Pregenerated sensors for JAGN1 (Homo sapiens)
Ensembl gene IDs: ENSG00000171135Ensembl transcript IDs: ENST00000489724.2, ENST00000647897.1
Found 115 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ACCAAAGAGGAAACGGTAGGCCTTGCCATGGCGGTAGAGCTGCTGTaGAGCAGGGAACATCTCCATGCTGCCATAAATGAGTGGAGCGAT | + |
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Preference number: 1 (lower is better) Translates to: TKEETVGLAMAVELL*SREHLHAAINEWSD Trigger: ATCGCTCCACTCATTTATGGCAGCATGGAGATGTTCCCTGCTGCACAGCAGCTCTACCGCCATGGCAAGGCCTACCGTTTCCTCTTTGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000489724.2 |
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| 3UTR TCA 90 bp | CAAATACGGGTATTCCCACTGATAGGGCATGGCCACCTGATCATGTaGCAAGAGCCTCAGGTGTCCCACGCTCATCTTAGCAACCAGCAG | + |
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Preference number: 1 (lower is better) Translates to: QIRVFPLIGHGHLIM*QEPQVSHAHLSNQQ Trigger: CTGCTGGTTGCTAAGATGAGCGTGGGACACCTGAGGCTCTTGTCACATGATCAGGTGGCCATGCCCTATCAGTGGGAATACCCGTATTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000489724.2 |
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| 3UTR CCA 90 bp | AGGGCAAAATGCTCAGCAAATACGGGTATTCCCACTGATAGGGCATaGCCACCTGATCATGTGACAAGAGCCTCAGGTGTCCCACGCTCA | + |
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Preference number: 1 (lower is better) Translates to: RAKCSANTGIPTDRA*PPDHVTRASGVPRS Trigger: TGAGCGTGGGACACCTGAGGCTCTTGTCACATGATCAGGTGGCCATGCCCTATCAGTGGGAATACCCGTATTTGCTGAGCATTTTGCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000489724.2 |
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| 3UTR TCA 90 bp | ACTGCCAGGCATGCACTTGCACTGCCAACACCAACACCAGGTACATaGTGGAAACGGCAGAAAAACCAAAGAGGAAACGGTAGGCCTTGC | + |
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Preference number: 1 (lower is better) Translates to: TARHALALPTPTPGT*WKRQKNQRGNGRPC Trigger: GCAAGGCCTACCGTTTCCTCTTTGGTTTTTCTGCCGTTTCCATCATGTACCTGGTGTTGGTGTTGGCAGTGCAAGTGCATGCCTGGCAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000489724.2 |
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| 3UTR CCA 90 bp | TGCCACCTCAGCAGATGGCAAAAGGAGCTTTCCAGAACTTTGGCCTaGTCTGCACCAGGTACCAACATCACAGCTGCTAAAATCACCAGA | + |
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Preference number: 1 (lower is better) Translates to: CHLSRWQKELSRTLA*SAPGTNITAAKITR Trigger: TCTGGTGATTTTAGCAGCTGTGATGTTGGTACCTGGTGCAGACCAGGCCAAAGTTCTGGAAAGCTCCTTTTGCCATCTGCTGAGGTGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000489724.2 ENST00000647897.1 |
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| 3UTR GCA 90 bp | CATTCGATGGGATGTCCAGGCTTCACCCCAAAGAGGCTTCATTTATaGTTCTTCTCCTGTGTGCTGGTGAACCAAGAGTCTAGGAGCTTC | + |
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Preference number: 1 (lower is better) Translates to: HSMGCPGFTPKRLHL*FFSCVLVNQESRSF Trigger: GAAGCTCCTAGACTCTTGGTTCACCAGCACACAGGAGAAGAAGCATAAATGAAGCCTCTTTGGGGTGAAGCCTGGACATCCCATCGAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000489724.2 |
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| 3UTR TCA 90 bp | TCACCCCAAAGAGGCTTCATTTATGCTTCTTCTCCTGTGTGCTGGTaGACCAAGAGTCTAGGAGCTTCTTGCTGTAGTACAACTGCCAGG | + |
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Preference number: 1 (lower is better) Translates to: SPQRGFIYASSPVCW*TKSLGASCCSTTAR Trigger: CCTGGCAGTTGTACTACAGCAAGAAGCTCCTAGACTCTTGGTTCACCAGCACACAGGAGAAGAAGCATAAATGAAGCCTCTTTGGGGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000489724.2 |
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| 3UTR-3UTR GCA 90 bp | GTACTAGTGTCCTTTCATTCGATGGGATGTCCAGGCTTCACCCCAAAGAGGCTTGGAAACGGTAGGCCTTaGCATGGCGGTAGAGCTGCT | + |
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Preference number: 2 (lower is better) Translates to: VLVSFHSMGCPGFTPKRLGNGRP*HGGRAA Trigger: AGCAGCTCTACCGCCATGGCAAGGCCTACCGTTTCC...AAGCCTCTTTGGGGTGAAGCCTGGACATCCCATCGAATGAAAGGACACTAGTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000489724.2 |
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| 3UTR-3UTR GCA 90 bp | CACCCCAAAGAGGCTTCATTTATGCTTCTTCTCCTGTGTGCTGGTGAACCAAGATGCCAGGCATGCACTTaGACTGCCAACACCAACACC | + |
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Preference number: 2 (lower is better) Translates to: HPKEASFMLLLLCAGEPRCQACT*TANTNT Trigger: GGTGTTGGTGTTGGCAGTGCAAGTGCATGCCTGGCA...TCTTGGTTCACCAGCACACAGGAGAAGAAGCATAAATGAAGCCTCTTTGGGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000489724.2 |
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| 3UTR-3UTR GCA 90 bp | GTACTAGTGTCCTTTCATTCGATGGGATGTCCAGGCTTCACCCCAAAGAGGCTTTACAACTGCCAGGCATaGACTTGCACTGCCAACACC | + |
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Preference number: 2 (lower is better) Translates to: VLVSFHSMGCPGFTPKRLYNCQA*TCTANT Trigger: GGTGTTGGCAGTGCAAGTGCATGCCTGGCAGTTGTA...AAGCCTCTTTGGGGTGAAGCCTGGACATCCCATCGAATGAAAGGACACTAGTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000489724.2 |
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| 3UTR-3UTR CCA 90 bp | GTACTAGTGTCCTTTCATTCGATGGGATGTCCAGGCTTCACCCCAAAGAGGCTTCCCACTGATAGGGCATaGCCACCTGATCATGTGACA | + |
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Preference number: 2 (lower is better) Translates to: VLVSFHSMGCPGFTPKRLPTDRA*PPDHVT Trigger: TGTCACATGATCAGGTGGCCATGCCCTATCAGTGGG...AAGCCTCTTTGGGGTGAAGCCTGGACATCCCATCGAATGAAAGGACACTAGTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000489724.2 |
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| 3UTR-3UTR TCA 90 bp | CACCAGGTACCAACATCACAGCTGCTAAAATCACCAGAAGGGATTTTGGAACCGCCATGCTGCCATAAATaGGTGGAGCGATGGAAAAGA | + |
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Preference number: 2 (lower is better) Translates to: HQVPTSQLLKSPEGILEPPCCHK*VERWKR Trigger: TCTTTTCCATCGCTCCACTCATTTATGGCAGCATGG...CGGTTCCAAAATCCCTTCTGGTGATTTTAGCAGCTGTGATGTTGGTACCTGGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000489724.2 |
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| 3UTR-3UTR CCA 90 bp | TTTCATAGCTGTTGGTCACCCAGTTCTAGCCAACCAGGAATAAATTATAGTTTTTTGAGAGTCACACTGTaGGGCAGAGCAGAGGGAGAA | + |
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Preference number: 2 (lower is better) Translates to: FHSCWSPSSSQPGINYSFLRVTL*GRAEGE Trigger: TTCTCCCTCTGCTCTGCCCCACAGTGTGACTCTCAA...AAAACTATAATTTATTCCTGGTTGGCTAGAACTGGGTGACCAACAGCTATGAAA 43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENST00000489724.2 |
