RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for JADE1 (Homo sapiens)

Ensembl gene IDs: ENSG00000077684

Ensembl transcript IDs: ENST00000226319.11, ENST00000413543.6, ENST00000452328.6, ENST00000503785.5, ENST00000504089.5, ENST00000507833.5, ENST00000508997.1, ENST00000510308.5, ENST00000511647.5, ENST00000511925.5, ENST00000512960.5, ENST00000514740.1, ENST00000610919.4, ENST00000611140.4

Found 976 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GAATCCCACCCATACCCGCACACAGACACACAACAGAGACATGGATaGACACGGGCACGCGCACACACACACACACACACAGCCTCAGTG +
Preference number: 1 (lower is better)
Translates to: ESHPYPHTDTQQRHG*TRARAHTHTHTASV
Trigger: CACTGAGGCTGTGTGTGTGTGTGTGTGTGCGCGTGCCCGTGTCCATCCATGTCTCTGTTGTGTGTCTGTGTGCGGGTATGGGTGGGATTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
3UTR TCA 90 bp ACCCACTGCCTGCTCTGCTCCATGACAGTACTGGGAATTCCCCTGTaGATTACCCAAGAAACAAAGTGGGGGCCAGTGAGCAGCCGTGCT +
Preference number: 1 (lower is better)
Translates to: THCLLCSMTVLGIPL*ITQETKWGPVSSRA
Trigger: AGCACGGCTGCTCACTGGCCCCCACTTTGTTTCTTGGGTAATTCACAGGGGAATTCCCAGTACTGTCATGGAGCAGAGCAGGCAGTGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
3UTR TCA 90 bp GGGGAGGCACAAAAGCAGCAAACAGCAGAAGGAAATGCCAGCAGCTaGGGCTCGGCAGCCAACAGCCACGACATTCAGCAATCTCAGTGT +
Preference number: 1 (lower is better)
Translates to: GEAQKQQTAEGNASS*GSAANSHDIQQSQC
Trigger: ACACTGAGATTGCTGAATGTCGTGGCTGTTGGCTGCCGAGCCTCAGCTGCTGGCATTTCCTTCTGCTGTTTGCTGCTTTTGTGCCTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
3UTR TCA 90 bp TGGGAATTCCCCTGTGAATTACCCAAGAAACAAAGTGGGGGCCAGTaGGCAGCCGTGCTTAGCTTCCTTCATAAGCCCATCACCAGCACC +
Preference number: 1 (lower is better)
Translates to: WEFPCELPKKQSGGQ*AAVLSFLHKPITST
Trigger: GGTGCTGGTGATGGGCTTATGAAGGAAGCTAAGCACGGCTGCTCACTGGCCCCCACTTTGTTTCTTGGGTAATTCACAGGGGAATTCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
3UTR TCA 90 bp ATTATTCCTGTAGCAGGAAGGGACGTCCAGACGGGACTCCAGAGGTaGTGGAAAGTGGGGGAGGCACAAAAGCAGCAAACAGCAGAAGGA +
Preference number: 1 (lower is better)
Translates to: IIPVAGRDVQTGLQR*WKVGEAQKQQTAEG
Trigger: TCCTTCTGCTGTTTGCTGCTTTTGTGCCTCCCCCACTTTCCATCACCTCTGGAGTCCCGTCTGGACGTCCCTTCCTGCTACAGGAATAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
3UTR GCA 90 bp CCTGTGAATTACCCAAGAAACAAAGTGGGGGCCAGTGAGCAGCCGTaGTTAGCTTCCTTCATAAGCCCATCACCAGCACCTAGGTGTGTT +
Preference number: 1 (lower is better)
Translates to: PVNYPRNKVGASEQP*LASFISPSPAPRCV
Trigger: AACACACCTAGGTGCTGGTGATGGGCTTATGAAGGAAGCTAAGCACGGCTGCTCACTGGCCCCCACTTTGTTTCTTGGGTAATTCACAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
3UTR GCA 90 bp CAGGTCTTTCCCTACACTGTTTCAGGCCACTTGGGTACCTTTCAGTaGAGACTGCTTCAGGCCAGAAAACCTCACTCCCACCTCTTTCAC +
Preference number: 1 (lower is better)
Translates to: QVFPYTVSGHLGTFQ*RLLQARKPHSHLFH
Trigger: GTGAAAGAGGTGGGAGTGAGGTTTTCTGGCCTGAAGCAGTCTGCACTGAAAGGTACCCAAGTGGCCTGAAACAGTGTAGGGAAAGACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
3UTR TCA 90 bp CAACACAACCTCATGCTGTGGTGTGTACAAGGGTCTGAGAGTATATaGCTGGCTATCATTTCTTGCTCTGGGCGAGCGTTCGCCTCTTTG +
Preference number: 1 (lower is better)
Translates to: QHNLMLWCVQGSESI*LAIISCSGRAFASL
Trigger: CAAAGAGGCGAACGCTCGCCCAGAGCAAGAAATGATAGCCAGTCATATACTCTCAGACCCTTGTACACACCACAGCATGAGGTTGTGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
3UTR GCA 90 bp GTCCCATATCCACAACCCACTCACAGGCTTCAAGCAGCAGGACCTTaGCATATTACCCTAAATCTCCATATTGCAGCAGCTCTACCCTGT +
Preference number: 1 (lower is better)
Translates to: VPYPQPTHRLQAAGP*HITLNLHIAAALPC
Trigger: ACAGGGTAGAGCTGCTGCAATATGGAGATTTAGGGTAATATGGCAAGGTCCTGCTGCTTGAAGCCTGTGAGTGGGTTGTGGATATGGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
3UTR CCA 90 bp ACAACCTCATGCTGTGGTGTGTACAAGGGTCTGAGAGTATATGACTaGCTATCATTTCTTGCTCTGGGCGAGCGTTCGCCTCTTTGCATC +
Preference number: 1 (lower is better)
Translates to: TTSCCGVYKGLRVYD*LSFLALGERSPLCI
Trigger: GATGCAAAGAGGCGAACGCTCGCCCAGAGCAAGAAATGATAGCCAGTCATATACTCTCAGACCCTTGTACACACCACAGCATGAGGTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
3UTR CCA 90 bp CATTCATGTTGGAAGCCCAGATTCCCTAACATATGCACTAGTGGTTaGCTCTGGGAAGTAACAGTCACCAGAGTCTGGAAGTTCTTCGCT +
Preference number: 1 (lower is better)
Translates to: HSCWKPRFPNICTSG*LWEVTVTRVWKFFA
Trigger: AGCGAAGAACTTCCAGACTCTGGTGACTGTTACTTCCCAGAGCCAACCACTAGTGCATATGTTAGGGAATCTGGGCTTCCAACATGAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
3UTR CCA 90 bp TCTGACTCCATAGCTCATGCACCCCAATTACAGCAGGTGTCGGGCTaGCATAAAGGCTTCTTACCAGGATTCCAGTTTATCCTTCTCAAT +
Preference number: 1 (lower is better)
Translates to: SDSIAHAPQLQQVSG*HKGFLPGFQFILLN
Trigger: ATTGAGAAGGATAAACTGGAATCCTGGTAAGAAGCCTTTATGCCAGCCCGACACCTGCTGTAATTGGGGTGCATGAGCTATGGAGTCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
3UTR GCA 90 bp GGGGAAGTCGGGCTTGTTCCAAAGGCCCATAATTCTGTATCTCATTaGTATTTAAACGTTCCTTCCTTAAGTTTGATTCACAACCACATT +
Preference number: 1 (lower is better)
Translates to: GEVGLVPKAHNSVSH*YLNVPSLSLIHNHI
Trigger: AATGTGGTTGTGAATCAAACTTAAGGAAGGAACGTTTAAATAGCAATGAGATACAGAATTATGGGCCTTTGGAACAAGCCCGACTTCCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
3UTR GCA 90 bp TTGACAAATTATCCCTCTATAAATTCTACTCTCACCCAGAGCTGTTaGTGTAATCAAAAGATAACTGTAGATAAAGTCCAACCTTCTCCT +
Preference number: 1 (lower is better)
Translates to: LTNYPSINSTLTQSC*CNQKITVDKVQPSP
Trigger: AGGAGAAGGTTGGACTTTATCTACAGTTATCTTTTGATTACAGCAACAGCTCTGGGTGAGAGTAGAATTTATAGAGGGATAATTTGTCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
3UTR CCA 90 bp TTTATTTTAGTGTTCAGTTCGGGTTCTAGTCTTAGCAGTGTCTTATaGTTACAATCTACTCTTCTGTTTCCTCAACAAGTTGCAAATAAC +
Preference number: 1 (lower is better)
Translates to: FILVFSSGSSLSSVL*LQSTLLFPQQVANN
Trigger: GTTATTTGCAACTTGTTGAGGAAACAGAAGAGTAGATTGTAACCATAAGACACTGCTAAGACTAGAACCCGAACTGAACACTAAAATAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
3UTR-3UTR TCA 90 bp ACTGCTCCAGGATCCTGCCTCTTCCAGGGCCGGAATCCGCGGCCTTCCCAGGAAGGAAATGCCAGCAGCTaGGGCTCGGCAGCCAACAGC +
Preference number: 2 (lower is better)
Translates to: TAPGSCLFQGRNPRPSQEGNASS*GSAANS
Trigger: GCTGTTGGCTGCCGAGCCTCAGCTGCTGGCATTTCC...TTCCTGGGAAGGCCGCGGATTCCGGCCCTGGAAGAGGCAGGATCCTGGAGCAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
3UTR-3UTR TCA 90 bp ACTGCTCCAGGATCCTGCCTCTTCCAGGGCCGGAATCCGCGGCCTTCCCAGGAACTCCTCAGACAGATCTaGCACCCCTGTCCACCAGGA +
Preference number: 2 (lower is better)
Translates to: TAPGSCLFQGRNPRPSQELLRQI*HPCPPG
Trigger: TCCTGGTGGACAGGGGTGTCAGATCTGTCTGAGGAG...TTCCTGGGAAGGCCGCGGATTCCGGCCCTGGAAGAGGCAGGATCCTGGAGCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
3UTR-3UTR CCA 90 bp ACTGCTCCAGGATCCTGCCTCTTCCAGGGCCGGAATCCGCGGCCTTCCCAGGAATCTAGAATGAAGGAATaGGGGTGGGGAAGACACACC +
Preference number: 2 (lower is better)
Translates to: TAPGSCLFQGRNPRPSQESRMKE*GWGRHT
Trigger: GGTGTGTCTTCCCCACCCCCATTCCTTCATTCTAGA...TTCCTGGGAAGGCCGCGGATTCCGGCCCTGGAAGAGGCAGGATCCTGGAGCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
3UTR-3UTR GCA 90 bp TCCTCAGACAGATCTGACACCCCTGTCCACCAGGAATCCCACCCATACCCGCACCTGGCTATCATTTCTTaGTCTGGGCGAGCGTTCGCC +
Preference number: 2 (lower is better)
Translates to: SSDRSDTPVHQESHPYPHLAIIS*SGRAFA
Trigger: GGCGAACGCTCGCCCAGAGCAAGAAATGATAGCCAG...GTGCGGGTATGGGTGGGATTCCTGGTGGACAGGGGTGTCAGATCTGTCTGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
3UTR-3UTR GCA 90 bp TCCTCAGACAGATCTGACACCCCTGTCCACCAGGAATCCCACCCATACCCGCACACCCACTGCCTGCTCTaGTCCATGACAGTACTGGGA +
Preference number: 2 (lower is better)
Translates to: SSDRSDTPVHQESHPYPHTHCLL*SMTVLG
Trigger: TCCCAGTACTGTCATGGAGCAGAGCAGGCAGTGGGT...GTGCGGGTATGGGTGGGATTCCTGGTGGACAGGGGTGTCAGATCTGTCTGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
3UTR-3UTR GCA 90 bp ACAAAACTGCTCCAGGATCCTGCCTCTTCCAGGGCCGGAATCCGCGGCCTTCCCTTGGGTACCTTTCAGTaGAGACTGCTTCAGGCCAGA +
Preference number: 2 (lower is better)
Translates to: TKLLQDPASSRAGIRGLPLGTFQ*RLLQAR
Trigger: TCTGGCCTGAAGCAGTCTGCACTGAAAGGTACCCAA...GGGAAGGCCGCGGATTCCGGCCCTGGAAGAGGCAGGATCCTGGAGCAGTTTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
3UTR-3UTR GCA 90 bp AGGAAATGCCAGCAGCTGAGGCTCGGCAGCCAACAGCCACGACATTCAGCAATCACCCACTGCCTGCTCTaGTCCATGACAGTACTGGGA +
Preference number: 2 (lower is better)
Translates to: RKCQQLRLGSQQPRHSAITHCLL*SMTVLG
Trigger: TCCCAGTACTGTCATGGAGCAGAGCAGGCAGTGGGT...GATTGCTGAATGTCGTGGCTGTTGGCTGCCGAGCCTCAGCTGCTGGCATTTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
3UTR-3UTR GCA 90 bp ACGCCTCATTATTCCTGTAGCAGGAAGGGACGTCCAGACGGGACTCCAGAGGTGCACATCAGCACCCACTaGCTGCTCTGCTCCATGACA +
Preference number: 2 (lower is better)
Translates to: TPHYSCSRKGRPDGTPEVHISTH*LLCSMT
Trigger: TGTCATGGAGCAGAGCAGGCAGTGGGTGCTGATGTG...CACCTCTGGAGTCCCGTCTGGACGTCCCTTCCTGCTACAGGAATAATGAGGCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
3UTR-3UTR CCA 90 bp GGGACGTCCAGACGGGACTCCAGAGGTGATGGAAAGTGGGGGAGGCACAAAAGCTCTAGAATGAAGGAATaGGGGTGGGGAAGACACACC +
Preference number: 2 (lower is better)
Translates to: GTSRRDSRGDGKWGRHKSSRMKE*GWGRHT
Trigger: GGTGTGTCTTCCCCACCCCCATTCCTTCATTCTAGA...GCTTTTGTGCCTCCCCCACTTTCCATCACCTCTGGAGTCCCGTCTGGACGTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
3UTR-3UTR GCA 90 bp AAGGAAATGCCAGCAGCTGAGGCTCGGCAGCCAACAGCCACGACATTCAGCAATCACATCAGCACCCACTaGCTGCTCTGCTCCATGACA +
Preference number: 2 (lower is better)
Translates to: KEMPAAEARQPTATTFSNHISTH*LLCSMT
Trigger: TGTCATGGAGCAGAGCAGGCAGTGGGTGCTGATGTG...ATTGCTGAATGTCGTGGCTGTTGGCTGCCGAGCCTCAGCTGCTGGCATTTCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
3UTR-3UTR TCA 90 bp ATGCACCCCAATTACAGCAGGTGTCGGGCTGGCATAAAGGCTTCTTACCAGGATGCCTGCTCTGCTCCATaGCAGTACTGGGAATTCCCC +
Preference number: 2 (lower is better)
Translates to: MHPNYSRCRAGIKASYQDACSAP*QYWEFP
Trigger: GGGGAATTCCCAGTACTGTCATGGAGCAGAGCAGGC...ATCCTGGTAAGAAGCCTTTATGCCAGCCCGACACCTGCTGTAATTGGGGTGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
3UTR-3UTR GCA 90 bp GACTCCATAGCTCATGCACCCCAATTACAGCAGGTGTCGGGCTGGCATAAAGGCGCCAGTGAGCAGCCGTaGTTAGCTTCCTTCATAAGC +
Preference number: 2 (lower is better)
Translates to: DSIAHAPQLQQVSGWHKGASEQP*LASFIS
Trigger: GCTTATGAAGGAAGCTAAGCACGGCTGCTCACTGGC...GCCTTTATGCCAGCCCGACACCTGCTGTAATTGGGGTGCATGAGCTATGGAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
3UTR-3UTR CCA 90 bp GGGACGTCCAGACGGGACTCCAGAGGTGATGGAAAGTGGGGGAGGCACAAAAGCCTTGGGTCATTTTCTTaGGGCTCATTCACTCTAGCT +
Preference number: 2 (lower is better)
Translates to: GTSRRDSRGDGKWGRHKSLGSFS*GSFTLA
Trigger: AGCTAGAGTGAATGAGCCCCAAGAAAATGACCCAAG...GCTTTTGTGCCTCCCCCACTTTCCATCACCTCTGGAGTCCCGTCTGGACGTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
3UTR-3UTR CCA 90 bp ACGCCTCATTATTCCTGTAGCAGGAAGGGACGTCCAGACGGGACTCCAGAGGTGCCTGAGTCAACTCCTTaGGTCATTTTCTTGGGGCTC +
Preference number: 2 (lower is better)
Translates to: TPHYSCSRKGRPDGTPEVPESTP*VIFLGL
Trigger: GAGCCCCAAGAAAATGACCCAAGGAGTTGACTCAGG...CACCTCTGGAGTCCCGTCTGGACGTCCCTTCCTGCTACAGGAATAATGAGGCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
3UTR-3UTR CCA 90 bp ACAAAACTGCTCCAGGATCCTGCCTCTTCCAGGGCCGGAATCCGCGGCCTTCCCAAATTTTCCCATCTCTaGCCCCCTCCATTAGAAATG +
Preference number: 2 (lower is better)
Translates to: TKLLQDPASSRAGIRGLPKFSHL*PPPLEM
Trigger: CATTTCTAATGGAGGGGGCCAGAGATGGGAAAATTT...GGGAAGGCCGCGGATTCCGGCCCTGGAAGAGGCAGGATCCTGGAGCAGTTTTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
3UTR-3UTR TCA 90 bp TCCTCAGACAGATCTGACACCCCTGTCCACCAGGAATCCCACCCATACCCGCACGGGTCTGAGAGTATATaGCTGGCTATCATTTCTTGC +
Preference number: 2 (lower is better)
Translates to: SSDRSDTPVHQESHPYPHGSESI*LAIISC
Trigger: GCAAGAAATGATAGCCAGTCATATACTCTCAGACCC...GTGCGGGTATGGGTGGGATTCCTGGTGGACAGGGGTGTCAGATCTGTCTGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
3UTR-3UTR TCA 90 bp ACTGCTCCAGGATCCTGCCTCTTCCAGGGCCGGAATCCGCGGCCTTCCCAGGAAAAGACACACCCCATTTaGTCTTACAAAACAGTAAAG +
Preference number: 2 (lower is better)
Translates to: TAPGSCLFQGRNPRPSQEKTHPI*SYKTVK
Trigger: CTTTACTGTTTTGTAAGATCAAATGGGGTGTGTCTT...TTCCTGGGAAGGCCGCGGATTCCGGCCCTGGAAGAGGCAGGATCCTGGAGCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
3UTR-3UTR TCA 90 bp GCAGCCAACAGCCACGACATTCAGCAATCTCAGTGTGACAAACAACACATCTGTCAAAGTGGGGGCCAGTaGGCAGCCGTGCTTAGCTTC +
Preference number: 2 (lower is better)
Translates to: AANSHDIQQSQCDKQHICQSGGQ*AAVLSF
Trigger: GAAGCTAAGCACGGCTGCTCACTGGCCCCCACTTTG...ACAGATGTGTTGTTTGTCACACTGAGATTGCTGAATGTCGTGGCTGTTGGCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
3UTR-3UTR CCA 90 bp GACTCCATAGCTCATGCACCCCAATTACAGCAGGTGTCGGGCTGGCATAAAGGCCACAACCTCATGCTGTaGTGTGTACAAGGGTCTGAG +
Preference number: 2 (lower is better)
Translates to: DSIAHAPQLQQVSGWHKGHNLML*CVQGSE
Trigger: CTCAGACCCTTGTACACACCACAGCATGAGGTTGTG...GCCTTTATGCCAGCCCGACACCTGCTGTAATTGGGGTGCATGAGCTATGGAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
3UTR-3UTR CCA 90 bp AAGGAAATGCCAGCAGCTGAGGCTCGGCAGCCAACAGCCACGACATTCAGCAATCCTGAGTCAACTCCTTaGGTCATTTTCTTGGGGCTC +
Preference number: 2 (lower is better)
Translates to: KEMPAAEARQPTATTFSNPESTP*VIFLGL
Trigger: GAGCCCCAAGAAAATGACCCAAGGAGTTGACTCAGG...ATTGCTGAATGTCGTGGCTGTTGGCTGCCGAGCCTCAGCTGCTGGCATTTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
3UTR-3UTR TCA 90 bp ACGCCTCATTATTCCTGTAGCAGGAAGGGACGTCCAGACGGGACTCCAGAGGTGTGTGTTTCCCCGGACTaGACAAGAAATTTTCCCATC +
Preference number: 2 (lower is better)
Translates to: TPHYSCSRKGRPDGTPEVCVSPD*TRNFPI
Trigger: GATGGGAAAATTTCTTGTTCAGTCCGGGGAAACACA...CACCTCTGGAGTCCCGTCTGGACGTCCCTTCCTGCTACAGGAATAATGAGGCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
3UTR-3UTR GCA 90 bp ATAGCTCATGCACCCCAATTACAGCAGGTGTCGGGCTGGCATAAAGGCTTCTTACTGGCTATCATTTCTTaGTCTGGGCGAGCGTTCGCC +
Preference number: 2 (lower is better)
Translates to: IAHAPQLQQVSGWHKGFLLAIIS*SGRAFA
Trigger: GGCGAACGCTCGCCCAGAGCAAGAAATGATAGCCAG...TAAGAAGCCTTTATGCCAGCCCGACACCTGCTGTAATTGGGGTGCATGAGCTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
3UTR-3UTR CCA 90 bp GACTCCAGAGGTGATGGAAAGTGGGGGAGGCACAAAAGCAGCAAACAGCAGAAGCACAACCTCATGCTGTaGTGTGTACAAGGGTCTGAG +
Preference number: 2 (lower is better)
Translates to: DSRGDGKWGRHKSSKQQKHNLML*CVQGSE
Trigger: CTCAGACCCTTGTACACACCACAGCATGAGGTTGTG...CTTCTGCTGTTTGCTGCTTTTGTGCCTCCCCCACTTTCCATCACCTCTGGAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
3UTR-3UTR CCA 90 bp GAGACAAACACAGTCCAAACAATAGACTTCTTGTCCTCCCCCTCCCAACAACTACCACCAGGGGGCGTATaGGAGCACAAAAGCCTCACA +
Preference number: 2 (lower is better)
Translates to: ETNTVQTIDFLSSPSQQLPPGGV*EHKSLT
Trigger: TGTGAGGCTTTTGTGCTCCCATACGCCCCCTGGTGG...TAGTTGTTGGGAGGGGGAGGACAAGAAGTCTATTGTTTGGACTGTGTTTGTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
3UTR CAA 90 bp AGTCCCATATCCACAACCCACTCACAGGCTTCAAGCAGCAGGACCTaGCCATATTACCCTAAATCTCCATATTGCAGCAGCTCTACCCTG +
Preference number: 2 (lower is better)
Translates to: SPISTTHSQASSSRT*PYYPKSPYCSSSTL
Trigger: CAGGGTAGAGCTGCTGCAATATGGAGATTTAGGGTAATATGGCAAGGTCCTGCTGCTTGAAGCCTGTGAGTGGGTTGTGGATATGGGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
3UTR CAA 90 bp TTGGCTCTGGGAAGTAACAGTCACCAGAGTCTGGAAGTTCTTCGCTaGAACTTGAGTAGCCACTGTACTATTGGAAGCCAGATGGCCAGG +
Preference number: 2 (lower is better)
Translates to: LALGSNSHQSLEVLR*NLSSHCTIGSQMAR
Trigger: CCTGGCCATCTGGCTTCCAATAGTACAGTGGCTACTCAAGTTCAAGCGAAGAACTTCCAGACTCTGGTGACTGTTACTTCCCAGAGCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
3UTR-3UTR TCA 90 bp TCCCCTGTGAATTACCCAAGAAACAAAGTGGGGGCCAGTGAGCAGCCGTGCTTAGGGTCTGAGAGTATATaGCTGGCTATCATTTCTTGC +
Preference number: 2 (lower is better)
Translates to: SPVNYPRNKVGASEQPCLGSESI*LAIISC
Trigger: GCAAGAAATGATAGCCAGTCATATACTCTCAGACCC...TAAGCACGGCTGCTCACTGGCCCCCACTTTGTTTCTTGGGTAATTCACAGGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
3UTR-3UTR TCA 90 bp CAAAGTCTTCTTTACACTCACCACCAGGGGGCGTATGGGAGCACAAAAGCCTCAGTCTGTAAACCATCCTaGGTCAACTCCTTGGGTCAT +
Preference number: 2 (lower is better)
Translates to: QSLLYTHHQGAYGSTKASVCKPS*VNSLGH
Trigger: ATGACCCAAGGAGTTGACTCAGGATGGTTTACAGAC...TGAGGCTTTTGTGCTCCCATACGCCCCCTGGTGGTGAGTGTAAAGAAGACTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
3UTR-3UTR GCA 90 bp ATGCACCCCAATTACAGCAGGTGTCGGGCTGGCATAAAGGCTTCTTACCAGGATTGTACATACAGCTCATaGACACACATCAGCACCCAC +
Preference number: 2 (lower is better)
Translates to: MHPNYSRCRAGIKASYQDCTYSS*THISTH
Trigger: GTGGGTGCTGATGTGTGTGCATGAGCTGTATGTACA...ATCCTGGTAAGAAGCCTTTATGCCAGCCCGACACCTGCTGTAATTGGGGTGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
3UTR-3UTR CCA 90 bp GACTCCAGAGGTGATGGAAAGTGGGGGAGGCACAAAAGCAGCAAACAGCAGAAGCTTGGGTCATTTTCTTaGGGCTCATTCACTCTAGCT +
Preference number: 2 (lower is better)
Translates to: DSRGDGKWGRHKSSKQQKLGSFS*GSFTLA
Trigger: AGCTAGAGTGAATGAGCCCCAAGAAAATGACCCAAG...CTTCTGCTGTTTGCTGCTTTTGTGCCTCCCCCACTTTCCATCACCTCTGGAGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
3UTR CAA 90 bp CTGGGAAGTAACAGTCACCAGAGTCTGGAAGTTCTTCGCTTGAACTaGAGTAGCCACTGTACTATTGGAAGCCAGATGGCCAGGTATTGG +
Preference number: 2 (lower is better)
Translates to: LGSNSHQSLEVLRLN*SSHCTIGSQMARYW
Trigger: CCAATACCTGGCCATCTGGCTTCCAATAGTACAGTGGCTACTCAAGTTCAAGCGAAGAACTTCCAGACTCTGGTGACTGTTACTTCCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
3UTR-3UTR GCA 90 bp GAGAGGCAAAGTCTTCTTTACACTCACCACCAGGGGGCGTATGGGAGCACAAAAGAGCGTTCGCCTCTTTaGATCTTCTTCTCTAAGTCA +
Preference number: 2 (lower is better)
Translates to: ERQSLLYTHHQGAYGSTKERSPL*IFFSKS
Trigger: TGACTTAGAGAAGAAGATGCAAAGAGGCGAACGCTC...TTTTGTGCTCCCATACGCCCCCTGGTGGTGAGTGTAAAGAAGACTTTGCCTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
3UTR-3UTR GCA 90 bp GACAGTACTGGGAATTCCCCTGTGAATTACCCAAGAAACAAAGTGGGGGCCAGTACCAACACAACCTCATaGTGTGGTGTGTACAAGGGT +
Preference number: 2 (lower is better)
Translates to: DSTGNSPVNYPRNKVGASTNTTS*CGVYKG
Trigger: ACCCTTGTACACACCACAGCATGAGGTTGTGTTGGT...ACTGGCCCCCACTTTGTTTCTTGGGTAATTCACAGGGGAATTCCCAGTACTGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
3UTR-3UTR CCA 90 bp CAGGGAAATCCCAAGCTGGCTCAAGAGCCAGTGGTTAGGGAAGAAGAAGGTCAACATGAGTTTGTGCTTTaGGAAGAATGCAGAGGGCTA +
Preference number: 2 (lower is better)
Translates to: QGNPKLAQEPVVREEEGQHEFVL*EECRGL
Trigger: TAGCCCTCTGCATTCTTCCCAAAGCACAAACTCATG...TTGACCTTCTTCTTCCCTAACCACTGGCTCTTGAGCCAGCTTGGGATTTCCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
3UTR-3UTR CCA 90 bp TCCCCTGTGAATTACCCAAGAAACAAAGTGGGGGCCAGTGAGCAGCCGTGCTTAAAATTTTCCCATCTCTaGCCCCCTCCATTAGAAATG +
Preference number: 2 (lower is better)
Translates to: SPVNYPRNKVGASEQPCLKFSHL*PPPLEM
Trigger: CATTTCTAATGGAGGGGGCCAGAGATGGGAAAATTT...TAAGCACGGCTGCTCACTGGCCCCCACTTTGTTTCTTGGGTAATTCACAGGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
3UTR-3UTR TCA 90 bp GGCCACTTGGGTACCTTTCAGTGCAGACTGCTTCAGGCCAGAAAACCTCACTCCTGCACATATGTACAATaGGTTTACCAGCCCATAAAT +
Preference number: 2 (lower is better)
Translates to: GHLGTFQCRLLQARKPHSCTYVQ*VYQPIN
Trigger: ATTTATGGGCTGGTAAACTCATTGTACATATGTGCA...GGAGTGAGGTTTTCTGGCCTGAAGCAGTCTGCACTGAAAGGTACCCAAGTGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
3UTR-3UTR TCA 90 bp GACTCCATAGCTCATGCACCCCAATTACAGCAGGTGTCGGGCTGGCATAAAGGCTGCACATATGTACAATaGGTTTACCAGCCCATAAAT +
Preference number: 2 (lower is better)
Translates to: DSIAHAPQLQQVSGWHKGCTYVQ*VYQPIN
Trigger: ATTTATGGGCTGGTAAACTCATTGTACATATGTGCA...GCCTTTATGCCAGCCCGACACCTGCTGTAATTGGGGTGCATGAGCTATGGAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
3UTR-3UTR GCA 90 bp AATCCCAAGCTGGCTCAAGAGCCAGTGGTTAGGGAAGAAGAAGGTCAAGTGGACCTGAAGCTTCAGAGCTaGTGCCTATATGCTATAATG +
Preference number: 2 (lower is better)
Translates to: NPKLAQEPVVREEEGQVDLKLQS*CLYAIM
Trigger: CATTATAGCATATAGGCAGCAGCTCTGAAGCTTCAG...GTCCACTTGACCTTCTTCTTCCCTAACCACTGGCTCTTGAGCCAGCTTGGGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
3UTR-3UTR GCA 90 bp ATAGCTCATGCACCCCAATTACAGCAGGTGTCGGGCTGGCATAAAGGCTTCTTAGAGCGTTCGCCTCTTTaGATCTTCTTCTCTAAGTCA +
Preference number: 2 (lower is better)
Translates to: IAHAPQLQQVSGWHKGFLERSPL*IFFSKS
Trigger: TGACTTAGAGAAGAAGATGCAAAGAGGCGAACGCTC...TAAGAAGCCTTTATGCCAGCCCGACACCTGCTGTAATTGGGGTGCATGAGCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
3UTR-3UTR CCA 90 bp TGTACTATTGGAAGCCAGATGGCCAGGTATTGGCAATGGCCAGGGAAATCCCAACATGAGTTTGTGCTTTaGGAAGAATGCAGAGGGCTA +
Preference number: 2 (lower is better)
Translates to: CTIGSQMARYWQWPGKSQHEFVL*EECRGL
Trigger: TAGCCCTCTGCATTCTTCCCAAAGCACAAACTCATG...TTGGGATTTCCCTGGCCATTGCCAATACCTGGCCATCTGGCTTCCAATAGTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
3UTR-3UTR CCA 90 bp GTCCCATATCCACAACCCACTCACAGGCTTCAAGCAGCAGGACCTTGCCATATTTTTATGGGCTGTGAATaGTACCATGAGGGTTTCTCA +
Preference number: 2 (lower is better)
Translates to: VPYPQPTHRLQAAGPCHIFMGCE*YHEGFS
Trigger: TGAGAAACCCTCATGGTACCATTCACAGCCCATAAA...AATATGGCAAGGTCCTGCTGCTTGAAGCCTGTGAGTGGGTTGTGGATATGGGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
3UTR-3UTR CCA 90 bp AGCAGGTGTCGGGCTGGCATAAAGGCTTCTTACCAGGATTCCAGTTTATCCTTCAATCCTAACCTGGTCTaGGAAGGGGCATCACAAATA +
Preference number: 2 (lower is better)
Translates to: SRCRAGIKASYQDSSLSFNPNLV*EGASQI
Trigger: TATTTGTGATGCCCCTTCCCAGACCAGGTTAGGATT...GAAGGATAAACTGGAATCCTGGTAAGAAGCCTTTATGCCAGCCCGACACCTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
3UTR-3UTR TCA 90 bp CCAACAGCCACGACATTCAGCAATCTCAGTGTGACAAACAACACATCTGTAGCGGTGTGTACAAGGGTCTaGGAGTATATGACTGGCTAT +
Preference number: 2 (lower is better)
Translates to: PTATTFSNLSVTNNTSVAVCTRV*EYMTGY
Trigger: ATAGCCAGTCATATACTCTCAGACCCTTGTACACAC...CGCTACAGATGTGTTGTTTGTCACACTGAGATTGCTGAATGTCGTGGCTGTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
3UTR-3UTR GCA 90 bp TGTACTATTGGAAGCCAGATGGCCAGGTATTGGCAATGGCCAGGGAAATCCCAACTGAAGCTTCAGAGCTaGTGCCTATATGCTATAATG +
Preference number: 2 (lower is better)
Translates to: CTIGSQMARYWQWPGKSQLKLQS*CLYAIM
Trigger: CATTATAGCATATAGGCAGCAGCTCTGAAGCTTCAG...TTGGGATTTCCCTGGCCATTGCCAATACCTGGCCATCTGGCTTCCAATAGTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
3UTR-3UTR CCA 90 bp GTGTCGGGCTGGCATAAAGGCTTCTTACCAGGATTCCAGTTTATCCTTCTCAATTATCATTTCTTGCTCTaGGCGAGCGTTCGCCTCTTT +
Preference number: 2 (lower is better)
Translates to: VSGWHKGFLPGFQFILLNYHFLL*ASVRLF
Trigger: AAAGAGGCGAACGCTCGCCCAGAGCAAGAAATGATA...ATTGAGAAGGATAAACTGGAATCCTGGTAAGAAGCCTTTATGCCAGCCCGACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
3UTR-3UTR TCA 90 bp GTGTCGGGCTGGCATAAAGGCTTCTTACCAGGATTCCAGTTTATCCTTCTCAATTGTGTTTCCCCGGACTaGACAAGAAATTTTCCCATC +
Preference number: 2 (lower is better)
Translates to: VSGWHKGFLPGFQFILLNCVSPD*TRNFPI
Trigger: GATGGGAAAATTTCTTGTTCAGTCCGGGGAAACACA...ATTGAGAAGGATAAACTGGAATCCTGGTAAGAAGCCTTTATGCCAGCCCGACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
3UTR-3UTR GCA 90 bp AGTCACCAGAGTCTGGAAGTTCTTCGCTTGAACTTGAGTAGCCACTGTACTATTGGATTAATGGGTTTCTaGTTCTCCCCCACATCAGAG +
Preference number: 2 (lower is better)
Translates to: SHQSLEVLRLNLSSHCTIGLMGF*FSPTSE
Trigger: CTCTGATGTGGGGGAGAAGCAGAAACCCATTAATCC...AATAGTACAGTGGCTACTCAAGTTCAAGCGAAGAACTTCCAGACTCTGGTGACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
3UTR-3UTR GCA 90 bp TCAACTCCTTGGGTCATTTTCTTGGGGCTCATTCACTCTAGCTCTAGAATGAAGACCAACACAACCTCATaGTGTGGTGTGTACAAGGGT +
Preference number: 2 (lower is better)
Translates to: STPWVIFLGLIHSSSRMKTNTTS*CGVYKG
Trigger: ACCCTTGTACACACCACAGCATGAGGTTGTGTTGGT...CTTCATTCTAGAGCTAGAGTGAATGAGCCCCAAGAAAATGACCCAAGGAGTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
3UTR-3UTR CCA 90 bp AATCCCAAGCTGGCTCAAGAGCCAGTGGTTAGGGAAGAAGAAGGTCAAGTGGACCTTAGCAGTGTCTTATaGTTACAATCTACTCTTCTG +
Preference number: 2 (lower is better)
Translates to: NPKLAQEPVVREEEGQVDLSSVL*LQSTLL
Trigger: CAGAAGAGTAGATTGTAACCATAAGACACTGCTAAG...GTCCACTTGACCTTCTTCTTCCCTAACCACTGGCTCTTGAGCCAGCTTGGGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
3UTR-3UTR CCA 90 bp GACAGTACTGGGAATTCCCCTGTGAATTACCCAAGAAACAAAGTGGGGGCCAGTCTGAGAGTATATGACTaGCTATCATTTCTTGCTCTG +
Preference number: 2 (lower is better)
Translates to: DSTGNSPVNYPRNKVGASLRVYD*LSFLAL
Trigger: CAGAGCAAGAAATGATAGCCAGTCATATACTCTCAG...ACTGGCCCCCACTTTGTTTCTTGGGTAATTCACAGGGGAATTCCCAGTACTGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
3UTR-3UTR CCA 90 bp TTCTCATCTCTAACAAAAATGCCACACATACATGTAGTTGTGAGAGGCAAAGTCCGTGCTGAGCATGACTaGGGCTCCTCAGACAGATCT +
Preference number: 2 (lower is better)
Translates to: FSSLTKMPHIHVVVRGKVRAEHD*GSSDRS
Trigger: AGATCTGTCTGAGGAGCCCCAGTCATGCTCAGCACG...GACTTTGCCTCTCACAACTACATGTATGTGTGGCATTTTTGTTAGAGATGAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
3UTR CAA 90 bp TTTTGTGGTGATTGTGAGACAAACACAGTCCAAACAATAGACTTCTaGTCCTCCCCCTCCCAACAACTATCTGACTCCATAGCTCATGCA +
Preference number: 2 (lower is better)
Translates to: FCGDCETNTVQTIDF*SSPSQQLSDSIAHA
Trigger: TGCATGAGCTATGGAGTCAGATAGTTGTTGGGAGGGGGAGGACAAGAAGTCTATTGTTTGGACTGTGTTTGTCTCACAATCACCACAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
