RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for JADE3 (Homo sapiens)

Ensembl gene IDs: ENSG00000102221

Ensembl transcript IDs: ENST00000424392.5, ENST00000455411.1, ENST00000611250.4, ENST00000614628.5

Found 350 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCTGGTACAAATACCCCAGAAATGGTCTCACTTTGGGAAAGGCTCTaGAATCCTTCACAAATGCCTAAACAGAGAATCAGAGCATTTTCC +
Preference number: 1 (lower is better)
Translates to: PGTNTPEMVSLWERL*NPSQMPKQRIRAFS
Trigger: GGAAAATGCTCTGATTCTCTGTTTAGGCATTTGTGAAGGATTCCAGAGCCTTTCCCAAAGTGAGACCATTTCTGGGGTATTTGTACCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
3UTR TCA 90 bp GTGAGTTTGACAGTATCTAAGATGGTGGTCTCCTGGTCTCTCCCCTaGAAAGGGTTTATAGATACCAGTGGAATTAGAAACTTCCTACAG +
Preference number: 1 (lower is better)
Translates to: VSLTVSKMVVSWSLP*KGFIDTSGIRNFLQ
Trigger: CTGTAGGAAGTTTCTAATTCCACTGGTATCTATAAACCCTTTTCAGGGGAGAGACCAGGAGACCACCATCTTAGATACTGTCAAACTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
3UTR-3UTR CCA 90 bp TGGGCCCAGCTGTTCCCAATAGCCTCTGACAAACCAACCTCTGGACAACCTGCAGTTTTCCCCAATATATaGGGCAAAGGCAAAGGTTGG +
Preference number: 2 (lower is better)
Translates to: WAQLFPIASDKPTSGQPAVFPNI*GKGKGW
Trigger: CCAACCTTTGCCTTTGCCCCATATATTGGGGAAAAC...TGCAGGTTGTCCAGAGGTTGGTTTGTCAGAGGCTATTGGGAACAGCTGGGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
3UTR-3UTR TCA 90 bp CCAAACAAAATACAGGACACCTACCACACATGCTATGGCATGTTTACACATGTAGGCCCCTGCCTTGACTaGCTGGCACCTACTACAACT +
Preference number: 2 (lower is better)
Translates to: PNKIQDTYHTCYGMFTHVGPCLD*LAPTTT
Trigger: AGTTGTAGTAGGTGCCAGTCAGTCAAGGCAGGGGCC...TACATGTGTAAACATGCCATAGCATGTGTGGTAGGTGTCCTGTATTTTGTTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
3UTR-3UTR CCA 90 bp GGTACAAATACCCCAGAAATGGTCTCACTTTGGGAAAGGCTCTGGAATCCTTCACAGTATCTAAGATGGTaGTCTCCTGGTCTCTCCCCT +
Preference number: 2 (lower is better)
Translates to: GTNTPEMVSLWERLWNPSQYLRW*SPGLSP
Trigger: AGGGGAGAGACCAGGAGACCACCATCTTAGATACTG...TGAAGGATTCCAGAGCCTTTCCCAAAGTGAGACCATTTCTGGGGTATTTGTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
3UTR-3UTR TCA 90 bp GGTACAAATACCCCAGAAATGGTCTCACTTTGGGAAAGGCTCTGGAATCCTTCATCCTGGTCTCTCCCCTaGAAAGGGTTTATAGATACC +
Preference number: 2 (lower is better)
Translates to: GTNTPEMVSLWERLWNPSSWSLP*KGFIDT
Trigger: GGTATCTATAAACCCTTTTCAGGGGAGAGACCAGGA...TGAAGGATTCCAGAGCCTTTCCCAAAGTGAGACCATTTCTGGGGTATTTGTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
3UTR-3UTR TCA 90 bp CCAAACAAAATACAGGACACCTACCACACATGCTATGGCATGTTTACACATGTACTGAGTTTTCCATATTaGCGGAGAGAGGGCCCCTGC +
Preference number: 2 (lower is better)
Translates to: PNKIQDTYHTCYGMFTHVLSFPY*RREGPC
Trigger: GCAGGGGCCCTCTCTCCGTCAATATGGAAAACTCAG...TACATGTGTAAACATGCCATAGCATGTGTGGTAGGTGTCCTGTATTTTGTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
3UTR-3UTR CCA 90 bp GGTACAAATACCCCAGAAATGGTCTCACTTTGGGAAAGGCTCTGGAATCCTTCAGTTTTCCCCAATATATaGGGCAAAGGCAAAGGTTGG +
Preference number: 2 (lower is better)
Translates to: GTNTPEMVSLWERLWNPSVFPNI*GKGKGW
Trigger: CCAACCTTTGCCTTTGCCCCATATATTGGGGAAAAC...TGAAGGATTCCAGAGCCTTTCCCAAAGTGAGACCATTTCTGGGGTATTTGTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
3UTR-3UTR TCA 90 bp GAAAGAAACTCAACCTTGTGCAGAACAAAGGAAGACAGTAGTGAGTTTGACAGTCCCCAAAATATTTACTaGGCAAATACCCTGGGCCCA +
Preference number: 2 (lower is better)
Translates to: ERNSTLCRTKEDSSEFDSPQNIY*ANTLGP
Trigger: TGGGCCCAGGGTATTTGCTCAGTAAATATTTTGGGG...ACTGTCAAACTCACTACTGTCTTCCTTTGTTCTGCACAAGGTTGAGTTTCTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
3UTR-3UTR CCA 90 bp TTTTTCCCAAACAAAATACAGGACACCTACCACACATGCTATGGCATGTTTACACAGTATCTAAGATGGTaGTCTCCTGGTCTCTCCCCT +
Preference number: 2 (lower is better)
Translates to: FFPNKIQDTYHTCYGMFTQYLRW*SPGLSP
Trigger: AGGGGAGAGACCAGGAGACCACCATCTTAGATACTG...TGTAAACATGCCATAGCATGTGTGGTAGGTGTCCTGTATTTTGTTTGGGAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
3UTR-3UTR TCA 90 bp TTTTTCCCAAACAAAATACAGGACACCTACCACACATGCTATGGCATGTTTACATCCTGGTCTCTCCCCTaGAAAGGGTTTATAGATACC +
Preference number: 2 (lower is better)
Translates to: FFPNKIQDTYHTCYGMFTSWSLP*KGFIDT
Trigger: GGTATCTATAAACCCTTTTCAGGGGAGAGACCAGGA...TGTAAACATGCCATAGCATGTGTGGTAGGTGTCCTGTATTTTGTTTGGGAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
3UTR-3UTR TCA 90 bp CCAAACAAAATACAGGACACCTACCACACATGCTATGGCATGTTTACACATGTAACAACACAAAAACCCTaGCCTGGTACAAATACCCCA +
Preference number: 2 (lower is better)
Translates to: PNKIQDTYHTCYGMFTHVTTQKP*PGTNTP
Trigger: TGGGGTATTTGTACCAGGTCAGGGTTTTTGTGTTGT...TACATGTGTAAACATGCCATAGCATGTGTGGTAGGTGTCCTGTATTTTGTTTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
3UTR-3UTR CCA 90 bp CCAAACAAAATACAGGACACCTACCACACATGCTATGGCATGTTTACACATGTACTTTGGGAAAGGCTCTaGAATCCTTCACAAATGCCT +
Preference number: 2 (lower is better)
Translates to: PNKIQDTYHTCYGMFTHVLWERL*NPSQMP
Trigger: AGGCATTTGTGAAGGATTCCAGAGCCTTTCCCAAAG...TACATGTGTAAACATGCCATAGCATGTGTGGTAGGTGTCCTGTATTTTGTTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
3UTR-3UTR CCA 90 bp CCAAACAAAATACAGGACACCTACCACACATGCTATGGCATGTTTACACATGTAGAAATGGTCTCACTTTaGGAAAGGCTCTGGAATCCT +
Preference number: 2 (lower is better)
Translates to: PNKIQDTYHTCYGMFTHVEMVSL*ERLWNP
Trigger: AGGATTCCAGAGCCTTTCCCAAAGTGAGACCATTTC...TACATGTGTAAACATGCCATAGCATGTGTGGTAGGTGTCCTGTATTTTGTTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
3UTR-3UTR CCA 90 bp CCAAACAAAATACAGGACACCTACCACACATGCTATGGCATGTTTACACATGTATTACAAGAACACAACTaGGGGAGAGGAAAACTGCTG +
Preference number: 2 (lower is better)
Translates to: PNKIQDTYHTCYGMFTHVLQEHN*GRGKLL
Trigger: CAGCAGTTTTCCTCTCCCCCAGTTGTGTTCTTGTAA...TACATGTGTAAACATGCCATAGCATGTGTGGTAGGTGTCCTGTATTTTGTTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
3UTR-3UTR CCA 90 bp TTTTTCCCAAACAAAATACAGGACACCTACCACACATGCTATGGCATGTTTACATTTAGGAACAGGCACTaGACACTGATAAGCATGAGG +
Preference number: 2 (lower is better)
Translates to: FFPNKIQDTYHTCYGMFTFRNRH*TLISMR
Trigger: CCTCATGCTTATCAGTGTCCAGTGCCTGTTCCTAAA...TGTAAACATGCCATAGCATGTGTGGTAGGTGTCCTGTATTTTGTTTGGGAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
3UTR-3UTR CCA 90 bp CCAAACAAAATACAGGACACCTACCACACATGCTATGGCATGTTTACACATGTATCCAGCCTTTTTGTTTaGGAAACTGCCTCAGATTCA +
Preference number: 2 (lower is better)
Translates to: PNKIQDTYHTCYGMFTHVSSLFV*ETASDS
Trigger: TGAATCTGAGGCAGTTTCCCAAACAAAAAGGCTGGA...TACATGTGTAAACATGCCATAGCATGTGTGGTAGGTGTCCTGTATTTTGTTTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
3UTR-3UTR CCA 90 bp TTTTTCCCAAACAAAATACAGGACACCTACCACACATGCTATGGCATGTTTACATTACAAGAACACAACTaGGGGAGAGGAAAACTGCTG +
Preference number: 2 (lower is better)
Translates to: FFPNKIQDTYHTCYGMFTLQEHN*GRGKLL
Trigger: CAGCAGTTTTCCTCTCCCCCAGTTGTGTTCTTGTAA...TGTAAACATGCCATAGCATGTGTGGTAGGTGTCCTGTATTTTGTTTGGGAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
3UTR TCA 72 bp GAGTTTTCCATATTGACGGAGAGAGGGCCCCTGCCTTaGCTGACTGGCACCTACTACAACTGGGCTGTTTCA +
Preference number: 3 (lower is better)
Translates to: EFSILTERGPLP*LTGTYYNWAVS
Trigger: TGAAACAGCCCAGTTGTAGTAGGTGCCAGTCAGTCAAGGCAGGGGCCCTCTCTCCGTCAATATGGAAAACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
3UTR TCA 72 bp GCAAATACCCTGGGCCCAGCTGTTCCCAATAGCCTCTaGCAAACCAACCTCTGGACAACCTGCAATTACTGT +
Preference number: 3 (lower is better)
Translates to: ANTLGPAVPNSL*QTNLWTTCNYC
Trigger: ACAGTAATTGCAGGTTGTCCAGAGGTTGGTTTGTCAGAGGCTATTGGGAACAGCTGGGCCCAGGGTATTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
3UTR CCA 72 bp AGTGTGTCCCCAACAAGCAAGTTTAGGAACAGGCACTaGACACTGATAAGCATGAGGAGTATTGACTCAGTA +
Preference number: 3 (lower is better)
Translates to: SVSPTSKFRNRH*TLISMRSIDSV
Trigger: TACTGAGTCAATACTCCTCATGCTTATCAGTGTCCAGTGCCTGTTCCTAAACTTGCTTGTTGGGGACACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
3UTR TCA 72 bp ACAGTATCTAAGATGGTGGTCTCCTGGTCTCTCCCCTaGAAAGGGTTTATAGATACCAGTGGAATTAGAAAC +
Preference number: 3 (lower is better)
Translates to: TVSKMVVSWSLP*KGFIDTSGIRN
Trigger: GTTTCTAATTCCACTGGTATCTATAAACCCTTTTCAGGGGAGAGACCAGGAGACCACCATCTTAGATACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
3UTR TCA 72 bp AGGCTGATAGTTTGGGAACAGGGTATAAGCAACTTCTaGAAAATGGCTCCAGCCTTTTTGTTTGGGAAACTG +
Preference number: 3 (lower is better)
Translates to: RLIVWEQGISNF*KMAPAFLFGKL
Trigger: CAGTTTCCCAAACAAAAAGGCTGGAGCCATTTTTCAGAAGTTGCTTATACCCTGTTCCCAAACTATCAGCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
3UTR-3UTR CAA 90 bp TTTTTCCCAAACAAAATACAGGACACCTACCACACATGCTATGGCATGTTTACAAGAAATGGTCTCACTTaGGGAAAGGCTCTGGAATCC +
Preference number: 3 (lower is better)
Translates to: FFPNKIQDTYHTCYGMFTRNGLT*GKALES
Trigger: GGATTCCAGAGCCTTTCCCAAAGTGAGACCATTTCT...TGTAAACATGCCATAGCATGTGTGGTAGGTGTCCTGTATTTTGTTTGGGAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
3UTR-3UTR CAA 90 bp CCAAACAAAATACAGGACACCTACCACACATGCTATGGCATGTTTACACATGTAAAGACAGTAGTGAGTTaGACAGTATCTAAGATGGTG +
Preference number: 3 (lower is better)
Translates to: PNKIQDTYHTCYGMFTHVKTVVS*TVSKMV
Trigger: CACCATCTTAGATACTGTCAAACTCACTACTGTCTT...TACATGTGTAAACATGCCATAGCATGTGTGGTAGGTGTCCTGTATTTTGTTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
3UTR-3UTR CAA 90 bp TTTTTCCCAAACAAAATACAGGACACCTACCACACATGCTATGGCATGTTTACAGAAAGAAACTCAACCTaGTGCAGAACAAAGGAAGAC +
Preference number: 3 (lower is better)
Translates to: FFPNKIQDTYHTCYGMFTERNST*CRTKED
Trigger: GTCTTCCTTTGTTCTGCACAAGGTTGAGTTTCTTTC...TGTAAACATGCCATAGCATGTGTGGTAGGTGTCCTGTATTTTGTTTGGGAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
3UTR-3UTR CAA 90 bp TTTTTCCCAAACAAAATACAGGACACCTACCACACATGCTATGGCATGTTTACAATCAAGGCTGATAGTTaGGGAACAGGGTATAAGCAA +
Preference number: 3 (lower is better)
Translates to: FFPNKIQDTYHTCYGMFTIKADS*GTGYKQ
Trigger: TTGCTTATACCCTGTTCCCAAACTATCAGCCTTGAT...TGTAAACATGCCATAGCATGTGTGGTAGGTGTCCTGTATTTTGTTTGGGAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
3UTR GCA 72 bp TTTTTCCCAAACAAAATACAGGACACCTACCACACATaGTATGGCATGTTTACACATGTACATAGGCACAAA +
Preference number: 3 (lower is better)
Translates to: FFPNKIQDTYHT*YGMFTHVHRHK
Trigger: TTTGTGCCTATGTACATGTGTAAACATGCCATAGCATGTGTGGTAGGTGTCCTGTATTTTGTTTGGGAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR GCA 90 bp TGGGCCCAGCTGTTCCCAATAGCCTCTGACAAACCAACCTCTGGACAACCTGCACGGCTCCCAGCCGTCTaGCCGCCGCGCGTTCTTCTG +
Preference number: 4 (lower is better)
Translates to: WAQLFPIASDKPTSGQPARLPAV*PPRVLL
Trigger: CAGAAGAACGCGCGGCGGGCAGACGGCTGGGAGCCG...TGCAGGTTGTCCAGAGGTTGGTTTGTCAGAGGCTATTGGGAACAGCTGGGCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611250.4
CDS-3UTR GCA 90 bp TGGGCCCAGCTGTTCCCAATAGCCTCTGACAAACCAACCTCTGGACAACCTGCACGCGGCCCGGCAATGTaGCGGGTGAGTCCGGTCGGA +
Preference number: 4 (lower is better)
Translates to: WAQLFPIASDKPTSGQPARGPAM*RVSPVG
Trigger: TCCGACCGGACTCACCCGGCACATTGCCGGGCCGCG...TGCAGGTTGTCCAGAGGTTGGTTTGTCAGAGGCTATTGGGAACAGCTGGGCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614628.5
CDS-3UTR GCA 90 bp TGGGCCCAGCTGTTCCCAATAGCCTCTGACAAACCAACCTCTGGACAACCTGCAGGGCATACCCAGCTCTaGGGCCACATCTTCCACTCG +
Preference number: 4 (lower is better)
Translates to: WAQLFPIASDKPTSGQPAGHTQL*GHIFHS
Trigger: CGAGTGGAAGATGTGGCCGCAGAGCTGGGTATGCCC...TGCAGGTTGTCCAGAGGTTGGTTTGTCAGAGGCTATTGGGAACAGCTGGGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR TCA 90 bp TGGGCCCAGCTGTTCCCAATAGCCTCTGACAAACCAACCTCTGGACAACCTGCAGGCCCCTGCCTTGACTaGCTGGCACCTACTACAACT +
Preference number: 4 (lower is better)
Translates to: WAQLFPIASDKPTSGQPAGPCLD*LAPTTT
Trigger: AGTTGTAGTAGGTGCCAGTCAGTCAAGGCAGGGGCC...TGCAGGTTGTCCAGAGGTTGGTTTGTCAGAGGCTATTGGGAACAGCTGGGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR TCA 90 bp GAGCAAATACCCTGGGCCCAGCTGTTCCCAATAGCCTCTGACAAACCAACCTCTAGAGGGCCCCTGCCTTaGCTGACTGGCACCTACTAC +
Preference number: 4 (lower is better)
Translates to: EQIPWAQLFPIASDKPTSRGPLP*LTGTYY
Trigger: GTAGTAGGTGCCAGTCAGTCAAGGCAGGGGCCCTCT...AGAGGTTGGTTTGTCAGAGGCTATTGGGAACAGCTGGGCCCAGGGTATTTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR GCA 90 bp TGGGCCCAGCTGTTCCCAATAGCCTCTGACAAACCAACCTCTGGACAACCTGCACTCCCGAAGCTTCTGTaGCCGCAGGCTGGTTTTCTC +
Preference number: 4 (lower is better)
Translates to: WAQLFPIASDKPTSGQPALPKLL*PQAGFL
Trigger: GAGAAAACCAGCCTGCGGGCACAGAAGCTTCGGGAG...TGCAGGTTGTCCAGAGGTTGGTTTGTCAGAGGCTATTGGGAACAGCTGGGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CCA 90 bp TGGGCCCAGCTGTTCCCAATAGCCTCTGACAAACCAACCTCTGGACAACCTGCATATGGCGTTTCATCCTaGAGCATCCGGAGCGGCTCC +
Preference number: 4 (lower is better)
Translates to: WAQLFPIASDKPTSGQPAYGVSS*SIRSGS
Trigger: GGAGCCGCTCCGGATGCTCCAGGATGAAACGCCATA...TGCAGGTTGTCCAGAGGTTGGTTTGTCAGAGGCTATTGGGAACAGCTGGGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611250.4
CDS-3UTR CCA 90 bp TGGGCCCAGCTGTTCCCAATAGCCTCTGACAAACCAACCTCTGGACAACCTGCAGAACGGTGTCTGGACTaGCTGGTACCTGGACTCCCT +
Preference number: 4 (lower is better)
Translates to: WAQLFPIASDKPTSGQPAERCLD*LVPGLP
Trigger: AGGGAGTCCAGGTACCAGCCAGTCCAGACACCGTTC...TGCAGGTTGTCCAGAGGTTGGTTTGTCAGAGGCTATTGGGAACAGCTGGGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CCA 90 bp TGGGCCCAGCTGTTCCCAATAGCCTCTGACAAACCAACCTCTGGACAACCTGCATGTAGCCAGGCTCTGTaGTGTCTGGGCTGGAGCAGT +
Preference number: 4 (lower is better)
Translates to: WAQLFPIASDKPTSGQPACSQAL*CLGWSS
Trigger: ACTGCTCCAGCCCAGACACCACAGAGCCTGGCTACA...TGCAGGTTGTCCAGAGGTTGGTTTGTCAGAGGCTATTGGGAACAGCTGGGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CCA 90 bp TGGGCCCAGCTGTTCCCAATAGCCTCTGACAAACCAACCTCTGGACAACCTGCACTAAGGCCCACCGACTaGGTGGGATGTGGGAGATCT +
Preference number: 4 (lower is better)
Translates to: WAQLFPIASDKPTSGQPALRPTD*VGCGRS
Trigger: AGATCTCCCACATCCCACCCAGTCGGTGGGCCTTAG...TGCAGGTTGTCCAGAGGTTGGTTTGTCAGAGGCTATTGGGAACAGCTGGGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CCA 90 bp GGTACAAATACCCCAGAAATGGTCTCACTTTGGGAAAGGCTCTGGAATCCTTCACATCCTTCGCGCAGCTaGCTCGCGGCTCCTGCCCGG +
Preference number: 4 (lower is better)
Translates to: GTNTPEMVSLWERLWNPSHPSRS*LAAPAR
Trigger: CCGGGCAGGAGCCGCGAGCCAGCTGCGCGAAGGATG...TGAAGGATTCCAGAGCCTTTCCCAAAGTGAGACCATTTCTGGGGTATTTGTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614628.5
CDS-3UTR GCA 90 bp GAGCAAATACCCTGGGCCCAGCTGTTCCCAATAGCCTCTGACAAACCAACCTCTCTCCCGAAGCTTCTGTaGCCGCAGGCTGGTTTTCTC +
Preference number: 4 (lower is better)
Translates to: EQIPWAQLFPIASDKPTSLPKLL*PQAGFL
Trigger: GAGAAAACCAGCCTGCGGGCACAGAAGCTTCGGGAG...AGAGGTTGGTTTGTCAGAGGCTATTGGGAACAGCTGGGCCCAGGGTATTTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR GCA 90 bp TGGGCCCAGCTGTTCCCAATAGCCTCTGACAAACCAACCTCTGGACAACCTGCAATATGGAGCTCTCCCTaGAGACCGCCTGAGAACCTG +
Preference number: 4 (lower is better)
Translates to: WAQLFPIASDKPTSGQPAIWSSP*RPPENL
Trigger: CAGGTTCTCAGGCGGTCTGCAGGGAGAGCTCCATAT...TGCAGGTTGTCCAGAGGTTGGTTTGTCAGAGGCTATTGGGAACAGCTGGGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CCA 90 bp GAGCAAATACCCTGGGCCCAGCTGTTCCCAATAGCCTCTGACAAACCAACCTCTCCTGAGAGAAGGCTGTaGAACGGTGTCTGGACTGGC +
Preference number: 4 (lower is better)
Translates to: EQIPWAQLFPIASDKPTSPERRL*NGVWTG
Trigger: GCCAGTCCAGACACCGTTCCACAGCCTTCTCTCAGG...AGAGGTTGGTTTGTCAGAGGCTATTGGGAACAGCTGGGCCCAGGGTATTTGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR TCA 90 bp GAGCAAATACCCTGGGCCCAGCTGTTCCCAATAGCCTCTGACAAACCAACCTCTCAGAGGCTTTCCCAGTaGCTGCCCATGATAGCACTC +
Preference number: 4 (lower is better)
Translates to: EQIPWAQLFPIASDKPTSQRLSQ*LPMIAL
