RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for JAKMIP2 (Homo sapiens)

Ensembl gene IDs: ENSG00000176049

Ensembl transcript IDs: ENST00000265272.9, ENST00000333010.6, ENST00000504845.1, ENST00000507343.1, ENST00000507386.5, ENST00000616793.5

Found 840 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ACCCGGAAGAATGCTGTTCTGACTGCTACAAACTCAGTAGCCAAATaGATCTCGGTAGTACAGATGCAGAAGTGGGGCCACAGGAAATCT +
Preference number: 1 (lower is better)
Translates to: TRKNAVLTATNSVAK*ISVVQMQKWGHRKS
Trigger: AGATTTCCTGTGGCCCCACTTCTGCATCTGTACTACCGAGATGCATTTGGCTACTGAGTTTGTAGCAGTCAGAACAGCATTCTTCCGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616793.5
3UTR GCA 90 bp GGCTCTCCTGTGGTAAAAGTGGGGTTCTGTATGATGGCATGCATATaGAATCAAGAGAGCTGGGAGATGCTTATCATAGAAATGACACAC +
Preference number: 1 (lower is better)
Translates to: GSPVVKVGFCMMACI*NQESWEMLIIEMTH
Trigger: GTGTGTCATTTCTATGATAAGCATCTCCCAGCTCTCTTGATTGCATATGCATGCCATCATACAGAACCCCACTTTTACCACAGGAGAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
3UTR GCA 90 bp ATGACTGGCTCTCCTGTGGTAAAAGTGGGGTTCTGTATGATGGCATaGATATGCAATCAAGAGAGCTGGGAGATGCTTATCATAGAAATG +
Preference number: 1 (lower is better)
Translates to: MTGSPVVKVGFCMMA*ICNQESWEMLIIEM
Trigger: CATTTCTATGATAAGCATCTCCCAGCTCTCTTGATTGCATATGCATGCCATCATACAGAACCCCACTTTTACCACAGGAGAGCCAGTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
3UTR TCA 90 bp ATCGAATCTGCTTTTATTTCACATGTCACATTCGCTCGGGTCCTTTaGCTTCGTTACCAGTTTTGTTGTGGTCACTGTGATCCACTTCTC +
Preference number: 1 (lower is better)
Translates to: IESAFISHVTFARVL*LRYQFCCGHCDPLL
Trigger: GAGAAGTGGATCACAGTGACCACAACAAAACTGGTAACGAAGTCAAAGGACCCGAGCGAATGTGACATGTGAAATAAAAGCAGATTCGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
3UTR TCA 90 bp TTGTGGGAAGTTGCTATGGTTAATGGCTGGTATAGGCACAGTCTGTaGGATGTCAGTCAAATAGAAGTGTTGTTACTAACAGATGCTGGG +
Preference number: 1 (lower is better)
Translates to: LWEVAMVNGWYRHSL*DVSQIEVLLLTDAG
Trigger: CCCAGCATCTGTTAGTAACAACACTTCTATTTGACTGACATCTCACAGACTGTGCCTATACCAGCCATTAACCATAGCAACTTCCCACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616793.5
3UTR GCA 90 bp TTTGCTGGTTTATGGGCCTGGATAATTGAAAAACCGAGTGGTCTCTaGCTCAGTCAACAATTGGAAATAATAGTAGTGAACAGAAGGTGG +
Preference number: 1 (lower is better)
Translates to: FAGLWAWIIEKPSGL*LSQQLEIIVVNRRW
Trigger: CCACCTTCTGTTCACTACTATTATTTCCAATTGTTGACTGAGGCAGAGACCACTCGGTTTTTCAATTATCCAGGCCCATAAACCAGCAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616793.5
3UTR CCA 90 bp ATATGTGAGAGTAATTTATCCTCTTCCATATTTTCTGACTCAAGTTaGCTAGTGTTGGGTCACCAACACTGTAGAGGCACCCTCTTTCAC +
Preference number: 1 (lower is better)
Translates to: ICESNLSSSIFSDSS*LVLGHQHCRGTLFH
Trigger: GTGAAAGAGGGTGCCTCTACAGTGTTGGTGACCCAACACTAGCCAACTTGAGTCAGAAAATATGGAAGAGGATAAATTACTCTCACATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
3UTR CCA 90 bp AAAGTGGGGTTCTGTATGATGGCATGCATATGCAATCAAGAGAGCTaGGAGATGCTTATCATAGAAATGACACACTCTTCTATCTTGTTC +
Preference number: 1 (lower is better)
Translates to: KVGFCMMACICNQES*EMLIIEMTHSSILF
Trigger: GAACAAGATAGAAGAGTGTGTCATTTCTATGATAAGCATCTCCCAGCTCTCTTGATTGCATATGCATGCCATCATACAGAACCCCACTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
3UTR GCA 90 bp TTGAGAAAAATTAAGTTAATGAACCCGGAAGAATGCTGTTCTGACTaGTACAAACTCAGTAGCCAAATGCATCTCGGTAGTACAGATGCA +
Preference number: 1 (lower is better)
Translates to: LRKIKLMNPEECCSD*YKLSSQMHLGSTDA
Trigger: TGCATCTGTACTACCGAGATGCATTTGGCTACTGAGTTTGTAGCAGTCAGAACAGCATTCTTCCGGGTTCATTAACTTAATTTTTCTCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616793.5
3UTR CCA 90 bp ATCCACTCTTTAGTAAGTTCGTGGGATCTTGATTGTGGGCAAAATTaGGCTCAAAGTTGTTTAACTTTACCATTCTCACCCTACAGAACT +
Preference number: 1 (lower is better)
Translates to: IHSLVSSWDLDCGQN*AQSCLTLPFSPYRT
Trigger: AGTTCTGTAGGGTGAGAATGGTAAAGTTAAACAACTTTGAGCCCAATTTTGCCCACAATCAAGATCCCACGAACTTACTAAAGAGTGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616793.5
3UTR TCA 90 bp GTTGGAAAATTGCATCATCCACTCTTTAGTAAGTTCGTGGGATCTTaGTTGTGGGCAAAATTGGGCTCAAAGTTGTTTAACTTTACCATT +
Preference number: 1 (lower is better)
Translates to: VGKLHHPLFSKFVGS*LWAKLGSKLFNFTI
Trigger: AATGGTAAAGTTAAACAACTTTGAGCCCAATTTTGCCCACAATCAAGATCCCACGAACTTACTAAAGAGTGGATGATGCAATTTTCCAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616793.5
3UTR CCA 90 bp TATGTATTCAAACACATTAGCTCTATACTTGAGTCCCCAAAGTATTaGATCTTGAAGGCTAAAACATGCATGAACCCTGTTGAGATGGAA +
Preference number: 1 (lower is better)
Translates to: YVFKHISSILESPKY*ILKAKTCMNPVEME
Trigger: TTCCATCTCAACAGGGTTCATGCATGTTTTAGCCTTCAAGATCCAATACTTTGGGGACTCAAGTATAGAGCTAATGTGTTTGAATACATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616793.5
3UTR TCA 90 bp ACATCTAAAGCTGCTTGGACAATCATCCTAGCTGTTGTTCTCATATaGCTTATAGCAGATAAGCAGATTAGGTATATAAACCATACCACT +
Preference number: 1 (lower is better)
Translates to: TSKAAWTIILAVVLI*LIADKQIRYINHTT
Trigger: AGTGGTATGGTTTATATACCTAATCTGCTTATCTGCTATAAGTCATATGAGAACAACAGCTAGGATGATTGTCCAAGCAGCTTTAGATGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
3UTR-3UTR GCA 90 bp TGTTGCCCAGGCCGTTATGAAACTCCTGGGCCCAAGCTATCCTGCCACCTTAGCCATAGGTATTCCTCGTaGTTCACTCCCCACCCACCC +
Preference number: 2 (lower is better)
Translates to: CCPGRYETPGPKLSCHLSHRYSS*FTPHPP
Trigger: GGGTGGGTGGGGAGTGAAGCACGAGGAATACCTATG...GCTAAGGTGGCAGGATAGCTTGGGCCCAGGAGTTTCATAACGGCCTGGGCAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616793.5
3UTR-3UTR TCA 90 bp TGTTGCCCAGGCCGTTATGAAACTCCTGGGCCCAAGCTATCCTGCCACCTTAGCGACAGCAAAGGATTGTaGATCTGCCCTGCCCCATTC +
Preference number: 2 (lower is better)
Translates to: CCPGRYETPGPKLSCHLSDSKGL*ICPAPF
Trigger: GAATGGGGCAGGGCAGATTCACAATCCTTTGCTGTC...GCTAAGGTGGCAGGATAGCTTGGGCCCAGGAGTTTCATAACGGCCTGGGCAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616793.5
3UTR-3UTR CCA 90 bp TGTTGCCCAGGCCGTTATGAAACTCCTGGGCCCAAGCTATCCTGCCACCTTAGCGGCTTGGGTCCATATTaGAAGCATAAACTCATGACA +
Preference number: 2 (lower is better)
Translates to: CCPGRYETPGPKLSCHLSGLGPY*KHKLMT
Trigger: TGTCATGAGTTTATGCTTCCAATATGGACCCAAGCC...GCTAAGGTGGCAGGATAGCTTGGGCCCAGGAGTTTCATAACGGCCTGGGCAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616793.5
3UTR-3UTR TCA 90 bp TGTTGCCCAGGCCGTTATGAAACTCCTGGGCCCAAGCTATCCTGCCACCTTAGCTGCCCTGCCCCATTCTaGAATGGAATAATAGAATTT +
Preference number: 2 (lower is better)
Translates to: CCPGRYETPGPKLSCHLSCPAPF*NGIIEF
Trigger: AAATTCTATTATTCCATTTCAGAATGGGGCAGGGCA...GCTAAGGTGGCAGGATAGCTTGGGCCCAGGAGTTTCATAACGGCCTGGGCAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616793.5
3UTR-3UTR GCA 90 bp AGGTGTGTGTTGGAGCAGACGGAATATAGATTTACTCATATGGGCCCTGCAACACATAGGTATTCCTCGTaGTTCACTCCCCACCCACCC +
Preference number: 2 (lower is better)
Translates to: RCVLEQTEYRFTHMGPATHRYSS*FTPHPP
Trigger: GGGTGGGTGGGGAGTGAAGCACGAGGAATACCTATG...TGTTGCAGGGCCCATATGAGTAAATCTATATTCCGTCTGCTCCAACACACACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
3UTR-3UTR GCA 90 bp TGTTGCCCAGGCCGTTATGAAACTCCTGGGCCCAAGCTATCCTGCCACCTTAGCAGGAAGCATCGAATCTaGTTTTATTTCACATGTCAC +
Preference number: 2 (lower is better)
Translates to: CCPGRYETPGPKLSCHLSRKHRI*FYFTCH
Trigger: GTGACATGTGAAATAAAAGCAGATTCGATGCTTCCT...GCTAAGGTGGCAGGATAGCTTGGGCCCAGGAGTTTCATAACGGCCTGGGCAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616793.5
3UTR-3UTR GCA 90 bp AGGTGTGTGTTGGAGCAGACGGAATATAGATTTACTCATATGGGCCCTGCAACACCGAGATTGTGCCAATaGACTCCAGCATGGGCAACA +
Preference number: 2 (lower is better)
Translates to: RCVLEQTEYRFTHMGPATPRLCQ*TPAWAT
Trigger: TGTTGCCCATGCTGGAGTGCATTGGCACAATCTCGG...TGTTGCAGGGCCCATATGAGTAAATCTATATTCCGTCTGCTCCAACACACACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
3UTR-3UTR TCA 90 bp GGCACAGAGAGGTTAAGTGACTGGGCCAAAGATACCTGGGTCAGCAGTAAATGTGTAGTTCTTAGCTTTTaGTCTCCCTCTCACTGGTGT +
Preference number: 2 (lower is better)
Translates to: GTERLSDWAKDTWVSSKCVVLSF*SPSHWC
Trigger: ACACCAGTGAGAGGGAGATCAAAAGCTAAGAACTAC...ACATTTACTGCTGACCCAGGTATCTTTGGCCCAGTCACTTAACCTCTCTGTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
3UTR-3UTR TCA 90 bp AGGTGTGTGTTGGAGCAGACGGAATATAGATTTACTCATATGGGCCCTGCAACACACAGAGAGGTTAAGTaGCTGGGCCAAAGATACCTG +
Preference number: 2 (lower is better)
Translates to: RCVLEQTEYRFTHMGPATHREVK*LGQRYL
Trigger: CAGGTATCTTTGGCCCAGTCACTTAACCTCTCTGTG...TGTTGCAGGGCCCATATGAGTAAATCTATATTCCGTCTGCTCCAACACACACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
3UTR-3UTR CCA 90 bp GGCACAGAGAGGTTAAGTGACTGGGCCAAAGATACCTGGGTCAGCAGTAAATGTTTCAGAGATGCTCTCTaGCCCATGTTCCCTATAGAT +
Preference number: 2 (lower is better)
Translates to: GTERLSDWAKDTWVSSKCFRDAL*PMFPID
Trigger: ATCTATAGGGAACATGGGCCAGAGAGCATCTCTGAA...ACATTTACTGCTGACCCAGGTATCTTTGGCCCAGTCACTTAACCTCTCTGTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
3UTR-3UTR CCA 90 bp ACTGGCTCTCCTGTGGTAAAAGTGGGGTTCTGTATGATGGCATGCATATGCAATGAGAGGTTAAGTGACTaGGCCAAAGATACCTGGGTC +
Preference number: 2 (lower is better)
Translates to: TGSPVVKVGFCMMACICNERLSD*AKDTWV
Trigger: GACCCAGGTATCTTTGGCCCAGTCACTTAACCTCTC...ATTGCATATGCATGCCATCATACAGAACCCCACTTTTACCACAGGAGAGCCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
3UTR-3UTR TCA 90 bp TTAATGACTGGCTCTCCTGTGGTAAAAGTGGGGTTCTGTATGATGGCATGCATACTGTCGTCTGTGGAATaGATTCCACAAGCTCCACCT +
Preference number: 2 (lower is better)
Translates to: LMTGSPVVKVGFCMMACILSSVE*IPQAPP
Trigger: AGGTGGAGCTTGTGGAATTCATTCCACAGACGACAG...TATGCATGCCATCATACAGAACCCCACTTTTACCACAGGAGAGCCAGTCATTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
3UTR-3UTR TCA 90 bp AGGTGTGTGTTGGAGCAGACGGAATATAGATTTACTCATATGGGCCCTGCAACATTGTTGTGGTCACTGTaGTCCACTTCTCATCTGTCG +
Preference number: 2 (lower is better)
Translates to: RCVLEQTEYRFTHMGPATLLWSL*STSHLS
Trigger: CGACAGATGAGAAGTGGATCACAGTGACCACAACAA...TGTTGCAGGGCCCATATGAGTAAATCTATATTCCGTCTGCTCCAACACACACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
3UTR-3UTR TCA 90 bp TCAAGTTGGCTAGTGTTGGGTCACCAACACTGTAGAGGCACCCTCTTTCACATTAAGTGGGGTTCTGTATaGTGGCATGCATATGCAATC +
Preference number: 2 (lower is better)
Translates to: SSWLVLGHQHCRGTLFHIKWGSV*WHAYAI
Trigger: GATTGCATATGCATGCCATCATACAGAACCCCACTT...AATGTGAAAGAGGGTGCCTCTACAGTGTTGGTGACCCAACACTAGCCAACTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
3UTR-3UTR GCA 90 bp GGCACAGAGAGGTTAAGTGACTGGGCCAAAGATACCTGGGTCAGCAGTAAATGTAAGAAGAGGTCAGAATaGTCTAGGCATGTGAGGATT +
Preference number: 2 (lower is better)
Translates to: GTERLSDWAKDTWVSSKCKKRSE*SRHVRI
Trigger: AATCCTCACATGCCTAGAGCATTCTGACCTCTTCTT...ACATTTACTGCTGACCCAGGTATCTTTGGCCCAGTCACTTAACCTCTCTGTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
3UTR-3UTR GCA 90 bp ATCCACTCTTTAGTAAGTTCGTGGGATCTTGATTGTGGGCAAAATTGGGCTCAACATGAGCCGAGATTGTaGCAATGCACTCCAGCATGG +
Preference number: 2 (lower is better)
Translates to: IHSLVSSWDLDCGQNWAQHEPRL*QCTPAW
Trigger: CCATGCTGGAGTGCATTGGCACAATCTCGGCTCATG...TTGAGCCCAATTTTGCCCACAATCAAGATCCCACGAACTTACTAAAGAGTGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616793.5
3UTR-3UTR CCA 90 bp TCAAGTTGGCTAGTGTTGGGTCACCAACACTGTAGAGGCACCCTCTTTCACATTCTCATCTGTCGTCTGTaGAATGAATTCCACAAGCTC +
Preference number: 2 (lower is better)
Translates to: SSWLVLGHQHCRGTLFHILICRL*NEFHKL
Trigger: GAGCTTGTGGAATTCATTCCACAGACGACAGATGAG...AATGTGAAAGAGGGTGCCTCTACAGTGTTGGTGACCCAACACTAGCCAACTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
3UTR-3UTR CCA 90 bp TCAAGTTGGCTAGTGTTGGGTCACCAACACTGTAGAGGCACCCTCTTTCACATTTTCAGAGATGCTCTCTaGCCCATGTTCCCTATAGAT +
Preference number: 2 (lower is better)
Translates to: SSWLVLGHQHCRGTLFHIFRDAL*PMFPID
Trigger: ATCTATAGGGAACATGGGCCAGAGAGCATCTCTGAA...AATGTGAAAGAGGGTGCCTCTACAGTGTTGGTGACCCAACACTAGCCAACTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
3UTR-3UTR CCA 90 bp GGCACAGAGAGGTTAAGTGACTGGGCCAAAGATACCTGGGTCAGCAGTAAATGTATATTCACATCTCTGTaGCAAACCCGACTCTTGGTA +
Preference number: 2 (lower is better)
Translates to: GTERLSDWAKDTWVSSKCIFTSL*QTRLLV
Trigger: TACCAAGAGTCGGGTTTGCCACAGAGATGTGAATAT...ACATTTACTGCTGACCCAGGTATCTTTGGCCCAGTCACTTAACCTCTCTGTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
3UTR-3UTR CCA 90 bp TCAAGTTGGCTAGTGTTGGGTCACCAACACTGTAGAGGCACCCTCTTTCACATTTGGGCCAAAGATACCTaGGTCAGCAGTAAATGTAAG +
Preference number: 2 (lower is better)
Translates to: SSWLVLGHQHCRGTLFHIWAKDT*VSSKCK
Trigger: CTTACATTTACTGCTGACCCAGGTATCTTTGGCCCA...AATGTGAAAGAGGGTGCCTCTACAGTGTTGGTGACCCAACACTAGCCAACTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
3UTR-3UTR TCA 90 bp GTAAAAGTGGGGTTCTGTATGATGGCATGCATATGCAATCAAGAGAGCTGGGAGGTAGTTCTTAGCTTTTaGTCTCCCTCTCACTGGTGT +
Preference number: 2 (lower is better)
Translates to: VKVGFCMMACICNQESWEVVLSF*SPSHWC
Trigger: ACACCAGTGAGAGGGAGATCAAAAGCTAAGAACTAC...CTCCCAGCTCTCTTGATTGCATATGCATGCCATCATACAGAACCCCACTTTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
3UTR-3UTR TCA 90 bp AAGGAAGCATCGAATCTGCTTTTATTTCACATGTCACATTCGCTCGGGTCCTTTCTGTCGTCTGTGGAATaGATTCCACAAGCTCCACCT +
Preference number: 2 (lower is better)
Translates to: KEASNLLLFHMSHSLGSFLSSVE*IPQAPP
Trigger: AGGTGGAGCTTGTGGAATTCATTCCACAGACGACAG...AAAGGACCCGAGCGAATGTGACATGTGAAATAAAAGCAGATTCGATGCTTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
3UTR-3UTR GCA 90 bp GAGGCTCATGAGCAAGAGTTGGTAAAAATTACAGTTCAGTCTATAGTCTTGAGACATAGGTATTCCTCGTaGTTCACTCCCCACCCACCC +
Preference number: 2 (lower is better)
Translates to: EAHEQELVKITVQSIVLRHRYSS*FTPHPP
Trigger: GGGTGGGTGGGGAGTGAAGCACGAGGAATACCTATG...TCTCAAGACTATAGACTGAACTGTAATTTTTACCAACTCTTGCTCATGAGCCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
3UTR-3UTR GCA 90 bp AGGTGTGTGTTGGAGCAGACGGAATATAGATTTACTCATATGGGCCCTGCAACAATGATGGCATGCATATaGAATCAAGAGAGCTGGGAG +
Preference number: 2 (lower is better)
Translates to: RCVLEQTEYRFTHMGPATMMACI*NQESWE
Trigger: CTCCCAGCTCTCTTGATTGCATATGCATGCCATCAT...TGTTGCAGGGCCCATATGAGTAAATCTATATTCCGTCTGCTCCAACACACACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
3UTR-3UTR CCA 90 bp ACTGGCTCTCCTGTGGTAAAAGTGGGGTTCTGTATGATGGCATGCATATGCAATCTCATCTGTCGTCTGTaGAATGAATTCCACAAGCTC +
Preference number: 2 (lower is better)
Translates to: TGSPVVKVGFCMMACICNLICRL*NEFHKL
Trigger: GAGCTTGTGGAATTCATTCCACAGACGACAGATGAG...ATTGCATATGCATGCCATCATACAGAACCCCACTTTTACCACAGGAGAGCCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
3UTR-3UTR CCA 90 bp GTAAAAGTGGGGTTCTGTATGATGGCATGCATATGCAATCAAGAGAGCTGGGAGCTCATCTGTCGTCTGTaGAATGAATTCCACAAGCTC +
Preference number: 2 (lower is better)
Translates to: VKVGFCMMACICNQESWELICRL*NEFHKL
Trigger: GAGCTTGTGGAATTCATTCCACAGACGACAGATGAG...CTCCCAGCTCTCTTGATTGCATATGCATGCCATCATACAGAACCCCACTTTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
3UTR-3UTR CCA 90 bp GTAAAAGTGGGGTTCTGTATGATGGCATGCATATGCAATCAAGAGAGCTGGGAGTGGGCCAAAGATACCTaGGTCAGCAGTAAATGTAAG +
Preference number: 2 (lower is better)
Translates to: VKVGFCMMACICNQESWEWAKDT*VSSKCK
Trigger: CTTACATTTACTGCTGACCCAGGTATCTTTGGCCCA...CTCCCAGCTCTCTTGATTGCATATGCATGCCATCATACAGAACCCCACTTTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
3UTR CAA 90 bp TTCTTGGTGGGTGGGAAAGCAAAATTAAGAGAAGGAAGGTGTGTGTaGGAGCAGACGGAATATAGATTTACTCATATGGGCCCTGCAACA +
Preference number: 2 (lower is better)
Translates to: FLVGGKAKLREGRCV*EQTEYRFTHMGPAT
Trigger: TGTTGCAGGGCCCATATGAGTAAATCTATATTCCGTCTGCTCCAACACACACCTTCCTTCTCTTAATTTTGCTTTCCCACCCACCAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
3UTR-3UTR TCA 90 bp TTAATGACTGGCTCTCCTGTGGTAAAAGTGGGGTTCTGTATGATGGCATGCATAGTAGTTCTTAGCTTTTaGTCTCCCTCTCACTGGTGT +
Preference number: 2 (lower is better)
Translates to: LMTGSPVVKVGFCMMACIVVLSF*SPSHWC
Trigger: ACACCAGTGAGAGGGAGATCAAAAGCTAAGAACTAC...TATGCATGCCATCATACAGAACCCCACTTTTACCACAGGAGAGCCAGTCATTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
3UTR-3UTR TCA 90 bp TGCTTTTATTTCACATGTCACATTCGCTCGGGTCCTTTGACTTCGTTACCAGTTTTCGCTCGGGTCCTTTaGCTTCGTTACCAGTTTTGT +
Preference number: 2 (lower is better)
Translates to: CFYFTCHIRSGPLTSLPVFARVL*LRYQFC
Trigger: ACAAAACTGGTAACGAAGTCAAAGGACCCGAGCGAA...AACTGGTAACGAAGTCAAAGGACCCGAGCGAATGTGACATGTGAAATAAAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
3UTR-3UTR TCA 90 bp TCAAGTTGGCTAGTGTTGGGTCACCAACACTGTAGAGGCACCCTCTTTCACATTATTTGCTCTCAGAGATaGCTCCAAGACTCAGTAATA +
Preference number: 2 (lower is better)
Translates to: SSWLVLGHQHCRGTLFHIICSQR*LQDSVI
Trigger: TATTACTGAGTCTTGGAGTCATCTCTGAGAGCAAAT...AATGTGAAAGAGGGTGCCTCTACAGTGTTGGTGACCCAACACTAGCCAACTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
3UTR-3UTR GCA 90 bp GTAAAAGTGGGGTTCTGTATGATGGCATGCATATGCAATCAAGAGAGCTGGGAGAAGAAGAGGTCAGAATaGTCTAGGCATGTGAGGATT +
Preference number: 2 (lower is better)
Translates to: VKVGFCMMACICNQESWEKKRSE*SRHVRI
Trigger: AATCCTCACATGCCTAGAGCATTCTGACCTCTTCTT...CTCCCAGCTCTCTTGATTGCATATGCATGCCATCATACAGAACCCCACTTTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
3UTR-3UTR GCA 90 bp AGGTGTGTGTTGGAGCAGACGGAATATAGATTTACTCATATGGGCCCTGCAACAGTAGAGCTATCTTGTTaGTGTCATCTGTCTGGGAAA +
Preference number: 2 (lower is better)
Translates to: RCVLEQTEYRFTHMGPATVELSC*CHLSGK
Trigger: TTTCCCAGACAGATGACAGCAACAAGATAGCTCTAC...TGTTGCAGGGCCCATATGAGTAAATCTATATTCCGTCTGCTCCAACACACACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
3UTR-3UTR GCA 90 bp TCAAGTTGGCTAGTGTTGGGTCACCAACACTGTAGAGGCACCCTCTTTCACATTTACACATATTCTCTATaGATGGGAATTCTAGCCCCA +
Preference number: 2 (lower is better)
Translates to: SSWLVLGHQHCRGTLFHIYTYSL*MGILAP
Trigger: TGGGGCTAGAATTCCCATGCATAGAGAATATGTGTA...AATGTGAAAGAGGGTGCCTCTACAGTGTTGGTGACCCAACACTAGCCAACTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
3UTR-3UTR GCA 90 bp TCAAGTTGGCTAGTGTTGGGTCACCAACACTGTAGAGGCACCCTCTTTCACATTCTCTTTCACATTTCTTaGCTAATGAGCATATGGCTC +
Preference number: 2 (lower is better)
Translates to: SSWLVLGHQHCRGTLFHILFHIS*LMSIWL
Trigger: GAGCCATATGCTCATTAGGCAAGAAATGTGAAAGAG...AATGTGAAAGAGGGTGCCTCTACAGTGTTGGTGACCCAACACTAGCCAACTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
3UTR-3UTR CCA 90 bp TTAATGACTGGCTCTCCTGTGGTAAAAGTGGGGTTCTGTATGATGGCATGCATAATATTCACATCTCTGTaGCAAACCCGACTCTTGGTA +
Preference number: 2 (lower is better)
Translates to: LMTGSPVVKVGFCMMACIIFTSL*QTRLLV
Trigger: TACCAAGAGTCGGGTTTGCCACAGAGATGTGAATAT...TATGCATGCCATCATACAGAACCCCACTTTTACCACAGGAGAGCCAGTCATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
3UTR-3UTR CCA 90 bp AGGTGTGTGTTGGAGCAGACGGAATATAGATTTACTCATATGGGCCCTGCAACATGCAATCAAGAGAGCTaGGAGATGCTTATCATAGAA +
Preference number: 2 (lower is better)
Translates to: RCVLEQTEYRFTHMGPATCNQES*EMLIIE
Trigger: TTCTATGATAAGCATCTCCCAGCTCTCTTGATTGCA...TGTTGCAGGGCCCATATGAGTAAATCTATATTCCGTCTGCTCCAACACACACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
3UTR CAA 90 bp AGTAATTTATCCTCTTCCATATTTTCTGACTCAAGTTGGCTAGTGTaGGGTCACCAACACTGTAGAGGCACCCTCTTTCACATTTCTTGC +
Preference number: 2 (lower is better)
Translates to: SNLSSSIFSDSSWLV*GHQHCRGTLFHISC
Trigger: GCAAGAAATGTGAAAGAGGGTGCCTCTACAGTGTTGGTGACCCAACACTAGCCAACTTGAGTCAGAAAATATGGAAGAGGATAAATTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
3UTR-3UTR TCA 90 bp GACCCCAGCATTCTAGTTTTTATTGTACATTCTTCAGTTATTGTTCTGGCTTTGCTGTCGTCTGTGGAATaGATTCCACAAGCTCCACCT +
Preference number: 2 (lower is better)
Translates to: DPSILVFIVHSSVIVLALLSSVE*IPQAPP
Trigger: AGGTGGAGCTTGTGGAATTCATTCCACAGACGACAG...CAAAGCCAGAACAATAACTGAAGAATGTACAATAAAAACTAGAATGCTGGGGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
3UTR-3UTR TCA 90 bp ATCCACTCTTTAGTAAGTTCGTGGGATCTTGATTGTGGGCAAAATTGGGCTCAATGGAACCTACCTAGTTaGATAAAGAATCCAGCAGGA +
Preference number: 2 (lower is better)
Translates to: IHSLVSSWDLDCGQNWAQWNLPS*IKNPAG
Trigger: TCCTGCTGGATTCTTTATTCAACTAGGTAGGTTCCA...TTGAGCCCAATTTTGCCCACAATCAAGATCCCACGAACTTACTAAAGAGTGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616793.5
3UTR-3UTR GCA 90 bp TTAATGACTGGCTCTCCTGTGGTAAAAGTGGGGTTCTGTATGATGGCATGCATATTGTTGATAGAGGAATaGAGATGTGAGAGTAGGACA +
Preference number: 2 (lower is better)
Translates to: LMTGSPVVKVGFCMMACILLIEE*RCESRT
Trigger: TGTCCTACTCTCACATCTGCATTCCTCTATCAACAA...TATGCATGCCATCATACAGAACCCCACTTTTACCACAGGAGAGCCAGTCATTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
3UTR-3UTR GCA 90 bp ATCCACTCTTTAGTAAGTTCGTGGGATCTTGATTGTGGGCAAAATTGGGCTCAAGTAGAGCTATCTTGTTaGTGTCATCTGTCTGGGAAA +
Preference number: 2 (lower is better)
Translates to: IHSLVSSWDLDCGQNWAQVELSC*CHLSGK
Trigger: TTTCCCAGACAGATGACAGCAACAAGATAGCTCTAC...TTGAGCCCAATTTTGCCCACAATCAAGATCCCACGAACTTACTAAAGAGTGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616793.5
3UTR-3UTR GCA 90 bp AGGTGTGTGTTGGAGCAGACGGAATATAGATTTACTCATATGGGCCCTGCAACATTACAAAGCACATTGTaGTACTTTAAGCACCTCTTG +
Preference number: 2 (lower is better)
Translates to: RCVLEQTEYRFTHMGPATLQSTL*YFKHLL
Trigger: CAAGAGGTGCTTAAAGTAGCACAATGTGCTTTGTAA...TGTTGCAGGGCCCATATGAGTAAATCTATATTCCGTCTGCTCCAACACACACCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
3UTR-3UTR GCA 90 bp AGGTGTGTGTTGGAGCAGACGGAATATAGATTTACTCATATGGGCCCTGCAACAGTGATACTGTCAGTTTaGTCCAAGCCTTTGTTTAAT +
Preference number: 2 (lower is better)
Translates to: RCVLEQTEYRFTHMGPATVILSV*SKPLFN
Trigger: ATTAAACAAAGGCTTGGAGCAAACTGACAGTATCAC...TGTTGCAGGGCCCATATGAGTAAATCTATATTCCGTCTGCTCCAACACACACCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
3UTR-3UTR CCA 90 bp ATCCACTCTTTAGTAAGTTCGTGGGATCTTGATTGTGGGCAAAATTGGGCTCAATTTTCTGACTCAAGTTaGCTAGTGTTGGGTCACCAA +
Preference number: 2 (lower is better)
Translates to: IHSLVSSWDLDCGQNWAQFSDSS*LVLGHQ
Trigger: TTGGTGACCCAACACTAGCCAACTTGAGTCAGAAAA...TTGAGCCCAATTTTGCCCACAATCAAGATCCCACGAACTTACTAAAGAGTGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616793.5
3UTR-3UTR TCA 90 bp TGCTTTTATTTCACATGTCACATTCGCTCGGGTCCTTTGACTTCGTTACCAGTTCTGCACAGCAGGGGTTaGATATTTCATTGTAACTTT +
Preference number: 2 (lower is better)
Translates to: CFYFTCHIRSGPLTSLPVLHSRG*IFHCNF
Trigger: AAAGTTACAATGAAATATTCAACCCCTGCTGTGCAG...AACTGGTAACGAAGTCAAAGGACCCGAGCGAATGTGACATGTGAAATAAAAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
3UTR-3UTR TCA 90 bp GACCCCAGCATTCTAGTTTTTATTGTACATTCTTCAGTTATTGTTCTGGCTTTGTTGTTGTGGTCACTGTaGTCCACTTCTCATCTGTCG +
Preference number: 2 (lower is better)
Translates to: DPSILVFIVHSSVIVLALLLWSL*STSHLS
Trigger: CGACAGATGAGAAGTGGATCACAGTGACCACAACAA...CAAAGCCAGAACAATAACTGAAGAATGTACAATAAAAACTAGAATGCTGGGGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
3UTR-3UTR TCA 90 bp GACCCCAGCATTCTAGTTTTTATTGTACATTCTTCAGTTATTGTTCTGGCTTTGTTCGCTCGGGTCCTTTaGCTTCGTTACCAGTTTTGT +
Preference number: 2 (lower is better)
Translates to: DPSILVFIVHSSVIVLALFARVL*LRYQFC
Trigger: ACAAAACTGGTAACGAAGTCAAAGGACCCGAGCGAA...CAAAGCCAGAACAATAACTGAAGAATGTACAATAAAAACTAGAATGCTGGGGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
3UTR-3UTR TCA 90 bp GAGGCTCATGAGCAAGAGTTGGTAAAAATTACAGTTCAGTCTATAGTCTTGAGAAAGTGGGGTTCTGTATaGTGGCATGCATATGCAATC +
Preference number: 2 (lower is better)
Translates to: EAHEQELVKITVQSIVLRKWGSV*WHAYAI
Trigger: GATTGCATATGCATGCCATCATACAGAACCCCACTT...TCTCAAGACTATAGACTGAACTGTAATTTTTACCAACTCTTGCTCATGAGCCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
3UTR-3UTR TCA 90 bp ATCCACTCTTTAGTAAGTTCGTGGGATCTTGATTGTGGGCAAAATTGGGCTCAAGCTGTTGTTCTCATATaGCTTATAGCAGATAAGCAG +
Preference number: 2 (lower is better)
Translates to: IHSLVSSWDLDCGQNWAQAVVLI*LIADKQ
Trigger: CTGCTTATCTGCTATAAGTCATATGAGAACAACAGC...TTGAGCCCAATTTTGCCCACAATCAAGATCCCACGAACTTACTAAAGAGTGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616793.5
3UTR-3UTR CCA 90 bp AGGTGTGTGTTGGAGCAGACGGAATATAGATTTACTCATATGGGCCCTGCAACATGCCTAATGAGCATATaGCTCATATTTAATCTGGAA +
Preference number: 2 (lower is better)
Translates to: RCVLEQTEYRFTHMGPATCLMSI*LIFNLE
Trigger: TTCCAGATTAAATATGAGCCATATGCTCATTAGGCA...TGTTGCAGGGCCCATATGAGTAAATCTATATTCCGTCTGCTCCAACACACACCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
3UTR-3UTR CCA 90 bp ATCCACTCTTTAGTAAGTTCGTGGGATCTTGATTGTGGGCAAAATTGGGCTCAAATTAAGCATTGGACTTaGACTCCCAGCAAGAGATTT +
Preference number: 2 (lower is better)
Translates to: IHSLVSSWDLDCGQNWAQIKHWT*TPSKRF
Trigger: AAATCTCTTGCTGGGAGTCCAAGTCCAATGCTTAAT...TTGAGCCCAATTTTGCCCACAATCAAGATCCCACGAACTTACTAAAGAGTGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616793.5
3UTR-3UTR TCA 90 bp ATCCACTCTTTAGTAAGTTCGTGGGATCTTGATTGTGGGCAAAATTGGGCTCAATTCTGTGCCACTCTTTaGCAGATTGAAATAATGCAA +
Preference number: 2 (lower is better)
Translates to: IHSLVSSWDLDCGQNWAQFCATL*QIEIMQ
Trigger: TTGCATTATTTCAATCTGTCAAAGAGTGGCACAGAA...TTGAGCCCAATTTTGCCCACAATCAAGATCCCACGAACTTACTAAAGAGTGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616793.5
3UTR-3UTR TCA 90 bp ATCCACTCTTTAGTAAGTTCGTGGGATCTTGATTGTGGGCAAAATTGGGCTCAAGGAAGCATAAACTCATaGCATAAACAGTCATCTAAG +
Preference number: 2 (lower is better)
Translates to: IHSLVSSWDLDCGQNWAQGSINS*HKQSSK
Trigger: CTTAGATGACTGTTTATGTCATGAGTTTATGCTTCC...TTGAGCCCAATTTTGCCCACAATCAAGATCCCACGAACTTACTAAAGAGTGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616793.5
3UTR-3UTR GCA 90 bp ATCCACTCTTTAGTAAGTTCGTGGGATCTTGATTGTGGGCAAAATTGGGCTCAATTACAAAGCACATTGTaGTACTTTAAGCACCTCTTG +
Preference number: 2 (lower is better)
Translates to: IHSLVSSWDLDCGQNWAQLQSTL*YFKHLL
Trigger: CAAGAGGTGCTTAAAGTAGCACAATGTGCTTTGTAA...TTGAGCCCAATTTTGCCCACAATCAAGATCCCACGAACTTACTAAAGAGTGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616793.5
3UTR-3UTR GCA 90 bp GAGGCTCATGAGCAAGAGTTGGTAAAAATTACAGTTCAGTCTATAGTCTTGAGAAACAAGCAAACCTTTTaGCTGGCCCTAAACACATCT +
Preference number: 2 (lower is better)
Translates to: EAHEQELVKITVQSIVLRNKQTF*LALNTS
Trigger: AGATGTGTTTAGGGCCAGGCAAAAGGTTTGCTTGTT...TCTCAAGACTATAGACTGAACTGTAATTTTTACCAACTCTTGCTCATGAGCCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
3UTR-3UTR CCA 90 bp TTAAGTGACTGGGCCAAAGATACCTGGGTCAGCAGTAAATGTAAGAACAAAAAGCATAGAAAGAGTTTCTaGCTCCCTACACATATTCTC +
Preference number: 2 (lower is better)
Translates to: LSDWAKDTWVSSKCKNKKHRKSF*LPTHIL
Trigger: GAGAATATGTGTAGGGAGCCAGAAACTCTTTCTATG...CTTTTTGTTCTTACATTTACTGCTGACCCAGGTATCTTTGGCCCAGTCACTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
3UTR-3UTR TCA 90 bp GAGGCTCATGAGCAAGAGTTGGTAAAAATTACAGTTCAGTCTATAGTCTTGAGAAAGTCAGGGAGCATGTaGTTTACAGTATCATCTTCT +
Preference number: 2 (lower is better)
Translates to: EAHEQELVKITVQSIVLRKSGSM*FTVSSS
Trigger: AGAAGATGATACTGTAAATCACATGCTCCCTGACTT...TCTCAAGACTATAGACTGAACTGTAATTTTTACCAACTCTTGCTCATGAGCCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
3UTR-3UTR GCA 90 bp TTAAGTGACTGGGCCAAAGATACCTGGGTCAGCAGTAAATGTAAGAACAAAAAGAGGAAGCATCGAATCTaGTTTTATTTCACATGTCAC +
Preference number: 2 (lower is better)
Translates to: LSDWAKDTWVSSKCKNKKRKHRI*FYFTCH
Trigger: GTGACATGTGAAATAAAAGCAGATTCGATGCTTCCT...CTTTTTGTTCTTACATTTACTGCTGACCCAGGTATCTTTGGCCCAGTCACTTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
3UTR-3UTR GCA 90 bp GAGGCTCATGAGCAAGAGTTGGTAAAAATTACAGTTCAGTCTATAGTCTTGAGATTGTTGATAGAGGAATaGAGATGTGAGAGTAGGACA +
Preference number: 2 (lower is better)
Translates to: EAHEQELVKITVQSIVLRLLIEE*RCESRT
Trigger: TGTCCTACTCTCACATCTGCATTCCTCTATCAACAA...TCTCAAGACTATAGACTGAACTGTAATTTTTACCAACTCTTGCTCATGAGCCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
3UTR-3UTR GCA 90 bp TTCAGGAACATACATTTGCTCTCAGAGATGACTCCAAGACTCAGTAATACACAATTGTTGATAGAGGAATaGAGATGTGAGAGTAGGACA +
Preference number: 2 (lower is better)
Translates to: FRNIHLLSEMTPRLSNTQLLIEE*RCESRT
Trigger: TGTCCTACTCTCACATCTGCATTCCTCTATCAACAA...TTGTGTATTACTGAGTCTTGGAGTCATCTCTGAGAGCAAATGTATGTTCCTGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
3UTR-3UTR GCA 90 bp GAGGCTCATGAGCAAGAGTTGGTAAAAATTACAGTTCAGTCTATAGTCTTGAGATTCTGTATGATGGCATaGATATGCAATCAAGAGAGC +
Preference number: 2 (lower is better)
Translates to: EAHEQELVKITVQSIVLRFCMMA*ICNQES
Trigger: GCTCTCTTGATTGCATATGCATGCCATCATACAGAA...TCTCAAGACTATAGACTGAACTGTAATTTTTACCAACTCTTGCTCATGAGCCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
3UTR-3UTR GCA 90 bp GAGGCTCATGAGCAAGAGTTGGTAAAAATTACAGTTCAGTCTATAGTCTTGAGACTCTTTCACATTTCTTaGCTAATGAGCATATGGCTC +
Preference number: 2 (lower is better)
Translates to: EAHEQELVKITVQSIVLRLFHIS*LMSIWL
Trigger: GAGCCATATGCTCATTAGGCAAGAAATGTGAAAGAG...TCTCAAGACTATAGACTGAACTGTAATTTTTACCAACTCTTGCTCATGAGCCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
3UTR-3UTR TCA 90 bp GACCCCAGCATTCTAGTTTTTATTGTACATTCTTCAGTTATTGTTCTGGCTTTGCTGCACAGCAGGGGTTaGATATTTCATTGTAACTTT +
Preference number: 2 (lower is better)
Translates to: DPSILVFIVHSSVIVLALLHSRG*IFHCNF
Trigger: AAAGTTACAATGAAATATTCAACCCCTGCTGTGCAG...CAAAGCCAGAACAATAACTGAAGAATGTACAATAAAAACTAGAATGCTGGGGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
3UTR-3UTR TCA 90 bp GACCCCAGCATTCTAGTTTTTATTGTACATTCTTCAGTTATTGTTCTGGCTTTGAAGTCAGGGAGCATGTaGTTTACAGTATCATCTTCT +
Preference number: 2 (lower is better)
Translates to: DPSILVFIVHSSVIVLALKSGSM*FTVSSS
Trigger: AGAAGATGATACTGTAAATCACATGCTCCCTGACTT...CAAAGCCAGAACAATAACTGAAGAATGTACAATAAAAACTAGAATGCTGGGGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
3UTR-3UTR TCA 90 bp GAGGCTCATGAGCAAGAGTTGGTAAAAATTACAGTTCAGTCTATAGTCTTGAGAATCAAGCTAATTATGTaGTACTGTCAGTTTGCTCCA +
Preference number: 2 (lower is better)
Translates to: EAHEQELVKITVQSIVLRIKLIM*YCQFAP
Trigger: TGGAGCAAACTGACAGTATCACATAATTAGCTTGAT...TCTCAAGACTATAGACTGAACTGTAATTTTTACCAACTCTTGCTCATGAGCCTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
3UTR-3UTR GCA 90 bp GAGGCTCATGAGCAAGAGTTGGTAAAAATTACAGTTCAGTCTATAGTCTTGAGAGTGATACTGTCAGTTTaGTCCAAGCCTTTGTTTAAT +
Preference number: 2 (lower is better)
Translates to: EAHEQELVKITVQSIVLRVILSV*SKPLFN
Trigger: ATTAAACAAAGGCTTGGAGCAAACTGACAGTATCAC...TCTCAAGACTATAGACTGAACTGTAATTTTTACCAACTCTTGCTCATGAGCCTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
3UTR CAA 90 bp AGCATTCTAGTTTTTATTGTACATTCTTCAGTTATTGTTCTGGCTTaGCAAATGCCAGTGCTAAAACTGAAGGATGATAGTGAACCCACA +
Preference number: 2 (lower is better)
Translates to: SILVFIVHSSVIVLA*QMPVLKLKDDSEPT
Trigger: TGTGGGTTCACTATCATCCTTCAGTTTTAGCACTGGCATTTGCAAAGCCAGAACAATAACTGAAGAATGTACAATAAAAACTAGAATGCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
3UTR-3UTR GCA 90 bp CAAACTTTATTTCTCCTATTACTAGTGGAGAACACATTTGCTCTCTACCTAAGTTACACATATTCTCTATaGATGGGAATTCTAGCCCCA +
Preference number: 2 (lower is better)
Translates to: QTLFLLLLVENTFALYLSYTYSL*MGILAP
Trigger: TGGGGCTAGAATTCCCATGCATAGAGAATATGTGTA...ACTTAGGTAGAGAGCAAATGTGTTCTCCACTAGTAATAGGAGAAATAAAGTTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616793.5
3UTR-3UTR CCA 90 bp GAGGCTCATGAGCAAGAGTTGGTAAAAATTACAGTTCAGTCTATAGTCTTGAGATGCCTAATGAGCATATaGCTCATATTTAATCTGGAA +
Preference number: 2 (lower is better)
Translates to: EAHEQELVKITVQSIVLRCLMSI*LIFNLE
Trigger: TTCCAGATTAAATATGAGCCATATGCTCATTAGGCA...TCTCAAGACTATAGACTGAACTGTAATTTTTACCAACTCTTGCTCATGAGCCTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
3UTR-3UTR CCA 90 bp CAAACTTTATTTCTCCTATTACTAGTGGAGAACACATTTGCTCTCTACCTAAGTGACTTACAAATTTCTTaGTGGGTGGGAAAGCAAAAT +
Preference number: 2 (lower is better)
Translates to: QTLFLLLLVENTFALYLSDLQIS*WVGKQN
Trigger: ATTTTGCTTTCCCACCCACCAAGAAATTTGTAAGTC...ACTTAGGTAGAGAGCAAATGTGTTCTCCACTAGTAATAGGAGAAATAAAGTTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616793.5
3UTR-3UTR CAA 90 bp TGTTGCCCAGGCCGTTATGAAACTCCTGGGCCCAAGCTATCCTGCCACCTTAGCCTCTACCTTATGGACTaGGGAAGACACATACAACCT +
Preference number: 3 (lower is better)
Translates to: CCPGRYETPGPKLSCHLSLYLMD*GRHIQP
Trigger: AGGTTGTATGTGTCTTCCCAAGTCCATAAGGTAGAG...GCTAAGGTGGCAGGATAGCTTGGGCCCAGGAGTTTCATAACGGCCTGGGCAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616793.5
3UTR-3UTR CAA 90 bp TGTTGCCCAGGCCGTTATGAAACTCCTGGGCCCAAGCTATCCTGCCACCTTAGCGTTATTGTTCTGGCTTaGCAAATGCCAGTGCTAAAA +
Preference number: 3 (lower is better)
Translates to: CCPGRYETPGPKLSCHLSVIVLA*QMPVLK
Trigger: TTTTAGCACTGGCATTTGCAAAGCCAGAACAATAAC...GCTAAGGTGGCAGGATAGCTTGGGCCCAGGAGTTTCATAACGGCCTGGGCAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616793.5
3UTR-3UTR CAA 90 bp TGTTGCCCAGGCCGTTATGAAACTCCTGGGCCCAAGCTATCCTGCCACCTTAGCGCTCATGAGCAAGAGTaGGTAAAAATTACAGTTCAG +
Preference number: 3 (lower is better)
Translates to: CCPGRYETPGPKLSCHLSAHEQE*VKITVQ
Trigger: CTGAACTGTAATTTTTACCAACTCTTGCTCATGAGC...GCTAAGGTGGCAGGATAGCTTGGGCCCAGGAGTTTCATAACGGCCTGGGCAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616793.5
3UTR GCA 72 bp AATGCTGTTCTGACTGCTACAAACTCAGTAGCCAAATaGATCTCGGTAGTACAGATGCAGAAGTGGGGCCAC +
Preference number: 3 (lower is better)
Translates to: NAVLTATNSVAK*ISVVQMQKWGH
Trigger: GTGGCCCCACTTCTGCATCTGTACTACCGAGATGCATTTGGCTACTGAGTTTGTAGCAGTCAGAACAGCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616793.5
3UTR-3UTR CAA 90 bp TCAAGTTGGCTAGTGTTGGGTCACCAACACTGTAGAGGCACCCTCTTTCACATTATTCGCTCGGGTCCTTaGACTTCGTTACCAGTTTTG +
Preference number: 3 (lower is better)
Translates to: SSWLVLGHQHCRGTLFHIIRSGP*TSLPVL
Trigger: CAAAACTGGTAACGAAGTCAAAGGACCCGAGCGAAT...AATGTGAAAGAGGGTGCCTCTACAGTGTTGGTGACCCAACACTAGCCAACTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
3UTR-3UTR CAA 90 bp TCAAGTTGGCTAGTGTTGGGTCACCAACACTGTAGAGGCACCCTCTTTCACATTAGTAGAGCTATCTTGTaGCTGTCATCTGTCTGGGAA +
Preference number: 3 (lower is better)
Translates to: SSWLVLGHQHCRGTLFHISRAIL*LSSVWE
Trigger: TTCCCAGACAGATGACAGCAACAAGATAGCTCTACT...AATGTGAAAGAGGGTGCCTCTACAGTGTTGGTGACCCAACACTAGCCAACTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
3UTR CCA 72 bp GGCACAGAGAGGTTAAGTGACTGGGCCAAAGATACCTaGGTCAGCAGTAAATGTAAGAACAAAAAGTGGGAC +
Preference number: 3 (lower is better)
Translates to: GTERLSDWAKDT*VSSKCKNKKWD
Trigger: GTCCCACTTTTTGTTCTTACATTTACTGCTGACCCAGGTATCTTTGGCCCAGTCACTTAACCTCTCTGTGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
3UTR-3UTR CAA 90 bp GGCACAGAGAGGTTAAGTGACTGGGCCAAAGATACCTGGGTCAGCAGTAAATGTAATGAGATCAGTCCATaGTTGATAGAGGAATGCAGA +
Preference number: 3 (lower is better)
Translates to: GTERLSDWAKDTWVSSKCNEISP*LIEECR
Trigger: TCTGCATTCCTCTATCAACAATGGACTGATCTCATT...ACATTTACTGCTGACCCAGGTATCTTTGGCCCAGTCACTTAACCTCTCTGTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
3UTR-3UTR CAA 90 bp ACTGGCTCTCCTGTGGTAAAAGTGGGGTTCTGTATGATGGCATGCATATGCAATAATGTCCCAAGTAGCTaGATAAGCAAGCTTCAGTGC +
Preference number: 3 (lower is better)
Translates to: TGSPVVKVGFCMMACICNNVPSS*ISKLQC
Trigger: GCACTGAAGCTTGCTTATCAAGCTACTTGGGACATT...ATTGCATATGCATGCCATCATACAGAACCCCACTTTTACCACAGGAGAGCCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
3UTR TCA 72 bp GGGAAGAGTTCAAACACTAAATGCTCGACAAAAACATaGGTTCCCAGCAGAAGCAGCAGCAGCGCAGAAAAA +
Preference number: 3 (lower is better)
Translates to: GKSSNTKCSTKT*VPSRSSSSAEK
Trigger: TTTTTCTGCGCTGCTGCTGCTTCTGCTGGGAACTCATGTTTTTGTCGAGCATTTAGTGTTTGAACTCTTCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616793.5
3UTR GCA 72 bp TCTCCTGTGGTAAAAGTGGGGTTCTGTATGATGGCATaGATATGCAATCAAGAGAGCTGGGAGATGCTTATC +
Preference number: 3 (lower is better)
Translates to: SPVVKVGFCMMA*ICNQESWEMLI
Trigger: GATAAGCATCTCCCAGCTCTCTTGATTGCATATGCATGCCATCATACAGAACCCCACTTTTACCACAGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
3UTR CCA 72 bp TGTGGTCACTGTGATCCACTTCTCATCTGTCGTCTGTaGAATGAATTCCACAAGCTCCACCTTTTGCAGAAA +
Preference number: 3 (lower is better)
Translates to: CGHCDPLLICRL*NEFHKLHLLQK
Trigger: TTTCTGCAAAAGGTGGAGCTTGTGGAATTCATTCCACAGACGACAGATGAGAAGTGGATCACAGTGACCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
3UTR CCA 72 bp GTGATAACCCAGGCCTTCTATATCAGCTCTACCTTATaGACTTGGGAAGACACATACAACCTGTATGAGCAG +
Preference number: 3 (lower is better)
Translates to: VITQAFYISSTL*TWEDTYNLYEQ
Trigger: CTGCTCATACAGGTTGTATGTGTCTTCCCAAGTCCATAAGGTAGAGCTGATATAGAAGGCCTGGGTTATCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616793.5
3UTR-3UTR CAA 90 bp TCAAGTTGGCTAGTGTTGGGTCACCAACACTGTAGAGGCACCCTCTTTCACATTTATTTCATTGTAACTTaGGTTCCATGCCCAAGACAC +
Preference number: 3 (lower is better)
Translates to: SSWLVLGHQHCRGTLFHIYFIVT*VPCPRH
Trigger: GTGTCTTGGGCATGGAACCAAAGTTACAATGAAATA...AATGTGAAAGAGGGTGCCTCTACAGTGTTGGTGACCCAACACTAGCCAACTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
3UTR-3UTR CAA 90 bp TTAATGACTGGCTCTCCTGTGGTAAAAGTGGGGTTCTGTATGATGGCATGCATAAGTAGAGCTATCTTGTaGCTGTCATCTGTCTGGGAA +
Preference number: 3 (lower is better)
Translates to: LMTGSPVVKVGFCMMACISRAIL*LSSVWE
Trigger: TTCCCAGACAGATGACAGCAACAAGATAGCTCTACT...TATGCATGCCATCATACAGAACCCCACTTTTACCACAGGAGAGCCAGTCATTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
3UTR-3UTR CAA 90 bp AGGTGTGTGTTGGAGCAGACGGAATATAGATTTACTCATATGGGCCCTGCAACAAAAAGTAGAGCTATCTaGTTGCTGTCATCTGTCTGG +
Preference number: 3 (lower is better)
Translates to: RCVLEQTEYRFTHMGPATKSRAI*LLSSVW
Trigger: CCAGACAGATGACAGCAACAAGATAGCTCTACTTTT...TGTTGCAGGGCCCATATGAGTAAATCTATATTCCGTCTGCTCCAACACACACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
3UTR-3UTR CAA 90 bp ACTGGCTCTCCTGTGGTAAAAGTGGGGTTCTGTATGATGGCATGCATATGCAATAGATTTTCAACAGGGTaGTGTAGGAACTGTCAAGTA +
Preference number: 3 (lower is better)
Translates to: TGSPVVKVGFCMMACICNRFSTG*CRNCQV
Trigger: TACTTGACAGTTCCTACACAACCCTGTTGAAAATCT...ATTGCATATGCATGCCATCATACAGAACCCCACTTTTACCACAGGAGAGCCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
3UTR-3UTR CAA 90 bp ACTGGCTCTCCTGTGGTAAAAGTGGGGTTCTGTATGATGGCATGCATATGCAATAATGAGATCAGTCCATaGTTGATAGAGGAATGCAGA +
Preference number: 3 (lower is better)
Translates to: TGSPVVKVGFCMMACICNNEISP*LIEECR
Trigger: TCTGCATTCCTCTATCAACAATGGACTGATCTCATT...ATTGCATATGCATGCCATCATACAGAACCCCACTTTTACCACAGGAGAGCCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
3UTR TCA 72 bp AGTTGTAGTCCTGGCTACAGGGTAGTTCTTAGCTTTTaGTCTCCCTCTCACTGGTGTAAACAATTTTGCCAT +
Preference number: 3 (lower is better)
Translates to: SCSPGYRVVLSF*SPSHWCKQFCH
Trigger: ATGGCAAAATTGTTTACACCAGTGAGAGGGAGATCAAAAGCTAAGAACTACCCTGTAGCCAGGACTACAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265272.9
ENST00000333010.6
ENST00000507386.5
ENST00000616793.5
3UTR TCA 72 bp GCTTTTATTTCACATGTCACATTCGCTCGGGTCCTTTaGCTTCGTTACCAGTTTTGTTGTGGTCACTGTGAT +
Preference number: 3 (lower is better)
Translates to: AFISHVTFARVL*LRYQFCCGHCD
Trigger: ATCACAGTGACCACAACAAAACTGGTAACGAAGTCAAAGGACCCGAGCGAATGTGACATGTGAAATAAAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
3UTR GCA 72 bp GTGGTAAAAGTGGGGTTCTGTATGATGGCATGCATATaGAATCAAGAGAGCTGGGAGATGCTTATCATAGAA +
Preference number: 3 (lower is better)
Translates to: VVKVGFCMMACI*NQESWEMLIIE
Trigger: TTCTATGATAAGCATCTCCCAGCTCTCTTGATTGCATATGCATGCCATCATACAGAACCCCACTTTTACCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
3UTR CCA 72 bp ATACTGTCAGTTTGCTCCAAGCCTTTGTTTAATGACTaGCTCTCCTGTGGTAAAAGTGGGGTTCTGTATGAT +
Preference number: 3 (lower is better)
Translates to: ILSVCSKPLFND*LSCGKSGVLYD
