RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for JAK3 (Homo sapiens)

Ensembl gene IDs: ENSG00000105639

Ensembl transcript IDs: ENST00000458235.7, ENST00000526008.5, ENST00000527031.5, ENST00000527670.5, ENST00000528293.1, ENST00000528705.1, ENST00000534444.1

Found 578 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGGTTGGGAAGATGCGAGAGTCTTAAATTTGGTTCCTTGCTTCTTTaGGCCAGGACTCAGAGAGCCCCACTGACACATATGCCCATCTGT +
Preference number: 1 (lower is better)
Translates to: GLGRCESLKFGSLLL*ARTQRAPLTHMPIC
Trigger: ACAGATGGGCATATGTGTCAGTGGGGCTCTCTGAGTCCTGGCCCAAAGAAGCAAGGAACCAAATTTAAGACTCTCGCATCTTCCCAACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
3UTR-3UTR CCA 90 bp AGGGAAAGGAACTTGCCCACTGTCACACTGCATGGAAGGGGCAAAACTGTAGGCGTAATCCCAGCACTTTaGGAGGCCGAGACGGGCAGA +
Preference number: 2 (lower is better)
Translates to: RERNLPTVTLHGRGKTVGVIPAL*EAETGR
Trigger: TCTGCCCGTCTCGGCCTCCCAAAGTGCTGGGATTAC...GCCTACAGTTTTGCCCCTTCCATGCAGTGTGACAGTGGGCAAGTTCCTTTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458235.7
3UTR-3UTR TCA 90 bp CCCAGAGAGGGAAAGGAACTTGCCCACTGTCACACTGCATGGAAGGGGCAAAACGACAGGTGGGAAAACTaGAGCCCTAGGACACTCAGA +
Preference number: 2 (lower is better)
Translates to: PREGKELAHCHTAWKGQNDRWEN*SPRTLR
Trigger: TCTGAGTGTCCTAGGGCTTCAGTTTTCCCACCTGTC...GTTTTGCCCCTTCCATGCAGTGTGACAGTGGGCAAGTTCCTTTCCCTCTCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000458235.7
3UTR-3UTR GCA 90 bp CATGGAAGGGGCAAAACTGTAGGCTCCAATACTTGGGCTCTTAACCTCCTTACTCCAGGAGGCGGAGCTTaGAGTGAGCCTAGATTGCGC +
Preference number: 2 (lower is better)
Translates to: HGRGKTVGSNTWALNLLTPGGGA*SEPRLR
Trigger: GCGCAATCTAGGCTCACTGCAAGCTCCGCCTCCTGG...AGTAAGGAGGTTAAGAGCCCAAGTATTGGAGCCTACAGTTTTGCCCCTTCCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458235.7
3UTR-3UTR CCA 90 bp TTGCGTGAAAAGTTCCTGCCAGGTTTGGTGTCATCCCTTTGTGCCCCTTGTAGGGGTTCCTTGCTTCTTTaGGCCAGGACTCAGAGAGCC +
Preference number: 2 (lower is better)
Translates to: LREKFLPGLVSSLCAPCRGSLLL*ARTQRA
Trigger: GGCTCTCTGAGTCCTGGCCCAAAGAAGCAAGGAACC...CCTACAAGGGGCACAAAGGGATGACACCAAACCTGGCAGGAACTTTTCACGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000458235.7
3UTR-3UTR CCA 90 bp CCCAGAGAGGGAAAGGAACTTGCCCACTGTCACACTGCATGGAAGGGGCAAAACCAGGGCTTAAGGGGTTaGGAAGATGCGAGAGTCTTA +
Preference number: 2 (lower is better)
Translates to: PREGKELAHCHTAWKGQNQGLRG*EDARVL
Trigger: TAAGACTCTCGCATCTTCCCAACCCCTTAAGCCCTG...GTTTTGCCCCTTCCATGCAGTGTGACAGTGGGCAAGTTCCTTTCCCTCTCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000458235.7
3UTR CAA 90 bp GGGCTTAAGGGGTTGGGAAGATGCGAGAGTCTTAAATTTGGTTCCTaGCTTCTTTGGGCCAGGACTCAGAGAGCCCCACTGACACATATG +
Preference number: 2 (lower is better)
Translates to: GLKGLGRCESLKFGS*LLWARTQRAPLTHM
Trigger: CATATGTGTCAGTGGGGCTCTCTGAGTCCTGGCCCAAAGAAGCAAGGAACCAAATTTAAGACTCTCGCATCTTCCCAACCCCTTAAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
3UTR-3UTR GCA 90 bp TATGAGGGAAGGCTGCAAGGATGTGGTAGCTGGAGTTTTGAGAGATGGATAAGACCGAGATCGCACCACTaGACTCCACCCTGGGTAACA +
Preference number: 2 (lower is better)
Translates to: YEGRLQGCGSWSFERWIRPRSHH*TPPWVT
Trigger: TGTTACCCAGGGTGGAGTGCAGTGGTGCGATCTCGG...TCTTATCCATCTCTCAAAACTCCAGCTACCACATCCTTGCAGCCTTCCCTCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458235.7
3UTR-3UTR GCA 90 bp CCCAGAGAGGGAAAGGAACTTGCCCACTGTCACACTGCATGGAAGGGGCAAAACTTTCCTTCCCTTGATTaGGTGAAAAGTTCCTGCCAG +
Preference number: 2 (lower is better)
Translates to: PREGKELAHCHTAWKGQNFPSLD*VKSSCQ
Trigger: CTGGCAGGAACTTTTCACGCAATCAAGGGAAGGAAA...GTTTTGCCCCTTCCATGCAGTGTGACAGTGGGCAAGTTCCTTTCCCTCTCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000458235.7
3UTR-3UTR TCA 90 bp TATGAGGGAAGGCTGCAAGGATGTGGTAGCTGGAGTTTTGAGAGATGGATAAGACTCAGAGAGCCCCACTaGCACATATGCCCATCTGTC +
Preference number: 2 (lower is better)
Translates to: YEGRLQGCGSWSFERWIRLREPH*HICPSV
Trigger: GACAGATGGGCATATGTGTCAGTGGGGCTCTCTGAG...TCTTATCCATCTCTCAAAACTCCAGCTACCACATCCTTGCAGCCTTCCCTCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458235.7
3UTR-3UTR GCA 90 bp TATGAGGGAAGGCTGCAAGGATGTGGTAGCTGGAGTTTTGAGAGATGGATAAGATGCCCACTGTCACACTaGATGGAAGGGGCAAAACTG +
Preference number: 2 (lower is better)
Translates to: YEGRLQGCGSWSFERWIRCPLSH*MEGAKL
Trigger: CAGTTTTGCCCCTTCCATGCAGTGTGACAGTGGGCA...TCTTATCCATCTCTCAAAACTCCAGCTACCACATCCTTGCAGCCTTCCCTCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000458235.7
3UTR-3UTR TCA 90 bp CTCATAGGCACAGGTGTTCAGGAGTCTAATCTTCCCTCACCCTATAAGGCATTAGGTAAACTGAGGCTCTaGAAGTGCTCTGACTTGCCA +
Preference number: 2 (lower is better)
Translates to: LIGTGVQESNLPSPYKALGKLRL*KCSDLP
Trigger: TGGCAAGTCAGAGCACTTTCAGAGCCTCAGTTTACC...TAATGCCTTATAGGGTGAGGGAAGATTAGACTCCTGAACACCTGTGCCTATGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534444.1
3UTR-3UTR GCA 90 bp CCAGTCAGAAAGTTGACCCTGCACAGCCAAGGGGTAAGCTCTGACCATTTTGCAAAGGGGTTGGGAAGATaGGAGAGTCTTAAATTTGGT +
Preference number: 2 (lower is better)
Translates to: PVRKLTLHSQGVSSDHFAKGLGR*ESLKFG
Trigger: ACCAAATTTAAGACTCTCGCATCTTCCCAACCCCTT...TGCAAAATGGTCAGAGCTTACCCCTTGGCTGTGCAGGGTCAACTTTCTGACTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000458235.7
3UTR-3UTR GCA 90 bp TATGAGGGAAGGCTGCAAGGATGTGGTAGCTGGAGTTTTGAGAGATGGATAAGAAGCAGAAGCTTAACCTaGATGAGAATCCCTCTCACC +
Preference number: 2 (lower is better)
Translates to: YEGRLQGCGSWSFERWIRSRSLT*MRIPLT
Trigger: GGTGAGAGGGATTCTCATGCAGGTTAAGCTTCTGCT...TCTTATCCATCTCTCAAAACTCCAGCTACCACATCCTTGCAGCCTTCCCTCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458235.7
3UTR-3UTR TCA 90 bp TTGCGTGAAAAGTTCCTGCCAGGTTTGGTGTCATCCCTTTGTGCCCCTTGTAGGTATGCCCATCTGTCTTaGACCTTAACAAATTGCAAA +
Preference number: 2 (lower is better)
Translates to: LREKFLPGLVSSLCAPCRYAHLS*TLTNCK
Trigger: TTTGCAATTTGTTAAGGTTCAAGACAGATGGGCATA...CCTACAAGGGGCACAAAGGGATGACACCAAACCTGGCAGGAACTTTTCACGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458235.7
3UTR TCA 72 bp CAGGTTTGGTGTCATCCCTTTGTGCCCCTTGTAGGGTaGGGACAGAAAGGGTCCCATTGGACAGGTGGGAAA +
Preference number: 3 (lower is better)
Translates to: QVWCHPFVPLVG*GQKGSHWTGGK
Trigger: TTTCCCACCTGTCCAATGGGACCCTTTCTGTCCTCACCCTACAAGGGGCACAAAGGGATGACACCAAACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458235.7
3UTR CCA 72 bp AGAGAGGGAAAGGAACTTGCCCACTGTCACACTGCATaGAAGGGGCAAAACTGTAGGCTCCAATACTTGGGC +
Preference number: 3 (lower is better)
Translates to: REGKELAHCHTA*KGQNCRLQYLG
Trigger: GCCCAAGTATTGGAGCCTACAGTTTTGCCCCTTCCATGCAGTGTGACAGTGGGCAAGTTCCTTTCCCTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458235.7
3UTR CCA 72 bp CTGCATGGAAGGGGCAAAACTGTAGGCTCCAATACTTaGGCTCTTAACCTCCTTACTCTGAGCCTTCTCACG +
Preference number: 3 (lower is better)
Translates to: LHGRGKTVGSNT*ALNLLTLSLLT
Trigger: CGTGAGAAGGCTCAGAGTAAGGAGGTTAAGAGCCCAAGTATTGGAGCCTACAGTTTTGCCCCTTCCATGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458235.7
3UTR-3UTR CAA 90 bp TATGAGGGAAGGCTGCAAGGATGTGGTAGCTGGAGTTTTGAGAGATGGATAAGATCACCAGTCAGAAAGTaGACCCTGCACAGCCAAGGG +
Preference number: 3 (lower is better)
Translates to: YEGRLQGCGSWSFERWIRSPVRK*TLHSQG
Trigger: CCCTTGGCTGTGCAGGGTCAACTTTCTGACTGGTGA...TCTTATCCATCTCTCAAAACTCCAGCTACCACATCCTTGCAGCCTTCCCTCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458235.7
3UTR-3UTR CAA 90 bp CCCAGAGAGGGAAAGGAACTTGCCCACTGTCACACTGCATGGAAGGGGCAAAACTTGAACCTTAACAAATaGCAAAGGCCACAGGCTATT +
Preference number: 3 (lower is better)
Translates to: PREGKELAHCHTAWKGQNLNLNK*QRPQAI
Trigger: AATAGCCTGTGGCCTTTGCAATTTGTTAAGGTTCAA...GTTTTGCCCCTTCCATGCAGTGTGACAGTGGGCAAGTTCCTTTCCCTCTCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458235.7
3UTR GCA 72 bp AATGCCTTTCCTTCCCTTGATTGCGTGAAAAGTTCCTaGCAGGTTTGGTGTCATCCCTTTGTGCCCCTTGTA +
Preference number: 3 (lower is better)
Translates to: NAFPSLDCVKSS*QVWCHPFVPLV
Trigger: TACAAGGGGCACAAAGGGATGACACCAAACCTGGCAGGAACTTTTCACGCAATCAAGGGAAGGAAAGGCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458235.7
3UTR-3UTR CAA 90 bp GGTTGGGAAGATGCGAGAGTCTTAAATTTGGTTCCTTGCTTCTTTGGGCCAGGAATATGCCCATCTGTCTaGAACCTTAACAAATTGCAA +
Preference number: 3 (lower is better)
Translates to: GWEDARVLNLVPCFFGPGICPSV*NLNKLQ
Trigger: TTGCAATTTGTTAAGGTTCAAGACAGATGGGCATAT...TCCTGGCCCAAAGAAGCAAGGAACCAAATTTAAGACTCTCGCATCTTCCCAACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
3UTR TCA 72 bp AAGGCATTACTATTCTCATTTTGGAAAAGGGTAAACTaGGGCTCTGAAAGTGCTCTGACTTGCCACACAGTG +
Preference number: 3 (lower is better)
Translates to: KALLFSFWKRVN*GSESALTCHTV
Trigger: CACTGTGTGGCAAGTCAGAGCACTTTCAGAGCCTCAGTTTACCCTTTTCCAAAATGAGAATAGTAATGCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS-3UTR CCA 90 bp CCTGAAGTAGAGGACCCTCATAAGGCCTCTGAGGCCCAGAGAGGGGCAGCTCCGCAGGCAGGATGCCGCTaGCCTTGGCAGCCTGCACGC +
Preference number: 4 (lower is better)
Translates to: PEVEDPHKASEAQRGAAPQAGCR*PWQPAR
Trigger: GCGTGCAGGCTGCCAAGGCCAGCGGCATCCTGCCTG...CGGAGCTGCCCCTCTCTGGGCCTCAGAGGCCTTATGAGGGTCCTCTACTTCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR CCA 90 bp GGTGTTCCTGAAGTAGAGGACCCTCATAAGGCCTCTGAGGCCCAGAGAGGGGCAAGCCCCAGCCCGTCGTaGCCACCAAGGGCCCCAGGG +
Preference number: 4 (lower is better)
Translates to: GVPEVEDPHKASEAQRGASPSPS*PPRAPG
Trigger: CCCTGGGGCCCTTGGTGGCCACGACGGGCTGGGGCT...TGCCCCTCTCTGGGCCTCAGAGGCCTTATGAGGGTCCTCTACTTCAGGAACACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR GCA 90 bp GGTGTTCCTGAAGTAGAGGACCCTCATAAGGCCTCTGAGGCCCAGAGAGGGGCACGCGCGCGGTGCCGCTaGAGGAAGTCGCGCAAGCAG +
Preference number: 4 (lower is better)
Translates to: GVPEVEDPHKASEAQRGARARCR*RKSRKQ
Trigger: CTGCTTGCGCGACTTCCTGCAGCGGCACCGCGCGCG...TGCCCCTCTCTGGGCCTCAGAGGCCTTATGAGGGTCCTCTACTTCAGGAACACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR CCA 90 bp CCTGAAGTAGAGGACCCTCATAAGGCCTCTGAGGCCCAGAGAGGGGCAGCTCCGCCTGCAGCTTCCAGCTaGCTGGCACCAGGTGGCCAC +
Preference number: 4 (lower is better)
Translates to: PEVEDPHKASEAQRGAAPPAASS*LAPGGH
Trigger: GTGGCCACCTGGTGCCAGCCAGCTGGAAGCTGCAGG...CGGAGCTGCCCCTCTCTGGGCCTCAGAGGCCTTATGAGGGTCCTCTACTTCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR CCA 90 bp CCTGAAGTAGAGGACCCTCATAAGGCCTCTGAGGCCCAGAGAGGGGCAGCTCCGGTCCCTCTGCTGGTCTaGCCCGCTGTGCTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: PEVEDPHKASEAQRGAAPVPLLV*PAVLQL
Trigger: CAGCTGCAGCACAGCGGGCCAGACCAGCAGAGGGAC...CGGAGCTGCCCCTCTCTGGGCCTCAGAGGCCTTATGAGGGTCCTCTACTTCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR TCA 90 bp CCTGAAGTAGAGGACCCTCATAAGGCCTCTGAGGCCCAGAGAGGGGCAGCTCCGCCAACACGGCCAGGCTaGGACACTCACCCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: PEVEDPHKASEAQRGAAPPTRPG*DTHPAP
Trigger: AGGAGCAGGGTGAGTGTCTCAGCCTGGCCGTGTTGG...CGGAGCTGCCCCTCTCTGGGCCTCAGAGGCCTTATGAGGGTCCTCTACTTCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR GCA 90 bp GGTGTTCCTGAAGTAGAGGACCCTCATAAGGCCTCTGAGGCCCAGAGAGGGGCAACAGTGACCAGGCGGTaGTCTCCGGCCGGGCCAACG +
Preference number: 4 (lower is better)
Translates to: GVPEVEDPHKASEAQRGATVTRR*SPAGPT
Trigger: CGTTGGCCCGGCCGGAGAGCACCGCCTGGTCACTGT...TGCCCCTCTCTGGGCCTCAGAGGCCTTATGAGGGTCCTCTACTTCAGGAACACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR CCA 90 bp CCTGAAGTAGAGGACCCTCATAAGGCCTCTGAGGCCCAGAGAGGGGCAGCTCCGCAGAAAATGGGGCTCTaGCCTGGCTCGCGGACCACG +
Preference number: 4 (lower is better)
Translates to: PEVEDPHKASEAQRGAAPQKMGL*PGSRTT
Trigger: CGTGGTCCGCGAGCCAGGCCAGAGCCCCATTTTCTG...CGGAGCTGCCCCTCTCTGGGCCTCAGAGGCCTTATGAGGGTCCTCTACTTCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR TCA 90 bp CCCAGAGAGGGAAAGGAACTTGCCCACTGTCACACTGCATGGAAGGGGCAAAACGGGGGCCCAGGGCGCTaGATGATGGCCGGTCCTGTG +
Preference number: 4 (lower is better)
Translates to: PREGKELAHCHTAWKGQNGGPGR*MMAGPV
Trigger: CACAGGACCGGCCATCATTCAGCGCCCTGGGCCCCC...GTTTTGCCCCTTCCATGCAGTGTGACAGTGGGCAAGTTCCTTTCCCTCTCTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000458235.7
CDS-3UTR GCA 90 bp GGTGTTCCTGAAGTAGAGGACCCTCATAAGGCCTCTGAGGCCCAGAGAGGGGCATTGGCCATGAGCGAGTaGCGGTCTGCCTGGCAGGCG +
Preference number: 4 (lower is better)
Translates to: GVPEVEDPHKASEAQRGALAMSE*RSAWQA
Trigger: CGCCTGCCAGGCAGACCGGCACTCGCTCATGGCCAA...TGCCCCTCTCTGGGCCTCAGAGGCCTTATGAGGGTCCTCTACTTCAGGAACACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR GCA 90 bp CCCAGAGAGGGAAAGGAACTTGCCCACTGTCACACTGCATGGAAGGGGCAAAACCCTGGGTCCAGGCGATaGCGCCGTCACCAGCCACGC +
Preference number: 4 (lower is better)
Translates to: PREGKELAHCHTAWKGQNPGSRR*RRHQPR
Trigger: GCGTGGCTGGTGACGGCGGCATCGCCTGGACCCAGG...GTTTTGCCCCTTCCATGCAGTGTGACAGTGGGCAAGTTCCTTTCCCTCTCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458235.7
CDS-3UTR GCA 90 bp TGGGGGCCAGGATCCTCATCGGCCTCACACTCTAGCCTTTCTTCTCAGTACAGACGCGCGCGGTGCCGCTaGAGGAAGTCGCGCAAGCAG +
Preference number: 4 (lower is better)
Translates to: WGPGSSSASHSSLSSQYRRARCR*RKSRKQ
Trigger: CTGCTTGCGCGACTTCCTGCAGCGGCACCGCGCGCG...TCTGTACTGAGAAGAAAGGCTAGAGTGTGAGGCCGATGAGGATCCTGGCCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS-3UTR GCA 90 bp CCTGAAGTAGAGGACCCTCATAAGGCCTCTGAGGCCCAGAGAGGGGCAGCTCCGACTCGGCCGAGGGGCTaGAGCTTTTGTCGCAGTAGG +
Preference number: 4 (lower is better)
Translates to: PEVEDPHKASEAQRGAAPTRPRG*SFCRSR
Trigger: CCTACTGCGACAAAAGCTGCAGCCCCTCGGCCGAGT...CGGAGCTGCCCCTCTCTGGGCCTCAGAGGCCTTATGAGGGTCCTCTACTTCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR CCA 90 bp CCTGAAGTAGAGGACCCTCATAAGGCCTCTGAGGCCCAGAGAGGGGCAGCTCCGAGGTCACTGCGGTGCTaGGCAAAGAGGTGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: PEVEDPHKASEAQRGAAPRSLRC*AKRCSR
Trigger: CCTGGAGCACCTCTTTGCCCAGCACCGCAGTGACCT...CGGAGCTGCCCCTCTCTGGGCCTCAGAGGCCTTATGAGGGTCCTCTACTTCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR CCA 90 bp CTTTGGGCCAGGACTCAGAGAGCCCCACTGACACATATGCCCATCTGTCTTGAACCAGGGAGGCCCACGTaGAAGGTCTCGGCGGCCCCG +
Preference number: 4 (lower is better)
Translates to: LWARTQRAPLTHMPICLEPGRPT*KVSAAP
Trigger: CGGGGCCGCCGAGACCTTCCACGTGGGCCTCCCTGG...TTCAAGACAGATGGGCATATGTGTCAGTGGGGCTCTCTGAGTCCTGGCCCAAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR CCA 90 bp GGTGTTCCTGAAGTAGAGGACCCTCATAAGGCCTCTGAGGCCCAGAGAGGGGCAGTCCCTCTGCTGGTCTaGCCCGCTGTGCTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: GVPEVEDPHKASEAQRGAVPLLV*PAVLQL
Trigger: CAGCTGCAGCACAGCGGGCCAGACCAGCAGAGGGAC...TGCCCCTCTCTGGGCCTCAGAGGCCTTATGAGGGTCCTCTACTTCAGGAACACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR TCA 90 bp CCTGAAGTAGAGGACCCTCATAAGGCCTCTGAGGCCCAGAGAGGGGCAGCTCCGATAGGAGCCAGGACGTaGGCCCCCAGTCTTGAGCTT +
Preference number: 4 (lower is better)
Translates to: PEVEDPHKASEAQRGAAPIGART*APSLEL
Trigger: AAGCTCAAGACTGGGGGCTCACGTCCTGGCTCCTAT...CGGAGCTGCCCCTCTCTGGGCCTCAGAGGCCTTATGAGGGTCCTCTACTTCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR TCA 90 bp CCTGAAGTAGAGGACCCTCATAAGGCCTCTGAGGCCCAGAGAGGGGCAGCTCCGCCCGGTAAATCTTGGTaGAGGACCCATGGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: PEVEDPHKASEAQRGAAPPGKSW*RTHGPG
Trigger: ACCTGGGCCATGGGTCCTTCACCAAGATTTACCGGG...CGGAGCTGCCCCTCTCTGGGCCTCAGAGGCCTTATGAGGGTCCTCTACTTCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR TCA 90 bp CTTTGGGCCAGGACTCAGAGAGCCCCACTGACACATATGCCCATCTGTCTTGAAGGGGGCCCAGGGCGCTaGATGATGGCCGGTCCTGTG +
Preference number: 4 (lower is better)
Translates to: LWARTQRAPLTHMPICLEGGPGR*MMAGPV
Trigger: CACAGGACCGGCCATCATTCAGCGCCCTGGGCCCCC...TTCAAGACAGATGGGCATATGTGTCAGTGGGGCTCTCTGAGTCCTGGCCCAAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR GCA 90 bp TGGGGGCCAGGATCCTCATCGGCCTCACACTCTAGCCTTTCTTCTCAGTACAGAGCGGGCAGCAGCACATaGAGGGCACCAGCCTCCGTG +
Preference number: 4 (lower is better)
Translates to: WGPGSSSASHSSLSSQYRAGSST*RAPASV
Trigger: CACGGAGGCTGGTGCCCTGCATGTGCTGCTGCCCGC...TCTGTACTGAGAAGAAAGGCTAGAGTGTGAGGCCGATGAGGATCCTGGCCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS-3UTR GCA 90 bp GGTGTTCCTGAAGTAGAGGACCCTCATAAGGCCTCTGAGGCCCAGAGAGGGGCAGGTACACAGGCAGGATaGCGCTGGCCTTGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: GVPEVEDPHKASEAQRGAGTQAG*RWPWQP
Trigger: AGGCTGCCAAGGCCAGCGGCATCCTGCCTGTGTACC...TGCCCCTCTCTGGGCCTCAGAGGCCTTATGAGGGTCCTCTACTTCAGGAACACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR GCA 90 bp CCTGAAGTAGAGGACCCTCATAAGGCCTCTGAGGCCCAGAGAGGGGCAGCTCCGACAGCAGGACTTGGGTaGTGGCATCCTCCACGGAGA +
Preference number: 4 (lower is better)
Translates to: PEVEDPHKASEAQRGAAPTAGLG*WHPPRR
Trigger: TCTCCGTGGAGGATGCCAGCACCCAAGTCCTGCTGT...CGGAGCTGCCCCTCTCTGGGCCTCAGAGGCCTTATGAGGGTCCTCTACTTCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR GCA 90 bp CTTTGGGCCAGGACTCAGAGAGCCCCACTGACACATATGCCCATCTGTCTTGAACCTGGGTCCAGGCGATaGCGCCGTCACCAGCCACGC +
Preference number: 4 (lower is better)
Translates to: LWARTQRAPLTHMPICLEPGSRR*RRHQPR
Trigger: GCGTGGCTGGTGACGGCGGCATCGCCTGGACCCAGG...TTCAAGACAGATGGGCATATGTGTCAGTGGGGCTCTCTGAGTCCTGGCCCAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR CCA 90 bp CTCAGGGGGCCAGGGCTTAAGGGGTTGGGAAGATGCGAGAGTCTTAAATTTGGTAGCTCTCCCGGCCGCTaGGCCTGCTCTCGCGCCATC +
Preference number: 4 (lower is better)
Translates to: LRGPGLKGLGRCESLKFGSSPGR*ACSRAI
Trigger: GATGGCGCGAGAGCAGGCCCAGCGGCCGGGAGAGCT...ACCAAATTTAAGACTCTCGCATCTTCCCAACCCCTTAAGCCCTGGCCCCCTGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR CCA 90 bp TCAGGGGGCCAGGGCTTAAGGGGTTGGGAAGATGCGAGAGTCTTAAATTTGGTTAGCCCCAGCCCGTCGTaGCCACCAAGGGCCCCAGGG +
Preference number: 4 (lower is better)
Translates to: SGGQGLRGWEDARVLNLVSPSPS*PPRAPG
Trigger: CCCTGGGGCCCTTGGTGGCCACGACGGGCTGGGGCT...AACCAAATTTAAGACTCTCGCATCTTCCCAACCCCTTAAGCCCTGGCCCCCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR CCA 90 bp CCTGAAGTAGAGGACCCTCATAAGGCCTCTGAGGCCCAGAGAGGGGCAGCTCCGTTGCAGAAGAAGTGCTaGGAGTCCGTGGTCAGCCGG +
Preference number: 4 (lower is better)
Translates to: PEVEDPHKASEAQRGAAPLQKKC*ESVVSR
Trigger: CCGGCTGACCACGGACTCCCAGCACTTCTTCTGCAA...CGGAGCTGCCCCTCTCTGGGCCTCAGAGGCCTTATGAGGGTCCTCTACTTCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR CCA 90 bp GGTGTTCCTGAAGTAGAGGACCCTCATAAGGCCTCTGAGGCCCAGAGAGGGGCACACAGCATGTCCAGCTaGGGGCCCAGGGCGCTGAAT +
Preference number: 4 (lower is better)
Translates to: GVPEVEDPHKASEAQRGAHSMSS*GPRALN
Trigger: ATTCAGCGCCCTGGGCCCCCAGCTGGACATGCTGTG...TGCCCCTCTCTGGGCCTCAGAGGCCTTATGAGGGTCCTCTACTTCAGGAACACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR CCA 90 bp CCTGAAGTAGAGGACCCTCATAAGGCCTCTGAGGCCCAGAGAGGGGCAGCTCCGACCATTAGGGTGGACTaGGACCCCAGCCTTTCCTGC +
Preference number: 4 (lower is better)
Translates to: PEVEDPHKASEAQRGAAPTIRVD*DPSLSC
Trigger: GCAGGAAAGGCTGGGGTCCCAGTCCACCCTAATGGT...CGGAGCTGCCCCTCTCTGGGCCTCAGAGGCCTTATGAGGGTCCTCTACTTCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458235.7
CDS-3UTR TCA 90 bp CTTTGGGCCAGGACTCAGAGAGCCCCACTGACACATATGCCCATCTGTCTTGAAGCCCAGGGCGCTGAATaGTGGCCGGTCCTGTGGGCT +
Preference number: 4 (lower is better)
Translates to: LWARTQRAPLTHMPICLEAQGAE*WPVLWA
Trigger: AGCCCACAGGACCGGCCATCATTCAGCGCCCTGGGC...TTCAAGACAGATGGGCATATGTGTCAGTGGGGCTCTCTGAGTCCTGGCCCAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR TCA 90 bp CCTGAAGTAGAGGACCCTCATAAGGCCTCTGAGGCCCAGAGAGGGGCAGCTCCGGGCAGGAGAATCGCTTaGACCTGGGAAGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: PEVEDPHKASEAQRGAAPGRRIA*TWEAEV
Trigger: AACCTCTGCTTCCCAGGTTCAAGCGATTCTCCTGCC...CGGAGCTGCCCCTCTCTGGGCCTCAGAGGCCTTATGAGGGTCCTCTACTTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR GCA 90 bp GGTGTTCCTGAAGTAGAGGACCCTCATAAGGCCTCTGAGGCCCAGAGAGGGGCAACCAGGTCACTGCGGTaGTGGGCAAAGAGGTGCTCC +
Preference number: 4 (lower is better)
Translates to: GVPEVEDPHKASEAQRGATRSLR*WAKRCS
Trigger: GGAGCACCTCTTTGCCCAGCACCGCAGTGACCTGGT...TGCCCCTCTCTGGGCCTCAGAGGCCTTATGAGGGTCCTCTACTTCAGGAACACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR GCA 90 bp GGTGTTCCTGAAGTAGAGGACCCTCATAAGGCCTCTGAGGCCCAGAGAGGGGCACAGCAGCCTCGGCGGTaGCACCTCCTTGCAGAAGAA +
Preference number: 4 (lower is better)
Translates to: GVPEVEDPHKASEAQRGAQQPRR*HLLAEE
Trigger: TTCTTCTGCAAGGAGGTGGCACCGCCGAGGCTGCTG...TGCCCCTCTCTGGGCCTCAGAGGCCTTATGAGGGTCCTCTACTTCAGGAACACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR GCA 90 bp CCTGAAGTAGAGGACCCTCATAAGGCCTCTGAGGCCCAGAGAGGGGCAGCTCCGCCGGCTCATAGGCCATaGACTGTTGAATCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: PEVEDPHKASEAQRGAAPPAHRP*TVESAG
Trigger: CCCTGCTGATTCAACAGTGCATGGCCTATGAGCCGG...CGGAGCTGCCCCTCTCTGGGCCTCAGAGGCCTTATGAGGGTCCTCTACTTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR GCA 90 bp TCAGGGGGCCAGGGCTTAAGGGGTTGGGAAGATGCGAGAGTCTTAAATTTGGTTCGCGCGCGGTGCCGCTaGAGGAAGTCGCGCAAGCAG +
Preference number: 4 (lower is better)
Translates to: SGGQGLRGWEDARVLNLVRARCR*RKSRKQ
Trigger: CTGCTTGCGCGACTTCCTGCAGCGGCACCGCGCGCG...AACCAAATTTAAGACTCTCGCATCTTCCCAACCCCTTAAGCCCTGGCCCCCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR CCA 90 bp CCTGAAGTAGAGGACCCTCATAAGGCCTCTGAGGCCCAGAGAGGGGCAGCTCCGAGAGCAAAGAGGGAGTaGTACACAGGCAGGATGCCG +
Preference number: 4 (lower is better)
Translates to: PEVEDPHKASEAQRGAAPRAKRE*YTGRMP
Trigger: CGGCATCCTGCCTGTGTACCACTCCCTCTTTGCTCT...CGGAGCTGCCCCTCTCTGGGCCTCAGAGGCCTTATGAGGGTCCTCTACTTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR CCA 90 bp TGGGGGCCAGGATCCTCATCGGCCTCACACTCTAGCCTTTCTTCTCAGTACAGAGCCATGCACACGCCGTaGAGCAGCACGAGATGCCGG +
Preference number: 4 (lower is better)
Translates to: WGPGSSSASHSSLSSQYRAMHTP*SSTRCR
Trigger: CCGGCATCTCGTGCTGCTCCACGGCGTGTGCATGGC...TCTGTACTGAGAAGAAAGGCTAGAGTGTGAGGCCGATGAGGATCCTGGCCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS-3UTR CCA 90 bp GGTGTTCCTGAAGTAGAGGACCCTCATAAGGCCTCTGAGGCCCAGAGAGGGGCACCAGGGCACCAGGTGTaGGGTCTGAGAGGAGCTCAT +
Preference number: 4 (lower is better)
Translates to: GVPEVEDPHKASEAQRGAPGHQV*GLRGAH
Trigger: ATGAGCTCCTCTCAGACCCCACACCTGGTGCCCTGG...TGCCCCTCTCTGGGCCTCAGAGGCCTTATGAGGGTCCTCTACTTCAGGAACACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR CCA 90 bp GGTGTTCCTGAAGTAGAGGACCCTCATAAGGCCTCTGAGGCCCAGAGAGGGGCAAATGGGGCTCTGGCCTaGCTCGCGGACCACGTAGTA +
Preference number: 4 (lower is better)
Translates to: GVPEVEDPHKASEAQRGANGALA*LADHVV
Trigger: TACTACGTGGTCCGCGAGCCAGGCCAGAGCCCCATT...TGCCCCTCTCTGGGCCTCAGAGGCCTTATGAGGGTCCTCTACTTCAGGAACACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR CCA 90 bp CCTGAAGTAGAGGACCCTCATAAGGCCTCTGAGGCCCAGAGAGGGGCAGCTCCGGTGGTGTTTGCCCTCTaGGTGAGCAGTGAAGGCATG +
Preference number: 4 (lower is better)
Translates to: PEVEDPHKASEAQRGAAPVVFAL*VSSEGM
Trigger: CATGCCTTCACTGCTCACCCAGAGGGCAAACACCAC...CGGAGCTGCCCCTCTCTGGGCCTCAGAGGCCTTATGAGGGTCCTCTACTTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR CCA 90 bp CTTTGGGCCAGGACTCAGAGAGCCCCACTGACACATATGCCCATCTGTCTTGAAGCCCCAGGGCCAGAGTaGGGCTGGAGGGAAGGACAG +
Preference number: 4 (lower is better)
Translates to: LWARTQRAPLTHMPICLEAPGPE*GWREGQ
Trigger: CTGTCCTTCCCTCCAGCCCCACTCTGGCCCTGGGGC...TTCAAGACAGATGGGCATATGTGTCAGTGGGGCTCTCTGAGTCCTGGCCCAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458235.7
CDS-3UTR TCA 90 bp GGTGTTCCTGAAGTAGAGGACCCTCATAAGGCCTCTGAGGCCCAGAGAGGGGCACCCAGCACAGCTTCATaGGCTCGTGAACCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: GVPEVEDPHKASEAQRGAPSTAS*AREPQQ
Trigger: CTGCTGAGGTTCACGAGCTCATGAAGCTGTGCTGGG...TGCCCCTCTCTGGGCCTCAGAGGCCTTATGAGGGTCCTCTACTTCAGGAACACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR TCA 90 bp CCTGAAGTAGAGGACCCTCATAAGGCCTCTGAGGCCCAGAGAGGGGCAGCTCCGGAAAAGCTTTGCAGGTaGGGAGGAGCAGCAGAAGCT +
Preference number: 4 (lower is better)
Translates to: PEVEDPHKASEAQRGAAPEKLCR*GGAAEA
Trigger: AGCTTCTGCTGCTCCTCCTCACCTGCAAAGCTTTTC...CGGAGCTGCCCCTCTCTGGGCCTCAGAGGCCTTATGAGGGTCCTCTACTTCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458235.7
CDS-3UTR TCA 90 bp CTCAGGGGGCCAGGGCTTAAGGGGTTGGGAAGATGCGAGAGTCTTAAATTTGGTGCCCCCAAGGAACCCTaGGGTCAGGGGAGACAGCTG +
Preference number: 4 (lower is better)
Translates to: LRGPGLKGLGRCESLKFGAPKEP*GQGRQL
Trigger: CAGCTGTCTCCCCTGACCTCAGGGTTCCTTGGGGGC...ACCAAATTTAAGACTCTCGCATCTTCCCAACCCCTTAAGCCCTGGCCCCCTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000458235.7
CDS-3UTR GCA 90 bp TCAGGGGGCCAGGGCTTAAGGGGTTGGGAAGATGCGAGAGTCTTAAATTTGGTTCGCGGCGCAGGGCTCTaGGCACCGTCCTCCGAATAC +
Preference number: 4 (lower is better)
Translates to: SGGQGLRGWEDARVLNLVRGAGL*APSSEY
Trigger: GTATTCGGAGGACGGTGCGCAGAGCCCTGCGCCGCG...AACCAAATTTAAGACTCTCGCATCTTCCCAACCCCTTAAGCCCTGGCCCCCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR GCA 90 bp CTTTGGGCCAGGACTCAGAGAGCCCCACTGACACATATGCCCATCTGTCTTGAATTGGCCATGAGCGAGTaGCGGTCTGCCTGGCAGGCG +
Preference number: 4 (lower is better)
Translates to: LWARTQRAPLTHMPICLELAMSE*RSAWQA
Trigger: CGCCTGCCAGGCAGACCGGCACTCGCTCATGGCCAA...TTCAAGACAGATGGGCATATGTGTCAGTGGGGCTCTCTGAGTCCTGGCCCAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR GCA 90 bp CTCAGGGGGCCAGGGCTTAAGGGGTTGGGAAGATGCGAGAGTCTTAAATTTGGTATGGGGCCGTGGCACTaGTCGGCCACTTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: LRGPGLKGLGRCESLKFGMGPWH*SATSSS
Trigger: GCTGGAGGAAGTGGCCGAGCAGTGCCACGGCCCCAT...ACCAAATTTAAGACTCTCGCATCTTCCCAACCCCTTAAGCCCTGGCCCCCTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR GCA 90 bp GGTGTTCCTGAAGTAGAGGACCCTCATAAGGCCTCTGAGGCCCAGAGAGGGGCATGGCCCAGGTTCTCATaGCACTCCAGGCTGTCAGCA +
Preference number: 4 (lower is better)
Translates to: GVPEVEDPHKASEAQRGAWPRFS*HSRLSA
Trigger: TGCTGACAGCCTGGAGTGGCATGAGAACCTGGGCCA...TGCCCCTCTCTGGGCCTCAGAGGCCTTATGAGGGTCCTCTACTTCAGGAACACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR GCA 90 bp GGTGTTCCTGAAGTAGAGGACCCTCATAAGGCCTCTGAGGCCCAGAGAGGGGCAAGCTGTTTGACCACCTaGAGCTTCCAGCTGGCTGGC +
Preference number: 4 (lower is better)
Translates to: GVPEVEDPHKASEAQRGASCLTT*SFQLAG
Trigger: GCCAGCCAGCTGGAAGCTGCAGGTGGTCAAACAGCT...TGCCCCTCTCTGGGCCTCAGAGGCCTTATGAGGGTCCTCTACTTCAGGAACACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR GCA 90 bp GGTGTTCCTGAAGTAGAGGACCCTCATAAGGCCTCTGAGGCCCAGAGAGGGGCATCCAAGCTAAGTGTCTaGGCCTCCCGGAGACACTCG +
Preference number: 4 (lower is better)
Translates to: GVPEVEDPHKASEAQRGASKLSV*ASRRHS
Trigger: CGAGTGTCTCCGGGAGGCGCAGACACTTAGCTTGGA...TGCCCCTCTCTGGGCCTCAGAGGCCTTATGAGGGTCCTCTACTTCAGGAACACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR GCA 90 bp CTCAGGGGGCCAGGGCTTAAGGGGTTGGGAAGATGCGAGAGTCTTAAATTTGGTCAGCCCATCACGAGGTaGCAGGGCACCAGGTGTGGG +
Preference number: 4 (lower is better)
Translates to: LRGPGLKGLGRCESLKFGQPITR*QGTRCG
Trigger: CCCACACCTGGTGCCCTGGCACCTCGTGATGGGCTG...ACCAAATTTAAGACTCTCGCATCTTCCCAACCCCTTAAGCCCTGGCCCCCTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR GCA 90 bp TGGGGGCCAGGATCCTCATCGGCCTCACACTCTAGCCTTTCTTCTCAGTACAGATGGTCTGGCCCGCTGTaGTGCAGCTGTTTCACGGCC +
