RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for JAG1 (Homo sapiens)

Ensembl gene IDs: ENSG00000101384

Ensembl transcript IDs: ENST00000254958.10, ENST00000423891.6, ENST00000488480.2, ENST00000612857.1, ENST00000613518.1, ENST00000617357.1, ENST00000617965.2, ENST00000620743.1, ENST00000622545.1

Found 470 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGTGGGAGCTCAAAGACCAGGGGGCTGGGCAGGCTCCTGGGAGCCTaGTCCGAGACCGTGTCGGCTGCAAGGGGACACACAACCAGGGTA +
Preference number: 1 (lower is better)
Translates to: SGSSKTRGLGRLLGA*SETVSAARGHTTRV
Trigger: TACCCTGGTTGTGTGTCCCCTTGCAGCCGACACGGTCTCGGATCAGGCTCCCAGGAGCCTGCCCAGCCCCCTGGTCTTTGAGCTCCCACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000254958.10
3UTR CCA 90 bp CCATTAGGACATCTGGCAGAAGTGGGAGCTCAAAGACCAGGGGGCTaGGCAGGCTCCTGGGAGCCTGATCCGAGACCGTGTCGGCTGCAA +
Preference number: 1 (lower is better)
Translates to: PLGHLAEVGAQRPGG*AGSWEPDPRPCRLQ
Trigger: TTGCAGCCGACACGGTCTCGGATCAGGCTCCCAGGAGCCTGCCCAGCCCCCTGGTCTTTGAGCTCCCACTTCTGCCAGATGTCCTAATGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000254958.10
3UTR TCA 90 bp CCGAGACCGTGTCGGCTGCAAGGGGACACACAACCAGGGTACTGTTaGCTAGCTTTTTGCATAGCTGTGAGATGCGGCACTCGATTTCCC +
Preference number: 1 (lower is better)
Translates to: PRPCRLQGDTQPGYC*LAFCIAVRCGTRFP
Trigger: GGGAAATCGAGTGCCGCATCTCACAGCTATGCAAAAAGCTAGTCAACAGTACCCTGGTTGTGTGTCCCCTTGCAGCCGACACGGTCTCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000254958.10
3UTR TCA 90 bp TCCTCACTTAAGGCAGGCAGTGTACTCTATGGCAAATCTAAACAGTaGTCTTACTGGACATTTTATGGTTCAAGTATTCAACTAGCTTAT +
Preference number: 1 (lower is better)
Translates to: SSLKAGSVLYGKSKQ*SYWTFYGSSIQLAY
Trigger: ATAAGCTAGTTGAATACTTGAACCATAAAATGTCCAGTAAGATCACTGTTTAGATTTGCCATAGAGTACACTGCCTGCCTTAAGTGAGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254958.10
3UTR-3UTR CCA 90 bp CAGAAGCACATGGCAAAGCCGGTAGAACTACGTAAGCTCAGAAGAGGCCACACTGGCTGGGCAGGCTCCTaGGAGCCTGATCCGAGACCG +
Preference number: 2 (lower is better)
Translates to: QKHMAKPVELRKLRRGHTGWAGS*EPDPRP
Trigger: CGGTCTCGGATCAGGCTCCCAGGAGCCTGCCCAGCC...AGTGTGGCCTCTTCTGAGCTTACGTAGTTCTACCGGCTTTGCCATGTGCTTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254958.10
3UTR-3UTR TCA 90 bp CCATCCCTCTGTCAGGCAGAGCCTATTATACCCCGATTACCAGAACAGACTCAGAGGCTCCTGGGAGCCTaGTCCGAGACCGTGTCGGCT +
Preference number: 2 (lower is better)
Translates to: PSLCQAEPIIPRLPEQTQRLLGA*SETVSA
Trigger: AGCCGACACGGTCTCGGATCAGGCTCCCAGGAGCCT...CTGAGTCTGTTCTGGTAATCGGGGTATAATAGGCTCTGCCTGACAGAGGGATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254958.10
3UTR-3UTR GCA 90 bp CAGCTGTCAATCACTTCACAGGGGGTCGTGCGGCAGTGGTCTTTCAGGTGTGAGAGTCCTCGGGGCACTTaGAGAAATAGTCACTGGCAC +
Preference number: 2 (lower is better)
Translates to: QLSITSQGVVRQWSFRCESPRGT*RNSHWH
Trigger: GTGCCAGTGACTATTTCTGCAAGTGCCCCGAGGACT...CTCACACCTGAAAGACCACTGCCGCACGACCCCCTGTGAAGTGATTGACAGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622545.1
3UTR-3UTR CCA 90 bp CCGCACCCCTTCAGGTGTGTCGTTGGAAGCCATGGCCACTGTGCAGCTGTCAATTGCAGAAATAGTCACTaGCACGGTTGTAGCACTGGG +
Preference number: 2 (lower is better)
Translates to: PHPFRCVVGSHGHCAAVNCRNSH*HGCSTG
Trigger: CCCAGTGCTACAACCGTGCCAGTGACTATTTCTGCA...ATTGACAGCTGCACAGTGGCCATGGCTTCCAACGACACACCTGAAGGGGTGCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622545.1
3UTR-3UTR CCA 90 bp CTTGCCCTCATAGTCCTCGGGGCACTTGCAGAAATAGTCACTGGCACGGTTGTACACTGGGCACCGTTCTaGCAGGGATTAGGCTCACAA +
Preference number: 2 (lower is better)
Translates to: LALIVLGALAEIVTGTVVHWAPF*QGLGSQ
Trigger: TTGTGAGCCTAATCCCTGCCAGAACGGTGCCCAGTG...TACAACCGTGCCAGTGACTATTTCTGCAAGTGCCCCGAGGACTATGAGGGCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622545.1
3UTR CAA 90 bp TCGGCTGCAAGGGGACACACAACCAGGGTACTGTTGACTAGCTTTTaGCATAGCTGTGAGATGCGGCACTCGATTTCCCAGCCAACCACA +
Preference number: 2 (lower is better)
Translates to: SAARGHTTRVLLTSF*HSCEMRHSISQPTT
Trigger: TGTGGTTGGCTGGGAAATCGAGTGCCGCATCTCACAGCTATGCAAAAAGCTAGTCAACAGTACCCTGGTTGTGTGTCCCCTTGCAGCCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254958.10
3UTR-3UTR GCA 90 bp CTCTGTCAGGCAGAGCCTATTATACCCCGATTACCAGAACAGACTCAGCAGGGTTGCATAGCTGTGAGATaGGGCACTCGATTTCCCAGC +
Preference number: 2 (lower is better)
Translates to: LCQAEPIIPRLPEQTQQGCIAVR*GTRFPS
Trigger: GCTGGGAAATCGAGTGCCGCATCTCACAGCTATGCA...ACCCTGCTGAGTCTGTTCTGGTAATCGGGGTATAATAGGCTCTGCCTGACAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254958.10
3UTR-3UTR GCA 90 bp CTCTGTCAGGCAGAGCCTATTATACCCCGATTACCAGAACAGACTCAGCAGGGTGTTCCCTTACTGCTCTaGAGCAGATCACCTGCCTGT +
Preference number: 2 (lower is better)
Translates to: LCQAEPIIPRLPEQTQQGVPLLL*SRSPAC
Trigger: ACAGGCAGGTGATCTGCTGCAGAGCAGTAAGGGAAC...ACCCTGCTGAGTCTGTTCTGGTAATCGGGGTATAATAGGCTCTGCCTGACAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254958.10
3UTR-3UTR CCA 90 bp CCGCACCCCTTCAGGTGTGTCGTTGGAAGCCATGGCCACTGTGCAGCTGTCAATGTGGGACACAGACACTaGAATCTGTTGATTTCATTC +
Preference number: 2 (lower is better)
Translates to: PHPFRCVVGSHGHCAAVNVGHRH*NLLISF
Trigger: GAATGAAATCAACAGATTCCAGTGTCTGTGTCCCAC...ATTGACAGCTGCACAGTGGCCATGGCTTCCAACGACACACCTGAAGGGGTGCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622545.1
3UTR-3UTR TCA 90 bp CTCTGTCAGGCAGAGCCTATTATACCCCGATTACCAGAACAGACTCAGCAGGGTTTTACCAGCAACTGCTaGCATCAAAGTCTCCCCTCC +
Preference number: 2 (lower is better)
Translates to: LCQAEPIIPRLPEQTQQGFTSNC*HQSLPS
Trigger: GGAGGGGAGACTTTGATGTCAGCAGTTGCTGGTAAA...ACCCTGCTGAGTCTGTTCTGGTAATCGGGGTATAATAGGCTCTGCCTGACAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000254958.10
3UTR-3UTR TCA 90 bp CAGCTGTCAATCACTTCACAGGGGGTCGTGCGGCAGTGGTCTTTCAGGTGTGAGGACACTGGAATCTGTTaGTTTCATTCTGACAGTGAC +
Preference number: 2 (lower is better)
Translates to: QLSITSQGVVRQWSFRCEDTGIC*FHSDSD
Trigger: GTCACTGTCAGAATGAAATCAACAGATTCCAGTGTC...CTCACACCTGAAAGACCACTGCCGCACGACCCCCTGTGAAGTGATTGACAGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000622545.1
3UTR-3UTR GCA 90 bp CCTCTGTCAGGCAGAGCCTATTATACCCCGATTACCAGAACAGACTCAGCAGGGAACTTGTTCCCTTACTaGTCTGCAGCAGATCACCTG +
Preference number: 2 (lower is better)
Translates to: PLSGRAYYTPITRTDSAGNLFPY*SAADHL
Trigger: CAGGTGATCTGCTGCAGAGCAGTAAGGGAACAAGTT...CCCTGCTGAGTCTGTTCTGGTAATCGGGGTATAATAGGCTCTGCCTGACAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254958.10
3UTR-3UTR TCA 90 bp ATGCGGCACTCGATTTCCCAGCCAACCACAGAAACTACCATTGCCAGTGTAAGCCCTCAGACTCGAGTATaGCACGACAGTTTAAAGAAC +
Preference number: 2 (lower is better)
Translates to: MRHSISQPTTETTIASVSPQTRV*HDSLKN
Trigger: GTTCTTTAAACTGTCGTGTCATACTCGAGTCTGAGG...GCTTACACTGGCAATGGTAGTTTCTGTGGTTGGCTGGGAAATCGAGTGCCGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254958.10
3UTR-3UTR TCA 90 bp CAGAAGCACATGGCAAAGCCGGTAGAACTACGTAAGCTCAGAAGAGGCCACACTCAACCAGGGTACTGTTaGCTAGCTTTTTGCATAGCT +
Preference number: 2 (lower is better)
Translates to: QKHMAKPVELRKLRRGHTQPGYC*LAFCIA
Trigger: AGCTATGCAAAAAGCTAGTCAACAGTACCCTGGTTG...AGTGTGGCCTCTTCTGAGCTTACGTAGTTCTACCGGCTTTGCCATGTGCTTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000254958.10
3UTR-3UTR TCA 90 bp CAGAAGCACATGGCAAAGCCGGTAGAACTACGTAAGCTCAGAAGAGGCCACACTTCACGGTCTCAATGGTaGACCAACAAGATTACTCTG +
Preference number: 2 (lower is better)
Translates to: QKHMAKPVELRKLRRGHTSRSQW*TNKITL
Trigger: CAGAGTAATCTTGTTGGTTCACCATTGAGACCGTGA...AGTGTGGCCTCTTCTGAGCTTACGTAGTTCTACCGGCTTTGCCATGTGCTTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254958.10
3UTR-3UTR CCA 90 bp CTCTGTCAGGCAGAGCCTATTATACCCCGATTACCAGAACAGACTCAGCAGGGTATTCCATCAGTATTCTaGGCACAGAAGCCCATCCTA +
Preference number: 2 (lower is better)
Translates to: LCQAEPIIPRLPEQTQQGIPSVF*AQKPIL
Trigger: TAGGATGGGCTTCTGTGCCCAGAATACTGATGGAAT...ACCCTGCTGAGTCTGTTCTGGTAATCGGGGTATAATAGGCTCTGCCTGACAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254958.10
3UTR-3UTR TCA 90 bp CCTCTGTCAGGCAGAGCCTATTATACCCCGATTACCAGAACAGACTCAGCAGGGTTCGTAATAGCACTTTaGTTTCCTCACTTAAGGCAG +
Preference number: 2 (lower is better)
Translates to: PLSGRAYYTPITRTDSAGFVIAL*FPHLRQ
Trigger: CTGCCTTAAGTGAGGAAATCAAAGTGCTATTACGAA...CCCTGCTGAGTCTGTTCTGGTAATCGGGGTATAATAGGCTCTGCCTGACAGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254958.10
3UTR CAA 90 bp CCATTAATCCAGTGGTGTTTATTCAAGCAGTATTCACACTTGCTGTaGAATAACAAGGGAATCAAGGCTCCCCTAGATGGGGCTCCCGCA +
Preference number: 2 (lower is better)
Translates to: PLIQWCLFKQYSHLL*NNKGIKAPLDGAPA
Trigger: TGCGGGAGCCCCATCTAGGGGAGCCTTGATTCCCTTGTTATTCAACAGCAAGTGTGAATACTGCTTGAATAAACACCACTGGATTAATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254958.10
3UTR-3UTR GCA 90 bp TCAACCACTCACATTTTGGCTATGTTAAGTCATAGCTCAACTTGTTCCCTTACTCACAGAAACTACCATTaGCAGTGTAAGCCAGCTTGT +
Preference number: 2 (lower is better)
Translates to: STTHILAMLSHSSTCSLTHRNYH*QCKPAC
Trigger: ACAAGCTGGCTTACACTGGCAATGGTAGTTTCTGTG...AGTAAGGGAACAAGTTGAGCTATGACTTAACATAGCCAAAATGTGAGTGGTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254958.10
3UTR-3UTR GCA 90 bp TCAACCACTCACATTTTGGCTATGTTAAGTCATAGCTCAACTTGTTCCCTTACTGTCATTTGTGATCGTTaGTGTGGTTCTGAGCTGCAA +
Preference number: 2 (lower is better)
Translates to: STTHILAMLSHSSTCSLTVICDR*CGSELQ
Trigger: TTGCAGCTCAGAACCACAGCAACGATCACAAATGAC...AGTAAGGGAACAAGTTGAGCTATGACTTAACATAGCCAAAATGTGAGTGGTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254958.10
3UTR CAA 90 bp TGCTGTGGTTCTGAGCTGCAAAGGCACTTTCAAATACAGAACTACTaGTACGTCATCATAAAACCAATATACAAAAACAACTCAAGAGTC +
Preference number: 2 (lower is better)
Translates to: CCGSELQRHFQIQNY*YVIIKPIYKNNSRV
Trigger: GACTCTTGAGTTGTTTTTGTATATTGGTTTTATGATGACGTACAAGTAGTTCTGTATTTGAAAGTGCCTTTGCAGCTCAGAACCACAGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000254958.10
3UTR CAA 90 bp CTCTGTTTTATAAGCCTTTTTGATCTTGAACTTCGTAATAGCACTTaGATTTCCTCACTTAAGGCAGGCAGTGTACTCTATGGCAAATCT +
Preference number: 2 (lower is better)
Translates to: LCFISLFDLELRNST*ISSLKAGSVLYGKS
Trigger: AGATTTGCCATAGAGTACACTGCCTGCCTTAAGTGAGGAAATCAAAGTGCTATTACGAAGTTCAAGATCAAAAAGGCTTATAAAACAGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000254958.10
3UTR GCA 72 bp CCCCTTCAGGTGTGTCGTTGGAAGCCATGGCCACTGTaGAGCTGTCAATCACTTCACAGGGGGTCGTGCGGC +
Preference number: 3 (lower is better)
Translates to: PLQVCRWKPWPL*SCQSLHRGSCG
Trigger: GCCGCACGACCCCCTGTGAAGTGATTGACAGCTGCACAGTGGCCATGGCTTCCAACGACACACCTGAAGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622545.1
3UTR CCA 72 bp CCTCATAGTCCTCGGGGCACTTGCAGAAATAGTCACTaGCACGGTTGTAGCACTGGGCACCGTTCTGGCAGG +
Preference number: 3 (lower is better)
Translates to: PHSPRGTCRNSH*HGCSTGHRSGR
Trigger: CCTGCCAGAACGGTGCCCAGTGCTACAACCGTGCCAGTGACTATTTCTGCAAGTGCCCCGAGGACTATGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622545.1
3UTR GCA 72 bp CCACTGTGCAGCTGTCAATCACTTCACAGGGGGTCGTaGGGCAGTGGTCTTTCAGGTGTGAGCAGTTCTTGC +
Preference number: 3 (lower is better)
Translates to: PLCSCQSLHRGS*GSGLSGVSSSC
Trigger: GCAAGAACTGCTCACACCTGAAAGACCACTGCCGCACGACCCCCTGTGAAGTGATTGACAGCTGCACAGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000622545.1
3UTR GCA 72 bp TCGTGCGGCAGTGGTCTTTCAGGTGTGAGCAGTTCTTaGCCTCATAGTCCTCGGGGCACTTGCAGAAATAGT +
Preference number: 3 (lower is better)
Translates to: SCGSGLSGVSSS*PHSPRGTCRNS
Trigger: ACTATTTCTGCAAGTGCCCCGAGGACTATGAGGGCAAGAACTGCTCACACCTGAAAGACCACTGCCGCACGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622545.1
3UTR TCA 72 bp GGGATTCTAAGTCAGCAACGGCCTCAGACTCGAGTATaGCACGACAGTTTAAAGAACTACAAGCCCTCAGAC +
Preference number: 3 (lower is better)
Translates to: GILSQQRPQTRV*HDSLKNYKPSD
Trigger: GTCTGAGGGCTTGTAGTTCTTTAAACTGTCGTGTCATACTCGAGTCTGAGGCCGTTGCTGACTTAGAATCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254958.10
3UTR TCA 72 bp AAGGCAGGCAGTGTACTCTATGGCAAATCTAAACAGTaGTCTTACTGGACATTTTATGGTTCAAGTATTCAA +
Preference number: 3 (lower is better)
Translates to: KAGSVLYGKSKQ*SYWTFYGSSIQ
Trigger: TTGAATACTTGAACCATAAAATGTCCAGTAAGATCACTGTTTAGATTTGCCATAGAGTACACTGCCTGCCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254958.10
3UTR TCA 72 bp ATAGGACAATACAAAGTATCTTCACGGTCTCAATGGTaGACCAACAAGATTACTCTGTTTTATAAGCCTTTT +
Preference number: 3 (lower is better)
Translates to: IGQYKVSSRSQW*TNKITLFYKPF
Trigger: AAAAGGCTTATAAAACAGAGTAATCTTGTTGGTTCACCATTGAGACCGTGAAGATACTTTGTATTGTCCTAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR GCA 90 bp CCATCCCTCTGTCAGGCAGAGCCTATTATACCCCGATTACCAGAACAGACTCAGCGTCGCGGGTGCACTTaGGGTCTCCCGGGTTCCGGG +
Preference number: 4 (lower is better)
Translates to: PSLCQAEPIIPRLPEQTQRRGCT*GLPGSG
Trigger: CCCGGAACCCGGGAGACCGCAAGTGCACCCGCGACG...CTGAGTCTGTTCTGGTAATCGGGGTATAATAGGCTCTGCCTGACAGAGGGATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR GCA 90 bp TCAGGCAGAGCCTATTATACCCCGATTACCAGAACAGACTCAGCAGGGTGGCAGGCAGCACGATGCGGTTaGGGTCGTTGCCGCGGCTGG +
Preference number: 4 (lower is better)
Translates to: SGRAYYTPITRTDSAGWQAARCG*GRCRGW
Trigger: CCAGCCGCGGCAACGACCGCAACCGCATCGTGCTGC...CTGCCACCCTGCTGAGTCTGTTCTGGTAATCGGGGTATAATAGGCTCTGCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR CCA 90 bp ATGCGGCACTCGATTTCCCAGCCAACCACAGAAACTACCATTGCCAGTGTAAGCCGCTGCTGTTCGCGCTaGTGCTGCCGCCGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: MRHSISQPTTETTIASVSRCCSR*CCRRCC
Trigger: GCAGCACCGGCGGCAGCACCAGCGCGAACAGCAGCG...GCTTACACTGGCAATGGTAGTTTCTGTGGTTGGCTGGGAAATCGAGTGCCGCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR GCA 90 bp TCAGGCAGAGCCTATTATACCCCGATTACCAGAACAGACTCAGCAGGGTGGCAGCACACTCGTCGCGGGTaGACTTGCGGTCTCCCGGGT +
Preference number: 4 (lower is better)
Translates to: SGRAYYTPITRTDSAGWQHTRRG*TCGLPG
Trigger: ACCCGGGAGACCGCAAGTGCACCCGCGACGAGTGTG...CTGCCACCCTGCTGAGTCTGTTCTGGTAATCGGGGTATAATAGGCTCTGCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR GCA 90 bp CCTCTGTCAGGCAGAGCCTATTATACCCCGATTACCAGAACAGACTCAGCAGGGCTGAGTGTGTGTGGCTaGCCGGCTTCCGCCGCTTCC +
Preference number: 4 (lower is better)
Translates to: PLSGRAYYTPITRTDSAGLSVCG*PASAAS
Trigger: GGAAGCGGCGGAAGCCGGGCAGCCACACACACTCAG...CCCTGCTGAGTCTGTTCTGGTAATCGGGGTATAATAGGCTCTGCCTGACAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR CCA 90 bp TGCAGCTGTCAATCACTTCACAGGGGGTCGTGCGGCAGTGGTCTTTCAGGTGTGGGGGTCGTGCGGCAGTaGTCTTTCAGGTGTGAGCAG +
Preference number: 4 (lower is better)
Translates to: CSCQSLHRGSCGSGLSGVGVVRQ*SFRCEQ
Trigger: CTGCTCACACCTGAAAGACCACTGCCGCACGACCCC...CACACCTGAAAGACCACTGCCGCACGACCCCCTGTGAAGTGATTGACAGCTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000622545.1
CDS-3UTR CCA 90 bp TCAGGCAGAGCCTATTATACCCCGATTACCAGAACAGACTCAGCAGGGTGGCAGTGCAGCTCTGCCCGCTaGGGCACTCGCTGTGCCCTT +
Preference number: 4 (lower is better)
Translates to: SGRAYYTPITRTDSAGWQCSSAR*GTRCAL
Trigger: AAGGGCACAGCGAGTGCCCCAGCGGGCAGAGCTGCA...CTGCCACCCTGCTGAGTCTGTTCTGGTAATCGGGGTATAATAGGCTCTGCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR TCA 90 bp GGCAGTGGTCTTTCAGGTGTGAGCAGTTCTTGCCCTCATAGTCCTCGGGGCACTCAGGAGGCGTCATTCTaGCACTGGCCAAGGCAGTCA +
Preference number: 4 (lower is better)
Translates to: GSGLSGVSSSCPHSPRGTQEASF*HWPRQS
Trigger: TGACTGCCTTGGCCAGTGTCAGAATGACGCCTCCTG...AGTGCCCCGAGGACTATGAGGGCAAGAACTGCTCACACCTGAAAGACCACTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622545.1
CDS-3UTR CCA 90 bp TCGATTTCCCAGCCAACCACAGAAACTACCATTGCCAGTGTAAGCCAGCTTGTCGAGGCTGAGTGTGTGTaGCTGCCCGGCTTCCGCCGC +
Preference number: 4 (lower is better)
Translates to: SISQPTTETTIASVSQLVEAECV*LPGFRR
Trigger: GCGGCGGAAGCCGGGCAGCCACACACACTCAGCCTC...GACAAGCTGGCTTACACTGGCAATGGTAGTTTCTGTGGTTGGCTGGGAAATCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR TCA 90 bp TCAGGCAGAGCCTATTATACCCCGATTACCAGAACAGACTCAGCAGGGTGGCAGTCGGCCAGGCGAAACTaGAAGGCAGCACGATGCGGT +
Preference number: 4 (lower is better)
Translates to: SGRAYYTPITRTDSAGWQSARRN*KAARCG
Trigger: ACCGCATCGTGCTGCCTTTCAGTTTCGCCTGGCCGA...CTGCCACCCTGCTGAGTCTGTTCTGGTAATCGGGGTATAATAGGCTCTGCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR GCA 90 bp CCTCTGTCAGGCAGAGCCTATTATACCCCGATTACCAGAACAGACTCAGCAGGGACTCGCCCACACCAGTaGAGGGGTGGACGAAGCACT +
Preference number: 4 (lower is better)
Translates to: PLSGRAYYTPITRTDSAGTRPHQ*RGGRST
Trigger: AGTGCTTCGTCCACCCCTGCACTGGTGTGGGCGAGT...CCCTGCTGAGTCTGTTCTGGTAATCGGGGTATAATAGGCTCTGCCTGACAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR GCA 90 bp TCAGGCAGAGCCTATTATACCCCGATTACCAGAACAGACTCAGCAGGGTGGCAGAGCGTGTACGCCGGCTaGTTGGCAAACCGGGCTTTC +
Preference number: 4 (lower is better)
Translates to: SGRAYYTPITRTDSAGWQSVYAG*LANRAF
Trigger: GAAAGCCCGGTTTGCCAAGCAGCCGGCGTACACGCT...CTGCCACCCTGCTGAGTCTGTTCTGGTAATCGGGGTATAATAGGCTCTGCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR CCA 90 bp ATGCGGCACTCGATTTCCCAGCCAACCACAGAAACTACCATTGCCAGTGTAAGCCCGTTAACCAGGTCCTaGCAGGTGCCCCCGTGGGAA +
Preference number: 4 (lower is better)
Translates to: MRHSISQPTTETTIASVSPLTRS*QVPPWE
Trigger: TTCCCACGGGGGCACCTGCCAGGACCTGGTTAACGG...GCTTACACTGGCAATGGTAGTTTCTGTGGTTGGCTGGGAAATCGAGTGCCGCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR CCA 90 bp TGCAGCTGTCAATCACTTCACAGGGGGTCGTGCGGCAGTGGTCTTTCAGGTGTGCACTGGGCACCGTTCTaGCAGGGATTAGGCTCACAA +
Preference number: 4 (lower is better)
Translates to: CSCQSLHRGSCGSGLSGVHWAPF*QGLGSQ
Trigger: TTGTGAGCCTAATCCCTGCCAGAACGGTGCCCAGTG...CACACCTGAAAGACCACTGCCGCACGACCCCCTGTGAAGTGATTGACAGCTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000622545.1
CDS-3UTR CCA 90 bp CCTCTGTCAGGCAGAGCCTATTATACCCCGATTACCAGAACAGACTCAGCAGGGGGGGTCGTGCGGCAGTaGTCTTTCAGGTGTGAGCAG +
Preference number: 4 (lower is better)
Translates to: PLSGRAYYTPITRTDSAGGVVRQ*SFRCEQ
Trigger: CTGCTCACACCTGAAAGACCACTGCCGCACGACCCC...CCCTGCTGAGTCTGTTCTGGTAATCGGGGTATAATAGGCTCTGCCTGACAGAGG
57% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR CCA 90 bp TGCAGCTGTCAATCACTTCACAGGGGGTCGTGCGGCAGTGGTCTTTCAGGTGTGCTTCAGGTGTGTCGTTaGAAGCCATGGCCACTGTGC +
Preference number: 4 (lower is better)
Translates to: CSCQSLHRGSCGSGLSGVLQVCR*KPWPLC
Trigger: GCACAGTGGCCATGGCTTCCAACGACACACCTGAAG...CACACCTGAAAGACCACTGCCGCACGACCCCCTGTGAAGTGATTGACAGCTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000622545.1
CDS-3UTR CCA 90 bp CCATCCCTCTGTCAGGCAGAGCCTATTATACCCCGATTACCAGAACAGACTCAGCACGTGCCCCCATTGTaGCAGGGGTTCTGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: PSLCQAEPIIPRLPEQTQHVPPL*QGFWLQ
Trigger: CTGCAGCCAGAACCCCTGCCACAATGGGGGCACGTG...CTGAGTCTGTTCTGGTAATCGGGGTATAATAGGCTCTGCCTGACAGAGGGATGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR CCA 90 bp CCATCCCTCTGTCAGGCAGAGCCTATTATACCCCGATTACCAGAACAGACTCAGACTGGTCGTCCAGGATaGGGATGCAGCTCTGCCCGC +
Preference number: 4 (lower is better)
Translates to: PSLCQAEPIIPRLPEQTQTGRPG*GCSSAR
Trigger: GCGGGCAGAGCTGCATCCCCATCCTGGACGACCAGT...CTGAGTCTGTTCTGGTAATCGGGGTATAATAGGCTCTGCCTGACAGAGGGATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR TCA 90 bp ATGCGGCACTCGATTTCCCAGCCAACCACAGAAACTACCATTGCCAGTGTAAGCATCTCCAACTCGAACTaGCCCGAGGCCCCACACACC +
Preference number: 4 (lower is better)
Translates to: MRHSISQPTTETTIASVSISNSN*PEAPHT
Trigger: GGTGTGTGGGGCCTCGGGTCAGTTCGAGTTGGAGAT...GCTTACACTGGCAATGGTAGTTTCTGTGGTTGGCTGGGAAATCGAGTGCCGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR TCA 90 bp CCTCTGTCAGGCAGAGCCTATTATACCCCGATTACCAGAACAGACTCAGCAGGGCAGGAGGCGTCATTCTaGCACTGGCCAAGGCAGTCA +
Preference number: 4 (lower is better)
Translates to: PLSGRAYYTPITRTDSAGQEASF*HWPRQS
Trigger: TGACTGCCTTGGCCAGTGTCAGAATGACGCCTCCTG...CCCTGCTGAGTCTGTTCTGGTAATCGGGGTATAATAGGCTCTGCCTGACAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR TCA 90 bp CCTCTGTCAGGCAGAGCCTATTATACCCCGATTACCAGAACAGACTCAGCAGGGCTCTTGCACTTCCCGTaGGGACCACAGACGTTGGAG +
Preference number: 4 (lower is better)
Translates to: PLSGRAYYTPITRTDSAGLLHFP*GPQTLE
Trigger: CTCCAACGTCTGTGGTCCTCACGGGAAGTGCAAGAG...CCCTGCTGAGTCTGTTCTGGTAATCGGGGTATAATAGGCTCTGCCTGACAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR GCA 90 bp CCTCTGTCAGGCAGAGCCTATTATACCCCGATTACCAGAACAGACTCAGCAGGGCAGCAGTTCCCGTTCTaGAGCTCCCCGTTCACGTTC +
Preference number: 4 (lower is better)
Translates to: PLSGRAYYTPITRTDSAGQQFPF*SSPFTF
Trigger: GAACGTGAACGGGGAGCTGCAGAACGGGAACTGCTG...CCCTGCTGAGTCTGTTCTGGTAATCGGGGTATAATAGGCTCTGCCTGACAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR GCA 90 bp TCAGGCAGAGCCTATTATACCCCGATTACCAGAACAGACTCAGCAGGGTGGCAGTTCAGCGTCTGCCACTaGCGGCTGGGGTTGATCATG +
Preference number: 4 (lower is better)
Translates to: SGRAYYTPITRTDSAGWQFSVCH*RLGLIM
Trigger: CATGATCAACCCCAGCCGGCAGTGGCAGACGCTGAA...CTGCCACCCTGCTGAGTCTGTTCTGGTAATCGGGGTATAATAGGCTCTGCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR GCA 90 bp GGTGTGTCGTTGGAAGCCATGGCCACTGTGCAGCTGTCAATCACTTCACAGGGGAGTCCTCGGGGCACTTaGAGAAATAGTCACTGGCAC +
Preference number: 4 (lower is better)
Translates to: GVSLEAMATVQLSITSQGSPRGT*RNSHWH
Trigger: GTGCCAGTGACTATTTCTGCAAGTGCCCCGAGGACT...CCCCTGTGAAGTGATTGACAGCTGCACAGTGGCCATGGCTTCCAACGACACACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622545.1
CDS-3UTR GCA 90 bp ATGCGGCACTCGATTTCCCAGCCAACCACAGAAACTACCATTGCCAGTGTAAGCCACTTGGCACCACTGTaGCCTGGAGGGCAGACACAC +
