RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for JAG2 (Homo sapiens)

Ensembl gene IDs: ENSG00000184916

Ensembl transcript IDs: ENST00000331782.8, ENST00000347004.2, ENST00000546616.1, ENST00000553051.1, ENST00000553244.1

Found 642 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ACAGCCACCACAGCCACGTGGGCCAATACCCAGCACGCGCCCCACTaGCCCAAGCCTCTCTGCCGGCGTGGCTCTCCCCCAACCTCACTC +
Preference number: 1 (lower is better)
Translates to: TATTATWANTQHAPH*PKPLCRRGSPPTSL
Trigger: GAGTGAGGTTGGGGGAGAGCCACGCCGGCAGAGAGGCTTGGGGCAGTGGGGCGCGTGCTGGGTATTGGCCCACGTGGCTGTGGTGGCTGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
3UTR GCA 90 bp CCTTGGGCCACGCCGATGACCTCAGGCCCCACTAACAACCACAGGTaGGTCAACAGCCACGGGCCGTGCCGGCAGCCAGGGCCACATCAA +
Preference number: 1 (lower is better)
Translates to: PWATPMTSGPTNNHR*VNSHGPCRQPGPHQ
Trigger: TTGATGTGGCCCTGGCTGCCGGCACGGCCCGTGGCTGTTGACGCACCTGTGGTTGTTAGTGGGGCCTGAGGTCATCGGCGTGGCCCAAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
3UTR GCA 90 bp CAGACGGCAGGCAGGGTGGACTGGCCAGCAAGCGCGAGGTTGACCTaGCAGCCTTGGGCCACGCCGATGACCTCAGGCCCCACTAACAAC +
Preference number: 1 (lower is better)
Translates to: QTAGRVDWPASARLT*QPWATPMTSGPTNN
Trigger: GTTGTTAGTGGGGCCTGAGGTCATCGGCGTGGCCCAAGGCTGGCAGGTCAACCTCGCGCTTGCTGGCCAGTCCACCCTGCCTGCCGTCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
3UTR CCA 90 bp GGCAGGGTGGACTGGCCAGCAAGCGCGAGGTTGACCTGCCAGCCTTaGGCCACGCCGATGACCTCAGGCCCCACTAACAACCACAGGTGC +
Preference number: 1 (lower is better)
Translates to: GRVDWPASARLTCQP*ATPMTSGPTNNHRC
Trigger: GCACCTGTGGTTGTTAGTGGGGCCTGAGGTCATCGGCGTGGCCCAAGGCTGGCAGGTCAACCTCGCGCTTGCTGGCCAGTCCACCCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
3UTR CCA 90 bp CGACTCAACAGAACCGTCTCGCCCTCTACAGCCACCACAGCCACGTaGGCCAATACCCAGCACGCGCCCCACTGCCCCAAGCCTCTCTGC +
Preference number: 1 (lower is better)
Translates to: RLNRTVSPSTATTAT*ANTQHAPHCPKPLC
Trigger: GCAGAGAGGCTTGGGGCAGTGGGGCGCGTGCTGGGTATTGGCCCACGTGGCTGTGGTGGCTGTAGAGGGCGAGACGGTTCTGTTGAGTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
3UTR CCA 90 bp ACAGCCACAGGCCACACCATCAGCCACGGGTCCCACCAACAGCCATaGGCCACACCAACACAGCCATGGGTCTCACCGGCACTTTGGCCT +
Preference number: 1 (lower is better)
Translates to: TATGHTISHGSHQQP*ATPTQPWVSPALWP
Trigger: AGGCCAAAGTGCCGGTGAGACCCATGGCTGTGTTGGTGTGGCCCATGGCTGTTGGTGGGACCCGTGGCTGATGGTGTGGCCTGTGGCTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
3UTR CCA 90 bp TGCGCAGCAGGAAGGGCACTTCTGAAAGCACAGTGGAGAGATCGCTaGAGCGGGCGTTCTGGGCAGGAGGAAGCACAGACGGCAGGCAGG +
Preference number: 1 (lower is better)
Translates to: CAAGRALLKAQWRDR*SGRSGQEEAQTAGR
Trigger: CCTGCCTGCCGTCTGTGCTTCCTCCTGCCCAGAACGCCCGCTCCAGCGATCTCTCCACTGTGCTTTCAGAAGTGCCCTTCCTGCTGCGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
3UTR CCA 90 bp CAAACCTGCATCCACCACCTTGGCATGCCAACGCATTCGAGGCCCTaGCAGGCCCCGACTCAACAGAACCGTCTCGCCCTCTACAGCCAC +
Preference number: 1 (lower is better)
Translates to: QTCIHHLGMPTHSRP*QAPTQQNRLALYSH
Trigger: GTGGCTGTAGAGGGCGAGACGGTTCTGTTGAGTCGGGGCCTGCCAGGGCCTCGAATGCGTTGGCATGCCAAGGTGGTGGATGCAGGTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
3UTR CCA 90 bp GGATGGGAGAACTGCGCAGCAGGAAGGGCACTTCTGAAAGCACAGTaGAGAGATCGCTGGAGCGGGCGTTCTGGGCAGGAGGAAGCACAG +
Preference number: 1 (lower is better)
Translates to: GWENCAAGRALLKAQ*RDRWSGRSGQEEAQ
Trigger: CTGTGCTTCCTCCTGCCCAGAACGCCCGCTCCAGCGATCTCTCCACTGTGCTTTCAGAAGTGCCCTTCCTGCTGCGCAGTTCTCCCATCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
3UTR GCA 90 bp GTTGCGAGGGGTCTGTGTGAAGGCACTTGTCACGAGCTTCAATACTaGCGCCGTCCCAGGATGGGAGAACTGCGCAGCAGGAAGGGCACT +
Preference number: 1 (lower is better)
Translates to: VARGLCEGTCHELQY*RRPRMGELRSRKGT
Trigger: AGTGCCCTTCCTGCTGCGCAGTTCTCCCATCCTGGGACGGCGGCAGTATTGAAGCTCGTGACAAGTGCCTTCACACAGACCCCTCGCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
3UTR GCA 90 bp ATTCCCAGGAAGGTTTTGGCCAAACCTGCATCCACCACCTTGGCATaGCAACGCATTCGAGGCCCTGGCAGGCCCCGACTCAACAGAACC +
Preference number: 1 (lower is better)
Translates to: IPRKVLAKPASTTLA*QRIRGPGRPRLNRT
Trigger: GGTTCTGTTGAGTCGGGGCCTGCCAGGGCCTCGAATGCGTTGGCATGCCAAGGTGGTGGATGCAGGTTTGGCCAAAACCTTCCTGGGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
3UTR GCA 90 bp CTTGTCACGAGCTTCAATACTGCCGCCGTCCCAGGATGGGAGAACTaGGCAGCAGGAAGGGCACTTCTGAAAGCACAGTGGAGAGATCGC +
Preference number: 1 (lower is better)
Translates to: LVTSFNTAAVPGWEN*AAGRALLKAQWRDR
Trigger: GCGATCTCTCCACTGTGCTTTCAGAAGTGCCCTTCCTGCTGCGCAGTTCTCCCATCCTGGGACGGCGGCAGTATTGAAGCTCGTGACAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
3UTR CCA 90 bp GTGAAGGCACTTGTCACGAGCTTCAATACTGCCGCCGTCCCAGGATaGGAGAACTGCGCAGCAGGAAGGGCACTTCTGAAAGCACAGTGG +
Preference number: 1 (lower is better)
Translates to: VKALVTSFNTAAVPG*ENCAAGRALLKAQW
Trigger: CCACTGTGCTTTCAGAAGTGCCCTTCCTGCTGCGCAGTTCTCCCATCCTGGGACGGCGGCAGTATTGAAGCTCGTGACAAGTGCCTTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
3UTR CCA 90 bp ATGGGCCACACCAACACAGCCATGGGTCTCACCGGCACTTTGGCCTaGAGCCACAGAGAAACCCGAGTGAGGAATAAAAGGAAGATTCTG +
Preference number: 1 (lower is better)
Translates to: MGHTNTAMGLTGTLA*SHRETRVRNKRKIL
Trigger: CAGAATCTTCCTTTTATTCCTCACTCGGGTTTCTCTGTGGCTCCAGGCCAAAGTGCCGGTGAGACCCATGGCTGTGTTGGTGTGGCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
3UTR TCA 90 bp TGGGTCTCACCGGCACTTTGGCCTGGAGCCACAGAGAAACCCGAGTaGGGAATAAAAGGAAGATTCTGTAAACAGTGCACAACCTCTGGT +
Preference number: 1 (lower is better)
Translates to: WVSPALWPGATEKPE*GIKGRFCKQCTTSG
Trigger: ACCAGAGGTTGTGCACTGTTTACAGAATCTTCCTTTTATTCCTCACTCGGGTTTCTCTGTGGCTCCAGGCCAAAGTGCCGGTGAGACCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
3UTR TCA 90 bp TCTGTAAACAGTGCACAACCTCTGGTAACAAACGCTACGATTTGGTaGCGACGCAGACACCCTTTGCTCTCTCCTTTCATACAGCGAGTG +
Preference number: 1 (lower is better)
Translates to: SVNSAQPLVTNATIW*RRRHPLLSPFIQRV
Trigger: CACTCGCTGTATGAAAGGAGAGAGCAAAGGGTGTCTGCGTCGTCACCAAATCGTAGCGTTTGTTACCAGAGGTTGTGCACTGTTTACAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
3UTR GCA 90 bp GGTGACGACGCAGACACCCTTTGCTCTCTCCTTTCATACAGCGAGTaGCACGCACGGAAACTTTACAAAAATAGCAACTATCCGAGAATA +
Preference number: 1 (lower is better)
Translates to: GDDADTLCSLLSYSE*HARKLYKNSNYPRI
Trigger: TATTCTCGGATAGTTGCTATTTTTGTAAAGTTTCCGTGCGTGGCACTCGCTGTATGAAAGGAGAGAGCAAAGGGTGTCTGCGTCGTCACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
3UTR CAA 90 bp GAAGCACAGACGGCAGGCAGGGTGGACTGGCCAGCAAGCGCGAGGTaGACCTGCCAGCCTTGGGCCACGCCGATGACCTCAGGCCCCACT +
Preference number: 2 (lower is better)
Translates to: EAQTAGRVDWPASAR*TCQPWATPMTSGPT
Trigger: AGTGGGGCCTGAGGTCATCGGCGTGGCCCAAGGCTGGCAGGTCAACCTCGCGCTTGCTGGCCAGTCCACCCTGCCTGCCGTCTGTGCTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
3UTR-3UTR TCA 90 bp GGTGGGCAGCGCCTGGTGCCACGGCACGCGTGGACAGTTGCGAGGGGTCTGTGTCTTGGGCCACGCCGATaGCCTCAGGCCCCACTAACA +
Preference number: 2 (lower is better)
Translates to: GGQRLVPRHAWTVARGLCLGPRR*PQAPLT
Trigger: TGTTAGTGGGGCCTGAGGTCATCGGCGTGGCCCAAG...ACACAGACCCCTCGCAACTGTCCACGCGTGCCGTGGCACCAGGCGCTGCCCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
3UTR-3UTR GCA 90 bp TCGAGGCCCTGGCAGGCCCCGACTCAACAGAACCGTCTCGCCCTCTACAGCCACAACAGCCACGGGCCGTaGCGGCAGCCAGGGCCACAT +
Preference number: 2 (lower is better)
Translates to: SRPWQAPTQQNRLALYSHNSHGP*RQPGPH
Trigger: ATGTGGCCCTGGCTGCCGGCACGGCCCGTGGCTGTT...GTGGCTGTAGAGGGCGAGACGGTTCTGTTGAGTCGGGGCCTGCCAGGGCCTCGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
3UTR-3UTR CCA 90 bp AATACTGCCGCCGTCCCAGGATGGGAGAACTGCGCAGCAGGAAGGGCACTTCTGTCCCACCGAGGGCCCTaGGTCCCGGCCCAGCTGGCA +
Preference number: 2 (lower is better)
Translates to: NTAAVPGWENCAAGRALLSHRGP*VPAQLA
Trigger: TGCCAGCTGGGCCGGGACCCAGGGCCCTCGGTGGGA...CAGAAGTGCCCTTCCTGCTGCGCAGTTCTCCCATCCTGGGACGGCGGCAGTATT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
3UTR-3UTR GCA 90 bp CACATCACTGACAGGCGGCTCGGAGTCAGCCTTGGAGTCGGCCTTCCATGCCCAAGCGCGAGGTTGACCTaGCAGCCTTGGGCCACGCCG +
Preference number: 2 (lower is better)
Translates to: HITDRRLGVSLGVGLPCPSARLT*QPWATP
Trigger: CGGCGTGGCCCAAGGCTGGCAGGTCAACCTCGCGCT...TGGGCATGGAAGGCCGACTCCAAGGCTGACTCCGAGCCGCCTGTCAGTGATGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
3UTR-3UTR GCA 90 bp GGTGGGCAGCGCCTGGTGCCACGGCACGCGTGGACAGTTGCGAGGGGTCTGTGTCACGAGCTTCAATACTaGCGCCGTCCCAGGATGGGA +
Preference number: 2 (lower is better)
Translates to: GGQRLVPRHAWTVARGLCHELQY*RRPRMG
Trigger: TCCCATCCTGGGACGGCGGCAGTATTGAAGCTCGTG...ACACAGACCCCTCGCAACTGTCCACGCGTGCCGTGGCACCAGGCGCTGCCCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
3UTR-3UTR CCA 90 bp CCACTGCCCCAAGCCTCTCTGCCGGCGTGGCTCTCCCCCAACCTCACTCTCAATGCAGGCAGGGTGGACTaGCCAGCAAGCGCGAGGTTG +
Preference number: 2 (lower is better)
Translates to: PLPQASLPAWLSPNLTLNAGRVD*PASARL
Trigger: CAACCTCGCGCTTGCTGGCCAGTCCACCCTGCCTGC...ATTGAGAGTGAGGTTGGGGGAGAGCCACGCCGGCAGAGAGGCTTGGGGCAGTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
3UTR CAA 90 bp GGCCGGCAGGTGGGCAGCGCCTGGTGCCACGGCACGCGTGGACAGTaGCGAGGGGTCTGTGTGAAGGCACTTGTCACGAGCTTCAATACT +
Preference number: 2 (lower is better)
Translates to: GRQVGSAWCHGTRGQ*RGVCVKALVTSFNT
Trigger: AGTATTGAAGCTCGTGACAAGTGCCTTCACACAGACCCCTCGCAACTGTCCACGCGTGCCGTGGCACCAGGCGCTGCCCACCTGCCGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
3UTR-3UTR GCA 90 bp AATACTGCCGCCGTCCCAGGATGGGAGAACTGCGCAGCAGGAAGGGCACTTCTGAACAGCCACGGGCCGTaGCGGCAGCCAGGGCCACAT +
Preference number: 2 (lower is better)
Translates to: NTAAVPGWENCAAGRALLNSHGP*RQPGPH
Trigger: ATGTGGCCCTGGCTGCCGGCACGGCCCGTGGCTGTT...CAGAAGTGCCCTTCCTGCTGCGCAGTTCTCCCATCCTGGGACGGCGGCAGTATT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
3UTR-3UTR GCA 90 bp GCCGGCGTGGCTCTCCCCCAACCTCACTCTCAATACAAAAGGGACAGCACCGAAAGCGCGAGGTTGACCTaGCAGCCTTGGGCCACGCCG +
Preference number: 2 (lower is better)
Translates to: AGVALPQPHSQYKRDSTESARLT*QPWATP
Trigger: CGGCGTGGCCCAAGGCTGGCAGGTCAACCTCGCGCT...TTCGGTGCTGTCCCTTTTGTATTGAGAGTGAGGTTGGGGGAGAGCCACGCCGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
3UTR-3UTR CCA 90 bp CAGCAGGGTAAAGACTTGCACATCACTGACAGGCGGCTCGGAGTCAGCCTTGGAGTCCGGCAGACGGCATaGCTCCCACCGAGGGCCCTG +
Preference number: 2 (lower is better)
Translates to: QQGKDLHITDRRLGVSLGVRQTA*LPPRAL
Trigger: CAGGGCCCTCGGTGGGAGCCATGCCGTCTGCCGGAC...TCCAAGGCTGACTCCGAGCCGCCTGTCAGTGATGTGCAAGTCTTTACCCTGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
3UTR-3UTR CCA 90 bp TTGGCCAAACCTGCATCCACCACCTTGGCATGCCAACGCATTCGAGGCCCTGGCGTGCCACGGCACGCGTaGACAGTTGCGAGGGGTCTG +
Preference number: 2 (lower is better)
Translates to: LAKPASTTLACQRIRGPGVPRHA*TVARGL
Trigger: CAGACCCCTCGCAACTGTCCACGCGTGCCGTGGCAC...GCCAGGGCCTCGAATGCGTTGGCATGCCAAGGTGGTGGATGCAGGTTTGGCCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
3UTR-3UTR CCA 90 bp TTGCACATCACTGACAGGCGGCTCGGAGTCAGCCTTGGAGTCGGCCTTCCATGCGCCTCTCTGCCGGCGTaGCTCTCCCCCAACCTCACT +
Preference number: 2 (lower is better)
Translates to: LHITDRRLGVSLGVGLPCASLPA*LSPNLT
Trigger: AGTGAGGTTGGGGGAGAGCCACGCCGGCAGAGAGGC...GCATGGAAGGCCGACTCCAAGGCTGACTCCGAGCCGCCTGTCAGTGATGTGCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
3UTR-3UTR GCA 90 bp GAAGGTTTTGGCCAAACCTGCATCCACCACCTTGGCATGCCAACGCATTCGAGGCAGCACGCGCCCCACTaGCCCAAGCCTCTCTGCCGG +
Preference number: 2 (lower is better)
Translates to: EGFGQTCIHHLGMPTHSRQHAPH*PKPLCR
Trigger: CCGGCAGAGAGGCTTGGGGCAGTGGGGCGCGTGCTG...CCTCGAATGCGTTGGCATGCCAAGGTGGTGGATGCAGGTTTGGCCAAAACCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
3UTR-3UTR CCA 90 bp GATTTGGTGACGACGCAGACACCCTTTGCTCTCTCCTTTCATACAGCGAGTGCCTCCCACCGAGGGCCCTaGGTCCCGGCCCAGCTGGCA +
Preference number: 2 (lower is better)
Translates to: DLVTTQTPFALSFHTASASHRGP*VPAQLA
Trigger: TGCCAGCTGGGCCGGGACCCAGGGCCCTCGGTGGGA...GGCACTCGCTGTATGAAAGGAGAGAGCAAAGGGTGTCTGCGTCGTCACCAAATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
3UTR-3UTR CCA 90 bp TTGCACATCACTGACAGGCGGCTCGGAGTCAGCCTTGGAGTCGGCCTTCCATGCCTGGAGCGGGCGTTCTaGGCAGGAGGAAGCACAGAC +
Preference number: 2 (lower is better)
Translates to: LHITDRRLGVSLGVGLPCLERAF*AGGSTD
Trigger: GTCTGTGCTTCCTCCTGCCCAGAACGCCCGCTCCAG...GCATGGAAGGCCGACTCCAAGGCTGACTCCGAGCCGCCTGTCAGTGATGTGCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
3UTR-3UTR CCA 90 bp AATACTGCCGCCGTCCCAGGATGGGAGAACTGCGCAGCAGGAAGGGCACTTCTGCAGTGGAGAGATCGCTaGAGCGGGCGTTCTGGGCAG +
Preference number: 2 (lower is better)
Translates to: NTAAVPGWENCAAGRALLQWRDR*SGRSGQ
Trigger: CTGCCCAGAACGCCCGCTCCAGCGATCTCTCCACTG...CAGAAGTGCCCTTCCTGCTGCGCAGTTCTCCCATCCTGGGACGGCGGCAGTATT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
3UTR-3UTR TCA 90 bp GCCGGCGTGGCTCTCCCCCAACCTCACTCTCAATACAAAAGGGACAGCACCGAAAGCCACAGGTCCCATTaGCAGCCACGAGTCCCACCG +
Preference number: 2 (lower is better)
Translates to: AGVALPQPHSQYKRDSTESHRSH*QPRVPP
Trigger: CGGTGGGACTCGTGGCTGTCAATGGGACCTGTGGCT...TTCGGTGCTGTCCCTTTTGTATTGAGAGTGAGGTTGGGGGAGAGCCACGCCGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
3UTR-3UTR TCA 90 bp GTTTTGGCCAAACCTGCATCCACCACCTTGGCATGCCAACGCATTCGAGGCCCTCAGCAAGCGCGAGGTTaGCCTGCCAGCCTTGGGCCA +
Preference number: 2 (lower is better)
Translates to: VLAKPASTTLACQRIRGPQQARG*PASLGP
Trigger: TGGCCCAAGGCTGGCAGGTCAACCTCGCGCTTGCTG...AGGGCCTCGAATGCGTTGGCATGCCAAGGTGGTGGATGCAGGTTTGGCCAAAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
3UTR-3UTR GCA 90 bp CACATCACTGACAGGCGGCTCGGAGTCAGCCTTGGAGTCGGCCTTCCATGCCCATCCACCACCTTGGCATaGCAACGCATTCGAGGCCCT +
Preference number: 2 (lower is better)
Translates to: HITDRRLGVSLGVGLPCPSTTLA*QRIRGP
Trigger: AGGGCCTCGAATGCGTTGGCATGCCAAGGTGGTGGA...TGGGCATGGAAGGCCGACTCCAAGGCTGACTCCGAGCCGCCTGTCAGTGATGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
3UTR-3UTR CCA 90 bp CCACTGCCCCAAGCCTCTCTGCCGGCGTGGCTCTCCCCCAACCTCACTCTCAATACACCAACACAGCCATaGGTCTCACCGGCACTTTGG +
Preference number: 2 (lower is better)
Translates to: PLPQASLPAWLSPNLTLNTPTQP*VSPALW
Trigger: CCAAAGTGCCGGTGAGACCCATGGCTGTGTTGGTGT...ATTGAGAGTGAGGTTGGGGGAGAGCCACGCCGGCAGAGAGGCTTGGGGCAGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
3UTR-3UTR CCA 90 bp AGCAGGGTAAAGACTTGCACATCACTGACAGGCGGCTCGGAGTCAGCCTTGGAGGCCGCCGTCCCAGGATaGGAGAACTGCGCAGCAGGA +
Preference number: 2 (lower is better)
Translates to: SRVKTCTSLTGGSESALEAAVPG*ENCAAG
Trigger: TCCTGCTGCGCAGTTCTCCCATCCTGGGACGGCGGC...CTCCAAGGCTGACTCCGAGCCGCCTGTCAGTGATGTGCAAGTCTTTACCCTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
3UTR-3UTR TCA 90 bp AACTGCGCAGCAGGAAGGGCACTTCTGAAAGCACAGTGGAGAGATCGCTGGAGCAGCCACAGGTCCCATTaGCAGCCACGAGTCCCACCG +
Preference number: 2 (lower is better)
Translates to: NCAAGRALLKAQWRDRWSSHRSH*QPRVPP
Trigger: CGGTGGGACTCGTGGCTGTCAATGGGACCTGTGGCT...GCTCCAGCGATCTCTCCACTGTGCTTTCAGAAGTGCCCTTCCTGCTGCGCAGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
3UTR-3UTR GCA 90 bp AATACTGCCGCCGTCCCAGGATGGGAGAACTGCGCAGCAGGAAGGGCACTTCTGACTAACAACCACAGGTaGGTCAACAGCCACGGGCCG +
Preference number: 2 (lower is better)
Translates to: NTAAVPGWENCAAGRALLTNNHR*VNSHGP
Trigger: CGGCCCGTGGCTGTTGACGCACCTGTGGTTGTTAGT...CAGAAGTGCCCTTCCTGCTGCGCAGTTCTCCCATCCTGGGACGGCGGCAGTATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
3UTR-3UTR CCA 90 bp CACATCACTGACAGGCGGCTCGGAGTCAGCCTTGGAGTCGGCCTTCCATGCCCAACACCAACACAGCCATaGGTCTCACCGGCACTTTGG +
Preference number: 2 (lower is better)
Translates to: HITDRRLGVSLGVGLPCPTPTQP*VSPALW
Trigger: CCAAAGTGCCGGTGAGACCCATGGCTGTGTTGGTGT...TGGGCATGGAAGGCCGACTCCAAGGCTGACTCCGAGCCGCCTGTCAGTGATGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
3UTR-3UTR CCA 90 bp GAAGGTTTTGGCCAAACCTGCATCCACCACCTTGGCATGCCAACGCATTCGAGGGTGCCACGGCACGCGTaGACAGTTGCGAGGGGTCTG +
Preference number: 2 (lower is better)
Translates to: EGFGQTCIHHLGMPTHSRVPRHA*TVARGL
Trigger: CAGACCCCTCGCAACTGTCCACGCGTGCCGTGGCAC...CCTCGAATGCGTTGGCATGCCAAGGTGGTGGATGCAGGTTTGGCCAAAACCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
3UTR-3UTR TCA 90 bp ACGCCGATGACCTCAGGCCCCACTAACAACCACAGGTGCGTCAACAGCCACGGGAACGCTACGATTTGGTaGCGACGCAGACACCCTTTG +
Preference number: 2 (lower is better)
Translates to: TPMTSGPTNNHRCVNSHGNATIW*RRRHPL
Trigger: CAAAGGGTGTCTGCGTCGTCACCAAATCGTAGCGTT...CCCGTGGCTGTTGACGCACCTGTGGTTGTTAGTGGGGCCTGAGGTCATCGGCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
3UTR-3UTR CCA 90 bp ACCTCACTCTCAATACAAAAGGGACAGCACCGAAAGAACAAGGGAGGCCGGAATGTCCGGCAGACGGCATaGCTCCCACCGAGGGCCCTG +
Preference number: 2 (lower is better)
Translates to: TSLSIQKGQHRKNKGGRNVRQTA*LPPRAL
Trigger: CAGGGCCCTCGGTGGGAGCCATGCCGTCTGCCGGAC...ATTCCGGCCTCCCTTGTTCTTTCGGTGCTGTCCCTTTTGTATTGAGAGTGAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
3UTR-3UTR CCA 90 bp TTGGCCAAACCTGCATCCACCACCTTGGCATGCCAACGCATTCGAGGCCCTGGCGTCTCACCGGCACTTTaGCCTGGAGCCACAGAGAAA +
Preference number: 2 (lower is better)
Translates to: LAKPASTTLACQRIRGPGVSPAL*PGATEK
Trigger: TTTCTCTGTGGCTCCAGGCCAAAGTGCCGGTGAGAC...GCCAGGGCCTCGAATGCGTTGGCATGCCAAGGTGGTGGATGCAGGTTTGGCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
3UTR CAA 90 bp TCCTTGACTCAGTTGACCTCCTACCCCTCACAGCAGGGTAAAGACTaGCACATCACTGACAGGCGGCTCGGAGTCAGCCTTGGAGTCGGC +
Preference number: 2 (lower is better)
Translates to: SLTQLTSYPSQQGKD*HITDRRLGVSLGVG
Trigger: GCCGACTCCAAGGCTGACTCCGAGCCGCCTGTCAGTGATGTGCAAGTCTTTACCCTGCTGTGAGGGGTAGGAGGTCAACTGAGTCAAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
3UTR-3UTR TCA 90 bp TTGGCCAAACCTGCATCCACCACCTTGGCATGCCAACGCATTCGAGGCCCTGGCCAGGAAGGGCACTTCTaGAAGCACAGTGGAGAGATC +
Preference number: 2 (lower is better)
Translates to: LAKPASTTLACQRIRGPGQEGHF*KHSGEI
Trigger: GATCTCTCCACTGTGCTTTCAGAAGTGCCCTTCCTG...GCCAGGGCCTCGAATGCGTTGGCATGCCAAGGTGGTGGATGCAGGTTTGGCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
3UTR-3UTR TCA 90 bp CAGCAGGGTAAAGACTTGCACATCACTGACAGGCGGCTCGGAGTCAGCCTTGGATGCGAGGGGTCTGTGTaGAGGCACTTGTCACGAGCT +
Preference number: 2 (lower is better)
Translates to: QQGKDLHITDRRLGVSLGCEGSV*RHLSRA
Trigger: AGCTCGTGACAAGTGCCTTCACACAGACCCCTCGCA...TCCAAGGCTGACTCCGAGCCGCCTGTCAGTGATGTGCAAGTCTTTACCCTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
3UTR-3UTR GCA 90 bp TCGAGGCCCTGGCAGGCCCCGACTCAACAGAACCGTCTCGCCCTCTACAGCCACAAAATAAAGAAACTATaGACATGGCCTCGGCCTCCG +
Preference number: 2 (lower is better)
Translates to: SRPWQAPTQQNRLALYSHKIKKL*TWPRPP
Trigger: CGGAGGCCGAGGCCATGTGCATAGTTTCTTTATTTT...GTGGCTGTAGAGGGCGAGACGGTTCTGTTGAGTCGGGGCCTGCCAGGGCCTCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
3UTR-3UTR CCA 90 bp GTTGCGAGGGGTCTGTGTGAAGGCACTTGTCACGAGCTTCAATACTGCCGCCGTACCGGCACTTTGGCCTaGAGCCACAGAGAAACCCGA +
Preference number: 2 (lower is better)
Translates to: VARGLCEGTCHELQYCRRTGTLA*SHRETR
Trigger: TCGGGTTTCTCTGTGGCTCCAGGCCAAAGTGCCGGT...ACGGCGGCAGTATTGAAGCTCGTGACAAGTGCCTTCACACAGACCCCTCGCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
3UTR-3UTR CCA 90 bp AACTGCGCAGCAGGAAGGGCACTTCTGAAAGCACAGTGGAGAGATCGCTGGAGCACCGGCACTTTGGCCTaGAGCCACAGAGAAACCCGA +
Preference number: 2 (lower is better)
Translates to: NCAAGRALLKAQWRDRWSTGTLA*SHRETR
Trigger: TCGGGTTTCTCTGTGGCTCCAGGCCAAAGTGCCGGT...GCTCCAGCGATCTCTCCACTGTGCTTTCAGAAGTGCCCTTCCTGCTGCGCAGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
3UTR-3UTR CCA 90 bp GAAGGTTTTGGCCAAACCTGCATCCACCACCTTGGCATGCCAACGCATTCGAGGTTGACCTGCCAGCCTTaGGCCACGCCGATGACCTCA +
Preference number: 2 (lower is better)
Translates to: EGFGQTCIHHLGMPTHSRLTCQP*ATPMTS
Trigger: TGAGGTCATCGGCGTGGCCCAAGGCTGGCAGGTCAA...CCTCGAATGCGTTGGCATGCCAAGGTGGTGGATGCAGGTTTGGCCAAAACCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
3UTR CAA 90 bp ACAGCCATGGGCCACACCAACACAGCCATGGGTCTCACCGGCACTTaGGCCTGGAGCCACAGAGAAACCCGAGTGAGGAATAAAAGGAAG +
Preference number: 2 (lower is better)
Translates to: TAMGHTNTAMGLTGT*AWSHRETRVRNKRK
Trigger: CTTCCTTTTATTCCTCACTCGGGTTTCTCTGTGGCTCCAGGCCAAAGTGCCGGTGAGACCCATGGCTGTGTTGGTGTGGCCCATGGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
3UTR-3UTR GCA 90 bp GAAGGTTTTGGCCAAACCTGCATCCACCACCTTGGCATGCCAACGCATTCGAGGACTAACAACCACAGGTaGGTCAACAGCCACGGGCCG +
Preference number: 2 (lower is better)
Translates to: EGFGQTCIHHLGMPTHSRTNNHR*VNSHGP
Trigger: CGGCCCGTGGCTGTTGACGCACCTGTGGTTGTTAGT...CCTCGAATGCGTTGGCATGCCAAGGTGGTGGATGCAGGTTTGGCCAAAACCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
3UTR-3UTR CCA 90 bp AAGGTTTTGGCCAAACCTGCATCCACCACCTTGGCATGCCAACGCATTCGAGGCAAGAAACTATGCACATaGCCTCGGCCTCCGGGTCCG +
Preference number: 2 (lower is better)
Translates to: KVLAKPASTTLACQRIRGKKLCT*PRPPGP
Trigger: CGGACCCGGAGGCCGAGGCCATGTGCATAGTTTCTT...GCCTCGAATGCGTTGGCATGCCAAGGTGGTGGATGCAGGTTTGGCCAAAACCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
3UTR-3UTR CCA 90 bp ACCTCCTACCCCTCACAGCAGGGTAAAGACTTGCACATCACTGACAGGCGGCTCGTCTCACCGGCACTTTaGCCTGGAGCCACAGAGAAA +
Preference number: 2 (lower is better)
Translates to: TSYPSQQGKDLHITDRRLVSPAL*PGATEK
Trigger: TTTCTCTGTGGCTCCAGGCCAAAGTGCCGGTGAGAC...GAGCCGCCTGTCAGTGATGTGCAAGTCTTTACCCTGCTGTGAGGGGTAGGAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
3UTR-3UTR CCA 90 bp CAACCTCACTCTCAATACAAAAGGGACAGCACCGAAAGAACAAGGGAGGCCGGACAGTGGAGAGATCGCTaGAGCGGGCGTTCTGGGCAG +
Preference number: 2 (lower is better)
Translates to: QPHSQYKRDSTERTREAGQWRDR*SGRSGQ
Trigger: CTGCCCAGAACGCCCGCTCCAGCGATCTCTCCACTG...TCCGGCCTCCCTTGTTCTTTCGGTGCTGTCCCTTTTGTATTGAGAGTGAGGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
3UTR-3UTR CCA 90 bp ACCTCCTACCCCTCACAGCAGGGTAAAGACTTGCACATCACTGACAGGCGGCTCCTTCTGAAAGCACAGTaGAGAGATCGCTGGAGCGGG +
Preference number: 2 (lower is better)
Translates to: TSYPSQQGKDLHITDRRLLLKAQ*RDRWSG
Trigger: CCCGCTCCAGCGATCTCTCCACTGTGCTTTCAGAAG...GAGCCGCCTGTCAGTGATGTGCAAGTCTTTACCCTGCTGTGAGGGGTAGGAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
3UTR-3UTR TCA 90 bp ACCTCCTACCCCTCACAGCAGGGTAAAGACTTGCACATCACTGACAGGCGGCTCCAGGAAGGGCACTTCTaGAAGCACAGTGGAGAGATC +
Preference number: 2 (lower is better)
Translates to: TSYPSQQGKDLHITDRRLQEGHF*KHSGEI
Trigger: GATCTCTCCACTGTGCTTTCAGAAGTGCCCTTCCTG...GAGCCGCCTGTCAGTGATGTGCAAGTCTTTACCCTGCTGTGAGGGGTAGGAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
3UTR-3UTR GCA 90 bp ACGCCGATGACCTCAGGCCCCACTAACAACCACAGGTGCGTCAACAGCCACGGGAAAATAAAGAAACTATaGACATGGCCTCGGCCTCCG +
Preference number: 2 (lower is better)
Translates to: TPMTSGPTNNHRCVNSHGKIKKL*TWPRPP
Trigger: CGGAGGCCGAGGCCATGTGCATAGTTTCTTTATTTT...CCCGTGGCTGTTGACGCACCTGTGGTTGTTAGTGGGGCCTGAGGTCATCGGCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
3UTR-3UTR GCA 90 bp TTGCACATCACTGACAGGCGGCTCGGAGTCAGCCTTGGAGTCGGCCTTCCATGCCTTTCATACAGCGAGTaGCACGCACGGAAACTTTAC +
Preference number: 2 (lower is better)
Translates to: LHITDRRLGVSLGVGLPCLSYSE*HARKLY
Trigger: GTAAAGTTTCCGTGCGTGGCACTCGCTGTATGAAAG...GCATGGAAGGCCGACTCCAAGGCTGACTCCGAGCCGCCTGTCAGTGATGTGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
3UTR-3UTR GCA 90 bp ACCCCTCACAGCAGGGTAAAGACTTGCACATCACTGACAGGCGGCTCGGAGTCAGGTTTTGGCCAAACCTaGATCCACCACCTTGGCATG +
Preference number: 2 (lower is better)
Translates to: TPHSRVKTCTSLTGGSESGFGQT*IHHLGM
Trigger: CATGCCAAGGTGGTGGATGCAGGTTTGGCCAAAACC...TGACTCCGAGCCGCCTGTCAGTGATGTGCAAGTCTTTACCCTGCTGTGAGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
3UTR-3UTR GCA 90 bp CAACCTCACTCTCAATACAAAAGGGACAGCACCGAAAGAACAAGGGAGGCCGGACACGAGCTTCAATACTaGCGCCGTCCCAGGATGGGA +
Preference number: 2 (lower is better)
Translates to: QPHSQYKRDSTERTREAGHELQY*RRPRMG
Trigger: TCCCATCCTGGGACGGCGGCAGTATTGAAGCTCGTG...TCCGGCCTCCCTTGTTCTTTCGGTGCTGTCCCTTTTGTATTGAGAGTGAGGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
3UTR-3UTR GCA 90 bp ACCCCTCACAGCAGGGTAAAGACTTGCACATCACTGACAGGCGGCTCGGAGTCACTTTCATACAGCGAGTaGCACGCACGGAAACTTTAC +
Preference number: 2 (lower is better)
Translates to: TPHSRVKTCTSLTGGSESLSYSE*HARKLY
Trigger: GTAAAGTTTCCGTGCGTGGCACTCGCTGTATGAAAG...TGACTCCGAGCCGCCTGTCAGTGATGTGCAAGTCTTTACCCTGCTGTGAGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
3UTR-3UTR GCA 90 bp CCACTGCCCCAAGCCTCTCTGCCGGCGTGGCTCTCCCCCAACCTCACTCTCAATAGATTCTGTAAACAGTaGACAACCTCTGGTAACAAA +
Preference number: 2 (lower is better)
Translates to: PLPQASLPAWLSPNLTLNRFCKQ*TTSGNK
Trigger: TTTGTTACCAGAGGTTGTGCACTGTTTACAGAATCT...ATTGAGAGTGAGGTTGGGGGAGAGCCACGCCGGCAGAGAGGCTTGGGGCAGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
3UTR-3UTR CCA 90 bp ACCTCACTCTCAATACAAAAGGGACAGCACCGAAAGAACAAGGGAGGCCGGAATCTTCTGAAAGCACAGTaGAGAGATCGCTGGAGCGGG +
Preference number: 2 (lower is better)
Translates to: TSLSIQKGQHRKNKGGRNLLKAQ*RDRWSG
Trigger: CCCGCTCCAGCGATCTCTCCACTGTGCTTTCAGAAG...ATTCCGGCCTCCCTTGTTCTTTCGGTGCTGTCCCTTTTGTATTGAGAGTGAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
3UTR-3UTR CCA 90 bp GCCGGCGTGGCTCTCCCCCAACCTCACTCTCAATACAAAAGGGACAGCACCGAAGGGAGGCCGGAATGGTaGCATTATTCAATCAAATAT +
Preference number: 2 (lower is better)
Translates to: AGVALPQPHSQYKRDSTEGRPEW*HYSIKY
Trigger: ATATTTGATTGAATAATGCCACCATTCCGGCCTCCC...TTCGGTGCTGTCCCTTTTGTATTGAGAGTGAGGTTGGGGGAGAGCCACGCCGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
3UTR-3UTR CCA 90 bp ACCCCTCACAGCAGGGTAAAGACTTGCACATCACTGACAGGCGGCTCGGAGTCAGGGAGGCCGGAATGGTaGCATTATTCAATCAAATAT +
Preference number: 2 (lower is better)
Translates to: TPHSRVKTCTSLTGGSESGRPEW*HYSIKY
Trigger: ATATTTGATTGAATAATGCCACCATTCCGGCCTCCC...TGACTCCGAGCCGCCTGTCAGTGATGTGCAAGTCTTTACCCTGCTGTGAGGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
3UTR-3UTR TCA 90 bp AGCAGGGTAAAGACTTGCACATCACTGACAGGCGGCTCGGAGTCAGCCTTGGAGAATTCCTTAAGACCTTaGTACGTATTCGTGGGTAAG +
Preference number: 2 (lower is better)
Translates to: SRVKTCTSLTGGSESALENSLRP*YVFVGK
Trigger: CTTACCCACGAATACGTATCAAGGTCTTAAGGAATT...CTCCAAGGCTGACTCCGAGCCGCCTGTCAGTGATGTGCAAGTCTTTACCCTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
3UTR CAA 90 bp AGATTCTGTAAACAGTGCACAACCTCTGGTAACAAACGCTACGATTaGGTGACGACGCAGACACCCTTTGCTCTCTCCTTTCATACAGCG +
Preference number: 2 (lower is better)
Translates to: RFCKQCTTSGNKRYD*VTTQTPFALSFHTA
Trigger: CGCTGTATGAAAGGAGAGAGCAAAGGGTGTCTGCGTCGTCACCAAATCGTAGCGTTTGTTACCAGAGGTTGTGCACTGTTTACAGAATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
3UTR CCA 72 bp GCACATGGCCTCGGCCTCCGGGTCCGGCAGACGGCATaGCTCCCACCGAGGGCCCTGGGTCCCGGCCCAGCT +
Preference number: 3 (lower is better)
Translates to: AHGLGLRVRQTA*LPPRALGPGPA
Trigger: AGCTGGGCCGGGACCCAGGGCCCTCGGTGGGAGCCATGCCGTCTGCCGGACCCGGAGGCCGAGGCCATGTGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
3UTR GCA 72 bp GGCAGGGTGGACTGGCCAGCAAGCGCGAGGTTGACCTaGCAGCCTTGGGCCACGCCGATGACCTCAGGCCCC +
Preference number: 3 (lower is better)
Translates to: GRVDWPASARLT*QPWATPMTSGP
Trigger: GGGGCCTGAGGTCATCGGCGTGGCCCAAGGCTGGCAGGTCAACCTCGCGCTTGCTGGCCAGTCCACCCTGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
3UTR GCA 72 bp ACAGCCACGTGGGCCAATACCCAGCACGCGCCCCACTaGCCCAAGCCTCTCTGCCGGCGTGGCTCTCCCCCA +
Preference number: 3 (lower is better)
Translates to: TATWANTQHAPH*PKPLCRRGSPP
Trigger: TGGGGGAGAGCCACGCCGGCAGAGAGGCTTGGGGCAGTGGGGCGCGTGCTGGGTATTGGCCCACGTGGCTGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
3UTR-3UTR CAA 90 bp GGTGGGCAGCGCCTGGTGCCACGGCACGCGTGGACAGTTGCGAGGGGTCTGTGTCCAGCAAGCGCGAGGTaGACCTGCCAGCCTTGGGCC +
Preference number: 3 (lower is better)
Translates to: GGQRLVPRHAWTVARGLCPASAR*TCQPWA
Trigger: GGCCCAAGGCTGGCAGGTCAACCTCGCGCTTGCTGG...ACACAGACCCCTCGCAACTGTCCACGCGTGCCGTGGCACCAGGCGCTGCCCACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
3UTR GCA 72 bp ACGCCGATGACCTCAGGCCCCACTAACAACCACAGGTaGGTCAACAGCCACGGGCCGTGCCGGCAGCCAGGG +
Preference number: 3 (lower is better)
Translates to: TPMTSGPTNNHR*VNSHGPCRQPG
Trigger: CCCTGGCTGCCGGCACGGCCCGTGGCTGTTGACGCACCTGTGGTTGTTAGTGGGGCCTGAGGTCATCGGCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
3UTR-3UTR CAA 90 bp GGTGGGCAGCGCCTGGTGCCACGGCACGCGTGGACAGTTGCGAGGGGTCTGTGTGGTCTCACCGGCACTTaGGCCTGGAGCCACAGAGAA +
Preference number: 3 (lower is better)
Translates to: GGQRLVPRHAWTVARGLCGLTGT*AWSHRE
Trigger: TTCTCTGTGGCTCCAGGCCAAAGTGCCGGTGAGACC...ACACAGACCCCTCGCAACTGTCCACGCGTGCCGTGGCACCAGGCGCTGCCCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
3UTR-3UTR CAA 90 bp TCGAGGCCCTGGCAGGCCCCGACTCAACAGAACCGTCTCGCCCTCTACAGCCACGTTGACCTGCCAGCCTaGGGCCACGCCGATGACCTC +
Preference number: 3 (lower is better)
Translates to: SRPWQAPTQQNRLALYSHVDLPA*GHADDL
