Pregenerated sensors for JKAMP (Homo sapiens)
Ensembl gene IDs: ENSG00000050130Ensembl transcript IDs: ENST00000356057.9, ENST00000425728.6, ENST00000553156.2, ENST00000553647.1, ENST00000554271.5, ENST00000555491.5, ENST00000616435.5
Found 107 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGGTTAAGAGCTAAAAATTTCATTTTGCTTCCATGGTTGCAACCATaGGTCTTAAGGCCTTCAAAGCATAAACATCACAGAACACCTATC | + |
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Preference number: 1 (lower is better) Translates to: RLRAKNFILLPWLQP*VLRPSKHKHHRTPI Trigger: GATAGGTGTTCTGTGATGTTTATGCTTTGAAGGCCTTAAGACTCATGGTTGCAACCATGGAAGCAAAATGAAATTTTTAGCTCTTAACCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000356057.9 ENST00000616435.5 |
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| 3UTR-3UTR TCA 90 bp | GAAACACAACAGGTAAGTACAATTACGCCACTGTTAAGGACTGCAGATTACACGGAACAGCTGAACTGTTaGGAGAAGCAAGGGCTTCCT | + |
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Preference number: 2 (lower is better) Translates to: ETQQVSTITPLLRTADYTEQLNC*EKQGLP Trigger: AGGAAGCCCTTGCTTCTCTCAACAGTTCAGCTGTTC...CGTGTAATCTGCAGTCCTTAACAGTGGCGTAATTGTACTTACCTGTTGTGTTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000356057.9 ENST00000425728.6 ENST00000554271.5 ENST00000616435.5 |
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| 3UTR-3UTR TCA 90 bp | AACACAACAGGTAAGTACAATTACGCCACTGTTAAGGACTGCAGATTACACGTGGAACAGCTGAACTGTTaGGAGAAGCAAGGGCTTCCT | + |
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Preference number: 2 (lower is better) Translates to: NTTGKYNYATVKDCRLHVEQLNC*EKQGLP Trigger: AGGAAGCCCTTGCTTCTCTCAACAGTTCAGCTGTTC...CACGTGTAATCTGCAGTCCTTAACAGTGGCGTAATTGTACTTACCTGTTGTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000356057.9 ENST00000425728.6 ENST00000554271.5 ENST00000616435.5 |
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| 3UTR-3UTR TCA 90 bp | CAAACTGAAACACAACAGGTAAGTACAATTACGCCACTGTTAAGGACTGCAGATGAACAGCTGAACTGTTaGGAGAAGCAAGGGCTTCCT | + |
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Preference number: 2 (lower is better) Translates to: QTETQQVSTITPLLRTADEQLNC*EKQGLP Trigger: AGGAAGCCCTTGCTTCTCTCAACAGTTCAGCTGTTC...ATCTGCAGTCCTTAACAGTGGCGTAATTGTACTTACCTGTTGTGTTTCAGTTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000356057.9 ENST00000425728.6 ENST00000554271.5 ENST00000616435.5 |
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| 3UTR-3UTR TCA 90 bp | AAGAAACACATTCGTACAAGGGTTCATTTCCCAGTGGTTAAATGTACTGAGAAACCATGGTTGCAACCATaGGTCTTAAGGCCTTCAAAG | + |
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Preference number: 2 (lower is better) Translates to: KKHIRTRVHFPVVKCTEKPWLQP*VLRPSK Trigger: CTTTGAAGGCCTTAAGACTCATGGTTGCAACCATGG...TTTCTCAGTACATTTAACCACTGGGAAATGAACCCTTGTACGAATGTGTTTCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000356057.9 ENST00000616435.5 |
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| 3UTR-3UTR GCA 90 bp | AAGAAACACATTCGTACAAGGGTTCATTTCCCAGTGGTTAAATGTACTGAGAAAGCCACTGTTAAGGACTaGAGATTACACGTGTTAAAG | + |
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Preference number: 2 (lower is better) Translates to: KKHIRTRVHFPVVKCTEKATVKD*RLHVLK Trigger: CTTTAACACGTGTAATCTGCAGTCCTTAACAGTGGC...TTTCTCAGTACATTTAACCACTGGGAAATGAACCCTTGTACGAATGTGTTTCTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000356057.9 ENST00000616435.5 |
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| 3UTR-3UTR TCA 90 bp | AAGAAACACATTCGTACAAGGGTTCATTTCCCAGTGGTTAAATGTACTGAGAAATATATACCCGAGATATaGGAGGAAACTATTTACCAG | + |
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Preference number: 2 (lower is better) Translates to: KKHIRTRVHFPVVKCTEKYIPEI*EETIYQ Trigger: CTGGTAAATAGTTTCCTCTCATATCTCGGGTATATA...TTTCTCAGTACATTTAACCACTGGGAAATGAACCCTTGTACGAATGTGTTTCTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000356057.9 ENST00000616435.5 |
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| 3UTR-3UTR GCA 90 bp | ACAAACCACAAACCAACCACAGGAAAACCCTTTTTATTCTGTGTATCTTCTGTACATCATTTCTATGTTTaGTATCAGACCCCACAAGTA | + |
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Preference number: 2 (lower is better) Translates to: TNHKPTTGKPFLFCVSSVHHFYV*YQTPQV Trigger: TACTTGTGGGGTCTGATAGCAAACATAGAAATGATG...TACAGAAGATACACAGAATAAAAAGGGTTTTCCTGTGGTTGGTTTGTGGTTTGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000356057.9 ENST00000616435.5 |
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| 3UTR-3UTR TCA 90 bp | AAGATGCATCCTAATTCAGAGATGTCACAAAGTGAAATAAGTATCTCTGGATCATATATACCCGAGATATaGGAGGAAACTATTTACCAG | + |
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Preference number: 2 (lower is better) Translates to: KMHPNSEMSQSEISISGSYIPEI*EETIYQ Trigger: CTGGTAAATAGTTTCCTCTCATATCTCGGGTATATA...TGATCCAGAGATACTTATTTCACTTTGTGACATCTCTGAATTAGGATGCATCTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000356057.9 ENST00000616435.5 |
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| 3UTR-3UTR GCA 90 bp | AAGATGCATCCTAATTCAGAGATGTCACAAAGTGAAATAAGTATCTCTGGATCACATCATTTCTATGTTTaGTATCAGACCCCACAAGTA | + |
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Preference number: 2 (lower is better) Translates to: KMHPNSEMSQSEISISGSHHFYV*YQTPQV Trigger: TACTTGTGGGGTCTGATAGCAAACATAGAAATGATG...TGATCCAGAGATACTTATTTCACTTTGTGACATCTCTGAATTAGGATGCATCTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000356057.9 ENST00000616435.5 |
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| 3UTR-3UTR CAA 90 bp | GAAACACAACAGGTAAGTACAATTACGCCACTGTTAAGGACTGCAGATTACACGAGAACAGCTGAACTGTaGAGAGAAGCAAGGGCTTCC | + |
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Preference number: 3 (lower is better) Translates to: ETQQVSTITPLLRTADYTRTAEL*REARAS Trigger: GGAAGCCCTTGCTTCTCTCAACAGTTCAGCTGTTCT...CGTGTAATCTGCAGTCCTTAACAGTGGCGTAATTGTACTTACCTGTTGTGTTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000356057.9 ENST00000425728.6 ENST00000554271.5 ENST00000616435.5 |
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| 3UTR-3UTR CAA 90 bp | AACACAACAGGTAAGTACAATTACGCCACTGTTAAGGACTGCAGATTACACGTGAGAACAGCTGAACTGTaGAGAGAAGCAAGGGCTTCC | + |