Trigger: ATCATACAGAACCCCACTTTTACCACAGGAGAGCCAGTCATTAAACAAAGGCTTGGAGCAAACTGACAGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
3UTR CCA 72 bp AGTAATTTATCCTCTTCCATATTTTCTGACTCAAGTTaGCTAGTGTTGGGTCACCAACACTGTAGAGGCACC +
Preference number: 3 (lower is better)
Translates to: SNLSSSIFSDSS*LVLGHQHCRGT
Trigger: GGTGCCTCTACAGTGTTGGTGACCCAACACTAGCCAACTTGAGTCAGAAAATATGGAAGAGGATAAATTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
3UTR-3UTR CAA 90 bp TTAAGTGACTGGGCCAAAGATACCTGGGTCAGCAGTAAATGTAAGAACAAAAAGGCCCAAGACACATCTTaGCTTGATCTGCAGAAACTA +
Preference number: 3 (lower is better)
Translates to: LSDWAKDTWVSSKCKNKKAQDTS*LDLQKL
Trigger: TAGTTTCTGCAGATCAAGCAAAGATGTGTCTTGGGC...CTTTTTGTTCTTACATTTACTGCTGACCCAGGTATCTTTGGCCCAGTCACTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
3UTR-3UTR CAA 90 bp GAGGCTCATGAGCAAGAGTTGGTAAAAATTACAGTTCAGTCTATAGTCTTGAGAGAAGGAAGGTGTGTGTaGGAGCAGACGGAATATAGA +
Preference number: 3 (lower is better)
Translates to: EAHEQELVKITVQSIVLREGRCV*EQTEYR
Trigger: TCTATATTCCGTCTGCTCCAACACACACCTTCCTTC...TCTCAAGACTATAGACTGAACTGTAATTTTTACCAACTCTTGCTCATGAGCCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
3UTR TCA 72 bp GGAAAGAAAGAACCCCAATTGAGGCAGTTGATTGAATaGAAGCTCTGTGAAATTGGACCCTTGGCTACATTA +
Preference number: 3 (lower is better)
Translates to: GKKEPQLRQLIE*KLCEIGPLATL
Trigger: TAATGTAGCCAAGGGTCCAATTTCACAGAGCTTTCATTCAATCAACTGCCTCAATTGGGGTTCTTTCTTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616793.5
3UTR GCA 72 bp ATTAAGTTAATGAACCCGGAAGAATGCTGTTCTGACTaGTACAAACTCAGTAGCCAAATGCATCTCGGTAGT +
Preference number: 3 (lower is better)
Translates to: IKLMNPEECCSD*YKLSSQMHLGS
Trigger: ACTACCGAGATGCATTTGGCTACTGAGTTTGTAGCAGTCAGAACAGCATTCTTCCGGGTTCATTAACTTAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616793.5
3UTR-3UTR CAA 90 bp TTCAGGAACATACATTTGCTCTCAGAGATGACTCCAAGACTCAGTAATACACAAGCCCAAGACACATCTTaGCTTGATCTGCAGAAACTA +
Preference number: 3 (lower is better)
Translates to: FRNIHLLSEMTPRLSNTQAQDTS*LDLQKL
Trigger: TAGTTTCTGCAGATCAAGCAAAGATGTGTCTTGGGC...TTGTGTATTACTGAGTCTTGGAGTCATCTCTGAGAGCAAATGTATGTTCCTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
3UTR-3UTR CAA 90 bp TTAAGTGACTGGGCCAAAGATACCTGGGTCAGCAGTAAATGTAAGAACAAAAAGAGATTTTCAACAGGGTaGTGTAGGAACTGTCAAGTA +
Preference number: 3 (lower is better)
Translates to: LSDWAKDTWVSSKCKNKKRFSTG*CRNCQV
Trigger: TACTTGACAGTTCCTACACAACCCTGTTGAAAATCT...CTTTTTGTTCTTACATTTACTGCTGACCCAGGTATCTTTGGCCCAGTCACTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
3UTR-3UTR CAA 90 bp TTCAGGAACATACATTTGCTCTCAGAGATGACTCCAAGACTCAGTAATACACAAGAGATCAGTCCATTGTaGATAGAGGAATGCAGATGT +
Preference number: 3 (lower is better)
Translates to: FRNIHLLSEMTPRLSNTQEISPL*IEECRC
Trigger: ACATCTGCATTCCTCTATCAACAATGGACTGATCTC...TTGTGTATTACTGAGTCTTGGAGTCATCTCTGAGAGCAAATGTATGTTCCTGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
3UTR-3UTR CAA 90 bp GAGGCTCATGAGCAAGAGTTGGTAAAAATTACAGTTCAGTCTATAGTCTTGAGATGGCAAACCCGACTCTaGGTAGAAATTTACTCATTG +
Preference number: 3 (lower is better)
Translates to: EAHEQELVKITVQSIVLRWQTRL*VEIYSL
Trigger: CAATGAGTAAATTTCTACCAAGAGTCGGGTTTGCCA...TCTCAAGACTATAGACTGAACTGTAATTTTTACCAACTCTTGCTCATGAGCCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
3UTR-3UTR CAA 90 bp TTCAGGAACATACATTTGCTCTCAGAGATGACTCCAAGACTCAGTAATACACAATGGCAAACCCGACTCTaGGTAGAAATTTACTCATTG +
Preference number: 3 (lower is better)
Translates to: FRNIHLLSEMTPRLSNTQWQTRL*VEIYSL
Trigger: CAATGAGTAAATTTCTACCAAGAGTCGGGTTTGCCA...TTGTGTATTACTGAGTCTTGGAGTCATCTCTGAGAGCAAATGTATGTTCCTGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
3UTR-3UTR CAA 90 bp TTCAGGAACATACATTTGCTCTCAGAGATGACTCCAAGACTCAGTAATACACAAAAAAGTAGAGCTATCTaGTTGCTGTCATCTGTCTGG +
Preference number: 3 (lower is better)
Translates to: FRNIHLLSEMTPRLSNTQKSRAI*LLSSVW
Trigger: CCAGACAGATGACAGCAACAAGATAGCTCTACTTTT...TTGTGTATTACTGAGTCTTGGAGTCATCTCTGAGAGCAAATGTATGTTCCTGAA
40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
3UTR-3UTR CAA 90 bp TTAAGTGACTGGGCCAAAGATACCTGGGTCAGCAGTAAATGTAAGAACAAAAAGGTTATTGTTCTGGCTTaGCAAATGCCAGTGCTAAAA +
Preference number: 3 (lower is better)
Translates to: LSDWAKDTWVSSKCKNKKVIVLA*QMPVLK
Trigger: TTTTAGCACTGGCATTTGCAAAGCCAGAACAATAAC...CTTTTTGTTCTTACATTTACTGCTGACCCAGGTATCTTTGGCCCAGTCACTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
3UTR-3UTR CAA 90 bp ATCCACTCTTTAGTAAGTTCGTGGGATCTTGATTGTGGGCAAAATTGGGCTCAATACATTCTTCAGTTATaGTTCTGGCTTTGCAAATGC +
Preference number: 3 (lower is better)
Translates to: IHSLVSSWDLDCGQNWAQYILQL*FWLCKC
Trigger: GCATTTGCAAAGCCAGAACAATAACTGAAGAATGTA...TTGAGCCCAATTTTGCCCACAATCAAGATCCCACGAACTTACTAAAGAGTGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616793.5
3UTR TCA 72 bp TTGCATCATCCACTCTTTAGTAAGTTCGTGGGATCTTaGTTGTGGGCAAAATTGGGCTCAAAGTTGTTTAAC +
Preference number: 3 (lower is better)
Translates to: LHHPLFSKFVGS*LWAKLGSKLFN
Trigger: GTTAAACAACTTTGAGCCCAATTTTGCCCACAATCAAGATCCCACGAACTTACTAAAGAGTGGATGATGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616793.5
3UTR TCA 72 bp GTTGCTATGGTTAATGGCTGGTATAGGCACAGTCTGTaGGATGTCAGTCAAATAGAAGTGTTGTTACTAACA +
Preference number: 3 (lower is better)
Translates to: VAMVNGWYRHSL*DVSQIEVLLLT
Trigger: TGTTAGTAACAACACTTCTATTTGACTGACATCTCACAGACTGTGCCTATACCAGCCATTAACCATAGCAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616793.5
3UTR CCA 72 bp TTCTGTATGATGGCATGCATATGCAATCAAGAGAGCTaGGAGATGCTTATCATAGAAATGACACACTCTTCT +
Preference number: 3 (lower is better)
Translates to: FCMMACICNQES*EMLIIEMTHSS
Trigger: AGAAGAGTGTGTCATTTCTATGATAAGCATCTCCCAGCTCTCTTGATTGCATATGCATGCCATCATACAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
3UTR CCA 72 bp AGTCTGTTTTGTATCTTCCCAGTAGGGCATACCACCTaGCTTTCCTCCAGAATAAAAGATAATCAAGCTAAT +
Preference number: 3 (lower is better)
Translates to: SLFCIFPVGHTT*LSSRIKDNQAN
Trigger: ATTAGCTTGATTATCTTTTATTCTGGAGGAAAGCCAGGTGGTATGCCCTACTGGGAAGATACAAAACAGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
3UTR-3UTR CAA 90 bp CAAACTTTATTTCTCCTATTACTAGTGGAGAACACATTTGCTCTCTACCTAAGTCCTCTTTCACATTTCTaGCCTAATGAGCATATGGCT +
Preference number: 3 (lower is better)
Translates to: QTLFLLLLVENTFALYLSPLSHF*PNEHMA
Trigger: AGCCATATGCTCATTAGGCAAGAAATGTGAAAGAGG...ACTTAGGTAGAGAGCAAATGTGTTCTCCACTAGTAATAGGAGAAATAAAGTTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616793.5
3UTR GCA 72 bp AAAGATAATCAAGCTAATTATGTGATACTGTCAGTTTaGTCCAAGCCTTTGTTTAATGACTGGCTCTCCTGT +
Preference number: 3 (lower is better)
Translates to: KDNQANYVILSV*SKPLFNDWLSC
Trigger: ACAGGAGAGCCAGTCATTAAACAAAGGCTTGGAGCAAACTGACAGTATCACATAATTAGCTTGATTATCTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
3UTR CCA 72 bp TGTCAGTCAAATAGAAGTGTTGTTACTAACAGATGCTaGGGATCTGTTTTAGTTGGAAAATTGCATCATCCA +
Preference number: 3 (lower is better)
Translates to: CQSNRSVVTNRC*GSVLVGKLHHP
Trigger: TGGATGATGCAATTTTCCAACTAAAACAGATCCCCAGCATCTGTTAGTAACAACACTTCTATTTGACTGACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616793.5
3UTR GCA 72 bp TTATTGAGAAAAATTAAGTTAATGAACCCGGAAGAATaGTGTTCTGACTGCTACAAACTCAGTAGCCAAATG +
Preference number: 3 (lower is better)
Translates to: LLRKIKLMNPEE*CSDCYKLSSQM
Trigger: CATTTGGCTACTGAGTTTGTAGCAGTCAGAACAGCATTCTTCCGGGTTCATTAACTTAATTTTTCTCAATAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616793.5
CDS-3UTR TCA 90 bp TGTTGCCCAGGCCGTTATGAAACTCCTGGGCCCAAGCTATCCTGCCACCTTAGCCACAGAGAGCAGACTTaGGCCTCTGGATCTCTCCAT +
Preference number: 4 (lower is better)
Translates to: CCPGRYETPGPKLSCHLSHREQT*ASGSLH
Trigger: ATGGAGAGATCCAGAGGCTCAAGTCTGCTCTCTGTG...GCTAAGGTGGCAGGATAGCTTGGGCCCAGGAGTTTCATAACGGCCTGGGCAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616793.5
CDS-3UTR TCA 90 bp TGTTGCCCAGGCCGTTATGAAACTCCTGGGCCCAAGCTATCCTGCCACCTTAGCGCTTGGAGCTGTTCTTaGGCCTTGGCTTCTCGTTCA +
Preference number: 4 (lower is better)
Translates to: CCPGRYETPGPKLSCHLSAWSCS*ALASRS
Trigger: TGAACGAGAAGCCAAGGCTCAAGAACAGCTCCAAGC...GCTAAGGTGGCAGGATAGCTTGGGCCCAGGAGTTTCATAACGGCCTGGGCAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616793.5
CDS-3UTR TCA 90 bp GGCACAGAGAGGTTAAGTGACTGGGCCAAAGATACCTGGGTCAGCAGTAAATGTCCCGGGCCTCAATGGTaGGCGCTGTCCTTACTTTGT +
Preference number: 4 (lower is better)
Translates to: GTERLSDWAKDTWVSSKCPGPQW*ALSLLC
Trigger: ACAAAGTAAGGACAGCGCTCACCATTGAGGCCCGGG...ACATTTACTGCTGACCCAGGTATCTTTGGCCCAGTCACTTAACCTCTCTGTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp GGCACAGAGAGGTTAAGTGACTGGGCCAAAGATACCTGGGTCAGCAGTAAATGTGCTTCTTGGTGGGACTaGTGCTCACTCCGAAGGTCC +
Preference number: 4 (lower is better)
Translates to: GTERLSDWAKDTWVSSKCASWWD*CSLRRS
Trigger: GGACCTTCGGAGTGAGCATCAGTCCCACCAAGAAGC...ACATTTACTGCTGACCCAGGTATCTTTGGCCCAGTCACTTAACCTCTCTGTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CCA 90 bp TGTTGCCCAGGCCGTTATGAAACTCCTGGGCCCAAGCTATCCTGCCACCTTAGCTCAGCATCTACTGTGTaGTGCTCCTTGGTAAGGTCT +
Preference number: 4 (lower is better)
Translates to: CCPGRYETPGPKLSCHLSSASTV*CSLVRS
Trigger: AGACCTTACCAAGGAGCACCACACAGTAGATGCTGA...GCTAAGGTGGCAGGATAGCTTGGGCCCAGGAGTTTCATAACGGCCTGGGCAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616793.5
CDS-3UTR TCA 90 bp GTCTTCCTGGGATCTTATCCATGTTTTCGGTTACTCTTTAAGAGGCACCTTGACTCTCGGAGGATGGGGTaGGCTCGGAAGCAGCCAGGA +
Preference number: 4 (lower is better)
Translates to: VFLGSYPCFRLLFKRHLDSRRMG*ARKQPG
Trigger: TCCTGGCTGCTTCCGAGCTCACCCCATCCTCCGAGA...GTCAAGGTGCCTCTTAAAGAGTAACCGAAAACATGGATAAGATCCCAGGAAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333010.6
CDS-3UTR TCA 90 bp AGGTGTGTGTTGGAGCAGACGGAATATAGATTTACTCATATGGGCCCTGCAACACTCGTTCAGCGTCGATaGTGCCTCCCGTCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: RCVLEQTEYRFTHMGPATLVQRR*CLPSAP
Trigger: AGGAGCAGACGGGAGGCATCATCGACGCTGAACGAG...TGTTGCAGGGCCCATATGAGTAAATCTATATTCCGTCTGCTCCAACACACACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR GCA 90 bp AGGTGTGTGTTGGAGCAGACGGAATATAGATTTACTCATATGGGCCCTGCAACAGTCACCAGCACCGTGTaGTTGCGCTGCTCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: RCVLEQTEYRFTHMGPATVTSTV*LRCSSS
Trigger: TGAGCTGGAGCAGCGCAAGCACACGGTGCTGGTGAC...TGTTGCAGGGCCCATATGAGTAAATCTATATTCCGTCTGCTCCAACACACACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR GCA 90 bp GGCACAGAGAGGTTAAGTGACTGGGCCAAAGATACCTGGGTCAGCAGTAAATGTTCCTTACTTTGTCACTaGTGCCGTCGCGGAGAGCAC +
Preference number: 4 (lower is better)
Translates to: GTERLSDWAKDTWVSSKCSLLCH*CRRGEH
Trigger: GTGCTCTCCGCGACGGCAGCAGTGACAAAGTAAGGA...ACATTTACTGCTGACCCAGGTATCTTTGGCCCAGTCACTTAACCTCTCTGTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR GCA 90 bp GGCACAGAGAGGTTAAGTGACTGGGCCAAAGATACCTGGGTCAGCAGTAAATGTCATAGGTATTCCTCGTaGTTCACTCCCCACCCACCC +
Preference number: 4 (lower is better)
Translates to: GTERLSDWAKDTWVSSKCHRYSS*FTPHPP
Trigger: GGGTGGGTGGGGAGTGAAGCACGAGGAATACCTATG...ACATTTACTGCTGACCCAGGTATCTTTGGCCCAGTCACTTAACCTCTCTGTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CCA 90 bp TTAATGACTGGCTCTCCTGTGGTAAAAGTGGGGTTCTGTATGATGGCATGCATACTCCCTCTCGGAGGATaGGGTGAGCTCGGAAGCAGC +
Preference number: 4 (lower is better)
Translates to: LMTGSPVVKVGFCMMACILPLGG*GELGSS
Trigger: GCTGCTTCCGAGCTCACCCCATCCTCCGAGAGGGAG...TATGCATGCCATCATACAGAACCCCACTTTTACCACAGGAGAGCCAGTCATTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265272.9
CDS-3UTR CCA 90 bp GTAAAAGTGGGGTTCTGTATGATGGCATGCATATGCAATCAAGAGAGCTGGGAGCCTCAATCGCTGCCCTaGAAGCCCATGCTGAGACCC +
Preference number: 4 (lower is better)
Translates to: VKVGFCMMACICNQESWEPQSLP*KPMLRP
Trigger: GGGTCTCAGCATGGGCTTCCAGGGCAGCGATTGAGG...CTCCCAGCTCTCTTGATTGCATATGCATGCCATCATACAGAACCCCACTTTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp GTAAAAGTGGGGTTCTGTATGATGGCATGCATATGCAATCAAGAGAGCTGGGAGCCTGGAAGCCCATGCTaGGACCCGGAGAAGCTGTTT +
Preference number: 4 (lower is better)
Translates to: VKVGFCMMACICNQESWEPGSPC*DPEKLF
Trigger: AAACAGCTTCTCCGGGTCTCAGCATGGGCTTCCAGG...CTCCCAGCTCTCTTGATTGCATATGCATGCCATCATACAGAACCCCACTTTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp TGTTGCCCAGGCCGTTATGAAACTCCTGGGCCCAAGCTATCCTGCCACCTTAGCCTCTCTTTCAAGCTTTaGTACCTTGGACTTCTCTTG +
Preference number: 4 (lower is better)
Translates to: CCPGRYETPGPKLSCHLSLSFKL*YLGLLL
Trigger: CAAGAGAAGTCCAAGGTATCAAAGCTTGAAAGAGAG...GCTAAGGTGGCAGGATAGCTTGGGCCCAGGAGTTTCATAACGGCCTGGGCAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616793.5
CDS-3UTR TCA 90 bp GGCACAGAGAGGTTAAGTGACTGGGCCAAAGATACCTGGGTCAGCAGTAAATGTTACCTTCACCGTCCTTaGCATTTCCTGCTCGTGCTG +
Preference number: 4 (lower is better)
Translates to: GTERLSDWAKDTWVSSKCYLHRP*HFLLVL
Trigger: CAGCACGAGCAGGAAATGTCAAGGACGGTGAAGGTA...ACATTTACTGCTGACCCAGGTATCTTTGGCCCAGTCACTTAACCTCTCTGTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp AGGTGTGTGTTGGAGCAGACGGAATATAGATTTACTCATATGGGCCCTGCAACACCCGGGCCTCAATGGTaGGCGCTGTCCTTACTTTGT +
Preference number: 4 (lower is better)
Translates to: RCVLEQTEYRFTHMGPATPGPQW*ALSLLC
Trigger: ACAAAGTAAGGACAGCGCTCACCATTGAGGCCCGGG...TGTTGCAGGGCCCATATGAGTAAATCTATATTCCGTCTGCTCCAACACACACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp AGGTGTGTGTTGGAGCAGACGGAATATAGATTTACTCATATGGGCCCTGCAACAGCTTCTTGGTGGGACTaGTGCTCACTCCGAAGGTCC +
Preference number: 4 (lower is better)
Translates to: RCVLEQTEYRFTHMGPATASWWD*CSLRRS
Trigger: GGACCTTCGGAGTGAGCATCAGTCCCACCAAGAAGC...TGTTGCAGGGCCCATATGAGTAAATCTATATTCCGTCTGCTCCAACACACACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp GTAAAAGTGGGGTTCTGTATGATGGCATGCATATGCAATCAAGAGAGCTGGGAGGCTTCTTGGTGGGACTaGTGCTCACTCCGAAGGTCC +
Preference number: 4 (lower is better)
Translates to: VKVGFCMMACICNQESWEASWWD*CSLRRS
Trigger: GGACCTTCGGAGTGAGCATCAGTCCCACCAAGAAGC...CTCCCAGCTCTCTTGATTGCATATGCATGCCATCATACAGAACCCCACTTTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR GCA 90 bp ACTGGCTCTCCTGTGGTAAAAGTGGGGTTCTGTATGATGGCATGCATATGCAATACCGTGTGCTTGCGCTaGTCCAGCTCACGAATCCTC +
Preference number: 4 (lower is better)
Translates to: TGSPVVKVGFCMMACICNTVCLR*SSSRIL
Trigger: GAGGATTCGTGAGCTGGAGCAGCGCAAGCACACGGT...ATTGCATATGCATGCCATCATACAGAACCCCACTTTTACCACAGGAGAGCCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR GCA 90 bp GTCTTCCTGGGATCTTATCCATGTTTTCGGTTACTCTTTAAGAGGCACCTTGACCCAGCACCGTGTGCTTaGGCTGCTCCAGCTCACGAA +
Preference number: 4 (lower is better)
Translates to: VFLGSYPCFRLLFKRHLDPAPCA*AAPAHE
Trigger: TTCGTGAGCTGGAGCAGCGCAAGCACACGGTGCTGG...GTCAAGGTGCCTCTTAAAGAGTAACCGAAAACATGGATAAGATCCCAGGAAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333010.6
ENST00000507386.5
ENST00000616793.5
CDS-3UTR GCA 90 bp GTCTTCCTGGGATCTTATCCATGTTTTCGGTTACTCTTTAAGAGGCACCTTGACGTCACCAGCACCGTGTaGTTGCGCTGCTCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: VFLGSYPCFRLLFKRHLDVTSTV*LRCSSS
Trigger: TGAGCTGGAGCAGCGCAAGCACACGGTGCTGGTGAC...GTCAAGGTGCCTCTTAAAGAGTAACCGAAAACATGGATAAGATCCCAGGAAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333010.6
ENST00000507386.5
ENST00000616793.5
CDS-3UTR GCA 90 bp TCAAGTTGGCTAGTGTTGGGTCACCAACACTGTAGAGGCACCCTCTTTCACATTTCCTTACTTTGTCACTaGTGCCGTCGCGGAGAGCAC +
Preference number: 4 (lower is better)
Translates to: SSWLVLGHQHCRGTLFHISLLCH*CRRGEH
Trigger: GTGCTCTCCGCGACGGCAGCAGTGACAAAGTAAGGA...AATGTGAAAGAGGGTGCCTCTACAGTGTTGGTGACCCAACACTAGCCAACTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR GCA 90 bp TCAAGTTGGCTAGTGTTGGGTCACCAACACTGTAGAGGCACCCTCTTTCACATTAGAGCCTCGTCCACCTaGTTCTTGGCCGTTTTCAGG +
Preference number: 4 (lower is better)
Translates to: SSWLVLGHQHCRGTLFHIRASST*FLAVFR
Trigger: CCTGAAAACGGCCAAGAAGCAGGTGGACGAGGCTCT...AATGTGAAAGAGGGTGCCTCTACAGTGTTGGTGACCCAACACTAGCCAACTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR GCA 90 bp TCAAGTTGGCTAGTGTTGGGTCACCAACACTGTAGAGGCACCCTCTTTCACATTCCAGGGACAGCACAGTaGTGGCCTGAATTATGGCCA +
Preference number: 4 (lower is better)
Translates to: SSWLVLGHQHCRGTLFHIPGTAQ*WPELWP
Trigger: TGGCCATAATTCAGGCCAGCACTGTGCTGTCCCTGG...AATGTGAAAGAGGGTGCCTCTACAGTGTTGGTGACCCAACACTAGCCAACTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR GCA 90 bp TCAAGTTGGCTAGTGTTGGGTCACCAACACTGTAGAGGCACCCTCTTTCACATTCTGGATCCACTTCTCTaGCAGGGACAGCACAGTGCT +
Preference number: 4 (lower is better)
Translates to: SSWLVLGHQHCRGTLFHILDPLL*QGQHSA
Trigger: AGCACTGTGCTGTCCCTGGCAGAGAAGTGGATCCAG...AATGTGAAAGAGGGTGCCTCTACAGTGTTGGTGACCCAACACTAGCCAACTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR GCA 90 bp GGCACAGAGAGGTTAAGTGACTGGGCCAAAGATACCTGGGTCAGCAGTAAATGTCCGAGATTGTGCCAATaGACTCCAGCATGGGCAACA +
Preference number: 4 (lower is better)
Translates to: GTERLSDWAKDTWVSSKCPRLCQ*TPAWAT
Trigger: TGTTGCCCATGCTGGAGTGCATTGGCACAATCTCGG...ACATTTACTGCTGACCCAGGTATCTTTGGCCCAGTCACTTAACCTCTCTGTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR GCA 90 bp AGGTGTGTGTTGGAGCAGACGGAATATAGATTTACTCATATGGGCCCTGCAACACCAGGAGGTGGAGCTTaGCATGAGCCGAGATTGTGC +
Preference number: 4 (lower is better)
Translates to: RCVLEQTEYRFTHMGPATPGGGA*HEPRLC
Trigger: GCACAATCTCGGCTCATGGCAAGCTCCACCTCCTGG...TGTTGCAGGGCCCATATGAGTAAATCTATATTCCGTCTGCTCCAACACACACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CCA 90 bp GGCACAGAGAGGTTAAGTGACTGGGCCAAAGATACCTGGGTCAGCAGTAAATGTGCTCCTTCAATCTGCTaGATCCACTTCTCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: GTERLSDWAKDTWVSSKCAPSIC*IHFSAR
Trigger: CCTGGCAGAGAAGTGGATCCAGCAGATTGAAGGAGC...ACATTTACTGCTGACCCAGGTATCTTTGGCCCAGTCACTTAACCTCTCTGTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp TTAATGACTGGCTCTCCTGTGGTAAAAGTGGGGTTCTGTATGATGGCATGCATACCTGGAAGCCCATGCTaGGACCCGGAGAAGCTGTTT +
Preference number: 4 (lower is better)
Translates to: LMTGSPVVKVGFCMMACIPGSPC*DPEKLF
Trigger: AAACAGCTTCTCCGGGTCTCAGCATGGGCTTCCAGG...TATGCATGCCATCATACAGAACCCCACTTTTACCACAGGAGAGCCAGTCATTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp GTCTTCCTGGGATCTTATCCATGTTTTCGGTTACTCTTTAAGAGGCACCTTGACCTTGAAGGGCAACAATaGGTGCCTCGGGCTTCTCGC +
Preference number: 4 (lower is better)
Translates to: VFLGSYPCFRLLFKRHLDLEGQQ*VPRASR
Trigger: GCGAGAAGCCCGAGGCACTCATTGTTGCCCTTCAAG...GTCAAGGTGCCTCTTAAAGAGTAACCGAAAACATGGATAAGATCCCAGGAAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp GTCTTCCTGGGATCTTATCCATGTTTTCGGTTACTCTTTAAGAGGCACCTTGACGAATCCTGCCCTTTCTaGGCCAGAGTCGCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: VFLGSYPCFRLLFKRHLDESCPF*ARVASR
Trigger: CCTGGAAGCGACTCTGGCTCAGAAAGGGCAGGATTC...GTCAAGGTGCCTCTTAAAGAGTAACCGAAAACATGGATAAGATCCCAGGAAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333010.6
ENST00000616793.5
CDS-3UTR TCA 90 bp GGCACAGAGAGGTTAAGTGACTGGGCCAAAGATACCTGGGTCAGCAGTAAATGTATCTTCTACCCAGTGTaGATCCTGCCCTTTCTGAGC +
Preference number: 4 (lower is better)
Translates to: GTERLSDWAKDTWVSSKCIFYPV*ILPFLS
Trigger: GCTCAGAAAGGGCAGGATTCACACTGGGTAGAAGAT...ACATTTACTGCTGACCCAGGTATCTTTGGCCCAGTCACTTAACCTCTCTGTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265272.9
ENST00000616793.5
CDS-3UTR GCA 90 bp GTAAAAGTGGGGTTCTGTATGATGGCATGCATATGCAATCAAGAGAGCTGGGAGTGTGACCGAGTCGGATaGAGCCTCCGAACCCAACAT +
Preference number: 4 (lower is better)
Translates to: VKVGFCMMACICNQESWECDRVG*SLRTQH
Trigger: ATGTTGGGTTCGGAGGCTGCATCCGACTCGGTCACA...CTCCCAGCTCTCTTGATTGCATATGCATGCCATCATACAGAACCCCACTTTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265272.9
ENST00000616793.5
CDS-3UTR GCA 90 bp GTCTTCCTGGGATCTTATCCATGTTTTCGGTTACTCTTTAAGAGGCACCTTGACACCGTGTGCTTGCGCTaGTCCAGCTCACGAATCCTC +
Preference number: 4 (lower is better)
Translates to: VFLGSYPCFRLLFKRHLDTVCLR*SSSRIL
Trigger: GAGGATTCGTGAGCTGGAGCAGCGCAAGCACACGGT...GTCAAGGTGCCTCTTAAAGAGTAACCGAAAACATGGATAAGATCCCAGGAAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333010.6
ENST00000507386.5
ENST00000616793.5
CDS-3UTR GCA 90 bp AAGGAAGCATCGAATCTGCTTTTATTTCACATGTCACATTCGCTCGGGTCCTTTCCAGCACCGTGTGCTTaGGCTGCTCCAGCTCACGAA +
Preference number: 4 (lower is better)
Translates to: KEASNLLLFHMSHSLGSFPAPCA*AAPAHE
Trigger: TTCGTGAGCTGGAGCAGCGCAAGCACACGGTGCTGG...AAAGGACCCGAGCGAATGTGACATGTGAAATAAAAGCAGATTCGATGCTTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR GCA 90 bp ATCCACTCTTTAGTAAGTTCGTGGGATCTTGATTGTGGGCAAAATTGGGCTCAACCAGCACCGTGTGCTTaGGCTGCTCCAGCTCACGAA +
Preference number: 4 (lower is better)
Translates to: IHSLVSSWDLDCGQNWAQPAPCA*AAPAHE
Trigger: TTCGTGAGCTGGAGCAGCGCAAGCACACGGTGCTGG...TTGAGCCCAATTTTGCCCACAATCAAGATCCCACGAACTTACTAAAGAGTGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616793.5
CDS-3UTR GCA 90 bp ACTGGCTCTCCTGTGGTAAAAGTGGGGTTCTGTATGATGGCATGCATATGCAATCATAGGTATTCCTCGTaGTTCACTCCCCACCCACCC +
Preference number: 4 (lower is better)
Translates to: TGSPVVKVGFCMMACICNHRYSS*FTPHPP
Trigger: GGGTGGGTGGGGAGTGAAGCACGAGGAATACCTATG...ATTGCATATGCATGCCATCATACAGAACCCCACTTTTACCACAGGAGAGCCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR GCA 90 bp TGTTGCCCAGGCCGTTATGAAACTCCTGGGCCCAAGCTATCCTGCCACCTTAGCTTCTGTATGATGGCATaGATATGCAATCAAGAGAGC +
Preference number: 4 (lower is better)
Translates to: CCPGRYETPGPKLSCHLSFCMMA*ICNQES
Trigger: GCTCTCTTGATTGCATATGCATGCCATCATACAGAA...GCTAAGGTGGCAGGATAGCTTGGGCCCAGGAGTTTCATAACGGCCTGGGCAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616793.5
CDS-3UTR GCA 90 bp ACTGGCTCTCCTGTGGTAAAAGTGGGGTTCTGTATGATGGCATGCATATGCAATGGGCCCAAGCTATCCTaGCACCTTAGCCTTCTGAGT +
Preference number: 4 (lower is better)
Translates to: TGSPVVKVGFCMMACICNGPKLS*HLSLLS
Trigger: ACTCAGAAGGCTAAGGTGGCAGGATAGCTTGGGCCC...ATTGCATATGCATGCCATCATACAGAACCCCACTTTTACCACAGGAGAGCCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616793.5
CDS-3UTR TCA 90 bp GAGGCTCATGAGCAAGAGTTGGTAAAAATTACAGTTCAGTCTATAGTCTTGAGATCTCGGAGGATGGGGTaGGCTCGGAAGCAGCCAGGA +
Preference number: 4 (lower is better)
Translates to: EAHEQELVKITVQSIVLRSRRMG*ARKQPG
Trigger: TCCTGGCTGCTTCCGAGCTCACCCCATCCTCCGAGA...TCTCAAGACTATAGACTGAACTGTAATTTTTACCAACTCTTGCTCATGAGCCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265272.9
CDS-3UTR TCA 90 bp AGGTGTGTGTTGGAGCAGACGGAATATAGATTTACTCATATGGGCCCTGCAACATACCTTCACCGTCCTTaGCATTTCCTGCTCGTGCTG +
Preference number: 4 (lower is better)
Translates to: RCVLEQTEYRFTHMGPATYLHRP*HFLLVL
Trigger: CAGCACGAGCAGGAAATGTCAAGGACGGTGAAGGTA...TGTTGCAGGGCCCATATGAGTAAATCTATATTCCGTCTGCTCCAACACACACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp ACTGGCTCTCCTGTGGTAAAAGTGGGGTTCTGTATGATGGCATGCATATGCAATGCTCCGACTCCCACTTaGTCTTCGAGATGGCTTCTT +
Preference number: 4 (lower is better)
Translates to: TGSPVVKVGFCMMACICNAPTPT*SSRWLL
Trigger: AAGAAGCCATCTCGAAGATCAAGTGGGAGTCGGAGC...ATTGCATATGCATGCCATCATACAGAACCCCACTTTTACCACAGGAGAGCCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp TTAAGTGACTGGGCCAAAGATACCTGGGTCAGCAGTAAATGTAAGAACAAAAAGCTCGTTCAGCGTCGATaGTGCCTCCCGTCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: LSDWAKDTWVSSKCKNKKLVQRR*CLPSAP
Trigger: AGGAGCAGACGGGAGGCATCATCGACGCTGAACGAG...CTTTTTGTTCTTACATTTACTGCTGACCCAGGTATCTTTGGCCCAGTCACTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp ACTGGCTCTCCTGTGGTAAAAGTGGGGTTCTGTATGATGGCATGCATATGCAATGCTTGGAGCTGTTCTTaGGCCTTGGCTTCTCGTTCA +
Preference number: 4 (lower is better)
Translates to: TGSPVVKVGFCMMACICNAWSCS*ALASRS
Trigger: TGAACGAGAAGCCAAGGCTCAAGAACAGCTCCAAGC...ATTGCATATGCATGCCATCATACAGAACCCCACTTTTACCACAGGAGAGCCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp AAGGAAGCATCGAATCTGCTTTTATTTCACATGTCACATTCGCTCGGGTCCTTTGAATCCTGCCCTTTCTaGGCCAGAGTCGCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: KEASNLLLFHMSHSLGSFESCPF*ARVASR
Trigger: CCTGGAAGCGACTCTGGCTCAGAAAGGGCAGGATTC...AAAGGACCCGAGCGAATGTGACATGTGAAATAAAAGCAGATTCGATGCTTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265272.9
ENST00000616793.5
CDS-3UTR TCA 90 bp AGGTGTGTGTTGGAGCAGACGGAATATAGATTTACTCATATGGGCCCTGCAACAGGCAGGAGAATCACTTaGATCCAGGAGGTGGAGCTT +
Preference number: 4 (lower is better)
Translates to: RCVLEQTEYRFTHMGPATGRRIT*IQEVEL
Trigger: AAGCTCCACCTCCTGGATTCAAGTGATTCTCCTGCC...TGTTGCAGGGCCCATATGAGTAAATCTATATTCCGTCTGCTCCAACACACACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp ACTGGCTCTCCTGTGGTAAAAGTGGGGTTCTGTATGATGGCATGCATATGCAATGACAGCAAAGGATTGTaGATCTGCCCTGCCCCATTC +
Preference number: 4 (lower is better)
Translates to: TGSPVVKVGFCMMACICNDSKGL*ICPAPF
Trigger: GAATGGGGCAGGGCAGATTCACAATCCTTTGCTGTC...ATTGCATATGCATGCCATCATACAGAACCCCACTTTTACCACAGGAGAGCCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000616793.5
CDS-3UTR GCA 90 bp GTCTTCCTGGGATCTTATCCATGTTTTCGGTTACTCTTTAAGAGGCACCTTGACTGTGACCGAGTCGGATaGAGCCTCCGAACCCAACAT +
Preference number: 4 (lower is better)
Translates to: VFLGSYPCFRLLFKRHLDCDRVG*SLRTQH
Trigger: ATGTTGGGTTCGGAGGCTGCATCCGACTCGGTCACA...GTCAAGGTGCCTCTTAAAGAGTAACCGAAAACATGGATAAGATCCCAGGAAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333010.6
ENST00000616793.5
CDS-3UTR GCA 90 bp GTCTTCCTGGGATCTTATCCATGTTTTCGGTTACTCTTTAAGAGGCACCTTGACAAGGGCAACAATGAGTaGCTCGGGCTTCTCGCCCTT +
Preference number: 4 (lower is better)
Translates to: VFLGSYPCFRLLFKRHLDKGNNE*LGLLAL
Trigger: AAGGGCGAGAAGCCCGAGGCACTCATTGTTGCCCTT...GTCAAGGTGCCTCTTAAAGAGTAACCGAAAACATGGATAAGATCCCAGGAAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507386.5
ENST00000616793.5
CDS-3UTR GCA 90 bp TTAATGACTGGCTCTCCTGTGGTAAAAGTGGGGTTCTGTATGATGGCATGCATAAAGGGCAACAATGAGTaGCTCGGGCTTCTCGCCCTT +
Preference number: 4 (lower is better)
Translates to: LMTGSPVVKVGFCMMACIKGNNE*LGLLAL
Trigger: AAGGGCGAGAAGCCCGAGGCACTCATTGTTGCCCTT...TATGCATGCCATCATACAGAACCCCACTTTTACCACAGGAGAGCCAGTCATTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR GCA 90 bp AGGTGTGTGTTGGAGCAGACGGAATATAGATTTACTCATATGGGCCCTGCAACATTACTTTGTCACTGCTaGCGTCGCGGAGAGCACAGA +
Preference number: 4 (lower is better)
Translates to: RCVLEQTEYRFTHMGPATLLCHC*RRGEHR
Trigger: TCTGTGCTCTCCGCGACGGCAGCAGTGACAAAGTAA...TGTTGCAGGGCCCATATGAGTAAATCTATATTCCGTCTGCTCCAACACACACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR GCA 90 bp GTCTTCCTGGGATCTTATCCATGTTTTCGGTTACTCTTTAAGAGGCACCTTGACTCCTTACTTTGTCACTaGTGCCGTCGCGGAGAGCAC +
Preference number: 4 (lower is better)
Translates to: VFLGSYPCFRLLFKRHLDSLLCH*CRRGEH
Trigger: GTGCTCTCCGCGACGGCAGCAGTGACAAAGTAAGGA...GTCAAGGTGCCTCTTAAAGAGTAACCGAAAACATGGATAAGATCCCAGGAAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333010.6
ENST00000507386.5
ENST00000616793.5
CDS-3UTR GCA 90 bp GGCACAGAGAGGTTAAGTGACTGGGCCAAAGATACCTGGGTCAGCAGTAAATGTTTTCTCGTTTTGGGCTaGTCATGTTGCACTCAGCCT +
Preference number: 4 (lower is better)
Translates to: GTERLSDWAKDTWVSSKCFLVLG*SCCTQP
Trigger: AGGCTGAGTGCAACATGAGCAGCCCAAAACGAGAAA...ACATTTACTGCTGACCCAGGTATCTTTGGCCCAGTCACTTAACCTCTCTGTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR GCA 90 bp ACTGGCTCTCCTGTGGTAAAAGTGGGGTTCTGTATGATGGCATGCATATGCAATATGATGCCTCCCGTCTaGTCCTGTAGGAGGGCATAT +
Preference number: 4 (lower is better)
Translates to: TGSPVVKVGFCMMACICNMMPPV*SCRRAY
Trigger: ATATGCCCTCCTACAGGAGCAGACGGGAGGCATCAT...ATTGCATATGCATGCCATCATACAGAACCCCACTTTTACCACAGGAGAGCCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR GCA 90 bp GGCACAGAGAGGTTAAGTGACTGGGCCAAAGATACCTGGGTCAGCAGTAAATGTGACAGTCATACTCTCTaGTCTTCCTCAGCATTTGCC +
Preference number: 4 (lower is better)
Translates to: GTERLSDWAKDTWVSSKCDSHTL*SSSAFA
Trigger: GGCAAATGCTGAGGAAGAGCAGAGAGTATGACTGTC...ACATTTACTGCTGACCCAGGTATCTTTGGCCCAGTCACTTAACCTCTCTGTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR GCA 90 bp GTCTTCCTGGGATCTTATCCATGTTTTCGGTTACTCTTTAAGAGGCACCTTGACCATAGGTATTCCTCGTaGTTCACTCCCCACCCACCC +
Preference number: 4 (lower is better)
Translates to: VFLGSYPCFRLLFKRHLDHRYSS*FTPHPP
Trigger: GGGTGGGTGGGGAGTGAAGCACGAGGAATACCTATG...GTCAAGGTGCCTCTTAAAGAGTAACCGAAAACATGGATAAGATCCCAGGAAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507386.5
ENST00000616793.5
CDS-3UTR GCA 90 bp ACTGGCTCTCCTGTGGTAAAAGTGGGGTTCTGTATGATGGCATGCATATGCAATCATGAGCCGAGATTGTaGCAATGCACTCCAGCATGG +
Preference number: 4 (lower is better)
Translates to: TGSPVVKVGFCMMACICNHEPRL*QCTPAW
Trigger: CCATGCTGGAGTGCATTGGCACAATCTCGGCTCATG...ATTGCATATGCATGCCATCATACAGAACCCCACTTTTACCACAGGAGAGCCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CCA 90 bp TTAAGTGACTGGGCCAAAGATACCTGGGTCAGCAGTAAATGTAAGAACAAAAAGAGCAGCATCACCAGTTaGGCCTCCTCCCTCTCGGAG +
Preference number: 4 (lower is better)
Translates to: LSDWAKDTWVSSKCKNKKSSITS*ASSLSE
Trigger: CTCCGAGAGGGAGGAGGCCCAACTGGTGATGCTGCT...CTTTTTGTTCTTACATTTACTGCTGACCCAGGTATCTTTGGCCCAGTCACTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265272.9
ENST00000616793.5
CDS-3UTR CCA 90 bp ACTGGCTCTCCTGTGGTAAAAGTGGGGTTCTGTATGATGGCATGCATATGCAATGCAGACTTGAGCCTCTaGATCTCTCCATCACGTACC +
Preference number: 4 (lower is better)
Translates to: TGSPVVKVGFCMMACICNADLSL*ISPSRT
Trigger: GGTACGTGATGGAGAGATCCAGAGGCTCAAGTCTGC...ATTGCATATGCATGCCATCATACAGAACCCCACTTTTACCACAGGAGAGCCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp GTAAAAGTGGGGTTCTGTATGATGGCATGCATATGCAATCAAGAGAGCTGGGAGAATCCATTTTCCTTGTaGCCGAGTCGGATGCAGCCT +
Preference number: 4 (lower is better)
Translates to: VKVGFCMMACICNQESWENPFSL*PSRMQP
Trigger: AGGCTGCATCCGACTCGGTCACAAGGAAAATGGATT...CTCCCAGCTCTCTTGATTGCATATGCATGCCATCATACAGAACCCCACTTTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp ATGAATGAGATCAGTCCATTGTTGATAGAGGAATGCAGATGTGAGAGTAGGACACTTGAAGGGCAACAATaGGTGCCTCGGGCTTCTCGC +
Preference number: 4 (lower is better)
Translates to: MNEISPLLIEECRCESRTLEGQQ*VPRASR
Trigger: GCGAGAAGCCCGAGGCACTCATTGTTGCCCTTCAAG...TGTCCTACTCTCACATCTGCATTCCTCTATCAACAATGGACTGATCTCATTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp GTCTTCCTGGGATCTTATCCATGTTTTCGGTTACTCTTTAAGAGGCACCTTGACTACCTTCACCGTCCTTaGCATTTCCTGCTCGTGCTG +
Preference number: 4 (lower is better)
Translates to: VFLGSYPCFRLLFKRHLDYLHRP*HFLLVL
Trigger: CAGCACGAGCAGGAAATGTCAAGGACGGTGAAGGTA...GTCAAGGTGCCTCTTAAAGAGTAACCGAAAACATGGATAAGATCCCAGGAAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333010.6
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp GTCTTCCTGGGATCTTATCCATGTTTTCGGTTACTCTTTAAGAGGCACCTTGACCACAGAGAGCAGACTTaGGCCTCTGGATCTCTCCAT +
Preference number: 4 (lower is better)
Translates to: VFLGSYPCFRLLFKRHLDHREQT*ASGSLH
Trigger: ATGGAGAGATCCAGAGGCTCAAGTCTGCTCTCTGTG...GTCAAGGTGCCTCTTAAAGAGTAACCGAAAACATGGATAAGATCCCAGGAAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333010.6
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp TTAATGACTGGCTCTCCTGTGGTAAAAGTGGGGTTCTGTATGATGGCATGCATAGCTCCGACTCCCACTTaGTCTTCGAGATGGCTTCTT +
Preference number: 4 (lower is better)
Translates to: LMTGSPVVKVGFCMMACIAPTPT*SSRWLL
Trigger: AAGAAGCCATCTCGAAGATCAAGTGGGAGTCGGAGC...TATGCATGCCATCATACAGAACCCCACTTTTACCACAGGAGAGCCAGTCATTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp AGGTGTGTGTTGGAGCAGACGGAATATAGATTTACTCATATGGGCCCTGCAACATCCTGTCCTTGGCTTTaGTTTCATCCATCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: RCVLEQTEYRFTHMGPATSCPWL*FHPSAS
Trigger: GGAGGCTGATGGATGAAATCAAAGCCAAGGACAGGA...TGTTGCAGGGCCCATATGAGTAAATCTATATTCCGTCTGCTCCAACACACACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp ACTGGCTCTCCTGTGGTAAAAGTGGGGTTCTGTATGATGGCATGCATATGCAATGCTTTCTTCTACGGATaGGCTTTTCTCGGTCCCTTG +
Preference number: 4 (lower is better)
Translates to: TGSPVVKVGFCMMACICNAFFYG*AFLGPL
Trigger: CAAGGGACCGAGAAAAGCTCATCCGTAGAAGAAAGC...ATTGCATATGCATGCCATCATACAGAACCCCACTTTTACCACAGGAGAGCCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp AGGTGTGTGTTGGAGCAGACGGAATATAGATTTACTCATATGGGCCCTGCAACAGCTTTCTTCTACGGATaGGCTTTTCTCGGTCCCTTG +
Preference number: 4 (lower is better)
Translates to: RCVLEQTEYRFTHMGPATAFFYG*AFLGPL
Trigger: CAAGGGACCGAGAAAAGCTCATCCGTAGAAGAAAGC...TGTTGCAGGGCCCATATGAGTAAATCTATATTCCGTCTGCTCCAACACACACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp AGGTGTGTGTTGGAGCAGACGGAATATAGATTTACTCATATGGGCCCTGCAACAAGCACAGTGCTGGCCTaGATTATGGCCACTTGTTCT +
Preference number: 4 (lower is better)
Translates to: RCVLEQTEYRFTHMGPATSTVLA*IMATCS
Trigger: AGAACAAGTGGCCATAATTCAGGCCAGCACTGTGCT...TGTTGCAGGGCCCATATGAGTAAATCTATATTCCGTCTGCTCCAACACACACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp ACTGGCTCTCCTGTGGTAAAAGTGGGGTTCTGTATGATGGCATGCATATGCAATCTGTCGTCTGTGGAATaGATTCCACAAGCTCCACCT +
Preference number: 4 (lower is better)
Translates to: TGSPVVKVGFCMMACICNLSSVE*IPQAPP
Trigger: AGGTGGAGCTTGTGGAATTCATTCCACAGACGACAG...ATTGCATATGCATGCCATCATACAGAACCCCACTTTTACCACAGGAGAGCCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp GTAAAAGTGGGGTTCTGTATGATGGCATGCATATGCAATCAAGAGAGCTGGGAGCACAGAGAGGTTAAGTaGCTGGGCCAAAGATACCTG +
Preference number: 4 (lower is better)
Translates to: VKVGFCMMACICNQESWEHREVK*LGQRYL
Trigger: CAGGTATCTTTGGCCCAGTCACTTAACCTCTCTGTG...CTCCCAGCTCTCTTGATTGCATATGCATGCCATCATACAGAACCCCACTTTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp TCAAGTTGGCTAGTGTTGGGTCACCAACACTGTAGAGGCACCCTCTTTCACATTCCATGGATCCATGAGTaGCTGGAACACATATCCACA +
Preference number: 4 (lower is better)
Translates to: SSWLVLGHQHCRGTLFHIPWIHE*LEHIST
Trigger: TGTGGATATGTGTTCCAGTCACTCATGGATCCATGG...AATGTGAAAGAGGGTGCCTCTACAGTGTTGGTGACCCAACACTAGCCAACTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp ATGAATGAGATCAGTCCATTGTTGATAGAGGAATGCAGATGTGAGAGTAGGACATTGCCCAGGCCGTTATaGAACTCCTGGGCCCAAGCT +
Preference number: 4 (lower is better)
Translates to: MNEISPLLIEECRCESRTLPRPL*NSWAQA
Trigger: AGCTTGGGCCCAGGAGTTTCATAACGGCCTGGGCAA...TGTCCTACTCTCACATCTGCATTCCTCTATCAACAATGGACTGATCTCATTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616793.5
CDS-3UTR GCA 90 bp GTAAAAGTGGGGTTCTGTATGATGGCATGCATATGCAATCAAGAGAGCTGGGAGGCATCTACTGTGTGGTaGTCCTTGGTAAGGTCTCCT +
Preference number: 4 (lower is better)
Translates to: VKVGFCMMACICNQESWEASTVW*SLVRSP
Trigger: AGGAGACCTTACCAAGGAGCACCACACAGTAGATGC...CTCCCAGCTCTCTTGATTGCATATGCATGCCATCATACAGAACCCCACTTTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR GCA 90 bp AATTTTGCCATCTTTGAAGGTTTAGAAGCACTTGTCTTCCTGGGATCTTATCCACCAGCACCGTGTGCTTaGGCTGCTCCAGCTCACGAA +
Preference number: 4 (lower is better)
Translates to: NFAIFEGLEALVFLGSYPPAPCA*AAPAHE
Trigger: TTCGTGAGCTGGAGCAGCGCAAGCACACGGTGCTGG...TGGATAAGATCCCAGGAAGACAAGTGCTTCTAAACCTTCAAAGATGGCAAAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333010.6
ENST00000507386.5
ENST00000616793.5
CDS-3UTR GCA 90 bp AAGGAAGCATCGAATCTGCTTTTATTTCACATGTCACATTCGCTCGGGTCCTTTAGAGCCTCGTCCACCTaGTTCTTGGCCGTTTTCAGG +
Preference number: 4 (lower is better)
Translates to: KEASNLLLFHMSHSLGSFRASST*FLAVFR
Trigger: CCTGAAAACGGCCAAGAAGCAGGTGGACGAGGCTCT...AAAGGACCCGAGCGAATGTGACATGTGAAATAAAAGCAGATTCGATGCTTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR GCA 90 bp ACTGGCTCTCCTGTGGTAAAAGTGGGGTTCTGTATGATGGCATGCATATGCAATCTGCTTGGATCATATTaGTCAGAGCCTCGTCCACCT +
Preference number: 4 (lower is better)
Translates to: TGSPVVKVGFCMMACICNLLGSY*SEPRPP
Trigger: AGGTGGACGAGGCTCTGAGCAATATGATCCAAGCAG...ATTGCATATGCATGCCATCATACAGAACCCCACTTTTACCACAGGAGAGCCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR GCA 90 bp TGCTTTTATTTCACATGTCACATTCGCTCGGGTCCTTTGACTTCGTTACCAGTTCTGGATCCACTTCTCTaGCAGGGACAGCACAGTGCT +
Preference number: 4 (lower is better)
Translates to: CFYFTCHIRSGPLTSLPVLDPLL*QGQHSA
Trigger: AGCACTGTGCTGTCCCTGGCAGAGAAGTGGATCCAG...AACTGGTAACGAAGTCAAAGGACCCGAGCGAATGTGACATGTGAAATAAAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR GCA 90 bp TTAAGTGACTGGGCCAAAGATACCTGGGTCAGCAGTAAATGTAAGAACAAAAAGCCAGGAGGTGGAGCTTaGCATGAGCCGAGATTGTGC +
Preference number: 4 (lower is better)
Translates to: LSDWAKDTWVSSKCKNKKPGGGA*HEPRLC
Trigger: GCACAATCTCGGCTCATGGCAAGCTCCACCTCCTGG...CTTTTTGTTCTTACATTTACTGCTGACCCAGGTATCTTTGGCCCAGTCACTTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR GCA 90 bp TGTTGCCCAGGCCGTTATGAAACTCCTGGGCCCAAGCTATCCTGCCACCTTAGCATCTTCTTGCCAATATaGCTGAAATTAGATCTCAAG +
Preference number: 4 (lower is better)
Translates to: CCPGRYETPGPKLSCHLSIFLPI*LKLDLK
Trigger: CTTGAGATCTAATTTCAGGCATATTGGCAAGAAGAT...GCTAAGGTGGCAGGATAGCTTGGGCCCAGGAGTTTCATAACGGCCTGGGCAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616793.5
CDS-3UTR CCA 90 bp TTCAGGAACATACATTTGCTCTCAGAGATGACTCCAAGACTCAGTAATACACAAAGCAGCATCACCAGTTaGGCCTCCTCCCTCTCGGAG +
Preference number: 4 (lower is better)
Translates to: FRNIHLLSEMTPRLSNTQSSITS*ASSLSE
Trigger: CTCCGAGAGGGAGGAGGCCCAACTGGTGATGCTGCT...TTGTGTATTACTGAGTCTTGGAGTCATCTCTGAGAGCAAATGTATGTTCCTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265272.9
ENST00000616793.5
CDS-3UTR CCA 90 bp AATTTTGCCATCTTTGAAGGTTTAGAAGCACTTGTCTTCCTGGGATCTTATCCAAGCAGCATCACCAGTTaGGCCTCCTCCCTCTCGGAG +
Preference number: 4 (lower is better)
Translates to: NFAIFEGLEALVFLGSYPSSITS*ASSLSE
Trigger: CTCCGAGAGGGAGGAGGCCCAACTGGTGATGCTGCT...TGGATAAGATCCCAGGAAGACAAGTGCTTCTAAACCTTCAAAGATGGCAAAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333010.6
ENST00000616793.5
CDS-3UTR CCA 90 bp AATTTTGCCATCTTTGAAGGTTTAGAAGCACTTGTCTTCCTGGGATCTTATCCACCTCAATCGCTGCCCTaGAAGCCCATGCTGAGACCC +
Preference number: 4 (lower is better)
Translates to: NFAIFEGLEALVFLGSYPPQSLP*KPMLRP
Trigger: GGGTCTCAGCATGGGCTTCCAGGGCAGCGATTGAGG...TGGATAAGATCCCAGGAAGACAAGTGCTTCTAAACCTTCAAAGATGGCAAAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CCA 90 bp GTCTTCCTGGGATCTTATCCATGTTTTCGGTTACTCTTTAAGAGGCACCTTGACGCAGACTTGAGCCTCTaGATCTCTCCATCACGTACC +
Preference number: 4 (lower is better)
Translates to: VFLGSYPCFRLLFKRHLDADLSL*ISPSRT
Trigger: GGTACGTGATGGAGAGATCCAGAGGCTCAAGTCTGC...GTCAAGGTGCCTCTTAAAGAGTAACCGAAAACATGGATAAGATCCCAGGAAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333010.6
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CCA 90 bp TCAAGTTGGCTAGTGTTGGGTCACCAACACTGTAGAGGCACCCTCTTTCACATTATCACCTGCCCTTCCTaGAATTTCTCGTTTTGGGCT +
Preference number: 4 (lower is better)
Translates to: SSWLVLGHQHCRGTLFHIITCPS*NFSFWA
Trigger: AGCCCAAAACGAGAAATTCCAGGAAGGGCAGGTGAT...AATGTGAAAGAGGGTGCCTCTACAGTGTTGGTGACCCAACACTAGCCAACTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp GTCTTCCTGGGATCTTATCCATGTTTTCGGTTACTCTTTAAGAGGCACCTTGACAATCCATTTTCCTTGTaGCCGAGTCGGATGCAGCCT +
Preference number: 4 (lower is better)
Translates to: VFLGSYPCFRLLFKRHLDNPFSL*PSRMQP
Trigger: AGGCTGCATCCGACTCGGTCACAAGGAAAATGGATT...GTCAAGGTGCCTCTTAAAGAGTAACCGAAAACATGGATAAGATCCCAGGAAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333010.6
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp TTCAGGAACATACATTTGCTCTCAGAGATGACTCCAAGACTCAGTAATACACAACCTGGAAGCCCATGCTaGGACCCGGAGAAGCTGTTT +
Preference number: 4 (lower is better)
Translates to: FRNIHLLSEMTPRLSNTQPGSPC*DPEKLF
