RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for JARID2 (Homo sapiens)

Ensembl gene IDs: ENSG00000008083

Ensembl transcript IDs: ENST00000341776.7, ENST00000397311.4, ENST00000474854.1

Found 590 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GTCCGCCTTCAGCTGCCACAACCGCCCAGAGAAACAAAACGGGGGTaGCCCGGCTTCCCAGATCACAAGCTCATCTGGCACACGGCAGAA +
Preference number: 1 (lower is better)
Translates to: VRLQLPQPPRETKRG*PGFPDHKLIWHTAE
Trigger: TTCTGCCGTGTGCCAGATGAGCTTGTGATCTGGGAAGCCGGGGCACCCCCGTTTTGTTTCTCTGGGCGGTTGTGGCAGCTGAAGGCGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
3UTR CCA 90 bp GTGCTGGTGGAGAGCCCACTCGCTCCCGTCTCCTCGTTCCACCTATaGTTAGGAAACAACGTCCGCCTTCAGCTGCCACAACCGCCCAGA +
Preference number: 1 (lower is better)
Translates to: VLVESPLAPVSSFHL*LGNNVRLQLPQPPR
Trigger: TCTGGGCGGTTGTGGCAGCTGAAGGCGGACGTTGTTTCCTAACCATAGGTGGAACGAGGAGACGGGAGCGAGTGGGCTCTCCACCAGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
3UTR GCA 90 bp TCCTCGCTCGCTTTTCTTCTTTCCTGGAACAGATGCATAGTGATGTaGTGGTGGAGAGCCCACTCGCTCCCGTCTCCTCGTTCCACCTAT +
Preference number: 1 (lower is better)
Translates to: SSLAFLLSWNRCIVM*WWRAHSLPSPRSTY
Trigger: ATAGGTGGAACGAGGAGACGGGAGCGAGTGGGCTCTCCACCAGCACATCACTATGCATCTGTTCCAGGAAAGAAGAAAAGCGAGCGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
3UTR CCA 90 bp TCGCTCGCTTTTCTTCTTTCCTGGAACAGATGCATAGTGATGTGCTaGTGGAGAGCCCACTCGCTCCCGTCTCCTCGTTCCACCTATGGT +
Preference number: 1 (lower is better)
Translates to: SLAFLLSWNRCIVMC*WRAHSLPSPRSTYG
Trigger: ACCATAGGTGGAACGAGGAGACGGGAGCGAGTGGGCTCTCCACCAGCACATCACTATGCATCTGTTCCAGGAAAGAAGAAAAGCGAGCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
3UTR GCA 90 bp TCTTTTCCGTCTTCCTCGCTCGCTTTTCTTCTTTCCTGGAACAGATaGATAGTGATGTGCTGGTGGAGAGCCCACTCGCTCCCGTCTCCT +
Preference number: 1 (lower is better)
Translates to: SFPSSSLAFLLSWNR*IVMCWWRAHSLPSP
Trigger: AGGAGACGGGAGCGAGTGGGCTCTCCACCAGCACATCACTATGCATCTGTTCCAGGAAAGAAGAAAAGCGAGCGAGGAAGACGGAAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
3UTR CCA 90 bp CATAGGACGTTCCTGGCAGTCACCACTGGCAAGCTCAGTGCAATATaGGTAGCTACGGGATTGATGAATCCAATTATGAAACAAAGAACA +
Preference number: 1 (lower is better)
Translates to: HRTFLAVTTGKLSAI*VATGLMNPIMKQRT
Trigger: TGTTCTTTGTTTCATAATTGGATTCATCAATCCCGTAGCTACCCATATTGCACTGAGCTTGCCAGTGGTGACTGCCAGGAACGTCCTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
3UTR-3UTR GCA 90 bp TTCCTGGCAGTCACCACTGGCAAGCTCAGTGCAATATGGGTAGCTACGGGATTGACGTCCGCCTTCAGCTaGCACAACCGCCCAGAGAAA +
Preference number: 2 (lower is better)
Translates to: FLAVTTGKLSAIWVATGLTSAFS*HNRPEK
Trigger: TTTCTCTGGGCGGTTGTGGCAGCTGAAGGCGGACGT...CAATCCCGTAGCTACCCATATTGCACTGAGCTTGCCAGTGGTGACTGCCAGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
3UTR-3UTR GCA 90 bp GGATTTCCTAATGAAATCAGGCACAGGTCTCCCTCATGTGACCCCTCCAAGGCAGAAACAAAACGGGGGTaGCCCGGCTTCCCAGATCAC +
Preference number: 2 (lower is better)
Translates to: GFPNEIRHRSPSCDPSKAETKRG*PGFPDH
Trigger: GTGATCTGGGAAGCCGGGGCACCCCCGTTTTGTTTC...TGCCTTGGAGGGGTCACATGAGGGAGACCTGTGCCTGATTTCATTAGGAAATCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
3UTR-3UTR GCA 90 bp GGATTTCCTAATGAAATCAGGCACAGGTCTCCCTCATGTGACCCCTCCAAGGCAACGTCCGCCTTCAGCTaGCACAACCGCCCAGAGAAA +
Preference number: 2 (lower is better)
Translates to: GFPNEIRHRSPSCDPSKATSAFS*HNRPEK
Trigger: TTTCTCTGGGCGGTTGTGGCAGCTGAAGGCGGACGT...TGCCTTGGAGGGGTCACATGAGGGAGACCTGTGCCTGATTTCATTAGGAAATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
3UTR-3UTR CCA 90 bp AAATCAGGCACAGGTCTCCCTCATGTGACCCCTCCAAGGCAGGCAGTCTTTTCCGATCACAAGCTCATCTaGCACACGGCAGAAGACGAC +
Preference number: 2 (lower is better)
Translates to: KSGTGLPHVTPPRQAVFSDHKLI*HTAEDD
Trigger: GTCGTCTTCTGCCGTGTGCCAGATGAGCTTGTGATC...GGAAAAGACTGCCTGCCTTGGAGGGGTCACATGAGGGAGACCTGTGCCTGATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
3UTR-3UTR CCA 90 bp GGATTTCCTAATGAAATCAGGCACAGGTCTCCCTCATGTGACCCCTCCAAGGCAATAGTGATGTGCTGGTaGAGAGCCCACTCGCTCCCG +
Preference number: 2 (lower is better)
Translates to: GFPNEIRHRSPSCDPSKAIVMCW*RAHSLP
Trigger: CGGGAGCGAGTGGGCTCTCCACCAGCACATCACTAT...TGCCTTGGAGGGGTCACATGAGGGAGACCTGTGCCTGATTTCATTAGGAAATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
3UTR-3UTR CCA 90 bp ACCAACAAAGTGGATCATAGGACGTTCCTGGCAGTCACCACTGGCAAGCTCAGTTGCATAGTGATGTGCTaGTGGAGAGCCCACTCGCTC +
Preference number: 2 (lower is better)
Translates to: TNKVDHRTFLAVTTGKLSCIVMC*WRAHSL
Trigger: GAGCGAGTGGGCTCTCCACCAGCACATCACTATGCA...ACTGAGCTTGCCAGTGGTGACTGCCAGGAACGTCCTATGATCCACTTTGTTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
3UTR-3UTR GCA 90 bp GGATTTCCTAATGAAATCAGGCACAGGTCTCCCTCATGTGACCCCTCCAAGGCAAGATGCATAGTGATGTaGTGGTGGAGAGCCCACTCG +
Preference number: 2 (lower is better)
Translates to: GFPNEIRHRSPSCDPSKARCIVM*WWRAHS
Trigger: CGAGTGGGCTCTCCACCAGCACATCACTATGCATCT...TGCCTTGGAGGGGTCACATGAGGGAGACCTGTGCCTGATTTCATTAGGAAATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
3UTR-3UTR CCA 90 bp TTCCTGGCAGTCACCACTGGCAAGCTCAGTGCAATATGGGTAGCTACGGGATTGTCCTCGTTCCACCTATaGTTAGGAAACAACGTCCGC +
Preference number: 2 (lower is better)
Translates to: FLAVTTGKLSAIWVATGLSSFHL*LGNNVR
Trigger: GCGGACGTTGTTTCCTAACCATAGGTGGAACGAGGA...CAATCCCGTAGCTACCCATATTGCACTGAGCTTGCCAGTGGTGACTGCCAGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
3UTR-3UTR TCA 90 bp CGCTCCCGTCTCCTCGTTCCACCTATGGTTAGGAAACAACGTCCGCCTTCAGCTGCAGTTTCCAAAATCTaGCTGCAGTATCTAGGTTTT +
Preference number: 2 (lower is better)
Translates to: RSRLLVPPMVRKQRPPSAAVSKI*LQYLGF
Trigger: AAAACCTAGATACTGCAGTCAGATTTTGGAAACTGC...AGCTGAAGGCGGACGTTGTTTCCTAACCATAGGTGGAACGAGGAGACGGGAGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
3UTR-3UTR GCA 90 bp ACCAACAAAGTGGATCATAGGACGTTCCTGGCAGTCACCACTGGCAAGCTCAGTCTTTCCTGGAACAGATaGATAGTGATGTGCTGGTGG +
Preference number: 2 (lower is better)
Translates to: TNKVDHRTFLAVTTGKLSLSWNR*IVMCWW
Trigger: CCACCAGCACATCACTATGCATCTGTTCCAGGAAAG...ACTGAGCTTGCCAGTGGTGACTGCCAGGAACGTCCTATGATCCACTTTGTTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
3UTR-3UTR CCA 90 bp AGGCAGTCTTTTCCGTCTTCCTCGCTCGCTTTTCTTCTTTCCTGGAACAGATGCTCCTCGTTCCACCTATaGTTAGGAAACAACGTCCGC +
Preference number: 2 (lower is better)
Translates to: RQSFPSSSLAFLLSWNRCSSFHL*LGNNVR
Trigger: GCGGACGTTGTTTCCTAACCATAGGTGGAACGAGGA...GCATCTGTTCCAGGAAAGAAGAAAAGCGAGCGAGGAAGACGGAAAAGACTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
3UTR-3UTR GCA 90 bp TTCCTGGCAGTCACCACTGGCAAGCTCAGTGCAATATGGGTAGCTACGGGATTGACATTCAAAAATAACTaGAGGCCTCCTAGTGGCTCT +
Preference number: 2 (lower is better)
Translates to: FLAVTTGKLSAIWVATGLTFKNN*RPPSGS
Trigger: AGAGCCACTAGGAGGCCTGCAGTTATTTTTGAATGT...CAATCCCGTAGCTACCCATATTGCACTGAGCTTGCCAGTGGTGACTGCCAGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
3UTR-3UTR TCA 90 bp AGGCAGTCTTTTCCGTCTTCCTCGCTCGCTTTTCTTCTTTCCTGGAACAGATGCAGTGCAAAGACAGCTTaGATCCTACAGCAAGTACTC +
Preference number: 2 (lower is better)
Translates to: RQSFPSSSLAFLLSWNRCSAKTA*ILQQVL
Trigger: GAGTACTTGCTGTAGGATTCAAGCTGTCTTTGCACT...GCATCTGTTCCAGGAAAGAAGAAAAGCGAGCGAGGAAGACGGAAAAGACTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
3UTR-3UTR TCA 90 bp ACCAACAAAGTGGATCATAGGACGTTCCTGGCAGTCACCACTGGCAAGCTCAGTGGGTTTTTAAAACAGTaGCTATACGGCAGTTTCCAA +
Preference number: 2 (lower is better)
Translates to: TNKVDHRTFLAVTTGKLSGFLKQ*LYGSFQ
Trigger: TTGGAAACTGCCGTATAGTCACTGTTTTAAAAACCC...ACTGAGCTTGCCAGTGGTGACTGCCAGGAACGTCCTATGATCCACTTTGTTGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
3UTR-3UTR GCA 90 bp GCCATAGAAACCGGACAACCACATTGGAAAACACTTGACTGTTTCTGTAATTGTCACTGGCAAGCTCAGTaGAATATGGGTAGCTACGGG +
Preference number: 2 (lower is better)
Translates to: AIETGQPHWKTLDCFCNCHWQAQ*NMGSYG
Trigger: CCCGTAGCTACCCATATTGCACTGAGCTTGCCAGTG...ACAATTACAGAAACAGTCAAGTGTTTTCCAATGTGGTTGTCCGGTTTCTATGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
3UTR-3UTR CCA 90 bp GCTCAGTGCAATATGGGTAGCTACGGGATTGATGAATCCAATTATGAAACAAAGGATCACAAGCTCATCTaGCACACGGCAGAAGACGAC +
Preference number: 2 (lower is better)
Translates to: AQCNMGSYGIDESNYETKDHKLI*HTAEDD
Trigger: GTCGTCTTCTGCCGTGTGCCAGATGAGCTTGTGATC...CTTTGTTTCATAATTGGATTCATCAATCCCGTAGCTACCCATATTGCACTGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
3UTR CAA 90 bp GCAGTCACCACTGGCAAGCTCAGTGCAATATGGGTAGCTACGGGATaGATGAATCCAATTATGAAACAAAGAACAGCTTGTGAAAACAGT +
Preference number: 2 (lower is better)
Translates to: AVTTGKLSAIWVATG*MNPIMKQRTACENS
Trigger: ACTGTTTTCACAAGCTGTTCTTTGTTTCATAATTGGATTCATCAATCCCGTAGCTACCCATATTGCACTGAGCTTGCCAGTGGTGACTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
3UTR-3UTR TCA 90 bp GCCATAGAAACCGGACAACCACATTGGAAAACACTTGACTGTTTCTGTAATTGTAAGATTGCACGTCGATaGCAAAGAAGCACTTACGGC +
Preference number: 2 (lower is better)
Translates to: AIETGQPHWKTLDCFCNCKIARR*QRSTYG
Trigger: GCCGTAAGTGCTTCTTTGTCATCGACGTGCAATCTT...ACAATTACAGAAACAGTCAAGTGTTTTCCAATGTGGTTGTCCGGTTTCTATGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
3UTR-3UTR CCA 90 bp TTGTTAAATATTCCAAAACAGTTCAGTCTTCTGCAACAACAACCAACAAAGTGGTGCATAGTGATGTGCTaGTGGAGAGCCCACTCGCTC +
Preference number: 2 (lower is better)
Translates to: LLNIPKQFSLLQQQPTKWCIVMC*WRAHSL
Trigger: GAGCGAGTGGGCTCTCCACCAGCACATCACTATGCA...CCACTTTGTTGGTTGTTGTTGCAGAAGACTGAACTGTTTTGGAATATTTAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
3UTR-3UTR TCA 90 bp GCTCAGTGCAATATGGGTAGCTACGGGATTGATGAATCCAATTATGAAACAAAGAGTGCAAAGACAGCTTaGATCCTACAGCAAGTACTC +
Preference number: 2 (lower is better)
Translates to: AQCNMGSYGIDESNYETKSAKTA*ILQQVL
Trigger: GAGTACTTGCTGTAGGATTCAAGCTGTCTTTGCACT...CTTTGTTTCATAATTGGATTCATCAATCCCGTAGCTACCCATATTGCACTGAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
3UTR-3UTR GCA 90 bp TTGTTAAATATTCCAAAACAGTTCAGTCTTCTGCAACAACAACCAACAAAGTGGAGATGCATAGTGATGTaGTGGTGGAGAGCCCACTCG +
Preference number: 2 (lower is better)
Translates to: LLNIPKQFSLLQQQPTKWRCIVM*WWRAHS
Trigger: CGAGTGGGCTCTCCACCAGCACATCACTATGCATCT...CCACTTTGTTGGTTGTTGTTGCAGAAGACTGAACTGTTTTGGAATATTTAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
3UTR-3UTR TCA 90 bp TGGCAAGCTCAGTGCAATATGGGTAGCTACGGGATTGATGAATCCAATTATGAAGCAGTTTCCAAAATCTaGCTGCAGTATCTAGGTTTT +
Preference number: 2 (lower is better)
Translates to: WQAQCNMGSYGIDESNYEAVSKI*LQYLGF
Trigger: AAAACCTAGATACTGCAGTCAGATTTTGGAAACTGC...TTCATAATTGGATTCATCAATCCCGTAGCTACCCATATTGCACTGAGCTTGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
3UTR-3UTR TCA 90 bp GCTCAGTGCAATATGGGTAGCTACGGGATTGATGAATCCAATTATGAAACAAAGTCAAACAAGAAGCGGTaGGATGGAGATGGAATGTTA +
Preference number: 2 (lower is better)
Translates to: AQCNMGSYGIDESNYETKSNKKR*DGDGML
Trigger: TAACATTCCATCTCCATCTCACCGCTTCTTGTTTGA...CTTTGTTTCATAATTGGATTCATCAATCCCGTAGCTACCCATATTGCACTGAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
3UTR-3UTR TCA 90 bp GCCATAGAAACCGGACAACCACATTGGAAAACACTTGACTGTTTCTGTAATTGTATTAATGCTGACTTGTaGAGGTGTCAAACAAGAAGC +
Preference number: 2 (lower is better)
Translates to: AIETGQPHWKTLDCFCNCINADL*RCQTRS
Trigger: GCTTCTTGTTTGACACCTTCACAAGTCAGCATTAAT...ACAATTACAGAAACAGTCAAGTGTTTTCCAATGTGGTTGTCCGGTTTCTATGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
3UTR-3UTR GCA 90 bp TTGTTAAATATTCCAAAACAGTTCAGTCTTCTGCAACAACAACCAACAAAGTGGACATTCAAAAATAACTaGAGGCCTCCTAGTGGCTCT +
Preference number: 2 (lower is better)
Translates to: LLNIPKQFSLLQQQPTKWTFKNN*RPPSGS
Trigger: AGAGCCACTAGGAGGCCTGCAGTTATTTTTGAATGT...CCACTTTGTTGGTTGTTGTTGCAGAAGACTGAACTGTTTTGGAATATTTAACAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
3UTR CCA 72 bp CGGGGGTGCCCCGGCTTCCCAGATCACAAGCTCATCTaGCACACGGCAGAAGACGACAGCCAAAGCAAAGCC +
Preference number: 3 (lower is better)
Translates to: RGCPGFPDHKLI*HTAEDDSQSKA
Trigger: GGCTTTGCTTTGGCTGTCGTCTTCTGCCGTGTGCCAGATGAGCTTGTGATCTGGGAAGCCGGGGCACCCCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
3UTR GCA 72 bp CAGCTGCCACAACCGCCCAGAGAAACAAAACGGGGGTaGCCCGGCTTCCCAGATCACAAGCTCATCTGGCAC +
Preference number: 3 (lower is better)
Translates to: QLPQPPRETKRG*PGFPDHKLIWH
Trigger: GTGCCAGATGAGCTTGTGATCTGGGAAGCCGGGGCACCCCCGTTTTGTTTCTCTGGGCGGTTGTGGCAGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
3UTR CCA 72 bp GAGAGCCCACTCGCTCCCGTCTCCTCGTTCCACCTATaGTTAGGAAACAACGTCCGCCTTCAGCTGCCACAA +
Preference number: 3 (lower is better)
Translates to: ESPLAPVSSFHL*LGNNVRLQLPQ
Trigger: TTGTGGCAGCTGAAGGCGGACGTTGTTTCCTAACCATAGGTGGAACGAGGAGACGGGAGCGAGTGGGCTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
3UTR CCA 72 bp CTTCTTTCCTGGAACAGATGCATAGTGATGTGCTGGTaGAGAGCCCACTCGCTCCCGTCTCCTCGTTCCACC +
Preference number: 3 (lower is better)
Translates to: LLSWNRCIVMCW*RAHSLPSPRST
Trigger: GGTGGAACGAGGAGACGGGAGCGAGTGGGCTCTCCACCAGCACATCACTATGCATCTGTTCCAGGAAAGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
3UTR GCA 72 bp GCTTTTCTTCTTTCCTGGAACAGATGCATAGTGATGTaGTGGTGGAGAGCCCACTCGCTCCCGTCTCCTCGT +
Preference number: 3 (lower is better)
Translates to: AFLLSWNRCIVM*WWRAHSLPSPR
Trigger: ACGAGGAGACGGGAGCGAGTGGGCTCTCCACCAGCACATCACTATGCATCTGTTCCAGGAAAGAAGAAAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
3UTR CCA 72 bp TTTCTTCTTTCCTGGAACAGATGCATAGTGATGTGCTaGTGGAGAGCCCACTCGCTCCCGTCTCCTCGTTCC +
Preference number: 3 (lower is better)
Translates to: FLLSWNRCIVMC*WRAHSLPSPRS
Trigger: GGAACGAGGAGACGGGAGCGAGTGGGCTCTCCACCAGCACATCACTATGCATCTGTTCCAGGAAAGAAGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
3UTR CCA 72 bp CAACAACAACCAACAAAGTGGATCATAGGACGTTCCTaGCAGTCACCACTGGCAAGCTCAGTGCAATATGGG +
Preference number: 3 (lower is better)
Translates to: QQQPTKWIIGRS*QSPLASSVQYG
Trigger: CCCATATTGCACTGAGCTTGCCAGTGGTGACTGCCAGGAACGTCCTATGATCCACTTTGTTGGTTGTTGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
3UTR CCA 72 bp TTCCTGGCAGTCACCACTGGCAAGCTCAGTGCAATATaGGTAGCTACGGGATTGATGAATCCAATTATGAAA +
Preference number: 3 (lower is better)
Translates to: FLAVTTGKLSAI*VATGLMNPIMK
Trigger: TTTCATAATTGGATTCATCAATCCCGTAGCTACCCATATTGCACTGAGCTTGCCAGTGGTGACTGCCAGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
3UTR-3UTR CAA 90 bp GCTCAGTGCAATATGGGTAGCTACGGGATTGATGAATCCAATTATGAAACAAAGGGAATGTTAGAAAGATaGCACGTCGATGACAAAGAA +
Preference number: 3 (lower is better)
Translates to: AQCNMGSYGIDESNYETKGMLER*HVDDKE
Trigger: TTCTTTGTCATCGACGTGCAATCTTTCTAACATTCC...CTTTGTTTCATAATTGGATTCATCAATCCCGTAGCTACCCATATTGCACTGAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
3UTR-3UTR CAA 90 bp GCCATAGAAACCGGACAACCACATTGGAAAACACTTGACTGTTTCTGTAATTGTTGGGTAGCTACGGGATaGATGAATCCAATTATGAAA +
Preference number: 3 (lower is better)
Translates to: AIETGQPHWKTLDCFCNCWVATG*MNPIMK
Trigger: TTTCATAATTGGATTCATCAATCCCGTAGCTACCCA...ACAATTACAGAAACAGTCAAGTGTTTTCCAATGTGGTTGTCCGGTTTCTATGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CCA 90 bp CGGCTTCCCAGATCACAAGCTCATCTGGCACACGGCAGAAGACGACAGCCAAAGCGGGGATCTCGTCCATaGCCGCCCACCCGGCCTTGC +
Preference number: 4 (lower is better)
Translates to: RLPRSQAHLAHGRRRQPKRGSRP*PPTRPC
Trigger: GCAAGGCCGGGTGGGCGGCCATGGACGAGATCCCCG...CTTTGGCTGTCGTCTTCTGCCGTGTGCCAGATGAGCTTGTGATCTGGGAAGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR TCA 90 bp CGCTCCCGTCTCCTCGTTCCACCTATGGTTAGGAAACAACGTCCGCCTTCAGCTTGCGGGGTGGTTAGCTaGAGCCTGCTCCCGGCGGCT +
Preference number: 4 (lower is better)
Translates to: RSRLLVPPMVRKQRPPSACGVVS*SLLPAA
Trigger: AGCCGCCGGGAGCAGGCTTCAGCTAACCACCCCGCA...AGCTGAAGGCGGACGTTGTTTCCTAACCATAGGTGGAACGAGGAGACGGGAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CCA 90 bp TTCCTGGCAGTCACCACTGGCAAGCTCAGTGCAATATGGGTAGCTACGGGATTGTGGCCGAGGAACCCGTaGAGGGGGCCGCTGCGGGGT +
Preference number: 4 (lower is better)
Translates to: FLAVTTGKLSAIWVATGLWPRNP*RGPLRG
Trigger: ACCCCGCAGCGGCCCCCTCCACGGGTTCCTCGGCCA...CAATCCCGTAGCTACCCATATTGCACTGAGCTTGCCAGTGGTGACTGCCAGGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR TCA 90 bp CGCTCCCGTCTCCTCGTTCCACCTATGGTTAGGAAACAACGTCCGCCTTCAGCTCCTGGCCCACCTCCTTaGGCTTGCTGCGGAAGCCGT +
Preference number: 4 (lower is better)
Translates to: RSRLLVPPMVRKQRPPSAPGPPP*ACCGSR
Trigger: ACGGCTTCCGCAGCAAGCTCAAGGAGGTGGGCCAGG...AGCTGAAGGCGGACGTTGTTTCCTAACCATAGGTGGAACGAGGAGACGGGAGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR TCA 90 bp CGCTCCCGTCTCCTCGTTCCACCTATGGTTAGGAAACAACGTCCGCCTTCAGCTGGCACAGCACCGAGGTaGCGCAGGATGGACCCTGTG +
Preference number: 4 (lower is better)
Translates to: RSRLLVPPMVRKQRPPSAGTAPR*RRMDPV
Trigger: CACAGGGTCCATCCTGCGTCACCTCGGTGCTGTGCC...AGCTGAAGGCGGACGTTGTTTCCTAACCATAGGTGGAACGAGGAGACGGGAGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR GCA 90 bp CGCTCCCGTCTCCTCGTTCCACCTATGGTTAGGAAACAACGTCCGCCTTCAGCTTTCTCCAGCCGCCGGTaGTCCTCTGGGGACAGGGAG +
Preference number: 4 (lower is better)
Translates to: RSRLLVPPMVRKQRPPSAFSSRR*SSGDRE
Trigger: CTCCCTGTCCCCAGAGGAGCACCGGCGGCTGGAGAA...AGCTGAAGGCGGACGTTGTTTCCTAACCATAGGTGGAACGAGGAGACGGGAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR GCA 90 bp CGGCTTCCCAGATCACAAGCTCATCTGGCACACGGCAGAAGACGACAGCCAAAGCCAGCCTCGAACAGCTaGCTGCGCTGCCGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: RLPRSQAHLAHGRRRQPKPASNS*LRCRSS
Trigger: AGAGCTGCGGCAGCGCAGGCAGCTGTTCGAGGCTGG...CTTTGGCTGTCGTCTTCTGCCGTGTGCCAGATGAGCTTGTGATCTGGGAAGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR GCA 90 bp CGGCTTCCCAGATCACAAGCTCATCTGGCACACGGCAGAAGACGACAGCCAAAGCCGCCACCGTGCTGCTaGCATCGTGGCTGCCATAGC +
Preference number: 4 (lower is better)
Translates to: RLPRSQAHLAHGRRRQPKPPPCC*HRGCHS
Trigger: GCTATGGCAGCCACGATGGCAGCAGCACGGTGGCGG...CTTTGGCTGTCGTCTTCTGCCGTGTGCCAGATGAGCTTGTGATCTGGGAAGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR GCA 90 bp AAATCAGGCACAGGTCTCCCTCATGTGACCCCTCCAAGGCAGGCAGTCTTTTCCTCCCGTCCGCCACCGTaGTGCTGCCATCGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: KSGTGLPHVTPPRQAVFSSRPPP*CCHRGC
Trigger: GCAGCCACGATGGCAGCAGCACGGTGGCGGACGGGA...GGAAAAGACTGCCTGCCTTGGAGGGGTCACATGAGGGAGACCTGTGCCTGATTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CCA 90 bp GGATTTCCTAATGAAATCAGGCACAGGTCTCCCTCATGTGACCCCTCCAAGGCATGGCCGAGGAACCCGTaGAGGGGGCCGCTGCGGGGT +
Preference number: 4 (lower is better)
Translates to: GFPNEIRHRSPSCDPSKAWPRNP*RGPLRG
Trigger: ACCCCGCAGCGGCCCCCTCCACGGGTTCCTCGGCCA...TGCCTTGGAGGGGTCACATGAGGGAGACCTGTGCCTGATTTCATTAGGAAATCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CCA 90 bp CGGCTTCCCAGATCACAAGCTCATCTGGCACACGGCAGAAGACGACAGCCAAAGTGGCAGCAAGCCCCTTaGCCGAGGAACCCGTGGAGG +
Preference number: 4 (lower is better)
Translates to: RLPRSQAHLAHGRRRQPKWQQAP*PRNPWR
Trigger: CCTCCACGGGTTCCTCGGCCAAGGGGCTTGCTGCCA...CTTTGGCTGTCGTCTTCTGCCGTGTGCCAGATGAGCTTGTGATCTGGGAAGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR TCA 90 bp CCTGGCAGTCACCACTGGCAAGCTCAGTGCAATATGGGTAGCTACGGGATTGATTGCGGGGTGGTTAGCTaGAGCCTGCTCCCGGCGGCT +
Preference number: 4 (lower is better)
Translates to: PGSHHWQAQCNMGSYGIDCGVVS*SLLPAA
Trigger: AGCCGCCGGGAGCAGGCTTCAGCTAACCACCCCGCA...ATCAATCCCGTAGCTACCCATATTGCACTGAGCTTGCCAGTGGTGACTGCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR TCA 90 bp CGCTCCCGTCTCCTCGTTCCACCTATGGTTAGGAAACAACGTCCGCCTTCAGCTACCGCATCTCATCGTTaGGCTTGCACTCGGGCCGCC +
Preference number: 4 (lower is better)
Translates to: RSRLLVPPMVRKQRPPSATASHR*ACTRAA
Trigger: GGCGGCCCGAGTGCAAGCTCAACGATGAGATGCGGT...AGCTGAAGGCGGACGTTGTTTCCTAACCATAGGTGGAACGAGGAGACGGGAGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR GCA 90 bp CCTGGCAGTCACCACTGGCAAGCTCAGTGCAATATGGGTAGCTACGGGATTGATCTTGTCTGCCTGGCGTaGTCTTCCCGGCCGTGGCCC +
Preference number: 4 (lower is better)
Translates to: PGSHHWQAQCNMGSYGIDLVCLA*SSRPWP
Trigger: GGGCCACGGCCGGGAAGAGCACGCCAGGCAGACAAG...ATCAATCCCGTAGCTACCCATATTGCACTGAGCTTGCCAGTGGTGACTGCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR GCA 90 bp AAATCAGGCACAGGTCTCCCTCATGTGACCCCTCCAAGGCAGGCAGTCTTTTCCGCCTTGCCCGAGTCCTaGGGCTTGTGCACGGACTCC +
Preference number: 4 (lower is better)
Translates to: KSGTGLPHVTPPRQAVFSALPES*GLCTDS
Trigger: GGAGTCCGTGCACAAGCCGCAGGACTCGGGCAAGGC...GGAAAAGACTGCCTGCCTTGGAGGGGTCACATGAGGGAGACCTGTGCCTGATTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CCA 90 bp CAGATCACAAGCTCATCTGGCACACGGCAGAAGACGACAGCCAAAGCAAAGCCAGGGGCCGCTGCGGGGTaGTTAGCTGAAGCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: QITSSSGTRQKTTAKAKPGAAAG*LAEACS
Trigger: GGAGCAGGCTTCAGCTAACCACCCCGCAGCGGCCCC...TGGCTTTGCTTTGGCTGTCGTCTTCTGCCGTGTGCCAGATGAGCTTGTGATCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CCA 90 bp TTCCTGGCAGTCACCACTGGCAAGCTCAGTGCAATATGGGTAGCTACGGGATTGGGGGGTGGTGATGGGTaGCAGCAAGCCCCTTGGCCG +
Preference number: 4 (lower is better)
Translates to: FLAVTTGKLSAIWVATGLGGGDG*QQAPWP
Trigger: CGGCCAAGGGGCTTGCTGCCACCCATCACCACCCCC...CAATCCCGTAGCTACCCATATTGCACTGAGCTTGCCAGTGGTGACTGCCAGGAA
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CCA 90 bp CCTGGCAGTCACCACTGGCAAGCTCAGTGCAATATGGGTAGCTACGGGATTGATTGCTCTTCCCGGCCGTaGCCCGCTTCGGCCGATTCC +
Preference number: 4 (lower is better)
Translates to: PGSHHWQAQCNMGSYGIDCSSRP*PASADS
Trigger: GGAATCGGCCGAAGCGGGCCACGGCCGGGAAGAGCA...ATCAATCCCGTAGCTACCCATATTGCACTGAGCTTGCCAGTGGTGACTGCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CCA 90 bp CGGCTTCCCAGATCACAAGCTCATCTGGCACACGGCAGAAGACGACAGCCAAAGCGGCCAGTCTTCAACTaGGCCTGGCCCACCTCCTTG +
Preference number: 4 (lower is better)
Translates to: RLPRSQAHLAHGRRRQPKRPVFN*AWPTSL
Trigger: CAAGGAGGTGGGCCAGGCCCAGTTGAAGACTGGCCG...CTTTGGCTGTCGTCTTCTGCCGTGTGCCAGATGAGCTTGTGATCTGGGAAGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR TCA 90 bp CGGCTTCCCAGATCACAAGCTCATCTGGCACACGGCAGAAGACGACAGCCAAAGCGGCTGTCAGCCCGGTaGTCGCTGTGCTTCTCCTTT +
Preference number: 4 (lower is better)
Translates to: RLPRSQAHLAHGRRRQPKRLSAR*SLCFSF
Trigger: AAAGGAGAAGCACAGCGATCACCGGGCTGACAGCCG...CTTTGGCTGTCGTCTTCTGCCGTGTGCCAGATGAGCTTGTGATCTGGGAAGCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR TCA 90 bp CAGATCACAAGCTCATCTGGCACACGGCAGAAGACGACAGCCAAAGCAAAGCCAGGGCCACGCCGTGGATaGGCCCATTCTTGGGCTCGA +
Preference number: 4 (lower is better)
Translates to: QITSSSGTRQKTTAKAKPGPRRG*AHSWAR
Trigger: TCGAGCCCAAGAATGGGCTCATCCACGGCGTGGCCC...TGGCTTTGCTTTGGCTGTCGTCTTCTGCCGTGTGCCAGATGAGCTTGTGATCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR GCA 90 bp CGCTCCCGTCTCCTCGTTCCACCTATGGTTAGGAAACAACGTCCGCCTTCAGCTCCTCGAACAGCTGCCTaGGCTGCCGCAGCTCTGTAT +
Preference number: 4 (lower is better)
Translates to: RSRLLVPPMVRKQRPPSAPRTAA*AAAALY
Trigger: ATACAGAGCTGCGGCAGCGCAGGCAGCTGTTCGAGG...AGCTGAAGGCGGACGTTGTTTCCTAACCATAGGTGGAACGAGGAGACGGGAGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR GCA 90 bp TTCCTGGCAGTCACCACTGGCAAGCTCAGTGCAATATGGGTAGCTACGGGATTGCCGCCACCGTGCTGCTaGCATCGTGGCTGCCATAGC +
Preference number: 4 (lower is better)
Translates to: FLAVTTGKLSAIWVATGLPPPCC*HRGCHS
Trigger: GCTATGGCAGCCACGATGGCAGCAGCACGGTGGCGG...CAATCCCGTAGCTACCCATATTGCACTGAGCTTGCCAGTGGTGACTGCCAGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR GCA 90 bp CCTGGCAGTCACCACTGGCAAGCTCAGTGCAATATGGGTAGCTACGGGATTGATCGTCCGCCACCGTGCTaGTGCCATCGTGGCTGCCAT +
Preference number: 4 (lower is better)
Translates to: PGSHHWQAQCNMGSYGIDRPPPC*CHRGCH
Trigger: ATGGCAGCCACGATGGCAGCAGCACGGTGGCGGACG...ATCAATCCCGTAGCTACCCATATTGCACTGAGCTTGCCAGTGGTGACTGCCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR GCA 90 bp GGATTTCCTAATGAAATCAGGCACAGGTCTCCCTCATGTGACCCCTCCAAGGCATCCCGTCCGCCACCGTaGTGCTGCCATCGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: GFPNEIRHRSPSCDPSKASRPPP*CCHRGC
Trigger: GCAGCCACGATGGCAGCAGCACGGTGGCGGACGGGA...TGCCTTGGAGGGGTCACATGAGGGAGACCTGTGCCTGATTTCATTAGGAAATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CCA 90 bp ACCAACAAAGTGGATCATAGGACGTTCCTGGCAGTCACCACTGGCAAGCTCAGTGGGGGTGGTGATGGGTaGCAGCAAGCCCCTTGGCCG +
Preference number: 4 (lower is better)
Translates to: TNKVDHRTFLAVTTGKLSGGGDG*QQAPWP
Trigger: CGGCCAAGGGGCTTGCTGCCACCCATCACCACCCCC...ACTGAGCTTGCCAGTGGTGACTGCCAGGAACGTCCTATGATCCACTTTGTTGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CCA 90 bp CAGATCACAAGCTCATCTGGCACACGGCAGAAGACGACAGCCAAAGCAAAGCCATTGGCCAGCCGGTCCTaGGCAGTTCTGGGGATGCGC +
Preference number: 4 (lower is better)
Translates to: QITSSSGTRQKTTAKAKPLASRS*AVLGMR
Trigger: GCGCATCCCCAGAACTGCCCAGGACCGGCTGGCCAA...TGGCTTTGCTTTGGCTGTCGTCTTCTGCCGTGTGCCAGATGAGCTTGTGATCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR TCA 90 bp CAAGCTCATCTGGCACACGGCAGAAGACGACAGCCAAAGCAAAGCCATTTCAAGGCTCACAGCCCCCTATaGGCGGGAGCTCGTCCATGG +
Preference number: 4 (lower is better)
Translates to: QAHLAHGRRRQPKQSHFKAHSPL*AGARPW
Trigger: CCATGGACGAGCTCCCGCTCATAGGGGGCTGTGAGC...CTTGAAATGGCTTTGCTTTGGCTGTCGTCTTCTGCCGTGTGCCAGATGAGCTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR TCA 90 bp CAAGCTCATCTGGCACACGGCAGAAGACGACAGCCAAAGCAAAGCCATTTCAAGCCTGGCCCACCTCCTTaGGCTTGCTGCGGAAGCCGT +
Preference number: 4 (lower is better)
Translates to: QAHLAHGRRRQPKQSHFKPGPPP*ACCGSR
Trigger: ACGGCTTCCGCAGCAAGCTCAAGGAGGTGGGCCAGG...CTTGAAATGGCTTTGCTTTGGCTGTCGTCTTCTGCCGTGTGCCAGATGAGCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR GCA 90 bp AGGCAGTCTTTTCCGTCTTCCTCGCTCGCTTTTCTTCTTTCCTGGAACAGATGCCTTGTCTGCCTGGCGTaGTCTTCCCGGCCGTGGCCC +
Preference number: 4 (lower is better)
Translates to: RQSFPSSSLAFLLSWNRCLVCLA*SSRPWP
Trigger: GGGCCACGGCCGGGAAGAGCACGCCAGGCAGACAAG...GCATCTGTTCCAGGAAAGAAGAAAAGCGAGCGAGGAAGACGGAAAAGACTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR GCA 90 bp AAATCAGGCACAGGTCTCCCTCATGTGACCCCTCCAAGGCAGGCAGTCTTTTCCAGGCGCTGTCCGCCTTaGCATGTGCTTGTCTGCCTG +
Preference number: 4 (lower is better)
Translates to: KSGTGLPHVTPPRQAVFSRRCPP*HVLVCL
Trigger: CAGGCAGACAAGCACATGGCAAGGCGGACAGCGCCT...GGAAAAGACTGCCTGCCTTGGAGGGGTCACATGAGGGAGACCTGTGCCTGATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR GCA 90 bp CCTGGCAGTCACCACTGGCAAGCTCAGTGCAATATGGGTAGCTACGGGATTGATGAGTCCTGCGGCTTGTaGACGGACTCCGGTTGCGAG +
