RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for JCAD (Homo sapiens)

Ensembl gene IDs: ENSG00000165757

Ensembl transcript IDs: ENST00000375377.2

Found 319 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCGGGCAACAGCCAGTGTCCCAAACTCCTTCACAAGAGCATGGACTaGAGGCCATGGAGACACAGAGGGGAGCACACCATTCACAGGCCT +
Preference number: 1 (lower is better)
Translates to: PGNSQCPKLLHKSMD*RPWRHRGEHTIHRP
Trigger: AGGCCTGTGAATGGTGTGCTCCCCTCTGTGTCTCCATGGCCTGCAGTCCATGCTCTTGTGAAGGAGTTTGGGACACTGGCTGTTGCCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375377.2
3UTR GCA 90 bp AGAGGCTTTCCAAGGTCGATGCCAGGAATCTGCAGGAGCCTTGGCTaGCTTCCCACACTGCTGATGAACCAAGGACTGTTTCGACAGGCA +
Preference number: 1 (lower is better)
Translates to: RGFPRSMPGICRSLG*LPTLLMNQGLFRQA
Trigger: TGCCTGTCGAAACAGTCCTTGGTTCATCAGCAGTGTGGGAAGGCAGCCAAGGCTCCTGCAGATTCCTGGCATCGACCTTGGAAAGCCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375377.2
3UTR CCA 90 bp TCGCAGAGGCTTTCCAAGGTCGATGCCAGGAATCTGCAGGAGCCTTaGCTGCCTTCCCACACTGCTGATGAACCAAGGACTGTTTCGACA +
Preference number: 1 (lower is better)
Translates to: SQRLSKVDARNLQEP*LPSHTADEPRTVST
Trigger: TGTCGAAACAGTCCTTGGTTCATCAGCAGTGTGGGAAGGCAGCCAAGGCTCCTGCAGATTCCTGGCATCGACCTTGGAAAGCCTCTGCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375377.2
3UTR GCA 90 bp ACACACAAGTATCGCAGAGGCTTTCCAAGGTCGATGCCAGGAATCTaGAGGAGCCTTGGCTGCCTTCCCACACTGCTGATGAACCAAGGA +
Preference number: 1 (lower is better)
Translates to: THKYRRGFPRSMPGI*RSLGCLPTLLMNQG
Trigger: TCCTTGGTTCATCAGCAGTGTGGGAAGGCAGCCAAGGCTCCTGCAGATTCCTGGCATCGACCTTGGAAAGCCTCTGCGATACTTGTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375377.2
3UTR GCA 90 bp GTTTGCTGCCATATGCTTCTCAACTTGAACTTGCCTTTGTCTCCTTaGTCCGTGACAATGAATGTCTCACATCTCGGCTCTGCTGCGGGG +
Preference number: 1 (lower is better)
Translates to: VCCHMLLNLNLPLSP*SVTMNVSHLGSAAG
Trigger: CCCCGCAGCAGAGCCGAGATGTGAGACATTCATTGTCACGGAGCAAGGAGACAAAGGCAAGTTCAAGTTGAGAAGCATATGGCAGCAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375377.2
3UTR GCA 90 bp TCAGTCACTAAACAGAGACCACAGAACAAGGACCTCCCTGTCCTCTaGTGTATTCGTACACACAAGTATCGCAGAGGCTTTCCAAGGTCG +
Preference number: 1 (lower is better)
Translates to: SVTKQRPQNKDLPVL*CIRTHKYRRGFPRS
Trigger: CGACCTTGGAAAGCCTCTGCGATACTTGTGTGTACGAATACAGCAGAGGACAGGGAGGTCCTTGTTCTGTGGTCTCTGTTTAGTGACTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375377.2
3UTR TCA 90 bp TTCATACGGAAAGGGTTCCTCCTAACCCCTATCAAAGCATGGGGATaGACGGCCAGACAATCTGGGCTTGCCTTTGGGTTTAAGTTTCAG +
Preference number: 1 (lower is better)
Translates to: FIRKGFLLTPIKAWG*TARQSGLAFGFKFQ
Trigger: CTGAAACTTAAACCCAAAGGCAAGCCCAGATTGTCTGGCCGTTCATCCCCATGCTTTGATAGGGGTTAGGAGGAACCCTTTCCGTATGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375377.2
3UTR TCA 90 bp TCTACATGGGGAAGTGGGGCTGATAGACTAAATCTACCAGCTACTTaGGAATACTCAATTCGCAACGGAATGCAAGCTCCACCGGCATTT +
Preference number: 1 (lower is better)
Translates to: STWGSGADRLNLPAT*EYSIRNGMQAPPAF
Trigger: AAATGCCGGTGGAGCTTGCATTCCGTTGCGAATTGAGTATTCTCAAGTAGCTGGTAGATTTAGTCTATCAGCCCCACTTCCCCATGTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375377.2
3UTR-3UTR CCA 90 bp CTGCCTTCCCACACTGCTGATGAACCAAGGACTGTTTCGACAGGCAGGTTGCTATGGTGGGTCCCAGAGTaGACCAACCCACACTCCTGG +
Preference number: 2 (lower is better)
Translates to: LPSHTADEPRTVSTGRLLWWVPE*TNPHSW
Trigger: CCAGGAGTGTGGGTTGGTCCACTCTGGGACCCACCA...TAGCAACCTGCCTGTCGAAACAGTCCTTGGTTCATCAGCAGTGTGGGAAGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375377.2
3UTR-3UTR CCA 90 bp TATCGCAGAGGCTTTCCAAGGTCGATGCCAGGAATCTGCAGGAGCCTTGGCTGCTCCTTCACAAGAGCATaGACTGCAGGCCATGGAGAC +
Preference number: 2 (lower is better)
Translates to: YRRGFPRSMPGICRSLGCSFTRA*TAGHGD
Trigger: GTCTCCATGGCCTGCAGTCCATGCTCTTGTGAAGGA...GCAGCCAAGGCTCCTGCAGATTCCTGGCATCGACCTTGGAAAGCCTCTGCGATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375377.2
3UTR-3UTR CCA 90 bp CTGCCTTCCCACACTGCTGATGAACCAAGGACTGTTTCGACAGGCAGGTTGCTATCCCCCTTCTTAGTGTaGTGGGTCCCAGAGTGGACC +
Preference number: 2 (lower is better)
Translates to: LPSHTADEPRTVSTGRLLSPFLV*WVPEWT
Trigger: GGTCCACTCTGGGACCCACCACACTAAGAAGGGGGA...TAGCAACCTGCCTGTCGAAACAGTCCTTGGTTCATCAGCAGTGTGGGAAGGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375377.2
3UTR-3UTR GCA 90 bp CTGCCTTCCCACACTGCTGATGAACCAAGGACTGTTTCGACAGGCAGGTTGCTACAGTCAGGGGCTGGGTaGACTGTCAGTGAGGAGTTT +
Preference number: 2 (lower is better)
Translates to: LPSHTADEPRTVSTGRLLQSGAG*TVSEEF
Trigger: AAACTCCTCACTGACAGTGCACCCAGCCCCTGACTG...TAGCAACCTGCCTGTCGAAACAGTCCTTGGTTCATCAGCAGTGTGGGAAGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375377.2
3UTR-3UTR CCA 90 bp CTGCCTTCCCACACTGCTGATGAACCAAGGACTGTTTCGACAGGCAGGTTGCTACCCTTCTTAGTGTGGTaGGTCCCAGAGTGGACCAAC +
Preference number: 2 (lower is better)
Translates to: LPSHTADEPRTVSTGRLLPFLVW*VPEWTN
Trigger: GTTGGTCCACTCTGGGACCCACCACACTAAGAAGGG...TAGCAACCTGCCTGTCGAAACAGTCCTTGGTTCATCAGCAGTGTGGGAAGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375377.2
3UTR-3UTR TCA 90 bp GACATAATCCTGAAAACCCAGTCAGGGGCTGGGTGCACTGTCAGTGAGGAGTTTATCATACGGTACAGATaGGAACAGGCCGGGACAGCC +
Preference number: 2 (lower is better)
Translates to: DIILKTQSGAGCTVSEEFIIRYR*EQAGTA
Trigger: GGCTGTCCCGGCCTGTTCTCATCTGTACCGTATGAT...AAACTCCTCACTGACAGTGCACCCAGCCCCTGACTGGGTTTTCAGGATTATGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375377.2
3UTR-3UTR TCA 90 bp TATCGCAGAGGCTTTCCAAGGTCGATGCCAGGAATCTGCAGGAGCCTTGGCTGCAGCTACAACAGTGTCTaGACTCTTCCCCACTCAACT +
Preference number: 2 (lower is better)
Translates to: YRRGFPRSMPGICRSLGCSYNSV*TLPHST
Trigger: AGTTGAGTGGGGAAGAGTTCAGACACTGTTGTAGCT...GCAGCCAAGGCTCCTGCAGATTCCTGGCATCGACCTTGGAAAGCCTCTGCGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375377.2
3UTR-3UTR GCA 90 bp CTGCCTTCCCACACTGCTGATGAACCAAGGACTGTTTCGACAGGCAGGTTGCTACACAAGAGCATGGACTaGAGGCCATGGAGACACAGA +
Preference number: 2 (lower is better)
Translates to: LPSHTADEPRTVSTGRLLHKSMD*RPWRHR
Trigger: TCTGTGTCTCCATGGCCTGCAGTCCATGCTCTTGTG...TAGCAACCTGCCTGTCGAAACAGTCCTTGGTTCATCAGCAGTGTGGGAAGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375377.2
3UTR-3UTR GCA 90 bp TATCGCAGAGGCTTTCCAAGGTCGATGCCAGGAATCTGCAGGAGCCTTGGCTGCAAGGACCTCCCGCCATaGAGATTCTTAAAGGTCACT +
Preference number: 2 (lower is better)
Translates to: YRRGFPRSMPGICRSLGCKDLPP*RFLKVT
Trigger: AGTGACCTTTAAGAATCTGCATGGCGGGAGGTCCTT...GCAGCCAAGGCTCCTGCAGATTCCTGGCATCGACCTTGGAAAGCCTCTGCGATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375377.2
3UTR-3UTR TCA 90 bp TATCGCAGAGGCTTTCCAAGGTCGATGCCAGGAATCTGCAGGAGCCTTGGCTGCCTTAGAATTTCCACGTaGATGAAACCCGCAACCTAC +
Preference number: 2 (lower is better)
Translates to: YRRGFPRSMPGICRSLGCLRIST*MKPATY
Trigger: GTAGGTTGCGGGTTTCATTCACGTGGAAATTCTAAG...GCAGCCAAGGCTCCTGCAGATTCCTGGCATCGACCTTGGAAAGCCTCTGCGATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375377.2
3UTR-3UTR GCA 90 bp CTGCCTTCCCACACTGCTGATGAACCAAGGACTGTTTCGACAGGCAGGTTGCTACAATTCGCAACGGAATaGAAGCTCCACCGGCATTTC +
Preference number: 2 (lower is better)
Translates to: LPSHTADEPRTVSTGRLLQFATE*KLHRHF
Trigger: GAAATGCCGGTGGAGCTTGCATTCCGTTGCGAATTG...TAGCAACCTGCCTGTCGAAACAGTCCTTGGTTCATCAGCAGTGTGGGAAGGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375377.2
3UTR-3UTR GCA 90 bp TATCGCAGAGGCTTTCCAAGGTCGATGCCAGGAATCTGCAGGAGCCTTGGCTGCGTTTCCCGCACTTATTaGTGCTGTGAAAACTGGAGT +
Preference number: 2 (lower is better)
Translates to: YRRGFPRSMPGICRSLGCVSRTY*CCENWS
Trigger: ACTCCAGTTTTCACAGCAGCAATAAGTGCGGGAAAC...GCAGCCAAGGCTCCTGCAGATTCCTGGCATCGACCTTGGAAAGCCTCTGCGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375377.2
3UTR-3UTR CCA 90 bp TATCGCAGAGGCTTTCCAAGGTCGATGCCAGGAATCTGCAGGAGCCTTGGCTGCAAAGTGAACCCTCTTTaGGTTCCTCTCACACAAAGG +
Preference number: 2 (lower is better)
Translates to: YRRGFPRSMPGICRSLGCKVNPL*VPLTQR
Trigger: CCTTTGTGTGAGAGGAACCCAAAGAGGGTTCACTTT...GCAGCCAAGGCTCCTGCAGATTCCTGGCATCGACCTTGGAAAGCCTCTGCGATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375377.2
3UTR-3UTR TCA 90 bp TGCTGTATTCGTACACACAAGTATCGCAGAGGCTTTCCAAGGTCGATGCCAGGACAGAACACGCAAACGTaGTCTCTGGGGGTCACAAGA +
Preference number: 2 (lower is better)
Translates to: CCIRTHKYRRGFPRSMPGQNTQT*SLGVTR
Trigger: TCTTGTGACCCCCAGAGATCACGTTTGCGTGTTCTG...TCCTGGCATCGACCTTGGAAAGCCTCTGCGATACTTGTGTGTACGAATACAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375377.2
3UTR-3UTR GCA 90 bp TATCGCAGAGGCTTTCCAAGGTCGATGCCAGGAATCTGCAGGAGCCTTGGCTGCGAAAGACAATTCTGCTaGACTGGTCACTTTGCAAGA +
Preference number: 2 (lower is better)
Translates to: YRRGFPRSMPGICRSLGCERQFC*TGHFAR
Trigger: TCTTGCAAAGTGACCAGTGCAGCAGAATTGTCTTTC...GCAGCCAAGGCTCCTGCAGATTCCTGGCATCGACCTTGGAAAGCCTCTGCGATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375377.2
3UTR-3UTR GCA 90 bp CTGCCTTCCCACACTGCTGATGAACCAAGGACTGTTTCGACAGGCAGGTTGCTACTTTCCAACAAAACCTaGAGGCTGGAGGCCATTCTT +
Preference number: 2 (lower is better)
Translates to: LPSHTADEPRTVSTGRLLLSNKT*RLEAIL
Trigger: AAGAATGGCCTCCAGCCTGCAGGTTTTGTTGGAAAG...TAGCAACCTGCCTGTCGAAACAGTCCTTGGTTCATCAGCAGTGTGGGAAGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375377.2
3UTR CAA 90 bp TGTTTGCTGCCATATGCTTCTCAACTTGAACTTGCCTTTGTCTCCTaGCTCCGTGACAATGAATGTCTCACATCTCGGCTCTGCTGCGGG +
Preference number: 2 (lower is better)
Translates to: CLLPYASQLELAFVS*LRDNECLTSRLCCG
Trigger: CCCGCAGCAGAGCCGAGATGTGAGACATTCATTGTCACGGAGCAAGGAGACAAAGGCAAGTTCAAGTTGAGAAGCATATGGCAGCAAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375377.2
3UTR-3UTR TCA 90 bp TATCGCAGAGGCTTTCCAAGGTCGATGCCAGGAATCTGCAGGAGCCTTGGCTGCTGGCGTGTTTGCAAATaGTCAAAATATTTCACTGCC +
Preference number: 2 (lower is better)
Translates to: YRRGFPRSMPGICRSLGCWRVCK*SKYFTA
Trigger: GGCAGTGAAATATTTTGATCATTTGCAAACACGCCA...GCAGCCAAGGCTCCTGCAGATTCCTGGCATCGACCTTGGAAAGCCTCTGCGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375377.2
3UTR CAA 90 bp CCTTCCCACACTGCTGATGAACCAAGGACTGTTTCGACAGGCAGGTaGCTAGCCCACATCAACCTTTTCAAGAGGCCTCAATCTGAATTT +
Preference number: 2 (lower is better)
Translates to: PSHTADEPRTVSTGR*LAHINLFKRPQSEF
Trigger: AAATTCAGATTGAGGCCTCTTGAAAAGGTTGATGTGGGCTAGCAACCTGCCTGTCGAAACAGTCCTTGGTTCATCAGCAGTGTGGGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375377.2
3UTR-3UTR TCA 90 bp GACATAATCCTGAAAACCCAGTCAGGGGCTGGGTGCACTGTCAGTGAGGAGTTTGCTTTAAAGCAAAAGTaGACCCTCTTTGGGTTCCTC +
Preference number: 2 (lower is better)
Translates to: DIILKTQSGAGCTVSEEFALKQK*TLFGFL
Trigger: GAGGAACCCAAAGAGGGTTCACTTTTGCTTTAAAGC...AAACTCCTCACTGACAGTGCACCCAGCCCCTGACTGGGTTTTCAGGATTATGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375377.2
3UTR-3UTR GCA 90 bp TGCTGTATTCGTACACACAAGTATCGCAGAGGCTTTCCAAGGTCGATGCCAGGACTGCACTGGTCACTTTaGAAGAGATGCTATCCTGAC +
Preference number: 2 (lower is better)
Translates to: CCIRTHKYRRGFPRSMPGLHWSL*KRCYPD
Trigger: GTCAGGATAGCATCTCTTGCAAAGTGACCAGTGCAG...TCCTGGCATCGACCTTGGAAAGCCTCTGCGATACTTGTGTGTACGAATACAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375377.2
3UTR-3UTR CCA 90 bp TTCGGCTTAAGAAACACACTCCCACCCCACATCCCGTCTTTTAAGCTTCATCTCCTTCCAGCTTCTACATaGGGAAGTGGGGCTGATAGA +
Preference number: 2 (lower is better)
Translates to: FGLRNTLPPHIPSFKLHLLPAST*GSGADR
Trigger: TCTATCAGCCCCACTTCCCCATGTAGAAGCTGGAAG...GAGATGAAGCTTAAAAGACGGGATGTGGGGTGGGAGTGTGTTTCTTAAGCCGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375377.2
3UTR-3UTR TCA 90 bp TATCATCTCCCCCTTCTTAGTGTGGTGGGTCCCAGAGTGGACCAACCCACACTCATGGATCATACCTATTaGTTCACATTTCCCCTAAAC +
Preference number: 2 (lower is better)
Translates to: YHLPLLSVVGPRVDQPTLMDHTY*FTFPLN
Trigger: GTTTAGGGGAAATGTGAATCAATAGGTATGATCCAT...GAGTGTGGGTTGGTCCACTCTGGGACCCACCACACTAAGAAGGGGGAGATGATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375377.2
3UTR-3UTR CCA 90 bp TATCATCTCCCCCTTCTTAGTGTGGTGGGTCCCAGAGTGGACCAACCCACACTCTGCTATAAAAACAGATaGTTTCAACGGACGATTGCT +
Preference number: 2 (lower is better)
Translates to: YHLPLLSVVGPRVDQPTLCYKNR*FQRTIA
Trigger: AGCAATCGTCCGTTGAAACCATCTGTTTTTATAGCA...GAGTGTGGGTTGGTCCACTCTGGGACCCACCACACTAAGAAGGGGGAGATGATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000375377.2
3UTR-3UTR CCA 90 bp TATCATCTCCCCCTTCTTAGTGTGGTGGGTCCCAGAGTGGACCAACCCACACTCCATGACAATGTTGGCTaGTTTTCAGAGGGTTATTTT +
Preference number: 2 (lower is better)
Translates to: YHLPLLSVVGPRVDQPTLHDNVG*FSEGYF
Trigger: AAAATAACCCTCTGAAAACCAGCCAACATTGTCATG...GAGTGTGGGTTGGTCCACTCTGGGACCCACCACACTAAGAAGGGGGAGATGATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375377.2
3UTR-3UTR CCA 90 bp TATCGCAGAGGCTTTCCAAGGTCGATGCCAGGAATCTGCAGGAGCCTTGGCTGCATAAGAGCTGAATTCTaGACTGCAGATAAGTGTTTT +
Preference number: 2 (lower is better)
Translates to: YRRGFPRSMPGICRSLGCIRAEF*TADKCF
Trigger: AAAACACTTATCTGCAGTCCAGAATTCAGCTCTTAT...GCAGCCAAGGCTCCTGCAGATTCCTGGCATCGACCTTGGAAAGCCTCTGCGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375377.2
3UTR-3UTR CCA 90 bp TTCGGCTTAAGAAACACACTCCCACCCCACATCCCGTCTTTTAAGCTTCATCTCGCCTCAGCCCTTATTTaGTACTACCAGGTGACTTCA +
Preference number: 2 (lower is better)
Translates to: FGLRNTLPPHIPSFKLHLASALI*YYQVTS
Trigger: TGAAGTCACCTGGTAGTACCAAATAAGGGCTGAGGC...GAGATGAAGCTTAAAAGACGGGATGTGGGGTGGGAGTGTGTTTCTTAAGCCGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375377.2
3UTR-3UTR CCA 90 bp TTCGGCTTAAGAAACACACTCCCACCCCACATCCCGTCTTTTAAGCTTCATCTCCGCAAACGTGATCTCTaGGGGTCACAAGATGAAATG +
Preference number: 2 (lower is better)
Translates to: FGLRNTLPPHIPSFKLHLRKRDL*GSQDEM
Trigger: CATTTCATCTTGTGACCCCCAGAGATCACGTTTGCG...GAGATGAAGCTTAAAAGACGGGATGTGGGGTGGGAGTGTGTTTCTTAAGCCGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375377.2
3UTR-3UTR CCA 90 bp TGCTGTATTCGTACACACAAGTATCGCAGAGGCTTTCCAAGGTCGATGCCAGGACTTTTGCCTCCGAGTTaGGAAAGTAGTTGTTTCAAC +
Preference number: 2 (lower is better)
Translates to: CCIRTHKYRRGFPRSMPGLLPPS*ESSCFN
Trigger: GTTGAAACAACTACTTTCCCAACTCGGAGGCAAAAG...TCCTGGCATCGACCTTGGAAAGCCTCTGCGATACTTGTGTGTACGAATACAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375377.2
3UTR-3UTR TCA 90 bp AGGCGCCTCAGCCCTTATTTGGTACTACCAGGTGACTTCAATGATTCACCAGCTAATCTACCAGCTACTTaGGAATACTCAATTCGCAAC +
Preference number: 2 (lower is better)
Translates to: RRLSPYLVLPGDFNDSPANLPAT*EYSIRN