Preference number: 4 (lower is better)
Translates to: MRHSISQPTTETTIASVSHLAPL*PGGQTH
Trigger: GTGTGTCTGCCCTCCAGGGCACAGTGGTGCCAAGTG...GCTTACACTGGCAATGGTAGTTTCTGTGGTTGGCTGGGAAATCGAGTGCCGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR GCA 90 bp TCGAGTATGACACGACAGTTTAAAGAACTACAAGCCCTCAGACTCTACCTAGCGCGTCCAGGATGGGGATaGAGCTCTGCCCGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: SSMTRQFKELQALRLYLARPGWG*SSARWG
Trigger: GCCCCAGCGGGCAGAGCTGCATCCCCATCCTGGACG...CGCTAGGTAGAGTCTGAGGGCTTGTAGTTCTTTAAACTGTCGTGTCATACTCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR CCA 90 bp TGTGCAGCTGTCAATCACTTCACAGGGGGTCGTGCGGCAGTGGTCTTTCAGGTGTGTCGTTGGAAGCCATaGCCACTGTGCAGCTGTCAA +
Preference number: 4 (lower is better)
Translates to: CAAVNHFTGGRAAVVFQVCRWKP*PLCSCQ
Trigger: TTGACAGCTGCACAGTGGCCATGGCTTCCAACGACA...CACCTGAAAGACCACTGCCGCACGACCCCCTGTGAAGTGATTGACAGCTGCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000622545.1
CDS-3UTR CCA 90 bp CAGAAGCACATGGCAAAGCCGGTAGAACTACGTAAGCTCAGAAGAGGCCACACTTCGCTGTGCCCTTTGTaGAGCAGGCAAGGTCGAGGG +
Preference number: 4 (lower is better)
Translates to: QKHMAKPVELRKLRRGHTSLCPL*SRQGRG
Trigger: CCCTCGACCTTGCCTGCTCCACAAAGGGCACAGCGA...AGTGTGGCCTCTTCTGAGCTTACGTAGTTCTACCGGCTTTGCCATGTGCTTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR CCA 90 bp CAGAAGCACATGGCAAAGCCGGTAGAACTACGTAAGCTCAGAAGAGGCCACACTGGGTGGACGAAGCACTaGTCGTCCAGGATGGGGATG +
Preference number: 4 (lower is better)
Translates to: QKHMAKPVELRKLRRGHTGWTKH*SSRMGM
Trigger: CATCCCCATCCTGGACGACCAGTGCTTCGTCCACCC...AGTGTGGCCTCTTCTGAGCTTACGTAGTTCTACCGGCTTTGCCATGTGCTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR CCA 90 bp CAGAAGCACATGGCAAAGCCGGTAGAACTACGTAAGCTCAGAAGAGGCCACACTACACCAGTGCAGGGGTaGACGAAGCACTGGTCGTCC +
Preference number: 4 (lower is better)
Translates to: QKHMAKPVELRKLRRGHTTPVQG*TKHWSS
Trigger: GGACGACCAGTGCTTCGTCCACCCCTGCACTGGTGT...AGTGTGGCCTCTTCTGAGCTTACGTAGTTCTACCGGCTTTGCCATGTGCTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR CCA 90 bp CCTCTGTCAGGCAGAGCCTATTATACCCCGATTACCAGAACAGACTCAGCAGGGGCTCCCGCACGTTGTTaGTGGTGTTGTCCTCAGAGG +
Preference number: 4 (lower is better)
Translates to: PLSGRAYYTPITRTDSAGAPARC*WCCPQR
Trigger: CCTCTGAGGACAACACCACCAACAACGTGCGGGAGC...CCCTGCTGAGTCTGTTCTGGTAATCGGGGTATAATAGGCTCTGCCTGACAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR CCA 90 bp TCGAGTATGACACGACAGTTTAAAGAACTACAAGCCCTCAGACTCTACCTAGCGGGCTGGGCAGGCTCCTaGGAGCCTGATCCGAGACCG +
Preference number: 4 (lower is better)
Translates to: SSMTRQFKELQALRLYLAGWAGS*EPDPRP
Trigger: CGGTCTCGGATCAGGCTCCCAGGAGCCTGCCCAGCC...CGCTAGGTAGAGTCTGAGGGCTTGTAGTTCTTTAAACTGTCGTGTCATACTCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR TCA 90 bp TGCAGCTGTCAATCACTTCACAGGGGGTCGTGCGGCAGTGGTCTTTCAGGTGTGGTGGTCTTTCAGGTGTaGGCAGTTCTTGCCCTCATA +
Preference number: 4 (lower is better)
Translates to: CSCQSLHRGSCGSGLSGVVVFQV*AVLALI
Trigger: TATGAGGGCAAGAACTGCTCACACCTGAAAGACCAC...CACACCTGAAAGACCACTGCCGCACGACCCCCTGTGAAGTGATTGACAGCTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000622545.1
CDS-3UTR TCA 90 bp CAGAAGCACATGGCAAAGCCGGTAGAACTACGTAAGCTCAGAAGAGGCCACACTGTGGCCTCATCACACTaGCTGTCACGTGAGTGGCAG +
Preference number: 4 (lower is better)
Translates to: QKHMAKPVELRKLRRGHTVASSH*LSREWQ
Trigger: CTGCCACTCACGTGACAGTCAGTGTGATGAGGCCAC...AGTGTGGCCTCTTCTGAGCTTACGTAGTTCTACCGGCTTTGCCATGTGCTTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR TCA 90 bp CCTCTGTCAGGCAGAGCCTATTATACCCCGATTACCAGAACAGACTCAGCAGGGCACACCGGTAGCCATTaGTCTCATCCACACAGGTCG +
Preference number: 4 (lower is better)
Translates to: PLSGRAYYTPITRTDSAGHTGSH*SHPHRS
Trigger: CGACCTGTGTGGATGAGATCAATGGCTACCGGTGTG...CCCTGCTGAGTCTGTTCTGGTAATCGGGGTATAATAGGCTCTGCCTGACAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR GCA 90 bp TCGATTTCCCAGCCAACCACAGAAACTACCATTGCCAGTGTAAGCCAGCTTGTCTTCTGCTTCAGCGTCTaGCACTGCCGGCTGGGGTTG +
Preference number: 4 (lower is better)
Translates to: SISQPTTETTIASVSQLVFCFSV*HCRLGL
Trigger: CAACCCCAGCCGGCAGTGGCAGACGCTGAAGCAGAA...GACAAGCTGGCTTACACTGGCAATGGTAGTTTCTGTGGTTGGCTGGGAAATCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR GCA 90 bp ATGCGGCACTCGATTTCCCAGCCAACCACAGAAACTACCATTGCCAGTGTAAGCAGCCGTACTGGCACCTaGAGTCACCTGGGAGTTTGC +
Preference number: 4 (lower is better)
Translates to: MRHSISQPTTETTIASVSSRTGT*SHLGVC
Trigger: GCAAACTCCCAGGTGACTGCAGGTGCCAGTACGGCT...GCTTACACTGGCAATGGTAGTTTCTGTGGTTGGCTGGGAAATCGAGTGCCGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR GCA 90 bp CTCTGTCAGGCAGAGCCTATTATACCCCGATTACCAGAACAGACTCAGCAGGGTTCACAGTACAGGCCTTaGCAGCCGTACTGGCACCTG +
Preference number: 4 (lower is better)
Translates to: LCQAEPIIPRLPEQTQQGSQYRP*QPYWHL
Trigger: CAGGTGCCAGTACGGCTGGCAAGGCCTGTACTGTGA...ACCCTGCTGAGTCTGTTCTGGTAATCGGGGTATAATAGGCTCTGCCTGACAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR GCA 90 bp CCATCCCTCTGTCAGGCAGAGCCTATTATACCCCGATTACCAGAACAGACTCAGAGGGCTCATTACAGATaGCGTGGACGCATCCCGGGT +
Preference number: 4 (lower is better)
Translates to: PSLCQAEPIIPRLPEQTQRAHYR*RGRIPG
Trigger: ACCCGGGATGCGTCCACGGCATCTGTAATGAGCCCT...CTGAGTCTGTTCTGGTAATCGGGGTATAATAGGCTCTGCCTGACAGAGGGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR GCA 90 bp ATGCGGCACTCGATTTCCCAGCCAACCACAGAAACTACCATTGCCAGTGTAAGCCTTCACAGGGGGTCGTaGGGCAGTGGTCTTTCAGGT +
Preference number: 4 (lower is better)
Translates to: MRHSISQPTTETTIASVSLHRGS*GSGLSG
Trigger: ACCTGAAAGACCACTGCCGCACGACCCCCTGTGAAG...GCTTACACTGGCAATGGTAGTTTCTGTGGTTGGCTGGGAAATCGAGTGCCGCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR GCA 90 bp GTTGTAGCACTGGGCACCGTTCTGGCAGGGATTAGGCTCACAATAATCGATGTCCTTCACAGGGGGTCGTaGGGCAGTGGTCTTTCAGGT +
Preference number: 4 (lower is better)
Translates to: VVALGTVLAGIRLTIIDVLHRGS*GSGLSG
Trigger: ACCTGAAAGACCACTGCCGCACGACCCCCTGTGAAG...GACATCGATTATTGTGAGCCTAATCCCTGCCAGAACGGTGCCCAGTGCTACAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000622545.1
CDS-3UTR GCA 90 bp GTGCAGCTGTCAATCACTTCACAGGGGGTCGTGCGGCAGTGGTCTTTCAGGTGTAAGCCATGGCCACTGTaGAGCTGTCAATCACTTCAC +
Preference number: 4 (lower is better)
Translates to: VQLSITSQGVVRQWSFRCKPWPL*SCQSLH
Trigger: GTGAAGTGATTGACAGCTGCACAGTGGCCATGGCTT...ACACCTGAAAGACCACTGCCGCACGACCCCCTGTGAAGTGATTGACAGCTGCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000622545.1
CDS-3UTR GCA 90 bp TCGAGTATGACACGACAGTTTAAAGAACTACAAGCCCTCAGACTCTACCTAGCGATGGGGATGCAGCTCTaGCCGCTGGGGCACTCGCTG +
Preference number: 4 (lower is better)
Translates to: SSMTRQFKELQALRLYLAMGMQL*PLGHSL
Trigger: CAGCGAGTGCCCCAGCGGGCAGAGCTGCATCCCCAT...CGCTAGGTAGAGTCTGAGGGCTTGTAGTTCTTTAAACTGTCGTGTCATACTCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR CCA 90 bp TCAGGCAGAGCCTATTATACCCCGATTACCAGAACAGACTCAGCAGGGTGGCAGGCACCTGCAGTCACCTaGGAGTTTGCAAGACCCATG +
Preference number: 4 (lower is better)
Translates to: SGRAYYTPITRTDSAGWQAPAVT*EFARPM
Trigger: CATGGGTCTTGCAAACTCCCAGGTGACTGCAGGTGC...CTGCCACCCTGCTGAGTCTGTTCTGGTAATCGGGGTATAATAGGCTCTGCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR CCA 90 bp CAGAAGCACATGGCAAAGCCGGTAGAACTACGTAAGCTCAGAAGAGGCCACACTTCATTACAGATGCCGTaGACGCATCCCGGGTGTGGG +
Preference number: 4 (lower is better)
Translates to: QKHMAKPVELRKLRRGHTSLQMP*THPGCG
Trigger: CCCACACCCGGGATGCGTCCACGGCATCTGTAATGA...AGTGTGGCCTCTTCTGAGCTTACGTAGTTCTACCGGCTTTGCCATGTGCTTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR CCA 90 bp TCAGGCAGAGCCTATTATACCCCGATTACCAGAACAGACTCAGCAGGGTGGCAGCACTGGGCACCGTTCTaGCAGGGATTAGGCTCACAA +
Preference number: 4 (lower is better)
Translates to: SGRAYYTPITRTDSAGWQHWAPF*QGLGSQ
Trigger: TTGTGAGCCTAATCCCTGCCAGAACGGTGCCCAGTG...CTGCCACCCTGCTGAGTCTGTTCTGGTAATCGGGGTATAATAGGCTCTGCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR CCA 90 bp CAGCTGTCAATCACTTCACAGGGGGTCGTGCGGCAGTGGTCTTTCAGGTGTGAGTGCAGAAATAGTCACTaGCACGGTTGTAGCACTGGG +
Preference number: 4 (lower is better)
Translates to: QLSITSQGVVRQWSFRCECRNSH*HGCSTG
Trigger: CCCAGTGCTACAACCGTGCCAGTGACTATTTCTGCA...CTCACACCTGAAAGACCACTGCCGCACGACCCCCTGTGAAGTGATTGACAGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000622545.1
CDS-3UTR CCA 90 bp CAGAAGCACATGGCAAAGCCGGTAGAACTACGTAAGCTCAGAAGAGGCCACACTCCCGCACGTTGTTGGTaGTGTTGTCCTCAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: QKHMAKPVELRKLRRGHTPARCW*CCPQRL
Trigger: CAGCCTCTGAGGACAACACCACCAACAACGTGCGGG...AGTGTGGCCTCTTCTGAGCTTACGTAGTTCTACCGGCTTTGCCATGTGCTTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR CCA 90 bp CAGAAGCACATGGCAAAGCCGGTAGAACTACGTAAGCTCAGAAGAGGCCACACTTGTACGCCGGCTGCTTaGCAAACCGGGCTTTCTGCT +
Preference number: 4 (lower is better)
Translates to: QKHMAKPVELRKLRRGHTCTPAA*QTGLSA
Trigger: AGCAGAAAGCCCGGTTTGCCAAGCAGCCGGCGTACA...AGTGTGGCCTCTTCTGAGCTTACGTAGTTCTACCGGCTTTGCCATGTGCTTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR CCA 90 bp ATGCGGCACTCGATTTCCCAGCCAACCACAGAAACTACCATTGCCAGTGTAAGCTTGTCGGCGTGCCGTTaGGGGGCTTCTCTTCTCTGT +
Preference number: 4 (lower is better)
Translates to: MRHSISQPTTETTIASVSLSACR*GASLLC
Trigger: ACAGAGAAGAGAAGCCCCCCAACGGCACGCCGACAA...GCTTACACTGGCAATGGTAGTTTCTGTGGTTGGCTGGGAAATCGAGTGCCGCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR TCA 90 bp CCATCCCTCTGTCAGGCAGAGCCTATTATACCCCGATTACCAGAACAGACTCAGCAGGTCACGCGGATCTaGTACTCAAAGTGGGCAACG +
Preference number: 4 (lower is better)
Translates to: PSLCQAEPIIPRLPEQTQQVTRI*YSKWAT
Trigger: CGTTGCCCACTTTGAGTATCAGATCCGCGTGACCTG...CTGAGTCTGTTCTGGTAATCGGGGTATAATAGGCTCTGCCTGACAGAGGGATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR TCA 90 bp CAGAAGCACATGGCAAAGCCGGTAGAACTACGTAAGCTCAGAAGAGGCCACACTTACAAGTTCCCCCGTTaGGACACGGCTGATGAGTCC +
Preference number: 4 (lower is better)
Translates to: QKHMAKPVELRKLRRGHTYKFPR*DTADES
Trigger: GGACTCATCAGCCGTGTCTCAACGGGGGAACTTGTA...AGTGTGGCCTCTTCTGAGCTTACGTAGTTCTACCGGCTTTGCCATGTGCTTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR TCA 90 bp TCGATTTCCCAGCCAACCACAGAAACTACCATTGCCAGTGTAAGCCAGCTTGTCCAGCTGCCTCTGTTGTaGCAGGGATCAGAGAGGCAG +
Preference number: 4 (lower is better)
Translates to: SISQPTTETTIASVSQLVQLPLL*QGSERQ
Trigger: CTGCCTCTCTGATCCCTGTCACAACAGAGGCAGCTG...GACAAGCTGGCTTACACTGGCAATGGTAGTTTCTGTGGTTGGCTGGGAAATCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR TCA 90 bp GGCAGTGGTCTTTCAGGTGTGAGCAGTTCTTGCCCTCATAGTCCTCGGGGCACTTTTATGTCACAATTCTaGCCCATCCAGCCGGGAAGA +
Preference number: 4 (lower is better)
Translates to: GSGLSGVSSSCPHSPRGTFMSQF*PIQPGR
Trigger: TCTTCCCGGCTGGATGGGTCAGAATTGTGACATAAA...AGTGCCCCGAGGACTATGAGGGCAAGAACTGCTCACACCTGAAAGACCACTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622545.1
CDS-3UTR TCA 90 bp TCGATTTCCCAGCCAACCACAGAAACTACCATTGCCAGTGTAAGCCAGCTTGTCGCCACACCAGACCTTTaGGCAGGCGATCCGTCCATT +
Preference number: 4 (lower is better)
Translates to: SISQPTTETTIASVSQLVATPDL*AGDPSI
Trigger: AATGGACGGATCGCCTGCTCAAAGGTCTGGTGTGGC...GACAAGCTGGCTTACACTGGCAATGGTAGTTTCTGTGGTTGGCTGGGAAATCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR TCA 90 bp CCTCTGTCAGGCAGAGCCTATTATACCCCGATTACCAGAACAGACTCAGCAGGGTGTTCTCATAATCCTTaGTGGGGACCGTGTTGGCCC +
Preference number: 4 (lower is better)
Translates to: PLSGRAYYTPITRTDSAGCSHNP*WGPCWP
Trigger: GGGCCAACACGGTCCCCATCAAGGATTATGAGAACA...CCCTGCTGAGTCTGTTCTGGTAATCGGGGTATAATAGGCTCTGCCTGACAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR GCA 90 bp TCAGGCAGAGCCTATTATACCCCGATTACCAGAACAGACTCAGCAGGGTGGCAGAGTCCTCGGGGCACTTaGAGAAATAGTCACTGGCAC +
Preference number: 4 (lower is better)
Translates to: SGRAYYTPITRTDSAGWQSPRGT*RNSHWH
Trigger: GTGCCAGTGACTATTTCTGCAAGTGCCCCGAGGACT...CTGCCACCCTGCTGAGTCTGTTCTGGTAATCGGGGTATAATAGGCTCTGCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR GCA 90 bp CTCTGTCAGGCAGAGCCTATTATACCCCGATTACCAGAACAGACTCAGCAGGGTCCTCATCATAGCAGGTaGCACCGTTGTTGCACGTGG +
Preference number: 4 (lower is better)
Translates to: LCQAEPIIPRLPEQTQQGPHHSR*HRCCTW
Trigger: CCACGTGCAACAACGGTGGCACCTGCTATGATGAGG...ACCCTGCTGAGTCTGTTCTGGTAATCGGGGTATAATAGGCTCTGCCTGACAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR GCA 90 bp CCTCTGTCAGGCAGAGCCTATTATACCCCGATTACCAGAACAGACTCAGCAGGGGTTCCCTTACTGCTCTaGAGCAGATCACCTGCCTGT +
Preference number: 4 (lower is better)
Translates to: PLSGRAYYTPITRTDSAGVPLLL*SRSPAC
Trigger: ACAGGCAGGTGATCTGCTGCAGAGCAGTAAGGGAAC...CCCTGCTGAGTCTGTTCTGGTAATCGGGGTATAATAGGCTCTGCCTGACAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR CCA 90 bp TCAGGCAGAGCCTATTATACCCCGATTACCAGAACAGACTCAGCAGGGTGGCAGGACGCATCCCGGGTGTaGGATGCACTTATCACAGTA +
Preference number: 4 (lower is better)
Translates to: SGRAYYTPITRTDSAGWQDASRV*DALITV
Trigger: TACTGTGATAAGTGCATCCCACACCCGGGATGCGTC...CTGCCACCCTGCTGAGTCTGTTCTGGTAATCGGGGTATAATAGGCTCTGCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR CCA 90 bp ATGCGGCACTCGATTTCCCAGCCAACCACAGAAACTACCATTGCCAGTGTAAGCCTTCAGGTGTGTCGTTaGAAGCCATGGCCACTGTGC +
Preference number: 4 (lower is better)
Translates to: MRHSISQPTTETTIASVSLQVCR*KPWPLC
Trigger: GCACAGTGGCCATGGCTTCCAACGACACACCTGAAG...GCTTACACTGGCAATGGTAGTTTCTGTGGTTGGCTGGGAAATCGAGTGCCGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR CCA 90 bp CTCTGTCAGGCAGAGCCTATTATACCCCGATTACCAGAACAGACTCAGCAGGGTAAACTTCCTGGCACTTaGCACCACTGTGCCCTGGAG +
Preference number: 4 (lower is better)
Translates to: LCQAEPIIPRLPEQTQQGKLPGT*HHCALE
Trigger: CTCCAGGGCACAGTGGTGCCAAGTGCCAGGAAGTTT...ACCCTGCTGAGTCTGTTCTGGTAATCGGGGTATAATAGGCTCTGCCTGACAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR CCA 90 bp TCGAGTATGACACGACAGTTTAAAGAACTACAAGCCCTCAGACTCTACCTAGCGCAAGGCTCCCCTAGATaGGGCTCCCGCAGTTCCAGC +
Preference number: 4 (lower is better)
Translates to: SSMTRQFKELQALRLYLAQGSPR*GSRSSS
Trigger: GCTGGAACTGCGGGAGCCCCATCTAGGGGAGCCTTG...CGCTAGGTAGAGTCTGAGGGCTTGTAGTTCTTTAAACTGTCGTGTCATACTCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR TCA 90 bp TCGAGTATGACACGACAGTTTAAAGAACTACAAGCCCTCAGACTCTACCTAGCGACTGCCGGCTGGGGTTaGTCATGCCCGAGTGAGAAG +
Preference number: 4 (lower is better)
Translates to: SSMTRQFKELQALRLYLATAGWG*SCPSEK
Trigger: CTTCTCACTCGGGCATGATCAACCCCAGCCGGCAGT...CGCTAGGTAGAGTCTGAGGGCTTGTAGTTCTTTAAACTGTCGTGTCATACTCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR TCA 90 bp CCATCCCTCTGTCAGGCAGAGCCTATTATACCCCGATTACCAGAACAGACTCAGTCAGGGCAGGAACACTaGTATTTGTCAGGGCCTGTG +
Preference number: 4 (lower is better)
Translates to: PSLCQAEPIIPRLPEQTQSGQEH*YLSGPV
Trigger: CACAGGCCCTGACAAATATCAGTGTTCCTGCCCTGA...CTGAGTCTGTTCTGGTAATCGGGGTATAATAGGCTCTGCCTGACAGAGGGATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR TCA 90 bp TCGATTTCCCAGCCAACCACAGAAACTACCATTGCCAGTGTAAGCCAGCTTGTCTTCACAGTTGGGTCCTaGATACCCCTCAGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: SISQPTTETTIASVSQLVFTVGS*IPLRAG
Trigger: TCCTGCCCTGAGGGGTATTCAGGACCCAACTGTGAA...GACAAGCTGGCTTACACTGGCAATGGTAGTTTCTGTGGTTGGCTGGGAAATCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR TCA 90 bp CCTCTGTCAGGCAGAGCCTATTATACCCCGATTACCAGAACAGACTCAGCAGGGGTGGTCTTTCAGGTGTaGGCAGTTCTTGCCCTCATA +
Preference number: 4 (lower is better)
Translates to: PLSGRAYYTPITRTDSAGVVFQV*AVLALI
Trigger: TATGAGGGCAAGAACTGCTCACACCTGAAAGACCAC...CCCTGCTGAGTCTGTTCTGGTAATCGGGGTATAATAGGCTCTGCCTGACAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR TCA 90 bp TCGATTTCCCAGCCAACCACAGAAACTACCATTGCCAGTGTAAGCCAGCTTGTCCACAGTAGAAGTCATTaGCCAGGTCGCGACACGTGC +
Preference number: 4 (lower is better)
Translates to: SISQPTTETTIASVSQLVHSRSH*PGRDTC
Trigger: GCACGTGTCGCGACCTGGTCAATGACTTCTACTGTG...GACAAGCTGGCTTACACTGGCAATGGTAGTTTCTGTGGTTGGCTGGGAAATCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR TCA 90 bp CTCTGTCAGGCAGAGCCTATTATACCCCGATTACCAGAACAGACTCAGCAGGGTTCACACTCCCCATGGTaGTGCAAGGTCTCCCTGAAA +
Preference number: 4 (lower is better)
Translates to: LCQAEPIIPRLPEQTQQGSHSPW*CKVSLK
Trigger: TTTCAGGGAGACCTTGCATCACCATGGGGAGTGTGA...ACCCTGCTGAGTCTGTTCTGGTAATCGGGGTATAATAGGCTCTGCCTGACAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR GCA 90 bp ATGCGGCACTCGATTTCCCAGCCAACCACAGAAACTACCATTGCCAGTGTAAGCTCCCCGTTCACGTTCTaGATGGACAGGATCTCCAAC +
Preference number: 4 (lower is better)
Translates to: MRHSISQPTTETTIASVSSPFTF*MDRISN
Trigger: GTTGGAGATCCTGTCCATGCAGAACGTGAACGGGGA...GCTTACACTGGCAATGGTAGTTTCTGTGGTTGGCTGGGAAATCGAGTGCCGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR GCA 90 bp TCGAGTATGACACGACAGTTTAAAGAACTACAAGCCCTCAGACTCTACCTAGCGGCAACGCCCGTGTTCTaGTTCAGCGTCTGCCACTGC +
Preference number: 4 (lower is better)
Translates to: SSMTRQFKELQALRLYLAATPVF*FSVCHC
Trigger: GCAGTGGCAGACGCTGAAGCAGAACACGGGCGTTGC...CGCTAGGTAGAGTCTGAGGGCTTGTAGTTCTTTAAACTGTCGTGTCATACTCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR GCA 90 bp CTCTGTCAGGCAGAGCCTATTATACCCCGATTACCAGAACAGACTCAGCAGGGTGTCTCACAGAGGCACTaGCAGGGCTCATTACAGATG +
Preference number: 4 (lower is better)
Translates to: LCQAEPIIPRLPEQTQQGVSQRH*QGSLQM
Trigger: CATCTGTAATGAGCCCTGGCAGTGCCTCTGTGAGAC...ACCCTGCTGAGTCTGTTCTGGTAATCGGGGTATAATAGGCTCTGCCTGACAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR GCA 90 bp TCAGGCAGAGCCTATTATACCCCGATTACCAGAACAGACTCAGCAGGGTGGCAGAGGTCTCCTTACAGCTaGCTCTGTTGTGACAGGGAT +
Preference number: 4 (lower is better)
Translates to: SGRAYYTPITRTDSAGWQRSPYS*LCCDRD
Trigger: ATCCCTGTCACAACAGAGGCAGCTGTAAGGAGACCT...CTGCCACCCTGCTGAGTCTGTTCTGGTAATCGGGGTATAATAGGCTCTGCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR GCA 90 bp CTCTGTCAGGCAGAGCCTATTATACCCCGATTACCAGAACAGACTCAGCAGGGTCTCACAGTGATCGCCTaGATAGCCAGGTGGACAGAT +
Preference number: 4 (lower is better)
Translates to: LCQAEPIIPRLPEQTQQGLTVIA*IARWTD
Trigger: ATCTGTCCACCTGGCTATGCAGGCGATCACTGTGAG...ACCCTGCTGAGTCTGTTCTGGTAATCGGGGTATAATAGGCTCTGCCTGACAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR GCA 90 bp ATGCGGCACTCGATTTCCCAGCCAACCACAGAAACTACCATTGCCAGTGTAAGCCTCCATCCACACAGGTaGCGCTGTTGTAACAGGGAT +
Preference number: 4 (lower is better)
Translates to: MRHSISQPTTETTIASVSLHPHR*RCCNRD
Trigger: ATCCCTGTTACAACAGCGGCACCTGTGTGGATGGAG...GCTTACACTGGCAATGGTAGTTTCTGTGGTTGGCTGGGAAATCGAGTGCCGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR GCA 90 bp CTCTGTCAGGCAGAGCCTATTATACCCCGATTACCAGAACAGACTCAGCAGGGTGCAGTGCCCGCGGTCTaGTATACGATGTACTCCATT +
Preference number: 4 (lower is better)
Translates to: LCQAEPIIPRLPEQTQQGAVPAV*YTMYSI
Trigger: AATGGAGTACATCGTATAGCAGACCGCGGGCACTGC...ACCCTGCTGAGTCTGTTCTGGTAATCGGGGTATAATAGGCTCTGCCTGACAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR CCA 90 bp CAGAAGCACATGGCAAAGCCGGTAGAACTACGTAAGCTCAGAAGAGGCCACACTTGGCAGGTGCCCCCGTaGGAACAGTTATTAGGAGAA +
Preference number: 4 (lower is better)
Translates to: QKHMAKPVELRKLRRGHTWQVPP*EQLLGE
Trigger: TTCTCCTAATAACTGTTCCCACGGGGGCACCTGCCA...AGTGTGGCCTCTTCTGAGCTTACGTAGTTCTACCGGCTTTGCCATGTGCTTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR CCA 90 bp ATGCGGCACTCGATTTCCCAGCCAACCACAGAAACTACCATTGCCAGTGTAAGCGCCTGCATAGCCAGGTaGACAGATACAGCGATAACC +
Preference number: 4 (lower is better)
Translates to: MRHSISQPTTETTIASVSACIAR*TDTAIT
Trigger: GGTTATCGCTGTATCTGTCCACCTGGCTATGCAGGC...GCTTACACTGGCAATGGTAGTTTCTGTGGTTGGCTGGGAAATCGAGTGCCGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR CCA 90 bp CCATCCCTCTGTCAGGCAGAGCCTATTATACCCCGATTACCAGAACAGACTCAGGAGGACCACAGACGTTaGAGGAAATATACCGCACCC +
Preference number: 4 (lower is better)
Translates to: PSLCQAEPIIPRLPEQTQEDHRR*RKYTAP
Trigger: GGGTGCGGTATATTTCCTCCAACGTCTGTGGTCCTC...CTGAGTCTGTTCTGGTAATCGGGGTATAATAGGCTCTGCCTGACAGAGGGATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR CCA 90 bp CCATCCCTCTGTCAGGCAGAGCCTATTATACCCCGATTACCAGAACAGACTCAGCCATTTGGCCCCATCTaGTATCACACTCCCCATGGT +
Preference number: 4 (lower is better)
Translates to: PSLCQAEPIIPRLPEQTQPFGPI*YHTPHG
Trigger: ACCATGGGGAGTGTGATACCAGATGGGGCCAAATGG...CTGAGTCTGTTCTGGTAATCGGGGTATAATAGGCTCTGCCTGACAGAGGGATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR CCA 90 bp TCGAGTATGACACGACAGTTTAAAGAACTACAAGCCCTCAGACTCTACCTAGCGTCACCGGCTGGAGACTaGAAGACCGACACTCGCCCA +
Preference number: 4 (lower is better)
Translates to: SSMTRQFKELQALRLYLASPAGD*KTDTRP
Trigger: TGGGCGAGTGTCGGTCTTCCAGTCTCCAGCCGGTGA...CGCTAGGTAGAGTCTGAGGGCTTGTAGTTCTTTAAACTGTCGTGTCATACTCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR CCA 90 bp CCATCCCTCTGTCAGGCAGAGCCTATTATACCCCGATTACCAGAACAGACTCAGAACCGGGCTTTCTGCTaGTGTTTGTCCATGTCGTCC +
Preference number: 4 (lower is better)
Translates to: PSLCQAEPIIPRLPEQTQNRAFC*CLSMSS
Trigger: GGACGACATGGACAAACACCAGCAGAAAGCCCGGTT...CTGAGTCTGTTCTGGTAATCGGGGTATAATAGGCTCTGCCTGACAGAGGGATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR TCA 90 bp TCAACCACTCACATTTTGGCTATGTTAAGTCATAGCTCAACTTGTTCCCTTACTCCGCAGGTAACACAATaGCGCGTGCCCGCCCGGCTC +
Preference number: 4 (lower is better)
Translates to: STTHILAMLSHSSTCSLTPQVTQ*RVPARL
Trigger: GAGCCGGGCGGGCACGCGTCATTGTGTTACCTGCGG...AGTAAGGGAACAAGTTGAGCTATGACTTAACATAGCCAAAATGTGAGTGGTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR TCA 90 bp CAGCTGTCAATCACTTCACAGGGGGTCGTGCGGCAGTGGTCTTTCAGGTGTGAGAGTAGTAGCTGGCAATaGGATTCTTACAGGATTTGG +