Preference number: 4 (lower is better)
Translates to: PGSHHWQAQCNMGSYGIDESCGL*TDSGCE
Trigger: CTCGCAACCGGAGTCCGTGCACAAGCCGCAGGACTC...ATCAATCCCGTAGCTACCCATATTGCACTGAGCTTGCCAGTGGTGACTGCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR GCA 90 bp ACCAACAAAGTGGATCATAGGACGTTCCTGGCAGTCACCACTGGCAAGCTCAGTGCCTTGCCCGAGTCCTaGGGCTTGTGCACGGACTCC +
Preference number: 4 (lower is better)
Translates to: TNKVDHRTFLAVTTGKLSALPES*GLCTDS
Trigger: GGAGTCCGTGCACAAGCCGCAGGACTCGGGCAAGGC...ACTGAGCTTGCCAGTGGTGACTGCCAGGAACGTCCTATGATCCACTTTGTTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR GCA 90 bp ACCAACAAAGTGGATCATAGGACGTTCCTGGCAGTCACCACTGGCAAGCTCAGTCGCCCTTCTCGGCCTTaGCCGAGTCCTGCGGCTTGT +
Preference number: 4 (lower is better)
Translates to: TNKVDHRTFLAVTTGKLSRPSRP*PSPAAC
Trigger: ACAAGCCGCAGGACTCGGGCAAGGCCGAGAAGGGCG...ACTGAGCTTGCCAGTGGTGACTGCCAGGAACGTCCTATGATCCACTTTGTTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR GCA 90 bp GGATTTCCTAATGAAATCAGGCACAGGTCTCCCTCATGTGACCCCTCCAAGGCATTCTCCAGCCGCCGGTaGTCCTCTGGGGACAGGGAG +
Preference number: 4 (lower is better)
Translates to: GFPNEIRHRSPSCDPSKAFSSRR*SSGDRE
Trigger: CTCCCTGTCCCCAGAGGAGCACCGGCGGCTGGAGAA...TGCCTTGGAGGGGTCACATGAGGGAGACCTGTGCCTGATTTCATTAGGAAATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR GCA 90 bp AAATCAGGCACAGGTCTCCCTCATGTGACCCCTCCAAGGCAGGCAGTCTTTTCCGGGGTGCCATTGGCTTaGAGCAGGGTGTGGACCACA +
Preference number: 4 (lower is better)
Translates to: KSGTGLPHVTPPRQAVFSGVPLA*SRVWTT
Trigger: TGTGGTCCACACCCTGCTGCAAGCCAATGGCACCCC...GGAAAAGACTGCCTGCCTTGGAGGGGTCACATGAGGGAGACCTGTGCCTGATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR GCA 90 bp CGGCTTCCCAGATCACAAGCTCATCTGGCACACGGCAGAAGACGACAGCCAAAGAACTGGCCACTCTGCTaGACGGTCCTGTGCACCTTG +
Preference number: 4 (lower is better)
Translates to: RLPRSQAHLAHGRRRQPKNWPLC*TVLCTL
Trigger: CAAGGTGCACAGGACCGTGCAGCAGAGTGGCCAGTT...CTTTGGCTGTCGTCTTCTGCCGTGTGCCAGATGAGCTTGTGATCTGGGAAGCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR GCA 90 bp CGGCTTCCCAGATCACAAGCTCATCTGGCACACGGCAGAAGACGACAGCCAAAGACAAACTGGCCACTCTaGTGCACGGTCCTGTGCACC +
Preference number: 4 (lower is better)
Translates to: RLPRSQAHLAHGRRRQPKTNWPL*CTVLCT
Trigger: GGTGCACAGGACCGTGCAGCAGAGTGGCCAGTTTGT...CTTTGGCTGTCGTCTTCTGCCGTGTGCCAGATGAGCTTGTGATCTGGGAAGCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR GCA 90 bp CGCTCCCGTCTCCTCGTTCCACCTATGGTTAGGAAACAACGTCCGCCTTCAGCTACAAACTGGCCACTCTaGTGCACGGTCCTGTGCACC +
Preference number: 4 (lower is better)
Translates to: RSRLLVPPMVRKQRPPSATNWPL*CTVLCT
Trigger: GGTGCACAGGACCGTGCAGCAGAGTGGCCAGTTTGT...AGCTGAAGGCGGACGTTGTTTCCTAACCATAGGTGGAACGAGGAGACGGGAGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CCA 90 bp CGCTCCCGTCTCCTCGTTCCACCTATGGTTAGGAAACAACGTCCGCCTTCAGCTCCCCTTTCATCTTCTTaGGGGGCGACTGCGGCTTCT +
Preference number: 4 (lower is better)
Translates to: RSRLLVPPMVRKQRPPSAPLSSS*GATAAS
Trigger: AGAAGCCGCAGTCGCCCCCCAAGAAGATGAAAGGGG...AGCTGAAGGCGGACGTTGTTTCCTAACCATAGGTGGAACGAGGAGACGGGAGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CCA 90 bp AGGCAGTCTTTTCCGTCTTCCTCGCTCGCTTTTCTTCTTTCCTGGAACAGATGCTGCTCTTCCCGGCCGTaGCCCGCTTCGGCCGATTCC +
Preference number: 4 (lower is better)
Translates to: RQSFPSSSLAFLLSWNRCCSSRP*PASADS
Trigger: GGAATCGGCCGAAGCGGGCCACGGCCGGGAAGAGCA...GCATCTGTTCCAGGAAAGAAGAAAAGCGAGCGAGGAAGACGGAAAAGACTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR TCA 90 bp AAATCAGGCACAGGTCTCCCTCATGTGACCCCTCCAAGGCAGGCAGTCTTTTCCTGTTTCCGTAAGTCCTaGGCCGACCGATGCAGAGGG +
Preference number: 4 (lower is better)
Translates to: KSGTGLPHVTPPRQAVFSCFRKS*ADRCRG
Trigger: CCCTCTGCATCGGTCGGCTCAGGACTTACGGAAACA...GGAAAAGACTGCCTGCCTTGGAGGGGTCACATGAGGGAGACCTGTGCCTGATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR TCA 90 bp AAATCAGGCACAGGTCTCCCTCATGTGACCCCTCCAAGGCAGGCAGTCTTTTCCTGGCTTTGGTGTATGTaGCAGCCCCCTTCGTCACCG +
Preference number: 4 (lower is better)
Translates to: KSGTGLPHVTPPRQAVFSWLWCM*QPPSSP
Trigger: CGGTGACGAAGGGGGCTGTCACATACACCAAAGCCA...GGAAAAGACTGCCTGCCTTGGAGGGGTCACATGAGGGAGACCTGTGCCTGATTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR TCA 90 bp AGGCAGTCTTTTCCGTCTTCCTCGCTCGCTTTTCTTCTTTCCTGGAACAGATGCGGGCCACGCCGTGGATaGGCCCATTCTTGGGCTCGA +
Preference number: 4 (lower is better)
Translates to: RQSFPSSSLAFLLSWNRCGPRRG*AHSWAR
Trigger: TCGAGCCCAAGAATGGGCTCATCCACGGCGTGGCCC...GCATCTGTTCCAGGAAAGAAGAAAAGCGAGCGAGGAAGACGGAAAAGACTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR TCA 90 bp AAATCAGGCACAGGTCTCCCTCATGTGACCCCTCCAAGGCAGGCAGTCTTTTCCTATTGGGGAGGACGGTaGGGTTCCATCCATGCCTCG +
Preference number: 4 (lower is better)
Translates to: KSGTGLPHVTPPRQAVFSYWGGR*GSIHAS
Trigger: CGAGGCATGGATGGAACCTCACCGTCCTCCCCAATA...GGAAAAGACTGCCTGCCTTGGAGGGGTCACATGAGGGAGACCTGTGCCTGATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR TCA 90 bp AAATCAGGCACAGGTCTCCCTCATGTGACCCCTCCAAGGCAGGCAGTCTTTTCCCTGACACCTCCTCTCTaGCGTCTCCAACTGCAGCCA +
Preference number: 4 (lower is better)
Translates to: KSGTGLPHVTPPRQAVFSLTPPL*RLQLQP
Trigger: TGGCTGCAGTTGGAGACGTCAGAGAGGAGGTGTCAG...GGAAAAGACTGCCTGCCTTGGAGGGGTCACATGAGGGAGACCTGTGCCTGATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR GCA 90 bp CAGATCACAAGCTCATCTGGCACACGGCAGAAGACGACAGCCAAAGCAAAGCCATGCCATGTGCTTGTCTaGCTGGCGTGCTCTTCCCGG +
Preference number: 4 (lower is better)
Translates to: QITSSSGTRQKTTAKAKPCHVLV*LACSSR
Trigger: CCGGGAAGAGCACGCCAGGCAGACAAGCACATGGCA...TGGCTTTGCTTTGGCTGTCGTCTTCTGCCGTGTGCCAGATGAGCTTGTGATCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR GCA 90 bp CCTGGCAGTCACCACTGGCAAGCTCAGTGCAATATGGGTAGCTACGGGATTGATTGCCATGTGCTTGTCTaGCTGGCGTGCTCTTCCCGG +
Preference number: 4 (lower is better)
Translates to: PGSHHWQAQCNMGSYGIDCHVLV*LACSSR
Trigger: CCGGGAAGAGCACGCCAGGCAGACAAGCACATGGCA...ATCAATCCCGTAGCTACCCATATTGCACTGAGCTTGCCAGTGGTGACTGCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR GCA 90 bp TTCCTGGCAGTCACCACTGGCAAGCTCAGTGCAATATGGGTAGCTACGGGATTGGTCCGCCTTGCCATGTaGTTGTCTGCCTGGCGTGCT +
Preference number: 4 (lower is better)
Translates to: FLAVTTGKLSAIWVATGLVRLAM*LSAWRA
Trigger: AGCACGCCAGGCAGACAAGCACATGGCAAGGCGGAC...CAATCCCGTAGCTACCCATATTGCACTGAGCTTGCCAGTGGTGACTGCCAGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR GCA 90 bp TTCCTGGCAGTCACCACTGGCAAGCTCAGTGCAATATGGGTAGCTACGGGATTGAGGCGCTGTCCGCCTTaGCATGTGCTTGTCTGCCTG +
Preference number: 4 (lower is better)
Translates to: FLAVTTGKLSAIWVATGLRRCPP*HVLVCL
Trigger: CAGGCAGACAAGCACATGGCAAGGCGGACAGCGCCT...CAATCCCGTAGCTACCCATATTGCACTGAGCTTGCCAGTGGTGACTGCCAGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR GCA 90 bp CAGATCACAAGCTCATCTGGCACACGGCAGAAGACGACAGCCAAAGCAAAGCCACTTCCAGCGGCCCCTTaGGCTTCTCCAGGATCTCCT +
Preference number: 4 (lower is better)
Translates to: QITSSSGTRQKTTAKAKPLPAAP*ASPGSP
Trigger: AGGAGATCCTGGAGAAGCGCAAGGGGCCGCTGGAAG...TGGCTTTGCTTTGGCTGTCGTCTTCTGCCGTGTGCCAGATGAGCTTGTGATCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR GCA 90 bp CAGATCACAAGCTCATCTGGCACACGGCAGAAGACGACAGCCAAAGCAAAGCCACTTGCCGCAGTGCACTaGCACGTGGCAGTCCTTCTC +
Preference number: 4 (lower is better)
Translates to: QITSSSGTRQKTTAKAKPLAAVH*HVAVLL
Trigger: GAGAAGGACTGCCACGTGGCAGTGCACTGCGGCAAG...TGGCTTTGCTTTGGCTGTCGTCTTCTGCCGTGTGCCAGATGAGCTTGTGATCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR GCA 90 bp TTCCTGGCAGTCACCACTGGCAAGCTCAGTGCAATATGGGTAGCTACGGGATTGGGGGTGCCATTGGCTTaGAGCAGGGTGTGGACCACA +
Preference number: 4 (lower is better)
Translates to: FLAVTTGKLSAIWVATGLGVPLA*SRVWTT
Trigger: TGTGGTCCACACCCTGCTGCAAGCCAATGGCACCCC...CAATCCCGTAGCTACCCATATTGCACTGAGCTTGCCAGTGGTGACTGCCAGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR GCA 90 bp TTCCTGGCAGTCACCACTGGCAAGCTCAGTGCAATATGGGTAGCTACGGGATTGAACAGCTGCCTGCGCTaGCGCAGCTCTGTATCCCTG +
Preference number: 4 (lower is better)
Translates to: FLAVTTGKLSAIWVATGLNSCLR*RSSVSL
Trigger: CAGGGATACAGAGCTGCGGCAGCGCAGGCAGCTGTT...CAATCCCGTAGCTACCCATATTGCACTGAGCTTGCCAGTGGTGACTGCCAGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR GCA 90 bp CAGATCACAAGCTCATCTGGCACACGGCAGAAGACGACAGCCAAAGCAAAGCCACCTCGAACAGCTGCCTaGGCTGCCGCAGCTCTGTAT +
Preference number: 4 (lower is better)
Translates to: QITSSSGTRQKTTAKAKPPRTAA*AAAALY
Trigger: ATACAGAGCTGCGGCAGCGCAGGCAGCTGTTCGAGG...TGGCTTTGCTTTGGCTGTCGTCTTCTGCCGTGTGCCAGATGAGCTTGTGATCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CCA 90 bp TTCCTGGCAGTCACCACTGGCAAGCTCAGTGCAATATGGGTAGCTACGGGATTGCTTCCAGTCTCCTCTTaGAGTTCCGCAGCCCCTCCC +
Preference number: 4 (lower is better)
Translates to: FLAVTTGKLSAIWVATGLLPVSS*SSAAPP
Trigger: GGGAGGGGCTGCGGAACTCCAAGAGGAGACTGGAAG...CAATCCCGTAGCTACCCATATTGCACTGAGCTTGCCAGTGGTGACTGCCAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CCA 90 bp AAATCAGGCACAGGTCTCCCTCATGTGACCCCTCCAAGGCAGGCAGTCTTTTCCCCCCTTTCATCTTCTTaGGGGGCGACTGCGGCTTCT +
Preference number: 4 (lower is better)
Translates to: KSGTGLPHVTPPRQAVFSPLSSS*GATAAS
Trigger: AGAAGCCGCAGTCGCCCCCCAAGAAGATGAAAGGGG...GGAAAAGACTGCCTGCCTTGGAGGGGTCACATGAGGGAGACCTGTGCCTGATTT
57% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CCA 90 bp CCTGGCAGTCACCACTGGCAAGCTCAGTGCAATATGGGTAGCTACGGGATTGATATGTGCTTGTCTGCCTaGCGTGCTCTTCCCGGCCGT +
Preference number: 4 (lower is better)
Translates to: PGSHHWQAQCNMGSYGIDMCLSA*RALPGR
Trigger: ACGGCCGGGAAGAGCACGCCAGGCAGACAAGCACAT...ATCAATCCCGTAGCTACCCATATTGCACTGAGCTTGCCAGTGGTGACTGCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CCA 90 bp TTCCTGGCAGTCACCACTGGCAAGCTCAGTGCAATATGGGTAGCTACGGGATTGGGTCCTGGGCAGTTCTaGGGATGCGCAGCATGTCTG +
Preference number: 4 (lower is better)
Translates to: FLAVTTGKLSAIWVATGLGPGQF*GCAACL
Trigger: CAGACATGCTGCGCATCCCCAGAACTGCCCAGGACC...CAATCCCGTAGCTACCCATATTGCACTGAGCTTGCCAGTGGTGACTGCCAGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CCA 90 bp AGGCAGTCTTTTCCGTCTTCCTCGCTCGCTTTTCTTCTTTCCTGGAACAGATGCCCGCCGGTGCTCCTCTaGGGACAGGGAGTCGTAGGA +
Preference number: 4 (lower is better)
Translates to: RQSFPSSSLAFLLSWNRCPPVLL*GQGVVG
Trigger: TCCTACGACTCCCTGTCCCCAGAGGAGCACCGGCGG...GCATCTGTTCCAGGAAAGAAGAAAAGCGAGCGAGGAAGACGGAAAAGACTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CCA 90 bp CGGCTTCCCAGATCACAAGCTCATCTGGCACACGGCAGAAGACGACAGCCAAAGGGGTGGAACTTGTGGTaGTCGTTCTCTGTGTGGCCT +
Preference number: 4 (lower is better)
Translates to: RLPRSQAHLAHGRRRQPKGWNLW*SFSVWP
Trigger: AGGCCACACAGAGAACGACCACCACAAGTTCCACCC...CTTTGGCTGTCGTCTTCTGCCGTGTGCCAGATGAGCTTGTGATCTGGGAAGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CCA 90 bp CGGCTTCCCAGATCACAAGCTCATCTGGCACACGGCAGAAGACGACAGCCAAAGTTGCTCGATTTCGGCTaGGGCAGGCTCCTTGCTGAA +
Preference number: 4 (lower is better)
Translates to: RLPRSQAHLAHGRRRQPKLLDFG*GRLLAE
Trigger: TTCAGCAAGGAGCCTGCCCCAGCCGAAATCGAGCAA...CTTTGGCTGTCGTCTTCTGCCGTGTGCCAGATGAGCTTGTGATCTGGGAAGCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CCA 90 bp CGCTCCCGTCTCCTCGTTCCACCTATGGTTAGGAAACAACGTCCGCCTTCAGCTCAGTGCACTGCCACGTaGCAGTCCTTCTCTTCCACT +
Preference number: 4 (lower is better)
Translates to: RSRLLVPPMVRKQRPPSAQCTAT*QSFSST
Trigger: AGTGGAAGAGAAGGACTGCCACGTGGCAGTGCACTG...AGCTGAAGGCGGACGTTGTTTCCTAACCATAGGTGGAACGAGGAGACGGGAGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CCA 90 bp CGGCTTCCCAGATCACAAGCTCATCTGGCACACGGCAGAAGACGACAGCCAAAGCGAGGTGACGCAGGATaGACCCTGTGTTATTGGGGA +
Preference number: 4 (lower is better)
Translates to: RLPRSQAHLAHGRRRQPKRGDAG*TLCYWG
Trigger: TCCCCAATAACACAGGGTCCATCCTGCGTCACCTCG...CTTTGGCTGTCGTCTTCTGCCGTGTGCCAGATGAGCTTGTGATCTGGGAAGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CCA 90 bp CAAGCTCATCTGGCACACGGCAGAAGACGACAGCCAAAGCAAAGCCATTTCAAGGCCCTGGGGTGCCATTaGCTTGCAGCAGGGTGTGGA +
Preference number: 4 (lower is better)
Translates to: QAHLAHGRRRQPKQSHFKALGCH*LAAGCG
Trigger: TCCACACCCTGCTGCAAGCCAATGGCACCCCAGGGC...CTTGAAATGGCTTTGCTTTGGCTGTCGTCTTCTGCCGTGTGCCAGATGAGCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CCA 90 bp CCTGGCAGTCACCACTGGCAAGCTCAGTGCAATATGGGTAGCTACGGGATTGATCAGCATCTGCAGCCCTaGGGTGCCATTGGCTTGCAG +
Preference number: 4 (lower is better)
Translates to: PGSHHWQAQCNMGSYGIDQHLQP*GAIGLQ
Trigger: CTGCAAGCCAATGGCACCCCAGGGCTGCAGATGCTG...ATCAATCCCGTAGCTACCCATATTGCACTGAGCTTGCCAGTGGTGACTGCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CCA 90 bp CGGCTTCCCAGATCACAAGCTCATCTGGCACACGGCAGAAGACGACAGCCAAAGAAGCAGACGACAAACTaGCCACTCTGCTGCACGGTC +
Preference number: 4 (lower is better)
Translates to: RLPRSQAHLAHGRRRQPKKQTTN*PLCCTV
Trigger: GACCGTGCAGCAGAGTGGCCAGTTTGTCGTCTGCTT...CTTTGGCTGTCGTCTTCTGCCGTGTGCCAGATGAGCTTGTGATCTGGGAAGCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CCA 90 bp TTCCTGGCAGTCACCACTGGCAAGCTCAGTGCAATATGGGTAGCTACGGGATTGTCACTGTCATCCTGGTaGGAAGCGCGACGCTCCGGA +
Preference number: 4 (lower is better)
Translates to: FLAVTTGKLSAIWVATGLSLSSW*EARRSG
Trigger: TCCGGAGCGTCGCGCTTCCCACCAGGATGACAGTGA...CAATCCCGTAGCTACCCATATTGCACTGAGCTTGCCAGTGGTGACTGCCAGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397311.4
CDS-3UTR CCA 90 bp TTCCTGGCAGTCACCACTGGCAAGCTCAGTGCAATATGGGTAGCTACGGGATTGCCATCACTGTCATCCTaGTGGGAAGCGCGACGCTCC +
Preference number: 4 (lower is better)
Translates to: FLAVTTGKLSAIWVATGLPSLSS*WEARRS
Trigger: GGAGCGTCGCGCTTCCCACCAGGATGACAGTGATGG...CAATCCCGTAGCTACCCATATTGCACTGAGCTTGCCAGTGGTGACTGCCAGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397311.4
CDS-3UTR TCA 90 bp CGCTCCCGTCTCCTCGTTCCACCTATGGTTAGGAAACAACGTCCGCCTTCAGCTGAACTGGGCTTGTGGTaGTTGGGTTTGGTGTCCTTG +
Preference number: 4 (lower is better)
Translates to: RSRLLVPPMVRKQRPPSAELGLW*LGLVSL
Trigger: CAAGGACACCAAACCCAATCACCACAAGCCCAGTTC...AGCTGAAGGCGGACGTTGTTTCCTAACCATAGGTGGAACGAGGAGACGGGAGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR TCA 90 bp CGCTCCCGTCTCCTCGTTCCACCTATGGTTAGGAAACAACGTCCGCCTTCAGCTCTGAGATTGTGTGGTTaGCAGCGGAACTGGGCTTGT +
Preference number: 4 (lower is better)
Translates to: RSRLLVPPMVRKQRPPSALRLCG*QRNWAC
Trigger: ACAAGCCCAGTTCCGCTGTCAACCACACAATCTCAG...AGCTGAAGGCGGACGTTGTTTCCTAACCATAGGTGGAACGAGGAGACGGGAGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR TCA 90 bp AAATCAGGCACAGGTCTCCCTCATGTGACCCCTCCAAGGCAGGCAGTCTTTTCCCCGACTCGATGTAGATaGGCGGATCGTGGAACTCCT +
Preference number: 4 (lower is better)
Translates to: KSGTGLPHVTPPRQAVFSPTRCR*ADRGTP
Trigger: AGGAGTTCCACGATCCGCTCATCTACATCGAGTCGG...GGAAAAGACTGCCTGCCTTGGAGGGGTCACATGAGGGAGACCTGTGCCTGATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR TCA 90 bp AGGCAGTCTTTTCCGTCTTCCTCGCTCGCTTTTCTTCTTTCCTGGAACAGATGCCCGAACTTCTCCACCTaGGCGCGGACCGACTCGATG +
Preference number: 4 (lower is better)
Translates to: RQSFPSSSLAFLLSWNRCPNFST*ARTDSM
Trigger: CATCGAGTCGGTCCGCGCTCAGGTGGAGAAGTTCGG...GCATCTGTTCCAGGAAAGAAGAAAAGCGAGCGAGGAAGACGGAAAAGACTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR TCA 90 bp AGGCAGTCTTTTCCGTCTTCCTCGCTCGCTTTTCTTCTTTCCTGGAACAGATGCACCGCATCTCATCGTTaGGCTTGCACTCGGGCCGCC +
Preference number: 4 (lower is better)
Translates to: RQSFPSSSLAFLLSWNRCTASHR*ACTRAA
Trigger: GGCGGCCCGAGTGCAAGCTCAACGATGAGATGCGGT...GCATCTGTTCCAGGAAAGAAGAAAAGCGAGCGAGGAAGACGGAAAAGACTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR TCA 90 bp CTTCTGCAACAACAACCAACAAAGTGGATCATAGGACGTTCCTGGCAGTCACCAGCTCACAGCCCCCTATaGGCGGGAGCTCGTCCATGG +
Preference number: 4 (lower is better)
Translates to: LLQQQPTKWIIGRSWQSPAHSPL*AGARPW
Trigger: CCATGGACGAGCTCCCGCTCATAGGGGGCTGTGAGC...TGGTGACTGCCAGGAACGTCCTATGATCCACTTTGTTGGTTGTTGTTGCAGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR TCA 90 bp CGGCTTCCCAGATCACAAGCTCATCTGGCACACGGCAGAAGACGACAGCCAAAGGTCTCGAGACCAGCATaGGGTAGAAAAGACCATGCC +
Preference number: 4 (lower is better)
Translates to: RLPRSQAHLAHGRRRQPKVSRPA*GRKDHA
Trigger: GGCATGGTCTTTTCTACCTCATGCTGGTCTCGAGAC...CTTTGGCTGTCGTCTTCTGCCGTGTGCCAGATGAGCTTGTGATCTGGGAAGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR TCA 90 bp TTCCTGGCAGTCACCACTGGCAAGCTCAGTGCAATATGGGTAGCTACGGGATTGCTCATCCAGGAGGGCTaGGATGGTACTGAGAGTGGG +
Preference number: 4 (lower is better)
Translates to: FLAVTTGKLSAIWVATGLLIQEG*DGTESG
Trigger: CCCACTCTCAGTACCATCTCAGCCCTCCTGGATGAG...CAATCCCGTAGCTACCCATATTGCACTGAGCTTGCCAGTGGTGACTGCCAGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR GCA 90 bp AGGCAGTCTTTTCCGTCTTCCTCGCTCGCTTTTCTTCTTTCCTGGAACAGATGCTGGTTAGCTGAAGCCTaGTCCCGGCGGCTGTCAGCC +
Preference number: 4 (lower is better)
Translates to: RQSFPSSSLAFLLSWNRCWLAEA*SRRLSA
Trigger: GGCTGACAGCCGCCGGGAGCAGGCTTCAGCTAACCA...GCATCTGTTCCAGGAAAGAAGAAAAGCGAGCGAGGAAGACGGAAAAGACTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR GCA 90 bp AGGCAGTCTTTTCCGTCTTCCTCGCTCGCTTTTCTTCTTTCCTGGAACAGATGCTCCACCTTGCCGCAGTaGACTGCCACGTGGCAGTCC +
Preference number: 4 (lower is better)
Translates to: RQSFPSSSLAFLLSWNRCSTLPQ*TATWQS
Trigger: GGACTGCCACGTGGCAGTGCACTGCGGCAAGGTGGA...GCATCTGTTCCAGGAAAGAAGAAAAGCGAGCGAGGAAGACGGAAAAGACTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR GCA 90 bp CTTCTGCAACAACAACCAACAAAGTGGATCATAGGACGTTCCTGGCAGTCACCACGTCCGCCACCGTGCTaGTGCCATCGTGGCTGCCAT +
Preference number: 4 (lower is better)
Translates to: LLQQQPTKWIIGRSWQSPRPPPC*CHRGCH
Trigger: ATGGCAGCCACGATGGCAGCAGCACGGTGGCGGACG...TGGTGACTGCCAGGAACGTCCTATGATCCACTTTGTTGGTTGTTGTTGCAGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CCA 90 bp CCTGGCAGTCACCACTGGCAAGCTCAGTGCAATATGGGTAGCTACGGGATTGATTTTGTGCTTGCAGCCTaGGCCTTTTCCTCGACGGCC +
Preference number: 4 (lower is better)
Translates to: PGSHHWQAQCNMGSYGIDFVLAA*AFSSTA
Trigger: GGCCGTCGAGGAAAAGGCCCAGGCTGCAAGCACAAA...ATCAATCCCGTAGCTACCCATATTGCACTGAGCTTGCCAGTGGTGACTGCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CCA 90 bp CGCTCCCGTCTCCTCGTTCCACCTATGGTTAGGAAACAACGTCCGCCTTCAGCTGGGTTTTTCCTTTCCTaGGGGTCGACTGGCATGAAG +
Preference number: 4 (lower is better)
Translates to: RSRLLVPPMVRKQRPPSAGFFLS*GSTGMK
Trigger: CTTCATGCCAGTCGACCCCCAGGAAAGGAAAAACCC...AGCTGAAGGCGGACGTTGTTTCCTAACCATAGGTGGAACGAGGAGACGGGAGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CCA 90 bp CTTCTGCAACAACAACCAACAAAGTGGATCATAGGACGTTCCTGGCAGTCACCATGGCAGCAAGCCCCTTaGCCGAGGAACCCGTGGAGG +
Preference number: 4 (lower is better)
Translates to: LLQQQPTKWIIGRSWQSPWQQAP*PRNPWR
Trigger: CCTCCACGGGTTCCTCGGCCAAGGGGCTTGCTGCCA...TGGTGACTGCCAGGAACGTCCTATGATCCACTTTGTTGGTTGTTGTTGCAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CCA 90 bp ACCAACAAAGTGGATCATAGGACGTTCCTGGCAGTCACCACTGGCAAGCTCAGTTGCGGCTTCTCCGCCTaGTGTGCCTCTTCCAGTCTC +
Preference number: 4 (lower is better)
Translates to: TNKVDHRTFLAVTTGKLSCGFSA*CASSSL
Trigger: GAGACTGGAAGAGGCACACCAGGCGGAGAAGCCGCA...ACTGAGCTTGCCAGTGGTGACTGCCAGGAACGTCCTATGATCCACTTTGTTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CCA 90 bp ACCAACAAAGTGGATCATAGGACGTTCCTGGCAGTCACCACTGGCAAGCTCAGTATGTGCTTGTCTGCCTaGCGTGCTCTTCCCGGCCGT +
Preference number: 4 (lower is better)
Translates to: TNKVDHRTFLAVTTGKLSMCLSA*RALPGR
Trigger: ACGGCCGGGAAGAGCACGCCAGGCAGACAAGCACAT...ACTGAGCTTGCCAGTGGTGACTGCCAGGAACGTCCTATGATCCACTTTGTTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CCA 90 bp CAGATCACAAGCTCATCTGGCACACGGCAGAAGACGACAGCCAAAGCAAAGCCAAAGCGGGGCAGAGGGTaGAACTTGTGGTGGTCGTTC +
Preference number: 4 (lower is better)
Translates to: QITSSSGTRQKTTAKAKPKRGRG*NLWWSF
Trigger: GAACGACCACCACAAGTTCCACCCTCTGCCCCGCTT...TGGCTTTGCTTTGGCTGTCGTCTTCTGCCGTGTGCCAGATGAGCTTGTGATCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CCA 90 bp TTCCTGGCAGTCACCACTGGCAAGCTCAGTGCAATATGGGTAGCTACGGGATTGCACTGCCGTGAGTGTTaGTGTCCACCTTGCCGCAGT +
Preference number: 4 (lower is better)
Translates to: FLAVTTGKLSAIWVATGLHCREC*CPPCRS
Trigger: ACTGCGGCAAGGTGGACACCAACACTCACGGCAGTG...CAATCCCGTAGCTACCCATATTGCACTGAGCTTGCCAGTGGTGACTGCCAGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CCA 90 bp AGGCAGTCTTTTCCGTCTTCCTCGCTCGCTTTTCTTCTTTCCTGGAACAGATGCGCCCTGGGGTGCCATTaGCTTGCAGCAGGGTGTGGA +
Preference number: 4 (lower is better)
Translates to: RQSFPSSSLAFLLSWNRCALGCH*LAAGCG
Trigger: TCCACACCCTGCTGCAAGCCAATGGCACCCCAGGGC...GCATCTGTTCCAGGAAAGAAGAAAAGCGAGCGAGGAAGACGGAAAAGACTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CCA 90 bp CGCTCCCGTCTCCTCGTTCCACCTATGGTTAGGAAACAACGTCCGCCTTCAGCTCCTGGCAGTCACCACTaGCAAGCTCAGTGCAATATG +
Preference number: 4 (lower is better)
Translates to: RSRLLVPPMVRKQRPPSAPGSHH*QAQCNM
Trigger: CATATTGCACTGAGCTTGCCAGTGGTGACTGCCAGG...AGCTGAAGGCGGACGTTGTTTCCTAACCATAGGTGGAACGAGGAGACGGGAGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR TCA 90 bp AAATCAGGCACAGGTCTCCCTCATGTGACCCCTCCAAGGCAGGCAGTCTTTTCCCACAGTTTTGGATGGTaGAGGTCTGACCTCGCGCAT +
Preference number: 4 (lower is better)
Translates to: KSGTGLPHVTPPRQAVFSHSFGW*RSDLAH
Trigger: ATGCGCGAGGTCAGACCTTCACCATCCAAAACTGTG...GGAAAAGACTGCCTGCCTTGGAGGGGTCACATGAGGGAGACCTGTGCCTGATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR TCA 90 bp ACCAACAAAGTGGATCATAGGACGTTCCTGGCAGTCACCACTGGCAAGCTCAGTTGGCTTTGGTGTATGTaGCAGCCCCCTTCGTCACCG +
Preference number: 4 (lower is better)
Translates to: TNKVDHRTFLAVTTGKLSWLWCM*QPPSSP
Trigger: CGGTGACGAAGGGGGCTGTCACATACACCAAAGCCA...ACTGAGCTTGCCAGTGGTGACTGCCAGGAACGTCCTATGATCCACTTTGTTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR TCA 90 bp AAATCAGGCACAGGTCTCCCTCATGTGACCCCTCCAAGGCAGGCAGTCTTTTCCCACCTCCTTAGTGCATaGCTTTGGGTTCAACCTGCC +
Preference number: 4 (lower is better)
Translates to: KSGTGLPHVTPPRQAVFSHLLSA*LWVQPA
Trigger: GGCAGGTTGAACCCAAAGTCATGCACTAAGGAGGTG...GGAAAAGACTGCCTGCCTTGGAGGGGTCACATGAGGGAGACCTGTGCCTGATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR TCA 90 bp CTTCTGCAACAACAACCAACAAAGTGGATCATAGGACGTTCCTGGCAGTCACCACCGAACTTCTCCACCTaGGCGCGGACCGACTCGATG +
Preference number: 4 (lower is better)
Translates to: LLQQQPTKWIIGRSWQSPPNFST*ARTDSM
Trigger: CATCGAGTCGGTCCGCGCTCAGGTGGAGAAGTTCGG...TGGTGACTGCCAGGAACGTCCTATGATCCACTTTGTTGGTTGTTGTTGCAGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR TCA 90 bp CGGCTTCCCAGATCACAAGCTCATCTGGCACACGGCAGAAGACGACAGCCAAAGACTTGTGGAAGTCATTaGGGACGCCTTTGTCCTCCT +
Preference number: 4 (lower is better)
Translates to: RLPRSQAHLAHGRRRQPKTCGSH*GRLCPP
Trigger: AGGAGGACAAAGGCGTCCTCAATGACTTCCACAAGT...CTTTGGCTGTCGTCTTCTGCCGTGTGCCAGATGAGCTTGTGATCTGGGAAGCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR TCA 90 bp CAGATCACAAGCTCATCTGGCACACGGCAGAAGACGACAGCCAAAGCAAAGCCACCTCCGGGGAGATCATaGCGTTGCTTTCCAGCATCT +
Preference number: 4 (lower is better)
Translates to: QITSSSGTRQKTTAKAKPPPGRS*RCFPAS
Trigger: AGATGCTGGAAAGCAACGTCATGATCTCCCCGGAGG...TGGCTTTGCTTTGGCTGTCGTCTTCTGCCGTGTGCCAGATGAGCTTGTGATCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR TCA 90 bp CAAGCTCATCTGGCACACGGCAGAAGACGACAGCCAAAGCAAAGCCATTTCAAGCGGTCCTGTGCACCTTaGTCCCCTCTTTGCACAGCA +
Preference number: 4 (lower is better)
Translates to: QAHLAHGRRRQPKQSHFKRSCAP*SPLCTA
Trigger: TGCTGTGCAAAGAGGGGATCAAGGTGCACAGGACCG...CTTGAAATGGCTTTGCTTTGGCTGTCGTCTTCTGCCGTGTGCCAGATGAGCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR TCA 90 bp ACCAACAAAGTGGATCATAGGACGTTCCTGGCAGTCACCACTGGCAAGCTCAGTCTCATCCAGGAGGGCTaGGATGGTACTGAGAGTGGG +
Preference number: 4 (lower is better)
Translates to: TNKVDHRTFLAVTTGKLSLIQEG*DGTESG
Trigger: CCCACTCTCAGTACCATCTCAGCCCTCCTGGATGAG...ACTGAGCTTGCCAGTGGTGACTGCCAGGAACGTCCTATGATCCACTTTGTTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR GCA 90 bp CGCTCCCGTCTCCTCGTTCCACCTATGGTTAGGAAACAACGTCCGCCTTCAGCTTTCCAAAATACACCATaGTGTTGGGCAGCGCAGGAG +
Preference number: 4 (lower is better)
Translates to: RSRLLVPPMVRKQRPPSAFQNTP*CWAAQE
Trigger: CTCCTGCGCTGCCCAACAGCATGGTGTATTTTGGAA...AGCTGAAGGCGGACGTTGTTTCCTAACCATAGGTGGAACGAGGAGACGGGAGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR GCA 90 bp GCCATAGAAACCGGACAACCACATTGGAAAACACTTGACTGTTTCTGTAATTGTAGCCCCTCCCGCAGCTaGAGGCCCTCCCGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: AIETGQPHWKTLDCFCNCSPSRS*RPSRSC
Trigger: GCAGCTGCGGGAGGGCCTGCAGCTGCGGGAGGGGCT...ACAATTACAGAAACAGTCAAGTGTTTTCCAATGTGGTTGTCCGGTTTCTATGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR GCA 90 bp GCTCAGTGCAATATGGGTAGCTACGGGATTGATGAATCCAATTATGAAACAAAGAGCCCCTCCCGCAGCTaGAGGCCCTCCCGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: AQCNMGSYGIDESNYETKSPSRS*RPSRSC
Trigger: GCAGCTGCGGGAGGGCCTGCAGCTGCGGGAGGGGCT...CTTTGTTTCATAATTGGATTCATCAATCCCGTAGCTACCCATATTGCACTGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR GCA 90 bp CGCTCCCGTCTCCTCGTTCCACCTATGGTTAGGAAACAACGTCCGCCTTCAGCTAGGTCAGTCACTTGCTaGATGCCGCCCATCTCATTA +
Preference number: 4 (lower is better)
Translates to: RSRLLVPPMVRKQRPPSARSVTC*MPPISL
Trigger: TAATGAGATGGGCGGCATGCAGCAAGTGACTGACCT...AGCTGAAGGCGGACGTTGTTTCCTAACCATAGGTGGAACGAGGAGACGGGAGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR GCA 90 bp CTTCTGCAACAACAACCAACAAAGTGGATCATAGGACGTTCCTGGCAGTCACCATCCACCTTGCCGCAGTaGACTGCCACGTGGCAGTCC +
Preference number: 4 (lower is better)
Translates to: LLQQQPTKWIIGRSWQSPSTLPQ*TATWQS
Trigger: GGACTGCCACGTGGCAGTGCACTGCGGCAAGGTGGA...TGGTGACTGCCAGGAACGTCCTATGATCCACTTTGTTGGTTGTTGTTGCAGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR GCA 90 bp CAAGCTCATCTGGCACACGGCAGAAGACGACAGCCAAAGCAAAGCCATTTCAAGTGTTGGTGTCCACCTTaGCGCAGTGCACTGCCACGT +
Preference number: 4 (lower is better)
Translates to: QAHLAHGRRRQPKQSHFKCWCPP*RSALPR
Trigger: ACGTGGCAGTGCACTGCGGCAAGGTGGACACCAACA...CTTGAAATGGCTTTGCTTTGGCTGTCGTCTTCTGCCGTGTGCCAGATGAGCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR GCA 90 bp AAATCAGGCACAGGTCTCCCTCATGTGACCCCTCCAAGGCAGGCAGTCTTTTCCCTACTGGGAATCCACTaGCGTGAGTGTTGGTGTCCA +
Preference number: 4 (lower is better)
Translates to: KSGTGLPHVTPPRQAVFSLLGIH*RECWCP
Trigger: TGGACACCAACACTCACGGCAGTGGATTCCCAGTAG...GGAAAAGACTGCCTGCCTTGGAGGGGTCACATGAGGGAGACCTGTGCCTGATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR GCA 90 bp CAGATCACAAGCTCATCTGGCACACGGCAGAAGACGACAGCCAAAGCAAAGCCACCACTGTCGCTCTCTTaGGGGGACCTCTTTTTGGTG +