Trigger: GAGGTCATCGGCGTGGCCCAAGGCTGGCAGGTCAAC...GTGGCTGTAGAGGGCGAGACGGTTCTGTTGAGTCGGGGCCTGCCAGGGCCTCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
3UTR CCA 72 bp AGAACCGTCTCGCCCTCTACAGCCACCACAGCCACGTaGGCCAATACCCAGCACGCGCCCCACTGCCCCAAG +
Preference number: 3 (lower is better)
Translates to: RTVSPSTATTAT*ANTQHAPHCPK
Trigger: CTTGGGGCAGTGGGGCGCGTGCTGGGTATTGGCCCACGTGGCTGTGGTGGCTGTAGAGGGCGAGACGGTTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
3UTR CCA 72 bp GACTGGCCAGCAAGCGCGAGGTTGACCTGCCAGCCTTaGGCCACGCCGATGACCTCAGGCCCCACTAACAAC +
Preference number: 3 (lower is better)
Translates to: DWPASARLTCQP*ATPMTSGPTNN
Trigger: GTTGTTAGTGGGGCCTGAGGTCATCGGCGTGGCCCAAGGCTGGCAGGTCAACCTCGCGCTTGCTGGCCAGTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
3UTR-3UTR CAA 90 bp CACATCACTGACAGGCGGCTCGGAGTCAGCCTTGGAGTCGGCCTTCCATGCCCAGTTGACCTGCCAGCCTaGGGCCACGCCGATGACCTC +
Preference number: 3 (lower is better)
Translates to: HITDRRLGVSLGVGLPCPVDLPA*GHADDL
Trigger: GAGGTCATCGGCGTGGCCCAAGGCTGGCAGGTCAAC...TGGGCATGGAAGGCCGACTCCAAGGCTGACTCCGAGCCGCCTGTCAGTGATGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
3UTR GCA 72 bp GGAGTCGGCCTTCCATGCCCAGCCCTGAGGCCACCATaGCACGTTCCAGTTGGCTCAAGCAGTGAGGGGCAA +
Preference number: 3 (lower is better)
Translates to: GVGLPCPALRPP*HVPVGSSSEGQ
Trigger: TTGCCCCTCACTGCTTGAGCCAACTGGAACGTGGCATGGTGGCCTCAGGGCTGGGCATGGAAGGCCGACTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
3UTR CCA 72 bp ATCCACCACCTTGGCATGCCAACGCATTCGAGGCCCTaGCAGGCCCCGACTCAACAGAACCGTCTCGCCCTC +
Preference number: 3 (lower is better)
Translates to: IHHLGMPTHSRP*QAPTQQNRLAL
Trigger: GAGGGCGAGACGGTTCTGTTGAGTCGGGGCCTGCCAGGGCCTCGAATGCGTTGGCATGCCAAGGTGGTGGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
3UTR-3UTR CAA 90 bp ACCTCCTACCCCTCACAGCAGGGTAAAGACTTGCACATCACTGACAGGCGGCTCCCAGCAAGCGCGAGGTaGACCTGCCAGCCTTGGGCC +
Preference number: 3 (lower is better)
Translates to: TSYPSQQGKDLHITDRRLPASAR*TCQPWA
Trigger: GGCCCAAGGCTGGCAGGTCAACCTCGCGCTTGCTGG...GAGCCGCCTGTCAGTGATGTGCAAGTCTTTACCCTGCTGTGAGGGGTAGGAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
3UTR CCA 72 bp CCAGGAAGGTTTTGGCCAAACCTGCATCCACCACCTTaGCATGCCAACGCATTCGAGGCCCTGGCAGGCCCC +
Preference number: 3 (lower is better)
Translates to: PGRFWPNLHPPP*HANAFEALAGP
Trigger: GGGGCCTGCCAGGGCCTCGAATGCGTTGGCATGCCAAGGTGGTGGATGCAGGTTTGGCCAAAACCTTCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
3UTR-3UTR CAA 90 bp TGCGCAGCAGGAAGGGCACTTCTGAAAGCACAGTGGAGAGATCGCTGGAGCGGGGGTCTCACCGGCACTTaGGCCTGGAGCCACAGAGAA +
Preference number: 3 (lower is better)
Translates to: CAAGRALLKAQWRDRWSGGLTGT*AWSHRE
Trigger: TTCTCTGTGGCTCCAGGCCAAAGTGCCGGTGAGACC...CCCGCTCCAGCGATCTCTCCACTGTGCTTTCAGAAGTGCCCTTCCTGCTGCGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
3UTR CCA 72 bp GGAAGGGCACTTCTGAAAGCACAGTGGAGAGATCGCTaGAGCGGGCGTTCTGGGCAGGAGGAAGCACAGACG +
Preference number: 3 (lower is better)
Translates to: GRALLKAQWRDR*SGRSGQEEAQT
Trigger: CGTCTGTGCTTCCTCCTGCCCAGAACGCCCGCTCCAGCGATCTCTCCACTGTGCTTTCAGAAGTGCCCTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
3UTR CCA 72 bp AACTGCGCAGCAGGAAGGGCACTTCTGAAAGCACAGTaGAGAGATCGCTGGAGCGGGCGTTCTGGGCAGGAG +
Preference number: 3 (lower is better)
Translates to: NCAAGRALLKAQ*RDRWSGRSGQE
Trigger: CTCCTGCCCAGAACGCCCGCTCCAGCGATCTCTCCACTGTGCTTTCAGAAGTGCCCTTCCTGCTGCGCAGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
3UTR GCA 72 bp GGTCTGTGTGAAGGCACTTGTCACGAGCTTCAATACTaGCGCCGTCCCAGGATGGGAGAACTGCGCAGCAGG +
Preference number: 3 (lower is better)
Translates to: GLCEGTCHELQY*RRPRMGELRSR
Trigger: CCTGCTGCGCAGTTCTCCCATCCTGGGACGGCGGCAGTATTGAAGCTCGTGACAAGTGCCTTCACACAGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
3UTR-3UTR CAA 90 bp ACGCCGATGACCTCAGGCCCCACTAACAACCACAGGTGCGTCAACAGCCACGGGCGACGCAGACACCCTTaGCTCTCTCCTTTCATACAG +
Preference number: 3 (lower is better)
Translates to: TPMTSGPTNNHRCVNSHGRRRHP*LSPFIQ
Trigger: CTGTATGAAAGGAGAGAGCAAAGGGTGTCTGCGTCG...CCCGTGGCTGTTGACGCACCTGTGGTTGTTAGTGGGGCCTGAGGTCATCGGCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
3UTR-3UTR CAA 90 bp TTGCACATCACTGACAGGCGGCTCGGAGTCAGCCTTGGAGTCGGCCTTCCATGCAACAAACGCTACGATTaGGTGACGACGCAGACACCC +
Preference number: 3 (lower is better)
Translates to: LHITDRRLGVSLGVGLPCNKRYD*VTTQTP
Trigger: GGGTGTCTGCGTCGTCACCAAATCGTAGCGTTTGTT...GCATGGAAGGCCGACTCCAAGGCTGACTCCGAGCCGCCTGTCAGTGATGTGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
3UTR CCA 72 bp CTTGTCACGAGCTTCAATACTGCCGCCGTCCCAGGATaGGAGAACTGCGCAGCAGGAAGGGCACTTCTGAAA +
Preference number: 3 (lower is better)
Translates to: LVTSFNTAAVPG*ENCAAGRALLK
Trigger: TTTCAGAAGTGCCCTTCCTGCTGCGCAGTTCTCCCATCCTGGGACGGCGGCAGTATTGAAGCTCGTGACAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
3UTR GCA 72 bp CAAACGCTACGATTTGGTGACGACGCAGACACCCTTTaGTCTCTCCTTTCATACAGCGAGTGCCACGCACGG +
Preference number: 3 (lower is better)
Translates to: QTLRFGDDADTL*SLLSYSECHAR
Trigger: CCGTGCGTGGCACTCGCTGTATGAAAGGAGAGAGCAAAGGGTGTCTGCGTCGTCACCAAATCGTAGCGTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
3UTR CCA 72 bp ACCAACACAGCCATGGGTCTCACCGGCACTTTGGCCTaGAGCCACAGAGAAACCCGAGTGAGGAATAAAAGG +
Preference number: 3 (lower is better)
Translates to: TNTAMGLTGTLA*SHRETRVRNKR
Trigger: CCTTTTATTCCTCACTCGGGTTTCTCTGTGGCTCCAGGCCAAAGTGCCGGTGAGACCCATGGCTGTGTTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
3UTR-3UTR CAA 90 bp AAGGTTTTGGCCAAACCTGCATCCACCACCTTGGCATGCCAACGCATTCGAGGCAACAAACGCTACGATTaGGTGACGACGCAGACACCC +
Preference number: 3 (lower is better)
Translates to: KVLAKPASTTLACQRIRGNKRYD*VTTQTP
Trigger: GGGTGTCTGCGTCGTCACCAAATCGTAGCGTTTGTT...GCCTCGAATGCGTTGGCATGCCAAGGTGGTGGATGCAGGTTTGGCCAAAACCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
3UTR TCA 72 bp AGTGCACAACCTCTGGTAACAAACGCTACGATTTGGTaGCGACGCAGACACCCTTTGCTCTCTCCTTTCATA +
Preference number: 3 (lower is better)
Translates to: SAQPLVTNATIW*RRRHPLLSPFI
Trigger: TATGAAAGGAGAGAGCAAAGGGTGTCTGCGTCGTCACCAAATCGTAGCGTTTGTTACCAGAGGTTGTGCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
3UTR CCA 72 bp GGGACAGCACCGAAAGAACAAGGGAGGCCGGAATGGTaGCATTATTCAATCAAATATACAGAGTGCTTCCTT +
Preference number: 3 (lower is better)
Translates to: GTAPKEQGRPEW*HYSIKYTECFL
Trigger: AAGGAAGCACTCTGTATATTTGATTGAATAATGCCACCATTCCGGCCTCCCTTGTTCTTTCGGTGCTGTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
3UTR GCA 72 bp GCAGACACCCTTTGCTCTCTCCTTTCATACAGCGAGTaGCACGCACGGAAACTTTACAAAAATAGCAACTAT +
Preference number: 3 (lower is better)
Translates to: ADTLCSLLSYSE*HARKLYKNSNY
Trigger: ATAGTTGCTATTTTTGTAAAGTTTCCGTGCGTGGCACTCGCTGTATGAAAGGAGAGAGCAAAGGGTGTCTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp CTCGGCCTCCGGGTCCGGCAGACGGCATGGCTCCCACCGAGGGCCCTGGGTCCCCGCCGGAGGCTGCTGTaGCAGGCATCCCAGGCCCCG +
Preference number: 4 (lower is better)
Translates to: LGLRVRQTAWLPPRALGPRRRLL*QASQAP
Trigger: CGGGGCCTGGGATGCCTGGCACAGCAGCCTCCGGCG...GGGACCCAGGGCCCTCGGTGGGAGCCATGCCGTCTGCCGGACCCGGAGGCCGAG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp GGGGCCGGCAGGTGGGCAGCGCCTGGTGCCACGGCACGCGTGGACAGTTGCGAGCGCCGTGGCCGTAGCTaGAGGGCCCCGTGGGCGTCA +
Preference number: 4 (lower is better)
Translates to: GAGRWAAPGATARVDSCERRGRS*RAPWAS
Trigger: TGACGCCCACGGGGCCCTGCAGCTACGGCCACGGCG...CTCGCAACTGTCCACGCGTGCCGTGGCACCAGGCGCTGCCCACCTGCCGGCCCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp GGGGCCGGCAGGTGGGCAGCGCCTGGTGCCACGGCACGCGTGGACAGTTGCGAGCGCCGGAGGCTGCTGTaGCAGGCATCCCAGGCCCCG +
Preference number: 4 (lower is better)
Translates to: GAGRWAAPGATARVDSCERRRLL*QASQAP
Trigger: CGGGGCCTGGGATGCCTGGCACAGCAGCCTCCGGCG...CTCGCAACTGTCCACGCGTGCCGTGGCACCAGGCGCTGCCCACCTGCCGGCCCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp CCTCGGCCTCCGGGTCCGGCAGACGGCATGGCTCCCACCGAGGGCCCTGGGTCCGTGGGCAGCGCCTGGTaGCACGGCACGCGTGGACAG +
Preference number: 4 (lower is better)
Translates to: PRPPGPADGMAPTEGPGSVGSAW*HGTRGQ
Trigger: CTGTCCACGCGTGCCGTGGCACCAGGCGCTGCCCAC...GGACCCAGGGCCCTCGGTGGGAGCCATGCCGTCTGCCGGACCCGGAGGCCGAGG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp CTCGGCCTCCGGGTCCGGCAGACGGCATGGCTCCCACCGAGGGCCCTGGGTCCCCAGCAGGCGGTCCCGTaGCACAGCCCTTGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: LGLRVRQTAWLPPRALGPQQAVP*HSPCGW
Trigger: CCAGCCACAAGGGCTGTGGCACGGGACCGCCTGCTG...GGGACCCAGGGCCCTCGGTGGGAGCCATGCCGTCTGCCGGACCCGGAGGCCGAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp GGGGCCGGCAGGTGGGCAGCGCCTGGTGCCACGGCACGCGTGGACAGTTGCGAGCAGCACGCGCCCCACTaGCCCAAGCCTCTCTGCCGG +
Preference number: 4 (lower is better)
Translates to: GAGRWAAPGATARVDSCEQHAPH*PKPLCR
Trigger: CCGGCAGAGAGGCTTGGGGCAGTGGGGCGCGTGCTG...CTCGCAACTGTCCACGCGTGCCGTGGCACCAGGCGCTGCCCACCTGCCGGCCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp CCTCGGCCTCCGGGTCCGGCAGACGGCATGGCTCCCACCGAGGGCCCTGGGTCCCTGACGCAGCGTCCATaGGGGCCACACACGCCGGAG +
Preference number: 4 (lower is better)
Translates to: PRPPGPADGMAPTEGPGSLTQRP*GPHTPE
Trigger: CTCCGGCGTGTGTGGCCCCCATGGACGCTGCGTCAG...GGACCCAGGGCCCTCGGTGGGAGCCATGCCGTCTGCCGGACCCGGAGGCCGAGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp CCTCGGCCTCCGGGTCCGGCAGACGGCATGGCTCCCACCGAGGGCCCTGGGTCCGCAGGTAGAAGGAGTTaGCGCCCAGCACGGGCGTGG +
Preference number: 4 (lower is better)
Translates to: PRPPGPADGMAPTEGPGSAGRRS*RPARAW
Trigger: CCACGCCCGTGCTGGGCGGCAACTCCTTCTACCTGC...GGACCCAGGGCCCTCGGTGGGAGCCATGCCGTCTGCCGGACCCGGAGGCCGAGG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp CTCGGCCTCCGGGTCCGGCAGACGGCATGGCTCCCACCGAGGGCCCTGGGTCCCAGCCGTAGCTGCACCTaGACTCCCCAGGCACGGTGC +
Preference number: 4 (lower is better)
Translates to: LGLRVRQTAWLPPRALGPSRSCT*TPQARC
Trigger: GCACCGTGCCTGGGGAGTGCAGGTGCAGCTACGGCT...GGGACCCAGGGCCCTCGGTGGGAGCCATGCCGTCTGCCGGACCCGGAGGCCGAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp CCTCGGCCTCCGGGTCCGGCAGACGGCATGGCTCCCACCGAGGGCCCTGGGTCCAGCCATCGATCACTCTaGAGGCCCCGCCAGGGCACG +
Preference number: 4 (lower is better)
Translates to: PRPPGPADGMAPTEGPGSSHRSL*RPRQGT
Trigger: CGTGCCCTGGCGGGGCCTGCAGAGTGATCGATGGCT...GGACCCAGGGCCCTCGGTGGGAGCCATGCCGTCTGCCGGACCCGGAGGCCGAGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp CTCGGCCTCCGGGTCCGGCAGACGGCATGGCTCCCACCGAGGGCCCTGGGTCCCAGCCATCGATCACTCTaGAGGCCCCGCCAGGGCACG +
Preference number: 4 (lower is better)
Translates to: LGLRVRQTAWLPPRALGPSHRSL*RPRQGT
Trigger: CGTGCCCTGGCGGGGCCTGCAGAGTGATCGATGGCT...GGGACCCAGGGCCCTCGGTGGGAGCCATGCCGTCTGCCGGACCCGGAGGCCGAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp CCTCGGCCTCCGGGTCCGGCAGACGGCATGGCTCCCACCGAGGGCCCTGGGTCCGGAGTCGGCCTTCCATaGCCAGCCCTGAGGCCACCA +
Preference number: 4 (lower is better)
Translates to: PRPPGPADGMAPTEGPGSGVGLP*PALRPP
Trigger: TGGTGGCCTCAGGGCTGGGCATGGAAGGCCGACTCC...GGACCCAGGGCCCTCGGTGGGAGCCATGCCGTCTGCCGGACCCGGAGGCCGAGG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp GGGGCCGGCAGGTGGGCAGCGCCTGGTGCCACGGCACGCGTGGACAGTTGCGAGAGCTGCAGGGCCCCGTaGGCGTCACCTTGGCCTGGT +
Preference number: 4 (lower is better)
Translates to: GAGRWAAPGATARVDSCESCRAP*ASPWPG
Trigger: ACCAGGCCAAGGTGACGCCCACGGGGCCCTGCAGCT...CTCGCAACTGTCCACGCGTGCCGTGGCACCAGGCGCTGCCCACCTGCCGGCCCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp CTCGGCCTCCGGGTCCGGCAGACGGCATGGCTCCCACCGAGGGCCCTGGGTCCCCAGCCCGATGGGCAGTaGCATTCGAAGCCGGACGGC +
Preference number: 4 (lower is better)
Translates to: LGLRVRQTAWLPPRALGPQPDGQ*HSKPDG
Trigger: GCCGTCCGGCTTCGAATGCCACTGCCCATCGGGCTG...GGGACCCAGGGCCCTCGGTGGGAGCCATGCCGTCTGCCGGACCCGGAGGCCGAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp CTCGGCCTCCGGGTCCGGCAGACGGCATGGCTCCCACCGAGGGCCCTGGGTCCCCCCGCTCCAGCCCGATaGGCAGTGGCATTCGAAGCC +
Preference number: 4 (lower is better)
Translates to: LGLRVRQTAWLPPRALGPPAPAR*AVAFEA
Trigger: GGCTTCGAATGCCACTGCCCATCGGGCTGGAGCGGG...GGGACCCAGGGCCCTCGGTGGGAGCCATGCCGTCTGCCGGACCCGGAGGCCGAG
73% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp CCTCGGCCTCCGGGTCCGGCAGACGGCATGGCTCCCACCGAGGGCCCTGGGTCCCCAGGAGCTTCCGTGTaGGAACGGAGTGCCCCGGGA +
Preference number: 4 (lower is better)
Translates to: PRPPGPADGMAPTEGPGSPGASV*ERSAPG
Trigger: TCCCGGGGCACTCCGTTCCCACACGGAAGCTCCTGG...GGACCCAGGGCCCTCGGTGGGAGCCATGCCGTCTGCCGGACCCGGAGGCCGAGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp GGGGCCGGCAGGTGGGCAGCGCCTGGTGCCACGGCACGCGTGGACAGTTGCGAGCGCGGCCAGGCGAACTaGAAGGGGATGACGACGAGG +
Preference number: 4 (lower is better)
Translates to: GAGRWAAPGATARVDSCERGQAN*KGMTTR
Trigger: CCTCGTCGTCATCCCCTTCCAGTTCGCCTGGCCGCG...CTCGCAACTGTCCACGCGTGCCGTGGCACCAGGCGCTGCCCACCTGCCGGCCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp GGTGGGCAGCGCCTGGTGCCACGGCACGCGTGGACAGTTGCGAGGGGTCTGTGTGCGGCCACGATGGCGTaGGCCGCGCCCTGGATCAGG +
Preference number: 4 (lower is better)
Translates to: GGQRLVPRHAWTVARGLCAATMA*AAPWIR
Trigger: CCTGATCCAGGGCGCGGCCCACGCCATCGTGGCCGC...ACACAGACCCCTCGCAACTGTCCACGCGTGCCGTGGCACCAGGCGCTGCCCACC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp GGGGCCGGCAGGTGGGCAGCGCCTGGTGCCACGGCACGCGTGGACAGTTGCGAGGAGCTGTTCCCCCGCTaGGTGATGGCGGCCACGATG +
Preference number: 4 (lower is better)
Translates to: GAGRWAAPGATARVDSCEELFPR*VMAATM
Trigger: CATCGTGGCCGCCATCACCCAGCGGGGGAACAGCTC...CTCGCAACTGTCCACGCGTGCCGTGGCACCAGGCGCTGCCCACCTGCCGGCCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp CCTCGGCCTCCGGGTCCGGCAGACGGCATGGCTCCCACCGAGGGCCCTGGGTCCCTGGAGCGGGCGTTCTaGGCAGGAGGAAGCACAGAC +
Preference number: 4 (lower is better)
Translates to: PRPPGPADGMAPTEGPGSLERAF*AGGSTD
Trigger: GTCTGTGCTTCCTCCTGCCCAGAACGCCCGCTCCAG...GGACCCAGGGCCCTCGGTGGGAGCCATGCCGTCTGCCGGACCCGGAGGCCGAGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR TCA 90 bp CTCGGCCTCCGGGTCCGGCAGACGGCATGGCTCCCACCGAGGGCCCTGGGTCCCGCACTGGAACTCGCGTaGGTGGCAGGTCTTGCCCTT +
Preference number: 4 (lower is better)
Translates to: LGLRVRQTAWLPPRALGPALELA*VAGLAL
Trigger: AAGGGCAAGACCTGCCACTCACGCGAGTTCCAGTGC...GGGACCCAGGGCCCTCGGTGGGAGCCATGCCGTCTGCCGGACCCGGAGGCCGAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp CGCCCTCTACAGCCACCACAGCCACGTGGGCCAATACCCAGCACGCGCCCCACTATGGGCCGCGCCGCCTaGACCCAGAGCGCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: RPLQPPQPRGPIPSTRPTMGRAA*TQSASS
Trigger: GCTGCTGGCGCTCTGGGTGCAGGCGGCGCGGCCCAT...AGTGGGGCGCGTGCTGGGTATTGGCCCACGTGGCTGTGGTGGCTGTAGAGGGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp GGGGCCGGCAGGTGGGCAGCGCCTGGTGCCACGGCACGCGTGGACAGTTGCGAGAGGGCTCCACACAACTaGCATGCACGCAGCCGGGGT +
Preference number: 4 (lower is better)
Translates to: GAGRWAAPGATARVDSCERAPHN*HARSRG
Trigger: ACCCCGGCTGCGTGCATGGCAGTTGTGTGGAGCCCT...CTCGCAACTGTCCACGCGTGCCGTGGCACCAGGCGCTGCCCACCTGCCGGCCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp GGGGCCGGCAGGTGGGCAGCGCCTGGTGCCACGGCACGCGTGGACAGTTGCGAGAAGTTGCCCCCTGGCTaGCTGACGCAGCGTCCATGG +
Preference number: 4 (lower is better)
Translates to: GAGRWAAPGATARVDSCEKLPPG*LTQRPW
Trigger: CCATGGACGCTGCGTCAGCCAGCCAGGGGGCAACTT...CTCGCAACTGTCCACGCGTGCCGTGGCACCAGGCGCTGCCCACCTGCCGGCCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp CGCCCTCTACAGCCACCACAGCCACGTGGGCCAATACCCAGCACGCGCCCCACTCAGGTGGCCGGAGCGTaGCAGGCAGGGGGTGCTCGG +
Preference number: 4 (lower is better)
Translates to: RPLQPPQPRGPIPSTRPTQVAGA*QAGGAR
Trigger: CCGAGCACCCCCTGCCTGCCACGCTCCGGCCACCTG...AGTGGGGCGCGTGCTGGGTATTGGCCCACGTGGCTGTGGTGGCTGTAGAGGGCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp ACTATGCACATGGCCTCGGCCTCCGGGTCCGGCAGACGGCATGGCTCCCACCGATCCCACCGAGGGCCCTaGGTCCCGGCCCAGCTGGCA +
Preference number: 4 (lower is better)
Translates to: TMHMASASGSGRRHGSHRSHRGP*VPAQLA
Trigger: TGCCAGCTGGGCCGGGACCCAGGGCCCTCGGTGGGA...TCGGTGGGAGCCATGCCGTCTGCCGGACCCGGAGGCCGAGGCCATGTGCATAGT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR TCA 90 bp GGTGGGCAGCGCCTGGTGCCACGGCACGCGTGGACAGTTGCGAGGGGTCTGTGTTGTTCCCCCGCTGGGTaGTGGCGGCCACGATGGCGT +
Preference number: 4 (lower is better)
Translates to: GGQRLVPRHAWTVARGLCCSPAG*WRPRWR
Trigger: ACGCCATCGTGGCCGCCATCACCCAGCGGGGGAACA...ACACAGACCCCTCGCAACTGTCCACGCGTGCCGTGGCACCAGGCGCTGCCCACC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR TCA 90 bp GCCACGGGTCCCACCAACAGCCATGGGCCACACCAACACAGCCATGGGTCTCACCCTCCTCATCCTCCCTaGCGGCCGCGTGGCCGGCCG +
Preference number: 4 (lower is better)
Translates to: ATGPTNSHGPHQHSHGSHPPHPP*RPRGRP
Trigger: CGGCCGGCCACGCGGCCGTCAGGGAGGATGAGGAGG...GTGAGACCCATGGCTGTGTTGGTGTGGCCCATGGCTGTTGGTGGGACCCGTGGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp CCTCGGCCTCCGGGTCCGGCAGACGGCATGGCTCCCACCGAGGGCCCTGGGTCCGGCCGAAAAAGTCGTTaGGGGGCCGGCAGAACTTGT +
Preference number: 4 (lower is better)
Translates to: PRPPGPADGMAPTEGPGSGRKSR*GAGRTC
Trigger: ACAAGTTCTGCCGGCCCCGCAACGACTTTTTCGGCC...GGACCCAGGGCCCTCGGTGGGAGCCATGCCGTCTGCCGGACCCGGAGGCCGAGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp GGTGGGCAGCGCCTGGTGCCACGGCACGCGTGGACAGTTGCGAGGGGTCTGTGTCCTGGTCCACACAGGTaGCACCGGCCGCACACGGGT +
Preference number: 4 (lower is better)
Translates to: GGQRLVPRHAWTVARGLCPGPHR*HRPHTG
Trigger: ACCCGTGTGCGGCCGGTGGCACCTGTGTGGACCAGG...ACACAGACCCCTCGCAACTGTCCACGCGTGCCGTGGCACCAGGCGCTGCCCACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp CTCGGCCTCCGGGTCCGGCAGACGGCATGGCTCCCACCGAGGGCCCTGGGTCCCGCTCTTTCCTGCGCTTaGGTGTCCACCACACGCACA +
Preference number: 4 (lower is better)
Translates to: LGLRVRQTAWLPPRALGPALSCA*VSTTRT
Trigger: TGTGCGTGTGGTGGACACGCAAGCGCAGGAAAGAGC...GGGACCCAGGGCCCTCGGTGGGAGCCATGCCGTCTGCCGGACCCGGAGGCCGAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp CTCGGCCTCCGGGTCCGGCAGACGGCATGGCTCCCACCGAGGGCCCTGGGTCCCTCTCCCGCTCTTTCCTaGGCTTGCGTGTCCACCACA +
Preference number: 4 (lower is better)
Translates to: LGLRVRQTAWLPPRALGPSPALS*ACVSTT
Trigger: TGTGGTGGACACGCAAGCGCAGGAAAGAGCGGGAGA...GGGACCCAGGGCCCTCGGTGGGAGCCATGCCGTCTGCCGGACCCGGAGGCCGAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp CCTCGGCCTCCGGGTCCGGCAGACGGCATGGCTCCCACCGAGGGCCCTGGGTCCCACGAGCTTCAATACTaGCGCCGTCCCAGGATGGGA +
Preference number: 4 (lower is better)
Translates to: PRPPGPADGMAPTEGPGSHELQY*RRPRMG
Trigger: TCCCATCCTGGGACGGCGGCAGTATTGAAGCTCGTG...GGACCCAGGGCCCTCGGTGGGAGCCATGCCGTCTGCCGGACCCGGAGGCCGAGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp CGCCCTCTACAGCCACCACAGCCACGTGGGCCAATACCCAGCACGCGCCCCACTCGTCCAGCTGGCAGGTaGCCCCCACCCACTGCTCGG +
Preference number: 4 (lower is better)
Translates to: RPLQPPQPRGPIPSTRPTRPAGR*PPPTAR
Trigger: CCGAGCAGTGGGTGGGGGCCACCTGCCAGCTGGACG...AGTGGGGCGCGTGCTGGGTATTGGCCCACGTGGCTGTGGTGGCTGTAGAGGGCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp CTCGGCCTCCGGGTCCGGCAGACGGCATGGCTCCCACCGAGGGCCCTGGGTCCCGTTCCGGCAGGGGCTTaGCTCACAAAGGTCGACATC +
Preference number: 4 (lower is better)
Translates to: LGLRVRQTAWLPPRALGPVPAGA*LTKVDI
Trigger: GATGTCGACCTTTGTGAGCCAAGCCCCTGCCGGAAC...GGGACCCAGGGCCCTCGGTGGGAGCCATGCCGTCTGCCGGACCCGGAGGCCGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp CCTCGGCCTCCGGGTCCGGCAGACGGCATGGCTCCCACCGAGGGCCCTGGGTCCTGGAACTCGCGTGAGTaGCAGGTCTTGCCCTTCCAG +
Preference number: 4 (lower is better)
Translates to: PRPPGPADGMAPTEGPGSWNSRE*QVLPFQ
Trigger: CTGGAAGGGCAAGACCTGCCACTCACGCGAGTTCCA...GGACCCAGGGCCCTCGGTGGGAGCCATGCCGTCTGCCGGACCCGGAGGCCGAGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp CCTCGGCCTCCGGGTCCGGCAGACGGCATGGCTCCCACCGAGGGCCCTGGGTCCAAGAAACTATGCACATaGCCTCGGCCTCCGGGTCCG +
Preference number: 4 (lower is better)
Translates to: PRPPGPADGMAPTEGPGSKKLCT*PRPPGP
Trigger: CGGACCCGGAGGCCGAGGCCATGTGCATAGTTTCTT...GGACCCAGGGCCCTCGGTGGGAGCCATGCCGTCTGCCGGACCCGGAGGCCGAGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp CCTCGGCCTCCGGGTCCGGCAGACGGCATGGCTCCCACCGAGGGCCCTGGGTCCACCGGCACTTTGGCCTaGAGCCACAGAGAAACCCGA +
Preference number: 4 (lower is better)
Translates to: PRPPGPADGMAPTEGPGSTGTLA*SHRETR
Trigger: TCGGGTTTCTCTGTGGCTCCAGGCCAAAGTGCCGGT...GGACCCAGGGCCCTCGGTGGGAGCCATGCCGTCTGCCGGACCCGGAGGCCGAGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp CGCCCTCTACAGCCACCACAGCCACGTGGGCCAATACCCAGCACGCGCCCCACTCAGGTGGGCAGCGCCTaGTGCCACGGCACGCGTGGA +
Preference number: 4 (lower is better)
Translates to: RPLQPPQPRGPIPSTRPTQVGSA*CHGTRG
Trigger: TCCACGCGTGCCGTGGCACCAGGCGCTGCCCACCTG...AGTGGGGCGCGTGCTGGGTATTGGCCCACGTGGCTGTGGTGGCTGTAGAGGGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp GGGGCCGGCAGGTGGGCAGCGCCTGGTGCCACGGCACGCGTGGACAGTTGCGAGAGCTCCAGGGCCAGGTaGAAGGGCTGCTTCTCTCCT +
Preference number: 4 (lower is better)
Translates to: GAGRWAAPGATARVDSCESSRAR*KGCFSP
Trigger: AGGAGAGAAGCAGCCCTTCCACCTGGCCCTGGAGCT...CTCGCAACTGTCCACGCGTGCCGTGGCACCAGGCGCTGCCCACCTGCCGGCCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR TCA 90 bp GGGGCCGGCAGGTGGGCAGCGCCTGGTGCCACGGCACGCGTGGACAGTTGCGAGTGCGAGGGGTCTGTGTaGAGGCACTTGTCACGAGCT +
Preference number: 4 (lower is better)
Translates to: GAGRWAAPGATARVDSCECEGSV*RHLSRA
Trigger: AGCTCGTGACAAGTGCCTTCACACAGACCCCTCGCA...CTCGCAACTGTCCACGCGTGCCGTGGCACCAGGCGCTGCCCACCTGCCGGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR TCA 90 bp CTCGGCCTCCGGGTCCGGCAGACGGCATGGCTCCCACCGAGGGCCCTGGGTCCCAGTTGGCTCAAGCAGTaGGGGGCAAAACCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: LGLRVRQTAWLPPRALGPSWLKQ*GAKPAP
Trigger: TGGAGCTGGTTTTGCCCCTCACTGCTTGAGCCAACT...GGGACCCAGGGCCCTCGGTGGGAGCCATGCCGTCTGCCGGACCCGGAGGCCGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp GGGGCCGGCAGGTGGGCAGCGCCTGGTGCCACGGCACGCGTGGACAGTTGCGAGCCATGCAGGCCTTGTTaGCGTACTGGTCGCAGGTGT +
Preference number: 4 (lower is better)
Translates to: GAGRWAAPGATARVDSCEPCRPC*RTGRRC
Trigger: ACACCTGCGACCAGTACGGCAACAAGGCCTGCATGG...CTCGCAACTGTCCACGCGTGCCGTGGCACCAGGCGCTGCCCACCTGCCGGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp GGTGGGCAGCGCCTGGTGCCACGGCACGCGTGGACAGTTGCGAGGGGTCTGTGTCCAGGAGCTTCCGTGTaGGAACGGAGTGCCCCGGGA +
Preference number: 4 (lower is better)
Translates to: GGQRLVPRHAWTVARGLCPGASV*ERSAPG
Trigger: TCCCGGGGCACTCCGTTCCCACACGGAAGCTCCTGG...ACACAGACCCCTCGCAACTGTCCACGCGTGCCGTGGCACCAGGCGCTGCCCACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp GCCACGGGTCCCACCAACAGCCATGGGCCACACCAACACAGCCATGGGTCTCACCAGGTGGCCGGAGCGTaGCAGGCAGGGGGTGCTCGG +
Preference number: 4 (lower is better)
Translates to: ATGPTNSHGPHQHSHGSHQVAGA*QAGGAR
Trigger: CCGAGCACCCCCTGCCTGCCACGCTCCGGCCACCTG...GTGAGACCCATGGCTGTGTTGGTGTGGCCCATGGCTGTTGGTGGGACCCGTGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp TCGAGGCCCTGGCAGGCCCCGACTCAACAGAACCGTCTCGCCCTCTACAGCCACCCACCTCCACAGCACTaGCCCCCGAGGACGCCCGGT +
Preference number: 4 (lower is better)
Translates to: SRPWQAPTQQNRLALYSHPPPQH*PPRTPG
Trigger: ACCGGGCGTCCTCGGGGGCCAGTGCTGTGGAGGTGG...GTGGCTGTAGAGGGCGAGACGGTTCTGTTGAGTCGGGGCCTGCCAGGGCCTCGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp GGGGCCGGCAGGTGGGCAGCGCCTGGTGCCACGGCACGCGTGGACAGTTGCGAGAAGAAACTATGCACATaGCCTCGGCCTCCGGGTCCG +
Preference number: 4 (lower is better)
Translates to: GAGRWAAPGATARVDSCEKKLCT*PRPPGP
Trigger: CGGACCCGGAGGCCGAGGCCATGTGCATAGTTTCTT...CTCGCAACTGTCCACGCGTGCCGTGGCACCAGGCGCTGCCCACCTGCCGGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR TCA 90 bp AATACTGCCGCCGTCCCAGGATGGGAGAACTGCGCAGCAGGAAGGGCACTTCTGCCTCCTCATCCTCCCTaGCGGCCGCGTGGCCGGCCG +
Preference number: 4 (lower is better)
Translates to: NTAAVPGWENCAAGRALLPPHPP*RPRGRP
Trigger: CGGCCGGCCACGCGGCCGTCAGGGAGGATGAGGAGG...CAGAAGTGCCCTTCCTGCTGCGCAGTTCTCCCATCCTGGGACGGCGGCAGTATT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp ACTATGCACATGGCCTCGGCCTCCGGGTCCGGCAGACGGCATGGCTCCCACCGAAGCCGTAGCTGCACCTaGACTCCCCAGGCACGGTGC +
Preference number: 4 (lower is better)
Translates to: TMHMASASGSGRRHGSHRSRSCT*TPQARC
Trigger: GCACCGTGCCTGGGGAGTGCAGGTGCAGCTACGGCT...TCGGTGGGAGCCATGCCGTCTGCCGGACCCGGAGGCCGAGGCCATGTGCATAGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp GGTGGGCAGCGCCTGGTGCCACGGCACGCGTGGACAGTTGCGAGGGGTCTGTGTTTCTCCAGGCACCTTTaGCCCAGTGGGCACTGGGCG +
Preference number: 4 (lower is better)
Translates to: GGQRLVPRHAWTVARGLCFSRHL*PSGHWA
Trigger: CGCCCAGTGCCCACTGGGGCAAAGGTGCCTGGAGAA...ACACAGACCCCTCGCAACTGTCCACGCGTGCCGTGGCACCAGGCGCTGCCCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR TCA 90 bp CGCCCTCTACAGCCACCACAGCCACGTGGGCCAATACCCAGCACGCGCCCCACTAGCGGTCCTCCGGGTTaGTCATGCCGGCATGCGACA +
Preference number: 4 (lower is better)
Translates to: RPLQPPQPRGPIPSTRPTSGPPG*SCRHAT
Trigger: TGTCGCATGCCGGCATGATCAACCCGGAGGACCGCT...AGTGGGGCGCGTGCTGGGTATTGGCCCACGTGGCTGTGGTGGCTGTAGAGGGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR TCA 90 bp CACATCACTGACAGGCGGCTCGGAGTCAGCCTTGGAGTCGGCCTTCCATGCCCACCCAGGCCCCGCGTCTaGCCCGCAGCCATCGATCAC +
Preference number: 4 (lower is better)
Translates to: HITDRRLGVSLGVGLPCPPRPRV*PAAIDH
Trigger: GTGATCGATGGCTGCGGGTCAGACGCGGGGCCTGGG...TGGGCATGGAAGGCCGACTCCAAGGCTGACTCCGAGCCGCCTGTCAGTGATGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR TCA 90 bp CACGGGTCCCACCAACAGCCATGGGCCACACCAACACAGCCATGGGTCTCACCGTGTTCCCCCGCTGGGTaGTGGCGGCCACGATGGCGT +
Preference number: 4 (lower is better)
Translates to: HGSHQQPWATPTQPWVSPCSPAG*WRPRWR
Trigger: ACGCCATCGTGGCCGCCATCACCCAGCGGGGGAACA...CGGTGAGACCCATGGCTGTGTTGGTGTGGCCCATGGCTGTTGGTGGGACCCGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp TCGAGGCCCTGGCAGGCCCCGACTCAACAGAACCGTCTCGCCCTCTACAGCCACGTGGCCCCCACCCACTaGTCGGGGCAGATGCACTCA +
Preference number: 4 (lower is better)
Translates to: SRPWQAPTQQNRLALYSHVAPTH*SGQMHS
Trigger: TGAGTGCATCTGCCCCGAGCAGTGGGTGGGGGCCAC...GTGGCTGTAGAGGGCGAGACGGTTCTGTTGAGTCGGGGCCTGCCAGGGCCTCGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp CACGGGTCCCACCAACAGCCATGGGCCACACCAACACAGCCATGGGTCTCACCGAGCGCGAGGTTGACCTaGCAGCCTTGGGCCACGCCG +
Preference number: 4 (lower is better)
Translates to: HGSHQQPWATPTQPWVSPSARLT*QPWATP
Trigger: CGGCGTGGCCCAAGGCTGGCAGGTCAACCTCGCGCT...CGGTGAGACCCATGGCTGTGTTGGTGTGGCCCATGGCTGTTGGTGGGACCCGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp GGTGGGCAGCGCCTGGTGCCACGGCACGCGTGGACAGTTGCGAGGGGTCTGTGTCAGGTGCAGCGGTACTaGTCAGGCTCGGCGTTGATG +
Preference number: 4 (lower is better)
Translates to: GGQRLVPRHAWTVARGLCQVQRY*SGSALM
Trigger: CATCAACGCCGAGCCTGACCAGTACCGCTGCACCTG...ACACAGACCCCTCGCAACTGTCCACGCGTGCCGTGGCACCAGGCGCTGCCCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp GCCACGGGTCCCACCAACAGCCATGGGCCACACCAACACAGCCATGGGTCTCACGGCCCGGAGAAGCCCTaGGGGCAGTGGCAGTGGAAG +
Preference number: 4 (lower is better)
Translates to: ATGPTNSHGPHQHSHGSHGPEKP*GQWQWK
Trigger: CTTCCACTGCCACTGCCCCCAGGGCTTCTCCGGGCC...GTGAGACCCATGGCTGTGTTGGTGTGGCCCATGGCTGTTGGTGGGACCCGTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp CACGGGTCCCACCAACAGCCATGGGCCACACCAACACAGCCATGGGTCTCACCGCTGACGCAGCGTCCATaGGGGCCACACACGCCGGAG +
Preference number: 4 (lower is better)
Translates to: HGSHQQPWATPTQPWVSPLTQRP*GPHTPE
Trigger: CTCCGGCGTGTGTGGCCCCCATGGACGCTGCGTCAG...CGGTGAGACCCATGGCTGTGTTGGTGTGGCCCATGGCTGTTGGTGGGACCCGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR TCA 90 bp CACGGGTCCCACCAACAGCCATGGGCCACACCAACACAGCCATGGGTCTCACCGCGAACTGGAAGGGGATaGCGACGAGGCCCGGGTCCT +
Preference number: 4 (lower is better)
Translates to: HGSHQQPWATPTQPWVSPRTGRG*RRGPGP
Trigger: AGGACCCGGGCCTCGTCGTCATCCCCTTCCAGTTCG...CGGTGAGACCCATGGCTGTGTTGGTGTGGCCCATGGCTGTTGGTGGGACCCGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR TCA 90 bp GCCACGGGTCCCACCAACAGCCATGGGCCACACCAACACAGCCATGGGTCTCACGGTTGCGGATGGGGTTaGGCGGGGCCCACTGGTTGT +
Preference number: 4 (lower is better)
Translates to: ATGPTNSHGPHQHSHGSHGCGWG*AGPTGC
Trigger: ACAACCAGTGGGCCCCGCTCAACCCCATCCGCAACC...GTGAGACCCATGGCTGTGTTGGTGTGGCCCATGGCTGTTGGTGGGACCCGTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR TCA 90 bp CCACTGCCCCAAGCCTCTCTGCCGGCGTGGCTCTCCCCCAACCTCACTCTCAATCAGCAAGCGCGAGGTTaGCCTGCCAGCCTTGGGCCA +
Preference number: 4 (lower is better)
Translates to: PLPQASLPAWLSPNLTLNQQARG*PASLGP
Trigger: TGGCCCAAGGCTGGCAGGTCAACCTCGCGCTTGCTG...ATTGAGAGTGAGGTTGGGGGAGAGCCACGCCGGCAGAGAGGCTTGGGGCAGTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR TCA 90 bp GGTGGGCAGCGCCTGGTGCCACGGCACGCGTGGACAGTTGCGAGGGGTCTGTGTAGTTCGGAACGAGACTaGCAGCTCGCTCGCCCATTC +
Preference number: 4 (lower is better)
Translates to: GGQRLVPRHAWTVARGLCSSERD*QLARPF
Trigger: GAATGGGCGAGCGAGCTGTCAGTCTCGTTCCGAACT...ACACAGACCCCTCGCAACTGTCCACGCGTGCCGTGGCACCAGGCGCTGCCCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000347004.2
