RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for JAM2 (Homo sapiens)

Ensembl gene IDs: ENSG00000154721

Ensembl transcript IDs: ENST00000312957.9, ENST00000400532.5, ENST00000460679.5, ENST00000477351.1, ENST00000480456.6, ENST00000492962.1

Found 365 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TGTGGTTCATCGGTTGAGAAACCCACATTAGATCCACTTTTCGTTTaGGCCATTGCTCATGTGCCCACTGTGTTTCAAGAGGGGTACCAG +
Preference number: 1 (lower is better)
Translates to: CGSSVEKPTLDPLFV*AIAHVPTVFQEGYQ
Trigger: CTGGTACCCCTCTTGAAACACAGTGGGCACATGAGCAATGGCTCAAACGAAAAGTGGATCTAATGTGGGTTTCTCAACCGATGAACCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
3UTR TCA 90 bp CTTGGCCCGGAATGTCACTGCACAATTTTTAGAGACAGAAAGATGTaGAGTCACCACTCCTGCAGGGAAAGGTATCTGCAAACTTGTGTA +
Preference number: 1 (lower is better)
Translates to: LGPECHCTIFRDRKM*SHHSCRERYLQTCV
Trigger: TACACAAGTTTGCAGATACCTTTCCCTGCAGGAGTGGTGACTTCACATCTTTCTGTCTCTAAAAATTGTGCAGTGACATTCCGGGCCAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
3UTR TCA 90 bp CTCCTGCAGGGAAAGGTATCTGCAAACTTGTGTAGGCTCCAGTGGTaGGTTCTGATGTCAAAGTCACTGATCCTCTTCAAAGAAATCTTA +
Preference number: 1 (lower is better)
Translates to: LLQGKVSANLCRLQW*VLMSKSLILFKEIL
Trigger: TAAGATTTCTTTGAAGAGGATCAGTGACTTTGACATCAGAACTCACCACTGGAGCCTACACAAGTTTGCAGATACCTTTCCCTGCAGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
3UTR TCA 90 bp TCATTTAAACTGAAGAAGTTGATCTTGTGTGATGACAGGTATGTCTaGAGAGGCGTCTTTCAGAGTCATCTATCCTCTTGGCATGCCAAT +
Preference number: 1 (lower is better)
Translates to: SFKLKKLILCDDRYV*RGVFQSHLSSWHAN
Trigger: ATTGGCATGCCAAGAGGATAGATGACTCTGAAAGACGCCTCTTCAGACATACCTGTCATCACACAAGATCAACTTCTTCAGTTTAAATGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
3UTR TCA 90 bp GAAAGAAGATTAACCATCATGTTCATAGTTGTCAAAGGTAGCAAGTaGCCTTTTCATCCACATTTGCCCAGAAGAATAGGACATGCCCTA +
Preference number: 1 (lower is better)
Translates to: ERRLTIMFIVVKGSK*PFHPHLPRRIGHAL
Trigger: TAGGGCATGTCCTATTCTTCTGGGCAAATGTGGATGAAAAGGTCACTTGCTACCTTTGACAACTATGAACATGATGGTTAATCTTCTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
3UTR TCA 90 bp AACAAAGCCACCTGTGGAAAAAGGAAGTTCTTTGCAAAGTTGTATTaGAAAGCAATCAATTGGTCCAGACTTAGGTCAAACCTCCAACTA +
Preference number: 1 (lower is better)
Translates to: NKATCGKRKFFAKLY*KAINWSRLRSNLQL
Trigger: TAGTTGGAGGTTTGACCTAAGTCTGGACCAATTGATTGCTTTTCAATACAACTTTGCAAAGAACTTCCTTTTTCCACAGGTGGCTTTGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
3UTR-3UTR GCA 90 bp GTGAAGTCACCACTCCTGCAGGGAAAGGTATCTGCAAACTTGTGTAGGCTCCAGAGGCAAATCCTGTGGTaGACACCTGTGGGCTCCAGC +
Preference number: 2 (lower is better)
Translates to: VKSPLLQGKVSANLCRLQRQILW*TPVGSS
Trigger: GCTGGAGCCCACAGGTGTGCACCACAGGATTTGCCT...CTGGAGCCTACACAAGTTTGCAGATACCTTTCCCTGCAGGAGTGGTGACTTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
3UTR-3UTR TCA 90 bp GCCCACTGTGTTTCAAGAGGGGTACCAGATGCAGGGAGTCATACTGAGCTTTTTAGAATTGTCAACCCCTaGCTAAGGGACTTGGCCCGG +
Preference number: 2 (lower is better)
Translates to: AHCVSRGVPDAGSHTELFRIVNP*LRDLAR
Trigger: CCGGGCCAAGTCCCTTAGTCAGGGGTTGACAATTCT...AAAAAGCTCAGTATGACTCCCTGCATCTGGTACCCCTCTTGAAACACAGTGGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
3UTR-3UTR GCA 90 bp GTGACCTTTTCATCCACATTTGCCCAGAAGAATAGGACATGCCCTAGCCATATTAGGCAAATCCTGTGGTaGACACCTGTGGGCTCCAGC +
Preference number: 2 (lower is better)
Translates to: VTFSSTFAQKNRTCPSHIRQILW*TPVGSS
Trigger: GCTGGAGCCCACAGGTGTGCACCACAGGATTTGCCT...AATATGGCTAGGGCATGTCCTATTCTTCTGGGCAAATGTGGATGAAAAGGTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
3UTR-3UTR TCA 90 bp GCCCACTGTGTTTCAAGAGGGGTACCAGATGCAGGGAGTCATACTGAGCTTTTTTGTAGGCTCCAGTGGTaGGTTCTGATGTCAAAGTCA +
Preference number: 2 (lower is better)
Translates to: AHCVSRGVPDAGSHTELFCRLQW*VLMSKS
Trigger: TGACTTTGACATCAGAACTCACCACTGGAGCCTACA...AAAAAGCTCAGTATGACTCCCTGCATCTGGTACCCCTCTTGAAACACAGTGGGC
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
3UTR-3UTR GCA 90 bp GCCCACTGTGTTTCAAGAGGGGTACCAGATGCAGGGAGTCATACTGAGCTTTTTCCTCGTGTACCTCTTTaGAAATGTCGGACAAAGCAG +
Preference number: 2 (lower is better)
Translates to: AHCVSRGVPDAGSHTELFPRVPL*KCRTKQ
Trigger: CTGCTTTGTCCGACATTTGCAAAGAGGTACACGAGG...AAAAAGCTCAGTATGACTCCCTGCATCTGGTACCCCTCTTGAAACACAGTGGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
3UTR-3UTR CCA 90 bp GTGAAGTCACCACTCCTGCAGGGAAAGGTATCTGCAAACTTGTGTAGGCTCCAGCTAGAAGTTAGGACGTaGTTAACATTTCCCAAAGCC +
Preference number: 2 (lower is better)
Translates to: VKSPLLQGKVSANLCRLQLEVRT*LTFPKA
Trigger: GGCTTTGGGAAATGTTAACCACGTCCTAACTTCTAG...CTGGAGCCTACACAAGTTTGCAGATACCTTTCCCTGCAGGAGTGGTGACTTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
3UTR-3UTR CCA 90 bp AACACAGACATGACTACTTGCTTGTTTTGTCTGTGGCTGCCTTTGTGCTACAATTGTGGTGCACACCTGTaGGCTCCAGCCATTAGGCAT +
Preference number: 2 (lower is better)
Translates to: NTDMTTCLFCLWLPLCYNCGAHL*APAIRH
Trigger: ATGCCTAATGGCTGGAGCCCACAGGTGTGCACCACA...ATTGTAGCACAAAGGCAGCCACAGACAAAACAAGCAAGTAGTCATGTCTGTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
3UTR-3UTR GCA 90 bp GTGACCTTTTCATCCACATTTGCCCAGAAGAATAGGACATGCCCTAGCCATATTCCTCGTGTACCTCTTTaGAAATGTCGGACAAAGCAG +
Preference number: 2 (lower is better)
Translates to: VTFSSTFAQKNRTCPSHIPRVPL*KCRTKQ
Trigger: CTGCTTTGTCCGACATTTGCAAAGAGGTACACGAGG...AATATGGCTAGGGCATGTCCTATTCTTCTGGGCAAATGTGGATGAAAAGGTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
3UTR-3UTR GCA 90 bp AACACAGACATGACTACTTGCTTGTTTTGTCTGTGGCTGCCTTTGTGCTACAATGAAAGAAGATTAACCTaGCCAGTGCAGTGGCTCATG +
Preference number: 2 (lower is better)
Translates to: NTDMTTCLFCLWLPLCYNERRLT*PVQWLM
Trigger: CATGAGCCACTGCACTGGGCAGGTTAATCTTCTTTC...ATTGTAGCACAAAGGCAGCCACAGACAAAACAAGCAAGTAGTCATGTCTGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
3UTR-3UTR TCA 90 bp AGGAAAGCATTCCTCAAACCAAAGAAATCTTCCAACCAAAACATAGGTAACATTAGAATTGTCAACCCCTaGCTAAGGGACTTGGCCCGG +
Preference number: 2 (lower is better)
Translates to: RKAFLKPKKSSNQNIGNIRIVNP*LRDLAR
Trigger: CCGGGCCAAGTCCCTTAGTCAGGGGTTGACAATTCT...AATGTTACCTATGTTTTGGTTGGAAGATTTCTTTGGTTTGAGGAATGCTTTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
3UTR-3UTR TCA 90 bp AACACAGACATGACTACTTGCTTGTTTTGTCTGTGGCTGCCTTTGTGCTACAATTTGTGGTTCATCGGTTaGGAAACCCACATTAGATCC +
Preference number: 2 (lower is better)
Translates to: NTDMTTCLFCLWLPLCYNLWFIG*ETHIRS
Trigger: GGATCTAATGTGGGTTTCTCAACCGATGAACCACAA...ATTGTAGCACAAAGGCAGCCACAGACAAAACAAGCAAGTAGTCATGTCTGTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
3UTR-3UTR TCA 90 bp AACACAGACATGACTACTTGCTTGTTTTGTCTGTGGCTGCCTTTGTGCTACAATTGCAGGGAGTCATACTaGGCTTTTTCGTCTCATTTT +
Preference number: 2 (lower is better)
Translates to: NTDMTTCLFCLWLPLCYNCRESY*AFSSHF
Trigger: AAAATGAGACGAAAAAGCTCAGTATGACTCCCTGCA...ATTGTAGCACAAAGGCAGCCACAGACAAAACAAGCAAGTAGTCATGTCTGTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
3UTR-3UTR TCA 90 bp AACACAGACATGACTACTTGCTTGTTTTGTCTGTGGCTGCCTTTGTGCTACAATAAGAGCAGACTCTTTTaGAAGAAGATTAACCTGCCC +
Preference number: 2 (lower is better)
Translates to: NTDMTTCLFCLWLPLCYNKSRLF*KKINLP
Trigger: GGGCAGGTTAATCTTCTTTCAAAAGAGTCTGCTCTT...ATTGTAGCACAAAGGCAGCCACAGACAAAACAAGCAAGTAGTCATGTCTGTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
3UTR-3UTR CCA 90 bp CCCCTAAATCAGACTCTCGTGCAGAGTCTGATTTATATTTTCATGACCTGTGGACTAGAAGTTAGGACGTaGTTAACATTTCCCAAAGCC +
Preference number: 2 (lower is better)
Translates to: PLNQTLVQSLIYIFMTCGLEVRT*LTFPKA
Trigger: GGCTTTGGGAAATGTTAACCACGTCCTAACTTCTAG...TCCACAGGTCATGAAAATATAAATCAGACTCTGCACGAGAGTCTGATTTAGGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
3UTR-3UTR CCA 90 bp AACACAGACATGACTACTTGCTTGTTTTGTCTGTGGCTGCCTTTGTGCTACAATATTTGCTTCGCCAATTaGGTAGAAAGAGCAGACTCT +
Preference number: 2 (lower is better)
Translates to: NTDMTTCLFCLWLPLCYNICFAN*VERADS
Trigger: AGAGTCTGCTCTTTCTACCCAATTGGCGAAGCAAAT...ATTGTAGCACAAAGGCAGCCACAGACAAAACAAGCAAGTAGTCATGTCTGTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
3UTR-3UTR TCA 90 bp AGGAAAGCATTCCTCAAACCAAAGAAATCTTCCAACCAAAACATAGGTAACATTGATCCACTTTTCGTTTaGGCCATTGCTCATGTGCCC +
Preference number: 2 (lower is better)
Translates to: RKAFLKPKKSSNQNIGNIDPLFV*AIAHVP
Trigger: GGGCACATGAGCAATGGCTCAAACGAAAAGTGGATC...AATGTTACCTATGTTTTGGTTGGAAGATTTCTTTGGTTTGAGGAATGCTTTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
3UTR-3UTR CCA 90 bp AGGAAAGCATTCCTCAAACCAAAGAAATCTTCCAACCAAAACATAGGTAACATTTTGTTCGGTGAATCCTaGGGATTTGCTTCGCCAATT +
Preference number: 2 (lower is better)
Translates to: RKAFLKPKKSSNQNIGNILFGES*GFASPI
Trigger: AATTGGCGAAGCAAATCCCCAGGATTCACCGAACAA...AATGTTACCTATGTTTTGGTTGGAAGATTTCTTTGGTTTGAGGAATGCTTTCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
3UTR-3UTR CCA 90 bp AAATCATTTTCACTCATTGTCGTGGCTTTAGATGAAGAATTACTCTTCGAGACTGGAACAGGAAGTCAATaGCAGATGATTCTTCAAAGG +
Preference number: 2 (lower is better)
Translates to: KSFSLIVVALDEELLFETGTGSQ*QMILQR
Trigger: CCTTTGAAGAATCATCTGCCATTGACTTCCTGTTCC...AGTCTCGAAGAGTAATTCTTCATCTAAAGCCACGACAATGAGTGAAAATGATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460679.5
3UTR-3UTR TCA 90 bp TGCTTGAAATCATTTTCACTCATTGTCGTGGCTTTAGATGAAGAATTACTCTTCGAAGTCAATGGCAGATaGTTCTTCAAAGGAATTAGG +
Preference number: 2 (lower is better)
Translates to: CLKSFSLIVVALDEELLFEVNGR*FFKGIR
Trigger: CCTAATTCCTTTGAAGAATCATCTGCCATTGACTTC...GAAGAGTAATTCTTCATCTAAAGCCACGACAATGAGTGAAAATGATTTCAAGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460679.5
3UTR CAA 90 bp CAGACTCTCGTGCAGAGTCTGATTTATATTTTCATGACCTGTGGATaGACTTCACAATCAGTATGTTATATTTTAGTAACGTTCTCTAGA +
Preference number: 2 (lower is better)
Translates to: QTLVQSLIYIFMTCG*TSQSVCYILVTFSR
Trigger: TCTAGAGAACGTTACTAAAATATAACATACTGATTGTGAAGTCAATCCACAGGTCATGAAAATATAAATCAGACTCTGCACGAGAGTCTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
3UTR TCA 72 bp CATCCCTCCTTGTCCAAAAGCAGAATTGTCAACCCCTaGCTAAGGGACTTGGCCCGGAATGTCACTGCACAA +
Preference number: 3 (lower is better)
Translates to: HPSLSKSRIVNP*LRDLARNVTAQ
Trigger: TTGTGCAGTGACATTCCGGGCCAAGTCCCTTAGTCAGGGGTTGACAATTCTGCTTTTGGACAAGGAGGGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
3UTR-3UTR CAA 90 bp GTGAAGTCACCACTCCTGCAGGGAAAGGTATCTGCAAACTTGTGTAGGCTCCAGTCCTCGTGTACCTCTTaGCAAATGTCGGACAAAGCA +
Preference number: 3 (lower is better)
Translates to: VKSPLLQGKVSANLCRLQSSCTS*QMSDKA
Trigger: TGCTTTGTCCGACATTTGCAAAGAGGTACACGAGGA...CTGGAGCCTACACAAGTTTGCAGATACCTTTCCCTGCAGGAGTGGTGACTTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
3UTR-3UTR CAA 90 bp GTGCAAATCCTTGGGCATAAGACCCATCCCGCTTCCTCCTTTCTGTGGGTGTGTCATCTGTCAGAGTATTaGTTGGACCCCCTAAATCAG +
Preference number: 3 (lower is better)
Translates to: VQILGHKTHPASSFLWVCHLSEY*LDPLNQ
Trigger: CTGATTTAGGGGGTCCAACAAATACTCTGACAGATG...ACACACCCACAGAAAGGAGGAAGCGGGATGGGTCTTATGCCCAAGGATTTGCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
3UTR-3UTR CAA 90 bp AACACAGACATGACTACTTGCTTGTTTTGTCTGTGGCTGCCTTTGTGCTACAATAGGCAGGAGAAGTGCTaGAATCTGGGAGGCGGAGGG +
Preference number: 3 (lower is better)
Translates to: NTDMTTCLFCLWLPLCYNRQEKC*NLGGGG
Trigger: CCCTCCGCCTCCCAGATTCAAGCACTTCTCCTGCCT...ATTGTAGCACAAAGGCAGCCACAGACAAAACAAGCAAGTAGTCATGTCTGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
3UTR-3UTR CAA 90 bp GCCCACTGTGTTTCAAGAGGGGTACCAGATGCAGGGAGTCATACTGAGCTTTTTTCCTCGTGTACCTCTTaGCAAATGTCGGACAAAGCA +
Preference number: 3 (lower is better)
Translates to: AHCVSRGVPDAGSHTELFSSCTS*QMSDKA
Trigger: TGCTTTGTCCGACATTTGCAAAGAGGTACACGAGGA...AAAAAGCTCAGTATGACTCCCTGCATCTGGTACCCCTCTTGAAACACAGTGGGC
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
3UTR-3UTR CAA 90 bp GTGAAGTCACCACTCCTGCAGGGAAAGGTATCTGCAAACTTGTGTAGGCTCCAGCTGTCAGAGTATTTGTaGGACCCCCTAAATCAGACT +
Preference number: 3 (lower is better)
Translates to: VKSPLLQGKVSANLCRLQLSEYL*DPLNQT
Trigger: AGTCTGATTTAGGGGGTCCAACAAATACTCTGACAG...CTGGAGCCTACACAAGTTTGCAGATACCTTTCCCTGCAGGAGTGGTGACTTCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
3UTR TCA 72 bp CTAGGCACTCAGTGGGTGCTTAATCCATTTGTTCGGTaGATCCTGGGGATTTGCTTCGCCAATTGGGTAGAA +
Preference number: 3 (lower is better)
Translates to: LGTQWVLNPFVR*ILGICFANWVE
Trigger: TTCTACCCAATTGGCGAAGCAAATCCCCAGGATTCACCGAACAAATGGATTAAGCACCCACTGAGTGCCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
3UTR-3UTR CAA 90 bp GCCCACTGTGTTTCAAGAGGGGTACCAGATGCAGGGAGTCATACTGAGCTTTTTGGTGAAATAAGCCACTaGGGTTTGTGTTTGACCATC +
Preference number: 3 (lower is better)
Translates to: AHCVSRGVPDAGSHTELFGEISH*GLCLTI
Trigger: GATGGTCAAACACAAACCCAAGTGGCTTATTTCACC...AAAAAGCTCAGTATGACTCCCTGCATCTGGTACCCCTCTTGAAACACAGTGGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
3UTR-3UTR CAA 90 bp GTGAAGTCACCACTCCTGCAGGGAAAGGTATCTGCAAACTTGTGTAGGCTCCAGTTCATGACCTGTGGATaGACTTCACAATCAGTATGT +
Preference number: 3 (lower is better)
Translates to: VKSPLLQGKVSANLCRLQFMTCG*TSQSVC
Trigger: ACATACTGATTGTGAAGTCAATCCACAGGTCATGAA...CTGGAGCCTACACAAGTTTGCAGATACCTTTCCCTGCAGGAGTGGTGACTTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
3UTR-3UTR CAA 90 bp GTGACCTTTTCATCCACATTTGCCCAGAAGAATAGGACATGCCCTAGCCATATTACAAAGTGCAAATCCTaGGGCATAAGACCCATCCCG +
Preference number: 3 (lower is better)
Translates to: VTFSSTFAQKNRTCPSHITKCKS*GIRPIP
Trigger: CGGGATGGGTCTTATGCCCAAGGATTTGCACTTTGT...AATATGGCTAGGGCATGTCCTATTCTTCTGGGCAAATGTGGATGAAAAGGTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
3UTR GCA 72 bp GAAACCCACATTAGATCCACTTTTCGTTTGAGCCATTaGTCATGTGCCCACTGTGTTTCAAGAGGGGTACCA +
Preference number: 3 (lower is better)
Translates to: ETHIRSTFRLSH*SCAHCVSRGVP
Trigger: TGGTACCCCTCTTGAAACACAGTGGGCACATGAGCAATGGCTCAAACGAAAAGTGGATCTAATGTGGGTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
3UTR-3UTR CAA 90 bp GTGAAGTCACCACTCCTGCAGGGAAAGGTATCTGCAAACTTGTGTAGGCTCCAGGCATTTCTTTTGATGTaGCTTTTAGTTCCCAGGAAT +
Preference number: 3 (lower is better)
Translates to: VKSPLLQGKVSANLCRLQAFLLM*LLVPRN
Trigger: ATTCCTGGGAACTAAAAGCAACATCAAAAGAAATGC...CTGGAGCCTACACAAGTTTGCAGATACCTTTCCCTGCAGGAGTGGTGACTTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
3UTR-3UTR CAA 90 bp AACACAGACATGACTACTTGCTTGTTTTGTCTGTGGCTGCCTTTGTGCTACAATCCTCCACATCCCTCCTaGTCCAAAAGCAGAATTGTC +
Preference number: 3 (lower is better)
Translates to: NTDMTTCLFCLWLPLCYNPPHPS*SKSRIV
Trigger: GACAATTCTGCTTTTGGACAAGGAGGGATGTGGAGG...ATTGTAGCACAAAGGCAGCCACAGACAAAACAAGCAAGTAGTCATGTCTGTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
3UTR-3UTR CAA 90 bp GTGACCTTTTCATCCACATTTGCCCAGAAGAATAGGACATGCCCTAGCCATATTTTTTCGTTTGAGCCATaGCTCATGTGCCCACTGTGT +
Preference number: 3 (lower is better)
Translates to: VTFSSTFAQKNRTCPSHIFSFEP*LMCPLC
Trigger: ACACAGTGGGCACATGAGCAATGGCTCAAACGAAAA...AATATGGCTAGGGCATGTCCTATTCTTCTGGGCAAATGTGGATGAAAAGGTCAC
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
3UTR TCA 72 bp TCGGTTGAGAAACCCACATTAGATCCACTTTTCGTTTaGGCCATTGCTCATGTGCCCACTGTGTTTCAAGAG +
Preference number: 3 (lower is better)
Translates to: SVEKPTLDPLFV*AIAHVPTVFQE
Trigger: CTCTTGAAACACAGTGGGCACATGAGCAATGGCTCAAACGAAAAGTGGATCTAATGTGGGTTTCTCAACCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
3UTR TCA 72 bp ATGAAGAATTACTCTTCGAGACTGAGAGACCAGGATTaGGCCAGAAATCTGGGAACAGGAAGTCAATGGCAG +
Preference number: 3 (lower is better)
Translates to: MKNYSSRLRDQD*ARNLGTGSQWQ
Trigger: CTGCCATTGACTTCCTGTTCCCAGATTTCTGGCTCAATCCTGGTCTCTCAGTCTCGAAGAGTAATTCTTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460679.5
3UTR-3UTR CAA 90 bp GCCCACTGTGTTTCAAGAGGGGTACCAGATGCAGGGAGTCATACTGAGCTTTTTGCATTTCTTTTGATGTaGCTTTTAGTTCCCAGGAAT +
Preference number: 3 (lower is better)
Translates to: AHCVSRGVPDAGSHTELFAFLLM*LLVPRN
Trigger: ATTCCTGGGAACTAAAAGCAACATCAAAAGAAATGC...AAAAAGCTCAGTATGACTCCCTGCATCTGGTACCCCTCTTGAAACACAGTGGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
3UTR TCA 72 bp GGAAAGGTATCTGCAAACTTGTGTAGGCTCCAGTGGTaGGTTCTGATGTCAAAGTCACTGATCCTCTTCAAA +
Preference number: 3 (lower is better)
Translates to: GKVSANLCRLQW*VLMSKSLILFK
Trigger: TTTGAAGAGGATCAGTGACTTTGACATCAGAACTCACCACTGGAGCCTACACAAGTTTGCAGATACCTTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
3UTR TCA 72 bp CTGAAGAAGTTGATCTTGTGTGATGACAGGTATGTCTaGAGAGGCGTCTTTCAGAGTCATCTATCCTCTTGG +
Preference number: 3 (lower is better)
Translates to: LKKLILCDDRYV*RGVFQSHLSSW
Trigger: CCAAGAGGATAGATGACTCTGAAAGACGCCTCTTCAGACATACCTGTCATCACACAAGATCAACTTCTTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
3UTR CCA 72 bp TTGCTTGTTTTGTCTGTGGCTGCCTTTGTGCTACAATaGCAGAGTCAAGTAGTTGTTAACAGGGACCTTATG +
Preference number: 3 (lower is better)