Preference number: 4 (lower is better)
Translates to: QITSSSGTRQKTTAKAKPPLSLS*GDLFLV
Trigger: CACCAAAAAGAGGTCCCCGCAAGAGAGCGACAGTGG...TGGCTTTGCTTTGGCTGTCGTCTTCTGCCGTGTGCCAGATGAGCTTGTGATCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR GCA 90 bp ACCAACAAAGTGGATCATAGGACGTTCCTGGCAGTCACCACTGGCAAGCTCAGTACGTCCGCCTTCAGCTaGCACAACCGCCCAGAGAAA +
Preference number: 4 (lower is better)
Translates to: TNKVDHRTFLAVTTGKLSTSAFS*HNRPEK
Trigger: TTTCTCTGGGCGGTTGTGGCAGCTGAAGGCGGACGT...ACTGAGCTTGCCAGTGGTGACTGCCAGGAACGTCCTATGATCCACTTTGTTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR GCA 90 bp AAATCAGGCACAGGTCTCCCTCATGTGACCCCTCCAAGGCAGGCAGTCTTTTCCAGATGCATAGTGATGTaGTGGTGGAGAGCCCACTCG +
Preference number: 4 (lower is better)
Translates to: KSGTGLPHVTPPRQAVFSRCIVM*WWRAHS
Trigger: CGAGTGGGCTCTCCACCAGCACATCACTATGCATCT...GGAAAAGACTGCCTGCCTTGGAGGGGTCACATGAGGGAGACCTGTGCCTGATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CCA 90 bp ACCAACAAAGTGGATCATAGGACGTTCCTGGCAGTCACCACTGGCAAGCTCAGTTTTGTGCTTGCAGCCTaGGCCTTTTCCTCGACGGCC +
Preference number: 4 (lower is better)
Translates to: TNKVDHRTFLAVTTGKLSFVLAA*AFSSTA
Trigger: GGCCGTCGAGGAAAAGGCCCAGGCTGCAAGCACAAA...ACTGAGCTTGCCAGTGGTGACTGCCAGGAACGTCCTATGATCCACTTTGTTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CCA 90 bp AAATCAGGCACAGGTCTCCCTCATGTGACCCCTCCAAGGCAGGCAGTCTTTTCCCCTCGCGCATCTTTTTaGCACTGGTTACACCTGCAC +
Preference number: 4 (lower is better)
Translates to: KSGTGLPHVTPPRQAVFSPRASF*HWLHLH
Trigger: GTGCAGGTGTAACCAGTGCCAAAAAGATGCGCGAGG...GGAAAAGACTGCCTGCCTTGGAGGGGTCACATGAGGGAGACCTGTGCCTGATTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CCA 90 bp TGGCAAGCTCAGTGCAATATGGGTAGCTACGGGATTGATGAATCCAATTATGAACGGGGATCTCGTCCATaGCCGCCCACCCGGCCTTGC +
Preference number: 4 (lower is better)
Translates to: WQAQCNMGSYGIDESNYERGSRP*PPTRPC
Trigger: GCAAGGCCGGGTGGGCGGCCATGGACGAGATCCCCG...TTCATAATTGGATTCATCAATCCCGTAGCTACCCATATTGCACTGAGCTTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CCA 90 bp TTCCTGGCAGTCACCACTGGCAAGCTCAGTGCAATATGGGTAGCTACGGGATTGTTGCTCGATTTCGGCTaGGGCAGGCTCCTTGCTGAA +
Preference number: 4 (lower is better)
Translates to: FLAVTTGKLSAIWVATGLLLDFG*GRLLAE
Trigger: TTCAGCAAGGAGCCTGCCCCAGCCGAAATCGAGCAA...CAATCCCGTAGCTACCCATATTGCACTGAGCTTGCCAGTGGTGACTGCCAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CCA 90 bp TTCCTGGCAGTCACCACTGGCAAGCTCAGTGCAATATGGGTAGCTACGGGATTGCGAGGTGACGCAGGATaGACCCTGTGTTATTGGGGA +
Preference number: 4 (lower is better)
Translates to: FLAVTTGKLSAIWVATGLRGDAG*TLCYWG
Trigger: TCCCCAATAACACAGGGTCCATCCTGCGTCACCTCG...CAATCCCGTAGCTACCCATATTGCACTGAGCTTGCCAGTGGTGACTGCCAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CCA 90 bp AGGCAGTCTTTTCCGTCTTCCTCGCTCGCTTTTCTTCTTTCCTGGAACAGATGCCAGCATCTGCAGCCCTaGGGTGCCATTGGCTTGCAG +
Preference number: 4 (lower is better)
Translates to: RQSFPSSSLAFLLSWNRCQHLQP*GAIGLQ
Trigger: CTGCAAGCCAATGGCACCCCAGGGCTGCAGATGCTG...GCATCTGTTCCAGGAAAGAAGAAAAGCGAGCGAGGAAGACGGAAAAGACTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CCA 90 bp CCTGGCAGTCACCACTGGCAAGCTCAGTGCAATATGGGTAGCTACGGGATTGATTGCATAGTGATGTGCTaGTGGAGAGCCCACTCGCTC +
Preference number: 4 (lower is better)
Translates to: PGSHHWQAQCNMGSYGIDCIVMC*WRAHSL
Trigger: GAGCGAGTGGGCTCTCCACCAGCACATCACTATGCA...ATCAATCCCGTAGCTACCCATATTGCACTGAGCTTGCCAGTGGTGACTGCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR TCA 90 bp CGGCTTCCCAGATCACAAGCTCATCTGGCACACGGCAGAAGACGACAGCCAAAGACCTGCTGGAACCATTaGAAACATGCCCGTTGTGAA +
Preference number: 4 (lower is better)
Translates to: RLPRSQAHLAHGRRRQPKTCWNH*KHARCE
Trigger: TTCACAACGGGCATGTTTTCAATGGTTCCAGCAGGT...CTTTGGCTGTCGTCTTCTGCCGTGTGCCAGATGAGCTTGTGATCTGGGAAGCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR TCA 90 bp AGGCAGTCTTTTCCGTCTTCCTCGCTCGCTTTTCTTCTTTCCTGGAACAGATGCTGTTTCCGTAAGTCCTaGGCCGACCGATGCAGAGGG +
Preference number: 4 (lower is better)
Translates to: RQSFPSSSLAFLLSWNRCCFRKS*ADRCRG
Trigger: CCCTCTGCATCGGTCGGCTCAGGACTTACGGAAACA...GCATCTGTTCCAGGAAAGAAGAAAAGCGAGCGAGGAAGACGGAAAAGACTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR TCA 90 bp TTCCTGGCAGTCACCACTGGCAAGCTCAGTGCAATATGGGTAGCTACGGGATTGTGGATGGTGAAGGTCTaGCCTCGCGCATCTTTTTGG +
Preference number: 4 (lower is better)
Translates to: FLAVTTGKLSAIWVATGLWMVKV*PRASFW
Trigger: CCAAAAAGATGCGCGAGGTCAGACCTTCACCATCCA...CAATCCCGTAGCTACCCATATTGCACTGAGCTTGCCAGTGGTGACTGCCAGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR TCA 90 bp CCTGGCAGTCACCACTGGCAAGCTCAGTGCAATATGGGTAGCTACGGGATTGATCACAGTTTTGGATGGTaGAGGTCTGACCTCGCGCAT +
Preference number: 4 (lower is better)
Translates to: PGSHHWQAQCNMGSYGIDHSFGW*RSDLAH
Trigger: ATGCGCGAGGTCAGACCTTCACCATCCAAAACTGTG...ATCAATCCCGTAGCTACCCATATTGCACTGAGCTTGCCAGTGGTGACTGCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR TCA 90 bp AAATCAGGCACAGGTCTCCCTCATGTGACCCCTCCAAGGCAGGCAGTCTTTTCCTGGGTTTGGTGTCCTTaGCCAGTTCTCTCTTGGCTT +
Preference number: 4 (lower is better)
Translates to: KSGTGLPHVTPPRQAVFSWVWCP*PVLSWL
Trigger: AAGCCAAGAGAGAACTGGTCAAGGACACCAAACCCA...GGAAAAGACTGCCTGCCTTGGAGGGGTCACATGAGGGAGACCTGTGCCTGATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR TCA 90 bp TTCCTGGCAGTCACCACTGGCAAGCTCAGTGCAATATGGGTAGCTACGGGATTGGAACTGGGCTTGTGGTaGTTGGGTTTGGTGTCCTTG +
Preference number: 4 (lower is better)
Translates to: FLAVTTGKLSAIWVATGLELGLW*LGLVSL
Trigger: CAAGGACACCAAACCCAATCACCACAAGCCCAGTTC...CAATCCCGTAGCTACCCATATTGCACTGAGCTTGCCAGTGGTGACTGCCAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR TCA 90 bp CAGATCACAAGCTCATCTGGCACACGGCAGAAGACGACAGCCAAAGCAAAGCCACTGAGATTGTGTGGTTaGCAGCGGAACTGGGCTTGT +
Preference number: 4 (lower is better)
Translates to: QITSSSGTRQKTTAKAKPLRLCG*QRNWAC
Trigger: ACAAGCCCAGTTCCGCTGTCAACCACACAATCTCAG...TGGCTTTGCTTTGGCTGTCGTCTTCTGCCGTGTGCCAGATGAGCTTGTGATCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR TCA 90 bp CAGATCACAAGCTCATCTGGCACACGGCAGAAGACGACAGCCAAAGCAAAGCCACACCTCCTTAGTGCATaGCTTTGGGTTCAACCTGCC +
Preference number: 4 (lower is better)
Translates to: QITSSSGTRQKTTAKAKPHLLSA*LWVQPA
Trigger: GGCAGGTTGAACCCAAAGTCATGCACTAAGGAGGTG...TGGCTTTGCTTTGGCTGTCGTCTTCTGCCGTGTGCCAGATGAGCTTGTGATCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR TCA 90 bp TTCCTGGCAGTCACCACTGGCAAGCTCAGTGCAATATGGGTAGCTACGGGATTGAGCTTGTGGATGTGCTaGATCTGCGTGACAAACCGC +
Preference number: 4 (lower is better)
Translates to: FLAVTTGKLSAIWVATGLSLWMC*ICVTNR
Trigger: GCGGTTTGTCACGCAGATTCAGCACATCCACAAGCT...CAATCCCGTAGCTACCCATATTGCACTGAGCTTGCCAGTGGTGACTGCCAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR TCA 90 bp AGGCAGTCTTTTCCGTCTTCCTCGCTCGCTTTTCTTCTTTCCTGGAACAGATGCGGGAATCCACTGCCGTaGGTGTTGGTGTCCACCTTG +
Preference number: 4 (lower is better)
Translates to: RQSFPSSSLAFLLSWNRCGNPLP*VLVSTL
Trigger: CAAGGTGGACACCAACACTCACGGCAGTGGATTCCC...GCATCTGTTCCAGGAAAGAAGAAAAGCGAGCGAGGAAGACGGAAAAGACTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR TCA 90 bp CGCTCCCGTCTCCTCGTTCCACCTATGGTTAGGAAACAACGTCCGCCTTCAGCTCCTCGAAAAGGGTTCTaGTTTTCCTACTGGGAATCC +
Preference number: 4 (lower is better)
Translates to: RSRLLVPPMVRKQRPPSAPRKGF*FSYWES
Trigger: GGATTCCCAGTAGGAAAATCAGAACCCTTTTCGAGG...AGCTGAAGGCGGACGTTGTTTCCTAACCATAGGTGGAACGAGGAGACGGGAGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR TCA 90 bp CAGATCACAAGCTCATCTGGCACACGGCAGAAGACGACAGCCAAAGCAAAGCCAGTCTCGAGACCAGCATaGGGTAGAAAAGACCATGCC +
Preference number: 4 (lower is better)
Translates to: QITSSSGTRQKTTAKAKPVSRPA*GRKDHA
Trigger: GGCATGGTCTTTTCTACCTCATGCTGGTCTCGAGAC...TGGCTTTGCTTTGGCTGTCGTCTTCTGCCGTGTGCCAGATGAGCTTGTGATCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR TCA 90 bp CGGCTTCCCAGATCACAAGCTCATCTGGCACACGGCAGAAGACGACAGCCAAAGAAGATTGCACGTCGATaGCAAAGAAGCACTTACGGC +
Preference number: 4 (lower is better)
Translates to: RLPRSQAHLAHGRRRQPKKIARR*QRSTYG
Trigger: GCCGTAAGTGCTTCTTTGTCATCGACGTGCAATCTT...CTTTGGCTGTCGTCTTCTGCCGTGTGCCAGATGAGCTTGTGATCTGGGAAGCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR GCA 90 bp CGCTCCCGTCTCCTCGTTCCACCTATGGTTAGGAAACAACGTCCGCCTTCAGCTGGAGGACACTTGGGATaGATCGTCCTTTTCATTCTC +
Preference number: 4 (lower is better)
Translates to: RSRLLVPPMVRKQRPPSAGGHLG*IVLFIL
Trigger: GAGAATGAAAAGGACGATGCATCCCAAGTGTCCTCC...AGCTGAAGGCGGACGTTGTTTCCTAACCATAGGTGGAACGAGGAGACGGGAGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR GCA 90 bp CGCTCCCGTCTCCTCGTTCCACCTATGGTTAGGAAACAACGTCCGCCTTCAGCTAGCAAACTTCCTTTGTaGTTGCAGCCTGGGCCTTTT +
Preference number: 4 (lower is better)
Translates to: RSRLLVPPMVRKQRPPSASKLPL*LQPGPF
Trigger: AAAAGGCCCAGGCTGCAAGCACAAAGGAAGTTTGCT...AGCTGAAGGCGGACGTTGTTTCCTAACCATAGGTGGAACGAGGAGACGGGAGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR GCA 90 bp CGCTCCCGTCTCCTCGTTCCACCTATGGTTAGGAAACAACGTCCGCCTTCAGCTTCTTTACTGGAGTTGTaGTGGGACTATTCGGCTGAG +
Preference number: 4 (lower is better)
Translates to: RSRLLVPPMVRKQRPPSASLLEL*WDYSAE
Trigger: CTCAGCCGAATAGTCCCAGCACAACTCCAGTAAAGA...AGCTGAAGGCGGACGTTGTTTCCTAACCATAGGTGGAACGAGGAGACGGGAGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR GCA 90 bp AAATCAGGCACAGGTCTCCCTCATGTGACCCCTCCAAGGCAGGCAGTCTTTTCCTTCCAAAATACACCATaGTGTTGGGCAGCGCAGGAG +
Preference number: 4 (lower is better)
Translates to: KSGTGLPHVTPPRQAVFSFQNTP*CWAAQE
Trigger: CTCCTGCGCTGCCCAACAGCATGGTGTATTTTGGAA...GGAAAAGACTGCCTGCCTTGGAGGGGTCACATGAGGGAGACCTGTGCCTGATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR GCA 90 bp CAAGCTCATCTGGCACACGGCAGAAGACGACAGCCAAAGCAAAGCCATTTCAAGGCTGTGCTTCTCCTTTaGGGGAGTGGCCTCTTTGCT +
Preference number: 4 (lower is better)
Translates to: QAHLAHGRRRQPKQSHFKAVLLL*GSGLFA
Trigger: AGCAAAGAGGCCACTCCCGCAAAGGAGAAGCACAGC...CTTGAAATGGCTTTGCTTTGGCTGTCGTCTTCTGCCGTGTGCCAGATGAGCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR GCA 90 bp TTCCTGGCAGTCACCACTGGCAAGCTCAGTGCAATATGGGTAGCTACGGGATTGTTGAGGTCAGTCACTTaGTGCATGCCGCCCATCTCA +
Preference number: 4 (lower is better)
Translates to: FLAVTTGKLSAIWVATGLLRSVT*CMPPIS
Trigger: TGAGATGGGCGGCATGCAGCAAGTGACTGACCTCAA...CAATCCCGTAGCTACCCATATTGCACTGAGCTTGCCAGTGGTGACTGCCAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR GCA 90 bp CTTCTGCAACAACAACCAACAAAGTGGATCATAGGACGTTCCTGGCAGTCACCACTTCCAGCGGCCCCTTaGGCTTCTCCAGGATCTCCT +
Preference number: 4 (lower is better)
Translates to: LLQQQPTKWIIGRSWQSPLPAAP*ASPGSP
Trigger: AGGAGATCCTGGAGAAGCGCAAGGGGCCGCTGGAAG...TGGTGACTGCCAGGAACGTCCTATGATCCACTTTGTTGGTTGTTGTTGCAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR GCA 90 bp CTTCTGCAACAACAACCAACAAAGTGGATCATAGGACGTTCCTGGCAGTCACCACTTGCCGCAGTGCACTaGCACGTGGCAGTCCTTCTC +
Preference number: 4 (lower is better)
Translates to: LLQQQPTKWIIGRSWQSPLAAVH*HVAVLL
Trigger: GAGAAGGACTGCCACGTGGCAGTGCACTGCGGCAAG...TGGTGACTGCCAGGAACGTCCTATGATCCACTTTGTTGGTTGTTGTTGCAGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR GCA 90 bp TTCCTGGCAGTCACCACTGGCAAGCTCAGTGCAATATGGGTAGCTACGGGATTGTGGGTGGTAGCAAAGTaGACGGTTTCAGACACGCTG +
Preference number: 4 (lower is better)
Translates to: FLAVTTGKLSAIWVATGLWVVAK*TVSDTL
Trigger: CAGCGTGTCTGAAACCGTGCACTTTGCTACCACCCA...CAATCCCGTAGCTACCCATATTGCACTGAGCTTGCCAGTGGTGACTGCCAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CCA 90 bp CGCTCCCGTCTCCTCGTTCCACCTATGGTTAGGAAACAACGTCCGCCTTCAGCTTTACTGGAGTTGTGCTaGGACTATTCGGCTGAGACT +
Preference number: 4 (lower is better)
Translates to: RSRLLVPPMVRKQRPPSALLELC*DYSAET
Trigger: AGTCTCAGCCGAATAGTCCCAGCACAACTCCAGTAA...AGCTGAAGGCGGACGTTGTTTCCTAACCATAGGTGGAACGAGGAGACGGGAGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CCA 90 bp CTTCTGCAACAACAACCAACAAAGTGGATCATAGGACGTTCCTGGCAGTCACCATGCGGCTTCTCCGCCTaGTGTGCCTCTTCCAGTCTC +
Preference number: 4 (lower is better)
Translates to: LLQQQPTKWIIGRSWQSPCGFSA*CASSSL
Trigger: GAGACTGGAAGAGGCACACCAGGCGGAGAAGCCGCA...TGGTGACTGCCAGGAACGTCCTATGATCCACTTTGTTGGTTGTTGTTGCAGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CCA 90 bp CTTCTGCAACAACAACCAACAAAGTGGATCATAGGACGTTCCTGGCAGTCACCAGGTCCTGGGCAGTTCTaGGGATGCGCAGCATGTCTG +
Preference number: 4 (lower is better)
Translates to: LLQQQPTKWIIGRSWQSPGPGQF*GCAACL
Trigger: CAGACATGCTGCGCATCCCCAGAACTGCCCAGGACC...TGGTGACTGCCAGGAACGTCCTATGATCCACTTTGTTGGTTGTTGTTGCAGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CCA 90 bp AGGCAGTCTTTTCCGTCTTCCTCGCTCGCTTTTCTTCTTTCCTGGAACAGATGCAAGCGGGGCAGAGGGTaGAACTTGTGGTGGTCGTTC +
Preference number: 4 (lower is better)
Translates to: RQSFPSSSLAFLLSWNRCKRGRG*NLWWSF
Trigger: GAACGACCACCACAAGTTCCACCCTCTGCCCCGCTT...GCATCTGTTCCAGGAAAGAAGAAAAGCGAGCGAGGAAGACGGAAAAGACTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CCA 90 bp AAATCAGGCACAGGTCTCCCTCATGTGACCCCTCCAAGGCAGGCAGTCTTTTCCGACGCTTCATTTCCTTaGCGGTCTCAAAGCCCATAC +
Preference number: 4 (lower is better)
Translates to: KSGTGLPHVTPPRQAVFSDASFP*RSQSPY
Trigger: GTATGGGCTTTGAGACCGCCAAGGAAATGAAGCGTC...GGAAAAGACTGCCTGCCTTGGAGGGGTCACATGAGGGAGACCTGTGCCTGATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CCA 90 bp CAGATCACAAGCTCATCTGGCACACGGCAGAAGACGACAGCCAAAGCAAAGCCATTCTGTTTCTCCACGTaGCGCAGAGCACACTCCAGA +
Preference number: 4 (lower is better)
Translates to: QITSSSGTRQKTTAKAKPFCFST*RRAHSR
Trigger: TCTGGAGTGTGCTCTGCGCCACGTGGAGAAACAGAA...TGGCTTTGCTTTGGCTGTCGTCTTCTGCCGTGTGCCAGATGAGCTTGTGATCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CCA 90 bp CGGCTTCCCAGATCACAAGCTCATCTGGCACACGGCAGAAGACGACAGCCAAAGAGCTCGAAGCACTTTTaGATGAACTGGAGGCTGACA +
Preference number: 4 (lower is better)
Translates to: RLPRSQAHLAHGRRRQPKSSKHF*MNWRLT
Trigger: TGTCAGCCTCCAGTTCATCCAAAAGTGCTTCGAGCT...CTTTGGCTGTCGTCTTCTGCCGTGTGCCAGATGAGCTTGTGATCTGGGAAGCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CCA 90 bp CCTGGCAGTCACCACTGGCAAGCTCAGTGCAATATGGGTAGCTACGGGATTGATGATCACAAGCTCATCTaGCACACGGCAGAAGACGAC +
Preference number: 4 (lower is better)
Translates to: PGSHHWQAQCNMGSYGIDDHKLI*HTAEDD
Trigger: GTCGTCTTCTGCCGTGTGCCAGATGAGCTTGTGATC...ATCAATCCCGTAGCTACCCATATTGCACTGAGCTTGCCAGTGGTGACTGCCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CCA 90 bp AGGCAGTCTTTTCCGTCTTCCTCGCTCGCTTTTCTTCTTTCCTGGAACAGATGCATAGTGATGTGCTGGTaGAGAGCCCACTCGCTCCCG +
Preference number: 4 (lower is better)
Translates to: RQSFPSSSLAFLLSWNRCIVMCW*RAHSLP
Trigger: CGGGAGCGAGTGGGCTCTCCACCAGCACATCACTAT...GCATCTGTTCCAGGAAAGAAGAAAAGCGAGCGAGGAAGACGGAAAAGACTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CCA 90 bp GGATTTCCTAATGAAATCAGGCACAGGTCTCCCTCATGTGACCCCTCCAAGGCATGCATAGTGATGTGCTaGTGGAGAGCCCACTCGCTC +
Preference number: 4 (lower is better)
Translates to: GFPNEIRHRSPSCDPSKACIVMC*WRAHSL
Trigger: GAGCGAGTGGGCTCTCCACCAGCACATCACTATGCA...TGCCTTGGAGGGGTCACATGAGGGAGACCTGTGCCTGATTTCATTAGGAAATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CCA 90 bp CCTGGCAGTCACCACTGGCAAGCTCAGTGCAATATGGGTAGCTACGGGATTGATATCATAGGACGTTCCTaGCAGTCACCACTGGCAAGC +
Preference number: 4 (lower is better)
Translates to: PGSHHWQAQCNMGSYGIDIIGRS*QSPLAS
Trigger: GCTTGCCAGTGGTGACTGCCAGGAACGTCCTATGAT...ATCAATCCCGTAGCTACCCATATTGCACTGAGCTTGCCAGTGGTGACTGCCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR TCA 90 bp ACCAACAAAGTGGATCATAGGACGTTCCTGGCAGTCACCACTGGCAAGCTCAGTTACCACCCGTTCTTCTaGCCACGGAATCCCATCACT +
Preference number: 4 (lower is better)
Translates to: TNKVDHRTFLAVTTGKLSYHPFF*PRNPIT
Trigger: AGTGATGGGATTCCGTGGTCAGAAGAACGGGTGGTA...ACTGAGCTTGCCAGTGGTGACTGCCAGGAACGTCCTATGATCCACTTTGTTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR TCA 90 bp AAATCAGGCACAGGTCTCCCTCATGTGACCCCTCCAAGGCAGGCAGTCTTTTCCACCTGCTGGAACCATTaGAAACATGCCCGTTGTGAA +
Preference number: 4 (lower is better)
Translates to: KSGTGLPHVTPPRQAVFSTCWNH*KHARCE
Trigger: TTCACAACGGGCATGTTTTCAATGGTTCCAGCAGGT...GGAAAAGACTGCCTGCCTTGGAGGGGTCACATGAGGGAGACCTGTGCCTGATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR TCA 90 bp ACCAACAAAGTGGATCATAGGACGTTCCTGGCAGTCACCACTGGCAAGCTCAGTAGCTTGTGGATGTGCTaGATCTGCGTGACAAACCGC +
Preference number: 4 (lower is better)
Translates to: TNKVDHRTFLAVTTGKLSSLWMC*ICVTNR
Trigger: GCGGTTTGTCACGCAGATTCAGCACATCCACAAGCT...ACTGAGCTTGCCAGTGGTGACTGCCAGGAACGTCCTATGATCCACTTTGTTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR TCA 90 bp CCTGGCAGTCACCACTGGCAAGCTCAGTGCAATATGGGTAGCTACGGGATTGATTCCATGGTGATGCCCTaGGATTTGAGGTGCTTCTTG +
Preference number: 4 (lower is better)
Translates to: PGSHHWQAQCNMGSYGIDSMVMP*DLRCFL
Trigger: CAAGAAGCACCTCAAATCTCAGGGCATCACCATGGA...ATCAATCCCGTAGCTACCCATATTGCACTGAGCTTGCCAGTGGTGACTGCCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR TCA 90 bp CAGATCACAAGCTCATCTGGCACACGGCAGAAGACGACAGCCAAAGCAAAGCCAACTTGTGGAAGTCATTaGGGACGCCTTTGTCCTCCT +
Preference number: 4 (lower is better)
Translates to: QITSSSGTRQKTTAKAKPTCGSH*GRLCPP
Trigger: AGGAGGACAAAGGCGTCCTCAATGACTTCCACAAGT...TGGCTTTGCTTTGGCTGTCGTCTTCTGCCGTGTGCCAGATGAGCTTGTGATCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR TCA 90 bp TGGCAAGCTCAGTGCAATATGGGTAGCTACGGGATTGATGAATCCAATTATGAAGGCACAGCACCGAGGTaGCGCAGGATGGACCCTGTG +
Preference number: 4 (lower is better)
Translates to: WQAQCNMGSYGIDESNYEGTAPR*RRMDPV
Trigger: CACAGGGTCCATCCTGCGTCACCTCGGTGCTGTGCC...TTCATAATTGGATTCATCAATCCCGTAGCTACCCATATTGCACTGAGCTTGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR TCA 90 bp ACCAACAAAGTGGATCATAGGACGTTCCTGGCAGTCACCACTGGCAAGCTCAGTGGGCTGAGATGGTACTaGGAGTGGGACCGTTTTCTT +
Preference number: 4 (lower is better)
Translates to: TNKVDHRTFLAVTTGKLSGLRWY*EWDRFL
Trigger: AAGAAAACGGTCCCACTCTCAGTACCATCTCAGCCC...ACTGAGCTTGCCAGTGGTGACTGCCAGGAACGTCCTATGATCCACTTTGTTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR TCA 90 bp AAATCAGGCACAGGTCTCCCTCATGTGACCCCTCCAAGGCAGGCAGTCTTTTCCTTGGTGTGGGTTTACTaGGACAGTTCTCAATGCTGC +
Preference number: 4 (lower is better)
Translates to: KSGTGLPHVTPPRQAVFSLVWVY*DSSQCC
Trigger: GCAGCATTGAGAACTGTCTCAGTAAACCCACACCAA...GGAAAAGACTGCCTGCCTTGGAGGGGTCACATGAGGGAGACCTGTGCCTGATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR GCA 90 bp CCTGGCAGTCACCACTGGCAAGCTCAGTGCAATATGGGTAGCTACGGGATTGATTGCACGGACTCCGGTTaGGAGGTAGAACGATTTTCA +
Preference number: 4 (lower is better)
Translates to: PGSHHWQAQCNMGSYGIDCTDSG*EVERFS
Trigger: TGAAAATCGTTCTACCTCGCAACCGGAGTCCGTGCA...ATCAATCCCGTAGCTACCCATATTGCACTGAGCTTGCCAGTGGTGACTGCCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR GCA 90 bp TTCCTGGCAGTCACCACTGGCAAGCTCAGTGCAATATGGGTAGCTACGGGATTGTGCACGGACTCCGGTTaGGAGGTAGAACGATTTTCA +
Preference number: 4 (lower is better)
Translates to: FLAVTTGKLSAIWVATGLCTDSG*EVERFS
Trigger: TGAAAATCGTTCTACCTCGCAACCGGAGTCCGTGCA...CAATCCCGTAGCTACCCATATTGCACTGAGCTTGCCAGTGGTGACTGCCAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR GCA 90 bp GGATTTCCTAATGAAATCAGGCACAGGTCTCCCTCATGTGACCCCTCCAAGGCATTGAGGTCAGTCACTTaGTGCATGCCGCCCATCTCA +
Preference number: 4 (lower is better)
Translates to: GFPNEIRHRSPSCDPSKALRSVT*CMPPIS
Trigger: TGAGATGGGCGGCATGCAGCAAGTGACTGACCTCAA...TGCCTTGGAGGGGTCACATGAGGGAGACCTGTGCCTGATTTCATTAGGAAATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR GCA 90 bp ACCAACAAAGTGGATCATAGGACGTTCCTGGCAGTCACCACTGGCAAGCTCAGTCTACTGGGAATCCACTaGCGTGAGTGTTGGTGTCCA +
Preference number: 4 (lower is better)
Translates to: TNKVDHRTFLAVTTGKLSLLGIH*RECWCP
Trigger: TGGACACCAACACTCACGGCAGTGGATTCCCAGTAG...ACTGAGCTTGCCAGTGGTGACTGCCAGGAACGTCCTATGATCCACTTTGTTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR GCA 90 bp GGATTTCCTAATGAAATCAGGCACAGGTCTCCCTCATGTGACCCCTCCAAGGCATGGGTGGTAGCAAAGTaGACGGTTTCAGACACGCTG +
Preference number: 4 (lower is better)
Translates to: GFPNEIRHRSPSCDPSKAWVVAK*TVSDTL
Trigger: CAGCGTGTCTGAAACCGTGCACTTTGCTACCACCCA...TGCCTTGGAGGGGTCACATGAGGGAGACCTGTGCCTGATTTCATTAGGAAATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR GCA 90 bp GGATTTCCTAATGAAATCAGGCACAGGTCTCCCTCATGTGACCCCTCCAAGGCACACTGGCAAGCTCAGTaGAATATGGGTAGCTACGGG +
Preference number: 4 (lower is better)
Translates to: GFPNEIRHRSPSCDPSKAHWQAQ*NMGSYG
Trigger: CCCGTAGCTACCCATATTGCACTGAGCTTGCCAGTG...TGCCTTGGAGGGGTCACATGAGGGAGACCTGTGCCTGATTTCATTAGGAAATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CCA 90 bp ACCAACAAAGTGGATCATAGGACGTTCCTGGCAGTCACCACTGGCAAGCTCAGTAATACACCATGCTGTTaGGCAGCGCAGGAGAACCTC +
Preference number: 4 (lower is better)
Translates to: TNKVDHRTFLAVTTGKLSNTPCC*AAQENL
Trigger: GAGGTTCTCCTGCGCTGCCCAACAGCATGGTGTATT...ACTGAGCTTGCCAGTGGTGACTGCCAGGAACGTCCTATGATCCACTTTGTTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CCA 90 bp CAGATCACAAGCTCATCTGGCACACGGCAGAAGACGACAGCCAAAGCAAAGCCATTCCTGGGGGTCGACTaGCATGAAGATGAAGCATTG +
Preference number: 4 (lower is better)
Translates to: QITSSSGTRQKTTAKAKPFLGVD*HEDEAL
Trigger: CAATGCTTCATCTTCATGCCAGTCGACCCCCAGGAA...TGGCTTTGCTTTGGCTGTCGTCTTCTGCCGTGTGCCAGATGAGCTTGTGATCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CCA 90 bp CAAGCTCATCTGGCACACGGCAGAAGACGACAGCCAAAGCAAAGCCATTTCAAGGGGTTTTTCCTTTCCTaGGGGTCGACTGGCATGAAG +
Preference number: 4 (lower is better)
Translates to: QAHLAHGRRRQPKQSHFKGFFLS*GSTGMK
Trigger: CTTCATGCCAGTCGACCCCCAGGAAAGGAAAAACCC...CTTGAAATGGCTTTGCTTTGGCTGTCGTCTTCTGCCGTGTGCCAGATGAGCTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CCA 90 bp GCCATAGAAACCGGACAACCACATTGGAAAACACTTGACTGTTTCTGTAATTGTGGGGCCGCTGCGGGGTaGTTAGCTGAAGCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: AIETGQPHWKTLDCFCNCGAAAG*LAEACS
Trigger: GGAGCAGGCTTCAGCTAACCACCCCGCAGCGGCCCC...ACAATTACAGAAACAGTCAAGTGTTTTCCAATGTGGTTGTCCGGTTTCTATGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CCA 90 bp GGATTTCCTAATGAAATCAGGCACAGGTCTCCCTCATGTGACCCCTCCAAGGCAAGAGGGTGGAACTTGTaGTGGTCGTTCTCTGTGTGG +
Preference number: 4 (lower is better)
Translates to: GFPNEIRHRSPSCDPSKARGWNL*WSFSVW
Trigger: CCACACAGAGAACGACCACCACAAGTTCCACCCTCT...TGCCTTGGAGGGGTCACATGAGGGAGACCTGTGCCTGATTTCATTAGGAAATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CCA 90 bp TGGCAAGCTCAGTGCAATATGGGTAGCTACGGGATTGATGAATCCAATTATGAACTGGGGGCCACGCCGTaGATGAGCCCATTCTTGGGC +
Preference number: 4 (lower is better)
Translates to: WQAQCNMGSYGIDESNYELGATP*MSPFLG
Trigger: GCCCAAGAATGGGCTCATCCACGGCGTGGCCCCCAG...TTCATAATTGGATTCATCAATCCCGTAGCTACCCATATTGCACTGAGCTTGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CCA 90 bp CTTCTGCAACAACAACCAACAAAGTGGATCATAGGACGTTCCTGGCAGTCACCACACTGCCGTGAGTGTTaGTGTCCACCTTGCCGCAGT +
Preference number: 4 (lower is better)
Translates to: LLQQQPTKWIIGRSWQSPHCREC*CPPCRS
Trigger: ACTGCGGCAAGGTGGACACCAACACTCACGGCAGTG...TGGTGACTGCCAGGAACGTCCTATGATCCACTTTGTTGGTTGTTGTTGCAGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CCA 90 bp ACCAACAAAGTGGATCATAGGACGTTCCTGGCAGTCACCACTGGCAAGCTCAGTACCCACAGCACACTTTaGACACAAAGGATCCCGGGA +
Preference number: 4 (lower is better)
Translates to: TNKVDHRTFLAVTTGKLSTHSTL*TQRIPG
Trigger: TCCCGGGATCCTTTGTGTCCAAAGTGTGCTGTGGGT...ACTGAGCTTGCCAGTGGTGACTGCCAGGAACGTCCTATGATCCACTTTGTTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CCA 90 bp ACCAACAAAGTGGATCATAGGACGTTCCTGGCAGTCACCACTGGCAAGCTCAGTTTCTGTTTCTCCACGTaGCGCAGAGCACACTCCAGA +
Preference number: 4 (lower is better)
Translates to: TNKVDHRTFLAVTTGKLSFCFST*RRAHSR
Trigger: TCTGGAGTGTGCTCTGCGCCACGTGGAGAAACAGAA...ACTGAGCTTGCCAGTGGTGACTGCCAGGAACGTCCTATGATCCACTTTGTTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR TCA 90 bp CGCTCCCGTCTCCTCGTTCCACCTATGGTTAGGAAACAACGTCCGCCTTCAGCTGTTGTTGGTGGTGGTTaGTCTTGTAATCCGACTTTT +
Preference number: 4 (lower is better)
Translates to: RSRLLVPPMVRKQRPPSAVVGGG*SCNPTF
Trigger: AAAAGTCGGATTACAAGATCAACCACCACCAACAAC...AGCTGAAGGCGGACGTTGTTTCCTAACCATAGGTGGAACGAGGAGACGGGAGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341776.7
CDS-3UTR TCA 90 bp GGATTTCCTAATGAAATCAGGCACAGGTCTCCCTCATGTGACCCCTCCAAGGCATTCCTTCTCCCGTGTTaGCCTGCTGGAACCATTGAA +
Preference number: 4 (lower is better)
Translates to: GFPNEIRHRSPSCDPSKAFLLPC*PAGTIE
Trigger: TTCAATGGTTCCAGCAGGTCAACACGGGAGAAGGAA...TGCCTTGGAGGGGTCACATGAGGGAGACCTGTGCCTGATTTCATTAGGAAATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR TCA 90 bp AGGCAGTCTTTTCCGTCTTCCTCGCTCGCTTTTCTTCTTTCCTGGAACAGATGCTGGATGGTGAAGGTCTaGCCTCGCGCATCTTTTTGG +
Preference number: 4 (lower is better)
Translates to: RQSFPSSSLAFLLSWNRCWMVKV*PRASFW
Trigger: CCAAAAAGATGCGCGAGGTCAGACCTTCACCATCCA...GCATCTGTTCCAGGAAAGAAGAAAAGCGAGCGAGGAAGACGGAAAAGACTGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR TCA 90 bp CCTGGCAGTCACCACTGGCAAGCTCAGTGCAATATGGGTAGCTACGGGATTGATAAGATTGCACGTCGATaGCAAAGAAGCACTTACGGC +
Preference number: 4 (lower is better)
Translates to: PGSHHWQAQCNMGSYGIDKIARR*QRSTYG
Trigger: GCCGTAAGTGCTTCTTTGTCATCGACGTGCAATCTT...ATCAATCCCGTAGCTACCCATATTGCACTGAGCTTGCCAGTGGTGACTGCCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR GCA 90 bp CCTGGCAGTCACCACTGGCAAGCTCAGTGCAATATGGGTAGCTACGGGATTGATGGAGGACACTTGGGATaGATCGTCCTTTTCATTCTC +
Preference number: 4 (lower is better)
Translates to: PGSHHWQAQCNMGSYGIDGGHLG*IVLFIL
Trigger: GAGAATGAAAAGGACGATGCATCCCAAGTGTCCTCC...ATCAATCCCGTAGCTACCCATATTGCACTGAGCTTGCCAGTGGTGACTGCCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR GCA 90 bp CTTCTGCAACAACAACCAACAAAGTGGATCATAGGACGTTCCTGGCAGTCACCAGCTGTGCTTCTCCTTTaGGGGAGTGGCCTCTTTGCT +
Preference number: 4 (lower is better)
Translates to: LLQQQPTKWIIGRSWQSPAVLLL*GSGLFA
Trigger: AGCAAAGAGGCCACTCCCGCAAAGGAGAAGCACAGC...TGGTGACTGCCAGGAACGTCCTATGATCCACTTTGTTGGTTGTTGTTGCAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR GCA 90 bp TGGCAAGCTCAGTGCAATATGGGTAGCTACGGGATTGATGAATCCAATTATGAATGGTTAGCTGAAGCCTaGTCCCGGCGGCTGTCAGCC +
Preference number: 4 (lower is better)
Translates to: WQAQCNMGSYGIDESNYEWLAEA*SRRLSA