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| 3UTR-3UTR TCA 90 bp | AATTTGTTTCATAGCTGTTGGTCACCCAGTTCTAGCCAACCAGGAATAAATTATCCAGCAGCAGCCATATaGCCAGATGTACGTAGATCA | + |
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Preference number: 2 (lower is better) Translates to: NLFHSCWSPSSSQPGINYPAAAI*PDVRRS Trigger: TGATCTACGTACATCTGGTCATATGGCTGCTGCTGG...ATAATTTATTCCTGGTTGGCTAGAACTGGGTGACCAACAGCTATGAAACAAATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000489724.2 |
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| 3UTR GCA 72 bp | GAAACGGTAGGCCTTGCCATGGCGGTAGAGCTGCTGTaGAGCAGGGAACATCTCCATGCTGCCATAAATGAG | + |
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Preference number: 3 (lower is better) Translates to: ETVGLAMAVELL*SREHLHAAINE Trigger: CTCATTTATGGCAGCATGGAGATGTTCCCTGCTGCACAGCAGCTCTACCGCCATGGCAAGGCCTACCGTTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000489724.2 |
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| 3UTR TCA 72 bp | GTATTCCCACTGATAGGGCATGGCCACCTGATCATGTaGCAAGAGCCTCAGGTGTCCCACGCTCATCTTAGC | + |
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Preference number: 3 (lower is better) Translates to: VFPLIGHGHLIM*QEPQVSHAHLS Trigger: GCTAAGATGAGCGTGGGACACCTGAGGCTCTTGTCACATGATCAGGTGGCCATGCCCTATCAGTGGGAATAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000489724.2 |
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| 3UTR GCA 72 bp | AAACGGCAGAAAAACCAAAGAGGAAACGGTAGGCCTTaGCATGGCGGTAGAGCTGCTGTGCAGCAGGGAACA | + |
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Preference number: 3 (lower is better) Translates to: KRQKNQRGNGRP*HGGRAAVQQGT Trigger: TGTTCCCTGCTGCACAGCAGCTCTACCGCCATGGCAAGGCCTACCGTTTCCTCTTTGGTTTTTCTGCCGTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000489724.2 |
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| 3UTR GCA 72 bp | CTTGCTGTAGTACAACTGCCAGGCATGCACTTGCACTaGCAACACCAACACCAGGTACATGATGGAAACGGC | + |
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Preference number: 3 (lower is better) Translates to: LAVVQLPGMHLH*QHQHQVHDGNG Trigger: GCCGTTTCCATCATGTACCTGGTGTTGGTGTTGGCAGTGCAAGTGCATGCCTGGCAGTTGTACTACAGCAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000489724.2 |
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| 3UTR CCA 72 bp | TGCTCAGCAAATACGGGTATTCCCACTGATAGGGCATaGCCACCTGATCATGTGACAAGAGCCTCAGGTGTC | + |
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Preference number: 3 (lower is better) Translates to: CSANTGIPTDRA*PPDHVTRASGV Trigger: GACACCTGAGGCTCTTGTCACATGATCAGGTGGCCATGCCCTATCAGTGGGAATACCCGTATTTGCTGAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000489724.2 |
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| 3UTR CCA 72 bp | AGCAGATGGCAAAAGGAGCTTTCCAGAACTTTGGCCTaGTCTGCACCAGGTACCAACATCACAGCTGCTAAA | + |
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Preference number: 3 (lower is better) Translates to: SRWQKELSRTLA*SAPGTNITAAK Trigger: TTTAGCAGCTGTGATGTTGGTACCTGGTGCAGACCAGGCCAAAGTTCTGGAAAGCTCCTTTTGCCATCTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000489724.2 ENST00000647897.1 |
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| 3UTR-3UTR CAA 90 bp | TCTTGCTGTAGTACAACTGCCAGGCATGCACTTGCACTGCCAACACCAACACCATTCTTGATTTCATACTaGAGAGTCACACTGTGGGGC | + |
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Preference number: 3 (lower is better) Translates to: SCCSTTARHALALPTPTPFLISY*RVTLWG Trigger: GCCCCACAGTGTGACTCTCAAGTATGAAATCAAGAA...TGGTGTTGGTGTTGGCAGTGCAAGTGCATGCCTGGCAGTTGTACTACAGCAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000489724.2 |
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| 3UTR TCA 72 bp | AGAGGCTTCATTTATGCTTCTTCTCCTGTGTGCTGGTaGACCAAGAGTCTAGGAGCTTCTTGCTGTAGTACA | + |
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Preference number: 3 (lower is better) Translates to: RGFIYASSPVCW*TKSLGASCCST Trigger: TGTACTACAGCAAGAAGCTCCTAGACTCTTGGTTCACCAGCACACAGGAGAAGAAGCATAAATGAAGCCTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000489724.2 |
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| CDS-3UTR TCA 90 bp | CAGCAGATGGCAAAAGGAGCTTTCCAGAACTTTGGCCTGGTCTGCACCAGGTACCGCCAAGCGGCCCACTaGCCCTATTTGCGCCCCCGC | + |
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Preference number: 4 (lower is better) Translates to: QQMAKGAFQNFGLVCTRYRQAAH*PYLRPR Trigger: GCGGGGGCGCAAATAGGGTCAGTGGGCCGCTTGGCG...GTACCTGGTGCAGACCAGGCCAAAGTTCTGGAAAGCTCCTTTTGCCATCTGCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000489724.2 ENST00000647897.1 |
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| CDS-3UTR CCA 90 bp | CCTCAGCAGATGGCAAAAGGAGCTTTCCAGAACTTTGGCCTGGTCTGCACCAGGCCCCTCACGCGGACCTaGTACCGCAACGACACCGCC | + |
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Preference number: 4 (lower is better) Translates to: PQQMAKGAFQNFGLVCTRPLTRT*YRNDTA Trigger: GGCGGTGTCGTTGCGGTACCAGGTCCGCGTGAGGGG...CCTGGTGCAGACCAGGCCAAAGTTCTGGAAAGCTCCTTTTGCCATCTGCTGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000489724.2 ENST00000647897.1 |
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| CDS-3UTR TCA 90 bp | GTTCCCCATACCCAGTCTACTTCTCTATGGCCACTGCTAGGTTTCTCAAGGAGCCGCCAAGCGGCCCACTaGCCCTATTTGCGCCCCCGC | + |
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Preference number: 4 (lower is better) Translates to: VPHTQSTSLWPLLGFSRSRQAAH*PYLRPR Trigger: GCGGGGGCGCAAATAGGGTCAGTGGGCCGCTTGGCG...GCTCCTTGAGAAACCTAGCAGTGGCCATAGAGAAGTAGACTGGGTATGGGGAAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000647897.1 |
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| CDS-3UTR TCA 90 bp | ACCGCTGTACTAGTGTCCTTTCATTCGATGGGATGTCCAGGCTTCACCCCAAAGACGCGCTCCCGGTGCTaGAAGTCGCTGCCGTCGGTG | + |
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Preference number: 4 (lower is better) Translates to: TAVLVSFHSMGCPGFTPKTRSRC*KSLPSV Trigger: CACCGACGGCAGCGACTTTCAGCACCGGGAGCGCGT...CTTTGGGGTGAAGCCTGGACATCCCATCGAATGAAAGGACACTAGTACAGCGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000489724.2 ENST00000647897.1 |
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| CDS-3UTR GCA 90 bp | CATGATGGAAACGGCAGAAAAACCAAAGAGGAAACGGTAGGCCTTGCCATGGCGGGTGCTGAAAGTCGCTaGCGTCGGTGCCGGCCGCTC | + |