3UTR-3UTR CCA 90 bp ACACTTCAGTCTCTTTCCTGTATAACCTTGGTCAATAGTAAGAGCTTATCGCAACAGATGGCCAGGTATTaGCAATGGCCAGGGAAATCC +
Preference number: 2 (lower is better)
Translates to: TLQSLSCITLVNSKSLSQQMARY*QWPGKS
Trigger: GGATTTCCCTGGCCATTGCCAATACCTGGCCATCTG...TTGCGATAAGCTCTTACTATTGACCAAGGTTATACAGGAAAGAGACTGAAGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
3UTR-3UTR TCA 90 bp CCAACAGCCACGACATTCAGCAATCTCAGTGTGACAAACAACACATCTGTAGCGAAGACACACCCCATTTaGTCTTACAAAACAGTAAAG +
Preference number: 2 (lower is better)
Translates to: PTATTFSNLSVTNNTSVAKTHPI*SYKTVK
Trigger: CTTTACTGTTTTGTAAGATCAAATGGGGTGTGTCTT...CGCTACAGATGTGTTGTTTGTCACACTGAGATTGCTGAATGTCGTGGCTGTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
3UTR-3UTR GCA 90 bp AGTCACCAGAGTCTGGAAGTTCTTCGCTTGAACTTGAGTAGCCACTGTACTATTCTGAAGCTTCAGAGCTaGTGCCTATATGCTATAATG +
Preference number: 2 (lower is better)
Translates to: SHQSLEVLRLNLSSHCTILKLQS*CLYAIM
Trigger: CATTATAGCATATAGGCAGCAGCTCTGAAGCTTCAG...AATAGTACAGTGGCTACTCAAGTTCAAGCGAAGAACTTCCAGACTCTGGTGACT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
3UTR-3UTR GCA 90 bp TTCTCATCTCTAACAAAAATGCCACACATACATGTAGTTGTGAGAGGCAAAGTCTGTACATACAGCTCATaGACACACATCAGCACCCAC +
Preference number: 2 (lower is better)
Translates to: FSSLTKMPHIHVVVRGKVCTYSS*THISTH
Trigger: GTGGGTGCTGATGTGTGTGCATGAGCTGTATGTACA...GACTTTGCCTCTCACAACTACATGTATGTGTGGCATTTTTGTTAGAGATGAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
3UTR CAA 90 bp GCTTCAGAGCTGCTGCCTATATGCTATAATGCAACAAAAATAGCCTaGAGGGCCAAATATAAATATGATTTCAAGATCTACCACAGTCCT +
Preference number: 2 (lower is better)
Translates to: ASELLPICYNATKIA*RAKYKYDFKIYHSP
Trigger: AGGACTGTGGTAGATCTTGAAATCATATTTATATTTGGCCCTCAAGGCTATTTTTGTTGCATTATAGCATATAGGCAGCAGCTCTGAAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
3UTR-3UTR GCA 90 bp TTCCTAATAGTGCAAATGAATCTGATACCTCTTAAAATGGTGAGAGGTCATACAAGATTCCCTAACATATaGACTAGTGGTTGGCTCTGG +
Preference number: 2 (lower is better)
Translates to: FLIVQMNLIPLKMVRGHTRFPNI*TSGWLW
Trigger: CCAGAGCCAACCACTAGTGCATATGTTAGGGAATCT...TGTATGACCTCTCACCATTTTAAGAGGTATCAGATTCATTTGCACTATTAGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
3UTR-3UTR TCA 90 bp ACACTTCAGTCTCTTTCCTGTATAACCTTGGTCAATAGTAAGAGCTTATCGCAAGGCTATAAAAATTCATaGGGCTTATTTAAGCCTTGC +
Preference number: 2 (lower is better)
Translates to: TLQSLSCITLVNSKSLSQGYKNS*GLFKPC
Trigger: GCAAGGCTTAAATAAGCCTCATGAATTTTTATAGCC...TTGCGATAAGCTCTTACTATTGACCAAGGTTATACAGGAAAGAGACTGAAGTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
3UTR-3UTR GCA 90 bp TTCCTAATAGTGCAAATGAATCTGATACCTCTTAAAATGGTGAGAGGTCATACACTGAAGCTTCAGAGCTaGTGCCTATATGCTATAATG +
Preference number: 2 (lower is better)
Translates to: FLIVQMNLIPLKMVRGHTLKLQS*CLYAIM
Trigger: CATTATAGCATATAGGCAGCAGCTCTGAAGCTTCAG...TGTATGACCTCTCACCATTTTAAGAGGTATCAGATTCATTTGCACTATTAGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
3UTR-3UTR GCA 90 bp ATAGTGCAAATGAATCTGATACCTCTTAAAATGGTGAGAGGTCATACACTTACTGAACCTTCTATTATCTaGAGCAACAAGCTGATCTGG +
Preference number: 2 (lower is better)
Translates to: IVQMNLIPLKMVRGHTLTEPSII*SNKLIW
Trigger: CCAGATCAGCTTGTTGCTGCAGATAATAGAAGGTTC...AGTAAGTGTATGACCTCTCACCATTTTAAGAGGTATCAGATTCATTTGCACTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
3UTR-3UTR TCA 90 bp ATAGTGCAAATGAATCTGATACCTCTTAAAATGGTGAGAGGTCATACACTTACTGGCTATAAAAATTCATaGGGCTTATTTAAGCCTTGC +
Preference number: 2 (lower is better)
Translates to: IVQMNLIPLKMVRGHTLTGYKNS*GLFKPC
Trigger: GCAAGGCTTAAATAAGCCTCATGAATTTTTATAGCC...AGTAAGTGTATGACCTCTCACCATTTTAAGAGGTATCAGATTCATTTGCACTAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
3UTR-3UTR GCA 90 bp ATAGTGCAAATGAATCTGATACCTCTTAAAATGGTGAGAGGTCATACACTTACTGACTTGAAAGTTAACTaGAGAACTCCTCAAAGCATT +
Preference number: 2 (lower is better)
Translates to: IVQMNLIPLKMVRGHTLTDLKVN*RTPQSI
Trigger: AATGCTTTGAGGAGTTCTGCAGTTAACTTTCAAGTC...AGTAAGTGTATGACCTCTCACCATTTTAAGAGGTATCAGATTCATTTGCACTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
3UTR-3UTR CCA 90 bp TTCCTAATAGTGCAAATGAATCTGATACCTCTTAAAATGGTGAGAGGTCATACAATGTCGTACATACAATaGGGATGTATCAGATCTACT +
Preference number: 2 (lower is better)
Translates to: FLIVQMNLIPLKMVRGHTMSYIQ*GCIRST
Trigger: AGTAGATCTGATACATCCCCATTGTATGTACGACAT...TGTATGACCTCTCACCATTTTAAGAGGTATCAGATTCATTTGCACTATTAGGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
3UTR GCA 72 bp GGAGCACAAAAGCCTCACAAAACTGCTCCAGGATCCTaGCTCTTCCAGGGCCGGAATCCGCGGCCTTCCCAG +
Preference number: 3 (lower is better)
Translates to: GAQKPHKTAPGS*LFQGRNPRPSQ
Trigger: CTGGGAAGGCCGCGGATTCCGGCCCTGGAAGAGGCAGGATCCTGGAGCAGTTTTGTGAGGCTTTTGTGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
3UTR-3UTR CAA 90 bp GCTGTCAGCCAGCGTCCGGATGTCCACATAGCCCAACTCGGGAGGCTCAGAGCCGACACGATGTACTTCTaGGGCCTGATGAACATGAGG +
Preference number: 3 (lower is better)
Translates to: AVSQRPDVHIAQLGRLRADTMYF*GLMNMR
Trigger: CCTCATGTTCATCAGGCCCAAGAAGTACATCGTGTC...GGCTCTGAGCCTCCCGAGTTGGGCTATGTGGACATCCGGACGCTGGCTGACAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511925.5
3UTR TCA 72 bp GTAGCAGGAAGGGACGTCCAGACGGGACTCCAGAGGTaGTGGAAAGTGGGGGAGGCACAAAAGCAGCAAACA +
Preference number: 3 (lower is better)
Translates to: VAGRDVQTGLQR*WKVGEAQKQQT
Trigger: TGTTTGCTGCTTTTGTGCCTCCCCCACTTTCCATCACCTCTGGAGTCCCGTCTGGACGTCCCTTCCTGCTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
3UTR CCA 72 bp GGAATCCGCGGCCTTCCCAGGAATCCTAACCTGGTCTaGGAAGGGGCATCACAAATAAGCTGGCACTCAGTC +
Preference number: 3 (lower is better)
Translates to: GIRGLPRNPNLV*EGASQISWHSV
Trigger: GACTGAGTGCCAGCTTATTTGTGATGCCCCTTCCCAGACCAGGTTAGGATTCCTGGGAAGGCCGCGGATTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
3UTR-3UTR CAA 90 bp AAGGAAATGCCAGCAGCTGAGGCTCGGCAGCCAACAGCCACGACATTCAGCAATACTGGCTATCATTTCTaGCTCTGGGCGAGCGTTCGC +
Preference number: 3 (lower is better)
Translates to: KEMPAAEARQPTATTFSNTGYHF*LWASVR
Trigger: GCGAACGCTCGCCCAGAGCAAGAAATGATAGCCAGT...ATTGCTGAATGTCGTGGCTGTTGGCTGCCGAGCCTCAGCTGCTGGCATTTCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
3UTR TCA 72 bp CATTGGTCAGTTCCAGCCATGCAGCATCCATGTCATTaGGGTCATAGCGACACACGCTGTCAGCCAGCGTCC +
Preference number: 3 (lower is better)
Translates to: HWSVPAMQHPCH*GHSDTRCQPAS
Trigger: GGACGCTGGCTGACAGCGTGTGTCGCTATGACCTCAATGACATGGATGCTGCATGGCTGGAACTGACCAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511925.5
3UTR GCA 72 bp TACCCAAGAAACAAAGTGGGGGCCAGTGAGCAGCCGTaGTTAGCTTCCTTCATAAGCCCATCACCAGCACCT +
Preference number: 3 (lower is better)
Translates to: YPRNKVGASEQP*LASFISPSPAP
Trigger: AGGTGCTGGTGATGGGCTTATGAAGGAAGCTAAGCACGGCTGCTCACTGGCCCCCACTTTGTTTCTTGGGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
3UTR GCA 72 bp CCCTACACTGTTTCAGGCCACTTGGGTACCTTTCAGTaGAGACTGCTTCAGGCCAGAAAACCTCACTCCCAC +
Preference number: 3 (lower is better)
Translates to: PYTVSGHLGTFQ*RLLQARKPHSH
Trigger: GTGGGAGTGAGGTTTTCTGGCCTGAAGCAGTCTGCACTGAAAGGTACCCAAGTGGCCTGAAACAGTGTAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
3UTR-3UTR CAA 90 bp GGCCACTTGGGTACCTTTCAGTGCAGACTGCTTCAGGCCAGAAAACCTCACTCCCCTTGGGTCATTTTCTaGGGGCTCATTCACTCTAGC +
Preference number: 3 (lower is better)
Translates to: GHLGTFQCRLLQARKPHSPWVIF*GLIHSS
Trigger: GCTAGAGTGAATGAGCCCCAAGAAAATGACCCAAGG...GGAGTGAGGTTTTCTGGCCTGAAGCAGTCTGCACTGAAAGGTACCCAAGTGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
3UTR TCA 72 bp CCCTGTGAATTACCCAAGAAACAAAGTGGGGGCCAGTaGGCAGCCGTGCTTAGCTTCCTTCATAAGCCCATC +
Preference number: 3 (lower is better)
Translates to: PCELPKKQSGGQ*AAVLSFLHKPI
Trigger: GATGGGCTTATGAAGGAAGCTAAGCACGGCTGCTCACTGGCCCCCACTTTGTTTCTTGGGTAATTCACAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
3UTR GCA 72 bp CTGTTTCAGGCCACTTGGGTACCTTTCAGTGCAGACTaGTTCAGGCCAGAAAACCTCACTCCCACCTCTTTC +
Preference number: 3 (lower is better)
Translates to: LFQATWVPFSAD*FRPENLTPTSF
Trigger: GAAAGAGGTGGGAGTGAGGTTTTCTGGCCTGAAGCAGTCTGCACTGAAAGGTACCCAAGTGGCCTGAAACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
3UTR-3UTR CAA 90 bp TCCTCAGACAGATCTGACACCCCTGTCCACCAGGAATCCCACCCATACCCGCACCACTCAGTAGCAGTTTaGCACATATGTACAATGAGT +
Preference number: 3 (lower is better)
Translates to: SSDRSDTPVHQESHPYPHHSVAV*HICTMS
Trigger: ACTCATTGTACATATGTGCAAAACTGCTACTGAGTG...GTGCGGGTATGGGTGGGATTCCTGGTGGACAGGGGTGTCAGATCTGTCTGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
3UTR-3UTR CAA 90 bp ATGCACCCCAATTACAGCAGGTGTCGGGCTGGCATAAAGGCTTCTTACCAGGATACTGTTTCAGGCCACTaGGGTACCTTTCAGTGCAGA +
Preference number: 3 (lower is better)
Translates to: MHPNYSRCRAGIKASYQDTVSGH*GTFQCR
Trigger: TCTGCACTGAAAGGTACCCAAGTGGCCTGAAACAGT...ATCCTGGTAAGAAGCCTTTATGCCAGCCCGACACCTGCTGTAATTGGGGTGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
3UTR CCA 72 bp TGCTGTGGTGTGTACAAGGGTCTGAGAGTATATGACTaGCTATCATTTCTTGCTCTGGGCGAGCGTTCGCCT +
Preference number: 3 (lower is better)
Translates to: CCGVYKGLRVYD*LSFLALGERSP
Trigger: AGGCGAACGCTCGCCCAGAGCAAGAAATGATAGCCAGTCATATACTCTCAGACCCTTGTACACACCACAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
3UTR TCA 72 bp CTCATGCTGTGGTGTGTACAAGGGTCTGAGAGTATATaGCTGGCTATCATTTCTTGCTCTGGGCGAGCGTTC +
Preference number: 3 (lower is better)
Translates to: LMLWCVQGSESI*LAIISCSGRAF
Trigger: GAACGCTCGCCCAGAGCAAGAAATGATAGCCAGTCATATACTCTCAGACCCTTGTACACACCACAGCATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
3UTR GCA 72 bp CCACAACCCACTCACAGGCTTCAAGCAGCAGGACCTTaGCATATTACCCTAAATCTCCATATTGCAGCAGCT +
Preference number: 3 (lower is better)
Translates to: PQPTHRLQAAGP*HITLNLHIAAA
Trigger: AGCTGCTGCAATATGGAGATTTAGGGTAATATGGCAAGGTCCTGCTGCTTGAAGCCTGTGAGTGGGTTGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
3UTR-3UTR CAA 90 bp CAGGGAAATCCCAAGCTGGCTCAAGAGCCAGTGGTTAGGGAAGAAGAAGGTCAACAGGTAACCATGAGTTaGTGCTTTGGGAAGAATGCA +
Preference number: 3 (lower is better)
Translates to: QGNPKLAQEPVVREEEGQQVTMS*CFGKNA
Trigger: TGCATTCTTCCCAAAGCACAAACTCATGGTTACCTG...TTGACCTTCTTCTTCCCTAACCACTGGCTCTTGAGCCAGCTTGGGATTTCCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
3UTR GCA 72 bp AGCAGGACCTTGCCATATTACCCTAAATCTCCATATTaGAGCAGCTCTACCCTGTCCCCTCAGCTTCTTCAA +
Preference number: 3 (lower is better)
Translates to: SRTLPYYPKSPY*SSSTLSPQLLQ
Trigger: TTGAAGAAGCTGAGGGGACAGGGTAGAGCTGCTGCAATATGGAGATTTAGGGTAATATGGCAAGGTCCTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
3UTR CCA 72 bp ATAGCTCATGCACCCCAATTACAGCAGGTGTCGGGCTaGCATAAAGGCTTCTTACCAGGATTCCAGTTTATC +
Preference number: 3 (lower is better)
Translates to: IAHAPQLQQVSG*HKGFLPGFQFI
Trigger: GATAAACTGGAATCCTGGTAAGAAGCCTTTATGCCAGCCCGACACCTGCTGTAATTGGGGTGCATGAGCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
3UTR CCA 72 bp AGCATCGCTGCTCAAATTCCTCTAGGACCCTCTCCATaGTGTATTCATCTAGTTCAGGCATTCCCATCTCCT +
Preference number: 3 (lower is better)
Translates to: SIAAQIPLGPSP*CIHLVQAFPSP
Trigger: AGGAGATGGGAATGCCTGAACTAGATGAATACACCATGGAGAGGGTCCTAGAGGAATTTGAGCAGCGATGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511925.5
3UTR-3UTR CAA 90 bp GACTCCATAGCTCATGCACCCCAATTACAGCAGGTGTCGGGCTGGCATAAAGGCGAAGACACACCCCATTaGATCTTACAAAACAGTAAA +
Preference number: 3 (lower is better)
Translates to: DSIAHAPQLQQVSGWHKGEDTPH*ILQNSK
Trigger: TTTACTGTTTTGTAAGATCAAATGGGGTGTGTCTTC...GCCTTTATGCCAGCCCGACACCTGCTGTAATTGGGGTGCATGAGCTATGGAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
3UTR-3UTR CAA 90 bp GAGACAAACACAGTCCAAACAATAGACTTCTTGTCCTCCCCCTCCCAACAACTAACTGTTTCAGGCCACTaGGGTACCTTTCAGTGCAGA +
Preference number: 3 (lower is better)
Translates to: ETNTVQTIDFLSSPSQQLTVSGH*GTFQCR
Trigger: TCTGCACTGAAAGGTACCCAAGTGGCCTGAAACAGT...TAGTTGTTGGGAGGGGGAGGACAAGAAGTCTATTGTTTGGACTGTGTTTGTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
3UTR-3UTR CAA 90 bp GAGAGGCAAAGTCTTCTTTACACTCACCACCAGGGGGCGTATGGGAGCACAAAACACTCAGTAGCAGTTTaGCACATATGTACAATGAGT +
Preference number: 3 (lower is better)
Translates to: ERQSLLYTHHQGAYGSTKHSVAV*HICTMS
Trigger: ACTCATTGTACATATGTGCAAAACTGCTACTGAGTG...TTTTGTGCTCCCATACGCCCCCTGGTGGTGAGTGTAAAGAAGACTTTGCCTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
3UTR-3UTR CAA 90 bp TCCCCTGTGAATTACCCAAGAAACAAAGTGGGGGCCAGTGAGCAGCCGTGCTTAGAAGACACACCCCATTaGATCTTACAAAACAGTAAA +
Preference number: 3 (lower is better)
Translates to: SPVNYPRNKVGASEQPCLEDTPH*ILQNSK
Trigger: TTTACTGTTTTGTAAGATCAAATGGGGTGTGTCTTC...TAAGCACGGCTGCTCACTGGCCCCCACTTTGTTTCTTGGGTAATTCACAGGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
3UTR TCA 72 bp CCAACACAACCTCATGCTGTGGTGTGTACAAGGGTCTaGGAGTATATGACTGGCTATCATTTCTTGCTCTGG +
Preference number: 3 (lower is better)
Translates to: PTQPHAVVCTRV*EYMTGYHFLLW
Trigger: CCAGAGCAAGAAATGATAGCCAGTCATATACTCTCAGACCCTTGTACACACCACAGCATGAGGTTGTGTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
3UTR GCA 72 bp ATCCATTCATGTTGGAAGCCCAGATTCCCTAACATATaGACTAGTGGTTGGCTCTGGGAAGTAACAGTCACC +
Preference number: 3 (lower is better)
Translates to: IHSCWKPRFPNI*TSGWLWEVTVT
Trigger: GGTGACTGTTACTTCCCAGAGCCAACCACTAGTGCATATGTTAGGGAATCTGGGCTTCCAACATGAATGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
3UTR-3UTR CAA 90 bp AGTCACCAGAGTCTGGAAGTTCTTCGCTTGAACTTGAGTAGCCACTGTACTATTCAGGTAACCATGAGTTaGTGCTTTGGGAAGAATGCA +
Preference number: 3 (lower is better)
Translates to: SHQSLEVLRLNLSSHCTIQVTMS*CFGKNA
Trigger: TGCATTCTTCCCAAAGCACAAACTCATGGTTACCTG...AATAGTACAGTGGCTACTCAAGTTCAAGCGAAGAACTTCCAGACTCTGGTGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
3UTR-3UTR CAA 90 bp TTCCTAATAGTGCAAATGAATCTGATACCTCTTAAAATGGTGAGAGGTCATACAGTAGCCACTGTACTATaGGAAGCCAGATGGCCAGGT +
Preference number: 3 (lower is better)
Translates to: FLIVQMNLIPLKMVRGHTVATVL*EARWPG
Trigger: ACCTGGCCATCTGGCTTCCAATAGTACAGTGGCTAC...TGTATGACCTCTCACCATTTTAAGAGGTATCAGATTCATTTGCACTATTAGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
3UTR-3UTR CAA 90 bp ACACTTCAGTCTCTTTCCTGTATAACCTTGGTCAATAGTAAGAGCTTATCGCAACAGGTAACCATGAGTTaGTGCTTTGGGAAGAATGCA +
Preference number: 3 (lower is better)
Translates to: TLQSLSCITLVNSKSLSQQVTMS*CFGKNA
Trigger: TGCATTCTTCCCAAAGCACAAACTCATGGTTACCTG...TTGCGATAAGCTCTTACTATTGACCAAGGTTATACAGGAAAGAGACTGAAGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
3UTR-3UTR CAA 90 bp ATAGTGCAAATGAATCTGATACCTCTTAAAATGGTGAGAGGTCATACACTTACTCTGGAAGTTCTTCGCTaGAACTTGAGTAGCCACTGT +
Preference number: 3 (lower is better)
Translates to: IVQMNLIPLKMVRGHTLTLEVLR*NLSSHC
Trigger: ACAGTGGCTACTCAAGTTCAAGCGAAGAACTTCCAG...AGTAAGTGTATGACCTCTCACCATTTTAAGAGGTATCAGATTCATTTGCACTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
3UTR-3UTR CAA 90 bp ATAGTGCAAATGAATCTGATACCTCTTAAAATGGTGAGAGGTCATACACTTACTTCAAGCAGCAGGACCTaGCCATATTACCCTAAATCT +
Preference number: 3 (lower is better)
Translates to: IVQMNLIPLKMVRGHTLTSSSRT*PYYPKS
Trigger: AGATTTAGGGTAATATGGCAAGGTCCTGCTGCTTGA...AGTAAGTGTATGACCTCTCACCATTTTAAGAGGTATCAGATTCATTTGCACTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
3UTR GCA 72 bp GGGCTTGTTCCAAAGGCCCATAATTCTGTATCTCATTaGTATTTAAACGTTCCTTCCTTAAGTTTGATTCAC +
Preference number: 3 (lower is better)
Translates to: GLVPKAHNSVSH*YLNVPSLSLIH
Trigger: GTGAATCAAACTTAAGGAAGGAACGTTTAAATAGCAATGAGATACAGAATTATGGGCCTTTGGAACAAGCCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
3UTR-3UTR CAA 90 bp TTCCTAATAGTGCAAATGAATCTGATACCTCTTAAAATGGTGAGAGGTCATACAGTTCCTTCCTTAAGTTaGATTCACAACCACATTGAA +
Preference number: 3 (lower is better)
Translates to: FLIVQMNLIPLKMVRGHTVPSLS*IHNHIE
Trigger: TTCAATGTGGTTGTGAATCAAACTTAAGGAAGGAAC...TGTATGACCTCTCACCATTTTAAGAGGTATCAGATTCATTTGCACTATTAGGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp TCCTCAGACAGATCTGACACCCCTGTCCACCAGGAATCCCACCCATACCCGCACCAGCAGGCAGCCTGCTaGGGAGGGGTTCGGCCGAGG +
Preference number: 4 (lower is better)
Translates to: SSDRSDTPVHQESHPYPHQQAAC*GGVRPR
Trigger: CCTCGGCCGAACCCCTCCGCAGCAGGCTGCCTGCTG...GTGCGGGTATGGGTGGGATTCCTGGTGGACAGGGGTGTCAGATCTGTCTGAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511647.5
CDS-3UTR GCA 90 bp CCACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCCAGCAGGCAGCCTGCTaGGGAGGGGTTCGGCCGAGG +
Preference number: 4 (lower is better)
Translates to: PHQSSPLANPMTSPKGFRQQAAC*GGVRPR
Trigger: CCTCGGCCGAACCCCTCCGCAGCAGGCTGCCTGCTG...GCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226319.11
ENST00000452328.6
CDS-3UTR GCA 90 bp ACAAAACTGCTCCAGGATCCTGCCTCTTCCAGGGCCGGAATCCGCGGCCTTCCCGCCTCCTCCCGGTTCTaGTCAAGGCTGGCAAAGGGC +
Preference number: 4 (lower is better)
Translates to: TKLLQDPASSRAGIRGLPASSRF*SRLAKG
Trigger: GCCCTTTGCCAGCCTTGAGCAGAACCGGGAGGAGGC...GGGAAGGCCGCGGATTCCGGCCCTGGAAGAGGCAGGATCCTGGAGCAGTTTTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR GCA 90 bp GGGACGTCCAGACGGGACTCCAGAGGTGATGGAAAGTGGGGGAGGCACAAAAGCGCCTCCTCCCGGTTCTaGTCAAGGCTGGCAAAGGGC +
Preference number: 4 (lower is better)
Translates to: GTSRRDSRGDGKWGRHKSASSRF*SRLAKG
Trigger: GCCCTTTGCCAGCCTTGAGCAGAACCGGGAGGAGGC...GCTTTTGTGCCTCCCCCACTTTCCATCACCTCTGGAGTCCCGTCTGGACGTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR CCA 90 bp ACTGCTCCAGGATCCTGCCTCTTCCAGGGCCGGAATCCGCGGCCTTCCCAGGAACCACCAGGGGGCGTATaGGAGCACAAAAGCCTCACA +
Preference number: 4 (lower is better)
Translates to: TAPGSCLFQGRNPRPSQEPPGGV*EHKSLT
Trigger: TGTGAGGCTTTTGTGCTCCCATACGCCCCCTGGTGG...TTCCTGGGAAGGCCGCGGATTCCGGCCCTGGAAGAGGCAGGATCCTGGAGCAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR TCA 90 bp ACAAAACTGCTCCAGGATCCTGCCTCTTCCAGGGCCGGAATCCGCGGCCTTCCCGCTGCTGGGAATGTGTaGCACCTTGGTGATGGGCTC +
Preference number: 4 (lower is better)
Translates to: TKLLQDPASSRAGIRGLPAAGNV*HLGDGL
Trigger: GAGCCCATCACCAAGGTGTCACACATTCCCAGCAGC...GGGAAGGCCGCGGATTCCGGCCCTGGAAGAGGCAGGATCCTGGAGCAGTTTTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR GCA 90 bp AAGGAAATGCCAGCAGCTGAGGCTCGGCAGCCAACAGCCACGACATTCAGCAATTCGCTCGCTCGGAGCTaGATGAGTTCGGGCCGCGGC +
Preference number: 4 (lower is better)
Translates to: KEMPAAEARQPTATTFSNSLARS*MSSGRG
Trigger: GCCGCGGCCCGAACTCATGCAGCTCCGAGCGAGCGA...ATTGCTGAATGTCGTGGCTGTTGGCTGCCGAGCCTCAGCTGCTGGCATTTCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511647.5
CDS-3UTR GCA 90 bp TCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCAGCAGGCAGCCTGCTaGGGAGGGGTTCGGCCGAGG +
Preference number: 4 (lower is better)
Translates to: SELSSSKPNDEPKGLPHHQQAAC*GGVRPR
Trigger: CCTCGGCCGAACCCCTCCGCAGCAGGCTGCCTGCTG...ATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226319.11
ENST00000452328.6
CDS-3UTR GCA 90 bp CCCCCACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCAAACAGCAGGCAGCCTaGTGCGGAGGGGTTCGGCCG +
Preference number: 4 (lower is better)
Translates to: PPHQSSPLANPMTSPKGFKQQAA*CGGVRP
Trigger: CGGCCGAACCCCTCCGCAGCAGGCTGCCTGCTGTTT...GAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGTGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000226319.11
ENST00000452328.6
CDS-3UTR GCA 90 bp CGCTGTCAGCCAGCGTCCGGATGTCCACATAGCCCAACTCGGGAGGCTCAGAGCCAGAATCCTCACTGCTaGTGGGAAGGCGACCTCGTT +
Preference number: 4 (lower is better)
Translates to: RCQPASGCPHSPTREAQSQNPHC*WEGDLV
Trigger: AACGAGGTCGCCTTCCCAGCAGCAGTGAGGATTCTG...GCTCTGAGCCTCCCGAGTTGGGCTATGTGGACATCCGGACGCTGGCTGACAGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511925.5
CDS-3UTR GCA 90 bp TCTCCCCCACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTCGTGGGCCTCTCCCTaGTGCTGCCGTTCCCCCTTC +
Preference number: 4 (lower is better)
Translates to: SPPHQSSPLANPMTSPKGSWASP*CCRSPF
Trigger: GAAGGGGGAACGGCAGCAGCAGGGAGAGGCCCACGA...GCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGTGGGGGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp CACGCTGTCAGCCAGCGTCCGGATGTCCACATAGCCCAACTCGGGAGGCTCAGAGGAGGGGAGAGAGGCTaGTATTTAAACGCCCGCGGA +
Preference number: 4 (lower is better)
Translates to: HAVSQRPDVHIAQLGRLRGGERG*YLNARG
Trigger: TCCGCGGGCGTTTAAATAGCAGCCTCTCTCCCCTCC...TCTGAGCCTCCCGAGTTGGGCTATGTGGACATCCGGACGCTGGCTGACAGCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511925.5
CDS-3UTR GCA 90 bp ACTGCTCCAGGATCCTGCCTCTTCCAGGGCCGGAATCCGCGGCCTTCCCAGGAAACCCACTGCCTGCTCTaGTCCATGACAGTACTGGGA +
Preference number: 4 (lower is better)
Translates to: TAPGSCLFQGRNPRPSQETHCLL*SMTVLG
Trigger: TCCCAGTACTGTCATGGAGCAGAGCAGGCAGTGGGT...TTCCTGGGAAGGCCGCGGATTCCGGCCCTGGAAGAGGCAGGATCCTGGAGCAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR CCA 90 bp ACAAAACTGCTCCAGGATCCTGCCTCTTCCAGGGCCGGAATCCGCGGCCTTCCCCCACCAGGGGGCGTATaGGAGCACAAAAGCCTCACA +
Preference number: 4 (lower is better)
Translates to: TKLLQDPASSRAGIRGLPPPGGV*EHKSLT
Trigger: TGTGAGGCTTTTGTGCTCCCATACGCCCCCTGGTGG...GGGAAGGCCGCGGATTCCGGCCCTGGAAGAGGCAGGATCCTGGAGCAGTTTTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR TCA 90 bp GCGACACACGCTGTCAGCCAGCGTCCGGATGTCCACATAGCCCAACTCGGGAGGCAGCATCCATGTCATTaGGGTCATAGCGACACACGC +
Preference number: 4 (lower is better)
Translates to: ATHAVSQRPDVHIAQLGRQHPCH*GHSDTR
Trigger: GCGTGTGTCGCTATGACCTCAATGACATGGATGCTG...CCTCCCGAGTTGGGCTATGTGGACATCCGGACGCTGGCTGACAGCGTGTGTCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511925.5
CDS-3UTR TCA 90 bp GAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTCCCTTGTGCCAGGTGCTaGCTGCCCCACTCCAGGGGA +
Preference number: 4 (lower is better)
Translates to: ELSSSKPNDEPKGLPHHLPCARC*LPHSRG
Trigger: TCCCCTGGAGTGGGGCAGTCAGCACCTGGCACAAGG...GAGATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR TCA 90 bp TCAGACAGATCTGACACCCCTGTCCACCAGGAATCCCACCCATACCCGCACACAGGAAATGCCAGCAGCTaGGGCTCGGCAGCCAACAGC +
Preference number: 4 (lower is better)
Translates to: SDRSDTPVHQESHPYPHTGNASS*GSAANS
Trigger: GCTGTTGGCTGCCGAGCCTCAGCTGCTGGCATTTCC...TGTGTGCGGGTATGGGTGGGATTCCTGGTGGACAGGGGTGTCAGATCTGTCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR TCA 90 bp TCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCGCGCTCCGCCACTTTaGGCAGCAGCCGCGTCCTCA +
Preference number: 4 (lower is better)
Translates to: SELSSSKPNDEPKGLPHHRAPPL*AAAASS
Trigger: TGAGGACGCGGCTGCTGCTCAAAGTGGCGGAGCGCG...ATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610919.4
CDS-3UTR GCA 90 bp GGGACGTCCAGACGGGACTCCAGAGGTGATGGAAAGTGGGGGAGGCACAAAAGCCGTCAGAATCCTCACTaGTGCTGGGAAGGCGACCTC +
Preference number: 4 (lower is better)
Translates to: GTSRRDSRGDGKWGRHKSRQNPH*CWEGDL
Trigger: GAGGTCGCCTTCCCAGCAGCAGTGAGGATTCTGACG...GCTTTTGTGCCTCCCCCACTTTCCATCACCTCTGGAGTCCCGTCTGGACGTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR GCA 90 bp GCGACACACGCTGTCAGCCAGCGTCCGGATGTCCACATAGCCCAACTCGGGAGGCAGGAGCTTCTCCTATaGTGGGATCGGGAATTCTGG +
Preference number: 4 (lower is better)
Translates to: ATHAVSQRPDVHIAQLGRQELLL*WDREFW
Trigger: CCAGAATTCCCGATCCCAGCATAGGAGAAGCTCCTG...CCTCCCGAGTTGGGCTATGTGGACATCCGGACGCTGGCTGACAGCGTGTGTCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511925.5
CDS-3UTR GCA 90 bp CCCACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGGCCTCCTCCCGGTTCTaGTCAAGGCTGGCAAAGGGC +
Preference number: 4 (lower is better)
Translates to: PTSELSSSKPNDEPKGLPASSRF*SRLAKG
Trigger: GCCCTTTGCCAGCCTTGAGCAGAACCGGGAGGAGGC...CGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp GAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTCCCACAGGCTGAGGGATaGTCCCCGGGCTCACAGGCA +
Preference number: 4 (lower is better)
Translates to: ELSSSKPNDEPKGLPHHLPQAEG*SPGSQA
Trigger: TGCCTGTGAGCCCGGGGACCATCCCTCAGCCTGTGG...GAGATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp GACTCCATAGCTCATGCACCCCAATTACAGCAGGTGTCGGGCTGGCATAAAGGCCCACAGGCTGAGGGATaGTCCCCGGGCTCACAGGCA +
Preference number: 4 (lower is better)
Translates to: DSIAHAPQLQQVSGWHKGPQAEG*SPGSQA
Trigger: TGCCTGTGAGCCCGGGGACCATCCCTCAGCCTGTGG...GCCTTTATGCCAGCCCGACACCTGCTGTAATTGGGGTGCATGAGCTATGGAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR CCA 90 bp CATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCCCACAGGCTGAGGGATaGTCCCCGGGCTCACAGGCA +
Preference number: 4 (lower is better)
Translates to: HQSSPLANPMTSPKGFRIPQAEG*SPGSQA
Trigger: TGCCTGTGAGCCCGGGGACCATCCCTCAGCCTGTGG...GATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR TCA 90 bp TCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCCTTGTGCCAGGTGCTaGCTGCCCCACTCCAGGGGA +
Preference number: 4 (lower is better)
Translates to: SELSSSKPNDEPKGLPHHPCARC*LPHSRG
Trigger: TCCCCTGGAGTGGGGCAGTCAGCACCTGGCACAAGG...ATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp CAGGGAAATCCCAAGCTGGCTCAAGAGCCAGTGGTTAGGGAAGAAGAAGGTCAATCGCTCGCTCGGAGCTaGATGAGTTCGGGCCGCGGC +
Preference number: 4 (lower is better)
Translates to: QGNPKLAQEPVVREEEGQSLARS*MSSGRG
Trigger: GCCGCGGCCCGAACTCATGCAGCTCCGAGCGAGCGA...TTGACCTTCTTCTTCCCTAACCACTGGCTCTTGAGCCAGCTTGGGATTTCCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000226319.11