Trigger: GGCTGACAGCCGCCGGGAGCAGGCTTCAGCTAACCA...TTCATAATTGGATTCATCAATCCCGTAGCTACCCATATTGCACTGAGCTTGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR GCA 90 bp GCCATAGAAACCGGACAACCACATTGGAAAACACTTGACTGTTTCTGTAATTGTCGCCCTTCTCGGCCTTaGCCGAGTCCTGCGGCTTGT +
Preference number: 4 (lower is better)
Translates to: AIETGQPHWKTLDCFCNCRPSRP*PSPAAC
Trigger: ACAAGCCGCAGGACTCGGGCAAGGCCGAGAAGGGCG...ACAATTACAGAAACAGTCAAGTGTTTTCCAATGTGGTTGTCCGGTTTCTATGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR GCA 90 bp ACCAACAAAGTGGATCATAGGACGTTCCTGGCAGTCACCACTGGCAAGCTCAGTAGGTCAGTCACTTGCTaGATGCCGCCCATCTCATTA +
Preference number: 4 (lower is better)
Translates to: TNKVDHRTFLAVTTGKLSRSVTC*MPPISL
Trigger: TAATGAGATGGGCGGCATGCAGCAAGTGACTGACCT...ACTGAGCTTGCCAGTGGTGACTGCCAGGAACGTCCTATGATCCACTTTGTTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR GCA 90 bp CGGCTTCCCAGATCACAAGCTCATCTGGCACACGGCAGAAGACGACAGCCAAAGGAATGCAATACCAAATaGAGTCAGCACCAGTGTGTA +
Preference number: 4 (lower is better)
Translates to: RLPRSQAHLAHGRRRQPKECNTK*SQHQCV
Trigger: TACACACTGGTGCTGACTGCATTTGGTATTGCATTC...CTTTGGCTGTCGTCTTCTGCCGTGTGCCAGATGAGCTTGTGATCTGGGAAGCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR GCA 90 bp GCCATAGAAACCGGACAACCACATTGGAAAACACTTGACTGTTTCTGTAATTGTCCAGCCTCGAACAGCTaGCTGCGCTGCCGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: AIETGQPHWKTLDCFCNCPASNS*LRCRSS
Trigger: AGAGCTGCGGCAGCGCAGGCAGCTGTTCGAGGCTGG...ACAATTACAGAAACAGTCAAGTGTTTTCCAATGTGGTTGTCCGGTTTCTATGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CCA 90 bp CAGATCACAAGCTCATCTGGCACACGGCAGAAGACGACAGCCAAAGCAAAGCCAGCATGCTGCCTCTTCTaGGAATTCTTGAACTCCTTC +
Preference number: 4 (lower is better)
Translates to: QITSSSGTRQKTTAKAKPACCLF*EFLNSF
Trigger: GAAGGAGTTCAAGAATTCCCAGAAGAGGCAGCATGC...TGGCTTTGCTTTGGCTGTCGTCTTCTGCCGTGTGCCAGATGAGCTTGTGATCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CCA 90 bp AGGCAGTCTTTTCCGTCTTCCTCGCTCGCTTTTCTTCTTTCCTGGAACAGATGCAATACACCATGCTGTTaGGCAGCGCAGGAGAACCTC +
Preference number: 4 (lower is better)
Translates to: RQSFPSSSLAFLLSWNRCNTPCC*AAQENL
Trigger: GAGGTTCTCCTGCGCTGCCCAACAGCATGGTGTATT...GCATCTGTTCCAGGAAAGAAGAAAAGCGAGCGAGGAAGACGGAAAAGACTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CCA 90 bp CCTGGCAGTCACCACTGGCAAGCTCAGTGCAATATGGGTAGCTACGGGATTGATTCTCCTTTGCGGGAGTaGCCTCTTTGCTTTTGTGTT +
Preference number: 4 (lower is better)
Translates to: PGSHHWQAQCNMGSYGIDSPLRE*PLCFCV
Trigger: AACACAAAAGCAAAGAGGCCACTCCCGCAAAGGAGA...ATCAATCCCGTAGCTACCCATATTGCACTGAGCTTGCCAGTGGTGACTGCCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CCA 90 bp AGGCAGTCTTTTCCGTCTTCCTCGCTCGCTTTTCTTCTTTCCTGGAACAGATGCTTCCCTGAGATTGTGTaGTTGACAGCGGAACTGGGC +
Preference number: 4 (lower is better)
Translates to: RQSFPSSSLAFLLSWNRCFPEIV*LTAELG
Trigger: GCCCAGTTCCGCTGTCAACCACACAATCTCAGGGAA...GCATCTGTTCCAGGAAAGAAGAAAAGCGAGCGAGGAAGACGGAAAAGACTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CCA 90 bp GCCATAGAAACCGGACAACCACATTGGAAAACACTTGACTGTTTCTGTAATTGTTTGGCCAGCCGGTCCTaGGCAGTTCTGGGGATGCGC +
Preference number: 4 (lower is better)
Translates to: AIETGQPHWKTLDCFCNCLASRS*AVLGMR
Trigger: GCGCATCCCCAGAACTGCCCAGGACCGGCTGGCCAA...ACAATTACAGAAACAGTCAAGTGTTTTCCAATGTGGTTGTCCGGTTTCTATGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CCA 90 bp CAAGCTCATCTGGCACACGGCAGAAGACGACAGCCAAAGCAAAGCCATTTCAAGGACGCTTCATTTCCTTaGCGGTCTCAAAGCCCATAC +
Preference number: 4 (lower is better)
Translates to: QAHLAHGRRRQPKQSHFKDASFP*RSQSPY
Trigger: GTATGGGCTTTGAGACCGCCAAGGAAATGAAGCGTC...CTTGAAATGGCTTTGCTTTGGCTGTCGTCTTCTGCCGTGTGCCAGATGAGCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CCA 90 bp ACCAACAAAGTGGATCATAGGACGTTCCTGGCAGTCACCACTGGCAAGCTCAGTGCGGGGACCTCTTTTTaGTGTGGGTTTACTGAGACA +
Preference number: 4 (lower is better)
Translates to: TNKVDHRTFLAVTTGKLSAGTSF*CGFTET
Trigger: TGTCTCAGTAAACCCACACCAAAAAGAGGTCCCCGC...ACTGAGCTTGCCAGTGGTGACTGCCAGGAACGTCCTATGATCCACTTTGTTGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CCA 90 bp CAAGCTCATCTGGCACACGGCAGAAGACGACAGCCAAAGCAAAGCCATTTCAAGGCGGGGACCTCTTTTTaGTGTGGGTTTACTGAGACA +
Preference number: 4 (lower is better)
Translates to: QAHLAHGRRRQPKQSHFKAGTSF*CGFTET
Trigger: TGTCTCAGTAAACCCACACCAAAAAGAGGTCCCCGC...CTTGAAATGGCTTTGCTTTGGCTGTCGTCTTCTGCCGTGTGCCAGATGAGCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CCA 90 bp AGGCAGTCTTTTCCGTCTTCCTCGCTCGCTTTTCTTCTTTCCTGGAACAGATGCCACTTTTGGATGAACTaGAGGCTGACAGACGGGAGG +
Preference number: 4 (lower is better)
Translates to: RQSFPSSSLAFLLSWNRCHFWMN*RLTDGR
Trigger: CCTCCCGTCTGTCAGCCTCCAGTTCATCCAAAAGTG...GCATCTGTTCCAGGAAAGAAGAAAAGCGAGCGAGGAAGACGGAAAAGACTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CCA 90 bp AGGCAGTCTTTTCCGTCTTCCTCGCTCGCTTTTCTTCTTTCCTGGAACAGATGCATCGACCACGGGCGTTaGCATCTTCATGATGAGCTC +
Preference number: 4 (lower is better)
Translates to: RQSFPSSSLAFLLSWNRCIDHGR*HLHDEL
Trigger: GAGCTCATCATGAAGATGCCAACGCCCGTGGTCGAT...GCATCTGTTCCAGGAAAGAAGAAAAGCGAGCGAGGAAGACGGAAAAGACTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CCA 90 bp GGATTTCCTAATGAAATCAGGCACAGGTCTCCCTCATGTGACCCCTCCAAGGCATCCTCGTTCCACCTATaGTTAGGAAACAACGTCCGC +
Preference number: 4 (lower is better)
Translates to: GFPNEIRHRSPSCDPSKASSFHL*LGNNVR
Trigger: GCGGACGTTGTTTCCTAACCATAGGTGGAACGAGGA...TGCCTTGGAGGGGTCACATGAGGGAGACCTGTGCCTGATTTCATTAGGAAATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CCA 90 bp CAAGCTCATCTGGCACACGGCAGAAGACGACAGCCAAAGCAAAGCCATTTCAAGTCCTCGTTCCACCTATaGTTAGGAAACAACGTCCGC +
Preference number: 4 (lower is better)
Translates to: QAHLAHGRRRQPKQSHFKSSFHL*LGNNVR
Trigger: GCGGACGTTGTTTCCTAACCATAGGTGGAACGAGGA...CTTGAAATGGCTTTGCTTTGGCTGTCGTCTTCTGCCGTGTGCCAGATGAGCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR TCA 90 bp TTCCTGGCAGTCACCACTGGCAAGCTCAGTGCAATATGGGTAGCTACGGGATTGTACATCAGCGAAACGTaGAGGTCCTTAGTGTCTGAT +
Preference number: 4 (lower is better)
Translates to: FLAVTTGKLSAIWVATGLYISET*RSLVSD
Trigger: ATCAGACACTAAGGACCTTCACGTTTCGCTGATGTA...CAATCCCGTAGCTACCCATATTGCACTGAGCTTGCCAGTGGTGACTGCCAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341776.7
CDS-3UTR TCA 90 bp CAAGCTCATCTGGCACACGGCAGAAGACGACAGCCAAAGCAAAGCCATTTCAAGCCTTTTAGAGAGGTCTaGTATCTGAGTAGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: QAHLAHGRRRQPKQSHFKPFREV*YLSSWR
Trigger: CCTCCAGCTACTCAGATATCAGACCTCTCTAAAAGG...CTTGAAATGGCTTTGCTTTGGCTGTCGTCTTCTGCCGTGTGCCAGATGAGCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR TCA 90 bp GGATTTCCTAATGAAATCAGGCACAGGTCTCCCTCATGTGACCCCTCCAAGGCACCTTTTAGAGAGGTCTaGTATCTGAGTAGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: GFPNEIRHRSPSCDPSKAPFREV*YLSSWR
Trigger: CCTCCAGCTACTCAGATATCAGACCTCTCTAAAAGG...TGCCTTGGAGGGGTCACATGAGGGAGACCTGTGCCTGATTTCATTAGGAAATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR TCA 90 bp TTCCTGGCAGTCACCACTGGCAAGCTCAGTGCAATATGGGTAGCTACGGGATTGACTTTCAGTTTTCCCTaGGATTGTGTGGTTGACAGC +
Preference number: 4 (lower is better)
Translates to: FLAVTTGKLSAIWVATGLTFSFP*DCVVDS
Trigger: GCTGTCAACCACACAATCTCAGGGAAAACTGAAAGT...CAATCCCGTAGCTACCCATATTGCACTGAGCTTGCCAGTGGTGACTGCCAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR TCA 90 bp AGGCAGTCTTTTCCGTCTTCCTCGCTCGCTTTTCTTCTTTCCTGGAACAGATGCTCCATGGTGATGCCCTaGGATTTGAGGTGCTTCTTG +
Preference number: 4 (lower is better)
Translates to: RQSFPSSSLAFLLSWNRCSMVMP*DLRCFL
Trigger: CAAGAAGCACCTCAAATCTCAGGGCATCACCATGGA...GCATCTGTTCCAGGAAAGAAGAAAAGCGAGCGAGGAAGACGGAAAAGACTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR TCA 90 bp CAAGCTCATCTGGCACACGGCAGAAGACGACAGCCAAAGCAAAGCCATTTCAAGCCTCGAAAAGGGTTCTaGTTTTCCTACTGGGAATCC +
Preference number: 4 (lower is better)
Translates to: QAHLAHGRRRQPKQSHFKPRKGF*FSYWES
Trigger: GGATTCCCAGTAGGAAAATCAGAACCCTTTTCGAGG...CTTGAAATGGCTTTGCTTTGGCTGTCGTCTTCTGCCGTGTGCCAGATGAGCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR TCA 90 bp CCTGGCAGTCACCACTGGCAAGCTCAGTGCAATATGGGTAGCTACGGGATTGATTCAATGTATGGAAGGTaGTTTTGGTCTCGAGACCAG +
Preference number: 4 (lower is better)
Translates to: PGSHHWQAQCNMGSYGIDSMYGR*FWSRDQ
Trigger: CTGGTCTCGAGACCAAAATCACCTTCCATACATTGA...ATCAATCCCGTAGCTACCCATATTGCACTGAGCTTGCCAGTGGTGACTGCCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR TCA 90 bp CAGATCACAAGCTCATCTGGCACACGGCAGAAGACGACAGCCAAAGCAAAGCCAACTTTGCCGCAGATCTaGTTGACCAGACTGATAATC +
Preference number: 4 (lower is better)
Translates to: QITSSSGTRQKTTAKAKPTLPQI*LTRLII
Trigger: GATTATCAGTCTGGTCAATCAGATCTGCGGCAAAGT...TGGCTTTGCTTTGGCTGTCGTCTTCTGCCGTGTGCCAGATGAGCTTGTGATCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR TCA 90 bp CGGCTTCCCAGATCACAAGCTCATCTGGCACACGGCAGAAGACGACAGCCAAAGGCAGTTTCCAAAATCTaGCTGCAGTATCTAGGTTTT +
Preference number: 4 (lower is better)
Translates to: RLPRSQAHLAHGRRRQPKAVSKI*LQYLGF
Trigger: AAAACCTAGATACTGCAGTCAGATTTTGGAAACTGC...CTTTGGCTGTCGTCTTCTGCCGTGTGCCAGATGAGCTTGTGATCTGGGAAGCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR TCA 90 bp CGCTCCCGTCTCCTCGTTCCACCTATGGTTAGGAAACAACGTCCGCCTTCAGCTGGGTTTTTAAAACAGTaGCTATACGGCAGTTTCCAA +
Preference number: 4 (lower is better)
Translates to: RSRLLVPPMVRKQRPPSAGFLKQ*LYGSFQ
Trigger: TTGGAAACTGCCGTATAGTCACTGTTTTAAAAACCC...AGCTGAAGGCGGACGTTGTTTCCTAACCATAGGTGGAACGAGGAGACGGGAGCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR GCA 90 bp AGGCAGTCTTTTCCGTCTTCCTCGCTCGCTTTTCTTCTTTCCTGGAACAGATGCAACTTCCTTTGTGCTTaGAGCCTGGGCCTTTTCCTC +
Preference number: 4 (lower is better)
Translates to: RQSFPSSSLAFLLSWNRCNFLCA*SLGLFL
Trigger: GAGGAAAAGGCCCAGGCTGCAAGCACAAAGGAAGTT...GCATCTGTTCCAGGAAAGAAGAAAAGCGAGCGAGGAAGACGGAAAAGACTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR GCA 90 bp CAAGCTCATCTGGCACACGGCAGAAGACGACAGCCAAAGCAAAGCCATTTCAAGAGCAAACTTCCTTTGTaGTTGCAGCCTGGGCCTTTT +
Preference number: 4 (lower is better)
Translates to: QAHLAHGRRRQPKQSHFKSKLPL*LQPGPF
Trigger: AAAAGGCCCAGGCTGCAAGCACAAAGGAAGTTTGCT...CTTGAAATGGCTTTGCTTTGGCTGTCGTCTTCTGCCGTGTGCCAGATGAGCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR GCA 90 bp ACCAACAAAGTGGATCATAGGACGTTCCTGGCAGTCACCACTGGCAAGCTCAGTTCTTTACTGGAGTTGTaGTGGGACTATTCGGCTGAG +
Preference number: 4 (lower is better)
Translates to: TNKVDHRTFLAVTTGKLSSLLEL*WDYSAE
Trigger: CTCAGCCGAATAGTCCCAGCACAACTCCAGTAAAGA...ACTGAGCTTGCCAGTGGTGACTGCCAGGAACGTCCTATGATCCACTTTGTTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR GCA 90 bp GGATTTCCTAATGAAATCAGGCACAGGTCTCCCTCATGTGACCCCTCCAAGGCAGGGATAGCACCTGTTTaGGGGTTTTTGCATTGCTAC +
Preference number: 4 (lower is better)
Translates to: GFPNEIRHRSPSCDPSKAGIAPV*GFLHCY
Trigger: GTAGCAATGCAAAAACCCGCAAACAGGTGCTATCCC...TGCCTTGGAGGGGTCACATGAGGGAGACCTGTGCCTGATTTCATTAGGAAATCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR GCA 90 bp TGGCAAGCTCAGTGCAATATGGGTAGCTACGGGATTGATGAATCCAATTATGAAGTCCGCCTTGCCATGTaGTTGTCTGCCTGGCGTGCT +
Preference number: 4 (lower is better)
Translates to: WQAQCNMGSYGIDESNYEVRLAM*LSAWRA
Trigger: AGCACGCCAGGCAGACAAGCACATGGCAAGGCGGAC...TTCATAATTGGATTCATCAATCCCGTAGCTACCCATATTGCACTGAGCTTGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR GCA 90 bp GCCATAGAAACCGGACAACCACATTGGAAAACACTTGACTGTTTCTGTAATTGTGAGTCCTGCGGCTTGTaGACGGACTCCGGTTGCGAG +
Preference number: 4 (lower is better)
Translates to: AIETGQPHWKTLDCFCNCESCGL*TDSGCE
Trigger: CTCGCAACCGGAGTCCGTGCACAAGCCGCAGGACTC...ACAATTACAGAAACAGTCAAGTGTTTTCCAATGTGGTTGTCCGGTTTCTATGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR GCA 90 bp CAAGCTCATCTGGCACACGGCAGAAGACGACAGCCAAAGCAAAGCCATTTCAAGCCTCCTCAGCAGGAATaGAATACCAAATGCAGTCAG +
Preference number: 4 (lower is better)
Translates to: QAHLAHGRRRQPKQSHFKPPQQE*NTKCSQ
Trigger: CTGACTGCATTTGGTATTGCATTCCTGCTGAGGAGG...CTTGAAATGGCTTTGCTTTGGCTGTCGTCTTCTGCCGTGTGCCAGATGAGCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR GCA 90 bp AGGCAGTCTTTTCCGTCTTCCTCGCTCGCTTTTCTTCTTTCCTGGAACAGATGCTCTGACGTCTCCAACTaGAGCCACTTTCGAGGCTTT +
Preference number: 4 (lower is better)
Translates to: RQSFPSSSLAFLLSWNRCSDVSN*SHFRGF
Trigger: AAAGCCTCGAAAGTGGCTGCAGTTGGAGACGTCAGA...GCATCTGTTCCAGGAAAGAAGAAAAGCGAGCGAGGAAGACGGAAAAGACTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR GCA 90 bp AAATCAGGCACAGGTCTCCCTCATGTGACCCCTCCAAGGCAGGCAGTCTTTTCCGACAGTTCTCAATGCTaGCGTTTTTACCAGACACTT +
Preference number: 4 (lower is better)
Translates to: KSGTGLPHVTPPRQAVFSDSSQC*RFYQTL
Trigger: AAGTGTCTGGTAAAAACGGCAGCATTGAGAACTGTC...GGAAAAGACTGCCTGCCTTGGAGGGGTCACATGAGGGAGACCTGTGCCTGATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR GCA 90 bp CAAGCTCATCTGGCACACGGCAGAAGACGACAGCCAAAGCAAAGCCATTTCAAGCTTTCCTGGAACAGATaGATAGTGATGTGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: QAHLAHGRRRQPKQSHFKLSWNR*IVMCWW
Trigger: CCACCAGCACATCACTATGCATCTGTTCCAGGAAAG...CTTGAAATGGCTTTGCTTTGGCTGTCGTCTTCTGCCGTGTGCCAGATGAGCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CCA 90 bp GGATTTCCTAATGAAATCAGGCACAGGTCTCCCTCATGTGACCCCTCCAAGGCAGCATGCTGCCTCTTCTaGGAATTCTTGAACTCCTTC +
Preference number: 4 (lower is better)
Translates to: GFPNEIRHRSPSCDPSKAACCLF*EFLNSF
Trigger: GAAGGAGTTCAAGAATTCCCAGAAGAGGCAGCATGC...TGCCTTGGAGGGGTCACATGAGGGAGACCTGTGCCTGATTTCATTAGGAAATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CCA 90 bp CAAGCTCATCTGGCACACGGCAGAAGACGACAGCCAAAGCAAAGCCATTTCAAGCCTAATCCCTTAGACTaGTCATTACCAAGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: QAHLAHGRRRQPKQSHFKPNPLD*SLPRSP
Trigger: TGGGCTCCTTGGTAATGACCAGTCTAAGGGATTAGG...CTTGAAATGGCTTTGCTTTGGCTGTCGTCTTCTGCCGTGTGCCAGATGAGCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CCA 90 bp CAAGCTCATCTGGCACACGGCAGAAGACGACAGCCAAAGCAAAGCCATTTCAAGTCTCCTTTGCGGGAGTaGCCTCTTTGCTTTTGTGTT +
Preference number: 4 (lower is better)
Translates to: QAHLAHGRRRQPKQSHFKSPLRE*PLCFCV
Trigger: AACACAAAAGCAAAGAGGCCACTCCCGCAAAGGAGA...CTTGAAATGGCTTTGCTTTGGCTGTCGTCTTCTGCCGTGTGCCAGATGAGCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CCA 90 bp AGGCAGTCTTTTCCGTCTTCCTCGCTCGCTTTTCTTCTTTCCTGGAACAGATGCGCATCTTTTTGGCACTaGTTACACCTGCACCCAGAG +
Preference number: 4 (lower is better)
Translates to: RQSFPSSSLAFLLSWNRCASFWH*LHLHPE
Trigger: CTCTGGGTGCAGGTGTAACCAGTGCCAAAAAGATGC...GCATCTGTTCCAGGAAAGAAGAAAAGCGAGCGAGGAAGACGGAAAAGACTGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CCA 90 bp TGGCAAGCTCAGTGCAATATGGGTAGCTACGGGATTGATGAATCCAATTATGAACTTCCAGTCTCCTCTTaGAGTTCCGCAGCCCCTCCC +
Preference number: 4 (lower is better)
Translates to: WQAQCNMGSYGIDESNYELPVSS*SSAAPP
Trigger: GGGAGGGGCTGCGGAACTCCAAGAGGAGACTGGAAG...TTCATAATTGGATTCATCAATCCCGTAGCTACCCATATTGCACTGAGCTTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CCA 90 bp CTTCTGCAACAACAACCAACAAAGTGGATCATAGGACGTTCCTGGCAGTCACCAAGAGGGTGGAACTTGTaGTGGTCGTTCTCTGTGTGG +
Preference number: 4 (lower is better)
Translates to: LLQQQPTKWIIGRSWQSPRGWNL*WSFSVW
Trigger: CCACACAGAGAACGACCACCACAAGTTCCACCCTCT...TGGTGACTGCCAGGAACGTCCTATGATCCACTTTGTTGGTTGTTGTTGCAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CCA 90 bp GCTCAGTGCAATATGGGTAGCTACGGGATTGATGAATCCAATTATGAAACAAAGCGGCCAGTCTTCAACTaGGCCTGGCCCACCTCCTTG +
Preference number: 4 (lower is better)
Translates to: AQCNMGSYGIDESNYETKRPVFN*AWPTSL
Trigger: CAAGGAGGTGGGCCAGGCCCAGTTGAAGACTGGCCG...CTTTGTTTCATAATTGGATTCATCAATCCCGTAGCTACCCATATTGCACTGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CCA 90 bp CTTCTGCAACAACAACCAACAAAGTGGATCATAGGACGTTCCTGGCAGTCACCACACTTTTGGATGAACTaGAGGCTGACAGACGGGAGG +
Preference number: 4 (lower is better)
Translates to: LLQQQPTKWIIGRSWQSPHFWMN*RLTDGR
Trigger: CCTCCCGTCTGTCAGCCTCCAGTTCATCCAAAAGTG...TGGTGACTGCCAGGAACGTCCTATGATCCACTTTGTTGGTTGTTGTTGCAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CCA 90 bp CCTGGCAGTCACCACTGGCAAGCTCAGTGCAATATGGGTAGCTACGGGATTGATAAGCTCAGTGCAATATaGGTAGCTACGGGATTGATG +
Preference number: 4 (lower is better)
Translates to: PGSHHWQAQCNMGSYGIDKLSAI*VATGLM
Trigger: CATCAATCCCGTAGCTACCCATATTGCACTGAGCTT...ATCAATCCCGTAGCTACCCATATTGCACTGAGCTTGCCAGTGGTGACTGCCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CCA 90 bp AAATCAGGCACAGGTCTCCCTCATGTGACCCCTCCAAGGCAGGCAGTCTTTTCCACCGGACAACCACATTaGAAAACACTTGACTGTTTC +
Preference number: 4 (lower is better)
Translates to: KSGTGLPHVTPPRQAVFSTGQPH*KTLDCF
Trigger: GAAACAGTCAAGTGTTTTCCAATGTGGTTGTCCGGT...GGAAAAGACTGCCTGCCTTGGAGGGGTCACATGAGGGAGACCTGTGCCTGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR TCA 90 bp ACCAACAAAGTGGATCATAGGACGTTCCTGGCAGTCACCACTGGCAAGCTCAGTTGTTGGTGGCTGTTTTaGCGTCTTCTGTCTCATCAT +
Preference number: 4 (lower is better)
Translates to: TNKVDHRTFLAVTTGKLSCWWLF*RLLSHH
Trigger: ATGATGAGACAGAAGACGTCAAAACAGCCACCAACA...ACTGAGCTTGCCAGTGGTGACTGCCAGGAACGTCCTATGATCCACTTTGTTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR TCA 90 bp CCTGGCAGTCACCACTGGCAAGCTCAGTGCAATATGGGTAGCTACGGGATTGATTTGCTTTTGTGTTTTTaGACAGGTTCCTTCTCCCGT +
Preference number: 4 (lower is better)
Translates to: PGSHHWQAQCNMGSYGIDLLLCF*TGSFSR
Trigger: ACGGGAGAAGGAACCTGTTCAAAAACACAAAAGCAA...ATCAATCCCGTAGCTACCCATATTGCACTGAGCTTGCCAGTGGTGACTGCCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR TCA 90 bp CTTCTGCAACAACAACCAACAAAGTGGATCATAGGACGTTCCTGGCAGTCACCATGGGTTTGGTGTCCTTaGCCAGTTCTCTCTTGGCTT +
Preference number: 4 (lower is better)
Translates to: LLQQQPTKWIIGRSWQSPWVWCP*PVLSWL
Trigger: AAGCCAAGAGAGAACTGGTCAAGGACACCAAACCCA...TGGTGACTGCCAGGAACGTCCTATGATCCACTTTGTTGGTTGTTGTTGCAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR TCA 90 bp TTGTTAAATATTCCAAAACAGTTCAGTCTTCTGCAACAACAACCAACAAAGTGGCCTTGGCGGAGGGCCTaGGGACGGGGATCTCGTCCA +
Preference number: 4 (lower is better)
Translates to: LLNIPKQFSLLQQQPTKWPWRRA*GRGSRP
Trigger: TGGACGAGATCCCCGTCCTCAGGCCCTCCGCCAAGG...CCACTTTGTTGGTTGTTGTTGCAGAAGACTGAACTGTTTTGGAATATTTAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR TCA 90 bp TGGCAAGCTCAGTGCAATATGGGTAGCTACGGGATTGATGAATCCAATTATGAACGGTCCTGTGCACCTTaGTCCCCTCTTTGCACAGCA +
Preference number: 4 (lower is better)
Translates to: WQAQCNMGSYGIDESNYERSCAP*SPLCTA
Trigger: TGCTGTGCAAAGAGGGGATCAAGGTGCACAGGACCG...TTCATAATTGGATTCATCAATCCCGTAGCTACCCATATTGCACTGAGCTTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR TCA 90 bp TGGCAAGCTCAGTGCAATATGGGTAGCTACGGGATTGATGAATCCAATTATGAACTGACACCTCCTCTCTaGCGTCTCCAACTGCAGCCA +
Preference number: 4 (lower is better)
Translates to: WQAQCNMGSYGIDESNYELTPPL*RLQLQP
Trigger: TGGCTGCAGTTGGAGACGTCAGAGAGGAGGTGTCAG...TTCATAATTGGATTCATCAATCCCGTAGCTACCCATATTGCACTGAGCTTGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR TCA 90 bp AGGCAGTCTTTTCCGTCTTCCTCGCTCGCTTTTCTTCTTTCCTGGAACAGATGCTTGGTGTGGGTTTACTaGGACAGTTCTCAATGCTGC +
Preference number: 4 (lower is better)
Translates to: RQSFPSSSLAFLLSWNRCLVWVY*DSSQCC
Trigger: GCAGCATTGAGAACTGTCTCAGTAAACCCACACCAA...GCATCTGTTCCAGGAAAGAAGAAAAGCGAGCGAGGAAGACGGAAAAGACTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR TCA 90 bp ACCAACAAAGTGGATCATAGGACGTTCCTGGCAGTCACCACTGGCAAGCTCAGTAGTGCAAAGACAGCTTaGATCCTACAGCAAGTACTC +
Preference number: 4 (lower is better)
Translates to: TNKVDHRTFLAVTTGKLSSAKTA*ILQQVL
Trigger: GAGTACTTGCTGTAGGATTCAAGCTGTCTTTGCACT...ACTGAGCTTGCCAGTGGTGACTGCCAGGAACGTCCTATGATCCACTTTGTTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR GCA 90 bp GGATTTCCTAATGAAATCAGGCACAGGTCTCCCTCATGTGACCCCTCCAAGGCACGGGAGTGGCCTCTTTaGTTTTGTGTTTTTGAACAG +
Preference number: 4 (lower is better)
Translates to: GFPNEIRHRSPSCDPSKAREWPL*FCVFEQ
Trigger: CTGTTCAAAAACACAAAAGCAAAGAGGCCACTCCCG...TGCCTTGGAGGGGTCACATGAGGGAGACCTGTGCCTGATTTCATTAGGAAATCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR GCA 90 bp GCCATAGAAACCGGACAACCACATTGGAAAACACTTGACTGTTTCTGTAATTGTTGCTGCCATCGTGGCTaGCATAGCGTGCGGAGGAGT +
Preference number: 4 (lower is better)
Translates to: AIETGQPHWKTLDCFCNCCCHRG*HSVRRS
Trigger: ACTCCTCCGCACGCTATGGCAGCCACGATGGCAGCA...ACAATTACAGAAACAGTCAAGTGTTTTCCAATGTGGTTGTCCGGTTTCTATGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR GCA 90 bp TGGCAAGCTCAGTGCAATATGGGTAGCTACGGGATTGATGAATCCAATTATGAAGAAACAAAACGGGGGTaGCCCGGCTTCCCAGATCAC +
Preference number: 4 (lower is better)
Translates to: WQAQCNMGSYGIDESNYEETKRG*PGFPDH
Trigger: GTGATCTGGGAAGCCGGGGCACCCCCGTTTTGTTTC...TTCATAATTGGATTCATCAATCCCGTAGCTACCCATATTGCACTGAGCTTGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR GCA 90 bp AGGCAGTCTTTTCCGTCTTCCTCGCTCGCTTTTCTTCTTTCCTGGAACAGATGCCTTTCCTGGAACAGATaGATAGTGATGTGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: RQSFPSSSLAFLLSWNRCLSWNR*IVMCWW
Trigger: CCACCAGCACATCACTATGCATCTGTTCCAGGAAAG...GCATCTGTTCCAGGAAAGAAGAAAAGCGAGCGAGGAAGACGGAAAAGACTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR GCA 90 bp CCTGGCAGTCACCACTGGCAAGCTCAGTGCAATATGGGTAGCTACGGGATTGATACATTCAAAAATAACTaGAGGCCTCCTAGTGGCTCT +
Preference number: 4 (lower is better)
Translates to: PGSHHWQAQCNMGSYGIDTFKNN*RPPSGS
Trigger: AGAGCCACTAGGAGGCCTGCAGTTATTTTTGAATGT...ATCAATCCCGTAGCTACCCATATTGCACTGAGCTTGCCAGTGGTGACTGCCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR GCA 90 bp CGCTCCCGTCTCCTCGTTCCACCTATGGTTAGGAAACAACGTCCGCCTTCAGCTAACAGTTCAGTCTTCTaGAACAACAACCAACAAAGT +
Preference number: 4 (lower is better)
Translates to: RSRLLVPPMVRKQRPPSANSSVF*NNNQQS
Trigger: ACTTTGTTGGTTGTTGTTGCAGAAGACTGAACTGTT...AGCTGAAGGCGGACGTTGTTTCCTAACCATAGGTGGAACGAGGAGACGGGAGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CCA 90 bp AGGCAGTCTTTTCCGTCTTCCTCGCTCGCTTTTCTTCTTTCCTGGAACAGATGCTTACTGGAGTTGTGCTaGGACTATTCGGCTGAGACT +
Preference number: 4 (lower is better)
Translates to: RQSFPSSSLAFLLSWNRCLLELC*DYSAET
Trigger: AGTCTCAGCCGAATAGTCCCAGCACAACTCCAGTAA...GCATCTGTTCCAGGAAAGAAGAAAAGCGAGCGAGGAAGACGGAAAAGACTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CCA 90 bp CAGATCACAAGCTCATCTGGCACACGGCAGAAGACGACAGCCAAAGCAAAGCCACTCCACTATCTTTACTaGAGTTGTGCTGGGACTATT +
Preference number: 4 (lower is better)
Translates to: QITSSSGTRQKTTAKAKPLHYLY*SCAGTI
Trigger: AATAGTCCCAGCACAACTCCAGTAAAGATAGTGGAG...TGGCTTTGCTTTGGCTGTCGTCTTCTGCCGTGTGCCAGATGAGCTTGTGATCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CCA 90 bp AGGCAGTCTTTTCCGTCTTCCTCGCTCGCTTTTCTTCTTTCCTGGAACAGATGCCTTCTCCATGGAGAATaGCTTAGCTATATGGCGACG +
Preference number: 4 (lower is better)
Translates to: RQSFPSSSLAFLLSWNRCLLHGE*LSYMAT
Trigger: CGTCGCCATATAGCTAAGCCATTCTCCATGGAGAAG...GCATCTGTTCCAGGAAAGAAGAAAAGCGAGCGAGGAAGACGGAAAAGACTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CCA 90 bp TGGCAAGCTCAGTGCAATATGGGTAGCTACGGGATTGATGAATCCAATTATGAAATAGTGATGTGCTGGTaGAGAGCCCACTCGCTCCCG +
Preference number: 4 (lower is better)
Translates to: WQAQCNMGSYGIDESNYEIVMCW*RAHSLP
Trigger: CGGGAGCGAGTGGGCTCTCCACCAGCACATCACTAT...TTCATAATTGGATTCATCAATCCCGTAGCTACCCATATTGCACTGAGCTTGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR TCA 90 bp CAAGCTCATCTGGCACACGGCAGAAGACGACAGCCAAAGCAAAGCCATTTCAAGTTTCCTTGCTCATTCTaGGATCCAAATGCTGATTGC +
Preference number: 4 (lower is better)
Translates to: QAHLAHGRRRQPKQSHFKFPCSF*DPNADC
Trigger: GCAATCAGCATTTGGATCTCAGAATGAGCAAGGAAA...CTTGAAATGGCTTTGCTTTGGCTGTCGTCTTCTGCCGTGTGCCAGATGAGCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341776.7
CDS-3UTR TCA 90 bp CCTGGCAGTCACCACTGGCAAGCTCAGTGCAATATGGGTAGCTACGGGATTGATTCTTCTGGGAATTCTTaGACTCCTTCAGAGACAAAT +
Preference number: 4 (lower is better)
Translates to: PGSHHWQAQCNMGSYGIDSSGNS*TPSETN
Trigger: ATTTGTCTCTGAAGGAGTTCAAGAATTCCCAGAAGA...ATCAATCCCGTAGCTACCCATATTGCACTGAGCTTGCCAGTGGTGACTGCCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR TCA 90 bp CCTGGCAGTCACCACTGGCAAGCTCAGTGCAATATGGGTAGCTACGGGATTGATCCCTTCTTCAAAATCTaGAGAACTAACATCGTTGCT +
Preference number: 4 (lower is better)
Translates to: PGSHHWQAQCNMGSYGIDPFFKI*RTNIVA
Trigger: AGCAACGATGTTAGTTCTTCAGATTTTGAAGAAGGG...ATCAATCCCGTAGCTACCCATATTGCACTGAGCTTGCCAGTGGTGACTGCCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR TCA 90 bp CAGATCACAAGCTCATCTGGCACACGGCAGAAGACGACAGCCAAAGCAAAGCCAAAAACATGCCCGTTGTaGACATGTTTGTGGGTTTTT +
Preference number: 4 (lower is better)
Translates to: QITSSSGTRQKTTAKAKPKTCPL*TCLWVF
Trigger: AAAAACCCACAAACATGTTCACAACGGGCATGTTTT...TGGCTTTGCTTTGGCTGTCGTCTTCTGCCGTGTGCCAGATGAGCTTGTGATCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR TCA 90 bp GCCATAGAAACCGGACAACCACATTGGAAAACACTTGACTGTTTCTGTAATTGTGGGAATCCACTGCCGTaGGTGTTGGTGTCCACCTTG +
Preference number: 4 (lower is better)
Translates to: AIETGQPHWKTLDCFCNCGNPLP*VLVSTL
Trigger: CAAGGTGGACACCAACACTCACGGCAGTGGATTCCC...ACAATTACAGAAACAGTCAAGTGTTTTCCAATGTGGTTGTCCGGTTTCTATGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR TCA 90 bp GCTCAGTGCAATATGGGTAGCTACGGGATTGATGAATCCAATTATGAAACAAAGTATTGGGGAGGACGGTaGGGTTCCATCCATGCCTCG +
Preference number: 4 (lower is better)
Translates to: AQCNMGSYGIDESNYETKYWGGR*GSIHAS
Trigger: CGAGGCATGGATGGAACCTCACCGTCCTCCCCAATA...CTTTGTTTCATAATTGGATTCATCAATCCCGTAGCTACCCATATTGCACTGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR GCA 90 bp AAATCAGGCACAGGTCTCCCTCATGTGACCCCTCCAAGGCAGGCAGTCTTTTCCCTGTTTGCGGGTTTTTaGATTGCTACTTTCAGTTTT +
Preference number: 4 (lower is better)
Translates to: KSGTGLPHVTPPRQAVFSLFAGF*IATFSF
Trigger: AAAACTGAAAGTAGCAATGCAAAAACCCGCAAACAG...GGAAAAGACTGCCTGCCTTGGAGGGGTCACATGAGGGAGACCTGTGCCTGATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR GCA 90 bp GCTCAGTGCAATATGGGTAGCTACGGGATTGATGAATCCAATTATGAAACAAAGTGTTGGTGTCCACCTTaGCGCAGTGCACTGCCACGT +
Preference number: 4 (lower is better)
Translates to: AQCNMGSYGIDESNYETKCWCPP*RSALPR
Trigger: ACGTGGCAGTGCACTGCGGCAAGGTGGACACCAACA...CTTTGTTTCATAATTGGATTCATCAATCCCGTAGCTACCCATATTGCACTGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR GCA 90 bp GGATTTCCTAATGAAATCAGGCACAGGTCTCCCTCATGTGACCCCTCCAAGGCAGAATGCAATACCAAATaGAGTCAGCACCAGTGTGTA +
Preference number: 4 (lower is better)
Translates to: GFPNEIRHRSPSCDPSKAECNTK*SQHQCV