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Preference number: 4 (lower is better) Translates to: HDGNGRKTKEETVGLAMAGAESR*RRCRPL Trigger: GAGCGGCCGGCACCGACGGCAGCGACTTTCAGCACC...CGCCATGGCAAGGCCTACCGTTTCCTCTTTGGTTTTTCTGCCGTTTCCATCATG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000489724.2 |
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| CDS-3UTR GCA 90 bp | GGTCTGCACCAGGTACCAACATCACAGCTGCTAAAATCACCAGAAGGGATTTTGCCCACTGACCCTATTTaGGCCCCCGCAGCCGCGCGG | + |
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Preference number: 4 (lower is better) Translates to: GLHQVPTSQLLKSPEGILPTDPI*APAAAR Trigger: CCGCGCGGCTGCGGGGGCGCAAATAGGGTCAGTGGG...CAAAATCCCTTCTGGTGATTTTAGCAGCTGTGATGTTGGTACCTGGTGCAGACC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000489724.2 ENST00000647897.1 |
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| CDS-3UTR GCA 90 bp | GGTCTGCACCAGGTACCAACATCACAGCTGCTAAAATCACCAGAAGGGATTTTGGGCCGCTCGCGGGCCTaGTCGAGACGCCATTGTGCC | + |
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Preference number: 4 (lower is better) Translates to: GLHQVPTSQLLKSPEGILGRSRA*SRRHCA Trigger: GGCACAATGGCGTCTCGAGCAGGCCCGCGAGCGGCC...CAAAATCCCTTCTGGTGATTTTAGCAGCTGTGATGTTGGTACCTGGTGCAGACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000489724.2 ENST00000647897.1 |
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| CDS-3UTR GCA 90 bp | TTAGGTTCCCCATACCCAGTCTACTTCTCTATGGCCACTGCTAGGTTTCTCAAGGGCCGCTCGCGGGCCTaGTCGAGACGCCATTGTGCC | + |
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Preference number: 4 (lower is better) Translates to: LGSPYPVYFSMATARFLKGRSRA*SRRHCA Trigger: GGCACAATGGCGTCTCGAGCAGGCCCGCGAGCGGCC...CTTGAGAAACCTAGCAGTGGCCATAGAGAAGTAGACTGGGTATGGGGAACCTAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647897.1 |
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| CDS-3UTR TCA 90 bp | GCACCAGGTACCAACATCACAGCTGCTAAAATCACCAGAAGGGATTTTGGAACCACGCGCTCCCGGTGCTaGAAGTCGCTGCCGTCGGTG | + |
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Preference number: 4 (lower is better) Translates to: APGTNITAAKITRRDFGTTRSRC*KSLPSV Trigger: CACCGACGGCAGCGACTTTCAGCACCGGGAGCGCGT...GGTTCCAAAATCCCTTCTGGTGATTTTAGCAGCTGTGATGTTGGTACCTGGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000489724.2 ENST00000647897.1 |
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| CDS-3UTR GCA 90 bp | AGCAACCAGCAGCAGCCATATGACCAGATGTACGTAGATCAGCTTCTTGATTTCCCCACTGACCCTATTTaGGCCCCCGCAGCCGCGCGG | + |
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Preference number: 4 (lower is better) Translates to: SNQQQPYDQMYVDQLLDFPTDPI*APAAAR Trigger: CCGCGCGGCTGCGGGGGCGCAAATAGGGTCAGTGGG...GAAATCAAGAAGCTGATCTACGTACATCTGGTCATATGGCTGCTGCTGGTTGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000489724.2 |
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| CDS-3UTR CCA 90 bp | CAGCAGATGGCAAAAGGAGCTTTCCAGAACTTTGGCCTGGTCTGCACCAGGTACTCATCTGGTAGTGCATaGCGACGCGCTCCCGGTGCT | + |
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Preference number: 4 (lower is better) Translates to: QQMAKGAFQNFGLVCTRYSSGSA*RRAPGA Trigger: AGCACCGGGAGCGCGTCGCCATGCACTACCAGATGA...GTACCTGGTGCAGACCAGGCCAAAGTTCTGGAAAGCTCCTTTTGCCATCTGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000489724.2 ENST00000647897.1 |
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| CDS-3UTR GCA 90 bp | TCCCCATACCCAGTCTACTTCTCTATGGCCACTGCTAGGTTTCTCAAGGAGCTTAGACGCCATTGTGCCTaGCCAGAACCCCCGAACCCC | + |
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Preference number: 4 (lower is better) Translates to: SPYPVYFSMATARFLKELRRHCA*PEPPNP Trigger: GGGGTTCGGGGGTTCTGGGCAGGCACAATGGCGTCT...AAGCTCCTTGAGAAACCTAGCAGTGGCCATAGAGAAGTAGACTGGGTATGGGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000647897.1 |
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| CDS-3UTR CCA 90 bp | AGATGGCAAAAGGAGCTTTCCAGAACTTTGGCCTGGTCTGCACCAGGTACCAACTCATCTGGTAGTGCATaGCGACGCGCTCCCGGTGCT | + |
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Preference number: 4 (lower is better) Translates to: RWQKELSRTLAWSAPGTNSSGSA*RRAPGA Trigger: AGCACCGGGAGCGCGTCGCCATGCACTACCAGATGA...GTTGGTACCTGGTGCAGACCAGGCCAAAGTTCTGGAAAGCTCCTTTTGCCATCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000489724.2 ENST00000647897.1 |
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| CDS-3UTR GCA 90 bp | GCACCAGGTACCAACATCACAGCTGCTAAAATCACCAGAAGGGATTTTGGAACCAGACGCCATTGTGCCTaGCCAGAACCCCCGAACCCC | + |
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Preference number: 4 (lower is better) Translates to: APGTNITAAKITRRDFGTRRHCA*PEPPNP Trigger: GGGGTTCGGGGGTTCTGGGCAGGCACAATGGCGTCT...GGTTCCAAAATCCCTTCTGGTGATTTTAGCAGCTGTGATGTTGGTACCTGGTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000489724.2 ENST00000647897.1 |
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| CDS-3UTR GCA 90 bp | CATGATGGAAACGGCAGAAAAACCAAAGAGGAAACGGTAGGCCTTGCCATGGCGGGAAACGGTAGGCCTTaGCATGGCGGTAGAGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: HDGNGRKTKEETVGLAMAGNGRP*HGGRAA Trigger: AGCAGCTCTACCGCCATGGCAAGGCCTACCGTTTCC...CGCCATGGCAAGGCCTACCGTTTCCTCTTTGGTTTTTCTGCCGTTTCCATCATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000489724.2 |
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| CDS-3UTR GCA 90 bp | AAGAGCCTCAGGTGTCCCACGCTCATCTTAGCAACCAGCAGCAGCCATATGACCTACAACTGCCAGGCATaGACTTGCACTGCCAACACC | + |
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Preference number: 4 (lower is better) Translates to: KSLRCPTLILATSSSHMTYNCQA*TCTANT Trigger: GGTGTTGGCAGTGCAAGTGCATGCCTGGCAGTTGTA...GGTCATATGGCTGCTGCTGGTTGCTAAGATGAGCGTGGGACACCTGAGGCTCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000489724.2 |
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| CDS-3UTR CCA 90 bp | AAGAGCCTCAGGTGTCCCACGCTCATCTTAGCAACCAGCAGCAGCCATATGACCCCCACTGATAGGGCATaGCCACCTGATCATGTGACA | + |
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Preference number: 4 (lower is better) Translates to: KSLRCPTLILATSSSHMTPTDRA*PPDHVT Trigger: TGTCACATGATCAGGTGGCCATGCCCTATCAGTGGG...GGTCATATGGCTGCTGCTGGTTGCTAAGATGAGCGTGGGACACCTGAGGCTCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000489724.2 |
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| CDS-3UTR TCA 90 bp | CCTCAGCAGATGGCAAAAGGAGCTTTCCAGAACTTTGGCCTGGTCTGCACCAGGCCAGCAGCAGCCATATaGCCAGATGTACGTAGATCA | + |