Trigger: AAACAGCTTCTCCGGGTCTCAGCATGGGCTTCCAGG...TTGTGTATTACTGAGTCTTGGAGTCATCTCTGAGAGCAAATGTATGTTCCTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp TGCTTTTATTTCACATGTCACATTCGCTCGGGTCCTTTGACTTCGTTACCAGTTCACAGAGAGCAGACTTaGGCCTCTGGATCTCTCCAT +
Preference number: 4 (lower is better)
Translates to: CFYFTCHIRSGPLTSLPVHREQT*ASGSLH
Trigger: ATGGAGAGATCCAGAGGCTCAAGTCTGCTCTCTGTG...AACTGGTAACGAAGTCAAAGGACCCGAGCGAATGTGACATGTGAAATAAAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp AATTTTGCCATCTTTGAAGGTTTAGAAGCACTTGTCTTCCTGGGATCTTATCCACCCGGGCCTCAATGGTaGGCGCTGTCCTTACTTTGT +
Preference number: 4 (lower is better)
Translates to: NFAIFEGLEALVFLGSYPPGPQW*ALSLLC
Trigger: ACAAAGTAAGGACAGCGCTCACCATTGAGGCCCGGG...TGGATAAGATCCCAGGAAGACAAGTGCTTCTAAACCTTCAAAGATGGCAAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333010.6
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp AATTTTGCCATCTTTGAAGGTTTAGAAGCACTTGTCTTCCTGGGATCTTATCCAGCTTCTTGGTGGGACTaGTGCTCACTCCGAAGGTCC +
Preference number: 4 (lower is better)
Translates to: NFAIFEGLEALVFLGSYPASWWD*CSLRRS
Trigger: GGACCTTCGGAGTGAGCATCAGTCCCACCAAGAAGC...TGGATAAGATCCCAGGAAGACAAGTGCTTCTAAACCTTCAAAGATGGCAAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333010.6
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp GTCTTCCTGGGATCTTATCCATGTTTTCGGTTACTCTTTAAGAGGCACCTTGACTCCTGTCCTTGGCTTTaGTTTCATCCATCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: VFLGSYPCFRLLFKRHLDSCPWL*FHPSAS
Trigger: GGAGGCTGATGGATGAAATCAAAGCCAAGGACAGGA...GTCAAGGTGCCTCTTAAAGAGTAACCGAAAACATGGATAAGATCCCAGGAAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333010.6
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp GTCTTCCTGGGATCTTATCCATGTTTTCGGTTACTCTTTAAGAGGCACCTTGACTGCACTCAGCCTCCTTaGCCAGAAAGAGTTGTTCGT +
Preference number: 4 (lower is better)
Translates to: VFLGSYPCFRLLFKRHLDCTQPP*PERVVR
Trigger: ACGAACAACTCTTTCTGGTCAAGGAGGCTGAGTGCA...GTCAAGGTGCCTCTTAAAGAGTAACCGAAAACATGGATAAGATCCCAGGAAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333010.6
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp GACCCCAGCATTCTAGTTTTTATTGTACATTCTTCAGTTATTGTTCTGGCTTTGCTCGTTCAGCGTCGATaGTGCCTCCCGTCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: DPSILVFIVHSSVIVLALLVQRR*CLPSAP
Trigger: AGGAGCAGACGGGAGGCATCATCGACGCTGAACGAG...CAAAGCCAGAACAATAACTGAAGAATGTACAATAAAAACTAGAATGCTGGGGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp GTAAAAGTGGGGTTCTGTATGATGGCATGCATATGCAATCAAGAGAGCTGGGAGAGCACTCACACCATCTaGGAATGGGTGAATTTGGAG +
Preference number: 4 (lower is better)
Translates to: VKVGFCMMACICNQESWESTHTI*EWVNLE
Trigger: CTCCAAATTCACCCATTCTCAGATGGTGTGAGTGCT...CTCCCAGCTCTCTTGATTGCATATGCATGCCATCATACAGAACCCCACTTTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp GTAAAAGTGGGGTTCTGTATGATGGCATGCATATGCAATCAAGAGAGCTGGGAGTTCGCTCGGGTCCTTTaGCTTCGTTACCAGTTTTGT +
Preference number: 4 (lower is better)
Translates to: VKVGFCMMACICNQESWEFARVL*LRYQFC
Trigger: ACAAAACTGGTAACGAAGTCAAAGGACCCGAGCGAA...CTCCCAGCTCTCTTGATTGCATATGCATGCCATCATACAGAACCCCACTTTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp TTAATGACTGGCTCTCCTGTGGTAAAAGTGGGGTTCTGTATGATGGCATGCATACACAGAGAGGTTAAGTaGCTGGGCCAAAGATACCTG +
Preference number: 4 (lower is better)
Translates to: LMTGSPVVKVGFCMMACIHREVK*LGQRYL
Trigger: CAGGTATCTTTGGCCCAGTCACTTAACCTCTCTGTG...TATGCATGCCATCATACAGAACCCCACTTTTACCACAGGAGAGCCAGTCATTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp GTCTTCCTGGGATCTTATCCATGTTTTCGGTTACTCTTTAAGAGGCACCTTGACGCTTTGATACCATGCTaGGACCCGGAGAAGCTGTTT +
Preference number: 4 (lower is better)
Translates to: VFLGSYPCFRLLFKRHLDALIPC*DPEKLF
Trigger: AAACAGCTTCTCCGGGTCTCAGCATGGTATCAAAGC...GTCAAGGTGCCTCTTAAAGAGTAACCGAAAACATGGATAAGATCCCAGGAAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333010.6
CDS-3UTR GCA 90 bp TTAAGTGACTGGGCCAAAGATACCTGGGTCAGCAGTAAATGTAAGAACAAAAAGAAGCAGCCAGGAACTTaGAGCAGACACCTCCTCTGG +
Preference number: 4 (lower is better)
Translates to: LSDWAKDTWVSSKCKNKKKQPGT*SRHLLW
Trigger: CCAGAGGAGGTGTCTGCTGCAAGTTCCTGGCTGCTT...CTTTTTGTTCTTACATTTACTGCTGACCCAGGTATCTTTGGCCCAGTCACTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265272.9
CDS-3UTR GCA 90 bp GTAAAAGTGGGGTTCTGTATGATGGCATGCATATGCAATCAAGAGAGCTGGGAGGACATTTCCTGCTCGTaGTGCTTGATAAGGTTCTCC +
Preference number: 4 (lower is better)
Translates to: VKVGFCMMACICNQESWEDISCS*CLIRFS
Trigger: GGAGAACCTTATCAAGCAGCACGAGCAGGAAATGTC...CTCCCAGCTCTCTTGATTGCATATGCATGCCATCATACAGAACCCCACTTTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR GCA 90 bp AGGTGTGTGTTGGAGCAGACGGAATATAGATTTACTCATATGGGCCCTGCAACAGTCCTTGACATTTCCTaGTCGTGCTGCTTGATAAGG +
Preference number: 4 (lower is better)
Translates to: RCVLEQTEYRFTHMGPATVLDIS*SCCLIR
Trigger: CCTTATCAAGCAGCACGAGCAGGAAATGTCAAGGAC...TGTTGCAGGGCCCATATGAGTAAATCTATATTCCGTCTGCTCCAACACACACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR GCA 90 bp TTAATGACTGGCTCTCCTGTGGTAAAAGTGGGGTTCTGTATGATGGCATGCATACTGCTTGGATCATATTaGTCAGAGCCTCGTCCACCT +
Preference number: 4 (lower is better)
Translates to: LMTGSPVVKVGFCMMACILLGSY*SEPRPP
Trigger: AGGTGGACGAGGCTCTGAGCAATATGATCCAAGCAG...TATGCATGCCATCATACAGAACCCCACTTTTACCACAGGAGAGCCAGTCATTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR GCA 90 bp TCAAGTTGGCTAGTGTTGGGTCACCAACACTGTAGAGGCACCCTCTTTCACATTTTTTCTTCCATGCGCTaGAAGGACACCATCAGTTCA +
Preference number: 4 (lower is better)
Translates to: SSWLVLGHQHCRGTLFHIFSSMR*KDTISS
Trigger: TGAACTGATGGTGTCCTTGCAGCGCATGGAAGAAAA...AATGTGAAAGAGGGTGCCTCTACAGTGTTGGTGACCCAACACTAGCCAACTTGA
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR GCA 90 bp TGCTTTTATTTCACATGTCACATTCGCTCGGGTCCTTTGACTTCGTTACCAGTTATGATGCCTCCCGTCTaGTCCTGTAGGAGGGCATAT +
Preference number: 4 (lower is better)
Translates to: CFYFTCHIRSGPLTSLPVMMPPV*SCRRAY
Trigger: ATATGCCCTCCTACAGGAGCAGACGGGAGGCATCAT...AACTGGTAACGAAGTCAAAGGACCCGAGCGAATGTGACATGTGAAATAAAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR GCA 90 bp AAGGAAGCATCGAATCTGCTTTTATTTCACATGTCACATTCGCTCGGGTCCTTTATGATGCCTCCCGTCTaGTCCTGTAGGAGGGCATAT +
Preference number: 4 (lower is better)
Translates to: KEASNLLLFHMSHSLGSFMMPPV*SCRRAY
Trigger: ATATGCCCTCCTACAGGAGCAGACGGGAGGCATCAT...AAAGGACCCGAGCGAATGTGACATGTGAAATAAAAGCAGATTCGATGCTTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR GCA 90 bp GGCACAGAGAGGTTAAGTGACTGGGCCAAAGATACCTGGGTCAGCAGTAAATGTCCCAAGATATCAAGCTaGTTTATGAGATCAGGGATG +
Preference number: 4 (lower is better)
Translates to: GTERLSDWAKDTWVSSKCPKISS*FMRSGM
Trigger: CATCCCTGATCTCATAAAGCAGCTTGATATCTTGGG...ACATTTACTGCTGACCCAGGTATCTTTGGCCCAGTCACTTAACCTCTCTGTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR GCA 90 bp AGGTGTGTGTTGGAGCAGACGGAATATAGATTTACTCATATGGGCCCTGCAACAGACAGTCATACTCTCTaGTCTTCCTCAGCATTTGCC +
Preference number: 4 (lower is better)
Translates to: RCVLEQTEYRFTHMGPATDSHTL*SSSAFA
Trigger: GGCAAATGCTGAGGAAGAGCAGAGAGTATGACTGTC...TGTTGCAGGGCCCATATGAGTAAATCTATATTCCGTCTGCTCCAACACACACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR GCA 90 bp GGCACAGAGAGGTTAAGTGACTGGGCCAAAGATACCTGGGTCAGCAGTAAATGTGTAGAGCTATCTTGTTaGTGTCATCTGTCTGGGAAA +
Preference number: 4 (lower is better)
Translates to: GTERLSDWAKDTWVSSKCVELSC*CHLSGK
Trigger: TTTCCCAGACAGATGACAGCAACAAGATAGCTCTAC...ACATTTACTGCTGACCCAGGTATCTTTGGCCCAGTCACTTAACCTCTCTGTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR GCA 90 bp GAGGCTCATGAGCAAGAGTTGGTAAAAATTACAGTTCAGTCTATAGTCTTGAGACCAGGAGGTGGAGCTTaGCATGAGCCGAGATTGTGC +
Preference number: 4 (lower is better)
Translates to: EAHEQELVKITVQSIVLRPGGGA*HEPRLC
Trigger: GCACAATCTCGGCTCATGGCAAGCTCCACCTCCTGG...TCTCAAGACTATAGACTGAACTGTAATTTTTACCAACTCTTGCTCATGAGCCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR GCA 90 bp GGCACAGAGAGGTTAAGTGACTGGGCCAAAGATACCTGGGTCAGCAGTAAATGTATGAACCCGGAAGAATaGTGTTCTGACTGCTACAAA +
Preference number: 4 (lower is better)
Translates to: GTERLSDWAKDTWVSSKCMNPEE*CSDCYK
Trigger: TTTGTAGCAGTCAGAACAGCATTCTTCCGGGTTCAT...ACATTTACTGCTGACCCAGGTATCTTTGGCCCAGTCACTTAACCTCTCTGTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616793.5
CDS-3UTR CCA 90 bp AGCATATATTGTAGATTTTCAACAGGGTTGTGTAGGAACTGTCAAGTAAGAAACCTCCCTCTCGGAGGATaGGGTGAGCTCGGAAGCAGC +
Preference number: 4 (lower is better)
Translates to: SIYCRFSTGLCRNCQVRNLPLGG*GELGSS
Trigger: GCTGCTTCCGAGCTCACCCCATCCTCCGAGAGGGAG...GTTTCTTACTTGACAGTTCCTACACAACCCTGTTGAAAATCTACAATATATGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265272.9
ENST00000333010.6
CDS-3UTR CCA 90 bp ACTGGCTCTCCTGTGGTAAAAGTGGGGTTCTGTATGATGGCATGCATATGCAATTTTTCCCTCTGTCTCTaGTTGGCGATGGTGCGAATA +
Preference number: 4 (lower is better)
Translates to: TGSPVVKVGFCMMACICNFSLCL*LAMVRI
Trigger: TATTCGCACCATCGCCAACCAGAGACAGAGGGAAAA...ATTGCATATGCATGCCATCATACAGAACCCCACTTTTACCACAGGAGAGCCAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265272.9
ENST00000616793.5
CDS-3UTR CCA 90 bp GACCCCAGCATTCTAGTTTTTATTGTACATTCTTCAGTTATTGTTCTGGCTTTGCCTCAATCGCTGCCCTaGAAGCCCATGCTGAGACCC +
Preference number: 4 (lower is better)
Translates to: DPSILVFIVHSSVIVLALPQSLP*KPMLRP
Trigger: GGGTCTCAGCATGGGCTTCCAGGGCAGCGATTGAGG...CAAAGCCAGAACAATAACTGAAGAATGTACAATAAAAACTAGAATGCTGGGGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CCA 90 bp GTAAAAGTGGGGTTCTGTATGATGGCATGCATATGCAATCAAGAGAGCTGGGAGTCAGCATCTACTGTGTaGTGCTCCTTGGTAAGGTCT +
Preference number: 4 (lower is better)
Translates to: VKVGFCMMACICNQESWESASTV*CSLVRS
Trigger: AGACCTTACCAAGGAGCACCACACAGTAGATGCTGA...CTCCCAGCTCTCTTGATTGCATATGCATGCCATCATACAGAACCCCACTTTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CCA 90 bp ACTGGCTCTCCTGTGGTAAAAGTGGGGTTCTGTATGATGGCATGCATATGCAATGCTCATTCTGGTCTCTaGCGTCCTGTAGTTCTTGTT +
Preference number: 4 (lower is better)
Translates to: TGSPVVKVGFCMMACICNAHSGL*RPVVLV
Trigger: AACAAGAACTACAGGACGCCAGAGACCAGAATGAGC...ATTGCATATGCATGCCATCATACAGAACCCCACTTTTACCACAGGAGAGCCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CCA 90 bp TGCTTTTATTTCACATGTCACATTCGCTCGGGTCCTTTGACTTCGTTACCAGTTGGGACAGCACAGTGCTaGCCTGAATTATGGCCACTT +
Preference number: 4 (lower is better)
Translates to: CFYFTCHIRSGPLTSLPVGTAQC*PELWPL
Trigger: AAGTGGCCATAATTCAGGCCAGCACTGTGCTGTCCC...AACTGGTAACGAAGTCAAAGGACCCGAGCGAATGTGACATGTGAAATAAAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CCA 90 bp TGCTTTTATTTCACATGTCACATTCGCTCGGGTCCTTTGACTTCGTTACCAGTTGCTCCTTCAATCTGCTaGATCCACTTCTCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: CFYFTCHIRSGPLTSLPVAPSIC*IHFSAR
Trigger: CCTGGCAGAGAAGTGGATCCAGCAGATTGAAGGAGC...AACTGGTAACGAAGTCAAAGGACCCGAGCGAATGTGACATGTGAAATAAAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CCA 90 bp TCAAGTTGGCTAGTGTTGGGTCACCAACACTGTAGAGGCACCCTCTTTCACATTAATTCCATCATTTTCTaGTGTAGGGCAGCCTCAGCT +
Preference number: 4 (lower is better)
Translates to: SSWLVLGHQHCRGTLFHINSIIF*CRAASA
Trigger: AGCTGAGGCTGCCCTACACCAGAAAATGATGGAATT...AATGTGAAAGAGGGTGCCTCTACAGTGTTGGTGACCCAACACTAGCCAACTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CCA 90 bp GTCTTCCTGGGATCTTATCCATGTTTTCGGTTACTCTTTAAGAGGCACCTTGACGAGAGGTTAAGTGACTaGGCCAAAGATACCTGGGTC +
Preference number: 4 (lower is better)
Translates to: VFLGSYPCFRLLFKRHLDERLSD*AKDTWV
Trigger: GACCCAGGTATCTTTGGCCCAGTCACTTAACCTCTC...GTCAAGGTGCCTCTTAAAGAGTAACCGAAAACATGGATAAGATCCCAGGAAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CCA 90 bp TCAAGTTGGCTAGTGTTGGGTCACCAACACTGTAGAGGCACCCTCTTTCACATTTGTGGGAAGTTGCTATaGTTAATGGCTGGTATAGGC +
Preference number: 4 (lower is better)
Translates to: SSWLVLGHQHCRGTLFHICGKLL*LMAGIG
Trigger: GCCTATACCAGCCATTAACCATAGCAACTTCCCACA...AATGTGAAAGAGGGTGCCTCTACAGTGTTGGTGACCCAACACTAGCCAACTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616793.5
3UTR CAA 72 bp TCCTCTTCCATATTTTCTGACTCAAGTTGGCTAGTGTaGGGTCACCAACACTGTAGAGGCACCCTCTTTCAC +
Preference number: 4 (lower is better)
Translates to: SSSIFSDSSWLV*GHQHCRGTLFH
Trigger: GTGAAAGAGGGTGCCTCTACAGTGTTGGTGACCCAACACTAGCCAACTTGAGTCAGAAAATATGGAAGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp TGCTTTTATTTCACATGTCACATTCGCTCGGGTCCTTTGACTTCGTTACCAGTTAATCCATTTTCCTTGTaGCCGAGTCGGATGCAGCCT +
Preference number: 4 (lower is better)
Translates to: CFYFTCHIRSGPLTSLPVNPFSL*PSRMQP
Trigger: AGGCTGCATCCGACTCGGTCACAAGGAAAATGGATT...AACTGGTAACGAAGTCAAAGGACCCGAGCGAATGTGACATGTGAAATAAAAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp AGGTGTGTGTTGGAGCAGACGGAATATAGATTTACTCATATGGGCCCTGCAACAGGGAGAGATGCAAACTaGATCCATTTTCCTTGTGAC +
Preference number: 4 (lower is better)
Translates to: RCVLEQTEYRFTHMGPATGRDAN*IHFPCD
Trigger: GTCACAAGGAAAATGGATTCAGTTTGCATCTCTCCC...TGTTGCAGGGCCCATATGAGTAAATCTATATTCCGTCTGCTCCAACACACACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp GACCCCAGCATTCTAGTTTTTATTGTACATTCTTCAGTTATTGTTCTGGCTTTGCTTGAAGGGCAACAATaGGTGCCTCGGGCTTCTCGC +
Preference number: 4 (lower is better)
Translates to: DPSILVFIVHSSVIVLALLEGQQ*VPRASR
Trigger: GCGAGAAGCCCGAGGCACTCATTGTTGCCCTTCAAG...CAAAGCCAGAACAATAACTGAAGAATGTACAATAAAAACTAGAATGCTGGGGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp TTCAGGAACATACATTTGCTCTCAGAGATGACTCCAAGACTCAGTAATACACAACATGGAGCTTGGCTTTaGGTTCTGTCACCAGCACCG +
Preference number: 4 (lower is better)
Translates to: FRNIHLLSEMTPRLSNTQHGAWL*VLSPAP
Trigger: CGGTGCTGGTGACAGAACTCAAAGCCAAGCTCCATG...TTGTGTATTACTGAGTCTTGGAGTCATCTCTGAGAGCAAATGTATGTTCCTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp TTAATGACTGGCTCTCCTGTGGTAAAAGTGGGGTTCTGTATGATGGCATGCATAGAAGGTCCCCAGCCTTaGTTTTATCTGCTTGGATCA +
Preference number: 4 (lower is better)
Translates to: LMTGSPVVKVGFCMMACIEGPQP*FYLLGS
Trigger: TGATCCAAGCAGATAAAATCAAGGCTGGGGACCTTC...TATGCATGCCATCATACAGAACCCCACTTTTACCACAGGAGAGCCAGTCATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp AGGTGTGTGTTGGAGCAGACGGAATATAGATTTACTCATATGGGCCCTGCAACATCCAAAGCCTCCTTCTaGAGTTGGAGTTTCTGTACA +
Preference number: 4 (lower is better)
Translates to: RCVLEQTEYRFTHMGPATSKASF*SWSFCT
Trigger: TGTACAGAAACTCCAACTTCAGAAGGAGGCTTTGGA...TGTTGCAGGGCCCATATGAGTAAATCTATATTCCGTCTGCTCCAACACACACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp AAGGAAGCATCGAATCTGCTTTTATTTCACATGTCACATTCGCTCGGGTCCTTTTGCACTCAGCCTCCTTaGCCAGAAAGAGTTGTTCGT +
Preference number: 4 (lower is better)
Translates to: KEASNLLLFHMSHSLGSFCTQPP*PERVVR
Trigger: ACGAACAACTCTTTCTGGTCAAGGAGGCTGAGTGCA...AAAGGACCCGAGCGAATGTGACATGTGAAATAAAAGCAGATTCGATGCTTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp AGCATATATTGTAGATTTTCAACAGGGTTGTGTAGGAACTGTCAAGTAAGAAACCTCGTTCAGCGTCGATaGTGCCTCCCGTCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: SIYCRFSTGLCRNCQVRNLVQRR*CLPSAP
Trigger: AGGAGCAGACGGGAGGCATCATCGACGCTGAACGAG...GTTTCTTACTTGACAGTTCCTACACAACCCTGTTGAAAATCTACAATATATGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265272.9
ENST00000333010.6
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp TTAAGTGACTGGGCCAAAGATACCTGGGTCAGCAGTAAATGTAAGAACAAAAAGGCTTGGAGCTGTTCTTaGGCCTTGGCTTCTCGTTCA +
Preference number: 4 (lower is better)
Translates to: LSDWAKDTWVSSKCKNKKAWSCS*ALASRS
Trigger: TGAACGAGAAGCCAAGGCTCAAGAACAGCTCCAAGC...CTTTTTGTTCTTACATTTACTGCTGACCCAGGTATCTTTGGCCCAGTCACTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp TTAATGACTGGCTCTCCTGTGGTAAAAGTGGGGTTCTGTATGATGGCATGCATAAGCACTCACACCATCTaGGAATGGGTGAATTTGGAG +
Preference number: 4 (lower is better)
Translates to: LMTGSPVVKVGFCMMACISTHTI*EWVNLE
Trigger: CTCCAAATTCACCCATTCTCAGATGGTGTGAGTGCT...TATGCATGCCATCATACAGAACCCCACTTTTACCACAGGAGAGCCAGTCATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp GTCTTCCTGGGATCTTATCCATGTTTTCGGTTACTCTTTAAGAGGCACCTTGACAGCACTCACACCATCTaGGAATGGGTGAATTTGGAG +
Preference number: 4 (lower is better)
Translates to: VFLGSYPCFRLLFKRHLDSTHTI*EWVNLE
Trigger: CTCCAAATTCACCCATTCTCAGATGGTGTGAGTGCT...GTCAAGGTGCCTCTTAAAGAGTAACCGAAAACATGGATAAGATCCCAGGAAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333010.6
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp AAGGAAGCATCGAATCTGCTTTTATTTCACATGTCACATTCGCTCGGGTCCTTTAGCACAGTGCTGGCCTaGATTATGGCCACTTGTTCT +
Preference number: 4 (lower is better)
Translates to: KEASNLLLFHMSHSLGSFSTVLA*IMATCS
Trigger: AGAACAAGTGGCCATAATTCAGGCCAGCACTGTGCT...AAAGGACCCGAGCGAATGTGACATGTGAAATAAAAGCAGATTCGATGCTTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp TGCTTTTATTTCACATGTCACATTCGCTCGGGTCCTTTGACTTCGTTACCAGTTAGCACAGTGCTGGCCTaGATTATGGCCACTTGTTCT +
Preference number: 4 (lower is better)
Translates to: CFYFTCHIRSGPLTSLPVSTVLA*IMATCS
Trigger: AGAACAAGTGGCCATAATTCAGGCCAGCACTGTGCT...AACTGGTAACGAAGTCAAAGGACCCGAGCGAATGTGACATGTGAAATAAAAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp AGGTGTGTGTTGGAGCAGACGGAATATAGATTTACTCATATGGGCCCTGCAACAGTAGTTCTTAGCTTTTaGTCTCCCTCTCACTGGTGT +
Preference number: 4 (lower is better)
Translates to: RCVLEQTEYRFTHMGPATVVLSF*SPSHWC
Trigger: ACACCAGTGAGAGGGAGATCAAAAGCTAAGAACTAC...TGTTGCAGGGCCCATATGAGTAAATCTATATTCCGTCTGCTCCAACACACACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp GGCACAGAGAGGTTAAGTGACTGGGCCAAAGATACCTGGGTCAGCAGTAAATGTCTGCACAGCAGGGGTTaGATATTTCATTGTAACTTT +
Preference number: 4 (lower is better)
Translates to: GTERLSDWAKDTWVSSKCLHSRG*IFHCNF
Trigger: AAAGTTACAATGAAATATTCAACCCCTGCTGTGCAG...ACATTTACTGCTGACCCAGGTATCTTTGGCCCAGTCACTTAACCTCTCTGTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp TTAATGACTGGCTCTCCTGTGGTAAAAGTGGGGTTCTGTATGATGGCATGCATATTGTTGTGGTCACTGTaGTCCACTTCTCATCTGTCG +
Preference number: 4 (lower is better)
Translates to: LMTGSPVVKVGFCMMACILLWSL*STSHLS
Trigger: CGACAGATGAGAAGTGGATCACAGTGACCACAACAA...TATGCATGCCATCATACAGAACCCCACTTTTACCACAGGAGAGCCAGTCATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp GTCTTCCTGGGATCTTATCCATGTTTTCGGTTACTCTTTAAGAGGCACCTTGACTTGTTGTGGTCACTGTaGTCCACTTCTCATCTGTCG +
Preference number: 4 (lower is better)
Translates to: VFLGSYPCFRLLFKRHLDLLWSL*STSHLS
Trigger: CGACAGATGAGAAGTGGATCACAGTGACCACAACAA...GTCAAGGTGCCTCTTAAAGAGTAACCGAAAACATGGATAAGATCCCAGGAAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp ATGAATGAGATCAGTCCATTGTTGATAGAGGAATGCAGATGTGAGAGTAGGACAGGCAGGAGAATCACTTaGATCCAGGAGGTGGAGCTT +
Preference number: 4 (lower is better)
Translates to: MNEISPLLIEECRCESRTGRRIT*IQEVEL
Trigger: AAGCTCCACCTCCTGGATTCAAGTGATTCTCCTGCC...TGTCCTACTCTCACATCTGCATTCCTCTATCAACAATGGACTGATCTCATTCAT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp TTCAGGAACATACATTTGCTCTCAGAGATGACTCCAAGACTCAGTAATACACAATCTATCTGCCCTTTCTaGGCCAGAGTCGCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: FRNIHLLSEMTPRLSNTQSICPF*ARVASR
Trigger: CCTGGAAGCGACTCTGGCTCAGAAAGGGCAGATAGA...TTGTGTATTACTGAGTCTTGGAGTCATCTCTGAGAGCAAATGTATGTTCCTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507386.5
CDS-3UTR GCA 90 bp GAGGCTCATGAGCAAGAGTTGGTAAAAATTACAGTTCAGTCTATAGTCTTGAGATGTGACCGAGTCGGATaGAGCCTCCGAACCCAACAT +
Preference number: 4 (lower is better)
Translates to: EAHEQELVKITVQSIVLRCDRVG*SLRTQH
Trigger: ATGTTGGGTTCGGAGGCTGCATCCGACTCGGTCACA...TCTCAAGACTATAGACTGAACTGTAATTTTTACCAACTCTTGCTCATGAGCCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265272.9
ENST00000616793.5
CDS-3UTR GCA 90 bp GAGGCTCATGAGCAAGAGTTGGTAAAAATTACAGTTCAGTCTATAGTCTTGAGAAAGGGCAACAATGAGTaGCTCGGGCTTCTCGCCCTT +
Preference number: 4 (lower is better)
Translates to: EAHEQELVKITVQSIVLRKGNNE*LGLLAL
Trigger: AAGGGCGAGAAGCCCGAGGCACTCATTGTTGCCCTT...TCTCAAGACTATAGACTGAACTGTAATTTTTACCAACTCTTGCTCATGAGCCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR GCA 90 bp CAAACTTTATTTCTCCTATTACTAGTGGAGAACACATTTGCTCTCTACCTAAGTGTCACCAGCACCGTGTaGTTGCGCTGCTCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: QTLFLLLLVENTFALYLSVTSTV*LRCSSS
Trigger: TGAGCTGGAGCAGCGCAAGCACACGGTGCTGGTGAC...ACTTAGGTAGAGAGCAAATGTGTTCTCCACTAGTAATAGGAGAAATAAAGTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616793.5
CDS-3UTR GCA 90 bp TTAATGACTGGCTCTCCTGTGGTAAAAGTGGGGTTCTGTATGATGGCATGCATAATTTCCTGCTCGTGCTaGTTGATAAGGTTCTCCCTC +
Preference number: 4 (lower is better)
Translates to: LMTGSPVVKVGFCMMACIISCSC*LIRFSL
Trigger: GAGGGAGAACCTTATCAAGCAGCACGAGCAGGAAAT...TATGCATGCCATCATACAGAACCCCACTTTTACCACAGGAGAGCCAGTCATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR GCA 90 bp GTCTTCCTGGGATCTTATCCATGTTTTCGGTTACTCTTTAAGAGGCACCTTGACATTTCCTGCTCGTGCTaGTTGATAAGGTTCTCCCTC +
Preference number: 4 (lower is better)
Translates to: VFLGSYPCFRLLFKRHLDISCSC*LIRFSL
Trigger: GAGGGAGAACCTTATCAAGCAGCACGAGCAGGAAAT...GTCAAGGTGCCTCTTAAAGAGTAACCGAAAACATGGATAAGATCCCAGGAAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333010.6
ENST00000507386.5
ENST00000616793.5
CDS-3UTR GCA 90 bp GTCTTCCTGGGATCTTATCCATGTTTTCGGTTACTCTTTAAGAGGCACCTTGACGACATTTCCTGCTCGTaGTGCTTGATAAGGTTCTCC +
Preference number: 4 (lower is better)
Translates to: VFLGSYPCFRLLFKRHLDDISCS*CLIRFS
Trigger: GGAGAACCTTATCAAGCAGCACGAGCAGGAAATGTC...GTCAAGGTGCCTCTTAAAGAGTAACCGAAAACATGGATAAGATCCCAGGAAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333010.6
ENST00000507386.5
ENST00000616793.5
CDS-3UTR GCA 90 bp GTCTTCCTGGGATCTTATCCATGTTTTCGGTTACTCTTTAAGAGGCACCTTGACGTCCTTGACATTTCCTaGTCGTGCTGCTTGATAAGG +
Preference number: 4 (lower is better)
Translates to: VFLGSYPCFRLLFKRHLDVLDIS*SCCLIR
Trigger: CCTTATCAAGCAGCACGAGCAGGAAATGTCAAGGAC...GTCAAGGTGCCTCTTAAAGAGTAACCGAAAACATGGATAAGATCCCAGGAAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333010.6
ENST00000507386.5
ENST00000616793.5
CDS-3UTR GCA 90 bp ATGAATGAGATCAGTCCATTGTTGATAGAGGAATGCAGATGTGAGAGTAGGACATTACTTTGTCACTGCTaGCGTCGCGGAGAGCACAGA +
Preference number: 4 (lower is better)
Translates to: MNEISPLLIEECRCESRTLLCHC*RRGEHR
Trigger: TCTGTGCTCTCCGCGACGGCAGCAGTGACAAAGTAA...TGTCCTACTCTCACATCTGCATTCCTCTATCAACAATGGACTGATCTCATTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR GCA 90 bp TTAATGACTGGCTCTCCTGTGGTAAAAGTGGGGTTCTGTATGATGGCATGCATATTTCTCGTTTTGGGCTaGTCATGTTGCACTCAGCCT +
Preference number: 4 (lower is better)
Translates to: LMTGSPVVKVGFCMMACIFLVLG*SCCTQP
Trigger: AGGCTGAGTGCAACATGAGCAGCCCAAAACGAGAAA...TATGCATGCCATCATACAGAACCCCACTTTTACCACAGGAGAGCCAGTCATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR GCA 90 bp GTCTTCCTGGGATCTTATCCATGTTTTCGGTTACTCTTTAAGAGGCACCTTGACTTTCTCGTTTTGGGCTaGTCATGTTGCACTCAGCCT +
Preference number: 4 (lower is better)
Translates to: VFLGSYPCFRLLFKRHLDFLVLG*SCCTQP
Trigger: AGGCTGAGTGCAACATGAGCAGCCCAAAACGAGAAA...GTCAAGGTGCCTCTTAAAGAGTAACCGAAAACATGGATAAGATCCCAGGAAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333010.6
ENST00000507386.5
ENST00000616793.5
CDS-3UTR GCA 90 bp AGGTGTGTGTTGGAGCAGACGGAATATAGATTTACTCATATGGGCCCTGCAACATTTTCTTCCATGCGCTaGAAGGACACCATCAGTTCA +
Preference number: 4 (lower is better)
Translates to: RCVLEQTEYRFTHMGPATFSSMR*KDTISS
Trigger: TGAACTGATGGTGTCCTTGCAGCGCATGGAAGAAAA...TGTTGCAGGGCCCATATGAGTAAATCTATATTCCGTCTGCTCCAACACACACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR GCA 90 bp GAGGCTCATGAGCAAGAGTTGGTAAAAATTACAGTTCAGTCTATAGTCTTGAGACCAGGGACAGCACAGTaGTGGCCTGAATTATGGCCA +
Preference number: 4 (lower is better)
Translates to: EAHEQELVKITVQSIVLRPGTAQ*WPELWP
Trigger: TGGCCATAATTCAGGCCAGCACTGTGCTGTCCCTGG...TCTCAAGACTATAGACTGAACTGTAATTTTTACCAACTCTTGCTCATGAGCCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR GCA 90 bp AATTTTGCCATCTTTGAAGGTTTAGAAGCACTTGTCTTCCTGGGATCTTATCCACCAGGGACAGCACAGTaGTGGCCTGAATTATGGCCA +
Preference number: 4 (lower is better)
Translates to: NFAIFEGLEALVFLGSYPPGTAQ*WPELWP
Trigger: TGGCCATAATTCAGGCCAGCACTGTGCTGTCCCTGG...TGGATAAGATCCCAGGAAGACAAGTGCTTCTAAACCTTCAAAGATGGCAAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333010.6
ENST00000507386.5
ENST00000616793.5
CDS-3UTR GCA 90 bp GAGGCTCATGAGCAAGAGTTGGTAAAAATTACAGTTCAGTCTATAGTCTTGAGACTGGATCCACTTCTCTaGCAGGGACAGCACAGTGCT +
Preference number: 4 (lower is better)
Translates to: EAHEQELVKITVQSIVLRLDPLL*QGQHSA
Trigger: AGCACTGTGCTGTCCCTGGCAGAGAAGTGGATCCAG...TCTCAAGACTATAGACTGAACTGTAATTTTTACCAACTCTTGCTCATGAGCCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR GCA 90 bp ATCCACTCTTTAGTAAGTTCGTGGGATCTTGATTGTGGGCAAAATTGGGCTCAATCAGCTCCTTCAATCTaGTGGATCCACTTCTCTGCC +
Preference number: 4 (lower is better)
Translates to: IHSLVSSWDLDCGQNWAQSAPSI*WIHFSA
Trigger: GGCAGAGAAGTGGATCCAGCAGATTGAAGGAGCTGA...TTGAGCCCAATTTTGCCCACAATCAAGATCCCACGAACTTACTAAAGAGTGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616793.5
CDS-3UTR GCA 90 bp TCAAGTTGGCTAGTGTTGGGTCACCAACACTGTAGAGGCACCCTCTTTCACATTAAGAAGAGGTCAGAATaGTCTAGGCATGTGAGGATT +
Preference number: 4 (lower is better)
Translates to: SSWLVLGHQHCRGTLFHIKKRSE*SRHVRI
Trigger: AATCCTCACATGCCTAGAGCATTCTGACCTCTTCTT...AATGTGAAAGAGGGTGCCTCTACAGTGTTGGTGACCCAACACTAGCCAACTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR GCA 90 bp ACTGGCTCTCCTGTGGTAAAAGTGGGGTTCTGTATGATGGCATGCATATGCAATATGATGGCATGCATATaGAATCAAGAGAGCTGGGAG +
Preference number: 4 (lower is better)
Translates to: TGSPVVKVGFCMMACICNMMACI*NQESWE
Trigger: CTCCCAGCTCTCTTGATTGCATATGCATGCCATCAT...ATTGCATATGCATGCCATCATACAGAACCCCACTTTTACCACAGGAGAGCCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CCA 90 bp GGCACAGAGAGGTTAAGTGACTGGGCCAAAGATACCTGGGTCAGCAGTAAATGTTACTGTTTCTTATCCTaGAGTACGATGTCTCAGCAT +
Preference number: 4 (lower is better)
Translates to: GTERLSDWAKDTWVSSKCYCFLS*STMSQH
Trigger: ATGCTGAGACATCGTACTCCAGGATAAGAAACAGTA...ACATTTACTGCTGACCCAGGTATCTTTGGCCCAGTCACTTAACCTCTCTGTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CCA 90 bp TCAAGTTGGCTAGTGTTGGGTCACCAACACTGTAGAGGCACCCTCTTTCACATTCAAGCTTTGATACCTTaGACTTCTCTTGATGCAGCT +
Preference number: 4 (lower is better)
Translates to: SSWLVLGHQHCRGTLFHIQALIP*TSLDAA
Trigger: AGCTGCATCAAGAGAAGTCCAAGGTATCAAAGCTTG...AATGTGAAAGAGGGTGCCTCTACAGTGTTGGTGACCCAACACTAGCCAACTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CCA 90 bp GTCTTCCTGGGATCTTATCCATGTTTTCGGTTACTCTTTAAGAGGCACCTTGACATCACCTGCCCTTCCTaGAATTTCTCGTTTTGGGCT +
Preference number: 4 (lower is better)
Translates to: VFLGSYPCFRLLFKRHLDITCPS*NFSFWA
Trigger: AGCCCAAAACGAGAAATTCCAGGAAGGGCAGGTGAT...GTCAAGGTGCCTCTTAAAGAGTAACCGAAAACATGGATAAGATCCCAGGAAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333010.6
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CCA 90 bp GGCACAGAGAGGTTAAGTGACTGGGCCAAAGATACCTGGGTCAGCAGTAAATGTAACAGGCCTCTTAATTaGCTTGGAACTTCTTCTATG +
Preference number: 4 (lower is better)
Translates to: GTERLSDWAKDTWVSSKCNRPLN*LGTSSM
Trigger: CATAGAAGAAGTTCCAAGCCAATTAAGAGGCCTGTT...ACATTTACTGCTGACCCAGGTATCTTTGGCCCAGTCACTTAACCTCTCTGTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CCA 90 bp ATGAATGAGATCAGTCCATTGTTGATAGAGGAATGCAGATGTGAGAGTAGGACAGCTGTTCTTGAGCCTTaGCTTCTCGTTCAGCGTCGA +
Preference number: 4 (lower is better)
Translates to: MNEISPLLIEECRCESRTAVLEP*LLVQRR
Trigger: TCGACGCTGAACGAGAAGCCAAGGCTCAAGAACAGC...TGTCCTACTCTCACATCTGCATTCCTCTATCAACAATGGACTGATCTCATTCAT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CCA 90 bp GGCACAGAGAGGTTAAGTGACTGGGCCAAAGATACCTGGGTCAGCAGTAAATGTCCAGGTCTTCAATTTTaGCTTTATACCTTAGCACCT +
Preference number: 4 (lower is better)
Translates to: GTERLSDWAKDTWVSSKCPGLQF*LYTLAP
Trigger: AGGTGCTAAGGTATAAAGCCAAAATTGAAGACCTGG...ACATTTACTGCTGACCCAGGTATCTTTGGCCCAGTCACTTAACCTCTCTGTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CCA 90 bp GTCTTCCTGGGATCTTATCCATGTTTTCGGTTACTCTTTAAGAGGCACCTTGACGCTCATTCTGGTCTCTaGCGTCCTGTAGTTCTTGTT +
Preference number: 4 (lower is better)
Translates to: VFLGSYPCFRLLFKRHLDAHSGL*RPVVLV
Trigger: AACAAGAACTACAGGACGCCAGAGACCAGAATGAGC...GTCAAGGTGCCTCTTAAAGAGTAACCGAAAACATGGATAAGATCCCAGGAAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333010.6
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CCA 90 bp TTAAGTGACTGGGCCAAAGATACCTGGGTCAGCAGTAAATGTAAGAACAAAAAGGGGACAGCACAGTGCTaGCCTGAATTATGGCCACTT +
Preference number: 4 (lower is better)
Translates to: LSDWAKDTWVSSKCKNKKGTAQC*PELWPL
Trigger: AAGTGGCCATAATTCAGGCCAGCACTGTGCTGTCCC...CTTTTTGTTCTTACATTTACTGCTGACCCAGGTATCTTTGGCCCAGTCACTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CCA 90 bp TTAAGTGACTGGGCCAAAGATACCTGGGTCAGCAGTAAATGTAAGAACAAAAAGGCTCCTTCAATCTGCTaGATCCACTTCTCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: LSDWAKDTWVSSKCKNKKAPSIC*IHFSAR
Trigger: CCTGGCAGAGAAGTGGATCCAGCAGATTGAAGGAGC...CTTTTTGTTCTTACATTTACTGCTGACCCAGGTATCTTTGGCCCAGTCACTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CCA 90 bp AGGTGTGTGTTGGAGCAGACGGAATATAGATTTACTCATATGGGCCCTGCAACAAATTCCATCATTTTCTaGTGTAGGGCAGCCTCAGCT +
Preference number: 4 (lower is better)
Translates to: RCVLEQTEYRFTHMGPATNSIIF*CRAASA
Trigger: AGCTGAGGCTGCCCTACACCAGAAAATGATGGAATT...TGTTGCAGGGCCCATATGAGTAAATCTATATTCCGTCTGCTCCAACACACACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CCA 90 bp GTAAAAGTGGGGTTCTGTATGATGGCATGCATATGCAATCAAGAGAGCTGGGAGTTCAGAGATGCTCTCTaGCCCATGTTCCCTATAGAT +
Preference number: 4 (lower is better)
Translates to: VKVGFCMMACICNQESWEFRDAL*PMFPID
Trigger: ATCTATAGGGAACATGGGCCAGAGAGCATCTCTGAA...CTCCCAGCTCTCTTGATTGCATATGCATGCCATCATACAGAACCCCACTTTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CCA 90 bp GGCACAGAGAGGTTAAGTGACTGGGCCAAAGATACCTGGGTCAGCAGTAAATGTCATAGAAAGAGTTTCTaGCTCCCTACACATATTCTC +
Preference number: 4 (lower is better)
Translates to: GTERLSDWAKDTWVSSKCHRKSF*LPTHIL
Trigger: GAGAATATGTGTAGGGAGCCAGAAACTCTTTCTATG...ACATTTACTGCTGACCCAGGTATCTTTGGCCCAGTCACTTAACCTCTCTGTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CCA 90 bp AAGGAAGCATCGAATCTGCTTTTATTTCACATGTCACATTCGCTCGGGTCCTTTGAGAGGTTAAGTGACTaGGCCAAAGATACCTGGGTC +
Preference number: 4 (lower is better)
Translates to: KEASNLLLFHMSHSLGSFERLSD*AKDTWV
Trigger: GACCCAGGTATCTTTGGCCCAGTCACTTAACCTCTC...AAAGGACCCGAGCGAATGTGACATGTGAAATAAAAGCAGATTCGATGCTTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp ATGAATGAGATCAGTCCATTGTTGATAGAGGAATGCAGATGTGAGAGTAGGACATCTTCATTGGCAGCTTaGAGGGCAACAATGAGTGCC +
Preference number: 4 (lower is better)
Translates to: MNEISPLLIEECRCESRTSSLAA*RATMSA
Trigger: GGCACTCATTGTTGCCCTTCAAGCTGCCAATGAAGA...TGTCCTACTCTCACATCTGCATTCCTCTATCAACAATGGACTGATCTCATTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp GTAAAAGTGGGGTTCTGTATGATGGCATGCATATGCAATCAAGAGAGCTGGGAGCTCTCTTTCAAGCTTTaGTACCTTGGACTTCTCTTG +
Preference number: 4 (lower is better)
Translates to: VKVGFCMMACICNQESWELSFKL*YLGLLL
Trigger: CAAGAGAAGTCCAAGGTATCAAAGCTTGAAAGAGAG...CTCCCAGCTCTCTTGATTGCATATGCATGCCATCATACAGAACCCCACTTTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp GAGGCTCATGAGCAAGAGTTGGTAAAAATTACAGTTCAGTCTATAGTCTTGAGATACCTTCACCGTCCTTaGCATTTCCTGCTCGTGCTG +
Preference number: 4 (lower is better)
Translates to: EAHEQELVKITVQSIVLRYLHRP*HFLLVL
Trigger: CAGCACGAGCAGGAAATGTCAAGGACGGTGAAGGTA...TCTCAAGACTATAGACTGAACTGTAATTTTTACCAACTCTTGCTCATGAGCCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp TGCTTTTATTTCACATGTCACATTCGCTCGGGTCCTTTGACTTCGTTACCAGTTGAAGGTCCCCAGCCTTaGTTTTATCTGCTTGGATCA +
Preference number: 4 (lower is better)
Translates to: CFYFTCHIRSGPLTSLPVEGPQP*FYLLGS
Trigger: TGATCCAAGCAGATAAAATCAAGGCTGGGGACCTTC...AACTGGTAACGAAGTCAAAGGACCCGAGCGAATGTGACATGTGAAATAAAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp AATTTTGCCATCTTTGAAGGTTTAGAAGCACTTGTCTTCCTGGGATCTTATCCAGCTCCGACTCCCACTTaGTCTTCGAGATGGCTTCTT +
Preference number: 4 (lower is better)
Translates to: NFAIFEGLEALVFLGSYPAPTPT*SSRWLL
Trigger: AAGAAGCCATCTCGAAGATCAAGTGGGAGTCGGAGC...TGGATAAGATCCCAGGAAGACAAGTGCTTCTAAACCTTCAAAGATGGCAAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333010.6
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp TTAAGTGACTGGGCCAAAGATACCTGGGTCAGCAGTAAATGTAAGAACAAAAAGTCCTGTCCTTGGCTTTaGTTTCATCCATCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: LSDWAKDTWVSSKCKNKKSCPWL*FHPSAS
Trigger: GGAGGCTGATGGATGAAATCAAAGCCAAGGACAGGA...CTTTTTGTTCTTACATTTACTGCTGACCCAGGTATCTTTGGCCCAGTCACTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp GTCTTCCTGGGATCTTATCCATGTTTTCGGTTACTCTTTAAGAGGCACCTTGACTCCAAAGCCTCCTTCTaGAGTTGGAGTTTCTGTACA +
Preference number: 4 (lower is better)
Translates to: VFLGSYPCFRLLFKRHLDSKASF*SWSFCT
Trigger: TGTACAGAAACTCCAACTTCAGAAGGAGGCTTTGGA...GTCAAGGTGCCTCTTAAAGAGTAACCGAAAACATGGATAAGATCCCAGGAAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333010.6
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp AATTTTGCCATCTTTGAAGGTTTAGAAGCACTTGTCTTCCTGGGATCTTATCCAGCTTGGAGCTGTTCTTaGGCCTTGGCTTCTCGTTCA +
Preference number: 4 (lower is better)
Translates to: NFAIFEGLEALVFLGSYPAWSCS*ALASRS
Trigger: TGAACGAGAAGCCAAGGCTCAAGAACAGCTCCAAGC...TGGATAAGATCCCAGGAAGACAAGTGCTTCTAAACCTTCAAAGATGGCAAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333010.6
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp AGCATATATTGTAGATTTTCAACAGGGTTGTGTAGGAACTGTCAAGTAAGAAACGAATCCTGCCCTTTCTaGGCCAGAGTCGCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: SIYCRFSTGLCRNCQVRNESCPF*ARVASR
Trigger: CCTGGAAGCGACTCTGGCTCAGAAAGGGCAGGATTC...GTTTCTTACTTGACAGTTCCTACACAACCCTGTTGAAAATCTACAATATATGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000333010.6
ENST00000616793.5
CDS-3UTR TCA 90 bp ATGAATGAGATCAGTCCATTGTTGATAGAGGAATGCAGATGTGAGAGTAGGACAATCTTCTACCCAGTGTaGATCCTGCCCTTTCTGAGC +
Preference number: 4 (lower is better)
Translates to: MNEISPLLIEECRCESRTIFYPV*ILPFLS
Trigger: GCTCAGAAAGGGCAGGATTCACACTGGGTAGAAGAT...TGTCCTACTCTCACATCTGCATTCCTCTATCAACAATGGACTGATCTCATTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265272.9
ENST00000616793.5
CDS-3UTR TCA 90 bp AAGGAAGCATCGAATCTGCTTTTATTTCACATGTCACATTCGCTCGGGTCCTTTAGCACTCACACCATCTaGGAATGGGTGAATTTGGAG +
Preference number: 4 (lower is better)
Translates to: KEASNLLLFHMSHSLGSFSTHTI*EWVNLE
Trigger: CTCCAAATTCACCCATTCTCAGATGGTGTGAGTGCT...AAAGGACCCGAGCGAATGTGACATGTGAAATAAAAGCAGATTCGATGCTTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp ATGAATGAGATCAGTCCATTGTTGATAGAGGAATGCAGATGTGAGAGTAGGACACTGTCGTCTGTGGAATaGATTCCACAAGCTCCACCT +
Preference number: 4 (lower is better)
Translates to: MNEISPLLIEECRCESRTLSSVE*IPQAPP
Trigger: AGGTGGAGCTTGTGGAATTCATTCCACAGACGACAG...TGTCCTACTCTCACATCTGCATTCCTCTATCAACAATGGACTGATCTCATTCAT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp TTAATGACTGGCTCTCCTGTGGTAAAAGTGGGGTTCTGTATGATGGCATGCATAAAGTGGGGTTCTGTATaGTGGCATGCATATGCAATC +
Preference number: 4 (lower is better)
Translates to: LMTGSPVVKVGFCMMACIKWGSV*WHAYAI
Trigger: GATTGCATATGCATGCCATCATACAGAACCCCACTT...TATGCATGCCATCATACAGAACCCCACTTTTACCACAGGAGAGCCAGTCATTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp AATTTTGCCATCTTTGAAGGTTTAGAAGCACTTGTCTTCCTGGGATCTTATCCAGGCAGGAGAATCACTTaGATCCAGGAGGTGGAGCTT +
Preference number: 4 (lower is better)
Translates to: NFAIFEGLEALVFLGSYPGRRIT*IQEVEL
Trigger: AAGCTCCACCTCCTGGATTCAAGTGATTCTCCTGCC...TGGATAAGATCCCAGGAAGACAAGTGCTTCTAAACCTTCAAAGATGGCAAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp GTAAAAGTGGGGTTCTGTATGATGGCATGCATATGCAATCAAGAGAGCTGGGAGTGGAACCTACCTAGTTaGATAAAGAATCCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: VKVGFCMMACICNQESWEWNLPS*IKNPAG
Trigger: TCCTGCTGGATTCTTTATTCAACTAGGTAGGTTCCA...CTCCCAGCTCTCTTGATTGCATATGCATGCCATCATACAGAACCCCACTTTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp TTAATGACTGGCTCTCCTGTGGTAAAAGTGGGGTTCTGTATGATGGCATGCATACACATACAACCTGTATaGGCAGTTATTTGTGGGCCA +
Preference number: 4 (lower is better)
Translates to: LMTGSPVVKVGFCMMACIHIQPV*AVICGP
Trigger: TGGCCCACAAATAACTGCTCATACAGGTTGTATGTG...TATGCATGCCATCATACAGAACCCCACTTTTACCACAGGAGAGCCAGTCATTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616793.5
CDS-3UTR TCA 90 bp AGGTGTGTGTTGGAGCAGACGGAATATAGATTTACTCATATGGGCCCTGCAACAGGCAGTAGAACACAATaGCATCTTTCCTCACTTAAG +
Preference number: 4 (lower is better)
Translates to: RCVLEQTEYRFTHMGPATGSRTQ*HLSSLK
Trigger: CTTAAGTGAGGAAAGATGTCATTGTGTTCTACTGCC...TGTTGCAGGGCCCATATGAGTAAATCTATATTCCGTCTGCTCCAACACACACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616793.5
CDS-3UTR TCA 90 bp TCAAGTTGGCTAGTGTTGGGTCACCAACACTGTAGAGGCACCCTCTTTCACATTTACTGTAGATTGTGCTaGACTTTCTGTTGCTCTTTC +
Preference number: 4 (lower is better)
Translates to: SSWLVLGHQHCRGTLFHIYCRLC*TFCCSF
Trigger: GAAAGAGCAACAGAAAGTTCAGCACAATCTACAGTA...AATGTGAAAGAGGGTGCCTCTACAGTGTTGGTGACCCAACACTAGCCAACTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616793.5
CDS-3UTR GCA 90 bp TCAAGTTGGCTAGTGTTGGGTCACCAACACTGTAGAGGCACCCTCTTTCACATTTTTCTTTCAAGCAGGTaGTGCCATGTTACTGTTTCT +
Preference number: 4 (lower is better)
Translates to: SSWLVLGHQHCRGTLFHIFLSSR*CHVTVS
Trigger: AGAAACAGTAACATGGCAGCACCTGCTTGAAAGAAA...AATGTGAAAGAGGGTGCCTCTACAGTGTTGGTGACCCAACACTAGCCAACTTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR GCA 90 bp AGCATATATTGTAGATTTTCAACAGGGTTGTGTAGGAACTGTCAAGTAAGAAACACCGTGTGCTTGCGCTaGTCCAGCTCACGAATCCTC +
Preference number: 4 (lower is better)
Translates to: SIYCRFSTGLCRNCQVRNTVCLR*SSSRIL
Trigger: GAGGATTCGTGAGCTGGAGCAGCGCAAGCACACGGT...GTTTCTTACTTGACAGTTCCTACACAACCCTGTTGAAAATCTACAATATATGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265272.9
ENST00000333010.6
ENST00000507386.5
ENST00000616793.5
CDS-3UTR GCA 90 bp CAAACTTTATTTCTCCTATTACTAGTGGAGAACACATTTGCTCTCTACCTAAGTACCGTGTGCTTGCGCTaGTCCAGCTCACGAATCCTC +
Preference number: 4 (lower is better)
Translates to: QTLFLLLLVENTFALYLSTVCLR*SSSRIL
Trigger: GAGGATTCGTGAGCTGGAGCAGCGCAAGCACACGGT...ACTTAGGTAGAGAGCAAATGTGTTCTCCACTAGTAATAGGAGAAATAAAGTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616793.5
CDS-3UTR GCA 90 bp ATCCACTCTTTAGTAAGTTCGTGGGATCTTGATTGTGGGCAAAATTGGGCTCAAATTTCCTGCTCGTGCTaGTTGATAAGGTTCTCCCTC +
Preference number: 4 (lower is better)
Translates to: IHSLVSSWDLDCGQNWAQISCSC*LIRFSL
Trigger: GAGGGAGAACCTTATCAAGCAGCACGAGCAGGAAAT...TTGAGCCCAATTTTGCCCACAATCAAGATCCCACGAACTTACTAAAGAGTGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616793.5
CDS-3UTR GCA 90 bp TGCTTTTATTTCACATGTCACATTCGCTCGGGTCCTTTGACTTCGTTACCAGTTGTCCTTGACATTTCCTaGTCGTGCTGCTTGATAAGG +
Preference number: 4 (lower is better)
Translates to: CFYFTCHIRSGPLTSLPVVLDIS*SCCLIR
Trigger: CCTTATCAAGCAGCACGAGCAGGAAATGTCAAGGAC...AACTGGTAACGAAGTCAAAGGACCCGAGCGAATGTGACATGTGAAATAAAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR GCA 90 bp GAGGCTCATGAGCAAGAGTTGGTAAAAATTACAGTTCAGTCTATAGTCTTGAGATTACTTTGTCACTGCTaGCGTCGCGGAGAGCACAGA +
Preference number: 4 (lower is better)
Translates to: EAHEQELVKITVQSIVLRLLCHC*RRGEHR
