTCAACCTGGCCAACATGTGGCGCTTCTTGCAGCAGGAGCTATGCGCCGTGCAGGAGGAGGTCATCAT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438896.3
CDS GCA 72 bp CTCATGATGACCTCCTCCTGCACGGCGCATAGCTCCTaGTGCAAGAAGCGCCACATGTTGGCCAGGTTGAAG +
Preference number: 6 (lower is better)
Translates to: LMMTSSCTAHSS*CKKRHMLARLK
Trigger: CTTCAACCTGGCCAACATGTGGCGCTTCTTGCAGCAGGAGCTATGCGCCGTGCAGGAGGAGGTCATCATGAG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438896.3
CDS CAA 90 bp TCCTCCTGCACGGCGCATAGCTCCTGCTGCAAGAAGCGCCACATGTaGGCCAGGTTGAAGCCATTGACCCAGTTGTGGTTGATGGAGATG +
Preference number: 6 (lower is better)
Translates to: SSCTAHSSCCKKRHM*ARLKPLTQLWLMEM
Trigger: CATCTCCATCAACCACAACTGGGTCAATGGCTTCAACCTGGCCAACATGTGGCGCTTCTTGCAGCAGGAGCTATGCGCCGTGCAGGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438896.3
ENST00000485807.1
ENST00000620518.5
CDS CAA 90 bp AAGCGCCACATGTTGGCCAGGTTGAAGCCATTGACCCAGTTGTGGTaGATGGAGATGGTGTCATCCTGGAAGGGGCACAGTGCAGGCAGG +
Preference number: 6 (lower is better)
Translates to: KRHMLARLKPLTQLW*MEMVSSWKGHSAGR
Trigger: CCTGCCTGCACTGTGCCCCTTCCAGGATGACACCATCTCCATCAACCACAACTGGGTCAATGGCTTCAACCTGGCCAACATGTGGCGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485807.1
CDS TCA 72 bp CATTCAGCCAGTCGGACGAGAAGTACACAGGCAGGGTaGAAACGTCCTCCACCGGAAAGTCCCTGTGAGGAG +
Preference number: 6 (lower is better)
Translates to: HSASRTRSTQAG*KRPPPESPCEE
Trigger: CTCCTCACAGGGACTTTCCGGTGGAGGACGTTTTCACCCTGCCTGTGTACTTCTCGTCCGACTGGCTGAATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465251.1
ENST00000485807.1
CDS CAA 72 bp ACGGCGCATAGCTCCTGCTGCAAGAAGCGCCACATGTaGGCCAGGTTGAAGCCATTGACCCAGTTGTGGTTG +
Preference number: 6 (lower is better)
Translates to: TAHSSCCKKRHM*ARLKPLTQLWL
Trigger: CAACCACAACTGGGTCAATGGCTTCAACCTGGCCAACATGTGGCGCTTCTTGCAGCAGGAGCTATGCGCCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438896.3
ENST00000485807.1
ENST00000620518.5
CDS CAA 90 bp ACGGCGCATAGCTCCTGCTGCAAGAAGCGCCACATGTTGGCCAGGTaGAAGCCATTGACCCAGTTGTGGTTGATGGAGATGGTGTCATCC +
Preference number: 6 (lower is better)
Translates to: TAHSSCCKKRHMLAR*KPLTQLWLMEMVSS
Trigger: GGATGACACCATCTCCATCAACCACAACTGGGTCAATGGCTTCAACCTGGCCAACATGTGGCGCTTCTTGCAGCAGGAGCTATGCGCCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438896.3
ENST00000485807.1
ENST00000620518.5
CDS CAA 90 bp AGCTCCTGCTGCAAGAAGCGCCACATGTTGGCCAGGTTGAAGCCATaGACCCAGTTGTGGTTGATGGAGATGGTGTCATCCTGGAAGGGG +
Preference number: 6 (lower is better)
Translates to: SSCCKKRHMLARLKP*TQLWLMEMVSSWKG