CDS-3UTR GCA 90 bp GACTCCAGAGGTGATGGAAAGTGGGGGAGGCACAAAAGCAGCAAACAGCAGAAGAAACAGCAGGCAGCCTaGTGCGGAGGGGTTCGGCCG +
Preference number: 4 (lower is better)
Translates to: DSRGDGKWGRHKSSKQQKKQQAA*CGGVRP
Trigger: CGGCCGAACCCCTCCGCAGCAGGCTGCCTGCTGTTT...CTTCTGCTGTTTGCTGCTTTTGTGCCTCCCCCACTTTCCATCACCTCTGGAGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000511647.5
CDS-3UTR GCA 90 bp GCGACACACGCTGTCAGCCAGCGTCCGGATGTCCACATAGCCCAACTCGGGAGGGGTCAGTTCCAGCCATaGAGCATCCATGTCATTGAG +
Preference number: 4 (lower is better)
Translates to: ATHAVSQRPDVHIAQLGRGQFQP*SIHVIE
Trigger: CTCAATGACATGGATGCTGCATGGCTGGAACTGACC...CCTCCCGAGTTGGGCTATGTGGACATCCGGACGCTGGCTGACAGCGTGTGTCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511925.5
CDS-3UTR GCA 90 bp TCTCCCCCACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCCTAGCGCCCACCGGCTaGTGGGAATGTGTGACACCT +
Preference number: 4 (lower is better)
Translates to: SPPHQSSPLANPMTSPKGLAPTG*WECVTP
Trigger: AGGTGTCACACATTCCCAGCAGCCGGTGGGCGCTAG...GCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGTGGGGGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp CCCACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCTAGCGCCCACCGGCTaGTGGGAATGTGTGACACCT +
Preference number: 4 (lower is better)
Translates to: PTSELSSSKPNDEPKGLPLAPTG*WECVTP
Trigger: AGGTGTCACACATTCCCAGCAGCCGGTGGGCGCTAG...CGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp CCACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCTCTCATTGCAGAGGCTaGACACTAGCGCCCACCGGC +
Preference number: 4 (lower is better)
Translates to: PHQSSPLANPMTSPKGFRSHCRG*TLAPTG
Trigger: GCCGGTGGGCGCTAGTGTGCAGCCTCTGCAATGAGA...GCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp TCTCCCCCACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCCCTGTGCAGCCCCCTTaGCAAGACTCTCCTCGGGTT +
Preference number: 4 (lower is better)
Translates to: SPPHQSSPLANPMTSPKGPVQPP*QDSPRV
Trigger: AACCCGAGGAGAGTCTTGGCAAGGGGGCTGCACAGG...GCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGTGGGGGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp CCACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCGGCCCCATTCTCCTGTaGAGCCCCCTTGCCAAGACT +
Preference number: 4 (lower is better)
Translates to: PHQSSPLANPMTSPKGFRGPILL*SPLAKT
Trigger: AGTCTTGGCAAGGGGGCTGCACAGGAGAATGGGGCC...GCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp CCCACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGGGCCCCATTCTCCTGTaGAGCCCCCTTGCCAAGACT +
Preference number: 4 (lower is better)
Translates to: PTSELSSSKPNDEPKGLPGPILL*SPLAKT
Trigger: AGTCTTGGCAAGGGGGCTGCACAGGAGAATGGGGCC...CGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp GAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTCGCCTCCTCCCGGTTCTaGTCAAGGCTGGCAAAGGGC +
Preference number: 4 (lower is better)
Translates to: ELSSSKPNDEPKGLPHHLASSRF*SRLAKG
Trigger: GCCCTTTGCCAGCCTTGAGCAGAACCGGGAGGAGGC...GAGATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp CCACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCGCCTCTCCCTGCTGCTaGCGTTCCCCCTTCTTTGGA +
Preference number: 4 (lower is better)
Translates to: PHQSSPLANPMTSPKGFRASPCC*RSPFFG
Trigger: TCCAAAGAAGGGGGAACGGCAGCAGCAGGGAGAGGC...GCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp ACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATTCGTGGGCCTCTCCCTaGTGCTGCCGTTCCCCCTTC +
Preference number: 4 (lower is better)
Translates to: TSELSSSKPNDEPKGLPHSWASP*CCRSPF
Trigger: GAAGGGGGAACGGCAGCAGCAGGGAGAGGCCCACGA...ATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp CTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTCTGTTCGTGGGCCTCTCCCTaGTGCTGCCGTTCCCCCTTC +
Preference number: 4 (lower is better)
Translates to: LSSSKPNDEPKGLPHHLCSWASP*CCRSPF
Trigger: GAAGGGGGAACGGCAGCAGCAGGGAGAGGCCCACGA...ACAGAGATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp TCAGAGCCTGATGACACGATGTACTTCTTGGGCCTGATGAACATGAGGGATTTCACCCCCACTGGCGGGTaGCGTGCACCTGCCTCCCGC +
Preference number: 4 (lower is better)
Translates to: SEPDDTMYFLGLMNMRDFTPTGG*RAPASR
Trigger: GCGGGAGGCAGGTGCACGGCACCCGCCAGTGGGGGT...GAAATCCCTCATGTTCATCAGGCCCAAGAAGTACATCGTGTCATCAGGCTCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511925.5
CDS-3UTR CCA 90 bp AAGGAAATGCCAGCAGCTGAGGCTCGGCAGCCAACAGCCACGACATTCAGCAATGCGCCCACCGGCTGCTaGGAATGTGTGACACCTTGG +
Preference number: 4 (lower is better)
Translates to: KEMPAAEARQPTATTFSNAPTGC*ECVTPW
Trigger: CCAAGGTGTCACACATTCCCAGCAGCCGGTGGGCGC...ATTGCTGAATGTCGTGGCTGTTGGCTGCCGAGCCTCAGCTGCTGGCATTTCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR CCA 90 bp CATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCGCGCCCACCGGCTGCTaGGAATGTGTGACACCTTGG +
Preference number: 4 (lower is better)
Translates to: HQSSPLANPMTSPKGFRIAPTGC*ECVTPW
Trigger: CCAAGGTGTCACACATTCCCAGCAGCCGGTGGGCGC...GATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp ACTGCTCCAGGATCCTGCCTCTTCCAGGGCCGGAATCCGCGGCCTTCCCAGGAACATCCTGCTCCCGCTTaGCTAGATTGTCCTCTTCAT +
Preference number: 4 (lower is better)
Translates to: TAPGSCLFQGRNPRPSQEHPAPA*LDCPLH
Trigger: ATGAAGAGGACAATCTAGCCAAGCGGGAGCAGGATG...TTCCTGGGAAGGCCGCGGATTCCGGCCCTGGAAGAGGCAGGATCCTGGAGCAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR TCA 90 bp GGGACGTCCAGACGGGACTCCAGAGGTGATGGAAAGTGGGGGAGGCACAAAAGCCAGCATCCATGTCATTaGGGTCATAGCGACACACGC +
Preference number: 4 (lower is better)
Translates to: GTSRRDSRGDGKWGRHKSQHPCH*GHSDTR
Trigger: GCGTGTGTCGCTATGACCTCAATGACATGGATGCTG...GCTTTTGTGCCTCCCCCACTTTCCATCACCTCTGGAGTCCCGTCTGGACGTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR TCA 90 bp CCACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCGCTGCTGGGAATGTGTaGCACCTTGGTGATGGGCTC +
Preference number: 4 (lower is better)
Translates to: PHQSSPLANPMTSPKGFRAAGNV*HLGDGL
Trigger: GAGCCCATCACCAAGGTGTCACACATTCCCAGCAGC...GCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR TCA 90 bp GTCCCATATCCACAACCCACTCACAGGCTTCAAGCAGCAGGACCTTGCCATATTCCTTGTGCCAGGTGCTaGCTGCCCCACTCCAGGGGA +
Preference number: 4 (lower is better)
Translates to: VPYPQPTHRLQAAGPCHIPCARC*LPHSRG
Trigger: TCCCCTGGAGTGGGGCAGTCAGCACCTGGCACAAGG...AATATGGCAAGGTCCTGCTGCTTGAAGCCTGTGAGTGGGTTGTGGATATGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR TCA 90 bp GCCAACAGCCACGACATTCAGCAATCTCAGTGTGACAAACAACACATCTGTAGCAACGCCCGCGGAAGTTaGGGCACCCCCACTGGCGGG +
Preference number: 4 (lower is better)
Translates to: ANSHDIQQSQCDKQHICSNARGS*GTPTGG
Trigger: CCCGCCAGTGGGGGTGCCTCAACTTCCGCGGGCGTT...GCTACAGATGTGTTGTTTGTCACACTGAGATTGCTGAATGTCGTGGCTGTTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413543.6
CDS-3UTR TCA 90 bp TCAGAGCCTGATGACACGATGTACTTCTTGGGCCTGATGAACATGAGGGATTTCAACGCCCGCGGAAGTTaGGGCACCCCCACTGGCGGG +
Preference number: 4 (lower is better)
Translates to: SEPDDTMYFLGLMNMRDFNARGS*GTPTGG
Trigger: CCCGCCAGTGGGGGTGCCTCAACTTCCGCGGGCGTT...GAAATCCCTCATGTTCATCAGGCCCAAGAAGTACATCGTGTCATCAGGCTCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511925.5
CDS-3UTR GCA 90 bp CCCACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCGTCAGAATCCTCACTaGTGCTGGGAAGGCGACCTC +
Preference number: 4 (lower is better)
Translates to: PTSELSSSKPNDEPKGLPRQNPH*CWEGDL
Trigger: GAGGTCGCCTTCCCAGCAGCAGTGAGGATTCTGACG...CGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp CATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCCTAGCGCCCACCGGCTaGTGGGAATGTGTGACACCT +
Preference number: 4 (lower is better)
Translates to: HQSSPLANPMTSPKGFRILAPTG*WECVTP
Trigger: AGGTGTCACACATTCCCAGCAGCCGGTGGGCGCTAG...GATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp GACTCCATAGCTCATGCACCCCAATTACAGCAGGTGTCGGGCTGGCATAAAGGCTCTCATTGCAGAGGCTaGACACTAGCGCCCACCGGC +
Preference number: 4 (lower is better)
Translates to: DSIAHAPQLQQVSGWHKGSHCRG*TLAPTG
Trigger: GCCGGTGGGCGCTAGTGTGCAGCCTCTGCAATGAGA...GCCTTTATGCCAGCCCGACACCTGCTGTAATTGGGGTGCATGAGCTATGGAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR GCA 90 bp CATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCGGCCCCATTCTCCTGTaGAGCCCCCTTGCCAAGACT +
Preference number: 4 (lower is better)
Translates to: HQSSPLANPMTSPKGFRIGPILL*SPLAKT
Trigger: AGTCTTGGCAAGGGGGCTGCACAGGAGAATGGGGCC...GATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp AGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTCTGCCTCCTCCCGGTTCTaGTCAAGGCTGGCAAAGGGC +
Preference number: 4 (lower is better)
Translates to: SSPLANPMTSPKGFRIISASSRF*SRLAKG
Trigger: GCCCTTTGCCAGCCTTGAGCAGAACCGGGAGGAGGC...AGAGATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp TCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATGCCTCCTCCCGGTTCTaGTCAAGGCTGGCAAAGGGC +
Preference number: 4 (lower is better)
Translates to: SELSSSKPNDEPKGLPHHASSRF*SRLAKG
Trigger: GCCCTTTGCCAGCCTTGAGCAGAACCGGGAGGAGGC...ATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp GAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTCGCCTCTCCCTGCTGCTaGCGTTCCCCCTTCTTTGGA +
Preference number: 4 (lower is better)
Translates to: ELSSSKPNDEPKGLPHHLASPCC*RSPFFG
Trigger: TCCAAAGAAGGGGGAACGGCAGCAGCAGGGAGAGGC...GAGATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp GTCCCATATCCACAACCCACTCACAGGCTTCAAGCAGCAGGACCTTGCCATATTTCGTGGGCCTCTCCCTaGTGCTGCCGTTCCCCCTTC +
Preference number: 4 (lower is better)
Translates to: VPYPQPTHRLQAAGPCHISWASP*CCRSPF
Trigger: GAAGGGGGAACGGCAGCAGCAGGGAGAGGCCCACGA...AATATGGCAAGGTCCTGCTGCTTGAAGCCTGTGAGTGGGTTGTGGATATGGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp AATCCCAAGCTGGCTCAAGAGCCAGTGGTTAGGGAAGAAGAAGGTCAAGTGGACTCGTGGGCCTCTCCCTaGTGCTGCCGTTCCCCCTTC +
Preference number: 4 (lower is better)
Translates to: NPKLAQEPVVREEEGQVDSWASP*CCRSPF
Trigger: GAAGGGGGAACGGCAGCAGCAGGGAGAGGCCCACGA...GTCCACTTGACCTTCTTCTTCCCTAACCACTGGCTCTTGAGCCAGCTTGGGATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp CTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTCTGTCCCCCGCCCCGGCAATaGCCAAGTTACTGGTGGGAT +
Preference number: 4 (lower is better)
Translates to: LSSSKPNDEPKGLPHHLCPPPRQ*PSYWWD
Trigger: ATCCCACCAGTAACTTGGGCATTGCCGGGGCGGGGG...ACAGAGATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512960.5
CDS-3UTR CCA 90 bp AGCGACACACGCTGTCAGCCAGCGTCCGGATGTCCACATAGCCCAACTCGGGAGTGGGATCGGGAATTCTaGGACCAAGTAGTTGACAGG +
Preference number: 4 (lower is better)
Translates to: SDTRCQPASGCPHSPTREWDREF*DQVVDR
Trigger: CCTGTCAACTACTTGGTCCCAGAATTCCCGATCCCA...CTCCCGAGTTGGGCTATGTGGACATCCGGACGCTGGCTGACAGCGTGTGTCGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511925.5
CDS-3UTR CCA 90 bp GTCCCATATCCACAACCCACTCACAGGCTTCAAGCAGCAGGACCTTGCCATATTCCACAGGCTGAGGGATaGTCCCCGGGCTCACAGGCA +
Preference number: 4 (lower is better)
Translates to: VPYPQPTHRLQAAGPCHIPQAEG*SPGSQA
Trigger: TGCCTGTGAGCCCGGGGACCATCCCTCAGCCTGTGG...AATATGGCAAGGTCCTGCTGCTTGAAGCCTGTGAGTGGGTTGTGGATATGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp CCCCCACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCTTCAGACACAACCCTaGCCACAGGCTGAGGGATGG +
Preference number: 4 (lower is better)
Translates to: PPHQSSPLANPMTSPKGFLQTQP*PQAEGW
Trigger: CCATCCCTCAGCCTGTGGCCAGGGTTGTGTCTGAAG...GAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGTGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp CTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTCTGTGCGCCCACCGGCTGCTaGGAATGTGTGACACCTTGG +
Preference number: 4 (lower is better)
Translates to: LSSSKPNDEPKGLPHHLCAPTGC*ECVTPW
Trigger: CCAAGGTGTCACACATTCCCAGCAGCCGGTGGGCGC...ACAGAGATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp CCCACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGGGTTCTGCTCAAGGCTaGCAAAGGGCTCCAGCGGAT +
Preference number: 4 (lower is better)
Translates to: PTSELSSSKPNDEPKGLPGSAQG*QRAPAD
Trigger: ATCCGCTGGAGCCCTTTGCCAGCCTTGAGCAGAACC...CGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp CCACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCGGTTCTGCTCAAGGCTaGCAAAGGGCTCCAGCGGAT +
Preference number: 4 (lower is better)
Translates to: PHQSSPLANPMTSPKGFRGSAQG*QRAPAD
Trigger: ATCCGCTGGAGCCCTTTGCCAGCCTTGAGCAGAACC...GCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp ACAAAACTGCTCCAGGATCCTGCCTCTTCCAGGGCCGGAATCCGCGGCCTTCCCCACAACCTCATGCTGTaGTGTGTACAAGGGTCTGAG +
Preference number: 4 (lower is better)
Translates to: TKLLQDPASSRAGIRGLPHNLML*CVQGSE
Trigger: CTCAGACCCTTGTACACACCACAGCATGAGGTTGTG...GGGAAGGCCGCGGATTCCGGCCCTGGAAGAGGCAGGATCCTGGAGCAGTTTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR CCA 90 bp CAGGGAAATCCCAAGCTGGCTCAAGAGCCAGTGGTTAGGGAAGAAGAAGGTCAAACAGCAGGCAGCCGGTaGGAGGGGAGAGAGGCTGCT +
Preference number: 4 (lower is better)
Translates to: QGNPKLAQEPVVREEEGQTAGSR*EGREAA
Trigger: AGCAGCCTCTCTCCCCTCCCACCGGCTGCCTGCTGT...TTGACCTTCTTCTTCCCTAACCACTGGCTCTTGAGCCAGCTTGGGATTTCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610919.4
CDS-3UTR TCA 90 bp CATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCGCTGCTGGGAATGTGTaGCACCTTGGTGATGGGCTC +
Preference number: 4 (lower is better)
Translates to: HQSSPLANPMTSPKGFRIAAGNV*HLGDGL
Trigger: GAGCCCATCACCAAGGTGTCACACATTCCCAGCAGC...GATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR TCA 90 bp GGCCACTTGGGTACCTTTCAGTGCAGACTGCTTCAGGCCAGAAAACCTCACTCCGCTGCTGGGAATGTGTaGCACCTTGGTGATGGGCTC +
Preference number: 4 (lower is better)
Translates to: GHLGTFQCRLLQARKPHSAAGNV*HLGDGL
Trigger: GAGCCCATCACCAAGGTGTCACACATTCCCAGCAGC...GGAGTGAGGTTTTCTGGCCTGAAGCAGTCTGCACTGAAAGGTACCCAAGTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR TCA 90 bp CCACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCGGGTCACCATGTAAGTaGGGTTCCGAACCCTCTCCA +
Preference number: 4 (lower is better)
Translates to: PHQSSPLANPMTSPKGFRGSPCK*GSEPSP
Trigger: TGGAGAGGGTTCGGAACCTCACTTACATGGTGACCC...GCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR TCA 90 bp CATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCCAAATATGGGTAGTCTaGGTGCTGGTGGCAGGCCCC +
Preference number: 4 (lower is better)
Translates to: HQSSPLANPMTSPKGFRIQIWVV*VLVAGP
Trigger: GGGGCCTGCCACCAGCACTCAGACTACCCATATTTG...GATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp TCTCCCCCACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCCAGAATCCTCACTGCTaGTGGGAAGGCGACCTCGTT +
Preference number: 4 (lower is better)
Translates to: SPPHQSSPLANPMTSPKGQNPHC*WEGDLV
Trigger: AACGAGGTCGCCTTCCCAGCAGCAGTGAGGATTCTG...GCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGTGGGGGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp ACGCCTCATTATTCCTGTAGCAGGAAGGGACGTCCAGACGGGACTCCAGAGGTGTCTCTGGGCTGCCAATaGTCACCTCAGGGATCCACA +
Preference number: 4 (lower is better)
Translates to: TPHYSCSRKGRPDGTPEVSLGCQ*SPQGST
Trigger: TGTGGATCCCTGAGGTGAGCATTGGCAGCCCAGAGA...CACCTCTGGAGTCCCGTCTGGACGTCCCTTCCTGCTACAGGAATAATGAGGCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR GCA 90 bp TCTCCCCCACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCCCATCTTCTCTGGGCTaGCAATGCTCACCTCAGGGA +
Preference number: 4 (lower is better)
Translates to: SPPHQSSPLANPMTSPKGPSSLG*QCSPQG
Trigger: TCCCTGAGGTGAGCATTGGCAGCCCAGAGAAGATGG...GCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGTGGGGGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp GACTCCAGAGGTGATGGAAAGTGGGGGAGGCACAAAAGCAGCAAACAGCAGAAGCTAGCGCCCACCGGCTaGTGGGAATGTGTGACACCT +
Preference number: 4 (lower is better)
Translates to: DSRGDGKWGRHKSSKQQKLAPTG*WECVTP
Trigger: AGGTGTCACACATTCCCAGCAGCCGGTGGGCGCTAG...CTTCTGCTGTTTGCTGCTTTTGTGCCTCCCCCACTTTCCATCACCTCTGGAGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR GCA 90 bp TCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTAGCGCCCACCGGCTaGTGGGAATGTGTGACACCT +
Preference number: 4 (lower is better)
Translates to: SELSSSKPNDEPKGLPHHLAPTG*WECVTP
Trigger: AGGTGTCACACATTCCCAGCAGCCGGTGGGCGCTAG...ATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp AGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTCTTCTCATTGCAGAGGCTaGACACTAGCGCCCACCGGC +
Preference number: 4 (lower is better)
Translates to: SSPLANPMTSPKGFRIISSHCRG*TLAPTG
Trigger: GCCGGTGGGCGCTAGTGTGCAGCCTCTGCAATGAGA...AGAGATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp ACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATTCTCATTGCAGAGGCTaGACACTAGCGCCCACCGGC +
Preference number: 4 (lower is better)
Translates to: TSELSSSKPNDEPKGLPHSHCRG*TLAPTG
Trigger: GCCGGTGGGCGCTAGTGTGCAGCCTCTGCAATGAGA...ATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp ACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCCTGTGCAGCCCCCTTaGCAAGACTCTCCTCGGGTT +
Preference number: 4 (lower is better)
Translates to: TSELSSSKPNDEPKGLPHPVQPP*QDSPRV
Trigger: AACCCGAGGAGAGTCTTGGCAAGGGGGCTGCACAGG...ATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp CTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTCTGTCCTGTGCAGCCCCCTTaGCAAGACTCTCCTCGGGTT +
Preference number: 4 (lower is better)
Translates to: LSSSKPNDEPKGLPHHLCPVQPP*QDSPRV
Trigger: AACCCGAGGAGAGTCTTGGCAAGGGGGCTGCACAGG...ACAGAGATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp CCCACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCCACACAGGTCTGGCTaGTTCAGCAGGGTTTTGCCT +
Preference number: 4 (lower is better)
Translates to: PTSELSSSKPNDEPKGLPPHRSG*FSRVLP
Trigger: AGGCAAAACCCTGCTGAAGCAGCCAGACCTGTGTGG...CGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp TCTCCCCCACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCCCACACAGGTCTGGCTaGTTCAGCAGGGTTTTGCCT +
Preference number: 4 (lower is better)
Translates to: SPPHQSSPLANPMTSPKGPHRSG*FSRVLP
Trigger: AGGCAAAACCCTGCTGAAGCAGCCAGACCTGTGTGG...GCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGTGGGGGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp GAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTCGGAGGGGAGAGAGGCTaGTATTTAAACGCCCGCGGA +
Preference number: 4 (lower is better)
Translates to: ELSSSKPNDEPKGLPHHLGGERG*YLNARG
Trigger: TCCGCGGGCGTTTAAATAGCAGCCTCTCTCCCCTCC...GAGATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610919.4
CDS-3UTR GCA 90 bp ACAAAACTGCTCCAGGATCCTGCCTCTTCCAGGGCCGGAATCCGCGGCCTTCCCACCAACACAACCTCATaGTGTGGTGTGTACAAGGGT +
Preference number: 4 (lower is better)
Translates to: TKLLQDPASSRAGIRGLPTNTTS*CGVYKG
Trigger: ACCCTTGTACACACCACAGCATGAGGTTGTGTTGGT...GGGAAGGCCGCGGATTCCGGCCCTGGAAGAGGCAGGATCCTGGAGCAGTTTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR GCA 90 bp AGGAAATGCCAGCAGCTGAGGCTCGGCAGCCAACAGCCACGACATTCAGCAATCCACATCAGCACCCACTaGCTGCTCTGCTCCATGACA +
Preference number: 4 (lower is better)
Translates to: RKCQQLRLGSQQPRHSAIHISTH*LLCSMT
Trigger: TGTCATGGAGCAGAGCAGGCAGTGGGTGCTGATGTG...GATTGCTGAATGTCGTGGCTGTTGGCTGCCGAGCCTCAGCTGCTGGCATTTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR GCA 90 bp AGTCACCAGAGTCTGGAAGTTCTTCGCTTGAACTTGAGTAGCCACTGTACTATTACCCCCACTGGCGGGTaGCGTGCACCTGCCTCCCGC +
Preference number: 4 (lower is better)
Translates to: SHQSLEVLRLNLSSHCTITPTGG*RAPASR
Trigger: GCGGGAGGCAGGTGCACGGCACCCGCCAGTGGGGGT...AATAGTACAGTGGCTACTCAAGTTCAAGCGAAGAACTTCCAGACTCTGGTGACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000610919.4
CDS-3UTR CCA 90 bp GGGACGTCCAGACGGGACTCCAGAGGTGATGGAAAGTGGGGGAGGCACAAAAGCTGGGATCGGGAATTCTaGGACCAAGTAGTTGACAGG +
Preference number: 4 (lower is better)
Translates to: GTSRRDSRGDGKWGRHKSWDREF*DQVVDR
Trigger: CCTGTCAACTACTTGGTCCCAGAATTCCCGATCCCA...GCTTTTGTGCCTCCCCCACTTTCCATCACCTCTGGAGTCCCGTCTGGACGTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR CCA 90 bp CATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCCTTCAGACACAACCCTaGCCACAGGCTGAGGGATGG +
Preference number: 4 (lower is better)
Translates to: HQSSPLANPMTSPKGFRILQTQP*PQAEGW
Trigger: CCATCCCTCAGCCTGTGGCCAGGGTTGTGTCTGAAG...GATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp CAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCGGTTCTGCTCAAGGCTaGCAAAGGGCTCCAGCGGAT +
Preference number: 4 (lower is better)
Translates to: QSSPLANPMTSPKGFRIIGSAQG*QRAPAD
Trigger: ATCCGCTGGAGCCCTTTGCCAGCCTTGAGCAGAACC...GATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp CCACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCCCGTTCCCCCTTCTTTaGAATCCGGAATCCTCCCCA +
Preference number: 4 (lower is better)
Translates to: PHQSSPLANPMTSPKGFRPFPLL*NPESSP
Trigger: TGGGGAGGATTCCGGATTCCAAAGAAGGGGGAACGG...GCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp CCCACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCCGTTCCCCCTTCTTTaGAATCCGGAATCCTCCCCA +
Preference number: 4 (lower is better)
Translates to: PTSELSSSKPNDEPKGLPPFPLL*NPESSP
Trigger: TGGGGAGGATTCCGGATTCCAAAGAAGGGGGAACGG...CGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR TCA 90 bp ACAAAACTGCTCCAGGATCCTGCCTCTTCCAGGGCCGGAATCCGCGGCCTTCCCTGTCCTAAACACCTCTaGAGGCTTTCGATCTTCATG +
Preference number: 4 (lower is better)
Translates to: TKLLQDPASSRAGIRGLPCPKHL*RLSIFM
Trigger: CATGAAGATCGAAAGCCTTCAGAGGTGTTTAGGACA...GGGAAGGCCGCGGATTCCGGCCCTGGAAGAGGCAGGATCCTGGAGCAGTTTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR TCA 90 bp CCACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCCAGCATCCATGTCATTaGGGTCATAGCGACACACGC +
Preference number: 4 (lower is better)
Translates to: PHQSSPLANPMTSPKGFRQHPCH*GHSDTR
Trigger: GCGTGTGTCGCTATGACCTCAATGACATGGATGCTG...GCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR TCA 90 bp CCACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCTGCCCTCTGGTACCTTaGGGATTCCATAACAGGCCT +
Preference number: 4 (lower is better)
Translates to: PHQSSPLANPMTSPKGFRCPLVP*GFHNRP
Trigger: AGGCCTGTTATGGAATCCTCAAGGTACCAGAGGGCA...GCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR TCA 90 bp CATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCGGGTCACCATGTAAGTaGGGTTCCGAACCCTCTCCA +
Preference number: 4 (lower is better)
Translates to: HQSSPLANPMTSPKGFRIGSPCK*GSEPSP
Trigger: TGGAGAGGGTTCGGAACCTCACTTACATGGTGACCC...GATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR TCA 90 bp ACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCAAATATGGGTAGTCTaGGTGCTGGTGGCAGGCCCC +
Preference number: 4 (lower is better)
Translates to: TSELSSSKPNDEPKGLPHQIWVV*VLVAGP
Trigger: GGGGCCTGCCACCAGCACTCAGACTACCCATATTTG...ATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR TCA 90 bp TCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCAAATATGGGTAGTCTaGGTGCTGGTGGCAGGCCCC +
Preference number: 4 (lower is better)
Translates to: SELSSSKPNDEPKGLPHHQIWVV*VLVAGP
Trigger: GGGGCCTGCCACCAGCACTCAGACTACCCATATTTG...ATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp AAGGAAATGCCAGCAGCTGAGGCTCGGCAGCCAACAGCCACGACATTCAGCAATCAGAATCCTCACTGCTaGTGGGAAGGCGACCTCGTT +
Preference number: 4 (lower is better)
Translates to: KEMPAAEARQPTATTFSNQNPHC*WEGDLV
Trigger: AACGAGGTCGCCTTCCCAGCAGCAGTGAGGATTCTG...ATTGCTGAATGTCGTGGCTGTTGGCTGCCGAGCCTCAGCTGCTGGCATTTCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR GCA 90 bp TCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCGTCAGAATCCTCACTaGTGCTGGGAAGGCGACCTC +
Preference number: 4 (lower is better)
Translates to: SELSSSKPNDEPKGLPHHRQNPH*CWEGDL
Trigger: GAGGTCGCCTTCCCAGCAGCAGTGAGGATTCTGACG...ATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp CTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTCTGTCGTCAGAATCCTCACTaGTGCTGGGAAGGCGACCTC +
Preference number: 4 (lower is better)
Translates to: LSSSKPNDEPKGLPHHLCRQNPH*CWEGDL
Trigger: GAGGTCGCCTTCCCAGCAGCAGTGAGGATTCTGACG...ACAGAGATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp GGGACGTCCAGACGGGACTCCAGAGGTGATGGAAAGTGGGGGAGGCACAAAAGCCTGTCTCCAGGGATCTaGCAACACATAGTACTCATC +
Preference number: 4 (lower is better)
Translates to: GTSRRDSRGDGKWGRHKSLSPGI*QHIVLI
Trigger: GATGAGTACTATGTGTTGGCAGATCCCTGGAGACAG...GCTTTTGTGCCTCCCCCACTTTCCATCACCTCTGGAGTCCCGTCTGGACGTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR GCA 90 bp CAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTCTCTGGGCTGCCAATaGTCACCTCAGGGATCCACA +
Preference number: 4 (lower is better)
Translates to: QSSPLANPMTSPKGFRIISLGCQ*SPQGST
Trigger: TGTGGATCCCTGAGGTGAGCATTGGCAGCCCAGAGA...GATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp GAGAGGCAAAGTCTTCTTTACACTCACCACCAGGGGGCGTATGGGAGCACAAAATCTCATTGCAGAGGCTaGACACTAGCGCCCACCGGC +
Preference number: 4 (lower is better)
Translates to: ERQSLLYTHHQGAYGSTKSHCRG*TLAPTG
Trigger: GCCGGTGGGCGCTAGTGTGCAGCCTCTGCAATGAGA...TTTTGTGCTCCCATACGCCCCCTGGTGGTGAGTGTAAAGAAGACTTTGCCTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR GCA 90 bp TCAGACAGATCTGACACCCCTGTCCACCAGGAATCCCACCCATACCCGCACACACCCCAAACTTCTCATTaGAGAGGCTGCACACTAGCG +