Preference number: 4 (lower is better)
Translates to: WGPGSSSASHSSLSSQYRWSGPL*CSCFTA
Trigger: GGCCGTGAAACAGCTGCAGCACAGCGGGCCAGACCA...TCTGTACTGAGAAGAAAGGCTAGAGTGTGAGGCCGATGAGGATCCTGGCCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS-3UTR GCA 90 bp GGTGTTCCTGAAGTAGAGGACCCTCATAAGGCCTCTGAGGCCCAGAGAGGGGCACTGGGAAGCAGAGGTTaGACTGAGCCGAGATCGCAC +
Preference number: 4 (lower is better)
Translates to: GVPEVEDPHKASEAQRGALGSRG*TEPRSH
Trigger: GTGCGATCTCGGCTCAGTGCAACCTCTGCTTCCCAG...TGCCCCTCTCTGGGCCTCAGAGGCCTTATGAGGGTCCTCTACTTCAGGAACACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR CCA 90 bp CTTTGGGCCAGGACTCAGAGAGCCCCACTGACACATATGCCCATCTGTCTTGAAGGATGCCGCTGGCCTTaGCAGCCTGCACGCACAGGT +
Preference number: 4 (lower is better)
Translates to: LWARTQRAPLTHMPICLEGCRWP*QPARTG
Trigger: ACCTGTGCGTGCAGGCTGCCAAGGCCAGCGGCATCC...TTCAAGACAGATGGGCATATGTGTCAGTGGGGCTCTCTGAGTCCTGGCCCAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR CCA 90 bp AATACTTGGGCTCTTAACCTCCTTACTCTGAGCCTTCTCACGCTTGGCATGCTGAGCTCTCCCGGCCGCTaGGCCTGCTCTCGCGCCATC +
Preference number: 4 (lower is better)
Translates to: NTWALNLLTLSLLTLGMLSSPGR*ACSRAI
Trigger: GATGGCGCGAGAGCAGGCCCAGCGGCCGGGAGAGCT...CAGCATGCCAAGCGTGAGAAGGCTCAGAGTAAGGAGGTTAAGAGCCCAAGTATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458235.7
CDS-3UTR CCA 90 bp CCAGGGCTTAAGGGGTTGGGAAGATGCGAGAGTCTTAAATTTGGTTCCTTGCTTCCAGGGAGGCCCACGTaGAAGGTCTCGGCGGCCCCG +
Preference number: 4 (lower is better)
Translates to: PGLKGLGRCESLKFGSLLPGRPT*KVSAAP
Trigger: CGGGGCCGCCGAGACCTTCCACGTGGGCCTCCCTGG...AAGCAAGGAACCAAATTTAAGACTCTCGCATCTTCCCAACCCCTTAAGCCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR CCA 90 bp GGTGTTCCTGAAGTAGAGGACCCTCATAAGGCCTCTGAGGCCCAGAGAGGGGCAAAGTCGCAGAAGGGCTaGAGGACCTCCTGTTCTCCC +
Preference number: 4 (lower is better)
Translates to: GVPEVEDPHKASEAQRGAKSQKG*RTSCSP
Trigger: GGGAGAACAGGAGGTCCTCCAGCCCTTCTGCGACTT...TGCCCCTCTCTGGGCCTCAGAGGCCTTATGAGGGTCCTCTACTTCAGGAACACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR CCA 90 bp CTTTGGGCCAGGACTCAGAGAGCCCCACTGACACATATGCCCATCTGTCTTGAACCTGCAGCTTCCAGCTaGCTGGCACCAGGTGGCCAC +
Preference number: 4 (lower is better)
Translates to: LWARTQRAPLTHMPICLEPAASS*LAPGGH
Trigger: GTGGCCACCTGGTGCCAGCCAGCTGGAAGCTGCAGG...TTCAAGACAGATGGGCATATGTGTCAGTGGGGCTCTCTGAGTCCTGGCCCAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR CCA 90 bp TTGCGTGAAAAGTTCCTGCCAGGTTTGGTGTCATCCCTTTGTGCCCCTTGTAGGAGAGAAGGAGGCGGCTaGCATCGAGGCGCGCGCGGT +
Preference number: 4 (lower is better)
Translates to: LREKFLPGLVSSLCAPCRREGGG*HRGARG
Trigger: ACCGCGCGCGCCTCGATGCCAGCCGCCTCCTTCTCT...CCTACAAGGGGCACAAAGGGATGACACCAAACCTGGCAGGAACTTTTCACGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458235.7
CDS-3UTR CCA 90 bp TCAGGGGGCCAGGGCTTAAGGGGTTGGGAAGATGCGAGAGTCTTAAATTTGGTTAGAGAAGGAGGCGGCTaGCATCGAGGCGCGCGCGGT +
Preference number: 4 (lower is better)
Translates to: SGGQGLRGWEDARVLNLVREGGG*HRGARG
Trigger: ACCGCGCGCGCCTCGATGCCAGCCGCCTCCTTCTCT...AACCAAATTTAAGACTCTCGCATCTTCCCAACCCCTTAAGCCCTGGCCCCCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR CCA 90 bp CTTTGGGCCAGGACTCAGAGAGCCCCACTGACACATATGCCCATCTGTCTTGAAGGGCCAGAGTGGGGCTaGAGGGAAGGACAGGGCTAC +
Preference number: 4 (lower is better)
Translates to: LWARTQRAPLTHMPICLEGPEWG*REGQGY
Trigger: GTAGCCCTGTCCTTCCCTCCAGCCCCACTCTGGCCC...TTCAAGACAGATGGGCATATGTGTCAGTGGGGCTCTCTGAGTCCTGGCCCAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458235.7
CDS-3UTR TCA 90 bp AGGGAAAGGAACTTGCCCACTGTCACACTGCATGGAAGGGGCAAAACTGTAGGCCCAACACGGCCAGGCTaGGACACTCACCCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: RERNLPTVTLHGRGKTVGPTRPG*DTHPAP
Trigger: AGGAGCAGGGTGAGTGTCTCAGCCTGGCCGTGTTGG...GCCTACAGTTTTGCCCCTTCCATGCAGTGTGACAGTGGGCAAGTTCCTTTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458235.7
CDS-3UTR TCA 90 bp TGGGGGCCAGGATCCTCATCGGCCTCACACTCTAGCCTTTCTTCTCAGTACAGATGGCAAAGTCCAGAGTaGTGGGGCCGTGGCACTGCT +
Preference number: 4 (lower is better)
Translates to: WGPGSSSASHSSLSSQYRWQSPE*WGRGTA
Trigger: AGCAGTGCCACGGCCCCATCACTCTGGACTTTGCCA...TCTGTACTGAGAAGAAAGGCTAGAGTGTGAGGCCGATGAGGATCCTGGCCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS-3UTR TCA 90 bp CCCAGAGAGGGAAAGGAACTTGCCCACTGTCACACTGCATGGAAGGGGCAAAACTGGGGCTGCGCCGGATaGGGCAGCCCTTATAATCAG +
Preference number: 4 (lower is better)
Translates to: PREGKELAHCHTAWKGQNWGCAG*GSPYNQ
Trigger: CTGATTATAAGGGCTGCCTCATCCGGCGCAGCCCCA...GTTTTGCCCCTTCCATGCAGTGTGACAGTGGGCAAGTTCCTTTCCCTCTCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000458235.7
CDS-3UTR TCA 90 bp GGTGTTCCTGAAGTAGAGGACCCTCATAAGGCCTCTGAGGCCCAGAGAGGGGCATGTCCTCCAGATAGTTaGGGGCGTAGGCCAGCTGTT +
Preference number: 4 (lower is better)
Translates to: GVPEVEDPHKASEAQRGACPPDS*GRRPAV
Trigger: AACAGCTGGCCTACGCCCTCAACTATCTGGAGGACA...TGCCCCTCTCTGGGCCTCAGAGGCCTTATGAGGGTCCTCTACTTCAGGAACACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR TCA 90 bp TTGCGTGAAAAGTTCCTGCCAGGTTTGGTGTCATCCCTTTGTGCCCCTTGTAGGTGGGCAGGTACTCCATaGCCAGCCGCAGGCTCTGGC +
Preference number: 4 (lower is better)
Translates to: LREKFLPGLVSSLCAPCRWAGTP*PAAGSG
Trigger: GCCAGAGCCTGCGGCTGGTCATGGAGTACCTGCCCA...CCTACAAGGGGCACAAAGGGATGACACCAAACCTGGCAGGAACTTTTCACGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458235.7
CDS-3UTR TCA 90 bp TCAGGGGGCCAGGGCTTAAGGGGTTGGGAAGATGCGAGAGTCTTAAATTTGGTTTGGGCAGGTACTCCATaGCCAGCCGCAGGCTCTGGC +
Preference number: 4 (lower is better)
Translates to: SGGQGLRGWEDARVLNLVWAGTP*PAAGSG
Trigger: GCCAGAGCCTGCGGCTGGTCATGGAGTACCTGCCCA...AACCAAATTTAAGACTCTCGCATCTTCCCAACCCCTTAAGCCCTGGCCCCCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR TCA 90 bp GGTGTTCCTGAAGTAGAGGACCCTCATAAGGCCTCTGAGGCCCAGAGAGGGGCAGGCAGGAGAATCGCTTaGACCTGGGAAGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: GVPEVEDPHKASEAQRGAGRRIA*TWEAEV
Trigger: AACCTCTGCTTCCCAGGTTCAAGCGATTCTCCTGCC...TGCCCCTCTCTGGGCCTCAGAGGCCTTATGAGGGTCCTCTACTTCAGGAACACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR GCA 90 bp TCAGGGGGCCAGGGCTTAAGGGGTTGGGAAGATGCGAGAGTCTTAAATTTGGTTCTGGCCTTGGCAGCCTaGACGCACAGGTCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: SGGQGLRGWEDARVLNLVLALAA*THRSSA
Trigger: GGCTGAGGACCTGTGCGTGCAGGCTGCCAAGGCCAG...AACCAAATTTAAGACTCTCGCATCTTCCCAACCCCTTAAGCCCTGGCCCCCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR GCA 90 bp TGGGGGCCAGGATCCTCATCGGCCTCACACTCTAGCCTTTCTTCTCAGTACAGAACCAGGTCACTGCGGTaGTGGGCAAAGAGGTGCTCC +
Preference number: 4 (lower is better)
Translates to: WGPGSSSASHSSLSSQYRTRSLR*WAKRCS
Trigger: GGAGCACCTCTTTGCCCAGCACCGCAGTGACCTGGT...TCTGTACTGAGAAGAAAGGCTAGAGTGTGAGGCCGATGAGGATCCTGGCCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS-3UTR GCA 90 bp CCCAGAGAGGGAAAGGAACTTGCCCACTGTCACACTGCATGGAAGGGGCAAAACCAGCAGCCTCGGCGGTaGCACCTCCTTGCAGAAGAA +
Preference number: 4 (lower is better)
Translates to: PREGKELAHCHTAWKGQNQQPRR*HLLAEE
Trigger: TTCTTCTGCAAGGAGGTGGCACCGCCGAGGCTGCTG...GTTTTGCCCCTTCCATGCAGTGTGACAGTGGGCAAGTTCCTTTCCCTCTCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458235.7
CDS-3UTR GCA 90 bp AGGGAAAGGAACTTGCCCACTGTCACACTGCATGGAAGGGGCAAAACTGTAGGCTCTGGCCCGCTGTGCTaGAGCTGTTTCACGGCCACC +
Preference number: 4 (lower is better)
Translates to: RERNLPTVTLHGRGKTVGSGPLC*SCFTAT
Trigger: GGTGGCCGTGAAACAGCTGCAGCACAGCGGGCCAGA...GCCTACAGTTTTGCCCCTTCCATGCAGTGTGACAGTGGGCAAGTTCCTTTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458235.7
CDS-3UTR GCA 90 bp CTCAGGGGGCCAGGGCTTAAGGGGTTGGGAAGATGCGAGAGTCTTAAATTTGGTTCTGGCCCGCTGTGCTaGAGCTGTTTCACGGCCACC +
Preference number: 4 (lower is better)
Translates to: LRGPGLKGLGRCESLKFGSGPLC*SCFTAT
Trigger: GGTGGCCGTGAAACAGCTGCAGCACAGCGGGCCAGA...ACCAAATTTAAGACTCTCGCATCTTCCCAACCCCTTAAGCCCTGGCCCCCTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR GCA 90 bp CTCAGGGGGCCAGGGCTTAAGGGGTTGGGAAGATGCGAGAGTCTTAAATTTGGTTGGTCTGGCCCGCTGTaGTGCAGCTGTTTCACGGCC +
Preference number: 4 (lower is better)
Translates to: LRGPGLKGLGRCESLKFGWSGPL*CSCFTA
Trigger: GGCCGTGAAACAGCTGCAGCACAGCGGGCCAGACCA...ACCAAATTTAAGACTCTCGCATCTTCCCAACCCCTTAAGCCCTGGCCCCCTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR CCA 90 bp CCAGTCAGAAAGTTGACCCTGCACAGCCAAGGGGTAAGCTCTGACCATTTTGCAGGATGCCGCTGGCCTTaGCAGCCTGCACGCACAGGT +
Preference number: 4 (lower is better)
Translates to: PVRKLTLHSQGVSSDHFAGCRWP*QPARTG
Trigger: ACCTGTGCGTGCAGGCTGCCAAGGCCAGCGGCATCC...TGCAAAATGGTCAGAGCTTACCCCTTGGCTGTGCAGGGTCAACTTTCTGACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458235.7
CDS-3UTR CCA 90 bp GGTGTTCCTGAAGTAGAGGACCCTCATAAGGCCTCTGAGGCCCAGAGAGGGGCAGAGGTGCTCCAGGACTaGCAGGTCAAGGATAGCACT +
Preference number: 4 (lower is better)
Translates to: GVPEVEDPHKASEAQRGAEVLQD*QVKDST
Trigger: AGTGCTATCCTTGACCTGCCAGTCCTGGAGCACCTC...TGCCCCTCTCTGGGCCTCAGAGGCCTTATGAGGGTCCTCTACTTCAGGAACACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR CCA 90 bp TGGGGGCCAGGATCCTCATCGGCCTCACACTCTAGCCTTTCTTCTCAGTACAGAAGGTCACTGCGGTGCTaGGCAAAGAGGTGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: WGPGSSSASHSSLSSQYRRSLRC*AKRCSR
Trigger: CCTGGAGCACCTCTTTGCCCAGCACCGCAGTGACCT...TCTGTACTGAGAAGAAAGGCTAGAGTGTGAGGCCGATGAGGATCCTGGCCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS-3UTR CCA 90 bp GGTGTTCCTGAAGTAGAGGACCCTCATAAGGCCTCTGAGGCCCAGAGAGGGGCAGGTTCCTTGCTTCTTTaGGCCAGGACTCAGAGAGCC +
Preference number: 4 (lower is better)
Translates to: GVPEVEDPHKASEAQRGAGSLLL*ARTQRA
Trigger: GGCTCTCTGAGTCCTGGCCCAAAGAAGCAAGGAACC...TGCCCCTCTCTGGGCCTCAGAGGCCTTATGAGGGTCCTCTACTTCAGGAACACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR TCA 90 bp CTTTGGGCCAGGACTCAGAGAGCCCCACTGACACATATGCCCATCTGTCTTGAAGGACAAGAGGCTGCATaGACGCTGAGGGATCAGGGG +
Preference number: 4 (lower is better)
Translates to: LWARTQRAPLTHMPICLEGQEAA*TLRDQG
Trigger: CCCCTGATCCCTCAGCGTTCATGCAGCCTCTTGTCC...TTCAAGACAGATGGGCATATGTGTCAGTGGGGCTCTCTGAGTCCTGGCCCAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR TCA 90 bp CTTTGGGCCAGGACTCAGAGAGCCCCACTGACACATATGCCCATCTGTCTTGAATGGCAAAGTCCAGAGTaGTGGGGCCGTGGCACTGCT +
Preference number: 4 (lower is better)
Translates to: LWARTQRAPLTHMPICLEWQSPE*WGRGTA
Trigger: AGCAGTGCCACGGCCCCATCACTCTGGACTTTGCCA...TTCAAGACAGATGGGCATATGTGTCAGTGGGGCTCTCTGAGTCCTGGCCCAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR TCA 90 bp AGGGAAAGGAACTTGCCCACTGTCACACTGCATGGAAGGGGCAAAACTGTAGGCGATGTGGGTGGGCTGTaGCCTCTCTGGACCACGATC +
Preference number: 4 (lower is better)
Translates to: RERNLPTVTLHGRGKTVGDVGGL*PLWTTI
Trigger: GATCGTGGTCCAGAGAGGTCACAGCCCACCCACATC...GCCTACAGTTTTGCCCCTTCCATGCAGTGTGACAGTGGGCAAGTTCCTTTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458235.7
CDS-3UTR TCA 90 bp CTTTGGGCCAGGACTCAGAGAGCCCCACTGACACATATGCCCATCTGTCTTGAAGATGTGGGTGGGCTGTaGCCTCTCTGGACCACGATC +
Preference number: 4 (lower is better)
Translates to: LWARTQRAPLTHMPICLEDVGGL*PLWTTI
Trigger: GATCGTGGTCCAGAGAGGTCACAGCCCACCCACATC...TTCAAGACAGATGGGCATATGTGTCAGTGGGGCTCTCTGAGTCCTGGCCCAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR TCA 90 bp CTTTGGGCCAGGACTCAGAGAGCCCCACTGACACATATGCCCATCTGTCTTGAAGGGCTGAACCAAGGATaGTGTGGGTGGGCTGTGACC +
Preference number: 4 (lower is better)
Translates to: LWARTQRAPLTHMPICLEGLNQG*CGWAVT
Trigger: GGTCACAGCCCACCCACATCATCCTTGGTTCAGCCC...TTCAAGACAGATGGGCATATGTGTCAGTGGGGCTCTCTGAGTCCTGGCCCAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR TCA 90 bp CTTTGGGCCAGGACTCAGAGAGCCCCACTGACACATATGCCCATCTGTCTTGAATTAACACAGCGGGGCTaGCCCCAGGGTCACTCAGCT +
Preference number: 4 (lower is better)
Translates to: LWARTQRAPLTHMPICLELTQRG*PQGHSA
Trigger: AGCTGAGTGACCCTGGGGTCAGCCCCGCTGTGTTAA...TTCAAGACAGATGGGCATATGTGTCAGTGGGGCTCTCTGAGTCCTGGCCCAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR TCA 90 bp CTCAGGGGGCCAGGGCTTAAGGGGTTGGGAAGATGCGAGAGTCTTAAATTTGGTTTAACACAGCGGGGCTaGCCCCAGGGTCACTCAGCT +
Preference number: 4 (lower is better)
Translates to: LRGPGLKGLGRCESLKFGLTQRG*PQGHSA
Trigger: AGCTGAGTGACCCTGGGGTCAGCCCCGCTGTGTTAA...ACCAAATTTAAGACTCTCGCATCTTCCCAACCCCTTAAGCCCTGGCCCCCTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR TCA 90 bp CCTGAAGTAGAGGACCCTCATAAGGCCTCTGAGGCCCAGAGAGGGGCAGCTCCGGAGGAGCTCATAGTCTaGAGAGATGAGGCTATTGAG +
Preference number: 4 (lower is better)
Translates to: PEVEDPHKASEAQRGAAPEELIV*RDEAIE
Trigger: CTCAATAGCCTCATCTCTTCAGACTATGAGCTCCTC...CGGAGCTGCCCCTCTCTGGGCCTCAGAGGCCTTATGAGGGTCCTCTACTTCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR TCA 90 bp CATGGAAGGGGCAAAACTGTAGGCTCCAATACTTGGGCTCTTAACCTCCTTACTGCCCAGGGCGCTGAATaGTGGCCGGTCCTGTGGGCT +
Preference number: 4 (lower is better)
Translates to: HGRGKTVGSNTWALNLLTAQGAE*WPVLWA
Trigger: AGCCCACAGGACCGGCCATCATTCAGCGCCCTGGGC...AGTAAGGAGGTTAAGAGCCCAAGTATTGGAGCCTACAGTTTTGCCCCTTCCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458235.7
CDS-3UTR TCA 90 bp TATGAGGGAAGGCTGCAAGGATGTGGTAGCTGGAGTTTTGAGAGATGGATAAGAGAGCCCCCTCTGTACTaGGGCCTCAGCCCAGCCCCC +
Preference number: 4 (lower is better)
Translates to: YEGRLQGCGSWSFERWIREPPLY*GLSPAP
Trigger: GGGGGCTGGGCTGAGGCCTCAGTACAGAGGGGGCTC...TCTTATCCATCTCTCAAAACTCCAGCTACCACATCCTTGCAGCCTTCCCTCATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458235.7
CDS-3UTR GCA 90 bp CATGGAAGGGGCAAAACTGTAGGCTCCAATACTTGGGCTCTTAACCTCCTTACTGCGGGCAGCAGCACATaGAGGGCACCAGCCTCCGTG +
Preference number: 4 (lower is better)
Translates to: HGRGKTVGSNTWALNLLTAGSST*RAPASV
Trigger: CACGGAGGCTGGTGCCCTGCATGTGCTGCTGCCCGC...AGTAAGGAGGTTAAGAGCCCAAGTATTGGAGCCTACAGTTTTGCCCCTTCCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458235.7
CDS-3UTR GCA 90 bp GGTTGGGAAGATGCGAGAGTCTTAAATTTGGTTCCTTGCTTCTTTGGGCCAGGAGCGGGCAGCAGCACATaGAGGGCACCAGCCTCCGTG +
Preference number: 4 (lower is better)
Translates to: GWEDARVLNLVPCFFGPGAGSST*RAPASV
Trigger: CACGGAGGCTGGTGCCCTGCATGTGCTGCTGCCCGC...TCCTGGCCCAAAGAAGCAAGGAACCAAATTTAAGACTCTCGCATCTTCCCAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR GCA 90 bp CCAGTCAGAAAGTTGACCCTGCACAGCCAAGGGGTAAGCTCTGACCATTTTGCAGGTACACAGGCAGGATaGCGCTGGCCTTGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: PVRKLTLHSQGVSSDHFAGTQAG*RWPWQP
Trigger: AGGCTGCCAAGGCCAGCGGCATCCTGCCTGTGTACC...TGCAAAATGGTCAGAGCTTACCCCTTGGCTGTGCAGGGTCAACTTTCTGACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458235.7
CDS-3UTR GCA 90 bp CTTTGGGCCAGGACTCAGAGAGCCCCACTGACACATATGCCCATCTGTCTTGAACACTGGCCAAATCCTTaGGTAGCCCGAAGCGGTGGC +
Preference number: 4 (lower is better)
Translates to: LWARTQRAPLTHMPICLEHWPNP*VARSGG
Trigger: GCCACCGCTTCGGGCTACGCAAGGATTTGGCCAGTG...TTCAAGACAGATGGGCATATGTGTCAGTGGGGCTCTCTGAGTCCTGGCCCAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR GCA 90 bp CTCAGGGGGCCAGGGCTTAAGGGGTTGGGAAGATGCGAGAGTCTTAAATTTGGTACCAGGTCACTGCGGTaGTGGGCAAAGAGGTGCTCC +
Preference number: 4 (lower is better)
Translates to: LRGPGLKGLGRCESLKFGTRSLR*WAKRCS
Trigger: GGAGCACCTCTTTGCCCAGCACCGCAGTGACCTGGT...ACCAAATTTAAGACTCTCGCATCTTCCCAACCCCTTAAGCCCTGGCCCCCTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR GCA 90 bp TGGGGGCCAGGATCCTCATCGGCCTCACACTCTAGCCTTTCTTCTCAGTACAGACCAACGCGCGGGGCCTaGTTGATGCTAATGTCTACG +
Preference number: 4 (lower is better)
Translates to: WGPGSSSASHSSLSSQYRPTRGA*LMLMST
Trigger: CGTAGACATTAGCATCAAGCAGGCCCCGCGCGTTGG...TCTGTACTGAGAAGAAAGGCTAGAGTGTGAGGCCGATGAGGATCCTGGCCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS-3UTR GCA 90 bp GGTTGGGAAGATGCGAGAGTCTTAAATTTGGTTCCTTGCTTCTTTGGGCCAGGAACAGTGACCAGGCGGTaGTCTCCGGCCGGGCCAACG +
Preference number: 4 (lower is better)
Translates to: GWEDARVLNLVPCFFGPGTVTRR*SPAGPT
Trigger: CGTTGGCCCGGCCGGAGAGCACCGCCTGGTCACTGT...TCCTGGCCCAAAGAAGCAAGGAACCAAATTTAAGACTCTCGCATCTTCCCAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR GCA 90 bp AATACTTGGGCTCTTAACCTCCTTACTCTGAGCCTTCTCACGCTTGGCATGCTGATGGGGCCGTGGCACTaGTCGGCCACTTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: NTWALNLLTLSLLTLGMLMGPWH*SATSSS
Trigger: GCTGGAGGAAGTGGCCGAGCAGTGCCACGGCCCCAT...CAGCATGCCAAGCGTGAGAAGGCTCAGAGTAAGGAGGTTAAGAGCCCAAGTATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458235.7
CDS-3UTR GCA 90 bp CTCAGGGGGCCAGGGCTTAAGGGGTTGGGAAGATGCGAGAGTCTTAAATTTGGTCCAGGAGGCGGAGCTTaGAGTGAGCCTAGATTGCGC +
Preference number: 4 (lower is better)
Translates to: LRGPGLKGLGRCESLKFGPGGGA*SEPRLR
Trigger: GCGCAATCTAGGCTCACTGCAAGCTCCGCCTCCTGG...ACCAAATTTAAGACTCTCGCATCTTCCCAACCCCTTAAGCCCTGGCCCCCTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458235.7
CDS-3UTR CCA 90 bp AGGGAAAGGAACTTGCCCACTGTCACACTGCATGGAAGGGGCAAAACTGTAGGCGGGCACCAGCCTCCGTaGACAAGAGGCTGCATGAAC +
Preference number: 4 (lower is better)
Translates to: RERNLPTVTLHGRGKTVGGHQPP*TRGCMN
Trigger: GTTCATGCAGCCTCTTGTCCACGGAGGCTGGTGCCC...GCCTACAGTTTTGCCCCTTCCATGCAGTGTGACAGTGGGCAAGTTCCTTTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458235.7
CDS-3UTR CCA 90 bp CTTTGGGCCAGGACTCAGAGAGCCCCACTGACACATATGCCCATCTGTCTTGAAGGGCACCAGCCTCCGTaGACAAGAGGCTGCATGAAC +
Preference number: 4 (lower is better)
Translates to: LWARTQRAPLTHMPICLEGHQPP*TRGCMN
Trigger: GTTCATGCAGCCTCTTGTCCACGGAGGCTGGTGCCC...TTCAAGACAGATGGGCATATGTGTCAGTGGGGCTCTCTGAGTCCTGGCCCAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR CCA 90 bp CATGGAAGGGGCAAAACTGTAGGCTCCAATACTTGGGCTCTTAACCTCCTTACTCAGGCAGGATGCCGCTaGCCTTGGCAGCCTGCACGC +
Preference number: 4 (lower is better)
Translates to: HGRGKTVGSNTWALNLLTQAGCR*PWQPAR
Trigger: GCGTGCAGGCTGCCAAGGCCAGCGGCATCCTGCCTG...AGTAAGGAGGTTAAGAGCCCAAGTATTGGAGCCTACAGTTTTGCCCCTTCCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458235.7
CDS-3UTR CCA 90 bp TGGGGGCCAGGATCCTCATCGGCCTCACACTCTAGCCTTTCTTCTCAGTACAGACTGTACAGCAGGACTTaGGTGCTGGCATCCTCCACG +
Preference number: 4 (lower is better)
Translates to: WGPGSSSASHSSLSSQYRLYSRT*VLASST
Trigger: CGTGGAGGATGCCAGCACCCAAGTCCTGCTGTACAG...TCTGTACTGAGAAGAAAGGCTAGAGTGTGAGGCCGATGAGGATCCTGGCCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS-3UTR CCA 90 bp CTCAGGGGGCCAGGGCTTAAGGGGTTGGGAAGATGCGAGAGTCTTAAATTTGGTCGTAGCCCGAAGCGGTaGCACTTCTCCAGCCCAAAC +
Preference number: 4 (lower is better)
Translates to: LRGPGLKGLGRCESLKFGRSPKR*HFSSPN
Trigger: GTTTGGGCTGGAGAAGTGCCACCGCTTCGGGCTACG...ACCAAATTTAAGACTCTCGCATCTTCCCAACCCCTTAAGCCCTGGCCCCCTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR CCA 90 bp CTCAGGGGGCCAGGGCTTAAGGGGTTGGGAAGATGCGAGAGTCTTAAATTTGGTAGTGCTGGGAGTCCGTaGTCAGCCGGAAGTAGCCGT +
Preference number: 4 (lower is better)
Translates to: LRGPGLKGLGRCESLKFGSAGSP*SAGSSR
Trigger: ACGGCTACTTCCGGCTGACCACGGACTCCCAGCACT...ACCAAATTTAAGACTCTCGCATCTTCCCAACCCCTTAAGCCCTGGCCCCCTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR CCA 90 bp CTTTGGGCCAGGACTCAGAGAGCCCCACTGACACATATGCCCATCTGTCTTGAAAGTGCTGGGAGTCCGTaGTCAGCCGGAAGTAGCCGT +
Preference number: 4 (lower is better)
Translates to: LWARTQRAPLTHMPICLESAGSP*SAGSSR
Trigger: ACGGCTACTTCCGGCTGACCACGGACTCCCAGCACT...TTCAAGACAGATGGGCATATGTGTCAGTGGGGCTCTCTGAGTCCTGGCCCAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR CCA 90 bp TTGCGTGAAAAGTTCCTGCCAGGTTTGGTGTCATCCCTTTGTGCCCCTTGTAGGAGAGTGATGGGGCCGTaGCACTGCTCGGCCACTTCC +
Preference number: 4 (lower is better)
Translates to: LREKFLPGLVSSLCAPCRRVMGP*HCSATS
Trigger: GGAAGTGGCCGAGCAGTGCCACGGCCCCATCACTCT...CCTACAAGGGGCACAAAGGGATGACACCAAACCTGGCAGGAACTTTTCACGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000458235.7
CDS-3UTR CCA 90 bp GGTGTTCCTGAAGTAGAGGACCCTCATAAGGCCTCTGAGGCCCAGAGAGGGGCAGAACCAAGGATGATGTaGGTGGGCTGTGACCTCTCT +
Preference number: 4 (lower is better)
Translates to: GVPEVEDPHKASEAQRGAEPRMM*VGCDLS
Trigger: AGAGAGGTCACAGCCCACCCACATCATCCTTGGTTC...TGCCCCTCTCTGGGCCTCAGAGGCCTTATGAGGGTCCTCTACTTCAGGAACACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR CCA 90 bp AATACTTGGGCTCTTAACCTCCTTACTCTGAGCCTTCTCACGCTTGGCATGCTGGCCATGCACACGCCGTaGAGCAGCACGAGATGCCGG +
Preference number: 4 (lower is better)
Translates to: NTWALNLLTLSLLTLGMLAMHTP*SSTRCR
Trigger: CCGGCATCTCGTGCTGCTCCACGGCGTGTGCATGGC...CAGCATGCCAAGCGTGAGAAGGCTCAGAGTAAGGAGGTTAAGAGCCCAAGTATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458235.7
CDS-3UTR CCA 90 bp CTCAGGGGGCCAGGGCTTAAGGGGTTGGGAAGATGCGAGAGTCTTAAATTTGGTCAGCTTCCAGCTGGCTaGCACCAGGTGGCCACGTTT +
Preference number: 4 (lower is better)
Translates to: LRGPGLKGLGRCESLKFGQLPAG*HQVATF
Trigger: AAACGTGGCCACCTGGTGCCAGCCAGCTGGAAGCTG...ACCAAATTTAAGACTCTCGCATCTTCCCAACCCCTTAAGCCCTGGCCCCCTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR CCA 90 bp CTTTGGGCCAGGACTCAGAGAGCCCCACTGACACATATGCCCATCTGTCTTGAACAGCTTCCAGCTGGCTaGCACCAGGTGGCCACGTTT +
Preference number: 4 (lower is better)
Translates to: LWARTQRAPLTHMPICLEQLPAG*HQVATF
Trigger: AAACGTGGCCACCTGGTGCCAGCCAGCTGGAAGCTG...TTCAAGACAGATGGGCATATGTGTCAGTGGGGCTCTCTGAGTCCTGGCCCAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR CCA 90 bp AGGGAAAGGAACTTGCCCACTGTCACACTGCATGGAAGGGGCAAAACTGTAGGCCCAGGGCACCAGGTGTaGGGTCTGAGAGGAGCTCAT +
Preference number: 4 (lower is better)
Translates to: RERNLPTVTLHGRGKTVGPGHQV*GLRGAH
Trigger: ATGAGCTCCTCTCAGACCCCACACCTGGTGCCCTGG...GCCTACAGTTTTGCCCCTTCCATGCAGTGTGACAGTGGGCAAGTTCCTTTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458235.7
CDS-3UTR TCA 90 bp TTGCGTGAAAAGTTCCTGCCAGGTTTGGTGTCATCCCTTTGTGCCCCTTGTAGGAGGCTGCATGAACGCTaGGGGATCAGGGGCGTCTCT +
Preference number: 4 (lower is better)
Translates to: LREKFLPGLVSSLCAPCRRLHER*GIRGVS
Trigger: AGAGACGCCCCTGATCCCTCAGCGTTCATGCAGCCT...CCTACAAGGGGCACAAAGGGATGACACCAAACCTGGCAGGAACTTTTCACGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000458235.7
CDS-3UTR TCA 90 bp TTGCGTGAAAAGTTCCTGCCAGGTTTGGTGTCATCCCTTTGTGCCCCTTGTAGGGGACAAGAGGCTGCATaGACGCTGAGGGATCAGGGG +
Preference number: 4 (lower is better)
Translates to: LREKFLPGLVSSLCAPCRGQEAA*TLRDQG
Trigger: CCCCTGATCCCTCAGCGTTCATGCAGCCTCTTGTCC...CCTACAAGGGGCACAAAGGGATGACACCAAACCTGGCAGGAACTTTTCACGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000458235.7
CDS-3UTR TCA 90 bp CTTTGGGCCAGGACTCAGAGAGCCCCACTGACACATATGCCCATCTGTCTTGAAGGCAGGCCTTGTAGCTaGCAGTCTTCAGCAGCTCTC +
Preference number: 4 (lower is better)
Translates to: LWARTQRAPLTHMPICLEGRPCS*QSSAAL
Trigger: GAGAGCTGCTGAAGACTGTCAGCTACAAGGCCTGCC...TTCAAGACAGATGGGCATATGTGTCAGTGGGGCTCTCTGAGTCCTGGCCCAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR TCA 90 bp TTGCGTGAAAAGTTCCTGCCAGGTTTGGTGTCATCCCTTTGTGCCCCTTGTAGGTGGCAAAGTCCAGAGTaGTGGGGCCGTGGCACTGCT +
Preference number: 4 (lower is better)
Translates to: LREKFLPGLVSSLCAPCRWQSPE*WGRGTA
Trigger: AGCAGTGCCACGGCCCCATCACTCTGGACTTTGCCA...CCTACAAGGGGCACAAAGGGATGACACCAAACCTGGCAGGAACTTTTCACGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000458235.7
CDS-3UTR TCA 90 bp GGTGTTCCTGAAGTAGAGGACCCTCATAAGGCCTCTGAGGCCCAGAGAGGGGCATCTGGACACAGACAGTaGGGAGGAAGCTGTCAAAGT +
Preference number: 4 (lower is better)
Translates to: GVPEVEDPHKASEAQRGASGHRQ*GGSCQS
Trigger: ACTTTGACAGCTTCCTCCTCACTGTCTGTGTCCAGA...TGCCCCTCTCTGGGCCTCAGAGGCCTTATGAGGGTCCTCTACTTCAGGAACACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR TCA 90 bp TCAGGGGGCCAGGGCTTAAGGGGTTGGGAAGATGCGAGAGTCTTAAATTTGGTTTGGGGCTGCGCCGGATaGGGCAGCCCTTATAATCAG +
Preference number: 4 (lower is better)
Translates to: SGGQGLRGWEDARVLNLVWGCAG*GSPYNQ
Trigger: CTGATTATAAGGGCTGCCTCATCCGGCGCAGCCCCA...AACCAAATTTAAGACTCTCGCATCTTCCCAACCCCTTAAGCCCTGGCCCCCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR TCA 90 bp CTCAGGGGGCCAGGGCTTAAGGGGTTGGGAAGATGCGAGAGTCTTAAATTTGGTCCCGGTAAATCTTGGTaGAGGACCCATGGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: LRGPGLKGLGRCESLKFGPGKSW*RTHGPG
Trigger: ACCTGGGCCATGGGTCCTTCACCAAGATTTACCGGG...ACCAAATTTAAGACTCTCGCATCTTCCCAACCCCTTAAGCCCTGGCCCCCTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR TCA 90 bp TGGGGGCCAGGATCCTCATCGGCCTCACACTCTAGCCTTTCTTCTCAGTACAGATGTCCTCCAGATAGTTaGGGGCGTAGGCCAGCTGTT +
Preference number: 4 (lower is better)
Translates to: WGPGSSSASHSSLSSQYRCPPDS*GRRPAV
Trigger: AACAGCTGGCCTACGCCCTCAACTATCTGGAGGACA...TCTGTACTGAGAAGAAAGGCTAGAGTGTGAGGCCGATGAGGATCCTGGCCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS-3UTR TCA 90 bp GGTGTTCCTGAAGTAGAGGACCCTCATAAGGCCTCTGAGGCCCAGAGAGGGGCAGCTGTGAGATGTACTTaGGGTGTCTCTCCTCGAAGA +
Preference number: 4 (lower is better)
Translates to: GVPEVEDPHKASEAQRGAAVRCT*GVSPRR
Trigger: TCTTCGAGGAGAGACACCTCAAGTACATCTCACAGC...TGCCCCTCTCTGGGCCTCAGAGGCCTTATGAGGGTCCTCTACTTCAGGAACACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR TCA 90 bp CTTTGGGCCAGGACTCAGAGAGCCCCACTGACACATATGCCCATCTGTCTTGAAAGCTTCATGAGCTCGTaGACCTCAGCAGGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: LWARTQRAPLTHMPICLESFMSS*TSAGQA
Trigger: TGCCTGCCCTGCTGAGGTTCACGAGCTCATGAAGCT...TTCAAGACAGATGGGCATATGTGTCAGTGGGGCTCTCTGAGTCCTGGCCCAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR TCA 90 bp CTCAGGGGGCCAGGGCTTAAGGGGTTGGGAAGATGCGAGAGTCTTAAATTTGGTCCTCTGGGTGAGCAGTaGAGGCATGAGTCTCACACC +
Preference number: 4 (lower is better)
Translates to: LRGPGLKGLGRCESLKFGPLGEQ*RHESHT
Trigger: GGTGTGAGACTCATGCCTTCACTGCTCACCCAGAGG...ACCAAATTTAAGACTCTCGCATCTTCCCAACCCCTTAAGCCCTGGCCCCCTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR TCA 90 bp CTCAGGGGGCCAGGGCTTAAGGGGTTGGGAAGATGCGAGAGTCTTAAATTTGGTTGCGGGCAGGAGCTATaGAAAGGACAGGGAGTGGTG +
Preference number: 4 (lower is better)
Translates to: LRGPGLKGLGRCESLKFGCGQEL*KGQGVV
Trigger: CACCACTCCCTGTCCTTTTCATAGCTCCTGCCCGCA...ACCAAATTTAAGACTCTCGCATCTTCCCAACCCCTTAAGCCCTGGCCCCCTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR TCA 90 bp CTCAGGGGGCCAGGGCTTAAGGGGTTGGGAAGATGCGAGAGTCTTAAATTTGGTCACCAGTCAGAAAGTTaGCCCTGCACAGCCAAGGGG +
Preference number: 4 (lower is better)
Translates to: LRGPGLKGLGRCESLKFGHQSES*PCTAKG
Trigger: CCCCTTGGCTGTGCAGGGTCAACTTTCTGACTGGTG...ACCAAATTTAAGACTCTCGCATCTTCCCAACCCCTTAAGCCCTGGCCCCCTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458235.7
CDS-3UTR TCA 90 bp TCAGGGGGCCAGGGCTTAAGGGGTTGGGAAGATGCGAGAGTCTTAAATTTGGTTCACTTGGAGGTGCCATaGGTGCAACTTGCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: SGGQGLRGWEDARVLNLVHLEVP*VQLAWG
Trigger: GCCCCAGGCAAGTTGCACTCATGGCACCTCCAAGTG...AACCAAATTTAAGACTCTCGCATCTTCCCAACCCCTTAAGCCCTGGCCCCCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000527670.5
