RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for JMJD1C (Homo sapiens)

Ensembl gene IDs: ENSG00000171988

Ensembl transcript IDs: ENST00000327520.7, ENST00000399262.7, ENST00000402544.5, ENST00000467356.5, ENST00000469152.5, ENST00000483298.1, ENST00000489372.4, ENST00000490669.1, ENST00000497922.1, ENST00000542921.5, ENST00000633035.1, ENST00000639129.1

Found 822 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTAATATCTGGCTCAAGAACAGATCAGTCTTTTATTAACAGGGAATaGAGGCACACTACCAACTGGGAACAAATCACCATTCAAAACCCT +
Preference number: 1 (lower is better)
Translates to: LISGSRTDQSFINRE*RHTTNWEQITIQNP
Trigger: AGGGTTTTGAATGGTGATTTGTTCCCAGTTGGTAGTGTGCCTCCATTCCCTGTTAATAAAAGACTGATCTGTTCTTGAGCCAGATATTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327520.7
3UTR GCA 90 bp AATTCTGCTTGTTTTATAACATTGAATCACAGGAGCTGTGACATATaGTATACTGCTGTGGTGTCAGTAACAAGTAATTACTACAAAGAG +
Preference number: 1 (lower is better)
Translates to: NSACFITLNHRSCDI*YTAVVSVTSNYYKE
Trigger: CTCTTTGTAGTAATTACTTGTTACTGACACCACAGCAGTATAGCATATGTCACAGCTCCTGTGATTCAATGTTATAAAACAAGCAGAATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
3UTR-3UTR GCA 90 bp GTGCGATTCAGCAATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTAGGAGCTGTGACATATaGTATACTGCTGTGGTGTCA +
Preference number: 2 (lower is better)
Translates to: VRFSNFPDAGNSWCLCPIRSCDI*YTAVVS
Trigger: TGACACCACAGCAGTATAGCATATGTCACAGCTCCT...AATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATTGCTGAATCGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
3UTR-3UTR TCA 90 bp ACAGATCAGTCTTTTATTAACAGGGAATGGAGGCACACTACCAACTGGGAACAAAAGGTACGGCAACAATaGATAAGTCCTTGCTTGAGG +
Preference number: 2 (lower is better)
Translates to: TDQSFINREWRHTTNWEQKVRQQ*ISPCLR
Trigger: CCTCAAGCAAGGACTTATTCATTGTTGCCGTACCTT...TTGTTCCCAGTTGGTAGTGTGCCTCCATTCCCTGTTAATAAAAGACTGATCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327520.7
3UTR-3UTR GCA 90 bp AATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTCTCACAGTAACTAGGAGCTGTGACATATaGTATACTGCTGTGGTGTCA +
Preference number: 2 (lower is better)
Translates to: NFPDAGNSWCLCPILTVTRSCDI*YTAVVS
Trigger: TGACACCACAGCAGTATAGCATATGTCACAGCTCCT...AGTTACTGTGAGAATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
3UTR-3UTR TCA 90 bp AAGTATCATAGTATCAGATGTGATAGAGTAGAATCATTCCCTAGGTCAGCAGCCTTGTTGAATGCCAAGTaGAGGTACGGCAACAATGAA +
Preference number: 2 (lower is better)
Translates to: KYHSIRCDRVESFPRSAALLNAK*RYGNNE
Trigger: TTCATTGTTGCCGTACCTTCACTTGGCATTCAACAA...GGCTGCTGACCTAGGGAATGATTCTACTCTATCACATCTGATACTATGATACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327520.7
3UTR-3UTR TCA 90 bp CTTTTATTAACAGGGAATGGAGGCACACTACCAACTGGGAACAAATCACCATTCATGGTCTTATATTGTTaGATGCCAAGTGAAGGTACG +
Preference number: 2 (lower is better)
Translates to: LLLTGNGGTLPTGNKSPFMVLYC*MPSEGT
Trigger: CGTACCTTCACTTGGCATTCAACAATATAAGACCAT...GAATGGTGATTTGTTCCCAGTTGGTAGTGTGCCTCCATTCCCTGTTAATAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327520.7
3UTR-3UTR TCA 90 bp ATAACATTGAATCACAGGAGCTGTGACATATGCTATACTGCTGTGGTGTCAGTAGCACTGATGGTTTTATaGAGCTTAAAGTCAGTGTGC +
Preference number: 2 (lower is better)
Translates to: ITLNHRSCDICYTAVVSVALMVL*SLKSVC
Trigger: GCACACTGACTTTAAGCTTCATAAAACCATCAGTGC...TACTGACACCACAGCAGTATAGCATATGTCACAGCTCCTGTGATTCAATGTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
3UTR-3UTR TCA 90 bp GTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCAGTGAATCACAGGAGCTGTaGCATATGCTATACTGCTGT +
Preference number: 2 (lower is better)
Translates to: VFVSYSHSNCLNVVKNISESQEL*HMLYCC
Trigger: ACAGCAGTATAGCATATGTCACAGCTCCTGTGATTC...ACTGATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
3UTR-3UTR GCA 90 bp ATAGCTACTTTTCGCCACCCAACTAATATCTGGCTCAAGAACAGATCAGTCTTTTCTTATATTGTTGAATaGCAAGTGAAGGTACGGCAA +
Preference number: 2 (lower is better)
Translates to: IATFRHPTNIWLKNRSVFSYIVE*QVKVRQ
Trigger: TTGCCGTACCTTCACTTGGCATTCAACAATATAAGA...AAAGACTGATCTGTTCTTGAGCCAGATATTAGTTGGGTGGCGAAAAGTAGCTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327520.7
3UTR CCA 72 bp GTGCGATTCAGCAATTTCCCAGATGCAGGCAATAGCTaGTGTTTGTGTCCTATTCTCACAGTAACTGTCTCA +
Preference number: 3 (lower is better)
Translates to: VRFSNFPDAGNS*CLCPILTVTVS
Trigger: TGAGACAGTTACTGTGAGAATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATTGCTGAATCGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
3UTR CCA 72 bp GGCTCAAGAACAGATCAGTCTTTTATTAACAGGGAATaGAGGCACACTACCAACTGGGAACAAATCACCATT +
Preference number: 3 (lower is better)
Translates to: GSRTDQSFINRE*RHTTNWEQITI
Trigger: AATGGTGATTTGTTCCCAGTTGGTAGTGTGCCTCCATTCCCTGTTAATAAAAGACTGATCTGTTCTTGAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327520.7
3UTR-3UTR CAA 90 bp TTTATTAACAGGGAATGGAGGCACACTACCAACTGGGAACAAATCACCATTCAAACAATGAATAAGTCCTaGCTTGAGGGGAAGAGATAT +
Preference number: 3 (lower is better)
Translates to: FINREWRHTTNWEQITIQTMNKS*LEGKRY
Trigger: ATATCTCTTCCCCTCAAGCAAGGACTTATTCATTGT...TTGAATGGTGATTTGTTCCCAGTTGGTAGTGTGCCTCCATTCCCTGTTAATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327520.7
3UTR-3UTR CAA 90 bp ACAGATCAGTCTTTTATTAACAGGGAATGGAGGCACACTACCAACTGGGAACAAAAGAGAAACAGGGTTTaGACTTTCAACAAAAACTCC +
Preference number: 3 (lower is better)
Translates to: TDQSFINREWRHTTNWEQKRNRV*TFNKNS
Trigger: GGAGTTTTTGTTGAAAGTCAAAACCCTGTTTCTCTT...TTGTTCCCAGTTGGTAGTGTGCCTCCATTCCCTGTTAATAAAAGACTGATCTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327520.7
3UTR TCA 72 bp TTCTGCTTGTTTTATAACATTGAATCACAGGAGCTGTaGCATATGCTATACTGCTGTGGTGTCAGTAACAAG +
Preference number: 3 (lower is better)
Translates to: FCLFYNIESQEL*HMLYCCGVSNK
Trigger: CTTGTTACTGACACCACAGCAGTATAGCATATGTCACAGCTCCTGTGATTCAATGTTATAAAACAAGCAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
3UTR TCA 72 bp TATATTGTTGAATGCCAAGTGAAGGTACGGCAACAATaGATAAGTCCTTGCTTGAGGGGAAGAGATATTATT +
Preference number: 3 (lower is better)
Translates to: YIVECQVKVRQQ*ISPCLRGRDII
Trigger: AATAATATCTCTTCCCCTCAAGCAAGGACTTATTCATTGTTGCCGTACCTTCACTTGGCATTCAACAATATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327520.7
3UTR TCA 72 bp ACAGACTTTCAAAGAGGAGCAAGAGAAACAGGGTTTTaGCTTTCAACAAAAACTCCCATCTACTTTGAAGTA +
Preference number: 3 (lower is better)
Translates to: TDFQRGARETGF*LSTKTPIYFEV
Trigger: TACTTCAAAGTAGATGGGAGTTTTTGTTGAAAGTCAAAACCCTGTTTCTCTTGCTCCTCTTTGAAAGTCTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327520.7
3UTR TCA 72 bp TTACAATTATTTGGCAGTAATTTTCTGATTATGACATaGCTGCTGTGCGATTCAGCAATTTCCCAGATGCAG +
Preference number: 3 (lower is better)
Translates to: LQLFGSNFLIMT*LLCDSAISQMQ
Trigger: CTGCATCTGGGAAATTGCTGAATCGCACAGCAGTCATGTCATAATCAGAAAATTACTGCCAAATAATTGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399262.7
ENST00000639129.1
3UTR GCA 72 bp TGTTTTATAACATTGAATCACAGGAGCTGTGACATATaGTATACTGCTGTGGTGTCAGTAACAAGTAATTAC +
Preference number: 3 (lower is better)
Translates to: CFITLNHRSCDI*YTAVVSVTSNY
Trigger: GTAATTACTTGTTACTGACACCACAGCAGTATAGCATATGTCACAGCTCCTGTGATTCAATGTTATAAAACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR GCA 90 bp GTGCGATTCAGCAATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTTGCCGAAGCGGCCGCTaGCTCCTCCAGTGCGAGGGA +
Preference number: 4 (lower is better)
Translates to: VRFSNFPDAGNSWCLCPICRSGR*LLQCEG
Trigger: TCCCTCGCACTGGAGGAGGCAGCGGCCGCTTCGGCA...AATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATTGCTGAATCGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399262.7
CDS-3UTR GCA 90 bp GTGCGATTCAGCAATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTCGCCATAGCTGTCGCTaGCGAAGCGGCCGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: VRFSNFPDAGNSWCLCPIRHSCR*RSGRCL
Trigger: GAGGCAGCGGCCGCTTCGGCAGCGACAGCTATGGCG...AATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATTGCTGAATCGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399262.7
CDS-3UTR GCA 90 bp GACATGACTGCTGTGCGATTCAGCAATTTCCCAGATGCAGGCAATAGCTGGTGTCCGCCAGGTCCGGATTaGGGCTGTCCCTGTGTGACA +
Preference number: 4 (lower is better)
Translates to: DMTAVRFSNFPDAGNSWCPPGPD*GCPCVT
Trigger: TGTCACACAGGGACAGCCGCAATCCGGACCTGGCGG...ACACCAGCTATTGCCTGCATCTGGGAAATTGCTGAATCGCACAGCAGTCATGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399262.7
CDS-3UTR TCA 90 bp GACATGACTGCTGTGCGATTCAGCAATTTCCCAGATGCAGGCAATAGCTGGTGTGTCACAGGGGTGGGCTaGTGTAGCCAAGGACTGGGA +
Preference number: 4 (lower is better)
Translates to: DMTAVRFSNFPDAGNSWCVTGVG*CSQGLG
Trigger: TCCCAGTCCTTGGCTACATCAGCCCACCCCTGTGAC...ACACCAGCTATTGCCTGCATCTGGGAAATTGCTGAATCGCACAGCAGTCATGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399262.7
ENST00000639129.1
CDS-3UTR TCA 90 bp AATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTCTCACAGTAACTGTGACACGGCTCGGATaGCCCCCGCTCGCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: NFPDAGNSWCLCPILTVTVTRLG*PPLASF
Trigger: GAAGCTGGCGAGCGGGGGTCATCCGAGCCGTGTCAC...AGTTACTGTGAGAATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399262.7
CDS-3UTR TCA 90 bp GTGCGATTCAGCAATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTGTCACAGGGGTGGGCTaGTGTAGCCAAGGACTGGGA +
Preference number: 4 (lower is better)
Translates to: VRFSNFPDAGNSWCLCPIVTGVG*CSQGLG
Trigger: TCCCAGTCCTTGGCTACATCAGCCCACCCCTGTGAC...AATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATTGCTGAATCGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR GCA 90 bp GTGCGATTCAGCAATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTCGCTGCCTCCTCCAGTaGGAGGGAACCGATGAAACC +
Preference number: 4 (lower is better)
Translates to: VRFSNFPDAGNSWCLCPIRCLLQ*EGTDET
Trigger: GGTTTCATCGGTTCCCTCGCACTGGAGGAGGCAGCG...AATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATTGCTGAATCGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399262.7
CDS-3UTR CCA 90 bp GACATGACTGCTGTGCGATTCAGCAATTTCCCAGATGCAGGCAATAGCTGGTGTCCGCAAACACTCCTTTaGACTCCCAGATTCGCAGCC +
Preference number: 4 (lower is better)
Translates to: DMTAVRFSNFPDAGNSWCPQTLL*TPRFAA
Trigger: GGCTGCGAATCTGGGAGTCCAAAGGAGTGTTTGCGG...ACACCAGCTATTGCCTGCATCTGGGAAATTGCTGAATCGCACAGCAGTCATGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399262.7
CDS-3UTR CCA 90 bp GACATGACTGCTGTGCGATTCAGCAATTTCCCAGATGCAGGCAATAGCTGGTGTCTCTCTAGTCGTGGGTaGCCACCAAGTAAGGAGGCA +
Preference number: 4 (lower is better)
Translates to: DMTAVRFSNFPDAGNSWCLSSRG*PPSKEA
Trigger: TGCCTCCTTACTTGGTGGCCACCCACGACTAGAGAG...ACACCAGCTATTGCCTGCATCTGGGAAATTGCTGAATCGCACAGCAGTCATGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399262.7
ENST00000639129.1
CDS-3UTR TCA 90 bp GACATGACTGCTGTGCGATTCAGCAATTTCCCAGATGCAGGCAATAGCTGGTGTACTTGGGGCTCCCATTaGATATACTGGGGCAAAGGC +
Preference number: 4 (lower is better)
Translates to: DMTAVRFSNFPDAGNSWCTWGSH*IYWGKG
Trigger: GCCTTTGCCCCAGTATATTCAATGGGAGCCCCAAGT...ACACCAGCTATTGCCTGCATCTGGGAAATTGCTGAATCGCACAGCAGTCATGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399262.7
ENST00000639129.1
CDS-3UTR TCA 90 bp GTGCGATTCAGCAATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTCTCAAGCTGCTGGCATaGGCACTCTCTAGTCGTGGG +
Preference number: 4 (lower is better)
Translates to: VRFSNFPDAGNSWCLCPILKLLA*ALSSRG
Trigger: CCCACGACTAGAGAGTGCTCATGCCAGCAGCTTGAG...AATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATTGCTGAATCGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CCA 90 bp GACATGACTGCTGTGCGATTCAGCAATTTCCCAGATGCAGGCAATAGCTGGTGTAGTGGCTCAAGCTGCTaGCATGAGCACTCTCTAGTC +
Preference number: 4 (lower is better)
Translates to: DMTAVRFSNFPDAGNSWCSGSSC*HEHSLV
Trigger: GACTAGAGAGTGCTCATGCCAGCAGCTTGAGCCACT...ACACCAGCTATTGCCTGCATCTGGGAAATTGCTGAATCGCACAGCAGTCATGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399262.7
ENST00000639129.1
CDS-3UTR TCA 90 bp GACATGACTGCTGTGCGATTCAGCAATTTCCCAGATGCAGGCAATAGCTGGTGTGCTTGTCCAAGAAGATaGGGTGACTGGTGCTGTAAC +
Preference number: 4 (lower is better)
Translates to: DMTAVRFSNFPDAGNSWCACPRR*GDWCCN
Trigger: GTTACAGCACCAGTCACCTCATCTTCTTGGACAAGC...ACACCAGCTATTGCCTGCATCTGGGAAATTGCTGAATCGCACAGCAGTCATGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399262.7
ENST00000639129.1
CDS-3UTR TCA 90 bp GACATGACTGCTGTGCGATTCAGCAATTTCCCAGATGCAGGCAATAGCTGGTGTATTTTAAGAGGCCGATaGGGCTCTGCACTGGAAGGT +
Preference number: 4 (lower is better)
Translates to: DMTAVRFSNFPDAGNSWCILRGR*GSALEG
Trigger: ACCTTCCAGTGCAGAGCCTCATCGGCCTCTTAAAAT...ACACCAGCTATTGCCTGCATCTGGGAAATTGCTGAATCGCACAGCAGTCATGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399262.7
ENST00000639129.1
CDS-3UTR GCA 90 bp GTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCAGTCCAGCGCTCCGAACGTaGCTCGTCGCCGACCGCCAC +
Preference number: 4 (lower is better)
Translates to: VFVSYSHSNCLNVVKNISPALRT*LVADRH
Trigger: GTGGCGGTCGGCGACGAGGCACGTTCGGAGCGCTGG...ACTGATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399262.7
CDS-3UTR TCA 90 bp GTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCAGTACCGGCCGCTCATGCTaGGGAGAGCGGACCGGGACA +
Preference number: 4 (lower is better)
Translates to: VFVSYSHSNCLNVVKNISTGRSC*GERTGT
Trigger: TGTCCCGGTCCGCTCTCCTCAGCATGAGCGGCCGGT...ACTGATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399262.7
CDS-3UTR TCA 90 bp ACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATTCAAGGGCGGCTGTCCCTGTGTaGCACGGCTCGGATGACCCC +
Preference number: 4 (lower is better)
Translates to: TDGFMKLKVSVHTYHHSRAAVPV*HGSDDP
Trigger: GGGGTCATCCGAGCCGTGTCACACAGGGACAGCCGC...CCTTGAATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399262.7
CDS-3UTR TCA 90 bp AATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTCTCACAGTAACTGCTGCGGGTTGTCCCTaGGAACTGGGTTTAGGCTGT +
Preference number: 4 (lower is better)
Translates to: NFPDAGNSWCLCPILTVTAAGCP*ELGLGC
Trigger: ACAGCCTAAACCCAGTTCTCAGGGACAACCCGCAGC...AGTTACTGTGAGAATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399262.7
ENST00000542921.5
CDS-3UTR TCA 90 bp GTGCGATTCAGCAATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTGGCTGTGAACAGCGTTaGCGTTTTGATTGGCACGAG +
Preference number: 4 (lower is better)
Translates to: VRFSNFPDAGNSWCLCPIGCEQR*RFDWHE
Trigger: CTCGTGCCAATCAAAACGTCAACGCTGTTCACAGCC...AATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATTGCTGAATCGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR GCA 90 bp GACATGACTGCTGTGCGATTCAGCAATTTCCCAGATGCAGGCAATAGCTGGTGTCCGGACTCCTCTCACTaGTCTTTTCCAGGCAATTTT +
Preference number: 4 (lower is better)
Translates to: DMTAVRFSNFPDAGNSWCPDSSH*SFPGNF
Trigger: AAAATTGCCTGGAAAAGAGCAGTGAGAGGAGTCCGG...ACACCAGCTATTGCCTGCATCTGGGAAATTGCTGAATCGCACAGCAGTCATGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399262.7
ENST00000639129.1
CDS-3UTR GCA 90 bp GACATGACTGCTGTGCGATTCAGCAATTTCCCAGATGCAGGCAATAGCTGGTGTAGATCTGCTAACCAGTaGAGTGGTGACTGGGATTCT +
Preference number: 4 (lower is better)
Translates to: DMTAVRFSNFPDAGNSWCRSANQ*SGDWDS
Trigger: AGAATCCCAGTCACCACTGCACTGGTTAGCAGATCT...ACACCAGCTATTGCCTGCATCTGGGAAATTGCTGAATCGCACAGCAGTCATGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399262.7
ENST00000639129.1
CDS-3UTR GCA 90 bp GTGCGATTCAGCAATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTTTCGCAGCCTTGTGCTaGAGCGCCACACAAGAAAAC +
Preference number: 4 (lower is better)
Translates to: VRFSNFPDAGNSWCLCPIFAALC*SATQEN
Trigger: GTTTTCTTGTGTGGCGCTGCAGCACAAGGCTGCGAA...AATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATTGCTGAATCGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399262.7
CDS-3UTR GCA 90 bp GTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCAGTACGAACCGGCCGCTCTaGCCCGGACACAGCGACCTC +
Preference number: 4 (lower is better)
Translates to: VFVSYSHSNCLNVVKNISTNRPL*PGHSDL
Trigger: GAGGTCGCTGTGTCCGGGGCAGAGCGGCCGGTTCGT...ACTGATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399262.7
CDS-3UTR GCA 90 bp ATAACATTGAATCACAGGAGCTGTGACATATGCTATACTGCTGTGGTGTCAGTACTTACCCACCAGCTCTaGCCGCGTCTCTACCGCCAT +
Preference number: 4 (lower is better)
Translates to: ITLNHRSCDICYTAVVSVLTHQL*PRLYRH
Trigger: ATGGCGGTAGAGACGCGGGCAGAGCTGGTGGGTAAG...TACTGACACCACAGCAGTATAGCATATGTCACAGCTCCTGTGATTCAATGTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399262.7
CDS-3UTR GCA 90 bp AATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTCTCACAGTAACTAGGCCGATGAGGCTCTaGACTGGAAGGTCTGACAGG +
Preference number: 4 (lower is better)
Translates to: NFPDAGNSWCLCPILTVTRPMRL*TGRSDR
Trigger: CCTGTCAGACCTTCCAGTGCAGAGCCTCATCGGCCT...AGTTACTGTGAGAATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CCA 90 bp GACATGACTGCTGTGCGATTCAGCAATTTCCCAGATGCAGGCAATAGCTGGTGTATGCCAGTAAACCACTaGGTGGCAGAGTCTTGTCTA +
Preference number: 4 (lower is better)
Translates to: DMTAVRFSNFPDAGNSWCMPVNH*VAESCL
Trigger: TAGACAAGACTCTGCCACCCAGTGGTTTACTGGCAT...ACACCAGCTATTGCCTGCATCTGGGAAATTGCTGAATCGCACAGCAGTCATGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399262.7
ENST00000639129.1
CDS-3UTR CCA 90 bp GTGCGATTCAGCAATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTAGTGGCTCAAGCTGCTaGCATGAGCACTCTCTAGTC +
Preference number: 4 (lower is better)
Translates to: VRFSNFPDAGNSWCLCPISGSSC*HEHSLV
Trigger: GACTAGAGAGTGCTCATGCCAGCAGCTTGAGCCACT...AATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATTGCTGAATCGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp GACATGACTGCTGTGCGATTCAGCAATTTCCCAGATGCAGGCAATAGCTGGTGTTTTATGTGCCCCAGCTaGAGATCTTTCACTAACACG +
Preference number: 4 (lower is better)
Translates to: DMTAVRFSNFPDAGNSWCFMCPS*RSFTNT
Trigger: CGTGTTAGTGAAAGATCTTCAGCTGGGGCACATAAA...ACACCAGCTATTGCCTGCATCTGGGAAATTGCTGAATCGCACAGCAGTCATGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399262.7
ENST00000639129.1
CDS-3UTR TCA 90 bp GACATGACTGCTGTGCGATTCAGCAATTTCCCAGATGCAGGCAATAGCTGGTGTTTACTACTTTTATACTaGGCTGCAGCCAATGCTGCC +
Preference number: 4 (lower is better)
Translates to: DMTAVRFSNFPDAGNSWCLLLLY*AAANAA
Trigger: GGCAGCATTGGCTGCAGCTCAGTATAAAAGTAGTAA...ACACCAGCTATTGCCTGCATCTGGGAAATTGCTGAATCGCACAGCAGTCATGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399262.7
ENST00000639129.1
CDS-3UTR TCA 90 bp GTGCGATTCAGCAATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTCTTTGGCACTCCTGCTaGGAACTCCATTGGGTTTCA +
Preference number: 4 (lower is better)
Translates to: VRFSNFPDAGNSWCLCPILWHSC*ELHWVS
Trigger: TGAAACCCAATGGAGTTCTCAGCAGGAGTGCCAAAG...AATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATTGCTGAATCGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp ATAACATTGAATCACAGGAGCTGTGACATATGCTATACTGCTGTGGTGTCAGTAGCTGCGGGTTGTCCCTaGGAACTGGGTTTAGGCTGT +
Preference number: 4 (lower is better)
Translates to: ITLNHRSCDICYTAVVSVAAGCP*ELGLGC
Trigger: ACAGCCTAAACCCAGTTCTCAGGGACAACCCGCAGC...TACTGACACCACAGCAGTATAGCATATGTCACAGCTCCTGTGATTCAATGTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399262.7
ENST00000542921.5
CDS-3UTR TCA 90 bp GACATGACTGCTGTGCGATTCAGCAATTTCCCAGATGCAGGCAATAGCTGGTGTTGGTATACTGCTATCTaGGCCCTTCCTCTTATTTGG +
Preference number: 4 (lower is better)
Translates to: DMTAVRFSNFPDAGNSWCWYTAI*ALPLIW
Trigger: CCAAATAAGAGGAAGGGCTCAGATAGCAGTATACCA...ACACCAGCTATTGCCTGCATCTGGGAAATTGCTGAATCGCACAGCAGTCATGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399262.7
ENST00000639129.1
CDS-3UTR TCA 90 bp GTGCGATTCAGCAATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTCAGGTCATTTTTGGCTaGTGTGGATGCAACAGACCG +
Preference number: 4 (lower is better)
Translates to: VRFSNFPDAGNSWCLCPIQVIFG*CGCNRP
Trigger: CGGTCTGTTGCATCCACATCAGCCAAAAATGACCTG...AATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATTGCTGAATCGCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR GCA 90 bp GACATGACTGCTGTGCGATTCAGCAATTTCCCAGATGCAGGCAATAGCTGGTGTTACTACAGATTACAGTaGTATCCAGAGGAAGGGAGG +
Preference number: 4 (lower is better)
Translates to: DMTAVRFSNFPDAGNSWCYYRLQ*YPEEGR
Trigger: CCTCCCTTCCTCTGGATAGCACTGTAATCTGTAGTA...ACACCAGCTATTGCCTGCATCTGGGAAATTGCTGAATCGCACAGCAGTCATGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399262.7
ENST00000639129.1
CDS-3UTR GCA 90 bp GTGCGATTCAGCAATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTCACACCAGAAACCACTaGAGGCTGTCCTTGTTTCCA +
Preference number: 4 (lower is better)
Translates to: VRFSNFPDAGNSWCLCPIHTRNH*RLSLFP
Trigger: TGGAAACAAGGACAGCCTGCAGTGGTTTCTGGTGTG...AATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATTGCTGAATCGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR GCA 90 bp GACATGACTGCTGTGCGATTCAGCAATTTCCCAGATGCAGGCAATAGCTGGTGTGGTGGACTTCGCTTATaGAGCTTATCTTCCATGACA +
Preference number: 4 (lower is better)
Translates to: DMTAVRFSNFPDAGNSWCGGLRL*SLSSMT
Trigger: TGTCATGGAAGATAAGCTGCATAAGCGAAGTCCACC...ACACCAGCTATTGCCTGCATCTGGGAAATTGCTGAATCGCACAGCAGTCATGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399262.7
ENST00000639129.1
CDS-3UTR CCA 90 bp GACATGACTGCTGTGCGATTCAGCAATTTCCCAGATGCAGGCAATAGCTGGTGTTTGGTGTGGGTGGTCTaGATACAAACTTCTCCTTTG +
Preference number: 4 (lower is better)
Translates to: DMTAVRFSNFPDAGNSWCLVWVV*IQTSPL
Trigger: CAAAGGAGAAGTTTGTATCCAGACCACCCACACCAA...ACACCAGCTATTGCCTGCATCTGGGAAATTGCTGAATCGCACAGCAGTCATGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399262.7
ENST00000639129.1
CDS-3UTR CCA 90 bp ATAACATTGAATCACAGGAGCTGTGACATATGCTATACTGCTGTGGTGTCAGTACTGAGGTCACAGGGGTaGGCTGATGTAGCCAAGGAC +
Preference number: 4 (lower is better)
Translates to: ITLNHRSCDICYTAVVSVLRSQG*ADVAKD
Trigger: GTCCTTGGCTACATCAGCCCACCCCTGTGACCTCAG...TACTGACACCACAGCAGTATAGCATATGTCACAGCTCCTGTGATTCAATGTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CCA 90 bp GACATGACTGCTGTGCGATTCAGCAATTTCCCAGATGCAGGCAATAGCTGGTGTGATGCAGGCAATAGCTaGTGTTTGTGTCCTATTCTC +
Preference number: 4 (lower is better)
Translates to: DMTAVRFSNFPDAGNSWCDAGNS*CLCPIL
Trigger: GAGAATAGGACACAAACACCAGCTATTGCCTGCATC...ACACCAGCTATTGCCTGCATCTGGGAAATTGCTGAATCGCACAGCAGTCATGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399262.7
ENST00000639129.1
CDS-3UTR TCA 90 bp GACATGACTGCTGTGCGATTCAGCAATTTCCCAGATGCAGGCAATAGCTGGTGTTCACATTTGGCAAAATaGTTCTTCCAGTTTCTCCGG +
Preference number: 4 (lower is better)
Translates to: DMTAVRFSNFPDAGNSWCSHLAK*FFQFLR
Trigger: CCGGAGAAACTGGAAGAATCATTTTGCCAAATGTGA...ACACCAGCTATTGCCTGCATCTGGGAAATTGCTGAATCGCACAGCAGTCATGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399262.7
ENST00000639129.1
CDS-3UTR TCA 90 bp AATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTCTCACAGTAACTTACAGCAGACATGACTaGACTGGGAACACTGCCCTG +
Preference number: 4 (lower is better)
Translates to: NFPDAGNSWCLCPILTVTYSRHD*TGNTAL
Trigger: CAGGGCAGTGTTCCCAGTTCAGTCATGTCTGCTGTA...AGTTACTGTGAGAATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp GTGCGATTCAGCAATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTGCTTTCACTTTCATCTaGGTCTCCACTTTCAGAGCC +
Preference number: 4 (lower is better)
Translates to: VRFSNFPDAGNSWCLCPIAFTFI*VSTFRA
Trigger: GGCTCTGAAAGTGGAGACTCAGATGAAAGTGAAAGC...AATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATTGCTGAATCGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp AATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTCTCACAGTAACTACTTGGGGCTCCCATTaGATATACTGGGGCAAAGGC +
Preference number: 4 (lower is better)
Translates to: NFPDAGNSWCLCPILTVTTWGSH*IYWGKG
Trigger: GCCTTTGCCCCAGTATATTCAATGGGAGCCCCAAGT...AGTTACTGTGAGAATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp GTGCGATTCAGCAATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTTTATCTTCCTGTATTTaGTCCCAGGGAGGCTGGCTA +
Preference number: 4 (lower is better)
Translates to: VRFSNFPDAGNSWCLCPILSSCI*SQGGWL
Trigger: TAGCCAGCCTCCCTGGGATCAAATACAGGAAGATAA...AATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATTGCTGAATCGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp GACATGACTGCTGTGCGATTCAGCAATTTCCCAGATGCAGGCAATAGCTGGTGTTTCTTTGGATGGGTATaGTCTTGGTGGTTCATTGAC +
Preference number: 4 (lower is better)
Translates to: DMTAVRFSNFPDAGNSWCFFGWV*SWWFID
Trigger: GTCAATGAACCACCAAGATCATACCCATCCAAAGAA...ACACCAGCTATTGCCTGCATCTGGGAAATTGCTGAATCGCACAGCAGTCATGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399262.7
ENST00000639129.1
CDS-3UTR TCA 90 bp AATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTCTCACAGTAACTCAAACCAAGCATTTCTaGGCTCACTTGCAGCGGCGT +
Preference number: 4 (lower is better)
Translates to: NFPDAGNSWCLCPILTVTQTKHF*AHLQRR
Trigger: ACGCCGCTGCAAGTGAGCTCAGAAATGCTTGGTTTG...AGTTACTGTGAGAATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542921.5
CDS-3UTR GCA 90 bp ACAGATCAGTCTTTTATTAACAGGGAATGGAGGCACACTACCAACTGGGAACAACTGAACTGGGAACACTaGCCTGTGAGACAGCCTGAA +
Preference number: 4 (lower is better)
Translates to: TDQSFINREWRHTTNWEQLNWEH*PVRQPE
Trigger: TTCAGGCTGTCTCACAGGGCAGTGTTCCCAGTTCAG...TTGTTCCCAGTTGGTAGTGTGCCTCCATTCCCTGTTAATAAAAGACTGATCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327520.7
CDS-3UTR GCA 90 bp GTGCGATTCAGCAATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTCCGGACTCCTCTCACTaGTCTTTTCCAGGCAATTTT +
Preference number: 4 (lower is better)
Translates to: VRFSNFPDAGNSWCLCPIPDSSH*SFPGNF
Trigger: AAAATTGCCTGGAAAAGAGCAGTGAGAGGAGTCCGG...AATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATTGCTGAATCGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR GCA 90 bp GACATGACTGCTGTGCGATTCAGCAATTTCCCAGATGCAGGCAATAGCTGGTGTTTAACTTGTTATCTGTaGCTACATCACTCTCTGGGC +
Preference number: 4 (lower is better)
Translates to: DMTAVRFSNFPDAGNSWCLTCYL*LHHSLG
Trigger: GCCCAGAGAGTGATGTAGGCACAGATAACAAGTTAA...ACACCAGCTATTGCCTGCATCTGGGAAATTGCTGAATCGCACAGCAGTCATGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399262.7
ENST00000639129.1
CDS-3UTR GCA 90 bp GACATGACTGCTGTGCGATTCAGCAATTTCCCAGATGCAGGCAATAGCTGGTGTCGGATACTTCTTTGTTaGTGTTGCTGGTGTGTATTC +
Preference number: 4 (lower is better)
Translates to: DMTAVRFSNFPDAGNSWCRILLC*CCWCVF
Trigger: GAATACACACCAGCAACAGCAACAAAGAAGTATCCG...ACACCAGCTATTGCCTGCATCTGGGAAATTGCTGAATCGCACAGCAGTCATGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399262.7
ENST00000639129.1
CDS-3UTR GCA 90 bp GACATGACTGCTGTGCGATTCAGCAATTTCCCAGATGCAGGCAATAGCTGGTGTAGCTTCAGCATTAACTaGATTTTCTGGGTGAACCCA +
Preference number: 4 (lower is better)
Translates to: DMTAVRFSNFPDAGNSWCSFSIN*IFWVNP
Trigger: TGGGTTCACCCAGAAAATGCAGTTAATGCTGAAGCT...ACACCAGCTATTGCCTGCATCTGGGAAATTGCTGAATCGCACAGCAGTCATGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399262.7
ENST00000639129.1
CDS-3UTR GCA 90 bp AATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTCTCACAGTAACTCAGCTGAAGCACTACTaGATCCTCCGATCTGGGTCA +
Preference number: 4 (lower is better)
Translates to: NFPDAGNSWCLCPILTVTQLKHY*ILRSGS
Trigger: TGACCCAGATCGGAGGATGCAGTAGTGCTTCAGCTG...AGTTACTGTGAGAATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542921.5
CDS-3UTR CCA 90 bp ACAGATCAGTCTTTTATTAACAGGGAATGGAGGCACACTACCAACTGGGAACAAAGGCACTGCACAACCTaGGTCCTAGATCAGGACGTA +
Preference number: 4 (lower is better)
Translates to: TDQSFINREWRHTTNWEQRHCTT*VLDQDV
Trigger: TACGTCCTGATCTAGGACCCAGGTTGTGCAGTGCCT...TTGTTCCCAGTTGGTAGTGTGCCTCCATTCCCTGTTAATAAAAGACTGATCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327520.7
CDS-3UTR CCA 90 bp GTGCGATTCAGCAATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTATGCCAGTAAACCACTaGGTGGCAGAGTCTTGTCTA +
Preference number: 4 (lower is better)
Translates to: VRFSNFPDAGNSWCLCPIMPVNH*VAESCL
Trigger: TAGACAAGACTCTGCCACCCAGTGGTTTACTGGCAT...AATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATTGCTGAATCGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CCA 90 bp ATAACATTGAATCACAGGAGCTGTGACATATGCTATACTGCTGTGGTGTCAGTACTCTCTAGTCGTGGGTaGCCACCAAGTAAGGAGGCA +
Preference number: 4 (lower is better)
Translates to: ITLNHRSCDICYTAVVSVLSSRG*PPSKEA
Trigger: TGCCTCCTTACTTGGTGGCCACCCACGACTAGAGAG...TACTGACACCACAGCAGTATAGCATATGTCACAGCTCCTGTGATTCAATGTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CCA 90 bp GTGCGATTCAGCAATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTAACTGTTGTTGTTGCTaGTGTGCTAGCGCTAAGTGG +
Preference number: 4 (lower is better)
Translates to: VRFSNFPDAGNSWCLCPINCCCC*CASAKW
Trigger: CCACTTAGCGCTAGCACACCAGCAACAACAACAGTT...AATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATTGCTGAATCGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CCA 90 bp GACATGACTGCTGTGCGATTCAGCAATTTCCCAGATGCAGGCAATAGCTGGTGTCATTTTTGGCTGATGTaGATGCAACAGACCGTAATG +
Preference number: 4 (lower is better)
Translates to: DMTAVRFSNFPDAGNSWCHFWLM*MQQTVM
Trigger: CATTACGGTCTGTTGCATCCACATCAGCCAAAAATG...ACACCAGCTATTGCCTGCATCTGGGAAATTGCTGAATCGCACAGCAGTCATGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399262.7
ENST00000639129.1
CDS-3UTR CCA 90 bp GTGCGATTCAGCAATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTGCTGTGATGGATTGGTaGGTGAAATACTGGTGCTCT +
Preference number: 4 (lower is better)
Translates to: VRFSNFPDAGNSWCLCPIAVMDW*VKYWCS
Trigger: AGAGCACCAGTATTTCACCCACCAATCCATCACAGC...AATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATTGCTGAATCGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CCA 90 bp GACATGACTGCTGTGCGATTCAGCAATTTCCCAGATGCAGGCAATAGCTGGTGTCTCTTAAAATTTGCCTaGGAGTCTTTTGGTTCGGGT +
Preference number: 4 (lower is better)
Translates to: DMTAVRFSNFPDAGNSWCLLKFA*ESFGSG
Trigger: ACCCGAACCAAAAGACTCCCAGGCAAATTTTAAGAG...ACACCAGCTATTGCCTGCATCTGGGAAATTGCTGAATCGCACAGCAGTCATGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399262.7
ENST00000639129.1
CDS-3UTR TCA 90 bp GTGCGATTCAGCAATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTTTTATGTGCCCCAGCTaGAGATCTTTCACTAACACG +
Preference number: 4 (lower is better)
Translates to: VRFSNFPDAGNSWCLCPIFMCPS*RSFTNT
Trigger: CGTGTTAGTGAAAGATCTTCAGCTGGGGCACATAAA...AATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATTGCTGAATCGCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp ACAGATCAGTCTTTTATTAACAGGGAATGGAGGCACACTACCAACTGGGAACAAGGGAACACTGCCCTGTaGGACAGCCTGAAAGTTTTT +
Preference number: 4 (lower is better)
Translates to: TDQSFINREWRHTTNWEQGNTAL*DSLKVF
Trigger: AAAAACTTTCAGGCTGTCTCACAGGGCAGTGTTCCC...TTGTTCCCAGTTGGTAGTGTGCCTCCATTCCCTGTTAATAAAAGACTGATCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327520.7
CDS-3UTR TCA 90 bp TTTATTAACAGGGAATGGAGGCACACTACCAACTGGGAACAAATCACCATTCAATACAGCAGACATGACTaGACTGGGAACACTGCCCTG +
Preference number: 4 (lower is better)
Translates to: FINREWRHTTNWEQITIQYSRHD*TGNTAL
Trigger: CAGGGCAGTGTTCCCAGTTCAGTCATGTCTGCTGTA...TTGAATGGTGATTTGTTCCCAGTTGGTAGTGTGCCTCCATTCCCTGTTAATAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327520.7
CDS-3UTR TCA 90 bp GTGCGATTCAGCAATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTAACCCAGAACTGGGTTaGACAACACTTCCTGTCTTA +
Preference number: 4 (lower is better)
Translates to: VRFSNFPDAGNSWCLCPINPELG*TTLPVL
Trigger: TAAGACAGGAAGTGTTGTTCAACCCAGTTCTGGGTT...AATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATTGCTGAATCGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp GTGCGATTCAGCAATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTTTACTACTTTTATACTaGGCTGCAGCCAATGCTGCC +
Preference number: 4 (lower is better)
Translates to: VRFSNFPDAGNSWCLCPILLLLY*AAANAA
Trigger: GGCAGCATTGGCTGCAGCTCAGTATAAAAGTAGTAA...AATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATTGCTGAATCGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp ACAGATCAGTCTTTTATTAACAGGGAATGGAGGCACACTACCAACTGGGAACAACTTCTGAGTGTCTGGTaGGCCAGGCCTTTTTCAGTT +
Preference number: 4 (lower is better)
Translates to: TDQSFINREWRHTTNWEQLLSVW*ARPFSV
Trigger: AACTGAAAAAGGCCTGGCTCACCAGACACTCAGAAG...TTGTTCCCAGTTGGTAGTGTGCCTCCATTCCCTGTTAATAAAAGACTGATCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327520.7
CDS-3UTR TCA 90 bp GTGCGATTCAGCAATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTATTTTTATCTTCTTCTaGGTGTCTGGTGAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: VRFSNFPDAGNSWCLCPIIFIFF*VSGEPG
Trigger: GCCTGGCTCACCAGACACTCAGAAGAAGATAAAAAT...AATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATTGCTGAATCGCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp AATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTCTCACAGTAACTGGAGTATTTTGCTGCTaGGACTCAGGCATGCACAGA +
Preference number: 4 (lower is better)
Translates to: NFPDAGNSWCLCPILTVTGVFCC*DSGMHR
Trigger: TCTGTGCATGCCTGAGTCTCAGCAGCAAAATACTCC...AGTTACTGTGAGAATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp ATAGCTACTTTTCGCCACCCAACTAATATCTGGCTCAAGAACAGATCAGTCTTTACTTGGGGCTCCCATTaGATATACTGGGGCAAAGGC +
Preference number: 4 (lower is better)
Translates to: IATFRHPTNIWLKNRSVFTWGSH*IYWGKG
Trigger: GCCTTTGCCCCAGTATATTCAATGGGAGCCCCAAGT...AAAGACTGATCTGTTCTTGAGCCAGATATTAGTTGGGTGGCGAAAAGTAGCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327520.7
CDS-3UTR TCA 90 bp ACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATTCAAGGGTGCGAGGGAACCGATaGAACCTCACTCCTACCGGC +
Preference number: 4 (lower is better)
Translates to: TDGFMKLKVSVHTYHHSRVRGNR*NLTPTG
Trigger: GCCGGTAGGAGTGAGGTTTCATCGGTTCCCTCGCAC...CCTTGAATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399262.7
CDS-3UTR TCA 90 bp ATAACATTGAATCACAGGAGCTGTGACATATGCTATACTGCTGTGGTGTCAGTAACTTTCACTTCCTCATaGAGCTGCGGGTTGTCCCTG +
Preference number: 4 (lower is better)
Translates to: ITLNHRSCDICYTAVVSVTFTSS*SCGLSL
Trigger: CAGGGACAACCCGCAGCTTCATGAGGAAGTGAAAGT...TACTGACACCACAGCAGTATAGCATATGTCACAGCTCCTGTGATTCAATGTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399262.7
ENST00000542921.5
CDS-3UTR TCA 90 bp ATAACATTGAATCACAGGAGCTGTGACATATGCTATACTGCTGTGGTGTCAGTAACAGCGTTGACGTTTTaGTTGGCACGAGACCTGCGT +
Preference number: 4 (lower is better)
Translates to: ITLNHRSCDICYTAVVSVTALTF*LARDLR
Trigger: ACGCAGGTCTCGTGCCAATCAAAACGTCAACGCTGT...TACTGACACCACAGCAGTATAGCATATGTCACAGCTCCTGTGATTCAATGTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp AATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTCTCACAGTAACTGCTTGTCCAAGAAGATaGGGTGACTGGTGCTGTAAC +
Preference number: 4 (lower is better)
Translates to: NFPDAGNSWCLCPILTVTACPRR*GDWCCN
Trigger: GTTACAGCACCAGTCACCTCATCTTCTTGGACAAGC...AGTTACTGTGAGAATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp GTGCGATTCAGCAATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTAGGCAAACCAAGTCCTaGGTATGCATGTGTTCCATT +
Preference number: 4 (lower is better)
Translates to: VRFSNFPDAGNSWCLCPIRQTKS*VCMCSI
Trigger: AATGGAACACATGCATACTCAGGACTTGGTTTGCCT...AATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATTGCTGAATCGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp ACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATTCAAGGGTCACAGGGGTGGGCTaGTGTAGCCAAGGACTGGGA +
Preference number: 4 (lower is better)
Translates to: TDGFMKLKVSVHTYHHSRVTGVG*CSQGLG
Trigger: TCCCAGTCCTTGGCTACATCAGCCCACCCCTGTGAC...CCTTGAATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp AATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTCTCACAGTAACTATTTTAAGAGGCCGATaGGGCTCTGCACTGGAAGGT +
Preference number: 4 (lower is better)
Translates to: NFPDAGNSWCLCPILTVTILRGR*GSALEG
Trigger: ACCTTCCAGTGCAGAGCCTCATCGGCCTCTTAAAAT...AGTTACTGTGAGAATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp GACATGACTGCTGTGCGATTCAGCAATTTCCCAGATGCAGGCAATAGCTGGTGTACATCAATACTTTCTTaGAGAATTCGACGGTGTTCC +
Preference number: 4 (lower is better)
Translates to: DMTAVRFSNFPDAGNSWCTSILS*RIRRCS
Trigger: GGAACACCGTCGAATTCTTCAAGAAAGTATTGATGT...ACACCAGCTATTGCCTGCATCTGGGAAATTGCTGAATCGCACAGCAGTCATGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399262.7
ENST00000639129.1
CDS-3UTR TCA 90 bp GTGCGATTCAGCAATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTTCTTCAAGCAGCCTTTaGCGGAGCTTTTTGTTCACA +
Preference number: 4 (lower is better)
Translates to: VRFSNFPDAGNSWCLCPISSSSL*RSFLFT
Trigger: TGTGAACAAAAAGCTCCGTCAAAGGCTGCTTGAAGA...AATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATTGCTGAATCGCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp GTGCGATTCAGCAATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTGAATCACAGGAGCTGTaGCATATGCTATACTGCTGT +
Preference number: 4 (lower is better)
Translates to: VRFSNFPDAGNSWCLCPIESQEL*HMLYCC
Trigger: ACAGCAGTATAGCATATGTCACAGCTCCTGTGATTC...AATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATTGCTGAATCGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp AATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTCTCACAGTAACTAAGAAATCCTGCAGCTaGAGCACTACTGCATCCTCC +
Preference number: 4 (lower is better)
Translates to: NFPDAGNSWCLCPILTVTKKSCS*STTASS
Trigger: GGAGGATGCAGTAGTGCTTCAGCTGCAGGATTTCTT...AGTTACTGTGAGAATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542921.5
CDS-3UTR GCA 90 bp GTGCGATTCAGCAATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTACTTTTATACTGAGCTaGAGCCAATGCTGCCTTGTG +
Preference number: 4 (lower is better)
Translates to: VRFSNFPDAGNSWCLCPITFILS*SQCCLV