Trigger: GAGTGCTATCATGGGCAGTCACTGGGAAAGCCTCTG...AGAGGTTGGTTTGTCAGAGGCTATTGGGAACAGCTGGGCCCAGGGTATTTGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR GCA 90 bp TGGGCCCAGCTGTTCCCAATAGCCTCTGACAAACCAACCTCTGGACAACCTGCATTCATCTCTAGGCCGTaGTCAAAGGCACAGGTGACG +
Preference number: 4 (lower is better)
Translates to: WAQLFPIASDKPTSGQPAFISRP*SKAQVT
Trigger: CGTCACCTGTGCCTTTGAGCACGGCCTAGAGATGAA...TGCAGGTTGTCCAGAGGTTGGTTTGTCAGAGGCTATTGGGAACAGCTGGGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CCA 90 bp TGGGCCCAGCTGTTCCCAATAGCCTCTGACAAACCAACCTCTGGACAACCTGCACTGCTGACAGGCCTATaGCGTTTCATCCTGGAGCAT +
Preference number: 4 (lower is better)
Translates to: WAQLFPIASDKPTSGQPALLTGL*RFILEH
Trigger: ATGCTCCAGGATGAAACGCCATAGGCCTGTCAGCAG...TGCAGGTTGTCCAGAGGTTGGTTTGTCAGAGGCTATTGGGAACAGCTGGGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CCA 90 bp TGGGCCCAGCTGTTCCCAATAGCCTCTGACAAACCAACCTCTGGACAACCTGCACCCTTCTTCACTGTCTaGAGACCGGCACACATCACA +
Preference number: 4 (lower is better)
Translates to: WAQLFPIASDKPTSGQPAPFFTV*RPAHIT
Trigger: TGTGATGTGTGCCGGTCTCCAGACAGTGAAGAAGGG...TGCAGGTTGTCCAGAGGTTGGTTTGTCAGAGGCTATTGGGAACAGCTGGGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CCA 90 bp TGGGCCCAGCTGTTCCCAATAGCCTCTGACAAACCAACCTCTGGACAACCTGCATCTGTGCCCGCAGGCTaGTTTTCTCACTTTTGGCCT +
Preference number: 4 (lower is better)
Translates to: WAQLFPIASDKPTSGQPASVPAG*FSHFWP
Trigger: AGGCCAAAAGTGAGAAAACCAGCCTGCGGGCACAGA...TGCAGGTTGTCCAGAGGTTGGTTTGTCAGAGGCTATTGGGAACAGCTGGGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CCA 90 bp GAGCAAATACCCTGGGCCCAGCTGTTCCCAATAGCCTCTGACAAACCAACCTCTCCTGCCTTGACTGACTaGCACCTACTACAACTGGGC +
Preference number: 4 (lower is better)
Translates to: EQIPWAQLFPIASDKPTSPALTD*HLLQLG
Trigger: GCCCAGTTGTAGTAGGTGCCAGTCAGTCAAGGCAGG...AGAGGTTGGTTTGTCAGAGGCTATTGGGAACAGCTGGGCCCAGGGTATTTGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR TCA 90 bp TGGGCCCAGCTGTTCCCAATAGCCTCTGACAAACCAACCTCTGGACAACCTGCAGTTCCCAATAGCCTCTaGCAAACCAACCTCTGGACA +
Preference number: 4 (lower is better)
Translates to: WAQLFPIASDKPTSGQPAVPNSL*QTNLWT
Trigger: TGTCCAGAGGTTGGTTTGTCAGAGGCTATTGGGAAC...TGCAGGTTGTCCAGAGGTTGGTTTGTCAGAGGCTATTGGGAACAGCTGGGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR GCA 90 bp GAGCAAATACCCTGGGCCCAGCTGTTCCCAATAGCCTCTGACAAACCAACCTCTCACATTGCGGATAAATaGCCAGGACACAGGAGCGAC +
Preference number: 4 (lower is better)
Translates to: EQIPWAQLFPIASDKPTSHIADK*PGHRSD
Trigger: GTCGCTCCTGTGTCCTGGGCATTTATCCGCAATGTG...AGAGGTTGGTTTGTCAGAGGCTATTGGGAACAGCTGGGCCCAGGGTATTTGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR GCA 90 bp TGGGCCCAGCTGTTCCCAATAGCCTCTGACAAACCAACCTCTGGACAACCTGCATCAACTTGCACAAGTTaGAGACTAAGGCCCACCGAC +
Preference number: 4 (lower is better)
Translates to: WAQLFPIASDKPTSGQPASTCTS*RLRPTD
Trigger: GTCGGTGGGCCTTAGTCTGCAACTTGTGCAAGTTGA...TGCAGGTTGTCCAGAGGTTGGTTTGTCAGAGGCTATTGGGAACAGCTGGGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR GCA 90 bp TGGGCCCAGCTGTTCCCAATAGCCTCTGACAAACCAACCTCTGGACAACCTGCACCCCCGTCTTCAACTTaGACAAGTTGCAGACTAAGG +
Preference number: 4 (lower is better)
Translates to: WAQLFPIASDKPTSGQPAPPSST*TSCRLR
Trigger: CCTTAGTCTGCAACTTGTGCAAGTTGAAGACGGGGG...TGCAGGTTGTCCAGAGGTTGGTTTGTCAGAGGCTATTGGGAACAGCTGGGCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR GCA 90 bp TGGGCCCAGCTGTTCCCAATAGCCTCTGACAAACCAACCTCTGGACAACCTGCATGTCTACCCCAGAACTaGTCCTTGGGGCTCATATTC +
Preference number: 4 (lower is better)
Translates to: WAQLFPIASDKPTSGQPACLPQN*SLGLIF
Trigger: GAATATGAGCCCCAAGGAGCAGTTCTGGGGTAGACA...TGCAGGTTGTCCAGAGGTTGGTTTGTCAGAGGCTATTGGGAACAGCTGGGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CCA 90 bp TGGGCCCAGCTGTTCCCAATAGCCTCTGACAAACCAACCTCTGGACAACCTGCACTCGAGCTGTCTTTTTaGGTGACATTCCCAGACCAG +
Preference number: 4 (lower is better)
Translates to: WAQLFPIASDKPTSGQPALELSF*VTFPDQ
Trigger: CTGGTCTGGGAATGTCACCCAAAAAGACAGCTCGAG...TGCAGGTTGTCCAGAGGTTGGTTTGTCAGAGGCTATTGGGAACAGCTGGGCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CCA 90 bp TGGGCCCAGCTGTTCCCAATAGCCTCTGACAAACCAACCTCTGGACAACCTGCACTGAACACAGGCTCCTaGTCACAGAACATCTCACTC +
Preference number: 4 (lower is better)
Translates to: WAQLFPIASDKPTSGQPALNTGS*SQNISL
Trigger: GAGTGAGATGTTCTGTGACCAGGAGCCTGTGTTCAG...TGCAGGTTGTCCAGAGGTTGGTTTGTCAGAGGCTATTGGGAACAGCTGGGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CCA 90 bp TGGGCCCAGCTGTTCCCAATAGCCTCTGACAAACCAACCTCTGGACAACCTGCACAGTATCTAAGATGGTaGTCTCCTGGTCTCTCCCCT +
Preference number: 4 (lower is better)
Translates to: WAQLFPIASDKPTSGQPAQYLRW*SPGLSP
Trigger: AGGGGAGAGACCAGGAGACCACCATCTTAGATACTG...TGCAGGTTGTCCAGAGGTTGGTTTGTCAGAGGCTATTGGGAACAGCTGGGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR TCA 90 bp GGTACAAATACCCCAGAAATGGTCTCACTTTGGGAAAGGCTCTGGAATCCTTCAGGAGAGTGGGGCTGCTaGTCGGTTTCTGTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: GTNTPEMVSLWERLWNPSGEWGC*SVSVEL
Trigger: CAGCTCCACAGAAACCGATCAGCAGCCCCACTCTCC...TGAAGGATTCCAGAGCCTTTCCCAAAGTGAGACCATTTCTGGGGTATTTGTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR TCA 90 bp TGGGCCCAGCTGTTCCCAATAGCCTCTGACAAACCAACCTCTGGACAACCTGCATATACTGTGAACAGATaGGCTGCTGTCAGGAGAGTG +
Preference number: 4 (lower is better)
Translates to: WAQLFPIASDKPTSGQPAYTVNR*AAVRRV
Trigger: CACTCTCCTGACAGCAGCTCATCTGTTCACAGTATA...TGCAGGTTGTCCAGAGGTTGGTTTGTCAGAGGCTATTGGGAACAGCTGGGCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR TCA 90 bp TGGGCCCAGCTGTTCCCAATAGCCTCTGACAAACCAACCTCTGGACAACCTGCACCCCAAAATATTTACTaGGCAAATACCCTGGGCCCA +
Preference number: 4 (lower is better)
Translates to: WAQLFPIASDKPTSGQPAPQNIY*ANTLGP
Trigger: TGGGCCCAGGGTATTTGCTCAGTAAATATTTTGGGG...TGCAGGTTGTCCAGAGGTTGGTTTGTCAGAGGCTATTGGGAACAGCTGGGCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR GCA 90 bp GAGCAAATACCCTGGGCCCAGCTGTTCCCAATAGCCTCTGACAAACCAACCTCTCCCCCGTCTTCAACTTaGACAAGTTGCAGACTAAGG +
Preference number: 4 (lower is better)
Translates to: EQIPWAQLFPIASDKPTSPPSST*TSCRLR
Trigger: CCTTAGTCTGCAACTTGTGCAAGTTGAAGACGGGGG...AGAGGTTGGTTTGTCAGAGGCTATTGGGAACAGCTGGGCCCAGGGTATTTGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR GCA 90 bp TGGGCCCAGCTGTTCCCAATAGCCTCTGACAAACCAACCTCTGGACAACCTGCAAGGACTGGACTCCTTTaGTTCACTCCTAGAATGGCT +
Preference number: 4 (lower is better)
Translates to: WAQLFPIASDKPTSGQPARTGLL*FTPRMA
Trigger: AGCCATTCTAGGAGTGAAGCAAAGGAGTCCAGTCCT...TGCAGGTTGTCCAGAGGTTGGTTTGTCAGAGGCTATTGGGAACAGCTGGGCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CCA 90 bp GAGCAAATACCCTGGGCCCAGCTGTTCCCAATAGCCTCTGACAAACCAACCTCTACTGAGCAAATACCCTaGGCCCAGCTGTTCCCAATA +
Preference number: 4 (lower is better)
Translates to: EQIPWAQLFPIASDKPTSTEQIP*AQLFPI
Trigger: TATTGGGAACAGCTGGGCCCAGGGTATTTGCTCAGT...AGAGGTTGGTTTGTCAGAGGCTATTGGGAACAGCTGGGCCCAGGGTATTTGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR TCA 90 bp GGTACAAATACCCCAGAAATGGTCTCACTTTGGGAAAGGCTCTGGAATCCTTCATCTGGGCTGGAGCAGTaGATATACTTCCGGGGTCGG +
Preference number: 4 (lower is better)
Translates to: GTNTPEMVSLWERLWNPSSGLEQ*IYFRGR
Trigger: CCGACCCCGGAAGTATATTCACTGCTCCAGCCCAGA...TGAAGGATTCCAGAGCCTTTCCCAAAGTGAGACCATTTCTGGGGTATTTGTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR TCA 90 bp GAGCAAATACCCTGGGCCCAGCTGTTCCCAATAGCCTCTGACAAACCAACCTCTCTGCAAGGTCTTCATTaGGTTCCTGAAGCCAGAAGA +
Preference number: 4 (lower is better)
Translates to: EQIPWAQLFPIASDKPTSLQGLH*VPEARR
Trigger: TCTTCTGGCTTCAGGAACTCAATGAAGACCTTGCAG...AGAGGTTGGTTTGTCAGAGGCTATTGGGAACAGCTGGGCCCAGGGTATTTGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR TCA 90 bp TGGGCCCAGCTGTTCCCAATAGCCTCTGACAAACCAACCTCTGGACAACCTGCACTGTATTTTGTTGTGTaGCAGCTTCAGCTTCTCTCG +
Preference number: 4 (lower is better)
Translates to: WAQLFPIASDKPTSGQPALYFVV*QLQLLS
Trigger: CGAGAGAAGCTGAAGCTGTCACACAACAAAATACAG...TGCAGGTTGTCCAGAGGTTGGTTTGTCAGAGGCTATTGGGAACAGCTGGGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR TCA 90 bp TGGGCCCAGCTGTTCCCAATAGCCTCTGACAAACCAACCTCTGGACAACCTGCAAACTTGGAGTTAGGCTaGCTTTTCCCATTCCCAATG +
Preference number: 4 (lower is better)
Translates to: WAQLFPIASDKPTSGQPANLELG*LFPFPM
Trigger: CATTGGGAATGGGAAAAGTCAGCCTAACTCCAAGTT...TGCAGGTTGTCCAGAGGTTGGTTTGTCAGAGGCTATTGGGAACAGCTGGGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR TCA 90 bp TGGGCCCAGCTGTTCCCAATAGCCTCTGACAAACCAACCTCTGGACAACCTGCAACAACACAAAAACCCTaGCCTGGTACAAATACCCCA +
Preference number: 4 (lower is better)
Translates to: WAQLFPIASDKPTSGQPATTQKP*PGTNTP
Trigger: TGGGGTATTTGTACCAGGTCAGGGTTTTTGTGTTGT...TGCAGGTTGTCCAGAGGTTGGTTTGTCAGAGGCTATTGGGAACAGCTGGGCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR TCA 90 bp GGTACAAATACCCCAGAAATGGTCTCACTTTGGGAAAGGCTCTGGAATCCTTCAGGCCCCTGCCTTGACTaGCTGGCACCTACTACAACT +
Preference number: 4 (lower is better)
Translates to: GTNTPEMVSLWERLWNPSGPCLD*LAPTTT
Trigger: AGTTGTAGTAGGTGCCAGTCAGTCAAGGCAGGGGCC...TGAAGGATTCCAGAGCCTTTCCCAAAGTGAGACCATTTCTGGGGTATTTGTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR GCA 90 bp GAGCAAATACCCTGGGCCCAGCTGTTCCCAATAGCCTCTGACAAACCAACCTCTGCGGCAAACAGATGCTaGCAACTCCATGATGTTGAT +
Preference number: 4 (lower is better)
Translates to: EQIPWAQLFPIASDKPTSAANRC*QLHDVD
Trigger: ATCAACATCATGGAGTTGGCAGCATCTGTTTGCCGC...AGAGGTTGGTTTGTCAGAGGCTATTGGGAACAGCTGGGCCCAGGGTATTTGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR GCA 90 bp GAGCAAATACCCTGGGCCCAGCTGTTCCCAATAGCCTCTGACAAACCAACCTCTAGGACTGGACTCCTTTaGTTCACTCCTAGAATGGCT +
Preference number: 4 (lower is better)
Translates to: EQIPWAQLFPIASDKPTSRTGLL*FTPRMA
Trigger: AGCCATTCTAGGAGTGAAGCAAAGGAGTCCAGTCCT...AGAGGTTGGTTTGTCAGAGGCTATTGGGAACAGCTGGGCCCAGGGTATTTGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR GCA 90 bp TGGGCCCAGCTGTTCCCAATAGCCTCTGACAAACCAACCTCTGGACAACCTGCAAAAGGGGATGTGTCTTaGTTTTACCATGGCAATCCC +
Preference number: 4 (lower is better)
Translates to: WAQLFPIASDKPTSGQPAKGDVS*FYHGNP
Trigger: GGGATTGCCATGGTAAAAGCAAGACACATCCCCTTT...TGCAGGTTGTCCAGAGGTTGGTTTGTCAGAGGCTATTGGGAACAGCTGGGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CCA 90 bp GGTACAAATACCCCAGAAATGGTCTCACTTTGGGAAAGGCTCTGGAATCCTTCACTGTGGAACGGTGTCTaGACTGGCTGGTACCTGGAC +
Preference number: 4 (lower is better)
Translates to: GTNTPEMVSLWERLWNPSLWNGV*TGWYLD
Trigger: GTCCAGGTACCAGCCAGTCCAGACACCGTTCCACAG...TGAAGGATTCCAGAGCCTTTCCCAAAGTGAGACCATTTCTGGGGTATTTGTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CCA 90 bp GAGCAAATACCCTGGGCCCAGCTGTTCCCAATAGCCTCTGACAAACCAACCTCTTTTTCCCATTCCCAATaGAAGACTGTCCATGGAGGG +
Preference number: 4 (lower is better)
Translates to: EQIPWAQLFPIASDKPTSFSHSQ*KTVHGG
Trigger: CCCTCCATGGACAGTCTTCCATTGGGAATGGGAAAA...AGAGGTTGGTTTGTCAGAGGCTATTGGGAACAGCTGGGCCCAGGGTATTTGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CCA 90 bp TGGGCCCAGCTGTTCCCAATAGCCTCTGACAAACCAACCTCTGGACAACCTGCAGCTCATATTCTTGGTTaGCTTCACATAGCACTGGAG +
Preference number: 4 (lower is better)
Translates to: WAQLFPIASDKPTSGQPAAHILG*LHIALE
Trigger: CTCCAGTGCTATGTGAAGCCAACCAAGAATATGAGC...TGCAGGTTGTCCAGAGGTTGGTTTGTCAGAGGCTATTGGGAACAGCTGGGCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CCA 90 bp TGGGCCCAGCTGTTCCCAATAGCCTCTGACAAACCAACCTCTGGACAACCTGCATTTAGGAACAGGCACTaGACACTGATAAGCATGAGG +
Preference number: 4 (lower is better)
Translates to: WAQLFPIASDKPTSGQPAFRNRH*TLISMR
Trigger: CCTCATGCTTATCAGTGTCCAGTGCCTGTTCCTAAA...TGCAGGTTGTCCAGAGGTTGGTTTGTCAGAGGCTATTGGGAACAGCTGGGCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CCA 90 bp TGGGCCCAGCTGTTCCCAATAGCCTCTGACAAACCAACCTCTGGACAACCTGCACTTTGGGAAAGGCTCTaGAATCCTTCACAAATGCCT +
Preference number: 4 (lower is better)
Translates to: WAQLFPIASDKPTSGQPALWERL*NPSQMP
Trigger: AGGCATTTGTGAAGGATTCCAGAGCCTTTCCCAAAG...TGCAGGTTGTCCAGAGGTTGGTTTGTCAGAGGCTATTGGGAACAGCTGGGCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CCA 90 bp TGGGCCCAGCTGTTCCCAATAGCCTCTGACAAACCAACCTCTGGACAACCTGCAGAAATGGTCTCACTTTaGGAAAGGCTCTGGAATCCT +
Preference number: 4 (lower is better)
Translates to: WAQLFPIASDKPTSGQPAEMVSL*ERLWNP
Trigger: AGGATTCCAGAGCCTTTCCCAAAGTGAGACCATTTC...TGCAGGTTGTCCAGAGGTTGGTTTGTCAGAGGCTATTGGGAACAGCTGGGCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CCA 90 bp TGGGCCCAGCTGTTCCCAATAGCCTCTGACAAACCAACCTCTGGACAACCTGCACAAATACCCCAGAAATaGTCTCACTTTGGGAAAGGC +
Preference number: 4 (lower is better)
Translates to: WAQLFPIASDKPTSGQPAQIPQK*SHFGKG
Trigger: GCCTTTCCCAAAGTGAGACCATTTCTGGGGTATTTG...TGCAGGTTGTCCAGAGGTTGGTTTGTCAGAGGCTATTGGGAACAGCTGGGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CCA 90 bp GAGCAAATACCCTGGGCCCAGCTGTTCCCAATAGCCTCTGACAAACCAACCTCTGGCACCTACTACAACTaGGCTGTTTCACCAGTAAGA +
Preference number: 4 (lower is better)
Translates to: EQIPWAQLFPIASDKPTSGTYYN*AVSPVR
Trigger: TCTTACTGGTGAAACAGCCCAGTTGTAGTAGGTGCC...AGAGGTTGGTTTGTCAGAGGCTATTGGGAACAGCTGGGCCCAGGGTATTTGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CCA 90 bp TGGGCCCAGCTGTTCCCAATAGCCTCTGACAAACCAACCTCTGGACAACCTGCATTACAAGAACACAACTaGGGGAGAGGAAAACTGCTG +
Preference number: 4 (lower is better)
Translates to: WAQLFPIASDKPTSGQPALQEHN*GRGKLL
Trigger: CAGCAGTTTTCCTCTCCCCCAGTTGTGTTCTTGTAA...TGCAGGTTGTCCAGAGGTTGGTTTGTCAGAGGCTATTGGGAACAGCTGGGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR TCA 90 bp GAGCAAATACCCTGGGCCCAGCTGTTCCCAATAGCCTCTGACAAACCAACCTCTCTGTATTTTGTTGTGTaGCAGCTTCAGCTTCTCTCG +
Preference number: 4 (lower is better)
Translates to: EQIPWAQLFPIASDKPTSLYFVV*QLQLLS
Trigger: CGAGAGAAGCTGAAGCTGTCACACAACAAAATACAG...AGAGGTTGGTTTGTCAGAGGCTATTGGGAACAGCTGGGCCCAGGGTATTTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR TCA 90 bp GAAAGAAACTCAACCTTGTGCAGAACAAAGGAAGACAGTAGTGAGTTTGACAGTCCATGGAGGGCAGCCTaGAGGACCAGAGGCTTTCCC +
Preference number: 4 (lower is better)
Translates to: ERNSTLCRTKEDSSEFDSPWRAA*RTRGFP
Trigger: GGGAAAGCCTCTGGTCCTTCAGGCTGCCCTCCATGG...ACTGTCAAACTCACTACTGTCTTCCTTTGTTCTGCACAAGGTTGAGTTTCTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR TCA 90 bp GAGCAAATACCCTGGGCCCAGCTGTTCCCAATAGCCTCTGACAAACCAACCTCTAACTTGGAGTTAGGCTaGCTTTTCCCATTCCCAATG +
Preference number: 4 (lower is better)
Translates to: EQIPWAQLFPIASDKPTSNLELG*LFPFPM
Trigger: CATTGGGAATGGGAAAAGTCAGCCTAACTCCAAGTT...AGAGGTTGGTTTGTCAGAGGCTATTGGGAACAGCTGGGCCCAGGGTATTTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR TCA 90 bp GAGCAAATACCCTGGGCCCAGCTGTTCCCAATAGCCTCTGACAAACCAACCTCTATCACTTTCTGCCTCTaGATCACTCAGCTCCAAATC +
Preference number: 4 (lower is better)
Translates to: EQIPWAQLFPIASDKPTSITFCL*ITQLQI
Trigger: GATTTGGAGCTGAGTGATTCAGAGGCAGAAAGTGAT...AGAGGTTGGTTTGTCAGAGGCTATTGGGAACAGCTGGGCCCAGGGTATTTGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR TCA 90 bp GAGCAAATACCCTGGGCCCAGCTGTTCCCAATAGCCTCTGACAAACCAACCTCTACAACACAAAAACCCTaGCCTGGTACAAATACCCCA +
Preference number: 4 (lower is better)
Translates to: EQIPWAQLFPIASDKPTSTTQKP*PGTNTP
Trigger: TGGGGTATTTGTACCAGGTCAGGGTTTTTGTGTTGT...AGAGGTTGGTTTGTCAGAGGCTATTGGGAACAGCTGGGCCCAGGGTATTTGCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR TCA 90 bp TGGGCCCAGCTGTTCCCAATAGCCTCTGACAAACCAACCTCTGGACAACCTGCAGGTATAAGCAACTTCTaGAAAATGGCTCCAGCCTTT +
Preference number: 4 (lower is better)
Translates to: WAQLFPIASDKPTSGQPAGISNF*KMAPAF
Trigger: AAAGGCTGGAGCCATTTTTCAGAAGTTGCTTATACC...TGCAGGTTGTCCAGAGGTTGGTTTGTCAGAGGCTATTGGGAACAGCTGGGCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR TCA 90 bp GGTACAAATACCCCAGAAATGGTCTCACTTTGGGAAAGGCTCTGGAATCCTTCACTGAGTTTTCCATATTaGCGGAGAGAGGGCCCCTGC +