CDS-3UTR GCA 90 bp GGTGGGCAGCGCCTGGTGCCACGGCACGCGTGGACAGTTGCGAGGGGTCTGTGTCCATGCAGGCCTTGTTaGCGTACTGGTCGCAGGTGT +
Preference number: 4 (lower is better)
Translates to: GGQRLVPRHAWTVARGLCPCRPC*RTGRRC
Trigger: ACACCTGCGACCAGTACGGCAACAAGGCCTGCATGG...ACACAGACCCCTCGCAACTGTCCACGCGTGCCGTGGCACCAGGCGCTGCCCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp CGCCCTCTACAGCCACCACAGCCACGTGGGCCAATACCCAGCACGCGCCCCACTCCTTCTCACAGTTCCTaGCCGAGTAGCCGTCAGGGC +
Preference number: 4 (lower is better)
Translates to: RPLQPPQPRGPIPSTRPTPSHSS*PSSRQG
Trigger: GCCCTGACGGCTACTCGGGCAGGAACTGTGAGAAGG...AGTGGGGCGCGTGCTGGGTATTGGCCCACGTGGCTGTGGTGGCTGTAGAGGGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp GCACTTGTCACGAGCTTCAATACTGCCGCCGTCCCAGGATGGGAGAACTGCGCATGGCGACGGCGCAGGTaGTGCCCTTCCAGCCGGGGG +
Preference number: 4 (lower is better)
Translates to: ALVTSFNTAAVPGWENCAWRRRR*CPSSRG
Trigger: CCCCCGGCTGGAAGGGCAGCACCTGCGCCGTCGCCA...TGCGCAGTTCTCCCATCCTGGGACGGCGGCAGTATTGAAGCTCGTGACAAGTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp GCCACGGGTCCCACCAACAGCCATGGGCCACACCAACACAGCCATGGGTCTCACCGTGTGGGAACGGAGTaGCCCGGGACCAGCAGGATC +
Preference number: 4 (lower is better)
Translates to: ATGPTNSHGPHQHSHGSHRVGTE*PGTSRI
Trigger: GATCCTGCTGGTCCCGGGGCACTCCGTTCCCACACG...GTGAGACCCATGGCTGTGTTGGTGTGGCCCATGGCTGTTGGTGGGACCCGTGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp ACTATGCACATGGCCTCGGCCTCCGGGTCCGGCAGACGGCATGGCTCCCACCGAGCCCTGAGGCCACCATaGCACGTTCCAGTTGGCTCA +
Preference number: 4 (lower is better)
Translates to: TMHMASASGSGRRHGSHRALRPP*HVPVGS
Trigger: TGAGCCAACTGGAACGTGGCATGGTGGCCTCAGGGC...TCGGTGGGAGCCATGCCGTCTGCCGGACCCGGAGGCCGAGGCCATGTGCATAGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp CTCGGCCTCCGGGTCCGGCAGACGGCATGGCTCCCACCGAGGGCCCTGGGTCCCTCGTTGACGTTGATATaGCAGTTGATGCCCTTCCAG +
Preference number: 4 (lower is better)
Translates to: LGLRVRQTAWLPPRALGPSLTLI*QLMPFQ
Trigger: CTGGAAGGGCATCAACTGCCATATCAACGTCAACGA...GGGACCCAGGGCCCTCGGTGGGAGCCATGCCGTCTGCCGGACCCGGAGGCCGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331782.8
CDS-3UTR CCA 90 bp ACGCCGATGACCTCAGGCCCCACTAACAACCACAGGTGCGTCAACAGCCACGGGGGCCCGGAGAAGCCCTaGGGGCAGTGGCAGTGGAAG +
Preference number: 4 (lower is better)
Translates to: TPMTSGPTNNHRCVNSHGGPEKP*GQWQWK
Trigger: CTTCCACTGCCACTGCCCCCAGGGCTTCTCCGGGCC...CCCGTGGCTGTTGACGCACCTGTGGTTGTTAGTGGGGCCTGAGGTCATCGGCGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp TTGCACATCACTGACAGGCGGCTCGGAGTCAGCCTTGGAGTCGGCCTTCCATGCGCCGGCTCGGCCGGGTaGGCAGCTACAGCGATACCC +
Preference number: 4 (lower is better)
Translates to: LHITDRRLGVSLGVGLPCAGSAG*AATAIP
Trigger: GGGTATCGCTGTAGCTGCCCACCCGGCCGAGCCGGC...GCATGGAAGGCCGACTCCAAGGCTGACTCCGAGCCGCCTGTCAGTGATGTGCAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp TTGCACATCACTGACAGGCGGCTCGGAGTCAGCCTTGGAGTCGGCCTTCCATGCCTCAGGGCCTCGGGCTaGCCGGCCAGCAGACAAGGC +
Preference number: 4 (lower is better)
Translates to: LHITDRRLGVSLGVGLPCLRASG*PASRQG
Trigger: GCCTTGTCTGCTGGCCGGCCAGCCCGAGGCCCTGAG...GCATGGAAGGCCGACTCCAAGGCTGACTCCGAGCCGCCTGTCAGTGATGTGCAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp GCCACGGGTCCCACCAACAGCCATGGGCCACACCAACACAGCCATGGGTCTCACCCAGGCCTCACAGGGTaGTCGCAGACACTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: ATGPTNSHGPHQHSHGSHPGLTG*SQTLAW
Trigger: CCAGGCCAGTGTCTGCGACCACCCTGTGAGGCCTGG...GTGAGACCCATGGCTGTGTTGGTGTGGCCCATGGCTGTTGGTGGGACCCGTGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp ACGCCGATGACCTCAGGCCCCACTAACAACCACAGGTGCGTCAACAGCCACGGGGCAGGGGGTGCTCGGTaGCTCTTCTGCGCCGCACTC +
Preference number: 4 (lower is better)
Translates to: TPMTSGPTNNHRCVNSHGAGGAR*LFCAAL
Trigger: GAGTGCGGCGCAGAAGAGCCACCGAGCACCCCCTGC...CCCGTGGCTGTTGACGCACCTGTGGTTGTTAGTGGGGCCTGAGGTCATCGGCGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp ACGCCGATGACCTCAGGCCCCACTAACAACCACAGGTGCGTCAACAGCCACGGGCCCACCGTGGTGCCCTaGGGCACGTGGTCACGGTTG +
Preference number: 4 (lower is better)
Translates to: TPMTSGPTNNHRCVNSHGPTVVP*GTWSRL
Trigger: CAACCGTGACCACGTGCCCCAGGGCACCACGGTGGG...CCCGTGGCTGTTGACGCACCTGTGGTTGTTAGTGGGGCCTGAGGTCATCGGCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp GCCACGGGTCCCACCAACAGCCATGGGCCACACCAACACAGCCATGGGTCTCACGGATCCCGGAGCAAATaGCGCCCACCGTGGTGCCCT +
Preference number: 4 (lower is better)
Translates to: ATGPTNSHGPHQHSHGSHGSRSK*RPPWCP
Trigger: AGGGCACCACGGTGGGCGCCATTTGCTCCGGGATCC...GTGAGACCCATGGCTGTGTTGGTGTGGCCCATGGCTGTTGGTGGGACCCGTGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp GCCACGGGTCCCACCAACAGCCATGGGCCACACCAACACAGCCATGGGTCTCACGTGCCACAGCCCTTGTaGCTGGCAGGGAGCGGATCC +
Preference number: 4 (lower is better)
Translates to: ATGPTNSHGPHQHSHGSHVPQPL*LAGSGS
Trigger: GGATCCGCTCCCTGCCAGCCACAAGGGCTGTGGCAC...GTGAGACCCATGGCTGTGTTGGTGTGGCCCATGGCTGTTGGTGGGACCCGTGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp ACGCCGATGACCTCAGGCCCCACTAACAACCACAGGTGCGTCAACAGCCACGGGGGGCCCACTGGTTGTTaGCGCTCTCCTCCCGCGGCA +
Preference number: 4 (lower is better)
Translates to: TPMTSGPTNNHRCVNSHGGPTGC*RSPPAA
Trigger: TGCCGCGGGAGGAGAGCGCCAACAACCAGTGGGCCC...CCCGTGGCTGTTGACGCACCTGTGGTTGTTAGTGGGGCCTGAGGTCATCGGCGT
66% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp TCGAGGCCCTGGCAGGCCCCGACTCAACAGAACCGTCTCGCCCTCTACAGCCACGCTCGGAGTCAGCCTTaGAGTCGGCCTTCCATGCCC +
Preference number: 4 (lower is better)
Translates to: SRPWQAPTQQNRLALYSHARSQP*SRPSMP
Trigger: GGGCATGGAAGGCCGACTCCAAGGCTGACTCCGAGC...GTGGCTGTAGAGGGCGAGACGGTTCTGTTGAGTCGGGGCCTGCCAGGGCCTCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR TCA 90 bp ACCTCCTACCCCTCACAGCAGGGTAAAGACTTGCACATCACTGACAGGCGGCTCTGCCCCCTGGCTGGCTaGCGCAGCGTCCATGGGGGC +
Preference number: 4 (lower is better)
Translates to: TSYPSQQGKDLHITDRRLCPLAG*RSVHGG
Trigger: GCCCCCATGGACGCTGCGTCAGCCAGCCAGGGGGCA...GAGCCGCCTGTCAGTGATGTGCAAGTCTTTACCCTGCTGTGAGGGGTAGGAGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR TCA 90 bp AATACTGCCGCCGTCCCAGGATGGGAGAACTGCGCAGCAGGAAGGGCACTTCTGGGTCCCTGGCAGGGCTaGAGGACACGGCCACCTCCA +
Preference number: 4 (lower is better)
Translates to: NTAAVPGWENCAAGRALLGPWQG*RTRPPP
Trigger: TGGAGGTGGCCGTGTCCTTCAGCCCTGCCAGGGACC...CAGAAGTGCCCTTCCTGCTGCGCAGTTCTCCCATCCTGGGACGGCGGCAGTATT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp TTGCACATCACTGACAGGCGGCTCGGAGTCAGCCTTGGAGTCGGCCTTCCATGCCAGCGCACGCGGATCTaGAGCTCCAGGTGCGCCACG +
Preference number: 4 (lower is better)
Translates to: LHITDRRLGVSLGVGLPCQRTRI*SSRCAT
Trigger: CGTGGCGCACCTGGAGCTGCAGATCCGCGTGCGCTG...GCATGGAAGGCCGACTCCAAGGCTGACTCCGAGCCGCCTGTCAGTGATGTGCAA
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp GCCACGGGTCCCACCAACAGCCATGGGCCACACCAACACAGCCATGGGTCTCACAGCCGTCAGGGCAGGTaGAGCGGTACTGGTCAGGCT +
Preference number: 4 (lower is better)
Translates to: ATGPTNSHGPHQHSHGSHSRQGR*SGTGQA
Trigger: AGCCTGACCAGTACCGCTGCACCTGCCCTGACGGCT...GTGAGACCCATGGCTGTGTTGGTGTGGCCCATGGCTGTTGGTGGGACCCGTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp CCACTGCCCCAAGCCTCTCTGCCGGCGTGGCTCTCCCCCAACCTCACTCTCAATGTGAGTGGCAGGTCTTaGCCTTCCAGCCGTCGTCGC +
Preference number: 4 (lower is better)
Translates to: PLPQASLPAWLSPNLTLNVSGRS*PSSRRR
Trigger: GCGACGACGGCTGGAAGGGCAAGACCTGCCACTCAC...ATTGAGAGTGAGGTTGGGGGAGAGCCACGCCGGCAGAGAGGCTTGGGGCAGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp CACATCACTGACAGGCGGCTCGGAGTCAGCCTTGGAGTCGGCCTTCCATGCCCACCCCGCGAAGCCAGGTaGACACTCGCAGCGGAACCA +
Preference number: 4 (lower is better)
Translates to: HITDRRLGVSLGVGLPCPPREAR*TLAAEP
Trigger: TGGTTCCGCTGCGAGTGTGCACCTGGCTTCGCGGGG...TGGGCATGGAAGGCCGACTCCAAGGCTGACTCCGAGCCGCCTGTCAGTGATGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp GCCACGGGTCCCACCAACAGCCATGGGCCACACCAACACAGCCATGGGTCTCACCGCACCACACCTTGCTaGAGTCACGGCGGCCATCCA +
Preference number: 4 (lower is better)
Translates to: ATGPTNSHGPHQHSHGSHRTTPC*SHGGHP
Trigger: TGGATGGCCGCCGTGACTGCAGCAAGGTGTGGTGCG...GTGAGACCCATGGCTGTGTTGGTGTGGCCCATGGCTGTTGGTGGGACCCGTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp TCGAGGCCCTGGCAGGCCCCGACTCAACAGAACCGTCTCGCCCTCTACAGCCACATCCGCACCACACCTTaGTGCAGTCACGGCGGCCAT +
Preference number: 4 (lower is better)
Translates to: SRPWQAPTQQNRLALYSHIRTTP*CSHGGH
Trigger: ATGGCCGCCGTGACTGCAGCAAGGTGTGGTGCGGAT...GTGGCTGTAGAGGGCGAGACGGTTCTGTTGAGTCGGGGCCTGCCAGGGCCTCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp GCCACGGGTCCCACCAACAGCCATGGGCCACACCAACACAGCCATGGGTCTCACTTCTCCAGGCACCTTTaGCCCAGTGGGCACTGGGCG +
Preference number: 4 (lower is better)
Translates to: ATGPTNSHGPHQHSHGSHFSRHL*PSGHWA
Trigger: CGCCCAGTGCCCACTGGGGCAAAGGTGCCTGGAGAA...GTGAGACCCATGGCTGTGTTGGTGTGGCCCATGGCTGTTGGTGGGACCCGTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp ACTATGCACATGGCCTCGGCCTCCGGGTCCGGCAGACGGCATGGCTCCCACCGACACGAGCTTCAATACTaGCGCCGTCCCAGGATGGGA +
Preference number: 4 (lower is better)
Translates to: TMHMASASGSGRRHGSHRHELQY*RRPRMG
Trigger: TCCCATCCTGGGACGGCGGCAGTATTGAAGCTCGTG...TCGGTGGGAGCCATGCCGTCTGCCGGACCCGGAGGCCGAGGCCATGTGCATAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp GCCGGCGTGGCTCTCCCCCAACCTCACTCTCAATACAAAAGGGACAGCACCGAAGTGGGCAGCGCCTGGTaGCACGGCACGCGTGGACAG +
Preference number: 4 (lower is better)
Translates to: AGVALPQPHSQYKRDSTEVGSAW*HGTRGQ
Trigger: CTGTCCACGCGTGCCGTGGCACCAGGCGCTGCCCAC...TTCGGTGCTGTCCCTTTTGTATTGAGAGTGAGGTTGGGGGAGAGCCACGCCGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp CGCCCTCTACAGCCACCACAGCCACGTGGGCCAATACCCAGCACGCGCCCCACTTCCACCACCTTGGCATaGCAACGCATTCGAGGCCCT +
Preference number: 4 (lower is better)
Translates to: RPLQPPQPRGPIPSTRPTSTTLA*QRIRGP
Trigger: AGGGCCTCGAATGCGTTGGCATGCCAAGGTGGTGGA...AGTGGGGCGCGTGCTGGGTATTGGCCCACGTGGCTGTGGTGGCTGTAGAGGGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp CTCGGCCTCCGGGTCCGGCAGACGGCATGGCTCCCACCGAGGGCCCTGGGTCCCAGAACTTGTTGCAAGTaGCGCTGTAGTAGTTCTCGT +
Preference number: 4 (lower is better)
Translates to: LGLRVRQTAWLPPRALGPRTCCK*RCSSSR
Trigger: ACGAGAACTACTACAGCGCCACTTGCAACAAGTTCT...GGGACCCAGGGCCCTCGGTGGGAGCCATGCCGTCTGCCGGACCCGGAGGCCGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp GCCACGGGTCCCACCAACAGCCATGGGCCACACCAACACAGCCATGGGTCTCACCGTTGGCACACGGGTTaGAGGTGCAGGCGTGCTCAG +
Preference number: 4 (lower is better)
Translates to: ATGPTNSHGPHQHSHGSHRWHTG*RCRRAQ
Trigger: CTGAGCACGCCTGCACCTCCAACCCGTGTGCCAACG...GTGAGACCCATGGCTGTGTTGGTGTGGCCCATGGCTGTTGGTGGGACCCGTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp CACATCACTGACAGGCGGCTCGGAGTCAGCCTTGGAGTCGGCCTTCCATGCCCAGGCAAGAGCCCCCGTTaGCACACGGGTTGGAGGTGC +
Preference number: 4 (lower is better)
Translates to: HITDRRLGVSLGVGLPCPGKSPR*HTGWRC
Trigger: GCACCTCCAACCCGTGTGCCAACGGGGGCTCTTGCC...TGGGCATGGAAGGCCGACTCCAAGGCTGACTCCGAGCCGCCTGTCAGTGATGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp ACGCCGATGACCTCAGGCCCCACTAACAACCACAGGTGCGTCAACAGCCACGGGCAGCCCGATGGGCAGTaGCATTCGAAGCCGGACGGC +
Preference number: 4 (lower is better)
Translates to: TPMTSGPTNNHRCVNSHGQPDGQ*HSKPDG
Trigger: GCCGTCCGGCTTCGAATGCCACTGCCCATCGGGCTG...CCCGTGGCTGTTGACGCACCTGTGGTTGTTAGTGGGGCCTGAGGTCATCGGCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp CACATCACTGACAGGCGGCTCGGAGTCAGCCTTGGAGTCGGCCTTCCATGCCCACCCGCTCCAGCCCGATaGGCAGTGGCATTCGAAGCC +
Preference number: 4 (lower is better)
Translates to: HITDRRLGVSLGVGLPCPPAPAR*AVAFEA
Trigger: GGCTTCGAATGCCACTGCCCATCGGGCTGGAGCGGG...TGGGCATGGAAGGCCGACTCCAAGGCTGACTCCGAGCCGCCTGTCAGTGATGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp TCGAGGCCCTGGCAGGCCCCGACTCAACAGAACCGTCTCGCCCTCTACAGCCACTCAAAGCCGTCCACCTaGTCCACACAGGTGCCACCG +
Preference number: 4 (lower is better)
Translates to: SRPWQAPTQQNRLALYSHSKPST*STQVPP
Trigger: CGGTGGCACCTGTGTGGACCAGGTGGACGGCTTTGA...GTGGCTGTAGAGGGCGAGACGGTTCTGTTGAGTCGGGGCCTGCCAGGGCCTCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp TTGCACATCACTGACAGGCGGCTCGGAGTCAGCCTTGGAGTCGGCCTTCCATGCAAGCCCTGGGGGCAGTaGCAGTGGAAGCCGTCGGCC +
Preference number: 4 (lower is better)
Translates to: LHITDRRLGVSLGVGLPCKPWGQ*QWKPSA
Trigger: GGCCGACGGCTTCCACTGCCACTGCCCCCAGGGCTT...GCATGGAAGGCCGACTCCAAGGCTGACTCCGAGCCGCCTGTCAGTGATGTGCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp CCACTGCCCCAAGCCTCTCTGCCGGCGTGGCTCTCCCCCAACCTCACTCTCAATCCATTGCGGCAGGGCTaGCCCAGGCAGTCGTCAATG +
Preference number: 4 (lower is better)
Translates to: PLPQASLPAWLSPNLTLNPLRQG*PRQSSM
Trigger: CATTGACGACTGCCTGGGCCAGCCCTGCCGCAATGG...ATTGAGAGTGAGGTTGGGGGAGAGCCACGCCGGCAGAGAGGCTTGGGGCAGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp CACGGGTCCCACCAACAGCCATGGGCCACACCAACACAGCCATGGGTCTCACCGCCATTGCGGCAGGGCTaGCCCAGGCAGTCGTCAATG +
Preference number: 4 (lower is better)
Translates to: HGSHQQPWATPTQPWVSPPLRQG*PRQSSM
Trigger: CATTGACGACTGCCTGGGCCAGCCCTGCCGCAATGG...CGGTGAGACCCATGGCTGTGTTGGTGTGGCCCATGGCTGTTGGTGGGACCCGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp CGCCCTCTACAGCCACCACAGCCACGTGGGCCAATACCCAGCACGCGCCCCACTCGGGAAGGCAGTCGTTaGGATTGGTGTCGCAGAGCT +
Preference number: 4 (lower is better)
Translates to: RPLQPPQPRGPIPSTRPTREGSR*DWCRRA
Trigger: AGCTCTGCGACACCAATCCCAACGACTGCCTTCCCG...AGTGGGGCGCGTGCTGGGTATTGGCCCACGTGGCTGTGGTGGCTGTAGAGGGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp TTGGCCAAACCTGCATCCACCACCTTGGCATGCCAACGCATTCGAGGCCCTGGCAACCCGATCACTTCCTaGCACCGGGGGCCGGCTCGG +
Preference number: 4 (lower is better)
Translates to: LAKPASTTLACQRIRGPGNPITS*HRGPAR
Trigger: CCGAGCCGGCCCCCGGTGCCAGGAAGTGATCGGGTT...GCCAGGGCCTCGAATGCGTTGGCATGCCAAGGTGGTGGATGCAGGTTTGGCCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp GCCGGCGTGGCTCTCCCCCAACCTCACTCTCAATACAAAAGGGACAGCACCGAACTCAGGGCCTCGGGCTaGCCGGCCAGCAGACAAGGC +
Preference number: 4 (lower is better)
Translates to: AGVALPQPHSQYKRDSTELRASG*PASRQG
Trigger: GCCTTGTCTGCTGGCCGGCCAGCCCGAGGCCCTGAG...TTCGGTGCTGTCCCTTTTGTATTGAGAGTGAGGTTGGGGGAGAGCCACGCCGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp ACCCCTCACAGCAGGGTAAAGACTTGCACATCACTGACAGGCGGCTCGGAGTCATGCCCCAGTGGGCACTaGGCGCTCAGGGCCTCGGGC +
Preference number: 4 (lower is better)
Translates to: TPHSRVKTCTSLTGGSESCPSGH*ALRASG
Trigger: GCCCGAGGCCCTGAGCGCCCAGTGCCCACTGGGGCA...TGACTCCGAGCCGCCTGTCAGTGATGTGCAAGTCTTTACCCTGCTGTGAGGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp GTTGCGAGGGGTCTGTGTGAAGGCACTTGTCACGAGCTTCAATACTGCCGCCGTGCGGCCACGATGGCGTaGGCCGCGCCCTGGATCAGG +
Preference number: 4 (lower is better)
Translates to: VARGLCEGTCHELQYCRRAATMA*AAPWIR
Trigger: CCTGATCCAGGGCGCGGCCCACGCCATCGTGGCCGC...ACGGCGGCAGTATTGAAGCTCGTGACAAGTGCCTTCACACAGACCCCTCGCAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp CACGGGTCCCACCAACAGCCATGGGCCACACCAACACAGCCATGGGTCTCACCGTTGAGCGGGGCCCACTaGTTGTTGGCGCTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: HGSHQQPWATPTQPWVSPLSGAH*LLALSS
Trigger: GGAGGAGAGCGCCAACAACCAGTGGGCCCCGCTCAA...CGGTGAGACCCATGGCTGTGTTGGTGTGGCCCATGGCTGTTGGTGGGACCCGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp GTTGCGAGGGGTCTGTGTGAAGGCACTTGTCACGAGCTTCAATACTGCCGCCGTTCCCACCGAGGGCCCTaGGTCCCGGCCCAGCTGGCA +
Preference number: 4 (lower is better)
Translates to: VARGLCEGTCHELQYCRRSHRGP*VPAQLA
Trigger: TGCCAGCTGGGCCGGGACCCAGGGCCCTCGGTGGGA...ACGGCGGCAGTATTGAAGCTCGTGACAAGTGCCTTCACACAGACCCCTCGCAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp ACGCCGATGACCTCAGGCCCCACTAACAACCACAGGTGCGTCAACAGCCACGGGGCAGGCAGGGTGGACTaGCCAGCAAGCGCGAGGTTG +
Preference number: 4 (lower is better)
Translates to: TPMTSGPTNNHRCVNSHGAGRVD*PASARL
Trigger: CAACCTCGCGCTTGCTGGCCAGTCCACCCTGCCTGC...CCCGTGGCTGTTGACGCACCTGTGGTTGTTAGTGGGGCCTGAGGTCATCGGCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp ACGCCGATGACCTCAGGCCCCACTAACAACCACAGGTGCGTCAACAGCCACGGGGCCGCCGTCCCAGGATaGGAGAACTGCGCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: TPMTSGPTNNHRCVNSHGAAVPG*ENCAAG
Trigger: TCCTGCTGCGCAGTTCTCCCATCCTGGGACGGCGGC...CCCGTGGCTGTTGACGCACCTGTGGTTGTTAGTGGGGCCTGAGGTCATCGGCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp ACGCCGATGACCTCAGGCCCCACTAACAACCACAGGTGCGTCAACAGCCACGGGGTGCCACGGCACGCGTaGACAGTTGCGAGGGGTCTG +
Preference number: 4 (lower is better)
Translates to: TPMTSGPTNNHRCVNSHGVPRHA*TVARGL
Trigger: CAGACCCCTCGCAACTGTCCACGCGTGCCGTGGCAC...CCCGTGGCTGTTGACGCACCTGTGGTTGTTAGTGGGGCCTGAGGTCATCGGCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR TCA 90 bp AATACTGCCGCCGTCCCAGGATGGGAGAACTGCGCAGCAGGAAGGGCACTTCTGGGTCAGGCTCGGCGTTaGTGCACGTGCCTCCGTTGG +
Preference number: 4 (lower is better)
Translates to: NTAAVPGWENCAAGRALLGQARR*CTCLRW
Trigger: CCAACGGAGGCACGTGCATCAACGCCGAGCCTGACC...CAGAAGTGCCCTTCCTGCTGCGCAGTTCTCCCATCCTGGGACGGCGGCAGTATT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR TCA 90 bp AGCAGGGTAAAGACTTGCACATCACTGACAGGCGGCTCGGAGTCAGCCTTGGAGCCCAGGCCCCGCGTCTaGCCCGCAGCCATCGATCAC +
Preference number: 4 (lower is better)
Translates to: SRVKTCTSLTGGSESALEPRPRV*PAAIDH
Trigger: GTGATCGATGGCTGCGGGTCAGACGCGGGGCCTGGG...CTCCAAGGCTGACTCCGAGCCGCCTGTCAGTGATGTGCAAGTCTTTACCCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR TCA 90 bp CACATCACTGACAGGCGGCTCGGAGTCAGCCTTGGAGTCGGCCTTCCATGCCCACTTGGGCCACGCCGATaGCCTCAGGCCCCACTAACA +
Preference number: 4 (lower is better)
Translates to: HITDRRLGVSLGVGLPCPLGPRR*PQAPLT
Trigger: TGTTAGTGGGGCCTGAGGTCATCGGCGTGGCCCAAG...TGGGCATGGAAGGCCGACTCCAAGGCTGACTCCGAGCCGCCTGTCAGTGATGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp GAAGGTTTTGGCCAAACCTGCATCCACCACCTTGGCATGCCAACGCATTCGAGGATGGGCCGCGCCGCCTaGACCCAGAGCGCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: EGFGQTCIHHLGMPTHSRMGRAA*TQSASS
Trigger: GCTGCTGGCGCTCTGGGTGCAGGCGGCGCGGCCCAT...CCTCGAATGCGTTGGCATGCCAAGGTGGTGGATGCAGGTTTGGCCAAAACCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp CCACTGCCCCAAGCCTCTCTGCCGGCGTGGCTCTCCCCCAACCTCACTCTCAATACTCCCCAGGCACGGTaGATCCCCCGTGGAGCAAAT +
Preference number: 4 (lower is better)
Translates to: PLPQASLPAWLSPNLTLNTPQAR*IPRGAN
Trigger: ATTTGCTCCACGGGGGATGCACCGTGCCTGGGGAGT...ATTGAGAGTGAGGTTGGGGGAGAGCCACGCCGGCAGAGAGGCTTGGGGCAGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp CCACTGCCCCAAGCCTCTCTGCCGGCGTGGCTCTCCCCCAACCTCACTCTCAATCCTTCTCACAGTTCCTaGCCGAGTAGCCGTCAGGGC +
Preference number: 4 (lower is better)
Translates to: PLPQASLPAWLSPNLTLNPSHSS*PSSRQG
Trigger: GCCCTGACGGCTACTCGGGCAGGAACTGTGAGAAGG...ATTGAGAGTGAGGTTGGGGGAGAGCCACGCCGGCAGAGAGGCTTGGGGCAGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp GCACTTGTCACGAGCTTCAATACTGCCGCCGTCCCAGGATGGGAGAACTGCGCACCTGGTCCACACAGGTaGCACCGGCCGCACACGGGT +
Preference number: 4 (lower is better)
Translates to: ALVTSFNTAAVPGWENCAPGPHR*HRPHTG
Trigger: ACCCGTGTGCGGCCGGTGGCACCTGTGTGGACCAGG...TGCGCAGTTCTCCCATCCTGGGACGGCGGCAGTATTGAAGCTCGTGACAAGTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp CACGGGTCCCACCAACAGCCATGGGCCACACCAACACAGCCATGGGTCTCACCGCGTTCACCAGGTCCTTaGAGGTGCCCCCATGCTGAC +
Preference number: 4 (lower is better)
Translates to: HGSHQQPWATPTQPWVSPRSPGP*RCPHAD
Trigger: GTCAGCATGGGGGCACCTGCAAGGACCTGGTGAACG...CGGTGAGACCCATGGCTGTGTTGGTGTGGCCCATGGCTGTTGGTGGGACCCGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp CCACTGCCCCAAGCCTCTCTGCCGGCGTGGCTCTCCCCCAACCTCACTCTCAATCCTCATCGATGCATGTaGCCCCATTGCGGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: PLPQASLPAWLSPNLTLNPHRCM*PHCGRA
Trigger: AGCCCTGCCGCAATGGGGGCACATGCATCGATGAGG...ATTGAGAGTGAGGTTGGGGGAGAGCCACGCCGGCAGAGAGGCTTGGGGCAGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp GCCACGGGTCCCACCAACAGCCATGGGCCACACCAACACAGCCATGGGTCTCACCGTCCACCTCATCGATaGATGTGCCCCCATTGCGGC +
Preference number: 4 (lower is better)
Translates to: ATGPTNSHGPHQHSHGSHRPPHR*MCPHCG
Trigger: GCCGCAATGGGGGCACATGCATCGATGAGGTGGACG...GTGAGACCCATGGCTGTGTTGGTGTGGCCCATGGCTGTTGGTGGGACCCGTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp TGCGCAGCAGGAAGGGCACTTCTGAAAGCACAGTGGAGAGATCGCTGGAGCGGGCCCCGCGAAGCCAGGTaGACACTCGCAGCGGAACCA +
Preference number: 4 (lower is better)
Translates to: CAAGRALLKAQWRDRWSGPREAR*TLAAEP
Trigger: TGGTTCCGCTGCGAGTGTGCACCTGGCTTCGCGGGG...CCCGCTCCAGCGATCTCTCCACTGTGCTTTCAGAAGTGCCCTTCCTGCTGCGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp AATACTGCCGCCGTCCCAGGATGGGAGAACTGCGCAGCAGGAAGGGCACTTCTGCGTGTGGGAACGGAGTaGCCCGGGACCAGCAGGATC +
Preference number: 4 (lower is better)
Translates to: NTAAVPGWENCAAGRALLRVGTE*PGTSRI
Trigger: GATCCTGCTGGTCCCGGGGCACTCCGTTCCCACACG...CAGAAGTGCCCTTCCTGCTGCGCAGTTCTCCCATCCTGGGACGGCGGCAGTATT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp GGGGCCGGCAGGTGGGCAGCGCCTGGTGCCACGGCACGCGTGGACAGTTGCGAGAAAATAAAGAAACTATaGACATGGCCTCGGCCTCCG +
Preference number: 4 (lower is better)
Translates to: GAGRWAAPGATARVDSCEKIKKL*TWPRPP
Trigger: CGGAGGCCGAGGCCATGTGCATAGTTTCTTTATTTT...CTCGCAACTGTCCACGCGTGCCGTGGCACCAGGCGCTGCCCACCTGCCGGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp GCCGGCGTGGCTCTCCCCCAACCTCACTCTCAATACAAAAGGGACAGCACCGAAAACAGCCACGGGCCGTaGCGGCAGCCAGGGCCACAT +
Preference number: 4 (lower is better)
Translates to: AGVALPQPHSQYKRDSTENSHGP*RQPGPH
Trigger: ATGTGGCCCTGGCTGCCGGCACGGCCCGTGGCTGTT...TTCGGTGCTGTCCCTTTTGTATTGAGAGTGAGGTTGGGGGAGAGCCACGCCGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp CAGCAGGGTAAAGACTTGCACATCACTGACAGGCGGCTCGGAGTCAGCCTTGGACAGCACGCGCCCCACTaGCCCAAGCCTCTCTGCCGG +
Preference number: 4 (lower is better)
Translates to: QQGKDLHITDRRLGVSLGQHAPH*PKPLCR
Trigger: CCGGCAGAGAGGCTTGGGGCAGTGGGGCGCGTGCTG...TCCAAGGCTGACTCCGAGCCGCCTGTCAGTGATGTGCAAGTCTTTACCCTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp AATACTGCCGCCGTCCCAGGATGGGAGAACTGCGCAGCAGGAAGGGCACTTCTGTGCACGTGCCTCCGTTaGTGCAGGGGTGGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: NTAAVPGWENCAAGRALLCTCLR*CRGGGC
Trigger: GCAGCCACCACCCCTGCACCAACGGAGGCACGTGCA...CAGAAGTGCCCTTCCTGCTGCGCAGTTCTCCCATCCTGGGACGGCGGCAGTATT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp TTGGCCAAACCTGCATCCACCACCTTGGCATGCCAACGCATTCGAGGCCCTGGCCCGGACGGCACCTCATaGCAAGAGCCCCCGTTGGCA +
Preference number: 4 (lower is better)
Translates to: LAKPASTTLACQRIRGPGPDGTS*QEPPLA
Trigger: TGCCAACGGGGGCTCTTGCCATGAGGTGCCGTCCGG...GCCAGGGCCTCGAATGCGTTGGCATGCCAAGGTGGTGGATGCAGGTTTGGCCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp TTGCACATCACTGACAGGCGGCTCGGAGTCAGCCTTGGAGTCGGCCTTCCATGCTCATTGGCGTCCAGCTaGCAGGTGGCCCCCACCCAC +
Preference number: 4 (lower is better)
Translates to: LHITDRRLGVSLGVGLPCSLASS*QVAPTH
Trigger: GTGGGTGGGGGCCACCTGCCAGCTGGACGCCAATGA...GCATGGAAGGCCGACTCCAAGGCTGACTCCGAGCCGCCTGTCAGTGATGTGCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331782.8
CDS-3UTR CCA 90 bp GTTGCGAGGGGTCTGTGTGAAGGCACTTGTCACGAGCTTCAATACTGCCGCCGTCAGAGGCCGCCGCTGTaGCAGGGGCTGCTGGCACAC +
Preference number: 4 (lower is better)
Translates to: VARGLCEGTCHELQYCRRQRPPL*QGLLAH
Trigger: GTGTGCCAGCAGCCCCTGCCACAGCGGCGGCCTCTG...ACGGCGGCAGTATTGAAGCTCGTGACAAGTGCCTTCACACAGACCCCTCGCAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp GCACTTGTCACGAGCTTCAATACTGCCGCCGTCCCAGGATGGGAGAACTGCGCAAAGCCCTGGGGGCAGTaGCAGTGGAAGCCGTCGGCC +
Preference number: 4 (lower is better)
Translates to: ALVTSFNTAAVPGWENCAKPWGQ*QWKPSA
Trigger: GGCCGACGGCTTCCACTGCCACTGCCCCCAGGGCTT...TGCGCAGTTCTCCCATCCTGGGACGGCGGCAGTATTGAAGCTCGTGACAAGTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp ACGCCGATGACCTCAGGCCCCACTAACAACCACAGGTGCGTCAACAGCCACGGGGGAAAAGTTGCCCCCTaGCTGGCTGACGCAGCGTCC +
Preference number: 4 (lower is better)
Translates to: TPMTSGPTNNHRCVNSHGGKVAP*LADAAS
Trigger: GGACGCTGCGTCAGCCAGCCAGGGGGCAACTTTTCC...CCCGTGGCTGTTGACGCACCTGTGGTTGTTAGTGGGGCCTGAGGTCATCGGCGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp AAGGTTTTGGCCAAACCTGCATCCACCACCTTGGCATGCCAACGCATTCGAGGCTGCCCCAGTGGGCACTaGGCGCTCAGGGCCTCGGGC +
Preference number: 4 (lower is better)
Translates to: KVLAKPASTTLACQRIRGCPSGH*ALRASG
Trigger: GCCCGAGGCCCTGAGCGCCCAGTGCCCACTGGGGCA...GCCTCGAATGCGTTGGCATGCCAAGGTGGTGGATGCAGGTTTGGCCAAAACCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp ACCCCTCACAGCAGGGTAAAGACTTGCACATCACTGACAGGCGGCTCGGAGTCAGCGTGGGCCGCGCCCTaGATCAGGCTGCTGTCAGGC +
Preference number: 4 (lower is better)
Translates to: TPHSRVKTCTSLTGGSESAWAAP*IRLLSG
Trigger: GCCTGACAGCAGCCTGATCCAGGGCGCGGCCCACGC...TGACTCCGAGCCGCCTGTCAGTGATGTGCAAGTCTTTACCCTGCTGTGAGGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp CAGCAGGGTAAAGACTTGCACATCACTGACAGGCGGCTCGGAGTCAGCCTTGGAGCGTGGGCCGCGCCCTaGATCAGGCTGCTGTCAGGC +
Preference number: 4 (lower is better)
Translates to: QQGKDLHITDRRLGVSLGAWAAP*IRLLSG
Trigger: GCCTGACAGCAGCCTGATCCAGGGCGCGGCCCACGC...TCCAAGGCTGACTCCGAGCCGCCTGTCAGTGATGTGCAAGTCTTTACCCTGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp ACCTCCTACCCCTCACAGCAGGGTAAAGACTTGCACATCACTGACAGGCGGCTCGTCCGGCAGACGGCATaGCTCCCACCGAGGGCCCTG +
Preference number: 4 (lower is better)
Translates to: TSYPSQQGKDLHITDRRLVRQTA*LPPRAL
Trigger: CAGGGCCCTCGGTGGGAGCCATGCCGTCTGCCGGAC...GAGCCGCCTGTCAGTGATGTGCAAGTCTTTACCCTGCTGTGAGGGGTAGGAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp TTGGCCAAACCTGCATCCACCACCTTGGCATGCCAACGCATTCGAGGCCCTGGCGCCGCCGTCCCAGGATaGGAGAACTGCGCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: LAKPASTTLACQRIRGPGAAVPG*ENCAAG
Trigger: TCCTGCTGCGCAGTTCTCCCATCCTGGGACGGCGGC...GCCAGGGCCTCGAATGCGTTGGCATGCCAAGGTGGTGGATGCAGGTTTGGCCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp GTTTTGGCCAAACCTGCATCCACCACCTTGGCATGCCAACGCATTCGAGGCCCTCAGGTGGGCAGCGCCTaGTGCCACGGCACGCGTGGA +
Preference number: 4 (lower is better)
Translates to: VLAKPASTTLACQRIRGPQVGSA*CHGTRG
Trigger: TCCACGCGTGCCGTGGCACCAGGCGCTGCCCACCTG...AGGGCCTCGAATGCGTTGGCATGCCAAGGTGGTGGATGCAGGTTTGGCCAAAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR TCA 90 bp GTTGCGAGGGGTCTGTGTGAAGGCACTTGTCACGAGCTTCAATACTGCCGCCGTGCGCCACGTGGCCGCTaGAGTGCAGGCTCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: VARGLCEGTCHELQYCRRAPRGR*SAGSSS
Trigger: GCTGGAAGAGCCTGCACTTCAGCGGCCACGTGGCGC...ACGGCGGCAGTATTGAAGCTCGTGACAAGTGCCTTCACACAGACCCCTCGCAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR TCA 90 bp AATACTGCCGCCGTCCCAGGATGGGAGAACTGCGCAGCAGGAAGGGCACTTCTGTGCGCGGCGGCGGCGTaGAGTTCTTGCACTGGTAGA +
Preference number: 4 (lower is better)
Translates to: NTAAVPGWENCAAGRALLCAAAA*SSCTGR
Trigger: TCTACCAGTGCAAGAACTTCACGCCGCCGCCGCGCA...CAGAAGTGCCCTTCCTGCTGCGCAGTTCTCCCATCCTGGGACGGCGGCAGTATT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp CGCCCTCTACAGCCACCACAGCCACGTGGGCCAATACCCAGCACGCGCCCCACTGCCGGCAGAACTTGTTaGAAGTGGCGCTGTAGTAGT +
Preference number: 4 (lower is better)
Translates to: RPLQPPQPRGPIPSTRPTAGRTC*KWRCSS
Trigger: ACTACTACAGCGCCACTTGCAACAAGTTCTGCCGGC...AGTGGGGCGCGTGCTGGGTATTGGCCCACGTGGCTGTGGTGGCTGTAGAGGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp TTGGCCAAACCTGCATCCACCACCTTGGCATGCCAACGCATTCGAGGCCCTGGCCCAGGTCCTTGCAGGTaGCCCCATGCTGACACTGCC +
Preference number: 4 (lower is better)
Translates to: LAKPASTTLACQRIRGPGPGPCR*PHADTA
Trigger: GGCAGTGTCAGCATGGGGGCACCTGCAAGGACCTGG...GCCAGGGCCTCGAATGCGTTGGCATGCCAAGGTGGTGGATGCAGGTTTGGCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp CACATCACTGACAGGCGGCTCGGAGTCAGCCTTGGAGTCGGCCTTCCATGCCCACCTCATCGATGCATGTaGCCCCATTGCGGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: HITDRRLGVSLGVGLPCPPHRCM*PHCGRA
Trigger: AGCCCTGCCGCAATGGGGGCACATGCATCGATGAGG...TGGGCATGGAAGGCCGACTCCAAGGCTGACTCCGAGCCGCCTGTCAGTGATGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp ACGCCGATGACCTCAGGCCCCACTAACAACCACAGGTGCGTCAACAGCCACGGGAGCAGGTGCCACCGTTaGTGCAGGTGTAGGCATCGC +
Preference number: 4 (lower is better)
Translates to: TPMTSGPTNNHRCVNSHGSRCHR*CRCRHR
Trigger: GCGATGCCTACACCTGCAGCAACGGTGGCACCTGCT...CCCGTGGCTGTTGACGCACCTGTGGTTGTTAGTGGGGCCTGAGGTCATCGGCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp GATTTGGTGACGACGCAGACACCCTTTGCTCTCTCCTTTCATACAGCGAGTGCCTGGCGACGGCGCAGGTaGTGCCCTTCCAGCCGGGGG +
Preference number: 4 (lower is better)
Translates to: DLVTTQTPFALSFHTASAWRRRR*CPSSRG
Trigger: CCCCCGGCTGGAAGGGCAGCACCTGCGCCGTCGCCA...GGCACTCGCTGTATGAAAGGAGAGAGCAAAGGGTGTCTGCGTCGTCACCAAATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp ACCCCTCACAGCAGGGTAAAGACTTGCACATCACTGACAGGCGGCTCGGAGTCAGTGGCAGGCAGGGGGTaGTCGGTGGCTCTTCTGCGC +