Trigger: CACAAGGCAGCATTGGCTGCAGCTCAGTATAAAAGT...AATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATTGCTGAATCGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR GCA 90 bp CTTTTATTAACAGGGAATGGAGGCACACTACCAACTGGGAACAAATCACCATTCCACTCTCTGGGCTGCTaGCACCATTTTTCTCAGACT +
Preference number: 4 (lower is better)
Translates to: LLLTGNGGTLPTGNKSPFHSLGC*HHFSQT
Trigger: AGTCTGAGAAAAATGGTGGCAGCAGCCCAGAGAGTG...GAATGGTGATTTGTTCCCAGTTGGTAGTGTGCCTCCATTCCCTGTTAATAAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327520.7
CDS-3UTR GCA 90 bp CTTTTATTAACAGGGAATGGAGGCACACTACCAACTGGGAACAAATCACCATTCCATCACTCTCTGGGCTaGTGCCACCATTTTTCTCAG +
Preference number: 4 (lower is better)
Translates to: LLLTGNGGTLPTGNKSPFHHSLG*CHHFSQ
Trigger: CTGAGAAAAATGGTGGCAGCAGCCCAGAGAGTGATG...GAATGGTGATTTGTTCCCAGTTGGTAGTGTGCCTCCATTCCCTGTTAATAAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327520.7
CDS-3UTR GCA 90 bp ACAGATCAGTCTTTTATTAACAGGGAATGGAGGCACACTACCAACTGGGAACAACACACCAGAAACCACTaGAGGCTGTCCTTGTTTCCA +
Preference number: 4 (lower is better)
Translates to: TDQSFINREWRHTTNWEQHTRNH*RLSLFP
Trigger: TGGAAACAAGGACAGCCTGCAGTGGTTTCTGGTGTG...TTGTTCCCAGTTGGTAGTGTGCCTCCATTCCCTGTTAATAAAAGACTGATCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327520.7
CDS-3UTR GCA 90 bp GTGCGATTCAGCAATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTGCCACTGAATCTGTTTaGTCTTTGATCCCTGAGTCT +
Preference number: 4 (lower is better)
Translates to: VRFSNFPDAGNSWCLCPIATESV*SLIPES
Trigger: AGACTCAGGGATCAAAGAGCAAACAGATTCAGTGGC...AATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATTGCTGAATCGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399262.7
CDS-3UTR GCA 90 bp GACATGACTGCTGTGCGATTCAGCAATTTCCCAGATGCAGGCAATAGCTGGTGTAGGTTTGAAAGTCAATaGAGGCCACTGAATCTGTTT +
Preference number: 4 (lower is better)
Translates to: DMTAVRFSNFPDAGNSWCRFESQ*RPLNLF
Trigger: AAACAGATTCAGTGGCCTGCATTGACTTTCAAACCT...ACACCAGCTATTGCCTGCATCTGGGAAATTGCTGAATCGCACAGCAGTCATGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399262.7
CDS-3UTR GCA 90 bp AATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTCTCACAGTAACTCTAAGTGGCTCAAGCTaGTGGCATGAGCACTCTCTA +
Preference number: 4 (lower is better)
Translates to: NFPDAGNSWCLCPILTVTLSGSS*WHEHSL
Trigger: TAGAGAGTGCTCATGCCAGCAGCTTGAGCCACTTAG...AGTTACTGTGAGAATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR GCA 90 bp GTGCGATTCAGCAATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTAACAACTGTTGTTGTTaGTGGTGTGCTAGCGCTAAG +
Preference number: 4 (lower is better)
Translates to: VRFSNFPDAGNSWCLCPINNCCC*WCASAK
Trigger: CTTAGCGCTAGCACACCAGCAACAACAACAGTTGTT...AATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATTGCTGAATCGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR GCA 90 bp CTTGGCACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATAGGCCGATGAGGCTCTaGACTGGAAGGTCTGACAGG +
Preference number: 4 (lower is better)
Translates to: LGTDGFMKLKVSVHTYHHRPMRL*TGRSDR
Trigger: CCTGTCAGACCTTCCAGTGCAGAGCCTCATCGGCCT...ATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGTGCCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR GCA 90 bp AATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTCTCACAGTAACTTTGAGGATTAGCTGCTaGCGCTGCAAGGGCATTACT +
Preference number: 4 (lower is better)
Translates to: NFPDAGNSWCLCPILTVTLRISC*RCKGIT
Trigger: AGTAATGCCCTTGCAGCGGCAGCAGCTAATCCTCAA...AGTTACTGTGAGAATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CCA 90 bp ATAACATTGAATCACAGGAGCTGTGACATATGCTATACTGCTGTGGTGTCAGTAAGGCACTGCACAACCTaGGTCCTAGATCAGGACGTA +
Preference number: 4 (lower is better)
Translates to: ITLNHRSCDICYTAVVSVRHCTT*VLDQDV
Trigger: TACGTCCTGATCTAGGACCCAGGTTGTGCAGTGCCT...TACTGACACCACAGCAGTATAGCATATGTCACAGCTCCTGTGATTCAATGTTAT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CCA 90 bp GTGCGATTCAGCAATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTGATGTAGCCAAGGACTaGGAGAATTCCTCCTTAATG +
Preference number: 4 (lower is better)
Translates to: VRFSNFPDAGNSWCLCPIDVAKD*ENSSLM
Trigger: CATTAAGGAGGAATTCTCCCAGTCCTTGGCTACATC...AATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATTGCTGAATCGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CCA 90 bp CTGGTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCCTGAGGTCACAGGGGTaGGCTGATGTAGCCAAGGAC +
Preference number: 4 (lower is better)
Translates to: LVFVSYSHSNCLNVVKNILRSQG*ADVAKD
Trigger: GTCCTTGGCTACATCAGCCCACCCCTGTGACCTCAG...GATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACACCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CCA 90 bp GACATGACTGCTGTGCGATTCAGCAATTTCCCAGATGCAGGCAATAGCTGGTGTTTTTGTACTAGAAGATaGACGCACAATGACAGATGC +
Preference number: 4 (lower is better)
Translates to: DMTAVRFSNFPDAGNSWCFCTRR*THNDRC
Trigger: GCATCTGTCATTGTGCGTCCATCTTCTAGTACAAAA...ACACCAGCTATTGCCTGCATCTGGGAAATTGCTGAATCGCACAGCAGTCATGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399262.7
ENST00000639129.1
CDS-3UTR CCA 90 bp GTGCGATTCAGCAATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTGATGCAGGCAATAGCTaGTGTTTGTGTCCTATTCTC +
Preference number: 4 (lower is better)
Translates to: VRFSNFPDAGNSWCLCPIDAGNS*CLCPIL
Trigger: GAGAATAGGACACAAACACCAGCTATTGCCTGCATC...AATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATTGCTGAATCGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp CTTTTATTAACAGGGAATGGAGGCACACTACCAACTGGGAACAAATCACCATTCAGAGGAAATTACTTCTaGACCACCCCAGCTGGAAAC +
Preference number: 4 (lower is better)
Translates to: LLLTGNGGTLPTGNKSPFRGNYF*TTPAGN
Trigger: GTTTCCAGCTGGGGTGGTTCAGAAGTAATTTCCTCT...GAATGGTGATTTGTTCCCAGTTGGTAGTGTGCCTCCATTCCCTGTTAATAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327520.7
CDS-3UTR TCA 90 bp AATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTCTCACAGTAACTAGAGGAAATTACTTCTaGACCACCCCAGCTGGAAAC +
Preference number: 4 (lower is better)
Translates to: NFPDAGNSWCLCPILTVTRGNYF*TTPAGN
Trigger: GTTTCCAGCTGGGGTGGTTCAGAAGTAATTTCCTCT...AGTTACTGTGAGAATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp ACAGATCAGTCTTTTATTAACAGGGAATGGAGGCACACTACCAACTGGGAACAAGAGCCACTGGCTGACTaGCACTTTTTGAAGATACAC +
Preference number: 4 (lower is better)
Translates to: TDQSFINREWRHTTNWEQEPLAD*HFLKIH
Trigger: GTGTATCTTCAAAAAGTGTCAGTCAGCCAGTGGCTC...TTGTTCCCAGTTGGTAGTGTGCCTCCATTCCCTGTTAATAAAAGACTGATCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327520.7
CDS-3UTR TCA 90 bp CTTTTATTAACAGGGAATGGAGGCACACTACCAACTGGGAACAAATCACCATTCAAAATCAGTTGTGCCTaGGAACCCAGAACTGGGTTG +
Preference number: 4 (lower is better)
Translates to: LLLTGNGGTLPTGNKSPFKISCA*EPRTGL
Trigger: CAACCCAGTTCTGGGTTCTCAGGCACAACTGATTTT...GAATGGTGATTTGTTCCCAGTTGGTAGTGTGCCTCCATTCCCTGTTAATAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327520.7
CDS-3UTR TCA 90 bp ATAGCTACTTTTCGCCACCCAACTAATATCTGGCTCAAGAACAGATCAGTCTTTCTTTGGCACTCCTGCTaGGAACTCCATTGGGTTTCA +
Preference number: 4 (lower is better)
Translates to: IATFRHPTNIWLKNRSVFLWHSC*ELHWVS
Trigger: TGAAACCCAATGGAGTTCTCAGCAGGAGTGCCAAAG...AAAGACTGATCTGTTCTTGAGCCAGATATTAGTTGGGTGGCGAAAAGTAGCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327520.7
CDS-3UTR TCA 90 bp TTTATTAACAGGGAATGGAGGCACACTACCAACTGGGAACAAATCACCATTCAAGGAGTATTTTGCTGCTaGGACTCAGGCATGCACAGA +
Preference number: 4 (lower is better)
Translates to: FINREWRHTTNWEQITIQGVFCC*DSGMHR
Trigger: TCTGTGCATGCCTGAGTCTCAGCAGCAAAATACTCC...TTGAATGGTGATTTGTTCCCAGTTGGTAGTGTGCCTCCATTCCCTGTTAATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327520.7
CDS-3UTR TCA 90 bp TTTATTAACAGGGAATGGAGGCACACTACCAACTGGGAACAAATCACCATTCAACTGGGACACAAGAGGTaGTGTTCTGCCATTTGGAGA +
Preference number: 4 (lower is better)
Translates to: FINREWRHTTNWEQITIQLGHKR*CSAIWR
Trigger: TCTCCAAATGGCAGAACATCACCTCTTGTGTCCCAG...TTGAATGGTGATTTGTTCCCAGTTGGTAGTGTGCCTCCATTCCCTGTTAATAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327520.7
CDS-3UTR TCA 90 bp ATAACATTGAATCACAGGAGCTGTGACATATGCTATACTGCTGTGGTGTCAGTACTGGGACACAAGAGGTaGTGTTCTGCCATTTGGAGA +
Preference number: 4 (lower is better)
Translates to: ITLNHRSCDICYTAVVSVLGHKR*CSAIWR
Trigger: TCTCCAAATGGCAGAACATCACCTCTTGTGTCCCAG...TACTGACACCACAGCAGTATAGCATATGTCACAGCTCCTGTGATTCAATGTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp GACATGACTGCTGTGCGATTCAGCAATTTCCCAGATGCAGGCAATAGCTGGTGTCATTGGCATTTGAAATaGTGCTATCTTTGCAGTTCA +
Preference number: 4 (lower is better)
Translates to: DMTAVRFSNFPDAGNSWCHWHLK*CYLCSS
Trigger: TGAACTGCAAAGATAGCATCATTTCAAATGCCAATG...ACACCAGCTATTGCCTGCATCTGGGAAATTGCTGAATCGCACAGCAGTCATGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399262.7
ENST00000639129.1
CDS-3UTR TCA 90 bp GTGCGATTCAGCAATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTGCTCTCAGAAAAGTCTaGAACATTGTCAGTTCGAAG +
Preference number: 4 (lower is better)
Translates to: VRFSNFPDAGNSWCLCPIALRKV*NIVSSK
Trigger: CTTCGAACTGACAATGTTTCAGACTTTTCTGAGAGC...AATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATTGCTGAATCGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp GACATGACTGCTGTGCGATTCAGCAATTTCCCAGATGCAGGCAATAGCTGGTGTGTACTTGAGTTTTCCTaGGCCACCTTTTCTAAATTA +
Preference number: 4 (lower is better)
Translates to: DMTAVRFSNFPDAGNSWCVLEFS*ATFSKL
Trigger: TAATTTAGAAAAGGTGGCTCAGGAAAACTCAAGTAC...ACACCAGCTATTGCCTGCATCTGGGAAATTGCTGAATCGCACAGCAGTCATGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399262.7
ENST00000639129.1
CDS-3UTR TCA 90 bp GTGCGATTCAGCAATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTCCACTAGTCAGAGGATaGGTGTTAATGGTAGGTAAT +
Preference number: 4 (lower is better)
Translates to: VRFSNFPDAGNSWCLCPIPLVRG*VLMVGN
Trigger: ATTACCTACCATTAACACTCATCCTCTGACTAGTGG...AATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATTGCTGAATCGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp ACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATTCAAGGCTCAAGCTGCTGGCATaGGCACTCTCTAGTCGTGGG +
Preference number: 4 (lower is better)
Translates to: TDGFMKLKVSVHTYHHSRLKLLA*ALSSRG
Trigger: CCCACGACTAGAGAGTGCTCATGCCAGCAGCTTGAG...CCTTGAATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp ATAACATTGAATCACAGGAGCTGTGACATATGCTATACTGCTGTGGTGTCAGTAGCTTGTCCAAGAAGATaGGGTGACTGGTGCTGTAAC +
Preference number: 4 (lower is better)
Translates to: ITLNHRSCDICYTAVVSVACPRR*GDWCCN
Trigger: GTTACAGCACCAGTCACCTCATCTTCTTGGACAAGC...TACTGACACCACAGCAGTATAGCATATGTCACAGCTCCTGTGATTCAATGTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp GTGCGATTCAGCAATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTTTCTTTGGATGGGTATaGTCTTGGTGGTTCATTGAC +
Preference number: 4 (lower is better)
Translates to: VRFSNFPDAGNSWCLCPIFFGWV*SWWFID
Trigger: GTCAATGAACCACCAAGATCATACCCATCCAAAGAA...AATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATTGCTGAATCGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp GTGCGATTCAGCAATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTGGCTTCTGTGATTCTTaGACTTTACCACCAGCATTT +
Preference number: 4 (lower is better)
Translates to: VRFSNFPDAGNSWCLCPIGFCDS*TLPPAF
Trigger: AAATGCTGGTGGTAAAGTTCAAGAATCACAGAAGCC...AATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATTGCTGAATCGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR GCA 90 bp ATAACATTGAATCACAGGAGCTGTGACATATGCTATACTGCTGTGGTGTCAGTACATCACTCTCTGGGCTaGTGCCACCATTTTTCTCAG +
Preference number: 4 (lower is better)
Translates to: ITLNHRSCDICYTAVVSVHHSLG*CHHFSQ
Trigger: CTGAGAAAAATGGTGGCAGCAGCCCAGAGAGTGATG...TACTGACACCACAGCAGTATAGCATATGTCACAGCTCCTGTGATTCAATGTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR GCA 90 bp AATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTCTCACAGTAACTAGATCTGCTAACCAGTaGAGTGGTGACTGGGATTCT +
Preference number: 4 (lower is better)
Translates to: NFPDAGNSWCLCPILTVTRSANQ*SGDWDS
Trigger: AGAATCCCAGTCACCACTGCACTGGTTAGCAGATCT...AGTTACTGTGAGAATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR GCA 90 bp GTGCGATTCAGCAATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTCAAGAGGTGATGTTCTaGCATTTGGAGATTCAGAGT +
Preference number: 4 (lower is better)
Translates to: VRFSNFPDAGNSWCLCPIQEVMF*HLEIQS
Trigger: ACTCTGAATCTCCAAATGGCAGAACATCACCTCTTG...AATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATTGCTGAATCGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR GCA 90 bp TTTATTAACAGGGAATGGAGGCACACTACCAACTGGGAACAAATCACCATTCAACTACACCATAGGCACTaGACAACCTGGGTCCTAGAT +
Preference number: 4 (lower is better)
Translates to: FINREWRHTTNWEQITIQLHHRH*TTWVLD
Trigger: ATCTAGGACCCAGGTTGTGCAGTGCCTATGGTGTAG...TTGAATGGTGATTTGTTCCCAGTTGGTAGTGTGCCTCCATTCCCTGTTAATAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327520.7
CDS-3UTR GCA 90 bp ATAACATTGAATCACAGGAGCTGTGACATATGCTATACTGCTGTGGTGTCAGTACTACACCATAGGCACTaGACAACCTGGGTCCTAGAT +
Preference number: 4 (lower is better)
Translates to: ITLNHRSCDICYTAVVSVLHHRH*TTWVLD
Trigger: ATCTAGGACCCAGGTTGTGCAGTGCCTATGGTGTAG...TACTGACACCACAGCAGTATAGCATATGTCACAGCTCCTGTGATTCAATGTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR GCA 90 bp ATAACATTGAATCACAGGAGCTGTGACATATGCTATACTGCTGTGGTGTCAGTACTAAGTGGCTCAAGCTaGTGGCATGAGCACTCTCTA +
Preference number: 4 (lower is better)
Translates to: ITLNHRSCDICYTAVVSVLSGSS*WHEHSL
Trigger: TAGAGAGTGCTCATGCCAGCAGCTTGAGCCACTTAG...TACTGACACCACAGCAGTATAGCATATGTCACAGCTCCTGTGATTCAATGTTAT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR GCA 90 bp GTGCGATTCAGCAATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTAGCTTCAGCATTAACTaGATTTTCTGGGTGAACCCA +
Preference number: 4 (lower is better)
Translates to: VRFSNFPDAGNSWCLCPISFSIN*IFWVNP
Trigger: TGGGTTCACCCAGAAAATGCAGTTAATGCTGAAGCT...AATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATTGCTGAATCGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR GCA 90 bp AATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTCTCACAGTAACTATTAGCTGCTGCCGCTaGAAGGGCATTACTCTGTTT +
Preference number: 4 (lower is better)
Translates to: NFPDAGNSWCLCPILTVTISCCR*KGITLF
Trigger: AAACAGAGTAATGCCCTTGCAGCGGCAGCAGCTAAT...AGTTACTGTGAGAATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR GCA 90 bp ATAACATTGAATCACAGGAGCTGTGACATATGCTATACTGCTGTGGTGTCAGTAAGTTTGAGGATTAGCTaGTGCCGCTGCAAGGGCATT +
Preference number: 4 (lower is better)
Translates to: ITLNHRSCDICYTAVVSVSLRIS*CRCKGI
Trigger: AATGCCCTTGCAGCGGCAGCAGCTAATCCTCAAACT...TACTGACACCACAGCAGTATAGCATATGTCACAGCTCCTGTGATTCAATGTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CCA 90 bp AATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTCTCACAGTAACTCTGAGAACCCAGAACTaGGTTGAACAACACTTCCTG +
Preference number: 4 (lower is better)
Translates to: NFPDAGNSWCLCPILTVTLRTQN*VEQHFL
Trigger: CAGGAAGTGTTGTTCAACCCAGTTCTGGGTTCTCAG...AGTTACTGTGAGAATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CCA 90 bp GTGCGATTCAGCAATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTTTCAGGAGATCAGCTTaGTGGTCTCCAAAATCAAGA +
Preference number: 4 (lower is better)
Translates to: VRFSNFPDAGNSWCLCPIFRRSA*WSPKSR
Trigger: TCTTGATTTTGGAGACCACCAAGCTGATCTCCTGAA...AATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATTGCTGAATCGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CCA 90 bp AATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTCTCACAGTAACTAGTTCATTGCTGGTCTaGGACTATTTGCTTGGGCAC +
Preference number: 4 (lower is better)
Translates to: NFPDAGNSWCLCPILTVTSSLLV*DYLLGH
Trigger: GTGCCCAAGCAAATAGTCCCAGACCAGCAATGAACT...AGTTACTGTGAGAATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CCA 90 bp GTGCGATTCAGCAATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTGCCCTTCCTCTTATTTaGACGGATACTTCTTTGTTG +
Preference number: 4 (lower is better)
Translates to: VRFSNFPDAGNSWCLCPIALPLI*TDTSLL
Trigger: CAACAAAGAAGTATCCGTCCAAATAAGAGGAAGGGC...AATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATTGCTGAATCGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CCA 90 bp ATAACATTGAATCACAGGAGCTGTGACATATGCTATACTGCTGTGGTGTCAGTAGATCCGGCTAGTAAATaGGGTGCAGGAGTTAAGGCA +
Preference number: 4 (lower is better)
Translates to: ITLNHRSCDICYTAVVSVDPASK*GAGVKA
Trigger: TGCCTTAACTCCTGCACCCCATTTACTAGCCGGATC...TACTGACACCACAGCAGTATAGCATATGTCACAGCTCCTGTGATTCAATGTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CCA 90 bp AATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTCTCACAGTAACTAACTGTTGTTGTTGCTaGTGTGCTAGCGCTAAGTGG +
Preference number: 4 (lower is better)
Translates to: NFPDAGNSWCLCPILTVTNCCCC*CASAKW
Trigger: CCACTTAGCGCTAGCACACCAGCAACAACAACAGTT...AGTTACTGTGAGAATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CCA 90 bp GTGCGATTCAGCAATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTAATGGTGGACTGGAATaGGCTGTAATTTTAAGAGGC +
Preference number: 4 (lower is better)
Translates to: VRFSNFPDAGNSWCLCPINGGLE*AVILRG
Trigger: GCCTCTTAAAATTACAGCCCATTCCAGTCCACCATT...AATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATTGCTGAATCGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CCA 90 bp GTGCGATTCAGCAATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTCTCTTAAAATTTGCCTaGGAGTCTTTTGGTTCGGGT +
Preference number: 4 (lower is better)
Translates to: VRFSNFPDAGNSWCLCPILLKFA*ESFGSG
Trigger: ACCCGAACCAAAAGACTCCCAGGCAAATTTTAAGAG...AATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATTGCTGAATCGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp AATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTCTCACAGTAACTTTTATGTGCCCCAGCTaGAGATCTTTCACTAACACG +
Preference number: 4 (lower is better)
Translates to: NFPDAGNSWCLCPILTVTFMCPS*RSFTNT
Trigger: CGTGTTAGTGAAAGATCTTCAGCTGGGGCACATAAA...AGTTACTGTGAGAATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp ACAGATCAGTCTTTTATTAACAGGGAATGGAGGCACACTACCAACTGGGAACAACGGCTTCTGCTAGTTTaGGGCAATCTGTTTTATGTG +
Preference number: 4 (lower is better)
Translates to: TDQSFINREWRHTTNWEQRLLLV*GNLFYV
Trigger: CACATAAAACAGATTGCCTCAAACTAGCAGAAGCCG...TTGTTCCCAGTTGGTAGTGTGCCTCCATTCCCTGTTAATAAAAGACTGATCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327520.7
CDS-3UTR TCA 90 bp CTGGTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCTACAGCAGACATGACTaGACTGGGAACACTGCCCTG +
Preference number: 4 (lower is better)
Translates to: LVFVSYSHSNCLNVVKNIYSRHD*TGNTAL
Trigger: CAGGGCAGTGTTCCCAGTTCAGTCATGTCTGCTGTA...GATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACACCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp CTTGGCACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATTACAGCAGACATGACTaGACTGGGAACACTGCCCTG +
Preference number: 4 (lower is better)
Translates to: LGTDGFMKLKVSVHTYHHYSRHD*TGNTAL
Trigger: CAGGGCAGTGTTCCCAGTTCAGTCATGTCTGCTGTA...ATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGTGCCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp AATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTCTCACAGTAACTTATTTACAGCAGACATaGCTGAACTGGGAACACTGC +
Preference number: 4 (lower is better)
Translates to: NFPDAGNSWCLCPILTVTYLQQT*LNWEHC
Trigger: GCAGTGTTCCCAGTTCAGTCATGTCTGCTGTAAATA...AGTTACTGTGAGAATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp ATAACATTGAATCACAGGAGCTGTGACATATGCTATACTGCTGTGGTGTCAGTAAGAGGAAATTACTTCTaGACCACCCCAGCTGGAAAC +
Preference number: 4 (lower is better)
Translates to: ITLNHRSCDICYTAVVSVRGNYF*TTPAGN
Trigger: GTTTCCAGCTGGGGTGGTTCAGAAGTAATTTCCTCT...TACTGACACCACAGCAGTATAGCATATGTCACAGCTCCTGTGATTCAATGTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp ATAACATTGAATCACAGGAGCTGTGACATATGCTATACTGCTGTGGTGTCAGTAGAGCCACTGGCTGACTaGCACTTTTTGAAGATACAC +
Preference number: 4 (lower is better)
Translates to: ITLNHRSCDICYTAVVSVEPLAD*HFLKIH
Trigger: GTGTATCTTCAAAAAGTGTCAGTCAGCCAGTGGCTC...TACTGACACCACAGCAGTATAGCATATGTCACAGCTCCTGTGATTCAATGTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp CTTTTATTAACAGGGAATGGAGGCACACTACCAACTGGGAACAAATCACCATTCAACCCAGAACTGGGTTaGACAACACTTCCTGTCTTA +
Preference number: 4 (lower is better)
Translates to: LLLTGNGGTLPTGNKSPFNPELG*TTLPVL
Trigger: TAAGACAGGAAGTGTTGTTCAACCCAGTTCTGGGTT...GAATGGTGATTTGTTCCCAGTTGGTAGTGTGCCTCCATTCCCTGTTAATAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327520.7
CDS-3UTR TCA 90 bp ACAGATCAGTCTTTTATTAACAGGGAATGGAGGCACACTACCAACTGGGAACAAATTTTTATCTTCTTCTaGGTGTCTGGTGAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: TDQSFINREWRHTTNWEQIFIFF*VSGEPG
Trigger: GCCTGGCTCACCAGACACTCAGAAGAAGATAAAAAT...TTGTTCCCAGTTGGTAGTGTGCCTCCATTCCCTGTTAATAAAAGACTGATCTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327520.7
CDS-3UTR TCA 90 bp AAGTATCATAGTATCAGATGTGATAGAGTAGAATCATTCCCTAGGTCAGCAGCCGCTTTCACTTTCATCTaGGTCTCCACTTTCAGAGCC +
Preference number: 4 (lower is better)
Translates to: KYHSIRCDRVESFPRSAAAFTFI*VSTFRA
Trigger: GGCTCTGAAAGTGGAGACTCAGATGAAAGTGAAAGC...GGCTGCTGACCTAGGGAATGATTCTACTCTATCACATCTGATACTATGATACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327520.7
CDS-3UTR TCA 90 bp GTGCGATTCAGCAATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTTTTAGTCCTTTGCTCTaGCTTGCTTTCACTTTCATC +
Preference number: 4 (lower is better)
Translates to: VRFSNFPDAGNSWCLCPIFSPLL*LAFTFI
Trigger: GATGAAAGTGAAAGCAAGTCAGAGCAAAGGACTAAA...AATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATTGCTGAATCGCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp GTGCGATTCAGCAATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTTTTTGGCAGACCCAGTaGATGTTAAACAATGTTGCT +
Preference number: 4 (lower is better)
Translates to: VRFSNFPDAGNSWCLCPIFWQTQ*MLNNVA
Trigger: AGCAACATTGTTTAACATTCACTGGGTCTGCCAAAA...AATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATTGCTGAATCGCAC
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp GTGCGATTCAGCAATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTGAGAATTCCTGCTTTTaGGAGAATGCCATTTCCTTT +
Preference number: 4 (lower is better)
Translates to: VRFSNFPDAGNSWCLCPIENSCF*ENAISF
Trigger: AAAGGAAATGGCATTCTCTCAAAAGCAGGAATTCTC...AATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATTGCTGAATCGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp AATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTCTCACAGTAACTTTTCAACCAGAGGTTTaGAAGTCAATGCAGGCCACT +
Preference number: 4 (lower is better)
Translates to: NFPDAGNSWCLCPILTVTFQPEV*KSMQAT
Trigger: AGTGGCCTGCATTGACTTTCAAACCTCTGGTTGAAA...AGTTACTGTGAGAATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399262.7
CDS-3UTR TCA 90 bp CTGGTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCACAGCGTTGACGTTTTaGTTGGCACGAGACCTGCGT +
Preference number: 4 (lower is better)
Translates to: LVFVSYSHSNCLNVVKNITALTF*LARDLR
Trigger: ACGCAGGTCTCGTGCCAATCAAAACGTCAACGCTGT...GATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACACCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp AATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTCTCACAGTAACTGGAGTTAAGGCAGGATaGTGGGTACCTGGATTTAAA +
Preference number: 4 (lower is better)
Translates to: NFPDAGNSWCLCPILTVTGVKAG*WVPGFK
Trigger: TTTAAATCCAGGTACCCATCATCCTGCCTTAACTCC...AGTTACTGTGAGAATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp AATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTCTCACAGTAACTGGTGGCCTCTGTAACTaGTTTAATACTGGATCCACA +
Preference number: 4 (lower is better)
Translates to: NFPDAGNSWCLCPILTVTGGLCN*FNTGST
Trigger: TGTGGATCCAGTATTAAATCAGTTACAGAGGCCACC...AGTTACTGTGAGAATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp GTGCGATTCAGCAATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTACATCAATACTTTCTTaGAGAATTCGACGGTGTTCC +
Preference number: 4 (lower is better)
Translates to: VRFSNFPDAGNSWCLCPITSILS*RIRRCS
Trigger: GGAACACCGTCGAATTCTTCAAGAAAGTATTGATGT...AATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATTGCTGAATCGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp AATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTCTCACAGTAACTGCATCACCAAGGAACTaGATAAGAGTACAGGTTCTG +
Preference number: 4 (lower is better)
Translates to: NFPDAGNSWCLCPILTVTASPRN*IRVQVL
Trigger: CAGAACCTGTACTCTTATTCAGTTCCTTGGTGATGC...AGTTACTGTGAGAATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR GCA 90 bp CTTTTATTAACAGGGAATGGAGGCACACTACCAACTGGGAACAAATCACCATTCTACTACAGATTACAGTaGTATCCAGAGGAAGGGAGG +
Preference number: 4 (lower is better)
Translates to: LLLTGNGGTLPTGNKSPFYYRLQ*YPEEGR
Trigger: CCTCCCTTCCTCTGGATAGCACTGTAATCTGTAGTA...GAATGGTGATTTGTTCCCAGTTGGTAGTGTGCCTCCATTCCCTGTTAATAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327520.7
CDS-3UTR GCA 90 bp CTTTTATTAACAGGGAATGGAGGCACACTACCAACTGGGAACAAATCACCATTCCTTGTCTGGGAAGCTTaGCCATTTCCTACAGAGTTT +
Preference number: 4 (lower is better)
Translates to: LLLTGNGGTLPTGNKSPFLVWEA*PFPTEF
Trigger: AAACTCTGTAGGAAATGGGCAAGCTTCCCAGACAAG...GAATGGTGATTTGTTCCCAGTTGGTAGTGTGCCTCCATTCCCTGTTAATAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327520.7
CDS-3UTR GCA 90 bp AATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTCTCACAGTAACTCTTGTCTGGGAAGCTTaGCCATTTCCTACAGAGTTT +
Preference number: 4 (lower is better)
Translates to: NFPDAGNSWCLCPILTVTLVWEA*PFPTEF
Trigger: AAACTCTGTAGGAAATGGGCAAGCTTCCCAGACAAG...AGTTACTGTGAGAATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR GCA 90 bp ATAGCTACTTTTCGCCACCCAACTAATATCTGGCTCAAGAACAGATCAGTCTTTCCGGACTCCTCTCACTaGTCTTTTCCAGGCAATTTT +
Preference number: 4 (lower is better)
Translates to: IATFRHPTNIWLKNRSVFPDSSH*SFPGNF
Trigger: AAAATTGCCTGGAAAAGAGCAGTGAGAGGAGTCCGG...AAAGACTGATCTGTTCTTGAGCCAGATATTAGTTGGGTGGCGAAAAGTAGCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327520.7
CDS-3UTR GCA 90 bp ATAACATTGAATCACAGGAGCTGTGACATATGCTATACTGCTGTGGTGTCAGTACCGGACTCCTCTCACTaGTCTTTTCCAGGCAATTTT +
Preference number: 4 (lower is better)
Translates to: ITLNHRSCDICYTAVVSVPDSSH*SFPGNF
Trigger: AAAATTGCCTGGAAAAGAGCAGTGAGAGGAGTCCGG...TACTGACACCACAGCAGTATAGCATATGTCACAGCTCCTGTGATTCAATGTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR GCA 90 bp AAGTATCATAGTATCAGATGTGATAGAGTAGAATCATTCCCTAGGTCAGCAGCCAGATCTGCTAACCAGTaGAGTGGTGACTGGGATTCT +
Preference number: 4 (lower is better)
Translates to: KYHSIRCDRVESFPRSAARSANQ*SGDWDS
Trigger: AGAATCCCAGTCACCACTGCACTGGTTAGCAGATCT...GGCTGCTGACCTAGGGAATGATTCTACTCTATCACATCTGATACTATGATACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327520.7
CDS-3UTR GCA 90 bp CTTGGCACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATAGATTCGCAGCCTTGTaGTGCAGCGCCACACAAGAA +
Preference number: 4 (lower is better)
Translates to: LGTDGFMKLKVSVHTYHHRFAAL*CSATQE
Trigger: TTCTTGTGTGGCGCTGCAGCACAAGGCTGCGAATCT...ATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGTGCCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399262.7
CDS-3UTR GCA 90 bp AATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTCTCACAGTAACTTGGTCTGGGACTATTTaGTTGGGCACGTGTATAATG +
Preference number: 4 (lower is better)
Translates to: NFPDAGNSWCLCPILTVTWSGTI*LGTCIM
Trigger: CATTATACACGTGCCCAAGCAAATAGTCCCAGACCA...AGTTACTGTGAGAATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR GCA 90 bp ATAACATTGAATCACAGGAGCTGTGACATATGCTATACTGCTGTGGTGTCAGTAAGCTTGGGAGTTCATTaGTGGTCTGGGACTATTTGC +
Preference number: 4 (lower is better)
Translates to: ITLNHRSCDICYTAVVSVSLGVH*WSGTIC
Trigger: GCAAATAGTCCCAGACCAGCAATGAACTCCCAAGCT...TACTGACACCACAGCAGTATAGCATATGTCACAGCTCCTGTGATTCAATGTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR GCA 90 bp AATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTCTCACAGTAACTCTTCATCTGGTATACTaGTATCTGAGCCCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: NFPDAGNSWCLCPILTVTLHLVY*YLSPSS
Trigger: AGAGGAAGGGCTCAGATAGCAGTATACCAGATGAAG...AGTTACTGTGAGAATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR GCA 90 bp AATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTCTCACAGTAACTGGTGGACTTCGCTTATaGAGCTTATCTTCCATGACA +
Preference number: 4 (lower is better)
Translates to: NFPDAGNSWCLCPILTVTGGLRL*SLSSMT
Trigger: TGTCATGGAAGATAAGCTGCATAAGCGAAGTCCACC...AGTTACTGTGAGAATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR GCA 90 bp AATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTCTCACAGTAACTAACAACTGTTGTTGTTaGTGGTGTGCTAGCGCTAAG +
Preference number: 4 (lower is better)
Translates to: NFPDAGNSWCLCPILTVTNNCCC*WCASAK
Trigger: CTTAGCGCTAGCACACCAGCAACAACAACAGTTGTT...AGTTACTGTGAGAATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CCA 90 bp TTTATTAACAGGGAATGGAGGCACACTACCAACTGGGAACAAATCACCATTCAACTGAGAACCCAGAACTaGGTTGAACAACACTTCCTG +
Preference number: 4 (lower is better)
Translates to: FINREWRHTTNWEQITIQLRTQN*VEQHFL
Trigger: CAGGAAGTGTTGTTCAACCCAGTTCTGGGTTCTCAG...TTGAATGGTGATTTGTTCCCAGTTGGTAGTGTGCCTCCATTCCCTGTTAATAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327520.7
CDS-3UTR CCA 90 bp ATAACATTGAATCACAGGAGCTGTGACATATGCTATACTGCTGTGGTGTCAGTACTGAGAACCCAGAACTaGGTTGAACAACACTTCCTG +
Preference number: 4 (lower is better)
Translates to: ITLNHRSCDICYTAVVSVLRTQN*VEQHFL
Trigger: CAGGAAGTGTTGTTCAACCCAGTTCTGGGTTCTCAG...TACTGACACCACAGCAGTATAGCATATGTCACAGCTCCTGTGATTCAATGTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CCA 90 bp GACATGACTGCTGTGCGATTCAGCAATTTCCCAGATGCAGGCAATAGCTGGTGTGAACCAGGTATAATTTaGGTTGGCATTAAATGTTTG +
Preference number: 4 (lower is better)
Translates to: DMTAVRFSNFPDAGNSWCEPGII*VGIKCL
Trigger: CAAACATTTAATGCCAACCCAAATTATACCTGGTTC...ACACCAGCTATTGCCTGCATCTGGGAAATTGCTGAATCGCACAGCAGTCATGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399262.7
ENST00000639129.1
CDS-3UTR CCA 90 bp GTGCGATTCAGCAATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTCCTTGTTCATTATTCTaGGACACAAGAGGTGATGTT +
Preference number: 4 (lower is better)
Translates to: VRFSNFPDAGNSWCLCPIPCSLF*DTRGDV
Trigger: AACATCACCTCTTGTGTCCCAGAATAATGAACAAGG...AATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATTGCTGAATCGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CCA 90 bp CTTGGCACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATAGGCACTGCACAACCTaGGTCCTAGATCAGGACGTA +
Preference number: 4 (lower is better)
Translates to: LGTDGFMKLKVSVHTYHHRHCTT*VLDQDV
Trigger: TACGTCCTGATCTAGGACCCAGGTTGTGCAGTGCCT...ATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGTGCCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CCA 90 bp ATAACATTGAATCACAGGAGCTGTGACATATGCTATACTGCTGTGGTGTCAGTAAGTTCATTGCTGGTCTaGGACTATTTGCTTGGGCAC +
Preference number: 4 (lower is better)
Translates to: ITLNHRSCDICYTAVVSVSSLLV*DYLLGH
Trigger: GTGCCCAAGCAAATAGTCCCAGACCAGCAATGAACT...TACTGACACCACAGCAGTATAGCATATGTCACAGCTCCTGTGATTCAATGTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CCA 90 bp AATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTCTCACAGTAACTTTGGGAGTTCATTGCTaGTCTGGGACTATTTGCTTG +
Preference number: 4 (lower is better)
Translates to: NFPDAGNSWCLCPILTVTLGVHC*SGTICL
Trigger: CAAGCAAATAGTCCCAGACCAGCAATGAACTCCCAA...AGTTACTGTGAGAATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CCA 90 bp GTGCGATTCAGCAATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTCTTTGTTGCTGTTGCTaGTGTGTATTCTGTTTTGGT +
Preference number: 4 (lower is better)
Translates to: VRFSNFPDAGNSWCLCPILCCCC*CVFCFG
Trigger: ACCAAAACAGAATACACACCAGCAACAGCAACAAAG...AATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATTGCTGAATCGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CCA 90 bp GTGCGATTCAGCAATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTATCAATAACACATTTTaGTGTGGGTGGTCTGGATAC +
Preference number: 4 (lower is better)
Translates to: VRFSNFPDAGNSWCLCPIINNTF*CGWSGY
Trigger: GTATCCAGACCACCCACACCAAAATGTGTTATTGAT...AATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATTGCTGAATCGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CCA 90 bp GTGCGATTCAGCAATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTAGATTTTATAGTCTCTaGAGGTGGACTTCGCTTATG +
Preference number: 4 (lower is better)
Translates to: VRFSNFPDAGNSWCLCPIRFYSL*RWTSLM
Trigger: CATAAGCGAAGTCCACCTCCAGAGACTATAAAATCT...AATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATTGCTGAATCGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CCA 90 bp ATAACATTGAATCACAGGAGCTGTGACATATGCTATACTGCTGTGGTGTCAGTAATGAACAGCATGGTGTaGACCACTAGTCAGAGGATG +
Preference number: 4 (lower is better)
Translates to: ITLNHRSCDICYTAVVSVMNSMV*TTSQRM
Trigger: CATCCTCTGACTAGTGGTCCACACCATGCTGTTCAT...TACTGACACCACAGCAGTATAGCATATGTCACAGCTCCTGTGATTCAATGTTAT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CCA 90 bp GTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCAGTCTCTCTAGTCGTGGGTaGCCACCAAGTAAGGAGGCA +
Preference number: 4 (lower is better)
Translates to: VFVSYSHSNCLNVVKNISLSSRG*PPSKEA
Trigger: TGCCTCCTTACTTGGTGGCCACCCACGACTAGAGAG...ACTGATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CCA 90 bp GACATGACTGCTGTGCGATTCAGCAATTTCCCAGATGCAGGCAATAGCTGGTGTTATTTGAAACTTCTTTaGATGGGTATGATCTTGGTG +
Preference number: 4 (lower is better)
Translates to: DMTAVRFSNFPDAGNSWCYLKLL*MGMILV
Trigger: CACCAAGATCATACCCATCCAAAGAAGTTTCAAATA...ACACCAGCTATTGCCTGCATCTGGGAAATTGCTGAATCGCACAGCAGTCATGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399262.7
ENST00000639129.1
CDS-3UTR CCA 90 bp GTGCGATTCAGCAATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTGAAGAAACTGTCAAATaGGTAGGACTCCTACAATCA +
Preference number: 4 (lower is better)
Translates to: VRFSNFPDAGNSWCLCPIEETVK*VGLLQS
Trigger: TGATTGTAGGAGTCCTACCCATTTGACAGTTTCTTC...AATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATTGCTGAATCGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CCA 90 bp GTGCGATTCAGCAATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTGCTTCATCATCATATTaGTCAGGAGAAGAGAAACCA +
Preference number: 4 (lower is better)
Translates to: VRFSNFPDAGNSWCLCPIASSSY*SGEEKP
Trigger: TGGTTTCTCTTCTCCTGACCAATATGATGATGAAGC...AATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATTGCTGAATCGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp AAGTATCATAGTATCAGATGTGATAGAGTAGAATCATTCCCTAGGTCAGCAGCCTTTATGTGCCCCAGCTaGAGATCTTTCACTAACACG +
Preference number: 4 (lower is better)
Translates to: KYHSIRCDRVESFPRSAAFMCPS*RSFTNT
Trigger: CGTGTTAGTGAAAGATCTTCAGCTGGGGCACATAAA...GGCTGCTGACCTAGGGAATGATTCTACTCTATCACATCTGATACTATGATACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327520.7
CDS-3UTR TCA 90 bp CTTGGCACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATGGGAACACTGCCCTGTaGGACAGCCTGAAAGTTTTT +
Preference number: 4 (lower is better)
Translates to: LGTDGFMKLKVSVHTYHHGNTAL*DSLKVF
Trigger: AAAAACTTTCAGGCTGTCTCACAGGGCAGTGTTCCC...ATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGTGCCAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp ATAGCTACTTTTCGCCACCCAACTAATATCTGGCTCAAGAACAGATCAGTCTTTTATTTACAGCAGACATaGCTGAACTGGGAACACTGC +
Preference number: 4 (lower is better)
Translates to: IATFRHPTNIWLKNRSVFYLQQT*LNWEHC
Trigger: GCAGTGTTCCCAGTTCAGTCATGTCTGCTGTAAATA...AAAGACTGATCTGTTCTTGAGCCAGATATTAGTTGGGTGGCGAAAAGTAGCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327520.7
CDS-3UTR TCA 90 bp ATAACATTGAATCACAGGAGCTGTGACATATGCTATACTGCTGTGGTGTCAGTATATTTACAGCAGACATaGCTGAACTGGGAACACTGC +
Preference number: 4 (lower is better)
Translates to: ITLNHRSCDICYTAVVSVYLQQT*LNWEHC
Trigger: GCAGTGTTCCCAGTTCAGTCATGTCTGCTGTAAATA...TACTGACACCACAGCAGTATAGCATATGTCACAGCTCCTGTGATTCAATGTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp CTTTTATTAACAGGGAATGGAGGCACACTACCAACTGGGAACAAATCACCATTCTATCGGCAGCAGATGTaGTTACATCCGTTTTGGTAT +
Preference number: 4 (lower is better)
Translates to: LLLTGNGGTLPTGNKSPFYRQQM*LHPFWY
Trigger: ATACCAAAACGGATGTAATCACATCTGCTGCCGATA...GAATGGTGATTTGTTCCCAGTTGGTAGTGTGCCTCCATTCCCTGTTAATAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327520.7
CDS-3UTR TCA 90 bp AATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTCTCACAGTAACTTATCGGCAGCAGATGTaGTTACATCCGTTTTGGTAT +
Preference number: 4 (lower is better)
Translates to: NFPDAGNSWCLCPILTVTYRQQM*LHPFWY
Trigger: ATACCAAAACGGATGTAATCACATCTGCTGCCGATA...AGTTACTGTGAGAATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp TTTATTAACAGGGAATGGAGGCACACTACCAACTGGGAACAAATCACCATTCAATTACTACTTTTATACTaGGCTGCAGCCAATGCTGCC +
Preference number: 4 (lower is better)
Translates to: FINREWRHTTNWEQITIQLLLLY*AAANAA
Trigger: GGCAGCATTGGCTGCAGCTCAGTATAAAAGTAGTAA...TTGAATGGTGATTTGTTCCCAGTTGGTAGTGTGCCTCCATTCCCTGTTAATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327520.7
CDS-3UTR TCA 90 bp CTTGGCACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATCTTCTGAGTGTCTGGTaGGCCAGGCCTTTTTCAGTT +
Preference number: 4 (lower is better)
Translates to: LGTDGFMKLKVSVHTYHHLLSVW*ARPFSV
Trigger: AACTGAAAAAGGCCTGGCTCACCAGACACTCAGAAG...ATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGTGCCAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp CTTGGCACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATCTTTGGCACTCCTGCTaGGAACTCCATTGGGTTTCA +