Preference number: 4 (lower is better)
Translates to: QLSITSQGVVRQWSFRCESSSWQ*DSYRIW
Trigger: CCAAATCCTGTAAGAATCTCATTGCCAGCTACTACT...CTCACACCTGAAAGACCACTGCCGCACGACCCCCTGTGAAGTGATTGACAGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000622545.1
CDS-3UTR TCA 90 bp CAGAAGCACATGGCAAAGCCGGTAGAACTACGTAAGCTCAGAAGAGGCCACACTTGTTACAGTCACAGGTaGATTTGCCTCCCGACTGAC +
Preference number: 4 (lower is better)
Translates to: QKHMAKPVELRKLRRGHTCYSHR*ICLPTD
Trigger: GTCAGTCGGGAGGCAAATTCACCTGTGACTGTAACA...AGTGTGGCCTCTTCTGAGCTTACGTAGTTCTACCGGCTTTGCCATGTGCTTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR TCA 90 bp CCATCCCTCTGTCAGGCAGAGCCTATTATACCCCGATTACCAGAACAGACTCAGACACTGACTGTCACGTaGGTGGCAGGTCTTTCCTTT +
Preference number: 4 (lower is better)
Translates to: PSLCQAEPIIPRLPEQTQTLTVT*VAGLSF
Trigger: AAAGGAAAGACCTGCCACTCACGTGACAGTCAGTGT...CTGAGTCTGTTCTGGTAATCGGGGTATAATAGGCTCTGCCTGACAGAGGGATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR GCA 90 bp TCAGGCAGAGCCTATTATACCCCGATTACCAGAACAGACTCAGCAGGGTGGCAGGGCGGCAGAACTTATTaGAGCCAAAGCCATAGTAGT +
Preference number: 4 (lower is better)
Translates to: SGRAYYTPITRTDSAGWQGGRTY*SQSHSS
Trigger: ACTACTATGGCTTTGGCTGCAATAAGTTCTGCCGCC...CTGCCACCCTGCTGAGTCTGTTCTGGTAATCGGGGTATAATAGGCTCTGCCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR GCA 90 bp TCGATTTCCCAGCCAACCACAGAAACTACCATTGCCAGTGTAAGCCAGCTTGTCATCCCGGGTGTGGGATaGACTTATCACAGTACAGGC +
Preference number: 4 (lower is better)
Translates to: SISQPTTETTIASVSQLVIPGVG*TYHSTG
Trigger: GCCTGTACTGTGATAAGTGCATCCCACACCCGGGAT...GACAAGCTGGCTTACACTGGCAATGGTAGTTTCTGTGGTTGGCTGGGAAATCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR GCA 90 bp ACTTGCAGAAATAGTCACTGGCACGGTTGTAGCACTGGGCACCGTTCTGGCAGGCATTCAAACAGGGGTTaGTGGCACATTCATCGATGT +
Preference number: 4 (lower is better)
Translates to: TCRNSHWHGCSTGHRSGRHSNRG*WHIHRC
Trigger: ACATCGATGAATGTGCCAGCAACCCCTGTTTGAATG...CCTGCCAGAACGGTGCCCAGTGCTACAACCGTGCCAGTGACTATTTCTGCAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622545.1
CDS-3UTR GCA 90 bp TCGAGTATGACACGACAGTTTAAAGAACTACAAGCCCTCAGACTCTACCTAGCGCTCCCGACTGACTCTTaGACTTCCCGTGAGGACCAC +
Preference number: 4 (lower is better)
Translates to: SSMTRQFKELQALRLYLALPTDS*TSREDH
Trigger: GTGGTCCTCACGGGAAGTGCAAGAGTCAGTCGGGAG...CGCTAGGTAGAGTCTGAGGGCTTGTAGTTCTTTAAACTGTCGTGTCATACTCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR GCA 90 bp TCAGGCAGAGCCTATTATACCCCGATTACCAGAACAGACTCAGCAGGGTGGCAGAACTTGTTCCCTTACTaGTCTGCAGCAGATCACCTG +
Preference number: 4 (lower is better)
Translates to: SGRAYYTPITRTDSAGWQNLFPY*SAADHL
Trigger: CAGGTGATCTGCTGCAGAGCAGTAAGGGAACAAGTT...CTGCCACCCTGCTGAGTCTGTTCTGGTAATCGGGGTATAATAGGCTCTGCCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR CCA 90 bp CCATCCCTCTGTCAGGCAGAGCCTATTATACCCCGATTACCAGAACAGACTCAGCGTTCACGTTCTGCATaGACAGGATCTCCAACTCGA +
Preference number: 4 (lower is better)
Translates to: PSLCQAEPIIPRLPEQTQRSRSA*TGSPTR
Trigger: TCGAGTTGGAGATCCTGTCCATGCAGAACGTGAACG...CTGAGTCTGTTCTGGTAATCGGGGTATAATAGGCTCTGCCTGACAGAGGGATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR CCA 90 bp CAGAAGCACATGGCAAAGCCGGTAGAACTACGTAAGCTCAGAAGAGGCCACACTGAACGGTGTCATTACTaGAATCCCACGCCTCCACAA +
Preference number: 4 (lower is better)
Translates to: QKHMAKPVELRKLRRGHTERCHY*NPTPPQ
Trigger: TTGTGGAGGCGTGGGATTCCAGTAATGACACCGTTC...AGTGTGGCCTCTTCTGAGCTTACGTAGTTCTACCGGCTTTGCCATGTGCTTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR CCA 90 bp TCAGGCAGAGCCTATTATACCCCGATTACCAGAACAGACTCAGCAGGGTGGCAGCAAAGAAGTCATCTCTaGGGCGGCAGAACTTATTGC +
Preference number: 4 (lower is better)
Translates to: SGRAYYTPITRTDSAGWQQRSHL*GGRTYC
Trigger: GCAATAAGTTCTGCCGCCCCAGAGATGACTTCTTTG...CTGCCACCCTGCTGAGTCTGTTCTGGTAATCGGGGTATAATAGGCTCTGCCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR CCA 90 bp CAGAAGCACATGGCAAAGCCGGTAGAACTACGTAAGCTCAGAAGAGGCCACACTTGCAGAAATAGTCACTaGCACGGTTGTAGCACTGGG +
Preference number: 4 (lower is better)
Translates to: QKHMAKPVELRKLRRGHTCRNSH*HGCSTG
Trigger: CCCAGTGCTACAACCGTGCCAGTGACTATTTCTGCA...AGTGTGGCCTCTTCTGAGCTTACGTAGTTCTACCGGCTTTGCCATGTGCTTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR CCA 90 bp TCGATTTCCCAGCCAACCACAGAAACTACCATTGCCAGTGTAAGCCAGCTTGTCTGTCGTTGGAAGCCATaGCCACTGTGCAGCTGTCAA +
Preference number: 4 (lower is better)
Translates to: SISQPTTETTIASVSQLVCRWKP*PLCSCQ
Trigger: TTGACAGCTGCACAGTGGCCATGGCTTCCAACGACA...GACAAGCTGGCTTACACTGGCAATGGTAGTTTCTGTGGTTGGCTGGGAAATCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR CCA 90 bp TCGATTTCCCAGCCAACCACAGAAACTACCATTGCCAGTGTAAGCCAGCTTGTCATGGGGTTTTTGATCTaGTTCAGCTGCTCCCGCACG +
Preference number: 4 (lower is better)
Translates to: SISQPTTETTIASVSQLVMGFLI*FSCSRT
Trigger: CGTGCGGGAGCAGCTGAACCAGATCAAAAACCCCAT...GACAAGCTGGCTTACACTGGCAATGGTAGTTTCTGTGGTTGGCTGGGAAATCGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR CCA 90 bp CCTCTGTCAGGCAGAGCCTATTATACCCCGATTACCAGAACAGACTCAGCAGGGTTTGTTTGTCCAGTTTaGGTGTTTTGTCGGCGTGCC +
Preference number: 4 (lower is better)
Translates to: PLSGRAYYTPITRTDSAGFVCPV*VFCRRA
Trigger: GGCACGCCGACAAAACACCCAAACTGGACAAACAAA...CCCTGCTGAGTCTGTTCTGGTAATCGGGGTATAATAGGCTCTGCCTGACAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254958.10
3UTR CAA 72 bp AGGGGACACACAACCAGGGTACTGTTGACTAGCTTTTaGCATAGCTGTGAGATGCGGCACTCGATTTCCCAG +
Preference number: 4 (lower is better)
Translates to: RGHTTRVLLTSF*HSCEMRHSISQ
Trigger: CTGGGAAATCGAGTGCCGCATCTCACAGCTATGCAAAAAGCTAGTCAACAGTACCCTGGTTGTGTGTCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR TCA 90 bp TCAACCACTCACATTTTGGCTATGTTAAGTCATAGCTCAACTTGTTCCCTTACTAGGTGTTGCCCCCGATaGCAGGCGTGGACCCTGAGC +
Preference number: 4 (lower is better)
Translates to: STTHILAMLSHSSTCSLTRCCPR*QAWTLS
Trigger: GCTCAGGGTCCACGCCTGTCATCGGGGGCAACACCT...AGTAAGGGAACAAGTTGAGCTATGACTTAACATAGCCAAAATGTGAGTGGTTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR TCA 90 bp ATGCGGCACTCGATTTCCCAGCCAACCACAGAAACTACCATTGCCAGTGTAAGCTTTATGTCACAATTCTaGCCCATCCAGCCGGGAAGA +
Preference number: 4 (lower is better)
Translates to: MRHSISQPTTETTIASVSFMSQF*PIQPGR
Trigger: TCTTCCCGGCTGGATGGGTCAGAATTGTGACATAAA...GCTTACACTGGCAATGGTAGTTTCTGTGGTTGGCTGGGAAATCGAGTGCCGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR TCA 90 bp TGCAGAAATAGTCACTGGCACGGTTGTAGCACTGGGCACCGTTCTGGCAGGGATGACACTGGAATCTGTTaGTTTCATTCTGACAGTGAC +
Preference number: 4 (lower is better)
Translates to: CRNSHWHGCSTGHRSGRDDTGIC*FHSDSD
Trigger: GTCACTGTCAGAATGAAATCAACAGATTCCAGTGTC...ATCCCTGCCAGAACGGTGCCCAGTGCTACAACCGTGCCAGTGACTATTTCTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622545.1
CDS-3UTR TCA 90 bp CCTCTGTCAGGCAGAGCCTATTATACCCCGATTACCAGAACAGACTCAGCAGGGTCCAAAGGCACAAGGTaGAGACTGGCATTCATTGAT +
Preference number: 4 (lower is better)
Translates to: PLSGRAYYTPITRTDSAGSKGTR*RLAFID
Trigger: ATCAATGAATGCCAGTCTTCACCTTGTGCCTTTGGA...CCCTGCTGAGTCTGTTCTGGTAATCGGGGTATAATAGGCTCTGCCTGACAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR TCA 90 bp TCGATTTCCCAGCCAACCACAGAAACTACCATTGCCAGTGTAAGCCAGCTTGTCTATTTCATTGTTCGCTaGAGGGGAAGGCTCGCAAGC +
Preference number: 4 (lower is better)
Translates to: SISQPTTETTIASVSQLVYFIVR*RGRLAS
Trigger: GCTTGCGAGCCTTCCCCTTCAGCGAACAATGAAATA...GACAAGCTGGCTTACACTGGCAATGGTAGTTTCTGTGGTTGGCTGGGAAATCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR TCA 90 bp TCAACCACTCACATTTTGGCTATGTTAAGTCATAGCTCAACTTGTTCCCTTACTAGGCTCCTGGGAGCCTaGTCCGAGACCGTGTCGGCT +
Preference number: 4 (lower is better)
Translates to: STTHILAMLSHSSTCSLTRLLGA*SETVSA
Trigger: AGCCGACACGGTCTCGGATCAGGCTCCCAGGAGCCT...AGTAAGGGAACAAGTTGAGCTATGACTTAACATAGCCAAAATGTGAGTGGTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR GCA 90 bp TCAGGCAGAGCCTATTATACCCCGATTACCAGAACAGACTCAGCAGGGTGGCAGCCATCCAGCCTTCCATaGAAGTTTTGTTGCCATTCT +
Preference number: 4 (lower is better)
Translates to: SGRAYYTPITRTDSAGWQPSSLP*KFCCHS
Trigger: AGAATGGCAACAAAACTTGCATGGAAGGCTGGATGG...CTGCCACCCTGCTGAGTCTGTTCTGGTAATCGGGGTATAATAGGCTCTGCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR GCA 90 bp ATGCGGCACTCGATTTCCCAGCCAACCACAGAAACTACCATTGCCAGTGTAAGCAATAGGAGTCAGAGGTaGACTTTGTCTTCACCGGCT +
Preference number: 4 (lower is better)
Translates to: MRHSISQPTTETTIASVSNRSQR*TLSSPA
Trigger: AGCCGGTGAAGACAAAGTGCACCTCTGACTCCTATT...GCTTACACTGGCAATGGTAGTTTCTGTGGTTGGCTGGGAAATCGAGTGCCGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR GCA 90 bp TCAGGCAGAGCCTATTATACCCCGATTACCAGAACAGACTCAGCAGGGTGGCAGGCTGTGGTTCTGAGCTaGAAAGGCACTTTCAAATAC +
Preference number: 4 (lower is better)
Translates to: SGRAYYTPITRTDSAGWQAVVLS*KGTFKY
Trigger: GTATTTGAAAGTGCCTTTGCAGCTCAGAACCACAGC...CTGCCACCCTGCTGAGTCTGTTCTGGTAATCGGGGTATAATAGGCTCTGCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR GCA 90 bp CCTCTGTCAGGCAGAGCCTATTATACCCCGATTACCAGAACAGACTCAGCAGGGGTCATTTGTGATCGTTaGTGTGGTTCTGAGCTGCAA +
Preference number: 4 (lower is better)
Translates to: PLSGRAYYTPITRTDSAGVICDR*CGSELQ
Trigger: TTGCAGCTCAGAACCACAGCAACGATCACAAATGAC...CCCTGCTGAGTCTGTTCTGGTAATCGGGGTATAATAGGCTCTGCCTGACAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR CCA 90 bp ATGCGGCACTCGATTTCCCAGCCAACCACAGAAACTACCATTGCCAGTGTAAGCATATACTCCGCCGATTaGAGCATGCACGACTGGAAA +
Preference number: 4 (lower is better)
Translates to: MRHSISQPTTETTIASVSIYSAD*SMHDWK
Trigger: TTTCCAGTCGTGCATGCTCCAATCGGCGGAGTATAT...GCTTACACTGGCAATGGTAGTTTCTGTGGTTGGCTGGGAAATCGAGTGCCGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR CCA 90 bp GTGCAGCTGTCAATCACTTCACAGGGGGTCGTGCGGCAGTGGTCTTTCAGGTGTCGTTTACACAAGGTTTaGCCTCACATTCATTTGCAT +
Preference number: 4 (lower is better)
Translates to: VQLSITSQGVVRQWSFRCRLHKV*PHIHLH
Trigger: ATGCAAATGAATGTGAGGCCAAACCTTGTGTAAACG...ACACCTGAAAGACCACTGCCGCACGACCCCCTGTGAAGTGATTGACAGCTGCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000622545.1
CDS-3UTR CCA 90 bp ACTTGCAGAAATAGTCACTGGCACGGTTGTAGCACTGGGCACCGTTCTGGCAGGGTGGGACACAGACACTaGAATCTGTTGATTTCATTC +
Preference number: 4 (lower is better)
Translates to: TCRNSHWHGCSTGHRSGRVGHRH*NLLISF
Trigger: GAATGAAATCAACAGATTCCAGTGTCTGTGTCCCAC...CCTGCCAGAACGGTGCCCAGTGCTACAACCGTGCCAGTGACTATTTCTGCAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622545.1
CDS-3UTR CCA 90 bp TTTATTACACAGTCTAATTCTATAGGTCCTCAGCAGAAGCTCCTCCCCATAAGCGGGGTCGTGCGGCAGTaGTCTTTCAGGTGTGAGCAG +
Preference number: 4 (lower is better)
Translates to: FITQSNSIGPQQKLLPISGVVRQ*SFRCEQ
Trigger: CTGCTCACACCTGAAAGACCACTGCCGCACGACCCC...GCTTATGGGGAGGAGCTTCTGCTGAGGACCTATAGAATTAGACTGTGTAATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613518.1
CDS-3UTR CCA 90 bp CCATCCCTCTGTCAGGCAGAGCCTATTATACCCCGATTACCAGAACAGACTCAGAGTCATCATCCCATTTaGCCCCATCTGGTATCACAC +
Preference number: 4 (lower is better)
Translates to: PSLCQAEPIIPRLPEQTQSHHPI*PHLVSH
Trigger: GTGTGATACCAGATGGGGCCAAATGGGATGATGACT...CTGAGTCTGTTCTGGTAATCGGGGTATAATAGGCTCTGCCTGACAGAGGGATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR CCA 90 bp TCGAGTATGACACGACAGTTTAAAGAACTACAAGCCCTCAGACTCTACCTAGCGGACATCTGGCAGAAGTaGGAGCTCAAAGACCAGGGG +
Preference number: 4 (lower is better)
Translates to: SSMTRQFKELQALRLYLADIWQK*ELKDQG
Trigger: CCCCTGGTCTTTGAGCTCCCACTTCTGCCAGATGTC...CGCTAGGTAGAGTCTGAGGGCTTGTAGTTCTTTAAACTGTCGTGTCATACTCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR CCA 90 bp CCTCTGTCAGGCAGAGCCTATTATACCCCGATTACCAGAACAGACTCAGCAGGGATTCCATCAGTATTCTaGGCACAGAAGCCCATCCTA +
Preference number: 4 (lower is better)
Translates to: PLSGRAYYTPITRTDSAGIPSVF*AQKPIL
Trigger: TAGGATGGGCTTCTGTGCCCAGAATACTGATGGAAT...CCCTGCTGAGTCTGTTCTGGTAATCGGGGTATAATAGGCTCTGCCTGACAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR TCA 90 bp TCAGGCAGAGCCTATTATACCCCGATTACCAGAACAGACTCAGCAGGGTGGCAGGACACTGGAATCTGTTaGTTTCATTCTGACAGTGAC +
Preference number: 4 (lower is better)
Translates to: SGRAYYTPITRTDSAGWQDTGIC*FHSDSD
Trigger: GTCACTGTCAGAATGAAATCAACAGATTCCAGTGTC...CTGCCACCCTGCTGAGTCTGTTCTGGTAATCGGGGTATAATAGGCTCTGCCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR TCA 90 bp TTTATTACACAGTCTAATTCTATAGGTCCTCAGCAGAAGCTCCTCCCCATAAGCCTCTTGCACTTCCCGTaGGGACCACAGACGTTGGAG +
Preference number: 4 (lower is better)
Translates to: FITQSNSIGPQQKLLPISLLHFP*GPQTLE
Trigger: CTCCAACGTCTGTGGTCCTCACGGGAAGTGCAAGAG...GCTTATGGGGAGGAGCTTCTGCTGAGGACCTATAGAATTAGACTGTGTAATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613518.1
CDS-3UTR TCA 90 bp ATGCGGCACTCGATTTCCCAGCCAACCACAGAAACTACCATTGCCAGTGTAAGCCAACCAGGGTACTGTTaGCTAGCTTTTTGCATAGCT +
Preference number: 4 (lower is better)
Translates to: MRHSISQPTTETTIASVSQPGYC*LAFCIA
Trigger: AGCTATGCAAAAAGCTAGTCAACAGTACCCTGGTTG...GCTTACACTGGCAATGGTAGTTTCTGTGGTTGGCTGGGAAATCGAGTGCCGCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR TCA 90 bp ATGCGGCACTCGATTTCCCAGCCAACCACAGAAACTACCATTGCCAGTGTAAGCTCACGGTCTCAATGGTaGACCAACAAGATTACTCTG +
Preference number: 4 (lower is better)
Translates to: MRHSISQPTTETTIASVSSRSQW*TNKITL
Trigger: CAGAGTAATCTTGTTGGTTCACCATTGAGACCGTGA...GCTTACACTGGCAATGGTAGTTTCTGTGGTTGGCTGGGAAATCGAGTGCCGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR GCA 90 bp CCATCCCTCTGTCAGGCAGAGCCTATTATACCCCGATTACCAGAACAGACTCAGCATTCAAACAGGGGTTaGTGGCACATTCATCGATGT +
Preference number: 4 (lower is better)
Translates to: PSLCQAEPIIPRLPEQTQHSNRG*WHIHRC
Trigger: ACATCGATGAATGTGCCAGCAACCCCTGTTTGAATG...CTGAGTCTGTTCTGGTAATCGGGGTATAATAGGCTCTGCCTGACAGAGGGATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR GCA 90 bp TTTATTACACAGTCTAATTCTATAGGTCCTCAGCAGAAGCTCCTCCCCATAAGCCTTCACAGGGGGTCGTaGGGCAGTGGTCTTTCAGGT +
Preference number: 4 (lower is better)
Translates to: FITQSNSIGPQQKLLPISLHRGS*GSGLSG
Trigger: ACCTGAAAGACCACTGCCGCACGACCCCCTGTGAAG...GCTTATGGGGAGGAGCTTCTGCTGAGGACCTATAGAATTAGACTGTGTAATAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000613518.1
CDS-3UTR GCA 90 bp ATTACACAGTCTAATTCTATAGGTCCTCAGCAGAAGCTCCTCCCCATAAGCTATCTCCCGACTGACTCTTaGACTTCCCGTGAGGACCAC +
Preference number: 4 (lower is better)
Translates to: ITQSNSIGPQQKLLPISYLPTDS*TSREDH
Trigger: GTGGTCCTCACGGGAAGTGCAAGAGTCAGTCGGGAG...ATAGCTTATGGGGAGGAGCTTCTGCTGAGGACCTATAGAATTAGACTGTGTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613518.1
CDS-3UTR GCA 90 bp TCGATTTCCCAGCCAACCACAGAAACTACCATTGCCAGTGTAAGCCAGCTTGTCAACAGGGATGAGGGCTaGAGTCATTGGTATTCTGAG +
Preference number: 4 (lower is better)
Translates to: SISQPTTETTIASVSQLVNRDEG*SHWYSE
Trigger: CTCAGAATACCAATGACTGCAGCCCTCATCCCTGTT...GACAAGCTGGCTTACACTGGCAATGGTAGTTTCTGTGGTTGGCTGGGAAATCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR GCA 90 bp TCGAGTATGACACGACAGTTTAAAGAACTACAAGCCCTCAGACTCTACCTAGCGTGCATAGCTGTGAGATaGGGCACTCGATTTCCCAGC +
Preference number: 4 (lower is better)
Translates to: SSMTRQFKELQALRLYLACIAVR*GTRFPS
Trigger: GCTGGGAAATCGAGTGCCGCATCTCACAGCTATGCA...CGCTAGGTAGAGTCTGAGGGCTTGTAGTTCTTTAAACTGTCGTGTCATACTCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR CCA 90 bp TCAACCACTCACATTTTGGCTATGTTAAGTCATAGCTCAACTTGTTCCCTTACTAGGCCCCACACACCTTaGCTCGCAGGGCACAGAGCA +
Preference number: 4 (lower is better)
Translates to: STTHILAMLSHSSTCSLTRPHTP*LAGHRA
Trigger: TGCTCTGTGCCCTGCGAGCCAAGGTGTGTGGGGCCT...AGTAAGGGAACAAGTTGAGCTATGACTTAACATAGCCAAAATGTGAGTGGTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR CCA 90 bp TCGATTTCCCAGCCAACCACAGAAACTACCATTGCCAGTGTAAGCCAGCTTGTCCAGCAATTTCACAGTTaGGTCCTGAATACCCCTCAG +
Preference number: 4 (lower is better)
Translates to: SISQPTTETTIASVSQLVQQFHS*VLNTPQ
Trigger: CTGAGGGGTATTCAGGACCCAACTGTGAAATTGCTG...GACAAGCTGGCTTACACTGGCAATGGTAGTTTCTGTGGTTGGCTGGGAAATCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR CCA 90 bp CAGAAGCACATGGCAAAGCCGGTAGAACTACGTAAGCTCAGAAGAGGCCACACTTCATTTGCATCTAACTaGCACGTTTTCCCAGTCCAC +
Preference number: 4 (lower is better)
Translates to: QKHMAKPVELRKLRRGHTSFASN*HVFPVH
Trigger: GTGGACTGGGAAAACGTGCCAGTTAGATGCAAATGA...AGTGTGGCCTCTTCTGAGCTTACGTAGTTCTACCGGCTTTGCCATGTGCTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR CCA 90 bp TCGAGTATGACACGACAGTTTAAAGAACTACAAGCCCTCAGACTCTACCTAGCGCACCGTTGTTGCACGTaGCCTCATCACACTGACTGT +
Preference number: 4 (lower is better)
Translates to: SSMTRQFKELQALRLYLAHRCCT*PHHTDC
Trigger: ACAGTCAGTGTGATGAGGCCACGTGCAACAACGGTG...CGCTAGGTAGAGTCTGAGGGCTTGTAGTTCTTTAAACTGTCGTGTCATACTCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR TCA 90 bp TCAACCACTCACATTTTGGCTATGTTAAGTCATAGCTCAACTTGTTCCCTTACTGCCGTGACGCGGGACTaGTACTCCTTGAGGCACACT +
Preference number: 4 (lower is better)
Translates to: STTHILAMLSHSSTCSLTAVTRD*YSLRHT
Trigger: AGTGTGCCTCAAGGAGTATCAGTCCCGCGTCACGGC...AGTAAGGGAACAAGTTGAGCTATGACTTAACATAGCCAAAATGTGAGTGGTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR TCA 90 bp TCGATTTCCCAGCCAACCACAGAAACTACCATTGCCAGTGTAAGCCAGCTTGTCGAGTCCCACAGTAATTaGGATCTTTGTCACAGAGCT +
Preference number: 4 (lower is better)
Translates to: SISQPTTETTIASVSQLVESHSN*DLCHRA
Trigger: AGCTCTGTGACAAAGATCTCAATTACTGTGGGACTC...GACAAGCTGGCTTACACTGGCAATGGTAGTTTCTGTGGTTGGCTGGGAAATCGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR TCA 90 bp CAGAAGCACATGGCAAAGCCGGTAGAACTACGTAAGCTCAGAAGAGGCCACACTAGTAGTAGCTGGCAATaGGATTCTTACAGGATTTGG +
Preference number: 4 (lower is better)
Translates to: QKHMAKPVELRKLRRGHTSSSWQ*DSYRIW
Trigger: CCAAATCCTGTAAGAATCTCATTGCCAGCTACTACT...AGTGTGGCCTCTTCTGAGCTTACGTAGTTCTACCGGCTTTGCCATGTGCTTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR TCA 90 bp ATGCGGCACTCGATTTCCCAGCCAACCACAGAAACTACCATTGCCAGTGTAAGCAAGACTGGCATTCATTaGTGTTTATTCTGCAGTCGG +
Preference number: 4 (lower is better)
Translates to: MRHSISQPTTETTIASVSKTGIH*CLFCSR
Trigger: CCGACTGCAGAATAAACATCAATGAATGCCAGTCTT...GCTTACACTGGCAATGGTAGTTTCTGTGGTTGGCTGGGAAATCGAGTGCCGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR TCA 90 bp ATGCGGCACTCGATTTCCCAGCCAACCACAGAAACTACCATTGCCAGTGTAAGCCGTAGTAAGACCTGGTaGCATCATCTCCTTGTTAAA +
Preference number: 4 (lower is better)
Translates to: MRHSISQPTTETTIASVSRSKTW*HHLLVK
Trigger: TTTAACAAGGAGATGATGTCACCAGGTCTTACTACG...GCTTACACTGGCAATGGTAGTTTCTGTGGTTGGCTGGGAAATCGAGTGCCGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR TCA 90 bp TCGATTTCCCAGCCAACCACAGAAACTACCATTGCCAGTGTAAGCCAGCTTGTCCCTCAGACTCGAGTATaGCACGACAGTTTAAAGAAC +
Preference number: 4 (lower is better)
Translates to: SISQPTTETTIASVSQLVPQTRV*HDSLKN
Trigger: GTTCTTTAAACTGTCGTGTCATACTCGAGTCTGAGG...GACAAGCTGGCTTACACTGGCAATGGTAGTTTCTGTGGTTGGCTGGGAAATCGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR TCA 90 bp ATTACACAGTCTAATTCTATAGGTCCTCAGCAGAAGCTCCTCCCCATAAGCTATGGGATCCCTCCAACATaGCCCATACATCCCAGAGCT +
Preference number: 4 (lower is better)
Translates to: ITQSNSIGPQQKLLPISYGIPPT*PIHPRA
Trigger: AGCTCTGGGATGTATGGGTCATGTTGGAGGGATCCC...ATAGCTTATGGGGAGGAGCTTCTGCTGAGGACCTATAGAATTAGACTGTGTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613518.1
CDS-3UTR GCA 90 bp TCAACCACTCACATTTTGGCTATGTTAAGTCATAGCTCAACTTGTTCCCTTACTCCAGGTCCTGGCAGGTaGCCCCGTGGGAACAGTTAT +
Preference number: 4 (lower is better)
Translates to: STTHILAMLSHSSTCSLTPGPGR*PRGNSY
Trigger: ATAACTGTTCCCACGGGGGCACCTGCCAGGACCTGG...AGTAAGGGAACAAGTTGAGCTATGACTTAACATAGCCAAAATGTGAGTGGTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR GCA 90 bp TCGAGTATGACACGACAGTTTAAAGAACTACAAGCCCTCAGACTCTACCTAGCGAAGCCATGGCCACTGTaGAGCTGTCAATCACTTCAC +
Preference number: 4 (lower is better)
Translates to: SSMTRQFKELQALRLYLAKPWPL*SCQSLH
Trigger: GTGAAGTGATTGACAGCTGCACAGTGGCCATGGCTT...CGCTAGGTAGAGTCTGAGGGCTTGTAGTTCTTTAAACTGTCGTGTCATACTCGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR GCA 90 bp CAGAAGCACATGGCAAAGCCGGTAGAACTACGTAAGCTCAGAAGAGGCCACACTAATTCACTGCAAATGTaGTCCGTAGTAAGACCTGGT +
Preference number: 4 (lower is better)
Translates to: QKHMAKPVELRKLRRGHTNSLQM*SVVRPG
Trigger: ACCAGGTCTTACTACGGAGCACATTTGCAGTGAATT...AGTGTGGCCTCTTCTGAGCTTACGTAGTTCTACCGGCTTTGCCATGTGCTTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR CCA 90 bp TCAACCACTCACATTTTGGCTATGTTAAGTCATAGCTCAACTTGTTCCCTTACTGGGGCCGGTCCAGCCTaGGGAACACTCACACTCAAA +
Preference number: 4 (lower is better)
Translates to: STTHILAMLSHSSTCSLTGAGPA*GTLTLK
Trigger: TTTGAGTGTGAGTGTTCCCCAGGCTGGACCGGCCCC...AGTAAGGGAACAAGTTGAGCTATGACTTAACATAGCCAAAATGTGAGTGGTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR CCA 90 bp TCGAGTATGACACGACAGTTTAAAGAACTACAAGCCCTCAGACTCTACCTAGCGTTTCCCAGTCCACTGTaGGGGGCACACACACTTAAA +
Preference number: 4 (lower is better)
Translates to: SSMTRQFKELQALRLYLAFPSPL*GAHTLK
Trigger: TTTAAGTGTGTGTGCCCCCCACAGTGGACTGGGAAA...CGCTAGGTAGAGTCTGAGGGCTTGTAGTTCTTTAAACTGTCGTGTCATACTCGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR CCA 90 bp ATGCGGCACTCGATTTCCCAGCCAACCACAGAAACTACCATTGCCAGTGTAAGCGTGGGACACAGACACTaGAATCTGTTGATTTCATTC +
Preference number: 4 (lower is better)
Translates to: MRHSISQPTTETTIASVSVGHRH*NLLISF