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Preference number: 4 (lower is better) Translates to: PQQMAKGAFQNFGLVCTRPAAAI*PDVRRS Trigger: TGATCTACGTACATCTGGTCATATGGCTGCTGCTGG...CCTGGTGCAGACCAGGCCAAAGTTCTGGAAAGCTCCTTTTGCCATCTGCTGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000489724.2 ENST00000647897.1 |
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| CDS-3UTR GCA 90 bp | TGTCTGGCCCATAGTTCTTACCAATCAGCTGTAGGTTACAACTATGACTTAGGTGGTGCTGAAAGTCGCTaGCGTCGGTGCCGGCCGCTC | + |
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Preference number: 4 (lower is better) Translates to: CLAHSSYQSAVGYNYDLGGAESR*RRCRPL Trigger: GAGCGGCCGGCACCGACGGCAGCGACTTTCAGCACC...ACCTAAGTCATAGTTGTAACCTACAGCTGATTGGTAAGAACTATGGGCCAGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647897.1 |
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| CDS-3UTR GCA 90 bp | CAGCAGATGGCAAAAGGAGCTTTCCAGAACTTTGGCCTGGTCTGCACCAGGTACGGCATGCACTTGCACTaGCAACACCAACACCAGGTA | + |
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Preference number: 4 (lower is better) Translates to: QQMAKGAFQNFGLVCTRYGMHLH*QHQHQV Trigger: TACCTGGTGTTGGTGTTGGCAGTGCAAGTGCATGCC...GTACCTGGTGCAGACCAGGCCAAAGTTCTGGAAAGCTCCTTTTGCCATCTGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000489724.2 ENST00000647897.1 |
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| CDS-3UTR GCA 90 bp | TCTTGCTGTAGTACAACTGCCAGGCATGCACTTGCACTGCCAACACCAACACCATGCCAGGCATGCACTTaGACTGCCAACACCAACACC | + |
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Preference number: 4 (lower is better) Translates to: SCCSTTARHALALPTPTPCQACT*TANTNT Trigger: GGTGTTGGTGTTGGCAGTGCAAGTGCATGCCTGGCA...TGGTGTTGGTGTTGGCAGTGCAAGTGCATGCCTGGCAGTTGTACTACAGCAAGA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000489724.2 |
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| CDS-3UTR TCA 90 bp | CACCCCAAAGAGGCTTCATTTATGCTTCTTCTCCTGTGTGCTGGTGAACCAAGAGGCCACCTGATCATGTaGCAAGAGCCTCAGGTGTCC | + |
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Preference number: 4 (lower is better) Translates to: HPKEASFMLLLLCAGEPRGHLIM*QEPQVS Trigger: GGACACCTGAGGCTCTTGTCACATGATCAGGTGGCC...TCTTGGTTCACCAGCACACAGGAGAAGAAGCATAAATGAAGCCTCTTTGGGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000489724.2 |
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| CDS-3UTR TCA 90 bp | GTTCCCCATACCCAGTCTACTTCTCTATGGCCACTGCTAGGTTTCTCAAGGAGCTCTCCTGTGTGCTGGTaGACCAAGAGTCTAGGAGCT | + |
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Preference number: 4 (lower is better) Translates to: VPHTQSTSLWPLLGFSRSSPVCW*TKSLGA Trigger: AGCTCCTAGACTCTTGGTTCACCAGCACACAGGAGA...GCTCCTTGAGAAACCTAGCAGTGGCCATAGAGAAGTAGACTGGGTATGGGGAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647897.1 |
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| CDS-3UTR GCA 90 bp | CTGCACCAGGTACCAACATCACAGCTGCTAAAATCACCAGAAGGGATTTTGGAACTCGAGACGCCATTGTaGCTGCCCAGAACCCCCGAA | + |
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Preference number: 4 (lower is better) Translates to: LHQVPTSQLLKSPEGILELETPL*LPRTPE Trigger: TTCGGGGGTTCTGGGCAGGCACAATGGCGTCTCGAG...TTCCAAAATCCCTTCTGGTGATTTTAGCAGCTGTGATGTTGGTACCTGGTGCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000489724.2 ENST00000647897.1 |
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| CDS-3UTR GCA 90 bp | GGTCTGCACCAGGTACCAACATCACAGCTGCTAAAATCACCAGAAGGGATTTTGGGAAACGGTAGGCCTTaGCATGGCGGTAGAGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: GLHQVPTSQLLKSPEGILGNGRP*HGGRAA Trigger: AGCAGCTCTACCGCCATGGCAAGGCCTACCGTTTCC...CAAAATCCCTTCTGGTGATTTTAGCAGCTGTGATGTTGGTACCTGGTGCAGACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000489724.2 ENST00000647897.1 |
||
| CDS-3UTR CCA 90 bp | AGATGGCAAAAGGAGCTTTCCAGAACTTTGGCCTGGTCTGCACCAGGTACCAACCCCACTGATAGGGCATaGCCACCTGATCATGTGACA | + |
|
Preference number: 4 (lower is better) Translates to: RWQKELSRTLAWSAPGTNPTDRA*PPDHVT Trigger: TGTCACATGATCAGGTGGCCATGCCCTATCAGTGGG...GTTGGTACCTGGTGCAGACCAGGCCAAAGTTCTGGAAAGCTCCTTTTGCCATCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000489724.2 ENST00000647897.1 |
||
| CDS-3UTR TCA 90 bp | CTGCACCAGGTACCAACATCACAGCTGCTAAAATCACCAGAAGGGATTTTGGAAGGCCACCTGATCATGTaGCAAGAGCCTCAGGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LHQVPTSQLLKSPEGILEGHLIM*QEPQVS Trigger: GGACACCTGAGGCTCTTGTCACATGATCAGGTGGCC...TTCCAAAATCCCTTCTGGTGATTTTAGCAGCTGTGATGTTGGTACCTGGTGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000489724.2 ENST00000647897.1 |
||
| CDS-3UTR TCA 90 bp | GCAACACACCTTTCACACTCTATCAAGCCCCAAACACAAGGCACAGTGTGGGCAAAAAGAGTCCCATGCTaGTCATGGAGAGCACCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: ATHLSHSIKPQTQGTVWAKRVPC*SWRAPG Trigger: ACCTGGTGCTCTCCATGATCAGCATGGGACTCTTTT...TGCCCACACTGTGCCTTGTGTTTGGGGCTTGATAGAGTGTGAAAGGTGTGTTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000647897.1 |
||
| CDS-3UTR TCA 90 bp | CAGCAGATGGCAAAAGGAGCTTTCCAGAACTTTGGCCTGGTCTGCACCAGGTACCCAACACCAGGTACATaGTGGAAACGGCAGAAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: QQMAKGAFQNFGLVCTRYPTPGT*WKRQKN Trigger: GTTTTTCTGCCGTTTCCATCATGTACCTGGTGTTGG...GTACCTGGTGCAGACCAGGCCAAAGTTCTGGAAAGCTCCTTTTGCCATCTGCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000489724.2 ENST00000647897.1 |
||
| CDS-3UTR CCA 90 bp | CGCTGTACTAGTGTCCTTTCATTCGATGGGATGTCCAGGCTTCACCCCAAAGAGTGTCCTTTCATTCGATaGGATGTCCAGGCTTCACCC | + |
|
Preference number: 4 (lower is better) Translates to: RCTSVLSFDGMSRLHPKECPFIR*DVQASP Trigger: GGGTGAAGCCTGGACATCCCATCGAATGAAAGGACA...CTCTTTGGGGTGAAGCCTGGACATCCCATCGAATGAAAGGACACTAGTACAGCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000489724.2 ENST00000647897.1 |
||
| 3UTR CAA 72 bp | GAGCTTCTTGCTGTAGTACAACTGCCAGGCATGCACTaGCACTGCCAACACCAACACCAGGTACATGATGGA | + |
|
Preference number: 4 (lower is better) Translates to: ELLAVVQLPGMH*HCQHQHQVHDG Trigger: TCCATCATGTACCTGGTGTTGGTGTTGGCAGTGCAAGTGCATGCCTGGCAGTTGTACTACAGCAAGAAGCTC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000489724.2 |
||
| CDS-3UTR TCA 90 bp | GTACTAGTGTCCTTTCATTCGATGGGATGTCCAGGCTTCACCCCAAAGAGGCTTCCAGCAGCAGCCATATaGCCAGATGTACGTAGATCA | + |
|
Preference number: 4 (lower is better) Translates to: VLVSFHSMGCPGFTPKRLPAAAI*PDVRRS Trigger: TGATCTACGTACATCTGGTCATATGGCTGCTGCTGG...AAGCCTCTTTGGGGTGAAGCCTGGACATCCCATCGAATGAAAGGACACTAGTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000489724.2 |
||