Preference number: 4 (lower is better)
Translates to: LGTDGFMKLKVSVHTYHHLWHSC*ELHWVS
Trigger: TGAAACCCAATGGAGTTCTCAGCAGGAGTGCCAAAG...ATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGTGCCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp CTTGGCACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATGGAGTATTTTGCTGCTaGGACTCAGGCATGCACAGA +
Preference number: 4 (lower is better)
Translates to: LGTDGFMKLKVSVHTYHHGVFCC*DSGMHR
Trigger: TCTGTGCATGCCTGAGTCTCAGCAGCAAAATACTCC...ATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGTGCCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp CTGGTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCGGAGTATTTTGCTGCTaGGACTCAGGCATGCACAGA +
Preference number: 4 (lower is better)
Translates to: LVFVSYSHSNCLNVVKNIGVFCC*DSGMHR
Trigger: TCTGTGCATGCCTGAGTCTCAGCAGCAAAATACTCC...GATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACACCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp ACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATTCAAGGACTTGGGGCTCCCATTaGATATACTGGGGCAAAGGC +
Preference number: 4 (lower is better)
Translates to: TDGFMKLKVSVHTYHHSRTWGSH*IYWGKG
Trigger: GCCTTTGCCCCAGTATATTCAATGGGAGCCCCAAGT...CCTTGAATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp CTTTTATTAACAGGGAATGGAGGCACACTACCAACTGGGAACAAATCACCATTCCTTGAAGTCTTCTCCTaGAGGCCAGTCTTTCAATTT +
Preference number: 4 (lower is better)
Translates to: LLLTGNGGTLPTGNKSPFLEVFS*RPVFQF
Trigger: AAATTGAAAGACTGGCCTTCAGGAGAAGACTTCAAG...GAATGGTGATTTGTTCCCAGTTGGTAGTGTGCCTCCATTCCCTGTTAATAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327520.7
CDS-3UTR TCA 90 bp AATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTCTCACAGTAACTCTTGAAGTCTTCTCCTaGAGGCCAGTCTTTCAATTT +
Preference number: 4 (lower is better)
Translates to: NFPDAGNSWCLCPILTVTLEVFS*RPVFQF
Trigger: AAATTGAAAGACTGGCCTTCAGGAGAAGACTTCAAG...AGTTACTGTGAGAATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp AAGTATCATAGTATCAGATGTGATAGAGTAGAATCATTCCCTAGGTCAGCAGCCAAGGTACGGCAACAATaGATAAGTCCTTGCTTGAGG +
Preference number: 4 (lower is better)
Translates to: KYHSIRCDRVESFPRSAAKVRQQ*ISPCLR
Trigger: CCTCAAGCAAGGACTTATTCATTGTTGCCGTACCTT...GGCTGCTGACCTAGGGAATGATTCTACTCTATCACATCTGATACTATGATACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327520.7
CDS-3UTR TCA 90 bp CTTTTATTAACAGGGAATGGAGGCACACTACCAACTGGGAACAAATCACCATTCTTGTTGAATGCCAAGTaGAGGTACGGCAACAATGAA +
Preference number: 4 (lower is better)
Translates to: LLLTGNGGTLPTGNKSPFLLNAK*RYGNNE
Trigger: TTCATTGTTGCCGTACCTTCACTTGGCATTCAACAA...GAATGGTGATTTGTTCCCAGTTGGTAGTGTGCCTCCATTCCCTGTTAATAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327520.7
CDS-3UTR TCA 90 bp ACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATTCAAGGACTTTCACTTCCTCATaGAGCTGCGGGTTGTCCCTG +
Preference number: 4 (lower is better)
Translates to: TDGFMKLKVSVHTYHHSRTFTSS*SCGLSL
Trigger: CAGGGACAACCCGCAGCTTCATGAGGAAGTGAAAGT...CCTTGAATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399262.7
ENST00000542921.5
CDS-3UTR TCA 90 bp GTGCGATTCAGCAATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTTGCATAAAAATCTCCTaGACCTTTTGTTCCTTTACC +
Preference number: 4 (lower is better)
Translates to: VRFSNFPDAGNSWCLCPICIKIS*TFCSFT
Trigger: GGTAAAGGAACAAAAGGTTCAGGAGATTTTTATGCA...AATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATTGCTGAATCGCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399262.7
ENST00000542921.5
CDS-3UTR TCA 90 bp ACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATTCAAGGACAGCGTTGACGTTTTaGTTGGCACGAGACCTGCGT +
Preference number: 4 (lower is better)
Translates to: TDGFMKLKVSVHTYHHSRTALTF*LARDLR
Trigger: ACGCAGGTCTCGTGCCAATCAAAACGTCAACGCTGT...CCTTGAATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp ACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATTCAAGGGGCTGTGAACAGCGTTaGCGTTTTGATTGGCACGAG +
Preference number: 4 (lower is better)
Translates to: TDGFMKLKVSVHTYHHSRGCEQR*RFDWHE
Trigger: CTCGTGCCAATCAAAACGTCAACGCTGTTCACAGCC...CCTTGAATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp GTGCGATTCAGCAATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTAACTGTGGACTGTTCTaGCGAATGAATAATCATATC +
Preference number: 4 (lower is better)
Translates to: VRFSNFPDAGNSWCLCPINCGLF*RMNNHI
Trigger: GATATGATTATTCATTCGTCAGAACAGTCCACAGTT...AATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATTGCTGAATCGCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp GTGCGATTCAGCAATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTTTTAACAACTTCAGGTaGTGGGCTGGATTTTATCTT +
Preference number: 4 (lower is better)
Translates to: VRFSNFPDAGNSWCLCPIFNNFR*WAGFYL
Trigger: AAGATAAAATCCAGCCCATCACCTGAAGTTGTTAAA...AATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATTGCTGAATCGCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp AATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTCTCACAGTAACTCGAGTAGGAATTGGATaGAAACTGCATCTTGATAGC +
Preference number: 4 (lower is better)
Translates to: NFPDAGNSWCLCPILTVTRVGIG*KLHLDS
Trigger: GCTATCAAGATGCAGTTTTCATCCAATTCCTACTCG...AGTTACTGTGAGAATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp ATAACATTGAATCACAGGAGCTGTGACATATGCTATACTGCTGTGGTGTCAGTAATTAGCTCCTGTTTCTaGCCCAATAAGTGCAGGATC +
Preference number: 4 (lower is better)
Translates to: ITLNHRSCDICYTAVVSVISSCF*PNKCRI
Trigger: GATCCTGCACTTATTGGGTCAGAAACAGGAGCTAAT...TACTGACACCACAGCAGTATAGCATATGTCACAGCTCCTGTGATTCAATGTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp ATAACATTGAATCACAGGAGCTGTGACATATGCTATACTGCTGTGGTGTCAGTAAGGCAAACCAAGTCCTaGGTATGCATGTGTTCCATT +
Preference number: 4 (lower is better)
Translates to: ITLNHRSCDICYTAVVSVRQTKS*VCMCSI
Trigger: AATGGAACACATGCATACTCAGGACTTGGTTTGCCT...TACTGACACCACAGCAGTATAGCATATGTCACAGCTCCTGTGATTCAATGTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp AATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTCTCACAGTAACTGGTCTGACAGGAATGTaGCTAAGTAATCCAATACCA +
Preference number: 4 (lower is better)
Translates to: NFPDAGNSWCLCPILTVTGLTGM*LSNPIP
Trigger: TGGTATTGGATTACTTAGTCACATTCCTGTCAGACC...AGTTACTGTGAGAATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp CTTGGCACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATATTTTAAGAGGCCGATaGGGCTCTGCACTGGAAGGT +
Preference number: 4 (lower is better)
Translates to: LGTDGFMKLKVSVHTYHHILRGR*GSALEG
Trigger: ACCTTCCAGTGCAGAGCCTCATCGGCCTCTTAAAAT...ATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGTGCCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp ATAACATTGAATCACAGGAGCTGTGACATATGCTATACTGCTGTGGTGTCAGTAGGTGGCCTCTGTAACTaGTTTAATACTGGATCCACA +
Preference number: 4 (lower is better)
Translates to: ITLNHRSCDICYTAVVSVGGLCN*FNTGST
Trigger: TGTGGATCCAGTATTAAATCAGTTACAGAGGCCACC...TACTGACACCACAGCAGTATAGCATATGTCACAGCTCCTGTGATTCAATGTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp AATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTCTCACAGTAACTGGCTTCTGTGATTCTTaGACTTTACCACCAGCATTT +
Preference number: 4 (lower is better)
Translates to: NFPDAGNSWCLCPILTVTGFCDS*TLPPAF
Trigger: AAATGCTGGTGGTAAAGTTCAAGAATCACAGAAGCC...AGTTACTGTGAGAATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp ATAACATTGAATCACAGGAGCTGTGACATATGCTATACTGCTGTGGTGTCAGTAAGTTGGAGGCTTCTGTaGTTCTTGAACTTTACCACC +
Preference number: 4 (lower is better)
Translates to: ITLNHRSCDICYTAVVSVSWRLL*FLNFTT
Trigger: GGTGGTAAAGTTCAAGAATCACAGAAGCCTCCAACT...TACTGACACCACAGCAGTATAGCATATGTCACAGCTCCTGTGATTCAATGTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp ATAACATTGAATCACAGGAGCTGTGACATATGCTATACTGCTGTGGTGTCAGTATCTTCAAGCAGCCTTTaGCGGAGCTTTTTGTTCACA +
Preference number: 4 (lower is better)
Translates to: ITLNHRSCDICYTAVVSVSSSSL*RSFLFT
Trigger: TGTGAACAAAAAGCTCCGTCAAAGGCTGCTTGAAGA...TACTGACACCACAGCAGTATAGCATATGTCACAGCTCCTGTGATTCAATGTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp AATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTCTCACAGTAACTGCACTGATGGTTTTATaGAGCTTAAAGTCAGTGTGC +
Preference number: 4 (lower is better)
Translates to: NFPDAGNSWCLCPILTVTALMVL*SLKSVC
Trigger: GCACACTGACTTTAAGCTTCATAAAACCATCAGTGC...AGTTACTGTGAGAATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR GCA 90 bp GTGCGATTCAGCAATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTTCTTTAGAAGCTAACTaGATTGCTGGCATACTATCA +
Preference number: 4 (lower is better)
Translates to: VRFSNFPDAGNSWCLCPISLEAN*IAGILS
Trigger: TGATAGTATGCCAGCAATGCAGTTAGCTTCTAAAGA...AATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATTGCTGAATCGCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR GCA 90 bp TTTATTAACAGGGAATGGAGGCACACTACCAACTGGGAACAAATCACCATTCAAACTTTTATACTGAGCTaGAGCCAATGCTGCCTTGTG +
Preference number: 4 (lower is better)
Translates to: FINREWRHTTNWEQITIQTFILS*SQCCLV
Trigger: CACAAGGCAGCATTGGCTGCAGCTCAGTATAAAAGT...TTGAATGGTGATTTGTTCCCAGTTGGTAGTGTGCCTCCATTCCCTGTTAATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327520.7
CDS-3UTR GCA 90 bp ATAACATTGAATCACAGGAGCTGTGACATATGCTATACTGCTGTGGTGTCAGTACTTGTCTGGGAAGCTTaGCCATTTCCTACAGAGTTT +
Preference number: 4 (lower is better)
Translates to: ITLNHRSCDICYTAVVSVLVWEA*PFPTEF
Trigger: AAACTCTGTAGGAAATGGGCAAGCTTCCCAGACAAG...TACTGACACCACAGCAGTATAGCATATGTCACAGCTCCTGTGATTCAATGTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR GCA 90 bp CTTGGCACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATCACTCTCTGGGCTGCTaGCACCATTTTTCTCAGACT +
Preference number: 4 (lower is better)
Translates to: LGTDGFMKLKVSVHTYHHHSLGC*HHFSQT
Trigger: AGTCTGAGAAAAATGGTGGCAGCAGCCCAGAGAGTG...ATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGTGCCAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR GCA 90 bp CTGGTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCCATCACTCTCTGGGCTaGTGCCACCATTTTTCTCAG +
Preference number: 4 (lower is better)
Translates to: LVFVSYSHSNCLNVVKNIHHSLG*CHHFSQ
Trigger: CTGAGAAAAATGGTGGCAGCAGCCCAGAGAGTGATG...GATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACACCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR GCA 90 bp ATAGCTACTTTTCGCCACCCAACTAATATCTGGCTCAAGAACAGATCAGTCTTTTCCTCTCTGGCTTTTTaGTCTGCAAGATCTGCTAAC +
Preference number: 4 (lower is better)
Translates to: IATFRHPTNIWLKNRSVFSSLAF*SARSAN
Trigger: GTTAGCAGATCTTGCAGAGCAAAAAGCCAGAGAGGA...AAAGACTGATCTGTTCTTGAGCCAGATATTAGTTGGGTGGCGAAAAGTAGCTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327520.7
CDS-3UTR GCA 90 bp CTGGTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCCTACACCATAGGCACTaGACAACCTGGGTCCTAGAT +
Preference number: 4 (lower is better)
Translates to: LVFVSYSHSNCLNVVKNILHHRH*TTWVLD
Trigger: ATCTAGGACCCAGGTTGTGCAGTGCCTATGGTGTAG...GATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACACCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR GCA 90 bp ATAACATTGAATCACAGGAGCTGTGACATATGCTATACTGCTGTGGTGTCAGTAAACAACTGTTGTTGTTaGTGGTGTGCTAGCGCTAAG +
Preference number: 4 (lower is better)
Translates to: ITLNHRSCDICYTAVVSVNNCCC*WCASAK
Trigger: CTTAGCGCTAGCACACCAGCAACAACAACAGTTGTT...TACTGACACCACAGCAGTATAGCATATGTCACAGCTCCTGTGATTCAATGTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR GCA 90 bp CTGGTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCAGTTTGAGGATTAGCTaGTGCCGCTGCAAGGGCATT +
Preference number: 4 (lower is better)
Translates to: LVFVSYSHSNCLNVVKNISLRIS*CRCKGI
Trigger: AATGCCCTTGCAGCGGCAGCAGCTAATCCTCAAACT...GATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACACCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR GCA 90 bp GTGCGATTCAGCAATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTTGCCAGTATTACTGTTaGTTTGCAACTTCAGTTTAC +
Preference number: 4 (lower is better)
Translates to: VRFSNFPDAGNSWCLCPICQYYC*FATSVY
Trigger: GTAAACTGAAGTTGCAAAGCAACAGTAATACTGGCA...AATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATTGCTGAATCGCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CCA 90 bp ACAGATCAGTCTTTTATTAACAGGGAATGGAGGCACACTACCAACTGGGAACAAAGGCACACTACCAACTaGGAACAAATCACCATTCAA +
Preference number: 4 (lower is better)
Translates to: TDQSFINREWRHTTNWEQRHTTN*EQITIQ
Trigger: TTGAATGGTGATTTGTTCCCAGTTGGTAGTGTGCCT...TTGTTCCCAGTTGGTAGTGTGCCTCCATTCCCTGTTAATAAAAGACTGATCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327520.7
CDS-3UTR CCA 90 bp AATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTCTCACAGTAACTGCCCTTCCTCTTATTTaGACGGATACTTCTTTGTTG +
Preference number: 4 (lower is better)
Translates to: NFPDAGNSWCLCPILTVTALPLI*TDTSLL
Trigger: CAACAAAGAAGTATCCGTCCAAATAAGAGGAAGGGC...AGTTACTGTGAGAATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CCA 90 bp AATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTCTCACAGTAACTACATTTTGGTGTGGGTaGTCTGGATACAAACTTCTC +
Preference number: 4 (lower is better)
Translates to: NFPDAGNSWCLCPILTVTTFWCG*SGYKLL
Trigger: GAGAAGTTTGTATCCAGACCACCCACACCAAAATGT...AGTTACTGTGAGAATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CCA 90 bp ATAACATTGAATCACAGGAGCTGTGACATATGCTATACTGCTGTGGTGTCAGTACTCCAGGTAACACAGTaGGAAGTAAATGAGGGTGAT +
Preference number: 4 (lower is better)
Translates to: ITLNHRSCDICYTAVVSVLQVTQ*EVNEGD
Trigger: ATCACCCTCATTTACTTCCCACTGTGTTACCTGGAG...TACTGACACCACAGCAGTATAGCATATGTCACAGCTCCTGTGATTCAATGTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CCA 90 bp GTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCAGTAGTGGCTCAAGCTGCTaGCATGAGCACTCTCTAGTC +
Preference number: 4 (lower is better)
Translates to: VFVSYSHSNCLNVVKNISSGSSC*HEHSLV
Trigger: GACTAGAGAGTGCTCATGCCAGCAGCTTGAGCCACT...ACTGATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CCA 90 bp ATAACATTGAATCACAGGAGCTGTGACATATGCTATACTGCTGTGGTGTCAGTAGATGTAGCCAAGGACTaGGAGAATTCCTCCTTAATG +
Preference number: 4 (lower is better)
Translates to: ITLNHRSCDICYTAVVSVDVAKD*ENSSLM
Trigger: CATTAAGGAGGAATTCTCCCAGTCCTTGGCTACATC...TACTGACACCACAGCAGTATAGCATATGTCACAGCTCCTGTGATTCAATGTTAT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CCA 90 bp AATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTCTCACAGTAACTAATGGTGGACTGGAATaGGCTGTAATTTTAAGAGGC +
Preference number: 4 (lower is better)
Translates to: NFPDAGNSWCLCPILTVTNGGLE*AVILRG
Trigger: GCCTCTTAAAATTACAGCCCATTCCAGTCCACCATT...AGTTACTGTGAGAATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CCA 90 bp CTTGGCACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATCAGGCTGTGATGGATTaGTGGGTGAAATACTGGTGC +
Preference number: 4 (lower is better)
Translates to: LGTDGFMKLKVSVHTYHHQAVMD*WVKYWC
Trigger: GCACCAGTATTTCACCCACCAATCCATCACAGCCTG...ATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGTGCCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CCA 90 bp CTGGTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCCAGGCTGTGATGGATTaGTGGGTGAAATACTGGTGC +
Preference number: 4 (lower is better)
Translates to: LVFVSYSHSNCLNVVKNIQAVMD*WVKYWC
Trigger: GCACCAGTATTTCACCCACCAATCCATCACAGCCTG...GATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACACCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CCA 90 bp GTGCGATTCAGCAATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTTTCACATACCAACTTTaGTCACGTATTGGATCATGT +
Preference number: 4 (lower is better)
Translates to: VRFSNFPDAGNSWCLCPIFTYQL*SRIGSC
Trigger: ACATGATCCAATACGTGACCAAAGTTGGTATGTGAA...AATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATTGCTGAATCGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CCA 90 bp CTGGTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCATTTTCTGTCTGCTCTaGCTCAGCCCTGGCAGTGAT +
Preference number: 4 (lower is better)
Translates to: LVFVSYSHSNCLNVVKNIIFCLL*LSPGSD
Trigger: ATCACTGCCAGGGCTGAGCCAGAGCAGACAGAAAAT...GATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACACCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542921.5
CDS-3UTR TCA 90 bp ATAGCTACTTTTCGCCACCCAACTAATATCTGGCTCAAGAACAGATCAGTCTTTTCACATTTGGCAAAATaGTTCTTCCAGTTTCTCCGG +
Preference number: 4 (lower is better)
Translates to: IATFRHPTNIWLKNRSVFSHLAK*FFQFLR
Trigger: CCGGAGAAACTGGAAGAATCATTTTGCCAAATGTGA...AAAGACTGATCTGTTCTTGAGCCAGATATTAGTTGGGTGGCGAAAAGTAGCTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327520.7
CDS-3UTR TCA 90 bp ACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATTCAAGGGGGAACACTGCCCTGTaGGACAGCCTGAAAGTTTTT +
Preference number: 4 (lower is better)
Translates to: TDGFMKLKVSVHTYHHSRGNTAL*DSLKVF
Trigger: AAAAACTTTCAGGCTGTCTCACAGGGCAGTGTTCCC...CCTTGAATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp GTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCAGTGGGAACACTGCCCTGTaGGACAGCCTGAAAGTTTTT +
Preference number: 4 (lower is better)
Translates to: VFVSYSHSNCLNVVKNISGNTAL*DSLKVF
Trigger: AAAAACTTTCAGGCTGTCTCACAGGGCAGTGTTCCC...ACTGATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp ATAACATTGAATCACAGGAGCTGTGACATATGCTATACTGCTGTGGTGTCAGTATATCGGCAGCAGATGTaGTTACATCCGTTTTGGTAT +
Preference number: 4 (lower is better)
Translates to: ITLNHRSCDICYTAVVSVYRQQM*LHPFWY
Trigger: ATACCAAAACGGATGTAATCACATCTGCTGCCGATA...TACTGACACCACAGCAGTATAGCATATGTCACAGCTCCTGTGATTCAATGTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp CTTGGCACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATAGAGGAAATTACTTCTaGACCACCCCAGCTGGAAAC +
Preference number: 4 (lower is better)
Translates to: LGTDGFMKLKVSVHTYHHRGNYF*TTPAGN
Trigger: GTTTCCAGCTGGGGTGGTTCAGAAGTAATTTCCTCT...ATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGTGCCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp CTGGTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCAAAATCAGTTGTGCCTaGGAACCCAGAACTGGGTTG +
Preference number: 4 (lower is better)
Translates to: LVFVSYSHSNCLNVVKNIKISCA*EPRTGL
Trigger: CAACCCAGTTCTGGGTTCTCAGGCACAACTGATTTT...GATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACACCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp ACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATTCAAGGCTTCTGAGTGTCTGGTaGGCCAGGCCTTTTTCAGTT +
Preference number: 4 (lower is better)
Translates to: TDGFMKLKVSVHTYHHSRLLSVW*ARPFSV
Trigger: AACTGAAAAAGGCCTGGCTCACCAGACACTCAGAAG...CCTTGAATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp CTGGTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCGCTTTCACTTTCATCTaGGTCTCCACTTTCAGAGCC +
Preference number: 4 (lower is better)
Translates to: LVFVSYSHSNCLNVVKNIAFTFI*VSTFRA
Trigger: GGCTCTGAAAGTGGAGACTCAGATGAAAGTGAAAGC...GATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACACCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp GTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCAGTCTTTGGCACTCCTGCTaGGAACTCCATTGGGTTTCA +
Preference number: 4 (lower is better)
Translates to: VFVSYSHSNCLNVVKNISLWHSC*ELHWVS
Trigger: TGAAACCCAATGGAGTTCTCAGCAGGAGTGCCAAAG...ACTGATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp ACAGATCAGTCTTTTATTAACAGGGAATGGAGGCACACTACCAACTGGGAACAATTTTGGCAGACCCAGTaGATGTTAAACAATGTTGCT +
Preference number: 4 (lower is better)
Translates to: TDQSFINREWRHTTNWEQFWQTQ*MLNNVA
Trigger: AGCAACATTGTTTAACATTCACTGGGTCTGCCAAAA...TTGTTCCCAGTTGGTAGTGTGCCTCCATTCCCTGTTAATAAAAGACTGATCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327520.7
CDS-3UTR TCA 90 bp GTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCAGTCTGGGACACAAGAGGTaGTGTTCTGCCATTTGGAGA +
Preference number: 4 (lower is better)
Translates to: VFVSYSHSNCLNVVKNISLGHKR*CSAIWR
Trigger: TCTCCAAATGGCAGAACATCACCTCTTGTGTCCCAG...ACTGATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp ATAACATTGAATCACAGGAGCTGTGACATATGCTATACTGCTGTGGTGTCAGTACTTGAAGTCTTCTCCTaGAGGCCAGTCTTTCAATTT +
Preference number: 4 (lower is better)
Translates to: ITLNHRSCDICYTAVVSVLEVFS*RPVFQF
Trigger: AAATTGAAAGACTGGCCTTCAGGAGAAGACTTCAAG...TACTGACACCACAGCAGTATAGCATATGTCACAGCTCCTGTGATTCAATGTTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp ACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATTCAAGGTTGCTCTTTGATCCCTaGGTCTGGCTAGGGTCATTC +
Preference number: 4 (lower is better)
Translates to: TDGFMKLKVSVHTYHHSRLLFDP*VWLGSF
Trigger: GAATGACCCTAGCCAGACTCAGGGATCAAAGAGCAA...CCTTGAATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399262.7
CDS-3UTR TCA 90 bp AATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTCTCACAGTAACTTTCTACTGCAGTGACTaGACTGGGTATATTTCTTTC +
Preference number: 4 (lower is better)
Translates to: NFPDAGNSWCLCPILTVTFYCSD*TGYISF
Trigger: GAAAGAAATATACCCAGTTCAGTCACTGCAGTAGAA...AGTTACTGTGAGAATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399262.7
ENST00000542921.5
CDS-3UTR TCA 90 bp AATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTCTCACAGTAACTTGTGGTTCTAGTACCTaGTCATTCATAACGATCATG +
Preference number: 4 (lower is better)
Translates to: NFPDAGNSWCLCPILTVTCGSST*SFITIM
Trigger: CATGATCGTTATGAATGATCAGGTACTAGAACCACA...AGTTACTGTGAGAATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp AATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTCTCACAGTAACTTCTAGAAAGGTCATTTaGACCATAGAAGGATCGACA +
Preference number: 4 (lower is better)
Translates to: NFPDAGNSWCLCPILTVTSRKVI*TIEGST
Trigger: TGTCGATCCTTCTATGGTTCAAATGACCTTTCTAGA...AGTTACTGTGAGAATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp ATAACATTGAATCACAGGAGCTGTGACATATGCTATACTGCTGTGGTGTCAGTAGGTCTGACAGGAATGTaGCTAAGTAATCCAATACCA +
Preference number: 4 (lower is better)
Translates to: ITLNHRSCDICYTAVVSVGLTGM*LSNPIP
Trigger: TGGTATTGGATTACTTAGTCACATTCCTGTCAGACC...TACTGACACCACAGCAGTATAGCATATGTCACAGCTCCTGTGATTCAATGTTAT
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp GTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCAGTCAGGTCATTTTTGGCTaGTGTGGATGCAACAGACCG +
Preference number: 4 (lower is better)
Translates to: VFVSYSHSNCLNVVKNISQVIFG*CGCNRP
Trigger: CGGTCTGTTGCATCCACATCAGCCAAAAATGACCTG...ACTGATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp CTTGGCACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATCTTTGGGGTAAACTCTaGGGCACTGAGTGCTTCATT +
Preference number: 4 (lower is better)
Translates to: LGTDGFMKLKVSVHTYHHLWGKL*GTECFI
Trigger: AATGAAGCACTCAGTGCCTCAGAGTTTACCCCAAAG...ATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGTGCCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp CTTGGCACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATAATGAAGTCAGAGTTTaGGGATTAGCTGCTGCCGCT +
Preference number: 4 (lower is better)
Translates to: LGTDGFMKLKVSVHTYHHNEVRV*GLAAAA
Trigger: AGCGGCAGCAGCTAATCCTCAAACTCTGACTTCATT...ATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGTGCCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp CTGGTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCAATGAAGTCAGAGTTTaGGGATTAGCTGCTGCCGCT +
Preference number: 4 (lower is better)
Translates to: LVFVSYSHSNCLNVVKNINEVRV*GLAAAA
Trigger: AGCGGCAGCAGCTAATCCTCAAACTCTGACTTCATT...GATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACACCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp AATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTCTCACAGTAACTTTTGCTTCAGCTTCTTaGCTTTACGCCAATCTTTCA +
Preference number: 4 (lower is better)
Translates to: NFPDAGNSWCLCPILTVTFASAS*LYANLS
Trigger: TGAAAGATTGGCGTAAAGTCAAGAAGCTGAAGCAAA...AGTTACTGTGAGAATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR GCA 90 bp CTTTTATTAACAGGGAATGGAGGCACACTACCAACTGGGAACAAATCACCATTCTTTTCCCTAAGAGTGTaGATGGCATCTAGAAGATCT +
Preference number: 4 (lower is better)
Translates to: LLLTGNGGTLPTGNKSPFFSLRV*MASRRS
Trigger: AGATCTTCTAGATGCCATGCACACTCTTAGGGAAAA...GAATGGTGATTTGTTCCCAGTTGGTAGTGTGCCTCCATTCCCTGTTAATAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327520.7
CDS-3UTR GCA 90 bp ACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATTCAAGGCACTCTCTGGGCTGCTaGCACCATTTTTCTCAGACT +
Preference number: 4 (lower is better)
Translates to: TDGFMKLKVSVHTYHHSRHSLGC*HHFSQT
Trigger: AGTCTGAGAAAAATGGTGGCAGCAGCCCAGAGAGTG...CCTTGAATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR GCA 90 bp GTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCAGTCATCACTCTCTGGGCTaGTGCCACCATTTTTCTCAG +
Preference number: 4 (lower is better)
Translates to: VFVSYSHSNCLNVVKNISHHSLG*CHHFSQ
Trigger: CTGAGAAAAATGGTGGCAGCAGCCCAGAGAGTGATG...ACTGATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR GCA 90 bp ATAGCTACTTTTCGCCACCCAACTAATATCTGGCTCAAGAACAGATCAGTCTTTTTAACTTGTTATCTGTaGCTACATCACTCTCTGGGC +
Preference number: 4 (lower is better)
Translates to: IATFRHPTNIWLKNRSVFLTCYL*LHHSLG
Trigger: GCCCAGAGAGTGATGTAGGCACAGATAACAAGTTAA...AAAGACTGATCTGTTCTTGAGCCAGATATTAGTTGGGTGGCGAAAAGTAGCTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327520.7
CDS-3UTR GCA 90 bp CTTGGCACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATAGATCTGCTAACCAGTaGAGTGGTGACTGGGATTCT +
Preference number: 4 (lower is better)
Translates to: LGTDGFMKLKVSVHTYHHRSANQ*SGDWDS
Trigger: AGAATCCCAGTCACCACTGCACTGGTTAGCAGATCT...ATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGTGCCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR GCA 90 bp AAGTATCATAGTATCAGATGTGATAGAGTAGAATCATTCCCTAGGTCAGCAGCCCAAGAGGTGATGTTCTaGCATTTGGAGATTCAGAGT +
Preference number: 4 (lower is better)
Translates to: KYHSIRCDRVESFPRSAAQEVMF*HLEIQS
Trigger: ACTCTGAATCTCCAAATGGCAGAACATCACCTCTTG...GGCTGCTGACCTAGGGAATGATTCTACTCTATCACATCTGATACTATGATACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327520.7
CDS-3UTR GCA 90 bp ATAACATTGAATCACAGGAGCTGTGACATATGCTATACTGCTGTGGTGTCAGTACAAGAGGTGATGTTCTaGCATTTGGAGATTCAGAGT +
Preference number: 4 (lower is better)
Translates to: ITLNHRSCDICYTAVVSVQEVMF*HLEIQS
Trigger: ACTCTGAATCTCCAAATGGCAGAACATCACCTCTTG...TACTGACACCACAGCAGTATAGCATATGTCACAGCTCCTGTGATTCAATGTTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR GCA 90 bp GTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCAGTCACACCAGAAACCACTaGAGGCTGTCCTTGTTTCCA +
Preference number: 4 (lower is better)
Translates to: VFVSYSHSNCLNVVKNISHTRNH*RLSLFP
Trigger: TGGAAACAAGGACAGCCTGCAGTGGTTTCTGGTGTG...ACTGATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR GCA 90 bp ACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATTCAAGGCACACCAGAAACCACTaGAGGCTGTCCTTGTTTCCA +
Preference number: 4 (lower is better)
Translates to: TDGFMKLKVSVHTYHHSRHTRNH*RLSLFP
Trigger: TGGAAACAAGGACAGCCTGCAGTGGTTTCTGGTGTG...CCTTGAATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR GCA 90 bp GTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCAGTCTACACCATAGGCACTaGACAACCTGGGTCCTAGAT +
Preference number: 4 (lower is better)
Translates to: VFVSYSHSNCLNVVKNISLHHRH*TTWVLD
Trigger: ATCTAGGACCCAGGTTGTGCAGTGCCTATGGTGTAG...ACTGATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR GCA 90 bp ATAACATTGAATCACAGGAGCTGTGACATATGCTATACTGCTGTGGTGTCAGTACGGATACTTCTTTGTTaGTGTTGCTGGTGTGTATTC +
Preference number: 4 (lower is better)
Translates to: ITLNHRSCDICYTAVVSVRILLC*CCWCVF
Trigger: GAATACACACCAGCAACAGCAACAAAGAAGTATCCG...TACTGACACCACAGCAGTATAGCATATGTCACAGCTCCTGTGATTCAATGTTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR GCA 90 bp GTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCAGTCTAAGTGGCTCAAGCTaGTGGCATGAGCACTCTCTA +
Preference number: 4 (lower is better)
Translates to: VFVSYSHSNCLNVVKNISLSGSS*WHEHSL
Trigger: TAGAGAGTGCTCATGCCAGCAGCTTGAGCCACTTAG...ACTGATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR GCA 90 bp CTTGGCACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATATTAGCTGCTGCCGCTaGAAGGGCATTACTCTGTTT +
Preference number: 4 (lower is better)
Translates to: LGTDGFMKLKVSVHTYHHISCCR*KGITLF
Trigger: AAACAGAGTAATGCCCTTGCAGCGGCAGCAGCTAAT...ATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGTGCCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR GCA 90 bp GTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCAGTTTGAGGATTAGCTGCTaGCGCTGCAAGGGCATTACT +
Preference number: 4 (lower is better)
Translates to: VFVSYSHSNCLNVVKNISLRISC*RCKGIT
Trigger: AGTAATGCCCTTGCAGCGGCAGCAGCTAATCCTCAA...ACTGATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR GCA 90 bp ACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATTCAAGGTTGAGGATTAGCTGCTaGCGCTGCAAGGGCATTACT +
Preference number: 4 (lower is better)
Translates to: TDGFMKLKVSVHTYHHSRLRISC*RCKGIT
Trigger: AGTAATGCCCTTGCAGCGGCAGCAGCTAATCCTCAA...CCTTGAATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR GCA 90 bp GTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCAGTAGTTTGAGGATTAGCTaGTGCCGCTGCAAGGGCATT +
Preference number: 4 (lower is better)
Translates to: VFVSYSHSNCLNVVKNISSLRIS*CRCKGI
Trigger: AATGCCCTTGCAGCGGCAGCAGCTAATCCTCAAACT...ACTGATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR GCA 90 bp ATAACATTGAATCACAGGAGCTGTGACATATGCTATACTGCTGTGGTGTCAGTAAAAGACTACTATAGCTaGCTTCCTTTCTTTCCAGGC +
Preference number: 4 (lower is better)
Translates to: ITLNHRSCDICYTAVVSVKDYYS*LPFFPG
Trigger: GCCTGGAAAGAAAGGAAGGCAGCTATAGTAGTCTTT...TACTGACACCACAGCAGTATAGCATATGTCACAGCTCCTGTGATTCAATGTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR GCA 90 bp CTTGGCACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATCTGAACCTGATGAAGTaGTCCCGCTGGCAAAACAAT +
Preference number: 4 (lower is better)
Translates to: LGTDGFMKLKVSVHTYHHLNLMK*SRWQNN
Trigger: ATTGTTTTGCCAGCGGGAGCACTTCATCAGGTTCAG...ATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGTGCCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CCA 90 bp CTGGTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCCTGAGAACCCAGAACTaGGTTGAACAACACTTCCTG +
Preference number: 4 (lower is better)
Translates to: LVFVSYSHSNCLNVVKNILRTQN*VEQHFL
Trigger: CAGGAAGTGTTGTTCAACCCAGTTCTGGGTTCTCAG...GATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACACCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CCA 90 bp GTGCGATTCAGCAATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTGAACCAGGTATAATTTaGGTTGGCATTAAATGTTTG +
Preference number: 4 (lower is better)
Translates to: VRFSNFPDAGNSWCLCPIEPGII*VGIKCL
Trigger: CAAACATTTAATGCCAACCCAAATTATACCTGGTTC...AATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATTGCTGAATCGCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CCA 90 bp AATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTCTCACAGTAACTCCTTGTTCATTATTCTaGGACACAAGAGGTGATGTT +
Preference number: 4 (lower is better)
Translates to: NFPDAGNSWCLCPILTVTPCSLF*DTRGDV
Trigger: AACATCACCTCTTGTGTCCCAGAATAATGAACAAGG...AGTTACTGTGAGAATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CCA 90 bp TTTATTAACAGGGAATGGAGGCACACTACCAACTGGGAACAAATCACCATTCAATTCAGGAGATCAGCTTaGTGGTCTCCAAAATCAAGA +
Preference number: 4 (lower is better)
Translates to: FINREWRHTTNWEQITIQFRRSA*WSPKSR
Trigger: TCTTGATTTTGGAGACCACCAAGCTGATCTCCTGAA...TTGAATGGTGATTTGTTCCCAGTTGGTAGTGTGCCTCCATTCCCTGTTAATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327520.7
CDS-3UTR CCA 90 bp ATAACATTGAATCACAGGAGCTGTGACATATGCTATACTGCTGTGGTGTCAGTATTCAGGAGATCAGCTTaGTGGTCTCCAAAATCAAGA +
Preference number: 4 (lower is better)
Translates to: ITLNHRSCDICYTAVVSVFRRSA*WSPKSR
Trigger: TCTTGATTTTGGAGACCACCAAGCTGATCTCCTGAA...TACTGACACCACAGCAGTATAGCATATGTCACAGCTCCTGTGATTCAATGTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CCA 90 bp AATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTCTCACAGTAACTATCTTCGTATCTTGCTaGCATCATAGTCTTGAAGTC +
Preference number: 4 (lower is better)
Translates to: NFPDAGNSWCLCPILTVTIFVSC*HHSLEV
Trigger: GACTTCAAGACTATGATGCCAGCAAGATACGAAGAT...AGTTACTGTGAGAATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CCA 90 bp AAGTATCATAGTATCAGATGTGATAGAGTAGAATCATTCCCTAGGTCAGCAGCCTTTATTAACAGGGAATaGAGGCACACTACCAACTGG +
Preference number: 4 (lower is better)
Translates to: KYHSIRCDRVESFPRSAAFINRE*RHTTNW
Trigger: CCAGTTGGTAGTGTGCCTCCATTCCCTGTTAATAAA...GGCTGCTGACCTAGGGAATGATTCTACTCTATCACATCTGATACTATGATACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327520.7
CDS-3UTR CCA 90 bp CTGGTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCATGCCAGTAAACCACTaGGTGGCAGAGTCTTGTCTA +
Preference number: 4 (lower is better)
Translates to: LVFVSYSHSNCLNVVKNIMPVNH*VAESCL
Trigger: TAGACAAGACTCTGCCACCCAGTGGTTTACTGGCAT...GATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACACCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CCA 90 bp CTTGGCACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATTTTGGTACAGCAGCTTaGGAGTTCATTGCTGGTCTG +
Preference number: 4 (lower is better)
Translates to: LGTDGFMKLKVSVHTYHHFGTAA*EFIAGL
Trigger: CAGACCAGCAATGAACTCCCAAGCTGCTGTACCAAA...ATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGTGCCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CCA 90 bp AATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTCTCACAGTAACTATCAATAACACATTTTaGTGTGGGTGGTCTGGATAC +
Preference number: 4 (lower is better)
Translates to: NFPDAGNSWCLCPILTVTINNTF*CGWSGY
Trigger: GTATCCAGACCACCCACACCAAAATGTGTTATTGAT...AGTTACTGTGAGAATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CCA 90 bp GTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCAGTGATCCGGCTAGTAAATaGGGTGCAGGAGTTAAGGCA +
Preference number: 4 (lower is better)
Translates to: VFVSYSHSNCLNVVKNISDPASK*GAGVKA
Trigger: TGCCTTAACTCCTGCACCCCATTTACTAGCCGGATC...ACTGATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CCA 90 bp CTTGGCACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATATGAACAGCATGGTGTaGACCACTAGTCAGAGGATG +
Preference number: 4 (lower is better)
Translates to: LGTDGFMKLKVSVHTYHHMNSMV*TTSQRM
Trigger: CATCCTCTGACTAGTGGTCCACACCATGCTGTTCAT...ATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGTGCCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CCA 90 bp ATAACATTGAATCACAGGAGCTGTGACATATGCTATACTGCTGTGGTGTCAGTAAATGGTGGACTGGAATaGGCTGTAATTTTAAGAGGC +
Preference number: 4 (lower is better)
Translates to: ITLNHRSCDICYTAVVSVNGGLE*AVILRG
Trigger: GCCTCTTAAAATTACAGCCCATTCCAGTCCACCATT...TACTGACACCACAGCAGTATAGCATATGTCACAGCTCCTGTGATTCAATGTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CCA 90 bp CTGGTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCGCTGTGATGGATTGGTaGGTGAAATACTGGTGCTCT +
Preference number: 4 (lower is better)
Translates to: LVFVSYSHSNCLNVVKNIAVMDW*VKYWCS
Trigger: AGAGCACCAGTATTTCACCCACCAATCCATCACAGC...GATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACACCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp ACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATTCAAGGGAGCCACTGGCTGACTaGCACTTTTTGAAGATACAC +
Preference number: 4 (lower is better)
Translates to: TDGFMKLKVSVHTYHHSREPLAD*HFLKIH
Trigger: GTGTATCTTCAAAAAGTGTCAGTCAGCCAGTGGCTC...CCTTGAATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp GTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCAGTGAGCCACTGGCTGACTaGCACTTTTTGAAGATACAC +
Preference number: 4 (lower is better)
Translates to: VFVSYSHSNCLNVVKNISEPLAD*HFLKIH
Trigger: GTGTATCTTCAAAAAGTGTCAGTCAGCCAGTGGCTC...ACTGATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp CTTGGCACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATAACCCAGAACTGGGTTaGACAACACTTCCTGTCTTA +
Preference number: 4 (lower is better)
Translates to: LGTDGFMKLKVSVHTYHHNPELG*TTLPVL
Trigger: TAAGACAGGAAGTGTTGTTCAACCCAGTTCTGGGTT...ATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGTGCCAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp GTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCAGTAAAATCAGTTGTGCCTaGGAACCCAGAACTGGGTTG +
Preference number: 4 (lower is better)
Translates to: VFVSYSHSNCLNVVKNISKISCA*EPRTGL
Trigger: CAACCCAGTTCTGGGTTCTCAGGCACAACTGATTTT...ACTGATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp ACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATTCAAGGAAAATCAGTTGTGCCTaGGAACCCAGAACTGGGTTG +
Preference number: 4 (lower is better)
Translates to: TDGFMKLKVSVHTYHHSRKISCA*EPRTGL
Trigger: CAACCCAGTTCTGGGTTCTCAGGCACAACTGATTTT...CCTTGAATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp GTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCAGTGCTTTCACTTTCATCTaGGTCTCCACTTTCAGAGCC +
Preference number: 4 (lower is better)
Translates to: VFVSYSHSNCLNVVKNISAFTFI*VSTFRA
Trigger: GGCTCTGAAAGTGGAGACTCAGATGAAAGTGAAAGC...ACTGATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp TTTATTAACAGGGAATGGAGGCACACTACCAACTGGGAACAAATCACCATTCAATTTAGTCCTTTGCTCTaGCTTGCTTTCACTTTCATC +
Preference number: 4 (lower is better)
Translates to: FINREWRHTTNWEQITIQFSPLL*LAFTFI
Trigger: GATGAAAGTGAAAGCAAGTCAGAGCAAAGGACTAAA...TTGAATGGTGATTTGTTCCCAGTTGGTAGTGTGCCTCCATTCCCTGTTAATAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327520.7