Trigger: GTTGCGAATTGAGTATTCTCAAGTAGCTGGTAGATT...AGCTGGTGAATCATTGAAGTCACCTGGTAGTACCAAATAAGGGCTGAGGCGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375377.2
3UTR-3UTR TCA 90 bp AGCAGTTATGCACATGGACATAATCCTGAAAACCCAGTCAGGGGCTGGGTGCACCATCACATTTTGGTTTaGGAATCACAGAAGGTACAA +
Preference number: 2 (lower is better)
Translates to: SSYAHGHNPENPVRGWVHHHILV*ESQKVQ
Trigger: TTGTACCTTCTGTGATTCTCAAACCAAAATGTGATG...GTGCACCCAGCCCCTGACTGGGTTTTCAGGATTATGTCCATGTGCATAACTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375377.2
3UTR-3UTR GCA 90 bp TGCTGTATTCGTACACACAAGTATCGCAGAGGCTTTCCAAGGTCGATGCCAGGAATAGATAATACTGAGTaGAAAGCAGACAATGGCGTG +
Preference number: 2 (lower is better)
Translates to: CCIRTHKYRRGFPRSMPGIDNTE*KADNGV
Trigger: CACGCCATTGTCTGCTTTGCACTCAGTATTATCTAT...TCCTGGCATCGACCTTGGAAAGCCTCTGCGATACTTGTGTGTACGAATACAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375377.2
3UTR-3UTR TCA 90 bp TTCGGCTTAAGAAACACACTCCCACCCCACATCCCGTCTTTTAAGCTTCATCTCAATCTTCACCCAGAATaGGAGCAACACCAAACTATT +
Preference number: 2 (lower is better)
Translates to: FGLRNTLPPHIPSFKLHLNLHPE*EQHQTI
Trigger: AATAGTTTGGTGTTGCTCTCATTCTGGGTGAAGATT...GAGATGAAGCTTAAAAGACGGGATGTGGGGTGGGAGTGTGTTTCTTAAGCCGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375377.2
3UTR-3UTR CCA 90 bp TGCTGTATTCGTACACACAAGTATCGCAGAGGCTTTCCAAGGTCGATGCCAGGAAAAATGATCACAGTCTaGTTTCTGAGTCATCTGAGT +
Preference number: 2 (lower is better)
Translates to: CCIRTHKYRRGFPRSMPGKMITV*FLSHLS
Trigger: ACTCAGATGACTCAGAAACCAGACTGTGATCATTTT...TCCTGGCATCGACCTTGGAAAGCCTCTGCGATACTTGTGTGTACGAATACAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375377.2
3UTR CAA 90 bp TTCCAGCAGCAGAAGGCCAAATTGATTAGAAATGGATCATACCTATaGATTCACATTTCCCCTAAACTGAAAGTGCTGAAACACCGGGCA +
Preference number: 2 (lower is better)
Translates to: FQQQKAKLIRNGSYL*IHISPKLKVLKHRA
Trigger: TGCCCGGTGTTTCAGCACTTTCAGTTTAGGGGAAATGTGAATCAATAGGTATGATCCATTTCTAATCAATTTGGCCTTCTGCTGCTGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375377.2
3UTR-3UTR GCA 90 bp TTCGGCTTAAGAAACACACTCCCACCCCACATCCCGTCTTTTAAGCTTCATCTCACTTCCTTAAAAATCTaGCGCCTAACAATTGTTTAC +
Preference number: 2 (lower is better)
Translates to: FGLRNTLPPHIPSFKLHLTSLKI*RLTIVY
Trigger: GTAAACAATTGTTAGGCGGCAGATTTTTAAGGAAGT...GAGATGAAGCTTAAAAGACGGGATGTGGGGTGGGAGTGTGTTTCTTAAGCCGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000375377.2
3UTR GCA 72 bp TATCGCAGAGGCTTTCCAAGGTCGATGCCAGGAATCTaGAGGAGCCTTGGCTGCCTTCCCACACTGCTGATG +
Preference number: 3 (lower is better)
Translates to: YRRGFPRSMPGI*RSLGCLPTLLM
Trigger: CATCAGCAGTGTGGGAAGGCAGCCAAGGCTCCTGCAGATTCCTGGCATCGACCTTGGAAAGCCTCTGCGATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375377.2
3UTR GCA 72 bp AGCCAGTGTCCCAAACTCCTTCACAAGAGCATGGACTaGAGGCCATGGAGACACAGAGGGGAGCACACCATT +
Preference number: 3 (lower is better)
Translates to: SQCPKLLHKSMD*RPWRHRGEHTI
Trigger: AATGGTGTGCTCCCCTCTGTGTCTCCATGGCCTGCAGTCCATGCTCTTGTGAAGGAGTTTGGGACACTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375377.2
3UTR GCA 72 bp CCAAGGTCGATGCCAGGAATCTGCAGGAGCCTTGGCTaGCTTCCCACACTGCTGATGAACCAAGGACTGTTT +
Preference number: 3 (lower is better)
Translates to: PRSMPGICRSLG*LPTLLMNQGLF
Trigger: AAACAGTCCTTGGTTCATCAGCAGTGTGGGAAGGCAGCCAAGGCTCCTGCAGATTCCTGGCATCGACCTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375377.2
3UTR TCA 72 bp AAAGGGTTCCTCCTAACCCCTATCAAAGCATGGGGATaGACGGCCAGACAATCTGGGCTTGCCTTTGGGTTT +
Preference number: 3 (lower is better)
Translates to: KGFLLTPIKAWG*TARQSGLAFGF
Trigger: AAACCCAAAGGCAAGCCCAGATTGTCTGGCCGTTCATCCCCATGCTTTGATAGGGGTTAGGAGGAACCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375377.2
3UTR CCA 72 bp ACCCCACAAAGACCTCCAGGCGCCTCAGCCCTTATTTaGTACTACCAGGTGACTTCAATGATTCACCAGCTA +
Preference number: 3 (lower is better)
Translates to: TPQRPPGASALI*YYQVTSMIHQL
Trigger: TAGCTGGTGAATCATTGAAGTCACCTGGTAGTACCAAATAAGGGCTGAGGCGCCTGGAGGTCTTTGTGGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375377.2
3UTR-3UTR CAA 90 bp TATCATCTCCCCCTTCTTAGTGTGGTGGGTCCCAGAGTGGACCAACCCACACTCGCTAGATCTTCCACATaGAAATCTTCACCCAGAATG +
Preference number: 3 (lower is better)
Translates to: YHLPLLSVVGPRVDQPTLARSST*KSSPRM
Trigger: CATTCTGGGTGAAGATTTCAATGTGGAAGATCTAGC...GAGTGTGGGTTGGTCCACTCTGGGACCCACCACACTAAGAAGGGGGAGATGATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375377.2
3UTR GCA 72 bp AAACAGAGACCACAGAACAAGGACCTCCCTGTCCTCTaGTGTATTCGTACACACAAGTATCGCAGAGGCTTT +
Preference number: 3 (lower is better)
Translates to: KQRPQNKDLPVL*CIRTHKYRRGF
Trigger: AAAGCCTCTGCGATACTTGTGTGTACGAATACAGCAGAGGACAGGGAGGTCCTTGTTCTGTGGTCTCTGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375377.2
3UTR-3UTR CAA 90 bp TGCTGTATTCGTACACACAAGTATCGCAGAGGCTTTCCAAGGTCGATGCCAGGAAAAAGTGAACCCTCTTaGGGTTCCTCTCACACAAAG +
Preference number: 3 (lower is better)
Translates to: CCIRTHKYRRGFPRSMPGKSEPS*GSSHTK
Trigger: CTTTGTGTGAGAGGAACCCAAAGAGGGTTCACTTTT...TCCTGGCATCGACCTTGGAAAGCCTCTGCGATACTTGTGTGTACGAATACAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375377.2
3UTR-3UTR CAA 90 bp AGGCGCCTCAGCCCTTATTTGGTACTACCAGGTGACTTCAATGATTCACCAGCTATAAAAGTAGCAGAGTaGTCAGTGGGTAAGGGACAG +
Preference number: 3 (lower is better)
Translates to: RRLSPYLVLPGDFNDSPAIKVAE*SVGKGQ
Trigger: CTGTCCCTTACCCACTGACAACTCTGCTACTTTTAT...AGCTGGTGAATCATTGAAGTCACCTGGTAGTACCAAATAAGGGCTGAGGCGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375377.2
3UTR-3UTR CAA 90 bp AGGCGCCTCAGCCCTTATTTGGTACTACCAGGTGACTTCAATGATTCACCAGCTGGGAAGAGGATCTTTTaGTTTCCCGCACTTATTGCT +
Preference number: 3 (lower is better)
Translates to: RRLSPYLVLPGDFNDSPAGKRIF*FPALIA
Trigger: AGCAATAAGTGCGGGAAACAAAAAGATCCTCTTCCC...AGCTGGTGAATCATTGAAGTCACCTGGTAGTACCAAATAAGGGCTGAGGCGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375377.2
3UTR CCA 72 bp AGGATGCTAAAAACTCAGCAGCTTCCAGCTTCTACATaGGGAAGTGGGGCTGATAGACTAAATCTACCAGCT +
Preference number: 3 (lower is better)
Translates to: RMLKTQQLPAST*GSGADRLNLPA
Trigger: AGCTGGTAGATTTAGTCTATCAGCCCCACTTCCCCATGTAGAAGCTGGAAGCTGCTGAGTTTTTAGCATCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375377.2
3UTR-3UTR CAA 90 bp GACATAATCCTGAAAACCCAGTCAGGGGCTGGGTGCACTGTCAGTGAGGAGTTTCTGCAGATAAGTGTTTaGAAAAGGCTTGGAAAGATT +
Preference number: 3 (lower is better)
Translates to: DIILKTQSGAGCTVSEEFLQISV*KRLGKI
Trigger: AATCTTTCCAAGCCTTTTCAAAACACTTATCTGCAG...AAACTCCTCACTGACAGTGCACCCAGCCCCTGACTGGGTTTTCAGGATTATGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375377.2
3UTR-3UTR CAA 90 bp GACATAATCCTGAAAACCCAGTCAGGGGCTGGGTGCACTGTCAGTGAGGAGTTTTATACCTTCTTACGTTaGCATTTAAAGAGGGAAGAC +
Preference number: 3 (lower is better)
Translates to: DIILKTQSGAGCTVSEEFYTFLR*HLKRED
Trigger: GTCTTCCCTCTTTAAATGCAAACGTAAGAAGGTATA...AAACTCCTCACTGACAGTGCACCCAGCCCCTGACTGGGTTTTCAGGATTATGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375377.2
3UTR-3UTR CAA 90 bp AGCAGTTATGCACATGGACATAATCCTGAAAACCCAGTCAGGGGCTGGGTGCACGAGTTTTTCTGTACTTaGCAGAAACATGAGGTTGAA +
Preference number: 3 (lower is better)
Translates to: SSYAHGHNPENPVRGWVHEFFCT*QKHEVE
Trigger: TTCAACCTCATGTTTCTGCAAAGTACAGAAAAACTC...GTGCACCCAGCCCCTGACTGGGTTTTCAGGATTATGTCCATGTGCATAACTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000375377.2
3UTR TCA 72 bp GGAAGTGGGGCTGATAGACTAAATCTACCAGCTACTTaGGAATACTCAATTCGCAACGGAATGCAAGCTCCA +
Preference number: 3 (lower is better)
Translates to: GSGADRLNLPAT*EYSIRNGMQAP
Trigger: TGGAGCTTGCATTCCGTTGCGAATTGAGTATTCTCAAGTAGCTGGTAGATTTAGTCTATCAGCCCCACTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375377.2
3UTR GCA 72 bp CATATGCTTCTCAACTTGAACTTGCCTTTGTCTCCTTaGTCCGTGACAATGAATGTCTCACATCTCGGCTCT +
Preference number: 3 (lower is better)
Translates to: HMLLNLNLPLSP*SVTMNVSHLGS
Trigger: AGAGCCGAGATGTGAGACATTCATTGTCACGGAGCAAGGAGACAAAGGCAAGTTCAAGTTGAGAAGCATATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375377.2
3UTR-3UTR CAA 90 bp TGCTGTATTCGTACACACAAGTATCGCAGAGGCTTTCCAAGGTCGATGCCAGGAAAATCTACCAGCTACTaGAGAATACTCAATTCGCAA +
Preference number: 3 (lower is better)
Translates to: CCIRTHKYRRGFPRSMPGKSTSY*RILNSQ
Trigger: TTGCGAATTGAGTATTCTCAAGTAGCTGGTAGATTT...TCCTGGCATCGACCTTGGAAAGCCTCTGCGATACTTGTGTGTACGAATACAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375377.2
3UTR TCA 72 bp GGGCAGCAAAAGTTCTACTTAGAATTTCCACGTGAATaGAACCCGCAACCTACAACTCTGCTAAGGAAACCA +
Preference number: 3 (lower is better)
Translates to: GQQKFYLEFPRE*NPQPTTLLRKP
Trigger: TGGTTTCCTTAGCAGAGTTGTAGGTTGCGGGTTTCATTCACGTGGAAATTCTAAGTAGAACTTTTGCTGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375377.2
3UTR TCA 72 bp AATGGGGCAGCAAAAGTTCTACTTAGAATTTCCACGTaGATGAAACCCGCAACCTACAACTCTGCTAAGGAA +
Preference number: 3 (lower is better)
Translates to: NGAAKVLLRIST*MKPATYNSAKE
Trigger: TTCCTTAGCAGAGTTGTAGGTTGCGGGTTTCATTCACGTGGAAATTCTAAGTAGAACTTTTGCTGCCCCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375377.2
3UTR-3UTR CAA 90 bp AGTAGTTGTTTCAACAGATCAGCTTCATCCTTTTTCTTCAGAAGCCCCAAACCGCAGCAGAAGGCCAAATaGATTAGAAATGGATCATAC +
Preference number: 3 (lower is better)
Translates to: SSCFNRSASSFFFRSPKPQQKAK*IRNGSY
Trigger: GTATGATCCATTTCTAATCAATTTGGCCTTCTGCTG...CGGTTTGGGGCTTCTGAAGAAAAAGGATGAAGCTGATCTGTTGAAACAACTACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR CCA 90 bp TATCATCTCCCCCTTCTTAGTGTGGTGGGTCCCAGAGTGGACCAACCCACACTCCTCTGGGGCTCCCCGTaGCCTCTCGGTGTGCTGCGG +
Preference number: 4 (lower is better)
Translates to: YHLPLLSVVGPRVDQPTLLWGSP*PLGVLR
Trigger: CCGCAGCACACCGAGAGGCCACGGGGAGCCCCAGAG...GAGTGTGGGTTGGTCCACTCTGGGACCCACCACACTAAGAAGGGGGAGATGATA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR TCA 90 bp TATCGCAGAGGCTTTCCAAGGTCGATGCCAGGAATCTGCAGGAGCCTTGGCTGCCGGGGGCGATCTGTATaGGGGCGGAGGCACGTACAC +
Preference number: 4 (lower is better)
Translates to: YRRGFPRSMPGICRSLGCRGRSV*GRRHVH
Trigger: GTGTACGTGCCTCCGCCCTCATACAGATCGCCCCCG...GCAGCCAAGGCTCCTGCAGATTCCTGGCATCGACCTTGGAAAGCCTCTGCGATA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR CCA 90 bp TATCGCAGAGGCTTTCCAAGGTCGATGCCAGGAATCTGCAGGAGCCTTGGCTGCCCGTTCTGCAGGCCCTaGCCTGCTCGTGTCCCAGTC +
Preference number: 4 (lower is better)
Translates to: YRRGFPRSMPGICRSLGCPFCRP*PARVPV
Trigger: GACTGGGACACGAGCAGGCCAGGGCCTGCAGAACGG...GCAGCCAAGGCTCCTGCAGATTCCTGGCATCGACCTTGGAAAGCCTCTGCGATA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR CCA 90 bp TATCATCTCCCCCTTCTTAGTGTGGTGGGTCCCAGAGTGGACCAACCCACACTCAAAGCGGCCCGGGGATaGAGGCCAGGCACGTGGGTG +
Preference number: 4 (lower is better)
Translates to: YHLPLLSVVGPRVDQPTLKAARG*RPGTWV
Trigger: CACCCACGTGCCTGGCCTCCATCCCCGGGCCGCTTT...GAGTGTGGGTTGGTCCACTCTGGGACCCACCACACTAAGAAGGGGGAGATGATA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR GCA 90 bp TATCATCTCCCCCTTCTTAGTGTGGTGGGTCCCAGAGTGGACCAACCCACACTCGGCCTCTCGGTGTGCTaGGGCGGCTTTCGGAGTCAC +
Preference number: 4 (lower is better)
Translates to: YHLPLLSVVGPRVDQPTLGLSVC*GGFRSH
Trigger: GTGACTCCGAAAGCCGCCGCAGCACACCGAGAGGCC...GAGTGTGGGTTGGTCCACTCTGGGACCCACCACACTAAGAAGGGGGAGATGATA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR GCA 90 bp TATCGCAGAGGCTTTCCAAGGTCGATGCCAGGAATCTGCAGGAGCCTTGGCTGCCCACCGCCACCTCAATaGCCAGGATCCTTGCAGCCC +
Preference number: 4 (lower is better)
Translates to: YRRGFPRSMPGICRSLGCPPPPQ*PGSLQP
Trigger: GGGCTGCAAGGATCCTGGGCATTGAGGTGGCGGTGG...GCAGCCAAGGCTCCTGCAGATTCCTGGCATCGACCTTGGAAAGCCTCTGCGATA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR CCA 90 bp TATCGCAGAGGCTTTCCAAGGTCGATGCCAGGAATCTGCAGGAGCCTTGGCTGCGAGTGGCCCAATCTCTaGGCACGGTCCCCACTGCCA +
Preference number: 4 (lower is better)
Translates to: YRRGFPRSMPGICRSLGCEWPNL*ARSPLP
Trigger: TGGCAGTGGGGACCGTGCCCAGAGATTGGGCCACTC...GCAGCCAAGGCTCCTGCAGATTCCTGGCATCGACCTTGGAAAGCCTCTGCGATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR TCA 90 bp TATCGCAGAGGCTTTCCAAGGTCGATGCCAGGAATCTGCAGGAGCCTTGGCTGCCCCAGGGACGACGGCTaGCCGGTTTCAGGAGAAACT +
Preference number: 4 (lower is better)
Translates to: YRRGFPRSMPGICRSLGCPRDDG*PVSGET
Trigger: AGTTTCTCCTGAAACCGGTCAGCCGTCGTCCCTGGG...GCAGCCAAGGCTCCTGCAGATTCCTGGCATCGACCTTGGAAAGCCTCTGCGATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR TCA 90 bp TATCGCAGAGGCTTTCCAAGGTCGATGCCAGGAATCTGCAGGAGCCTTGGCTGCAGCTTGAGGCTGCAGTaGGCCGTGACTGCACCACTG +
Preference number: 4 (lower is better)
Translates to: YRRGFPRSMPGICRSLGCSLRLQ*AVTAPL
Trigger: CAGTGGTGCAGTCACGGCTCACTGCAGCCTCAAGCT...GCAGCCAAGGCTCCTGCAGATTCCTGGCATCGACCTTGGAAAGCCTCTGCGATA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR TCA 90 bp AGTGTCCCAAACTCCTTCACAAGAGCATGGACTGCAGGCCATGGAGACACAGAGCTGATCTGGGGGCGATaGCTGCAGCCGGCAATCGGC +
Preference number: 4 (lower is better)
Translates to: SVPNSFTRAWTAGHGDTELIWGR*LQPAIG
Trigger: GCCGATTGCCGGCTGCAGTCATCGCCCCCAGATCAG...CTCTGTGTCTCCATGGCCTGCAGTCCATGCTCTTGTGAAGGAGTTTGGGACACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR TCA 90 bp TATCGCAGAGGCTTTCCAAGGTCGATGCCAGGAATCTGCAGGAGCCTTGGCTGCCATCCTGTACCAGCCTaGTCTGGGGGCGATGACTGC +
Preference number: 4 (lower is better)
Translates to: YRRGFPRSMPGICRSLGCHPVPA*SGGDDC
Trigger: GCAGTCATCGCCCCCAGATCAGGCTGGTACAGGATG...GCAGCCAAGGCTCCTGCAGATTCCTGGCATCGACCTTGGAAAGCCTCTGCGATA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR GCA 90 bp AGTGTCCCAAACTCCTTCACAAGAGCATGGACTGCAGGCCATGGAGACACAGAGTGTCCCAGTCCTCGCTaGCTGGCGCCCCTTGGGGTT +
Preference number: 4 (lower is better)
Translates to: SVPNSFTRAWTAGHGDTECPSPR*LAPLGV
Trigger: AACCCCAAGGGGCGCCAGGCAGCGAGGACTGGGACA...CTCTGTGTCTCCATGGCCTGCAGTCCATGCTCTTGTGAAGGAGTTTGGGACACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR GCA 90 bp CTGCCTTCCCACACTGCTGATGAACCAAGGACTGTTTCGACAGGCAGGTTGCTACGTGGGTGGCCAGGCTaGAGCTCCTCACTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: LPSHTADEPRTVSTGRLLRGWPG*SSSLQL
Trigger: GAGCTGGAGTGAGGAGCTGCAGCCTGGCCACCCACG...TAGCAACCTGCCTGTCGAAACAGTCCTTGGTTCATCAGCAGTGTGGGAAGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR GCA 90 bp AGCAGTTATGCACATGGACATAATCCTGAAAACCCAGTCAGGGGCTGGGTGCACCAGGCGGTCAGGGTCTaGTCTCCTAGGCGGGGAGGC +
Preference number: 4 (lower is better)
Translates to: SSYAHGHNPENPVRGWVHQAVRV*SPRRGG