CDS-3UTR GCA 90 bp CCAGGGCTTAAGGGGTTGGGAAGATGCGAGAGTCTTAAATTTGGTTCCTTGCTTCTGGCCTTGGCAGCCTaGACGCACAGGTCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: PGLKGLGRCESLKFGSLLLALAA*THRSSA
Trigger: GGCTGAGGACCTGTGCGTGCAGGCTGCCAAGGCCAG...AAGCAAGGAACCAAATTTAAGACTCTCGCATCTTCCCAACCCCTTAAGCCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR GCA 90 bp TCAGGGGGCCAGGGCTTAAGGGGTTGGGAAGATGCGAGAGTCTTAAATTTGGTTCACTGGCCAAATCCTTaGGTAGCCCGAAGCGGTGGC +
Preference number: 4 (lower is better)
Translates to: SGGQGLRGWEDARVLNLVHWPNP*VARSGG
Trigger: GCCACCGCTTCGGGCTACGCAAGGATTTGGCCAGTG...AACCAAATTTAAGACTCTCGCATCTTCCCAACCCCTTAAGCCCTGGCCCCCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR GCA 90 bp CTTTGGGCCAGGACTCAGAGAGCCCCACTGACACATATGCCCATCTGTCTTGAATGCTGGGCAAAGAGGTaGTCCAGGACTGGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: LWARTQRAPLTHMPICLECWAKR*SRTGRS
Trigger: TGACCTGCCAGTCCTGGAGCACCTCTTTGCCCAGCA...TTCAAGACAGATGGGCATATGTGTCAGTGGGGCTCTCTGAGTCCTGGCCCAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR GCA 90 bp CTCAGGGGGCCAGGGCTTAAGGGGTTGGGAAGATGCGAGAGTCTTAAATTTGGTCACTCACCAGGTCACTaGGGTGCTGGGCAAAGAGGT +
Preference number: 4 (lower is better)
Translates to: LRGPGLKGLGRCESLKFGHSPGH*GAGQRG
Trigger: ACCTCTTTGCCCAGCACCGCAGTGACCTGGTGAGTG...ACCAAATTTAAGACTCTCGCATCTTCCCAACCCCTTAAGCCCTGGCCCCCTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR GCA 90 bp AGGGAAAGGAACTTGCCCACTGTCACACTGCATGGAAGGGGCAAAACTGTAGGCCTGAGACACTCACCCTaGTCCTTGAGACTGAGGCCC +
Preference number: 4 (lower is better)
Translates to: RERNLPTVTLHGRGKTVGLRHSP*SLRLRP
Trigger: GGGCCTCAGTCTCAAGGAGCAGGGTGAGTGTCTCAG...GCCTACAGTTTTGCCCCTTCCATGCAGTGTGACAGTGGGCAAGTTCCTTTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458235.7
CDS-3UTR GCA 90 bp CTCAGGGGGCCAGGGCTTAAGGGGTTGGGAAGATGCGAGAGTCTTAAATTTGGTCTGAGACACTCACCCTaGTCCTTGAGACTGAGGCCC +
Preference number: 4 (lower is better)
Translates to: LRGPGLKGLGRCESLKFGLRHSP*SLRLRP
Trigger: GGGCCTCAGTCTCAAGGAGCAGGGTGAGTGTCTCAG...ACCAAATTTAAGACTCTCGCATCTTCCCAACCCCTTAAGCCCTGGCCCCCTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR GCA 90 bp TATGAGGGAAGGCTGCAAGGATGTGGTAGCTGGAGTTTTGAGAGATGGATAAGACGCGGCGCAGGGCTCTaGGCACCGTCCTCCGAATAC +
Preference number: 4 (lower is better)
Translates to: YEGRLQGCGSWSFERWIRRGAGL*APSSEY
Trigger: GTATTCGGAGGACGGTGCGCAGAGCCCTGCGCCGCG...TCTTATCCATCTCTCAAAACTCCAGCTACCACATCCTTGCAGCCTTCCCTCATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458235.7
CDS-3UTR GCA 90 bp CTCAGGGGGCCAGGGCTTAAGGGGTTGGGAAGATGCGAGAGTCTTAAATTTGGTGCGGTGCCACCTCCTTaGAGAAGAAGTGCTGGGAGT +
Preference number: 4 (lower is better)
Translates to: LRGPGLKGLGRCESLKFGAVPPP*RRSAGS
Trigger: ACTCCCAGCACTTCTTCTGCAAGGAGGTGGCACCGC...ACCAAATTTAAGACTCTCGCATCTTCCCAACCCCTTAAGCCCTGGCCCCCTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR GCA 90 bp TTGCGTGAAAAGTTCCTGCCAGGTTTGGTGTCATCCCTTTGTGCCCCTTGTAGGCAAAGTCCTGGGGGCTaGGGCGGAGAACATAGGAGC +
Preference number: 4 (lower is better)
Translates to: LREKFLPGLVSSLCAPCRQSPGG*GGEHRS
Trigger: GCTCCTATGTTCTCCGCCGCAGCCCCCAGGACTTTG...CCTACAAGGGGCACAAAGGGATGACACCAAACCTGGCAGGAACTTTTCACGCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000458235.7
CDS-3UTR GCA 90 bp CTCAGGGGGCCAGGGCTTAAGGGGTTGGGAAGATGCGAGAGTCTTAAATTTGGTGGAAGTGAGGGTCACTaGCACCCCATCTACGTGCAG +
Preference number: 4 (lower is better)
Translates to: LRGPGLKGLGRCESLKFGGSEGH*HPIYVQ
Trigger: CTGCACGTAGATGGGGTGGCAGTGACCCTCACTTCC...ACCAAATTTAAGACTCTCGCATCTTCCCAACCCCTTAAGCCCTGGCCCCCTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR GCA 90 bp CTTTGGGCCAGGACTCAGAGAGCCCCACTGACACATATGCCCATCTGTCTTGAATGGAGCAGCACGAGATaGCGGTACGACACTTGGCTC +
Preference number: 4 (lower is better)
Translates to: LWARTQRAPLTHMPICLEWSSTR*RYDTWL
Trigger: GAGCCAAGTGTCGTACCGGCATCTCGTGCTGCTCCA...TTCAAGACAGATGGGCATATGTGTCAGTGGGGCTCTCTGAGTCCTGGCCCAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR GCA 90 bp CTTTGGGCCAGGACTCAGAGAGCCCCACTGACACATATGCCCATCTGTCTTGAAAGCTGTTTGACCACCTaGAGCTTCCAGCTGGCTGGC +
Preference number: 4 (lower is better)
Translates to: LWARTQRAPLTHMPICLESCLTT*SFQLAG
Trigger: GCCAGCCAGCTGGAAGCTGCAGGTGGTCAAACAGCT...TTCAAGACAGATGGGCATATGTGTCAGTGGGGCTCTCTGAGTCCTGGCCCAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR GCA 90 bp AGGGAAAGGAACTTGCCCACTGTCACACTGCATGGAAGGGGCAAAACTGTAGGCTCCGGGCAGAGACATTaGCATGGGGCAGGCCTTTGT +
Preference number: 4 (lower is better)
Translates to: RERNLPTVTLHGRGKTVGSGQRH*HGAGLC
Trigger: ACAAAGGCCTGCCCCATGGCAATGTCTCTGCCCGGA...GCCTACAGTTTTGCCCCTTCCATGCAGTGTGACAGTGGGCAAGTTCCTTTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000458235.7
CDS-3UTR GCA 90 bp CTCAGGGGGCCAGGGCTTAAGGGGTTGGGAAGATGCGAGAGTCTTAAATTTGGTTCCGGGCAGAGACATTaGCATGGGGCAGGCCTTTGT +
Preference number: 4 (lower is better)
Translates to: LRGPGLKGLGRCESLKFGSGQRH*HGAGLC
Trigger: ACAAAGGCCTGCCCCATGGCAATGTCTCTGCCCGGA...ACCAAATTTAAGACTCTCGCATCTTCCCAACCCCTTAAGCCCTGGCCCCCTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR GCA 90 bp CCAGGGCTTAAGGGGTTGGGAAGATGCGAGAGTCTTAAATTTGGTTCCTTGCTTCAGCCCATCACGAGGTaGCAGGGCACCAGGTGTGGG +
Preference number: 4 (lower is better)
Translates to: PGLKGLGRCESLKFGSLLQPITR*QGTRCG
Trigger: CCCACACCTGGTGCCCTGGCACCTCGTGATGGGCTG...AAGCAAGGAACCAAATTTAAGACTCTCGCATCTTCCCAACCCCTTAAGCCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR GCA 90 bp AGGGAAAGGAACTTGCCCACTGTCACACTGCATGGAAGGGGCAAAACTGTAGGCCCACGCTGCCAAAGTTaGCCTTGCCCAGCTGTGAGA +
Preference number: 4 (lower is better)
Translates to: RERNLPTVTLHGRGKTVGPRCQS*PCPAVR
Trigger: TCTCACAGCTGGGCAAGGGCAACTTTGGCAGCGTGG...GCCTACAGTTTTGCCCCTTCCATGCAGTGTGACAGTGGGCAAGTTCCTTTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458235.7
CDS-3UTR GCA 90 bp CTCAGGGGGCCAGGGCTTAAGGGGTTGGGAAGATGCGAGAGTCTTAAATTTGGTCCACGCTGCCAAAGTTaGCCTTGCCCAGCTGTGAGA +
Preference number: 4 (lower is better)
Translates to: LRGPGLKGLGRCESLKFGPRCQS*PCPAVR
Trigger: TCTCACAGCTGGGCAAGGGCAACTTTGGCAGCGTGG...ACCAAATTTAAGACTCTCGCATCTTCCCAACCCCTTAAGCCCTGGCCCCCTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR GCA 90 bp AATACTTGGGCTCTTAACCTCCTTACTCTGAGCCTTCTCACGCTTGGCATGCTGTGGTCTGGCCCGCTGTaGTGCAGCTGTTTCACGGCC +
Preference number: 4 (lower is better)
Translates to: NTWALNLLTLSLLTLGMLWSGPL*CSCFTA
Trigger: GGCCGTGAAACAGCTGCAGCACAGCGGGCCAGACCA...CAGCATGCCAAGCGTGAGAAGGCTCAGAGTAAGGAGGTTAAGAGCCCAAGTATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458235.7
CDS-3UTR GCA 90 bp TCAGGGGGCCAGGGCTTAAGGGGTTGGGAAGATGCGAGAGTCTTAAATTTGGTTACTCGGCCGAGGGGCTaGAGCTTTTGTCGCAGTAGG +
Preference number: 4 (lower is better)
Translates to: SGGQGLRGWEDARVLNLVTRPRG*SFCRSR
Trigger: CCTACTGCGACAAAAGCTGCAGCCCCTCGGCCGAGT...AACCAAATTTAAGACTCTCGCATCTTCCCAACCCCTTAAGCCCTGGCCCCCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR GCA 90 bp AGGGAAAGGAACTTGCCCACTGTCACACTGCATGGAAGGGGCAAAACTGTAGGCCCGAGATCGCACCACTaGACTCCACCCTGGGTAACA +
Preference number: 4 (lower is better)
Translates to: RERNLPTVTLHGRGKTVGPRSHH*TPPWVT
Trigger: TGTTACCCAGGGTGGAGTGCAGTGGTGCGATCTCGG...GCCTACAGTTTTGCCCCTTCCATGCAGTGTGACAGTGGGCAAGTTCCTTTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458235.7
CDS-3UTR GCA 90 bp CTTTGGGCCAGGACTCAGAGAGCCCCACTGACACATATGCCCATCTGTCTTGAACCGAGATCGCACCACTaGACTCCACCCTGGGTAACA +
Preference number: 4 (lower is better)
Translates to: LWARTQRAPLTHMPICLEPRSHH*TPPWVT
Trigger: TGTTACCCAGGGTGGAGTGCAGTGGTGCGATCTCGG...TTCAAGACAGATGGGCATATGTGTCAGTGGGGCTCTCTGAGTCCTGGCCCAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR GCA 90 bp AGGGAAAGGAACTTGCCCACTGTCACACTGCATGGAAGGGGCAAAACTGTAGGCCTGGGAAGCAGAGGTTaGACTGAGCCGAGATCGCAC +
Preference number: 4 (lower is better)
Translates to: RERNLPTVTLHGRGKTVGLGSRG*TEPRSH
Trigger: GTGCGATCTCGGCTCAGTGCAACCTCTGCTTCCCAG...GCCTACAGTTTTGCCCCTTCCATGCAGTGTGACAGTGGGCAAGTTCCTTTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458235.7
CDS-3UTR GCA 90 bp AGGGAAAGGAACTTGCCCACTGTCACACTGCATGGAAGGGGCAAAACTGTAGGCGACCCCAGCCTTTCCTaGCCCCTTTCAGGATCCCAA +
Preference number: 4 (lower is better)
Translates to: RERNLPTVTLHGRGKTVGDPSLS*PLSGSQ
Trigger: TTGGGATCCTGAAAGGGGGCAGGAAAGGCTGGGGTC...GCCTACAGTTTTGCCCCTTCCATGCAGTGTGACAGTGGGCAAGTTCCTTTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000458235.7
CDS-3UTR GCA 90 bp CTCAGGGGGCCAGGGCTTAAGGGGTTGGGAAGATGCGAGAGTCTTAAATTTGGTTGGAGGTGCCATGAGTaGAACTTGCCTGGGGCACAG +
Preference number: 4 (lower is better)
Translates to: LRGPGLKGLGRCESLKFGWRCHE*NLPGAQ
Trigger: CTGTGCCCCAGGCAAGTTGCACTCATGGCACCTCCA...ACCAAATTTAAGACTCTCGCATCTTCCCAACCCCTTAAGCCCTGGCCCCCTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000527670.5
CDS-3UTR CCA 90 bp GGTGTTCCTGAAGTAGAGGACCCTCATAAGGCCTCTGAGGCCCAGAGAGGGGCAAGGTCCTCAGCCAAGTaGTCCCCAAAGGAGAAAGAT +
Preference number: 4 (lower is better)
Translates to: GVPEVEDPHKASEAQRGARSSAK*SPKEKD
Trigger: ATCTTTCTCCTTTGGGGACCACTTGGCTGAGGACCT...TGCCCCTCTCTGGGCCTCAGAGGCCTTATGAGGGTCCTCTACTTCAGGAACACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR CCA 90 bp CTCAGGGGGCCAGGGCTTAAGGGGTTGGGAAGATGCGAGAGTCTTAAATTTGGTAGGACAGGTCCTCCGTaGCCAGAGCAAAGAGGGAGT +
Preference number: 4 (lower is better)
Translates to: LRGPGLKGLGRCESLKFGRTGPP*PEQRGS
Trigger: ACTCCCTCTTTGCTCTGGCCACGGAGGACCTGTCCT...ACCAAATTTAAGACTCTCGCATCTTCCCAACCCCTTAAGCCCTGGCCCCCTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR CCA 90 bp CTTTGGGCCAGGACTCAGAGAGCCCCACTGACACATATGCCCATCTGTCTTGAAGCAGGACTTGGGTGCTaGCATCCTCCACGGAGAAGA +
Preference number: 4 (lower is better)
Translates to: LWARTQRAPLTHMPICLEAGLGC*HPPRRR
Trigger: TCTTCTCCGTGGAGGATGCCAGCACCCAAGTCCTGC...TTCAAGACAGATGGGCATATGTGTCAGTGGGGCTCTCTGAGTCCTGGCCCAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR CCA 90 bp AGGGAAAGGAACTTGCCCACTGTCACACTGCATGGAAGGGGCAAAACTGTAGGCCTGTACAGCAGGACTTaGGTGCTGGCATCCTCCACG +
Preference number: 4 (lower is better)
Translates to: RERNLPTVTLHGRGKTVGLYSRT*VLASST
Trigger: CGTGGAGGATGCCAGCACCCAAGTCCTGCTGTACAG...GCCTACAGTTTTGCCCCTTCCATGCAGTGTGACAGTGGGCAAGTTCCTTTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458235.7
CDS-3UTR CCA 90 bp CTCAGGGGGCCAGGGCTTAAGGGGTTGGGAAGATGCGAGAGTCTTAAATTTGGTCTGTACAGCAGGACTTaGGTGCTGGCATCCTCCACG +
Preference number: 4 (lower is better)
Translates to: LRGPGLKGLGRCESLKFGLYSRT*VLASST
Trigger: CGTGGAGGATGCCAGCACCCAAGTCCTGCTGTACAG...ACCAAATTTAAGACTCTCGCATCTTCCCAACCCCTTAAGCCCTGGCCCCCTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR CCA 90 bp TCAGGGGGCCAGGGCTTAAGGGGTTGGGAAGATGCGAGAGTCTTAAATTTGGTTACGAAGCTCAGGCCCTaGATCAGGTCGCGCAGGCTT +
Preference number: 4 (lower is better)
Translates to: SGGQGLRGWEDARVLNLVTKLRP*IRSRRL
Trigger: AAGCCTGCGCGACCTGATCCAGGGCCTGAGCTTCGT...AACCAAATTTAAGACTCTCGCATCTTCCCAACCCCTTAAGCCCTGGCCCCCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR CCA 90 bp CCTGAAGTAGAGGACCCTCATAAGGCCTCTGAGGCCCAGAGAGGGGCAGCTCCGTCGGCCTCTAAAATCTaGTTGTCTGTCCTGGTAACA +
Preference number: 4 (lower is better)
Translates to: PEVEDPHKASEAQRGAAPSASKI*LSVLVT
Trigger: TGTTACCAGGACAGACAACCAGATTTTAGAGGCCGA...CGGAGCTGCCCCTCTCTGGGCCTCAGAGGCCTTATGAGGGTCCTCTACTTCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR CCA 90 bp CTCAGGGGGCCAGGGCTTAAGGGGTTGGGAAGATGCGAGAGTCTTAAATTTGGTTTGCAGAAGAAGTGCTaGGAGTCCGTGGTCAGCCGG +
Preference number: 4 (lower is better)
Translates to: LRGPGLKGLGRCESLKFGLQKKC*ESVVSR
Trigger: CCGGCTGACCACGGACTCCCAGCACTTCTTCTGCAA...ACCAAATTTAAGACTCTCGCATCTTCCCAACCCCTTAAGCCCTGGCCCCCTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR CCA 90 bp TTGCGTGAAAAGTTCCTGCCAGGTTTGGTGTCATCCCTTTGTGCCCCTTGTAGGTCTCGAAGACTGCTGTaGGGTCGGCTGAGGCCAACC +
Preference number: 4 (lower is better)
Translates to: LREKFLPGLVSSLCAPCRSRRLL*GRLRPT
Trigger: GGTTGGCCTCAGCCGACCCCACAGCAGTCTTCGAGA...CCTACAAGGGGCACAAAGGGATGACACCAAACCTGGCAGGAACTTTTCACGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458235.7
CDS-3UTR CCA 90 bp GGTTGGGAAGATGCGAGAGTCTTAAATTTGGTTCCTTGCTTCTTTGGGCCAGGAGCCATGCACACGCCGTaGAGCAGCACGAGATGCCGG +
Preference number: 4 (lower is better)
Translates to: GWEDARVLNLVPCFFGPGAMHTP*SSTRCR
Trigger: CCGGCATCTCGTGCTGCTCCACGGCGTGTGCATGGC...TCCTGGCCCAAAGAAGCAAGGAACCAAATTTAAGACTCTCGCATCTTCCCAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR CCA 90 bp CCAGTCAGAAAGTTGACCCTGCACAGCCAAGGGGTAAGCTCTGACCATTTTGCAAATGGGGCTCTGGCCTaGCTCGCGGACCACGTAGTA +
Preference number: 4 (lower is better)
Translates to: PVRKLTLHSQGVSSDHFANGALA*LADHVV
Trigger: TACTACGTGGTCCGCGAGCCAGGCCAGAGCCCCATT...TGCAAAATGGTCAGAGCTTACCCCTTGGCTGTGCAGGGTCAACTTTCTGACTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000458235.7
CDS-3UTR CCA 90 bp CCCAGAGAGGGAAAGGAACTTGCCCACTGTCACACTGCATGGAAGGGGCAAAACGTGGTGTTTGCCCTCTaGGTGAGCAGTGAAGGCATG +
Preference number: 4 (lower is better)
Translates to: PREGKELAHCHTAWKGQNVVFAL*VSSEGM
Trigger: CATGCCTTCACTGCTCACCCAGAGGGCAAACACCAC...GTTTTGCCCCTTCCATGCAGTGTGACAGTGGGCAAGTTCCTTTCCCTCTCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458235.7
CDS-3UTR TCA 90 bp TTGCGTGAAAAGTTCCTGCCAGGTTTGGTGTCATCCCTTTGTGCCCCTTGTAGGAGCTTCATGAGCTCGTaGACCTCAGCAGGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: LREKFLPGLVSSLCAPCRSFMSS*TSAGQA
Trigger: TGCCTGCCCTGCTGAGGTTCACGAGCTCATGAAGCT...CCTACAAGGGGCACAAAGGGATGACACCAAACCTGGCAGGAACTTTTCACGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458235.7
CDS-3UTR TCA 90 bp AGGGAAAGGAACTTGCCCACTGTCACACTGCATGGAAGGGGCAAAACTGTAGGCCTCAGAGAGCCCCACTaGCACATATGCCCATCTGTC +
Preference number: 4 (lower is better)
Translates to: RERNLPTVTLHGRGKTVGLREPH*HICPSV
Trigger: GACAGATGGGCATATGTGTCAGTGGGGCTCTCTGAG...GCCTACAGTTTTGCCCCTTCCATGCAGTGTGACAGTGGGCAAGTTCCTTTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000458235.7
CDS-3UTR TCA 90 bp CTTTGGGCCAGGACTCAGAGAGCCCCACTGACACATATGCCCATCTGTCTTGAAACATTTAAAGCTACATaGGGGCCGGGCGCAGTGGCT +
Preference number: 4 (lower is better)
Translates to: LWARTQRAPLTHMPICLETFKAT*GPGAVA
Trigger: AGCCACTGCGCCCGGCCCTCATGTAGCTTTAAATGT...TTCAAGACAGATGGGCATATGTGTCAGTGGGGCTCTCTGAGTCCTGGCCCAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458235.7
CDS-3UTR GCA 90 bp TCAGGGGGCCAGGGCTTAAGGGGTTGGGAAGATGCGAGAGTCTTAAATTTGGTTTGGAGGTGCCATGAGTaGAACTTGCCTAGCGGGCAG +
Preference number: 4 (lower is better)
Translates to: SGGQGLRGWEDARVLNLVWRCHE*NLPSGQ
Trigger: CTGCCCGCTAGGCAAGTTGCACTCATGGCACCTCCA...AACCAAATTTAAGACTCTCGCATCTTCCCAACCCCTTAAGCCCTGGCCCCCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458235.7
CDS-3UTR GCA 90 bp CCAGTCAGAAAGTTGACCCTGCACAGCCAAGGGGTAAGCTCTGACCATTTTGCAACAGCAGGACTTGGGTaGTGGCATCCTCCACGGAGA +
Preference number: 4 (lower is better)
Translates to: PVRKLTLHSQGVSSDHFATAGLG*WHPPRR
Trigger: TCTCCGTGGAGGATGCCAGCACCCAAGTCCTGCTGT...TGCAAAATGGTCAGAGCTTACCCCTTGGCTGTGCAGGGTCAACTTTCTGACTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458235.7
CDS-3UTR GCA 90 bp TTGCGTGAAAAGTTCCTGCCAGGTTTGGTGTCATCCCTTTGTGCCCCTTGTAGGTGCTGGGCAAAGAGGTaGTCCAGGACTGGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: LREKFLPGLVSSLCAPCRCWAKR*SRTGRS
Trigger: TGACCTGCCAGTCCTGGAGCACCTCTTTGCCCAGCA...CCTACAAGGGGCACAAAGGGATGACACCAAACCTGGCAGGAACTTTTCACGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458235.7
CDS-3UTR GCA 90 bp CTCATAGGCACAGGTGTTCAGGAGTCTAATCTTCCCTCACCCTATAAGGCATTATTGGCCATGAGCGAGTaGCGGTCTGCCTGGCAGGCG +
Preference number: 4 (lower is better)
Translates to: LIGTGVQESNLPSPYKALLAMSE*RSAWQA
Trigger: CGCCTGCCAGGCAGACCGGCACTCGCTCATGGCCAA...TAATGCCTTATAGGGTGAGGGAAGATTAGACTCCTGAACACCTGTGCCTATGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS-3UTR GCA 90 bp TCAGGGGGCCAGGGCTTAAGGGGTTGGGAAGATGCGAGAGTCTTAAATTTGGTTCCAACGCGCGGGGCCTaGTTGATGCTAATGTCTACG +
Preference number: 4 (lower is better)
Translates to: SGGQGLRGWEDARVLNLVPTRGA*LMLMST
Trigger: CGTAGACATTAGCATCAAGCAGGCCCCGCGCGTTGG...AACCAAATTTAAGACTCTCGCATCTTCCCAACCCCTTAAGCCCTGGCCCCCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR GCA 90 bp CCAGTCAGAAAGTTGACCCTGCACAGCCAAGGGGTAAGCTCTGACCATTTTGCAGGAAGTGAGGGTCACTaGCACCCCATCTACGTGCAG +
Preference number: 4 (lower is better)
Translates to: PVRKLTLHSQGVSSDHFAGSEGH*HPIYVQ
Trigger: CTGCACGTAGATGGGGTGGCAGTGACCCTCACTTCC...TGCAAAATGGTCAGAGCTTACCCCTTGGCTGTGCAGGGTCAACTTTCTGACTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000458235.7
CDS-3UTR GCA 90 bp CCAGTCAGAAAGTTGACCCTGCACAGCCAAGGGGTAAGCTCTGACCATTTTGCATGGCCCAGGTTCTCATaGCACTCCAGGCTGTCAGCA +
Preference number: 4 (lower is better)
Translates to: PVRKLTLHSQGVSSDHFAWPRFS*HSRLSA
Trigger: TGCTGACAGCCTGGAGTGGCATGAGAACCTGGGCCA...TGCAAAATGGTCAGAGCTTACCCCTTGGCTGTGCAGGGTCAACTTTCTGACTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458235.7
CDS-3UTR GCA 90 bp GGTGTTCCTGAAGTAGAGGACCCTCATAAGGCCTCTGAGGCCCAGAGAGGGGCATCCATGCAGTTCTTGTaGTTGGCATCCATGACCTTC +
Preference number: 4 (lower is better)
Translates to: GVPEVEDPHKASEAQRGASMQFL*LASMTF
Trigger: GAAGGTCATGGATGCCAAGCACAAGAACTGCATGGA...TGCCCCTCTCTGGGCCTCAGAGGCCTTATGAGGGTCCTCTACTTCAGGAACACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR GCA 90 bp GGTGTTCCTGAAGTAGAGGACCCTCATAAGGCCTCTGAGGCCCAGAGAGGGGCAAGGTGTACAAATTCCTaGACCATGGTGCTGTCTCCA +
Preference number: 4 (lower is better)
Translates to: GVPEVEDPHKASEAQRGARCTNS*TMVLSP
Trigger: TGGAGACAGCACCATGGTGCAGGAATTTGTACACCT...TGCCCCTCTCTGGGCCTCAGAGGCCTTATGAGGGTCCTCTACTTCAGGAACACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR GCA 90 bp TTGCGTGAAAAGTTCCTGCCAGGTTTGGTGTCATCCCTTTGTGCCCCTTGTAGGTCCAAGCTAAGTGTCTaGGCCTCCCGGAGACACTCG +
Preference number: 4 (lower is better)
Translates to: LREKFLPGLVSSLCAPCRSKLSV*ASRRHS
Trigger: CGAGTGTCTCCGGGAGGCGCAGACACTTAGCTTGGA...CCTACAAGGGGCACAAAGGGATGACACCAAACCTGGCAGGAACTTTTCACGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458235.7
CDS-3UTR GCA 90 bp CCTGAAGTAGAGGACCCTCATAAGGCCTCTGAGGCCCAGAGAGGGGCAGCTCCGGAAATCACTGTGCAGTaGTTTGAGGATCTGAATCTC +
Preference number: 4 (lower is better)
Translates to: PEVEDPHKASEAQRGAAPEITVQ*FEDLNL
Trigger: GAGATTCAGATCCTCAAAGCACTGCACAGTGATTTC...CGGAGCTGCCCCTCTCTGGGCCTCAGAGGCCTTATGAGGGTCCTCTACTTCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR GCA 90 bp CTCAGGGGGCCAGGGCTTAAGGGGTTGGGAAGATGCGAGAGTCTTAAATTTGGTAGCGATCTTGACGTGTaGCTCGCTCTCCACGAGGAT +
Preference number: 4 (lower is better)
Translates to: LRGPGLKGLGRCESLKFGSDLDV*LALHED
Trigger: ATCCTCGTGGAGAGCGAGGCACACGTCAAGATCGCT...ACCAAATTTAAGACTCTCGCATCTTCCCAACCCCTTAAGCCCTGGCCCCCTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR GCA 90 bp CCTGAAGTAGAGGACCCTCATAAGGCCTCTGAGGCCCAGAGAGGGGCAGCTCCGTTAAATTTGGTTCCTTaGTTCTTTGGGCCAGGACTC +
Preference number: 4 (lower is better)
Translates to: PEVEDPHKASEAQRGAAPLNLVP*FFGPGL
Trigger: GAGTCCTGGCCCAAAGAAGCAAGGAACCAAATTTAA...CGGAGCTGCCCCTCTCTGGGCCTCAGAGGCCTTATGAGGGTCCTCTACTTCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR CCA 90 bp CTTTGGGCCAGGACTCAGAGAGCCCCACTGACACATATGCCCATCTGTCTTGAAGGGCGTCTCTTCACTTaGAGGTGCCATGAGTGCAAC +
Preference number: 4 (lower is better)
Translates to: LWARTQRAPLTHMPICLEGRLFT*RCHECN
Trigger: GTTGCACTCATGGCACCTCCAAGTGAAGAGACGCCC...TTCAAGACAGATGGGCATATGTGTCAGTGGGGCTCTCTGAGTCCTGGCCCAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR CCA 90 bp AATACTTGGGCTCTTAACCTCCTTACTCTGAGCCTTCTCACGCTTGGCATGCTGCGTAGCCCGAAGCGGTaGCACTTCTCCAGCCCAAAC +
Preference number: 4 (lower is better)
Translates to: NTWALNLLTLSLLTLGMLRSPKR*HFSSPN
Trigger: GTTTGGGCTGGAGAAGTGCCACCGCTTCGGGCTACG...CAGCATGCCAAGCGTGAGAAGGCTCAGAGTAAGGAGGTTAAGAGCCCAAGTATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458235.7
CDS-3UTR CCA 90 bp CTTTGGGCCAGGACTCAGAGAGCCCCACTGACACATATGCCCATCTGTCTTGAAGAGGTGCTCCAGGACTaGCAGGTCAAGGATAGCACT +
Preference number: 4 (lower is better)
Translates to: LWARTQRAPLTHMPICLEEVLQD*QVKDST
Trigger: AGTGCTATCCTTGACCTGCCAGTCCTGGAGCACCTC...TTCAAGACAGATGGGCATATGTGTCAGTGGGGCTCTCTGAGTCCTGGCCCAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR CCA 90 bp CCAGGGCTTAAGGGGTTGGGAAGATGCGAGAGTCTTAAATTTGGTTCCTTGCTTAGAGTGATGGGGCCGTaGCACTGCTCGGCCACTTCC +
Preference number: 4 (lower is better)
Translates to: PGLKGLGRCESLKFGSLLRVMGP*HCSATS
Trigger: GGAAGTGGCCGAGCAGTGCCACGGCCCCATCACTCT...AAGCAAGGAACCAAATTTAAGACTCTCGCATCTTCCCAACCCCTTAAGCCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR CCA 90 bp CTTTGGGCCAGGACTCAGAGAGCCCCACTGACACATATGCCCATCTGTCTTGAATGCCGGTACGACACTTaGCTCATCAAGCTCGCTGCT +
Preference number: 4 (lower is better)
Translates to: LWARTQRAPLTHMPICLECRYDT*LIKLAA
Trigger: AGCAGCGAGCTTGATGAGCCAAGTGTCGTACCGGCA...TTCAAGACAGATGGGCATATGTGTCAGTGGGGCTCTCTGAGTCCTGGCCCAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR CCA 90 bp TCAGGGGGCCAGGGCTTAAGGGGTTGGGAAGATGCGAGAGTCTTAAATTTGGTTCTGGCTGGCACCAGGTaGCCACGTTTTCGCAGATAC +
Preference number: 4 (lower is better)
Translates to: SGGQGLRGWEDARVLNLVLAGTR*PRFRRY
Trigger: GTATCTGCGAAAACGTGGCCACCTGGTGCCAGCCAG...AACCAAATTTAAGACTCTCGCATCTTCCCAACCCCTTAAGCCCTGGCCCCCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR CCA 90 bp TGGGGGCCAGGATCCTCATCGGCCTCACACTCTAGCCTTTCTTCTCAGTACAGATCTCCTCGAAGATCGTaGGGTCTTGGCAGGCATAGA +
Preference number: 4 (lower is better)
Translates to: WGPGSSSASHSSLSSQYRSPRRS*GLGRHR
Trigger: TCTATGCCTGCCAAGACCCCACGATCTTCGAGGAGA...TCTGTACTGAGAAGAAAGGCTAGAGTGTGAGGCCGATGAGGATCCTGGCCCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS-3UTR CCA 90 bp CATGGAAGGGGCAAAACTGTAGGCTCCAATACTTGGGCTCTTAACCTCCTTACTCAGAAAATGGGGCTCTaGCCTGGCTCGCGGACCACG +
Preference number: 4 (lower is better)
Translates to: HGRGKTVGSNTWALNLLTQKMGL*PGSRTT
Trigger: CGTGGTCCGCGAGCCAGGCCAGAGCCCCATTTTCTG...AGTAAGGAGGTTAAGAGCCCAAGTATTGGAGCCTACAGTTTTGCCCCTTCCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000458235.7
CDS-3UTR CCA 90 bp TGGGGGCCAGGATCCTCATCGGCCTCACACTCTAGCCTTTCTTCTCAGTACAGACTCCAGACGTCTGACTaGCGAGAGAAGATGTTGTCC +
Preference number: 4 (lower is better)
Translates to: WGPGSSSASHSSLSSQYRLQTSD*REKMLS
Trigger: GGACAACATCTTCTCTCGCCAGTCAGACGTCTGGAG...TCTGTACTGAGAAGAAAGGCTAGAGTGTGAGGCCGATGAGGATCCTGGCCCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS-3UTR CCA 90 bp CATGGAAGGGGCAAAACTGTAGGCTCCAATACTTGGGCTCTTAACCTCCTTACTCACAGCATGTCCAGCTaGGGGCCCAGGGCGCTGAAT +
Preference number: 4 (lower is better)
Translates to: HGRGKTVGSNTWALNLLTHSMSS*GPRALN
Trigger: ATTCAGCGCCCTGGGCCCCCAGCTGGACATGCTGTG...AGTAAGGAGGTTAAGAGCCCAAGTATTGGAGCCTACAGTTTTGCCCCTTCCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000458235.7
CDS-3UTR TCA 90 bp CCAGGGCTTAAGGGGTTGGGAAGATGCGAGAGTCTTAAATTTGGTTCCTTGCTTAGGCTGCATGAACGCTaGGGGATCAGGGGCGTCTCT +
Preference number: 4 (lower is better)
Translates to: PGLKGLGRCESLKFGSLLRLHER*GIRGVS
Trigger: AGAGACGCCCCTGATCCCTCAGCGTTCATGCAGCCT...AAGCAAGGAACCAAATTTAAGACTCTCGCATCTTCCCAACCCCTTAAGCCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR TCA 90 bp CATGGAAGGGGCAAAACTGTAGGCTCCAATACTTGGGCTCTTAACCTCCTTACTGGGCTGAACCAAGGATaGTGTGGGTGGGCTGTGACC +
Preference number: 4 (lower is better)
Translates to: HGRGKTVGSNTWALNLLTGLNQG*CGWAVT
Trigger: GGTCACAGCCCACCCACATCATCCTTGGTTCAGCCC...AGTAAGGAGGTTAAGAGCCCAAGTATTGGAGCCTACAGTTTTGCCCCTTCCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458235.7
CDS-3UTR TCA 90 bp CTCAGGGGGCCAGGGCTTAAGGGGTTGGGAAGATGCGAGAGTCTTAAATTTGGTCGCTGCTTCCAGGAATaGCTCCATGCAGTTCTTGTG +
Preference number: 4 (lower is better)
Translates to: LRGPGLKGLGRCESLKFGRCFQE*LHAVLV
Trigger: CACAAGAACTGCATGGAGTCATTCCTGGAAGCAGCG...ACCAAATTTAAGACTCTCGCATCTTCCCAACCCCTTAAGCCCTGGCCCCCTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR TCA 90 bp CTTTGGGCCAGGACTCAGAGAGCCCCACTGACACATATGCCCATCTGTCTTGAACACTGTGCAGTGCTTTaGGGATCTGAATCTCCCGCT +
Preference number: 4 (lower is better)
Translates to: LWARTQRAPLTHMPICLEHCAVL*GSESPA
Trigger: AGCGGGAGATTCAGATCCTCAAAGCACTGCACAGTG...TTCAAGACAGATGGGCATATGTGTCAGTGGGGCTCTCTGAGTCCTGGCCCAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR TCA 90 bp AATACTTGGGCTCTTAACCTCCTTACTCTGAGCCTTCTCACGCTTGGCATGCTGCGAAGTCAGCGATCTTaGCGTGTGCCTCGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: NTWALNLLTLSLLTLGMLRSQRS*RVPRSP
Trigger: TGGAGAGCGAGGCACACGTCAAGATCGCTGACTTCG...CAGCATGCCAAGCGTGAGAAGGCTCAGAGTAAGGAGGTTAAGAGCCCAAGTATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458235.7
CDS-3UTR TCA 90 bp TGGGGGCCAGGATCCTCATCGGCCTCACACTCTAGCCTTTCTTCTCAGTACAGATTTTGTCGCAGTAGGTaGAGAGCTCGTACAGGACGA +
Preference number: 4 (lower is better)
Translates to: WGPGSSSASHSSLSSQYRFCRSR*RARTGR
Trigger: TCGTCCTGTACGAGCTCTTCACCTACTGCGACAAAA...TCTGTACTGAGAAGAAAGGCTAGAGTGTGAGGCCGATGAGGATCCTGGCCCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS-3UTR TCA 90 bp CTTTGGGCCAGGACTCAGAGAGCCCCACTGACACATATGCCCATCTGTCTTGAAGACAGGTGGGAAAACTaGAGCCCTAGGACACTCAGA +
Preference number: 4 (lower is better)
Translates to: LWARTQRAPLTHMPICLEDRWEN*SPRTLR
Trigger: TCTGAGTGTCCTAGGGCTTCAGTTTTCCCACCTGTC...TTCAAGACAGATGGGCATATGTGTCAGTGGGGCTCTCTGAGTCCTGGCCCAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458235.7
CDS-3UTR GCA 90 bp CCAGGGCTTAAGGGGTTGGGAAGATGCGAGAGTCTTAAATTTGGTTCCTTGCTTGCCATGAGTGCAACTTaGCTAGCGGGCAGGGACCCT +
Preference number: 4 (lower is better)
Translates to: PGLKGLGRCESLKFGSLLAMSAT*LAGRDP
Trigger: AGGGTCCCTGCCCGCTAGGCAAGTTGCACTCATGGC...AAGCAAGGAACCAAATTTAAGACTCTCGCATCTTCCCAACCCCTTAAGCCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458235.7
CDS-3UTR GCA 90 bp TCAGGGGGCCAGGGCTTAAGGGGTTGGGAAGATGCGAGAGTCTTAAATTTGGTTCCGTGGACAAGAGGCTaGATGAACGCTGAGGGATCA +
Preference number: 4 (lower is better)
Translates to: SGGQGLRGWEDARVLNLVPWTRG*MNAEGS
Trigger: TGATCCCTCAGCGTTCATGCAGCCTCTTGTCCACGG...AACCAAATTTAAGACTCTCGCATCTTCCCAACCCCTTAAGCCCTGGCCCCCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR GCA 90 bp CTCATAGGCACAGGTGTTCAGGAGTCTAATCTTCCCTCACCCTATAAGGCATTAGGTACACAGGCAGGATaGCGCTGGCCTTGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: LIGTGVQESNLPSPYKALGTQAG*RWPWQP
Trigger: AGGCTGCCAAGGCCAGCGGCATCCTGCCTGTGTACC...TAATGCCTTATAGGGTGAGGGAAGATTAGACTCCTGAACACCTGTGCCTATGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS-3UTR GCA 90 bp TCAGGGGGCCAGGGCTTAAGGGGTTGGGAAGATGCGAGAGTCTTAAATTTGGTTTCCTTGCAGAAGAAGTaGTGGGAGTCCGTGGTCAGC +
Preference number: 4 (lower is better)
Translates to: SGGQGLRGWEDARVLNLVSLQKK*WESVVS
Trigger: GCTGACCACGGACTCCCAGCACTTCTTCTGCAAGGA...AACCAAATTTAAGACTCTCGCATCTTCCCAACCCCTTAAGCCCTGGCCCCCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR GCA 90 bp GGTTGGGAAGATGCGAGAGTCTTAAATTTGGTTCCTTGCTTCTTTGGGCCAGGACAAAGTCCTGGGGGCTaGGGCGGAGAACATAGGAGC +