Trigger: GAATGAAATCAACAGATTCCAGTGTCTGTGTCCCAC...GCTTACACTGGCAATGGTAGTTTCTGTGGTTGGCTGGGAAATCGAGTGCCGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR CCA 90 bp TTTATTACACAGTCTAATTCTATAGGTCCTCAGCAGAAGCTCCTCCCCATAAGCCTTCAGGTGTGTCGTTaGAAGCCATGGCCACTGTGC +
Preference number: 4 (lower is better)
Translates to: FITQSNSIGPQQKLLPISLQVCR*KPWPLC
Trigger: GCACAGTGGCCATGGCTTCCAACGACACACCTGAAG...GCTTATGGGGAGGAGCTTCTGCTGAGGACCTATAGAATTAGACTGTGTAATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613518.1
CDS-3UTR CCA 90 bp TTTATTACACAGTCTAATTCTATAGGTCCTCAGCAGAAGCTCCTCCCCATAAGCGAGTGGCAGACTCACTaGTTTCACAGTAGGCCCCCT +
Preference number: 4 (lower is better)
Translates to: FITQSNSIGPQQKLLPISEWQTH*FHSRPP
Trigger: AGGGGGCCTACTGTGAAACCAGTGAGTCTGCCACTC...GCTTATGGGGAGGAGCTTCTGCTGAGGACCTATAGAATTAGACTGTGTAATAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000613518.1
CDS-3UTR TCA 90 bp CAGAAGCACATGGCAAAGCCGGTAGAACTACGTAAGCTCAGAAGAGGCCACACTTTCGTAATAGCACTTTaGTTTCCTCACTTAAGGCAG +
Preference number: 4 (lower is better)
Translates to: QKHMAKPVELRKLRRGHTFVIAL*FPHLRQ
Trigger: CTGCCTTAAGTGAGGAAATCAAAGTGCTATTACGAA...AGTGTGGCCTCTTCTGAGCTTACGTAGTTCTACCGGCTTTGCCATGTGCTTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR GCA 90 bp TCGAGTATGACACGACAGTTTAAAGAACTACAAGCCCTCAGACTCTACCTAGCGAGTTTGCAAGACCCATaGTTAGGACTGCAGCCTTGT +
Preference number: 4 (lower is better)
Translates to: SSMTRQFKELQALRLYLASLQDP*LGLQPC
Trigger: ACAAGGCTGCAGTCCTAAGCATGGGTCTTGCAAACT...CGCTAGGTAGAGTCTGAGGGCTTGTAGTTCTTTAAACTGTCGTGTCATACTCGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR GCA 90 bp TCGAGTATGACACGACAGTTTAAAGAACTACAAGCCCTCAGACTCTACCTAGCGCTGAACTCTTACTTCTaGAACGGCAGCAATCAGCGA +
Preference number: 4 (lower is better)
Translates to: SSMTRQFKELQALRLYLALNSYF*NGSNQR
Trigger: TCGCTGATTGCTGCCGTTGCAGAAGTAAGAGTTCAG...CGCTAGGTAGAGTCTGAGGGCTTGTAGTTCTTTAAACTGTCGTGTCATACTCGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR CCA 90 bp ATGCGGCACTCGATTTCCCAGCCAACCACAGAAACTACCATTGCCAGTGTAAGCCGTTTACACAAGGTTTaGCCTCACATTCATTTGCAT +
Preference number: 4 (lower is better)
Translates to: MRHSISQPTTETTIASVSRLHKV*PHIHLH
Trigger: ATGCAAATGAATGTGAGGCCAAACCTTGTGTAAACG...GCTTACACTGGCAATGGTAGTTTCTGTGGTTGGCTGGGAAATCGAGTGCCGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR CCA 90 bp CTCTGTCAGGCAGAGCCTATTATACCCCGATTACCAGAACAGACTCAGCAGGGTGATTCTTACAGGATTTaGCGTTTACACAAGGTTTGG +
Preference number: 4 (lower is better)
Translates to: LCQAEPIIPRLPEQTQQGDSYRI*RLHKVW
Trigger: CCAAACCTTGTGTAAACGCCAAATCCTGTAAGAATC...ACCCTGCTGAGTCTGTTCTGGTAATCGGGGTATAATAGGCTCTGCCTGACAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR CCA 90 bp GTTGTAGCACTGGGCACCGTTCTGGCAGGGATTAGGCTCACAATAATCGATGTCGATTCTTACAGGATTTaGCGTTTACACAAGGTTTGG +
Preference number: 4 (lower is better)
Translates to: VVALGTVLAGIRLTIIDVDSYRI*RLHKVW
Trigger: CCAAACCTTGTGTAAACGCCAAATCCTGTAAGAATC...GACATCGATTATTGTGAGCCTAATCCCTGCCAGAACGGTGCCCAGTGCTACAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622545.1
CDS-3UTR CCA 90 bp ATTACACAGTCTAATTCTATAGGTCCTCAGCAGAAGCTCCTCCCCATAAGCTATGAGCTCCCCAAAGAGTaGCAGACTCACTGGTTTCAC +
Preference number: 4 (lower is better)
Translates to: ITQSNSIGPQQKLLPISYELPKE*QTHWFH
Trigger: GTGAAACCAGTGAGTCTGCCACTCTTTGGGGAGCTC...ATAGCTTATGGGGAGGAGCTTCTGCTGAGGACCTATAGAATTAGACTGTGTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613518.1
CDS-3UTR TCA 90 bp TCGATTTCCCAGCCAACCACAGAAACTACCATTGCCAGTGTAAGCCAGCTTGTCTTGATCATGCCCGAGTaGGAAGCCTTTTCAATAATA +
Preference number: 4 (lower is better)
Translates to: SISQPTTETTIASVSQLVLIMPE*EAFSII
Trigger: TATTATTGAAAAGGCTTCTCACTCGGGCATGATCAA...GACAAGCTGGCTTACACTGGCAATGGTAGTTTCTGTGGTTGGCTGGGAAATCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR TCA 90 bp TTTATTACACAGTCTAATTCTATAGGTCCTCAGCAGAAGCTCCTCCCCATAAGCGTGGTCTTTCAGGTGTaGGCAGTTCTTGCCCTCATA +
Preference number: 4 (lower is better)
Translates to: FITQSNSIGPQQKLLPISVVFQV*AVLALI
Trigger: TATGAGGGCAAGAACTGCTCACACCTGAAAGACCAC...GCTTATGGGGAGGAGCTTCTGCTGAGGACCTATAGAATTAGACTGTGTAATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613518.1
CDS-3UTR TCA 90 bp TTTATTACACAGTCTAATTCTATAGGTCCTCAGCAGAAGCTCCTCCCCATAAGCTGCACTTGTAGGAGTTaGCACCATCGATGCAAGTGC +
Preference number: 4 (lower is better)
Translates to: FITQSNSIGPQQKLLPISCTCRS*HHRCKC
Trigger: GCACTTGCATCGATGGTGTCAACTCCTACAAGTGCA...GCTTATGGGGAGGAGCTTCTGCTGAGGACCTATAGAATTAGACTGTGTAATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613518.1
CDS-3UTR TCA 90 bp TCAACCACTCACATTTTGGCTATGTTAAGTCATAGCTCAACTTGTTCCCTTACTGATGCAAGGTCTCCCTaGAACTTCCTGGCACTTGGC +
Preference number: 4 (lower is better)
Translates to: STTHILAMLSHSSTCSLTDARSP*NFLALG
Trigger: GCCAAGTGCCAGGAAGTTTCAGGGAGACCTTGCATC...AGTAAGGGAACAAGTTGAGCTATGACTTAACATAGCCAAAATGTGAGTGGTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR TCA 90 bp TCGATTTCCCAGCCAACCACAGAAACTACCATTGCCAGTGTAAGCCAGCTTGTCTTTGAGAACTCCAGATaGGTTTTGTGGTTGAAAAGC +
Preference number: 4 (lower is better)
Translates to: SISQPTTETTIASVSQLVFENSR*VLWLKS
Trigger: GCTTTTCAACCACAAAACTCATCTGGAGTTCTCAAA...GACAAGCTGGCTTACACTGGCAATGGTAGTTTCTGTGGTTGGCTGGGAAATCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR GCA 90 bp TCGAGTATGACACGACAGTTTAAAGAACTACAAGCCCTCAGACTCTACCTAGCGCCATGCAAGTTTTGTTaGCATTCTGGTCACAGGCAT +
Preference number: 4 (lower is better)
Translates to: SSMTRQFKELQALRLYLAPCKFC*HSGHRH
Trigger: ATGCCTGTGACCAGAATGGCAACAAAACTTGCATGG...CGCTAGGTAGAGTCTGAGGGCTTGTAGTTCTTTAAACTGTCGTGTCATACTCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR GCA 90 bp TTTATTACACAGTCTAATTCTATAGGTCCTCAGCAGAAGCTCCTCCCCATAAGCAAGCCATGGCCACTGTaGAGCTGTCAATCACTTCAC +
Preference number: 4 (lower is better)
Translates to: FITQSNSIGPQQKLLPISKPWPL*SCQSLH
Trigger: GTGAAGTGATTGACAGCTGCACAGTGGCCATGGCTT...GCTTATGGGGAGGAGCTTCTGCTGAGGACCTATAGAATTAGACTGTGTAATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613518.1
CDS-3UTR GCA 90 bp ATTACACAGTCTAATTCTATAGGTCCTCAGCAGAAGCTCCTCCCCATAAGCTATCACCATCGATGCAAGTaGCACCGTTTCTACAAGGGT +
Preference number: 4 (lower is better)
Translates to: ITQSNSIGPQQKLLPISYHHRCK*HRFYKG
Trigger: ACCCTTGTAGAAACGGTGGCACTTGCATCGATGGTG...ATAGCTTATGGGGAGGAGCTTCTGCTGAGGACCTATAGAATTAGACTGTGTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613518.1
CDS-3UTR CCA 90 bp TCGAGTATGACACGACAGTTTAAAGAACTACAAGCCCTCAGACTCTACCTAGCGTGGAGCATGCACGACTaGAAAACAACACCACTTTTC +
Preference number: 4 (lower is better)
Translates to: SSMTRQFKELQALRLYLAWSMHD*KTTPLF
Trigger: GAAAAGTGGTGTTGTTTTCCAGTCGTGCATGCTCCA...CGCTAGGTAGAGTCTGAGGGCTTGTAGTTCTTTAAACTGTCGTGTCATACTCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR CCA 90 bp TCGAGTATGACACGACAGTTTAAAGAACTACAAGCCCTCAGACTCTACCTAGCGTTGTGGCAGGGGTTCTaGCTGCAGTCATTAATATTG +
Preference number: 4 (lower is better)
Translates to: SSMTRQFKELQALRLYLALWQGF*LQSLIL
Trigger: CAATATTAATGACTGCAGCCAGAACCCCTGCCACAA...CGCTAGGTAGAGTCTGAGGGCTTGTAGTTCTTTAAACTGTCGTGTCATACTCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR CCA 90 bp TCAACCACTCACATTTTGGCTATGTTAAGTCATAGCTCAACTTGTTCCCTTACTCTCCCTGAAACTTCCTaGCACTTGGCACCACTGTGC +
Preference number: 4 (lower is better)
Translates to: STTHILAMLSHSSTCSLTLPETS*HLAPLC
Trigger: GCACAGTGGTGCCAAGTGCCAGGAAGTTTCAGGGAG...AGTAAGGGAACAAGTTGAGCTATGACTTAACATAGCCAAAATGTGAGTGGTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR CCA 90 bp TCGAGTATGACACGACAGTTTAAAGAACTACAAGCCCTCAGACTCTACCTAGCGATTCGGTTTAAGCTCTaGGCACTTTCCAAGTCTCTG +
Preference number: 4 (lower is better)
Translates to: SSMTRQFKELQALRLYLAIRFKL*ALSKSL
Trigger: CAGAGACTTGGAAAGTGCCCAGAGCTTAAACCGAAT...CGCTAGGTAGAGTCTGAGGGCTTGTAGTTCTTTAAACTGTCGTGTCATACTCGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR CCA 90 bp TTTATTACACAGTCTAATTCTATAGGTCCTCAGCAGAAGCTCCTCCCCATAAGCTTTCCCACGTTGAAGTaGGATCCCTCCAACATGACC +
Preference number: 4 (lower is better)
Translates to: FITQSNSIGPQQKLLPISFPTLK*DPSNMT
Trigger: GGTCATGTTGGAGGGATCCCACTTCAACGTGGGAAA...GCTTATGGGGAGGAGCTTCTGCTGAGGACCTATAGAATTAGACTGTGTAATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613518.1
CDS-3UTR GCA 90 bp TCAACCACTCACATTTTGGCTATGTTAAGTCATAGCTCAACTTGTTCCCTTACTGCAAACCGGGCTTTCTaGTGGTGTTTGTCCATGTCG +
Preference number: 4 (lower is better)
Translates to: STTHILAMLSHSSTCSLTANRAF*WCLSMS
Trigger: CGACATGGACAAACACCAGCAGAAAGCCCGGTTTGC...AGTAAGGGAACAAGTTGAGCTATGACTTAACATAGCCAAAATGTGAGTGGTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR GCA 90 bp CCATCCCTCTGTCAGGCAGAGCCTATTATACCCCGATTACCAGAACAGACTCAGAAAGTAAGATTGGTGTaGTTCCAAGTTCACACAATT +
Preference number: 4 (lower is better)
Translates to: PSLCQAEPIIPRLPEQTQKVRLV*FQVHTI
Trigger: AATTGTGTGAACTTGGAAGCACACCAATCTTACTTT...CTGAGTCTGTTCTGGTAATCGGGGTATAATAGGCTCTGCCTGACAGAGGGATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR GCA 90 bp ATTACACAGTCTAATTCTATAGGTCCTCAGCAGAAGCTCCTCCCCATAAGCTATCAGTGCAGAAATCACTaGGGTCTTGCTTCCAGAGAT +
Preference number: 4 (lower is better)
Translates to: ITQSNSIGPQQKLLPISYQCRNH*GLASRD
Trigger: ATCTCTGGAAGCAAGACCGCAGTGATTTCTGCACTG...ATAGCTTATGGGGAGGAGCTTCTGCTGAGGACCTATAGAATTAGACTGTGTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613518.1
CDS-3UTR CCA 90 bp ATATTTATTACACAGTCTAATTCTATAGGTCCTCAGCAGAAGCTCCTCCCCATATGTCGTTGGAAGCCATaGCCACTGTGCAGCTGTCAA +
Preference number: 4 (lower is better)
Translates to: IFITQSNSIGPQQKLLPICRWKP*PLCSCQ
Trigger: TTGACAGCTGCACAGTGGCCATGGCTTCCAACGACA...TATGGGGAGGAGCTTCTGCTGAGGACCTATAGAATTAGACTGTGTAATAAATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613518.1
CDS-3UTR CCA 90 bp ATATTTATTACACAGTCTAATTCTATAGGTCCTCAGCAGAAGCTCCTCCCCATAGAGGACCACAGACGTTaGAGGAAATATACCGCACCC +
Preference number: 4 (lower is better)
Translates to: IFITQSNSIGPQQKLLPIEDHRR*RKYTAP
Trigger: GGGTGCGGTATATTTCCTCCAACGTCTGTGGTCCTC...TATGGGGAGGAGCTTCTGCTGAGGACCTATAGAATTAGACTGTGTAATAAATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613518.1
CDS-3UTR CCA 90 bp TCAACCACTCACATTTTGGCTATGTTAAGTCATAGCTCAACTTGTTCCCTTACTCATTATGGCAGGGGTTaGGCAGGCAGCTACTGTTTC +
Preference number: 4 (lower is better)
Translates to: STTHILAMLSHSSTCSLTHYGRG*AGSYCF
Trigger: GAAACAGTAGCTGCCTGCCCAACCCCTGCCATAATG...AGTAAGGGAACAAGTTGAGCTATGACTTAACATAGCCAAAATGTGAGTGGTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR CCA 90 bp TCAACCACTCACATTTTGGCTATGTTAAGTCATAGCTCAACTTGTTCCCTTACTTTTGTCTTCACCGGCTaGAGACTGGAAGACCGACAC +
Preference number: 4 (lower is better)
Translates to: STTHILAMLSHSSTCSLTFVFTG*RLEDRH
Trigger: GTGTCGGTCTTCCAGTCTCCAGCCGGTGAAGACAAA...AGTAAGGGAACAAGTTGAGCTATGACTTAACATAGCCAAAATGTGAGTGGTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR TCA 90 bp ATATTTATTACACAGTCTAATTCTATAGGTCCTCAGCAGAAGCTCCTCCCCATATGTTACAGTCACAGGTaGATTTGCCTCCCGACTGAC +
Preference number: 4 (lower is better)
Translates to: IFITQSNSIGPQQKLLPICYSHR*ICLPTD
Trigger: GTCAGTCGGGAGGCAAATTCACCTGTGACTGTAACA...TATGGGGAGGAGCTTCTGCTGAGGACCTATAGAATTAGACTGTGTAATAAATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613518.1
CDS-3UTR TCA 90 bp TCAACCACTCACATTTTGGCTATGTTAAGTCATAGCTCAACTTGTTCCCTTACTTGCACTTGTAGGAGTTaGCACCATCGATGCAAGTGC +
Preference number: 4 (lower is better)
Translates to: STTHILAMLSHSSTCSLTCTCRS*HHRCKC
Trigger: GCACTTGCATCGATGGTGTCAACTCCTACAAGTGCA...AGTAAGGGAACAAGTTGAGCTATGACTTAACATAGCCAAAATGTGAGTGGTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR TCA 90 bp TCAACCACTCACATTTTGGCTATGTTAAGTCATAGCTCAACTTGTTCCCTTACTTCTCAATGGGGTTTTTaGTCTGGTTCAGCTGCTCCC +
Preference number: 4 (lower is better)
Translates to: STTHILAMLSHSSTCSLTSQWGF*SGSAAP
Trigger: GGGAGCAGCTGAACCAGATCAAAAACCCCATTGAGA...AGTAAGGGAACAAGTTGAGCTATGACTTAACATAGCCAAAATGTGAGTGGTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR GCA 90 bp TCAACCACTCACATTTTGGCTATGTTAAGTCATAGCTCAACTTGTTCCCTTACTTCAGAGAGGCAGGCGTaGTCAGCAATTTCACAGTTG +
Preference number: 4 (lower is better)
Translates to: STTHILAMLSHSSTCSLTSERQA*SAISQL
Trigger: CAACTGTGAAATTGCTGAGCACGCCTGCCTCTCTGA...AGTAAGGGAACAAGTTGAGCTATGACTTAACATAGCCAAAATGTGAGTGGTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR GCA 90 bp TCAACCACTCACATTTTGGCTATGTTAAGTCATAGCTCAACTTGTTCCCTTACTCACCATCGATGCAAGTaGCACCGTTTCTACAAGGGT +
Preference number: 4 (lower is better)
Translates to: STTHILAMLSHSSTCSLTHHRCK*HRFYKG
Trigger: ACCCTTGTAGAAACGGTGGCACTTGCATCGATGGTG...AGTAAGGGAACAAGTTGAGCTATGACTTAACATAGCCAAAATGTGAGTGGTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR GCA 90 bp TCGATTTCCCAGCCAACCACAGAAACTACCATTGCCAGTGTAAGCCAGCTTGTCGCCATACGCTTACAATaGTATCAAAAACCTTCAATT +
Preference number: 4 (lower is better)
Translates to: SISQPTTETTIASVSQLVAIRLQ*YQKPSI
Trigger: AATTGAAGGTTTTTGATAGCATTGTAAGCGTATGGC...GACAAGCTGGCTTACACTGGCAATGGTAGTTTCTGTGGTTGGCTGGGAAATCGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR CCA 90 bp TCGATTTCCCAGCCAACCACAGAAACTACCATTGCCAGTGTAAGCCAGCTTGTCTATCTTCAGCAGAAATaGCCACATGTATTTCATTGT +
Preference number: 4 (lower is better)
Translates to: SISQPTTETTIASVSQLVYLQQK*PHVFHC
Trigger: ACAATGAAATACATGTGGCCATTTCTGCTGAAGATA...GACAAGCTGGCTTACACTGGCAATGGTAGTTTCTGTGGTTGGCTGGGAAATCGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR TCA 90 bp ATATTTATTACACAGTCTAATTCTATAGGTCCTCAGCAGAAGCTCCTCCCCATAAAAGTTTTCCCACGTTaGAGTGGGATCCCTCCAACA +
Preference number: 4 (lower is better)
Translates to: IFITQSNSIGPQQKLLPIKVFPR*SGIPPT
Trigger: TGTTGGAGGGATCCCACTTCAACGTGGGAAAACTTT...TATGGGGAGGAGCTTCTGCTGAGGACCTATAGAATTAGACTGTGTAATAAATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000613518.1
CDS-3UTR GCA 90 bp ATTACACAGTCTAATTCTATAGGTCCTCAGCAGAAGCTCCTCCCCATAAGCTATAAATCACTGCGGTCTTaGTTCCAGAGATTTCCAGTA +
Preference number: 4 (lower is better)
Translates to: ITQSNSIGPQQKLLPISYKSLRS*FQRFPV
Trigger: TACTGGAAATCTCTGGAAGCAAGACCGCAGTGATTT...ATAGCTTATGGGGAGGAGCTTCTGCTGAGGACCTATAGAATTAGACTGTGTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613518.1
CDS-3UTR GCA 90 bp ATATTTATTACACAGTCTAATTCTATAGGTCCTCAGCAGAAGCTCCTCCCCATAGTGATACTGTCCCAGTaGAGAAATCACTGCGGTCTT +
Preference number: 4 (lower is better)
Translates to: IFITQSNSIGPQQKLLPIVILSQ*RNHCGL
Trigger: AAGACCGCAGTGATTTCTGCACTGGGACAGTATCAC...TATGGGGAGGAGCTTCTGCTGAGGACCTATAGAATTAGACTGTGTAATAAATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613518.1
CDS-3UTR CCA 90 bp TCAACCACTCACATTTTGGCTATGTTAAGTCATAGCTCAACTTGTTCCCTTACTCGTCCATTCAGGCACTaGCAGGTATTACAGTCATCA +
Preference number: 4 (lower is better)
Translates to: STTHILAMLSHSSTCSLTRPFRH*QVLQSS
Trigger: TGATGACTGTAATACCTGCCAGTGCCTGAATGGACG...AGTAAGGGAACAAGTTGAGCTATGACTTAACATAGCCAAAATGTGAGTGGTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR TCA 90 bp ATATTTATTACACAGTCTAATTCTATAGGTCCTCAGCAGAAGCTCCTCCCCATACAAATGAGACACAAGTaGTACTGTCCCAGTGCAGAA +
Preference number: 4 (lower is better)
Translates to: IFITQSNSIGPQQKLLPIQMRHK*YCPSAE
Trigger: TTCTGCACTGGGACAGTATCACTTGTGTCTCATTTG...TATGGGGAGGAGCTTCTGCTGAGGACCTATAGAATTAGACTGTGTAATAAATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613518.1
3UTR CAA 72 bp TTAATCCAGTGGTGTTTATTCAAGCAGTATTCACACTaGCTGTTGAATAACAAGGGAATCAAGGCTCCCCTA +
Preference number: 4 (lower is better)
Translates to: LIQWCLFKQYSH*LLNNKGIKAPL
Trigger: TAGGGGAGCCTTGATTCCCTTGTTATTCAACAGCAAGTGTGAATACTGCTTGAATAAACACCACTGGATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR TCA 90 bp TCAACCACTCACATTTTGGCTATGTTAAGTCATAGCTCAACTTGTTCCCTTACTGCAAGCGATGTAGATTaGATATTCAGCGGAAACATT +
Preference number: 4 (lower is better)
Translates to: STTHILAMLSHSSTCSLTASDVD*IFSGNI
Trigger: AATGTTTCCGCTGAATATTCAATCTACATCGCTTGC...AGTAAGGGAACAAGTTGAGCTATGACTTAACATAGCCAAAATGTGAGTGGTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254958.10
3UTR CAA 72 bp ATAAGCCTTTTTGATCTTGAACTTCGTAATAGCACTTaGATTTCCTCACTTAAGGCAGGCAGTGTACTCTAT +
Preference number: 4 (lower is better)
Translates to: ISLFDLELRNST*ISSLKAGSVLY
Trigger: ATAGAGTACACTGCCTGCCTTAAGTGAGGAAATCAAAGTGCTATTACGAAGTTCAAGATCAAAAAGGCTTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000254958.10
3UTR CAA 72 bp TCTGAGCTGCAAAGGCACTTTCAAATACAGAACTACTaGTACGTCATCATAAAACCAATATACAAAAACAAC +
Preference number: 4 (lower is better)
Translates to: SELQRHFQIQNY*YVIIKPIYKNN
Trigger: GTTGTTTTTGTATATTGGTTTTATGATGACGTACAAGTAGTTCTGTATTTGAAAGTGCCTTTGCAGCTCAGA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS CCA 90 bp GGACGAAGCACTGGTCGTCCAGGATGGGGATGCAGCTCTGCCCGCTaGGGCACTCGCTGTGCCCTTTGTGGAGCAGGCAAGGTCGAGGGC +
Preference number: 5 (lower is better)
Translates to: GRSTGRPGWGCSSAR*GTRCALCGAGKVEG
Trigger: GCCCTCGACCTTGCCTGCTCCACAAAGGGCACAGCGAGTGCCCCAGCGGGCAGAGCTGCATCCCCATCCTGGACGACCAGTGCTTCGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254958.10
ENST00000423891.6
ENST00000617965.2
CDS CCA 90 bp ATGGGGATGCAGCTCTGCCCGCTGGGGCACTCGCTGTGCCCTTTGTaGAGCAGGCAAGGTCGAGGGCCACACCAGACCTTTGAGCAGGCG +
Preference number: 5 (lower is better)
Translates to: MGMQLCPLGHSLCPL*SRQGRGPHQTFEQA
Trigger: CGCCTGCTCAAAGGTCTGGTGTGGCCCTCGACCTTGCCTGCTCCACAAAGGGCACAGCGAGTGCCCCAGCGGGCAGAGCTGCATCCCCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254958.10
ENST00000423891.6
ENST00000617965.2
CDS GCA 90 bp TCGTCCAGGATGGGGATGCAGCTCTGCCCGCTGGGGCACTCGCTGTaGCCTTTGTGGAGCAGGCAAGGTCGAGGGCCACACCAGACCTTT +
Preference number: 5 (lower is better)
Translates to: SSRMGMQLCPLGHSL*PLWSRQGRGPHQTF
Trigger: AAAGGTCTGGTGTGGCCCTCGACCTTGCCTGCTCCACAAAGGGCACAGCGAGTGCCCCAGCGGGCAGAGCTGCATCCCCATCCTGGACGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254958.10
ENST00000423891.6
ENST00000617965.2
CDS GCA 90 bp TCTTCACCGGCTGGAGACTGGAAGACCGACACTCGCCCACACCAGTaGAGGGGTGGACGAAGCACTGGTCGTCCAGGATGGGGATGCAGC +
Preference number: 5 (lower is better)
Translates to: SSPAGDWKTDTRPHQ*RGGRSTGRPGWGCS
Trigger: GCTGCATCCCCATCCTGGACGACCAGTGCTTCGTCCACCCCTGCACTGGTGTGGGCGAGTGTCGGTCTTCCAGTCTCCAGCCGGTGAAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254958.10
ENST00000423891.6
CDS GCA 90 bp GCACGTTGTTGGTGGTGTTGTCCTCAGAGGCTGAGTGTGTGTGGCTaGCCGGCTTCCGCCGCTTCCGCAGGCACCAGTAGAAGGCCGTCA +
Preference number: 5 (lower is better)
Translates to: ARCWWCCPQRLSVCG*PASAASAGTSRRPS
Trigger: TGACGGCCTTCTACTGGTGCCTGCGGAAGCGGCGGAAGCCGGGCAGCCACACACACTCAGCCTCTGAGGACAACACCACCAACAACGTGC
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254958.10
ENST00000423891.6
CDS CCA 90 bp CTACTGTGCCATTTAAAGAGGGCCCGGGGAGCTTCTGTGGCCTGCTaGAGTTCCGCAAGTGACAGGTGGGGGCCTAGGACCAGCACAGGC +
Preference number: 5 (lower is better)
Translates to: LLCHLKRARGASVAC*SSASDRWGPRTSTG
Trigger: GCCTGTGCTGGTCCTAGGCCCCCACCTGTCACTTGCGGAACTCCAGCAGGCCACAGAAGCTCCCCGGGCCCTCTTTAAATGGCACAGTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000617965.2
CDS-3UTR CAA 90 bp CCTCTGTCAGGCAGAGCCTATTATACCCCGATTACCAGAACAGACTCAGCAGGGGGCAGCACGATGCGGTaGCGGTCGTTGCCGCGGCTG +
Preference number: 5 (lower is better)
Translates to: PLSGRAYYTPITRTDSAGGSTMR*RSLPRL
Trigger: CAGCCGCGGCAACGACCGCAACCGCATCGTGCTGCC...CCCTGCTGAGTCTGTTCTGGTAATCGGGGTATAATAGGCTCTGCCTGACAGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS GCA 90 bp TGGACGCATCCCGGGTGTGGGATGCACTTATCACAGTACAGGCCTTaGCAGCCGTACTGGCACCTGGAGACACACAGCACACCTCCAGGT +
Preference number: 5 (lower is better)
Translates to: WTHPGCGMHLSQYRP*QPYWHLETHSTPPG
Trigger: ACCTGGAGGTGTGCTGTGTGTCTCCAGGTGCCAGTACGGCTGGCAAGGCCTGTACTGTGATAAGTGCATCCCACACCCGGGATGCGTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617965.2
CDS GCA 90 bp AGGATGGGGGTGCTGGGAGACTTCCAAACACACAAGCCACCAGACTaGTTACCAGACTTAGGCCTGCACCCGCCCCTCTCTCACCGAGAC +
Preference number: 5 (lower is better)
Translates to: RMGVLGDFQTHKPPD*LPDLGLHPPLSHRD
Trigger: GTCTCGGTGAGAGAGGGGCGGGTGCAGGCCTAAGTCTGGTAAGCAGTCTGGTGGCTTGTGTGTTTGGAAGTCTCCCAGCACCCCCATCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000617965.2
CDS CCA 90 bp TCACAGCCATGCACCCACAGATGCGGCATTCCTAAGCCAAGGGCCTaGGCCAAGCCCACTTTCCTGGAGACAGGGACCCTCTGGCTAATG +
Preference number: 5 (lower is better)
Translates to: SQPCTHRCGIPKPRA*AKPTFLETGTLWLM
Trigger: CATTAGCCAGAGGGTCCCTGTCTCCAGGAAAGTGGGCTTGGCCCAGGCCCTTGGCTTAGGAATGCCGCATCTGTGGGTGCATGGCTGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612857.1
CDS-3UTR CAA 90 bp CTCTGTCAGGCAGAGCCTATTATACCCCGATTACCAGAACAGACTCAGCAGGGTTCGTCGCGGGTGCACTaGCGGTCTCCCGGGTTCCGG +
Preference number: 5 (lower is better)
Translates to: LCQAEPIIPRLPEQTQQGSSRVH*RSPGFR
Trigger: CCGGAACCCGGGAGACCGCAAGTGCACCCGCGACGA...ACCCTGCTGAGTCTGTTCTGGTAATCGGGGTATAATAGGCTCTGCCTGACAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS CCA 90 bp GGTAATAGGAGTCAGAGGTGCACTTTGTCTTCACCGGCTGGAGACTaGAAGACCGACACTCGCCCACACCAGTGCAGGGGTGGACGAAGC +
Preference number: 5 (lower is better)
Translates to: GNRSQRCTLSSPAGD*KTDTRPHQCRGGRS
Trigger: GCTTCGTCCACCCCTGCACTGGTGTGGGCGAGTGTCGGTCTTCCAGTCTCCAGCCGGTGAAGACAAAGTGCACCTCTGACTCCTATTACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254958.10
ENST00000423891.6
CDS CCA 90 bp GGATCCCTCCAACATGACCCATACATCCCAGAGCTCCCCAAAGAGTaGCAGACTCACTGGTTTCACAGTAGGCCCCCTCCCAGCCGTCAC +