Translates to: LLVLSVAAFVLQ*QSQVVVNRDLM
Trigger: CATAAGGTCCCTGTTAACAACTACTTGACTCTGCCATTGTAGCACAAAGGCAGCCACAGACAAAACAAGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
3UTR-3UTR CAA 90 bp AACACAGACATGACTACTTGCTTGTTTTGTCTGTGGCTGCCTTTGTGCTACAATCATCTGTCAGAGTATTaGTTGGACCCCCTAAATCAG +
Preference number: 3 (lower is better)
Translates to: NTDMTTCLFCLWLPLCYNHLSEY*LDPLNQ
Trigger: CTGATTTAGGGGGTCCAACAAATACTCTGACAGATG...ATTGTAGCACAAAGGCAGCCACAGACAAAACAAGCAAGTAGTCATGTCTGTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
3UTR-3UTR CAA 90 bp GTGACCTTTTCATCCACATTTGCCCAGAAGAATAGGACATGCCCTAGCCATATTTTCATGACCTGTGGATaGACTTCACAATCAGTATGT +
Preference number: 3 (lower is better)
Translates to: VTFSSTFAQKNRTCPSHIFMTCG*TSQSVC
Trigger: ACATACTGATTGTGAAGTCAATCCACAGGTCATGAA...AATATGGCTAGGGCATGTCCTATTCTTCTGGGCAAATGTGGATGAAAAGGTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
3UTR TCA 72 bp TGTAATAGTAGCTGGAAGCTTTTGTGGTTCATCGGTTaGGAAACCCACATTAGATCCACTTTTCGTTTGAGC +
Preference number: 3 (lower is better)
Translates to: CNSSWKLLWFIG*ETHIRSTFRLS
Trigger: GCTCAAACGAAAAGTGGATCTAATGTGGGTTTCTCAACCGATGAACCACAAAAGCTTCCAGCTACTATTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
3UTR TCA 72 bp TTAACCATCATGTTCATAGTTGTCAAAGGTAGCAAGTaGCCTTTTCATCCACATTTGCCCAGAAGAATAGGA +
Preference number: 3 (lower is better)
Translates to: LTIMFIVVKGSK*PFHPHLPRRIG
Trigger: TCCTATTCTTCTGGGCAAATGTGGATGAAAAGGTCACTTGCTACCTTTGACAACTATGAACATGATGGTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
3UTR GCA 72 bp AATGAAATACCAATTCCATTTCCTCGTGTACCTCTTTaGAAATGTCGGACAAAGCAGAGTTTTATAATAGTT +
Preference number: 3 (lower is better)
Translates to: NEIPIPFPRVPL*KCRTKQSFIIV
Trigger: AACTATTATAAAACTCTGCTTTGTCCGACATTTGCAAAGAGGTACACGAGGAAATGGAATTGGTATTTCATT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR TCA 90 bp GGTTCAAGTGATTCTCCTGTCTCCCAAGCAGCTGGAACTGCAGGCACATGCCACGGCAGCCGGCTGCTCTaGGGAGGTCGAGGGTCCCGG +
Preference number: 4 (lower is better)
Translates to: GSSDSPVSQAAGTAGTCHGSRLL*GGRGSR
Trigger: CCGGGACCCTCGACCTCCTCAGAGCAGCCGGCTGCC...GTGGCATGTGCCTGCAGTTCCAGCTGCTTGGGAGACAGGAGAATCACTTGAACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400532.5
CDS-3UTR GCA 90 bp GGTTCAAGTGATTCTCCTGTCTCCCAAGCAGCTGGAACTGCAGGCACATGCCACTGGTCCGCGCGGGGCTaGCAGCTGTCCCCAGGGCGA +
Preference number: 4 (lower is better)
Translates to: GSSDSPVSQAAGTAGTCHWSARG*QLSPGR
Trigger: TCGCCCTGGGGACAGCTGGCAGCCCCGCGCGGACCA...GTGGCATGTGCCTGCAGTTCCAGCTGCTTGGGAGACAGGAGAATCACTTGAACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400532.5
CDS-3UTR GCA 90 bp CGGGTTCAAGTGATTCTCCTGTCTCCCAAGCAGCTGGAACTGCAGGCACATGCCGGGGCGGCAGCCGGCTaGTCTGAGGAGGTCGAGGGT +
Preference number: 4 (lower is better)
Translates to: RVQVILLSPKQLELQAHAGAAAG*SEEVEG
Trigger: ACCCTCGACCTCCTCAGAGCAGCCGGCTGCCGCCCC...GGCATGTGCCTGCAGTTCCAGCTGCTTGGGAGACAGGAGAATCACTTGAACCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400532.5
CDS-3UTR TCA 90 bp CGGGTTCAAGTGATTCTCCTGTCTCCCAAGCAGCTGGAACTGCAGGCACATGCCGAGGCCGGGGGCCCTTaGACTTCTGGGGCGGGAAAG +
Preference number: 4 (lower is better)
Translates to: RVQVILLSPKQLELQAHAEAGGP*TSGAGK
Trigger: CTTTCCCGCCCCAGAAGTTCAAGGGCCCCCGGCCTC...GGCATGTGCCTGCAGTTCCAGCTGCTTGGGAGACAGGAGAATCACTTGAACCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400532.5
CDS-3UTR GCA 90 bp GTGCAAATCCTTGGGCATAAGACCCATCCCGCTTCCTCCTTTCTGTGGGTGTGTTGGTCCGCGCGGGGCTaGCAGCTGTCCCCAGGGCGA +
Preference number: 4 (lower is better)
Translates to: VQILGHKTHPASSFLWVCWSARG*QLSPGR
Trigger: TCGCCCTGGGGACAGCTGGCAGCCCCGCGCGGACCA...ACACACCCACAGAAAGGAGGAAGCGGGATGGGTCTTATGCCCAAGGATTTGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR CCA 90 bp GGTTCAAGTGATTCTCCTGTCTCCCAAGCAGCTGGAACTGCAGGCACATGCCACCGGGCAGGCTGGGGGTaGGGGGATTGGGTGTCTCGG +
Preference number: 4 (lower is better)
Translates to: GSSDSPVSQAAGTAGTCHRAGWG*GDWVSR
Trigger: CCGAGACACCCAATCCCCCCACCCCCAGCCTGCCCG...GTGGCATGTGCCTGCAGTTCCAGCTGCTTGGGAGACAGGAGAATCACTTGAACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000400532.5
CDS-3UTR CCA 90 bp CGGGTTCAAGTGATTCTCCTGTCTCCCAAGCAGCTGGAACTGCAGGCACATGCCGGGCGCCTTCTCAGCTaGCTGCCAAGAGGCGGGTCC +
Preference number: 4 (lower is better)
Translates to: RVQVILLSPKQLELQAHAGRLLS*LPRGGS
Trigger: GGACCCGCCTCTTGGCAGCCAGCTGAGAAGGCGCCC...GGCATGTGCCTGCAGTTCCAGCTGCTTGGGAGACAGGAGAATCACTTGAACCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400532.5
CDS-3UTR CCA 90 bp CGGGTTCAAGTGATTCTCCTGTCTCCCAAGCAGCTGGAACTGCAGGCACATGCCGATCGGCTTTGTGTCTaGTCCGCGCGGGGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: RVQVILLSPKQLELQAHADRLCV*SARGCQ
Trigger: CTGGCAGCCCCGCGCGGACCAGACACAAAGCCGATC...GGCATGTGCCTGCAGTTCCAGCTGCTTGGGAGACAGGAGAATCACTTGAACCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400532.5
CDS-3UTR GCA 90 bp GTGAAGTCACCACTCCTGCAGGGAAAGGTATCTGCAAACTTGTGTAGGCTCCAGGGGGCGGCAGCCGGCTaGTCTGAGGAGGTCGAGGGT +
Preference number: 4 (lower is better)
Translates to: VKSPLLQGKVSANLCRLQGAAAG*SEEVEG
Trigger: ACCCTCGACCTCCTCAGAGCAGCCGGCTGCCGCCCC...CTGGAGCCTACACAAGTTTGCAGATACCTTTCCCTGCAGGAGTGGTGACTTCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR GCA 90 bp GGTTCAAGTGATTCTCCTGTCTCCCAAGCAGCTGGAACTGCAGGCACATGCCACGCCTTCTCAGCTGGCTaGCAAGAGGCGGGTCCTCCA +
Preference number: 4 (lower is better)
Translates to: GSSDSPVSQAAGTAGTCHAFSAG*QEAGPP
Trigger: TGGAGGACCCGCCTCTTGGCAGCCAGCTGAGAAGGC...GTGGCATGTGCCTGCAGTTCCAGCTGCTTGGGAGACAGGAGAATCACTTGAACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400532.5
CDS-3UTR TCA 90 bp GGTTCAAGTGATTCTCCTGTCTCCCAAGCAGCTGGAACTGCAGGCACATGCCACCCACGCCTCCGGGATTaGTCGGCTTTGTGTCTGGTC +
Preference number: 4 (lower is better)
Translates to: GSSDSPVSQAAGTAGTCHPRLRD*SALCLV
Trigger: GACCAGACACAAAGCCGATCAATCCCGGAGGCGTGG...GTGGCATGTGCCTGCAGTTCCAGCTGCTTGGGAGACAGGAGAATCACTTGAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400532.5
CDS-3UTR TCA 90 bp CGGGTTCAAGTGATTCTCCTGTCTCCCAAGCAGCTGGAACTGCAGGCACATGCCTGGACTGCAGTGGCGTaGTCTCAGCTCACTGCAACC +
Preference number: 4 (lower is better)
Translates to: RVQVILLSPKQLELQAHAWTAVA*SQLTAT
Trigger: GGTTGCAGTGAGCTGAGATCACGCCACTGCAGTCCA...GGCATGTGCCTGCAGTTCCAGCTGCTTGGGAGACAGGAGAATCACTTGAACCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400532.5
CDS-3UTR GCA 90 bp GAAATGAGACCAGAGGTTCCTTTTGCATCTGTCAGAGTATTTGTTGGACCCCCTTGGTCCGCGCGGGGCTaGCAGCTGTCCCCAGGGCGA +
Preference number: 4 (lower is better)
Translates to: EMRPEVPFASVRVFVGPPWSARG*QLSPGR
Trigger: TCGCCCTGGGGACAGCTGGCAGCCCCGCGCGGACCA...AGGGGGTCCAACAAATACTCTGACAGATGCAAAAGGAACCTCTGGTCTCATTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR CCA 90 bp GCCCACTGTGTTTCAAGAGGGGTACCAGATGCAGGGAGTCATACTGAGCTTTTTGGGCGCCTTCTCAGCTaGCTGCCAAGAGGCGGGTCC +
Preference number: 4 (lower is better)
Translates to: AHCVSRGVPDAGSHTELFGRLLS*LPRGGS
Trigger: GGACCCGCCTCTTGGCAGCCAGCTGAGAAGGCGCCC...AAAAAGCTCAGTATGACTCCCTGCATCTGGTACCCCTCTTGAAACACAGTGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR CCA 90 bp GGTTCAAGTGATTCTCCTGTCTCCCAAGCAGCTGGAACTGCAGGCACATGCCACGGGCCCTTGAACTTCTaGGGCGGGAAAGGAGCAGAG +
Preference number: 4 (lower is better)
Translates to: GSSDSPVSQAAGTAGTCHGPLNF*GGKGAE
Trigger: CTCTGCTCCTTTCCCGCCCCAGAAGTTCAAGGGCCC...GTGGCATGTGCCTGCAGTTCCAGCTGCTTGGGAGACAGGAGAATCACTTGAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400532.5
CDS-3UTR CCA 90 bp CGGGTTCAAGTGATTCTCCTGTCTCCCAAGCAGCTGGAACTGCAGGCACATGCCAGGGACGGCTCTAGATaGGATGTCAGTTTCCCCCTC +
Preference number: 4 (lower is better)
Translates to: RVQVILLSPKQLELQAHARDGSR*DVSFPL
Trigger: GAGGGGGAAACTGACATCCCATCTAGAGCCGTCCCT...GGCATGTGCCTGCAGTTCCAGCTGCTTGGGAGACAGGAGAATCACTTGAACCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400532.5
CDS-3UTR TCA 90 bp CCCCTAAATCAGACTCTCGTGCAGAGTCTGATTTATATTTTCATGACCTGTGGAGGCAGCCGGCTGCTCTaGGGAGGTCGAGGGTCCCGG +
Preference number: 4 (lower is better)
Translates to: PLNQTLVQSLIYIFMTCGGSRLL*GGRGSR
Trigger: CCGGGACCCTCGACCTCCTCAGAGCAGCCGGCTGCC...TCCACAGGTCATGAAAATATAAATCAGACTCTGCACGAGAGTCTGATTTAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR TCA 90 bp AATACCAATTCCATTTCCTCGTGTACCTCTTTGCAAATGTCGGACAAAGCAGAGGGCAGCCGGCTGCTCTaGGGAGGTCGAGGGTCCCGG +
Preference number: 4 (lower is better)
Translates to: NTNSISSCTSLQMSDKAEGSRLL*GGRGSR
Trigger: CCGGGACCCTCGACCTCCTCAGAGCAGCCGGCTGCC...CTCTGCTTTGTCCGACATTTGCAAAGAGGTACACGAGGAAATGGAATTGGTATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR TCA 90 bp GGTTCAAGTGATTCTCCTGTCTCCCAAGCAGCTGGAACTGCAGGCACATGCCACAGAGGGTACTTCACATaGTGGAACTGCTGGAGCCAC +
Preference number: 4 (lower is better)
Translates to: GSSDSPVSQAAGTAGTCHRGYFT*WNCWSH
Trigger: GTGGCTCCAGCAGTTCCATCATGTGAAGTACCCTCT...GTGGCATGTGCCTGCAGTTCCAGCTGCTTGGGAGACAGGAGAATCACTTGAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400532.5
CDS-3UTR GCA 90 bp CGGGTTCAAGTGATTCTCCTGTCTCCCAAGCAGCTGGAACTGCAGGCACATGCCTCCAGGTTTTGGCCTTaGTCAGATGGGGCACTAACT +
Preference number: 4 (lower is better)
Translates to: RVQVILLSPKQLELQAHASRFWP*SDGALT
Trigger: AGTTAGTGCCCCATCTGAGCAAGGCCAAAACCTGGA...GGCATGTGCCTGCAGTTCCAGCTGCTTGGGAGACAGGAGAATCACTTGAACCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400532.5
CDS-3UTR GCA 90 bp GTGCAAATCCTTGGGCATAAGACCCATCCCGCTTCCTCCTTTCTGTGGGTGTGTCTGAGGCAGGAGAAGTaGTTGAATCTGGGAGGCGGA +
Preference number: 4 (lower is better)
Translates to: VQILGHKTHPASSFLWVCLRQEK*LNLGGG
Trigger: TCCGCCTCCCAGATTCAAGCACTTCTCCTGCCTCAG...ACACACCCACAGAAAGGAGGAAGCGGGATGGGTCTTATGCCCAAGGATTTGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR CCA 90 bp AATACCAATTCCATTTCCTCGTGTACCTCTTTGCAAATGTCGGACAAAGCAGAGCGGGCAGGCTGGGGGTaGGGGGATTGGGTGTCTCGG +
Preference number: 4 (lower is better)
Translates to: NTNSISSCTSLQMSDKAERAGWG*GDWVSR
Trigger: CCGAGACACCCAATCCCCCCACCCCCAGCCTGCCCG...CTCTGCTTTGTCCGACATTTGCAAAGAGGTACACGAGGAAATGGAATTGGTATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR CCA 90 bp GTTGGACCCCCTAAATCAGACTCTCGTGCAGAGTCTGATTTATATTTTCATGACCGGGCAGGCTGGGGGTaGGGGGATTGGGTGTCTCGG +
Preference number: 4 (lower is better)
Translates to: VGPPKSDSRAESDLYFHDRAGWG*GDWVSR
Trigger: CCGAGACACCCAATCCCCCCACCCCCAGCCTGCCCG...GTCATGAAAATATAAATCAGACTCTGCACGAGAGTCTGATTTAGGGGGTCCAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR CCA 90 bp GTGACCTTTTCATCCACATTTGCCCAGAAGAATAGGACATGCCCTAGCCATATTGGGCGCCTTCTCAGCTaGCTGCCAAGAGGCGGGTCC +
Preference number: 4 (lower is better)
Translates to: VTFSSTFAQKNRTCPSHIGRLLS*LPRGGS
Trigger: GGACCCGCCTCTTGGCAGCCAGCTGAGAAGGCGCCC...AATATGGCTAGGGCATGTCCTATTCTTCTGGGCAAATGTGGATGAAAAGGTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR CCA 90 bp CGGGTTCAAGTGATTCTCCTGTCTCCCAAGCAGCTGGAACTGCAGGCACATGCCTTGGCCTTGCTCAGATaGGGCACTAACTTCACAACG +
Preference number: 4 (lower is better)
Translates to: RVQVILLSPKQLELQAHALALLR*GTNFTT
Trigger: CGTTGTGAAGTTAGTGCCCCATCTGAGCAAGGCCAA...GGCATGTGCCTGCAGTTCCAGCTGCTTGGGAGACAGGAGAATCACTTGAACCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400532.5
CDS-3UTR CCA 90 bp GGTTCAAGTGATTCTCCTGTCTCCCAAGCAGCTGGAACTGCAGGCACATGCCACTCCTCTTCCAGGTTTTaGCCTTGCTCAGATGGGGCA +
Preference number: 4 (lower is better)
Translates to: GSSDSPVSQAAGTAGTCHSSSRF*PCSDGA
Trigger: TGCCCCATCTGAGCAAGGCCAAAACCTGGAAGAGGA...GTGGCATGTGCCTGCAGTTCCAGCTGCTTGGGAGACAGGAGAATCACTTGAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400532.5
CDS-3UTR TCA 90 bp GTTGGACCCCCTAAATCAGACTCTCGTGCAGAGTCTGATTTATATTTTCATGACGAGGCCGGGGGCCCTTaGACTTCTGGGGCGGGAAAG +
Preference number: 4 (lower is better)
Translates to: VGPPKSDSRAESDLYFHDEAGGP*TSGAGK
Trigger: CTTTCCCGCCCCAGAAGTTCAAGGGCCCCCGGCCTC...GTCATGAAAATATAAATCAGACTCTGCACGAGAGTCTGATTTAGGGGGTCCAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR GCA 90 bp GGTTCAAGTGATTCTCCTGTCTCCCAAGCAGCTGGAACTGCAGGCACATGCCACTGTATGAGCTGTTGGTaGTTTGGGAGCCAAGTCTGG +
Preference number: 4 (lower is better)
Translates to: GSSDSPVSQAAGTAGTCHCMSCW*FGSQVW
Trigger: CCAGACTTGGCTCCCAAAGCACCAACAGCTCATACA...GTGGCATGTGCCTGCAGTTCCAGCTGCTTGGGAGACAGGAGAATCACTTGAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400532.5
CDS-3UTR GCA 90 bp GCCCACTGTGTTTCAAGAGGGGTACCAGATGCAGGGAGTCATACTGAGCTTTTTAGGCAAATCCTGTGGTaGACACCTGTGGGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: AHCVSRGVPDAGSHTELFRQILW*TPVGSS
Trigger: GCTGGAGCCCACAGGTGTGCACCACAGGATTTGCCT...AAAAAGCTCAGTATGACTCCCTGCATCTGGTACCCCTCTTGAAACACAGTGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR CCA 90 bp CGGGTTCAAGTGATTCTCCTGTCTCCCAAGCAGCTGGAACTGCAGGCACATGCCGGGGTTTCACCATATTaGCCAGACTGGTCTAGAACT +
Preference number: 4 (lower is better)
Translates to: RVQVILLSPKQLELQAHAGVSPY*PDWSRT
Trigger: AGTTCTAGACCAGTCTGGCCAATATGGTGAAACCCC...GGCATGTGCCTGCAGTTCCAGCTGCTTGGGAGACAGGAGAATCACTTGAACCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400532.5
CDS-3UTR TCA 90 bp GAAATGAGACCAGAGGTTCCTTTTGCATCTGTCAGAGTATTTGTTGGACCCCCTCCACGCCTCCGGGATTaGTCGGCTTTGTGTCTGGTC +
Preference number: 4 (lower is better)
Translates to: EMRPEVPFASVRVFVGPPPRLRD*SALCLV
Trigger: GACCAGACACAAAGCCGATCAATCCCGGAGGCGTGG...AGGGGGTCCAACAAATACTCTGACAGATGCAAAAGGAACCTCTGGTCTCATTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR TCA 90 bp CGGGTTCAAGTGATTCTCCTGTCTCCCAAGCAGCTGGAACTGCAGGCACATGCCGGTACTCTACTGCTGTaGCTACTTGTTGGTCTTTTG +
Preference number: 4 (lower is better)
Translates to: RVQVILLSPKQLELQAHAGTLLL*LLVGLL
Trigger: CAAAAGACCAACAAGTAGTCACAGCAGTAGAGTACC...GGCATGTGCCTGCAGTTCCAGCTGCTTGGGAGACAGGAGAATCACTTGAACCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400532.5
CDS-3UTR GCA 90 bp GTGACCTTTTCATCCACATTTGCCCAGAAGAATAGGACATGCCCTAGCCATATTGCCTTCTCAGCTGGCTaGCAAGAGGCGGGTCCTCCA +
Preference number: 4 (lower is better)
Translates to: VTFSSTFAQKNRTCPSHIAFSAG*QEAGPP
Trigger: TGGAGGACCCGCCTCTTGGCAGCCAGCTGAGAAGGC...AATATGGCTAGGGCATGTCCTATTCTTCTGGGCAAATGTGGATGAAAAGGTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR GCA 90 bp GGTTCAAGTGATTCTCCTGTCTCCCAAGCAGCTGGAACTGCAGGCACATGCCACGTTTCCCAGGACACCTaGGATATCCAACAGAATTGC +
Preference number: 4 (lower is better)
Translates to: GSSDSPVSQAAGTAGTCHVSQDT*DIQQNC
Trigger: GCAATTCTGTTGGATATCGCAGGTGTCCTGGGAAAC...GTGGCATGTGCCTGCAGTTCCAGCTGCTTGGGAGACAGGAGAATCACTTGAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400532.5
CDS-3UTR GCA 90 bp GTGCAAATCCTTGGGCATAAGACCCATCCCGCTTCCTCCTTTCTGTGGGTGTGTGAGCCATTGCTCATGTaGCCACTGTGTTTCAAGAGG +
Preference number: 4 (lower is better)
Translates to: VQILGHKTHPASSFLWVCEPLLM*PLCFKR
Trigger: CCTCTTGAAACACAGTGGGCACATGAGCAATGGCTC...ACACACCCACAGAAAGGAGGAAGCGGGATGGGTCTTATGCCCAAGGATTTGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR GCA 90 bp GCCCACTGTGTTTCAAGAGGGGTACCAGATGCAGGGAGTCATACTGAGCTTTTTCTGAGGCAGGAGAAGTaGTTGAATCTGGGAGGCGGA +
Preference number: 4 (lower is better)
Translates to: AHCVSRGVPDAGSHTELFLRQEK*LNLGGG
Trigger: TCCGCCTCCCAGATTCAAGCACTTCTCCTGCCTCAG...AAAAAGCTCAGTATGACTCCCTGCATCTGGTACCCCTCTTGAAACACAGTGGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR GCA 90 bp CGGGTTCAAGTGATTCTCCTGTCTCCCAAGCAGCTGGAACTGCAGGCACATGCCCTCTTGGTACTCTACTaGTGTGACTACTTGTTGGTC +
Preference number: 4 (lower is better)
Translates to: RVQVILLSPKQLELQAHALLVLY*CDYLLV
Trigger: GACCAACAAGTAGTCACAGCAGTAGAGTACCAAGAG...GGCATGTGCCTGCAGTTCCAGCTGCTTGGGAGACAGGAGAATCACTTGAACCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400532.5
CDS-3UTR CCA 90 bp CCCCTAAATCAGACTCTCGTGCAGAGTCTGATTTATATTTTCATGACCTGTGGAGATCGGCTTTGTGTCTaGTCCGCGCGGGGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: PLNQTLVQSLIYIFMTCGDRLCV*SARGCQ
Trigger: CTGGCAGCCCCGCGCGGACCAGACACAAAGCCGATC...TCCACAGGTCATGAAAATATAAATCAGACTCTGCACGAGAGTCTGATTTAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR TCA 90 bp GGTTCAAGTGATTCTCCTGTCTCCCAAGCAGCTGGAACTGCAGGCACATGCCACCTAATACTTCCAGAGTaGCTGTATCCTCTTCCAGGT +
Preference number: 4 (lower is better)
Translates to: GSSDSPVSQAAGTAGTCHLILPE*LYPLPG
Trigger: ACCTGGAAGAGGATACAGTCACTCTGGAAGTATTAG...GTGGCATGTGCCTGCAGTTCCAGCTGCTTGGGAGACAGGAGAATCACTTGAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400532.5
CDS-3UTR TCA 90 bp GCCCACTGTGTTTCAAGAGGGGTACCAGATGCAGGGAGTCATACTGAGCTTTTTAGAGGGTACTTCACATaGTGGAACTGCTGGAGCCAC +
Preference number: 4 (lower is better)
Translates to: AHCVSRGVPDAGSHTELFRGYFT*WNCWSH
Trigger: GTGGCTCCAGCAGTTCCATCATGTGAAGTACCCTCT...AAAAAGCTCAGTATGACTCCCTGCATCTGGTACCCCTCTTGAAACACAGTGGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR TCA 90 bp GGTTCAAGTGATTCTCCTGTCTCCCAAGCAGCTGGAACTGCAGGCACATGCCACTTCCCTTCTTTGTCTTaGCATCGTAGCTCTACCACA +