Trigger: GCCTCCCCGCCTAGGAGAGCAGACCCTGACCGCCTG...GTGCACCCAGCCCCTGACTGGGTTTTCAGGATTATGTCCATGTGCATAACTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR CCA 90 bp TATCGCAGAGGCTTTCCAAGGTCGATGCCAGGAATCTGCAGGAGCCTTGGCTGCTGGTGGGTCCCAGAGTaGACCAACCCACACTCCTGG +
Preference number: 4 (lower is better)
Translates to: YRRGFPRSMPGICRSLGCWWVPE*TNPHSW
Trigger: CCAGGAGTGTGGGTTGGTCCACTCTGGGACCCACCA...GCAGCCAAGGCTCCTGCAGATTCCTGGCATCGACCTTGGAAAGCCTCTGCGATA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR GCA 90 bp TGCTGTATTCGTACACACAAGTATCGCAGAGGCTTTCCAAGGTCGATGCCAGGACTGCAGGCCCTGGCCTaGTCGTGTCCCAGTCCTCGC +
Preference number: 4 (lower is better)
Translates to: CCIRTHKYRRGFPRSMPGLQALA*SCPSPR
Trigger: GCGAGGACTGGGACACGAGCAGGCCAGGGCCTGCAG...TCCTGGCATCGACCTTGGAAAGCCTCTGCGATACTTGTGTGTACGAATACAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR GCA 90 bp AGTGTCCCAAACTCCTTCACAAGAGCATGGACTGCAGGCCATGGAGACACAGAGGCACCAGGGAGCAGCTaGGAACTTTGGGGCTCCTCG +
Preference number: 4 (lower is better)
Translates to: SVPNSFTRAWTAGHGDTEAPGSS*ELWGSS
Trigger: CGAGGAGCCCCAAAGTTCGCAGCTGCTCCCTGGTGC...CTCTGTGTCTCCATGGCCTGCAGTCCATGCTCTTGTGAAGGAGTTTGGGACACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR GCA 90 bp AGCAGTTATGCACATGGACATAATCCTGAAAACCCAGTCAGGGGCTGGGTGCACGGGCACGGTCCCCACTaGCAGGAGACACAAGGCCTC +
Preference number: 4 (lower is better)
Translates to: SSYAHGHNPENPVRGWVHGHGPH*QETQGL
Trigger: GAGGCCTTGTGTCTCCTGGCAGTGGGGACCGTGCCC...GTGCACCCAGCCCCTGACTGGGTTTTCAGGATTATGTCCATGTGCATAACTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR GCA 90 bp CTGCCTTCCCACACTGCTGATGAACCAAGGACTGTTTCGACAGGCAGGTTGCTACTCACATCTCGGCTCTaGTGCGGGGCAGGGGTGAAG +
Preference number: 4 (lower is better)
Translates to: LPSHTADEPRTVSTGRLLLTSRL*CGAGVK
Trigger: CTTCACCCCTGCCCCGCAGCAGAGCCGAGATGTGAG...TAGCAACCTGCCTGTCGAAACAGTCCTTGGTTCATCAGCAGTGTGGGAAGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR GCA 90 bp TATCATCTCCCCCTTCTTAGTGTGGTGGGTCCCAGAGTGGACCAACCCACACTCGCAGTGAGCCGTGACTaGACCACTGCACTCCAGGCT +
Preference number: 4 (lower is better)
Translates to: YHLPLLSVVGPRVDQPTLAVSRD*TTALQA
Trigger: AGCCTGGAGTGCAGTGGTGCAGTCACGGCTCACTGC...GAGTGTGGGTTGGTCCACTCTGGGACCCACCACACTAAGAAGGGGGAGATGATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR CCA 90 bp TATCATCTCCCCCTTCTTAGTGTGGTGGGTCCCAGAGTGGACCAACCCACACTCTGCTCCCTCGGCTTCTaGCTCCTGGCTTCTTGCCGT +
Preference number: 4 (lower is better)
Translates to: YHLPLLSVVGPRVDQPTLCSLGF*LLASCR
Trigger: ACGGCAAGAAGCCAGGAGCCAGAAGCCGAGGGAGCA...GAGTGTGGGTTGGTCCACTCTGGGACCCACCACACTAAGAAGGGGGAGATGATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR CCA 90 bp TATCGCAGAGGCTTTCCAAGGTCGATGCCAGGAATCTGCAGGAGCCTTGGCTGCTCCTCCAACTTCCCATaGACCCTCCCTCACGTGGAC +
Preference number: 4 (lower is better)
Translates to: YRRGFPRSMPGICRSLGCSSNFP*TLPHVD
Trigger: GTCCACGTGAGGGAGGGTCCATGGGAAGTTGGAGGA...GCAGCCAAGGCTCCTGCAGATTCCTGGCATCGACCTTGGAAAGCCTCTGCGATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR CCA 90 bp AGTGTCCCAAACTCCTTCACAAGAGCATGGACTGCAGGCCATGGAGACACAGAGCCAGTGTGCCCGTGCTaGCTGCCTCTCACATCAGGC +
Preference number: 4 (lower is better)
Translates to: SVPNSFTRAWTAGHGDTEPVCPC*LPLTSG
Trigger: GCCTGATGTGAGAGGCAGCCAGCACGGGCACACTGG...CTCTGTGTCTCCATGGCCTGCAGTCCATGCTCTTGTGAAGGAGTTTGGGACACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR CCA 90 bp TATCGCAGAGGCTTTCCAAGGTCGATGCCAGGAATCTGCAGGAGCCTTGGCTGCGGATCCTTGCAGCCCTaGCTTGCAAGGACTCACCTG +
Preference number: 4 (lower is better)
Translates to: YRRGFPRSMPGICRSLGCGSLQP*LARTHL
Trigger: CAGGTGAGTCCTTGCAAGCCAGGGCTGCAAGGATCC...GCAGCCAAGGCTCCTGCAGATTCCTGGCATCGACCTTGGAAAGCCTCTGCGATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR CCA 90 bp TATCGCAGAGGCTTTCCAAGGTCGATGCCAGGAATCTGCAGGAGCCTTGGCTGCGACACAGAGAGTGAGTaGCCCAATCTCTGGGCACGG +
Preference number: 4 (lower is better)
Translates to: YRRGFPRSMPGICRSLGCDTESE*PNLWAR
Trigger: CCGTGCCCAGAGATTGGGCCACTCACTCTCTGTGTC...GCAGCCAAGGCTCCTGCAGATTCCTGGCATCGACCTTGGAAAGCCTCTGCGATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR TCA 90 bp TATCATCTCCCCCTTCTTAGTGTGGTGGGTCCCAGAGTGGACCAACCCACACTCTCCAGCTTTCCAGGCTaGCGTTCTGCCACTTGGCAG +
Preference number: 4 (lower is better)
Translates to: YHLPLLSVVGPRVDQPTLSSFPG*RSATWQ
Trigger: CTGCCAAGTGGCAGAACGTCAGCCTGGAAAGCTGGA...GAGTGTGGGTTGGTCCACTCTGGGACCCACCACACTAAGAAGGGGGAGATGATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR TCA 90 bp TATCATCTCCCCCTTCTTAGTGTGGTGGGTCCCAGAGTGGACCAACCCACACTCGGTGCTCTCGCCCTGTaGGTAAGGGGAGGAAACTTG +
Preference number: 4 (lower is better)
Translates to: YHLPLLSVVGPRVDQPTLGALAL*VRGGNL
Trigger: CAAGTTTCCTCCCCTTACTCACAGGGCGAGAGCACC...GAGTGTGGGTTGGTCCACTCTGGGACCCACCACACTAAGAAGGGGGAGATGATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR TCA 90 bp AGTGTCCCAAACTCCTTCACAAGAGCATGGACTGCAGGCCATGGAGACACAGAGGTTCTTGCCCAGGGGTaGGCCCCACAGACCGTAAGT +
Preference number: 4 (lower is better)
Translates to: SVPNSFTRAWTAGHGDTEVLAQG*APQTVS
Trigger: ACTTACGGTCTGTGGGGCTCACCCCTGGGCAAGAAC...CTCTGTGTCTCCATGGCCTGCAGTCCATGCTCTTGTGAAGGAGTTTGGGACACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR GCA 90 bp AGTGTCCCAAACTCCTTCACAAGAGCATGGACTGCAGGCCATGGAGACACAGAGGCCTCCAGGTTTTCGTaGTCCCTCGGCTTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: SVPNSFTRAWTAGHGDTEASRFS*SLGFWL
Trigger: GAGCCAGAAGCCGAGGGAGCACGAAAACCTGGAGGC...CTCTGTGTCTCCATGGCCTGCAGTCCATGCTCTTGTGAAGGAGTTTGGGACACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR GCA 90 bp AGTGTCCCAAACTCCTTCACAAGAGCATGGACTGCAGGCCATGGAGACACAGAGTGTGCCCGTGCTGGCTaGCTCTCACATCAGGCCACT +
Preference number: 4 (lower is better)
Translates to: SVPNSFTRAWTAGHGDTECARAG*LSHQAT
Trigger: AGTGGCCTGATGTGAGAGGCAGCCAGCACGGGCACA...CTCTGTGTCTCCATGGCCTGCAGTCCATGCTCTTGTGAAGGAGTTTGGGACACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR GCA 90 bp CTGCCTTCCCACACTGCTGATGAACCAAGGACTGTTTCGACAGGCAGGTTGCTATCTGGGGGCGATGACTaGAGCCGGCAATCGGCCATT +
Preference number: 4 (lower is better)
Translates to: LPSHTADEPRTVSTGRLLSGGDD*SRQSAI
Trigger: AATGGCCGATTGCCGGCTGCAGTCATCGCCCCCAGA...TAGCAACCTGCCTGTCGAAACAGTCCTTGGTTCATCAGCAGTGTGGGAAGGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR CCA 90 bp GACATAATCCTGAAAACCCAGTCAGGGGCTGGGTGCACTGTCAGTGAGGAGTTTCTGCCTGGCGCCCCTTaGGGTTATCCTCGCGTGATG +
Preference number: 4 (lower is better)
Translates to: DIILKTQSGAGCTVSEEFLPGAP*GYPRVM
Trigger: CATCACGCGAGGATAACCCCAAGGGGCGCCAGGCAG...AAACTCCTCACTGACAGTGCACCCAGCCCCTGACTGGGTTTTCAGGATTATGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR CCA 90 bp TGCTGTATTCGTACACACAAGTATCGCAGAGGCTTTCCAAGGTCGATGCCAGGAAAGGAGGCTGACCGCTaGCCCCAGCCTTCTCGGTCG +
Preference number: 4 (lower is better)
Translates to: CCIRTHKYRRGFPRSMPGKEADR*PQPSRS
Trigger: CGACCGAGAAGGCTGGGGCCAGCGGTCAGCCTCCTT...TCCTGGCATCGACCTTGGAAAGCCTCTGCGATACTTGTGTGTACGAATACAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR CCA 90 bp TATCATCTCCCCCTTCTTAGTGTGGTGGGTCCCAGAGTGGACCAACCCACACTCTTTGGCGTCGGTGCCTaGTCCACGGACAAGGAAGTC +
Preference number: 4 (lower is better)
Translates to: YHLPLLSVVGPRVDQPTLFGVGA*STDKEV
Trigger: GACTTCCTTGTCCGTGGACCAGGCACCGACGCCAAA...GAGTGTGGGTTGGTCCACTCTGGGACCCACCACACTAAGAAGGGGGAGATGATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR CCA 90 bp AGTGTCCCAAACTCCTTCACAAGAGCATGGACTGCAGGCCATGGAGACACAGAGTCCTCGGCGTCCTCCTaGGAGTCGGCATTCCTGAAG +
Preference number: 4 (lower is better)
Translates to: SVPNSFTRAWTAGHGDTESSASS*ESAFLK
Trigger: CTTCAGGAATGCCGACTCCCAGGAGGACGCCGAGGA...CTCTGTGTCTCCATGGCCTGCAGTCCATGCTCTTGTGAAGGAGTTTGGGACACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR CCA 90 bp GACATAATCCTGAAAACCCAGTCAGGGGCTGGGTGCACTGTCAGTGAGGAGTTTCGGCCTGGCCCCTTGTaGTGGCCTTCAATTCCTCGG +
Preference number: 4 (lower is better)
Translates to: DIILKTQSGAGCTVSEEFRPGPL*WPSIPR
Trigger: CCGAGGAATTGAAGGCCACCACAAGGGGCCAGGCCG...AAACTCCTCACTGACAGTGCACCCAGCCCCTGACTGGGTTTTCAGGATTATGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR TCA 90 bp GACATAATCCTGAAAACCCAGTCAGGGGCTGGGTGCACTGTCAGTGAGGAGTTTTTACCAGTCGGGGGATaGGAGGACCATGCTGAGGGG +
Preference number: 4 (lower is better)
Translates to: DIILKTQSGAGCTVSEEFLPVGG*EDHAEG
Trigger: CCCCTCAGCATGGTCCTCTCATCCCCCGACTGGTAA...AAACTCCTCACTGACAGTGCACCCAGCCCCTGACTGGGTTTTCAGGATTATGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR TCA 90 bp AGGCGCCTCAGCCCTTATTTGGTACTACCAGGTGACTTCAATGATTCACCAGCTAGCCGTCATAGGCAGTaGCAGGTCGGGGATGTGCGG +
Preference number: 4 (lower is better)
Translates to: RRLSPYLVLPGDFNDSPASRHRQ*QVGDVR
Trigger: CCGCACATCCCCGACCTGTCACTGCCTATGACGGCT...AGCTGGTGAATCATTGAAGTCACCTGGTAGTACCAAATAAGGGCTGAGGCGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR TCA 90 bp AGCAGTTATGCACATGGACATAATCCTGAAAACCCAGTCAGGGGCTGGGTGCACTCCTCCTGTCTGCAGTaGGCACGGTTCTCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: SSYAHGHNPENPVRGWVHSSCLQ*ARFSCC
Trigger: GCAGCAGGAGAACCGTGCTCACTGCAGACAGGAGGA...GTGCACCCAGCCCCTGACTGGGTTTTCAGGATTATGTCCATGTGCATAACTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR TCA 90 bp TATCGCAGAGGCTTTCCAAGGTCGATGCCAGGAATCTGCAGGAGCCTTGGCTGCATCAAAGCATGGGGATaGACGGCCAGACAATCTGGG +
Preference number: 4 (lower is better)
Translates to: YRRGFPRSMPGICRSLGCIKAWG*TARQSG
Trigger: CCCAGATTGTCTGGCCGTTCATCCCCATGCTTTGAT...GCAGCCAAGGCTCCTGCAGATTCCTGGCATCGACCTTGGAAAGCCTCTGCGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR GCA 90 bp TATCGCAGAGGCTTTCCAAGGTCGATGCCAGGAATCTGCAGGAGCCTTGGCTGCACATTTTGGACTCAATaGTGCACGACTCGGCCCTCC +
Preference number: 4 (lower is better)
Translates to: YRRGFPRSMPGICRSLGCTFWTQ*CTTRPS
Trigger: GGAGGGCCGAGTCGTGCAGCATTGAGTCCAAAATGT...GCAGCCAAGGCTCCTGCAGATTCCTGGCATCGACCTTGGAAAGCCTCTGCGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR GCA 90 bp TATCATCTCCCCCTTCTTAGTGTGGTGGGTCCCAGAGTGGACCAACCCACACTCGCTTTCCAAGGTCGATaGCAGGAATCTGCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: YHLPLLSVVGPRVDQPTLAFQGR*QESAGA
Trigger: GGCTCCTGCAGATTCCTGGCATCGACCTTGGAAAGC...GAGTGTGGGTTGGTCCACTCTGGGACCCACCACACTAAGAAGGGGGAGATGATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR CCA 90 bp TGCTGTATTCGTACACACAAGTATCGCAGAGGCTTTCCAAGGTCGATGCCAGGACTGGAACCATGGTGGTaGCAGGACCCAGCACGAGCG +
Preference number: 4 (lower is better)
Translates to: CCIRTHKYRRGFPRSMPGLEPWW*QDPARA
Trigger: CGCTCGTGCTGGGTCCTGCCACCACCATGGTTCCAG...TCCTGGCATCGACCTTGGAAAGCCTCTGCGATACTTGTGTGTACGAATACAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR CCA 90 bp AGTGTCCCAAACTCCTTCACAAGAGCATGGACTGCAGGCCATGGAGACACAGAGTCGGCTTCTGGCTCCTaGCTTCTTGCCGTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: SVPNSFTRAWTAGHGDTESASGS*LLAVLF
Trigger: GAAGAGGACGGCAAGAAGCCAGGAGCCAGAAGCCGA...CTCTGTGTCTCCATGGCCTGCAGTCCATGCTCTTGTGAAGGAGTTTGGGACACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR CCA 90 bp AGCAGTTATGCACATGGACATAATCCTGAAAACCCAGTCAGGGGCTGGGTGCACTGGACAGGCAGGCTGTaGGCTTGGGCCATTCCTCTG +
Preference number: 4 (lower is better)
Translates to: SSYAHGHNPENPVRGWVHWTGRL*AWAIPL
Trigger: CAGAGGAATGGCCCAAGCCCACAGCCTGCCTGTCCA...GTGCACCCAGCCCCTGACTGGGTTTTCAGGATTATGTCCATGTGCATAACTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR CCA 90 bp AGTGTCCCAAACTCCTTCACAAGAGCATGGACTGCAGGCCATGGAGACACAGAGGGCAGAGCTCATGCCTaGGGACATAGGCGTCCATCT +
Preference number: 4 (lower is better)
Translates to: SVPNSFTRAWTAGHGDTEGRAHA*GHRRPS
Trigger: AGATGGACGCCTATGTCCCCAGGCATGAGCTCTGCC...CTCTGTGTCTCCATGGCCTGCAGTCCATGCTCTTGTGAAGGAGTTTGGGACACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR CCA 90 bp TTCGGCTTAAGAAACACACTCCCACCCCACATCCCGTCTTTTAAGCTTCATCTCACAGCCACCGGGGGCTaGAATCGGCCAAGACCAGGC +
Preference number: 4 (lower is better)
Translates to: FGLRNTLPPHIPSFKLHLTATGG*NRPRPG
Trigger: GCCTGGTCTTGGCCGATTCCAGCCCCCGGTGGCTGT...GAGATGAAGCTTAAAAGACGGGATGTGGGGTGGGAGTGTGTTTCTTAAGCCGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR CCA 90 bp TATCGCAGAGGCTTTCCAAGGTCGATGCCAGGAATCTGCAGGAGCCTTGGCTGCCAGGTTACGGGCACTTaGCCTCTGTTTGTGATCACC +
Preference number: 4 (lower is better)
Translates to: YRRGFPRSMPGICRSLGCQVTGT*PLFVIT
Trigger: GGTGATCACAAACAGAGGCCAAGTGCCCGTAACCTG...GCAGCCAAGGCTCCTGCAGATTCCTGGCATCGACCTTGGAAAGCCTCTGCGATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR CCA 90 bp GACATAATCCTGAAAACCCAGTCAGGGGCTGGGTGCACTGTCAGTGAGGAGTTTACTTCGGCCTGCTTTTaGCGTCGGTGCCTGGTCCAC +
Preference number: 4 (lower is better)
Translates to: DIILKTQSGAGCTVSEEFTSACF*RRCLVH
Trigger: GTGGACCAGGCACCGACGCCAAAAGCAGGCCGAAGT...AAACTCCTCACTGACAGTGCACCCAGCCCCTGACTGGGTTTTCAGGATTATGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR CCA 90 bp GACATAATCCTGAAAACCCAGTCAGGGGCTGGGTGCACTGTCAGTGAGGAGTTTCTCCCTAGGTTCAGCTaGATAGGACGCGGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: DIILKTQSGAGCTVSEEFLPRFS*IGRGQW
Trigger: CCACTGCCCGCGTCCTATCCAGCTGAACCTAGGGAG...AAACTCCTCACTGACAGTGCACCCAGCCCCTGACTGGGTTTTCAGGATTATGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR CCA 90 bp GACATAATCCTGAAAACCCAGTCAGGGGCTGGGTGCACTGTCAGTGAGGAGTTTCCTGGCCCCTTGTGGTaGCCTTCAATTCCTCGGCGT +
Preference number: 4 (lower is better)
Translates to: DIILKTQSGAGCTVSEEFPGPLW*PSIPRR
Trigger: ACGCCGAGGAATTGAAGGCCACCACAAGGGGCCAGG...AAACTCCTCACTGACAGTGCACCCAGCCCCTGACTGGGTTTTCAGGATTATGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR CCA 90 bp AGTAGTTGTTTCAACAGATCAGCTTCATCCTTTTTCTTCAGAAGCCCCAAACCGCCCGGGAGCCCGGCCTaGCCCCTTGTGGTGGCCTTC +
Preference number: 4 (lower is better)
Translates to: SSCFNRSASSFFFRSPKPPGSPA*PLVVAF
Trigger: GAAGGCCACCACAAGGGGCCAGGCCGGGCTCCCGGG...CGGTTTGGGGCTTCTGAAGAAAAAGGATGAAGCTGATCTGTTGAAACAACTACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR CCA 90 bp AGTGTCCCAAACTCCTTCACAAGAGCATGGACTGCAGGCCATGGAGACACAGAGTCCCCCTTCTTAGTGTaGTGGGTCCCAGAGTGGACC +
Preference number: 4 (lower is better)
Translates to: SVPNSFTRAWTAGHGDTESPFLV*WVPEWT
Trigger: GGTCCACTCTGGGACCCACCACACTAAGAAGGGGGA...CTCTGTGTCTCCATGGCCTGCAGTCCATGCTCTTGTGAAGGAGTTTGGGACACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR TCA 90 bp AGTAGTTGTTTCAACAGATCAGCTTCATCCTTTTTCTTCAGAAGCCCCAAACCGGGGCCTGAAGGAGGCTaGCCGCTGGCCCCAGCCTTC +
Preference number: 4 (lower is better)
