Pregenerated sensors for JADRR (Homo sapiens)
Ensembl gene IDs: ENSG00000280711Ensembl transcript IDs: ENST00000626286.1
Found 16 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CTGGTTCTCCCTTTAGGAGATTGCTATGAAAAGGCAGAGAACCATTaGGGCCTGTTCAATAGGGCACACCTGGCTCTCTCCGTCTCCCTC | + |
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Preference number: 5 (lower is better) Translates to: LVLPLGDCYEKAENH*GLFNRAHLALSVSL Trigger: GAGGGAGACGGAGAGAGCCAGGTGTGCCCTATTGAACAGGCCCCAATGGTTCTCTGCCTTTTCATAGCAATCTCCTAAAGGGAGAACCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000626286.1 |
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| CDS CCA 90 bp | TGGGGAACTTCAATGCCCAGCCTGGGATATAAGTGGGGCCGAAGGTaGAAGAGTGAGAGTACCAGGTCTCTATACATGTCCAACTTGACC | + |
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Preference number: 5 (lower is better) Translates to: WGTSMPSLGYKWGRR*KSESTRSLYMSNLT Trigger: GGTCAAGTTGGACATGTATAGAGACCTGGTACTCTCACTCTTCCACCTTCGGCCCCACTTATATCCCAGGCTGGGCATTGAAGTTCCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000626286.1 |
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| CDS GCA 90 bp | TTATCTCACGCTCTCTTCAGGTTTGATCTCACCAGACACTCAGGCTaGACTTACCCACTTGAACAAGAGCTCTTCCAGTGTTCTGCAGTA | + |
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Preference number: 5 (lower is better) Translates to: LSHALFRFDLTRHSG*TYPLEQELFQCSAV Trigger: TACTGCAGAACACTGGAAGAGCTCTTGTTCAAGTGGGTAAGTGCAGCCTGAGTGTCTGGTGAGATCAAACCTGAAGAGAGCGTGAGATAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000626286.1 |
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| CDS TCA 90 bp | TGCTTTCTGACAGTGGATTGCCCTCTTAGGGCTGCCATTTTGTCCTaGGATTTGATGACTCTGGTTCTCCCTTTAGGAGATTGCTATGAA | + |
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Preference number: 5 (lower is better) Translates to: CFLTVDCPLRAAILS*DLMTLVLPLGDCYE Trigger: TTCATAGCAATCTCCTAAAGGGAGAACCAGAGTCATCAAATCTCAGGACAAAATGGCAGCCCTAAGAGGGCAATCCACTGTCAGAAAGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000626286.1 |
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| CDS GCA 90 bp | GTGAATGGAAATAATCTTCTTCTCTTCAGAATAATAGCTTATGCATaGTTTCTGACAGTGGATTGCCCTCTTAGGGCTGCCATTTTGTCC | + |
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Preference number: 5 (lower is better) Translates to: VNGNNLLLFRIIAYA*FLTVDCPLRAAILS Trigger: GGACAAAATGGCAGCCCTAAGAGGGCAATCCACTGTCAGAAAGCATGCATAAGCTATTATTCTGAAGAGAAGAAGATTATTTCCATTCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000626286.1 |
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| CDS TCA 90 bp | CGAATGCTCAGGGGAAGCTTTAAATTTCTTTCTACTTACAGAAGTTaGATTGCAAGAGCTATCTCTTTACCATTAATCACCAGGTCTAGT | + |
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Preference number: 5 (lower is better) Translates to: RMLRGSFKFLSTYRS*IARAISLPLITRSS Trigger: ACTAGACCTGGTGATTAATGGTAAAGAGATAGCTCTTGCAATTCAACTTCTGTAAGTAGAAAGAAATTTAAAGCTTCCCCTGAGCATTCG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000626286.1 |
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| CDS TCA 90 bp | TGGACAGATCTTATGGGTGTTTTAAAAATCTCTCTCTGGCTGCCATaGAATAGACTATGGAAGCAAGAGTTAGTTCTGTTTAAGAGGTTA | + |
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Preference number: 5 (lower is better) Translates to: WTDLMGVLKISLWLP*NRLWKQELVLFKRL Trigger: TAACCTCTTAAACAGAACTAACTCTTGCTTCCATAGTCTATTTCATGGCAGCCAGAGAGAGATTTTTAAAACACCCATAAGATCTGTCCA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000626286.1 |
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| CDS CCA 72 bp | CAGAGAACCATTGGGGCCTGTTCAATAGGGCACACCTaGCTCTCTCCGTCTCCCTCATCAAGGCCTGTGGGG | + |