Preference number: 4 (lower is better)
Translates to: GTNTPEMVSLWERLWNPSLSFPY*RREGPC
Trigger: GCAGGGGCCCTCTCTCCGTCAATATGGAAAACTCAG...TGAAGGATTCCAGAGCCTTTCCCAAAGTGAGACCATTTCTGGGGTATTTGTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR TCA 90 bp TGGGCCCAGCTGTTCCCAATAGCCTCTGACAAACCAACCTCTGGACAACCTGCATACCGCACTGGCCTCTaGCATAAGGAATTTATAACA +
Preference number: 4 (lower is better)
Translates to: WAQLFPIASDKPTSGQPAYRTGL*HKEFIT
Trigger: TGTTATAAATTCCTTATGTCAGAGGCCAGTGCGGTA...TGCAGGTTGTCCAGAGGTTGGTTTGTCAGAGGCTATTGGGAACAGCTGGGCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR GCA 90 bp TGGGCCCAGCTGTTCCCAATAGCCTCTGACAAACCAACCTCTGGACAACCTGCATGCCTGTTTTGGCTATaGTTGAGGCAATATGACTTG +
Preference number: 4 (lower is better)
Translates to: WAQLFPIASDKPTSGQPACLFWL*LRQYDL
Trigger: CAAGTCATATTGCCTCAAGCATAGCCAAAACAGGCA...TGCAGGTTGTCCAGAGGTTGGTTTGTCAGAGGCTATTGGGAACAGCTGGGCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR GCA 90 bp GAGCAAATACCCTGGGCCCAGCTGTTCCCAATAGCCTCTGACAAACCAACCTCTGCTTCTCCAAGTTTCTaGCTGTTTTGGCTATGCTTG +
Preference number: 4 (lower is better)
Translates to: EQIPWAQLFPIASDKPTSASPSF*LFWLCL
Trigger: CAAGCATAGCCAAAACAGGCAGAAACTTGGAGAAGC...AGAGGTTGGTTTGTCAGAGGCTATTGGGAACAGCTGGGCCCAGGGTATTTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR GCA 90 bp GGTACAAATACCCCAGAAATGGTCTCACTTTGGGAAAGGCTCTGGAATCCTTCACTTTTGGCCTGGCTCTaGTCTTTAGCCCTGTGGTGG +
Preference number: 4 (lower is better)
Translates to: GTNTPEMVSLWERLWNPSLLAWL*SLALWW
Trigger: CCACCACAGGGCTAAAGAGCAGAGCCAGGCCAAAAG...TGAAGGATTCCAGAGCCTTTCCCAAAGTGAGACCATTTCTGGGGTATTTGTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR GCA 90 bp GGTACAAATACCCCAGAAATGGTCTCACTTTGGGAAAGGCTCTGGAATCCTTCACATTCCCAGACCAGCTaGCCTCCAGGCCATTGGATT +
Preference number: 4 (lower is better)
Translates to: GTNTPEMVSLWERLWNPSHSQTS*PPGHWI
Trigger: AATCCAATGGCCTGGAGGGCAGCTGGTCTGGGAATG...TGAAGGATTCCAGAGCCTTTCCCAAAGTGAGACCATTTCTGGGGTATTTGTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CCA 90 bp GGTACAAATACCCCAGAAATGGTCTCACTTTGGGAAAGGCTCTGGAATCCTTCAGGTGTCTGGACTGGCTaGTACCTGGACTCCCTTTTC +
Preference number: 4 (lower is better)
Translates to: GTNTPEMVSLWERLWNPSGVWTG*YLDSLF
Trigger: GAAAAGGGAGTCCAGGTACCAGCCAGTCCAGACACC...TGAAGGATTCCAGAGCCTTTCCCAAAGTGAGACCATTTCTGGGGTATTTGTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CCA 90 bp GAGCAAATACCCTGGGCCCAGCTGTTCCCAATAGCCTCTGACAAACCAACCTCTGCTCATATTCTTGGTTaGCTTCACATAGCACTGGAG +
Preference number: 4 (lower is better)
Translates to: EQIPWAQLFPIASDKPTSAHILG*LHIALE
Trigger: CTCCAGTGCTATGTGAAGCCAACCAAGAATATGAGC...AGAGGTTGGTTTGTCAGAGGCTATTGGGAACAGCTGGGCCCAGGGTATTTGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CCA 90 bp TGGGCCCAGCTGTTCCCAATAGCCTCTGACAAACCAACCTCTGGACAACCTGCAACTCAGCTCCAAATCTaGGCAATAGCCATCATTTTC +
Preference number: 4 (lower is better)
Translates to: WAQLFPIASDKPTSGQPATQLQI*AIAIIF
Trigger: GAAAATGATGGCTATTGCCCAGATTTGGAGCTGAGT...TGCAGGTTGTCCAGAGGTTGGTTTGTCAGAGGCTATTGGGAACAGCTGGGCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CCA 90 bp GAGCAAATACCCTGGGCCCAGCTGTTCCCAATAGCCTCTGACAAACCAACCTCTCTTTGCATTGAACTGTaGGAAAGGGGATGTGTCTTG +
Preference number: 4 (lower is better)
Translates to: EQIPWAQLFPIASDKPTSLCIEL*ERGCVL
Trigger: CAAGACACATCCCCTTTCCCACAGTTCAATGCAAAG...AGAGGTTGGTTTGTCAGAGGCTATTGGGAACAGCTGGGCCCAGGGTATTTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CCA 90 bp GAGCAAATACCCTGGGCCCAGCTGTTCCCAATAGCCTCTGACAAACCAACCTCTGTTTTCCCCAATATATaGGGCAAAGGCAAAGGTTGG +
Preference number: 4 (lower is better)
Translates to: EQIPWAQLFPIASDKPTSVFPNI*GKGKGW
Trigger: CCAACCTTTGCCTTTGCCCCATATATTGGGGAAAAC...AGAGGTTGGTTTGTCAGAGGCTATTGGGAACAGCTGGGCCCAGGGTATTTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CCA 90 bp GAGCAAATACCCTGGGCCCAGCTGTTCCCAATAGCCTCTGACAAACCAACCTCTCAAATACCCCAGAAATaGTCTCACTTTGGGAAAGGC +
Preference number: 4 (lower is better)
Translates to: EQIPWAQLFPIASDKPTSQIPQK*SHFGKG
Trigger: GCCTTTCCCAAAGTGAGACCATTTCTGGGGTATTTG...AGAGGTTGGTTTGTCAGAGGCTATTGGGAACAGCTGGGCCCAGGGTATTTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CCA 90 bp GAGCAAATACCCTGGGCCCAGCTGTTCCCAATAGCCTCTGACAAACCAACCTCTTTACAAGAACACAACTaGGGGAGAGGAAAACTGCTG +
Preference number: 4 (lower is better)
Translates to: EQIPWAQLFPIASDKPTSLQEHN*GRGKLL
Trigger: CAGCAGTTTTCCTCTCCCCCAGTTGTGTTCTTGTAA...AGAGGTTGGTTTGTCAGAGGCTATTGGGAACAGCTGGGCCCAGGGTATTTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR TCA 90 bp GGTACAAATACCCCAGAAATGGTCTCACTTTGGGAAAGGCTCTGGAATCCTTCAAACTGTCACTGCTGCTaGCAGGCCTATGGCGTTTCA +
Preference number: 4 (lower is better)
Translates to: GTNTPEMVSLWERLWNPSNCHCC*QAYGVS
Trigger: TGAAACGCCATAGGCCTGTCAGCAGCAGTGACAGTT...TGAAGGATTCCAGAGCCTTTCCCAAAGTGAGACCATTTCTGGGGTATTTGTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR TCA 90 bp TGGGCCCAGCTGTTCCCAATAGCCTCTGACAAACCAACCTCTGGACAACCTGCATCAGGATTAATGTGGTaGGAATCTGGAAGTTTCATG +
Preference number: 4 (lower is better)
Translates to: WAQLFPIASDKPTSGQPASGLMW*ESGSFM
Trigger: CATGAAACTTCCAGATTCTCACCACATTAATCCTGA...TGCAGGTTGTCCAGAGGTTGGTTTGTCAGAGGCTATTGGGAACAGCTGGGCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR TCA 90 bp GGTACAAATACCCCAGAAATGGTCTCACTTTGGGAAAGGCTCTGGAATCCTTCATGTGGGAGATCTTCGTaGTCGGTTCCATCCTCTCAG +
Preference number: 4 (lower is better)
Translates to: GTNTPEMVSLWERLWNPSCGRSS*SVPSSQ
Trigger: CTGAGAGGATGGAACCGATCACGAAGATCTCCCACA...TGAAGGATTCCAGAGCCTTTCCCAAAGTGAGACCATTTCTGGGGTATTTGTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR TCA 90 bp CCAAACAAAATACAGGACACCTACCACACATGCTATGGCATGTTTACACATGTAGGAGAGTGGGGCTGCTaGTCGGTTTCTGTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: PNKIQDTYHTCYGMFTHVGEWGC*SVSVEL
Trigger: CAGCTCCACAGAAACCGATCAGCAGCCCCACTCTCC...TACATGTGTAAACATGCCATAGCATGTGTGGTAGGTGTCCTGTATTTTGTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR TCA 90 bp TTTTTCCCAAACAAAATACAGGACACCTACCACACATGCTATGGCATGTTTACACCATGGAGGGCAGCCTaGAGGACCAGAGGCTTTCCC +
Preference number: 4 (lower is better)
Translates to: FFPNKIQDTYHTCYGMFTPWRAA*RTRGFP
Trigger: GGGAAAGCCTCTGGTCCTTCAGGCTGCCCTCCATGG...TGTAAACATGCCATAGCATGTGTGGTAGGTGTCCTGTATTTTGTTTGGGAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR TCA 90 bp GGTACAAATACCCCAGAAATGGTCTCACTTTGGGAAAGGCTCTGGAATCCTTCAAGCTGTCTTTTTGGGTaGCATTCCCAGACCAGCTGC +
Preference number: 4 (lower is better)
Translates to: GTNTPEMVSLWERLWNPSSCLFG*HSQTSC
Trigger: GCAGCTGGTCTGGGAATGTCACCCAAAAAGACAGCT...TGAAGGATTCCAGAGCCTTTCCCAAAGTGAGACCATTTCTGGGGTATTTGTACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR TCA 90 bp GAGCAAATACCCTGGGCCCAGCTGTTCCCAATAGCCTCTGACAAACCAACCTCTGGTATAAGCAACTTCTaGAAAATGGCTCCAGCCTTT +
Preference number: 4 (lower is better)
Translates to: EQIPWAQLFPIASDKPTSGISNF*KMAPAF
Trigger: AAAGGCTGGAGCCATTTTTCAGAAGTTGCTTATACC...AGAGGTTGGTTTGTCAGAGGCTATTGGGAACAGCTGGGCCCAGGGTATTTGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR TCA 90 bp TGGGCCCAGCTGTTCCCAATAGCCTCTGACAAACCAACCTCTGGACAACCTGCAATGGCCTCTTTTGTCTaGATATTCCCACTACACTTT +
Preference number: 4 (lower is better)
Translates to: WAQLFPIASDKPTSGQPAMASFV*IFPLHF
Trigger: AAAGTGTAGTGGGAATATTCAGACAAAAGAGGCCAT...TGCAGGTTGTCCAGAGGTTGGTTTGTCAGAGGCTATTGGGAACAGCTGGGCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR TCA 90 bp GAAAGAAACTCAACCTTGTGCAGAACAAAGGAAGACAGTAGTGAGTTTGACAGTAGAGGGCCCCTGCCTTaGCTGACTGGCACCTACTAC +
Preference number: 4 (lower is better)
Translates to: ERNSTLCRTKEDSSEFDSRGPLP*LTGTYY
Trigger: GTAGTAGGTGCCAGTCAGTCAAGGCAGGGGCCCTCT...ACTGTCAAACTCACTACTGTCTTCCTTTGTTCTGCACAAGGTTGAGTTTCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR GCA 90 bp GGTACAAATACCCCAGAAATGGTCTCACTTTGGGAAAGGCTCTGGAATCCTTCATTCATCTCTAGGCCGTaGTCAAAGGCACAGGTGACG +
Preference number: 4 (lower is better)
Translates to: GTNTPEMVSLWERLWNPSFISRP*SKAQVT
Trigger: CGTCACCTGTGCCTTTGAGCACGGCCTAGAGATGAA...TGAAGGATTCCAGAGCCTTTCCCAAAGTGAGACCATTTCTGGGGTATTTGTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR GCA 90 bp GGTACAAATACCCCAGAAATGGTCTCACTTTGGGAAAGGCTCTGGAATCCTTCATGTGAACAGATGAGCTaGTGTCAGGAGAGTGGGGCT +
Preference number: 4 (lower is better)
Translates to: GTNTPEMVSLWERLWNPSCEQMS*CQESGA
Trigger: AGCCCCACTCTCCTGACAGCAGCTCATCTGTTCACA...TGAAGGATTCCAGAGCCTTTCCCAAAGTGAGACCATTTCTGGGGTATTTGTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR GCA 90 bp GAGCAAATACCCTGGGCCCAGCTGTTCCCAATAGCCTCTGACAAACCAACCTCTGACACCTACCACACATaGTATGGCATGTTTACACAT +
Preference number: 4 (lower is better)
Translates to: EQIPWAQLFPIASDKPTSDTYHT*YGMFTH
Trigger: ATGTGTAAACATGCCATAGCATGTGTGGTAGGTGTC...AGAGGTTGGTTTGTCAGAGGCTATTGGGAACAGCTGGGCCCAGGGTATTTGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CCA 90 bp GGTACAAATACCCCAGAAATGGTCTCACTTTGGGAAAGGCTCTGGAATCCTTCACTGCTGACAGGCCTATaGCGTTTCATCCTGGAGCAT +
Preference number: 4 (lower is better)
Translates to: GTNTPEMVSLWERLWNPSLLTGL*RFILEH
Trigger: ATGCTCCAGGATGAAACGCCATAGGCCTGTCAGCAG...TGAAGGATTCCAGAGCCTTTCCCAAAGTGAGACCATTTCTGGGGTATTTGTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CCA 90 bp TGGGCCCAGCTGTTCCCAATAGCCTCTGACAAACCAACCTCTGGACAACCTGCAAGTTTCTGCCTGTTTTaGCTATGCTTGAGGCAATAT +
Preference number: 4 (lower is better)
Translates to: WAQLFPIASDKPTSGQPASFCLF*LCLRQY
Trigger: ATATTGCCTCAAGCATAGCCAAAACAGGCAGAAACT...TGCAGGTTGTCCAGAGGTTGGTTTGTCAGAGGCTATTGGGAACAGCTGGGCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CCA 90 bp GAAAGAAACTCAACCTTGTGCAGAACAAAGGAAGACAGTAGTGAGTTTGACAGTAGTCCACAGCTAGCGTaGGCATACCCAGCTCTGCGG +
Preference number: 4 (lower is better)
Translates to: ERNSTLCRTKEDSSEFDSSPQLA*AYPALR
Trigger: CCGCAGAGCTGGGTATGCCCACGCTAGCTGTGGACT...ACTGTCAAACTCACTACTGTCTTCCTTTGTTCTGCACAAGGTTGAGTTTCTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CCA 90 bp TGGGCCCAGCTGTTCCCAATAGCCTCTGACAAACCAACCTCTGGACAACCTGCAAGGTTGGGTCATCCTTaGAAGTTTCTAATCACCTTT +
Preference number: 4 (lower is better)
Translates to: WAQLFPIASDKPTSGQPARLGHP*KFLITF
Trigger: AAAGGTGATTAGAAACTTCCAAGGATGACCCAACCT...TGCAGGTTGTCCAGAGGTTGGTTTGTCAGAGGCTATTGGGAACAGCTGGGCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CCA 90 bp GAGCAAATACCCTGGGCCCAGCTGTTCCCAATAGCCTCTGACAAACCAACCTCTTCAAGGCTGATAGTTTaGGAACAGGGTATAAGCAAC +
Preference number: 4 (lower is better)
Translates to: EQIPWAQLFPIASDKPTSSRLIV*EQGISN
Trigger: GTTGCTTATACCCTGTTCCCAAACTATCAGCCTTGA...AGAGGTTGGTTTGTCAGAGGCTATTGGGAACAGCTGGGCCCAGGGTATTTGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR TCA 90 bp GAGCAAATACCCTGGGCCCAGCTGTTCCCAATAGCCTCTGACAAACCAACCTCTTGGTGGGTAAAACAGTaGGTTTTCAAGTGCATTTGT +
Preference number: 4 (lower is better)
Translates to: EQIPWAQLFPIASDKPTSWWVKQ*VFKCIC
Trigger: ACAAATGCACTTGAAAACTCACTGTTTTACCCACCA...AGAGGTTGGTTTGTCAGAGGCTATTGGGAACAGCTGGGCCCAGGGTATTTGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR TCA 90 bp TGGGCCCAGCTGTTCCCAATAGCCTCTGACAAACCAACCTCTGGACAACCTGCACATTTGAAAAAGGACTaGGCTTATCTTGGAAAACTG +
Preference number: 4 (lower is better)
Translates to: WAQLFPIASDKPTSGQPAHLKKD*AYLGKL
Trigger: CAGTTTTCCAAGATAAGCTCAGTCCTTTTTCAAATG...TGCAGGTTGTCCAGAGGTTGGTTTGTCAGAGGCTATTGGGAACAGCTGGGCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR GCA 90 bp GGTACAAATACCCCAGAAATGGTCTCACTTTGGGAAAGGCTCTGGAATCCTTCATCAACTTGCACAAGTTaGAGACTAAGGCCCACCGAC +
Preference number: 4 (lower is better)
Translates to: GTNTPEMVSLWERLWNPSSTCTS*RLRPTD
Trigger: GTCGGTGGGCCTTAGTCTGCAACTTGTGCAAGTTGA...TGAAGGATTCCAGAGCCTTTCCCAAAGTGAGACCATTTCTGGGGTATTTGTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR GCA 90 bp TTTTTCCCAAACAAAATACAGGACACCTACCACACATGCTATGGCATGTTTACAGGGCATACCCAGCTCTaGGGCCACATCTTCCACTCG +
Preference number: 4 (lower is better)
Translates to: FFPNKIQDTYHTCYGMFTGHTQL*GHIFHS
Trigger: CGAGTGGAAGATGTGGCCGCAGAGCTGGGTATGCCC...TGTAAACATGCCATAGCATGTGTGGTAGGTGTCCTGTATTTTGTTTGGGAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CCA 90 bp GAAAGAAACTCAACCTTGTGCAGAACAAAGGAAGACAGTAGTGAGTTTGACAGTGAACGGTGTCTGGACTaGCTGGTACCTGGACTCCCT +
Preference number: 4 (lower is better)
Translates to: ERNSTLCRTKEDSSEFDSERCLD*LVPGLP
Trigger: AGGGAGTCCAGGTACCAGCCAGTCCAGACACCGTTC...ACTGTCAAACTCACTACTGTCTTCCTTTGTTCTGCACAAGGTTGAGTTTCTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CCA 90 bp CCAAACAAAATACAGGACACCTACCACACATGCTATGGCATGTTTACACATGTACTGTGGAACGGTGTCTaGACTGGCTGGTACCTGGAC +
Preference number: 4 (lower is better)
Translates to: PNKIQDTYHTCYGMFTHVLWNGV*TGWYLD
Trigger: GTCCAGGTACCAGCCAGTCCAGACACCGTTCCACAG...TACATGTGTAAACATGCCATAGCATGTGTGGTAGGTGTCCTGTATTTTGTTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CCA 90 bp GAAAGAAACTCAACCTTGTGCAGAACAAAGGAAGACAGTAGTGAGTTTGACAGTCCTGAGAGAAGGCTGTaGAACGGTGTCTGGACTGGC +
Preference number: 4 (lower is better)
Translates to: ERNSTLCRTKEDSSEFDSPERRL*NGVWTG
Trigger: GCCAGTCCAGACACCGTTCCACAGCCTTCTCTCAGG...ACTGTCAAACTCACTACTGTCTTCCTTTGTTCTGCACAAGGTTGAGTTTCTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CCA 90 bp GGTACAAATACCCCAGAAATGGTCTCACTTTGGGAAAGGCTCTGGAATCCTTCACTGTGGTGTCTGGGCTaGAGCAGTGAATATACTTCC +
Preference number: 4 (lower is better)
Translates to: GTNTPEMVSLWERLWNPSLWCLG*SSEYTS
Trigger: GGAAGTATATTCACTGCTCCAGCCCAGACACCACAG...TGAAGGATTCCAGAGCCTTTCCCAAAGTGAGACCATTTCTGGGGTATTTGTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CCA 90 bp GAAAGAAACTCAACCTTGTGCAGAACAAAGGAAGACAGTAGTGAGTTTGACAGTTGTAGCCAGGCTCTGTaGTGTCTGGGCTGGAGCAGT +
Preference number: 4 (lower is better)
Translates to: ERNSTLCRTKEDSSEFDSCSQAL*CLGWSS
Trigger: ACTGCTCCAGCCCAGACACCACAGAGCCTGGCTACA...ACTGTCAAACTCACTACTGTCTTCCTTTGTTCTGCACAAGGTTGAGTTTCTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CCA 90 bp GAGCAAATACCCTGGGCCCAGCTGTTCCCAATAGCCTCTGACAAACCAACCTCTAGTTTCTGCCTGTTTTaGCTATGCTTGAGGCAATAT +
Preference number: 4 (lower is better)
Translates to: EQIPWAQLFPIASDKPTSSFCLF*LCLRQY
Trigger: ATATTGCCTCAAGCATAGCCAAAACAGGCAGAAACT...AGAGGTTGGTTTGTCAGAGGCTATTGGGAACAGCTGGGCCCAGGGTATTTGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CCA 90 bp GGTACAAATACCCCAGAAATGGTCTCACTTTGGGAAAGGCTCTGGAATCCTTCACTGAACACAGGCTCCTaGTCACAGAACATCTCACTC +
Preference number: 4 (lower is better)
Translates to: GTNTPEMVSLWERLWNPSLNTGS*SQNISL
Trigger: GAGTGAGATGTTCTGTGACCAGGAGCCTGTGTTCAG...TGAAGGATTCCAGAGCCTTTCCCAAAGTGAGACCATTTCTGGGGTATTTGTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CCA 90 bp GAGCAAATACCCTGGGCCCAGCTGTTCCCAATAGCCTCTGACAAACCAACCTCTCAATGGCATTACATATaGAATTTGGCTGAAGCACTG +
Preference number: 4 (lower is better)
Translates to: EQIPWAQLFPIASDKPTSQWHYI*NLAEAL
Trigger: CAGTGCTTCAGCCAAATTCCATATGTAATGCCATTG...AGAGGTTGGTTTGTCAGAGGCTATTGGGAACAGCTGGGCCCAGGGTATTTGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR TCA 90 bp TTTTTCCCAAACAAAATACAGGACACCTACCACACATGCTATGGCATGTTTACATCTGGGCTGGAGCAGTaGATATACTTCCGGGGTCGG +
Preference number: 4 (lower is better)
Translates to: FFPNKIQDTYHTCYGMFTSGLEQ*IYFRGR
Trigger: CCGACCCCGGAAGTATATTCACTGCTCCAGCCCAGA...TGTAAACATGCCATAGCATGTGTGGTAGGTGTCCTGTATTTTGTTTGGGAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR TCA 90 bp GAAAGAAACTCAACCTTGTGCAGAACAAAGGAAGACAGTAGTGAGTTTGACAGTCAGAGGCTTTCCCAGTaGCTGCCCATGATAGCACTC +
Preference number: 4 (lower is better)
Translates to: ERNSTLCRTKEDSSEFDSQRLSQ*LPMIAL