CDS-3UTR TCA 90 bp ACAGATCAGTCTTTTATTAACAGGGAATGGAGGCACACTACCAACTGGGAACAAGTTTCCAACATTCTTTaGAAAGCTTCCAATTACTGC +
Preference number: 4 (lower is better)
Translates to: TDQSFINREWRHTTNWEQVSNIL*KASNYC
Trigger: GCAGTAATTGGAAGCTTTTCAAAGAATGTTGGAAAC...TTGTTCCCAGTTGGTAGTGTGCCTCCATTCCCTGTTAATAAAAGACTGATCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327520.7
CDS-3UTR TCA 90 bp AATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTCTCACAGTAACTGTTTCCAACATTCTTTaGAAAGCTTCCAATTACTGC +
Preference number: 4 (lower is better)
Translates to: NFPDAGNSWCLCPILTVTVSNIL*KASNYC
Trigger: GCAGTAATTGGAAGCTTTTCAAAGAATGTTGGAAAC...AGTTACTGTGAGAATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp CTTTTATTAACAGGGAATGGAGGCACACTACCAACTGGGAACAAATCACCATTCGTTGTTCCTATATCATaGTCTTTAGCAGCAACTACA +
Preference number: 4 (lower is better)
Translates to: LLLTGNGGTLPTGNKSPFVVPIS*SLAATT
Trigger: TGTAGTTGCTGCTAAAGATCATGATATAGGAACAAC...GAATGGTGATTTGTTCCCAGTTGGTAGTGTGCCTCCATTCCCTGTTAATAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327520.7
CDS-3UTR TCA 90 bp AATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTCTCACAGTAACTGTTGTTCCTATATCATaGTCTTTAGCAGCAACTACA +
Preference number: 4 (lower is better)
Translates to: NFPDAGNSWCLCPILTVTVVPIS*SLAATT
Trigger: TGTAGTTGCTGCTAAAGATCATGATATAGGAACAAC...AGTTACTGTGAGAATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp TTTATTAACAGGGAATGGAGGCACACTACCAACTGGGAACAAATCACCATTCAAGAGAATTCCTGCTTTTaGGAGAATGCCATTTCCTTT +
Preference number: 4 (lower is better)
Translates to: FINREWRHTTNWEQITIQENSCF*ENAISF
Trigger: AAAGGAAATGGCATTCTCTCAAAAGCAGGAATTCTC...TTGAATGGTGATTTGTTCCCAGTTGGTAGTGTGCCTCCATTCCCTGTTAATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327520.7
CDS-3UTR TCA 90 bp TTTATTAACAGGGAATGGAGGCACACTACCAACTGGGAACAAATCACCATTCAAATGGTCTTATATTGTTaGATGCCAAGTGAAGGTACG +
Preference number: 4 (lower is better)
Translates to: FINREWRHTTNWEQITIQMVLYC*MPSEGT
Trigger: CGTACCTTCACTTGGCATTCAACAATATAAGACCAT...TTGAATGGTGATTTGTTCCCAGTTGGTAGTGTGCCTCCATTCCCTGTTAATAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327520.7
CDS-3UTR TCA 90 bp ACAGATCAGTCTTTTATTAACAGGGAATGGAGGCACACTACCAACTGGGAACAAAGTTTAAAAAGTACCTaGGCAAAGGGTTTCAACCAA +
Preference number: 4 (lower is better)
Translates to: TDQSFINREWRHTTNWEQSLKST*AKGFNQ
Trigger: TTGGTTGAAACCCTTTGCTCAGGTACTTTTTAAACT...TTGTTCCCAGTTGGTAGTGTGCCTCCATTCCCTGTTAATAAAAGACTGATCTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327520.7
CDS-3UTR TCA 90 bp CTTTTATTAACAGGGAATGGAGGCACACTACCAACTGGGAACAAATCACCATTCATCCTTTCAGAAAGATaGTGTATCAGCACTGAACAT +
Preference number: 4 (lower is better)
Translates to: LLLTGNGGTLPTGNKSPFILSER*CISTEH
Trigger: ATGTTCAGTGCTGATACATCATCTTTCTGAAAGGAT...GAATGGTGATTTGTTCCCAGTTGGTAGTGTGCCTCCATTCCCTGTTAATAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327520.7
CDS-3UTR TCA 90 bp CTGGTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCACGAGACCTGCGTCGTaGTGTAATGCCAATATTTTC +
Preference number: 4 (lower is better)
Translates to: LVFVSYSHSNCLNVVKNITRPAS*CNANIF
Trigger: GAAAATATTGGCATTACATCACGACGCAGGTCTCGT...GATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACACCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp CTGGTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCTGGTATACTGCTATCTaGGCCCTTCCTCTTATTTGG +
Preference number: 4 (lower is better)
Translates to: LVFVSYSHSNCLNVVKNIWYTAI*ALPLIW
Trigger: CCAAATAAGAGGAAGGGCTCAGATAGCAGTATACCA...GATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACACCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp CTTGGCACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATTGGTATACTGCTATCTaGGCCCTTCCTCTTATTTGG +
Preference number: 4 (lower is better)
Translates to: LGTDGFMKLKVSVHTYHHWYTAI*ALPLIW
Trigger: CCAAATAAGAGGAAGGGCTCAGATAGCAGTATACCA...ATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGTGCCAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp AATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTCTCACAGTAACTCTCTGGCTTCTGTTCTaGGGAATTATCTATTATTCT +
Preference number: 4 (lower is better)
Translates to: NFPDAGNSWCLCPILTVTLWLLF*GIIYYS
Trigger: AGAATAATAGATAATTCCTCAGAACAGAAGCCAGAG...AGTTACTGTGAGAATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp GTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCAGTTTATCTTCCTGTATTTaGTCCCAGGGAGGCTGGCTA +
Preference number: 4 (lower is better)
Translates to: VFVSYSHSNCLNVVKNISLSSCI*SQGGWL
Trigger: TAGCCAGCCTCCCTGGGATCAAATACAGGAAGATAA...ACTGATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp AATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTCTCACAGTAACTAACTGTGGACTGTTCTaGCGAATGAATAATCATATC +
Preference number: 4 (lower is better)
Translates to: NFPDAGNSWCLCPILTVTNCGLF*RMNNHI
Trigger: GATATGATTATTCATTCGTCAGAACAGTCCACAGTT...AGTTACTGTGAGAATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp CTTGGCACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATATTAGCTCCTGTTTCTaGCCCAATAAGTGCAGGATC +
Preference number: 4 (lower is better)
Translates to: LGTDGFMKLKVSVHTYHHISSCF*PNKCRI
Trigger: GATCCTGCACTTATTGGGTCAGAAACAGGAGCTAAT...ATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGTGCCAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp CTGGTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCGGAGTTAAGGCAGGATaGTGGGTACCTGGATTTAAA +
Preference number: 4 (lower is better)
Translates to: LVFVSYSHSNCLNVVKNIGVKAG*WVPGFK
Trigger: TTTAAATCCAGGTACCCATCATCCTGCCTTAACTCC...GATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACACCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp CTGGTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCGGTGGCCTCTGTAACTaGTTTAATACTGGATCCACA +
Preference number: 4 (lower is better)
Translates to: LVFVSYSHSNCLNVVKNIGGLCN*FNTGST
Trigger: TGTGGATCCAGTATTAAATCAGTTACAGAGGCCACC...GATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACACCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp GTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCAGTCTTTGGGGTAAACTCTaGGGCACTGAGTGCTTCATT +
Preference number: 4 (lower is better)
Translates to: VFVSYSHSNCLNVVKNISLWGKL*GTECFI
Trigger: AATGAAGCACTCAGTGCCTCAGAGTTTACCCCAAAG...ACTGATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp ACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATTCAAGGAATGAAGTCAGAGTTTaGGGATTAGCTGCTGCCGCT +
Preference number: 4 (lower is better)
Translates to: TDGFMKLKVSVHTYHHSRNEVRV*GLAAAA
Trigger: AGCGGCAGCAGCTAATCCTCAAACTCTGACTTCATT...CCTTGAATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp ATAACATTGAATCACAGGAGCTGTGACATATGCTATACTGCTGTGGTGTCAGTATCCTACAATCATTTCTaGAGGTTGTTACTGAGTGAG +
Preference number: 4 (lower is better)
Translates to: ITLNHRSCDICYTAVVSVSYNHF*RLLLSE
Trigger: CTCACTCAGTAACAACCTTCAGAAATGATTGTAGGA...TACTGACACCACAGCAGTATAGCATATGTCACAGCTCCTGTGATTCAATGTTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp ATAACATTGAATCACAGGAGCTGTGACATATGCTATACTGCTGTGGTGTCAGTACCAATCTTTCAATACTaGACGAGGAATGCCAGTATT +
Preference number: 4 (lower is better)
Translates to: ITLNHRSCDICYTAVVSVPIFQY*TRNASI
Trigger: AATACTGGCATTCCTCGTTCAGTATTGAAAGATTGG...TACTGACACCACAGCAGTATAGCATATGTCACAGCTCCTGTGATTCAATGTTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp ATAACATTGAATCACAGGAGCTGTGACATATGCTATACTGCTGTGGTGTCAGTATTTGCTTCAGCTTCTTaGCTTTACGCCAATCTTTCA +
Preference number: 4 (lower is better)
Translates to: ITLNHRSCDICYTAVVSVFASAS*LYANLS
Trigger: TGAAAGATTGGCGTAAAGTCAAGAAGCTGAAGCAAA...TACTGACACCACAGCAGTATAGCATATGTCACAGCTCCTGTGATTCAATGTTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp CTTGGCACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATTCTACAAAATACTGGTaGGTGAGCTGGTTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: LGTDGFMKLKVSVHTYHHSTKYW*VSWFFS
Trigger: GGAGAAGAACCAGCTCACTCACCAGTATTTTGTAGA...ATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGTGCCAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp CTTGGCACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATGAATCACAGGAGCTGTaGCATATGCTATACTGCTGT +
Preference number: 4 (lower is better)
Translates to: LGTDGFMKLKVSVHTYHHESQEL*HMLYCC
Trigger: ACAGCAGTATAGCATATGTCACAGCTCCTGTGATTC...ATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGTGCCAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR GCA 90 bp ACAGATCAGTCTTTTATTAACAGGGAATGGAGGCACACTACCAACTGGGAACAATCTTTAGAAGCTAACTaGATTGCTGGCATACTATCA +
Preference number: 4 (lower is better)
Translates to: TDQSFINREWRHTTNWEQSLEAN*IAGILS
Trigger: TGATAGTATGCCAGCAATGCAGTTAGCTTCTAAAGA...TTGTTCCCAGTTGGTAGTGTGCCTCCATTCCCTGTTAATAAAAGACTGATCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327520.7
CDS-3UTR GCA 90 bp AATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTCTCACAGTAACTTCTTTAGAAGCTAACTaGATTGCTGGCATACTATCA +
Preference number: 4 (lower is better)
Translates to: NFPDAGNSWCLCPILTVTSLEAN*IAGILS
Trigger: TGATAGTATGCCAGCAATGCAGTTAGCTTCTAAAGA...AGTTACTGTGAGAATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR GCA 90 bp CTGGTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCTACTACAGATTACAGTaGTATCCAGAGGAAGGGAGG +
Preference number: 4 (lower is better)
Translates to: LVFVSYSHSNCLNVVKNIYYRLQ*YPEEGR
Trigger: CCTCCCTTCCTCTGGATAGCACTGTAATCTGTAGTA...GATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACACCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR GCA 90 bp CTTGGCACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATTACTACAGATTACAGTaGTATCCAGAGGAAGGGAGG +
Preference number: 4 (lower is better)
Translates to: LGTDGFMKLKVSVHTYHHYYRLQ*YPEEGR
Trigger: CCTCCCTTCCTCTGGATAGCACTGTAATCTGTAGTA...ATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGTGCCAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR GCA 90 bp CTTGGCACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATCTTGTCTGGGAAGCTTaGCCATTTCCTACAGAGTTT +
Preference number: 4 (lower is better)
Translates to: LGTDGFMKLKVSVHTYHHLVWEA*PFPTEF
Trigger: AAACTCTGTAGGAAATGGGCAAGCTTCCCAGACAAG...ATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGTGCCAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR GCA 90 bp ATAACATTGAATCACAGGAGCTGTGACATATGCTATACTGCTGTGGTGTCAGTATTTTCCCTAAGAGTGTaGATGGCATCTAGAAGATCT +
Preference number: 4 (lower is better)
Translates to: ITLNHRSCDICYTAVVSVFSLRV*MASRRS
Trigger: AGATCTTCTAGATGCCATGCACACTCTTAGGGAAAA...TACTGACACCACAGCAGTATAGCATATGTCACAGCTCCTGTGATTCAATGTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR GCA 90 bp AAGTATCATAGTATCAGATGTGATAGAGTAGAATCATTCCCTAGGTCAGCAGCCCTGCTTTTGAGAGAATaGCATTTCCTTTTGCTATGC +
Preference number: 4 (lower is better)
Translates to: KYHSIRCDRVESFPRSAALLLRE*HFLLLC
Trigger: GCATAGCAAAAGGAAATGGCATTCTCTCAAAAGCAG...GGCTGCTGACCTAGGGAATGATTCTACTCTATCACATCTGATACTATGATACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327520.7
CDS-3UTR GCA 90 bp ATAACATTGAATCACAGGAGCTGTGACATATGCTATACTGCTGTGGTGTCAGTACTGCTTTTGAGAGAATaGCATTTCCTTTTGCTATGC +
Preference number: 4 (lower is better)
Translates to: ITLNHRSCDICYTAVVSVLLLRE*HFLLLC
Trigger: GCATAGCAAAAGGAAATGGCATTCTCTCAAAAGCAG...TACTGACACCACAGCAGTATAGCATATGTCACAGCTCCTGTGATTCAATGTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR GCA 90 bp CTTTTATTAACAGGGAATGGAGGCACACTACCAACTGGGAACAAATCACCATTCTCTTATATTGTTGAATaGCAAGTGAAGGTACGGCAA +
Preference number: 4 (lower is better)
Translates to: LLLTGNGGTLPTGNKSPFSYIVE*QVKVRQ
Trigger: TTGCCGTACCTTCACTTGGCATTCAACAATATAAGA...GAATGGTGATTTGTTCCCAGTTGGTAGTGTGCCTCCATTCCCTGTTAATAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327520.7
CDS-3UTR GCA 90 bp CTGGTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCTGGTCTGGGACTATTTaGTTGGGCACGTGTATAATG +
Preference number: 4 (lower is better)
Translates to: LVFVSYSHSNCLNVVKNIWSGTI*LGTCIM
Trigger: CATTATACACGTGCCCAAGCAAATAGTCCCAGACCA...GATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACACCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR GCA 90 bp GTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCAGTAGCTTGGGAGTTCATTaGTGGTCTGGGACTATTTGC +
Preference number: 4 (lower is better)
Translates to: VFVSYSHSNCLNVVKNISSLGVH*WSGTIC
Trigger: GCAAATAGTCCCAGACCAGCAATGAACTCCCAAGCT...ACTGATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR GCA 90 bp CTGGTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCCTTCATCTGGTATACTaGTATCTGAGCCCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: LVFVSYSHSNCLNVVKNILHLVY*YLSPSS
Trigger: AGAGGAAGGGCTCAGATAGCAGTATACCAGATGAAG...GATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACACCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR GCA 90 bp CTTGGCACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATGGTGGACTTCGCTTATaGAGCTTATCTTCCATGACA +
Preference number: 4 (lower is better)
Translates to: LGTDGFMKLKVSVHTYHHGGLRL*SLSSMT
Trigger: TGTCATGGAAGATAAGCTGCATAAGCGAAGTCCACC...ATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGTGCCAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR GCA 90 bp AATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTCTCACAGTAACTGATGTTCTGGTATCTTaGCTACTAAACCTTCACTTT +
Preference number: 4 (lower is better)
Translates to: NFPDAGNSWCLCPILTVTDVLVS*LLNLHF
Trigger: AAAGTGAAGGTTTAGTAGGCAAGATACCAGAACATC...AGTTACTGTGAGAATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR GCA 90 bp CTGGTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCCCTGTAACTTTCCGCTaGTTTTCTCCACATGCCATT +
Preference number: 4 (lower is better)
Translates to: LVFVSYSHSNCLNVVKNIPVTFR*FSPHAI
Trigger: AATGGCATGTGGAGAAAAGCAGCGGAAAGTTACAGG...GATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACACCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR GCA 90 bp AATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTCTCACAGTAACTATACTGAACGAGGAATaGCAGTATTACTGTTGCTTT +
Preference number: 4 (lower is better)
Translates to: NFPDAGNSWCLCPILTVTILNEE*QYYCCF
Trigger: AAAGCAACAGTAATACTGGCATTCCTCGTTCAGTAT...AGTTACTGTGAGAATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR GCA 90 bp GTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCAGTCTGAACCTGATGAAGTaGTCCCGCTGGCAAAACAAT +
Preference number: 4 (lower is better)
Translates to: VFVSYSHSNCLNVVKNISLNLMK*SRWQNN
Trigger: ATTGTTTTGCCAGCGGGAGCACTTCATCAGGTTCAG...ACTGATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR GCA 90 bp CTGGTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCAGGAGCTGTGACATATaGTATACTGCTGTGGTGTCA +
Preference number: 4 (lower is better)
Translates to: LVFVSYSHSNCLNVVKNIRSCDI*YTAVVS
Trigger: TGACACCACAGCAGTATAGCATATGTCACAGCTCCT...GATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACACCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CCA 90 bp ATAGCTACTTTTCGCCACCCAACTAATATCTGGCTCAAGAACAGATCAGTCTTTTTTAGTATGGTAGTTTaGTTGACTTGTCTGGGAAGC +
Preference number: 4 (lower is better)
Translates to: IATFRHPTNIWLKNRSVFFSMVV*LTCLGS
Trigger: GCTTCCCAGACAAGTCAACCAAACTACCATACTAAA...AAAGACTGATCTGTTCTTGAGCCAGATATTAGTTGGGTGGCGAAAAGTAGCTAT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000327520.7
CDS-3UTR CCA 90 bp TTTATTAACAGGGAATGGAGGCACACTACCAACTGGGAACAAATCACCATTCAACCTTGTTCATTATTCTaGGACACAAGAGGTGATGTT +
Preference number: 4 (lower is better)
Translates to: FINREWRHTTNWEQITIQPCSLF*DTRGDV
Trigger: AACATCACCTCTTGTGTCCCAGAATAATGAACAAGG...TTGAATGGTGATTTGTTCCCAGTTGGTAGTGTGCCTCCATTCCCTGTTAATAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327520.7
CDS-3UTR CCA 90 bp ATAACATTGAATCACAGGAGCTGTGACATATGCTATACTGCTGTGGTGTCAGTACCTTGTTCATTATTCTaGGACACAAGAGGTGATGTT +
Preference number: 4 (lower is better)
Translates to: ITLNHRSCDICYTAVVSVPCSLF*DTRGDV
Trigger: AACATCACCTCTTGTGTCCCAGAATAATGAACAAGG...TACTGACACCACAGCAGTATAGCATATGTCACAGCTCCTGTGATTCAATGTTAT
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CCA 90 bp ATAGCTACTTTTCGCCACCCAACTAATATCTGGCTCAAGAACAGATCAGTCTTTATCTTCGTATCTTGCTaGCATCATAGTCTTGAAGTC +
Preference number: 4 (lower is better)
Translates to: IATFRHPTNIWLKNRSVFIFVSC*HHSLEV
Trigger: GACTTCAAGACTATGATGCCAGCAAGATACGAAGAT...AAAGACTGATCTGTTCTTGAGCCAGATATTAGTTGGGTGGCGAAAAGTAGCTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327520.7
CDS-3UTR CCA 90 bp CTGGTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCTTGGGAGTTCATTGCTaGTCTGGGACTATTTGCTTG +
Preference number: 4 (lower is better)
Translates to: LVFVSYSHSNCLNVVKNILGVHC*SGTICL
Trigger: CAAGCAAATAGTCCCAGACCAGCAATGAACTCCCAA...GATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACACCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CCA 90 bp GTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCAGTTTTGGTACAGCAGCTTaGGAGTTCATTGCTGGTCTG +
Preference number: 4 (lower is better)
Translates to: VFVSYSHSNCLNVVKNISFGTAA*EFIAGL
Trigger: CAGACCAGCAATGAACTCCCAAGCTGCTGTACCAAA...ACTGATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CCA 90 bp CTTGGCACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATTTGGTGTGGGTGGTCTaGATACAAACTTCTCCTTTG +
Preference number: 4 (lower is better)
Translates to: LGTDGFMKLKVSVHTYHHLVWVV*IQTSPL
Trigger: CAAAGGAGAAGTTTGTATCCAGACCACCCACACCAA...ATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGTGCCAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CCA 90 bp ATAACATTGAATCACAGGAGCTGTGACATATGCTATACTGCTGTGGTGTCAGTAAGAGGAAAAGGATGCTaGCTTAGGAAAGGTGAAATA +
Preference number: 4 (lower is better)
Translates to: ITLNHRSCDICYTAVVSVRGKGC*LRKGEI
Trigger: TATTTCACCTTTCCTAAGCCAGCATCCTTTTCCTCT...TACTGACACCACAGCAGTATAGCATATGTCACAGCTCCTGTGATTCAATGTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CCA 90 bp CTTGGCACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATCTCCAGGTAACACAGTaGGAAGTAAATGAGGGTGAT +
Preference number: 4 (lower is better)
Translates to: LGTDGFMKLKVSVHTYHHLQVTQ*EVNEGD
Trigger: ATCACCCTCATTTACTTCCCACTGTGTTACCTGGAG...ATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGTGCCAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CCA 90 bp GTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCAGTAACTGTTGTTGTTGCTaGTGTGCTAGCGCTAAGTGG +
Preference number: 4 (lower is better)
Translates to: VFVSYSHSNCLNVVKNISNCCCC*CASAKW
Trigger: CCACTTAGCGCTAGCACACCAGCAACAACAACAGTT...ACTGATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CCA 90 bp AATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTCTCACAGTAACTATTAACTGCATTTTCTaGGTGAACCCACTTAGAAGA +
Preference number: 4 (lower is better)
Translates to: NFPDAGNSWCLCPILTVTINCIF*VNPLRR
Trigger: TCTTCTAAGTGGGTTCACCCAGAAAATGCAGTTAAT...AGTTACTGTGAGAATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CCA 90 bp CTGGTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCGATGTAGCCAAGGACTaGGAGAATTCCTCCTTAATG +
Preference number: 4 (lower is better)
Translates to: LVFVSYSHSNCLNVVKNIDVAKD*ENSSLM
Trigger: CATTAAGGAGGAATTCTCCCAGTCCTTGGCTACATC...GATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACACCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CCA 90 bp CTTGGCACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATGATCCAGGTCATTTTTaGCTGATGTGGATGCAACAG +
Preference number: 4 (lower is better)
Translates to: LGTDGFMKLKVSVHTYHHDPGHF*LMWMQQ
Trigger: CTGTTGCATCCACATCAGCCAAAAATGACCTGGATC...ATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGTGCCAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CCA 90 bp ATAACATTGAATCACAGGAGCTGTGACATATGCTATACTGCTGTGGTGTCAGTACCTTCACTTTCTGGTTaGTGTTTAATCAAAGGTGGA +
Preference number: 4 (lower is better)
Translates to: ITLNHRSCDICYTAVVSVPSLSG*CLIKGG
Trigger: TCCACCTTTGATTAAACACCAACCAGAAAGTGAAGG...TACTGACACCACAGCAGTATAGCATATGTCACAGCTCCTGTGATTCAATGTTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CCA 90 bp GTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCAGTGCTGTGATGGATTGGTaGGTGAAATACTGGTGCTCT +
Preference number: 4 (lower is better)
Translates to: VFVSYSHSNCLNVVKNISAVMDW*VKYWCS
Trigger: AGAGCACCAGTATTTCACCCACCAATCCATCACAGC...ACTGATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
3UTR CAA 72 bp ATGCCAAGTGAAGGTACGGCAACAATGAATAAGTCCTaGCTTGAGGGGAAGAGATATTATTTGCAAACTAAC +
Preference number: 4 (lower is better)
Translates to: MPSEGTATMNKS*LEGKRYYLQTN
Trigger: GTTAGTTTGCAAATAATATCTCTTCCCCTCAAGCAAGGACTTATTCATTGTTGCCGTACCTTCACTTGGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327520.7
CDS-3UTR TCA 90 bp GTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCAGTAACCCAGAACTGGGTTaGACAACACTTCCTGTCTTA +
Preference number: 4 (lower is better)
Translates to: VFVSYSHSNCLNVVKNISNPELG*TTLPVL
Trigger: TAAGACAGGAAGTGTTGTTCAACCCAGTTCTGGGTT...ACTGATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp GTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCAGTTTACTACTTTTATACTaGGCTGCAGCCAATGCTGCC +
Preference number: 4 (lower is better)
Translates to: VFVSYSHSNCLNVVKNISLLLLY*AAANAA
Trigger: GGCAGCATTGGCTGCAGCTCAGTATAAAAGTAGTAA...ACTGATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp GTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCAGTATTTTTATCTTCTTCTaGGTGTCTGGTGAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: VFVSYSHSNCLNVVKNISIFIFF*VSGEPG
Trigger: GCCTGGCTCACCAGACACTCAGAAGAAGATAAAAAT...ACTGATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp ATAGCTACTTTTCGCCACCCAACTAATATCTGGCTCAAGAACAGATCAGTCTTTCATTGGCATTTGAAATaGTGCTATCTTTGCAGTTCA +
Preference number: 4 (lower is better)
Translates to: IATFRHPTNIWLKNRSVFHWHLK*CYLCSS
Trigger: TGAACTGCAAAGATAGCATCATTTCAAATGCCAATG...AAAGACTGATCTGTTCTTGAGCCAGATATTAGTTGGGTGGCGAAAAGTAGCTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327520.7
CDS-3UTR TCA 90 bp ACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATTCAAGGGTCAATGCAGGCCACTaGATCTGTTTGCTCTTTGAT +
Preference number: 4 (lower is better)
Translates to: TDGFMKLKVSVHTYHHSRVNAGH*ICLLFD
Trigger: ATCAAAGAGCAAACAGATTCAGTGGCCTGCATTGAC...CCTTGAATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399262.7
CDS-3UTR TCA 90 bp ACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATTCAAGGACGAGACCTGCGTCGTaGTGTAATGCCAATATTTTC +
Preference number: 4 (lower is better)
Translates to: TDGFMKLKVSVHTYHHSRTRPAS*CNANIF
Trigger: GAAAATATTGGCATTACATCACGACGCAGGTCTCGT...CCTTGAATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp GTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCAGTACGAGACCTGCGTCGTaGTGTAATGCCAATATTTTC +
Preference number: 4 (lower is better)
Translates to: VFVSYSHSNCLNVVKNISTRPAS*CNANIF
Trigger: GAAAATATTGGCATTACATCACGACGCAGGTCTCGT...ACTGATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp ATAACATTGAATCACAGGAGCTGTGACATATGCTATACTGCTGTGGTGTCAGTACTCTGGCTTCTGTTCTaGGGAATTATCTATTATTCT +
Preference number: 4 (lower is better)
Translates to: ITLNHRSCDICYTAVVSVLWLLF*GIIYYS
Trigger: AGAATAATAGATAATTCCTCAGAACAGAAGCCAGAG...TACTGACACCACAGCAGTATAGCATATGTCACAGCTCCTGTGATTCAATGTTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp ATAACATTGAATCACAGGAGCTGTGACATATGCTATACTGCTGTGGTGTCAGTAGTACTTGAGTTTTCCTaGGCCACCTTTTCTAAATTA +
Preference number: 4 (lower is better)
Translates to: ITLNHRSCDICYTAVVSVVLEFS*ATFSKL
Trigger: TAATTTAGAAAAGGTGGCTCAGGAAAACTCAAGTAC...TACTGACACCACAGCAGTATAGCATATGTCACAGCTCCTGTGATTCAATGTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp CTGGTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCCGAGTAGGAATTGGATaGAAACTGCATCTTGATAGC +
Preference number: 4 (lower is better)
Translates to: LVFVSYSHSNCLNVVKNIRVGIG*KLHLDS
Trigger: GCTATCAAGATGCAGTTTTCATCCAATTCCTACTCG...GATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACACCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp GTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCAGTATTAGCTCCTGTTTCTaGCCCAATAAGTGCAGGATC +
Preference number: 4 (lower is better)
Translates to: VFVSYSHSNCLNVVKNISISSCF*PNKCRI
Trigger: GATCCTGCACTTATTGGGTCAGAAACAGGAGCTAAT...ACTGATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp ACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATTCAAGGGTAGGTAATGGAGTTTaGCTAGATGATCCGGCTAGT +
Preference number: 4 (lower is better)
Translates to: TDGFMKLKVSVHTYHHSRVGNGV*LDDPAS
Trigger: ACTAGCCGGATCATCTAGTCAAACTCCATTACCTAC...CCTTGAATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp CTTGGCACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATCCACTAGTCAGAGGATaGGTGTTAATGGTAGGTAAT +
Preference number: 4 (lower is better)
Translates to: LGTDGFMKLKVSVHTYHHPLVRG*VLMVGN
Trigger: ATTACCTACCATTAACACTCATCCTCTGACTAGTGG...ATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGTGCCAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp CTTGGCACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATGGTCTGACAGGAATGTaGCTAAGTAATCCAATACCA +
Preference number: 4 (lower is better)
Translates to: LGTDGFMKLKVSVHTYHHGLTGM*LSNPIP
Trigger: TGGTATTGGATTACTTAGTCACATTCCTGTCAGACC...ATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGTGCCAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp CTTGGCACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATTTCTTTGGATGGGTATaGTCTTGGTGGTTCATTGAC +
Preference number: 4 (lower is better)
Translates to: LGTDGFMKLKVSVHTYHHFFGWV*SWWFID
Trigger: GTCAATGAACCACCAAGATCATACCCATCCAAAGAA...ATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGTGCCAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp CTTGGCACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATTCTGAAGGTTGTTACTaGGTGAGATGCAATCTGATG +
Preference number: 4 (lower is better)
Translates to: LGTDGFMKLKVSVHTYHHSEGCY*VRCNLM
Trigger: CATCAGATTGCATCTCACTCAGTAACAACCTTCAGA...ATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGTGCCAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp CTGGTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCTCTGAAGGTTGTTACTaGGTGAGATGCAATCTGATG +
Preference number: 4 (lower is better)
Translates to: LVFVSYSHSNCLNVVKNISEGCY*VRCNLM
Trigger: CATCAGATTGCATCTCACTCAGTAACAACCTTCAGA...GATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACACCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp ACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATTCAAGGAGTTGGAGGCTTCTGTaGTTCTTGAACTTTACCACC +
Preference number: 4 (lower is better)
Translates to: TDGFMKLKVSVHTYHHSRSWRLL*FLNFTT
Trigger: GGTGGTAAAGTTCAAGAATCACAGAAGCCTCCAACT...CCTTGAATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp ATAACATTGAATCACAGGAGCTGTGACATATGCTATACTGCTGTGGTGTCAGTACGTCAAACTCTGTTCTaGAGAACTCTTAAAATTTGC +
Preference number: 4 (lower is better)
Translates to: ITLNHRSCDICYTAVVSVRQTLF*RTLKIC
Trigger: GCAAATTTTAAGAGTTCTTCAGAACAGAGTTTGACG...TACTGACACCACAGCAGTATAGCATATGTCACAGCTCCTGTGATTCAATGTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp CTTGGCACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATCAAAATACTGGTGAGTaGGCTGGTTCTTCTCCTTTT +
Preference number: 4 (lower is better)
Translates to: LGTDGFMKLKVSVHTYHHQNTGE*AGSSPF
Trigger: AAAAGGAGAAGAACCAGCTCACTCACCAGTATTTTG...ATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGTGCCAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp ACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATTCAAGGTCTACAAAATACTGGTaGGTGAGCTGGTTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: TDGFMKLKVSVHTYHHSRSTKYW*VSWFFS
Trigger: GGAGAAGAACCAGCTCACTCACCAGTATTTTGTAGA...CCTTGAATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp GTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCAGTGCATCACCAAGGAACTaGATAAGAGTACAGGTTCTG +
Preference number: 4 (lower is better)
Translates to: VFVSYSHSNCLNVVKNISASPRN*IRVQVL
Trigger: CAGAACCTGTACTCTTATTCAGTTCCTTGGTGATGC...ACTGATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp CTGGTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCGCACTGATGGTTTTATaGAGCTTAAAGTCAGTGTGC +
Preference number: 4 (lower is better)
Translates to: LVFVSYSHSNCLNVVKNIALMVL*SLKSVC
Trigger: GCACACTGACTTTAAGCTTCATAAAACCATCAGTGC...GATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACACCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp CTGGTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCTTTCTGATTATGACATaGCTGCTGTGCGATTCAGCA +
Preference number: 4 (lower is better)
Translates to: LVFVSYSHSNCLNVVKNIFLIMT*LLCDSA
Trigger: TGCTGAATCGCACAGCAGTCATGTCATAATCAGAAA...GATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACACCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399262.7
ENST00000639129.1
CDS-3UTR TCA 90 bp ACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATTCAAGGTCTCCAACGAGCAAATaGCGATTTTCTGTCTGCTCT +
Preference number: 4 (lower is better)
Translates to: TDGFMKLKVSVHTYHHSRSPTSK*RFSVCS
Trigger: AGAGCAGACAGAAAATCGTCATTTGCTCGTTGGAGA...CCTTGAATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542921.5
CDS-3UTR GCA 90 bp GTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCAGTACTTTTATACTGAGCTaGAGCCAATGCTGCCTTGTG +
Preference number: 4 (lower is better)
Translates to: VFVSYSHSNCLNVVKNISTFILS*SQCCLV
Trigger: CACAAGGCAGCATTGGCTGCAGCTCAGTATAAAAGT...ACTGATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR GCA 90 bp GTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCAGTTCCTCTCTGGCTTTTTaGTCTGCAAGATCTGCTAAC +
Preference number: 4 (lower is better)
Translates to: VFVSYSHSNCLNVVKNISSSLAF*SARSAN
Trigger: GTTAGCAGATCTTGCAGAGCAAAAAGCCAGAGAGGA...ACTGATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR GCA 90 bp ACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATTCAAGGTCCTCTCTGGCTTTTTaGTCTGCAAGATCTGCTAAC +
Preference number: 4 (lower is better)
Translates to: TDGFMKLKVSVHTYHHSRSSLAF*SARSAN
Trigger: GTTAGCAGATCTTGCAGAGCAAAAAGCCAGAGAGGA...CCTTGAATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR GCA 90 bp ATAGCTACTTTTCGCCACCCAACTAATATCTGGCTCAAGAACAGATCAGTCTTTATGTTCATTTTCTTATaGACACCAGAAACCACTGCA +
Preference number: 4 (lower is better)
Translates to: IATFRHPTNIWLKNRSVFMFIFL*TPETTA
Trigger: TGCAGTGGTTTCTGGTGTGCATAAGAAAATGAACAT...AAAGACTGATCTGTTCTTGAGCCAGATATTAGTTGGGTGGCGAAAAGTAGCTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327520.7
CDS-3UTR GCA 90 bp ATAACATTGAATCACAGGAGCTGTGACATATGCTATACTGCTGTGGTGTCAGTAATGTTCATTTTCTTATaGACACCAGAAACCACTGCA +
Preference number: 4 (lower is better)
Translates to: ITLNHRSCDICYTAVVSVMFIFL*TPETTA
Trigger: TGCAGTGGTTTCTGGTGTGCATAAGAAAATGAACAT...TACTGACACCACAGCAGTATAGCATATGTCACAGCTCCTGTGATTCAATGTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR GCA 90 bp TTTATTAACAGGGAATGGAGGCACACTACCAACTGGGAACAAATCACCATTCAACCACTCTTGTTTTTCTaGCGTTTTGAAACTTCTTCA +
Preference number: 4 (lower is better)
Translates to: FINREWRHTTNWEQITIQPLLFF*RFETSS
Trigger: TGAAGAAGTTTCAAAACGGCAGAAAAACAAGAGTGG...TTGAATGGTGATTTGTTCCCAGTTGGTAGTGTGCCTCCATTCCCTGTTAATAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327520.7
CDS-3UTR GCA 90 bp AATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTCTCACAGTAACTGAATTGGATGAAAACTaGATCTTGATAGCTCATGTT +
Preference number: 4 (lower is better)
Translates to: NFPDAGNSWCLCPILTVTELDEN*ILIAHV
Trigger: AACATGAGCTATCAAGATGCAGTTTTCATCCAATTC...AGTTACTGTGAGAATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR GCA 90 bp CTGGTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCAGCTTCAGCATTAACTaGATTTTCTGGGTGAACCCA +
Preference number: 4 (lower is better)
Translates to: LVFVSYSHSNCLNVVKNISFSIN*IFWVNP
Trigger: TGGGTTCACCCAGAAAATGCAGTTAATGCTGAAGCT...GATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACACCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR GCA 90 bp ATAACATTGAATCACAGGAGCTGTGACATATGCTATACTGCTGTGGTGTCAGTAGATGTTCTGGTATCTTaGCTACTAAACCTTCACTTT +
Preference number: 4 (lower is better)
Translates to: ITLNHRSCDICYTAVVSVDVLVS*LLNLHF
Trigger: AAAGTGAAGGTTTAGTAGGCAAGATACCAGAACATC...TACTGACACCACAGCAGTATAGCATATGTCACAGCTCCTGTGATTCAATGTTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR GCA 90 bp CTGGTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCAAAGACTACTATAGCTaGCTTCCTTTCTTTCCAGGC +
Preference number: 4 (lower is better)
Translates to: LVFVSYSHSNCLNVVKNIKDYYS*LPFFPG
Trigger: GCCTGGAAAGAAAGGAAGGCAGCTATAGTAGTCTTT...GATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACACCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR GCA 90 bp GTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCAGTCCTGTAACTTTCCGCTaGTTTTCTCCACATGCCATT +
Preference number: 4 (lower is better)
Translates to: VFVSYSHSNCLNVVKNISPVTFR*FSPHAI
Trigger: AATGGCATGTGGAGAAAAGCAGCGGAAAGTTACAGG...ACTGATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR GCA 90 bp ACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATTCAAGGCCTGTAACTTTCCGCTaGTTTTCTCCACATGCCATT +
Preference number: 4 (lower is better)
Translates to: TDGFMKLKVSVHTYHHSRPVTFR*FSPHAI
Trigger: AATGGCATGTGGAGAAAAGCAGCGGAAAGTTACAGG...CCTTGAATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR GCA 90 bp GTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCAGTAGGAGCTGTGACATATaGTATACTGCTGTGGTGTCA +
Preference number: 4 (lower is better)
Translates to: VFVSYSHSNCLNVVKNISRSCDI*YTAVVS
Trigger: TGACACCACAGCAGTATAGCATATGTCACAGCTCCT...ACTGATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CCA 90 bp ACAGATCAGTCTTTTATTAACAGGGAATGGAGGCACACTACCAACTGGGAACAATTTTCCAGGCAATTTTaGTATTACTGTTGCTTTGCA +
Preference number: 4 (lower is better)
Translates to: TDQSFINREWRHTTNWEQFSRQF*YYCCFA
Trigger: TGCAAAGCAACAGTAATACCAAAATTGCCTGGAAAA...TTGTTCCCAGTTGGTAGTGTGCCTCCATTCCCTGTTAATAAAAGACTGATCTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327520.7
CDS-3UTR CCA 90 bp GTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCAGTTTGGGAGTTCATTGCTaGTCTGGGACTATTTGCTTG +
Preference number: 4 (lower is better)
Translates to: VFVSYSHSNCLNVVKNISLGVHC*SGTICL
Trigger: CAAGCAAATAGTCCCAGACCAGCAATGAACTCCCAA...ACTGATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CCA 90 bp GTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCAGTTTGGTGTGGGTGGTCTaGATACAAACTTCTCCTTTG +
Preference number: 4 (lower is better)
Translates to: VFVSYSHSNCLNVVKNISLVWVV*IQTSPL
Trigger: CAAAGGAGAAGTTTGTATCCAGACCACCCACACCAA...ACTGATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CCA 90 bp ACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATTCAAGGTATAGTCTCTGGAGGTaGACTTCGCTTATGCAGCTT +
Preference number: 4 (lower is better)
Translates to: TDGFMKLKVSVHTYHHSRYSLWR*TSLMQL
Trigger: AAGCTGCATAAGCGAAGTCCACCTCCAGAGACTATA...CCTTGAATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CCA 90 bp GTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCAGTCTCCAGGTAACACAGTaGGAAGTAAATGAGGGTGAT +
Preference number: 4 (lower is better)
Translates to: VFVSYSHSNCLNVVKNISLQVTQ*EVNEGD
Trigger: ATCACCCTCATTTACTTCCCACTGTGTTACCTGGAG...ACTGATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CCA 90 bp ATAACATTGAATCACAGGAGCTGTGACATATGCTATACTGCTGTGGTGTCAGTAATTAACTGCATTTTCTaGGTGAACCCACTTAGAAGA +
Preference number: 4 (lower is better)
Translates to: ITLNHRSCDICYTAVVSVINCIF*VNPLRR
Trigger: TCTTCTAAGTGGGTTCACCCAGAAAATGCAGTTAAT...TACTGACACCACAGCAGTATAGCATATGTCACAGCTCCTGTGATTCAATGTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CCA 90 bp CTTGGCACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATCATTTTTGGCTGATGTaGATGCAACAGACCGTAATG +
Preference number: 4 (lower is better)
Translates to: LGTDGFMKLKVSVHTYHHHFWLM*MQQTVM
Trigger: CATTACGGTCTGTTGCATCCACATCAGCCAAAAATG...ATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGTGCCAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CCA 90 bp GTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCAGTGATCCAGGTCATTTTTaGCTGATGTGGATGCAACAG +
Preference number: 4 (lower is better)
Translates to: VFVSYSHSNCLNVVKNISDPGHF*LMWMQQ
Trigger: CTGTTGCATCCACATCAGCCAAAAATGACCTGGATC...ACTGATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CCA 90 bp ACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATTCAAGGGATCCAGGTCATTTTTaGCTGATGTGGATGCAACAG +
Preference number: 4 (lower is better)
Translates to: TDGFMKLKVSVHTYHHSRDPGHF*LMWMQQ
Trigger: CTGTTGCATCCACATCAGCCAAAAATGACCTGGATC...CCTTGAATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CCA 90 bp AATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTCTCACAGTAACTTCTTGTTTGATGATATaGCTTTTAGGACTGGAAGAT +
Preference number: 4 (lower is better)
Translates to: NFPDAGNSWCLCPILTVTSCLMI*LLGLED
Trigger: ATCTTCCAGTCCTAAAAGCCATATCATCAAACAAGA...AGTTACTGTGAGAATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CCA 90 bp AATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTCTCACAGTAACTTATTTGAAACTTCTTTaGATGGGTATGATCTTGGTG +
Preference number: 4 (lower is better)