Translates to: SSCFNRSASSFFFRSPKPGPEGG*PLAPAF
Trigger: GAAGGCTGGGGCCAGCGGTCAGCCTCCTTCAGGCCC...CGGTTTGGGGCTTCTGAAGAAAAAGGATGAAGCTGATCTGTTGAAACAACTACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR GCA 90 bp GACATAATCCTGAAAACCCAGTCAGGGGCTGGGTGCACTGTCAGTGAGGAGTTTTCCAGGCTGACGTTCTaGCACTTGGCAGGACCTGAC +
Preference number: 4 (lower is better)
Translates to: DIILKTQSGAGCTVSEEFSRLTF*HLAGPD
Trigger: GTCAGGTCCTGCCAAGTGGCAGAACGTCAGCCTGGA...AAACTCCTCACTGACAGTGCACCCAGCCCCTGACTGGGTTTTCAGGATTATGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR GCA 90 bp AGTGTCCCAAACTCCTTCACAAGAGCATGGACTGCAGGCCATGGAGACACAGAGGAATGGGAATTTCCGTaGAACTCAGGCTCTCGGGGG +
Preference number: 4 (lower is better)
Translates to: SVPNSFTRAWTAGHGDTEEWEFP*NSGSRG
Trigger: CCCCCGAGAGCCTGAGTTGCACGGAAATTCCCATTC...CTCTGTGTCTCCATGGCCTGCAGTCCATGCTCTTGTGAAGGAGTTTGGGACACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR GCA 90 bp AGGCGCCTCAGCCCTTATTTGGTACTACCAGGTGACTTCAATGATTCACCAGCTAGGCCACTGTCCCCTTaGCACACAGCGGTCTCTCTG +
Preference number: 4 (lower is better)
Translates to: RRLSPYLVLPGDFNDSPARPLSP*HTAVSL
Trigger: CAGAGAGACCGCTGTGTGGCAAGGGGACAGTGGCCT...AGCTGGTGAATCATTGAAGTCACCTGGTAGTACCAAATAAGGGCTGAGGCGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR GCA 90 bp AGGCGCCTCAGCCCTTATTTGGTACTACCAGGTGACTTCAATGATTCACCAGCTCTTCCTGTGAGGGCCTaGAGCTCCAGGTCGGTGGAA +
Preference number: 4 (lower is better)
Translates to: RRLSPYLVLPGDFNDSPALPVRA*SSRSVE
Trigger: TTCCACCGACCTGGAGCTGCAGGCCCTCACAGGAAG...AGCTGGTGAATCATTGAAGTCACCTGGTAGTACCAAATAAGGGCTGAGGCGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR GCA 90 bp AGCAGTTATGCACATGGACATAATCCTGAAAACCCAGTCAGGGGCTGGGTGCACTGCTTTTGGCGTCGGTaGCTGGTCCACGGACAAGGA +
Preference number: 4 (lower is better)
Translates to: SSYAHGHNPENPVRGWVHCFWRR*LVHGQG
Trigger: TCCTTGTCCGTGGACCAGGCACCGACGCCAAAAGCA...GTGCACCCAGCCCCTGACTGGGTTTTCAGGATTATGTCCATGTGCATAACTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR GCA 90 bp TATCGCAGAGGCTTTCCAAGGTCGATGCCAGGAATCTGCAGGAGCCTTGGCTGCTCTCTTCCCTGGAGATaGTGTCCTTGGACACAGAGA +
Preference number: 4 (lower is better)
Translates to: YRRGFPRSMPGICRSLGCSLPWR*CPWTQR
Trigger: TCTCTGTGTCCAAGGACAGCATCTCCAGGGAAGAGA...GCAGCCAAGGCTCCTGCAGATTCCTGGCATCGACCTTGGAAAGCCTCTGCGATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR GCA 90 bp AGTGTCCCAAACTCCTTCACAAGAGCATGGACTGCAGGCCATGGAGACACAGAGCAGTCAGGGGCTGGGTaGACTGTCAGTGAGGAGTTT +
Preference number: 4 (lower is better)
Translates to: SVPNSFTRAWTAGHGDTEQSGAG*TVSEEF
Trigger: AAACTCCTCACTGACAGTGCACCCAGCCCCTGACTG...CTCTGTGTCTCCATGGCCTGCAGTCCATGCTCTTGTGAAGGAGTTTGGGACACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR CCA 90 bp TATCGCAGAGGCTTTCCAAGGTCGATGCCAGGAATCTGCAGGAGCCTTGGCTGCCCTAATTTCCTTGGCTaGTTCCAGCTTTCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: YRRGFPRSMPGICRSLGCPNFLG*FQLSRL
Trigger: CAGCCTGGAAAGCTGGAACCAGCCAAGGAAATTAGG...GCAGCCAAGGCTCCTGCAGATTCCTGGCATCGACCTTGGAAAGCCTCTGCGATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR CCA 90 bp CTGCCTTCCCACACTGCTGATGAACCAAGGACTGTTTCGACAGGCAGGTTGCTAACACAGCGGTCTCTCTaGTTGGGGAGGCCACTGTTT +
Preference number: 4 (lower is better)
Translates to: LPSHTADEPRTVSTGRLLTQRSL*LGRPLF
Trigger: AAACAGTGGCCTCCCCAACCAGAGAGACCGCTGTGT...TAGCAACCTGCCTGTCGAAACAGTCCTTGGTTCATCAGCAGTGTGGGAAGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR CCA 90 bp TTCGGCTTAAGAAACACACTCCCACCCCACATCCCGTCTTTTAAGCTTCATCTCTGTTGCAAGGGCCCGTaGGCTCCCCCTTCACCACCT +
Preference number: 4 (lower is better)
Translates to: FGLRNTLPPHIPSFKLHLCCKGP*APPSPP
Trigger: AGGTGGTGAAGGGGGAGCCCACGGGCCCTTGCAACA...GAGATGAAGCTTAAAAGACGGGATGTGGGGTGGGAGTGTGTTTCTTAAGCCGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR CCA 90 bp AGCAGTTATGCACATGGACATAATCCTGAAAACCCAGTCAGGGGCTGGGTGCACCCACATCCTCGGCTGTaGCTCAACCCTCATTTCCGG +
Preference number: 4 (lower is better)
Translates to: SSYAHGHNPENPVRGWVHPHPRL*LNPHFR
Trigger: CCGGAAATGAGGGTTGAGCCACAGCCGAGGATGTGG...GTGCACCCAGCCCCTGACTGGGTTTTCAGGATTATGTCCATGTGCATAACTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR CCA 90 bp CTGCCTTCCCACACTGCTGATGAACCAAGGACTGTTTCGACAGGCAGGTTGCTATCTCGTCACAGGAAATaGGCTACCTGCCAGCTCGTC +
Preference number: 4 (lower is better)
Translates to: LPSHTADEPRTVSTGRLLSRHRK*ATCQLV
Trigger: GACGAGCTGGCAGGTAGCCCATTTCCTGTGACGAGA...TAGCAACCTGCCTGTCGAAACAGTCCTTGGTTCATCAGCAGTGTGGGAAGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR CCA 90 bp AGCAGTTATGCACATGGACATAATCCTGAAAACCCAGTCAGGGGCTGGGTGCACACCCCTCTAGCTCACTaGCACCCTGTTCTTGCCCAG +
Preference number: 4 (lower is better)
Translates to: SSYAHGHNPENPVRGWVHTPLAH*HPVLAQ
Trigger: CTGGGCAAGAACAGGGTGCCAGTGAGCTAGAGGGGT...GTGCACCCAGCCCCTGACTGGGTTTTCAGGATTATGTCCATGTGCATAACTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR CCA 90 bp TATCATCTCCCCCTTCTTAGTGTGGTGGGTCCCAGAGTGGACCAACCCACACTCGCTCCTTCTCTTCCCTaGAGATGCTGTCCTTGGACA +
Preference number: 4 (lower is better)
Translates to: YHLPLLSVVGPRVDQPTLAPSLP*RCCPWT
Trigger: TGTCCAAGGACAGCATCTCCAGGGAAGAGAAGGAGC...GAGTGTGGGTTGGTCCACTCTGGGACCCACCACACTAAGAAGGGGGAGATGATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR TCA 90 bp TGCTGTATTCGTACACACAAGTATCGCAGAGGCTTTCCAAGGTCGATGCCAGGAGGGAGTCGGCATTCCTaGAGCTCAGGACTCTCATCC +
Preference number: 4 (lower is better)
Translates to: CCIRTHKYRRGFPRSMPGGSRHS*SSGLSS
Trigger: GGATGAGAGTCCTGAGCTTCAGGAATGCCGACTCCC...TCCTGGCATCGACCTTGGAAAGCCTCTGCGATACTTGTGTGTACGAATACAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR TCA 90 bp AGTGTCCCAAACTCCTTCACAAGAGCATGGACTGCAGGCCATGGAGACACAGAGCAGAACACGCAAACGTaGTCTCTGGGGGTCACAAGA +
Preference number: 4 (lower is better)
Translates to: SVPNSFTRAWTAGHGDTEQNTQT*SLGVTR
Trigger: TCTTGTGACCCCCAGAGATCACGTTTGCGTGTTCTG...CTCTGTGTCTCCATGGCCTGCAGTCCATGCTCTTGTGAAGGAGTTTGGGACACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR GCA 90 bp CTGCCTTCCCACACTGCTGATGAACCAAGGACTGTTTCGACAGGCAGGTTGCTAGGAGTCCAAATTTGGTaGGCAAGTGGGAGGATACGG +
Preference number: 4 (lower is better)
Translates to: LPSHTADEPRTVSTGRLLGVQIW*ASGRIR
Trigger: CCGTATCCTCCCACTTGCGCACCAAATTTGGACTCC...TAGCAACCTGCCTGTCGAAACAGTCCTTGGTTCATCAGCAGTGTGGGAAGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR GCA 90 bp TGCTGTATTCGTACACACAAGTATCGCAGAGGCTTTCCAAGGTCGATGCCAGGAACTTGTCTTCCAGTGTaGCCGTGCTGGCTGCCTCTC +
Preference number: 4 (lower is better)
Translates to: CCIRTHKYRRGFPRSMPGTCLPV*PCWLPL
Trigger: GAGAGGCAGCCAGCACGGGCACACTGGAAGACAAGT...TCCTGGCATCGACCTTGGAAAGCCTCTGCGATACTTGTGTGTACGAATACAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR GCA 90 bp TATCATCTCCCCCTTCTTAGTGTGGTGGGTCCCAGAGTGGACCAACCCACACTCTGCTGCTGCTGCTACTaGTGCTTTCTTCCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: YHLPLLSVVGPRVDQPTLCCCCY*CFLPLP
Trigger: AGGAAGAGGAAGAAAGCAGCAGTAGCAGCAGCAGCA...GAGTGTGGGTTGGTCCACTCTGGGACCCACCACACTAAGAAGGGGGAGATGATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR GCA 90 bp AGTGTCCCAAACTCCTTCACAAGAGCATGGACTGCAGGCCATGGAGACACAGAGGCTCTTCTCCTTTTGTaGTGCCGGATGCTCCTTCTC +
Preference number: 4 (lower is better)
Translates to: SVPNSFTRAWTAGHGDTEALLLL*CRMLLL
Trigger: GAGAAGGAGCATCCGGCAGCACAAAAGGAGAAGAGC...CTCTGTGTCTCCATGGCCTGCAGTCCATGCTCTTGTGAAGGAGTTTGGGACACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR GCA 90 bp TATCGCAGAGGCTTTCCAAGGTCGATGCCAGGAATCTGCAGGAGCCTTGGCTGCCTTTCCAACAAAACCTaGAGGCTGGAGGCCATTCTT +
Preference number: 4 (lower is better)
Translates to: YRRGFPRSMPGICRSLGCLSNKT*RLEAIL
Trigger: AAGAATGGCCTCCAGCCTGCAGGTTTTGTTGGAAAG...GCAGCCAAGGCTCCTGCAGATTCCTGGCATCGACCTTGGAAAGCCTCTGCGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR CCA 90 bp TATCGCAGAGGCTTTCCAAGGTCGATGCCAGGAATCTGCAGGAGCCTTGGCTGCAATTTGGTGCGCAAGTaGGAGGATACGGTGGCATTT +
Preference number: 4 (lower is better)
Translates to: YRRGFPRSMPGICRSLGCNLVRK*EDTVAF
Trigger: AAATGCCACCGTATCCTCCCACTTGCGCACCAAATT...GCAGCCAAGGCTCCTGCAGATTCCTGGCATCGACCTTGGAAAGCCTCTGCGATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR CCA 90 bp AGTGTCCCAAACTCCTTCACAAGAGCATGGACTGCAGGCCATGGAGACACAGAGTGGAGATGCTGTCCTTaGACACAGAGAGTGAGTGGC +
Preference number: 4 (lower is better)
Translates to: SVPNSFTRAWTAGHGDTEWRCCP*TQRVSG
Trigger: GCCACTCACTCTCTGTGTCCAAGGACAGCATCTCCA...CTCTGTGTCTCCATGGCCTGCAGTCCATGCTCTTGTGAAGGAGTTTGGGACACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR CCA 90 bp AGTGTCCCAAACTCCTTCACAAGAGCATGGACTGCAGGCCATGGAGACACAGAGTCCTTCACAAGAGCATaGACTGCAGGCCATGGAGAC +
Preference number: 4 (lower is better)
Translates to: SVPNSFTRAWTAGHGDTESFTRA*TAGHGD
Trigger: GTCTCCATGGCCTGCAGTCCATGCTCTTGTGAAGGA...CTCTGTGTCTCCATGGCCTGCAGTCCATGCTCTTGTGAAGGAGTTTGGGACACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375377.2
3UTR CAA 72 bp GACCCCACAAAGACCTCCAGGCGCCTCAGCCCTTATTaGGTACTACCAGGTGACTTCAATGATTCACCAGCT +
Preference number: 4 (lower is better)
Translates to: DPTKTSRRLSPY*VLPGDFNDSPA
Trigger: AGCTGGTGAATCATTGAAGTCACCTGGTAGTACCAAATAAGGGCTGAGGCGCCTGGAGGTCTTTGTGGGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR TCA 90 bp AGTGTCCCAAACTCCTTCACAAGAGCATGGACTGCAGGCCATGGAGACACAGAGGGCTCGAATTTCAGCTaGCCTAGGTGGAGAGTACTT +
Preference number: 4 (lower is better)
Translates to: SVPNSFTRAWTAGHGDTEGSNFS*PRWRVL
Trigger: AAGTACTCTCCACCTAGGTCAGCTGAAATTCGAGCC...CTCTGTGTCTCCATGGCCTGCAGTCCATGCTCTTGTGAAGGAGTTTGGGACACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR GCA 90 bp GACATAATCCTGAAAACCCAGTCAGGGGCTGGGTGCACTGTCAGTGAGGAGTTTATCACCGGTAGGGAATaGTGTGTGCGTCTGAGCTTC +
Preference number: 4 (lower is better)
Translates to: DIILKTQSGAGCTVSEEFITGRE*CVRLSF
Trigger: GAAGCTCAGACGCACACAGCATTCCCTACCGGTGAT...AAACTCCTCACTGACAGTGCACCCAGCCCCTGACTGGGTTTTCAGGATTATGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR GCA 90 bp TGCTGTATTCGTACACACAAGTATCGCAGAGGCTTTCCAAGGTCGATGCCAGGACCACATCCTCCTGTCTaGAGTGAGCACGGTTCTCCT +
Preference number: 4 (lower is better)
Translates to: CCIRTHKYRRGFPRSMPGPHPPV*SEHGSP
Trigger: AGGAGAACCGTGCTCACTGCAGACAGGAGGATGTGG...TCCTGGCATCGACCTTGGAAAGCCTCTGCGATACTTGTGTGTACGAATACAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR GCA 90 bp AGCAGTTATGCACATGGACATAATCCTGAAAACCCAGTCAGGGGCTGGGTGCACCAGGTGTCTCTTCTCTaGACTCGTGCTTCCATCTGC +
Preference number: 4 (lower is better)
Translates to: SSYAHGHNPENPVRGWVHQVSLL*TRASIC
Trigger: GCAGATGGAAGCACGAGTGCAGAGAAGAGACACCTG...GTGCACCCAGCCCCTGACTGGGTTTTCAGGATTATGTCCATGTGCATAACTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR GCA 90 bp AGCAGTTATGCACATGGACATAATCCTGAAAACCCAGTCAGGGGCTGGGTGCACCACAAGAGCATGGACTaGAGGCCATGGAGACACAGA +
Preference number: 4 (lower is better)
Translates to: SSYAHGHNPENPVRGWVHHKSMD*RPWRHR
Trigger: TCTGTGTCTCCATGGCCTGCAGTCCATGCTCTTGTG...GTGCACCCAGCCCCTGACTGGGTTTTCAGGATTATGTCCATGTGCATAACTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR GCA 90 bp AGGCGCCTCAGCCCTTATTTGGTACTACCAGGTGACTTCAATGATTCACCAGCTTCGATGCCAGGAATCTaGAGGAGCCTTGGCTGCCTT +
Preference number: 4 (lower is better)
Translates to: RRLSPYLVLPGDFNDSPASMPGI*RSLGCL
Trigger: AAGGCAGCCAAGGCTCCTGCAGATTCCTGGCATCGA...AGCTGGTGAATCATTGAAGTCACCTGGTAGTACCAAATAAGGGCTGAGGCGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR CCA 90 bp AGGCGCCTCAGCCCTTATTTGGTACTACCAGGTGACTTCAATGATTCACCAGCTGCAAAGCTCAACCACTaGAACCATGGTGGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: RRLSPYLVLPGDFNDSPAAKLNH*NHGGGR
Trigger: CCTGCCACCACCATGGTTCCAGTGGTTGAGCTTTGC...AGCTGGTGAATCATTGAAGTCACCTGGTAGTACCAAATAAGGGCTGAGGCGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR CCA 90 bp AGTAGTTGTTTCAACAGATCAGCTTCATCCTTTTTCTTCAGAAGCCCCAAACCGCCAGTCCTCGCTGCCTaGCGCCCCTTGGGGTTATCC +
Preference number: 4 (lower is better)
Translates to: SSCFNRSASSFFFRSPKPPVLAA*RPLGLS
Trigger: GGATAACCCCAAGGGGCGCCAGGCAGCGAGGACTGG...CGGTTTGGGGCTTCTGAAGAAAAAGGATGAAGCTGATCTGTTGAAACAACTACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR CCA 90 bp AGGCGCCTCAGCCCTTATTTGGTACTACCAGGTGACTTCAATGATTCACCAGCTCTTGGGCCATTCCTCTaGCCTCCAGGTTTTCGTGCT +
Preference number: 4 (lower is better)
Translates to: RRLSPYLVLPGDFNDSPALGPFL*PPGFRA
Trigger: AGCACGAAAACCTGGAGGCCAGAGGAATGGCCCAAG...AGCTGGTGAATCATTGAAGTCACCTGGTAGTACCAAATAAGGGCTGAGGCGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR CCA 90 bp AGTAGTTGTTTCAACAGATCAGCTTCATCCTTTTTCTTCAGAAGCCCCAAACCGGGCAGGCTGTGGGCTTaGGCCATTCCTCTGGCCTCC +
Preference number: 4 (lower is better)
Translates to: SSCFNRSASSFFFRSPKPGRLWA*AIPLAS
Trigger: GGAGGCCAGAGGAATGGCCCAAGCCCACAGCCTGCC...CGGTTTGGGGCTTCTGAAGAAAAAGGATGAAGCTGATCTGTTGAAACAACTACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR CCA 90 bp TTCGGCTTAAGAAACACACTCCCACCCCACATCCCGTCTTTTAAGCTTCATCTCAGCGGTCTCTCTGGTTaGGGAGGCCACTGTTTTCCC +
Preference number: 4 (lower is better)
Translates to: FGLRNTLPPHIPSFKLHLSGLSG*GGHCFP
Trigger: GGGAAAACAGTGGCCTCCCCAACCAGAGAGACCGCT...GAGATGAAGCTTAAAAGACGGGATGTGGGGTGGGAGTGTGTTTCTTAAGCCGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR CCA 90 bp AGGCGCCTCAGCCCTTATTTGGTACTACCAGGTGACTTCAATGATTCACCAGCTAGCAGCTGCGAACTTTaGGGCTCCTCGGAGAAACTG +
Preference number: 4 (lower is better)
Translates to: RRLSPYLVLPGDFNDSPASSCEL*GSSEKL
Trigger: CAGTTTCTCCGAGGAGCCCCAAAGTTCGCAGCTGCT...AGCTGGTGAATCATTGAAGTCACCTGGTAGTACCAAATAAGGGCTGAGGCGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR CCA 90 bp AGTAGTTGTTTCAACAGATCAGCTTCATCCTTTTTCTTCAGAAGCCCCAAACCGCGCTTAGGCCCAGGGTaGGCTCCAAGCCCGTGGACA +
Preference number: 4 (lower is better)
Translates to: SSCFNRSASSFFFRSPKPRLGPG*APSPWT
Trigger: TGTCCACGGGCTTGGAGCCCACCCTGGGCCTAAGCG...CGGTTTGGGGCTTCTGAAGAAAAAGGATGAAGCTGATCTGTTGAAACAACTACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR CCA 90 bp CTGCCTTCCCACACTGCTGATGAACCAAGGACTGTTTCGACAGGCAGGTTGCTAATTTTCGGACTTTCCTaGGGCTCCCTAGGTTCAGCT +
Preference number: 4 (lower is better)
Translates to: LPSHTADEPRTVSTGRLLIFGLS*GSLGSA
Trigger: AGCTGAACCTAGGGAGCCCCAGGAAAGTCCGAAAAT...TAGCAACCTGCCTGTCGAAACAGTCCTTGGTTCATCAGCAGTGTGGGAAGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR CCA 90 bp TATCGCAGAGGCTTTCCAAGGTCGATGCCAGGAATCTGCAGGAGCCTTGGCTGCAGAGCCTGCCACACTTaGGGTTCTTTCTACAAAATG +