Preference number: 4 (lower is better)
Translates to: GWEDARVLNLVPCFFGPGQSPGG*GGEHRS
Trigger: GCTCCTATGTTCTCCGCCGCAGCCCCCAGGACTTTG...TCCTGGCCCAAAGAAGCAAGGAACCAAATTTAAGACTCTCGCATCTTCCCAACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR GCA 90 bp TTGCGTGAAAAGTTCCTGCCAGGTTTGGTGTCATCCCTTTGTGCCCCTTGTAGGAGCGATCTTGACGTGTaGCTCGCTCTCCACGAGGAT +
Preference number: 4 (lower is better)
Translates to: LREKFLPGLVSSLCAPCRSDLDV*LALHED
Trigger: ATCCTCGTGGAGAGCGAGGCACACGTCAAGATCGCT...CCTACAAGGGGCACAAAGGGATGACACCAAACCTGGCAGGAACTTTTCACGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458235.7
CDS-3UTR GCA 90 bp CTTTGGGCCAGGACTCAGAGAGCCCCACTGACACATATGCCCATCTGTCTTGAATTCTCACGCTTGGCATaGTGTTCCCTCTGCCAGGAA +
Preference number: 4 (lower is better)
Translates to: LWARTQRAPLTHMPICLEFSRLA*CSLCQE
Trigger: TTCCTGGCAGAGGGAACAGCATGCCAAGCGTGAGAA...TTCAAGACAGATGGGCATATGTGTCAGTGGGGCTCTCTGAGTCCTGGCCCAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458235.7
CDS-3UTR CCA 90 bp TCAGGGGGCCAGGGCTTAAGGGGTTGGGAAGATGCGAGAGTCTTAAATTTGGTTGGGCGTCTCTTCACTTaGAGGTGCCATGAGTGCAAC +
Preference number: 4 (lower is better)
Translates to: SGGQGLRGWEDARVLNLVGRLFT*RCHECN
Trigger: GTTGCACTCATGGCACCTCCAAGTGAAGAGACGCCC...AACCAAATTTAAGACTCTCGCATCTTCCCAACCCCTTAAGCCCTGGCCCCCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR CCA 90 bp CATGGAAGGGGCAAAACTGTAGGCTCCAATACTTGGGCTCTTAACCTCCTTACTAGGTCACTGCGGTGCTaGGCAAAGAGGTGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: HGRGKTVGSNTWALNLLTRSLRC*AKRCSR
Trigger: CCTGGAGCACCTCTTTGCCCAGCACCGCAGTGACCT...AGTAAGGAGGTTAAGAGCCCAAGTATTGGAGCCTACAGTTTTGCCCCTTCCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458235.7
CDS-3UTR CCA 90 bp CAGGAGTCTAATCTTCCCTCACCCTATAAGGCATTACTATTCTCATTTTGGAAACCAGGGAGGCCCACGTaGAAGGTCTCGGCGGCCCCG +
Preference number: 4 (lower is better)
Translates to: QESNLPSPYKALLFSFWKPGRPT*KVSAAP
Trigger: CGGGGCCGCCGAGACCTTCCACGTGGGCCTCCCTGG...TTTCCAAAATGAGAATAGTAATGCCTTATAGGGTGAGGGAAGATTAGACTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS-3UTR CCA 90 bp GGTTGGGAAGATGCGAGAGTCTTAAATTTGGTTCCTTGCTTCTTTGGGCCAGGATCTCGAAGACTGCTGTaGGGTCGGCTGAGGCCAACC +
Preference number: 4 (lower is better)
Translates to: GWEDARVLNLVPCFFGPGSRRLL*GRLRPT
Trigger: GGTTGGCCTCAGCCGACCCCACAGCAGTCTTCGAGA...TCCTGGCCCAAAGAAGCAAGGAACCAAATTTAAGACTCTCGCATCTTCCCAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR CCA 90 bp TCAGGGGGCCAGGGCTTAAGGGGTTGGGAAGATGCGAGAGTCTTAAATTTGGTTTTGGTGAAGGACCCATaGCCCAGGTTCTCATGCCAC +
Preference number: 4 (lower is better)
Translates to: SGGQGLRGWEDARVLNLVLVKDP*PRFSCH
Trigger: GTGGCATGAGAACCTGGGCCATGGGTCCTTCACCAA...AACCAAATTTAAGACTCTCGCATCTTCCCAACCCCTTAAGCCCTGGCCCCCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR CCA 90 bp CTTTGGGCCAGGACTCAGAGAGCCCCACTGACACATATGCCCATCTGTCTTGAATCTCCTCGAAGATCGTaGGGTCTTGGCAGGCATAGA +
Preference number: 4 (lower is better)
Translates to: LWARTQRAPLTHMPICLESPRRS*GLGRHR
Trigger: TCTATGCCTGCCAAGACCCCACGATCTTCGAGGAGA...TTCAAGACAGATGGGCATATGTGTCAGTGGGGCTCTCTGAGTCCTGGCCCAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR CCA 90 bp CTCAGGGGGCCAGGGCTTAAGGGGTTGGGAAGATGCGAGAGTCTTAAATTTGGTCTCCAGACGTCTGACTaGCGAGAGAAGATGTTGTCC +
Preference number: 4 (lower is better)
Translates to: LRGPGLKGLGRCESLKFGLQTSD*REKMLS
Trigger: GGACAACATCTTCTCTCGCCAGTCAGACGTCTGGAG...ACCAAATTTAAGACTCTCGCATCTTCCCAACCCCTTAAGCCCTGGCCCCCTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR CCA 90 bp AGGGAAAGGAACTTGCCCACTGTCACACTGCATGGAAGGGGCAAAACTGTAGGCCAGATACCATTAGGGTaGACTGGGACCCCAGCCTTT +
Preference number: 4 (lower is better)
Translates to: RERNLPTVTLHGRGKTVGQIPLG*TGTPAF
Trigger: AAAGGCTGGGGTCCCAGTCCACCCTAATGGTATCTG...GCCTACAGTTTTGCCCCTTCCATGCAGTGTGACAGTGGGCAAGTTCCTTTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000458235.7
CDS-3UTR TCA 90 bp GGTTGGGAAGATGCGAGAGTCTTAAATTTGGTTCCTTGCTTCTTTGGGCCAGGAATAGGAGCCAGGACGTaGGCCCCCAGTCTTGAGCTT +
Preference number: 4 (lower is better)
Translates to: GWEDARVLNLVPCFFGPGIGART*APSLEL
Trigger: AAGCTCAAGACTGGGGGCTCACGTCCTGGCTCCTAT...TCCTGGCCCAAAGAAGCAAGGAACCAAATTTAAGACTCTCGCATCTTCCCAACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR TCA 90 bp CTCAGGGGGCCAGGGCTTAAGGGGTTGGGAAGATGCGAGAGTCTTAAATTTGGTTCTGGACACAGACAGTaGGGAGGAAGCTGTCAAAGT +
Preference number: 4 (lower is better)
Translates to: LRGPGLKGLGRCESLKFGSGHRQ*GGSCQS
Trigger: ACTTTGACAGCTTCCTCCTCACTGTCTGTGTCCAGA...ACCAAATTTAAGACTCTCGCATCTTCCCAACCCCTTAAGCCCTGGCCCCCTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR TCA 90 bp CCAGTCAGAAAGTTGACCCTGCACAGCCAAGGGGTAAGCTCTGACCATTTTGCACGCTGCTTCCAGGAATaGCTCCATGCAGTTCTTGTG +
Preference number: 4 (lower is better)
Translates to: PVRKLTLHSQGVSSDHFARCFQE*LHAVLV
Trigger: CACAAGAACTGCATGGAGTCATTCCTGGAAGCAGCG...TGCAAAATGGTCAGAGCTTACCCCTTGGCTGTGCAGGGTCAACTTTCTGACTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458235.7
CDS-3UTR TCA 90 bp CTTTGGGCCAGGACTCAGAGAGCCCCACTGACACATATGCCCATCTGTCTTGAAGCTGTGAGATGTACTTaGGGTGTCTCTCCTCGAAGA +
Preference number: 4 (lower is better)
Translates to: LWARTQRAPLTHMPICLEAVRCT*GVSPRR
Trigger: TCTTCGAGGAGAGACACCTCAAGTACATCTCACAGC...TTCAAGACAGATGGGCATATGTGTCAGTGGGGCTCTCTGAGTCCTGGCCCAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR TCA 90 bp CCAGGGCTTAAGGGGTTGGGAAGATGCGAGAGTCTTAAATTTGGTTCCTTGCTTCGAAGTCAGCGATCTTaGCGTGTGCCTCGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: PGLKGLGRCESLKFGSLLRSQRS*RVPRSP
Trigger: TGGAGAGCGAGGCACACGTCAAGATCGCTGACTTCG...AAGCAAGGAACCAAATTTAAGACTCTCGCATCTTCCCAACCCCTTAAGCCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR TCA 90 bp CTTTGGGCCAGGACTCAGAGAGCCCCACTGACACATATGCCCATCTGTCTTGAATTTTGTCGCAGTAGGTaGAGAGCTCGTACAGGACGA +
Preference number: 4 (lower is better)
Translates to: LWARTQRAPLTHMPICLEFCRSR*RARTGR
Trigger: TCGTCCTGTACGAGCTCTTCACCTACTGCGACAAAA...TTCAAGACAGATGGGCATATGTGTCAGTGGGGCTCTCTGAGTCCTGGCCCAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR TCA 90 bp GGTTGGGAAGATGCGAGAGTCTTAAATTTGGTTCCTTGCTTCTTTGGGCCAGGACCCAGCACAGCTTCATaGGCTCGTGAACCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: GWEDARVLNLVPCFFGPGPSTAS*AREPQQ
Trigger: CTGCTGAGGTTCACGAGCTCATGAAGCTGTGCTGGG...TCCTGGCCCAAAGAAGCAAGGAACCAAATTTAAGACTCTCGCATCTTCCCAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR TCA 90 bp CATGGAAGGGGCAAAACTGTAGGCTCCAATACTTGGGCTCTTAACCTCCTTACTGTGCCCCTTGTAGGGTaGGGACAGAAAGGGTCCCAT +
Preference number: 4 (lower is better)
Translates to: HGRGKTVGSNTWALNLLTVPLVG*GQKGSH
Trigger: ATGGGACCCTTTCTGTCCTCACCCTACAAGGGGCAC...AGTAAGGAGGTTAAGAGCCCAAGTATTGGAGCCTACAGTTTTGCCCCTTCCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000458235.7
CDS-3UTR GCA 90 bp CATGGAAGGGGCAAAACTGTAGGCTCCAATACTTGGGCTCTTAACCTCCTTACTCCAACGCGCGGGGCCTaGTTGATGCTAATGTCTACG +
Preference number: 4 (lower is better)
Translates to: HGRGKTVGSNTWALNLLTPTRGA*LMLMST
Trigger: CGTAGACATTAGCATCAAGCAGGCCCCGCGCGTTGG...AGTAAGGAGGTTAAGAGCCCAAGTATTGGAGCCTACAGTTTTGCCCCTTCCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000458235.7
CDS-3UTR GCA 90 bp CATGGAAGGGGCAAAACTGTAGGCTCCAATACTTGGGCTCTTAACCTCCTTACTGCGGTGCCACCTCCTTaGAGAAGAAGTGCTGGGAGT +
Preference number: 4 (lower is better)
Translates to: HGRGKTVGSNTWALNLLTAVPPP*RRSAGS
Trigger: ACTCCCAGCACTTCTTCTGCAAGGAGGTGGCACCGC...AGTAAGGAGGTTAAGAGCCCAAGTATTGGAGCCTACAGTTTTGCCCCTTCCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458235.7
CDS-3UTR GCA 90 bp CTCATAGGCACAGGTGTTCAGGAGTCTAATCTTCCCTCACCCTATAAGGCATTACAGCAGCCTCGGCGGTaGCACCTCCTTGCAGAAGAA +
Preference number: 4 (lower is better)
Translates to: LIGTGVQESNLPSPYKALQQPRR*HLLAEE
Trigger: TTCTTCTGCAAGGAGGTGGCACCGCCGAGGCTGCTG...TAATGCCTTATAGGGTGAGGGAAGATTAGACTCCTGAACACCTGTGCCTATGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS-3UTR GCA 90 bp TGGGGGCCAGGATCCTCATCGGCCTCACACTCTAGCCTTTCTTCTCAGTACAGACCAGGAATGACTCCATaGAGTTCTTGTGCTTGGCAT +
Preference number: 4 (lower is better)
Translates to: WGPGSSSASHSSLSSQYRPGMTP*SSCAWH
Trigger: ATGCCAAGCACAAGAACTGCATGGAGTCATTCCTGG...TCTGTACTGAGAAGAAAGGCTAGAGTGTGAGGCCGATGAGGATCCTGGCCCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS-3UTR GCA 90 bp CCAGGGCTTAAGGGGTTGGGAAGATGCGAGAGTCTTAAATTTGGTTCCTTGCTTTGGAGCAGCACGAGATaGCGGTACGACACTTGGCTC +
Preference number: 4 (lower is better)
Translates to: PGLKGLGRCESLKFGSLLWSSTR*RYDTWL
Trigger: GAGCCAAGTGTCGTACCGGCATCTCGTGCTGCTCCA...AAGCAAGGAACCAAATTTAAGACTCTCGCATCTTCCCAACCCCTTAAGCCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR GCA 90 bp ATAGGCACAGGTGTTCAGGAGTCTAATCTTCCCTCACCCTATAAGGCATTACTATCTGGCCCGCTGTGCTaGAGCTGTTTCACGGCCACC +
Preference number: 4 (lower is better)
Translates to: IGTGVQESNLPSPYKALLSGPLC*SCFTAT
Trigger: GGTGGCCGTGAAACAGCTGCAGCACAGCGGGCCAGA...TAGTAATGCCTTATAGGGTGAGGGAAGATTAGACTCCTGAACACCTGTGCCTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS-3UTR GCA 90 bp CTCAGGGGGCCAGGGCTTAAGGGGTTGGGAAGATGCGAGAGTCTTAAATTTGGTGGTACTCCATGCCCTTaGAGATCTGCGAGGAATAGA +
Preference number: 4 (lower is better)
Translates to: LRGPGLKGLGRCESLKFGGTPCP*RSARNR
Trigger: TCTATTCCTCGCAGATCTGCAAGGGCATGGAGTACC...ACCAAATTTAAGACTCTCGCATCTTCCCAACCCCTTAAGCCCTGGCCCCCTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR GCA 90 bp AATACTTGGGCTCTTAACCTCCTTACTCTGAGCCTTCTCACGCTTGGCATGCTGGCAGTGAGCCTAGATTaGGCCACTGTACTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: NTWALNLLTLSLLTLGMLAVSLD*ATVLQP
Trigger: AGGCTGGAGTACAGTGGCGCAATCTAGGCTCACTGC...CAGCATGCCAAGCGTGAGAAGGCTCAGAGTAAGGAGGTTAAGAGCCCAAGTATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458235.7
CDS-3UTR GCA 90 bp AGGGAAAGGAACTTGCCCACTGTCACACTGCATGGAAGGGGCAAAACTGTAGGCAGAGGGAAAGGAACTTaGCCACTGTCACACTGCATG +
Preference number: 4 (lower is better)
Translates to: RERNLPTVTLHGRGKTVGRGKGT*PLSHCM
Trigger: CATGCAGTGTGACAGTGGGCAAGTTCCTTTCCCTCT...GCCTACAGTTTTGCCCCTTCCATGCAGTGTGACAGTGGGCAAGTTCCTTTCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458235.7
CDS-3UTR CCA 90 bp TGGGGGCCAGGATCCTCATCGGCCTCACACTCTAGCCTTTCTTCTCAGTACAGACCAGCCCAAACCAATTaGGGAAGTAAAAGCGAATCC +
Preference number: 4 (lower is better)
Translates to: WGPGSSSASHSSLSSQYRPAQTN*GSKSES
Trigger: GGATTCGCTTTTACTTCCCCAATTGGTTTGGGCTGG...TCTGTACTGAGAAGAAAGGCTAGAGTGTGAGGCCGATGAGGATCCTGGCCCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS-3UTR CCA 90 bp TATGAGGGAAGGCTGCAAGGATGTGGTAGCTGGAGTTTTGAGAGATGGATAAGAACGAAGCTCAGGCCCTaGATCAGGTCGCGCAGGCTT +
Preference number: 4 (lower is better)
Translates to: YEGRLQGCGSWSFERWIRTKLRP*IRSRRL
Trigger: AAGCCTGCGCGACCTGATCCAGGGCCTGAGCTTCGT...TCTTATCCATCTCTCAAAACTCCAGCTACCACATCCTTGCAGCCTTCCCTCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458235.7
CDS-3UTR CCA 90 bp TCTAATCTTCCCTCACCCTATAAGGCATTACTATTCTCATTTTGGAAAAGGGTAAGCCCCAGCCCGTCGTaGCCACCAAGGGCCCCAGGG +
Preference number: 4 (lower is better)
Translates to: SNLPSPYKALLFSFWKRVSPSPS*PPRAPG
Trigger: CCCTGGGGCCCTTGGTGGCCACGACGGGCTGGGGCT...TACCCTTTTCCAAAATGAGAATAGTAATGCCTTATAGGGTGAGGGAAGATTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS-3UTR CCA 90 bp CCAGGGCTTAAGGGGTTGGGAAGATGCGAGAGTCTTAAATTTGGTTCCTTGCTTAAGTCGCAGAAGGGCTaGAGGACCTCCTGTTCTCCC +
Preference number: 4 (lower is better)
Translates to: PGLKGLGRCESLKFGSLLKSQKG*RTSCSP
Trigger: GGGAGAACAGGAGGTCCTCCAGCCCTTCTGCGACTT...AAGCAAGGAACCAAATTTAAGACTCTCGCATCTTCCCAACCCCTTAAGCCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR CCA 90 bp CCAGGGCTTAAGGGGTTGGGAAGATGCGAGAGTCTTAAATTTGGTTCCTTGCTTGGACCAAGGGGGTTCTaGACACAGACAGTGAGGAGG +
Preference number: 4 (lower is better)
Translates to: PGLKGLGRCESLKFGSLLGPRGF*TQTVRR
Trigger: CCTCCTCACTGTCTGTGTCCAGAACCCCCTTGGTCC...AAGCAAGGAACCAAATTTAAGACTCTCGCATCTTCCCAACCCCTTAAGCCCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR CCA 90 bp GGTTGGGAAGATGCGAGAGTCTTAAATTTGGTTCCTTGCTTCTTTGGGCCAGGAGGACCAAGGGGGTTCTaGACACAGACAGTGAGGAGG +
Preference number: 4 (lower is better)
Translates to: GWEDARVLNLVPCFFGPGGPRGF*TQTVRR
Trigger: CCTCCTCACTGTCTGTGTCCAGAACCCCCTTGGTCC...TCCTGGCCCAAAGAAGCAAGGAACCAAATTTAAGACTCTCGCATCTTCCCAACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR CCA 90 bp CCAGGGCTTAAGGGGTTGGGAAGATGCGAGAGTCTTAAATTTGGTTCCTTGCTTCTGGCTGGCACCAGGTaGCCACGTTTTCGCAGATAC +
Preference number: 4 (lower is better)
Translates to: PGLKGLGRCESLKFGSLLLAGTR*PRFRRY
Trigger: GTATCTGCGAAAACGTGGCCACCTGGTGCCAGCCAG...AAGCAAGGAACCAAATTTAAGACTCTCGCATCTTCCCAACCCCTTAAGCCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR CCA 90 bp CCAGGGCTTAAGGGGTTGGGAAGATGCGAGAGTCTTAAATTTGGTTCCTTGCTTGTCAGGGGAGACAGCTaGACACAGACACTTCCCCAG +
Preference number: 4 (lower is better)
Translates to: PGLKGLGRCESLKFGSLLVRGDS*TQTLPQ
Trigger: CTGGGGAAGTGTCTGTGTCCAGCTGTCTCCCCTGAC...AAGCAAGGAACCAAATTTAAGACTCTCGCATCTTCCCAACCCCTTAAGCCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000458235.7
CDS-3UTR TCA 90 bp TATGAGGGAAGGCTGCAAGGATGTGGTAGCTGGAGTTTTGAGAGATGGATAAGAGGCAGGCCTTGTAGCTaGCAGTCTTCAGCAGCTCTC +
Preference number: 4 (lower is better)
Translates to: YEGRLQGCGSWSFERWIRGRPCS*QSSAAL
Trigger: GAGAGCTGCTGAAGACTGTCAGCTACAAGGCCTGCC...TCTTATCCATCTCTCAAAACTCCAGCTACCACATCCTTGCAGCCTTCCCTCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458235.7
CDS-3UTR TCA 90 bp AATACTTGGGCTCTTAACCTCCTTACTCTGAGCCTTCTCACGCTTGGCATGCTGCACTGTGCAGTGCTTTaGGGATCTGAATCTCCCGCT +
Preference number: 4 (lower is better)
Translates to: NTWALNLLTLSLLTLGMLHCAVL*GSESPA
Trigger: AGCGGGAGATTCAGATCCTCAAAGCACTGCACAGTG...CAGCATGCCAAGCGTGAGAAGGCTCAGAGTAAGGAGGTTAAGAGCCCAAGTATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458235.7
CDS-3UTR TCA 90 bp TATGAGGGAAGGCTGCAAGGATGTGGTAGCTGGAGTTTTGAGAGATGGATAAGACCTCTGGGTGAGCAGTaGAGGCATGAGTCTCACACC +
Preference number: 4 (lower is better)
Translates to: YEGRLQGCGSWSFERWIRPLGEQ*RHESHT
Trigger: GGTGTGAGACTCATGCCTTCACTGCTCACCCAGAGG...TCTTATCCATCTCTCAAAACTCCAGCTACCACATCCTTGCAGCCTTCCCTCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458235.7
CDS-3UTR TCA 90 bp GGTTGGGAAGATGCGAGAGTCTTAAATTTGGTTCCTTGCTTCTTTGGGCCAGGACTCAGAGAGCCCCACTaGCACATATGCCCATCTGTC +
Preference number: 4 (lower is better)
Translates to: GWEDARVLNLVPCFFGPGLREPH*HICPSV
Trigger: GACAGATGGGCATATGTGTCAGTGGGGCTCTCTGAG...TCCTGGCCCAAAGAAGCAAGGAACCAAATTTAAGACTCTCGCATCTTCCCAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR TCA 90 bp AATACTTGGGCTCTTAACCTCCTTACTCTGAGCCTTCTCACGCTTGGCATGCTGAGTAGTGGGGGTATATaGGGGAAGGCTGCAAGGATG +
Preference number: 4 (lower is better)
Translates to: NTWALNLLTLSLLTLGMLSSGGI*GKAARM
Trigger: CATCCTTGCAGCCTTCCCTCATATACCCCCACTACT...CAGCATGCCAAGCGTGAGAAGGCTCAGAGTAAGGAGGTTAAGAGCCCAAGTATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458235.7
CDS-3UTR GCA 90 bp CCAGTCAGAAAGTTGACCCTGCACAGCCAAGGGGTAAGCTCTGACCATTTTGCACTCTTCACTTGGAGGTaGCATGAGTGCAACTTGCCT +
Preference number: 4 (lower is better)
Translates to: PVRKLTLHSQGVSSDHFALFTWR*HECNLP
Trigger: AGGCAAGTTGCACTCATGGCACCTCCAAGTGAAGAG...TGCAAAATGGTCAGAGCTTACCCCTTGGCTGTGCAGGGTCAACTTTCTGACTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458235.7
CDS-3UTR GCA 90 bp CTCATAGGCACAGGTGTTCAGGAGTCTAATCTTCCCTCACCCTATAAGGCATTAACAGCAGGACTTGGGTaGTGGCATCCTCCACGGAGA +
Preference number: 4 (lower is better)
Translates to: LIGTGVQESNLPSPYKALTAGLG*WHPPRR
Trigger: TCTCCGTGGAGGATGCCAGCACCCAAGTCCTGCTGT...TAATGCCTTATAGGGTGAGGGAAGATTAGACTCCTGAACACCTGTGCCTATGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS-3UTR GCA 90 bp TCTAATCTTCCCTCACCCTATAAGGCATTACTATTCTCATTTTGGAAAAGGGTACCTGGGTCCAGGCGATaGCGCCGTCACCAGCCACGC +
Preference number: 4 (lower is better)
Translates to: SNLPSPYKALLFSFWKRVPGSRR*RRHQPR
Trigger: GCGTGGCTGGTGACGGCGGCATCGCCTGGACCCAGG...TACCCTTTTCCAAAATGAGAATAGTAATGCCTTATAGGGTGAGGGAAGATTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS-3UTR GCA 90 bp CTCATAGGCACAGGTGTTCAGGAGTCTAATCTTCCCTCACCCTATAAGGCATTATCCGGGCAGAGACATTaGCATGGGGCAGGCCTTTGT +
Preference number: 4 (lower is better)
Translates to: LIGTGVQESNLPSPYKALSGQRH*HGAGLC
Trigger: ACAAAGGCCTGCCCCATGGCAATGTCTCTGCCCGGA...TAATGCCTTATAGGGTGAGGGAAGATTAGACTCCTGAACACCTGTGCCTATGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS-3UTR GCA 90 bp CTCATAGGCACAGGTGTTCAGGAGTCTAATCTTCCCTCACCCTATAAGGCATTATCCAAGCTAAGTGTCTaGGCCTCCCGGAGACACTCG +
Preference number: 4 (lower is better)
Translates to: LIGTGVQESNLPSPYKALSKLSV*ASRRHS
Trigger: CGAGTGTCTCCGGGAGGCGCAGACACTTAGCTTGGA...TAATGCCTTATAGGGTGAGGGAAGATTAGACTCCTGAACACCTGTGCCTATGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS-3UTR GCA 90 bp CCAGGGCTTAAGGGGTTGGGAAGATGCGAGAGTCTTAAATTTGGTTCCTTGCTTCCGGCTCATAGGCCATaGACTGTTGAATCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: PGLKGLGRCESLKFGSLLPAHRP*TVESAG
Trigger: CCCTGCTGATTCAACAGTGCATGGCCTATGAGCCGG...AAGCAAGGAACCAAATTTAAGACTCTCGCATCTTCCCAACCCCTTAAGCCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR GCA 90 bp CTCATAGGCACAGGTGTTCAGGAGTCTAATCTTCCCTCACCCTATAAGGCATTACCACGCTGCCAAAGTTaGCCTTGCCCAGCTGTGAGA +
Preference number: 4 (lower is better)
Translates to: LIGTGVQESNLPSPYKALPRCQS*PCPAVR
Trigger: TCTCACAGCTGGGCAAGGGCAACTTTGGCAGCGTGG...TAATGCCTTATAGGGTGAGGGAAGATTAGACTCCTGAACACCTGTGCCTATGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS-3UTR GCA 90 bp TTGCGTGAAAAGTTCCTGCCAGGTTTGGTGTCATCCCTTTGTGCCCCTTGTAGGGGTACTCCATGCCCTTaGAGATCTGCGAGGAATAGA +
Preference number: 4 (lower is better)
Translates to: LREKFLPGLVSSLCAPCRGTPCP*RSARNR
Trigger: TCTATTCCTCGCAGATCTGCAAGGGCATGGAGTACC...CCTACAAGGGGCACAAAGGGATGACACCAAACCTGGCAGGAACTTTTCACGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000458235.7
CDS-3UTR GCA 90 bp AATACTTGGGCTCTTAACCTCCTTACTCTGAGCCTTCTCACGCTTGGCATGCTGTGCCCACTGTCACACTaGATGGAAGGGGCAAAACTG +
Preference number: 4 (lower is better)
Translates to: NTWALNLLTLSLLTLGMLCPLSH*MEGAKL
Trigger: CAGTTTTGCCCCTTCCATGCAGTGTGACAGTGGGCA...CAGCATGCCAAGCGTGAGAAGGCTCAGAGTAAGGAGGTTAAGAGCCCAAGTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458235.7
CDS-3UTR GCA 90 bp CAGGAGTCTAATCTTCCCTCACCCTATAAGGCATTACTATTCTCATTTTGGAAAAGGCGCCAGCTGGCTTaGCCGAGACCCCGGCCCAAT +
Preference number: 4 (lower is better)
Translates to: QESNLPSPYKALLFSFWKRRQLA*PRPRPN
Trigger: ATTGGGCCGGGGTCTCGGGCAAGCCAGCTGGCGCCT...TTTCCAAAATGAGAATAGTAATGCCTTATAGGGTGAGGGAAGATTAGACTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS-3UTR CCA 90 bp TCAGGGGGCCAGGGCTTAAGGGGTTGGGAAGATGCGAGAGTCTTAAATTTGGTTAGGTCCTCAGCCAAGTaGTCCCCAAAGGAGAAAGAT +
Preference number: 4 (lower is better)
Translates to: SGGQGLRGWEDARVLNLVRSSAK*SPKEKD
Trigger: ATCTTTCTCCTTTGGGGACCACTTGGCTGAGGACCT...AACCAAATTTAAGACTCTCGCATCTTCCCAACCCCTTAAGCCCTGGCCCCCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR CCA 90 bp GGTTGGGAAGATGCGAGAGTCTTAAATTTGGTTCCTTGCTTCTTTGGGCCAGGAAGAGCAAAGAGGGAGTaGTACACAGGCAGGATGCCG +
Preference number: 4 (lower is better)
Translates to: GWEDARVLNLVPCFFGPGRAKRE*YTGRMP
Trigger: CGGCATCCTGCCTGTGTACCACTCCCTCTTTGCTCT...TCCTGGCCCAAAGAAGCAAGGAACCAAATTTAAGACTCTCGCATCTTCCCAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR CCA 90 bp CTTTGGGCCAGGACTCAGAGAGCCCCACTGACACATATGCCCATCTGTCTTGAACCAGCCCAAACCAATTaGGGAAGTAAAAGCGAATCC +
Preference number: 4 (lower is better)
Translates to: LWARTQRAPLTHMPICLEPAQTN*GSKSES
Trigger: GGATTCGCTTTTACTTCCCCAATTGGTTTGGGCTGG...TTCAAGACAGATGGGCATATGTGTCAGTGGGGCTCTCTGAGTCCTGGCCCAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR CCA 90 bp AATCTTCCCTCACCCTATAAGGCATTACTATTCTCATTTTGGAAAAGGGTAAACAGCTCTCCCGGCCGCTaGGCCTGCTCTCGCGCCATC +
Preference number: 4 (lower is better)
Translates to: NLPSPYKALLFSFWKRVNSSPGR*ACSRAI
Trigger: GATGGCGCGAGAGCAGGCCCAGCGGCCGGGAGAGCT...GTTTACCCTTTTCCAAAATGAGAATAGTAATGCCTTATAGGGTGAGGGAAGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS-3UTR CCA 90 bp TGGGGGCCAGGATCCTCATCGGCCTCACACTCTAGCCTTTCTTCTCAGTACAGATCGGCCTCTAAAATCTaGTTGTCTGTCCTGGTAACA +
Preference number: 4 (lower is better)
Translates to: WGPGSSSASHSSLSSQYRSASKI*LSVLVT
Trigger: TGTTACCAGGACAGACAACCAGATTTTAGAGGCCGA...TCTGTACTGAGAAGAAAGGCTAGAGTGTGAGGCCGATGAGGATCCTGGCCCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS-3UTR CCA 90 bp CTCATAGGCACAGGTGTTCAGGAGTCTAATCTTCCCTCACCCTATAAGGCATTAGGACCAAGGGGGTTCTaGACACAGACAGTGAGGAGG +
Preference number: 4 (lower is better)
Translates to: LIGTGVQESNLPSPYKALGPRGF*TQTVRR
Trigger: CCTCCTCACTGTCTGTGTCCAGAACCCCCTTGGTCC...TAATGCCTTATAGGGTGAGGGAAGATTAGACTCCTGAACACCTGTGCCTATGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS-3UTR CCA 90 bp AATACTTGGGCTCTTAACCTCCTTACTCTGAGCCTTCTCACGCTTGGCATGCTGTCTCCTCGAAGATCGTaGGGTCTTGGCAGGCATAGA +
Preference number: 4 (lower is better)
Translates to: NTWALNLLTLSLLTLGMLSPRRS*GLGRHR
Trigger: TCTATGCCTGCCAAGACCCCACGATCTTCGAGGAGA...CAGCATGCCAAGCGTGAGAAGGCTCAGAGTAAGGAGGTTAAGAGCCCAAGTATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458235.7
CDS-3UTR CCA 90 bp ATAGGCACAGGTGTTCAGGAGTCTAATCTTCCCTCACCCTATAAGGCATTACTAAATGGGGCTCTGGCCTaGCTCGCGGACCACGTAGTA +
Preference number: 4 (lower is better)
Translates to: IGTGVQESNLPSPYKALLNGALA*LADHVV
Trigger: TACTACGTGGTCCGCGAGCCAGGCCAGAGCCCCATT...TAGTAATGCCTTATAGGGTGAGGGAAGATTAGACTCCTGAACACCTGTGCCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS-3UTR CCA 90 bp TCAGGGGGCCAGGGCTTAAGGGGTTGGGAAGATGCGAGAGTCTTAAATTTGGTTCAGGGCTTAAGGGGTTaGGAAGATGCGAGAGTCTTA +
Preference number: 4 (lower is better)
Translates to: SGGQGLRGWEDARVLNLVQGLRG*EDARVL
Trigger: TAAGACTCTCGCATCTTCCCAACCCCTTAAGCCCTG...AACCAAATTTAAGACTCTCGCATCTTCCCAACCCCTTAAGCCCTGGCCCCCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR TCA 90 bp ATAGGCACAGGTGTTCAGGAGTCTAATCTTCCCTCACCCTATAAGGCATTACTAATAGGAGCCAGGACGTaGGCCCCCAGTCTTGAGCTT +
Preference number: 4 (lower is better)
Translates to: IGTGVQESNLPSPYKALLIGART*APSLEL
Trigger: AAGCTCAAGACTGGGGGCTCACGTCCTGGCTCCTAT...TAGTAATGCCTTATAGGGTGAGGGAAGATTAGACTCCTGAACACCTGTGCCTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS-3UTR TCA 90 bp ATAGGCACAGGTGTTCAGGAGTCTAATCTTCCCTCACCCTATAAGGCATTACTACCCGGTAAATCTTGGTaGAGGACCCATGGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: IGTGVQESNLPSPYKALLPGKSW*RTHGPG
Trigger: ACCTGGGCCATGGGTCCTTCACCAAGATTTACCGGG...TAGTAATGCCTTATAGGGTGAGGGAAGATTAGACTCCTGAACACCTGTGCCTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS-3UTR TCA 90 bp TCAGGGGGCCAGGGCTTAAGGGGTTGGGAAGATGCGAGAGTCTTAAATTTGGTTGAGGAGCTCATAGTCTaGAGAGATGAGGCTATTGAG +
Preference number: 4 (lower is better)
Translates to: SGGQGLRGWEDARVLNLVEELIV*RDEAIE
Trigger: CTCAATAGCCTCATCTCTTCAGACTATGAGCTCCTC...AACCAAATTTAAGACTCTCGCATCTTCCCAACCCCTTAAGCCCTGGCCCCCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR GCA 90 bp TCTAATCTTCCCTCACCCTATAAGGCATTACTATTCTCATTTTGGAAAAGGGTACGCGGCGCAGGGCTCTaGGCACCGTCCTCCGAATAC +
Preference number: 4 (lower is better)
Translates to: SNLPSPYKALLFSFWKRVRGAGL*APSSEY
Trigger: GTATTCGGAGGACGGTGCGCAGAGCCCTGCGCCGCG...TACCCTTTTCCAAAATGAGAATAGTAATGCCTTATAGGGTGAGGGAAGATTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS-3UTR GCA 90 bp TCTAATCTTCCCTCACCCTATAAGGCATTACTATTCTCATTTTGGAAAAGGGTAACAGTGACCAGGCGGTaGTCTCCGGCCGGGCCAACG +
Preference number: 4 (lower is better)
Translates to: SNLPSPYKALLFSFWKRVTVTRR*SPAGPT
Trigger: CGTTGGCCCGGCCGGAGAGCACCGCCTGGTCACTGT...TACCCTTTTCCAAAATGAGAATAGTAATGCCTTATAGGGTGAGGGAAGATTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS-3UTR GCA 90 bp CAGGAGTCTAATCTTCCCTCACCCTATAAGGCATTACTATTCTCATTTTGGAAAATGGGGCCGTGGCACTaGTCGGCCACTTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: QESNLPSPYKALLFSFWKMGPWH*SATSSS
Trigger: GCTGGAGGAAGTGGCCGAGCAGTGCCACGGCCCCAT...TTTCCAAAATGAGAATAGTAATGCCTTATAGGGTGAGGGAAGATTAGACTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS-3UTR GCA 90 bp CCAGTCAGAAAGTTGACCCTGCACAGCCAAGGGGTAAGCTCTGACCATTTTGCACCAGGAATGACTCCATaGAGTTCTTGTGCTTGGCAT +
Preference number: 4 (lower is better)
Translates to: PVRKLTLHSQGVSSDHFAPGMTP*SSCAWH
Trigger: ATGCCAAGCACAAGAACTGCATGGAGTCATTCCTGG...TGCAAAATGGTCAGAGCTTACCCCTTGGCTGTGCAGGGTCAACTTTCTGACTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458235.7
CDS-3UTR GCA 90 bp TCAGGGGGCCAGGGCTTAAGGGGTTGGGAAGATGCGAGAGTCTTAAATTTGGTTAGGTGTACAAATTCCTaGACCATGGTGCTGTCTCCA +
Preference number: 4 (lower is better)
Translates to: SGGQGLRGWEDARVLNLVRCTNS*TMVLSP
Trigger: TGGAGACAGCACCATGGTGCAGGAATTTGTACACCT...AACCAAATTTAAGACTCTCGCATCTTCCCAACCCCTTAAGCCCTGGCCCCCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR GCA 90 bp CTCATAGGCACAGGTGTTCAGGAGTCTAATCTTCCCTCACCCTATAAGGCATTAAGCGATCTTGACGTGTaGCTCGCTCTCCACGAGGAT +
Preference number: 4 (lower is better)
Translates to: LIGTGVQESNLPSPYKALSDLDV*LALHED
Trigger: ATCCTCGTGGAGAGCGAGGCACACGTCAAGATCGCT...TAATGCCTTATAGGGTGAGGGAAGATTAGACTCCTGAACACCTGTGCCTATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS-3UTR GCA 90 bp CCCAGAGAGGGAAAGGAACTTGCCCACTGTCACACTGCATGGAAGGGGCAAAACTTAAATTTGGTTCCTTaGTTCTTTGGGCCAGGACTC +
Preference number: 4 (lower is better)
Translates to: PREGKELAHCHTAWKGQNLNLVP*FFGPGL
Trigger: GAGTCCTGGCCCAAAGAAGCAAGGAACCAAATTTAA...GTTTTGCCCCTTCCATGCAGTGTGACAGTGGGCAAGTTCCTTTCCCTCTCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458235.7
CDS-3UTR GCA 90 bp CCCAGAGAGGGAAAGGAACTTGCCCACTGTCACACTGCATGGAAGGGGCAAAACAAGGGGTTGGGAAGATaGGAGAGTCTTAAATTTGGT +
Preference number: 4 (lower is better)
Translates to: PREGKELAHCHTAWKGQNKGLGR*ESLKFG
Trigger: ACCAAATTTAAGACTCTCGCATCTTCCCAACCCCTT...GTTTTGCCCCTTCCATGCAGTGTGACAGTGGGCAAGTTCCTTTCCCTCTCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000458235.7
CDS-3UTR CCA 90 bp CAGGAGTCTAATCTTCCCTCACCCTATAAGGCATTACTATTCTCATTTTGGAAAGGATGCCGCTGGCCTTaGCAGCCTGCACGCACAGGT +
Preference number: 4 (lower is better)
Translates to: QESNLPSPYKALLFSFWKGCRWP*QPARTG
Trigger: ACCTGTGCGTGCAGGCTGCCAAGGCCAGCGGCATCC...TTTCCAAAATGAGAATAGTAATGCCTTATAGGGTGAGGGAAGATTAGACTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS-3UTR CCA 90 bp AATCTTCCCTCACCCTATAAGGCATTACTATTCTCATTTTGGAAAAGGGTAAACCAGGCAGGATGCCGCTaGCCTTGGCAGCCTGCACGC +
Preference number: 4 (lower is better)
Translates to: NLPSPYKALLFSFWKRVNQAGCR*PWQPAR
Trigger: GCGTGCAGGCTGCCAAGGCCAGCGGCATCCTGCCTG...GTTTACCCTTTTCCAAAATGAGAATAGTAATGCCTTATAGGGTGAGGGAAGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS-3UTR CCA 90 bp CTCAGGGGGCCAGGGCTTAAGGGGTTGGGAAGATGCGAGAGTCTTAAATTTGGTTCGGCCTCTAAAATCTaGTTGTCTGTCCTGGTAACA +