Translates to: NFPDAGNSWCLCPILTVTYLKLL*MGMILV
Trigger: CACCAAGATCATACCCATCCAAAGAAGTTTCAAATA...AGTTACTGTGAGAATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CCA 90 bp ATAACATTGAATCACAGGAGCTGTGACATATGCTATACTGCTGTGGTGTCAGTAAGATGCAATCTGATGTaGAAGATGTTCTGGTATCTT +
Preference number: 4 (lower is better)
Translates to: ITLNHRSCDICYTAVVSVRCNLM*KMFWYL
Trigger: AAGATACCAGAACATCTTCCACATCAGATTGCATCT...TACTGACACCACAGCAGTATAGCATATGTCACAGCTCCTGTGATTCAATGTTAT
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp ACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATTCAAGGTCACATTTGGCAAAATaGTTCTTCCAGTTTCTCCGG +
Preference number: 4 (lower is better)
Translates to: TDGFMKLKVSVHTYHHSRSHLAK*FFQFLR
Trigger: CCGGAGAAACTGGAAGAATCATTTTGCCAAATGTGA...CCTTGAATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp GTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCAGTTCACATTTGGCAAAATaGTTCTTCCAGTTTCTCCGG +
Preference number: 4 (lower is better)
Translates to: VFVSYSHSNCLNVVKNISSHLAK*FFQFLR
Trigger: CCGGAGAAACTGGAAGAATCATTTTGCCAAATGTGA...ACTGATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp ACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATTCAAGGTATCGGCAGCAGATGTaGTTACATCCGTTTTGGTAT +
Preference number: 4 (lower is better)
Translates to: TDGFMKLKVSVHTYHHSRYRQQM*LHPFWY
Trigger: ATACCAAAACGGATGTAATCACATCTGCTGCCGATA...CCTTGAATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp CTTGGCACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATTTTAGTCCTTTGCTCTaGCTTGCTTTCACTTTCATC +
Preference number: 4 (lower is better)
Translates to: LGTDGFMKLKVSVHTYHHFSPLL*LAFTFI
Trigger: GATGAAAGTGAAAGCAAGTCAGAGCAAAGGACTAAA...ATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGTGCCAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp CTGGTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCTTTAGTCCTTTGCTCTaGCTTGCTTTCACTTTCATC +
Preference number: 4 (lower is better)
Translates to: LVFVSYSHSNCLNVVKNIFSPLL*LAFTFI
Trigger: GATGAAAGTGAAAGCAAGTCAGAGCAAAGGACTAAA...GATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACACCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp CTGGTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCTTTTGGCAGACCCAGTaGATGTTAAACAATGTTGCT +
Preference number: 4 (lower is better)
Translates to: LVFVSYSHSNCLNVVKNIFWQTQ*MLNNVA
Trigger: AGCAACATTGTTTAACATTCACTGGGTCTGCCAAAA...GATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACACCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp GTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCAGTCTTGAAGTCTTCTCCTaGAGGCCAGTCTTTCAATTT +
Preference number: 4 (lower is better)
Translates to: VFVSYSHSNCLNVVKNISLEVFS*RPVFQF
Trigger: AAATTGAAAGACTGGCCTTCAGGAGAAGACTTCAAG...ACTGATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp CTGGTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCGAGAATTCCTGCTTTTaGGAGAATGCCATTTCCTTT +
Preference number: 4 (lower is better)
Translates to: LVFVSYSHSNCLNVVKNIENSCF*ENAISF
Trigger: AAAGGAAATGGCATTCTCTCAAAAGCAGGAATTCTC...GATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACACCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp CTTGGCACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATGAGAATTCCTGCTTTTaGGAGAATGCCATTTCCTTT +
Preference number: 4 (lower is better)
Translates to: LGTDGFMKLKVSVHTYHHENSCF*ENAISF
Trigger: AAAGGAAATGGCATTCTCTCAAAAGCAGGAATTCTC...ATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGTGCCAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp CTTGGCACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATTTCTACTGCAGTGACTaGACTGGGTATATTTCTTTC +
Preference number: 4 (lower is better)
Translates to: LGTDGFMKLKVSVHTYHHFYCSD*TGYISF
Trigger: GAAAGAAATATACCCAGTTCAGTCACTGCAGTAGAA...ATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGTGCCAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399262.7
ENST00000542921.5
CDS-3UTR TCA 90 bp ACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATTCAAGGGGAATTCTACTGCAGTaGCTGAACTGGGTATATTTC +
Preference number: 4 (lower is better)
Translates to: TDGFMKLKVSVHTYHHSRGILLQ*LNWVYF
Trigger: GAAATATACCCAGTTCAGTCACTGCAGTAGAATTCC...CCTTGAATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399262.7
ENST00000542921.5
CDS-3UTR TCA 90 bp GTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCAGTGGAATTCTACTGCAGTaGCTGAACTGGGTATATTTC +
Preference number: 4 (lower is better)
Translates to: VFVSYSHSNCLNVVKNISGILLQ*LNWVYF
Trigger: GAAATATACCCAGTTCAGTCACTGCAGTAGAATTCC...ACTGATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399262.7
ENST00000542921.5
CDS-3UTR TCA 90 bp CTGGTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCTGTGGTTCTAGTACCTaGTCATTCATAACGATCATG +
Preference number: 4 (lower is better)
Translates to: LVFVSYSHSNCLNVVKNICGSST*SFITIM
Trigger: CATGATCGTTATGAATGATCAGGTACTAGAACCACA...GATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACACCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp GTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCAGTGCTCTCAGAAAAGTCTaGAACATTGTCAGTTCGAAG +
Preference number: 4 (lower is better)
Translates to: VFVSYSHSNCLNVVKNISALRKV*NIVSSK
Trigger: CTTCGAACTGACAATGTTTCAGACTTTTCTGAGAGC...ACTGATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp ACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATTCAAGGCGAGTAGGAATTGGATaGAAACTGCATCTTGATAGC +
Preference number: 4 (lower is better)
Translates to: TDGFMKLKVSVHTYHHSRRVGIG*KLHLDS
Trigger: GCTATCAAGATGCAGTTTTCATCCAATTCCTACTCG...CCTTGAATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp GTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCAGTTCTGAAGGTTGTTACTaGGTGAGATGCAATCTGATG +
Preference number: 4 (lower is better)
Translates to: VFVSYSHSNCLNVVKNISSEGCY*VRCNLM
Trigger: CATCAGATTGCATCTCACTCAGTAACAACCTTCAGA...ACTGATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp GTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCAGTGGCTTCTGTGATTCTTaGACTTTACCACCAGCATTT +
Preference number: 4 (lower is better)
Translates to: VFVSYSHSNCLNVVKNISGFCDS*TLPPAF
Trigger: AAATGCTGGTGGTAAAGTTCAAGAATCACAGAAGCC...ACTGATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp CTGGTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCCCAATCTTTCAATACTaGACGAGGAATGCCAGTATT +
Preference number: 4 (lower is better)
Translates to: LVFVSYSHSNCLNVVKNIPIFQY*TRNASI
Trigger: AATACTGGCATTCCTCGTTCAGTATTGAAAGATTGG...GATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACACCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp ACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATTCAAGGCAAAATACTGGTGAGTaGGCTGGTTCTTCTCCTTTT +
Preference number: 4 (lower is better)
Translates to: TDGFMKLKVSVHTYHHSRQNTGE*AGSSPF
Trigger: AAAAGGAGAAGAACCAGCTCACTCACCAGTATTTTG...CCTTGAATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR GCA 90 bp GTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCAGTTTAACTTGTTATCTGTaGCTACATCACTCTCTGGGC +
Preference number: 4 (lower is better)
Translates to: VFVSYSHSNCLNVVKNISLTCYL*LHHSLG
Trigger: GCCCAGAGAGTGATGTAGGCACAGATAACAAGTTAA...ACTGATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR GCA 90 bp ACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATTCAAGGTTAACTTGTTATCTGTaGCTACATCACTCTCTGGGC +
Preference number: 4 (lower is better)
Translates to: TDGFMKLKVSVHTYHHSRLTCYL*LHHSLG
Trigger: GCCCAGAGAGTGATGTAGGCACAGATAACAAGTTAA...CCTTGAATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR GCA 90 bp GTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCAGTCAAGAGGTGATGTTCTaGCATTTGGAGATTCAGAGT +
Preference number: 4 (lower is better)
Translates to: VFVSYSHSNCLNVVKNISQEVMF*HLEIQS
Trigger: ACTCTGAATCTCCAAATGGCAGAACATCACCTCTTG...ACTGATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR GCA 90 bp ATAGCTACTTTTCGCCACCCAACTAATATCTGGCTCAAGAACAGATCAGTCTTTTTCTTTCAGAGTATATaGCAACTACAGTCAAGGTAT +
Preference number: 4 (lower is better)
Translates to: IATFRHPTNIWLKNRSVFFFQSI*QLQSRY
Trigger: ATACCTTGACTGTAGTTGGCATATACTCTGAAAGAA...AAAGACTGATCTGTTCTTGAGCCAGATATTAGTTGGGTGGCGAAAAGTAGCTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327520.7
CDS-3UTR GCA 90 bp GTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCAGTCGGATACTTCTTTGTTaGTGTTGCTGGTGTGTATTC +
Preference number: 4 (lower is better)
Translates to: VFVSYSHSNCLNVVKNISRILLC*CCWCVF
Trigger: GAATACACACCAGCAACAGCAACAAAGAAGTATCCG...ACTGATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR GCA 90 bp ACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATTCAAGGAAAGACTACTATAGCTaGCTTCCTTTCTTTCCAGGC +
Preference number: 4 (lower is better)
Translates to: TDGFMKLKVSVHTYHHSRKDYYS*LPFFPG
Trigger: GCCTGGAAAGAAAGGAAGGCAGCTATAGTAGTCTTT...CCTTGAATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CCA 90 bp ATAGCTACTTTTCGCCACCCAACTAATATCTGGCTCAAGAACAGATCAGTCTTTGAACCAGGTATAATTTaGGTTGGCATTAAATGTTTG +
Preference number: 4 (lower is better)
Translates to: IATFRHPTNIWLKNRSVFEPGII*VGIKCL
Trigger: CAAACATTTAATGCCAACCCAAATTATACCTGGTTC...AAAGACTGATCTGTTCTTGAGCCAGATATTAGTTGGGTGGCGAAAAGTAGCTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327520.7
CDS-3UTR CCA 90 bp CTTGGCACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATTTGGCCCAGATTAAGTaGTATTCCACCAAGAAAGTT +
Preference number: 4 (lower is better)
Translates to: LGTDGFMKLKVSVHTYHHLAQIK*YSTKKV
Trigger: AACTTTCTTGGTGGAATACCACTTAATCTGGGCCAA...ATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGTGCCAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399262.7
CDS-3UTR CCA 90 bp CTTGGCACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATCTTTGTTGCTGTTGCTaGTGTGTATTCTGTTTTGGT +
Preference number: 4 (lower is better)
Translates to: LGTDGFMKLKVSVHTYHHLCCCC*CVFCFG
Trigger: ACCAAAACAGAATACACACCAGCAACAGCAACAAAG...ATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGTGCCAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CCA 90 bp GTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCAGTGCCCTTCCTCTTATTTaGACGGATACTTCTTTGTTG +
Preference number: 4 (lower is better)
Translates to: VFVSYSHSNCLNVVKNISALPLI*TDTSLL
Trigger: CAACAAAGAAGTATCCGTCCAAATAAGAGGAAGGGC...ACTGATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CCA 90 bp ACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATTCAAGGACATTTTGGTGTGGGTaGTCTGGATACAAACTTCTC +
Preference number: 4 (lower is better)
Translates to: TDGFMKLKVSVHTYHHSRTFWCG*SGYKLL
Trigger: GAGAAGTTTGTATCCAGACCACCCACACCAAAATGT...CCTTGAATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CCA 90 bp CTGGTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCATCAATAACACATTTTaGTGTGGGTGGTCTGGATAC +
Preference number: 4 (lower is better)
Translates to: LVFVSYSHSNCLNVVKNIINNTF*CGWSGY
Trigger: GTATCCAGACCACCCACACCAAAATGTGTTATTGAT...GATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACACCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CCA 90 bp CTTGGCACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATAGATTTTATAGTCTCTaGAGGTGGACTTCGCTTATG +
Preference number: 4 (lower is better)
Translates to: LGTDGFMKLKVSVHTYHHRFYSL*RWTSLM
Trigger: CATAAGCGAAGTCCACCTCCAGAGACTATAAAATCT...ATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGTGCCAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CCA 90 bp CTGGTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCAGAGGAAAAGGATGCTaGCTTAGGAAAGGTGAAATA +
Preference number: 4 (lower is better)
Translates to: LVFVSYSHSNCLNVVKNIRGKGC*LRKGEI
Trigger: TATTTCACCTTTCCTAAGCCAGCATCCTTTTCCTCT...GATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACACCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CCA 90 bp CTGGTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCCCTTCACTTTCTGGTTaGTGTTTAATCAAAGGTGGA +
Preference number: 4 (lower is better)
Translates to: LVFVSYSHSNCLNVVKNIPSLSG*CLIKGG
Trigger: TCCACCTTTGATTAAACACCAACCAGAAAGTGAAGG...GATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACACCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CCA 90 bp CTGGTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCGAAGAAACTGTCAAATaGGTAGGACTCCTACAATCA +
Preference number: 4 (lower is better)
Translates to: LVFVSYSHSNCLNVVKNIEETVK*VGLLQS
Trigger: TGATTGTAGGAGTCCTACCCATTTGACAGTTTCTTC...GATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACACCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CCA 90 bp CTTGGCACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATTTTTGTACTAGAAGATaGACGCACAATGACAGATGC +
Preference number: 4 (lower is better)
Translates to: LGTDGFMKLKVSVHTYHHFCTRR*THNDRC
Trigger: GCATCTGTCATTGTGCGTCCATCTTCTAGTACAAAA...ATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGTGCCAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CCA 90 bp CTGGTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCGCTTCATCATCATATTaGTCAGGAGAAGAGAAACCA +
Preference number: 4 (lower is better)
Translates to: LVFVSYSHSNCLNVVKNIASSSY*SGEEKP
Trigger: TGGTTTCTCTTCTCCTGACCAATATGATGATGAAGC...GATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACACCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
3UTR CAA 72 bp AAGATCCTACCTTCTTTAGACGTTTCCATGAAATATTaGTTTTTACATCCCGCGACTCCAGATAGCTACTTT +
Preference number: 4 (lower is better)
Translates to: KILPSLDVSMKY*FLHPATPDSYF
Trigger: AAAGTAGCTATCTGGAGTCGCGGGATGTAAAAACAAATATTTCATGGAAACGTCTAAAGAAGGTAGGATCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327520.7
CDS-3UTR TCA 90 bp CTGGTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCCATTGGCATTTGAAATaGTGCTATCTTTGCAGTTCA +
Preference number: 4 (lower is better)
Translates to: LVFVSYSHSNCLNVVKNIHWHLK*CYLCSS
Trigger: TGAACTGCAAAGATAGCATCATTTCAAATGCCAATG...GATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACACCAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp CTGGTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCGTTGTTCCTATATCATaGTCTTTAGCAGCAACTACA +
Preference number: 4 (lower is better)
Translates to: LVFVSYSHSNCLNVVKNIVVPIS*SLAATT
Trigger: TGTAGTTGCTGCTAAAGATCATGATATAGGAACAAC...GATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACACCAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp CTTGGCACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATGTTGTTCCTATATCATaGTCTTTAGCAGCAACTACA +
Preference number: 4 (lower is better)
Translates to: LGTDGFMKLKVSVHTYHHVVPIS*SLAATT
Trigger: TGTAGTTGCTGCTAAAGATCATGATATAGGAACAAC...ATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGTGCCAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp ACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATTCAAGGTGTGGTTCTAGTACCTaGTCATTCATAACGATCATG +
Preference number: 4 (lower is better)
Translates to: TDGFMKLKVSVHTYHHSRCGSST*SFITIM
Trigger: CATGATCGTTATGAATGATCAGGTACTAGAACCACA...CCTTGAATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp CTTGGCACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATCTCTGGCTTCTGTTCTaGGGAATTATCTATTATTCT +
Preference number: 4 (lower is better)
Translates to: LGTDGFMKLKVSVHTYHHLWLLF*GIIYYS
Trigger: AGAATAATAGATAATTCCTCAGAACAGAAGCCAGAG...ATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGTGCCAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp CTGGTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCGTACTTGAGTTTTCCTaGGCCACCTTTTCTAAATTA +
Preference number: 4 (lower is better)
Translates to: LVFVSYSHSNCLNVVKNIVLEFS*ATFSKL
Trigger: TAATTTAGAAAAGGTGGCTCAGGAAAACTCAAGTAC...GATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACACCAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp CTGGTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCCAAGTGATCATTTCCTaGAGAAGCATTTGTAACACT +
Preference number: 4 (lower is better)
Translates to: LVFVSYSHSNCLNVVKNIQVIIS*RSICNT
Trigger: AGTGTTACAAATGCTTCTTCAGGAAATGATCACTTG...GATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACACCAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp CTTGGCACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATTTTAACAACTTCAGGTaGTGGGCTGGATTTTATCTT +
Preference number: 4 (lower is better)
Translates to: LGTDGFMKLKVSVHTYHHFNNFR*WAGFYL
Trigger: AAGATAAAATCCAGCCCATCACCTGAAGTTGTTAAA...ATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGTGCCAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp ACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATTCAAGGAGGAAAGGTGAAATATaGTTAGCTCCTGTTTCTGAC +
Preference number: 4 (lower is better)
Translates to: TDGFMKLKVSVHTYHHSRRKGEI*LAPVSD
Trigger: GTCAGAAACAGGAGCTAATCATATTTCACCTTTCCT...CCTTGAATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp GTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCAGTAGGAAAGGTGAAATATaGTTAGCTCCTGTTTCTGAC +
Preference number: 4 (lower is better)
Translates to: VFVSYSHSNCLNVVKNISRKGEI*LAPVSD
Trigger: GTCAGAAACAGGAGCTAATCATATTTCACCTTTCCT...ACTGATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp CTGGTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCAAATGCCTATGTAAGTaGCAATCTTTTCCAGTCTGT +
Preference number: 4 (lower is better)
Translates to: LVFVSYSHSNCLNVVKNIKCLCK*QSFPVC
Trigger: ACAGACTGGAAAAGATTGTCACTTACATAGGCATTT...GATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACACCAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp ACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATTCAAGGACATCAATACTTTCTTaGAGAATTCGACGGTGTTCC +
Preference number: 4 (lower is better)
Translates to: TDGFMKLKVSVHTYHHSRTSILS*RIRRCS
Trigger: GGAACACCGTCGAATTCTTCAAGAAAGTATTGATGT...CCTTGAATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp ACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATTCAAGGTCCTACAATCATTTCTaGAGGTTGTTACTGAGTGAG +
Preference number: 4 (lower is better)
Translates to: TDGFMKLKVSVHTYHHSRSYNHF*RLLLSE
Trigger: CTCACTCAGTAACAACCTTCAGAAATGATTGTAGGA...CCTTGAATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp CTGGTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCCGTCAAACTCTGTTCTaGAGAACTCTTAAAATTTGC +
Preference number: 4 (lower is better)
Translates to: LVFVSYSHSNCLNVVKNIRQTLF*RTLKIC
Trigger: GCAAATTTTAAGAGTTCTTCAGAACAGAGTTTGACG...GATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACACCAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp GTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCAGTCCAATCTTTCAATACTaGACGAGGAATGCCAGTATT +
Preference number: 4 (lower is better)
Translates to: VFVSYSHSNCLNVVKNISPIFQY*TRNASI
Trigger: AATACTGGCATTCCTCGTTCAGTATTGAAAGATTGG...ACTGATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp ACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATTCAAGGTTTGCTTCAGCTTCTTaGCTTTACGCCAATCTTTCA +
Preference number: 4 (lower is better)
Translates to: TDGFMKLKVSVHTYHHSRFASAS*LYANLS
Trigger: TGAAAGATTGGCGTAAAGTCAAGAAGCTGAAGCAAA...CCTTGAATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR GCA 90 bp CTGGTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCTCTTTAGAAGCTAACTaGATTGCTGGCATACTATCA +
Preference number: 4 (lower is better)
Translates to: LVFVSYSHSNCLNVVKNISLEAN*IAGILS
Trigger: TGATAGTATGCCAGCAATGCAGTTAGCTTCTAAAGA...GATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACACCAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR GCA 90 bp ACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATTCAAGGTTTTCCCTAAGAGTGTaGATGGCATCTAGAAGATCT +
Preference number: 4 (lower is better)
Translates to: TDGFMKLKVSVHTYHHSRFSLRV*MASRRS
Trigger: AGATCTTCTAGATGCCATGCACACTCTTAGGGAAAA...CCTTGAATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR GCA 90 bp CTTGGCACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATATGTTCATTTTCTTATaGACACCAGAAACCACTGCA +
Preference number: 4 (lower is better)
Translates to: LGTDGFMKLKVSVHTYHHMFIFL*TPETTA
Trigger: TGCAGTGGTTTCTGGTGTGCATAAGAAAATGAACAT...ATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGTGCCAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR GCA 90 bp GTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCAGTCTGCTTTTGAGAGAATaGCATTTCCTTTTGCTATGC +
Preference number: 4 (lower is better)
Translates to: VFVSYSHSNCLNVVKNISLLLRE*HFLLLC
Trigger: GCATAGCAAAAGGAAATGGCATTCTCTCAAAAGCAG...ACTGATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR GCA 90 bp ACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATTCAAGGCTGCTTTTGAGAGAATaGCATTTCCTTTTGCTATGC +
Preference number: 4 (lower is better)
Translates to: TDGFMKLKVSVHTYHHSRLLLRE*HFLLLC
Trigger: GCATAGCAAAAGGAAATGGCATTCTCTCAAAAGCAG...CCTTGAATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR GCA 90 bp CTGGTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCGATGTTCTGGTATCTTaGCTACTAAACCTTCACTTT +
Preference number: 4 (lower is better)
Translates to: LVFVSYSHSNCLNVVKNIDVLVS*LLNLHF
Trigger: AAAGTGAAGGTTTAGTAGGCAAGATACCAGAACATC...GATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACACCAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR GCA 90 bp CTTGGCACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATAGAACTCTTAAAATTTaGCTGGGAGTCTTTTGGTTC +
Preference number: 4 (lower is better)
Translates to: LGTDGFMKLKVSVHTYHHRTLKI*LGVFWF
Trigger: GAACCAAAAGACTCCCAGGCAAATTTTAAGAGTTCT...ATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGTGCCAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR GCA 90 bp CTGGTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCAGAACTCTTAAAATTTaGCTGGGAGTCTTTTGGTTC +
Preference number: 4 (lower is better)
Translates to: LVFVSYSHSNCLNVVKNIRTLKI*LGVFWF
Trigger: GAACCAAAAGACTCCCAGGCAAATTTTAAGAGTTCT...GATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACACCAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR GCA 90 bp CTGGTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCATACTGAACGAGGAATaGCAGTATTACTGTTGCTTT +
Preference number: 4 (lower is better)
Translates to: LVFVSYSHSNCLNVVKNIILNEE*QYYCCF
Trigger: AAAGCAACAGTAATACTGGCATTCCTCGTTCAGTAT...GATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACACCAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CCA 90 bp ACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATTCAAGGATCTTCGTATCTTGCTaGCATCATAGTCTTGAAGTC +
Preference number: 4 (lower is better)
Translates to: TDGFMKLKVSVHTYHHSRIFVSC*HHSLEV
Trigger: GACTTCAAGACTATGATGCCAGCAAGATACGAAGAT...CCTTGAATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CCA 90 bp GTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCAGTATCTTCGTATCTTGCTaGCATCATAGTCTTGAAGTC +
Preference number: 4 (lower is better)
Translates to: VFVSYSHSNCLNVVKNISIFVSC*HHSLEV
Trigger: GACTTCAAGACTATGATGCCAGCAAGATACGAAGAT...ACTGATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CCA 90 bp GTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCAGTCTTTGTTGCTGTTGCTaGTGTGTATTCTGTTTTGGT +
Preference number: 4 (lower is better)
Translates to: VFVSYSHSNCLNVVKNISLCCCC*CVFCFG
Trigger: ACCAAAACAGAATACACACCAGCAACAGCAACAAAG...ACTGATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CCA 90 bp CTGGTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCTATGATCAGAAACTGTaGACTGTTCTGACGAATGAA +
Preference number: 4 (lower is better)
Translates to: LVFVSYSHSNCLNVVKNIYDQKL*TVLTNE
Trigger: TTCATTCGTCAGAACAGTCCACAGTTTCTGATCATA...GATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACACCAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CCA 90 bp GTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCAGTAGATTTTATAGTCTCTaGAGGTGGACTTCGCTTATG +
Preference number: 4 (lower is better)
Translates to: VFVSYSHSNCLNVVKNISRFYSL*RWTSLM
Trigger: CATAAGCGAAGTCCACCTCCAGAGACTATAAAATCT...ACTGATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CCA 90 bp ACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATTCAAGGCTTCAGGTGATGGGCTaGATTTTATCTTGTGAGTAT +
Preference number: 4 (lower is better)
Translates to: TDGFMKLKVSVHTYHHSRLQVMG*ILSCEY
Trigger: ATACTCACAAGATAAAATCCAGCCCATCACCTGAAG...CCTTGAATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CCA 90 bp GTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCAGTCTTCAGGTGATGGGCTaGATTTTATCTTGTGAGTAT +
Preference number: 4 (lower is better)
Translates to: VFVSYSHSNCLNVVKNISLQVMG*ILSCEY
Trigger: ATACTCACAAGATAAAATCCAGCCCATCACCTGAAG...ACTGATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CCA 90 bp GTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCAGTCCTTCACTTTCTGGTTaGTGTTTAATCAAAGGTGGA +
Preference number: 4 (lower is better)
Translates to: VFVSYSHSNCLNVVKNISPSLSG*CLIKGG
Trigger: TCCACCTTTGATTAAACACCAACCAGAAAGTGAAGG...ACTGATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CCA 90 bp ACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATTCAAGGGAAGAAACTGTCAAATaGGTAGGACTCCTACAATCA +
Preference number: 4 (lower is better)
Translates to: TDGFMKLKVSVHTYHHSREETVK*VGLLQS
Trigger: TGATTGTAGGAGTCCTACCCATTTGACAGTTTCTTC...CCTTGAATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CCA 90 bp GTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCAGTTTTTGTACTAGAAGATaGACGCACAATGACAGATGC +
Preference number: 4 (lower is better)
Translates to: VFVSYSHSNCLNVVKNISFCTRR*THNDRC
Trigger: GCATCTGTCATTGTGCGTCCATCTTCTAGTACAAAA...ACTGATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CCA 90 bp CTTGGCACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATTTCACATACCAACTTTaGTCACGTATTGGATCATGT +
Preference number: 4 (lower is better)
Translates to: LGTDGFMKLKVSVHTYHHFTYQL*SRIGSC
Trigger: ACATGATCCAATACGTGACCAAAGTTGGTATGTGAA...ATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGTGCCAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp GTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCAGTGTTTCCAACATTCTTTaGAAAGCTTCCAATTACTGC +
Preference number: 4 (lower is better)
Translates to: VFVSYSHSNCLNVVKNISVSNIL*KASNYC
Trigger: GCAGTAATTGGAAGCTTTTCAAAGAATGTTGGAAAC...ACTGATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp ACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATTCAAGGTGCATAAAAATCTCCTaGACCTTTTGTTCCTTTACC +
Preference number: 4 (lower is better)
Translates to: TDGFMKLKVSVHTYHHSRCIKIS*TFCSFT
Trigger: GGTAAAGGAACAAAAGGTTCAGGAGATTTTTATGCA...CCTTGAATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399262.7
ENST00000542921.5
CDS-3UTR TCA 90 bp GTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCAGTAACTGTGGACTGTTCTaGCGAATGAATAATCATATC +
Preference number: 4 (lower is better)
Translates to: VFVSYSHSNCLNVVKNISNCGLF*RMNNHI
Trigger: GATATGATTATTCATTCGTCAGAACAGTCCACAGTT...ACTGATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp GTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCAGTCAAGTGATCATTTCCTaGAGAAGCATTTGTAACACT +
Preference number: 4 (lower is better)
Translates to: VFVSYSHSNCLNVVKNISQVIIS*RSICNT
Trigger: AGTGTTACAAATGCTTCTTCAGGAAATGATCACTTG...ACTGATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp GTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCAGTAAATGCCTATGTAAGTaGCAATCTTTTCCAGTCTGT +
Preference number: 4 (lower is better)
Translates to: VFVSYSHSNCLNVVKNISKCLCK*QSFPVC
Trigger: ACAGACTGGAAAAGATTGTCACTTACATAGGCATTT...ACTGATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR TCA 90 bp GTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCAGTCGTCAAACTCTGTTCTaGAGAACTCTTAAAATTTGC +
Preference number: 4 (lower is better)
Translates to: VFVSYSHSNCLNVVKNISRQTLF*RTLKIC
Trigger: GCAAATTTTAAGAGTTCTTCAGAACAGAGTTTGACG...ACTGATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR GCA 90 bp GTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCAGTCCACTCTTGTTTTTCTaGCGTTTTGAAACTTCTTCA +
Preference number: 4 (lower is better)
Translates to: VFVSYSHSNCLNVVKNISPLLFF*RFETSS
Trigger: TGAAGAAGTTTCAAAACGGCAGAAAAACAAGAGTGG...ACTGATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR GCA 90 bp ACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATTCAAGGCCACTCTTGTTTTTCTaGCGTTTTGAAACTTCTTCA +
Preference number: 4 (lower is better)
Translates to: TDGFMKLKVSVHTYHHSRPLLFF*RFETSS
Trigger: TGAAGAAGTTTCAAAACGGCAGAAAAACAAGAGTGG...CCTTGAATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR GCA 90 bp CTGGTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCGAATTGGATGAAAACTaGATCTTGATAGCTCATGTT +
Preference number: 4 (lower is better)
Translates to: LVFVSYSHSNCLNVVKNIELDEN*ILIAHV
Trigger: AACATGAGCTATCAAGATGCAGTTTTCATCCAATTC...GATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACACCAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR GCA 90 bp ACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATTCAAGGAGAACTCTTAAAATTTaGCTGGGAGTCTTTTGGTTC +
Preference number: 4 (lower is better)
Translates to: TDGFMKLKVSVHTYHHSRRTLKI*LGVFWF
Trigger: GAACCAAAAGACTCCCAGGCAAATTTTAAGAGTTCT...CCTTGAATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR GCA 90 bp ACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATTCAAGGTGCCAGTATTACTGTTaGTTTGCAACTTCAGTTTAC +
Preference number: 4 (lower is better)
Translates to: TDGFMKLKVSVHTYHHSRCQYYC*FATSVY
Trigger: GTAAACTGAAGTTGCAAAGCAACAGTAATACTGGCA...CCTTGAATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR GCA 90 bp ACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATTCAAGGATACTGAACGAGGAATaGCAGTATTACTGTTGCTTT +
Preference number: 4 (lower is better)
Translates to: TDGFMKLKVSVHTYHHSRILNEE*QYYCCF
Trigger: AAAGCAACAGTAATACTGGCATTCCTCGTTCAGTAT...CCTTGAATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CCA 90 bp CTGGTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCGAACCAGGTATAATTTaGGTTGGCATTAAATGTTTG +
Preference number: 4 (lower is better)
Translates to: LVFVSYSHSNCLNVVKNIEPGII*VGIKCL
Trigger: CAAACATTTAATGCCAACCCAAATTATACCTGGTTC...GATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACACCAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CCA 90 bp GTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCAGTTATGATCAGAAACTGTaGACTGTTCTGACGAATGAA +
Preference number: 4 (lower is better)
Translates to: VFVSYSHSNCLNVVKNISYDQKL*TVLTNE
Trigger: TTCATTCGTCAGAACAGTCCACAGTTTCTGATCATA...ACTGATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CCA 90 bp ACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATTCAAGGATTAACTGCATTTTCTaGGTGAACCCACTTAGAAGA +
Preference number: 4 (lower is better)
Translates to: TDGFMKLKVSVHTYHHSRINCIF*VNPLRR
Trigger: TCTTCTAAGTGGGTTCACCCAGAAAATGCAGTTAAT...CCTTGAATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CCA 90 bp CTGGTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCTCTTGTTTGATGATATaGCTTTTAGGACTGGAAGAT +
Preference number: 4 (lower is better)
Translates to: LVFVSYSHSNCLNVVKNISCLMI*LLGLED
Trigger: ATCTTCCAGTCCTAAAAGCCATATCATCAAACAAGA...GATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACACCAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CCA 90 bp CTGGTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCTATTTGAAACTTCTTTaGATGGGTATGATCTTGGTG +
Preference number: 4 (lower is better)
Translates to: LVFVSYSHSNCLNVVKNIYLKLL*MGMILV
Trigger: CACCAAGATCATACCCATCCAAAGAAGTTTCAAATA...GATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACACCAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CCA 90 bp GTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCAGTAGATGCAATCTGATGTaGAAGATGTTCTGGTATCTT +
Preference number: 4 (lower is better)
Translates to: VFVSYSHSNCLNVVKNISRCNLM*KMFWYL
Trigger: AAGATACCAGAACATCTTCCACATCAGATTGCATCT...ACTGATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CCA 90 bp GTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCAGTTTCACATACCAACTTTaGTCACGTATTGGATCATGT +
Preference number: 4 (lower is better)
Translates to: VFVSYSHSNCLNVVKNISFTYQL*SRIGSC
Trigger: ACATGATCCAATACGTGACCAAAGTTGGTATGTGAA...ACTGATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CCA 90 bp GTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCAGTAAAATCACAGGCAAATaGCTCTCAAACCAAGCATTT +
Preference number: 4 (lower is better)
Translates to: VFVSYSHSNCLNVVKNISKITGK*LSNQAF
Trigger: AAATGCTTGGTTTGAGAGCCATTTGCCTGTGATTTT...ACTGATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542921.5
CDS-3UTR GCA 90 bp GTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCAGTGAATTGGATGAAAACTaGATCTTGATAGCTCATGTT +
Preference number: 4 (lower is better)
Translates to: VFVSYSHSNCLNVVKNISELDEN*ILIAHV
Trigger: AACATGAGCTATCAAGATGCAGTTTTCATCCAATTC...ACTGATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACAC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CCA 90 bp ACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATTCAAGGTCTTGTTTGATGATATaGCTTTTAGGACTGGAAGAT +
Preference number: 4 (lower is better)
Translates to: TDGFMKLKVSVHTYHHSRSCLMI*LLGLED
Trigger: ATCTTCCAGTCCTAAAAGCCATATCATCAAACAAGA...CCTTGAATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS GCA 90 bp GGAGCTCCCTGCGACGGCCGAGGGCCTAGCTGCGGCGACTGCGGCTaGGACGGCGGCGGCGGCTGTGGCGCTGCTCGGCTGCGTGCGGTG +
Preference number: 5 (lower is better)
Translates to: GAPCDGRGPSCGDCG*DGGGGCGAARLRAV
Trigger: CACCGCACGCAGCCGAGCAGCGCCACAGCCGCCGCCGCCGTCGCAGCCGCAGTCGCCGCAGCTAGGCCCTCGGCCGTCGCAGGGAGCTCC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000633035.1
CDS TCA 90 bp CCGCCAGGTCCGGATTGCGGCTGTCCCTGTGTGACACGGCTCGGATaGCCCCCGCTCGCCAGCTTCGCCAGCCGCGTCCGCTCTCCCAGC +
Preference number: 5 (lower is better)
Translates to: PPGPDCGCPCVTRLG*PPLASFASRVRSPS
Trigger: GCTGGGAGAGCGGACGCGGCTGGCGAAGCTGGCGAGCGGGGGTCATCCGAGCCGTGTCACACAGGGACAGCCGCAATCCGGACCTGGCGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399262.7
CDS GCA 90 bp GCAGCGGACCCGAAAGAGCGCAGACTCGGGACGAACCGGCCGCTCTaGCCCGGACACAGCGACCTCGGGCCCTCCCCGCAAACACTCCTT +
Preference number: 5 (lower is better)
Translates to: AADPKERRLGTNRPL*PGHSDLGPSPQTLL
Trigger: AAGGAGTGTTTGCGGGGAGGGCCCGAGGTCGCTGTGTCCGGGGCAGAGCGGCCGGTTCGTCCCGAGTCTGCGCTCTTTCGGGTCCGCTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399262.7
CDS GCA 90 bp TCGCCAGCTTCGCCAGCCGCGTCCGCTCTCCCAGCGCTCCGAACGTaGCTCGTCGCCGACCGCCACACACAGGAACCGCTTACCCACCAG +
Preference number: 5 (lower is better)
Translates to: SPASPAASALPALRT*LVADRHTQEPLTHQ
Trigger: CTGGTGGGTAAGCGGTTCCTGTGTGTGGCGGTCGGCGACGAGGCACGTTCGGAGCGCTGGGAGAGCGGACGCGGCTGGCGAAGCTGGCGA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399262.7
CDS GCA 90 bp CTCGTCGCCGACCGCCACACACAGGAACCGCTTACCCACCAGCTCTaGCCGCGTCTCTACCGCCATAGCTGTCGCTGCCGAAGCGGCCGC +
Preference number: 5 (lower is better)
Translates to: LVADRHTQEPLTHQL*PRLYRHSCRCRSGR
Trigger: GCGGCCGCTTCGGCAGCGACAGCTATGGCGGTAGAGACGCGGGCAGAGCTGGTGGGTAAGCGGTTCCTGTGTGTGGCGGTCGGCGACGAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399262.7
CDS GCA 90 bp ATCAAATTCCACATACACCTTGGTCCACGTCGCTGCGGAGCTCCCTaGGACGGCCGAGGGCCTAGCTGCGGCGACTGCGGCTGCGACGGC +
Preference number: 5 (lower is better)
Translates to: IKFHIHLGPRRCGAP*DGRGPSCGDCGCDG
Trigger: GCCGTCGCAGCCGCAGTCGCCGCAGCTAGGCCCTCGGCCGTCGCAGGGAGCTCCGCAGCGACGTGGACCAAGGTGTATGTGGAATTTGAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000633035.1
CDS TCA 90 bp AAATTCCACATACACCGCCAGGTCCGGATTGCGGCTGTCCCTGTGTaGCACGGCTCGGATGACCCCCGCTCGCCAGCTTCGCCAGCCGCG +
Preference number: 5 (lower is better)
Translates to: KFHIHRQVRIAAVPV*HGSDDPRSPASPAA
Trigger: CGCGGCTGGCGAAGCTGGCGAGCGGGGGTCATCCGAGCCGTGTCACACAGGGACAGCCGCAATCCGGACCTGGCGGTGTATGTGGAATTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399262.7
CDS GCA 90 bp TGCCCGCGTCTCTACCGCCATAGCTGTCGCTGCCGAAGCGGCCGCTaGCTCCTCCAGTGCGAGGGAACCGATGAAACCTCACTCCTACCG +
Preference number: 5 (lower is better)
Translates to: CPRLYRHSCRCRSGR*LLQCEGTDETSLLP
Trigger: CGGTAGGAGTGAGGTTTCATCGGTTCCCTCGCACTGGAGGAGGCAGCGGCCGCTTCGGCAGCGACAGCTATGGCGGTAGAGACGCGGGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399262.7
CDS CCA 90 bp TGCCCCGGACACAGCGACCTCGGGCCCTCCCCGCAAACACTCCTTTaGACTCCCAGATTCGCAGCCTTGTGCTGCAGCGCCACACAAGAA +
Preference number: 5 (lower is better)
Translates to: CPGHSDLGPSPQTLL*TPRFAALCCSATQE
Trigger: TTCTTGTGTGGCGCTGCAGCACAAGGCTGCGAATCTGGGAGTCCAAAGGAGTGTTTGCGGGGAGGGCCCGAGGTCGCTGTGTCCGGGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399262.7
CDS TCA 90 bp TGTTGTTGCTGGTGTGCTAGCGCTAAGTGGCTCAAGCTGCTGGCATaGGCACTCTCTAGTCGTGGGTGGCCACCAAGTAAGGAGGCAGTA +
Preference number: 5 (lower is better)
Translates to: CCCWCASAKWLKLLA*ALSSRGWPPSKEAV
Trigger: TACTGCCTCCTTACTTGGTGGCCACCCACGACTAGAGAGTGCTCATGCCAGCAGCTTGAGCCACTTAGCGCTAGCACACCAGCAACAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399262.7
ENST00000402544.5
ENST00000542921.5
ENST00000639129.1
CDS CCA 90 bp ACTGTTGTTGTTGCTGGTGTGCTAGCGCTAAGTGGCTCAAGCTGCTaGCATGAGCACTCTCTAGTCGTGGGTGGCCACCAAGTAAGGAGG +