Trigger: TCTGTGCTCTCCGCGACGGCAGCAGTGACAAAGTAA...TCTCAAGACTATAGACTGAACTGTAATTTTTACCAACTCTTGCTCATGAGCCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR GCA 90 bp GACCCCAGCATTCTAGTTTTTATTGTACATTCTTCAGTTATTGTTCTGGCTTTGTCCTTACTTTGTCACTaGTGCCGTCGCGGAGAGCAC +
Preference number: 4 (lower is better)
Translates to: DPSILVFIVHSSVIVLALSLLCH*CRRGEH
Trigger: GTGCTCTCCGCGACGGCAGCAGTGACAAAGTAAGGA...CAAAGCCAGAACAATAACTGAAGAATGTACAATAAAAACTAGAATGCTGGGGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR GCA 90 bp GACCCCAGCATTCTAGTTTTTATTGTACATTCTTCAGTTATTGTTCTGGCTTTGAGAGCCTCGTCCACCTaGTTCTTGGCCGTTTTCAGG +
Preference number: 4 (lower is better)
Translates to: DPSILVFIVHSSVIVLALRASST*FLAVFR
Trigger: CCTGAAAACGGCCAAGAAGCAGGTGGACGAGGCTCT...CAAAGCCAGAACAATAACTGAAGAATGTACAATAAAAACTAGAATGCTGGGGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR GCA 90 bp ATGAATGAGATCAGTCCATTGTTGATAGAGGAATGCAGATGTGAGAGTAGGACACTGCTTGGATCATATTaGTCAGAGCCTCGTCCACCT +
Preference number: 4 (lower is better)
Translates to: MNEISPLLIEECRCESRTLLGSY*SEPRPP
Trigger: AGGTGGACGAGGCTCTGAGCAATATGATCCAAGCAG...TGTCCTACTCTCACATCTGCATTCCTCTATCAACAATGGACTGATCTCATTCAT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR GCA 90 bp TGCTTTTATTTCACATGTCACATTCGCTCGGGTCCTTTGACTTCGTTACCAGTTTTCGCAAATCAGGACTaGTGCAGTGTTCGGAACCAT +
Preference number: 4 (lower is better)
Translates to: CFYFTCHIRSGPLTSLPVFANQD*CSVRNH
Trigger: ATGGTTCCGAACACTGCAGCAGTCCTGATTTGCGAA...AACTGGTAACGAAGTCAAAGGACCCGAGCGAATGTGACATGTGAAATAAAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR GCA 90 bp AGGTGTGTGTTGGAGCAGACGGAATATAGATTTACTCATATGGGCCCTGCAACATTAGTTTTTCTTCCATaGGCTGCAAGGACACCATCA +
Preference number: 4 (lower is better)
Translates to: RCVLEQTEYRFTHMGPATLVFLP*AARTPS
Trigger: TGATGGTGTCCTTGCAGCGCATGGAAGAAAAACTAA...TGTTGCAGGGCCCATATGAGTAAATCTATATTCCGTCTGCTCCAACACACACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR GCA 90 bp GTAAAAGTGGGGTTCTGTATGATGGCATGCATATGCAATCAAGAGAGCTGGGAGTTAGTTTTTCTTCCATaGGCTGCAAGGACACCATCA +
Preference number: 4 (lower is better)
Translates to: VKVGFCMMACICNQESWELVFLP*AARTPS
Trigger: TGATGGTGTCCTTGCAGCGCATGGAAGAAAAACTAA...CTCCCAGCTCTCTTGATTGCATATGCATGCCATCATACAGAACCCCACTTTTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR GCA 90 bp ATGAATGAGATCAGTCCATTGTTGATAGAGGAATGCAGATGTGAGAGTAGGACATCAGCTCCTTCAATCTaGTGGATCCACTTCTCTGCC +
Preference number: 4 (lower is better)
Translates to: MNEISPLLIEECRCESRTSAPSI*WIHFSA
Trigger: GGCAGAGAAGTGGATCCAGCAGATTGAAGGAGCTGA...TGTCCTACTCTCACATCTGCATTCCTCTATCAACAATGGACTGATCTCATTCAT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR GCA 90 bp GGCACAGAGAGGTTAAGTGACTGGGCCAAAGATACCTGGGTCAGCAGTAAATGTAGGAAGCATCGAATCTaGTTTTATTTCACATGTCAC +
Preference number: 4 (lower is better)
Translates to: GTERLSDWAKDTWVSSKCRKHRI*FYFTCH
Trigger: GTGACATGTGAAATAAAAGCAGATTCGATGCTTCCT...ACATTTACTGCTGACCCAGGTATCTTTGGCCCAGTCACTTAACCTCTCTGTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR GCA 90 bp ACTGGCTCTCCTGTGGTAAAAGTGGGGTTCTGTATGATGGCATGCATATGCAATAAGAAGAGGTCAGAATaGTCTAGGCATGTGAGGATT +
Preference number: 4 (lower is better)
Translates to: TGSPVVKVGFCMMACICNKKRSE*SRHVRI
Trigger: AATCCTCACATGCCTAGAGCATTCTGACCTCTTCTT...ATTGCATATGCATGCCATCATACAGAACCCCACTTTTACCACAGGAGAGCCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR GCA 90 bp ACTGGCTCTCCTGTGGTAAAAGTGGGGTTCTGTATGATGGCATGCATATGCAATGTAGAGCTATCTTGTTaGTGTCATCTGTCTGGGAAA +
Preference number: 4 (lower is better)
Translates to: TGSPVVKVGFCMMACICNVELSC*CHLSGK
Trigger: TTTCCCAGACAGATGACAGCAACAAGATAGCTCTAC...ATTGCATATGCATGCCATCATACAGAACCCCACTTTTACCACAGGAGAGCCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR GCA 90 bp TTAATGACTGGCTCTCCTGTGGTAAAAGTGGGGTTCTGTATGATGGCATGCATAATGATGGCATGCATATaGAATCAAGAGAGCTGGGAG +
Preference number: 4 (lower is better)
Translates to: LMTGSPVVKVGFCMMACIMMACI*NQESWE
Trigger: CTCCCAGCTCTCTTGATTGCATATGCATGCCATCAT...TATGCATGCCATCATACAGAACCCCACTTTTACCACAGGAGAGCCAGTCATTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR GCA 90 bp GTCTTCCTGGGATCTTATCCATGTTTTCGGTTACTCTTTAAGAGGCACCTTGACATGATGGCATGCATATaGAATCAAGAGAGCTGGGAG +
Preference number: 4 (lower is better)
Translates to: VFLGSYPCFRLLFKRHLDMMACI*NQESWE
Trigger: CTCCCAGCTCTCTTGATTGCATATGCATGCCATCAT...GTCAAGGTGCCTCTTAAAGAGTAACCGAAAACATGGATAAGATCCCAGGAAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507386.5
ENST00000616793.5
CDS-3UTR GCA 90 bp TTCAGGAACATACATTTGCTCTCAGAGATGACTCCAAGACTCAGTAATACACAACCGAGATTGTGCCAATaGACTCCAGCATGGGCAACA +
Preference number: 4 (lower is better)
Translates to: FRNIHLLSEMTPRLSNTQPRLCQ*TPAWAT
Trigger: TGTTGCCCATGCTGGAGTGCATTGGCACAATCTCGG...TTGTGTATTACTGAGTCTTGGAGTCATCTCTGAGAGCAAATGTATGTTCCTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR GCA 90 bp GAGGCTCATGAGCAAGAGTTGGTAAAAATTACAGTTCAGTCTATAGTCTTGAGACATGAGCCGAGATTGTaGCAATGCACTCCAGCATGG +
Preference number: 4 (lower is better)
Translates to: EAHEQELVKITVQSIVLRHEPRL*QCTPAW
Trigger: CCATGCTGGAGTGCATTGGCACAATCTCGGCTCATG...TCTCAAGACTATAGACTGAACTGTAATTTTTACCAACTCTTGCTCATGAGCCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR GCA 90 bp GTAAAAGTGGGGTTCTGTATGATGGCATGCATATGCAATCAAGAGAGCTGGGAGAACAAGCAAACCTTTTaGCTGGCCCTAAACACATCT +
Preference number: 4 (lower is better)
Translates to: VKVGFCMMACICNQESWENKQTF*LALNTS
Trigger: AGATGTGTTTAGGGCCAGGCAAAAGGTTTGCTTGTT...CTCCCAGCTCTCTTGATTGCATATGCATGCCATCATACAGAACCCCACTTTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR GCA 90 bp AGGTGTGTGTTGGAGCAGACGGAATATAGATTTACTCATATGGGCCCTGCAACAAACTCAGTAGCCAAATaGATCTCGGTAGTACAGATG +
Preference number: 4 (lower is better)
Translates to: RCVLEQTEYRFTHMGPATNSVAK*ISVVQM
Trigger: CATCTGTACTACCGAGATGCATTTGGCTACTGAGTT...TGTTGCAGGGCCCATATGAGTAAATCTATATTCCGTCTGCTCCAACACACACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616793.5
CDS-3UTR CCA 90 bp TTCAGGAACATACATTTGCTCTCAGAGATGACTCCAAGACTCAGTAATACACAAGCAGACTTGAGCCTCTaGATCTCTCCATCACGTACC +
Preference number: 4 (lower is better)
Translates to: FRNIHLLSEMTPRLSNTQADLSL*ISPSRT
Trigger: GGTACGTGATGGAGAGATCCAGAGGCTCAAGTCTGC...TTGTGTATTACTGAGTCTTGGAGTCATCTCTGAGAGCAAATGTATGTTCCTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CCA 90 bp GTCTTCCTGGGATCTTATCCATGTTTTCGGTTACTCTTTAAGAGGCACCTTGACTGGAATTTCTCGTTTTaGGCTGCTCATGTTGCACTC +
Preference number: 4 (lower is better)
Translates to: VFLGSYPCFRLLFKRHLDWNFSF*AAHVAL
Trigger: GAGTGCAACATGAGCAGCCCAAAACGAGAAATTCCA...GTCAAGGTGCCTCTTAAAGAGTAACCGAAAACATGGATAAGATCCCAGGAAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333010.6
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CCA 90 bp AAGGAAGCATCGAATCTGCTTTTATTTCACATGTCACATTCGCTCGGGTCCTTTATCACCTGCCCTTCCTaGAATTTCTCGTTTTGGGCT +
Preference number: 4 (lower is better)
Translates to: KEASNLLLFHMSHSLGSFITCPS*NFSFWA
Trigger: AGCCCAAAACGAGAAATTCCAGGAAGGGCAGGTGAT...AAAGGACCCGAGCGAATGTGACATGTGAAATAAAAGCAGATTCGATGCTTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CCA 90 bp TCAAGTTGGCTAGTGTTGGGTCACCAACACTGTAGAGGCACCCTCTTTCACATTAACAGGCCTCTTAATTaGCTTGGAACTTCTTCTATG +
Preference number: 4 (lower is better)
Translates to: SSWLVLGHQHCRGTLFHINRPLN*LGTSSM
Trigger: CATAGAAGAAGTTCCAAGCCAATTAAGAGGCCTGTT...AATGTGAAAGAGGGTGCCTCTACAGTGTTGGTGACCCAACACTAGCCAACTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CCA 90 bp TCAAGTTGGCTAGTGTTGGGTCACCAACACTGTAGAGGCACCCTCTTTCACATTAATTTGGAGATTAAATaGAGGGGATCGTCTCTCTCT +
Preference number: 4 (lower is better)
Translates to: SSWLVLGHQHCRGTLFHINLEIK*RGSSLS
Trigger: AGAGAGAGACGATCCCCTCCATTTAATCTCCAAATT...AATGTGAAAGAGGGTGCCTCTACAGTGTTGGTGACCCAACACTAGCCAACTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CCA 90 bp AATTTTGCCATCTTTGAAGGTTTAGAAGCACTTGTCTTCCTGGGATCTTATCCAGGGACAGCACAGTGCTaGCCTGAATTATGGCCACTT +
Preference number: 4 (lower is better)
Translates to: NFAIFEGLEALVFLGSYPGTAQC*PELWPL
Trigger: AAGTGGCCATAATTCAGGCCAGCACTGTGCTGTCCC...TGGATAAGATCCCAGGAAGACAAGTGCTTCTAAACCTTCAAAGATGGCAAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333010.6
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CCA 90 bp GAGGCTCATGAGCAAGAGTTGGTAAAAATTACAGTTCAGTCTATAGTCTTGAGAGGGACAGCACAGTGCTaGCCTGAATTATGGCCACTT +
Preference number: 4 (lower is better)
Translates to: EAHEQELVKITVQSIVLRGTAQC*PELWPL
Trigger: AAGTGGCCATAATTCAGGCCAGCACTGTGCTGTCCC...TCTCAAGACTATAGACTGAACTGTAATTTTTACCAACTCTTGCTCATGAGCCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CCA 90 bp GTCTTCCTGGGATCTTATCCATGTTTTCGGTTACTCTTTAAGAGGCACCTTGACAATTCCATCATTTTCTaGTGTAGGGCAGCCTCAGCT +
Preference number: 4 (lower is better)
Translates to: VFLGSYPCFRLLFKRHLDNSIIF*CRAASA
Trigger: AGCTGAGGCTGCCCTACACCAGAAAATGATGGAATT...GTCAAGGTGCCTCTTAAAGAGTAACCGAAAACATGGATAAGATCCCAGGAAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333010.6
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CCA 90 bp TTAATGACTGGCTCTCCTGTGGTAAAAGTGGGGTTCTGTATGATGGCATGCATATTCAGAGATGCTCTCTaGCCCATGTTCCCTATAGAT +
Preference number: 4 (lower is better)
Translates to: LMTGSPVVKVGFCMMACIFRDAL*PMFPID
Trigger: ATCTATAGGGAACATGGGCCAGAGAGCATCTCTGAA...TATGCATGCCATCATACAGAACCCCACTTTTACCACAGGAGAGCCAGTCATTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CCA 90 bp GTAAAAGTGGGGTTCTGTATGATGGCATGCATATGCAATCAAGAGAGCTGGGAGATATTCACATCTCTGTaGCAAACCCGACTCTTGGTA +
Preference number: 4 (lower is better)
Translates to: VKVGFCMMACICNQESWEIFTSL*QTRLLV
Trigger: TACCAAGAGTCGGGTTTGCCACAGAGATGTGAATAT...CTCCCAGCTCTCTTGATTGCATATGCATGCCATCATACAGAACCCCACTTTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CCA 90 bp GTAAAAGTGGGGTTCTGTATGATGGCATGCATATGCAATCAAGAGAGCTGGGAGTTTTCTGACTCAAGTTaGCTAGTGTTGGGTCACCAA +
Preference number: 4 (lower is better)
Translates to: VKVGFCMMACICNQESWEFSDSS*LVLGHQ
Trigger: TTGGTGACCCAACACTAGCCAACTTGAGTCAGAAAA...CTCCCAGCTCTCTTGATTGCATATGCATGCCATCATACAGAACCCCACTTTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CCA 90 bp AGGTGTGTGTTGGAGCAGACGGAATATAGATTTACTCATATGGGCCCTGCAACATTTTCTGACTCAAGTTaGCTAGTGTTGGGTCACCAA +
Preference number: 4 (lower is better)
Translates to: RCVLEQTEYRFTHMGPATFSDSS*LVLGHQ
Trigger: TTGGTGACCCAACACTAGCCAACTTGAGTCAGAAAA...TGTTGCAGGGCCCATATGAGTAAATCTATATTCCGTCTGCTCCAACACACACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CCA 90 bp AGGTGTGTGTTGGAGCAGACGGAATATAGATTTACTCATATGGGCCCTGCAACAAAGGAAGGTGTGTGTTaGAGCAGACGGAATATAGAT +
Preference number: 4 (lower is better)
Translates to: RCVLEQTEYRFTHMGPATKEGVC*SRRNID
Trigger: ATCTATATTCCGTCTGCTCCAACACACACCTTCCTT...TGTTGCAGGGCCCATATGAGTAAATCTATATTCCGTCTGCTCCAACACACACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CCA 90 bp AGGTGTGTGTTGGAGCAGACGGAATATAGATTTACTCATATGGGCCCTGCAACAATCAGCTCTACCTTATaGACTTGGGAAGACACATAC +
Preference number: 4 (lower is better)
Translates to: RCVLEQTEYRFTHMGPATISSTL*TWEDTY
Trigger: GTATGTGTCTTCCCAAGTCCATAAGGTAGAGCTGAT...TGTTGCAGGGCCCATATGAGTAAATCTATATTCCGTCTGCTCCAACACACACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616793.5
CDS-3UTR CCA 90 bp GTAAAAGTGGGGTTCTGTATGATGGCATGCATATGCAATCAAGAGAGCTGGGAGGCTGGTTTATGGGCCTaGATAATTGAAAAACCGAGT +
Preference number: 4 (lower is better)
Translates to: VKVGFCMMACICNQESWEAGLWA*IIEKPS
Trigger: ACTCGGTTTTTCAATTATCCAGGCCCATAAACCAGC...CTCCCAGCTCTCTTGATTGCATATGCATGCCATCATACAGAACCCCACTTTTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000616793.5
CDS-3UTR TCA 90 bp TTCAGGAACATACATTTGCTCTCAGAGATGACTCCAAGACTCAGTAATACACAATCTTCATTGGCAGCTTaGAGGGCAACAATGAGTGCC +
Preference number: 4 (lower is better)
Translates to: FRNIHLLSEMTPRLSNTQSSLAA*RATMSA
Trigger: GGCACTCATTGTTGCCCTTCAAGCTGCCAATGAAGA...TTGTGTATTACTGAGTCTTGGAGTCATCTCTGAGAGCAAATGTATGTTCCTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp AGCATATATTGTAGATTTTCAACAGGGTTGTGTAGGAACTGTCAAGTAAGAAACCATGGAGCTTGGCTTTaGGTTCTGTCACCAGCACCG +
Preference number: 4 (lower is better)
Translates to: SIYCRFSTGLCRNCQVRNHGAWL*VLSPAP
Trigger: CGGTGCTGGTGACAGAACTCAAAGCCAAGCTCCATG...GTTTCTTACTTGACAGTTCCTACACAACCCTGTTGAAAATCTACAATATATGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265272.9
ENST00000333010.6
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp GACCCCAGCATTCTAGTTTTTATTGTACATTCTTCAGTTATTGTTCTGGCTTTGCACAGAGAGCAGACTTaGGCCTCTGGATCTCTCCAT +
Preference number: 4 (lower is better)
Translates to: DPSILVFIVHSSVIVLALHREQT*ASGSLH
Trigger: ATGGAGAGATCCAGAGGCTCAAGTCTGCTCTCTGTG...CAAAGCCAGAACAATAACTGAAGAATGTACAATAAAAACTAGAATGCTGGGGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp GACCCCAGCATTCTAGTTTTTATTGTACATTCTTCAGTTATTGTTCTGGCTTTGGCTCCGACTCCCACTTaGTCTTCGAGATGGCTTCTT +
Preference number: 4 (lower is better)
Translates to: DPSILVFIVHSSVIVLALAPTPT*SSRWLL
Trigger: AAGAAGCCATCTCGAAGATCAAGTGGGAGTCGGAGC...CAAAGCCAGAACAATAACTGAAGAATGTACAATAAAAACTAGAATGCTGGGGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp TGCTTTTATTTCACATGTCACATTCGCTCGGGTCCTTTGACTTCGTTACCAGTTTCCAAAGCCTCCTTCTaGAGTTGGAGTTTCTGTACA +
Preference number: 4 (lower is better)
Translates to: CFYFTCHIRSGPLTSLPVSKASF*SWSFCT
Trigger: TGTACAGAAACTCCAACTTCAGAAGGAGGCTTTGGA...AACTGGTAACGAAGTCAAAGGACCCGAGCGAATGTGACATGTGAAATAAAAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp GAGGCTCATGAGCAAGAGTTGGTAAAAATTACAGTTCAGTCTATAGTCTTGAGATGCACTCAGCCTCCTTaGCCAGAAAGAGTTGTTCGT +
Preference number: 4 (lower is better)
Translates to: EAHEQELVKITVQSIVLRCTQPP*PERVVR
Trigger: ACGAACAACTCTTTCTGGTCAAGGAGGCTGAGTGCA...TCTCAAGACTATAGACTGAACTGTAATTTTTACCAACTCTTGCTCATGAGCCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp TCAAGTTGGCTAGTGTTGGGTCACCAACACTGTAGAGGCACCCTCTTTCACATTTCAGCTATTCTCTTTTaGTTTCTTCGCAAATCAGGA +
Preference number: 4 (lower is better)
Translates to: SSWLVLGHQHCRGTLFHISAILF*FLRKSG
Trigger: TCCTGATTTGCGAAGAAATCAAAAGAGAATAGCTGA...AATGTGAAAGAGGGTGCCTCTACAGTGTTGGTGACCCAACACTAGCCAACTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp AATTTTGCCATCTTTGAAGGTTTAGAAGCACTTGTCTTCCTGGGATCTTATCCAGCTTTCTTCTACGGATaGGCTTTTCTCGGTCCCTTG +
Preference number: 4 (lower is better)
Translates to: NFAIFEGLEALVFLGSYPAFFYG*AFLGPL
Trigger: CAAGGGACCGAGAAAAGCTCATCCGTAGAAGAAAGC...TGGATAAGATCCCAGGAAGACAAGTGCTTCTAAACCTTCAAAGATGGCAAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333010.6
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp AATTTTGCCATCTTTGAAGGTTTAGAAGCACTTGTCTTCCTGGGATCTTATCCAATCTTCTACCCAGTGTaGATCCTGCCCTTTCTGAGC +
Preference number: 4 (lower is better)
Translates to: NFAIFEGLEALVFLGSYPIFYPV*ILPFLS
Trigger: GCTCAGAAAGGGCAGGATTCACACTGGGTAGAAGAT...TGGATAAGATCCCAGGAAGACAAGTGCTTCTAAACCTTCAAAGATGGCAAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333010.6
ENST00000616793.5
CDS-3UTR TCA 90 bp TTAATGACTGGCTCTCCTGTGGTAAAAGTGGGGTTCTGTATGATGGCATGCATATCTTGTTGTAACCGGTaGTTTTCTGCCTCCTGTTTT +
Preference number: 4 (lower is better)
Translates to: LMTGSPVVKVGFCMMACISCCNR*FSASCF
Trigger: AAAACAGGAGGCAGAAAATCACCGGTTACAACAAGA...TATGCATGCCATCATACAGAACCCCACTTTTACCACAGGAGAGCCAGTCATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp AATTTTGCCATCTTTGAAGGTTTAGAAGCACTTGTCTTCCTGGGATCTTATCCAAGCACAGTGCTGGCCTaGATTATGGCCACTTGTTCT +
Preference number: 4 (lower is better)
Translates to: NFAIFEGLEALVFLGSYPSTVLA*IMATCS
Trigger: AGAACAAGTGGCCATAATTCAGGCCAGCACTGTGCT...TGGATAAGATCCCAGGAAGACAAGTGCTTCTAAACCTTCAAAGATGGCAAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333010.6
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp TGCTTTTATTTCACATGTCACATTCGCTCGGGTCCTTTGACTTCGTTACCAGTTGTAGTTCTTAGCTTTTaGTCTCCCTCTCACTGGTGT +
Preference number: 4 (lower is better)
Translates to: CFYFTCHIRSGPLTSLPVVVLSF*SPSHWC
Trigger: ACACCAGTGAGAGGGAGATCAAAAGCTAAGAACTAC...AACTGGTAACGAAGTCAAAGGACCCGAGCGAATGTGACATGTGAAATAAAAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp AGGTGTGTGTTGGAGCAGACGGAATATAGATTTACTCATATGGGCCCTGCAACACTGCACAGCAGGGGTTaGATATTTCATTGTAACTTT +
Preference number: 4 (lower is better)
Translates to: RCVLEQTEYRFTHMGPATLHSRG*IFHCNF
Trigger: AAAGTTACAATGAAATATTCAACCCCTGCTGTGCAG...TGTTGCAGGGCCCATATGAGTAAATCTATATTCCGTCTGCTCCAACACACACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp ATGAATGAGATCAGTCCATTGTTGATAGAGGAATGCAGATGTGAGAGTAGGACATTCGCTCGGGTCCTTTaGCTTCGTTACCAGTTTTGT +
Preference number: 4 (lower is better)
Translates to: MNEISPLLIEECRCESRTFARVL*LRYQFC
Trigger: ACAAAACTGGTAACGAAGTCAAAGGACCCGAGCGAA...TGTCCTACTCTCACATCTGCATTCCTCTATCAACAATGGACTGATCTCATTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp ACTGGCTCTCCTGTGGTAAAAGTGGGGTTCTGTATGATGGCATGCATATGCAATAAGTCAGGGAGCATGTaGTTTACAGTATCATCTTCT +
Preference number: 4 (lower is better)
Translates to: TGSPVVKVGFCMMACICNKSGSM*FTVSSS
Trigger: AGAAGATGATACTGTAAATCACATGCTCCCTGACTT...ATTGCATATGCATGCCATCATACAGAACCCCACTTTTACCACAGGAGAGCCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp GTAAAAGTGGGGTTCTGTATGATGGCATGCATATGCAATCAAGAGAGCTGGGAGAAGTCAGGGAGCATGTaGTTTACAGTATCATCTTCT +
Preference number: 4 (lower is better)
Translates to: VKVGFCMMACICNQESWEKSGSM*FTVSSS
Trigger: AGAAGATGATACTGTAAATCACATGCTCCCTGACTT...CTCCCAGCTCTCTTGATTGCATATGCATGCCATCATACAGAACCCCACTTTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp AATTTTGCCATCTTTGAAGGTTTAGAAGCACTTGTCTTCCTGGGATCTTATCCACACAGAGAGGTTAAGTaGCTGGGCCAAAGATACCTG +
Preference number: 4 (lower is better)
Translates to: NFAIFEGLEALVFLGSYPHREVK*LGQRYL
Trigger: CAGGTATCTTTGGCCCAGTCACTTAACCTCTCTGTG...TGGATAAGATCCCAGGAAGACAAGTGCTTCTAAACCTTCAAAGATGGCAAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp AAGGAAGCATCGAATCTGCTTTTATTTCACATGTCACATTCGCTCGGGTCCTTTAAGTGGGGTTCTGTATaGTGGCATGCATATGCAATC +
Preference number: 4 (lower is better)
Translates to: KEASNLLLFHMSHSLGSFKWGSV*WHAYAI
Trigger: GATTGCATATGCATGCCATCATACAGAACCCCACTT...AAAGGACCCGAGCGAATGTGACATGTGAAATAAAAGCAGATTCGATGCTTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp TTAATGACTGGCTCTCCTGTGGTAAAAGTGGGGTTCTGTATGATGGCATGCATATGGAACCTACCTAGTTaGATAAAGAATCCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: LMTGSPVVKVGFCMMACIWNLPS*IKNPAG
Trigger: TCCTGCTGGATTCTTTATTCAACTAGGTAGGTTCCA...TATGCATGCCATCATACAGAACCCCACTTTTACCACAGGAGAGCCAGTCATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp AGGTGTGTGTTGGAGCAGACGGAATATAGATTTACTCATATGGGCCCTGCAACACTCTTCCATATTTTCTaGCTCAAGTTGGCTAGTGTT +
Preference number: 4 (lower is better)
Translates to: RCVLEQTEYRFTHMGPATLFHIF*LKLASV
Trigger: AACACTAGCCAACTTGAGTCAGAAAATATGGAAGAG...TGTTGCAGGGCCCATATGAGTAAATCTATATTCCGTCTGCTCCAACACACACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp AGGTGTGTGTTGGAGCAGACGGAATATAGATTTACTCATATGGGCCCTGCAACAGCTGTTGTTCTCATATaGCTTATAGCAGATAAGCAG +
Preference number: 4 (lower is better)
Translates to: RCVLEQTEYRFTHMGPATAVVLI*LIADKQ
Trigger: CTGCTTATCTGCTATAAGTCATATGAGAACAACAGC...TGTTGCAGGGCCCATATGAGTAAATCTATATTCCGTCTGCTCCAACACACACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR GCA 90 bp AGCATATATTGTAGATTTTCAACAGGGTTGTGTAGGAACTGTCAAGTAAGAAACAAGCAGCCAGGAACTTaGAGCAGACACCTCCTCTGG +
Preference number: 4 (lower is better)
Translates to: SIYCRFSTGLCRNCQVRNKQPGT*SRHLLW
Trigger: CCAGAGGAGGTGTCTGCTGCAAGTTCCTGGCTGCTT...GTTTCTTACTTGACAGTTCCTACACAACCCTGTTGAAAATCTACAATATATGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265272.9
ENST00000333010.6
CDS-3UTR GCA 90 bp TTAAGTGACTGGGCCAAAGATACCTGGGTCAGCAGTAAATGTAAGAACAAAAAGGACATTTCCTGCTCGTaGTGCTTGATAAGGTTCTCC +
Preference number: 4 (lower is better)
Translates to: LSDWAKDTWVSSKCKNKKDISCS*CLIRFS
Trigger: GGAGAACCTTATCAAGCAGCACGAGCAGGAAATGTC...CTTTTTGTTCTTACATTTACTGCTGACCCAGGTATCTTTGGCCCAGTCACTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR GCA 90 bp AGCATATATTGTAGATTTTCAACAGGGTTGTGTAGGAACTGTCAAGTAAGAAACAGAGCCTCGTCCACCTaGTTCTTGGCCGTTTTCAGG +
Preference number: 4 (lower is better)
Translates to: SIYCRFSTGLCRNCQVRNRASST*FLAVFR
Trigger: CCTGAAAACGGCCAAGAAGCAGGTGGACGAGGCTCT...GTTTCTTACTTGACAGTTCCTACACAACCCTGTTGAAAATCTACAATATATGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265272.9
ENST00000333010.6
ENST00000507386.5
ENST00000616793.5
CDS-3UTR GCA 90 bp AATTTTGCCATCTTTGAAGGTTTAGAAGCACTTGTCTTCCTGGGATCTTATCCACTGCTTGGATCATATTaGTCAGAGCCTCGTCCACCT +
Preference number: 4 (lower is better)
Translates to: NFAIFEGLEALVFLGSYPLLGSY*SEPRPP
Trigger: AGGTGGACGAGGCTCTGAGCAATATGATCCAAGCAG...TGGATAAGATCCCAGGAAGACAAGTGCTTCTAAACCTTCAAAGATGGCAAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333010.6
ENST00000507386.5
ENST00000616793.5
CDS-3UTR GCA 90 bp TTCAGGAACATACATTTGCTCTCAGAGATGACTCCAAGACTCAGTAATACACAAGCAAATCAGGACTGCTaGAGTGTTCGGAACCATCAC +
Preference number: 4 (lower is better)
Translates to: FRNIHLLSEMTPRLSNTQANQDC*SVRNHH
Trigger: GTGATGGTTCCGAACACTGCAGCAGTCCTGATTTGC...TTGTGTATTACTGAGTCTTGGAGTCATCTCTGAGAGCAAATGTATGTTCCTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR GCA 90 bp TTAAGTGACTGGGCCAAAGATACCTGGGTCAGCAGTAAATGTAAGAACAAAAAGTTCGCAAATCAGGACTaGTGCAGTGTTCGGAACCAT +
Preference number: 4 (lower is better)
Translates to: LSDWAKDTWVSSKCKNKKFANQD*CSVRNH
Trigger: ATGGTTCCGAACACTGCAGCAGTCCTGATTTGCGAA...CTTTTTGTTCTTACATTTACTGCTGACCCAGGTATCTTTGGCCCAGTCACTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR GCA 90 bp GTCTTCCTGGGATCTTATCCATGTTTTCGGTTACTCTTTAAGAGGCACCTTGACTTAGTTTTTCTTCCATaGGCTGCAAGGACACCATCA +
Preference number: 4 (lower is better)
Translates to: VFLGSYPCFRLLFKRHLDLVFLP*AARTPS
Trigger: TGATGGTGTCCTTGCAGCGCATGGAAGAAAAACTAA...GTCAAGGTGCCTCTTAAAGAGTAACCGAAAACATGGATAAGATCCCAGGAAGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000333010.6
ENST00000507386.5
ENST00000616793.5
CDS-3UTR GCA 90 bp AGCATATATTGTAGATTTTCAACAGGGTTGTGTAGGAACTGTCAAGTAAGAAACCTGGATCCACTTCTCTaGCAGGGACAGCACAGTGCT +
Preference number: 4 (lower is better)
Translates to: SIYCRFSTGLCRNCQVRNLDPLL*QGQHSA
Trigger: AGCACTGTGCTGTCCCTGGCAGAGAAGTGGATCCAG...GTTTCTTACTTGACAGTTCCTACACAACCCTGTTGAAAATCTACAATATATGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265272.9
ENST00000333010.6
ENST00000507386.5
ENST00000616793.5
CDS-3UTR GCA 90 bp AATTTTGCCATCTTTGAAGGTTTAGAAGCACTTGTCTTCCTGGGATCTTATCCATCAGCTCCTTCAATCTaGTGGATCCACTTCTCTGCC +
Preference number: 4 (lower is better)
Translates to: NFAIFEGLEALVFLGSYPSAPSI*WIHFSA
Trigger: GGCAGAGAAGTGGATCCAGCAGATTGAAGGAGCTGA...TGGATAAGATCCCAGGAAGACAAGTGCTTCTAAACCTTCAAAGATGGCAAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333010.6
ENST00000507386.5
ENST00000616793.5
CDS-3UTR GCA 90 bp TTAAGTGACTGGGCCAAAGATACCTGGGTCAGCAGTAAATGTAAGAACAAAAAGGACAGTCATACTCTCTaGTCTTCCTCAGCATTTGCC +
Preference number: 4 (lower is better)
Translates to: LSDWAKDTWVSSKCKNKKDSHTL*SSSAFA
Trigger: GGCAAATGCTGAGGAAGAGCAGAGAGTATGACTGTC...CTTTTTGTTCTTACATTTACTGCTGACCCAGGTATCTTTGGCCCAGTCACTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR GCA 90 bp ACTGGCTCTCCTGTGGTAAAAGTGGGGTTCTGTATGATGGCATGCATATGCAATTTGTTGATAGAGGAATaGAGATGTGAGAGTAGGACA +
Preference number: 4 (lower is better)
Translates to: TGSPVVKVGFCMMACICNLLIEE*RCESRT
Trigger: TGTCCTACTCTCACATCTGCATTCCTCTATCAACAA...ATTGCATATGCATGCCATCATACAGAACCCCACTTTTACCACAGGAGAGCCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR GCA 90 bp AGGTGTGTGTTGGAGCAGACGGAATATAGATTTACTCATATGGGCCCTGCAACATTGTTGATAGAGGAATaGAGATGTGAGAGTAGGACA +
Preference number: 4 (lower is better)
Translates to: RCVLEQTEYRFTHMGPATLLIEE*RCESRT
Trigger: TGTCCTACTCTCACATCTGCATTCCTCTATCAACAA...TGTTGCAGGGCCCATATGAGTAAATCTATATTCCGTCTGCTCCAACACACACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR GCA 90 bp GACCCCAGCATTCTAGTTTTTATTGTACATTCTTCAGTTATTGTTCTGGCTTTGCCGAGATTGTGCCAATaGACTCCAGCATGGGCAACA +
Preference number: 4 (lower is better)
Translates to: DPSILVFIVHSSVIVLALPRLCQ*TPAWAT
Trigger: TGTTGCCCATGCTGGAGTGCATTGGCACAATCTCGG...CAAAGCCAGAACAATAACTGAAGAATGTACAATAAAAACTAGAATGCTGGGGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR GCA 90 bp ACTGGCTCTCCTGTGGTAAAAGTGGGGTTCTGTATGATGGCATGCATATGCAATCTCTTTCACATTTCTTaGCTAATGAGCATATGGCTC +
Preference number: 4 (lower is better)
Translates to: TGSPVVKVGFCMMACICNLFHIS*LMSIWL
Trigger: GAGCCATATGCTCATTAGGCAAGAAATGTGAAAGAG...ATTGCATATGCATGCCATCATACAGAACCCCACTTTTACCACAGGAGAGCCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR GCA 90 bp TTAATGACTGGCTCTCCTGTGGTAAAAGTGGGGTTCTGTATGATGGCATGCATAAACAAGCAAACCTTTTaGCTGGCCCTAAACACATCT +
Preference number: 4 (lower is better)
Translates to: LMTGSPVVKVGFCMMACINKQTF*LALNTS
Trigger: AGATGTGTTTAGGGCCAGGCAAAAGGTTTGCTTGTT...TATGCATGCCATCATACAGAACCCCACTTTTACCACAGGAGAGCCAGTCATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR GCA 90 bp AATTTTGCCATCTTTGAAGGTTTAGAAGCACTTGTCTTCCTGGGATCTTATCCAGAGGTCTCACCATGTTaGCCAGGCCGTTATGAAACT +
Preference number: 4 (lower is better)
Translates to: NFAIFEGLEALVFLGSYPEVSPC*PGRYET
Trigger: AGTTTCATAACGGCCTGGGCAACATGGTGAGACCTC...TGGATAAGATCCCAGGAAGACAAGTGCTTCTAAACCTTCAAAGATGGCAAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616793.5
CDS-3UTR GCA 90 bp TTAATGACTGGCTCTCCTGTGGTAAAAGTGGGGTTCTGTATGATGGCATGCATACCTTTCTTGAAGTCCTaGATCCTAGAACAGAAGTAC +
Preference number: 4 (lower is better)
Translates to: LMTGSPVVKVGFCMMACIPFLKS*ILEQKY
Trigger: GTACTTCTGTTCTAGGATGCAGGACTTCAAGAAAGG...TATGCATGCCATCATACAGAACCCCACTTTTACCACAGGAGAGCCAGTCATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616793.5
CDS-3UTR GCA 90 bp ATCCACTCTTTAGTAAGTTCGTGGGATCTTGATTGTGGGCAAAATTGGGCTCAAAAACCGAGTGGTCTCTaGCTCAGTCAACAATTGGAA +
Preference number: 4 (lower is better)
Translates to: IHSLVSSWDLDCGQNWAQKPSGL*LSQQLE
Trigger: TTCCAATTGTTGACTGAGGCAGAGACCACTCGGTTT...TTGAGCCCAATTTTGCCCACAATCAAGATCCCACGAACTTACTAAAGAGTGGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616793.5
CDS-3UTR CCA 90 bp TTAAGTGACTGGGCCAAAGATACCTGGGTCAGCAGTAAATGTAAGAACAAAAAGTCAGCATCTACTGTGTaGTGCTCCTTGGTAAGGTCT +
Preference number: 4 (lower is better)
Translates to: LSDWAKDTWVSSKCKNKKSASTV*CSLVRS
Trigger: AGACCTTACCAAGGAGCACCACACAGTAGATGCTGA...CTTTTTGTTCTTACATTTACTGCTGACCCAGGTATCTTTGGCCCAGTCACTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CCA 90 bp ACTGGCTCTCCTGTGGTAAAAGTGGGGTTCTGTATGATGGCATGCATATGCAATTGTTCTTCATTAGCTTaGTCGAGGTCATTCAGAGAT +
Preference number: 4 (lower is better)
Translates to: TGSPVVKVGFCMMACICNCSSLA*SRSFRD
Trigger: ATCTCTGAATGACCTCGACCAAGCTAATGAAGAACA...ATTGCATATGCATGCCATCATACAGAACCCCACTTTTACCACAGGAGAGCCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CCA 90 bp AGGTGTGTGTTGGAGCAGACGGAATATAGATTTACTCATATGGGCCCTGCAACAATCATCAGGAGTAGCTaGTGTTCTGTCTGTTCTAAA +
Preference number: 4 (lower is better)
Translates to: RCVLEQTEYRFTHMGPATIIRSS*CSVCSK
Trigger: TTTAGAACAGACAGAACACCAGCTACTCCTGATGAT...TGTTGCAGGGCCCATATGAGTAAATCTATATTCCGTCTGCTCCAACACACACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CCA 90 bp AGGTGTGTGTTGGAGCAGACGGAATATAGATTTACTCATATGGGCCCTGCAACACCAGGTCTTCAATTTTaGCTTTATACCTTAGCACCT +
Preference number: 4 (lower is better)
Translates to: RCVLEQTEYRFTHMGPATPGLQF*LYTLAP
Trigger: AGGTGCTAAGGTATAAAGCCAAAATTGAAGACCTGG...TGTTGCAGGGCCCATATGAGTAAATCTATATTCCGTCTGCTCCAACACACACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CCA 90 bp GGCACAGAGAGGTTAAGTGACTGGGCCAAAGATACCTGGGTCAGCAGTAAATGTATTCTCATATATGCTTaGTCAAGAGCTTGTTTTCTG +
Preference number: 4 (lower is better)
Translates to: GTERLSDWAKDTWVSSKCILIYA*SRACFL
Trigger: CAGAAAACAAGCTCTTGACCAAGCATATATGAGAAT...ACATTTACTGCTGACCCAGGTATCTTTGGCCCAGTCACTTAACCTCTCTGTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CCA 90 bp TGCTTTTATTTCACATGTCACATTCGCTCGGGTCCTTTGACTTCGTTACCAGTTTGGGCCAAAGATACCTaGGTCAGCAGTAAATGTAAG +
Preference number: 4 (lower is better)
Translates to: CFYFTCHIRSGPLTSLPVWAKDT*VSSKCK
Trigger: CTTACATTTACTGCTGACCCAGGTATCTTTGGCCCA...AACTGGTAACGAAGTCAAAGGACCCGAGCGAATGTGACATGTGAAATAAAAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CCA 90 bp GAGGCTCATGAGCAAGAGTTGGTAAAAATTACAGTTCAGTCTATAGTCTTGAGAGAGAGGTTAAGTGACTaGGCCAAAGATACCTGGGTC +
Preference number: 4 (lower is better)
Translates to: EAHEQELVKITVQSIVLRERLSD*AKDTWV
Trigger: GACCCAGGTATCTTTGGCCCAGTCACTTAACCTCTC...TCTCAAGACTATAGACTGAACTGTAATTTTTACCAACTCTTGCTCATGAGCCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CCA 90 bp GTCTTCCTGGGATCTTATCCATGTTTTCGGTTACTCTTTAAGAGGCACCTTGACTTTTCTGACTCAAGTTaGCTAGTGTTGGGTCACCAA +
Preference number: 4 (lower is better)
Translates to: VFLGSYPCFRLLFKRHLDFSDSS*LVLGHQ
Trigger: TTGGTGACCCAACACTAGCCAACTTGAGTCAGAAAA...GTCAAGGTGCCTCTTAAAGAGTAACCGAAAACATGGATAAGATCCCAGGAAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CCA 90 bp AGGTGTGTGTTGGAGCAGACGGAATATAGATTTACTCATATGGGCCCTGCAACAACATCTAAAGCTGCTTaGACAATCATCCTAGCTGTT +
Preference number: 4 (lower is better)
Translates to: RCVLEQTEYRFTHMGPATTSKAA*TIILAV
Trigger: AACAGCTAGGATGATTGTCCAAGCAGCTTTAGATGT...TGTTGCAGGGCCCATATGAGTAAATCTATATTCCGTCTGCTCCAACACACACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CCA 90 bp GTAAAAGTGGGGTTCTGTATGATGGCATGCATATGCAATCAAGAGAGCTGGGAGACATCTAAAGCTGCTTaGACAATCATCCTAGCTGTT +
Preference number: 4 (lower is better)
Translates to: VKVGFCMMACICNQESWETSKAA*TIILAV
Trigger: AACAGCTAGGATGATTGTCCAAGCAGCTTTAGATGT...CTCCCAGCTCTCTTGATTGCATATGCATGCCATCATACAGAACCCCACTTTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp AATTTTGCCATCTTTGAAGGTTTAGAAGCACTTGTCTTCCTGGGATCTTATCCAGAAGGTCCCCAGCCTTaGTTTTATCTGCTTGGATCA +
Preference number: 4 (lower is better)
Translates to: NFAIFEGLEALVFLGSYPEGPQP*FYLLGS
Trigger: TGATCCAAGCAGATAAAATCAAGGCTGGGGACCTTC...TGGATAAGATCCCAGGAAGACAAGTGCTTCTAAACCTTCAAAGATGGCAAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000333010.6
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp ACTGGCTCTCCTGTGGTAAAAGTGGGGTTCTGTATGATGGCATGCATATGCAATTCAGCTATTCTCTTTTaGTTTCTTCGCAAATCAGGA +
Preference number: 4 (lower is better)
Translates to: TGSPVVKVGFCMMACICNSAILF*FLRKSG
Trigger: TCCTGATTTGCGAAGAAATCAAAAGAGAATAGCTGA...ATTGCATATGCATGCCATCATACAGAACCCCACTTTTACCACAGGAGAGCCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp AGGTGTGTGTTGGAGCAGACGGAATATAGATTTACTCATATGGGCCCTGCAACATGTTGCTCAATGACCTaGAGTTTTAGAAACTCTGTT +
Preference number: 4 (lower is better)
Translates to: RCVLEQTEYRFTHMGPATCCSMT*SFRNSV
Trigger: AACAGAGTTTCTAAAACTTCAGGTCATTGAGCAACA...TGTTGCAGGGCCCATATGAGTAAATCTATATTCCGTCTGCTCCAACACACACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp TTAATGACTGGCTCTCCTGTGGTAAAAGTGGGGTTCTGTATGATGGCATGCATACCATCTGAGAATGGGTaGATTTGGAGATTAAATGGA +
Preference number: 4 (lower is better)
Translates to: LMTGSPVVKVGFCMMACIPSENG*IWRLNG
Trigger: TCCATTTAATCTCCAAATTCACCCATTCTCAGATGG...TATGCATGCCATCATACAGAACCCCACTTTTACCACAGGAGAGCCAGTCATTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp GTCTTCCTGGGATCTTATCCATGTTTTCGGTTACTCTTTAAGAGGCACCTTGACCCATCTGAGAATGGGTaGATTTGGAGATTAAATGGA +
Preference number: 4 (lower is better)
Translates to: VFLGSYPCFRLLFKRHLDPSENG*IWRLNG
Trigger: TCCATTTAATCTCCAAATTCACCCATTCTCAGATGG...GTCAAGGTGCCTCTTAAAGAGTAACCGAAAACATGGATAAGATCCCAGGAAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333010.6
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp ATGAATGAGATCAGTCCATTGTTGATAGAGGAATGCAGATGTGAGAGTAGGACAGTAGTTCTTAGCTTTTaGTCTCCCTCTCACTGGTGT +
Preference number: 4 (lower is better)
Translates to: MNEISPLLIEECRCESRTVVLSF*SPSHWC
Trigger: ACACCAGTGAGAGGGAGATCAAAAGCTAAGAACTAC...TGTCCTACTCTCACATCTGCATTCCTCTATCAACAATGGACTGATCTCATTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp TTAATGACTGGCTCTCCTGTGGTAAAAGTGGGGTTCTGTATGATGGCATGCATACTGCACAGCAGGGGTTaGATATTTCATTGTAACTTT +
Preference number: 4 (lower is better)
Translates to: LMTGSPVVKVGFCMMACILHSRG*IFHCNF
Trigger: AAAGTTACAATGAAATATTCAACCCCTGCTGTGCAG...TATGCATGCCATCATACAGAACCCCACTTTTACCACAGGAGAGCCAGTCATTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp TTCAGGAACATACATTTGCTCTCAGAGATGACTCCAAGACTCAGTAATACACAATTGTTGTGGTCACTGTaGTCCACTTCTCATCTGTCG +
Preference number: 4 (lower is better)
Translates to: FRNIHLLSEMTPRLSNTQLLWSL*STSHLS
Trigger: CGACAGATGAGAAGTGGATCACAGTGACCACAACAA...TTGTGTATTACTGAGTCTTGGAGTCATCTCTGAGAGCAAATGTATGTTCCTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp AATTTTGCCATCTTTGAAGGTTTAGAAGCACTTGTCTTCCTGGGATCTTATCCATTCGCTCGGGTCCTTTaGCTTCGTTACCAGTTTTGT +
Preference number: 4 (lower is better)
Translates to: NFAIFEGLEALVFLGSYPFARVL*LRYQFC
Trigger: ACAAAACTGGTAACGAAGTCAAAGGACCCGAGCGAA...TGGATAAGATCCCAGGAAGACAAGTGCTTCTAAACCTTCAAAGATGGCAAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp AGGTGTGTGTTGGAGCAGACGGAATATAGATTTACTCATATGGGCCCTGCAACAATCAAGCTAATTATGTaGTACTGTCAGTTTGCTCCA +
Preference number: 4 (lower is better)
Translates to: RCVLEQTEYRFTHMGPATIKLIM*YCQFAP
Trigger: TGGAGCAAACTGACAGTATCACATAATTAGCTTGAT...TGTTGCAGGGCCCATATGAGTAAATCTATATTCCGTCTGCTCCAACACACACCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp TTAATGACTGGCTCTCCTGTGGTAAAAGTGGGGTTCTGTATGATGGCATGCATAGCTGTTGTTCTCATATaGCTTATAGCAGATAAGCAG +
Preference number: 4 (lower is better)
Translates to: LMTGSPVVKVGFCMMACIAVVLI*LIADKQ
Trigger: CTGCTTATCTGCTATAAGTCATATGAGAACAACAGC...TATGCATGCCATCATACAGAACCCCACTTTTACCACAGGAGAGCCAGTCATTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp TTCAGGAACATACATTTGCTCTCAGAGATGACTCCAAGACTCAGTAATACACAACCATGGATCCATGAGTaGCTGGAACACATATCCACA +
Preference number: 4 (lower is better)
Translates to: FRNIHLLSEMTPRLSNTQPWIHE*LEHIST
Trigger: TGTGGATATGTGTTCCAGTCACTCATGGATCCATGG...TTGTGTATTACTGAGTCTTGGAGTCATCTCTGAGAGCAAATGTATGTTCCTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp AATTTTGCCATCTTTGAAGGTTTAGAAGCACTTGTCTTCCTGGGATCTTATCCAATGGGCCTGGATAATTaGAAAACCGAGTGGTCTCTG +
Preference number: 4 (lower is better)
Translates to: NFAIFEGLEALVFLGSYPMGLDN*KTEWSL
Trigger: CAGAGACCACTCGGTTTTTCAATTATCCAGGCCCAT...TGGATAAGATCCCAGGAAGACAAGTGCTTCTAAACCTTCAAAGATGGCAAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616793.5
CDS-3UTR TCA 90 bp AAGGAAGCATCGAATCTGCTTTTATTTCACATGTCACATTCGCTCGGGTCCTTTAGGCTAAAACATGCATaGACCCTGTTGAGATGGAAT +
Preference number: 4 (lower is better)
Translates to: KEASNLLLFHMSHSLGSFRLKHA*TLLRWN
Trigger: ATTCCATCTCAACAGGGTTCATGCATGTTTTAGCCT...AAAGGACCCGAGCGAATGTGACATGTGAAATAAAAGCAGATTCGATGCTTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616793.5
CDS-3UTR GCA 90 bp AATTTTGCCATCTTTGAAGGTTTAGAAGCACTTGTCTTCCTGGGATCTTATCCAATTTCCTGCTCGTGCTaGTTGATAAGGTTCTCCCTC +
Preference number: 4 (lower is better)
Translates to: NFAIFEGLEALVFLGSYPISCSC*LIRFSL
Trigger: GAGGGAGAACCTTATCAAGCAGCACGAGCAGGAAAT...TGGATAAGATCCCAGGAAGACAAGTGCTTCTAAACCTTCAAAGATGGCAAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333010.6
ENST00000507386.5
ENST00000616793.5
CDS-3UTR GCA 90 bp AATTTTGCCATCTTTGAAGGTTTAGAAGCACTTGTCTTCCTGGGATCTTATCCAGTCCTTGACATTTCCTaGTCGTGCTGCTTGATAAGG +
Preference number: 4 (lower is better)
Translates to: NFAIFEGLEALVFLGSYPVLDIS*SCCLIR
Trigger: CCTTATCAAGCAGCACGAGCAGGAAATGTCAAGGAC...TGGATAAGATCCCAGGAAGACAAGTGCTTCTAAACCTTCAAAGATGGCAAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333010.6
ENST00000507386.5
ENST00000616793.5
CDS-3UTR GCA 90 bp AGCATATATTGTAGATTTTCAACAGGGTTGTGTAGGAACTGTCAAGTAAGAAACTTACTTTGTCACTGCTaGCGTCGCGGAGAGCACAGA +
Preference number: 4 (lower is better)
Translates to: SIYCRFSTGLCRNCQVRNLLCHC*RRGEHR
Trigger: TCTGTGCTCTCCGCGACGGCAGCAGTGACAAAGTAA...GTTTCTTACTTGACAGTTCCTACACAACCCTGTTGAAAATCTACAATATATGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265272.9
ENST00000333010.6
ENST00000507386.5
ENST00000616793.5
CDS-3UTR GCA 90 bp GACCCCAGCATTCTAGTTTTTATTGTACATTCTTCAGTTATTGTTCTGGCTTTGGCAAATCAGGACTGCTaGAGTGTTCGGAACCATCAC +
Preference number: 4 (lower is better)
Translates to: DPSILVFIVHSSVIVLALANQDC*SVRNHH
Trigger: GTGATGGTTCCGAACACTGCAGCAGTCCTGATTTGC...CAAAGCCAGAACAATAACTGAAGAATGTACAATAAAAACTAGAATGCTGGGGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR GCA 90 bp AGCATATATTGTAGATTTTCAACAGGGTTGTGTAGGAACTGTCAAGTAAGAAACATGATGCCTCCCGTCTaGTCCTGTAGGAGGGCATAT +
Preference number: 4 (lower is better)
Translates to: SIYCRFSTGLCRNCQVRNMMPPV*SCRRAY
Trigger: ATATGCCCTCCTACAGGAGCAGACGGGAGGCATCAT...GTTTCTTACTTGACAGTTCCTACACAACCCTGTTGAAAATCTACAATATATGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265272.9
ENST00000333010.6
ENST00000507386.5
ENST00000616793.5
CDS-3UTR GCA 90 bp ATCCACTCTTTAGTAAGTTCGTGGGATCTTGATTGTGGGCAAAATTGGGCTCAACCCAAGATATCAAGCTaGTTTATGAGATCAGGGATG +
Preference number: 4 (lower is better)
Translates to: IHSLVSSWDLDCGQNWAQPKISS*FMRSGM
Trigger: CATCCCTGATCTCATAAAGCAGCTTGATATCTTGGG...TTGAGCCCAATTTTGCCCACAATCAAGATCCCACGAACTTACTAAAGAGTGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616793.5
CDS-3UTR GCA 90 bp GACCCCAGCATTCTAGTTTTTATTGTACATTCTTCAGTTATTGTTCTGGCTTTGTCAGCTCCTTCAATCTaGTGGATCCACTTCTCTGCC +
Preference number: 4 (lower is better)
Translates to: DPSILVFIVHSSVIVLALSAPSI*WIHFSA
Trigger: GGCAGAGAAGTGGATCCAGCAGATTGAAGGAGCTGA...CAAAGCCAGAACAATAACTGAAGAATGTACAATAAAAACTAGAATGCTGGGGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR GCA 90 bp AGGTGTGTGTTGGAGCAGACGGAATATAGATTTACTCATATGGGCCCTGCAACACTGGATTCTCATATATaGTTGGTCAAGAGCTTGTTT +
Preference number: 4 (lower is better)
Translates to: RCVLEQTEYRFTHMGPATLDSHI*LVKSLF
Trigger: AAACAAGCTCTTGACCAAGCATATATGAGAATCCAG...TGTTGCAGGGCCCATATGAGTAAATCTATATTCCGTCTGCTCCAACACACACCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR GCA 90 bp GTAAAAGTGGGGTTCTGTATGATGGCATGCATATGCAATCAAGAGAGCTGGGAGAGGAAGCATCGAATCTaGTTTTATTTCACATGTCAC +
Preference number: 4 (lower is better)
Translates to: VKVGFCMMACICNQESWERKHRI*FYFTCH
Trigger: GTGACATGTGAAATAAAAGCAGATTCGATGCTTCCT...CTCCCAGCTCTCTTGATTGCATATGCATGCCATCATACAGAACCCCACTTTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR GCA 90 bp TTAATGACTGGCTCTCCTGTGGTAAAAGTGGGGTTCTGTATGATGGCATGCATATACACATATTCTCTATaGATGGGAATTCTAGCCCCA +
Preference number: 4 (lower is better)
Translates to: LMTGSPVVKVGFCMMACIYTYSL*MGILAP
Trigger: TGGGGCTAGAATTCCCATGCATAGAGAATATGTGTA...TATGCATGCCATCATACAGAACCCCACTTTTACCACAGGAGAGCCAGTCATTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR GCA 90 bp GTCTTCCTGGGATCTTATCCATGTTTTCGGTTACTCTTTAAGAGGCACCTTGACTACACATATTCTCTATaGATGGGAATTCTAGCCCCA +
Preference number: 4 (lower is better)
Translates to: VFLGSYPCFRLLFKRHLDYTYSL*MGILAP
Trigger: TGGGGCTAGAATTCCCATGCATAGAGAATATGTGTA...GTCAAGGTGCCTCTTAAAGAGTAACCGAAAACATGGATAAGATCCCAGGAAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507386.5
ENST00000616793.5
CDS-3UTR GCA 90 bp GTAAAAGTGGGGTTCTGTATGATGGCATGCATATGCAATCAAGAGAGCTGGGAGGTGATACTGTCAGTTTaGTCCAAGCCTTTGTTTAAT +
Preference number: 4 (lower is better)