Preference number: 4 (lower is better)
Translates to: GSSDSPVSQAAGTAGTCHFPSLS*HRSSTT
Trigger: TGTGGTAGAGCTACGATGTCAAGACAAAGAAGGGAA...GTGGCATGTGCCTGCAGTTCCAGCTGCTTGGGAGACAGGAGAATCACTTGAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400532.5
CDS-3UTR TCA 90 bp GTGCAAATCCTTGGGCATAAGACCCATCCCGCTTCCTCCTTTCTGTGGGTGTGTTGTACTTCACCACCATaGGTTGGGAATCTATGCCTG +
Preference number: 4 (lower is better)
Translates to: VQILGHKTHPASSFLWVCCTSPP*VGNLCL
Trigger: CAGGCATAGATTCCCAACTCATGGTGGTGAAGTACA...ACACACCCACAGAAAGGAGGAAGCGGGATGGGTCTTATGCCCAAGGATTTGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR GCA 90 bp GTGAAGTCACCACTCCTGCAGGGAAAGGTATCTGCAAACTTGTGTAGGCTCCAGTCCAGGTTTTGGCCTTaGTCAGATGGGGCACTAACT +
Preference number: 4 (lower is better)
Translates to: VKSPLLQGKVSANLCRLQSRFWP*SDGALT
Trigger: AGTTAGTGCCCCATCTGAGCAAGGCCAAAACCTGGA...CTGGAGCCTACACAAGTTTGCAGATACCTTTCCCTGCAGGAGTGGTGACTTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR GCA 90 bp GTGAAGTCACCACTCCTGCAGGGAAAGGTATCTGCAAACTTGTGTAGGCTCCAGTGTATGAGCTGTTGGTaGTTTGGGAGCCAAGTCTGG +
Preference number: 4 (lower is better)
Translates to: VKSPLLQGKVSANLCRLQCMSCW*FGSQVW
Trigger: CCAGACTTGGCTCCCAAAGCACCAACAGCTCATACA...CTGGAGCCTACACAAGTTTGCAGATACCTTTCCCTGCAGGAGTGGTGACTTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR GCA 90 bp CGGGTTCAAGTGATTCTCCTGTCTCCCAAGCAGCTGGAACTGCAGGCACATGCCCACAACTACTACGGCTaGTATGATGCCACTTATGTT +
Preference number: 4 (lower is better)
Translates to: RVQVILLSPKQLELQAHAHNYYG*YDATYV
Trigger: AACATAAGTGGCATCATAGCAGCCGTAGTAGTTGTG...GGCATGTGCCTGCAGTTCCAGCTGCTTGGGAGACAGGAGAATCACTTGAACCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400532.5
CDS-3UTR GCA 90 bp GTGCAAATCCTTGGGCATAAGACCCATCCCGCTTCCTCCTTTCTGTGGGTGTGTCCTCGTGTACCTCTTTaGAAATGTCGGACAAAGCAG +
Preference number: 4 (lower is better)
Translates to: VQILGHKTHPASSFLWVCPRVPL*KCRTKQ
Trigger: CTGCTTTGTCCGACATTTGCAAAGAGGTACACGAGG...ACACACCCACAGAAAGGAGGAAGCGGGATGGGTCTTATGCCCAAGGATTTGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR GCA 90 bp GTGCAAATCCTTGGGCATAAGACCCATCCCGCTTCCTCCTTTCTGTGGGTGTGTGAAAGAAGATTAACCTaGCCAGTGCAGTGGCTCATG +
Preference number: 4 (lower is better)
Translates to: VQILGHKTHPASSFLWVCERRLT*PVQWLM
Trigger: CATGAGCCACTGCACTGGGCAGGTTAATCTTCTTTC...ACACACCCACAGAAAGGAGGAAGCGGGATGGGTCTTATGCCCAAGGATTTGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR CCA 90 bp GGTTCAAGTGATTCTCCTGTCTCCCAAGCAGCTGGAACTGCAGGCACATGCCACTACTTGTTGGTCTTTTaGGGCAGAAAACCCATAGGC +
Preference number: 4 (lower is better)
Translates to: GSSDSPVSQAAGTAGTCHYLLVF*GRKPIG
Trigger: GCCTATGGGTTTTCTGCCCCAAAAGACCAACAAGTA...GTGGCATGTGCCTGCAGTTCCAGCTGCTTGGGAGACAGGAGAATCACTTGAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400532.5
CDS-3UTR CCA 90 bp GCCCACTGTGTTTCAAGAGGGGTACCAGATGCAGGGAGTCATACTGAGCTTTTTTCCTCTTCCAGGTTTTaGCCTTGCTCAGATGGGGCA +
Preference number: 4 (lower is better)
Translates to: AHCVSRGVPDAGSHTELFSSSRF*PCSDGA
Trigger: TGCCCCATCTGAGCAAGGCCAAAACCTGGAAGAGGA...AAAAAGCTCAGTATGACTCCCTGCATCTGGTACCCCTCTTGAAACACAGTGGGC
51% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR CCA 90 bp GCCCACTGTGTTTCAAGAGGGGTACCAGATGCAGGGAGTCATACTGAGCTTTTTACAAGAAGGAAGCAGTaGCAAGCAGCAGTAGGGGTG +
Preference number: 4 (lower is better)
Translates to: AHCVSRGVPDAGSHTELFTRRKQ*QAAVGV
Trigger: CACCCCTACTGCTGCTTGCCACTGCTTCCTTCTTGT...AAAAAGCTCAGTATGACTCCCTGCATCTGGTACCCCTCTTGAAACACAGTGGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR CCA 90 bp GTGACCTTTTCATCCACATTTGCCCAGAAGAATAGGACATGCCCTAGCCATATTGGAGCATCTTCCCGGTaGCCTGGTGTCCAGGCACAT +
Preference number: 4 (lower is better)
Translates to: VTFSSTFAQKNRTCPSHIGASSR*PGVQAH
Trigger: ATGTGCCTGGACACCAGGCCACCGGGAAGATGCTCC...AATATGGCTAGGGCATGTCCTATTCTTCTGGGCAAATGTGGATGAAAAGGTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR TCA 90 bp AATACCAATTCCATTTCCTCGTGTACCTCTTTGCAAATGTCGGACAAAGCAGAGCCACGCCTCCGGGATTaGTCGGCTTTGTGTCTGGTC +
Preference number: 4 (lower is better)
Translates to: NTNSISSCTSLQMSDKAEPRLRD*SALCLV
Trigger: GACCAGACACAAAGCCGATCAATCCCGGAGGCGTGG...CTCTGCTTTGTCCGACATTTGCAAAGAGGTACACGAGGAAATGGAATTGGTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR TCA 90 bp GGTTCAAGTGATTCTCCTGTCTCCCAAGCAGCTGGAACTGCAGGCACATGCCACTGTATTCATTGTGTATaGGCTGTTGGTGCTTTGGGA +
Preference number: 4 (lower is better)
Translates to: GSSDSPVSQAAGTAGTCHCIHCV*AVGALG
Trigger: TCCCAAAGCACCAACAGCTCATACACAATGAATACA...GTGGCATGTGCCTGCAGTTCCAGCTGCTTGGGAGACAGGAGAATCACTTGAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400532.5
CDS-3UTR TCA 90 bp GGTTCAAGTGATTCTCCTGTCTCCCAAGCAGCTGGAACTGCAGGCACATGCCACGAAGGAGGTTTCTTTTaGAAAGTAGCCTTTCCTCTG +
Preference number: 4 (lower is better)
Translates to: GSSDSPVSQAAGTAGTCHEGGFF*KVAFPL
Trigger: CAGAGGAAAGGCTACTTTTCAAAAGAAACCTCCTTC...GTGGCATGTGCCTGCAGTTCCAGCTGCTTGGGAGACAGGAGAATCACTTGAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400532.5
CDS-3UTR TCA 90 bp GTGCAAATCCTTGGGCATAAGACCCATCCCGCTTCCTCCTTTCTGTGGGTGTGTAATCCATTTGTTCGGTaGATCCTGGGGATTTGCTTC +
Preference number: 4 (lower is better)
Translates to: VQILGHKTHPASSFLWVCNPFVR*ILGICF
Trigger: GAAGCAAATCCCCAGGATTCACCGAACAAATGGATT...ACACACCCACAGAAAGGAGGAAGCGGGATGGGTCTTATGCCCAAGGATTTGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR GCA 90 bp AGGAAAGCATTCCTCAAACCAAAGAAATCTTCCAACCAAAACATAGGTAACATTGGGGCGGCAGCCGGCTaGTCTGAGGAGGTCGAGGGT +
Preference number: 4 (lower is better)
Translates to: RKAFLKPKKSSNQNIGNIGAAAG*SEEVEG
Trigger: ACCCTCGACCTCCTCAGAGCAGCCGGCTGCCGCCCC...AATGTTACCTATGTTTTGGTTGGAAGATTTCTTTGGTTTGAGGAATGCTTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR GCA 90 bp GCCCACTGTGTTTCAAGAGGGGTACCAGATGCAGGGAGTCATACTGAGCTTTTTTCCAGGTTTTGGCCTTaGTCAGATGGGGCACTAACT +
Preference number: 4 (lower is better)
Translates to: AHCVSRGVPDAGSHTELFSRFWP*SDGALT
Trigger: AGTTAGTGCCCCATCTGAGCAAGGCCAAAACCTGGA...AAAAAGCTCAGTATGACTCCCTGCATCTGGTACCCCTCTTGAAACACAGTGGGC
50% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR GCA 90 bp GGTTCAAGTGATTCTCCTGTCTCCCAAGCAGCTGGAACTGCAGGCACATGCCACTTGAGATCATCTACTTaGATTCGTTTCCCAGGACAC +
Preference number: 4 (lower is better)
Translates to: GSSDSPVSQAAGTAGTCHLRSST*IRFPGH
Trigger: GTGTCCTGGGAAACGAATGCAAGTAGATGATCTCAA...GTGGCATGTGCCTGCAGTTCCAGCTGCTTGGGAGACAGGAGAATCACTTGAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400532.5
CDS-3UTR GCA 90 bp GTGCAAATCCTTGGGCATAAGACCCATCCCGCTTCCTCCTTTCTGTGGGTGTGTTCTATCCTCTTGGCATaGCAATGCAAGAGGAAAGCA +
Preference number: 4 (lower is better)
Translates to: VQILGHKTHPASSFLWVCSILLA*QCKRKA
Trigger: TGCTTTCCTCTTGCATTGGCATGCCAAGAGGATAGA...ACACACCCACAGAAAGGAGGAAGCGGGATGGGTCTTATGCCCAAGGATTTGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR CCA 90 bp AATACCAATTCCATTTCCTCGTGTACCTCTTTGCAAATGTCGGACAAAGCAGAGGGGCCCTTGAACTTCTaGGGCGGGAAAGGAGCAGAG +
Preference number: 4 (lower is better)
Translates to: NTNSISSCTSLQMSDKAEGPLNF*GGKGAE
Trigger: CTCTGCTCCTTTCCCGCCCCAGAAGTTCAAGGGCCC...CTCTGCTTTGTCCGACATTTGCAAAGAGGTACACGAGGAAATGGAATTGGTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR CCA 90 bp GGTTCAAGTGATTCTCCTGTCTCCCAAGCAGCTGGAACTGCAGGCACATGCCACTGTGTATTCAGGAGCTaGATTCCCTTCTTTGTCTTG +
Preference number: 4 (lower is better)
Translates to: GSSDSPVSQAAGTAGTCHCVFRS*IPFFVL
Trigger: CAAGACAAAGAAGGGAATCCAGCTCCTGAATACACA...GTGGCATGTGCCTGCAGTTCCAGCTGCTTGGGAGACAGGAGAATCACTTGAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400532.5
CDS-3UTR CCA 90 bp CCCCTAAATCAGACTCTCGTGCAGAGTCTGATTTATATTTTCATGACCTGTGGAGGAGCATCTTCCCGGTaGCCTGGTGTCCAGGCACAT +
Preference number: 4 (lower is better)
Translates to: PLNQTLVQSLIYIFMTCGGASSR*PGVQAH
Trigger: ATGTGCCTGGACACCAGGCCACCGGGAAGATGCTCC...TCCACAGGTCATGAAAATATAAATCAGACTCTGCACGAGAGTCTGATTTAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR CCA 90 bp GCCCACTGTGTTTCAAGAGGGGTACCAGATGCAGGGAGTCATACTGAGCTTTTTGGGAATCTATGCCTGTaGGCCAAATCTTGTCTGTGC +
Preference number: 4 (lower is better)
Translates to: AHCVSRGVPDAGSHTELFGNLCL*AKSCLC
Trigger: GCACAGACAAGATTTGGCCCACAGGCATAGATTCCC...AAAAAGCTCAGTATGACTCCCTGCATCTGGTACCCCTCTTGAAACACAGTGGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR CCA 90 bp GGTTCAAGTGATTCTCCTGTCTCCCAAGCAGCTGGAACTGCAGGCACATGCCACGCTAAAATAGCCTCTTaGTACTCTACTGCTGTGACT +
Preference number: 4 (lower is better)
Translates to: GSSDSPVSQAAGTAGTCHAKIAS*YSTAVT
Trigger: AGTCACAGCAGTAGAGTACCAAGAGGCTATTTTAGC...GTGGCATGTGCCTGCAGTTCCAGCTGCTTGGGAGACAGGAGAATCACTTGAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400532.5
CDS-3UTR CCA 90 bp CGGGTTCAAGTGATTCTCCTGTCTCCCAAGCAGCTGGAACTGCAGGCACATGCCTCTTCCACTCTAATCTaGAGGAAACAGTCTTCTTTG +
Preference number: 4 (lower is better)
Translates to: RVQVILLSPKQLELQAHASSTLI*RKQSSL
Trigger: CAAAGAAGACTGTTTCCTCCAGATTAGAGTGGAAGA...GGCATGTGCCTGCAGTTCCAGCTGCTTGGGAGACAGGAGAATCACTTGAACCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400532.5
CDS-3UTR TCA 90 bp GGTTCAAGTGATTCTCCTGTCTCCCAAGCAGCTGGAACTGCAGGCACATGCCACTGTCGTGGCTTTAGATaGAGAATTACTCTTCTGGAA +
Preference number: 4 (lower is better)
Translates to: GSSDSPVSQAAGTAGTCHCRGFR*RITLLE
Trigger: TTCCAGAAGAGTAATTCTTCATCTAAAGCCACGACA...GTGGCATGTGCCTGCAGTTCCAGCTGCTTGGGAGACAGGAGAATCACTTGAACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400532.5
CDS-3UTR TCA 90 bp GTGAAGTCACCACTCCTGCAGGGAAAGGTATCTGCAAACTTGTGTAGGCTCCAGAATCCATTTGTTCGGTaGATCCTGGGGATTTGCTTC +
Preference number: 4 (lower is better)
Translates to: VKSPLLQGKVSANLCRLQNPFVR*ILGICF
Trigger: GAAGCAAATCCCCAGGATTCACCGAACAAATGGATT...CTGGAGCCTACACAAGTTTGCAGATACCTTTCCCTGCAGGAGTGGTGACTTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR GCA 90 bp GTGCAAATCCTTGGGCATAAGACCCATCCCGCTTCCTCCTTTCTGTGGGTGTGTCACAACTACTACGGCTaGTATGATGCCACTTATGTT +
Preference number: 4 (lower is better)
Translates to: VQILGHKTHPASSFLWVCHNYYG*YDATYV
Trigger: AACATAAGTGGCATCATAGCAGCCGTAGTAGTTGTG...ACACACCCACAGAAAGGAGGAAGCGGGATGGGTCTTATGCCCAAGGATTTGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR GCA 90 bp CCCCTAAATCAGACTCTCGTGCAGAGTCTGATTTATATTTTCATGACCTGTGGAAGGCAAATCCTGTGGTaGACACCTGTGGGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: PLNQTLVQSLIYIFMTCGRQILW*TPVGSS
Trigger: GCTGGAGCCCACAGGTGTGCACCACAGGATTTGCCT...TCCACAGGTCATGAAAATATAAATCAGACTCTGCACGAGAGTCTGATTTAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR GCA 90 bp GTGAAGTCACCACTCCTGCAGGGAAAGGTATCTGCAAACTTGTGTAGGCTCCAGGGCCCGGAATGTCACTaGACAATTTTTAGAGACAGA +
Preference number: 4 (lower is better)
Translates to: VKSPLLQGKVSANLCRLQGPECH*TIFRDR
Trigger: TCTGTCTCTAAAAATTGTGCAGTGACATTCCGGGCC...CTGGAGCCTACACAAGTTTGCAGATACCTTTCCCTGCAGGAGTGGTGACTTCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR GCA 90 bp GCCCACTGTGTTTCAAGAGGGGTACCAGATGCAGGGAGTCATACTGAGCTTTTTCTCTTGGCATGCCAATaGAAGAGGAAAGCATTCCTC +
Preference number: 4 (lower is better)
Translates to: AHCVSRGVPDAGSHTELFLLACQ*KRKAFL
Trigger: GAGGAATGCTTTCCTCTTGCATTGGCATGCCAAGAG...AAAAAGCTCAGTATGACTCCCTGCATCTGGTACCCCTCTTGAAACACAGTGGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR GCA 90 bp GTGAAGTCACCACTCCTGCAGGGAAAGGTATCTGCAAACTTGTGTAGGCTCCAGTCTATCCTCTTGGCATaGCAATGCAAGAGGAAAGCA +
Preference number: 4 (lower is better)
Translates to: VKSPLLQGKVSANLCRLQSILLA*QCKRKA
Trigger: TGCTTTCCTCTTGCATTGGCATGCCAAGAGGATAGA...CTGGAGCCTACACAAGTTTGCAGATACCTTTCCCTGCAGGAGTGGTGACTTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR CCA 90 bp GAAATGAGACCAGAGGTTCCTTTTGCATCTGTCAGAGTATTTGTTGGACCCCCTTCCTCTTCCAGGTTTTaGCCTTGCTCAGATGGGGCA +
Preference number: 4 (lower is better)
Translates to: EMRPEVPFASVRVFVGPPSSSRF*PCSDGA
Trigger: TGCCCCATCTGAGCAAGGCCAAAACCTGGAAGAGGA...AGGGGGTCCAACAAATACTCTGACAGATGCAAAAGGAACCTCTGGTCTCATTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR CCA 90 bp GAAATGAGACCAGAGGTTCCTTTTGCATCTGTCAGAGTATTTGTTGGACCCCCTACAAGAAGGAAGCAGTaGCAAGCAGCAGTAGGGGTG +
Preference number: 4 (lower is better)
Translates to: EMRPEVPFASVRVFVGPPTRRKQ*QAAVGV
Trigger: CACCCCTACTGCTGCTTGCCACTGCTTCCTTCTTGT...AGGGGGTCCAACAAATACTCTGACAGATGCAAAAGGAACCTCTGGTCTCATTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR CCA 90 bp GTGAAGTCACCACTCCTGCAGGGAAAGGTATCTGCAAACTTGTGTAGGCTCCAGAGTCATCTATCCTCTTaGCATGCCAATGCAAGAGGA +
Preference number: 4 (lower is better)
Translates to: VKSPLLQGKVSANLCRLQSHLSS*HANARG
Trigger: TCCTCTTGCATTGGCATGCCAAGAGGATAGATGACT...CTGGAGCCTACACAAGTTTGCAGATACCTTTCCCTGCAGGAGTGGTGACTTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR TCA 90 bp CTCATTGTCGTGGCTTTAGATGAAGAATTACTCTTCGAGACTGAGAGACCAGGAAGAGGGTACTTCACATaGTGGAACTGCTGGAGCCAC +
Preference number: 4 (lower is better)
Translates to: LIVVALDEELLFETERPGRGYFT*WNCWSH
Trigger: GTGGCTCCAGCAGTTCCATCATGTGAAGTACCCTCT...TCCTGGTCTCTCAGTCTCGAAGAGTAATTCTTCATCTAAAGCCACGACAATGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460679.5
CDS-3UTR TCA 90 bp GTGAAGTCACCACTCCTGCAGGGAAAGGTATCTGCAAACTTGTGTAGGCTCCAGTGTATTCATTGTGTATaGGCTGTTGGTGCTTTGGGA +
Preference number: 4 (lower is better)
Translates to: VKSPLLQGKVSANLCRLQCIHCV*AVGALG
Trigger: TCCCAAAGCACCAACAGCTCATACACAATGAATACA...CTGGAGCCTACACAAGTTTGCAGATACCTTTCCCTGCAGGAGTGGTGACTTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR TCA 90 bp AATACCAATTCCATTTCCTCGTGTACCTCTTTGCAAATGTCGGACAAAGCAGAGAGAATTGTCAACCCCTaGCTAAGGGACTTGGCCCGG +
Preference number: 4 (lower is better)
Translates to: NTNSISSCTSLQMSDKAERIVNP*LRDLAR
Trigger: CCGGGCCAAGTCCCTTAGTCAGGGGTTGACAATTCT...CTCTGCTTTGTCCGACATTTGCAAAGAGGTACACGAGGAAATGGAATTGGTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR TCA 90 bp GAAATGAGACCAGAGGTTCCTTTTGCATCTGTCAGAGTATTTGTTGGACCCCCTGATCCACTTTTCGTTTaGGCCATTGCTCATGTGCCC +
Preference number: 4 (lower is better)
Translates to: EMRPEVPFASVRVFVGPPDPLFV*AIAHVP
Trigger: GGGCACATGAGCAATGGCTCAAACGAAAAGTGGATC...AGGGGGTCCAACAAATACTCTGACAGATGCAAAAGGAACCTCTGGTCTCATTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR TCA 90 bp GTGACCTTTTCATCCACATTTGCCCAGAAGAATAGGACATGCCCTAGCCATATTTTGAGGTCAGAGGTTTaGGACCAGCCTGGCCAACAT +
Preference number: 4 (lower is better)
Translates to: VTFSSTFAQKNRTCPSHILRSEV*DQPGQH
Trigger: ATGTTGGCCAGGCTGGTCTCAAACCTCTGACCTCAA...AATATGGCTAGGGCATGTCCTATTCTTCTGGGCAAATGTGGATGAAAAGGTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR GCA 90 bp GCCCACTGTGTTTCAAGAGGGGTACCAGATGCAGGGAGTCATACTGAGCTTTTTTTTCGTTTGAGCCATTaGTCATGTGCCCACTGTGTT +
Preference number: 4 (lower is better)
Translates to: AHCVSRGVPDAGSHTELFFRLSH*SCAHCV
Trigger: AACACAGTGGGCACATGAGCAATGGCTCAAACGAAA...AAAAAGCTCAGTATGACTCCCTGCATCTGGTACCCCTCTTGAAACACAGTGGGC
48% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR CCA 90 bp GTTGGACCCCCTAAATCAGACTCTCGTGCAGAGTCTGATTTATATTTTCATGACAGGGACGGCTCTAGATaGGATGTCAGTTTCCCCCTC +
Preference number: 4 (lower is better)
Translates to: VGPPKSDSRAESDLYFHDRDGSR*DVSFPL
Trigger: GAGGGGGAAACTGACATCCCATCTAGAGCCGTCCCT...GTCATGAAAATATAAATCAGACTCTGCACGAGAGTCTGATTTAGGGGGTCCAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR CCA 90 bp CGGGTTCAAGTGATTCTCCTGTCTCCCAAGCAGCTGGAACTGCAGGCACATGCCGAAGAATTACTCTTCTaGAAGGAGGTTTCTTTTGAA +
Preference number: 4 (lower is better)
Translates to: RVQVILLSPKQLELQAHAEELLF*KEVSFE
Trigger: TTCAAAAGAAACCTCCTTCCAGAAGAGTAATTCTTC...GGCATGTGCCTGCAGTTCCAGCTGCTTGGGAGACAGGAGAATCACTTGAACCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400532.5
CDS-3UTR CCA 90 bp GTTGGACCCCCTAAATCAGACTCTCGTGCAGAGTCTGATTTATATTTTCATGACTGTGGTGCACACCTGTaGGCTCCAGCCATTAGGCAT +
Preference number: 4 (lower is better)
Translates to: VGPPKSDSRAESDLYFHDCGAHL*APAIRH
Trigger: ATGCCTAATGGCTGGAGCCCACAGGTGTGCACCACA...GTCATGAAAATATAAATCAGACTCTGCACGAGAGTCTGATTTAGGGGGTCCAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR CCA 90 bp AATACCAATTCCATTTCCTCGTGTACCTCTTTGCAAATGTCGGACAAAGCAGAGTGTGGTGCACACCTGTaGGCTCCAGCCATTAGGCAT +
Preference number: 4 (lower is better)
Translates to: NTNSISSCTSLQMSDKAECGAHL*APAIRH
Trigger: ATGCCTAATGGCTGGAGCCCACAGGTGTGCACCACA...CTCTGCTTTGTCCGACATTTGCAAAGAGGTACACGAGGAAATGGAATTGGTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR TCA 90 bp AATACCAATTCCATTTCCTCGTGTACCTCTTTGCAAATGTCGGACAAAGCAGAGAGAGGGTACTTCACATaGTGGAACTGCTGGAGCCAC +
Preference number: 4 (lower is better)
Translates to: NTNSISSCTSLQMSDKAERGYFT*WNCWSH
Trigger: GTGGCTCCAGCAGTTCCATCATGTGAAGTACCCTCT...CTCTGCTTTGTCCGACATTTGCAAAGAGGTACACGAGGAAATGGAATTGGTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR TCA 90 bp GCCCACTGTGTTTCAAGAGGGGTACCAGATGCAGGGAGTCATACTGAGCTTTTTTGTATTCATTGTGTATaGGCTGTTGGTGCTTTGGGA +