Preference number: 4 (lower is better)
Translates to: YRRGFPRSMPGICRSLGCRACHT*GSFYKM
Trigger: CATTTTGTAGAAAGAACCCCAAGTGTGGCAGGCTCT...GCAGCCAAGGCTCCTGCAGATTCCTGGCATCGACCTTGGAAAGCCTCTGCGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR CCA 90 bp TGCTGTATTCGTACACACAAGTATCGCAGAGGCTTTCCAAGGTCGATGCCAGGACCCTTCTTAGTGTGGTaGGTCCCAGAGTGGACCAAC +
Preference number: 4 (lower is better)
Translates to: CCIRTHKYRRGFPRSMPGPFLVW*VPEWTN
Trigger: GTTGGTCCACTCTGGGACCCACCACACTAAGAAGGG...TCCTGGCATCGACCTTGGAAAGCCTCTGCGATACTTGTGTGTACGAATACAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR CCA 90 bp TGCTGTATTCGTACACACAAGTATCGCAGAGGCTTTCCAAGGTCGATGCCAGGAAATCTGCAGGAGCCTTaGCTGCCTTCCCACACTGCT +
Preference number: 4 (lower is better)
Translates to: CCIRTHKYRRGFPRSMPGNLQEP*LPSHTA
Trigger: AGCAGTGTGGGAAGGCAGCCAAGGCTCCTGCAGATT...TCCTGGCATCGACCTTGGAAAGCCTCTGCGATACTTGTGTGTACGAATACAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR TCA 90 bp AGTGTCCCAAACTCCTTCACAAGAGCATGGACTGCAGGCCATGGAGACACAGAGCTTCTACACTGTACATaGTGCCTGGGCTTCAGCAAA +
Preference number: 4 (lower is better)
Translates to: SVPNSFTRAWTAGHGDTELLHCT*CLGFSK
Trigger: TTTGCTGAAGCCCAGGCATCATGTACAGTGTAGAAG...CTCTGTGTCTCCATGGCCTGCAGTCCATGCTCTTGTGAAGGAGTTTGGGACACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR TCA 90 bp AGTGTCCCAAACTCCTTCACAAGAGCATGGACTGCAGGCCATGGAGACACAGAGAAGAACTCTAGGCAGTaGGCGAGACTTCCCTTTGTT +
Preference number: 4 (lower is better)
Translates to: SVPNSFTRAWTAGHGDTEKNSRQ*ARLPFV
Trigger: AACAAAGGGAAGTCTCGCTCACTGCCTAGAGTTCTT...CTCTGTGTCTCCATGGCCTGCAGTCCATGCTCTTGTGAAGGAGTTTGGGACACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR TCA 90 bp CTGCCTTCCCACACTGCTGATGAACCAAGGACTGTTTCGACAGGCAGGTTGCTATTTTTGAGCTTGGTTTaGGTTTCGCAGGTGCTCTCG +
Preference number: 4 (lower is better)
Translates to: LPSHTADEPRTVSTGRLLFLSLV*VSQVLS
Trigger: CGAGAGCACCTGCGAAACTCAAACCAAGCTCAAAAA...TAGCAACCTGCCTGTCGAAACAGTCCTTGGTTCATCAGCAGTGTGGGAAGGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR TCA 90 bp TGCTGTATTCGTACACACAAGTATCGCAGAGGCTTTCCAAGGTCGATGCCAGGACTTGGCCTCTGTTTGTaGTCACCGGTAGGGAATGCT +
Preference number: 4 (lower is better)
Translates to: CCIRTHKYRRGFPRSMPGLGLCL*SPVGNA
Trigger: AGCATTCCCTACCGGTGATCACAAACAGAGGCCAAG...TCCTGGCATCGACCTTGGAAAGCCTCTGCGATACTTGTGTGTACGAATACAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR TCA 90 bp TATCATCTCCCCCTTCTTAGTGTGGTGGGTCCCAGAGTGGACCAACCCACACTCGCTTTAAAGCAAAAGTaGACCCTCTTTGGGTTCCTC +
Preference number: 4 (lower is better)
Translates to: YHLPLLSVVGPRVDQPTLALKQK*TLFGFL
Trigger: GAGGAACCCAAAGAGGGTTCACTTTTGCTTTAAAGC...GAGTGTGGGTTGGTCCACTCTGGGACCCACCACACTAAGAAGGGGGAGATGATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR TCA 90 bp AGTGTCCCAAACTCCTTCACAAGAGCATGGACTGCAGGCCATGGAGACACAGAGAGCTACAACAGTGTCTaGACTCTTCCCCACTCAACT +
Preference number: 4 (lower is better)
Translates to: SVPNSFTRAWTAGHGDTESYNSV*TLPHST
Trigger: AGTTGAGTGGGGAAGAGTTCAGACACTGTTGTAGCT...CTCTGTGTCTCCATGGCCTGCAGTCCATGCTCTTGTGAAGGAGTTTGGGACACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR TCA 90 bp TATCATCTCCCCCTTCTTAGTGTGGTGGGTCCCAGAGTGGACCAACCCACACTCCTTAGAATTTCCACGTaGATGAAACCCGCAACCTAC +
Preference number: 4 (lower is better)
Translates to: YHLPLLSVVGPRVDQPTLLRIST*MKPATY
Trigger: GTAGGTTGCGGGTTTCATTCACGTGGAAATTCTAAG...GAGTGTGGGTTGGTCCACTCTGGGACCCACCACACTAAGAAGGGGGAGATGATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR GCA 90 bp GACATAATCCTGAAAACCCAGTCAGGGGCTGGGTGCACTGTCAGTGAGGAGTTTTTTGAGTTTCGCAGGTaGTCTCGCCCTGTGAGTAAG +
Preference number: 4 (lower is better)
Translates to: DIILKTQSGAGCTVSEEFFEFRR*SRPVSK
Trigger: CTTACTCACAGGGCGAGAGCACCTGCGAAACTCAAA...AAACTCCTCACTGACAGTGCACCCAGCCCCTGACTGGGTTTTCAGGATTATGTC
51% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR GCA 90 bp TTCGGCTTAAGAAACACACTCCCACCCCACATCCCGTCTTTTAAGCTTCATCTCTTTTGGACTCAATGCTaGACGACTCGGCCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: FGLRNTLPPHIPSFKLHLFWTQC*TTRPSQ
Trigger: CTGGGAGGGCCGAGTCGTGCAGCATTGAGTCCAAAA...GAGATGAAGCTTAAAAGACGGGATGTGGGGTGGGAGTGTGTTTCTTAAGCCGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR GCA 90 bp AGTAGTTGTTTCAACAGATCAGCTTCATCCTTTTTCTTCAGAAGCCCCAAACCGCTGGCACCCTGTTCTTaGCCAGGGGTGAGCCCCACA +
Preference number: 4 (lower is better)
Translates to: SSCFNRSASSFFFRSPKPLAPCS*PGVSPT
Trigger: TGTGGGGCTCACCCCTGGGCAAGAACAGGGTGCCAG...CGGTTTGGGGCTTCTGAAGAAAAAGGATGAAGCTGATCTGTTGAAACAACTACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR GCA 90 bp AGTGTCCCAAACTCCTTCACAAGAGCATGGACTGCAGGCCATGGAGACACAGAGTCTCTTTTCAGAGCCTaGCACACTTGGGGTTCTTTC +
Preference number: 4 (lower is better)
Translates to: SVPNSFTRAWTAGHGDTESLFRA*HTWGSF
Trigger: GAAAGAACCCCAAGTGTGGCAGGCTCTGAAAAGAGA...CTCTGTGTCTCCATGGCCTGCAGTCCATGCTCTTGTGAAGGAGTTTGGGACACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR GCA 90 bp TATCGCAGAGGCTTTCCAAGGTCGATGCCAGGAATCTGCAGGAGCCTTGGCTGCAGCCCCAAACCGAGATaGTGTCAGAATAAGTCATTT +
Preference number: 4 (lower is better)
Translates to: YRRGFPRSMPGICRSLGCSPKPR*CQNKSF
Trigger: AAATGACTTATTCTGACAGCATCTCGGTTTGGGGCT...GCAGCCAAGGCTCCTGCAGATTCCTGGCATCGACCTTGGAAAGCCTCTGCGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR GCA 90 bp AGTGTCCCAAACTCCTTCACAAGAGCATGGACTGCAGGCCATGGAGACACAGAGCTGCACTGGTCACTTTaGAAGAGATGCTATCCTGAC +
Preference number: 4 (lower is better)
Translates to: SVPNSFTRAWTAGHGDTELHWSL*KRCYPD
Trigger: GTCAGGATAGCATCTCTTGCAAAGTGACCAGTGCAG...CTCTGTGTCTCCATGGCCTGCAGTCCATGCTCTTGTGAAGGAGTTTGGGACACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR GCA 90 bp TATCATCTCCCCCTTCTTAGTGTGGTGGGTCCCAGAGTGGACCAACCCACACTCAAGCTTCATCTCCCCTaGATAAATGGGTCTGGTAGA +
Preference number: 4 (lower is better)
Translates to: YHLPLLSVVGPRVDQPTLKLHLP*INGSGR
Trigger: TCTACCAGACCCATTTATGCAGGGGAGATGAAGCTT...GAGTGTGGGTTGGTCCACTCTGGGACCCACCACACTAAGAAGGGGGAGATGATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR GCA 90 bp AGCAGTTATGCACATGGACATAATCCTGAAAACCCAGTCAGGGGCTGGGTGCACGACCTCCCTGTCCTCTaGTGTATTCGTACACACAAG +
Preference number: 4 (lower is better)
Translates to: SSYAHGHNPENPVRGWVHDLPVL*CIRTHK
Trigger: CTTGTGTGTACGAATACAGCAGAGGACAGGGAGGTC...GTGCACCCAGCCCCTGACTGGGTTTTCAGGATTATGTCCATGTGCATAACTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR CCA 90 bp TATCGCAGAGGCTTTCCAAGGTCGATGCCAGGAATCTGCAGGAGCCTTGGCTGCTTCTTCTTCCCAAACTaGCTTCTTCATCACATGCTC +
Preference number: 4 (lower is better)
Translates to: YRRGFPRSMPGICRSLGCFFFPN*LLHHML
Trigger: GAGCATGTGATGAAGAAGCCAGTTTGGGAAGAAGAA...GCAGCCAAGGCTCCTGCAGATTCCTGGCATCGACCTTGGAAAGCCTCTGCGATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR CCA 90 bp CTGCCTTCCCACACTGCTGATGAACCAAGGACTGTTTCGACAGGCAGGTTGCTAAGGGTCATAGGAATCTaGGCACCAGAAGTCTTGATC +
Preference number: 4 (lower is better)
Translates to: LPSHTADEPRTVSTGRLLRVIGI*APEVLI
Trigger: GATCAAGACTTCTGGTGCCCAGATTCCTATGACCCT...TAGCAACCTGCCTGTCGAAACAGTCCTTGGTTCATCAGCAGTGTGGGAAGGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR CCA 90 bp GACATAATCCTGAAAACCCAGTCAGGGGCTGGGTGCACTGTCAGTGAGGAGTTTCTTCCAGCTTCTACATaGGGAAGTGGGGCTGATAGA +
Preference number: 4 (lower is better)
Translates to: DIILKTQSGAGCTVSEEFLPAST*GSGADR
Trigger: TCTATCAGCCCCACTTCCCCATGTAGAAGCTGGAAG...AAACTCCTCACTGACAGTGCACCCAGCCCCTGACTGGGTTTTCAGGATTATGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR CCA 90 bp CTGCCTTCCCACACTGCTGATGAACCAAGGACTGTTTCGACAGGCAGGTTGCTAGCCTCAGCCCTTATTTaGTACTACCAGGTGACTTCA +
Preference number: 4 (lower is better)
Translates to: LPSHTADEPRTVSTGRLLASALI*YYQVTS
Trigger: TGAAGTCACCTGGTAGTACCAAATAAGGGCTGAGGC...TAGCAACCTGCCTGTCGAAACAGTCCTTGGTTCATCAGCAGTGTGGGAAGGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR CCA 90 bp AGTGTCCCAAACTCCTTCACAAGAGCATGGACTGCAGGCCATGGAGACACAGAGCGCAAACGTGATCTCTaGGGGTCACAAGATGAAATG +
Preference number: 4 (lower is better)
Translates to: SVPNSFTRAWTAGHGDTERKRDL*GSQDEM
Trigger: CATTTCATCTTGTGACCCCCAGAGATCACGTTTGCG...CTCTGTGTCTCCATGGCCTGCAGTCCATGCTCTTGTGAAGGAGTTTGGGACACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR TCA 90 bp CTGCCTTCCCACACTGCTGATGAACCAAGGACTGTTTCGACAGGCAGGTTGCTATCAGACCCATTCTTTTaGTCAGCACTGGGCTTTAAG +
Preference number: 4 (lower is better)
Translates to: LPSHTADEPRTVSTGRLLSDPFF*SALGFK
Trigger: CTTAAAGCCCAGTGCTGATCAAAAGAATGGGTCTGA...TAGCAACCTGCCTGTCGAAACAGTCCTTGGTTCATCAGCAGTGTGGGAAGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR TCA 90 bp CTGCCTTCCCACACTGCTGATGAACCAAGGACTGTTTCGACAGGCAGGTTGCTATGGGTGCACTGTCAGTaGGGAGTTTTTCTGTACTTT +
Preference number: 4 (lower is better)
Translates to: LPSHTADEPRTVSTGRLLWVHCQ*GVFLYF
Trigger: AAAGTACAGAAAAACTCCTCACTGACAGTGCACCCA...TAGCAACCTGCCTGTCGAAACAGTCCTTGGTTCATCAGCAGTGTGGGAAGGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR TCA 90 bp AGTGTCCCAAACTCCTTCACAAGAGCATGGACTGCAGGCCATGGAGACACAGAGGAATTTCCACGTGAATaGAACCCGCAACCTACAACT +
Preference number: 4 (lower is better)
Translates to: SVPNSFTRAWTAGHGDTEEFPRE*NPQPTT
Trigger: AGTTGTAGGTTGCGGGTTTCATTCACGTGGAAATTC...CTCTGTGTCTCCATGGCCTGCAGTCCATGCTCTTGTGAAGGAGTTTGGGACACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR GCA 90 bp AGGCGCCTCAGCCCTTATTTGGTACTACCAGGTGACTTCAATGATTCACCAGCTAGCAGACTCTGTTCTTaGAGAGCCGGGCTCTTATCA +
Preference number: 4 (lower is better)
Translates to: RRLSPYLVLPGDFNDSPASRLCS*RAGLLS
Trigger: TGATAAGAGCCCGGCTCTGCAAGAACAGAGTCTGCT...AGCTGGTGAATCATTGAAGTCACCTGGTAGTACCAAATAAGGGCTGAGGCGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR GCA 90 bp TGCTGTATTCGTACACACAAGTATCGCAGAGGCTTTCCAAGGTCGATGCCAGGATGCTGCTGCTACTGCTaGTTTCTTCCTCTTCCTGGA +
Preference number: 4 (lower is better)
Translates to: CCIRTHKYRRGFPRSMPGCCCYC*FLPLPG
Trigger: TCCAGGAAGAGGAAGAAAGCAGCAGTAGCAGCAGCA...TCCTGGCATCGACCTTGGAAAGCCTCTGCGATACTTGTGTGTACGAATACAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR GCA 90 bp TGCTGTATTCGTACACACAAGTATCGCAGAGGCTTTCCAAGGTCGATGCCAGGACTTCTCCTTTTGTGCTaGCGGATGCTCCTTCTCTTC +
Preference number: 4 (lower is better)
Translates to: CCIRTHKYRRGFPRSMPGLLLLC*RMLLLF
Trigger: GAAGAGAAGGAGCATCCGGCAGCACAAAAGGAGAAG...TCCTGGCATCGACCTTGGAAAGCCTCTGCGATACTTGTGTGTACGAATACAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR GCA 90 bp AGCAGTTATGCACATGGACATAATCCTGAAAACCCAGTCAGGGGCTGGGTGCACAAAAATCCCCCAGCCTaGAACAGCTTCGGCTTAAGA +
Preference number: 4 (lower is better)
Translates to: SSYAHGHNPENPVRGWVHKNPPA*NSFGLR
Trigger: TCTTAAGCCGAAGCTGTTGCAGGCTGGGGGATTTTT...GTGCACCCAGCCCCTGACTGGGTTTTCAGGATTATGTCCATGTGCATAACTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR CCA 90 bp TGCTGTATTCGTACACACAAGTATCGCAGAGGCTTTCCAAGGTCGATGCCAGGACGCCACACACATTTATaGGCACCGTGTCTTCCAAGT +
Preference number: 4 (lower is better)
Translates to: CCIRTHKYRRGFPRSMPGRHTHL*APCLPS
Trigger: ACTTGGAAGACACGGTGCCCATAAATGTGTGTGGCG...TCCTGGCATCGACCTTGGAAAGCCTCTGCGATACTTGTGTGTACGAATACAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR CCA 90 bp AGTGTCCCAAACTCCTTCACAAGAGCATGGACTGCAGGCCATGGAGACACAGAGAAAGTGAACCCTCTTTaGGTTCCTCTCACACAAAGG +
Preference number: 4 (lower is better)
Translates to: SVPNSFTRAWTAGHGDTEKVNPL*VPLTQR
Trigger: CCTTTGTGTGAGAGGAACCCAAAGAGGGTTCACTTT...CTCTGTGTCTCCATGGCCTGCAGTCCATGCTCTTGTGAAGGAGTTTGGGACACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR TCA 90 bp TGCTGTATTCGTACACACAAGTATCGCAGAGGCTTTCCAAGGTCGATGCCAGGACAGAAACCCTGGGGCTaGGCTAGTTTAAAATGTCGT +
Preference number: 4 (lower is better)
Translates to: CCIRTHKYRRGFPRSMPGQKPWG*ASLKCR
Trigger: ACGACATTTTAAACTAGCTCAGCCCCAGGGTTTCTG...TCCTGGCATCGACCTTGGAAAGCCTCTGCGATACTTGTGTGTACGAATACAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR TCA 90 bp GACATAATCCTGAAAACCCAGTCAGGGGCTGGGTGCACTGTCAGTGAGGAGTTTAACTTTCTAACTGACTaGTCAAATCCCAGGGACGAC +
Preference number: 4 (lower is better)
Translates to: DIILKTQSGAGCTVSEEFNFLTD*SNPRDD
Trigger: GTCGTCCCTGGGATTTGATCAGTCAGTTAGAAAGTT...AAACTCCTCACTGACAGTGCACCCAGCCCCTGACTGGGTTTTCAGGATTATGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR TCA 90 bp TTCGGCTTAAGAAACACACTCCCACCCCACATCCCGTCTTTTAAGCTTCATCTCGGGCACCAGAAGTCTTaGTCCATGCTCTTCTCCTTT +
Preference number: 4 (lower is better)
Translates to: FGLRNTLPPHIPSFKLHLGHQKS*SMLFSF
Trigger: AAAGGAGAAGAGCATGGATCAAGACTTCTGGTGCCC...GAGATGAAGCTTAAAAGACGGGATGTGGGGTGGGAGTGTGTTTCTTAAGCCGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR TCA 90 bp TATCATCTCCCCCTTCTTAGTGTGGTGGGTCCCAGAGTGGACCAACCCACACTCTTTATAATCTGGAAATaGCTGCTTTTCCCCTTGCTG +
Preference number: 4 (lower is better)
Translates to: YHLPLLSVVGPRVDQPTLFIIWK*LLFPLL
Trigger: CAGCAAGGGGAAAAGCAGTCATTTCCAGATTATAAA...GAGTGTGGGTTGGTCCACTCTGGGACCCACCACACTAAGAAGGGGGAGATGATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR GCA 90 bp AGGCGCCTCAGCCCTTATTTGGTACTACCAGGTGACTTCAATGATTCACCAGCTGGCTTCTTCATCACATaGTCTGACCTTCCTCCAACT +
Preference number: 4 (lower is better)
Translates to: RRLSPYLVLPGDFNDSPAGFFIT*SDLPPT
Trigger: AGTTGGAGGAAGGTCAGAGCATGTGATGAAGAAGCC...AGCTGGTGAATCATTGAAGTCACCTGGTAGTACCAAATAAGGGCTGAGGCGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR GCA 90 bp AGTAGTTGTTTCAACAGATCAGCTTCATCCTTTTTCTTCAGAAGCCCCAAACCGCTTCCAGTGTGCCCGTaGTGGCTGCCTCTCACATCA +
Preference number: 4 (lower is better)
Translates to: SSCFNRSASSFFFRSPKPLPVCP*WLPLTS
Trigger: TGATGTGAGAGGCAGCCAGCACGGGCACACTGGAAG...CGGTTTGGGGCTTCTGAAGAAAAAGGATGAAGCTGATCTGTTGAAACAACTACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR GCA 90 bp AGGCGCCTCAGCCCTTATTTGGTACTACCAGGTGACTTCAATGATTCACCAGCTTCCCGCACTTATTGCTaGTGTGAAAACTGGAGTGCA +
Preference number: 4 (lower is better)
Translates to: RRLSPYLVLPGDFNDSPASRTYC*CENWSA
Trigger: TGCACTCCAGTTTTCACAGCAGCAATAAGTGCGGGA...AGCTGGTGAATCATTGAAGTCACCTGGTAGTACCAAATAAGGGCTGAGGCGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR GCA 90 bp GACATAATCCTGAAAACCCAGTCAGGGGCTGGGTGCACTGTCAGTGAGGAGTTTGTTTCCCGCACTTATTaGTGCTGTGAAAACTGGAGT +
Preference number: 4 (lower is better)
Translates to: DIILKTQSGAGCTVSEEFVSRTY*CCENWS
Trigger: ACTCCAGTTTTCACAGCAGCAATAAGTGCGGGAAAC...AAACTCCTCACTGACAGTGCACCCAGCCCCTGACTGGGTTTTCAGGATTATGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR GCA 90 bp AGGCGCCTCAGCCCTTATTTGGTACTACCAGGTGACTTCAATGATTCACCAGCTTCTATCAGCCCCTTTTaGCTCCGAGTTGGGAAAGTA +