Preference number: 4 (lower is better)
Translates to: SDRSDTPVHQESHPYPHTPQTSH*RGCTLA
Trigger: CGCTAGTGTGCAGCCTCTGCAATGAGAAGTTTGGGG...TGTGTGCGGGTATGGGTGGGATTCCTGGTGGACAGGGGTGTCAGATCTGTCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR GCA 90 bp TCTCCCCCACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCCCCCAAACTTCTCATTaGAGAGGCTGCACACTAGCG +
Preference number: 4 (lower is better)
Translates to: SPPHQSSPLANPMTSPKGPQTSH*RGCTLA
Trigger: CGCTAGTGTGCAGCCTCTGCAATGAGAAGTTTGGGG...GCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGTGGGGGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp TCTCCCCCACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTCACATGGAAGGCTGTaGGGCAGTTCTTCACAGAGC +
Preference number: 4 (lower is better)
Translates to: SPPHQSSPLANPMTSPKGSHGRL*GSSSQS
Trigger: GCTCTGTGAAGAACTGCCGCACAGCCTTCCATGTGA...GCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGTGGGGGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp ACGCCTCATTATTCCTGTAGCAGGAAGGGACGTCCAGACGGGACTCCAGAGGTGTCACATGGAAGGCTGTaGGGCAGTTCTTCACAGAGC +
Preference number: 4 (lower is better)
Translates to: TPHYSCSRKGRPDGTPEVSHGRL*GSSSQS
Trigger: GCTCTGTGAAGAACTGCCGCACAGCCTTCCATGTGA...CACCTCTGGAGTCCCGTCTGGACGTCCCTTCCTGCTACAGGAATAATGAGGCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR GCA 90 bp AGGAAATGCCAGCAGCTGAGGCTCGGCAGCCAACAGCCACGACATTCAGCAATCTCACATGGAAGGCTGTaGGGCAGTTCTTCACAGAGC +
Preference number: 4 (lower is better)
Translates to: RKCQQLRLGSQQPRHSAISHGRL*GSSSQS
Trigger: GCTCTGTGAAGAACTGCCGCACAGCCTTCCATGTGA...GATTGCTGAATGTCGTGGCTGTTGGCTGCCGAGCCTCAGCTGCTGGCATTTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR GCA 90 bp GTCCCATATCCACAACCCACTCACAGGCTTCAAGCAGCAGGACCTTGCCATATTCCTGTGCAGCCCCCTTaGCAAGACTCTCCTCGGGTT +
Preference number: 4 (lower is better)
Translates to: VPYPQPTHRLQAAGPCHIPVQPP*QDSPRV
Trigger: AACCCGAGGAGAGTCTTGGCAAGGGGGCTGCACAGG...AATATGGCAAGGTCCTGCTGCTTGAAGCCTGTGAGTGGGTTGTGGATATGGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp CAGGGAAATCCCAAGCTGGCTCAAGAGCCAGTGGTTAGGGAAGAAGAAGGTCAAGGCCCCATTCTCCTGTaGAGCCCCCTTGCCAAGACT +
Preference number: 4 (lower is better)
Translates to: QGNPKLAQEPVVREEEGQGPILL*SPLAKT
Trigger: AGTCTTGGCAAGGGGGCTGCACAGGAGAATGGGGCC...TTGACCTTCTTCTTCCCTAACCACTGGCTCTTGAGCCAGCTTGGGATTTCCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp GAGAGGCAAAGTCTTCTTTACACTCACCACCAGGGGGCGTATGGGAGCACAAAAGGCCCCATTCTCCTGTaGAGCCCCCTTGCCAAGACT +
Preference number: 4 (lower is better)
Translates to: ERQSLLYTHHQGAYGSTKGPILL*SPLAKT
Trigger: AGTCTTGGCAAGGGGGCTGCACAGGAGAATGGGGCC...TTTTGTGCTCCCATACGCCCCCTGGTGGTGAGTGTAAAGAAGACTTTGCCTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR GCA 90 bp AATCCCAAGCTGGCTCAAGAGCCAGTGGTTAGGGAAGAAGAAGGTCAAGTGGACGGCCCCATTCTCCTGTaGAGCCCCCTTGCCAAGACT +
Preference number: 4 (lower is better)
Translates to: NPKLAQEPVVREEEGQVDGPILL*SPLAKT
Trigger: AGTCTTGGCAAGGGGGCTGCACAGGAGAATGGGGCC...GTCCACTTGACCTTCTTCTTCCCTAACCACTGGCTCTTGAGCCAGCTTGGGATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp TGTACTATTGGAAGCCAGATGGCCAGGTATTGGCAATGGCCAGGGAAATCCCAAGCCTCCTCCCGGTTCTaGTCAAGGCTGGCAAAGGGC +
Preference number: 4 (lower is better)
Translates to: CTIGSQMARYWQWPGKSQASSRF*SRLAKG
Trigger: GCCCTTTGCCAGCCTTGAGCAGAACCGGGAGGAGGC...TTGGGATTTCCCTGGCCATTGCCAATACCTGGCCATCTGGCTTCCAATAGTACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp CAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCCCACACAGGTCTGGCTaGTTCAGCAGGGTTTTGCCT +
Preference number: 4 (lower is better)
Translates to: QSSPLANPMTSPKGFRIIPHRSG*FSRVLP
Trigger: AGGCAAAACCCTGCTGAAGCAGCCAGACCTGTGTGG...GATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp CAGGGAAATCCCAAGCTGGCTCAAGAGCCAGTGGTTAGGGAAGAAGAAGGTCAAGCCTCTCCCTGCTGCTaGCGTTCCCCCTTCTTTGGA +
Preference number: 4 (lower is better)
Translates to: QGNPKLAQEPVVREEEGQASPCC*RSPFFG
Trigger: TCCAAAGAAGGGGGAACGGCAGCAGCAGGGAGAGGC...TTGACCTTCTTCTTCCCTAACCACTGGCTCTTGAGCCAGCTTGGGATTTCCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp GACTCCATAGCTCATGCACCCCAATTACAGCAGGTGTCGGGCTGGCATAAAGGCCTGGCTATCATTTCTTaGTCTGGGCGAGCGTTCGCC +
Preference number: 4 (lower is better)
Translates to: DSIAHAPQLQQVSGWHKGLAIIS*SGRAFA
Trigger: GGCGAACGCTCGCCCAGAGCAAGAAATGATAGCCAG...GCCTTTATGCCAGCCCGACACCTGCTGTAATTGGGGTGCATGAGCTATGGAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR CCA 90 bp CCACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCGAGCTTCTCCTATGCTaGGATCGGGAATTCTGGGAC +
Preference number: 4 (lower is better)
Translates to: PHQSSPLANPMTSPKGFRELLLC*DREFWD
Trigger: GTCCCAGAATTCCCGATCCCAGCATAGGAGAAGCTC...GCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp TCTCCCCCACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCGAGCTTCTCCTATGCTaGGATCGGGAATTCTGGGAC +
Preference number: 4 (lower is better)
Translates to: SPPHQSSPLANPMTSPKGELLLC*DREFWD
Trigger: GTCCCAGAATTCCCGATCCCAGCATAGGAGAAGCTC...GCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGTGGGGGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp GACTCCAGAGGTGATGGAAAGTGGGGGAGGCACAAAAGCAGCAAACAGCAGAAGCTTCAGACACAACCCTaGCCACAGGCTGAGGGATGG +
Preference number: 4 (lower is better)
Translates to: DSRGDGKWGRHKSSKQQKLQTQP*PQAEGW
Trigger: CCATCCCTCAGCCTGTGGCCAGGGTTGTGTCTGAAG...CTTCTGCTGTTTGCTGCTTTTGTGCCTCCCCCACTTTCCATCACCTCTGGAGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR CCA 90 bp TCAGACAGATCTGACACCCCTGTCCACCAGGAATCCCACCCATACCCGCACACAAGAGCACAGCTAACGTaGACCCACTTGGTTCCGCTA +
Preference number: 4 (lower is better)
Translates to: SDRSDTPVHQESHPYPHTRAQLT*THLVPL
Trigger: TAGCGGAACCAAGTGGGTCCACGTTAGCTGTGCTCT...TGTGTGCGGGTATGGGTGGGATTCCTGGTGGACAGGGGTGTCAGATCTGTCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR CCA 90 bp CTGAGAGTATATGACTGGCTATCATTTCTTGCTCTGGGCGAGCGTTCGCCTCTTGCGCCCACCGGCTGCTaGGAATGTGTGACACCTTGG +
Preference number: 4 (lower is better)
Translates to: LRVYDWLSFLALGERSPLAPTGC*ECVTPW
Trigger: CCAAGGTGTCACACATTCCCAGCAGCCGGTGGGCGC...AAGAGGCGAACGCTCGCCCAGAGCAAGAAATGATAGCCAGTCATATACTCTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR CCA 90 bp CCCACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGAAAGCACAGGTCACATaGAAGGCTGTGCGGCAGTTC +
Preference number: 4 (lower is better)
Translates to: PTSELSSSKPNDEPKGLPKAQVT*KAVRQF
Trigger: GAACTGCCGCACAGCCTTCCATGTGACCTGTGCTTT...CGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp AGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTCTGGTTCTGCTCAAGGCTaGCAAAGGGCTCCAGCGGAT +
Preference number: 4 (lower is better)
Translates to: SSPLANPMTSPKGFRIISGSAQG*QRAPAD
Trigger: ATCCGCTGGAGCCCTTTGCCAGCCTTGAGCAGAACC...AGAGATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp ACAAAACTGCTCCAGGATCCTGCCTCTTCCAGGGCCGGAATCCGCGGCCTTCCCCTCTTCATCTTTCTTTaGGGTGATCAGGGGCTTGTT +
Preference number: 4 (lower is better)
Translates to: TKLLQDPASSRAGIRGLPLFIFL*GDQGLV
Trigger: AACAAGCCCCTGATCACCCCAAAGAAAGATGAAGAG...GGGAAGGCCGCGGATTCCGGCCCTGGAAGAGGCAGGATCCTGGAGCAGTTTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR CCA 90 bp CATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCACCCAAAAAGCTCTCTaGGACCACCATCCCCTCCCT +
Preference number: 4 (lower is better)
Translates to: HQSSPLANPMTSPKGFRITQKAL*DHHPLP
Trigger: AGGGAGGGGATGGTGGTCCCAGAGAGCTTTTTGGGT...GATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp GAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTCACCCAAAAAGCTCTCTaGGACCACCATCCCCTCCCT +
Preference number: 4 (lower is better)
Translates to: ELSSSKPNDEPKGLPHHLTQKAL*DHHPLP
Trigger: AGGGAGGGGATGGTGGTCCCAGAGAGCTTTTTGGGT...GAGATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp CCACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCTTGTCCAGATGCCTCTaGGACACATCTGTGGACCTG +
Preference number: 4 (lower is better)
Translates to: PHQSSPLANPMTSPKGFRLSRCL*DTSVDL
Trigger: CAGGTCCACAGATGTGTCCCAGAGGCATCTGGACAA...GCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp CCCCCACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCTTGTCCAGATGCCTCTaGGACACATCTGTGGACCTG +
Preference number: 4 (lower is better)
Translates to: PPHQSSPLANPMTSPKGFLSRCL*DTSVDL
Trigger: CAGGTCCACAGATGTGTCCCAGAGGCATCTGGACAA...GAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGTGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp CCCACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGGGGAGCCATTGCACTTaGGCACTATCTCCTTCCTTG +
Preference number: 4 (lower is better)
Translates to: PTSELSSSKPNDEPKGLPGSHCT*ALSPSL
Trigger: CAAGGAAGGAGATAGTGCCCAAGTGCAATGGCTCCC...CGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp CCCACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGTCCCCAGTTTTTCACTaGGCTGGCAGGTGTTGTAGG +
Preference number: 4 (lower is better)
Translates to: PTSELSSSKPNDEPKGLPSPVFH*AGRCCR
Trigger: CCTACAACACCTGCCAGCCCAGTGAAAAACTGGGGA...CGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp GAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTCCCGTTCCCCCTTCTTTaGAATCCGGAATCCTCCCCA +
Preference number: 4 (lower is better)
Translates to: ELSSSKPNDEPKGLPHHLPFPLL*NPESSP
Trigger: TGGGGAGGATTCCGGATTCCAAAGAAGGGGGAACGG...GAGATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp ATGCACCCCAATTACAGCAGGTGTCGGGCTGGCATAAAGGCTTCTTACCAGGATGCAGCCTATTACCGGTaGGAGGGGAGAGAGGCTGCT +
Preference number: 4 (lower is better)
Translates to: MHPNYSRCRAGIKASYQDAAYYR*EGREAA
Trigger: AGCAGCCTCTCTCCCCTCCCACCGGTAATAGGCTGC...ATCCTGGTAAGAAGCCTTTATGCCAGCCCGACACCTGCTGTAATTGGGGTGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413543.6
CDS-3UTR CCA 90 bp GGCCACTTGGGTACCTTTCAGTGCAGACTGCTTCAGGCCAGAAAACCTCACTCCACCCAAGAAACAAAGTaGGGGCCAGTGAGCAGCCGT +
Preference number: 4 (lower is better)
Translates to: GHLGTFQCRLLQARKPHSTQETK*GPVSSR
Trigger: ACGGCTGCTCACTGGCCCCCACTTTGTTTCTTGGGT...GGAGTGAGGTTTTCTGGCCTGAAGCAGTCTGCACTGAAAGGTACCCAAGTGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR CCA 90 bp CCCACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGTGCCCAAGTTACTGGTaGGATAGTAACGCTGCGCTC +
Preference number: 4 (lower is better)
Translates to: PTSELSSSKPNDEPKGLPCPSYW*DSNAAL
Trigger: GAGCGCAGCGTTACTATCCCACCAGTAACTTGGGCA...CGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512960.5
CDS-3UTR CCA 90 bp AGGCATTCCCATCTCCTTAAATTCTTCATTGGTCAGTTCCAGCCATGCAGCATCTTGAGGCACCCCCACTaGCGGGTGCCGTGCACCTGC +
Preference number: 4 (lower is better)
Translates to: RHSHLLKFFIGQFQPCSILRHPH*RVPCTC
Trigger: GCAGGTGCACGGCACCCGCCAGTGGGGGTGCCTCAA...GATGCTGCATGGCTGGAACTGACCAATGAAGAATTTAAGGAGATGGGAATGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511925.5
CDS-3UTR TCA 90 bp CAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCCAGCATCCATGTCATTaGGGTCATAGCGACACACGC +
Preference number: 4 (lower is better)
Translates to: QSSPLANPMTSPKGFRIIQHPCH*GHSDTR
Trigger: GCGTGTGTCGCTATGACCTCAATGACATGGATGCTG...GATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR TCA 90 bp GACTCCATAGCTCATGCACCCCAATTACAGCAGGTGTCGGGCTGGCATAAAGGCCAGCATCCATGTCATTaGGGTCATAGCGACACACGC +
Preference number: 4 (lower is better)
Translates to: DSIAHAPQLQQVSGWHKGQHPCH*GHSDTR
Trigger: GCGTGTGTCGCTATGACCTCAATGACATGGATGCTG...GCCTTTATGCCAGCCCGACACCTGCTGTAATTGGGGTGCATGAGCTATGGAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR TCA 90 bp CATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCCAGCATCCATGTCATTaGGGTCATAGCGACACACGC +
Preference number: 4 (lower is better)
Translates to: HQSSPLANPMTSPKGFRIQHPCH*GHSDTR
Trigger: GCGTGTGTCGCTATGACCTCAATGACATGGATGCTG...GATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR TCA 90 bp ACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATGGGTCACCATGTAAGTaGGGTTCCGAACCCTCTCCA +
Preference number: 4 (lower is better)
Translates to: TSELSSSKPNDEPKGLPHGSPCK*GSEPSP
Trigger: TGGAGAGGGTTCGGAACCTCACTTACATGGTGACCC...ATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR TCA 90 bp AATCCCAAGCTGGCTCAAGAGCCAGTGGTTAGGGAAGAAGAAGGTCAAGTGGACCAAATATGGGTAGTCTaGGTGCTGGTGGCAGGCCCC +
Preference number: 4 (lower is better)
Translates to: NPKLAQEPVVREEEGQVDQIWVV*VLVAGP
Trigger: GGGGCCTGCCACCAGCACTCAGACTACCCATATTTG...GTCCACTTGACCTTCTTCTTCCCTAACCACTGGCTCTTGAGCCAGCTTGGGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR TCA 90 bp TCTCCCCCACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTCTGCAGCAACAAGCTaGTCTGGACAGCAGTCTTTC +
Preference number: 4 (lower is better)
Translates to: SPPHQSSPLANPMTSPKGSAATS*SGQQSF
Trigger: GAAAGACTGCTGTCCAGATCAGCTTGTTGCTGCAGA...GCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGTGGGGGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR TCA 90 bp GGGACGTCCAGACGGGACTCCAGAGGTGATGGAAAGTGGGGGAGGCACAAAAGCGTGTGTACAAGGGTCTaGGAGTATATGACTGGCTAT +
Preference number: 4 (lower is better)
Translates to: GTSRRDSRGDGKWGRHKSVCTRV*EYMTGY
Trigger: ATAGCCAGTCATATACTCTCAGACCCTTGTACACAC...GCTTTTGTGCCTCCCCCACTTTCCATCACCTCTGGAGTCCCGTCTGGACGTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR TCA 90 bp AGCAGGTGTCGGGCTGGCATAAAGGCTTCTTACCAGGATTCCAGTTTATCCTTCCAAAGTGGGGGCCAGTaGGCAGCCGTGCTTAGCTTC +
Preference number: 4 (lower is better)
Translates to: SRCRAGIKASYQDSSLSFQSGGQ*AAVLSF
Trigger: GAAGCTAAGCACGGCTGCTCACTGGCCCCCACTTTG...GAAGGATAAACTGGAATCCTGGTAAGAAGCCTTTATGCCAGCCCGACACCTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR TCA 90 bp CAAAGTCTTCTTTACACTCACCACCAGGGGGCGTATGGGAGCACAAAAGCCTCACTCCTCAGACAGATCTaGCACCCCTGTCCACCAGGA +
Preference number: 4 (lower is better)
Translates to: QSLLYTHHQGAYGSTKASLLRQI*HPCPPG
Trigger: TCCTGGTGGACAGGGGTGTCAGATCTGTCTGAGGAG...TGAGGCTTTTGTGCTCCCATACGCCCCCTGGTGGTGAGTGTAAAGAAGACTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR TCA 90 bp CCAACAGCCACGACATTCAGCAATCTCAGTGTGACAAACAACACATCTGTAGCGGGAAATGCCAGCAGCTaGGGCTCGGCAGCCAACAGC +
Preference number: 4 (lower is better)
Translates to: PTATTFSNLSVTNNTSVAGNASS*GSAANS
Trigger: GCTGTTGGCTGCCGAGCCTCAGCTGCTGGCATTTCC...CGCTACAGATGTGTTGTTTGTCACACTGAGATTGCTGAATGTCGTGGCTGTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR TCA 90 bp ACGCCTCATTATTCCTGTAGCAGGAAGGGACGTCCAGACGGGACTCCAGAGGTGCTCCCAACAACTATCTaGCTCCATAGCTCATGCACC +
Preference number: 4 (lower is better)
Translates to: TPHYSCSRKGRPDGTPEVLPTTI*LHSSCT
Trigger: GGTGCATGAGCTATGGAGTCAGATAGTTGTTGGGAG...CACCTCTGGAGTCCCGTCTGGACGTCCCTTCCTGCTACAGGAATAATGAGGCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR TCA 90 bp GACTCCATAGCTCATGCACCCCAATTACAGCAGGTGTCGGGCTGGCATAAAGGCAATCCCAGCTACTCATaGGACCGAGGCAGGAGAATC +
Preference number: 4 (lower is better)
Translates to: DSIAHAPQLQQVSGWHKGNPSYS*DRGRRI
Trigger: GATTCTCCTGCCTCGGTCTCATGAGTAGCTGGGATT...GCCTTTATGCCAGCCCGACACCTGCTGTAATTGGGGTGCATGAGCTATGGAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413543.6
CDS-3UTR TCA 90 bp TCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATACCATCAAATATGGCTaGGCCTCTCGGCTCGTCCTG +
Preference number: 4 (lower is better)
Translates to: SELSSSKPNDEPKGLPHHTIKYG*ASRLVL
Trigger: CAGGACGAGCCGAGAGGCTCAGCCATATTTGATGGT...ATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512960.5
CDS-3UTR GCA 90 bp TCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCAGAATCCTCACTGCTaGTGGGAAGGCGACCTCGTT +
Preference number: 4 (lower is better)
Translates to: SELSSSKPNDEPKGLPHHQNPHC*WEGDLV
Trigger: AACGAGGTCGCCTTCCCAGCAGCAGTGAGGATTCTG...ATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp CATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCCAGGAGCTTCTCCTATaGTGGGATCGGGAATTCTGG +
Preference number: 4 (lower is better)
Translates to: HQSSPLANPMTSPKGFRIQELLL*WDREFW
Trigger: CCAGAATTCCCGATCCCAGCATAGGAGAAGCTCCTG...GATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp CCCACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGGGTCAGTTCCAGCCATaGAGCATCCATGTCATTGAG +
Preference number: 4 (lower is better)
Translates to: PTSELSSSKPNDEPKGLPGQFQP*SIHVIE
Trigger: CTCAATGACATGGATGCTGCATGGCTGGAACTGACC...CGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp CCCCCACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCAGAACACCATCTCATTaGCGTCCTCACCATCAGGAG +
Preference number: 4 (lower is better)
Translates to: PPHQSSPLANPMTSPKGFRTPSH*RPHHQE
Trigger: CTCCTGATGGTGAGGACGGCAATGAGATGGTGTTCT...GAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGTGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp ACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATTCTCTGGGCTGCCAATaGTCACCTCAGGGATCCACA +
Preference number: 4 (lower is better)
Translates to: TSELSSSKPNDEPKGLPHSLGCQ*SPQGST
Trigger: TGTGGATCCCTGAGGTGAGCATTGGCAGCCCAGAGA...ATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp CTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTCTGTTCTCTGGGCTGCCAATaGTCACCTCAGGGATCCACA +
Preference number: 4 (lower is better)
Translates to: LSSSKPNDEPKGLPHHLCSLGCQ*SPQGST
Trigger: TGTGGATCCCTGAGGTGAGCATTGGCAGCCCAGAGA...ACAGAGATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp TCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATTCTCTGGGCTGCCAATaGTCACCTCAGGGATCCACA +
Preference number: 4 (lower is better)
Translates to: SELSSSKPNDEPKGLPHHSLGCQ*SPQGST
Trigger: TGTGGATCCCTGAGGTGAGCATTGGCAGCCCAGAGA...ATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp GACTCCAGAGGTGATGGAAAGTGGGGGAGGCACAAAAGCAGCAAACAGCAGAAGCCATCTTCTCTGGGCTaGCAATGCTCACCTCAGGGA +
Preference number: 4 (lower is better)
Translates to: DSRGDGKWGRHKSSKQQKPSSLG*QCSPQG
Trigger: TCCCTGAGGTGAGCATTGGCAGCCCAGAGAAGATGG...CTTCTGCTGTTTGCTGCTTTTGTGCCTCCCCCACTTTCCATCACCTCTGGAGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR GCA 90 bp TCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCCATCTTCTCTGGGCTaGCAATGCTCACCTCAGGGA +
Preference number: 4 (lower is better)
Translates to: SELSSSKPNDEPKGLPHHPSSLG*QCSPQG
Trigger: TCCCTGAGGTGAGCATTGGCAGCCCAGAGAAGATGG...ATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp GAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTCCCCCAAACTTCTCATTaGAGAGGCTGCACACTAGCG +
Preference number: 4 (lower is better)
Translates to: ELSSSKPNDEPKGLPHHLPQTSH*RGCTLA
Trigger: CGCTAGTGTGCAGCCTCTGCAATGAGAAGTTTGGGG...GAGATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp GACTCCATAGCTCATGCACCCCAATTACAGCAGGTGTCGGGCTGGCATAAAGGCCCCCAAACTTCTCATTaGAGAGGCTGCACACTAGCG +
Preference number: 4 (lower is better)
Translates to: DSIAHAPQLQQVSGWHKGPQTSH*RGCTLA
Trigger: CGCTAGTGTGCAGCCTCTGCAATGAGAAGTTTGGGG...GCCTTTATGCCAGCCCGACACCTGCTGTAATTGGGGTGCATGAGCTATGGAGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR GCA 90 bp GAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTCTCACATGGAAGGCTGTaGGGCAGTTCTTCACAGAGC +
Preference number: 4 (lower is better)
Translates to: ELSSSKPNDEPKGLPHHLSHGRL*GSSSQS
Trigger: GCTCTGTGAAGAACTGCCGCACAGCCTTCCATGTGA...GAGATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp ACTGTTTCAGGCCACTTGGGTACCTTTCAGTGCAGACTGCTTCAGGCCAGAAAACCTGTGCAGCCCCCTTaGCAAGACTCTCCTCGGGTT +
Preference number: 4 (lower is better)
Translates to: TVSGHLGTFQCRLLQARKPVQPP*QDSPRV
Trigger: AACCCGAGGAGAGTCTTGGCAAGGGGGCTGCACAGG...TTTTCTGGCCTGAAGCAGTCTGCACTGAAAGGTACCCAAGTGGCCTGAAACAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR GCA 90 bp AGCAGGTGTCGGGCTGGCATAAAGGCTTCTTACCAGGATTCCAGTTTATCCTTCGGCCCCATTCTCCTGTaGAGCCCCCTTGCCAAGACT +
Preference number: 4 (lower is better)
Translates to: SRCRAGIKASYQDSSLSFGPILL*SPLAKT
Trigger: AGTCTTGGCAAGGGGGCTGCACAGGAGAATGGGGCC...GAAGGATAAACTGGAATCCTGGTAAGAAGCCTTTATGCCAGCCCGACACCTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR GCA 90 bp TCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATAACTGCTGCAGCTTCTaGTTACGGACACTCACCCGG +
Preference number: 4 (lower is better)
Translates to: SELSSSKPNDEPKGLPHHNCCSF*LRTLTR
Trigger: CCGGGTGAGTGTCCGTAAGCAGAAGCTGCAGCAGTT...ATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp ACGCCTCATTATTCCTGTAGCAGGAAGGGACGTCCAGACGGGACTCCAGAGGTGTCATCCTCCAACTGCTaGAGCTTCTGCTTACGGACA +
Preference number: 4 (lower is better)
Translates to: TPHYSCSRKGRPDGTPEVSSSNC*SFCLRT
Trigger: TGTCCGTAAGCAGAAGCTGCAGCAGTTGGAGGATGA...CACCTCTGGAGTCCCGTCTGGACGTCCCTTCCTGCTACAGGAATAATGAGGCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR GCA 90 bp CCCACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGTCATCCTCCAACTGCTaGAGCTTCTGCTTACGGACA +
Preference number: 4 (lower is better)
Translates to: PTSELSSSKPNDEPKGLPSSSNC*SFCLRT
Trigger: TGTCCGTAAGCAGAAGCTGCAGCAGTTGGAGGATGA...CGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp CCCACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGAACTCATCCTCCAACTaGTGCAGCTTCTGCTTACGG +
Preference number: 4 (lower is better)
Translates to: PTSELSSSKPNDEPKGLPNSSSN*CSFCLR
Trigger: CCGTAAGCAGAAGCTGCAGCAGTTGGAGGATGAGTT...CGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp TCTCCCCCACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCAACTCATCCTCCAACTaGTGCAGCTTCTGCTTACGG +
Preference number: 4 (lower is better)
Translates to: SPPHQSSPLANPMTSPKGNSSSN*CSFCLR
Trigger: CCGTAAGCAGAAGCTGCAGCAGTTGGAGGATGAGTT...GCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGTGGGGGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp CCACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCGCTTCAGCAGGGTTTTaGCTTCACTTCCAGGGCTAT +
Preference number: 4 (lower is better)
Translates to: PHQSSPLANPMTSPKGFRASAGF*LHFQGY
Trigger: ATAGCCCTGGAAGTGAAGGCAAAACCCTGCTGAAGC...GCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp ACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCCACACAGGTCTGGCTaGTTCAGCAGGGTTTTGCCT +
Preference number: 4 (lower is better)
Translates to: TSELSSSKPNDEPKGLPHPHRSG*FSRVLP
Trigger: AGGCAAAACCCTGCTGAAGCAGCCAGACCTGTGTGG...ATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp TCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCCACACAGGTCTGGCTaGTTCAGCAGGGTTTTGCCT +
Preference number: 4 (lower is better)
Translates to: SELSSSKPNDEPKGLPHHPHRSG*FSRVLP
Trigger: AGGCAAAACCCTGCTGAAGCAGCCAGACCTGTGTGG...ATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp TCCCCTGTGAATTACCCAAGAAACAAAGTGGGGGCCAGTGAGCAGCCGTGCTTACACATCAGCACCCACTaGCTGCTCTGCTCCATGACA +
Preference number: 4 (lower is better)
Translates to: SPVNYPRNKVGASEQPCLHISTH*LLCSMT
Trigger: TGTCATGGAGCAGAGCAGGCAGTGGGTGCTGATGTG...TAAGCACGGCTGCTCACTGGCCCCCACTTTGTTTCTTGGGTAATTCACAGGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR CCA 90 bp CAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCGAGGCACTCTCGGTCTaGCGTTTGGCTTGTTATGGA +
Preference number: 4 (lower is better)
Translates to: QSSPLANPMTSPKGFRIIEALSV*RLACYG
Trigger: TCCATAACAAGCCAAACGCCAGACCGAGAGTGCCTC...GATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000226319.11
CDS-3UTR CCA 90 bp CATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCAATCCTCACTGCTGCTaGGAAGGCGACCTCGTTTCA +
Preference number: 4 (lower is better)
Translates to: HQSSPLANPMTSPKGFRINPHCC*EGDLVS
Trigger: TGAAACGAGGTCGCCTTCCCAGCAGCAGTGAGGATT...GATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp CAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCGAGCTTCTCCTATGCTaGGATCGGGAATTCTGGGAC +
Preference number: 4 (lower is better)
Translates to: QSSPLANPMTSPKGFRIIELLLC*DREFWD
Trigger: GTCCCAGAATTCCCGATCCCAGCATAGGAGAAGCTC...GATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp TCCTCAGACAGATCTGACACCCCTGTCCACCAGGAATCCCACCCATACCCGCACTCACCATCAGGAGACTaGCAGACATCACAGACAACA +
Preference number: 4 (lower is better)
Translates to: SSDRSDTPVHQESHPYPHSPSGD*QTSQTT
Trigger: TGTTGTCTGTGATGTCTGCCAGTCTCCTGATGGTGA...GTGCGGGTATGGGTGGGATTCCTGGTGGACAGGGGTGTCAGATCTGTCTGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR CCA 90 bp CATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCAAAGCACAGGTCACATaGAAGGCTGTGCGGCAGTTC +
Preference number: 4 (lower is better)
Translates to: HQSSPLANPMTSPKGFRIKAQVT*KAVRQF
Trigger: GAACTGCCGCACAGCCTTCCATGTGACCTGTGCTTT...GATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp ACGCCTCATTATTCCTGTAGCAGGAAGGGACGTCCAGACGGGACTCCAGAGGTGCATCCTGCTCCCGCTTaGCTAGATTGTCCTCTTCAT +
Preference number: 4 (lower is better)
Translates to: TPHYSCSRKGRPDGTPEVHPAPA*LDCPLH
Trigger: ATGAAGAGGACAATCTAGCCAAGCGGGAGCAGGATG...CACCTCTGGAGTCCCGTCTGGACGTCCCTTCCTGCTACAGGAATAATGAGGCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR CCA 90 bp CCCACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGTCAAGTCCTCTATCTTaGGAGCATCAGGGCCAACAG +
Preference number: 4 (lower is better)
Translates to: PTSELSSSKPNDEPKGLPSSPLS*EHQGQQ