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Preference number: 3 (lower is better) Translates to: NTTGKYNYATVKDCRLHVRTAEL*REARAS Trigger: GGAAGCCCTTGCTTCTCTCAACAGTTCAGCTGTTCT...CACGTGTAATCTGCAGTCCTTAACAGTGGCGTAATTGTACTTACCTGTTGTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000356057.9 ENST00000425728.6 ENST00000554271.5 ENST00000616435.5 |
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| 3UTR-3UTR CAA 90 bp | CAAACTGAAACACAACAGGTAAGTACAATTACGCCACTGTTAAGGACTGCAGATAGAACAGCTGAACTGTaGAGAGAAGCAAGGGCTTCC | + |
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Preference number: 3 (lower is better) Translates to: QTETQQVSTITPLLRTADRTAEL*REARAS Trigger: GGAAGCCCTTGCTTCTCTCAACAGTTCAGCTGTTCT...ATCTGCAGTCCTTAACAGTGGCGTAATTGTACTTACCTGTTGTGTTTCAGTTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000356057.9 ENST00000425728.6 ENST00000554271.5 ENST00000616435.5 |
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| CDS-3UTR GCA 90 bp | AACACAACAGGTAAGTACAATTACGCCACTGTTAAGGACTGCAGATTACACGTGGTCAAGGGGCGAGCCTaGGCCGCCAACCGAAGGCCG | + |
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Preference number: 4 (lower is better) Translates to: NTTGKYNYATVKDCRLHVVKGRA*AANRRP Trigger: CGGCCTTCGGTTGGCGGCGCAGGCTCGCCCCTTGAC...CACGTGTAATCTGCAGTCCTTAACAGTGGCGTAATTGTACTTACCTGTTGTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000554271.5 |
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| CDS-3UTR CCA 90 bp | GAAACACAACAGGTAAGTACAATTACGCCACTGTTAAGGACTGCAGATTACACGCGCTTCCCGGGATCTTaGCGACCACTCACCCATGGG | + |
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Preference number: 4 (lower is better) Translates to: ETQQVSTITPLLRTADYTRFPGS*RPLTHG Trigger: CCCATGGGTGAGTGGTCGCCAAGATCCCGGGAAGCG...CGTGTAATCTGCAGTCCTTAACAGTGGCGTAATTGTACTTACCTGTTGTGTTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000554271.5 |
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| CDS-3UTR GCA 90 bp | CAAACTGAAACACAACAGGTAAGTACAATTACGCCACTGTTAAGGACTGCAGATAGCGGATCTGGCAGCTaGACCGAACATCCGGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: QTETQQVSTITPLLRTADSGSGS*TEHPGH Trigger: GTGGCCCGGATGTTCGGTGCAGCTGCCAGATCCGCT...ATCTGCAGTCCTTAACAGTGGCGTAATTGTACTTACCTGTTGTGTTTCAGTTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000356057.9 ENST00000425728.6 ENST00000616435.5 |
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| CDS-3UTR GCA 90 bp | CAAACTGAAACACAACAGGTAAGTACAATTACGCCACTGTTAAGGACTGCAGATCCCCTAGTAGCCCGTTaGGGACAGACCACCCCAACC | + |
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Preference number: 4 (lower is better) Translates to: QTETQQVSTITPLLRTADPLVAR*GQTTPT Trigger: GGTTGGGGTGGTCTGTCCGCAACGGGCTACTAGGGG...ATCTGCAGTCCTTAACAGTGGCGTAATTGTACTTACCTGTTGTGTTTCAGTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000554271.5 |
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| CDS-3UTR TCA 90 bp | CTCCACCAACTGCCTGAAGCACGGTTAAAATTGGGAAGAAGTAAAGTGCAGCATCCTCCACCAACTGCCTaGAGCACGGTTAAAATTGGG | + |
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Preference number: 4 (lower is better) Translates to: LHQLPEARLKLGRSKVQHPPPTA*STVKIG Trigger: CCCAATTTTAACCGTGCTTCAGGCAGTTGGTGGAGG...ATGCTGCACTTTACTTCTTCCCAATTTTAACCGTGCTTCAGGCAGTTGGTGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000555491.5 |
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| CDS-3UTR TCA 90 bp | CACCAACTGCCTGAAGCACGGTTAAAATTGGGAAGAAGTAAAGTGCAGCATAAACCAAGGCATGCTGGTTaGATATCGACAGCCATGGGC | + |
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Preference number: 4 (lower is better) Translates to: HQLPEARLKLGRSKVQHKPRHAG*ISTAMG Trigger: GCCCATGGCTGTCGATATTCAACCAGCATGCCTTGG...TTTATGCTGCACTTTACTTCTTCCCAATTTTAACCGTGCTTCAGGCAGTTGGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555491.5 |
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| CDS-3UTR GCA 90 bp | AAGAAACACATTCGTACAAGGGTTCATTTCCCAGTGGTTAAATGTACTGAGAAAAGCGGATCTGGCAGCTaGACCGAACATCCGGGCCAC | + |
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Preference number: 4 (lower is better) Translates to: KKHIRTRVHFPVVKCTEKSGSGS*TEHPGH Trigger: GTGGCCCGGATGTTCGGTGCAGCTGCCAGATCCGCT...TTTCTCAGTACATTTAACCACTGGGAAATGAACCCTTGTACGAATGTGTTTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000356057.9 ENST00000616435.5 |
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| CDS-3UTR CCA 90 bp | GAAACACAACAGGTAAGTACAATTACGCCACTGTTAAGGACTGCAGATTACACGCTAGATCAGCGGATCTaGCAGCTGCACCGAACATCC | + |
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Preference number: 4 (lower is better) Translates to: ETQQVSTITPLLRTADYTLDQRI*QLHRTS Trigger: GGATGTTCGGTGCAGCTGCCAGATCCGCTGATCTAG...CGTGTAATCTGCAGTCCTTAACAGTGGCGTAATTGTACTTACCTGTTGTGTTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000356057.9 ENST00000425728.6 ENST00000616435.5 |
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| CDS-3UTR TCA 90 bp | AACACAACAGGTAAGTACAATTACGCCACTGTTAAGGACTGCAGATTACACGTGCCTCCACCAACTGCCTaGAGCACGGTTAAAATTGGG | + |
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Preference number: 4 (lower is better) Translates to: NTTGKYNYATVKDCRLHVPPPTA*STVKIG Trigger: CCCAATTTTAACCGTGCTTCAGGCAGTTGGTGGAGG...CACGTGTAATCTGCAGTCCTTAACAGTGGCGTAATTGTACTTACCTGTTGTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000356057.9 ENST00000425728.6 ENST00000554271.5 ENST00000616435.5 |
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| CDS-3UTR CCA 90 bp | CAAACTGAAACACAACAGGTAAGTACAATTACGCCACTGTTAAGGACTGCAGATCTAGATCAGCGGATCTaGCAGCTGCACCGAACATCC | + |
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Preference number: 4 (lower is better) Translates to: QTETQQVSTITPLLRTADLDQRI*QLHRTS Trigger: GGATGTTCGGTGCAGCTGCCAGATCCGCTGATCTAG...ATCTGCAGTCCTTAACAGTGGCGTAATTGTACTTACCTGTTGTGTTTCAGTTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000356057.9 ENST00000425728.6 ENST00000616435.5 |
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| CDS-3UTR TCA 90 bp | CAAACTGAAACACAACAGGTAAGTACAATTACGCCACTGTTAAGGACTGCAGATCCTCCACCAACTGCCTaGAGCACGGTTAAAATTGGG | + |
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Preference number: 4 (lower is better) Translates to: QTETQQVSTITPLLRTADPPPTA*STVKIG Trigger: CCCAATTTTAACCGTGCTTCAGGCAGTTGGTGGAGG...ATCTGCAGTCCTTAACAGTGGCGTAATTGTACTTACCTGTTGTGTTTCAGTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000356057.9 ENST00000425728.6 ENST00000554271.5 ENST00000616435.5 |