Preference number: 4 (lower is better)
Translates to: RRLSPYLVLPGDFNDSPASISPF*LRVGKV
Trigger: TACTTTCCCAACTCGGAGGCAAAAGGGGCTGATAGA...AGCTGGTGAATCATTGAAGTCACCTGGTAGTACCAAATAAGGGCTGAGGCGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR GCA 90 bp TGCTGTATTCGTACACACAAGTATCGCAGAGGCTTTCCAAGGTCGATGCCAGGAAAGGACCTCCCGCCATaGAGATTCTTAAAGGTCACT +
Preference number: 4 (lower is better)
Translates to: CCIRTHKYRRGFPRSMPGKDLPP*RFLKVT
Trigger: AGTGACCTTTAAGAATCTGCATGGCGGGAGGTCCTT...TCCTGGCATCGACCTTGGAAAGCCTCTGCGATACTTGTGTGTACGAATACAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR GCA 90 bp AGTAGTTGTTTCAACAGATCAGCTTCATCCTTTTTCTTCAGAAGCCCCAAACCGTGCAGGAGCCTTGGCTaGCTTCCCACACTGCTGATG +
Preference number: 4 (lower is better)
Translates to: SSCFNRSASSFFFRSPKPCRSLG*LPTLLM
Trigger: CATCAGCAGTGTGGGAAGGCAGCCAAGGCTCCTGCA...CGGTTTGGGGCTTCTGAAGAAAAAGGATGAAGCTGATCTGTTGAAACAACTACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR GCA 90 bp GACATAATCCTGAAAACCCAGTCAGGGGCTGGGTGCACTGTCAGTGAGGAGTTTTTGCCTTTGTCTCCTTaGTCCGTGACAATGAATGTC +
Preference number: 4 (lower is better)
Translates to: DIILKTQSGAGCTVSEEFLPLSP*SVTMNV
Trigger: GACATTCATTGTCACGGAGCAAGGAGACAAAGGCAA...AAACTCCTCACTGACAGTGCACCCAGCCCCTGACTGGGTTTTCAGGATTATGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR GCA 90 bp TATCGCAGAGGCTTTCCAAGGTCGATGCCAGGAATCTGCAGGAGCCTTGGCTGCTTCATTTCTGTTTGCTaGCATATGCTTCTCAACTTG +
Preference number: 4 (lower is better)
Translates to: YRRGFPRSMPGICRSLGCFISVC*HMLLNL
Trigger: CAAGTTGAGAAGCATATGGCAGCAAACAGAAATGAA...GCAGCCAAGGCTCCTGCAGATTCCTGGCATCGACCTTGGAAAGCCTCTGCGATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR GCA 90 bp GACATAATCCTGAAAACCCAGTCAGGGGCTGGGTGCACTGTCAGTGAGGAGTTTGCTCATTATTCTTCATaGACCCTCACCTCTCATCAC +
Preference number: 4 (lower is better)
Translates to: DIILKTQSGAGCTVSEEFAHYSS*TLTSHH
Trigger: GTGATGAGAGGTGAGGGTGCATGAAGAATAATGAGC...AAACTCCTCACTGACAGTGCACCCAGCCCCTGACTGGGTTTTCAGGATTATGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR CCA 90 bp AGGCGCCTCAGCCCTTATTTGGTACTACCAGGTGACTTCAATGATTCACCAGCTACTGTACATGATGCCTaGGCTTCAGCAAAGCTCAAC +
Preference number: 4 (lower is better)
Translates to: RRLSPYLVLPGDFNDSPATVHDA*ASAKLN
Trigger: GTTGAGCTTTGCTGAAGCCCAGGCATCATGTACAGT...AGCTGGTGAATCATTGAAGTCACCTGGTAGTACCAAATAAGGGCTGAGGCGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR CCA 90 bp TTCGGCTTAAGAAACACACTCCCACCCCACATCCCGTCTTTTAAGCTTCATCTCCGTGGAGTCCAAATTTaGTGCGCAAGTGGGAGGATA +
Preference number: 4 (lower is better)
Translates to: FGLRNTLPPHIPSFKLHLRGVQI*CASGRI
Trigger: TATCCTCCCACTTGCGCACCAAATTTGGACTCCACG...GAGATGAAGCTTAAAAGACGGGATGTGGGGTGGGAGTGTGTTTCTTAAGCCGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR CCA 90 bp AGTAGTTGTTTCAACAGATCAGCTTCATCCTTTTTCTTCAGAAGCCCCAAACCGCGGAGGCACGTACACTaGAGGTTCCAATCCAGGGTC +
Preference number: 4 (lower is better)
Translates to: SSCFNRSASSFFFRSPKPRRHVH*RFQSRV
Trigger: GACCCTGGATTGGAACCTCCAGTGTACGTGCCTCCG...CGGTTTGGGGCTTCTGAAGAAAAAGGATGAAGCTGATCTGTTGAAACAACTACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR CCA 90 bp TGCTGTATTCGTACACACAAGTATCGCAGAGGCTTTCCAAGGTCGATGCCAGGATTGCAAGGACTCACCTaGGGGGATTTCTATTGTGCT +
Preference number: 4 (lower is better)
Translates to: CCIRTHKYRRGFPRSMPGLQGLT*GDFYCA
Trigger: AGCACAATAGAAATCCCCCCAGGTGAGTCCTTGCAA...TCCTGGCATCGACCTTGGAAAGCCTCTGCGATACTTGTGTGTACGAATACAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR CCA 90 bp TATCGCAGAGGCTTTCCAAGGTCGATGCCAGGAATCTGCAGGAGCCTTGGCTGCTGCTATAAAAACAGATaGTTTCAACGGACGATTGCT +
Preference number: 4 (lower is better)
Translates to: YRRGFPRSMPGICRSLGCCYKNR*FQRTIA
Trigger: AGCAATCGTCCGTTGAAACCATCTGTTTTTATAGCA...GCAGCCAAGGCTCCTGCAGATTCCTGGCATCGACCTTGGAAAGCCTCTGCGATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR CCA 90 bp AGGCGCCTCAGCCCTTATTTGGTACTACCAGGTGACTTCAATGATTCACCAGCTCCAATGGTGTCTTTCTaGGACCCTTTCTACCTGTCT +
Preference number: 4 (lower is better)
Translates to: RRLSPYLVLPGDFNDSPAPMVSF*DPFYLS
Trigger: AGACAGGTAGAAAGGGTCCCAGAAAGACACCATTGG...AGCTGGTGAATCATTGAAGTCACCTGGTAGTACCAAATAAGGGCTGAGGCGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR TCA 90 bp AGCAGTTATGCACATGGACATAATCCTGAAAACCCAGTCAGGGGCTGGGTGCACAACACATGTTCTCCTTaGATGAATGGGTACAGGTCT +
Preference number: 4 (lower is better)
Translates to: SSYAHGHNPENPVRGWVHNTCSP*MNGYRS
Trigger: AGACCTGTACCCATTCATTCAAGGAGAACATGTGTT...GTGCACCCAGCCCCTGACTGGGTTTTCAGGATTATGTCCATGTGCATAACTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR TCA 90 bp AGTAGTTGTTTCAACAGATCAGCTTCATCCTTTTTCTTCAGAAGCCCCAAACCGATCATACGGTACAGATaGGAACAGGCCGGGACAGCC +
Preference number: 4 (lower is better)
Translates to: SSCFNRSASSFFFRSPKPIIRYR*EQAGTA
Trigger: GGCTGTCCCGGCCTGTTCTCATCTGTACCGTATGAT...CGGTTTGGGGCTTCTGAAGAAAAAGGATGAAGCTGATCTGTTGAAACAACTACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR GCA 90 bp AGTGTCCCAAACTCCTTCACAAGAGCATGGACTGCAGGCCATGGAGACACAGAGTGCTTGAGTTCTCTGTaGTTTGTAAGGTGGATGAAA +
Preference number: 4 (lower is better)
Translates to: SVPNSFTRAWTAGHGDTECLSSL*FVRWMK
Trigger: TTTCATCCACCTTACAAAGCACAGAGAACTCAAGCA...CTCTGTGTCTCCATGGCCTGCAGTCCATGCTCTTGTGAAGGAGTTTGGGACACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR GCA 90 bp AGTAGTTGTTTCAACAGATCAGCTTCATCCTTTTTCTTCAGAAGCCCCAAACCGAGAGTTGTTTACTGTTaGAAGGGCCCGTGGGCTCCC +
Preference number: 4 (lower is better)
Translates to: SSCFNRSASSFFFRSPKPRVVYC*KGPWAP
Trigger: GGGAGCCCACGGGCCCTTGCAACAGTAAACAACTCT...CGGTTTGGGGCTTCTGAAGAAAAAGGATGAAGCTGATCTGTTGAAACAACTACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR GCA 90 bp AGGCGCCTCAGCCCTTATTTGGTACTACCAGGTGACTTCAATGATTCACCAGCTGATTTCTATTGTGCTTaGTTCACCCAAAGACCCCTC +
Preference number: 4 (lower is better)
Translates to: RRLSPYLVLPGDFNDSPADFYCA*FTQRPL
Trigger: GAGGGGTCTTTGGGTGAAGCAAGCACAATAGAAATC...AGCTGGTGAATCATTGAAGTCACCTGGTAGTACCAAATAAGGGCTGAGGCGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR GCA 90 bp TTCGGCTTAAGAAACACACTCCCACCCCACATCCCGTCTTTTAAGCTTCATCTCGGGGGATTTCTATTGTaGTTGCTTCACCCAAAGACC +
Preference number: 4 (lower is better)
Translates to: FGLRNTLPPHIPSFKLHLGGFLL*LLHPKT
Trigger: GGTCTTTGGGTGAAGCAAGCACAATAGAAATCCCCC...GAGATGAAGCTTAAAAGACGGGATGTGGGGTGGGAGTGTGTTTCTTAAGCCGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR CCA 90 bp AGGCGCCTCAGCCCTTATTTGGTACTACCAGGTGACTTCAATGATTCACCAGCTACAATTCTGCTGCACTaGTCACTTTGCAAGAGATGC +
Preference number: 4 (lower is better)
Translates to: RRLSPYLVLPGDFNDSPATILLH*SLCKRC
Trigger: GCATCTCTTGCAAAGTGACCAGTGCAGCAGAATTGT...AGCTGGTGAATCATTGAAGTCACCTGGTAGTACCAAATAAGGGCTGAGGCGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR TCA 90 bp CTGCCTTCCCACACTGCTGATGAACCAAGGACTGTTTCGACAGGCAGGTTGCTAGACTTCCCTTTGTTTTaGGAATTCAACACATGTTCT +
Preference number: 4 (lower is better)
Translates to: LPSHTADEPRTVSTGRLLDFPLF*EFNTCS
Trigger: AGAACATGTGTTGAATTCTCAAAACAAAGGGAAGTC...TAGCAACCTGCCTGTCGAAACAGTCCTTGGTTCATCAGCAGTGTGGGAAGGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR TCA 90 bp GACATAATCCTGAAAACCCAGTCAGGGGCTGGGTGCACTGTCAGTGAGGAGTTTCAAGAGGCCTCAATCTaGATTTATGGTCTTAATGAC +
Preference number: 4 (lower is better)
Translates to: DIILKTQSGAGCTVSEEFQEASI*IYGLND
Trigger: GTCATTAAGACCATAAATTCAGATTGAGGCCTCTTG...AAACTCCTCACTGACAGTGCACCCAGCCCCTGACTGGGTTTTCAGGATTATGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR TCA 90 bp GACATAATCCTGAAAACCCAGTCAGGGGCTGGGTGCACTGTCAGTGAGGAGTTTATATGCTTCTCAACTTaGACTTGCCTTTGTCTCCTT +
Preference number: 4 (lower is better)
Translates to: DIILKTQSGAGCTVSEEFICFST*TCLCLL
Trigger: AAGGAGACAAAGGCAAGTTCAAGTTGAGAAGCATAT...AAACTCCTCACTGACAGTGCACCCAGCCCCTGACTGGGTTTTCAGGATTATGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR GCA 90 bp AGTAGTTGTTTCAACAGATCAGCTTCATCCTTTTTCTTCAGAAGCCCCAAACCGAGGAAATGGGCTACCTaGCAGCTCGTCCATTCCGTT +
Preference number: 4 (lower is better)
Translates to: SSCFNRSASSFFFRSPKPRKWAT*QLVHSV
Trigger: AACGGAATGGACGAGCTGGCAGGTAGCCCATTTCCT...CGGTTTGGGGCTTCTGAAGAAAAAGGATGAAGCTGATCTGTTGAAACAACTACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR GCA 90 bp AGTAGTTGTTTCAACAGATCAGCTTCATCCTTTTTCTTCAGAAGCCCCAAACCGTTTTGTGCTGCCGGATaGTCCTTCTCTTCCCTGGAG +
Preference number: 4 (lower is better)
Translates to: SSCFNRSASSFFFRSPKPFCAAG*SFSSLE
Trigger: CTCCAGGGAAGAGAAGGAGCATCCGGCAGCACAAAA...CGGTTTGGGGCTTCTGAAGAAAAAGGATGAAGCTGATCTGTTGAAACAACTACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR GCA 90 bp AGTGTCCCAAACTCCTTCACAAGAGCATGGACTGCAGGCCATGGAGACACAGAGGTTTTCATTTCTGTTTaGTGCCATATGCTTCTCAAC +
Preference number: 4 (lower is better)
Translates to: SVPNSFTRAWTAGHGDTEVFISV*CHMLLN
Trigger: GTTGAGAAGCATATGGCAGCAAACAGAAATGAAAAC...CTCTGTGTCTCCATGGCCTGCAGTCCATGCTCTTGTGAAGGAGTTTGGGACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR CCA 90 bp CTGCCTTCCCACACTGCTGATGAACCAAGGACTGTTTCGACAGGCAGGTTGCTATCTTTTGATCAGCACTaGGCTTTAAGTCATTGTTGT +
Preference number: 4 (lower is better)
Translates to: LPSHTADEPRTVSTGRLLSFDQH*ALSHCC
Trigger: ACAACAATGACTTAAAGCCCAGTGCTGATCAAAAGA...TAGCAACCTGCCTGTCGAAACAGTCCTTGGTTCATCAGCAGTGTGGGAAGGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR CCA 90 bp CTGCCTTCCCACACTGCTGATGAACCAAGGACTGTTTCGACAGGCAGGTTGCTACATGACAATGTTGGCTaGTTTTCAGAGGGTTATTTT +
Preference number: 4 (lower is better)
Translates to: LPSHTADEPRTVSTGRLLHDNVG*FSEGYF
Trigger: AAAATAACCCTCTGAAAACCAGCCAACATTGTCATG...TAGCAACCTGCCTGTCGAAACAGTCCTTGGTTCATCAGCAGTGTGGGAAGGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR CCA 90 bp AGGCGCCTCAGCCCTTATTTGGTACTACCAGGTGACTTCAATGATTCACCAGCTCTTTTGCCTCCGAGTTaGGAAAGTAGTTGTTTCAAC +
Preference number: 4 (lower is better)
Translates to: RRLSPYLVLPGDFNDSPALLPPS*ESSCFN
Trigger: GTTGAAACAACTACTTTCCCAACTCGGAGGCAAAAG...AGCTGGTGAATCATTGAAGTCACCTGGTAGTACCAAATAAGGGCTGAGGCGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375377.2
3UTR CAA 72 bp CCATATGCTTCTCAACTTGAACTTGCCTTTGTCTCCTaGCTCCGTGACAATGAATGTCTCACATCTCGGCTC +
Preference number: 4 (lower is better)
Translates to: PYASQLELAFVS*LRDNECLTSRL
Trigger: GAGCCGAGATGTGAGACATTCATTGTCACGGAGCAAGGAGACAAAGGCAAGTTCAAGTTGAGAAGCATATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR TCA 90 bp AGCAGTTATGCACATGGACATAATCCTGAAAACCCAGTCAGGGGCTGGGTGCACTTAAAACTTTCTAACTaGCTGATCAAATCCCAGGGA +
Preference number: 4 (lower is better)
Translates to: SSYAHGHNPENPVRGWVHLKLSN*LIKSQG
Trigger: TCCCTGGGATTTGATCAGTCAGTTAGAAAGTTTTAA...GTGCACCCAGCCCCTGACTGGGTTTTCAGGATTATGTCCATGTGCATAACTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR TCA 90 bp AGGCGCCTCAGCCCTTATTTGGTACTACCAGGTGACTTCAATGATTCACCAGCTAATCTTCACCCAGAATaGGAGCAACACCAAACTATT +
Preference number: 4 (lower is better)
Translates to: RRLSPYLVLPGDFNDSPANLHPE*EQHQTI
Trigger: AATAGTTTGGTGTTGCTCTCATTCTGGGTGAAGATT...AGCTGGTGAATCATTGAAGTCACCTGGTAGTACCAAATAAGGGCTGAGGCGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR TCA 90 bp GACATAATCCTGAAAACCCAGTCAGGGGCTGGGTGCACTGTCAGTGAGGAGTTTATGGATCATACCTATTaGTTCACATTTCCCCTAAAC +
Preference number: 4 (lower is better)
Translates to: DIILKTQSGAGCTVSEEFMDHTY*FTFPLN
Trigger: GTTTAGGGGAAATGTGAATCAATAGGTATGATCCAT...AAACTCCTCACTGACAGTGCACCCAGCCCCTGACTGGGTTTTCAGGATTATGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR GCA 90 bp AGTAGTTGTTTCAACAGATCAGCTTCATCCTTTTTCTTCAGAAGCCCCAAACCGTCTTCTCTGCACTCGTaGTTCCATCTGCTGAGCAGA +
Preference number: 4 (lower is better)
Translates to: SSCFNRSASSFFFRSPKPSSLHS*FHLLSR
Trigger: TCTGCTCAGCAGATGGAAGCACGAGTGCAGAGAAGA...CGGTTTGGGGCTTCTGAAGAAAAAGGATGAAGCTGATCTGTTGAAACAACTACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR GCA 90 bp AGTAGTTGTTTCAACAGATCAGCTTCATCCTTTTTCTTCAGAAGCCCCAAACCGCAATTCGCAACGGAATaGAAGCTCCACCGGCATTTC +
Preference number: 4 (lower is better)
Translates to: SSCFNRSASSFFFRSPKPQFATE*KLHRHF
Trigger: GAAATGCCGGTGGAGCTTGCATTCCGTTGCGAATTG...CGGTTTGGGGCTTCTGAAGAAAAAGGATGAAGCTGATCTGTTGAAACAACTACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR CCA 90 bp AGGCGCCTCAGCCCTTATTTGGTACTACCAGGTGACTTCAATGATTCACCAGCTTCACCAACAGTAAAATaGGGCAGCAAAAGTTCTACT +
Preference number: 4 (lower is better)
Translates to: RRLSPYLVLPGDFNDSPASPTVK*GSKSST
Trigger: AGTAGAACTTTTGCTGCCCCATTTTACTGTTGGTGA...AGCTGGTGAATCATTGAAGTCACCTGGTAGTACCAAATAAGGGCTGAGGCGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR TCA 90 bp TTCGGCTTAAGAAACACACTCCCACCCCACATCCCGTCTTTTAAGCTTCATCTCAATCTACCAGCTACTTaGGAATACTCAATTCGCAAC +
Preference number: 4 (lower is better)
Translates to: FGLRNTLPPHIPSFKLHLNLPAT*EYSIRN
Trigger: GTTGCGAATTGAGTATTCTCAAGTAGCTGGTAGATT...GAGATGAAGCTTAAAAGACGGGATGTGGGGTGGGAGTGTGTTTCTTAAGCCGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR TCA 90 bp TTCGGCTTAAGAAACACACTCCCACCCCACATCCCGTCTTTTAAGCTTCATCTCTGGCGTGTTTGCAAATaGTCAAAATATTTCACTGCC +
Preference number: 4 (lower is better)
Translates to: FGLRNTLPPHIPSFKLHLWRVCK*SKYFTA
Trigger: GGCAGTGAAATATTTTGATCATTTGCAAACACGCCA...GAGATGAAGCTTAAAAGACGGGATGTGGGGTGGGAGTGTGTTTCTTAAGCCGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR TCA 90 bp TGCTGTATTCGTACACACAAGTATCGCAGAGGCTTTCCAAGGTCGATGCCAGGACATCACATTTTGGTTTaGGAATCACAGAAGGTACAA +
Preference number: 4 (lower is better)
Translates to: CCIRTHKYRRGFPRSMPGHHILV*ESQKVQ
Trigger: TTGTACCTTCTGTGATTCTCAAACCAAAATGTGATG...TCCTGGCATCGACCTTGGAAAGCCTCTGCGATACTTGTGTGTACGAATACAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR GCA 90 bp TTCGGCTTAAGAAACACACTCCCACCCCACATCCCGTCTTTTAAGCTTCATCTCATAGATAATACTGAGTaGAAAGCAGACAATGGCGTG +
Preference number: 4 (lower is better)
Translates to: FGLRNTLPPHIPSFKLHLIDNTE*KADNGV
Trigger: CACGCCATTGTCTGCTTTGCACTCAGTATTATCTAT...GAGATGAAGCTTAAAAGACGGGATGTGGGGTGGGAGTGTGTTTCTTAAGCCGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR GCA 90 bp AGCAGTTATGCACATGGACATAATCCTGAAAACCCAGTCAGGGGCTGGGTGCACACTTCCTTAAAAATCTaGCGCCTAACAATTGTTTAC +
Preference number: 4 (lower is better)
Translates to: SSYAHGHNPENPVRGWVHTSLKI*RLTIVY