Trigger: GAGTGCTATCATGGGCAGTCACTGGGAAAGCCTCTG...ACTGTCAAACTCACTACTGTCTTCCTTTGTTCTGCACAAGGTTGAGTTTCTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR TCA 90 bp GAAAGAAACTCAACCTTGTGCAGAACAAAGGAAGACAGTAGTGAGTTTGACAGTTTTCTAAAGCTGCCCTaGCTGACCAAGTGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: ERNSTLCRTKEDSSEFDSFLKLP*LTKWGL
Trigger: CAGCCCCCACTTGGTCAGTCAGGGCAGCTTTAGAAA...ACTGTCAAACTCACTACTGTCTTCCTTTGTTCTGCACAAGGTTGAGTTTCTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR TCA 90 bp CCAAACAAAATACAGGACACCTACCACACATGCTATGGCATGTTTACACATGTATTTCTAAAGCTGCCCTaGCTGACCAAGTGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: PNKIQDTYHTCYGMFTHVFLKLP*LTKWGL
Trigger: CAGCCCCCACTTGGTCAGTCAGGGCAGCTTTAGAAA...TACATGTGTAAACATGCCATAGCATGTGTGGTAGGTGTCCTGTATTTTGTTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR GCA 90 bp CCAAACAAAATACAGGACACCTACCACACATGCTATGGCATGTTTACACATGTACTTTTGGCCTGGCTCTaGTCTTTAGCCCTGTGGTGG +
Preference number: 4 (lower is better)
Translates to: PNKIQDTYHTCYGMFTHVLLAWL*SLALWW
Trigger: CCACCACAGGGCTAAAGAGCAGAGCCAGGCCAAAAG...TACATGTGTAAACATGCCATAGCATGTGTGGTAGGTGTCCTGTATTTTGTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR GCA 90 bp CCAAACAAAATACAGGACACCTACCACACATGCTATGGCATGTTTACACATGTACATTCCCAGACCAGCTaGCCTCCAGGCCATTGGATT +
Preference number: 4 (lower is better)
Translates to: PNKIQDTYHTCYGMFTHVHSQTS*PPGHWI
Trigger: AATCCAATGGCCTGGAGGGCAGCTGGTCTGGGAATG...TACATGTGTAAACATGCCATAGCATGTGTGGTAGGTGTCCTGTATTTTGTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR GCA 90 bp GAAAGAAACTCAACCTTGTGCAGAACAAAGGAAGACAGTAGTGAGTTTGACAGTATATGGAGCTCTCCCTaGAGACCGCCTGAGAACCTG +
Preference number: 4 (lower is better)
Translates to: ERNSTLCRTKEDSSEFDSIWSSP*RPPENL
Trigger: CAGGTTCTCAGGCGGTCTGCAGGGAGAGCTCCATAT...ACTGTCAAACTCACTACTGTCTTCCTTTGTTCTGCACAAGGTTGAGTTTCTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CCA 90 bp CCAAACAAAATACAGGACACCTACCACACATGCTATGGCATGTTTACACATGTAGGTGTCTGGACTGGCTaGTACCTGGACTCCCTTTTC +
Preference number: 4 (lower is better)
Translates to: PNKIQDTYHTCYGMFTHVGVWTG*YLDSLF
Trigger: GAAAAGGGAGTCCAGGTACCAGCCAGTCCAGACACC...TACATGTGTAAACATGCCATAGCATGTGTGGTAGGTGTCCTGTATTTTGTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CCA 90 bp CCAAACAAAATACAGGACACCTACCACACATGCTATGGCATGTTTACACATGTACGACTGGGTGGGATGTaGGAGATCTTCGTGATCGGT +
Preference number: 4 (lower is better)
Translates to: PNKIQDTYHTCYGMFTHVRLGGM*EIFVIG
Trigger: ACCGATCACGAAGATCTCCCACATCCCACCCAGTCG...TACATGTGTAAACATGCCATAGCATGTGTGGTAGGTGTCCTGTATTTTGTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CCA 90 bp GAAAGAAACTCAACCTTGTGCAGAACAAAGGAAGACAGTAGTGAGTTTGACAGTCGACTGGGTGGGATGTaGGAGATCTTCGTGATCGGT +
Preference number: 4 (lower is better)
Translates to: ERNSTLCRTKEDSSEFDSRLGGM*EIFVIG
Trigger: ACCGATCACGAAGATCTCCCACATCCCACCCAGTCG...ACTGTCAAACTCACTACTGTCTTCCTTTGTTCTGCACAAGGTTGAGTTTCTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CCA 90 bp TTTTTCCCAAACAAAATACAGGACACCTACCACACATGCTATGGCATGTTTACACTAAGGCCCACCGACTaGGTGGGATGTGGGAGATCT +
Preference number: 4 (lower is better)
Translates to: FFPNKIQDTYHTCYGMFTLRPTD*VGCGRS
Trigger: AGATCTCCCACATCCCACCCAGTCGGTGGGCCTTAG...TGTAAACATGCCATAGCATGTGTGGTAGGTGTCCTGTATTTTGTTTGGGAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CCA 90 bp GGTACAAATACCCCAGAAATGGTCTCACTTTGGGAAAGGCTCTGGAATCCTTCAATCATTTTCCTGATATaGAGCTCTCCCTGCAGACCG +
Preference number: 4 (lower is better)
Translates to: GTNTPEMVSLWERLWNPSIIFLI*SSPCRP
Trigger: CGGTCTGCAGGGAGAGCTCCATATCAGGAAAATGAT...TGAAGGATTCCAGAGCCTTTCCCAAAGTGAGACCATTTCTGGGGTATTTGTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR TCA 90 bp CCAAACAAAATACAGGACACCTACCACACATGCTATGGCATGTTTACACATGTAAACTGTCACTGCTGCTaGCAGGCCTATGGCGTTTCA +
Preference number: 4 (lower is better)
Translates to: PNKIQDTYHTCYGMFTHVNCHCC*QAYGVS
Trigger: TGAAACGCCATAGGCCTGTCAGCAGCAGTGACAGTT...TACATGTGTAAACATGCCATAGCATGTGTGGTAGGTGTCCTGTATTTTGTTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR TCA 90 bp CCAAACAAAATACAGGACACCTACCACACATGCTATGGCATGTTTACACATGTAGGAAGGACTTTCGTCTaGACTGTCACTGCTGCTGAC +
Preference number: 4 (lower is better)
Translates to: PNKIQDTYHTCYGMFTHVGRTFV*TVTAAD
Trigger: GTCAGCAGCAGTGACAGTTCAGACGAAAGTCCTTCC...TACATGTGTAAACATGCCATAGCATGTGTGGTAGGTGTCCTGTATTTTGTTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR TCA 90 bp GAAAGAAACTCAACCTTGTGCAGAACAAAGGAAGACAGTAGTGAGTTTGACAGTTGTGGGAGATCTTCGTaGTCGGTTCCATCCTCTCAG +
Preference number: 4 (lower is better)
Translates to: ERNSTLCRTKEDSSEFDSCGRSS*SVPSSQ
Trigger: CTGAGAGGATGGAACCGATCACGAAGATCTCCCACA...ACTGTCAAACTCACTACTGTCTTCCTTTGTTCTGCACAAGGTTGAGTTTCTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR GCA 90 bp GGTACAAATACCCCAGAAATGGTCTCACTTTGGGAAAGGCTCTGGAATCCTTCAATAGCGGCAAACAGATaGTGCCAACTCCATGATGTT +
Preference number: 4 (lower is better)
Translates to: GTNTPEMVSLWERLWNPSIAANR*CQLHDV
Trigger: AACATCATGGAGTTGGCAGCATCTGTTTGCCGCTAT...TGAAGGATTCCAGAGCCTTTCCCAAAGTGAGACCATTTCTGGGGTATTTGTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR GCA 90 bp GAAAGAAACTCAACCTTGTGCAGAACAAAGGAAGACAGTAGTGAGTTTGACAGTCACATTGCGGATAAATaGCCAGGACACAGGAGCGAC +
Preference number: 4 (lower is better)
Translates to: ERNSTLCRTKEDSSEFDSHIADK*PGHRSD
Trigger: GTCGCTCCTGTGTCCTGGGCATTTATCCGCAATGTG...ACTGTCAAACTCACTACTGTCTTCCTTTGTTCTGCACAAGGTTGAGTTTCTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR GCA 90 bp GGTACAAATACCCCAGAAATGGTCTCACTTTGGGAAAGGCTCTGGAATCCTTCAGCAAACGGTTATTCTTaGTCTCTAGTGGGTATCTCG +
Preference number: 4 (lower is better)
Translates to: GTNTPEMVSLWERLWNPSANGYS*SLVGIS
Trigger: CGAGATACCCACTAGAGAGCAAGAATAACCGTTTGC...TGAAGGATTCCAGAGCCTTTCCCAAAGTGAGACCATTTCTGGGGTATTTGTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CCA 90 bp GAAAGAAACTCAACCTTGTGCAGAACAAAGGAAGACAGTAGTGAGTTTGACAGTCCCTTCTTCACTGTCTaGAGACCGGCACACATCACA +
Preference number: 4 (lower is better)
Translates to: ERNSTLCRTKEDSSEFDSPFFTV*RPAHIT
Trigger: TGTGATGTGTGCCGGTCTCCAGACAGTGAAGAAGGG...ACTGTCAAACTCACTACTGTCTTCCTTTGTTCTGCACAAGGTTGAGTTTCTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CCA 90 bp CCAAACAAAATACAGGACACCTACCACACATGCTATGGCATGTTTACACATGTATCTTTAGCCCTGTGGTaGGGGTACTCAGCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: PNKIQDTYHTCYGMFTHVSLALW*GYSASP
Trigger: TGGAGAAGCTGAGTACCCCCACCACAGGGCTAAAGA...TACATGTGTAAACATGCCATAGCATGTGTGGTAGGTGTCCTGTATTTTGTTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CCA 90 bp GAAAGAAACTCAACCTTGTGCAGAACAAAGGAAGACAGTAGTGAGTTTGACAGTTCTTTAGCCCTGTGGTaGGGGTACTCAGCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: ERNSTLCRTKEDSSEFDSSLALW*GYSASP
Trigger: TGGAGAAGCTGAGTACCCCCACCACAGGGCTAAAGA...ACTGTCAAACTCACTACTGTCTTCCTTTGTTCTGCACAAGGTTGAGTTTCTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CCA 90 bp GGTACAAATACCCCAGAAATGGTCTCACTTTGGGAAAGGCTCTGGAATCCTTCATGGGGCTCATATTCTTaGTTGGCTTCACATAGCACT +
Preference number: 4 (lower is better)
Translates to: GTNTPEMVSLWERLWNPSWGSYS*LASHST
Trigger: AGTGCTATGTGAAGCCAACCAAGAATATGAGCCCCA...TGAAGGATTCCAGAGCCTTTCCCAAAGTGAGACCATTTCTGGGGTATTTGTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR TCA 90 bp TTTTTCCCAAACAAAATACAGGACACCTACCACACATGCTATGGCATGTTTACAGGAAGGACTTTCGTCTaGACTGTCACTGCTGCTGAC +
Preference number: 4 (lower is better)
Translates to: FFPNKIQDTYHTCYGMFTGRTFV*TVTAAD
Trigger: GTCAGCAGCAGTGACAGTTCAGACGAAAGTCCTTCC...TGTAAACATGCCATAGCATGTGTGGTAGGTGTCCTGTATTTTGTTTGGGAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR TCA 90 bp GGTACAAATACCCCAGAAATGGTCTCACTTTGGGAAAGGCTCTGGAATCCTTCAATGCTTGAGGCAATATaGCTTGAACTTCACTTCGTC +
Preference number: 4 (lower is better)
Translates to: GTNTPEMVSLWERLWNPSMLEAI*LELHFV
Trigger: GACGAAGTGAAGTTCAAGTCATATTGCCTCAAGCAT...TGAAGGATTCCAGAGCCTTTCCCAAAGTGAGACCATTTCTGGGGTATTTGTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR TCA 90 bp TTTTTCCCAAACAAAATACAGGACACCTACCACACATGCTATGGCATGTTTACAAGCTGTCTTTTTGGGTaGCATTCCCAGACCAGCTGC +
Preference number: 4 (lower is better)
Translates to: FFPNKIQDTYHTCYGMFTSCLFG*HSQTSC
Trigger: GCAGCTGGTCTGGGAATGTCACCCAAAAAGACAGCT...TGTAAACATGCCATAGCATGTGTGGTAGGTGTCCTGTATTTTGTTTGGGAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR TCA 90 bp CCAAACAAAATACAGGACACCTACCACACATGCTATGGCATGTTTACACATGTAGTTCCCAATAGCCTCTaGCAAACCAACCTCTGGACA +
Preference number: 4 (lower is better)
Translates to: PNKIQDTYHTCYGMFTHVVPNSL*QTNLWT
Trigger: TGTCCAGAGGTTGGTTTGTCAGAGGCTATTGGGAAC...TACATGTGTAAACATGCCATAGCATGTGTGGTAGGTGTCCTGTATTTTGTTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR TCA 90 bp GGTACAAATACCCCAGAAATGGTCTCACTTTGGGAAAGGCTCTGGAATCCTTCATACCGCACTGGCCTCTaGCATAAGGAATTTATAACA +
Preference number: 4 (lower is better)
Translates to: GTNTPEMVSLWERLWNPSYRTGL*HKEFIT
Trigger: TGTTATAAATTCCTTATGTCAGAGGCCAGTGCGGTA...TGAAGGATTCCAGAGCCTTTCCCAAAGTGAGACCATTTCTGGGGTATTTGTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR GCA 90 bp GGTACAAATACCCCAGAAATGGTCTCACTTTGGGAAAGGCTCTGGAATCCTTCAAGGTCCTGGCGTAGATaGATAAACATTCTCATTCGA +
Preference number: 4 (lower is better)
Translates to: GTNTPEMVSLWERLWNPSRSWRR*INILIR
Trigger: TCGAATGAGAATGTTTATGCATCTACGCCAGGACCT...TGAAGGATTCCAGAGCCTTTCCCAAAGTGAGACCATTTCTGGGGTATTTGTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR GCA 90 bp TTTTTCCCAAACAAAATACAGGACACCTACCACACATGCTATGGCATGTTTACATGTGAACAGATGAGCTaGTGTCAGGAGAGTGGGGCT +
Preference number: 4 (lower is better)
Translates to: FFPNKIQDTYHTCYGMFTCEQMS*CQESGA
Trigger: AGCCCCACTCTCCTGACAGCAGCTCATCTGTTCACA...TGTAAACATGCCATAGCATGTGTGGTAGGTGTCCTGTATTTTGTTTGGGAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR GCA 90 bp GAAAGAAACTCAACCTTGTGCAGAACAAAGGAAGACAGTAGTGAGTTTGACAGTTGTCTACCCCAGAACTaGTCCTTGGGGCTCATATTC +
Preference number: 4 (lower is better)
Translates to: ERNSTLCRTKEDSSEFDSCLPQN*SLGLIF
Trigger: GAATATGAGCCCCAAGGAGCAGTTCTGGGGTAGACA...ACTGTCAAACTCACTACTGTCTTCCTTTGTTCTGCACAAGGTTGAGTTTCTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR GCA 90 bp GGTACAAATACCCCAGAAATGGTCTCACTTTGGGAAAGGCTCTGGAATCCTTCAGACACCTACCACACATaGTATGGCATGTTTACACAT +
Preference number: 4 (lower is better)
Translates to: GTNTPEMVSLWERLWNPSDTYHT*YGMFTH
Trigger: ATGTGTAAACATGCCATAGCATGTGTGGTAGGTGTC...TGAAGGATTCCAGAGCCTTTCCCAAAGTGAGACCATTTCTGGGGTATTTGTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CCA 90 bp GAAAGAAACTCAACCTTGTGCAGAACAAAGGAAGACAGTAGTGAGTTTGACAGTCTGTGGTGTCTGGGCTaGAGCAGTGAATATACTTCC +
Preference number: 4 (lower is better)
Translates to: ERNSTLCRTKEDSSEFDSLWCLG*SSEYTS
Trigger: GGAAGTATATTCACTGCTCCAGCCCAGACACCACAG...ACTGTCAAACTCACTACTGTCTTCCTTTGTTCTGCACAAGGTTGAGTTTCTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CCA 90 bp TTTTTCCCAAACAAAATACAGGACACCTACCACACATGCTATGGCATGTTTACATCTGTGCCCGCAGGCTaGTTTTCTCACTTTTGGCCT +
Preference number: 4 (lower is better)
Translates to: FFPNKIQDTYHTCYGMFTSVPAG*FSHFWP
Trigger: AGGCCAAAAGTGAGAAAACCAGCCTGCGGGCACAGA...TGTAAACATGCCATAGCATGTGTGGTAGGTGTCCTGTATTTTGTTTGGGAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CCA 90 bp GAAAGAAACTCAACCTTGTGCAGAACAAAGGAAGACAGTAGTGAGTTTGACAGTGCTTCACTCCTAGAATaGCTGAGACTGGCCAGCAAA +
Preference number: 4 (lower is better)
Translates to: ERNSTLCRTKEDSSEFDSASLLE*LRLASK
Trigger: TTTGCTGGCCAGTCTCAGCCATTCTAGGAGTGAAGC...ACTGTCAAACTCACTACTGTCTTCCTTTGTTCTGCACAAGGTTGAGTTTCTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CCA 90 bp CCAAACAAAATACAGGACACCTACCACACATGCTATGGCATGTTTACACATGTAGCTTCACTCCTAGAATaGCTGAGACTGGCCAGCAAA +
Preference number: 4 (lower is better)
Translates to: PNKIQDTYHTCYGMFTHVASLLE*LRLASK
Trigger: TTTGCTGGCCAGTCTCAGCCATTCTAGGAGTGAAGC...TACATGTGTAAACATGCCATAGCATGTGTGGTAGGTGTCCTGTATTTTGTTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CCA 90 bp GAAAGAAACTCAACCTTGTGCAGAACAAAGGAAGACAGTAGTGAGTTTGACAGTTTCTCCAAGCAGGACTaGACTCCTTTGCTTCACTCC +
Preference number: 4 (lower is better)
Translates to: ERNSTLCRTKEDSSEFDSFSKQD*TPLLHS
Trigger: GGAGTGAAGCAAAGGAGTCCAGTCCTGCTTGGAGAA...ACTGTCAAACTCACTACTGTCTTCCTTTGTTCTGCACAAGGTTGAGTTTCTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CCA 90 bp GAAAGAAACTCAACCTTGTGCAGAACAAAGGAAGACAGTAGTGAGTTTGACAGTCCCAGAACTGCTCCTTaGGGCTCATATTCTTGGTTG +
Preference number: 4 (lower is better)
Translates to: ERNSTLCRTKEDSSEFDSPRTAP*GSYSWL
Trigger: CAACCAAGAATATGAGCCCCAAGGAGCAGTTCTGGG...ACTGTCAAACTCACTACTGTCTTCCTTTGTTCTGCACAAGGTTGAGTTTCTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CCA 90 bp CCAAACAAAATACAGGACACCTACCACACATGCTATGGCATGTTTACACATGTATCCCGTCTAGAGTCATaGGGAGGATTTTCCCTGTCT +
Preference number: 4 (lower is better)
Translates to: PNKIQDTYHTCYGMFTHVSRLES*GGFSLS
Trigger: AGACAGGGAAAATCCTCCCCATGACTCTAGACGGGA...TACATGTGTAAACATGCCATAGCATGTGTGGTAGGTGTCCTGTATTTTGTTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CCA 90 bp GAAAGAAACTCAACCTTGTGCAGAACAAAGGAAGACAGTAGTGAGTTTGACAGTTCCCGTCTAGAGTCATaGGGAGGATTTTCCCTGTCT +
Preference number: 4 (lower is better)
Translates to: ERNSTLCRTKEDSSEFDSSRLES*GGFSLS
Trigger: AGACAGGGAAAATCCTCCCCATGACTCTAGACGGGA...ACTGTCAAACTCACTACTGTCTTCCTTTGTTCTGCACAAGGTTGAGTTTCTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CCA 90 bp GGTACAAATACCCCAGAAATGGTCTCACTTTGGGAAAGGCTCTGGAATCCTTCATCCAGCCTTTTTGTTTaGGAAACTGCCTCAGATTCA +
Preference number: 4 (lower is better)
Translates to: GTNTPEMVSLWERLWNPSSSLFV*ETASDS
Trigger: TGAATCTGAGGCAGTTTCCCAAACAAAAAGGCTGGA...TGAAGGATTCCAGAGCCTTTCCCAAAGTGAGACCATTTCTGGGGTATTTGTACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CCA 90 bp TTTTTCCCAAACAAAATACAGGACACCTACCACACATGCTATGGCATGTTTACATATGGCGTTTCATCCTaGAGCATCCTTCGCGCAGCT +
Preference number: 4 (lower is better)
Translates to: FFPNKIQDTYHTCYGMFTYGVSS*SILRAA
Trigger: AGCTGCGCGAAGGATGCTCCAGGATGAAACGCCATA...TGTAAACATGCCATAGCATGTGTGGTAGGTGTCCTGTATTTTGTTTGGGAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614628.5
CDS-3UTR TCA 90 bp GGTACAAATACCCCAGAAATGGTCTCACTTTGGGAAAGGCTCTGGAATCCTTCACTTGATCCTATACATTaGGCCAGAAGTAAAGGAAGT +
Preference number: 4 (lower is better)
Translates to: GTNTPEMVSLWERLWNPSLDPIH*ARSKGS
Trigger: ACTTCCTTTACTTCTGGCTCAATGTATAGGATCAAG...TGAAGGATTCCAGAGCCTTTCCCAAAGTGAGACCATTTCTGGGGTATTTGTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR TCA 90 bp GAAAGAAACTCAACCTTGTGCAGAACAAAGGAAGACAGTAGTGAGTTTGACAGTATTTCTAGTGACTCCTaGGGCACCTGCATGTTCCTT +
Preference number: 4 (lower is better)
Translates to: ERNSTLCRTKEDSSEFDSISSDS*GTCMFL
Trigger: AAGGAACATGCAGGTGCCTCAGGAGTCACTAGAAAT...ACTGTCAAACTCACTACTGTCTTCCTTTGTTCTGCACAAGGTTGAGTTTCTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR GCA 90 bp GGTACAAATACCCCAGAAATGGTCTCACTTTGGGAAAGGCTCTGGAATCCTTCATTTTGTTTGGGAAACTaGCTCAGATTCAAAGGTGAC +
Preference number: 4 (lower is better)
Translates to: GTNTPEMVSLWERLWNPSFCLGN*LRFKGD
Trigger: GTCACCTTTGAATCTGAGGCAGTTTCCCAAACAAAA...TGAAGGATTCCAGAGCCTTTCCCAAAGTGAGACCATTTCTGGGGTATTTGTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CCA 90 bp CCAAACAAAATACAGGACACCTACCACACATGCTATGGCATGTTTACACATGTAGTGGAGCTGTTTCTGTaGTCTTCTGGGGTTGATTTG +
Preference number: 4 (lower is better)
Translates to: PNKIQDTYHTCYGMFTHVVELFL*SSGVDL
Trigger: CAAATCAACCCCAGAAGACCACAGAAACAGCTCCAC...TACATGTGTAAACATGCCATAGCATGTGTGGTAGGTGTCCTGTATTTTGTTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CCA 90 bp TTTTTCCCAAACAAAATACAGGACACCTACCACACATGCTATGGCATGTTTACACCCAGAACTGCTCCTTaGGGCTCATATTCTTGGTTG +