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| CDS-3UTR CCA 90 bp | CAAACTGAAACACAACAGGTAAGTACAATTACGCCACTGTTAAGGACTGCAGATCGTTCTCTGTCCTCTTaGGCATACCCCACATTCTCC | + |
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Preference number: 4 (lower is better) Translates to: QTETQQVSTITPLLRTADRSLSS*AYPTFS Trigger: GGAGAATGTGGGGTATGCCCAAGAGGACAGAGAACG...ATCTGCAGTCCTTAACAGTGGCGTAATTGTACTTACCTGTTGTGTTTCAGTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000356057.9 ENST00000425728.6 ENST00000554271.5 ENST00000616435.5 |
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| CDS-3UTR CCA 90 bp | CTCCACCAACTGCCTGAAGCACGGTTAAAATTGGGAAGAAGTAAAGTGCAGCATAATGCAGTGATGTGTTaGAAAAGTGCGCTGGAACTC | + |
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Preference number: 4 (lower is better) Translates to: LHQLPEARLKLGRSKVQHNAVMC*KSALEL Trigger: GAGTTCCAGCGCACTTTTCCAACACATCACTGCATT...ATGCTGCACTTTACTTCTTCCCAATTTTAACCGTGCTTCAGGCAGTTGGTGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000555491.5 |
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| CDS-3UTR CCA 90 bp | GAAACACAACAGGTAAGTACAATTACGCCACTGTTAAGGACTGCAGATTACACGCAAACAACAAAGACCTaGCATTTCGCCGCAGACAGC | + |
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Preference number: 4 (lower is better) Translates to: ETQQVSTITPLLRTADYTQTTKT*HFAADS Trigger: GCTGTCTGCGGCGAAATGCCAGGTCTTTGTTGTTTG...CGTGTAATCTGCAGTCCTTAACAGTGGCGTAATTGTACTTACCTGTTGTGTTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000554271.5 |
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| CDS-3UTR CCA 90 bp | CTCCACCAACTGCCTGAAGCACGGTTAAAATTGGGAAGAAGTAAAGTGCAGCATAAGTCCAAGGCATGCTaGTTGAATATCGACAGCCAT | + |
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Preference number: 4 (lower is better) Translates to: LHQLPEARLKLGRSKVQHKSKAC*LNIDSH Trigger: ATGGCTGTCGATATTCAACCAGCATGCCTTGGACTT...ATGCTGCACTTTACTTCTTCCCAATTTTAACCGTGCTTCAGGCAGTTGGTGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555491.5 |
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| CDS-3UTR TCA 90 bp | ACAAACCACAAACCAACCACAGGAAAACCCTTTTTATTCTGTGTATCTTCTGTACCAAGGCATGCTGGTTaGATATCGACAGCCATGGGC | + |
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Preference number: 4 (lower is better) Translates to: TNHKPTTGKPFLFCVSSVPRHAG*ISTAMG Trigger: GCCCATGGCTGTCGATATTCAACCAGCATGCCTTGG...TACAGAAGATACACAGAATAAAAAGGGTTTTCCTGTGGTTGGTTTGTGGTTTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000616435.5 |
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| CDS-3UTR TCA 90 bp | GAAACACAACAGGTAAGTACAATTACGCCACTGTTAAGGACTGCAGATTACACGGCTCCAAGCGACTGTTaGATTTCTCCTTTCATTTCC | + |
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Preference number: 4 (lower is better) Translates to: ETQQVSTITPLLRTADYTAPSDC*ISPFIS Trigger: GGAAATGAAAGGAGAAATTCAACAGTCGCTTGGAGC...CGTGTAATCTGCAGTCCTTAACAGTGGCGTAATTGTACTTACCTGTTGTGTTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000356057.9 ENST00000554271.5 |
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| CDS-3UTR TCA 90 bp | CTCCACCAACTGCCTGAAGCACGGTTAAAATTGGGAAGAAGTAAAGTGCAGCATCCGAGTACCATTCAATaGAGAACCAATGTAAAACCA | + |
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Preference number: 4 (lower is better) Translates to: LHQLPEARLKLGRSKVQHPSTIQ*RTNVKP Trigger: TGGTTTTACATTGGTTCTTCATTGAATGGTACTCGG...ATGCTGCACTTTACTTCTTCCCAATTTTAACCGTGCTTCAGGCAGTTGGTGGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000555491.5 |
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| CDS-3UTR TCA 90 bp | ACAAACCACAAACCAACCACAGGAAAACCCTTTTTATTCTGTGTATCTTCTGTACCTCCACCAACTGCCTaGAGCACGGTTAAAATTGGG | + |
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Preference number: 4 (lower is better) Translates to: TNHKPTTGKPFLFCVSSVPPPTA*STVKIG Trigger: CCCAATTTTAACCGTGCTTCAGGCAGTTGGTGGAGG...TACAGAAGATACACAGAATAAAAAGGGTTTTCCTGTGGTTGGTTTGTGGTTTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000356057.9 ENST00000616435.5 |
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| CDS-3UTR TCA 90 bp | AAGAAACACATTCGTACAAGGGTTCATTTCCCAGTGGTTAAATGTACTGAGAAACCTCCACCAACTGCCTaGAGCACGGTTAAAATTGGG | + |
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Preference number: 4 (lower is better) Translates to: KKHIRTRVHFPVVKCTEKPPPTA*STVKIG Trigger: CCCAATTTTAACCGTGCTTCAGGCAGTTGGTGGAGG...TTTCTCAGTACATTTAACCACTGGGAAATGAACCCTTGTACGAATGTGTTTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000356057.9 ENST00000616435.5 |
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| CDS-3UTR TCA 90 bp | AACACAACAGGTAAGTACAATTACGCCACTGTTAAGGACTGCAGATTACACGTGCCAAGGCATGCTGGTTaGATATCGACAGTAAGCAAA | + |
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Preference number: 4 (lower is better) Translates to: NTTGKYNYATVKDCRLHVPRHAG*ISTVSK Trigger: TTTGCTTACTGTCGATATTCAACCAGCATGCCTTGG...CACGTGTAATCTGCAGTCCTTAACAGTGGCGTAATTGTACTTACCTGTTGTGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000554271.5 |
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| CDS-3UTR GCA 90 bp | CTCCACCAACTGCCTGAAGCACGGTTAAAATTGGGAAGAAGTAAAGTGCAGCATAACCAGAGGAAGCATTaGCATAAATCCAAGATAGAG | + |
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Preference number: 4 (lower is better) Translates to: LHQLPEARLKLGRSKVQHNQRKH*HKSKIE Trigger: CTCTATCTTGGATTTATGGCAATGCTTCCTCTGGTT...ATGCTGCACTTTACTTCTTCCCAATTTTAACCGTGCTTCAGGCAGTTGGTGGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555491.5 |
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| CDS-3UTR CCA 90 bp | AACACATTCGTACAAGGGTTCATTTCCCAGTGGTTAAATGTACTGAGAAAAATACTAGATCAGCGGATCTaGCAGCTGCACCGAACATCC | + |
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Preference number: 4 (lower is better) Translates to: NTFVQGFISQWLNVLRKILDQRI*QLHRTS Trigger: GGATGTTCGGTGCAGCTGCCAGATCCGCTGATCTAG...TATTTTTCTCAGTACATTTAACCACTGGGAAATGAACCCTTGTACGAATGTGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000356057.9 ENST00000616435.5 |
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| CDS-3UTR CCA 90 bp | AAGAAACACATTCGTACAAGGGTTCATTTCCCAGTGGTTAAATGTACTGAGAAACGTTCTCTGTCCTCTTaGGCATACCCCACATTCTCC | + |