Preference number: 4 (lower is better)
Translates to: TPHSRVKTCTSLTGGSESVAGRG*SVALLR
Trigger: GCGCAGAAGAGCCACCGAGCACCCCCTGCCTGCCAC...TGACTCCGAGCCGCCTGTCAGTGATGTGCAAGTCTTTACCCTGCTGTGAGGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp GTTGCGAGGGGTCTGTGTGAAGGCACTTGTCACGAGCTTCAATACTGCCGCCGTGCCGCCCCTACTCCTTaGCGGCGTAGCGGGCCTCAT +
Preference number: 4 (lower is better)
Translates to: VARGLCEGTCHELQYCRRAAPTP*RRSGPH
Trigger: ATGAGGCCCGCTACGCCGGCAAGGAGTAGGGGCGGC...ACGGCGGCAGTATTGAAGCTCGTGACAAGTGCCTTCACACAGACCCCTCGCAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp ACCTCCTACCCCTCACAGCAGGGTAAAGACTTGCACATCACTGACAGGCGGCTCAACAGCCACGGGCCGTaGCGGCAGCCAGGGCCACAT +
Preference number: 4 (lower is better)
Translates to: TSYPSQQGKDLHITDRRLNSHGP*RQPGPH
Trigger: ATGTGGCCCTGGCTGCCGGCACGGCCCGTGGCTGTT...GAGCCGCCTGTCAGTGATGTGCAAGTCTTTACCCTGCTGTGAGGGGTAGGAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp ACCCCTCACAGCAGGGTAAAGACTTGCACATCACTGACAGGCGGCTCGGAGTCAAGCGCGAGGTTGACCTaGCAGCCTTGGGCCACGCCG +
Preference number: 4 (lower is better)
Translates to: TPHSRVKTCTSLTGGSESSARLT*QPWATP
Trigger: CGGCGTGGCCCAAGGCTGGCAGGTCAACCTCGCGCT...TGACTCCGAGCCGCCTGTCAGTGATGTGCAAGTCTTTACCCTGCTGTGAGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp GGGGCCGGCAGGTGGGCAGCGCCTGGTGCCACGGCACGCGTGGACAGTTGCGAGACACATTTACAAAAATaGACTTTCACGAGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: GAGRWAAPGATARVDSCETHLQK*TFTRRG
Trigger: GCCCCTCCTCGTGAAAGTGCATTTTTGTAAATGTGT...CTCGCAACTGTCCACGCGTGCCGTGGCACCAGGCGCTGCCCACCTGCCGGCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp ACCTCCTACCCCTCACAGCAGGGTAAAGACTTGCACATCACTGACAGGCGGCTCTGCCCCAAGCCTCTCTaGCGGCGTGGCTCTCCCCCA +
Preference number: 4 (lower is better)
Translates to: TSYPSQQGKDLHITDRRLCPKPL*RRGSPP
Trigger: TGGGGGAGAGCCACGCCGGCAGAGAGGCTTGGGGCA...GAGCCGCCTGTCAGTGATGTGCAAGTCTTTACCCTGCTGTGAGGGGTAGGAGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp ACGCCGATGACCTCAGGCCCCACTAACAACCACAGGTGCGTCAACAGCCACGGGTTAGTCAGGGTCGGGTaGCAGGCACCTAGACACCCC +
Preference number: 4 (lower is better)
Translates to: TPMTSGPTNNHRCVNSHGLVRVG*QAPRHP
Trigger: GGGGTGTCTAGGTGCCTGGCACCCGACCCTGACTAA...CCCGTGGCTGTTGACGCACCTGTGGTTGTTAGTGGGGCCTGAGGTCATCGGCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp ACGCCGATGACCTCAGGCCCCACTAACAACCACAGGTGCGTCAACAGCCACGGGGCCAGGTGGAAGGGCTaGTTCTCTCCTGCCTCCATC +
Preference number: 4 (lower is better)
Translates to: TPMTSGPTNNHRCVNSHGARWKG*FSPASI
Trigger: GATGGAGGCAGGAGAGAAGCAGCCCTTCCACCTGGC...CCCGTGGCTGTTGACGCACCTGTGGTTGTTAGTGGGGCCTGAGGTCATCGGCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp CAGCAGGGTAAAGACTTGCACATCACTGACAGGCGGCTCGGAGTCAGCCTTGGAAGCTGCAGGGCCCCGTaGGCGTCACCTTGGCCTGGT +
Preference number: 4 (lower is better)
Translates to: QQGKDLHITDRRLGVSLGSCRAP*ASPWPG
Trigger: ACCAGGCCAAGGTGACGCCCACGGGGCCCTGCAGCT...TCCAAGGCTGACTCCGAGCCGCCTGTCAGTGATGTGCAAGTCTTTACCCTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp CACGGGTCCCACCAACAGCCATGGGCCACACCAACACAGCCATGGGTCTCACCGGCTCCTCATTCGGGGTaGTATCGTTGTCCCAGTCCC +
Preference number: 4 (lower is better)
Translates to: HGSHQQPWATPTQPWVSPAPHSG*YRCPSP
Trigger: GGGACTGGGACAACGATACCACCCCGAATGAGGAGC...CGGTGAGACCCATGGCTGTGTTGGTGTGGCCCATGGCTGTTGGTGGGACCCGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp TGCGCAGCAGGAAGGGCACTTCTGAAAGCACAGTGGAGAGATCGCTGGAGCGGGCGTTGGCACACGGGTTaGAGGTGCAGGCGTGCTCAG +
Preference number: 4 (lower is better)
Translates to: CAAGRALLKAQWRDRWSGRWHTG*RCRRAQ
Trigger: CTGAGCACGCCTGCACCTCCAACCCGTGTGCCAACG...CCCGCTCCAGCGATCTCTCCACTGTGCTTTCAGAAGTGCCCTTCCTGCTGCGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp TGCGCAGCAGGAAGGGCACTTCTGAAAGCACAGTGGAGAGATCGCTGGAGCGGGAAGTTGCCCCCTGGCTaGCTGACGCAGCGTCCATGG +
Preference number: 4 (lower is better)
Translates to: CAAGRALLKAQWRDRWSGKLPPG*LTQRPW
Trigger: CCATGGACGCTGCGTCAGCCAGCCAGGGGGCAACTT...CCCGCTCCAGCGATCTCTCCACTGTGCTTTCAGAAGTGCCCTTCCTGCTGCGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp AAGGTTTTGGCCAAACCTGCATCCACCACCTTGGCATGCCAACGCATTCGAGGCCAGCGGCCGCGGCTGTaGCAGGGATCGGGAAGGCAG +
Preference number: 4 (lower is better)
Translates to: KVLAKPASTTLACQRIRGQRPRL*QGSGRQ
Trigger: CTGCCTTCCCGATCCCTGCCACAGCCGCGGCCGCTG...GCCTCGAATGCGTTGGCATGCCAAGGTGGTGGATGCAGGTTTGGCCAAAACCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp GCCACGGGTCCCACCAACAGCCATGGGCCACACCAACACAGCCATGGGTCTCACGCACAGGGCGAGGACTaGCACTCGTCGATGTTGATG +
Preference number: 4 (lower is better)
Translates to: ATGPTNSHGPHQHSHGSHAQGED*HSSMLM
Trigger: CATCAACATCGACGAGTGCCAGTCCTCGCCCTGTGC...GTGAGACCCATGGCTGTGTTGGTGTGGCCCATGGCTGTTGGTGGGACCCGTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp AGCAGGGTAAAGACTTGCACATCACTGACAGGCGGCTCGGAGTCAGCCTTGGAGAACCCGATCACTTCCTaGCACCGGGGGCCGGCTCGG +
Preference number: 4 (lower is better)
Translates to: SRVKTCTSLTGGSESALENPITS*HRGPAR
Trigger: CCGAGCCGGCCCCCGGTGCCAGGAAGTGATCGGGTT...CTCCAAGGCTGACTCCGAGCCGCCTGTCAGTGATGTGCAAGTCTTTACCCTGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp ACCCCTCACAGCAGGGTAAAGACTTGCACATCACTGACAGGCGGCTCGGAGTCAGCAGGGGGTGCTCGGTaGCTCTTCTGCGCCGCACTC +
Preference number: 4 (lower is better)
Translates to: TPHSRVKTCTSLTGGSESAGGAR*LFCAAL
Trigger: GAGTGCGGCGCAGAAGAGCCACCGAGCACCCCCTGC...TGACTCCGAGCCGCCTGTCAGTGATGTGCAAGTCTTTACCCTGCTGTGAGGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp AGCAGGGTAAAGACTTGCACATCACTGACAGGCGGCTCGGAGTCAGCCTTGGAGCCCACCGTGGTGCCCTaGGGCACGTGGTCACGGTTG +
Preference number: 4 (lower is better)
Translates to: SRVKTCTSLTGGSESALEPTVVP*GTWSRL
Trigger: CAACCGTGACCACGTGCCCCAGGGCACCACGGTGGG...CTCCAAGGCTGACTCCGAGCCGCCTGTCAGTGATGTGCAAGTCTTTACCCTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp GCACTTGTCACGAGCTTCAATACTGCCGCCGTCCCAGGATGGGAGAACTGCGCAGGATCCCGGAGCAAATaGCGCCCACCGTGGTGCCCT +
Preference number: 4 (lower is better)
Translates to: ALVTSFNTAAVPGWENCAGSRSK*RPPWCP
Trigger: AGGGCACCACGGTGGGCGCCATTTGCTCCGGGATCC...TGCGCAGTTCTCCCATCCTGGGACGGCGGCAGTATTGAAGCTCGTGACAAGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp AAGGTTTTGGCCAAACCTGCATCCACCACCTTGGCATGCCAACGCATTCGAGGCGGGTCCCGGCCCAGCTaGCAGCCGCCCCTACTCCTT +
Preference number: 4 (lower is better)
Translates to: KVLAKPASTTLACQRIRGGSRPS*QPPLLL
Trigger: AAGGAGTAGGGGCGGCTGCCAGCTGGGCCGGGACCC...GCCTCGAATGCGTTGGCATGCCAAGGTGGTGGATGCAGGTTTGGCCAAAACCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp GCACTTGTCACGAGCTTCAATACTGCCGCCGTCCCAGGATGGGAGAACTGCGCAGCCACCACAGCCACGTaGGCCAATACCCAGCACGCG +
Preference number: 4 (lower is better)
Translates to: ALVTSFNTAAVPGWENCAATTAT*ANTQHA
Trigger: CGCGTGCTGGGTATTGGCCCACGTGGCTGTGGTGGC...TGCGCAGTTCTCCCATCCTGGGACGGCGGCAGTATTGAAGCTCGTGACAAGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
3UTR CAA 72 bp CCCAGGAAGGTTTTGGCCAAACCTGCATCCACCACCTaGGCATGCCAACGCATTCGAGGCCCTGGCAGGCCC +
Preference number: 4 (lower is better)
Translates to: PRKVLAKPASTT*ACQRIRGPGRP
Trigger: GGGCCTGCCAGGGCCTCGAATGCGTTGGCATGCCAAGGTGGTGGATGCAGGTTTGGCCAAAACCTTCCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR TCA 90 bp CAACCTCACTCTCAATACAAAAGGGACAGCACCGAAAGAACAAGGGAGGCCGGATGCCCCCTGGCTGGCTaGCGCAGCGTCCATGGGGGC +
Preference number: 4 (lower is better)
Translates to: QPHSQYKRDSTERTREAGCPLAG*RSVHGG
Trigger: GCCCCCATGGACGCTGCGTCAGCCAGCCAGGGGGCA...TCCGGCCTCCCTTGTTCTTTCGGTGCTGTCCCTTTTGTATTGAGAGTGAGGTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR TCA 90 bp TTGGCCAAACCTGCATCCACCACCTTGGCATGCCAACGCATTCGAGGCCCTGGCGCACTGGAACTCGCGTaGGTGGCAGGTCTTGCCCTT +
Preference number: 4 (lower is better)
Translates to: LAKPASTTLACQRIRGPGALELA*VAGLAL
Trigger: AAGGGCAAGACCTGCCACTCACGCGAGTTCCAGTGC...GCCAGGGCCTCGAATGCGTTGGCATGCCAAGGTGGTGGATGCAGGTTTGGCCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR TCA 90 bp AGCAGGGTAAAGACTTGCACATCACTGACAGGCGGCTCGGAGTCAGCCTTGGAGGACAGCCAGGAGCAGTaGGCTGTTCCCCCGCTGGGT +
Preference number: 4 (lower is better)
Translates to: SRVKTCTSLTGGSESALEDSQEQ*AVPPLG
Trigger: ACCCAGCGGGGGAACAGCTCACTGCTCCTGGCTGTC...CTCCAAGGCTGACTCCGAGCCGCCTGTCAGTGATGTGCAAGTCTTTACCCTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR TCA 90 bp GTTTTGGCCAAACCTGCATCCACCACCTTGGCATGCCAACGCATTCGAGGCCCTGGTTGCGGATGGGGTTaGGCGGGGCCCACTGGTTGT +
Preference number: 4 (lower is better)
Translates to: VLAKPASTTLACQRIRGPGCGWG*AGPTGC
Trigger: ACAACCAGTGGGCCCCGCTCAACCCCATCCGCAACC...AGGGCCTCGAATGCGTTGGCATGCCAAGGTGGTGGATGCAGGTTTGGCCAAAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR TCA 90 bp GCACTTGTCACGAGCTTCAATACTGCCGCCGTCCCAGGATGGGAGAACTGCGCAAGCCACAGGTCCCATTaGCAGCCACGAGTCCCACCG +
Preference number: 4 (lower is better)
Translates to: ALVTSFNTAAVPGWENCASHRSH*QPRVPP
Trigger: CGGTGGGACTCGTGGCTGTCAATGGGACCTGTGGCT...TGCGCAGTTCTCCCATCCTGGGACGGCGGCAGTATTGAAGCTCGTGACAAGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR TCA 90 bp AGCAGGGTAAAGACTTGCACATCACTGACAGGCGGCTCGGAGTCAGCCTTGGAGCAGCAAGCGCGAGGTTaGCCTGCCAGCCTTGGGCCA +
Preference number: 4 (lower is better)
Translates to: SRVKTCTSLTGGSESALEQQARG*PASLGP
Trigger: TGGCCCAAGGCTGGCAGGTCAACCTCGCGCTTGCTG...CTCCAAGGCTGACTCCGAGCCGCCTGTCAGTGATGTGCAAGTCTTTACCCTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp ACGCCGATGACCTCAGGCCCCACTAACAACCACAGGTGCGTCAACAGCCACGGGGGCCGAAAAAGTCGTTaGGGGGCCGGCAGAACTTGT +
Preference number: 4 (lower is better)
Translates to: TPMTSGPTNNHRCVNSHGGRKSR*GAGRTC
Trigger: ACAAGTTCTGCCGGCCCCGCAACGACTTTTTCGGCC...CCCGTGGCTGTTGACGCACCTGTGGTTGTTAGTGGGGCCTGAGGTCATCGGCGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp TTGGCCAAACCTGCATCCACCACCTTGGCATGCCAACGCATTCGAGGCCCTGGCCACACGGGTTGGAGGTaGAGGCGTGCTCAGCCTTCT +
Preference number: 4 (lower is better)
Translates to: LAKPASTTLACQRIRGPGHTGWR*RRAQPS
Trigger: AGAAGGCTGAGCACGCCTGCACCTCCAACCCGTGTG...GCCAGGGCCTCGAATGCGTTGGCATGCCAAGGTGGTGGATGCAGGTTTGGCCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp ACCCCTCACAGCAGGGTAAAGACTTGCACATCACTGACAGGCGGCTCGGAGTCAGTGGCCCCCACCCACTaGTCGGGGCAGATGCACTCA +
Preference number: 4 (lower is better)
Translates to: TPHSRVKTCTSLTGGSESVAPTH*SGQMHS
Trigger: TGAGTGCATCTGCCCCGAGCAGTGGGTGGGGGCCAC...TGACTCCGAGCCGCCTGTCAGTGATGTGCAAGTCTTTACCCTGCTGTGAGGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp ACCTCCTACCCCTCACAGCAGGGTAAAGACTTGCACATCACTGACAGGCGGCTCCGTTCCAGCTCGCAATaGCGGCCTCCGAAGCCCCGT +
Preference number: 4 (lower is better)
Translates to: TSYPSQQGKDLHITDRRLRSSSQ*RPPKPR
Trigger: ACGGGGCTTCGGAGGCCGGCATTGCGAGCTGGAACG...GAGCCGCCTGTCAGTGATGTGCAAGTCTTTACCCTGCTGTGAGGGGTAGGAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp AGCAGGGTAAAGACTTGCACATCACTGACAGGCGGCTCGGAGTCAGCCTTGGAGACACACGCCGGAGGCTaGTGTGCCAGGCATCCCAGG +
Preference number: 4 (lower is better)
Translates to: SRVKTCTSLTGGSESALETHAGG*CARHPR
Trigger: CCTGGGATGCCTGGCACAGCAGCCTCCGGCGTGTGT...CTCCAAGGCTGACTCCGAGCCGCCTGTCAGTGATGTGCAAGTCTTTACCCTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp CAGCAGGGTAAAGACTTGCACATCACTGACAGGCGGCTCGGAGTCAGCCTTGGAACACACGCCGGAGGCTaGTGTGCCAGGCATCCCAGG +
Preference number: 4 (lower is better)
Translates to: QQGKDLHITDRRLGVSLGTHAGG*CARHPR
Trigger: CCTGGGATGCCTGGCACAGCAGCCTCCGGCGTGTGT...TCCAAGGCTGACTCCGAGCCGCCTGTCAGTGATGTGCAAGTCTTTACCCTGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp ACCTCCTACCCCTCACAGCAGGGTAAAGACTTGCACATCACTGACAGGCGGCTCGGTTGGGCAGGCAGCTaGTGTTCTTGGCGACGGCGC +
Preference number: 4 (lower is better)
Translates to: TSYPSQQGKDLHITDRRLGWAGS*CSWRRR
Trigger: GCGCCGTCGCCAAGAACAGCAGCTGCCTGCCCAACC...GAGCCGCCTGTCAGTGATGTGCAAGTCTTTACCCTGCTGTGAGGGGTAGGAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp GTTGCGAGGGGTCTGTGTGAAGGCACTTGTCACGAGCTTCAATACTGCCGCCGTGGTTGGGCAGGCAGCTaGTGTTCTTGGCGACGGCGC +
Preference number: 4 (lower is better)
Translates to: VARGLCEGTCHELQYCRRGWAGS*CSWRRR
Trigger: GCGCCGTCGCCAAGAACAGCAGCTGCCTGCCCAACC...ACGGCGGCAGTATTGAAGCTCGTGACAAGTGCCTTCACACAGACCCCTCGCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp AACTGCGCAGCAGGAAGGGCACTTCTGAAAGCACAGTGGAGAGATCGCTGGAGCAGAAGGAGGCCCCGCTaGCCACGCAGGTGCCACCAT +
Preference number: 4 (lower is better)
Translates to: NCAAGRALLKAQWRDRWSRRRPR*PRRCHH
Trigger: ATGGTGGCACCTGCGTGGGCAGCGGGGCCTCCTTCT...GCTCCAGCGATCTCTCCACTGTGCTTTCAGAAGTGCCCTTCCTGCTGCGCAGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp CGCCCTCTACAGCCACCACAGCCACGTGGGCCAATACCCAGCACGCGCCCCACTAGCAAGGCAGAGGGTTaGAGTCGTTGGTATTGTGAG +
Preference number: 4 (lower is better)
Translates to: RPLQPPQPRGPIPSTRPTSKAEG*SRWYCE
Trigger: CTCACAATACCAACGACTGCAACCCTCTGCCTTGCT...AGTGGGGCGCGTGCTGGGTATTGGCCCACGTGGCTGTGGTGGCTGTAGAGGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp AAGGTTTTGGCCAAACCTGCATCCACCACCTTGGCATGCCAACGCATTCGAGGCGTGGCAGGCAGGGGGTaGTCGGTGGCTCTTCTGCGC +
Preference number: 4 (lower is better)
Translates to: KVLAKPASTTLACQRIRGVAGRG*SVALLR
Trigger: GCGCAGAAGAGCCACCGAGCACCCCCTGCCTGCCAC...GCCTCGAATGCGTTGGCATGCCAAGGTGGTGGATGCAGGTTTGGCCAAAACCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp ACCTCCTACCCCTCACAGCAGGGTAAAGACTTGCACATCACTGACAGGCGGCTCGGAGTCGGCCTTCCATaGCCAGCCCTGAGGCCACCA +
Preference number: 4 (lower is better)
Translates to: TSYPSQQGKDLHITDRRLGVGLP*PALRPP
Trigger: TGGTGGCCTCAGGGCTGGGCATGGAAGGCCGACTCC...GAGCCGCCTGTCAGTGATGTGCAAGTCTTTACCCTGCTGTGAGGGGTAGGAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp GTTGCGAGGGGTCTGTGTGAAGGCACTTGTCACGAGCTTCAATACTGCCGCCGTTCCAGGTGCGCCACGTaGCCGCTGAAGTGCAGGCTC +
Preference number: 4 (lower is better)
Translates to: VARGLCEGTCHELQYCRRSRCAT*PLKCRL
Trigger: GAGCCTGCACTTCAGCGGCCACGTGGCGCACCTGGA...ACGGCGGCAGTATTGAAGCTCGTGACAAGTGCCTTCACACAGACCCCTCGCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp AGCAGGGTAAAGACTTGCACATCACTGACAGGCGGCTCGGAGTCAGCCTTGGAGTGTCAAGGGCACAGGTaGGCCCGCTCCAGCCCGATG +
Preference number: 4 (lower is better)
Translates to: SRVKTCTSLTGGSESALECQGHR*ARSSPM
Trigger: CATCGGGCTGGAGCGGGCCCACCTGTGCCCTTGACA...CTCCAAGGCTGACTCCGAGCCGCCTGTCAGTGATGTGCAAGTCTTTACCCTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp TGCGCAGCAGGAAGGGCACTTCTGAAAGCACAGTGGAGAGATCGCTGGAGCGGGGGCAGTCGTTGGGATTaGTGTCGCAGAGCTCGCCCT +
Preference number: 4 (lower is better)
Translates to: CAAGRALLKAQWRDRWSGGSRWD*CRRARP
Trigger: AGGGCGAGCTCTGCGACACCAATCCCAACGACTGCC...CCCGCTCCAGCGATCTCTCCACTGTGCTTTCAGAAGTGCCCTTCCTGCTGCGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp CACATCACTGACAGGCGGCTCGGAGTCAGCCTTGGAGTCGGCCTTCCATGCCCACGGGAAGGCAGTCGTTaGGATTGGTGTCGCAGAGCT +
Preference number: 4 (lower is better)
Translates to: HITDRRLGVSLGVGLPCPREGSR*DWCRRA
Trigger: AGCTCTGCGACACCAATCCCAACGACTGCCTTCCCG...TGGGCATGGAAGGCCGACTCCAAGGCTGACTCCGAGCCGCCTGTCAGTGATGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp ACCTCCTACCCCTCACAGCAGGGTAAAGACTTGCACATCACTGACAGGCGGCTCCCAGGCCTCACAGGGTaGTCGCAGACACTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: TSYPSQQGKDLHITDRRLPGLTG*SQTLAW
Trigger: CCAGGCCAGTGTCTGCGACCACCCTGTGAGGCCTGG...GAGCCGCCTGTCAGTGATGTGCAAGTCTTTACCCTGCTGTGAGGGGTAGGAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp CAGCAGGGTAAAGACTTGCACATCACTGACAGGCGGCTCGGAGTCAGCCTTGGAAAATGGCGCCCACCGTaGTGCCCTGGGGCACGTGGT +
Preference number: 4 (lower is better)
Translates to: QQGKDLHITDRRLGVSLGKWRPP*CPGARG
Trigger: ACCACGTGCCCCAGGGCACCACGGTGGGCGCCATTT...TCCAAGGCTGACTCCGAGCCGCCTGTCAGTGATGTGCAAGTCTTTACCCTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp AGCAGGGTAAAGACTTGCACATCACTGACAGGCGGCTCGGAGTCAGCCTTGGAGGTGCCACAGCCCTTGTaGCTGGCAGGGAGCGGATCC +
Preference number: 4 (lower is better)
Translates to: SRVKTCTSLTGGSESALEVPQPL*LAGSGS
Trigger: GGATCCGCTCCCTGCCAGCCACAAGGGCTGTGGCAC...CTCCAAGGCTGACTCCGAGCCGCCTGTCAGTGATGTGCAAGTCTTTACCCTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp GATTTGGTGACGACGCAGACACCCTTTGCTCTCTCCTTTCATACAGCGAGTGCCCCACCTCCACAGCACTaGCCCCCGAGGACGCCCGGT +
Preference number: 4 (lower is better)
Translates to: DLVTTQTPFALSFHTASAPPPQH*PPRTPG
Trigger: ACCGGGCGTCCTCGGGGGCCAGTGCTGTGGAGGTGG...GGCACTCGCTGTATGAAAGGAGAGAGCAAAGGGTGTCTGCGTCGTCACCAAATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp GAAGGTTTTGGCCAAACCTGCATCCACCACCTTGGCATGCCAACGCATTCGAGGGGGCCCACTGGTTGTTaGCGCTCTCCTCCCGCGGCA +
Preference number: 4 (lower is better)
Translates to: EGFGQTCIHHLGMPTHSRGPTGC*RSPPAA
Trigger: TGCCGCGGGAGGAGAGCGCCAACAACCAGTGGGCCC...CCTCGAATGCGTTGGCATGCCAAGGTGGTGGATGCAGGTTTGGCCAAAACCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp CAGCAGGGTAAAGACTTGCACATCACTGACAGGCGGCTCGGAGTCAGCCTTGGAGCCACCACAGCCACGTaGGCCAATACCCAGCACGCG +
Preference number: 4 (lower is better)
Translates to: QQGKDLHITDRRLGVSLGATTAT*ANTQHA
Trigger: CGCGTGCTGGGTATTGGCCCACGTGGCTGTGGTGGC...TCCAAGGCTGACTCCGAGCCGCCTGTCAGTGATGTGCAAGTCTTTACCCTGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp GCCGGCGTGGCTCTCCCCCAACCTCACTCTCAATACAAAAGGGACAGCACCGAAACGCATTCGAGGCCCTaGCAGGCCCCGACTCAACAG +
Preference number: 4 (lower is better)
Translates to: AGVALPQPHSQYKRDSTETHSRP*QAPTQQ
Trigger: CTGTTGAGTCGGGGCCTGCCAGGGCCTCGAATGCGT...TTCGGTGCTGTCCCTTTTGTATTGAGAGTGAGGTTGGGGGAGAGCCACGCCGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR TCA 90 bp GTTTTGGCCAAACCTGCATCCACCACCTTGGCATGCCAACGCATTCGAGGCCCTAGCGGTCCTCCGGGTTaGTCATGCCGGCATGCGACA +
Preference number: 4 (lower is better)
Translates to: VLAKPASTTLACQRIRGPSGPPG*SCRHAT
Trigger: TGTCGCATGCCGGCATGATCAACCCGGAGGACCGCT...AGGGCCTCGAATGCGTTGGCATGCCAAGGTGGTGGATGCAGGTTTGGCCAAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR TCA 90 bp GTTTTGGCCAAACCTGCATCCACCACCTTGGCATGCCAACGCATTCGAGGCCCTTGCGCGGCGGCGGCGTaGAGTTCTTGCACTGGTAGA +
Preference number: 4 (lower is better)
Translates to: VLAKPASTTLACQRIRGPCAAAA*SSCTGR
Trigger: TCTACCAGTGCAAGAACTTCACGCCGCCGCCGCGCA...AGGGCCTCGAATGCGTTGGCATGCCAAGGTGGTGGATGCAGGTTTGGCCAAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR TCA 90 bp GTTGCGAGGGGTCTGTGTGAAGGCACTTGTCACGAGCTTCAATACTGCCGCCGTCTTGGGCCACGCCGATaGCCTCAGGCCCCACTAACA +
Preference number: 4 (lower is better)
Translates to: VARGLCEGTCHELQYCRRLGPRR*PQAPLT
Trigger: TGTTAGTGGGGCCTGAGGTCATCGGCGTGGCCCAAG...ACGGCGGCAGTATTGAAGCTCGTGACAAGTGCCTTCACACAGACCCCTCGCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp TGCGCAGCAGGAAGGGCACTTCTGAAAGCACAGTGGAGAGATCGCTGGAGCGGGACTGCTCGGGGCAGATaGACTCAAAGCCGTCCACCT +
Preference number: 4 (lower is better)
Translates to: CAAGRALLKAQWRDRWSGTARGR*TQSRPP
Trigger: AGGTGGACGGCTTTGAGTGCATCTGCCCCGAGCAGT...CCCGCTCCAGCGATCTCTCCACTGTGCTTTCAGAAGTGCCCTTCCTGCTGCGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp AATACTGCCGCCGTCCCAGGATGGGAGAACTGCGCAGCAGGAAGGGCACTTCTGACTGCTCGGGGCAGATaGACTCAAAGCCGTCCACCT +
Preference number: 4 (lower is better)
Translates to: NTAAVPGWENCAAGRALLTARGR*TQSRPP
Trigger: AGGTGGACGGCTTTGAGTGCATCTGCCCCGAGCAGT...CAGAAGTGCCCTTCCTGCTGCGCAGTTCTCCCATCCTGGGACGGCGGCAGTATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp ACCCCTCACAGCAGGGTAAAGACTTGCACATCACTGACAGGCGGCTCGGAGTCACCAGGTCCTTGCAGGTaGCCCCATGCTGACACTGCC +
Preference number: 4 (lower is better)
Translates to: TPHSRVKTCTSLTGGSESPGPCR*PHADTA
Trigger: GGCAGTGTCAGCATGGGGGCACCTGCAAGGACCTGG...TGACTCCGAGCCGCCTGTCAGTGATGTGCAAGTCTTTACCCTGCTGTGAGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp AAGGTTTTGGCCAAACCTGCATCCACCACCTTGGCATGCCAACGCATTCGAGGCCGTTCCAGCTCGCAATaGCGGCCTCCGAAGCCCCGT +
Preference number: 4 (lower is better)
Translates to: KVLAKPASTTLACQRIRGRSSSQ*RPPKPR
Trigger: ACGGGGCTTCGGAGGCCGGCATTGCGAGCTGGAACG...GCCTCGAATGCGTTGGCATGCCAAGGTGGTGGATGCAGGTTTGGCCAAAACCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp CCACTGCCCCAAGCCTCTCTGCCGGCGTGGCTCTCCCCCAACCTCACTCTCAATAGCCACTGTCACAGATaGAGGAAAAGTTGCCCCCTG +
Preference number: 4 (lower is better)
Translates to: PLPQASLPAWLSPNLTLNSHCHR*RKSCPL
Trigger: CAGGGGGCAACTTTTCCTGCATCTGTGACAGTGGCT...ATTGAGAGTGAGGTTGGGGGAGAGCCACGCCGGCAGAGAGGCTTGGGGCAGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp GCCGGCGTGGCTCTCCCCCAACCTCACTCTCAATACAAAAGGGACAGCACCGAACGTCCACCTCATCGATaGATGTGCCCCCATTGCGGC +
Preference number: 4 (lower is better)
Translates to: AGVALPQPHSQYKRDSTERPPHR*MCPHCG
Trigger: GCCGCAATGGGGGCACATGCATCGATGAGGTGGACG...TTCGGTGCTGTCCCTTTTGTATTGAGAGTGAGGTTGGGGGAGAGCCACGCCGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp ACCTCCTACCCCTCACAGCAGGGTAAAGACTTGCACATCACTGACAGGCGGCTCGGCAGCGGCAGCTGTTaGAGTCTTCCACCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: TSYPSQQGKDLHITDRRLGSGSC*SLPPRS
Trigger: GCTCCTGGGTGGAAGACTGCAACAGCTGCCGCTGCC...GAGCCGCCTGTCAGTGATGTGCAAGTCTTTACCCTGCTGTGAGGGGTAGGAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp GTTTTGGCCAAACCTGCATCCACCACCTTGGCATGCCAACGCATTCGAGGCCCTGGCAGCGGCAGCTGTTaGAGTCTTCCACCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: VLAKPASTTLACQRIRGPGSGSC*SLPPRS
Trigger: GCTCCTGGGTGGAAGACTGCAACAGCTGCCGCTGCC...AGGGCCTCGAATGCGTTGGCATGCCAAGGTGGTGGATGCAGGTTTGGCCAAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp ACCTCCTACCCCTCACAGCAGGGTAAAGACTTGCACATCACTGACAGGCGGCTCCGCACCACACCTTGCTaGAGTCACGGCGGCCATCCA +
Preference number: 4 (lower is better)
Translates to: TSYPSQQGKDLHITDRRLRTTPC*SHGGHP
Trigger: TGGATGGCCGCCGTGACTGCAGCAAGGTGTGGTGCG...GAGCCGCCTGTCAGTGATGTGCAAGTCTTTACCCTGCTGTGAGGGGTAGGAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp TGCGCAGCAGGAAGGGCACTTCTGAAAGCACAGTGGAGAGATCGCTGGAGCGGGGCTCTTTCCTGCGCTTaGGTGTCCACCACACGCACA +
Preference number: 4 (lower is better)
Translates to: CAAGRALLKAQWRDRWSGALSCA*VSTTRT
Trigger: TGTGCGTGTGGTGGACACGCAAGCGCAGGAAAGAGC...CCCGCTCCAGCGATCTCTCCACTGTGCTTTCAGAAGTGCCCTTCCTGCTGCGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp CCACTGCCCCAAGCCTCTCTGCCGGCGTGGCTCTCCCCCAACCTCACTCTCAATGGTTTTGGCCAAACCTaGATCCACCACCTTGGCATG +
Preference number: 4 (lower is better)
Translates to: PLPQASLPAWLSPNLTLNGFGQT*IHHLGM
Trigger: CATGCCAAGGTGGTGGATGCAGGTTTGGCCAAAACC...ATTGAGAGTGAGGTTGGGGGAGAGCCACGCCGGCAGAGAGGCTTGGGGCAGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp CACGGGTCCCACCAACAGCCATGGGCCACACCAACACAGCCATGGGTCTCACCGAGCAGGGTAAAGACTTaGACATCACTGACAGGCGGC +
Preference number: 4 (lower is better)
Translates to: HGSHQQPWATPTQPWVSPSRVKT*TSLTGG
Trigger: GCCGCCTGTCAGTGATGTGCAAGTCTTTACCCTGCT...CGGTGAGACCCATGGCTGTGTTGGTGTGGCCCATGGCTGTTGGTGGGACCCGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp AATACTGCCGCCGTCCCAGGATGGGAGAACTGCGCAGCAGGAAGGGCACTTCTGGGCGTCACCTTGGCCTaGTACTCCTTAAGGCACACG +
Preference number: 4 (lower is better)
Translates to: NTAAVPGWENCAAGRALLGVTLA*YSLRHT
Trigger: CGTGTGCCTTAAGGAGTACCAGGCCAAGGTGACGCC...CAGAAGTGCCCTTCCTGCTGCGCAGTTCTCCCATCCTGGGACGGCGGCAGTATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp AAGGTTTTGGCCAAACCTGCATCCACCACCTTGGCATGCCAACGCATTCGAGGCTCCAGGTGCGCCACGTaGCCGCTGAAGTGCAGGCTC +
Preference number: 4 (lower is better)
Translates to: KVLAKPASTTLACQRIRGSRCAT*PLKCRL
Trigger: GAGCCTGCACTTCAGCGGCCACGTGGCGCACCTGGA...GCCTCGAATGCGTTGGCATGCCAAGGTGGTGGATGCAGGTTTGGCCAAAACCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp GAAGGTTTTGGCCAAACCTGCATCCACCACCTTGGCATGCCAACGCATTCGAGGTGCACGTGCCTCCGTTaGTGCAGGGGTGGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: EGFGQTCIHHLGMPTHSRCTCLR*CRGGGC
Trigger: GCAGCCACCACCCCTGCACCAACGGAGGCACGTGCA...CCTCGAATGCGTTGGCATGCCAAGGTGGTGGATGCAGGTTTGGCCAAAACCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp GCCGGCGTGGCTCTCCCCCAACCTCACTCTCAATACAAAAGGGACAGCACCGAACAGGTGCAGCGGTACTaGTCAGGCTCGGCGTTGATG +
Preference number: 4 (lower is better)
Translates to: AGVALPQPHSQYKRDSTEQVQRY*SGSALM
Trigger: CATCAACGCCGAGCCTGACCAGTACCGCTGCACCTG...TTCGGTGCTGTCCCTTTTGTATTGAGAGTGAGGTTGGGGGAGAGCCACGCCGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp AAGGTTTTGGCCAAACCTGCATCCACCACCTTGGCATGCCAACGCATTCGAGGCGGCAAGAGCCCCCGTTaGCACACGGGTTGGAGGTGC +
Preference number: 4 (lower is better)
Translates to: KVLAKPASTTLACQRIRGGKSPR*HTGWRC
Trigger: GCACCTCCAACCCGTGTGCCAACGGGGGCTCTTGCC...GCCTCGAATGCGTTGGCATGCCAAGGTGGTGGATGCAGGTTTGGCCAAAACCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp AAGGTTTTGGCCAAACCTGCATCCACCACCTTGGCATGCCAACGCATTCGAGGCTGTCAAGGGCACAGGTaGGCCCGCTCCAGCCCGATG +
Preference number: 4 (lower is better)
Translates to: KVLAKPASTTLACQRIRGCQGHR*ARSSPM
Trigger: CATCGGGCTGGAGCGGGCCCACCTGTGCCCTTGACA...GCCTCGAATGCGTTGGCATGCCAAGGTGGTGGATGCAGGTTTGGCCAAAACCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp GAAGGTTTTGGCCAAACCTGCATCCACCACCTTGGCATGCCAACGCATTCGAGGGCCTCCGAAGCCCCGTaGGCACACACACTGGTACCC +
Preference number: 4 (lower is better)
Translates to: EGFGQTCIHHLGMPTHSRASEAP*AHTLVP
Trigger: GGGTACCAGTGTGTGTGCCCACGGGGCTTCGGAGGC...CCTCGAATGCGTTGGCATGCCAAGGTGGTGGATGCAGGTTTGGCCAAAACCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp CAACCTCACTCTCAATACAAAAGGGACAGCACCGAAAGAACAAGGGAGGCCGGACAGAGGCCGCCGCTGTaGCAGGGGCTGCTGGCACAC +
Preference number: 4 (lower is better)
Translates to: QPHSQYKRDSTERTREAGQRPPL*QGLLAH
Trigger: GTGTGCCAGCAGCCCCTGCCACAGCGGCGGCCTCTG...TCCGGCCTCCCTTGTTCTTTCGGTGCTGTCCCTTTTGTATTGAGAGTGAGGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp ACGCCGATGACCTCAGGCCCCACTAACAACCACAGGTGCGTCAACAGCCACGGGCATTCACACAGGGGTTaGGCAGGCAGCTGCTGTTCT +
Preference number: 4 (lower is better)
Translates to: TPMTSGPTNNHRCVNSHGHSHRG*AGSCCS
Trigger: AGAACAGCAGCTGCCTGCCCAACCCCTGTGTGAATG...CCCGTGGCTGTTGACGCACCTGTGGTTGTTAGTGGGGCCTGAGGTCATCGGCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp CAACCTCACTCTCAATACAAAAGGGACAGCACCGAAAGAACAAGGGAGGCCGGAGCCGGCTCGGCCGGGTaGGCAGCTACAGCGATACCC +
Preference number: 4 (lower is better)
Translates to: QPHSQYKRDSTERTREAGAGSAG*AATAIP
Trigger: GGGTATCGCTGTAGCTGCCCACCCGGCCGAGCCGGC...TCCGGCCTCCCTTGTTCTTTCGGTGCTGTCCCTTTTGTATTGAGAGTGAGGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp TGCGCAGCAGGAAGGGCACTTCTGAAAGCACAGTGGAGAGATCGCTGGAGCGGGGTGCCCTGGGGCACGTaGTCACGGTTGAAATGCAAG +
Preference number: 4 (lower is better)
Translates to: CAAGRALLKAQWRDRWSGVPWGT*SRLKCK
Trigger: CTTGCATTTCAACCGTGACCACGTGCCCCAGGGCAC...CCCGCTCCAGCGATCTCTCCACTGTGCTTTCAGAAGTGCCCTTCCTGCTGCGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp AAGGTTTTGGCCAAACCTGCATCCACCACCTTGGCATGCCAACGCATTCGAGGCGCAGGCAGGGTGGACTaGCCAGCAAGCGCGAGGTTG +
Preference number: 4 (lower is better)
Translates to: KVLAKPASTTLACQRIRGAGRVD*PASARL
Trigger: CAACCTCGCGCTTGCTGGCCAGTCCACCCTGCCTGC...GCCTCGAATGCGTTGGCATGCCAAGGTGGTGGATGCAGGTTTGGCCAAAACCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp AACTGCGCAGCAGGAAGGGCACTTCTGAAAGCACAGTGGAGAGATCGCTGGAGCCAGTGGAGAGATCGCTaGAGCGGGCGTTCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: NCAAGRALLKAQWRDRWSQWRDR*SGRSGQ
Trigger: CTGCCCAGAACGCCCGCTCCAGCGATCTCTCCACTG...GCTCCAGCGATCTCTCCACTGTGCTTTCAGAAGTGCCCTTCCTGCTGCGCAGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp AGCAGGGTAAAGACTTGCACATCACTGACAGGCGGCTCGGAGTCAGCCTTGGAGCAGTGGAGAGATCGCTaGAGCGGGCGTTCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: SRVKTCTSLTGGSESALEQWRDR*SGRSGQ
Trigger: CTGCCCAGAACGCCCGCTCCAGCGATCTCTCCACTG...CTCCAAGGCTGACTCCGAGCCGCCTGTCAGTGATGTGCAAGTCTTTACCCTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR TCA 90 bp GATTTGGTGACGACGCAGACACCCTTTGCTCTCTCCTTTCATACAGCGAGTGCCCGAACTGGAAGGGGATaGCGACGAGGCCCGGGTCCT +
Preference number: 4 (lower is better)
Translates to: DLVTTQTPFALSFHTASARTGRG*RRGPGP
Trigger: AGGACCCGGGCCTCGTCGTCATCCCCTTCCAGTTCG...GGCACTCGCTGTATGAAAGGAGAGAGCAAAGGGTGTCTGCGTCGTCACCAAATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR TCA 90 bp ACCCCTCACAGCAGGGTAAAGACTTGCACATCACTGACAGGCGGCTCGGAGTCACGCAGCGGAACCAGTTaGCGCCGTCAACACAGATGC +
Preference number: 4 (lower is better)
Translates to: TPHSRVKTCTSLTGGSESRSGTS*RRQHRC
Trigger: GCATCTGTGTTGACGGCGTCAACTGGTTCCGCTGCG...TGACTCCGAGCCGCCTGTCAGTGATGTGCAAGTCTTTACCCTGCTGTGAGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR TCA 90 bp GATTTGGTGACGACGCAGACACCCTTTGCTCTCTCCTTTCATACAGCGAGTGCCGACAGCCAGGAGCAGTaGGCTGTTCCCCCGCTGGGT +
Preference number: 4 (lower is better)
Translates to: DLVTTQTPFALSFHTASADSQEQ*AVPPLG
Trigger: ACCCAGCGGGGGAACAGCTCACTGCTCCTGGCTGTC...GGCACTCGCTGTATGAAAGGAGAGAGCAAAGGGTGTCTGCGTCGTCACCAAATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp CAACCTCACTCTCAATACAAAAGGGACAGCACCGAAAGAACAAGGGAGGCCGGACAGCGCACGCGGATCTaGAGCTCCAGGTGCGCCACG +