Trigger: GTAAACAATTGTTAGGCGGCAGATTTTTAAGGAAGT...GTGCACCCAGCCCCTGACTGGGTTTTCAGGATTATGTCCATGTGCATAACTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR CCA 90 bp AGTAGTTGTTTCAACAGATCAGCTTCATCCTTTTTCTTCAGAAGCCCCAAACCGTCTCAGAATTCCTCGTaGAGTCCAAATTTGGTGCGC +
Preference number: 4 (lower is better)
Translates to: SSCFNRSASSFFFRSPKPSQNSS*SPNLVR
Trigger: GCGCACCAAATTTGGACTCCACGAGGAATTCTGAGA...CGGTTTGGGGCTTCTGAAGAAAAAGGATGAAGCTGATCTGTTGAAACAACTACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR CCA 90 bp TTCGGCTTAAGAAACACACTCCCACCCCACATCCCGTCTTTTAAGCTTCATCTCAAAATGATCACAGTCTaGTTTCTGAGTCATCTGAGT +
Preference number: 4 (lower is better)
Translates to: FGLRNTLPPHIPSFKLHLKMITV*FLSHLS
Trigger: ACTCAGATGACTCAGAAACCAGACTGTGATCATTTT...GAGATGAAGCTTAAAAGACGGGATGTGGGGTGGGAGTGTGTTTCTTAAGCCGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR TCA 90 bp AGTAGTTGTTTCAACAGATCAGCTTCATCCTTTTTCTTCAGAAGCCCCAAACCGCATGTTCTCCTTGAATaGATGGGTACAGGTCTTGAA +
Preference number: 4 (lower is better)
Translates to: SSCFNRSASSFFFRSPKPHVLLE*MGTGLE
Trigger: TTCAAGACCTGTACCCATTCATTCAAGGAGAACATG...CGGTTTGGGGCTTCTGAAGAAAAAGGATGAAGCTGATCTGTTGAAACAACTACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR GCA 90 bp AGTAGTTGTTTCAACAGATCAGCTTCATCCTTTTTCTTCAGAAGCCCCAAACCGGAAAGACAATTCTGCTaGACTGGTCACTTTGCAAGA +
Preference number: 4 (lower is better)
Translates to: SSCFNRSASSFFFRSPKPERQFC*TGHFAR
Trigger: TCTTGCAAAGTGACCAGTGCAGCAGAATTGTCTTTC...CGGTTTGGGGCTTCTGAAGAAAAAGGATGAAGCTGATCTGTTGAAACAACTACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR CCA 90 bp AGTAGTTGTTTCAACAGATCAGCTTCATCCTTTTTCTTCAGAAGCCCCAAACCGCCTTGCTGGGACATATaGTTTTCATTTCTGTTTGCT +
Preference number: 4 (lower is better)
Translates to: SSCFNRSASSFFFRSPKPPCWDI*FSFLFA
Trigger: AGCAAACAGAAATGAAAACCATATGTCCCAGCAAGG...CGGTTTGGGGCTTCTGAAGAAAAAGGATGAAGCTGATCTGTTGAAACAACTACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR CCA 90 bp AGTAGTTGTTTCAACAGATCAGCTTCATCCTTTTTCTTCAGAAGCCCCAAACCGGTTCTTTCTACAAAATaGAATAAAGTGGACCTGAAG +
Preference number: 4 (lower is better)
Translates to: SSCFNRSASSFFFRSPKPVLSTK*NKVDLK
Trigger: CTTCAGGTCCACTTTATTCCATTTTGTAGAAAGAAC...CGGTTTGGGGCTTCTGAAGAAAAAGGATGAAGCTGATCTGTTGAAACAACTACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR CCA 90 bp AGTAGTTGTTTCAACAGATCAGCTTCATCCTTTTTCTTCAGAAGCCCCAAACCGATAAGAGCTGAATTCTaGACTGCAGATAAGTGTTTT +
Preference number: 4 (lower is better)
Translates to: SSCFNRSASSFFFRSPKPIRAEF*TADKCF
Trigger: AAAACACTTATCTGCAGTCCAGAATTCAGCTCTTAT...CGGTTTGGGGCTTCTGAAGAAAAAGGATGAAGCTGATCTGTTGAAACAACTACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS GCA 90 bp GAGCACGGTTCTCCTGCTGCGGCTCCGCCTCACTCTCCTCACTGCTaGTGCTGCTGCTGCTGCTGCTACTGCTGCTTTCTTCCTCTTCCT +
Preference number: 5 (lower is better)
Translates to: EHGSPAAAPPHSPHC*CCCCCCYCCFLPLP
Trigger: AGGAAGAGGAAGAAAGCAGCAGTAGCAGCAGCAGCAGCAGCAGCAGCAGTGAGGAGAGTGAGGCGGAGCCGCAGCAGGAGAACCGTGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR CAA 90 bp TATCGCAGAGGCTTTCCAAGGTCGATGCCAGGAATCTGCAGGAGCCTTGGCTGCCCTTGCAGCCCTGGCTaGCAAGGACTCACCTGGGGG +
Preference number: 5 (lower is better)
Translates to: YRRGFPRSMPGICRSLGCPCSPG*QGLTWG
Trigger: CCCCCAGGTGAGTCCTTGCAAGCCAGGGCTGCAAGG...GCAGCCAAGGCTCCTGCAGATTCCTGGCATCGACCTTGGAAAGCCTCTGCGATA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS GCA 90 bp GTGAGTAAGGGGAGGAAACTTGTCTTCCAGTGTGCCCGTGCTGGCTaGCTCTCACATCAGGCCACTGTCCCCTTGCCACACAGCGGTCTC +
Preference number: 5 (lower is better)
Translates to: VSKGRKLVFQCARAG*LSHQATVPLPHSGL
Trigger: GAGACCGCTGTGTGGCAAGGGGACAGTGGCCTGATGTGAGAGGCAGCCAGCACGGGCACACTGGAAGACAAGTTTCCTCCCCTTACTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR CAA 90 bp TATCATCTCCCCCTTCTTAGTGTGGTGGGTCCCAGAGTGGACCAACCCACACTCGCTGCCTGGCGCCCCTaGGGGTTATCCTCGCGTGAT +
Preference number: 5 (lower is better)
Translates to: YHLPLLSVVGPRVDQPTLAAWRP*GLSSRD
Trigger: ATCACGCGAGGATAACCCCAAGGGGCGCCAGGCAGC...GAGTGTGGGTTGGTCCACTCTGGGACCCACCACACTAAGAAGGGGGAGATGATA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR CAA 90 bp TATCATCTCCCCCTTCTTAGTGTGGTGGGTCCCAGAGTGGACCAACCCACACTCAGGCAGGCTGTGGGCTaGGGCCATTCCTCTGGCCTC +
Preference number: 5 (lower is better)
Translates to: YHLPLLSVVGPRVDQPTLRQAVG*GHSSGL
Trigger: GAGGCCAGAGGAATGGCCCAAGCCCACAGCCTGCCT...GAGTGTGGGTTGGTCCACTCTGGGACCCACCACACTAAGAAGGGGGAGATGATA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR CAA 90 bp TATCATCTCCCCCTTCTTAGTGTGGTGGGTCCCAGAGTGGACCAACCCACACTCACTGGCACCCTGTTCTaGCCCAGGGGTGAGCCCCAC +
Preference number: 5 (lower is better)
Translates to: YHLPLLSVVGPRVDQPTLTGTLF*PRGEPH
Trigger: GTGGGGCTCACCCCTGGGCAAGAACAGGGTGCCAGT...GAGTGTGGGTTGGTCCACTCTGGGACCCACCACACTAAGAAGGGGGAGATGATA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS TCA 90 bp GCTAACCTCCAGGTGTCTCTTCTCTGCACTCGTGCTTCCATCTGCTaGGCAGAAAGGTGCACCGCCACCTTCTTCCACGCGAAAGCGGCC +
Preference number: 5 (lower is better)
Translates to: ANLQVSLLCTRASIC*AERCTATFFHAKAA
Trigger: GGCCGCTTTCGCGTGGAAGAAGGTGGCGGTGCACCTTTCTGCTCAGCAGATGGAAGCACGAGTGCAGAGAAGAGACACCTGGAGGTTAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS CCA 90 bp TCCTTCTCTTCCCTGGAGATGCTGTCCTTGGACACAGAGAGTGAGTaGCCCAATCTCTGGGCACGGTCCCCACTGCCAGGAGACACAAGG +
Preference number: 5 (lower is better)
Translates to: SFSSLEMLSLDTESE*PNLWARSPLPGDTR
Trigger: CCTTGTGTCTCCTGGCAGTGGGGACCGTGCCCAGAGATTGGGCCACTCACTCTCTGTGTCCAAGGACAGCATCTCCAGGGAAGAGAAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS GCA 90 bp CTGATCAAATCCCAGGGACGACGGCTGACCGGTTTCAGGAGAAACTaGCCAAAGAGTTGTTTACTGTTGCAAGGGCCCGTGGGCTCCCCC +
Preference number: 5 (lower is better)
Translates to: LIKSQGRRLTGFRRN*PKSCLLLQGPVGSP
Trigger: GGGGGAGCCCACGGGCCCTTGCAACAGTAAACAACTCTTTGGGCAGTTTCTCCTGAAACCGGTCAGCCGTCGTCCCTGGGATTTGATCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR CAA 90 bp CTGCCTTCCCACACTGCTGATGAACCAAGGACTGTTTCGACAGGCAGGTTGCTACAGGCCACTGTCCCCTaGCCACACAGCGGTCTCTCT +
Preference number: 5 (lower is better)
Translates to: LPSHTADEPRTVSTGRLLQATVP*PHSGLS
Trigger: AGAGAGACCGCTGTGTGGCAAGGGGACAGTGGCCTG...TAGCAACCTGCCTGTCGAAACAGTCCTTGGTTCATCAGCAGTGTGGGAAGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR CAA 90 bp AGTGTCCCAAACTCCTTCACAAGAGCATGGACTGCAGGCCATGGAGACACAGAGTCTTCTCCGGTAGGCTaGGTCGTTACCAGTCGGGGG +
Preference number: 5 (lower is better)
Translates to: SVPNSFTRAWTAGHGDTESSPVG*VVTSRG
Trigger: CCCCCGACTGGTAACGACCAAGCCTACCGGAGAAGA...CTCTGTGTCTCCATGGCCTGCAGTCCATGCTCTTGTGAAGGAGTTTGGGACACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR CAA 90 bp TATCGCAGAGGCTTTCCAAGGTCGATGCCAGGAATCTGCAGGAGCCTTGGCTGCGTAAGGGGAGGAAACTaGTCTTCCAGTGTGCCCGTG +
Preference number: 5 (lower is better)
Translates to: YRRGFPRSMPGICRSLGCVRGGN*SSSVPV
Trigger: CACGGGCACACTGGAAGACAAGTTTCCTCCCCTTAC...GCAGCCAAGGCTCCTGCAGATTCCTGGCATCGACCTTGGAAAGCCTCTGCGATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR CAA 90 bp GACATAATCCTGAAAACCCAGTCAGGGGCTGGGTGCACTGTCAGTGAGGAGTTTGACTTCGGCCTGCTTTaGGCGTCGGTGCCTGGTCCA +
Preference number: 5 (lower is better)
Translates to: DIILKTQSGAGCTVSEEFDFGLL*ASVPGP
Trigger: TGGACCAGGCACCGACGCCAAAAGCAGGCCGAAGTC...AAACTCCTCACTGACAGTGCACCCAGCCCCTGACTGGGTTTTCAGGATTATGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS CCA 90 bp GCCGGGGAAATGGGGCTGAGCAGCCACTCTTCTCAGAATTCCTCGTaGAGTCCAAATTTGGTGCGCAAGTGGGAGGATACGGTGGCATTT +
Preference number: 5 (lower is better)
Translates to: AGEMGLSSHSSQNSS*SPNLVRKWEDTVAF
Trigger: AAATGCCACCGTATCCTCCCACTTGCGCACCAAATTTGGACTCCACGAGGAATTCTGAGAAGAGTGGCTGCTCAGCCCCATTTCCCCGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR CAA 90 bp AGCAGTTATGCACATGGACATAATCCTGAAAACCCAGTCAGGGGCTGGGTGCACCAGCGGTCTCTCTGGTaGGGGAGGCCACTGTTTTCC +
Preference number: 5 (lower is better)
Translates to: SSYAHGHNPENPVRGWVHQRSLW*GRPLFS
Trigger: GGAAAACAGTGGCCTCCCCAACCAGAGAGACCGCTG...GTGCACCCAGCCCCTGACTGGGTTTTCAGGATTATGTCCATGTGCATAACTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR CAA 90 bp AGGCGCCTCAGCCCTTATTTGGTACTACCAGGTGACTTCAATGATTCACCAGCTGGTCGGAGACTGCTGTaGACTGTGACCGCCACACAC +
Preference number: 5 (lower is better)
Translates to: RRLSPYLVLPGDFNDSPAGRRLL*TVTATH
Trigger: GTGTGTGGCGGTCACAGTCAACAGCAGTCTCCGACC...AGCTGGTGAATCATTGAAGTCACCTGGTAGTACCAAATAAGGGCTGAGGCGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR CAA 90 bp GACATAATCCTGAAAACCCAGTCAGGGGCTGGGTGCACTGTCAGTGAGGAGTTTGAGCAGCTGCGAACTTaGGGGCTCCTCGGAGAAACT +
Preference number: 5 (lower is better)
Translates to: DIILKTQSGAGCTVSEEFEQLRT*GLLGET
Trigger: AGTTTCTCCGAGGAGCCCCAAAGTTCGCAGCTGCTC...AAACTCCTCACTGACAGTGCACCCAGCCCCTGACTGGGTTTTCAGGATTATGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR CAA 90 bp TGCTGTATTCGTACACACAAGTATCGCAGAGGCTTTCCAAGGTCGATGCCAGGAGAATCTGCAGGAGCCTaGGCTGCCTTCCCACACTGC +
Preference number: 5 (lower is better)
Translates to: CCIRTHKYRRGFPRSMPGESAGA*AAFPHC
Trigger: GCAGTGTGGGAAGGCAGCCAAGGCTCCTGCAGATTC...TCCTGGCATCGACCTTGGAAAGCCTCTGCGATACTTGTGTGTACGAATACAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR CAA 90 bp TGCTGTATTCGTACACACAAGTATCGCAGAGGCTTTCCAAGGTCGATGCCAGGACTGACGTTCTGCCACTaGGCAGGACCTGACATTCGC +
Preference number: 5 (lower is better)
Translates to: CCIRTHKYRRGFPRSMPGLTFCH*AGPDIR
Trigger: GCGAATGTCAGGTCCTGCCAAGTGGCAGAACGTCAG...TCCTGGCATCGACCTTGGAAAGCCTCTGCGATACTTGTGTGTACGAATACAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR CAA 90 bp AGTGTCCCAAACTCCTTCACAAGAGCATGGACTGCAGGCCATGGAGACACAGAGGCCTCCCTAATTTCCTaGGCTGGTTCCAGCTTTCCA +
Preference number: 5 (lower is better)
Translates to: SVPNSFTRAWTAGHGDTEASLIS*AGSSFP
Trigger: TGGAAAGCTGGAACCAGCCAAGGAAATTAGGGAGGC...CTCTGTGTCTCCATGGCCTGCAGTCCATGCTCTTGTGAAGGAGTTTGGGACACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR CAA 90 bp CTGCCTTCCCACACTGCTGATGAACCAAGGACTGTTTCGACAGGCAGGTTGCTATCGTGGAGTCCAAATTaGGTGCGCAAGTGGGAGGAT +
Preference number: 5 (lower is better)
Translates to: LPSHTADEPRTVSTGRLLSWSPN*VRKWED
Trigger: ATCCTCCCACTTGCGCACCAAATTTGGACTCCACGA...TAGCAACCTGCCTGTCGAAACAGTCCTTGGTTCATCAGCAGTGTGGGAAGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR CAA 90 bp TATCGCAGAGGCTTTCCAAGGTCGATGCCAGGAATCTGCAGGAGCCTTGGCTGCCTTTTTGAGCTTGGTTaGAGTTTCGCAGGTGCTCTC +
Preference number: 5 (lower is better)
Translates to: YRRGFPRSMPGICRSLGCLFELG*SFAGAL
Trigger: GAGAGCACCTGCGAAACTCAAACCAAGCTCAAAAAG...GCAGCCAAGGCTCCTGCAGATTCCTGGCATCGACCTTGGAAAGCCTCTGCGATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR CAA 90 bp TATCGCAGAGGCTTTCCAAGGTCGATGCCAGGAATCTGCAGGAGCCTTGGCTGCGGATTTCTATTGTGCTaGCTTCACCCAAAGACCCCT +
Preference number: 5 (lower is better)
Translates to: YRRGFPRSMPGICRSLGCGFLLC*LHPKTP
Trigger: AGGGGTCTTTGGGTGAAGCAAGCACAATAGAAATCC...GCAGCCAAGGCTCCTGCAGATTCCTGGCATCGACCTTGGAAAGCCTCTGCGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR CAA 90 bp CTGCCTTCCCACACTGCTGATGAACCAAGGACTGTTTCGACAGGCAGGTTGCTACATGCTCTTCTCCTTTaGTGCTGCCGGATGCTCCTT +
Preference number: 5 (lower is better)
Translates to: LPSHTADEPRTVSTGRLLHALLL*CCRMLL
Trigger: AAGGAGCATCCGGCAGCACAAAAGGAGAAGAGCATG...TAGCAACCTGCCTGTCGAAACAGTCCTTGGTTCATCAGCAGTGTGGGAAGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR CAA 90 bp CTGCCTTCCCACACTGCTGATGAACCAAGGACTGTTTCGACAGGCAGGTTGCTACGCCTCAGCCCTTATTaGGTACTACCAGGTGACTTC +
Preference number: 5 (lower is better)
Translates to: LPSHTADEPRTVSTGRLLRLSPY*VLPGDF
Trigger: GAAGTCACCTGGTAGTACCAAATAAGGGCTGAGGCG...TAGCAACCTGCCTGTCGAAACAGTCCTTGGTTCATCAGCAGTGTGGGAAGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR CAA 90 bp AGTGTCCCAAACTCCTTCACAAGAGCATGGACTGCAGGCCATGGAGACACAGAGCAGGGTCTGAACATTTaGGACTCAATGCTGCACGAC +
Preference number: 5 (lower is better)
Translates to: SVPNSFTRAWTAGHGDTEQGLNI*DSMLHD
Trigger: GTCGTGCAGCATTGAGTCCAAAATGTTCAGACCCTG...CTCTGTGTCTCCATGGCCTGCAGTCCATGCTCTTGTGAAGGAGTTTGGGACACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR CAA 90 bp TATCGCAGAGGCTTTCCAAGGTCGATGCCAGGAATCTGCAGGAGCCTTGGCTGCTTGCGTCACTTGATCTaGAAGACATTCTCGTCACAG +
Preference number: 5 (lower is better)
Translates to: YRRGFPRSMPGICRSLGCLRHLI*KTFSSQ
Trigger: CTGTGACGAGAATGTCTTCAAGATCAAGTGACGCAA...GCAGCCAAGGCTCCTGCAGATTCCTGGCATCGACCTTGGAAAGCCTCTGCGATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR CAA 90 bp GACATAATCCTGAAAACCCAGTCAGGGGCTGGGTGCACTGTCAGTGAGGAGTTTTTTTGTTCGAAGAACTaGGACTCCAAGGGGCTGGGC +
Preference number: 5 (lower is better)
Translates to: DIILKTQSGAGCTVSEEFFCSKN*DSKGLG
Trigger: GCCCAGCCCCTTGGAGTCCAAGTTCTTCGAACAAAA...AAACTCCTCACTGACAGTGCACCCAGCCCCTGACTGGGTTTTCAGGATTATGTC
52% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR CAA 90 bp TATCGCAGAGGCTTTCCAAGGTCGATGCCAGGAATCTGCAGGAGCCTTGGCTGCAATCTGGGCTTGCCTTaGGGTTTAAGTTTCAGTCAC +
Preference number: 5 (lower is better)
Translates to: YRRGFPRSMPGICRSLGCNLGLP*GLSFSH
Trigger: GTGACTGAAACTTAAACCCAAAGGCAAGCCCAGATT...GCAGCCAAGGCTCCTGCAGATTCCTGGCATCGACCTTGGAAAGCCTCTGCGATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR CAA 90 bp TATCATCTCCCCCTTCTTAGTGTGGTGGGTCCCAGAGTGGACCAACCCACACTCCTTCTCAACTTGAACTaGCCTTTGTCTCCTTGCTCC +
Preference number: 5 (lower is better)
Translates to: YHLPLLSVVGPRVDQPTLLLNLN*PLSPCS
Trigger: GGAGCAAGGAGACAAAGGCAAGTTCAAGTTGAGAAG...GAGTGTGGGTTGGTCCACTCTGGGACCCACCACACTAAGAAGGGGGAGATGATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR CAA 90 bp GACATAATCCTGAAAACCCAGTCAGGGGCTGGGTGCACTGTCAGTGAGGAGTTTGAATGGGTACAGGTCTaGAAACAGTCTCTCCCCATC +
Preference number: 5 (lower is better)
Translates to: DIILKTQSGAGCTVSEEFEWVQV*KQSLPI
Trigger: GATGGGGAGAGACTGTTTCAAGACCTGTACCCATTC...AAACTCCTCACTGACAGTGCACCCAGCCCCTGACTGGGTTTTCAGGATTATGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR CAA 90 bp TTCGGCTTAAGAAACACACTCCCACCCCACATCCCGTCTTTTAAGCTTCATCTCAAGAGTTGTTTACTGTaGCAAGGGCCCGTGGGCTCC +
Preference number: 5 (lower is better)
Translates to: FGLRNTLPPHIPSFKLHLKSCLL*QGPVGS
Trigger: GGAGCCCACGGGCCCTTGCAACAGTAAACAACTCTT...GAGATGAAGCTTAAAAGACGGGATGTGGGGTGGGAGTGTGTTTCTTAAGCCGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR CAA 90 bp AGCAGTTATGCACATGGACATAATCCTGAAAACCCAGTCAGGGGCTGGGTGCACTGGGCACCAGAAGTCTaGATCCATGCTCTTCTCCTT +
Preference number: 5 (lower is better)
Translates to: SSYAHGHNPENPVRGWVHWAPEV*IHALLL