Preference number: 5 (lower is better)
Translates to: TVVVAGVLALSGSSC*HEHSLVVGGHQVRR
Trigger: CCTCCTTACTTGGTGGCCACCCACGACTAGAGAGTGCTCATGCCAGCAGCTTGAGCCACTTAGCGCTAGCACACCAGCAACAACAACAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399262.7
ENST00000402544.5
ENST00000542921.5
ENST00000639129.1
CDS GCA 90 bp ACAACTGTTGTTGTTGCTGGTGTGCTAGCGCTAAGTGGCTCAAGCTaGTGGCATGAGCACTCTCTAGTCGTGGGTGGCCACCAAGTAAGG +
Preference number: 5 (lower is better)
Translates to: TTVVVAGVLALSGSS*WHEHSLVVGGHQVR
Trigger: CCTTACTTGGTGGCCACCCACGACTAGAGAGTGCTCATGCCAGCAGCTTGAGCCACTTAGCGCTAGCACACCAGCAACAACAACAGTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399262.7
ENST00000402544.5
ENST00000542921.5
ENST00000639129.1
CDS GCA 90 bp CAGCCATCCATCAGCTGGAGAAAGCCTTTCCCACTGTACTCTGTCTaGGTGGAAACACAGTGCAGTAGCTTCCAACAGTGCAGACACCCA +
Preference number: 5 (lower is better)
Translates to: QPSISWRKPFPLYSV*VETQCSSFQQCRHP
Trigger: TGGGTGTCTGCACTGTTGGAAGCTACTGCACTGTGTTTCCACGCAGACAGAGTACAGTGGGAAAGGCTTTCTCCAGCTGATGGATGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489372.4
CDS CCA 90 bp CATCCATCAGCTGGAGAAAGCCTTTCCCACTGTACTCTGTCTGCGTaGAAACACAGTGCAGTAGCTTCCAACAGTGCAGACACCCAAATG +
Preference number: 5 (lower is better)
Translates to: HPSAGESLSHCTLSA*KHSAVASNSADTQM
Trigger: CATTTGGGTGTCTGCACTGTTGGAAGCTACTGCACTGTGTTTCCACGCAGACAGAGTACAGTGGGAAAGGCTTTCTCCAGCTGATGGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489372.4
CDS-3UTR CAA 90 bp GACATGACTGCTGTGCGATTCAGCAATTTCCCAGATGCAGGCAATAGCTGGTGTAACAGCGTTGACGTTTaGATTGGCACGAGACCTGCG +
Preference number: 5 (lower is better)
Translates to: DMTAVRFSNFPDAGNSWCNSVDV*IGTRPA
Trigger: CGCAGGTCTCGTGCCAATCAAAACGTCAACGCTGTT...ACACCAGCTATTGCCTGCATCTGGGAAATTGCTGAATCGCACAGCAGTCATGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399262.7
ENST00000639129.1
CDS GCA 90 bp TGGAGAAAGCCTTTCCCACTGTACTCTGTCTGCGTGGAAACACAGTaGAGTAGCTTCCAACAGTGCAGACACCCAAATGAGAACGAGTAC +
Preference number: 5 (lower is better)
Translates to: WRKPFPLYSVCVETQ*SSFQQCRHPNENEY
Trigger: GTACTCGTTCTCATTTGGGTGTCTGCACTGTTGGAAGCTACTGCACTGTGTTTCCACGCAGACAGAGTACAGTGGGAAAGGCTTTCTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489372.4
CDS-3UTR CAA 90 bp GACATGACTGCTGTGCGATTCAGCAATTTCCCAGATGCAGGCAATAGCTGGTGTGGTAGTTTGGTTGACTaGTCTGGGAAGCTTGCCCAT +
Preference number: 5 (lower is better)
Translates to: DMTAVRFSNFPDAGNSWCGSLVD*SGKLAH
Trigger: ATGGGCAAGCTTCCCAGACAAGTCAACCAAACTACC...ACACCAGCTATTGCCTGCATCTGGGAAATTGCTGAATCGCACAGCAGTCATGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399262.7
ENST00000639129.1
CDS-3UTR CAA 90 bp GACATGACTGCTGTGCGATTCAGCAATTTCCCAGATGCAGGCAATAGCTGGTGTCAGCTTGGGAGTTCATaGCTGGTCTGGGACTATTTG +
Preference number: 5 (lower is better)
Translates to: DMTAVRFSNFPDAGNSWCQLGSS*LVWDYL
Trigger: CAAATAGTCCCAGACCAGCAATGAACTCCCAAGCTG...ACACCAGCTATTGCCTGCATCTGGGAAATTGCTGAATCGCACAGCAGTCATGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399262.7
ENST00000639129.1
CDS GCA 90 bp AGTGCAGTGGTGACTGGGATTCTGGAGGAGTTAACTTGTTATCTGTaGCTACATCACTCTCTGGGCTGCTGCCACCATTTTTCTCAGACT +
Preference number: 5 (lower is better)
Translates to: SAVVTGILEELTCYL*LHHSLGCCHHFSQT
Trigger: AGTCTGAGAAAAATGGTGGCAGCAGCCCAGAGAGTGATGTAGGCACAGATAACAAGTTAACTCCTCCAGAATCCCAGTCACCACTGCACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000327520.7
ENST00000399262.7
ENST00000402544.5
ENST00000490669.1
ENST00000497922.1
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp GTGCGATTCAGCAATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTAACAGCGTTGACGTTTaGATTGGCACGAGACCTGCG +
Preference number: 5 (lower is better)
Translates to: VRFSNFPDAGNSWCLCPINSVDV*IGTRPA
Trigger: CGCAGGTCTCGTGCCAATCAAAACGTCAACGCTGTT...AATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATTGCTGAATCGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp GACATGACTGCTGTGCGATTCAGCAATTTCCCAGATGCAGGCAATAGCTGGTGTTCTTTCACCAGTAGCTaGGCTGTTCACATAAGTGGC +
Preference number: 5 (lower is better)
Translates to: DMTAVRFSNFPDAGNSWCSFTSS*AVHISG
Trigger: GCCACTTATGTGAACAGCCAAGCTACTGGTGAAAGA...ACACCAGCTATTGCCTGCATCTGGGAAATTGCTGAATCGCACAGCAGTCATGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399262.7
ENST00000639129.1
CDS-3UTR CAA 90 bp GTGCGATTCAGCAATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTCCAGGCTGTGATGGATaGGTGGGTGAAATACTGGTG +
Preference number: 5 (lower is better)
Translates to: VRFSNFPDAGNSWCLCPIPGCDG*VGEILV
Trigger: CACCAGTATTTCACCCACCAATCCATCACAGCCTGG...AATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATTGCTGAATCGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS GCA 90 bp GAGGAGTTAACTTGTTATCTGTGCCTACATCACTCTCTGGGCTGCTaGCACCATTTTTCTCAGACTTCGGAGGAGTATTTTGCTGCTGAG +
Preference number: 5 (lower is better)
Translates to: EELTCYLCLHHSLGC*HHFSQTSEEYFAAE
Trigger: CTCAGCAGCAAAATACTCCTCCGAAGTCTGAGAAAAATGGTGGCAGCAGCCCAGAGAGTGATGTAGGCACAGATAACAAGTTAACTCCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000327520.7
ENST00000399262.7
ENST00000402544.5
ENST00000490669.1
ENST00000497922.1
ENST00000542921.5
ENST00000639129.1
CDS GCA 90 bp TTTTGGTACAGCAGCTTGGGAGTTCATTGCTGGTCTGGGACTATTTaGTTGGGCACGTGTATAATGGCTGTGAACAGCGTTGACGTTTTG +
Preference number: 5 (lower is better)
Translates to: FWYSSLGVHCWSGTI*LGTCIMAVNSVDVL
Trigger: CAAAACGTCAACGCTGTTCACAGCCATTATACACGTGCCCAAGCAAATAGTCCCAGACCAGCAATGAACTCCCAAGCTGCTGTACCAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399262.7
ENST00000402544.5
ENST00000542921.5
ENST00000639129.1
CDS GCA 90 bp TTGCTGGTGTGTATTCTGTTTTGGTACAGCAGCTTGGGAGTTCATTaGTGGTCTGGGACTATTTGCTTGGGCACGTGTATAATGGCTGTG +
Preference number: 5 (lower is better)
Translates to: LLVCILFWYSSLGVH*WSGTICLGTCIMAV
Trigger: CACAGCCATTATACACGTGCCCAAGCAAATAGTCCCAGACCAGCAATGAACTCCCAAGCTGCTGTACCAAAACAGAATACACACCAGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399262.7
ENST00000402544.5
ENST00000542921.5
ENST00000639129.1
CDS GCA 90 bp CTGGCATCACCGGAGTTAAAGTTGGAGGGGAAAGACTACTATAGCTaGCTTCCTTTCTTTCCAGGCTGTGATGGATTGGTGGGTGAAATA +
Preference number: 5 (lower is better)
Translates to: LASPELKLEGKDYYS*LPFFPGCDGLVGEI
Trigger: TATTTCACCCACCAATCCATCACAGCCTGGAAAGAAAGGAAGGCAGCTATAGTAGTCTTTCCCCTCCAACTTTAACTCCGGTGATGCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399262.7
ENST00000402544.5
ENST00000542921.5
ENST00000639129.1
CDS CCA 90 bp CTGGCTTTTTGCTCTGCAAGATCTGCTAACCAGTGCAGTGGTGACTaGGATTCTGGAGGAGTTAACTTGTTATCTGTGCCTACATCACTC +
Preference number: 5 (lower is better)
Translates to: LAFCSARSANQCSGD*DSGGVNLLSVPTSL
Trigger: GAGTGATGTAGGCACAGATAACAAGTTAACTCCTCCAGAATCCCAGTCACCACTGCACTGGTTAGCAGATCTTGCAGAGCAAAAAGCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000327520.7
ENST00000399262.7
ENST00000402544.5
ENST00000490669.1
ENST00000497922.1
ENST00000542921.5
ENST00000639129.1
CDS CCA 90 bp GTGTATTCTGTTTTGGTACAGCAGCTTGGGAGTTCATTGCTGGTCTaGGACTATTTGCTTGGGCACGTGTATAATGGCTGTGAACAGCGT +
Preference number: 5 (lower is better)
Translates to: VYSVLVQQLGSSLLV*DYLLGHVYNGCEQR
Trigger: ACGCTGTTCACAGCCATTATACACGTGCCCAAGCAAATAGTCCCAGACCAGCAATGAACTCCCAAGCTGCTGTACCAAAACAGAATACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399262.7
ENST00000402544.5
ENST00000542921.5
ENST00000639129.1
CDS CCA 90 bp CTGGTGTGTATTCTGTTTTGGTACAGCAGCTTGGGAGTTCATTGCTaGTCTGGGACTATTTGCTTGGGCACGTGTATAATGGCTGTGAAC +
Preference number: 5 (lower is better)
Translates to: LVCILFWYSSLGVHC*SGTICLGTCIMAVN
Trigger: GTTCACAGCCATTATACACGTGCCCAAGCAAATAGTCCCAGACCAGCAATGAACTCCCAAGCTGCTGTACCAAAACAGAATACACACCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399262.7
ENST00000402544.5
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp GTGCGATTCAGCAATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTGCTGACCTTGCATTCTaGTTTTTGAGCCACTGGCTG +
Preference number: 5 (lower is better)
Translates to: VRFSNFPDAGNSWCLCPIADLAF*FLSHWL
Trigger: CAGCCAGTGGCTCAAAAACAAGAATGCAAGGTCAGC...AATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATTGCTGAATCGCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp GACATGACTGCTGTGCGATTCAGCAATTTCCCAGATGCAGGCAATAGCTGGTGTGTCCTTTGCTCTGACTaGCTTTCACTTTCATCTGAG +
Preference number: 5 (lower is better)
Translates to: DMTAVRFSNFPDAGNSWCVLCSD*LSLSSE
Trigger: CTCAGATGAAAGTGAAAGCAAGTCAGAGCAAAGGAC...ACACCAGCTATTGCCTGCATCTGGGAAATTGCTGAATCGCACAGCAGTCATGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399262.7
ENST00000639129.1
CDS-3UTR CAA 90 bp GTGCGATTCAGCAATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTTACTTGGGGCTCCCATaGAATATACTGGGGCAAAGG +
Preference number: 5 (lower is better)
Translates to: VRFSNFPDAGNSWCLCPIYLGLP*NILGQR
Trigger: CCTTTGCCCCAGTATATTCAATGGGAGCCCCAAGTA...AATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATTGCTGAATCGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp GTGCGATTCAGCAATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTGAAGGCCAAAGGTACTaGAGTTTTCCTGAGCCACCT +
Preference number: 5 (lower is better)
Translates to: VRFSNFPDAGNSWCLCPIEGQRY*SFPEPP
Trigger: AGGTGGCTCAGGAAAACTCAAGTACCTTTGGCCTTC...AATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATTGCTGAATCGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp GACATGACTGCTGTGCGATTCAGCAATTTCCCAGATGCAGGCAATAGCTGGTGTAGATCCAGGTCATTTTaGGCTGATGTGGATGCAACA +
Preference number: 5 (lower is better)
Translates to: DMTAVRFSNFPDAGNSWCRSRSF*ADVDAT
Trigger: TGTTGCATCCACATCAGCCAAAAATGACCTGGATCT...ACACCAGCTATTGCCTGCATCTGGGAAATTGCTGAATCGCACAGCAGTCATGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399262.7
ENST00000639129.1
CDS-3UTR CAA 90 bp GACATGACTGCTGTGCGATTCAGCAATTTCCCAGATGCAGGCAATAGCTGGTGTTTCTTCAAGCAGCCTTaGACGGAGCTTTTTGTTCAC +
Preference number: 5 (lower is better)
Translates to: DMTAVRFSNFPDAGNSWCFFKQP*TELFVH
Trigger: GTGAACAAAAAGCTCCGTCAAAGGCTGCTTGAAGAA...ACACCAGCTATTGCCTGCATCTGGGAAATTGCTGAATCGCACAGCAGTCATGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399262.7
ENST00000639129.1
CDS GCA 90 bp CTGCTATCTGAGCCCTTCCTCTTATTTGGACGGATACTTCTTTGTTaGTGTTGCTGGTGTGTATTCTGTTTTGGTACAGCAGCTTGGGAG +
Preference number: 5 (lower is better)
Translates to: LLSEPFLLFGRILLC*CCWCVFCFGTAAWE
Trigger: CTCCCAAGCTGCTGTACCAAAACAGAATACACACCAGCAACAGCAACAAAGAAGTATCCGTCCAAATAAGAGGAAGGGCTCAGATAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399262.7
ENST00000402544.5
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp GTGCGATTCAGCAATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTGAACCCAGAACTGGGTaGAACAACACTTCCTGTCTT +
Preference number: 5 (lower is better)
Translates to: VRFSNFPDAGNSWCLCPIEPRTG*NNTSCL
Trigger: AAGACAGGAAGTGTTGTTCAACCCAGTTCTGGGTTC...AATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATTGCTGAATCGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp GACATGACTGCTGTGCGATTCAGCAATTTCCCAGATGCAGGCAATAGCTGGTGTGAAATGATGCTATCTTaGCAGTTCAGGAGATCAGCT +
Preference number: 5 (lower is better)
Translates to: DMTAVRFSNFPDAGNSWCEMMLS*QFRRSA
Trigger: AGCTGATCTCCTGAACTGCAAAGATAGCATCATTTC...ACACCAGCTATTGCCTGCATCTGGGAAATTGCTGAATCGCACAGCAGTCATGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399262.7
ENST00000639129.1
CDS-3UTR CAA 90 bp CTTGGCACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATCCCAGATTCGCAGCCTaGTGCTGCAGCGCCACACAA +
Preference number: 5 (lower is better)
Translates to: LGTDGFMKLKVSVHTYHHPRFAA*CCSATQ
Trigger: TTGTGTGGCGCTGCAGCACAAGGCTGCGAATCTGGG...ATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGTGCCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399262.7
CDS-3UTR CAA 90 bp GTGCGATTCAGCAATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTCTGGGTGGCAGAGTCTaGTCTATATACTCTCACTCT +
Preference number: 5 (lower is better)
Translates to: VRFSNFPDAGNSWCLCPILGGRV*SIYSHS
Trigger: AGAGTGAGAGTATATAGACAAGACTCTGCCACCCAG...AATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATTGCTGAATCGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp GTGCGATTCAGCAATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTCTGGTCTGGGACTATTaGCTTGGGCACGTGTATAAT +
Preference number: 5 (lower is better)
Translates to: VRFSNFPDAGNSWCLCPILVWDY*LGHVYN
Trigger: ATTATACACGTGCCCAAGCAAATAGTCCCAGACCAG...AATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATTGCTGAATCGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp GTGCGATTCAGCAATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTTTTTGGTACAGCAGCTaGGGAGTTCATTGCTGGTCT +
Preference number: 5 (lower is better)
Translates to: VRFSNFPDAGNSWCLCPIFWYSS*GVHCWS
Trigger: AGACCAGCAATGAACTCCCAAGCTGCTGTACCAAAA...AATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATTGCTGAATCGCAC
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp GTGCGATTCAGCAATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTTGGACGGATACTTCTTaGTTGCTGTTGCTGGTGTGT +
Preference number: 5 (lower is better)
Translates to: VRFSNFPDAGNSWCLCPIWTDTS*LLLLVC
Trigger: ACACACCAGCAACAGCAACAAAGAAGTATCCGTCCA...AATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATTGCTGAATCGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp GTGCGATTCAGCAATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTTCTTTCACCAGTAGCTaGGCTGTTCACATAAGTGGC +
Preference number: 5 (lower is better)
Translates to: VRFSNFPDAGNSWCLCPISFTSS*AVHISG
Trigger: GCCACTTATGTGAACAGCCAAGCTACTGGTGAAAGA...AATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATTGCTGAATCGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp GTGCGATTCAGCAATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTTTGCCTGGGAGTCTTTaGGTTCGGGTATTAGAGTTG +
Preference number: 5 (lower is better)
Translates to: VRFSNFPDAGNSWCLCPILPGSL*VRVLEL
Trigger: CAACTCTAATACCCGAACCAAAAGACTCCCAGGCAA...AATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATTGCTGAATCGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS TCA 90 bp TTTGTCATCAGCACTGTGGTGTTAACGACTAAGAAATCCTGCAGCTaGAGCACTACTGCATCCTCCGATCTGGGTCAGGATAATTTCTCT +
Preference number: 5 (lower is better)
Translates to: FVISTVVLTTKKSCS*STTASSDLGQDNFS
Trigger: AGAGAAATTATCCTGACCCAGATCGGAGGATGCAGTAGTGCTTCAGCTGCAGGATTTCTTAGTCGTTAACACCACAGTGCTGATGACAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402544.5
ENST00000489372.4
CDS CCA 90 bp GAGCCCTTCCTCTTATTTGGACGGATACTTCTTTGTTGCTGTTGCTaGTGTGTATTCTGTTTTGGTACAGCAGCTTGGGAGTTCATTGCT +
Preference number: 5 (lower is better)
Translates to: EPFLLFGRILLCCCC*CVFCFGTAAWEFIA
Trigger: AGCAATGAACTCCCAAGCTGCTGTACCAAAACAGAATACACACCAGCAACAGCAACAAAGAAGTATCCGTCCAAATAAGAGGAAGGGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399262.7
ENST00000402544.5
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp GTGCGATTCAGCAATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTCCGGCTTCTGCTAGTTaGAGGCAATCTGTTTTATGT +
Preference number: 5 (lower is better)
Translates to: VRFSNFPDAGNSWCLCPIPASAS*RQSVLC
Trigger: ACATAAAACAGATTGCCTCAAACTAGCAGAAGCCGG...AATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATTGCTGAATCGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp ACAGATCAGTCTTTTATTAACAGGGAATGGAGGCACACTACCAACTGGGAACAAGGTAGTTTGGTTGACTaGTCTGGGAAGCTTGCCCAT +
Preference number: 5 (lower is better)
Translates to: TDQSFINREWRHTTNWEQGSLVD*SGKLAH
Trigger: ATGGGCAAGCTTCCCAGACAAGTCAACCAAACTACC...TTGTTCCCAGTTGGTAGTGTGCCTCCATTCCCTGTTAATAAAAGACTGATCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327520.7
CDS-3UTR CAA 90 bp GTGCGATTCAGCAATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTGTCCACTTTTGCTACTaGGGGCTCCCATTGAATATA +
Preference number: 5 (lower is better)
Translates to: VRFSNFPDAGNSWCLCPIVHFCY*GLPLNI
Trigger: TATATTCAATGGGAGCCCCAAGTAGCAAAAGTGGAC...AATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATTGCTGAATCGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp GACATGACTGCTGTGCGATTCAGCAATTTCCCAGATGCAGGCAATAGCTGGTGTACTGTTTCTCCACTCTaGTTTTTCTGCCGTTTTGAA +
Preference number: 5 (lower is better)
Translates to: DMTAVRFSNFPDAGNSWCTVSPL*FFCRFE
Trigger: TTCAAAACGGCAGAAAAACAAGAGTGGAGAAACAGT...ACACCAGCTATTGCCTGCATCTGGGAAATTGCTGAATCGCACAGCAGTCATGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399262.7
ENST00000639129.1
CDS-3UTR CAA 90 bp CTTTTATTAACAGGGAATGGAGGCACACTACCAACTGGGAACAAATCACCATTCGCTGGCATCATAGTCTaGAAGTCTTCTCCTGAAGGC +
Preference number: 5 (lower is better)
Translates to: LLLTGNGGTLPTGNKSPFAGIIV*KSSPEG
Trigger: GCCTTCAGGAGAAGACTTCAAGACTATGATGCCAGC...GAATGGTGATTTGTTCCCAGTTGGTAGTGTGCCTCCATTCCCTGTTAATAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327520.7
CDS-3UTR CAA 90 bp AATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTCTCACAGTAACTCAGCTTGGGAGTTCATaGCTGGTCTGGGACTATTTG +
Preference number: 5 (lower is better)
Translates to: NFPDAGNSWCLCPILTVTQLGSS*LVWDYL
Trigger: CAAATAGTCCCAGACCAGCAATGAACTCCCAAGCTG...AGTTACTGTGAGAATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp GACATGACTGCTGTGCGATTCAGCAATTTCCCAGATGCAGGCAATAGCTGGTGTACTTCTTTGTTGCTGTaGCTGGTGTGTATTCTGTTT +
Preference number: 5 (lower is better)
Translates to: DMTAVRFSNFPDAGNSWCTSLLL*LVCILF
Trigger: AAACAGAATACACACCAGCAACAGCAACAAAGAAGT...ACACCAGCTATTGCCTGCATCTGGGAAATTGCTGAATCGCACAGCAGTCATGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399262.7
ENST00000639129.1
CDS-3UTR CAA 90 bp ATAACATTGAATCACAGGAGCTGTGACATATGCTATACTGCTGTGGTGTCAGTACCAGGCTGTGATGGATaGGTGGGTGAAATACTGGTG +
Preference number: 5 (lower is better)
Translates to: ITLNHRSCDICYTAVVSVPGCDG*VGEILV
Trigger: CACCAGTATTTCACCCACCAATCCATCACAGCCTGG...TACTGACACCACAGCAGTATAGCATATGTCACAGCTCCTGTGATTCAATGTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS TCA 90 bp AGTCTTCAAAAATCACAGGCAAATGGCTCTCAAACCAAGCATTTCTaGGCTCACTTGCAGCGGCGTCATTGTATAGGAAGAAAAGCCAAG +
Preference number: 5 (lower is better)
Translates to: SLQKSQANGSQTKHF*AHLQRRHCIGRKAK
Trigger: CTTGGCTTTTCTTCCTATACAATGACGCCGCTGCAAGTGAGCTCAGAAATGCTTGGTTTGAGAGCCATTTGCCTGTGATTTTTGAAGACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000402544.5
ENST00000489372.4
ENST00000542921.5
CDS GCA 90 bp TCTGAGCCCTTCCTCTTATTTGGACGGATACTTCTTTGTTGCTGTTaGTGGTGTGTATTCTGTTTTGGTACAGCAGCTTGGGAGTTCATT +
Preference number: 5 (lower is better)
Translates to: SEPFLLFGRILLCCC*WCVFCFGTAAWEFI
Trigger: AATGAACTCCCAAGCTGCTGTACCAAAACAGAATACACACCAGCAACAGCAACAAAGAAGTATCCGTCCAAATAAGAGGAAGGGCTCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399262.7
ENST00000402544.5
ENST00000542921.5
ENST00000639129.1
CDS GCA 90 bp ACAGATGCCATAGCAGCCTGTAACTTTCCGCTGCTTTTCTCCACATaGCATTCAGTTTTCTCTTTGCTGAGGTTATTATTAGGTCTCCAC +
Preference number: 5 (lower is better)
Translates to: TDAIAACNFPLLFST*HSVFSLLRLLLGLH
Trigger: GTGGAGACCTAATAATAACCTCAGCAAAGAGAAAACTGAATGGCATGTGGAGAAAAGCAGCGGAAAGTTACAGGCTGCTATGGCATCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399262.7
ENST00000402544.5
ENST00000542921.5
ENST00000639129.1
CDS CCA 90 bp GTTGTAGTCAGCAAATCCCGTAAGGTTGAGCCTTGTTCATTATTCTaGGACACAAGAGGTGATGTTCTGCCATTTGGAGATTCAGAGTTG +
Preference number: 5 (lower is better)
Translates to: VVVSKSRKVEPCSLF*DTRGDVLPFGDSEL
Trigger: CAACTCTGAATCTCCAAATGGCAGAACATCACCTCTTGTGTCCCAGAATAATGAACAAGGCTCAACCTTACGGGATTTGCTGACTACAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327520.7
ENST00000399262.7
ENST00000402544.5
ENST00000497922.1
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp AAGTATCATAGTATCAGATGTGATAGAGTAGAATCATTCCCTAGGTCAGCAGCCGCTGACCTTGCATTCTaGTTTTTGAGCCACTGGCTG +
Preference number: 5 (lower is better)
Translates to: KYHSIRCDRVESFPRSAAADLAF*FLSHWL
Trigger: CAGCCAGTGGCTCAAAAACAAGAATGCAAGGTCAGC...GGCTGCTGACCTAGGGAATGATTCTACTCTATCACATCTGATACTATGATACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327520.7
CDS-3UTR CAA 90 bp ATAACATTGAATCACAGGAGCTGTGACATATGCTATACTGCTGTGGTGTCAGTAGGTAGTTTGGTTGACTaGTCTGGGAAGCTTGCCCAT +
Preference number: 5 (lower is better)
Translates to: ITLNHRSCDICYTAVVSVGSLVD*SGKLAH
Trigger: ATGGGCAAGCTTCCCAGACAAGTCAACCAAACTACC...TACTGACACCACAGCAGTATAGCATATGTCACAGCTCCTGTGATTCAATGTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp GTGCGATTCAGCAATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTGTGATGTTCTGCCATTaGGAGATTCAGAGTTGTCTT +
Preference number: 5 (lower is better)
Translates to: VRFSNFPDAGNSWCLCPIVMFCH*EIQSCL
Trigger: AAGACAACTCTGAATCTCCAAATGGCAGAACATCAC...AATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATTGCTGAATCGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp GTGCGATTCAGCAATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTGCAAATCCCGTAAGGTaGAGCCTTGTTCATTATTCT +
Preference number: 5 (lower is better)
Translates to: VRFSNFPDAGNSWCLCPIANPVR*SLVHYS
Trigger: AGAATAATGAACAAGGCTCAACCTTACGGGATTTGC...AATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATTGCTGAATCGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp ATAGCTACTTTTCGCCACCCAACTAATATCTGGCTCAAGAACAGATCAGTCTTTTACTTGGGGCTCCCATaGAATATACTGGGGCAAAGG +
Preference number: 5 (lower is better)
Translates to: IATFRHPTNIWLKNRSVFYLGLP*NILGQR
Trigger: CCTTTGCCCCAGTATATTCAATGGGAGCCCCAAGTA...AAAGACTGATCTGTTCTTGAGCCAGATATTAGTTGGGTGGCGAAAAGTAGCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000327520.7
CDS-3UTR CAA 90 bp ATAACATTGAATCACAGGAGCTGTGACATATGCTATACTGCTGTGGTGTCAGTATACTTGGGGCTCCCATaGAATATACTGGGGCAAAGG +
Preference number: 5 (lower is better)
Translates to: ITLNHRSCDICYTAVVSVYLGLP*NILGQR
Trigger: CCTTTGCCCCAGTATATTCAATGGGAGCCCCAAGTA...TACTGACACCACAGCAGTATAGCATATGTCACAGCTCCTGTGATTCAATGTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp ATAGCTACTTTTCGCCACCCAACTAATATCTGGCTCAAGAACAGATCAGTCTTTATAGTCCGTCCACTTTaGCTACTTGGGGCTCCCATT +
Preference number: 5 (lower is better)
Translates to: IATFRHPTNIWLKNRSVFIVRPL*LLGAPI
Trigger: AATGGGAGCCCCAAGTAGCAAAAGTGGACGGACTAT...AAAGACTGATCTGTTCTTGAGCCAGATATTAGTTGGGTGGCGAAAAGTAGCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327520.7
CDS-3UTR CAA 90 bp ATAACATTGAATCACAGGAGCTGTGACATATGCTATACTGCTGTGGTGTCAGTAATAGTCCGTCCACTTTaGCTACTTGGGGCTCCCATT +
Preference number: 5 (lower is better)
Translates to: ITLNHRSCDICYTAVVSVIVRPL*LLGAPI
Trigger: AATGGGAGCCCCAAGTAGCAAAAGTGGACGGACTAT...TACTGACACCACAGCAGTATAGCATATGTCACAGCTCCTGTGATTCAATGTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp GTGCGATTCAGCAATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTGAAATGATGCTATCTTaGCAGTTCAGGAGATCAGCT +
Preference number: 5 (lower is better)
Translates to: VRFSNFPDAGNSWCLCPIEMMLS*QFRRSA
Trigger: AGCTGATCTCCTGAACTGCAAAGATAGCATCATTTC...AATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATTGCTGAATCGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp ATAACATTGAATCACAGGAGCTGTGACATATGCTATACTGCTGTGGTGTCAGTAGCTGGCATCATAGTCTaGAAGTCTTCTCCTGAAGGC +
Preference number: 5 (lower is better)
Translates to: ITLNHRSCDICYTAVVSVAGIIV*KSSPEG
Trigger: GCCTTCAGGAGAAGACTTCAAGACTATGATGCCAGC...TACTGACACCACAGCAGTATAGCATATGTCACAGCTCCTGTGATTCAATGTTAT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp GACATGACTGCTGTGCGATTCAGCAATTTCCCAGATGCAGGCAATAGCTGGTGTTCTTCCTCAAATTTCTaGAGAATTCCTGCTTTTGAG +
Preference number: 5 (lower is better)
Translates to: DMTAVRFSNFPDAGNSWCSSSNF*RIPAFE
Trigger: CTCAAAAGCAGGAATTCTCAAGAAATTTGAGGAAGA...ACACCAGCTATTGCCTGCATCTGGGAAATTGCTGAATCGCACAGCAGTCATGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399262.7
ENST00000639129.1
CDS-3UTR CAA 90 bp GTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCAGTCCCGCAAACACTCCTTaGGACTCCCAGATTCGCAGC +
Preference number: 5 (lower is better)
Translates to: VFVSYSHSNCLNVVKNISPANTP*DSQIRS
Trigger: GCTGCGAATCTGGGAGTCCAAAGGAGTGTTTGCGGG...ACTGATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399262.7
CDS-3UTR CAA 90 bp ATAACATTGAATCACAGGAGCTGTGACATATGCTATACTGCTGTGGTGTCAGTACAGCTTGGGAGTTCATaGCTGGTCTGGGACTATTTG +
Preference number: 5 (lower is better)
Translates to: ITLNHRSCDICYTAVVSVQLGSS*LVWDYL
Trigger: CAAATAGTCCCAGACCAGCAATGAACTCCCAAGCTG...TACTGACACCACAGCAGTATAGCATATGTCACAGCTCCTGTGATTCAATGTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp AATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTCTCACAGTAACTTTTTGGTACAGCAGCTaGGGAGTTCATTGCTGGTCT +
Preference number: 5 (lower is better)
Translates to: NFPDAGNSWCLCPILTVTFWYSS*GVHCWS
Trigger: AGACCAGCAATGAACTCCCAAGCTGCTGTACCAAAA...AGTTACTGTGAGAATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp GACATGACTGCTGTGCGATTCAGCAATTTCCCAGATGCAGGCAATAGCTGGTGTAACATCAATACTTTCTaGAAGAATTCGACGGTGTTC +
Preference number: 5 (lower is better)
Translates to: DMTAVRFSNFPDAGNSWCNINTF*KNSTVF
Trigger: GAACACCGTCGAATTCTTCAAGAAAGTATTGATGTT...ACACCAGCTATTGCCTGCATCTGGGAAATTGCTGAATCGCACAGCAGTCATGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399262.7
ENST00000639129.1
CDS-3UTR CAA 90 bp GTGCGATTCAGCAATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTTCACCCTCAAGTCCCTaGATTTTAGTTGTAAAGGGA +
Preference number: 5 (lower is better)
Translates to: VRFSNFPDAGNSWCLCPISPSSP*ILVVKG
Trigger: TCCCTTTACAACTAAAATCAAGGGACTTGAGGGTGA...AATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATTGCTGAATCGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS TCA 90 bp GAGTCTTTTGGTTCGGGTATTAGAGTTGGAGGCTTCTGTGATTCTTaGACTTTACCACCAGCATTTACTGGCATCACCGGAGTTAAAGTT +
Preference number: 5 (lower is better)
Translates to: ESFGSGIRVGGFCDS*TLPPAFTGITGVKV
Trigger: AACTTTAACTCCGGTGATGCCAGTAAATGCTGGTGGTAAAGTTCAAGAATCACAGAAGCCTCCAACTCTAATACCCGAACCAAAAGACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399262.7
ENST00000402544.5
ENST00000542921.5
ENST00000639129.1
CDS CCA 90 bp CACATCTCCGTCAAACTCTGTTCTGAAGAACTCTTAAAATTTGCCTaGGAGTCTTTTGGTTCGGGTATTAGAGTTGGAGGCTTCTGTGAT +
Preference number: 5 (lower is better)
Translates to: HISVKLCSEELLKFA*ESFGSGIRVGGFCD
Trigger: ATCACAGAAGCCTCCAACTCTAATACCCGAACCAAAAGACTCCCAGGCAAATTTTAAGAGTTCTTCAGAACAGAGTTTGACGGAGATGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399262.7
ENST00000402544.5
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp ATAGCTACTTTTCGCCACCCAACTAATATCTGGCTCAAGAACAGATCAGTCTTTCTTGCATTCTTGTTTTaGAGCCACTGGCTGACTGAC +
Preference number: 5 (lower is better)
Translates to: IATFRHPTNIWLKNRSVFLAFLF*SHWLTD
Trigger: GTCAGTCAGCCAGTGGCTCAAAAACAAGAATGCAAG...AAAGACTGATCTGTTCTTGAGCCAGATATTAGTTGGGTGGCGAAAAGTAGCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327520.7
CDS-3UTR CAA 90 bp AAGTATCATAGTATCAGATGTGATAGAGTAGAATCATTCCCTAGGTCAGCAGCCGAACCCAGAACTGGGTaGAACAACACTTCCTGTCTT +
Preference number: 5 (lower is better)
Translates to: KYHSIRCDRVESFPRSAAEPRTG*NNTSCL
Trigger: AAGACAGGAAGTGTTGTTCAACCCAGTTCTGGGTTC...GGCTGCTGACCTAGGGAATGATTCTACTCTATCACATCTGATACTATGATACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327520.7
CDS-3UTR CAA 90 bp TTTATTAACAGGGAATGGAGGCACACTACCAACTGGGAACAAATCACCATTCAAACTTGTCTGGGAAGCTaGCCCATTTCCTACAGAGTT +
Preference number: 5 (lower is better)
Translates to: FINREWRHTTNWEQITIQTCLGS*PISYRV
Trigger: AACTCTGTAGGAAATGGGCAAGCTTCCCAGACAAGT...TTGAATGGTGATTTGTTCCCAGTTGGTAGTGTGCCTCCATTCCCTGTTAATAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327520.7
CDS-3UTR CAA 90 bp ATAACATTGAATCACAGGAGCTGTGACATATGCTATACTGCTGTGGTGTCAGTAACTTGTCTGGGAAGCTaGCCCATTTCCTACAGAGTT +
Preference number: 5 (lower is better)
Translates to: ITLNHRSCDICYTAVVSVTCLGS*PISYRV
Trigger: AACTCTGTAGGAAATGGGCAAGCTTCCCAGACAAGT...TACTGACACCACAGCAGTATAGCATATGTCACAGCTCCTGTGATTCAATGTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp CTTTTATTAACAGGGAATGGAGGCACACTACCAACTGGGAACAAATCACCATTCCACTGCAGGCTGTCCTaGTTTCCAACATTCTTTGAA +
Preference number: 5 (lower is better)
Translates to: LLLTGNGGTLPTGNKSPFHCRLS*FPTFFE
Trigger: TTCAAAGAATGTTGGAAACAAGGACAGCCTGCAGTG...GAATGGTGATTTGTTCCCAGTTGGTAGTGTGCCTCCATTCCCTGTTAATAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327520.7
CDS-3UTR CAA 90 bp AATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTCTCACAGTAACTCACTGCAGGCTGTCCTaGTTTCCAACATTCTTTGAA +
Preference number: 5 (lower is better)
Translates to: NFPDAGNSWCLCPILTVTHCRLS*FPTFFE
Trigger: TTCAAAGAATGTTGGAAACAAGGACAGCCTGCAGTG...AGTTACTGTGAGAATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp TTTATTAACAGGGAATGGAGGCACACTACCAACTGGGAACAAATCACCATTCAAGTTCAGGAGATCAGCTaGGTGGTCTCCAAAATCAAG +
Preference number: 5 (lower is better)
Translates to: FINREWRHTTNWEQITIQVQEIS*VVSKIK
Trigger: CTTGATTTTGGAGACCACCAAGCTGATCTCCTGAAC...TTGAATGGTGATTTGTTCCCAGTTGGTAGTGTGCCTCCATTCCCTGTTAATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327520.7
CDS-3UTR CAA 90 bp ATAACATTGAATCACAGGAGCTGTGACATATGCTATACTGCTGTGGTGTCAGTACTGGGTGGCAGAGTCTaGTCTATATACTCTCACTCT +
Preference number: 5 (lower is better)
Translates to: ITLNHRSCDICYTAVVSVLGGRV*SIYSHS
Trigger: AGAGTGAGAGTATATAGACAAGACTCTGCCACCCAG...TACTGACACCACAGCAGTATAGCATATGTCACAGCTCCTGTGATTCAATGTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp ATAACATTGAATCACAGGAGCTGTGACATATGCTATACTGCTGTGGTGTCAGTATCTTTCACCAGTAGCTaGGCTGTTCACATAAGTGGC +
Preference number: 5 (lower is better)
Translates to: ITLNHRSCDICYTAVVSVSFTSS*AVHISG
Trigger: GCCACTTATGTGAACAGCCAAGCTACTGGTGAAAGA...TACTGACACCACAGCAGTATAGCATATGTCACAGCTCCTGTGATTCAATGTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp AATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTCTCACAGTAACTTCACCGGAGTTAAAGTaGGAGGGGAAAGACTACTAT +
Preference number: 5 (lower is better)
Translates to: NFPDAGNSWCLCPILTVTSPELK*EGKDYY
Trigger: ATAGTAGTCTTTCCCCTCCAACTTTAACTCCGGTGA...AGTTACTGTGAGAATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp GTGCGATTCAGCAATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTAACTTTGGTCACGTATaGGATCATGTTCTGGTAGAA +
Preference number: 5 (lower is better)
Translates to: VRFSNFPDAGNSWCLCPINFGHV*DHVLVE
Trigger: TTCTACCAGAACATGATCCAATACGTGACCAAAGTT...AATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATTGCTGAATCGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS TCA 90 bp GAATTCCTCCTTAATGAAGCTTCAGCATTAACTGCATTTTCTGGGTaGACCCACTTAGAAGAAGGCAAACCAAGTCCTGAGTATGCATGT +
Preference number: 5 (lower is better)
Translates to: EFLLNEASALTAFSG*THLEEGKPSPEYAC
Trigger: ACATGCATACTCAGGACTTGGTTTGCCTTCTTCTAAGTGGGTTCACCCAGAAAATGCAGTTAATGCTGAAGCTTCATTAAGGAGGAATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399262.7
ENST00000402544.5
ENST00000542921.5
ENST00000639129.1
CDS TCA 90 bp TGTCAAATGGGTAGGACTCCTACAATCATTTCTGAAGGTTGTTACTaGGTGAGATGCAATCTGATGTGGAAGATGTTCTGGTATCTTGCC +
Preference number: 5 (lower is better)
Translates to: CQMGRTPTIISEGCY*VRCNLMWKMFWYLA
Trigger: GGCAAGATACCAGAACATCTTCCACATCAGATTGCATCTCACTCAGTAACAACCTTCAGAAATGATTGTAGGAGTCCTACCCATTTGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399262.7
ENST00000402544.5
ENST00000542921.5
ENST00000639129.1
CDS TCA 90 bp GCTGAGGTTATTATTAGGTCTCCACATCTCCGTCAAACTCTGTTCTaGAGAACTCTTAAAATTTGCCTGGGAGTCTTTTGGTTCGGGTAT +
Preference number: 5 (lower is better)
Translates to: AEVIIRSPHLRQTLF*RTLKICLGVFWFGY
Trigger: ATACCCGAACCAAAAGACTCCCAGGCAAATTTTAAGAGTTCTTCAGAACAGAGTTTGACGGAGATGTGGAGACCTAATAATAACCTCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399262.7
ENST00000402544.5
ENST00000542921.5
ENST00000639129.1
CDS CCA 90 bp GCATTTGAAATGATGCTATCTTTGCAGTTCAGGAGATCAGCTTGGTaGTCTCCAAAATCAAGACTAATTGATTCCGCCTTCCATAGGCTA +
Preference number: 5 (lower is better)
Translates to: AFEMMLSLQFRRSAW*SPKSRLIDSAFHRL
Trigger: TAGCCTATGGAAGGCGGAATCAATTAGTCTTGATTTTGGAGACCACCAAGCTGATCTCCTGAACTGCAAAGATAGCATCATTTCAAATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327520.7
ENST00000399262.7
ENST00000402544.5
ENST00000542921.5
ENST00000639129.1
CDS CCA 90 bp TTGGCATTTGAAATGATGCTATCTTTGCAGTTCAGGAGATCAGCTTaGTGGTCTCCAAAATCAAGACTAATTGATTCCGCCTTCCATAGG +
Preference number: 5 (lower is better)
Translates to: LAFEMMLSLQFRRSA*WSPKSRLIDSAFHR
Trigger: CCTATGGAAGGCGGAATCAATTAGTCTTGATTTTGGAGACCACCAAGCTGATCTCCTGAACTGCAAAGATAGCATCATTTCAAATGCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327520.7
ENST00000399262.7
ENST00000402544.5
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp AAGTATCATAGTATCAGATGTGATAGAGTAGAATCATTCCCTAGGTCAGCAGCCCCGGCTTCTGCTAGTTaGAGGCAATCTGTTTTATGT +
Preference number: 5 (lower is better)
Translates to: KYHSIRCDRVESFPRSAAPASAS*RQSVLC
Trigger: ACATAAAACAGATTGCCTCAAACTAGCAGAAGCCGG...GGCTGCTGACCTAGGGAATGATTCTACTCTATCACATCTGATACTATGATACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327520.7
CDS-3UTR CAA 90 bp TTTATTAACAGGGAATGGAGGCACACTACCAACTGGGAACAAATCACCATTCAAAGTATGGTAGTTTGGTaGACTTGTCTGGGAAGCTTG +
Preference number: 5 (lower is better)
Translates to: FINREWRHTTNWEQITIQSMVVW*TCLGSL
Trigger: CAAGCTTCCCAGACAAGTCAACCAAACTACCATACT...TTGAATGGTGATTTGTTCCCAGTTGGTAGTGTGCCTCCATTCCCTGTTAATAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327520.7
CDS-3UTR CAA 90 bp TTTATTAACAGGGAATGGAGGCACACTACCAACTGGGAACAAATCACCATTCAAGTCCTTTGCTCTGACTaGCTTTCACTTTCATCTGAG +
Preference number: 5 (lower is better)
Translates to: FINREWRHTTNWEQITIQVLCSD*LSLSSE
Trigger: CTCAGATGAAAGTGAAAGCAAGTCAGAGCAAAGGAC...TTGAATGGTGATTTGTTCCCAGTTGGTAGTGTGCCTCCATTCCCTGTTAATAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327520.7
CDS-3UTR CAA 90 bp ACAGATCAGTCTTTTATTAACAGGGAATGGAGGCACACTACCAACTGGGAACAAGTAAGTTGGCTTAGGTaGTCTTTTAGTCCTTTGCTC +
Preference number: 5 (lower is better)
Translates to: TDQSFINREWRHTTNWEQVSWLR*SFSPLL
Trigger: GAGCAAAGGACTAAAAGACAACCTAAGCCAACTTAC...TTGTTCCCAGTTGGTAGTGTGCCTCCATTCCCTGTTAATAAAAGACTGATCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327520.7
CDS-3UTR CAA 90 bp ACAGATCAGTCTTTTATTAACAGGGAATGGAGGCACACTACCAACTGGGAACAACTGCTGAGAACTCCATaGGGTTTCAAATCTTCTTCT +
Preference number: 5 (lower is better)
Translates to: TDQSFINREWRHTTNWEQLLRTP*GFKSSS
Trigger: AGAAGAAGATTTGAAACCCAATGGAGTTCTCAGCAG...TTGTTCCCAGTTGGTAGTGTGCCTCCATTCCCTGTTAATAAAAGACTGATCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327520.7
CDS-3UTR CAA 90 bp AATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTCTCACAGTAACTCTGCTGAGAACTCCATaGGGTTTCAAATCTTCTTCT +
Preference number: 5 (lower is better)
Translates to: NFPDAGNSWCLCPILTVTLLRTP*GFKSSS
Trigger: AGAAGAAGATTTGAAACCCAATGGAGTTCTCAGCAG...AGTTACTGTGAGAATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp ACAGATCAGTCTTTTATTAACAGGGAATGGAGGCACACTACCAACTGGGAACAATCTGGAGGAGTTAACTaGTTATCTGTGCCTACATCA +
Preference number: 5 (lower is better)
Translates to: TDQSFINREWRHTTNWEQSGGVN*LSVPTS
Trigger: TGATGTAGGCACAGATAACAAGTTAACTCCTCCAGA...TTGTTCCCAGTTGGTAGTGTGCCTCCATTCCCTGTTAATAAAAGACTGATCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327520.7
CDS-3UTR CAA 90 bp AATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTCTCACAGTAACTTCTGGAGGAGTTAACTaGTTATCTGTGCCTACATCA +
Preference number: 5 (lower is better)
Translates to: NFPDAGNSWCLCPILTVTSGGVN*LSVPTS
Trigger: TGATGTAGGCACAGATAACAAGTTAACTCCTCCAGA...AGTTACTGTGAGAATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp CTTTTATTAACAGGGAATGGAGGCACACTACCAACTGGGAACAAATCACCATTCGCAAATCCCGTAAGGTaGAGCCTTGTTCATTATTCT +
Preference number: 5 (lower is better)
Translates to: LLLTGNGGTLPTGNKSPFANPVR*SLVHYS
Trigger: AGAATAATGAACAAGGCTCAACCTTACGGGATTTGC...GAATGGTGATTTGTTCCCAGTTGGTAGTGTGCCTCCATTCCCTGTTAATAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327520.7
CDS-3UTR CAA 90 bp ATAGCTACTTTTCGCCACCCAACTAATATCTGGCTCAAGAACAGATCAGTCTTTGTCCACTTTTGCTACTaGGGGCTCCCATTGAATATA +
Preference number: 5 (lower is better)
Translates to: IATFRHPTNIWLKNRSVFVHFCY*GLPLNI
Trigger: TATATTCAATGGGAGCCCCAAGTAGCAAAAGTGGAC...AAAGACTGATCTGTTCTTGAGCCAGATATTAGTTGGGTGGCGAAAAGTAGCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327520.7
CDS-3UTR CAA 90 bp CTTGGCACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATATAGTCCGTCCACTTTaGCTACTTGGGGCTCCCATT +
Preference number: 5 (lower is better)
Translates to: LGTDGFMKLKVSVHTYHHIVRPL*LLGAPI
Trigger: AATGGGAGCCCCAAGTAGCAAAAGTGGACGGACTAT...ATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGTGCCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp ATAACATTGAATCACAGGAGCTGTGACATATGCTATACTGCTGTGGTGTCAGTACACTGCAGGCTGTCCTaGTTTCCAACATTCTTTGAA +
Preference number: 5 (lower is better)
Translates to: ITLNHRSCDICYTAVVSVHCRLS*FPTFFE
Trigger: TTCAAAGAATGTTGGAAACAAGGACAGCCTGCAGTG...TACTGACACCACAGCAGTATAGCATATGTCACAGCTCCTGTGATTCAATGTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp CTGGTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCGCTGGCATCATAGTCTaGAAGTCTTCTCCTGAAGGC +
Preference number: 5 (lower is better)
Translates to: LVFVSYSHSNCLNVVKNIAGIIV*KSSPEG
Trigger: GCCTTCAGGAGAAGACTTCAAGACTATGATGCCAGC...GATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACACCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp GTGCGATTCAGCAATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTTCTTCCTCAAATTTCTaGAGAATTCCTGCTTTTGAG +