Translates to: VKVGFCMMACICNQESWEVILSV*SKPLFN
Trigger: ATTAAACAAAGGCTTGGAGCAAACTGACAGTATCAC...CTCCCAGCTCTCTTGATTGCATATGCATGCCATCATACAGAACCCCACTTTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR GCA 90 bp CAAACTTTATTTCTCCTATTACTAGTGGAGAACACATTTGCTCTCTACCTAAGTCATGAGCCGAGATTGTaGCAATGCACTCCAGCATGG +
Preference number: 4 (lower is better)
Translates to: QTLFLLLLVENTFALYLSHEPRL*QCTPAW
Trigger: CCATGCTGGAGTGCATTGGCACAATCTCGGCTCATG...ACTTAGGTAGAGAGCAAATGTGTTCTCCACTAGTAATAGGAGAAATAAAGTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616793.5
CDS-3UTR GCA 90 bp AAGGAAGCATCGAATCTGCTTTTATTTCACATGTCACATTCGCTCGGGTCCTTTGTTTGGATTTTGATCTaGCTCATTGTGGGAAGTTGC +
Preference number: 4 (lower is better)
Translates to: KEASNLLLFHMSHSLGSFVWILI*LIVGSC
Trigger: GCAACTTCCCACAATGAGGCAGATCAAAATCCAAAC...AAAGGACCCGAGCGAATGTGACATGTGAAATAAAAGCAGATTCGATGCTTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616793.5
CDS-3UTR GCA 90 bp TTAATGACTGGCTCTCCTGTGGTAAAAGTGGGGTTCTGTATGATGGCATGCATATTGAAGGCTAAAACATaGATGAACCCTGTTGAGATG +
Preference number: 4 (lower is better)
Translates to: LMTGSPVVKVGFCMMACILKAKT*MNPVEM
Trigger: CATCTCAACAGGGTTCATGCATGTTTTAGCCTTCAA...TATGCATGCCATCATACAGAACCCCACTTTTACCACAGGAGAGCCAGTCATTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000616793.5
CDS-3UTR CCA 90 bp AATTTTGCCATCTTTGAAGGTTTAGAAGCACTTGTCTTCCTGGGATCTTATCCATTTTCCCTCTGTCTCTaGTTGGCGATGGTGCGAATA +
Preference number: 4 (lower is better)
Translates to: NFAIFEGLEALVFLGSYPFSLCL*LAMVRI
Trigger: TATTCGCACCATCGCCAACCAGAGACAGAGGGAAAA...TGGATAAGATCCCAGGAAGACAAGTGCTTCTAAACCTTCAAAGATGGCAAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333010.6
ENST00000616793.5
CDS-3UTR CCA 90 bp AATTTTGCCATCTTTGAAGGTTTAGAAGCACTTGTCTTCCTGGGATCTTATCCAATCACCTGCCCTTCCTaGAATTTCTCGTTTTGGGCT +
Preference number: 4 (lower is better)
Translates to: NFAIFEGLEALVFLGSYPITCPS*NFSFWA
Trigger: AGCCCAAAACGAGAAATTCCAGGAAGGGCAGGTGAT...TGGATAAGATCCCAGGAAGACAAGTGCTTCTAAACCTTCAAAGATGGCAAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333010.6
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CCA 90 bp GTCTTCCTGGGATCTTATCCATGTTTTCGGTTACTCTTTAAGAGGCACCTTGACTGTTCTTCATTAGCTTaGTCGAGGTCATTCAGAGAT +
Preference number: 4 (lower is better)
Translates to: VFLGSYPCFRLLFKRHLDCSSLA*SRSFRD
Trigger: ATCTCTGAATGACCTCGACCAAGCTAATGAAGAACA...GTCAAGGTGCCTCTTAAAGAGTAACCGAAAACATGGATAAGATCCCAGGAAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333010.6
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CCA 90 bp TTAATGACTGGCTCTCCTGTGGTAAAAGTGGGGTTCTGTATGATGGCATGCATAATCATCAGGAGTAGCTaGTGTTCTGTCTGTTCTAAA +
Preference number: 4 (lower is better)
Translates to: LMTGSPVVKVGFCMMACIIIRSS*CSVCSK
Trigger: TTTAGAACAGACAGAACACCAGCTACTCCTGATGAT...TATGCATGCCATCATACAGAACCCCACTTTTACCACAGGAGAGCCAGTCATTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CCA 90 bp GTCTTCCTGGGATCTTATCCATGTTTTCGGTTACTCTTTAAGAGGCACCTTGACATCATCAGGAGTAGCTaGTGTTCTGTCTGTTCTAAA +
Preference number: 4 (lower is better)
Translates to: VFLGSYPCFRLLFKRHLDIIRSS*CSVCSK
Trigger: TTTAGAACAGACAGAACACCAGCTACTCCTGATGAT...GTCAAGGTGCCTCTTAAAGAGTAACCGAAAACATGGATAAGATCCCAGGAAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333010.6
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CCA 90 bp AGCATATATTGTAGATTTTCAACAGGGTTGTGTAGGAACTGTCAAGTAAGAAACGCTGTTCTTGAGCCTTaGCTTCTCGTTCAGCGTCGA +
Preference number: 4 (lower is better)
Translates to: SIYCRFSTGLCRNCQVRNAVLEP*LLVQRR
Trigger: TCGACGCTGAACGAGAAGCCAAGGCTCAAGAACAGC...GTTTCTTACTTGACAGTTCCTACACAACCCTGTTGAAAATCTACAATATATGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265272.9
ENST00000333010.6
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CCA 90 bp CAAACTTTATTTCTCCTATTACTAGTGGAGAACACATTTGCTCTCTACCTAAGTGCTGTTCTTGAGCCTTaGCTTCTCGTTCAGCGTCGA +
Preference number: 4 (lower is better)
Translates to: QTLFLLLLVENTFALYLSAVLEP*LLVQRR
Trigger: TCGACGCTGAACGAGAAGCCAAGGCTCAAGAACAGC...ACTTAGGTAGAGAGCAAATGTGTTCTCCACTAGTAATAGGAGAAATAAAGTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616793.5
CDS-3UTR CCA 90 bp TTCAGGAACATACATTTGCTCTCAGAGATGACTCCAAGACTCAGTAATACACAAGCTCATTCTGGTCTCTaGCGTCCTGTAGTTCTTGTT +
Preference number: 4 (lower is better)
Translates to: FRNIHLLSEMTPRLSNTQAHSGL*RPVVLV
Trigger: AACAAGAACTACAGGACGCCAGAGACCAGAATGAGC...TTGTGTATTACTGAGTCTTGGAGTCATCTCTGAGAGCAAATGTATGTTCCTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CCA 90 bp GTCTTCCTGGGATCTTATCCATGTTTTCGGTTACTCTTTAAGAGGCACCTTGACAATTTGGAGATTAAATaGAGGGGATCGTCTCTCTCT +
Preference number: 4 (lower is better)
Translates to: VFLGSYPCFRLLFKRHLDNLEIK*RGSSLS
Trigger: AGAGAGAGACGATCCCCTCCATTTAATCTCCAAATT...GTCAAGGTGCCTCTTAAAGAGTAACCGAAAACATGGATAAGATCCCAGGAAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333010.6
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CCA 90 bp AGCATATATTGTAGATTTTCAACAGGGTTGTGTAGGAACTGTCAAGTAAGAAACGCTCCTTCAATCTGCTaGATCCACTTCTCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: SIYCRFSTGLCRNCQVRNAPSIC*IHFSAR
Trigger: CCTGGCAGAGAAGTGGATCCAGCAGATTGAAGGAGC...GTTTCTTACTTGACAGTTCCTACACAACCCTGTTGAAAATCTACAATATATGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265272.9
ENST00000333010.6
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CCA 90 bp TTAATGACTGGCTCTCCTGTGGTAAAAGTGGGGTTCTGTATGATGGCATGCATAGTAGCTTCTAGTTCCTaGATTCTCATATATGCTTGG +
Preference number: 4 (lower is better)
Translates to: LMTGSPVVKVGFCMMACIVASSS*ILIYAW
Trigger: CCAAGCATATATGAGAATCCAGGAACTAGAAGCTAC...TATGCATGCCATCATACAGAACCCCACTTTTACCACAGGAGAGCCAGTCATTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CCA 90 bp ATGAATGAGATCAGTCCATTGTTGATAGAGGAATGCAGATGTGAGAGTAGGACATTCAGAGATGCTCTCTaGCCCATGTTCCCTATAGAT +
Preference number: 4 (lower is better)
Translates to: MNEISPLLIEECRCESRTFRDAL*PMFPID
Trigger: ATCTATAGGGAACATGGGCCAGAGAGCATCTCTGAA...TGTCCTACTCTCACATCTGCATTCCTCTATCAACAATGGACTGATCTCATTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CCA 90 bp ATCCACTCTTTAGTAAGTTCGTGGGATCTTGATTGTGGGCAAAATTGGGCTCAAATATTCACATCTCTGTaGCAAACCCGACTCTTGGTA +
Preference number: 4 (lower is better)
Translates to: IHSLVSSWDLDCGQNWAQIFTSL*QTRLLV
Trigger: TACCAAGAGTCGGGTTTGCCACAGAGATGTGAATAT...TTGAGCCCAATTTTGCCCACAATCAAGATCCCACGAACTTACTAAAGAGTGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616793.5
CDS-3UTR CCA 90 bp AGGTGTGTGTTGGAGCAGACGGAATATAGATTTACTCATATGGGCCCTGCAACAGACTTACAAATTTCTTaGTGGGTGGGAAAGCAAAAT +
Preference number: 4 (lower is better)
Translates to: RCVLEQTEYRFTHMGPATDLQIS*WVGKQN
Trigger: ATTTTGCTTTCCCACCCACCAAGAAATTTGTAAGTC...TGTTGCAGGGCCCATATGAGTAAATCTATATTCCGTCTGCTCCAACACACACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CCA 90 bp TTAATGACTGGCTCTCCTGTGGTAAAAGTGGGGTTCTGTATGATGGCATGCATAATTAAGCATTGGACTTaGACTCCCAGCAAGAGATTT +
Preference number: 4 (lower is better)
Translates to: LMTGSPVVKVGFCMMACIIKHWT*TPSKRF
Trigger: AAATCTCTTGCTGGGAGTCCAAGTCCAATGCTTAAT...TATGCATGCCATCATACAGAACCCCACTTTTACCACAGGAGAGCCAGTCATTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616793.5
CDS-3UTR CCA 90 bp ACTGGCTCTCCTGTGGTAAAAGTGGGGTTCTGTATGATGGCATGCATATGCAATGGGATCTGTTTTAGTTaGAAAATTGCATCATCCACT +
Preference number: 4 (lower is better)
Translates to: TGSPVVKVGFCMMACICNGICFS*KIASST
Trigger: AGTGGATGATGCAATTTTCCAACTAAAACAGATCCC...ATTGCATATGCATGCCATCATACAGAACCCCACTTTTACCACAGGAGAGCCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000616793.5
3UTR CAA 72 bp ATTGAAAAACCGAGTGGTCTCTGCCTCAGTCAACAATaGGAAATAATAGTAGTGAACAGAAGGTGGGGTAAG +
Preference number: 4 (lower is better)
Translates to: IEKPSGLCLSQQ*EIIVVNRRWGK
Trigger: CTTACCCCACCTTCTGTTCACTACTATTATTTCCAATTGTTGACTGAGGCAGAGACCACTCGGTTTTTCAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616793.5
CDS-3UTR TCA 90 bp AATTTTGCCATCTTTGAAGGTTTAGAAGCACTTGTCTTCCTGGGATCTTATCCAGGGAGAGATGCAAACTaGATCCATTTTCCTTGTGAC +
Preference number: 4 (lower is better)
Translates to: NFAIFEGLEALVFLGSYPGRDAN*IHFPCD
Trigger: GTCACAAGGAAAATGGATTCAGTTTGCATCTCTCCC...TGGATAAGATCCCAGGAAGACAAGTGCTTCTAAACCTTCAAAGATGGCAAAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333010.6
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp TTAAGTGACTGGGCCAAAGATACCTGGGTCAGCAGTAAATGTAAGAACAAAAAGCTCTCTTTCAAGCTTTaGTACCTTGGACTTCTCTTG +
Preference number: 4 (lower is better)
Translates to: LSDWAKDTWVSSKCKNKKLSFKL*YLGLLL
Trigger: CAAGAGAAGTCCAAGGTATCAAAGCTTGAAAGAGAG...CTTTTTGTTCTTACATTTACTGCTGACCCAGGTATCTTTGGCCCAGTCACTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp AGCATATATTGTAGATTTTCAACAGGGTTGTGTAGGAACTGTCAAGTAAGAAACTCCTGTCCTTGGCTTTaGTTTCATCCATCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: SIYCRFSTGLCRNCQVRNSCPWL*FHPSAS
Trigger: GGAGGCTGATGGATGAAATCAAAGCCAAGGACAGGA...GTTTCTTACTTGACAGTTCCTACACAACCCTGTTGAAAATCTACAATATATGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265272.9
ENST00000333010.6
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp GTCTTCCTGGGATCTTATCCATGTTTTCGGTTACTCTTTAAGAGGCACCTTGACTCAGCTATTCTCTTTTaGTTTCTTCGCAAATCAGGA +
Preference number: 4 (lower is better)
Translates to: VFLGSYPCFRLLFKRHLDSAILF*FLRKSG
Trigger: TCCTGATTTGCGAAGAAATCAAAAGAGAATAGCTGA...GTCAAGGTGCCTCTTAAAGAGTAACCGAAAACATGGATAAGATCCCAGGAAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333010.6
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp AGCATATATTGTAGATTTTCAACAGGGTTGTGTAGGAACTGTCAAGTAAGAAACGCTTTCTTCTACGGATaGGCTTTTCTCGGTCCCTTG +
Preference number: 4 (lower is better)
Translates to: SIYCRFSTGLCRNCQVRNAFFYG*AFLGPL
Trigger: CAAGGGACCGAGAAAAGCTCATCCGTAGAAGAAAGC...GTTTCTTACTTGACAGTTCCTACACAACCCTGTTGAAAATCTACAATATATGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265272.9
ENST00000333010.6
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp TGCTTTTATTTCACATGTCACATTCGCTCGGGTCCTTTGACTTCGTTACCAGTTGCTCTTTGGAGGGCCTaGTATTCTTTTGTTAATTGT +
Preference number: 4 (lower is better)
Translates to: CFYFTCHIRSGPLTSLPVALWRA*YSFVNC
Trigger: ACAATTAACAAAAGAATATCAGGCCCTCCAAAGAGC...AACTGGTAACGAAGTCAAAGGACCCGAGCGAATGTGACATGTGAAATAAAAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp TTAAGTGACTGGGCCAAAGATACCTGGGTCAGCAGTAAATGTAAGAACAAAAAGTCTTGTTGTAACCGGTaGTTTTCTGCCTCCTGTTTT +
Preference number: 4 (lower is better)
Translates to: LSDWAKDTWVSSKCKNKKSCCNR*FSASCF
Trigger: AAAACAGGAGGCAGAAAATCACCGGTTACAACAAGA...CTTTTTGTTCTTACATTTACTGCTGACCCAGGTATCTTTGGCCCAGTCACTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp ATCCACTCTTTAGTAAGTTCGTGGGATCTTGATTGTGGGCAAAATTGGGCTCAACCATCTGAGAATGGGTaGATTTGGAGATTAAATGGA +
Preference number: 4 (lower is better)
Translates to: IHSLVSSWDLDCGQNWAQPSENG*IWRLNG
Trigger: TCCATTTAATCTCCAAATTCACCCATTCTCAGATGG...TTGAGCCCAATTTTGCCCACAATCAAGATCCCACGAACTTACTAAAGAGTGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616793.5
CDS-3UTR TCA 90 bp AAGGAAGCATCGAATCTGCTTTTATTTCACATGTCACATTCGCTCGGGTCCTTTTATCAAGCTGCTTTATaGGATCAGGGATGTTCACAT +
Preference number: 4 (lower is better)
Translates to: KEASNLLLFHMSHSLGSFYQAAL*DQGCSH
Trigger: ATGTGAACATCCCTGATCTCATAAAGCAGCTTGATA...AAAGGACCCGAGCGAATGTGACATGTGAAATAAAAGCAGATTCGATGCTTCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp TGCTTTTATTTCACATGTCACATTCGCTCGGGTCCTTTGACTTCGTTACCAGTTTATCAAGCTGCTTTATaGGATCAGGGATGTTCACAT +
Preference number: 4 (lower is better)
Translates to: CFYFTCHIRSGPLTSLPVYQAAL*DQGCSH
Trigger: ATGTGAACATCCCTGATCTCATAAAGCAGCTTGATA...AACTGGTAACGAAGTCAAAGGACCCGAGCGAATGTGACATGTGAAATAAAAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp AAGGAAGCATCGAATCTGCTTTTATTTCACATGTCACATTCGCTCGGGTCCTTTATTTGCTCTCAGAGATaGCTCCAAGACTCAGTAATA +
Preference number: 4 (lower is better)
Translates to: KEASNLLLFHMSHSLGSFICSQR*LQDSVI
Trigger: TATTACTGAGTCTTGGAGTCATCTCTGAGAGCAAAT...AAAGGACCCGAGCGAATGTGACATGTGAAATAAAAGCAGATTCGATGCTTCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp AATTTTGCCATCTTTGAAGGTTTAGAAGCACTTGTCTTCCTGGGATCTTATCCAAAGTGGGGTTCTGTATaGTGGCATGCATATGCAATC +
Preference number: 4 (lower is better)
Translates to: NFAIFEGLEALVFLGSYPKWGSV*WHAYAI
Trigger: GATTGCATATGCATGCCATCATACAGAACCCCACTT...TGGATAAGATCCCAGGAAGACAAGTGCTTCTAAACCTTCAAAGATGGCAAAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp AAGGAAGCATCGAATCTGCTTTTATTTCACATGTCACATTCGCTCGGGTCCTTTCTCTTCCATATTTTCTaGCTCAAGTTGGCTAGTGTT +
Preference number: 4 (lower is better)
Translates to: KEASNLLLFHMSHSLGSFLFHIF*LKLASV
Trigger: AACACTAGCCAACTTGAGTCAGAAAATATGGAAGAG...AAAGGACCCGAGCGAATGTGACATGTGAAATAAAAGCAGATTCGATGCTTCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp AGCATATATTGTAGATTTTCAACAGGGTTGTGTAGGAACTGTCAAGTAAGAAACCTCTCTTTCAAGCTTTaGTACCATGCTGAGACCCGG +
Preference number: 4 (lower is better)
Translates to: SIYCRFSTGLCRNCQVRNLSFKL*YHAETR
Trigger: CCGGGTCTCAGCATGGTATCAAAGCTTGAAAGAGAG...GTTTCTTACTTGACAGTTCCTACACAACCCTGTTGAAAATCTACAATATATGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333010.6
CDS-3UTR TCA 90 bp ATCCACTCTTTAGTAAGTTCGTGGGATCTTGATTGTGGGCAAAATTGGGCTCAATGCCCTGCCCCATTCTaGAATGGAATAATAGAATTT +
Preference number: 4 (lower is better)
Translates to: IHSLVSSWDLDCGQNWAQCPAPF*NGIIEF
Trigger: AAATTCTATTATTCCATTTCAGAATGGGGCAGGGCA...TTGAGCCCAATTTTGCCCACAATCAAGATCCCACGAACTTACTAAAGAGTGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616793.5
CDS-3UTR GCA 90 bp AGCATATATTGTAGATTTTCAACAGGGTTGTGTAGGAACTGTCAAGTAAGAAACGCATCTACTGTGTGGTaGTCCTTGGTAAGGTCTCCT +
Preference number: 4 (lower is better)
Translates to: SIYCRFSTGLCRNCQVRNASTVW*SLVRSP
Trigger: AGGAGACCTTACCAAGGAGCACCACACAGTAGATGC...GTTTCTTACTTGACAGTTCCTACACAACCCTGTTGAAAATCTACAATATATGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR GCA 90 bp CAAACTTTATTTCTCCTATTACTAGTGGAGAACACATTTGCTCTCTACCTAAGTGCATCTACTGTGTGGTaGTCCTTGGTAAGGTCTCCT +
Preference number: 4 (lower is better)
Translates to: QTLFLLLLVENTFALYLSASTVW*SLVRSP
Trigger: AGGAGACCTTACCAAGGAGCACCACACAGTAGATGC...ACTTAGGTAGAGAGCAAATGTGTTCTCCACTAGTAATAGGAGAAATAAAGTTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616793.5
CDS-3UTR GCA 90 bp GTCTTCCTGGGATCTTATCCATGTTTTCGGTTACTCTTTAAGAGGCACCTTGACAGCCTTGATTTTATCTaGTTGGATCATATTGCTCAG +
Preference number: 4 (lower is better)
Translates to: VFLGSYPCFRLLFKRHLDSLDFI*LDHIAQ
Trigger: CTGAGCAATATGATCCAAGCAGATAAAATCAAGGCT...GTCAAGGTGCCTCTTAAAGAGTAACCGAAAACATGGATAAGATCCCAGGAAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333010.6
ENST00000507386.5
ENST00000616793.5
CDS-3UTR GCA 90 bp AGCATATATTGTAGATTTTCAACAGGGTTGTGTAGGAACTGTCAAGTAAGAAACGCAAATCAGGACTGCTaGAGTGTTCGGAACCATCAC +
Preference number: 4 (lower is better)
Translates to: SIYCRFSTGLCRNCQVRNANQDC*SVRNHH
Trigger: GTGATGGTTCCGAACACTGCAGCAGTCCTGATTTGC...GTTTCTTACTTGACAGTTCCTACACAACCCTGTTGAAAATCTACAATATATGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265272.9
ENST00000333010.6
ENST00000507386.5
ENST00000616793.5
CDS-3UTR GCA 90 bp AATTTTGCCATCTTTGAAGGTTTAGAAGCACTTGTCTTCCTGGGATCTTATCCAAGGAGAGGTTTACATTaGTTTTCGGTTTCCCGCACA +
Preference number: 4 (lower is better)
Translates to: NFAIFEGLEALVFLGSYPRRGLH*FSVSRT
Trigger: TGTGCGGGAAACCGAAAAGCAATGTAAACCTCTCCT...TGGATAAGATCCCAGGAAGACAAGTGCTTCTAAACCTTCAAAGATGGCAAAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333010.6
ENST00000507386.5
ENST00000616793.5
CDS-3UTR GCA 90 bp AATTTTGCCATCTTTGAAGGTTTAGAAGCACTTGTCTTCCTGGGATCTTATCCATTTTCTTCCATGCGCTaGAAGGACACCATCAGTTCA +
Preference number: 4 (lower is better)
Translates to: NFAIFEGLEALVFLGSYPFSSMR*KDTISS
Trigger: TGAACTGATGGTGTCCTTGCAGCGCATGGAAGAAAA...TGGATAAGATCCCAGGAAGACAAGTGCTTCTAAACCTTCAAAGATGGCAAAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333010.6
ENST00000507386.5
ENST00000616793.5
CDS-3UTR GCA 90 bp GTCTTCCTGGGATCTTATCCATGTTTTCGGTTACTCTTTAAGAGGCACCTTGACCTGGATTCTCATATATaGTTGGTCAAGAGCTTGTTT +
Preference number: 4 (lower is better)
Translates to: VFLGSYPCFRLLFKRHLDLDSHI*LVKSLF
Trigger: AAACAAGCTCTTGACCAAGCATATATGAGAATCCAG...GTCAAGGTGCCTCTTAAAGAGTAACCGAAAACATGGATAAGATCCCAGGAAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333010.6
ENST00000507386.5
ENST00000616793.5
CDS-3UTR GCA 90 bp ATGAATGAGATCAGTCCATTGTTGATAGAGGAATGCAGATGTGAGAGTAGGACAGTAGAGCTATCTTGTTaGTGTCATCTGTCTGGGAAA +
Preference number: 4 (lower is better)
Translates to: MNEISPLLIEECRCESRTVELSC*CHLSGK
Trigger: TTTCCCAGACAGATGACAGCAACAAGATAGCTCTAC...TGTCCTACTCTCACATCTGCATTCCTCTATCAACAATGGACTGATCTCATTCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR GCA 90 bp TTAATGACTGGCTCTCCTGTGGTAAAAGTGGGGTTCTGTATGATGGCATGCATATTACAAAGCACATTGTaGTACTTTAAGCACCTCTTG +
Preference number: 4 (lower is better)
Translates to: LMTGSPVVKVGFCMMACILQSTL*YFKHLL
Trigger: CAAGAGGTGCTTAAAGTAGCACAATGTGCTTTGTAA...TATGCATGCCATCATACAGAACCCCACTTTTACCACAGGAGAGCCAGTCATTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR GCA 90 bp TGCTTTTATTTCACATGTCACATTCGCTCGGGTCCTTTGACTTCGTTACCAGTTTTCTGTATGATGGCATaGATATGCAATCAAGAGAGC +
Preference number: 4 (lower is better)
Translates to: CFYFTCHIRSGPLTSLPVFCMMA*ICNQES
Trigger: GCTCTCTTGATTGCATATGCATGCCATCATACAGAA...AACTGGTAACGAAGTCAAAGGACCCGAGCGAATGTGACATGTGAAATAAAAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CCA 90 bp GACCCCAGCATTCTAGTTTTTATTGTACATTCTTCAGTTATTGTTCTGGCTTTGTTTTCCCTCTGTCTCTaGTTGGCGATGGTGCGAATA +
Preference number: 4 (lower is better)
Translates to: DPSILVFIVHSSVIVLALFSLCL*LAMVRI
Trigger: TATTCGCACCATCGCCAACCAGAGACAGAGGGAAAA...CAAAGCCAGAACAATAACTGAAGAATGTACAATAAAAACTAGAATGCTGGGGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265272.9
ENST00000616793.5
CDS-3UTR CCA 90 bp AAGGAAGCATCGAATCTGCTTTTATTTCACATGTCACATTCGCTCGGGTCCTTTTACTGTTTCTTATCCTaGAGTACGATGTCTCAGCAT +
Preference number: 4 (lower is better)
Translates to: KEASNLLLFHMSHSLGSFYCFLS*STMSQH
Trigger: ATGCTGAGACATCGTACTCCAGGATAAGAAACAGTA...AAAGGACCCGAGCGAATGTGACATGTGAAATAAAAGCAGATTCGATGCTTCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CCA 90 bp ATGAATGAGATCAGTCCATTGTTGATAGAGGAATGCAGATGTGAGAGTAGGACACAAGCTTTGATACCTTaGACTTCTCTTGATGCAGCT +
Preference number: 4 (lower is better)
Translates to: MNEISPLLIEECRCESRTQALIP*TSLDAA
Trigger: AGCTGCATCAAGAGAAGTCCAAGGTATCAAAGCTTG...TGTCCTACTCTCACATCTGCATTCCTCTATCAACAATGGACTGATCTCATTCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CCA 90 bp AATTTTGCCATCTTTGAAGGTTTAGAAGCACTTGTCTTCCTGGGATCTTATCCATGGAATTTCTCGTTTTaGGCTGCTCATGTTGCACTC +
Preference number: 4 (lower is better)
Translates to: NFAIFEGLEALVFLGSYPWNFSF*AAHVAL
Trigger: GAGTGCAACATGAGCAGCCCAAAACGAGAAATTCCA...TGGATAAGATCCCAGGAAGACAAGTGCTTCTAAACCTTCAAAGATGGCAAAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333010.6
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CCA 90 bp AATTTTGCCATCTTTGAAGGTTTAGAAGCACTTGTCTTCCTGGGATCTTATCCAAATTCCATCATTTTCTaGTGTAGGGCAGCCTCAGCT +
Preference number: 4 (lower is better)
Translates to: NFAIFEGLEALVFLGSYPNSIIF*CRAASA
Trigger: AGCTGAGGCTGCCCTACACCAGAAAATGATGGAATT...TGGATAAGATCCCAGGAAGACAAGTGCTTCTAAACCTTCAAAGATGGCAAAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333010.6
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CCA 90 bp TGCTTTTATTTCACATGTCACATTCGCTCGGGTCCTTTGACTTCGTTACCAGTTGTAGCTTCTAGTTCCTaGATTCTCATATATGCTTGG +
Preference number: 4 (lower is better)
Translates to: CFYFTCHIRSGPLTSLPVVASSS*ILIYAW
Trigger: CCAAGCATATATGAGAATCCAGGAACTAGAAGCTAC...AACTGGTAACGAAGTCAAAGGACCCGAGCGAATGTGACATGTGAAATAAAAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CCA 90 bp GAGGCTCATGAGCAAGAGTTGGTAAAAATTACAGTTCAGTCTATAGTCTTGAGACTCATCTGTCGTCTGTaGAATGAATTCCACAAGCTC +
Preference number: 4 (lower is better)
Translates to: EAHEQELVKITVQSIVLRLICRL*NEFHKL
Trigger: GAGCTTGTGGAATTCATTCCACAGACGACAGATGAG...TCTCAAGACTATAGACTGAACTGTAATTTTTACCAACTCTTGCTCATGAGCCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CCA 90 bp TTCAGGAACATACATTTGCTCTCAGAGATGACTCCAAGACTCAGTAATACACAACTCATCTGTCGTCTGTaGAATGAATTCCACAAGCTC +
Preference number: 4 (lower is better)
Translates to: FRNIHLLSEMTPRLSNTQLICRL*NEFHKL
Trigger: GAGCTTGTGGAATTCATTCCACAGACGACAGATGAG...TTGTGTATTACTGAGTCTTGGAGTCATCTCTGAGAGCAAATGTATGTTCCTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CCA 90 bp AATTTTGCCATCTTTGAAGGTTTAGAAGCACTTGTCTTCCTGGGATCTTATCCACTCATCTGTCGTCTGTaGAATGAATTCCACAAGCTC +
Preference number: 4 (lower is better)
Translates to: NFAIFEGLEALVFLGSYPLICRL*NEFHKL
Trigger: GAGCTTGTGGAATTCATTCCACAGACGACAGATGAG...TGGATAAGATCCCAGGAAGACAAGTGCTTCTAAACCTTCAAAGATGGCAAAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CCA 90 bp ATGAATGAGATCAGTCCATTGTTGATAGAGGAATGCAGATGTGAGAGTAGGACAATATTCACATCTCTGTaGCAAACCCGACTCTTGGTA +
Preference number: 4 (lower is better)
Translates to: MNEISPLLIEECRCESRTIFTSL*QTRLLV
Trigger: TACCAAGAGTCGGGTTTGCCACAGAGATGTGAATAT...TGTCCTACTCTCACATCTGCATTCCTCTATCAACAATGGACTGATCTCATTCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CCA 90 bp AAGGAAGCATCGAATCTGCTTTTATTTCACATGTCACATTCGCTCGGGTCCTTTCATAGAAAGAGTTTCTaGCTCCCTACACATATTCTC +
Preference number: 4 (lower is better)
Translates to: KEASNLLLFHMSHSLGSFHRKSF*LPTHIL
Trigger: GAGAATATGTGTAGGGAGCCAGAAACTCTTTCTATG...AAAGGACCCGAGCGAATGTGACATGTGAAATAAAAGCAGATTCGATGCTTCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CCA 90 bp TGCTTTTATTTCACATGTCACATTCGCTCGGGTCCTTTGACTTCGTTACCAGTTTGCAATCAAGAGAGCTaGGAGATGCTTATCATAGAA +
Preference number: 4 (lower is better)
Translates to: CFYFTCHIRSGPLTSLPVCNQES*EMLIIE
Trigger: TTCTATGATAAGCATCTCCCAGCTCTCTTGATTGCA...AACTGGTAACGAAGTCAAAGGACCCGAGCGAATGTGACATGTGAAATAAAAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CCA 90 bp AAGGAAGCATCGAATCTGCTTTTATTTCACATGTCACATTCGCTCGGGTCCTTTCCTTTGTTTAATGACTaGCTCTCCTGTGGTAAAAGT +
Preference number: 4 (lower is better)
Translates to: KEASNLLLFHMSHSLGSFPLFND*LSCGKS
Trigger: ACTTTTACCACAGGAGAGCCAGTCATTAAACAAAGG...AAAGGACCCGAGCGAATGTGACATGTGAAATAAAAGCAGATTCGATGCTTCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CCA 90 bp TGCTTTTATTTCACATGTCACATTCGCTCGGGTCCTTTGACTTCGTTACCAGTTATAGATTTACTCATATaGGCCCTGCAACAGAAAGTG +
Preference number: 4 (lower is better)
Translates to: CFYFTCHIRSGPLTSLPVIDLLI*ALQQKV
Trigger: CACTTTCTGTTGCAGGGCCCATATGAGTAAATCTAT...AACTGGTAACGAAGTCAAAGGACCCGAGCGAATGTGACATGTGAAATAAAAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CCA 90 bp TTAAGTGACTGGGCCAAAGATACCTGGGTCAGCAGTAAATGTAAGAACAAAAAGAAGGAAGGTGTGTGTTaGAGCAGACGGAATATAGAT +
Preference number: 4 (lower is better)
Translates to: LSDWAKDTWVSSKCKNKKKEGVC*SRRNID
Trigger: ATCTATATTCCGTCTGCTCCAACACACACCTTCCTT...CTTTTTGTTCTTACATTTACTGCTGACCCAGGTATCTTTGGCCCAGTCACTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CCA 90 bp ATGAATGAGATCAGTCCATTGTTGATAGAGGAATGCAGATGTGAGAGTAGGACAAAGGAAGGTGTGTGTTaGAGCAGACGGAATATAGAT +
Preference number: 4 (lower is better)
Translates to: MNEISPLLIEECRCESRTKEGVC*SRRNID
Trigger: ATCTATATTCCGTCTGCTCCAACACACACCTTCCTT...TGTCCTACTCTCACATCTGCATTCCTCTATCAACAATGGACTGATCTCATTCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CCA 90 bp TTAATGACTGGCTCTCCTGTGGTAAAAGTGGGGTTCTGTATGATGGCATGCATAGACTTACAAATTTCTTaGTGGGTGGGAAAGCAAAAT +
Preference number: 4 (lower is better)
Translates to: LMTGSPVVKVGFCMMACIDLQIS*WVGKQN
Trigger: ATTTTGCTTTCCCACCCACCAAGAAATTTGTAAGTC...TATGCATGCCATCATACAGAACCCCACTTTTACCACAGGAGAGCCAGTCATTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CCA 90 bp GTCTTCCTGGGATCTTATCCATGTTTTCGGTTACTCTTTAAGAGGCACCTTGACTGCCCCATTCTGAAATaGAATAATAGAATTTGGCAC +
Preference number: 4 (lower is better)
Translates to: VFLGSYPCFRLLFKRHLDCPILK*NNRIWH
Trigger: GTGCCAAATTCTATTATTCCATTTCAGAATGGGGCA...GTCAAGGTGCCTCTTAAAGAGTAACCGAAAACATGGATAAGATCCCAGGAAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616793.5
CDS-3UTR CCA 90 bp TGCTTTTATTTCACATGTCACATTCGCTCGGGTCCTTTGACTTCGTTACCAGTTTCTTTAGTAAGTTCGTaGGATCTTGATTGTGGGCAA +
Preference number: 4 (lower is better)
Translates to: CFYFTCHIRSGPLTSLPVSLVSS*DLDCGQ
Trigger: TTGCCCACAATCAAGATCCCACGAACTTACTAAAGA...AACTGGTAACGAAGTCAAAGGACCCGAGCGAATGTGACATGTGAAATAAAAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616793.5
CDS-3UTR TCA 90 bp GACCCCAGCATTCTAGTTTTTATTGTACATTCTTCAGTTATTGTTCTGGCTTTGGGGAGAGATGCAAACTaGATCCATTTTCCTTGTGAC +
Preference number: 4 (lower is better)
Translates to: DPSILVFIVHSSVIVLALGRDAN*IHFPCD
Trigger: GTCACAAGGAAAATGGATTCAGTTTGCATCTCTCCC...CAAAGCCAGAACAATAACTGAAGAATGTACAATAAAAACTAGAATGCTGGGGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp AAGGAAGCATCGAATCTGCTTTTATTTCACATGTCACATTCGCTCGGGTCCTTTTGTTGCTCAATGACCTaGAGTTTTAGAAACTCTGTT +
Preference number: 4 (lower is better)
Translates to: KEASNLLLFHMSHSLGSFCCSMT*SFRNSV
Trigger: AACAGAGTTTCTAAAACTTCAGGTCATTGAGCAACA...AAAGGACCCGAGCGAATGTGACATGTGAAATAAAAGCAGATTCGATGCTTCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp AATTTTGCCATCTTTGAAGGTTTAGAAGCACTTGTCTTCCTGGGATCTTATCCATCTTGTTGTAACCGGTaGTTTTCTGCCTCCTGTTTT +
Preference number: 4 (lower is better)
Translates to: NFAIFEGLEALVFLGSYPSCCNR*FSASCF
Trigger: AAAACAGGAGGCAGAAAATCACCGGTTACAACAAGA...TGGATAAGATCCCAGGAAGACAAGTGCTTCTAAACCTTCAAAGATGGCAAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333010.6
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp TTAAGTGACTGGGCCAAAGATACCTGGGTCAGCAGTAAATGTAAGAACAAAAAGTATCAAGCTGCTTTATaGGATCAGGGATGTTCACAT +
Preference number: 4 (lower is better)
Translates to: LSDWAKDTWVSSKCKNKKYQAAL*DQGCSH
Trigger: ATGTGAACATCCCTGATCTCATAAAGCAGCTTGATA...CTTTTTGTTCTTACATTTACTGCTGACCCAGGTATCTTTGGCCCAGTCACTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp TTAAGTGACTGGGCCAAAGATACCTGGGTCAGCAGTAAATGTAAGAACAAAAAGATTTGCTCTCAGAGATaGCTCCAAGACTCAGTAATA +
Preference number: 4 (lower is better)
Translates to: LSDWAKDTWVSSKCKNKKICSQR*LQDSVI
Trigger: TATTACTGAGTCTTGGAGTCATCTCTGAGAGCAAAT...CTTTTTGTTCTTACATTTACTGCTGACCCAGGTATCTTTGGCCCAGTCACTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp ATGAATGAGATCAGTCCATTGTTGATAGAGGAATGCAGATGTGAGAGTAGGACAATTTGCTCTCAGAGATaGCTCCAAGACTCAGTAATA +
Preference number: 4 (lower is better)
Translates to: MNEISPLLIEECRCESRTICSQR*LQDSVI
Trigger: TATTACTGAGTCTTGGAGTCATCTCTGAGAGCAAAT...TGTCCTACTCTCACATCTGCATTCCTCTATCAACAATGGACTGATCTCATTCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp TTAAGTGACTGGGCCAAAGATACCTGGGTCAGCAGTAAATGTAAGAACAAAAAGCTCTTCCATATTTTCTaGCTCAAGTTGGCTAGTGTT +
Preference number: 4 (lower is better)
Translates to: LSDWAKDTWVSSKCKNKKLFHIF*LKLASV
Trigger: AACACTAGCCAACTTGAGTCAGAAAATATGGAAGAG...CTTTTTGTTCTTACATTTACTGCTGACCCAGGTATCTTTGGCCCAGTCACTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp TGCTTTTATTTCACATGTCACATTCGCTCGGGTCCTTTGACTTCGTTACCAGTTGGAAGCATAAACTCATaGCATAAACAGTCATCTAAG +
Preference number: 4 (lower is better)
Translates to: CFYFTCHIRSGPLTSLPVGSINS*HKQSSK
Trigger: CTTAGATGACTGTTTATGTCATGAGTTTATGCTTCC...AACTGGTAACGAAGTCAAAGGACCCGAGCGAATGTGACATGTGAAATAAAAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616793.5
CDS-3UTR TCA 90 bp AGCATATATTGTAGATTTTCAACAGGGTTGTGTAGGAACTGTCAAGTAAGAAACAAGTTCGTGGGATCTTaGTTGTGGGCAAAATTGGGC +
Preference number: 4 (lower is better)
Translates to: SIYCRFSTGLCRNCQVRNKFVGS*LWAKLG
Trigger: GCCCAATTTTGCCCACAATCAAGATCCCACGAACTT...GTTTCTTACTTGACAGTTCCTACACAACCCTGTTGAAAATCTACAATATATGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616793.5
CDS-3UTR GCA 90 bp TTAAGTGACTGGGCCAAAGATACCTGGGTCAGCAGTAAATGTAAGAACAAAAAGCTTTCAAGCAGGTGCTaGCATGTTACTGTTTCTTAT +
Preference number: 4 (lower is better)
Translates to: LSDWAKDTWVSSKCKNKKLSSRC*HVTVSY
Trigger: ATAAGAAACAGTAACATGGCAGCACCTGCTTGAAAG...CTTTTTGTTCTTACATTTACTGCTGACCCAGGTATCTTTGGCCCAGTCACTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR GCA 90 bp ATGAATGAGATCAGTCCATTGTTGATAGAGGAATGCAGATGTGAGAGTAGGACACTTTCAAGCAGGTGCTaGCATGTTACTGTTTCTTAT +
Preference number: 4 (lower is better)
Translates to: MNEISPLLIEECRCESRTLSSRC*HVTVSY
Trigger: ATAAGAAACAGTAACATGGCAGCACCTGCTTGAAAG...TGTCCTACTCTCACATCTGCATTCCTCTATCAACAATGGACTGATCTCATTCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR GCA 90 bp TTAAGTGACTGGGCCAAAGATACCTGGGTCAGCAGTAAATGTAAGAACAAAAAGTTTCTTTCAAGCAGGTaGTGCCATGTTACTGTTTCT +
Preference number: 4 (lower is better)
Translates to: LSDWAKDTWVSSKCKNKKFLSSR*CHVTVS
Trigger: AGAAACAGTAACATGGCAGCACCTGCTTGAAAGAAA...CTTTTTGTTCTTACATTTACTGCTGACCCAGGTATCTTTGGCCCAGTCACTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR GCA 90 bp AGCATATATTGTAGATTTTCAACAGGGTTGTGTAGGAACTGTCAAGTAAGAAACGACATTTCCTGCTCGTaGTGCTTGATAAGGTTCTCC +
Preference number: 4 (lower is better)
Translates to: SIYCRFSTGLCRNCQVRNDISCS*CLIRFS
Trigger: GGAGAACCTTATCAAGCAGCACGAGCAGGAAATGTC...GTTTCTTACTTGACAGTTCCTACACAACCCTGTTGAAAATCTACAATATATGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265272.9
ENST00000333010.6
ENST00000507386.5
ENST00000616793.5
CDS-3UTR GCA 90 bp AAGGAAGCATCGAATCTGCTTTTATTTCACATGTCACATTCGCTCGGGTCCTTTAGCCTTGATTTTATCTaGTTGGATCATATTGCTCAG +
Preference number: 4 (lower is better)
Translates to: KEASNLLLFHMSHSLGSFSLDFI*LDHIAQ
Trigger: CTGAGCAATATGATCCAAGCAGATAAAATCAAGGCT...AAAGGACCCGAGCGAATGTGACATGTGAAATAAAAGCAGATTCGATGCTTCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR GCA 90 bp AGCATATATTGTAGATTTTCAACAGGGTTGTGTAGGAACTGTCAAGTAAGAAACTTTCTCGTTTTGGGCTaGTCATGTTGCACTCAGCCT +
Preference number: 4 (lower is better)
Translates to: SIYCRFSTGLCRNCQVRNFLVLG*SCCTQP
Trigger: AGGCTGAGTGCAACATGAGCAGCCCAAAACGAGAAA...GTTTCTTACTTGACAGTTCCTACACAACCCTGTTGAAAATCTACAATATATGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265272.9
ENST00000333010.6
ENST00000507386.5
ENST00000616793.5
CDS-3UTR GCA 90 bp AGCATATATTGTAGATTTTCAACAGGGTTGTGTAGGAACTGTCAAGTAAGAAACTTCGCAAATCAGGACTaGTGCAGTGTTCGGAACCAT +
Preference number: 4 (lower is better)
Translates to: SIYCRFSTGLCRNCQVRNFANQD*CSVRNH
Trigger: ATGGTTCCGAACACTGCAGCAGTCCTGATTTGCGAA...GTTTCTTACTTGACAGTTCCTACACAACCCTGTTGAAAATCTACAATATATGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265272.9
ENST00000333010.6
ENST00000507386.5
ENST00000616793.5
CDS-3UTR GCA 90 bp GACCCCAGCATTCTAGTTTTTATTGTACATTCTTCAGTTATTGTTCTGGCTTTGTTTTCTTCCATGCGCTaGAAGGACACCATCAGTTCA +
Preference number: 4 (lower is better)
Translates to: DPSILVFIVHSSVIVLALFSSMR*KDTISS
Trigger: TGAACTGATGGTGTCCTTGCAGCGCATGGAAGAAAA...CAAAGCCAGAACAATAACTGAAGAATGTACAATAAAAACTAGAATGCTGGGGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR GCA 90 bp AATTTTGCCATCTTTGAAGGTTTAGAAGCACTTGTCTTCCTGGGATCTTATCCATTAGTTTTTCTTCCATaGGCTGCAAGGACACCATCA +
Preference number: 4 (lower is better)
Translates to: NFAIFEGLEALVFLGSYPLVFLP*AARTPS
Trigger: TGATGGTGTCCTTGCAGCGCATGGAAGAAAAACTAA...TGGATAAGATCCCAGGAAGACAAGTGCTTCTAAACCTTCAAAGATGGCAAAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000333010.6
ENST00000507386.5
ENST00000616793.5
CDS-3UTR GCA 90 bp AAGGAAGCATCGAATCTGCTTTTATTTCACATGTCACATTCGCTCGGGTCCTTTCTGGATTCTCATATATaGTTGGTCAAGAGCTTGTTT +
Preference number: 4 (lower is better)
Translates to: KEASNLLLFHMSHSLGSFLDSHI*LVKSLF
Trigger: AAACAAGCTCTTGACCAAGCATATATGAGAATCCAG...AAAGGACCCGAGCGAATGTGACATGTGAAATAAAAGCAGATTCGATGCTTCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR GCA 90 bp AGCATATATTGTAGATTTTCAACAGGGTTGTGTAGGAACTGTCAAGTAAGAAACGACAGTCATACTCTCTaGTCTTCCTCAGCATTTGCC +
Preference number: 4 (lower is better)
Translates to: SIYCRFSTGLCRNCQVRNDSHTL*SSSAFA
Trigger: GGCAAATGCTGAGGAAGAGCAGAGAGTATGACTGTC...GTTTCTTACTTGACAGTTCCTACACAACCCTGTTGAAAATCTACAATATATGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265272.9
ENST00000333010.6
ENST00000507386.5
ENST00000616793.5
CDS-3UTR GCA 90 bp AAGGAAGCATCGAATCTGCTTTTATTTCACATGTCACATTCGCTCGGGTCCTTTAGGAAGCATCGAATCTaGTTTTATTTCACATGTCAC +
Preference number: 4 (lower is better)
Translates to: KEASNLLLFHMSHSLGSFRKHRI*FYFTCH
Trigger: GTGACATGTGAAATAAAAGCAGATTCGATGCTTCCT...AAAGGACCCGAGCGAATGTGACATGTGAAATAAAAGCAGATTCGATGCTTCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR GCA 90 bp GAGGCTCATGAGCAAGAGTTGGTAAAAATTACAGTTCAGTCTATAGTCTTGAGAAAGAAGAGGTCAGAATaGTCTAGGCATGTGAGGATT +
Preference number: 4 (lower is better)
Translates to: EAHEQELVKITVQSIVLRKKRSE*SRHVRI
Trigger: AATCCTCACATGCCTAGAGCATTCTGACCTCTTCTT...TCTCAAGACTATAGACTGAACTGTAATTTTTACCAACTCTTGCTCATGAGCCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR GCA 90 bp TTAAGTGACTGGGCCAAAGATACCTGGGTCAGCAGTAAATGTAAGAACAAAAAGTACACATATTCTCTATaGATGGGAATTCTAGCCCCA +
Preference number: 4 (lower is better)
Translates to: LSDWAKDTWVSSKCKNKKYTYSL*MGILAP
Trigger: TGGGGCTAGAATTCCCATGCATAGAGAATATGTGTA...CTTTTTGTTCTTACATTTACTGCTGACCCAGGTATCTTTGGCCCAGTCACTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR GCA 90 bp AAGGAAGCATCGAATCTGCTTTTATTTCACATGTCACATTCGCTCGGGTCCTTTTTACAAAGCACATTGTaGTACTTTAAGCACCTCTTG +
Preference number: 4 (lower is better)
Translates to: KEASNLLLFHMSHSLGSFLQSTL*YFKHLL
Trigger: CAAGAGGTGCTTAAAGTAGCACAATGTGCTTTGTAA...AAAGGACCCGAGCGAATGTGACATGTGAAATAAAAGCAGATTCGATGCTTCCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR GCA 90 bp TTCAGGAACATACATTTGCTCTCAGAGATGACTCCAAGACTCAGTAATACACAAAACAAGCAAACCTTTTaGCTGGCCCTAAACACATCT +
Preference number: 4 (lower is better)
Translates to: FRNIHLLSEMTPRLSNTQNKQTF*LALNTS
Trigger: AGATGTGTTTAGGGCCAGGCAAAAGGTTTGCTTGTT...TTGTGTATTACTGAGTCTTGGAGTCATCTCTGAGAGCAAATGTATGTTCCTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR GCA 90 bp TTAAGTGACTGGGCCAAAGATACCTGGGTCAGCAGTAAATGTAAGAACAAAAAGAAAGGCAACAAGCAATaGAACTCCCAAATTACAGAG +
Preference number: 4 (lower is better)
Translates to: LSDWAKDTWVSSKCKNKKKGNKQ*NSQITE
Trigger: CTCTGTAATTTGGGAGTTGCATTGCTTGTTGCCTTT...CTTTTTGTTCTTACATTTACTGCTGACCCAGGTATCTTTGGCCCAGTCACTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616793.5
CDS-3UTR CCA 90 bp ATGAATGAGATCAGTCCATTGTTGATAGAGGAATGCAGATGTGAGAGTAGGACAAATTTGGAGATTAAATaGAGGGGATCGTCTCTCTCT +
Preference number: 4 (lower is better)
Translates to: MNEISPLLIEECRCESRTNLEIK*RGSSLS
Trigger: AGAGAGAGACGATCCCCTCCATTTAATCTCCAAATT...TGTCCTACTCTCACATCTGCATTCCTCTATCAACAATGGACTGATCTCATTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CCA 90 bp GTCTTCCTGGGATCTTATCCATGTTTTCGGTTACTCTTTAAGAGGCACCTTGACATTCTCATATATGCTTaGTCAAGAGCTTGTTTTCTG +
Preference number: 4 (lower is better)
Translates to: VFLGSYPCFRLLFKRHLDILIYA*SRACFL
Trigger: CAGAAAACAAGCTCTTGACCAAGCATATATGAGAAT...GTCAAGGTGCCTCTTAAAGAGTAACCGAAAACATGGATAAGATCCCAGGAAGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333010.6
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CCA 90 bp TTAAGTGACTGGGCCAAAGATACCTGGGTCAGCAGTAAATGTAAGAACAAAAAGTGCAATCAAGAGAGCTaGGAGATGCTTATCATAGAA +
Preference number: 4 (lower is better)
Translates to: LSDWAKDTWVSSKCKNKKCNQES*EMLIIE
Trigger: TTCTATGATAAGCATCTCCCAGCTCTCTTGATTGCA...CTTTTTGTTCTTACATTTACTGCTGACCCAGGTATCTTTGGCCCAGTCACTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CCA 90 bp ATGAATGAGATCAGTCCATTGTTGATAGAGGAATGCAGATGTGAGAGTAGGACACCTTTGTTTAATGACTaGCTCTCCTGTGGTAAAAGT +
Preference number: 4 (lower is better)
Translates to: MNEISPLLIEECRCESRTPLFND*LSCGKS
Trigger: ACTTTTACCACAGGAGAGCCAGTCATTAAACAAAGG...TGTCCTACTCTCACATCTGCATTCCTCTATCAACAATGGACTGATCTCATTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CCA 90 bp TTAAGTGACTGGGCCAAAGATACCTGGGTCAGCAGTAAATGTAAGAACAAAAAGCCTTTGTTTAATGACTaGCTCTCCTGTGGTAAAAGT +
Preference number: 4 (lower is better)
Translates to: LSDWAKDTWVSSKCKNKKPLFND*LSCGKS
Trigger: ACTTTTACCACAGGAGAGCCAGTCATTAAACAAAGG...CTTTTTGTTCTTACATTTACTGCTGACCCAGGTATCTTTGGCCCAGTCACTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CCA 90 bp GAGGCTCATGAGCAAGAGTTGGTAAAAATTACAGTTCAGTCTATAGTCTTGAGATCTACCTTATGGACTTaGGAAGACACATACAACCTG +
Preference number: 4 (lower is better)
Translates to: EAHEQELVKITVQSIVLRSTLWT*EDTYNL
Trigger: CAGGTTGTATGTGTCTTCCCAAGTCCATAAGGTAGA...TCTCAAGACTATAGACTGAACTGTAATTTTTACCAACTCTTGCTCATGAGCCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616793.5
3UTR CAA 72 bp ATTAGCTCTATACTTGAGTCCCCAAAGTATTGGATCTaGAAGGCTAAAACATGCATGAACCCTGTTGAGATG +
Preference number: 4 (lower is better)
Translates to: ISSILESPKYWI*KAKTCMNPVEM
Trigger: CATCTCAACAGGGTTCATGCATGTTTTAGCCTTCAAGATCCAATACTTTGGGGACTCAAGTATAGAGCTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616793.5
CDS-3UTR TCA 90 bp ATGAATGAGATCAGTCCATTGTTGATAGAGGAATGCAGATGTGAGAGTAGGACATGTTGCTCAATGACCTaGAGTTTTAGAAACTCTGTT +
Preference number: 4 (lower is better)
Translates to: MNEISPLLIEECRCESRTCCSMT*SFRNSV
Trigger: AACAGAGTTTCTAAAACTTCAGGTCATTGAGCAACA...TGTCCTACTCTCACATCTGCATTCCTCTATCAACAATGGACTGATCTCATTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp ATGAATGAGATCAGTCCATTGTTGATAGAGGAATGCAGATGTGAGAGTAGGACATGTTCTGTTGCTCAATaGCCTGAAGTTTTAGAAACT +
Preference number: 4 (lower is better)
Translates to: MNEISPLLIEECRCESRTCSVAQ*PEVLET
Trigger: AGTTTCTAAAACTTCAGGTCATTGAGCAACAGAACA...TGTCCTACTCTCACATCTGCATTCCTCTATCAACAATGGACTGATCTCATTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp TTCAGGAACATACATTTGCTCTCAGAGATGACTCCAAGACTCAGTAATACACAAGCTCTTTGGAGGGCCTaGTATTCTTTTGTTAATTGT +
Preference number: 4 (lower is better)
Translates to: FRNIHLLSEMTPRLSNTQALWRA*YSFVNC
Trigger: ACAATTAACAAAAGAATATCAGGCCCTCCAAAGAGC...TTGTGTATTACTGAGTCTTGGAGTCATCTCTGAGAGCAAATGTATGTTCCTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp AATTTTGCCATCTTTGAAGGTTTAGAAGCACTTGTCTTCCTGGGATCTTATCCAGCTCTTTGGAGGGCCTaGTATTCTTTTGTTAATTGT +
Preference number: 4 (lower is better)
Translates to: NFAIFEGLEALVFLGSYPALWRA*YSFVNC
Trigger: ACAATTAACAAAAGAATATCAGGCCCTCCAAAGAGC...TGGATAAGATCCCAGGAAGACAAGTGCTTCTAAACCTTCAAAGATGGCAAAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333010.6
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp AGCATATATTGTAGATTTTCAACAGGGTTGTGTAGGAACTGTCAAGTAAGAAACGTAGTTCTTAGCTTTTaGTCTCCCTCTCACTGGTGT +
Preference number: 4 (lower is better)
Translates to: SIYCRFSTGLCRNCQVRNVVLSF*SPSHWC
Trigger: ACACCAGTGAGAGGGAGATCAAAAGCTAAGAACTAC...GTTTCTTACTTGACAGTTCCTACACAACCCTGTTGAAAATCTACAATATATGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265272.9
ENST00000333010.6
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp AATTTTGCCATCTTTGAAGGTTTAGAAGCACTTGTCTTCCTGGGATCTTATCCAAAGTCAGGGAGCATGTaGTTTACAGTATCATCTTCT +
Preference number: 4 (lower is better)
Translates to: NFAIFEGLEALVFLGSYPKSGSM*FTVSSS
Trigger: AGAAGATGATACTGTAAATCACATGCTCCCTGACTT...TGGATAAGATCCCAGGAAGACAAGTGCTTCTAAACCTTCAAAGATGGCAAAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp GACCCCAGCATTCTAGTTTTTATTGTACATTCTTCAGTTATTGTTCTGGCTTTGTGGAACCTACCTAGTTaGATAAAGAATCCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: DPSILVFIVHSSVIVLALWNLPS*IKNPAG