Preference number: 4 (lower is better)
Translates to: AHCVSRGVPDAGSHTELFCIHCV*AVGALG
Trigger: TCCCAAAGCACCAACAGCTCATACACAATGAATACA...AAAAAGCTCAGTATGACTCCCTGCATCTGGTACCCCTCTTGAAACACAGTGGGC
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR TCA 90 bp GCCCACTGTGTTTCAAGAGGGGTACCAGATGCAGGGAGTCATACTGAGCTTTTTGAAGGAGGTTTCTTTTaGAAAGTAGCCTTTCCTCTG +
Preference number: 4 (lower is better)
Translates to: AHCVSRGVPDAGSHTELFEGGFF*KVAFPL
Trigger: CAGAGGAAAGGCTACTTTTCAAAAGAAACCTCCTTC...AAAAAGCTCAGTATGACTCCCTGCATCTGGTACCCCTCTTGAAACACAGTGGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR TCA 90 bp GCCCACTGTGTTTCAAGAGGGGTACCAGATGCAGGGAGTCATACTGAGCTTTTTGTCAAAGGTAGCAAGTaGCCTTTTCATCCACATTTG +
Preference number: 4 (lower is better)
Translates to: AHCVSRGVPDAGSHTELFVKGSK*PFHPHL
Trigger: CAAATGTGGATGAAAAGGTCACTTGCTACCTTTGAC...AAAAAGCTCAGTATGACTCCCTGCATCTGGTACCCCTCTTGAAACACAGTGGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR TCA 90 bp AATACCAATTCCATTTCCTCGTGTACCTCTTTGCAAATGTCGGACAAAGCAGAGTTGAGGTCAGAGGTTTaGGACCAGCCTGGCCAACAT +
Preference number: 4 (lower is better)
Translates to: NTNSISSCTSLQMSDKAELRSEV*DQPGQH
Trigger: ATGTTGGCCAGGCTGGTCTCAAACCTCTGACCTCAA...CTCTGCTTTGTCCGACATTTGCAAAGAGGTACACGAGGAAATGGAATTGGTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR TCA 90 bp GTGAAGTCACCACTCCTGCAGGGAAAGGTATCTGCAAACTTGTGTAGGCTCCAGATTGGAACACAGACATaGCTACTTGCTTGTTTTGTC +
Preference number: 4 (lower is better)
Translates to: VKSPLLQGKVSANLCRLQIGTQT*LLACFV
Trigger: GACAAAACAAGCAAGTAGTCATGTCTGTGTTCCAAT...CTGGAGCCTACACAAGTTTGCAGATACCTTTCCCTGCAGGAGTGGTGACTTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR TCA 90 bp GAAATGAGACCAGAGGTTCCTTTTGCATCTGTCAGAGTATTTGTTGGACCCCCTGATGACAGGTATGTCTaGAGAGGCGTCTTTCAGAGT +
Preference number: 4 (lower is better)
Translates to: EMRPEVPFASVRVFVGPPDDRYV*RGVFQS
Trigger: ACTCTGAAAGACGCCTCTTCAGACATACCTGTCATC...AGGGGGTCCAACAAATACTCTGACAGATGCAAAAGGAACCTCTGGTCTCATTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR TCA 90 bp GCCCACTGTGTTTCAAGAGGGGTACCAGATGCAGGGAGTCATACTGAGCTTTTTAAGTCTGGACACCAGTaGCCCACAGATACATATATA +
Preference number: 4 (lower is better)
Translates to: AHCVSRGVPDAGSHTELFKSGHQ*PTDTYI
Trigger: TATATATGTATCTGTGGGTCACTGGTGTCCAGACTT...AAAAAGCTCAGTATGACTCCCTGCATCTGGTACCCCTCTTGAAACACAGTGGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR GCA 90 bp GTGACCTTTTCATCCACATTTGCCCAGAAGAATAGGACATGCCCTAGCCATATTTGTATGAGCTGTTGGTaGTTTGGGAGCCAAGTCTGG +
Preference number: 4 (lower is better)
Translates to: VTFSSTFAQKNRTCPSHICMSCW*FGSQVW
Trigger: CCAGACTTGGCTCCCAAAGCACCAACAGCTCATACA...AATATGGCTAGGGCATGTCCTATTCTTCTGGGCAAATGTGGATGAAAAGGTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR GCA 90 bp GAAATGAGACCAGAGGTTCCTTTTGCATCTGTCAGAGTATTTGTTGGACCCCCTGTTTCCCAGGACACCTaGGATATCCAACAGAATTGC +
Preference number: 4 (lower is better)
Translates to: EMRPEVPFASVRVFVGPPVSQDT*DIQQNC
Trigger: GCAATTCTGTTGGATATCGCAGGTGTCCTGGGAAAC...AGGGGGTCCAACAAATACTCTGACAGATGCAAAAGGAACCTCTGGTCTCATTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR GCA 90 bp GCCCACTGTGTTTCAAGAGGGGTACCAGATGCAGGGAGTCATACTGAGCTTTTTACAGACATGACTACTTaGTTGTTTTGTCTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: AHCVSRGVPDAGSHTELFTDMTT*LFCLWL
Trigger: CAGCCACAGACAAAACAAGCAAGTAGTCATGTCTGT...AAAAAGCTCAGTATGACTCCCTGCATCTGGTACCCCTCTTGAAACACAGTGGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR CCA 90 bp GCCCACTGTGTTTCAAGAGGGGTACCAGATGCAGGGAGTCATACTGAGCTTTTTTGTGTATTCAGGAGCTaGATTCCCTTCTTTGTCTTG +
Preference number: 4 (lower is better)
Translates to: AHCVSRGVPDAGSHTELFCVFRS*IPFFVL
Trigger: CAAGACAAAGAAGGGAATCCAGCTCCTGAATACACA...AAAAAGCTCAGTATGACTCCCTGCATCTGGTACCCCTCTTGAAACACAGTGGGC
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR CCA 90 bp GCCCACTGTGTTTCAAGAGGGGTACCAGATGCAGGGAGTCATACTGAGCTTTTTCTAGAAGTTAGGACGTaGTTAACATTTCCCAAAGCC +
Preference number: 4 (lower is better)
Translates to: AHCVSRGVPDAGSHTELFLEVRT*LTFPKA
Trigger: GGCTTTGGGAAATGTTAACCACGTCCTAACTTCTAG...AAAAAGCTCAGTATGACTCCCTGCATCTGGTACCCCTCTTGAAACACAGTGGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR CCA 90 bp GTGCAAATCCTTGGGCATAAGACCCATCCCGCTTCCTCCTTTCTGTGGGTGTGTCATTGTAATAGTAGCTaGAAGCTTTTGTGGTTCATC +
Preference number: 4 (lower is better)
Translates to: VQILGHKTHPASSFLWVCHCNSS*KLLWFI
Trigger: GATGAACCACAAAAGCTTCCAGCTACTATTACAATG...ACACACCCACAGAAAGGAGGAAGCGGGATGGGTCTTATGCCCAAGGATTTGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR CCA 90 bp GTGACCTTTTCATCCACATTTGCCCAGAAGAATAGGACATGCCCTAGCCATATTGGGAATCTATGCCTGTaGGCCAAATCTTGTCTGTGC +
Preference number: 4 (lower is better)
Translates to: VTFSSTFAQKNRTCPSHIGNLCL*AKSCLC
Trigger: GCACAGACAAGATTTGGCCCACAGGCATAGATTCCC...AATATGGCTAGGGCATGTCCTATTCTTCTGGGCAAATGTGGATGAAAAGGTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
3UTR CAA 72 bp TTCCCAGGAATGGAAGTAAACACAAAGTGCAAATCCTaGGGCATAAGACCCATCCCGCTTCCTCCTTTCTGT +
Preference number: 4 (lower is better)
Translates to: FPGMEVNTKCKS*GIRPIPLPPFC
Trigger: ACAGAAAGGAGGAAGCGGGATGGGTCTTATGCCCAAGGATTTGCACTTTGTGTTTACTTCCATTCCTGGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR TCA 90 bp GAAATGAGACCAGAGGTTCCTTTTGCATCTGTCAGAGTATTTGTTGGACCCCCTCTAATACTTCCAGAGTaGCTGTATCCTCTTCCAGGT +
Preference number: 4 (lower is better)
Translates to: EMRPEVPFASVRVFVGPPLILPE*LYPLPG
Trigger: ACCTGGAAGAGGATACAGTCACTCTGGAAGTATTAG...AGGGGGTCCAACAAATACTCTGACAGATGCAAAAGGAACCTCTGGTCTCATTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR TCA 90 bp GTGACCTTTTCATCCACATTTGCCCAGAAGAATAGGACATGCCCTAGCCATATTTGTAGGCTCCAGTGGTaGGTTCTGATGTCAAAGTCA +
Preference number: 4 (lower is better)
Translates to: VTFSSTFAQKNRTCPSHICRLQW*VLMSKS
Trigger: TGACTTTGACATCAGAACTCACCACTGGAGCCTACA...AATATGGCTAGGGCATGTCCTATTCTTCTGGGCAAATGTGGATGAAAAGGTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR TCA 90 bp CCCCTAAATCAGACTCTCGTGCAGAGTCTGATTTATATTTTCATGACCTGTGGAGATCCACTTTTCGTTTaGGCCATTGCTCATGTGCCC +
Preference number: 4 (lower is better)
Translates to: PLNQTLVQSLIYIFMTCGDPLFV*AIAHVP
Trigger: GGGCACATGAGCAATGGCTCAAACGAAAAGTGGATC...TCCACAGGTCATGAAAATATAAATCAGACTCTGCACGAGAGTCTGATTTAGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR TCA 90 bp GAAATGAGACCAGAGGTTCCTTTTGCATCTGTCAGAGTATTTGTTGGACCCCCTTTGTGGTTCATCGGTTaGGAAACCCACATTAGATCC +
Preference number: 4 (lower is better)
Translates to: EMRPEVPFASVRVFVGPPLWFIG*ETHIRS
Trigger: GGATCTAATGTGGGTTTCTCAACCGATGAACCACAA...AGGGGGTCCAACAAATACTCTGACAGATGCAAAAGGAACCTCTGGTCTCATTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR TCA 90 bp GTGACCTTTTCATCCACATTTGCCCAGAAGAATAGGACATGCCCTAGCCATATTTGTACTTCACCACCATaGGTTGGGAATCTATGCCTG +
Preference number: 4 (lower is better)
Translates to: VTFSSTFAQKNRTCPSHICTSPP*VGNLCL
Trigger: CAGGCATAGATTCCCAACTCATGGTGGTGAAGTACA...AATATGGCTAGGGCATGTCCTATTCTTCTGGGCAAATGTGGATGAAAAGGTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR GCA 90 bp TCTGGGAACAGGAAGTCAATGGCAGATGATTCTTCAAAGGAATTAGGAGATGACTCCAGGTTTTGGCCTTaGTCAGATGGGGCACTAACT +
Preference number: 4 (lower is better)
Translates to: SGNRKSMADDSSKELGDDSRFWP*SDGALT
Trigger: AGTTAGTGCCCCATCTGAGCAAGGCCAAAACCTGGA...GTCATCTCCTAATTCCTTTGAAGAATCATCTGCCATTGACTTCCTGTTCCCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460679.5
CDS-3UTR GCA 90 bp GTGACCTTTTCATCCACATTTGCCCAGAAGAATAGGACATGCCCTAGCCATATTGTTTCCCAGGACACCTaGGATATCCAACAGAATTGC +
Preference number: 4 (lower is better)
Translates to: VTFSSTFAQKNRTCPSHIVSQDT*DIQQNC
Trigger: GCAATTCTGTTGGATATCGCAGGTGTCCTGGGAAAC...AATATGGCTAGGGCATGTCCTATTCTTCTGGGCAAATGTGGATGAAAAGGTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR GCA 90 bp GTTGGACCCCCTAAATCAGACTCTCGTGCAGAGTCTGATTTATATTTTCATGACGAGCCATTGCTCATGTaGCCACTGTGTTTCAAGAGG +
Preference number: 4 (lower is better)
Translates to: VGPPKSDSRAESDLYFHDEPLLM*PLCFKR
Trigger: CCTCTTGAAACACAGTGGGCACATGAGCAATGGCTC...GTCATGAAAATATAAATCAGACTCTGCACGAGAGTCTGATTTAGGGGGTCCAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR CCA 90 bp AGGAAAGCATTCCTCAAACCAAAGAAATCTTCCAACCAAAACATAGGTAACATTGGGCCCTTGAACTTCTaGGGCGGGAAAGGAGCAGAG +
Preference number: 4 (lower is better)
Translates to: RKAFLKPKKSSNQNIGNIGPLNF*GGKGAE
Trigger: CTCTGCTCCTTTCCCGCCCCAGAAGTTCAAGGGCCC...AATGTTACCTATGTTTTGGTTGGAAGATTTCTTTGGTTTGAGGAATGCTTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR CCA 90 bp AATACCAATTCCATTTCCTCGTGTACCTCTTTGCAAATGTCGGACAAAGCAGAGTTGGCCTTGCTCAGATaGGGCACTAACTTCACAACG +
Preference number: 4 (lower is better)
Translates to: NTNSISSCTSLQMSDKAELALLR*GTNFTT
Trigger: CGTTGTGAAGTTAGTGCCCCATCTGAGCAAGGCCAA...CTCTGCTTTGTCCGACATTTGCAAAGAGGTACACGAGGAAATGGAATTGGTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR CCA 90 bp AACACAGACATGACTACTTGCTTGTTTTGTCTGTGGCTGCCTTTGTGCTACAATTTGGCCTTGCTCAGATaGGGCACTAACTTCACAACG +
Preference number: 4 (lower is better)
Translates to: NTDMTTCLFCLWLPLCYNLALLR*GTNFTT
Trigger: CGTTGTGAAGTTAGTGCCCCATCTGAGCAAGGCCAA...ATTGTAGCACAAAGGCAGCCACAGACAAAACAAGCAAGTAGTCATGTCTGTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR CCA 90 bp GTGAAGTCACCACTCCTGCAGGGAAAGGTATCTGCAAACTTGTGTAGGCTCCAGCATTGTAATAGTAGCTaGAAGCTTTTGTGGTTCATC +
Preference number: 4 (lower is better)
Translates to: VKSPLLQGKVSANLCRLQHCNSS*KLLWFI
Trigger: GATGAACCACAAAAGCTTCCAGCTACTATTACAATG...CTGGAGCCTACACAAGTTTGCAGATACCTTTCCCTGCAGGAGTGGTGACTTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
3UTR CAA 72 bp TGTCTGAAGAGGCGTCTTTCAGAGTCATCTATCCTCTaGGCATGCCAATGCAAGAGGAAAGCATTCCTCAAA +
Preference number: 4 (lower is better)
Translates to: CLKRRLSESSIL*ACQCKRKAFLK
Trigger: TTTGAGGAATGCTTTCCTCTTGCATTGGCATGCCAAGAGGATAGATGACTCTGAAAGACGCCTCTTCAGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR TCA 90 bp GTGACCTTTTCATCCACATTTGCCCAGAAGAATAGGACATGCCCTAGCCATATTCTAATACTTCCAGAGTaGCTGTATCCTCTTCCAGGT +
Preference number: 4 (lower is better)
Translates to: VTFSSTFAQKNRTCPSHILILPE*LYPLPG
Trigger: ACCTGGAAGAGGATACAGTCACTCTGGAAGTATTAG...AATATGGCTAGGGCATGTCCTATTCTTCTGGGCAAATGTGGATGAAAAGGTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR TCA 90 bp CCCCTAAATCAGACTCTCGTGCAGAGTCTGATTTATATTTTCATGACCTGTGGATGTAGGCTCCAGTGGTaGGTTCTGATGTCAAAGTCA +
Preference number: 4 (lower is better)
Translates to: PLNQTLVQSLIYIFMTCGCRLQW*VLMSKS
Trigger: TGACTTTGACATCAGAACTCACCACTGGAGCCTACA...TCCACAGGTCATGAAAATATAAATCAGACTCTGCACGAGAGTCTGATTTAGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR TCA 90 bp GTTGGACCCCCTAAATCAGACTCTCGTGCAGAGTCTGATTTATATTTTCATGACGATGACAGGTATGTCTaGAGAGGCGTCTTTCAGAGT +
Preference number: 4 (lower is better)
Translates to: VGPPKSDSRAESDLYFHDDDRYV*RGVFQS
Trigger: ACTCTGAAAGACGCCTCTTCAGACATACCTGTCATC...GTCATGAAAATATAAATCAGACTCTGCACGAGAGTCTGATTTAGGGGGTCCAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR TCA 90 bp TTAGATGAAGAATTACTCTTCGAGACTGAGAGACCAGGATTGAGCCAGAAATCTCTGAGAGACCAGGATTaGGCCAGAAATCTGGGAACA +
Preference number: 4 (lower is better)
Translates to: LDEELLFETERPGLSQKSLRDQD*ARNLGT
Trigger: TGTTCCCAGATTTCTGGCTCAATCCTGGTCTCTCAG...AGATTTCTGGCTCAATCCTGGTCTCTCAGTCTCGAAGAGTAATTCTTCATCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460679.5
CDS-3UTR GCA 90 bp GTGACCTTTTCATCCACATTTGCCCAGAAGAATAGGACATGCCCTAGCCATATTACCTTGGTACTCTACTaGTGTGACTACTTGTTGGTC +
Preference number: 4 (lower is better)
Translates to: VTFSSTFAQKNRTCPSHITLVLY*CDYLLV
Trigger: GACCAACAAGTAGTCACAGCAGTAGAGTACCAAGGT...AATATGGCTAGGGCATGTCCTATTCTTCTGGGCAAATGTGGATGAAAAGGTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312957.9
CDS-3UTR GCA 90 bp ATGGCAGATGATTCTTCAAAGGAATTAGGAGATGACAAACTGTCTGAAGCCATGTGTATGAGCTGTTGGTaGTTTGGGAGCCAAGTCTGG +
Preference number: 4 (lower is better)
Translates to: MADDSSKELGDDKLSEAMCMSCW*FGSQVW
Trigger: CCAGACTTGGCTCCCAAAGCACCAACAGCTCATACA...CATGGCTTCAGACAGTTTGTCATCTCCTAATTCCTTTGAAGAATCATCTGCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460679.5
CDS-3UTR GCA 90 bp AACACAGACATGACTACTTGCTTGTTTTGTCTGTGGCTGCCTTTGTGCTACAATCCTCGTGTACCTCTTTaGAAATGTCGGACAAAGCAG +
Preference number: 4 (lower is better)
Translates to: NTDMTTCLFCLWLPLCYNPRVPL*KCRTKQ
Trigger: CTGCTTTGTCCGACATTTGCAAAGAGGTACACGAGG...ATTGTAGCACAAAGGCAGCCACAGACAAAACAAGCAAGTAGTCATGTCTGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR GCA 90 bp GTGACCTTTTCATCCACATTTGCCCAGAAGAATAGGACATGCCCTAGCCATATTGGCCCGGAATGTCACTaGACAATTTTTAGAGACAGA +
Preference number: 4 (lower is better)
Translates to: VTFSSTFAQKNRTCPSHIGPECH*TIFRDR
Trigger: TCTGTCTCTAAAAATTGTGCAGTGACATTCCGGGCC...AATATGGCTAGGGCATGTCCTATTCTTCTGGGCAAATGTGGATGAAAAGGTCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR GCA 90 bp GTGACCTTTTCATCCACATTTGCCCAGAAGAATAGGACATGCCCTAGCCATATTTGTTTTGTCTGTGGCTaGCTTTGTGCTACAATGGCA +
Preference number: 4 (lower is better)
Translates to: VTFSSTFAQKNRTCPSHICFVCG*LCATMA
Trigger: TGCCATTGTAGCACAAAGGCAGCCACAGACAAAACA...AATATGGCTAGGGCATGTCCTATTCTTCTGGGCAAATGTGGATGAAAAGGTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR GCA 90 bp AATACCAATTCCATTTCCTCGTGTACCTCTTTGCAAATGTCGGACAAAGCAGAGCTCTTGGCATGCCAATaGAAGAGGAAAGCATTCCTC +
Preference number: 4 (lower is better)
Translates to: NTNSISSCTSLQMSDKAELLACQ*KRKAFL
Trigger: GAGGAATGCTTTCCTCTTGCATTGGCATGCCAAGAG...CTCTGCTTTGTCCGACATTTGCAAAGAGGTACACGAGGAAATGGAATTGGTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR CCA 90 bp GTGACCTTTTCATCCACATTTGCCCAGAAGAATAGGACATGCCCTAGCCATATTTACTTGTTGGTCTTTTaGGGCAGAAAACCCATAGGC +
Preference number: 4 (lower is better)
Translates to: VTFSSTFAQKNRTCPSHIYLLVF*GRKPIG
Trigger: GCCTATGGGTTTTCTGCCCCAAAAGACCAACAAGTA...AATATGGCTAGGGCATGTCCTATTCTTCTGGGCAAATGTGGATGAAAAGGTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR CCA 90 bp GTGACCTTTTCATCCACATTTGCCCAGAAGAATAGGACATGCCCTAGCCATATTTTGTTCGGTGAATCCTaGGGATTTGCTTCGCCAATT +
Preference number: 4 (lower is better)
Translates to: VTFSSTFAQKNRTCPSHILFGES*GFASPI
Trigger: AATTGGCGAAGCAAATCCCCAGGATTCACCGAACAA...AATATGGCTAGGGCATGTCCTATTCTTCTGGGCAAATGTGGATGAAAAGGTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR CCA 90 bp GAAATGAGACCAGAGGTTCCTTTTGCATCTGTCAGAGTATTTGTTGGACCCCCTTGCTTGTTTTGTCTGTaGCTGCCTTTGTGCTACAAT +
Preference number: 4 (lower is better)
Translates to: EMRPEVPFASVRVFVGPPCLFCL*LPLCYN
Trigger: ATTGTAGCACAAAGGCAGCCACAGACAAAACAAGCA...AGGGGGTCCAACAAATACTCTGACAGATGCAAAAGGAACCTCTGGTCTCATTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR TCA 90 bp CCCCTAAATCAGACTCTCGTGCAGAGTCTGATTTATATTTTCATGACCTGTGGAGGTACTCTACTGCTGTaGCTACTTGTTGGTCTTTTG +
Preference number: 4 (lower is better)
Translates to: PLNQTLVQSLIYIFMTCGGTLLL*LLVGLL
Trigger: CAAAAGACCAACAAGTAGTCACAGCAGTAGAGTACC...TCCACAGGTCATGAAAATATAAATCAGACTCTGCACGAGAGTCTGATTTAGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR TCA 90 bp TCTGGGAACAGGAAGTCAATGGCAGATGATTCTTCAAAGGAATTAGGAGATGACCTAATACTTCCAGAGTaGCTGTATCCTCTTCCAGGT +
Preference number: 4 (lower is better)
Translates to: SGNRKSMADDSSKELGDDLILPE*LYPLPG
Trigger: ACCTGGAAGAGGATACAGTCACTCTGGAAGTATTAG...GTCATCTCCTAATTCCTTTGAAGAATCATCTGCCATTGACTTCCTGTTCCCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460679.5
CDS-3UTR TCA 90 bp CCCCTAAATCAGACTCTCGTGCAGAGTCTGATTTATATTTTCATGACCTGTGGATTCCCTTCTTTGTCTTaGCATCGTAGCTCTACCACA +
Preference number: 4 (lower is better)
Translates to: PLNQTLVQSLIYIFMTCGFPSLS*HRSSTT
Trigger: TGTGGTAGAGCTACGATGTCAAGACAAAGAAGGGAA...TCCACAGGTCATGAAAATATAAATCAGACTCTGCACGAGAGTCTGATTTAGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR TCA 90 bp AATACCAATTCCATTTCCTCGTGTACCTCTTTGCAAATGTCGGACAAAGCAGAGTTGTGGTTCATCGGTTaGGAAACCCACATTAGATCC +
Preference number: 4 (lower is better)
Translates to: NTNSISSCTSLQMSDKAELWFIG*ETHIRS
Trigger: GGATCTAATGTGGGTTTCTCAACCGATGAACCACAA...CTCTGCTTTGTCCGACATTTGCAAAGAGGTACACGAGGAAATGGAATTGGTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR TCA 90 bp GAAATGAGACCAGAGGTTCCTTTTGCATCTGTCAGAGTATTTGTTGGACCCCCTATTGGAACACAGACATaGCTACTTGCTTGTTTTGTC +
Preference number: 4 (lower is better)
Translates to: EMRPEVPFASVRVFVGPPIGTQT*LLACFV
Trigger: GACAAAACAAGCAAGTAGTCATGTCTGTGTTCCAAT...AGGGGGTCCAACAAATACTCTGACAGATGCAAAAGGAACCTCTGGTCTCATTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR TCA 90 bp GTGACCTTTTCATCCACATTTGCCCAGAAGAATAGGACATGCCCTAGCCATATTAAGTCTGGACACCAGTaGCCCACAGATACATATATA +