Preference number: 4 (lower is better)
Translates to: LRGPGLKGLGRCESLKFGSASKI*LSVLVT
Trigger: TGTTACCAGGACAGACAACCAGATTTTAGAGGCCGA...ACCAAATTTAAGACTCTCGCATCTTCCCAACCCCTTAAGCCCTGGCCCCCTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR CCA 90 bp ATAGGCACAGGTGTTCAGGAGTCTAATCTTCCCTCACCCTATAAGGCATTACTATTGCAGAAGAAGTGCTaGGAGTCCGTGGTCAGCCGG +
Preference number: 4 (lower is better)
Translates to: IGTGVQESNLPSPYKALLLQKKC*ESVVSR
Trigger: CCGGCTGACCACGGACTCCCAGCACTTCTTCTGCAA...TAGTAATGCCTTATAGGGTGAGGGAAGATTAGACTCCTGAACACCTGTGCCTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS-3UTR CCA 90 bp GGTTGGGAAGATGCGAGAGTCTTAAATTTGGTTCCTTGCTTCTTTGGGCCAGGAGAACCAAGGATGATGTaGGTGGGCTGTGACCTCTCT +
Preference number: 4 (lower is better)
Translates to: GWEDARVLNLVPCFFGPGEPRMM*VGCDLS
Trigger: AGAGAGGTCACAGCCCACCCACATCATCCTTGGTTC...TCCTGGCCCAAAGAAGCAAGGAACCAAATTTAAGACTCTCGCATCTTCCCAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR CCA 90 bp TATGAGGGAAGGCTGCAAGGATGTGGTAGCTGGAGTTTTGAGAGATGGATAAGATGCCGGTACGACACTTaGCTCATCAAGCTCGCTGCT +
Preference number: 4 (lower is better)
Translates to: YEGRLQGCGSWSFERWIRCRYDT*LIKLAA
Trigger: AGCAGCGAGCTTGATGAGCCAAGTGTCGTACCGGCA...TCTTATCCATCTCTCAAAACTCCAGCTACCACATCCTTGCAGCCTTCCCTCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458235.7
CDS-3UTR CCA 90 bp CTTTGGGCCAGGACTCAGAGAGCCCCACTGACACATATGCCCATCTGTCTTGAAGCAGATACATGTCTATaGCCCCCAGGTGTACAAATT +
Preference number: 4 (lower is better)
Translates to: LWARTQRAPLTHMPICLEADTCL*PPGVQI
Trigger: AATTTGTACACCTGGGGGCCATAGACATGTATCTGC...TTCAAGACAGATGGGCATATGTGTCAGTGGGGCTCTCTGAGTCCTGGCCCAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR CCA 90 bp CAGGAGTCTAATCTTCCCTCACCCTATAAGGCATTACTATTCTCATTTTGGAAACCTGCAGCTTCCAGCTaGCTGGCACCAGGTGGCCAC +
Preference number: 4 (lower is better)
Translates to: QESNLPSPYKALLFSFWKPAASS*LAPGGH
Trigger: GTGGCCACCTGGTGCCAGCCAGCTGGAAGCTGCAGG...TTTCCAAAATGAGAATAGTAATGCCTTATAGGGTGAGGGAAGATTAGACTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS-3UTR CCA 90 bp GTGTTCAGGAGTCTAATCTTCCCTCACCCTATAAGGCATTACTATTCTCATTTTGTCCCTCTGCTGGTCTaGCCCGCTGTGCTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: VFRSLIFPHPIRHYYSHFVPLLV*PAVLQL
Trigger: CAGCTGCAGCACAGCGGGCCAGACCAGCAGAGGGAC...AAAATGAGAATAGTAATGCCTTATAGGGTGAGGGAAGATTAGACTCCTGAACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS-3UTR CCA 90 bp AATCTTCCCTCACCCTATAAGGCATTACTATTCTCATTTTGGAAAAGGGTAAACAGAGAAGGAGGCGGCTaGCATCGAGGCGCGCGCGGT +
Preference number: 4 (lower is better)
Translates to: NLPSPYKALLFSFWKRVNREGGG*HRGARG
Trigger: ACCGCGCGCGCCTCGATGCCAGCCGCCTCCTTCTCT...GTTTACCCTTTTCCAAAATGAGAATAGTAATGCCTTATAGGGTGAGGGAAGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS-3UTR CCA 90 bp CATGGAAGGGGCAAAACTGTAGGCTCCAATACTTGGGCTCTTAACCTCCTTACTCTCCAGACGTCTGACTaGCGAGAGAAGATGTTGTCC +
Preference number: 4 (lower is better)
Translates to: HGRGKTVGSNTWALNLLTLQTSD*REKMLS
Trigger: GGACAACATCTTCTCTCGCCAGTCAGACGTCTGGAG...AGTAAGGAGGTTAAGAGCCCAAGTATTGGAGCCTACAGTTTTGCCCCTTCCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458235.7
CDS-3UTR CCA 90 bp CCAGGGCTTAAGGGGTTGGGAAGATGCGAGAGTCTTAAATTTGGTTCCTTGCTTAGTTCCTGCCAGGTTTaGTGTCATCCCTTTGTGCCC +
Preference number: 4 (lower is better)
Translates to: PGLKGLGRCESLKFGSLLSSCQV*CHPFVP
Trigger: GGGCACAAAGGGATGACACCAAACCTGGCAGGAACT...AAGCAAGGAACCAAATTTAAGACTCTCGCATCTTCCCAACCCCTTAAGCCCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458235.7
CDS-3UTR CCA 90 bp CTCAGGGGGCCAGGGCTTAAGGGGTTGGGAAGATGCGAGAGTCTTAAATTTGGTGTAGGCTCCAATACTTaGGCTCTTAACCTCCTTACT +
Preference number: 4 (lower is better)
Translates to: LRGPGLKGLGRCESLKFGVGSNT*ALNLLT
Trigger: AGTAAGGAGGTTAAGAGCCCAAGTATTGGAGCCTAC...ACCAAATTTAAGACTCTCGCATCTTCCCAACCCCTTAAGCCCTGGCCCCCTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458235.7
CDS-3UTR CCA 90 bp GTGTTCAGGAGTCTAATCTTCCCTCACCCTATAAGGCATTACTATTCTCATTTTAGCGGGCAGGGACCCTaGACTTTCGAAGGGCGGGCA +
Preference number: 4 (lower is better)
Translates to: VFRSLIFPHPIRHYYSHFSGQGP*TFEGRA
Trigger: TGCCCGCCCTTCGAAAGTCCAGGGTCCCTGCCCGCT...AAAATGAGAATAGTAATGCCTTATAGGGTGAGGGAAGATTAGACTCCTGAACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534444.1
3UTR CAA 72 bp GGCTTAAGGGGTTGGGAAGATGCGAGAGTCTTAAATTaGGTTCCTTGCTTCTTTGGGCCAGGACTCAGAGAG +
Preference number: 4 (lower is better)
Translates to: GLRGWEDARVLN*VPCFFGPGLRE
Trigger: CTCTCTGAGTCCTGGCCCAAAGAAGCAAGGAACCAAATTTAAGACTCTCGCATCTTCCCAACCCCTTAAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR TCA 90 bp AATCTTCCCTCACCCTATAAGGCATTACTATTCTCATTTTGGAAAAGGGTAAACTGGGCAGGTACTCCATaGCCAGCCGCAGGCTCTGGC +
Preference number: 4 (lower is better)
Translates to: NLPSPYKALLFSFWKRVNWAGTP*PAAGSG
Trigger: GCCAGAGCCTGCGGCTGGTCATGGAGTACCTGCCCA...GTTTACCCTTTTCCAAAATGAGAATAGTAATGCCTTATAGGGTGAGGGAAGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS-3UTR TCA 90 bp CATGGAAGGGGCAAAACTGTAGGCTCCAATACTTGGGCTCTTAACCTCCTTACTTTTTGTCGCAGTAGGTaGAGAGCTCGTACAGGACGA +
Preference number: 4 (lower is better)
Translates to: HGRGKTVGSNTWALNLLTFCRSR*RARTGR
Trigger: TCGTCCTGTACGAGCTCTTCACCTACTGCGACAAAA...AGTAAGGAGGTTAAGAGCCCAAGTATTGGAGCCTACAGTTTTGCCCCTTCCATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000458235.7
CDS-3UTR GCA 90 bp AATCTTCCCTCACCCTATAAGGCATTACTATTCTCATTTTGGAAAAGGGTAAACCTGGCCTTGGCAGCCTaGACGCACAGGTCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: NLPSPYKALLFSFWKRVNLALAA*THRSSA
Trigger: GGCTGAGGACCTGTGCGTGCAGGCTGCCAAGGCCAG...GTTTACCCTTTTCCAAAATGAGAATAGTAATGCCTTATAGGGTGAGGGAAGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS-3UTR GCA 90 bp ATAGGCACAGGTGTTCAGGAGTCTAATCTTCCCTCACCCTATAAGGCATTACTACCGGCTCATAGGCCATaGACTGTTGAATCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: IGTGVQESNLPSPYKALLPAHRP*TVESAG
Trigger: CCCTGCTGATTCAACAGTGCATGGCCTATGAGCCGG...TAGTAATGCCTTATAGGGTGAGGGAAGATTAGACTCCTGAACACCTGTGCCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS-3UTR GCA 90 bp TCTAATCTTCCCTCACCCTATAAGGCATTACTATTCTCATTTTGGAAAAGGGTACAGCCCATCACGAGGTaGCAGGGCACCAGGTGTGGG +
Preference number: 4 (lower is better)
Translates to: SNLPSPYKALLFSFWKRVQPITR*QGTRCG
Trigger: CCCACACCTGGTGCCCTGGCACCTCGTGATGGGCTG...TACCCTTTTCCAAAATGAGAATAGTAATGCCTTATAGGGTGAGGGAAGATTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS-3UTR CCA 90 bp ATAGGCACAGGTGTTCAGGAGTCTAATCTTCCCTCACCCTATAAGGCATTACTAGGGCGTCTCTTCACTTaGAGGTGCCATGAGTGCAAC +
Preference number: 4 (lower is better)
Translates to: IGTGVQESNLPSPYKALLGRLFT*RCHECN
Trigger: GTTGCACTCATGGCACCTCCAAGTGAAGAGACGCCC...TAGTAATGCCTTATAGGGTGAGGGAAGATTAGACTCCTGAACACCTGTGCCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS-3UTR CCA 90 bp ATAGGCACAGGTGTTCAGGAGTCTAATCTTCCCTCACCCTATAAGGCATTACTAGAGGTGCTCCAGGACTaGCAGGTCAAGGATAGCACT +
Preference number: 4 (lower is better)
Translates to: IGTGVQESNLPSPYKALLEVLQD*QVKDST
Trigger: AGTGCTATCCTTGACCTGCCAGTCCTGGAGCACCTC...TAGTAATGCCTTATAGGGTGAGGGAAGATTAGACTCCTGAACACCTGTGCCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS-3UTR CCA 90 bp TCAGGGGGCCAGGGCTTAAGGGGTTGGGAAGATGCGAGAGTCTTAAATTTGGTTAATGTCTACGATTTCTaGAAAGTCGCAGAAGGGCTG +
Preference number: 4 (lower is better)
Translates to: SGGQGLRGWEDARVLNLVNVYDF*KVAEGL
Trigger: CAGCCCTTCTGCGACTTTCCAGAAATCGTAGACATT...AACCAAATTTAAGACTCTCGCATCTTCCCAACCCCTTAAGCCCTGGCCCCCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR CCA 90 bp CAGGAGTCTAATCTTCCCTCACCCTATAAGGCATTACTATTCTCATTTTGGAAAAGAGTGATGGGGCCGTaGCACTGCTCGGCCACTTCC +
Preference number: 4 (lower is better)
Translates to: QESNLPSPYKALLFSFWKRVMGP*HCSATS
Trigger: GGAAGTGGCCGAGCAGTGCCACGGCCCCATCACTCT...TTTCCAAAATGAGAATAGTAATGCCTTATAGGGTGAGGGAAGATTAGACTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS-3UTR CCA 90 bp GGTTGGGAAGATGCGAGAGTCTTAAATTTGGTTCCTTGCTTCTTTGGGCCAGGAGGTTGGACTTTTCTTTaGGTCTGGGGATACAGCAGG +
Preference number: 4 (lower is better)
Translates to: GWEDARVLNLVPCFFGPGGWTFL*VWGYSR
Trigger: CCTGCTGTATCCCCAGACCCAAAGAAAAGTCCAACC...TCCTGGCCCAAAGAAGCAAGGAACCAAATTTAAGACTCTCGCATCTTCCCAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR CCA 90 bp GGTTGGGAAGATGCGAGAGTCTTAAATTTGGTTCCTTGCTTCTTTGGGCCAGGAGGACCACGATCAGGTTaGACTTTTCTTTGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: GWEDARVLNLVPCFFGPGGPRSG*TFLWVW
Trigger: CCAGACCCAAAGAAAAGTCCAACCTGATCGTGGTCC...TCCTGGCCCAAAGAAGCAAGGAACCAAATTTAAGACTCTCGCATCTTCCCAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR CCA 90 bp CCAGGGCTTAAGGGGTTGGGAAGATGCGAGAGTCTTAAATTTGGTTCCTTGCTTCAGGGCTTAAGGGGTTaGGAAGATGCGAGAGTCTTA +
Preference number: 4 (lower is better)
Translates to: PGLKGLGRCESLKFGSLLQGLRG*EDARVL
Trigger: TAAGACTCTCGCATCTTCCCAACCCCTTAAGCCCTG...AAGCAAGGAACCAAATTTAAGACTCTCGCATCTTCCCAACCCCTTAAGCCCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR CCA 90 bp CCAGGGCTTAAGGGGTTGGGAAGATGCGAGAGTCTTAAATTTGGTTCCTTGCTTCACGAGGTCAGGAGATaGAAACCATCCTGGCTAACA +
Preference number: 4 (lower is better)
Translates to: PGLKGLGRCESLKFGSLLHEVRR*KPSWLT
Trigger: TGTTAGCCAGGATGGTTTCCATCTCCTGACCTCGTG...AAGCAAGGAACCAAATTTAAGACTCTCGCATCTTCCCAACCCCTTAAGCCCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458235.7
CDS-3UTR TCA 90 bp GTGTTCAGGAGTCTAATCTTCCCTCACCCTATAAGGCATTACTATTCTCATTTTAGGCTGCATGAACGCTaGGGGATCAGGGGCGTCTCT +
Preference number: 4 (lower is better)
Translates to: VFRSLIFPHPIRHYYSHFRLHER*GIRGVS
Trigger: AGAGACGCCCCTGATCCCTCAGCGTTCATGCAGCCT...AAAATGAGAATAGTAATGCCTTATAGGGTGAGGGAAGATTAGACTCCTGAACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS-3UTR TCA 90 bp AATCTTCCCTCACCCTATAAGGCATTACTATTCTCATTTTGGAAAAGGGTAAACCCAACACGGCCAGGCTaGGACACTCACCCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: NLPSPYKALLFSFWKRVNPTRPG*DTHPAP
Trigger: AGGAGCAGGGTGAGTGTCTCAGCCTGGCCGTGTTGG...GTTTACCCTTTTCCAAAATGAGAATAGTAATGCCTTATAGGGTGAGGGAAGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS-3UTR TCA 90 bp GTGTTCAGGAGTCTAATCTTCCCTCACCCTATAAGGCATTACTATTCTCATTTTTGGGGCTGCGCCGGATaGGGCAGCCCTTATAATCAG +
Preference number: 4 (lower is better)
Translates to: VFRSLIFPHPIRHYYSHFWGCAG*GSPYNQ
Trigger: CTGATTATAAGGGCTGCCTCATCCGGCGCAGCCCCA...AAAATGAGAATAGTAATGCCTTATAGGGTGAGGGAAGATTAGACTCCTGAACAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS-3UTR TCA 90 bp GTGTTCAGGAGTCTAATCTTCCCTCACCCTATAAGGCATTACTATTCTCATTTTGGGCTGAACCAAGGATaGTGTGGGTGGGCTGTGACC +
Preference number: 4 (lower is better)
Translates to: VFRSLIFPHPIRHYYSHFGLNQG*CGWAVT
Trigger: GGTCACAGCCCACCCACATCATCCTTGGTTCAGCCC...AAAATGAGAATAGTAATGCCTTATAGGGTGAGGGAAGATTAGACTCCTGAACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS-3UTR TCA 90 bp GTGTTCAGGAGTCTAATCTTCCCTCACCCTATAAGGCATTACTATTCTCATTTTTTAACACAGCGGGGCTaGCCCCAGGGTCACTCAGCT +
Preference number: 4 (lower is better)
Translates to: VFRSLIFPHPIRHYYSHFLTQRG*PQGHSA
Trigger: AGCTGAGTGACCCTGGGGTCAGCCCCGCTGTGTTAA...AAAATGAGAATAGTAATGCCTTATAGGGTGAGGGAAGATTAGACTCCTGAACAC
48% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS-3UTR TCA 90 bp CTCATAGGCACAGGTGTTCAGGAGTCTAATCTTCCCTCACCCTATAAGGCATTAGCTGTGAGATGTACTTaGGGTGTCTCTCCTCGAAGA +
Preference number: 4 (lower is better)
Translates to: LIGTGVQESNLPSPYKALAVRCT*GVSPRR
Trigger: TCTTCGAGGAGAGACACCTCAAGTACATCTCACAGC...TAATGCCTTATAGGGTGAGGGAAGATTAGACTCCTGAACACCTGTGCCTATGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS-3UTR GCA 90 bp GTGTTCAGGAGTCTAATCTTCCCTCACCCTATAAGGCATTACTATTCTCATTTTCACTGGCCAAATCCTTaGGTAGCCCGAAGCGGTGGC +
Preference number: 4 (lower is better)
Translates to: VFRSLIFPHPIRHYYSHFHWPNP*VARSGG
Trigger: GCCACCGCTTCGGGCTACGCAAGGATTTGGCCAGTG...AAAATGAGAATAGTAATGCCTTATAGGGTGAGGGAAGATTAGACTCCTGAACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS-3UTR GCA 90 bp GTGTTCAGGAGTCTAATCTTCCCTCACCCTATAAGGCATTACTATTCTCATTTTCAAAGTCCTGGGGGCTaGGGCGGAGAACATAGGAGC +
Preference number: 4 (lower is better)
Translates to: VFRSLIFPHPIRHYYSHFQSPGG*GGEHRS
Trigger: GCTCCTATGTTCTCCGCCGCAGCCCCCAGGACTTTG...AAAATGAGAATAGTAATGCCTTATAGGGTGAGGGAAGATTAGACTCCTGAACAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS-3UTR GCA 90 bp CCAGGGCTTAAGGGGTTGGGAAGATGCGAGAGTCTTAAATTTGGTTCCTTGCTTCCAGGAATGACTCCATaGAGTTCTTGTGCTTGGCAT +
Preference number: 4 (lower is better)
Translates to: PGLKGLGRCESLKFGSLLPGMTP*SSCAWH
Trigger: ATGCCAAGCACAAGAACTGCATGGAGTCATTCCTGG...AAGCAAGGAACCAAATTTAAGACTCTCGCATCTTCCCAACCCCTTAAGCCCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR GCA 90 bp CCAGTCAGAAAGTTGACCCTGCACAGCCAAGGGGTAAGCTCTGACCATTTTGCAGAAATCACTGTGCAGTaGTTTGAGGATCTGAATCTC +
Preference number: 4 (lower is better)
Translates to: PVRKLTLHSQGVSSDHFAEITVQ*FEDLNL
Trigger: GAGATTCAGATCCTCAAAGCACTGCACAGTGATTTC...TGCAAAATGGTCAGAGCTTACCCCTTGGCTGTGCAGGGTCAACTTTCTGACTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458235.7
CDS-3UTR GCA 90 bp CATGGAAGGGGCAAAACTGTAGGCTCCAATACTTGGGCTCTTAACCTCCTTACTAGCAGAAGCTTAACCTaGATGAGAATCCCTCTCACC +
Preference number: 4 (lower is better)
Translates to: HGRGKTVGSNTWALNLLTSRSLT*MRIPLT
Trigger: GGTGAGAGGGATTCTCATGCAGGTTAAGCTTCTGCT...AGTAAGGAGGTTAAGAGCCCAAGTATTGGAGCCTACAGTTTTGCCCCTTCCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458235.7
CDS-3UTR CCA 90 bp CTCATAGGCACAGGTGTTCAGGAGTCTAATCTTCCCTCACCCTATAAGGCATTAAGGTCCTCAGCCAAGTaGTCCCCAAAGGAGAAAGAT +
Preference number: 4 (lower is better)
Translates to: LIGTGVQESNLPSPYKALRSSAK*SPKEKD
Trigger: ATCTTTCTCCTTTGGGGACCACTTGGCTGAGGACCT...TAATGCCTTATAGGGTGAGGGAAGATTAGACTCCTGAACACCTGTGCCTATGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS-3UTR CCA 90 bp AATACTTGGGCTCTTAACCTCCTTACTCTGAGCCTTCTCACGCTTGGCATGCTGAATGTCTACGATTTCTaGAAAGTCGCAGAAGGGCTG +
Preference number: 4 (lower is better)
Translates to: NTWALNLLTLSLLTLGMLNVYDF*KVAEGL
Trigger: CAGCCCTTCTGCGACTTTCCAGAAATCGTAGACATT...CAGCATGCCAAGCGTGAGAAGGCTCAGAGTAAGGAGGTTAAGAGCCCAAGTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458235.7
CDS-3UTR CCA 90 bp GTGTTCAGGAGTCTAATCTTCCCTCACCCTATAAGGCATTACTATTCTCATTTTAGTGCTGGGAGTCCGTaGTCAGCCGGAAGTAGCCGT +
Preference number: 4 (lower is better)
Translates to: VFRSLIFPHPIRHYYSHFSAGSP*SAGSSR
Trigger: ACGGCTACTTCCGGCTGACCACGGACTCCCAGCACT...AAAATGAGAATAGTAATGCCTTATAGGGTGAGGGAAGATTAGACTCCTGAACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS-3UTR CCA 90 bp TATGAGGGAAGGCTGCAAGGATGTGGTAGCTGGAGTTTTGAGAGATGGATAAGAGGTTGGACTTTTCTTTaGGTCTGGGGATACAGCAGG +
Preference number: 4 (lower is better)
Translates to: YEGRLQGCGSWSFERWIRGWTFL*VWGYSR
Trigger: CCTGCTGTATCCCCAGACCCAAAGAAAAGTCCAACC...TCTTATCCATCTCTCAAAACTCCAGCTACCACATCCTTGCAGCCTTCCCTCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000458235.7
CDS-3UTR CCA 90 bp TATGAGGGAAGGCTGCAAGGATGTGGTAGCTGGAGTTTTGAGAGATGGATAAGAGGACCACGATCAGGTTaGACTTTTCTTTGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: YEGRLQGCGSWSFERWIRGPRSG*TFLWVW
Trigger: CCAGACCCAAAGAAAAGTCCAACCTGATCGTGGTCC...TCTTATCCATCTCTCAAAACTCCAGCTACCACATCCTTGCAGCCTTCCCTCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458235.7
CDS-3UTR CCA 90 bp CAGGAGTCTAATCTTCCCTCACCCTATAAGGCATTACTATTCTCATTTTGGAAACAGCTTCCAGCTGGCTaGCACCAGGTGGCCACGTTT +
Preference number: 4 (lower is better)
Translates to: QESNLPSPYKALLFSFWKQLPAG*HQVATF
Trigger: AAACGTGGCCACCTGGTGCCAGCCAGCTGGAAGCTG...TTTCCAAAATGAGAATAGTAATGCCTTATAGGGTGAGGGAAGATTAGACTCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS-3UTR CCA 90 bp TCTAATCTTCCCTCACCCTATAAGGCATTACTATTCTCATTTTGGAAAAGGGTACAGAAAATGGGGCTCTaGCCTGGCTCGCGGACCACG +
Preference number: 4 (lower is better)
Translates to: SNLPSPYKALLFSFWKRVQKMGL*PGSRTT
Trigger: CGTGGTCCGCGAGCCAGGCCAGAGCCCCATTTTCTG...TACCCTTTTCCAAAATGAGAATAGTAATGCCTTATAGGGTGAGGGAAGATTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS-3UTR CCA 90 bp CATGGAAGGGGCAAAACTGTAGGCTCCAATACTTGGGCTCTTAACCTCCTTACTCCAAGGAGGCAAAAGTaGCAGAAAAGCTTTGCAGGT +
Preference number: 4 (lower is better)
Translates to: HGRGKTVGSNTWALNLLTPRRQK*QKSFAG
Trigger: ACCTGCAAAGCTTTTCTGCCACTTTTGCCTCCTTGG...AGTAAGGAGGTTAAGAGCCCAAGTATTGGAGCCTACAGTTTTGCCCCTTCCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000458235.7
CDS-3UTR CCA 90 bp TTGCGTGAAAAGTTCCTGCCAGGTTTGGTGTCATCCCTTTGTGCCCCTTGTAGGCAAGGATGTGGTAGCTaGAGTTTTGAGAGATGGATA +
Preference number: 4 (lower is better)
Translates to: LREKFLPGLVSSLCAPCRQGCGS*SFERWI
Trigger: TATCCATCTCTCAAAACTCCAGCTACCACATCCTTG...CCTACAAGGGGCACAAAGGGATGACACCAAACCTGGCAGGAACTTTTCACGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000458235.7
CDS-3UTR TCA 90 bp GTGTTCAGGAGTCTAATCTTCCCTCACCCTATAAGGCATTACTATTCTCATTTTGGCAGGCCTTGTAGCTaGCAGTCTTCAGCAGCTCTC +
Preference number: 4 (lower is better)
Translates to: VFRSLIFPHPIRHYYSHFGRPCS*QSSAAL
Trigger: GAGAGCTGCTGAAGACTGTCAGCTACAAGGCCTGCC...AAAATGAGAATAGTAATGCCTTATAGGGTGAGGGAAGATTAGACTCCTGAACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS-3UTR TCA 90 bp AATCTTCCCTCACCCTATAAGGCATTACTATTCTCATTTTGGAAAAGGGTAAACGATGTGGGTGGGCTGTaGCCTCTCTGGACCACGATC +
Preference number: 4 (lower is better)
Translates to: NLPSPYKALLFSFWKRVNDVGGL*PLWTTI
Trigger: GATCGTGGTCCAGAGAGGTCACAGCCCACCCACATC...GTTTACCCTTTTCCAAAATGAGAATAGTAATGCCTTATAGGGTGAGGGAAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS-3UTR TCA 90 bp CTCATAGGCACAGGTGTTCAGGAGTCTAATCTTCCCTCACCCTATAAGGCATTAGAGGAGCTCATAGTCTaGAGAGATGAGGCTATTGAG +
Preference number: 4 (lower is better)
Translates to: LIGTGVQESNLPSPYKALEELIV*RDEAIE
Trigger: CTCAATAGCCTCATCTCTTCAGACTATGAGCTCCTC...TAATGCCTTATAGGGTGAGGGAAGATTAGACTCCTGAACACCTGTGCCTATGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS-3UTR GCA 90 bp AATCTTCCCTCACCCTATAAGGCATTACTATTCTCATTTTGGAAAAGGGTAAACGCCATGAGTGCAACTTaGCTAGCGGGCAGGGACCCT +
Preference number: 4 (lower is better)
Translates to: NLPSPYKALLFSFWKRVNAMSAT*LAGRDP
Trigger: AGGGTCCCTGCCCGCTAGGCAAGTTGCACTCATGGC...GTTTACCCTTTTCCAAAATGAGAATAGTAATGCCTTATAGGGTGAGGGAAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS-3UTR GCA 90 bp GTGTTCAGGAGTCTAATCTTCCCTCACCCTATAAGGCATTACTATTCTCATTTTTGGAGGTGCCATGAGTaGAACTTGCCTAGCGGGCAG +
Preference number: 4 (lower is better)
Translates to: VFRSLIFPHPIRHYYSHFWRCHE*NLPSGQ
Trigger: CTGCCCGCTAGGCAAGTTGCACTCATGGCACCTCCA...AAAATGAGAATAGTAATGCCTTATAGGGTGAGGGAAGATTAGACTCCTGAACAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS-3UTR GCA 90 bp CAGGAGTCTAATCTTCCCTCACCCTATAAGGCATTACTATTCTCATTTTGGAAATGCTGGGCAAAGAGGTaGTCCAGGACTGGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: QESNLPSPYKALLFSFWKCWAKR*SRTGRS
Trigger: TGACCTGCCAGTCCTGGAGCACCTCTTTGCCCAGCA...TTTCCAAAATGAGAATAGTAATGCCTTATAGGGTGAGGGAAGATTAGACTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS-3UTR GCA 90 bp GTGTTCAGGAGTCTAATCTTCCCTCACCCTATAAGGCATTACTATTCTCATTTTGCGGTGCCACCTCCTTaGAGAAGAAGTGCTGGGAGT +
Preference number: 4 (lower is better)
Translates to: VFRSLIFPHPIRHYYSHFAVPPP*RRSAGS
Trigger: ACTCCCAGCACTTCTTCTGCAAGGAGGTGGCACCGC...AAAATGAGAATAGTAATGCCTTATAGGGTGAGGGAAGATTAGACTCCTGAACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS-3UTR GCA 90 bp GTGTTCAGGAGTCTAATCTTCCCTCACCCTATAAGGCATTACTATTCTCATTTTGGAAGTGAGGGTCACTaGCACCCCATCTACGTGCAG +
Preference number: 4 (lower is better)
Translates to: VFRSLIFPHPIRHYYSHFGSEGH*HPIYVQ
Trigger: CTGCACGTAGATGGGGTGGCAGTGACCCTCACTTCC...AAAATGAGAATAGTAATGCCTTATAGGGTGAGGGAAGATTAGACTCCTGAACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS-3UTR GCA 90 bp CAGGAGTCTAATCTTCCCTCACCCTATAAGGCATTACTATTCTCATTTTGGAAATGGCCCAGGTTCTCATaGCACTCCAGGCTGTCAGCA +
Preference number: 4 (lower is better)
Translates to: QESNLPSPYKALLFSFWKWPRFS*HSRLSA
Trigger: TGCTGACAGCCTGGAGTGGCATGAGAACCTGGGCCA...TTTCCAAAATGAGAATAGTAATGCCTTATAGGGTGAGGGAAGATTAGACTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS-3UTR GCA 90 bp AATCTTCCCTCACCCTATAAGGCATTACTATTCTCATTTTGGAAAAGGGTAAACACTCGGCCGAGGGGCTaGAGCTTTTGTCGCAGTAGG +
Preference number: 4 (lower is better)
Translates to: NLPSPYKALLFSFWKRVNTRPRG*SFCRSR
Trigger: CCTACTGCGACAAAAGCTGCAGCCCCTCGGCCGAGT...GTTTACCCTTTTCCAAAATGAGAATAGTAATGCCTTATAGGGTGAGGGAAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS-3UTR CCA 90 bp TATGAGGGAAGGCTGCAAGGATGTGGTAGCTGGAGTTTTGAGAGATGGATAAGACCAGCCCAAACCAATTaGGGAAGTAAAAGCGAATCC +
Preference number: 4 (lower is better)
Translates to: YEGRLQGCGSWSFERWIRPAQTN*GSKSES
Trigger: GGATTCGCTTTTACTTCCCCAATTGGTTTGGGCTGG...TCTTATCCATCTCTCAAAACTCCAGCTACCACATCCTTGCAGCCTTCCCTCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458235.7
CDS-3UTR CCA 90 bp TCTAATCTTCCCTCACCCTATAAGGCATTACTATTCTCATTTTGGAAAAGGGTACGTAGCCCGAAGCGGTaGCACTTCTCCAGCCCAAAC +
Preference number: 4 (lower is better)
Translates to: SNLPSPYKALLFSFWKRVRSPKR*HFSSPN
Trigger: GTTTGGGCTGGAGAAGTGCCACCGCTTCGGGCTACG...TACCCTTTTCCAAAATGAGAATAGTAATGCCTTATAGGGTGAGGGAAGATTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS-3UTR CCA 90 bp TCTAATCTTCCCTCACCCTATAAGGCATTACTATTCTCATTTTGGAAAAGGGTAACGAAGCTCAGGCCCTaGATCAGGTCGCGCAGGCTT +
Preference number: 4 (lower is better)
Translates to: SNLPSPYKALLFSFWKRVTKLRP*IRSRRL
Trigger: AAGCCTGCGCGACCTGATCCAGGGCCTGAGCTTCGT...TACCCTTTTCCAAAATGAGAATAGTAATGCCTTATAGGGTGAGGGAAGATTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS-3UTR CCA 90 bp CAGGAGTCTAATCTTCCCTCACCCTATAAGGCATTACTATTCTCATTTTGGAAAAAGTCGCAGAAGGGCTaGAGGACCTCCTGTTCTCCC +
Preference number: 4 (lower is better)
Translates to: QESNLPSPYKALLFSFWKKSQKG*RTSCSP
Trigger: GGGAGAACAGGAGGTCCTCCAGCCCTTCTGCGACTT...TTTCCAAAATGAGAATAGTAATGCCTTATAGGGTGAGGGAAGATTAGACTCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS-3UTR CCA 90 bp AATCTTCCCTCACCCTATAAGGCATTACTATTCTCATTTTGGAAAAGGGTAAACTCTCGAAGACTGCTGTaGGGTCGGCTGAGGCCAACC +
Preference number: 4 (lower is better)
Translates to: NLPSPYKALLFSFWKRVNSRRLL*GRLRPT
Trigger: GGTTGGCCTCAGCCGACCCCACAGCAGTCTTCGAGA...GTTTACCCTTTTCCAAAATGAGAATAGTAATGCCTTATAGGGTGAGGGAAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS-3UTR CCA 90 bp TCTAATCTTCCCTCACCCTATAAGGCATTACTATTCTCATTTTGGAAAAGGGTACCAGGGCACCAGGTGTaGGGTCTGAGAGGAGCTCAT +
Preference number: 4 (lower is better)
Translates to: SNLPSPYKALLFSFWKRVPGHQV*GLRGAH
Trigger: ATGAGCTCCTCTCAGACCCCACACCTGGTGCCCTGG...TACCCTTTTCCAAAATGAGAATAGTAATGCCTTATAGGGTGAGGGAAGATTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS-3UTR TCA 90 bp TCTAATCTTCCCTCACCCTATAAGGCATTACTATTCTCATTTTGGAAAAGGGTACGAAGTCAGCGATCTTaGCGTGTGCCTCGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: SNLPSPYKALLFSFWKRVRSQRS*RVPRSP
Trigger: TGGAGAGCGAGGCACACGTCAAGATCGCTGACTTCG...TACCCTTTTCCAAAATGAGAATAGTAATGCCTTATAGGGTGAGGGAAGATTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS-3UTR TCA 90 bp CCAGTCAGAAAGTTGACCCTGCACAGCCAAGGGGTAAGCTCTGACCATTTTGCATATGCCCATCTGTCTTaGACCTTAACAAATTGCAAA +
Preference number: 4 (lower is better)
Translates to: PVRKLTLHSQGVSSDHFAYAHLS*TLTNCK
Trigger: TTTGCAATTTGTTAAGGTTCAAGACAGATGGGCATA...TGCAAAATGGTCAGAGCTTACCCCTTGGCTGTGCAGGGTCAACTTTCTGACTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458235.7
CDS-3UTR GCA 90 bp GTGTTCAGGAGTCTAATCTTCCCTCACCCTATAAGGCATTACTATTCTCATTTTCCGTGGACAAGAGGCTaGATGAACGCTGAGGGATCA +
Preference number: 4 (lower is better)
Translates to: VFRSLIFPHPIRHYYSHFPWTRG*MNAEGS
Trigger: TGATCCCTCAGCGTTCATGCAGCCTCTTGTCCACGG...AAAATGAGAATAGTAATGCCTTATAGGGTGAGGGAAGATTAGACTCCTGAACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS-3UTR GCA 90 bp AATCTTCCCTCACCCTATAAGGCATTACTATTCTCATTTTGGAAAAGGGTAAACCACTCACCAGGTCACTaGGGTGCTGGGCAAAGAGGT +
Preference number: 4 (lower is better)
Translates to: NLPSPYKALLFSFWKRVNHSPGH*GAGQRG
Trigger: ACCTCTTTGCCCAGCACCGCAGTGACCTGGTGAGTG...GTTTACCCTTTTCCAAAATGAGAATAGTAATGCCTTATAGGGTGAGGGAAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS-3UTR GCA 90 bp AATCTTCCCTCACCCTATAAGGCATTACTATTCTCATTTTGGAAAAGGGTAAACCTGAGACACTCACCCTaGTCCTTGAGACTGAGGCCC +
Preference number: 4 (lower is better)
Translates to: NLPSPYKALLFSFWKRVNLRHSP*SLRLRP
Trigger: GGGCCTCAGTCTCAAGGAGCAGGGTGAGTGTCTCAG...GTTTACCCTTTTCCAAAATGAGAATAGTAATGCCTTATAGGGTGAGGGAAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS-3UTR GCA 90 bp TCTAATCTTCCCTCACCCTATAAGGCATTACTATTCTCATTTTGGAAAAGGGTATGGAGCAGCACGAGATaGCGGTACGACACTTGGCTC +
Preference number: 4 (lower is better)
Translates to: SNLPSPYKALLFSFWKRVWSSTR*RYDTWL
Trigger: GAGCCAAGTGTCGTACCGGCATCTCGTGCTGCTCCA...TACCCTTTTCCAAAATGAGAATAGTAATGCCTTATAGGGTGAGGGAAGATTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS-3UTR GCA 90 bp TCTAATCTTCCCTCACCCTATAAGGCATTACTATTCTCATTTTGGAAAAGGGTAAGCTGTTTGACCACCTaGAGCTTCCAGCTGGCTGGC +
Preference number: 4 (lower is better)
Translates to: SNLPSPYKALLFSFWKRVSCLTT*SFQLAG
Trigger: GCCAGCCAGCTGGAAGCTGCAGGTGGTCAAACAGCT...TACCCTTTTCCAAAATGAGAATAGTAATGCCTTATAGGGTGAGGGAAGATTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS-3UTR GCA 90 bp CCAGGGCTTAAGGGGTTGGGAAGATGCGAGAGTCTTAAATTTGGTTCCTTGCTTAAGGGGTTGGGAAGATaGGAGAGTCTTAAATTTGGT +
Preference number: 4 (lower is better)
Translates to: PGLKGLGRCESLKFGSLLKGLGR*ESLKFG
Trigger: ACCAAATTTAAGACTCTCGCATCTTCCCAACCCCTT...AAGCAAGGAACCAAATTTAAGACTCTCGCATCTTCCCAACCCCTTAAGCCCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR CCA 90 bp TCTAATCTTCCCTCACCCTATAAGGCATTACTATTCTCATTTTGGAAAAGGGTAAGGACAGGTCCTCCGTaGCCAGAGCAAAGAGGGAGT +
Preference number: 4 (lower is better)
Translates to: SNLPSPYKALLFSFWKRVRTGPP*PEQRGS
Trigger: ACTCCCTCTTTGCTCTGGCCACGGAGGACCTGTCCT...TACCCTTTTCCAAAATGAGAATAGTAATGCCTTATAGGGTGAGGGAAGATTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS-3UTR CCA 90 bp TCTAATCTTCCCTCACCCTATAAGGCATTACTATTCTCATTTTGGAAAAGGGTAGCAGGACTTGGGTGCTaGCATCCTCCACGGAGAAGA +
Preference number: 4 (lower is better)
Translates to: SNLPSPYKALLFSFWKRVAGLGC*HPPRRR
Trigger: TCTTCTCCGTGGAGGATGCCAGCACCCAAGTCCTGC...TACCCTTTTCCAAAATGAGAATAGTAATGCCTTATAGGGTGAGGGAAGATTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS-3UTR CCA 90 bp CTCATAGGCACAGGTGTTCAGGAGTCTAATCTTCCCTCACCCTATAAGGCATTAGCAGATACATGTCTATaGCCCCCAGGTGTACAAATT +
Preference number: 4 (lower is better)
Translates to: LIGTGVQESNLPSPYKALADTCL*PPGVQI
Trigger: AATTTGTACACCTGGGGGCCATAGACATGTATCTGC...TAATGCCTTATAGGGTGAGGGAAGATTAGACTCCTGAACACCTGTGCCTATGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS-3UTR CCA 90 bp AATCTTCCCTCACCCTATAAGGCATTACTATTCTCATTTTGGAAAAGGGTAAACCTGGCTGGCACCAGGTaGCCACGTTTTCGCAGATAC +
Preference number: 4 (lower is better)