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Preference number: 4 (lower is better) Translates to: KKHIRTRVHFPVVKCTEKRSLSS*AYPTFS Trigger: GGAGAATGTGGGGTATGCCCAAGAGGACAGAGAACG...TTTCTCAGTACATTTAACCACTGGGAAATGAACCCTTGTACGAATGTGTTTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000356057.9 ENST00000616435.5 |
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| CDS-3UTR TCA 90 bp | AACACAACAGGTAAGTACAATTACGCCACTGTTAAGGACTGCAGATTACACGTGGATTCTGTGCAAGGCTaGCAATATTTCTGTGCATTC | + |
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Preference number: 4 (lower is better) Translates to: NTTGKYNYATVKDCRLHVDSVQG*QYFCAF Trigger: GAATGCACAGAAATATTGTCAGCCTTGCACAGAATC...CACGTGTAATCTGCAGTCCTTAACAGTGGCGTAATTGTACTTACCTGTTGTGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000356057.9 ENST00000425728.6 ENST00000554271.5 ENST00000616435.5 |
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| CDS-3UTR TCA 90 bp | GAAACACAACAGGTAAGTACAATTACGCCACTGTTAAGGACTGCAGATTACACGGATTCTGTGCAAGGCTaGCAATATTTCTGTGCATTC | + |
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Preference number: 4 (lower is better) Translates to: ETQQVSTITPLLRTADYTDSVQG*QYFCAF Trigger: GAATGCACAGAAATATTGTCAGCCTTGCACAGAATC...CGTGTAATCTGCAGTCCTTAACAGTGGCGTAATTGTACTTACCTGTTGTGTTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000356057.9 ENST00000425728.6 ENST00000554271.5 ENST00000616435.5 |
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| CDS-3UTR TCA 90 bp | ACAAACCACAAACCAACCACAGGAAAACCCTTTTTATTCTGTGTATCTTCTGTAGAACAGCTGAACTGTTaGGAGAAGCAAGGGCTTCCT | + |
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Preference number: 4 (lower is better) Translates to: TNHKPTTGKPFLFCVSSVEQLNC*EKQGLP Trigger: AGGAAGCCCTTGCTTCTCTCAACAGTTCAGCTGTTC...TACAGAAGATACACAGAATAAAAAGGGTTTTCCTGTGGTTGGTTTGTGGTTTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000356057.9 ENST00000616435.5 |
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| CDS-3UTR GCA 90 bp | GAAACACAACAGGTAAGTACAATTACGCCACTGTTAAGGACTGCAGATTACACGGCCACTGTTAAGGACTaGAGATTACACGTGTTAAAG | + |
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Preference number: 4 (lower is better) Translates to: ETQQVSTITPLLRTADYTATVKD*RLHVLK Trigger: CTTTAACACGTGTAATCTGCAGTCCTTAACAGTGGC...CGTGTAATCTGCAGTCCTTAACAGTGGCGTAATTGTACTTACCTGTTGTGTTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000356057.9 ENST00000425728.6 ENST00000554271.5 ENST00000616435.5 |
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| CDS-3UTR GCA 90 bp | AACACAACAGGTAAGTACAATTACGCCACTGTTAAGGACTGCAGATTACACGTGGCCACTGTTAAGGACTaGAGATTACACGTGTTAAAG | + |
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Preference number: 4 (lower is better) Translates to: NTTGKYNYATVKDCRLHVATVKD*RLHVLK Trigger: CTTTAACACGTGTAATCTGCAGTCCTTAACAGTGGC...CACGTGTAATCTGCAGTCCTTAACAGTGGCGTAATTGTACTTACCTGTTGTGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000356057.9 ENST00000425728.6 ENST00000554271.5 ENST00000616435.5 |
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| CDS-3UTR GCA 90 bp | CACCAACTGCCTGAAGCACGGTTAAAATTGGGAAGAAGTAAAGTGCAGCATAAAATAAAGTCCAAGGCATaGTGGTTGAATATCGACAGC | + |
|
Preference number: 4 (lower is better) Translates to: HQLPEARLKLGRSKVQHKIKSKA*WLNIDS Trigger: GCTGTCGATATTCAACCAGCATGCCTTGGACTTTAT...TTTATGCTGCACTTTACTTCTTCCCAATTTTAACCGTGCTTCAGGCAGTTGGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000555491.5 |
||
| CDS-3UTR GCA 90 bp | AACACAACAGGTAAGTACAATTACGCCACTGTTAAGGACTGCAGATTACACGTGATAAAGTCCAAGGCATaGTGGTTGAATATCGACAGC | + |
|
Preference number: 4 (lower is better) Translates to: NTTGKYNYATVKDCRLHVIKSKA*WLNIDS Trigger: GCTGTCGATATTCAACCAGCATGCCTTGGACTTTAT...CACGTGTAATCTGCAGTCCTTAACAGTGGCGTAATTGTACTTACCTGTTGTGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000616435.5 |
||
| CDS-3UTR CCA 90 bp | CAAACTGAAACACAACAGGTAAGTACAATTACGCCACTGTTAAGGACTGCAGATAATGCAGTGATGTGTTaGAAAAGTGCGCTGGAACTC | + |
|
Preference number: 4 (lower is better) Translates to: QTETQQVSTITPLLRTADNAVMC*KSALEL Trigger: GAGTTCCAGCGCACTTTTCCAACACATCACTGCATT...ATCTGCAGTCCTTAACAGTGGCGTAATTGTACTTACCTGTTGTGTTTCAGTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000356057.9 ENST00000425728.6 ENST00000554271.5 ENST00000616435.5 |
||
| CDS-3UTR CCA 90 bp | GAAACACAACAGGTAAGTACAATTACGCCACTGTTAAGGACTGCAGATTACACGAAGTCCAAGGCATGCTaGTTGAATATCGACAGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: ETQQVSTITPLLRTADYTKSKAC*LNIDSK Trigger: CTTACTGTCGATATTCAACCAGCATGCCTTGGACTT...CGTGTAATCTGCAGTCCTTAACAGTGGCGTAATTGTACTTACCTGTTGTGTTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000554271.5 |
||
| CDS-3UTR TCA 90 bp | CAACTGCCTGAAGCACGGTTAAAATTGGGAAGAAGTAAAGTGCAGCATAAATACGATTCTGTGCAAGGCTaGCAATATTTCTGTGCATTC | + |
|
Preference number: 4 (lower is better) Translates to: QLPEARLKLGRSKVQHKYDSVQG*QYFCAF Trigger: GAATGCACAGAAATATTGTCAGCCTTGCACAGAATC...GTATTTATGCTGCACTTTACTTCTTCCCAATTTTAACCGTGCTTCAGGCAGTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555491.5 |
||
| CDS-3UTR TCA 90 bp | AACACAACAGGTAAGTACAATTACGCCACTGTTAAGGACTGCAGATTACACGTGCCGAGTACCATTCAATaGAGAACCAATGTAAAACCA | + |
|
Preference number: 4 (lower is better) Translates to: NTTGKYNYATVKDCRLHVPSTIQ*RTNVKP Trigger: TGGTTTTACATTGGTTCTTCATTGAATGGTACTCGG...CACGTGTAATCTGCAGTCCTTAACAGTGGCGTAATTGTACTTACCTGTTGTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000356057.9 ENST00000425728.6 ENST00000554271.5 ENST00000616435.5 |
||
| CDS-3UTR TCA 90 bp | GAAACACAACAGGTAAGTACAATTACGCCACTGTTAAGGACTGCAGATTACACGAGGATACAACTGCTGTaGATTCAAAAGACAGACTAC | + |
|
Preference number: 4 (lower is better) Translates to: ETQQVSTITPLLRTADYTRIQLL*IQKTDY Trigger: GTAGTCTGTCTTTTGAATTCACAGCAGTTGTATCCT...CGTGTAATCTGCAGTCCTTAACAGTGGCGTAATTGTACTTACCTGTTGTGTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000356057.9 ENST00000616435.5 |
||
| CDS-3UTR GCA 90 bp | GAAACACAACAGGTAAGTACAATTACGCCACTGTTAAGGACTGCAGATTACACGGTTCAGGAGATTCTGTaGAAGGCTGACAATATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: ETQQVSTITPLLRTADYTVQEIL*KADNIS Trigger: AGAAATATTGTCAGCCTTGCACAGAATCTCCTGAAC...CGTGTAATCTGCAGTCCTTAACAGTGGCGTAATTGTACTTACCTGTTGTGTTTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000356057.9 ENST00000425728.6 ENST00000554271.5 ENST00000616435.5 |
||