| CDS-3UTR TCA 90 bp | TGGAGCGATGGAAAAGAGTCCCATGCTGATCATGGAGAGCACCAGGTAGCTAATAAAAGAGTCCCATGCTaGTCATGGAGAGCACCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: WSDGKESHADHGEHQVANKRVPC*SWRAPG Trigger: ACCTGGTGCTCTCCATGATCAGCATGGGACTCTTTT...ATTAGCTACCTGGTGCTCTCCATGATCAGCATGGGACTCTTTTCCATCGCTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000489724.2 |
||
| CDS-3UTR TCA 90 bp | AGTCTAGGAGCTTCTTGCTGTAGTACAACTGCCAGGCATGCACTTGCACTGCCACCATGCTGCCATAAATaGGTGGAGCGATGGAAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: SLGASCCSTTARHALALPPCCHK*VERWKR Trigger: TCTTTTCCATCGCTCCACTCATTTATGGCAGCATGG...TGGCAGTGCAAGTGCATGCCTGGCAGTTGTACTACAGCAAGAAGCTCCTAGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000489724.2 |
||
| CDS-3UTR TCA 90 bp | GCAACACACCTTTCACACTCTATCAAGCCCCAAACACAAGGCACAGTGTGGGCACCAACACCAGGTACATaGTGGAAACGGCAGAAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: ATHLSHSIKPQTQGTVWAPTPGT*WKRQKN Trigger: GTTTTTCTGCCGTTTCCATCATGTACCTGGTGTTGG...TGCCCACACTGTGCCTTGTGTTTGGGGCTTGATAGAGTGTGAAAGGTGTGTTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000647897.1 |
||
| CDS-3UTR TCA 90 bp | CACCAGGTACCAACATCACAGCTGCTAAAATCACCAGAAGGGATTTTGGAACCGTCTCCTGTGTGCTGGTaGACCAAGAGTCTAGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: HQVPTSQLLKSPEGILEPSPVCW*TKSLGA Trigger: AGCTCCTAGACTCTTGGTTCACCAGCACACAGGAGA...CGGTTCCAAAATCCCTTCTGGTGATTTTAGCAGCTGTGATGTTGGTACCTGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000489724.2 ENST00000647897.1 |
||
| CDS-3UTR GCA 90 bp | AGCAACCAGCAGCAGCCATATGACCAGATGTACGTAGATCAGCTTCTTGATTTCGCGGTAGAGCTGCTGTaGAGCAGGGAACATCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: SNQQQPYDQMYVDQLLDFAVELL*SREHLH Trigger: ATGGAGATGTTCCCTGCTGCACAGCAGCTCTACCGC...GAAATCAAGAAGCTGATCTACGTACATCTGGTCATATGGCTGCTGCTGGTTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000489724.2 |
||
| CDS-3UTR GCA 90 bp | TCTGCACCAGGTACCAACATCACAGCTGCTAAAATCACCAGAAGGGATTTTGGAGCGGTAGAGCTGCTGTaGAGCAGGGAACATCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: SAPGTNITAAKITRRDFGAVELL*SREHLH Trigger: ATGGAGATGTTCCCTGCTGCACAGCAGCTCTACCGC...TCCAAAATCCCTTCTGGTGATTTTAGCAGCTGTGATGTTGGTACCTGGTGCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000489724.2 ENST00000647897.1 |
||
| CDS-3UTR GCA 90 bp | ACCCATCATCTCCTAGTGTCTAAGGCCACACCTTTCAAGCAACACACCTTTCACGGCATGCACTTGCACTaGCAACACCAACACCAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: THHLLVSKATPFKQHTFHGMHLH*QHQHQV Trigger: TACCTGGTGTTGGTGTTGGCAGTGCAAGTGCATGCC...GTGAAAGGTGTGTTGCTTGAAAGGTGTGGCCTTAGACACTAGGAGATGATGGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647897.1 |
||
| CDS-3UTR GCA 90 bp | CTGCACCAGGTACCAACATCACAGCTGCTAAAATCACCAGAAGGGATTTTGGAATGCCAGGCATGCACTTaGACTGCCAACACCAACACC | + |
|
Preference number: 4 (lower is better) Translates to: LHQVPTSQLLKSPEGILECQACT*TANTNT Trigger: GGTGTTGGTGTTGGCAGTGCAAGTGCATGCCTGGCA...TTCCAAAATCCCTTCTGGTGATTTTAGCAGCTGTGATGTTGGTACCTGGTGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000489724.2 ENST00000647897.1 |
||
| CDS-3UTR GCA 90 bp | GCACCAGGTACCAACATCACAGCTGCTAAAATCACCAGAAGGGATTTTGGAACCTACAACTGCCAGGCATaGACTTGCACTGCCAACACC | + |
|
Preference number: 4 (lower is better) Translates to: APGTNITAAKITRRDFGTYNCQA*TCTANT Trigger: GGTGTTGGCAGTGCAAGTGCATGCCTGGCAGTTGTA...GGTTCCAAAATCCCTTCTGGTGATTTTAGCAGCTGTGATGTTGGTACCTGGTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000489724.2 ENST00000647897.1 |
||
| CDS-3UTR CCA 90 bp | AATTTGTTTCATAGCTGTTGGTCACCCAGTTCTAGCCAACCAGGAATAAATTATCCCCTCACGCGGACCTaGTACCGCAACGACACCGCC | + |
|
Preference number: 4 (lower is better) Translates to: NLFHSCWSPSSSQPGINYPLTRT*YRNDTA Trigger: GGCGGTGTCGTTGCGGTACCAGGTCCGCGTGAGGGG...ATAATTTATTCCTGGTTGGCTAGAACTGGGTGACCAACAGCTATGAAACAAATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000489724.2 ENST00000647897.1 |
||
| CDS-3UTR CCA 90 bp | GGTCTGCACCAGGTACCAACATCACAGCTGCTAAAATCACCAGAAGGGATTTTGTTGAGAGTCACACTGTaGGGCAGAGCAGAGGGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: GLHQVPTSQLLKSPEGILLRVTL*GRAEGE Trigger: TTCTCCCTCTGCTCTGCCCCACAGTGTGACTCTCAA...CAAAATCCCTTCTGGTGATTTTAGCAGCTGTGATGTTGGTACCTGGTGCAGACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000489724.2 |
||
| CDS-3UTR CCA 90 bp | AGTCTAGGAGCTTCTTGCTGTAGTACAACTGCCAGGCATGCACTTGCACTGCCACACCAGAAGGGATTTTaGAACCGCTGTACTAGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: SLGASCCSTTARHALALPHQKGF*NRCTSV Trigger: GACACTAGTACAGCGGTTCCAAAATCCCTTCTGGTG...TGGCAGTGCAAGTGCATGCCTGGCAGTTGTACTACAGCAAGAAGCTCCTAGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000489724.2 |
||
| CDS-3UTR CCA 90 bp | GGTCTGCACCAGGTACCAACATCACAGCTGCTAAAATCACCAGAAGGGATTTTGTGCCACCTCAGCAGATaGCAAAAGGAGCTTTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: GLHQVPTSQLLKSPEGILCHLSR*QKELSR Trigger: TCTGGAAAGCTCCTTTTGCCATCTGCTGAGGTGGCA...CAAAATCCCTTCTGGTGATTTTAGCAGCTGTGATGTTGGTACCTGGTGCAGACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000489724.2 ENST00000647897.1 |
||
| CDS-3UTR TCA 90 bp | CGCTGTACTAGTGTCCTTTCATTCGATGGGATGTCCAGGCTTCACCCCAAAGAGATGTTTCCTGACCCGTaGCCTAGAGATGAAGTAATT | + |
|
Preference number: 4 (lower is better) Translates to: RCTSVLSFDGMSRLHPKEMFPDP*PRDEVI Trigger: AATTACTTCATCTCTAGGTCACGGGTCAGGAAACAT...CTCTTTGGGGTGAAGCCTGGACATCCCATCGAATGAAAGGACACTAGTACAGCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000489724.2 ENST00000647897.1 |
||
| CDS-3UTR TCA 90 bp | GCTTCTACCCATCATCTCCTAGTGTCTAAGGCCACACCTTTCAAGCAACACACCTGTAGGTTACAACTATaGCTTAGGTTCCCCATACCC | + |
|
Preference number: 4 (lower is better) Translates to: ASTHHLLVSKATPFKQHTCRLQL*LRFPIP Trigger: GGGTATGGGGAACCTAAGTCATAGTTGTAACCTACA...GGTGTGTTGCTTGAAAGGTGTGGCCTTAGACACTAGGAGATGATGGGTAGAAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647897.1 |
||
| CDS-3UTR GCA 90 bp | CACCAGGTACCAACATCACAGCTGCTAAAATCACCAGAAGGGATTTTGGAACCGAGTCTAGGAGCTTCTTaGTGTAGTACAACTGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: HQVPTSQLLKSPEGILEPSLGAS*CSTTAR Trigger: CCTGGCAGTTGTACTACAGCAAGAAGCTCCTAGACT...CGGTTCCAAAATCCCTTCTGGTGATTTTAGCAGCTGTGATGTTGGTACCTGGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000489724.2 ENST00000647897.1 |
||
| CDS-3UTR GCA 90 bp | TTAGGTTCCCCATACCCAGTCTACTTCTCTATGGCCACTGCTAGGTTTCTCAAGAGTCTAGGAGCTTCTTaGTGTAGTACAACTGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LGSPYPVYFSMATARFLKSLGAS*CSTTAR Trigger: CCTGGCAGTTGTACTACAGCAAGAAGCTCCTAGACT...CTTGAGAAACCTAGCAGTGGCCATAGAGAAGTAGACTGGGTATGGGGAACCTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647897.1 |