Trigger: CTGTTGGCCCTGATGCTCCCAAGATAGAGGACTTGA...CGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp CCACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCTCAAGTCCTCTATCTTaGGAGCATCAGGGCCAACAG +
Preference number: 4 (lower is better)
Translates to: PHQSSPLANPMTSPKGFRSSPLS*EHQGQQ
Trigger: CTGTTGGCCCTGATGCTCCCAAGATAGAGGACTTGA...GCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp CCCCCACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCTCTACCACACAGGTCTaGCTGCTTCAGCAGGGTTTT +
Preference number: 4 (lower is better)
Translates to: PPHQSSPLANPMTSPKGFSTTQV*LLQQGF
Trigger: AAAACCCTGCTGAAGCAGCCAGACCTGTGTGGTAGA...GAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGTGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp CTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTCTGTACCCAAAAAGCTCTCTaGGACCACCATCCCCTCCCT +
Preference number: 4 (lower is better)
Translates to: LSSSKPNDEPKGLPHHLCTQKAL*DHHPLP
Trigger: AGGGAGGGGATGGTGGTCCCAGAGAGCTTTTTGGGT...ACAGAGATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp CATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCTTGTCCAGATGCCTCTaGGACACATCTGTGGACCTG +
Preference number: 4 (lower is better)
Translates to: HQSSPLANPMTSPKGFRILSRCL*DTSVDL
Trigger: CAGGTCCACAGATGTGTCCCAGAGGCATCTGGACAA...GATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp AGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTCTCCGTTCCCCCTTCTTTaGAATCCGGAATCCTCCCCA +
Preference number: 4 (lower is better)
Translates to: SSPLANPMTSPKGFRIISPFPLL*NPESSP
Trigger: TGGGGAGGATTCCGGATTCCAAAGAAGGGGGAACGG...AGAGATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp CCACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCTTTTTGCCCTTTCCTTaGCTGGAACTCGGCCTAAGC +
Preference number: 4 (lower is better)
Translates to: PHQSSPLANPMTSPKGFRFLPFP*LELGLS
Trigger: GCTTAGGCCGAGTTCCAGCCAAGGAAAGGGCAAAAA...GCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp TCTCCCCCACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTGGCTCAAGAGCCAGTaGTTAGGGAAGAAGAAGGTC +
Preference number: 4 (lower is better)
Translates to: SPPHQSSPLANPMTSPKGWLKSQ*LGKKKV
Trigger: GACCTTCTTCTTCCCTAACCACTGGCTCTTGAGCCA...GCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGTGGGGGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp TCAGACAGATCTGACACCCCTGTCCACCAGGAATCCCACCCATACCCGCACACACACAACCTCATGCTGTaGTGTGTACAAGGGTCTGAG +
Preference number: 4 (lower is better)
Translates to: SDRSDTPVHQESHPYPHTHNLML*CVQGSE
Trigger: CTCAGACCCTTGTACACACCACAGCATGAGGTTGTG...TGTGTGCGGGTATGGGTGGGATTCCTGGTGGACAGGGGTGTCAGATCTGTCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR CCA 90 bp GGGACGTCCAGACGGGACTCCAGAGGTGATGGAAAGTGGGGGAGGCACAAAAGCAATCCTAACCTGGTCTaGGAAGGGGCATCACAAATA +
Preference number: 4 (lower is better)
Translates to: GTSRRDSRGDGKWGRHKSNPNLV*EGASQI
Trigger: TATTTGTGATGCCCCTTCCCAGACCAGGTTAGGATT...GCTTTTGTGCCTCCCCCACTTTCCATCACCTCTGGAGTCCCGTCTGGACGTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR CCA 90 bp CCCCCACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCAATGCCCAAGTTACTaGTGGGATAGTAACGCTGCG +
Preference number: 4 (lower is better)
Translates to: PPHQSSPLANPMTSPKGFQCPSY*WDSNAA
Trigger: CGCAGCGTTACTATCCCACCAGTAACTTGGGCATTG...GAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGTGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512960.5
CDS-3UTR CCA 90 bp TTCAGGCATTCCCATCTCCTTAAATTCTTCATTGGTCAGTTCCAGCCATGCAGCACAGCAGGCAGCCGGTaGGAGGGGAGAGAGGCTGCT +
Preference number: 4 (lower is better)
Translates to: FRHSHLLKFFIGQFQPCSTAGSR*EGREAA
Trigger: AGCAGCCTCTCTCCCCTCCCACCGGCTGCCTGCTGT...GCTGCATGGCTGGAACTGACCAATGAAGAATTTAAGGAGATGGGAATGCCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511925.5
CDS-3UTR TCA 90 bp TCCCCTGTGAATTACCCAAGAAACAAAGTGGGGGCCAGTGAGCAGCCGTGCTTATGCCCTCTGGTACCTTaGGGATTCCATAACAGGCCT +
Preference number: 4 (lower is better)
Translates to: SPVNYPRNKVGASEQPCLCPLVP*GFHNRP
Trigger: AGGCCTGTTATGGAATCCTCAAGGTACCAGAGGGCA...TAAGCACGGCTGCTCACTGGCCCCCACTTTGTTTCTTGGGTAATTCACAGGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR TCA 90 bp AGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTCTTGCCCTCTGGTACCTTaGGGATTCCATAACAGGCCT +
Preference number: 4 (lower is better)
Translates to: SSPLANPMTSPKGFRIISCPLVP*GFHNRP
Trigger: AGGCCTGTTATGGAATCCTCAAGGTACCAGAGGGCA...AGAGATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR TCA 90 bp GACTCCAGAGGTGATGGAAAGTGGGGGAGGCACAAAAGCAGCAAACAGCAGAAGTGCCCTCTGGTACCTTaGGGATTCCATAACAGGCCT +
Preference number: 4 (lower is better)
Translates to: DSRGDGKWGRHKSSKQQKCPLVP*GFHNRP
Trigger: AGGCCTGTTATGGAATCCTCAAGGTACCAGAGGGCA...CTTCTGCTGTTTGCTGCTTTTGTGCCTCCCCCACTTTCCATCACCTCTGGAGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR TCA 90 bp TCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATTGCCCTCTGGTACCTTaGGGATTCCATAACAGGCCT +
Preference number: 4 (lower is better)
Translates to: SELSSSKPNDEPKGLPHHCPLVP*GFHNRP
Trigger: AGGCCTGTTATGGAATCCTCAAGGTACCAGAGGGCA...ATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR TCA 90 bp CCACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCCAACATCCAGCAGGTTaGCGAAGGTGTAGAACTCAT +
Preference number: 4 (lower is better)
Translates to: PHQSSPLANPMTSPKGFRQHPAG*RRCRTH
Trigger: ATGAGTTCTACACCTTCGTCAACCTGCTGGATGTTG...GCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR TCA 90 bp CAGGGAAATCCCAAGCTGGCTCAAGAGCCAGTGGTTAGGGAAGAAGAAGGTCAAGGGTCACCATGTAAGTaGGGTTCCGAACCCTCTCCA +
Preference number: 4 (lower is better)
Translates to: QGNPKLAQEPVVREEEGQGSPCK*GSEPSP
Trigger: TGGAGAGGGTTCGGAACCTCACTTACATGGTGACCC...TTGACCTTCTTCTTCCCTAACCACTGGCTCTTGAGCCAGCTTGGGATTTCCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR TCA 90 bp AGCAGGTGTCGGGCTGGCATAAAGGCTTCTTACCAGGATTCCAGTTTATCCTTCGCCTGCTCTGCTCCATaGCAGTACTGGGAATTCCCC +
Preference number: 4 (lower is better)
Translates to: SRCRAGIKASYQDSSLSFACSAP*QYWEFP
Trigger: GGGGAATTCCCAGTACTGTCATGGAGCAGAGCAGGC...GAAGGATAAACTGGAATCCTGGTAAGAAGCCTTTATGCCAGCCCGACACCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR GCA 90 bp TCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTCTGTTCAGAATCCTCACTGCTaGTGGGAAGGCGACCTCGTT +
Preference number: 4 (lower is better)
Translates to: SPLANPMTSPKGFRIISVQNPHC*WEGDLV
Trigger: AACGAGGTCGCCTTCCCAGCAGCAGTGAGGATTCTG...AACAGAGATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp TGTACTATTGGAAGCCAGATGGCCAGGTATTGGCAATGGCCAGGGAAATCCCAACGTCAGAATCCTCACTaGTGCTGGGAAGGCGACCTC +
Preference number: 4 (lower is better)
Translates to: CTIGSQMARYWQWPGKSQRQNPH*CWEGDL
Trigger: GAGGTCGCCTTCCCAGCAGCAGTGAGGATTCTGACG...TTGGGATTTCCCTGGCCATTGCCAATACCTGGCCATCTGGCTTCCAATAGTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp TCTCCCCCACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCCTGTCTCCAGGGATCTaGCAACACATAGTACTCATC +
Preference number: 4 (lower is better)
Translates to: SPPHQSSPLANPMTSPKGLSPGI*QHIVLI
Trigger: GATGAGTACTATGTGTTGGCAGATCCCTGGAGACAG...GCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGTGGGGGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp CCCACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCTGTCTCCAGGGATCTaGCAACACATAGTACTCATC +
Preference number: 4 (lower is better)
Translates to: PTSELSSSKPNDEPKGLPLSPGI*QHIVLI
Trigger: GATGAGTACTATGTGTTGGCAGATCCCTGGAGACAG...CGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp GAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTCGGTCAGTTCCAGCCATaGAGCATCCATGTCATTGAG +
Preference number: 4 (lower is better)
Translates to: ELSSSKPNDEPKGLPHHLGQFQP*SIHVIE
Trigger: CTCAATGACATGGATGCTGCATGGCTGGAACTGACC...GAGATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp CAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCGGTCAGTTCCAGCCATaGAGCATCCATGTCATTGAG +
Preference number: 4 (lower is better)
Translates to: QSSPLANPMTSPKGFRIIGQFQP*SIHVIE
Trigger: CTCAATGACATGGATGCTGCATGGCTGGAACTGACC...GATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp CATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCAGAACACCATCTCATTaGCGTCCTCACCATCAGGAG +
Preference number: 4 (lower is better)
Translates to: HQSSPLANPMTSPKGFRIRTPSH*RPHHQE
Trigger: CTCCTGATGGTGAGGACGGCAATGAGATGGTGTTCT...GATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp TCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTCTGTTCCATCTTCTCTGGGCTaGCAATGCTCACCTCAGGGA +
Preference number: 4 (lower is better)
Translates to: SPLANPMTSPKGFRIISVPSSLG*QCSPQG
Trigger: TCCCTGAGGTGAGCATTGGCAGCCCAGAGAAGATGG...AACAGAGATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp CAGGGAAATCCCAAGCTGGCTCAAGAGCCAGTGGTTAGGGAAGAAGAAGGTCAACCATCTTCTCTGGGCTaGCAATGCTCACCTCAGGGA +
Preference number: 4 (lower is better)
Translates to: QGNPKLAQEPVVREEEGQPSSLG*QCSPQG
Trigger: TCCCTGAGGTGAGCATTGGCAGCCCAGAGAAGATGG...TTGACCTTCTTCTTCCCTAACCACTGGCTCTTGAGCCAGCTTGGGATTTCCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp GCCAACAGCCACGACATTCAGCAATCTCAGTGTGACAAACAACACATCTGTAGCCTAGCGCCCACCGGCTaGTGGGAATGTGTGACACCT +
Preference number: 4 (lower is better)
Translates to: ANSHDIQQSQCDKQHICSLAPTG*WECVTP
Trigger: AGGTGTCACACATTCCCAGCAGCCGGTGGGCGCTAG...GCTACAGATGTGTTGTTTGTCACACTGAGATTGCTGAATGTCGTGGCTGTTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR GCA 90 bp CTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTCTGTCCCCAAACTTCTCATTaGAGAGGCTGCACACTAGCG +
Preference number: 4 (lower is better)
Translates to: LSSSKPNDEPKGLPHHLCPQTSH*RGCTLA
Trigger: CGCTAGTGTGCAGCCTCTGCAATGAGAAGTTTGGGG...ACAGAGATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp AATCCCAAGCTGGCTCAAGAGCCAGTGGTTAGGGAAGAAGAAGGTCAAGTGGACAACTGCTGCAGCTTCTaGTTACGGACACTCACCCGG +
Preference number: 4 (lower is better)
Translates to: NPKLAQEPVVREEEGQVDNCCSF*LRTLTR
Trigger: CCGGGTGAGTGTCCGTAAGCAGAAGCTGCAGCAGTT...GTCCACTTGACCTTCTTCTTCCCTAACCACTGGCTCTTGAGCCAGCTTGGGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp GAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTCAACTCATCCTCCAACTaGTGCAGCTTCTGCTTACGG +
Preference number: 4 (lower is better)
Translates to: ELSSSKPNDEPKGLPHHLNSSSN*CSFCLR
Trigger: CCGTAAGCAGAAGCTGCAGCAGTTGGAGGATGAGTT...GAGATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp AGGAAATGCCAGCAGCTGAGGCTCGGCAGCCAACAGCCACGACATTCAGCAATCAGGTGCGTGAACAGCTaGAGCCTCCTAAATAAGACA +
Preference number: 4 (lower is better)
Translates to: RKCQQLRLGSQQPRHSAIRCVNS*SLLNKT
Trigger: TGTCTTATTTAGGAGGCTGCAGCTGTTCACGCACCT...GATTGCTGAATGTCGTGGCTGTTGGCTGCCGAGCCTCAGCTGCTGGCATTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR GCA 90 bp CCACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCCTTCCAGGGCTATTCTaGAAAGGATCTCGCTTATGG +
Preference number: 4 (lower is better)
Translates to: PHQSSPLANPMTSPKGFRLPGLF*KGSRLW
Trigger: CCATAAGCGAGATCCTTTGCAGAATAGCCCTGGAAG...GCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp GAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTCGCTTCAGCAGGGTTTTaGCTTCACTTCCAGGGCTAT +
Preference number: 4 (lower is better)
Translates to: ELSSSKPNDEPKGLPHHLASAGF*LHFQGY
Trigger: ATAGCCCTGGAAGTGAAGGCAAAACCCTGCTGAAGC...GAGATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp CCCACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGGGATTAATGGGTTTCTaGTTCTCCCCCACATCAGAG +
Preference number: 4 (lower is better)
Translates to: PTSELSSSKPNDEPKGLPGLMGF*FSPTSE
Trigger: CTCTGATGTGGGGGAGAAGCAGAAACCCATTAATCC...CGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp GACTCCATAGCTCATGCACCCCAATTACAGCAGGTGTCGGGCTGGCATAAAGGCTTGGGTACCTTTCAGTaGAGACTGCTTCAGGCCAGA +
Preference number: 4 (lower is better)
Translates to: DSIAHAPQLQQVSGWHKGLGTFQ*RLLQAR
Trigger: TCTGGCCTGAAGCAGTCTGCACTGAAAGGTACCCAA...GCCTTTATGCCAGCCCGACACCTGCTGTAATTGGGGTGCATGAGCTATGGAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR CCA 90 bp ACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATAATCCTCACTGCTGCTaGGAAGGCGACCTCGTTTCA +
Preference number: 4 (lower is better)
Translates to: TSELSSSKPNDEPKGLPHNPHCC*EGDLVS
Trigger: TGAAACGAGGTCGCCTTCCCAGCAGCAGTGAGGATT...ATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp TCCCCTGTGAATTACCCAAGAAACAAAGTGGGGGCCAGTGAGCAGCCGTGCTTAAATCCTCACTGCTGCTaGGAAGGCGACCTCGTTTCA +
Preference number: 4 (lower is better)
Translates to: SPVNYPRNKVGASEQPCLNPHCC*EGDLVS
Trigger: TGAAACGAGGTCGCCTTCCCAGCAGCAGTGAGGATT...TAAGCACGGCTGCTCACTGGCCCCCACTTTGTTTCTTGGGTAATTCACAGGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR CCA 90 bp GACTCCAGAGGTGATGGAAAGTGGGGGAGGCACAAAAGCAGCAAACAGCAGAAGGAGCTTCTCCTATGCTaGGATCGGGAATTCTGGGAC +
Preference number: 4 (lower is better)
Translates to: DSRGDGKWGRHKSSKQQKELLLC*DREFWD
Trigger: GTCCCAGAATTCCCGATCCCAGCATAGGAGAAGCTC...CTTCTGCTGTTTGCTGCTTTTGTGCCTCCCCCACTTTCCATCACCTCTGGAGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR CCA 90 bp ACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATGAGCTTCTCCTATGCTaGGATCGGGAATTCTGGGAC +
Preference number: 4 (lower is better)
Translates to: TSELSSSKPNDEPKGLPHELLLC*DREFWD
Trigger: GTCCCAGAATTCCCGATCCCAGCATAGGAGAAGCTC...ATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp AGCAGGTGTCGGGCTGGCATAAAGGCTTCTTACCAGGATTCCAGTTTATCCTTCCTTCAGACACAACCCTaGCCACAGGCTGAGGGATGG +
Preference number: 4 (lower is better)
Translates to: SRCRAGIKASYQDSSLSFLQTQP*PQAEGW
Trigger: CCATCCCTCAGCCTGTGGCCAGGGTTGTGTCTGAAG...GAAGGATAAACTGGAATCCTGGTAAGAAGCCTTTATGCCAGCCCGACACCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR CCA 90 bp TGTACTATTGGAAGCCAGATGGCCAGGTATTGGCAATGGCCAGGGAAATCCCAACTTCAGACACAACCCTaGCCACAGGCTGAGGGATGG +
Preference number: 4 (lower is better)
Translates to: CTIGSQMARYWQWPGKSQLQTQP*PQAEGW
Trigger: CCATCCCTCAGCCTGTGGCCAGGGTTGTGTCTGAAG...TTGGGATTTCCCTGGCCATTGCCAATACCTGGCCATCTGGCTTCCAATAGTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226319.11
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp TCTCCCCCACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTCACCATCAGGAGACTaGCAGACATCACAGACAACA +
Preference number: 4 (lower is better)
Translates to: SPPHQSSPLANPMTSPKGSPSGD*QTSQTT
Trigger: TGTTGTCTGTGATGTCTGCCAGTCTCCTGATGGTGA...GCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGTGGGGGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp ACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATAGAGCACAGCTAACGTaGACCCACTTGGTTCCGCTA +
Preference number: 4 (lower is better)
Translates to: TSELSSSKPNDEPKGLPHRAQLT*THLVPL
Trigger: TAGCGGAACCAAGTGGGTCCACGTTAGCTGTGCTCT...ATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp AGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTCTAGAGCACAGCTAACGTaGACCCACTTGGTTCCGCTA +
Preference number: 4 (lower is better)
Translates to: SSPLANPMTSPKGFRIISRAQLT*THLVPL
Trigger: TAGCGGAACCAAGTGGGTCCACGTTAGCTGTGCTCT...AGAGATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp TCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATAGAGCACAGCTAACGTaGACCCACTTGGTTCCGCTA +
Preference number: 4 (lower is better)
Translates to: SELSSSKPNDEPKGLPHHRAQLT*THLVPL
Trigger: TAGCGGAACCAAGTGGGTCCACGTTAGCTGTGCTCT...ATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp AGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTCTAAAGCACAGGTCACATaGAAGGCTGTGCGGCAGTTC +
Preference number: 4 (lower is better)
Translates to: SSPLANPMTSPKGFRIISKAQVT*KAVRQF
Trigger: GAACTGCCGCACAGCCTTCCATGTGACCTGTGCTTT...AGAGATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp ACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATAAAGCACAGGTCACATaGAAGGCTGTGCGGCAGTTC +
Preference number: 4 (lower is better)
Translates to: TSELSSSKPNDEPKGLPHKAQVT*KAVRQF
Trigger: GAACTGCCGCACAGCCTTCCATGTGACCTGTGCTTT...ATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp CTGAGAGTATATGACTGGCTATCATTTCTTGCTCTGGGCGAGCGTTCGCCTCTTGGTTCTGCTCAAGGCTaGCAAAGGGCTCCAGCGGAT +
Preference number: 4 (lower is better)
Translates to: LRVYDWLSFLALGERSPLGSAQG*QRAPAD
Trigger: ATCCGCTGGAGCCCTTTGCCAGCCTTGAGCAGAACC...AAGAGGCGAACGCTCGCCCAGAGCAAGAAATGATAGCCAGTCATATACTCTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR CCA 90 bp CAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCCATCCTGCTCCCGCTTaGCTAGATTGTCCTCTTCAT +
Preference number: 4 (lower is better)
Translates to: QSSPLANPMTSPKGFRIIHPAPA*LDCPLH
Trigger: ATGAAGAGGACAATCTAGCCAAGCGGGAGCAGGATG...GATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp GAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTCCATCCTGCTCCCGCTTaGCTAGATTGTCCTCTTCAT +
Preference number: 4 (lower is better)
Translates to: ELSSSKPNDEPKGLPHHLHPAPA*LDCPLH
Trigger: ATGAAGAGGACAATCTAGCCAAGCGGGAGCAGGATG...GAGATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp CATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCCATCCTGCTCCCGCTTaGCTAGATTGTCCTCTTCAT +
Preference number: 4 (lower is better)
Translates to: HQSSPLANPMTSPKGFRIHPAPA*LDCPLH
Trigger: ATGAAGAGGACAATCTAGCCAAGCGGGAGCAGGATG...GATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp CCACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCTCTCTTCTTTTCCCATaGTCTGGCATCACCACACCA +
Preference number: 4 (lower is better)
Translates to: PHQSSPLANPMTSPKGFRSLLFP*SGITTP
Trigger: TGGTGTGGTGATGCCAGACCATGGGAAAAGAAGAGA...GCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp TCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATGGGAGCCATTGCACTTaGGCACTATCTCCTTCCTTG +
Preference number: 4 (lower is better)
Translates to: SELSSSKPNDEPKGLPHHGSHCT*ALSPSL
Trigger: CAAGGAAGGAGATAGTGCCCAAGTGCAATGGCTCCC...ATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp ACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATGGGAGCCATTGCACTTaGGCACTATCTCCTTCCTTG +
Preference number: 4 (lower is better)
Translates to: TSELSSSKPNDEPKGLPHGSHCT*ALSPSL
Trigger: CAAGGAAGGAGATAGTGCCCAAGTGCAATGGCTCCC...ATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp ACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATTCCCCAGTTTTTCACTaGGCTGGCAGGTGTTGTAGG +
Preference number: 4 (lower is better)
Translates to: TSELSSSKPNDEPKGLPHSPVFH*AGRCCR
Trigger: CCTACAACACCTGCCAGCCCAGTGAAAAACTGGGGA...ATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp AGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTCTCAGATGGCCAGGTATTaGCAATGGCCAGGGAAATCC +
Preference number: 4 (lower is better)
Translates to: SSPLANPMTSPKGFRIISQMARY*QWPGKS
Trigger: GGATTTCCCTGGCCATTGCCAATACCTGGCCATCTG...AGAGATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp ACAAAACTGCTCCAGGATCCTGCCTCTTCCAGGGCCGGAATCCGCGGCCTTCCCCTGAGAGTATATGACTaGCTATCATTTCTTGCTCTG +
Preference number: 4 (lower is better)
Translates to: TKLLQDPASSRAGIRGLPLRVYD*LSFLAL
Trigger: CAGAGCAAGAAATGATAGCCAGTCATATACTCTCAG...GGGAAGGCCGCGGATTCCGGCCCTGGAAGAGGCAGGATCCTGGAGCAGTTTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR CCA 90 bp TCCTCAGACAGATCTGACACCCCTGTCCACCAGGAATCCCACCCATACCCGCACCCATCACAGGCATCATaGCAAATTTTGGGTAGCGTA +
Preference number: 4 (lower is better)
Translates to: SSDRSDTPVHQESHPYPHPSQAS*QILGSV
Trigger: TACGCTACCCAAAATTTGCCATGATGCCTGTGATGG...GTGCGGGTATGGGTGGGATTCCTGGTGGACAGGGGTGTCAGATCTGTCTGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413543.6
CDS-3UTR CCA 90 bp TGTACTATTGGAAGCCAGATGGCCAGGTATTGGCAATGGCCAGGGAAATCCCAATGTACTTCTTGGGCCTaGCCACAGGCTGAGGGATGG +
Preference number: 4 (lower is better)
Translates to: CTIGSQMARYWQWPGKSQCTSWA*PQAEGW
Trigger: CCATCCCTCAGCCTGTGGCCAGGCCCAAGAAGTACA...TTGGGATTTCCCTGGCCATTGCCAATACCTGGCCATCTGGCTTCCAATAGTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452328.6
CDS-3UTR TCA 90 bp AGCAGGTGTCGGGCTGGCATAAAGGCTTCTTACCAGGATTCCAGTTTATCCTTCCTGGGACCAAGTAGTTaGCAGGCTGCCATTGTCGTC +
Preference number: 4 (lower is better)
Translates to: SRCRAGIKASYQDSSLSFLGPSS*QAAIVV
Trigger: GACGACAATGGCAGCCTGTCAACTACTTGGTCCCAG...GAAGGATAAACTGGAATCCTGGTAAGAAGCCTTTATGCCAGCCCGACACCTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR TCA 90 bp GACAGTACTGGGAATTCCCCTGTGAATTACCCAAGAAACAAAGTGGGGGCCAGTCTGGGACCAAGTAGTTaGCAGGCTGCCATTGTCGTC +
Preference number: 4 (lower is better)
Translates to: DSTGNSPVNYPRNKVGASLGPSS*QAAIVV
Trigger: GACGACAATGGCAGCCTGTCAACTACTTGGTCCCAG...ACTGGCCCCCACTTTGTTTCTTGGGTAATTCACAGGGGAATTCCCAGTACTGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR TCA 90 bp AGGAAATGCCAGCAGCTGAGGCTCGGCAGCCAACAGCCACGACATTCAGCAATCTGTCCTAAACACCTCTaGAGGCTTTCGATCTTCATG +
Preference number: 4 (lower is better)
Translates to: RKCQQLRLGSQQPRHSAICPKHL*RLSIFM
Trigger: CATGAAGATCGAAAGCCTTCAGAGGTGTTTAGGACA...GATTGCTGAATGTCGTGGCTGTTGGCTGCCGAGCCTCAGCTGCTGGCATTTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR TCA 90 bp CCCACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGTGTCCTAAACACCTCTaGAGGCTTTCGATCTTCATG +
Preference number: 4 (lower is better)
Translates to: PTSELSSSKPNDEPKGLPCPKHL*RLSIFM
Trigger: CATGAAGATCGAAAGCCTTCAGAGGTGTTTAGGACA...CGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR TCA 90 bp AATCCCAAGCTGGCTCAAGAGCCAGTGGTTAGGGAAGAAGAAGGTCAAGTGGACCAGCATCCATGTCATTaGGGTCATAGCGACACACGC +
Preference number: 4 (lower is better)
Translates to: NPKLAQEPVVREEEGQVDQHPCH*GHSDTR
Trigger: GCGTGTGTCGCTATGACCTCAATGACATGGATGCTG...GTCCACTTGACCTTCTTCTTCCCTAACCACTGGCTCTTGAGCCAGCTTGGGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR TCA 90 bp GGCCACTTGGGTACCTTTCAGTGCAGACTGCTTCAGGCCAGAAAACCTCACTCCCAACATCCAGCAGGTTaGCGAAGGTGTAGAACTCAT +
Preference number: 4 (lower is better)
Translates to: GHLGTFQCRLLQARKPHSQHPAG*RRCRTH
Trigger: ATGAGTTCTACACCTTCGTCAACCTGCTGGATGTTG...GGAGTGAGGTTTTCTGGCCTGAAGCAGTCTGCACTGAAAGGTACCCAAGTGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR TCA 90 bp TCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATAAGCATGTTTTCCAGTaGGGAGGAGGAGCAGGAAGA +
Preference number: 4 (lower is better)
Translates to: SELSSSKPNDEPKGLPHHKHVFQ*GGGAGR
Trigger: TCTTCCTGCTCCTCCTCCTCACTGGAAAACATGCTT...ATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR TCA 90 bp AGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTCTAAGCATGTTTTCCAGTaGGGAGGAGGAGCAGGAAGA +
Preference number: 4 (lower is better)
Translates to: SSPLANPMTSPKGFRIISKHVFQ*GGGAGR
Trigger: TCTTCCTGCTCCTCCTCCTCACTGGAAAACATGCTT...AGAGATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR TCA 90 bp CCCACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGGGCTTTTTCAGCGAATaGACCAAGGAAGTACCCATT +
Preference number: 4 (lower is better)
Translates to: PTSELSSSKPNDEPKGLPGFFSE*TKEVPI
Trigger: AATGGGTACTTCCTTGGTTCATTCGCTGAAAAAGCC...CGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR TCA 90 bp CCACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCGGCTTTTTCAGCGAATaGACCAAGGAAGTACCCATT +
Preference number: 4 (lower is better)
Translates to: PHQSSPLANPMTSPKGFRGFFSE*TKEVPI
Trigger: AATGGGTACTTCCTTGGTTCATTCGCTGAAAAAGCC...GCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR TCA 90 bp CAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTCTGTTGTGCTGATATaGGACGTGCTTCTGCAAAGG +
Preference number: 4 (lower is better)
Translates to: QSSPLANPMTSPKGFRIISVVLI*DVLLQR
Trigger: CCTTTGCAGAAGCACGTCTCATATCAGCACAACAGA...GATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR TCA 90 bp GAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTCTCTGTTGTGCTGATATaGGACGTGCTTCTGCAAAGG +
Preference number: 4 (lower is better)
Translates to: ELSSSKPNDEPKGLPHHLSVVLI*DVLLQR
Trigger: CCTTTGCAGAAGCACGTCTCATATCAGCACAACAGA...GAGATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR TCA 90 bp CTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTCTGTTCTGCAGCAACAAGCTaGTCTGGACAGCAGTCTTTC +
Preference number: 4 (lower is better)
Translates to: LSSSKPNDEPKGLPHHLCSAATS*SGQQSF
Trigger: GAAAGACTGCTGTCCAGATCAGCTTGTTGCTGCAGA...ACAGAGATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR TCA 90 bp ACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATTCTGCAGCAACAAGCTaGTCTGGACAGCAGTCTTTC +
Preference number: 4 (lower is better)
Translates to: TSELSSSKPNDEPKGLPHSAATS*SGQQSF
Trigger: GAAAGACTGCTGTCCAGATCAGCTTGTTGCTGCAGA...ATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR TCA 90 bp TCAGACAGATCTGACACCCCTGTCCACCAGGAATCCCACCCATACCCGCACACAGTGTGTACAAGGGTCTaGGAGTATATGACTGGCTAT +
Preference number: 4 (lower is better)
Translates to: SDRSDTPVHQESHPYPHTVCTRV*EYMTGY
Trigger: ATAGCCAGTCATATACTCTCAGACCCTTGTACACAC...TGTGTGCGGGTATGGGTGGGATTCCTGGTGGACAGGGGTGTCAGATCTGTCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR TCA 90 bp GTGTCGGGCTGGCATAAAGGCTTCTTACCAGGATTCCAGTTTATCCTTCTCAATCAAAGTGGGGGCCAGTaGGCAGCCGTGCTTAGCTTC +