| CDS-3UTR GCA 90 bp | AACACAACAGGTAAGTACAATTACGCCACTGTTAAGGACTGCAGATTACACGTGAACCAGAGGAAGCATTaGCATAAATCCAAGATAGAG | + |
|
Preference number: 4 (lower is better) Translates to: NTTGKYNYATVKDCRLHVNQRKH*HKSKIE Trigger: CTCTATCTTGGATTTATGGCAATGCTTCCTCTGGTT...CACGTGTAATCTGCAGTCCTTAACAGTGGCGTAATTGTACTTACCTGTTGTGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000356057.9 ENST00000425728.6 ENST00000554271.5 ENST00000616435.5 |
||
| CDS-3UTR GCA 90 bp | GAAACACAACAGGTAAGTACAATTACGCCACTGTTAAGGACTGCAGATTACACGAACCAGAGGAAGCATTaGCATAAATCCAAGATAGAG | + |
|
Preference number: 4 (lower is better) Translates to: ETQQVSTITPLLRTADYTNQRKH*HKSKIE Trigger: CTCTATCTTGGATTTATGGCAATGCTTCCTCTGGTT...CGTGTAATCTGCAGTCCTTAACAGTGGCGTAATTGTACTTACCTGTTGTGTTTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000356057.9 ENST00000425728.6 ENST00000554271.5 ENST00000616435.5 |
||
| CDS-3UTR GCA 90 bp | AACACAACAGGTAAGTACAATTACGCCACTGTTAAGGACTGCAGATTACACGTGATAAAGTCCAAGGCATaGTGGTTGAATATCGACAGT | + |
|
Preference number: 4 (lower is better) Translates to: NTTGKYNYATVKDCRLHVIKSKA*WLNIDS Trigger: ACTGTCGATATTCAACCAGCATGCCTTGGACTTTAT...CACGTGTAATCTGCAGTCCTTAACAGTGGCGTAATTGTACTTACCTGTTGTGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000554271.5 |
||
| CDS-3UTR TCA 90 bp | ACAAACCACAAACCAACCACAGGAAAACCCTTTTTATTCTGTGTATCTTCTGTAGCTCCAAGCGACTGTTaGATTTCTCCTTTCATTTCC | + |
|
Preference number: 4 (lower is better) Translates to: TNHKPTTGKPFLFCVSSVAPSDC*ISPFIS Trigger: GGAAATGAAAGGAGAAATTCAACAGTCGCTTGGAGC...TACAGAAGATACACAGAATAAAAAGGGTTTTCCTGTGGTTGGTTTGTGGTTTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000356057.9 |
||
| CDS-3UTR TCA 90 bp | CAAACTGAAACACAACAGGTAAGTACAATTACGCCACTGTTAAGGACTGCAGATCCGAGTACCATTCAATaGAGAACCAATGTAAAACCA | + |
|
Preference number: 4 (lower is better) Translates to: QTETQQVSTITPLLRTADPSTIQ*RTNVKP Trigger: TGGTTTTACATTGGTTCTTCATTGAATGGTACTCGG...ATCTGCAGTCCTTAACAGTGGCGTAATTGTACTTACCTGTTGTGTTTCAGTTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000356057.9 ENST00000425728.6 ENST00000554271.5 ENST00000616435.5 |
||
| CDS-3UTR TCA 90 bp | AAGATGCATCCTAATTCAGAGATGTCACAAAGTGAAATAAGTATCTCTGGATCACCATGGTTGCAACCATaGGTCTTAAGGCCTTCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: KMHPNSEMSQSEISISGSPWLQP*VLRPSK Trigger: CTTTGAAGGCCTTAAGACTCATGGTTGCAACCATGG...TGATCCAGAGATACTTATTTCACTTTGTGACATCTCTGAATTAGGATGCATCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000356057.9 ENST00000616435.5 |
||
| CDS-3UTR TCA 90 bp | CAAACTGAAACACAACAGGTAAGTACAATTACGCCACTGTTAAGGACTGCAGATATTAAACTAAGGGACTaGAGAGACATTTCGGACCAA | + |
|
Preference number: 4 (lower is better) Translates to: QTETQQVSTITPLLRTADIKLRD*RDISDQ Trigger: TTGGTCCGAAATGTCTCTTCAGTCCCTTAGTTTAAT...ATCTGCAGTCCTTAACAGTGGCGTAATTGTACTTACCTGTTGTGTTTCAGTTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000554271.5 |
||
| CDS-3UTR GCA 90 bp | CAAACTGAAACACAACAGGTAAGTACAATTACGCCACTGTTAAGGACTGCAGATGTTCAGGAGATTCTGTaGAAGGCTGACAATATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: QTETQQVSTITPLLRTADVQEIL*KADNIS Trigger: AGAAATATTGTCAGCCTTGCACAGAATCTCCTGAAC...ATCTGCAGTCCTTAACAGTGGCGTAATTGTACTTACCTGTTGTGTTTCAGTTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000356057.9 ENST00000425728.6 ENST00000554271.5 ENST00000616435.5 |
||
| CDS-3UTR GCA 90 bp | CAAACTGAAACACAACAGGTAAGTACAATTACGCCACTGTTAAGGACTGCAGATAACCAGAGGAAGCATTaGCATAAATCCAAGATAGAG | + |
|
Preference number: 4 (lower is better) Translates to: QTETQQVSTITPLLRTADNQRKH*HKSKIE Trigger: CTCTATCTTGGATTTATGGCAATGCTTCCTCTGGTT...ATCTGCAGTCCTTAACAGTGGCGTAATTGTACTTACCTGTTGTGTTTCAGTTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000356057.9 ENST00000425728.6 ENST00000554271.5 ENST00000616435.5 |
||
| CDS-3UTR GCA 90 bp | GAAACACAACAGGTAAGTACAATTACGCCACTGTTAAGGACTGCAGATTACACGCATCATTTCTATGTTTaGTATCAGACCCCACAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: ETQQVSTITPLLRTADYTHHFYV*YQTPQV Trigger: TACTTGTGGGGTCTGATAGCAAACATAGAAATGATG...CGTGTAATCTGCAGTCCTTAACAGTGGCGTAATTGTACTTACCTGTTGTGTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000356057.9 ENST00000425728.6 ENST00000554271.5 ENST00000616435.5 |
||
| CDS-3UTR GCA 90 bp | AACACAACAGGTAAGTACAATTACGCCACTGTTAAGGACTGCAGATTACACGTGCATCATTTCTATGTTTaGTATCAGACCCCACAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: NTTGKYNYATVKDCRLHVHHFYV*YQTPQV Trigger: TACTTGTGGGGTCTGATAGCAAACATAGAAATGATG...CACGTGTAATCTGCAGTCCTTAACAGTGGCGTAATTGTACTTACCTGTTGTGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000356057.9 ENST00000425728.6 ENST00000554271.5 ENST00000616435.5 |
||
| CDS-3UTR GCA 90 bp | GAAACACAACAGGTAAGTACAATTACGCCACTGTTAAGGACTGCAGATTACACGACTCAAGGATACAACTaGTGTGAATTCAAAAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: ETQQVSTITPLLRTADYTTQGYN*CEFKRQ Trigger: CTGTCTTTTGAATTCACAGCAGTTGTATCCTTGAGT...CGTGTAATCTGCAGTCCTTAACAGTGGCGTAATTGTACTTACCTGTTGTGTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000356057.9 ENST00000616435.5 |
||
| CDS-3UTR GCA 90 bp | AACACAACAGGTAAGTACAATTACGCCACTGTTAAGGACTGCAGATTACACGTGACTCAAGGATACAACTaGTGTGAATTCAAAAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: NTTGKYNYATVKDCRLHVTQGYN*CEFKRQ Trigger: CTGTCTTTTGAATTCACAGCAGTTGTATCCTTGAGT...CACGTGTAATCTGCAGTCCTTAACAGTGGCGTAATTGTACTTACCTGTTGTGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000356057.9 ENST00000616435.5 |
||
| CDS-3UTR GCA 90 bp | CAAACTGAAACACAACAGGTAAGTACAATTACGCCACTGTTAAGGACTGCAGATGCAGTAGACAAATTATaGAGCAACTTGCTTCTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: QTETQQVSTITPLLRTADAVDKL*SNLLLL Trigger: AAGCAGAAGCAAGTTGCTGCATAATTTGTCTACTGC...ATCTGCAGTCCTTAACAGTGGCGTAATTGTACTTACCTGTTGTGTTTCAGTTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000554271.5 |
||
| CDS-3UTR CCA 90 bp | ACAAACCACAAACCAACCACAGGAAAACCCTTTTTATTCTGTGTATCTTCTGTAAATGCAGTGATGTGTTaGAAAAGTGCGCTGGAACTC | + |
|
Preference number: 4 (lower is better) Translates to: TNHKPTTGKPFLFCVSSVNAVMC*KSALEL Trigger: GAGTTCCAGCGCACTTTTCCAACACATCACTGCATT...TACAGAAGATACACAGAATAAAAAGGGTTTTCCTGTGGTTGGTTTGTGGTTTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000356057.9 ENST00000616435.5 |
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| CDS-3UTR TCA 90 bp | CAAACTGAAACACAACAGGTAAGTACAATTACGCCACTGTTAAGGACTGCAGATAGAGATGTCACAAAGTaGAATAAGTATCTCTGGATC | + |