Trigger: TCCTGCTGGATTCTTTATTCAACTAGGTAGGTTCCA...CAAAGCCAGAACAATAACTGAAGAATGTACAATAAAAACTAGAATGCTGGGGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp AATTTTGCCATCTTTGAAGGTTTAGAAGCACTTGTCTTCCTGGGATCTTATCCAGCTGTTGTTCTCATATaGCTTATAGCAGATAAGCAG +
Preference number: 4 (lower is better)
Translates to: NFAIFEGLEALVFLGSYPAVVLI*LIADKQ
Trigger: CTGCTTATCTGCTATAAGTCATATGAGAACAACAGC...TGGATAAGATCCCAGGAAGACAAGTGCTTCTAAACCTTCAAAGATGGCAAAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507386.5
ENST00000616793.5
CDS-3UTR GCA 90 bp AGCATATATTGTAGATTTTCAACAGGGTTGTGTAGGAACTGTCAAGTAAGAAACAGGAGAGGTTTACATTaGTTTTCGGTTTCCCGCACA +
Preference number: 4 (lower is better)
Translates to: SIYCRFSTGLCRNCQVRNRRGLH*FSVSRT
Trigger: TGTGCGGGAAACCGAAAAGCAATGTAAACCTCTCCT...GTTTCTTACTTGACAGTTCCTACACAACCCTGTTGAAAATCTACAATATATGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265272.9
ENST00000333010.6
ENST00000507386.5
ENST00000616793.5
CDS-3UTR GCA 90 bp CAAACTTTATTTCTCCTATTACTAGTGGAGAACACATTTGCTCTCTACCTAAGTAGGAGAGGTTTACATTaGTTTTCGGTTTCCCGCACA +
Preference number: 4 (lower is better)
Translates to: QTLFLLLLVENTFALYLSRRGLH*FSVSRT
Trigger: TGTGCGGGAAACCGAAAAGCAATGTAAACCTCTCCT...ACTTAGGTAGAGAGCAAATGTGTTCTCCACTAGTAATAGGAGAAATAAAGTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616793.5
CDS-3UTR GCA 90 bp AATTTTGCCATCTTTGAAGGTTTAGAAGCACTTGTCTTCCTGGGATCTTATCCACTCTTTCACATTTCTTaGCTAATGAGCATATGGCTC +
Preference number: 4 (lower is better)
Translates to: NFAIFEGLEALVFLGSYPLFHIS*LMSIWL
Trigger: GAGCCATATGCTCATTAGGCAAGAAATGTGAAAGAG...TGGATAAGATCCCAGGAAGACAAGTGCTTCTAAACCTTCAAAGATGGCAAAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507386.5
ENST00000616793.5
CDS-3UTR GCA 90 bp GACCCCAGCATTCTAGTTTTTATTGTACATTCTTCAGTTATTGTTCTGGCTTTGATTGTGAATCTGCCCTaGCCCATTCTGAAATGGAAT +
Preference number: 4 (lower is better)
Translates to: DPSILVFIVHSSVIVLALIVNLP*PILKWN
Trigger: ATTCCATTTCAGAATGGGGCAGGGCAGATTCACAAT...CAAAGCCAGAACAATAACTGAAGAATGTACAATAAAAACTAGAATGCTGGGGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616793.5
CDS-3UTR CCA 90 bp GAGGCTCATGAGCAAGAGTTGGTAAAAATTACAGTTCAGTCTATAGTCTTGAGATACTGTTTCTTATCCTaGAGTACGATGTCTCAGCAT +
Preference number: 4 (lower is better)
Translates to: EAHEQELVKITVQSIVLRYCFLS*STMSQH
Trigger: ATGCTGAGACATCGTACTCCAGGATAAGAAACAGTA...TCTCAAGACTATAGACTGAACTGTAATTTTTACCAACTCTTGCTCATGAGCCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CCA 90 bp AGCATATATTGTAGATTTTCAACAGGGTTGTGTAGGAACTGTCAAGTAAGAAACTGGAATTTCTCGTTTTaGGCTGCTCATGTTGCACTC +
Preference number: 4 (lower is better)
Translates to: SIYCRFSTGLCRNCQVRNWNFSF*AAHVAL
Trigger: GAGTGCAACATGAGCAGCCCAAAACGAGAAATTCCA...GTTTCTTACTTGACAGTTCCTACACAACCCTGTTGAAAATCTACAATATATGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265272.9
ENST00000333010.6
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CCA 90 bp TTCAGGAACATACATTTGCTCTCAGAGATGACTCCAAGACTCAGTAATACACAATGTTCTTCATTAGCTTaGTCGAGGTCATTCAGAGAT +
Preference number: 4 (lower is better)
Translates to: FRNIHLLSEMTPRLSNTQCSSLA*SRSFRD
Trigger: ATCTCTGAATGACCTCGACCAAGCTAATGAAGAACA...TTGTGTATTACTGAGTCTTGGAGTCATCTCTGAGAGCAAATGTATGTTCCTGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CCA 90 bp GAGGCTCATGAGCAAGAGTTGGTAAAAATTACAGTTCAGTCTATAGTCTTGAGAAACAGGCCTCTTAATTaGCTTGGAACTTCTTCTATG +
Preference number: 4 (lower is better)
Translates to: EAHEQELVKITVQSIVLRNRPLN*LGTSSM
Trigger: CATAGAAGAAGTTCCAAGCCAATTAAGAGGCCTGTT...TCTCAAGACTATAGACTGAACTGTAATTTTTACCAACTCTTGCTCATGAGCCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CCA 90 bp AATTTTGCCATCTTTGAAGGTTTAGAAGCACTTGTCTTCCTGGGATCTTATCCACCAGGTCTTCAATTTTaGCTTTATACCTTAGCACCT +
Preference number: 4 (lower is better)
Translates to: NFAIFEGLEALVFLGSYPPGLQF*LYTLAP
Trigger: AGGTGCTAAGGTATAAAGCCAAAATTGAAGACCTGG...TGGATAAGATCCCAGGAAGACAAGTGCTTCTAAACCTTCAAAGATGGCAAAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333010.6
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CCA 90 bp AATTTTGCCATCTTTGAAGGTTTAGAAGCACTTGTCTTCCTGGGATCTTATCCAAATTTGGAGATTAAATaGAGGGGATCGTCTCTCTCT +
Preference number: 4 (lower is better)
Translates to: NFAIFEGLEALVFLGSYPNLEIK*RGSSLS
Trigger: AGAGAGAGACGATCCCCTCCATTTAATCTCCAAATT...TGGATAAGATCCCAGGAAGACAAGTGCTTCTAAACCTTCAAAGATGGCAAAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333010.6
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CCA 90 bp AATTTTGCCATCTTTGAAGGTTTAGAAGCACTTGTCTTCCTGGGATCTTATCCAGTAGCTTCTAGTTCCTaGATTCTCATATATGCTTGG +
Preference number: 4 (lower is better)
Translates to: NFAIFEGLEALVFLGSYPVASSS*ILIYAW
Trigger: CCAAGCATATATGAGAATCCAGGAACTAGAAGCTAC...TGGATAAGATCCCAGGAAGACAAGTGCTTCTAAACCTTCAAAGATGGCAAAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333010.6
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CCA 90 bp GAGGCTCATGAGCAAGAGTTGGTAAAAATTACAGTTCAGTCTATAGTCTTGAGAGTAGCTTCTAGTTCCTaGATTCTCATATATGCTTGG +
Preference number: 4 (lower is better)
Translates to: EAHEQELVKITVQSIVLRVASSS*ILIYAW
Trigger: CCAAGCATATATGAGAATCCAGGAACTAGAAGCTAC...TCTCAAGACTATAGACTGAACTGTAATTTTTACCAACTCTTGCTCATGAGCCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CCA 90 bp GAGGCTCATGAGCAAGAGTTGGTAAAAATTACAGTTCAGTCTATAGTCTTGAGACATAGAAAGAGTTTCTaGCTCCCTACACATATTCTC +
Preference number: 4 (lower is better)
Translates to: EAHEQELVKITVQSIVLRHRKSF*LPTHIL
Trigger: GAGAATATGTGTAGGGAGCCAGAAACTCTTTCTATG...TCTCAAGACTATAGACTGAACTGTAATTTTTACCAACTCTTGCTCATGAGCCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CCA 90 bp AAGGAAGCATCGAATCTGCTTTTATTTCACATGTCACATTCGCTCGGGTCCTTTTGCCTAATGAGCATATaGCTCATATTTAATCTGGAA +
Preference number: 4 (lower is better)
Translates to: KEASNLLLFHMSHSLGSFCLMSI*LIFNLE
Trigger: TTCCAGATTAAATATGAGCCATATGCTCATTAGGCA...AAAGGACCCGAGCGAATGTGACATGTGAAATAAAAGCAGATTCGATGCTTCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CCA 90 bp ATGAATGAGATCAGTCCATTGTTGATAGAGGAATGCAGATGTGAGAGTAGGACAGACTTACAAATTTCTTaGTGGGTGGGAAAGCAAAAT +
Preference number: 4 (lower is better)
Translates to: MNEISPLLIEECRCESRTDLQIS*WVGKQN
Trigger: ATTTTGCTTTCCCACCCACCAAGAAATTTGTAAGTC...TGTCCTACTCTCACATCTGCATTCCTCTATCAACAATGGACTGATCTCATTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CCA 90 bp ATCCACTCTTTAGTAAGTTCGTGGGATCTTGATTGTGGGCAAAATTGGGCTCAACTATTTGCTGGTTTATaGGCCTGGATAATTGAAAAA +
Preference number: 4 (lower is better)
Translates to: IHSLVSSWDLDCGQNWAQLFAGL*AWIIEK
Trigger: TTTTTCAATTATCCAGGCCCATAAACCAGCAAATAG...TTGAGCCCAATTTTGCCCACAATCAAGATCCCACGAACTTACTAAAGAGTGGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616793.5
CDS-3UTR CCA 90 bp TTAAGTGACTGGGCCAAAGATACCTGGGTCAGCAGTAAATGTAAGAACAAAAAGGTCATGCTAATGAGATaGAAAGAAAGAACCCCAATT +
Preference number: 4 (lower is better)
Translates to: LSDWAKDTWVSSKCKNKKVMLMR*KERTPI
Trigger: AATTGGGGTTCTTTCTTTCCATCTCATTAGCATGAC...CTTTTTGTTCTTACATTTACTGCTGACCCAGGTATCTTTGGCCCAGTCACTTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616793.5
CDS-3UTR TCA 90 bp GAGGCTCATGAGCAAGAGTTGGTAAAAATTACAGTTCAGTCTATAGTCTTGAGATCAGCTATTCTCTTTTaGTTTCTTCGCAAATCAGGA +
Preference number: 4 (lower is better)
Translates to: EAHEQELVKITVQSIVLRSAILF*FLRKSG
Trigger: TCCTGATTTGCGAAGAAATCAAAAGAGAATAGCTGA...TCTCAAGACTATAGACTGAACTGTAATTTTTACCAACTCTTGCTCATGAGCCTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp AATTTTGCCATCTTTGAAGGTTTAGAAGCACTTGTCTTCCTGGGATCTTATCCATGTTGCTCAATGACCTaGAGTTTTAGAAACTCTGTT +
Preference number: 4 (lower is better)
Translates to: NFAIFEGLEALVFLGSYPCCSMT*SFRNSV
Trigger: AACAGAGTTTCTAAAACTTCAGGTCATTGAGCAACA...TGGATAAGATCCCAGGAAGACAAGTGCTTCTAAACCTTCAAAGATGGCAAAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333010.6
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp GACCCCAGCATTCTAGTTTTTATTGTACATTCTTCAGTTATTGTTCTGGCTTTGCCATCTGAGAATGGGTaGATTTGGAGATTAAATGGA +
Preference number: 4 (lower is better)
Translates to: DPSILVFIVHSSVIVLALPSENG*IWRLNG
Trigger: TCCATTTAATCTCCAAATTCACCCATTCTCAGATGG...CAAAGCCAGAACAATAACTGAAGAATGTACAATAAAAACTAGAATGCTGGGGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp TTCAGGAACATACATTTGCTCTCAGAGATGACTCCAAGACTCAGTAATACACAAGCTGTCCATCTATCTTaGTGTAATATAACACAGATG +
Preference number: 4 (lower is better)
Translates to: FRNIHLLSEMTPRLSNTQAVHLS*CNITQM
Trigger: CATCTGTGTTATATTACATCAAGATAGATGGACAGC...TTGTGTATTACTGAGTCTTGGAGTCATCTCTGAGAGCAAATGTATGTTCCTGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616793.5
CDS-3UTR GCA 90 bp GACCCCAGCATTCTAGTTTTTATTGTACATTCTTCAGTTATTGTTCTGGCTTTGCTTTCAAGCAGGTGCTaGCATGTTACTGTTTCTTAT +
Preference number: 4 (lower is better)
Translates to: DPSILVFIVHSSVIVLALLSSRC*HVTVSY
Trigger: ATAAGAAACAGTAACATGGCAGCACCTGCTTGAAAG...CAAAGCCAGAACAATAACTGAAGAATGTACAATAAAAACTAGAATGCTGGGGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR GCA 90 bp AGCATATATTGTAGATTTTCAACAGGGTTGTGTAGGAACTGTCAAGTAAGAAACCCCAAGATATCAAGCTaGTTTATGAGATCAGGGATG +
Preference number: 4 (lower is better)
Translates to: SIYCRFSTGLCRNCQVRNPKISS*FMRSGM
Trigger: CATCCCTGATCTCATAAAGCAGCTTGATATCTTGGG...GTTTCTTACTTGACAGTTCCTACACAACCCTGTTGAAAATCTACAATATATGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265272.9
ENST00000333010.6
ENST00000507386.5
ENST00000616793.5
CDS-3UTR GCA 90 bp AATTTTGCCATCTTTGAAGGTTTAGAAGCACTTGTCTTCCTGGGATCTTATCCACTGGATTCTCATATATaGTTGGTCAAGAGCTTGTTT +
Preference number: 4 (lower is better)
Translates to: NFAIFEGLEALVFLGSYPLDSHI*LVKSLF
Trigger: AAACAAGCTCTTGACCAAGCATATATGAGAATCCAG...TGGATAAGATCCCAGGAAGACAAGTGCTTCTAAACCTTCAAAGATGGCAAAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333010.6
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CCA 90 bp AGCATATATTGTAGATTTTCAACAGGGTTGTGTAGGAACTGTCAAGTAAGAAACCAAGCTTTGATACCTTaGACTTCTCTTGATGCAGCT +
Preference number: 4 (lower is better)
Translates to: SIYCRFSTGLCRNCQVRNQALIP*TSLDAA
Trigger: AGCTGCATCAAGAGAAGTCCAAGGTATCAAAGCTTG...GTTTCTTACTTGACAGTTCCTACACAACCCTGTTGAAAATCTACAATATATGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CCA 90 bp GACCCCAGCATTCTAGTTTTTATTGTACATTCTTCAGTTATTGTTCTGGCTTTGATAGATTTACTCATATaGGCCCTGCAACAGAAAGTG +
Preference number: 4 (lower is better)
Translates to: DPSILVFIVHSSVIVLALIDLLI*ALQQKV
Trigger: CACTTTCTGTTGCAGGGCCCATATGAGTAAATCTAT...CAAAGCCAGAACAATAACTGAAGAATGTACAATAAAAACTAGAATGCTGGGGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
3UTR CAA 72 bp TTCTTAGTTTTCAATATGAATGAGATCAGTCCATTGTaGATAGAGGAATGCAGATGTGAGAGTAGGACAAGG +
Preference number: 4 (lower is better)
Translates to: FLVFNMNEISPL*IEECRCESRTR
Trigger: CCTTGTCCTACTCTCACATCTGCATTCCTCTATCAACAATGGACTGATCTCATTCATATTGAAAACTAAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp GACCCCAGCATTCTAGTTTTTATTGTACATTCTTCAGTTATTGTTCTGGCTTTGTGTTCTGTTGCTCAATaGCCTGAAGTTTTAGAAACT +
Preference number: 4 (lower is better)
Translates to: DPSILVFIVHSSVIVLALCSVAQ*PEVLET
Trigger: AGTTTCTAAAACTTCAGGTCATTGAGCAACAGAACA...CAAAGCCAGAACAATAACTGAAGAATGTACAATAAAAACTAGAATGCTGGGGTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp AGCATATATTGTAGATTTTCAACAGGGTTGTGTAGGAACTGTCAAGTAAGAAACGCTCTTTGGAGGGCCTaGTATTCTTTTGTTAATTGT +
Preference number: 4 (lower is better)
Translates to: SIYCRFSTGLCRNCQVRNALWRA*YSFVNC
Trigger: ACAATTAACAAAAGAATATCAGGCCCTCCAAAGAGC...GTTTCTTACTTGACAGTTCCTACACAACCCTGTTGAAAATCTACAATATATGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265272.9
ENST00000333010.6
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp AGCATATATTGTAGATTTTCAACAGGGTTGTGTAGGAACTGTCAAGTAAGAAACTATCAAGCTGCTTTATaGGATCAGGGATGTTCACAT +
Preference number: 4 (lower is better)
Translates to: SIYCRFSTGLCRNCQVRNYQAAL*DQGCSH
Trigger: ATGTGAACATCCCTGATCTCATAAAGCAGCTTGATA...GTTTCTTACTTGACAGTTCCTACACAACCCTGTTGAAAATCTACAATATATGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265272.9
ENST00000333010.6
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp GACCCCAGCATTCTAGTTTTTATTGTACATTCTTCAGTTATTGTTCTGGCTTTGTTCTGTGCCACTCTTTaGCAGATTGAAATAATGCAA +
Preference number: 4 (lower is better)
Translates to: DPSILVFIVHSSVIVLALFCATL*QIEIMQ
Trigger: TTGCATTATTTCAATCTGTCAAAGAGTGGCACAGAA...CAAAGCCAGAACAATAACTGAAGAATGTACAATAAAAACTAGAATGCTGGGGTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616793.5
CDS-3UTR GCA 90 bp GACCCCAGCATTCTAGTTTTTATTGTACATTCTTCAGTTATTGTTCTGGCTTTGAGCCTTGATTTTATCTaGTTGGATCATATTGCTCAG +
Preference number: 4 (lower is better)
Translates to: DPSILVFIVHSSVIVLALSLDFI*LDHIAQ
Trigger: CTGAGCAATATGATCCAAGCAGATAAAATCAAGGCT...CAAAGCCAGAACAATAACTGAAGAATGTACAATAAAAACTAGAATGCTGGGGTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR GCA 90 bp AGCATATATTGTAGATTTTCAACAGGGTTGTGTAGGAACTGTCAAGTAAGAAACTTGTTGATAGAGGAATaGAGATGTGAGAGTAGGACA +
Preference number: 4 (lower is better)
Translates to: SIYCRFSTGLCRNCQVRNLLIEE*RCESRT
Trigger: TGTCCTACTCTCACATCTGCATTCCTCTATCAACAA...GTTTCTTACTTGACAGTTCCTACACAACCCTGTTGAAAATCTACAATATATGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR GCA 90 bp GACCCCAGCATTCTAGTTTTTATTGTACATTCTTCAGTTATTGTTCTGGCTTTGTTACAAAGCACATTGTaGTACTTTAAGCACCTCTTG +
Preference number: 4 (lower is better)
Translates to: DPSILVFIVHSSVIVLALLQSTL*YFKHLL
Trigger: CAAGAGGTGCTTAAAGTAGCACAATGTGCTTTGTAA...CAAAGCCAGAACAATAACTGAAGAATGTACAATAAAAACTAGAATGCTGGGGTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR GCA 90 bp GACCCCAGCATTCTAGTTTTTATTGTACATTCTTCAGTTATTGTTCTGGCTTTGGTGATACTGTCAGTTTaGTCCAAGCCTTTGTTTAAT +
Preference number: 4 (lower is better)
Translates to: DPSILVFIVHSSVIVLALVILSV*SKPLFN
Trigger: ATTAAACAAAGGCTTGGAGCAAACTGACAGTATCAC...CAAAGCCAGAACAATAACTGAAGAATGTACAATAAAAACTAGAATGCTGGGGTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR GCA 90 bp AGCATATATTGTAGATTTTCAACAGGGTTGTGTAGGAACTGTCAAGTAAGAAACCTCTTTCACATTTCTTaGCTAATGAGCATATGGCTC +
Preference number: 4 (lower is better)
Translates to: SIYCRFSTGLCRNCQVRNLFHIS*LMSIWL
Trigger: GAGCCATATGCTCATTAGGCAAGAAATGTGAAAGAG...GTTTCTTACTTGACAGTTCCTACACAACCCTGTTGAAAATCTACAATATATGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR GCA 90 bp CAAACTTTATTTCTCCTATTACTAGTGGAGAACACATTTGCTCTCTACCTAAGTAGAGCAAATTTCTATTaGTCTGTGTGTGTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: QTLFLLLLVENTFALYLSRANFY*SVCVCV
Trigger: CACACACACACACACAGAGCAATAGAAATTTGCTCT...ACTTAGGTAGAGAGCAAATGTGTTCTCCACTAGTAATAGGAGAAATAAAGTTTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616793.5
CDS-3UTR CCA 90 bp AGCATATATTGTAGATTTTCAACAGGGTTGTGTAGGAACTGTCAAGTAAGAAACTGTTCTTCATTAGCTTaGTCGAGGTCATTCAGAGAT +
Preference number: 4 (lower is better)
Translates to: SIYCRFSTGLCRNCQVRNCSSLA*SRSFRD
Trigger: ATCTCTGAATGACCTCGACCAAGCTAATGAAGAACA...GTTTCTTACTTGACAGTTCCTACACAACCCTGTTGAAAATCTACAATATATGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265272.9
ENST00000333010.6
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CCA 90 bp AGCATATATTGTAGATTTTCAACAGGGTTGTGTAGGAACTGTCAAGTAAGAAACAACAGGCCTCTTAATTaGCTTGGAACTTCTTCTATG +
Preference number: 4 (lower is better)
Translates to: SIYCRFSTGLCRNCQVRNNRPLN*LGTSSM
Trigger: CATAGAAGAAGTTCCAAGCCAATTAAGAGGCCTGTT...GTTTCTTACTTGACAGTTCCTACACAACCCTGTTGAAAATCTACAATATATGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265272.9
ENST00000333010.6
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CCA 90 bp AGCATATATTGTAGATTTTCAACAGGGTTGTGTAGGAACTGTCAAGTAAGAAACCCAGGTCTTCAATTTTaGCTTTATACCTTAGCACCT +
Preference number: 4 (lower is better)
Translates to: SIYCRFSTGLCRNCQVRNPGLQF*LYTLAP
Trigger: AGGTGCTAAGGTATAAAGCCAAAATTGAAGACCTGG...GTTTCTTACTTGACAGTTCCTACACAACCCTGTTGAAAATCTACAATATATGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265272.9
ENST00000333010.6
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CCA 90 bp TTCAGGAACATACATTTGCTCTCAGAGATGACTCCAAGACTCAGTAATACACAAATTCTCATATATGCTTaGTCAAGAGCTTGTTTTCTG +
Preference number: 4 (lower is better)
Translates to: FRNIHLLSEMTPRLSNTQILIYA*SRACFL
Trigger: CAGAAAACAAGCTCTTGACCAAGCATATATGAGAAT...TTGTGTATTACTGAGTCTTGGAGTCATCTCTGAGAGCAAATGTATGTTCCTGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CCA 90 bp AGCATATATTGTAGATTTTCAACAGGGTTGTGTAGGAACTGTCAAGTAAGAAACTGCAATCAAGAGAGCTaGGAGATGCTTATCATAGAA +
Preference number: 4 (lower is better)
Translates to: SIYCRFSTGLCRNCQVRNCNQES*EMLIIE
Trigger: TTCTATGATAAGCATCTCCCAGCTCTCTTGATTGCA...GTTTCTTACTTGACAGTTCCTACACAACCCTGTTGAAAATCTACAATATATGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CCA 90 bp AATTTTGCCATCTTTGAAGGTTTAGAAGCACTTGTCTTCCTGGGATCTTATCCATGCCTAATGAGCATATaGCTCATATTTAATCTGGAA +
Preference number: 4 (lower is better)
Translates to: NFAIFEGLEALVFLGSYPCLMSI*LIFNLE
Trigger: TTCCAGATTAAATATGAGCCATATGCTCATTAGGCA...TGGATAAGATCCCAGGAAGACAAGTGCTTCTAAACCTTCAAAGATGGCAAAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CCA 90 bp AGCATATATTGTAGATTTTCAACAGGGTTGTGTAGGAACTGTCAAGTAAGAAACACATCTAAAGCTGCTTaGACAATCATCCTAGCTGTT +
Preference number: 4 (lower is better)
Translates to: SIYCRFSTGLCRNCQVRNTSKAA*TIILAV
Trigger: AACAGCTAGGATGATTGTCCAAGCAGCTTTAGATGT...GTTTCTTACTTGACAGTTCCTACACAACCCTGTTGAAAATCTACAATATATGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CCA 90 bp AGCATATATTGTAGATTTTCAACAGGGTTGTGTAGGAACTGTCAAGTAAGAAACGGATCCATGAGTGACTaGAACACATATCCACAATTT +
Preference number: 4 (lower is better)
Translates to: SIYCRFSTGLCRNCQVRNGSMSD*NTYPQF
Trigger: AAATTGTGGATATGTGTTCCAGTCACTCATGGATCC...GTTTCTTACTTGACAGTTCCTACACAACCCTGTTGAAAATCTACAATATATGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CCA 90 bp CAAACTTTATTTCTCCTATTACTAGTGGAGAACACATTTGCTCTCTACCTAAGTGGATCCATGAGTGACTaGAACACATATCCACAATTT +
Preference number: 4 (lower is better)
Translates to: QTLFLLLLVENTFALYLSGSMSD*NTYPQF
Trigger: AAATTGTGGATATGTGTTCCAGTCACTCATGGATCC...ACTTAGGTAGAGAGCAAATGTGTTCTCCACTAGTAATAGGAGAAATAAAGTTTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616793.5
CDS-3UTR CCA 90 bp GACCCCAGCATTCTAGTTTTTATTGTACATTCTTCAGTTATTGTTCTGGCTTTGTGGAATAATAGAATTTaGCACTTGAAGAGGCCTTAC +
Preference number: 4 (lower is better)
Translates to: DPSILVFIVHSSVIVLALWNNRI*HLKRPY
Trigger: GTAAGGCCTCTTCAAGTGCCAAATTCTATTATTCCA...CAAAGCCAGAACAATAACTGAAGAATGTACAATAAAAACTAGAATGCTGGGGTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616793.5
CDS-3UTR CCA 90 bp GAGGCTCATGAGCAAGAGTTGGTAAAAATTACAGTTCAGTCTATAGTCTTGAGAAACACAGTAAACACCTaGGGAATTATGTATTCAAAC +
Preference number: 4 (lower is better)
Translates to: EAHEQELVKITVQSIVLRNTVNT*GIMYSN
Trigger: GTTTGAATACATAATTCCCCAGGTGTTTACTGTGTT...TCTCAAGACTATAGACTGAACTGTAATTTTTACCAACTCTTGCTCATGAGCCTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616793.5
CDS-3UTR TCA 90 bp AGCATATATTGTAGATTTTCAACAGGGTTGTGTAGGAACTGTCAAGTAAGAAACTGTTCTGTTGCTCAATaGCCTGAAGTTTTAGAAACT +
Preference number: 4 (lower is better)
Translates to: SIYCRFSTGLCRNCQVRNCSVAQ*PEVLET
Trigger: AGTTTCTAAAACTTCAGGTCATTGAGCAACAGAACA...GTTTCTTACTTGACAGTTCCTACACAACCCTGTTGAAAATCTACAATATATGCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265272.9
ENST00000333010.6
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp AGCATATATTGTAGATTTTCAACAGGGTTGTGTAGGAACTGTCAAGTAAGAAACATCAAGCTAATTATGTaGTACTGTCAGTTTGCTCCA +
Preference number: 4 (lower is better)
Translates to: SIYCRFSTGLCRNCQVRNIKLIM*YCQFAP
Trigger: TGGAGCAAACTGACAGTATCACATAATTAGCTTGAT...GTTTCTTACTTGACAGTTCCTACACAACCCTGTTGAAAATCTACAATATATGCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR TCA 90 bp CAAACTTTATTTCTCCTATTACTAGTGGAGAACACATTTGCTCTCTACCTAAGTATCAAGCTAATTATGTaGTACTGTCAGTTTGCTCCA +
Preference number: 4 (lower is better)
Translates to: QTLFLLLLVENTFALYLSIKLIM*YCQFAP
Trigger: TGGAGCAAACTGACAGTATCACATAATTAGCTTGAT...ACTTAGGTAGAGAGCAAATGTGTTCTCCACTAGTAATAGGAGAAATAAAGTTTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616793.5
CDS-3UTR TCA 90 bp CAAACTTTATTTCTCCTATTACTAGTGGAGAACACATTTGCTCTCTACCTAAGTGTTTACAGGAAAATTTaGCAGTCAATGGGCAAAAAG +
Preference number: 4 (lower is better)
Translates to: QTLFLLLLVENTFALYLSVYRKI*QSMGKK
Trigger: CTTTTTGCCCATTGACTGTCAAATTTTCCTGTAAAC...ACTTAGGTAGAGAGCAAATGTGTTCTCCACTAGTAATAGGAGAAATAAAGTTTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616793.5
CDS-3UTR GCA 90 bp AGCATATATTGTAGATTTTCAACAGGGTTGTGTAGGAACTGTCAAGTAAGAAACAGCCTTGATTTTATCTaGTTGGATCATATTGCTCAG +
Preference number: 4 (lower is better)
Translates to: SIYCRFSTGLCRNCQVRNSLDFI*LDHIAQ
Trigger: CTGAGCAATATGATCCAAGCAGATAAAATCAAGGCT...GTTTCTTACTTGACAGTTCCTACACAACCCTGTTGAAAATCTACAATATATGCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265272.9
ENST00000333010.6
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CCA 90 bp GACCCCAGCATTCTAGTTTTTATTGTACATTCTTCAGTTATTGTTCTGGCTTTGATTCTCATATATGCTTaGTCAAGAGCTTGTTTTCTG +
Preference number: 4 (lower is better)
Translates to: DPSILVFIVHSSVIVLALILIYA*SRACFL
Trigger: CAGAAAACAAGCTCTTGACCAAGCATATATGAGAAT...CAAAGCCAGAACAATAACTGAAGAATGTACAATAAAAACTAGAATGCTGGGGTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
3UTR CAA 72 bp ATCTTCTTAGTTTTCAATATGAATGAGATCAGTCCATaGTTGATAGAGGAATGCAGATGTGAGAGTAGGACA +
Preference number: 4 (lower is better)
Translates to: IFLVFNMNEISP*LIEECRCESRT
Trigger: TGTCCTACTCTCACATCTGCATTCCTCTATCAACAATGGACTGATCTCATTCATATTGAAAACTAAGAAGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
3UTR CAA 72 bp AGTTTAATATTCACATCTCTGTGGCAAACCCGACTCTaGGTAGAAATTTACTCATTGATTCTGCTGTGTTTT +
Preference number: 4 (lower is better)
Translates to: SLIFTSLWQTRL*VEIYSLILLCF
Trigger: AAAACACAGCAGAATCAATGAGTAAATTTCTACCAAGAGTCGGGTTTGCCACAGAGATGTGAATATTAAACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
3UTR CAA 72 bp GTTTTTATTGTACATTCTTCAGTTATTGTTCTGGCTTaGCAAATGCCAGTGCTAAAACTGAAGGATGATAGT +
Preference number: 4 (lower is better)
Translates to: VFIVHSSVIVLA*QMPVLKLKDDS
Trigger: ACTATCATCCTTCAGTTTTAGCACTGGCATTTGCAAAGCCAGAACAATAACTGAAGAATGTACAATAAAAAC
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
3UTR CAA 72 bp CAAGGATATATTCATTTTGAGGCTCATGAGCAAGAGTaGGTAAAAATTACAGTTCAGTCTATAGTCTTGAGA +
Preference number: 4 (lower is better)
Translates to: QGYIHFEAHEQE*VKITVQSIVLR
Trigger: TCTCAAGACTATAGACTGAACTGTAATTTTTACCAACTCTTGCTCATGAGCCTCAAAATGAATATATCCTTG
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
3UTR CAA 72 bp AAACATAAGAATTACACAATGGGTTTACAGGAAAATTaGACAGTCAATGGGCAAAAAGGAACAAGTTTGCCA +
Preference number: 4 (lower is better)
Translates to: KHKNYTMGLQEN*TVNGQKGTSLP
Trigger: TGGCAAACTTGTTCCTTTTTGCCCATTGACTGTCAAATTTTCCTGTAAACCCATTGTGTAATTCTTATGTTT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616793.5
CDS TCA 90 bp GCAGCAGCATCACCAGTTGGGCCTCCTCCCTCTCGGAGGATGGGGTaGGCTCGGAAGCAGCCAGGAACTTGCAGCAGACACCTCCTCTGG +
Preference number: 5 (lower is better)
Translates to: AAASPVGPPPSRRMG*ARKQPGTCSRHLLW
Trigger: CCAGAGGAGGTGTCTGCTGCAAGTTCCTGGCTGCTTCCGAGCTCACCCCATCCTCCGAGAGGGAGGAGGCCCAACTGGTGATGCTGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265272.9
ENST00000333010.6
CDS TCA 90 bp GCTCTGTGTCAAACAGTTTCCGGGCCTCCTCCCGGGCCTCAATGGTaGGCGCTGTCCTTACTTTGTCACTGCTGCCGTCGCGGAGAGCAC +
Preference number: 5 (lower is better)
Translates to: ALCQTVSGPPPGPQW*ALSLLCHCCRRGEH
Trigger: GTGCTCTCCGCGACGGCAGCAGTGACAAAGTAAGGACAGCGCTCACCATTGAGGCCCGGGAGGAGGCCCGGAAACTGTTTGACACAGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265272.9
ENST00000333010.6
ENST00000507343.1
ENST00000507386.5
ENST00000616793.5
CDS CCA 90 bp TCACTGCTGCCGTCGCGGAGAGCACAGAGAGCAGACTTGAGCCTCTaGATCTCTCCATCACGTACCTTCACCGTCCTTGACATTTCCTGC +
Preference number: 5 (lower is better)
Translates to: SLLPSRRAQRADLSL*ISPSRTFTVLDISC
Trigger: GCAGGAAATGTCAAGGACGGTGAAGGTACGTGATGGAGAGATCCAGAGGCTCAAGTCTGCTCTCTGTGCTCTCCGCGACGGCAGCAGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265272.9
ENST00000333010.6
ENST00000507343.1
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp TGTTGCCCAGGCCGTTATGAAACTCCTGGGCCCAAGCTATCCTGCCACCTTAGCCTCTTGGCGAGGCACTaGTTCCTTTCCAGGAGAGGT +
Preference number: 5 (lower is better)
Translates to: CCPGRYETPGPKLSCHLSLLARH*FLSRRG
Trigger: ACCTCTCCTGGAAAGGAACAAGTGCCTCGCCAAGAG...GCTAAGGTGGCAGGATAGCTTGGGCCCAGGAGTTTCATAACGGCCTGGGCAACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616793.5
CDS TCA 90 bp CTGCTTGGAGCTGTTCTTGAGCCTTGGCTTCTCGTTCAGCGTCGATaGTGCCTCCCGTCTGCTCCTGTAGGAGGGCATATGCTCTTTGGA +
Preference number: 5 (lower is better)
Translates to: LLGAVLEPWLLVQRR*CLPSAPVGGHMLFG
Trigger: TCCAAAGAGCATATGCCCTCCTACAGGAGCAGACGGGAGGCATCATCGACGCTGAACGAGAAGCCAAGGCTCAAGAACAGCTCCAAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265272.9
ENST00000333010.6
ENST00000504845.1
ENST00000507386.5
ENST00000616793.5
CDS TCA 90 bp TTACTTTGTCACTGCTGCCGTCGCGGAGAGCACAGAGAGCAGACTTaGGCCTCTGGATCTCTCCATCACGTACCTTCACCGTCCTTGACA +
Preference number: 5 (lower is better)
Translates to: LLCHCCRRGEHREQT*ASGSLHHVPSPSLT
Trigger: TGTCAAGGACGGTGAAGGTACGTGATGGAGAGATCCAGAGGCTCAAGTCTGCTCTCTGTGCTCTCCGCGACGGCAGCAGTGACAAAGTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265272.9
ENST00000333010.6
ENST00000507343.1
ENST00000507386.5
ENST00000616793.5
CDS TCA 90 bp CGCTCCGACTCCCACTTGATCTTCGAGATGGCTTCTTGGTGGGACTaGTGCTCACTCCGAAGGTCCCCAGCCTTGATTTTATCTGCTTGG +
Preference number: 5 (lower is better)
Translates to: RSDSHLIFEMASWWD*CSLRRSPALILSAW
Trigger: CCAAGCAGATAAAATCAAGGCTGGGGACCTTCGGAGTGAGCATCAGTCCCACCAAGAAGCCATCTCGAAGATCAAGTGGGAGTCGGAGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265272.9
ENST00000333010.6
ENST00000507343.1
ENST00000507386.5
ENST00000616793.5
CDS GCA 90 bp CTCTGGATCTCTCCATCACGTACCTTCACCGTCCTTGACATTTCCTaGTCGTGCTGCTTGATAAGGTTCTCCCTCACAGCCTGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: LWISPSRTFTVLDIS*SCCLIRFSLTACSS
Trigger: GGAGCTGCAGGCTGTGAGGGAGAACCTTATCAAGCAGCACGAGCAGGAAATGTCAAGGACGGTGAAGGTACGTGATGGAGAGATCCAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265272.9
ENST00000333010.6
ENST00000507343.1
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp TCAAGTTGGCTAGTGTTGGGTCACCAACACTGTAGAGGCACCCTCTTTCACATTACCAGCACCGTGTGCTaGCGCTGCTCCAGCTCACGA +
Preference number: 5 (lower is better)
Translates to: SSWLVLGHQHCRGTLFHITSTVC*RCSSSR
Trigger: TCGTGAGCTGGAGCAGCGCAAGCACACGGTGCTGGT...AATGTGAAAGAGGGTGCCTCTACAGTGTTGGTGACCCAACACTAGCCAACTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS TCA 90 bp TTCTTCGCAAATCCAGCCTCCGAATATCCCGCTCCGACTCCCACTTaGTCTTCGAGATGGCTTCTTGGTGGGACTGATGCTCACTCCGAA +
Preference number: 5 (lower is better)
Translates to: FFANPASEYPAPTPT*SSRWLLGGTDAHSE
Trigger: TTCGGAGTGAGCATCAGTCCCACCAAGAAGCCATCTCGAAGATCAAGTGGGAGTCGGAGCGGGATATTCGGAGGCTGGATTTGCGAAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507343.1
CDS GCA 90 bp GTGGGACTGATGCTCACTCCGAAGGTCCCCAGCCTTGATTTTATCTaGTTGGATCATATTGCTCAGAGCCTCGTCCACCTGCTTCTTGGC +
Preference number: 5 (lower is better)
Translates to: VGLMLTPKVPSLDFI*LDHIAQSLVHLLLG
Trigger: GCCAAGAAGCAGGTGGACGAGGCTCTGAGCAATATGATCCAAGCAGATAAAATCAAGGCTGGGGACCTTCGGAGTGAGCATCAGTCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265272.9
ENST00000333010.6
ENST00000507343.1
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp GTAAAAGTGGGGTTCTGTATGATGGCATGCATATGCAATCAAGAGAGCTGGGAGACCAGCACCGTGTGCTaGCGCTGCTCCAGCTCACGA +
Preference number: 5 (lower is better)
Translates to: VKVGFCMMACICNQESWETSTVC*RCSSSR
Trigger: TCGTGAGCTGGAGCAGCGCAAGCACACGGTGCTGGT...CTCCCAGCTCTCTTGATTGCATATGCATGCCATCATACAGAACCCCACTTTTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp TGTTGCCCAGGCCGTTATGAAACTCCTGGGCCCAAGCTATCCTGCCACCTTAGCCTTGACCAGAAAGAGTaGTTCGTCCAAAGCCTCCTT +
Preference number: 5 (lower is better)
Translates to: CCPGRYETPGPKLSCHLSLDQKE*FVQSLL
Trigger: AAGGAGGCTTTGGACGAACAACTCTTTCTGGTCAAG...GCTAAGGTGGCAGGATAGCTTGGGCCCAGGAGTTTCATAACGGCCTGGGCAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616793.5
CDS TCA 90 bp AGACTTGAGCCTCTGGATCTCTCCATCACGTACCTTCACCGTCCTTaGCATTTCCTGCTCGTGCTGCTTGATAAGGTTCTCCCTCACAGC +
Preference number: 5 (lower is better)
Translates to: RLEPLDLSITYLHRP*HFLLVLLDKVLPHS
Trigger: GCTGTGAGGGAGAACCTTATCAAGCAGCACGAGCAGGAAATGTCAAGGACGGTGAAGGTACGTGATGGAGAGATCCAGAGGCTCAAGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265272.9
ENST00000333010.6
ENST00000507343.1
ENST00000507386.5
ENST00000616793.5
CDS TCA 90 bp TGGCTTCTTGGTGGGACTGATGCTCACTCCGAAGGTCCCCAGCCTTaGTTTTATCTGCTTGGATCATATTGCTCAGAGCCTCGTCCACCT +
Preference number: 5 (lower is better)
Translates to: WLLGGTDAHSEGPQP*FYLLGSYCSEPRPP
Trigger: AGGTGGACGAGGCTCTGAGCAATATGATCCAAGCAGATAAAATCAAGGCTGGGGACCTTCGGAGTGAGCATCAGTCCCACCAAGAAGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265272.9
ENST00000333010.6
ENST00000507343.1
ENST00000507386.5
ENST00000616793.5
CDS GCA 90 bp CTGTTTCTTATCCTGGAGTACGATGTCTCAGCATCTACTGTGTGGTaGTCCTTGGTAAGGTCTCCTCAATCGCTGCCCTGGAAGCCCATG +
Preference number: 5 (lower is better)
Translates to: LFLILEYDVSASTVW*SLVRSPQSLPWKPM
Trigger: CATGGGCTTCCAGGGCAGCGATTGAGGAGACCTTACCAAGGAGCACCACACAGTAGATGCTGAGACATCGTACTCCAGGATAAGAAACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS CCA 90 bp CAAATCAGGACTGCTGCAGTGTTCGGAACCATCACCTGCCCTTCCTaGAATTTCTCGTTTTGGGCTGCTCATGTTGCACTCAGCCTCCTT +
Preference number: 5 (lower is better)
Translates to: QIRTAAVFGTITCPS*NFSFWAAHVALSLL
Trigger: AAGGAGGCTGAGTGCAACATGAGCAGCCCAAAACGAGAAATTCCAGGAAGGGCAGGTGATGGTTCCGAACACTGCAGCAGTCCTGATTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265272.9
ENST00000333010.6
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp AGGTGTGTGTTGGAGCAGACGGAATATAGATTTACTCATATGGGCCCTGCAACAAGCGCTGTCCTTACTTaGTCACTGCTGCCGTCGCGG +
Preference number: 5 (lower is better)
Translates to: RCVLEQTEYRFTHMGPATSAVLT*SLLPSR
Trigger: CCGCGACGGCAGCAGTGACAAAGTAAGGACAGCGCT...TGTTGCAGGGCCCATATGAGTAAATCTATATTCCGTCTGCTCCAACACACACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp ACTGGCTCTCCTGTGGTAAAAGTGGGGTTCTGTATGATGGCATGCATATGCAATAGCGCTGTCCTTACTTaGTCACTGCTGCCGTCGCGG +
Preference number: 5 (lower is better)
Translates to: TGSPVVKVGFCMMACICNSAVLT*SLLPSR
Trigger: CCGCGACGGCAGCAGTGACAAAGTAAGGACAGCGCT...ATTGCATATGCATGCCATCATACAGAACCCCACTTTTACCACAGGAGAGCCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp GGCACAGAGAGGTTAAGTGACTGGGCCAAAGATACCTGGGTCAGCAGTAAATGTTGCCATGAGCCGAGATaGTGCCAATGCACTCCAGCA +
Preference number: 5 (lower is better)
Translates to: GTERLSDWAKDTWVSSKCCHEPR*CQCTPA
Trigger: TGCTGGAGTGCATTGGCACAATCTCGGCTCATGGCA...ACATTTACTGCTGACCCAGGTATCTTTGGCCCAGTCACTTAACCTCTCTGTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp TGTTGCCCAGGCCGTTATGAAACTCCTGGGCCCAAGCTATCCTGCCACCTTAGCTGTGTGTGTGTGTGTTaGTGTGTGTATTCTGTGCCA +
Preference number: 5 (lower is better)
Translates to: CCPGRYETPGPKLSCHLSCVCVC*CVYSVP
Trigger: TGGCACAGAATACACACACAAACACACACACACACA...GCTAAGGTGGCAGGATAGCTTGGGCCCAGGAGTTTCATAACGGCCTGGGCAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616793.5
CDS CCA 90 bp TTACTGTTTCTTATCCTGGAGTACGATGTCTCAGCATCTACTGTGTaGTGCTCCTTGGTAAGGTCTCCTCAATCGCTGCCCTGGAAGCCC +
Preference number: 5 (lower is better)
Translates to: LLFLILEYDVSASTV*CSLVRSPQSLPWKP
Trigger: GGGCTTCCAGGGCAGCGATTGAGGAGACCTTACCAAGGAGCACCACACAGTAGATGCTGAGACATCGTACTCCAGGATAAGAAACAGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp GGCACAGAGAGGTTAAGTGACTGGGCCAAAGATACCTGGGTCAGCAGTAAATGTTCCTGCTCGTGCTGCTaGATAAGGTTCTCCCTCACA +
Preference number: 5 (lower is better)
Translates to: GTERLSDWAKDTWVSSKCSCSCC*IRFSLT
Trigger: TGTGAGGGAGAACCTTATCAAGCAGCACGAGCAGGA...ACATTTACTGCTGACCCAGGTATCTTTGGCCCAGTCACTTAACCTCTCTGTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp GTCTTCCTGGGATCTTATCCATGTTTTCGGTTACTCTTTAAGAGGCACCTTGACAGCGCTGTCCTTACTTaGTCACTGCTGCCGTCGCGG +
Preference number: 5 (lower is better)
Translates to: VFLGSYPCFRLLFKRHLDSAVLT*SLLPSR
Trigger: CCGCGACGGCAGCAGTGACAAAGTAAGGACAGCGCT...GTCAAGGTGCCTCTTAAAGAGTAACCGAAAACATGGATAAGATCCCAGGAAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333010.6
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp TGTTGCCCAGGCCGTTATGAAACTCCTGGGCCCAAGCTATCCTGCCACCTTAGCTTGTTCTTCATTAGCTaGGTCGAGGTCATTCAGAGA +
Preference number: 5 (lower is better)
Translates to: CCPGRYETPGPKLSCHLSLFFIS*VEVIQR
Trigger: TCTCTGAATGACCTCGACCAAGCTAATGAAGAACAA...GCTAAGGTGGCAGGATAGCTTGGGCCCAGGAGTTTCATAACGGCCTGGGCAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616793.5
CDS-3UTR CAA 90 bp GGCACAGAGAGGTTAAGTGACTGGGCCAAAGATACCTGGGTCAGCAGTAAATGTAGGCAGGAGAATCACTaGAATCCAGGAGGTGGAGCT +
Preference number: 5 (lower is better)
Translates to: GTERLSDWAKDTWVSSKCRQENH*NPGGGA
Trigger: AGCTCCACCTCCTGGATTCAAGTGATTCTCCTGCCT...ACATTTACTGCTGACCCAGGTATCTTTGGCCCAGTCACTTAACCTCTCTGTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp GGCACAGAGAGGTTAAGTGACTGGGCCAAAGATACCTGGGTCAGCAGTAAATGTCAGCTACTAGGGAGGTaGAGGCAGGAGAATCACTTG +
Preference number: 5 (lower is better)
Translates to: GTERLSDWAKDTWVSSKCQLLGR*RQENHL
Trigger: CAAGTGATTCTCCTGCCTCAACCTCCCTAGTAGCTG...ACATTTACTGCTGACCCAGGTATCTTTGGCCCAGTCACTTAACCTCTCTGTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS GCA 90 bp ATTTCTTCGCAAATCAGGACTGCTGCAGTGTTCGGAACCATCACCTaGCCTTCCTGGAATTTCTCGTTTTGGGCTGCTCATGTTGCACTC +
Preference number: 5 (lower is better)
Translates to: ISSQIRTAAVFGTIT*PSWNFSFWAAHVAL
Trigger: GAGTGCAACATGAGCAGCCCAAAACGAGAAATTCCAGGAAGGGCAGGTGATGGTTCCGAACACTGCAGCAGTCCTGATTTGCGAAGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265272.9
ENST00000333010.6
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp TCAAGTTGGCTAGTGTTGGGTCACCAACACTGTAGAGGCACCCTCTTTCACATTACTGTGTGGTGCTCCTaGGTAAGGTCTCCTCAATCG +
Preference number: 5 (lower is better)
Translates to: SSWLVLGHQHCRGTLFHITVWCS*VRSPQS
Trigger: CGATTGAGGAGACCTTACCAAGGAGCACCACACAGT...AATGTGAAAGAGGGTGCCTCTACAGTGTTGGTGACCCAACACTAGCCAACTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp GGCACAGAGAGGTTAAGTGACTGGGCCAAAGATACCTGGGTCAGCAGTAAATGTGTCTTCATTGGCAGCTaGAAGGGCAACAATGAGTGC +
Preference number: 5 (lower is better)
Translates to: GTERLSDWAKDTWVSSKCVFIGS*KGNNEC
Trigger: GCACTCATTGTTGCCCTTCAAGCTGCCAATGAAGAC...ACATTTACTGCTGACCCAGGTATCTTTGGCCCAGTCACTTAACCTCTCTGTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp TCAAGTTGGCTAGTGTTGGGTCACCAACACTGTAGAGGCACCCTCTTTCACATTGTACCTTCACCGTCCTaGACATTTCCTGCTCGTGCT +
Preference number: 5 (lower is better)
Translates to: SSWLVLGHQHCRGTLFHIVPSPS*TFPARA
Trigger: AGCACGAGCAGGAAATGTCAAGGACGGTGAAGGTAC...AATGTGAAAGAGGGTGCCTCTACAGTGTTGGTGACCCAACACTAGCCAACTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp GTCTTCCTGGGATCTTATCCATGTTTTCGGTTACTCTTTAAGAGGCACCTTGACTCGTCCACCTGCTTCTaGGCCGTTTTCAGGTCCGCA +
Preference number: 5 (lower is better)
Translates to: VFLGSYPCFRLLFKRHLDSSTCF*AVFRSA
Trigger: TGCGGACCTGAAAACGGCCAAGAAGCAGGTGGACGA...GTCAAGGTGCCTCTTAAAGAGTAACCGAAAACATGGATAAGATCCCAGGAAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333010.6
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp TCAAGTTGGCTAGTGTTGGGTCACCAACACTGTAGAGGCACCCTCTTTCACATTCTTCGAGATGGCTTCTaGGTGGGACTGATGCTCACT +
Preference number: 5 (lower is better)
Translates to: SSWLVLGHQHCRGTLFHILRDGF*VGLMLT
Trigger: AGTGAGCATCAGTCCCACCAAGAAGCCATCTCGAAG...AATGTGAAAGAGGGTGCCTCTACAGTGTTGGTGACCCAACACTAGCCAACTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp AGGTGTGTGTTGGAGCAGACGGAATATAGATTTACTCATATGGGCCCTGCAACACGCTCCGACTCCCACTaGATCTTCGAGATGGCTTCT +
Preference number: 5 (lower is better)
Translates to: RCVLEQTEYRFTHMGPATRSDSH*IFEMAS
Trigger: AGAAGCCATCTCGAAGATCAAGTGGGAGTCGGAGCG...TGTTGCAGGGCCCATATGAGTAAATCTATATTCCGTCTGCTCCAACACACACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp ACTGGCTCTCCTGTGGTAAAAGTGGGGTTCTGTATGATGGCATGCATATGCAATTGCCATGAGCCGAGATaGTGCCAATGCACTCCAGCA +
Preference number: 5 (lower is better)
Translates to: TGSPVVKVGFCMMACICNCHEPR*CQCTPA
Trigger: TGCTGGAGTGCATTGGCACAATCTCGGCTCATGGCA...ATTGCATATGCATGCCATCATACAGAACCCCACTTTTACCACAGGAGAGCCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS CCA 90 bp AATCCTGCCCTTTCTGAGCCAGAGTCGCTTCCAGGTCTTCAATTTTaGCTTTATACCTTAGCACCTCTGCTTGGAGCTGTTCTTGAGCCT +
Preference number: 5 (lower is better)
Translates to: NPALSEPESLPGLQF*LYTLAPLLGAVLEP
Trigger: AGGCTCAAGAACAGCTCCAAGCAGAGGTGCTAAGGTATAAAGCCAAAATTGAAGACCTGGAAGCGACTCTGGCTCAGAAAGGGCAGGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265272.9
ENST00000333010.6
ENST00000504845.1
ENST00000616793.5
CDS CCA 90 bp CTATCTGCCCTTTCTGAGCCAGAGTCGCTTCCAGGTCTTCAATTTTaGCTTTATACCTTAGCACCTCTGCTTGGAGCTGTTCTTGAGCCT +
Preference number: 5 (lower is better)
Translates to: LSALSEPESLPGLQF*LYTLAPLLGAVLEP
Trigger: AGGCTCAAGAACAGCTCCAAGCAGAGGTGCTAAGGTATAAAGCCAAAATTGAAGACCTGGAAGCGACTCTGGCTCAGAAAGGGCAGATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507386.5
CDS-3UTR CAA 90 bp TTCAGGAACATACATTTGCTCTCAGAGATGACTCCAAGACTCAGTAATACACAACAGCAGCATCACCAGTaGGGCCTCCTCCCTCTCGGA +
Preference number: 5 (lower is better)
Translates to: FRNIHLLSEMTPRLSNTQQQHHQ*GLLPLG
Trigger: TCCGAGAGGGAGGAGGCCCAACTGGTGATGCTGCTG...TTGTGTATTACTGAGTCTTGGAGTCATCTCTGAGAGCAAATGTATGTTCCTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265272.9
ENST00000616793.5
CDS-3UTR CAA 90 bp AATTTTGCCATCTTTGAAGGTTTAGAAGCACTTGTCTTCCTGGGATCTTATCCACAGCAGCATCACCAGTaGGGCCTCCTCCCTCTCGGA +
Preference number: 5 (lower is better)
Translates to: NFAIFEGLEALVFLGSYPQQHHQ*GLLPLG
Trigger: TCCGAGAGGGAGGAGGCCCAACTGGTGATGCTGCTG...TGGATAAGATCCCAGGAAGACAAGTGCTTCTAAACCTTCAAAGATGGCAAAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333010.6
ENST00000616793.5
CDS-3UTR CAA 90 bp GTAAAAGTGGGGTTCTGTATGATGGCATGCATATGCAATCAAGAGAGCTGGGAGTCCTGCTCGTGCTGCTaGATAAGGTTCTCCCTCACA +
Preference number: 5 (lower is better)
Translates to: VKVGFCMMACICNQESWESCSCC*IRFSLT
Trigger: TGTGAGGGAGAACCTTATCAAGCAGCACGAGCAGGA...CTCCCAGCTCTCTTGATTGCATATGCATGCCATCATACAGAACCCCACTTTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp AGGTGTGTGTTGGAGCAGACGGAATATAGATTTACTCATATGGGCCCTGCAACATCCTGCTCGTGCTGCTaGATAAGGTTCTCCCTCACA +
Preference number: 5 (lower is better)
Translates to: RCVLEQTEYRFTHMGPATSCSCC*IRFSLT
Trigger: TGTGAGGGAGAACCTTATCAAGCAGCACGAGCAGGA...TGTTGCAGGGCCCATATGAGTAAATCTATATTCCGTCTGCTCCAACACACACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp AAGGAAGCATCGAATCTGCTTTTATTTCACATGTCACATTCGCTCGGGTCCTTTTCGTCCACCTGCTTCTaGGCCGTTTTCAGGTCCGCA +
Preference number: 5 (lower is better)