Preference number: 4 (lower is better)
Translates to: VTFSSTFAQKNRTCPSHIKSGHQ*PTDTYI
Trigger: TATATATGTATCTGTGGGTCACTGGTGTCCAGACTT...AATATGGCTAGGGCATGTCCTATTCTTCTGGGCAAATGTGGATGAAAAGGTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR TCA 90 bp ATGGCAGATGATTCTTCAAAGGAATTAGGAGATGACAAACTGTCTGAAGCCATGATTACTCTTCGAGACTaGGAGACCAGGATTGAGCCA +
Preference number: 4 (lower is better)
Translates to: MADDSSKELGDDKLSEAMITLRD*ETRIEP
Trigger: TGGCTCAATCCTGGTCTCTCAGTCTCGAAGAGTAAT...CATGGCTTCAGACAGTTTGTCATCTCCTAATTCCTTTGAAGAATCATCTGCCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460679.5
CDS-3UTR GCA 90 bp CCCCTAAATCAGACTCTCGTGCAGAGTCTGATTTATATTTTCATGACCTGTGGATTTCGTTTGAGCCATTaGTCATGTGCCCACTGTGTT +
Preference number: 4 (lower is better)
Translates to: PLNQTLVQSLIYIFMTCGFRLSH*SCAHCV
Trigger: AACACAGTGGGCACATGAGCAATGGCTCAAACGAAA...TCCACAGGTCATGAAAATATAAATCAGACTCTGCACGAGAGTCTGATTTAGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR GCA 90 bp CCCCTAAATCAGACTCTCGTGCAGAGTCTGATTTATATTTTCATGACCTGTGGATGTTTTGTCTGTGGCTaGCTTTGTGCTACAATGGCA +
Preference number: 4 (lower is better)
Translates to: PLNQTLVQSLIYIFMTCGCFVCG*LCATMA
Trigger: TGCCATTGTAGCACAAAGGCAGCCACAGACAAAACA...TCCACAGGTCATGAAAATATAAATCAGACTCTGCACGAGAGTCTGATTTAGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR CCA 90 bp AGGAAAGCATTCCTCAAACCAAAGAAATCTTCCAACCAAAACATAGGTAACATTAGGGACGGCTCTAGATaGGATGTCAGTTTCCCCCTC +
Preference number: 4 (lower is better)
Translates to: RKAFLKPKKSSNQNIGNIRDGSR*DVSFPL
Trigger: GAGGGGGAAACTGACATCCCATCTAGAGCCGTCCCT...AATGTTACCTATGTTTTGGTTGGAAGATTTCTTTGGTTTGAGGAATGCTTTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR CCA 90 bp CCCCTAAATCAGACTCTCGTGCAGAGTCTGATTTATATTTTCATGACCTGTGGATACTTGTTGGTCTTTTaGGGCAGAAAACCCATAGGC +
Preference number: 4 (lower is better)
Translates to: PLNQTLVQSLIYIFMTCGYLLVF*GRKPIG
Trigger: GCCTATGGGTTTTCTGCCCCAAAAGACCAACAAGTA...TCCACAGGTCATGAAAATATAAATCAGACTCTGCACGAGAGTCTGATTTAGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR CCA 90 bp GTGACCTTTTCATCCACATTTGCCCAGAAGAATAGGACATGCCCTAGCCATATTTGTGTATTCAGGAGCTaGATTCCCTTCTTTGTCTTG +
Preference number: 4 (lower is better)
Translates to: VTFSSTFAQKNRTCPSHICVFRS*IPFFVL
Trigger: CAAGACAAAGAAGGGAATCCAGCTCCTGAATACACA...AATATGGCTAGGGCATGTCCTATTCTTCTGGGCAAATGTGGATGAAAAGGTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR CCA 90 bp GTGACCTTTTCATCCACATTTGCCCAGAAGAATAGGACATGCCCTAGCCATATTCTAGAAGTTAGGACGTaGTTAACATTTCCCAAAGCC +
Preference number: 4 (lower is better)
Translates to: VTFSSTFAQKNRTCPSHILEVRT*LTFPKA
Trigger: GGCTTTGGGAAATGTTAACCACGTCCTAACTTCTAG...AATATGGCTAGGGCATGTCCTATTCTTCTGGGCAAATGTGGATGAAAAGGTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR CCA 90 bp CCCCTAAATCAGACTCTCGTGCAGAGTCTGATTTATATTTTCATGACCTGTGGATTGTTCGGTGAATCCTaGGGATTTGCTTCGCCAATT +
Preference number: 4 (lower is better)
Translates to: PLNQTLVQSLIYIFMTCGLFGES*GFASPI
Trigger: AATTGGCGAAGCAAATCCCCAGGATTCACCGAACAA...TCCACAGGTCATGAAAATATAAATCAGACTCTGCACGAGAGTCTGATTTAGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR CCA 90 bp CCCCTAAATCAGACTCTCGTGCAGAGTCTGATTTATATTTTCATGACCTGTGGAAGTCATCTATCCTCTTaGCATGCCAATGCAAGAGGA +
Preference number: 4 (lower is better)
Translates to: PLNQTLVQSLIYIFMTCGSHLSS*HANARG
Trigger: TCCTCTTGCATTGGCATGCCAAGAGGATAGATGACT...TCCACAGGTCATGAAAATATAAATCAGACTCTGCACGAGAGTCTGATTTAGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR CCA 90 bp GTTGGACCCCCTAAATCAGACTCTCGTGCAGAGTCTGATTTATATTTTCATGACATGCAAATACAAGTCTaGACACCAGTGACCCACAGA +
Preference number: 4 (lower is better)
Translates to: VGPPKSDSRAESDLYFHDMQIQV*TPVTHR
Trigger: TCTGTGGGTCACTGGTGTCCAGACTTGTATTTGCAT...GTCATGAAAATATAAATCAGACTCTGCACGAGAGTCTGATTTAGGGGGTCCAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR CCA 90 bp CCCCTAAATCAGACTCTCGTGCAGAGTCTGATTTATATTTTCATGACCTGTGGAATGCAAATACAAGTCTaGACACCAGTGACCCACAGA +
Preference number: 4 (lower is better)
Translates to: PLNQTLVQSLIYIFMTCGMQIQV*TPVTHR
Trigger: TCTGTGGGTCACTGGTGTCCAGACTTGTATTTGCAT...TCCACAGGTCATGAAAATATAAATCAGACTCTGCACGAGAGTCTGATTTAGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR CCA 90 bp CTCATTGTCGTGGCTTTAGATGAAGAATTACTCTTCGAGACTGAGAGACCAGGAGGAACAGGAAGTCAATaGCAGATGATTCTTCAAAGG +
Preference number: 4 (lower is better)
Translates to: LIVVALDEELLFETERPGGTGSQ*QMILQR
Trigger: CCTTTGAAGAATCATCTGCCATTGACTTCCTGTTCC...TCCTGGTCTCTCAGTCTCGAAGAGTAATTCTTCATCTAAAGCCACGACAATGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460679.5
CDS-3UTR TCA 90 bp AACACAGACATGACTACTTGCTTGTTTTGTCTGTGGCTGCCTTTGTGCTACAATGAAGGAGGTTTCTTTTaGAAAGTAGCCTTTCCTCTG +
Preference number: 4 (lower is better)
Translates to: NTDMTTCLFCLWLPLCYNEGGFF*KVAFPL
Trigger: CAGAGGAAAGGCTACTTTTCAAAAGAAACCTCCTTC...ATTGTAGCACAAAGGCAGCCACAGACAAAACAAGCAAGTAGTCATGTCTGTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR TCA 90 bp TCTGGGAACAGGAAGTCAATGGCAGATGATTCTTCAAAGGAATTAGGAGATGACGAAGGAGGTTTCTTTTaGAAAGTAGCCTTTCCTCTG +
Preference number: 4 (lower is better)
Translates to: SGNRKSMADDSSKELGDDEGGFF*KVAFPL
Trigger: CAGAGGAAAGGCTACTTTTCAAAAGAAACCTCCTTC...GTCATCTCCTAATTCCTTTGAAGAATCATCTGCCATTGACTTCCTGTTCCCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460679.5
CDS-3UTR TCA 90 bp GTTGGACCCCCTAAATCAGACTCTCGTGCAGAGTCTGATTTATATTTTCATGACTGCAGGGAGTCATACTaGGCTTTTTCGTCTCATTTT +
Preference number: 4 (lower is better)
Translates to: VGPPKSDSRAESDLYFHDCRESY*AFSSHF
Trigger: AAAATGAGACGAAAAAGCTCAGTATGACTCCCTGCA...GTCATGAAAATATAAATCAGACTCTGCACGAGAGTCTGATTTAGGGGGTCCAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR TCA 90 bp AATACCAATTCCATTTCCTCGTGTACCTCTTTGCAAATGTCGGACAAAGCAGAGTGCAGGGAGTCATACTaGGCTTTTTCGTCTCATTTT +
Preference number: 4 (lower is better)
Translates to: NTNSISSCTSLQMSDKAECRESY*AFSSHF
Trigger: AAAATGAGACGAAAAAGCTCAGTATGACTCCCTGCA...CTCTGCTTTGTCCGACATTTGCAAAGAGGTACACGAGGAAATGGAATTGGTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR TCA 90 bp AATACCAATTCCATTTCCTCGTGTACCTCTTTGCAAATGTCGGACAAAGCAGAGGTCAAAGGTAGCAAGTaGCCTTTTCATCCACATTTG +
Preference number: 4 (lower is better)
Translates to: NTNSISSCTSLQMSDKAEVKGSK*PFHPHL
Trigger: CAAATGTGGATGAAAAGGTCACTTGCTACCTTTGAC...CTCTGCTTTGTCCGACATTTGCAAAGAGGTACACGAGGAAATGGAATTGGTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR TCA 90 bp AATACCAATTCCATTTCCTCGTGTACCTCTTTGCAAATGTCGGACAAAGCAGAGAAGAGCAGACTCTTTTaGAAGAAGATTAACCTGCCC +
Preference number: 4 (lower is better)
Translates to: NTNSISSCTSLQMSDKAEKSRLF*KKINLP
Trigger: GGGCAGGTTAATCTTCTTTCAAAAGAGTCTGCTCTT...CTCTGCTTTGTCCGACATTTGCAAAGAGGTACACGAGGAAATGGAATTGGTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR TCA 90 bp GTTGGACCCCCTAAATCAGACTCTCGTGCAGAGTCTGATTTATATTTTCATGACAAGAGCAGACTCTTTTaGAAGAAGATTAACCTGCCC +
Preference number: 4 (lower is better)
Translates to: VGPPKSDSRAESDLYFHDKSRLF*KKINLP
Trigger: GGGCAGGTTAATCTTCTTTCAAAAGAGTCTGCTCTT...GTCATGAAAATATAAATCAGACTCTGCACGAGAGTCTGATTTAGGGGGTCCAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR TCA 90 bp CTCATTGTCGTGGCTTTAGATGAAGAATTACTCTTCGAGACTGAGAGACCAGGAGAAGTCAATGGCAGATaGTTCTTCAAAGGAATTAGG +
Preference number: 4 (lower is better)
Translates to: LIVVALDEELLFETERPGEVNGR*FFKGIR
Trigger: CCTAATTCCTTTGAAGAATCATCTGCCATTGACTTC...TCCTGGTCTCTCAGTCTCGAAGAGTAATTCTTCATCTAAAGCCACGACAATGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460679.5
CDS-3UTR GCA 90 bp AATACCAATTCCATTTCCTCGTGTACCTCTTTGCAAATGTCGGACAAAGCAGAGTTGAGATCATCTACTTaGATTCGTTTCCCAGGACAC +
Preference number: 4 (lower is better)
Translates to: NTNSISSCTSLQMSDKAELRSST*IRFPGH
Trigger: GTGTCCTGGGAAACGAATGCAAGTAGATGATCTCAA...CTCTGCTTTGTCCGACATTTGCAAAGAGGTACACGAGGAAATGGAATTGGTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR GCA 90 bp CCCCTAAATCAGACTCTCGTGCAGAGTCTGATTTATATTTTCATGACCTGTGGATTGAGATCATCTACTTaGATTCGTTTCCCAGGACAC +
Preference number: 4 (lower is better)
Translates to: PLNQTLVQSLIYIFMTCGLRSST*IRFPGH
Trigger: GTGTCCTGGGAAACGAATGCAAGTAGATGATCTCAA...TCCACAGGTCATGAAAATATAAATCAGACTCTGCACGAGAGTCTGATTTAGGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR GCA 90 bp AACACAGACATGACTACTTGCTTGTTTTGTCTGTGGCTGCCTTTGTGCTACAATCACAACTACTACGGCTaGTATGATGCCACTTATGTT +
Preference number: 4 (lower is better)
Translates to: NTDMTTCLFCLWLPLCYNHNYYG*YDATYV
Trigger: AACATAAGTGGCATCATAGCAGCCGTAGTAGTTGTG...ATTGTAGCACAAAGGCAGCCACAGACAAAACAAGCAAGTAGTCATGTCTGTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR GCA 90 bp GAAATGAGACCAGAGGTTCCTTTTGCATCTGTCAGAGTATTTGTTGGACCCCCTCAGAAGAATAGGACATaGCCTAGCCATATTTTGTTT +
Preference number: 4 (lower is better)
Translates to: EMRPEVPFASVRVFVGPPQKNRT*PSHILF
Trigger: AAACAAAATATGGCTAGGGCATGTCCTATTCTTCTG...AGGGGGTCCAACAAATACTCTGACAGATGCAAAAGGAACCTCTGGTCTCATTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR CCA 90 bp AAATCATTTTCACTCATTGTCGTGGCTTTAGATGAAGAATTACTCTTCGAGACTTCCTCTTCCAGGTTTTaGCCTTGCTCAGATGGGGCA +
Preference number: 4 (lower is better)
Translates to: KSFSLIVVALDEELLFETSSSRF*PCSDGA
Trigger: TGCCCCATCTGAGCAAGGCCAAAACCTGGAAGAGGA...AGTCTCGAAGAGTAATTCTTCATCTAAAGCCACGACAATGAGTGAAAATGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000460679.5
CDS-3UTR CCA 90 bp CCCCTAAATCAGACTCTCGTGCAGAGTCTGATTTATATTTTCATGACCTGTGGAATTTGCTTCGCCAATTaGGTAGAAAGAGCAGACTCT +
Preference number: 4 (lower is better)
Translates to: PLNQTLVQSLIYIFMTCGICFAN*VERADS
Trigger: AGAGTCTGCTCTTTCTACCCAATTGGCGAAGCAAAT...TCCACAGGTCATGAAAATATAAATCAGACTCTGCACGAGAGTCTGATTTAGGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR CCA 90 bp GTTGGACCCCCTAAATCAGACTCTCGTGCAGAGTCTGATTTATATTTTCATGACTGCTTGTTTTGTCTGTaGCTGCCTTTGTGCTACAAT +
Preference number: 4 (lower is better)
Translates to: VGPPKSDSRAESDLYFHDCLFCL*LPLCYN
Trigger: ATTGTAGCACAAAGGCAGCCACAGACAAAACAAGCA...GTCATGAAAATATAAATCAGACTCTGCACGAGAGTCTGATTTAGGGGGTCCAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR CCA 90 bp GTTGGACCCCCTAAATCAGACTCTCGTGCAGAGTCTGATTTATATTTTCATGACGCTAAAATAGCCTCTTaGTACTCTACTGCTGTGACT +
Preference number: 4 (lower is better)
Translates to: VGPPKSDSRAESDLYFHDAKIAS*YSTAVT
Trigger: AGTCACAGCAGTAGAGTACCAAGAGGCTATTTTAGC...GTCATGAAAATATAAATCAGACTCTGCACGAGAGTCTGATTTAGGGGGTCCAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000480456.6
3UTR CAA 72 bp ATAAAGTCTTATTGGAACACAGACATGACTACTTGCTaGTTTTGTCTGTGGCTGCCTTTGTGCTACAATGGC +
Preference number: 4 (lower is better)
Translates to: IKSYWNTDMTTC*FCLWLPLCYNG
Trigger: GCCATTGTAGCACAAAGGCAGCCACAGACAAAACAAGCAAGTAGTCATGTCTGTGTTCCAATAAGACTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
3UTR CAA 72 bp ACCATGAGTTGGGAATCTATGCCTGTGGGCCAAATCTaGTCTGTGCCTGCTGTTTTTGTAAATAAAGTCTTA +
Preference number: 4 (lower is better)
Translates to: TMSWESMPVGQI*SVPAVFVNKVL
Trigger: TAAGACTTTATTTACAAAAACAGCAGGCACAGACAAGATTTGGCCCACAGGCATAGATTCCCAACTCATGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR TCA 90 bp GTTGGACCCCCTAAATCAGACTCTCGTGCAGAGTCTGATTTATATTTTCATGACTGTCGTGGCTTTAGATaGAGAATTACTCTTCTGGAA +
Preference number: 4 (lower is better)
Translates to: VGPPKSDSRAESDLYFHDCRGFR*RITLLE
Trigger: TTCCAGAAGAGTAATTCTTCATCTAAAGCCACGACA...GTCATGAAAATATAAATCAGACTCTGCACGAGAGTCTGATTTAGGGGGTCCAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR CCA 90 bp AAATCATTTTCACTCATTGTCGTGGCTTTAGATGAAGAATTACTCTTCGAGACTTTGGCCTTGCTCAGATaGGGCACTAACTTCACAACG +
Preference number: 4 (lower is better)
Translates to: KSFSLIVVALDEELLFETLALLR*GTNFTT
Trigger: CGTTGTGAAGTTAGTGCCCCATCTGAGCAAGGCCAA...AGTCTCGAAGAGTAATTCTTCATCTAAAGCCACGACAATGAGTGAAAATGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460679.5
CDS-3UTR CCA 90 bp GAAATGAGACCAGAGGTTCCTTTTGCATCTGTCAGAGTATTTGTTGGACCCCCTGAAGAATTACTCTTCTaGAAGGAGGTTTCTTTTGAA +
Preference number: 4 (lower is better)
Translates to: EMRPEVPFASVRVFVGPPEELLF*KEVSFE
Trigger: TTCAAAAGAAACCTCCTTCCAGAAGAGTAATTCTTC...AGGGGGTCCAACAAATACTCTGACAGATGCAAAAGGAACCTCTGGTCTCATTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR CCA 90 bp TCTGGGAACAGGAAGTCAATGGCAGATGATTCTTCAAAGGAATTAGGAGATGACTCTTCCACTCTAATCTaGAGGAAACAGTCTTCTTTG +
Preference number: 4 (lower is better)
Translates to: SGNRKSMADDSSKELGDDSSTLI*RKQSSL
Trigger: CAAAGAAGACTGTTTCCTCCAGATTAGAGTGGAAGA...GTCATCTCCTAATTCCTTTGAAGAATCATCTGCCATTGACTTCCTGTTCCCAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460679.5
CDS-3UTR CCA 90 bp CCCCTAAATCAGACTCTCGTGCAGAGTCTGATTTATATTTTCATGACCTGTGGATCTTCCACTCTAATCTaGAGGAAACAGTCTTCTTTG +
Preference number: 4 (lower is better)
Translates to: PLNQTLVQSLIYIFMTCGSSTLI*RKQSSL
Trigger: CAAAGAAGACTGTTTCCTCCAGATTAGAGTGGAAGA...TCCACAGGTCATGAAAATATAAATCAGACTCTGCACGAGAGTCTGATTTAGGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480456.6
CDS-3UTR GCA 90 bp AAATCATTTTCACTCATTGTCGTGGCTTTAGATGAAGAATTACTCTTCGAGACTGTTTCCCAGGACACCTaGGATATCCAACAGAATTGC +
Preference number: 4 (lower is better)
Translates to: KSFSLIVVALDEELLFETVSQDT*DIQQNC
Trigger: GCAATTCTGTTGGATATCGCAGGTGTCCTGGGAAAC...AGTCTCGAAGAGTAATTCTTCATCTAAAGCCACGACAATGAGTGAAAATGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460679.5
CDS-3UTR GCA 90 bp AATACCAATTCCATTTCCTCGTGTACCTCTTTGCAAATGTCGGACAAAGCAGAGCAGAAGAATAGGACATaGCCTAGCCATATTTTGTTT +
Preference number: 4 (lower is better)
Translates to: NTNSISSCTSLQMSDKAEQKNRT*PSHILF
Trigger: AAACAAAATATGGCTAGGGCATGTCCTATTCTTCTG...CTCTGCTTTGTCCGACATTTGCAAAGAGGTACACGAGGAAATGGAATTGGTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR CCA 90 bp ATGGCAGATGATTCTTCAAAGGAATTAGGAGATGACAAACTGTCTGAAGCCATGTTAGGTCTGCCAGATTaGAAGGAGGTTTCTTTTGAA +
Preference number: 4 (lower is better)
Translates to: MADDSSKELGDDKLSEAMLGLPD*KEVSFE
Trigger: TTCAAAAGAAACCTCCTTCCAATCTGGCAGACCTAA...CATGGCTTCAGACAGTTTGTCATCTCCTAATTCCTTTGAAGAATCATCTGCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460679.5
CDS-3UTR TCA 90 bp AGGAAAGCATTCCTCAAACCAAAGAAATCTTCCAACCAAAACATAGGTAACATTGGTACTCTACTGCTGTaGCTACTTGTTGGTCTTTTG +
Preference number: 4 (lower is better)
Translates to: RKAFLKPKKSSNQNIGNIGTLLL*LLVGLL
Trigger: CAAAAGACCAACAAGTAGTCACAGCAGTAGAGTACC...AATGTTACCTATGTTTTGGTTGGAAGATTTCTTTGGTTTGAGGAATGCTTTCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR TCA 90 bp AGGAAAGCATTCCTCAAACCAAAGAAATCTTCCAACCAAAACATAGGTAACATTTTCCCTTCTTTGTCTTaGCATCGTAGCTCTACCACA +
Preference number: 4 (lower is better)
Translates to: RKAFLKPKKSSNQNIGNIFPSLS*HRSSTT
Trigger: TGTGGTAGAGCTACGATGTCAAGACAAAGAAGGGAA...AATGTTACCTATGTTTTGGTTGGAAGATTTCTTTGGTTTGAGGAATGCTTTCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR TCA 90 bp AAATCATTTTCACTCATTGTCGTGGCTTTAGATGAAGAATTACTCTTCGAGACTTTCCCTTCTTTGTCTTaGCATCGTAGCTCTACCACA +
Preference number: 4 (lower is better)
Translates to: KSFSLIVVALDEELLFETFPSLS*HRSSTT
Trigger: TGTGGTAGAGCTACGATGTCAAGACAAAGAAGGGAA...AGTCTCGAAGAGTAATTCTTCATCTAAAGCCACGACAATGAGTGAAAATGATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460679.5
CDS-3UTR GCA 90 bp AGGAAAGCATTCCTCAAACCAAAGAAATCTTCCAACCAAAACATAGGTAACATTCTCTTGGTACTCTACTaGTGTGACTACTTGTTGGTC +
Preference number: 4 (lower is better)
Translates to: RKAFLKPKKSSNQNIGNILLVLY*CDYLLV
Trigger: GACCAACAAGTAGTCACAGCAGTAGAGTACCAAGAG...AATGTTACCTATGTTTTGGTTGGAAGATTTCTTTGGTTTGAGGAATGCTTTCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480456.6
CDS-3UTR CCA 90 bp CCCCTAAATCAGACTCTCGTGCAGAGTCTGATTTATATTTTCATGACCTGTGGATTTTTAAAATCACCTTaGTACTCTACTGCTGTGACT +
Preference number: 4 (lower is better)
Translates to: PLNQTLVQSLIYIFMTCGFLKSP*YSTAVT
Trigger: AGTCACAGCAGTAGAGTACCAAGGTGATTTTAAAAA...TCCACAGGTCATGAAAATATAAATCAGACTCTGCACGAGAGTCTGATTTAGGGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000312957.9
CDS-3UTR CCA 90 bp GTTGGACCCCCTAAATCAGACTCTCGTGCAGAGTCTGATTTATATTTTCATGACGAAGAATTACTCTTCTaGAAGGAGGTTTCTTTTGAA +
Preference number: 4 (lower is better)
Translates to: VGPPKSDSRAESDLYFHDEELLF*KEVSFE
Trigger: TTCAAAAGAAACCTCCTTCCAGAAGAGTAATTCTTC...GTCATGAAAATATAAATCAGACTCTGCACGAGAGTCTGATTTAGGGGGTCCAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR CCA 90 bp AAATCATTTTCACTCATTGTCGTGGCTTTAGATGAAGAATTACTCTTCGAGACTATTGAGCCAGAAATCTaGGAACAGGAAGTCAATGGC +
Preference number: 4 (lower is better)
Translates to: KSFSLIVVALDEELLFETIEPEI*EQEVNG
Trigger: GCCATTGACTTCCTGTTCCCAGATTTCTGGCTCAAT...AGTCTCGAAGAGTAATTCTTCATCTAAAGCCACGACAATGAGTGAAAATGATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460679.5
CDS-3UTR TCA 90 bp TTGAAATCATTTTCACTCATTGTCGTGGCTTTAGATGAAGAATTACTCTTCGAGTGTATTCATTGTGTATaGGCTGTTGGTGCTTTGGGA +