Trigger: AAGGAGAAGAGCATGGATCAAGACTTCTGGTGCCCA...GTGCACCCAGCCCCTGACTGGGTTTTCAGGATTATGTCCATGTGCATAACTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR CAA 90 bp AGGCGCCTCAGCCCTTATTTGGTACTACCAGGTGACTTCAATGATTCACCAGCTGTTTCGACAGGCAGGTaGCTAGCCCACATCAACCTT +
Preference number: 5 (lower is better)
Translates to: RRLSPYLVLPGDFNDSPAVSTGR*LAHINL
Trigger: AAGGTTGATGTGGGCTAGCAACCTGCCTGTCGAAAC...AGCTGGTGAATCATTGAAGTCACCTGGTAGTACCAAATAAGGGCTGAGGCGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR CAA 90 bp AGCAGTTATGCACATGGACATAATCCTGAAAACCCAGTCAGGGGCTGGGTGCACCAGAGCCTGCCACACTaGGGGTTCTTTCTACAAAAT +
Preference number: 5 (lower is better)
Translates to: SSYAHGHNPENPVRGWVHQSLPH*GFFLQN
Trigger: ATTTTGTAGAAAGAACCCCAAGTGTGGCAGGCTCTG...GTGCACCCAGCCCCTGACTGGGTTTTCAGGATTATGTCCATGTGCATAACTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR CAA 90 bp AGGCGCCTCAGCCCTTATTTGGTACTACCAGGTGACTTCAATGATTCACCAGCTAGATGGTCCTTTGGCTaGGTTGTAAGCCCTAGTAGG +
Preference number: 5 (lower is better)
Translates to: RRLSPYLVLPGDFNDSPARWSFG*VVSPSR
Trigger: CCTACTAGGGCTTACAACCAAGCCAAAGGACCATCT...AGCTGGTGAATCATTGAAGTCACCTGGTAGTACCAAATAAGGGCTGAGGCGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR CAA 90 bp AGTGTCCCAAACTCCTTCACAAGAGCATGGACTGCAGGCCATGGAGACACAGAGACTGAGGTCATTTGTTaGTCTGTCTTCTTCTGGTTC +
Preference number: 5 (lower is better)
Translates to: SVPNSFTRAWTAGHGDTETEVIC*SVFFWF
Trigger: GAACCAGAAGAAGACAGACAAACAAATGACCTCAGT...CTCTGTGTCTCCATGGCCTGCAGTCCATGCTCTTGTGAAGGAGTTTGGGACACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR CAA 90 bp AGTGTCCCAAACTCCTTCACAAGAGCATGGACTGCAGGCCATGGAGACACAGAGGCTAGATCTTCCACATaGAAATCTTCACCCAGAATG +
Preference number: 5 (lower is better)
Translates to: SVPNSFTRAWTAGHGDTEARSST*KSSPRM
Trigger: CATTCTGGGTGAAGATTTCAATGTGGAAGATCTAGC...CTCTGTGTCTCCATGGCCTGCAGTCCATGCTCTTGTGAAGGAGTTTGGGACACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR CAA 90 bp GACATAATCCTGAAAACCCAGTCAGGGGCTGGGTGCACTGTCAGTGAGGAGTTTGGGAAGAGGATCTTTTaGTTTCCCGCACTTATTGCT +
Preference number: 5 (lower is better)
Translates to: DIILKTQSGAGCTVSEEFGKRIF*FPALIA
Trigger: AGCAATAAGTGCGGGAAACAAAAAGATCCTCTTCCC...AAACTCCTCACTGACAGTGCACCCAGCCCCTGACTGGGTTTTCAGGATTATGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR CAA 90 bp AGGCGCCTCAGCCCTTATTTGGTACTACCAGGTGACTTCAATGATTCACCAGCTCCAGACAATCTGGGCTaGCCTTTGGGTTTAAGTTTC +
Preference number: 5 (lower is better)
Translates to: RRLSPYLVLPGDFNDSPAPDNLG*PLGLSF
Trigger: GAAACTTAAACCCAAAGGCAAGCCCAGATTGTCTGG...AGCTGGTGAATCATTGAAGTCACCTGGTAGTACCAAATAAGGGCTGAGGCGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR CAA 90 bp TGCTGTATTCGTACACACAAGTATCGCAGAGGCTTTCCAAGGTCGATGCCAGGACTTGCCTTTGTCTCCTaGCTCCGTGACAATGAATGT +
Preference number: 5 (lower is better)
Translates to: CCIRTHKYRRGFPRSMPGLAFVS*LRDNEC
Trigger: ACATTCATTGTCACGGAGCAAGGAGACAAAGGCAAG...TCCTGGCATCGACCTTGGAAAGCCTCTGCGATACTTGTGTGTACGAATACAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR CAA 90 bp TTCGGCTTAAGAAACACACTCCCACCCCACATCCCGTCTTTTAAGCTTCATCTCAAACTGCCCAAAGAGTaGTTTACTGTTGCAAGGGCC +
Preference number: 5 (lower is better)
Translates to: FGLRNTLPPHIPSFKLHLKLPKE*FTVARA
Trigger: GGCCCTTGCAACAGTAAACAACTCTTTGGGCAGTTT...GAGATGAAGCTTAAAAGACGGGATGTGGGGTGGGAGTGTGTTTCTTAAGCCGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR CAA 90 bp AGTAGTTGTTTCAACAGATCAGCTTCATCCTTTTTCTTCAGAAGCCCCAAACCGAGCTCGTCCATTCCGTaGCTAACCTCCAGGTGTCTC +
Preference number: 5 (lower is better)
Translates to: SSCFNRSASSFFFRSPKPSSSIP*LTSRCL
Trigger: GAGACACCTGGAGGTTAGCAACGGAATGGACGAGCT...CGGTTTGGGGCTTCTGAAGAAAAAGGATGAAGCTGATCTGTTGAAACAACTACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR CAA 90 bp GACATAATCCTGAAAACCCAGTCAGGGGCTGGGTGCACTGTCAGTGAGGAGTTTCATATGCTTCTCAACTaGAACTTGCCTTTGTCTCCT +
Preference number: 5 (lower is better)
Translates to: DIILKTQSGAGCTVSEEFHMLLN*NLPLSP
Trigger: AGGAGACAAAGGCAAGTTCAAGTTGAGAAGCATATG...AAACTCCTCACTGACAGTGCACCCAGCCCCTGACTGGGTTTTCAGGATTATGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR CAA 90 bp CTGCCTTCCCACACTGCTGATGAACCAAGGACTGTTTCGACAGGCAGGTTGCTAAAATCTACCAGCTACTaGAGAATACTCAATTCGCAA +
Preference number: 5 (lower is better)
Translates to: LPSHTADEPRTVSTGRLLKSTSY*RILNSQ
Trigger: TTGCGAATTGAGTATTCTCAAGTAGCTGGTAGATTT...TAGCAACCTGCCTGTCGAAACAGTCCTTGGTTCATCAGCAGTGTGGGAAGGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR CAA 90 bp AGCAGTTATGCACATGGACATAATCCTGAAAACCCAGTCAGGGGCTGGGTGCACCAGCAGAAGGCCAAATaGATTAGAAATGGATCATAC +
Preference number: 5 (lower is better)
Translates to: SSYAHGHNPENPVRGWVHQQKAK*IRNGSY
Trigger: GTATGATCCATTTCTAATCAATTTGGCCTTCTGCTG...GTGCACCCAGCCCCTGACTGGGTTTTCAGGATTATGTCCATGTGCATAACTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR CAA 90 bp TTCGGCTTAAGAAACACACTCCCACCCCACATCCCGTCTTTTAAGCTTCATCTCATAAAAGTAGCAGAGTaGTCAGTGGGTAAGGGACAG +
Preference number: 5 (lower is better)
Translates to: FGLRNTLPPHIPSFKLHLIKVAE*SVGKGQ
Trigger: CTGTCCCTTACCCACTGACAACTCTGCTACTTTTAT...GAGATGAAGCTTAAAAGACGGGATGTGGGGTGGGAGTGTGTTTCTTAAGCCGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR CAA 90 bp CTGCCTTCCCACACTGCTGATGAACCAAGGACTGTTTCGACAGGCAGGTTGCTATATACCTTCTTACGTTaGCATTTAAAGAGGGAAGAC +
Preference number: 5 (lower is better)
Translates to: LPSHTADEPRTVSTGRLLYTFLR*HLKRED
Trigger: GTCTTCCCTCTTTAAATGCAAACGTAAGAAGGTATA...TAGCAACCTGCCTGTCGAAACAGTCCTTGGTTCATCAGCAGTGTGGGAAGGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR CAA 90 bp AGCAGTTATGCACATGGACATAATCCTGAAAACCCAGTCAGGGGCTGGGTGCACTGGAGTTGCAAGGCCTaGTCTTCACTAAATTTTAGA +
Preference number: 5 (lower is better)
Translates to: SSYAHGHNPENPVRGWVHWSCKA*SSLNFR
Trigger: TCTAAAATTTAGTGAAGACAAGGCCTTGCAACTCCA...GTGCACCCAGCCCCTGACTGGGTTTTCAGGATTATGTCCATGTGCATAACTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR CAA 90 bp AGTAGTTGTTTCAACAGATCAGCTTCATCCTTTTTCTTCAGAAGCCCCAAACCGTTCTATCAGCCCCTTTaGCCTCCGAGTTGGGAAAGT +
Preference number: 5 (lower is better)
Translates to: SSCFNRSASSFFFRSPKPFYQPL*PPSWES
Trigger: ACTTTCCCAACTCGGAGGCAAAAGGGGCTGATAGAA...CGGTTTGGGGCTTCTGAAGAAAAAGGATGAAGCTGATCTGTTGAAACAACTACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR CAA 90 bp TGCTGTATTCGTACACACAAGTATCGCAGAGGCTTTCCAAGGTCGATGCCAGGAAGACTTCCCTTTGTTTaGAGAATTCAACACATGTTC +
Preference number: 5 (lower is better)
Translates to: CCIRTHKYRRGFPRSMPGRLPFV*RIQHMF
Trigger: GAACATGTGTTGAATTCTCAAAACAAAGGGAAGTCT...TCCTGGCATCGACCTTGGAAAGCCTCTGCGATACTTGTGTGTACGAATACAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR CAA 90 bp AGTAGTTGTTTCAACAGATCAGCTTCATCCTTTTTCTTCAGAAGCCCCAAACCGCCTCTGGGAAAGCTGTaGTTGGTTATAGGCTATTAT +
Preference number: 5 (lower is better)
Translates to: SSCFNRSASSFFFRSPKPPLGKL*LVIGYY
Trigger: ATAATAGCCTATAACCAACAACAGCTTTCCCAGAGG...CGGTTTGGGGCTTCTGAAGAAAAAGGATGAAGCTGATCTGTTGAAACAACTACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS-3UTR CAA 90 bp AGTAGTTGTTTCAACAGATCAGCTTCATCCTTTTTCTTCAGAAGCCCCAAACCGCTGGGAAAGCTGTTGTaGGTTATAGGCTATTATTTA +
Preference number: 5 (lower is better)
Translates to: SSCFNRSASSFFFRSPKPLGKLL*VIGYYL
Trigger: TAAATAATAGCCTATAACCAACAACAGCTTTCCCAG...CGGTTTGGGGCTTCTGAAGAAAAAGGATGAAGCTGATCTGTTGAAACAACTACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS CCA 72 bp CTGCCAGGAGACACAAGGCCTCCCGGGAGCCCGGCCTaGCCCCTTGTGGTGGCCTTCAATTCCTCGGCGTCC +
Preference number: 6 (lower is better)
Translates to: LPGDTRPPGSPA*PLVVAFNSSAS
Trigger: GGACGCCGAGGAATTGAAGGCCACCACAAGGGGCCAGGCCGGGCTCCCGGGAGGCCTTGTGTCTCCTGGCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS CAA 72 bp CGTGCTGGCTGCCTCTCACATCAGGCCACTGTCCCCTaGCCACACAGCGGTCTCTCTGGTTGGGGAGGCCAC +
Preference number: 6 (lower is better)
Translates to: RAGCLSHQATVP*PHSGLSGWGGH
Trigger: GTGGCCTCCCCAACCAGAGAGACCGCTGTGTGGCAAGGGGACAGTGGCCTGATGTGAGAGGCAGCCAGCACG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS GCA 72 bp TGGGCTTGGGCCATTCCTCTGGCCTCCAGGTTTTCGTaGTCCCTCGGCTTCTGGCTCCTGGCTTCTTGCCGT +
Preference number: 6 (lower is better)
Translates to: WAWAIPLASRFS*SLGFWLLASCR
Trigger: ACGGCAAGAAGCCAGGAGCCAGAAGCCGAGGGAGCACGAAAACCTGGAGGCCAGAGGAATGGCCCAAGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS GCA 72 bp GGGAGGAAACTTGTCTTCCAGTGTGCCCGTGCTGGCTaGCTCTCACATCAGGCCACTGTCCCCTTGCCACAC +
Preference number: 6 (lower is better)
Translates to: GRKLVFQCARAG*LSHQATVPLPH
Trigger: GTGTGGCAAGGGGACAGTGGCCTGATGTGAGAGGCAGCCAGCACGGGCACACTGGAAGACAAGTTTCCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS GCA 72 bp GCGGCTCCGCCTCACTCTCCTCACTGCTGCTGCTGCTaGTGCTGCTGCTACTGCTGCTTTCTTCCTCTTCCT +
Preference number: 6 (lower is better)
Translates to: AAPPHSPHCCCC*CCCYCCFLPLP
Trigger: AGGAAGAGGAAGAAAGCAGCAGTAGCAGCAGCAGCAGCAGCAGCAGCAGTGAGGAGAGTGAGGCGGAGCCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS GCA 72 bp GCTGCGGCTCCGCCTCACTCTCCTCACTGCTGCTGCTaGTGCTGCTGCTGCTACTGCTGCTTTCTTCCTCTT +
Preference number: 6 (lower is better)
Translates to: AAAPPHSPHCCC*CCCCYCCFLPL
Trigger: AAGAGGAAGAAAGCAGCAGTAGCAGCAGCAGCAGCAGCAGCAGCAGTGAGGAGAGTGAGGCGGAGCCGCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS CCA 72 bp TCCCTGGAGATGCTGTCCTTGGACACAGAGAGTGAGTaGCCCAATCTCTGGGCACGGTCCCCACTGCCAGGA +
Preference number: 6 (lower is better)
Translates to: SLEMLSLDTESE*PNLWARSPLPG
Trigger: TCCTGGCAGTGGGGACCGTGCCCAGAGATTGGGCCACTCACTCTCTGTGTCCAAGGACAGCATCTCCAGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS CAA 72 bp ACCGCTGGCCCCAGCCTTCTCGGTCGGAGACTGCTGTaGACTGTGACCGCCACACACATTTATGGGCACCGT +
Preference number: 6 (lower is better)
Translates to: TAGPSLLGRRLL*TVTATHIYGHR
Trigger: ACGGTGCCCATAAATGTGTGTGGCGGTCACAGTCAACAGCAGTCTCCGACCGAGAAGGCTGGGGCCAGCGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS GCA 72 bp CCGCCTCACTCTCCTCACTGCTGCTGCTGCTGCTGCTaGTGCTACTGCTGCTTTCTTCCTCTTCCTGGAGCT +
Preference number: 6 (lower is better)
Translates to: PPHSPHCCCCCC*CYCCFLPLPGA
Trigger: AGCTCCAGGAAGAGGAAGAAAGCAGCAGTAGCAGCAGCAGCAGCAGCAGCAGCAGTGAGGAGAGTGAGGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS GCA 72 bp GCTCCGCCTCACTCTCCTCACTGCTGCTGCTGCTGCTaGTGCTGCTACTGCTGCTTTCTTCCTCTTCCTGGA +
Preference number: 6 (lower is better)
Translates to: APPHSPHCCCCC*CCYCCFLPLPG
Trigger: TCCAGGAAGAGGAAGAAAGCAGCAGTAGCAGCAGCAGCAGCAGCAGCAGCAGTGAGGAGAGTGAGGCGGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS TCA 72 bp CAGGTGTCTCTTCTCTGCACTCGTGCTTCCATCTGCTaGGCAGAAAGGTGCACCGCCACCTTCTTCCACGCG +
Preference number: 6 (lower is better)
Translates to: QVSLLCTRASIC*AERCTATFFHA
Trigger: CGCGTGGAAGAAGGTGGCGGTGCACCTTTCTGCTCAGCAGATGGAAGCACGAGTGCAGAGAAGAGACACCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS TCA 72 bp TCAATTCCTCGGCGTCCTCCTGGGAGTCGGCATTCCTaGAGCTCAGGACTCTCATCCGTGACACTGAGCTCA +
Preference number: 6 (lower is better)
Translates to: SIPRRPPGSRHS*SSGLSSVTLSS
Trigger: TGAGCTCAGTGTCACGGATGAGAGTCCTGAGCTTCAGGAATGCCGACTCCCAGGAGGACGCCGAGGAATTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS GCA 72 bp TCCCAGGGACGACGGCTGACCGGTTTCAGGAGAAACTaGCCAAAGAGTTGTTTACTGTTGCAAGGGCCCGTG +
Preference number: 6 (lower is better)
Translates to: SQGRRLTGFRRN*PKSCLLLQGPV
Trigger: CACGGGCCCTTGCAACAGTAAACAACTCTTTGGGCAGTTTCTCCTGAAACCGGTCAGCCGTCGTCCCTGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS CAA 72 bp ACGGCTGACCGGTTTCAGGAGAAACTGCCCAAAGAGTaGTTTACTGTTGCAAGGGCCCGTGGGCTCCCCCTT +
Preference number: 6 (lower is better)
Translates to: TADRFQEKLPKE*FTVARARGLPL
Trigger: AAGGGGGAGCCCACGGGCCCTTGCAACAGTAAACAACTCTTTGGGCAGTTTCTCCTGAAACCGGTCAGCCGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS CCA 72 bp TCTCCTTTTGTGCTGCCGGATGCTCCTTCTCTTCCCTaGAGATGCTGTCCTTGGACACAGAGAGTGAGTGGC +
Preference number: 6 (lower is better)
Translates to: SPFVLPDAPSLP*RCCPWTQRVSG
Trigger: GCCACTCACTCTCTGTGTCCAAGGACAGCATCTCCAGGGAAGAGAAGGAGCATCCGGCAGCACAAAAGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS CAA 72 bp ACAGGAAATGGGCTACCTGCCAGCTCGTCCATTCCGTaGCTAACCTCCAGGTGTCTCTTCTCTGCACTCGTG +
Preference number: 6 (lower is better)
Translates to: TGNGLPASSSIP*LTSRCLFSALV
Trigger: CACGAGTGCAGAGAAGAGACACCTGGAGGTTAGCAACGGAATGGACGAGCTGGCAGGTAGCCCATTTCCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS CCA 72 bp ATGGGGCTGAGCAGCCACTCTTCTCAGAATTCCTCGTaGAGTCCAAATTTGGTGCGCAAGTGGGAGGATACG +
Preference number: 6 (lower is better)
Translates to: MGLSSHSSQNSS*SPNLVRKWEDT
Trigger: CGTATCCTCCCACTTGCGCACCAAATTTGGACTCCACGAGGAATTCTGAGAAGAGTGGCTGCTCAGCCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS CCA 72 bp CAGGATCCTTGCAGCCCTGGCTTGCAAGGACTCACCTaGGGGGATTTCTATTGTGCTTGCTTCACCCAAAGA +
Preference number: 6 (lower is better)
Translates to: QDPCSPGLQGLT*GDFYCACFTQR
Trigger: TCTTTGGGTGAAGCAAGCACAATAGAAATCCCCCCAGGTGAGTCCTTGCAAGCCAGGGCTGCAAGGATCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS CAA 90 bp ATTCTCGTCACAGGAAATGGGCTACCTGCCAGCTCGTCCATTCCGTaGCTAACCTCCAGGTGTCTCTTCTCTGCACTCGTGCTTCCATCT +
Preference number: 6 (lower is better)
Translates to: ILVTGNGLPASSSIP*LTSRCLFSALVLPS
Trigger: AGATGGAAGCACGAGTGCAGAGAAGAGACACCTGGAGGTTAGCAACGGAATGGACGAGCTGGCAGGTAGCCCATTTCCTGTGACGAGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS CCA 72 bp GCCACTCTTCTCAGAATTCCTCGTGGAGTCCAAATTTaGTGCGCAAGTGGGAGGATACGGTGGCATTTTAGG +
Preference number: 6 (lower is better)
Translates to: ATLLRIPRGVQI*CASGRIRWHFR
Trigger: CCTAAAATGCCACCGTATCCTCCCACTTGCGCACCAAATTTGGACTCCACGAGGAATTCTGAGAAGAGTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS GCA 72 bp TACCAGCTACTTGAGAATACTCAATTCGCAACGGAATaGAAGCTCCACCGGCATTTCATCACACCCTCTCCA +
Preference number: 6 (lower is better)
Translates to: YQLLENTQFATE*KLHRHFITPSP
Trigger: TGGAGAGGGTGTGATGAAATGCCGGTGGAGCTTGCATTCCGTTGCGAATTGAGTATTCTCAAGTAGCTGGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375377.2
CDS TCA 72 bp TCTTGCAGAGCCGGGCTCTTATCAGACCCATTCTTTTaGTCAGCACTGGGCTTTAAGTCATTGTTGTCCATA +
Preference number: 6 (lower is better)
Translates to: SCRAGLLSDPFF*SALGFKSLLSI
Trigger: TATGGACAACAATGACTTAAAGCCCAGTGCTGATCAAAAGAATGGGTCTGATAAGAGCCCGGCTCTGCAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375377.2