Preference number: 5 (lower is better)
Translates to: GSLQHDPYIPELPKE*QTHWFHSRPPPSRH
Trigger: GTGACGGCTGGGAGGGGGCCTACTGTGAAACCAGTGAGTCTGCCACTCTTTGGGGAGCTCTGGGATGTATGGGTCATGTTGGAGGGATCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000613518.1
CDS-3UTR CAA 90 bp ATGCGGCACTCGATTTCCCAGCCAACCACAGAAACTACCATTGCCAGTGTAAGCATGCGGTTGCGGTCGTaGCCGCGGCTGGCCTTGAGG +
Preference number: 5 (lower is better)
Translates to: MRHSISQPTTETTIASVSMRLRS*PRLALR
Trigger: CCTCAAGGCCAGCCGCGGCAACGACCGCAACCGCAT...GCTTACACTGGCAATGGTAGTTTCTGTGGTTGGCTGGGAAATCGAGTGCCGCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR CAA 90 bp CACAGGGGGTCGTGCGGCAGTGGTCTTTCAGGTGTGAGCAGTTCTTGCCCTCATCCTTCAGGTGTGTCGTaGGAAGCCATGGCCACTGTG +
Preference number: 5 (lower is better)
Translates to: HRGSCGSGLSGVSSSCPHPSGVS*EAMATV
Trigger: CACAGTGGCCATGGCTTCCAACGACACACCTGAAGG...ATGAGGGCAAGAACTGCTCACACCTGAAAGACCACTGCCGCACGACCCCCTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000622545.1
CDS GCA 90 bp CTGGGGAACACTCACACTCAAAGCCCAGGGAGGTCTCCTTACAGCTaGCTCTGTTGTGACAGGGATCAGAGAGGCAGGCGTGCTCAGCAA +
Preference number: 5 (lower is better)
Translates to: LGNTHTQSPGRSPYS*LCCDRDQRGRRAQQ
Trigger: TTGCTGAGCACGCCTGCCTCTCTGATCCCTGTCACAACAGAGGCAGCTGTAAGGAGACCTCCCTGGGCTTTGAGTGTGAGTGTTCCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254958.10
ENST00000423891.6
ENST00000617965.2
CDS CCA 90 bp TGGAGGAAATATACCGCACCCCTTCAGGTGTGTCGTTGGAAGCCATaGCCACTGTGCAGCTGTCAATCACTTCACAGGGGGTCGTGCGGC +
Preference number: 5 (lower is better)
Translates to: WRKYTAPLQVCRWKP*PLCSCQSLHRGSCG
Trigger: GCCGCACGACCCCCTGTGAAGTGATTGACAGCTGCACAGTGGCCATGGCTTCCAACGACACACCTGAAGGGGTGCGGTATATTTCCTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254958.10
ENST00000423891.6
ENST00000613518.1
ENST00000617965.2
CDS CCA 90 bp GCTACCTGGAAATGCAGACAACTGTGGGTAGCTCTGGACAAGCCCTaGGTTCCCAGGGGACATAACTCCCTGACCTGCGAGGTGACAGGA +
Preference number: 5 (lower is better)
Translates to: ATWKCRQLWVALDKP*VPRGHNSLTCEVTG
Trigger: TCCTGTCACCTCGCAGGTCAGGGAGTTATGTCCCCTGGGAACCCAGGGCTTGTCCAGAGCTACCCACAGTTGTCTGCATTTCCAGGTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423891.6
CDS-3UTR CAA 90 bp ATGCGGCACTCGATTTCCCAGCCAACCACAGAAACTACCATTGCCAGTGTAAGCCGACACGTGCCCCCATaGTGGCAGGGGTTCTGGCTG +
Preference number: 5 (lower is better)
Translates to: MRHSISQPTTETTIASVSRHVPP*WQGFWL
Trigger: CAGCCAGAACCCCTGCCACAATGGGGGCACGTGTCG...GCTTACACTGGCAATGGTAGTTTCTGTGGTTGGCTGGGAAATCGAGTGCCGCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS GCA 90 bp CTACAAGCCCTCAGACTCTACCTAGCGGCGGCAGTGCCCGCGGTCTaGTATACGATGTACTCCATTCGGTTTAAGCTCTGGGCACTTTCC +
Preference number: 5 (lower is better)
Translates to: LQALRLYLAAAVPAV*YTMYSIRFKLWALS
Trigger: GGAAAGTGCCCAGAGCTTAAACCGAATGGAGTACATCGTATAGCAGACCGCGGGCACTGCCGCCGCTAGGTAGAGTCTGAGGGCTTGTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS GCA 90 bp GTAAGCTCAGAAGAGGCCACACTAGCGGCGGCAGTGCCCGCGGTCTaGTATACGATGTACTCCATTCGGTTTAAGCTCTGGGCACTTTCC +
Preference number: 5 (lower is better)
Translates to: VSSEEATLAAAVPAV*YTMYSIRFKLWALS
Trigger: GGAAAGTGCCCAGAGCTTAAACCGAATGGAGTACATCGTATAGCAGACCGCGGGCACTGCCGCCGCTAGTGTGGCCTCTTCTGAGCTTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423891.6
CDS CCA 90 bp TGCCTCCCGACTGACTCTTGCACTTCCCGTGAGGACCACAGACGTTaGAGGAAATATACCGCACCCCTTCAGGTGTGTCGTTGGAAGCCA +
Preference number: 5 (lower is better)
Translates to: CLPTDSCTSREDHRR*RKYTAPLQVCRWKP
Trigger: TGGCTTCCAACGACACACCTGAAGGGGTGCGGTATATTTCCTCCAACGTCTGTGGTCCTCACGGGAAGTGCAAGAGTCAGTCGGGAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254958.10
ENST00000423891.6
ENST00000612857.1
ENST00000613518.1
ENST00000617965.2
CDS CCA 90 bp TGTCCTGTTTGTTTGTCCAGTTTGGGTGTTTTGTCGGCGTGCCGTTaGGGGGCTTCTCTTCTCTGTCTACCAGCGTGTACGCCGGCTGCT +
Preference number: 5 (lower is better)
Translates to: CPVCLSSLGVLSACR*GASLLCLPACTPAA
Trigger: AGCAGCCGGCGTACACGCTGGTAGACAGAGAAGAGAAGCCCCCCAACGGCACGCCGACAAAACACCCAAACTGGACAAACAAACAGGACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254958.10
ENST00000423891.6
CDS CCA 90 bp CATGACCCATACATCCCAGAGCTCCCCAAAGAGTGGCAGACTCACTaGTTTCACAGTAGGCCCCCTCCCAGCCGTCACTACAGATGCACT +
Preference number: 5 (lower is better)
Translates to: HDPYIPELPKEWQTH*FHSRPPPSRHYRCT
Trigger: AGTGCATCTGTAGTGACGGCTGGGAGGGGGCCTACTGTGAAACCAGTGAGTCTGCCACTCTTTGGGGAGCTCTGGGATGTATGGGTCATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000613518.1
CDS-3UTR CAA 90 bp CAGAAGCACATGGCAAAGCCGGTAGAACTACGTAAGCTCAGAAGAGGCCACACTCGGCTGGCCTTGAGGTaGAAGGTGTTGCCCCCGATG +
Preference number: 5 (lower is better)
Translates to: QKHMAKPVELRKLRRGHTRLALR*KVLPPM
Trigger: CATCGGGGGCAACACCTTCAACCTCAAGGCCAGCCG...AGTGTGGCCTCTTCTGAGCTTACGTAGTTCTACCGGCTTTGCCATGTGCTTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR CAA 90 bp CCTCTGTCAGGCAGAGCCTATTATACCCCGATTACCAGAACAGACTCAGCAGGGTCCAGTTTGGGTGTTTaGTCGGCGTGCCGTTGGGGG +
Preference number: 5 (lower is better)
Translates to: PLSGRAYYTPITRTDSAGSSLGV*SACRWG
Trigger: CCCCCAACGGCACGCCGACAAAACACCCAAACTGGA...CCCTGCTGAGTCTGTTCTGGTAATCGGGGTATAATAGGCTCTGCCTGACAGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS GCA 90 bp CAGGTGATTCTGATATACAGCCCTGTCTCACAGCCAAAGGAACTCTaGAGGCCAGGTTCTTCTCTGGGGCCCCCTGGCCCTATGACAGAA +
Preference number: 5 (lower is better)
Translates to: QVILIYSPVSQPKEL*RPGSSLGPPGPMTE
Trigger: TTCTGTCATAGGGCCAGGGGGCCCCAGAGAAGAACCTGGCCTGCAGAGTTCCTTTGGCTGTGAGACAGGGCTGTATATCAGAATCACCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000617965.2
CDS CCA 90 bp CACAGACGTTGGAGGAAATATACCGCACCCCTTCAGGTGTGTCGTTaGAAGCCATGGCCACTGTGCAGCTGTCAATCACTTCACAGGGGG +
Preference number: 5 (lower is better)
Translates to: HRRWRKYTAPLQVCR*KPWPLCSCQSLHRG
Trigger: CCCCCTGTGAAGTGATTGACAGCTGCACAGTGGCCATGGCTTCCAACGACACACCTGAAGGGGTGCGGTATATTTCCTCCAACGTCTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254958.10
ENST00000423891.6
ENST00000613518.1
ENST00000617965.2
CDS CCA 90 bp GGGCCACACCAGACCTTTGAGCAGGCGATCCGTCCATTCAGGCACTaGCAGGTATTACAGTCATCATCCCATTTGGCCCCATCTGGTATC +
Preference number: 5 (lower is better)
Translates to: GPHQTFEQAIRPFRH*QVLQSSSHLAPSGI
Trigger: GATACCAGATGGGGCCAAATGGGATGATGACTGTAATACCTGCCAGTGCCTGAATGGACGGATCGCCTGCTCAAAGGTCTGGTGTGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254958.10
ENST00000423891.6
ENST00000617965.2
CDS CCA 90 bp CGAGGTGACAGGAGGTCCAGGAAAGGTGCTGTGAATGCTGCAGTGTaGCGGGGAGGTCTCTCACATGTCCCTAACAAGTATACTGACCTG +
Preference number: 5 (lower is better)
Translates to: RGDRRSRKGAVNAAV*RGGLSHVPNKYTDL
Trigger: CAGGTCAGTATACTTGTTAGGGACATGTGAGAGACCTCCCCGCCACACTGCAGCATTCACAGCACCTTTCCTGGACCTCCTGTCACCTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423891.6
CDS-3UTR CAA 90 bp TCGATTTCCCAGCCAACCACAGAAACTACCATTGCCAGTGTAAGCCAGCTTGTCTTGCCGCGGCTGGCCTaGAGGTTGAAGGTGTTGCCC +
Preference number: 5 (lower is better)
Translates to: SISQPTTETTIASVSQLVLPRLA*RLKVLP
Trigger: GGGCAACACCTTCAACCTCAAGGCCAGCCGCGGCAA...GACAAGCTGGCTTACACTGGCAATGGTAGTTTCTGTGGTTGGCTGGGAAATCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR CAA 90 bp TCAGGCAGAGCCTATTATACCCCGATTACCAGAACAGACTCAGCAGGGTGGCAGATCACAGTACAGGCCTaGCCAGCCGTACTGGCACCT +
Preference number: 5 (lower is better)
Translates to: SGRAYYTPITRTDSAGWQITVQA*PAVLAP
Trigger: AGGTGCCAGTACGGCTGGCAAGGCCTGTACTGTGAT...CTGCCACCCTGCTGAGTCTGTTCTGGTAATCGGGGTATAATAGGCTCTGCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR CAA 90 bp CCTCTGTCAGGCAGAGCCTATTATACCCCGATTACCAGAACAGACTCAGCAGGGGGGCTATGTTACAGGTaGTTCCTTCCCAGCCGCCAG +
Preference number: 5 (lower is better)
Translates to: PLSGRAYYTPITRTDSAGGLCYR*FLPSRQ
Trigger: CTGGCGGCTGGGAAGGAACAACCTGTAACATAGCCC...CCCTGCTGAGTCTGTTCTGGTAATCGGGGTATAATAGGCTCTGCCTGACAGAGG
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR CAA 90 bp CAGAAGCACATGGCAAAGCCGGTAGAACTACGTAAGCTCAGAAGAGGCCACACTGGCCACACCAGACCTTaGAGCAGGCGATCCGTCCAT +
Preference number: 5 (lower is better)
Translates to: QKHMAKPVELRKLRRGHTGHTRP*SRRSVH
Trigger: ATGGACGGATCGCCTGCTCAAAGGTCTGGTGTGGCC...AGTGTGGCCTCTTCTGAGCTTACGTAGTTCTACCGGCTTTGCCATGTGCTTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR CAA 90 bp CTCTGTCAGGCAGAGCCTATTATACCCCGATTACCAGAACAGACTCAGCAGGGTCACTCGCTGTGCCCTTaGTGGAGCAGGCAAGGTCGA +
Preference number: 5 (lower is better)
Translates to: LCQAEPIIPRLPEQTQQGHSLCP*WSRQGR
Trigger: TCGACCTTGCCTGCTCCACAAAGGGCACAGCGAGTG...ACCCTGCTGAGTCTGTTCTGGTAATCGGGGTATAATAGGCTCTGCCTGACAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR CAA 90 bp CCTCTGTCAGGCAGAGCCTATTATACCCCGATTACCAGAACAGACTCAGCAGGGAGCTGCTCCCGCACGTaGTTGGTGGTGTTGTCCTCA +
Preference number: 5 (lower is better)
Translates to: PLSGRAYYTPITRTDSAGSCSRT*LVVLSS
Trigger: TGAGGACAACACCACCAACAACGTGCGGGAGCAGCT...CCCTGCTGAGTCTGTTCTGGTAATCGGGGTATAATAGGCTCTGCCTGACAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS TCA 90 bp TCACACTCAAAGCCCAGGGAGGTCTCCTTACAGCTGCCTCTGTTGTaGCAGGGATCAGAGAGGCAGGCGTGCTCAGCAATTTCACAGTTG +
Preference number: 5 (lower is better)
Translates to: SHSKPREVSLQLPLL*QGSERQACSAISQL
Trigger: CAACTGTGAAATTGCTGAGCACGCCTGCCTCTCTGATCCCTGTCACAACAGAGGCAGCTGTAAGGAGACCTCCCTGGGCTTTGAGTGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254958.10
ENST00000423891.6
ENST00000617965.2
CDS TCA 90 bp AGTAGGCCCCCTCCCAGCCGTCACTACAGATGCACTTGTAGGAGTTaGCACCATCGATGCAAGTGCCACCGTTTCTACAAGGGTTGCTCT +
Preference number: 5 (lower is better)
Translates to: SRPPPSRHYRCTCRS*HHRCKCHRFYKGCS
Trigger: AGAGCAACCCTTGTAGAAACGGTGGCACTTGCATCGATGGTGTCAACTCCTACAAGTGCATCTGTAGTGACGGCTGGGAGGGGGCCTACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000254958.10
ENST00000423891.6
ENST00000488480.2
ENST00000612857.1
ENST00000613518.1
ENST00000617965.2
CDS GCA 90 bp CAGCCGTACTGGCACCTGCAGTCACCTGGGAGTTTGCAAGACCCATaGTTAGGACTGCAGCCTTGTCGGCAAATAGCTCTGTTACATTCG +
Preference number: 5 (lower is better)
Translates to: QPYWHLQSPGSLQDP*LGLQPCRQIALLHS
Trigger: CGAATGTAACAGAGCTATTTGCCGACAAGGCTGCAGTCCTAAGCATGGGTCTTGCAAACTCCCAGGTGACTGCAGGTGCCAGTACGGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254958.10
ENST00000423891.6
CDS GCA 90 bp AGCTGTCAATCACTAGAAGATAGGCTTGGGATCAGATCACAGCCATaGACCCACAGATGCGGCATTCCTAAGCCAAGGGCCTGGGCCAAG +
Preference number: 5 (lower is better)
Translates to: SCQSLEDRLGIRSQP*THRCGIPKPRAWAK
Trigger: CTTGGCCCAGGCCCTTGGCTTAGGAATGCCGCATCTGTGGGTGCATGGCTGTGATCTGATCCCAAGCCTATCTTCTAGTGATTGACAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612857.1
CDS GCA 90 bp GGAACAAGCGATTCCACGAGGACGTTCCTTCCAAGAACAGATACATaGGCTACCTTAGTGGGACAGGATGGGGGTGCTGGGAGACTTCCA +
Preference number: 5 (lower is better)
Translates to: GTSDSTRTFLPRTDT*ATLVGQDGGAGRLP
Trigger: TGGAAGTCTCCCAGCACCCCCATCCTGTCCCACTAAGGTAGCGCATGTATCTGTTCTTGGAAGGAACGTCCTCGTGGAATCGCTTGTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000617965.2
CDS CCA 90 bp AGAACAGTCATCAATGTTTGTAGAGCATGTGGGGCCGGTCCAGCCTaGGGAACACTCACACTCAAAGCCCAGGGAGGTCTCCTTACAGCT +
Preference number: 5 (lower is better)
Translates to: RTVINVCRACGAGPA*GTLTLKAQGGLLTA
Trigger: AGCTGTAAGGAGACCTCCCTGGGCTTTGAGTGTGAGTGTTCCCCAGGCTGGACCGGCCCCACATGCTCTACAAACATTGATGACTGTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254958.10
ENST00000423891.6
CDS CCA 90 bp CTGAAAATTGGACTTACTTGTAGAGCATGTGGGGCCGGTCCAGCCTaGGGAACACTCACACTCAAAGCCCAGGGAGGTCTCCTTACAGCT +
Preference number: 5 (lower is better)
Translates to: LKIGLTCRACGAGPA*GTLTLKAQGGLLTA
Trigger: AGCTGTAAGGAGACCTCCCTGGGCTTTGAGTGTGAGTGTTCCCCAGGCTGGACCGGCCCCACATGCTCTACAAGTAAGTCCAATTTTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617965.2
CDS-3UTR CAA 90 bp CCATCCCTCTGTCAGGCAGAGCCTATTATACCCCGATTACCAGAACAGACTCAGGTAAAGGACTCGCCGTaGACCACACATGTGCCCCCA +
Preference number: 5 (lower is better)
Translates to: PSLCQAEPIIPRLPEQTQVKDSP*TTHVPP
Trigger: TGGGGGCACATGTGTGGTCAACGGCGAGTCCTTTAC...CTGAGTCTGTTCTGGTAATCGGGGTATAATAGGCTCTGCCTGACAGAGGGATGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR CAA 90 bp CTCTGTCAGGCAGAGCCTATTATACCCCGATTACCAGAACAGACTCAGCAGGGTTCGCACCGGTACCAGTaGTCTCCATCCACACAGGTG +
Preference number: 5 (lower is better)
Translates to: LCQAEPIIPRLPEQTQQGSHRYQ*SPSTQV
Trigger: CACCTGTGTGGATGGAGACAACTGGTACCGGTGCGA...ACCCTGCTGAGTCTGTTCTGGTAATCGGGGTATAATAGGCTCTGCCTGACAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR CAA 90 bp CTCTGTCAGGCAGAGCCTATTATACCCCGATTACCAGAACAGACTCAGCAGGGTGAAACTTCCTGGCACTaGGCACCACTGTGCCCTGGA +
Preference number: 5 (lower is better)
Translates to: LCQAEPIIPRLPEQTQQGETSWH*APLCPG
Trigger: TCCAGGGCACAGTGGTGCCAAGTGCCAGGAAGTTTC...ACCCTGCTGAGTCTGTTCTGGTAATCGGGGTATAATAGGCTCTGCCTGACAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR CAA 90 bp TCAGGCAGAGCCTATTATACCCCGATTACCAGAACAGACTCAGCAGGGTGGCAGAGTCAGAGGTGCACTTaGTCTTCACCGGCTGGAGAC +
Preference number: 5 (lower is better)
Translates to: SGRAYYTPITRTDSAGWQSQRCT*SSPAGD
Trigger: GTCTCCAGCCGGTGAAGACAAAGTGCACCTCTGACT...CTGCCACCCTGCTGAGTCTGTTCTGGTAATCGGGGTATAATAGGCTCTGCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR CAA 90 bp CCATCCCTCTGTCAGGCAGAGCCTATTATACCCCGATTACCAGAACAGACTCAGTGCTCCCGCACGTTGTaGGTGGTGTTGTCCTCAGAG +
Preference number: 5 (lower is better)
Translates to: PSLCQAEPIIPRLPEQTQCSRTL*VVLSSE
Trigger: CTCTGAGGACAACACCACCAACAACGTGCGGGAGCA...CTGAGTCTGTTCTGGTAATCGGGGTATAATAGGCTCTGCCTGACAGAGGGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS TCA 90 bp AGTCATCATCCCATTTGGCCCCATCTGGTATCACACTCCCCATGGTaGTGCAAGGTCTCCCTGAAACTTCCTGGCACTTGGCACCACTGT +
Preference number: 5 (lower is better)
Translates to: SHHPIWPHLVSHSPW*CKVSLKLPGTWHHC
Trigger: ACAGTGGTGCCAAGTGCCAGGAAGTTTCAGGGAGACCTTGCATCACCATGGGGAGTGTGATACCAGATGGGGCCAAATGGGATGATGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254958.10
ENST00000423891.6
ENST00000617965.2
CDS GCA 90 bp CTGTCTACCAGCGTGTACGCCGGCTGCTTGGCAAACCGGGCTTTCTaGTGGTGTTTGTCCATGTCGTCCTCTTCTACTTCAGAATTGTGT +
Preference number: 5 (lower is better)
Translates to: LSTSVYAGCLANRAF*WCLSMSSSSTSELC
Trigger: ACACAATTCTGAAGTAGAAGAGGACGACATGGACAAACACCAGCAGAAAGCCCGGTTTGCCAAGCAGCCGGCGTACACGCTGGTAGACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254958.10
ENST00000423891.6
CDS GCA 90 bp TCCAAGAACAGATACATGCGCTACCTTAGTGGGACAGGATGGGGGTaGTGGGAGACTTCCAAACACACAAGCCACCAGACTGCTTACCAG +
Preference number: 5 (lower is better)
Translates to: SKNRYMRYLSGTGWG*WETSKHTSHQTAYQ
Trigger: CTGGTAAGCAGTCTGGTGGCTTGTGTGTTTGGAAGTCTCCCAGCACCCCCATCCTGTCCCACTAAGGTAGCGCATGTATCTGTTCTTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000617965.2
CDS GCA 90 bp CACACCTGGGGTGCTGATGACAGCGGTTCTCAGACCTGGCTGCACTaGAGAATTCCAGAAGTTTATCAAAGACCATGGACTCCCCGATTC +
Preference number: 5 (lower is better)
Translates to: HTWGADDSGSQTWLH*RIPEVYQRPWTPRF
Trigger: GAATCGGGGAGTCCATGGTCTTTGATAAACTTCTGGAATTCTGCAGTGCAGCCAGGTCTGAGAACCGCTGTCATCAGCACCCCAGGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617965.2
CDS CCA 90 bp GGATGCACTTATCACAGTACAGGCCTTGCCAGCCGTACTGGCACCTaGAGACACACAGCACACCTCCAGGTTAGCCTTTTGAACGTTAAG +
Preference number: 5 (lower is better)
Translates to: GCTYHSTGLASRTGT*RHTAHLQVSLLNVK
Trigger: CTTAACGTTCAAAAGGCTAACCTGGAGGTGTGCTGTGTGTCTCCAGGTGCCAGTACGGCTGGCAAGGCCTGTACTGTGATAAGTGCATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617965.2
CDS CCA 90 bp GTTCCTTCCAAGAACAGATACATGCGCTACCTTAGTGGGACAGGATaGGGGTGCTGGGAGACTTCCAAACACACAAGCCACCAGACTGCT +
Preference number: 5 (lower is better)
Translates to: VPSKNRYMRYLSGTG*GCWETSKHTSHQTA
Trigger: AGCAGTCTGGTGGCTTGTGTGTTTGGAAGTCTCCCAGCACCCCCATCCTGTCCCACTAAGGTAGCGCATGTATCTGTTCTTGGAAGGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617965.2
CDS-3UTR CAA 90 bp TCAGGCAGAGCCTATTATACCCCGATTACCAGAACAGACTCAGCAGGGTGGCAGATTCTGATCGCTTCTTaGAGACGCTCCCCCTCCTCT +
Preference number: 5 (lower is better)
Translates to: SGRAYYTPITRTDSAGWQILIAS*RRSPSS
Trigger: AGAGGAGGGGGAGCGTCTCAAAGAAGCGATCAGAAT...CTGCCACCCTGCTGAGTCTGTTCTGGTAATCGGGGTATAATAGGCTCTGCCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR CAA 90 bp TCGATTTCCCAGCCAACCACAGAAACTACCATTGCCAGTGTAAGCCAGCTTGTCTTGAGGTTGAAGGTGTaGCCCCCGATGACAGGCGTG +
Preference number: 5 (lower is better)
Translates to: SISQPTTETTIASVSQLVLRLKV*PPMTGV
Trigger: CACGCCTGTCATCGGGGGCAACACCTTCAACCTCAA...GACAAGCTGGCTTACACTGGCAATGGTAGTTTCTGTGGTTGGCTGGGAAATCGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR CAA 90 bp CTTCACAGGGGGTCGTGCGGCAGTGGTCTTTCAGGTGTGAGCAGTTCTTGCCCTGCGTTTACACAAGGTTaGGCCTCACATTCATTTGCA +
Preference number: 5 (lower is better)
Translates to: LHRGSCGSGLSGVSSSCPAFTQG*ASHSFA
Trigger: TGCAAATGAATGTGAGGCCAAACCTTGTGTAAACGC...AGGGCAAGAACTGCTCACACCTGAAAGACCACTGCCGCACGACCCCCTGTGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000622545.1
CDS-3UTR CAA 90 bp CAGAAGCACATGGCAAAGCCGGTAGAACTACGTAAGCTCAGAAGAGGCCACACTCCATTATGGCAGGGGTaGGGCAGGCAGCTACTGTTT +
Preference number: 5 (lower is better)
Translates to: QKHMAKPVELRKLRRGHTPLWQG*GRQLLF
Trigger: AAACAGTAGCTGCCTGCCCAACCCCTGCCATAATGG...AGTGTGGCCTCTTCTGAGCTTACGTAGTTCTACCGGCTTTGCCATGTGCTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS GCA 90 bp GTGATACAAAAGCAGACATCAAACAGCTCTGCTTCTGGTTTCCATTaGAAGTCCCCAAGGGTGTCAGGATCTGCTCCGACAGCCCTGGGA +
Preference number: 5 (lower is better)
Translates to: VIQKQTSNSSASGFH*KSPRVSGSAPTALG
Trigger: TCCCAGGGCTGTCGGAGCAGATCCTGACACCCTTGGGGACTTGCAATGGAAACCAGAAGCAGAGCTGTTTGATGTCTGCTTTTGTATCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488480.2
CDS GCA 90 bp TATACCGCACCCCTTCAGGTGTGTCGTTGGAAGCCATGGCCACTGTaGAGCTGTCAATCACTAGAAGATAGGCTTGGGATCAGATCACAG +
Preference number: 5 (lower is better)
Translates to: YTAPLQVCRWKPWPL*SCQSLEDRLGIRSQ
Trigger: CTGTGATCTGATCCCAAGCCTATCTTCTAGTGATTGACAGCTGCACAGTGGCCATGGCTTCCAACGACACACCTGAAGGGGTGCGGTATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612857.1
CDS CCA 90 bp GCAGACCCAGGTGATACAAAAGCAGACATCAAACAGCTCTGCTTCTaGTTTCCATTGCAAGTCCCCAAGGGTGTCAGGATCTGCTCCGAC +
Preference number: 5 (lower is better)
Translates to: ADPGDTKADIKQLCF*FPLQVPKGVRICSD
Trigger: GTCGGAGCAGATCCTGACACCCTTGGGGACTTGCAATGGAAACCAGAAGCAGAGCTGTTTGATGTCTGCTTTTGTATCACCTGGGTCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488480.2
CDS CCA 90 bp TGGAGGAAATATACCGCACCCCTTCAGGTGTGTCGTTGGAAGCCATaGCCACTGTGCAGCTGTCAATCACTAGAAGATAGGCTTGGGATC +
Preference number: 5 (lower is better)
Translates to: WRKYTAPLQVCRWKP*PLCSCQSLEDRLGI
Trigger: GATCCCAAGCCTATCTTCTAGTGATTGACAGCTGCACAGTGGCCATGGCTTCCAACGACACACCTGAAGGGGTGCGGTATATTTCCTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612857.1
CDS CCA 90 bp CACAGACGTTGGAGGAAATATACCGCACCCCTTCAGGTGTGTCGTTaGAAGCCATGGCCACTGTGCAGCTGTCAATCACTAGAAGATAGG +
Preference number: 5 (lower is better)
Translates to: HRRWRKYTAPLQVCR*KPWPLCSCQSLEDR
Trigger: CCTATCTTCTAGTGATTGACAGCTGCACAGTGGCCATGGCTTCCAACGACACACCTGAAGGGGTGCGGTATATTTCCTCCAACGTCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612857.1
CDS CCA 90 bp AAGAACAGATACATGCGCTACCTTAGTGGGACAGGATGGGGGTGCTaGGAGACTTCCAAACACACAAGCCACCAGACTGCTTACCAGACT +
Preference number: 5 (lower is better)
Translates to: KNRYMRYLSGTGWGC*ETSKHTSHQTAYQT
Trigger: AGTCTGGTAAGCAGTCTGGTGGCTTGTGTGTTTGGAAGTCTCCCAGCACCCCCATCCTGTCCCACTAAGGTAGCGCATGTATCTGTTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000617965.2
CDS-3UTR CAA 90 bp TCAGGCAGAGCCTATTATACCCCGATTACCAGAACAGACTCAGCAGGGTGGCAGCTTAGGACTGCAGCCTaGTCGGCAAATAGCTCTGTT +
Preference number: 5 (lower is better)
Translates to: SGRAYYTPITRTDSAGWQLRTAA*SANSSV
Trigger: AACAGAGCTATTTGCCGACAAGGCTGCAGTCCTAAG...CTGCCACCCTGCTGAGTCTGTTCTGGTAATCGGGGTATAATAGGCTCTGCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR CAA 90 bp TCGATTTCCCAGCCAACCACAGAAACTACCATTGCCAGTGTAAGCCAGCTTGTCTTGTCAGGGCCTGTGTaGCTACAAGTTCCCCCGTTG +
Preference number: 5 (lower is better)
Translates to: SISQPTTETTIASVSQLVLSGPV*LQVPPL
Trigger: CAACGGGGGAACTTGTAGCAACACAGGCCCTGACAA...GACAAGCTGGCTTACACTGGCAATGGTAGTTTCTGTGGTTGGCTGGGAAATCGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR CAA 90 bp CCTCTGTCAGGCAGAGCCTATTATACCCCGATTACCAGAACAGACTCAGCAGGGCAGTCATCATCCCATTaGGCCCCATCTGGTATCACA +
Preference number: 5 (lower is better)
Translates to: PLSGRAYYTPITRTDSAGQSSSH*APSGIT
Trigger: TGTGATACCAGATGGGGCCAAATGGGATGATGACTG...CCCTGCTGAGTCTGTTCTGGTAATCGGGGTATAATAGGCTCTGCCTGACAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR CAA 90 bp TCAGGCAGAGCCTATTATACCCCGATTACCAGAACAGACTCAGCAGGGTGGCAGGCTTTCTGCTGGTGTTaGTCCATGTCGTCCTCTTCT +
Preference number: 5 (lower is better)
Translates to: SGRAYYTPITRTDSAGWQAFCWC*SMSSSS
Trigger: AGAAGAGGACGACATGGACAAACACCAGCAGAAAGC...CTGCCACCCTGCTGAGTCTGTTCTGGTAATCGGGGTATAATAGGCTCTGCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS TCA 90 bp GCAATTTCACAGTTGGGTCCTGAATACCCCTCAGGGCAGGAACACTaGTATTTGTCAGGGCCTGTGTTGCTACAAGTTCCCCCGTTGAGA +
Preference number: 5 (lower is better)
Translates to: AISQLGPEYPSGQEH*YLSGPVLLQVPPLR