Preference number: 4 (lower is better)
Translates to: LKSFSLIVVALDEELLFECIHCV*AVGALG
Trigger: TCCCAAAGCACCAACAGCTCATACACAATGAATACA...CTCGAAGAGTAATTCTTCATCTAAAGCCACGACAATGAGTGAAAATGATTTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460679.5
CDS-3UTR TCA 90 bp TGCTTGAAATCATTTTCACTCATTGTCGTGGCTTTAGATGAAGAATTACTCTTCTGTCGTGGCTTTAGATaGAGAATTACTCTTCGAGAC +
Preference number: 4 (lower is better)
Translates to: CLKSFSLIVVALDEELLFCRGFR*RITLRD
Trigger: GTCTCGAAGAGTAATTCTTCATCTAAAGCCACGACA...GAAGAGTAATTCTTCATCTAAAGCCACGACAATGAGTGAAAATGATTTCAAGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460679.5
CDS-3UTR GCA 90 bp TGCTTGAAATCATTTTCACTCATTGTCGTGGCTTTAGATGAAGAATTACTCTTCTTGAGATCATCTACTTaGATTCGTTTCCCAGGACAC +
Preference number: 4 (lower is better)
Translates to: CLKSFSLIVVALDEELLFLRSST*IRFPGH
Trigger: GTGTCCTGGGAAACGAATGCAAGTAGATGATCTCAA...GAAGAGTAATTCTTCATCTAAAGCCACGACAATGAGTGAAAATGATTTCAAGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460679.5
CDS-3UTR GCA 90 bp AAATCATTTTCACTCATTGTCGTGGCTTTAGATGAAGAATTACTCTTCGAGACTCACAACTACTACGGCTaGTATGATGCCACTTATGTT +
Preference number: 4 (lower is better)
Translates to: KSFSLIVVALDEELLFETHNYYG*YDATYV
Trigger: AACATAAGTGGCATCATAGCAGCCGTAGTAGTTGTG...AGTCTCGAAGAGTAATTCTTCATCTAAAGCCACGACAATGAGTGAAAATGATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460679.5
CDS-3UTR GCA 90 bp AGGAAAGCATTCCTCAAACCAAAGAAATCTTCCAACCAAAACATAGGTAACATTACAGACATGACTACTTaGTTGTTTTGTCTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: RKAFLKPKKSSNQNIGNITDMTT*LFCLWL
Trigger: CAGCCACAGACAAAACAAGCAAGTAGTCATGTCTGT...AATGTTACCTATGTTTTGGTTGGAAGATTTCTTTGGTTTGAGGAATGCTTTCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR CCA 90 bp TGCTTGAAATCATTTTCACTCATTGTCGTGGCTTTAGATGAAGAATTACTCTTCTGTGTATTCAGGAGCTaGATTCCCTTCTTTGTCTTG +
Preference number: 4 (lower is better)
Translates to: CLKSFSLIVVALDEELLFCVFRS*IPFFVL
Trigger: CAAGACAAAGAAGGGAATCCAGCTCCTGAATACACA...GAAGAGTAATTCTTCATCTAAAGCCACGACAATGAGTGAAAATGATTTCAAGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460679.5
CDS-3UTR TCA 90 bp AGGAAAGCATTCCTCAAACCAAAGAAATCTTCCAACCAAAACATAGGTAACATTTGTCGTGGCTTTAGATaGAGAATTACTCTTCTGGAA +
Preference number: 4 (lower is better)
Translates to: RKAFLKPKKSSNQNIGNICRGFR*RITLLE
Trigger: TTCCAGAAGAGTAATTCTTCATCTAAAGCCACGACA...AATGTTACCTATGTTTTGGTTGGAAGATTTCTTTGGTTTGAGGAATGCTTTCCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS GCA 90 bp GCGGTGGCGGCTCCTCCTCGCCATCTTCCCGGGGCGGCAGCCGGCTaGTCTGAGGAGGTCGAGGGTCCCGGCGGCAGGAGCGCAGGAGGC +
Preference number: 5 (lower is better)
Translates to: AVAAPPRHLPGAAAG*SEEVEGPGGRSAGG
Trigger: GCCTCCTGCGCTCCTGCCGCCGGGACCCTCGACCTCCTCAGAGCAGCCGGCTGCCGCCCCGGGAAGATGGCGAGGAGGAGCCGCCACCGC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312957.9
ENST00000400532.5
ENST00000480456.6
CDS-3UTR CAA 90 bp GGTTCAAGTGATTCTCCTGTCTCCCAAGCAGCTGGAACTGCAGGCACATGCCACGGAGGCCGGGGGCCCTaGAACTTCTGGGGCGGGAAA +
Preference number: 5 (lower is better)
Translates to: GSSDSPVSQAAGTAGTCHGGRGP*NFWGGK
Trigger: TTTCCCGCCCCAGAAGTTCAAGGGCCCCCGGCCTCC...GTGGCATGTGCCTGCAGTTCCAGCTGCTTGGGAGACAGGAGAATCACTTGAACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400532.5
CDS-3UTR CAA 90 bp GGTTCAAGTGATTCTCCTGTCTCCCAAGCAGCTGGAACTGCAGGCACATGCCACCCCACGCCTCCGGGATaGATCGGCTTTGTGTCTGGT +
Preference number: 5 (lower is better)
Translates to: GSSDSPVSQAAGTAGTCHPTPPG*IGFVSG
Trigger: ACCAGACACAAAGCCGATCAATCCCGGAGGCGTGGG...GTGGCATGTGCCTGCAGTTCCAGCTGCTTGGGAGACAGGAGAATCACTTGAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400532.5
CDS-3UTR CAA 90 bp CGGGTTCAAGTGATTCTCCTGTCTCCCAAGCAGCTGGAACTGCAGGCACATGCCATCCTCTTCCAGGTTTaGGCCTTGCTCAGATGGGGC +
Preference number: 5 (lower is better)
Translates to: RVQVILLSPKQLELQAHAILFQV*ALLRWG
Trigger: GCCCCATCTGAGCAAGGCCAAAACCTGGAAGAGGAT...GGCATGTGCCTGCAGTTCCAGCTGCTTGGGAGACAGGAGAATCACTTGAACCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400532.5
CDS-3UTR CAA 90 bp CGGGTTCAAGTGATTCTCCTGTCTCCCAAGCAGCTGGAACTGCAGGCACATGCCTTCCAGGTTTTGGCCTaGCTCAGATGGGGCACTAAC +
Preference number: 5 (lower is better)
Translates to: RVQVILLSPKQLELQAHAFQVLA*LRWGTN
Trigger: GTTAGTGCCCCATCTGAGCAAGGCCAAAACCTGGAA...GGCATGTGCCTGCAGTTCCAGCTGCTTGGGAGACAGGAGAATCACTTGAACCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400532.5
CDS-3UTR CAA 90 bp GTGAAGTCACCACTCCTGCAGGGAAAGGTATCTGCAAACTTGTGTAGGCTCCAGAGGCAGGAGAAGTGCTaGAATCTGGGAGGCGGAGGG +
Preference number: 5 (lower is better)
Translates to: VKSPLLQGKVSANLCRLQRQEKC*NLGGGG
Trigger: CCCTCCGCCTCCCAGATTCAAGCACTTCTCCTGCCT...CTGGAGCCTACACAAGTTTGCAGATACCTTTCCCTGCAGGAGTGGTGACTTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR CAA 90 bp AATACCAATTCCATTTCCTCGTGTACCTCTTTGCAAATGTCGGACAAAGCAGAGGGAGGCCGGGGGCCCTaGAACTTCTGGGGCGGGAAA +
Preference number: 5 (lower is better)
Translates to: NTNSISSCTSLQMSDKAEGGRGP*NFWGGK
Trigger: TTTCCCGCCCCAGAAGTTCAAGGGCCCCCGGCCTCC...CTCTGCTTTGTCCGACATTTGCAAAGAGGTACACGAGGAAATGGAATTGGTATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR CAA 90 bp CGGGTTCAAGTGATTCTCCTGTCTCCCAAGCAGCTGGAACTGCAGGCACATGCCCTACTTGTTGGTCTTTaGGGGCAGAAAACCCATAGG +
Preference number: 5 (lower is better)
Translates to: RVQVILLSPKQLELQAHALLVGL*GQKTHR
Trigger: CCTATGGGTTTTCTGCCCCAAAAGACCAACAAGTAG...GGCATGTGCCTGCAGTTCCAGCTGCTTGGGAGACAGGAGAATCACTTGAACCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400532.5
CDS-3UTR CAA 90 bp CGGGTTCAAGTGATTCTCCTGTCTCCCAAGCAGCTGGAACTGCAGGCACATGCCTACTGCTGTGACTACTaGTTGGTCTTTTGGGGCAGA +
Preference number: 5 (lower is better)
Translates to: RVQVILLSPKQLELQAHAYCCDY*LVFWGR
Trigger: TCTGCCCCAAAAGACCAACAAGTAGTCACAGCAGTA...GGCATGTGCCTGCAGTTCCAGCTGCTTGGGAGACAGGAGAATCACTTGAACCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400532.5
CDS-3UTR CAA 90 bp CGGGTTCAAGTGATTCTCCTGTCTCCCAAGCAGCTGGAACTGCAGGCACATGCCATTGTGTATGAGCTGTaGGTGCTTTGGGAGCCAAGT +
Preference number: 5 (lower is better)
Translates to: RVQVILLSPKQLELQAHAIVYEL*VLWEPS
Trigger: ACTTGGCTCCCAAAGCACCAACAGCTCATACACAAT...GGCATGTGCCTGCAGTTCCAGCTGCTTGGGAGACAGGAGAATCACTTGAACCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400532.5
CDS-3UTR CAA 90 bp GCCCACTGTGTTTCAAGAGGGGTACCAGATGCAGGGAGTCATACTGAGCTTTTTATCCTCTTCCAGGTTTaGGCCTTGCTCAGATGGGGC +
Preference number: 5 (lower is better)
Translates to: AHCVSRGVPDAGSHTELFILFQV*ALLRWG
Trigger: GCCCCATCTGAGCAAGGCCAAAACCTGGAAGAGGAT...AAAAAGCTCAGTATGACTCCCTGCATCTGGTACCCCTCTTGAAACACAGTGGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR CAA 90 bp CGGGTTCAAGTGATTCTCCTGTCTCCCAAGCAGCTGGAACTGCAGGCACATGCCGTTGAGATCATCTACTaGCATTCGTTTCCCAGGACA +
Preference number: 5 (lower is better)
Translates to: RVQVILLSPKQLELQAHAVEIIY*HSFPRT
Trigger: TGTCCTGGGAAACGAATGCAAGTAGATGATCTCAAC...GGCATGTGCCTGCAGTTCCAGCTGCTTGGGAGACAGGAGAATCACTTGAACCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400532.5
CDS-3UTR CAA 90 bp GTGCAAATCCTTGGGCATAAGACCCATCCCGCTTCCTCCTTTCTGTGGGTGTGTCCTGTGGGCCAAATCTaGTCTGTGCCTGCTGTTTTT +
Preference number: 5 (lower is better)
Translates to: VQILGHKTHPASSFLWVCPVGQI*SVPAVF
Trigger: AAAAACAGCAGGCACAGACAAGATTTGGCCCACAGG...ACACACCCACAGAAAGGAGGAAGCGGGATGGGTCTTATGCCCAAGGATTTGCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR CAA 90 bp GTGACCTTTTCATCCACATTTGCCCAGAAGAATAGGACATGCCCTAGCCATATTCCCACGCCTCCGGGATaGATCGGCTTTGTGTCTGGT +
Preference number: 5 (lower is better)
Translates to: VTFSSTFAQKNRTCPSHIPTPPG*IGFVSG
Trigger: ACCAGACACAAAGCCGATCAATCCCGGAGGCGTGGG...AATATGGCTAGGGCATGTCCTATTCTTCTGGGCAAATGTGGATGAAAAGGTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR CAA 90 bp GGTTCAAGTGATTCTCCTGTCTCCCAAGCAGCTGGAACTGCAGGCACATGCCACTGCTGTGACTACTTGTaGGTCTTTTGGGGCAGAAAA +
Preference number: 5 (lower is better)
Translates to: GSSDSPVSQAAGTAGTCHCCDYL*VFWGRK
Trigger: TTTTCTGCCCCAAAAGACCAACAAGTAGTCACAGCA...GTGGCATGTGCCTGCAGTTCCAGCTGCTTGGGAGACAGGAGAATCACTTGAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400532.5
CDS-3UTR CAA 90 bp GGTTCAAGTGATTCTCCTGTCTCCCAAGCAGCTGGAACTGCAGGCACATGCCACCGATATCCAACAGAATaGCGGGCTTCACAGGAATAT +
Preference number: 5 (lower is better)
Translates to: GSSDSPVSQAAGTAGTCHRYPTE*RASQEY
Trigger: ATATTCCTGTGAAGCCCGCAATTCTGTTGGATATCG...GTGGCATGTGCCTGCAGTTCCAGCTGCTTGGGAGACAGGAGAATCACTTGAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400532.5
CDS-3UTR CAA 90 bp GTGACCTTTTCATCCACATTTGCCCAGAAGAATAGGACATGCCCTAGCCATATTAGGCAGGAGAAGTGCTaGAATCTGGGAGGCGGAGGG +
Preference number: 5 (lower is better)
Translates to: VTFSSTFAQKNRTCPSHIRQEKC*NLGGGG
Trigger: CCCTCCGCCTCCCAGATTCAAGCACTTCTCCTGCCT...AATATGGCTAGGGCATGTCCTATTCTTCTGGGCAAATGTGGATGAAAAGGTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR CAA 90 bp GTGAAGTCACCACTCCTGCAGGGAAAGGTATCTGCAAACTTGTGTAGGCTCCAGGTGAATCCTGGGGATTaGCTTCGCCAATTGGGTAGA +
Preference number: 5 (lower is better)
Translates to: VKSPLLQGKVSANLCRLQVNPGD*LRQLGR
Trigger: TCTACCCAATTGGCGAAGCAAATCCCCAGGATTCAC...CTGGAGCCTACACAAGTTTGCAGATACCTTTCCCTGCAGGAGTGGTGACTTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR CAA 90 bp GCCCACTGTGTTTCAAGAGGGGTACCAGATGCAGGGAGTCATACTGAGCTTTTTTGTCTGTGGCTGCCTTaGTGCTACAATGGCAGAGTC +
Preference number: 5 (lower is better)
Translates to: AHCVSRGVPDAGSHTELFCLWLP*CYNGRV
Trigger: GACTCTGCCATTGTAGCACAAAGGCAGCCACAGACA...AAAAAGCTCAGTATGACTCCCTGCATCTGGTACCCCTCTTGAAACACAGTGGGC
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR CAA 90 bp GTGAAGTCACCACTCCTGCAGGGAAAGGTATCTGCAAACTTGTGTAGGCTCCAGGAGTCATCTATCCTCTaGGCATGCCAATGCAAGAGG +
Preference number: 5 (lower is better)
Translates to: VKSPLLQGKVSANLCRLQESSIL*ACQCKR
Trigger: CCTCTTGCATTGGCATGCCAAGAGGATAGATGACTC...CTGGAGCCTACACAAGTTTGCAGATACCTTTCCCTGCAGGAGTGGTGACTTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR CAA 90 bp GGTTCAAGTGATTCTCCTGTCTCCCAAGCAGCTGGAACTGCAGGCACATGCCACGTCTTCTTTGGGGTTTaGCAGGCTAAAATAGCCTCT +
Preference number: 5 (lower is better)
Translates to: GSSDSPVSQAAGTAGTCHVFFGV*QAKIAS
Trigger: AGAGGCTATTTTAGCCTGCAAAACCCCAAAGAAGAC...GTGGCATGTGCCTGCAGTTCCAGCTGCTTGGGAGACAGGAGAATCACTTGAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400532.5
CDS CCA 90 bp AATAGCCTCTTGGTACTCTACTGCTGTGACTACTTGTTGGTCTTTTaGGGCAGAAAACCCATAGGCCTTATGATAGCCCAGGGCGACCAC +
Preference number: 5 (lower is better)
Translates to: NSLLVLYCCDYLLVF*GRKPIGLMIAQGDH
Trigger: GTGGTCGCCCTGGGCTATCATAAGGCCTATGGGTTTTCTGCCCCAAAAGACCAACAAGTAGTCACAGCAGTAGAGTACCAAGAGGCTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400532.5
ENST00000480456.6
CDS-3UTR CAA 90 bp CCCCTAAATCAGACTCTCGTGCAGAGTCTGATTTATATTTTCATGACCTGTGGACCCACGCCTCCGGGATaGATCGGCTTTGTGTCTGGT +
Preference number: 5 (lower is better)
Translates to: PLNQTLVQSLIYIFMTCGPTPPG*IGFVSG
Trigger: ACCAGACACAAAGCCGATCAATCCCGGAGGCGTGGG...TCCACAGGTCATGAAAATATAAATCAGACTCTGCACGAGAGTCTGATTTAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR CAA 90 bp CGGGTTCAAGTGATTCTCCTGTCTCCCAAGCAGCTGGAACTGCAGGCACATGCCTCTCCAGTGTCCAGTTaGGAAACAGTATTAAATTGC +
Preference number: 5 (lower is better)
Translates to: RVQVILLSPKQLELQAHASPVSS*ETVLNC
Trigger: GCAATTTAATACTGTTTCCAAACTGGACACTGGAGA...GGCATGTGCCTGCAGTTCCAGCTGCTTGGGAGACAGGAGAATCACTTGAACCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400532.5
CDS-3UTR CAA 90 bp GGTTCAAGTGATTCTCCTGTCTCCCAAGCAGCTGGAACTGCAGGCACATGCCACGGAAGGAGGTTTCTTTaGAAAAGTAGCCTTTCCTCT +
Preference number: 5 (lower is better)
Translates to: GSSDSPVSQAAGTAGTCHGRRFL*KSSLSS
Trigger: AGAGGAAAGGCTACTTTTCAAAAGAAACCTCCTTCC...GTGGCATGTGCCTGCAGTTCCAGCTGCTTGGGAGACAGGAGAATCACTTGAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400532.5
CDS-3UTR CAA 90 bp GGTTCAAGTGATTCTCCTGTCTCCCAAGCAGCTGGAACTGCAGGCACATGCCACAGGAAACAGTCTTCTTaGGGGTTTTGCAGGCTAAAA +
Preference number: 5 (lower is better)
Translates to: GSSDSPVSQAAGTAGTCHRKQSS*GFCRLK
Trigger: TTTTAGCCTGCAAAACCCCAAAGAAGACTGTTTCCT...GTGGCATGTGCCTGCAGTTCCAGCTGCTTGGGAGACAGGAGAATCACTTGAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400532.5
CDS CCA 90 bp GGAGCCACTAATACTTCCAGAGTGACTGTATCCTCTTCCAGGTTTTaGCCTTGCTCAGATGGGGCACTAACTTCACAACGATATTTCCCC +
Preference number: 5 (lower is better)
Translates to: GATNTSRVTVSSSRF*PCSDGALTSQRYFP
Trigger: GGGGAAATATCGTTGTGAAGTTAGTGCCCCATCTGAGCAAGGCCAAAACCTGGAAGAGGATACAGTCACTCTGGAAGTATTAGTGGCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312957.9
ENST00000400532.5
ENST00000460679.5
ENST00000480456.6
CDS-3UTR CAA 90 bp GTGAAGTCACCACTCCTGCAGGGAAAGGTATCTGCAAACTTGTGTAGGCTCCAGTGCTGTGACTACTTGTaGGTCTTTTGGGGCAGAAAA +
Preference number: 5 (lower is better)
Translates to: VKSPLLQGKVSANLCRLQCCDYL*VFWGRK
Trigger: TTTTCTGCCCCAAAAGACCAACAAGTAGTCACAGCA...CTGGAGCCTACACAAGTTTGCAGATACCTTTCCCTGCAGGAGTGGTGACTTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR CAA 90 bp GTGACCTTTTCATCCACATTTGCCCAGAAGAATAGGACATGCCCTAGCCATATTATCCTCTTCCAGGTTTaGGCCTTGCTCAGATGGGGC +
Preference number: 5 (lower is better)
Translates to: VTFSSTFAQKNRTCPSHIILFQV*ALLRWG
Trigger: GCCCCATCTGAGCAAGGCCAAAACCTGGAAGAGGAT...AATATGGCTAGGGCATGTCCTATTCTTCTGGGCAAATGTGGATGAAAAGGTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR CAA 90 bp GGTTCAAGTGATTCTCCTGTCTCCCAAGCAGCTGGAACTGCAGGCACATGCCACCAGTTTTTGTATTCATaGTGTATGAGCTGTTGGTGC +
Preference number: 5 (lower is better)
Translates to: GSSDSPVSQAAGTAGTCHQFLYS*CMSCWC
Trigger: GCACCAACAGCTCATACACAATGAATACAAAAACTG...GTGGCATGTGCCTGCAGTTCCAGCTGCTTGGGAGACAGGAGAATCACTTGAACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400532.5
CDS-3UTR CAA 90 bp GGTTCAAGTGATTCTCCTGTCTCCCAAGCAGCTGGAACTGCAGGCACATGCCACGCAGAGTTCCAGTTTTaGTATTCATTGTGTATGAGC +
Preference number: 5 (lower is better)
Translates to: GSSDSPVSQAAGTAGTCHAEFQF*YSLCMS
Trigger: GCTCATACACAATGAATACAAAAACTGGAACTCTGC...GTGGCATGTGCCTGCAGTTCCAGCTGCTTGGGAGACAGGAGAATCACTTGAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400532.5
CDS-3UTR CAA 90 bp CGGGTTCAAGTGATTCTCCTGTCTCCCAAGCAGCTGGAACTGCAGGCACATGCCATGATGCCACTTATGTaGAGATCATCTACTTGCATT +
Preference number: 5 (lower is better)
Translates to: RVQVILLSPKQLELQAHAMMPLM*RSSTCI
Trigger: AATGCAAGTAGATGATCTCAACATAAGTGGCATCAT...GGCATGTGCCTGCAGTTCCAGCTGCTTGGGAGACAGGAGAATCACTTGAACCCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400532.5
CDS-3UTR CAA 90 bp GTGAAGTCACCACTCCTGCAGGGAAAGGTATCTGCAAACTTGTGTAGGCTCCAGGGTGAAATAAGCCACTaGGGTTTGTGTTTGACCATC +
Preference number: 5 (lower is better)
Translates to: VKSPLLQGKVSANLCRLQGEISH*GLCLTI
Trigger: GATGGTCAAACACAAACCCAAGTGGCTTATTTCACC...CTGGAGCCTACACAAGTTTGCAGATACCTTTCCCTGCAGGAGTGGTGACTTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR CAA 90 bp GTGCAAATCCTTGGGCATAAGACCCATCCCGCTTCCTCCTTTCTGTGGGTGTGTCCTTTTCATCCACATTaGCCCAGAAGAATAGGACAT +
Preference number: 5 (lower is better)
Translates to: VQILGHKTHPASSFLWVCPFHPH*PRRIGH
Trigger: ATGTCCTATTCTTCTGGGCAAATGTGGATGAAAAGG...ACACACCCACAGAAAGGAGGAAGCGGGATGGGTCTTATGCCCAAGGATTTGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR CAA 90 bp GTGAAGTCACCACTCCTGCAGGGAAAGGTATCTGCAAACTTGTGTAGGCTCCAGTCAATACTCTGCCCTTaGTGTGGGGGAAAACATTCT +
Preference number: 5 (lower is better)
Translates to: VKSPLLQGKVSANLCRLQSILCP*CGGKHS
Trigger: AGAATGTTTTCCCCCACACAAAGGGCAGAGTATTGA...CTGGAGCCTACACAAGTTTGCAGATACCTTTCCCTGCAGGAGTGGTGACTTCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS CCA 90 bp TTCCAGAGTGACTGTATCCTCTTCCAGGTTTTGGCCTTGCTCAGATaGGGCACTAACTTCACAACGATATTTCCCCGCATCACTTCTTGT +
Preference number: 5 (lower is better)
Translates to: FQSDCILFQVLALLR*GTNFTTIFPRITSC
Trigger: ACAAGAAGTGATGCGGGGAAATATCGTTGTGAAGTTAGTGCCCCATCTGAGCAAGGCCAAAACCTGGAAGAGGATACAGTCACTCTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312957.9
ENST00000400532.5
ENST00000460679.5
ENST00000480456.6
CDS-3UTR CAA 90 bp GTGCAAATCCTTGGGCATAAGACCCATCCCGCTTCCTCCTTTCTGTGGGTGTGTTCTCCAGTGTCCAGTTaGGAAACAGTATTAAATTGC +
Preference number: 5 (lower is better)
Translates to: VQILGHKTHPASSFLWVCSPVSS*ETVLNC
Trigger: GCAATTTAATACTGTTTCCAAACTGGACACTGGAGA...ACACACCCACAGAAAGGAGGAAGCGGGATGGGTCTTATGCCCAAGGATTTGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR CAA 90 bp GCCCACTGTGTTTCAAGAGGGGTACCAGATGCAGGGAGTCATACTGAGCTTTTTGACCAGAGGTTCCTTTaGCATCTGTCAGAGTATTTG +
Preference number: 5 (lower is better)
Translates to: AHCVSRGVPDAGSHTELFDQRFL*HLSEYL
Trigger: CAAATACTCTGACAGATGCAAAAGGAACCTCTGGTC...AAAAAGCTCAGTATGACTCCCTGCATCTGGTACCCCTCTTGAAACACAGTGGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR CAA 90 bp GAAATGAGACCAGAGGTTCCTTTTGCATCTGTCAGAGTATTTGTTGGACCCCCTCCTCCACATCCCTCCTaGTCCAAAAGCAGAATTGTC +