|
Preference number: 4 (lower is better) Translates to: QTETQQVSTITPLLRTADRDVTK*NKYLWI Trigger: GATCCAGAGATACTTATTTCACTTTGTGACATCTCT...ATCTGCAGTCCTTAACAGTGGCGTAATTGTACTTACCTGTTGTGTTTCAGTTTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000356057.9 ENST00000616435.5 |
||
| CDS-3UTR TCA 90 bp | CAAACTGAAACACAACAGGTAAGTACAATTACGCCACTGTTAAGGACTGCAGATCTACTACAGGAAAAGTaGGTGCACTTACTTTCATAT | + |
|
Preference number: 4 (lower is better) Translates to: QTETQQVSTITPLLRTADLLQEK*VHLLSY Trigger: ATATGAAAGTAAGTGCACTCACTTTTCCTGTAGTAG...ATCTGCAGTCCTTAACAGTGGCGTAATTGTACTTACCTGTTGTGTTTCAGTTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000356057.9 ENST00000616435.5 |
||
| CDS-3UTR GCA 90 bp | ACAAACCACAAACCAACCACAGGAAAACCCTTTTTATTCTGTGTATCTTCTGTAGCCACTGTTAAGGACTaGAGATTACACGTGTTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: TNHKPTTGKPFLFCVSSVATVKD*RLHVLK Trigger: CTTTAACACGTGTAATCTGCAGTCCTTAACAGTGGC...TACAGAAGATACACAGAATAAAAAGGGTTTTCCTGTGGTTGGTTTGTGGTTTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000356057.9 ENST00000616435.5 |
||
| CDS-3UTR GCA 90 bp | CAAACTGAAACACAACAGGTAAGTACAATTACGCCACTGTTAAGGACTGCAGATCATCATTTCTATGTTTaGTATCAGACCCCACAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: QTETQQVSTITPLLRTADHHFYV*YQTPQV Trigger: TACTTGTGGGGTCTGATAGCAAACATAGAAATGATG...ATCTGCAGTCCTTAACAGTGGCGTAATTGTACTTACCTGTTGTGTTTCAGTTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000356057.9 ENST00000425728.6 ENST00000554271.5 ENST00000616435.5 |
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| CDS-3UTR CCA 90 bp | AACACATTCGTACAAGGGTTCATTTCCCAGTGGTTAAATGTACTGAGAAAAATAAATGCAGTGATGTGTTaGAAAAGTGCGCTGGAACTC | + |
|
Preference number: 4 (lower is better) Translates to: NTFVQGFISQWLNVLRKINAVMC*KSALEL Trigger: GAGTTCCAGCGCACTTTTCCAACACATCACTGCATT...TATTTTTCTCAGTACATTTAACCACTGGGAAATGAACCCTTGTACGAATGTGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000356057.9 ENST00000616435.5 |
||
| CDS-3UTR CCA 90 bp | CAAACTGAAACACAACAGGTAAGTACAATTACGCCACTGTTAAGGACTGCAGATTATCCACTCTGGAAATaGAGATTATTCCATAGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: QTETQQVSTITPLLRTADYPLWK*RLFHRH Trigger: ATGCCTATGGAATAATCTCCATTTCCAGAGTGGATA...ATCTGCAGTCCTTAACAGTGGCGTAATTGTACTTACCTGTTGTGTTTCAGTTTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000356057.9 ENST00000425728.6 ENST00000554271.5 ENST00000616435.5 |
||
| CDS-3UTR CCA 90 bp | AACACAACAGGTAAGTACAATTACGCCACTGTTAAGGACTGCAGATTACACGTGCAAGTTTATCCACTCTaGAAATGGAGATTATTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: NTTGKYNYATVKDCRLHVQVYPL*KWRLFH Trigger: ATGGAATAATCTCCATTTCCAGAGTGGATAAACTTG...CACGTGTAATCTGCAGTCCTTAACAGTGGCGTAATTGTACTTACCTGTTGTGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000356057.9 ENST00000425728.6 ENST00000554271.5 ENST00000616435.5 |
||
| CDS-3UTR CCA 90 bp | GAAACACAACAGGTAAGTACAATTACGCCACTGTTAAGGACTGCAGATTACACGCAAGTTTATCCACTCTaGAAATGGAGATTATTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: ETQQVSTITPLLRTADYTQVYPL*KWRLFH Trigger: ATGGAATAATCTCCATTTCCAGAGTGGATAAACTTG...CGTGTAATCTGCAGTCCTTAACAGTGGCGTAATTGTACTTACCTGTTGTGTTTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000356057.9 ENST00000425728.6 ENST00000554271.5 ENST00000616435.5 |
||
| CDS-3UTR CCA 90 bp | AACACATTCGTACAAGGGTTCATTTCCCAGTGGTTAAATGTACTGAGAAAAATAAAGTCCAAGGCATGCTaGTTGAATATCGACAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: NTFVQGFISQWLNVLRKIKSKAC*LNIDSH Trigger: ATGGCTGTCGATATTCAACCAGCATGCCTTGGACTT...TATTTTTCTCAGTACATTTAACCACTGGGAAATGAACCCTTGTACGAATGTGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000616435.5 |
||
| CDS-3UTR TCA 90 bp | ACAAACCACAAACCAACCACAGGAAAACCCTTTTTATTCTGTGTATCTTCTGTAAGGATACAACTGCTGTaGATTCAAAAGACAGACTAC | + |
|
Preference number: 4 (lower is better) Translates to: TNHKPTTGKPFLFCVSSVRIQLL*IQKTDY Trigger: GTAGTCTGTCTTTTGAATTCACAGCAGTTGTATCCT...TACAGAAGATACACAGAATAAAAAGGGTTTTCCTGTGGTTGGTTTGTGGTTTGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000356057.9 ENST00000616435.5 |
||
| CDS-3UTR GCA 90 bp | AACACATTCGTACAAGGGTTCATTTCCCAGTGGTTAAATGTACTGAGAAAAATAGCCACTGTTAAGGACTaGAGATTACACGTGTTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: NTFVQGFISQWLNVLRKIATVKD*RLHVLK Trigger: CTTTAACACGTGTAATCTGCAGTCCTTAACAGTGGC...TATTTTTCTCAGTACATTTAACCACTGGGAAATGAACCCTTGTACGAATGTGTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000356057.9 ENST00000616435.5 |
||
| CDS-3UTR TCA 90 bp | AAGATGCATCCTAATTCAGAGATGTCACAAAGTGAAATAAGTATCTCTGGATCACCGAGTACCATTCAATaGAGAACCAATGTAAAACCA | + |
|
Preference number: 4 (lower is better) Translates to: KMHPNSEMSQSEISISGSPSTIQ*RTNVKP Trigger: TGGTTTTACATTGGTTCTTCATTGAATGGTACTCGG...TGATCCAGAGATACTTATTTCACTTTGTGACATCTCTGAATTAGGATGCATCTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000356057.9 ENST00000616435.5 |
||
| CDS-3UTR GCA 90 bp | AAGATGCATCCTAATTCAGAGATGTCACAAAGTGAAATAAGTATCTCTGGATCAGTTCAGGAGATTCTGTaGAAGGCTGACAATATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KMHPNSEMSQSEISISGSVQEIL*KADNIS Trigger: AGAAATATTGTCAGCCTTGCACAGAATCTCCTGAAC...TGATCCAGAGATACTTATTTCACTTTGTGACATCTCTGAATTAGGATGCATCTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000356057.9 ENST00000616435.5 |
||
| CDS-3UTR CCA 90 bp | AAGAAACACATTCGTACAAGGGTTCATTTCCCAGTGGTTAAATGTACTGAGAAATATCCACTCTGGAAATaGAGATTATTCCATAGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: KKHIRTRVHFPVVKCTEKYPLWK*RLFHRH Trigger: ATGCCTATGGAATAATCTCCATTTCCAGAGTGGATA...TTTCTCAGTACATTTAACCACTGGGAAATGAACCCTTGTACGAATGTGTTTCTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000356057.9 ENST00000616435.5 |
||
| CDS-3UTR CCA 90 bp | AAGAAACACATTCGTACAAGGGTTCATTTCCCAGTGGTTAAATGTACTGAGAAAGGGTTCATTTCCCAGTaGTTAAATGTACTGAGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: KKHIRTRVHFPVVKCTEKGFISQ*LNVLRK Trigger: TTTTCTCAGTACATTTAACCACTGGGAAATGAACCC...TTTCTCAGTACATTTAACCACTGGGAAATGAACCCTTGTACGAATGTGTTTCTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000356057.9 ENST00000616435.5 |
||
| CDS-3UTR TCA 90 bp | AACACATTCGTACAAGGGTTCATTTCCCAGTGGTTAAATGTACTGAGAAAAATATATATACCCGAGATATaGGAGGAAACTATTTACCAG | + |
|
Preference number: 4 (lower is better) Translates to: NTFVQGFISQWLNVLRKIYIPEI*EETIYQ Trigger: CTGGTAAATAGTTTCCTCTCATATCTCGGGTATATA...TATTTTTCTCAGTACATTTAACCACTGGGAAATGAACCCTTGTACGAATGTGTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000356057.9 ENST00000616435.5 |