Translates to: NLPSPYKALLFSFWKRVNLAGTR*PRFRRY
Trigger: GTATCTGCGAAAACGTGGCCACCTGGTGCCAGCCAG...GTTTACCCTTTTCCAAAATGAGAATAGTAATGCCTTATAGGGTGAGGGAAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS-3UTR CCA 90 bp TTGCGTGAAAAGTTCCTGCCAGGTTTGGTGTCATCCCTTTGTGCCCCTTGTAGGTGGAGTTTTGAGAGATaGATAAGAGTTTTCCAAGGA +
Preference number: 4 (lower is better)
Translates to: LREKFLPGLVSSLCAPCRWSFER*IRVFQG
Trigger: TCCTTGGAAAACTCTTATCCATCTCTCAAAACTCCA...CCTACAAGGGGCACAAAGGGATGACACCAAACCTGGCAGGAACTTTTCACGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000458235.7
CDS-3UTR CCA 90 bp TCTAATCTTCCCTCACCCTATAAGGCATTACTATTCTCATTTTGGAAAAGGGTAGAGAGAGTAGCCAAGTaGGGGCCAGGATCCTCATCG +
Preference number: 4 (lower is better)
Translates to: SNLPSPYKALLFSFWKRVERVAK*GPGSSS
Trigger: CGATGAGGATCCTGGCCCCCACTTGGCTACTCTCTC...TACCCTTTTCCAAAATGAGAATAGTAATGCCTTATAGGGTGAGGGAAGATTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS-3UTR TCA 90 bp CAGGAGTCTAATCTTCCCTCACCCTATAAGGCATTACTATTCTCATTTTGGAAACACTGTGCAGTGCTTTaGGGATCTGAATCTCCCGCT +
Preference number: 4 (lower is better)
Translates to: QESNLPSPYKALLFSFWKHCAVL*GSESPA
Trigger: AGCGGGAGATTCAGATCCTCAAAGCACTGCACAGTG...TTTCCAAAATGAGAATAGTAATGCCTTATAGGGTGAGGGAAGATTAGACTCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS-3UTR GCA 90 bp AATCTTCCCTCACCCTATAAGGCATTACTATTCTCATTTTGGAAAAGGGTAAACTCCTTGCAGAAGAAGTaGTGGGAGTCCGTGGTCAGC +
Preference number: 4 (lower is better)
Translates to: NLPSPYKALLFSFWKRVNSLQKK*WESVVS
Trigger: GCTGACCACGGACTCCCAGCACTTCTTCTGCAAGGA...GTTTACCCTTTTCCAAAATGAGAATAGTAATGCCTTATAGGGTGAGGGAAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS-3UTR CCA 90 bp TCTAATCTTCCCTCACCCTATAAGGCATTACTATTCTCATTTTGGAAAAGGGTAAGAGCAAAGAGGGAGTaGTACACAGGCAGGATGCCG +
Preference number: 4 (lower is better)
Translates to: SNLPSPYKALLFSFWKRVRAKRE*YTGRMP
Trigger: CGGCATCCTGCCTGTGTACCACTCCCTCTTTGCTCT...TACCCTTTTCCAAAATGAGAATAGTAATGCCTTATAGGGTGAGGGAAGATTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS-3UTR CCA 90 bp ATAGGCACAGGTGTTCAGGAGTCTAATCTTCCCTCACCCTATAAGGCATTACTAAATGTCTACGATTTCTaGAAAGTCGCAGAAGGGCTG +
Preference number: 4 (lower is better)
Translates to: IGTGVQESNLPSPYKALLNVYDF*KVAEGL
Trigger: CAGCCCTTCTGCGACTTTCCAGAAATCGTAGACATT...TAGTAATGCCTTATAGGGTGAGGGAAGATTAGACTCCTGAACACCTGTGCCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS-3UTR CCA 90 bp GTGTTCAGGAGTCTAATCTTCCCTCACCCTATAAGGCATTACTATTCTCATTTTGAACCAAGGATGATGTaGGTGGGCTGTGACCTCTCT +
Preference number: 4 (lower is better)
Translates to: VFRSLIFPHPIRHYYSHFEPRMM*VGCDLS
Trigger: AGAGAGGTCACAGCCCACCCACATCATCCTTGGTTC...AAAATGAGAATAGTAATGCCTTATAGGGTGAGGGAAGATTAGACTCCTGAACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS-3UTR CCA 90 bp TCTAATCTTCCCTCACCCTATAAGGCATTACTATTCTCATTTTGGAAAAGGGTATTGGTGAAGGACCCATaGCCCAGGTTCTCATGCCAC +
Preference number: 4 (lower is better)
Translates to: SNLPSPYKALLFSFWKRVLVKDP*PRFSCH
Trigger: GTGGCATGAGAACCTGGGCCATGGGTCCTTCACCAA...TACCCTTTTCCAAAATGAGAATAGTAATGCCTTATAGGGTGAGGGAAGATTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS-3UTR CCA 90 bp AATCTTCCCTCACCCTATAAGGCATTACTATTCTCATTTTGGAAAAGGGTAAACTGCCGGTACGACACTTaGCTCATCAAGCTCGCTGCT +
Preference number: 4 (lower is better)
Translates to: NLPSPYKALLFSFWKRVNCRYDT*LIKLAA
Trigger: AGCAGCGAGCTTGATGAGCCAAGTGTCGTACCGGCA...GTTTACCCTTTTCCAAAATGAGAATAGTAATGCCTTATAGGGTGAGGGAAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS-3UTR TCA 90 bp CAGGAGTCTAATCTTCCCTCACCCTATAAGGCATTACTATTCTCATTTTGGAAATCTGGACACAGACAGTaGGGAGGAAGCTGTCAAAGT +
Preference number: 4 (lower is better)
Translates to: QESNLPSPYKALLFSFWKSGHRQ*GGSCQS
Trigger: ACTTTGACAGCTTCCTCCTCACTGTCTGTGTCCAGA...TTTCCAAAATGAGAATAGTAATGCCTTATAGGGTGAGGGAAGATTAGACTCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS-3UTR TCA 90 bp TCTAATCTTCCCTCACCCTATAAGGCATTACTATTCTCATTTTGGAAAAGGGTACGCTGCTTCCAGGAATaGCTCCATGCAGTTCTTGTG +
Preference number: 4 (lower is better)
Translates to: SNLPSPYKALLFSFWKRVRCFQE*LHAVLV
Trigger: CACAAGAACTGCATGGAGTCATTCCTGGAAGCAGCG...TACCCTTTTCCAAAATGAGAATAGTAATGCCTTATAGGGTGAGGGAAGATTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS-3UTR TCA 90 bp CCAGGGCTTAAGGGGTTGGGAAGATGCGAGAGTCTTAAATTTGGTTCCTTGCTTTATGCCCATCTGTCTTaGACCTTAACAAATTGCAAA +
Preference number: 4 (lower is better)
Translates to: PGLKGLGRCESLKFGSLLYAHLS*TLTNCK
Trigger: TTTGCAATTTGTTAAGGTTCAAGACAGATGGGCATA...AAGCAAGGAACCAAATTTAAGACTCTCGCATCTTCCCAACCCCTTAAGCCCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR GCA 90 bp ATAGGCACAGGTGTTCAGGAGTCTAATCTTCCCTCACCCTATAAGGCATTACTAGAAATCACTGTGCAGTaGTTTGAGGATCTGAATCTC +
Preference number: 4 (lower is better)
Translates to: IGTGVQESNLPSPYKALLEITVQ*FEDLNL
Trigger: GAGATTCAGATCCTCAAAGCACTGCACAGTGATTTC...TAGTAATGCCTTATAGGGTGAGGGAAGATTAGACTCCTGAACACCTGTGCCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS-3UTR CCA 90 bp GTGTTCAGGAGTCTAATCTTCCCTCACCCTATAAGGCATTACTATTCTCATTTTGGACCACGATCAGGTTaGACTTTTCTTTGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: VFRSLIFPHPIRHYYSHFGPRSG*TFLWVW
Trigger: CCAGACCCAAAGAAAAGTCCAACCTGATCGTGGTCC...AAAATGAGAATAGTAATGCCTTATAGGGTGAGGGAAGATTAGACTCCTGAACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS-3UTR TCA 90 bp AATCTTCCCTCACCCTATAAGGCATTACTATTCTCATTTTGGAAAAGGGTAAACGGTAAACTGAGGCTCTaGAAGTGCTCTGACTTGCCA +
Preference number: 4 (lower is better)
Translates to: NLPSPYKALLFSFWKRVNGKLRL*KCSDLP
Trigger: TGGCAAGTCAGAGCACTTTCAGAGCCTCAGTTTACC...GTTTACCCTTTTCCAAAATGAGAATAGTAATGCCTTATAGGGTGAGGGAAGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS-3UTR TCA 90 bp GTGTTCAGGAGTCTAATCTTCCCTCACCCTATAAGGCATTACTATTCTCATTTTTGGAAAAGGGTAAACTaGGGCTCTGAAAGTGCTCTG +
Preference number: 4 (lower is better)
Translates to: VFRSLIFPHPIRHYYSHFWKRVN*GSESAL
Trigger: CAGAGCACTTTCAGAGCCTCAGTTTACCCTTTTCCA...AAAATGAGAATAGTAATGCCTTATAGGGTGAGGGAAGATTAGACTCCTGAACAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS-3UTR GCA 90 bp AATCTTCCCTCACCCTATAAGGCATTACTATTCTCATTTTGGAAAAGGGTAAACGGTACTCCATGCCCTTaGAGATCTGCGAGGAATAGA +
Preference number: 4 (lower is better)
Translates to: NLPSPYKALLFSFWKRVNGTPCP*RSARNR
Trigger: TCTATTCCTCGCAGATCTGCAAGGGCATGGAGTACC...GTTTACCCTTTTCCAAAATGAGAATAGTAATGCCTTATAGGGTGAGGGAAGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS-3UTR CCA 90 bp AATCTTCCCTCACCCTATAAGGCATTACTATTCTCATTTTGGAAAAGGGTAAACGGTTGGACTTTTCTTTaGGTCTGGGGATACAGCAGG +
Preference number: 4 (lower is better)
Translates to: NLPSPYKALLFSFWKRVNGWTFL*VWGYSR
Trigger: CCTGCTGTATCCCCAGACCCAAAGAAAAGTCCAACC...GTTTACCCTTTTCCAAAATGAGAATAGTAATGCCTTATAGGGTGAGGGAAGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS-3UTR CCA 90 bp TCTAATCTTCCCTCACCCTATAAGGCATTACTATTCTCATTTTGGAAAAGGGTACGTCACCACCATTTATaGAGCATCGACTGTGTGCTC +
Preference number: 4 (lower is better)
Translates to: SNLPSPYKALLFSFWKRVRHHHL*SIDCVL
Trigger: GAGCACACAGTCGATGCTCCATAAATGGTGGTGACG...TACCCTTTTCCAAAATGAGAATAGTAATGCCTTATAGGGTGAGGGAAGATTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS-3UTR GCA 90 bp AATCTTCCCTCACCCTATAAGGCATTACTATTCTCATTTTGGAAAAGGGTAAACTCCATGCAGTTCTTGTaGTTGGCATCCATGACCTTC +
Preference number: 4 (lower is better)
Translates to: NLPSPYKALLFSFWKRVNSMQFL*LASMTF
Trigger: GAAGGTCATGGATGCCAAGCACAAGAACTGCATGGA...GTTTACCCTTTTCCAAAATGAGAATAGTAATGCCTTATAGGGTGAGGGAAGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS-3UTR GCA 90 bp AATCTTCCCTCACCCTATAAGGCATTACTATTCTCATTTTGGAAAAGGGTAAACAGGTGTACAAATTCCTaGACCATGGTGCTGTCTCCA +
Preference number: 4 (lower is better)
Translates to: NLPSPYKALLFSFWKRVNRCTNS*TMVLSP
Trigger: TGGAGACAGCACCATGGTGCAGGAATTTGTACACCT...GTTTACCCTTTTCCAAAATGAGAATAGTAATGCCTTATAGGGTGAGGGAAGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS CCA 90 bp GCGATGCCGCCGTCACCAGCCACGCGGAGCAGCCCCAGCCCGTCGTaGCCACCAAGGGCCCCAGGGAGGCCCACGTGGAAGGTCTCGGCG +
Preference number: 5 (lower is better)
Translates to: AMPPSPATRSSPSPS*PPRAPGRPTWKVSA
Trigger: CGCCGAGACCTTCCACGTGGGCCTCCCTGGGGCCCTTGGTGGCCACGACGGGCTGGGGCTGCTCCGCGTGGCTGGTGACGGCGGCATCGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000458235.7
ENST00000526008.5
ENST00000527031.5
ENST00000527670.5
ENST00000528705.1
ENST00000534444.1
CDS GCA 90 bp GCGAGTGCCGGTCTGCCTGGCAGGCGGCCACGCGGCGCAGGGCTCTaGGCACCGTCCTCCGAATACGCCTCCGCGTCACGAAGCTCAGGC +
Preference number: 5 (lower is better)
Translates to: ASAGLPGRRPRGAGL*APSSEYASASRSSG
Trigger: GCCTGAGCTTCGTGACGCGGAGGCGTATTCGGAGGACGGTGCGCAGAGCCCTGCGCCGCGTGGCCGCCTGCCAGGCAGACCGGCACTCGC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000458235.7
ENST00000526008.5
ENST00000527031.5
ENST00000527670.5
ENST00000528293.1
ENST00000534444.1
CDS GCA 90 bp CGCAGAAGGGCTGGAGGACCTCCTGTTCTCCCTGGGTCCAGGCGATaGCGCCGTCACCAGCCACGCGGAGCAGCCCCAGCCCGTCGTGGC +
Preference number: 5 (lower is better)
Translates to: RRRAGGPPVLPGSRR*RRHQPRGAAPARRG
Trigger: GCCACGACGGGCTGGGGCTGCTCCGCGTGGCTGGTGACGGCGGCATCGCCTGGACCCAGGGAGAACAGGAGGTCCTCCAGCCCTTCTGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000458235.7
ENST00000526008.5
ENST00000527031.5
ENST00000527670.5
ENST00000528705.1
ENST00000534444.1
CDS GCA 90 bp CCGCTCCAGGTCCATGATGTACTTGGCCATGAGCGAGTGCCGGTCTaGCTGGCAGGCGGCCACGCGGCGCAGGGCTCTGCGCACCGTCCT +
Preference number: 5 (lower is better)
Translates to: PLQVHDVLGHERVPV*LAGGHAAQGSAHRP
Trigger: AGGACGGTGCGCAGAGCCCTGCGCCGCGTGGCCGCCTGCCAGGCAGACCGGCACTCGCTCATGGCCAAGTACATCATGGACCTGGAGCGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000458235.7
ENST00000526008.5
ENST00000527031.5
ENST00000527670.5
ENST00000528293.1
ENST00000534444.1
CDS GCA 90 bp GGATCCAGCCGCTCCAGGTCCATGATGTACTTGGCCATGAGCGAGTaGCGGTCTGCCTGGCAGGCGGCCACGCGGCGCAGGGCTCTGCGC +
Preference number: 5 (lower is better)
Translates to: GSSRSRSMMYLAMSE*RSAWQAATRRRALR
Trigger: GCGCAGAGCCCTGCGCCGCGTGGCCGCCTGCCAGGCAGACCGGCACTCGCTCATGGCCAAGTACATCATGGACCTGGAGCGGCTGGATCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000458235.7
ENST00000526008.5
ENST00000527031.5
ENST00000527670.5
ENST00000528293.1
ENST00000534444.1
CDS GCA 90 bp GCCATCCGGGCCAGGTCCAACACGGCCAGGCTGAGACACTCACCCTaGTCCTTGAGACTGAGGCCCACGGGGAGGCGCCCACTCACCAGG +
Preference number: 5 (lower is better)
Translates to: AIRARSNTARLRHSP*SLRLRPTGRRPLTR
Trigger: CCTGGTGAGTGGGCGCCTCCCCGTGGGCCTCAGTCTCAAGGAGCAGGGTGAGTGTCTCAGCCTGGCCGTGTTGGACCTGGCCCGGATGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000458235.7
ENST00000526008.5
ENST00000527031.5
ENST00000527670.5
ENST00000528293.1
ENST00000534444.1
CDS CCA 90 bp TCCAGGTCCATGATGTACTTGGCCATGAGCGAGTGCCGGTCTGCCTaGCAGGCGGCCACGCGGCGCAGGGCTCTGCGCACCGTCCTCCGA +
Preference number: 5 (lower is better)
Translates to: SRSMMYLAMSECRSA*QAATRRRALRTVLR
Trigger: TCGGAGGACGGTGCGCAGAGCCCTGCGCCGCGTGGCCGCCTGCCAGGCAGACCGGCACTCGCTCATGGCCAAGTACATCATGGACCTGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000458235.7
ENST00000526008.5
ENST00000527031.5
ENST00000527670.5
ENST00000528293.1
ENST00000534444.1
CDS GCA 90 bp GAACTCCATGGTGGGAGCCCGGCAAAGCCCCGATGGAGCCCACGTTaGTCACTCCCAAGCAGAGGCCGTCCCCACAGCCTGGTGGCTCTC +
Preference number: 5 (lower is better)
Translates to: ELHGGSPAKPRWSPR*SLPSRGRPHSLVAL
Trigger: GAGAGCCACCAGGCTGTGGGGACGGCCTCTGCTTGGGAGTGAGCAACGTGGGCTCCATCGGGGCTTTGCCGGGCTCCCACCATGGAGTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528293.1
CDS CCA 90 bp ACTCCATGCCCTTGCAGATCTGCGAGGAATAGAGAAGGAGGCGGCTaGCATCGAGGCGCGCGCGGTGCCGCTGCAGGAAGTCGCGCAAGC +
Preference number: 5 (lower is better)
Translates to: TPCPCRSARNREGGG*HRGARGAAAGSRAS
Trigger: GCTTGCGCGACTTCCTGCAGCGGCACCGCGCGCGCCTCGATGCCAGCCGCCTCCTTCTCTATTCCTCGCAGATCTGCAAGGGCATGGAGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000458235.7
ENST00000527670.5
ENST00000534444.1
CDS-3UTR CAA 90 bp CCTGAAGTAGAGGACCCTCATAAGGCCTCTGAGGCCCAGAGAGGGGCAGCTCCGAGGATGCCGCTGGCCTaGGCAGCCTGCACGCACAGG +
Preference number: 5 (lower is better)
Translates to: PEVEDPHKASEAQRGAAPRMPLA*AACTHR
Trigger: CCTGTGCGTGCAGGCTGCCAAGGCCAGCGGCATCCT...CGGAGCTGCCCCTCTCTGGGCCTCAGAGGCCTTATGAGGGTCCTCTACTTCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS GCA 90 bp ACTGCTCGGCCACTTCCTCCAGCAGCCTCGGCGGTGCCACCTCCTTaGAGAAGAAGTGCTGGGAGTCCGTGGTCAGCCGGAAGTAGCCGT +
Preference number: 5 (lower is better)
Translates to: TARPLPPAASAVPPP*RRSAGSPWSAGSSR
Trigger: ACGGCTACTTCCGGCTGACCACGGACTCCCAGCACTTCTTCTGCAAGGAGGTGGCACCGCCGAGGCTGCTGGAGGAAGTGGCCGAGCAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000458235.7
ENST00000526008.5
ENST00000527031.5
ENST00000527670.5
ENST00000528705.1
ENST00000534444.1
CDS CCA 90 bp AAGCTTGCAGGAGAACTCCATGGTGGGAGCCCGGCAAAGCCCCGATaGAGCCCACGTTGCTCACTCCCAAGCAGAGGCCGTCCCCACAGC +
Preference number: 5 (lower is better)
Translates to: KLAGELHGGSPAKPR*SPRCSLPSRGRPHS
Trigger: GCTGTGGGGACGGCCTCTGCTTGGGAGTGAGCAACGTGGGCTCCATCGGGGCTTTGCCGGGCTCCCACCATGGAGTTCTCCTGCAAGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528293.1
CDS TCA 90 bp GGAGAGGGCTGGGTTCGTGGGAGGCCCTGGGTCATAGGAACACCCTaGAAGCTTGCAGGAGAACTCCATGGTGGGAGCCCGGCAAAGCCC +
Preference number: 5 (lower is better)
Translates to: GEGWVRGRPWVIGTP*KLAGELHGGSPAKP
Trigger: GGGCTTTGCCGGGCTCCCACCATGGAGTTCTCCTGCAAGCTTTCAGGGTGTTCCTATGACCCAGGGCCTCCCACGAACCCAGCCCTCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528293.1
CDS GCA 90 bp CGGGCAGCAGCACATGCAGGGCACCAGCCTCCGTGGACAAGAGGCTaGATGAACGCTGAGGGATCAGGGGCGTCTCTTCACTTGGAGGTG +
Preference number: 5 (lower is better)
Translates to: RAAAHAGHQPPWTRG*MNAEGSGASLHLEV
Trigger: CACCTCCAAGTGAAGAGACGCCCCTGATCCCTCAGCGTTCATGCAGCCTCTTGTCCACGGAGGCTGGTGCCCTGCATGTGCTGCTGCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000458235.7
ENST00000526008.5
ENST00000527031.5
ENST00000527670.5
ENST00000528293.1
ENST00000534444.1
CDS GCA 90 bp ACAGTGACCAGGCGGTGCTCTCCGGCCGGGCCAACGCGCGGGGCCTaGTTGATGCTAATGTCTACGATTTCTGGAAAGTCGCAGAAGGGC +
Preference number: 5 (lower is better)
Translates to: TVTRRCSPAGPTRGA*LMLMSTISGKSQKG
Trigger: GCCCTTCTGCGACTTTCCAGAAATCGTAGACATTAGCATCAAGCAGGCCCCGCGCGTTGGCCCGGCCGGAGAGCACCGCCTGGTCACTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000458235.7
ENST00000526008.5
ENST00000527031.5
ENST00000527670.5
ENST00000528705.1
ENST00000534444.1
CDS GCA 90 bp CTGGGTTCGTGGGAGGCCCTGGGTCATAGGAACACCCTGAAAGCTTaGAGGAGAACTCCATGGTGGGAGCCCGGCAAAGCCCCGATGGAG +
Preference number: 5 (lower is better)
Translates to: LGSWEALGHRNTLKA*RRTPWWEPGKAPME
Trigger: CTCCATCGGGGCTTTGCCGGGCTCCCACCATGGAGTTCTCCTGCAAGCTTTCAGGGTGTTCCTATGACCCAGGGCCTCCCACGAACCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528293.1
CDS TCA 90 bp CAGCAGCACATGCAGGGCACCAGCCTCCGTGGACAAGAGGCTGCATaGACGCTGAGGGATCAGGGGCGTCTCTTCACTTGGAGGTGCCAT +
Preference number: 5 (lower is better)
Translates to: QQHMQGTSLRGQEAA*TLRDQGRLFTWRCH
Trigger: ATGGCACCTCCAAGTGAAGAGACGCCCCTGATCCCTCAGCGTTCATGCAGCCTCTTGTCCACGGAGGCTGGTGCCCTGCATGTGCTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000458235.7
ENST00000526008.5
ENST00000527031.5
ENST00000527670.5
ENST00000528293.1
ENST00000534444.1
CDS GCA 90 bp GCCTCTAAAATCTGGTTGTCTGTCCTGGTAACAGTGACCAGGCGGTaGTCTCCGGCCGGGCCAACGCGCGGGGCCTGCTTGATGCTAATG +
Preference number: 5 (lower is better)
Translates to: ASKIWLSVLVTVTRR*SPAGPTRGACLMLM
Trigger: CATTAGCATCAAGCAGGCCCCGCGCGTTGGCCCGGCCGGAGAGCACCGCCTGGTCACTGTTACCAGGACAGACAACCAGATTTTAGAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000458235.7
ENST00000526008.5
ENST00000527031.5
ENST00000527670.5
ENST00000528705.1
ENST00000534444.1
CDS CCA 90 bp CTGGGTCATAGGAACACCCTGAAAGCTTGCAGGAGAACTCCATGGTaGGAGCCCGGCAAAGCCCCGATGGAGCCCACGTTGCTCACTCCC +
Preference number: 5 (lower is better)
Translates to: LGHRNTLKACRRTPW*EPGKAPMEPTLLTP
Trigger: GGGAGTGAGCAACGTGGGCTCCATCGGGGCTTTGCCGGGCTCCCACCATGGAGTTCTCCTGCAAGCTTTCAGGGTGTTCCTATGACCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528293.1
CDS CCA 90 bp GCCCTGGGTCATAGGAACACCCTGAAAGCTTGCAGGAGAACTCCATaGTGGGAGCCCGGCAAAGCCCCGATGGAGCCCACGTTGCTCACT +
Preference number: 5 (lower is better)
Translates to: ALGHRNTLKACRRTP*WEPGKAPMEPTLLT
Trigger: AGTGAGCAACGTGGGCTCCATCGGGGCTTTGCCGGGCTCCCACCATGGAGTTCTCCTGCAAGCTTTCAGGGTGTTCCTATGACCCAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528293.1
CDS-3UTR CAA 90 bp GGTGTTCCTGAAGTAGAGGACCCTCATAAGGCCTCTGAGGCCCAGAGAGGGGCAGCACTGGCCAAATCCTaGCGTAGCCCGAAGCGGTGG +
Preference number: 5 (lower is better)
Translates to: GVPEVEDPHKASEAQRGAALAKS*RSPKRW
Trigger: CCACCGCTTCGGGCTACGCAAGGATTTGGCCAGTGC...TGCCCCTCTCTGGGCCTCAGAGGCCTTATGAGGGTCCTCTACTTCAGGAACACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS TCA 90 bp ACATGCAGGGCACCAGCCTCCGTGGACAAGAGGCTGCATGAACGCTaGGGGATCAGGGGCGTCTCTTCACTTGGAGGTGCCATGAGTGCA +
Preference number: 5 (lower is better)
Translates to: TCRAPASVDKRLHER*GIRGVSSLGGAMSA
Trigger: TGCACTCATGGCACCTCCAAGTGAAGAGACGCCCCTGATCCCTCAGCGTTCATGCAGCCTCTTGTCCACGGAGGCTGGTGCCCTGCATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000458235.7
ENST00000526008.5
ENST00000527031.5
ENST00000527670.5
ENST00000528293.1
ENST00000534444.1
CDS CCA 90 bp CGGGCCAACGCGCGGGGCCTGCTTGATGCTAATGTCTACGATTTCTaGAAAGTCGCAGAAGGGCTGGAGGACCTCCTGTTCTCCCTGGGT +
Preference number: 5 (lower is better)
Translates to: RANARGLLDANVYDF*KVAEGLEDLLFSLG
Trigger: ACCCAGGGAGAACAGGAGGTCCTCCAGCCCTTCTGCGACTTTCCAGAAATCGTAGACATTAGCATCAAGCAGGCCCCGCGCGTTGGCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000458235.7
ENST00000526008.5
ENST00000527031.5
ENST00000527670.5
ENST00000528705.1
ENST00000534444.1
CDS CCA 90 bp TGCTTTGAGGATCTGAATCTCCCGCTGAAAGTCCCTCTGCTGGTCTaGCCCGCTGTGCTGCAGCTGTTTCACGGCCACCAGGGCACCTGT +
Preference number: 5 (lower is better)
Translates to: CFEDLNLPLKVPLLV*PAVLQLFHGHQGTC
Trigger: ACAGGTGCCCTGGTGGCCGTGAAACAGCTGCAGCACAGCGGGCCAGACCAGCAGAGGGACTTTCAGCGGGAGATTCAGATCCTCAAAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000458235.7
ENST00000527670.5
ENST00000534444.1
CDS-3UTR CAA 90 bp GGTGTTCCTGAAGTAGAGGACCCTCATAAGGCCTCTGAGGCCCAGAGAGGGGCATCCACGCTGCCAAAGTaGCCCTTGCCCAGCTGTGAG +
Preference number: 5 (lower is better)
Translates to: GVPEVEDPHKASEAQRGASTLPK*PLPSCE
Trigger: CTCACAGCTGGGCAAGGGCAACTTTGGCAGCGTGGA...TGCCCCTCTCTGGGCCTCAGAGGCCTTATGAGGGTCCTCTACTTCAGGAACACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS GCA 90 bp ATGGTGCTGTCTCCAGCCATGCACACGCCGTGGAGCAGCACGAGATaGCGGTACGACACTTGGCTCATCAAGCTCGCTGCTTCCAGGAAT +
Preference number: 5 (lower is better)
Translates to: MVLSPAMHTPWSSTR*RYDTWLIKLAASRN
Trigger: ATTCCTGGAAGCAGCGAGCTTGATGAGCCAAGTGTCGTACCGGCATCTCGTGCTGCTCCACGGCGTGTGCATGGCTGGAGACAGCACCAT
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000458235.7
ENST00000527670.5
ENST00000534444.1
CDS GCA 90 bp CTCTCACTGTCTCCAGCCATGCACACGCCGTGGAGCAGCACGAGATaGCGGTACGACACTTGGCTCATCAAGCTCGCTGCTTCCAGGAAT +
Preference number: 5 (lower is better)
Translates to: LSLSPAMHTPWSSTR*RYDTWLIKLAASRN
Trigger: ATTCCTGGAAGCAGCGAGCTTGATGAGCCAAGTGTCGTACCGGCATCTCGTGCTGCTCCACGGCGTGTGCATGGCTGGAGACAGTGAGAG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527031.5
CDS CCA 90 bp GCCATGCACACGCCGTGGAGCAGCACGAGATGCCGGTACGACACTTaGCTCATCAAGCTCGCTGCTTCCAGGAATGACTCCATGCAGTTC +
Preference number: 5 (lower is better)
Translates to: AMHTPWSSTRCRYDT*LIKLAASRNDSMQF
Trigger: GAACTGCATGGAGTCATTCCTGGAAGCAGCGAGCTTGATGAGCCAAGTGTCGTACCGGCATCTCGTGCTGCTCCACGGCGTGTGCATGGC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000458235.7
ENST00000527031.5
ENST00000527670.5
ENST00000534444.1
CDS-3UTR CAA 90 bp TCAGGGGGCCAGGGCTTAAGGGGTTGGGAAGATGCGAGAGTCTTAAATTTGGTTAGGATGCCGCTGGCCTaGGCAGCCTGCACGCACAGG +
Preference number: 5 (lower is better)
Translates to: SGGQGLRGWEDARVLNLVRMPLA*AACTHR
Trigger: CCTGTGCGTGCAGGCTGCCAAGGCCAGCGGCATCCT...AACCAAATTTAAGACTCTCGCATCTTCCCAACCCCTTAAGCCCTGGCCCCCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR CAA 90 bp TGGGGGCCAGGATCCTCATCGGCCTCACACTCTAGCCTTTCTTCTCAGTACAGAGCACTGGCCAAATCCTaGCGTAGCCCGAAGCGGTGG +
Preference number: 5 (lower is better)
Translates to: WGPGSSSASHSSLSSQYRALAKS*RSPKRW
Trigger: CCACCGCTTCGGGCTACGCAAGGATTTGGCCAGTGC...TCTGTACTGAGAAGAAAGGCTAGAGTGTGAGGCCGATGAGGATCCTGGCCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS TCA 90 bp GTCAAAGTCCTGGGGGCTGCGGCGGAGAACATAGGAGCCAGGACGTaGGCCCCCAGTCTTGAGCTTGTTGATGGCAAAGTCCAGAGTGAT +
Preference number: 5 (lower is better)
Translates to: VKVLGAAAENIGART*APSLELVDGKVQSD
Trigger: ATCACTCTGGACTTTGCCATCAACAAGCTCAAGACTGGGGGCTCACGTCCTGGCTCCTATGTTCTCCGCCGCAGCCCCCAGGACTTTGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000458235.7
ENST00000526008.5
ENST00000527031.5
ENST00000527670.5
ENST00000528705.1
ENST00000534444.1
CDS TCA 90 bp GCTATGAAAAGGACAGGGAGTGGTGTTTGCCCTCTGGGTGAGCAGTaGAGGCATGAGTCTCACACCCCCGGCTTCCGCTCCACAGCATGT +
Preference number: 5 (lower is better)
Translates to: AMKRTGSGVCPLGEQ*RHESHTPGFRSTAC
Trigger: ACATGCTGTGGAGCGGAAGCCGGGGGTGTGAGACTCATGCCTTCACTGCTCACCCAGAGGGCAAACACCACTCCCTGTCCTTTTCATAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS CCA 90 bp AGGGTAATGAACACGGCTCCCATCCAGGGTGGCCCAGTGTGTTGCTaGGGCTGTCATATAGCGGCTCAGAACAGAGGTGGGAAGAACAGC +
Preference number: 5 (lower is better)
Translates to: RVMNTAPIQGGPVCC*GCHIAAQNRGGKNS
Trigger: GCTGTTCTTCCCACCTCTGTTCTGAGCCGCTATATGACAGCCCCAGCAACACACTGGGCCACCCTGGATGGGAGCCGTGTTCATTACCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527031.5
CDS-3UTR CAA 90 bp CTTTGGGCCAGGACTCAGAGAGCCCCACTGACACATATGCCCATCTGTCTTGAAGCACTGGCCAAATCCTaGCGTAGCCCGAAGCGGTGG +
Preference number: 5 (lower is better)
Translates to: LWARTQRAPLTHMPICLEALAKS*RSPKRW
Trigger: CCACCGCTTCGGGCTACGCAAGGATTTGGCCAGTGC...TTCAAGACAGATGGGCATATGTGTCAGTGGGGCTCTCTGAGTCCTGGCCCAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR CAA 90 bp TCAGGGGGCCAGGGCTTAAGGGGTTGGGAAGATGCGAGAGTCTTAAATTTGGTTTCAGGTCGCGCAGGCTaGGGGGTAGGCAGGCCTTGT +
Preference number: 5 (lower is better)
Translates to: SGGQGLRGWEDARVLNLVSGRAG*GVGRPC
Trigger: ACAAGGCCTGCCTACCCCCAAGCCTGCGCGACCTGA...AACCAAATTTAAGACTCTCGCATCTTCCCAACCCCTTAAGCCCTGGCCCCCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR CAA 90 bp GGTGTTCCTGAAGTAGAGGACCCTCATAAGGCCTCTGAGGCCCAGAGAGGGGCACGTGAGCCCCCAGTCTaGAGCTTGTTGATGGCAAAG +
Preference number: 5 (lower is better)
Translates to: GVPEVEDPHKASEAQRGAREPPV*SLLMAK
Trigger: CTTTGCCATCAACAAGCTCAAGACTGGGGGCTCACG...TGCCCCTCTCTGGGCCTCAGAGGCCTTATGAGGGTCCTCTACTTCAGGAACACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR CAA 90 bp CCTGAAGTAGAGGACCCTCATAAGGCCTCTGAGGCCCAGAGAGGGGCAGCTCCGAGGTTGGACTTTTCTTaGGGTCTGGGGATACAGCAG +
Preference number: 5 (lower is better)
Translates to: PEVEDPHKASEAQRGAAPRLDFS*GLGIQQ
Trigger: CTGCTGTATCCCCAGACCCAAAGAAAAGTCCAACCT...CGGAGCTGCCCCTCTCTGGGCCTCAGAGGCCTTATGAGGGTCCTCTACTTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR CAA 90 bp GGTGTTCCTGAAGTAGAGGACCCTCATAAGGCCTCTGAGGCCCAGAGAGGGGCAATAGGCCATGCACTGTaGAATCAGCAGGGCCAGCTC +
Preference number: 5 (lower is better)
Translates to: GVPEVEDPHKASEAQRGAIGHAL*NQQGQL
Trigger: GAGCTGGCCCTGCTGATTCAACAGTGCATGGCCTAT...TGCCCCTCTCTGGGCCTCAGAGGCCTTATGAGGGTCCTCTACTTCAGGAACACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR CAA 90 bp GGTGTTCCTGAAGTAGAGGACCCTCATAAGGCCTCTGAGGCCCAGAGAGGGGCATGGTTCCTTGCTTCTTaGGGCCAGGACTCAGAGAGC +
Preference number: 5 (lower is better)
Translates to: GVPEVEDPHKASEAQRGAWFLAS*GQDSES
Trigger: GCTCTCTGAGTCCTGGCCCAAAGAAGCAAGGAACCA...TGCCCCTCTCTGGGCCTCAGAGGCCTTATGAGGGTCCTCTACTTCAGGAACACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS TCA 90 bp GCTCCACGCTGCCAAAGTTGCCCTTGCCCAGCTGTGAGATGTACTTaGGGTGTCTCTCCTCGAAGATCGTGGGGTCTTGGCAGGCATAGA +
Preference number: 5 (lower is better)
Translates to: APRCQSCPCPAVRCT*GVSPRRSWGLGRHR
Trigger: TCTATGCCTGCCAAGACCCCACGATCTTCGAGGAGAGACACCTCAAGTACATCTCACAGCTGGGCAAGGGCAACTTTGGCAGCGTGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000458235.7
ENST00000527670.5
ENST00000534444.1
CDS CCA 90 bp AGCTGGCTGGCACCAGGTGGCCACGTTTTCGCAGATACATGTCTATaGCCCCCAGGTGTACAAATTCCTGCACCATGGTGCTGTCTCCAG +
Preference number: 5 (lower is better)
Translates to: SWLAPGGHVFADTCL*PPGVQIPAPWCCLQ
Trigger: CTGGAGACAGCACCATGGTGCAGGAATTTGTACACCTGGGGGCCATAGACATGTATCTGCGAAAACGTGGCCACCTGGTGCCAGCCAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000458235.7
ENST00000527670.5
ENST00000534444.1
CDS-3UTR CAA 90 bp TTGCGTGAAAAGTTCCTGCCAGGTTTGGTGTCATCCCTTTGTGCCCCTTGTAGGGGCGGTGCCACCTCCTaGCAGAAGAAGTGCTGGGAG +
Preference number: 5 (lower is better)
Translates to: LREKFLPGLVSSLCAPCRGGATS*QKKCWE
Trigger: CTCCCAGCACTTCTTCTGCAAGGAGGTGGCACCGCC...CCTACAAGGGGCACAAAGGGATGACACCAAACCTGGCAGGAACTTTTCACGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000458235.7
CDS-3UTR CAA 90 bp TCAGGGGGCCAGGGCTTAAGGGGTTGGGAAGATGCGAGAGTCTTAAATTTGGTTGGCGGTGCCACCTCCTaGCAGAAGAAGTGCTGGGAG +
Preference number: 5 (lower is better)
Translates to: SGGQGLRGWEDARVLNLVGGATS*QKKCWE
Trigger: CTCCCAGCACTTCTTCTGCAAGGAGGTGGCACCGCC...AACCAAATTTAAGACTCTCGCATCTTCCCAACCCCTTAAGCCCTGGCCCCCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR CAA 90 bp CTTTGGGCCAGGACTCAGAGAGCCCCACTGACACATATGCCCATCTGTCTTGAAGAAGATCGTGGGGTCTaGGCAGGCATAGAGCTGGGC +
Preference number: 5 (lower is better)
Translates to: LWARTQRAPLTHMPICLEEDRGV*AGIELG
Trigger: GCCCAGCTCTATGCCTGCCAAGACCCCACGATCTTC...TTCAAGACAGATGGGCATATGTGTCAGTGGGGCTCTCTGAGTCCTGGCCCAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR CAA 90 bp CTCAGGGGGCCAGGGCTTAAGGGGTTGGGAAGATGCGAGAGTCTTAAATTTGGTTCCACGCTGCCAAAGTaGCCCTTGCCCAGCTGTGAG +
Preference number: 5 (lower is better)
Translates to: LRGPGLKGLGRCESLKFGSTLPK*PLPSCE
Trigger: CTCACAGCTGGGCAAGGGCAACTTTGGCAGCGTGGA...ACCAAATTTAAGACTCTCGCATCTTCCCAACCCCTTAAGCCCTGGCCCCCTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR CAA 90 bp CTTTGGGCCAGGACTCAGAGAGCCCCACTGACACATATGCCCATCTGTCTTGAACCGAAGTCAGCGATCTaGACGTGTGCCTCGCTCTCC +
Preference number: 5 (lower is better)
Translates to: LWARTQRAPLTHMPICLEPKSAI*TCASLS
Trigger: GGAGAGCGAGGCACACGTCAAGATCGCTGACTTCGG...TTCAAGACAGATGGGCATATGTGTCAGTGGGGCTCTCTGAGTCCTGGCCCAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS TCA 90 bp GCCAGTCAACAGAGACCTAATCCAGAGGTCTGCGGGCAGGAGCTATaGAAAGGACAGGGAGTGGTGTTTGCCCTCTGGGTGAGCAGTGAA +
Preference number: 5 (lower is better)
Translates to: ASQQRPNPEVCGQEL*KGQGVVFALWVSSE