Preference number: 5 (lower is better)
Translates to: VRFSNFPDAGNSWCLCPISSSNF*RIPAFE
Trigger: CTCAAAAGCAGGAATTCTCAAGAAATTTGAGGAAGA...AATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATTGCTGAATCGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp AATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTCTCACAGTAACTACGGATACTTCTTTGTaGCTGTTGCTGGTGTGTATT +
Preference number: 5 (lower is better)
Translates to: NFPDAGNSWCLCPILTVTTDTSL*LLLVCI
Trigger: AATACACACCAGCAACAGCAACAAAGAAGTATCCGT...AGTTACTGTGAGAATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp GTGCGATTCAGCAATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTGAAAAGTCTGAAACATaGTCAGTTCGAAGTCTTTTC +
Preference number: 5 (lower is better)
Translates to: VRFSNFPDAGNSWCLCPIEKSET*SVRSLF
Trigger: GAAAAGACTTCGAACTGACAATGTTTCAGACTTTTC...AATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATTGCTGAATCGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp GTGCGATTCAGCAATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTATACAAACTTCTCCTTaGGTAGCAATTCCATGGTAT +
Preference number: 5 (lower is better)
Translates to: VRFSNFPDAGNSWCLCPIIQTSP*VAIPWY
Trigger: ATACCATGGAATTGCTACCAAAGGAGAAGTTTGTAT...AATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATTGCTGAATCGCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp CTGGTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCGAAGGCCAAAGGTACTaGAGTTTTCCTGAGCCACCT +
Preference number: 5 (lower is better)
Translates to: LVFVSYSHSNCLNVVKNIEGQRY*SFPEPP
Trigger: AGGTGGCTCAGGAAAACTCAAGTACCTTTGGCCTTC...GATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACACCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp ACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATTCAAGGCCAGGCTGTGATGGATaGGTGGGTGAAATACTGGTG +
Preference number: 5 (lower is better)
Translates to: TDGFMKLKVSVHTYHHSRPGCDG*VGEILV
Trigger: CACCAGTATTTCACCCACCAATCCATCACAGCCTGG...CCTTGAATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp GTGCGATTCAGCAATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTATGCCAGTATTACTGTaGCTTTGCAACTTCAGTTTA +
Preference number: 5 (lower is better)
Translates to: VRFSNFPDAGNSWCLCPIMPVLL*LCNFSL
Trigger: TAAACTGAAGTTGCAAAGCAACAGTAATACTGGCAT...AATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATTGCTGAATCGCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp AATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTCTCACAGTAACTGTTCACATACCAACTTaGGTCACGTATTGGATCATG +
Preference number: 5 (lower is better)
Translates to: NFPDAGNSWCLCPILTVTVHIPT*VTYWIM
Trigger: CATGATCCAATACGTGACCAAAGTTGGTATGTGAAC...AGTTACTGTGAGAATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp ATAACATTGAATCACAGGAGCTGTGACATATGCTATACTGCTGTGGTGTCAGTAGGCAATAGCTGGTGTTaGTGTCCTATTCTCACAGTA +
Preference number: 5 (lower is better)
Translates to: ITLNHRSCDICYTAVVSVGNSWC*CPILTV
Trigger: TACTGTGAGAATAGGACACAAACACCAGCTATTGCC...TACTGACACCACAGCAGTATAGCATATGTCACAGCTCCTGTGATTCAATGTTAT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp ATAACATTGAATCACAGGAGCTGTGACATATGCTATACTGCTGTGGTGTCAGTAATTACAACTCGCTCTTaGTCATCAGCACTGTGGTGT +
Preference number: 5 (lower is better)
Translates to: ITLNHRSCDICYTAVVSVITTRS*SSALWC
Trigger: ACACCACAGTGCTGATGACAAAGAGCGAGTTGTAAT...TACTGACACCACAGCAGTATAGCATATGTCACAGCTCCTGTGATTCAATGTTAT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542921.5
CDS TCA 90 bp TTTAAATGGATAAAATCAGTTGTGCCTGAGAACCCAGAACTGGGTTaGACAACACTTCCTGTCTTACTACTGGCTAATGTAACTGGTGCT +
Preference number: 5 (lower is better)
Translates to: FKWIKSVVPENPELG*TTLPVLLLANVTGA
Trigger: AGCACCAGTTACATTAGCCAGTAGTAAGACAGGAAGTGTTGTTCAACCCAGTTCTGGGTTCTCAGGCACAACTGATTTTATCCATTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327520.7
ENST00000399262.7
ENST00000402544.5
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp GTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCAGTGCTGACCTTGCATTCTaGTTTTTGAGCCACTGGCTG +
Preference number: 5 (lower is better)
Translates to: VFVSYSHSNCLNVVKNISADLAF*FLSHWL
Trigger: CAGCCAGTGGCTCAAAAACAAGAATGCAAGGTCAGC...ACTGATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp CTGGTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCGAACCCAGAACTGGGTaGAACAACACTTCCTGTCTT +
Preference number: 5 (lower is better)
Translates to: LVFVSYSHSNCLNVVKNIEPRTG*NNTSCL
Trigger: AAGACAGGAAGTGTTGTTCAACCCAGTTCTGGGTTC...GATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACACCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp CTTGGCACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATACTTGTCTGGGAAGCTaGCCCATTTCCTACAGAGTT +
Preference number: 5 (lower is better)
Translates to: LGTDGFMKLKVSVHTYHHTCLGS*PISYRV
Trigger: AACTCTGTAGGAAATGGGCAAGCTTCCCAGACAAGT...ATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGTGCCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp ATAACATTGAATCACAGGAGCTGTGACATATGCTATACTGCTGTGGTGTCAGTAGTAAGTTGGCTTAGGTaGTCTTTTAGTCCTTTGCTC +
Preference number: 5 (lower is better)
Translates to: ITLNHRSCDICYTAVVSVVSWLR*SFSPLL
Trigger: GAGCAAAGGACTAAAAGACAACCTAAGCCAACTTAC...TACTGACACCACAGCAGTATAGCATATGTCACAGCTCCTGTGATTCAATGTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp ATAACATTGAATCACAGGAGCTGTGACATATGCTATACTGCTGTGGTGTCAGTACTGCTGAGAACTCCATaGGGTTTCAAATCTTCTTCT +
Preference number: 5 (lower is better)
Translates to: ITLNHRSCDICYTAVVSVLLRTP*GFKSSS
Trigger: AGAAGAAGATTTGAAACCCAATGGAGTTCTCAGCAG...TACTGACACCACAGCAGTATAGCATATGTCACAGCTCCTGTGATTCAATGTTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp CTTTTATTAACAGGGAATGGAGGCACACTACCAACTGGGAACAAATCACCATTCCTTTTCCAGGCAATTTaGGTATTACTGTTGCTTTGC +
Preference number: 5 (lower is better)
Translates to: LLLTGNGGTLPTGNKSPFLFQAI*VLLLLC
Trigger: GCAAAGCAACAGTAATACCAAAATTGCCTGGAAAAG...GAATGGTGATTTGTTCCCAGTTGGTAGTGTGCCTCCATTCCCTGTTAATAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327520.7
CDS-3UTR CAA 90 bp ATAACATTGAATCACAGGAGCTGTGACATATGCTATACTGCTGTGGTGTCAGTATCTGGAGGAGTTAACTaGTTATCTGTGCCTACATCA +
Preference number: 5 (lower is better)
Translates to: ITLNHRSCDICYTAVVSVSGGVN*LSVPTS
Trigger: TGATGTAGGCACAGATAACAAGTTAACTCCTCCAGA...TACTGACACCACAGCAGTATAGCATATGTCACAGCTCCTGTGATTCAATGTTAT
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp AAGTATCATAGTATCAGATGTGATAGAGTAGAATCATTCCCTAGGTCAGCAGCCGTGATGTTCTGCCATTaGGAGATTCAGAGTTGTCTT +
Preference number: 5 (lower is better)
Translates to: KYHSIRCDRVESFPRSAAVMFCH*EIQSCL
Trigger: AAGACAACTCTGAATCTCCAAATGGCAGAACATCAC...GGCTGCTGACCTAGGGAATGATTCTACTCTATCACATCTGATACTATGATACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327520.7
CDS-3UTR CAA 90 bp ATAACATTGAATCACAGGAGCTGTGACATATGCTATACTGCTGTGGTGTCAGTAGCAAATCCCGTAAGGTaGAGCCTTGTTCATTATTCT +
Preference number: 5 (lower is better)
Translates to: ITLNHRSCDICYTAVVSVANPVR*SLVHYS
Trigger: AGAATAATGAACAAGGCTCAACCTTACGGGATTTGC...TACTGACACCACAGCAGTATAGCATATGTCACAGCTCCTGTGATTCAATGTTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp ACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATTCAAGGTACTTGGGGCTCCCATaGAATATACTGGGGCAAAGG +
Preference number: 5 (lower is better)
Translates to: TDGFMKLKVSVHTYHHSRYLGLP*NILGQR
Trigger: CCTTTGCCCCAGTATATTCAATGGGAGCCCCAAGTA...CCTTGAATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp ACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATTCAAGGATAGTCCGTCCACTTTaGCTACTTGGGGCTCCCATT +
Preference number: 5 (lower is better)
Translates to: TDGFMKLKVSVHTYHHSRIVRPL*LLGAPI
Trigger: AATGGGAGCCCCAAGTAGCAAAAGTGGACGGACTAT...CCTTGAATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp CTGGTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCGTTCAGGAGATCAGCTaGGTGGTCTCCAAAATCAAG +
Preference number: 5 (lower is better)
Translates to: LVFVSYSHSNCLNVVKNIVQEIS*VVSKIK
Trigger: CTTGATTTTGGAGACCACCAAGCTGATCTCCTGAAC...GATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACACCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp AAGTATCATAGTATCAGATGTGATAGAGTAGAATCATTCCCTAGGTCAGCAGCCGAAATGATGCTATCTTaGCAGTTCAGGAGATCAGCT +
Preference number: 5 (lower is better)
Translates to: KYHSIRCDRVESFPRSAAEMMLS*QFRRSA
Trigger: AGCTGATCTCCTGAACTGCAAAGATAGCATCATTTC...GGCTGCTGACCTAGGGAATGATTCTACTCTATCACATCTGATACTATGATACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327520.7
CDS-3UTR CAA 90 bp ACAGATCAGTCTTTTATTAACAGGGAATGGAGGCACACTACCAACTGGGAACAAACTGTTTCTCCACTCTaGTTTTTCTGCCGTTTTGAA +
Preference number: 5 (lower is better)
Translates to: TDQSFINREWRHTTNWEQTVSPL*FFCRFE
Trigger: TTCAAAACGGCAGAAAAACAAGAGTGGAGAAACAGT...TTGTTCCCAGTTGGTAGTGTGCCTCCATTCCCTGTTAATAAAAGACTGATCTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327520.7
CDS-3UTR CAA 90 bp GTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCAGTGCTGGCATCATAGTCTaGAAGTCTTCTCCTGAAGGC +
Preference number: 5 (lower is better)
Translates to: VFVSYSHSNCLNVVKNISAGIIV*KSSPEG
Trigger: GCCTTCAGGAGAAGACTTCAAGACTATGATGCCAGC...ACTGATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp CTGGTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCTCTGGGACTATTTGCTaGGGCACGTGTATAATGGCT +
Preference number: 5 (lower is better)
Translates to: LVFVSYSHSNCLNVVKNISGTIC*GTCIMA
Trigger: AGCCATTATACACGTGCCCAAGCAAATAGTCCCAGA...GATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACACCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp CTTGGCACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATTCTGGGACTATTTGCTaGGGCACGTGTATAATGGCT +
Preference number: 5 (lower is better)
Translates to: LGTDGFMKLKVSVHTYHHSGTIC*GTCIMA
Trigger: AGCCATTATACACGTGCCCAAGCAAATAGTCCCAGA...ATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGTGCCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp CTGGTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCCTGGTCTGGGACTATTaGCTTGGGCACGTGTATAAT +
Preference number: 5 (lower is better)
Translates to: LVFVSYSHSNCLNVVKNILVWDY*LGHVYN
Trigger: ATTATACACGTGCCCAAGCAAATAGTCCCAGACCAG...GATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACACCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp CTGGTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCTTTTGGTACAGCAGCTaGGGAGTTCATTGCTGGTCT +
Preference number: 5 (lower is better)
Translates to: LVFVSYSHSNCLNVVKNIFWYSS*GVHCWS
Trigger: AGACCAGCAATGAACTCCCAAGCTGCTGTACCAAAA...GATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACACCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp CTTGGCACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATTGGACGGATACTTCTTaGTTGCTGTTGCTGGTGTGT +
Preference number: 5 (lower is better)
Translates to: LGTDGFMKLKVSVHTYHHWTDTS*LLLLVC
Trigger: ACACACCAGCAACAGCAACAAAGAAGTATCCGTCCA...ATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGTGCCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp ATAACATTGAATCACAGGAGCTGTGACATATGCTATACTGCTGTGGTGTCAGTAAGCCCTTCCTCTTATTaGGACGGATACTTCTTTGTT +
Preference number: 5 (lower is better)
Translates to: ITLNHRSCDICYTAVVSVSPSSY*DGYFFV
Trigger: AACAAAGAAGTATCCGTCCAAATAAGAGGAAGGGCT...TACTGACACCACAGCAGTATAGCATATGTCACAGCTCCTGTGATTCAATGTTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp CTTGGCACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATTTTATCTTCCTGTATTaGATCCCAGGGAGGCTGGCT +
Preference number: 5 (lower is better)
Translates to: LGTDGFMKLKVSVHTYHHFIFLY*IPGRLA
Trigger: AGCCAGCCTCCCTGGGATCAAATACAGGAAGATAAA...ATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGTGCCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp GTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCAGTGAAGGCCAAAGGTACTaGAGTTTTCCTGAGCCACCT +
Preference number: 5 (lower is better)
Translates to: VFVSYSHSNCLNVVKNISEGQRY*SFPEPP
Trigger: AGGTGGCTCAGGAAAACTCAAGTACCTTTGGCCTTC...ACTGATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp AATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTCTCACAGTAACTGATCTTGGTGGTTCATaGACCACACTATTAGACAAT +
Preference number: 5 (lower is better)
Translates to: NFPDAGNSWCLCPILTVTDLGGS*TTLLDN
Trigger: ATTGTCTAATAGTGTGGTCAATGAACCACCAAGATC...AGTTACTGTGAGAATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp ATAACATTGAATCACAGGAGCTGTGACATATGCTATACTGCTGTGGTGTCAGTAACCTTCACTTTCTGGTaGGTGTTTAATCAAAGGTGG +
Preference number: 5 (lower is better)
Translates to: ITLNHRSCDICYTAVVSVTFTFW*VFNQRW
Trigger: CCACCTTTGATTAAACACCAACCAGAAAGTGAAGGT...TACTGACACCACAGCAGTATAGCATATGTCACAGCTCCTGTGATTCAATGTTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp CTTGGCACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATTTGCCTGGGAGTCTTTaGGTTCGGGTATTAGAGTTG +
Preference number: 5 (lower is better)
Translates to: LGTDGFMKLKVSVHTYHHLPGSL*VRVLEL
Trigger: CAACTCTAATACCCGAACCAAAAGACTCCCAGGCAA...ATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGTGCCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp CTGGTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCTTGCCTGGGAGTCTTTaGGTTCGGGTATTAGAGTTG +
Preference number: 5 (lower is better)
Translates to: LVFVSYSHSNCLNVVKNILPGSL*VRVLEL
Trigger: CAACTCTAATACCCGAACCAAAAGACTCCCAGGCAA...GATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACACCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp ATAACATTGAATCACAGGAGCTGTGACATATGCTATACTGCTGTGGTGTCAGTAGTTTGCTTCAGCTTCTaGACTTTACGCCAATCTTTC +
Preference number: 5 (lower is better)
Translates to: ITLNHRSCDICYTAVVSVVCFSF*TLRQSF
Trigger: GAAAGATTGGCGTAAAGTCAAGAAGCTGAAGCAAAC...TACTGACACCACAGCAGTATAGCATATGTCACAGCTCCTGTGATTCAATGTTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS CCA 90 bp GTGTGGGTGGTCTGGATACAAACTTCTCCTTTGGTAGCAATTCCATaGTATGTGTTTTATCCATATTGCATTCCTGAGGAAGTAAATCAT +
Preference number: 5 (lower is better)
Translates to: VWVVWIQTSPLVAIP*YVFYPYCIPEEVNH
Trigger: ATGATTTACTTCCTCAGGAATGCAATATGGATAAAACACATACCATGGAATTGCTACCAAAGGAGAAGTTTGTATCCAGACCACCCACAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399262.7
ENST00000402544.5
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp CTTGGCACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATCCGGCTTCTGCTAGTTaGAGGCAATCTGTTTTATGT +
Preference number: 5 (lower is better)
Translates to: LGTDGFMKLKVSVHTYHHPASAS*RQSVLC
Trigger: ACATAAAACAGATTGCCTCAAACTAGCAGAAGCCGG...ATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGTGCCAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp ACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATTCAAGGACTTGTCTGGGAAGCTaGCCCATTTCCTACAGAGTT +
Preference number: 5 (lower is better)
Translates to: TDGFMKLKVSVHTYHHSRTCLGS*PISYRV
Trigger: AACTCTGTAGGAAATGGGCAAGCTTCCCAGACAAGT...CCTTGAATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp CTTGGCACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATAGTATGGTAGTTTGGTaGACTTGTCTGGGAAGCTTG +
Preference number: 5 (lower is better)
Translates to: LGTDGFMKLKVSVHTYHHSMVVW*TCLGSL
Trigger: CAAGCTTCCCAGACAAGTCAACCAAACTACCATACT...ATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGTGCCAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp CTTTTATTAACAGGGAATGGAGGCACACTACCAACTGGGAACAAATCACCATTCGTAGAGGCTATTAAGTaGACAGAACATGGCTTAATA +
Preference number: 5 (lower is better)
Translates to: LLLTGNGGTLPTGNKSPFVEAIK*TEHGLI
Trigger: TATTAAGCCATGTTCTGTCAACTTAATAGCCTCTAC...GAATGGTGATTTGTTCCCAGTTGGTAGTGTGCCTCCATTCCCTGTTAATAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327520.7
CDS-3UTR CAA 90 bp AATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTCTCACAGTAACTGTAGAGGCTATTAAGTaGACAGAACATGGCTTAATA +
Preference number: 5 (lower is better)
Translates to: NFPDAGNSWCLCPILTVTVEAIK*TEHGLI
Trigger: TATTAAGCCATGTTCTGTCAACTTAATAGCCTCTAC...AGTTACTGTGAGAATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp CTTGGCACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATGTCCTTTGCTCTGACTaGCTTTCACTTTCATCTGAG +
Preference number: 5 (lower is better)
Translates to: LGTDGFMKLKVSVHTYHHVLCSD*LSLSSE
Trigger: CTCAGATGAAAGTGAAAGCAAGTCAGAGCAAAGGAC...ATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGTGCCAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp TTTATTAACAGGGAATGGAGGCACACTACCAACTGGGAACAAATCACCATTCAAAACTCTTCCTTTCCTTaGCCTTGTAACAATCTAAGC +
Preference number: 5 (lower is better)
Translates to: FINREWRHTTNWEQITIQNSSFP*PCNNLS
Trigger: GCTTAGATTGTTACAAGGCAAAGGAAAGGAAGAGTT...TTGAATGGTGATTTGTTCCCAGTTGGTAGTGTGCCTCCATTCCCTGTTAATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327520.7
CDS-3UTR CAA 90 bp CTTGGCACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATGTCCACTTTTGCTACTaGGGGCTCCCATTGAATATA +
Preference number: 5 (lower is better)
Translates to: LGTDGFMKLKVSVHTYHHVHFCY*GLPLNI
Trigger: TATATTCAATGGGAGCCCCAAGTAGCAAAAGTGGAC...ATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGTGCCAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp AATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTCTCACAGTAACTGGTTTTACATTTATCTaGGAGGTTTTACTTGGTGGA +
Preference number: 5 (lower is better)
Translates to: NFPDAGNSWCLCPILTVTGFTFI*EVLLGG
Trigger: TCCACCAAGTAAAACCTCCAAGATAAATGTAAAACC...AGTTACTGTGAGAATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp GTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCAGTGTTCAGGAGATCAGCTaGGTGGTCTCCAAAATCAAG +
Preference number: 5 (lower is better)
Translates to: VFVSYSHSNCLNVVKNISVQEIS*VVSKIK
Trigger: CTTGATTTTGGAGACCACCAAGCTGATCTCCTGAAC...ACTGATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp ACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATTCAAGGGTTCAGGAGATCAGCTaGGTGGTCTCCAAAATCAAG +
Preference number: 5 (lower is better)
Translates to: TDGFMKLKVSVHTYHHSRVQEIS*VVSKIK
Trigger: CTTGATTTTGGAGACCACCAAGCTGATCTCCTGAAC...CCTTGAATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp ATAACATTGAATCACAGGAGCTGTGACATATGCTATACTGCTGTGGTGTCAGTAACTGTTTCTCCACTCTaGTTTTTCTGCCGTTTTGAA +
Preference number: 5 (lower is better)
Translates to: ITLNHRSCDICYTAVVSVTVSPL*FFCRFE
Trigger: TTCAAAACGGCAGAAAAACAAGAGTGGAGAAACAGT...TACTGACACCACAGCAGTATAGCATATGTCACAGCTCCTGTGATTCAATGTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp ATAGCTACTTTTCGCCACCCAACTAATATCTGGCTCAAGAACAGATCAGTCTTTACAATGAATAAGTCCTaGCTTGAGGGGAAGAGATAT +
Preference number: 5 (lower is better)
Translates to: IATFRHPTNIWLKNRSVFTMNKS*LEGKRY
Trigger: ATATCTCTTCCCCTCAAGCAAGGACTTATTCATTGT...AAAGACTGATCTGTTCTTGAGCCAGATATTAGTTGGGTGGCGAAAAGTAGCTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327520.7
CDS-3UTR CAA 90 bp CTGGTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCCTAGGGTCATTCCTTTaGGCCCAGATTAAGTGGTAT +
Preference number: 5 (lower is better)
Translates to: LVFVSYSHSNCLNVVKNILGSFL*AQIKWY
Trigger: ATACCACTTAATCTGGGCCAAAAGGAATGACCCTAG...GATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACACCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399262.7
CDS-3UTR CAA 90 bp GTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCAGTCTTTCAACCAGAGGTTaGAAAGTCAATGCAGGCCAC +
Preference number: 5 (lower is better)
Translates to: VFVSYSHSNCLNVVKNISLSTRG*KVNAGH
Trigger: GTGGCCTGCATTGACTTTCAAACCTCTGGTTGAAAG...ACTGATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399262.7
CDS-3UTR CAA 90 bp ACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATTCAAGGCTGGGTGGCAGAGTCTaGTCTATATACTCTCACTCT +
Preference number: 5 (lower is better)
Translates to: TDGFMKLKVSVHTYHHSRLGGRV*SIYSHS
Trigger: AGAGTGAGAGTATATAGACAAGACTCTGCCACCCAG...CCTTGAATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp GTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCAGTTCTGGGACTATTTGCTaGGGCACGTGTATAATGGCT +
Preference number: 5 (lower is better)
Translates to: VFVSYSHSNCLNVVKNISSGTIC*GTCIMA
Trigger: AGCCATTATACACGTGCCCAAGCAAATAGTCCCAGA...ACTGATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp ACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATTCAAGGTGGACGGATACTTCTTaGTTGCTGTTGCTGGTGTGT +
Preference number: 5 (lower is better)
Translates to: TDGFMKLKVSVHTYHHSRWTDTS*LLLLVC
Trigger: ACACACCAGCAACAGCAACAAAGAAGTATCCGTCCA...CCTTGAATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp GTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCAGTTTTATCTTCCTGTATTaGATCCCAGGGAGGCTGGCT +
Preference number: 5 (lower is better)
Translates to: VFVSYSHSNCLNVVKNISFIFLY*IPGRLA
Trigger: AGCCAGCCTCCCTGGGATCAAATACAGGAAGATAAA...ACTGATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp CTGGTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCAGATCCAGGTCATTTTaGGCTGATGTGGATGCAACA +
Preference number: 5 (lower is better)
Translates to: LVFVSYSHSNCLNVVKNIRSRSF*ADVDAT
Trigger: TGTTGCATCCACATCAGCCAAAAATGACCTGGATCT...GATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACACCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp ATAACATTGAATCACAGGAGCTGTGACATATGCTATACTGCTGTGGTGTCAGTAGATCTTGGTGGTTCATaGACCACACTATTAGACAAT +
Preference number: 5 (lower is better)
Translates to: ITLNHRSCDICYTAVVSVDLGGS*TTLLDN
Trigger: ATTGTCTAATAGTGTGGTCAATGAACCACCAAGATC...TACTGACACCACAGCAGTATAGCATATGTCACAGCTCCTGTGATTCAATGTTAT
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp CTTGGCACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATGTTCGGGTATTAGAGTaGGAGGCTTCTGTGATTCTT +
Preference number: 5 (lower is better)
Translates to: LGTDGFMKLKVSVHTYHHVRVLE*EASVIL
Trigger: AAGAATCACAGAAGCCTCCAACTCTAATACCCGAAC...ATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGTGCCAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp CTGGTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCGTTCGGGTATTAGAGTaGGAGGCTTCTGTGATTCTT +
Preference number: 5 (lower is better)
Translates to: LVFVSYSHSNCLNVVKNIVRVLE*EASVIL
Trigger: AAGAATCACAGAAGCCTCCAACTCTAATACCCGAAC...GATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACACCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp AATTTCCCAGATGCAGGCAATAGCTGGTGTTTGTGTCCTATTCTCACAGTAACTATGCCAGTATTACTGTaGCTTTGCAACTTCAGTTTA +
Preference number: 5 (lower is better)
Translates to: NFPDAGNSWCLCPILTVTMPVLL*LCNFSL
Trigger: TAAACTGAAGTTGCAAAGCAACAGTAATACTGGCAT...AGTTACTGTGAGAATAGGACACAAACACCAGCTATTGCCTGCATCTGGGAAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp ATAACATTGAATCACAGGAGCTGTGACATATGCTATACTGCTGTGGTGTCAGTAAACTTTGGTCACGTATaGGATCATGTTCTGGTAGAA +
Preference number: 5 (lower is better)
Translates to: ITLNHRSCDICYTAVVSVNFGHV*DHVLVE
Trigger: TTCTACCAGAACATGATCCAATACGTGACCAAAGTT...TACTGACACCACAGCAGTATAGCATATGTCACAGCTCCTGTGATTCAATGTTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp CTGGTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCGGCAATAGCTGGTGTTaGTGTCCTATTCTCACAGTA +
Preference number: 5 (lower is better)
Translates to: LVFVSYSHSNCLNVVKNIGNSWC*CPILTV
Trigger: TACTGTGAGAATAGGACACAAACACCAGCTATTGCC...GATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACACCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp GTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCAGTCTTGCAGCGGCGTCATaGTATAGGAAGAAAAGCCAA +
Preference number: 5 (lower is better)
Translates to: VFVSYSHSNCLNVVKNISLAAAS*YRKKSQ
Trigger: TTGGCTTTTCTTCCTATACAATGACGCCGCTGCAAG...ACTGATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542921.5
CDS-3UTR CAA 90 bp GTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCAGTCCGGCTTCTGCTAGTTaGAGGCAATCTGTTTTATGT +
Preference number: 5 (lower is better)
Translates to: VFVSYSHSNCLNVVKNISPASAS*RQSVLC
Trigger: ACATAAAACAGATTGCCTCAAACTAGCAGAAGCCGG...ACTGATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp ACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATTCAAGGAGTATGGTAGTTTGGTaGACTTGTCTGGGAAGCTTG +
Preference number: 5 (lower is better)
Translates to: TDGFMKLKVSVHTYHHSRSMVVW*TCLGSL
Trigger: CAAGCTTCCCAGACAAGTCAACCAAACTACCATACT...CCTTGAATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp GTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCAGTGTCCTTTGCTCTGACTaGCTTTCACTTTCATCTGAG +
Preference number: 5 (lower is better)
Translates to: VFVSYSHSNCLNVVKNISVLCSD*LSLSSE
Trigger: CTCAGATGAAAGTGAAAGCAAGTCAGAGCAAAGGAC...ACTGATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp CTGGTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCGTAAGTTGGCTTAGGTaGTCTTTTAGTCCTTTGCTC +
Preference number: 5 (lower is better)
Translates to: LVFVSYSHSNCLNVVKNIVSWLR*SFSPLL
Trigger: GAGCAAAGGACTAAAAGACAACCTAAGCCAACTTAC...GATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACACCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp CTTGGCACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATGTAAGTTGGCTTAGGTaGTCTTTTAGTCCTTTGCTC +
Preference number: 5 (lower is better)
Translates to: LGTDGFMKLKVSVHTYHHVSWLR*SFSPLL
Trigger: GAGCAAAGGACTAAAAGACAACCTAAGCCAACTTAC...ATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGTGCCAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp CTTGGCACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATTCTGGAGGAGTTAACTaGTTATCTGTGCCTACATCA +
Preference number: 5 (lower is better)
Translates to: LGTDGFMKLKVSVHTYHHSGGVN*LSVPTS
Trigger: TGATGTAGGCACAGATAACAAGTTAACTCCTCCAGA...ATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGTGCCAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp TTTATTAACAGGGAATGGAGGCACACTACCAACTGGGAACAAATCACCATTCAATTTGGAGATTCAGAGTaGTCTTGTTCTCTTTCTTCT +
Preference number: 5 (lower is better)
Translates to: FINREWRHTTNWEQITIQFGDSE*SCSLSS
Trigger: AGAAGAAAGAGAACAAGACAACTCTGAATCTCCAAA...TTGAATGGTGATTTGTTCCCAGTTGGTAGTGTGCCTCCATTCCCTGTTAATAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327520.7
CDS-3UTR CAA 90 bp GTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCAGTGTCCACTTTTGCTACTaGGGGCTCCCATTGAATATA +
Preference number: 5 (lower is better)
Translates to: VFVSYSHSNCLNVVKNISVHFCY*GLPLNI
Trigger: TATATTCAATGGGAGCCCCAAGTAGCAAAAGTGGAC...ACTGATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp AAGTATCATAGTATCAGATGTGATAGAGTAGAATCATTCCCTAGGTCAGCAGCCGGTTTTACATTTATCTaGGAGGTTTTACTTGGTGGA +
Preference number: 5 (lower is better)
Translates to: KYHSIRCDRVESFPRSAAGFTFI*EVLLGG
Trigger: TCCACCAAGTAAAACCTCCAAGATAAATGTAAAACC...GGCTGCTGACCTAGGGAATGATTCTACTCTATCACATCTGATACTATGATACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327520.7
CDS-3UTR CAA 90 bp ATAACATTGAATCACAGGAGCTGTGACATATGCTATACTGCTGTGGTGTCAGTAGGTTTTACATTTATCTaGGAGGTTTTACTTGGTGGA +
Preference number: 5 (lower is better)
Translates to: ITLNHRSCDICYTAVVSVGFTFI*EVLLGG
Trigger: TCCACCAAGTAAAACCTCCAAGATAAATGTAAAACC...TACTGACACCACAGCAGTATAGCATATGTCACAGCTCCTGTGATTCAATGTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp CTGGTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCGAAATGATGCTATCTTaGCAGTTCAGGAGATCAGCT +
Preference number: 5 (lower is better)
Translates to: LVFVSYSHSNCLNVVKNIEMMLS*QFRRSA
Trigger: AGCTGATCTCCTGAACTGCAAAGATAGCATCATTTC...GATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACACCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp ATAGCTACTTTTCGCCACCCAACTAATATCTGGCTCAAGAACAGATCAGTCTTTGAATGCCATTTCCTTTaGCTATGCCAACATAAACTA +
Preference number: 5 (lower is better)
Translates to: IATFRHPTNIWLKNRSVFECHFL*LCQHKL
Trigger: TAGTTTATGTTGGCATAGCAAAAGGAAATGGCATTC...AAAGACTGATCTGTTCTTGAGCCAGATATTAGTTGGGTGGCGAAAAGTAGCTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327520.7
CDS-3UTR CAA 90 bp ATAGCTACTTTTCGCCACCCAACTAATATCTGGCTCAAGAACAGATCAGTCTTTTCTTCCTCAAATTTCTaGAGAATTCCTGCTTTTGAG +
Preference number: 5 (lower is better)
Translates to: IATFRHPTNIWLKNRSVFSSSNF*RIPAFE
Trigger: CTCAAAAGCAGGAATTCTCAAGAAATTTGAGGAAGA...AAAGACTGATCTGTTCTTGAGCCAGATATTAGTTGGGTGGCGAAAAGTAGCTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327520.7
CDS-3UTR CAA 90 bp ATAACATTGAATCACAGGAGCTGTGACATATGCTATACTGCTGTGGTGTCAGTATCTTCCTCAAATTTCTaGAGAATTCCTGCTTTTGAG +
Preference number: 5 (lower is better)
Translates to: ITLNHRSCDICYTAVVSVSSSNF*RIPAFE
Trigger: CTCAAAAGCAGGAATTCTCAAGAAATTTGAGGAAGA...TACTGACACCACAGCAGTATAGCATATGTCACAGCTCCTGTGATTCAATGTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp AAGTATCATAGTATCAGATGTGATAGAGTAGAATCATTCCCTAGGTCAGCAGCCAAGAGAAACAGGGTTTaGACTTTCAACAAAAACTCC +
Preference number: 5 (lower is better)
Translates to: KYHSIRCDRVESFPRSAAKRNRV*TFNKNS
Trigger: GGAGTTTTTGTTGAAAGTCAAAACCCTGTTTCTCTT...GGCTGCTGACCTAGGGAATGATTCTACTCTATCACATCTGATACTATGATACTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327520.7
CDS-3UTR CAA 90 bp ATAGCTACTTTTCGCCACCCAACTAATATCTGGCTCAAGAACAGATCAGTCTTTGTTTCCATGAAATATTaGTTTTTACATCCCGCGACT +
Preference number: 5 (lower is better)
Translates to: IATFRHPTNIWLKNRSVFVSMKY*FLHPAT
Trigger: AGTCGCGGGATGTAAAAACAAATATTTCATGGAAAC...AAAGACTGATCTGTTCTTGAGCCAGATATTAGTTGGGTGGCGAAAAGTAGCTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327520.7
CDS-3UTR CAA 90 bp CTGGTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCACGGATACTTCTTTGTaGCTGTTGCTGGTGTGTATT +
Preference number: 5 (lower is better)
Translates to: LVFVSYSHSNCLNVVKNITDTSL*LLLVCI
Trigger: AATACACACCAGCAACAGCAACAAAGAAGTATCCGT...GATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACACCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp CTGGTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCAGCCCTTCCTCTTATTaGGACGGATACTTCTTTGTT +
Preference number: 5 (lower is better)
Translates to: LVFVSYSHSNCLNVVKNISPSSY*DGYFFV
Trigger: AACAAAGAAGTATCCGTCCAAATAAGAGGAAGGGCT...GATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACACCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp ATAACATTGAATCACAGGAGCTGTGACATATGCTATACTGCTGTGGTGTCAGTAATACAAACTTCTCCTTaGGTAGCAATTCCATGGTAT +
Preference number: 5 (lower is better)
Translates to: ITLNHRSCDICYTAVVSVIQTSP*VAIPWY
Trigger: ATACCATGGAATTGCTACCAAAGGAGAAGTTTGTAT...TACTGACACCACAGCAGTATAGCATATGTCACAGCTCCTGTGATTCAATGTTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp ATAACATTGAATCACAGGAGCTGTGACATATGCTATACTGCTGTGGTGTCAGTAGATGAAAACTGCATCTaGATAGCTCATGTTCTATCT +
Preference number: 5 (lower is better)
Translates to: ITLNHRSCDICYTAVVSVDENCI*IAHVLS
Trigger: AGATAGAACATGAGCTATCAAGATGCAGTTTTCATC...TACTGACACCACAGCAGTATAGCATATGTCACAGCTCCTGTGATTCAATGTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp ACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATTCAAGGAGATCCAGGTCATTTTaGGCTGATGTGGATGCAACA +
Preference number: 5 (lower is better)
Translates to: TDGFMKLKVSVHTYHHSRRSRSF*ADVDAT
Trigger: TGTTGCATCCACATCAGCCAAAAATGACCTGGATCT...CCTTGAATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp ATAACATTGAATCACAGGAGCTGTGACATATGCTATACTGCTGTGGTGTCAGTAAACATCAATACTTTCTaGAAGAATTCGACGGTGTTC +
Preference number: 5 (lower is better)
Translates to: ITLNHRSCDICYTAVVSVNINTF*KNSTVF
Trigger: GAACACCGTCGAATTCTTCAAGAAAGTATTGATGTT...TACTGACACCACAGCAGTATAGCATATGTCACAGCTCCTGTGATTCAATGTTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp CTGGTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCACCTTCACTTTCTGGTaGGTGTTTAATCAAAGGTGG +
Preference number: 5 (lower is better)
Translates to: LVFVSYSHSNCLNVVKNITFTFW*VFNQRW
Trigger: CCACCTTTGATTAAACACCAACCAGAAAGTGAAGGT...GATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACACCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp GTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCAGTTCACCGGAGTTAAAGTaGGAGGGGAAAGACTACTAT +
Preference number: 5 (lower is better)
Translates to: VFVSYSHSNCLNVVKNISSPELK*EGKDYY
Trigger: ATAGTAGTCTTTCCCCTCCAACTTTAACTCCGGTGA...ACTGATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp CTGGTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCGTTTGCTTCAGCTTCTaGACTTTACGCCAATCTTTC +
Preference number: 5 (lower is better)
Translates to: LVFVSYSHSNCLNVVKNIVCFSF*TLRQSF
Trigger: GAAAGATTGGCGTAAAGTCAAGAAGCTGAAGCAAAC...GATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACACCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp CTGGTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCGTTCACATACCAACTTaGGTCACGTATTGGATCATG +
Preference number: 5 (lower is better)
Translates to: LVFVSYSHSNCLNVVKNIVHIPT*VTYWIM
Trigger: CATGATCCAATACGTGACCAAAGTTGGTATGTGAAC...GATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACACCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp GTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCAGTTTCTTCAAGCAGCCTTaGACGGAGCTTTTTGTTCAC +
Preference number: 5 (lower is better)
Translates to: VFVSYSHSNCLNVVKNISFFKQP*TELFVH
Trigger: GTGAACAAAAAGCTCCGTCAAAGGCTGCTTGAAGAA...ACTGATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp ACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATTCAAGGTTCTTCAAGCAGCCTTaGACGGAGCTTTTTGTTCAC +
Preference number: 5 (lower is better)
Translates to: TDGFMKLKVSVHTYHHSRFFKQP*TELFVH
Trigger: GTGAACAAAAAGCTCCGTCAAAGGCTGCTTGAAGAA...CCTTGAATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS GCA 90 bp GTATTAAGTTTAGATTTTATAGTCTCTGGAGGTGGACTTCGCTTATaGAGCTTATCTTCCATGACAGAAACTGCACTTAAAGGAGAAATG +
Preference number: 5 (lower is better)
Translates to: VLSLDFIVSGGGLRL*SLSSMTETALKGEM
Trigger: CATTTCTCCTTTAAGTGCAGTTTCTGTCATGGAAGATAAGCTGCATAAGCGAAGTCCACCTCCAGAGACTATAAAATCTAAACTTAATAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399262.7
ENST00000402544.5
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp ACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATTCAAGGCTGCTGAGAACTCCATaGGGTTTCAAATCTTCTTCT +
Preference number: 5 (lower is better)
Translates to: TDGFMKLKVSVHTYHHSRLLRTP*GFKSSS
Trigger: AGAAGAAGATTTGAAACCCAATGGAGTTCTCAGCAG...CCTTGAATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp CTGGTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCAACTCTTCCTTTCCTTaGCCTTGTAACAATCTAAGC +
Preference number: 5 (lower is better)
Translates to: LVFVSYSHSNCLNVVKNINSSFP*PCNNLS
Trigger: GCTTAGATTGTTACAAGGCAAAGGAAAGGAAGAGTT...GATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACACCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp ACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATTCAAGGGTGATGTTCTGCCATTaGGAGATTCAGAGTTGTCTT +
Preference number: 5 (lower is better)
Translates to: TDGFMKLKVSVHTYHHSRVMFCH*EIQSCL
Trigger: AAGACAACTCTGAATCTCCAAATGGCAGAACATCAC...CCTTGAATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp GTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCAGTGTGATGTTCTGCCATTaGGAGATTCAGAGTTGTCTT +
Preference number: 5 (lower is better)
Translates to: VFVSYSHSNCLNVVKNISVMFCH*EIQSCL
Trigger: AAGACAACTCTGAATCTCCAAATGGCAGAACATCAC...ACTGATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp CTTGGCACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATACTGTTTCTCCACTCTaGTTTTTCTGCCGTTTTGAA +
Preference number: 5 (lower is better)
Translates to: LGTDGFMKLKVSVHTYHHTVSPL*FFCRFE
Trigger: TTCAAAACGGCAGAAAAACAAGAGTGGAGAAACAGT...ATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGTGCCAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp GTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCAGTAGCCCTTCCTCTTATTaGGACGGATACTTCTTTGTT +
Preference number: 5 (lower is better)
Translates to: VFVSYSHSNCLNVVKNISSPSSY*DGYFFV
Trigger: AACAAAGAAGTATCCGTCCAAATAAGAGGAAGGGCT...ACTGATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp ACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATTCAAGGTCACCCTCAAGTCCCTaGATTTTAGTTGTAAAGGGA +
Preference number: 5 (lower is better)
Translates to: TDGFMKLKVSVHTYHHSRSPSSP*ILVVKG
Trigger: TCCCTTTACAACTAAAATCAAGGGACTTGAGGGTGA...CCTTGAATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp GTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCAGTACCTTCACTTTCTGGTaGGTGTTTAATCAAAGGTGG +
Preference number: 5 (lower is better)
Translates to: VFVSYSHSNCLNVVKNISTFTFW*VFNQRW
Trigger: CCACCTTTGATTAAACACCAACCAGAAAGTGAAGGT...ACTGATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp ACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATTCAAGGGTTTGCTTCAGCTTCTaGACTTTACGCCAATCTTTC +
Preference number: 5 (lower is better)
Translates to: TDGFMKLKVSVHTYHHSRVCFSF*TLRQSF
Trigger: GAAAGATTGGCGTAAAGTCAAGAAGCTGAAGCAAAC...CCTTGAATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp CTGGTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCGTAGAGGCTATTAAGTaGACAGAACATGGCTTAATA +
Preference number: 5 (lower is better)
Translates to: LVFVSYSHSNCLNVVKNIVEAIK*TEHGLI
Trigger: TATTAAGCCATGTTCTGTCAACTTAATAGCCTCTAC...GATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACACCAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp CTTGGCACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATTTTGGAGATTCAGAGTaGTCTTGTTCTCTTTCTTCT +