||
| CDS-3UTR CCA 90 bp | GGTCTGCACCAGGTACCAACATCACAGCTGCTAAAATCACCAGAAGGGATTTTGGCTGCCATAAATGAGTaGAGCGATGGAAAAGAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: GLHQVPTSQLLKSPEGILAAINE*SDGKES Trigger: GGACTCTTTTCCATCGCTCCACTCATTTATGGCAGC...CAAAATCCCTTCTGGTGATTTTAGCAGCTGTGATGTTGGTACCTGGTGCAGACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000489724.2 ENST00000647897.1 |
||
| CDS-3UTR CCA 90 bp | AGAAGGGATTTTGGAACCGCTGTACTAGTGTCCTTTCATTCGATGGGATGTCCATGTCCTTTCATTCGATaGGATGTCCAGGCTTCACCC | + |
|
Preference number: 4 (lower is better) Translates to: RRDFGTAVLVSFHSMGCPCPFIR*DVQASP Trigger: GGGTGAAGCCTGGACATCCCATCGAATGAAAGGACA...TGGACATCCCATCGAATGAAAGGACACTAGTACAGCGGTTCCAAAATCCCTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000489724.2 ENST00000647897.1 |
||
| CDS-3UTR CCA 90 bp | ACCCATCATCTCCTAGTGTCTAAGGCCACACCTTTCAAGCAACACACCTTTCACCACCAGAAGGGATTTTaGAACCGCTGTACTAGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: THHLLVSKATPFKQHTFHHQKGF*NRCTSV Trigger: GACACTAGTACAGCGGTTCCAAAATCCCTTCTGGTG...GTGAAAGGTGTGTTGCTTGAAAGGTGTGGCCTTAGACACTAGGAGATGATGGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647897.1 |
||
| CDS-3UTR CCA 90 bp | CAGATGTACGTAGATCAGCTTCTTGATTTCATACTTGAGAGTCACACTGTGGGGTCCAGAACTTTGGCCTaGTCTGCACCAGGTACCAAC | + |
|
Preference number: 4 (lower is better) Translates to: QMYVDQLLDFILESHTVGSRTLA*SAPGTN Trigger: GTTGGTACCTGGTGCAGACCAGGCCAAAGTTCTGGA...CCCCACAGTGTGACTCTCAAGTATGAAATCAAGAAGCTGATCTACGTACATCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000489724.2 |
||
| CDS-3UTR CCA 90 bp | GTTCCCCATACCCAGTCTACTTCTCTATGGCCACTGCTAGGTTTCTCAAGGAGCTTGTTTCATAGCTGTTaGTCACCCAGTTCTAGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: VPHTQSTSLWPLLGFSRSLFHSC*SPSSSQ Trigger: TTGGCTAGAACTGGGTGACCAACAGCTATGAAACAA...GCTCCTTGAGAAACCTAGCAGTGGCCATAGAGAAGTAGACTGGGTATGGGGAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647897.1 |
||
| CDS-3UTR TCA 90 bp | ACCTTTCAAGCAACACACCTTTCACACTCTATCAAGCCCCAAACACAAGGCACACCATGCTGCCATAAATaGGTGGAGCGATGGAAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: TFQATHLSHSIKPQTQGTPCCHK*VERWKR Trigger: TCTTTTCCATCGCTCCACTCATTTATGGCAGCATGG...TGTGCCTTGTGTTTGGGGCTTGATAGAGTGTGAAAGGTGTGTTGCTTGAAAGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000647897.1 |
||
| CDS-3UTR CCA 90 bp | GAGAATGACCGAGTAGAGGCAAGGACGAAGCTCATTCTTAAAGAAAAACCTCAATCCAGAACTTTGGCCTaGTCTGCACCAGGTACCAAC | + |
|
Preference number: 4 (lower is better) Translates to: ENDRVEARTKLILKEKPQSRTLA*SAPGTN Trigger: GTTGGTACCTGGTGCAGACCAGGCCAAAGTTCTGGA...TTGAGGTTTTTCTTTAAGAATGAGCTTCGTCCTTGCCTCTACTCGGTCATTCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000489724.2 ENST00000647897.1 |
||
| CDS-3UTR TCA 90 bp | TTAGGTTCCCCATACCCAGTCTACTTCTCTATGGCCACTGCTAGGTTTCTCAAGATGTTTCCTGACCCGTaGCCTAGAGATGAAGTAATT | + |
|
Preference number: 4 (lower is better) Translates to: LGSPYPVYFSMATARFLKMFPDP*PRDEVI Trigger: AATTACTTCATCTCTAGGTCACGGGTCAGGAAACAT...CTTGAGAAACCTAGCAGTGGCCATAGAGAAGTAGACTGGGTATGGGGAACCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647897.1 |
||
| CDS-3UTR GCA 90 bp | GGTCTGCACCAGGTACCAACATCACAGCTGCTAAAATCACCAGAAGGGATTTTGAAGAGGCTTCATTTATaGTTCTTCTCCTGTGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GLHQVPTSQLLKSPEGILKRLHL*FFSCVL Trigger: CAGCACACAGGAGAAGAAGCATAAATGAAGCCTCTT...CAAAATCCCTTCTGGTGATTTTAGCAGCTGTGATGTTGGTACCTGGTGCAGACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000489724.2 ENST00000647897.1 |
||
| CDS-3UTR GCA 90 bp | CCTTTCAAGCAACACACCTTTCACACTCTATCAAGCCCCAAACACAAGGCACAGAAGAGGCTTCATTTATaGTTCTTCTCCTGTGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PFKQHTFHTLSSPKHKAQKRLHL*FFSCVL Trigger: CAGCACACAGGAGAAGAAGCATAAATGAAGCCTCTT...CTGTGCCTTGTGTTTGGGGCTTGATAGAGTGTGAAAGGTGTGTTGCTTGAAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647897.1 |
||
| CDS-3UTR CCA 90 bp | CAGAAGGGATTTTGGAACCGCTGTACTAGTGTCCTTTCATTCGATGGGATGTCCGCCAGACAACTGTACTaGACACTGGGATACAAATTT | + |
|
Preference number: 4 (lower is better) Translates to: QKGFWNRCTSVLSFDGMSARQLY*TLGYKF Trigger: AAATTTGTATCCCAGTGTCCAGTACAGTTGTCTGGC...GGACATCCCATCGAATGAAAGGACACTAGTACAGCGGTTCCAAAATCCCTTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000489724.2 |
||
| CDS-3UTR CCA 90 bp | GAGAATGACCGAGTAGAGGCAAGGACGAAGCTCATTCTTAAAGAAAAACCTCAATGCCACCTCAGCAGATaGCAAAAGGAGCTTTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: ENDRVEARTKLILKEKPQCHLSR*QKELSR Trigger: TCTGGAAAGCTCCTTTTGCCATCTGCTGAGGTGGCA...TTGAGGTTTTTCTTTAAGAATGAGCTTCGTCCTTGCCTCTACTCGGTCATTCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000489724.2 ENST00000647897.1 |
||
| CDS-3UTR CCA 90 bp | GGTCTGCACCAGGTACCAACATCACAGCTGCTAAAATCACCAGAAGGGATTTTGTTGTTTCATAGCTGTTaGTCACCCAGTTCTAGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: GLHQVPTSQLLKSPEGILLFHSC*SPSSSQ Trigger: TTGGCTAGAACTGGGTGACCAACAGCTATGAAACAA...CAAAATCCCTTCTGGTGATTTTAGCAGCTGTGATGTTGGTACCTGGTGCAGACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000489724.2 ENST00000647897.1 |
||
| CDS-3UTR GCA 90 bp | CACCCCAAAGAGGCTTCATTTATGCTTCTTCTCCTGTGTGCTGGTGAACCAAGATTAATTAAAATGCTTTaGAGAGGAGACCACAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: HPKEASFMLLLLCAGEPRLIKML*RGDHSL Trigger: CAGGCTGTGGTCTCCTCTGCAAAGCATTTTAATTAA...TCTTGGTTCACCAGCACACAGGAGAAGAAGCATAAATGAAGCCTCTTTGGGGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000489724.2 |
||
| CDS-3UTR TCA 90 bp | CTGCACCAGGTACCAACATCACAGCTGCTAAAATCACCAGAAGGGATTTTGGAAACTGGGATACAAATTTaGATAAAACAGCCTCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: LHQVPTSQLLKSPEGILETGIQI*IKQPHL Trigger: CAGATGAGGCTGTTTTATTCAAATTTGTATCCCAGT...TTCCAAAATCCCTTCTGGTGATTTTAGCAGCTGTGATGTTGGTACCTGGTGCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000489724.2 |
||
| CDS-3UTR CCA 90 bp | AGAAGGGATTTTGGAACCGCTGTACTAGTGTCCTTTCATTCGATGGGATGTCCAGAGAGATTAAATGTCTaGCCCATAGTTCTTACCAAT | + |
|
Preference number: 4 (lower is better) Translates to: RRDFGTAVLVSFHSMGCPERLNV*PIVLTN Trigger: ATTGGTAAGAACTATGGGCCAGACATTTAATCTCTC...TGGACATCCCATCGAATGAAAGGACACTAGTACAGCGGTTCCAAAATCCCTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647897.1 |
||