||
| CDS-3UTR TCA 90 bp | AAGATGCATCCTAATTCAGAGATGTCACAAAGTGAAATAAGTATCTCTGGATCAAGAGATGTCACAAAGTaGAATAAGTATCTCTGGATC | + |
|
Preference number: 4 (lower is better) Translates to: KMHPNSEMSQSEISISGSRDVTK*NKYLWI Trigger: GATCCAGAGATACTTATTTCACTTTGTGACATCTCT...TGATCCAGAGATACTTATTTCACTTTGTGACATCTCTGAATTAGGATGCATCTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000356057.9 ENST00000616435.5 |
||
| CDS-3UTR TCA 90 bp | AACACATTCGTACAAGGGTTCATTTCCCAGTGGTTAAATGTACTGAGAAAAATACTACTACAGGAAAAGTaGGTGCACTTACTTTCATAT | + |
|
Preference number: 4 (lower is better) Translates to: NTFVQGFISQWLNVLRKILLQEK*VHLLSY Trigger: ATATGAAAGTAAGTGCACTCACTTTTCCTGTAGTAG...TATTTTTCTCAGTACATTTAACCACTGGGAAATGAACCCTTGTACGAATGTGTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000356057.9 ENST00000616435.5 |
||
| CDS-3UTR CCA 90 bp | ACAAACCACAAACCAACCACAGGAAAACCCTTTTTATTCTGTGTATCTTCTGTACAAGTTTATCCACTCTaGAAATGGAGATTATTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: TNHKPTTGKPFLFCVSSVQVYPL*KWRLFH Trigger: ATGGAATAATCTCCATTTCCAGAGTGGATAAACTTG...TACAGAAGATACACAGAATAAAAAGGGTTTTCCTGTGGTTGGTTTGTGGTTTGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000356057.9 ENST00000616435.5 |
||
| CDS-3UTR CCA 90 bp | AACACATTCGTACAAGGGTTCATTTCCCAGTGGTTAAATGTACTGAGAAAAATAGGGTTCATTTCCCAGTaGTTAAATGTACTGAGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: NTFVQGFISQWLNVLRKIGFISQ*LNVLRK Trigger: TTTTCTCAGTACATTTAACCACTGGGAAATGAACCC...TATTTTTCTCAGTACATTTAACCACTGGGAAATGAACCCTTGTACGAATGTGTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000356057.9 ENST00000616435.5 |
||
| CDS-3UTR CCA 90 bp | AAGATGCATCCTAATTCAGAGATGTCACAAAGTGAAATAAGTATCTCTGGATCACAAGTTTATCCACTCTaGAAATGGAGATTATTCCAT | + |
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Preference number: 4 (lower is better) Translates to: KMHPNSEMSQSEISISGSQVYPL*KWRLFH Trigger: ATGGAATAATCTCCATTTCCAGAGTGGATAAACTTG...TGATCCAGAGATACTTATTTCACTTTGTGACATCTCTGAATTAGGATGCATCTT 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000356057.9 ENST00000616435.5 |
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| CDS-3UTR CAA 90 bp | AACACAACAGGTAAGTACAATTACGCCACTGTTAAGGACTGCAGATTACACGTGTCCCCTAGTAGCCCGTaGCGGACAGACCACCCCAAC | + |
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Preference number: 5 (lower is better) Translates to: NTTGKYNYATVKDCRLHVSPSSP*RTDHPN Trigger: GTTGGGGTGGTCTGTCCGCAACGGGCTACTAGGGGA...CACGTGTAATCTGCAGTCCTTAACAGTGGCGTAATTGTACTTACCTGTTGTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000554271.5 |
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| CDS-3UTR CAA 90 bp | CAAACTGAAACACAACAGGTAAGTACAATTACGCCACTGTTAAGGACTGCAGATACGCTTCCCGGGATCTaGGCGACCACTCACCCATGG | + |
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Preference number: 5 (lower is better) Translates to: QTETQQVSTITPLLRTADTLPGI*ATTHPW Trigger: CCATGGGTGAGTGGTCGCCAAGATCCCGGGAAGCGT...ATCTGCAGTCCTTAACAGTGGCGTAATTGTACTTACCTGTTGTGTTTCAGTTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000554271.5 |
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| CDS TCA 90 bp | AGTCAACCCTCAAGCAAGTGTTCCCTCGACATTAAACTAAGGGACTaGAGAGACATTTCGGACCAAACAACAAAGACCTGGCATTTCGCC | + |
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Preference number: 5 (lower is better) Translates to: SQPSSKCSLDIKLRD*RDISDQTTKTWHFA Trigger: GGCGAAATGCCAGGTCTTTGTTGTTTGGTCCGAAATGTCTCTTCAGTCCCTTAGTTTAATGTCGAGGGAACACTTGCTTGAGGGTTGACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000554271.5 |
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| CDS-3UTR CAA 90 bp | AACACAACAGGTAAGTACAATTACGCCACTGTTAAGGACTGCAGATTACACGTGTCGTTCTCTGTCCTCTaGGGCATACCCCACATTCTC | + |
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Preference number: 5 (lower is better) Translates to: NTTGKYNYATVKDCRLHVSFSVL*GIPHIL Trigger: GAGAATGTGGGGTATGCCCAAGAGGACAGAGAACGA...CACGTGTAATCTGCAGTCCTTAACAGTGGCGTAATTGTACTTACCTGTTGTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000356057.9 ENST00000425728.6 ENST00000554271.5 ENST00000616435.5 |
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| CDS-3UTR CAA 90 bp | CAAACTGAAACACAACAGGTAAGTACAATTACGCCACTGTTAAGGACTGCAGATTCGTTCTCTGTCCTCTaGGGCATACCCCACATTCTC | + |
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Preference number: 5 (lower is better) Translates to: QTETQQVSTITPLLRTADSFSVL*GIPHIL Trigger: GAGAATGTGGGGTATGCCCAAGAGGACAGAGAACGA...ATCTGCAGTCCTTAACAGTGGCGTAATTGTACTTACCTGTTGTGTTTCAGTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000356057.9 ENST00000425728.6 ENST00000554271.5 ENST00000616435.5 |
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| CDS-3UTR CAA 90 bp | CAACTGCCTGAAGCACGGTTAAAATTGGGAAGAAGTAAAGTGCAGCATAAATACTCCAAGGCATGCTGGTaGAATATCGACAGCCATGGG | + |
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Preference number: 5 (lower is better) Translates to: QLPEARLKLGRSKVQHKYSKACW*NIDSHG Trigger: CCCATGGCTGTCGATATTCAACCAGCATGCCTTGGA...GTATTTATGCTGCACTTTACTTCTTCCCAATTTTAACCGTGCTTCAGGCAGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555491.5 |
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| CDS-3UTR CAA 90 bp | GAAACACAACAGGTAAGTACAATTACGCCACTGTTAAGGACTGCAGATTACACGGGCTCCAAGCGACTGTaGAATTTCTCCTTTCATTTC | + |
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Preference number: 5 (lower is better) Translates to: ETQQVSTITPLLRTADYTGSKRL*NFSFHF Trigger: GAAATGAAAGGAGAAATTCAACAGTCGCTTGGAGCC...CGTGTAATCTGCAGTCCTTAACAGTGGCGTAATTGTACTTACCTGTTGTGTTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000356057.9 ENST00000554271.5 |
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| CDS-3UTR CAA 90 bp | AACACAACAGGTAAGTACAATTACGCCACTGTTAAGGACTGCAGATTACACGTGGGCTCCAAGCGACTGTaGAATTTCTCCTTTCATTTC | + |
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Preference number: 5 (lower is better) Translates to: NTTGKYNYATVKDCRLHVGSKRL*NFSFHF Trigger: GAAATGAAAGGAGAAATTCAACAGTCGCTTGGAGCC...CACGTGTAATCTGCAGTCCTTAACAGTGGCGTAATTGTACTTACCTGTTGTGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000356057.9 ENST00000554271.5 |