Trigger: CCCCTTCCAGGATGACACCATCTCCATCAACCACAACTGGGTCAATGGCTTCAACCTGGCCAACATGTGGCGCTTCTTGCAGCAGGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485807.1
CDS TCA 72 bp CATTCAGCCAGTCGGACGAGAAGTACACAGGCAGGGTaGAAACGTCCTCCACCGGAAAGTCCCTGCACAAGT +
Preference number: 6 (lower is better)
Translates to: HSASRTRSTQAG*KRPPPESPCTS
Trigger: ACTTGTGCAGGGACTTTCCGGTGGAGGACGTTTTCACCCTGCCTGTGTACTTCTCGTCCGACTGGCTGAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438896.3
ENST00000480590.1
ENST00000620518.5
CDS GCA 72 bp GTCATGGTCATTGACTATGGAGTCATCGATGCCGGCTaGAGTTCAGCCGTTGCCCTGTGGAGGGCTCTATCT +
Preference number: 6 (lower is better)
Translates to: VMVIDYGVIDAG*SSAVALWRALS
Trigger: AGATAGAGCCCTCCACAGGGCAACGGCTGAACTGCAGCCGGCATCGATGACTCCATAGTCAATGACCATGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485807.1
CDS CCA 72 bp GGGGCCCAGCATACAGGTCCCTGGAAAGCTGTTGGCTaGAGCGCATTCATTCGACAGACACATATGAAGCAC +
Preference number: 6 (lower is better)
Translates to: GAQHTGPWKAVG*SAFIRQTHMKH
Trigger: GTGCTTCATATGTGTCTGTCGAATGAATGCGCTCCAGCCAACAGCTTTCCAGGGACCTGTATGCTGGGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485807.1
CDS CCA 72 bp TTCACATACAGTTCAGGAGCGCAGGACCAAGCAGCCTaGATGGTAATGGGCTGCGACCTGTGCTACCTTGTG +
Preference number: 6 (lower is better)
Translates to: FTYSSGAQDQAA*MVMGCDLCYLV
Trigger: CACAAGGTAGCACAGGTCGCAGCCCATTACCATCCAGGCTGCTTGGTCCTGCGCTCCTGAACTGTATGTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485807.1
CDS CAA 72 bp CGCCACATGTTGGCCAGGTTGAAGCCATTGACCCAGTaGTGGTTGATGGAGATGGTGTCATCCTGGAAGGGG +
Preference number: 6 (lower is better)
Translates to: RHMLARLKPLTQ*WLMEMVSSWKG
Trigger: CCCCTTCCAGGATGACACCATCTCCATCAACCACAACTGGGTCAATGGCTTCAACCTGGCCAACATGTGGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485807.1
CDS CAA 90 bp TGCAAGAAGCGCCACATGTTGGCCAGGTTGAAGCCATTGACCCAGTaGTGGTTGATGGAGATGGTGTCATCCAGGTTGTGCACCTGGTGG +
Preference number: 6 (lower is better)
Translates to: CKKRHMLARLKPLTQ*WLMEMVSSRLCTWW
Trigger: CCACCAGGTGCACAACCTGGATGACACCATCTCCATCAACCACAACTGGGTCAATGGCTTCAACCTGGCCAACATGTGGCGCTTCTTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS CAA 90 bp AGCTCCTGCTGCAAGAAGCGCCACATGTTGGCCAGGTTGAAGCCATaGACCCAGTTGTGGTTGATGGAGATGGTGTCATCCAGGTTGTGC +
Preference number: 6 (lower is better)
Translates to: SSCCKKRHMLARLKP*TQLWLMEMVSSRLC
Trigger: GCACAACCTGGATGACACCATCTCCATCAACCACAACTGGGTCAATGGCTTCAACCTGGCCAACATGTGGCGCTTCTTGCAGCAGGAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS CAA 90 bp TGCAAGAAGCGCCACATGTTGGCCAGGTTGAAGCCATTGACCCAGTaGTGGTTGATGGAGATGGTGTCATCCTGGAAGGGGCACAGTGCA +