Preference number: 4 (lower is better)
Translates to: VSGWHKGFLPGFQFILLNQSGGQ*AAVLSF
Trigger: GAAGCTAAGCACGGCTGCTCACTGGCCCCCACTTTG...ATTGAGAAGGATAAACTGGAATCCTGGTAAGAAGCCTTTATGCCAGCCCGACAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR GCA 90 bp GCCAACAGCCACGACATTCAGCAATCTCAGTGTGACAAACAACACATCTGTAGCCGTCAGAATCCTCACTaGTGCTGGGAAGGCGACCTC +
Preference number: 4 (lower is better)
Translates to: ANSHDIQQSQCDKQHICSRQNPH*CWEGDL
Trigger: GAGGTCGCCTTCCCAGCAGCAGTGAGGATTCTGACG...GCTACAGATGTGTTGTTTGTCACACTGAGATTGCTGAATGTCGTGGCTGTTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR GCA 90 bp GGCATTCCCATCTCCTTAAATTCTTCATTGGTCAGTTCCAGCCATGCAGCATCCCGTCAGAATCCTCACTaGTGCTGGGAAGGCGACCTC +
Preference number: 4 (lower is better)
Translates to: GIPISLNSSLVSSSHAASRQNPH*CWEGDL
Trigger: GAGGTCGCCTTCCCAGCAGCAGTGAGGATTCTGACG...GGATGCTGCATGGCTGGAACTGACCAATGAAGAATTTAAGGAGATGGGAATGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511925.5
CDS-3UTR GCA 90 bp CAGGGAAATCCCAAGCTGGCTCAAGAGCCAGTGGTTAGGGAAGAAGAAGGTCAACAGGAGCTTCTCCTATaGTGGGATCGGGAATTCTGG +
Preference number: 4 (lower is better)
Translates to: QGNPKLAQEPVVREEEGQQELLL*WDREFW
Trigger: CCAGAATTCCCGATCCCAGCATAGGAGAAGCTCCTG...TTGACCTTCTTCTTCCCTAACCACTGGCTCTTGAGCCAGCTTGGGATTTCCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp CATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCCTGTCTCCAGGGATCTaGCAACACATAGTACTCATC +
Preference number: 4 (lower is better)
Translates to: HQSSPLANPMTSPKGFRILSPGI*QHIVLI
Trigger: GATGAGTACTATGTGTTGGCAGATCCCTGGAGACAG...GATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp TGTACTATTGGAAGCCAGATGGCCAGGTATTGGCAATGGCCAGGGAAATCCCAACCATCTTCTCTGGGCTaGCAATGCTCACCTCAGGGA +
Preference number: 4 (lower is better)
Translates to: CTIGSQMARYWQWPGKSQPSSLG*QCSPQG
Trigger: TCCCTGAGGTGAGCATTGGCAGCCCAGAGAAGATGG...TTGGGATTTCCCTGGCCATTGCCAATACCTGGCCATCTGGCTTCCAATAGTACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp AATCCCAAGCTGGCTCAAGAGCCAGTGGTTAGGGAAGAAGAAGGTCAAGTGGACCCCCAAACTTCTCATTaGAGAGGCTGCACACTAGCG +
Preference number: 4 (lower is better)
Translates to: NPKLAQEPVVREEEGQVDPQTSH*RGCTLA
Trigger: CGCTAGTGTGCAGCCTCTGCAATGAGAAGTTTGGGG...GTCCACTTGACCTTCTTCTTCCCTAACCACTGGCTCTTGAGCCAGCTTGGGATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp CTGAGAGTATATGACTGGCTATCATTTCTTGCTCTGGGCGAGCGTTCGCCTCTTAACTGCTGCAGCTTCTaGTTACGGACACTCACCCGG +
Preference number: 4 (lower is better)
Translates to: LRVYDWLSFLALGERSPLNCCSF*LRTLTR
Trigger: CCGGGTGAGTGTCCGTAAGCAGAAGCTGCAGCAGTT...AAGAGGCGAACGCTCGCCCAGAGCAAGAAATGATAGCCAGTCATATACTCTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR GCA 90 bp AGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTCTTCATCCTCCAACTGCTaGAGCTTCTGCTTACGGACA +
Preference number: 4 (lower is better)
Translates to: SSPLANPMTSPKGFRIISSSSNC*SFCLRT
Trigger: TGTCCGTAAGCAGAAGCTGCAGCAGTTGGAGGATGA...AGAGATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp CTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTCTGTTCATCCTCCAACTGCTaGAGCTTCTGCTTACGGACA +
Preference number: 4 (lower is better)
Translates to: LSSSKPNDEPKGLPHHLCSSSNC*SFCLRT
Trigger: TGTCCGTAAGCAGAAGCTGCAGCAGTTGGAGGATGA...ACAGAGATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp ACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATAACTCATCCTCCAACTaGTGCAGCTTCTGCTTACGG +
Preference number: 4 (lower is better)
Translates to: TSELSSSKPNDEPKGLPHNSSSN*CSFCLR
Trigger: CCGTAAGCAGAAGCTGCAGCAGTTGGAGGATGAGTT...ATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp CCCACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCTAAATAAGACATCCTaGTCCCGCTTGGCTAGATTG +
Preference number: 4 (lower is better)
Translates to: PTSELSSSKPNDEPKGLPLNKTS*SRLARL
Trigger: CAATCTAGCCAAGCGGGAGCAGGATGTCTTATTTAG...CGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp AGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTCTGCTTCAGCAGGGTTTTaGCTTCACTTCCAGGGCTAT +
Preference number: 4 (lower is better)
Translates to: SSPLANPMTSPKGFRIISASAGF*LHFQGY
Trigger: ATAGCCCTGGAAGTGAAGGCAAAACCCTGCTGAAGC...AGAGATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp CAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCCCTAAATCTCCATATTaGAGCAGCTCTACCCTGTCC +
Preference number: 4 (lower is better)
Translates to: QSSPLANPMTSPKGFRIIPKSPY*SSSTLS
Trigger: GGACAGGGTAGAGCTGCTGCAATATGGAGATTTAGG...GATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp CCACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCCAAGCAGCAGGACCTTaGCATATTACCCTAAATCTC +
Preference number: 4 (lower is better)
Translates to: PHQSSPLANPMTSPKGFRQAAGP*HITLNL
Trigger: GAGATTTAGGGTAATATGGCAAGGTCCTGCTGCTTG...GCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp CCCCCACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCAGATTCCCTAACATATaGACTAGTGGTTGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: PPHQSSPLANPMTSPKGFRFPNI*TSGWLW
Trigger: CCAGAGCCAACCACTAGTGCATATGTTAGGGAATCT...GAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGTGGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp GCAGCCAACAGCCACGACATTCAGCAATCTCAGTGTGACAAACAACACATCTGTGGAGGGGAGAGAGGCTaGTATTTAAACGCCCGCGGA +
Preference number: 4 (lower is better)
Translates to: AANSHDIQQSQCDKQHICGGERG*YLNARG
Trigger: TCCGCGGGCGTTTAAATAGCAGCCTCTCTCCCCTCC...ACAGATGTGTTGTTTGTCACACTGAGATTGCTGAATGTCGTGGCTGTTGGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413543.6
CDS-3UTR GCA 90 bp ATGCACCCCAATTACAGCAGGTGTCGGGCTGGCATAAAGGCTTCTTACCAGGATGCCAGTGAGCAGCCGTaGTTAGCTTCCTTCATAAGC +
Preference number: 4 (lower is better)
Translates to: MHPNYSRCRAGIKASYQDASEQP*LASFIS
Trigger: GCTTATGAAGGAAGCTAAGCACGGCTGCTCACTGGC...ATCCTGGTAAGAAGCCTTTATGCCAGCCCGACACCTGCTGTAATTGGGGTGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR GCA 90 bp GCAGCCAACAGCCACGACATTCAGCAATCTCAGTGTGACAAACAACACATCTGTACTGCTCCAGGATCCTaGCTCTTCCAGGGCCGGAAT +
Preference number: 4 (lower is better)
Translates to: AANSHDIQQSQCDKQHICTAPGS*LFQGRN
Trigger: ATTCCGGCCCTGGAAGAGGCAGGATCCTGGAGCAGT...ACAGATGTGTTGTTTGTCACACTGAGATTGCTGAATGTCGTGGCTGTTGGCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR GCA 90 bp CCAACAGCCACGACATTCAGCAATCTCAGTGTGACAAACAACACATCTGTAGCGACTGCTCCAGGATCCTaGCTCTTCCAGGGCCGGAAT +
Preference number: 4 (lower is better)
Translates to: PTATTFSNLSVTNNTSVATAPGS*LFQGRN
Trigger: ATTCCGGCCCTGGAAGAGGCAGGATCCTGGAGCAGT...CGCTACAGATGTGTTGTTTGTCACACTGAGATTGCTGAATGTCGTGGCTGTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR CCA 90 bp CTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTCTGTTGGGATCGGGAATTCTaGGACCAAGTAGTTGACAGG +
Preference number: 4 (lower is better)
Translates to: LSSSKPNDEPKGLPHHLCWDREF*DQVVDR
Trigger: CCTGTCAACTACTTGGTCCCAGAATTCCCGATCCCA...ACAGAGATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp ACGCCTCATTATTCCTGTAGCAGGAAGGGACGTCCAGACGGGACTCCAGAGGTGTTCGATCTTCATGTCTaGAGCAGGAGCTTCTCCTAT +
Preference number: 4 (lower is better)
Translates to: TPHYSCSRKGRPDGTPEVFDLHV*SRSFSY
Trigger: ATAGGAGAAGCTCCTGCTCCAGACATGAAGATCGAA...CACCTCTGGAGTCCCGTCTGGACGTCCCTTCCTGCTACAGGAATAATGAGGCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR CCA 90 bp CCCACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCTAGGACCCTCTCCATaGTGTATTCATCTAGTTCAG +
Preference number: 4 (lower is better)
Translates to: PTSELSSSKPNDEPKGLPLGPSP*CIHLVQ
Trigger: CTGAACTAGATGAATACACCATGGAGAGGGTCCTAG...CGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp TCTCCCCCACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCCTAGGACCCTCTCCATaGTGTATTCATCTAGTTCAG +
Preference number: 4 (lower is better)
Translates to: SPPHQSSPLANPMTSPKGLGPSP*CIHLVQ
Trigger: CTGAACTAGATGAATACACCATGGAGAGGGTCCTAG...GCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGTGGGGGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp CATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCTCACCATCAGGAGACTaGCAGACATCACAGACAACA +
Preference number: 4 (lower is better)
Translates to: HQSSPLANPMTSPKGFRISPSGD*QTSQTT
Trigger: TGTTGTCTGTGATGTCTGCCAGTCTCCTGATGGTGA...GATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp AAGGAAATGCCAGCAGCTGAGGCTCGGCAGCCAACAGCCACGACATTCAGCAATTCACCATCAGGAGACTaGCAGACATCACAGACAACA +
Preference number: 4 (lower is better)
Translates to: KEMPAAEARQPTATTFSNSPSGD*QTSQTT
Trigger: TGTTGTCTGTGATGTCTGCCAGTCTCCTGATGGTGA...ATTGCTGAATGTCGTGGCTGTTGGCTGCCGAGCCTCAGCTGCTGGCATTTCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR CCA 90 bp CAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTCACCATCAGGAGACTaGCAGACATCACAGACAACA +
Preference number: 4 (lower is better)
Translates to: QSSPLANPMTSPKGFRIISPSGD*QTSQTT
Trigger: TGTTGTCTGTGATGTCTGCCAGTCTCCTGATGGTGA...GATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp GAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTCTCACCATCAGGAGACTaGCAGACATCACAGACAACA +
Preference number: 4 (lower is better)
Translates to: ELSSSKPNDEPKGLPHHLSPSGD*QTSQTT
Trigger: TGTTGTCTGTGATGTCTGCCAGTCTCCTGATGGTGA...GAGATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp ATGCACCCCAATTACAGCAGGTGTCGGGCTGGCATAAAGGCTTCTTACCAGGATAAAGCACAGGTCACATaGAAGGCTGTGCGGCAGTTC +
Preference number: 4 (lower is better)
Translates to: MHPNYSRCRAGIKASYQDKAQVT*KAVRQF
Trigger: GAACTGCCGCACAGCCTTCCATGTGACCTGTGCTTT...ATCCTGGTAAGAAGCCTTTATGCCAGCCCGACACCTGCTGTAATTGGGGTGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR CCA 90 bp GTCCCATATCCACAACCCACTCACAGGCTTCAAGCAGCAGGACCTTGCCATATTAAAGCACAGGTCACATaGAAGGCTGTGCGGCAGTTC +
Preference number: 4 (lower is better)
Translates to: VPYPQPTHRLQAAGPCHIKAQVT*KAVRQF
Trigger: GAACTGCCGCACAGCCTTCCATGTGACCTGTGCTTT...AATATGGCAAGGTCCTGCTGCTTGAAGCCTGTGAGTGGGTTGTGGATATGGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp CCCCCACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCTCTTCATCTTTCTTTaGGGTGATCAGGGGCTTGTT +
Preference number: 4 (lower is better)
Translates to: PPHQSSPLANPMTSPKGFLFIFL*GDQGLV
Trigger: AACAAGCCCCTGATCACCCCAAAGAAAGATGAAGAG...GAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGTGGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp CTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTCTGTCATCCTGCTCCCGCTTaGCTAGATTGTCCTCTTCAT +
Preference number: 4 (lower is better)
Translates to: LSSSKPNDEPKGLPHHLCHPAPA*LDCPLH
Trigger: ATGAAGAGGACAATCTAGCCAAGCGGGAGCAGGATG...ACAGAGATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp AGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTCTTCTACCACACAGGTCTaGCTGCTTCAGCAGGGTTTT +
Preference number: 4 (lower is better)
Translates to: SSPLANPMTSPKGFRIISSTTQV*LLQQGF
Trigger: AAAACCCTGCTGAAGCAGCCAGACCTGTGTGGTAGA...AGAGATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp ACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATTCTACCACACAGGTCTaGCTGCTTCAGCAGGGTTTT +
Preference number: 4 (lower is better)
Translates to: TSELSSSKPNDEPKGLPHSTTQV*LLQQGF
Trigger: AAAACCCTGCTGAAGCAGCCAGACCTGTGTGGTAGA...ATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp GAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTCTCTCTTCTTTTCCCATaGTCTGGCATCACCACACCA +
Preference number: 4 (lower is better)
Translates to: ELSSSKPNDEPKGLPHHLSLLFP*SGITTP
Trigger: TGGTGTGGTGATGCCAGACCATGGGAAAAGAAGAGA...GAGATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp CAGGGAAATCCCAAGCTGGCTCAAGAGCCAGTGGTTAGGGAAGAAGAAGGTCAAGGGAGCCATTGCACTTaGGCACTATCTCCTTCCTTG +
Preference number: 4 (lower is better)
Translates to: QGNPKLAQEPVVREEEGQGSHCT*ALSPSL
Trigger: CAAGGAAGGAGATAGTGCCCAAGTGCAATGGCTCCC...TTGACCTTCTTCTTCCCTAACCACTGGCTCTTGAGCCAGCTTGGGATTTCCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp GTCCCATATCCACAACCCACTCACAGGCTTCAAGCAGCAGGACCTTGCCATATTTCCCCAGTTTTTCACTaGGCTGGCAGGTGTTGTAGG +
Preference number: 4 (lower is better)
Translates to: VPYPQPTHRLQAAGPCHISPVFH*AGRCCR
Trigger: CCTACAACACCTGCCAGCCCAGTGAAAAACTGGGGA...AATATGGCAAGGTCCTGCTGCTTGAAGCCTGTGAGTGGGTTGTGGATATGGGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp TCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTCTGTTTCCCCAGTTTTTCACTaGGCTGGCAGGTGTTGTAGG +
Preference number: 4 (lower is better)
Translates to: SPLANPMTSPKGFRIISVSPVFH*AGRCCR
Trigger: CCTACAACACCTGCCAGCCCAGTGAAAAACTGGGGA...AACAGAGATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp ACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATTTTTTGCCCTTTCCTTaGCTGGAACTCGGCCTAAGC +
Preference number: 4 (lower is better)
Translates to: TSELSSSKPNDEPKGLPHFLPFP*LELGLS
Trigger: GCTTAGGCCGAGTTCCAGCCAAGGAAAGGGCAAAAA...ATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp CTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTCTGTTTTTTGCCCTTTCCTTaGCTGGAACTCGGCCTAAGC +
Preference number: 4 (lower is better)
Translates to: LSSSKPNDEPKGLPHHLCFLPFP*LELGLS
Trigger: GCTTAGGCCGAGTTCCAGCCAAGGAAAGGGCAAAAA...ACAGAGATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAG
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp CCCCCACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCATGAGTTTGTGCTTTaGGAAGAATGCAGAGGGCTA +
Preference number: 4 (lower is better)
Translates to: PPHQSSPLANPMTSPKGFHEFVL*EECRGL
Trigger: TAGCCCTCTGCATTCTTCCCAAAGCACAAACTCATG...GAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGTGGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp ACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATTGGCTCAAGAGCCAGTaGTTAGGGAAGAAGAAGGTC +
Preference number: 4 (lower is better)
Translates to: TSELSSSKPNDEPKGLPHWLKSQ*LGKKKV
Trigger: GACCTTCTTCTTCCCTAACCACTGGCTCTTGAGCCA...ATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp AGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTCTAGGGAAATCCCAAGCTaGCTCAAGAGCCAGTGGTTA +
Preference number: 4 (lower is better)
Translates to: SSPLANPMTSPKGFRIISREIPS*LKSQWL
Trigger: TAACCACTGGCTCTTGAGCCAGCTTGGGATTTCCCT...AGAGATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp GTCCCATATCCACAACCCACTCACAGGCTTCAAGCAGCAGGACCTTGCCATATTCAGATGGCCAGGTATTaGCAATGGCCAGGGAAATCC +
Preference number: 4 (lower is better)
Translates to: VPYPQPTHRLQAAGPCHIQMARY*QWPGKS
Trigger: GGATTTCCCTGGCCATTGCCAATACCTGGCCATCTG...AATATGGCAAGGTCCTGCTGCTTGAAGCCTGTGAGTGGGTTGTGGATATGGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp AGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTCTCTATTGGAAGCCAGATaGCCAGGTATTGGCAATGGC +
Preference number: 4 (lower is better)
Translates to: SSPLANPMTSPKGFRIISLLEAR*PGIGNG
Trigger: GCCATTGCCAATACCTGGCCATCTGGCTTCCAATAG...AGAGATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp GGCCACTTGGGTACCTTTCAGTGCAGACTGCTTCAGGCCAGAAAACCTCACTCCTATCATTTCTTGCTCTaGGCGAGCGTTCGCCTCTTT +
Preference number: 4 (lower is better)
Translates to: GHLGTFQCRLLQARKPHSYHFLL*ASVRLF
Trigger: AAAGAGGCGAACGCTCGCCCAGAGCAAGAAATGATA...GGAGTGAGGTTTTCTGGCCTGAAGCAGTCTGCACTGAAAGGTACCCAAGTGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR CCA 90 bp GACAGTACTGGGAATTCCCCTGTGAATTACCCAAGAAACAAAGTGGGGGCCAGTACCCAAGAAACAAAGTaGGGGCCAGTGAGCAGCCGT +
Preference number: 4 (lower is better)
Translates to: DSTGNSPVNYPRNKVGASTQETK*GPVSSR
Trigger: ACGGCTGCTCACTGGCCCCCACTTTGTTTCTTGGGT...ACTGGCCCCCACTTTGTTTCTTGGGTAATTCACAGGGGAATTCCCAGTACTGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR CCA 90 bp CTGAGAGTATATGACTGGCTATCATTTCTTGCTCTGGGCGAGCGTTCGCCTCTTCGTGCTGAGCATGACTaGGGCTCCTCAGACAGATCT +
Preference number: 4 (lower is better)
Translates to: LRVYDWLSFLALGERSPLRAEHD*GSSDRS
Trigger: AGATCTGTCTGAGGAGCCCCAGTCATGCTCAGCACG...AAGAGGCGAACGCTCGCCCAGAGCAAGAAATGATAGCCAGTCATATACTCTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR CCA 90 bp TTCAGTTCGGGTTCTAGTCTTAGCAGTGTCTTATGGTTACAATCTACTCTTCTGTTGAGGCACCCCCACTaGCGGGTGCCGTGCACCTGC +
Preference number: 4 (lower is better)
Translates to: FSSGSSLSSVLWLQSTLLLRHPH*RVPCTC
Trigger: GCAGGTGCACGGCACCCGCCAGTGGGGGTGCCTCAA...CAGAAGAGTAGATTGTAACCATAAGACACTGCTAAGACTAGAACCCGAACTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000610919.4
CDS-3UTR TCA 90 bp CAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTGTCCTAAACACCTCTaGAGGCTTTCGATCTTCATG +
Preference number: 4 (lower is better)
Translates to: QSSPLANPMTSPKGFRIICPKHL*RLSIFM
Trigger: CATGAAGATCGAAAGCCTTCAGAGGTGTTTAGGACA...GATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR TCA 90 bp TCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCAACATCCAGCAGGTTaGCGAAGGTGTAGAACTCAT +
Preference number: 4 (lower is better)
Translates to: SELSSSKPNDEPKGLPHHQHPAG*RRCRTH
Trigger: ATGAGTTCTACACCTTCGTCAACCTGCTGGATGTTG...ATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR TCA 90 bp CTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTCTGTGGAAGAAGGCACACCTaGAACTCTTTCTTGCTCCAA +
Preference number: 4 (lower is better)
Translates to: LSSSKPNDEPKGLPHHLCGRRHT*NSFLLQ
Trigger: TTGGAGCAAGAAAGAGTTTCAGGTGTGCCTTCTTCC...ACAGAGATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR TCA 90 bp ACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATTCTGTTGTGCTGATATaGGACGTGCTTCTGCAAAGG +
Preference number: 4 (lower is better)
Translates to: TSELSSSKPNDEPKGLPHSVVLI*DVLLQR
Trigger: CCTTTGCAGAAGCACGTCTCATATCAGCACAACAGA...ATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR TCA 90 bp TCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATTCTGTTGTGCTGATATaGGACGTGCTTCTGCAAAGG +
Preference number: 4 (lower is better)
Translates to: SELSSSKPNDEPKGLPHHSVVLI*DVLLQR
Trigger: CCTTTGCAGAAGCACGTCTCATATCAGCACAACAGA...ATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR TCA 90 bp CCCCCACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCATTTTTCTGTTGTGCTaGTATGAGACGTGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: PPHQSSPLANPMTSPKGFIFLLC*YETCFC
Trigger: GCAGAAGCACGTCTCATATCAGCACAACAGAAAAAT...GAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGTGGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR TCA 90 bp CCCACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGATTTTTCTGTTGTGCTaGTATGAGACGTGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: PTSELSSSKPNDEPKGLPIFLLC*YETCFC
Trigger: GCAGAAGCACGTCTCATATCAGCACAACAGAAAAAT...CGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR TCA 90 bp CCCCCACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCGACCTGAGAGGCTTGTaGCTCTGTTTAAAAGATTTG +
Preference number: 4 (lower is better)
Translates to: PPHQSSPLANPMTSPKGFDLRGL*LCLKDL
Trigger: CAAATCTTTTAAACAGAGTCACAAGCCTCTCAGGTC...GAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGTGGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR TCA 90 bp CCCACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGGACCTGAGAGGCTTGTaGCTCTGTTTAAAAGATTTG +
Preference number: 4 (lower is better)
Translates to: PTSELSSSKPNDEPKGLPDLRGL*LCLKDL
Trigger: CAAATCTTTTAAACAGAGTCACAAGCCTCTCAGGTC...CGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR TCA 90 bp GGCCACTTGGGTACCTTTCAGTGCAGACTGCTTCAGGCCAGAAAACCTCACTCCGGGTCTGAGAGTATATaGCTGGCTATCATTTCTTGC +
Preference number: 4 (lower is better)
Translates to: GHLGTFQCRLLQARKPHSGSESI*LAIISC
Trigger: GCAAGAAATGATAGCCAGTCATATACTCTCAGACCC...GGAGTGAGGTTTTCTGGCCTGAAGCAGTCTGCACTGAAAGGTACCCAAGTGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR TCA 90 bp AGCAGGTGTCGGGCTGGCATAAAGGCTTCTTACCAGGATTCCAGTTTATCCTTCAGCAGCCAGGGGAGTTaGTGTGGAAGATGCTCTAAG +
Preference number: 4 (lower is better)
Translates to: SRCRAGIKASYQDSSLSFSSQGS*CGRCSK
Trigger: CTTAGAGCATCTTCCACATCAACTCCCCTGGCTGCT...GAAGGATAAACTGGAATCCTGGTAAGAAGCCTTTATGCCAGCCCGACACCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR GCA 90 bp ACTGTTTCAGGCCACTTGGGTACCTTTCAGTGCAGACTGCTTCAGGCCAGAAAACAGGAGCTTCTCCTATaGTGGGATCGGGAATTCTGG +
Preference number: 4 (lower is better)
Translates to: TVSGHLGTFQCRLLQARKQELLL*WDREFW
Trigger: CCAGAATTCCCGATCCCAGCATAGGAGAAGCTCCTG...TTTTCTGGCCTGAAGCAGTCTGCACTGAAAGGTACCCAAGTGGCCTGAAACAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR GCA 90 bp TCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTCTGTTGGTCAGTTCCAGCCATaGAGCATCCATGTCATTGAG +
Preference number: 4 (lower is better)
Translates to: SPLANPMTSPKGFRIISVGQFQP*SIHVIE
Trigger: CTCAATGACATGGATGCTGCATGGCTGGAACTGACC...AACAGAGATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp GCAGCCAACAGCCACGACATTCAGCAATCTCAGTGTGACAAACAACACATCTGTTCTCTGGGCTGCCAATaGTCACCTCAGGGATCCACA +
Preference number: 4 (lower is better)
Translates to: AANSHDIQQSQCDKQHICSLGCQ*SPQGST
Trigger: TGTGGATCCCTGAGGTGAGCATTGGCAGCCCAGAGA...ACAGATGTGTTGTTTGTCACACTGAGATTGCTGAATGTCGTGGCTGTTGGCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR GCA 90 bp AGTCACCAGAGTCTGGAAGTTCTTCGCTTGAACTTGAGTAGCCACTGTACTATTTCTCATTGCAGAGGCTaGACACTAGCGCCCACCGGC +
Preference number: 4 (lower is better)
Translates to: SHQSLEVLRLNLSSHCTISHCRG*TLAPTG
Trigger: GCCGGTGGGCGCTAGTGTGCAGCCTCTGCAATGAGA...AATAGTACAGTGGCTACTCAAGTTCAAGCGAAGAACTTCCAGACTCTGGTGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp TCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTCTGTTTCATCCTCCAACTGCTaGAGCTTCTGCTTACGGACA +
Preference number: 4 (lower is better)
Translates to: SPLANPMTSPKGFRIISVSSSNC*SFCLRT
Trigger: TGTCCGTAAGCAGAAGCTGCAGCAGTTGGAGGATGA...AACAGAGATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp GGCCACTTGGGTACCTTTCAGTGCAGACTGCTTCAGGCCAGAAAACCTCACTCCCTAAATAAGACATCCTaGTCCCGCTTGGCTAGATTG +
Preference number: 4 (lower is better)
Translates to: GHLGTFQCRLLQARKPHSLNKTS*SRLARL
Trigger: CAATCTAGCCAAGCGGGAGCAGGATGTCTTATTTAG...GGAGTGAGGTTTTCTGGCCTGAAGCAGTCTGCACTGAAAGGTACCCAAGTGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR GCA 90 bp GAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTCCTAAATAAGACATCCTaGTCCCGCTTGGCTAGATTG +
Preference number: 4 (lower is better)
Translates to: ELSSSKPNDEPKGLPHHLLNKTS*SRLARL
Trigger: CAATCTAGCCAAGCGGGAGCAGGATGTCTTATTTAG...GAGATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp CTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTCTGTAGGTGCGTGAACAGCTaGAGCCTCCTAAATAAGACA +
Preference number: 4 (lower is better)
Translates to: LSSSKPNDEPKGLPHHLCRCVNS*SLLNKT
Trigger: TGTCTTATTTAGGAGGCTGCAGCTGTTCACGCACCT...ACAGAGATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp ACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATAGGTGCGTGAACAGCTaGAGCCTCCTAAATAAGACA +
Preference number: 4 (lower is better)
Translates to: TSELSSSKPNDEPKGLPHRCVNS*SLLNKT
Trigger: TGTCTTATTTAGGAGGCTGCAGCTGTTCACGCACCT...ATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp AGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTCTAGGTGCGTGAACAGCTaGAGCCTCCTAAATAAGACA +
Preference number: 4 (lower is better)
Translates to: SSPLANPMTSPKGFRIISRCVNS*SLLNKT
Trigger: TGTCTTATTTAGGAGGCTGCAGCTGTTCACGCACCT...AGAGATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp CCACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCCTGAAGAATGCAGAATaGCACTTCAAGTCCTCTATC +
Preference number: 4 (lower is better)
Translates to: PHQSSPLANPMTSPKGFRLKNAE*HFKSSI
Trigger: GATAGAGGACTTGAAGTGGCATTCTGCATTCTTCAG...GCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp TCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTTCCAGGGCTATTCTaGAAAGGATCTCGCTTATGG +
Preference number: 4 (lower is better)
Translates to: SELSSSKPNDEPKGLPHHLPGLF*KGSRLW
Trigger: CCATAAGCGAGATCCTTTGCAGAATAGCCCTGGAAG...ATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp TCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTCTGTTGCTTCAGCAGGGTTTTaGCTTCACTTCCAGGGCTAT +
Preference number: 4 (lower is better)
Translates to: SPLANPMTSPKGFRIISVASAGF*LHFQGY
Trigger: ATAGCCCTGGAAGTGAAGGCAAAACCCTGCTGAAGC...AACAGAGATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp CCACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCCTGAAGCTTCAGAGCTaGTGCCTATATGCTATAATG +
Preference number: 4 (lower is better)
Translates to: PHQSSPLANPMTSPKGFRLKLQS*CLYAIM
Trigger: CATTATAGCATATAGGCAGCAGCTCTGAAGCTTCAG...GCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp CAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCGTCAATCTAAAAACCTaGATCATTCTTCCCCCTCCC +
Preference number: 4 (lower is better)
Translates to: QSSPLANPMTSPKGFRIIVNLKT*IILPPP
Trigger: GGGAGGGGGAAGAATGATGCAGGTTTTTAGATTGAC...GATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp GCAGCCAACAGCCACGACATTCAGCAATCTCAGTGTGACAAACAACACATCTGTACCCACTGCCTGCTCTaGTCCATGACAGTACTGGGA +
Preference number: 4 (lower is better)
Translates to: AANSHDIQQSQCDKQHICTHCLL*SMTVLG