| CDS-3UTR GCA 90 bp | GAGAATGACCGAGTAGAGGCAAGGACGAAGCTCATTCTTAAAGAAAAACCTCAATTAATTAAAATGCTTTaGAGAGGAGACCACAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: ENDRVEARTKLILKEKPQLIKML*RGDHSL Trigger: CAGGCTGTGGTCTCCTCTGCAAAGCATTTTAATTAA...TTGAGGTTTTTCTTTAAGAATGAGCTTCGTCCTTGCCTCTACTCGGTCATTCTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000489724.2 ENST00000647897.1 |
||
| CDS-3UTR CCA 90 bp | AATTTGTTTCATAGCTGTTGGTCACCCAGTTCTAGCCAACCAGGAATAAATTATGCTGCCATAAATGAGTaGAGCGATGGAAAAGAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: NLFHSCWSPSSSQPGINYAAINE*SDGKES Trigger: GGACTCTTTTCCATCGCTCCACTCATTTATGGCAGC...ATAATTTATTCCTGGTTGGCTAGAACTGGGTGACCAACAGCTATGAAACAAATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000489724.2 ENST00000647897.1 |
||
| CDS-3UTR CCA 90 bp | TTTCATAGCTGTTGGTCACCCAGTTCTAGCCAACCAGGAATAAATTATAGTTTTCAGTCTACTTCTCTATaGCCACTGCTAGGTTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: FHSCWSPSSSQPGINYSFQSTSL*PLLGFS Trigger: TGAGAAACCTAGCAGTGGCCATAGAGAAGTAGACTG...AAAACTATAATTTATTCCTGGTTGGCTAGAACTGGGTGACCAACAGCTATGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647897.1 |
||
| CDS GCA 90 bp | GTCGGTGCCGGCCGCTCGCGGGCCTGCTCGAGACGCCATTGTGCCTaGCCAGAACCCCCGAACCCCTCACGCGGACCTGGTACCGCAACG | + |
|
Preference number: 5 (lower is better) Translates to: VGAGRSRACSRRHCA*PEPPNPSRGPGTAT Trigger: CGTTGCGGTACCAGGTCCGCGTGAGGGGTTCGGGGGTTCTGGGCAGGCACAATGGCGTCTCGAGCAGGCCCGCGAGCGGCCGGCACCGAC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000489724.2 ENST00000647897.1 |
||
| CDS GCA 90 bp | AGTGCATGGCGACGCGCTCCCGGTGCTGAAAGTCGCTGCCGTCGGTaGCGGCCGCTCGCGGGCCTGCTCGAGACGCCATTGTGCCTGCCC | + |
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Preference number: 5 (lower is better) Translates to: SAWRRAPGAESRCRR*RPLAGLLETPLCLP Trigger: GGGCAGGCACAATGGCGTCTCGAGCAGGCCCGCGAGCGGCCGGCACCGACGGCAGCGACTTTCAGCACCGGGAGCGCGTCGCCATGCACT 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000489724.2 ENST00000647897.1 |
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| CDS GCA 90 bp | ACCTGGTACCGCAACGACACCGCCAAGCGGCCCACTGACCCTATTTaGGCCCCCGCAGCCGCGCGGCTCCGTGAAGAGAACTTCCGGCCC | + |
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Preference number: 5 (lower is better) Translates to: TWYRNDTAKRPTDPI*APAAARLREENFRP Trigger: GGGCCGGAAGTTCTCTTCACGGAGCCGCGCGGCTGCGGGGGCGCAAATAGGGTCAGTGGGCCGCTTGGCGGTGTCGTTGCGGTACCAGGT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000489724.2 |
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| CDS GCA 90 bp | TCATCTGGTAGTGCATGGCGACGCGCTCCCGGTGCTGAAAGTCGCTaGCGTCGGTGCCGGCCGCTCGCGGGCCTGCTCGAGACGCCATTG | + |
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Preference number: 5 (lower is better) Translates to: SSGSAWRRAPGAESR*RRCRPLAGLLETPL Trigger: CAATGGCGTCTCGAGCAGGCCCGCGAGCGGCCGGCACCGACGGCAGCGACTTTCAGCACCGGGAGCGCGTCGCCATGCACTACCAGATGA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000489724.2 ENST00000647897.1 |
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| CDS-3UTR CAA 90 bp | CAGCAGATGGCAAAAGGAGCTTTCCAGAACTTTGGCCTGGTCTGCACCAGGTACCTGCTCGAGACGCCATaGTGCCTGCCCAGAACCCCC | + |
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Preference number: 5 (lower is better) Translates to: QQMAKGAFQNFGLVCTRYLLETP*CLPRTP Trigger: GGGGGTTCTGGGCAGGCACAATGGCGTCTCGAGCAG...GTACCTGGTGCAGACCAGGCCAAAGTTCTGGAAAGCTCCTTTTGCCATCTGCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000489724.2 ENST00000647897.1 |
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| CDS CCA 90 bp | CACTGGGATACAAATTTGAATAAAACAGCCTCATCTGGTAGTGCATaGCGACGCGCTCCCGGTGCTGAAAGTCGCTGCCGTCGGTGCCGG | + |
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Preference number: 5 (lower is better) Translates to: HWDTNLNKTASSGSA*RRAPGAESRCRRCR Trigger: CCGGCACCGACGGCAGCGACTTTCAGCACCGGGAGCGCGTCGCCATGCACTACCAGATGAGGCTGTTTTATTCAAATTTGTATCCCAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000489724.2 |
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| CDS-3UTR CAA 90 bp | TCTGCACCAGGTACCAACATCACAGCTGCTAAAATCACCAGAAGGGATTTTGGACTGCTCGAGACGCCATaGTGCCTGCCCAGAACCCCC | + |
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Preference number: 5 (lower is better) Translates to: SAPGTNITAAKITRRDFGLLETP*CLPRTP Trigger: GGGGGTTCTGGGCAGGCACAATGGCGTCTCGAGCAG...TCCAAAATCCCTTCTGGTGATTTTAGCAGCTGTGATGTTGGTACCTGGTGCAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000489724.2 ENST00000647897.1 |
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| CDS-3UTR CAA 90 bp | AGATGGCAAAAGGAGCTTTCCAGAACTTTGGCCTGGTCTGCACCAGGTACCAACGAGCTTTCCAGAACTTaGGCCTGGTCTGCACCAGGT | + |
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Preference number: 5 (lower is better) Translates to: RWQKELSRTLAWSAPGTNELSRT*AWSAPG Trigger: ACCTGGTGCAGACCAGGCCAAAGTTCTGGAAAGCTC...GTTGGTACCTGGTGCAGACCAGGCCAAAGTTCTGGAAAGCTCCTTTTGCCATCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000489724.2 ENST00000647897.1 |
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| CDS-3UTR CAA 90 bp | GCAACACACCTTTCACACTCTATCAAGCCCCAAACACAAGGCACAGTGTGGGCAGAGCTTTCCAGAACTTaGGCCTGGTCTGCACCAGGT | + |
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Preference number: 5 (lower is better) Translates to: ATHLSHSIKPQTQGTVWAELSRT*AWSAPG Trigger: ACCTGGTGCAGACCAGGCCAAAGTTCTGGAAAGCTC...TGCCCACACTGTGCCTTGTGTTTGGGGCTTGATAGAGTGTGAAAGGTGTGTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647897.1 |
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| CDS-3UTR CAA 90 bp | CTGCACCAGGTACCAACATCACAGCTGCTAAAATCACCAGAAGGGATTTTGGAACTGCCAGGCATGCACTaGCACTGCCAACACCAACAC | + |
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Preference number: 5 (lower is better) Translates to: LHQVPTSQLLKSPEGILELPGMH*HCQHQH Trigger: GTGTTGGTGTTGGCAGTGCAAGTGCATGCCTGGCAG...TTCCAAAATCCCTTCTGGTGATTTTAGCAGCTGTGATGTTGGTACCTGGTGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000489724.2 ENST00000647897.1 |
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| CDS-3UTR CAA 90 bp | CAGCAGATGGCAAAAGGAGCTTTCCAGAACTTTGGCCTGGTCTGCACCAGGTACTTCTTGATTTCATACTaGAGAGTCACACTGTGGGGC | + |
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Preference number: 5 (lower is better) Translates to: QQMAKGAFQNFGLVCTRYFLISY*RVTLWG Trigger: GCCCCACAGTGTGACTCTCAAGTATGAAATCAAGAA...GTACCTGGTGCAGACCAGGCCAAAGTTCTGGAAAGCTCCTTTTGCCATCTGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000489724.2 |