Trigger: TTCACTGCTCACCCAGAGGGCAAACACCACTCCCTGTCCTTTTCATAGCTCCTGCCCGCAGACCTCTGGATTAGGTCTCTGTTGACTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR CAA 90 bp TTGCGTGAAAAGTTCCTGCCAGGTTTGGTGTCATCCCTTTGTGCCCCTTGTAGGCCTGTACAGCAGGACTaGGGTGCTGGCATCCTCCAC +
Preference number: 5 (lower is better)
Translates to: LREKFLPGLVSSLCAPCRPVQQD*GAGILH
Trigger: GTGGAGGATGCCAGCACCCAAGTCCTGCTGTACAGG...CCTACAAGGGGCACAAAGGGATGACACCAAACCTGGCAGGAACTTTTCACGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458235.7
CDS-3UTR CAA 90 bp CTCAGGGGGCCAGGGCTTAAGGGGTTGGGAAGATGCGAGAGTCTTAAATTTGGTAGGTCCATGATGTACTaGGCCATGAGCGAGTGCCGG +
Preference number: 5 (lower is better)
Translates to: LRGPGLKGLGRCESLKFGRSMMY*AMSECR
Trigger: CCGGCACTCGCTCATGGCCAAGTACATCATGGACCT...ACCAAATTTAAGACTCTCGCATCTTCCCAACCCCTTAAGCCCTGGCCCCCTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR CAA 90 bp TGGGGGCCAGGATCCTCATCGGCCTCACACTCTAGCCTTTCTTCTCAGTACAGAACGCGCGGGGCCTGCTaGATGCTAATGTCTACGATT +
Preference number: 5 (lower is better)
Translates to: WGPGSSSASHSSLSSQYRTRGAC*MLMSTI
Trigger: AATCGTAGACATTAGCATCAAGCAGGCCCCGCGCGT...TCTGTACTGAGAAGAAAGGCTAGAGTGTGAGGCCGATGAGGATCCTGGCCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS-3UTR CAA 90 bp CTCAGGGGGCCAGGGCTTAAGGGGTTGGGAAGATGCGAGAGTCTTAAATTTGGTATGCCGGTACGACACTaGGCTCATCAAGCTCGCTGC +
Preference number: 5 (lower is better)
Translates to: LRGPGLKGLGRCESLKFGMPVRH*AHQARC
Trigger: GCAGCGAGCTTGATGAGCCAAGTGTCGTACCGGCAT...ACCAAATTTAAGACTCTCGCATCTTCCCAACCCCTTAAGCCCTGGCCCCCTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR CAA 90 bp TCAGGGGGCCAGGGCTTAAGGGGTTGGGAAGATGCGAGAGTCTTAAATTTGGTTGAAGATCGTGGGGTCTaGGCAGGCATAGAGCTGGGC +
Preference number: 5 (lower is better)
Translates to: SGGQGLRGWEDARVLNLVEDRGV*AGIELG
Trigger: GCCCAGCTCTATGCCTGCCAAGACCCCACGATCTTC...AACCAAATTTAAGACTCTCGCATCTTCCCAACCCCTTAAGCCCTGGCCCCCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR CAA 90 bp CTCAGGGGGCCAGGGCTTAAGGGGTTGGGAAGATGCGAGAGTCTTAAATTTGGTTGGCGAGAGAAGATGTaGTCCGAGAGGGATTCGGGG +
Preference number: 5 (lower is better)
Translates to: LRGPGLKGLGRCESLKFGWREKM*SERDSG
Trigger: CCCCGAATCCCTCTCGGACAACATCTTCTCTCGCCA...ACCAAATTTAAGACTCTCGCATCTTCCCAACCCCTTAAGCCCTGGCCCCCTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR CAA 90 bp CCCAGAGAGGGAAAGGAACTTGCCCACTGTCACACTGCATGGAAGGGGCAAAACTGGTTCCTTGCTTCTTaGGGCCAGGACTCAGAGAGC +
Preference number: 5 (lower is better)
Translates to: PREGKELAHCHTAWKGQNWFLAS*GQDSES
Trigger: GCTCTCTGAGTCCTGGCCCAAAGAAGCAAGGAACCA...GTTTTGCCCCTTCCATGCAGTGTGACAGTGGGCAAGTTCCTTTCCCTCTCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458235.7
CDS-3UTR CAA 90 bp CCTGAAGTAGAGGACCCTCATAAGGCCTCTGAGGCCCAGAGAGGGGCAGCTCCGGCGAGAGTCTTAAATTaGGTTCCTTGCTTCTTTGGG +
Preference number: 5 (lower is better)
Translates to: PEVEDPHKASEAQRGAAPARVLN*VPCFFG
Trigger: CCCAAAGAAGCAAGGAACCAAATTTAAGACTCTCGC...CGGAGCTGCCCCTCTCTGGGCCTCAGAGGCCTTATGAGGGTCCTCTACTTCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS TCA 90 bp TGTCATCTGACTCAGCTGGTATTGGGATTGGGGCTGAACCAAGGATaGTGTGGGTGGGCTGTGACCTCTCTGGACCACGATCAGGTTGGA +
Preference number: 5 (lower is better)
Translates to: CHLTQLVLGLGLNQG*CGWAVTSLDHDQVG
Trigger: TCCAACCTGATCGTGGTCCAGAGAGGTCACAGCCCACCCACATCATCCTTGGTTCAGCCCCAATCCCAATACCAGCTGAGTCAGATGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000458235.7
ENST00000526008.5
ENST00000527031.5
ENST00000527670.5
ENST00000534444.1
CDS TCA 90 bp TCACCCAGAGGAAGAGCTGAGAGCTGGAGAGAGACTAGGTGCAGATaGCATGGCTCACATCTAGCTGTGCCTTTGGGTCTGGGGATACAG +
Preference number: 5 (lower is better)
Translates to: SPRGRAESWRETRCR*HGSHLAVPLGLGIQ
Trigger: CTGTATCCCCAGACCCAAAGGCACAGCTAGATGTGAGCCATGTCATCTGCACCTAGTCTCTCTCCAGCTCTCAGCTCTTCCTCTGGGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526008.5
CDS-3UTR CAA 90 bp TATGAGGGAAGGCTGCAAGGATGTGGTAGCTGGAGTTTTGAGAGATGGATAAGATCAGGTCGCGCAGGCTaGGGGGTAGGCAGGCCTTGT +
Preference number: 5 (lower is better)
Translates to: YEGRLQGCGSWSFERWIRSGRAG*GVGRPC
Trigger: ACAAGGCCTGCCTACCCCCAAGCCTGCGCGACCTGA...TCTTATCCATCTCTCAAAACTCCAGCTACCACATCCTTGCAGCCTTCCCTCATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458235.7
CDS-3UTR CAA 90 bp TTGCGTGAAAAGTTCCTGCCAGGTTTGGTGTCATCCCTTTGTGCCCCTTGTAGGAGGTCCATGATGTACTaGGCCATGAGCGAGTGCCGG +
Preference number: 5 (lower is better)
Translates to: LREKFLPGLVSSLCAPCRRSMMY*AMSECR
Trigger: CCGGCACTCGCTCATGGCCAAGTACATCATGGACCT...CCTACAAGGGGCACAAAGGGATGACACCAAACCTGGCAGGAACTTTTCACGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458235.7
CDS-3UTR CAA 90 bp AGGGAAAGGAACTTGCCCACTGTCACACTGCATGGAAGGGGCAAAACTGTAGGCACGCGCGGGGCCTGCTaGATGCTAATGTCTACGATT +
Preference number: 5 (lower is better)
Translates to: RERNLPTVTLHGRGKTVGTRGAC*MLMSTI
Trigger: AATCGTAGACATTAGCATCAAGCAGGCCCCGCGCGT...GCCTACAGTTTTGCCCCTTCCATGCAGTGTGACAGTGGGCAAGTTCCTTTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000458235.7
CDS-3UTR CAA 90 bp CTTTGGGCCAGGACTCAGAGAGCCCCACTGACACATATGCCCATCTGTCTTGAAACGCGCGGGGCCTGCTaGATGCTAATGTCTACGATT +
Preference number: 5 (lower is better)
Translates to: LWARTQRAPLTHMPICLETRGAC*MLMSTI
Trigger: AATCGTAGACATTAGCATCAAGCAGGCCCCGCGCGT...TTCAAGACAGATGGGCATATGTGTCAGTGGGGCTCTCTGAGTCCTGGCCCAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR CAA 90 bp TCAGGGGGCCAGGGCTTAAGGGGTTGGGAAGATGCGAGAGTCTTAAATTTGGTTGCGCCGAAGCCCCACTaGTCAGCTTCCAAGCTAAGT +
Preference number: 5 (lower is better)
Translates to: SGGQGLRGWEDARVLNLVAPKPH*SASKLS
Trigger: ACTTAGCTTGGAAGCTGACAAGTGGGGCTTCGGCGC...AACCAAATTTAAGACTCTCGCATCTTCCCAACCCCTTAAGCCCTGGCCCCCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR CAA 90 bp TCAGGGGGCCAGGGCTTAAGGGGTTGGGAAGATGCGAGAGTCTTAAATTTGGTTTGGCGAGAGAAGATGTaGTCCGAGAGGGATTCGGGG +
Preference number: 5 (lower is better)
Translates to: SGGQGLRGWEDARVLNLVWREKM*SERDSG
Trigger: CCCCGAATCCCTCTCGGACAACATCTTCTCTCGCCA...AACCAAATTTAAGACTCTCGCATCTTCCCAACCCCTTAAGCCCTGGCCCCCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR CAA 90 bp CTTTGGGCCAGGACTCAGAGAGCCCCACTGACACATATGCCCATCTGTCTTGAATCACCAGTCAGAAAGTaGACCCTGCACAGCCAAGGG +
Preference number: 5 (lower is better)
Translates to: LWARTQRAPLTHMPICLESPVRK*TLHSQG
Trigger: CCCTTGGCTGTGCAGGGTCAACTTTCTGACTGGTGA...TTCAAGACAGATGGGCATATGTGTCAGTGGGGCTCTCTGAGTCCTGGCCCAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458235.7
CDS-3UTR CAA 90 bp CTTTGGGCCAGGACTCAGAGAGCCCCACTGACACATATGCCCATCTGTCTTGAAAGTGGCAGAAAAGCTTaGCAGGTGAGGAGGAGCAGC +
Preference number: 5 (lower is better)
Translates to: LWARTQRAPLTHMPICLESGRKA*QVRRSS
Trigger: GCTGCTCCTCCTCACCTGCAAAGCTTTTCTGCCACT...TTCAAGACAGATGGGCATATGTGTCAGTGGGGCTCTCTGAGTCCTGGCCCAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458235.7
CDS CCA 90 bp TCTGACTCAGCTGGTATTGGGATTGGGGCTGAACCAAGGATGATGTaGGTGGGCTGTGACCTCTCTGGACCACGATCAGGTTGGACTTTT +
Preference number: 5 (lower is better)
Translates to: SDSAGIGIGAEPRMM*VGCDLSGPRSGWTF
Trigger: AAAAGTCCAACCTGATCGTGGTCCAGAGAGGTCACAGCCCACCCACATCATCCTTGGTTCAGCCCCAATCCCAATACCAGCTGAGTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000458235.7
ENST00000526008.5
ENST00000527031.5
ENST00000527670.5
ENST00000534444.1
CDS-3UTR CAA 90 bp GGTTGGGAAGATGCGAGAGTCTTAAATTTGGTTCCTTGCTTCTTTGGGCCAGGACCTGTACAGCAGGACTaGGGTGCTGGCATCCTCCAC +
Preference number: 5 (lower is better)
Translates to: GWEDARVLNLVPCFFGPGPVQQD*GAGILH
Trigger: GTGGAGGATGCCAGCACCCAAGTCCTGCTGTACAGG...TCCTGGCCCAAAGAAGCAAGGAACCAAATTTAAGACTCTCGCATCTTCCCAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR CAA 90 bp CTTTGGGCCAGGACTCAGAGAGCCCCACTGACACATATGCCCATCTGTCTTGAACCCCCAGTCTTGAGCTaGTTGATGGCAAAGTCCAGA +
Preference number: 5 (lower is better)
Translates to: LWARTQRAPLTHMPICLEPPVLS*LMAKSR
Trigger: TCTGGACTTTGCCATCAACAAGCTCAAGACTGGGGG...TTCAAGACAGATGGGCATATGTGTCAGTGGGGCTCTCTGAGTCCTGGCCCAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR CAA 90 bp TGGGGGCCAGGATCCTCATCGGCCTCACACTCTAGCCTTTCTTCTCAGTACAGAAGGTTGGACTTTTCTTaGGGTCTGGGGATACAGCAG +
Preference number: 5 (lower is better)
Translates to: WGPGSSSASHSSLSSQYRRLDFS*GLGIQQ
Trigger: CTGCTGTATCCCCAGACCCAAAGAAAAGTCCAACCT...TCTGTACTGAGAAGAAAGGCTAGAGTGTGAGGCCGATGAGGATCCTGGCCCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS-3UTR CAA 90 bp CCCAGAGAGGGAAAGGAACTTGCCCACTGTCACACTGCATGGAAGGGGCAAAACATGCAGTTCTTGTGCTaGGCATCCATGACCTTCAGC +
Preference number: 5 (lower is better)
Translates to: PREGKELAHCHTAWKGQNMQFLC*ASMTFS
Trigger: GCTGAAGGTCATGGATGCCAAGCACAAGAACTGCAT...GTTTTGCCCCTTCCATGCAGTGTGACAGTGGGCAAGTTCCTTTCCCTCTCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458235.7
CDS-3UTR CAA 90 bp GGTGTTCCTGAAGTAGAGGACCCTCATAAGGCCTCTGAGGCCCAGAGAGGGGCACCGGTCCTCATAAAATaGGAGTTTCTTAGCAGGATC +
Preference number: 5 (lower is better)
Translates to: GVPEVEDPHKASEAQRGAPVLIK*EFLSRI
Trigger: GATCCTGCTAAGAAACTCCAATTTTATGAGGACCGG...TGCCCCTCTCTGGGCCTCAGAGGCCTTATGAGGGTCCTCTACTTCAGGAACACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR CAA 90 bp GTGTTCAGGAGTCTAATCTTCCCTCACCCTATAAGGCATTACTATTCTCATTTTCAGGCGCCAGCTGGCTaGCCCGAGACCCCGGCCCAA +
Preference number: 5 (lower is better)
Translates to: VFRSLIFPHPIRHYYSHFQAPAG*PETPAQ
Trigger: TTGGGCCGGGGTCTCGGGCAAGCCAGCTGGCGCCTG...AAAATGAGAATAGTAATGCCTTATAGGGTGAGGGAAGATTAGACTCCTGAACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS CCA 90 bp GCTGCAGAGATTAGAAAGCCAGGTTTGTCTGACTTCAGGTCATTCTaGGGCTGGATATGGGTGAGAACCTGGAGCCGCTTTCCAAGGAGT +
Preference number: 5 (lower is better)
Translates to: AAEIRKPGLSDFRSF*GWIWVRTWSRFPRS
Trigger: ACTCCTTGGAAAGCGGCTCCAGGTTCTCACCCATATCCAGCCCCAGAATGACCTGAAGTCAGACAAACCTGGCTTTCTAATCTCTGCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527031.5
CDS CCA 90 bp AGGATGATGTGGGTGGGCTGTGACCTCTCTGGACCACGATCAGGTTaGACTTTTATCTCAGAATTGTCCCATCAGAGGGGTTTGTCCAGG +
Preference number: 5 (lower is better)
Translates to: RMMWVGCDLSGPRSG*TFISELSHQRGLSR
Trigger: CCTGGACAAACCCCTCTGATGGGACAATTCTGAGATAAAAGTCCAACCTGATCGTGGTCCAGAGAGGTCACAGCCCACCCACATCATCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526008.5
CDS-3UTR CAA 90 bp CTTTGGGCCAGGACTCAGAGAGCCCCACTGACACATATGCCCATCTGTCTTGAACCAGTCTTGAGCTTGTaGATGGCAAAGTCCAGAGTG +
Preference number: 5 (lower is better)
Translates to: LWARTQRAPLTHMPICLEPVLSL*MAKSRV
Trigger: CACTCTGGACTTTGCCATCAACAAGCTCAAGACTGG...TTCAAGACAGATGGGCATATGTGTCAGTGGGGCTCTCTGAGTCCTGGCCCAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR CAA 90 bp CTCAGGGGGCCAGGGCTTAAGGGGTTGGGAAGATGCGAGAGTCTTAAATTTGGTTGGACCACGATCAGGTaGGACTTTTCTTTGGGTCTG +
Preference number: 5 (lower is better)
Translates to: LRGPGLKGLGRCESLKFGWTTIR*DFSLGL
Trigger: CAGACCCAAAGAAAAGTCCAACCTGATCGTGGTCCA...ACCAAATTTAAGACTCTCGCATCTTCCCAACCCCTTAAGCCCTGGCCCCCTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR CAA 90 bp CTCAGGGGGCCAGGGCTTAAGGGGTTGGGAAGATGCGAGAGTCTTAAATTTGGTATGCAGTTCTTGTGCTaGGCATCCATGACCTTCAGC +
Preference number: 5 (lower is better)
Translates to: LRGPGLKGLGRCESLKFGMQFLC*ASMTFS
Trigger: GCTGAAGGTCATGGATGCCAAGCACAAGAACTGCAT...ACCAAATTTAAGACTCTCGCATCTTCCCAACCCCTTAAGCCCTGGCCCCCTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR CAA 90 bp CCAGGGCTTAAGGGGTTGGGAAGATGCGAGAGTCTTAAATTTGGTTCCTTGCTTGCGCCGAAGCCCCACTaGTCAGCTTCCAAGCTAAGT +
Preference number: 5 (lower is better)
Translates to: PGLKGLGRCESLKFGSLLAPKPH*SASKLS
Trigger: ACTTAGCTTGGAAGCTGACAAGTGGGGCTTCGGCGC...AAGCAAGGAACCAAATTTAAGACTCTCGCATCTTCCCAACCCCTTAAGCCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR CAA 90 bp CCAGTCAGAAAGTTGACCCTGCACAGCCAAGGGGTAAGCTCTGACCATTTTGCAAAGTTCCTGCCAGGTTaGGTGTCATCCCTTTGTGCC +
Preference number: 5 (lower is better)
Translates to: PVRKLTLHSQGVSSDHFAKFLPG*VSSLCA
Trigger: GGCACAAAGGGATGACACCAAACCTGGCAGGAACTT...TGCAAAATGGTCAGAGCTTACCCCTTGGCTGTGCAGGGTCAACTTTCTGACTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458235.7
CDS-3UTR CAA 90 bp CAGGAGTCTAATCTTCCCTCACCCTATAAGGCATTACTATTCTCATTTTGGAAAAGGATGCCGCTGGCCTaGGCAGCCTGCACGCACAGG +
Preference number: 5 (lower is better)
Translates to: QESNLPSPYKALLFSFWKRMPLA*AACTHR
Trigger: CCTGTGCGTGCAGGCTGCCAAGGCCAGCGGCATCCT...TTTCCAAAATGAGAATAGTAATGCCTTATAGGGTGAGGGAAGATTAGACTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS-3UTR CAA 90 bp CTTTGGGCCAGGACTCAGAGAGCCCCACTGACACATATGCCCATCTGTCTTGAAGCCTCTAAAATCTGGTaGTCTGTCCTGGTAACAGTG +
Preference number: 5 (lower is better)
Translates to: LWARTQRAPLTHMPICLEASKIW*SVLVTV
Trigger: CACTGTTACCAGGACAGACAACCAGATTTTAGAGGC...TTCAAGACAGATGGGCATATGTGTCAGTGGGGCTCTCTGAGTCCTGGCCCAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR CAA 90 bp GGTTGGGAAGATGCGAGAGTCTTAAATTTGGTTCCTTGCTTCTTTGGGCCAGGACGTGAGCCCCCAGTCTaGAGCTTGTTGATGGCAAAG +
Preference number: 5 (lower is better)
Translates to: GWEDARVLNLVPCFFGPGREPPV*SLLMAK
Trigger: CTTTGCCATCAACAAGCTCAAGACTGGGGGCTCACG...TCCTGGCCCAAAGAAGCAAGGAACCAAATTTAAGACTCTCGCATCTTCCCAACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR CAA 90 bp TGGGGGCCAGGATCCTCATCGGCCTCACACTCTAGCCTTTCTTCTCAGTACAGACCGGTCCTCATAAAATaGGAGTTTCTTAGCAGGATC +
Preference number: 5 (lower is better)
Translates to: WGPGSSSASHSSLSSQYRPVLIK*EFLSRI
Trigger: GATCCTGCTAAGAAACTCCAATTTTATGAGGACCGG...TCTGTACTGAGAAGAAAGGCTAGAGTGTGAGGCCGATGAGGATCCTGGCCCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS-3UTR CAA 90 bp GGTTGGGAAGATGCGAGAGTCTTAAATTTGGTTCCTTGCTTCTTTGGGCCAGGAATAGGCCATGCACTGTaGAATCAGCAGGGCCAGCTC +
Preference number: 5 (lower is better)
Translates to: GWEDARVLNLVPCFFGPGIGHAL*NQQGQL
Trigger: GAGCTGGCCCTGCTGATTCAACAGTGCATGGCCTAT...TCCTGGCCCAAAGAAGCAAGGAACCAAATTTAAGACTCTCGCATCTTCCCAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR CAA 90 bp ATAGGCACAGGTGTTCAGGAGTCTAATCTTCCCTCACCCTATAAGGCATTACTACCGAAGTCAGCGATCTaGACGTGTGCCTCGCTCTCC +
Preference number: 5 (lower is better)
Translates to: IGTGVQESNLPSPYKALLPKSAI*TCASLS
Trigger: GGAGAGCGAGGCACACGTCAAGATCGCTGACTTCGG...TAGTAATGCCTTATAGGGTGAGGGAAGATTAGACTCCTGAACACCTGTGCCTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS-3UTR CAA 90 bp GGTGTTCCTGAAGTAGAGGACCCTCATAAGGCCTCTGAGGCCCAGAGAGGGGCATTGAACCTTAACAAATaGCAAAGGCCACAGGCTATT +
Preference number: 5 (lower is better)
Translates to: GVPEVEDPHKASEAQRGALNLNK*QRPQAI
Trigger: AATAGCCTGTGGCCTTTGCAATTTGTTAAGGTTCAA...TGCCCCTCTCTGGGCCTCAGAGGCCTTATGAGGGTCCTCTACTTCAGGAACACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS CCA 90 bp GAGATTAGAAAGCCAGGTTTGTCTGACTTCAGGTCATTCTGGGGCTaGATATGGGTGAGAACCTGGAGCCGCTTTCCAAGGAGTGATGAT +
Preference number: 5 (lower is better)
Translates to: EIRKPGLSDFRSFWG*IWVRTWSRFPRSDD
Trigger: ATCATCACTCCTTGGAAAGCGGCTCCAGGTTCTCACCCATATCCAGCCCCAGAATGACCTGAAGTCAGACAAACCTGGCTTTCTAATCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527031.5
CDS-3UTR CAA 90 bp CAGGAGTCTAATCTTCCCTCACCCTATAAGGCATTACTATTCTCATTTTGGAAATCAGGTCGCGCAGGCTaGGGGGTAGGCAGGCCTTGT +
Preference number: 5 (lower is better)
Translates to: QESNLPSPYKALLFSFWKSGRAG*GVGRPC
Trigger: ACAAGGCCTGCCTACCCCCAAGCCTGCGCGACCTGA...TTTCCAAAATGAGAATAGTAATGCCTTATAGGGTGAGGGAAGATTAGACTCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS-3UTR CAA 90 bp AATACTTGGGCTCTTAACCTCCTTACTCTGAGCCTTCTCACGCTTGGCATGCTGCCAGTCTTGAGCTTGTaGATGGCAAAGTCCAGAGTG +
Preference number: 5 (lower is better)
Translates to: NTWALNLLTLSLLTLGMLPVLSL*MAKSRV
Trigger: CACTCTGGACTTTGCCATCAACAAGCTCAAGACTGG...CAGCATGCCAAGCGTGAGAAGGCTCAGAGTAAGGAGGTTAAGAGCCCAAGTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458235.7
CDS-3UTR CAA 90 bp CTCATAGGCACAGGTGTTCAGGAGTCTAATCTTCCCTCACCCTATAAGGCATTAATAGGCCATGCACTGTaGAATCAGCAGGGCCAGCTC +
Preference number: 5 (lower is better)
Translates to: LIGTGVQESNLPSPYKALIGHAL*NQQGQL
Trigger: GAGCTGGCCCTGCTGATTCAACAGTGCATGGCCTAT...TAATGCCTTATAGGGTGAGGGAAGATTAGACTCCTGAACACCTGTGCCTATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS-3UTR CAA 90 bp ATAGGCACAGGTGTTCAGGAGTCTAATCTTCCCTCACCCTATAAGGCATTACTATGGCGAGAGAAGATGTaGTCCGAGAGGGATTCGGGG +
Preference number: 5 (lower is better)
Translates to: IGTGVQESNLPSPYKALLWREKM*SERDSG
Trigger: CCCCGAATCCCTCTCGGACAACATCTTCTCTCGCCA...TAGTAATGCCTTATAGGGTGAGGGAAGATTAGACTCCTGAACACCTGTGCCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS-3UTR CAA 90 bp AGGGAAAGGAACTTGCCCACTGTCACACTGCATGGAAGGGGCAAAACTGTAGGCGCGAGAGTCTTAAATTaGGTTCCTTGCTTCTTTGGG +
Preference number: 5 (lower is better)
Translates to: RERNLPTVTLHGRGKTVGARVLN*VPCFFG
Trigger: CCCAAAGAAGCAAGGAACCAAATTTAAGACTCTCGC...GCCTACAGTTTTGCCCCTTCCATGCAGTGTGACAGTGGGCAAGTTCCTTTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458235.7
CDS-3UTR CAA 90 bp TATGAGGGAAGGCTGCAAGGATGTGGTAGCTGGAGTTTTGAGAGATGGATAAGACCACAGCAACTGCTCTaGTCCTTGGCTTCCTCCAGA +
Preference number: 5 (lower is better)
Translates to: YEGRLQGCGSWSFERWIRPQQLL*SLASSR
Trigger: TCTGGAGGAAGCCAAGGACAAGAGCAGTTGCTGTGG...TCTTATCCATCTCTCAAAACTCCAGCTACCACATCCTTGCAGCCTTCCCTCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458235.7
CDS TCA 90 bp GACTTTTATCTCAGAATTGTCCCATCAGAGGGGTTTGTCCAGGAGTaGAATTCACCCAGAGGAAGAGCTGAGAGCTGGAGAGAGACTAGG +
Preference number: 5 (lower is better)
Translates to: DFYLRIVPSEGFVQE*NSPRGRAESWRETR
Trigger: CCTAGTCTCTCTCCAGCTCTCAGCTCTTCCTCTGGGTGAATTTCACTCCTGGACAAACCCCTCTGATGGGACAATTCTGAGATAAAAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526008.5
CDS-3UTR CAA 90 bp CAGGAGTCTAATCTTCCCTCACCCTATAAGGCATTACTATTCTCATTTTGGAAAGGCGGTGCCACCTCCTaGCAGAAGAAGTGCTGGGAG +
Preference number: 5 (lower is better)
Translates to: QESNLPSPYKALLFSFWKGGATS*QKKCWE
Trigger: CTCCCAGCACTTCTTCTGCAAGGAGGTGGCACCGCC...TTTCCAAAATGAGAATAGTAATGCCTTATAGGGTGAGGGAAGATTAGACTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS-3UTR CAA 90 bp TATGAGGGAAGGCTGCAAGGATGTGGTAGCTGGAGTTTTGAGAGATGGATAAGACCCCCAGTCTTGAGCTaGTTGATGGCAAAGTCCAGA +
Preference number: 5 (lower is better)
Translates to: YEGRLQGCGSWSFERWIRPPVLS*LMAKSR
Trigger: TCTGGACTTTGCCATCAACAAGCTCAAGACTGGGGG...TCTTATCCATCTCTCAAAACTCCAGCTACCACATCCTTGCAGCCTTCCCTCATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458235.7
CDS-3UTR CAA 90 bp CCAGGGCTTAAGGGGTTGGGAAGATGCGAGAGTCTTAAATTTGGTTCCTTGCTTAGGTTGGACTTTTCTTaGGGTCTGGGGATACAGCAG +
Preference number: 5 (lower is better)
Translates to: PGLKGLGRCESLKFGSLLRLDFS*GLGIQQ
Trigger: CTGCTGTATCCCCAGACCCAAAGAAAAGTCCAACCT...AAGCAAGGAACCAAATTTAAGACTCTCGCATCTTCCCAACCCCTTAAGCCCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR CAA 90 bp CCAGTCAGAAAGTTGACCCTGCACAGCCAAGGGGTAAGCTCTGACCATTTTGCACTGACACCACGATACTaGACAATGAAATCACTGTGC +
Preference number: 5 (lower is better)
Translates to: PVRKLTLHSQGVSSDHFALTPRY*TMKSLC
Trigger: GCACAGTGATTTCATTGTCAAGTATCGTGGTGTCAG...TGCAAAATGGTCAGAGCTTACCCCTTGGCTGTGCAGGGTCAACTTTCTGACTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458235.7
CDS-3UTR CAA 90 bp CATGGAAGGGGCAAAACTGTAGGCTCCAATACTTGGGCTCTTAACCTCCTTACTCAACTGCTCTTGTCCTaGGCTTCCTCCAGAGAAACA +
Preference number: 5 (lower is better)
Translates to: HGRGKTVGSNTWALNLLTQLLLS*ASSRET
Trigger: TGTTTCTCTGGAGGAAGCCAAGGACAAGAGCAGTTG...AGTAAGGAGGTTAAGAGCCCAAGTATTGGAGCCTACAGTTTTGCCCCTTCCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458235.7
CDS-3UTR CAA 90 bp CATGGAAGGGGCAAAACTGTAGGCTCCAATACTTGGGCTCTTAACCTCCTTACTGCCTCTAAAATCTGGTaGTCTGTCCTGGTAACAGTG +
Preference number: 5 (lower is better)
Translates to: HGRGKTVGSNTWALNLLTASKIW*SVLVTV
Trigger: CACTGTTACCAGGACAGACAACCAGATTTTAGAGGC...AGTAAGGAGGTTAAGAGCCCAAGTATTGGAGCCTACAGTTTTGCCCCTTCCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000458235.7
CDS-3UTR CAA 90 bp CTCATAGGCACAGGTGTTCAGGAGTCTAATCTTCCCTCACCCTATAAGGCATTATGGACCACGATCAGGTaGGACTTTTCTTTGGGTCTG +
Preference number: 5 (lower is better)
Translates to: LIGTGVQESNLPSPYKALWTTIR*DFSLGL
Trigger: CAGACCCAAAGAAAAGTCCAACCTGATCGTGGTCCA...TAATGCCTTATAGGGTGAGGGAAGATTAGACTCCTGAACACCTGTGCCTATGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS-3UTR CAA 90 bp CAGGAGTCTAATCTTCCCTCACCCTATAAGGCATTACTATTCTCATTTTGGAAAGAAGATCGTGGGGTCTaGGCAGGCATAGAGCTGGGC +
Preference number: 5 (lower is better)
Translates to: QESNLPSPYKALLFSFWKEDRGV*AGIELG
Trigger: GCCCAGCTCTATGCCTGCCAAGACCCCACGATCTTC...TTTCCAAAATGAGAATAGTAATGCCTTATAGGGTGAGGGAAGATTAGACTCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS-3UTR CAA 90 bp CTCAGGGGGCCAGGGCTTAAGGGGTTGGGAAGATGCGAGAGTCTTAAATTTGGTTTGAACCTTAACAAATaGCAAAGGCCACAGGCTATT +
Preference number: 5 (lower is better)
Translates to: LRGPGLKGLGRCESLKFGLNLNK*QRPQAI
Trigger: AATAGCCTGTGGCCTTTGCAATTTGTTAAGGTTCAA...ACCAAATTTAAGACTCTCGCATCTTCCCAACCCCTTAAGCCCTGGCCCCCTGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR CAA 90 bp GTGTTCAGGAGTCTAATCTTCCCTCACCCTATAAGGCATTACTATTCTCATTTTAGGTCCATGATGTACTaGGCCATGAGCGAGTGCCGG +
Preference number: 5 (lower is better)
Translates to: VFRSLIFPHPIRHYYSHFRSMMY*AMSECR
Trigger: CCGGCACTCGCTCATGGCCAAGTACATCATGGACCT...AAAATGAGAATAGTAATGCCTTATAGGGTGAGGGAAGATTAGACTCCTGAACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS-3UTR CAA 90 bp ATAGGCACAGGTGTTCAGGAGTCTAATCTTCCCTCACCCTATAAGGCATTACTACCAGTCTTGAGCTTGTaGATGGCAAAGTCCAGAGTG +
Preference number: 5 (lower is better)
Translates to: IGTGVQESNLPSPYKALLPVLSL*MAKSRV
Trigger: CACTCTGGACTTTGCCATCAACAAGCTCAAGACTGG...TAGTAATGCCTTATAGGGTGAGGGAAGATTAGACTCCTGAACACCTGTGCCTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS-3UTR CAA 90 bp CATGGAAGGGGCAAAACTGTAGGCTCCAATACTTGGGCTCTTAACCTCCTTACTCCGGTCCTCATAAAATaGGAGTTTCTTAGCAGGATC +
Preference number: 5 (lower is better)
Translates to: HGRGKTVGSNTWALNLLTPVLIK*EFLSRI
Trigger: GATCCTGCTAAGAAACTCCAATTTTATGAGGACCGG...AGTAAGGAGGTTAAGAGCCCAAGTATTGGAGCCTACAGTTTTGCCCCTTCCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000458235.7
CDS-3UTR CAA 90 bp AATCTTCCCTCACCCTATAAGGCATTACTATTCTCATTTTGGAAAAGGGTAAACTCCACGCTGCCAAAGTaGCCCTTGCCCAGCTGTGAG +
Preference number: 5 (lower is better)
Translates to: NLPSPYKALLFSFWKRVNSTLPK*PLPSCE
Trigger: CTCACAGCTGGGCAAGGGCAACTTTGGCAGCGTGGA...GTTTACCCTTTTCCAAAATGAGAATAGTAATGCCTTATAGGGTGAGGGAAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS-3UTR CAA 90 bp CCAGGGCTTAAGGGGTTGGGAAGATGCGAGAGTCTTAAATTTGGTTCCTTGCTTCTGACACCACGATACTaGACAATGAAATCACTGTGC +
Preference number: 5 (lower is better)
Translates to: PGLKGLGRCESLKFGSLLLTPRY*TMKSLC
Trigger: GCACAGTGATTTCATTGTCAAGTATCGTGGTGTCAG...AAGCAAGGAACCAAATTTAAGACTCTCGCATCTTCCCAACCCCTTAAGCCCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR CAA 90 bp GGTTGGGAAGATGCGAGAGTCTTAAATTTGGTTCCTTGCTTCTTTGGGCCAGGACTTAAATTTGGTTCCTaGCTTCTTTGGGCCAGGACT +
Preference number: 5 (lower is better)
Translates to: GWEDARVLNLVPCFFGPGLKFGS*LLWART
Trigger: AGTCCTGGCCCAAAGAAGCAAGGAACCAAATTTAAG...TCCTGGCCCAAAGAAGCAAGGAACCAAATTTAAGACTCTCGCATCTTCCCAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR CAA 90 bp TCTAATCTTCCCTCACCCTATAAGGCATTACTATTCTCATTTTGGAAAAGGGTAATGCCGGTACGACACTaGGCTCATCAAGCTCGCTGC +
Preference number: 5 (lower is better)
Translates to: SNLPSPYKALLFSFWKRVMPVRH*AHQARC
Trigger: GCAGCGAGCTTGATGAGCCAAGTGTCGTACCGGCAT...TACCCTTTTCCAAAATGAGAATAGTAATGCCTTATAGGGTGAGGGAAGATTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS-3UTR CAA 90 bp AATCTTCCCTCACCCTATAAGGCATTACTATTCTCATTTTGGAAAAGGGTAAACGCGCCGAAGCCCCACTaGTCAGCTTCCAAGCTAAGT +
Preference number: 5 (lower is better)
Translates to: NLPSPYKALLFSFWKRVNAPKPH*SASKLS
Trigger: ACTTAGCTTGGAAGCTGACAAGTGGGGCTTCGGCGC...GTTTACCCTTTTCCAAAATGAGAATAGTAATGCCTTATAGGGTGAGGGAAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS-3UTR CAA 90 bp CTCATAGGCACAGGTGTTCAGGAGTCTAATCTTCCCTCACCCTATAAGGCATTACTGACACCACGATACTaGACAATGAAATCACTGTGC +
Preference number: 5 (lower is better)
Translates to: LIGTGVQESNLPSPYKALLTPRY*TMKSLC
Trigger: GCACAGTGATTTCATTGTCAAGTATCGTGGTGTCAG...TAATGCCTTATAGGGTGAGGGAAGATTAGACTCCTGAACACCTGTGCCTATGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS-3UTR CAA 90 bp TCAGGGGGCCAGGGCTTAAGGGGTTGGGAAGATGCGAGAGTCTTAAATTTGGTTATATGCCCATCTGTCTaGAACCTTAACAAATTGCAA +
Preference number: 5 (lower is better)
Translates to: SGGQGLRGWEDARVLNLVICPSV*NLNKLQ
Trigger: TTGCAATTTGTTAAGGTTCAAGACAGATGGGCATAT...AACCAAATTTAAGACTCTCGCATCTTCCCAACCCCTTAAGCCCTGGCCCCCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS-3UTR CAA 90 bp GTGTTCAGGAGTCTAATCTTCCCTCACCCTATAAGGCATTACTATTCTCATTTTCCCCCAGTCTTGAGCTaGTTGATGGCAAAGTCCAGA +
Preference number: 5 (lower is better)
Translates to: VFRSLIFPHPIRHYYSHFPPVLS*LMAKSR
Trigger: TCTGGACTTTGCCATCAACAAGCTCAAGACTGGGGG...AAAATGAGAATAGTAATGCCTTATAGGGTGAGGGAAGATTAGACTCCTGAACAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS-3UTR CAA 90 bp TCTAATCTTCCCTCACCCTATAAGGCATTACTATTCTCATTTTGGAAAAGGGTACGTGAGCCCCCAGTCTaGAGCTTGTTGATGGCAAAG +
Preference number: 5 (lower is better)
Translates to: SNLPSPYKALLFSFWKRVREPPV*SLLMAK
Trigger: CTTTGCCATCAACAAGCTCAAGACTGGGGGCTCACG...TACCCTTTTCCAAAATGAGAATAGTAATGCCTTATAGGGTGAGGGAAGATTAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS-3UTR CAA 90 bp AATACTTGGGCTCTTAACCTCCTTACTCTGAGCCTTCTCACGCTTGGCATGCTGATATGCCCATCTGTCTaGAACCTTAACAAATTGCAA +
Preference number: 5 (lower is better)
Translates to: NTWALNLLTLSLLTLGMLICPSV*NLNKLQ
Trigger: TTGCAATTTGTTAAGGTTCAAGACAGATGGGCATAT...CAGCATGCCAAGCGTGAGAAGGCTCAGAGTAAGGAGGTTAAGAGCCCAAGTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458235.7
CDS-3UTR CAA 90 bp GTGTTCAGGAGTCTAATCTTCCCTCACCCTATAAGGCATTACTATTCTCATTTTATGCAGTTCTTGTGCTaGGCATCCATGACCTTCAGC +
Preference number: 5 (lower is better)
Translates to: VFRSLIFPHPIRHYYSHFMQFLC*ASMTFS
Trigger: GCTGAAGGTCATGGATGCCAAGCACAAGAACTGCAT...AAAATGAGAATAGTAATGCCTTATAGGGTGAGGGAAGATTAGACTCCTGAACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS-3UTR CAA 90 bp TCTAATCTTCCCTCACCCTATAAGGCATTACTATTCTCATTTTGGAAAAGGGTAGCCTCTAAAATCTGGTaGTCTGTCCTGGTAACAGTG +
Preference number: 5 (lower is better)
Translates to: SNLPSPYKALLFSFWKRVASKIW*SVLVTV
Trigger: CACTGTTACCAGGACAGACAACCAGATTTTAGAGGC...TACCCTTTTCCAAAATGAGAATAGTAATGCCTTATAGGGTGAGGGAAGATTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS CCA 72 bp CCGTCGTGGCCACCAAGGGCCCCAGGGAGGCCCACGTaGAAGGTCTCGGCGGCCCCGGCTGGATCCAGCCGC +
Preference number: 6 (lower is better)
Translates to: PSWPPRAPGRPT*KVSAAPAGSSR
Trigger: GCGGCTGGATCCAGCCGGGGCCGCCGAGACCTTCCACGTGGGCCTCCCTGGGGCCCTTGGTGGCCACGACGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000458235.7
ENST00000526008.5
ENST00000527031.5
ENST00000527670.5
ENST00000528705.1
ENST00000534444.1
CDS GCA 72 bp GGTCTGCCTGGCAGGCGGCCACGCGGCGCAGGGCTCTaGGCACCGTCCTCCGAATACGCCTCCGCGTCACGA +