Trigger: TCCCAGTACTGTCATGGAGCAGAGCAGGCAGTGGGT...ACAGATGTGTTGTTTGTCACACTGAGATTGCTGAATGTCGTGGCTGTTGGCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR GCA 90 bp TCCCCTGTGAATTACCCAAGAAACAAAGTGGGGGCCAGTGAGCAGCCGTGCTTATGTACATACAGCTCATaGACACACATCAGCACCCAC +
Preference number: 4 (lower is better)
Translates to: SPVNYPRNKVGASEQPCLCTYSS*THISTH
Trigger: GTGGGTGCTGATGTGTGTGCATGAGCTGTATGTACA...TAAGCACGGCTGCTCACTGGCCCCCACTTTGTTTCTTGGGTAATTCACAGGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR CCA 90 bp TCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTCTGTTTGGGATCGGGAATTCTaGGACCAAGTAGTTGACAGG +
Preference number: 4 (lower is better)
Translates to: SPLANPMTSPKGFRIISVWDREF*DQVVDR
Trigger: CCTGTCAACTACTTGGTCCCAGAATTCCCGATCCCA...AACAGAGATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp ATTGGTCAGTTCCAGCCATGCAGCATCCATGTCATTGAGGTCATAGCGACACACGAGCTTCTCCTATGCTaGGATCGGGAATTCTGGGAC +
Preference number: 4 (lower is better)
Translates to: IGQFQPCSIHVIEVIATHELLLC*DREFWD
Trigger: GTCCCAGAATTCCCGATCCCAGCATAGGAGAAGCTC...GTGTGTCGCTATGACCTCAATGACATGGATGCTGCATGGCTGGAACTGACCAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511925.5
CDS-3UTR CCA 90 bp ATTTTTAACCAACACAACCTCATGCTGTGGTGTGTACAAGGGTCTGAGAGTATACCACAGGCTGAGGGATaGTCCCCGGGCTCACAGGCA +
Preference number: 4 (lower is better)
Translates to: IFNQHNLMLWCVQGSESIPQAEG*SPGSQA
Trigger: TGCCTGTGAGCCCGGGGACCATCCCTCAGCCTGTGG...TATACTCTCAGACCCTTGTACACACCACAGCATGAGGTTGTGTTGGTTAAAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR CCA 90 bp TCTCCCCCACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTGAATATCTGTTCCTaGACTTTGCACACAGACCGT +
Preference number: 4 (lower is better)
Translates to: SPPHQSSPLANPMTSPKGLNICS*TLHTDR
Trigger: ACGGTCTGTGTGCAAAGTCCAGGAACAGATATTCAA...GCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGTGGGGGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp TCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTCTGTTTCAAGTCCTCTATCTTaGGAGCATCAGGGCCAACAG +
Preference number: 4 (lower is better)
Translates to: SPLANPMTSPKGFRIISVSSPLS*EHQGQQ
Trigger: CTGTTGGCCCTGATGCTCCCAAGATAGAGGACTTGA...AACAGAGATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp CAGGGAAATCCCAAGCTGGCTCAAGAGCCAGTGGTTAGGGAAGAAGAAGGTCAATCTACCACACAGGTCTaGCTGCTTCAGCAGGGTTTT +
Preference number: 4 (lower is better)
Translates to: QGNPKLAQEPVVREEEGQSTTQV*LLQQGF
Trigger: AAAACCCTGCTGAAGCAGCCAGACCTGTGTGGTAGA...TTGACCTTCTTCTTCCCTAACCACTGGCTCTTGAGCCAGCTTGGGATTTCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp TCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATTCTCTTCTTTTCCCATaGTCTGGCATCACCACACCA +
Preference number: 4 (lower is better)
Translates to: SELSSSKPNDEPKGLPHHSLLFP*SGITTP
Trigger: TGGTGTGGTGATGCCAGACCATGGGAAAAGAAGAGA...ATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp TGTACTATTGGAAGCCAGATGGCCAGGTATTGGCAATGGCCAGGGAAATCCCAATTGTCCAGATGCCTCTaGGACACATCTGTGGACCTG +
Preference number: 4 (lower is better)
Translates to: CTIGSQMARYWQWPGKSQLSRCL*DTSVDL
Trigger: CAGGTCCACAGATGTGTCCCAGAGGCATCTGGACAA...TTGGGATTTCCCTGGCCATTGCCAATACCTGGCCATCTGGCTTCCAATAGTACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp CCCACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGTTTATGGGCTGTGAATaGTACCATGAGGGTTTCTCA +
Preference number: 4 (lower is better)
Translates to: PTSELSSSKPNDEPKGLPFMGCE*YHEGFS
Trigger: TGAGAAACCCTCATGGTACCATTCACAGCCCATAAA...CGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp TCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTCTGTTAGGGAAATCCCAAGCTaGCTCAAGAGCCAGTGGTTA +
Preference number: 4 (lower is better)
Translates to: SPLANPMTSPKGFRIISVREIPS*LKSQWL
Trigger: TAACCACTGGCTCTTGAGCCAGCTTGGGATTTCCCT...AACAGAGATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp TGTACTATTGGAAGCCAGATGGCCAGGTATTGGCAATGGCCAGGGAAATCCCAACAGATGGCCAGGTATTaGCAATGGCCAGGGAAATCC +
Preference number: 4 (lower is better)
Translates to: CTIGSQMARYWQWPGKSQQMARY*QWPGKS
Trigger: GGATTTCCCTGGCCATTGCCAATACCTGGCCATCTG...TTGGGATTTCCCTGGCCATTGCCAATACCTGGCCATCTGGCTTCCAATAGTACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp GTCCCATATCCACAACCCACTCACAGGCTTCAAGCAGCAGGACCTTGCCATATTCTATTGGAAGCCAGATaGCCAGGTATTGGCAATGGC +
Preference number: 4 (lower is better)
Translates to: VPYPQPTHRLQAAGPCHILLEAR*PGIGNG
Trigger: GCCATTGCCAATACCTGGCCATCTGGCTTCCAATAG...AATATGGCAAGGTCCTGCTGCTTGAAGCCTGTGAGTGGGTTGTGGATATGGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp AATCCCAAGCTGGCTCAAGAGCCAGTGGTTAGGGAAGAAGAAGGTCAAGTGGACCTATTGGAAGCCAGATaGCCAGGTATTGGCAATGGC +
Preference number: 4 (lower is better)
Translates to: NPKLAQEPVVREEEGQVDLLEAR*PGIGNG
Trigger: GCCATTGCCAATACCTGGCCATCTGGCTTCCAATAG...GTCCACTTGACCTTCTTCTTCCCTAACCACTGGCTCTTGAGCCAGCTTGGGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp CAAAGTCTTCTTTACACTCACCACCAGGGGGCGTATGGGAGCACAAAAGCCTCATCTAGAATGAAGGAATaGGGGTGGGGAAGACACACC +
Preference number: 4 (lower is better)
Translates to: QSLLYTHHQGAYGSTKASSRMKE*GWGRHT
Trigger: GGTGTGTCTTCCCCACCCCCATTCCTTCATTCTAGA...TGAGGCTTTTGTGCTCCCATACGCCCCCTGGTGGTGAGTGTAAAGAAGACTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR CCA 90 bp CCAACAGCCACGACATTCAGCAATCTCAGTGTGACAAACAACACATCTGTAGCGCCAGGAATCCTAACCTaGTCTGGGAAGGGGCATCAC +
Preference number: 4 (lower is better)
Translates to: PTATTFSNLSVTNNTSVAPGILT*SGKGHH
Trigger: GTGATGCCCCTTCCCAGACCAGGTTAGGATTCCTGG...CGCTACAGATGTGTTGTTTGTCACACTGAGATTGCTGAATGTCGTGGCTGTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR CCA 90 bp AGCAGGTGTCGGGCTGGCATAAAGGCTTCTTACCAGGATTCCAGTTTATCCTTCCAGCAGGTGTCGGGCTaGCATAAAGGCTTCTTACCA +
Preference number: 4 (lower is better)
Translates to: SRCRAGIKASYQDSSLSFQQVSG*HKGFLP
Trigger: TGGTAAGAAGCCTTTATGCCAGCCCGACACCTGCTG...GAAGGATAAACTGGAATCCTGGTAAGAAGCCTTTATGCCAGCCCGACACCTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR CCA 90 bp CTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTCTGTCAAAACCATCAAATATaGCTGAGCCTCTCGGCTCGT +
Preference number: 4 (lower is better)
Translates to: LSSSKPNDEPKGLPHHLCQNHQI*LSLSAR
Trigger: ACGAGCCGAGAGGCTCAGCCATATTTGATGGTTTTG...ACAGAGATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512960.5
CDS-3UTR TCA 90 bp TTCAGGCATTCCCATCTCCTTAAATTCTTCATTGGTCAGTTCCAGCCATGCAGCCTGGGACCAAGTAGTTaGCAGGCTGCCATTGTCGTC +
Preference number: 4 (lower is better)
Translates to: FRHSHLLKFFIGQFQPCSLGPSS*QAAIVV
Trigger: GACGACAATGGCAGCCTGTCAACTACTTGGTCCCAG...GCTGCATGGCTGGAACTGACCAATGAAGAATTTAAGGAGATGGGAATGCCTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511925.5
CDS-3UTR TCA 90 bp AGTCACCAGAGTCTGGAAGTTCTTCGCTTGAACTTGAGTAGCCACTGTACTATTGCTGCTGGGAATGTGTaGCACCTTGGTGATGGGCTC +
Preference number: 4 (lower is better)
Translates to: SHQSLEVLRLNLSSHCTIAAGNV*HLGDGL
Trigger: GAGCCCATCACCAAGGTGTCACACATTCCCAGCAGC...AATAGTACAGTGGCTACTCAAGTTCAAGCGAAGAACTTCCAGACTCTGGTGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR TCA 90 bp GTCCCATATCCACAACCCACTCACAGGCTTCAAGCAGCAGGACCTTGCCATATTGGAAGAAGGCACACCTaGAACTCTTTCTTGCTCCAA +
Preference number: 4 (lower is better)
Translates to: VPYPQPTHRLQAAGPCHIGRRHT*NSFLLQ
Trigger: TTGGAGCAAGAAAGAGTTTCAGGTGTGCCTTCTTCC...AATATGGCAAGGTCCTGCTGCTTGAAGCCTGTGAGTGGGTTGTGGATATGGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR TCA 90 bp TGTACTATTGGAAGCCAGATGGCCAGGTATTGGCAATGGCCAGGGAAATCCCAAAAGCATGTTTTCCAGTaGGGAGGAGGAGCAGGAAGA +
Preference number: 4 (lower is better)
Translates to: CTIGSQMARYWQWPGKSQKHVFQ*GGGAGR
Trigger: TCTTCCTGCTCCTCCTCCTCACTGGAAAACATGCTT...TTGGGATTTCCCTGGCCATTGCCAATACCTGGCCATCTGGCTTCCAATAGTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR TCA 90 bp CAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCGACCTGAGAGGCTTGTaGCTCTGTTTAAAAGATTTG +
Preference number: 4 (lower is better)
Translates to: QSSPLANPMTSPKGFRIIDLRGL*LCLKDL
Trigger: CAAATCTTTTAAACAGAGTCACAAGCCTCTCAGGTC...GATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR TCA 90 bp ACACTTCAGTCTCTTTCCTGTATAACCTTGGTCAATAGTAAGAGCTTATCGCAACCTTGTGCCAGGTGCTaGCTGCCCCACTCCAGGGGA +
Preference number: 4 (lower is better)
Translates to: TLQSLSCITLVNSKSLSQPCARC*LPHSRG
Trigger: TCCCCTGGAGTGGGGCAGTCAGCACCTGGCACAAGG...TTGCGATAAGCTCTTACTATTGACCAAGGTTATACAGGAAAGAGACTGAAGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR TCA 90 bp CCCACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGATCATCTGGAAGACTTaGAAGTTAACTGCAGAACTC +
Preference number: 4 (lower is better)
Translates to: PTSELSSSKPNDEPKGLPIIWKT*KLTAEL
Trigger: GAGTTCTGCAGTTAACTTTCAAGTCTTCCAGATGAT...CGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR TCA 90 bp CCACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTGGAAGACTTaGAAGTTAACTGCAGAACTC +
Preference number: 4 (lower is better)
Translates to: PHQSSPLANPMTSPKGFRIIWKT*KLTAEL
Trigger: GAGTTCTGCAGTTAACTTTCAAGTCTTCCAGATGAT...GCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR TCA 90 bp CCCACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGTTTTTCAATTTTAGCTaGATGGACACCAAGCTAGGC +
Preference number: 4 (lower is better)
Translates to: PTSELSSSKPNDEPKGLPFFNFS*MDTKLG
Trigger: GCCTAGCTTGGTGTCCATTCAGCTAAAATTGAAAAA...CGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR TCA 90 bp TTCCTAATAGTGCAAATGAATCTGATACCTCTTAAAATGGTGAGAGGTCATACAAACGCCCGCGGAAGTTaGGGCACCCCCACTGGCGGG +
Preference number: 4 (lower is better)
Translates to: FLIVQMNLIPLKMVRGHTNARGS*GTPTGG
Trigger: CCCGCCAGTGGGGGTGCCTCAACTTCCGCGGGCGTT...TGTATGACCTCTCACCATTTTAAGAGGTATCAGATTCATTTGCACTATTAGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610919.4
CDS-3UTR TCA 90 bp TCAACTCCTTGGGTCATTTTCTTGGGGCTCATTCACTCTAGCTCTAGAATGAAGGCCTGCTCTGCTCCATaGCAGTACTGGGAATTCCCC +
Preference number: 4 (lower is better)
Translates to: STPWVIFLGLIHSSSRMKACSAP*QYWEFP
Trigger: GGGGAATTCCCAGTACTGTCATGGAGCAGAGCAGGC...CTTCATTCTAGAGCTAGAGTGAATGAGCCCCAAGAAAATGACCCAAGGAGTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR TCA 90 bp CCAACAGCCACGACATTCAGCAATCTCAGTGTGACAAACAACACATCTGTAGCGAGCAGCCAGGGGAGTTaGTGTGGAAGATGCTCTAAG +
Preference number: 4 (lower is better)
Translates to: PTATTFSNLSVTNNTSVASSQGS*CGRCSK
Trigger: CTTAGAGCATCTTCCACATCAACTCCCCTGGCTGCT...CGCTACAGATGTGTTGTTTGTCACACTGAGATTGCTGAATGTCGTGGCTGTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR GCA 90 bp AATCCCAAGCTGGCTCAAGAGCCAGTGGTTAGGGAAGAAGAAGGTCAAGTGGACCTGTCTCCAGGGATCTaGCAACACATAGTACTCATC +
Preference number: 4 (lower is better)
Translates to: NPKLAQEPVVREEEGQVDLSPGI*QHIVLI
Trigger: GATGAGTACTATGTGTTGGCAGATCCCTGGAGACAG...GTCCACTTGACCTTCTTCTTCCCTAACCACTGGCTCTTGAGCCAGCTTGGGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp TGTACTATTGGAAGCCAGATGGCCAGGTATTGGCAATGGCCAGGGAAATCCCAAAGAACACCATCTCATTaGCGTCCTCACCATCAGGAG +
Preference number: 4 (lower is better)
Translates to: CTIGSQMARYWQWPGKSQRTPSH*RPHHQE
Trigger: CTCCTGATGGTGAGGACGGCAATGAGATGGTGTTCT...TTGGGATTTCCCTGGCCATTGCCAATACCTGGCCATCTGGCTTCCAATAGTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp ATAGCTCATGCACCCCAATTACAGCAGGTGTCGGGCTGGCATAAAGGCTTCTTAAGAACACCATCTCATTaGCGTCCTCACCATCAGGAG +
Preference number: 4 (lower is better)
Translates to: IAHAPQLQQVSGWHKGFLRTPSH*RPHHQE
Trigger: CTCCTGATGGTGAGGACGGCAATGAGATGGTGTTCT...TAAGAAGCCTTTATGCCAGCCCGACACCTGCTGTAATTGGGGTGCATGAGCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR GCA 90 bp GTGTCGGGCTGGCATAAAGGCTTCTTACCAGGATTCCAGTTTATCCTTCTCAATCCATCTTCTCTGGGCTaGCAATGCTCACCTCAGGGA +
Preference number: 4 (lower is better)
Translates to: VSGWHKGFLPGFQFILLNPSSLG*QCSPQG
Trigger: TCCCTGAGGTGAGCATTGGCAGCCCAGAGAAGATGG...ATTGAGAAGGATAAACTGGAATCCTGGTAAGAAGCCTTTATGCCAGCCCGACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR GCA 90 bp ATAGCTCATGCACCCCAATTACAGCAGGTGTCGGGCTGGCATAAAGGCTTCTTATCATCCTCCAACTGCTaGAGCTTCTGCTTACGGACA +
Preference number: 4 (lower is better)
Translates to: IAHAPQLQQVSGWHKGFLSSSNC*SFCLRT
Trigger: TGTCCGTAAGCAGAAGCTGCAGCAGTTGGAGGATGA...TAAGAAGCCTTTATGCCAGCCCGACACCTGCTGTAATTGGGGTGCATGAGCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR GCA 90 bp CTGAGAGTATATGACTGGCTATCATTTCTTGCTCTGGGCGAGCGTTCGCCTCTTAACTCATCCTCCAACTaGTGCAGCTTCTGCTTACGG +
Preference number: 4 (lower is better)
Translates to: LRVYDWLSFLALGERSPLNSSSN*CSFCLR
Trigger: CCGTAAGCAGAAGCTGCAGCAGTTGGAGGATGAGTT...AAGAGGCGAACGCTCGCCCAGAGCAAGAAATGATAGCCAGTCATATACTCTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR GCA 90 bp CTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTCTGTCTAAATAAGACATCCTaGTCCCGCTTGGCTAGATTG +
Preference number: 4 (lower is better)
Translates to: LSSSKPNDEPKGLPHHLCLNKTS*SRLARL
Trigger: CAATCTAGCCAAGCGGGAGCAGGATGTCTTATTTAG...ACAGAGATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp ACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCTAAATAAGACATCCTaGTCCCGCTTGGCTAGATTG +
Preference number: 4 (lower is better)
Translates to: TSELSSSKPNDEPKGLPHLNKTS*SRLARL
Trigger: CAATCTAGCCAAGCGGGAGCAGGATGTCTTATTTAG...ATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp TCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTCTGTTAGGTGCGTGAACAGCTaGAGCCTCCTAAATAAGACA +
Preference number: 4 (lower is better)
Translates to: SPLANPMTSPKGFRIISVRCVNS*SLLNKT
Trigger: TGTCTTATTTAGGAGGCTGCAGCTGTTCACGCACCT...AACAGAGATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp CATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCCTGAAGCTTCAGAGCTaGTGCCTATATGCTATAATG +
Preference number: 4 (lower is better)
Translates to: HQSSPLANPMTSPKGFRILKLQS*CLYAIM
Trigger: CATTATAGCATATAGGCAGCAGCTCTGAAGCTTCAG...GATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp TCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCAAGCAGCAGGACCTTaGCATATTACCCTAAATCTC +
Preference number: 4 (lower is better)
Translates to: SELSSSKPNDEPKGLPHHQAAGP*HITLNL
Trigger: GAGATTTAGGGTAATATGGCAAGGTCCTGCTGCTTG...ATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp CCCACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCTCACCCAGAGCTGTTaGTGTAATCAAAAGATAACT +
Preference number: 4 (lower is better)
Translates to: PTSELSSSKPNDEPKGLPLTQSC*CNQKIT
Trigger: AGTTATCTTTTGATTACAGCAACAGCTCTGGGTGAG...CGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp GAGACAAACACAGTCCAAACAATAGACTTCTTGTCCTCCCCCTCCCAACAACTACTGGCTATCATTTCTTaGTCTGGGCGAGCGTTCGCC +
Preference number: 4 (lower is better)
Translates to: ETNTVQTIDFLSSPSQQLLAIIS*SGRAFA
Trigger: GGCGAACGCTCGCCCAGAGCAAGAAATGATAGCCAG...TAGTTGTTGGGAGGGGGAGGACAAGAAGTCTATTGTTTGGACTGTGTTTGTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR GCA 90 bp ACTGTTTCAGGCCACTTGGGTACCTTTCAGTGCAGACTGCTTCAGGCCAGAAAACCTTTCAGTGCAGACTaGTTCAGGCCAGAAAACCTC +
Preference number: 4 (lower is better)
Translates to: TVSGHLGTFQCRLLQARKPFSAD*FRPENL
Trigger: GAGGTTTTCTGGCCTGAAGCAGTCTGCACTGAAAGG...TTTTCTGGCCTGAAGCAGTCTGCACTGAAAGGTACCCAAGTGGCCTGAAACAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR GCA 90 bp CTGAGAGTATATGACTGGCTATCATTTCTTGCTCTGGGCGAGCGTTCGCCTCTTCCTTTCAGTGCAGACTaGTTCAGGCCAGAAAACCTC +
Preference number: 4 (lower is better)
Translates to: LRVYDWLSFLALGERSPLPFSAD*FRPENL
Trigger: GAGGTTTTCTGGCCTGAAGCAGTCTGCACTGAAAGG...AAGAGGCGAACGCTCGCCCAGAGCAAGAAATGATAGCCAGTCATATACTCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR GCA 90 bp GAGAGGCAAAGTCTTCTTTACACTCACCACCAGGGGGCGTATGGGAGCACAAAAAAAGCCTCACAAAACTaGTCCAGGATCCTGCCTCTT +
Preference number: 4 (lower is better)
Translates to: ERQSLLYTHHQGAYGSTKKASQN*SRILPL
Trigger: AAGAGGCAGGATCCTGGAGCAGTTTTGTGAGGCTTT...TTTTGTGCTCCCATACGCCCCCTGGTGGTGAGTGTAAAGAAGACTTTGCCTCTC
50% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR CCA 90 bp ACTGTTTCAGGCCACTTGGGTACCTTTCAGTGCAGACTGCTTCAGGCCAGAAAATGGGATCGGGAATTCTaGGACCAAGTAGTTGACAGG +
Preference number: 4 (lower is better)
Translates to: TVSGHLGTFQCRLLQARKWDREF*DQVVDR
Trigger: CCTGTCAACTACTTGGTCCCAGAATTCCCGATCCCA...TTTTCTGGCCTGAAGCAGTCTGCACTGAAAGGTACCCAAGTGGCCTGAAACAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR CCA 90 bp TCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATTTCGATCTTCATGTCTaGAGCAGGAGCTTCTCCTAT +
Preference number: 4 (lower is better)
Translates to: SELSSSKPNDEPKGLPHHFDLHV*SRSFSY
Trigger: ATAGGAGAAGCTCCTGCTCCAGACATGAAGATCGAA...ATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp ACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATTTCGATCTTCATGTCTaGAGCAGGAGCTTCTCCTAT +
Preference number: 4 (lower is better)
Translates to: TSELSSSKPNDEPKGLPHFDLHV*SRSFSY
Trigger: ATAGGAGAAGCTCCTGCTCCAGACATGAAGATCGAA...ATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp CTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTCTGTCTAGGACCCTCTCCATaGTGTATTCATCTAGTTCAG +
Preference number: 4 (lower is better)
Translates to: LSSSKPNDEPKGLPHHLCLGPSP*CIHLVQ
Trigger: CTGAACTAGATGAATACACCATGGAGAGGGTCCTAG...ACAGAGATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp TCCCCTGTGAATTACCCAAGAAACAAAGTGGGGGCCAGTGAGCAGCCGTGCTTACTAGGACCCTCTCCATaGTGTATTCATCTAGTTCAG +
Preference number: 4 (lower is better)
Translates to: SPVNYPRNKVGASEQPCLLGPSP*CIHLVQ
Trigger: CTGAACTAGATGAATACACCATGGAGAGGGTCCTAG...TAAGCACGGCTGCTCACTGGCCCCCACTTTGTTTCTTGGGTAATTCACAGGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR CCA 90 bp CAGTGGTTAGGGAAGAAGAAGGTCAAGTGGACTGGTAAAAATTCTACTTCAACTGCGCCCACCGGCTGCTaGGAATGTGTGACACCTTGG +
Preference number: 4 (lower is better)
Translates to: QWLGKKKVKWTGKNSTSTAPTGC*ECVTPW
Trigger: CCAAGGTGTCACACATTCCCAGCAGCCGGTGGGCGC...AGTTGAAGTAGAATTTTTACCAGTCCACTTGACCTTCTTCTTCCCTAACCACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp AGTCACCAGAGTCTGGAAGTTCTTCGCTTGAACTTGAGTAGCCACTGTACTATTGGTTCTGCTCAAGGCTaGCAAAGGGCTCCAGCGGAT +
Preference number: 4 (lower is better)
Translates to: SHQSLEVLRLNLSSHCTIGSAQG*QRAPAD
Trigger: ATCCGCTGGAGCCCTTTGCCAGCCTTGAGCAGAACC...AATAGTACAGTGGCTACTCAAGTTCAAGCGAAGAACTTCCAGACTCTGGTGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp TCTCCCCCACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCAACTTCCAGTACTaGTACAGGAAATCCACTACT +
Preference number: 4 (lower is better)
Translates to: SPPHQSSPLANPMTSPKGFNFQY*YRKSTT
Trigger: AGTAGTGGATTTCCTGTACCAGTACTGGAAGTTGAA...GCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGTGGGGGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp CATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCTTGAATATCTGTTCCTaGACTTTGCACACAGACCGT +
Preference number: 4 (lower is better)
Translates to: HQSSPLANPMTSPKGFRILNICS*TLHTDR
Trigger: ACGGTCTGTGTGCAAAGTCCAGGAACAGATATTCAA...GATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp GAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTCTTGAATATCTGTTCCTaGACTTTGCACACAGACCGT +
Preference number: 4 (lower is better)
Translates to: ELSSSKPNDEPKGLPHHLLNICS*TLHTDR
Trigger: ACGGTCTGTGTGCAAAGTCCAGGAACAGATATTCAA...GAGATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp GTCCCATATCCACAACCCACTCACAGGCTTCAAGCAGCAGGACCTTGCCATATTTCTCTTCTTTTCCCATaGTCTGGCATCACCACACCA +
Preference number: 4 (lower is better)
Translates to: VPYPQPTHRLQAAGPCHISLLFP*SGITTP
Trigger: TGGTGTGGTGATGCCAGACCATGGGAAAAGAAGAGA...AATATGGCAAGGTCCTGCTGCTTGAAGCCTGTGAGTGGGTTGTGGATATGGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp TGTACTATTGGAAGCCAGATGGCCAGGTATTGGCAATGGCCAGGGAAATCCCAATTTTTGCCCTTTCCTTaGCTGGAACTCGGCCTAAGC +
Preference number: 4 (lower is better)
Translates to: CTIGSQMARYWQWPGKSQFLPFP*LELGLS
Trigger: GCTTAGGCCGAGTTCCAGCCAAGGAAAGGGCAAAAA...TTGGGATTTCCCTGGCCATTGCCAATACCTGGCCATCTGGCTTCCAATAGTACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp AGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTCTATATGCACTAGTGGTTaGCTCTGGGAAGTAACAGTC +
Preference number: 4 (lower is better)
Translates to: SSPLANPMTSPKGFRIISICTSG*LWEVTV
Trigger: GACTGTTACTTCCCAGAGCCAACCACTAGTGCATAT...AGAGATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp CTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTCTGTGGAATCCATTCATGTTaGAAGCCCAGATTCCCTAAC +
Preference number: 4 (lower is better)
Translates to: LSSSKPNDEPKGLPHHLCGIHSC*KPRFPN
Trigger: GTTAGGGAATCTGGGCTTCCAACATGAATGGATTCC...ACAGAGATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp ACTGTTTCAGGCCACTTGGGTACCTTTCAGTGCAGACTGCTTCAGGCCAGAAAATCTAGAATGAAGGAATaGGGGTGGGGAAGACACACC +
Preference number: 4 (lower is better)
Translates to: TVSGHLGTFQCRLLQARKSRMKE*GWGRHT
Trigger: GGTGTGTCTTCCCCACCCCCATTCCTTCATTCTAGA...TTTTCTGGCCTGAAGCAGTCTGCACTGAAAGGTACCCAAGTGGCCTGAAACAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR CCA 90 bp CTGAGAGTATATGACTGGCTATCATTTCTTGCTCTGGGCGAGCGTTCGCCTCTTCCTGAGTCAACTCCTTaGGTCATTTTCTTGGGGCTC +
Preference number: 4 (lower is better)
Translates to: LRVYDWLSFLALGERSPLPESTP*VIFLGL
Trigger: GAGCCCCAAGAAAATGACCCAAGGAGTTGACTCAGG...AAGAGGCGAACGCTCGCCCAGAGCAAGAAATGATAGCCAGTCATATACTCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR CCA 90 bp GACTCCATAGCTCATGCACCCCAATTACAGCAGGTGTCGGGCTGGCATAAAGGCAAATTTTCCCATCTCTaGCCCCCTCCATTAGAAATG +
Preference number: 4 (lower is better)
Translates to: DSIAHAPQLQQVSGWHKGKFSHL*PPPLEM
Trigger: CATTTCTAATGGAGGGGGCCAGAGATGGGAAAATTT...GCCTTTATGCCAGCCCGACACCTGCTGTAATTGGGGTGCATGAGCTATGGAGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR CCA 90 bp GCCAACAGCCACGACATTCAGCAATCTCAGTGTGACAAACAACACATCTGTAGCCAGCAGGTGTCGGGCTaGCATAAAGGCTTCTTACCA +
Preference number: 4 (lower is better)
Translates to: ANSHDIQQSQCDKQHICSQQVSG*HKGFLP
Trigger: TGGTAAGAAGCCTTTATGCCAGCCCGACACCTGCTG...GCTACAGATGTGTTGTTTGTCACACTGAGATTGCTGAATGTCGTGGCTGTTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
3UTR CAA 72 bp TCCACAACCCACTCACAGGCTTCAAGCAGCAGGACCTaGCCATATTACCCTAAATCTCCATATTGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: STTHSQASSSRT*PYYPKSPYCSS
Trigger: GCTGCTGCAATATGGAGATTTAGGGTAATATGGCAAGGTCCTGCTGCTTGAAGCCTGTGAGTGGGTTGTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR TCA 90 bp TCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTCTGTTTGTCCTAAACACCTCTaGAGGCTTTCGATCTTCATG +
Preference number: 4 (lower is better)
Translates to: SPLANPMTSPKGFRIISVCPKHL*RLSIFM
Trigger: CATGAAGATCGAAAGCCTTCAGAGGTGTTTAGGACA...AACAGAGATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR TCA 90 bp AATCCCAAGCTGGCTCAAGAGCCAGTGGTTAGGGAAGAAGAAGGTCAAGTGGACTGTCCTAAACACCTCTaGAGGCTTTCGATCTTCATG +
Preference number: 4 (lower is better)
Translates to: NPKLAQEPVVREEEGQVDCPKHL*RLSIFM
Trigger: CATGAAGATCGAAAGCCTTCAGAGGTGTTTAGGACA...GTCCACTTGACCTTCTTCTTCCCTAACCACTGGCTCTTGAGCCAGCTTGGGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR TCA 90 bp CAGGGAAATCCCAAGCTGGCTCAAGAGCCAGTGGTTAGGGAAGAAGAAGGTCAATGTCCTAAACACCTCTaGAGGCTTTCGATCTTCATG +
Preference number: 4 (lower is better)
Translates to: QGNPKLAQEPVVREEEGQCPKHL*RLSIFM
Trigger: CATGAAGATCGAAAGCCTTCAGAGGTGTTTAGGACA...TTGACCTTCTTCTTCCCTAACCACTGGCTCTTGAGCCAGCTTGGGATTTCCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR TCA 90 bp CATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCTACCCATTTGTTTTCTaGAGAATGCAGAATGCCACT +
Preference number: 4 (lower is better)
Translates to: HQSSPLANPMTSPKGFRIYPFVF*RMQNAT
Trigger: AGTGGCATTCTGCATTCTTCAGAAAACAAATGGGTA...GATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR TCA 90 bp ACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATATTTTTCTGTTGTGCTaGTATGAGACGTGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: TSELSSSKPNDEPKGLPHIFLLC*YETCFC
Trigger: GCAGAAGCACGTCTCATATCAGCACAACAGAAAAAT...ATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR TCA 90 bp CCACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCGATTATAGTTTACTTTaGTTAGGGAGCCATTGCACT +
Preference number: 4 (lower is better)
Translates to: PHQSSPLANPMTSPKGFRDYSLL*LGSHCT
Trigger: AGTGCAATGGCTCCCTAATCAAAGTAAACTATAATC...GCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR TCA 90 bp CCCCCACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCGATTATAGTTTACTTTaGTTAGGGAGCCATTGCACT +
Preference number: 4 (lower is better)
Translates to: PPHQSSPLANPMTSPKGFDYSLL*LGSHCT
Trigger: AGTGCAATGGCTCCCTAATCAAAGTAAACTATAATC...GAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGTGGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR TCA 90 bp TCTCCCCCACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCGGCTATAAAAATTCATaGGGCTTATTTAAGCCTTGC +
Preference number: 4 (lower is better)
Translates to: SPPHQSSPLANPMTSPKGGYKNS*GLFKPC
Trigger: GCAAGGCTTAAATAAGCCTCATGAATTTTTATAGCC...GCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGTGGGGGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR TCA 90 bp CAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTTTTTCAATTTTAGCTaGATGGACACCAAGCTAGGC +