Translates to: KEASNLLLFHMSHSLGSFSSTCF*AVFRSA
Trigger: TGCGGACCTGAAAACGGCCAAGAAGCAGGTGGACGA...AAAGGACCCGAGCGAATGTGACATGTGAAATAAAAGCAGATTCGATGCTTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp GTCTTCCTGGGATCTTATCCATGTTTTCGGTTACTCTTTAAGAGGCACCTTGACCGCTCCGACTCCCACTaGATCTTCGAGATGGCTTCT +
Preference number: 5 (lower is better)
Translates to: VFLGSYPCFRLLFKRHLDRSDSH*IFEMAS
Trigger: AGAAGCCATCTCGAAGATCAAGTGGGAGTCGGAGCG...GTCAAGGTGCCTCTTAAAGAGTAACCGAAAACATGGATAAGATCCCAGGAAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333010.6
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp GGCACAGAGAGGTTAAGTGACTGGGCCAAAGATACCTGGGTCAGCAGTAAATGTATCCTGTCCTTGGCTTaGATTTCATCCATCAGCCTC +
Preference number: 5 (lower is better)
Translates to: GTERLSDWAKDTWVSSKCILSLA*ISSISL
Trigger: GAGGCTGATGGATGAAATCAAAGCCAAGGACAGGAT...ACATTTACTGCTGACCCAGGTATCTTTGGCCCAGTCACTTAACCTCTCTGTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp GGCACAGAGAGGTTAAGTGACTGGGCCAAAGATACCTGGGTCAGCAGTAAATGTTCAAGTTGGCTAGTGTaGGGTCACCAACACTGTAGA +
Preference number: 5 (lower is better)
Translates to: GTERLSDWAKDTWVSSKCSSWLV*GHQHCR
Trigger: TCTACAGTGTTGGTGACCCAACACTAGCCAACTTGA...ACATTTACTGCTGACCCAGGTATCTTTGGCCCAGTCACTTAACCTCTCTGTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp GGCACAGAGAGGTTAAGTGACTGGGCCAAAGATACCTGGGTCAGCAGTAAATGTGAAGGAAGGTGTGTGTaGGAGCAGACGGAATATAGA +
Preference number: 5 (lower is better)
Translates to: GTERLSDWAKDTWVSSKCEGRCV*EQTEYR
Trigger: TCTATATTCCGTCTGCTCCAACACACACCTTCCTTC...ACATTTACTGCTGACCCAGGTATCTTTGGCCCAGTCACTTAACCTCTCTGTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp GACCCCAGCATTCTAGTTTTTATTGTACATTCTTCAGTTATTGTTCTGGCTTTGACCAGCACCGTGTGCTaGCGCTGCTCCAGCTCACGA +
Preference number: 5 (lower is better)
Translates to: DPSILVFIVHSSVIVLALTSTVC*RCSSSR
Trigger: TCGTGAGCTGGAGCAGCGCAAGCACACGGTGCTGGT...CAAAGCCAGAACAATAACTGAAGAATGTACAATAAAAACTAGAATGCTGGGGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp GTCTTCCTGGGATCTTATCCATGTTTTCGGTTACTCTTTAAGAGGCACCTTGACGTACCTTCACCGTCCTaGACATTTCCTGCTCGTGCT +
Preference number: 5 (lower is better)
Translates to: VFLGSYPCFRLLFKRHLDVPSPS*TFPARA
Trigger: AGCACGAGCAGGAAATGTCAAGGACGGTGAAGGTAC...GTCAAGGTGCCTCTTAAAGAGTAACCGAAAACATGGATAAGATCCCAGGAAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333010.6
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp TTAATGACTGGCTCTCCTGTGGTAAAAGTGGGGTTCTGTATGATGGCATGCATAGTACCTTCACCGTCCTaGACATTTCCTGCTCGTGCT +
Preference number: 5 (lower is better)
Translates to: LMTGSPVVKVGFCMMACIVPSPS*TFPARA
Trigger: AGCACGAGCAGGAAATGTCAAGGACGGTGAAGGTAC...TATGCATGCCATCATACAGAACCCCACTTTTACCACAGGAGAGCCAGTCATTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp AATTTTGCCATCTTTGAAGGTTTAGAAGCACTTGTCTTCCTGGGATCTTATCCAAGCGCTGTCCTTACTTaGTCACTGCTGCCGTCGCGG +
Preference number: 5 (lower is better)
Translates to: NFAIFEGLEALVFLGSYPSAVLT*SLLPSR
Trigger: CCGCGACGGCAGCAGTGACAAAGTAAGGACAGCGCT...TGGATAAGATCCCAGGAAGACAAGTGCTTCTAAACCTTCAAAGATGGCAAAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333010.6
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp ACTGGCTCTCCTGTGGTAAAAGTGGGGTTCTGTATGATGGCATGCATATGCAATCGAAGGTCCCCAGCCTaGATTTTATCTGCTTGGATC +
Preference number: 5 (lower is better)
Translates to: TGSPVVKVGFCMMACICNRRSPA*ILSAWI
Trigger: GATCCAAGCAGATAAAATCAAGGCTGGGGACCTTCG...ATTGCATATGCATGCCATCATACAGAACCCCACTTTTACCACAGGAGAGCCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp GTAAAAGTGGGGTTCTGTATGATGGCATGCATATGCAATCAAGAGAGCTGGGAGCGAAGGTCCCCAGCCTaGATTTTATCTGCTTGGATC +
Preference number: 5 (lower is better)
Translates to: VKVGFCMMACICNQESWERRSPA*ILSAWI
Trigger: GATCCAAGCAGATAAAATCAAGGCTGGGGACCTTCG...CTCCCAGCTCTCTTGATTGCATATGCATGCCATCATACAGAACCCCACTTTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp GTCTTCCTGGGATCTTATCCATGTTTTCGGTTACTCTTTAAGAGGCACCTTGACCTTCGAGATGGCTTCTaGGTGGGACTGATGCTCACT +
Preference number: 5 (lower is better)
Translates to: VFLGSYPCFRLLFKRHLDLRDGF*VGLMLT
Trigger: AGTGAGCATCAGTCCCACCAAGAAGCCATCTCGAAG...GTCAAGGTGCCTCTTAAAGAGTAACCGAAAACATGGATAAGATCCCAGGAAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333010.6
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp TCAAGTTGGCTAGTGTTGGGTCACCAACACTGTAGAGGCACCCTCTTTCACATTCTGGAATTTCTCGTTTaGGGCTGCTCATGTTGCACT +
Preference number: 5 (lower is better)
Translates to: SSWLVLGHQHCRGTLFHILEFLV*GCSCCT
Trigger: AGTGCAACATGAGCAGCCCAAAACGAGAAATTCCAG...AATGTGAAAGAGGGTGCCTCTACAGTGTTGGTGACCCAACACTAGCCAACTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp TGCTTTTATTTCACATGTCACATTCGCTCGGGTCCTTTGACTTCGTTACCAGTTCTCTTGGCGAGGCACTaGTTCCTTTCCAGGAGAGGT +
Preference number: 5 (lower is better)
Translates to: CFYFTCHIRSGPLTSLPVLLARH*FLSRRG
Trigger: ACCTCTCCTGGAAAGGAACAAGTGCCTCGCCAAGAG...AACTGGTAACGAAGTCAAAGGACCCGAGCGAATGTGACATGTGAAATAAAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp AAGGAAGCATCGAATCTGCTTTTATTTCACATGTCACATTCGCTCGGGTCCTTTTGCCATGAGCCGAGATaGTGCCAATGCACTCCAGCA +
Preference number: 5 (lower is better)
Translates to: KEASNLLLFHMSHSLGSFCHEPR*CQCTPA
Trigger: TGCTGGAGTGCATTGGCACAATCTCGGCTCATGGCA...AAAGGACCCGAGCGAATGTGACATGTGAAATAAAAGCAGATTCGATGCTTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp TCAAGTTGGCTAGTGTTGGGTCACCAACACTGTAGAGGCACCCTCTTTCACATTGAAGGAAGGTGTGTGTaGGAGCAGACGGAATATAGA +
Preference number: 5 (lower is better)
Translates to: SSWLVLGHQHCRGTLFHIEGRCV*EQTEYR
Trigger: TCTATATTCCGTCTGCTCCAACACACACCTTCCTTC...AATGTGAAAGAGGGTGCCTCTACAGTGTTGGTGACCCAACACTAGCCAACTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp AGCATATATTGTAGATTTTCAACAGGGTTGTGTAGGAACTGTCAAGTAAGAAACCAGCAGCATCACCAGTaGGGCCTCCTCCCTCTCGGA +
Preference number: 5 (lower is better)
Translates to: SIYCRFSTGLCRNCQVRNQQHHQ*GLLPLG
Trigger: TCCGAGAGGGAGGAGGCCCAACTGGTGATGCTGCTG...GTTTCTTACTTGACAGTTCCTACACAACCCTGTTGAAAATCTACAATATATGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000333010.6
ENST00000616793.5
CDS-3UTR CAA 90 bp ATGAATGAGATCAGTCCATTGTTGATAGAGGAATGCAGATGTGAGAGTAGGACATCCCTCTGTCTCTGGTaGGCGATGGTGCGAATAGGA +
Preference number: 5 (lower is better)
Translates to: MNEISPLLIEECRCESRTSLCLW*AMVRIG
Trigger: TCCTATTCGCACCATCGCCAACCAGAGACAGAGGGA...TGTCCTACTCTCACATCTGCATTCCTCTATCAACAATGGACTGATCTCATTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265272.9
ENST00000616793.5
CDS-3UTR CAA 90 bp TGCTTTTATTTCACATGTCACATTCGCTCGGGTCCTTTGACTTCGTTACCAGTTACTGTGTGGTGCTCCTaGGTAAGGTCTCCTCAATCG +
Preference number: 5 (lower is better)
Translates to: CFYFTCHIRSGPLTSLPVTVWCS*VRSPQS
Trigger: CGATTGAGGAGACCTTACCAAGGAGCACCACACAGT...AACTGGTAACGAAGTCAAAGGACCCGAGCGAATGTGACATGTGAAATAAAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp AGCATATATTGTAGATTTTCAACAGGGTTGTGTAGGAACTGTCAAGTAAGAAACACCAGCACCGTGTGCTaGCGCTGCTCCAGCTCACGA +
Preference number: 5 (lower is better)
Translates to: SIYCRFSTGLCRNCQVRNTSTVC*RCSSSR
Trigger: TCGTGAGCTGGAGCAGCGCAAGCACACGGTGCTGGT...GTTTCTTACTTGACAGTTCCTACACAACCCTGTTGAAAATCTACAATATATGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265272.9
ENST00000333010.6
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp TTAAGTGACTGGGCCAAAGATACCTGGGTCAGCAGTAAATGTAAGAACAAAAAGGCACAGAGAGCAGACTaGAGCCTCTGGATCTCTCCA +
Preference number: 5 (lower is better)
Translates to: LSDWAKDTWVSSKCKNKKAQRAD*SLWISP
Trigger: TGGAGAGATCCAGAGGCTCAAGTCTGCTCTCTGTGC...CTTTTTGTTCTTACATTTACTGCTGACCCAGGTATCTTTGGCCCAGTCACTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp TTCAGGAACATACATTTGCTCTCAGAGATGACTCCAAGACTCAGTAATACACAATCGTCCACCTGCTTCTaGGCCGTTTTCAGGTCCGCA +
Preference number: 5 (lower is better)
Translates to: FRNIHLLSEMTPRLSNTQSSTCF*AVFRSA
Trigger: TGCGGACCTGAAAACGGCCAAGAAGCAGGTGGACGA...TTGTGTATTACTGAGTCTTGGAGTCATCTCTGAGAGCAAATGTATGTTCCTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp TGCTTTTATTTCACATGTCACATTCGCTCGGGTCCTTTGACTTCGTTACCAGTTTCTGCTTGGATCATATaGCTCAGAGCCTCGTCCACC +
Preference number: 5 (lower is better)
Translates to: CFYFTCHIRSGPLTSLPVSAWII*LRASST
Trigger: GGTGGACGAGGCTCTGAGCAATATGATCCAAGCAGA...AACTGGTAACGAAGTCAAAGGACCCGAGCGAATGTGACATGTGAAATAAAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp AAGGAAGCATCGAATCTGCTTTTATTTCACATGTCACATTCGCTCGGGTCCTTTTCTGCTTGGATCATATaGCTCAGAGCCTCGTCCACC +
Preference number: 5 (lower is better)
Translates to: KEASNLLLFHMSHSLGSFSAWII*LRASST
Trigger: GGTGGACGAGGCTCTGAGCAATATGATCCAAGCAGA...AAAGGACCCGAGCGAATGTGACATGTGAAATAAAAGCAGATTCGATGCTTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp GTCTTCCTGGGATCTTATCCATGTTTTCGGTTACTCTTTAAGAGGCACCTTGACCGAAGGTCCCCAGCCTaGATTTTATCTGCTTGGATC +
Preference number: 5 (lower is better)
Translates to: VFLGSYPCFRLLFKRHLDRRSPA*ILSAWI
Trigger: GATCCAAGCAGATAAAATCAAGGCTGGGGACCTTCG...GTCAAGGTGCCTCTTAAAGAGTAACCGAAAACATGGATAAGATCCCAGGAAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000333010.6
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp ATGAATGAGATCAGTCCATTGTTGATAGAGGAATGCAGATGTGAGAGTAGGACACGCTCCGACTCCCACTaGATCTTCGAGATGGCTTCT +
Preference number: 5 (lower is better)
Translates to: MNEISPLLIEECRCESRTRSDSH*IFEMAS
Trigger: AGAAGCCATCTCGAAGATCAAGTGGGAGTCGGAGCG...TGTCCTACTCTCACATCTGCATTCCTCTATCAACAATGGACTGATCTCATTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp GTAAAAGTGGGGTTCTGTATGATGGCATGCATATGCAATCAAGAGAGCTGGGAGATCCTGTCCTTGGCTTaGATTTCATCCATCAGCCTC +
Preference number: 5 (lower is better)
Translates to: VKVGFCMMACICNQESWEILSLA*ISSISL
Trigger: GAGGCTGATGGATGAAATCAAAGCCAAGGACAGGAT...CTCCCAGCTCTCTTGATTGCATATGCATGCCATCATACAGAACCCCACTTTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp GGCACAGAGAGGTTAAGTGACTGGGCCAAAGATACCTGGGTCAGCAGTAAATGTAAGATGATCCTGTCCTaGGCTTTGATTTCATCCATC +
Preference number: 5 (lower is better)
Translates to: GTERLSDWAKDTWVSSKCKMILS*ALISSI
Trigger: GATGGATGAAATCAAAGCCAAGGACAGGATCATCTT...ACATTTACTGCTGACCCAGGTATCTTTGGCCCAGTCACTTAACCTCTCTGTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp AAGGAAGCATCGAATCTGCTTTTATTTCACATGTCACATTCGCTCGGGTCCTTTTGCTTGGAGCTGTTCTaGAGCCTTGGCTTCTCGTTC +
Preference number: 5 (lower is better)
Translates to: KEASNLLLFHMSHSLGSFCLELF*SLGFSF
Trigger: GAACGAGAAGCCAAGGCTCAAGAACAGCTCCAAGCA...AAAGGACCCGAGCGAATGTGACATGTGAAATAAAAGCAGATTCGATGCTTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp GTAAAAGTGGGGTTCTGTATGATGGCATGCATATGCAATCAAGAGAGCTGGGAGATTCGCTCGGGTCCTTaGACTTCGTTACCAGTTTTG +
Preference number: 5 (lower is better)
Translates to: VKVGFCMMACICNQESWEIRSGP*TSLPVL
Trigger: CAAAACTGGTAACGAAGTCAAAGGACCCGAGCGAAT...CTCCCAGCTCTCTTGATTGCATATGCATGCCATCATACAGAACCCCACTTTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp GGCACAGAGAGGTTAAGTGACTGGGCCAAAGATACCTGGGTCAGCAGTAAATGTAAAAGTAGAGCTATCTaGTTGCTGTCATCTGTCTGG +
Preference number: 5 (lower is better)
Translates to: GTERLSDWAKDTWVSSKCKSRAI*LLSSVW
Trigger: CCAGACAGATGACAGCAACAAGATAGCTCTACTTTT...ACATTTACTGCTGACCCAGGTATCTTTGGCCCAGTCACTTAACCTCTCTGTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp AAGGAAGCATCGAATCTGCTTTTATTTCACATGTCACATTCGCTCGGGTCCTTTCAGCTACTAGGGAGGTaGAGGCAGGAGAATCACTTG +
Preference number: 5 (lower is better)
Translates to: KEASNLLLFHMSHSLGSFQLLGR*RQENHL
Trigger: CAAGTGATTCTCCTGCCTCAACCTCCCTAGTAGCTG...AAAGGACCCGAGCGAATGTGACATGTGAAATAAAAGCAGATTCGATGCTTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp AGGTGTGTGTTGGAGCAGACGGAATATAGATTTACTCATATGGGCCCTGCAACATCAAGTTGGCTAGTGTaGGGTCACCAACACTGTAGA +
Preference number: 5 (lower is better)
Translates to: RCVLEQTEYRFTHMGPATSSWLV*GHQHCR
Trigger: TCTACAGTGTTGGTGACCCAACACTAGCCAACTTGA...TGTTGCAGGGCCCATATGAGTAAATCTATATTCCGTCTGCTCCAACACACACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp AATTTTGCCATCTTTGAAGGTTTAGAAGCACTTGTCTTCCTGGGATCTTATCCATCCCTCTGTCTCTGGTaGGCGATGGTGCGAATAGGA +
Preference number: 5 (lower is better)
Translates to: NFAIFEGLEALVFLGSYPSLCLW*AMVRIG
Trigger: TCCTATTCGCACCATCGCCAACCAGAGACAGAGGGA...TGGATAAGATCCCAGGAAGACAAGTGCTTCTAAACCTTCAAAGATGGCAAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333010.6
ENST00000616793.5
CDS-3UTR CAA 90 bp TCAAGTTGGCTAGTGTTGGGTCACCAACACTGTAGAGGCACCCTCTTTCACATTTACCTTGGACTTCTCTaGATGCAGCTCTATCTGAAT +
Preference number: 5 (lower is better)
Translates to: SSWLVLGHQHCRGTLFHIYLGLL*MQLYLN
Trigger: ATTCAGATAGAGCTGCATCAAGAGAAGTCCAAGGTA...AATGTGAAAGAGGGTGCCTCTACAGTGTTGGTGACCCAACACTAGCCAACTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp ATGAATGAGATCAGTCCATTGTTGATAGAGGAATGCAGATGTGAGAGTAGGACATCATGGAGCTTGGCTTaGAGTTCTGTCACCAGCACC +
Preference number: 5 (lower is better)
Translates to: MNEISPLLIEECRCESRTSWSLA*SSVTST
Trigger: GGTGCTGGTGACAGAACTCAAAGCCAAGCTCCATGA...TGTCCTACTCTCACATCTGCATTCCTCTATCAACAATGGACTGATCTCATTCAT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp AATTTTGCCATCTTTGAAGGTTTAGAAGCACTTGTCTTCCTGGGATCTTATCCAGCACAGAGAGCAGACTaGAGCCTCTGGATCTCTCCA +
Preference number: 5 (lower is better)
Translates to: NFAIFEGLEALVFLGSYPAQRAD*SLWISP
Trigger: TGGAGAGATCCAGAGGCTCAAGTCTGCTCTCTGTGC...TGGATAAGATCCCAGGAAGACAAGTGCTTCTAAACCTTCAAAGATGGCAAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333010.6
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp GACCCCAGCATTCTAGTTTTTATTGTACATTCTTCAGTTATTGTTCTGGCTTTGTCGTCCACCTGCTTCTaGGCCGTTTTCAGGTCCGCA +
Preference number: 5 (lower is better)
Translates to: DPSILVFIVHSSVIVLALSSTCF*AVFRSA
Trigger: TGCGGACCTGAAAACGGCCAAGAAGCAGGTGGACGA...CAAAGCCAGAACAATAACTGAAGAATGTACAATAAAAACTAGAATGCTGGGGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp TGCTTTTATTTCACATGTCACATTCGCTCGGGTCCTTTGACTTCGTTACCAGTTCGAAGGTCCCCAGCCTaGATTTTATCTGCTTGGATC +
Preference number: 5 (lower is better)
Translates to: CFYFTCHIRSGPLTSLPVRRSPA*ILSAWI
Trigger: GATCCAAGCAGATAAAATCAAGGCTGGGGACCTTCG...AACTGGTAACGAAGTCAAAGGACCCGAGCGAATGTGACATGTGAAATAAAAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp AATTTTGCCATCTTTGAAGGTTTAGAAGCACTTGTCTTCCTGGGATCTTATCCACTCTTGGCGAGGCACTaGTTCCTTTCCAGGAGAGGT +
Preference number: 5 (lower is better)
Translates to: NFAIFEGLEALVFLGSYPLLARH*FLSRRG
Trigger: ACCTCTCCTGGAAAGGAACAAGTGCCTCGCCAAGAG...TGGATAAGATCCCAGGAAGACAAGTGCTTCTAAACCTTCAAAGATGGCAAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333010.6
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp TTAATGACTGGCTCTCCTGTGGTAAAAGTGGGGTTCTGTATGATGGCATGCATAGAGGGCATATGCTCTTaGGAGGGCCTGATATTCTTT +
Preference number: 5 (lower is better)
Translates to: LMTGSPVVKVGFCMMACIEGICS*EGLIFF
Trigger: AAAGAATATCAGGCCCTCCAAAGAGCATATGCCCTC...TATGCATGCCATCATACAGAACCCCACTTTTACCACAGGAGAGCCAGTCATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp TCAAGTTGGCTAGTGTTGGGTCACCAACACTGTAGAGGCACCCTCTTTCACATTTCCAGGTCTTCAATTTaGGCTTTATACCTTAGCACC +
Preference number: 5 (lower is better)
Translates to: SSWLVLGHQHCRGTLFHISRSSI*ALYLST
Trigger: GGTGCTAAGGTATAAAGCCAAAATTGAAGACCTGGA...AATGTGAAAGAGGGTGCCTCTACAGTGTTGGTGACCCAACACTAGCCAACTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp AGGTGTGTGTTGGAGCAGACGGAATATAGATTTACTCATATGGGCCCTGCAACAGCCCAAGACACATCTTaGCTTGATCTGCAGAAACTA +
Preference number: 5 (lower is better)
Translates to: RCVLEQTEYRFTHMGPATAQDTS*LDLQKL
Trigger: TAGTTTCTGCAGATCAAGCAAAGATGTGTCTTGGGC...TGTTGCAGGGCCCATATGAGTAAATCTATATTCCGTCTGCTCCAACACACACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp GGCACAGAGAGGTTAAGTGACTGGGCCAAAGATACCTGGGTCAGCAGTAAATGTTATTTCATTGTAACTTaGGTTCCATGCCCAAGACAC +
Preference number: 5 (lower is better)
Translates to: GTERLSDWAKDTWVSSKCYFIVT*VPCPRH
Trigger: GTGTCTTGGGCATGGAACCAAAGTTACAATGAAATA...ACATTTACTGCTGACCCAGGTATCTTTGGCCCAGTCACTTAACCTCTCTGTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp TCAAGTTGGCTAGTGTTGGGTCACCAACACTGTAGAGGCACCCTCTTTCACATTTGGCAAACCCGACTCTaGGTAGAAATTTACTCATTG +
Preference number: 5 (lower is better)
Translates to: SSWLVLGHQHCRGTLFHIWQTRL*VEIYSL
Trigger: CAATGAGTAAATTTCTACCAAGAGTCGGGTTTGCCA...AATGTGAAAGAGGGTGCCTCTACAGTGTTGGTGACCCAACACTAGCCAACTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp ACTGGCTCTCCTGTGGTAAAAGTGGGGTTCTGTATGATGGCATGCATATGCAATAGTAGAGCTATCTTGTaGCTGTCATCTGTCTGGGAA +
Preference number: 5 (lower is better)
Translates to: TGSPVVKVGFCMMACICNSRAIL*LSSVWE
Trigger: TTCCCAGACAGATGACAGCAACAAGATAGCTCTACT...ATTGCATATGCATGCCATCATACAGAACCCCACTTTTACCACAGGAGAGCCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp TTAAGTGACTGGGCCAAAGATACCTGGGTCAGCAGTAAATGTAAGAACAAAAAGAGGCAGGAGAATCACTaGAATCCAGGAGGTGGAGCT +
Preference number: 5 (lower is better)
Translates to: LSDWAKDTWVSSKCKNKKRQENH*NPGGGA
Trigger: AGCTCCACCTCCTGGATTCAAGTGATTCTCCTGCCT...CTTTTTGTTCTTACATTTACTGCTGACCCAGGTATCTTTGGCCCAGTCACTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp ATGAATGAGATCAGTCCATTGTTGATAGAGGAATGCAGATGTGAGAGTAGGACAAGGCAGGAGAATCACTaGAATCCAGGAGGTGGAGCT +
Preference number: 5 (lower is better)
Translates to: MNEISPLLIEECRCESRTRQENH*NPGGGA
Trigger: AGCTCCACCTCCTGGATTCAAGTGATTCTCCTGCCT...TGTCCTACTCTCACATCTGCATTCCTCTATCAACAATGGACTGATCTCATTCAT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp TCAAGTTGGCTAGTGTTGGGTCACCAACACTGTAGAGGCACCCTCTTTCACATTCCTCTTTCACATTTCTaGCCTAATGAGCATATGGCT +
Preference number: 5 (lower is better)
Translates to: SSWLVLGHQHCRGTLFHIPLSHF*PNEHMA
Trigger: AGCCATATGCTCATTAGGCAAGAAATGTGAAAGAGG...AATGTGAAAGAGGGTGCCTCTACAGTGTTGGTGACCCAACACTAGCCAACTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp ACTGGCTCTCCTGTGGTAAAAGTGGGGTTCTGTATGATGGCATGCATATGCAATAAACAAGCAAACCTTTaGCCTGGCCCTAAACACATC +
Preference number: 5 (lower is better)
Translates to: TGSPVVKVGFCMMACICNKQANL*PGPKHI
Trigger: GATGTGTTTAGGGCCAGGCAAAAGGTTTGCTTGTTT...ATTGCATATGCATGCCATCATACAGAACCCCACTTTTACCACAGGAGAGCCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS TCA 90 bp CCTCCCGTCTGCTCCTGTAGGAGGGCATATGCTCTTTGGAGGGCCTaGTATTCTTTTGTTAATTGTCGAAATCTTAGTTCAGATTCTTCA +
Preference number: 5 (lower is better)
Translates to: PPVCSCRRAYALWRA*YSFVNCRNLSSDSS
Trigger: TGAAGAATCTGAACTAAGATTTCGACAATTAACAAAAGAATATCAGGCCCTCCAAAGAGCATATGCCCTCCTACAGGAGCAGACGGGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265272.9
ENST00000333010.6
ENST00000504845.1
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp TTAAGTGACTGGGCCAAAGATACCTGGGTCAGCAGTAAATGTAAGAACAAAAAGGTCTTCATTGGCAGCTaGAAGGGCAACAATGAGTGC +
Preference number: 5 (lower is better)
Translates to: LSDWAKDTWVSSKCKNKKVFIGS*KGNNEC
Trigger: GCACTCATTGTTGCCCTTCAAGCTGCCAATGAAGAC...CTTTTTGTTCTTACATTTACTGCTGACCCAGGTATCTTTGGCCCAGTCACTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp ATGAATGAGATCAGTCCATTGTTGATAGAGGAATGCAGATGTGAGAGTAGGACAGTCTTCATTGGCAGCTaGAAGGGCAACAATGAGTGC +
Preference number: 5 (lower is better)
Translates to: MNEISPLLIEECRCESRTVFIGS*KGNNEC
Trigger: GCACTCATTGTTGCCCTTCAAGCTGCCAATGAAGAC...TGTCCTACTCTCACATCTGCATTCCTCTATCAACAATGGACTGATCTCATTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp AATTTTGCCATCTTTGAAGGTTTAGAAGCACTTGTCTTCCTGGGATCTTATCCACTTCGAGATGGCTTCTaGGTGGGACTGATGCTCACT +
Preference number: 5 (lower is better)
Translates to: NFAIFEGLEALVFLGSYPLRDGF*VGLMLT
Trigger: AGTGAGCATCAGTCCCACCAAGAAGCCATCTCGAAG...TGGATAAGATCCCAGGAAGACAAGTGCTTCTAAACCTTCAAAGATGGCAAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333010.6
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp GAGGCTCATGAGCAAGAGTTGGTAAAAATTACAGTTCAGTCTATAGTCTTGAGACTTCGAGATGGCTTCTaGGTGGGACTGATGCTCACT +
Preference number: 5 (lower is better)
Translates to: EAHEQELVKITVQSIVLRLRDGF*VGLMLT
Trigger: AGTGAGCATCAGTCCCACCAAGAAGCCATCTCGAAG...TCTCAAGACTATAGACTGAACTGTAATTTTTACCAACTCTTGCTCATGAGCCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp ATCCACTCTTTAGTAAGTTCGTGGGATCTTGATTGTGGGCAAAATTGGGCTCAAATCCTGTCCTTGGCTTaGATTTCATCCATCAGCCTC +
Preference number: 5 (lower is better)
Translates to: IHSLVSSWDLDCGQNWAQILSLA*ISSISL
Trigger: GAGGCTGATGGATGAAATCAAAGCCAAGGACAGGAT...TTGAGCCCAATTTTGCCCACAATCAAGATCCCACGAACTTACTAAAGAGTGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616793.5
CDS-3UTR CAA 90 bp GTAAAAGTGGGGTTCTGTATGATGGCATGCATATGCAATCAAGAGAGCTGGGAGAAGATGATCCTGTCCTaGGCTTTGATTTCATCCATC +
Preference number: 5 (lower is better)
Translates to: VKVGFCMMACICNQESWEKMILS*ALISSI
Trigger: GATGGATGAAATCAAAGCCAAGGACAGGATCATCTT...CTCCCAGCTCTCTTGATTGCATATGCATGCCATCATACAGAACCCCACTTTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp TTAAGTGACTGGGCCAAAGATACCTGGGTCAGCAGTAAATGTAAGAACAAAAAGTTGCACTCAGCCTCCTaGACCAGAAAGAGTTGTTCG +
Preference number: 5 (lower is better)
Translates to: LSDWAKDTWVSSKCKNKKLHSAS*TRKSCS
Trigger: CGAACAACTCTTTCTGGTCAAGGAGGCTGAGTGCAA...CTTTTTGTTCTTACATTTACTGCTGACCCAGGTATCTTTGGCCCAGTCACTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp AAGGAAGCATCGAATCTGCTTTTATTTCACATGTCACATTCGCTCGGGTCCTTTCTGGAATTTCTCGTTTaGGGCTGCTCATGTTGCACT +
Preference number: 5 (lower is better)
Translates to: KEASNLLLFHMSHSLGSFLEFLV*GCSCCT
Trigger: AGTGCAACATGAGCAGCCCAAAACGAGAAATTCCAG...AAAGGACCCGAGCGAATGTGACATGTGAAATAAAAGCAGATTCGATGCTTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp ATGAATGAGATCAGTCCATTGTTGATAGAGGAATGCAGATGTGAGAGTAGGACACAGGAGAGGTTTACATaGCTTTTCGGTTTCCCGCAC +
Preference number: 5 (lower is better)
Translates to: MNEISPLLIEECRCESRTQERFT*LFGFPH
Trigger: GTGCGGGAAACCGAAAAGCAATGTAAACCTCTCCTG...TGTCCTACTCTCACATCTGCATTCCTCTATCAACAATGGACTGATCTCATTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp GACCCCAGCATTCTAGTTTTTATTGTACATTCTTCAGTTATTGTTCTGGCTTTGCTCTTGGCGAGGCACTaGTTCCTTTCCAGGAGAGGT +
Preference number: 5 (lower is better)
Translates to: DPSILVFIVHSSVIVLALLLARH*FLSRRG
Trigger: ACCTCTCCTGGAAAGGAACAAGTGCCTCGCCAAGAG...CAAAGCCAGAACAATAACTGAAGAATGTACAATAAAAACTAGAATGCTGGGGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp TGCTTTTATTTCACATGTCACATTCGCTCGGGTCCTTTGACTTCGTTACCAGTTAGTTCATCGTTTCTCTaGGCGAGGCACTTGTTCCTT +
Preference number: 5 (lower is better)
Translates to: CFYFTCHIRSGPLTSLPVSSSFL*ARHLFL
Trigger: AAGGAACAAGTGCCTCGCCAAGAGAAACGATGAACT...AACTGGTAACGAAGTCAAAGGACCCGAGCGAATGTGACATGTGAAATAAAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp GTAAAAGTGGGGTTCTGTATGATGGCATGCATATGCAATCAAGAGAGCTGGGAGTTGTTCTTCATTAGCTaGGTCGAGGTCATTCAGAGA +
Preference number: 5 (lower is better)
Translates to: VKVGFCMMACICNQESWELFFIS*VEVIQR
Trigger: TCTCTGAATGACCTCGACCAAGCTAATGAAGAACAA...CTCCCAGCTCTCTTGATTGCATATGCATGCCATCATACAGAACCCCACTTTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp GAGGCTCATGAGCAAGAGTTGGTAAAAATTACAGTTCAGTCTATAGTCTTGAGATGCTTGGAGCTGTTCTaGAGCCTTGGCTTCTCGTTC +
Preference number: 5 (lower is better)
Translates to: EAHEQELVKITVQSIVLRCLELF*SLGFSF
Trigger: GAACGAGAAGCCAAGGCTCAAGAACAGCTCCAAGCA...TCTCAAGACTATAGACTGAACTGTAATTTTTACCAACTCTTGCTCATGAGCCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp ACTGGCTCTCCTGTGGTAAAAGTGGGGTTCTGTATGATGGCATGCATATGCAATTCCAGGTCTTCAATTTaGGCTTTATACCTTAGCACC +
Preference number: 5 (lower is better)
Translates to: TGSPVVKVGFCMMACICNSRSSI*ALYLST
Trigger: GGTGCTAAGGTATAAAGCCAAAATTGAAGACCTGGA...ATTGCATATGCATGCCATCATACAGAACCCCACTTTTACCACAGGAGAGCCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp ACTGGCTCTCCTGTGGTAAAAGTGGGGTTCTGTATGATGGCATGCATATGCAATGAGATCAGTCCATTGTaGATAGAGGAATGCAGATGT +
Preference number: 5 (lower is better)
Translates to: TGSPVVKVGFCMMACICNEISPL*IEECRC
Trigger: ACATCTGCATTCCTCTATCAACAATGGACTGATCTC...ATTGCATATGCATGCCATCATACAGAACCCCACTTTTACCACAGGAGAGCCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp ACTGGCTCTCCTGTGGTAAAAGTGGGGTTCTGTATGATGGCATGCATATGCAATAAAAGTAGAGCTATCTaGTTGCTGTCATCTGTCTGG +
Preference number: 5 (lower is better)
Translates to: TGSPVVKVGFCMMACICNKSRAI*LLSSVW
Trigger: CCAGACAGATGACAGCAACAAGATAGCTCTACTTTT...ATTGCATATGCATGCCATCATACAGAACCCCACTTTTACCACAGGAGAGCCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp TCAAGTTGGCTAGTGTTGGGTCACCAACACTGTAGAGGCACCCTCTTTCACATTGTTATTGTTCTGGCTTaGCAAATGCCAGTGCTAAAA +
Preference number: 5 (lower is better)
Translates to: SSWLVLGHQHCRGTLFHIVIVLA*QMPVLK
Trigger: TTTTAGCACTGGCATTTGCAAAGCCAGAACAATAAC...AATGTGAAAGAGGGTGCCTCTACAGTGTTGGTGACCCAACACTAGCCAACTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp GGCACAGAGAGGTTAAGTGACTGGGCCAAAGATACCTGGGTCAGCAGTAAATGTTACATTCTTCAGTTATaGTTCTGGCTTTGCAAATGC +
Preference number: 5 (lower is better)
Translates to: GTERLSDWAKDTWVSSKCYILQL*FWLCKC
Trigger: GCATTTGCAAAGCCAGAACAATAACTGAAGAATGTA...ACATTTACTGCTGACCCAGGTATCTTTGGCCCAGTCACTTAACCTCTCTGTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp TGCTTTTATTTCACATGTCACATTCGCTCGGGTCCTTTGACTTCGTTACCAGTTGAAGGAAGGTGTGTGTaGGAGCAGACGGAATATAGA +
Preference number: 5 (lower is better)
Translates to: CFYFTCHIRSGPLTSLPVEGRCV*EQTEYR
Trigger: TCTATATTCCGTCTGCTCCAACACACACCTTCCTTC...AACTGGTAACGAAGTCAAAGGACCCGAGCGAATGTGACATGTGAAATAAAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp GGCACAGAGAGGTTAAGTGACTGGGCCAAAGATACCTGGGTCAGCAGTAAATGTAAGGATATATTCATTTaGAGGCTCATGAGCAAGAGT +
Preference number: 5 (lower is better)
Translates to: GTERLSDWAKDTWVSSKCKDIFI*RLMSKS
Trigger: ACTCTTGCTCATGAGCCTCAAAATGAATATATCCTT...ACATTTACTGCTGACCCAGGTATCTTTGGCCCAGTCACTTAACCTCTCTGTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp AGGTGTGTGTTGGAGCAGACGGAATATAGATTTACTCATATGGGCCCTGCAACAAATAGAATTTGGCACTaGAAGAGGCCTTACAGGGAT +
Preference number: 5 (lower is better)
Translates to: RCVLEQTEYRFTHMGPATNRIWH*KRPYRD
Trigger: ATCCCTGTAAGGCCTCTTCAAGTGCCAAATTCTATT...TGTTGCAGGGCCCATATGAGTAAATCTATATTCCGTCTGCTCCAACACACACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616793.5
CDS GCA 90 bp GATTCTTCAGCTGCTAAACTCTTAATTGGCTTGGAACTTCTTCTATaGTTTCTTCTACGGATGAGCTTTTCTCGGTCCCTTGTGAGCTCA +
Preference number: 5 (lower is better)
Translates to: DSSAAKLLIGLELLL*FLLRMSFSRSLVSS
Trigger: TGAGCTCACAAGGGACCGAGAAAAGCTCATCCGTAGAAGAAAGCATAGAAGAAGTTCCAAGCCAATTAAGAGTTTAGCAGCTGAAGAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504845.1
CDS-3UTR CAA 90 bp TTAATGACTGGCTCTCCTGTGGTAAAAGTGGGGTTCTGTATGATGGCATGCATAGCCCTTTCTTGGACATaGTTCCTTTCTAAATGGAGT +
Preference number: 5 (lower is better)
Translates to: LMTGSPVVKVGFCMMACIALSWT*FLSKWS
Trigger: ACTCCATTTAGAAAGGAACAATGTCCAAGAAAGGGC...TATGCATGCCATCATACAGAACCCCACTTTTACCACAGGAGAGCCAGTCATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp AGCATATATTGTAGATTTTCAACAGGGTTGTGTAGGAACTGTCAAGTAAGAAACGCACAGAGAGCAGACTaGAGCCTCTGGATCTCTCCA +
Preference number: 5 (lower is better)
Translates to: SIYCRFSTGLCRNCQVRNAQRAD*SLWISP
Trigger: TGGAGAGATCCAGAGGCTCAAGTCTGCTCTCTGTGC...GTTTCTTACTTGACAGTTCCTACACAACCCTGTTGAAAATCTACAATATATGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265272.9
ENST00000333010.6
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp GTCTTCCTGGGATCTTATCCATGTTTTCGGTTACTCTTTAAGAGGCACCTTGACAAGATGATCCTGTCCTaGGCTTTGATTTCATCCATC +
Preference number: 5 (lower is better)
Translates to: VFLGSYPCFRLLFKRHLDKMILS*ALISSI
Trigger: GATGGATGAAATCAAAGCCAAGGACAGGATCATCTT...GTCAAGGTGCCTCTTAAAGAGTAACCGAAAACATGGATAAGATCCCAGGAAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333010.6
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp GAGGCTCATGAGCAAGAGTTGGTAAAAATTACAGTTCAGTCTATAGTCTTGAGATTGCACTCAGCCTCCTaGACCAGAAAGAGTTGTTCG +
Preference number: 5 (lower is better)
Translates to: EAHEQELVKITVQSIVLRLHSAS*TRKSCS
Trigger: CGAACAACTCTTTCTGGTCAAGGAGGCTGAGTGCAA...TCTCAAGACTATAGACTGAACTGTAATTTTTACCAACTCTTGCTCATGAGCCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp TTCAGGAACATACATTTGCTCTCAGAGATGACTCCAAGACTCAGTAATACACAACAGGAGAGGTTTACATaGCTTTTCGGTTTCCCGCAC +
Preference number: 5 (lower is better)
Translates to: FRNIHLLSEMTPRLSNTQQERFT*LFGFPH
Trigger: GTGCGGGAAACCGAAAAGCAATGTAAACCTCTCCTG...TTGTGTATTACTGAGTCTTGGAGTCATCTCTGAGAGCAAATGTATGTTCCTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp TTAAGTGACTGGGCCAAAGATACCTGGGTCAGCAGTAAATGTAAGAACAAAAAGAGTTCATCGTTTCTCTaGGCGAGGCACTTGTTCCTT +
Preference number: 5 (lower is better)
Translates to: LSDWAKDTWVSSKCKNKKSSSFL*ARHLFL
Trigger: AAGGAACAAGTGCCTCGCCAAGAGAAACGATGAACT...CTTTTTGTTCTTACATTTACTGCTGACCCAGGTATCTTTGGCCCAGTCACTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp TTAATGACTGGCTCTCCTGTGGTAAAAGTGGGGTTCTGTATGATGGCATGCATATTGTTCTTCATTAGCTaGGTCGAGGTCATTCAGAGA +
Preference number: 5 (lower is better)
Translates to: LMTGSPVVKVGFCMMACILFFIS*VEVIQR
Trigger: TCTCTGAATGACCTCGACCAAGCTAATGAAGAACAA...TATGCATGCCATCATACAGAACCCCACTTTTACCACAGGAGAGCCAGTCATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp ATGAATGAGATCAGTCCATTGTTGATAGAGGAATGCAGATGTGAGAGTAGGACAGAGGGCATATGCTCTTaGGAGGGCCTGATATTCTTT +
Preference number: 5 (lower is better)
Translates to: MNEISPLLIEECRCESRTEGICS*EGLIFF
Trigger: AAAGAATATCAGGCCCTCCAAAGAGCATATGCCCTC...TGTCCTACTCTCACATCTGCATTCCTCTATCAACAATGGACTGATCTCATTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp GACCCCAGCATTCTAGTTTTTATTGTACATTCTTCAGTTATTGTTCTGGCTTTGTGCTTGGAGCTGTTCTaGAGCCTTGGCTTCTCGTTC +
Preference number: 5 (lower is better)
Translates to: DPSILVFIVHSSVIVLALCLELF*SLGFSF
Trigger: GAACGAGAAGCCAAGGCTCAAGAACAGCTCCAAGCA...CAAAGCCAGAACAATAACTGAAGAATGTACAATAAAAACTAGAATGCTGGGGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp GTCTTCCTGGGATCTTATCCATGTTTTCGGTTACTCTTTAAGAGGCACCTTGACTCCAGGTCTTCAATTTaGGCTTTATACCTTAGCACC +
Preference number: 5 (lower is better)
Translates to: VFLGSYPCFRLLFKRHLDSRSSI*ALYLST
Trigger: GGTGCTAAGGTATAAAGCCAAAATTGAAGACCTGGA...GTCAAGGTGCCTCTTAAAGAGTAACCGAAAACATGGATAAGATCCCAGGAAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333010.6
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp TCAAGTTGGCTAGTGTTGGGTCACCAACACTGTAGAGGCACCCTCTTTCACATTGATTCTCATATATGCTaGGTCAAGAGCTTGTTTTCT +
Preference number: 5 (lower is better)
Translates to: SSWLVLGHQHCRGTLFHIDSHIC*VKSLFS
Trigger: AGAAAACAAGCTCTTGACCAAGCATATATGAGAATC...AATGTGAAAGAGGGTGCCTCTACAGTGTTGGTGACCCAACACTAGCCAACTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp AAGGAAGCATCGAATCTGCTTTTATTTCACATGTCACATTCGCTCGGGTCCTTTGCCCAAGACACATCTTaGCTTGATCTGCAGAAACTA +
Preference number: 5 (lower is better)
Translates to: KEASNLLLFHMSHSLGSFAQDTS*LDLQKL
Trigger: TAGTTTCTGCAGATCAAGCAAAGATGTGTCTTGGGC...AAAGGACCCGAGCGAATGTGACATGTGAAATAAAAGCAGATTCGATGCTTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp TTAAGTGACTGGGCCAAAGATACCTGGGTCAGCAGTAAATGTAAGAACAAAAAGATTCGCTCGGGTCCTTaGACTTCGTTACCAGTTTTG +
Preference number: 5 (lower is better)
Translates to: LSDWAKDTWVSSKCKNKKIRSGP*TSLPVL
Trigger: CAAAACTGGTAACGAAGTCAAAGGACCCGAGCGAAT...CTTTTTGTTCTTACATTTACTGCTGACCCAGGTATCTTTGGCCCAGTCACTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp TTAATGACTGGCTCTCCTGTGGTAAAAGTGGGGTTCTGTATGATGGCATGCATAGAGATCAGTCCATTGTaGATAGAGGAATGCAGATGT +
Preference number: 5 (lower is better)
Translates to: LMTGSPVVKVGFCMMACIEISPL*IEECRC
Trigger: ACATCTGCATTCCTCTATCAACAATGGACTGATCTC...TATGCATGCCATCATACAGAACCCCACTTTTACCACAGGAGAGCCAGTCATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp GTAAAAGTGGGGTTCTGTATGATGGCATGCATATGCAATCAAGAGAGCTGGGAGAATGAGATCAGTCCATaGTTGATAGAGGAATGCAGA +
Preference number: 5 (lower is better)
Translates to: VKVGFCMMACICNQESWENEISP*LIEECR
Trigger: TCTGCATTCCTCTATCAACAATGGACTGATCTCATT...CTCCCAGCTCTCTTGATTGCATATGCATGCCATCATACAGAACCCCACTTTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp TTAATGACTGGCTCTCCTGTGGTAAAAGTGGGGTTCTGTATGATGGCATGCATATGGCAAACCCGACTCTaGGTAGAAATTTACTCATTG +
Preference number: 5 (lower is better)
Translates to: LMTGSPVVKVGFCMMACIWQTRL*VEIYSL
Trigger: CAATGAGTAAATTTCTACCAAGAGTCGGGTTTGCCA...TATGCATGCCATCATACAGAACCCCACTTTTACCACAGGAGAGCCAGTCATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp ACTGGCTCTCCTGTGGTAAAAGTGGGGTTCTGTATGATGGCATGCATATGCAATGTTATTGTTCTGGCTTaGCAAATGCCAGTGCTAAAA +
Preference number: 5 (lower is better)
Translates to: TGSPVVKVGFCMMACICNVIVLA*QMPVLK
Trigger: TTTTAGCACTGGCATTTGCAAAGCCAGAACAATAAC...ATTGCATATGCATGCCATCATACAGAACCCCACTTTTACCACAGGAGAGCCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp ATGAATGAGATCAGTCCATTGTTGATAGAGGAATGCAGATGTGAGAGTAGGACAGTTTGCTCCAAGCCTTaGTTTAATGACTGGCTCTCC +
Preference number: 5 (lower is better)
Translates to: MNEISPLLIEECRCESRTVCSKP*FNDWLS
Trigger: GGAGAGCCAGTCATTAAACAAAGGCTTGGAGCAAAC...TGTCCTACTCTCACATCTGCATTCCTCTATCAACAATGGACTGATCTCATTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp TTAAGTGACTGGGCCAAAGATACCTGGGTCAGCAGTAAATGTAAGAACAAAAAGCCTCATTGTGGGAAGTaGCTATGGTTAATGGCTGGT +
Preference number: 5 (lower is better)
Translates to: LSDWAKDTWVSSKCKNKKPHCGK*LWLMAG
Trigger: ACCAGCCATTAACCATAGCAACTTCCCACAATGAGG...CTTTTTGTTCTTACATTTACTGCTGACCCAGGTATCTTTGGCCCAGTCACTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616793.5
CDS-3UTR CAA 90 bp AGGTGTGTGTTGGAGCAGACGGAATATAGATTTACTCATATGGGCCCTGCAACAACATTAGCTCTATACTaGAGTCCCCAAAGTATTGGA +
Preference number: 5 (lower is better)
Translates to: RCVLEQTEYRFTHMGPATTLALY*SPQSIG
Trigger: TCCAATACTTTGGGGACTCAAGTATAGAGCTAATGT...TGTTGCAGGGCCCATATGAGTAAATCTATATTCCGTCTGCTCCAACACACACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616793.5
CDS CCA 90 bp TCTCGCCCTTATTTCGCCCTTTCTTGGACATTGTTCCTTTCTAAATaGAGTCTGTTGGTTTTTAATTTCTTTCAAGCAGGTGCTGCCATG +
Preference number: 5 (lower is better)
Translates to: SRPYFALSWTLFLSK*SLLVFNFFQAGAAM
Trigger: CATGGCAGCACCTGCTTGAAAGAAATTAAAAACCAACAGACTCCATTTAGAAAGGAACAATGTCCAAGAAAGGGCGAAATAAGGGCGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp AAGGAAGCATCGAATCTGCTTTTATTTCACATGTCACATTCGCTCGGGTCCTTTGCCCTTTCTTGGACATaGTTCCTTTCTAAATGGAGT +
Preference number: 5 (lower is better)
Translates to: KEASNLLLFHMSHSLGSFALSWT*FLSKWS
Trigger: ACTCCATTTAGAAAGGAACAATGTCCAAGAAAGGGC...AAAGGACCCGAGCGAATGTGACATGTGAAATAAAAGCAGATTCGATGCTTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp TGCTTTTATTTCACATGTCACATTCGCTCGGGTCCTTTGACTTCGTTACCAGTTTACCTTGGACTTCTCTaGATGCAGCTCTATCTGAAT +
Preference number: 5 (lower is better)
Translates to: CFYFTCHIRSGPLTSLPVYLGLL*MQLYLN
Trigger: ATTCAGATAGAGCTGCATCAAGAGAAGTCCAAGGTA...AACTGGTAACGAAGTCAAAGGACCCGAGCGAATGTGACATGTGAAATAAAAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp AGCATATATTGTAGATTTTCAACAGGGTTGTGTAGGAACTGTCAAGTAAGAAACTCATGGAGCTTGGCTTaGAGTTCTGTCACCAGCACC +
Preference number: 5 (lower is better)
Translates to: SIYCRFSTGLCRNCQVRNSWSLA*SSVTST
Trigger: GGTGCTGGTGACAGAACTCAAAGCCAAGCTCCATGA...GTTTCTTACTTGACAGTTCCTACACAACCCTGTTGAAAATCTACAATATATGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265272.9
ENST00000333010.6
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp AGCATATATTGTAGATTTTCAACAGGGTTGTGTAGGAACTGTCAAGTAAGAAACTCCTGCTCGTGCTGCTaGATAAGGTTCTCCCTCACA +
Preference number: 5 (lower is better)
Translates to: SIYCRFSTGLCRNCQVRNSCSCC*IRFSLT
Trigger: TGTGAGGGAGAACCTTATCAAGCAGCACGAGCAGGA...GTTTCTTACTTGACAGTTCCTACACAACCCTGTTGAAAATCTACAATATATGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265272.9
ENST00000333010.6
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp AGCATATATTGTAGATTTTCAACAGGGTTGTGTAGGAACTGTCAAGTAAGAAACGTACCTTCACCGTCCTaGACATTTCCTGCTCGTGCT +
Preference number: 5 (lower is better)
Translates to: SIYCRFSTGLCRNCQVRNVPSPS*TFPARA
Trigger: AGCACGAGCAGGAAATGTCAAGGACGGTGAAGGTAC...GTTTCTTACTTGACAGTTCCTACACAACCCTGTTGAAAATCTACAATATATGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265272.9
ENST00000333010.6
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp AGCATATATTGTAGATTTTCAACAGGGTTGTGTAGGAACTGTCAAGTAAGAAACTCTGCTTGGATCATATaGCTCAGAGCCTCGTCCACC +
Preference number: 5 (lower is better)
Translates to: SIYCRFSTGLCRNCQVRNSAWII*LRASST
Trigger: GGTGGACGAGGCTCTGAGCAATATGATCCAAGCAGA...GTTTCTTACTTGACAGTTCCTACACAACCCTGTTGAAAATCTACAATATATGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265272.9
ENST00000333010.6
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp CAAACTTTATTTCTCCTATTACTAGTGGAGAACACATTTGCTCTCTACCTAAGTTCTGCTTGGATCATATaGCTCAGAGCCTCGTCCACC +
Preference number: 5 (lower is better)
Translates to: QTLFLLLLVENTFALYLSSAWII*LRASST
Trigger: GGTGGACGAGGCTCTGAGCAATATGATCCAAGCAGA...ACTTAGGTAGAGAGCAAATGTGTTCTCCACTAGTAATAGGAGAAATAAAGTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616793.5
CDS-3UTR CAA 90 bp GTCTTCCTGGGATCTTATCCATGTTTTCGGTTACTCTTTAAGAGGCACCTTGACCTTGATTTTATCTGCTaGGATCATATTGCTCAGAGC +
Preference number: 5 (lower is better)
Translates to: VFLGSYPCFRLLFKRHLDLDFIC*DHIAQS
Trigger: GCTCTGAGCAATATGATCCAAGCAGATAAAATCAAG...GTCAAGGTGCCTCTTAAAGAGTAACCGAAAACATGGATAAGATCCCAGGAAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333010.6
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp AATTTTGCCATCTTTGAAGGTTTAGAAGCACTTGTCTTCCTGGGATCTTATCCACTGGAATTTCTCGTTTaGGGCTGCTCATGTTGCACT +
Preference number: 5 (lower is better)
Translates to: NFAIFEGLEALVFLGSYPLEFLV*GCSCCT
Trigger: AGTGCAACATGAGCAGCCCAAAACGAGAAATTCCAG...TGGATAAGATCCCAGGAAGACAAGTGCTTCTAAACCTTCAAAGATGGCAAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333010.6
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp GACCCCAGCATTCTAGTTTTTATTGTACATTCTTCAGTTATTGTTCTGGCTTTGCAGGAGAGGTTTACATaGCTTTTCGGTTTCCCGCAC +
Preference number: 5 (lower is better)
Translates to: DPSILVFIVHSSVIVLALQERFT*LFGFPH
Trigger: GTGCGGGAAACCGAAAAGCAATGTAAACCTCTCCTG...CAAAGCCAGAACAATAACTGAAGAATGTACAATAAAAACTAGAATGCTGGGGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp TTCAGGAACATACATTTGCTCTCAGAGATGACTCCAAGACTCAGTAATACACAAAGTTCATCGTTTCTCTaGGCGAGGCACTTGTTCCTT +
Preference number: 5 (lower is better)
Translates to: FRNIHLLSEMTPRLSNTQSSSFL*ARHLFL
Trigger: AAGGAACAAGTGCCTCGCCAAGAGAAACGATGAACT...TTGTGTATTACTGAGTCTTGGAGTCATCTCTGAGAGCAAATGTATGTTCCTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp AATTTTGCCATCTTTGAAGGTTTAGAAGCACTTGTCTTCCTGGGATCTTATCCAAGTTCATCGTTTCTCTaGGCGAGGCACTTGTTCCTT +
Preference number: 5 (lower is better)
Translates to: NFAIFEGLEALVFLGSYPSSSFL*ARHLFL
Trigger: AAGGAACAAGTGCCTCGCCAAGAGAAACGATGAACT...TGGATAAGATCCCAGGAAGACAAGTGCTTCTAAACCTTCAAAGATGGCAAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333010.6
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp AATTTTGCCATCTTTGAAGGTTTAGAAGCACTTGTCTTCCTGGGATCTTATCCAGAGGGCATATGCTCTTaGGAGGGCCTGATATTCTTT +
Preference number: 5 (lower is better)
Translates to: NFAIFEGLEALVFLGSYPEGICS*EGLIFF
Trigger: AAAGAATATCAGGCCCTCCAAAGAGCATATGCCCTC...TGGATAAGATCCCAGGAAGACAAGTGCTTCTAAACCTTCAAAGATGGCAAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333010.6