Preference number: 4 (lower is better)
Translates to: FFPNKIQDTYHTCYGMFTPRTAP*GSYSWL
Trigger: CAACCAAGAATATGAGCCCCAAGGAGCAGTTCTGGG...TGTAAACATGCCATAGCATGTGTGGTAGGTGTCCTGTATTTTGTTTGGGAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CCA 90 bp TTTTTCCCAAACAAAATACAGGACACCTACCACACATGCTATGGCATGTTTACAACTGAGCAAATACCCTaGGCCCAGCTGTTCCCAATA +
Preference number: 4 (lower is better)
Translates to: FFPNKIQDTYHTCYGMFTTEQIP*AQLFPI
Trigger: TATTGGGAACAGCTGGGCCCAGGGTATTTGCTCAGT...TGTAAACATGCCATAGCATGTGTGGTAGGTGTCCTGTATTTTGTTTGGGAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CCA 90 bp CCAAACAAAATACAGGACACCTACCACACATGCTATGGCATGTTTACACATGTAGGCACCTACTACAACTaGGCTGTTTCACCAGTAAGA +
Preference number: 4 (lower is better)
Translates to: PNKIQDTYHTCYGMFTHVGTYYN*AVSPVR
Trigger: TCTTACTGGTGAAACAGCCCAGTTGTAGTAGGTGCC...TACATGTGTAAACATGCCATAGCATGTGTGGTAGGTGTCCTGTATTTTGTTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR TCA 90 bp TTTTTCCCAAACAAAATACAGGACACCTACCACACATGCTATGGCATGTTTACACTGCAAGGTCTTCATTaGGTTCCTGAAGCCAGAAGA +
Preference number: 4 (lower is better)
Translates to: FFPNKIQDTYHTCYGMFTLQGLH*VPEARR
Trigger: TCTTCTGGCTTCAGGAACTCAATGAAGACCTTGCAG...TGTAAACATGCCATAGCATGTGTGGTAGGTGTCCTGTATTTTGTTTGGGAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR TCA 90 bp TTTTTCCCAAACAAAATACAGGACACCTACCACACATGCTATGGCATGTTTACATATACTGTGAACAGATaGGCTGCTGTCAGGAGAGTG +
Preference number: 4 (lower is better)
Translates to: FFPNKIQDTYHTCYGMFTYTVNR*AAVRRV
Trigger: CACTCTCCTGACAGCAGCTCATCTGTTCACAGTATA...TGTAAACATGCCATAGCATGTGTGGTAGGTGTCCTGTATTTTGTTTGGGAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR TCA 90 bp TTTTTCCCAAACAAAATACAGGACACCTACCACACATGCTATGGCATGTTTACAATTTCTAGTGACTCCTaGGGCACCTGCATGTTCCTT +
Preference number: 4 (lower is better)
Translates to: FFPNKIQDTYHTCYGMFTISSDS*GTCMFL
Trigger: AAGGAACATGCAGGTGCCTCAGGAGTCACTAGAAAT...TGTAAACATGCCATAGCATGTGTGGTAGGTGTCCTGTATTTTGTTTGGGAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR TCA 90 bp CCAAACAAAATACAGGACACCTACCACACATGCTATGGCATGTTTACACATGTAATCACTTTCTGCCTCTaGATCACTCAGCTCCAAATC +
Preference number: 4 (lower is better)
Translates to: PNKIQDTYHTCYGMFTHVITFCL*ITQLQI
Trigger: GATTTGGAGCTGAGTGATTCAGAGGCAGAAAGTGAT...TACATGTGTAAACATGCCATAGCATGTGTGGTAGGTGTCCTGTATTTTGTTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR TCA 90 bp TTTTTCCCAAACAAAATACAGGACACCTACCACACATGCTATGGCATGTTTACACCCCAAAATATTTACTaGGCAAATACCCTGGGCCCA +
Preference number: 4 (lower is better)
Translates to: FFPNKIQDTYHTCYGMFTPQNIY*ANTLGP
Trigger: TGGGCCCAGGGTATTTGCTCAGTAAATATTTTGGGG...TGTAAACATGCCATAGCATGTGTGGTAGGTGTCCTGTATTTTGTTTGGGAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR TCA 90 bp CCAAACAAAATACAGGACACCTACCACACATGCTATGGCATGTTTACACATGTAGGAGAGGAAAACTGCTaGGTTTTCCATATTGACGGA +
Preference number: 4 (lower is better)
Translates to: PNKIQDTYHTCYGMFTHVGEENC*VFHIDG
Trigger: TCCGTCAATATGGAAAACTCAGCAGTTTTCCTCTCC...TACATGTGTAAACATGCCATAGCATGTGTGGTAGGTGTCCTGTATTTTGTTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR TCA 90 bp GAAAGAAACTCAACCTTGTGCAGAACAAAGGAAGACAGTAGTGAGTTTGACAGTGGAGAGGAAAACTGCTaGGTTTTCCATATTGACGGA +
Preference number: 4 (lower is better)
Translates to: ERNSTLCRTKEDSSEFDSGEENC*VFHIDG
Trigger: TCCGTCAATATGGAAAACTCAGCAGTTTTCCTCTCC...ACTGTCAAACTCACTACTGTCTTCCTTTGTTCTGCACAAGGTTGAGTTTCTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR GCA 90 bp CCAAACAAAATACAGGACACCTACCACACATGCTATGGCATGTTTACACATGTAATAGCGGCAAACAGATaGTGCCAACTCCATGATGTT +
Preference number: 4 (lower is better)
Translates to: PNKIQDTYHTCYGMFTHVIAANR*CQLHDV
Trigger: AACATCATGGAGTTGGCAGCATCTGTTTGCCGCTAT...TACATGTGTAAACATGCCATAGCATGTGTGGTAGGTGTCCTGTATTTTGTTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR GCA 90 bp GAAAGAAACTCAACCTTGTGCAGAACAAAGGAAGACAGTAGTGAGTTTGACAGTCTTCATCATACTCTATaGCTAGCCCTTCCTCTGTCT +
Preference number: 4 (lower is better)
Translates to: ERNSTLCRTKEDSSEFDSLHHTL*LALPLS
Trigger: AGACAGAGGAAGGGCTAGGCATAGAGTATGATGAAG...ACTGTCAAACTCACTACTGTCTTCCTTTGTTCTGCACAAGGTTGAGTTTCTTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR GCA 90 bp GAAAGAAACTCAACCTTGTGCAGAACAAAGGAAGACAGTAGTGAGTTTGACAGTCTTTCCTCTTTTGGCTaGACCAGCCCATTTTCTTCA +
Preference number: 4 (lower is better)
Translates to: ERNSTLCRTKEDSSEFDSLSSFG*TSPFSS
Trigger: TGAAGAAAATGGGCTGGTGCAGCCAAAAGAGGAAAG...ACTGTCAAACTCACTACTGTCTTCCTTTGTTCTGCACAAGGTTGAGTTTCTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR GCA 90 bp CCAAACAAAATACAGGACACCTACCACACATGCTATGGCATGTTTACACATGTAGCAAACGGTTATTCTTaGTCTCTAGTGGGTATCTCG +
Preference number: 4 (lower is better)
Translates to: PNKIQDTYHTCYGMFTHVANGYS*SLVGIS
Trigger: CGAGATACCCACTAGAGAGCAAGAATAACCGTTTGC...TACATGTGTAAACATGCCATAGCATGTGTGGTAGGTGTCCTGTATTTTGTTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR GCA 90 bp GAAAGAAACTCAACCTTGTGCAGAACAAAGGAAGACAGTAGTGAGTTTGACAGTAAAGGGGATGTGTCTTaGTTTTACCATGGCAATCCC +
Preference number: 4 (lower is better)
Translates to: ERNSTLCRTKEDSSEFDSKGDVS*FYHGNP
Trigger: GGGATTGCCATGGTAAAAGCAAGACACATCCCCTTT...ACTGTCAAACTCACTACTGTCTTCCTTTGTTCTGCACAAGGTTGAGTTTCTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CCA 90 bp TTTTTCCCAAACAAAATACAGGACACCTACCACACATGCTATGGCATGTTTACATTTTCCCATTCCCAATaGAAGACTGTCCATGGAGGG +
Preference number: 4 (lower is better)
Translates to: FFPNKIQDTYHTCYGMFTFSHSQ*KTVHGG
Trigger: CCCTCCATGGACAGTCTTCCATTGGGAATGGGAAAA...TGTAAACATGCCATAGCATGTGTGGTAGGTGTCCTGTATTTTGTTTGGGAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CCA 90 bp GAAAGAAACTCAACCTTGTGCAGAACAAAGGAAGACAGTAGTGAGTTTGACAGTTGGGGCTCATATTCTTaGTTGGCTTCACATAGCACT +
Preference number: 4 (lower is better)
Translates to: ERNSTLCRTKEDSSEFDSWGSYS*LASHST
Trigger: AGTGCTATGTGAAGCCAACCAAGAATATGAGCCCCA...ACTGTCAAACTCACTACTGTCTTCCTTTGTTCTGCACAAGGTTGAGTTTCTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CCA 90 bp GAAAGAAACTCAACCTTGTGCAGAACAAAGGAAGACAGTAGTGAGTTTGACAGTCTTTGCATTGAACTGTaGGAAAGGGGATGTGTCTTG +
Preference number: 4 (lower is better)
Translates to: ERNSTLCRTKEDSSEFDSLCIEL*ERGCVL
Trigger: CAAGACACATCCCCTTTCCCACAGTTCAATGCAAAG...ACTGTCAAACTCACTACTGTCTTCCTTTGTTCTGCACAAGGTTGAGTTTCTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CCA 90 bp GAAAGAAACTCAACCTTGTGCAGAACAAAGGAAGACAGTAGTGAGTTTGACAGTGTTTTCCCCAATATATaGGGCAAAGGCAAAGGTTGG +
Preference number: 4 (lower is better)
Translates to: ERNSTLCRTKEDSSEFDSVFPNI*GKGKGW
Trigger: CCAACCTTTGCCTTTGCCCCATATATTGGGGAAAAC...ACTGTCAAACTCACTACTGTCTTCCTTTGTTCTGCACAAGGTTGAGTTTCTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CCA 90 bp CCAAACAAAATACAGGACACCTACCACACATGCTATGGCATGTTTACACATGTATTTAGGAACAGGCACTaGACACTGATAAGCATGAGG +
Preference number: 4 (lower is better)
Translates to: PNKIQDTYHTCYGMFTHVFRNRH*TLISMR
Trigger: CCTCATGCTTATCAGTGTCCAGTGCCTGTTCCTAAA...TACATGTGTAAACATGCCATAGCATGTGTGGTAGGTGTCCTGTATTTTGTTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CCA 90 bp GAAAGAAACTCAACCTTGTGCAGAACAAAGGAAGACAGTAGTGAGTTTGACAGTCTTTGGGAAAGGCTCTaGAATCCTTCACAAATGCCT +
Preference number: 4 (lower is better)
Translates to: ERNSTLCRTKEDSSEFDSLWERL*NPSQMP
Trigger: AGGCATTTGTGAAGGATTCCAGAGCCTTTCCCAAAG...ACTGTCAAACTCACTACTGTCTTCCTTTGTTCTGCACAAGGTTGAGTTTCTTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CCA 90 bp GGTACAAATACCCCAGAAATGGTCTCACTTTGGGAAAGGCTCTGGAATCCTTCAGGACTGAGCTTATCTTaGAAAACTGGACTATATAAG +
Preference number: 4 (lower is better)
Translates to: GTNTPEMVSLWERLWNPSGLSLS*KTGLYK
Trigger: CTTATATAGTCCAGTTTTCCAAGATAAGCTCAGTCC...TGAAGGATTCCAGAGCCTTTCCCAAAGTGAGACCATTTCTGGGGTATTTGTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR TCA 90 bp GAAAGAAACTCAACCTTGTGCAGAACAAAGGAAGACAGTAGTGAGTTTGACAGTATGCTTGAGGCAATATaGCTTGAACTTCACTTCGTC +
Preference number: 4 (lower is better)
Translates to: ERNSTLCRTKEDSSEFDSMLEAI*LELHFV
Trigger: GACGAAGTGAAGTTCAAGTCATATTGCCTCAAGCAT...ACTGTCAAACTCACTACTGTCTTCCTTTGTTCTGCACAAGGTTGAGTTTCTTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR TCA 90 bp GAAAGAAACTCAACCTTGTGCAGAACAAAGGAAGACAGTAGTGAGTTTGACAGTATTCTCATTCGAGTGTaGATGCTTTCCTCTTTTGGC +
Preference number: 4 (lower is better)
Translates to: ERNSTLCRTKEDSSEFDSILIRV*MLSSFG
Trigger: GCCAAAAGAGGAAAGCATTCACACTCGAATGAGAAT...ACTGTCAAACTCACTACTGTCTTCCTTTGTTCTGCACAAGGTTGAGTTTCTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR TCA 90 bp CCAAACAAAATACAGGACACCTACCACACATGCTATGGCATGTTTACACATGTAATTCTCATTCGAGTGTaGATGCTTTCCTCTTTTGGC +
Preference number: 4 (lower is better)
Translates to: PNKIQDTYHTCYGMFTHVILIRV*MLSSFG
Trigger: GCCAAAAGAGGAAAGCATTCACACTCGAATGAGAAT...TACATGTGTAAACATGCCATAGCATGTGTGGTAGGTGTCCTGTATTTTGTTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR GCA 90 bp CCAAACAAAATACAGGACACCTACCACACATGCTATGGCATGTTTACACATGTATGCCTGTTTTGGCTATaGTTGAGGCAATATGACTTG +
Preference number: 4 (lower is better)
Translates to: PNKIQDTYHTCYGMFTHVCLFWL*LRQYDL
Trigger: CAAGTCATATTGCCTCAAGCATAGCCAAAACAGGCA...TACATGTGTAAACATGCCATAGCATGTGTGGTAGGTGTCCTGTATTTTGTTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR GCA 90 bp TTTTTCCCAAACAAAATACAGGACACCTACCACACATGCTATGGCATGTTTACACTTTCCTCTTTTGGCTaGACCAGCCCATTTTCTTCA +
Preference number: 4 (lower is better)
Translates to: FFPNKIQDTYHTCYGMFTLSSFG*TSPFSS
Trigger: TGAAGAAAATGGGCTGGTGCAGCCAAAAGAGGAAAG...TGTAAACATGCCATAGCATGTGTGGTAGGTGTCCTGTATTTTGTTTGGGAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR GCA 90 bp CCAAACAAAATACAGGACACCTACCACACATGCTATGGCATGTTTACACATGTATCATTCGAGTGTGAATaGTTTCCTCTTTTGGCTGCA +
Preference number: 4 (lower is better)
Translates to: PNKIQDTYHTCYGMFTHVSFECE*FPLLAA
Trigger: TGCAGCCAAAAGAGGAAAGCATTCACACTCGAATGA...TACATGTGTAAACATGCCATAGCATGTGTGGTAGGTGTCCTGTATTTTGTTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR GCA 90 bp GAAAGAAACTCAACCTTGTGCAGAACAAAGGAAGACAGTAGTGAGTTTGACAGTTTAAGAAGCTGGACTTaGAAACCGAAGATCTGTTCC +
Preference number: 4 (lower is better)
Translates to: ERNSTLCRTKEDSSEFDSLRSWT*KPKICS
Trigger: GGAACAGATCTTCGGTTTGCAAGTCCAGCTTCTTAA...ACTGTCAAACTCACTACTGTCTTCCTTTGTTCTGCACAAGGTTGAGTTTCTTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CCA 90 bp GAAAGAAACTCAACCTTGTGCAGAACAAAGGAAGACAGTAGTGAGTTTGACAGTTCTTGGTTAAGAAGCTaGACTTGCAAACCGAAGATC +
Preference number: 4 (lower is better)
Translates to: ERNSTLCRTKEDSSEFDSSWLRS*TCKPKI
Trigger: GATCTTCGGTTTGCAAGTCCAGCTTCTTAACCAAGA...ACTGTCAAACTCACTACTGTCTTCCTTTGTTCTGCACAAGGTTGAGTTTCTTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CCA 90 bp CCAAACAAAATACAGGACACCTACCACACATGCTATGGCATGTTTACACATGTACCTGCATCAATTTCTTaGTTAAGAAGCTGGACTTGC +
Preference number: 4 (lower is better)
Translates to: PNKIQDTYHTCYGMFTHVPASIS*LRSWTC
Trigger: GCAAGTCCAGCTTCTTAACCAAGAAATTGATGCAGG...TACATGTGTAAACATGCCATAGCATGTGTGGTAGGTGTCCTGTATTTTGTTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CCA 90 bp GAAAGAAACTCAACCTTGTGCAGAACAAAGGAAGACAGTAGTGAGTTTGACAGTACTCAGCTCCAAATCTaGGCAATAGCCATCATTTTC +
Preference number: 4 (lower is better)
Translates to: ERNSTLCRTKEDSSEFDSTQLQI*AIAIIF
Trigger: GAAAATGATGGCTATTGCCCAGATTTGGAGCTGAGT...ACTGTCAAACTCACTACTGTCTTCCTTTGTTCTGCACAAGGTTGAGTTTCTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR TCA 90 bp GAAAGAAACTCAACCTTGTGCAGAACAAAGGAAGACAGTAGTGAGTTTGACAGTTCAGGATTAATGTGGTaGGAATCTGGAAGTTTCATG +
Preference number: 4 (lower is better)
Translates to: ERNSTLCRTKEDSSEFDSSGLMW*ESGSFM
Trigger: CATGAAACTTCCAGATTCTCACCACATTAATCCTGA...ACTGTCAAACTCACTACTGTCTTCCTTTGTTCTGCACAAGGTTGAGTTTCTTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR TCA 90 bp GAAAGAAACTCAACCTTGTGCAGAACAAAGGAAGACAGTAGTGAGTTTGACAGTTGGTGGGTAAAACAGTaGGTTTTCAAGTGCATTTGT +
Preference number: 4 (lower is better)
Translates to: ERNSTLCRTKEDSSEFDSWWVKQ*VFKCIC
Trigger: ACAAATGCACTTGAAAACTCACTGTTTTACCCACCA...ACTGTCAAACTCACTACTGTCTTCCTTTGTTCTGCACAAGGTTGAGTTTCTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR TCA 90 bp GAAAGAAACTCAACCTTGTGCAGAACAAAGGAAGACAGTAGTGAGTTTGACAGTATGGCCTCTTTTGTCTaGATATTCCCACTACACTTT +
Preference number: 4 (lower is better)
Translates to: ERNSTLCRTKEDSSEFDSMASFV*IFPLHF
Trigger: AAAGTGTAGTGGGAATATTCAGACAAAAGAGGCCAT...ACTGTCAAACTCACTACTGTCTTCCTTTGTTCTGCACAAGGTTGAGTTTCTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR GCA 90 bp GAAAGAAACTCAACCTTGTGCAGAACAAAGGAAGACAGTAGTGAGTTTGACAGTTCAGCTTCTCTCGTCTaGTTATCATATAGCACAGAT +
Preference number: 4 (lower is better)
Translates to: ERNSTLCRTKEDSSEFDSSASLV*LSYSTD
Trigger: ATCTGTGCTATATGATAAGCAGACGAGAGAAGCTGA...ACTGTCAAACTCACTACTGTCTTCCTTTGTTCTGCACAAGGTTGAGTTTCTTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR GCA 90 bp TTTTTCCCAAACAAAATACAGGACACCTACCACACATGCTATGGCATGTTTACATTAAGAAGCTGGACTTaGAAACCGAAGATCTGTTCC +
Preference number: 4 (lower is better)
Translates to: FFPNKIQDTYHTCYGMFTLRSWT*KPKICS
Trigger: GGAACAGATCTTCGGTTTGCAAGTCCAGCTTCTTAA...TGTAAACATGCCATAGCATGTGTGGTAGGTGTCCTGTATTTTGTTTGGGAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR GCA 90 bp CCAAACAAAATACAGGACACCTACCACACATGCTATGGCATGTTTACACATGTAGTTTCTAATCACCTTTaGATTGAACTGTGGGAAAGG +
Preference number: 4 (lower is better)
Translates to: PNKIQDTYHTCYGMFTHVVSNHL*IELWER
Trigger: CCTTTCCCACAGTTCAATGCAAAGGTGATTAGAAAC...TACATGTGTAAACATGCCATAGCATGTGTGGTAGGTGTCCTGTATTTTGTTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR GCA 90 bp CCAAACAAAATACAGGACACCTACCACACATGCTATGGCATGTTTACACATGTATTTTGTTTGGGAAACTaGCTCAGATTCAAAGGTGAC +
Preference number: 4 (lower is better)
Translates to: PNKIQDTYHTCYGMFTHVFCLGN*LRFKGD
Trigger: GTCACCTTTGAATCTGAGGCAGTTTCCCAAACAAAA...TACATGTGTAAACATGCCATAGCATGTGTGGTAGGTGTCCTGTATTTTGTTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CCA 90 bp GAAAGAAACTCAACCTTGTGCAGAACAAAGGAAGACAGTAGTGAGTTTGACAGTAATGTGGTGAGAATCTaGAAGTTTCATGGCACTGAT +
Preference number: 4 (lower is better)
Translates to: ERNSTLCRTKEDSSEFDSNVVRI*KFHGTD
Trigger: ATCAGTGCCATGAAACTTCCAGATTCTCACCACATT...ACTGTCAAACTCACTACTGTCTTCCTTTGTTCTGCACAAGGTTGAGTTTCTTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CCA 90 bp TTTTTCCCAAACAAAATACAGGACACCTACCACACATGCTATGGCATGTTTACATCTTGGTTAAGAAGCTaGACTTGCAAACCGAAGATC +
Preference number: 4 (lower is better)
Translates to: FFPNKIQDTYHTCYGMFTSWLRS*TCKPKI
Trigger: GATCTTCGGTTTGCAAGTCCAGCTTCTTAACCAAGA...TGTAAACATGCCATAGCATGTGTGGTAGGTGTCCTGTATTTTGTTTGGGAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CCA 90 bp TTTTTCCCAAACAAAATACAGGACACCTACCACACATGCTATGGCATGTTTACACCTGCATCAATTTCTTaGTTAAGAAGCTGGACTTGC +
Preference number: 4 (lower is better)
Translates to: FFPNKIQDTYHTCYGMFTPASIS*LRSWTC
Trigger: GCAAGTCCAGCTTCTTAACCAAGAAATTGATGCAGG...TGTAAACATGCCATAGCATGTGTGGTAGGTGTCCTGTATTTTGTTTGGGAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CCA 90 bp GAAAGAAACTCAACCTTGTGCAGAACAAAGGAAGACAGTAGTGAGTTTGACAGTCTTCTGGGGTTGATTTaGGCATTTTTAACTTCAAGG +
Preference number: 4 (lower is better)
Translates to: ERNSTLCRTKEDSSEFDSLLGLI*AFLTSR
Trigger: CCTTGAAGTTAAAAATGCCCAAATCAACCCCAGAAG...ACTGTCAAACTCACTACTGTCTTCCTTTGTTCTGCACAAGGTTGAGTTTCTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CCA 90 bp GAAAGAAACTCAACCTTGTGCAGAACAAAGGAAGACAGTAGTGAGTTTGACAGTAGGTTGGGTCATCCTTaGAAGTTTCTAATCACCTTT +
Preference number: 4 (lower is better)