Preference number: 6 (lower is better)
Translates to: CKKRHMLARLKPLTQ*WLMEMVSSWKGHSA
Trigger: TGCACTGTGCCCCTTCCAGGATGACACCATCTCCATCAACCACAACTGGGTCAATGGCTTCAACCTGGCCAACATGTGGCGCTTCTTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485807.1
CDS CCA 72 bp CACATGTTGGCCAGGTTGAAGCCATTGACCCAGTTGTaGTTGATGGAGATGGTGTCATCCTGGAAGGGGCAC +
Preference number: 6 (lower is better)
Translates to: HMLARLKPLTQL*LMEMVSSWKGH
Trigger: GTGCCCCTTCCAGGATGACACCATCTCCATCAACCACAACTGGGTCAATGGCTTCAACCTGGCCAACATGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485807.1
CDS CAA 72 bp CGCCACATGTTGGCCAGGTTGAAGCCATTGACCCAGTaGTGGTTGATGGAGATGGTGTCATCCAGGTTGTGC +
Preference number: 6 (lower is better)
Translates to: RHMLARLKPLTQ*WLMEMVSSRLC
Trigger: GCACAACCTGGATGACACCATCTCCATCAACCACAACTGGGTCAATGGCTTCAACCTGGCCAACATGTGGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS CAA 72 bp AGCTCCTGCTGCAAGAAGCGCCACATGTTGGCCAGGTaGAAGCCATTGACCCAGTTGTGGTTGATGGAGATG +
Preference number: 6 (lower is better)
Translates to: SSCCKKRHMLAR*KPLTQLWLMEM
Trigger: CATCTCCATCAACCACAACTGGGTCAATGGCTTCAACCTGGCCAACATGTGGCGCTTCTTGCAGCAGGAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438896.3
ENST00000485807.1
ENST00000620518.5
CDS CCA 72 bp CACATGTTGGCCAGGTTGAAGCCATTGACCCAGTTGTaGTTGATGGAGATGGTGTCATCCAGGTTGTGCACC +
Preference number: 6 (lower is better)
Translates to: HMLARLKPLTQL*LMEMVSSRLCT
Trigger: GGTGCACAACCTGGATGACACCATCTCCATCAACCACAACTGGGTCAATGGCTTCAACCTGGCCAACATGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS CAA 72 bp ATGTTGGCCAGGTTGAAGCCATTGACCCAGTTGTGGTaGATGGAGATGGTGTCATCCAGGTTGTGCACCTGG +
Preference number: 6 (lower is better)
Translates to: MLARLKPLTQLW*MEMVSSRLCTW
Trigger: CCAGGTGCACAACCTGGATGACACCATCTCCATCAACCACAACTGGGTCAATGGCTTCAACCTGGCCAACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438896.3
ENST00000620518.5
CDS CAA 72 bp ATGTTGGCCAGGTTGAAGCCATTGACCCAGTTGTGGTaGATGGAGATGGTGTCATCCTGGAAGGGGCACAGT +
Preference number: 6 (lower is better)
Translates to: MLARLKPLTQLW*MEMVSSWKGHS
Trigger: ACTGTGCCCCTTCCAGGATGACACCATCTCCATCAACCACAACTGGGTCAATGGCTTCAACCTGGCCAACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485807.1
CDS TCA 72 bp ATCTGGAGTGAGGTATGCAAAAGGAGTCATGGTCATTaGCTATGGAGTCATCGATGCCGGCTGCAGTTCAGC +
Preference number: 6 (lower is better)
Translates to: IWSEVCKRSHGH*LWSHRCRLQFS
Trigger: GCTGAACTGCAGCCGGCATCGATGACTCCATAGTCAATGACCATGACTCCTTTTGCATACCTCACTCCAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485807.1