Trigger: TCTCAACGGGGGAACTTGTAGCAACACAGGCCCTGACAAATATCAGTGTTCCTGCCCTGAGGGGTATTCAGGACCCAACTGTGAAATTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254958.10
ENST00000423891.6
ENST00000617965.2
CDS TCA 90 bp TCTGACCCATCCAGCCGGGAAGACAGTCGCAGTAGTAGCTGGCAATaGGATTCTTACAGGATTTGGCGTTTACACAAGGTTTGGCCTCAC +
Preference number: 5 (lower is better)
Translates to: SDPSSREDSRSSSWQ*DSYRIWRLHKVWPH
Trigger: GTGAGGCCAAACCTTGTGTAAACGCCAAATCCTGTAAGAATCTCATTGCCAGCTACTACTGCGACTGTCTTCCCGGCTGGATGGGTCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254958.10
ENST00000423891.6
ENST00000617965.2
ENST00000622545.1
CDS CCA 90 bp TGTGGCGGGGAGGTCTCTCACATGTCCCTAACAAGTATACTGACCTaGCTCTTATCACAGGCCAGGATCAACCTCAAGCTGTTCACTCTA +
Preference number: 5 (lower is better)
Translates to: CGGEVSHMSLTSILT*LLSQARINLKLFTL
Trigger: TAGAGTGAACAGCTTGAGGTTGATCCTGGCCTGTGATAAGAGCCAGGTCAGTATACTTGTTAGGGACATGTGAGAGACCTCCCCGCCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423891.6
CDS CCA 90 bp CAGACCTGGCTGCACTGCAGAATTCCAGAAGTTTATCAAAGACCATaGACTCCCCGATTCTGGAGGGAATCTGGGGGACCCAGAGATTTA +
Preference number: 5 (lower is better)
Translates to: QTWLHCRIPEVYQRP*TPRFWRESGGPRDL
Trigger: TAAATCTCTGGGTCCCCCAGATTCCCTCCAGAATCGGGGAGTCCATGGTCTTTGATAAACTTCTGGAATTCTGCAGTGCAGCCAGGTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000617965.2
CDS-3UTR CAA 90 bp CTCTGTCAGGCAGAGCCTATTATACCCCGATTACCAGAACAGACTCAGCAGGGTAATATACTCCGCCGATaGGAGCATGCACGACTGGAA +
Preference number: 5 (lower is better)
Translates to: LCQAEPIIPRLPEQTQQGNILRR*EHARLE
Trigger: TTCCAGTCGTGCATGCTCCAATCGGCGGAGTATATT...ACCCTGCTGAGTCTGTTCTGGTAATCGGGGTATAATAGGCTCTGCCTGACAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR CAA 90 bp TCAGGCAGAGCCTATTATACCCCGATTACCAGAACAGACTCAGCAGGGTGGCAGTCCATGCAAGTTTTGTaGCCATTCTGGTCACAGGCA +
Preference number: 5 (lower is better)
Translates to: SGRAYYTPITRTDSAGWQSMQVL*PFWSQA
Trigger: TGCCTGTGACCAGAATGGCAACAAAACTTGCATGGA...CTGCCACCCTGCTGAGTCTGTTCTGGTAATCGGGGTATAATAGGCTCTGCCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR CAA 90 bp CAGAAGCACATGGCAAAGCCGGTAGAACTACGTAAGCTCAGAAGAGGCCACACTGCCACATGTATTTCATaGTTCGCTGAAGGGGAAGGC +
Preference number: 5 (lower is better)
Translates to: QKHMAKPVELRKLRRGHTATCIS*FAEGEG
Trigger: GCCTTCCCCTTCAGCGAACAATGAAATACATGTGGC...AGTGTGGCCTCTTCTGAGCTTACGTAGTTCTACCGGCTTTGCCATGTGCTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR CAA 90 bp TCGATTTCCCAGCCAACCACAGAAACTACCATTGCCAGTGTAAGCCAGCTTGTCACGTTGTTGGTGGTGTaGTCCTCAGAGGCTGAGTGT +
Preference number: 5 (lower is better)
Translates to: SISQPTTETTIASVSQLVTLLVV*SSEAEC
Trigger: ACACTCAGCCTCTGAGGACAACACCACCAACAACGT...GACAAGCTGGCTTACACTGGCAATGGTAGTTTCTGTGGTTGGCTGGGAAATCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR CAA 90 bp CCATCCCTCTGTCAGGCAGAGCCTATTATACCCCGATTACCAGAACAGACTCAGGTTTGTTTGTCCAGTTaGGGTGTTTTGTCGGCGTGC +
Preference number: 5 (lower is better)
Translates to: PSLCQAEPIIPRLPEQTQVCLSS*GVLSAC
Trigger: GCACGCCGACAAAACACCCAAACTGGACAAACAAAC...CTGAGTCTGTTCTGGTAATCGGGGTATAATAGGCTCTGCCTGACAGAGGGATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR CAA 90 bp ATGCGGCACTCGATTTCCCAGCCAACCACAGAAACTACCATTGCCAGTGTAAGCTCCTTGAGGCACACTTaGAAGTATGTGTCACACTCG +
Preference number: 5 (lower is better)
Translates to: MRHSISQPTTETTIASVSSLRHT*KYVSHS
Trigger: CGAGTGTGACACATACTTCAAAGTGTGCCTCAAGGA...GCTTACACTGGCAATGGTAGTTTCTGTGGTTGGCTGGGAAATCGAGTGCCGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR CAA 90 bp ATGCGGCACTCGATTTCCCAGCCAACCACAGAAACTACCATTGCCAGTGTAAGCCCTTCCATGCAAGTTTaGTTGCCATTCTGGTCACAG +
Preference number: 5 (lower is better)
Translates to: MRHSISQPTTETTIASVSPSMQV*LPFWSQ
Trigger: CTGTGACCAGAATGGCAACAAAACTTGCATGGAAGG...GCTTACACTGGCAATGGTAGTTTCTGTGGTTGGCTGGGAAATCGAGTGCCGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR CAA 90 bp CCATCCCTCTGTCAGGCAGAGCCTATTATACCCCGATTACCAGAACAGACTCAGGTTCCCGTGAAGCCTTaGTTACAGTCACAGGTGAAT +
Preference number: 5 (lower is better)
Translates to: PSLCQAEPIIPRLPEQTQVPVKP*LQSQVN
Trigger: ATTCACCTGTGACTGTAACAAAGGCTTCACGGGAAC...CTGAGTCTGTTCTGGTAATCGGGGTATAATAGGCTCTGCCTGACAGAGGGATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR CAA 90 bp CTCTGTCAGGCAGAGCCTATTATACCCCGATTACCAGAACAGACTCAGCAGGGTTTGTCAGTGATTTCCTaGATCGGGTTCCCATCATCC +
Preference number: 5 (lower is better)
Translates to: LCQAEPIIPRLPEQTQQGLSVIS*IGFPSS
Trigger: GGATGATGGGAACCCGATCAAGGAAATCACTGACAA...ACCCTGCTGAGTCTGTTCTGGTAATCGGGGTATAATAGGCTCTGCCTGACAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR CAA 90 bp CTCTGTCAGGCAGAGCCTATTATACCCCGATTACCAGAACAGACTCAGCAGGGTTTCTCAATGGGGTTTTaGATCTGGTTCAGCTGCTCC +
Preference number: 5 (lower is better)
Translates to: LCQAEPIIPRLPEQTQQGFSMGF*IWFSCS
Trigger: GGAGCAGCTGAACCAGATCAAAAACCCCATTGAGAA...ACCCTGCTGAGTCTGTTCTGGTAATCGGGGTATAATAGGCTCTGCCTGACAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR CAA 90 bp ATGCGGCACTCGATTTCCCAGCCAACCACAGAAACTACCATTGCCAGTGTAAGCCTGTTGACTAGCTTTTaGCATAGCTGTGAGATGCGG +
Preference number: 5 (lower is better)
Translates to: MRHSISQPTTETTIASVSLLTSF*HSCEMR
Trigger: CCGCATCTCACAGCTATGCAAAAAGCTAGTCAACAG...GCTTACACTGGCAATGGTAGTTTCTGTGGTTGGCTGGGAAATCGAGTGCCGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR CAA 90 bp TCGATTTCCCAGCCAACCACAGAAACTACCATTGCCAGTGTAAGCCAGCTTGTCAGCAGCCCCAGGTCTTaGAGAACTCCAGATGAGTTT +
Preference number: 5 (lower is better)
Translates to: SISQPTTETTIASVSQLVSSPRS*RTPDEF
Trigger: AAACTCATCTGGAGTTCTCAAAGACCTGGGGCTGCT...GACAAGCTGGCTTACACTGGCAATGGTAGTTTCTGTGGTTGGCTGGGAAATCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS GCA 90 bp TCTCAAATTAGACAGGCGGCTTATCAAGCAGAAGCTTCCAGAGAGTaGCTTACCCACTTAATGCCCTCACATGGGCATTTAGTCACCGGT +
Preference number: 5 (lower is better)
Translates to: SQIRQAAYQAEASRE*LTHLMPSHGHLVTG
Trigger: ACCGGTGACTAAATGCCCATGTGAGGGCATTAAGTGGGTAAGGCACTCTCTGGAAGCTTCTGCTTGATAAGCCGCCTGTCTAATTTGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488480.2
CDS CCA 90 bp GTGCCCGCGGTCTGCTATACGATGTACTCCATTCGGTTTAAGCTCTaGGCACTTTCCAAGTCTCTGTTGTCCTGTTTGTTTGTCCAGTTT +
Preference number: 5 (lower is better)
Translates to: VPAVCYTMYSIRFKL*ALSKSLLSCLFVQF
Trigger: AAACTGGACAAACAAACAGGACAACAGAGACTTGGAAAGTGCCCAGAGCTTAAACCGAATGGAGTACATCGTATAGCAGACCGCGGGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254958.10
ENST00000423891.6
CDS CCA 90 bp TGCAGAATTCCAGAAGTTTATCAAAGACCATGGACTCCCCGATTCTaGAGGGAATCTGGGGGACCCAGAGATTTACACTGTAAAGCAGCC +
Preference number: 5 (lower is better)
Translates to: CRIPEVYQRPWTPRF*RESGGPRDLHCKAA
Trigger: GGCTGCTTTACAGTGTAAATCTCTGGGTCCCCCAGATTCCCTCCAGAATCGGGGAGTCCATGGTCTTTGATAAACTTCTGGAATTCTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000617965.2
CDS-3UTR CAA 90 bp CAGAAGCACATGGCAAAGCCGGTAGAACTACGTAAGCTCAGAAGAGGCCACACTTGGCCTCACATTCATTaGCATCTAACTGGCACGTTT +
Preference number: 5 (lower is better)
Translates to: QKHMAKPVELRKLRRGHTWPHIH*HLTGTF
Trigger: AAACGTGCCAGTTAGATGCAAATGAATGTGAGGCCA...AGTGTGGCCTCTTCTGAGCTTACGTAGTTCTACCGGCTTTGCCATGTGCTTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR CAA 90 bp CAGAAGCACATGGCAAAGCCGGTAGAACTACGTAAGCTCAGAAGAGGCCACACTGCGTTTACACAAGGTTaGGCCTCACATTCATTTGCA +
Preference number: 5 (lower is better)
Translates to: QKHMAKPVELRKLRRGHTAFTQG*ASHSFA
Trigger: TGCAAATGAATGTGAGGCCAAACCTTGTGTAAACGC...AGTGTGGCCTCTTCTGAGCTTACGTAGTTCTACCGGCTTTGCCATGTGCTTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR CAA 90 bp GAAATAGTCACTGGCACGGTTGTAGCACTGGGCACCGTTCTGGCAGGGATTAGGAGATTCTTACAGGATTaGGCGTTTACACAAGGTTTG +
Preference number: 5 (lower is better)
Translates to: EIVTGTVVALGTVLAGIRRFLQD*AFTQGL
Trigger: CAAACCTTGTGTAAACGCCAAATCCTGTAAGAATCT...CCTAATCCCTGCCAGAACGGTGCCCAGTGCTACAACCGTGCCAGTGACTATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622545.1
CDS-3UTR CAA 90 bp ATTACACAGTCTAATTCTATAGGTCCTCAGCAGAAGCTCCTCCCCATAAGCTATCCTTCAGGTGTGTCGTaGGAAGCCATGGCCACTGTG +
Preference number: 5 (lower is better)
Translates to: ITQSNSIGPQQKLLPISYPSGVS*EAMATV
Trigger: CACAGTGGCCATGGCTTCCAACGACACACCTGAAGG...ATAGCTTATGGGGAGGAGCTTCTGCTGAGGACCTATAGAATTAGACTGTGTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613518.1
CDS-3UTR CAA 90 bp CCTCTGTCAGGCAGAGCCTATTATACCCCGATTACCAGAACAGACTCAGCAGGGCGCAAGCGATGTAGATaGAATATTCAGCGGAAACAT +
Preference number: 5 (lower is better)
Translates to: PLSGRAYYTPITRTDSAGRKRCR*NIQRKH
Trigger: ATGTTTCCGCTGAATATTCAATCTACATCGCTTGCG...CCCTGCTGAGTCTGTTCTGGTAATCGGGGTATAATAGGCTCTGCCTGACAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR CAA 90 bp TCGAGTATGACACGACAGTTTAAAGAACTACAAGCCCTCAGACTCTACCTAGCGTTGATGGGGACCGTGTaGGCCCCATGTTTCTCAATG +
Preference number: 5 (lower is better)
Translates to: SSMTRQFKELQALRLYLALMGTV*APCFSM
Trigger: CATTGAGAAACATGGGGCCAACACGGTCCCCATCAA...CGCTAGGTAGAGTCTGAGGGCTTGTAGTTCTTTAAACTGTCGTGTCATACTCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR CAA 90 bp CAGAAGCACATGGCAAAGCCGGTAGAACTACGTAAGCTCAGAAGAGGCCACACTTCTCTGTTGTCCTGTTaGTTTGTCCAGTTTGGGTGT +
Preference number: 5 (lower is better)
Translates to: QKHMAKPVELRKLRRGHTSLLSC*FVQFGC
Trigger: ACACCCAAACTGGACAAACAAACAGGACAACAGAGA...AGTGTGGCCTCTTCTGAGCTTACGTAGTTCTACCGGCTTTGCCATGTGCTTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR CAA 90 bp CAGAAGCACATGGCAAAGCCGGTAGAACTACGTAAGCTCAGAAGAGGCCACACTCTTTCCAAGTCTCTGTaGTCCTGTTTGTTTGTCCAG +
Preference number: 5 (lower is better)
Translates to: QKHMAKPVELRKLRRGHTLSKSL*SCLFVQ
Trigger: CTGGACAAACAAACAGGACAACAGAGACTTGGAAAG...AGTGTGGCCTCTTCTGAGCTTACGTAGTTCTACCGGCTTTGCCATGTGCTTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS GCA 90 bp GAAATCTGTTCTGTTCTTCAGAGGCCGCCTCTGAACTCTTACTTCTaGAACGGCAGCAATCAGCGAGCTGTTTCCATCACGTTTACTAAC +
Preference number: 5 (lower is better)
Translates to: EICSVLQRPPLNSYF*NGSNQRAVSITFTN
Trigger: GTTAGTAAACGTGATGGAAACAGCTCGCTGATTGCTGCCGTTGCAGAAGTAAGAGTTCAGAGGCGGCCTCTGAAGAACAGAACAGATTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254958.10
ENST00000423891.6
ENST00000617357.1
CDS GCA 90 bp ATTAATGCAGACCCAGGTGATACAAAAGCAGACATCAAACAGCTCTaGTTCTGGTTTCCATTGCAAGTCCCCAAGGGTGTCAGGATCTGC +
Preference number: 5 (lower is better)
Translates to: INADPGDTKADIKQL*FWFPLQVPKGVRIC
Trigger: GCAGATCCTGACACCCTTGGGGACTTGCAATGGAAACCAGAAGCAGAGCTGTTTGATGTCTGCTTTTGTATCACCTGGGTCTGCATTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488480.2
CDS CCA 90 bp CACACACACTTAAATCCGTTAACCAGGTCCTGGCAGGTGCCCCCGTaGGAACAGTTATTAGGAGAACAGTCATCAATGTTTGTAGAGCAT +
Preference number: 5 (lower is better)
Translates to: HTHLNPLTRSWQVPP*EQLLGEQSSMFVEH
Trigger: ATGCTCTACAAACATTGATGACTGTTCTCCTAATAACTGTTCCCACGGGGGCACCTGCCAGGACCTGGTTAACGGATTTAAGTGTGTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254958.10
ENST00000423891.6
CDS-3UTR CAA 90 bp TCAGGCAGAGCCTATTATACCCCGATTACCAGAACAGACTCAGCAGGGTGGCAGAGATTCTTACAGGATTaGGCGTTTACACAAGGTTTG +
Preference number: 5 (lower is better)
Translates to: SGRAYYTPITRTDSAGWQRFLQD*AFTQGL
Trigger: CAAACCTTGTGTAAACGCCAAATCCTGTAAGAATCT...CTGCCACCCTGCTGAGTCTGTTCTGGTAATCGGGGTATAATAGGCTCTGCCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR CAA 90 bp CCATCCCTCTGTCAGGCAGAGCCTATTATACCCCGATTACCAGAACAGACTCAGCCGTTTCTACAAGGGTaGCTCTCACAGTCATTAATA +
Preference number: 5 (lower is better)
Translates to: PSLCQAEPIIPRLPEQTQPFLQG*LSQSLI
Trigger: TATTAATGACTGTGAGAGCAACCCTTGTAGAAACGG...CTGAGTCTGTTCTGGTAATCGGGGTATAATAGGCTCTGCCTGACAGAGGGATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR CAA 90 bp ATGCGGCACTCGATTTCCCAGCCAACCACAGAAACTACCATTGCCAGTGTAAGCGAAGACTGGCATTCATaGATGTTTATTCTGCAGTCG +
Preference number: 5 (lower is better)
Translates to: MRHSISQPTTETTIASVSEDWHS*MFILQS
Trigger: CGACTGCAGAATAAACATCAATGAATGCCAGTCTTC...GCTTACACTGGCAATGGTAGTTTCTGTGGTTGGCTGGGAAATCGAGTGCCGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR CAA 90 bp ATGCGGCACTCGATTTCCCAGCCAACCACAGAAACTACCATTGCCAGTGTAAGCTGTTGTCCTGTTTGTTaGTCCAGTTTGGGTGTTTTG +
Preference number: 5 (lower is better)
Translates to: MRHSISQPTTETTIASVSCCPVC*SSLGVL
Trigger: CAAAACACCCAAACTGGACAAACAAACAGGACAACA...GCTTACACTGGCAATGGTAGTTTCTGTGGTTGGCTGGGAAATCGAGTGCCGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS TCA 90 bp CACCCCAGGGAAGCCAAGATACTGGCAACGTGCCACATCACATTATaGCAGGCAAAGTTGAGACTCCAGGCAAAGAGTTTTAAAGCATTT +
Preference number: 5 (lower is better)
Translates to: HPREAKILATCHITL*QAKLRLQAKSFKAF
Trigger: AAATGCTTTAAAACTCTTTGCCTGGAGTCTCAACTTTGCCTGTCATAATGTGATGTGGCACGTTGCCAGTATCTTGGCTTCCCTGGGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612857.1
CDS TCA 90 bp GTACTGGCACCTGGAGACACACAGCACACCTCCAGGTTAGCCTTTTaGACGTTAAGAGACACCTGTACAATTCAAATGGAAGACTGCAAA +
Preference number: 5 (lower is better)
Translates to: VLAPGDTQHTSRLAF*TLRDTCTIQMEDCK
Trigger: TTTGCAGTCTTCCATTTGAATTGTACAGGTGTCTCTTAACGTTCAAAAGGCTAACCTGGAGGTGTGCTGTGTGTCTCCAGGTGCCAGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617965.2
CDS-3UTR CAA 90 bp CAGAAGCACATGGCAAAGCCGGTAGAACTACGTAAGCTCAGAAGAGGCCACACTAATAATACTGTCAGGTaGAACGGTGTCATTACTGGA +
Preference number: 5 (lower is better)
Translates to: QKHMAKPVELRKLRRGHTNNTVR*NGVITG
Trigger: TCCAGTAATGACACCGTTCAACCTGACAGTATTATT...AGTGTGGCCTCTTCTGAGCTTACGTAGTTCTACCGGCTTTGCCATGTGCTTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR CAA 90 bp TCAACCACTCACATTTTGGCTATGTTAAGTCATAGCTCAACTTGTTCCCTTACTCCTTCAGGTGTGTCGTaGGAAGCCATGGCCACTGTG +
Preference number: 5 (lower is better)
Translates to: STTHILAMLSHSSTCSLTPSGVS*EAMATV
Trigger: CACAGTGGCCATGGCTTCCAACGACACACCTGAAGG...AGTAAGGGAACAAGTTGAGCTATGACTTAACATAGCCAAAATGTGAGTGGTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR CAA 90 bp CAGAAGCACATGGCAAAGCCGGTAGAACTACGTAAGCTCAGAAGAGGCCACACTGGTGACATCATCTCCTaGTTAAAGGTAAATGTGATG +
Preference number: 5 (lower is better)
Translates to: QKHMAKPVELRKLRRGHTGDIIS*LKVNVM
Trigger: CATCACATTTACCTTTAACAAGGAGATGATGTCACC...AGTGTGGCCTCTTCTGAGCTTACGTAGTTCTACCGGCTTTGCCATGTGCTTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS-3UTR CAA 90 bp CCTCTGTCAGGCAGAGCCTATTATACCCCGATTACCAGAACAGACTCAGCAGGGTATTCACACTTGCTGTaGAATAACAAGGGAATCAAG +
Preference number: 5 (lower is better)
Translates to: PLSGRAYYTPITRTDSAGYSHLL*NNKGIK
Trigger: CTTGATTCCCTTGTTATTCAACAGCAAGTGTGAATA...CCCTGCTGAGTCTGTTCTGGTAATCGGGGTATAATAGGCTCTGCCTGACAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS CCA 90 bp CCTTGCCATCGAATAATGAGGTGTGAATGGGTCTTATACTTACAATaGCCACATGTATTTCATTGTTCGCTGAAGGGGAAGGCTCGCAAG +
Preference number: 5 (lower is better)
Translates to: PCHRIMRCEWVLYLQ*PHVFHCSLKGKARK
Trigger: CTTGCGAGCCTTCCCCTTCAGCGAACAATGAAATACATGTGGCCATTGTAAGTATAAGACCCATTCACACCTCATTATTCGATGGCAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617357.1
CDS-3UTR CAA 90 bp TTTATTACACAGTCTAATTCTATAGGTCCTCAGCAGAAGCTCCTCCCCATAAGCGAAAGTTTTCCCACGTaGAAGTGGGATCCCTCCAAC +
Preference number: 5 (lower is better)
Translates to: FITQSNSIGPQQKLLPISESFPT*KWDPSN
Trigger: GTTGGAGGGATCCCACTTCAACGTGGGAAAACTTTC...GCTTATGGGGAGGAGCTTCTGCTGAGGACCTATAGAATTAGACTGTGTAATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613518.1
CDS CCA 90 bp GTGTCTGCAAAGCTTTTTGTCAGTGAATTTGCTCCATTCAGACACTaGTTAACCGAACTGCCTTGCCATCGAATAATGAGGTGTGAATGG +
Preference number: 5 (lower is better)
Translates to: VSAKLFVSEFAPFRH*LTELPCHRIMRCEW
Trigger: CCATTCACACCTCATTATTCGATGGCAAGGCAGTTCGGTTAACCAGTGTCTGAATGGAGCAAATTCACTGACAAAAAGCTTTGCAGACAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000617357.1
CDS-3UTR CAA 90 bp TTTATTACACAGTCTAATTCTATAGGTCCTCAGCAGAAGCTCCTCCCCATAAGCGTTCCCGTGAAGCCTTaGTTACAGTCACAGGTGAAT +
Preference number: 5 (lower is better)
Translates to: FITQSNSIGPQQKLLPISVPVKP*LQSQVN
Trigger: ATTCACCTGTGACTGTAACAAAGGCTTCACGGGAAC...GCTTATGGGGAGGAGCTTCTGCTGAGGACCTATAGAATTAGACTGTGTAATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613518.1
CDS GCA 90 bp GTCAGTGAATTTGCTCCATTCAGACACTGGTTAACCGAACTGCCTTaGCATCGAATAATGAGGTGTGAATGGGTCTTATACTTACAATGG +
Preference number: 5 (lower is better)
Translates to: VSEFAPFRHWLTELP*HRIMRCEWVLYLQW
Trigger: CCATTGTAAGTATAAGACCCATTCACACCTCATTATTCGATGGCAAGGCAGTTCGGTTAACCAGTGTCTGAATGGAGCAAATTCACTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617357.1
CDS GCA 90 bp GAGTTTGCCCAAAATAGCACACCTAGAGGCTGCATTCTCCACTTCTaGTCTGACCAGAGACAACTCCTAACAATTTATGAAGTATTCACT +
Preference number: 5 (lower is better)
Translates to: EFAQNSTPRGCILHF*SDQRQLLTIYEVFT
Trigger: AGTGAATACTTCATAAATTGTTAGGAGTTGTCTCTGGTCAGAGCAGAAGTGGAGAATGCAGCCTCTAGGTGTGCTATTTTGGGCAAACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617965.2
CDS CCA 90 bp CACTGGTTAACCGAACTGCCTTGCCATCGAATAATGAGGTGTGAATaGGTCTTATACTTACAATGGCCACATGTATTTCATTGTTCGCTG +
Preference number: 5 (lower is better)
Translates to: HWLTELPCHRIMRCE*VLYLQWPHVFHCSL
Trigger: CAGCGAACAATGAAATACATGTGGCCATTGTAAGTATAAGACCCATTCACACCTCATTATTCGATGGCAAGGCAGTTCGGTTAACCAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617357.1
CDS TCA 90 bp CAGACACTGGTTAACCGAACTGCCTTGCCATCGAATAATGAGGTGTaGATGGGTCTTATACTTACAATGGCCACATGTATTTCATTGTTC +
Preference number: 5 (lower is better)
Translates to: QTLVNRTALPSNNEV*MGLILTMATCISLF
Trigger: GAACAATGAAATACATGTGGCCATTGTAAGTATAAGACCCATTCACACCTCATTATTCGATGGCAAGGCAGTTCGGTTAACCAGTGTCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617357.1
CDS CCA 90 bp AATGATAAAGTCGTAGTTAACACCAGCAAAATACCTTTGCTAAATTaGAACCAGGCCCGCACCACACTTAGTTTCATTTGCTGTGGGACA +
Preference number: 5 (lower is better)
Translates to: NDKVVVNTSKIPLLN*NQARTTLSFICCGT
Trigger: TGTCCCACAGCAAATGAAACTAAGTGTGGTGCGGGCCTGGTTCCAATTTAGCAAAGGTATTTTGCTGGTGTTAACTACGACTTTATCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488480.2
CDS-3UTR CAA 90 bp ATATTTATTACACAGTCTAATTCTATAGGTCCTCAGCAGAAGCTCCTCCCCATAGAAATCACTGCGGTCTaGCTTCCAGAGATTTCCAGT +
Preference number: 5 (lower is better)
Translates to: IFITQSNSIGPQQKLLPIEITAV*LPEISS
Trigger: ACTGGAAATCTCTGGAAGCAAGACCGCAGTGATTTC...TATGGGGAGGAGCTTCTGCTGAGGACCTATAGAATTAGACTGTGTAATAAATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613518.1
CDS-3UTR CAA 90 bp ATATTTATTACACAGTCTAATTCTATAGGTCCTCAGCAGAAGCTCCTCCCCATACCGTTTCTACAAGGGTaGCTCTCACAGTCATTAATA +
Preference number: 5 (lower is better)
Translates to: IFITQSNSIGPQQKLLPIPFLQG*LSQSLI
Trigger: TATTAATGACTGTGAGAGCAACCCTTGTAGAAACGG...TATGGGGAGGAGCTTCTGCTGAGGACCTATAGAATTAGACTGTGTAATAAATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613518.1
CDS CCA 90 bp GGCTCAGAAGTAGCTAAGAAGTCAGGAAAAATAGTTCTTTACAGGTaGAAAACCTTATTCCTCTCATTTGCTTACAGAGTTTGCCCAAAA +
Preference number: 5 (lower is better)
Translates to: GSEVAKKSGKIVLYR*KTLFLSFAYRVCPK
Trigger: TTTTGGGCAAACTCTGTAAGCAAATGAGAGGAATAAGGTTTTCCACCTGTAAAGAACTATTTTTCCTGACTTCTTAGCTACTTCTGAGCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000617965.2
CDS-3UTR CAA 90 bp TCAACCACTCACATTTTGGCTATGTTAAGTCATAGCTCAACTTGTTCCCTTACTCTTCGTAATAGCACTTaGATTTCCTCACTTAAGGCA +
Preference number: 5 (lower is better)
Translates to: STTHILAMLSHSSTCSLTLRNST*ISSLKA
Trigger: TGCCTTAAGTGAGGAAATCAAAGTGCTATTACGAAG...AGTAAGGGAACAAGTTGAGCTATGACTTAACATAGCCAAAATGTGAGTGGTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS TCA 90 bp AGGAGAACAGTCATCAATGTCTGGTCAACAAGAAAAGGAGGGGGTTaGCAATTTAATTCAATCCATCTGACAATTAGATCCTTTAACATC +
Preference number: 5 (lower is better)
Translates to: RRTVINVWSTRKGGG*QFNSIHLTIRSFNI
Trigger: GATGTTAAAGGATCTAATTGTCAGATGGATTGAATTAAATTGTCAACCCCCTCCTTTTCTTGTTGACCAGACATTGATGACTGTTCTCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000617965.2
CDS GCA 72 bp GGGCACTCGGGACGCCGCCGCTGCTGTTCGCGCTGGTaGTGCCGCCGGTGCTGCCGTCGCCGCTGCCCCTGC +
Preference number: 6 (lower is better)
Translates to: GHSGRRRCCSRW*CRRCCRRRCPC
Trigger: GCAGGGGCAGCGGCGACGGCAGCACCGGCGGCAGCACCAGCGCGAACAGCAGCGGCGGCGTCCCGAGTGCCC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS GCA 72 bp TGGTGCTGCCGCCGGTGCTGCCGTCGCCGCTGCCCCTaGGGCCGCCGCGTCCCGGCTCTAATATACTCCGCC +
Preference number: 6 (lower is better)
Translates to: WCCRRCCRRRCP*GRRVPALIYSA
Trigger: GGCGGAGTATATTAGAGCCGGGACGCGGCGGCCGCAGGGGCAGCGGCGACGGCAGCACCGGCGGCAGCACCA
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS CAA 90 bp GGCAGCACGATGCGGTTGCGGTCGTTGCCGCGGCTGGCCTTGAGGTaGAAGGTGTTGCCCCCGATGACAGGCGTGGACCCTGAGCCGAAG +
Preference number: 6 (lower is better)
Translates to: GSTMRLRSLPRLALR*KVLPPMTGVDPEPK
Trigger: CTTCGGCTCAGGGTCCACGCCTGTCATCGGGGGCAACACCTTCAACCTCAAGGCCAGCCGCGGCAACGACCGCAACCGCATCGTGCTGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS CAA 72 bp ATGCAGCTCTGCCCGCTGGGGCACTCGCTGTGCCCTTaGTGGAGCAGGCAAGGTCGAGGGCCACACCAGACC +
Preference number: 6 (lower is better)
Translates to: MQLCPLGHSLCP*WSRQGRGPHQT
Trigger: GGTCTGGTGTGGCCCTCGACCTTGCCTGCTCCACAAAGGGCACAGCGAGTGCCCCAGCGGGCAGAGCTGCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254958.10
ENST00000423891.6
ENST00000617965.2
CDS TCA 72 bp CTCCCGCACGTTGTTGGTGGTGTTGTCCTCAGAGGCTaGGTGTGTGTGGCTGCCCGGCTTCCGCCGCTTCCG +
Preference number: 6 (lower is better)
Translates to: LPHVVGGVVLRG*VCVAARLPPLP