Translates to: ERNSTLCRTKEDSSEFDSRLGHP*KFLITF
Trigger: AAAGGTGATTAGAAACTTCCAAGGATGACCCAACCT...ACTGTCAAACTCACTACTGTCTTCCTTTGTTCTGCACAAGGTTGAGTTTCTTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CCA 90 bp TTTTTCCCAAACAAAATACAGGACACCTACCACACATGCTATGGCATGTTTACATCAAGGCTGATAGTTTaGGAACAGGGTATAAGCAAC +
Preference number: 4 (lower is better)
Translates to: FFPNKIQDTYHTCYGMFTSRLIV*EQGISN
Trigger: GTTGCTTATACCCTGTTCCCAAACTATCAGCCTTGA...TGTAAACATGCCATAGCATGTGTGGTAGGTGTCCTGTATTTTGTTTGGGAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CCA 90 bp GAAAGAAACTCAACCTTGTGCAGAACAAAGGAAGACAGTAGTGAGTTTGACAGTCTACCACACATGCTATaGCATGTTTACACATGTACA +
Preference number: 4 (lower is better)
Translates to: ERNSTLCRTKEDSSEFDSLPHML*HVYTCT
Trigger: TGTACATGTGTAAACATGCCATAGCATGTGTGGTAG...ACTGTCAAACTCACTACTGTCTTCCTTTGTTCTGCACAAGGTTGAGTTTCTTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CCA 90 bp CCAAACAAAATACAGGACACCTACCACACATGCTATGGCATGTTTACACATGTACAATGGCATTACATATaGAATTTGGCTGAAGCACTG +
Preference number: 4 (lower is better)
Translates to: PNKIQDTYHTCYGMFTHVQWHYI*NLAEAL
Trigger: CAGTGCTTCAGCCAAATTCCATATGTAATGCCATTG...TACATGTGTAAACATGCCATAGCATGTGTGGTAGGTGTCCTGTATTTTGTTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR TCA 90 bp CCAAACAAAATACAGGACACCTACCACACATGCTATGGCATGTTTACACATGTATTGGAATTTTTGACTTaGTCCTATACATTGAGCCAG +
Preference number: 4 (lower is better)
Translates to: PNKIQDTYHTCYGMFTHVLEFLT*SYTLSQ
Trigger: CTGGCTCAATGTATAGGATCAAGTCAAAAATTCCAA...TACATGTGTAAACATGCCATAGCATGTGTGGTAGGTGTCCTGTATTTTGTTTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR TCA 90 bp GAAAGAAACTCAACCTTGTGCAGAACAAAGGAAGACAGTAGTGAGTTTGACAGTCATTTGAAAAAGGACTaGGCTTATCTTGGAAAACTG +
Preference number: 4 (lower is better)
Translates to: ERNSTLCRTKEDSSEFDSHLKKD*AYLGKL
Trigger: CAGTTTTCCAAGATAAGCTCAGTCCTTTTTCAAATG...ACTGTCAAACTCACTACTGTCTTCCTTTGTTCTGCACAAGGTTGAGTTTCTTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CCA 90 bp TTTTTCCCAAACAAAATACAGGACACCTACCACACATGCTATGGCATGTTTACAAATGTGGTGAGAATCTaGAAGTTTCATGGCACTGAT +
Preference number: 4 (lower is better)
Translates to: FFPNKIQDTYHTCYGMFTNVVRI*KFHGTD
Trigger: ATCAGTGCCATGAAACTTCCAGATTCTCACCACATT...TGTAAACATGCCATAGCATGTGTGGTAGGTGTCCTGTATTTTGTTTGGGAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CCA 90 bp TTTTTCCCAAACAAAATACAGGACACCTACCACACATGCTATGGCATGTTTACACTTCTGGGGTTGATTTaGGCATTTTTAACTTCAAGG +
Preference number: 4 (lower is better)
Translates to: FFPNKIQDTYHTCYGMFTLLGLI*AFLTSR
Trigger: CCTTGAAGTTAAAAATGCCCAAATCAACCCCAGAAG...TGTAAACATGCCATAGCATGTGTGGTAGGTGTCCTGTATTTTGTTTGGGAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CCA 90 bp TTTTTCCCAAACAAAATACAGGACACCTACCACACATGCTATGGCATGTTTACACTACCACACATGCTATaGCATGTTTACACATGTACA +
Preference number: 4 (lower is better)
Translates to: FFPNKIQDTYHTCYGMFTLPHML*HVYTCT
Trigger: TGTACATGTGTAAACATGCCATAGCATGTGTGGTAG...TGTAAACATGCCATAGCATGTGTGGTAGGTGTCCTGTATTTTGTTTGGGAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CCA 90 bp GAAAGAAACTCAACCTTGTGCAGAACAAAGGAAGACAGTAGTGAGTTTGACAGTGGACTGAGCTTATCTTaGAAAACTGGACTATATAAG +
Preference number: 4 (lower is better)
Translates to: ERNSTLCRTKEDSSEFDSGLSLS*KTGLYK
Trigger: CTTATATAGTCCAGTTTTCCAAGATAAGCTCAGTCC...ACTGTCAAACTCACTACTGTCTTCCTTTGTTCTGCACAAGGTTGAGTTTCTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR TCA 90 bp TTTTTCCCAAACAAAATACAGGACACCTACCACACATGCTATGGCATGTTTACATTGGAATTTTTGACTTaGTCCTATACATTGAGCCAG +
Preference number: 4 (lower is better)
Translates to: FFPNKIQDTYHTCYGMFTLEFLT*SYTLSQ
Trigger: CTGGCTCAATGTATAGGATCAAGTCAAAAATTCCAA...TGTAAACATGCCATAGCATGTGTGGTAGGTGTCCTGTATTTTGTTTGGGAAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS CCA 90 bp CCCTCGTCCGCCCGGCCCGTCAGGCCTCAGCGCTGGGCAGGCGGTTaGGCGGCGGCGGCGGCTGAGGCGGCGCGGAGCACTATTGTATTC +
Preference number: 5 (lower is better)
Translates to: PSSARPVRPQRWAGG*AAAAAEAARSTIVF
Trigger: GAATACAATAGTGCTCCGCGCCGCCTCAGCCGCCGCCGCCGCCCAACCGCCTGCCCAGCGCTGAGGCCTGACGGGCCGGGCGGACGAGGG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614628.5
CDS GCA 90 bp GCGTTTCATCCTGGAGCATCCTTCGCGCAGCTGGCTCGCGGCTCCTaGCCGGCTCCACGCCGCGGCCCGGCAATGTGCCGGGTGAGTCCG +
Preference number: 5 (lower is better)
Translates to: AFHPGASFAQLARGS*PAPRRGPAMCRVSP
Trigger: CGGACTCACCCGGCACATTGCCGGGCCGCGGCGTGGAGCCGGGCAGGAGCCGCGAGCCAGCTGCGCGAAGGATGCTCCAGGATGAAACGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614628.5
CDS TCA 90 bp AGACTGTCCATGGAGGGCAGCCTGAAGGACCAGAGGCTTTCCCAGTaGCTGCCCATGATAGCACTCCGAGGACGGGGTTCTCCAAGCAGG +
Preference number: 5 (lower is better)
Translates to: RLSMEGSLKDQRLSQ*LPMIALRGRGSPSR
Trigger: CCTGCTTGGAGAACCCCGTCCTCGGAGTGCTATCATGGGCAGTCACTGGGAAAGCCTCTGGTCCTTCAGGCTGCCCTCCATGGACAGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS CCA 90 bp GTGGAAGGACTTTCGTCTGAACTGTCACTGCTGCTGACAGGCCTATaGCGTTTCATCCTGGAGCATCCGGAGCGGCTCCCAGCCGTCTGC +
Preference number: 5 (lower is better)
Translates to: VEGLSSELSLLLTGL*RFILEHPERLPAVC
Trigger: GCAGACGGCTGGGAGCCGCTCCGGATGCTCCAGGATGAAACGCCATAGGCCTGTCAGCAGCAGTGACAGTTCAGACGAAAGTCCTTCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424392.5
ENST00000611250.4
CDS CCA 90 bp GTGGAAGGACTTTCGTCTGAACTGTCACTGCTGCTGACAGGCCTATaGCGTTTCATCCTGGAGCATCCTTCGCGCAGCTGGCTCGCGGCT +
Preference number: 5 (lower is better)
Translates to: VEGLSSELSLLLTGL*RFILEHPSRSWLAA
Trigger: AGCCGCGAGCCAGCTGCGCGAAGGATGCTCCAGGATGAAACGCCATAGGCCTGTCAGCAGCAGTGACAGTTCAGACGAAAGTCCTTCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614628.5
CDS CCA 90 bp GTGGAAGGACTTTCGTCTGAACTGTCACTGCTGCTGACAGGCCTATaGCGTTTCATCCTGGAGCATCCTCAGCCCACACACGCTCTCGGC +
Preference number: 5 (lower is better)
Translates to: VEGLSSELSLLLTGL*RFILEHPQPTHALG
Trigger: GCCGAGAGCGTGTGTGGGCTGAGGATGCTCCAGGATGAAACGCCATAGGCCTGTCAGCAGCAGTGACAGTTCAGACGAAAGTCCTTCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455411.1
CDS-3UTR CAA 90 bp TGGGCCCAGCTGTTCCCAATAGCCTCTGACAAACCAACCTCTGGACAACCTGCAGCTGAGTTTTCCATATaGACGGAGAGAGGGCCCCTG +
Preference number: 5 (lower is better)
Translates to: WAQLFPIASDKPTSGQPAAEFSI*TERGPL
Trigger: CAGGGGCCCTCTCTCCGTCAATATGGAAAACTCAGC...TGCAGGTTGTCCAGAGGTTGGTTTGTCAGAGGCTATTGGGAACAGCTGGGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS TCA 90 bp CAGCTGCCCTCCAGGCCATTGGATTTGGCAAACTTGGAGTTAGGCTaGCTTTTCCCATTCCCAATGGAAGACTGTCCATGGAGGGCAGCC +
Preference number: 5 (lower is better)
Translates to: QLPSRPLDLANLELG*LFPFPMEDCPWRAA
Trigger: GGCTGCCCTCCATGGACAGTCTTCCATTGGGAATGGGAAAAGTCAGCCTAACTCCAAGTTTGCCAAATCCAATGGCCTGGAGGGCAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS TCA 90 bp CAGGCTCCTGGTCACAGAACATCTCACTCGAGCTGTCTTTTTGGGTaGCATTCCCAGACCAGCTGCCCTCCAGGCCATTGGATTTGGCAA +
Preference number: 5 (lower is better)
Translates to: QAPGHRTSHSSCLFG*HSQTSCPPGHWIWQ
Trigger: TTGCCAAATCCAATGGCCTGGAGGGCAGCTGGTCTGGGAATGTCACCCAAAAAGACAGCTCGAGTGAGATGTTCTGTGACCAGGAGCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS GCA 90 bp TCGTACCAAGGAATAGAACTCCTCCTCCAGCTCCCGAAGCTTCTGTaGCCGCAGGCTGGTTTTCTCACTTTTGGCCTGGCTCTGCTCTTT +
Preference number: 5 (lower is better)
Translates to: SYQGIELLLQLPKLL*PQAGFLTFGLALLF
Trigger: AAAGAGCAGAGCCAGGCCAAAAGTGAGAAAACCAGCCTGCGGGCACAGAAGCTTCGGGAGCTGGAGGAGGAGTTCTATTCCTTGGTACGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CAA 90 bp TGGGCCCAGCTGTTCCCAATAGCCTCTGACAAACCAACCTCTGGACAACCTGCACATTTAGTCCCTGTCTaGGTGGTCTTCAGGGCTCCA +
Preference number: 5 (lower is better)
Translates to: WAQLFPIASDKPTSGQPAHLVPV*VVFRAP
Trigger: TGGAGCCCTGAAGACCACCAAGACAGGGACTAAATG...TGCAGGTTGTCCAGAGGTTGGTTTGTCAGAGGCTATTGGGAACAGCTGGGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CAA 90 bp TGGGCCCAGCTGTTCCCAATAGCCTCTGACAAACCAACCTCTGGACAACCTGCAGCCCCCGTCTTCAACTaGCACAAGTTGCAGACTAAG +
Preference number: 5 (lower is better)
Translates to: WAQLFPIASDKPTSGQPAAPVFN*HKLQTK
Trigger: CTTAGTCTGCAACTTGTGCAAGTTGAAGACGGGGGC...TGCAGGTTGTCCAGAGGTTGGTTTGTCAGAGGCTATTGGGAACAGCTGGGCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS GCA 90 bp ACTCCTGAGGCACCTGCATGTTCCTTATACTGTGAACAGATGAGCTaGTGTCAGGAGAGTGGGGCTGCTGATCGGTTTCTGTGGAGCTGT +
Preference number: 5 (lower is better)
Translates to: TPEAPACSLYCEQMS*CQESGAADRFLWSC
Trigger: ACAGCTCCACAGAAACCGATCAGCAGCCCCACTCTCCTGACAGCAGCTCATCTGTTCACAGTATAAGGAACATGCAGGTGCCTCAGGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS GCA 90 bp ATAGCACTCCGAGGACGGGGTTCTCCAAGCAGGACTGGACTCCTTTaGTTCACTCCTAGAATGGCTGAGACTGGCCAGCAAACGGTTATT +
Preference number: 5 (lower is better)
Translates to: IALRGRGSPSRTGLL*FTPRMAETGQQTVI
Trigger: AATAACCGTTTGCTGGCCAGTCTCAGCCATTCTAGGAGTGAAGCAAAGGAGTCCAGTCCTGCTTGGAGAACCCCGTCCTCGGAGTGCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS GCA 90 bp CAAATCTGGGCAATAGCCATCATTTTCCTGATATGGAGCTCTCCCTaGAGACCGCCTGAGAACCTGTCTACCCCAGAACTGCTCCTTGGG +
Preference number: 5 (lower is better)
Translates to: QIWAIAIIFLIWSSP*RPPENLSTPELLLG
Trigger: CCCAAGGAGCAGTTCTGGGGTAGACAGGTTCTCAGGCGGTCTGCAGGGAGAGCTCCATATCAGGAAAATGATGGCTATTGCCCAGATTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS CCA 90 bp AACTTGCACAAGTTGCAGACTAAGGCCCACCGACTGGGTGGGATGTaGGAGATCTTCGTGATCGGTTCCATCCTCTCAGGACAAGCAATG +
Preference number: 5 (lower is better)
Translates to: NLHKLQTKAHRLGGM*EIFVIGSILSGQAM
Trigger: CATTGCTTGTCCTGAGAGGATGGAACCGATCACGAAGATCTCCCACATCCCACCCAGTCGGTGGGCCTTAGTCTGCAACTTGTGCAAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS CCA 90 bp GGGGTTCTCCAAGCAGGACTGGACTCCTTTGCTTCACTCCTAGAATaGCTGAGACTGGCCAGCAAACGGTTATTCTTGCTCTCTAGTGGG +
Preference number: 5 (lower is better)
Translates to: GVLQAGLDSFASLLE*LRLASKRLFLLSSG
Trigger: CCCACTAGAGAGCAAGAATAACCGTTTGCTGGCCAGTCTCAGCCATTCTAGGAGTGAAGCAAAGGAGTCCAGTCCTGCTTGGAGAACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CAA 90 bp TGGGCCCAGCTGTTCCCAATAGCCTCTGACAAACCAACCTCTGGACAACCTGCATCCAGGCCATTGGATTaGGCAAACTTGGAGTTAGGC +
Preference number: 5 (lower is better)
Translates to: WAQLFPIASDKPTSGQPASRPLD*ANLELG
Trigger: GCCTAACTCCAAGTTTGCCAAATCCAATGGCCTGGA...TGCAGGTTGTCCAGAGGTTGGTTTGTCAGAGGCTATTGGGAACAGCTGGGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS CCA 90 bp TGCTGCCAACTCCATGATGTTGATGTAGCCAGGCTCTGTGGTGTCTaGGCTGGAGCAGTGAATATACTTCCGGGGTCGGATAAACAGAAC +
Preference number: 5 (lower is better)
Translates to: CCQLHDVDVARLCGV*AGAVNILPGSDKQN
Trigger: GTTCTGTTTATCCGACCCCGGAAGTATATTCACTGCTCCAGCCCAGACACCACAGAGCCTGGCTACATCAACATCATGGAGTTGGCAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424392.5
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CAA 90 bp TGGGCCCAGCTGTTCCCAATAGCCTCTGACAAACCAACCTCTGGACAACCTGCACTGGTTTTCTCACTTTaGGCCTGGCTCTGCTCTTTA +
Preference number: 5 (lower is better)
Translates to: WAQLFPIASDKPTSGQPALVFSL*AWLCSL
Trigger: TAAAGAGCAGAGCCAGGCCAAAAGTGAGAAAACCAG...TGCAGGTTGTCCAGAGGTTGGTTTGTCAGAGGCTATTGGGAACAGCTGGGCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CAA 90 bp TGGGCCCAGCTGTTCCCAATAGCCTCTGACAAACCAACCTCTGGACAACCTGCAGAATGCTTTCCTCTTTaGGCTGCACCAGCCCATTTT +
Preference number: 5 (lower is better)
Translates to: WAQLFPIASDKPTSGQPAECFPL*AAPAHF
Trigger: AAAATGGGCTGGTGCAGCCAAAAGAGGAAAGCATTC...TGCAGGTTGTCCAGAGGTTGGTTTGTCAGAGGCTATTGGGAACAGCTGGGCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CAA 90 bp GAGCAAATACCCTGGGCCCAGCTGTTCCCAATAGCCTCTGACAAACCAACCTCTACTCGAGCTGTCTTTTaGGGTGACATTCCCAGACCA +
Preference number: 5 (lower is better)
Translates to: EQIPWAQLFPIASDKPTSTRAVF*GDIPRP
Trigger: TGGTCTGGGAATGTCACCCAAAAAGACAGCTCGAGT...AGAGGTTGGTTTGTCAGAGGCTATTGGGAACAGCTGGGCCCAGGGTATTTGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CAA 90 bp TGGGCCCAGCTGTTCCCAATAGCCTCTGACAAACCAACCTCTGGACAACCTGCACCCTGCATCAATTTCTaGGTTAAGAAGCTGGACTTG +
Preference number: 5 (lower is better)
Translates to: WAQLFPIASDKPTSGQPAPCINF*VKKLDL
Trigger: CAAGTCCAGCTTCTTAACCAAGAAATTGATGCAGGG...TGCAGGTTGTCCAGAGGTTGGTTTGTCAGAGGCTATTGGGAACAGCTGGGCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CAA 90 bp GAGCAAATACCCTGGGCCCAGCTGTTCCCAATAGCCTCTGACAAACCAACCTCTGGCTCATATTCTTGGTaGGCTTCACATAGCACTGGA +
Preference number: 5 (lower is better)
Translates to: EQIPWAQLFPIASDKPTSGSYSW*ASHSTG
Trigger: TCCAGTGCTATGTGAAGCCAACCAAGAATATGAGCC...AGAGGTTGGTTTGTCAGAGGCTATTGGGAACAGCTGGGCCCAGGGTATTTGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CAA 90 bp TGGGCCCAGCTGTTCCCAATAGCCTCTGACAAACCAACCTCTGGACAACCTGCACTAATCACCTTTGCATaGAACTGTGGGAAAGGGGAT +
Preference number: 5 (lower is better)
Translates to: WAQLFPIASDKPTSGQPALITFA*NCGKGD
Trigger: ATCCCCTTTCCCACAGTTCAATGCAAAGGTGATTAG...TGCAGGTTGTCCAGAGGTTGGTTTGTCAGAGGCTATTGGGAACAGCTGGGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS TCA 90 bp AAGGACCTACTAAAGTGTTCTACAGTGGATTTTCTAAAGCTGCCCTaGCTGACCAAGTGGGGGCTGAACACAGGCTCCTGGTCACAGAAC +
Preference number: 5 (lower is better)
Translates to: KDLLKCSTVDFLKLP*LTKWGLNTGSWSQN
Trigger: GTTCTGTGACCAGGAGCCTGTGTTCAGCCCCCACTTGGTCAGTCAGGGCAGCTTTAGAAAATCCACTGTAGAACACTTTAGTAGGTCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CAA 90 bp TGGGCCCAGCTGTTCCCAATAGCCTCTGACAAACCAACCTCTGGACAACCTGCAAAGTTTCTGCCTGTTTaGGCTATGCTTGAGGCAATA +
Preference number: 5 (lower is better)
Translates to: WAQLFPIASDKPTSGQPAKFLPV*AMLEAI
Trigger: TATTGCCTCAAGCATAGCCAAAACAGGCAGAAACTT...TGCAGGTTGTCCAGAGGTTGGTTTGTCAGAGGCTATTGGGAACAGCTGGGCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CAA 90 bp GAGCAAATACCCTGGGCCCAGCTGTTCCCAATAGCCTCTGACAAACCAACCTCTGTTAAGAAGCTGGACTaGCAAACCGAAGATCTGTTC +
Preference number: 5 (lower is better)
Translates to: EQIPWAQLFPIASDKPTSVKKLD*QTEDLF
Trigger: GAACAGATCTTCGGTTTGCAAGTCCAGCTTCTTAAC...AGAGGTTGGTTTGTCAGAGGCTATTGGGAACAGCTGGGCCCAGGGTATTTGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CAA 90 bp GAGCAAATACCCTGGGCCCAGCTGTTCCCAATAGCCTCTGACAAACCAACCTCTAGCAAACGGTTATTCTaGCTCTCTAGTGGGTATCTC +
Preference number: 5 (lower is better)
Translates to: EQIPWAQLFPIASDKPTSSKRLF*LSSGYL
Trigger: GAGATACCCACTAGAGAGCAAGAATAACCGTTTGCT...AGAGGTTGGTTTGTCAGAGGCTATTGGGAACAGCTGGGCCCAGGGTATTTGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CAA 90 bp GAGCAAATACCCTGGGCCCAGCTGTTCCCAATAGCCTCTGACAAACCAACCTCTCTAATCACCTTTGCATaGAACTGTGGGAAAGGGGAT +
Preference number: 5 (lower is better)
Translates to: EQIPWAQLFPIASDKPTSLITFA*NCGKGD
Trigger: ATCCCCTTTCCCACAGTTCAATGCAAAGGTGATTAG...AGAGGTTGGTTTGTCAGAGGCTATTGGGAACAGCTGGGCCCAGGGTATTTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CAA 90 bp GAGCAAATACCCTGGGCCCAGCTGTTCCCAATAGCCTCTGACAAACCAACCTCTATCTGTTCCTGTATTTaGTTGTGTGACAGCTTCAGC +
Preference number: 5 (lower is better)
Translates to: EQIPWAQLFPIASDKPTSICSCI*LCDSFS
Trigger: GCTGAAGCTGTCACACAACAAAATACAGGAACAGAT...AGAGGTTGGTTTGTCAGAGGCTATTGGGAACAGCTGGGCCCAGGGTATTTGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CAA 90 bp GAGCAAATACCCTGGGCCCAGCTGTTCCCAATAGCCTCTGACAAACCAACCTCTAGTTTTCAAGTGCATTaGTCAAAGGAAGCCCTGCAT +
Preference number: 5 (lower is better)
Translates to: EQIPWAQLFPIASDKPTSSFQVH*SKEALH
Trigger: ATGCAGGGCTTCCTTTGACAAATGCACTTGAAAACT...AGAGGTTGGTTTGTCAGAGGCTATTGGGAACAGCTGGGCCCAGGGTATTTGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CAA 90 bp TGGGCCCAGCTGTTCCCAATAGCCTCTGACAAACCAACCTCTGGACAACCTGCATCTTCTGGGGTTGATTaGGGCATTTTTAACTTCAAG +
Preference number: 5 (lower is better)
Translates to: WAQLFPIASDKPTSGQPASSGVD*GIFNFK