Trigger: TACACACTGGTGCTGACTGCATTTGGTATTGCATTC...TGCCTTGGAGGGGTCACATGAGGGAGACCTGTGCCTGATTTCATTAGGAAATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CCA 90 bp GGATTTCCTAATGAAATCAGGCACAGGTCTCCCTCATGTGACCCCTCCAAGGCACTCCACTATCTTTACTaGAGTTGTGCTGGGACTATT +
Preference number: 4 (lower is better)
Translates to: GFPNEIRHRSPSCDPSKALHYLY*SCAGTI
Trigger: AATAGTCCCAGCACAACTCCAGTAAAGATAGTGGAG...TGCCTTGGAGGGGTCACATGAGGGAGACCTGTGCCTGATTTCATTAGGAAATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CCA 90 bp TTGTTAAATATTCCAAAACAGTTCAGTCTTCTGCAACAACAACCAACAAAGTGGCCGCCGGTGCTCCTCTaGGGACAGGGAGTCGTAGGA +
Preference number: 4 (lower is better)
Translates to: LLNIPKQFSLLQQQPTKWPPVLL*GQGVVG
Trigger: TCCTACGACTCCCTGTCCCCAGAGGAGCACCGGCGG...CCACTTTGTTGGTTGTTGTTGCAGAAGACTGAACTGTTTTGGAATATTTAACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CCA 90 bp TTGTTAAATATTCCAAAACAGTTCAGTCTTCTGCAACAACAACCAACAAAGTGGCTGGGGGCCACGCCGTaGATGAGCCCATTCTTGGGC +
Preference number: 4 (lower is better)
Translates to: LLNIPKQFSLLQQQPTKWLGATP*MSPFLG
Trigger: GCCCAAGAATGGGCTCATCCACGGCGTGGCCCCCAG...CCACTTTGTTGGTTGTTGTTGCAGAAGACTGAACTGTTTTGGAATATTTAACAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CCA 90 bp TGGCAAGCTCAGTGCAATATGGGTAGCTACGGGATTGATGAATCCAATTATGAAGCTTGCAGCAGGGTGTaGACCACATCTTCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: WQAQCNMGSYGIDESNYEACSRV*TTSSSL
Trigger: CAAGCTGGAAGATGTGGTCCACACCCTGCTGCAAGC...TTCATAATTGGATTCATCAATCCCGTAGCTACCCATATTGCACTGAGCTTGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CCA 90 bp TGGCAAGCTCAGTGCAATATGGGTAGCTACGGGATTGATGAATCCAATTATGAAAAGCAGACGACAAACTaGCCACTCTGCTGCACGGTC +
Preference number: 4 (lower is better)
Translates to: WQAQCNMGSYGIDESNYEKQTTN*PLCCTV
Trigger: GACCGTGCAGCAGAGTGGCCAGTTTGTCGTCTGCTT...TTCATAATTGGATTCATCAATCCCGTAGCTACCCATATTGCACTGAGCTTGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CCA 90 bp CTTCTGCAACAACAACCAACAAAGTGGATCATAGGACGTTCCTGGCAGTCACCACTTCTCCATGGAGAATaGCTTAGCTATATGGCGACG +
Preference number: 4 (lower is better)
Translates to: LLQQQPTKWIIGRSWQSPLLHGE*LSYMAT
Trigger: CGTCGCCATATAGCTAAGCCATTCTCCATGGAGAAG...TGGTGACTGCCAGGAACGTCCTATGATCCACTTTGTTGGTTGTTGTTGCAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CCA 90 bp CAAGCTCATCTGGCACACGGCAGAAGACGACAGCCAAAGCAAAGCCATTTCAAGACCGGACAACCACATTaGAAAACACTTGACTGTTTC +
Preference number: 4 (lower is better)
Translates to: QAHLAHGRRRQPKQSHFKTGQPH*KTLDCF
Trigger: GAAACAGTCAAGTGTTTTCCAATGTGGTTGTCCGGT...CTTGAAATGGCTTTGCTTTGGCTGTCGTCTTCTGCCGTGTGCCAGATGAGCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR TCA 90 bp GGATTTCCTAATGAAATCAGGCACAGGTCTCCCTCATGTGACCCCTCCAAGGCACCCTTCTTCAAAATCTaGAGAACTAACATCGTTGCT +
Preference number: 4 (lower is better)
Translates to: GFPNEIRHRSPSCDPSKAPFFKI*RTNIVA
Trigger: AGCAACGATGTTAGTTCTTCAGATTTTGAAGAAGGG...TGCCTTGGAGGGGTCACATGAGGGAGACCTGTGCCTGATTTCATTAGGAAATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR TCA 90 bp GCCATAGAAACCGGACAACCACATTGGAAAACACTTGACTGTTTCTGTAATTGTGAGAGGTCTGATATCTaGGTAGCTGGAGGGGGTAGC +
Preference number: 4 (lower is better)
Translates to: AIETGQPHWKTLDCFCNCERSDI*VAGGGS
Trigger: GCTACCCCCTCCAGCTACTCAGATATCAGACCTCTC...ACAATTACAGAAACAGTCAAGTGTTTTCCAATGTGGTTGTCCGGTTTCTATGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR TCA 90 bp GCTCAGTGCAATATGGGTAGCTACGGGATTGATGAATCCAATTATGAAACAAAGGAGAGGTCTGATATCTaGGTAGCTGGAGGGGGTAGC +
Preference number: 4 (lower is better)
Translates to: AQCNMGSYGIDESNYETKERSDI*VAGGGS
Trigger: GCTACCCCCTCCAGCTACTCAGATATCAGACCTCTC...CTTTGTTTCATAATTGGATTCATCAATCCCGTAGCTACCCATATTGCACTGAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR TCA 90 bp CTTCTGCAACAACAACCAACAAAGTGGATCATAGGACGTTCCTGGCAGTCACCAACTTTCAGTTTTCCCTaGGATTGTGTGGTTGACAGC +
Preference number: 4 (lower is better)
Translates to: LLQQQPTKWIIGRSWQSPTFSFP*DCVVDS
Trigger: GCTGTCAACCACACAATCTCAGGGAAAACTGAAAGT...TGGTGACTGCCAGGAACGTCCTATGATCCACTTTGTTGGTTGTTGTTGCAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR TCA 90 bp CTTCTGCAACAACAACCAACAAAGTGGATCATAGGACGTTCCTGGCAGTCACCATCAATGTATGGAAGGTaGTTTTGGTCTCGAGACCAG +
Preference number: 4 (lower is better)
Translates to: LLQQQPTKWIIGRSWQSPSMYGR*FWSRDQ
Trigger: CTGGTCTCGAGACCAAAATCACCTTCCATACATTGA...TGGTGACTGCCAGGAACGTCCTATGATCCACTTTGTTGGTTGTTGTTGCAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR TCA 90 bp TGGCAAGCTCAGTGCAATATGGGTAGCTACGGGATTGATGAATCCAATTATGAAGGGCTGAGATGGTACTaGGAGTGGGACCGTTTTCTT +
Preference number: 4 (lower is better)
Translates to: WQAQCNMGSYGIDESNYEGLRWY*EWDRFL
Trigger: AAGAAAACGGTCCCACTCTCAGTACCATCTCAGCCC...TTCATAATTGGATTCATCAATCCCGTAGCTACCCATATTGCACTGAGCTTGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR TCA 90 bp ACCAACAAAGTGGATCATAGGACGTTCCTGGCAGTCACCACTGGCAAGCTCAGTGCAGTTTCCAAAATCTaGCTGCAGTATCTAGGTTTT +
Preference number: 4 (lower is better)
Translates to: TNKVDHRTFLAVTTGKLSAVSKI*LQYLGF
Trigger: AAAACCTAGATACTGCAGTCAGATTTTGGAAACTGC...ACTGAGCTTGCCAGTGGTGACTGCCAGGAACGTCCTATGATCCACTTTGTTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR TCA 90 bp GGATTTCCTAATGAAATCAGGCACAGGTCTCCCTCATGTGACCCCTCCAAGGCAATTAATGCTGACTTGTaGAGGTGTCAAACAAGAAGC +
Preference number: 4 (lower is better)
Translates to: GFPNEIRHRSPSCDPSKAINADL*RCQTRS
Trigger: GCTTCTTGTTTGACACCTTCACAAGTCAGCATTAAT...TGCCTTGGAGGGGTCACATGAGGGAGACCTGTGCCTGATTTCATTAGGAAATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR GCA 90 bp GCCATAGAAACCGGACAACCACATTGGAAAACACTTGACTGTTTCTGTAATTGTCTTCTCCGCCTGGTGTaGCTCTTCCAGTCTCCTCTT +
Preference number: 4 (lower is better)
Translates to: AIETGQPHWKTLDCFCNCLLRLV*LFQSPL
Trigger: AAGAGGAGACTGGAAGAGGCACACCAGGCGGAGAAG...ACAATTACAGAAACAGTCAAGTGTTTTCCAATGTGGTTGTCCGGTTTCTATGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR GCA 90 bp GCTCAGTGCAATATGGGTAGCTACGGGATTGATGAATCCAATTATGAAACAAAGCTTCTCCGCCTGGTGTaGCTCTTCCAGTCTCCTCTT +
Preference number: 4 (lower is better)
Translates to: AQCNMGSYGIDESNYETKLLRLV*LFQSPL
Trigger: AAGAGGAGACTGGAAGAGGCACACCAGGCGGAGAAG...CTTTGTTTCATAATTGGATTCATCAATCCCGTAGCTACCCATATTGCACTGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR GCA 90 bp GCTCAGTGCAATATGGGTAGCTACGGGATTGATGAATCCAATTATGAAACAAAGTGCTGCACGGTCCTGTaGACCTTGATCCCCTCTTTG +
Preference number: 4 (lower is better)
Translates to: AQCNMGSYGIDESNYETKCCTVL*TLIPSL
Trigger: CAAAGAGGGGATCAAGGTGCACAGGACCGTGCAGCA...CTTTGTTTCATAATTGGATTCATCAATCCCGTAGCTACCCATATTGCACTGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR GCA 90 bp GCTCAGTGCAATATGGGTAGCTACGGGATTGATGAATCCAATTATGAAACAAAGCCACTGTCGCTCTCTTaGGGGGACCTCTTTTTGGTG +
Preference number: 4 (lower is better)
Translates to: AQCNMGSYGIDESNYETKPLSLS*GDLFLV
Trigger: CACCAAAAAGAGGTCCCCGCAAGAGAGCGACAGTGG...CTTTGTTTCATAATTGGATTCATCAATCCCGTAGCTACCCATATTGCACTGAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CCA 90 bp TGGCAAGCTCAGTGCAATATGGGTAGCTACGGGATTGATGAATCCAATTATGAACCTCGCGCATCTTTTTaGCACTGGTTACACCTGCAC +
Preference number: 4 (lower is better)
Translates to: WQAQCNMGSYGIDESNYEPRASF*HWLHLH
Trigger: GTGCAGGTGTAACCAGTGCCAAAAAGATGCGCGAGG...TTCATAATTGGATTCATCAATCCCGTAGCTACCCATATTGCACTGAGCTTGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CCA 90 bp GCCATAGAAACCGGACAACCACATTGGAAAACACTTGACTGTTTCTGTAATTGTGGGTGGAACTTGTGGTaGTCGTTCTCTGTGTGGCCT +
Preference number: 4 (lower is better)
Translates to: AIETGQPHWKTLDCFCNCGWNLW*SFSVWP
Trigger: AGGCCACACAGAGAACGACCACCACAAGTTCCACCC...ACAATTACAGAAACAGTCAAGTGTTTTCCAATGTGGTTGTCCGGTTTCTATGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CCA 90 bp GCTCAGTGCAATATGGGTAGCTACGGGATTGATGAATCCAATTATGAAACAAAGCAGTGCACTGCCACGTaGCAGTCCTTCTCTTCCACT +
Preference number: 4 (lower is better)
Translates to: AQCNMGSYGIDESNYETKQCTAT*QSFSST
Trigger: AGTGGAAGAGAAGGACTGCCACGTGGCAGTGCACTG...CTTTGTTTCATAATTGGATTCATCAATCCCGTAGCTACCCATATTGCACTGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CCA 90 bp GCCATAGAAACCGGACAACCACATTGGAAAACACTTGACTGTTTCTGTAATTGTGCTTGCAGCAGGGTGTaGACCACATCTTCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: AIETGQPHWKTLDCFCNCACSRV*TTSSSL
Trigger: CAAGCTGGAAGATGTGGTCCACACCCTGCTGCAAGC...ACAATTACAGAAACAGTCAAGTGTTTTCCAATGTGGTTGTCCGGTTTCTATGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR TCA 90 bp GGATTTCCTAATGAAATCAGGCACAGGTCTCCCTCATGTGACCCCTCCAAGGCACGTATTTCTTCTGAATaGTATTCCTCTTGGGTCTTT +
Preference number: 4 (lower is better)
Translates to: GFPNEIRHRSPSCDPSKARISSE*YSSWVF
Trigger: AAAGACCCAAGAGGAATATCATTCAGAAGAAATACG...TGCCTTGGAGGGGTCACATGAGGGAGACCTGTGCCTGATTTCATTAGGAAATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341776.7
CDS-3UTR TCA 90 bp GCCATAGAAACCGGACAACCACATTGGAAAACACTTGACTGTTTCTGTAATTGTTACCACCCGTTCTTCTaGCCACGGAATCCCATCACT +
Preference number: 4 (lower is better)
Translates to: AIETGQPHWKTLDCFCNCYHPFF*PRNPIT
Trigger: AGTGATGGGATTCCGTGGTCAGAAGAACGGGTGGTA...ACAATTACAGAAACAGTCAAGTGTTTTCCAATGTGGTTGTCCGGTTTCTATGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR TCA 90 bp AGGCAGTCTTTTCCGTCTTCCTCGCTCGCTTTTCTTCTTTCCTGGAACAGATGCTCTTCTGGGAATTCTTaGACTCCTTCAGAGACAAAT +
Preference number: 4 (lower is better)
Translates to: RQSFPSSSLAFLLSWNRCSSGNS*TPSETN
Trigger: ATTTGTCTCTGAAGGAGTTCAAGAATTCCCAGAAGA...GCATCTGTTCCAGGAAAGAAGAAAAGCGAGCGAGGAAGACGGAAAAGACTGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR TCA 90 bp TTGTTAAATATTCCAAAACAGTTCAGTCTTCTGCAACAACAACCAACAAAGTGGCGGCTGTCAGCCCGGTaGTCGCTGTGCTTCTCCTTT +
Preference number: 4 (lower is better)
Translates to: LLNIPKQFSLLQQQPTKWRLSAR*SLCFSF
Trigger: AAAGGAGAAGCACAGCGATCACCGGGCTGACAGCCG...CCACTTTGTTGGTTGTTGTTGCAGAAGACTGAACTGTTTTGGAATATTTAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR TCA 90 bp CTTCTGCAACAACAACCAACAAAGTGGATCATAGGACGTTCCTGGCAGTCACCATCAAACAAGAAGCGGTaGGATGGAGATGGAATGTTA +
Preference number: 4 (lower is better)
Translates to: LLQQQPTKWIIGRSWQSPSNKKR*DGDGML
Trigger: TAACATTCCATCTCCATCTCACCGCTTCTTGTTTGA...TGGTGACTGCCAGGAACGTCCTATGATCCACTTTGTTGGTTGTTGTTGCAGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR GCA 90 bp TTGTTAAATATTCCAAAACAGTTCAGTCTTCTGCAACAACAACCAACAAAGTGGTGCTGCCATCGTGGCTaGCATAGCGTGCGGAGGAGT +
Preference number: 4 (lower is better)
Translates to: LLNIPKQFSLLQQQPTKWCCHRG*HSVRRS
Trigger: ACTCCTCCGCACGCTATGGCAGCCACGATGGCAGCA...CCACTTTGTTGGTTGTTGTTGCAGAAGACTGAACTGTTTTGGAATATTTAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CCA 90 bp GCCATAGAAACCGGACAACCACATTGGAAAACACTTGACTGTTTCTGTAATTGTACCCACAGCACACTTTaGACACAAAGGATCCCGGGA +
Preference number: 4 (lower is better)
Translates to: AIETGQPHWKTLDCFCNCTHSTL*TQRIPG
Trigger: TCCCGGGATCCTTTGTGTCCAAAGTGTGCTGTGGGT...ACAATTACAGAAACAGTCAAGTGTTTTCCAATGTGGTTGTCCGGTTTCTATGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CCA 90 bp CTTCTGCAACAACAACCAACAAAGTGGATCATAGGACGTTCCTGGCAGTCACCAAATGGCTTAGCTATATaGCGACGCTTCATTTCCTTG +
Preference number: 4 (lower is better)
Translates to: LLQQQPTKWIIGRSWQSPNGLAI*RRFISL
Trigger: CAAGGAAATGAAGCGTCGCCATATAGCTAAGCCATT...TGGTGACTGCCAGGAACGTCCTATGATCCACTTTGTTGGTTGTTGTTGCAGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CCA 90 bp GCCATAGAAACCGGACAACCACATTGGAAAACACTTGACTGTTTCTGTAATTGTATCGACCACGGGCGTTaGCATCTTCATGATGAGCTC +
Preference number: 4 (lower is better)
Translates to: AIETGQPHWKTLDCFCNCIDHGR*HLHDEL
Trigger: GAGCTCATCATGAAGATGCCAACGCCCGTGGTCGAT...ACAATTACAGAAACAGTCAAGTGTTTTCCAATGTGGTTGTCCGGTTTCTATGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR TCA 90 bp AGGCAGTCTTTTCCGTCTTCCTCGCTCGCTTTTCTTCTTTCCTGGAACAGATGCTCATCGTATTTCTTCTaGATGATATTCCTCTTGGGT +
Preference number: 4 (lower is better)
Translates to: RQSFPSSSLAFLLSWNRCSSYFF*MIFLLG
Trigger: ACCCAAGAGGAATATCATTCAGAAGAAATACGATGA...GCATCTGTTCCAGGAAAGAAGAAAAGCGAGCGAGGAAGACGGAAAAGACTGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341776.7
CDS-3UTR TCA 90 bp GCCATAGAAACCGGACAACCACATTGGAAAACACTTGACTGTTTCTGTAATTGTTTCCTTCTCCCGTGTTaGCCTGCTGGAACCATTGAA +
Preference number: 4 (lower is better)
Translates to: AIETGQPHWKTLDCFCNCFLLPC*PAGTIE
Trigger: TTCAATGGTTCCAGCAGGTCAACACGGGAGAAGGAA...ACAATTACAGAAACAGTCAAGTGTTTTCCAATGTGGTTGTCCGGTTTCTATGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR TCA 90 bp GCCATAGAAACCGGACAACCACATTGGAAAACACTTGACTGTTTCTGTAATTGTTGTGCTGAATCTGCGTaGCAAACCGCATCTCATCGT +
Preference number: 4 (lower is better)
Translates to: AIETGQPHWKTLDCFCNCCAESA*QTASHR
Trigger: ACGATGAGATGCGGTTTGTCACGCAGATTCAGCACA...ACAATTACAGAAACAGTCAAGTGTTTTCCAATGTGGTTGTCCGGTTTCTATGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR GCA 90 bp CTTCTGCAACAACAACCAACAAAGTGGATCATAGGACGTTCCTGGCAGTCACCAGCAAAAGGGGACAATTaGTTCATGAATTTAAAGCCG +
Preference number: 4 (lower is better)
Translates to: LLQQQPTKWIIGRSWQSPAKGDN*FMNLKP
Trigger: CGGCTTTAAATTCATGAAGCAATTGTCCCCTTTTGC...TGGTGACTGCCAGGAACGTCCTATGATCCACTTTGTTGGTTGTTGTTGCAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341776.7
CDS-3UTR GCA 90 bp TGGCAAGCTCAGTGCAATATGGGTAGCTACGGGATTGATGAATCCAATTATGAAGGGATAGCACCTGTTTaGGGGTTTTTGCATTGCTAC +
Preference number: 4 (lower is better)
Translates to: WQAQCNMGSYGIDESNYEGIAPV*GFLHCY
Trigger: GTAGCAATGCAAAAACCCGCAAACAGGTGCTATCCC...TTCATAATTGGATTCATCAATCCCGTAGCTACCCATATTGCACTGAGCTTGCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR GCA 90 bp TTGTTAAATATTCCAAAACAGTTCAGTCTTCTGCAACAACAACCAACAAAGTGGAACTGGCCACTCTGCTaGACGGTCCTGTGCACCTTG +
Preference number: 4 (lower is better)
Translates to: LLNIPKQFSLLQQQPTKWNWPLC*TVLCTL
Trigger: CAAGGTGCACAGGACCGTGCAGCAGAGTGGCCAGTT...CCACTTTGTTGGTTGTTGTTGCAGAAGACTGAACTGTTTTGGAATATTTAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR GCA 90 bp GCTCAGTGCAATATGGGTAGCTACGGGATTGATGAATCCAATTATGAAACAAAGTCTGACGTCTCCAACTaGAGCCACTTTCGAGGCTTT +
Preference number: 4 (lower is better)
Translates to: AQCNMGSYGIDESNYETKSDVSN*SHFRGF
Trigger: AAAGCCTCGAAAGTGGCTGCAGTTGGAGACGTCAGA...CTTTGTTTCATAATTGGATTCATCAATCCCGTAGCTACCCATATTGCACTGAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CCA 90 bp GCTCAGTGCAATATGGGTAGCTACGGGATTGATGAATCCAATTATGAAACAAAGTTCCTGGGGGTCGACTaGCATGAAGATGAAGCATTG +
Preference number: 4 (lower is better)
Translates to: AQCNMGSYGIDESNYETKFLGVD*HEDEAL
Trigger: CAATGCTTCATCTTCATGCCAGTCGACCCCCAGGAA...CTTTGTTTCATAATTGGATTCATCAATCCCGTAGCTACCCATATTGCACTGAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CCA 90 bp GCCATAGAAACCGGACAACCACATTGGAAAACACTTGACTGTTTCTGTAATTGTGCATCTTTTTGGCACTaGTTACACCTGCACCCAGAG +
Preference number: 4 (lower is better)
Translates to: AIETGQPHWKTLDCFCNCASFWH*LHLHPE
Trigger: CTCTGGGTGCAGGTGTAACCAGTGCCAAAAAGATGC...ACAATTACAGAAACAGTCAAGTGTTTTCCAATGTGGTTGTCCGGTTTCTATGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR TCA 90 bp TGGCAAGCTCAGTGCAATATGGGTAGCTACGGGATTGATGAATCCAATTATGAAAAGGTCCTTAGTGTCTaGTCCGTAGTTACATCTTGG +
Preference number: 4 (lower is better)
Translates to: WQAQCNMGSYGIDESNYEKVLSV*SVVTSW
Trigger: CCAAGATGTAACTACGGATCAGACACTAAGGACCTT...TTCATAATTGGATTCATCAATCCCGTAGCTACCCATATTGCACTGAGCTTGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341776.7
CDS-3UTR TCA 90 bp TGGCAAGCTCAGTGCAATATGGGTAGCTACGGGATTGATGAATCCAATTATGAATGTTGGTGGCTGTTTTaGCGTCTTCTGTCTCATCAT +
Preference number: 4 (lower is better)
Translates to: WQAQCNMGSYGIDESNYECWWLF*RLLSHH
Trigger: ATGATGAGACAGAAGACGTCAAAACAGCCACCAACA...TTCATAATTGGATTCATCAATCCCGTAGCTACCCATATTGCACTGAGCTTGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR TCA 90 bp TTGTTAAATATTCCAAAACAGTTCAGTCTTCTGCAACAACAACCAACAAAGTGGCCTCCGGGGAGATCATaGCGTTGCTTTCCAGCATCT +
Preference number: 4 (lower is better)
Translates to: LLNIPKQFSLLQQQPTKWPPGRS*RCFPAS
Trigger: AGATGCTGGAAAGCAACGTCATGATCTCCCCGGAGG...CCACTTTGTTGGTTGTTGTTGCAGAAGACTGAACTGTTTTGGAATATTTAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR GCA 90 bp TGGCAAGCTCAGTGCAATATGGGTAGCTACGGGATTGATGAATCCAATTATGAACGGGAGTGGCCTCTTTaGTTTTGTGTTTTTGAACAG +
Preference number: 4 (lower is better)
Translates to: WQAQCNMGSYGIDESNYEREWPL*FCVFEQ
Trigger: CTGTTCAAAAACACAAAAGCAAAGAGGCCACTCCCG...TTCATAATTGGATTCATCAATCCCGTAGCTACCCATATTGCACTGAGCTTGCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR GCA 90 bp TTGTTAAATATTCCAAAACAGTTCAGTCTTCTGCAACAACAACCAACAAAGTGGTGCTGCACGGTCCTGTaGACCTTGATCCCCTCTTTG +
Preference number: 4 (lower is better)
Translates to: LLNIPKQFSLLQQQPTKWCCTVL*TLIPSL
Trigger: CAAAGAGGGGATCAAGGTGCACAGGACCGTGCAGCA...CCACTTTGTTGGTTGTTGTTGCAGAAGACTGAACTGTTTTGGAATATTTAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CCA 90 bp GCCATAGAAACCGGACAACCACATTGGAAAACACTTGACTGTTTCTGTAATTGTCCTAATCCCTTAGACTaGTCATTACCAAGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: AIETGQPHWKTLDCFCNCPNPLD*SLPRSP
Trigger: TGGGCTCCTTGGTAATGACCAGTCTAAGGGATTAGG...ACAATTACAGAAACAGTCAAGTGTTTTCCAATGTGGTTGTCCGGTTTCTATGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR TCA 90 bp TGGCAAGCTCAGTGCAATATGGGTAGCTACGGGATTGATGAATCCAATTATGAATTGCTTTTGTGTTTTTaGACAGGTTCCTTCTCCCGT +
Preference number: 4 (lower is better)
Translates to: WQAQCNMGSYGIDESNYELLLCF*TGSFSR
Trigger: ACGGGAGAAGGAACCTGTTCAAAAACACAAAAGCAA...TTCATAATTGGATTCATCAATCCCGTAGCTACCCATATTGCACTGAGCTTGCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR TCA 90 bp GCCATAGAAACCGGACAACCACATTGGAAAACACTTGACTGTTTCTGTAATTGTACTTTGCCGCAGATCTaGTTGACCAGACTGATAATC +
Preference number: 4 (lower is better)
Translates to: AIETGQPHWKTLDCFCNCTLPQI*LTRLII
Trigger: GATTATCAGTCTGGTCAATCAGATCTGCGGCAAAGT...ACAATTACAGAAACAGTCAAGTGTTTTCCAATGTGGTTGTCCGGTTTCTATGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR TCA 90 bp TGGCAAGCTCAGTGCAATATGGGTAGCTACGGGATTGATGAATCCAATTATGAATCAAACAAGAAGCGGTaGGATGGAGATGGAATGTTA +
Preference number: 4 (lower is better)
Translates to: WQAQCNMGSYGIDESNYESNKKR*DGDGML
Trigger: TAACATTCCATCTCCATCTCACCGCTTCTTGTTTGA...TTCATAATTGGATTCATCAATCCCGTAGCTACCCATATTGCACTGAGCTTGCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR GCA 90 bp TGGCAAGCTCAGTGCAATATGGGTAGCTACGGGATTGATGAATCCAATTATGAAGACAGTTCTCAATGCTaGCGTTTTTACCAGACACTT +
Preference number: 4 (lower is better)
Translates to: WQAQCNMGSYGIDESNYEDSSQC*RFYQTL
Trigger: AAGTGTCTGGTAAAAACGGCAGCATTGAGAACTGTC...TTCATAATTGGATTCATCAATCCCGTAGCTACCCATATTGCACTGAGCTTGCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR GCA 90 bp TGGCAAGCTCAGTGCAATATGGGTAGCTACGGGATTGATGAATCCAATTATGAAACATTCAAAAATAACTaGAGGCCTCCTAGTGGCTCT +
Preference number: 4 (lower is better)
Translates to: WQAQCNMGSYGIDESNYETFKNN*RPPSGS
Trigger: AGAGCCACTAGGAGGCCTGCAGTTATTTTTGAATGT...TTCATAATTGGATTCATCAATCCCGTAGCTACCCATATTGCACTGAGCTTGCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR GCA 90 bp TTGTTAAATATTCCAAAACAGTTCAGTCTTCTGCAACAACAACCAACAAAGTGGCACTGGCAAGCTCAGTaGAATATGGGTAGCTACGGG +
Preference number: 4 (lower is better)
Translates to: LLNIPKQFSLLQQQPTKWHWQAQ*NMGSYG
Trigger: CCCGTAGCTACCCATATTGCACTGAGCTTGCCAGTG...CCACTTTGTTGGTTGTTGTTGCAGAAGACTGAACTGTTTTGGAATATTTAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CCA 90 bp TTGTTAAATATTCCAAAACAGTTCAGTCTTCTGCAACAACAACCAACAAAGTGGCCCCCTTCGTCACCGTaGCAGTGTACTTCACAGTTT +
Preference number: 4 (lower is better)
Translates to: LLNIPKQFSLLQQQPTKWPPSSP*QCTSQF
Trigger: AAACTGTGAAGTACACTGCCACGGTGACGAAGGGGG...CCACTTTGTTGGTTGTTGTTGCAGAAGACTGAACTGTTTTGGAATATTTAACAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CCA 90 bp TTGTTAAATATTCCAAAACAGTTCAGTCTTCTGCAACAACAACCAACAAAGTGGTTCCCTGAGATTGTGTaGTTGACAGCGGAACTGGGC +
Preference number: 4 (lower is better)
Translates to: LLNIPKQFSLLQQQPTKWFPEIV*LTAELG
Trigger: GCCCAGTTCCGCTGTCAACCACACAATCTCAGGGAA...CCACTTTGTTGGTTGTTGTTGCAGAAGACTGAACTGTTTTGGAATATTTAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CCA 90 bp GCTCAGTGCAATATGGGTAGCTACGGGATTGATGAATCCAATTATGAAACAAAGAAGCTCAGTGCAATATaGGTAGCTACGGGATTGATG +
Preference number: 4 (lower is better)
Translates to: AQCNMGSYGIDESNYETKKLSAI*VATGLM
Trigger: CATCAATCCCGTAGCTACCCATATTGCACTGAGCTT...CTTTGTTTCATAATTGGATTCATCAATCCCGTAGCTACCCATATTGCACTGAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CCA 90 bp TTGTTAAATATTCCAAAACAGTTCAGTCTTCTGCAACAACAACCAACAAAGTGGCCTGGCAGTCACCACTaGCAAGCTCAGTGCAATATG +
Preference number: 4 (lower is better)
Translates to: LLNIPKQFSLLQQQPTKWPGSHH*QAQCNM
Trigger: CATATTGCACTGAGCTTGCCAGTGGTGACTGCCAGG...CCACTTTGTTGGTTGTTGTTGCAGAAGACTGAACTGTTTTGGAATATTTAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
3UTR CAA 72 bp ACTGGCAAGCTCAGTGCAATATGGGTAGCTACGGGATaGATGAATCCAATTATGAAACAAAGAACAGCTTGT +
Preference number: 4 (lower is better)
Translates to: TGKLSAIWVATG*MNPIMKQRTAC
Trigger: ACAAGCTGTTCTTTGTTTCATAATTGGATTCATCAATCCCGTAGCTACCCATATTGCACTGAGCTTGCCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR TCA 90 bp GCTCAGTGCAATATGGGTAGCTACGGGATTGATGAATCCAATTATGAAACAAAGCTGAGATCCAAATGCTaGTTGCAAAAGGGGACAATT +
Preference number: 4 (lower is better)
Translates to: AQCNMGSYGIDESNYETKLRSKC*LQKGTI
Trigger: AATTGTCCCCTTTTGCAATCAGCATTTGGATCTCAG...CTTTGTTTCATAATTGGATTCATCAATCCCGTAGCTACCCATATTGCACTGAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341776.7
CDS-3UTR TCA 90 bp TTGTTAAATATTCCAAAACAGTTCAGTCTTCTGCAACAACAACCAACAAAGTGGTGTGCTGAATCTGCGTaGCAAACCGCATCTCATCGT +
Preference number: 4 (lower is better)
Translates to: LLNIPKQFSLLQQQPTKWCAESA*QTASHR
Trigger: ACGATGAGATGCGGTTTGTCACGCAGATTCAGCACA...CCACTTTGTTGGTTGTTGTTGCAGAAGACTGAACTGTTTTGGAATATTTAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR TCA 90 bp TGGCAAGCTCAGTGCAATATGGGTAGCTACGGGATTGATGAATCCAATTATGAAATTAATGCTGACTTGTaGAGGTGTCAAACAAGAAGC +
Preference number: 4 (lower is better)
Translates to: WQAQCNMGSYGIDESNYEINADL*RCQTRS
Trigger: GCTTCTTGTTTGACACCTTCACAAGTCAGCATTAAT...TTCATAATTGGATTCATCAATCCCGTAGCTACCCATATTGCACTGAGCTTGCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR GCA 90 bp TTGTTAAATATTCCAAAACAGTTCAGTCTTCTGCAACAACAACCAACAAAGTGGAACTTCCTTTGTGCTTaGAGCCTGGGCCTTTTCCTC +
Preference number: 4 (lower is better)
Translates to: LLNIPKQFSLLQQQPTKWNFLCA*SLGLFL
Trigger: GAGGAAAAGGCCCAGGCTGCAAGCACAAAGGAAGTT...CCACTTTGTTGGTTGTTGTTGCAGAAGACTGAACTGTTTTGGAATATTTAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CCA 90 bp GCCATAGAAACCGGACAACCACATTGGAAAACACTTGACTGTTTCTGTAATTGTAATGGCTTAGCTATATaGCGACGCTTCATTTCCTTG +
Preference number: 4 (lower is better)
Translates to: AIETGQPHWKTLDCFCNCNGLAI*RRFISL
Trigger: CAAGGAAATGAAGCGTCGCCATATAGCTAAGCCATT...ACAATTACAGAAACAGTCAAGTGTTTTCCAATGTGGTTGTCCGGTTTCTATGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR TCA 90 bp GCCATAGAAACCGGACAACCACATTGGAAAACACTTGACTGTTTCTGTAATTGTAAAACATGCCCGTTGTaGACATGTTTGTGGGTTTTT +
Preference number: 4 (lower is better)
Translates to: AIETGQPHWKTLDCFCNCKTCPL*TCLWVF
Trigger: AAAAACCCACAAACATGTTCACAACGGGCATGTTTT...ACAATTACAGAAACAGTCAAGTGTTTTCCAATGTGGTTGTCCGGTTTCTATGGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR TCA 90 bp GCCATAGAAACCGGACAACCACATTGGAAAACACTTGACTGTTTCTGTAATTGTGGGTTTTTAAAACAGTaGCTATACGGCAGTTTCCAA +
Preference number: 4 (lower is better)
Translates to: AIETGQPHWKTLDCFCNCGFLKQ*LYGSFQ
Trigger: TTGGAAACTGCCGTATAGTCACTGTTTTAAAAACCC...ACAATTACAGAAACAGTCAAGTGTTTTCCAATGTGGTTGTCCGGTTTCTATGGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CCA 90 bp TTGTTAAATATTCCAAAACAGTTCAGTCTTCTGCAACAACAACCAACAAAGTGGCTAGTGGAGGACACTTaGGATGCATCGTCCTTTTCA +
Preference number: 4 (lower is better)
Translates to: LLNIPKQFSLLQQQPTKWLVEDT*DASSFS
Trigger: TGAAAAGGACGATGCATCCCAAGTGTCCTCCACTAG...CCACTTTGTTGGTTGTTGTTGCAGAAGACTGAACTGTTTTGGAATATTTAACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR TCA 90 bp TTGTTAAATATTCCAAAACAGTTCAGTCTTCTGCAACAACAACCAACAAAGTGGAGTGCAAAGACAGCTTaGATCCTACAGCAAGTACTC +
Preference number: 4 (lower is better)
Translates to: LLNIPKQFSLLQQQPTKWSAKTA*ILQQVL
Trigger: GAGTACTTGCTGTAGGATTCAAGCTGTCTTTGCACT...CCACTTTGTTGGTTGTTGTTGCAGAAGACTGAACTGTTTTGGAATATTTAACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR GCA 90 bp GCCATAGAAACCGGACAACCACATTGGAAAACACTTGACTGTTTCTGTAATTGTCTGTTTGCGGGTTTTTaGATTGCTACTTTCAGTTTT +
Preference number: 4 (lower is better)
Translates to: AIETGQPHWKTLDCFCNCLFAGF*IATFSF
Trigger: AAAACTGAAAGTAGCAATGCAAAAACCCGCAAACAG...ACAATTACAGAAACAGTCAAGTGTTTTCCAATGTGGTTGTCCGGTTTCTATGGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR GCA 90 bp TTGTTAAATATTCCAAAACAGTTCAGTCTTCTGCAACAACAACCAACAAAGTGGAACAGTTCAGTCTTCTaGAACAACAACCAACAAAGT +
Preference number: 4 (lower is better)
Translates to: LLNIPKQFSLLQQQPTKWNSSVF*NNNQQS
Trigger: ACTTTGTTGGTTGTTGTTGCAGAAGACTGAACTGTT...CCACTTTGTTGGTTGTTGTTGCAGAAGACTGAACTGTTTTGGAATATTTAACAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS TCA 90 bp CTTGGCCGAGGAACCCGTGGAGGGGGCCGCTGCGGGGTGGTTAGCTaGAGCCTGCTCCCGGCGGCTGTCAGCCCGGTGATCGCTGTGCTT +
Preference number: 5 (lower is better)
Translates to: LGRGTRGGGRCGVVS*SLLPAAVSPVIAVL
Trigger: AAGCACAGCGATCACCGGGCTGACAGCCGCCGGGAGCAGGCTTCAGCTAACCACCCCGCAGCGGCCCCCTCCACGGGTTCCTCGGCCAAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS GCA 90 bp CTTCCCGTCCGCCACCGTGCTGCTGCCATCGTGGCTGCCATAGCGTaGGGAGGAGTGGAGGCCAGCCTCGAACAGCTGCCTGCGCTGCCG +
Preference number: 5 (lower is better)
Translates to: LPVRHRAAAIVAAIA*GGVEASLEQLPALP
Trigger: CGGCAGCGCAGGCAGCTGTTCGAGGCTGGCCTCCACTCCTCCGCACGCTATGGCAGCCACGATGGCAGCAGCACGGTGGCGGACGGGAAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS GCA 90 bp CACAGGAGGCGCTGTCCGCCTTGCCATGTGCTTGTCTGCCTGGCGTaGTCTTCCCGGCCGTGGCCCGCTTCGGCCGATTCCTCTCCAGAC +
Preference number: 5 (lower is better)
Translates to: HRRRCPPCHVLVCLA*SSRPWPASADSSPD
Trigger: GTCTGGAGAGGAATCGGCCGAAGCGGGCCACGGCCGGGAAGAGCACGCCAGGCAGACAAGCACATGGCAAGGCGGACAGCGCCTCCTGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS CCA 90 bp CCGCCTTGCCATGTGCTTGTCTGCCTGGCGTGCTCTTCCCGGCCGTaGCCCGCTTCGGCCGATTCCTCTCCAGACTGCGCTCCGGCACTT +
Preference number: 5 (lower is better)
Translates to: PPCHVLVCLACSSRP*PASADSSPDCAPAL