Preference number: 5 (lower is better)
Translates to: LGTDGFMKLKVSVHTYHHFGDSE*SCSLSS
Trigger: AGAAGAAAGAGAACAAGACAACTCTGAATCTCCAAA...ATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGTGCCAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp CTTGGCACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATGAATGCCATTTCCTTTaGCTATGCCAACATAAACTA +
Preference number: 5 (lower is better)
Translates to: LGTDGFMKLKVSVHTYHHECHFL*LCQHKL
Trigger: TAGTTTATGTTGGCATAGCAAAAGGAAATGGCATTC...ATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGTGCCAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp GTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCAGTAATCTCCTGAACCTTTaGTTCCTTTACCCAGACTTT +
Preference number: 5 (lower is better)
Translates to: VFVSYSHSNCLNVVKNISNLLNL*FLYPDF
Trigger: AAAGTCTGGGTAAAGGAACAAAAGGTTCAGGAGATT...ACTGATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399262.7
ENST00000542921.5
CDS-3UTR CAA 90 bp GTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCAGTACTTCTTTGTTGCTGTaGCTGGTGTGTATTCTGTTT +
Preference number: 5 (lower is better)
Translates to: VFVSYSHSNCLNVVKNISTSLLL*LVCILF
Trigger: AAACAGAATACACACCAGCAACAGCAACAAAGAAGT...ACTGATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp ACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATTCAAGGACTTCTTTGTTGCTGTaGCTGGTGTGTATTCTGTTT +
Preference number: 5 (lower is better)
Translates to: TDGFMKLKVSVHTYHHSRTSLLL*LVCILF
Trigger: AAACAGAATACACACCAGCAACAGCAACAAAGAAGT...CCTTGAATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp CTTGGCACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATGAAAAGTCTGAAACATaGTCAGTTCGAAGTCTTTTC +
Preference number: 5 (lower is better)
Translates to: LGTDGFMKLKVSVHTYHHEKSET*SVRSLF
Trigger: GAAAAGACTTCGAACTGACAATGTTTCAGACTTTTC...ATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGTGCCAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp CTGGTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCGAAAAGTCTGAAACATaGTCAGTTCGAAGTCTTTTC +
Preference number: 5 (lower is better)
Translates to: LVFVSYSHSNCLNVVKNIEKSET*SVRSLF
Trigger: GAAAAGACTTCGAACTGACAATGTTTCAGACTTTTC...GATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACACCAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp CTTGGCACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATATACAAACTTCTCCTTaGGTAGCAATTCCATGGTAT +
Preference number: 5 (lower is better)
Translates to: LGTDGFMKLKVSVHTYHHIQTSP*VAIPWY
Trigger: ATACCATGGAATTGCTACCAAAGGAGAAGTTTGTAT...ATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGTGCCAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp CTTGGCACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATGATCTACTAAAGTTTTaGTCAATGGTGGACTGGAAT +
Preference number: 5 (lower is better)
Translates to: LGTDGFMKLKVSVHTYHHDLLKF*SMVDWN
Trigger: ATTCCAGTCCACCATTGACAAAAACTTTAGTAGATC...ATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGTGCCAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp ACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATTCAAGGGATCTTGGTGGTTCATaGACCACACTATTAGACAAT +
Preference number: 5 (lower is better)
Translates to: TDGFMKLKVSVHTYHHSRDLGGS*TTLLDN
Trigger: ATTGTCTAATAGTGTGGTCAATGAACCACCAAGATC...CCTTGAATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp GTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCAGTAACTTTGGTCACGTATaGGATCATGTTCTGGTAGAA +
Preference number: 5 (lower is better)
Translates to: VFVSYSHSNCLNVVKNISNFGHV*DHVLVE
Trigger: TTCTACCAGAACATGATCCAATACGTGACCAAAGTT...ACTGATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp ACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATTCAAGGGGTTTTACATTTATCTaGGAGGTTTTACTTGGTGGA +
Preference number: 5 (lower is better)
Translates to: TDGFMKLKVSVHTYHHSRGFTFI*EVLLGG
Trigger: TCCACCAAGTAAAACCTCCAAGATAAATGTAAAACC...CCTTGAATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp ACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATTCAAGGGAATGCCATTTCCTTTaGCTATGCCAACATAAACTA +
Preference number: 5 (lower is better)
Translates to: TDGFMKLKVSVHTYHHSRECHFL*LCQHKL
Trigger: TAGTTTATGTTGGCATAGCAAAAGGAAATGGCATTC...CCTTGAATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp GTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCAGTCATGTTCTATCTTATTaGCCAATCTTCTTTCACCAG +
Preference number: 5 (lower is better)
Translates to: VFVSYSHSNCLNVVKNISHVLSY*PIFFHQ
Trigger: CTGGTGAAAGAAGATTGGCAAATAAGATAGAACATG...ACTGATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp ACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATTCAAGGCATGTTCTATCTTATTaGCCAATCTTCTTTCACCAG +
Preference number: 5 (lower is better)
Translates to: TDGFMKLKVSVHTYHHSRHVLSY*PIFFHQ
Trigger: CTGGTGAAAGAAGATTGGCAAATAAGATAGAACATG...CCTTGAATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp ACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATTCAAGGGATGAAAACTGCATCTaGATAGCTCATGTTCTATCT +
Preference number: 5 (lower is better)
Translates to: TDGFMKLKVSVHTYHHSRDENCI*IAHVLS
Trigger: AGATAGAACATGAGCTATCAAGATGCAGTTTTCATC...CCTTGAATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp GTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCAGTGATCTACTAAAGTTTTaGTCAATGGTGGACTGGAAT +
Preference number: 5 (lower is better)
Translates to: VFVSYSHSNCLNVVKNISDLLKF*SMVDWN
Trigger: ATTCCAGTCCACCATTGACAAAAACTTTAGTAGATC...ACTGATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp ACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATTCAAGGGATCTACTAAAGTTTTaGTCAATGGTGGACTGGAAT +
Preference number: 5 (lower is better)
Translates to: TDGFMKLKVSVHTYHHSRDLLKF*SMVDWN
Trigger: ATTCCAGTCCACCATTGACAAAAACTTTAGTAGATC...CCTTGAATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp ACTGATGGTTTTATGAAGCTTAAAGTCAGTGTGCATACATATCATCATTCAAGGAACATCAATACTTTCTaGAAGAATTCGACGGTGTTC +
Preference number: 5 (lower is better)
Translates to: TDGFMKLKVSVHTYHHSRNINTF*KNSTVF
Trigger: GAACACCGTCGAATTCTTCAAGAAAGTATTGATGTT...CCTTGAATGATGATATGTATGCACACTGACTTTAAGCTTCATAAAACCATCAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS-3UTR CAA 90 bp GTGTTTGTGTCCTATTCTCACAGTAACTGTCTCAATGTAGTGAAAAATATCAGTATGCCAGTATTACTGTaGCTTTGCAACTTCAGTTTA +
Preference number: 5 (lower is better)
Translates to: VFVSYSHSNCLNVVKNISMPVLL*LCNFSL
Trigger: TAAACTGAAGTTGCAAAGCAACAGTAATACTGGCAT...ACTGATATTTTTCACTACATTGAGACAGTTACTGTGAGAATAGGACACAAACAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS TCA 72 bp CCGGATTGCGGCTGTCCCTGTGTGACACGGCTCGGATaGCCCCCGCTCGCCAGCTTCGCCAGCCGCGTCCGC +
Preference number: 6 (lower is better)
Translates to: PDCGCPCVTRLG*PPLASFASRVR
Trigger: GCGGACGCGGCTGGCGAAGCTGGCGAGCGGGGGTCATCCGAGCCGTGTCACACAGGGACAGCCGCAATCCGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399262.7
CDS GCA 72 bp CCGAAAGAGCGCAGACTCGGGACGAACCGGCCGCTCTaGCCCGGACACAGCGACCTCGGGCCCTCCCCGCAA +
Preference number: 6 (lower is better)
Translates to: PKERRLGTNRPL*PGHSDLGPSPQ
Trigger: TTGCGGGGAGGGCCCGAGGTCGCTGTGTCCGGGGCAGAGCGGCCGGTTCGTCCCGAGTCTGCGCTCTTTCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399262.7
CDS GCA 72 bp TCGCCAGCCGCGTCCGCTCTCCCAGCGCTCCGAACGTaGCTCGTCGCCGACCGCCACACACAGGAACCGCTT +
Preference number: 6 (lower is better)
Translates to: SPAASALPALRT*LVADRHTQEPL
Trigger: AAGCGGTTCCTGTGTGTGGCGGTCGGCGACGAGGCACGTTCGGAGCGCTGGGAGAGCGGACGCGGCTGGCGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399262.7
CDS GCA 72 bp CACATACACCTTGGTCCACGTCGCTGCGGAGCTCCCTaGGACGGCCGAGGGCCTAGCTGCGGCGACTGCGGC +
Preference number: 6 (lower is better)
Translates to: HIHLGPRRCGAP*DGRGPSCGDCG
Trigger: GCCGCAGTCGCCGCAGCTAGGCCCTCGGCCGTCGCAGGGAGCTCCGCAGCGACGTGGACCAAGGTGTATGTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000633035.1
CDS GCA 72 bp CAGCTCTGCCCGCGTCTCTACCGCCATAGCTGTCGCTaGCGAAGCGGCCGCTGCCTCCTCCAGTGCGAGGGA +
Preference number: 6 (lower is better)
Translates to: QLCPRLYRHSCR*RSGRCLLQCEG
Trigger: TCCCTCGCACTGGAGGAGGCAGCGGCCGCTTCGGCAGCGACAGCTATGGCGGTAGAGACGCGGGCAGAGCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399262.7
CDS TCA 72 bp ATACACCGCCAGGTCCGGATTGCGGCTGTCCCTGTGTaGCACGGCTCGGATGACCCCCGCTCGCCAGCTTCG +
Preference number: 6 (lower is better)
Translates to: IHRQVRIAAVPV*HGSDDPRSPAS
Trigger: CGAAGCTGGCGAGCGGGGGTCATCCGAGCCGTGTCACACAGGGACAGCCGCAATCCGGACCTGGCGGTGTAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399262.7
CDS GCA 72 bp GACCGCCACACACAGGAACCGCTTACCCACCAGCTCTaGCCGCGTCTCTACCGCCATAGCTGTCGCTGCCGA +
Preference number: 6 (lower is better)
Translates to: DRHTQEPLTHQL*PRLYRHSCRCR
Trigger: TCGGCAGCGACAGCTATGGCGGTAGAGACGCGGGCAGAGCTGGTGGGTAAGCGGTTCCTGTGTGTGGCGGTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399262.7
CDS CCA 72 bp CACAGCGACCTCGGGCCCTCCCCGCAAACACTCCTTTaGACTCCCAGATTCGCAGCCTTGTGCTGCAGCGCC +
Preference number: 6 (lower is better)
Translates to: HSDLGPSPQTLL*TPRFAALCCSA
Trigger: GGCGCTGCAGCACAAGGCTGCGAATCTGGGAGTCCAAAGGAGTGTTTGCGGGGAGGGCCCGAGGTCGCTGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399262.7
CDS CAA 90 bp CTGCCCCGGACACAGCGACCTCGGGCCCTCCCCGCAAACACTCCTTaGGACTCCCAGATTCGCAGCCTTGTGCTGCAGCGCCACACAAGA +
Preference number: 6 (lower is better)
Translates to: LPRTQRPRALPANTP*DSQIRSLVLQRHTR
Trigger: TCTTGTGTGGCGCTGCAGCACAAGGCTGCGAATCTGGGAGTCCAAAGGAGTGTTTGCGGGGAGGGCCCGAGGTCGCTGTGTCCGGGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399262.7
CDS GCA 72 bp CTCTACCGCCATAGCTGTCGCTGCCGAAGCGGCCGCTaGCTCCTCCAGTGCGAGGGAACCGATGAAACCTCA +
Preference number: 6 (lower is better)
Translates to: LYRHSCRCRSGR*LLQCEGTDETS
Trigger: TGAGGTTTCATCGGTTCCCTCGCACTGGAGGAGGCAGCGGCCGCTTCGGCAGCGACAGCTATGGCGGTAGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399262.7
CDS CAA 72 bp ACACAGCGACCTCGGGCCCTCCCCGCAAACACTCCTTaGGACTCCCAGATTCGCAGCCTTGTGCTGCAGCGC +
Preference number: 6 (lower is better)
Translates to: TQRPRALPANTP*DSQIRSLVLQR
Trigger: GCGCTGCAGCACAAGGCTGCGAATCTGGGAGTCCAAAGGAGTGTTTGCGGGGAGGGCCCGAGGTCGCTGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399262.7
CDS GCA 72 bp ATCATCAAATTCCACATACACCTTGGTCCACGTCGCTaGGGAGCTCCCTGCGACGGCCGAGGGCCTAGCTGC +
Preference number: 6 (lower is better)
Translates to: IIKFHIHLGPRR*GAPCDGRGPSC
Trigger: GCAGCTAGGCCCTCGGCCGTCGCAGGGAGCTCCGCAGCGACGTGGACCAAGGTGTATGTGGAATTTGATGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000633035.1
CDS GCA 72 bp GTTGTTGCTGGTGTGCTAGCGCTAAGTGGCTCAAGCTaGTGGCATGAGCACTCTCTAGTCGTGGGTGGCCAC +
Preference number: 6 (lower is better)
Translates to: VVAGVLALSGSS*WHEHSLVVGGH
Trigger: GTGGCCACCCACGACTAGAGAGTGCTCATGCCAGCAGCTTGAGCCACTTAGCGCTAGCACACCAGCAACAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399262.7
ENST00000402544.5
ENST00000542921.5
ENST00000639129.1
CDS CCA 72 bp GTTGCTGGTGTGCTAGCGCTAAGTGGCTCAAGCTGCTaGCATGAGCACTCTCTAGTCGTGGGTGGCCACCAA +
Preference number: 6 (lower is better)
Translates to: VAGVLALSGSSC*HEHSLVVGGHQ
Trigger: TTGGTGGCCACCCACGACTAGAGAGTGCTCATGCCAGCAGCTTGAGCCACTTAGCGCTAGCACACCAGCAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399262.7
ENST00000402544.5
ENST00000542921.5
ENST00000639129.1
CDS TCA 72 bp TGGTGTGCTAGCGCTAAGTGGCTCAAGCTGCTGGCATaGGCACTCTCTAGTCGTGGGTGGCCACCAAGTAAG +
Preference number: 6 (lower is better)
Translates to: WCASAKWLKLLA*ALSSRGWPPSK
Trigger: CTTACTTGGTGGCCACCCACGACTAGAGAGTGCTCATGCCAGCAGCTTGAGCCACTTAGCGCTAGCACACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399262.7
ENST00000402544.5
ENST00000542921.5
ENST00000639129.1
CDS CCA 72 bp GCTGGAGAAAGCCTTTCCCACTGTACTCTGTCTGCGTaGAAACACAGTGCAGTAGCTTCCAACAGTGCAGAC +
Preference number: 6 (lower is better)
Translates to: AGESLSHCTLSA*KHSAVASNSAD
Trigger: GTCTGCACTGTTGGAAGCTACTGCACTGTGTTTCCACGCAGACAGAGTACAGTGGGAAAGGCTTTCTCCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489372.4
CDS TCA 72 bp AGACTTTCACTTCCTCATGAAGCTGCGGGTTGTCCCTaGGAACTGGGTTTAGGCTGTCTATGTCGTCCTGGT +
Preference number: 6 (lower is better)
Translates to: RLSLPHEAAGCP*ELGLGCLCRPG
Trigger: ACCAGGACGACATAGACAGCCTAAACCCAGTTCTCAGGGACAACCCGCAGCTTCATGAGGAAGTGAAAGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399262.7
ENST00000469152.5
ENST00000542921.5
ENST00000633035.1
CDS GCA 72 bp CCTTTCCCACTGTACTCTGTCTGCGTGGAAACACAGTaGAGTAGCTTCCAACAGTGCAGACACCCAAATGAG +
Preference number: 6 (lower is better)
Translates to: PFPLYSVCVETQ*SSFQQCRHPNE
Trigger: CTCATTTGGGTGTCTGCACTGTTGGAAGCTACTGCACTGTGTTTCCACGCAGACAGAGTACAGTGGGAAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489372.4
CDS GCA 72 bp ATCAGCTGGAGAAAGCCTTTCCCACTGTACTCTGTCTaGGTGGAAACACAGTGCAGTAGCTTCCAACAGTGC +
Preference number: 6 (lower is better)
Translates to: ISWRKPFPLYSV*VETQCSSFQQC
Trigger: GCACTGTTGGAAGCTACTGCACTGTGTTTCCACGCAGACAGAGTACAGTGGGAAAGGCTTTCTCCAGCTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489372.4
CDS CAA 72 bp CAGTGCAGTGGTGACTGGGATTCTGGAGGAGTTAACTaGTTATCTGTGCCTACATCACTCTCTGGGCTGCTG +
Preference number: 6 (lower is better)
Translates to: QCSGDWDSGGVN*LSVPTSLSGLL
Trigger: CAGCAGCCCAGAGAGTGATGTAGGCACAGATAACAAGTTAACTCCTCCAGAATCCCAGTCACCACTGCACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000327520.7
ENST00000399262.7
ENST00000402544.5
ENST00000490669.1
ENST00000497922.1
ENST00000542921.5
ENST00000639129.1
CDS CAA 72 bp CAGCAGCTTGGGAGTTCATTGCTGGTCTGGGACTATTaGCTTGGGCACGTGTATAATGGCTGTGAACAGCGT +
Preference number: 6 (lower is better)
Translates to: QQLGSSLLVWDY*LGHVYNGCEQR
Trigger: ACGCTGTTCACAGCCATTATACACGTGCCCAAGCAAATAGTCCCAGACCAGCAATGAACTCCCAAGCTGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399262.7
ENST00000402544.5
ENST00000542921.5
ENST00000639129.1
CDS CAA 90 bp TGGCTCTCAAACCAAGCATTTCTGAGCTCACTTGCAGCGGCGTCATaGTATAGGAAGAAAAGCCAAGACCACAGAACGAAGCAGGAGCTG +
Preference number: 6 (lower is better)
Translates to: WLSNQAFLSSLAAAS*YRKKSQDHRTKQEL
Trigger: CAGCTCCTGCTTCGTTCTGTGGTCTTGGCTTTTCTTCCTATACAATGACGCCGCTGCAAGTGAGCTCAGAAATGCTTGGTTTGAGAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402544.5
ENST00000489372.4
ENST00000542921.5
CDS TCA 72 bp AATCCAATACCATCTGCTGAGGTCACAGGGGTGGGCTaGTGTAGCCAAGGACTGGGAGAATTCCTCCTTAAT +
Preference number: 6 (lower is better)
Translates to: NPIPSAEVTGVG*CSQGLGEFLLN
Trigger: ATTAAGGAGGAATTCTCCCAGTCCTTGGCTACATCAGCCCACCCCTGTGACCTCAGCAGATGGTATTGGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399262.7
ENST00000402544.5
ENST00000542921.5
ENST00000639129.1
CDS TCA 72 bp AGCACTGTGGTGTTAACGACTAAGAAATCCTGCAGCTaGAGCACTACTGCATCCTCCGATCTGGGTCAGGAT +
Preference number: 6 (lower is better)
Translates to: STVVLTTKKSCS*STTASSDLGQD
Trigger: ATCCTGACCCAGATCGGAGGATGCAGTAGTGCTTCAGCTGCAGGATTTCTTAGTCGTTAACACCACAGTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402544.5
ENST00000489372.4
CDS GCA 72 bp AGCAGCTTGGGAGTTCATTGCTGGTCTGGGACTATTTaGTTGGGCACGTGTATAATGGCTGTGAACAGCGTT +
Preference number: 6 (lower is better)
Translates to: SSLGVHCWSGTI*LGTCIMAVNSV
Trigger: AACGCTGTTCACAGCCATTATACACGTGCCCAAGCAAATAGTCCCAGACCAGCAATGAACTCCCAAGCTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399262.7
ENST00000402544.5
ENST00000542921.5
ENST00000639129.1
CDS CAA 72 bp AGCTTGGGAGTTCATTGCTGGTCTGGGACTATTTGCTaGGGCACGTGTATAATGGCTGTGAACAGCGTTGAC +
Preference number: 6 (lower is better)
Translates to: SLGVHCWSGTIC*GTCIMAVNSVD
Trigger: GTCAACGCTGTTCACAGCCATTATACACGTGCCCAAGCAAATAGTCCCAGACCAGCAATGAACTCCCAAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399262.7
ENST00000402544.5
ENST00000542921.5
ENST00000639129.1
CDS GCA 72 bp TCTCTGGCTTTTTGCTCTGCAAGATCTGCTAACCAGTaGAGTGGTGACTGGGATTCTGGAGGAGTTAACTTG +
Preference number: 6 (lower is better)
Translates to: SLAFCSARSANQ*SGDWDSGGVNL
Trigger: CAAGTTAACTCCTCCAGAATCCCAGTCACCACTGCACTGGTTAGCAGATCTTGCAGAGCAAAAAGCCAGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000327520.7
ENST00000399262.7
ENST00000402544.5
ENST00000490669.1
ENST00000497922.1
ENST00000542921.5
ENST00000639129.1
CDS CCA 72 bp GTTTTGGTACAGCAGCTTGGGAGTTCATTGCTGGTCTaGGACTATTTGCTTGGGCACGTGTATAATGGCTGT +
Preference number: 6 (lower is better)
Translates to: VLVQQLGSSLLV*DYLLGHVYNGC
Trigger: ACAGCCATTATACACGTGCCCAAGCAAATAGTCCCAGACCAGCAATGAACTCCCAAGCTGCTGTACCAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399262.7
ENST00000402544.5
ENST00000542921.5
ENST00000639129.1
CDS CAA 90 bp TGGTACAGCAGCTTGGGAGTTCATTGCTGGTCTGGGACTATTTGCTaGGGCACGTGTATAATGGCTGTGAACAGCGTTGACGTTTTGATT +
Preference number: 6 (lower is better)
Translates to: WYSSLGVHCWSGTIC*GTCIMAVNSVDVLI
Trigger: AATCAAAACGTCAACGCTGTTCACAGCCATTATACACGTGCCCAAGCAAATAGTCCCAGACCAGCAATGAACTCCCAAGCTGCTGTACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399262.7
ENST00000402544.5
ENST00000542921.5
ENST00000639129.1
CDS CAA 90 bp GTTGCTGGTGTGTATTCTGTTTTGGTACAGCAGCTTGGGAGTTCATaGCTGGTCTGGGACTATTTGCTTGGGCACGTGTATAATGGCTGT +
Preference number: 6 (lower is better)
Translates to: VAGVYSVLVQQLGSS*LVWDYLLGHVYNGC
Trigger: ACAGCCATTATACACGTGCCCAAGCAAATAGTCCCAGACCAGCAATGAACTCCCAAGCTGCTGTACCAAAACAGAATACACACCAGCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399262.7
ENST00000402544.5
ENST00000542921.5
ENST00000639129.1
CDS CAA 90 bp CTCTGGGCTGCTGCCACCATTTTTCTCAGACTTCGGAGGAGTATTTaGCTGCTGAGACTCAGGCATGCACAGAGAAATTTTATTACTGTG +
Preference number: 6 (lower is better)
Translates to: LWAAATIFLRLRRSI*LLRLRHAQRNFITV
Trigger: CACAGTAATAAAATTTCTCTGTGCATGCCTGAGTCTCAGCAGCAAAATACTCCTCCGAAGTCTGAGAAAAATGGTGGCAGCAGCCCAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000327520.7
ENST00000399262.7
ENST00000490669.1
ENST00000497922.1
ENST00000542921.5
ENST00000639129.1
CDS TCA 72 bp CCGTTTTGGTATTACACATCGTATTTACAGCAGACATaGCTGAACTGGGAACACTGCCCTGTGAGACAGCCT +
Preference number: 6 (lower is better)
Translates to: PFWYYTSYLQQT*LNWEHCPVRQP
Trigger: AGGCTGTCTCACAGGGCAGTGTTCCCAGTTCAGTCATGTCTGCTGTAAATACGATGTGTAATACCAAAACGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327520.7
ENST00000399262.7
ENST00000402544.5
ENST00000542921.5
ENST00000639129.1
CDS CCA 72 bp TGTTGCTGGTGTGTATTCTGTTTTGGTACAGCAGCTTaGGAGTTCATTGCTGGTCTGGGACTATTTGCTTGG +
Preference number: 6 (lower is better)
Translates to: CCWCVFCFGTAA*EFIAGLGLFAW
Trigger: CCAAGCAAATAGTCCCAGACCAGCAATGAACTCCCAAGCTGCTGTACCAAAACAGAATACACACCAGCAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399262.7
ENST00000402544.5
ENST00000542921.5
ENST00000639129.1
CDS CAA 72 bp GTGTATTCTGTTTTGGTACAGCAGCTTGGGAGTTCATaGCTGGTCTGGGACTATTTGCTTGGGCACGTGTAT +
Preference number: 6 (lower is better)
Translates to: VYSVLVQQLGSS*LVWDYLLGHVY
Trigger: ATACACGTGCCCAAGCAAATAGTCCCAGACCAGCAATGAACTCCCAAGCTGCTGTACCAAAACAGAATACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399262.7
ENST00000402544.5
ENST00000542921.5
ENST00000639129.1
CDS CAA 72 bp CTGTTGCTGGTGTGTATTCTGTTTTGGTACAGCAGCTaGGGAGTTCATTGCTGGTCTGGGACTATTTGCTTG +
Preference number: 6 (lower is better)
Translates to: LLLVCILFWYSS*GVHCWSGTICL
Trigger: CAAGCAAATAGTCCCAGACCAGCAATGAACTCCCAAGCTGCTGTACCAAAACAGAATACACACCAGCAACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399262.7
ENST00000402544.5
ENST00000542921.5
ENST00000639129.1
CDS CAA 90 bp GTGTCTGGTGAGCCAGGCCTTTTTCAGTTTAGTATGGTAGTTTGGTaGACTTGTCTGGGAAGCTTGCCCATTTCCTACAGAGTTTGCTTT +
Preference number: 6 (lower is better)
Translates to: VSGEPGLFQFSMVVW*TCLGSLPISYRVCF
Trigger: AAAGCAAACTCTGTAGGAAATGGGCAAGCTTCCCAGACAAGTCAACCAAACTACCATACTAAACTGAAAAAGGCCTGGCTCACCAGACAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000327520.7
ENST00000399262.7
ENST00000402544.5
ENST00000542921.5
ENST00000639129.1
CDS CAA 90 bp TTGGACGGATACTTCTTTGTTGCTGTTGCTGGTGTGTATTCTGTTTaGGTACAGCAGCTTGGGAGTTCATTGCTGGTCTGGGACTATTTG +
Preference number: 6 (lower is better)
Translates to: LDGYFFVAVAGVYSV*VQQLGSSLLVWDYL
Trigger: CAAATAGTCCCAGACCAGCAATGAACTCCCAAGCTGCTGTACCAAAACAGAATACACACCAGCAACAGCAACAAAGAAGTATCCGTCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399262.7
ENST00000402544.5
ENST00000542921.5
ENST00000639129.1
CDS CAA 90 bp AAAGACTACTATAGCTGCCTTCCTTTCTTTCCAGGCTGTGATGGATaGGTGGGTGAAATACTGGTGCTCTATGTAATGCAGGCATACTGC +
Preference number: 6 (lower is better)
Translates to: KDYYSCLPFFPGCDG*VGEILVLYVMQAYC
Trigger: GCAGTATGCCTGCATTACATAGAGCACCAGTATTTCACCCACCAATCCATCACAGCCTGGAAAGAAAGGAAGGCAGCTATAGTAGTCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399262.7
ENST00000402544.5
ENST00000542921.5
ENST00000639129.1
CDS TCA 72 bp AACCTCTCTCCAGTCTCCTGGGGTGGCCTCTGTAACTaGTTTAATACTGGATCCACAAAATGCCTATGTAAG +
Preference number: 6 (lower is better)
Translates to: NLSPVSWGGLCN*FNTGSTKCLCK
Trigger: CTTACATAGGCATTTTGTGGATCCAGTATTAAATCAGTTACAGAGGCCACCCCAGGAGACTGGAGAGAGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399262.7
ENST00000402544.5
ENST00000542921.5
ENST00000639129.1
CDS TCA 72 bp AAATCACAGGCAAATGGCTCTCAAACCAAGCATTTCTaGGCTCACTTGCAGCGGCGTCATTGTATAGGAAGA +
Preference number: 6 (lower is better)
Translates to: KSQANGSQTKHF*AHLQRRHCIGR
Trigger: TCTTCCTATACAATGACGCCGCTGCAAGTGAGCTCAGAAATGCTTGGTTTGAGAGCCATTTGCCTGTGATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402544.5
ENST00000469152.5
ENST00000489372.4
ENST00000542921.5
CDS GCA 72 bp ACTTGTTATCTGTGCCTACATCACTCTCTGGGCTGCTaGCACCATTTTTCTCAGACTTCGGAGGAGTATTTT +
Preference number: 6 (lower is better)
Translates to: TCYLCLHHSLGC*HHFSQTSEEYF
Trigger: AAAATACTCCTCCGAAGTCTGAGAAAAATGGTGGCAGCAGCCCAGAGAGTGATGTAGGCACAGATAACAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000327520.7
ENST00000399262.7
ENST00000402544.5
ENST00000490669.1
ENST00000497922.1
ENST00000542921.5
ENST00000639129.1
CDS GCA 72 bp TGTATTCTGTTTTGGTACAGCAGCTTGGGAGTTCATTaGTGGTCTGGGACTATTTGCTTGGGCACGTGTATA +
Preference number: 6 (lower is better)
Translates to: CILFWYSSLGVH*WSGTICLGTCI
Trigger: TATACACGTGCCCAAGCAAATAGTCCCAGACCAGCAATGAACTCCCAAGCTGCTGTACCAAAACAGAATACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399262.7
ENST00000402544.5
ENST00000542921.5
ENST00000639129.1
CDS CCA 72 bp ATTCTGTTTTGGTACAGCAGCTTGGGAGTTCATTGCTaGTCTGGGACTATTTGCTTGGGCACGTGTATAATG +
Preference number: 6 (lower is better)
Translates to: ILFWYSSLGVHC*SGTICLGTCIM
Trigger: CATTATACACGTGCCCAAGCAAATAGTCCCAGACCAGCAATGAACTCCCAAGCTGCTGTACCAAAACAGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399262.7
ENST00000402544.5
ENST00000542921.5
ENST00000639129.1
CDS CAA 72 bp GAGCCAGGCCTTTTTCAGTTTAGTATGGTAGTTTGGTaGACTTGTCTGGGAAGCTTGCCCATTTCCTACAGA +
Preference number: 6 (lower is better)
Translates to: EPGLFQFSMVVW*TCLGSLPISYR
Trigger: TCTGTAGGAAATGGGCAAGCTTCCCAGACAAGTCAACCAAACTACCATACTAAACTGAAAAAGGCCTGGCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000327520.7
ENST00000399262.7
ENST00000402544.5
ENST00000542921.5
ENST00000639129.1
CDS CAA 72 bp TACTTCTTTGTTGCTGTTGCTGGTGTGTATTCTGTTTaGGTACAGCAGCTTGGGAGTTCATTGCTGGTCTGG +
Preference number: 6 (lower is better)
Translates to: YFFVAVAGVYSV*VQQLGSSLLVW
Trigger: CCAGACCAGCAATGAACTCCCAAGCTGCTGTACCAAAACAGAATACACACCAGCAACAGCAACAAAGAAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399262.7
ENST00000402544.5
ENST00000542921.5
ENST00000639129.1
CDS CAA 72 bp CATCTGGTATACTGCTATCTGAGCCCTTCCTCTTATTaGGACGGATACTTCTTTGTTGCTGTTGCTGGTGTG +
Preference number: 6 (lower is better)
Translates to: HLVYCYLSPSSY*DGYFFVAVAGV
Trigger: CACACCAGCAACAGCAACAAAGAAGTATCCGTCCAAATAAGAGGAAGGGCTCAGATAGCAGTATACCAGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399262.7
ENST00000402544.5
ENST00000542921.5
ENST00000639129.1
CDS CAA 72 bp CCGCTGCTTTTCTCCACATGCCATTCAGTTTTCTCTTaGCTGAGGTTATTATTAGGTCTCCACATCTCCGTC +
Preference number: 6 (lower is better)
Translates to: PLLFSTCHSVFS*LRLLLGLHISV
Trigger: GACGGAGATGTGGAGACCTAATAATAACCTCAGCAAAGAGAAAACTGAATGGCATGTGGAGAAAAGCAGCGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399262.7
ENST00000402544.5
ENST00000542921.5
ENST00000639129.1
CDS TCA 72 bp TTATATGAAGCAGAAGGATGGGCTTGTCCAAGAAGATaGGGTGACTGGTGCTGTAACAACTGTTGTTGTTGC +
Preference number: 6 (lower is better)
Translates to: LYEAEGWACPRR*GDWCCNNCCCC
Trigger: GCAACAACAACAGTTGTTACAGCACCAGTCACCTCATCTTCTTGGACAAGCCCATCCTTCTGCTTCATATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399262.7
ENST00000402544.5
ENST00000542921.5
ENST00000639129.1
CDS TCA 72 bp TGGGTGAACCCACTTAGAAGAAGGCAAACCAAGTCCTaGGTATGCATGTGTTCCATTTGGATACTGCCAAAT +
Preference number: 6 (lower is better)
Translates to: WVNPLRRRQTKS*VCMCSIWILPN
Trigger: ATTTGGCAGTATCCAAATGGAACACATGCATACTCAGGACTTGGTTTGCCTTCTTCTAAGTGGGTTCACCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399262.7
ENST00000402544.5
ENST00000542921.5
ENST00000639129.1
CDS TCA 72 bp GCTCCCGCTGGCAAAACAATAGCATCACCAAGGAACTaGATAAGAGTACAGGTTCTGACTCCATATTCTTCA +
Preference number: 6 (lower is better)
Translates to: APAGKTIASPRN*IRVQVLTPYSS
Trigger: TGAAGAATATGGAGTCAGAACCTGTACTCTTATTCAGTTCCTTGGTGATGCTATTGTTTTGCCAGCGGGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399262.7
ENST00000402544.5
ENST00000467356.5
ENST00000542921.5
ENST00000639129.1
CDS GCA 72 bp GAGCCCTTCCTCTTATTTGGACGGATACTTCTTTGTTaGTGTTGCTGGTGTGTATTCTGTTTTGGTACAGCA +
Preference number: 6 (lower is better)
Translates to: EPFLLFGRILLC*CCWCVFCFGTA
Trigger: TGCTGTACCAAAACAGAATACACACCAGCAACAGCAACAAAGAAGTATCCGTCCAAATAAGAGGAAGGGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399262.7
ENST00000402544.5
ENST00000542921.5
ENST00000639129.1
CDS CCA 72 bp AGCAAATCCCGTAAGGTTGAGCCTTGTTCATTATTCTaGGACACAAGAGGTGATGTTCTGCCATTTGGAGAT +
Preference number: 6 (lower is better)
Translates to: SKSRKVEPCSLF*DTRGDVLPFGD
Trigger: ATCTCCAAATGGCAGAACATCACCTCTTGTGTCCCAGAATAATGAACAAGGCTCAACCTTACGGGATTTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327520.7
ENST00000399262.7
ENST00000402544.5
ENST00000497922.1
ENST00000542921.5
ENST00000639129.1
CDS CCA 72 bp CTCTTATTTGGACGGATACTTCTTTGTTGCTGTTGCTaGTGTGTATTCTGTTTTGGTACAGCAGCTTGGGAG +
Preference number: 6 (lower is better)
Translates to: LLFGRILLCCCC*CVFCFGTAAWE
Trigger: CTCCCAAGCTGCTGTACCAAAACAGAATACACACCAGCAACAGCAACAAAGAAGTATCCGTCCAAATAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399262.7
ENST00000402544.5
ENST00000542921.5
ENST00000639129.1
CDS CAA 72 bp TTTCCAGTCTGTGACCTATTTAGATCCAGGTCATTTTaGGCTGATGTGGATGCAACAGACCGTAATGGTTCC +
Preference number: 6 (lower is better)
Translates to: FPVCDLFRSRSF*ADVDATDRNGS
Trigger: GGAACCATTACGGTCTGTTGCATCCACATCAGCCAAAAATGACCTGGATCTAAATAGGTCACAGACTGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399262.7
ENST00000402544.5
ENST00000542921.5
ENST00000639129.1
CDS CAA 72 bp AATTTGCCTGGGAGTCTTTTGGTTCGGGTATTAGAGTaGGAGGCTTCTGTGATTCTTGAACTTTACCACCAG +
Preference number: 6 (lower is better)
Translates to: NLPGSLLVRVLE*EASVILELYHQ
Trigger: CTGGTGGTAAAGTTCAAGAATCACAGAAGCCTCCAACTCTAATACCCGAACCAAAAGACTCCCAGGCAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399262.7
ENST00000402544.5
ENST00000542921.5
ENST00000639129.1
CDS CAA 72 bp GCTGCCACCATTTTTCTCAGACTTCGGAGGAGTATTTaGCTGCTGAGATTGAGATACACCATTCATTGTAGG +
Preference number: 6 (lower is better)
Translates to: AATIFLRLRRSI*LLRLRYTIHCR
Trigger: CCTACAATGAATGGTGTATCTCAATCTCAGCAGCAAAATACTCCTCCGAAGTCTGAGAAAAATGGTGGCAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000402544.5
CDS CAA 90 bp CTGGAAACACTGGTAGTATCGGCAGCAGATGTGATTACATCCGTTTaGGTATTACACATCGTATTTACAGCAGACATGACTGAACTGGGA +
Preference number: 6 (lower is better)
Translates to: LETLVVSAADVITSV*VLHIVFTADMTELG
Trigger: TCCCAGTTCAGTCATGTCTGCTGTAAATACGATGTGTAATACCAAAACGGATGTAATCACATCTGCTGCCGATACTACCAGTGTTTCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327520.7
ENST00000399262.7
ENST00000402544.5
ENST00000542921.5
ENST00000639129.1
CDS CCA 72 bp GAAATGATGCTATCTTTGCAGTTCAGGAGATCAGCTTaGTGGTCTCCAAAATCAAGACTAATTGATTCCGCC +
Preference number: 6 (lower is better)
Translates to: EMMLSLQFRRSA*WSPKSRLIDSA
Trigger: GGCGGAATCAATTAGTCTTGATTTTGGAGACCACCAAGCTGATCTCCTGAACTGCAAAGATAGCATCATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327520.7
ENST00000399262.7
ENST00000402544.5
ENST00000542921.5
ENST00000639129.1
CDS CAA 72 bp CTTCCTCTTATTTGGACGGATACTTCTTTGTTGCTGTaGCTGGTGTGTATTCTGTTTTGGTACAGCAGCTTG +
Preference number: 6 (lower is better)
Translates to: LPLIWTDTSLLL*LVCILFWYSSL
Trigger: CAAGCTGCTGTACCAAAACAGAATACACACCAGCAACAGCAACAAAGAAGTATCCGTCCAAATAAGAGGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399262.7
ENST00000402544.5
ENST00000542921.5
ENST00000639129.1
CDS CAA 90 bp TCTTCTCTTCATCTGGTATACTGCTATCTGAGCCCTTCCTCTTATTaGGACGGATACTTCTTTGTTGCTGTTGCTGGTGTGTATTCTGTT +
Preference number: 6 (lower is better)
Translates to: SSLHLVYCYLSPSSY*DGYFFVAVAGVYSV
Trigger: AACAGAATACACACCAGCAACAGCAACAAAGAAGTATCCGTCCAAATAAGAGGAAGGGCTCAGATAGCAGTATACCAGATGAAGAGAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399262.7
ENST00000402544.5
ENST00000542921.5
ENST00000639129.1
CDS CAA 90 bp TGTAACTTTCCGCTGCTTTTCTCCACATGCCATTCAGTTTTCTCTTaGCTGAGGTTATTATTAGGTCTCCACATCTCCGTCAAACTCTGT +
Preference number: 6 (lower is better)
Translates to: CNFPLLFSTCHSVFS*LRLLLGLHISVKLC
Trigger: ACAGAGTTTGACGGAGATGTGGAGACCTAATAATAACCTCAGCAAAGAGAAAACTGAATGGCATGTGGAGAAAAGCAGCGGAAAGTTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399262.7
ENST00000402544.5
ENST00000542921.5
ENST00000639129.1
CDS CAA 90 bp CTGAATAAGAGTACAGGTTCTGACTCCATATTCTTCAAGCAGCCTTaGACGGAGCTTTTTGTTCACATACCAACTTTGGTCACGTATTGG +
Preference number: 6 (lower is better)
Translates to: LNKSTGSDSIFFKQP*TELFVHIPTLVTYW
Trigger: CCAATACGTGACCAAAGTTGGTATGTGAACAAAAAGCTCCGTCAAAGGCTGCTTGAAGAATATGGAGTCAGAACCTGTACTCTTATTCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000399262.7
ENST00000402544.5
ENST00000467356.5
ENST00000542921.5
ENST00000639129.1
CDS CAA 72 bp CTGGTAGTATCGGCAGCAGATGTGATTACATCCGTTTaGGTATTACACATCGTATTTACAGCAGACATGACT +
Preference number: 6 (lower is better)
Translates to: LVVSAADVITSV*VLHIVFTADMT
Trigger: AGTCATGTCTGCTGTAAATACGATGTGTAATACCAAAACGGATGTAATCACATCTGCTGCCGATACTACCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327520.7
ENST00000399262.7
ENST00000402544.5
ENST00000542921.5
ENST00000639129.1
CDS CAA 72 bp GTCTGGGAAGCTTGCCCATTTCCTACAGAGTTTGCTTaGTTAATTGTACTACAGATTACAGTGCTATCCAGA +
Preference number: 6 (lower is better)
Translates to: VWEACPFPTEFA*LIVLQITVLSR
Trigger: TCTGGATAGCACTGTAATCTGTAGTACAATTAACAAAGCAAACTCTGTAGGAAATGGGCAAGCTTCCCAGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327520.7
ENST00000399262.7
ENST00000402544.5
ENST00000542921.5
ENST00000639129.1
CDS CAA 90 bp CCATCCCAGAATTCCTTAACATTGGCATTTGAAATGATGCTATCTTaGCAGTTCAGGAGATCAGCTTGGTGGTCTCCAAAATCAAGACTA +
Preference number: 6 (lower is better)
Translates to: PSQNSLTLAFEMMLS*QFRRSAWWSPKSRL
Trigger: TAGTCTTGATTTTGGAGACCACCAAGCTGATCTCCTGAACTGCAAAGATAGCATCATTTCAAATGCCAATGTTAAGGAATTCTGGGATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327520.7
ENST00000399262.7
ENST00000402544.5
ENST00000542921.5
ENST00000639129.1
CDS TCA 72 bp CTTCAGCTTCTTGACTTTACGCCAATCTTTCAATACTaGACGAGGAATGCCAGTATTACTGTTGCTTTGCAA +
Preference number: 6 (lower is better)
Translates to: LQLLDFTPIFQY*TRNASITVALQ
Trigger: TTGCAAAGCAACAGTAATACTGGCATTCCTCGTTCAGTATTGAAAGATTGGCGTAAAGTCAAGAAGCTGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399262.7
ENST00000542921.5
ENST00000639129.1
CDS GCA 72 bp CTTGTTCATTATTCTGGGACACAAGAGGTGATGTTCTaGCATTTGGAGATTCAGAGTTGTCTTGTTCTCTTT +
Preference number: 6 (lower is better)
Translates to: LVHYSGTQEVMF*HLEIQSCLVLF
Trigger: AAAGAGAACAAGACAACTCTGAATCTCCAAATGGCAGAACATCACCTCTTGTGTCCCAGAATAATGAACAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327520.7
ENST00000399262.7
ENST00000402544.5
ENST00000497922.1
ENST00000542921.5
ENST00000639129.1
CDS TCA 72 bp GCAACTTCAGTTTACTTCTTTCTTTGGCACTCCTGCTaGGAACTCCATTGGGTTTCAAATCTTCTTCTATTT +
Preference number: 6 (lower is better)
Translates to: ATSVYFFLWHSC*ELHWVSNLLLF
Trigger: AAATAGAAGAAGATTTGAAACCCAATGGAGTTCTCAGCAGGAGTGCCAAAGAAAGAAGTAAACTGAAGTTGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327520.7
ENST00000399262.7
ENST00000402544.5
ENST00000542921.5
ENST00000639129.1
CDS TCA 72 bp CAGTTGCTTATCTACAAGGAATTCTACTGCAGTGACTaGACTGGGTATATTTCTTTCAACCAGAGGTTTGAA +
Preference number: 6 (lower is better)
Translates to: QLLIYKEFYCSD*TGYISFNQRFE
Trigger: TTCAAACCTCTGGTTGAAAGAAATATACCCAGTTCAGTCACTGCAGTAGAATTCCTTGTAGATAAGCAACTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000399262.7
ENST00000469152.5
ENST00000489372.4
ENST00000542921.5
ENST00000633035.1
CDS TCA 72 bp AATCCAGTTGCTTATCTACAAGGAATTCTACTGCAGTaGCTGAACTGGGTATATTTCTTTCAACCAGAGGTT +
Preference number: 6 (lower is better)
Translates to: NPVAYLQGILLQ*LNWVYFFQPEV
Trigger: AACCTCTGGTTGAAAGAAATATACCCAGTTCAGTCACTGCAGTAGAATTCCTTGTAGATAAGCAACTGGATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000399262.7
ENST00000469152.5
ENST00000489372.4
ENST00000542921.5
ENST00000633035.1
CDS GCA 72 bp TTAGATTTTATAGTCTCTGGAGGTGGACTTCGCTTATaGAGCTTATCTTCCATGACAGAAACTGCACTTAAA +
Preference number: 6 (lower is better)
Translates to: LDFIVSGGGLRL*SLSSMTETALK
Trigger: TTTAAGTGCAGTTTCTGTCATGGAAGATAAGCTGCATAAGCGAAGTCCACCTCCAGAGACTATAAAATCTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399262.7
ENST00000402544.5
ENST00000542921.5
ENST00000639129.1
CDS CAA 72 bp TTTAGTATGGTAGTTTGGTTGACTTGTCTGGGAAGCTaGCCCATTTCCTACAGAGTTTGCTTTGTTAATTGT +
Preference number: 6 (lower is better)
Translates to: FSMVVWLTCLGS*PISYRVCFVNC
Trigger: ACAATTAACAAAGCAAACTCTGTAGGAAATGGGCAAGCTTCCCAGACAAGTCAACCAAACTACCATACTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327520.7
ENST00000399262.7
ENST00000402544.5
ENST00000542921.5
ENST00000639129.1
CDS CAA 72 bp TGCTCTTTTCCAGGCAATTTTGGTATTACTGTTGCTTaGCAACTTCAGTTTACTTCTTTCTTTGGCACTCCT +
Preference number: 6 (lower is better)
Translates to: CSFPGNFGITVA*QLQFTSFFGTP
Trigger: AGGAGTGCCAAAGAAAGAAGTAAACTGAAGTTGCAAAGCAACAGTAATACCAAAATTGCCTGGAAAAGAGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327520.7
CDS CAA 72 bp AATTCCTTAACATTGGCATTTGAAATGATGCTATCTTaGCAGTTCAGGAGATCAGCTTGGTGGTCTCCAAAA +
Preference number: 6 (lower is better)
Translates to: NSLTLAFEMMLS*QFRRSAWWSPK
Trigger: TTTTGGAGACCACCAAGCTGATCTCCTGAACTGCAAAGATAGCATCATTTCAAATGCCAATGTTAAGGAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327520.7
ENST00000399262.7
ENST00000402544.5
ENST00000542921.5
ENST00000639129.1
CDS CAA 72 bp ATTTTGGTGTGGGTGGTCTGGATACAAACTTCTCCTTaGGTAGCAATTCCATGGTATGTGTTTTATCCATAT +
Preference number: 6 (lower is better)
Translates to: ILVWVVWIQTSP*VAIPWYVFYPY
Trigger: ATATGGATAAAACACATACCATGGAATTGCTACCAAAGGAGAAGTTTGTATCCAGACCACCCACACCAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000399262.7
ENST00000402544.5
ENST00000542921.5
ENST00000639129.1
CDS CAA 72 bp CTGCAAGGGCATTACTCTGTTTATCACCGTAAATATTaGAAACTTCTTTGGATGGGTATGATCTTGGTGGTT +
Preference number: 6 (lower is better)
Translates to: LQGHYSVYHRKY*KLLWMGMILVV
Trigger: AACCACCAAGATCATACCCATCCAAAGAAGTTTCAAATATTTACGGTGATAAACAGAGTAATGCCCTTGCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399262.7
ENST00000402544.5
ENST00000542921.5
ENST00000639129.1
CDS GCA 72 bp CAATGGGATTTAATACCATATTTTTCCCTAAGAGTGTaGATGGCATCTAGAAGATCTGTCAAAACAGAACCA +
Preference number: 6 (lower is better)
Translates to: QWDLIPYFSLRV*MASRRSVKTEP
Trigger: TGGTTCTGTTTTGACAGATCTTCTAGATGCCATGCACACTCTTAGGGAAAAATATGGTATTAAATCCCATTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000327520.7
ENST00000399262.7
ENST00000402544.5
ENST00000483298.1
ENST00000542921.5
ENST00000639129.1
CDS CAA 72 bp AGATCTGATACTGAGCGTTCTACATCCATATCTTGTTaGATGATATGGCTTTTAGGACTGGAAGATGATGAT +
Preference number: 6 (lower is better)
Translates to: RSDTERSTSISC*MIWLLGLEDDD
Trigger: ATCATCATCTTCCAGTCCTAAAAGCCATATCATCAAACAAGATATGGATGTAGAACGCTCAGTATCAGATCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399262.7
ENST00000402544.5
ENST00000542921.5
ENST00000639129.1
CDS TCA 72 bp ATTTCTTCCTTCAAAAGTCTCAGTTCCTGTGTTAAATaGAATGACTCTACAAGATGTTCTGGAGACACAAAA +
Preference number: 6 (lower is better)
Translates to: ISSFKSLSSCVK*NDSTRCSGDTK
Trigger: TTTTGTGTCTCCAGAACATCTTGTAGAGTCATTTCATTTAACACAGGAACTGAGACTTTTGAAGGAAGAAAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399262.7
ENST00000402544.5
ENST00000467356.5
ENST00000542921.5
ENST00000639129.1
CDS GCA 72 bp CAATGGGATTTAATACCATATTTTTCCCTAAGAGTGTaGATGGCATCTAGAAGATCTGTCAAAACTACAAAA +
Preference number: 6 (lower is better)
Translates to: QWDLIPYFSLRV*MASRRSVKTTK
Trigger: TTTTGTAGTTTTGACAGATCTTCTAGATGCCATGCACACTCTTAGGGAAAAATATGGTATTAAATCCCATTG
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000490669.1