Preference number: 4 (lower is better)
Translates to: QPHSQYKRDSTERTREAGQRTRI*SSRCAT
Trigger: CGTGGCGCACCTGGAGCTGCAGATCCGCGTGCGCTG...TCCGGCCTCCCTTGTTCTTTCGGTGCTGTCCCTTTTGTATTGAGAGTGAGGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp GCACTTGTCACGAGCTTCAATACTGCCGCCGTCCCAGGATGGGAGAACTGCGCACTTCCTTGCACTCCTTaGCCATCCAGCCGTCCATGC +
Preference number: 4 (lower is better)
Translates to: ALVTSFNTAAVPGWENCALPCTP*PSSRPC
Trigger: GCATGGACGGCTGGATGGGCAAGGAGTGCAAGGAAG...TGCGCAGTTCTCCCATCCTGGGACGGCGGCAGTATTGAAGCTCGTGACAAGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp CACATCACTGACAGGCGGCTCGGAGTCAGCCTTGGAGTCGGCCTTCCATGCCCATACACACAGCTTCCTTaGACTCCTTGCCCATCCAGC +
Preference number: 4 (lower is better)
Translates to: HITDRRLGVSLGVGLPCPYTQLP*TPCPSS
Trigger: GCTGGATGGGCAAGGAGTGCAAGGAAGCTGTGTGTA...TGGGCATGGAAGGCCGACTCCAAGGCTGACTCCGAGCCGCCTGTCAGTGATGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp ACCTCCTACCCCTCACAGCAGGGTAAAGACTTGCACATCACTGACAGGCGGCTCCACACGGGTTGGAGGTaGAGGCGTGCTCAGCCTTCT +
Preference number: 4 (lower is better)
Translates to: TSYPSQQGKDLHITDRRLHTGWR*RRAQPS
Trigger: AGAAGGCTGAGCACGCCTGCACCTCCAACCCGTGTG...GAGCCGCCTGTCAGTGATGTGCAAGTCTTTACCCTGCTGTGAGGGGTAGGAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp CAGCAGGGTAAAGACTTGCACATCACTGACAGGCGGCTCGGAGTCAGCCTTGGACGTTCACCAGGTCCTTaGAGGTGCCCCCATGCTGAC +
Preference number: 4 (lower is better)
Translates to: QQGKDLHITDRRLGVSLGRSPGP*RCPHAD
Trigger: GTCAGCATGGGGGCACCTGCAAGGACCTGGTGAACG...TCCAAGGCTGACTCCGAGCCGCCTGTCAGTGATGTGCAAGTCTTTACCCTGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp GCCGGCGTGGCTCTCCCCCAACCTCACTCTCAATACAAAAGGGACAGCACCGAAAGGTGCCACCGTTGCTaGAGGTGTAGGCATCGCACT +
Preference number: 4 (lower is better)
Translates to: AGVALPQPHSQYKRDSTERCHRC*RCRHRT
Trigger: AGTGCGATGCCTACACCTGCAGCAACGGTGGCACCT...TTCGGTGCTGTCCCTTTTGTATTGAGAGTGAGGTTGGGGGAGAGCCACGCCGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp ACCCCTCACAGCAGGGTAAAGACTTGCACATCACTGACAGGCGGCTCGGAGTCATTAGTCAGGGTCGGGTaGCAGGCACCTAGACACCCC +
Preference number: 4 (lower is better)
Translates to: TPHSRVKTCTSLTGGSESLVRVG*QAPRHP
Trigger: GGGGTGTCTAGGTGCCTGGCACCCGACCCTGACTAA...TGACTCCGAGCCGCCTGTCAGTGATGTGCAAGTCTTTACCCTGCTGTGAGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp CAGCAGGGTAAAGACTTGCACATCACTGACAGGCGGCTCGGAGTCAGCCTTGGAGCCAGGTGGAAGGGCTaGTTCTCTCCTGCCTCCATC +
Preference number: 4 (lower is better)
Translates to: QQGKDLHITDRRLGVSLGARWKG*FSPASI
Trigger: GATGGAGGCAGGAGAGAAGCAGCCCTTCCACCTGGC...TCCAAGGCTGACTCCGAGCCGCCTGTCAGTGATGTGCAAGTCTTTACCCTGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp ACCTCCTACCCCTCACAGCAGGGTAAAGACTTGCACATCACTGACAGGCGGCTCGCCCTGAGGCCACCATaGCACGTTCCAGTTGGCTCA +
Preference number: 4 (lower is better)
Translates to: TSYPSQQGKDLHITDRRLALRPP*HVPVGS
Trigger: TGAGCCAACTGGAACGTGGCATGGTGGCCTCAGGGC...GAGCCGCCTGTCAGTGATGTGCAAGTCTTTACCCTGCTGTGAGGGGTAGGAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp GGTGGGCAGCGCCTGGTGCCACGGCACGCGTGGACAGTTGCGAGGGGTCTGTGTTTTATTCATTTGTTCTaGCTGTGCAAGGCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: GGQRLVPRHAWTVARGLCFIHLF*LCKAAS
Trigger: TGAGGCTGCCTTGCACAGGCAGAACAAATGAATAAA...ACACAGACCCCTCGCAACTGTCCACGCGTGCCGTGGCACCAGGCGCTGCCCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp GTTGCGAGGGGTCTGTGTGAAGGCACTTGTCACGAGCTTCAATACTGCCGCCGTTCAAAGCCGTCCACCTaGTCCACACAGGTGCCACCG +
Preference number: 4 (lower is better)
Translates to: VARGLCEGTCHELQYCRRSKPST*STQVPP
Trigger: CGGTGGCACCTGTGTGGACCAGGTGGACGGCTTTGA...ACGGCGGCAGTATTGAAGCTCGTGACAAGTGCCTTCACACAGACCCCTCGCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp GAAGGTTTTGGCCAAACCTGCATCCACCACCTTGGCATGCCAACGCATTCGAGGGGAAAAGTTGCCCCCTaGCTGGCTGACGCAGCGTCC +
Preference number: 4 (lower is better)
Translates to: EGFGQTCIHHLGMPTHSRGKVAP*LADAAS
Trigger: GGACGCTGCGTCAGCCAGCCAGGGGGCAACTTTTCC...CCTCGAATGCGTTGGCATGCCAAGGTGGTGGATGCAGGTTTGGCCAAAACCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp AACTGCGCAGCAGGAAGGGCACTTCTGAAAGCACAGTGGAGAGATCGCTGGAGCGGCAGTCGTTGGGATTaGTGTCGCAGAGCTCGCCCT +
Preference number: 4 (lower is better)
Translates to: NCAAGRALLKAQWRDRWSGSRWD*CRRARP
Trigger: AGGGCGAGCTCTGCGACACCAATCCCAACGACTGCC...GCTCCAGCGATCTCTCCACTGTGCTTTCAGAAGTGCCCTTCCTGCTGCGCAGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp GATTTGGTGACGACGCAGACACCCTTTGCTCTCTCCTTTCATACAGCGAGTGCCAAATGGCGCCCACCGTaGTGCCCTGGGGCACGTGGT +
Preference number: 4 (lower is better)
Translates to: DLVTTQTPFALSFHTASAKWRPP*CPGARG
Trigger: ACCACGTGCCCCAGGGCACCACGGTGGGCGCCATTT...GGCACTCGCTGTATGAAAGGAGAGAGCAAAGGGTGTCTGCGTCGTCACCAAATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp ACCTCACTCTCAATACAAAAGGGACAGCACCGAAAGAACAAGGGAGGCCGGAATGGGTCCCGGCCCAGCTaGCAGCCGCCCCTACTCCTT +
Preference number: 4 (lower is better)
Translates to: TSLSIQKGQHRKNKGGRNGSRPS*QPPLLL
Trigger: AAGGAGTAGGGGCGGCTGCCAGCTGGGCCGGGACCC...ATTCCGGCCTCCCTTGTTCTTTCGGTGCTGTCCCTTTTGTATTGAGAGTGAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp TTGCACATCACTGACAGGCGGCTCGGAGTCAGCCTTGGAGTCGGCCTTCCATGCACACCAACACAGCCATaGGTCTCACCGGCACTTTGG +
Preference number: 4 (lower is better)
Translates to: LHITDRRLGVSLGVGLPCTPTQP*VSPALW
Trigger: CCAAAGTGCCGGTGAGACCCATGGCTGTGTTGGTGT...GCATGGAAGGCCGACTCCAAGGCTGACTCCGAGCCGCCTGTCAGTGATGTGCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp AATACTGCCGCCGTCCCAGGATGGGAGAACTGCGCAGCAGGAAGGGCACTTCTGCTTCTGAAAGCACAGTaGAGAGATCGCTGGAGCGGG +
Preference number: 4 (lower is better)
Translates to: NTAAVPGWENCAAGRALLLLKAQ*RDRWSG
Trigger: CCCGCTCCAGCGATCTCTCCACTGTGCTTTCAGAAG...CAGAAGTGCCCTTCCTGCTGCGCAGTTCTCCCATCCTGGGACGGCGGCAGTATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp CGCCCTCTACAGCCACCACAGCCACGTGGGCCAATACCCAGCACGCGCCCCACTCAAGGGAGGCCGGAATaGTGGCATTATTCAATCAAA +
Preference number: 4 (lower is better)
Translates to: RPLQPPQPRGPIPSTRPTQGRPE*WHYSIK
Trigger: TTTGATTGAATAATGCCACCATTCCGGCCTCCCTTG...AGTGGGGCGCGTGCTGGGTATTGGCCCACGTGGCTGTGGTGGCTGTAGAGGGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp GAAGGTTTTGGCCAAACCTGCATCCACCACCTTGGCATGCCAACGCATTCGAGGACGCATTCGAGGCCCTaGCAGGCCCCGACTCAACAG +
Preference number: 4 (lower is better)
Translates to: EGFGQTCIHHLGMPTHSRTHSRP*QAPTQQ
Trigger: CTGTTGAGTCGGGGCCTGCCAGGGCCTCGAATGCGT...CCTCGAATGCGTTGGCATGCCAAGGTGGTGGATGCAGGTTTGGCCAAAACCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp AAGGTTTTGGCCAAACCTGCATCCACCACCTTGGCATGCCAACGCATTCGAGGCGCTCGGAGTCAGCCTTaGAGTCGGCCTTCCATGCCC +
Preference number: 4 (lower is better)
Translates to: KVLAKPASTTLACQRIRGARSQP*SRPSMP
Trigger: GGGCATGGAAGGCCGACTCCAAGGCTGACTCCGAGC...GCCTCGAATGCGTTGGCATGCCAAGGTGGTGGATGCAGGTTTGGCCAAAACCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR TCA 90 bp ACCTCACTCTCAATACAAAAGGGACAGCACCGAAAGAACAAGGGAGGCCGGAATGGTCCCTGGCAGGGCTaGAGGACACGGCCACCTCCA +
Preference number: 4 (lower is better)
Translates to: TSLSIQKGQHRKNKGGRNGPWQG*RTRPPP
Trigger: TGGAGGTGGCCGTGTCCTTCAGCCCTGCCAGGGACC...ATTCCGGCCTCCCTTGTTCTTTCGGTGCTGTCCCTTTTGTATTGAGAGTGAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR TCA 90 bp CACGGGTCCCACCAACAGCCATGGGCCACACCAACACAGCCATGGGTCTCACCGGGCCAGGATCTTTGGTaGATTTGTGTGAGAGGAACT +
Preference number: 4 (lower is better)
Translates to: HGSHQQPWATPTQPWVSPGQDLW*ICVRGT
Trigger: AGTTCCTCTCACACAAATTCACCAAAGATCCTGGCC...CGGTGAGACCCATGGCTGTGTTGGTGTGGCCCATGGCTGTTGGTGGGACCCGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR TCA 90 bp TGCGCAGCAGGAAGGGCACTTCTGAAAGCACAGTGGAGAGATCGCTGGAGCGGGCAGGAAGGGCACTTCTaGAAGCACAGTGGAGAGATC +
Preference number: 4 (lower is better)
Translates to: CAAGRALLKAQWRDRWSGQEGHF*KHSGEI
Trigger: GATCTCTCCACTGTGCTTTCAGAAGTGCCCTTCCTG...CCCGCTCCAGCGATCTCTCCACTGTGCTTTCAGAAGTGCCCTTCCTGCTGCGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR TCA 90 bp GTTTTGGCCAAACCTGCATCCACCACCTTGGCATGCCAACGCATTCGAGGCCCTTGCGAGGGGTCTGTGTaGAGGCACTTGTCACGAGCT +
Preference number: 4 (lower is better)
Translates to: VLAKPASTTLACQRIRGPCEGSV*RHLSRA
Trigger: AGCTCGTGACAAGTGCCTTCACACAGACCCCTCGCA...AGGGCCTCGAATGCGTTGGCATGCCAAGGTGGTGGATGCAGGTTTGGCCAAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR TCA 90 bp AGCAGGGTAAAGACTTGCACATCACTGACAGGCGGCTCGGAGTCAGCCTTGGAGAGACTTGCACATCACTaGCAGGCGGCTCGGAGTCAG +
Preference number: 4 (lower is better)
Translates to: SRVKTCTSLTGGSESALERLAHH*QAARSQ
Trigger: CTGACTCCGAGCCGCCTGTCAGTGATGTGCAAGTCT...CTCCAAGGCTGACTCCGAGCCGCCTGTCAGTGATGTGCAAGTCTTTACCCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR TCA 90 bp ACCCCTCACAGCAGGGTAAAGACTTGCACATCACTGACAGGCGGCTCGGAGTCAAGACTTGCACATCACTaGCAGGCGGCTCGGAGTCAG +
Preference number: 4 (lower is better)
Translates to: TPHSRVKTCTSLTGGSESRLAHH*QAARSQ
Trigger: CTGACTCCGAGCCGCCTGTCAGTGATGTGCAAGTCT...TGACTCCGAGCCGCCTGTCAGTGATGTGCAAGTCTTTACCCTGCTGTGAGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp GATTTGGTGACGACGCAGACACCCTTTGCTCTCTCCTTTCATACAGCGAGTGCCACGTGGCCGCTGAAGTaGAGGCTCTTCCAGCGGTCC +
Preference number: 4 (lower is better)
Translates to: DLVTTQTPFALSFHTASATWPLK*RLFQRS
Trigger: GGACCGCTGGAAGAGCCTGCACTTCAGCGGCCACGT...GGCACTCGCTGTATGAAAGGAGAGAGCAAAGGGTGTCTGCGTCGTCACCAAATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp GTTGCGAGGGGTCTGTGTGAAGGCACTTGTCACGAGCTTCAATACTGCCGCCGTCCATCCAGCCGTCCATaGAGGCCTTGTTGCCGTACT +
Preference number: 4 (lower is better)
Translates to: VARGLCEGTCHELQYCRRPSSRP*RPCCRT
Trigger: AGTACGGCAACAAGGCCTGCATGGACGGCTGGATGG...ACGGCGGCAGTATTGAAGCTCGTGACAAGTGCCTTCACACAGACCCCTCGCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp GCCGGCGTGGCTCTCCCCCAACCTCACTCTCAATACAAAAGGGACAGCACCGAATGCAGGGGTGGTGGCTaGCACAGTAGTTCAGGTCTT +
Preference number: 4 (lower is better)
Translates to: AGVALPQPHSQYKRDSTECRGGG*HSSSGL
Trigger: AAGACCTGAACTACTGTGGCAGCCACCACCCCTGCA...TTCGGTGCTGTCCCTTTTGTATTGAGAGTGAGGTTGGGGGAGAGCCACGCCGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp TTGCACATCACTGACAGGCGGCTCGGAGTCAGCCTTGGAGTCGGCCTTCCATGCCGTTGGTATTGTGAGTaGAAGTACGACCCTCCCAGC +
Preference number: 4 (lower is better)
Translates to: LHITDRRLGVSLGVGLPCRWYCE*KYDPPS
Trigger: GCTGGGAGGGTCGTACTTGCACTCACAATACCAACG...GCATGGAAGGCCGACTCCAAGGCTGACTCCGAGCCGCCTGTCAGTGATGTGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp GTTGCGAGGGGTCTGTGTGAAGGCACTTGTCACGAGCTTCAATACTGCCGCCGTTCTCCCGCTCTTTCCTaGGCTTGCGTGTCCACCACA +
Preference number: 4 (lower is better)
Translates to: VARGLCEGTCHELQYCRRSPALS*ACVSTT
Trigger: TGTGGTGGACACGCAAGCGCAGGAAAGAGCGGGAGA...ACGGCGGCAGTATTGAAGCTCGTGACAAGTGCCTTCACACAGACCCCTCGCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp ACCTCACTCTCAATACAAAAGGGACAGCACCGAAAGAACAAGGGAGGCCGGAATTGCCCCAAGCCTCTCTaGCGGCGTGGCTCTCCCCCA +
Preference number: 4 (lower is better)
Translates to: TSLSIQKGQHRKNKGGRNCPKPL*RRGSPP
Trigger: TGGGGGAGAGCCACGCCGGCAGAGAGGCTTGGGGCA...ATTCCGGCCTCCCTTGTTCTTTCGGTGCTGTCCCTTTTGTATTGAGAGTGAGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp ACCCCTCACAGCAGGGTAAAGACTTGCACATCACTGACAGGCGGCTCGGAGTCATCCACCACCTTGGCATaGCAACGCATTCGAGGCCCT +
Preference number: 4 (lower is better)
Translates to: TPHSRVKTCTSLTGGSESSTTLA*QRIRGP
Trigger: AGGGCCTCGAATGCGTTGGCATGCCAAGGTGGTGGA...TGACTCCGAGCCGCCTGTCAGTGATGTGCAAGTCTTTACCCTGCTGTGAGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp CAACCTCACTCTCAATACAAAAGGGACAGCACCGAAAGAACAAGGGAGGCCGGACCGGACGGCACCTCATaGCAAGAGCCCCCGTTGGCA +
Preference number: 4 (lower is better)
Translates to: QPHSQYKRDSTERTREAGPDGTS*QEPPLA
Trigger: TGCCAACGGGGGCTCTTGCCATGAGGTGCCGTCCGG...TCCGGCCTCCCTTGTTCTTTCGGTGCTGTCCCTTTTGTATTGAGAGTGAGGTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp GTTTTGGCCAAACCTGCATCCACCACCTTGGCATGCCAACGCATTCGAGGCCCTTCCCTTCACACTCATTaGCGTCCAGCTGGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: VLAKPASTTLACQRIRGPSLHTH*RPAGRW
Trigger: CCACCTGCCAGCTGGACGCCAATGAGTGTGAAGGGA...AGGGCCTCGAATGCGTTGGCATGCCAAGGTGGTGGATGCAGGTTTGGCCAAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331782.8
CDS-3UTR CCA 90 bp ACCTCCTACCCCTCACAGCAGGGTAAAGACTTGCACATCACTGACAGGCGGCTCGTTCCGGCAGGGGCTTaGCTCACAAAGGTCGACATC +
Preference number: 4 (lower is better)
Translates to: TSYPSQQGKDLHITDRRLVPAGA*LTKVDI
Trigger: GATGTCGACCTTTGTGAGCCAAGCCCCTGCCGGAAC...GAGCCGCCTGTCAGTGATGTGCAAGTCTTTACCCTGCTGTGAGGGGTAGGAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp AGCAGGGTAAAGACTTGCACATCACTGACAGGCGGCTCGGAGTCAGCCTTGGAGTGGAACTCGCGTGAGTaGCAGGTCTTGCCCTTCCAG +
Preference number: 4 (lower is better)
Translates to: SRVKTCTSLTGGSESALEWNSRE*QVLPFQ
Trigger: CTGGAAGGGCAAGACCTGCCACTCACGCGAGTTCCA...CTCCAAGGCTGACTCCGAGCCGCCTGTCAGTGATGTGCAAGTCTTTACCCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp CAACCTCACTCTCAATACAAAAGGGACAGCACCGAAAGAACAAGGGAGGCCGGACACAGCCCTTGTGGCTaGCAGGGAGCGGATCCCGGA +
Preference number: 4 (lower is better)
Translates to: QPHSQYKRDSTERTREAGHSPCG*QGADPG
Trigger: TCCGGGATCCGCTCCCTGCCAGCCACAAGGGCTGTG...TCCGGCCTCCCTTGTTCTTTCGGTGCTGTCCCTTTTGTATTGAGAGTGAGGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp GCACTTGTCACGAGCTTCAATACTGCCGCCGTCCCAGGATGGGAGAACTGCGCAACACCAACACAGCCATaGGTCTCACCGGCACTTTGG +
Preference number: 4 (lower is better)
Translates to: ALVTSFNTAAVPGWENCATPTQP*VSPALW
Trigger: CCAAAGTGCCGGTGAGACCCATGGCTGTGTTGGTGT...TGCGCAGTTCTCCCATCCTGGGACGGCGGCAGTATTGAAGCTCGTGACAAGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp GGTGGGCAGCGCCTGGTGCCACGGCACGCGTGGACAGTTGCGAGGGGTCTGTGTTCTTTTGTACAGATCTaGTTCTTGGCTTTGCTCCTT +
Preference number: 4 (lower is better)
Translates to: GGQRLVPRHAWTVARGLCSFVQI*FLALLL
Trigger: AAGGAGCAAAGCCAAGAACCAGATCTGTACAAAAGA...ACACAGACCCCTCGCAACTGTCCACGCGTGCCGTGGCACCAGGCGCTGCCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR TCA 90 bp ACCTCACTCTCAATACAAAAGGGACAGCACCGAAAGAACAAGGGAGGCCGGAATGGTCAGGCTCGGCGTTaGTGCACGTGCCTCCGTTGG +
Preference number: 4 (lower is better)
Translates to: TSLSIQKGQHRKNKGGRNGQARR*CTCLRW
Trigger: CCAACGGAGGCACGTGCATCAACGCCGAGCCTGACC...ATTCCGGCCTCCCTTGTTCTTTCGGTGCTGTCCCTTTTGTATTGAGAGTGAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR TCA 90 bp AGCAGGGTAAAGACTTGCACATCACTGACAGGCGGCTCGGAGTCAGCCTTGGAGCACAGTAGAAGTCATTaGCCAGGTCGTAGCAGCGGC +
Preference number: 4 (lower is better)
Translates to: SRVKTCTSLTGGSESALEHSRSH*PGRSSG
Trigger: GCCGCTGCTACGACCTGGTCAATGACTTCTACTGTG...CTCCAAGGCTGACTCCGAGCCGCCTGTCAGTGATGTGCAAGTCTTTACCCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR TCA 90 bp CAACCTCACTCTCAATACAAAAGGGACAGCACCGAAAGAACAAGGGAGGCCGGAAGCCACAGGTCCCATTaGCAGCCACGAGTCCCACCG +
Preference number: 4 (lower is better)
Translates to: QPHSQYKRDSTERTREAGSHRSH*QPRVPP
Trigger: CGGTGGGACTCGTGGCTGTCAATGGGACCTGTGGCT...TCCGGCCTCCCTTGTTCTTTCGGTGCTGTCCCTTTTGTATTGAGAGTGAGGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR TCA 90 bp GTTGCGAGGGGTCTGTGTGAAGGCACTTGTCACGAGCTTCAATACTGCCGCCGTAGTTGGCTCAAGCAGTaGGGGGCAAAACCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: VARGLCEGTCHELQYCRRSWLKQ*GAKPAP
Trigger: TGGAGCTGGTTTTGCCCCTCACTGCTTGAGCCAACT...ACGGCGGCAGTATTGAAGCTCGTGACAAGTGCCTTCACACAGACCCCTCGCAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp GTTGCGAGGGGTCTGTGTGAAGGCACTTGTCACGAGCTTCAATACTGCCGCCGTTTGATCATGCCGGCATaGGACACTCGCTCGATCAGC +
Preference number: 4 (lower is better)
Translates to: VARGLCEGTCHELQYCRRLIMPA*DTRSIS
Trigger: GCTGATCGAGCGAGTGTCGCATGCCGGCATGATCAA...ACGGCGGCAGTATTGAAGCTCGTGACAAGTGCCTTCACACAGACCCCTCGCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp ACCCCTCACAGCAGGGTAAAGACTTGCACATCACTGACAGGCGGCTCGGAGTCATGCAGGGGTGGTGGCTaGCACAGTAGTTCAGGTCTT +
Preference number: 4 (lower is better)
Translates to: TPHSRVKTCTSLTGGSESCRGGG*HSSSGL
Trigger: AAGACCTGAACTACTGTGGCAGCCACCACCCCTGCA...TGACTCCGAGCCGCCTGTCAGTGATGTGCAAGTCTTTACCCTGCTGTGAGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp GTTTTGGCCAAACCTGCATCCACCACCTTGGCATGCCAACGCATTCGAGGCCCTCCTTCCAGCCCGGGATaGAATCACAGTAATAGCCGC +
Preference number: 4 (lower is better)
Translates to: VLAKPASTTLACQRIRGPPSSPG*NHSNSR
Trigger: GCGGCTATTACTGTGATTGCATCCCGGGCTGGAAGG...AGGGCCTCGAATGCGTTGGCATGCCAAGGTGGTGGATGCAGGTTTGGCCAAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331782.8
CDS-3UTR GCA 90 bp AAGGTTTTGGCCAAACCTGCATCCACCACCTTGGCATGCCAACGCATTCGAGGCAGGTGCCACCGTTGCTaGAGGTGTAGGCATCGCACT +
Preference number: 4 (lower is better)
Translates to: KVLAKPASTTLACQRIRGRCHRC*RCRHRT
Trigger: AGTGCGATGCCTACACCTGCAGCAACGGTGGCACCT...GCCTCGAATGCGTTGGCATGCCAAGGTGGTGGATGCAGGTTTGGCCAAAACCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp TTGCACATCACTGACAGGCGGCTCGGAGTCAGCCTTGGAGTCGGCCTTCCATGCAGCAAGGCAGAGGGTTaGAGTCGTTGGTATTGTGAG +
Preference number: 4 (lower is better)
Translates to: LHITDRRLGVSLGVGLPCSKAEG*SRWYCE
Trigger: CTCACAATACCAACGACTGCAACCCTCTGCCTTGCT...GCATGGAAGGCCGACTCCAAGGCTGACTCCGAGCCGCCTGTCAGTGATGTGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp ACGCCGATGACCTCAGGCCCCACTAACAACCACAGGTGCGTCAACAGCCACGGGCTTTCATACAGCGAGTaGCACGCACGGAAACTTTAC +
Preference number: 4 (lower is better)
Translates to: TPMTSGPTNNHRCVNSHGLSYSE*HARKLY
Trigger: GTAAAGTTTCCGTGCGTGGCACTCGCTGTATGAAAG...CCCGTGGCTGTTGACGCACCTGTGGTTGTTAGTGGGGCCTGAGGTCATCGGCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp GCCGGCGTGGCTCTCCCCCAACCTCACTCTCAATACAAAAGGGACAGCACCGAAGGTTTTGGCCAAACCTaGATCCACCACCTTGGCATG +
Preference number: 4 (lower is better)
Translates to: AGVALPQPHSQYKRDSTEGFGQT*IHHLGM
Trigger: CATGCCAAGGTGGTGGATGCAGGTTTGGCCAAAACC...TTCGGTGCTGTCCCTTTTGTATTGAGAGTGAGGTTGGGGGAGAGCCACGCCGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp GAAGGTTTTGGCCAAACCTGCATCCACCACCTTGGCATGCCAACGCATTCGAGGGGCGTCACCTTGGCCTaGTACTCCTTAAGGCACACG +
Preference number: 4 (lower is better)
Translates to: EGFGQTCIHHLGMPTHSRGVTLA*YSLRHT
Trigger: CGTGTGCCTTAAGGAGTACCAGGCCAAGGTGACGCC...CCTCGAATGCGTTGGCATGCCAAGGTGGTGGATGCAGGTTTGGCCAAAACCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp ACCTCACTCTCAATACAAAAGGGACAGCACCGAAAGAACAAGGGAGGCCGGAATGCCTCCGAAGCCCCGTaGGCACACACACTGGTACCC +
Preference number: 4 (lower is better)
Translates to: TSLSIQKGQHRKNKGGRNASEAP*AHTLVP
Trigger: GGGTACCAGTGTGTGTGCCCACGGGGCTTCGGAGGC...ATTCCGGCCTCCCTTGTTCTTTCGGTGCTGTCCCTTTTGTATTGAGAGTGAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp ACCTCACTCTCAATACAAAAGGGACAGCACCGAAAGAACAAGGGAGGCCGGAATCACAGCCCTTGTGGCTaGCAGGGAGCGGATCCCGGA +
Preference number: 4 (lower is better)
Translates to: TSLSIQKGQHRKNKGGRNHSPCG*QGADPG
Trigger: TCCGGGATCCGCTCCCTGCCAGCCACAAGGGCTGTG...ATTCCGGCCTCCCTTGTTCTTTCGGTGCTGTCCCTTTTGTATTGAGAGTGAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp AACTGCGCAGCAGGAAGGGCACTTCTGAAAGCACAGTGGAGAGATCGCTGGAGCGTCTCACCGGCACTTTaGCCTGGAGCCACAGAGAAA +
Preference number: 4 (lower is better)
Translates to: NCAAGRALLKAQWRDRWSVSPAL*PGATEK
Trigger: TTTCTCTGTGGCTCCAGGCCAAAGTGCCGGTGAGAC...GCTCCAGCGATCTCTCCACTGTGCTTTCAGAAGTGCCCTTCCTGCTGCGCAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp GATTTGGTGACGACGCAGACACCCTTTGCTCTCTCCTTTCATACAGCGAGTGCCTTGACCTGCCAGCCTTaGGCCACGCCGATGACCTCA +
Preference number: 4 (lower is better)
Translates to: DLVTTQTPFALSFHTASALTCQP*ATPMTS
Trigger: TGAGGTCATCGGCGTGGCCCAAGGCTGGCAGGTCAA...GGCACTCGCTGTATGAAAGGAGAGAGCAAAGGGTGTCTGCGTCGTCACCAAATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp CAGCAGGGTAAAGACTTGCACATCACTGACAGGCGGCTCGGAGTCAGCCTTGGACTTCTGAAAGCACAGTaGAGAGATCGCTGGAGCGGG +
Preference number: 4 (lower is better)
Translates to: QQGKDLHITDRRLGVSLGLLKAQ*RDRWSG
Trigger: CCCGCTCCAGCGATCTCTCCACTGTGCTTTCAGAAG...TCCAAGGCTGACTCCGAGCCGCCTGTCAGTGATGTGCAAGTCTTTACCCTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp TCGAGGCCCTGGCAGGCCCCGACTCAACAGAACCGTCTCGCCCTCTACAGCCACGGGAGGCCGGAATGGTaGCATTATTCAATCAAATAT +
Preference number: 4 (lower is better)
Translates to: SRPWQAPTQQNRLALYSHGRPEW*HYSIKY
Trigger: ATATTTGATTGAATAATGCCACCATTCCGGCCTCCC...GTGGCTGTAGAGGGCGAGACGGTTCTGTTGAGTCGGGGCCTGCCAGGGCCTCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp ACCTCACTCTCAATACAAAAGGGACAGCACCGAAAGAACAAGGGAGGCCGGAATGCCTCTCTGCCGGCGTaGCTCTCCCCCAACCTCACT +
Preference number: 4 (lower is better)
Translates to: TSLSIQKGQHRKNKGGRNASLPA*LSPNLT
Trigger: AGTGAGGTTGGGGGAGAGCCACGCCGGCAGAGAGGC...ATTCCGGCCTCCCTTGTTCTTTCGGTGCTGTCCCTTTTGTATTGAGAGTGAGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp GTTGCGAGGGGTCTGTGTGAAGGCACTTGTCACGAGCTTCAATACTGCCGCCGTCTGCATCCACCACCTTaGCATGCCAACGCATTCGAG +
Preference number: 4 (lower is better)
Translates to: VARGLCEGTCHELQYCRRLHPPP*HANAFE
Trigger: CTCGAATGCGTTGGCATGCCAAGGTGGTGGATGCAG...ACGGCGGCAGTATTGAAGCTCGTGACAAGTGCCTTCACACAGACCCCTCGCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp TGCGCAGCAGGAAGGGCACTTCTGAAAGCACAGTGGAGAGATCGCTGGAGCGGGTTCCCAGGAAGGTTTTaGCCAAACCTGCATCCACCA +
Preference number: 4 (lower is better)
Translates to: CAAGRALLKAQWRDRWSGFPGRF*PNLHPP
Trigger: TGGTGGATGCAGGTTTGGCCAAAACCTTCCTGGGAA...CCCGCTCCAGCGATCTCTCCACTGTGCTTTCAGAAGTGCCCTTCCTGCTGCGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
3UTR CAA 72 bp CAGTTGACCTCCTACCCCTCACAGCAGGGTAAAGACTaGCACATCACTGACAGGCGGCTCGGAGTCAGCCTT +
Preference number: 4 (lower is better)
Translates to: QLTSYPSQQGKD*HITDRRLGVSL
Trigger: AAGGCTGACTCCGAGCCGCCTGTCAGTGATGTGCAAGTCTTTACCCTGCTGTGAGGGGTAGGAGGTCAACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR TCA 90 bp ACCCCTCACAGCAGGGTAAAGACTTGCACATCACTGACAGGCGGCTCGGAGTCATACAGCGATACCCGTTaGTCTCATCCACACACGTGG +
Preference number: 4 (lower is better)
Translates to: TPHSRVKTCTSLTGGSESYSDTR*SHPHTW
Trigger: CCACGTGTGTGGATGAGATCAACGGGTATCGCTGTA...TGACTCCGAGCCGCCTGTCAGTGATGTGCAAGTCTTTACCCTGCTGTGAGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR TCA 90 bp TTGCACATCACTGACAGGCGGCTCGGAGTCAGCCTTGGAGTCGGCCTTCCATGCTTTGGTGAATTTGTGTaGGAGGAACTTCTCCGCCTC +
Preference number: 4 (lower is better)
Translates to: LHITDRRLGVSLGVGLPCFGEFV*EELLRL
Trigger: GAGGCGGAGAAGTTCCTCTCACACAAATTCACCAAA...GCATGGAAGGCCGACTCCAAGGCTGACTCCGAGCCGCCTGTCAGTGATGTGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR TCA 90 bp GTTTTGGCCAAACCTGCATCCACCACCTTGGCATGCCAACGCATTCGAGGCCCTAACGCTACGATTTGGTaGCGACGCAGACACCCTTTG +
Preference number: 4 (lower is better)
Translates to: VLAKPASTTLACQRIRGPNATIW*RRRHPL
Trigger: CAAAGGGTGTCTGCGTCGTCACCAAATCGTAGCGTT...AGGGCCTCGAATGCGTTGGCATGCCAAGGTGGTGGATGCAGGTTTGGCCAAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR TCA 90 bp AACTGCGCAGCAGGAAGGGCACTTCTGAAAGCACAGTGGAGAGATCGCTGGAGCCAGGAAGGGCACTTCTaGAAGCACAGTGGAGAGATC +
Preference number: 4 (lower is better)
Translates to: NCAAGRALLKAQWRDRWSQEGHF*KHSGEI
Trigger: GATCTCTCCACTGTGCTTTCAGAAGTGCCCTTCCTG...GCTCCAGCGATCTCTCCACTGTGCTTTCAGAAGTGCCCTTCCTGCTGCGCAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR TCA 90 bp TCGAGGCCCTGGCAGGCCCCGACTCAACAGAACCGTCTCGCCCTCTACAGCCACAATTCCTTAAGACCTTaGTACGTATTCGTGGGTAAG +
Preference number: 4 (lower is better)
Translates to: SRPWQAPTQQNRLALYSHNSLRP*YVFVGK
Trigger: CTTACCCACGAATACGTATCAAGGTCTTAAGGAATT...GTGGCTGTAGAGGGCGAGACGGTTCTGTTGAGTCGGGGCCTGCCAGGGCCTCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp TTTCATACAGCGAGTGCCACGCACGGAAACTTTACAAAAATAGCAACTATCCGACGCCGTGGCCGTAGCTaGAGGGCCCCGTGGGCGTCA +
Preference number: 4 (lower is better)
Translates to: FHTASATHGNFTKIATIRRRGRS*RAPWAS
Trigger: TGACGCCCACGGGGCCCTGCAGCTACGGCCACGGCG...TCGGATAGTTGCTATTTTTGTAAAGTTTCCGTGCGTGGCACTCGCTGTATGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp GAAGGTTTTGGCCAAACCTGCATCCACCACCTTGGCATGCCAACGCATTCGAGGTTGATCATGCCGGCATaGGACACTCGCTCGATCAGC +
Preference number: 4 (lower is better)
Translates to: EGFGQTCIHHLGMPTHSRLIMPA*DTRSIS
Trigger: GCTGATCGAGCGAGTGTCGCATGCCGGCATGATCAA...CCTCGAATGCGTTGGCATGCCAAGGTGGTGGATGCAGGTTTGGCCAAAACCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp ACCTCACTCTCAATACAAAAGGGACAGCACCGAAAGAACAAGGGAGGCCGGAATACGTGGCCGCTGAAGTaGAGGCTCTTCCAGCGGTCC +
Preference number: 4 (lower is better)
Translates to: TSLSIQKGQHRKNKGGRNTWPLK*RLFQRS
Trigger: GGACCGCTGGAAGAGCCTGCACTTCAGCGGCCACGT...ATTCCGGCCTCCCTTGTTCTTTCGGTGCTGTCCCTTTTGTATTGAGAGTGAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp AACTGCGCAGCAGGAAGGGCACTTCTGAAAGCACAGTGGAGAGATCGCTGGAGCGCCGGCAGAACTTGTTaGAAGTGGCGCTGTAGTAGT +
Preference number: 4 (lower is better)
Translates to: NCAAGRALLKAQWRDRWSAGRTC*KWRCSS
Trigger: ACTACTACAGCGCCACTTGCAACAAGTTCTGCCGGC...GCTCCAGCGATCTCTCCACTGTGCTTTCAGAAGTGCCCTTCCTGCTGCGCAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp ACCTCACTCTCAATACAAAAGGGACAGCACCGAAAGAACAAGGGAGGCCGGAATAGGGCTCCACACAACTaGCATGCACGCAGCCGGGGT +
Preference number: 4 (lower is better)
Translates to: TSLSIQKGQHRKNKGGRNRAPHN*HARSRG
Trigger: ACCCCGGCTGCGTGCATGGCAGTTGTGTGGAGCCCT...ATTCCGGCCTCCCTTGTTCTTTCGGTGCTGTCCCTTTTGTATTGAGAGTGAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp ACCTCACTCTCAATACAAAAGGGACAGCACCGAAAGAACAAGGGAGGCCGGAATAGCCGTCAGGGCAGGTaGAGCGGTACTGGTCAGGCT +
Preference number: 4 (lower is better)
Translates to: TSLSIQKGQHRKNKGGRNSRQGR*SGTGQA
Trigger: AGCCTGACCAGTACCGCTGCACCTGCCCTGACGGCT...ATTCCGGCCTCCCTTGTTCTTTCGGTGCTGTCCCTTTTGTATTGAGAGTGAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp ACCTCACTCTCAATACAAAAGGGACAGCACCGAAAGAACAAGGGAGGCCGGAATGTGAGTGGCAGGTCTTaGCCTTCCAGCCGTCGTCGC +
Preference number: 4 (lower is better)
Translates to: TSLSIQKGQHRKNKGGRNVSGRS*PSSRRR
Trigger: GCGACGACGGCTGGAAGGGCAAGACCTGCCACTCAC...ATTCCGGCCTCCCTTGTTCTTTCGGTGCTGTCCCTTTTGTATTGAGAGTGAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp CAACCTCACTCTCAATACAAAAGGGACAGCACCGAAAGAACAAGGGAGGCCGGAAGCAGGTGCCACCGTTaGTGCAGGTGTAGGCATCGC +
Preference number: 4 (lower is better)
Translates to: QPHSQYKRDSTERTREAGSRCHR*CRCRHR
Trigger: GCGATGCCTACACCTGCAGCAACGGTGGCACCTGCT...TCCGGCCTCCCTTGTTCTTTCGGTGCTGTCCCTTTTGTATTGAGAGTGAGGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp ACCTCCTACCCCTCACAGCAGGGTAAAGACTTGCACATCACTGACAGGCGGCTCCGTTGGTATTGTGAGTaGAAGTACGACCCTCCCAGC +
Preference number: 4 (lower is better)
Translates to: TSYPSQQGKDLHITDRRLRWYCE*KYDPPS
Trigger: GCTGGGAGGGTCGTACTTGCACTCACAATACCAACG...GAGCCGCCTGTCAGTGATGTGCAAGTCTTTACCCTGCTGTGAGGGGTAGGAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp AATACTGCCGCCGTCCCAGGATGGGAGAACTGCGCAGCAGGAAGGGCACTTCTGCTTTCATACAGCGAGTaGCACGCACGGAAACTTTAC +
Preference number: 4 (lower is better)
Translates to: NTAAVPGWENCAAGRALLLSYSE*HARKLY
Trigger: GTAAAGTTTCCGTGCGTGGCACTCGCTGTATGAAAG...CAGAAGTGCCCTTCCTGCTGCGCAGTTCTCCCATCCTGGGACGGCGGCAGTATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp CAGCAGGGTAAAGACTTGCACATCACTGACAGGCGGCTCGGAGTCAGCCTTGGAAGCAGGGTAAAGACTTaGACATCACTGACAGGCGGC +
Preference number: 4 (lower is better)
Translates to: QQGKDLHITDRRLGVSLGSRVKT*TSLTGG
Trigger: GCCGCCTGTCAGTGATGTGCAAGTCTTTACCCTGCT...TCCAAGGCTGACTCCGAGCCGCCTGTCAGTGATGTGCAAGTCTTTACCCTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp GATTTGGTGACGACGCAGACACCCTTTGCTCTCTCCTTTCATACAGCGAGTGCCGCTCCTCATTCGGGGTaGTATCGTTGTCCCAGTCCC +
Preference number: 4 (lower is better)
Translates to: DLVTTQTPFALSFHTASAAPHSG*YRCPSP
Trigger: GGGACTGGGACAACGATACCACCCCGAATGAGGAGC...GGCACTCGCTGTATGAAAGGAGAGAGCAAAGGGTGTCTGCGTCGTCACCAAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp GATTTGGTGACGACGCAGACACCCTTTGCTCTCTCCTTTCATACAGCGAGTGCCGCACAGGGCGAGGACTaGCACTCGTCGATGTTGATG +
Preference number: 4 (lower is better)
Translates to: DLVTTQTPFALSFHTASAAQGED*HSSMLM
Trigger: CATCAACATCGACGAGTGCCAGTCCTCGCCCTGTGC...GGCACTCGCTGTATGAAAGGAGAGAGCAAAGGGTGTCTGCGTCGTCACCAAATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp ACCTCACTCTCAATACAAAAGGGACAGCACCGAAAGAACAAGGGAGGCCGGAATTTGAGCGGGGCCCACTaGTTGTTGGCGCTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: TSLSIQKGQHRKNKGGRNLSGAH*LLALSS
Trigger: GGAGGAGAGCGCCAACAACCAGTGGGCCCCGCTCAA...ATTCCGGCCTCCCTTGTTCTTTCGGTGCTGTCCCTTTTGTATTGAGAGTGAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp ACGCCGATGACCTCAGGCCCCACTAACAACCACAGGTGCGTCAACAGCCACGGGCAAGGGAGGCCGGAATaGTGGCATTATTCAATCAAA +
Preference number: 4 (lower is better)