Trigger: CGGAAGCGGCGGAAGCCGGGCAGCCACACACACTCAGCCTCTGAGGACAACACCACCAACAACGTGCGGGAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254958.10
ENST00000423891.6
CDS CCA 72 bp ACTGGTCGTCCAGGATGGGGATGCAGCTCTGCCCGCTaGGGCACTCGCTGTGCCCTTTGTGGAGCAGGCAAG +
Preference number: 6 (lower is better)
Translates to: TGRPGWGCSSAR*GTRCALCGAGK
Trigger: CTTGCCTGCTCCACAAAGGGCACAGCGAGTGCCCCAGCGGGCAGAGCTGCATCCCCATCCTGGACGACCAGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254958.10
ENST00000423891.6
ENST00000617965.2
CDS CAA 72 bp ACTTTGAAGTATGTGTCACACTCGTCGCGGGTGCACTaGCGGTCTCCCGGGTTCCGGGCGCCGCCGCAGCAG +
Preference number: 6 (lower is better)
Translates to: TLKYVSHSSRVH*RSPGFRAPPQQ
Trigger: CTGCTGCGGCGGCGCCCGGAACCCGGGAGACCGCAAGTGCACCCGCGACGAGTGTGACACATACTTCAAAGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS CAA 72 bp ATGCGGTTGCGGTCGTTGCCGCGGCTGGCCTTGAGGTaGAAGGTGTTGCCCCCGATGACAGGCGTGGACCCT +
Preference number: 6 (lower is better)
Translates to: MRLRSLPRLALR*KVLPPMTGVDP
Trigger: AGGGTCCACGCCTGTCATCGGGGGCAACACCTTCAACCTCAAGGCCAGCCGCGGCAACGACCGCAACCGCAT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS CAA 72 bp AGCACGATGCGGTTGCGGTCGTTGCCGCGGCTGGCCTaGAGGTTGAAGGTGTTGCCCCCGATGACAGGCGTG +
Preference number: 6 (lower is better)
Translates to: STMRLRSLPRLA*RLKVLPPMTGV
Trigger: CACGCCTGTCATCGGGGGCAACACCTTCAACCTCAAGGCCAGCCGCGGCAACGACCGCAACCGCATCGTGCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS CAA 90 bp CTGAAAGGCAGCACGATGCGGTTGCGGTCGTTGCCGCGGCTGGCCTaGAGGTTGAAGGTGTTGCCCCCGATGACAGGCGTGGACCCTGAG +
Preference number: 6 (lower is better)
Translates to: LKGSTMRLRSLPRLA*RLKVLPPMTGVDPE
Trigger: CTCAGGGTCCACGCCTGTCATCGGGGGCAACACCTTCAACCTCAAGGCCAGCCGCGGCAACGACCGCAACCGCATCGTGCTGCCTTTCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS CAA 90 bp AGGATGGGGATGCAGCTCTGCCCGCTGGGGCACTCGCTGTGCCCTTaGTGGAGCAGGCAAGGTCGAGGGCCACACCAGACCTTTGAGCAG +
Preference number: 6 (lower is better)
Translates to: RMGMQLCPLGHSLCP*WSRQGRGPHQTFEQ
Trigger: CTGCTCAAAGGTCTGGTGTGGCCCTCGACCTTGCCTGCTCCACAAAGGGCACAGCGAGTGCCCCAGCGGGCAGAGCTGCATCCCCATCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254958.10
ENST00000423891.6
ENST00000617965.2
CDS GCA 72 bp GCTGGAGACTGGAAGACCGACACTCGCCCACACCAGTaGAGGGGTGGACGAAGCACTGGTCGTCCAGGATGG +
Preference number: 6 (lower is better)
Translates to: AGDWKTDTRPHQ*RGGRSTGRPGW
Trigger: CCATCCTGGACGACCAGTGCTTCGTCCACCCCTGCACTGGTGTGGGCGAGTGTCGGTCTTCCAGTCTCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254958.10
ENST00000423891.6
CDS GCA 72 bp TGGTGGTGTTGTCCTCAGAGGCTGAGTGTGTGTGGCTaGCCGGCTTCCGCCGCTTCCGCAGGCACCAGTAGA +
Preference number: 6 (lower is better)
Translates to: WWCCPQRLSVCG*PASAASAGTSR
Trigger: TCTACTGGTGCCTGCGGAAGCGGCGGAAGCCGGGCAGCCACACACACTCAGCCTCTGAGGACAACACCACCA
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254958.10
ENST00000423891.6
CDS CCA 72 bp TTGTTGGTGGTGTTGTCCTCAGAGGCTGAGTGTGTGTaGCTGCCCGGCTTCCGCCGCTTCCGCAGGCACCAG +
Preference number: 6 (lower is better)
Translates to: LLVVLSSEAECV*LPGFRRFRRHQ
Trigger: CTGGTGCCTGCGGAAGCGGCGGAAGCCGGGCAGCCACACACACTCAGCCTCTGAGGACAACACCACCAACAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254958.10
ENST00000423891.6
CDS CAA 72 bp CTCGGCCAGGCGAAACTGAAAGGCAGCACGATGCGGTaGCGGTCGTTGCCGCGGCTGGCCTTGAGGTTGAAG +
Preference number: 6 (lower is better)
Translates to: LGQAKLKGSTMR*RSLPRLALRLK
Trigger: CTTCAACCTCAAGGCCAGCCGCGGCAACGACCGCAACCGCATCGTGCTGCCTTTCAGTTTCGCCTGGCCGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS CAA 90 bp TTGAGGCACACTTTGAAGTATGTGTCACACTCGTCGCGGGTGCACTaGCGGTCTCCCGGGTTCCGGGCGCCGCCGCAGCAGTTCCCGTTC +
Preference number: 6 (lower is better)
Translates to: LRHTLKYVSHSSRVH*RSPGFRAPPQQFPF
Trigger: GAACGGGAACTGCTGCGGCGGCGCCCGGAACCCGGGAGACCGCAAGTGCACCCGCGACGAGTGTGACACATACTTCAAAGTGTGCCTCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS CCA 72 bp TGCACCCACAGATGCGGCATTCCTAAGCCAAGGGCCTaGGCCAAGCCCACTTTCCTGGAGACAGGGACCCTC +
Preference number: 6 (lower is better)
Translates to: CTHRCGIPKPRA*AKPTFLETGTL
Trigger: GAGGGTCCCTGTCTCCAGGAAAGTGGGCTTGGCCCAGGCCCTTGGCTTAGGAATGCCGCATCTGTGGGTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612857.1
CDS CCA 72 bp CATTTAAAGAGGGCCCGGGGAGCTTCTGTGGCCTGCTaGAGTTCCGCAAGTGACAGGTGGGGGCCTAGGACC +
Preference number: 6 (lower is better)
Translates to: HLKRARGASVAC*SSASDRWGPRT
Trigger: GGTCCTAGGCCCCCACCTGTCACTTGCGGAACTCCAGCAGGCCACAGAAGCTCCCCGGGCCCTCTTTAAATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000617965.2
CDS CAA 90 bp GGGTTTTTGATCTGGTTCAGCTGCTCCCGCACGTTGTTGGTGGTGTaGTCCTCAGAGGCTGAGTGTGTGTGGCTGCCCGGCTTCCGCCGC +
Preference number: 6 (lower is better)
Translates to: GFLIWFSCSRTLLVV*SSEAECVWLPGFRR
Trigger: GCGGCGGAAGCCGGGCAGCCACACACACTCAGCCTCTGAGGACAACACCACCAACAACGTGCGGGAGCAGCTGAACCAGATCAAAAACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254958.10
ENST00000423891.6
CDS CAA 90 bp GTGGACGCATCCCGGGTGTGGGATGCACTTATCACAGTACAGGCCTaGCCAGCCGTACTGGCACCTGGAGACACACAGCACACCTCCAGG +
Preference number: 6 (lower is better)
Translates to: VDASRVWDALITVQA*PAVLAPGDTQHTSR
Trigger: CCTGGAGGTGTGCTGTGTGTCTCCAGGTGCCAGTACGGCTGGCAAGGCCTGTACTGTGATAAGTGCATCCCACACCCGGGATGCGTCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617965.2
CDS GCA 72 bp CCCGGGTGTGGGATGCACTTATCACAGTACAGGCCTTaGCAGCCGTACTGGCACCTGCAGTCACCTGGGAGT +
Preference number: 6 (lower is better)
Translates to: PGCGMHLSQYRP*QPYWHLQSPGS
Trigger: ACTCCCAGGTGACTGCAGGTGCCAGTACGGCTGGCAAGGCCTGTACTGTGATAAGTGCATCCCACACCCGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254958.10
ENST00000423891.6
CDS GCA 72 bp AGGCTTGGGATCAGATCACAGCCATGCACCCACAGATaGGGCATTCCTAAGCCAAGGGCCTGGGCCAAGCCC +
Preference number: 6 (lower is better)
Translates to: RLGIRSQPCTHR*GIPKPRAWAKP
Trigger: GGGCTTGGCCCAGGCCCTTGGCTTAGGAATGCCGCATCTGTGGGTGCATGGCTGTGATCTGATCCCAAGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612857.1
CDS CAA 72 bp TCCCGGGTGTGGGATGCACTTATCACAGTACAGGCCTaGCCAGCCGTACTGGCACCTGCAGTCACCTGGGAG +
Preference number: 6 (lower is better)
Translates to: SRVWDALITVQA*PAVLAPAVTWE
Trigger: CTCCCAGGTGACTGCAGGTGCCAGTACGGCTGGCAAGGCCTGTACTGTGATAAGTGCATCCCACACCCGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254958.10
ENST00000423891.6
CDS TCA 72 bp TTCACGTTCTGCATGGACAGGATCTCCAACTCGAACTaGCCCGAGGCCCCACACACCTTGGCTCGCAGGGCA +
Preference number: 6 (lower is better)
Translates to: FTFCMDRISNSN*PEAPHTLARRA
Trigger: TGCCCTGCGAGCCAAGGTGTGTGGGGCCTCGGGTCAGTTCGAGTTGGAGATCCTGTCCATGCAGAACGTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS GCA 72 bp CCCGGGTGTGGGATGCACTTATCACAGTACAGGCCTTaGCAGCCGTACTGGCACCTGGAGACACACAGCACA +
Preference number: 6 (lower is better)
Translates to: PGCGMHLSQYRP*QPYWHLETHST
Trigger: TGTGCTGTGTGTCTCCAGGTGCCAGTACGGCTGGCAAGGCCTGTACTGTGATAAGTGCATCCCACACCCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617965.2
CDS CCA 72 bp AGTCAGAGGTGCACTTTGTCTTCACCGGCTGGAGACTaGAAGACCGACACTCGCCCACACCAGTGCAGGGGT +
Preference number: 6 (lower is better)
Translates to: SQRCTLSSPAGD*KTDTRPHQCRG
Trigger: ACCCCTGCACTGGTGTGGGCGAGTGTCGGTCTTCCAGTCTCCAGCCGGTGAAGACAAAGTGCACCTCTGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254958.10
ENST00000423891.6
CDS CCA 72 bp GGACTTACTTGTAGAGCATGTGGGGCCGGTCCAGCCTaGGGAACACTCACACTCAAAGCCCAGGGAGGTCTC +
Preference number: 6 (lower is better)
Translates to: GLTCRACGAGPA*GTLTLKAQGGL
Trigger: GAGACCTCCCTGGGCTTTGAGTGTGAGTGTTCCCCAGGCTGGACCGGCCCCACATGCTCTACAAGTAAGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617965.2
CDS CAA 72 bp TCCCGGGTGTGGGATGCACTTATCACAGTACAGGCCTaGCCAGCCGTACTGGCACCTGGAGACACACAGCAC +
Preference number: 6 (lower is better)
Translates to: SRVWDALITVQA*PAVLAPGDTQH
Trigger: GTGCTGTGTGTCTCCAGGTGCCAGTACGGCTGGCAAGGCCTGTACTGTGATAAGTGCATCCCACACCCGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617965.2
CDS TCA 72 bp GTGACAGGTGGGGGCCTAGGACCAGCACAGGCAATCTaGCCCCAGAAATCCACATCCATAACCACACCTGGG +
Preference number: 6 (lower is better)
Translates to: VTGGGLGPAQAI*PQKSTSITTPG
Trigger: CCCAGGTGTGGTTATGGATGTGGATTTCTGGGGTCAGATTGCCTGTGCTGGTCCTAGGCCCCCACCTGTCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000617965.2
CDS GCA 72 bp GGCTTCTCTTCTCTGTCTACCAGCGTGTACGCCGGCTaGTTGGCAAACCGGGCTTTCTGCTGGTGTTTGTCC +
Preference number: 6 (lower is better)
Translates to: GFSSLSTSVYAG*LANRAFCWCLS
Trigger: GGACAAACACCAGCAGAAAGCCCGGTTTGCCAAGCAGCCGGCGTACACGCTGGTAGACAGAGAAGAGAAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254958.10
ENST00000423891.6
CDS GCA 72 bp GAAGAGGCCACACTAGCGGCGGCAGTGCCCGCGGTCTaGTATACGATGTACTCCATTCGGTTTAAGCTCTGG +
Preference number: 6 (lower is better)
Translates to: EEATLAAAVPAV*YTMYSIRFKLW
Trigger: CCAGAGCTTAAACCGAATGGAGTACATCGTATAGCAGACCGCGGGCACTGCCGCCGCTAGTGTGGCCTCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423891.6
CDS CCA 72 bp TACATCCCAGAGCTCCCCAAAGAGTGGCAGACTCACTaGTTTCACAGTAGGCCCCCTCCCAGCCGTCACTAC +
Preference number: 6 (lower is better)
Translates to: YIPELPKEWQTH*FHSRPPPSRHY
Trigger: GTAGTGACGGCTGGGAGGGGGCCTACTGTGAAACCAGTGAGTCTGCCACTCTTTGGGGAGCTCTGGGATGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000613518.1
CDS CCA 72 bp TGGGCCAAGCCCACTTTCCTGGAGACAGGGACCCTCTaGCTAATGAGACACACCCCAGGGAAGCCAAGATAC +
Preference number: 6 (lower is better)
Translates to: WAKPTFLETGTL*LMRHTPGKPRY
Trigger: GTATCTTGGCTTCCCTGGGGTGTGTCTCATTAGCCAGAGGGTCCCTGTCTCCAGGAAAGTGGGCTTGGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612857.1
CDS CAA 90 bp TTCTCAATGGGGTTTTTGATCTGGTTCAGCTGCTCCCGCACGTTGTaGGTGGTGTTGTCCTCAGAGGCTGAGTGTGTGTGGCTGCCCGGC +
Preference number: 6 (lower is better)
Translates to: FSMGFLIWFSCSRTL*VVLSSEAECVWLPG
Trigger: GCCGGGCAGCCACACACACTCAGCCTCTGAGGACAACACCACCAACAACGTGCGGGAGCAGCTGAACCAGATCAAAAACCCCATTGAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254958.10
ENST00000423891.6
CDS GCA 72 bp ACTCACACTCAAAGCCCAGGGAGGTCTCCTTACAGCTaGCTCTGTTGTGACAGGGATCAGAGAGGCAGGCGT +
Preference number: 6 (lower is better)
Translates to: THTQSPGRSPYS*LCCDRDQRGRR
Trigger: ACGCCTGCCTCTCTGATCCCTGTCACAACAGAGGCAGCTGTAAGGAGACCTCCCTGGGCTTTGAGTGTGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254958.10
ENST00000423891.6
ENST00000617965.2
CDS GCA 72 bp CCACACAGGTGCCGCTGTTGTAACAGGGATGAGGGCTaGAGTCATTGGTATTCTGAGCACAGATGGGCCCCT +
Preference number: 6 (lower is better)
Translates to: PHRCRCCNRDEG*SHWYSEHRWAP
Trigger: AGGGGCCCATCTGTGCTCAGAATACCAATGACTGCAGCCCTCATCCCTGTTACAACAGCGGCACCTGTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254958.10
ENST00000423891.6
ENST00000617965.2
CDS GCA 72 bp CTCAGACTCTACCTAGCGGCGGCAGTGCCCGCGGTCTaGTATACGATGTACTCCATTCGGTTTAAGCTCTGG +
Preference number: 6 (lower is better)
Translates to: LRLYLAAAVPAV*YTMYSIRFKLW
Trigger: CCAGAGCTTAAACCGAATGGAGTACATCGTATAGCAGACCGCGGGCACTGCCGCCGCTAGGTAGAGTCTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS CCA 72 bp GGCCGCCGCGTCCCGGCTCTAATATACTCCGCCGATTaGAGCATGCACGACTGGAAAACAACACCACTTTTC +
Preference number: 6 (lower is better)
Translates to: GRRVPALIYSAD*SMHDWKTTPLF
Trigger: GAAAAGTGGTGTTGTTTTCCAGTCGTGCATGCTCCAATCGGCGGAGTATATTAGAGCCGGGACGCGGCGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS CCA 72 bp ATCAATGTTTGTAGAGCATGTGGGGCCGGTCCAGCCTaGGGAACACTCACACTCAAAGCCCAGGGAGGTCTC +
Preference number: 6 (lower is better)
Translates to: INVCRACGAGPA*GTLTLKAQGGL
Trigger: GAGACCTCCCTGGGCTTTGAGTGTGAGTGTTCCCCAGGCTGGACCGGCCCCACATGCTCTACAAACATTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254958.10
ENST00000423891.6
CDS CCA 72 bp TATACCGCACCCCTTCAGGTGTGTCGTTGGAAGCCATaGCCACTGTGCAGCTGTCAATCACTTCACAGGGGG +
Preference number: 6 (lower is better)
Translates to: YTAPLQVCRWKP*PLCSCQSLHRG
Trigger: CCCCCTGTGAAGTGATTGACAGCTGCACAGTGGCCATGGCTTCCAACGACACACCTGAAGGGGTGCGGTATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254958.10
ENST00000423891.6
ENST00000613518.1
ENST00000617965.2
CDS CCA 72 bp AGCAGTTTTCATGGCTCCCTCCTGACACAATGCACCTaGCACCTCCACCTGCTACCCTCCATCAGGGCTGTT +
Preference number: 6 (lower is better)
Translates to: SSFHGSLLTQCT*HLHLLPSIRAV
Trigger: AACAGCCCTGATGGAGGGTAGCAGGTGGAGGTGCCAGGTGCATTGTGTCAGGAGGGAGCCATGAAAACTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488480.2
CDS CCA 72 bp CAACATGACCCATACATCCCAGAGCTCCCCAAAGAGTaGCAGACTCACTGGTTTCACAGTAGGCCCCCTCCC +
Preference number: 6 (lower is better)
Translates to: QHDPYIPELPKE*QTHWFHSRPPP
Trigger: GGGAGGGGGCCTACTGTGAAACCAGTGAGTCTGCCACTCTTTGGGGAGCTCTGGGATGTATGGGTCATGTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000613518.1
CDS CAA 72 bp CGGCCGCCGCGTCCCGGCTCTAATATACTCCGCCGATaGGAGCATGCACGACTGGAAAACAACACCACTTTT +
Preference number: 6 (lower is better)
Translates to: RPPRPGSNILRR*EHARLENNTTF
Trigger: AAAAGTGGTGTTGTTTTCCAGTCGTGCATGCTCCAATCGGCGGAGTATATTAGAGCCGGGACGCGGCGGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS CAA 90 bp CCACAGACGTTGGAGGAAATATACCGCACCCCTTCAGGTGTGTCGTaGGAAGCCATGGCCACTGTGCAGCTGTCAATCACTTCACAGGGG +
Preference number: 6 (lower is better)
Translates to: PQTLEEIYRTPSGVS*EAMATVQLSITSQG
Trigger: CCCCTGTGAAGTGATTGACAGCTGCACAGTGGCCATGGCTTCCAACGACACACCTGAAGGGGTGCGGTATATTTCCTCCAACGTCTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254958.10
ENST00000423891.6
ENST00000613518.1
ENST00000617965.2
CDS TCA 72 bp CCCATTTGGCCCCATCTGGTATCACACTCCCCATGGTaGTGCAAGGTCTCCCTGAAACTTCCTGGCACTTGG +
Preference number: 6 (lower is better)
Translates to: PIWPHLVSHSPW*CKVSLKLPGTW
Trigger: CCAAGTGCCAGGAAGTTTCAGGGAGACCTTGCATCACCATGGGGAGTGTGATACCAGATGGGGCCAAATGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254958.10
ENST00000423891.6
ENST00000617965.2
CDS GCA 72 bp TGGCACCTGCAGTCACCTGGGAGTTTGCAAGACCCATaGTTAGGACTGCAGCCTTGTCGGCAAATAGCTCTG +
Preference number: 6 (lower is better)
Translates to: WHLQSPGSLQDP*LGLQPCRQIAL
Trigger: CAGAGCTATTTGCCGACAAGGCTGCAGTCCTAAGCATGGGTCTTGCAAACTCCCAGGTGACTGCAGGTGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254958.10
ENST00000423891.6
CDS GCA 72 bp ATTCGCACCGGTACCAGTTGTCTCCATCCACACAGGTaGCGCTGTTGTAACAGGGATGAGGGCTGCAGTCAT +
Preference number: 6 (lower is better)
Translates to: IRTGTSCLHPHR*RCCNRDEGCSH
Trigger: ATGACTGCAGCCCTCATCCCTGTTACAACAGCGGCACCTGTGTGGATGGAGACAACTGGTACCGGTGCGAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254958.10
ENST00000423891.6
ENST00000617965.2
CDS GCA 72 bp AGCGTGTACGCCGGCTGCTTGGCAAACCGGGCTTTCTaGTGGTGTTTGTCCATGTCGTCCTCTTCTACTTCA +
Preference number: 6 (lower is better)
Translates to: SVYAGCLANRAF*WCLSMSSSSTS
Trigger: TGAAGTAGAAGAGGACGACATGGACAAACACCAGCAGAAAGCCCGGTTTGCCAAGCAGCCGGCGTACACGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254958.10
ENST00000423891.6
CDS GCA 72 bp GATTCCACGAGGACGTTCCTTCCAAGAACAGATACATaGGCTACCTTAGTGGGACAGGATGGGGGTGCTGGG +
Preference number: 6 (lower is better)
Translates to: DSTRTFLPRTDT*ATLVGQDGGAG
Trigger: CCCAGCACCCCCATCCTGTCCCACTAAGGTAGCGCATGTATCTGTTCTTGGAAGGAACGTCCTCGTGGAATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000617965.2
CDS CCA 72 bp TCTCTTCTCTGTCTACCAGCGTGTACGCCGGCTGCTTaGCAAACCGGGCTTTCTGCTGGTGTTTGTCCATGT +
Preference number: 6 (lower is better)
Translates to: SLLCLPACTPAA*QTGLSAGVCPC
Trigger: ACATGGACAAACACCAGCAGAAAGCCCGGTTTGCCAAGCAGCCGGCGTACACGCTGGTAGACAGAGAAGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254958.10
ENST00000423891.6
CDS CCA 72 bp TATCACAGTACAGGCCTTGCCAGCCGTACTGGCACCTaGAGACACACAGCACACCTCCAGGTTAGCCTTTTG +
Preference number: 6 (lower is better)
Translates to: YHSTGLASRTGT*RHTAHLQVSLL
Trigger: CAAAAGGCTAACCTGGAGGTGTGCTGTGTGTCTCCAGGTGCCAGTACGGCTGGCAAGGCCTGTACTGTGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617965.2
CDS CAA 72 bp GGGTTTTTGATCTGGTTCAGCTGCTCCCGCACGTTGTaGGTGGTGTTGTCCTCAGAGGCTGAGTGTGTGTGG +
Preference number: 6 (lower is better)
Translates to: GFLIWFSCSRTL*VVLSSEAECVW
Trigger: CCACACACACTCAGCCTCTGAGGACAACACCACCAACAACGTGCGGGAGCAGCTGAACCAGATCAAAAACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254958.10
ENST00000423891.6
CDS CAA 72 bp TTCTCTTCTCTGTCTACCAGCGTGTACGCCGGCTGCTaGGCAAACCGGGCTTTCTGCTGGTGTTTGTCCATG +
Preference number: 6 (lower is better)
Translates to: FSSLSTSVYAGC*ANRAFCWCLSM
Trigger: CATGGACAAACACCAGCAGAAAGCCCGGTTTGCCAAGCAGCCGGCGTACACGCTGGTAGACAGAGAAGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254958.10
ENST00000423891.6
CDS CAA 90 bp TGTTTCTCAATGGGGTTTTTGATCTGGTTCAGCTGCTCCCGCACGTaGTTGGTGGTGTTGTCCTCAGAGGCTGAGTGTGTGTGGCTGCCC +
Preference number: 6 (lower is better)
Translates to: CFSMGFLIWFSCSRT*LVVLSSEAECVWLP
Trigger: GGGCAGCCACACACACTCAGCCTCTGAGGACAACACCACCAACAACGTGCGGGAGCAGCTGAACCAGATCAAAAACCCCATTGAGAAACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254958.10
ENST00000423891.6
CDS GCA 72 bp TCACTAGAAGATAGGCTTGGGATCAGATCACAGCCATaGACCCACAGATGCGGCATTCCTAAGCCAAGGGCC +
Preference number: 6 (lower is better)
Translates to: SLEDRLGIRSQP*THRCGIPKPRA
Trigger: GGCCCTTGGCTTAGGAATGCCGCATCTGTGGGTGCATGGCTGTGATCTGATCCCAAGCCTATCTTCTAGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612857.1
CDS GCA 72 bp CCCCTTCAGGTGTGTCGTTGGAAGCCATGGCCACTGTaGAGCTGTCAATCACTAGAAGATAGGCTTGGGATC +
Preference number: 6 (lower is better)
Translates to: PLQVCRWKPWPL*SCQSLEDRLGI
Trigger: GATCCCAAGCCTATCTTCTAGTGATTGACAGCTGCACAGTGGCCATGGCTTCCAACGACACACCTGAAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612857.1
CDS CCA 72 bp ACTGACTCTTGCACTTCCCGTGAGGACCACAGACGTTaGAGGAAATATACCGCACCCCTTCAGGTGTGTCGT +
Preference number: 6 (lower is better)
Translates to: TDSCTSREDHRR*RKYTAPLQVCR
Trigger: ACGACACACCTGAAGGGGTGCGGTATATTTCCTCCAACGTCTGTGGTCCTCACGGGAAGTGCAAGAGTCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254958.10
ENST00000423891.6
ENST00000612857.1
ENST00000613518.1
ENST00000617965.2
CDS CCA 72 bp CAGACCTTTGAGCAGGCGATCCGTCCATTCAGGCACTaGCAGGTATTACAGTCATCATCCCATTTGGCCCCA +
Preference number: 6 (lower is better)
Translates to: QTFEQAIRPFRH*QVLQSSSHLAP
Trigger: TGGGGCCAAATGGGATGATGACTGTAATACCTGCCAGTGCCTGAATGGACGGATCGCCTGCTCAAAGGTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254958.10
ENST00000423891.6
ENST00000617965.2
CDS CAA 72 bp ATGGGGTTTTTGATCTGGTTCAGCTGCTCCCGCACGTaGTTGGTGGTGTTGTCCTCAGAGGCTGAGTGTGTG +
Preference number: 6 (lower is better)
Translates to: MGFLIWFSCSRT*LVVLSSEAECV
Trigger: CACACACTCAGCCTCTGAGGACAACACCACCAACAACGTGCGGGAGCAGCTGAACCAGATCAAAAACCCCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254958.10
ENST00000423891.6
CDS CAA 90 bp GGTGATACAAAAGCAGACATCAAACAGCTCTGCTTCTGGTTTCCATaGCAAGTCCCCAAGGGTGTCAGGATCTGCTCCGACAGCCCTGGG +
Preference number: 6 (lower is better)
Translates to: GDTKADIKQLCFWFP*QVPKGVRICSDSPG
Trigger: CCCAGGGCTGTCGGAGCAGATCCTGACACCCTTGGGGACTTGCAATGGAAACCAGAAGCAGAGCTGTTTGATGTCTGCTTTTGTATCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488480.2
CDS TCA 72 bp CAGTTGGGTCCTGAATACCCCTCAGGGCAGGAACACTaGTATTTGTCAGGGCCTGTGTTGCTACAAGTTCCC +
Preference number: 6 (lower is better)
Translates to: QLGPEYPSGQEH*YLSGPVLLQVP
Trigger: GGGAACTTGTAGCAACACAGGCCCTGACAAATATCAGTGTTCCTGCCCTGAGGGGTATTCAGGACCCAACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254958.10
ENST00000423891.6
ENST00000617965.2
CDS TCA 72 bp GAGGCAGGCGTGCTCAGCAATTTCACAGTTGGGTCCTaGATACCCCTCAGGGCAGGAACACTGATATTTGTC +
Preference number: 6 (lower is better)
Translates to: EAGVLSNFTVGS*IPLRAGTLIFV
Trigger: GACAAATATCAGTGTTCCTGCCCTGAGGGGTATTCAGGACCCAACTGTGAAATTGCTGAGCACGCCTGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254958.10
ENST00000423891.6
ENST00000617965.2
CDS TCA 72 bp CCTCCCAGCCGTCACTACAGATGCACTTGTAGGAGTTaGCACCATCGATGCAAGTGCCACCGTTTCTACAAG +
Preference number: 6 (lower is better)
Translates to: PPSRHYRCTCRS*HHRCKCHRFYK
Trigger: CTTGTAGAAACGGTGGCACTTGCATCGATGGTGTCAACTCCTACAAGTGCATCTGTAGTGACGGCTGGGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254958.10
ENST00000423891.6
ENST00000488480.2
ENST00000612857.1
ENST00000613518.1
ENST00000617965.2
CDS TCA 72 bp GTCTGCCACTGCCGGCTGGGGTTGATCATGCCCGAGTaGGAAGCCTTTTCAATAATACTGTCAGGTTCTCAG +
Preference number: 6 (lower is better)
Translates to: VCHCRLGLIMPE*EAFSIILSGSQ
Trigger: CTGAGAACCTGACAGTATTATTGAAAAGGCTTCTCACTCGGGCATGATCAACCCCAGCCGGCAGTGGCAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423891.6
CDS GCA 72 bp TCTGTTCTTCAGAGGCCGCCTCTGAACTCTTACTTCTaGAACGGCAGCAATCAGCGAGCTGTTTCCATCACG +
Preference number: 6 (lower is better)
Translates to: SVLQRPPLNSYF*NGSNQRAVSIT
Trigger: CGTGATGGAAACAGCTCGCTGATTGCTGCCGTTGCAGAAGTAAGAGTTCAGAGGCGGCCTCTGAAGAACAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254958.10
ENST00000423891.6
ENST00000617357.1
CDS GCA 72 bp AACATCCTAGAACCCCAAAATCGGGCTACCTGGAAATaGAGACAACTGTGGGTAGCTCTGGACAAGCCCTGG +
Preference number: 6 (lower is better)
Translates to: NILEPQNRATWK*RQLWVALDKPW
Trigger: CCAGGGCTTGTCCAGAGCTACCCACAGTTGTCTGCATTTCCAGGTAGCCCGATTTTGGGGTTCTAGGATGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423891.6