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| CDS-3UTR CAA 90 bp | AATTTGTTTCATAGCTGTTGGTCACCCAGTTCTAGCCAACCAGGAATAAATTATCACTGGGATACAAATTaGAATAAAACAGCCTCATCT | + |
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Preference number: 5 (lower is better) Translates to: NLFHSCWSPSSSQPGINYHWDTN*NKTASS Trigger: AGATGAGGCTGTTTTATTCAAATTTGTATCCCAGTG...ATAATTTATTCCTGGTTGGCTAGAACTGGGTGACCAACAGCTATGAAACAAATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000489724.2 |
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| CDS GCA 72 bp | CGACGCGCTCCCGGTGCTGAAAGTCGCTGCCGTCGGTaGCGGCCGCTCGCGGGCCTGCTCGAGACGCCATTG | + |
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Preference number: 6 (lower is better) Translates to: RRAPGAESRCRR*RPLAGLLETPL Trigger: CAATGGCGTCTCGAGCAGGCCCGCGAGCGGCCGGCACCGACGGCAGCGACTTTCAGCACCGGGAGCGCGTCG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000489724.2 ENST00000647897.1 |
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| CDS CAA 90 bp | CGCTGCCGTCGGTGCCGGCCGCTCGCGGGCCTGCTCGAGACGCCATaGTGCCTGCCCAGAACCCCCGAACCCCTCACGCGGACCTGGTAC | + |
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Preference number: 6 (lower is better) Translates to: RCRRCRPLAGLLETP*CLPRTPEPLTRTWY Trigger: GTACCAGGTCCGCGTGAGGGGTTCGGGGGTTCTGGGCAGGCACAATGGCGTCTCGAGCAGGCCCGCGAGCGGCCGGCACCGACGGCAGCG 73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000489724.2 ENST00000647897.1 |
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| CDS TCA 72 bp | GACCTGGTACCGCAACGACACCGCCAAGCGGCCCACTaGCCCTATTTGCGCCCCCGCAGCCGCGCGGCTCCG | + |
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Preference number: 6 (lower is better) Translates to: DLVPQRHRQAAH*PYLRPRSRAAP Trigger: CGGAGCCGCGCGGCTGCGGGGGCGCAAATAGGGTCAGTGGGCCGCTTGGCGGTGTCGTTGCGGTACCAGGTC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000489724.2 ENST00000647897.1 |
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| CDS GCA 72 bp | GGCCGCTCGCGGGCCTGCTCGAGACGCCATTGTGCCTaGCCAGAACCCCCGAACCCCTCACGCGGACCTGGT | + |
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Preference number: 6 (lower is better) Translates to: GRSRACSRRHCA*PEPPNPSRGPG Trigger: ACCAGGTCCGCGTGAGGGGTTCGGGGGTTCTGGGCAGGCACAATGGCGTCTCGAGCAGGCCCGCGAGCGGCC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000489724.2 ENST00000647897.1 |
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| CDS GCA 72 bp | AAAGTCGCTGCCGTCGGTGCCGGCCGCTCGCGGGCCTaGTCGAGACGCCATTGTGCCTGCCCAGAACCCCCG | + |
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Preference number: 6 (lower is better) Translates to: KVAAVGAGRSRA*SRRHCACPEPP Trigger: CGGGGGTTCTGGGCAGGCACAATGGCGTCTCGAGCAGGCCCGCGAGCGGCCGGCACCGACGGCAGCGACTTT 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000489724.2 ENST00000647897.1 |
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| CDS GCA 72 bp | CGCAACGACACCGCCAAGCGGCCCACTGACCCTATTTaGGCCCCCGCAGCCGCGCGGCTCCGTGAAGAGAAC | + |
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Preference number: 6 (lower is better) Translates to: RNDTAKRPTDPI*APAAARLREEN Trigger: GTTCTCTTCACGGAGCCGCGCGGCTGCGGGGGCGCAAATAGGGTCAGTGGGCCGCTTGGCGGTGTCGTTGCG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000489724.2 |
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| CDS CCA 72 bp | TGCCTGCCCAGAACCCCCGAACCCCTCACGCGGACCTaGTACCGCAACGACACCGCCAAGCGGCCCACTGAC | + |
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Preference number: 6 (lower is better) Translates to: CLPRTPEPLTRT*YRNDTAKRPTD Trigger: GTCAGTGGGCCGCTTGGCGGTGTCGTTGCGGTACCAGGTCCGCGTGAGGGGTTCGGGGGTTCTGGGCAGGCA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000489724.2 ENST00000647897.1 |
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| CDS CCA 72 bp | ACAAATTTGAATAAAACAGCCTCATCTGGTAGTGCATaGCGACGCGCTCCCGGTGCTGAAAGTCGCTGCCGT | + |
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Preference number: 6 (lower is better) Translates to: TNLNKTASSGSA*RRAPGAESRCR Trigger: ACGGCAGCGACTTTCAGCACCGGGAGCGCGTCGCCATGCACTACCAGATGAGGCTGTTTTATTCAAATTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000489724.2 |
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| CDS CAA 90 bp | ACCAACTATATGCCAGACAACTGTACTGGACACTGGGATACAAATTaGAATAAAACAGCCTCATCTGGTAGTGCATGGCGACGCGCTCCC | + |
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Preference number: 6 (lower is better) Translates to: TNYMPDNCTGHWDTN*NKTASSGSAWRRAP Trigger: GGGAGCGCGTCGCCATGCACTACCAGATGAGGCTGTTTTATTCAAATTTGTATCCCAGTGTCCAGTACAGTTGTCTGGCATATAGTTGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000489724.2 |
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| CDS TCA 72 bp | TGCCAGACAACTGTACTGGACACTGGGATACAAATTTaGATAAAACAGCCTCATCTGGTAGTGCATGGCGAC | + |
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Preference number: 6 (lower is better) Translates to: CQTTVLDTGIQI*IKQPHLVVHGD Trigger: GTCGCCATGCACTACCAGATGAGGCTGTTTTATTCAAATTTGTATCCCAGTGTCCAGTACAGTTGTCTGGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000489724.2 |
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| CDS CAA 72 bp | ATGCCAGACAACTGTACTGGACACTGGGATACAAATTaGAATAAAACAGCCTCATCTGGTAGTGCATGGCGA | + |
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Preference number: 6 (lower is better) Translates to: MPDNCTGHWDTN*NKTASSGSAWR Trigger: TCGCCATGCACTACCAGATGAGGCTGTTTTATTCAAATTTGTATCCCAGTGTCCAGTACAGTTGTCTGGCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000489724.2 |
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| CDS CCA 72 bp | ACCACCAACTATATGCCAGACAACTGTACTGGACACTaGGATACAAATTTGAATAAAACAGCCTCATCTGGT | + |
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Preference number: 6 (lower is better) Translates to: TTNYMPDNCTGH*DTNLNKTASSG Trigger: ACCAGATGAGGCTGTTTTATTCAAATTTGTATCCCAGTGTCCAGTACAGTTGTCTGGCATATAGTTGGTGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000489724.2 |
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| CDS GCA 72 bp | GAAGTATCTTTCAAATTTTTCTTACCACCAACTATATaGCAGACAACTGTACTGGACACTGGGATACAAATT | + |
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Preference number: 6 (lower is better) Translates to: EVSFKFFLPPTI*QTTVLDTGIQI Trigger: AATTTGTATCCCAGTGTCCAGTACAGTTGTCTGGCATATAGTTGGTGGTAAGAAAAATTTGAAAGATACTTC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000489724.2 |
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