Preference number: 6 (lower is better)
Translates to: GLPGRRPRGAGL*APSSEYASASR
Trigger: TCGTGACGCGGAGGCGTATTCGGAGGACGGTGCGCAGAGCCCTGCGCCGCGTGGCCGCCTGCCAGGCAGACC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000458235.7
ENST00000526008.5
ENST00000527031.5
ENST00000527670.5
ENST00000528293.1
ENST00000534444.1
CDS GCA 72 bp CGCTCCAGGTCCATGATGTACTTGGCCATGAGCGAGTaGCGGTCTGCCTGGCAGGCGGCCACGCGGCGCAGG +
Preference number: 6 (lower is better)
Translates to: RSRSMMYLAMSE*RSAWQAATRRR
Trigger: CCTGCGCCGCGTGGCCGCCTGCCAGGCAGACCGGCACTCGCTCATGGCCAAGTACATCATGGACCTGGAGCG
69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000458235.7
ENST00000526008.5
ENST00000527031.5
ENST00000527670.5
ENST00000528293.1
ENST00000528705.1
ENST00000534444.1
CDS GCA 72 bp GGTGGGAGCCCGGCAAAGCCCCGATGGAGCCCACGTTaGTCACTCCCAAGCAGAGGCCGTCCCCACAGCCTG +
Preference number: 6 (lower is better)
Translates to: GGSPAKPRWSPR*SLPSRGRPHSL
Trigger: CAGGCTGTGGGGACGGCCTCTGCTTGGGAGTGAGCAACGTGGGCTCCATCGGGGCTTTGCCGGGCTCCCACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528293.1
CDS CCA 72 bp ATGATGTACTTGGCCATGAGCGAGTGCCGGTCTGCCTaGCAGGCGGCCACGCGGCGCAGGGCTCTGCGCACC +
Preference number: 6 (lower is better)
Translates to: MMYLAMSECRSA*QAATRRRALRT
Trigger: GGTGCGCAGAGCCCTGCGCCGCGTGGCCGCCTGCCAGGCAGACCGGCACTCGCTCATGGCCAAGTACATCAT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000458235.7
ENST00000526008.5
ENST00000527031.5
ENST00000527670.5
ENST00000528293.1
ENST00000534444.1
CDS CAA 90 bp CGGGCCAGGTCCAACACGGCCAGGCTGAGACACTCACCCTGCTCCTaGAGACTGAGGCCCACGGGGAGGCGCCCACTCACCAGGTCACTG +
Preference number: 6 (lower is better)
Translates to: RARSNTARLRHSPCS*RLRPTGRRPLTRSL
Trigger: CAGTGACCTGGTGAGTGGGCGCCTCCCCGTGGGCCTCAGTCTCAAGGAGCAGGGTGAGTGTCTCAGCCTGGCCGTGTTGGACCTGGCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000458235.7
ENST00000526008.5
ENST00000527031.5
ENST00000527670.5
ENST00000528293.1
ENST00000534444.1
CDS GCA 72 bp GCCAGGTCCAACACGGCCAGGCTGAGACACTCACCCTaGTCCTTGAGACTGAGGCCCACGGGGAGGCGCCCA +
Preference number: 6 (lower is better)
Translates to: ARSNTARLRHSP*SLRLRPTGRRP
Trigger: TGGGCGCCTCCCCGTGGGCCTCAGTCTCAAGGAGCAGGGTGAGTGTCTCAGCCTGGCCGTGTTGGACCTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000458235.7
ENST00000526008.5
ENST00000527031.5
ENST00000527670.5
ENST00000528293.1
ENST00000534444.1
CDS CCA 72 bp CTCCGAATACGCCTCCGCGTCACGAAGCTCAGGCCCTaGATCAGGTCGCGCAGGCTTGGGGGTAGGCAGGCC +
Preference number: 6 (lower is better)
Translates to: LRIRLRVTKLRP*IRSRRLGGRQA
Trigger: GGCCTGCCTACCCCCAAGCCTGCGCGACCTGATCCAGGGCCTGAGCTTCGTGACGCGGAGGCGTATTCGGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000458235.7
ENST00000526008.5
ENST00000527031.5
ENST00000527670.5
ENST00000528293.1
ENST00000534444.1
CDS CAA 72 bp TGGTGGGAGCCCGGCAAAGCCCCGATGGAGCCCACGTaGCTCACTCCCAAGCAGAGGCCGTCCCCACAGCCT +
Preference number: 6 (lower is better)
Translates to: WWEPGKAPMEPT*LTPKQRPSPQP
Trigger: AGGCTGTGGGGACGGCCTCTGCTTGGGAGTGAGCAACGTGGGCTCCATCGGGGCTTTGCCGGGCTCCCACCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528293.1
CDS GCA 72 bp ATCTGGTTGTCTGTCCTGGTAACAGTGACCAGGCGGTaGTCTCCGGCCGGGCCAACGCGCGGGGCCTGCTTG +
Preference number: 6 (lower is better)
Translates to: IWLSVLVTVTRR*SPAGPTRGACL
Trigger: CAAGCAGGCCCCGCGCGTTGGCCCGGCCGGAGAGCACCGCCTGGTCACTGTTACCAGGACAGACAACCAGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000458235.7
ENST00000526008.5
ENST00000527031.5
ENST00000527670.5
ENST00000528705.1
ENST00000534444.1
CDS CCA 72 bp TGCCATGAGTGCAACTTGCCTAGCGGGCAGGGACCCTaGACTTTCGAAGGGCGGGCAGAGCCGGGAGGCAGC +
Preference number: 6 (lower is better)
Translates to: CHECNLPSGQGP*TFEGRAEPGGS
Trigger: GCTGCCTCCCGGCTCTGCCCGCCCTTCGAAAGTCCAGGGTCCCTGCCCGCTAGGCAAGTTGCACTCATGGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526008.5
ENST00000528293.1
ENST00000534444.1
CDS CAA 90 bp GGCTCGGAAGGAGGGCCTCTGGACCGGCTCATAGGCCATGCACTGTaGAATCAGCAGGGCCAGCTCTGTCCACTTGGGGGCCGGCAGCTG +
Preference number: 6 (lower is better)
Translates to: GSEGGPLDRLIGHAL*NQQGQLCPLGGRQL
Trigger: CAGCTGCCGGCCCCCAAGTGGACAGAGCTGGCCCTGCTGATTCAACAGTGCATGGCCTATGAGCCGGTCCAGAGGCCCTCCTTCCGAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000458235.7
ENST00000527670.5
ENST00000534444.1
CDS CAA 90 bp AGAACTCCATGGTGGGAGCCCGGCAAAGCCCCGATGGAGCCCACGTaGCTCACTCCCAAGCAGAGGCCGTCCCCACAGCCTGGTGGCTCT +
Preference number: 6 (lower is better)
Translates to: RTPWWEPGKAPMEPT*LTPKQRPSPQPGGS
Trigger: AGAGCCACCAGGCTGTGGGGACGGCCTCTGCTTGGGAGTGAGCAACGTGGGCTCCATCGGGGCTTTGCCGGGCTCCCACCATGGAGTTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528293.1
CDS CCA 72 bp CAGGACAGGTCCTCCGTGGCCAGAGCAAAGAGGGAGTaGTACACAGGCAGGATGCCGCTGGCCTTGGCAGCC +
Preference number: 6 (lower is better)
Translates to: QDRSSVARAKRE*YTGRMPLALAA
Trigger: GGCTGCCAAGGCCAGCGGCATCCTGCCTGTGTACCACTCCCTCTTTGCTCTGGCCACGGAGGACCTGTCCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000458235.7
ENST00000526008.5
ENST00000527031.5
ENST00000527670.5
ENST00000534444.1
CDS CCA 72 bp CCTTGCAGATCTGCGAGGAATAGAGAAGGAGGCGGCTaGCATCGAGGCGCGCGCGGTGCCGCTGCAGGAAGT +
Preference number: 6 (lower is better)
Translates to: PCRSARNREGGG*HRGARGAAAGS
Trigger: ACTTCCTGCAGCGGCACCGCGCGCGCCTCGATGCCAGCCGCCTCCTTCTCTATTCCTCGCAGATCTGCAAGG
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000458235.7
ENST00000527670.5
ENST00000534444.1
CDS CCA 72 bp GCTCACTCCCAAGCAGAGGCCGTCCCCACAGCCTGGTaGCTCTCACCTGACAGTCTTCAGCAGCTCTCCCGG +
Preference number: 6 (lower is better)
Translates to: AHSQAEAVPTAW*LSPDSLQQLSR
Trigger: CCGGGAGAGCTGCTGAAGACTGTCAGGTGAGAGCCACCAGGCTGTGGGGACGGCCTCTGCTTGGGAGTGAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528293.1
CDS CCA 72 bp GGAGAACTCCATGGTGGGAGCCCGGCAAAGCCCCGATaGAGCCCACGTTGCTCACTCCCAAGCAGAGGCCGT +
Preference number: 6 (lower is better)
Translates to: GELHGGSPAKPR*SPRCSLPSRGR
Trigger: ACGGCCTCTGCTTGGGAGTGAGCAACGTGGGCTCCATCGGGGCTTTGCCGGGCTCCCACCATGGAGTTCTCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528293.1
CDS CAA 72 bp GGAGGGCCTCTGGACCGGCTCATAGGCCATGCACTGTaGAATCAGCAGGGCCAGCTCTGTCCACTTGGGGGC +
Preference number: 6 (lower is better)
Translates to: GGPLDRLIGHAL*NQQGQLCPLGG
Trigger: GCCCCCAAGTGGACAGAGCTGGCCCTGCTGATTCAACAGTGCATGGCCTATGAGCCGGTCCAGAGGCCCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000458235.7
ENST00000527670.5
ENST00000534444.1
CDS CAA 90 bp GTGACCAGGCGGTGCTCTCCGGCCGGGCCAACGCGCGGGGCCTGCTaGATGCTAATGTCTACGATTTCTGGAAAGTCGCAGAAGGGCTGG +
Preference number: 6 (lower is better)
Translates to: VTRRCSPAGPTRGAC*MLMSTISGKSQKGW
Trigger: CCAGCCCTTCTGCGACTTTCCAGAAATCGTAGACATTAGCATCAAGCAGGCCCCGCGCGTTGGCCCGGCCGGAGAGCACCGCCTGGTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000458235.7
ENST00000526008.5
ENST00000527031.5
ENST00000527670.5
ENST00000528705.1
ENST00000534444.1
CDS TCA 72 bp GCACCAGCCTCCGTGGACAAGAGGCTGCATGAACGCTaGGGGATCAGGGGCGTCTCTTCACTTGGAGGTGCC +
Preference number: 6 (lower is better)
Translates to: APASVDKRLHER*GIRGVSSLGGA
Trigger: GGCACCTCCAAGTGAAGAGACGCCCCTGATCCCTCAGCGTTCATGCAGCCTCTTGTCCACGGAGGCTGGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000458235.7
ENST00000526008.5
ENST00000527031.5
ENST00000527670.5
ENST00000528293.1
ENST00000534444.1
CDS TCA 72 bp TTGCCAGGAGCTCTCGAAGACTGCTGTGGGGTCGGCTaGGGCCAACCAGAAGGAAGGTTCCTGTGGGGCTGC +
Preference number: 6 (lower is better)
Translates to: LPGALEDCCGVG*GQPEGRFLWGC
Trigger: GCAGCCCCACAGGAACCTTCCTTCTGGTTGGCCTCAGCCGACCCCACAGCAGTCTTCGAGAGCTCCTGGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000458235.7
ENST00000526008.5
ENST00000527031.5
ENST00000527670.5
ENST00000528705.1
ENST00000534444.1
CDS TCA 72 bp AGGACAGGGAGTGGTGTTTGCCCTCTGGGTGAGCAGTaGAGGCATGAGTCTCACACCCCCGGCTTCCGCTCC +
Preference number: 6 (lower is better)
Translates to: RTGSGVCPLGEQ*RHESHTPGFRS
Trigger: GGAGCGGAAGCCGGGGGTGTGAGACTCATGCCTTCACTGCTCACCCAGAGGGCAAACACCACTCCCTGTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS GCA 72 bp ACGCTGAGGGATCAGGGGCGTCTCTTCACTTGGAGGTaGCATGAGTGCAACTTGCCTAGCGGGCAGGGACCC +
Preference number: 6 (lower is better)
Translates to: TLRDQGRLFTWR*HECNLPSGQGP
Trigger: GGGTCCCTGCCCGCTAGGCAAGTTGCACTCATGGCACCTCCAAGTGAAGAGACGCCCCTGATCCCTCAGCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000458235.7
ENST00000526008.5
ENST00000528293.1
ENST00000534444.1
CDS GCA 72 bp GCACATGCAGGGCACCAGCCTCCGTGGACAAGAGGCTaGATGAACGCTGAGGGATCAGGGGCGTCTCTTCAC +
Preference number: 6 (lower is better)
Translates to: AHAGHQPPWTRG*MNAEGSGASLH
Trigger: GTGAAGAGACGCCCCTGATCCCTCAGCGTTCATGCAGCCTCTTGTCCACGGAGGCTGGTGCCCTGCATGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000458235.7
ENST00000526008.5
ENST00000527031.5
ENST00000527670.5
ENST00000528293.1
ENST00000534444.1
CDS GCA 72 bp AGGCGGTGCTCTCCGGCCGGGCCAACGCGCGGGGCCTaGTTGATGCTAATGTCTACGATTTCTGGAAAGTCG +
Preference number: 6 (lower is better)
Translates to: RRCSPAGPTRGA*LMLMSTISGKS
Trigger: CGACTTTCCAGAAATCGTAGACATTAGCATCAAGCAGGCCCCGCGCGTTGGCCCGGCCGGAGAGCACCGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000458235.7
ENST00000526008.5
ENST00000527031.5
ENST00000527670.5
ENST00000528705.1
ENST00000534444.1
CDS CCA 72 bp TGCACCATGGTGCTGTCTCCAGCCATGCACACGCCGTaGAGCAGCACGAGATGCCGGTACGACACTTGGCTC +
Preference number: 6 (lower is better)
Translates to: CTMVLSPAMHTP*SSTRCRYDTWL
Trigger: GAGCCAAGTGTCGTACCGGCATCTCGTGCTGCTCCACGGCGTGTGCATGGCTGGAGACAGCACCATGGTGCA
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000458235.7
ENST00000527670.5
ENST00000534444.1
CDS CCA 72 bp GTTGCTCACTCCCAAGCAGAGGCCGTCCCCACAGCCTaGTGGCTCTCACCTGACAGTCTTCAGCAGCTCTCC +
Preference number: 6 (lower is better)
Translates to: VAHSQAEAVPTA*WLSPDSLQQLS
Trigger: GGAGAGCTGCTGAAGACTGTCAGGTGAGAGCCACCAGGCTGTGGGGACGGCCTCTGCTTGGGAGTGAGCAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528293.1
CDS CAA 72 bp CGGTGCTCTCCGGCCGGGCCAACGCGCGGGGCCTGCTaGATGCTAATGTCTACGATTTCTGGAAAGTCGCAG +
Preference number: 6 (lower is better)
Translates to: RCSPAGPTRGAC*MLMSTISGKSQ
Trigger: CTGCGACTTTCCAGAAATCGTAGACATTAGCATCAAGCAGGCCCCGCGCGTTGGCCCGGCCGGAGAGCACCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000458235.7
ENST00000526008.5
ENST00000527031.5
ENST00000527670.5
ENST00000528705.1
ENST00000534444.1
CDS TCA 72 bp ATGCAGGGCACCAGCCTCCGTGGACAAGAGGCTGCATaGACGCTGAGGGATCAGGGGCGTCTCTTCACTTGG +
Preference number: 6 (lower is better)
Translates to: MQGTSLRGQEAA*TLRDQGRLFTW
Trigger: CCAAGTGAAGAGACGCCCCTGATCCCTCAGCGTTCATGCAGCCTCTTGTCCACGGAGGCTGGTGCCCTGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000458235.7
ENST00000526008.5
ENST00000527031.5
ENST00000527670.5
ENST00000528293.1
ENST00000534444.1
CDS TCA 72 bp CTGGGGGCTGCGGCGGAGAACATAGGAGCCAGGACGTaGGCCCCCAGTCTTGAGCTTGTTGATGGCAAAGTC +
Preference number: 6 (lower is better)
Translates to: LGAAAENIGART*APSLELVDGKV
Trigger: GACTTTGCCATCAACAAGCTCAAGACTGGGGGCTCACGTCCTGGCTCCTATGTTCTCCGCCGCAGCCCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000458235.7
ENST00000526008.5
ENST00000527031.5
ENST00000527670.5
ENST00000528705.1
ENST00000534444.1
CDS TCA 72 bp TGGGTTCGTGGGAGGCCCTGGGTCATAGGAACACCCTaGAAGCTTGCAGGAGAACTCCATGGTGGGAGCCCG +
Preference number: 6 (lower is better)
Translates to: WVRGRPWVIGTP*KLAGELHGGSP
Trigger: CGGGCTCCCACCATGGAGTTCTCCTGCAAGCTTTCAGGGTGTTCCTATGACCCAGGGCCTCCCACGAACCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528293.1
CDS GCA 72 bp TCTCCAGCCATGCACACGCCGTGGAGCAGCACGAGATaGCGGTACGACACTTGGCTCATCAAGCTCGCTGCT +
Preference number: 6 (lower is better)
Translates to: SPAMHTPWSSTR*RYDTWLIKLAA
Trigger: AGCAGCGAGCTTGATGAGCCAAGTGTCGTACCGGCATCTCGTGCTGCTCCACGGCGTGTGCATGGCTGGAGA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000458235.7
ENST00000527031.5
ENST00000527670.5
ENST00000534444.1
CDS GCA 72 bp TCCCTCTGCCAGGAATGCCTCTCTGACCATCCACAGTaGTCCGTGCTGCCCTCCTCACACCTCATCACACCC +
Preference number: 6 (lower is better)
Translates to: SLCQECLSDHPQ*SVLPSSHLITP
Trigger: GGGTGTGATGAGGTGTGAGGAGGGCAGCACGGAGCACTGTGGATGGTCAGAGAGGCATTCCTGGCAGAGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527031.5
CDS GCA 72 bp TGGGAGGCCCTGGGTCATAGGAACACCCTGAAAGCTTaGAGGAGAACTCCATGGTGGGAGCCCGGCAAAGCC +
Preference number: 6 (lower is better)
Translates to: WEALGHRNTLKA*RRTPWWEPGKA
Trigger: GGCTTTGCCGGGCTCCCACCATGGAGTTCTCCTGCAAGCTTTCAGGGTGTTCCTATGACCCAGGGCCTCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528293.1
CDS CCA 72 bp TCCCAGCAGGTTGCCAGGAGCTCTCGAAGACTGCTGTaGGGTCGGCTGAGGCCAACCAGAAGGAAGGTTCCT +
Preference number: 6 (lower is better)
Translates to: SQQVARSSRRLL*GRLRPTRRKVP
Trigger: AGGAACCTTCCTTCTGGTTGGCCTCAGCCGACCCCACAGCAGTCTTCGAGAGCTCCTGGCAACCTGCTGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000458235.7
ENST00000526008.5
ENST00000527031.5
ENST00000527670.5
ENST00000528705.1
ENST00000534444.1
CDS CCA 72 bp GATCTGAATCTCCCGCTGAAAGTCCCTCTGCTGGTCTaGCCCGCTGTGCTGCAGCTGTTTCACGGCCACCAG +
Preference number: 6 (lower is better)
Translates to: DLNLPLKVPLLV*PAVLQLFHGHQ
Trigger: CTGGTGGCCGTGAAACAGCTGCAGCACAGCGGGCCAGACCAGCAGAGGGACTTTCAGCGGGAGATTCAGATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000458235.7
ENST00000527670.5
ENST00000534444.1
CDS CCA 72 bp AACACGGCTCCCATCCAGGGTGGCCCAGTGTGTTGCTaGGGCTGTCATATAGCGGCTCAGAACAGAGGTGGG +
Preference number: 6 (lower is better)
Translates to: NTAPIQGGPVCC*GCHIAAQNRGG
Trigger: CCCACCTCTGTTCTGAGCCGCTATATGACAGCCCCAGCAACACACTGGGCCACCCTGGATGGGAGCCGTGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527031.5
CDS CCA 72 bp GCCCGAAGCGGTGGCACTTCTCCAGCCCAAACCAATTaGGGAAGTAAAAGCGCTGGCCTTGGCAGCCTGCAC +
Preference number: 6 (lower is better)
Translates to: ARSGGTSPAQTN*GSKSAGLGSLH
Trigger: GTGCAGGCTGCCAAGGCCAGCGCTTTTACTTCCCCAATTGGTTTGGGCTGGAGAAGTGCCACCGCTTCGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528293.1
CDS CCA 72 bp AGGAACACCCTGAAAGCTTGCAGGAGAACTCCATGGTaGGAGCCCGGCAAAGCCCCGATGGAGCCCACGTTG +
Preference number: 6 (lower is better)
Translates to: RNTLKACRRTPW*EPGKAPMEPTL
Trigger: CAACGTGGGCTCCATCGGGGCTTTGCCGGGCTCCCACCATGGAGTTCTCCTGCAAGCTTTCAGGGTGTTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528293.1
CDS CCA 72 bp CATAGGAACACCCTGAAAGCTTGCAGGAGAACTCCATaGTGGGAGCCCGGCAAAGCCCCGATGGAGCCCACG +
Preference number: 6 (lower is better)
Translates to: HRNTLKACRRTP*WEPGKAPMEPT
Trigger: CGTGGGCTCCATCGGGGCTTTGCCGGGCTCCCACCATGGAGTTCTCCTGCAAGCTTTCAGGGTGTTCCTATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528293.1
CDS TCA 72 bp CCACCACCTCATGGCGACAGCCCCGGTAAATCTTGGTaGAGGACCCATGGCCCAGGTTCTCATGCCACTCCA +
Preference number: 6 (lower is better)
Translates to: PPPHGDSPGKSW*RTHGPGSHATP
Trigger: TGGAGTGGCATGAGAACCTGGGCCATGGGTCCTTCACCAAGATTTACCGGGGCTGTCGCCATGAGGTGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000458235.7
ENST00000527031.5
ENST00000527670.5
ENST00000534444.1
CDS GCA 72 bp TTCTCACGCTTGGCATGCTGTTCCCTCTGCCAGGAATaGCTCTCTGACCATCCACAGTGCTCCGTGCTGCCC +
Preference number: 6 (lower is better)
Translates to: FSRLACCSLCQE*LSDHPQCSVLP
Trigger: GGGCAGCACGGAGCACTGTGGATGGTCAGAGAGGCATTCCTGGCAGAGGGAACAGCATGCCAAGCGTGAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527031.5
CDS CCA 72 bp GTCACTGCGGTGCTGGGCAAAGAGGTGCTCCAGGACTaGCAGGTCAAGGATAGCACTGGCCAAATCCTTGCG +
Preference number: 6 (lower is better)
Translates to: VTAVLGKEVLQD*QVKDSTGQILA
Trigger: CGCAAGGATTTGGCCAGTGCTATCCTTGACCTGCCAGTCCTGGAGCACCTCTTTGCCCAGCACCGCAGTGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000458235.7
ENST00000526008.5
ENST00000527031.5
ENST00000527670.5
ENST00000528293.1
ENST00000534444.1
CDS CCA 72 bp ACGCCGTGGAGCAGCACGAGATGCCGGTACGACACTTaGCTCATCAAGCTCGCTGCTTCCAGGAATGACTCC +
Preference number: 6 (lower is better)
Translates to: TPWSSTRCRYDT*LIKLAASRNDS
Trigger: GGAGTCATTCCTGGAAGCAGCGAGCTTGATGAGCCAAGTGTCGTACCGGCATCTCGTGCTGCTCCACGGCGT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000458235.7
ENST00000527031.5
ENST00000527670.5
ENST00000534444.1
CDS CCA 72 bp TTGACCACCTGCAGCTTCCAGCTGGCTGGCACCAGGTaGCCACGTTTTCGCAGATACATGTCTATGGCCCCC +
Preference number: 6 (lower is better)
Translates to: LTTCSFQLAGTR*PRFRRYMSMAP
Trigger: GGGGGCCATAGACATGTATCTGCGAAAACGTGGCCACCTGGTGCCAGCCAGCTGGAAGCTGCAGGTGGTCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000458235.7
ENST00000527670.5
ENST00000534444.1
CDS CAA 72 bp AGGACTGGCAGGTCAAGGATAGCACTGGCCAAATCCTaGCGTAGCCCGAAGCGGTGGCACTTCTCCAGCCCA +
Preference number: 6 (lower is better)
Translates to: RTGRSRIALAKS*RSPKRWHFSSP
Trigger: TGGGCTGGAGAAGTGCCACCGCTTCGGGCTACGCAAGGATTTGGCCAGTGCTATCCTTGACCTGCCAGTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000458235.7
ENST00000526008.5
ENST00000527031.5
ENST00000527670.5
ENST00000528293.1
ENST00000534444.1
CDS CAA 72 bp AGCGGCAGCAGCTTAGCTAGGCCGAAGTCAGCGATCTaGACGTGTGCCTCGCTCTCCACGAGGATGTTTCGG +
Preference number: 6 (lower is better)
Translates to: SGSSLARPKSAI*TCASLSTRMFR
Trigger: CCGAAACATCCTCGTGGAGAGCGAGGCACACGTCAAGATCGCTGACTTCGGCCTAGCTAAGCTGCTGCCGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000458235.7
ENST00000527670.5
ENST00000534444.1
CDS CAA 90 bp AGGTGCTCCAGGACTGGCAGGTCAAGGATAGCACTGGCCAAATCCTaGCGTAGCCCGAAGCGGTGGCACTTCTCCAGCCCAAACCAATTG +
Preference number: 6 (lower is better)
Translates to: RCSRTGRSRIALAKS*RSPKRWHFSSPNQL
Trigger: CAATTGGTTTGGGCTGGAGAAGTGCCACCGCTTCGGGCTACGCAAGGATTTGGCCAGTGCTATCCTTGACCTGCCAGTCCTGGAGCACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000458235.7
ENST00000526008.5
ENST00000527031.5
ENST00000527670.5
ENST00000528293.1
ENST00000534444.1
CDS TCA 72 bp CAACCAGAAGGAAGGTTCCTGTGGGGCTGCGCCGGATaGGGCAGCCCTTATAATCAGGACCAAGGGGGTTCT +
Preference number: 6 (lower is better)
Translates to: QPEGRFLWGCAG*GSPYNQDQGGS
Trigger: AGAACCCCCTTGGTCCTGATTATAAGGGCTGCCTCATCCGGCGCAGCCCCACAGGAACCTTCCTTCTGGTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000458235.7
ENST00000526008.5
ENST00000527031.5
ENST00000527670.5
ENST00000528705.1
ENST00000534444.1
CDS GCA 72 bp ATGAACACGGCTCCCATCCAGGGTGGCCCAGTGTGTTaGTGGGGCTGTCATATAGCGGCTCAGAACAGAGGT +
Preference number: 6 (lower is better)
Translates to: MNTAPIQGGPVC*WGCHIAAQNRG
Trigger: ACCTCTGTTCTGAGCCGCTATATGACAGCCCCAGCAACACACTGGGCCACCCTGGATGGGAGCCGTGTTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527031.5
CDS GCA 72 bp TTCTTCTCAGTACAGAGACTCAGGCGCCAGCTGGCTTaGCCGAGACCCCGGCCCAATCTACAGACTGGGAAA +
Preference number: 6 (lower is better)
Translates to: FFSVQRLRRQLA*PRPRPNLQTGK
Trigger: TTTCCCAGTCTGTAGATTGGGCCGGGGTCTCGGGCAAGCCAGCTGGCGCCTGAGTCTCTGTACTGAGAAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS CCA 72 bp CAGCGAGAGGAAAGTCCCACTCGGCTCCTTCCTGTGTaGGCCCCTTGGTTTCCTGAGCCACTGTCATTTACC +
Preference number: 6 (lower is better)
Translates to: QREESPTRLLPV*APWFPEPLSFT
Trigger: GGTAAATGACAGTGGCTCAGGAAACCAAGGGGCCCACACAGGAAGGAGCCGAGTGGGACTTTCCTCTCGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528293.1
CDS CAA 72 bp AATGAACACGGCTCCCATCCAGGGTGGCCCAGTGTGTaGCTGGGGCTGTCATATAGCGGCTCAGAACAGAGG +
Preference number: 6 (lower is better)
Translates to: NEHGSHPGWPSV*LGLSYSGSEQR
Trigger: CCTCTGTTCTGAGCCGCTATATGACAGCCCCAGCAACACACTGGGCCACCCTGGATGGGAGCCGTGTTCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527031.5
CDS CAA 72 bp TTTCTTCTCAGTACAGAGACTCAGGCGCCAGCTGGCTaGCCCGAGACCCCGGCCCAATCTACAGACTGGGAA +
Preference number: 6 (lower is better)
Translates to: FLLSTETQAPAG*PETPAQSTDWE
Trigger: TTCCCAGTCTGTAGATTGGGCCGGGGTCTCGGGCAAGCCAGCTGGCGCCTGAGTCTCTGTACTGAGAAGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534444.1
CDS TCA 72 bp CAGAGACCTAATCCAGAGGTCTGCGGGCAGGAGCTATaGAAAGGACAGGGAGTGGTGTTTGCCCTCTGGGTG +
Preference number: 6 (lower is better)
Translates to: QRPNPEVCGQEL*KGQGVVFALWV
Trigger: CACCCAGAGGGCAAACACCACTCCCTGTCCTTTTCATAGCTCCTGCCCGCAGACCTCTGGATTAGGTCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458235.7
ENST00000527670.5
CDS CCA 72 bp GCGCGGGGCCTGCTTGATGCTAATGTCTACGATTTCTaGAAAGTCGCAGAAGGGCTGGAGGACCTCCTGTTC +
Preference number: 6 (lower is better)
Translates to: ARGLLDANVYDF*KVAEGLEDLLF
Trigger: GAACAGGAGGTCCTCCAGCCCTTCTGCGACTTTCCAGAAATCGTAGACATTAGCATCAAGCAGGCCCCGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000458235.7
ENST00000526008.5
ENST00000527031.5
ENST00000527670.5
ENST00000528705.1
ENST00000534444.1
CDS CCA 72 bp GCTGGTATTGGGATTGGGGCTGAACCAAGGATGATGTaGGTGGGCTGTGACCTCTCTGGACCACGATCAGGT +
Preference number: 6 (lower is better)
Translates to: AGIGIGAEPRMM*VGCDLSGPRSG
Trigger: ACCTGATCGTGGTCCAGAGAGGTCACAGCCCACCCACATCATCCTTGGTTCAGCCCCAATCCCAATACCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000458235.7
ENST00000526008.5
ENST00000527031.5
ENST00000527670.5
ENST00000534444.1
CDS TCA 72 bp TGCCAAAGTTGCCCTTGCCCAGCTGTGAGATGTACTTaGGGTGTCTCTCCTCGAAGATCGTGGGGTCTTGGC +
Preference number: 6 (lower is better)
Translates to: CQSCPCPAVRCT*GVSPRRSWGLG
Trigger: GCCAAGACCCCACGATCTTCGAGGAGAGACACCTCAAGTACATCTCACAGCTGGGCAAGGGCAACTTTGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000458235.7
ENST00000527670.5
ENST00000534444.1
CDS GCA 72 bp AGATACATGTCTATGGCCCCCAGGTGTACAAATTCCTaGACCATGGTGCTGTCTCCAGCCATGCACACGCCG +
Preference number: 6 (lower is better)
Translates to: RYMSMAPRCTNS*TMVLSPAMHTP
Trigger: CGGCGTGTGCATGGCTGGAGACAGCACCATGGTGCAGGAATTTGTACACCTGGGGGCCATAGACATGTATCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000458235.7
ENST00000527670.5
ENST00000534444.1
CDS CCA 72 bp GCACCAGGTGGCCACGTTTTCGCAGATACATGTCTATaGCCCCCAGGTGTACAAATTCCTGCACCATGGTGC +
Preference number: 6 (lower is better)
Translates to: APGGHVFADTCL*PPGVQIPAPWC
Trigger: GCACCATGGTGCAGGAATTTGTACACCTGGGGGCCATAGACATGTATCTGCGAAAACGTGGCCACCTGGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000458235.7
ENST00000527670.5
ENST00000534444.1
CDS CAA 72 bp CCGAAGCTCCAGACGTCTGACTGGCGAGAGAAGATGTaGTCCGAGAGGGATTCGGGGGCATACCAGAAAATG +
Preference number: 6 (lower is better)
Translates to: PKLQTSDWREKM*SERDSGAYQKM
Trigger: CATTTTCTGGTATGCCCCCGAATCCCTCTCGGACAACATCTTCTCTCGCCAGTCAGACGTCTGGAGCTTCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000458235.7
ENST00000527670.5
ENST00000534444.1
CDS CAA 90 bp ATAAAGGGTAATGAACACGGCTCCCATCCAGGGTGGCCCAGTGTGTaGCTGGGGCTGTCATATAGCGGCTCAGAACAGAGGTGGGAAGAA +
Preference number: 6 (lower is better)
Translates to: IKGNEHGSHPGWPSV*LGLSYSGSEQRWEE
Trigger: TTCTTCCCACCTCTGTTCTGAGCCGCTATATGACAGCCCCAGCAACACACTGGGCCACCCTGGATGGGAGCCGTGTTCATTACCCTTTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527031.5
CDS TCA 72 bp GGAAGAGCTGAGAGCTGGAGAGAGACTAGGTGCAGATaGCATGGCTCACATCTAGCTGTGCCTTTGGGTCTG +
Preference number: 6 (lower is better)
Translates to: GRAESWRETRCR*HGSHLAVPLGL
Trigger: CAGACCCAAAGGCACAGCTAGATGTGAGCCATGTCATCTGCACCTAGTCTCTCTCCAGCTCTCAGCTCTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526008.5
CDS CCA 72 bp AAGCCAGGTTTGTCTGACTTCAGGTCATTCTGGGGCTaGATATGGGTGAGAACCTGGAGCCGCTTTCCAAGG +
Preference number: 6 (lower is better)
Translates to: KPGLSDFRSFWG*IWVRTWSRFPR
Trigger: CCTTGGAAAGCGGCTCCAGGTTCTCACCCATATCCAGCCCCAGAATGACCTGAAGTCAGACAAACCTGGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527031.5
CDS CCA 72 bp TTCAGGTCATTCTGGGGCTGGATATGGGTGAGAACCTaGAGCCGCTTTCCAAGGAGTGATGATGGAGAGACA +
Preference number: 6 (lower is better)
Translates to: FRSFWGWIWVRT*SRFPRSDDGET
Trigger: TGTCTCTCCATCATCACTCCTTGGAAAGCGGCTCCAGGTTCTCACCCATATCCAGCCCCAGAATGACCTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527031.5
CDS CAA 72 bp ATTGGGGAAGTAAAAGCGAATCCTGTACAGCAGGACTaGGGTGCTGGCATCCTCCACGGAGAAGATGTGGCT +
Preference number: 6 (lower is better)
Translates to: IGEVKANPVQQD*GAGILHGEDVA
Trigger: AGCCACATCTTCTCCGTGGAGGATGCCAGCACCCAAGTCCTGCTGTACAGGATTCGCTTTTACTTCCCCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000458235.7
ENST00000526008.5
ENST00000527031.5
ENST00000527670.5
ENST00000534444.1
CDS TCA 72 bp CTCAGAATTGTCCCATCAGAGGGGTTTGTCCAGGAGTaGAATTCACCCAGAGGAAGAGCTGAGAGCTGGAGA +
Preference number: 6 (lower is better)
Translates to: LRIVPSEGFVQE*NSPRGRAESWR
Trigger: TCTCCAGCTCTCAGCTCTTCCTCTGGGTGAATTTCACTCCTGGACAAACCCCTCTGATGGGACAATTCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526008.5
CDS CAA 72 bp GCTGCTTCCAGGAATGACTCCATGCAGTTCTTGTGCTaGGCATCCATGACCTTCAGCAGCACCTCTGTCTTT +
Preference number: 6 (lower is better)
Translates to: AASRNDSMQFLC*ASMTFSSTSVF
Trigger: AAAGACAGAGGTGCTGCTGAAGGTCATGGATGCCAAGCACAAGAACTGCATGGAGTCATTCCTGGAAGCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000458235.7
ENST00000527031.5
ENST00000527670.5
ENST00000534444.1
CDS CCA 72 bp ATTAGAAAGCCAGGTTTGTCTGACTTCAGGTCATTCTaGGGCTGGATATGGGTGAGAACCTGGAGCCGCTTT +
Preference number: 6 (lower is better)
Translates to: IRKPGLSDFRSF*GWIWVRTWSRF
Trigger: AAAGCGGCTCCAGGTTCTCACCCATATCCAGCCCCAGAATGACCTGAAGTCAGACAAACCTGGCTTTCTAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527031.5
CDS CAA 90 bp CGATCAGGTTGGACTTTTATCTCAGAATTGTCCCATCAGAGGGGTTaGTCCAGGAGTGAAATTCACCCAGAGGAAGAGCTGAGAGCTGGA +
Preference number: 6 (lower is better)
Translates to: RSGWTFISELSHQRG*SRSEIHPEEELRAG
Trigger: TCCAGCTCTCAGCTCTTCCTCTGGGTGAATTTCACTCCTGGACAAACCCCTCTGATGGGACAATTCTGAGATAAAAGTCCAACCTGATCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526008.5
CDS CAA 90 bp TGTGACCTCTCTGGACCACGATCAGGTTGGACTTTTATCTCAGAATaGTCCCATCAGAGGGGTTTGTCCAGGAGTGAAATTCACCCAGAG +
Preference number: 6 (lower is better)
Translates to: CDLSGPRSGWTFISE*SHQRGLSRSEIHPE
Trigger: CTCTGGGTGAATTTCACTCCTGGACAAACCCCTCTGATGGGACAATTCTGAGATAAAAGTCCAACCTGATCGTGGTCCAGAGAGGTCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526008.5
CDS CAA 72 bp TGGACTTTTATCTCAGAATTGTCCCATCAGAGGGGTTaGTCCAGGAGTGAAATTCACCCAGAGGAAGAGCTG +
Preference number: 6 (lower is better)
Translates to: WTFISELSHQRG*SRSEIHPEEEL
Trigger: CAGCTCTTCCTCTGGGTGAATTTCACTCCTGGACAAACCCCTCTGATGGGACAATTCTGAGATAAAAGTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526008.5
CDS CAA 72 bp TCTGGACCACGATCAGGTTGGACTTTTATCTCAGAATaGTCCCATCAGAGGGGTTTGTCCAGGAGTGAAATT +
Preference number: 6 (lower is better)
Translates to: SGPRSGWTFISE*SHQRGLSRSEI
Trigger: AATTTCACTCCTGGACAAACCCCTCTGATGGGACAATTCTGAGATAAAAGTCCAACCTGATCGTGGTCCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526008.5