CDS CCA 72 bp TGGAGGAAATATACCGCACCCCTTCAGGTGTGTCGTTaGAAGCCATGGCCACTGTGCAGCTGTCAATCACTT +
Preference number: 6 (lower is better)
Translates to: WRKYTAPLQVCR*KPWPLCSCQSL
Trigger: AAGTGATTGACAGCTGCACAGTGGCCATGGCTTCCAACGACACACCTGAAGGGGTGCGGTATATTTCCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254958.10
ENST00000423891.6
ENST00000613518.1
ENST00000617965.2
CDS CCA 72 bp GCAGGTATTACAGTCATCATCCCATTTGGCCCCATCTaGTATCACACTCCCCATGGTGATGCAAGGTCTCCC +
Preference number: 6 (lower is better)
Translates to: AGITVIIPFGPI*YHTPHGDARSP
Trigger: GGGAGACCTTGCATCACCATGGGGAGTGTGATACCAGATGGGGCCAAATGGGATGATGACTGTAATACCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254958.10
ENST00000423891.6
ENST00000617965.2
CDS CCA 72 bp TATACCGCACCCCTTCAGGTGTGTCGTTGGAAGCCATaGCCACTGTGCAGCTGTCAATCACTAGAAGATAGG +
Preference number: 6 (lower is better)
Translates to: YTAPLQVCRWKP*PLCSCQSLEDR
Trigger: CCTATCTTCTAGTGATTGACAGCTGCACAGTGGCCATGGCTTCCAACGACACACCTGAAGGGGTGCGGTATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612857.1
CDS CCA 72 bp TGGAGGAAATATACCGCACCCCTTCAGGTGTGTCGTTaGAAGCCATGGCCACTGTGCAGCTGTCAATCACTA +
Preference number: 6 (lower is better)
Translates to: WRKYTAPLQVCR*KPWPLCSCQSL
Trigger: TAGTGATTGACAGCTGCACAGTGGCCATGGCTTCCAACGACACACCTGAAGGGGTGCGGTATATTTCCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612857.1
CDS CCA 72 bp AAGAACAGATACATGCGCTACCTTAGTGGGACAGGATaGGGGTGCTGGGAGACTTCCAAACACACAAGCCAC +
Preference number: 6 (lower is better)
Translates to: KNRYMRYLSGTG*GCWETSKHTSH
Trigger: GTGGCTTGTGTGTTTGGAAGTCTCCCAGCACCCCCATCCTGTCCCACTAAGGTAGCGCATGTATCTGTTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617965.2
CDS CCA 72 bp CTGCACTGCAGAATTCCAGAAGTTTATCAAAGACCATaGACTCCCCGATTCTGGAGGGAATCTGGGGGACCC +
Preference number: 6 (lower is better)
Translates to: LHCRIPEVYQRP*TPRFWRESGGP
Trigger: GGGTCCCCCAGATTCCCTCCAGAATCGGGGAGTCCATGGTCTTTGATAAACTTCTGGAATTCTGCAGTGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000617965.2
CDS CAA 72 bp TTGGAGGAAATATACCGCACCCCTTCAGGTGTGTCGTaGGAAGCCATGGCCACTGTGCAGCTGTCAATCACT +
Preference number: 6 (lower is better)
Translates to: LEEIYRTPSGVS*EAMATVQLSIT
Trigger: AGTGATTGACAGCTGCACAGTGGCCATGGCTTCCAACGACACACCTGAAGGGGTGCGGTATATTTCCTCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254958.10
ENST00000423891.6
ENST00000612857.1
ENST00000613518.1
ENST00000617965.2
CDS CAA 90 bp AGAAGGCAAAGAGCCCGGCCTCCTTTTATTATTCTGATCGCTTCTTaGAGACGCTCCCCCTCCTCTTCCACCTCCCGGCTTTCTTTCCTT +
Preference number: 6 (lower is better)
Translates to: RRQRARPPFIILIAS*RRSPSSSTSRLSFL
Trigger: AAGGAAAGAAAGCCGGGAGGTGGAAGAGGAGGGGGAGCGTCTCAAAGAAGCGATCAGAATAATAAAAGGAGGCCGGGCTCTTTGCCTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000254958.10
CDS CAA 90 bp ATCCGTCCATTCAGGCACTGGCAGGTATTACAGTCATCATCCCATTaGGCCCCATCTGGTATCACACTCCCCATGGTGATGCAAGGTCTC +
Preference number: 6 (lower is better)
Translates to: IRPFRHWQVLQSSSH*APSGITLPMVMQGL
Trigger: GAGACCTTGCATCACCATGGGGAGTGTGATACCAGATGGGGCCAAATGGGATGATGACTGTAATACCTGCCAGTGCCTGAATGGACGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254958.10
ENST00000423891.6
ENST00000617965.2
CDS CAA 90 bp ACCCAGAGCTGGGAACTGAGACGCCATCTGTCTCCACTTATCTTATaGGCGACTTTCTCATGCCCAGGTCAGGGCTGTATCCCATCAAGT +
Preference number: 6 (lower is better)
Translates to: TQSWELRRHLSPLIL*ATFSCPGQGCIPSS
Trigger: ACTTGATGGGATACAGCCCTGACCTGGGCATGAGAAAGTCGCCAATAAGATAAGTGGAGACAGATGGCGTCTCAGTTCCCAGCTCTGGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488480.2
CDS GCA 72 bp TGTTCGCACAGTTATCCTGGTAATAGGAGTCAGAGGTaGACTTTGTCTTCACCGGCTGGAGACTGGAAGACC +
Preference number: 6 (lower is better)
Translates to: CSHSYPGNRSQR*TLSSPAGDWKT
Trigger: GGTCTTCCAGTCTCCAGCCGGTGAAGACAAAGTGCACCTCTGACTCCTATTACCAGGATAACTGTGCGAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254958.10
ENST00000423891.6
CDS GCA 72 bp CCATGTTTCTCAATGGGGTTTTTGATCTGGTTCAGCTaGTCCCGCACGTTGTTGGTGGTGTTGTCCTCAGAG +
Preference number: 6 (lower is better)
Translates to: PCFSMGFLIWFS*SRTLLVVLSSE
Trigger: CTCTGAGGACAACACCACCAACAACGTGCGGGAGCAGCTGAACCAGATCAAAAACCCCATTGAGAAACATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254958.10
ENST00000423891.6
CDS GCA 72 bp CCTGGGGTGCTGATGACAGCGGTTCTCAGACCTGGCTaGACTGCAGAATTCCAGAAGTTTATCAAAGACCAT +
Preference number: 6 (lower is better)
Translates to: PGVLMTAVLRPG*TAEFQKFIKDH
Trigger: ATGGTCTTTGATAAACTTCTGGAATTCTGCAGTGCAGCCAGGTCTGAGAACCGCTGTCATCAGCACCCCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617965.2
CDS CCA 72 bp TTCACACTGGACAAGCCTAGGTACCTCTCCCCAGCGTaGTATCTTGGCACAAGGATCCTTAGAATGGACACA +
Preference number: 6 (lower is better)
Translates to: FTLDKPRYLSPA*YLGTRILRMDT
Trigger: TGTGTCCATTCTAAGGATCCTTGTGCCAAGATACCACGCTGGGGAGAGGTACCTAGGCTTGTCCAGTGTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617965.2
CDS CCA 72 bp CACACCTGGGGTGCTGATGACAGCGGTTCTCAGACCTaGCTGCACTGCAGAATTCCAGAAGTTTATCAAAGA +
Preference number: 6 (lower is better)
Translates to: HTWGADDSGSQT*LHCRIPEVYQR
Trigger: TCTTTGATAAACTTCTGGAATTCTGCAGTGCAGCCAGGTCTGAGAACCGCTGTCATCAGCACCCCAGGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617965.2
CDS CAA 72 bp TTCAGGCACTGGCAGGTATTACAGTCATCATCCCATTaGGCCCCATCTGGTATCACACTCCCCATGGTGATG +
Preference number: 6 (lower is better)
Translates to: FRHWQVLQSSSH*APSGITLPMVM
Trigger: CATCACCATGGGGAGTGTGATACCAGATGGGGCCAAATGGGATGATGACTGTAATACCTGCCAGTGCCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254958.10
ENST00000423891.6
ENST00000617965.2
CDS CAA 72 bp CACAGTTATCCTGGTAATAGGAGTCAGAGGTGCACTTaGTCTTCACCGGCTGGAGACTGGAAGACCGACACT +
Preference number: 6 (lower is better)
Translates to: HSYPGNRSQRCT*SSPAGDWKTDT
Trigger: AGTGTCGGTCTTCCAGTCTCCAGCCGGTGAAGACAAAGTGCACCTCTGACTCCTATTACCAGGATAACTGTG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254958.10
ENST00000423891.6
CDS CAA 72 bp TCTGGGCACTTTCCAAGTCTCTGTTGTCCTGTTTGTTaGTCCAGTTTGGGTGTTTTGTCGGCGTGCCGTTGG +
Preference number: 6 (lower is better)
Translates to: SGHFPSLCCPVC*SSLGVLSACRW
Trigger: CCAACGGCACGCCGACAAAACACCCAAACTGGACAAACAAACAGGACAACAGAGACTTGGAAAGTGCCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254958.10
ENST00000423891.6
CDS CAA 72 bp AAAGCAGACATCAAACAGCTCTGCTTCTGGTTTCCATaGCAAGTCCCCAAGGGTGTCAGGATCTGCTCCGAC +
Preference number: 6 (lower is better)
Translates to: KADIKQLCFWFP*QVPKGVRICSD
Trigger: GTCGGAGCAGATCCTGACACCCTTGGGGACTTGCAATGGAAACCAGAAGCAGAGCTGTTTGATGTCTGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488480.2
CDS CAA 90 bp CATTCACACTGGACAAGCCTAGGTACCTCTCCCCAGCGTGGTATCTaGGCACAAGGATCCTTAGAATGGACACAGGCTGAAAATTGGACT +
Preference number: 6 (lower is better)
Translates to: HSHWTSLGTSPQRGI*AQGSLEWTQAENWT
Trigger: AGTCCAATTTTCAGCCTGTGTCCATTCTAAGGATCCTTGTGCCAAGATACCACGCTGGGGAGAGGTACCTAGGCTTGTCCAGTGTGAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617965.2
CDS GCA 72 bp AGACAGGCGGCTTATCAAGCAGAAGCTTCCAGAGAGTaGCTTACCCACTTAATGCCCTCACATGGGCATTTA +
Preference number: 6 (lower is better)
Translates to: RQAAYQAEASRE*LTHLMPSHGHL
Trigger: TAAATGCCCATGTGAGGGCATTAAGTGGGTAAGGCACTCTCTGGAAGCTTCTGCTTGATAAGCCGCCTGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488480.2
CDS GCA 72 bp GACCCAGGTGATACAAAAGCAGACATCAAACAGCTCTaGTTCTGGTTTCCATTGCAAGTCCCCAAGGGTGTC +
Preference number: 6 (lower is better)
Translates to: DPGDTKADIKQL*FWFPLQVPKGV
Trigger: GACACCCTTGGGGACTTGCAATGGAAACCAGAAGCAGAGCTGTTTGATGTCTGCTTTTGTATCACCTGGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488480.2
CDS GCA 72 bp GGTGCTGATGACAGCGGTTCTCAGACCTGGCTGCACTaGAGAATTCCAGAAGTTTATCAAAGACCATGGACT +
Preference number: 6 (lower is better)
Translates to: GADDSGSQTWLH*RIPEVYQRPWT
Trigger: AGTCCATGGTCTTTGATAAACTTCTGGAATTCTGCAGTGCAGCCAGGTCTGAGAACCGCTGTCATCAGCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617965.2
CDS CCA 72 bp GAGGTCTCTCACATGTCCCTAACAAGTATACTGACCTaGCTCTTATCACAGGCCAGGATCAACCTCAAGCTG +
Preference number: 6 (lower is better)
Translates to: EVSHMSLTSILT*LLSQARINLKL
Trigger: CAGCTTGAGGTTGATCCTGGCCTGTGATAAGAGCCAGGTCAGTATACTTGTTAGGGACATGTGAGAGACCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423891.6
CDS CCA 72 bp TGGCTAATGAGACACACCCCAGGGAAGCCAAGATACTaGCAACGTGCCACATCACATTATGACAGGCAAAGT +
Preference number: 6 (lower is better)
Translates to: WLMRHTPGKPRY*QRATSHYDRQS
Trigger: ACTTTGCCTGTCATAATGTGATGTGGCACGTTGCCAGTATCTTGGCTTCCCTGGGGTGTGTCTCATTAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612857.1
CDS CCA 72 bp CCAGAAGTTTATCAAAGACCATGGACTCCCCGATTCTaGAGGGAATCTGGGGGACCCAGAGATTTACACTGT +
Preference number: 6 (lower is better)
Translates to: PEVYQRPWTPRF*RESGGPRDLHC
Trigger: ACAGTGTAAATCTCTGGGTCCCCCAGATTCCCTCCAGAATCGGGGAGTCCATGGTCTTTGATAAACTTCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000617965.2
CDS CCA 72 bp AGACACCTGCTACAAGGAAAGCTACAGCAGGACAAGTaGGACGGTGACGATAAGGCCGAAGCCTTGATTTTA +
Preference number: 6 (lower is better)
Translates to: RHLLQGKLQQDK*DGDDKAEALIL
Trigger: TAAAATCAAGGCTTCGGCCTTATCGTCACCGTCCCACTTGTCCTGCTGTAGCTTTCCTTGTAGCAGGTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617965.2
CDS CAA 90 bp ATGTACTCCATTCGGTTTAAGCTCTGGGCACTTTCCAAGTCTCTGTaGTCCTGTTTGTTTGTCCAGTTTGGGTGTTTTGTCGGCGTGCCG +
Preference number: 6 (lower is better)
Translates to: MYSIRFKLWALSKSL*SCLFVQFGCFVGVP
Trigger: CGGCACGCCGACAAAACACCCAAACTGGACAAACAAACAGGACAACAGAGACTTGGAAAGTGCCCAGAGCTTAAACCGAATGGAGTACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254958.10
ENST00000423891.6
CDS TCA 72 bp TCCAGCCGGGAAGACAGTCGCAGTAGTAGCTGGCAATaGGATTCTTACAGGATTTGGCGTTTACACAAGGTT +
Preference number: 6 (lower is better)
Translates to: SSREDSRSSSWQ*DSYRIWRLHKV
Trigger: AACCTTGTGTAAACGCCAAATCCTGTAAGAATCTCATTGCCAGCTACTACTGCGACTGTCTTCCCGGCTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254958.10
ENST00000423891.6
ENST00000617965.2
ENST00000622545.1
CDS TCA 72 bp GTGGTTAGAGGAATTTCTATGTGCATGCCTTCAAAATaGCTCCCACGAGGCTGGGGTAACATAAGCCCTAGC +
Preference number: 6 (lower is better)
Translates to: VVRGISMCMPSK*LPRGWGNISPS
Trigger: GCTAGGGCTTATGTTACCCCAGCCTCGTGGGAGTCATTTTGAAGGCATGCACATAGAAATTCCTCTAACCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620743.1
CDS TCA 72 bp TCTCTCACAGTGATCGCCCGACAGGAGGCGTCATTCTaGCACTGGCCAAGGCAGTCATTAATATTTATGTCA +
Preference number: 6 (lower is better)
Translates to: SLTVIARQEASF*HWPRQSLIFMS
Trigger: TGACATAAATATTAATGACTGCCTTGGCCAGTGTCAGAATGACGCCTCCTGTCGGGCGATCACTGTGAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622545.1
CDS GCA 72 bp GTCCAAAGAAGTCATCTCTGGGGCGGCAGAACTTATTaGAGCCAAAGCCATAGTAGTAGTCATCACAGGTCA +
Preference number: 6 (lower is better)
Translates to: VQRSHLWGGRTY*SQSHSSSHHRS
Trigger: TGACCTGTGATGACTACTACTATGGCTTTGGCTGCAATAAGTTCTGCCGCCCCAGAGATGACTTCTTTGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254958.10
ENST00000423891.6
CDS CCA 72 bp GGTGATACAAAAGCAGACATCAAACAGCTCTGCTTCTaGTTTCCATTGCAAGTCCCCAAGGGTGTCAGGATC +
Preference number: 6 (lower is better)
Translates to: GDTKADIKQLCF*FPLQVPKGVRI
Trigger: GATCCTGACACCCTTGGGGACTTGCAATGGAAACCAGAAGCAGAGCTGTTTGATGTCTGCTTTTGTATCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488480.2
CDS CCA 72 bp TTAAATCCGTTAACCAGGTCCTGGCAGGTGCCCCCGTaGGAACAGTTATTAGGAGAACAGTCATCAATGTCT +
Preference number: 6 (lower is better)
Translates to: LNPLTRSWQVPP*EQLLGEQSSMS
Trigger: AGACATTGATGACTGTTCTCCTAATAACTGTTCCCACGGGGGCACCTGCCAGGACCTGGTTAACGGATTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000617965.2
CDS CAA 90 bp CGTACTGGCACCTGGAGACACACAGCACACCTCCAGGTTAGCCTTTaGAACGTTAAGAGACACCTGTACAATTCAAATGGAAGACTGCAA +
Preference number: 6 (lower is better)
Translates to: RTGTWRHTAHLQVSL*NVKRHLYNSNGRLQ
Trigger: TTGCAGTCTTCCATTTGAATTGTACAGGTGTCTCTTAACGTTCAAAAGGCTAACCTGGAGGTGTGCTGTGTGTCTCCAGGTGCCAGTACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617965.2
CDS TCA 72 bp TGTATTCCACAAACACAGGGCTTCAGCGGTTTAGCATaGCTGTTGCGGTTTAGCTGGTTCACTGAAATAGCC +
Preference number: 6 (lower is better)
Translates to: CIPQTQGFSGLA*LLRFSWFTEIA
Trigger: GGCTATTTCAGTGAACCAGCTAAACCGCAACAGTCATGCTAAACCGCTGAAGCCCTGTGTTTGTGGAATACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620743.1
CDS CCA 72 bp TTAAATCCGTTAACCAGGTCCTGGCAGGTGCCCCCGTaGGAACAGTTATTAGGAGAACAGTCATCAATGTTT +
Preference number: 6 (lower is better)
Translates to: LNPLTRSWQVPP*EQLLGEQSSMF
Trigger: AAACATTGATGACTGTTCTCCTAATAACTGTTCCCACGGGGGCACCTGCCAGGACCTGGTTAACGGATTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254958.10
ENST00000423891.6
CDS TCA 72 bp GAAGCCAAGATACTGGCAACGTGCCACATCACATTATaGCAGGCAAAGTTGAGACTCCAGGCAAAGAGTTTT +
Preference number: 6 (lower is better)
Translates to: EAKILATCHITL*QAKLRLQAKSF
Trigger: AAAACTCTTTGCCTGGAGTCTCAACTTTGCCTGTCATAATGTGATGTGGCACGTTGCCAGTATCTTGGCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612857.1
CDS TCA 72 bp CCTGGAGACACACAGCACACCTCCAGGTTAGCCTTTTaGACGTTAAGAGACACCTGTACAATTCAAATGGAA +
Preference number: 6 (lower is better)
Translates to: PGDTQHTSRLAF*TLRDTCTIQME
Trigger: TTCCATTTGAATTGTACAGGTGTCTCTTAACGTTCAAAAGGCTAACCTGGAGGTGTGCTGTGTGTCTCCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617965.2
CDS GCA 72 bp GAGACACAAGTGATACTGTCCCAGTGCAGAAATCACTaGGGTCTTGCTTCCAGAGATTTCCAGTACAAAGAA +
Preference number: 6 (lower is better)
Translates to: ETQVILSQCRNH*GLASRDFQYKE
Trigger: TTCTTTGTACTGGAAATCTCTGGAAGCAAGACCGCAGTGATTTCTGCACTGGGACAGTATCACTTGTGTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613518.1
CDS CAA 72 bp ACCTGGAGACACACAGCACACCTCCAGGTTAGCCTTTaGAACGTTAAGAGACACCTGTACAATTCAAATGGA +
Preference number: 6 (lower is better)
Translates to: TWRHTAHLQVSL*NVKRHLYNSNG
Trigger: TCCATTTGAATTGTACAGGTGTCTCTTAACGTTCAAAAGGCTAACCTGGAGGTGTGCTGTGTGTCTCCAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617965.2
CDS GCA 72 bp TTTGCTCCATTCAGACACTGGTTAACCGAACTGCCTTaGCATCGAATAATGAGGTGTGAATGGGTCTTATAC +
Preference number: 6 (lower is better)
Translates to: FAPFRHWLTELP*HRIMRCEWVLY
Trigger: GTATAAGACCCATTCACACCTCATTATTCGATGGCAAGGCAGTTCGGTTAACCAGTGTCTGAATGGAGCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617357.1
CDS CCA 72 bp GTCTGCTATACGATGTACTCCATTCGGTTTAAGCTCTaGGCACTTTCCAAGTCTCTGTTGTCCTGTTTGTTT +
Preference number: 6 (lower is better)
Translates to: VCYTMYSIRFKL*ALSKSLLSCLF
Trigger: AAACAAACAGGACAACAGAGACTTGGAAAGTGCCCAGAGCTTAAACCGAATGGAGTACATCGTATAGCAGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254958.10
ENST00000423891.6
CDS CCA 72 bp GTCGTAGTTAACACCAGCAAAATACCTTTGCTAAATTaGAACCAGGCCCGCACCACACTTAGTTTCATTTGC +
Preference number: 6 (lower is better)
Translates to: VVVNTSKIPLLN*NQARTTLSFIC
Trigger: GCAAATGAAACTAAGTGTGGTGCGGGCCTGGTTCCAATTTAGCAAAGGTATTTTGCTGGTGTTAACTACGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488480.2
CDS CAA 72 bp ATTCGGTTTAAGCTCTGGGCACTTTCCAAGTCTCTGTaGTCCTGTTTGTTTGTCCAGTTTGGGTGTTTTGTC +
Preference number: 6 (lower is better)
Translates to: IRFKLWALSKSL*SCLFVQFGCFV
Trigger: GACAAAACACCCAAACTGGACAAACAAACAGGACAACAGAGACTTGGAAAGTGCCCAGAGCTTAAACCGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254958.10
ENST00000423891.6
CDS CAA 72 bp GTGGAAAACCTTATTCCTCTCATTTGCTTACAGAGTTaGCCCAAAATAGCACACCTAGAGGCTGCATTCTCC +
Preference number: 6 (lower is better)
Translates to: VENLIPLICLQS*PKIAHLEAAFS
Trigger: GGAGAATGCAGCCTCTAGGTGTGCTATTTTGGGCAAACTCTGTAAGCAAATGAGAGGAATAAGGTTTTCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617965.2
CDS CAA 90 bp TCTTTACAGGTGGAAAACCTTATTCCTCTCATTTGCTTACAGAGTTaGCCCAAAATAGCACACCTAGAGGCTGCATTCTCCACTTCTGCT +
Preference number: 6 (lower is better)
Translates to: SLQVENLIPLICLQS*PKIAHLEAAFSTSA
Trigger: AGCAGAAGTGGAGAATGCAGCCTCTAGGTGTGCTATTTTGGGCAAACTCTGTAAGCAAATGAGAGGAATAAGGTTTTCCACCTGTAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617965.2
CDS TCA 72 bp AGCAAAGATTTACATACCCGACAGGAGGCGTCATTCTaGCACTGGCCAAGGCAGTCATTAATATTTATGTCA +
Preference number: 6 (lower is better)
Translates to: SKDLHTRQEASF*HWPRQSLIFMS
Trigger: TGACATAAATATTAATGACTGCCTTGGCCAGTGTCAGAATGACGCCTCCTGTCGGGTATGTAAATCTTTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620743.1
CDS CCA 72 bp AAGCTTTTTGTCAGTGAATTTGCTCCATTCAGACACTaGTTAACCGAACTGCCTTGCCATCGAATAATGAGG +
Preference number: 6 (lower is better)
Translates to: KLFVSEFAPFRH*LTELPCHRIMR
Trigger: CCTCATTATTCGATGGCAAGGCAGTTCGGTTAACCAGTGTCTGAATGGAGCAAATTCACTGACAAAAAGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000617357.1
CDS CAA 90 bp CCATCACGTTTACTAACAAGATCGATTATTTTGTCAGTGATTTCCTaGATCGGGTTCCCATCATCCCGTATATCTTCAGCAGAAATGGCC +
Preference number: 6 (lower is better)
Translates to: PSRLLTRSIILSVIS*IGFPSSRISSAEMA
Trigger: GGCCATTTCTGCTGAAGATATACGGGATGATGGGAACCCGATCAAGGAAATCACTGACAAAATAATCGATCTTGTTAGTAAACGTGATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254958.10
ENST00000423891.6
CDS TCA 72 bp GTTAACCGAACTGCCTTGCCATCGAATAATGAGGTGTaGATGGGTCTTATACTTACAATGGCCACATGTATT +
Preference number: 6 (lower is better)
Translates to: VNRTALPSNNEV*MGLILTMATCI
Trigger: AATACATGTGGCCATTGTAAGTATAAGACCCATTCACACCTCATTATTCGATGGCAAGGCAGTTCGGTTAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617357.1
CDS CCA 72 bp CGAATAATGAGGTGTGAATGGGTCTTATACTTACAATaGCCACATGTATTTCATTGTTCGCTGAAGGGGAAG +
Preference number: 6 (lower is better)
Translates to: RIMRCEWVLYLQ*PHVFHCSLKGK
Trigger: CTTCCCCTTCAGCGAACAATGAAATACATGTGGCCATTGTAAGTATAAGACCCATTCACACCTCATTATTCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617357.1
CDS CCA 72 bp ACCGAACTGCCTTGCCATCGAATAATGAGGTGTGAATaGGTCTTATACTTACAATGGCCACATGTATTTCAT +
Preference number: 6 (lower is better)
Translates to: TELPCHRIMRCE*VLYLQWPHVFH
Trigger: ATGAAATACATGTGGCCATTGTAAGTATAAGACCCATTCACACCTCATTATTCGATGGCAAGGCAGTTCGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617357.1
CDS CAA 72 bp ATGAGATTCTTACAGGATTTGGCGTTTACACAAGGTTaGGCCTCACATTCATTTGCATCTAACTGGCACGTT +
Preference number: 6 (lower is better)
Translates to: MRFLQDLAFTQG*ASHSFASNWHV
Trigger: AACGTGCCAGTTAGATGCAAATGAATGTGAGGCCAAACCTTGTGTAAACGCCAAATCCTGTAAGAATCTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254958.10
ENST00000423891.6
ENST00000617965.2
CDS CAA 72 bp ACACCATCGATGCAAGTGCCACCGTTTCTACAAGGGTaGCTCTCACAGTCATTAATATCTATGAAACAAAGT +
Preference number: 6 (lower is better)
Translates to: TPSMQVPPFLQG*LSQSLISMKQS
Trigger: ACTTTGTTTCATAGATATTAATGACTGTGAGAGCAACCCTTGTAGAAACGGTGGCACTTGCATCGATGGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488480.2
CDS CAA 72 bp AATGATAAAGTCGTAGTTAACACCAGCAAAATACCTTaGCTAAATTGGAACCAGGCCCGCACCACACTTAGT +
Preference number: 6 (lower is better)
Translates to: NDKVVVNTSKIP*LNWNQARTTLS
Trigger: ACTAAGTGTGGTGCGGGCCTGGTTCCAATTTAGCAAAGGTATTTTGCTGGTGTTAACTACGACTTTATCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488480.2
CDS CAA 90 bp ATCAGCGAGCTGTTTCCATCACGTTTACTAACAAGATCGATTATTTaGTCAGTGATTTCCTTGATCGGGTTCCCATCATCCCGTATATCT +
Preference number: 6 (lower is better)
Translates to: ISELFPSRLLTRSII*SVISLIGFPSSRIS
Trigger: AGATATACGGGATGATGGGAACCCGATCAAGGAAATCACTGACAAAATAATCGATCTTGTTAGTAAACGTGATGGAAACAGCTCGCTGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254958.10
ENST00000423891.6
ENST00000617357.1
CDS CAA 90 bp CCATCACGTTTACTAACAAGATCGATTATTTTGTCAGTGATTTCCTaGATCGGGTTCCCATCATCCCGTATATCTTCAGCAGACTGGAAA +
Preference number: 6 (lower is better)
Translates to: PSRLLTRSIILSVIS*IGFPSSRISSADWK
Trigger: TTTCCAGTCTGCTGAAGATATACGGGATGATGGGAACCCGATCAAGGAAATCACTGACAAAATAATCGATCTTGTTAGTAAACGTGATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617357.1
CDS GCA 72 bp AGTTCTTTACAGGTGGAAAACCTTATTCCTCTCATTTaGTTACAGAGTTTGCCCAAAATAGCACACCTAGAG +
Preference number: 6 (lower is better)
Translates to: SSLQVENLIPLI*LQSLPKIAHLE
Trigger: CTCTAGGTGTGCTATTTTGGGCAAACTCTGTAAGCAAATGAGAGGAATAAGGTTTTCCACCTGTAAAGAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617965.2
CDS CAA 72 bp CTGTTTCCATCACGTTTACTAACAAGATCGATTATTTaGTCAGTGATTTCCTTGATCGGGTTCCCATCATCC +
Preference number: 6 (lower is better)
Translates to: LFPSRLLTRSII*SVISLIGFPSS
Trigger: GGATGATGGGAACCCGATCAAGGAAATCACTGACAAAATAATCGATCTTGTTAGTAAACGTGATGGAAACAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254958.10
ENST00000423891.6
ENST00000617357.1
CDS CAA 72 bp TTACTAACAAGATCGATTATTTTGTCAGTGATTTCCTaGATCGGGTTCCCATCATCCCGTATATCTTCAGCA +
Preference number: 6 (lower is better)
Translates to: LLTRSIILSVIS*IGFPSSRISSA
Trigger: TGCTGAAGATATACGGGATGATGGGAACCCGATCAAGGAAATCACTGACAAAATAATCGATCTTGTTAGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254958.10
ENST00000423891.6
ENST00000617357.1
CDS CCA 72 bp GTAGCTAAGAAGTCAGGAAAAATAGTTCTTTACAGGTaGAAAACCTTATTCCTCTCATTTGCTTACAGAGTT +
Preference number: 6 (lower is better)
Translates to: VAKKSGKIVLYR*KTLFLSFAYRV
Trigger: AACTCTGTAAGCAAATGAGAGGAATAAGGTTTTCCACCTGTAAAGAACTATTTTTCCTGACTTCTTAGCTAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000617965.2