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| CDS-3UTR CAA 90 bp | ACAAACCACAAACCAACCACAGGAAAACCCTTTTTATTCTGTGTATCTTCTGTATCGTTCTCTGTCCTCTaGGGCATACCCCACATTCTC | + |
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Preference number: 5 (lower is better) Translates to: TNHKPTTGKPFLFCVSSVSFSVL*GIPHIL Trigger: GAGAATGTGGGGTATGCCCAAGAGGACAGAGAACGA...TACAGAAGATACACAGAATAAAAAGGGTTTTCCTGTGGTTGGTTTGTGGTTTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000356057.9 ENST00000616435.5 |
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| CDS-3UTR CAA 90 bp | GAAACACAACAGGTAAGTACAATTACGCCACTGTTAAGGACTGCAGATTACACGTCCAAGGCATGCTGGTaGAATATCGACAGTAAGCAA | + |
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Preference number: 5 (lower is better) Translates to: ETQQVSTITPLLRTADYTSKACW*NIDSKQ Trigger: TTGCTTACTGTCGATATTCAACCAGCATGCCTTGGA...CGTGTAATCTGCAGTCCTTAACAGTGGCGTAATTGTACTTACCTGTTGTGTTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000554271.5 |
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| CDS-3UTR CAA 90 bp | AAGAAACACATTCGTACAAGGGTTCATTTCCCAGTGGTTAAATGTACTGAGAAATCCAAGGCATGCTGGTaGAATATCGACAGCCATGGG | + |
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Preference number: 5 (lower is better) Translates to: KKHIRTRVHFPVVKCTEKSKACW*NIDSHG Trigger: CCCATGGCTGTCGATATTCAACCAGCATGCCTTGGA...TTTCTCAGTACATTTAACCACTGGGAAATGAACCCTTGTACGAATGTGTTTCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000616435.5 |
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| CDS-3UTR CAA 90 bp | GAAACACAACAGGTAAGTACAATTACGCCACTGTTAAGGACTGCAGATTACACGGAAGCACGGTTAAAATaGGGAAGAAGTAAAGTGCAG | + |
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Preference number: 5 (lower is better) Translates to: ETQQVSTITPLLRTADYTEARLK*GRSKVQ Trigger: CTGCACTTTACTTCTTCCCAATTTTAACCGTGCTTC...CGTGTAATCTGCAGTCCTTAACAGTGGCGTAATTGTACTTACCTGTTGTGTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000356057.9 ENST00000425728.6 ENST00000554271.5 ENST00000616435.5 |
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| CDS-3UTR CAA 90 bp | AACACAACAGGTAAGTACAATTACGCCACTGTTAAGGACTGCAGATTACACGTGGAAGCACGGTTAAAATaGGGAAGAAGTAAAGTGCAG | + |
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Preference number: 5 (lower is better) Translates to: NTTGKYNYATVKDCRLHVEARLK*GRSKVQ Trigger: CTGCACTTTACTTCTTCCCAATTTTAACCGTGCTTC...CACGTGTAATCTGCAGTCCTTAACAGTGGCGTAATTGTACTTACCTGTTGTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000356057.9 ENST00000425728.6 ENST00000554271.5 ENST00000616435.5 |
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| CDS-3UTR CAA 90 bp | CACCAACTGCCTGAAGCACGGTTAAAATTGGGAAGAAGTAAAGTGCAGCATAAAGAAGCACGGTTAAAATaGGGAAGAAGTAAAGTGCAG | + |
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Preference number: 5 (lower is better) Translates to: HQLPEARLKLGRSKVQHKEARLK*GRSKVQ Trigger: CTGCACTTTACTTCTTCCCAATTTTAACCGTGCTTC...TTTATGCTGCACTTTACTTCTTCCCAATTTTAACCGTGCTTCAGGCAGTTGGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000555491.5 |
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| CDS GCA 90 bp | CCCAAATTATTCACGAATTCACAATCTAGACTGCCTGGTCTACAGTaGCTTCTCTCCTTTCACATTCAAGCAGACTTTTTACTTCCTTCT | + |
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Preference number: 5 (lower is better) Translates to: PKLFTNSQSRLPGLQ*LLSFHIQADFLLPS Trigger: AGAAGGAAGTAAAAAGTCTGCTTGAATGTGAAAGGAGAGAAGGCACTGTAGACCAGGCAGTCTAGATTGTGAATTCGTGAATAATTTGGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000553156.2 |
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| CDS GCA 90 bp | TTGAACAATCATTTCCCAAATTATTCACGAATTCACAATCTAGACTaGCTGGTCTACAGTGCCTTCTCTCCTTTCACATTCAAGCAGACT | + |
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Preference number: 5 (lower is better) Translates to: LNNHFPNYSRIHNLD*LVYSAFSPFTFKQT Trigger: AGTCTGCTTGAATGTGAAAGGAGAGAAGGCACTGTAGACCAGGCAGTCTAGATTGTGAATTCGTGAATAATTTGGGAAATGATTGTTCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000553156.2 |
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| CDS-3UTR CAA 90 bp | AAGATGCATCCTAATTCAGAGATGTCACAAAGTGAAATAAGTATCTCTGGATCAGAAGCACGGTTAAAATaGGGAAGAAGTAAAGTGCAG | + |
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Preference number: 5 (lower is better) Translates to: KMHPNSEMSQSEISISGSEARLK*GRSKVQ Trigger: CTGCACTTTACTTCTTCCCAATTTTAACCGTGCTTC...TGATCCAGAGATACTTATTTCACTTTGTGACATCTCTGAATTAGGATGCATCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000356057.9 ENST00000616435.5 |
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| CDS GCA 72 bp | TCAGCCCTGCATTTCTCTGTCTCGATTACCCAGCTCTaGAGTTGTAGTGGGAAAGCAGCCATAGAGAATACA | + |
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Preference number: 6 (lower is better) Translates to: SALHFSVSITQL*SCSGKAAIENT Trigger: TGTATTCTCTATGGCTGCTTTCCCACTACAACTGCAGAGCTGGGTAATCGAGACAGAGAAATGCAGGGCTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000553647.1 |
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| CDS TCA 72 bp | TCAAGCAAGTGTTCCCTCGACATTAAACTAAGGGACTaGAGAGACATTTCGGACCAAACAACAAAGACCTGG | + |
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Preference number: 6 (lower is better) Translates to: SSKCSLDIKLRD*RDISDQTTKTW Trigger: CCAGGTCTTTGTTGTTTGGTCCGAAATGTCTCTTCAGTCCCTTAGTTTAATGTCGAGGGAACACTTGCTTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000554271.5 |
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| CDS GCA 72 bp | TTCACGAATTCACAATCTAGACTGCCTGGTCTACAGTaGCTTCTCTCCTTTCACATTCAAGCAGACTTTTTA | + |
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Preference number: 6 (lower is better) Translates to: FTNSQSRLPGLQ*LLSFHIQADFL Trigger: TAAAAAGTCTGCTTGAATGTGAAAGGAGAGAAGGCACTGTAGACCAGGCAGTCTAGATTGTGAATTCGTGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000553156.2 |
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| CDS GCA 72 bp | CATTTCCCAAATTATTCACGAATTCACAATCTAGACTaGCTGGTCTACAGTGCCTTCTCTCCTTTCACATTC | + |
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Preference number: 6 (lower is better) Translates to: HFPNYSRIHNLD*LVYSAFSPFTF Trigger: GAATGTGAAAGGAGAGAAGGCACTGTAGACCAGGCAGTCTAGATTGTGAATTCGTGAATAATTTGGGAAATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000553156.2 |
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