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp AGCATATATTGTAGATTTTCAACAGGGTTGTGTAGGAACTGTCAAGTAAGAAACTGCTTGGAGCTGTTCTaGAGCCTTGGCTTCTCGTTC +
Preference number: 5 (lower is better)
Translates to: SIYCRFSTGLCRNCQVRNCLELF*SLGFSF
Trigger: GAACGAGAAGCCAAGGCTCAAGAACAGCTCCAAGCA...GTTTCTTACTTGACAGTTCCTACACAACCCTGTTGAAAATCTACAATATATGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265272.9
ENST00000333010.6
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp GTAAAAGTGGGGTTCTGTATGATGGCATGCATATGCAATCAAGAGAGCTGGGAGGATTCTCATATATGCTaGGTCAAGAGCTTGTTTTCT +
Preference number: 5 (lower is better)
Translates to: VKVGFCMMACICNQESWEDSHIC*VKSLFS
Trigger: AGAAAACAAGCTCTTGACCAAGCATATATGAGAATC...CTCCCAGCTCTCTTGATTGCATATGCATGCCATCATACAGAACCCCACTTTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp AGGTGTGTGTTGGAGCAGACGGAATATAGATTTACTCATATGGGCCCTGCAACAGATTCTCATATATGCTaGGTCAAGAGCTTGTTTTCT +
Preference number: 5 (lower is better)
Translates to: RCVLEQTEYRFTHMGPATDSHIC*VKSLFS
Trigger: AGAAAACAAGCTCTTGACCAAGCATATATGAGAATC...TGTTGCAGGGCCCATATGAGTAAATCTATATTCCGTCTGCTCCAACACACACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp AAGGAAGCATCGAATCTGCTTTTATTTCACATGTCACATTCGCTCGGGTCCTTTGAGATCAGTCCATTGTaGATAGAGGAATGCAGATGT +
Preference number: 5 (lower is better)
Translates to: KEASNLLLFHMSHSLGSFEISPL*IEECRC
Trigger: ACATCTGCATTCCTCTATCAACAATGGACTGATCTC...AAAGGACCCGAGCGAATGTGACATGTGAAATAAAAGCAGATTCGATGCTTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp ATCCACTCTTTAGTAAGTTCGTGGGATCTTGATTGTGGGCAAAATTGGGCTCAATGGCAAACCCGACTCTaGGTAGAAATTTACTCATTG +
Preference number: 5 (lower is better)
Translates to: IHSLVSSWDLDCGQNWAQWQTRL*VEIYSL
Trigger: CAATGAGTAAATTTCTACCAAGAGTCGGGTTTGCCA...TTGAGCCCAATTTTGCCCACAATCAAGATCCCACGAACTTACTAAAGAGTGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616793.5
CDS-3UTR CAA 90 bp ATGAATGAGATCAGTCCATTGTTGATAGAGGAATGCAGATGTGAGAGTAGGACAAGTAGAGCTATCTTGTaGCTGTCATCTGTCTGGGAA +
Preference number: 5 (lower is better)
Translates to: MNEISPLLIEECRCESRTSRAIL*LSSVWE
Trigger: TTCCCAGACAGATGACAGCAACAAGATAGCTCTACT...TGTCCTACTCTCACATCTGCATTCCTCTATCAACAATGGACTGATCTCATTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp AGGTGTGTGTTGGAGCAGACGGAATATAGATTTACTCATATGGGCCCTGCAACATACATTCTTCAGTTATaGTTCTGGCTTTGCAAATGC +
Preference number: 5 (lower is better)
Translates to: RCVLEQTEYRFTHMGPATYILQL*FWLCKC
Trigger: GCATTTGCAAAGCCAGAACAATAACTGAAGAATGTA...TGTTGCAGGGCCCATATGAGTAAATCTATATTCCGTCTGCTCCAACACACACCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp GAGGCTCATGAGCAAGAGTTGGTAAAAATTACAGTTCAGTCTATAGTCTTGAGAGTTTGCTCCAAGCCTTaGTTTAATGACTGGCTCTCC +
Preference number: 5 (lower is better)
Translates to: EAHEQELVKITVQSIVLRVCSKP*FNDWLS
Trigger: GGAGAGCCAGTCATTAAACAAAGGCTTGGAGCAAAC...TCTCAAGACTATAGACTGAACTGTAATTTTTACCAACTCTTGCTCATGAGCCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp AATTTTGCCATCTTTGAAGGTTTAGAAGCACTTGTCTTCCTGGGATCTTATCCAGTTTGCTCCAAGCCTTaGTTTAATGACTGGCTCTCC +
Preference number: 5 (lower is better)
Translates to: NFAIFEGLEALVFLGSYPVCSKP*FNDWLS
Trigger: GGAGAGCCAGTCATTAAACAAAGGCTTGGAGCAAAC...TGGATAAGATCCCAGGAAGACAAGTGCTTCTAAACCTTCAAAGATGGCAAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp GAGGCTCATGAGCAAGAGTTGGTAAAAATTACAGTTCAGTCTATAGTCTTGAGATCAAGTTGGCTAGTGTaGGGTCACCAACACTGTAGA +
Preference number: 5 (lower is better)
Translates to: EAHEQELVKITVQSIVLRSSWLV*GHQHCR
Trigger: TCTACAGTGTTGGTGACCCAACACTAGCCAACTTGA...TCTCAAGACTATAGACTGAACTGTAATTTTTACCAACTCTTGCTCATGAGCCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp AGGTGTGTGTTGGAGCAGACGGAATATAGATTTACTCATATGGGCCCTGCAACAGTTCAGTCTATAGTCTaGAGAAATTTGCTAATCTCC +
Preference number: 5 (lower is better)
Translates to: RCVLEQTEYRFTHMGPATVQSIV*RNLLIS
Trigger: GGAGATTAGCAAATTTCTCAAGACTATAGACTGAAC...TGTTGCAGGGCCCATATGAGTAAATCTATATTCCGTCTGCTCCAACACACACCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp GTAAAAGTGGGGTTCTGTATGATGGCATGCATATGCAATCAAGAGAGCTGGGAGAAGGATATATTCATTTaGAGGCTCATGAGCAAGAGT +
Preference number: 5 (lower is better)
Translates to: VKVGFCMMACICNQESWEKDIFI*RLMSKS
Trigger: ACTCTTGCTCATGAGCCTCAAAATGAATATATCCTT...CTCCCAGCTCTCTTGATTGCATATGCATGCCATCATACAGAACCCCACTTTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp GTAAAAGTGGGGTTCTGTATGATGGCATGCATATGCAATCAAGAGAGCTGGGAGTCACCCTACAGAACTTaGCATATAACAAGGATGAAA +
Preference number: 5 (lower is better)
Translates to: VKVGFCMMACICNQESWESPYRT*HITRMK
Trigger: TTTCATCCTTGTTATATGCAAAGTTCTGTAGGGTGA...CTCCCAGCTCTCTTGATTGCATATGCATGCCATCATACAGAACCCCACTTTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616793.5
CDS-3UTR CAA 90 bp AAGGAAGCATCGAATCTGCTTTTATTTCACATGTCACATTCGCTCGGGTCCTTTTCTCTCTTTCAAGCTTaGATACCTTGGACTTCTCTT +
Preference number: 5 (lower is better)
Translates to: KEASNLLLFHMSHSLGSFSLFQA*IPWTSL
Trigger: AAGAGAAGTCCAAGGTATCAAAGCTTGAAAGAGAGA...AAAGGACCCGAGCGAATGTGACATGTGAAATAAAAGCAGATTCGATGCTTCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp TGCTTTTATTTCACATGTCACATTCGCTCGGGTCCTTTGACTTCGTTACCAGTTTCTCTCTTTCAAGCTTaGATACCTTGGACTTCTCTT +
Preference number: 5 (lower is better)
Translates to: CFYFTCHIRSGPLTSLPVSLFQA*IPWTSL
Trigger: AAGAGAAGTCCAAGGTATCAAAGCTTGAAAGAGAGA...AACTGGTAACGAAGTCAAAGGACCCGAGCGAATGTGACATGTGAAATAAAAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp AAGGAAGCATCGAATCTGCTTTTATTTCACATGTCACATTCGCTCGGGTCCTTTCTTGATTTTATCTGCTaGGATCATATTGCTCAGAGC +
Preference number: 5 (lower is better)
Translates to: KEASNLLLFHMSHSLGSFLDFIC*DHIAQS
Trigger: GCTCTGAGCAATATGATCCAAGCAGATAAAATCAAG...AAAGGACCCGAGCGAATGTGACATGTGAAATAAAAGCAGATTCGATGCTTCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp AGCATATATTGTAGATTTTCAACAGGGTTGTGTAGGAACTGTCAAGTAAGAAACTTGCACTCAGCCTCCTaGACCAGAAAGAGTTGTTCG +
Preference number: 5 (lower is better)
Translates to: SIYCRFSTGLCRNCQVRNLHSAS*TRKSCS
Trigger: CGAACAACTCTTTCTGGTCAAGGAGGCTGAGTGCAA...GTTTCTTACTTGACAGTTCCTACACAACCCTGTTGAAAATCTACAATATATGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265272.9
ENST00000333010.6
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp AGCATATATTGTAGATTTTCAACAGGGTTGTGTAGGAACTGTCAAGTAAGAAACCAGGAGAGGTTTACATaGCTTTTCGGTTTCCCGCAC +
Preference number: 5 (lower is better)
Translates to: SIYCRFSTGLCRNCQVRNQERFT*LFGFPH
Trigger: GTGCGGGAAACCGAAAAGCAATGTAAACCTCTCCTG...GTTTCTTACTTGACAGTTCCTACACAACCCTGTTGAAAATCTACAATATATGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265272.9
ENST00000333010.6
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp TTAAGTGACTGGGCCAAAGATACCTGGGTCAGCAGTAAATGTAAGAACAAAAAGTCCAGGTCTTCAATTTaGGCTTTATACCTTAGCACC +
Preference number: 5 (lower is better)
Translates to: LSDWAKDTWVSSKCKNKKSRSSI*ALYLST
Trigger: GGTGCTAAGGTATAAAGCCAAAATTGAAGACCTGGA...CTTTTTGTTCTTACATTTACTGCTGACCCAGGTATCTTTGGCCCAGTCACTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp AAGGAAGCATCGAATCTGCTTTTATTTCACATGTCACATTCGCTCGGGTCCTTTAGATTTTCAACAGGGTaGTGTAGGAACTGTCAAGTA +
Preference number: 5 (lower is better)
Translates to: KEASNLLLFHMSHSLGSFRFSTG*CRNCQV
Trigger: TACTTGACAGTTCCTACACAACCCTGTTGAAAATCT...AAAGGACCCGAGCGAATGTGACATGTGAAATAAAAGCAGATTCGATGCTTCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp TGCTTTTATTTCACATGTCACATTCGCTCGGGTCCTTTGACTTCGTTACCAGTTAGATTTTCAACAGGGTaGTGTAGGAACTGTCAAGTA +
Preference number: 5 (lower is better)
Translates to: CFYFTCHIRSGPLTSLPVRFSTG*CRNCQV
Trigger: TACTTGACAGTTCCTACACAACCCTGTTGAAAATCT...AACTGGTAACGAAGTCAAAGGACCCGAGCGAATGTGACATGTGAAATAAAAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp TGCTTTTATTTCACATGTCACATTCGCTCGGGTCCTTTGACTTCGTTACCAGTTTATTTCATTGTAACTTaGGTTCCATGCCCAAGACAC +
Preference number: 5 (lower is better)
Translates to: CFYFTCHIRSGPLTSLPVYFIVT*VPCPRH
Trigger: GTGTCTTGGGCATGGAACCAAAGTTACAATGAAATA...AACTGGTAACGAAGTCAAAGGACCCGAGCGAATGTGACATGTGAAATAAAAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp AAGGAAGCATCGAATCTGCTTTTATTTCACATGTCACATTCGCTCGGGTCCTTTAATGAGATCAGTCCATaGTTGATAGAGGAATGCAGA +
Preference number: 5 (lower is better)
Translates to: KEASNLLLFHMSHSLGSFNEISP*LIEECR
Trigger: TCTGCATTCCTCTATCAACAATGGACTGATCTCATT...AAAGGACCCGAGCGAATGTGACATGTGAAATAAAAGCAGATTCGATGCTTCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp TTAATGACTGGCTCTCCTGTGGTAAAAGTGGGGTTCTGTATGATGGCATGCATAGATTCTGCTGTGTTTTaGCCCAAATCATATAGCATA +
Preference number: 5 (lower is better)
Translates to: LMTGSPVVKVGFCMMACIDSAVF*PKSYSI
Trigger: TATGCTATATGATTTGGGCAAAAACACAGCAGAATC...TATGCATGCCATCATACAGAACCCCACTTTTACCACAGGAGAGCCAGTCATTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp GTCTTCCTGGGATCTTATCCATGTTTTCGGTTACTCTTTAAGAGGCACCTTGACGATTCTGCTGTGTTTTaGCCCAAATCATATAGCATA +
Preference number: 5 (lower is better)
Translates to: VFLGSYPCFRLLFKRHLDDSAVF*PKSYSI
Trigger: TATGCTATATGATTTGGGCAAAAACACAGCAGAATC...GTCAAGGTGCCTCTTAAAGAGTAACCGAAAACATGGATAAGATCCCAGGAAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp TTAATGACTGGCTCTCCTGTGGTAAAAGTGGGGTTCTGTATGATGGCATGCATATACATTCTTCAGTTATaGTTCTGGCTTTGCAAATGC +
Preference number: 5 (lower is better)
Translates to: LMTGSPVVKVGFCMMACIYILQL*FWLCKC
Trigger: GCATTTGCAAAGCCAGAACAATAACTGAAGAATGTA...TATGCATGCCATCATACAGAACCCCACTTTTACCACAGGAGAGCCAGTCATTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp AATTTTGCCATCTTTGAAGGTTTAGAAGCACTTGTCTTCCTGGGATCTTATCCAAATGTCCCAAGTAGCTaGATAAGCAAGCTTCAGTGC +
Preference number: 5 (lower is better)
Translates to: NFAIFEGLEALVFLGSYPNVPSS*ISKLQC
Trigger: GCACTGAAGCTTGCTTATCAAGCTACTTGGGACATT...TGGATAAGATCCCAGGAAGACAAGTGCTTCTAAACCTTCAAAGATGGCAAAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp AAGGAAGCATCGAATCTGCTTTTATTTCACATGTCACATTCGCTCGGGTCCTTTGCTCATGAGCAAGAGTaGGTAAAAATTACAGTTCAG +
Preference number: 5 (lower is better)
Translates to: KEASNLLLFHMSHSLGSFAHEQE*VKITVQ
Trigger: CTGAACTGTAATTTTTACCAACTCTTGCTCATGAGC...AAAGGACCCGAGCGAATGTGACATGTGAAATAAAAGCAGATTCGATGCTTCCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp GAGGCTCATGAGCAAGAGTTGGTAAAAATTACAGTTCAGTCTATAGTCTTGAGACTCTACCTTATGGACTaGGGAAGACACATACAACCT +
Preference number: 5 (lower is better)
Translates to: EAHEQELVKITVQSIVLRLYLMD*GRHIQP
Trigger: AGGTTGTATGTGTCTTCCCAAGTCCATAAGGTAGAG...TCTCAAGACTATAGACTGAACTGTAATTTTTACCAACTCTTGCTCATGAGCCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616793.5
CDS-3UTR CAA 90 bp GACCCCAGCATTCTAGTTTTTATTGTACATTCTTCAGTTATTGTTCTGGCTTTGTGCTTAAAGAGGGGCTaGGGTCCATATTGGAAGCAT +
Preference number: 5 (lower is better)
Translates to: DPSILVFIVHSSVIVLALCLKRG*GPYWKH
Trigger: ATGCTTCCAATATGGACCCAAGCCCCTCTTTAAGCA...CAAAGCCAGAACAATAACTGAAGAATGTACAATAAAAACTAGAATGCTGGGGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000616793.5
CDS-3UTR CAA 90 bp GAGGCTCATGAGCAAGAGTTGGTAAAAATTACAGTTCAGTCTATAGTCTTGAGATACCTTGGACTTCTCTaGATGCAGCTCTATCTGAAT +
Preference number: 5 (lower is better)
Translates to: EAHEQELVKITVQSIVLRYLGLL*MQLYLN
Trigger: ATTCAGATAGAGCTGCATCAAGAGAAGTCCAAGGTA...TCTCAAGACTATAGACTGAACTGTAATTTTTACCAACTCTTGCTCATGAGCCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp AGCATATATTGTAGATTTTCAACAGGGTTGTGTAGGAACTGTCAAGTAAGAAACATCCTGTCCTTGGCTTaGATTTCATCCATCAGCCTC +
Preference number: 5 (lower is better)
Translates to: SIYCRFSTGLCRNCQVRNILSLA*ISSISL
Trigger: GAGGCTGATGGATGAAATCAAAGCCAAGGACAGGAT...GTTTCTTACTTGACAGTTCCTACACAACCCTGTTGAAAATCTACAATATATGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265272.9
ENST00000333010.6
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp AGCATATATTGTAGATTTTCAACAGGGTTGTGTAGGAACTGTCAAGTAAGAAACCTTGACCAGAAAGAGTaGTTCGTCCAAAGCCTCCTT +
Preference number: 5 (lower is better)
Translates to: SIYCRFSTGLCRNCQVRNLDQKE*FVQSLL
Trigger: AAGGAGGCTTTGGACGAACAACTCTTTCTGGTCAAG...GTTTCTTACTTGACAGTTCCTACACAACCCTGTTGAAAATCTACAATATATGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265272.9
ENST00000333010.6
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp AATTTTGCCATCTTTGAAGGTTTAGAAGCACTTGTCTTCCTGGGATCTTATCCATTGTTCTTCATTAGCTaGGTCGAGGTCATTCAGAGA +
Preference number: 5 (lower is better)
Translates to: NFAIFEGLEALVFLGSYPLFFIS*VEVIQR
Trigger: TCTCTGAATGACCTCGACCAAGCTAATGAAGAACAA...TGGATAAGATCCCAGGAAGACAAGTGCTTCTAAACCTTCAAAGATGGCAAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333010.6
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp TTAAGTGACTGGGCCAAAGATACCTGGGTCAGCAGTAAATGTAAGAACAAAAAGTATTTCATTGTAACTTaGGTTCCATGCCCAAGACAC +
Preference number: 5 (lower is better)
Translates to: LSDWAKDTWVSSKCKNKKYFIVT*VPCPRH
Trigger: GTGTCTTGGGCATGGAACCAAAGTTACAATGAAATA...CTTTTTGTTCTTACATTTACTGCTGACCCAGGTATCTTTGGCCCAGTCACTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp GACCCCAGCATTCTAGTTTTTATTGTACATTCTTCAGTTATTGTTCTGGCTTTGAAACAAGCAAACCTTTaGCCTGGCCCTAAACACATC +
Preference number: 5 (lower is better)
Translates to: DPSILVFIVHSSVIVLALKQANL*PGPKHI
Trigger: GATGTGTTTAGGGCCAGGCAAAAGGTTTGCTTGTTT...CAAAGCCAGAACAATAACTGAAGAATGTACAATAAAAACTAGAATGCTGGGGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp ATGAATGAGATCAGTCCATTGTTGATAGAGGAATGCAGATGTGAGAGTAGGACAGCTCATGAGCAAGAGTaGGTAAAAATTACAGTTCAG +
Preference number: 5 (lower is better)
Translates to: MNEISPLLIEECRCESRTAHEQE*VKITVQ
Trigger: CTGAACTGTAATTTTTACCAACTCTTGCTCATGAGC...TGTCCTACTCTCACATCTGCATTCCTCTATCAACAATGGACTGATCTCATTCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS CCA 90 bp ATTTCGCCCTTTCTTGGACATTGTTCCTTTCTAAATGGAGTCTGTTaGTTTTTAATTTCTTTCAAGCAGGTGCTGCCATGTTACTGTTTC +
Preference number: 5 (lower is better)
Translates to: ISPFLGHCSFLNGVC*FLISFKQVLPCYCF
Trigger: GAAACAGTAACATGGCAGCACCTGCTTGAAAGAAATTAAAAACCAACAGACTCCATTTAGAAAGGAACAATGTCCAAGAAAGGGCGAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp GACCCCAGCATTCTAGTTTTTATTGTACATTCTTCAGTTATTGTTCTGGCTTTGAAGATGATCCTGTCCTaGGCTTTGATTTCATCCATC +
Preference number: 5 (lower is better)
Translates to: DPSILVFIVHSSVIVLALKMILS*ALISSI
Trigger: GATGGATGAAATCAAAGCCAAGGACAGGATCATCTT...CAAAGCCAGAACAATAACTGAAGAATGTACAATAAAAACTAGAATGCTGGGGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp AATTTTGCCATCTTTGAAGGTTTAGAAGCACTTGTCTTCCTGGGATCTTATCCAAGATTTTCAACAGGGTaGTGTAGGAACTGTCAAGTA +
Preference number: 5 (lower is better)
Translates to: NFAIFEGLEALVFLGSYPRFSTG*CRNCQV
Trigger: TACTTGACAGTTCCTACACAACCCTGTTGAAAATCT...TGGATAAGATCCCAGGAAGACAAGTGCTTCTAAACCTTCAAAGATGGCAAAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333010.6
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp AGCATATATTGTAGATTTTCAACAGGGTTGTGTAGGAACTGTCAAGTAAGAAACAGTAGAGCTATCTTGTaGCTGTCATCTGTCTGGGAA +
Preference number: 5 (lower is better)
Translates to: SIYCRFSTGLCRNCQVRNSRAIL*LSSVWE
Trigger: TTCCCAGACAGATGACAGCAACAAGATAGCTCTACT...GTTTCTTACTTGACAGTTCCTACACAACCCTGTTGAAAATCTACAATATATGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp AATTTTGCCATCTTTGAAGGTTTAGAAGCACTTGTCTTCCTGGGATCTTATCCAGTTATTGTTCTGGCTTaGCAAATGCCAGTGCTAAAA +
Preference number: 5 (lower is better)
Translates to: NFAIFEGLEALVFLGSYPVIVLA*QMPVLK
Trigger: TTTTAGCACTGGCATTTGCAAAGCCAGAACAATAAC...TGGATAAGATCCCAGGAAGACAAGTGCTTCTAAACCTTCAAAGATGGCAAAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp AGCATATATTGTAGATTTTCAACAGGGTTGTGTAGGAACTGTCAAGTAAGAAACAATGTCCCAAGTAGCTaGATAAGCAAGCTTCAGTGC +
Preference number: 5 (lower is better)
Translates to: SIYCRFSTGLCRNCQVRNNVPSS*ISKLQC
Trigger: GCACTGAAGCTTGCTTATCAAGCTACTTGGGACATT...GTTTCTTACTTGACAGTTCCTACACAACCCTGTTGAAAATCTACAATATATGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp TTAAGTGACTGGGCCAAAGATACCTGGGTCAGCAGTAAATGTAAGAACAAAAAGAAGGATATATTCATTTaGAGGCTCATGAGCAAGAGT +
Preference number: 5 (lower is better)
Translates to: LSDWAKDTWVSSKCKNKKKDIFI*RLMSKS
Trigger: ACTCTTGCTCATGAGCCTCAAAATGAATATATCCTT...CTTTTTGTTCTTACATTTACTGCTGACCCAGGTATCTTTGGCCCAGTCACTTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp TTAAGTGACTGGGCCAAAGATACCTGGGTCAGCAGTAAATGTAAGAACAAAAAGGGTTTACAGGAAAATTaGACAGTCAATGGGCAAAAA +
Preference number: 5 (lower is better)
Translates to: LSDWAKDTWVSSKCKNKKGLQEN*TVNGQK
Trigger: TTTTTGCCCATTGACTGTCAAATTTTCCTGTAAACC...CTTTTTGTTCTTACATTTACTGCTGACCCAGGTATCTTTGGCCCAGTCACTTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616793.5
CDS-3UTR CAA 90 bp GAGGCTCATGAGCAAGAGTTGGTAAAAATTACAGTTCAGTCTATAGTCTTGAGACCAAAGTATTGGATCTaGAAGGCTAAAACATGCATG +
Preference number: 5 (lower is better)
Translates to: EAHEQELVKITVQSIVLRPKYWI*KAKTCM
Trigger: CATGCATGTTTTAGCCTTCAAGATCCAATACTTTGG...TCTCAAGACTATAGACTGAACTGTAATTTTTACCAACTCTTGCTCATGAGCCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616793.5
CDS-3UTR CAA 90 bp TTCAGGAACATACATTTGCTCTCAGAGATGACTCCAAGACTCAGTAATACACAAGTTCAGTCTATAGTCTaGAGAAATTTGCTAATCTCC +
Preference number: 5 (lower is better)
Translates to: FRNIHLLSEMTPRLSNTQVQSIV*RNLLIS
Trigger: GGAGATTAGCAAATTTCTCAAGACTATAGACTGAAC...TTGTGTATTACTGAGTCTTGGAGTCATCTCTGAGAGCAAATGTATGTTCCTGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp GAGGCTCATGAGCAAGAGTTGGTAAAAATTACAGTTCAGTCTATAGTCTTGAGAGTTCAGTCTATAGTCTaGAGAAATTTGCTAATCTCC +
Preference number: 5 (lower is better)
Translates to: EAHEQELVKITVQSIVLRVQSIV*RNLLIS
Trigger: GGAGATTAGCAAATTTCTCAAGACTATAGACTGAAC...TCTCAAGACTATAGACTGAACTGTAATTTTTACCAACTCTTGCTCATGAGCCTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp GACCCCAGCATTCTAGTTTTTATTGTACATTCTTCAGTTATTGTTCTGGCTTTGAGTCAAATAGAAGTGTaGTTACTAACAGATGCTGGG +
Preference number: 5 (lower is better)
Translates to: DPSILVFIVHSSVIVLALSQIEV*LLTDAG
Trigger: CCCAGCATCTGTTAGTAACAACACTTCTATTTGACT...CAAAGCCAGAACAATAACTGAAGAATGTACAATAAAAACTAGAATGCTGGGGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616793.5
CDS-3UTR CAA 90 bp AATTTTGCCATCTTTGAAGGTTTAGAAGCACTTGTCTTCCTGGGATCTTATCCAAAAAATGTTTGGATTTaGATCTGCCTCATTGTGGGA +
Preference number: 5 (lower is better)
Translates to: NFAIFEGLEALVFLGSYPKNVWI*ICLIVG
Trigger: TCCCACAATGAGGCAGATCAAAATCCAAACATTTTT...TGGATAAGATCCCAGGAAGACAAGTGCTTCTAAACCTTCAAAGATGGCAAAATT
38% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000616793.5
CDS-3UTR CAA 90 bp AGCATATATTGTAGATTTTCAACAGGGTTGTGTAGGAACTGTCAAGTAAGAAACTCTCTCTTTCAAGCTTaGATACCTTGGACTTCTCTT +
Preference number: 5 (lower is better)
Translates to: SIYCRFSTGLCRNCQVRNSLFQA*IPWTSL
Trigger: AAGAGAAGTCCAAGGTATCAAAGCTTGAAAGAGAGA...GTTTCTTACTTGACAGTTCCTACACAACCCTGTTGAAAATCTACAATATATGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp AGCATATATTGTAGATTTTCAACAGGGTTGTGTAGGAACTGTCAAGTAAGAAACCTTGATTTTATCTGCTaGGATCATATTGCTCAGAGC +
Preference number: 5 (lower is better)
Translates to: SIYCRFSTGLCRNCQVRNLDFIC*DHIAQS
Trigger: GCTCTGAGCAATATGATCCAAGCAGATAAAATCAAG...GTTTCTTACTTGACAGTTCCTACACAACCCTGTTGAAAATCTACAATATATGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265272.9
ENST00000333010.6
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp CAAACTTTATTTCTCCTATTACTAGTGGAGAACACATTTGCTCTCTACCTAAGTCTTGATTTTATCTGCTaGGATCATATTGCTCAGAGC +
Preference number: 5 (lower is better)
Translates to: QTLFLLLLVENTFALYLSLDFIC*DHIAQS
Trigger: GCTCTGAGCAATATGATCCAAGCAGATAAAATCAAG...ACTTAGGTAGAGAGCAAATGTGTTCTCCACTAGTAATAGGAGAAATAAAGTTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616793.5
CDS-3UTR CAA 90 bp CAAACTTTATTTCTCCTATTACTAGTGGAGAACACATTTGCTCTCTACCTAAGTAGATTTTCAACAGGGTaGTGTAGGAACTGTCAAGTA +
Preference number: 5 (lower is better)
Translates to: QTLFLLLLVENTFALYLSRFSTG*CRNCQV
Trigger: TACTTGACAGTTCCTACACAACCCTGTTGAAAATCT...ACTTAGGTAGAGAGCAAATGTGTTCTCCACTAGTAATAGGAGAAATAAAGTTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616793.5
CDS-3UTR CAA 90 bp AGCATATATTGTAGATTTTCAACAGGGTTGTGTAGGAACTGTCAAGTAAGAAACGCTCATGAGCAAGAGTaGGTAAAAATTACAGTTCAG +
Preference number: 5 (lower is better)
Translates to: SIYCRFSTGLCRNCQVRNAHEQE*VKITVQ
Trigger: CTGAACTGTAATTTTTACCAACTCTTGCTCATGAGC...GTTTCTTACTTGACAGTTCCTACACAACCCTGTTGAAAATCTACAATATATGCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp AGCATATATTGTAGATTTTCAACAGGGTTGTGTAGGAACTGTCAAGTAAGAAACGATTCTCATATATGCTaGGTCAAGAGCTTGTTTTCT +
Preference number: 5 (lower is better)
Translates to: SIYCRFSTGLCRNCQVRNDSHIC*VKSLFS
Trigger: AGAAAACAAGCTCTTGACCAAGCATATATGAGAATC...GTTTCTTACTTGACAGTTCCTACACAACCCTGTTGAAAATCTACAATATATGCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265272.9
ENST00000333010.6
ENST00000507386.5
ENST00000616793.5
CDS-3UTR CAA 90 bp AGCATATATTGTAGATTTTCAACAGGGTTGTGTAGGAACTGTCAAGTAAGAAACGATTCTGCTGTGTTTTaGCCCAAATCATATAGCATA +
Preference number: 5 (lower is better)
Translates to: SIYCRFSTGLCRNCQVRNDSAVF*PKSYSI
Trigger: TATGCTATATGATTTGGGCAAAAACACAGCAGAATC...GTTTCTTACTTGACAGTTCCTACACAACCCTGTTGAAAATCTACAATATATGCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS CAA 72 bp CGGCGGCGGCAGCAGCAGCAGCAGCAGCATCACCAGTaGGGCCTCCTCCCTCTCGGAGGATGGGGTGAGCTC +
Preference number: 6 (lower is better)
Translates to: RRRQQQQQQHHQ*GLLPLGGWGEL
Trigger: GAGCTCACCCCATCCTCCGAGAGGGAGGAGGCCCAACTGGTGATGCTGCTGCTGCTGCTGCTGCCGCCGCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000333010.6
ENST00000616793.5
CDS CAA 90 bp TTCCGGGCCTCCTCCCGGGCCTCAATGGTGAGCGCTGTCCTTACTTaGTCACTGCTGCCGTCGCGGAGAGCACAGAGAGCAGACTTGAGC +
Preference number: 6 (lower is better)
Translates to: FRASSRASMVSAVLT*SLLPSRRAQRADLS
Trigger: GCTCAAGTCTGCTCTCTGTGCTCTCCGCGACGGCAGCAGTGACAAAGTAAGGACAGCGCTCACCATTGAGGCCCGGGAGGAGGCCCGGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265272.9
ENST00000333010.6
ENST00000507343.1
ENST00000507386.5
ENST00000616793.5
CDS TCA 72 bp TCACCAGTTGGGCCTCCTCCCTCTCGGAGGATGGGGTaGGCTCGGAAGCAGCCAGGAACTTGCAGCAGACAC +
Preference number: 6 (lower is better)
Translates to: SPVGPPPSRRMG*ARKQPGTCSRH
Trigger: GTGTCTGCTGCAAGTTCCTGGCTGCTTCCGAGCTCACCCCATCCTCCGAGAGGGAGGAGGCCCAACTGGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265272.9
ENST00000333010.6
CDS CCA 72 bp CAGCATCACCAGTTGGGCCTCCTCCCTCTCGGAGGATaGGGTGAGCTCGGAAGCAGCCAGGAACTTGCAGCA +
Preference number: 6 (lower is better)
Translates to: QHHQLGLLPLGG*GELGSSQELAA
Trigger: TGCTGCAAGTTCCTGGCTGCTTCCGAGCTCACCCCATCCTCCGAGAGGGAGGAGGCCCAACTGGTGATGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265272.9
ENST00000333010.6
CDS TCA 72 bp CAAACAGTTTCCGGGCCTCCTCCCGGGCCTCAATGGTaGGCGCTGTCCTTACTTTGTCACTGCTGCCGTCGC +
Preference number: 6 (lower is better)
Translates to: QTVSGPPPGPQW*ALSLLCHCCRR
Trigger: GCGACGGCAGCAGTGACAAAGTAAGGACAGCGCTCACCATTGAGGCCCGGGAGGAGGCCCGGAAACTGTTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265272.9
ENST00000333010.6
ENST00000507343.1
ENST00000507386.5
ENST00000616793.5
CDS CAA 72 bp TCCTCCCGGGCCTCAATGGTGAGCGCTGTCCTTACTTaGTCACTGCTGCCGTCGCGGAGAGCACAGAGAGCA +
Preference number: 6 (lower is better)
Translates to: SSRASMVSAVLT*SLLPSRRAQRA
Trigger: TGCTCTCTGTGCTCTCCGCGACGGCAGCAGTGACAAAGTAAGGACAGCGCTCACCATTGAGGCCCGGGAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265272.9
ENST00000333010.6
ENST00000507343.1
ENST00000507386.5
ENST00000616793.5
CDS TCA 72 bp CACTGCTGCCGTCGCGGAGAGCACAGAGAGCAGACTTaGGCCTCTGGATCTCTCCATCACGTACCTTCACCG +
Preference number: 6 (lower is better)
Translates to: HCCRRGEHREQT*ASGSLHHVPSP
Trigger: CGGTGAAGGTACGTGATGGAGAGATCCAGAGGCTCAAGTCTGCTCTCTGTGCTCTCCGCGACGGCAGCAGTG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265272.9
ENST00000333010.6
ENST00000507343.1
ENST00000507386.5
ENST00000616793.5
CDS CAA 72 bp CCGCTCCGACTCCCACTTGATCTTCGAGATGGCTTCTaGGTGGGACTGATGCTCACTCCGAAGGTCCCCAGC +
Preference number: 6 (lower is better)
Translates to: PLRLPLDLRDGF*VGLMLTPKVPS
Trigger: GCTGGGGACCTTCGGAGTGAGCATCAGTCCCACCAAGAAGCCATCTCGAAGATCAAGTGGGAGTCGGAGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265272.9
ENST00000333010.6
ENST00000507343.1
ENST00000507386.5
ENST00000616793.5
CDS GCA 72 bp TTGGCTTCTCGTTCAGCGTCGATGATGCCTCCCGTCTaGTCCTGTAGGAGGGCATATGCTCTTTGGAGGGCC +
Preference number: 6 (lower is better)
Translates to: LASRSASMMPPV*SCRRAYALWRA
Trigger: GGCCCTCCAAAGAGCATATGCCCTCCTACAGGAGCAGACGGGAGGCATCATCGACGCTGAACGAGAAGCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265272.9
ENST00000333010.6
ENST00000504845.1
ENST00000507386.5
ENST00000616793.5
CDS CCA 72 bp CCGTCGCGGAGAGCACAGAGAGCAGACTTGAGCCTCTaGATCTCTCCATCACGTACCTTCACCGTCCTTGAC +
Preference number: 6 (lower is better)
Translates to: PSRRAQRADLSL*ISPSRTFTVLD
Trigger: GTCAAGGACGGTGAAGGTACGTGATGGAGAGATCCAGAGGCTCAAGTCTGCTCTCTGTGCTCTCCGCGACGG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265272.9
ENST00000333010.6
ENST00000507343.1
ENST00000507386.5
ENST00000616793.5
CDS CAA 72 bp TCACTGCTGCCGTCGCGGAGAGCACAGAGAGCAGACTaGAGCCTCTGGATCTCTCCATCACGTACCTTCACC +
Preference number: 6 (lower is better)
Translates to: SLLPSRRAQRAD*SLWISPSRTFT
Trigger: GGTGAAGGTACGTGATGGAGAGATCCAGAGGCTCAAGTCTGCTCTCTGTGCTCTCCGCGACGGCAGCAGTGA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265272.9
ENST00000333010.6
ENST00000507343.1
ENST00000507386.5
ENST00000616793.5
CDS TCA 72 bp GCTGTTCTTGAGCCTTGGCTTCTCGTTCAGCGTCGATaGTGCCTCCCGTCTGCTCCTGTAGGAGGGCATATG +
Preference number: 6 (lower is better)
Translates to: AVLEPWLLVQRR*CLPSAPVGGHM
Trigger: CATATGCCCTCCTACAGGAGCAGACGGGAGGCATCATCGACGCTGAACGAGAAGCCAAGGCTCAAGAACAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265272.9
ENST00000333010.6
ENST00000504845.1
ENST00000507386.5
ENST00000616793.5
CDS GCA 72 bp TGGAGCTTGGCTTTGAGTTCTGTCACCAGCACCGTGTaGTTGCGCTGCTCCAGCTCACGAATCCTCTTCGCT +
Preference number: 6 (lower is better)
Translates to: WSLALSSVTSTV*LRCSSSRILFA
Trigger: AGCGAAGAGGATTCGTGAGCTGGAGCAGCGCAAGCACACGGTGCTGGTGACAGAACTCAAAGCCAAGCTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265272.9
ENST00000333010.6
ENST00000507343.1
ENST00000507386.5
ENST00000616793.5
CDS CAA 90 bp CTTACTTTGTCACTGCTGCCGTCGCGGAGAGCACAGAGAGCAGACTaGAGCCTCTGGATCTCTCCATCACGTACCTTCACCGTCCTTGAC +
Preference number: 6 (lower is better)
Translates to: LTLSLLPSRRAQRAD*SLWISPSRTFTVLD
Trigger: GTCAAGGACGGTGAAGGTACGTGATGGAGAGATCCAGAGGCTCAAGTCTGCTCTCTGTGCTCTCCGCGACGGCAGCAGTGACAAAGTAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265272.9
ENST00000333010.6
ENST00000507343.1
ENST00000507386.5
ENST00000616793.5
CDS TCA 72 bp CCATCAGCCTCCGAATATCCCGCTCCGACTCCCACTTaGTCTTCGAGATGGCTTCTTGGTGGGACTGATGCT +
Preference number: 6 (lower is better)
Translates to: PSASEYPAPTPT*SSRWLLGGTDA
Trigger: AGCATCAGTCCCACCAAGAAGCCATCTCGAAGATCAAGTGGGAGTCGGAGCGGGATATTCGGAGGCTGATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265272.9
ENST00000333010.6
ENST00000507386.5
ENST00000616793.5
CDS GCA 72 bp CGTACCTTCACCGTCCTTGACATTTCCTGCTCGTGCTaGTTGATAAGGTTCTCCCTCACAGCCTGCAGCTCC +
Preference number: 6 (lower is better)
Translates to: RTFTVLDISCSC*LIRFSLTACSS
Trigger: GGAGCTGCAGGCTGTGAGGGAGAACCTTATCAAGCAGCACGAGCAGGAAATGTCAAGGACGGTGAAGGTACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265272.9
ENST00000333010.6
ENST00000507343.1
ENST00000507386.5
ENST00000616793.5
CDS CAA 72 bp AGCTTGGCTTTGAGTTCTGTCACCAGCACCGTGTGCTaGCGCTGCTCCAGCTCACGAATCCTCTTCGCTTCT +
Preference number: 6 (lower is better)
Translates to: SLALSSVTSTVC*RCSSSRILFAS
Trigger: AGAAGCGAAGAGGATTCGTGAGCTGGAGCAGCGCAAGCACACGGTGCTGGTGACAGAACTCAAAGCCAAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265272.9
ENST00000333010.6
ENST00000507343.1
ENST00000507386.5
ENST00000616793.5
CDS CAA 90 bp CCGAATATCCCGCTCCGACTCCCACTTGATCTTCGAGATGGCTTCTaGGTGGGACTGATGCTCACTCCGAAGGTCCCCAGCCTTGATTTT +
Preference number: 6 (lower is better)
Translates to: PNIPLRLPLDLRDGF*VGLMLTPKVPSLDF
Trigger: AAAATCAAGGCTGGGGACCTTCGGAGTGAGCATCAGTCCCACCAAGAAGCCATCTCGAAGATCAAGTGGGAGTCGGAGCGGGATATTCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265272.9
ENST00000333010.6
ENST00000507343.1
ENST00000507386.5
ENST00000616793.5
CDS TCA 72 bp AATCCAGCCTCCGAATATCCCGCTCCGACTCCCACTTaGTCTTCGAGATGGCTTCTTGGTGGGACTGATGCT +
Preference number: 6 (lower is better)
Translates to: NPASEYPAPTPT*SSRWLLGGTDA
Trigger: AGCATCAGTCCCACCAAGAAGCCATCTCGAAGATCAAGTGGGAGTCGGAGCGGGATATTCGGAGGCTGGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507343.1
CDS GCA 72 bp ATCCTGGAGTACGATGTCTCAGCATCTACTGTGTGGTaGTCCTTGGTAAGGTCTCCTCAATCGCTGCCCTGG +
Preference number: 6 (lower is better)
Translates to: ILEYDVSASTVW*SLVRSPQSLPW
Trigger: CCAGGGCAGCGATTGAGGAGACCTTACCAAGGAGCACCACACAGTAGATGCTGAGACATCGTACTCCAGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS GCA 72 bp TCACGTACCTTCACCGTCCTTGACATTTCCTGCTCGTaGTGCTTGATAAGGTTCTCCCTCACAGCCTGCAGC +
Preference number: 6 (lower is better)
Translates to: SRTFTVLDISCS*CLIRFSLTACS
Trigger: GCTGCAGGCTGTGAGGGAGAACCTTATCAAGCAGCACGAGCAGGAAATGTCAAGGACGGTGAAGGTACGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265272.9
ENST00000333010.6
ENST00000507343.1
ENST00000507386.5
ENST00000616793.5
CDS CAA 90 bp CTTATCCTGGAGTACGATGTCTCAGCATCTACTGTGTGGTGCTCCTaGGTAAGGTCTCCTCAATCGCTGCCCTGGAAGCCCATGCTGAGA +
Preference number: 6 (lower is better)
Translates to: LILEYDVSASTVWCS*VRSPQSLPWKPMLR
Trigger: TCTCAGCATGGGCTTCCAGGGCAGCGATTGAGGAGACCTTACCAAGGAGCACCACACAGTAGATGCTGAGACATCGTACTCCAGGATAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS CAA 90 bp GGACTGATGCTCACTCCGAAGGTCCCCAGCCTTGATTTTATCTGCTaGGATCATATTGCTCAGAGCCTCGTCCACCTGCTTCTTGGCCGT +
Preference number: 6 (lower is better)
Translates to: GLMLTPKVPSLDFIC*DHIAQSLVHLLLGR
Trigger: ACGGCCAAGAAGCAGGTGGACGAGGCTCTGAGCAATATGATCCAAGCAGATAAAATCAAGGCTGGGGACCTTCGGAGTGAGCATCAGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265272.9
ENST00000333010.6
ENST00000507343.1
ENST00000507386.5
ENST00000616793.5
CDS GCA 72 bp TCTCCATCACGTACCTTCACCGTCCTTGACATTTCCTaGTCGTGCTGCTTGATAAGGTTCTCCCTCACAGCC +
Preference number: 6 (lower is better)
Translates to: SPSRTFTVLDIS*SCCLIRFSLTA
Trigger: GGCTGTGAGGGAGAACCTTATCAAGCAGCACGAGCAGGAAATGTCAAGGACGGTGAAGGTACGTGATGGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265272.9
ENST00000333010.6
ENST00000507343.1
ENST00000507386.5
ENST00000616793.5
CDS CCA 72 bp CTTATCCTGGAGTACGATGTCTCAGCATCTACTGTGTaGTGCTCCTTGGTAAGGTCTCCTCAATCGCTGCCC +
Preference number: 6 (lower is better)
Translates to: LILEYDVSASTV*CSLVRSPQSLP
Trigger: GGGCAGCGATTGAGGAGACCTTACCAAGGAGCACCACACAGTAGATGCTGAGACATCGTACTCCAGGATAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS CAA 90 bp CGCTGCAAGGACACCATCAGTTCATCGTTTCTCTTGGCGAGGCACTaGTTCCTTTCCAGGAGAGGTTTACATTGCTTTTCGGTTTCCCGC +
Preference number: 6 (lower is better)
Translates to: RCKDTISSSFLLARH*FLSRRGLHCFSVSR
Trigger: GCGGGAAACCGAAAAGCAATGTAAACCTCTCCTGGAAAGGAACAAGTGCCTCGCCAAGAGAAACGATGAACTGATGGTGTCCTTGCAGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265272.9
ENST00000333010.6
ENST00000507386.5
ENST00000616793.5
CDS TCA 72 bp CCTCTGGATCTCTCCATCACGTACCTTCACCGTCCTTaGCATTTCCTGCTCGTGCTGCTTGATAAGGTTCTC +
Preference number: 6 (lower is better)
Translates to: PLDLSITYLHRP*HFLLVLLDKVL
Trigger: GAGAACCTTATCAAGCAGCACGAGCAGGAAATGTCAAGGACGGTGAAGGTACGTGATGGAGAGATCCAGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265272.9
ENST00000333010.6
ENST00000507343.1
ENST00000507386.5
ENST00000616793.5
CDS TCA 72 bp GGTGGGACTGATGCTCACTCCGAAGGTCCCCAGCCTTaGTTTTATCTGCTTGGATCATATTGCTCAGAGCCT +
Preference number: 6 (lower is better)
Translates to: GGTDAHSEGPQP*FYLLGSYCSEP
Trigger: AGGCTCTGAGCAATATGATCCAAGCAGATAAAATCAAGGCTGGGGACCTTCGGAGTGAGCATCAGTCCCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265272.9
ENST00000333010.6
ENST00000507343.1
ENST00000507386.5
ENST00000616793.5
CDS TCA 72 bp TCCCACTTGATCTTCGAGATGGCTTCTTGGTGGGACTaGTGCTCACTCCGAAGGTCCCCAGCCTTGATTTTA +
Preference number: 6 (lower is better)
Translates to: SHLIFEMASWWD*CSLRRSPALIL
Trigger: TAAAATCAAGGCTGGGGACCTTCGGAGTGAGCATCAGTCCCACCAAGAAGCCATCTCGAAGATCAAGTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265272.9
ENST00000333010.6
ENST00000507343.1
ENST00000507386.5
ENST00000616793.5
CDS GCA 72 bp ATGCTCACTCCGAAGGTCCCCAGCCTTGATTTTATCTaGTTGGATCATATTGCTCAGAGCCTCGTCCACCTG +
Preference number: 6 (lower is better)
Translates to: MLTPKVPSLDFI*LDHIAQSLVHL
Trigger: CAGGTGGACGAGGCTCTGAGCAATATGATCCAAGCAGATAAAATCAAGGCTGGGGACCTTCGGAGTGAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265272.9
ENST00000333010.6
ENST00000507343.1
ENST00000507386.5
ENST00000616793.5
CDS CCA 72 bp GGATCATATTGCTCAGAGCCTCGTCCACCTGCTTCTTaGCCGTTTTCAGGTCCGCAATTTCCTGTAAGAGCT +
Preference number: 6 (lower is better)
Translates to: GSYCSEPRPPAS*PFSGPQFPVRA
Trigger: AGCTCTTACAGGAAATTGCGGACCTGAAAACGGCCAAGAAGCAGGTGGACGAGGCTCTGAGCAATATGATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265272.9
ENST00000333010.6
ENST00000507343.1
ENST00000507386.5
ENST00000616793.5
CDS CAA 72 bp AGGTCCCCAGCCTTGATTTTATCTGCTTGGATCATATaGCTCAGAGCCTCGTCCACCTGCTTCTTGGCCGTT +
Preference number: 6 (lower is better)
Translates to: RSPALILSAWII*LRASSTCFLAV
Trigger: AACGGCCAAGAAGCAGGTGGACGAGGCTCTGAGCAATATGATCCAAGCAGATAAAATCAAGGCTGGGGACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265272.9
ENST00000333010.6
ENST00000507343.1
ENST00000507386.5
ENST00000616793.5
CDS CAA 72 bp CTCACTCCGAAGGTCCCCAGCCTTGATTTTATCTGCTaGGATCATATTGCTCAGAGCCTCGTCCACCTGCTT +
Preference number: 6 (lower is better)
Translates to: LTPKVPSLDFIC*DHIAQSLVHLL
Trigger: AAGCAGGTGGACGAGGCTCTGAGCAATATGATCCAAGCAGATAAAATCAAGGCTGGGGACCTTCGGAGTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265272.9
ENST00000333010.6
ENST00000507343.1
ENST00000507386.5
ENST00000616793.5
CDS CAA 72 bp GCCCTTCCTGGAATTTCTCGTTTTGGGCTGCTCATGTaGCACTCAGCCTCCTTGACCAGAAAGAGTTGTTCG +
Preference number: 6 (lower is better)
Translates to: ALPGISRFGLLM*HSASLTRKSCS
Trigger: CGAACAACTCTTTCTGGTCAAGGAGGCTGAGTGCAACATGAGCAGCCCAAAACGAGAAATTCCAGGAAGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265272.9
ENST00000333010.6
ENST00000507386.5
ENST00000616793.5
CDS CAA 90 bp TTATCTGCTTGGATCATATTGCTCAGAGCCTCGTCCACCTGCTTCTaGGCCGTTTTCAGGTCCGCAATTTCCTGTAAGAGCTTAAGGCGC +
Preference number: 6 (lower is better)
Translates to: LSAWIILLRASSTCF*AVFRSAISCKSLRR
Trigger: GCGCCTTAAGCTCTTACAGGAAATTGCGGACCTGAAAACGGCCAAGAAGCAGGTGGACGAGGCTCTGAGCAATATGATCCAAGCAGATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265272.9
ENST00000333010.6
ENST00000507343.1
ENST00000507386.5
ENST00000616793.5
CDS CAA 72 bp ATGCGCTGCAAGGACACCATCAGTTCATCGTTTCTCTaGGCGAGGCACTTGTTCCTTTCCAGGAGAGGTTTA +
Preference number: 6 (lower is better)
Translates to: MRCKDTISSSFL*ARHLFLSRRGL
Trigger: TAAACCTCTCCTGGAAAGGAACAAGTGCCTCGCCAAGAGAAACGATGAACTGATGGTGTCCTTGCAGCGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265272.9
ENST00000333010.6
ENST00000507386.5
ENST00000616793.5
CDS CAA 72 bp TCCTTTTCCAGGGAAAAGATGATCCTGTCCTTGGCTTaGATTTCATCCATCAGCCTCCGAATATCCCGCTCC +
Preference number: 6 (lower is better)
Translates to: SFSREKMILSLA*ISSISLRISRS
Trigger: GGAGCGGGATATTCGGAGGCTGATGGATGAAATCAAAGCCAAGGACAGGATCATCTTTTCCCTGGAAAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265272.9
ENST00000333010.6
ENST00000507386.5
ENST00000616793.5
CDS CAA 90 bp TTTTCTTCCATGCGCTGCAAGGACACCATCAGTTCATCGTTTCTCTaGGCGAGGCACTTGTTCCTTTCCAGGAGAGGTTTACATTGCTTT +
Preference number: 6 (lower is better)
Translates to: FSSMRCKDTISSSFL*ARHLFLSRRGLHCF
Trigger: AAAGCAATGTAAACCTCTCCTGGAAAGGAACAAGTGCCTCGCCAAGAGAAACGATGAACTGATGGTGTCCTTGCAGCGCATGGAAGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265272.9
ENST00000333010.6
ENST00000507386.5
ENST00000616793.5
CDS TCA 72 bp TGGTCTCTGGCGTCCTGTAGTTCTTGTTGTAACCGGTaGTTTTCTGCCTCCTGTTTTTCTATCTGCCCTTTC +
Preference number: 6 (lower is better)
Translates to: WSLASCSSCCNR*FSASCFSICPF
Trigger: GAAAGGGCAGATAGAAAAACAGGAGGCAGAAAATCACCGGTTACAACAAGAACTACAGGACGCCAGAGACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507386.5
CDS GCA 72 bp TCCTTGGTAACGGCTTTTAGTTTTTCTTCCATGCGCTaGAAGGACACCATCAGTTCATCGTTTCTCTTGGCG +
Preference number: 6 (lower is better)
Translates to: SLVTAFSFSSMR*KDTISSSFLLA
Trigger: CGCCAAGAGAAACGATGAACTGATGGTGTCCTTGCAGCGCATGGAAGAAAAACTAAAAGCCGTTACCAAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265272.9
ENST00000333010.6
ENST00000507386.5
ENST00000616793.5
CDS CAA 72 bp GACACCATCAGTTCATCGTTTCTCTTGGCGAGGCACTaGTTCCTTTCCAGGAGAGGTTTACATTGCTTTTCG +
Preference number: 6 (lower is better)
Translates to: DTISSSFLLARH*FLSRRGLHCFS
Trigger: CGAAAAGCAATGTAAACCTCTCCTGGAAAGGAACAAGTGCCTCGCCAAGAGAAACGATGAACTGATGGTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265272.9
ENST00000333010.6
ENST00000507386.5
ENST00000616793.5
CDS CAA 90 bp GCTCCTGTAGGAGGGCATATGCTCTTTGGAGGGCCTGATATTCTTTaGTTAATTGTCGAAATCTTAGTTCAGATTCTTCAGCTGCTAAAC +
Preference number: 6 (lower is better)
Translates to: APVGGHMLFGGPDIL*LIVEILVQILQLLN
Trigger: GTTTAGCAGCTGAAGAATCTGAACTAAGATTTCGACAATTAACAAAAGAATATCAGGCCCTCCAAAGAGCATATGCCCTCCTACAGGAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265272.9
ENST00000333010.6
ENST00000504845.1
ENST00000507386.5
ENST00000616793.5
CDS TCA 72 bp TGCTCCTGTAGGAGGGCATATGCTCTTTGGAGGGCCTaGTATTCTTTTGTTAATTGTCGAAATCTTAGTTCA +
Preference number: 6 (lower is better)
Translates to: CSCRRAYALWRA*YSFVNCRNLSS
Trigger: TGAACTAAGATTTCGACAATTAACAAAAGAATATCAGGCCCTCCAAAGAGCATATGCCCTCCTACAGGAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265272.9
ENST00000333010.6
ENST00000504845.1
ENST00000507386.5
ENST00000616793.5
CDS CAA 72 bp GGAGGGCATATGCTCTTTGGAGGGCCTGATATTCTTTaGTTAATTGTCGAAATCTTAGTTCAGATTCTTCAG +
Preference number: 6 (lower is better)
Translates to: GGHMLFGGPDIL*LIVEILVQILQ
Trigger: CTGAAGAATCTGAACTAAGATTTCGACAATTAACAAAAGAATATCAGGCCCTCCAAAGAGCATATGCCCTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265272.9
ENST00000333010.6
ENST00000504845.1
ENST00000507386.5
ENST00000616793.5
CDS CAA 90 bp TATTTCGCCCTTTCTTGGACATTGTTCCTTTCTAAATGGAGTCTGTaGGTTTTTAATTTCTTTCAAGCAGGTGCTGCCATGTTACTGTTT +
Preference number: 6 (lower is better)
Translates to: YFALSWTLFLSKWSL*VFNFFQAGAAMLLF
Trigger: AAACAGTAACATGGCAGCACCTGCTTGAAAGAAATTAAAAACCAACAGACTCCATTTAGAAAGGAACAATGTCCAAGAAAGGGCGAAATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265272.9
ENST00000507386.5
ENST00000616793.5
CDS CAA 72 bp TCACCAAACTTGATAACAGTTTCTTGCTGTAGAGCATaGTACAAAGTAGCTTCTAGTTCCTGGATTCTCATA +
Preference number: 6 (lower is better)
Translates to: SPNLITVSCCRA*YKVASSSWILI
Trigger: TATGAGAATCCAGGAACTAGAAGCTACTTTGTACAATGCTCTACAGCAAGAAACTGTTATCAAGTTTGGTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265272.9
ENST00000333010.6
ENST00000507386.5
ENST00000616793.5