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Preference number: 6 (lower is better) Translates to: QRTIGACSIGHT*LSPSPSSRPVG Trigger: CCCCACAGGCCTTGATGAGGGAGACGGAGAGAGCCAGGTGTGCCCTATTGAACAGGCCCCAATGGTTCTCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000626286.1 |
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| CDS CCA 72 bp | GTCCAACTGACTGATGGGGAACTTCAATGCCCAGCCTaGGATATAAGTGGGGCCGAAGGTGGAAGAGTGAGA | + |
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Preference number: 6 (lower is better) Translates to: VQLTDGELQCPA*DISGAEGGRVR Trigger: TCTCACTCTTCCACCTTCGGCCCCACTTATATCCCAGGCTGGGCATTGAAGTTCCCCATCAGTCAGTTGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000626286.1 |
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| CDS CCA 72 bp | TCAATGCCCAGCCTGGGATATAAGTGGGGCCGAAGGTaGAAGAGTGAGAGTACCAGGTCTCTATACATGTCC | + |
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Preference number: 6 (lower is better) Translates to: SMPSLGYKWGRR*KSESTRSLYMS Trigger: GGACATGTATAGAGACCTGGTACTCTCACTCTTCCACCTTCGGCCCCACTTATATCCCAGGCTGGGCATTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000626286.1 |
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| CDS TCA 72 bp | CTCAACTCTCTCCTTATCTCACGCTCTCTTCAGGTTTaGTCTCACCAGACACTCAGGCTGCACTTACCCACT | + |
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Preference number: 6 (lower is better) Translates to: LNSLLISRSLQV*SHQTLRLHLPT Trigger: AGTGGGTAAGTGCAGCCTGAGTGTCTGGTGAGATCAAACCTGAAGAGAGCGTGAGATAAGGAGAGAGTTGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000626286.1 |
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| CDS GCA 72 bp | GCTCTCTTCAGGTTTGATCTCACCAGACACTCAGGCTaGACTTACCCACTTGAACAAGAGCTCTTCCAGTGT | + |
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Preference number: 6 (lower is better) Translates to: ALFRFDLTRHSG*TYPLEQELFQC Trigger: ACACTGGAAGAGCTCTTGTTCAAGTGGGTAAGTGCAGCCTGAGTGTCTGGTGAGATCAAACCTGAAGAGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000626286.1 |
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| CDS TCA 72 bp | CACTTGAACAAGAGCTCTTCCAGTGTTCTGCAGTATTaGGGGAGTTCTGCGTTTAAAGGGGCCTGTCCTGTA | + |
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Preference number: 6 (lower is better) Translates to: HLNKSSSSVLQY*GSSAFKGACPV Trigger: TACAGGACAGGCCCCTTTAAACGCAGAACTCCCTCAATACTGCAGAACACTGGAAGAGCTCTTGTTCAAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000626286.1 |
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| CDS TCA 72 bp | ACAGTGGATTGCCCTCTTAGGGCTGCCATTTTGTCCTaGGATTTGATGACTCTGGTTCTCCCTTTAGGAGAT | + |
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Preference number: 6 (lower is better) Translates to: TVDCPLRAAILS*DLMTLVLPLGD Trigger: ATCTCCTAAAGGGAGAACCAGAGTCATCAAATCTCAGGACAAAATGGCAGCCCTAAGAGGGCAATCCACTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000626286.1 |
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| CDS CAA 90 bp | GGCATGATGAGAACTGGCATCAGCCTACTGATGCTGAGATTTGTTTaGAAGCATTCGAAGAGGAAGCGAATGCTCAGGGGAAGCTTTAAA | + |
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Preference number: 6 (lower is better) Translates to: GMMRTGISLLMLRFV*KHSKRKRMLRGSFK Trigger: TTTAAAGCTTCCCCTGAGCATTCGCTTCCTCTTCGAATGCTTCAAAACAAATCTCAGCATCAGTAGGCTGATGCCAGTTCTCATCATGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000626286.1 |
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| CDS TCA 72 bp | CTTATGGGTGTTTTAAAAATCTCTCTCTGGCTGCCATaGAATAGACTATGGAAGCAAGAGTTAGTTCTGTTT | + |
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Preference number: 6 (lower is better) Translates to: LMGVLKISLWLP*NRLWKQELVLF Trigger: AAACAGAACTAACTCTTGCTTCCATAGTCTATTTCATGGCAGCCAGAGAGAGATTTTTAAAACACCCATAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000626286.1 |
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