Trigger: CTTGAAGTTAAAAATGCCCAAATCAACCCCAGAAGA...TGCAGGTTGTCCAGAGGTTGGTTTGTCAGAGGCTATTGGGAACAGCTGGGCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CAA 90 bp GAGCAAATACCCTGGGCCCAGCTGTTCCCAATAGCCTCTGACAAACCAACCTCTGAAAGAAACTCAACCTaGTGCAGAACAAAGGAAGAC +
Preference number: 5 (lower is better)
Translates to: EQIPWAQLFPIASDKPTSERNST*CRTKED
Trigger: GTCTTCCTTTGTTCTGCACAAGGTTGAGTTTCTTTC...AGAGGTTGGTTTGTCAGAGGCTATTGGGAACAGCTGGGCCCAGGGTATTTGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CAA 90 bp GAGCAAATACCCTGGGCCCAGCTGTTCCCAATAGCCTCTGACAAACCAACCTCTGGAAAATGGCCTCTTTaGTCTGAATATTCCCACTAC +
Preference number: 5 (lower is better)
Translates to: EQIPWAQLFPIASDKPTSGKWPL*SEYSHY
Trigger: GTAGTGGGAATATTCAGACAAAAGAGGCCATTTTCC...AGAGGTTGGTTTGTCAGAGGCTATTGGGAACAGCTGGGCCCAGGGTATTTGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS GCA 90 bp TGGTGGGGGTACTCAGCTTCTCCAAGTTTCTGCCTGTTTTGGCTATaGTTGAGGCAATATGACTTGAACTTCACTTCGTCTCCCTCATCT +
Preference number: 5 (lower is better)
Translates to: WWGYSASPSFCLFWL*LRQYDLNFTSSPSS
Trigger: AGATGAGGGAGACGAAGTGAAGTTCAAGTCATATTGCCTCAAGCATAGCCAAAACAGGCAGAAACTTGGAGAAGCTGAGTACCCCCACCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS GCA 90 bp TCTGTTCCTGTATTTTGTTGTGTGACAGCTTCAGCTTCTCTCGTCTaGTTATCATATAGCACAGATTTCGGACCCTCTCCAGGTCCTGGC +
Preference number: 5 (lower is better)
Translates to: SVPVFCCVTASASLV*LSYSTDFGPSPGPG
Trigger: GCCAGGACCTGGAGAGGGTCCGAAATCTGTGCTATATGATAAGCAGACGAGAGAAGCTGAAGCTGTCACACAACAAAATACAGGAACAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CAA 90 bp TGGGCCCAGCTGTTCCCAATAGCCTCTGACAAACCAACCTCTGGACAACCTGCAACCTCAGCAGGTTTCTaGTGTTCATTTGGAATTTTT +
Preference number: 5 (lower is better)
Translates to: WAQLFPIASDKPTSGQPATSAGF*CSFGIF
Trigger: AAAAATTCCAAATGAACACAAGAAACCTGCTGAGGT...TGCAGGTTGTCCAGAGGTTGGTTTGTCAGAGGCTATTGGGAACAGCTGGGCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CAA 90 bp GGTACAAATACCCCAGAAATGGTCTCACTTTGGGAAAGGCTCTGGAATCCTTCAACTCGAGCTGTCTTTTaGGGTGACATTCCCAGACCA +
Preference number: 5 (lower is better)
Translates to: GTNTPEMVSLWERLWNPSTRAVF*GDIPRP
Trigger: TGGTCTGGGAATGTCACCCAAAAAGACAGCTCGAGT...TGAAGGATTCCAGAGCCTTTCCCAAAGTGAGACCATTTCTGGGGTATTTGTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CAA 90 bp GAGCAAATACCCTGGGCCCAGCTGTTCCCAATAGCCTCTGACAAACCAACCTCTACCTCAGCAGGTTTCTaGTGTTCATTTGGAATTTTT +
Preference number: 5 (lower is better)
Translates to: EQIPWAQLFPIASDKPTSTSAGF*CSFGIF
Trigger: AAAAATTCCAAATGAACACAAGAAACCTGCTGAGGT...AGAGGTTGGTTTGTCAGAGGCTATTGGGAACAGCTGGGCCCAGGGTATTTGCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CAA 90 bp GAGCAAATACCCTGGGCCCAGCTGTTCCCAATAGCCTCTGACAAACCAACCTCTTTTCTTCATCCTCCTTaGGAGGAAATAATGGCTTAT +
Preference number: 5 (lower is better)
Translates to: EQIPWAQLFPIASDKPTSFLHPP*EEIMAY
Trigger: ATAAGCCATTATTTCCTCCAAAGGAGGATGAAGAAA...AGAGGTTGGTTTGTCAGAGGCTATTGGGAACAGCTGGGCCCAGGGTATTTGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CAA 90 bp GGTACAAATACCCCAGAAATGGTCTCACTTTGGGAAAGGCTCTGGAATCCTTCAGAATGCTTTCCTCTTTaGGCTGCACCAGCCCATTTT +
Preference number: 5 (lower is better)
Translates to: GTNTPEMVSLWERLWNPSECFPL*AAPAHF
Trigger: AAAATGGGCTGGTGCAGCCAAAAGAGGAAAGCATTC...TGAAGGATTCCAGAGCCTTTCCCAAAGTGAGACCATTTCTGGGGTATTTGTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CAA 90 bp GAGCAAATACCCTGGGCCCAGCTGTTCCCAATAGCCTCTGACAAACCAACCTCTATCTCGGATACGATTTaGTTCTCATTTCTAGTGACT +
Preference number: 5 (lower is better)
Translates to: EQIPWAQLFPIASDKPTSISDTI*FSFLVT
Trigger: AGTCACTAGAAATGAGAACAAAATCGTATCCGAGAT...AGAGGTTGGTTTGTCAGAGGCTATTGGGAACAGCTGGGCCCAGGGTATTTGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CAA 90 bp CCAAACAAAATACAGGACACCTACCACACATGCTATGGCATGTTTACACATGTACTGCCCTCCAGGCCATaGGATTTGGCAAACTTGGAG +
Preference number: 5 (lower is better)
Translates to: PNKIQDTYHTCYGMFTHVLPSRP*DLANLE
Trigger: CTCCAAGTTTGCCAAATCCAATGGCCTGGAGGGCAG...TACATGTGTAAACATGCCATAGCATGTGTGGTAGGTGTCCTGTATTTTGTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CAA 90 bp GAAAGAAACTCAACCTTGTGCAGAACAAAGGAAGACAGTAGTGAGTTTGACAGTCTGCCCTCCAGGCCATaGGATTTGGCAAACTTGGAG +
Preference number: 5 (lower is better)
Translates to: ERNSTLCRTKEDSSEFDSLPSRP*DLANLE
Trigger: CTCCAAGTTTGCCAAATCCAATGGCCTGGAGGGCAG...ACTGTCAAACTCACTACTGTCTTCCTTTGTTCTGCACAAGGTTGAGTTTCTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CAA 90 bp GGTACAAATACCCCAGAAATGGTCTCACTTTGGGAAAGGCTCTGGAATCCTTCAGGCTCATATTCTTGGTaGGCTTCACATAGCACTGGA +
Preference number: 5 (lower is better)
Translates to: GTNTPEMVSLWERLWNPSGSYSW*ASHSTG
Trigger: TCCAGTGCTATGTGAAGCCAACCAAGAATATGAGCC...TGAAGGATTCCAGAGCCTTTCCCAAAGTGAGACCATTTCTGGGGTATTTGTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS CCA 90 bp GTTGGGTCATCCTTGGAAGTTTCTAATCACCTTTGCATTGAACTGTaGGAAAGGGGATGTGTCTTGCTTTTACCATGGCAATCCCGTCTA +
Preference number: 5 (lower is better)
Translates to: VGSSLEVSNHLCIEL*ERGCVLLLPWQSRL
Trigger: TAGACGGGATTGCCATGGTAAAAGCAAGACACATCCCCTTTCCCACAGTTCAATGCAAAGGTGATTAGAAACTTCCAAGGATGACCCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CAA 90 bp CCAAACAAAATACAGGACACCTACCACACATGCTATGGCATGTTTACACATGTACATTTAGTCCCTGTCTaGGTGGTCTTCAGGGCTCCA +
Preference number: 5 (lower is better)
Translates to: PNKIQDTYHTCYGMFTHVHLVPV*VVFRAP
Trigger: TGGAGCCCTGAAGACCACCAAGACAGGGACTAAATG...TACATGTGTAAACATGCCATAGCATGTGTGGTAGGTGTCCTGTATTTTGTTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CAA 90 bp GGTACAAATACCCCAGAAATGGTCTCACTTTGGGAAAGGCTCTGGAATCCTTCATTCTTCACCCACCTATaGGTGGTCTCTTTAAAGGAC +
Preference number: 5 (lower is better)
Translates to: GTNTPEMVSLWERLWNPSFFTHL*VVSLKD
Trigger: GTCCTTTAAAGAGACCACCAATAGGTGGGTGAAGAA...TGAAGGATTCCAGAGCCTTTCCCAAAGTGAGACCATTTCTGGGGTATTTGTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CAA 90 bp TTTTTCCCAAACAAAATACAGGACACCTACCACACATGCTATGGCATGTTTACAGCTGAGTTTTCCATATaGACGGAGAGAGGGCCCCTG +
Preference number: 5 (lower is better)
Translates to: FFPNKIQDTYHTCYGMFTAEFSI*TERGPL
Trigger: CAGGGGCCCTCTCTCCGTCAATATGGAAAACTCAGC...TGTAAACATGCCATAGCATGTGTGGTAGGTGTCCTGTATTTTGTTTGGGAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS CCA 90 bp ATCAGCAAAGAGGTAATAGCTATCAGGATTAATGTGGTGAGAATCTaGAAGTTTCATGGCACTGATGAGGTCCTTCCGGAATACCTCAGC +
Preference number: 5 (lower is better)
Translates to: ISKEVIAIRINVVRI*KFHGTDEVLPEYLS
Trigger: GCTGAGGTATTCCGGAAGGACCTCATCAGTGCCATGAAACTTCCAGATTCTCACCACATTAATCCTGATAGCTATTACCTCTTTGCTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424392.5
ENST00000455411.1
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CAA 90 bp CCAAACAAAATACAGGACACCTACCACACATGCTATGGCATGTTTACACATGTATTCAACTTGCACAAGTaGCAGACTAAGGCCCACCGA +
Preference number: 5 (lower is better)
Translates to: PNKIQDTYHTCYGMFTHVFNLHK*QTKAHR
Trigger: TCGGTGGGCCTTAGTCTGCAACTTGTGCAAGTTGAA...TACATGTGTAAACATGCCATAGCATGTGTGGTAGGTGTCCTGTATTTTGTTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CAA 90 bp GAAAGAAACTCAACCTTGTGCAGAACAAAGGAAGACAGTAGTGAGTTTGACAGTTTCAACTTGCACAAGTaGCAGACTAAGGCCCACCGA +
Preference number: 5 (lower is better)
Translates to: ERNSTLCRTKEDSSEFDSFNLHK*QTKAHR
Trigger: TCGGTGGGCCTTAGTCTGCAACTTGTGCAAGTTGAA...ACTGTCAAACTCACTACTGTCTTCCTTTGTTCTGCACAAGGTTGAGTTTCTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CAA 90 bp TTTTTCCCAAACAAAATACAGGACACCTACCACACATGCTATGGCATGTTTACAGCCCCCGTCTTCAACTaGCACAAGTTGCAGACTAAG +
Preference number: 5 (lower is better)
Translates to: FFPNKIQDTYHTCYGMFTAPVFN*HKLQTK
Trigger: CTTAGTCTGCAACTTGTGCAAGTTGAAGACGGGGGC...TGTAAACATGCCATAGCATGTGTGGTAGGTGTCCTGTATTTTGTTTGGGAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CAA 90 bp GAAAGAAACTCAACCTTGTGCAGAACAAAGGAAGACAGTAGTGAGTTTGACAGTTCCAGGCCATTGGATTaGGCAAACTTGGAGTTAGGC +
Preference number: 5 (lower is better)
Translates to: ERNSTLCRTKEDSSEFDSSRPLD*ANLELG
Trigger: GCCTAACTCCAAGTTTGCCAAATCCAATGGCCTGGA...ACTGTCAAACTCACTACTGTCTTCCTTTGTTCTGCACAAGGTTGAGTTTCTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CAA 90 bp GGTACAAATACCCCAGAAATGGTCTCACTTTGGGAAAGGCTCTGGAATCCTTCAGAAAGAAACTCAACCTaGTGCAGAACAAAGGAAGAC +
Preference number: 5 (lower is better)
Translates to: GTNTPEMVSLWERLWNPSERNST*CRTKED
Trigger: GTCTTCCTTTGTTCTGCACAAGGTTGAGTTTCTTTC...TGAAGGATTCCAGAGCCTTTCCCAAAGTGAGACCATTTCTGGGGTATTTGTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS GCA 90 bp GTCAAAGGAAGCCCTGCATCAATTTCTTGGTTAAGAAGCTGGACTTaGAAACCGAAGATCTGTTCCTGTATTTTGTTGTGTGACAGCTTC +
Preference number: 5 (lower is better)
Translates to: VKGSPASISWLRSWT*KPKICSCILLCDSF
Trigger: GAAGCTGTCACACAACAAAATACAGGAACAGATCTTCGGTTTGCAAGTCCAGCTTCTTAACCAAGAAATTGATGCAGGGCTTCCTTTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CAA 90 bp TTTTTCCCAAACAAAATACAGGACACCTACCACACATGCTATGGCATGTTTACAGGGCTCCACCTTTCTTaGGACATAACACACATTGCG +
Preference number: 5 (lower is better)
Translates to: FFPNKIQDTYHTCYGMFTGLHLS*DITHIA
Trigger: CGCAATGTGTGTTATGTCCAAAGAAAGGTGGAGCCC...TGTAAACATGCCATAGCATGTGTGGTAGGTGTCCTGTATTTTGTTTGGGAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CAA 90 bp CCAAACAAAATACAGGACACCTACCACACATGCTATGGCATGTTTACACATGTAGAAAGGGGATGTGTCTaGCTTTTACCATGGCAATCC +
Preference number: 5 (lower is better)
Translates to: PNKIQDTYHTCYGMFTHVERGCV*LLPWQS
Trigger: GGATTGCCATGGTAAAAGCAAGACACATCCCCTTTC...TACATGTGTAAACATGCCATAGCATGTGTGGTAGGTGTCCTGTATTTTGTTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CAA 90 bp GAAAGAAACTCAACCTTGTGCAGAACAAAGGAAGACAGTAGTGAGTTTGACAGTGAAAGGGGATGTGTCTaGCTTTTACCATGGCAATCC +
Preference number: 5 (lower is better)
Translates to: ERNSTLCRTKEDSSEFDSERGCV*LLPWQS
Trigger: GGATTGCCATGGTAAAAGCAAGACACATCCCCTTTC...ACTGTCAAACTCACTACTGTCTTCCTTTGTTCTGCACAAGGTTGAGTTTCTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CAA 90 bp CCAAACAAAATACAGGACACCTACCACACATGCTATGGCATGTTTACACATGTAAGAAATGGTCTCACTTaGGGAAAGGCTCTGGAATCC +
Preference number: 5 (lower is better)
Translates to: PNKIQDTYHTCYGMFTHVRNGLT*GKALES
Trigger: GGATTCCAGAGCCTTTCCCAAAGTGAGACCATTTCT...TACATGTGTAAACATGCCATAGCATGTGTGGTAGGTGTCCTGTATTTTGTTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS CCA 90 bp GCATTTGTCAAAGGAAGCCCTGCATCAATTTCTTGGTTAAGAAGCTaGACTTGCAAACCGAAGATCTGTTCCTGTATTTTGTTGTGTGAC +
Preference number: 5 (lower is better)
Translates to: AFVKGSPASISWLRS*TCKPKICSCILLCD
Trigger: GTCACACAACAAAATACAGGAACAGATCTTCGGTTTGCAAGTCCAGCTTCTTAACCAAGAAATTGATGCAGGGCTTCCTTTGACAAATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CAA 90 bp GAAAGAAACTCAACCTTGTGCAGAACAAAGGAAGACAGTAGTGAGTTTGACAGTTTGAGGCAATATGACTaGAACTTCACTTCGTCTCCC +
Preference number: 5 (lower is better)
Translates to: ERNSTLCRTKEDSSEFDSLRQYD*NFTSSP
Trigger: GGGAGACGAAGTGAAGTTCAAGTCATATTGCCTCAA...ACTGTCAAACTCACTACTGTCTTCCTTTGTTCTGCACAAGGTTGAGTTTCTTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CAA 90 bp CCAAACAAAATACAGGACACCTACCACACATGCTATGGCATGTTTACACATGTAAGCAAACGGTTATTCTaGCTCTCTAGTGGGTATCTC +
Preference number: 5 (lower is better)
Translates to: PNKIQDTYHTCYGMFTHVSKRLF*LSSGYL
Trigger: GAGATACCCACTAGAGAGCAAGAATAACCGTTTGCT...TACATGTGTAAACATGCCATAGCATGTGTGGTAGGTGTCCTGTATTTTGTTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CAA 90 bp CCAAACAAAATACAGGACACCTACCACACATGCTATGGCATGTTTACACATGTACTGTTTTGGCTATGCTaGAGGCAATATGACTTGAAC +
Preference number: 5 (lower is better)
Translates to: PNKIQDTYHTCYGMFTHVLFWLC*RQYDLN
Trigger: GTTCAAGTCATATTGCCTCAAGCATAGCCAAAACAG...TACATGTGTAAACATGCCATAGCATGTGTGGTAGGTGTCCTGTATTTTGTTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CAA 90 bp TTTTTCCCAAACAAAATACAGGACACCTACCACACATGCTATGGCATGTTTACAGTTAAGAAGCTGGACTaGCAAACCGAAGATCTGTTC +
Preference number: 5 (lower is better)
Translates to: FFPNKIQDTYHTCYGMFTVKKLD*QTEDLF
Trigger: GAACAGATCTTCGGTTTGCAAGTCCAGCTTCTTAAC...TGTAAACATGCCATAGCATGTGTGGTAGGTGTCCTGTATTTTGTTTGGGAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CAA 90 bp TTTTTCCCAAACAAAATACAGGACACCTACCACACATGCTATGGCATGTTTACATTCTTCACCCACCTATaGGTGGTCTCTTTAAAGGAC +
Preference number: 5 (lower is better)
Translates to: FFPNKIQDTYHTCYGMFTFFTHL*VVSLKD
Trigger: GTCCTTTAAAGAGACCACCAATAGGTGGGTGAAGAA...TGTAAACATGCCATAGCATGTGTGGTAGGTGTCCTGTATTTTGTTTGGGAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CAA 90 bp CCAAACAAAATACAGGACACCTACCACACATGCTATGGCATGTTTACACATGTAAAGGTTGGGTCATCCTaGGAAGTTTCTAATCACCTT +
Preference number: 5 (lower is better)
Translates to: PNKIQDTYHTCYGMFTHVKVGSS*EVSNHL
Trigger: AAGGTGATTAGAAACTTCCAAGGATGACCCAACCTT...TACATGTGTAAACATGCCATAGCATGTGTGGTAGGTGTCCTGTATTTTGTTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CAA 90 bp GAAAGAAACTCAACCTTGTGCAGAACAAAGGAAGACAGTAGTGAGTTTGACAGTATCAAGGCTGATAGTTaGGGAACAGGGTATAAGCAA +
Preference number: 5 (lower is better)
Translates to: ERNSTLCRTKEDSSEFDSIKADS*GTGYKQ
Trigger: TTGCTTATACCCTGTTCCCAAACTATCAGCCTTGAT...ACTGTCAAACTCACTACTGTCTTCCTTTGTTCTGCACAAGGTTGAGTTTCTTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CAA 90 bp CCAAACAAAATACAGGACACCTACCACACATGCTATGGCATGTTTACACATGTAATCAAGGCTGATAGTTaGGGAACAGGGTATAAGCAA +
Preference number: 5 (lower is better)
Translates to: PNKIQDTYHTCYGMFTHVIKADS*GTGYKQ
Trigger: TTGCTTATACCCTGTTCCCAAACTATCAGCCTTGAT...TACATGTGTAAACATGCCATAGCATGTGTGGTAGGTGTCCTGTATTTTGTTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CAA 90 bp TTTTTCCCAAACAAAATACAGGACACCTACCACACATGCTATGGCATGTTTACACTGTTTTGGCTATGCTaGAGGCAATATGACTTGAAC +
Preference number: 5 (lower is better)
Translates to: FFPNKIQDTYHTCYGMFTLFWLC*RQYDLN
Trigger: GTTCAAGTCATATTGCCTCAAGCATAGCCAAAACAG...TGTAAACATGCCATAGCATGTGTGGTAGGTGTCCTGTATTTTGTTTGGGAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CAA 90 bp TTTTTCCCAAACAAAATACAGGACACCTACCACACATGCTATGGCATGTTTACAAAGTTTCTGCCTGTTTaGGCTATGCTTGAGGCAATA +
Preference number: 5 (lower is better)
Translates to: FFPNKIQDTYHTCYGMFTKFLPV*AMLEAI
Trigger: TATTGCCTCAAGCATAGCCAAAACAGGCAGAAACTT...TGTAAACATGCCATAGCATGTGTGGTAGGTGTCCTGTATTTTGTTTGGGAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CAA 90 bp TTTTTCCCAAACAAAATACAGGACACCTACCACACATGCTATGGCATGTTTACAAGTTTTCAAGTGCATTaGTCAAAGGAAGCCCTGCAT +
Preference number: 5 (lower is better)
Translates to: FFPNKIQDTYHTCYGMFTSFQVH*SKEALH
Trigger: ATGCAGGGCTTCCTTTGACAAATGCACTTGAAAACT...TGTAAACATGCCATAGCATGTGTGGTAGGTGTCCTGTATTTTGTTTGGGAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CAA 90 bp TTTTTCCCAAACAAAATACAGGACACCTACCACACATGCTATGGCATGTTTACAAAGGTTGGGTCATCCTaGGAAGTTTCTAATCACCTT +
Preference number: 5 (lower is better)
Translates to: FFPNKIQDTYHTCYGMFTKVGSS*EVSNHL
Trigger: AAGGTGATTAGAAACTTCCAAGGATGACCCAACCTT...TGTAAACATGCCATAGCATGTGTGGTAGGTGTCCTGTATTTTGTTTGGGAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CAA 90 bp GAAAGAAACTCAACCTTGTGCAGAACAAAGGAAGACAGTAGTGAGTTTGACAGTAAGACAGTAGTGAGTTaGACAGTATCTAAGATGGTG +
Preference number: 5 (lower is better)
Translates to: ERNSTLCRTKEDSSEFDSKTVVS*TVSKMV
Trigger: CACCATCTTAGATACTGTCAAACTCACTACTGTCTT...ACTGTCAAACTCACTACTGTCTTCCTTTGTTCTGCACAAGGTTGAGTTTCTTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CAA 90 bp TTTTTCCCAAACAAAATACAGGACACCTACCACACATGCTATGGCATGTTTACAGGAAAATGGCCTCTTTaGTCTGAATATTCCCACTAC +
Preference number: 5 (lower is better)
Translates to: FFPNKIQDTYHTCYGMFTGKWPL*SEYSHY
Trigger: GTAGTGGGAATATTCAGACAAAAGAGGCCATTTTCC...TGTAAACATGCCATAGCATGTGTGGTAGGTGTCCTGTATTTTGTTTGGGAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CAA 90 bp TTTTTCCCAAACAAAATACAGGACACCTACCACACATGCTATGGCATGTTTACATCTTCTGGGGTTGATTaGGGCATTTTTAACTTCAAG +