Preference number: 5 (lower is better)
Translates to: EMRPEVPFASVRVFVGPPPPHPS*SKSRIV
Trigger: GACAATTCTGCTTTTGGACAAGGAGGGATGTGGAGG...AGGGGGTCCAACAAATACTCTGACAGATGCAAAAGGAACCTCTGGTCTCATTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR CAA 90 bp GAAATGAGACCAGAGGTTCCTTTTGCATCTGTCAGAGTATTTGTTGGACCCCCTGGGTGCTTAATCCATTaGTTCGGTGAATCCTGGGGA +
Preference number: 5 (lower is better)
Translates to: EMRPEVPFASVRVFVGPPGCLIH*FGESWG
Trigger: TCCCCAGGATTCACCGAACAAATGGATTAAGCACCC...AGGGGGTCCAACAAATACTCTGACAGATGCAAAAGGAACCTCTGGTCTCATTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR CAA 90 bp GTGCAAATCCTTGGGCATAAGACCCATCCCGCTTCCTCCTTTCTGTGGGTGTGTATGGGATTTTACCAGTaGTTAGTGTTCAAGTTCCTC +
Preference number: 5 (lower is better)
Translates to: VQILGHKTHPASSFLWVCMGFYQ*LVFKFL
Trigger: GAGGAACTTGAACACTAACAACTGGTAAAATCCCAT...ACACACCCACAGAAAGGAGGAAGCGGGATGGGTCTTATGCCCAAGGATTTGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR CAA 90 bp GAAATGAGACCAGAGGTTCCTTTTGCATCTGTCAGAGTATTTGTTGGACCCCCTCTACTTGTTGGTCTTTaGGGGCAGAAAACCCATAGG +
Preference number: 5 (lower is better)
Translates to: EMRPEVPFASVRVFVGPPLLVGL*GQKTHR
Trigger: CCTATGGGTTTTCTGCCCCAAAAGACCAACAAGTAG...AGGGGGTCCAACAAATACTCTGACAGATGCAAAAGGAACCTCTGGTCTCATTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR CAA 90 bp GTTGGACCCCCTAAATCAGACTCTCGTGCAGAGTCTGATTTATATTTTCATGACTTCCAGGTTTTGGCCTaGCTCAGATGGGGCACTAAC +
Preference number: 5 (lower is better)
Translates to: VGPPKSDSRAESDLYFHDFQVLA*LRWGTN
Trigger: GTTAGTGCCCCATCTGAGCAAGGCCAAAACCTGGAA...GTCATGAAAATATAAATCAGACTCTGCACGAGAGTCTGATTTAGGGGGTCCAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR CAA 90 bp TCTGGGAACAGGAAGTCAATGGCAGATGATTCTTCAAAGGAATTAGGAGATGACTTCCAGGTTTTGGCCTaGCTCAGATGGGGCACTAAC +
Preference number: 5 (lower is better)
Translates to: SGNRKSMADDSSKELGDDFQVLA*LRWGTN
Trigger: GTTAGTGCCCCATCTGAGCAAGGCCAAAACCTGGAA...GTCATCTCCTAATTCCTTTGAAGAATCATCTGCCATTGACTTCCTGTTCCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460679.5
CDS-3UTR CAA 90 bp CCCCTAAATCAGACTCTCGTGCAGAGTCTGATTTATATTTTCATGACCTGTGGATTCCAGGTTTTGGCCTaGCTCAGATGGGGCACTAAC +
Preference number: 5 (lower is better)
Translates to: PLNQTLVQSLIYIFMTCGFQVLA*LRWGTN
Trigger: GTTAGTGCCCCATCTGAGCAAGGCCAAAACCTGGAA...TCCACAGGTCATGAAAATATAAATCAGACTCTGCACGAGAGTCTGATTTAGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR CAA 90 bp GTGCAAATCCTTGGGCATAAGACCCATCCCGCTTCCTCCTTTCTGTGGGTGTGTATGATGCCACTTATGTaGAGATCATCTACTTGCATT +
Preference number: 5 (lower is better)
Translates to: VQILGHKTHPASSFLWVCMMPLM*RSSTCI
Trigger: AATGCAAGTAGATGATCTCAACATAAGTGGCATCAT...ACACACCCACAGAAAGGAGGAAGCGGGATGGGTCTTATGCCCAAGGATTTGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR CAA 90 bp GAAATGAGACCAGAGGTTCCTTTTGCATCTGTCAGAGTATTTGTTGGACCCCCTTCCTCGTGTACCTCTTaGCAAATGTCGGACAAAGCA +
Preference number: 5 (lower is better)
Translates to: EMRPEVPFASVRVFVGPPSSCTS*QMSDKA
Trigger: TGCTTTGTCCGACATTTGCAAAGAGGTACACGAGGA...AGGGGGTCCAACAAATACTCTGACAGATGCAAAAGGAACCTCTGGTCTCATTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR CAA 90 bp GAAATGAGACCAGAGGTTCCTTTTGCATCTGTCAGAGTATTTGTTGGACCCCCTGATTTGCTTCGCCAATaGGGTAGAAAGAGCAGACTC +
Preference number: 5 (lower is better)
Translates to: EMRPEVPFASVRVFVGPPDLLRQ*GRKSRL
Trigger: GAGTCTGCTCTTTCTACCCAATTGGCGAAGCAAATC...AGGGGGTCCAACAAATACTCTGACAGATGCAAAAGGAACCTCTGGTCTCATTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR CAA 90 bp GTGACCTTTTCATCCACATTTGCCCAGAAGAATAGGACATGCCCTAGCCATATTGTGAATCCTGGGGATTaGCTTCGCCAATTGGGTAGA +
Preference number: 5 (lower is better)
Translates to: VTFSSTFAQKNRTCPSHIVNPGD*LRQLGR
Trigger: TCTACCCAATTGGCGAAGCAAATCCCCAGGATTCAC...AATATGGCTAGGGCATGTCCTATTCTTCTGGGCAAATGTGGATGAAAAGGTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR CAA 90 bp GTGACCTTTTCATCCACATTTGCCCAGAAGAATAGGACATGCCCTAGCCATATTGAGTCATCTATCCTCTaGGCATGCCAATGCAAGAGG +
Preference number: 5 (lower is better)
Translates to: VTFSSTFAQKNRTCPSHIESSIL*ACQCKR
Trigger: CCTCTTGCATTGGCATGCCAAGAGGATAGATGACTC...AATATGGCTAGGGCATGTCCTATTCTTCTGGGCAAATGTGGATGAAAAGGTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR CAA 90 bp GTGAAGTCACCACTCCTGCAGGGAAAGGTATCTGCAAACTTGTGTAGGCTCCAGATGGGATTTTACCAGTaGTTAGTGTTCAAGTTCCTC +
Preference number: 5 (lower is better)
Translates to: VKSPLLQGKVSANLCRLQMGFYQ*LVFKFL
Trigger: GAGGAACTTGAACACTAACAACTGGTAAAATCCCAT...CTGGAGCCTACACAAGTTTGCAGATACCTTTCCCTGCAGGAGTGGTGACTTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR CAA 90 bp GTGACCTTTTCATCCACATTTGCCCAGAAGAATAGGACATGCCCTAGCCATATTATTGTGTATGAGCTGTaGGTGCTTTGGGAGCCAAGT +
Preference number: 5 (lower is better)
Translates to: VTFSSTFAQKNRTCPSHIIVYEL*VLWEPS
Trigger: ACTTGGCTCCCAAAGCACCAACAGCTCATACACAAT...AATATGGCTAGGGCATGTCCTATTCTTCTGGGCAAATGTGGATGAAAAGGTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR CAA 90 bp GAAATGAGACCAGAGGTTCCTTTTGCATCTGTCAGAGTATTTGTTGGACCCCCTGTTGAGATCATCTACTaGCATTCGTTTCCCAGGACA +
Preference number: 5 (lower is better)
Translates to: EMRPEVPFASVRVFVGPPVEIIY*HSFPRT
Trigger: TGTCCTGGGAAACGAATGCAAGTAGATGATCTCAAC...AGGGGGTCCAACAAATACTCTGACAGATGCAAAAGGAACCTCTGGTCTCATTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR CAA 90 bp GTGACCTTTTCATCCACATTTGCCCAGAAGAATAGGACATGCCCTAGCCATATTTCCTCGTGTACCTCTTaGCAAATGTCGGACAAAGCA +
Preference number: 5 (lower is better)
Translates to: VTFSSTFAQKNRTCPSHISSCTS*QMSDKA
Trigger: TGCTTTGTCCGACATTTGCAAAGAGGTACACGAGGA...AATATGGCTAGGGCATGTCCTATTCTTCTGGGCAAATGTGGATGAAAAGGTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR CAA 90 bp GAAATGAGACCAGAGGTTCCTTTTGCATCTGTCAGAGTATTTGTTGGACCCCCTCATCTGTCAGAGTATTaGTTGGACCCCCTAAATCAG +
Preference number: 5 (lower is better)
Translates to: EMRPEVPFASVRVFVGPPHLSEY*LDPLNQ
Trigger: CTGATTTAGGGGGTCCAACAAATACTCTGACAGATG...AGGGGGTCCAACAAATACTCTGACAGATGCAAAAGGAACCTCTGGTCTCATTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR CAA 90 bp CCCCTAAATCAGACTCTCGTGCAGAGTCTGATTTATATTTTCATGACCTGTGGAACAAAGTGCAAATCCTaGGGCATAAGACCCATCCCG +
Preference number: 5 (lower is better)
Translates to: PLNQTLVQSLIYIFMTCGTKCKS*GIRPIP
Trigger: CGGGATGGGTCTTATGCCCAAGGATTTGCACTTTGT...TCCACAGGTCATGAAAATATAAATCAGACTCTGCACGAGAGTCTGATTTAGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR CAA 90 bp GTTGGACCCCCTAAATCAGACTCTCGTGCAGAGTCTGATTTATATTTTCATGACACAAAGTGCAAATCCTaGGGCATAAGACCCATCCCG +
Preference number: 5 (lower is better)
Translates to: VGPPKSDSRAESDLYFHDTKCKS*GIRPIP
Trigger: CGGGATGGGTCTTATGCCCAAGGATTTGCACTTTGT...GTCATGAAAATATAAATCAGACTCTGCACGAGAGTCTGATTTAGGGGGTCCAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR CAA 90 bp CCCCTAAATCAGACTCTCGTGCAGAGTCTGATTTATATTTTCATGACCTGTGGACCTCCACATCCCTCCTaGTCCAAAAGCAGAATTGTC +
Preference number: 5 (lower is better)
Translates to: PLNQTLVQSLIYIFMTCGPPHPS*SKSRIV
Trigger: GACAATTCTGCTTTTGGACAAGGAGGGATGTGGAGG...TCCACAGGTCATGAAAATATAAATCAGACTCTGCACGAGAGTCTGATTTAGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR CAA 90 bp AATACCAATTCCATTTCCTCGTGTACCTCTTTGCAAATGTCGGACAAAGCAGAGCTACTTGTTGGTCTTTaGGGGCAGAAAACCCATAGG +
Preference number: 5 (lower is better)
Translates to: NTNSISSCTSLQMSDKAELLVGL*GQKTHR
Trigger: CCTATGGGTTTTCTGCCCCAAAAGACCAACAAGTAG...CTCTGCTTTGTCCGACATTTGCAAAGAGGTACACGAGGAAATGGAATTGGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR CAA 90 bp CCCCTAAATCAGACTCTCGTGCAGAGTCTGATTTATATTTTCATGACCTGTGGATACTGCTGTGACTACTaGTTGGTCTTTTGGGGCAGA +
Preference number: 5 (lower is better)
Translates to: PLNQTLVQSLIYIFMTCGYCCDY*LVFWGR
Trigger: TCTGCCCCAAAAGACCAACAAGTAGTCACAGCAGTA...TCCACAGGTCATGAAAATATAAATCAGACTCTGCACGAGAGTCTGATTTAGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR CAA 90 bp AACACAGACATGACTACTTGCTTGTTTTGTCTGTGGCTGCCTTTGTGCTACAATTACTGCTGTGACTACTaGTTGGTCTTTTGGGGCAGA +
Preference number: 5 (lower is better)
Translates to: NTDMTTCLFCLWLPLCYNYCCDY*LVFWGR
Trigger: TCTGCCCCAAAAGACCAACAAGTAGTCACAGCAGTA...ATTGTAGCACAAAGGCAGCCACAGACAAAACAAGCAAGTAGTCATGTCTGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR CAA 90 bp AATACCAATTCCATTTCCTCGTGTACCTCTTTGCAAATGTCGGACAAAGCAGAGATTGTGTATGAGCTGTaGGTGCTTTGGGAGCCAAGT +
Preference number: 5 (lower is better)
Translates to: NTNSISSCTSLQMSDKAEIVYEL*VLWEPS
Trigger: ACTTGGCTCCCAAAGCACCAACAGCTCATACACAAT...CTCTGCTTTGTCCGACATTTGCAAAGAGGTACACGAGGAAATGGAATTGGTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR CAA 90 bp GTGACCTTTTCATCCACATTTGCCCAGAAGAATAGGACATGCCCTAGCCATATTGTTGAGATCATCTACTaGCATTCGTTTCCCAGGACA +
Preference number: 5 (lower is better)
Translates to: VTFSSTFAQKNRTCPSHIVEIIY*HSFPRT
Trigger: TGTCCTGGGAAACGAATGCAAGTAGATGATCTCAAC...AATATGGCTAGGGCATGTCCTATTCTTCTGGGCAAATGTGGATGAAAAGGTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR CAA 90 bp AATACCAATTCCATTTCCTCGTGTACCTCTTTGCAAATGTCGGACAAAGCAGAGTTTTCGTTTGAGCCATaGCTCATGTGCCCACTGTGT +
Preference number: 5 (lower is better)
Translates to: NTNSISSCTSLQMSDKAEFSFEP*LMCPLC
Trigger: ACACAGTGGGCACATGAGCAATGGCTCAAACGAAAA...CTCTGCTTTGTCCGACATTTGCAAAGAGGTACACGAGGAAATGGAATTGGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR CAA 90 bp AATACCAATTCCATTTCCTCGTGTACCTCTTTGCAAATGTCGGACAAAGCAGAGAGATCCACTTTTCGTTaGAGCCATTGCTCATGTGCC +
Preference number: 5 (lower is better)
Translates to: NTNSISSCTSLQMSDKAERSTFR*SHCSCA
Trigger: GGCACATGAGCAATGGCTCAAACGAAAAGTGGATCT...CTCTGCTTTGTCCGACATTTGCAAAGAGGTACACGAGGAAATGGAATTGGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR CAA 90 bp AACACAGACATGACTACTTGCTTGTTTTGTCTGTGGCTGCCTTTGTGCTACAATAGATCCACTTTTCGTTaGAGCCATTGCTCATGTGCC +
Preference number: 5 (lower is better)
Translates to: NTDMTTCLFCLWLPLCYNRSTFR*SHCSCA
Trigger: GGCACATGAGCAATGGCTCAAACGAAAAGTGGATCT...ATTGTAGCACAAAGGCAGCCACAGACAAAACAAGCAAGTAGTCATGTCTGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR CAA 90 bp GTTGGACCCCCTAAATCAGACTCTCGTGCAGAGTCTGATTTATATTTTCATGACGATTTGCTTCGCCAATaGGGTAGAAAGAGCAGACTC +
Preference number: 5 (lower is better)
Translates to: VGPPKSDSRAESDLYFHDDLLRQ*GRKSRL
Trigger: GAGTCTGCTCTTTCTACCCAATTGGCGAAGCAAATC...GTCATGAAAATATAAATCAGACTCTGCACGAGAGTCTGATTTAGGGGGTCCAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR CAA 90 bp AATACCAATTCCATTTCCTCGTGTACCTCTTTGCAAATGTCGGACAAAGCAGAGGACTACTTGCTTGTTTaGTCTGTGGCTGCCTTTGTG +
Preference number: 5 (lower is better)
Translates to: NTNSISSCTSLQMSDKAEDYLLV*SVAAFV
Trigger: CACAAAGGCAGCCACAGACAAAACAAGCAAGTAGTC...CTCTGCTTTGTCCGACATTTGCAAAGAGGTACACGAGGAAATGGAATTGGTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR CAA 90 bp GTGACCTTTTCATCCACATTTGCCCAGAAGAATAGGACATGCCCTAGCCATATTGTCTTCTTTGGGGTTTaGCAGGCTAAAATAGCCTCT +
Preference number: 5 (lower is better)
Translates to: VTFSSTFAQKNRTCPSHIVFFGV*QAKIAS
Trigger: AGAGGCTATTTTAGCCTGCAAAACCCCAAAGAAGAC...AATATGGCTAGGGCATGTCCTATTCTTCTGGGCAAATGTGGATGAAAAGGTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000480456.6
CDS GCA 90 bp ATTGCAGAGTTCCAGTTTTTGTATTCATTGTGTATGAGCTGTTGGTaGTTTGGGAGCCAAGTCTGGGATTTTCTAGCAAACGGATGCCAT +
Preference number: 5 (lower is better)
Translates to: IAEFQFLYSLCMSCW*FGSQVWDFLANGCH
Trigger: ATGGCATCCGTTTGCTAGAAAATCCCAGACTTGGCTCCCAAAGCACCAACAGCTCATACACAATGAATACAAAAACTGGAACTCTGCAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312957.9
ENST00000400532.5
ENST00000460679.5
ENST00000480456.6
CDS CCA 90 bp AGAGTTCCAGTTTTTGTATTCATTGTGTATGAGCTGTTGGTGCTTTaGGAGCCAAGTCTGGGATTTTCTAGCAAACGGATGCCATCCTTA +
Preference number: 5 (lower is better)
Translates to: RVPVFVFIVYELLVL*EPSLGFSSKRMPSL
Trigger: TAAGGATGGCATCCGTTTGCTAGAAAATCCCAGACTTGGCTCCCAAAGCACCAACAGCTCATACACAATGAATACAAAAACTGGAACTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312957.9
ENST00000400532.5
ENST00000460679.5
ENST00000480456.6
CDS-3UTR CAA 90 bp GTTGGACCCCCTAAATCAGACTCTCGTGCAGAGTCTGATTTATATTTTCATGACTGCTGTGACTACTTGTaGGTCTTTTGGGGCAGAAAA +
Preference number: 5 (lower is better)
Translates to: VGPPKSDSRAESDLYFHDCCDYL*VFWGRK
Trigger: TTTTCTGCCCCAAAAGACCAACAAGTAGTCACAGCA...GTCATGAAAATATAAATCAGACTCTGCACGAGAGTCTGATTTAGGGGGTCCAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR CAA 90 bp AAATCATTTTCACTCATTGTCGTGGCTTTAGATGAAGAATTACTCTTCGAGACTATCCTCTTCCAGGTTTaGGCCTTGCTCAGATGGGGC +
Preference number: 5 (lower is better)
Translates to: KSFSLIVVALDEELLFETILFQV*ALLRWG
Trigger: GCCCCATCTGAGCAAGGCCAAAACCTGGAAGAGGAT...AGTCTCGAAGAGTAATTCTTCATCTAAAGCCACGACAATGAGTGAAAATGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460679.5
CDS-3UTR CAA 90 bp TTAGATGAAGAATTACTCTTCGAGACTGAGAGACCAGGATTGAGCCAGAAATCTATTGTGTATGAGCTGTaGGTGCTTTGGGAGCCAAGT +
Preference number: 5 (lower is better)
Translates to: LDEELLFETERPGLSQKSIVYEL*VLWEPS
Trigger: ACTTGGCTCCCAAAGCACCAACAGCTCATACACAAT...AGATTTCTGGCTCAATCCTGGTCTCTCAGTCTCGAAGAGTAATTCTTCATCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460679.5
CDS-3UTR CAA 90 bp GAAATGAGACCAGAGGTTCCTTTTGCATCTGTCAGAGTATTTGTTGGACCCCCTCAGTTTTTGTATTCATaGTGTATGAGCTGTTGGTGC +
Preference number: 5 (lower is better)
Translates to: EMRPEVPFASVRVFVGPPQFLYS*CMSCWC
Trigger: GCACCAACAGCTCATACACAATGAATACAAAAACTG...AGGGGGTCCAACAAATACTCTGACAGATGCAAAAGGAACCTCTGGTCTCATTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR CAA 90 bp CCCCTAAATCAGACTCTCGTGCAGAGTCTGATTTATATTTTCATGACCTGTGGACGATATCCAACAGAATaGCGGGCTTCACAGGAATAT +
Preference number: 5 (lower is better)
Translates to: PLNQTLVQSLIYIFMTCGRYPTE*RASQEY
Trigger: ATATTCCTGTGAAGCCCGCAATTCTGTTGGATATCG...TCCACAGGTCATGAAAATATAAATCAGACTCTGCACGAGAGTCTGATTTAGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR CAA 90 bp AACACAGACATGACTACTTGCTTGTTTTGTCTGTGGCTGCCTTTGTGCTACAATCTGTCAGAGTATTTGTaGGACCCCCTAAATCAGACT +
Preference number: 5 (lower is better)
Translates to: NTDMTTCLFCLWLPLCYNLSEYL*DPLNQT
Trigger: AGTCTGATTTAGGGGGTCCAACAAATACTCTGACAG...ATTGTAGCACAAAGGCAGCCACAGACAAAACAAGCAAGTAGTCATGTCTGTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR CAA 90 bp AACACAGACATGACTACTTGCTTGTTTTGTCTGTGGCTGCCTTTGTGCTACAATGACCAGAGGTTCCTTTaGCATCTGTCAGAGTATTTG +
Preference number: 5 (lower is better)
Translates to: NTDMTTCLFCLWLPLCYNDQRFL*HLSEYL
Trigger: CAAATACTCTGACAGATGCAAAAGGAACCTCTGGTC...ATTGTAGCACAAAGGCAGCCACAGACAAAACAAGCAAGTAGTCATGTCTGTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR CAA 90 bp GTGACCTTTTCATCCACATTTGCCCAGAAGAATAGGACATGCCCTAGCCATATTCCTTTTCATCCACATTaGCCCAGAAGAATAGGACAT +
Preference number: 5 (lower is better)
Translates to: VTFSSTFAQKNRTCPSHIPFHPH*PRRIGH
Trigger: ATGTCCTATTCTTCTGGGCAAATGTGGATGAAAAGG...AATATGGCTAGGGCATGTCCTATTCTTCTGGGCAAATGTGGATGAAAAGGTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR CAA 90 bp GTTGGACCCCCTAAATCAGACTCTCGTGCAGAGTCTGATTTATATTTTCATGACTCAATACTCTGCCCTTaGTGTGGGGGAAAACATTCT +
Preference number: 5 (lower is better)
Translates to: VGPPKSDSRAESDLYFHDSILCP*CGGKHS
Trigger: AGAATGTTTTCCCCCACACAAAGGGCAGAGTATTGA...GTCATGAAAATATAAATCAGACTCTGCACGAGAGTCTGATTTAGGGGGTCCAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR CAA 90 bp CTCATTGTCGTGGCTTTAGATGAAGAATTACTCTTCGAGACTGAGAGACCAGGACAGTTTTTGTATTCATaGTGTATGAGCTGTTGGTGC +
Preference number: 5 (lower is better)
Translates to: LIVVALDEELLFETERPGQFLYS*CMSCWC
Trigger: GCACCAACAGCTCATACACAATGAATACAAAAACTG...TCCTGGTCTCTCAGTCTCGAAGAGTAATTCTTCATCTAAAGCCACGACAATGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460679.5
CDS-3UTR CAA 90 bp GTGACCTTTTCATCCACATTTGCCCAGAAGAATAGGACATGCCCTAGCCATATTCAGTTTTTGTATTCATaGTGTATGAGCTGTTGGTGC +
Preference number: 5 (lower is better)
Translates to: VTFSSTFAQKNRTCPSHIQFLYS*CMSCWC
Trigger: GCACCAACAGCTCATACACAATGAATACAAAAACTG...AATATGGCTAGGGCATGTCCTATTCTTCTGGGCAAATGTGGATGAAAAGGTCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR CAA 90 bp GTGACCTTTTCATCCACATTTGCCCAGAAGAATAGGACATGCCCTAGCCATATTGCAGAGTTCCAGTTTTaGTATTCATTGTGTATGAGC +
Preference number: 5 (lower is better)
Translates to: VTFSSTFAQKNRTCPSHIAEFQF*YSLCMS
Trigger: GCTCATACACAATGAATACAAAAACTGGAACTCTGC...AATATGGCTAGGGCATGTCCTATTCTTCTGGGCAAATGTGGATGAAAAGGTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR CAA 90 bp GAAATGAGACCAGAGGTTCCTTTTGCATCTGTCAGAGTATTTGTTGGACCCCCTATGATGCCACTTATGTaGAGATCATCTACTTGCATT +
Preference number: 5 (lower is better)
Translates to: EMRPEVPFASVRVFVGPPMMPLM*RSSTCI