Trigger: AAGTGCCGGAGCGCAGTCTGGAGAGGAATCGGCCGAAGCGGGCCACGGCCGGGAAGAGCACGCCAGGCAGACAAGCACATGGCAAGGCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS GCA 90 bp GCCCACCCGGCCTTGCCGCCGCCCTTCTCGGCCTTGCCCGAGTCCTaGGGCTTGTGCACGGACTCCGGTTGCGAGGTAGAACGATTTTCA +
Preference number: 5 (lower is better)
Translates to: AHPALPPPFSALPES*GLCTDSGCEVERFS
Trigger: TGAAAATCGTTCTACCTCGCAACCGGAGTCCGTGCACAAGCCGCAGGACTCGGGCAAGGCCGAGAAGGGCGGCGGCAAGGCCGGGTGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS GCA 90 bp GCCTTGCCGCCGCCCTTCTCGGCCTTGCCCGAGTCCTGCGGCTTGTaGACGGACTCCGGTTGCGAGGTAGAACGATTTTCACAGGAGGCG +
Preference number: 5 (lower is better)
Translates to: ALPPPFSALPESCGL*TDSGCEVERFSQEA
Trigger: CGCCTCCTGTGAAAATCGTTCTACCTCGCAACCGGAGTCCGTGCACAAGCCGCAGGACTCGGGCAAGGCCGAGAAGGGCGGCGGCAAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS GCA 90 bp GAGGCTTTTTCTTCCCGTCCGCCACCGTGCTGCTGCCATCGTGGCTaGCATAGCGTGCGGAGGAGTGGAGGCCAGCCTCGAACAGCTGCC +
Preference number: 5 (lower is better)
Translates to: EAFSSRPPPCCCHRG*HSVRRSGGQPRTAA
Trigger: GGCAGCTGTTCGAGGCTGGCCTCCACTCCTCCGCACGCTATGGCAGCCACGATGGCAGCAGCACGGTGGCGGACGGGAAGAAAAAGCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS CCA 90 bp ACCTCCTTGAGCTTGCTGCGGAAGCCGTTCCTGGGGGCCACGCCGTaGATGAGCCCATTCTTGGGCTCGAAGCGGGGCAGAGGGTGGAAC +
Preference number: 5 (lower is better)
Translates to: TSLSLLRKPFLGATP*MSPFLGSKRGRGWN
Trigger: GTTCCACCCTCTGCCCCGCTTCGAGCCCAAGAATGGGCTCATCCACGGCGTGGCCCCCAGGAACGGCTTCCGCAGCAAGCTCAAGGAGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS GCA 90 bp TGCTCTTCCCGGCCGTGGCCCGCTTCGGCCGATTCCTCTCCAGACTaGGCTCCGGCACTTCCTTCTTCACGTGTCCGTTCAGCAGACCTC +
Preference number: 5 (lower is better)
Translates to: CSSRPWPASADSSPD*APALPSSRVRSADL
Trigger: GAGGTCTGCTGAACGGACACGTGAAGAAGGAAGTGCCGGAGCGCAGTCTGGAGAGGAATCGGCCGAAGCGGGCCACGGCCGGGAAGAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS GCA 90 bp AACGATTTTCACAGGAGGCGCTGTCCGCCTTGCCATGTGCTTGTCTaGCTGGCGTGCTCTTCCCGGCCGTGGCCCGCTTCGGCCGATTCC +
Preference number: 5 (lower is better)
Translates to: NDFHRRRCPPCHVLV*LACSSRPWPASADS
Trigger: GGAATCGGCCGAAGCGGGCCACGGCCGGGAAGAGCACGCCAGGCAGACAAGCACATGGCAAGGCGGACAGCGCCTCCTGTGAAAATCGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS GCA 90 bp CGAGGTAGAACGATTTTCACAGGAGGCGCTGTCCGCCTTGCCATGTaGTTGTCTGCCTGGCGTGCTCTTCCCGGCCGTGGCCCGCTTCGG +
Preference number: 5 (lower is better)
Translates to: RGRTIFTGGAVRLAM*LSAWRALPGRGPLR
Trigger: CCGAAGCGGGCCACGGCCGGGAAGAGCACGCCAGGCAGACAAGCACATGGCAAGGCGGACAGCGCCTCCTGTGAAAATCGTTCTACCTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS GCA 90 bp GCAGCCACTTTCGAGGCTTTTTCTTCCCGTCCGCCACCGTGCTGCTaGCATCGTGGCTGCCATAGCGTGCGGAGGAGTGGAGGCCAGCCT +
Preference number: 5 (lower is better)
Translates to: AATFEAFSSRPPPCC*HRGCHSVRRSGGQP
Trigger: AGGCTGGCCTCCACTCCTCCGCACGCTATGGCAGCCACGATGGCAGCAGCACGGTGGCGGACGGGAAGAAAAAGCCTCGAAAGTGGCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS CCA 90 bp ATTTTCACAGGAGGCGCTGTCCGCCTTGCCATGTGCTTGTCTGCCTaGCGTGCTCTTCCCGGCCGTGGCCCGCTTCGGCCGATTCCTCTC +
Preference number: 5 (lower is better)
Translates to: IFTGGAVRLAMCLSA*RALPGRGPLRPIPL
Trigger: GAGAGGAATCGGCCGAAGCGGGCCACGGCCGGGAAGAGCACGCCAGGCAGACAAGCACATGGCAAGGCGGACAGCGCCTCCTGTGAAAAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS CCA 90 bp ACGCCGTGGATGAGCCCATTCTTGGGCTCGAAGCGGGGCAGAGGGTaGAACTTGTGGTGGTCGTTCTCTGTGTGGCCTTCCAGCGGCCCC +
Preference number: 5 (lower is better)
Translates to: TPWMSPFLGSKRGRG*NLWWSFSVWPSSGP
Trigger: GGGGCCGCTGGAAGGCCACACAGAGAACGACCACCACAAGTTCCACCCTCTGCCCCGCTTCGAGCCCAAGAATGGGCTCATCCACGGCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS TCA 90 bp GCGGGGTGGTTAGCTGAAGCCTGCTCCCGGCGGCTGTCAGCCCGGTaGTCGCTGTGCTTCTCCTTTGCGGGAGTGGCCTCTTTGCTTTTG +
Preference number: 5 (lower is better)
Translates to: AGWLAEACSRRLSAR*SLCFSFAGVASLLL
Trigger: CAAAAGCAAAGAGGCCACTCCCGCAAAGGAGAAGCACAGCGATCACCGGGCTGACAGCCGCCGGGAGCAGGCTTCAGCTAACCACCCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS GCA 90 bp ACTGCAGCCACTTTCGAGGCTTTTTCTTCCCGTCCGCCACCGTGCTaGTGCCATCGTGGCTGCCATAGCGTGCGGAGGAGTGGAGGCCAG +
Preference number: 5 (lower is better)
Translates to: TAATFEAFSSRPPPC*CHRGCHSVRRSGGQ
Trigger: CTGGCCTCCACTCCTCCGCACGCTATGGCAGCCACGATGGCAGCAGCACGGTGGCGGACGGGAAGAAAAAGCCTCGAAAGTGGCTGCAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS GCA 90 bp CCAACTGCAGCCACTTTCGAGGCTTTTTCTTCCCGTCCGCCACCGTaGTGCTGCCATCGTGGCTGCCATAGCGTGCGGAGGAGTGGAGGC +
Preference number: 5 (lower is better)
Translates to: PTAATFEAFSSRPPP*CCHRGCHSVRRSGG
Trigger: GCCTCCACTCCTCCGCACGCTATGGCAGCCACGATGGCAGCAGCACGGTGGCGGACGGGAAGAAAAAGCCTCGAAAGTGGCTGCAGTTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS CCA 90 bp AGCCCATTCTTGGGCTCGAAGCGGGGCAGAGGGTGGAACTTGTGGTaGTCGTTCTCTGTGTGGCCTTCCAGCGGCCCCTTGCGCTTCTCC +
Preference number: 5 (lower is better)
Translates to: SPFLGSKRGRGWNLW*SFSVWPSSGPLRFS
Trigger: GGAGAAGCGCAAGGGGCCGCTGGAAGGCCACACAGAGAACGACCACCACAAGTTCCACCCTCTGCCCCGCTTCGAGCCCAAGAATGGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS TCA 90 bp CGCTGCACGTTGGGGCCCCAGCGCCGGCCCAGCTTGTGGATGTGCTaGATCTGCGTGACAAACCGCATCTCATCGTTGAGCTTGCACTCG +
Preference number: 5 (lower is better)
Translates to: RCTLGPQRRPSLWMC*ICVTNRISSLSLHS
Trigger: CGAGTGCAAGCTCAACGATGAGATGCGGTTTGTCACGCAGATTCAGCACATCCACAAGCTGGGCCGGCGCTGGGGCCCCAACGTGCAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS GCA 90 bp TTCTCGGCCTTGCCCGAGTCCTGCGGCTTGTGCACGGACTCCGGTTaGGAGGTAGAACGATTTTCACAGGAGGCGCTGTCCGCCTTGCCA +
Preference number: 5 (lower is better)
Translates to: FSALPESCGLCTDSG*EVERFSQEALSALP
Trigger: TGGCAAGGCGGACAGCGCCTCCTGTGAAAATCGTTCTACCTCGCAACCGGAGTCCGTGCACAAGCCGCAGGACTCGGGCAAGGCCGAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS CCA 90 bp TCGAAGCGGGGCAGAGGGTGGAACTTGTGGTGGTCGTTCTCTGTGTaGCCTTCCAGCGGCCCCTTGCGCTTCTCCAGGATCTCCTTCTCC +
Preference number: 5 (lower is better)
Translates to: SKRGRGWNLWWSFSV*PSSGPLRFSRISFS
Trigger: GGAGAAGGAGATCCTGGAGAAGCGCAAGGGGCCGCTGGAAGGCCACACAGAGAACGACCACCACAAGTTCCACCCTCTGCCCCGCTTCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS CCA 90 bp ATGAGCCCATTCTTGGGCTCGAAGCGGGGCAGAGGGTGGAACTTGTaGTGGTCGTTCTCTGTGTGGCCTTCCAGCGGCCCCTTGCGCTTC +
Preference number: 5 (lower is better)
Translates to: MSPFLGSKRGRGWNL*WSFSVWPSSGPLRF
Trigger: GAAGCGCAAGGGGCCGCTGGAAGGCCACACAGAGAACGACCACCACAAGTTCCACCCTCTGCCCCGCTTCGAGCCCAAGAATGGGCTCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS TCA 90 bp AGCTCACAGCCCCCTATGAGCGGGAGCTCGTCCATGGTGATGCCCTaGGATTTGAGGTGCTTCTTGATGCAGGCCAGCCGCTGCACGTTG +
Preference number: 5 (lower is better)
Translates to: SSQPPMSGSSSMVMP*DLRCFLMQASRCTL
Trigger: CAACGTGCAGCGGCTGGCCTGCATCAAGAAGCACCTCAAATCTCAGGGCATCACCATGGACGAGCTCCCGCTCATAGGGGGCTGTGAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS GCA 90 bp TTGCACAGCACCTCCGGGGAGATCATGACGTTGCTTTCCAGCATCTaGAGCCCTGGGGTGCCATTGGCTTGCAGCAGGGTGTGGACCACA +
Preference number: 5 (lower is better)
Translates to: LHSTSGEIMTLLSSI*SPGVPLACSRVWTT
Trigger: TGTGGTCCACACCCTGCTGCAAGCCAATGGCACCCCAGGGCTGCAGATGCTGGAAAGCAACGTCATGATCTCCCCGGAGGTGCTGTGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS CCA 90 bp CACCTCCGGGGAGATCATGACGTTGCTTTCCAGCATCTGCAGCCCTaGGGTGCCATTGGCTTGCAGCAGGGTGTGGACCACATCTTCCAG +
Preference number: 5 (lower is better)
Translates to: HLRGDHDVAFQHLQP*GAIGLQQGVDHIFQ
Trigger: CTGGAAGATGTGGTCCACACCCTGCTGCAAGCCAATGGCACCCCAGGGCTGCAGATGCTGGAAAGCAACGTCATGATCTCCCCGGAGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CAA 90 bp AAATCAGGCACAGGTCTCCCTCATGTGACCCCTCCAAGGCAGGCAGTCTTTTCCCTGACCTTGAGGCCATaGACGGCGGGCCCAGTGGAC +
Preference number: 5 (lower is better)
Translates to: KSGTGLPHVTPPRQAVFSLTLRP*TAGPVD
Trigger: GTCCACTGGGCCCGCCGTCAATGGCCTCAAGGTCAG...GGAAAAGACTGCCTGCCTTGGAGGGGTCACATGAGGGAGACCTGTGCCTGATTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CAA 90 bp CCTGGCAGTCACCACTGGCAAGCTCAGTGCAATATGGGTAGCTACGGGATTGATCCCGAGTCCTGCGGCTaGTGCACGGACTCCGGTTGC +
Preference number: 5 (lower is better)
Translates to: PGSHHWQAQCNMGSYGIDPESCG*CTDSGC
Trigger: GCAACCGGAGTCCGTGCACAAGCCGCAGGACTCGGG...ATCAATCCCGTAGCTACCCATATTGCACTGAGCTTGCCAGTGGTGACTGCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CAA 90 bp CGGCTTCCCAGATCACAAGCTCATCTGGCACACGGCAGAAGACGACAGCCAAAGCCCACCTCCTTGAGCTaGCTGCGGAAGCCGTTCCTG +
Preference number: 5 (lower is better)
Translates to: RLPRSQAHLAHGRRRQPKPTSLS*LRKPFL
Trigger: CAGGAACGGCTTCCGCAGCAAGCTCAAGGAGGTGGG...CTTTGGCTGTCGTCTTCTGCCGTGTGCCAGATGAGCTTGTGATCTGGGAAGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CAA 90 bp CAGATCACAAGCTCATCTGGCACACGGCAGAAGACGACAGCCAAAGCAAAGCCAGCCTGGCCCACCTCCTaGAGCTTGCTGCGGAAGCCG +
Preference number: 5 (lower is better)
Translates to: QITSSSGTRQKTTAKAKPAWPTS*SLLRKP
Trigger: CGGCTTCCGCAGCAAGCTCAAGGAGGTGGGCCAGGC...TGGCTTTGCTTTGGCTGTCGTCTTCTGCCGTGTGCCAGATGAGCTTGTGATCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CAA 90 bp CGGCTTCCCAGATCACAAGCTCATCTGGCACACGGCAGAAGACGACAGCCAAAGTGGGGTGCCATTGGCTaGCAGCAGGGTGTGGACCAC +
Preference number: 5 (lower is better)
Translates to: RLPRSQAHLAHGRRRQPKWGAIG*QQGVDH
Trigger: GTGGTCCACACCCTGCTGCAAGCCAATGGCACCCCA...CTTTGGCTGTCGTCTTCTGCCGTGTGCCAGATGAGCTTGTGATCTGGGAAGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CAA 90 bp AAATCAGGCACAGGTCTCCCTCATGTGACCCCTCCAAGGCAGGCAGTCTTTTCCAGCCCTGGGGTGCCATaGGCTTGCAGCAGGGTGTGG +
Preference number: 5 (lower is better)
Translates to: KSGTGLPHVTPPRQAVFSSPGVP*ACSRVW
Trigger: CCACACCCTGCTGCAAGCCAATGGCACCCCAGGGCT...GGAAAAGACTGCCTGCCTTGGAGGGGTCACATGAGGGAGACCTGTGCCTGATTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS TCA 90 bp GCAGTCCGGGTTTGGTTTCTTTCCCTTTCCACGACCAAGCGCTGCTaGGAGCCCACCGACGTCAGCAGCTGGAAGTTCACACGGACTCAG +
Preference number: 5 (lower is better)
Translates to: AVRVWFLSLSTTKRC*EPTDVSSWKFTRTQ
Trigger: CTGAGTCCGTGTGAACTTCCAGCTGCTGACGTCGGTGGGCTCTCAGCAGCGCTTGGTCGTGGAAAGGGAAAGAAACCAAACCCGGACTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474854.1
CDS GCA 90 bp GACACAAAGGATCCCGGGAAGCAGACGACAAACTGGCCACTCTGCTaGACGGTCCTGTGCACCTTGATCCCCTCTTTGCACAGCACCTCC +
Preference number: 5 (lower is better)
Translates to: DTKDPGKQTTNWPLC*TVLCTLIPSLHSTS
Trigger: GGAGGTGCTGTGCAAAGAGGGGATCAAGGTGCACAGGACCGTGCAGCAGAGTGGCCAGTTTGTCGTCTGCTTCCCGGGATCCTTTGTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CAA 90 bp GGATTTCCTAATGAAATCAGGCACAGGTCTCCCTCATGTGACCCCTCCAAGGCAGTGGCAGCAAGCCCCTaGGCCGAGGAACCCGTGGAG +
Preference number: 5 (lower is better)
Translates to: GFPNEIRHRSPSCDPSKAVAASP*AEEPVE
Trigger: CTCCACGGGTTCCTCGGCCAAGGGGCTTGCTGCCAC...TGCCTTGGAGGGGTCACATGAGGGAGACCTGTGCCTGATTTCATTAGGAAATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CAA 90 bp CAGATCACAAGCTCATCTGGCACACGGCAGAAGACGACAGCCAAAGCAAAGCCACTGACCTTGAGGCCATaGACGGCGGGCCCAGTGGAC +
Preference number: 5 (lower is better)
Translates to: QITSSSGTRQKTTAKAKPLTLRP*TAGPVD
Trigger: GTCCACTGGGCCCGCCGTCAATGGCCTCAAGGTCAG...TGGCTTTGCTTTGGCTGTCGTCTTCTGCCGTGTGCCAGATGAGCTTGTGATCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CAA 90 bp ACCAACAAAGTGGATCATAGGACGTTCCTGGCAGTCACCACTGGCAAGCTCAGTCCCGAGTCCTGCGGCTaGTGCACGGACTCCGGTTGC +
Preference number: 5 (lower is better)
Translates to: TNKVDHRTFLAVTTGKLSPESCG*CTDSGC
Trigger: GCAACCGGAGTCCGTGCACAAGCCGCAGGACTCGGG...ACTGAGCTTGCCAGTGGTGACTGCCAGGAACGTCCTATGATCCACTTTGTTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CAA 90 bp CGGCTTCCCAGATCACAAGCTCATCTGGCACACGGCAGAAGACGACAGCCAAAGATCTCATCGTTGAGCTaGCACTCGGGCCGCCAGTCC +
Preference number: 5 (lower is better)
Translates to: RLPRSQAHLAHGRRRQPKISSLS*HSGRQS
Trigger: GGACTGGCGGCCCGAGTGCAAGCTCAACGATGAGAT...CTTTGGCTGTCGTCTTCTGCCGTGTGCCAGATGAGCTTGTGATCTGGGAAGCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CAA 90 bp AAATCAGGCACAGGTCTCCCTCATGTGACCCCTCCAAGGCAGGCAGTCTTTTCCTGGGGTGCCATTGGCTaGCAGCAGGGTGTGGACCAC +
Preference number: 5 (lower is better)
Translates to: KSGTGLPHVTPPRQAVFSWGAIG*QQGVDH
Trigger: GTGGTCCACACCCTGCTGCAAGCCAATGGCACCCCA...GGAAAAGACTGCCTGCCTTGGAGGGGTCACATGAGGGAGACCTGTGCCTGATTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CAA 90 bp CAGATCACAAGCTCATCTGGCACACGGCAGAAGACGACAGCCAAAGCAAAGCCAAGCCCTGGGGTGCCATaGGCTTGCAGCAGGGTGTGG +
Preference number: 5 (lower is better)
Translates to: QITSSSGTRQKTTAKAKPSPGVP*ACSRVW
Trigger: CCACACCCTGCTGCAAGCCAATGGCACCCCAGGGCT...TGGCTTTGCTTTGGCTGTCGTCTTCTGCCGTGTGCCAGATGAGCTTGTGATCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS GCA 90 bp TTGGACACAAAGGATCCCGGGAAGCAGACGACAAACTGGCCACTCTaGTGCACGGTCCTGTGCACCTTGATCCCCTCTTTGCACAGCACC +
Preference number: 5 (lower is better)
Translates to: LDTKDPGKQTTNWPL*CTVLCTLIPSLHST
Trigger: GGTGCTGTGCAAAGAGGGGATCAAGGTGCACAGGACCGTGCAGCAGAGTGGCCAGTTTGTCGTCTGCTTCCCGGGATCCTTTGTGTCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CAA 90 bp AGGCAGTCTTTTCCGTCTTCCTCGCTCGCTTTTCTTCTTTCCTGGAACAGATGCGTGGCAGCAAGCCCCTaGGCCGAGGAACCCGTGGAG +
Preference number: 5 (lower is better)
Translates to: RQSFPSSSLAFLLSWNRCVAASP*AEEPVE
Trigger: CTCCACGGGTTCCTCGGCCAAGGGGCTTGCTGCCAC...GCATCTGTTCCAGGAAAGAAGAAAAGCGAGCGAGGAAGACGGAAAAGACTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CAA 90 bp CAGATCACAAGCTCATCTGGCACACGGCAGAAGACGACAGCCAAAGCAAAGCCAAACCTGCCACTGACCTaGAGGCCATTGACGGCGGGC +
Preference number: 5 (lower is better)
Translates to: QITSSSGTRQKTTAKAKPNLPLT*RPLTAG
Trigger: GCCCGCCGTCAATGGCCTCAAGGTCAGTGGCAGGTT...TGGCTTTGCTTTGGCTGTCGTCTTCTGCCGTGTGCCAGATGAGCTTGTGATCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CAA 90 bp GGATTTCCTAATGAAATCAGGCACAGGTCTCCCTCATGTGACCCCTCCAAGGCAGGATCGTGGAACTCCTaGGCGGAGGGCCTGAGGACG +
Preference number: 5 (lower is better)
Translates to: GFPNEIRHRSPSCDPSKAGSWNS*AEGLRT
Trigger: CGTCCTCAGGCCCTCCGCCAAGGAGTTCCACGATCC...TGCCTTGGAGGGGTCACATGAGGGAGACCTGTGCCTGATTTCATTAGGAAATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CAA 90 bp CAAGCTCATCTGGCACACGGCAGAAGACGACAGCCAAAGCAAAGCCATTTCAAGGGATCGTGGAACTCCTaGGCGGAGGGCCTGAGGACG +
Preference number: 5 (lower is better)
Translates to: QAHLAHGRRRQPKQSHFKGSWNS*AEGLRT
Trigger: CGTCCTCAGGCCCTCCGCCAAGGAGTTCCACGATCC...CTTGAAATGGCTTTGCTTTGGCTGTCGTCTTCTGCCGTGTGCCAGATGAGCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CAA 90 bp GGATTTCCTAATGAAATCAGGCACAGGTCTCCCTCATGTGACCCCTCCAAGGCACCTTCCAGCGGCCCCTaGCGCTTCTCCAGGATCTCC +
Preference number: 5 (lower is better)
Translates to: GFPNEIRHRSPSCDPSKAPSSGP*RFSRIS
Trigger: GGAGATCCTGGAGAAGCGCAAGGGGCCGCTGGAAGG...TGCCTTGGAGGGGTCACATGAGGGAGACCTGTGCCTGATTTCATTAGGAAATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CAA 90 bp CGGCTTCCCAGATCACAAGCTCATCTGGCACACGGCAGAAGACGACAGCCAAAGGGCAGAGGGTGGAACTaGTGGTGGTCGTTCTCTGTG +
Preference number: 5 (lower is better)
Translates to: RLPRSQAHLAHGRRRQPKGRGWN*WWSFSV
Trigger: CACAGAGAACGACCACCACAAGTTCCACCCTCTGCC...CTTTGGCTGTCGTCTTCTGCCGTGTGCCAGATGAGCTTGTGATCTGGGAAGCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CAA 90 bp AAATCAGGCACAGGTCTCCCTCATGTGACCCCTCCAAGGCAGGCAGTCTTTTCCTGGATGAGCCCATTCTaGGGCTCGAAGCGGGGCAGA +
Preference number: 5 (lower is better)
Translates to: KSGTGLPHVTPPRQAVFSWMSPF*GSKRGR
Trigger: TCTGCCCCGCTTCGAGCCCAAGAATGGGCTCATCCA...GGAAAAGACTGCCTGCCTTGGAGGGGTCACATGAGGGAGACCTGTGCCTGATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CAA 90 bp CCTGGCAGTCACCACTGGCAAGCTCAGTGCAATATGGGTAGCTACGGGATTGATGTGTTGGTGTCCACCTaGCCGCAGTGCACTGCCACG +
Preference number: 5 (lower is better)
Translates to: PGSHHWQAQCNMGSYGIDVLVST*PQCTAT
Trigger: CGTGGCAGTGCACTGCGGCAAGGTGGACACCAACAC...ATCAATCCCGTAGCTACCCATATTGCACTGAGCTTGCCAGTGGTGACTGCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS TCA 90 bp TGCCTCGAAAAGGGTTCTGATTTTCCTACTGGGAATCCACTGCCGTaGGTGTTGGTGTCCACCTTGCCGCAGTGCACTGCCACGTGGCAG +
Preference number: 5 (lower is better)
Translates to: CLEKGSDFPTGNPLP*VLVSTLPQCTATWQ
Trigger: CTGCCACGTGGCAGTGCACTGCGGCAAGGTGGACACCAACACTCACGGCAGTGGATTCCCAGTAGGAAAATCAGAACCCTTTTCGAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341776.7
ENST00000397311.4
ENST00000474854.1
CDS GCA 90 bp ATGACGTTGCTTTCCAGCATCTGCAGCCCTGGGGTGCCATTGGCTTaGAGCAGGGTGTGGACCACATCTTCCAGCTTGTTCTCCTCCTCA +
Preference number: 5 (lower is better)
Translates to: MTLLSSICSPGVPLA*SRVWTTSSSLFSSS
Trigger: TGAGGAGGAGAACAAGCTGGAAGATGTGGTCCACACCCTGCTGCAAGCCAATGGCACCCCAGGGCTGCAGATGCTGGAAAGCAACGTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS CCA 90 bp GGCGGCTGTCAGCCCGGTGATCGCTGTGCTTCTCCTTTGCGGGAGTaGCCTCTTTGCTTTTGTGTTTTTGAACAGGTTCCTTCTCCCGTG +
Preference number: 5 (lower is better)
Translates to: GGCQPGDRCASPLRE*PLCFCVFEQVPSPV
Trigger: CACGGGAGAAGGAACCTGTTCAAAAACACAAAAGCAAAGAGGCCACTCCCGCAAAGGAGAAGCACAGCGATCACCGGGCTGACAGCCGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS CCA 90 bp CAGCACACTTTGGACACAAAGGATCCCGGGAAGCAGACGACAAACTaGCCACTCTGCTGCACGGTCCTGTGCACCTTGATCCCCTCTTTG +
Preference number: 5 (lower is better)
Translates to: QHTLDTKDPGKQTTN*PLCCTVLCTLIPSL
Trigger: CAAAGAGGGGATCAAGGTGCACAGGACCGTGCAGCAGAGTGGCCAGTTTGTCGTCTGCTTCCCGGGATCCTTTGTGTCCAAAGTGTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CAA 90 bp CAGATCACAAGCTCATCTGGCACACGGCAGAAGACGACAGCCAAAGCAAAGCCACGCTGTGCTTCTCCTTaGCGGGAGTGGCCTCTTTGC +
Preference number: 5 (lower is better)
Translates to: QITSSSGTRQKTTAKAKPRCASP*REWPLC
Trigger: GCAAAGAGGCCACTCCCGCAAAGGAGAAGCACAGCG...TGGCTTTGCTTTGGCTGTCGTCTTCTGCCGTGTGCCAGATGAGCTTGTGATCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CAA 90 bp CAGATCACAAGCTCATCTGGCACACGGCAGAAGACGACAGCCAAAGCAAAGCCATCTTCCAGTCTCCTCTaGGAGTTCCGCAGCCCCTCC +
Preference number: 5 (lower is better)
Translates to: QITSSSGTRQKTTAKAKPSSSLL*EFRSPS
Trigger: GGAGGGGCTGCGGAACTCCAAGAGGAGACTGGAAGA...TGGCTTTGCTTTGGCTGTCGTCTTCTGCCGTGTGCCAGATGAGCTTGTGATCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CAA 90 bp CCTGGCAGTCACCACTGGCAAGCTCAGTGCAATATGGGTAGCTACGGGATTGATCGCCTTGCCATGTGCTaGTCTGCCTGGCGTGCTCTT +
Preference number: 5 (lower is better)
Translates to: PGSHHWQAQCNMGSYGIDRLAMC*SAWRAL
Trigger: AAGAGCACGCCAGGCAGACAAGCACATGGCAAGGCG...ATCAATCCCGTAGCTACCCATATTGCACTGAGCTTGCCAGTGGTGACTGCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CAA 90 bp TTCCTGGCAGTCACCACTGGCAAGCTCAGTGCAATATGGGTAGCTACGGGATTGCGCCTTGCCATGTGCTaGTCTGCCTGGCGTGCTCTT +
Preference number: 5 (lower is better)
Translates to: FLAVTTGKLSAIWVATGLRLAMC*SAWRAL
Trigger: AAGAGCACGCCAGGCAGACAAGCACATGGCAAGGCG...CAATCCCGTAGCTACCCATATTGCACTGAGCTTGCCAGTGGTGACTGCCAGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CAA 90 bp CCTGGCAGTCACCACTGGCAAGCTCAGTGCAATATGGGTAGCTACGGGATTGATAACCGCATCTCATCGTaGAGCTTGCACTCGGGCCGC +
Preference number: 5 (lower is better)
Translates to: PGSHHWQAQCNMGSYGIDNRISS*SLHSGR
Trigger: GCGGCCCGAGTGCAAGCTCAACGATGAGATGCGGTT...ATCAATCCCGTAGCTACCCATATTGCACTGAGCTTGCCAGTGGTGACTGCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CAA 90 bp CAAGCTCATCTGGCACACGGCAGAAGACGACAGCCAAAGCAAAGCCATTTCAAGGTGTTGGTGTCCACCTaGCCGCAGTGCACTGCCACG +
Preference number: 5 (lower is better)
Translates to: QAHLAHGRRRQPKQSHFKVLVST*PQCTAT
Trigger: CGTGGCAGTGCACTGCGGCAAGGTGGACACCAACAC...CTTGAAATGGCTTTGCTTTGGCTGTCGTCTTCTGCCGTGTGCCAGATGAGCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CAA 90 bp CGCTCCCGTCTCCTCGTTCCACCTATGGTTAGGAAACAACGTCCGCCTTCAGCTTACCCACAGCACACTTaGGACACAAAGGATCCCGGG +
Preference number: 5 (lower is better)
Translates to: RSRLLVPPMVRKQRPPSAYPQHT*DTKDPG
Trigger: CCCGGGATCCTTTGTGTCCAAAGTGTGCTGTGGGTA...AGCTGAAGGCGGACGTTGTTTCCTAACCATAGGTGGAACGAGGAGACGGGAGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CAA 90 bp CGCTCCCGTCTCCTCGTTCCACCTATGGTTAGGAAACAACGTCCGCCTTCAGCTACCTCGCGCATCTTTTaGGCACTGGTTACACCTGCA +
Preference number: 5 (lower is better)
Translates to: RSRLLVPPMVRKQRPPSATSRIF*ALVTPA
Trigger: TGCAGGTGTAACCAGTGCCAAAAAGATGCGCGAGGT...AGCTGAAGGCGGACGTTGTTTCCTAACCATAGGTGGAACGAGGAGACGGGAGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CAA 90 bp GGATTTCCTAATGAAATCAGGCACAGGTCTCCCTCATGTGACCCCTCCAAGGCATCTTCCAGTCTCCTCTaGGAGTTCCGCAGCCCCTCC +
Preference number: 5 (lower is better)
Translates to: GFPNEIRHRSPSCDPSKASSSLL*EFRSPS
Trigger: GGAGGGGCTGCGGAACTCCAAGAGGAGACTGGAAGA...TGCCTTGGAGGGGTCACATGAGGGAGACCTGTGCCTGATTTCATTAGGAAATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CAA 90 bp GCCATAGAAACCGGACAACCACATTGGAAAACACTTGACTGTTTCTGTAATTGTTCGGCCGGGGCCTTCTaGCCAGGGCCTTCGGCGGGG +
Preference number: 5 (lower is better)
Translates to: AIETGQPHWKTLDCFCNCSAGAF*PGPSAG
Trigger: CCCCGCCGAAGGCCCTGGCAAGAAGGCCCCGGCCGA...ACAATTACAGAAACAGTCAAGTGTTTTCCAATGTGGTTGTCCGGTTTCTATGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CAA 90 bp CAAGCTCATCTGGCACACGGCAGAAGACGACAGCCAAAGCAAAGCCATTTCAAGAACCGCATCTCATCGTaGAGCTTGCACTCGGGCCGC +
Preference number: 5 (lower is better)
Translates to: QAHLAHGRRRQPKQSHFKNRISS*SLHSGR
Trigger: GCGGCCCGAGTGCAAGCTCAACGATGAGATGCGGTT...CTTGAAATGGCTTTGCTTTGGCTGTCGTCTTCTGCCGTGTGCCAGATGAGCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CAA 90 bp CAGATCACAAGCTCATCTGGCACACGGCAGAAGACGACAGCCAAAGCAAAGCCAGATTTGAGGTGCTTCTaGATGCAGGCCAGCCGCTGC +
Preference number: 5 (lower is better)
Translates to: QITSSSGTRQKTTAKAKPDLRCF*MQASRC
Trigger: GCAGCGGCTGGCCTGCATCAAGAAGCACCTCAAATC...TGGCTTTGCTTTGGCTGTCGTCTTCTGCCGTGTGCCAGATGAGCTTGTGATCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CAA 90 bp CTTCTGCAACAACAACCAACAAAGTGGATCATAGGACGTTCCTGGCAGTCACCACCTTCCAGCGGCCCCTaGCGCTTCTCCAGGATCTCC +
Preference number: 5 (lower is better)
Translates to: LLQQQPTKWIIGRSWQSPPSSGP*RFSRIS
Trigger: GGAGATCCTGGAGAAGCGCAAGGGGCCGCTGGAAGG...TGGTGACTGCCAGGAACGTCCTATGATCCACTTTGTTGGTTGTTGTTGCAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CAA 90 bp TTCCTGGCAGTCACCACTGGCAAGCTCAGTGCAATATGGGTAGCTACGGGATTGGGCAGAGGGTGGAACTaGTGGTGGTCGTTCTCTGTG +
Preference number: 5 (lower is better)
Translates to: FLAVTTGKLSAIWVATGLGRGWN*WWSFSV
Trigger: CACAGAGAACGACCACCACAAGTTCCACCCTCTGCC...CAATCCCGTAGCTACCCATATTGCACTGAGCTTGCCAGTGGTGACTGCCAGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CAA 90 bp CAAGCTCATCTGGCACACGGCAGAAGACGACAGCCAAAGCAAAGCCATTTCAAGTGGATGAGCCCATTCTaGGGCTCGAAGCGGGGCAGA +
Preference number: 5 (lower is better)
Translates to: QAHLAHGRRRQPKQSHFKWMSPF*GSKRGR
Trigger: TCTGCCCCGCTTCGAGCCCAAGAATGGGCTCATCCA...CTTGAAATGGCTTTGCTTTGGCTGTCGTCTTCTGCCGTGTGCCAGATGAGCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS GCA 90 bp CAGCCCGGTGATCGCTGTGCTTCTCCTTTGCGGGAGTGGCCTCTTTaGTTTTGTGTTTTTGAACAGGTTCCTTCTCCCGTGTTGACCTGC +
Preference number: 5 (lower is better)
Translates to: QPGDRCASPLREWPL*FCVFEQVPSPVLTC
Trigger: GCAGGTCAACACGGGAGAAGGAACCTGTTCAAAAACACAAAAGCAAAGAGGCCACTCCCGCAAAGGAGAAGCACAGCGATCACCGGGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS GCA 90 bp ATCCATGCCTCGAAAAGGGTTCTGATTTTCCTACTGGGAATCCACTaGCGTGAGTGTTGGTGTCCACCTTGCCGCAGTGCACTGCCACGT +
Preference number: 5 (lower is better)
Translates to: IHASKRVLIFLLGIH*RECWCPPCRSALPR
Trigger: ACGTGGCAGTGCACTGCGGCAAGGTGGACACCAACACTCACGGCAGTGGATTCCCAGTAGGAAAATCAGAACCCTTTTCGAGGCATGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341776.7
ENST00000397311.4
ENST00000474854.1
CDS CCA 90 bp AAAAGGGTTCTGATTTTCCTACTGGGAATCCACTGCCGTGAGTGTTaGTGTCCACCTTGCCGCAGTGCACTGCCACGTGGCAGTCCTTCT +
Preference number: 5 (lower is better)
Translates to: KRVLIFLLGIHCREC*CPPCRSALPRGSPS
Trigger: AGAAGGACTGCCACGTGGCAGTGCACTGCGGCAAGGTGGACACCAACACTCACGGCAGTGGATTCCCAGTAGGAAAATCAGAACCCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341776.7
ENST00000397311.4
ENST00000474854.1
CDS CCA 90 bp CGGTACATCAACTTCAGCCCTCGGCAGGACTTCTGTTTCTCCACGTaGCGCAGAGCACACTCCAGACAGAACACGACGTTTTCGTTCTCT +
Preference number: 5 (lower is better)
Translates to: RYINFSPRQDFCFST*RRAHSRQNTTFSFS
Trigger: AGAGAACGAAAACGTCGTGTTCTGTCTGGAGTGTGCTCTGCGCCACGTGGAGAAACAGAAGTCCTGCCGAGGGCTGAAGTTGATGTACCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CAA 90 bp AAATCAGGCACAGGTCTCCCTCATGTGACCCCTCCAAGGCAGGCAGTCTTTTCCAGTTCTCTCTTGGCTTaGGTGTATGTGACAGCCCCC +
Preference number: 5 (lower is better)
Translates to: KSGTGLPHVTPPRQAVFSSSLLA*VYVTAP
Trigger: GGGGGCTGTCACATACACCAAAGCCAAGAGAGAACT...GGAAAAGACTGCCTGCCTTGGAGGGGTCACATGAGGGAGACCTGTGCCTGATTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CAA 90 bp CGGCTTCCCAGATCACAAGCTCATCTGGCACACGGCAGAAGACGACAGCCAAAGTTGGGTTTGGTGTCCTaGACCAGTTCTCTCTTGGCT +
Preference number: 5 (lower is better)
Translates to: RLPRSQAHLAHGRRRQPKLGLVS*TSSLLA
Trigger: AGCCAAGAGAGAACTGGTCAAGGACACCAAACCCAA...CTTTGGCTGTCGTCTTCTGCCGTGTGCCAGATGAGCTTGTGATCTGGGAAGCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CAA 90 bp TTCCTGGCAGTCACCACTGGCAAGCTCAGTGCAATATGGGTAGCTACGGGATTGGTGCACGGACTCCGGTaGCGAGGTAGAACGATTTTC +
Preference number: 5 (lower is better)
Translates to: FLAVTTGKLSAIWVATGLVHGLR*RGRTIF
Trigger: GAAAATCGTTCTACCTCGCAACCGGAGTCCGTGCAC...CAATCCCGTAGCTACCCATATTGCACTGAGCTTGCCAGTGGTGACTGCCAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CAA 90 bp CCTGGCAGTCACCACTGGCAAGCTCAGTGCAATATGGGTAGCTACGGGATTGATTTTGAGGTCAGTCACTaGCTGCATGCCGCCCATCTC +
Preference number: 5 (lower is better)
Translates to: PGSHHWQAQCNMGSYGIDFEVSH*LHAAHL
Trigger: GAGATGGGCGGCATGCAGCAAGTGACTGACCTCAAA...ATCAATCCCGTAGCTACCCATATTGCACTGAGCTTGCCAGTGGTGACTGCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CAA 90 bp TTCCTGGCAGTCACCACTGGCAAGCTCAGTGCAATATGGGTAGCTACGGGATTGTTTGAGGTCAGTCACTaGCTGCATGCCGCCCATCTC +
Preference number: 5 (lower is better)
Translates to: FLAVTTGKLSAIWVATGLFEVSH*LHAAHL
Trigger: GAGATGGGCGGCATGCAGCAAGTGACTGACCTCAAA...CAATCCCGTAGCTACCCATATTGCACTGAGCTTGCCAGTGGTGACTGCCAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CAA 90 bp CAAGCTCATCTGGCACACGGCAGAAGACGACAGCCAAAGCAAAGCCATTTCAAGGCTGGGGCAGGCTCCTaGCTGAAACACATGCTCATG +