Translates to: TPMTSGPTNNHRCVNSHGQGRPE*WHYSIK
Trigger: TTTGATTGAATAATGCCACCATTCCGGCCTCCCTTG...CCCGTGGCTGTTGACGCACCTGTGGTTGTTAGTGGGGCCTGAGGTCATCGGCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp AAGGTTTTGGCCAAACCTGCATCCACCACCTTGGCATGCCAACGCATTCGAGGCCTGCATCCACCACCTTaGCATGCCAACGCATTCGAG +
Preference number: 4 (lower is better)
Translates to: KVLAKPASTTLACQRIRGLHPPP*HANAFE
Trigger: CTCGAATGCGTTGGCATGCCAAGGTGGTGGATGCAG...GCCTCGAATGCGTTGGCATGCCAAGGTGGTGGATGCAGGTTTGGCCAAAACCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR TCA 90 bp GATTTGGTGACGACGCAGACACCCTTTGCTCTCTCCTTTCATACAGCGAGTGCCCACAGTAGAAGTCATTaGCCAGGTCGTAGCAGCGGC +
Preference number: 4 (lower is better)
Translates to: DLVTTQTPFALSFHTASAHSRSH*PGRSSG
Trigger: GCCGCTGCTACGACCTGGTCAATGACTTCTACTGTG...GGCACTCGCTGTATGAAAGGAGAGAGCAAAGGGTGTCTGCGTCGTCACCAAATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR TCA 90 bp GAAGGTTTTGGCCAAACCTGCATCCACCACCTTGGCATGCCAACGCATTCGAGGTACAGCGATACCCGTTaGTCTCATCCACACACGTGG +
Preference number: 4 (lower is better)
Translates to: EGFGQTCIHHLGMPTHSRYSDTR*SHPHTW
Trigger: CCACGTGTGTGGATGAGATCAACGGGTATCGCTGTA...CCTCGAATGCGTTGGCATGCCAAGGTGGTGGATGCAGGTTTGGCCAAAACCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR TCA 90 bp AAGGTTTTGGCCAAACCTGCATCCACCACCTTGGCATGCCAACGCATTCGAGGCAACGCTACGATTTGGTaGCGACGCAGACACCCTTTG +
Preference number: 4 (lower is better)
Translates to: KVLAKPASTTLACQRIRGNATIW*RRRHPL
Trigger: CAAAGGGTGTCTGCGTCGTCACCAAATCGTAGCGTT...GCCTCGAATGCGTTGGCATGCCAAGGTGGTGGATGCAGGTTTGGCCAAAACCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp CAACCTCACTCTCAATACAAAAGGGACAGCACCGAAAGAACAAGGGAGGCCGGACTTCCTTGCACTCCTTaGCCATCCAGCCGTCCATGC +
Preference number: 4 (lower is better)
Translates to: QPHSQYKRDSTERTREAGLPCTP*PSSRPC
Trigger: GCATGGACGGCTGGATGGGCAAGGAGTGCAAGGAAG...TCCGGCCTCCCTTGTTCTTTCGGTGCTGTCCCTTTTGTATTGAGAGTGAGGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp TGCGCAGCAGGAAGGGCACTTCTGAAAGCACAGTGGAGAGATCGCTGGAGCGGGAAAATAAAGAAACTATaGACATGGCCTCGGCCTCCG +
Preference number: 4 (lower is better)
Translates to: CAAGRALLKAQWRDRWSGKIKKL*TWPRPP
Trigger: CGGAGGCCGAGGCCATGTGCATAGTTTCTTTATTTT...CCCGCTCCAGCGATCTCTCCACTGTGCTTTCAGAAGTGCCCTTCCTGCTGCGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp TCGAGGCCCTGGCAGGCCCCGACTCAACAGAACCGTCTCGCCCTCTACAGCCACAGATTCTGTAAACAGTaGACAACCTCTGGTAACAAA +
Preference number: 4 (lower is better)
Translates to: SRPWQAPTQQNRLALYSHRFCKQ*TTSGNK
Trigger: TTTGTTACCAGAGGTTGTGCACTGTTTACAGAATCT...GTGGCTGTAGAGGGCGAGACGGTTCTGTTGAGTCGGGGCCTGCCAGGGCCTCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp GATTTGGTGACGACGCAGACACCCTTTGCTCTCTCCTTTCATACAGCGAGTGCCCATTCACACAGGGGTTaGGCAGGCAGCTGCTGTTCT +
Preference number: 4 (lower is better)
Translates to: DLVTTQTPFALSFHTASAHSHRG*AGSCCS
Trigger: AGAACAGCAGCTGCCTGCCCAACCCCTGTGTGAATG...GGCACTCGCTGTATGAAAGGAGAGAGCAAAGGGTGTCTGCGTCGTCACCAAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp TTTCATACAGCGAGTGCCACGCACGGAAACTTTACAAAAATAGCAACTATCCGAGTCCGGCAGACGGCATaGCTCCCACCGAGGGCCCTG +
Preference number: 4 (lower is better)
Translates to: FHTASATHGNFTKIATIRVRQTA*LPPRAL
Trigger: CAGGGCCCTCGGTGGGAGCCATGCCGTCTGCCGGAC...TCGGATAGTTGCTATTTTTGTAAAGTTTCCGTGCGTGGCACTCGCTGTATGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp CAACCTCACTCTCAATACAAAAGGGACAGCACCGAAAGAACAAGGGAGGCCGGAACCGGCACTTTGGCCTaGAGCCACAGAGAAACCCGA +
Preference number: 4 (lower is better)
Translates to: QPHSQYKRDSTERTREAGTGTLA*SHRETR
Trigger: TCGGGTTTCTCTGTGGCTCCAGGCCAAAGTGCCGGT...TCCGGCCTCCCTTGTTCTTTCGGTGCTGTCCCTTTTGTATTGAGAGTGAGGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp ACCTCACTCTCAATACAAAAGGGACAGCACCGAAAGAACAAGGGAGGCCGGAATAGCTCCAGGGCCAGGTaGAAGGGCTGCTTCTCTCCT +
Preference number: 4 (lower is better)
Translates to: TSLSIQKGQHRKNKGGRNSSRAR*KGCFSP
Trigger: AGGAGAGAAGCAGCCCTTCCACCTGGCCCTGGAGCT...ATTCCGGCCTCCCTTGTTCTTTCGGTGCTGTCCCTTTTGTATTGAGAGTGAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR TCA 90 bp CAGCAGGGTAAAGACTTGCACATCACTGACAGGCGGCTCGGAGTCAGCCTTGGATTTGGTGAATTTGTGTaGGAGGAACTTCTCCGCCTC +
Preference number: 4 (lower is better)
Translates to: QQGKDLHITDRRLGVSLGFGEFV*EELLRL
Trigger: GAGGCGGAGAAGTTCCTCTCACACAAATTCACCAAA...TCCAAGGCTGACTCCGAGCCGCCTGTCAGTGATGTGCAAGTCTTTACCCTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp ACCTCACTCTCAATACAAAAGGGACAGCACCGAAAGAACAAGGGAGGCCGGAATCCATCCAGCCGTCCATaGAGGCCTTGTTGCCGTACT +
Preference number: 4 (lower is better)
Translates to: TSLSIQKGQHRKNKGGRNPSSRP*RPCCRT
Trigger: AGTACGGCAACAAGGCCTGCATGGACGGCTGGATGG...ATTCCGGCCTCCCTTGTTCTTTCGGTGCTGTCCCTTTTGTATTGAGAGTGAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp GATTTGGTGACGACGCAGACACCCTTTGCTCTCTCCTTTCATACAGCGAGTGCCAGCCACTGTCACAGATaGAGGAAAAGTTGCCCCCTG +
Preference number: 4 (lower is better)
Translates to: DLVTTQTPFALSFHTASASHCHR*RKSCPL
Trigger: CAGGGGGCAACTTTTCCTGCATCTGTGACAGTGGCT...GGCACTCGCTGTATGAAAGGAGAGAGCAAAGGGTGTCTGCGTCGTCACCAAATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp TTTCATACAGCGAGTGCCACGCACGGAAACTTTACAAAAATAGCAACTATCCGACAGCAGGCGGTCCCGTaGCACAGCCCTTGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: FHTASATHGNFTKIATIRQQAVP*HSPCGW
Trigger: CCAGCCACAAGGGCTGTGGCACGGGACCGCCTGCTG...TCGGATAGTTGCTATTTTTGTAAAGTTTCCGTGCGTGGCACTCGCTGTATGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp TTTCATACAGCGAGTGCCACGCACGGAAACTTTACAAAAATAGCAACTATCCGAGCCGCCCCTACTCCTTaGCGGCGTAGCGGGCCTCAT +
Preference number: 4 (lower is better)
Translates to: FHTASATHGNFTKIATIRAAPTP*RRSGPH
Trigger: ATGAGGCCCGCTACGCCGGCAAGGAGTAGGGGCGGC...TCGGATAGTTGCTATTTTTGTAAAGTTTCCGTGCGTGGCACTCGCTGTATGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp ACCTCACTCTCAATACAAAAGGGACAGCACCGAAAGAACAAGGGAGGCCGGAATACTAACAACCACAGGTaGGTCAACAGCCACGGGCCG +
Preference number: 4 (lower is better)
Translates to: TSLSIQKGQHRKNKGGRNTNNHR*VNSHGP
Trigger: CGGCCCGTGGCTGTTGACGCACCTGTGGTTGTTAGT...ATTCCGGCCTCCCTTGTTCTTTCGGTGCTGTCCCTTTTGTATTGAGAGTGAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp CAGCAGGGTAAAGACTTGCACATCACTGACAGGCGGCTCGGAGTCAGCCTTGGATCTGGTTCTTGGCTTTaGTCCTTGACTCAGTTGACC +
Preference number: 4 (lower is better)
Translates to: QQGKDLHITDRRLGVSLGSGSWL*SLTQLT
Trigger: GGTCAACTGAGTCAAGGAGCAAAGCCAAGAACCAGA...TCCAAGGCTGACTCCGAGCCGCCTGTCAGTGATGTGCAAGTCTTTACCCTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp GCACTTGTCACGAGCTTCAATACTGCCGCCGTCCCAGGATGGGAGAACTGCGCAAGAACTTGTTGCAAGTaGCGCTGTAGTAGTTCTCGT +
Preference number: 4 (lower is better)
Translates to: ALVTSFNTAAVPGWENCARTCCK*RCSSSR
Trigger: ACGAGAACTACTACAGCGCCACTTGCAACAAGTTCT...TGCGCAGTTCTCCCATCCTGGGACGGCGGCAGTATTGAAGCTCGTGACAAGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp ACCTCACTCTCAATACAAAAGGGACAGCACCGAAAGAACAAGGGAGGCCGGAATGTGCCCTGGGGCACGTaGTCACGGTTGAAATGCAAG +
Preference number: 4 (lower is better)
Translates to: TSLSIQKGQHRKNKGGRNVPWGT*SRLKCK
Trigger: CTTGCATTTCAACCGTGACCACGTGCCCCAGGGCAC...ATTCCGGCCTCCCTTGTTCTTTCGGTGCTGTCCCTTTTGTATTGAGAGTGAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp CAACCTCACTCTCAATACAAAAGGGACAGCACCGAAAGAACAAGGGAGGCCGGAGTCTCACCGGCACTTTaGCCTGGAGCCACAGAGAAA +
Preference number: 4 (lower is better)
Translates to: QPHSQYKRDSTERTREAGVSPAL*PGATEK
Trigger: TTTCTCTGTGGCTCCAGGCCAAAGTGCCGGTGAGAC...TCCGGCCTCCCTTGTTCTTTCGGTGCTGTCCCTTTTGTATTGAGAGTGAGGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp CACATCACTGACAGGCGGCTCGGAGTCAGCCTTGGAGTCGGCCTTCCATGCCCATCTTTTGTACAGATCTaGTTCTTGGCTTTGCTCCTT +
Preference number: 4 (lower is better)
Translates to: HITDRRLGVSLGVGLPCPSFVQI*FLALLL
Trigger: AAGGAGCAAAGCCAAGAACCAGATCTGTACAAAAGA...TGGGCATGGAAGGCCGACTCCAAGGCTGACTCCGAGCCGCCTGTCAGTGATGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp TTTCATACAGCGAGTGCCACGCACGGAAACTTTACAAAAATAGCAACTATCCGAAGAAGGAGGCCCCGCTaGCCACGCAGGTGCCACCAT +
Preference number: 4 (lower is better)
Translates to: FHTASATHGNFTKIATIRRRRPR*PRRCHH
Trigger: ATGGTGGCACCTGCGTGGGCAGCGGGGCCTCCTTCT...TCGGATAGTTGCTATTTTTGTAAAGTTTCCGTGCGTGGCACTCGCTGTATGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp ACGCCGATGACCTCAGGCCCCACTAACAACCACAGGTGCGTCAACAGCCACGGGAGATTCTGTAAACAGTaGACAACCTCTGGTAACAAA +
Preference number: 4 (lower is better)
Translates to: TPMTSGPTNNHRCVNSHGRFCKQ*TTSGNK
Trigger: TTTGTTACCAGAGGTTGTGCACTGTTTACAGAATCT...CCCGTGGCTGTTGACGCACCTGTGGTTGTTAGTGGGGCCTGAGGTCATCGGCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp AAGGTTTTGGCCAAACCTGCATCCACCACCTTGGCATGCCAACGCATTCGAGGCTCTGGTTCTTGGCTTTaGTCCTTGACTCAGTTGACC +
Preference number: 4 (lower is better)
Translates to: KVLAKPASTTLACQRIRGSGSWL*SLTQLT
Trigger: GGTCAACTGAGTCAAGGAGCAAAGCCAAGAACCAGA...GCCTCGAATGCGTTGGCATGCCAAGGTGGTGGATGCAGGTTTGGCCAAAACCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp TTTCATACAGCGAGTGCCACGCACGGAAACTTTACAAAAATAGCAACTATCCGAGAGCTGTTCCCCCGCTaGGTGATGGCGGCCACGATG +
Preference number: 4 (lower is better)
Translates to: FHTASATHGNFTKIATIRELFPR*VMAATM
Trigger: CATCGTGGCCGCCATCACCCAGCGGGGGAACAGCTC...TCGGATAGTTGCTATTTTTGTAAAGTTTCCGTGCGTGGCACTCGCTGTATGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp TTTCATACAGCGAGTGCCACGCACGGAAACTTTACAAAAATAGCAACTATCCGAGCCTCTCTGCCGGCGTaGCTCTCCCCCAACCTCACT +
Preference number: 4 (lower is better)
Translates to: FHTASATHGNFTKIATIRASLPA*LSPNLT
Trigger: AGTGAGGTTGGGGGAGAGCCACGCCGGCAGAGAGGC...TCGGATAGTTGCTATTTTTGTAAAGTTTCCGTGCGTGGCACTCGCTGTATGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp CAGCAGGGTAAAGACTTGCACATCACTGACAGGCGGCTCGGAGTCAGCCTTGGAACACATTTACAAAAATaGACTTTCACGAGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: QQGKDLHITDRRLGVSLGTHLQK*TFTRRG
Trigger: GCCCCTCCTCGTGAAAGTGCATTTTTGTAAATGTGT...TCCAAGGCTGACTCCGAGCCGCCTGTCAGTGATGTGCAAGTCTTTACCCTGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp ACCTCCTACCCCTCACAGCAGGGTAAAGACTTGCACATCACTGACAGGCGGCTCTTTATTCATTTGTTCTaGCTGTGCAAGGCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: TSYPSQQGKDLHITDRRLFIHLF*LCKAAS
Trigger: TGAGGCTGCCTTGCACAGGCAGAACAAATGAATAAA...GAGCCGCCTGTCAGTGATGTGCAAGTCTTTACCCTGCTGTGAGGGGTAGGAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp AGCAGGGTAAAGACTTGCACATCACTGACAGGCGGCTCGGAGTCAGCCTTGGAGAAAAGCGTTAAGGCATaGCTTCCCTTCACACTCATT +
Preference number: 4 (lower is better)
Translates to: SRVKTCTSLTGGSESALEKSVKA*LPFTLI
Trigger: AATGAGTGTGAAGGGAAGCCATGCCTTAACGCTTTT...CTCCAAGGCTGACTCCGAGCCGCCTGTCAGTGATGTGCAAGTCTTTACCCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331782.8
CDS-3UTR CCA 90 bp TTTCATACAGCGAGTGCCACGCACGGAAACTTTACAAAAATAGCAACTATCCGACTGGAGCGGGCGTTCTaGGCAGGAGGAAGCACAGAC +
Preference number: 4 (lower is better)
Translates to: FHTASATHGNFTKIATIRLERAF*AGGSTD
Trigger: GTCTGTGCTTCCTCCTGCCCAGAACGCCCGCTCCAG...TCGGATAGTTGCTATTTTTGTAAAGTTTCCGTGCGTGGCACTCGCTGTATGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp CAACCTCACTCTCAATACAAAAGGGACAGCACCGAAAGAACAAGGGAGGCCGGATTCCCAGGAAGGTTTTaGCCAAACCTGCATCCACCA +
Preference number: 4 (lower is better)
Translates to: QPHSQYKRDSTERTREAGFPGRF*PNLHPP
Trigger: TGGTGGATGCAGGTTTGGCCAAAACCTTCCTGGGAA...TCCGGCCTCCCTTGTTCTTTCGGTGCTGTCCCTTTTGTATTGAGAGTGAGGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR TCA 90 bp TTTCATACAGCGAGTGCCACGCACGGAAACTTTACAAAAATAGCAACTATCCGACGCAGCGGAACCAGTTaGCGCCGTCAACACAGATGC +
Preference number: 4 (lower is better)
Translates to: FHTASATHGNFTKIATIRRSGTS*RRQHRC
Trigger: GCATCTGTGTTGACGGCGTCAACTGGTTCCGCTGCG...TCGGATAGTTGCTATTTTTGTAAAGTTTCCGTGCGTGGCACTCGCTGTATGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR TCA 90 bp CAGCAGGGTAAAGACTTGCACATCACTGACAGGCGGCTCGGAGTCAGCCTTGGAAATTCCTTAAGACCTTaGTACGTATTCGTGGGTAAG +
Preference number: 4 (lower is better)
Translates to: QQGKDLHITDRRLGVSLGNSLRP*YVFVGK
Trigger: CTTACCCACGAATACGTATCAAGGTCTTAAGGAATT...TCCAAGGCTGACTCCGAGCCGCCTGTCAGTGATGTGCAAGTCTTTACCCTGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp TTTCATACAGCGAGTGCCACGCACGGAAACTTTACAAAAATAGCAACTATCCGAACTCCCCAGGCACGGTaGATCCCCCGTGGAGCAAAT +
Preference number: 4 (lower is better)
Translates to: FHTASATHGNFTKIATIRTPQAR*IPRGAN
Trigger: ATTTGCTCCACGGGGGATGCACCGTGCCTGGGGAGT...TCGGATAGTTGCTATTTTTGTAAAGTTTCCGTGCGTGGCACTCGCTGTATGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp TTTCATACAGCGAGTGCCACGCACGGAAACTTTACAAAAATAGCAACTATCCGAATCCGCACCACACCTTaGTGCAGTCACGGCGGCCAT +
Preference number: 4 (lower is better)
Translates to: FHTASATHGNFTKIATIRIRTTP*CSHGGH
Trigger: ATGGCCGCCGTGACTGCAGCAAGGTGTGGTGCGGAT...TCGGATAGTTGCTATTTTTGTAAAGTTTCCGTGCGTGGCACTCGCTGTATGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp TTTCATACAGCGAGTGCCACGCACGGAAACTTTACAAAAATAGCAACTATCCGATTGACCTGCCAGCCTTaGGCCACGCCGATGACCTCA +
Preference number: 4 (lower is better)
Translates to: FHTASATHGNFTKIATIRLTCQP*ATPMTS
Trigger: TGAGGTCATCGGCGTGGCCCAAGGCTGGCAGGTCAA...TCGGATAGTTGCTATTTTTGTAAAGTTTCCGTGCGTGGCACTCGCTGTATGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
3UTR CAA 72 bp TCTCTTTTGTACAGATCTGGTTCTTGGCTTTGCTCCTaGACTCAGTTGACCTCCTACCCCTCACAGCAGGGT +
Preference number: 4 (lower is better)
Translates to: SLLYRSGSWLCS*TQLTSYPSQQG
Trigger: ACCCTGCTGTGAGGGGTAGGAGGTCAACTGAGTCAAGGAGCAAAGCCAAGAACCAGATCTGTACAAAAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CCA 90 bp GATTTGGTGACGACGCAGACACCCTTTGCTCTCTCCTTTCATACAGCGAGTGCCGGGAGGCCGGAATGGTaGCATTATTCAATCAAATAT +
Preference number: 4 (lower is better)
Translates to: DLVTTQTPFALSFHTASAGRPEW*HYSIKY
Trigger: ATATTTGATTGAATAATGCCACCATTCCGGCCTCCC...GGCACTCGCTGTATGAAAGGAGAGAGCAAAGGGTGTCTGCGTCGTCACCAAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
3UTR CAA 72 bp AAACAGTGCACAACCTCTGGTAACAAACGCTACGATTaGGTGACGACGCAGACACCCTTTGCTCTCTCCTTT +
Preference number: 4 (lower is better)
Translates to: KQCTTSGNKRYD*VTTQTPFALSF
Trigger: AAAGGAGAGAGCAAAGGGTGTCTGCGTCGTCACCAAATCGTAGCGTTTGTTACCAGAGGTTGTGCACTGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR GCA 90 bp TTTCATACAGCGAGTGCCACGCACGGAAACTTTACAAAAATAGCAACTATCCGATACACACAGCTTCCTTaGACTCCTTGCCCATCCAGC +
Preference number: 4 (lower is better)
Translates to: FHTASATHGNFTKIATIRYTQLP*TPCPSS
Trigger: GCTGGATGGGCAAGGAGTGCAAGGAAGCTGTGTGTA...TCGGATAGTTGCTATTTTTGTAAAGTTTCCGTGCGTGGCACTCGCTGTATGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR TCA 90 bp TTTCATACAGCGAGTGCCACGCACGGAAACTTTACAAAAATAGCAACTATCCGAGGCCAGGATCTTTGGTaGATTTGTGTGAGAGGAACT +
Preference number: 4 (lower is better)
Translates to: FHTASATHGNFTKIATIRGQDLW*ICVRGT
Trigger: AGTTCCTCTCACACAAATTCACCAAAGATCCTGGCC...TCGGATAGTTGCTATTTTTGTAAAGTTTCCGTGCGTGGCACTCGCTGTATGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS CCA 90 bp TCGGCCTCCGGGTCCGGCAGACGGCATGGCTCCCACCGAGGGCCCTaGGTCCCGGCCCAGCTGGCAGCCGCCCCTACTCCTTGCCGGCGT +
Preference number: 5 (lower is better)
Translates to: SASGSGRRHGSHRGP*VPAQLAAAPTPCRR
Trigger: ACGCCGGCAAGGAGTAGGGGCGGCTGCCAGCTGGGCCGGGACCCAGGGCCCTCGGTGGGAGCCATGCCGTCTGCCGGACCCGGAGGCCGA
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331782.8
ENST00000347004.2
ENST00000546616.1
CDS-3UTR CAA 90 bp CTCGGCCTCCGGGTCCGGCAGACGGCATGGCTCCCACCGAGGGCCCTGGGTCCCCCAGCAAGCGCGAGGTaGACCTGCCAGCCTTGGGCC +
Preference number: 5 (lower is better)
Translates to: LGLRVRQTAWLPPRALGPPASAR*TCQPWA
Trigger: GGCCCAAGGCTGGCAGGTCAACCTCGCGCTTGCTGG...GGGACCCAGGGCCCTCGGTGGGAGCCATGCCGTCTGCCGGACCCGGAGGCCGAG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS GCA 90 bp CAGGGTGGTCGCAGACACTGGCCTGGGGCCTTCTCCAGGCACCTTTaGCCCAGTGGGCACTGGGCGCTCAGGGCCTCGGGCTGGCCGGCC +
Preference number: 5 (lower is better)
Translates to: QGGRRHWPGAFSRHL*PSGHWALRASGWPA
Trigger: GGCCGGCCAGCCCGAGGCCCTGAGCGCCCAGTGCCCACTGGGGCAAAGGTGCCTGGAGAAGGCCCCAGGCCAGTGTCTGCGACCACCCTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331782.8
ENST00000347004.2
ENST00000546616.1
CDS-3UTR CAA 90 bp CTCGGCCTCCGGGTCCGGCAGACGGCATGGCTCCCACCGAGGGCCCTGGGTCCCGTTGACCTGCCAGCCTaGGGCCACGCCGATGACCTC +
Preference number: 5 (lower is better)
Translates to: LGLRVRQTAWLPPRALGPVDLPA*GHADDL
Trigger: GAGGTCATCGGCGTGGCCCAAGGCTGGCAGGTCAAC...GGGACCCAGGGCCCTCGGTGGGAGCCATGCCGTCTGCCGGACCCGGAGGCCGAG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS GCA 90 bp CCCAGGGACAACAGCCCTGCGGCCACAGAGGAGCCCACGTCAGGCTaGACGCTCCAACCCCCACAGCTCCCTGGGCCCCGGACTGGTCCC +
Preference number: 5 (lower is better)
Translates to: PRDNSPAATEEPTSG*TLQPPQLPGPRTGP
Trigger: GGGACCAGTCCGGGGCCCAGGGAGCTGTGGGGGTTGGAGCGTGCAGCCTGACGTGGGCTCCTCTGTGGCCGCAGGGCTGTTGTCCCTGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553244.1
CDS CCA 90 bp GCAGACGGCATGGCTCCCACCGAGGGCCCTGGGTCCCGGCCCAGCTaGCAGCCGCCCCTACTCCTTGCCGGCGTAGCGGGCCTCATTGAT +
Preference number: 5 (lower is better)
Translates to: ADGMAPTEGPGSRPS*QPPLLLAGVAGLID
Trigger: ATCAATGAGGCCCGCTACGCCGGCAAGGAGTAGGGGCGGCTGCCAGCTGGGCCGGGACCCAGGGCCCTCGGTGGGAGCCATGCCGTCTGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331782.8
ENST00000347004.2
ENST00000546616.1
CDS-3UTR CAA 90 bp GGGGCCGGCAGGTGGGCAGCGCCTGGTGCCACGGCACGCGTGGACAGTTGCGAGCCGTTGGCACACGGGTaGGAGGTGCAGGCGTGCTCA +
Preference number: 5 (lower is better)
Translates to: GAGRWAAPGATARVDSCEPLAHG*EVQACS
Trigger: TGAGCACGCCTGCACCTCCAACCCGTGTGCCAACGG...CTCGCAACTGTCCACGCGTGCCGTGGCACCAGGCGCTGCCCACCTGCCGGCCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CAA 90 bp CCTCGGCCTCCGGGTCCGGCAGACGGCATGGCTCCCACCGAGGGCCCTGGGTCCAGGCGGGCACAGTTATaGTCCAGGTGGCCGGAGCGT +
Preference number: 5 (lower is better)
Translates to: PRPPGPADGMAPTEGPGSRRAQL*SRWPER
Trigger: ACGCTCCGGCCACCTGGACAATAACTGTGCCCGCCT...GGACCCAGGGCCCTCGGTGGGAGCCATGCCGTCTGCCGGACCCGGAGGCCGAGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS CCA 90 bp TCCACCTCACAGAGAGGCCCGGAGAAGCCCTGGGGGCAGTGGCAGTaGAAGCCGTCGGCCAGGTCCTCGCAGAGGCCGCCGCTGTGGCAG +
Preference number: 5 (lower is better)
Translates to: STSQRGPEKPWGQWQ*KPSARSSQRPPLWQ
Trigger: CTGCCACAGCGGCGGCCTCTGCGAGGACCTGGCCGACGGCTTCCACTGCCACTGCCCCCAGGGCTTCTCCGGGCCTCTCTGTGAGGTGGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS CCA 90 bp TTCCCCCGCTGGGTGATGGCGGCCACGATGGCGTGGGCCGCGCCCTaGATCAGGCTGCTGTCAGGCAGGTCCCTGGCAGGGCTGAAGGAC +
Preference number: 5 (lower is better)
Translates to: FPRWVMAATMAWAAP*IRLLSGRSLAGLKD
Trigger: GTCCTTCAGCCCTGCCAGGGACCTGCCTGACAGCAGCCTGATCCAGGGCGCGGCCCACGCCATCGTGGCCGCCATCACCCAGCGGGGGAA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331782.8
ENST00000347004.2
ENST00000546616.1
CDS-3UTR CAA 90 bp GGGGCCGGCAGGTGGGCAGCGCCTGGTGCCACGGCACGCGTGGACAGTTGCGAGCCGTCCATGCAGGCCTaGTTGCCGTACTGGTCGCAG +
Preference number: 5 (lower is better)
Translates to: GAGRWAAPGATARVDSCEPSMQA*LPYWSQ
Trigger: CTGCGACCAGTACGGCAACAAGGCCTGCATGGACGG...CTCGCAACTGTCCACGCGTGCCGTGGCACCAGGCGCTGCCCACCTGCCGGCCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CAA 90 bp CTCGGCCTCCGGGTCCGGCAGACGGCATGGCTCCCACCGAGGGCCCTGGGTCCCATCGCAGAACCTCCCTaGCCAGCCGTAGCTGCACCT +
Preference number: 5 (lower is better)
Translates to: LGLRVRQTAWLPPRALGPIAEPP*PAVAAP
Trigger: AGGTGCAGCTACGGCTGGCAAGGGAGGTTCTGCGAT...GGGACCCAGGGCCCTCGGTGGGAGCCATGCCGTCTGCCGGACCCGGAGGCCGAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CAA 90 bp CTCGGCCTCCGGGTCCGGCAGACGGCATGGCTCCCACCGAGGGCCCTGGGTCCCGGCACGTGGTCACGGTaGAAATGCAAGGTGAGGCGG +
Preference number: 5 (lower is better)
Translates to: LGLRVRQTAWLPPRALGPGTWSR*KCKVRR
Trigger: CCGCCTCACCTTGCATTTCAACCGTGACCACGTGCC...GGGACCCAGGGCCCTCGGTGGGAGCCATGCCGTCTGCCGGACCCGGAGGCCGAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CAA 90 bp CCTCGGCCTCCGGGTCCGGCAGACGGCATGGCTCCCACCGAGGGCCCTGGGTCCACAACCGTCTCCACCTaGACCTCGGTGACAGCCAGG +
Preference number: 5 (lower is better)
Translates to: PRPPGPADGMAPTEGPGSTTVST*TSVTAR
Trigger: CCTGGCTGTCACCGAGGTCAAGGTGGAGACGGTTGT...GGACCCAGGGCCCTCGGTGGGAGCCATGCCGTCTGCCGGACCCGGAGGCCGAGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS CCA 90 bp AGCAGTGAGCTGTTCCCCCGCTGGGTGATGGCGGCCACGATGGCGTaGGCCGCGCCCTGGATCAGGCTGCTGTCAGGCAGGTCCCTGGCA +
Preference number: 5 (lower is better)
Translates to: SSELFPRWVMAATMA*AAPWIRLLSGRSLA
Trigger: TGCCAGGGACCTGCCTGACAGCAGCCTGATCCAGGGCGCGGCCCACGCCATCGTGGCCGCCATCACCCAGCGGGGGAACAGCTCACTGCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331782.8
ENST00000347004.2
ENST00000546616.1
CDS-3UTR CAA 90 bp CCTCGGCCTCCGGGTCCGGCAGACGGCATGGCTCCCACCGAGGGCCCTGGGTCCGGCACGGAGCAGTTCTaGCCACCAAAGTCATCAGGG +
Preference number: 5 (lower is better)
Translates to: PRPPGPADGMAPTEGPGSGTEQF*PPKSSG
Trigger: CCCTGATGACTTTGGTGGCAAGAACTGCTCCGTGCC...GGACCCAGGGCCCTCGGTGGGAGCCATGCCGTCTGCCGGACCCGGAGGCCGAGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CAA 90 bp ACTATGCACATGGCCTCGGCCTCCGGGTCCGGCAGACGGCATGGCTCCCACCGAAGCGGGGCCCACTGGTaGTTGGCGCTCTCCTCCCGC +
Preference number: 5 (lower is better)
Translates to: TMHMASASGSGRRHGSHRSGAHW*LALSSR
Trigger: GCGGGAGGAGAGCGCCAACAACCAGTGGGCCCCGCT...TCGGTGGGAGCCATGCCGTCTGCCGGACCCGGAGGCCGAGGCCATGTGCATAGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CAA 90 bp GGGGCCGGCAGGTGGGCAGCGCCTGGTGCCACGGCACGCGTGGACAGTTGCGAGCATGCCACGTTCCAGTaGGCTCAAGCAGTGAGGGGC +
Preference number: 5 (lower is better)
Translates to: GAGRWAAPGATARVDSCEHATFQ*AQAVRG
Trigger: GCCCCTCACTGCTTGAGCCAACTGGAACGTGGCATG...CTCGCAACTGTCCACGCGTGCCGTGGCACCAGGCGCTGCCCACCTGCCGGCCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS TCA 90 bp GGCCTCATTGATGCTCCTGACCGCGCGGTTGTCCACTTTGGGGCCTaGGGCCCAGTGGGCCGGCCTCCCCGGCGAGCGGCCAGGATCTTT +
Preference number: 5 (lower is better)
Translates to: GLIDAPDRAVVHFGA*GPVGRPPRRAARIF
Trigger: AAAGATCCTGGCCGCTCGCCGGGGAGGCCGGCCCACTGGGCCTCAGGCCCCAAAGTGGACAACCGCGCGGTCAGGAGCATCAATGAGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331782.8
ENST00000347004.2
ENST00000546616.1
CDS GCA 90 bp CCCCGAGGACGCCCGGTCGCAAAGCAACACCAGCAGGCGGTCCCGTaGCACAGCCCTTGTGGCTGGCAGGGAGCGGATCCCGGAGCAAAT +
Preference number: 5 (lower is better)
Translates to: PRGRPVAKQHQQAVP*HSPCGWQGADPGAN
Trigger: ATTTGCTCCGGGATCCGCTCCCTGCCAGCCACAAGGGCTGTGGCACGGGACCGCCTGCTGGTGTTGCTTTGCGACCGGGCGTCCTCGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331782.8
ENST00000347004.2
ENST00000546616.1
CDS GCA 90 bp TCTCCTCCCGCGGCAGCCGGCTCCTCTCCCGCTCTTTCCTGCGCTTaGGTGTCCACCACACGCACAGGACCACGCACGCCAGCCACAGCA +
Preference number: 5 (lower is better)
Translates to: SPPAAAGSSPALSCA*VSTTRTGPRTPATA
Trigger: TGCTGTGGCTGGCGTGCGTGGTCCTGTGCGTGTGGTGGACACGCAAGCGCAGGAAAGAGCGGGAGAGGAGCCGGCTGCCGCGGGAGGAGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331782.8
ENST00000347004.2
ENST00000546616.1
CDS-3UTR CAA 90 bp GGTGGGCAGCGCCTGGTGCCACGGCACGCGTGGACAGTTGCGAGGGGTCTGTGTCAGCGGTCCTCCGGGTaGATCATGCCGGCATGCGAC +
Preference number: 5 (lower is better)
Translates to: GGQRLVPRHAWTVARGLCQRSSG*IMPACD
Trigger: GTCGCATGCCGGCATGATCAACCCGGAGGACCGCTG...ACACAGACCCCTCGCAACTGTCCACGCGTGCCGTGGCACCAGGCGCTGCCCACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CAA 90 bp GGGGCCGGCAGGTGGGCAGCGCCTGGTGCCACGGCACGCGTGGACAGTTGCGAGACGTTGATATGGCAGTaGATGCCCTTCCAGCCCGGG +
Preference number: 5 (lower is better)
Translates to: GAGRWAAPGATARVDSCETLIWQ*MPFQPG
Trigger: CCCGGGCTGGAAGGGCATCAACTGCCATATCAACGT...CTCGCAACTGTCCACGCGTGCCGTGGCACCAGGCGCTGCCCACCTGCCGGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331782.8
CDS CCA 90 bp GCCCCCACCCACTGCTCGGGGCAGATGCACTCAAAGCCGTCCACCTaGTCCACACAGGTGCCACCGGCCGCACACGGGTTCGAAGCACAC +
Preference number: 5 (lower is better)
Translates to: APTHCSGQMHSKPST*STQVPPAAHGFEAH
Trigger: GTGTGCTTCGAACCCGTGTGCGGCCGGTGGCACCTGTGTGGACCAGGTGGACGGCTTTGAGTGCATCTGCCCCGAGCAGTGGGTGGGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS CCA 90 bp ATGCAAGGTGAGGCGGGCACAGTTATTGTCCAGGTGGCCGGAGCGTaGCAGGCAGGGGGTGCTCGGTGGCTCTTCTGCGCCGCACTCCCC +
Preference number: 5 (lower is better)
Translates to: MQGEAGTVIVQVAGA*QAGGARWLFCAALP
Trigger: GGGGAGTGCGGCGCAGAAGAGCCACCGAGCACCCCCTGCCTGCCACGCTCCGGCCACCTGGACAATAACTGTGCCCGCCTCACCTTGCAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331782.8
ENST00000347004.2
ENST00000546616.1
CDS-3UTR CAA 90 bp TCGAGGCCCTGGCAGGCCCCGACTCAACAGAACCGTCTCGCCCTCTACAGCCACGGGTTGCGGATGGGGTaGAGCGGGGCCCACTGGTTG +
Preference number: 5 (lower is better)
Translates to: SRPWQAPTQQNRLALYSHGLRMG*SGAHWL
Trigger: CAACCAGTGGGCCCCGCTCAACCCCATCCGCAACCC...GTGGCTGTAGAGGGCGAGACGGTTCTGTTGAGTCGGGGCCTGCCAGGGCCTCGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS TCA 90 bp GGCCGGCCTCCCCGGCGAGCGGCCAGGATCTTTGGTGAATTTGTGTaGGAGGAACTTCTCCGCCTCCAGGGAGTCCTCCTCACCGCGGCC +
Preference number: 5 (lower is better)
Translates to: GRPPRRAARIFGEFV*EELLRLQGVLLTAA
Trigger: GGCCGCGGTGAGGAGGACTCCCTGGAGGCGGAGAAGTTCCTCTCACACAAATTCACCAAAGATCCTGGCCGCTCGCCGGGGAGGCCGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331782.8
ENST00000347004.2
ENST00000546616.1
CDS TCA 90 bp GCGCCCGCGCTCCCGGCACCGCAGCCAACAAGTTCGGAACGAGACTaGCAGCTCGCTCGCCCATTCGTCACCCGCGCACCTGCATATGCA +
Preference number: 5 (lower is better)
Translates to: APALPAPQPTSSERD*QLARPFVTRAPAYA
Trigger: TGCATATGCAGGTGCGCGGGTGACGAATGGGCGAGCGAGCTGTCAGTCTCGTTCCGAACTTGTTGGCTGCGGTGCCGGGAGCGCGGGCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000347004.2
CDS GCA 90 bp CCGCGACAGTCGTTGACGTCCAGCTGGCAGGTGGCCCCCACCCACTaGTCGGGGCAGATGCACTCAAAGCCGTCCACCTGGTCCACACAG +
Preference number: 5 (lower is better)
Translates to: PRQSLTSSWQVAPTH*SGQMHSKPSTWSTQ
Trigger: CTGTGTGGACCAGGTGGACGGCTTTGAGTGCATCTGCCCCGAGCAGTGGGTGGGGGCCACCTGCCAGCTGGACGTCAACGACTGTCGCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000347004.2
CDS CCA 90 bp TCGATGTCAAGGGCACAGGTGGGCCCGCTCCAGCCCGATGGGCAGTaGCATTCGAAGCCGGACGGCACCTCATGGCAAGAGCCCCCGTTG +
Preference number: 5 (lower is better)
Translates to: SMSRAQVGPLQPDGQ*HSKPDGTSWQEPPL
Trigger: CAACGGGGGCTCTTGCCATGAGGTGCCGTCCGGCTTCGAATGCCACTGCCCATCGGGCTGGAGCGGGCCCACCTGTGCCCTTGACATCGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS CCA 90 bp ATGCTCCTGACCGCGCGGTTGTCCACTTTGGGGCCTGAGGCCCAGTaGGCCGGCCTCCCCGGCGAGCGGCCAGGATCTTTGGTGAATTTG +
Preference number: 5 (lower is better)
Translates to: MLLTARLSTLGPEAQ*AGLPGERPGSLVNL
Trigger: CAAATTCACCAAAGATCCTGGCCGCTCGCCGGGGAGGCCGGCCCACTGGGCCTCAGGCCCCAAAGTGGACAACCGCGCGGTCAGGAGCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331782.8
ENST00000347004.2
ENST00000546616.1
CDS-3UTR CAA 90 bp GGGGCCGGCAGGTGGGCAGCGCCTGGTGCCACGGCACGCGTGGACAGTTGCGAGCTACAGCGATACCCGTaGATCTCATCCACACACGTG +
Preference number: 5 (lower is better)
Translates to: GAGRWAAPGATARVDSCELQRYP*ISSTHV
Trigger: CACGTGTGTGGATGAGATCAACGGGTATCGCTGTAG...CTCGCAACTGTCCACGCGTGCCGTGGCACCAGGCGCTGCCCACCTGCCGGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CAA 90 bp CCACTGCCCCAAGCCTCTCTGCCGGCGTGGCTCTCCCCCAACCTCACTCTCAATGCGCGGTTGTCCACTTaGGGGCCTGAGGCCCAGTGG +
Preference number: 5 (lower is better)
Translates to: PLPQASLPAWLSPNLTLNARLST*GPEAQW
Trigger: CCACTGGGCCTCAGGCCCCAAAGTGGACAACCGCGC...ATTGAGAGTGAGGTTGGGGGAGAGCCACGCCGGCAGAGAGGCTTGGGGCAGTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CAA 90 bp GGGGCCGGCAGGTGGGCAGCGCCTGGTGCCACGGCACGCGTGGACAGTTGCGAGAACAAACGCTACGATTaGGTGACGACGCAGACACCC +
Preference number: 5 (lower is better)
Translates to: GAGRWAAPGATARVDSCENKRYD*VTTQTP
Trigger: GGGTGTCTGCGTCGTCACCAAATCGTAGCGTTTGTT...CTCGCAACTGTCCACGCGTGCCGTGGCACCAGGCGCTGCCCACCTGCCGGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS TCA 90 bp AGTAGCCGTCAGGGCAGGTGCAGCGGTACTGGTCAGGCTCGGCGTTaGTGCACGTGCCTCCGTTGGTGCAGGGGTGGTGGCTGCCACAGT +
Preference number: 5 (lower is better)
Translates to: SSRQGRCSGTGQARR*CTCLRWCRGGGCHS
Trigger: ACTGTGGCAGCCACCACCCCTGCACCAACGGAGGCACGTGCATCAACGCCGAGCCTGACCAGTACCGCTGCACCTGCCCTGACGGCTACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331782.8
ENST00000347004.2
ENST00000553051.1
CDS TCA 90 bp CGTAACAACCGTCTCCACCTTGACCTCGGTGACAGCCAGGAGCAGTaGGCTGTTCCCCCGCTGGGTGATGGCGGCCACGATGGCGTGGGC +
Preference number: 5 (lower is better)
Translates to: RNNRLHLDLGDSQEQ*AVPPLGDGGHDGVG
Trigger: GCCCACGCCATCGTGGCCGCCATCACCCAGCGGGGGAACAGCTCACTGCTCCTGGCTGTCACCGAGGTCAAGGTGGAGACGGTTGTTACG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331782.8
ENST00000347004.2
ENST00000546616.1