Trigger: AATGCAAGTAGATGATCTCAACATAAGTGGCATCAT...AGGGGGTCCAACAAATACTCTGACAGATGCAAAAGGAACCTCTGGTCTCATTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR CAA 90 bp AATACCAATTCCATTTCCTCGTGTACCTCTTTGCAAATGTCGGACAAAGCAGAGGGAAGGAGGTTTCTTTaGAAAAGTAGCCTTTCCTCT +
Preference number: 5 (lower is better)
Translates to: NTNSISSCTSLQMSDKAEGRRFL*KSSLSS
Trigger: AGAGGAAAGGCTACTTTTCAAAAGAAACCTCCTTCC...CTCTGCTTTGTCCGACATTTGCAAAGAGGTACACGAGGAAATGGAATTGGTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR CAA 90 bp AGGAAAGCATTCCTCAAACCAAAGAAATCTTCCAACCAAAACATAGGTAACATTTGTCTGTGGCTGCCTTaGTGCTACAATGGCAGAGTC +
Preference number: 5 (lower is better)
Translates to: RKAFLKPKKSSNQNIGNICLWLP*CYNGRV
Trigger: GACTCTGCCATTGTAGCACAAAGGCAGCCACAGACA...AATGTTACCTATGTTTTGGTTGGAAGATTTCTTTGGTTTGAGGAATGCTTTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR CAA 90 bp GTTGGACCCCCTAAATCAGACTCTCGTGCAGAGTCTGATTTATATTTTCATGACAGGAAACAGTCTTCTTaGGGGTTTTGCAGGCTAAAA +
Preference number: 5 (lower is better)
Translates to: VGPPKSDSRAESDLYFHDRKQSS*GFCRLK
Trigger: TTTTAGCCTGCAAAACCCCAAAGAAGACTGTTTCCT...GTCATGAAAATATAAATCAGACTCTGCACGAGAGTCTGATTTAGGGGGTCCAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000480456.6
CDS-3UTR CAA 90 bp AATACCAATTCCATTTCCTCGTGTACCTCTTTGCAAATGTCGGACAAAGCAGAGGCAGAGTTCCAGTTTTaGTATTCATTGTGTATGAGC +
Preference number: 5 (lower is better)
Translates to: NTNSISSCTSLQMSDKAEAEFQF*YSLCMS
Trigger: GCTCATACACAATGAATACAAAAACTGGAACTCTGC...CTCTGCTTTGTCCGACATTTGCAAAGAGGTACACGAGGAAATGGAATTGGTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR CAA 90 bp AGGAAAGCATTCCTCAAACCAAAGAAATCTTCCAACCAAAACATAGGTAACATTGGGTGCTTAATCCATTaGTTCGGTGAATCCTGGGGA +
Preference number: 5 (lower is better)
Translates to: RKAFLKPKKSSNQNIGNIGCLIH*FGESWG
Trigger: TCCCCAGGATTCACCGAACAAATGGATTAAGCACCC...AATGTTACCTATGTTTTGGTTGGAAGATTTCTTTGGTTTGAGGAATGCTTTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR CAA 90 bp AGGAAAGCATTCCTCAAACCAAAGAAATCTTCCAACCAAAACATAGGTAACATTCCTGTGGGCCAAATCTaGTCTGTGCCTGCTGTTTTT +
Preference number: 5 (lower is better)
Translates to: RKAFLKPKKSSNQNIGNIPVGQI*SVPAVF
Trigger: AAAAACAGCAGGCACAGACAAGATTTGGCCCACAGG...AATGTTACCTATGTTTTGGTTGGAAGATTTCTTTGGTTTGAGGAATGCTTTCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR CAA 90 bp ATGGCAGATGATTCTTCAAAGGAATTAGGAGATGACAAACTGTCTGAAGCCATGAGGAAACAGTCTTCTTaGGGGTTTTGCAGGCTAAAA +
Preference number: 5 (lower is better)
Translates to: MADDSSKELGDDKLSEAMRKQSS*GFCRLK
Trigger: TTTTAGCCTGCAAAACCCCAAAGAAGACTGTTTCCT...CATGGCTTCAGACAGTTTGTCATCTCCTAATTCCTTTGAAGAATCATCTGCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460679.5
CDS-3UTR CAA 90 bp AAATCATTTTCACTCATTGTCGTGGCTTTAGATGAAGAATTACTCTTCGAGACTACTGAGAGACCAGGATaGAGCCAGAAATCTGGGAAC +
Preference number: 5 (lower is better)
Translates to: KSFSLIVVALDEELLFETTERPG*SQKSGN
Trigger: GTTCCCAGATTTCTGGCTCAATCCTGGTCTCTCAGT...AGTCTCGAAGAGTAATTCTTCATCTAAAGCCACGACAATGAGTGAAAATGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460679.5
CDS-3UTR CAA 90 bp GTTGGACCCCCTAAATCAGACTCTCGTGCAGAGTCTGATTTATATTTTCATGACATTTTTAAAATCACCTaGGTACTCTACTGCTGTGAC +
Preference number: 5 (lower is better)
Translates to: VGPPKSDSRAESDLYFHDIFKIT*VLYCCD
Trigger: GTCACAGCAGTAGAGTACCAAGGTGATTTTAAAAAT...GTCATGAAAATATAAATCAGACTCTGCACGAGAGTCTGATTTAGGGGGTCCAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000312957.9
CDS-3UTR CAA 90 bp TTAGATGAAGAATTACTCTTCGAGACTGAGAGACCAGGATTGAGCCAGAAATCTGCAGAGTTCCAGTTTTaGTATTCATTGTGTATGAGC +
Preference number: 5 (lower is better)
Translates to: LDEELLFETERPGLSQKSAEFQF*YSLCMS
Trigger: GCTCATACACAATGAATACAAAAACTGGAACTCTGC...AGATTTCTGGCTCAATCCTGGTCTCTCAGTCTCGAAGAGTAATTCTTCATCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460679.5
CDS-3UTR CAA 90 bp CCCCTAAATCAGACTCTCGTGCAGAGTCTGATTTATATTTTCATGACCTGTGGAGCATTTCTTTTGATGTaGCTTTTAGTTCCCAGGAAT +
Preference number: 5 (lower is better)
Translates to: PLNQTLVQSLIYIFMTCGAFLLM*LLVPRN
Trigger: ATTCCTGGGAACTAAAAGCAACATCAAAAGAAATGC...TCCACAGGTCATGAAAATATAAATCAGACTCTGCACGAGAGTCTGATTTAGGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR CAA 90 bp CCCCTAAATCAGACTCTCGTGCAGAGTCTGATTTATATTTTCATGACCTGTGGATTTAAACTGAAGAAGTaGATCTTGTGTGATGACAGG +
Preference number: 5 (lower is better)
Translates to: PLNQTLVQSLIYIFMTCGFKLKK*ILCDDR
Trigger: CCTGTCATCACACAAGATCAACTTCTTCAGTTTAAA...TCCACAGGTCATGAAAATATAAATCAGACTCTGCACGAGAGTCTGATTTAGGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR CAA 90 bp AACACAGACATGACTACTTGCTTGTTTTGTCTGTGGCTGCCTTTGTGCTACAATTTTAAACTGAAGAAGTaGATCTTGTGTGATGACAGG +
Preference number: 5 (lower is better)
Translates to: NTDMTTCLFCLWLPLCYNFKLKK*ILCDDR
Trigger: CCTGTCATCACACAAGATCAACTTCTTCAGTTTAAA...ATTGTAGCACAAAGGCAGCCACAGACAAAACAAGCAAGTAGTCATGTCTGTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR CAA 90 bp AGGAAAGCATTCCTCAAACCAAAGAAATCTTCCAACCAAAACATAGGTAACATTCGATATCCAACAGAATaGCGGGCTTCACAGGAATAT +
Preference number: 5 (lower is better)
Translates to: RKAFLKPKKSSNQNIGNIRYPTE*RASQEY
Trigger: ATATTCCTGTGAAGCCCGCAATTCTGTTGGATATCG...AATGTTACCTATGTTTTGGTTGGAAGATTTCTTTGGTTTGAGGAATGCTTTCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR CAA 90 bp AAATCATTTTCACTCATTGTCGTGGCTTTAGATGAAGAATTACTCTTCGAGACTCGATATCCAACAGAATaGCGGGCTTCACAGGAATAT +
Preference number: 5 (lower is better)
Translates to: KSFSLIVVALDEELLFETRYPTE*RASQEY
Trigger: ATATTCCTGTGAAGCCCGCAATTCTGTTGGATATCG...AGTCTCGAAGAGTAATTCTTCATCTAAAGCCACGACAATGAGTGAAAATGATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460679.5
CDS-3UTR CAA 90 bp TTGAAATCATTTTCACTCATTGTCGTGGCTTTAGATGAAGAATTACTCTTCGAGGTTGAGATCATCTACTaGCATTCGTTTCCCAGGACA +
Preference number: 5 (lower is better)
Translates to: LKSFSLIVVALDEELLFEVEIIY*HSFPRT
Trigger: TGTCCTGGGAAACGAATGCAAGTAGATGATCTCAAC...CTCGAAGAGTAATTCTTCATCTAAAGCCACGACAATGAGTGAAAATGATTTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460679.5
CDS-3UTR CAA 90 bp TTAGATGAAGAATTACTCTTCGAGACTGAGAGACCAGGATTGAGCCAGAAATCTATGATGCCACTTATGTaGAGATCATCTACTTGCATT +
Preference number: 5 (lower is better)
Translates to: LDEELLFETERPGLSQKSMMPLM*RSSTCI
Trigger: AATGCAAGTAGATGATCTCAACATAAGTGGCATCAT...AGATTTCTGGCTCAATCCTGGTCTCTCAGTCTCGAAGAGTAATTCTTCATCTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460679.5
CDS-3UTR CAA 90 bp AGGAAAGCATTCCTCAAACCAAAGAAATCTTCCAACCAAAACATAGGTAACATTCTGTCAGAGTATTTGTaGGACCCCCTAAATCAGACT +
Preference number: 5 (lower is better)
Translates to: RKAFLKPKKSSNQNIGNILSEYL*DPLNQT
Trigger: AGTCTGATTTAGGGGGTCCAACAAATACTCTGACAG...AATGTTACCTATGTTTTGGTTGGAAGATTTCTTTGGTTTGAGGAATGCTTTCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR CAA 90 bp TGCTTGAAATCATTTTCACTCATTGTCGTGGCTTTAGATGAAGAATTACTCTTCGGAAGGAGGTTTCTTTaGAAAAGTAGCCTTTCCTCT +
Preference number: 5 (lower is better)
Translates to: CLKSFSLIVVALDEELLFGRRFL*KSSLSS
Trigger: AGAGGAAAGGCTACTTTTCAAAAGAAACCTCCTTCC...GAAGAGTAATTCTTCATCTAAAGCCACGACAATGAGTGAAAATGATTTCAAGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460679.5
CDS-3UTR CAA 90 bp AGGAAAGCATTCCTCAAACCAAAGAAATCTTCCAACCAAAACATAGGTAACATTGGAAGGAGGTTTCTTTaGAAAAGTAGCCTTTCCTCT +
Preference number: 5 (lower is better)
Translates to: RKAFLKPKKSSNQNIGNIGRRFL*KSSLSS
Trigger: AGAGGAAAGGCTACTTTTCAAAAGAAACCTCCTTCC...AATGTTACCTATGTTTTGGTTGGAAGATTTCTTTGGTTTGAGGAATGCTTTCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR CAA 90 bp AGGAAAGCATTCCTCAAACCAAAGAAATCTTCCAACCAAAACATAGGTAACATTTCTCCAGTGTCCAGTTaGGAAACAGTATTAAATTGC +
Preference number: 5 (lower is better)
Translates to: RKAFLKPKKSSNQNIGNISPVSS*ETVLNC
Trigger: GCAATTTAATACTGTTTCCAAACTGGACACTGGAGA...AATGTTACCTATGTTTTGGTTGGAAGATTTCTTTGGTTTGAGGAATGCTTTCCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR CAA 90 bp TGCTTGAAATCATTTTCACTCATTGTCGTGGCTTTAGATGAAGAATTACTCTTCTCTCCAGTGTCCAGTTaGGAAACAGTATTAAATTGC +
Preference number: 5 (lower is better)
Translates to: CLKSFSLIVVALDEELLFSPVSS*ETVLNC
Trigger: GCAATTTAATACTGTTTCCAAACTGGACACTGGAGA...GAAGAGTAATTCTTCATCTAAAGCCACGACAATGAGTGAAAATGATTTCAAGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460679.5
CDS-3UTR CAA 90 bp AGGAAAGCATTCCTCAAACCAAAGAAATCTTCCAACCAAAACATAGGTAACATTTTCATGACCTGTGGATaGACTTCACAATCAGTATGT +
Preference number: 5 (lower is better)
Translates to: RKAFLKPKKSSNQNIGNIFMTCG*TSQSVC
Trigger: ACATACTGATTGTGAAGTCAATCCACAGGTCATGAA...AATGTTACCTATGTTTTGGTTGGAAGATTTCTTTGGTTTGAGGAATGCTTTCCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312957.9
ENST00000480456.6
CDS-3UTR CAA 90 bp TTGAAATCATTTTCACTCATTGTCGTGGCTTTAGATGAAGAATTACTCTTCGAGATAGCCTCAGATAGTTaGTCATCCATCTTCTCTCTA +
Preference number: 5 (lower is better)
Translates to: LKSFSLIVVALDEELLFEIASDS*SSIFSL
Trigger: TAGAGAGAAGATGGATGACAAACTATCTGAGGCTAT...CTCGAAGAGTAATTCTTCATCTAAAGCCACGACAATGAGTGAAAATGATTTCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460679.5
CDS GCA 72 bp GCTCCTCCTCGCCATCTTCCCGGGGCGGCAGCCGGCTaGTCTGAGGAGGTCGAGGGTCCCGGCGGCAGGAGC +
Preference number: 6 (lower is better)
Translates to: APPRHLPGAAAG*SEEVEGPGGRS
Trigger: GCTCCTGCCGCCGGGACCCTCGACCTCCTCAGAGCAGCCGGCTGCCGCCCCGGGAAGATGGCGAGGAGGAGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312957.9
ENST00000400532.5
ENST00000480456.6
CDS CAA 72 bp CCGGCGGGTCGTCCCTCCGCCCCCACGCCTCCGGGATaGATCGGCTTTGTGTCTGGTCCGCGCGGGGCTGCC +
Preference number: 6 (lower is better)
Translates to: PAGRPSAPTPPG*IGFVSGPRGAA
Trigger: GGCAGCCCCGCGCGGACCAGACACAAAGCCGATCAATCCCGGAGGCGTGGGGGCGGAGGGACGACCCGCCGG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312957.9
ENST00000400532.5
ENST00000480456.6
CDS TCA 72 bp CGGCGGGTCGTCCCTCCGCCCCCACGCCTCCGGGATTaGTCGGCTTTGTGTCTGGTCCGCGCGGGGCTGCCA +
Preference number: 6 (lower is better)
Translates to: RRVVPPPPRLRD*SALCLVRAGLP
Trigger: TGGCAGCCCCGCGCGGACCAGACACAAAGCCGATCAATCCCGGAGGCGTGGGGGCGGAGGGACGACCCGCCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312957.9
ENST00000400532.5
ENST00000480456.6
CDS GCA 72 bp AAGTATGTGGCACCTCCCCAACCTTGCTCCTGCTTTTaGCATGTGACGTGCCTGCTCCCGCTTTGCCTTCAG +
Preference number: 6 (lower is better)
Translates to: KYVAPPQPCSCF*HVTCLLPLCLQ
Trigger: CTGAAGGCAAAGCGGGAGCAGGCACGTCACATGGCAAAAGCAGGAGCAAGGTTGGGGAGGTGCCACATACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492962.1
CDS CCA 72 bp AAGCTTCCTGAGGCCTCCCCAAAAGCCAAGCAGTGTTaGTGCCAGGATTGTACAGCTTGCAGAACCGTGAGC +
Preference number: 6 (lower is better)
Translates to: KLPEASPKAKQC*CQDCTACRTVS
Trigger: GCTCACGGTTCTGCAAGCTGTACAATCCTGGCACCAACACTGCTTGGCTTTTGGGGAGGCCTCAGGAAGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492962.1
CDS CAA 72 bp CTCCTGCTTTTGCCATGTGACGTGCCTGCTCCCGCTTaGCCTTCAGCCATGAGTAAAAAGCTTCCTGAGGCC +
Preference number: 6 (lower is better)
Translates to: LLLLPCDVPAPA*PSAMSKKLPEA
Trigger: GGCCTCAGGAAGCTTTTTACTCATGGCTGAAGGCAAAGCGGGAGCAGGCACGTCACATGGCAAAAGCAGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000492962.1
CDS CAA 90 bp GGTTGTTTAAAAGTATGTGGCACCTCCCCAACCTTGCTCCTGCTTTaGCCATGTGACGTGCCTGCTCCCGCTTTGCCTTCAGCCATGAGT +
Preference number: 6 (lower is better)
Translates to: GCLKVCGTSPTLLLL*PCDVPAPALPSAMS
Trigger: ACTCATGGCTGAAGGCAAAGCGGGAGCAGGCACGTCACATGGCAAAAGCAGGAGCAAGGTTGGGGAGGTGCCACATACTTTTAAACAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492962.1
CDS CCA 72 bp GACTGTATCCTCTTCCAGGTTTTGGCCTTGCTCAGATaGGGCACTAACTTCACAACGATATTTCCCCGCATC +
Preference number: 6 (lower is better)
Translates to: DCILFQVLALLR*GTNFTTIFPRI
Trigger: GATGCGGGGAAATATCGTTGTGAAGTTAGTGCCCCATCTGAGCAAGGCCAAAACCTGGAAGAGGATACAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312957.9
ENST00000400532.5
ENST00000460679.5
ENST00000480456.6
CDS CCA 72 bp AGGAGACACTCCGACCCAGTTTCTTCCACTCTAATCTaGAGGAAACAGTCTTCTTTGGGGTTTTGCAGGCTA +
Preference number: 6 (lower is better)
Translates to: RRHSDPVSSTLI*RKQSSLGFCRL
Trigger: TAGCCTGCAAAACCCCAAAGAAGACTGTTTCCTCCAGATTAGAGTGGAAGAAACTGGGTCGGAGTGTCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400532.5
ENST00000460679.5
ENST00000480456.6
CDS CAA 72 bp ATTCGTTTCCCAGGACACCTGCGATATCCAACAGAATaGCGGGCTTCACAGGAATATTCTCCAGTGTCCAGT +
Preference number: 6 (lower is better)
Translates to: IRFPGHLRYPTE*RASQEYSPVSS
Trigger: ACTGGACACTGGAGAATATTCCTGTGAAGCCCGCAATTCTGTTGGATATCGCAGGTGTCCTGGGAAACGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312957.9
ENST00000400532.5
ENST00000460679.5
ENST00000480456.6
ENST00000492962.1
CDS CAA 90 bp TCTACTTGCATTCGTTTCCCAGGACACCTGCGATATCCAACAGAATaGCGGGCTTCACAGGAATATTCTCCAGTGTCCAGTTTGGAAACA +
Preference number: 6 (lower is better)
Translates to: STCIRFPGHLRYPTE*RASQEYSPVSSLET
Trigger: TGTTTCCAAACTGGACACTGGAGAATATTCCTGTGAAGCCCGCAATTCTGTTGGATATCGCAGGTGTCCTGGGAAACGAATGCAAGTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312957.9
ENST00000400532.5
ENST00000460679.5
ENST00000480456.6
ENST00000492962.1
CDS TCA 72 bp CATGTGTATTCAGGAGCTGGATTCCCTTCTTTGTCTTaGCATCGTAGCTCTACCACAGTTCCACTCAGAGCA +
Preference number: 6 (lower is better)
Translates to: HVYSGAGFPSLS*HRSSTTVPLRA
Trigger: TGCTCTGAGTGGAACTGTGGTAGAGCTACGATGTCAAGACAAAGAAGGGAATCCAGCTCCTGAATACACATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312957.9
ENST00000400532.5
ENST00000460679.5
ENST00000480456.6
CDS CCA 72 bp TTGGTACTCTACTGCTGTGACTACTTGTTGGTCTTTTaGGGCAGAAAACCCATAGGCCTTATGATAGCCCAG +
Preference number: 6 (lower is better)
Translates to: LVLYCCDYLLVF*GRKPIGLMIAQ
Trigger: CTGGGCTATCATAAGGCCTATGGGTTTTCTGCCCCAAAAGACCAACAAGTAGTCACAGCAGTAGAGTACCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312957.9
ENST00000400532.5
ENST00000480456.6
CDS CCA 72 bp AATACTTCCAGAGTGACTGTATCCTCTTCCAGGTTTTaGCCTTGCTCAGATGGGGCACTAACTTCACAACGA +
Preference number: 6 (lower is better)
Translates to: NTSRVTVSSSRF*PCSDGALTSQR
Trigger: TCGTTGTGAAGTTAGTGCCCCATCTGAGCAAGGCCAAAACCTGGAAGAGGATACAGTCACTCTGGAAGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312957.9
ENST00000400532.5
ENST00000460679.5
ENST00000480456.6
CDS CAA 90 bp GGGATGTTGATAGAGTCTGGATATTTGCCTTGCCCAAATCTTATGTaGAATTGTAATCCCCAATGTTGGAGGTGGGGTTTGTTGGAGCCG +
Preference number: 6 (lower is better)
Translates to: GMLIESGYLPCPNLM*NCNPQCWRWGLLEP
Trigger: CGGCTCCAACAAACCCCACCTCCAACATTGGGGATTACAATTCAACATAAGATTTGGGCAAGGCAAATATCCAGACTCTATCAACATCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492962.1
CDS CCA 72 bp TGCCCAAATCTTATGTTGAATTGTAATCCCCAATGTTaGAGGTGGGGTTTGTTGGAGCCGATTAAATCATGG +
Preference number: 6 (lower is better)
Translates to: CPNLMLNCNPQC*RWGLLEPIKSW
Trigger: CCATGATTTAATCGGCTCCAACAAACCCCACCTCCAACATTGGGGATTACAATTCAACATAAGATTTGGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492962.1
CDS CAA 72 bp AGAGTTCCAGTTTTTGTATTCATTGTGTATGAGCTGTaGGTGCTTTGGGAGCCAAGTCTGGGATTTTCTAGC +
Preference number: 6 (lower is better)
Translates to: RVPVFVFIVYEL*VLWEPSLGFSS
Trigger: GCTAGAAAATCCCAGACTTGGCTCCCAAAGCACCAACAGCTCATACACAATGAATACAAAAACTGGAACTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312957.9
ENST00000400532.5
ENST00000460679.5
ENST00000480456.6
CDS GCA 72 bp TTCCAGTTTTTGTATTCATTGTGTATGAGCTGTTGGTaGTTTGGGAGCCAAGTCTGGGATTTTCTAGCAAAC +
Preference number: 6 (lower is better)
Translates to: FQFLYSLCMSCW*FGSQVWDFLAN
Trigger: GTTTGCTAGAAAATCCCAGACTTGGCTCCCAAAGCACCAACAGCTCATACACAATGAATACAAAAACTGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312957.9
ENST00000400532.5
ENST00000460679.5
ENST00000480456.6
CDS CAA 90 bp TTAAATTGCAGAGTTCCAGTTTTTGTATTCATTGTGTATGAGCTGTaGGTGCTTTGGGAGCCAAGTCTGGGATTTTCTAGCAAACGGATG +
Preference number: 6 (lower is better)
Translates to: LNCRVPVFVFIVYEL*VLWEPSLGFSSKRM
Trigger: CATCCGTTTGCTAGAAAATCCCAGACTTGGCTCCCAAAGCACCAACAGCTCATACACAATGAATACAAAAACTGGAACTCTGCAATTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312957.9
ENST00000400532.5
ENST00000460679.5
ENST00000480456.6
CDS CAA 72 bp TTGCGGGCTTCACAGGAATATTCTCCAGTGTCCAGTTaGGAAACAGTATTAAATTGCAGAGTTCCAGTTTTT +
Preference number: 6 (lower is better)
Translates to: LRASQEYSPVSS*ETVLNCRVPVF
Trigger: AAAAACTGGAACTCTGCAATTTAATACTGTTTCCAAACTGGACACTGGAGAATATTCCTGTGAAGCCCGCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312957.9
ENST00000400532.5
ENST00000460679.5
ENST00000480456.6
CDS TCA 72 bp CTTGAAATCATTTTCACTCATTGTCGTGGCTTTAGATaGAGAATTACTCTTCCAGGATTGAGCCAGAAATCT +
Preference number: 6 (lower is better)
Translates to: LEIIFTHCRGFR*RITLPGLSQKS
Trigger: AGATTTCTGGCTCAATCCTGGAAGAGTAATTCTTCATCTAAAGCCACGACAATGAGTGAAAATGATTTCAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477351.1