Preference number: 5 (lower is better)
Translates to: FFPNKIQDTYHTCYGMFTSSGVD*GIFNFK
Trigger: CTTGAAGTTAAAAATGCCCAAATCAACCCCAGAAGA...TGTAAACATGCCATAGCATGTGTGGTAGGTGTCCTGTATTTTGTTTGGGAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CAA 90 bp TTTTTCCCAAACAAAATACAGGACACCTACCACACATGCTATGGCATGTTTACATTTCTTCATCCTCCTTaGGAGGAAATAATGGCTTAT +
Preference number: 5 (lower is better)
Translates to: FFPNKIQDTYHTCYGMFTFLHPP*EEIMAY
Trigger: ATAAGCCATTATTTCCTCCAAAGGAGGATGAAGAAA...TGTAAACATGCCATAGCATGTGTGGTAGGTGTCCTGTATTTTGTTTGGGAAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CAA 90 bp TTTTTCCCAAACAAAATACAGGACACCTACCACACATGCTATGGCATGTTTACAATCTCGGATACGATTTaGTTCTCATTTCTAGTGACT +
Preference number: 5 (lower is better)
Translates to: FFPNKIQDTYHTCYGMFTISDTI*FSFLVT
Trigger: AGTCACTAGAAATGAGAACAAAATCGTATCCGAGAT...TGTAAACATGCCATAGCATGTGTGGTAGGTGTCCTGTATTTTGTTTGGGAAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS-3UTR CAA 90 bp TTTTTCCCAAACAAAATACAGGACACCTACCACACATGCTATGGCATGTTTACAATCAGAGCATTTTCCTaGGAAGTAGTACTTTTGTAC +
Preference number: 5 (lower is better)
Translates to: FFPNKIQDTYHTCYGMFTIRAFS*EVVLLY
Trigger: GTACAAAAGTACTACTTCCAAGGAAAATGCTCTGAT...TGTAAACATGCCATAGCATGTGTGGTAGGTGTCCTGTATTTTGTTTGGGAAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS GCA 72 bp GGCTCCTGCCCGGCTCCACGCCGCGGCCCGGCAATGTaGCGGGTGAGTCCGGTCGGAGTGGTAACCGCCCCC +
Preference number: 6 (lower is better)
Translates to: GSCPAPRRGPAM*RVSPVGVVTAP
Trigger: GGGGGCGGTTACCACTCCGACCGGACTCACCCGGCACATTGCCGGGCCGCGGCGTGGAGCCGGGCAGGAGCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614628.5
CDS GCA 72 bp CCTGGAGCATCCTTCGCGCAGCTGGCTCGCGGCTCCTaGCCGGCTCCACGCCGCGGCCCGGCAATGTGCCGG +
Preference number: 6 (lower is better)
Translates to: PGASFAQLARGS*PAPRRGPAMCR
Trigger: CCGGCACATTGCCGGGCCGCGGCGTGGAGCCGGGCAGGAGCCGCGAGCCAGCTGCGCGAAGGATGCTCCAGG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614628.5
CDS GCA 72 bp TTCATCCTGGAGCATCCGGAGCGGCTCCCAGCCGTCTaGCCGCCGCGCGTTCTTCTGGCGGGCTGGGCGCCG +
Preference number: 6 (lower is better)
Translates to: FILEHPERLPAV*PPRVLLAGWAP
Trigger: CGGCGCCCAGCCCGCCAGAAGAACGCGCGGCGGGCAGACGGCTGGGAGCCGCTCCGGATGCTCCAGGATGAA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424392.5
ENST00000611250.4
CDS TCA 72 bp TCAGCGCTGGGCAGGCGGTTGGGCGGCGGCGGCGGCTaGGGCGGCGCGGAGCACTATTGTATTCCTGACACT +
Preference number: 6 (lower is better)
Translates to: SALGRRLGGGGG*GGAEHYCIPDT
Trigger: AGTGTCAGGAATACAATAGTGCTCCGCGCCGCCTCAGCCGCCGCCGCCGCCCAACCGCCTGCCCAGCGCTGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614628.5
CDS TCA 72 bp ATGGAGGGCAGCCTGAAGGACCAGAGGCTTTCCCAGTaGCTGCCCATGATAGCACTCCGAGGACGGGGTTCT +
Preference number: 6 (lower is better)
Translates to: MEGSLKDQRLSQ*LPMIALRGRGS
Trigger: AGAACCCCGTCCTCGGAGTGCTATCATGGGCAGTCACTGGGAAAGCCTCTGGTCCTTCAGGCTGCCCTCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS CAA 72 bp CGAAGCTTCTGTGCCCGCAGGCTGGTTTTCTCACTTTaGGCCTGGCTCTGCTCTTTAGCCCTGTGGTGGGGG +
Preference number: 6 (lower is better)
Translates to: RSFCARRLVFSL*AWLCSLALWWG
Trigger: CCCCCACCACAGGGCTAAAGAGCAGAGCCAGGCCAAAAGTGAGAAAACCAGCCTGCGGGCACAGAAGCTTCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS CAA 90 bp TCCAGCTCCCGAAGCTTCTGTGCCCGCAGGCTGGTTTTCTCACTTTaGGCCTGGCTCTGCTCTTTAGCCCTGTGGTGGGGGTACTCAGCT +
Preference number: 6 (lower is better)
Translates to: SSSRSFCARRLVFSL*AWLCSLALWWGYSA
Trigger: AGCTGAGTACCCCCACCACAGGGCTAAAGAGCAGAGCCAGGCCAAAAGTGAGAAAACCAGCCTGCGGGCACAGAAGCTTCGGGAGCTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS CCA 72 bp CTTTCGTCTGAACTGTCACTGCTGCTGACAGGCCTATaGCGTTTCATCCTGGAGCATCCGGAGCGGCTCCCA +
Preference number: 6 (lower is better)
Translates to: LSSELSLLLTGL*RFILEHPERLP
Trigger: TGGGAGCCGCTCCGGATGCTCCAGGATGAAACGCCATAGGCCTGTCAGCAGCAGTGACAGTTCAGACGAAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424392.5
ENST00000611250.4
CDS GCA 72 bp CGAGGACGGGGTTCTCCAAGCAGGACTGGACTCCTTTaGTTCACTCCTAGAATGGCTGAGACTGGCCAGCAA +
Preference number: 6 (lower is better)
Translates to: RGRGSPSRTGLL*FTPRMAETGQQ
Trigger: TTGCTGGCCAGTCTCAGCCATTCTAGGAGTGAAGCAAAGGAGTCCAGTCCTGCTTGGAGAACCCCGTCCTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS CCA 72 bp CTTTCGTCTGAACTGTCACTGCTGCTGACAGGCCTATaGCGTTTCATCCTGGAGCATCCTTCGCGCAGCTGG +
Preference number: 6 (lower is better)
Translates to: LSSELSLLLTGL*RFILEHPSRSW
Trigger: CCAGCTGCGCGAAGGATGCTCCAGGATGAAACGCCATAGGCCTGTCAGCAGCAGTGACAGTTCAGACGAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614628.5
CDS TCA 72 bp GGTCACAGAACATCTCACTCGAGCTGTCTTTTTGGGTaGCATTCCCAGACCAGCTGCCCTCCAGGCCATTGG +
Preference number: 6 (lower is better)
Translates to: GHRTSHSSCLFG*HSQTSCPPGHW
Trigger: CCAATGGCCTGGAGGGCAGCTGGTCTGGGAATGTCACCCAAAAAGACAGCTCGAGTGAGATGTTCTGTGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS GCA 72 bp ACTGAATACAAGCCCCCGTCTTCAACTTGCACAAGTTaGAGACTAAGGCCCACCGACTGGGTGGGATGTGGG +
Preference number: 6 (lower is better)
Translates to: TEYKPPSSTCTS*RLRPTDWVGCG
Trigger: CCCACATCCCACCCAGTCGGTGGGCCTTAGTCTGCAACTTGTGCAAGTTGAAGACGGGGGCTTGTATTCAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS CCA 72 bp CCTGAGAGAAGGCTGTGGAACGGTGTCTGGACTGGCTaGTACCTGGACTCCCTTTTCCCATTCTTCCTTCCA +
Preference number: 6 (lower is better)
Translates to: PERRLWNGVWTG*YLDSLFPFFLP
Trigger: TGGAAGGAAGAATGGGAAAAGGGAGTCCAGGTACCAGCCAGTCCAGACACCGTTCCACAGCCTTCTCTCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424392.5
ENST00000455411.1
ENST00000611250.4
ENST00000614628.5
CDS CCA 72 bp CTTTCGTCTGAACTGTCACTGCTGCTGACAGGCCTATaGCGTTTCATCCTGGAGCATCCTCAGCCCACACAC +
Preference number: 6 (lower is better)
Translates to: LSSELSLLLTGL*RFILEHPQPTH
Trigger: GTGTGTGGGCTGAGGATGCTCCAGGATGAAACGCCATAGGCCTGTCAGCAGCAGTGACAGTTCAGACGAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455411.1
CDS CCA 72 bp AAGTTGCAGACTAAGGCCCACCGACTGGGTGGGATGTaGGAGATCTTCGTGATCGGTTCCATCCTCTCAGGA +
Preference number: 6 (lower is better)
Translates to: KLQTKAHRLGGM*EIFVIGSILSG
Trigger: TCCTGAGAGGATGGAACCGATCACGAAGATCTCCCACATCCCACCCAGTCGGTGGGCCTTAGTCTGCAACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS TCA 72 bp AAGTGGAAGGACTTTCGTCTGAACTGTCACTGCTGCTaGCAGGCCTATGGCGTTTCATCCTGGAGCATCCGG +
Preference number: 6 (lower is better)
Translates to: KWKDFRLNCHCC*QAYGVSSWSIR
Trigger: CCGGATGCTCCAGGATGAAACGCCATAGGCCTGTCAGCAGCAGTGACAGTTCAGACGAAAGTCCTTCCACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424392.5
ENST00000611250.4
CDS TCA 72 bp CTGAGGCACCTGCATGTTCCTTATACTGTGAACAGATaGGCTGCTGTCAGGAGAGTGGGGCTGCTGATCGGT +
Preference number: 6 (lower is better)
Translates to: LRHLHVPYTVNR*AAVRRVGLLIG
Trigger: ACCGATCAGCAGCCCCACTCTCCTGACAGCAGCTCATCTGTTCACAGTATAAGGAACATGCAGGTGCCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS CCA 72 bp CTCCATGATGTTGATGTAGCCAGGCTCTGTGGTGTCTaGGCTGGAGCAGTGAATATACTTCCGGGGTCGGAT +
Preference number: 6 (lower is better)
Translates to: LHDVDVARLCGV*AGAVNILPGSD
Trigger: ATCCGACCCCGGAAGTATATTCACTGCTCCAGCCCAGACACCACAGAGCCTGGCTACATCAACATCATGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424392.5
ENST00000611250.4
ENST00000614628.5
CDS CCA 72 bp TTCTCACTTTTGGCCTGGCTCTGCTCTTTAGCCCTGTaGTGGGGGTACTCAGCTTCTCCAAGTTTCTGCCTG +
Preference number: 6 (lower is better)
Translates to: FSLLAWLCSLAL*WGYSASPSFCL
Trigger: CAGGCAGAAACTTGGAGAAGCTGAGTACCCCCACCACAGGGCTAAAGAGCAGAGCCAGGCCAAAAGTGAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS CAA 90 bp GAACACAGGCTCCTGGTCACAGAACATCTCACTCGAGCTGTCTTTTaGGGTGACATTCCCAGACCAGCTGCCCTCCAGGCCATTGGATTT +
Preference number: 6 (lower is better)
Translates to: EHRLLVTEHLTRAVF*GDIPRPAALQAIGF
Trigger: AAATCCAATGGCCTGGAGGGCAGCTGGTCTGGGAATGTCACCCAAAAAGACAGCTCGAGTGAGATGTTCTGTGACCAGGAGCCTGTGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS TCA 72 bp AAGTGGAAGGACTTTCGTCTGAACTGTCACTGCTGCTaGCAGGCCTATGGCGTTTCATCCTGGAGCATCCTC +
Preference number: 6 (lower is better)
Translates to: KWKDFRLNCHCC*QAYGVSSWSIL
Trigger: GAGGATGCTCCAGGATGAAACGCCATAGGCCTGTCAGCAGCAGTGACAGTTCAGACGAAAGTCCTTCCACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455411.1
CDS GCA 72 bp GCACCTGCATGTTCCTTATACTGTGAACAGATGAGCTaGTGTCAGGAGAGTGGGGCTGCTGATCGGTTTCTG +
Preference number: 6 (lower is better)
Translates to: APACSLYCEQMS*CQESGAADRFL
Trigger: CAGAAACCGATCAGCAGCCCCACTCTCCTGACAGCAGCTCATCTGTTCACAGTATAAGGAACATGCAGGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS GCA 72 bp GCAATAGCCATCATTTTCCTGATATGGAGCTCTCCCTaGAGACCGCCTGAGAACCTGTCTACCCCAGAACTG +
Preference number: 6 (lower is better)
Translates to: AIAIIFLIWSSP*RPPENLSTPEL
Trigger: CAGTTCTGGGGTAGACAGGTTCTCAGGCGGTCTGCAGGGAGAGCTCCATATCAGGAAAATGATGGCTATTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS TCA 72 bp CTAAAGTGTTCTACAGTGGATTTTCTAAAGCTGCCCTaGCTGACCAAGTGGGGGCTGAACACAGGCTCCTGG +
Preference number: 6 (lower is better)
Translates to: LKCSTVDFLKLP*LTKWGLNTGSW
Trigger: CCAGGAGCCTGTGTTCAGCCCCCACTTGGTCAGTCAGGGCAGCTTTAGAAAATCCACTGTAGAACACTTTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS TCA 72 bp AAGTGGAAGGACTTTCGTCTGAACTGTCACTGCTGCTaGCAGGCCTATGGCGTTTCATCCTGGAGCATCCTT +
Preference number: 6 (lower is better)
Translates to: KWKDFRLNCHCC*QAYGVSSWSIL
Trigger: AAGGATGCTCCAGGATGAAACGCCATAGGCCTGTCAGCAGCAGTGACAGTTCAGACGAAAGTCCTTCCACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614628.5
CDS GCA 72 bp GCCCTGTGGTGGGGGTACTCAGCTTCTCCAAGTTTCTaGCTGTTTTGGCTATGCTTGAGGCAATATGACTTG +
Preference number: 6 (lower is better)
Translates to: ALWWGYSASPSF*LFWLCLRQYDL
Trigger: CAAGTCATATTGCCTCAAGCATAGCCAAAACAGGCAGAAACTTGGAGAAGCTGAGTACCCCCACCACAGGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS CCA 72 bp CAAGCAGGACTGGACTCCTTTGCTTCACTCCTAGAATaGCTGAGACTGGCCAGCAAACGGTTATTCTTGCTC +
Preference number: 6 (lower is better)
Translates to: QAGLDSFASLLE*LRLASKRLFLL
Trigger: GAGCAAGAATAACCGTTTGCTGGCCAGTCTCAGCCATTCTAGGAGTGAAGCAAAGGAGTCCAGTCCTGCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS TCA 72 bp TCCAGGCCATTGGATTTGGCAAACTTGGAGTTAGGCTaGCTTTTCCCATTCCCAATGGAAGACTGTCCATGG +
Preference number: 6 (lower is better)
Translates to: SRPLDLANLELG*LFPFPMEDCPW
Trigger: CCATGGACAGTCTTCCATTGGGAATGGGAAAAGTCAGCCTAACTCCAAGTTTGCCAAATCCAATGGCCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS CAA 72 bp CACCTTTGCATTGAACTGTGGGAAAGGGGATGTGTCTaGCTTTTACCATGGCAATCCCGTCTAGAGTCATGG +
Preference number: 6 (lower is better)
Translates to: HLCIELWERGCV*LLPWQSRLESW
Trigger: CCATGACTCTAGACGGGATTGCCATGGTAAAAGCAAGACACATCCCCTTTCCCACAGTTCAATGCAAAGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS CCA 72 bp GTCTTGCTTTTACCATGGCAATCCCGTCTAGAGTCATaGGGAGGATTTTCCCTGTCTGAGCTATCTTTCCTT +
Preference number: 6 (lower is better)
Translates to: VLLLPWQSRLES*GGFSLSELSFL
Trigger: AAGGAAAGATAGCTCAGACAGGGAAAATCCTCCCCATGACTCTAGACGGGATTGCCATGGTAAAAGCAAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS CAA 90 bp GCTTCACTCCTAGAATGGCTGAGACTGGCCAGCAAACGGTTATTCTaGCTCTCTAGTGGGTATCTCGGATACGATTTTGTTCTCATTTCT +
Preference number: 6 (lower is better)
Translates to: ASLLEWLRLASKRLF*LSSGYLGYDFVLIS
Trigger: AGAAATGAGAACAAAATCGTATCCGAGATACCCACTAGAGAGCAAGAATAACCGTTTGCTGGCCAGTCTCAGCCATTCTAGGAGTGAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS CAA 72 bp TTCTGCCTGTTTTGGCTATGCTTGAGGCAATATGACTaGAACTTCACTTCGTCTCCCTCATCTAGGATGGTC +
Preference number: 6 (lower is better)
Translates to: FCLFWLCLRQYD*NFTSSPSSRMV
Trigger: GACCATCCTAGATGAGGGAGACGAAGTGAAGTTCAAGTCATATTGCCTCAAGCATAGCCAAAACAGGCAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS CAA 72 bp CTAGAATGGCTGAGACTGGCCAGCAAACGGTTATTCTaGCTCTCTAGTGGGTATCTCGGATACGATTTTGTT +
Preference number: 6 (lower is better)
Translates to: LEWLRLASKRLF*LSSGYLGYDFV
Trigger: AACAAAATCGTATCCGAGATACCCACTAGAGAGCAAGAATAACCGTTTGCTGGCCAGTCTCAGCCATTCTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS CAA 90 bp GCAAACGGTTATTCTTGCTCTCTAGTGGGTATCTCGGATACGATTTaGTTCTCATTTCTAGTGACTCCTGAGGCACCTGCATGTTCCTTA +
Preference number: 6 (lower is better)
Translates to: ANGYSCSLVGISDTI*FSFLVTPEAPACSL
Trigger: TAAGGAACATGCAGGTGCCTCAGGAGTCACTAGAAATGAGAACAAAATCGTATCCGAGATACCCACTAGAGAGCAAGAATAACCGTTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS GCA 72 bp GTATTTTGTTGTGTGACAGCTTCAGCTTCTCTCGTCTaGTTATCATATAGCACAGATTTCGGACCCTCTCCA +
Preference number: 6 (lower is better)
Translates to: VFCCVTASASLV*LSYSTDFGPSP
Trigger: TGGAGAGGGTCCGAAATCTGTGCTATATGATAAGCAGACGAGAGAAGCTGAAGCTGTCACACAACAAAATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS GCA 72 bp AAGGTTGGGTCATCCTTGGAAGTTTCTAATCACCTTTaGATTGAACTGTGGGAAAGGGGATGTGTCTTGCTT +
Preference number: 6 (lower is better)
Translates to: KVGSSLEVSNHL*IELWERGCVLL
Trigger: AAGCAAGACACATCCCCTTTCCCACAGTTCAATGCAAAGGTGATTAGAAACTTCCAAGGATGACCCAACCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS CCA 72 bp GAGGTAATAGCTATCAGGATTAATGTGGTGAGAATCTaGAAGTTTCATGGCACTGATGAGGTCCTTCCGGAA +
Preference number: 6 (lower is better)
Translates to: EVIAIRINVVRI*KFHGTDEVLPE
Trigger: TTCCGGAAGGACCTCATCAGTGCCATGAAACTTCCAGATTCTCACCACATTAATCCTGATAGCTATTACCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424392.5
ENST00000455411.1
ENST00000611250.4
ENST00000614628.5
CDS CCA 72 bp TCCTTGGAAGTTTCTAATCACCTTTGCATTGAACTGTaGGAAAGGGGATGTGTCTTGCTTTTACCATGGCAA +
Preference number: 6 (lower is better)
Translates to: SLEVSNHLCIEL*ERGCVLLLPWQ
Trigger: TTGCCATGGTAAAAGCAAGACACATCCCCTTTCCCACAGTTCAATGCAAAGGTGATTAGAAACTTCCAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS CAA 72 bp TCTGTGGAGCTGTTTCTGTGGTCTTCTGGGGTTGATTaGGGCATTTTTAACTTCAAGGTAATTCTTGGTGGT +
Preference number: 6 (lower is better)
Translates to: SVELFLWSSGVD*GIFNFKVILGG
Trigger: ACCACCAAGAATTACCTTGAAGTTAAAAATGCCCAAATCAACCCCAGAAGACCACAGAAACAGCTCCACAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS CAA 72 bp TTGGGTCATCCTTGGAAGTTTCTAATCACCTTTGCATaGAACTGTGGGAAAGGGGATGTGTCTTGCTTTTAC +
Preference number: 6 (lower is better)
Translates to: LGHPWKFLITFA*NCGKGDVSCFY
Trigger: GTAAAAGCAAGACACATCCCCTTTCCCACAGTTCAATGCAAAGGTGATTAGAAACTTCCAAGGATGACCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS GCA 72 bp AGCCCTGCATCAATTTCTTGGTTAAGAAGCTGGACTTaGAAACCGAAGATCTGTTCCTGTATTTTGTTGTGT +
Preference number: 6 (lower is better)
Translates to: SPASISWLRSWT*KPKICSCILLC
Trigger: ACACAACAAAATACAGGAACAGATCTTCGGTTTGCAAGTCCAGCTTCTTAACCAAGAAATTGATGCAGGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS CAA 72 bp AAGCCCTGCATCAATTTCTTGGTTAAGAAGCTGGACTaGCAAACCGAAGATCTGTTCCTGTATTTTGTTGTG +
Preference number: 6 (lower is better)
Translates to: KPCINFLVKKLD*QTEDLFLYFVV
Trigger: CACAACAAAATACAGGAACAGATCTTCGGTTTGCAAGTCCAGCTTCTTAACCAAGAAATTGATGCAGGGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611250.4
ENST00000614628.5
CDS CAA 90 bp CGGAATACCTCAGCAGGTTTCTTGTGTTCATTTGGAATTTTTGACTaGATCCTATACATTGAGCCAGAAGTAAAGGAAGTGGAAGGACTT +
Preference number: 6 (lower is better)
Translates to: RNTSAGFLCSFGIFD*ILYIEPEVKEVEGL
Trigger: AAGTCCTTCCACTTCCTTTACTTCTGGCTCAATGTATAGGATCAAGTCAAAAATTCCAAATGAACACAAGAAACCTGCTGAGGTATTCCG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000424392.5
ENST00000455411.1
ENST00000611250.4
ENST00000614628.5