CDS GCA 90 bp ACACCTTGCTGCAGTCACGGCGGCCATCCAGGCAGCGGCAGCTGTTaGAGTCTTCCACCCAGGAGCTTCCGTGTGGGAACGGAGTGCCCC +
Preference number: 5 (lower is better)
Translates to: TPCCSHGGHPGSGSC*SLPPRSFRVGTECP
Trigger: GGGGCACTCCGTTCCCACACGGAAGCTCCTGGGTGGAAGACTGCAACAGCTGCCGCTGCCTGGATGGCCGCCGTGACTGCAGCAAGGTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331782.8
ENST00000347004.2
ENST00000546616.1
CDS CCA 90 bp CAGGCAGCGGCAGCTGTTGCAGTCTTCCACCCAGGAGCTTCCGTGTaGGAACGGAGTGCCCCGGGACCAGCAGGATCTCCCGAACCCGAT +
Preference number: 5 (lower is better)
Translates to: QAAAAVAVFHPGASV*ERSAPGPAGSPEPD
Trigger: ATCGGGTTCGGGAGATCCTGCTGGTCCCGGGGCACTCCGTTCCCACACGGAAGCTCCTGGGTGGAAGACTGCAACAGCTGCCGCTGCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331782.8
ENST00000347004.2
ENST00000546616.1
CDS-3UTR CAA 90 bp TCGAGGCCCTGGCAGGCCCCGACTCAACAGAACCGTCTCGCCCTCTACAGCCACTGGTCAGGCTCGGCGTaGATGCACGTGCCTCCGTTG +
Preference number: 5 (lower is better)
Translates to: SRPWQAPTQQNRLALYSHWSGSA*MHVPPL
Trigger: CAACGGAGGCACGTGCATCAACGCCGAGCCTGACCA...GTGGCTGTAGAGGGCGAGACGGTTCTGTTGAGTCGGGGCCTGCCAGGGCCTCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CAA 90 bp TCGAGGCCCTGGCAGGCCCCGACTCAACAGAACCGTCTCGCCCTCTACAGCCACAGGCAGCGGCAGCTGTaGCAGTCTTCCACCCAGGAG +
Preference number: 5 (lower is better)
Translates to: SRPWQAPTQQNRLALYSHRQRQL*QSSTQE
Trigger: CTCCTGGGTGGAAGACTGCAACAGCTGCCGCTGCCT...GTGGCTGTAGAGGGCGAGACGGTTCTGTTGAGTCGGGGCCTGCCAGGGCCTCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CAA 90 bp GCACTTGTCACGAGCTTCAATACTGCCGCCGTCCCAGGATGGGAGAACTGCGCAGGGGCCCACTGGTTGTaGGCGCTCTCCTCCCGCGGC +
Preference number: 5 (lower is better)
Translates to: ALVTSFNTAAVPGWENCAGAHWL*ALSSRG
Trigger: GCCGCGGGAGGAGAGCGCCAACAACCAGTGGGCCCC...TGCGCAGTTCTCCCATCCTGGGACGGCGGCAGTATTGAAGCTCGTGACAAGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CAA 90 bp GCCACGGGTCCCACCAACAGCCATGGGCCACACCAACACAGCCATGGGTCTCACGTTGACCTGCCAGCCTaGGGCCACGCCGATGACCTC +
Preference number: 5 (lower is better)
Translates to: ATGPTNSHGPHQHSHGSHVDLPA*GHADDL
Trigger: GAGGTCATCGGCGTGGCCCAAGGCTGGCAGGTCAAC...GTGAGACCCATGGCTGTGTTGGTGTGGCCCATGGCTGTTGGTGGGACCCGTGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS TCA 90 bp AGGCCCAGTGGGCCGGCCTCCCCGGCGAGCGGCCAGGATCTTTGGTaGATTTGTGTGAGAGGAACTTCTCCGCCTCCAGGGAGTCCTCCT +
Preference number: 5 (lower is better)
Translates to: RPSGPASPASGQDLW*ICVRGTSPPPGSPP
Trigger: AGGAGGACTCCCTGGAGGCGGAGAAGTTCCTCTCACACAAATTCACCAAAGATCCTGGCCGCTCGCCGGGGAGGCCGGCCCACTGGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331782.8
ENST00000347004.2
ENST00000546616.1
CDS GCA 90 bp CCTTCACACTCATTGGCGTCCAGCTGGCAGGTGGCCCCCACCCACTaGTCGGGGCAGATGCACTCAAAGCCGTCCACCTGGTCCACACAG +
Preference number: 5 (lower is better)
Translates to: PSHSLASSWQVAPTH*SGQMHSKPSTWSTQ
Trigger: CTGTGTGGACCAGGTGGACGGCTTTGAGTGCATCTGCCCCGAGCAGTGGGTGGGGGCCACCTGCCAGCTGGACGCCAATGAGTGTGAAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331782.8
CDS GCA 90 bp CGCAGCGGAAGGTGTCGCCGCTGTCGTAGCAGGTGCCACCGTTGCTaGAGGTGTAGGCATCGCACTGGAACTCGCGTGAGTGGCAGGTCT +
Preference number: 5 (lower is better)
Translates to: RSGRCRRCRSRCHRC*RCRHRTGTRVSGRS
Trigger: AGACCTGCCACTCACGCGAGTTCCAGTGCGATGCCTACACCTGCAGCAACGGTGGCACCTGCTACGACAGCGGCGACACCTTCCGCTGCG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331782.8
ENST00000347004.2
ENST00000553244.1
CDS GCA 90 bp ATGGCGCCCACCGTGGTGCCCTGGGGCACGTGGTCACGGTTGAAATaGAAGGTGAGGCGGGCACAGTTATTGTCCAGGTGGCCGGAGCGT +
Preference number: 5 (lower is better)
Translates to: MAPTVVPWGTWSRLK*KVRRAQLLSRWPER
Trigger: ACGCTCCGGCCACCTGGACAATAACTGTGCCCGCCTCACCTTGCATTTCAACCGTGACCACGTGCCCCAGGGCACCACGGTGGGCGCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331782.8
ENST00000347004.2
ENST00000546616.1
CDS GCA 90 bp TCGTTGTCCCAGTCCCAGGCCTCCACGATGAGGGTAAAGGAGCGCTaGAGACATGGGGAGGCGGGTCAGGTACCTGAGGCCACACCTGCC +
Preference number: 5 (lower is better)
Translates to: SLSQSQASTMRVKER*RHGEAGQVPEATPA
Trigger: GGCAGGTGTGGCCTCAGGTACCTGACCCGCCTCCCCATGTCTGCAGCGCTCCTTTACCCTCATCGTGGAGGCCTGGGACTGGGACAACGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553051.1
CDS GCA 90 bp GTCTGGCCACTCACTGATGCGGCAGTCAGGCCCCGCGAAGCCAGGTaGACACTCGCAGCGGAACCAGTTGACGCCGTCAACACAGATGCC +
Preference number: 5 (lower is better)
Translates to: VWPLTDAAVRPREAR*TLAAEPVDAVNTDA
Trigger: GGCATCTGTGTTGACGGCGTCAACTGGTTCCGCTGCGAGTGTGCACCTGGCTTCGCGGGGCCTGACTGCCGCATCAGTGAGTGGCCAGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553244.1
CDS CCA 90 bp ACACTCATCGATGTCAAGGGCACAGGTGGGCCCGCTCCAGCCCGATaGGCAGTGGCATTCGAAGCCGGACGGCACCTCATGGCAAGAGCC +
Preference number: 5 (lower is better)
Translates to: TLIDVKGTGGPAPAR*AVAFEAGRHLMARA
Trigger: GGCTCTTGCCATGAGGTGCCGTCCGGCTTCGAATGCCACTGCCCATCGGGCTGGAGCGGGCCCACCTGTGCCCTTGACATCGATGAGTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CAA 90 bp ACGCCGATGACCTCAGGCCCCACTAACAACCACAGGTGCGTCAACAGCCACGGGTGGCAAGAGCCCCCGTaGGCACACGGGTTGGAGGTG +
Preference number: 5 (lower is better)
Translates to: TPMTSGPTNNHRCVNSHGWQEPP*AHGLEV
Trigger: CACCTCCAACCCGTGTGCCAACGGGGGCTCTTGCCA...CCCGTGGCTGTTGACGCACCTGTGGTTGTTAGTGGGGCCTGAGGTCATCGGCGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CAA 90 bp GCCACGGGTCCCACCAACAGCCATGGGCCACACCAACACAGCCATGGGTCTCACAGGCAGTCGTTGGGATaGGTGTCGCAGAGCTCGCCC +
Preference number: 5 (lower is better)
Translates to: ATGPTNSHGPHQHSHGSHRQSLG*VSQSSP
Trigger: GGGCGAGCTCTGCGACACCAATCCCAACGACTGCCT...GTGAGACCCATGGCTGTGTTGGTGTGGCCCATGGCTGTTGGTGGGACCCGTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CAA 90 bp AACTGCGCAGCAGGAAGGGCACTTCTGAAAGCACAGTGGAGAGATCGCTGGAGCGGGGCCCACTGGTTGTaGGCGCTCTCCTCCCGCGGC +
Preference number: 5 (lower is better)
Translates to: NCAAGRALLKAQWRDRWSGAHWL*ALSSRG
Trigger: GCCGCGGGAGGAGAGCGCCAACAACCAGTGGGCCCC...GCTCCAGCGATCTCTCCACTGTGCTTTCAGAAGTGCCCTTCCTGCTGCGCAGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CAA 90 bp CACATCACTGACAGGCGGCTCGGAGTCAGCCTTGGAGTCGGCCTTCCATGCCCACTCCTGACCGCGCGGTaGTCCACTTTGGGGCCTGAG +
Preference number: 5 (lower is better)
Translates to: HITDRRLGVSLGVGLPCPLLTAR*STLGPE
Trigger: CTCAGGCCCCAAAGTGGACAACCGCGCGGTCAGGAG...TGGGCATGGAAGGCCGACTCCAAGGCTGACTCCGAGCCGCCTGTCAGTGATGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CAA 90 bp AATACTGCCGCCGTCCCAGGATGGGAGAACTGCGCAGCAGGAAGGGCACTTCTGCCAGCAAGCGCGAGGTaGACCTGCCAGCCTTGGGCC +
Preference number: 5 (lower is better)
Translates to: NTAAVPGWENCAAGRALLPASAR*TCQPWA
Trigger: GGCCCAAGGCTGGCAGGTCAACCTCGCGCTTGCTGG...CAGAAGTGCCCTTCCTGCTGCGCAGTTCTCCCATCCTGGGACGGCGGCAGTATT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CAA 90 bp ACTATGCACATGGCCTCGGCCTCCGGGTCCGGCAGACGGCATGGCTCCCACCGACCTGCATCCACCACCTaGGCATGCCAACGCATTCGA +
Preference number: 5 (lower is better)
Translates to: TMHMASASGSGRRHGSHRPASTT*ACQRIR
Trigger: TCGAATGCGTTGGCATGCCAAGGTGGTGGATGCAGG...TCGGTGGGAGCCATGCCGTCTGCCGGACCCGGAGGCCGAGGCCATGTGCATAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CAA 90 bp ACGCCGATGACCTCAGGCCCCACTAACAACCACAGGTGCGTCAACAGCCACGGGTGCCCGCGACAGTCGTaGACGTCCAGCTGGCAGGTG +
Preference number: 5 (lower is better)
Translates to: TPMTSGPTNNHRCVNSHGCPRQS*TSSWQV
Trigger: CACCTGCCAGCTGGACGTCAACGACTGTCGCGGGCA...CCCGTGGCTGTTGACGCACCTGTGGTTGTTAGTGGGGCCTGAGGTCATCGGCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000347004.2
CDS TCA 90 bp CAGGAAGTAGTTGTGGCCACACTGCCCTTCAAGGGACGTGGACGTTaGTGTCCCCAGACTCCTGACACCGCGGCTGGGCTGAGGGGCTCC +
Preference number: 5 (lower is better)
Translates to: QEVVVATLPFKGRGR*CPQTPDTAAGLRGS
Trigger: GGAGCCCCTCAGCCCAGCCGCGGTGTCAGGAGTCTGGGGACATCAACGTCCACGTCCCTTGAAGGGCAGTGTGGCCACAACTACTTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553244.1
CDS GCA 90 bp GCACTCGTCGATGTTGATGCGGCAGTCAGGCCCCGCGAAGCCAGGTaGACACTCGCAGCGGAACCAGTTGACGCCGTCAACACAGATGCC +
Preference number: 5 (lower is better)
Translates to: ALVDVDAAVRPREAR*TLAAEPVDAVNTDA
Trigger: GGCATCTGTGTTGACGGCGTCAACTGGTTCCGCTGCGAGTGTGCACCTGGCTTCGCGGGGCCTGACTGCCGCATCAACATCGACGAGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS GCA 90 bp AGCTGTTGCAGTCTTCCACCCAGGAGCTTCCGTGTGGGAACGGAGTaGCCCGGGACCAGCAGGATCTCCCGAACCCGATCACTTCCTGGC +
Preference number: 5 (lower is better)
Translates to: SCCSLPPRSFRVGTE*PGTSRISRTRSLPG
Trigger: GCCAGGAAGTGATCGGGTTCGGGAGATCCTGCTGGTCCCGGGGCACTCCGTTCCCACACGGAAGCTCCTGGGTGGAAGACTGCAACAGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331782.8
ENST00000347004.2
ENST00000546616.1
CDS CCA 90 bp AGTGGCATTCGAAGCCGGACGGCACCTCATGGCAAGAGCCCCCGTTaGCACACGGGTTGGAGGTGCAGGCGTGCTCAGCCTTCTCACAGT +
Preference number: 5 (lower is better)
Translates to: SGIRSRTAPHGKSPR*HTGWRCRRAQPSHS
Trigger: ACTGTGAGAAGGCTGAGCACGCCTGCACCTCCAACCCGTGTGCCAACGGGGGCTCTTGCCATGAGGTGCCGTCCGGCTTCGAATGCCACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331782.8
ENST00000347004.2
ENST00000553051.1
CDS-3UTR CAA 90 bp CACGGGTCCCACCAACAGCCATGGGCCACACCAACACAGCCATGGGTCTCACCGTGGCCGAAAAAGTCGTaGCGGGGCCGGCAGAACTTG +
Preference number: 5 (lower is better)
Translates to: HGSHQQPWATPTQPWVSPWPKKS*RGRQNL
Trigger: CAAGTTCTGCCGGCCCCGCAACGACTTTTTCGGCCA...CGGTGAGACCCATGGCTGTGTTGGTGTGGCCCATGGCTGTTGGTGGGACCCGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CAA 90 bp ACGCCGATGACCTCAGGCCCCACTAACAACCACAGGTGCGTCAACAGCCACGGGCCGTCCATGCAGGCCTaGTTGCCGTACTGGTCGCAG +
Preference number: 5 (lower is better)
Translates to: TPMTSGPTNNHRCVNSHGPSMQA*LPYWSQ
Trigger: CTGCGACCAGTACGGCAACAAGGCCTGCATGGACGG...CCCGTGGCTGTTGACGCACCTGTGGTTGTTAGTGGGGCCTGAGGTCATCGGCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CAA 90 bp AACTGCGCAGCAGGAAGGGCACTTCTGAAAGCACAGTGGAGAGATCGCTGGAGCAGCGGGGCCCACTGGTaGTTGGCGCTCTCCTCCCGC +
Preference number: 5 (lower is better)
Translates to: NCAAGRALLKAQWRDRWSSGAHW*LALSSR
Trigger: GCGGGAGGAGAGCGCCAACAACCAGTGGGCCCCGCT...GCTCCAGCGATCTCTCCACTGTGCTTTCAGAAGTGCCCTTCCTGCTGCGCAGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CAA 90 bp GCACTTGTCACGAGCTTCAATACTGCCGCCGTCCCAGGATGGGAGAACTGCGCAGGGTTGCGGATGGGGTaGAGCGGGGCCCACTGGTTG +
Preference number: 5 (lower is better)
Translates to: ALVTSFNTAAVPGWENCAGLRMG*SGAHWL
Trigger: CAACCAGTGGGCCCCGCTCAACCCCATCCGCAACCC...TGCGCAGTTCTCCCATCCTGGGACGGCGGCAGTATTGAAGCTCGTGACAAGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CAA 90 bp AATACTGCCGCCGTCCCAGGATGGGAGAACTGCGCAGCAGGAAGGGCACTTCTGCTCCTGACCGCGCGGTaGTCCACTTTGGGGCCTGAG +
Preference number: 5 (lower is better)
Translates to: NTAAVPGWENCAAGRALLLLTAR*STLGPE
Trigger: CTCAGGCCCCAAAGTGGACAACCGCGCGGTCAGGAG...CAGAAGTGCCCTTCCTGCTGCGCAGTTCTCCCATCCTGGGACGGCGGCAGTATT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CAA 90 bp GCCACGGGTCCCACCAACAGCCATGGGCCACACCAACACAGCCATGGGTCTCACCATGCCACGTTCCAGTaGGCTCAAGCAGTGAGGGGC +
Preference number: 5 (lower is better)
Translates to: ATGPTNSHGPHQHSHGSHHATFQ*AQAVRG
Trigger: GCCCCTCACTGCTTGAGCCAACTGGAACGTGGCATG...GTGAGACCCATGGCTGTGTTGGTGTGGCCCATGGCTGTTGGTGGGACCCGTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CAA 90 bp TTGCACATCACTGACAGGCGGCTCGGAGTCAGCCTTGGAGTCGGCCTTCCATGCGGCTCGGAGTCAGCCTaGGAGTCGGCCTTCCATGCC +
Preference number: 5 (lower is better)
Translates to: LHITDRRLGVSLGVGLPCGSESA*ESAFHA
Trigger: GGCATGGAAGGCCGACTCCAAGGCTGACTCCGAGCC...GCATGGAAGGCCGACTCCAAGGCTGACTCCGAGCCGCCTGTCAGTGATGTGCAA
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CAA 90 bp ACTATGCACATGGCCTCGGCCTCCGGGTCCGGCAGACGGCATGGCTCCCACCGACAGCAGGGTAAAGACTaGCACATCACTGACAGGCGG +
Preference number: 5 (lower is better)
Translates to: TMHMASASGSGRRHGSHRQQGKD*HITDRR
Trigger: CCGCCTGTCAGTGATGTGCAAGTCTTTACCCTGCTG...TCGGTGGGAGCCATGCCGTCTGCCGGACCCGGAGGCCGAGGCCATGTGCATAGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS CCA 90 bp GTCACCCTCCAGGTTATAGCAGCGAGCGCCGTTCCGGCAGGGGCTTaGCTCACAAAGGTCGACATCCACCTCACAGAGAGGCCCGGAGAA +
Preference number: 5 (lower is better)
Translates to: VTLQVIAASAVPAGA*LTKVDIHLTERPGE
Trigger: TTCTCCGGGCCTCTCTGTGAGGTGGATGTCGACCTTTGTGAGCCAAGCCCCTGCCGGAACGGCGCTCGCTGCTATAACCTGGAGGGTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CAA 90 bp TGCGCAGCAGGAAGGGCACTTCTGAAAGCACAGTGGAGAGATCGCTGGAGCGGGTTCGGGGTGGTATCGTaGTCCCAGTCCCAGGCCTCC +
Preference number: 5 (lower is better)
Translates to: CAAGRALLKAQWRDRWSGFGVVS*SQSQAS
Trigger: GGAGGCCTGGGACTGGGACAACGATACCACCCCGAA...CCCGCTCCAGCGATCTCTCCACTGTGCTTTCAGAAGTGCCCTTCCTGCTGCGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CAA 90 bp GCCGGCGTGGCTCTCCCCCAACCTCACTCTCAATACAAAAGGGACAGCACCGAATGGCAAGAGCCCCCGTaGGCACACGGGTTGGAGGTG +
Preference number: 5 (lower is better)
Translates to: AGVALPQPHSQYKRDSTEWQEPP*AHGLEV
Trigger: CACCTCCAACCCGTGTGCCAACGGGGGCTCTTGCCA...TTCGGTGCTGTCCCTTTTGTATTGAGAGTGAGGTTGGGGGAGAGCCACGCCGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CAA 90 bp CCACTGCCCCAAGCCTCTCTGCCGGCGTGGCTCTCCCCCAACCTCACTCTCAATTTCCCTTCACACTCATaGGCGTCCAGCTGGCAGGTG +
Preference number: 5 (lower is better)
Translates to: PLPQASLPAWLSPNLTLNFPSHS*ASSWQV
Trigger: CACCTGCCAGCTGGACGCCAATGAGTGTGAAGGGAA...ATTGAGAGTGAGGTTGGGGGAGAGCCACGCCGGCAGAGAGGCTTGGGGCAGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331782.8
CDS-3UTR CAA 90 bp TTGGCCAAACCTGCATCCACCACCTTGGCATGCCAACGCATTCGAGGCCCTGGCTGGCACTCGTCGATGTaGATGCGGCAGTCAGGCCCC +
Preference number: 5 (lower is better)
Translates to: LAKPASTTLACQRIRGPGWHSSM*MRQSGP
Trigger: GGGGCCTGACTGCCGCATCAACATCGACGAGTGCCA...GCCAGGGCCTCGAATGCGTTGGCATGCCAAGGTGGTGGATGCAGGTTTGGCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CAA 90 bp GCACTTGTCACGAGCTTCAATACTGCCGCCGTCCCAGGATGGGAGAACTGCGCACATCCGCACCACACCTaGCTGCAGTCACGGCGGCCA +
Preference number: 5 (lower is better)
Translates to: ALVTSFNTAAVPGWENCAHPHHT*LQSRRP
Trigger: TGGCCGCCGTGACTGCAGCAAGGTGTGGTGCGGATG...TGCGCAGTTCTCCCATCCTGGGACGGCGGCAGTATTGAAGCTCGTGACAAGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CAA 90 bp CGCCCTCTACAGCCACCACAGCCACGTGGGCCAATACCCAGCACGCGCCCCACTGAGCGGCCAGGATCTTaGGTGAATTTGTGTGAGAGG +
Preference number: 5 (lower is better)
Translates to: RPLQPPQPRGPIPSTRPTERPGS*VNLCER
Trigger: CCTCTCACACAAATTCACCAAAGATCCTGGCCGCTC...AGTGGGGCGCGTGCTGGGTATTGGCCCACGTGGCTGTGGTGGCTGTAGAGGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CAA 90 bp CCTCGGCCTCCGGGTCCGGCAGACGGCATGGCTCCCACCGAGGGCCCTGGGTCCCATTCATTTATTCATTaGTTCTGCCTGTGCAAGGCA +
Preference number: 5 (lower is better)
Translates to: PRPPGPADGMAPTEGPGSHSFIH*FCLCKA
Trigger: TGCCTTGCACAGGCAGAACAAATGAATAAATGAATG...GGACCCAGGGCCCTCGGTGGGAGCCATGCCGTCTGCCGGACCCGGAGGCCGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS TCA 90 bp AGTCAGGCCCCGCGAAGCCAGGTGCACACTCGCAGCGGAACCAGTTaGCGCCGTCAACACAGATGCCACCATTGTAGCAAGGCAGAGGGT +
Preference number: 5 (lower is better)
Translates to: SQAPRSQVHTRSGTS*RRQHRCHHCSKAEG
Trigger: ACCCTCTGCCTTGCTACAATGGTGGCATCTGTGTTGACGGCGTCAACTGGTTCCGCTGCGAGTGTGCACCTGGCTTCGCGGGGCCTGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS TCA 90 bp AGTCAGGCCCCGCGAAGCCAGGTGCACACTCGCAGCGGAACCAGTTaGCGCCGTCAACACAGATGCCACCATTGTAGCTGCAGAGCAGAG +
Preference number: 5 (lower is better)
Translates to: SQAPRSQVHTRSGTS*RRQHRCHHCSCRAE
Trigger: CTCTGCTCTGCAGCTACAATGGTGGCATCTGTGTTGACGGCGTCAACTGGTTCCGCTGCGAGTGTGCACCTGGCTTCGCGGGGCCTGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553244.1
CDS GCA 90 bp AAGTGCAGGCTCTTCCAGCGGTCCTCCGGGTTGATCATGCCGGCATaGGACACTCGCTCGATCAGCAGCTCCTCATTCGGGGTGGTATCG +
Preference number: 5 (lower is better)
Translates to: KCRLFQRSSGLIMPA*DTRSISSSSFGVVS
Trigger: CGATACCACCCCGAATGAGGAGCTGCTGATCGAGCGAGTGTCGCATGCCGGCATGATCAACCCGGAGGACCGCTGGAAGAGCCTGCACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331782.8
ENST00000347004.2
ENST00000553051.1
CDS-3UTR CAA 90 bp ACCTCCTACCCCTCACAGCAGGGTAAAGACTTGCACATCACTGACAGGCGGCTCATGCACGTGCCTCCGTaGGTGCAGGGGTGGTGGCTG +
Preference number: 5 (lower is better)
Translates to: TSYPSQQGKDLHITDRRLMHVPP*VQGWWL
Trigger: CAGCCACCACCCCTGCACCAACGGAGGCACGTGCAT...GAGCCGCCTGTCAGTGATGTGCAAGTCTTTACCCTGCTGTGAGGGGTAGGAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CAA 90 bp AACTGCGCAGCAGGAAGGGCACTTCTGAAAGCACAGTGGAGAGATCGCTGGAGCATGCACGTGCCTCCGTaGGTGCAGGGGTGGTGGCTG +
Preference number: 5 (lower is better)
Translates to: NCAAGRALLKAQWRDRWSMHVPP*VQGWWL
Trigger: CAGCCACCACCCCTGCACCAACGGAGGCACGTGCAT...GCTCCAGCGATCTCTCCACTGTGCTTTCAGAAGTGCCCTTCCTGCTGCGCAGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CAA 90 bp GTTGCGAGGGGTCTGTGTGAAGGCACTTGTCACGAGCTTCAATACTGCCGCCGTCCGTTGGCACACGGGTaGGAGGTGCAGGCGTGCTCA +
Preference number: 5 (lower is better)
Translates to: VARGLCEGTCHELQYCRRPLAHG*EVQACS
Trigger: TGAGCACGCCTGCACCTCCAACCCGTGTGCCAACGG...ACGGCGGCAGTATTGAAGCTCGTGACAAGTGCCTTCACACAGACCCCTCGCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CAA 90 bp TTGGCCAAACCTGCATCCACCACCTTGGCATGCCAACGCATTCGAGGCCCTGGCCGTTCCGGCAGGGGCTaGGCTCACAAAGGTCGACAT +
Preference number: 5 (lower is better)
Translates to: LAKPASTTLACQRIRGPGRSGRG*AHKGRH
Trigger: ATGTCGACCTTTGTGAGCCAAGCCCCTGCCGGAACG...GCCAGGGCCTCGAATGCGTTGGCATGCCAAGGTGGTGGATGCAGGTTTGGCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CAA 90 bp GTTGCGAGGGGTCTGTGTGAAGGCACTTGTCACGAGCTTCAATACTGCCGCCGTCATCCGCACCACACCTaGCTGCAGTCACGGCGGCCA +
Preference number: 5 (lower is better)
Translates to: VARGLCEGTCHELQYCRRHPHHT*LQSRRP
Trigger: TGGCCGCCGTGACTGCAGCAAGGTGTGGTGCGGATG...ACGGCGGCAGTATTGAAGCTCGTGACAAGTGCCTTCACACAGACCCCTCGCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CAA 90 bp GTTGCGAGGGGTCTGTGTGAAGGCACTTGTCACGAGCTTCAATACTGCCGCCGTCTTCTCCAGGCACCTTaGCCCCAGTGGGCACTGGGC +
Preference number: 5 (lower is better)
Translates to: VARGLCEGTCHELQYCRRLLQAP*PQWALG
Trigger: GCCCAGTGCCCACTGGGGCAAAGGTGCCTGGAGAAG...ACGGCGGCAGTATTGAAGCTCGTGACAAGTGCCTTCACACAGACCCCTCGCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CAA 90 bp AAGGTTTTGGCCAAACCTGCATCCACCACCTTGGCATGCCAACGCATTCGAGGCGCGCGGTTGTCCACTTaGGGGCCTGAGGCCCAGTGG +
Preference number: 5 (lower is better)
Translates to: KVLAKPASTTLACQRIRGARLST*GPEAQW
Trigger: CCACTGGGCCTCAGGCCCCAAAGTGGACAACCGCGC...GCCTCGAATGCGTTGGCATGCCAAGGTGGTGGATGCAGGTTTGGCCAAAACCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CAA 90 bp AACTGCGCAGCAGGAAGGGCACTTCTGAAAGCACAGTGGAGAGATCGCTGGAGCGGCTCGGAGTCAGCCTaGGAGTCGGCCTTCCATGCC +
Preference number: 5 (lower is better)
Translates to: NCAAGRALLKAQWRDRWSGSESA*ESAFHA
Trigger: GGCATGGAAGGCCGACTCCAAGGCTGACTCCGAGCC...GCTCCAGCGATCTCTCCACTGTGCTTTCAGAAGTGCCCTTCCTGCTGCGCAGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CAA 90 bp ACTATGCACATGGCCTCGGCCTCCGGGTCCGGCAGACGGCATGGCTCCCACCGATCTTGGCTTTGCTCCTaGACTCAGTTGACCTCCTAC +
Preference number: 5 (lower is better)
Translates to: TMHMASASGSGRRHGSHRSWLCS*TQLTSY
Trigger: GTAGGAGGTCAACTGAGTCAAGGAGCAAAGCCAAGA...TCGGTGGGAGCCATGCCGTCTGCCGGACCCGGAGGCCGAGGCCATGTGCATAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CAA 90 bp GTTGCGAGGGGTCTGTGTGAAGGCACTTGTCACGAGCTTCAATACTGCCGCCGTCCCGTGGGCGTCACCTaGGCCTGGTACTCCTTAAGG +
Preference number: 5 (lower is better)
Translates to: VARGLCEGTCHELQYCRRPVGVT*AWYSLR
Trigger: CCTTAAGGAGTACCAGGCCAAGGTGACGCCCACGGG...ACGGCGGCAGTATTGAAGCTCGTGACAAGTGCCTTCACACAGACCCCTCGCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CAA 90 bp ACCTCCTACCCCTCACAGCAGGGTAAAGACTTGCACATCACTGACAGGCGGCTCCCCGTGGGCGTCACCTaGGCCTGGTACTCCTTAAGG +
Preference number: 5 (lower is better)
Translates to: TSYPSQQGKDLHITDRRLPVGVT*AWYSLR
Trigger: CCTTAAGGAGTACCAGGCCAAGGTGACGCCCACGGG...GAGCCGCCTGTCAGTGATGTGCAAGTCTTTACCCTGCTGTGAGGGGTAGGAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CAA 90 bp GCCGGCGTGGCTCTCCCCCAACCTCACTCTCAATACAAAAGGGACAGCACCGAACAGATGCAGGAAAAGTaGCCCCCTGGCTGGCTGACG +
Preference number: 5 (lower is better)
Translates to: AGVALPQPHSQYKRDSTEQMQEK*PPGWLT
Trigger: CGTCAGCCAGCCAGGGGGCAACTTTTCCTGCATCTG...TTCGGTGCTGTCCCTTTTGTATTGAGAGTGAGGTTGGGGGAGAGCCACGCCGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CAA 90 bp CAGCAGGGTAAAGACTTGCACATCACTGACAGGCGGCTCGGAGTCAGCCTTGGAAGGCAGTCGTTGGGATaGGTGTCGCAGAGCTCGCCC +
Preference number: 5 (lower is better)
Translates to: QQGKDLHITDRRLGVSLGRQSLG*VSQSSP
Trigger: GGGCGAGCTCTGCGACACCAATCCCAACGACTGCCT...TCCAAGGCTGACTCCGAGCCGCCTGTCAGTGATGTGCAAGTCTTTACCCTGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CAA 90 bp GCACTTGTCACGAGCTTCAATACTGCCGCCGTCCCAGGATGGGAGAACTGCGCATCGGGAAGGCAGTCGTaGGGATTGGTGTCGCAGAGC +
Preference number: 5 (lower is better)
Translates to: ALVTSFNTAAVPGWENCASGRQS*GLVSQS
Trigger: GCTCTGCGACACCAATCCCAACGACTGCCTTCCCGA...TGCGCAGTTCTCCCATCCTGGGACGGCGGCAGTATTGAAGCTCGTGACAAGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CAA 90 bp GCACTTGTCACGAGCTTCAATACTGCCGCCGTCCCAGGATGGGAGAACTGCGCAGGCACGTGGTCACGGTaGAAATGCAAGGTGAGGCGG +
Preference number: 5 (lower is better)
Translates to: ALVTSFNTAAVPGWENCAGTWSR*KCKVRR
Trigger: CCGCCTCACCTTGCATTTCAACCGTGACCACGTGCC...TGCGCAGTTCTCCCATCCTGGGACGGCGGCAGTATTGAAGCTCGTGACAAGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CAA 90 bp CACGGGTCCCACCAACAGCCATGGGCCACACCAACACAGCCATGGGTCTCACCGCGACGCAGACACCCTTaGCTCTCTCCTTTCATACAG +
Preference number: 5 (lower is better)
Translates to: HGSHQQPWATPTQPWVSPRRRHP*LSPFIQ
Trigger: CTGTATGAAAGGAGAGAGCAAAGGGTGTCTGCGTCG...CGGTGAGACCCATGGCTGTGTTGGTGTGGCCCATGGCTGTTGGTGGGACCCGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CAA 90 bp GCCACGGGTCCCACCAACAGCCATGGGCCACACCAACACAGCCATGGGTCTCACCGACGCAGACACCCTTaGCTCTCTCCTTTCATACAG +
Preference number: 5 (lower is better)
Translates to: ATGPTNSHGPHQHSHGSHRRRHP*LSPFIQ
Trigger: CTGTATGAAAGGAGAGAGCAAAGGGTGTCTGCGTCG...GTGAGACCCATGGCTGTGTTGGTGTGGCCCATGGCTGTTGGTGGGACCCGTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CAA 90 bp AATACTGCCGCCGTCCCAGGATGGGAGAACTGCGCAGCAGGAAGGGCACTTCTGCCTGCATCCACCACCTaGGCATGCCAACGCATTCGA +
Preference number: 5 (lower is better)
Translates to: NTAAVPGWENCAAGRALLPASTT*ACQRIR
Trigger: TCGAATGCGTTGGCATGCCAAGGTGGTGGATGCAGG...CAGAAGTGCCCTTCCTGCTGCGCAGTTCTCCCATCCTGGGACGGCGGCAGTATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CAA 90 bp ACTATGCACATGGCCTCGGCCTCCGGGTCCGGCAGACGGCATGGCTCCCACCGAGTACAGATCTGGTTCTaGGCTTTGCTCCTTGACTCA +
Preference number: 5 (lower is better)
Translates to: TMHMASASGSGRRHGSHRVQIWF*ALLLDS
Trigger: TGAGTCAAGGAGCAAAGCCAAGAACCAGATCTGTAC...TCGGTGGGAGCCATGCCGTCTGCCGGACCCGGAGGCCGAGGCCATGTGCATAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CAA 90 bp GAAGGTTTTGGCCAAACCTGCATCCACCACCTTGGCATGCCAACGCATTCGAGGTTCGGGGTGGTATCGTaGTCCCAGTCCCAGGCCTCC +
Preference number: 5 (lower is better)
Translates to: EGFGQTCIHHLGMPTHSRFGVVS*SQSQAS
Trigger: GGAGGCCTGGGACTGGGACAACGATACCACCCCGAA...CCTCGAATGCGTTGGCATGCCAAGGTGGTGGATGCAGGTTTGGCCAAAACCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CAA 90 bp GTTGCGAGGGGTCTGTGTGAAGGCACTTGTCACGAGCTTCAATACTGCCGCCGTTCCATGCAGGCCTTGTaGCCGTACTGGTCGCAGGTG +
Preference number: 5 (lower is better)
Translates to: VARGLCEGTCHELQYCRRSMQAL*PYWSQV
Trigger: CACCTGCGACCAGTACGGCAACAAGGCCTGCATGGA...ACGGCGGCAGTATTGAAGCTCGTGACAAGTGCCTTCACACAGACCCCTCGCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CAA 90 bp CAGCAGGGTAAAGACTTGCACATCACTGACAGGCGGCTCGGAGTCAGCCTTGGACGTTCCGGCAGGGGCTaGGCTCACAAAGGTCGACAT +
Preference number: 5 (lower is better)
Translates to: QQGKDLHITDRRLGVSLGRSGRG*AHKGRH
Trigger: ATGTCGACCTTTGTGAGCCAAGCCCCTGCCGGAACG...TCCAAGGCTGACTCCGAGCCGCCTGTCAGTGATGTGCAAGTCTTTACCCTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CAA 90 bp GCACTTGTCACGAGCTTCAATACTGCCGCCGTCCCAGGATGGGAGAACTGCGCAGGCACGGAGCAGTTCTaGCCACCAAAGTCATCAGGG +
Preference number: 5 (lower is better)
Translates to: ALVTSFNTAAVPGWENCAGTEQF*PPKSSG
Trigger: CCCTGATGACTTTGGTGGCAAGAACTGCTCCGTGCC...TGCGCAGTTCTCCCATCCTGGGACGGCGGCAGTATTGAAGCTCGTGACAAGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CAA 90 bp GTTTTGGCCAAACCTGCATCCACCACCTTGGCATGCCAACGCATTCGAGGCCCTCAGATGCAGGAAAAGTaGCCCCCTGGCTGGCTGACG +
Preference number: 5 (lower is better)
Translates to: VLAKPASTTLACQRIRGPQMQEK*PPGWLT
Trigger: CGTCAGCCAGCCAGGGGGCAACTTTTCCTGCATCTG...AGGGCCTCGAATGCGTTGGCATGCCAAGGTGGTGGATGCAGGTTTGGCCAAAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CAA 90 bp GTTGCGAGGGGTCTGTGTGAAGGCACTTGTCACGAGCTTCAATACTGCCGCCGTCCATTCACACAGGGGTaGGGCAGGCAGCTGCTGTTC +
Preference number: 5 (lower is better)
Translates to: VARGLCEGTCHELQYCRRPFTQG*GRQLLF
Trigger: GAACAGCAGCTGCCTGCCCAACCCCTGTGTGAATGG...ACGGCGGCAGTATTGAAGCTCGTGACAAGTGCCTTCACACAGACCCCTCGCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CAA 90 bp AGCAGGGTAAAGACTTGCACATCACTGACAGGCGGCTCGGAGTCAGCCTTGGAGCCATTCACACAGGGGTaGGGCAGGCAGCTGCTGTTC +
Preference number: 5 (lower is better)
Translates to: SRVKTCTSLTGGSESALEPFTQG*GRQLLF
Trigger: GAACAGCAGCTGCCTGCCCAACCCCTGTGTGAATGG...CTCCAAGGCTGACTCCGAGCCGCCTGTCAGTGATGTGCAAGTCTTTACCCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CAA 90 bp CAACCTCACTCTCAATACAAAAGGGACAGCACCGAAAGAACAAGGGAGGCCGGAGGCCGCTCAATGGGGTaGCGGATGGGGTTGAGCGGG +
Preference number: 5 (lower is better)
Translates to: QPHSQYKRDSTERTREAGGRSMG*RMGLSG
Trigger: CCCGCTCAACCCCATCCGCAACCCCATTGAGCGGCC...TCCGGCCTCCCTTGTTCTTTCGGTGCTGTCCCTTTTGTATTGAGAGTGAGGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CAA 90 bp GTTTTGGCCAAACCTGCATCCACCACCTTGGCATGCCAACGCATTCGAGGCCCTGGTCTCACCGGCACTTaGGCCTGGAGCCACAGAGAA +
Preference number: 5 (lower is better)
Translates to: VLAKPASTTLACQRIRGPGLTGT*AWSHRE
Trigger: TTCTCTGTGGCTCCAGGCCAAAGTGCCGGTGAGACC...AGGGCCTCGAATGCGTTGGCATGCCAAGGTGGTGGATGCAGGTTTGGCCAAAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CAA 90 bp CGCCCTCTACAGCCACCACAGCCACGTGGGCCAATACCCAGCACGCGCCCCACTGAGCAAATTACACCCTaGTTTACACACAGCTTCCTT +
Preference number: 5 (lower is better)
Translates to: RPLQPPQPRGPIPSTRPTEQITP*FTHSFL
Trigger: AAGGAAGCTGTGTGTAAACAAGGGTGTAATTTGCTC...AGTGGGGCGCGTGCTGGGTATTGGCCCACGTGGCTGTGGTGGCTGTAGAGGGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CAA 90 bp AAGGTTTTGGCCAAACCTGCATCCACCACCTTGGCATGCCAACGCATTCGAGGCTCGGGAAGGCAGTCGTaGGGATTGGTGTCGCAGAGC +
Preference number: 5 (lower is better)
Translates to: KVLAKPASTTLACQRIRGSGRQS*GLVSQS
Trigger: GCTCTGCGACACCAATCCCAACGACTGCCTTCCCGA...GCCTCGAATGCGTTGGCATGCCAAGGTGGTGGATGCAGGTTTGGCCAAAACCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CAA 90 bp GCCACGGGTCCCACCAACAGCCATGGGCCACACCAACACAGCCATGGGTCTCACCATCAAATGCTGACCTaGCCTCTGAATGACCAAGCA +
Preference number: 5 (lower is better)
Translates to: ATGPTNSHGPHQHSHGSHHQMLT*PLNDQA
Trigger: TGCTTGGTCATTCAGAGGCAAGGTCAGCATTTGATG...GTGAGACCCATGGCTGTGTTGGTGTGGCCCATGGCTGTTGGTGGGACCCGTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CAA 90 bp GCCGGCGTGGCTCTCCCCCAACCTCACTCTCAATACAAAAGGGACAGCACCGAATGCTCCTTGACTCAGTaGACCTCCTACCCCTCACAG +
Preference number: 5 (lower is better)
Translates to: AGVALPQPHSQYKRDSTECSLTQ*TSYPSQ
Trigger: CTGTGAGGGGTAGGAGGTCAACTGAGTCAAGGAGCA...TTCGGTGCTGTCCCTTTTGTATTGAGAGTGAGGTTGGGGGAGAGCCACGCCGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CAA 90 bp GATTTGGTGACGACGCAGACACCCTTTGCTCTCTCCTTTCATACAGCGAGTGCCTGGCCGAAAAAGTCGTaGCGGGGCCGGCAGAACTTG +
Preference number: 5 (lower is better)
Translates to: DLVTTQTPFALSFHTASAWPKKS*RGRQNL
Trigger: CAAGTTCTGCCGGCCCCGCAACGACTTTTTCGGCCA...GGCACTCGCTGTATGAAAGGAGAGAGCAAAGGGTGTCTGCGTCGTCACCAAATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CAA 90 bp GATTTGGTGACGACGCAGACACCCTTTGCTCTCTCCTTTCATACAGCGAGTGCCTCCATGCAGGCCTTGTaGCCGTACTGGTCGCAGGTG +
Preference number: 5 (lower is better)
Translates to: DLVTTQTPFALSFHTASASMQAL*PYWSQV
Trigger: CACCTGCGACCAGTACGGCAACAAGGCCTGCATGGA...GGCACTCGCTGTATGAAAGGAGAGAGCAAAGGGTGTCTGCGTCGTCACCAAATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CAA 90 bp GATTTGGTGACGACGCAGACACCCTTTGCTCTCTCCTTTCATACAGCGAGTGCCATCGCAGAACCTCCCTaGCCAGCCGTAGCTGCACCT +
Preference number: 5 (lower is better)
Translates to: DLVTTQTPFALSFHTASAIAEPP*PAVAAP
Trigger: AGGTGCAGCTACGGCTGGCAAGGGAGGTTCTGCGAT...GGCACTCGCTGTATGAAAGGAGAGAGCAAAGGGTGTCTGCGTCGTCACCAAATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CAA 90 bp AGCAGGGTAAAGACTTGCACATCACTGACAGGCGGCTCGGAGTCAGCCTTGGAGTGCCCGCGACAGTCGTaGACGTTGATATGGCAGTTG +
Preference number: 5 (lower is better)
Translates to: SRVKTCTSLTGGSESALECPRQS*TLIWQL