Preference number: 5 (lower is better)
Translates to: QAHLAHGRRRQPKQSHFKAGAGS*LKHMLM
Trigger: CATGAGCATGTGTTTCAGCAAGGAGCCTGCCCCAGC...CTTGAAATGGCTTTGCTTTGGCTGTCGTCTTCTGCCGTGTGCCAGATGAGCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CAA 90 bp CAGATCACAAGCTCATCTGGCACACGGCAGAAGACGACAGCCAAAGCAAAGCCAATGGACCCTGTGTTATaGGGGAGGACGGTGAGGTTC +
Preference number: 5 (lower is better)
Translates to: QITSSSGTRQKTTAKAKPMDPVL*GRTVRF
Trigger: GAACCTCACCGTCCTCCCCAATAACACAGGGTCCAT...TGGCTTTGCTTTGGCTGTCGTCTTCTGCCGTGTGCCAGATGAGCTTGTGATCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CAA 90 bp GGATTTCCTAATGAAATCAGGCACAGGTCTCCCTCATGTGACCCCTCCAAGGCAACGGTCCTGTGCACCTaGATCCCCTCTTTGCACAGC +
Preference number: 5 (lower is better)
Translates to: GFPNEIRHRSPSCDPSKATVLCT*IPSLHS
Trigger: GCTGTGCAAAGAGGGGATCAAGGTGCACAGGACCGT...TGCCTTGGAGGGGTCACATGAGGGAGACCTGTGCCTGATTTCATTAGGAAATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CAA 90 bp AAATCAGGCACAGGTCTCCCTCATGTGACCCCTCCAAGGCAGGCAGTCTTTTCCCGACGCTTCATTTCCTaGGCGGTCTCAAAGCCCATA +
Preference number: 5 (lower is better)
Translates to: KSGTGLPHVTPPRQAVFSRRFIS*AVSKPI
Trigger: TATGGGCTTTGAGACCGCCAAGGAAATGAAGCGTCG...GGAAAAGACTGCCTGCCTTGGAGGGGTCACATGAGGGAGACCTGTGCCTGATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CAA 90 bp TTCCTGGCAGTCACCACTGGCAAGCTCAGTGCAATATGGGTAGCTACGGGATTGTCCACTGTCGCTCTCTaGCGGGGACCTCTTTTTGGT +
Preference number: 5 (lower is better)
Translates to: FLAVTTGKLSAIWVATGLSTVAL*RGPLFG
Trigger: ACCAAAAAGAGGTCCCCGCAAGAGAGCGACAGTGGA...CAATCCCGTAGCTACCCATATTGCACTGAGCTTGCCAGTGGTGACTGCCAGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CAA 90 bp CCTGGCAGTCACCACTGGCAAGCTCAGTGCAATATGGGTAGCTACGGGATTGATTCCACTGTCGCTCTCTaGCGGGGACCTCTTTTTGGT +
Preference number: 5 (lower is better)
Translates to: PGSHHWQAQCNMGSYGIDSTVAL*RGPLFG
Trigger: ACCAAAAAGAGGTCCCCGCAAGAGAGCGACAGTGGA...ATCAATCCCGTAGCTACCCATATTGCACTGAGCTTGCCAGTGGTGACTGCCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS GCA 90 bp TTGGCGGTCTCAAAGCCCATACTTGTCCACTGGGTGGTAGCAAAGTaGACGGTTTCAGACACGCTGTACCCACAGCACACTTTGGACACA +
Preference number: 5 (lower is better)
Translates to: LAVSKPILVHWVVAK*TVSDTLYPQHTLDT
Trigger: TGTGTCCAAAGTGTGCTGTGGGTACAGCGTGTCTGAAACCGTGCACTTTGCTACCACCCAGTGGACAAGTATGGGCTTTGAGACCGCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CAA 90 bp TTCCTGGCAGTCACCACTGGCAAGCTCAGTGCAATATGGGTAGCTACGGGATTGGCTAGTGGAGGACACTaGGGATGCATCGTCCTTTTC +
Preference number: 5 (lower is better)
Translates to: FLAVTTGKLSAIWVATGLASGGH*GCIVLF
Trigger: GAAAAGGACGATGCATCCCAAGTGTCCTCCACTAGC...CAATCCCGTAGCTACCCATATTGCACTGAGCTTGCCAGTGGTGACTGCCAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CAA 90 bp CGGCTTCCCAGATCACAAGCTCATCTGGCACACGGCAGAAGACGACAGCCAAAGGTGTACTTCACAGTTTaGGATGGTGAAGGTCTGACC +
Preference number: 5 (lower is better)
Translates to: RLPRSQAHLAHGRRRQPKVYFTV*DGEGLT
Trigger: GGTCAGACCTTCACCATCCAAAACTGTGAAGTACAC...CTTTGGCTGTCGTCTTCTGCCGTGTGCCAGATGAGCTTGTGATCTGGGAAGCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CAA 90 bp CAGATCACAAGCTCATCTGGCACACGGCAGAAGACGACAGCCAAAGCAAAGCCAAGTTCTCTCTTGGCTTaGGTGTATGTGACAGCCCCC +
Preference number: 5 (lower is better)
Translates to: QITSSSGTRQKTTAKAKPSSLLA*VYVTAP
Trigger: GGGGGCTGTCACATACACCAAAGCCAAGAGAGAACT...TGGCTTTGCTTTGGCTGTCGTCTTCTGCCGTGTGCCAGATGAGCTTGTGATCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CAA 90 bp GGATTTCCTAATGAAATCAGGCACAGGTCTCCCTCATGTGACCCCTCCAAGGCAGTGCACGGACTCCGGTaGCGAGGTAGAACGATTTTC +
Preference number: 5 (lower is better)
Translates to: GFPNEIRHRSPSCDPSKAVHGLR*RGRTIF
Trigger: GAAAATCGTTCTACCTCGCAACCGGAGTCCGTGCAC...TGCCTTGGAGGGGTCACATGAGGGAGACCTGTGCCTGATTTCATTAGGAAATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CAA 90 bp ACCAACAAAGTGGATCATAGGACGTTCCTGGCAGTCACCACTGGCAAGCTCAGTATGGACCCTGTGTTATaGGGGAGGACGGTGAGGTTC +
Preference number: 5 (lower is better)
Translates to: TNKVDHRTFLAVTTGKLSMDPVL*GRTVRF
Trigger: GAACCTCACCGTCCTCCCCAATAACACAGGGTCCAT...ACTGAGCTTGCCAGTGGTGACTGCCAGGAACGTCCTATGATCCACTTTGTTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CAA 90 bp CAGATCACAAGCTCATCTGGCACACGGCAGAAGACGACAGCCAAAGCAAAGCCACGACGCTTCATTTCCTaGGCGGTCTCAAAGCCCATA +
Preference number: 5 (lower is better)
Translates to: QITSSSGTRQKTTAKAKPRRFIS*AVSKPI
Trigger: TATGGGCTTTGAGACCGCCAAGGAAATGAAGCGTCG...TGGCTTTGCTTTGGCTGTCGTCTTCTGCCGTGTGCCAGATGAGCTTGTGATCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS TCA 90 bp CTCCTTCAGAGACAAATAAAGGACTTTACGTACCACCCGTTCTTCTaGCCACGGAATCCCATCACTGTCATCCTGGTGGGAAGCGCGACG +
Preference number: 5 (lower is better)
Translates to: LLQRQIKDFTYHPFF*PRNPITVILVGSAT
Trigger: CGTCGCGCTTCCCACCAGGATGACAGTGATGGGATTCCGTGGTCAGAAGAACGGGTGGTACGTAAAGTCCTTTATTTGTCTCTGAAGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397311.4
CDS-3UTR CAA 90 bp CAAGCTCATCTGGCACACGGCAGAAGACGACAGCCAAAGCAAAGCCATTTCAAGACCTCGCGCATCTTTTaGGCACTGGTTACACCTGCA +
Preference number: 5 (lower is better)
Translates to: QAHLAHGRRRQPKQSHFKTSRIF*ALVTPA
Trigger: TGCAGGTGTAACCAGTGCCAAAAAGATGCGCGAGGT...CTTGAAATGGCTTTGCTTTGGCTGTCGTCTTCTGCCGTGTGCCAGATGAGCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CAA 90 bp CAGATCACAAGCTCATCTGGCACACGGCAGAAGACGACAGCCAAAGCAAAGCCATTGGGTTTGGTGTCCTaGACCAGTTCTCTCTTGGCT +
Preference number: 5 (lower is better)
Translates to: QITSSSGTRQKTTAKAKPLGLVS*TSSLLA
Trigger: AGCCAAGAGAGAACTGGTCAAGGACACCAAACCCAA...TGGCTTTGCTTTGGCTGTCGTCTTCTGCCGTGTGCCAGATGAGCTTGTGATCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CAA 90 bp TTGTTAAATATTCCAAAACAGTTCAGTCTTCTGCAACAACAACCAACAAAGTGGTCGGCCGGGGCCTTCTaGCCAGGGCCTTCGGCGGGG +
Preference number: 5 (lower is better)
Translates to: LLNIPKQFSLLQQQPTKWSAGAF*PGPSAG
Trigger: CCCCGCCGAAGGCCCTGGCAAGAAGGCCCCGGCCGA...CCACTTTGTTGGTTGTTGTTGCAGAAGACTGAACTGTTTTGGAATATTTAACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CAA 90 bp CTTCTGCAACAACAACCAACAAAGTGGATCATAGGACGTTCCTGGCAGTCACCAGATTTGAGGTGCTTCTaGATGCAGGCCAGCCGCTGC +
Preference number: 5 (lower is better)
Translates to: LLQQQPTKWIIGRSWQSPDLRCF*MQASRC
Trigger: GCAGCGGCTGGCCTGCATCAAGAAGCACCTCAAATC...TGGTGACTGCCAGGAACGTCCTATGATCCACTTTGTTGGTTGTTGTTGCAGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CAA 90 bp ACCAACAAAGTGGATCATAGGACGTTCCTGGCAGTCACCACTGGCAAGCTCAGTTCATTGAGGACGCCTTaGTCCTCCTCCTCTTCCTTG +
Preference number: 5 (lower is better)
Translates to: TNKVDHRTFLAVTTGKLSSLRTP*SSSSSL
Trigger: CAAGGAAGAGGAGGAGGACAAAGGCGTCCTCAATGA...ACTGAGCTTGCCAGTGGTGACTGCCAGGAACGTCCTATGATCCACTTTGTTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CAA 90 bp ACCAACAAAGTGGATCATAGGACGTTCCTGGCAGTCACCACTGGCAAGCTCAGTCACTTGTGGAAGTCATaGAGGACGCCTTTGTCCTCC +
Preference number: 5 (lower is better)
Translates to: TNKVDHRTFLAVTTGKLSHLWKS*RTPLSS
Trigger: GGAGGACAAAGGCGTCCTCAATGACTTCCACAAGTG...ACTGAGCTTGCCAGTGGTGACTGCCAGGAACGTCCTATGATCCACTTTGTTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CAA 90 bp GGATTTCCTAATGAAATCAGGCACAGGTCTCCCTCATGTGACCCCTCCAAGGCACACTTGTGGAAGTCATaGAGGACGCCTTTGTCCTCC +
Preference number: 5 (lower is better)
Translates to: GFPNEIRHRSPSCDPSKAHLWKS*RTPLSS
Trigger: GGAGGACAAAGGCGTCCTCAATGACTTCCACAAGTG...TGCCTTGGAGGGGTCACATGAGGGAGACCTGTGCCTGATTTCATTAGGAAATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CAA 90 bp GGATTTCCTAATGAAATCAGGCACAGGTCTCCCTCATGTGACCCCTCCAAGGCAGAGCTCGAAGCACTTTaGGATGAACTGGAGGCTGAC +
Preference number: 5 (lower is better)
Translates to: GFPNEIRHRSPSCDPSKAELEAL*DELEAD
Trigger: GTCAGCCTCCAGTTCATCCAAAAGTGCTTCGAGCTC...TGCCTTGGAGGGGTCACATGAGGGAGACCTGTGCCTGATTTCATTAGGAAATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS TCA 90 bp TGCTTGCAGCCTGGGCCTTTTCCTCGACGGCCCTTCTTCAAAATCTaGAGAACTAACATCGTTGCTAGTGGAGGACACTTGGGATGCATC +
Preference number: 5 (lower is better)
Translates to: CLQPGPFPRRPFFKI*RTNIVASGGHLGCI
Trigger: GATGCATCCCAAGTGTCCTCCACTAGCAACGATGTTAGTTCTTCAGATTTTGAAGAAGGGCCGTCGAGGAAAAGGCCCAGGCTGCAAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS TCA 90 bp GTTTTCCCTGAGATTGTGTGGTTGACAGCGGAACTGGGCTTGTGGTaGTTGGGTTTGGTGTCCTTGACCAGTTCTCTCTTGGCTTTGGTG +
Preference number: 5 (lower is better)
Translates to: VFPEIVWLTAELGLW*LGLVSLTSSLLALV
Trigger: CACCAAAGCCAAGAGAGAACTGGTCAAGGACACCAAACCCAATCACCACAAGCCCAGTTCCGCTGTCAACCACACAATCTCAGGGAAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS CCA 90 bp CTGGAGGGGGTAGCAATGGCTCCACTATCTTTACTGGAGTTGTGCTaGGACTATTCGGCTGAGACTGAGCAAACTTCCTTTGTGCTTGCA +
Preference number: 5 (lower is better)
Translates to: LEGVAMAPLSLLELC*DYSAETEQTSFVLA
Trigger: TGCAAGCACAAAGGAAGTTTGCTCAGTCTCAGCCGAATAGTCCCAGCACAACTCCAGTAAAGATAGTGGAGCCATTGCTACCCCCTCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CAA 90 bp CTTCTGCAACAACAACCAACAAAGTGGATCATAGGACGTTCCTGGCAGTCACCATGTTGGAAGTCACGTTaGTGCTGCAGCAGCAGTGCG +
Preference number: 5 (lower is better)
Translates to: LLQQQPTKWIIGRSWQSPCWKSR*CCSSSA
Trigger: CGCACTGCTGCTGCAGCACAAACGTGACTTCCAACA...TGGTGACTGCCAGGAACGTCCTATGATCCACTTTGTTGGTTGTTGTTGCAGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341776.7
CDS-3UTR CAA 90 bp CAAGCTCATCTGGCACACGGCAGAAGACGACAGCCAAAGCAAAGCCATTTCAAGAAACTTCCTTTGTGCTaGCAGCCTGGGCCTTTTCCT +
Preference number: 5 (lower is better)
Translates to: QAHLAHGRRRQPKQSHFKKLPLC*QPGPFP
Trigger: AGGAAAAGGCCCAGGCTGCAAGCACAAAGGAAGTTT...CTTGAAATGGCTTTGCTTTGGCTGTCGTCTTCTGCCGTGTGCCAGATGAGCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CAA 90 bp CGCTCCCGTCTCCTCGTTCCACCTATGGTTAGGAAACAACGTCCGCCTTCAGCTTTGCGGGTTTTTGCATaGCTACTTTCAGTTTTCCCT +
Preference number: 5 (lower is better)
Translates to: RSRLLVPPMVRKQRPPSALRVFA*LLSVFP
Trigger: AGGGAAAACTGAAAGTAGCAATGCAAAAACCCGCAA...AGCTGAAGGCGGACGTTGTTTCCTAACCATAGGTGGAACGAGGAGACGGGAGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CAA 90 bp CAGATCACAAGCTCATCTGGCACACGGCAGAAGACGACAGCCAAAGCAAAGCCAGACGTTTTCGTTCTCTaGTACCACCATGGACAGGTA +
Preference number: 5 (lower is better)
Translates to: QITSSSGTRQKTTAKAKPDVFVL*YHHGQV
Trigger: TACCTGTCCATGGTGGTACAAGAGAACGAAAACGTC...TGGCTTTGCTTTGGCTGTCGTCTTCTGCCGTGTGCCAGATGAGCTTGTGATCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CAA 90 bp TTCCTGGCAGTCACCACTGGCAAGCTCAGTGCAATATGGGTAGCTACGGGATTGGACGTTTTCGTTCTCTaGTACCACCATGGACAGGTA +
Preference number: 5 (lower is better)
Translates to: FLAVTTGKLSAIWVATGLDVFVL*YHHGQV
Trigger: TACCTGTCCATGGTGGTACAAGAGAACGAAAACGTC...CAATCCCGTAGCTACCCATATTGCACTGAGCTTGCCAGTGGTGACTGCCAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS TCA 90 bp TGGGGGTCGACTGGCATGAAGATGAAGCATTGTTGGTGGCTGTTTTaGCGTCTTCTGTCTCATCATCTTCCTCCTCGACTTCCTCCTCAT +
Preference number: 5 (lower is better)
Translates to: WGSTGMKMKHCWWLF*RLLSHHLPPRLPPH
Trigger: ATGAGGAGGAAGTCGAGGAGGAAGATGATGAGACAGAAGACGTCAAAACAGCCACCAACAATGCTTCATCTTCATGCCAGTCGACCCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CAA 90 bp TTCCTGGCAGTCACCACTGGCAAGCTCAGTGCAATATGGGTAGCTACGGGATTGCTCTTGGGTCTTTCCTaGCTCATTCTGAGATCCAAA +
Preference number: 5 (lower is better)
Translates to: FLAVTTGKLSAIWVATGLLLGLS*LILRSK
Trigger: TTTGGATCTCAGAATGAGCAAGGAAAGACCCAAGAG...CAATCCCGTAGCTACCCATATTGCACTGAGCTTGCCAGTGGTGACTGCCAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341776.7
CDS-3UTR CAA 90 bp CCTGGCAGTCACCACTGGCAAGCTCAGTGCAATATGGGTAGCTACGGGATTGATTTGACCAGTTCTCTCTaGGCTTTGGTGTATGTGACA +
Preference number: 5 (lower is better)
Translates to: PGSHHWQAQCNMGSYGIDLTSSL*ALVYVT
Trigger: TGTCACATACACCAAAGCCAAGAGAGAACTGGTCAA...ATCAATCCCGTAGCTACCCATATTGCACTGAGCTTGCCAGTGGTGACTGCCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CAA 90 bp AAATCAGGCACAGGTCTCCCTCATGTGACCCCTCCAAGGCAGGCAGTCTTTTCCCCTGTTTGCGGGTTTTaGCATTGCTACTTTCAGTTT +
Preference number: 5 (lower is better)
Translates to: KSGTGLPHVTPPRQAVFSPVCGF*HCYFQF
Trigger: AAACTGAAAGTAGCAATGCAAAAACCCGCAAACAGG...GGAAAAGACTGCCTGCCTTGGAGGGGTCACATGAGGGAGACCTGTGCCTGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CAA 90 bp GCTCAGTGCAATATGGGTAGCTACGGGATTGATGAATCCAATTATGAAACAAAGCCCACCTCCTTGAGCTaGCTGCGGAAGCCGTTCCTG +
Preference number: 5 (lower is better)
Translates to: AQCNMGSYGIDESNYETKPTSLS*LRKPFL
Trigger: CAGGAACGGCTTCCGCAGCAAGCTCAAGGAGGTGGG...CTTTGTTTCATAATTGGATTCATCAATCCCGTAGCTACCCATATTGCACTGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CAA 90 bp CTTCTGCAACAACAACCAACAAAGTGGATCATAGGACGTTCCTGGCAGTCACCATCATTGAGGACGCCTTaGTCCTCCTCCTCTTCCTTG +
Preference number: 5 (lower is better)
Translates to: LLQQQPTKWIIGRSWQSPSLRTP*SSSSSL
Trigger: CAAGGAAGAGGAGGAGGACAAAGGCGTCCTCAATGA...TGGTGACTGCCAGGAACGTCCTATGATCCACTTTGTTGGTTGTTGTTGCAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS TCA 90 bp CTGTGCTTCTCCTTTGCGGGAGTGGCCTCTTTGCTTTTGTGTTTTTaGACAGGTTCCTTCTCCCGTGTTGACCTGCTGGAACCATTGAAA +
Preference number: 5 (lower is better)
Translates to: LCFSFAGVASLLLCF*TGSFSRVDLLEPLK
Trigger: TTTCAATGGTTCCAGCAGGTCAACACGGGAGAAGGAACCTGTTCAAAAACACAAAAGCAAAGAGGCCACTCCCGCAAAGGAGAAGCACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CAA 90 bp CAAGCTCATCTGGCACACGGCAGAAGACGACAGCCAAAGCAAAGCCATTTCAAGTTGACCAGTTCTCTCTaGGCTTTGGTGTATGTGACA +
Preference number: 5 (lower is better)
Translates to: QAHLAHGRRRQPKQSHFKLTSSL*ALVYVT
Trigger: TGTCACATACACCAAAGCCAAGAGAGAACTGGTCAA...CTTGAAATGGCTTTGCTTTGGCTGTCGTCTTCTGCCGTGTGCCAGATGAGCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CAA 90 bp CAGATCACAAGCTCATCTGGCACACGGCAGAAGACGACAGCCAAAGCAAAGCCACCTGTTTGCGGGTTTTaGCATTGCTACTTTCAGTTT +
Preference number: 5 (lower is better)
Translates to: QITSSSGTRQKTTAKAKPPVCGF*HCYFQF
Trigger: AAACTGAAAGTAGCAATGCAAAAACCCGCAAACAGG...TGGCTTTGCTTTGGCTGTCGTCTTCTGCCGTGTGCCAGATGAGCTTGTGATCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CAA 90 bp AGGCAGTCTTTTCCGTCTTCCTCGCTCGCTTTTCTTCTTTCCTGGAACAGATGCAGGGATAGCACCTGTTaGCGGGTTTTTGCATTGCTA +
Preference number: 5 (lower is better)
Translates to: RQSFPSSSLAFLLSWNRCRDSTC*RVFALL
Trigger: TAGCAATGCAAAAACCCGCAAACAGGTGCTATCCCT...GCATCTGTTCCAGGAAAGAAGAAAAGCGAGCGAGGAAGACGGAAAAGACTGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CAA 90 bp GCCATAGAAACCGGACAACCACATTGGAAAACACTTGACTGTTTCTGTAATTGTATCTCATCGTTGAGCTaGCACTCGGGCCGCCAGTCC +
Preference number: 5 (lower is better)
Translates to: AIETGQPHWKTLDCFCNCISSLS*HSGRQS
Trigger: GGACTGGCGGCCCGAGTGCAAGCTCAACGATGAGAT...ACAATTACAGAAACAGTCAAGTGTTTTCCAATGTGGTTGTCCGGTTTCTATGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CAA 90 bp CGGCTTCCCAGATCACAAGCTCATCTGGCACACGGCAGAAGACGACAGCCAAAGCTGTTCGATAAAAAGTaGTTAGAGAAACAGACCTTC +
Preference number: 5 (lower is better)
Translates to: RLPRSQAHLAHGRRRQPKLFDKK*LEKQTF
Trigger: GAAGGTCTGTTTCTCTAACAACTTTTTATCGAACAG...CTTTGGCTGTCGTCTTCTGCCGTGTGCCAGATGAGCTTGTGATCTGGGAAGCCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CAA 90 bp AAATCAGGCACAGGTCTCCCTCATGTGACCCCTCCAAGGCAGGCAGTCTTTTCCGGAATGTTAGAAAGATaGCACGTCGATGACAAAGAA +
Preference number: 5 (lower is better)
Translates to: KSGTGLPHVTPPRQAVFSGMLER*HVDDKE
Trigger: TTCTTTGTCATCGACGTGCAATCTTTCTAACATTCC...GGAAAAGACTGCCTGCCTTGGAGGGGTCACATGAGGGAGACCTGTGCCTGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CAA 90 bp AAATCAGGCACAGGTCTCCCTCATGTGACCCCTCCAAGGCAGGCAGTCTTTTCCTGGGTAGCTACGGGATaGATGAATCCAATTATGAAA +
Preference number: 5 (lower is better)
Translates to: KSGTGLPHVTPPRQAVFSWVATG*MNPIMK
Trigger: TTTCATAATTGGATTCATCAATCCCGTAGCTACCCA...GGAAAAGACTGCCTGCCTTGGAGGGGTCACATGAGGGAGACCTGTGCCTGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CAA 90 bp GCTCAGTGCAATATGGGTAGCTACGGGATTGATGAATCCAATTATGAAACAAAGGCTGGGGCAGGCTCCTaGCTGAAACACATGCTCATG +
Preference number: 5 (lower is better)
Translates to: AQCNMGSYGIDESNYETKAGAGS*LKHMLM
Trigger: CATGAGCATGTGTTTCAGCAAGGAGCCTGCCCCAGC...CTTTGTTTCATAATTGGATTCATCAATCCCGTAGCTACCCATATTGCACTGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CAA 90 bp CTTCTGCAACAACAACCAACAAAGTGGATCATAGGACGTTCCTGGCAGTCACCATTGTTGGTGGCTGTTTaGACGTCTTCTGTCTCATCA +
Preference number: 5 (lower is better)
Translates to: LLQQQPTKWIIGRSWQSPLLVAV*TSSVSS
Trigger: TGATGAGACAGAAGACGTCAAAACAGCCACCAACAA...TGGTGACTGCCAGGAACGTCCTATGATCCACTTTGTTGGTTGTTGTTGCAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CAA 90 bp GCCATAGAAACCGGACAACCACATTGGAAAACACTTGACTGTTTCTGTAATTGTCCTGAGATTGTGTGGTaGACAGCGGAACTGGGCTTG +
Preference number: 5 (lower is better)
Translates to: AIETGQPHWKTLDCFCNCPEIVW*TAELGL
Trigger: CAAGCCCAGTTCCGCTGTCAACCACACAATCTCAGG...ACAATTACAGAAACAGTCAAGTGTTTTCCAATGTGGTTGTCCGGTTTCTATGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CAA 90 bp TTGTTAAATATTCCAAAACAGTTCAGTCTTCTGCAACAACAACCAACAAAGTGGAACCTGCCACTGACCTaGAGGCCATTGACGGCGGGC +
Preference number: 5 (lower is better)
Translates to: LLNIPKQFSLLQQQPTKWNLPLT*RPLTAG
Trigger: GCCCGCCGTCAATGGCCTCAAGGTCAGTGGCAGGTT...CCACTTTGTTGGTTGTTGTTGCAGAAGACTGAACTGTTTTGGAATATTTAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CAA 90 bp TGGCAAGCTCAGTGCAATATGGGTAGCTACGGGATTGATGAATCCAATTATGAAAAACTTCCTTTGTGCTaGCAGCCTGGGCCTTTTCCT +
Preference number: 5 (lower is better)
Translates to: WQAQCNMGSYGIDESNYEKLPLC*QPGPFP
Trigger: AGGAAAAGGCCCAGGCTGCAAGCACAAAGGAAGTTT...TTCATAATTGGATTCATCAATCCCGTAGCTACCCATATTGCACTGAGCTTGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CAA 90 bp TTGTTAAATATTCCAAAACAGTTCAGTCTTCTGCAACAACAACCAACAAAGTGGCGCTGTGCTTCTCCTTaGCGGGAGTGGCCTCTTTGC +
Preference number: 5 (lower is better)
Translates to: LLNIPKQFSLLQQQPTKWRCASP*REWPLC
Trigger: GCAAAGAGGCCACTCCCGCAAAGGAGAAGCACAGCG...CCACTTTGTTGGTTGTTGTTGCAGAAGACTGAACTGTTTTGGAATATTTAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CAA 90 bp TGGCAAGCTCAGTGCAATATGGGTAGCTACGGGATTGATGAATCCAATTATGAAGAAGAACTAACATCGTaGCTAGTGGAGGACACTTGG +
Preference number: 5 (lower is better)
Translates to: WQAQCNMGSYGIDESNYEEELTS*LVEDTW
Trigger: CCAAGTGTCCTCCACTAGCAACGATGTTAGTTCTTC...TTCATAATTGGATTCATCAATCCCGTAGCTACCCATATTGCACTGAGCTTGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CAA 90 bp AGGCAGTCTTTTCCGTCTTCCTCGCTCGCTTTTCTTCTTTCCTGGAACAGATGCCTGTTCGATAAAAAGTaGTTAGAGAAACAGACCTTC +
Preference number: 5 (lower is better)
Translates to: RQSFPSSSLAFLLSWNRCLFDKK*LEKQTF
Trigger: GAAGGTCTGTTTCTCTAACAACTTTTTATCGAACAG...GCATCTGTTCCAGGAAAGAAGAAAAGCGAGCGAGGAAGACGGAAAAGACTGCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS TCA 90 bp CTCCTTCAGAGACAAATAAAGGACTTTACGTACCACCCGTTCTTCTaGCCACGGAATCCCATCACTGTCATCGTATTTCTTCTGAATGAT +
Preference number: 5 (lower is better)
Translates to: LLQRQIKDFTYHPFF*PRNPITVIVFLLND
Trigger: ATCATTCAGAAGAAATACGATGACAGTGATGGGATTCCGTGGTCAGAAGAACGGGTGGTACGTAAAGTCCTTTATTTGTCTCTGAAGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341776.7
CDS CCA 90 bp TCTTCAAAATCTGAAGAACTAACATCGTTGCTAGTGGAGGACACTTaGGATGCATCGTCCTTTTCATTCTCTGACTGTTCTGATGCTGGT +
Preference number: 5 (lower is better)
Translates to: SSKSEELTSLLVEDT*DASSFSFSDCSDAG
Trigger: ACCAGCATCAGAACAGTCAGAGAATGAAAAGGACGATGCATCCCAAGTGTCCTCCACTAGCAACGATGTTAGTTCTTCAGATTTTGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CAA 90 bp GCCATAGAAACCGGACAACCACATTGGAAAACACTTGACTGTTTCTGTAATTGTGAAGAACTAACATCGTaGCTAGTGGAGGACACTTGG +
Preference number: 5 (lower is better)
Translates to: AIETGQPHWKTLDCFCNCEELTS*LVEDTW
Trigger: CCAAGTGTCCTCCACTAGCAACGATGTTAGTTCTTC...ACAATTACAGAAACAGTCAAGTGTTTTCCAATGTGGTTGTCCGGTTTCTATGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CAA 90 bp GCTCAGTGCAATATGGGTAGCTACGGGATTGATGAATCCAATTATGAAACAAAGCTATCTTTACTGGAGTaGTGCTGGGACTATTCGGCT +
Preference number: 5 (lower is better)
Translates to: AQCNMGSYGIDESNYETKLSLLE*CWDYSA
Trigger: AGCCGAATAGTCCCAGCACAACTCCAGTAAAGATAG...CTTTGTTTCATAATTGGATTCATCAATCCCGTAGCTACCCATATTGCACTGAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CAA 90 bp TTGTTAAATATTCCAAAACAGTTCAGTCTTCTGCAACAACAACCAACAAAGTGGTACCCACAGCACACTTaGGACACAAAGGATCCCGGG +
Preference number: 5 (lower is better)
Translates to: LLNIPKQFSLLQQQPTKWYPQHT*DTKDPG
Trigger: CCCGGGATCCTTTGTGTCCAAAGTGTGCTGTGGGTA...CCACTTTGTTGGTTGTTGTTGCAGAAGACTGAACTGTTTTGGAATATTTAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CAA 90 bp TTGTTAAATATTCCAAAACAGTTCAGTCTTCTGCAACAACAACCAACAAAGTGGGCTAGTGGAGGACACTaGGGATGCATCGTCCTTTTC +
Preference number: 5 (lower is better)
Translates to: LLNIPKQFSLLQQQPTKWASGGH*GCIVLF
Trigger: GAAAAGGACGATGCATCCCAAGTGTCCTCCACTAGC...CCACTTTGTTGGTTGTTGTTGCAGAAGACTGAACTGTTTTGGAATATTTAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CAA 90 bp GCCATAGAAACCGGACAACCACATTGGAAAACACTTGACTGTTTCTGTAATTGTTTGTTGGTGGCTGTTTaGACGTCTTCTGTCTCATCA +
Preference number: 5 (lower is better)
Translates to: AIETGQPHWKTLDCFCNCLLVAV*TSSVSS
Trigger: TGATGAGACAGAAGACGTCAAAACAGCCACCAACAA...ACAATTACAGAAACAGTCAAGTGTTTTCCAATGTGGTTGTCCGGTTTCTATGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CAA 90 bp TTGTTAAATATTCCAAAACAGTTCAGTCTTCTGCAACAACAACCAACAAAGTGGGAGCTCGAAGCACTTTaGGATGAACTGGAGGCTGAC +
Preference number: 5 (lower is better)
Translates to: LLNIPKQFSLLQQQPTKWELEAL*DELEAD
Trigger: GTCAGCCTCCAGTTCATCCAAAAGTGCTTCGAGCTC...CCACTTTGTTGGTTGTTGTTGCAGAAGACTGAACTGTTTTGGAATATTTAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CAA 90 bp TGGCAAGCTCAGTGCAATATGGGTAGCTACGGGATTGATGAATCCAATTATGAATGCAAAAGGGGACAATaGCTTCATGAATTTAAAGCC +
Preference number: 5 (lower is better)
Translates to: WQAQCNMGSYGIDESNYECKRGQ*LHEFKA
Trigger: GGCTTTAAATTCATGAAGCAATTGTCCCCTTTTGCA...TTCATAATTGGATTCATCAATCCCGTAGCTACCCATATTGCACTGAGCTTGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341776.7
CDS-3UTR CAA 90 bp GCCATAGAAACCGGACAACCACATTGGAAAACACTTGACTGTTTCTGTAATTGTCTCTTCTGGGAATTCTaGAACTCCTTCAGAGACAAA +
Preference number: 5 (lower is better)
Translates to: AIETGQPHWKTLDCFCNCLFWEF*NSFRDK
Trigger: TTTGTCTCTGAAGGAGTTCAAGAATTCCCAGAAGAG...ACAATTACAGAAACAGTCAAGTGTTTTCCAATGTGGTTGTCCGGTTTCTATGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CAA 90 bp TTGTTAAATATTCCAAAACAGTTCAGTCTTCTGCAACAACAACCAACAAAGTGGGTGTACTTCACAGTTTaGGATGGTGAAGGTCTGACC +
Preference number: 5 (lower is better)
Translates to: LLNIPKQFSLLQQQPTKWVYFTV*DGEGLT
Trigger: GGTCAGACCTTCACCATCCAAAACTGTGAAGTACAC...CCACTTTGTTGGTTGTTGTTGCAGAAGACTGAACTGTTTTGGAATATTTAACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CAA 90 bp TTGTTAAATATTCCAAAACAGTTCAGTCTTCTGCAACAACAACCAACAAAGTGGAGGGATAGCACCTGTTaGCGGGTTTTTGCATTGCTA +
Preference number: 5 (lower is better)
Translates to: LLNIPKQFSLLQQQPTKWRDSTC*RVFALL
Trigger: TAGCAATGCAAAAACCCGCAAACAGGTGCTATCCCT...CCACTTTGTTGGTTGTTGTTGCAGAAGACTGAACTGTTTTGGAATATTTAACAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CAA 90 bp GCCATAGAAACCGGACAACCACATTGGAAAACACTTGACTGTTTCTGTAATTGTGGAATGTTAGAAAGATaGCACGTCGATGACAAAGAA +
Preference number: 5 (lower is better)
Translates to: AIETGQPHWKTLDCFCNCGMLER*HVDDKE
Trigger: TTCTTTGTCATCGACGTGCAATCTTTCTAACATTCC...ACAATTACAGAAACAGTCAAGTGTTTTCCAATGTGGTTGTCCGGTTTCTATGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CAA 90 bp TTGTTAAATATTCCAAAACAGTTCAGTCTTCTGCAACAACAACCAACAAAGTGGCTCTTCTGGGAATTCTaGAACTCCTTCAGAGACAAA +
Preference number: 5 (lower is better)
Translates to: LLNIPKQFSLLQQQPTKWLFWEF*NSFRDK
Trigger: TTTGTCTCTGAAGGAGTTCAAGAATTCCCAGAAGAG...CCACTTTGTTGGTTGTTGTTGCAGAAGACTGAACTGTTTTGGAATATTTAACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS-3UTR CAA 90 bp TTGTTAAATATTCCAAAACAGTTCAGTCTTCTGCAACAACAACCAACAAAGTGGTGGGTAGCTACGGGATaGATGAATCCAATTATGAAA +
Preference number: 5 (lower is better)
Translates to: LLNIPKQFSLLQQQPTKWWVATG*MNPIMK
Trigger: TTTCATAATTGGATTCATCAATCCCGTAGCTACCCA...CCACTTTGTTGGTTGTTGTTGCAGAAGACTGAACTGTTTTGGAATATTTAACAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS GCA 72 bp CCGCCCACCCGGCCTTGCCGCCGCCCTTCTCGGCCTTaGCCGAGTCCTGCGGCTTGTGCACGGACTCCGGTT +
Preference number: 6 (lower is better)
Translates to: PPTRPCRRPSRP*PSPAACARTPV
Trigger: AACCGGAGTCCGTGCACAAGCCGCAGGACTCGGGCAAGGCCGAGAAGGGCGGCGGCAAGGCCGGGTGGGCGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS CAA 72 bp AGGACGGGGATCTCGTCCATGGCCGCCCACCCGGCCTaGCCGCCGCCCTTCTCGGCCTTGCCCGAGTCCTGC +
Preference number: 6 (lower is better)
Translates to: RTGISSMAAHPA*PPPFSALPESC
Trigger: GCAGGACTCGGGCAAGGCCGAGAAGGGCGGCGGCAAGGCCGGGTGGGCGGCCATGGACGAGATCCCCGTCCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS CAA 90 bp GAGGGCCTGAGGACGGGGATCTCGTCCATGGCCGCCCACCCGGCCTaGCCGCCGCCCTTCTCGGCCTTGCCCGAGTCCTGCGGCTTGTGC +
Preference number: 6 (lower is better)
Translates to: EGLRTGISSMAAHPA*PPPFSALPESCGLC
Trigger: GCACAAGCCGCAGGACTCGGGCAAGGCCGAGAAGGGCGGCGGCAAGGCCGGGTGGGCGGCCATGGACGAGATCCCCGTCCTCAGGCCCTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS TCA 72 bp GGAACCCGTGGAGGGGGCCGCTGCGGGGTGGTTAGCTaGAGCCTGCTCCCGGCGGCTGTCAGCCCGGTGATC +
Preference number: 6 (lower is better)
Translates to: GTRGGGRCGVVS*SLLPAAVSPVI
Trigger: GATCACCGGGCTGACAGCCGCCGGGAGCAGGCTTCAGCTAACCACCCCGCAGCGGCCCCCTCCACGGGTTCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS CAA 90 bp CGCCGCCGGCCAGTCTTCAACTGGGCCTGGCCCACCTCCTTGAGCTaGCTGCGGAAGCCGTTCCTGGGGGCCACGCCGTGGATGAGCCCA +
Preference number: 6 (lower is better)
Translates to: RRRPVFNWAWPTSLS*LRKPFLGATPWMSP
Trigger: TGGGCTCATCCACGGCGTGGCCCCCAGGAACGGCTTCCGCAGCAAGCTCAAGGAGGTGGGCCAGGCCCAGTTGAAGACTGGCCGGCGGCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS TCA 72 bp GCCGGCCAGTCTTCAACTGGGCCTGGCCCACCTCCTTaGGCTTGCTGCGGAAGCCGTTCCTGGGGGCCACGC +
Preference number: 6 (lower is better)
Translates to: AGQSSTGPGPPP*ACCGSRSWGPR
Trigger: GCGTGGCCCCCAGGAACGGCTTCCGCAGCAAGCTCAAGGAGGTGGGCCAGGCCCAGTTGAAGACTGGCCGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS GCA 72 bp CACAGGAGGCGCTGTCCGCCTTGCCATGTGCTTGTCTaGCTGGCGTGCTCTTCCCGGCCGTGGCCCGCTTCG +
Preference number: 6 (lower is better)
Translates to: HRRRCPPCHVLV*LACSSRPWPAS