Trigger: CAACTGCCATATCAACGTCAACGACTGTCGCGGGCA...CTCCAAGGCTGACTCCGAGCCGCCTGTCAGTGATGTGCAAGTCTTTACCCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331782.8
CDS-3UTR CAA 90 bp CAACCTCACTCTCAATACAAAAGGGACAGCACCGAAAGAACAAGGGAGGCCGGAAGGCAGCGGCAGCTGTaGCAGTCTTCCACCCAGGAG +
Preference number: 5 (lower is better)
Translates to: QPHSQYKRDSTERTREAGRQRQL*QSSTQE
Trigger: CTCCTGGGTGGAAGACTGCAACAGCTGCCGCTGCCT...TCCGGCCTCCCTTGTTCTTTCGGTGCTGTCCCTTTTGTATTGAGAGTGAGGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CAA 90 bp ACCTCCTACCCCTCACAGCAGGGTAAAGACTTGCACATCACTGACAGGCGGCTCTGCTCCTTGACTCAGTaGACCTCCTACCCCTCACAG +
Preference number: 5 (lower is better)
Translates to: TSYPSQQGKDLHITDRRLCSLTQ*TSYPSQ
Trigger: CTGTGAGGGGTAGGAGGTCAACTGAGTCAAGGAGCA...GAGCCGCCTGTCAGTGATGTGCAAGTCTTTACCCTGCTGTGAGGGGTAGGAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CAA 90 bp AACTGCGCAGCAGGAAGGGCACTTCTGAAAGCACAGTGGAGAGATCGCTGGAGCCGACAGTCGTTGACGTaGATATGGCAGTTGATGCCC +
Preference number: 5 (lower is better)
Translates to: NCAAGRALLKAQWRDRWSRQSLT*IWQLMP
Trigger: GGGCATCAACTGCCATATCAACGTCAACGACTGTCG...GCTCCAGCGATCTCTCCACTGTGCTTTCAGAAGTGCCCTTCCTGCTGCGCAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331782.8
CDS-3UTR CAA 90 bp GATTTGGTGACGACGCAGACACCCTTTGCTCTCTCCTTTCATACAGCGAGTGCCTCGCAGCGGAACCAGTaGACGCCGTCAACACAGATG +
Preference number: 5 (lower is better)
Translates to: DLVTTQTPFALSFHTASASQRNQ*TPSTQM
Trigger: CATCTGTGTTGACGGCGTCAACTGGTTCCGCTGCGA...GGCACTCGCTGTATGAAAGGAGAGAGCAAAGGGTGTCTGCGTCGTCACCAAATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CAA 90 bp GTTTTGGCCAAACCTGCATCCACCACCTTGGCATGCCAACGCATTCGAGGCCCTATTCCCAGGAAGGTTTaGGCCAAACCTGCATCCACC +
Preference number: 5 (lower is better)
Translates to: VLAKPASTTLACQRIRGPIPRKV*AKPAST
Trigger: GGTGGATGCAGGTTTGGCCAAAACCTTCCTGGGAAT...AGGGCCTCGAATGCGTTGGCATGCCAAGGTGGTGGATGCAGGTTTGGCCAAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CAA 90 bp AGCAGGGTAAAGACTTGCACATCACTGACAGGCGGCTCGGAGTCAGCCTTGGAGATTCCCAGGAAGGTTTaGGCCAAACCTGCATCCACC +
Preference number: 5 (lower is better)
Translates to: SRVKTCTSLTGGSESALEIPRKV*AKPAST
Trigger: GGTGGATGCAGGTTTGGCCAAAACCTTCCTGGGAAT...CTCCAAGGCTGACTCCGAGCCGCCTGTCAGTGATGTGCAAGTCTTTACCCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CAA 90 bp TTGCACATCACTGACAGGCGGCTCGGAGTCAGCCTTGGAGTCGGCCTTCCATGCCCGCCAATCAGGTTTTaGCAAGAAAAAGCGTTAAGG +
Preference number: 5 (lower is better)
Translates to: LHITDRRLGVSLGVGLPCPPIRF*QEKALR
Trigger: CCTTAACGCTTTTTCTTGCAAAAACCTGATTGGCGG...GCATGGAAGGCCGACTCCAAGGCTGACTCCGAGCCGCCTGTCAGTGATGTGCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331782.8
CDS-3UTR CAA 90 bp TTGCACATCACTGACAGGCGGCTCGGAGTCAGCCTTGGAGTCGGCCTTCCATGCGGATCTTTGGTGAATTaGTGTGAGAGGAACTTCTCC +
Preference number: 5 (lower is better)
Translates to: LHITDRRLGVSLGVGLPCGSLVN*CERNFS
Trigger: GGAGAAGTTCCTCTCACACAAATTCACCAAAGATCC...GCATGGAAGGCCGACTCCAAGGCTGACTCCGAGCCGCCTGTCAGTGATGTGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CAA 90 bp ACCTCACTCTCAATACAAAAGGGACAGCACCGAAAGAACAAGGGAGGCCGGAATGGTCTCACCGGCACTTaGGCCTGGAGCCACAGAGAA +
Preference number: 5 (lower is better)
Translates to: TSLSIQKGQHRKNKGGRNGLTGT*AWSHRE
Trigger: TTCTCTGTGGCTCCAGGCCAAAGTGCCGGTGAGACC...ATTCCGGCCTCCCTTGTTCTTTCGGTGCTGTCCCTTTTGTATTGAGAGTGAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CAA 90 bp AACTGCGCAGCAGGAAGGGCACTTCTGAAAGCACAGTGGAGAGATCGCTGGAGCTCTTGGCTTTGCTCCTaGACTCAGTTGACCTCCTAC +
Preference number: 5 (lower is better)
Translates to: NCAAGRALLKAQWRDRWSSWLCS*TQLTSY
Trigger: GTAGGAGGTCAACTGAGTCAAGGAGCAAAGCCAAGA...GCTCCAGCGATCTCTCCACTGTGCTTTCAGAAGTGCCCTTCCTGCTGCGCAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS CCA 90 bp GTAATAGCCGCCAATCAGGTTTTTGCAAGAAAAAGCGTTAAGGCATaGCTTCCCTTCACACTCATTGGCGTCCAGCTGGCAGGTGGCCCC +
Preference number: 5 (lower is better)
Translates to: VIAANQVFARKSVKA*LPFTLIGVQLAGGP
Trigger: GGGGCCACCTGCCAGCTGGACGCCAATGAGTGTGAAGGGAAGCCATGCCTTAACGCTTTTTCTTGCAAAAACCTGATTGGCGGCTATTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000331782.8
CDS-3UTR CAA 90 bp GATTTGGTGACGACGCAGACACCCTTTGCTCTCTCCTTTCATACAGCGAGTGCCCTACAGCGATACCCGTaGATCTCATCCACACACGTG +
Preference number: 5 (lower is better)
Translates to: DLVTTQTPFALSFHTASALQRYP*ISSTHV
Trigger: CACGTGTGTGGATGAGATCAACGGGTATCGCTGTAG...GGCACTCGCTGTATGAAAGGAGAGAGCAAAGGGTGTCTGCGTCGTCACCAAATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CAA 90 bp ACCCCTCACAGCAGGGTAAAGACTTGCACATCACTGACAGGCGGCTCGGAGTCACATCAAATGCTGACCTaGCCTCTGAATGACCAAGCA +
Preference number: 5 (lower is better)
Translates to: TPHSRVKTCTSLTGGSESHQMLT*PLNDQA
Trigger: TGCTTGGTCATTCAGAGGCAAGGTCAGCATTTGATG...TGACTCCGAGCCGCCTGTCAGTGATGTGCAAGTCTTTACCCTGCTGTGAGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CAA 90 bp CAACCTCACTCTCAATACAAAAGGGACAGCACCGAAAGAACAAGGGAGGCCGGACAGCAGGGTAAAGACTaGCACATCACTGACAGGCGG +
Preference number: 5 (lower is better)
Translates to: QPHSQYKRDSTERTREAGQQGKD*HITDRR
Trigger: CCGCCTGTCAGTGATGTGCAAGTCTTTACCCTGCTG...TCCGGCCTCCCTTGTTCTTTCGGTGCTGTCCCTTTTGTATTGAGAGTGAGGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CAA 90 bp TTTCATACAGCGAGTGCCACGCACGGAAACTTTACAAAAATAGCAACTATCCGACTTCTCCAGGCACCTTaGCCCCAGTGGGCACTGGGC +
Preference number: 5 (lower is better)
Translates to: FHTASATHGNFTKIATIRLLQAP*PQWALG
Trigger: GCCCAGTGCCCACTGGGGCAAAGGTGCCTGGAGAAG...TCGGATAGTTGCTATTTTTGTAAAGTTTCCGTGCGTGGCACTCGCTGTATGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CAA 90 bp AGCAGGGTAAAGACTTGCACATCACTGACAGGCGGCTCGGAGTCAGCCTTGGAGGGATCTTTGGTGAATTaGTGTGAGAGGAACTTCTCC +
Preference number: 5 (lower is better)
Translates to: SRVKTCTSLTGGSESALEGSLVN*CERNFS
Trigger: GGAGAAGTTCCTCTCACACAAATTCACCAAAGATCC...CTCCAAGGCTGACTCCGAGCCGCCTGTCAGTGATGTGCAAGTCTTTACCCTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CAA 90 bp GAAGGTTTTGGCCAAACCTGCATCCACCACCTTGGCATGCCAACGCATTCGAGGGTACAGATCTGGTTCTaGGCTTTGCTCCTTGACTCA +
Preference number: 5 (lower is better)
Translates to: EGFGQTCIHHLGMPTHSRVQIWF*ALLLDS
Trigger: TGAGTCAAGGAGCAAAGCCAAGAACCAGATCTGTAC...CCTCGAATGCGTTGGCATGCCAAGGTGGTGGATGCAGGTTTGGCCAAAACCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CAA 90 bp AACTGCGCAGCAGGAAGGGCACTTCTGAAAGCACAGTGGAGAGATCGCTGGAGCGAGCAAATTACACCCTaGTTTACACACAGCTTCCTT +
Preference number: 5 (lower is better)
Translates to: NCAAGRALLKAQWRDRWSEQITP*FTHSFL
Trigger: AAGGAAGCTGTGTGTAAACAAGGGTGTAATTTGCTC...GCTCCAGCGATCTCTCCACTGTGCTTTCAGAAGTGCCCTTCCTGCTGCGCAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CAA 90 bp TTTCATACAGCGAGTGCCACGCACGGAAACTTTACAAAAATAGCAACTATCCGATGGTCAGGCTCGGCGTaGATGCACGTGCCTCCGTTG +
Preference number: 5 (lower is better)
Translates to: FHTASATHGNFTKIATIRWSGSA*MHVPPL
Trigger: CAACGGAGGCACGTGCATCAACGCCGAGCCTGACCA...TCGGATAGTTGCTATTTTTGTAAAGTTTCCGTGCGTGGCACTCGCTGTATGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CAA 90 bp TTTCATACAGCGAGTGCCACGCACGGAAACTTTACAAAAATAGCAACTATCCGATGGCACTCGTCGATGTaGATGCGGCAGTCAGGCCCC +
Preference number: 5 (lower is better)
Translates to: FHTASATHGNFTKIATIRWHSSM*MRQSGP
Trigger: GGGGCCTGACTGCCGCATCAACATCGACGAGTGCCA...TCGGATAGTTGCTATTTTTGTAAAGTTTCCGTGCGTGGCACTCGCTGTATGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CAA 90 bp TTTCATACAGCGAGTGCCACGCACGGAAACTTTACAAAAATAGCAACTATCCGAAGGCGGGCACAGTTATaGTCCAGGTGGCCGGAGCGT +
Preference number: 5 (lower is better)
Translates to: FHTASATHGNFTKIATIRRRAQL*SRWPER
Trigger: ACGCTCCGGCCACCTGGACAATAACTGTGCCCGCCT...TCGGATAGTTGCTATTTTTGTAAAGTTTCCGTGCGTGGCACTCGCTGTATGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CAA 90 bp ACCTCACTCTCAATACAAAAGGGACAGCACCGAAAGAACAAGGGAGGCCGGAATAACAAACGCTACGATTaGGTGACGACGCAGACACCC +
Preference number: 5 (lower is better)
Translates to: TSLSIQKGQHRKNKGGRNNKRYD*VTTQTP
Trigger: GGGTGTCTGCGTCGTCACCAAATCGTAGCGTTTGTT...ATTCCGGCCTCCCTTGTTCTTTCGGTGCTGTCCCTTTTGTATTGAGAGTGAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CAA 90 bp AACTGCGCAGCAGGAAGGGCACTTCTGAAAGCACAGTGGAGAGATCGCTGGAGCCATTCATTTATTCATTaGTTCTGCCTGTGCAAGGCA +
Preference number: 5 (lower is better)
Translates to: NCAAGRALLKAQWRDRWSHSFIH*FCLCKA
Trigger: TGCCTTGCACAGGCAGAACAAATGAATAAATGAATG...GCTCCAGCGATCTCTCCACTGTGCTTTCAGAAGTGCCCTTCCTGCTGCGCAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS-3UTR CAA 90 bp TTTCATACAGCGAGTGCCACGCACGGAAACTTTACAAAAATAGCAACTATCCGATCGCAGCGGAACCAGTaGACGCCGTCAACACAGATG +
Preference number: 5 (lower is better)
Translates to: FHTASATHGNFTKIATIRSQRNQ*TPSTQM
Trigger: CATCTGTGTTGACGGCGTCAACTGGTTCCGCTGCGA...TCGGATAGTTGCTATTTTTGTAAAGTTTCCGTGCGTGGCACTCGCTGTATGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS TCA 72 bp GATGCTCCTGACCGCGCGGTTGTCCACTTTGGGGCCTaGGGCCCAGTGGGCCGGCCTCCCCGGCGAGCGGCC +
Preference number: 6 (lower is better)
Translates to: DAPDRAVVHFGA*GPVGRPPRRAA
Trigger: GGCCGCTCGCCGGGGAGGCCGGCCCACTGGGCCTCAGGCCCCAAAGTGGACAACCGCGCGGTCAGGAGCATC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331782.8
ENST00000347004.2
ENST00000546616.1
CDS GCA 72 bp AGCGTCCATGGGGGCCACACACGCCGGAGGCTGCTGTaGCAGGCATCCCAGGCCCCGCGTCTGACCCGCAGC +
Preference number: 6 (lower is better)
Translates to: SVHGGHTRRRLL*QASQAPRLTRS
Trigger: GCTGCGGGTCAGACGCGGGGCCTGGGATGCCTGGCACAGCAGCCTCCGGCGTGTGTGGCCCCCATGGACGCT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS CCA 72 bp GGGGCCTTCTCCAGGCACCTTTGCCCCAGTGGGCACTaGGCGCTCAGGGCCTCGGGCTGGCCGGCCAGCAGA +
Preference number: 6 (lower is better)
Translates to: GAFSRHLCPSGH*ALRASGWPASR
Trigger: TCTGCTGGCCGGCCAGCCCGAGGCCCTGAGCGCCCAGTGCCCACTGGGGCAAAGGTGCCTGGAGAAGGCCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331782.8
ENST00000347004.2
ENST00000546616.1
CDS CAA 90 bp ACAGGGTGGTCGCAGACACTGGCCTGGGGCCTTCTCCAGGCACCTTaGCCCCAGTGGGCACTGGGCGCTCAGGGCCTCGGGCTGGCCGGC +
Preference number: 6 (lower is better)
Translates to: TGWSQTLAWGLLQAP*PQWALGAQGLGLAG
Trigger: GCCGGCCAGCCCGAGGCCCTGAGCGCCCAGTGCCCACTGGGGCAAAGGTGCCTGGAGAAGGCCCCAGGCCAGTGTCTGCGACCACCCTGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331782.8
ENST00000347004.2
ENST00000546616.1
CDS GCA 72 bp AACAGCCCTGCGGCCACAGAGGAGCCCACGTCAGGCTaGACGCTCCAACCCCCACAGCTCCCTGGGCCCCGG +
Preference number: 6 (lower is better)
Translates to: NSPAATEEPTSG*TLQPPQLPGPR
Trigger: CCGGGGCCCAGGGAGCTGTGGGGGTTGGAGCGTGCAGCCTGACGTGGGCTCCTCTGTGGCCGCAGGGCTGTT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553244.1
CDS CCA 72 bp CTGTTCCCCCGCTGGGTGATGGCGGCCACGATGGCGTaGGCCGCGCCCTGGATCAGGCTGCTGTCAGGCAGG +
Preference number: 6 (lower is better)
Translates to: LFPRWVMAATMA*AAPWIRLLSGR
Trigger: CCTGCCTGACAGCAGCCTGATCCAGGGCGCGGCCCACGCCATCGTGGCCGCCATCACCCAGCGGGGGAACAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331782.8
ENST00000347004.2
ENST00000546616.1
CDS CCA 72 bp ACCGCGCGGTTGTCCACTTTGGGGCCTGAGGCCCAGTaGGCCGGCCTCCCCGGCGAGCGGCCAGGATCTTTG +
Preference number: 6 (lower is better)
Translates to: TARLSTLGPEAQ*AGLPGERPGSL
Trigger: CAAAGATCCTGGCCGCTCGCCGGGGAGGCCGGCCCACTGGGCCTCAGGCCCCAAAGTGGACAACCGCGCGGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331782.8
ENST00000347004.2
ENST00000546616.1
CDS GCA 72 bp CGCCCGGTCGCAAAGCAACACCAGCAGGCGGTCCCGTaGCACAGCCCTTGTGGCTGGCAGGGAGCGGATCCC +
Preference number: 6 (lower is better)
Translates to: RPVAKQHQQAVP*HSPCGWQGADP
Trigger: GGGATCCGCTCCCTGCCAGCCACAAGGGCTGTGGCACGGGACCGCCTGCTGGTGTTGCTTTGCGACCGGGCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331782.8
ENST00000347004.2
ENST00000546616.1
CDS GCA 72 bp CCTCCCGCGGCAGCCGGCTCCTCTCCCGCTCTTTCCTaGGCTTGCGTGTCCACCACACGCACAGGACCACGC +
Preference number: 6 (lower is better)
Translates to: PPAAAGSSPALS*ACVSTTRTGPR
Trigger: GCGTGGTCCTGTGCGTGTGGTGGACACGCAAGCGCAGGAAAGAGCGGGAGAGGAGCCGGCTGCCGCGGGAGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331782.8
ENST00000347004.2
ENST00000546616.1
CDS CAA 72 bp CGCGGCAGCCGGCTCCTCTCCCGCTCTTTCCTGCGCTaGCGTGTCCACCACACGCACAGGACCACGCACGCC +
Preference number: 6 (lower is better)
Translates to: RGSRLLSRSFLR*RVHHTHRTTHA
Trigger: GGCGTGCGTGGTCCTGTGCGTGTGGTGGACACGCAAGCGCAGGAAAGAGCGGGAGAGGAGCCGGCTGCCGCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331782.8
ENST00000347004.2
ENST00000546616.1
CDS CAA 90 bp CTCTCCTCCCGCGGCAGCCGGCTCCTCTCCCGCTCTTTCCTGCGCTaGCGTGTCCACCACACGCACAGGACCACGCACGCCAGCCACAGC +
Preference number: 6 (lower is better)
Translates to: LSSRGSRLLSRSFLR*RVHHTHRTTHASHS
Trigger: GCTGTGGCTGGCGTGCGTGGTCCTGTGCGTGTGGTGGACACGCAAGCGCAGGAAAGAGCGGGAGAGGAGCCGGCTGCCGCGGGAGGAGAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331782.8
ENST00000347004.2
ENST00000546616.1
CDS GCA 72 bp GCGGCAGCCGGCTCCTCTCCCGCTCTTTCCTGCGCTTaGGTGTCCACCACACGCACAGGACCACGCACGCCA +
Preference number: 6 (lower is better)
Translates to: AAAGSSPALSCA*VSTTRTGPRTP
Trigger: TGGCGTGCGTGGTCCTGTGCGTGTGGTGGACACGCAAGCGCAGGAAAGAGCGGGAGAGGAGCCGGCTGCCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331782.8
ENST00000347004.2
ENST00000546616.1
CDS TCA 72 bp CAGGGCAGGTGCAGCGGTACTGGTCAGGCTCGGCGTTaGTGCACGTGCCTCCGTTGGTGCAGGGGTGGTGGC +
Preference number: 6 (lower is better)
Translates to: QGRCSGTGQARR*CTCLRWCRGGG
Trigger: GCCACCACCCCTGCACCAACGGAGGCACGTGCATCAACGCCGAGCCTGACCAGTACCGCTGCACCTGCCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331782.8
ENST00000347004.2
ENST00000553051.1
CDS GCA 72 bp GGGCTGCTGGCACACTCGTCTCGTTCCAGCTCGCAATaGCGGCCTCCGAAGCCCCGTGGGCACACACACTGG +
Preference number: 6 (lower is better)
Translates to: GLLAHSSRSSSQ*RPPKPRGHTHW
Trigger: CCAGTGTGTGTGCCCACGGGGCTTCGGAGGCCGGCATTGCGAGCTGGAACGAGACGAGTGTGCCAGCAGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS CCA 72 bp CGAAGCCGGACGGCACCTCATGGCAAGAGCCCCCGTTaGCACACGGGTTGGAGGTGCAGGCGTGCTCAGCCT +
Preference number: 6 (lower is better)
Translates to: RSRTAPHGKSPR*HTGWRCRRAQP
Trigger: AGGCTGAGCACGCCTGCACCTCCAACCCGTGTGCCAACGGGGGCTCTTGCCATGAGGTGCCGTCCGGCTTCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331782.8
ENST00000347004.2
ENST00000553051.1
CDS CCA 72 bp AGGGCACAGGTGGGCCCGCTCCAGCCCGATGGGCAGTaGCATTCGAAGCCGGACGGCACCTCATGGCAAGAG +
Preference number: 6 (lower is better)
Translates to: RAQVGPLQPDGQ*HSKPDGTSWQE
Trigger: CTCTTGCCATGAGGTGCCGTCCGGCTTCGAATGCCACTGCCCATCGGGCTGGAGCGGGCCCACCTGTGCCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS CAA 72 bp TCGAAGCCGGACGGCACCTCATGGCAAGAGCCCCCGTaGGCACACGGGTTGGAGGTGCAGGCGTGCTCAGCC +
Preference number: 6 (lower is better)
Translates to: SKPDGTSWQEPP*AHGLEVQACSA
Trigger: GGCTGAGCACGCCTGCACCTCCAACCCGTGTGCCAACGGGGGCTCTTGCCATGAGGTGCCGTCCGGCTTCGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331782.8
ENST00000347004.2
ENST00000553051.1
CDS GCA 72 bp TTCTCGTCGCAGCGCACGCGGATCTGCAGCTCCAGGTaGGCCACGTGGCCGCTGAAGTGCAGGCTCTTCCAG +
Preference number: 6 (lower is better)
Translates to: FSSQRTRICSSR*ATWPLKCRLFQ
Trigger: CTGGAAGAGCCTGCACTTCAGCGGCCACGTGGCGCACCTGGAGCTGCAGATCCGCGTGCGCTGCGACGAGAA
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331782.8
ENST00000347004.2
ENST00000553051.1
CDS GCA 72 bp TCATTGGCGTCCAGCTGGCAGGTGGCCCCCACCCACTaGTCGGGGCAGATGCACTCAAAGCCGTCCACCTGG +
Preference number: 6 (lower is better)
Translates to: SLASSWQVAPTH*SGQMHSKPSTW
Trigger: CCAGGTGGACGGCTTTGAGTGCATCTGCCCCGAGCAGTGGGTGGGGGCCACCTGCCAGCTGGACGCCAATGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331782.8
CDS GCA 72 bp TCGTTGACGTCCAGCTGGCAGGTGGCCCCCACCCACTaGTCGGGGCAGATGCACTCAAAGCCGTCCACCTGG +
Preference number: 6 (lower is better)
Translates to: SLTSSWQVAPTH*SGQMHSKPSTW
Trigger: CCAGGTGGACGGCTTTGAGTGCATCTGCCCCGAGCAGTGGGTGGGGGCCACCTGCCAGCTGGACGTCAACGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000347004.2
CDS GCA 72 bp TCGTCGATGTCTGCAGGGAGAGCCACCGCTGCTCAGTaGAGTGAGGCCAACGCCCACCGCAGGACCGGCATG +
Preference number: 6 (lower is better)
Translates to: SSMSAGRATAAQ*SEANAHRRTGM
Trigger: CATGCCGGTCCTGCGGTGGGCGTTGGCCTCACTGCACTGAGCAGCGGTGGCTCTCCCTGCAGACATCGACGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546616.1
CDS CCA 72 bp GATGTCAAGGGCACAGGTGGGCCCGCTCCAGCCCGATaGGCAGTGGCATTCGAAGCCGGACGGCACCTCATG +
Preference number: 6 (lower is better)
Translates to: DVKGTGGPAPAR*AVAFEAGRHLM
Trigger: CATGAGGTGCCGTCCGGCTTCGAATGCCACTGCCCATCGGGCTGGAGCGGGCCCACCTGTGCCCTTGACATC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS CCA 72 bp CACTGCTCGGGGCAGATGCACTCAAAGCCGTCCACCTaGTCCACACAGGTGCCACCGGCCGCACACGGGTTC +
Preference number: 6 (lower is better)
Translates to: HCSGQMHSKPST*STQVPPAAHGF
Trigger: GAACCCGTGTGCGGCCGGTGGCACCTGTGTGGACCAGGTGGACGGCTTTGAGTGCATCTGCCCCGAGCAGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS CCA 72 bp GATCACTTCCTGGCACCGGGGGCCGGCTCGGCCGGGTaGGCAGCTACAGCGATACCCGTTGATCTCATCCAC +
Preference number: 6 (lower is better)
Translates to: DHFLAPGAGSAG*AATAIPVDLIH
Trigger: GTGGATGAGATCAACGGGTATCGCTGTAGCTGCCCACCCGGCCGAGCCGGCCCCCGGTGCCAGGAAGTGATC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331782.8
ENST00000347004.2
ENST00000546616.1
CDS CAA 72 bp TCAGGGCAGGTGCAGCGGTACTGGTCAGGCTCGGCGTaGATGCACGTGCCTCCGTTGGTGCAGGGGTGGTGG +
Preference number: 6 (lower is better)
Translates to: SGQVQRYWSGSA*MHVPPLVQGWW
Trigger: CCACCACCCCTGCACCAACGGAGGCACGTGCATCAACGCCGAGCCTGACCAGTACCGCTGCACCTGCCCTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331782.8
ENST00000347004.2
ENST00000553051.1
CDS CAA 90 bp CACACCTTGCTGCAGTCACGGCGGCCATCCAGGCAGCGGCAGCTGTaGCAGTCTTCCACCCAGGAGCTTCCGTGTGGGAACGGAGTGCCC +
Preference number: 6 (lower is better)
Translates to: HTLLQSRRPSRQRQL*QSSTQELPCGNGVP
Trigger: GGGCACTCCGTTCCCACACGGAAGCTCCTGGGTGGAAGACTGCAACAGCTGCCGCTGCCTGGATGGCCGCCGTGACTGCAGCAAGGTGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331782.8
ENST00000347004.2
ENST00000546616.1
CDS CAA 90 bp GGCACGTGGTCACGGTTGAAATGCAAGGTGAGGCGGGCACAGTTATaGTCCAGGTGGCCGGAGCGTGGCAGGCAGGGGGTGCTCGGTGGC +
Preference number: 6 (lower is better)
Translates to: GTWSRLKCKVRRAQL*SRWPERGRQGVLGG
Trigger: GCCACCGAGCACCCCCTGCCTGCCACGCTCCGGCCACCTGGACAATAACTGTGCCCGCCTCACCTTGCATTTCAACCGTGACCACGTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331782.8
ENST00000347004.2
ENST00000546616.1
CDS TCA 72 bp CGTCTCCACCTTGACCTCGGTGACAGCCAGGAGCAGTaGGCTGTTCCCCCGCTGGGTGATGGCGGCCACGAT +
Preference number: 6 (lower is better)
Translates to: RLHLDLGDSQEQ*AVPPLGDGGHD
Trigger: ATCGTGGCCGCCATCACCCAGCGGGGGAACAGCTCACTGCTCCTGGCTGTCACCGAGGTCAAGGTGGAGACG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331782.8
ENST00000347004.2
ENST00000546616.1
CDS TCA 72 bp GGGCCGGCCTCCCCGGCGAGCGGCCAGGATCTTTGGTaGATTTGTGTGAGAGGAACTTCTCCGCCTCCAGGG +
Preference number: 6 (lower is better)
Translates to: GPASPASGQDLW*ICVRGTSPPPG
Trigger: CCCTGGAGGCGGAGAAGTTCCTCTCACACAAATTCACCAAAGATCCTGGCCGCTCGCCGGGGAGGCCGGCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331782.8
ENST00000347004.2
ENST00000546616.1
CDS TCA 72 bp CTCCCGGCACCGCAGCCAACAAGTTCGGAACGAGACTaGCAGCTCGCTCGCCCATTCGTCACCCGCGCACCT +
Preference number: 6 (lower is better)
Translates to: LPAPQPTSSERD*QLARPFVTRAP
Trigger: AGGTGCGCGGGTGACGAATGGGCGAGCGAGCTGTCAGTCTCGTTCCGAACTTGTTGGCTGCGGTGCCGGGAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000347004.2
CDS GCA 72 bp TGCAGTCACGGCGGCCATCCAGGCAGCGGCAGCTGTTaGAGTCTTCCACCCAGGAGCTTCCGTGTGGGAACG +
Preference number: 6 (lower is better)
Translates to: CSHGGHPGSGSC*SLPPRSFRVGT
Trigger: CGTTCCCACACGGAAGCTCCTGGGTGGAAGACTGCAACAGCTGCCGCTGCCTGGATGGCCGCCGTGACTGCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331782.8
ENST00000347004.2
ENST00000546616.1
CDS GCA 72 bp CAGTCCCAGGCCTCCACGATGAGGGTAAAGGAGCGCTaGAGACATGGGGAGGCGGGTCAGGTACCTGAGGCC +
Preference number: 6 (lower is better)
Translates to: QSQASTMRVKER*RHGEAGQVPEA
Trigger: GGCCTCAGGTACCTGACCCGCCTCCCCATGTCTGCAGCGCTCCTTTACCCTCATCGTGGAGGCCTGGGACTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553051.1
CDS GCA 72 bp CTCACTGATGCGGCAGTCAGGCCCCGCGAAGCCAGGTaGACACTCGCAGCGGAACCAGTTGACGCCGTCAAC +
Preference number: 6 (lower is better)
Translates to: LTDAAVRPREAR*TLAAEPVDAVN
Trigger: GTTGACGGCGTCAACTGGTTCCGCTGCGAGTGTGCACCTGGCTTCGCGGGGCCTGACTGCCGCATCAGTGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553244.1
CDS CCA 72 bp GATGGGCAGTGGCATTCGAAGCCGGACGGCACCTCATaGCAAGAGCCCCCGTTGGCACACGGGTTGGAGGTG +
Preference number: 6 (lower is better)
Translates to: DGQWHSKPDGTS*QEPPLAHGLEV
Trigger: CACCTCCAACCCGTGTGCCAACGGGGGCTCTTGCCATGAGGTGCCGTCCGGCTTCGAATGCCACTGCCCATC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331782.8
ENST00000347004.2
ENST00000553051.1
CDS CCA 72 bp GCAGCTGTTGCAGTCTTCCACCCAGGAGCTTCCGTGTaGGAACGGAGTGCCCCGGGACCAGCAGGATCTCCC +
Preference number: 6 (lower is better)
Translates to: AAVAVFHPGASV*ERSAPGPAGSP
Trigger: GGGAGATCCTGCTGGTCCCGGGGCACTCCGTTCCCACACGGAAGCTCCTGGGTGGAAGACTGCAACAGCTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331782.8
ENST00000347004.2
ENST00000546616.1
CDS CAA 72 bp CTGCAGTCACGGCGGCCATCCAGGCAGCGGCAGCTGTaGCAGTCTTCCACCCAGGAGCTTCCGTGTGGGAAC +
Preference number: 6 (lower is better)
Translates to: LQSRRPSRQRQL*QSSTQELPCGN
Trigger: GTTCCCACACGGAAGCTCCTGGGTGGAAGACTGCAACAGCTGCCGCTGCCTGGATGGCCGCCGTGACTGCAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331782.8
ENST00000347004.2
ENST00000546616.1
CDS CAA 90 bp CAGTGGCATTCGAAGCCGGACGGCACCTCATGGCAAGAGCCCCCGTaGGCACACGGGTTGGAGGTGCAGGCGTGCTCAGCCTTCTCACAG +
Preference number: 6 (lower is better)
Translates to: QWHSKPDGTSWQEPP*AHGLEVQACSAFSQ
Trigger: CTGTGAGAAGGCTGAGCACGCCTGCACCTCCAACCCGTGTGCCAACGGGGGCTCTTGCCATGAGGTGCCGTCCGGCTTCGAATGCCACTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331782.8
ENST00000347004.2
ENST00000553051.1
CDS CAA 90 bp CAGTGGGCCGGCCTCCCCGGCGAGCGGCCAGGATCTTTGGTGAATTaGTGTGAGAGGAACTTCTCCGCCTCCAGGGAGTCCTCCTCACCG +
Preference number: 6 (lower is better)
Translates to: QWAGLPGERPGSLVN*CERNFSASRESSSP
Trigger: CGGTGAGGAGGACTCCCTGGAGGCGGAGAAGTTCCTCTCACACAAATTCACCAAAGATCCTGGCCGCTCGCCGGGGAGGCCGGCCCACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331782.8
ENST00000347004.2
ENST00000546616.1
CDS TCA 72 bp GTTGTGGCCACACTGCCCTTCAAGGGACGTGGACGTTaGTGTCCCCAGACTCCTGACACCGCGGCTGGGCTG +
Preference number: 6 (lower is better)
Translates to: VVATLPFKGRGR*CPQTPDTAAGL
Trigger: CAGCCCAGCCGCGGTGTCAGGAGTCTGGGGACATCAACGTCCACGTCCCTTGAAGGGCAGTGTGGCCACAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553244.1
CDS GCA 72 bp CGCCAGGGCACGGCTCGCGGGGCACGGAGCAGTTCTTaGCACCAAAGTCATCAGGGCAGGCGCAGTAATAGT +
Preference number: 6 (lower is better)
Translates to: RQGTARGARSSS*HQSHQGRRSNS
Trigger: ACTATTACTGCGCCTGCCCTGATGACTTTGGTGGCAAGAACTGCTCCGTGCCCCGCGAGCCGTGCCCTGGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS GCA 72 bp GATGTTGATGCGGCAGTCAGGCCCCGCGAAGCCAGGTaGACACTCGCAGCGGAACCAGTTGACGCCGTCAAC +
Preference number: 6 (lower is better)
Translates to: DVDAAVRPREAR*TLAAEPVDAVN
Trigger: GTTGACGGCGTCAACTGGTTCCGCTGCGAGTGTGCACCTGGCTTCGCGGGGCCTGACTGCCGCATCAACATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS GCA 72 bp AGTCTTCCACCCAGGAGCTTCCGTGTGGGAACGGAGTaGCCCGGGACCAGCAGGATCTCCCGAACCCGATCA +
Preference number: 6 (lower is better)
Translates to: SLPPRSFRVGTE*PGTSRISRTRS
Trigger: TGATCGGGTTCGGGAGATCCTGCTGGTCCCGGGGCACTCCGTTCCCACACGGAAGCTCCTGGGTGGAAGACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331782.8
ENST00000347004.2
ENST00000546616.1
CDS CAA 72 bp GCGCCCACCGTGGTGCCCTGGGGCACGTGGTCACGGTaGAAATGCAAGGTGAGGCGGGCACAGTTATTGTCC +
Preference number: 6 (lower is better)
Translates to: APTVVPWGTWSR*KCKVRRAQLLS
Trigger: GGACAATAACTGTGCCCGCCTCACCTTGCATTTCAACCGTGACCACGTGCCCCAGGGCACCACGGTGGGCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331782.8
ENST00000347004.2
ENST00000546616.1
CDS CAA 72 bp CAGTGGGCCGGCCTCCCCGGCGAGCGGCCAGGATCTTaGGTGAATTTGTGTGAGAGGAACTTCTCCGCCTCC +
Preference number: 6 (lower is better)
Translates to: QWAGLPGERPGS*VNLCERNFSAS
Trigger: GGAGGCGGAGAAGTTCCTCTCACACAAATTCACCAAAGATCCTGGCCGCTCGCCGGGGAGGCCGGCCCACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331782.8
ENST00000347004.2
ENST00000546616.1
CDS GCA 72 bp CTCTTCCAGCGGTCCTCCGGGTTGATCATGCCGGCATaGGACACTCGCTCGATCAGCAGCTCCTCATTCGGG +
Preference number: 6 (lower is better)
Translates to: LFQRSSGLIMPA*DTRSISSSSFG
Trigger: CCCGAATGAGGAGCTGCTGATCGAGCGAGTGTCGCATGCCGGCATGATCAACCCGGAGGACCGCTGGAAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331782.8
ENST00000347004.2
ENST00000553051.1
CDS GCA 72 bp AGGTGTCGCCGCTGTCGTAGCAGGTGCCACCGTTGCTaGAGGTGTAGGCATCGCACTGGAACTCGCGTGAGT +
Preference number: 6 (lower is better)
Translates to: RCRRCRSRCHRC*RCRHRTGTRVS
Trigger: ACTCACGCGAGTTCCAGTGCGATGCCTACACCTGCAGCAACGGTGGCACCTGCTACGACAGCGGCGACACCT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331782.8
ENST00000347004.2
ENST00000553244.1
CDS CAA 72 bp TCACGGTTGAAATGCAAGGTGAGGCGGGCACAGTTATaGTCCAGGTGGCCGGAGCGTGGCAGGCAGGGGGTG +
Preference number: 6 (lower is better)
Translates to: SRLKCKVRRAQL*SRWPERGRQGV
Trigger: CACCCCCTGCCTGCCACGCTCCGGCCACCTGGACAATAACTGTGCCCGCCTCACCTTGCATTTCAACCGTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331782.8
ENST00000347004.2
ENST00000546616.1
CDS CAA 72 bp GGCCTCCCCGGCGAGCGGCCAGGATCTTTGGTGAATTaGTGTGAGAGGAACTTCTCCGCCTCCAGGGAGTCC +
Preference number: 6 (lower is better)
Translates to: GLPGERPGSLVN*CERNFSASRES
Trigger: GGACTCCCTGGAGGCGGAGAAGTTCCTCTCACACAAATTCACCAAAGATCCTGGCCGCTCGCCGGGGAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331782.8
ENST00000347004.2
ENST00000546616.1
CDS TCA 72 bp CCCCGGCGAGCGGCCAGGATCTTTGGTGAATTTGTGTaGGAGGAACTTCTCCGCCTCCAGGGAGTCCTCCTC +
Preference number: 6 (lower is better)
Translates to: PRRAARIFGEFV*EELLRLQGVLL
Trigger: GAGGAGGACTCCCTGGAGGCGGAGAAGTTCCTCTCACACAAATTCACCAAAGATCCTGGCCGCTCGCCGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331782.8
ENST00000347004.2
ENST00000546616.1
CDS TCA 72 bp CCGCGAAGCCAGGTGCACACTCGCAGCGGAACCAGTTaGCGCCGTCAACACAGATGCCACCATTGTAGCTGC +
Preference number: 6 (lower is better)
Translates to: PRSQVHTRSGTS*RRQHRCHHCSC
Trigger: GCAGCTACAATGGTGGCATCTGTGTTGACGGCGTCAACTGGTTCCGCTGCGAGTGTGCACCTGGCTTCGCGG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553244.1
CDS CCA 72 bp CAGGTTATAGCAGCGAGCGCCGTTCCGGCAGGGGCTTaGCTCACAAAGGTCGACATCCACCTCACAGAGAGG +
Preference number: 6 (lower is better)
Translates to: QVIAASAVPAGA*LTKVDIHLTER
Trigger: CCTCTCTGTGAGGTGGATGTCGACCTTTGTGAGCCAAGCCCCTGCCGGAACGGCGCTCGCTGCTATAACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS TCA 72 bp CCGCGAAGCCAGGTGCACACTCGCAGCGGAACCAGTTaGCGCCGTCAACACAGATGCCACCATTGTAGCAAG +
Preference number: 6 (lower is better)
Translates to: PRSQVHTRSGTS*RRQHRCHHCSK
Trigger: CTTGCTACAATGGTGGCATCTGTGTTGACGGCGTCAACTGGTTCCGCTGCGAGTGTGCACCTGGCTTCGCGG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331782.8
ENST00000347004.2
CDS GCA 72 bp GGCCGAAAAAGTCGTTGCGGGGCCGGCAGAACTTGTTaGAAGTGGCGCTGTAGTAGTTCTCGTCGCAGCGCA +
Preference number: 6 (lower is better)
Translates to: GRKSRCGAGRTC*KWRCSSSRRSA
Trigger: TGCGCTGCGACGAGAACTACTACAGCGCCACTTGCAACAAGTTCTGCCGGCCCCGCAACGACTTTTTCGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331782.8
ENST00000347004.2
ENST00000553051.1
CDS GCA 72 bp GTGGCCCCCAGGGTGCCACTCACCAAGGCAGAGGGTTaGAGTCGTTGGTATTGTGAGTGCAAGTACGACCCT +
Preference number: 6 (lower is better)
Translates to: VAPRVPLTKAEG*SRWYCECKYDP
Trigger: AGGGTCGTACTTGCACTCACAATACCAACGACTGCAACCCTCTGCCTTGGTGAGTGGCACCCTGGGGGCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553244.1
CDS GCA 72 bp TACACCCTTGTTTACACACAGCTTCCTTGCACTCCTTaGCCATCCAGCCGTCCATGCAGGCCTTGTTGCCGT +
Preference number: 6 (lower is better)
Translates to: YTLVYTQLPCTP*PSSRPCRPCCR
Trigger: ACGGCAACAAGGCCTGCATGGACGGCTGGATGGGCAAGGAGTGCAAGGAAGCTGTGTGTAAACAAGGGTGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331782.8
ENST00000347004.2
ENST00000553051.1
CDS CCA 72 bp GCCAATCAGGTTTTTGCAAGAAAAAGCGTTAAGGCATaGCTTCCCTTCACACTCATTGGCGTCCAGCTGGCA +
Preference number: 6 (lower is better)
Translates to: ANQVFARKSVKA*LPFTLIGVQLA
Trigger: TGCCAGCTGGACGCCAATGAGTGTGAAGGGAAGCCATGCCTTAACGCTTTTTCTTGCAAAAACCTGATTGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000331782.8