Trigger: CGAAGCGGGCCACGGCCGGGAAGAGCACGCCAGGCAGACAAGCACATGGCAAGGCGGACAGCGCCTCCTGTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS CAA 72 bp CGCCGGCCAGTCTTCAACTGGGCCTGGCCCACCTCCTaGAGCTTGCTGCGGAAGCCGTTCCTGGGGGCCACG +
Preference number: 6 (lower is better)
Translates to: RRPVFNWAWPTS*SLLRKPFLGAT
Trigger: CGTGGCCCCCAGGAACGGCTTCCGCAGCAAGCTCAAGGAGGTGGGCCAGGCCCAGTTGAAGACTGGCCGGCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS CAA 90 bp AAGAGTCGCCGCCGGCCAGTCTTCAACTGGGCCTGGCCCACCTCCTaGAGCTTGCTGCGGAAGCCGTTCCTGGGGGCCACGCCGTGGATG +
Preference number: 6 (lower is better)
Translates to: KSRRRPVFNWAWPTS*SLLRKPFLGATPWM
Trigger: CATCCACGGCGTGGCCCCCAGGAACGGCTTCCGCAGCAAGCTCAAGGAGGTGGGCCAGGCCCAGTTGAAGACTGGCCGGCGGCGACTCTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS TCA 72 bp TGCTGCGGAAGCCGTTCCTGGGGGCCACGCCGTGGATaGGCCCATTCTTGGGCTCGAAGCGGGGCAGAGGGT +
Preference number: 6 (lower is better)
Translates to: CCGSRSWGPRRG*AHSWARSGAEG
Trigger: ACCCTCTGCCCCGCTTCGAGCCCAAGAATGGGCTCATCCACGGCGTGGCCCCCAGGAACGGCTTCCGCAGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS GCA 72 bp GCCTTGCCGCCGCCCTTCTCGGCCTTGCCCGAGTCCTaGGGCTTGTGCACGGACTCCGGTTGCGAGGTAGAA +
Preference number: 6 (lower is better)
Translates to: ALPPPFSALPES*GLCTDSGCEVE
Trigger: TTCTACCTCGCAACCGGAGTCCGTGCACAAGCCGCAGGACTCGGGCAAGGCCGAGAAGGGCGGCGGCAAGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS GCA 72 bp TCTTCCCGTCCGCCACCGTGCTGCTGCCATCGTGGCTaGCATAGCGTGCGGAGGAGTGGAGGCCAGCCTCGA +
Preference number: 6 (lower is better)
Translates to: SSRPPPCCCHRG*HSVRRSGGQPR
Trigger: TCGAGGCTGGCCTCCACTCCTCCGCACGCTATGGCAGCCACGATGGCAGCAGCACGGTGGCGGACGGGAAGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS CCA 72 bp CATGTGCTTGTCTGCCTGGCGTGCTCTTCCCGGCCGTaGCCCGCTTCGGCCGATTCCTCTCCAGACTGCGCT +
Preference number: 6 (lower is better)
Translates to: HVLVCLACSSRP*PASADSSPDCA
Trigger: AGCGCAGTCTGGAGAGGAATCGGCCGAAGCGGGCCACGGCCGGGAAGAGCACGCCAGGCAGACAAGCACATG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS CCA 72 bp AGCTTGCTGCGGAAGCCGTTCCTGGGGGCCACGCCGTaGATGAGCCCATTCTTGGGCTCGAAGCGGGGCAGA +
Preference number: 6 (lower is better)
Translates to: SLLRKPFLGATP*MSPFLGSKRGR
Trigger: TCTGCCCCGCTTCGAGCCCAAGAATGGGCTCATCCACGGCGTGGCCCCCAGGAACGGCTTCCGCAGCAAGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS CAA 90 bp GGTAGAACGATTTTCACAGGAGGCGCTGTCCGCCTTGCCATGTGCTaGTCTGCCTGGCGTGCTCTTCCCGGCCGTGGCCCGCTTCGGCCG +
Preference number: 6 (lower is better)
Translates to: GRTIFTGGAVRLAMC*SAWRALPGRGPLRP
Trigger: CGGCCGAAGCGGGCCACGGCCGGGAAGAGCACGCCAGGCAGACAAGCACATGGCAAGGCGGACAGCGCCTCCTGTGAAAATCGTTCTACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS CAA 90 bp CCGGCCTTGCCGCCGCCCTTCTCGGCCTTGCCCGAGTCCTGCGGCTaGTGCACGGACTCCGGTTGCGAGGTAGAACGATTTTCACAGGAG +
Preference number: 6 (lower is better)
Translates to: PALPPPFSALPESCG*CTDSGCEVERFSQE
Trigger: CTCCTGTGAAAATCGTTCTACCTCGCAACCGGAGTCCGTGCACAAGCCGCAGGACTCGGGCAAGGCCGAGAAGGGCGGCGGCAAGGCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS CAA 90 bp CTGCGGAAGCCGTTCCTGGGGGCCACGCCGTGGATGAGCCCATTCTaGGGCTCGAAGCGGGGCAGAGGGTGGAACTTGTGGTGGTCGTTC +
Preference number: 6 (lower is better)
Translates to: LRKPFLGATPWMSPF*GSKRGRGWNLWWSF
Trigger: GAACGACCACCACAAGTTCCACCCTCTGCCCCGCTTCGAGCCCAAGAATGGGCTCATCCACGGCGTGGCCCCCAGGAACGGCTTCCGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS CAA 72 bp ATTTTCACAGGAGGCGCTGTCCGCCTTGCCATGTGCTaGTCTGCCTGGCGTGCTCTTCCCGGCCGTGGCCCG +
Preference number: 6 (lower is better)
Translates to: IFTGGAVRLAMC*SAWRALPGRGP
Trigger: CGGGCCACGGCCGGGAAGAGCACGCCAGGCAGACAAGCACATGGCAAGGCGGACAGCGCCTCCTGTGAAAAT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS CAA 72 bp CCGCCGCCCTTCTCGGCCTTGCCCGAGTCCTGCGGCTaGTGCACGGACTCCGGTTGCGAGGTAGAACGATTT +
Preference number: 6 (lower is better)
Translates to: PPPFSALPESCG*CTDSGCEVERF
Trigger: AAATCGTTCTACCTCGCAACCGGAGTCCGTGCACAAGCCGCAGGACTCGGGCAAGGCCGAGAAGGGCGGCGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS TCA 72 bp TTAGCTGAAGCCTGCTCCCGGCGGCTGTCAGCCCGGTaGTCGCTGTGCTTCTCCTTTGCGGGAGTGGCCTCT +
Preference number: 6 (lower is better)
Translates to: LAEACSRRLSAR*SLCFSFAGVAS
Trigger: AGAGGCCACTCCCGCAAAGGAGAAGCACAGCGATCACCGGGCTGACAGCCGCCGGGAGCAGGCTTCAGCTAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS GCA 72 bp ACGATTTTCACAGGAGGCGCTGTCCGCCTTGCCATGTaGTTGTCTGCCTGGCGTGCTCTTCCCGGCCGTGGC +
Preference number: 6 (lower is better)
Translates to: TIFTGGAVRLAM*LSAWRALPGRG
Trigger: GCCACGGCCGGGAAGAGCACGCCAGGCAGACAAGCACATGGCAAGGCGGACAGCGCCTCCTGTGAAAATCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS GCA 72 bp GCCACTTTCGAGGCTTTTTCTTCCCGTCCGCCACCGTaGTGCTGCCATCGTGGCTGCCATAGCGTGCGGAGG +
Preference number: 6 (lower is better)
Translates to: ATFEAFSSRPPP*CCHRGCHSVRR
Trigger: CCTCCGCACGCTATGGCAGCCACGATGGCAGCAGCACGGTGGCGGACGGGAAGAAAAAGCCTCGAAAGTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS CCA 72 bp TTCTTGGGCTCGAAGCGGGGCAGAGGGTGGAACTTGTaGTGGTCGTTCTCTGTGTGGCCTTCCAGCGGCCCC +
Preference number: 6 (lower is better)
Translates to: FLGSKRGRGWNL*WSFSVWPSSGP
Trigger: GGGGCCGCTGGAAGGCCACACAGAGAACGACCACCACAAGTTCCACCCTCTGCCCCGCTTCGAGCCCAAGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS CAA 90 bp TCCGGTTGCGAGGTAGAACGATTTTCACAGGAGGCGCTGTCCGCCTaGCCATGTGCTTGTCTGCCTGGCGTGCTCTTCCCGGCCGTGGCC +
Preference number: 6 (lower is better)
Translates to: SGCEVERFSQEALSA*PCACLPGVLFPAVA
Trigger: GGCCACGGCCGGGAAGAGCACGCCAGGCAGACAAGCACATGGCAAGGCGGACAGCGCCTCCTGTGAAAATCGTTCTACCTCGCAACCGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS CAA 90 bp CTTCTCGGCCTTGCCCGAGTCCTGCGGCTTGTGCACGGACTCCGGTaGCGAGGTAGAACGATTTTCACAGGAGGCGCTGTCCGCCTTGCC +
Preference number: 6 (lower is better)
Translates to: LLGLARVLRLVHGLR*RGRTIFTGGAVRLA
Trigger: GGCAAGGCGGACAGCGCCTCCTGTGAAAATCGTTCTACCTCGCAACCGGAGTCCGTGCACAAGCCGCAGGACTCGGGCAAGGCCGAGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS CAA 90 bp TGGATGAGCCCATTCTTGGGCTCGAAGCGGGGCAGAGGGTGGAACTaGTGGTGGTCGTTCTCTGTGTGGCCTTCCAGCGGCCCCTTGCGC +
Preference number: 6 (lower is better)
Translates to: WMSPFLGSKRGRGWN*WWSFSVWPSSGPLR
Trigger: GCGCAAGGGGCCGCTGGAAGGCCACACAGAGAACGACCACCACAAGTTCCACCCTCTGCCCCGCTTCGAGCCCAAGAATGGGCTCATCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS GCA 72 bp CCGCCCTTCTCGGCCTTGCCCGAGTCCTGCGGCTTGTaGACGGACTCCGGTTGCGAGGTAGAACGATTTTCA +
Preference number: 6 (lower is better)
Translates to: PPFSALPESCGL*TDSGCEVERFS
Trigger: TGAAAATCGTTCTACCTCGCAACCGGAGTCCGTGCACAAGCCGCAGGACTCGGGCAAGGCCGAGAAGGGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS GCA 72 bp TTCGAGGCTTTTTCTTCCCGTCCGCCACCGTGCTGCTaGCATCGTGGCTGCCATAGCGTGCGGAGGAGTGGA +
Preference number: 6 (lower is better)
Translates to: FEAFSSRPPPCC*HRGCHSVRRSG
Trigger: TCCACTCCTCCGCACGCTATGGCAGCCACGATGGCAGCAGCACGGTGGCGGACGGGAAGAAAAAGCCTCGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS CAA 72 bp CCATTCTTGGGCTCGAAGCGGGGCAGAGGGTGGAACTaGTGGTGGTCGTTCTCTGTGTGGCCTTCCAGCGGC +
Preference number: 6 (lower is better)
Translates to: PFLGSKRGRGWN*WWSFSVWPSSG
Trigger: GCCGCTGGAAGGCCACACAGAGAACGACCACCACAAGTTCCACCCTCTGCCCCGCTTCGAGCCCAAGAATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS TCA 72 bp CCCCCTATGAGCGGGAGCTCGTCCATGGTGATGCCCTaGGATTTGAGGTGCTTCTTGATGCAGGCCAGCCGC +
Preference number: 6 (lower is better)
Translates to: PPMSGSSSMVMP*DLRCFLMQASR
Trigger: GCGGCTGGCCTGCATCAAGAAGCACCTCAAATCTCAGGGCATCACCATGGACGAGCTCCCGCTCATAGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS GCA 72 bp TTGCCCGAGTCCTGCGGCTTGTGCACGGACTCCGGTTaGGAGGTAGAACGATTTTCACAGGAGGCGCTGTCC +
Preference number: 6 (lower is better)
Translates to: LPESCGLCTDSG*EVERFSQEALS
Trigger: GGACAGCGCCTCCTGTGAAAATCGTTCTACCTCGCAACCGGAGTCCGTGCACAAGCCGCAGGACTCGGGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS GCA 72 bp ACCTCCGGGGAGATCATGACGTTGCTTTCCAGCATCTaGAGCCCTGGGGTGCCATTGGCTTGCAGCAGGGTG +
Preference number: 6 (lower is better)
Translates to: TSGEIMTLLSSI*SPGVPLACSRV
Trigger: CACCCTGCTGCAAGCCAATGGCACCCCAGGGCTGCAGATGCTGGAAAGCAACGTCATGATCTCCCCGGAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS GCA 72 bp ACTTTCGAGGCTTTTTCTTCCCGTCCGCCACCGTGCTaGTGCCATCGTGGCTGCCATAGCGTGCGGAGGAGT +
Preference number: 6 (lower is better)
Translates to: TFEAFSSRPPPC*CHRGCHSVRRS
Trigger: ACTCCTCCGCACGCTATGGCAGCCACGATGGCAGCAGCACGGTGGCGGACGGGAAGAAAAAGCCTCGAAAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS CAA 72 bp CTTGCCCGAGTCCTGCGGCTTGTGCACGGACTCCGGTaGCGAGGTAGAACGATTTTCACAGGAGGCGCTGTC +
Preference number: 6 (lower is better)
Translates to: LARVLRLVHGLR*RGRTIFTGGAV
Trigger: GACAGCGCCTCCTGTGAAAATCGTTCTACCTCGCAACCGGAGTCCGTGCACAAGCCGCAGGACTCGGGCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS TCA 72 bp AGCCAGGGAATAGTCACTCCAGGCACAGCACCGAGGTaGCGCAGGATGGACCCTGTGTTATTGGGGAGGACG +
Preference number: 6 (lower is better)
Translates to: SQGIVTPGTAPR*RRMDPVLLGRT
Trigger: CGTCCTCCCCAATAACACAGGGTCCATCCTGCGTCACCTCGGTGCTGTGCCTGGAGTGACTATTCCCTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341776.7
ENST00000397311.4
ENST00000474854.1
CDS GCA 72 bp CTGGGAATCCACTGCCGTGAGTGTTGGTGTCCACCTTaGCGCAGTGCACTGCCACGTGGCAGTCCTTCTCTT +
Preference number: 6 (lower is better)
Translates to: LGIHCRECWCPP*RSALPRGSPSL
Trigger: AAGAGAAGGACTGCCACGTGGCAGTGCACTGCGGCAAGGTGGACACCAACACTCACGGCAGTGGATTCCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341776.7
ENST00000397311.4
ENST00000474854.1
CDS GCA 72 bp GATCCCGGGAAGCAGACGACAAACTGGCCACTCTGCTaGACGGTCCTGTGCACCTTGATCCCCTCTTTGCAC +
Preference number: 6 (lower is better)
Translates to: DPGKQTTNWPLC*TVLCTLIPSLH
Trigger: GTGCAAAGAGGGGATCAAGGTGCACAGGACCGTGCAGCAGAGTGGCCAGTTTGTCGTCTGCTTCCCGGGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS CCA 72 bp ATGAGCCCATTCTTGGGCTCGAAGCGGGGCAGAGGGTaGAACTTGTGGTGGTCGTTCTCTGTGTGGCCTTCC +
Preference number: 6 (lower is better)
Translates to: MSPFLGSKRGRG*NLWWSFSVWPS
Trigger: GGAAGGCCACACAGAGAACGACCACCACAAGTTCCACCCTCTGCCCCGCTTCGAGCCCAAGAATGGGCTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS CCA 72 bp GGAGATCATGACGTTGCTTTCCAGCATCTGCAGCCCTaGGGTGCCATTGGCTTGCAGCAGGGTGTGGACCAC +
Preference number: 6 (lower is better)
Translates to: GDHDVAFQHLQP*GAIGLQQGVDH
Trigger: GTGGTCCACACCCTGCTGCAAGCCAATGGCACCCCAGGGCTGCAGATGCTGGAAAGCAACGTCATGATCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS CAA 90 bp CCTGCTCCCGGCGGCTGTCAGCCCGGTGATCGCTGTGCTTCTCCTTaGCGGGAGTGGCCTCTTTGCTTTTGTGTTTTTGAACAGGTTCCT +
Preference number: 6 (lower is better)
Translates to: PAPGGCQPGDRCASP*REWPLCFCVFEQVP
Trigger: AGGAACCTGTTCAAAAACACAAAAGCAAAGAGGCCACTCCCGCAAAGGAGAAGCACAGCGATCACCGGGCTGACAGCCGCCGGGAGCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS CAA 90 bp CATGACGTTGCTTTCCAGCATCTGCAGCCCTGGGGTGCCATTGGCTaGCAGCAGGGTGTGGACCACATCTTCCAGCTTGTTCTCCTCCTC +
Preference number: 6 (lower is better)
Translates to: HDVAFQHLQPWGAIG*QQGVDHIFQLVLLL
Trigger: GAGGAGGAGAACAAGCTGGAAGATGTGGTCCACACCCTGCTGCAAGCCAATGGCACCCCAGGGCTGCAGATGCTGGAAAGCAACGTCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS CAA 90 bp AAGCAGACGACAAACTGGCCACTCTGCTGCACGGTCCTGTGCACCTaGATCCCCTCTTTGCACAGCACCTCCGGGGAGATCATGACGTTG +
Preference number: 6 (lower is better)
Translates to: KQTTNWPLCCTVLCT*IPSLHSTSGEIMTL
Trigger: CAACGTCATGATCTCCCCGGAGGTGCTGTGCAAAGAGGGGATCAAGGTGCACAGGACCGTGCAGCAGAGTGGCCAGTTTGTCGTCTGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS GCA 72 bp CTTTCCAGCATCTGCAGCCCTGGGGTGCCATTGGCTTaGAGCAGGGTGTGGACCACATCTTCCAGCTTGTTC +
Preference number: 6 (lower is better)
Translates to: LSSICSPGVPLA*SRVWTTSSSLF
Trigger: GAACAAGCTGGAAGATGTGGTCCACACCCTGCTGCAAGCCAATGGCACCCCAGGGCTGCAGATGCTGGAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS GCA 72 bp AAGGATCCCGGGAAGCAGACGACAAACTGGCCACTCTaGTGCACGGTCCTGTGCACCTTGATCCCCTCTTTG +
Preference number: 6 (lower is better)
Translates to: KDPGKQTTNWPL*CTVLCTLIPSL
Trigger: CAAAGAGGGGATCAAGGTGCACAGGACCGTGCAGCAGAGTGGCCAGTTTGTCGTCTGCTTCCCGGGATCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS CCA 72 bp GTGTTGGTGTCCACCTTGCCGCAGTGCACTGCCACGTaGCAGTCCTTCTCTTCCACTAGCCTCCAGTACTCT +
Preference number: 6 (lower is better)
Translates to: VLVSTLPQCTAT*QSFSSTSLQYS
Trigger: AGAGTACTGGAGGCTAGTGGAAGAGAAGGACTGCCACGTGGCAGTGCACTGCGGCAAGGTGGACACCAACAC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341776.7
ENST00000397311.4
ENST00000474854.1
CDS CCA 72 bp CTGATTTTCCTACTGGGAATCCACTGCCGTGAGTGTTaGTGTCCACCTTGCCGCAGTGCACTGCCACGTGGC +
Preference number: 6 (lower is better)
Translates to: LIFLLGIHCREC*CPPCRSALPRG
Trigger: GCCACGTGGCAGTGCACTGCGGCAAGGTGGACACCAACACTCACGGCAGTGGATTCCCAGTAGGAAAATCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341776.7
ENST00000397311.4
ENST00000474854.1
CDS CAA 72 bp GCTTTCCAGCATCTGCAGCCCTGGGGTGCCATTGGCTaGCAGCAGGGTGTGGACCACATCTTCCAGCTTGTT +
Preference number: 6 (lower is better)
Translates to: AFQHLQPWGAIG*QQGVDHIFQLV
Trigger: AACAAGCTGGAAGATGTGGTCCACACCCTGCTGCAAGCCAATGGCACCCCAGGGCTGCAGATGCTGGAAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS GCA 72 bp GGGACTATTCGGCTGAGACTGAGCAAACTTCCTTTGTaGTTGCAGCCTGGGCCTTTTCCTCGACGGCCCTTC +
Preference number: 6 (lower is better)
Translates to: GTIRLRLSKLPL*LQPGPFPRRPF
Trigger: GAAGGGCCGTCGAGGAAAAGGCCCAGGCTGCAAGCACAAAGGAAGTTTGCTCAGTCTCAGCCGAATAGTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS CCA 72 bp TTGGACACAAAGGATCCCGGGAAGCAGACGACAAACTaGCCACTCTGCTGCACGGTCCTGTGCACCTTGATC +
Preference number: 6 (lower is better)
Translates to: LDTKDPGKQTTN*PLCCTVLCTLI
Trigger: GATCAAGGTGCACAGGACCGTGCAGCAGAGTGGCCAGTTTGTCGTCTGCTTCCCGGGATCCTTTGTGTCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS CAA 72 bp TTAGTGCATGACTTTGGGTTCAACCTGCCACTGACCTaGAGGCCATTGACGGCGGGCCCAGTGGACTTGGAC +
Preference number: 6 (lower is better)
Translates to: LVHDFGFNLPLT*RPLTAGPVDLD
Trigger: GTCCAAGTCCACTGGGCCCGCCGTCAATGGCCTCAAGGTCAGTGGCAGGTTGAACCCAAAGTCATGCACTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS TCA 72 bp AAGGGTTCTGATTTTCCTACTGGGAATCCACTGCCGTaGGTGTTGGTGTCCACCTTGCCGCAGTGCACTGCC +
Preference number: 6 (lower is better)
Translates to: KGSDFPTGNPLP*VLVSTLPQCTA
Trigger: GGCAGTGCACTGCGGCAAGGTGGACACCAACACTCACGGCAGTGGATTCCCAGTAGGAAAATCAGAACCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341776.7
ENST00000397311.4
ENST00000474854.1
CDS TCA 72 bp GTTTGGTTTCTTTCCCTTTCCACGACCAAGCGCTGCTaGGAGCCCACCGACGTCAGCAGCTGGAAGTTCACA +
Preference number: 6 (lower is better)
Translates to: VWFLSLSTTKRC*EPTDVSSWKFT
Trigger: TGTGAACTTCCAGCTGCTGACGTCGGTGGGCTCTCAGCAGCGCTTGGTCGTGGAAAGGGAAAGAAACCAAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474854.1
CDS CAA 72 bp GGCGGCTGTCAGCCCGGTGATCGCTGTGCTTCTCCTTaGCGGGAGTGGCCTCTTTGCTTTTGTGTTTTTGAA +
Preference number: 6 (lower is better)
Translates to: GGCQPGDRCASP*REWPLCFCVFE
Trigger: TTCAAAAACACAAAAGCAAAGAGGCCACTCCCGCAAAGGAGAAGCACAGCGATCACCGGGCTGACAGCCGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS CAA 90 bp GGGGTGCCATTGGCTTGCAGCAGGGTGTGGACCACATCTTCCAGCTaGTTCTCCTCCTCAGCAGGAATGCAATACCAAATGCAGTCAGCA +
Preference number: 6 (lower is better)
Translates to: GVPLACSRVWTTSSS*FSSSAGMQYQMQSA
Trigger: TGCTGACTGCATTTGGTATTGCATTCCTGCTGAGGAGGAGAACAAGCTGGAAGATGTGGTCCACACCCTGCTGCAAGCCAATGGCACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS TCA 72 bp GACGCAGGATGGACCCTGTGTTATTGGGGAGGACGGTaGGGTTCCATCCATGCCTCGAAAAGGGTTCTGATT +
Preference number: 6 (lower is better)
Translates to: DAGWTLCYWGGR*GSIHASKRVLI
Trigger: AATCAGAACCCTTTTCGAGGCATGGATGGAACCTCACCGTCCTCCCCAATAACACAGGGTCCATCCTGCGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341776.7
ENST00000397311.4
ENST00000474854.1
CDS GCA 72 bp CTTCCTCCTCATCCTGAGAGCTTCCAAAATACACCATaGTGTTGGGCAGCGCAGGAGAACCTCGAAGGCAGA +
Preference number: 6 (lower is better)
Translates to: LPPHPESFQNTP*CWAAQENLEGR
Trigger: TCTGCCTTCGAGGTTCTCCTGCGCTGCCCAACAGCATGGTGTATTTTGGAAGCTCTCAGGATGAGGAGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS CCA 72 bp CCTCATCCTGAGAGCTTCCAAAATACACCATGCTGTTaGGCAGCGCAGGAGAACCTCGAAGGCAGAGAAAGG +
Preference number: 6 (lower is better)
Translates to: PHPESFQNTPCC*AAQENLEGRER
Trigger: CCTTTCTCTGCCTTCGAGGTTCTCCTGCGCTGCCCAACAGCATGGTGTATTTTGGAAGCTCTCAGGATGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS CCA 72 bp CACGTCCACTGTCGCTCTCTTGCGGGGACCTCTTTTTaGTGTGGGTTTACTGAGACAGTTCTCAATGCTGCC +
Preference number: 6 (lower is better)
Translates to: HVHCRSLAGTSF*CGFTETVLNAA
Trigger: GGCAGCATTGAGAACTGTCTCAGTAAACCCACACCAAAAAGAGGTCCCCGCAAGAGAGCGACAGTGGACGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS CAA 72 bp ACTATTCGGCTGAGACTGAGCAAACTTCCTTTGTGCTaGCAGCCTGGGCCTTTTCCTCGACGGCCCTTCTTC +
Preference number: 6 (lower is better)
Translates to: TIRLRLSKLPLC*QPGPFPRRPFF
Trigger: GAAGAAGGGCCGTCGAGGAAAAGGCCCAGGCTGCAAGCACAAAGGAAGTTTGCTCAGTCTCAGCCGAATAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS CAA 72 bp GCCCCCTTCGTCACCGTGGCAGTGTACTTCACAGTTTaGGATGGTGAAGGTCTGACCTCGCGCATCTTTTTG +
Preference number: 6 (lower is better)
Translates to: APFVTVAVYFTV*DGEGLTSRIFL
Trigger: CAAAAAGATGCGCGAGGTCAGACCTTCACCATCCAAAACTGTGAAGTACACTGCCACGGTGACGAAGGGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS CAA 72 bp TCAGCTGGGCACTCGATTTCGGCTGGGGCAGGCTCCTaGCTGAAACACATGCTCATGATATTCCTCGCTGTT +
Preference number: 6 (lower is better)
Translates to: SAGHSISAGAGS*LKHMLMIFLAV
Trigger: AACAGCGAGGAATATCATGAGCATGTGTTTCAGCAAGGAGCCTGCCCCAGCCGAAATCGAGTGCCCAGCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474854.1
CDS TCA 72 bp CGTCACCGTGGCAGTGTACTTCACAGTTTTGGATGGTaGAGGTCTGACCTCGCGCATCTTTTTGGCACTGGT +
Preference number: 6 (lower is better)
Translates to: RHRGSVLHSFGW*RSDLAHLFGTG
Trigger: ACCAGTGCCAAAAAGATGCGCGAGGTCAGACCTTCACCATCCAAAACTGTGAAGTACACTGCCACGGTGACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS GCA 72 bp TCAAAGCCCATACTTGTCCACTGGGTGGTAGCAAAGTaGACGGTTTCAGACACGCTGTACCCACAGCACACT +
Preference number: 6 (lower is better)
Translates to: SKPILVHWVVAK*TVSDTLYPQHT
Trigger: AGTGTGCTGTGGGTACAGCGTGTCTGAAACCGTGCACTTTGCTACCACCCAGTGGACAAGTATGGGCTTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS CAA 90 bp TATGTGACAGCCCCCTTCGTCACCGTGGCAGTGTACTTCACAGTTTaGGATGGTGAAGGTCTGACCTCGCGCATCTTTTTGGCACTGGTT +
Preference number: 6 (lower is better)
Translates to: YVTAPFVTVAVYFTV*DGEGLTSRIFLALV
Trigger: AACCAGTGCCAAAAAGATGCGCGAGGTCAGACCTTCACCATCCAAAACTGTGAAGTACACTGCCACGGTGACGAAGGGGGCTGTCACATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS CAA 90 bp CTGGGGGTCGACTGGCATGAAGATGAAGCATTGTTGGTGGCTGTTTaGACGTCTTCTGTCTCATCATCTTCCTCCTCGACTTCCTCCTCA +
Preference number: 6 (lower is better)
Translates to: LGVDWHEDEALLVAV*TSSVSSSSSSTSSS
Trigger: TGAGGAGGAAGTCGAGGAGGAAGATGATGAGACAGAAGACGTCAAAACAGCCACCAACAATGCTTCATCTTCATGCCAGTCGACCCCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS TCA 72 bp GAGATTGTGTGGTTGACAGCGGAACTGGGCTTGTGGTaGTTGGGTTTGGTGTCCTTGACCAGTTCTCTCTTG +
Preference number: 6 (lower is better)
Translates to: EIVWLTAELGLW*LGLVSLTSSLL
Trigger: CAAGAGAGAACTGGTCAAGGACACCAAACCCAATCACCACAAGCCCAGTTCCGCTGTCAACCACACAATCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS GCA 72 bp GGGGTAGCAATGGCTCCACTATCTTTACTGGAGTTGTaGTGGGACTATTCGGCTGAGACTGAGCAAACTTCC +
Preference number: 6 (lower is better)
Translates to: GVAMAPLSLLEL*WDYSAETEQTS
Trigger: GGAAGTTTGCTCAGTCTCAGCCGAATAGTCCCAGCACAACTCCAGTAAAGATAGTGGAGCCATTGCTACCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS CAA 72 bp GAGGGGGTAGCAATGGCTCCACTATCTTTACTGGAGTaGTGCTGGGACTATTCGGCTGAGACTGAGCAAACT +
Preference number: 6 (lower is better)
Translates to: EGVAMAPLSLLE*CWDYSAETEQT
Trigger: AGTTTGCTCAGTCTCAGCCGAATAGTCCCAGCACAACTCCAGTAAAGATAGTGGAGCCATTGCTACCCCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS CAA 72 bp CAGTACTCTTGCTCGATTTCGGCTGGGGCAGGCTCCTaGCTGAAACACATGCTCATGATATTCCTCGCTGTT +
Preference number: 6 (lower is better)
Translates to: QYSCSISAGAGS*LKHMLMIFLAV
Trigger: AACAGCGAGGAATATCATGAGCATGTGTTTCAGCAAGGAGCCTGCCCCAGCCGAAATCGAGCAAGAGTACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS CAA 90 bp GCAGTTCTGGGGATGCGCAGCATGTCTGCTAGTTTGTTCCATTTTTaGAGGTCAGTCACTTGCTGCATGCCGCCCATCTCATTAATCAGC +
Preference number: 6 (lower is better)
Translates to: AVLGMRSMSASLFHF*RSVTCCMPPISLIS
Trigger: GCTGATTAATGAGATGGGCGGCATGCAGCAAGTGACTGACCTCAAAAAATGGAACAAACTAGCAGACATGCTGCGCATCCCCAGAACTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS TCA 72 bp CCTGGGCCTTTTCCTCGACGGCCCTTCTTCAAAATCTaGAGAACTAACATCGTTGCTAGTGGAGGACACTTG +
Preference number: 6 (lower is better)
Translates to: PGPFPRRPFFKI*RTNIVASGGHL
Trigger: CAAGTGTCCTCCACTAGCAACGATGTTAGTTCTTCAGATTTTGAAGAAGGGCCGTCGAGGAAAAGGCCCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS CCA 72 bp GCCCGTTGTGAACATGTTTGTGGGTTTTTCCTTTCCTaGGGGTCGACTGGCATGAAGATGAAGCATTGTTGG +
Preference number: 6 (lower is better)
Translates to: ARCEHVCGFFLS*GSTGMKMKHCW
Trigger: CCAACAATGCTTCATCTTCATGCCAGTCGACCCCCAGGAAAGGAAAAACCCACAAACATGTTCACAACGGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS CAA 72 bp CCTTTCCTGGGGGTCGACTGGCATGAAGATGAAGCATaGTTGGTGGCTGTTTTGACGTCTTCTGTCTCATCA +
Preference number: 6 (lower is better)
Translates to: PFLGVDWHEDEA*LVAVLTSSVSS
Trigger: TGATGAGACAGAAGACGTCAAAACAGCCACCAACAATGCTTCATCTTCATGCCAGTCGACCCCCAGGAAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS CAA 72 bp GTTTTGGATGGTGAAGGTCTGACCTCGCGCATCTTTTaGGCACTGGTTACACCTGCACCCAGAGATGACATT +
Preference number: 6 (lower is better)
Translates to: VLDGEGLTSRIF*ALVTPAPRDDI
Trigger: AATGTCATCTCTGGGTGCAGGTGTAACCAGTGCCAAAAAGATGCGCGAGGTCAGACCTTCACCATCCAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS CAA 90 bp TACTTCACAGTTTTGGATGGTGAAGGTCTGACCTCGCGCATCTTTTaGGCACTGGTTACACCTGCACCCAGAGATGACATTCGAGTGACT +
Preference number: 6 (lower is better)
Translates to: YFTVLDGEGLTSRIF*ALVTPAPRDDIRVT
Trigger: AGTCACTCGAATGTCATCTCTGGGTGCAGGTGTAACCAGTGCCAAAAAGATGCGCGAGGTCAGACCTTCACCATCCAAAACTGTGAAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS TCA 72 bp TCTGTCTTAGGCTTCCTTTTAGAGAGGTCTGATATCTaGGTAGCTGGAGGGGGTAGCAATGGCTCCACTATC +
Preference number: 6 (lower is better)
Translates to: SVLGFLLERSDI*VAGGGSNGSTI
Trigger: GATAGTGGAGCCATTGCTACCCCCTCCAGCTACTCAGATATCAGACCTCTCTAAAAGGAAGCCTAAGACAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS TCA 72 bp CATTGCTACTTTCAGTTTTCCCTGAGATTGTGTGGTTaGCAGCGGAACTGGGCTTGTGGTGATTGGGTTTGG +
Preference number: 6 (lower is better)
Translates to: HCYFQFSLRLCG*QRNWACGDWVW
Trigger: CCAAACCCAATCACCACAAGCCCAGTTCCGCTGTCAACCACACAATCTCAGGGAAAACTGAAAGTAGCAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS TCA 72 bp AGACAAATAAAGGACTTTACGTACCACCCGTTCTTCTaGCCACGGAATCCCATCACTGTCATCCTGGTGGGA +
Preference number: 6 (lower is better)
Translates to: RQIKDFTYHPFF*PRNPITVILVG
Trigger: TCCCACCAGGATGACAGTGATGGGATTCCGTGGTCAGAAGAACGGGTGGTACGTAAAGTCCTTTATTTGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397311.4
CDS TCA 72 bp CATCTTTTTGGCACTGGTTACACCTGCACCCAGAGATaGCATTCGAGTGACTCCGTTTACCTTAGAAACCTG +
Preference number: 6 (lower is better)
Translates to: HLFGTGYTCTQR*HSSDSVYLRNL
Trigger: CAGGTTTCTAAGGTAAACGGAGTCACTCGAATGTCATCTCTGGGTGCAGGTGTAACCAGTGCCAAAAAGATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS TCA 72 bp TTTGCGGGTTTTTGCATTGCTACTTTCAGTTTTCCCTaGGATTGTGTGGTTGACAGCGGAACTGGGCTTGTG +
Preference number: 6 (lower is better)
Translates to: FAGFCIATFSFP*DCVVDSGTGLV
Trigger: CACAAGCCCAGTTCCGCTGTCAACCACACAATCTCAGGGAAAACTGAAAGTAGCAATGCAAAAACCCGCAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS CCA 72 bp TCTGACTGTTCTGATGCTGGTCCTAATCCCTTAGACTaGTCATTACCAAGGAGCCCATTCACAGTTTTCAGG +
Preference number: 6 (lower is better)
Translates to: SDCSDAGPNPLD*SLPRSPFTVFR
Trigger: CCTGAAAACTGTGAATGGGCTCCTTGGTAATGACCAGTCTAAGGGATTAGGACCAGCATCAGAACAGTCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS CAA 72 bp GACGGCCCTTCTTCAAAATCTGAAGAACTAACATCGTaGCTAGTGGAGGACACTTGGGATGCATCGTCCTTT +
Preference number: 6 (lower is better)
Translates to: DGPSSKSEELTS*LVEDTWDASSF
Trigger: AAAGGACGATGCATCCCAAGTGTCCTCCACTAGCAACGATGTTAGTTCTTCAGATTTTGAAGAAGGGCCGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS CAA 72 bp GACTGGCATGAAGATGAAGCATTGTTGGTGGCTGTTTaGACGTCTTCTGTCTCATCATCTTCCTCCTCGACT +
Preference number: 6 (lower is better)
Translates to: DWHEDEALLVAV*TSSVSSSSSST
Trigger: AGTCGAGGAGGAAGATGATGAGACAGAAGACGTCAAAACAGCCACCAACAATGCTTCATCTTCATGCCAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS TCA 72 bp ACTGGCATGAAGATGAAGCATTGTTGGTGGCTGTTTTaGCGTCTTCTGTCTCATCATCTTCCTCCTCGACTT +
Preference number: 6 (lower is better)
Translates to: TGMKMKHCWWLF*RLLSHHLPPRL
Trigger: AAGTCGAGGAGGAAGATGATGAGACAGAAGACGTCAAAACAGCCACCAACAATGCTTCATCTTCATGCCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS CCA 72 bp TCTGAAGAACTAACATCGTTGCTAGTGGAGGACACTTaGGATGCATCGTCCTTTTCATTCTCTGACTGTTCT +
Preference number: 6 (lower is better)
Translates to: SEELTSLLVEDT*DASSFSFSDCS
Trigger: AGAACAGTCAGAGAATGAAAAGGACGATGCATCCCAAGTGTCCTCCACTAGCAACGATGTTAGTTCTTCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341776.7
ENST00000397311.4
CDS TCA 72 bp AGACAAATAAAGGACTTTACGTACCACCCGTTCTTCTaGCCACGGAATCCCATCACTGTCATCGTATTTCTT +
Preference number: 6 (lower is better)
Translates to: RQIKDFTYHPFF*PRNPITVIVFL
Trigger: AAGAAATACGATGACAGTGATGGGATTCCGTGGTCAGAAGAACGGGTGGTACGTAAAGTCCTTTATTTGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341776.7
CDS TCA 72 bp AAACTACATCAGCGAAACGTGAAGGTCCTTAGTGTCTaGTCCGTAGTTACATCTTGGAAAAGAAAAGGGAAA +
Preference number: 6 (lower is better)
Translates to: KLHQRNVKVLSV*SVVTSWKRKGK
Trigger: TTTCCCTTTTCTTTTCCAAGATGTAACTACGGATCAGACACTAAGGACCTTCACGTTTCGCTGATGTAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341776.7