Preference number: 4 (lower is better)
Translates to: QSSPLANPMTSPKGFRIIFFNFS*MDTKLG
Trigger: GCCTAGCTTGGTGTCCATTCAGCTAAAATTGAAAAA...GATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR TCA 90 bp ACGCCTCATTATTCCTGTAGCAGGAAGGGACGTCCAGACGGGACTCCAGAGGTGAAGACACACCCCATTTaGTCTTACAAAACAGTAAAG +
Preference number: 4 (lower is better)
Translates to: TPHYSCSRKGRPDGTPEVKTHPI*SYKTVK
Trigger: CTTTACTGTTTTGTAAGATCAAATGGGGTGTGTCTT...CACCTCTGGAGTCCCGTCTGGACGTCCCTTCCTGCTACAGGAATAATGAGGCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR GCA 90 bp TCAACTCCTTGGGTCATTTTCTTGGGGCTCATTCACTCTAGCTCTAGAATGAAGCAGAATCCTCACTGCTaGTGGGAAGGCGACCTCGTT +
Preference number: 4 (lower is better)
Translates to: STPWVIFLGLIHSSSRMKQNPHC*WEGDLV
Trigger: AACGAGGTCGCCTTCCCAGCAGCAGTGAGGATTCTG...CTTCATTCTAGAGCTAGAGTGAATGAGCCCCAAGAAAATGACCCAAGGAGTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR GCA 90 bp GCCAACAGCCACGACATTCAGCAATCTCAGTGTGACAAACAACACATCTGTAGCGGTCAGTTCCAGCCATaGAGCATCCATGTCATTGAG +
Preference number: 4 (lower is better)
Translates to: ANSHDIQQSQCDKQHICSGQFQP*SIHVIE
Trigger: CTCAATGACATGGATGCTGCATGGCTGGAACTGACC...GCTACAGATGTGTTGTTTGTCACACTGAGATTGCTGAATGTCGTGGCTGTTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR GCA 90 bp TCAACTCCTTGGGTCATTTTCTTGGGGCTCATTCACTCTAGCTCTAGAATGAAGAACTGCTGCAGCTTCTaGTTACGGACACTCACCCGG +
Preference number: 4 (lower is better)
Translates to: STPWVIFLGLIHSSSRMKNCCSF*LRTLTR
Trigger: CCGGGTGAGTGTCCGTAAGCAGAAGCTGCAGCAGTT...CTTCATTCTAGAGCTAGAGTGAATGAGCCCCAAGAAAATGACCCAAGGAGTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR GCA 90 bp CCAACAGCCACGACATTCAGCAATCTCAGTGTGACAAACAACACATCTGTAGCGAACTCATCCTCCAACTaGTGCAGCTTCTGCTTACGG +
Preference number: 4 (lower is better)
Translates to: PTATTFSNLSVTNNTSVANSSSN*CSFCLR
Trigger: CCGTAAGCAGAAGCTGCAGCAGTTGGAGGATGAGTT...CGCTACAGATGTGTTGTTTGTCACACTGAGATTGCTGAATGTCGTGGCTGTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR GCA 90 bp GTCCCATATCCACAACCCACTCACAGGCTTCAAGCAGCAGGACCTTGCCATATTCTAAATAAGACATCCTaGTCCCGCTTGGCTAGATTG +
Preference number: 4 (lower is better)
Translates to: VPYPQPTHRLQAAGPCHILNKTS*SRLARL
Trigger: CAATCTAGCCAAGCGGGAGCAGGATGTCTTATTTAG...AATATGGCAAGGTCCTGCTGCTTGAAGCCTGTGAGTGGGTTGTGGATATGGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp ACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCTGAAGAATGCAGAATaGCACTTCAAGTCCTCTATC +
Preference number: 4 (lower is better)
Translates to: TSELSSSKPNDEPKGLPHLKNAE*HFKSSI
Trigger: GATAGAGGACTTGAAGTGGCATTCTGCATTCTTCAG...ATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp CCCACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGTGTAGGCACTTTGACTaGAGTCTGATTATAGTTTAC +
Preference number: 4 (lower is better)
Translates to: PTSELSSSKPNDEPKGLPCRHFD*SLIIVY
Trigger: GTAAACTATAATCAGACTGCAGTCAAAGTGCCTACA...CGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp TCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTGAAGCTTCAGAGCTaGTGCCTATATGCTATAATG +
Preference number: 4 (lower is better)
Translates to: SELSSSKPNDEPKGLPHHLKLQS*CLYAIM
Trigger: CATTATAGCATATAGGCAGCAGCTCTGAAGCTTCAG...ATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp TGTACTATTGGAAGCCAGATGGCCAGGTATTGGCAATGGCCAGGGAAATCCCAACCTAAATCTCCATATTaGAGCAGCTCTACCCTGTCC +
Preference number: 4 (lower is better)
Translates to: CTIGSQMARYWQWPGKSQPKSPY*SSSTLS
Trigger: GGACAGGGTAGAGCTGCTGCAATATGGAGATTTAGG...TTGGGATTTCCCTGGCCATTGCCAATACCTGGCCATCTGGCTTCCAATAGTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp TCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTCTGTTAGATTCCCTAACATATaGACTAGTGGTTGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: SPLANPMTSPKGFRIISVRFPNI*TSGWLW
Trigger: CCAGAGCCAACCACTAGTGCATATGTTAGGGAATCT...AACAGAGATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp TCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTCTGTTGTCAATCTAAAAACCTaGATCATTCTTCCCCCTCCC +
Preference number: 4 (lower is better)
Translates to: SPLANPMTSPKGFRIISVVNLKT*IILPPP
Trigger: GGGAGGGGGAAGAATGATGCAGGTTTTTAGATTGAC...AACAGAGATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp GTCCCATATCCACAACCCACTCACAGGCTTCAAGCAGCAGGACCTTGCCATATTGTCAATCTAAAAACCTaGATCATTCTTCCCCCTCCC +
Preference number: 4 (lower is better)
Translates to: VPYPQPTHRLQAAGPCHIVNLKT*IILPPP
Trigger: GGGAGGGGGAAGAATGATGCAGGTTTTTAGATTGAC...AATATGGCAAGGTCCTGCTGCTTGAAGCCTGTGAGTGGGTTGTGGATATGGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp CAGGGAAATCCCAAGCTGGCTCAAGAGCCAGTGGTTAGGGAAGAAGAAGGTCAAGTCAATCTAAAAACCTaGATCATTCTTCCCCCTCCC +
Preference number: 4 (lower is better)
Translates to: QGNPKLAQEPVVREEEGQVNLKT*IILPPP
Trigger: GGGAGGGGGAAGAATGATGCAGGTTTTTAGATTGAC...TTGACCTTCTTCTTCCCTAACCACTGGCTCTTGAGCCAGCTTGGGATTTCCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp CTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTCTGTGAACCTTCTATTATCTaGAGCAACAAGCTGATCTGG +
Preference number: 4 (lower is better)
Translates to: LSSSKPNDEPKGLPHHLCEPSII*SNKLIW
Trigger: CCAGATCAGCTTGTTGCTGCAGATAATAGAAGGTTC...ACAGAGATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp GTGTCGGGCTGGCATAAAGGCTTCTTACCAGGATTCCAGTTTATCCTTCTCAATGCCAGTGAGCAGCCGTaGTTAGCTTCCTTCATAAGC +
Preference number: 4 (lower is better)
Translates to: VSGWHKGFLPGFQFILLNASEQP*LASFIS
Trigger: GCTTATGAAGGAAGCTAAGCACGGCTGCTCACTGGC...ATTGAGAAGGATAAACTGGAATCCTGGTAAGAAGCCTTTATGCCAGCCCGACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR GCA 90 bp CCAACAGCCACGACATTCAGCAATCTCAGTGTGACAAACAACACATCTGTAGCGTTGGGTACCTTTCAGTaGAGACTGCTTCAGGCCAGA +
Preference number: 4 (lower is better)
Translates to: PTATTFSNLSVTNNTSVALGTFQ*RLLQAR
Trigger: TCTGGCCTGAAGCAGTCTGCACTGAAAGGTACCCAA...CGCTACAGATGTGTTGTTTGTCACACTGAGATTGCTGAATGTCGTGGCTGTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR GCA 90 bp CTGAGAGTATATGACTGGCTATCATTTCTTGCTCTGGGCGAGCGTTCGCCTCTTAAAGCCTCACAAAACTaGTCCAGGATCCTGCCTCTT +
Preference number: 4 (lower is better)
Translates to: LRVYDWLSFLALGERSPLKASQN*SRILPL
Trigger: AAGAGGCAGGATCCTGGAGCAGTTTTGTGAGGCTTT...AAGAGGCGAACGCTCGCCCAGAGCAAGAAATGATAGCCAGTCATATACTCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR CCA 90 bp AATCCCAAGCTGGCTCAAGAGCCAGTGGTTAGGGAAGAAGAAGGTCAAGTGGACTTCGATCTTCATGTCTaGAGCAGGAGCTTCTCCTAT +
Preference number: 4 (lower is better)
Translates to: NPKLAQEPVVREEEGQVDFDLHV*SRSFSY
Trigger: ATAGGAGAAGCTCCTGCTCCAGACATGAAGATCGAA...GTCCACTTGACCTTCTTCTTCCCTAACCACTGGCTCTTGAGCCAGCTTGGGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp TCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTCTGTTTTCGATCTTCATGTCTaGAGCAGGAGCTTCTCCTAT +
Preference number: 4 (lower is better)
Translates to: SPLANPMTSPKGFRIISVFDLHV*SRSFSY
Trigger: ATAGGAGAAGCTCCTGCTCCAGACATGAAGATCGAA...AACAGAGATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp TCTAGTCTTAGCAGTGTCTTATGGTTACAATCTACTCTTCTGTTTCCTCAACAACCACAGGCTGAGGGATaGTCCCCGGGCTCACAGGCA +
Preference number: 4 (lower is better)
Translates to: SSLSSVLWLQSTLLFPQQPQAEG*SPGSQA
Trigger: TGCCTGTGAGCCCGGGGACCATCCCTCAGCCTGTGG...TTGTTGAGGAAACAGAAGAGTAGATTGTAACCATAAGACACTGCTAAGACTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp GTCCCATATCCACAACCCACTCACAGGCTTCAAGCAGCAGGACCTTGCCATATTCTAGGACCCTCTCCATaGTGTATTCATCTAGTTCAG +
Preference number: 4 (lower is better)
Translates to: VPYPQPTHRLQAAGPCHILGPSP*CIHLVQ
Trigger: CTGAACTAGATGAATACACCATGGAGAGGGTCCTAG...AATATGGCAAGGTCCTGCTGCTTGAAGCCTGTGAGTGGGTTGTGGATATGGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp ACACTTCAGTCTCTTTCCTGTATAACCTTGGTCAATAGTAAGAGCTTATCGCAAGCGCCCACCGGCTGCTaGGAATGTGTGACACCTTGG +
Preference number: 4 (lower is better)
Translates to: TLQSLSCITLVNSKSLSQAPTGC*ECVTPW
Trigger: CCAAGGTGTCACACATTCCCAGCAGCCGGTGGGCGC...TTGCGATAAGCTCTTACTATTGACCAAGGTTATACAGGAAAGAGACTGAAGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp GTGTCGGGCTGGCATAAAGGCTTCTTACCAGGATTCCAGTTTATCCTTCTCAATAAAGCACAGGTCACATaGAAGGCTGTGCGGCAGTTC +
Preference number: 4 (lower is better)
Translates to: VSGWHKGFLPGFQFILLNKAQVT*KAVRQF
Trigger: GAACTGCCGCACAGCCTTCCATGTGACCTGTGCTTT...ATTGAGAAGGATAAACTGGAATCCTGGTAAGAAGCCTTTATGCCAGCCCGACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR CCA 90 bp AAGGAAATGCCAGCAGCTGAGGCTCGGCAGCCAACAGCCACGACATTCAGCAATTTCAACTTCCAGTACTaGTACAGGAAATCCACTACT +
Preference number: 4 (lower is better)
Translates to: KEMPAAEARQPTATTFSNFNFQY*YRKSTT
Trigger: AGTAGTGGATTTCCTGTACCAGTACTGGAAGTTGAA...ATTGCTGAATGTCGTGGCTGTTGGCTGCCGAGCCTCAGCTGCTGGCATTTCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR CCA 90 bp GACTCCATAGCTCATGCACCCCAATTACAGCAGGTGTCGGGCTGGCATAAAGGCTTCAACTTCCAGTACTaGTACAGGAAATCCACTACT +
Preference number: 4 (lower is better)
Translates to: DSIAHAPQLQQVSGWHKGFNFQY*YRKSTT
Trigger: AGTAGTGGATTTCCTGTACCAGTACTGGAAGTTGAA...GCCTTTATGCCAGCCCGACACCTGCTGTAATTGGGGTGCATGAGCTATGGAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR CCA 90 bp CATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCTTCAACTTCCAGTACTaGTACAGGAAATCCACTACT +
Preference number: 4 (lower is better)
Translates to: HQSSPLANPMTSPKGFRIFNFQY*YRKSTT
Trigger: AGTAGTGGATTTCCTGTACCAGTACTGGAAGTTGAA...GATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp CAGGGAAATCCCAAGCTGGCTCAAGAGCCAGTGGTTAGGGAAGAAGAAGGTCAACTCTTCATCTTTCTTTaGGGTGATCAGGGGCTTGTT +
Preference number: 4 (lower is better)
Translates to: QGNPKLAQEPVVREEEGQLFIFL*GDQGLV
Trigger: AACAAGCCCCTGATCACCCCAAAGAAAGATGAAGAG...TTGACCTTCTTCTTCCCTAACCACTGGCTCTTGAGCCAGCTTGGGATTTCCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp TCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATTTGAATATCTGTTCCTaGACTTTGCACACAGACCGT +
Preference number: 4 (lower is better)
Translates to: SELSSSKPNDEPKGLPHHLNICS*TLHTDR
Trigger: ACGGTCTGTGTGCAAAGTCCAGGAACAGATATTCAA...ATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp CCCACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCTTAGCAGTGTCTTATaGTTACAATCTACTCTTCTG +
Preference number: 4 (lower is better)
Translates to: PTSELSSSKPNDEPKGLPLSSVL*LQSTLL
Trigger: CAGAAGAGTAGATTGTAACCATAAGACACTGCTAAG...CGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp CTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTCTGTTTTATGGGCTGTGAATaGTACCATGAGGGTTTCTCA +
Preference number: 4 (lower is better)
Translates to: LSSSKPNDEPKGLPHHLCFMGCE*YHEGFS
Trigger: TGAGAAACCCTCATGGTACCATTCACAGCCCATAAA...ACAGAGATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp AATCCCAAGCTGGCTCAAGAGCCAGTGGTTAGGGAAGAAGAAGGTCAAGTGGACGGAATCCATTCATGTTaGAAGCCCAGATTCCCTAAC +
Preference number: 4 (lower is better)
Translates to: NPKLAQEPVVREEEGQVDGIHSC*KPRFPN
Trigger: GTTAGGGAATCTGGGCTTCCAACATGAATGGATTCC...GTCCACTTGACCTTCTTCTTCCCTAACCACTGGCTCTTGAGCCAGCTTGGGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp CCACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATGTCGTACATACAATaGGGATGTATCAGATCTACT +
Preference number: 4 (lower is better)
Translates to: PHQSSPLANPMTSPKGFRMSYIQ*GCIRST
Trigger: AGTAGATCTGATACATCCCCATTGTATGTACGACAT...GCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp CCCACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGATGTCGTACATACAATaGGGATGTATCAGATCTACT +
Preference number: 4 (lower is better)
Translates to: PTSELSSSKPNDEPKGLPMSYIQ*GCIRST
Trigger: AGTAGATCTGATACATCCCCATTGTATGTACGACAT...CGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp CAAAGTCTTCTTTACACTCACCACCAGGGGGCGTATGGGAGCACAAAAGCCTCACTTGGGTCATTTTCTTaGGGCTCATTCACTCTAGCT +
Preference number: 4 (lower is better)
Translates to: QSLLYTHHQGAYGSTKASLGSFS*GSFTLA
Trigger: AGCTAGAGTGAATGAGCCCCAAGAAAATGACCCAAG...TGAGGCTTTTGTGCTCCCATACGCCCCCTGGTGGTGAGTGTAAAGAAGACTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR CCA 90 bp TCAACTCCTTGGGTCATTTTCTTGGGGCTCATTCACTCTAGCTCTAGAATGAAGCGTGCTGAGCATGACTaGGGCTCCTCAGACAGATCT +
Preference number: 4 (lower is better)
Translates to: STPWVIFLGLIHSSSRMKRAEHD*GSSDRS
Trigger: AGATCTGTCTGAGGAGCCCCAGTCATGCTCAGCACG...CTTCATTCTAGAGCTAGAGTGAATGAGCCCCAAGAAAATGACCCAAGGAGTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR CCA 90 bp GAGAGGCAAAGTCTTCTTTACACTCACCACCAGGGGGCGTATGGGAGCACAAAAAATCCTAACCTGGTCTaGGAAGGGGCATCACAAATA +
Preference number: 4 (lower is better)
Translates to: ERQSLLYTHHQGAYGSTKNPNLV*EGASQI
Trigger: TATTTGTGATGCCCCTTCCCAGACCAGGTTAGGATT...TTTTGTGCTCCCATACGCCCCCTGGTGGTGAGTGTAAAGAAGACTTTGCCTCTC
49% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
3UTR CAA 72 bp AACAGTCACCAGAGTCTGGAAGTTCTTCGCTTGAACTaGAGTAGCCACTGTACTATTGGAAGCCAGATGGCC +
Preference number: 4 (lower is better)
Translates to: NSHQSLEVLRLN*SSHCTIGSQMA
Trigger: GGCCATCTGGCTTCCAATAGTACAGTGGCTACTCAAGTTCAAGCGAAGAACTTCCAGACTCTGGTGACTGTT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR TCA 90 bp TCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTCTGTTATTTTTCTGTTGTGCTaGTATGAGACGTGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: SPLANPMTSPKGFRIISVIFLLC*YETCFC
Trigger: GCAGAAGCACGTCTCATATCAGCACAACAGAAAAAT...AACAGAGATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR TCA 90 bp TTCCTAATAGTGCAAATGAATCTGATACCTCTTAAAATGGTGAGAGGTCATACACCTTGTGCCAGGTGCTaGCTGCCCCACTCCAGGGGA +
Preference number: 4 (lower is better)
Translates to: FLIVQMNLIPLKMVRGHTPCARC*LPHSRG
Trigger: TCCCCTGGAGTGGGGCAGTCAGCACCTGGCACAAGG...TGTATGACCTCTCACCATTTTAAGAGGTATCAGATTCATTTGCACTATTAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR TCA 90 bp GAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTCGGCTATAAAAATTCATaGGGCTTATTTAAGCCTTGC +
Preference number: 4 (lower is better)
Translates to: ELSSSKPNDEPKGLPHHLGYKNS*GLFKPC
Trigger: GCAAGGCTTAAATAAGCCTCATGAATTTTTATAGCC...GAGATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR TCA 90 bp CAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTACCTCTTAAAATGGTaGGAGGTCATACACTTACTA +
Preference number: 4 (lower is better)
Translates to: QSSPLANPMTSPKGFRIIYLLKW*EVIHLL
Trigger: TAGTAAGTGTATGACCTCTCACCATTTTAAGAGGTA...GATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR TCA 90 bp ACTGTTTCAGGCCACTTGGGTACCTTTCAGTGCAGACTGCTTCAGGCCAGAAAAGGGTCTGAGAGTATATaGCTGGCTATCATTTCTTGC +
Preference number: 4 (lower is better)
Translates to: TVSGHLGTFQCRLLQARKGSESI*LAIISC
Trigger: GCAAGAAATGATAGCCAGTCATATACTCTCAGACCC...TTTTCTGGCCTGAAGCAGTCTGCACTGAAAGGTACCCAAGTGGCCTGAAACAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR TCA 90 bp CCAACAGCCACGACATTCAGCAATCTCAGTGTGACAAACAACACATCTGTAGCGGTCTGTAAACCATCCTaGGTCAACTCCTTGGGTCAT +
Preference number: 4 (lower is better)
Translates to: PTATTFSNLSVTNNTSVAVCKPS*VNSLGH
Trigger: ATGACCCAAGGAGTTGACTCAGGATGGTTTACAGAC...CGCTACAGATGTGTTGTTTGTCACACTGAGATTGCTGAATGTCGTGGCTGTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR TCA 90 bp GACAGTACTGGGAATTCCCCTGTGAATTACCCAAGAAACAAAGTGGGGGCCAGTTGTGTTTCCCCGGACTaGACAAGAAATTTTCCCATC +
Preference number: 4 (lower is better)
Translates to: DSTGNSPVNYPRNKVGASCVSPD*TRNFPI
Trigger: GATGGGAAAATTTCTTGTTCAGTCCGGGGAAACACA...ACTGGCCCCCACTTTGTTTCTTGGGTAATTCACAGGGGAATTCCCAGTACTGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR TCA 90 bp TTCTCATCTCTAACAAAAATGCCACACATACATGTAGTTGTGAGAGGCAAAGTCACGGGACTCCAGAGGTaGTGGAAAGTGGGGGAGGCA +
Preference number: 4 (lower is better)
Translates to: FSSLTKMPHIHVVVRGKVTGLQR*WKVGEA
Trigger: TGCCTCCCCCACTTTCCATCACCTCTGGAGTCCCGT...GACTTTGCCTCTCACAACTACATGTATGTGTGGCATTTTTGTTAGAGATGAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR GCA 90 bp TTCCTAATAGTGCAAATGAATCTGATACCTCTTAAAATGGTGAGAGGTCATACAAAACAGCAGGCAGCCTaGTGCGGAGGGGTTCGGCCG +
Preference number: 4 (lower is better)
Translates to: FLIVQMNLIPLKMVRGHTKQQAA*CGGVRP
Trigger: CGGCCGAACCCCTCCGCAGCAGGCTGCCTGCTGTTT...TGTATGACCTCTCACCATTTTAAGAGGTATCAGATTCATTTGCACTATTAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000226319.11
ENST00000452328.6
CDS-3UTR GCA 90 bp AGTCACCAGAGTCTGGAAGTTCTTCGCTTGAACTTGAGTAGCCACTGTACTATTCAGGAGCTTCTCCTATaGTGGGATCGGGAATTCTGG +
Preference number: 4 (lower is better)
Translates to: SHQSLEVLRLNLSSHCTIQELLL*WDREFW
Trigger: CCAGAATTCCCGATCCCAGCATAGGAGAAGCTCCTG...AATAGTACAGTGGCTACTCAAGTTCAAGCGAAGAACTTCCAGACTCTGGTGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp ACACTTCAGTCTCTTTCCTGTATAACCTTGGTCAATAGTAAGAGCTTATCGCAATCTCATTGCAGAGGCTaGACACTAGCGCCCACCGGC +
Preference number: 4 (lower is better)
Translates to: TLQSLSCITLVNSKSLSQSHCRG*TLAPTG
Trigger: GCCGGTGGGCGCTAGTGTGCAGCCTCTGCAATGAGA...TTGCGATAAGCTCTTACTATTGACCAAGGTTATACAGGAAAGAGACTGAAGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp TTCTCATCTCTAACAAAAATGCCACACATACATGTAGTTGTGAGAGGCAAAGTCCCTGTGCAGCCCCCTTaGCAAGACTCTCCTCGGGTT +
Preference number: 4 (lower is better)
Translates to: FSSLTKMPHIHVVVRGKVPVQPP*QDSPRV
Trigger: AACCCGAGGAGAGTCTTGGCAAGGGGGCTGCACAGG...GACTTTGCCTCTCACAACTACATGTATGTGTGGCATTTTTGTTAGAGATGAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR GCA 90 bp CAGGGAAATCCCAAGCTGGCTCAAGAGCCAGTGGTTAGGGAAGAAGAAGGTCAACTGAAGAATGCAGAATaGCACTTCAAGTCCTCTATC +
Preference number: 4 (lower is better)
Translates to: QGNPKLAQEPVVREEEGQLKNAE*HFKSSI
Trigger: GATAGAGGACTTGAAGTGGCATTCTGCATTCTTCAG...TTGACCTTCTTCTTCCCTAACCACTGGCTCTTGAGCCAGCTTGGGATTTCCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp CATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCTGTAGGCACTTTGACTaGAGTCTGATTATAGTTTAC +
Preference number: 4 (lower is better)
Translates to: HQSSPLANPMTSPKGFRICRHFD*SLIIVY
Trigger: GTAAACTATAATCAGACTGCAGTCAAAGTGCCTACA...GATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp ACACTTCAGTCTCTTTCCTGTATAACCTTGGTCAATAGTAAGAGCTTATCGCAAGCCTCTCCCTGCTGCTaGCGTTCCCCCTTCTTTGGA +
Preference number: 4 (lower is better)
Translates to: TLQSLSCITLVNSKSLSQASPCC*RSPFFG
Trigger: TCCAAAGAAGGGGGAACGGCAGCAGCAGGGAGAGGC...TTGCGATAAGCTCTTACTATTGACCAAGGTTATACAGGAAAGAGACTGAAGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp TCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATAAGCTTCAGAGCTGCTaGCTATATGCTATAATGCAA +
Preference number: 4 (lower is better)
Translates to: SELSSSKPNDEPKGLPHHKLQSC*LYAIMQ
Trigger: TTGCATTATAGCATATAGGCAGCAGCTCTGAAGCTT...ATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp GTCCCATATCCACAACCCACTCACAGGCTTCAAGCAGCAGGACCTTGCCATATTCTGAAGCTTCAGAGCTaGTGCCTATATGCTATAATG +
Preference number: 4 (lower is better)
Translates to: VPYPQPTHRLQAAGPCHILKLQS*CLYAIM
Trigger: CATTATAGCATATAGGCAGCAGCTCTGAAGCTTCAG...AATATGGCAAGGTCCTGCTGCTTGAAGCCTGTGAGTGGGTTGTGGATATGGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp AATCCCAAGCTGGCTCAAGAGCCAGTGGTTAGGGAAGAAGAAGGTCAAGTGGACGAACCTTCTATTATCTaGAGCAACAAGCTGATCTGG +
Preference number: 4 (lower is better)
Translates to: NPKLAQEPVVREEEGQVDEPSII*SNKLIW
Trigger: CCAGATCAGCTTGTTGCTGCAGATAATAGAAGGTTC...GTCCACTTGACCTTCTTCTTCCCTAACCACTGGCTCTTGAGCCAGCTTGGGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp CAGGGAAATCCCAAGCTGGCTCAAGAGCCAGTGGTTAGGGAAGAAGAAGGTCAAGAACCTTCTATTATCTaGAGCAACAAGCTGATCTGG +
Preference number: 4 (lower is better)
Translates to: QGNPKLAQEPVVREEEGQEPSII*SNKLIW
Trigger: CCAGATCAGCTTGTTGCTGCAGATAATAGAAGGTTC...TTGACCTTCTTCTTCCCTAACCACTGGCTCTTGAGCCAGCTTGGGATTTCCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp GAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTCATTTCTTGGTCAGGATaGACAAGGAAAGATAAAGCT +
Preference number: 4 (lower is better)
Translates to: ELSSSKPNDEPKGLPHHLISWSG*TRKDKA
Trigger: AGCTTTATCTTTCCTTGTGCATCCTGACCAAGAAAT...GAGATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp AGCAGGTGTCGGGCTGGCATAAAGGCTTCTTACCAGGATTCCAGTTTATCCTTCGAGCGTTCGCCTCTTTaGATCTTCTTCTCTAAGTCA +
Preference number: 4 (lower is better)
Translates to: SRCRAGIKASYQDSSLSFERSPL*IFFSKS
Trigger: TGACTTAGAGAAGAAGATGCAAAGAGGCGAACGCTC...GAAGGATAAACTGGAATCCTGGTAAGAAGCCTTTATGCCAGCCCGACACCTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR CCA 90 bp TCAACTCCTTGGGTCATTTTCTTGGGGCTCATTCACTCTAGCTCTAGAATGAAGGAGCTTCTCCTATGCTaGGATCGGGAATTCTGGGAC +
Preference number: 4 (lower is better)
Translates to: STPWVIFLGLIHSSSRMKELLLC*DREFWD
Trigger: GTCCCAGAATTCCCGATCCCAGCATAGGAGAAGCTC...CTTCATTCTAGAGCTAGAGTGAATGAGCCCCAAGAAAATGACCCAAGGAGTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR CCA 90 bp ATAGCTCATGCACCCCAATTACAGCAGGTGTCGGGCTGGCATAAAGGCTTCTTATTCGATCTTCATGTCTaGAGCAGGAGCTTCTCCTAT +
Preference number: 4 (lower is better)
Translates to: IAHAPQLQQVSGWHKGFLFDLHV*SRSFSY
Trigger: ATAGGAGAAGCTCCTGCTCCAGACATGAAGATCGAA...TAAGAAGCCTTTATGCCAGCCCGACACCTGCTGTAATTGGGGTGCATGAGCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR CCA 90 bp ACTGTTTCAGGCCACTTGGGTACCTTTCAGTGCAGACTGCTTCAGGCCAGAAAACTAGGACCCTCTCCATaGTGTATTCATCTAGTTCAG +
Preference number: 4 (lower is better)
Translates to: TVSGHLGTFQCRLLQARKLGPSP*CIHLVQ
Trigger: CTGAACTAGATGAATACACCATGGAGAGGGTCCTAG...TTTTCTGGCCTGAAGCAGTCTGCACTGAAAGGTACCCAAGTGGCCTGAAACAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR CCA 90 bp TCAACTCCTTGGGTCATTTTCTTGGGGCTCATTCACTCTAGCTCTAGAATGAAGAGAGCACAGCTAACGTaGACCCACTTGGTTCCGCTA +
Preference number: 4 (lower is better)
Translates to: STPWVIFLGLIHSSSRMKRAQLT*THLVPL
Trigger: TAGCGGAACCAAGTGGGTCCACGTTAGCTGTGCTCT...CTTCATTCTAGAGCTAGAGTGAATGAGCCCCAAGAAAATGACCCAAGGAGTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR CCA 90 bp CCACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCAAGAAGAAGGTCAAGTaGACTGGTAAAAATTCTACT +
Preference number: 4 (lower is better)
Translates to: PHQSSPLANPMTSPKGFRKKKVK*TGKNST
Trigger: AGTAGAATTTTTACCAGTCCACTTGACCTTCTTCTT...GCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp TCTCCCCCACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCAAGAAGAAGGTCAAGTaGACTGGTAAAAATTCTACT +
Preference number: 4 (lower is better)
Translates to: SPPHQSSPLANPMTSPKGKKKVK*TGKNST
Trigger: AGTAGAATTTTTACCAGTCCACTTGACCTTCTTCTT...GCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGTGGGGGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp AGTCACCAGAGTCTGGAAGTTCTTCGCTTGAACTTGAGTAGCCACTGTACTATTCAGATGGCCAGGTATTaGCAATGGCCAGGGAAATCC +
Preference number: 4 (lower is better)
Translates to: SHQSLEVLRLNLSSHCTIQMARY*QWPGKS
Trigger: GGATTTCCCTGGCCATTGCCAATACCTGGCCATCTG...AATAGTACAGTGGCTACTCAAGTTCAAGCGAAGAACTTCCAGACTCTGGTGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp TGTACTATTGGAAGCCAGATGGCCAGGTATTGGCAATGGCCAGGGAAATCCCAAATATGCACTAGTGGTTaGCTCTGGGAAGTAACAGTC +
Preference number: 4 (lower is better)
Translates to: CTIGSQMARYWQWPGKSQICTSG*LWEVTV
Trigger: GACTGTTACTTCCCAGAGCCAACCACTAGTGCATAT...TTGGGATTTCCCTGGCCATTGCCAATACCTGGCCATCTGGCTTCCAATAGTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp TCTCCCCCACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCACTTGCATAGCAAGATaGGATTCAATAAGCCTTTTT +
Preference number: 4 (lower is better)
Translates to: SPPHQSSPLANPMTSPKGTCIAR*DSISLF
Trigger: AAAAAGGCTTATTGAATCCCATCTTGCTATGCAAGT...GCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGTGGGGGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp GACTCCAGAGGTGATGGAAAGTGGGGGAGGCACAAAAGCAGCAAACAGCAGAAGATAACTGCAACTCTCTaGGCAAGGCAAAGATTTCAA +
Preference number: 4 (lower is better)
Translates to: DSRGDGKWGRHKSSKQQKITATL*ARQRFQ
Trigger: TTGAAATCTTTGCCTTGCCCAGAGAGTTGCAGTTAT...CTTCTGCTGTTTGCTGCTTTTGTGCCTCCCCCACTTTCCATCACCTCTGGAGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413543.6
CDS-3UTR TCA 90 bp TTCAGTTCGGGTTCTAGTCTTAGCAGTGTCTTATGGTTACAATCTACTCTTCTGCTGGGACCAAGTAGTTaGCAGGCTGCCATTGTCGTC +
Preference number: 4 (lower is better)
Translates to: FSSGSSLSSVLWLQSTLLLGPSS*QAAIVV
Trigger: GACGACAATGGCAGCCTGTCAACTACTTGGTCCCAG...CAGAAGAGTAGATTGTAACCATAAGACACTGCTAAGACTAGAACCCGAACTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR TCA 90 bp GTGTCGGGCTGGCATAAAGGCTTCTTACCAGGATTCCAGTTTATCCTTCTCAATCAACATCCAGCAGGTTaGCGAAGGTGTAGAACTCAT +
Preference number: 4 (lower is better)
Translates to: VSGWHKGFLPGFQFILLNQHPAG*RRCRTH
Trigger: ATGAGTTCTACACCTTCGTCAACCTGCTGGATGTTG...ATTGAGAAGGATAAACTGGAATCCTGGTAAGAAGCCTTTATGCCAGCCCGACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR TCA 90 bp AGTCACCAGAGTCTGGAAGTTCTTCGCTTGAACTTGAGTAGCCACTGTACTATTAAGCATGTTTTCCAGTaGGGAGGAGGAGCAGGAAGA +
Preference number: 4 (lower is better)
Translates to: SHQSLEVLRLNLSSHCTIKHVFQ*GGGAGR
Trigger: TCTTCCTGCTCCTCCTCCTCACTGGAAAACATGCTT...AATAGTACAGTGGCTACTCAAGTTCAAGCGAAGAACTTCCAGACTCTGGTGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR TCA 90 bp TCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTCTGTTTACCCATTTGTTTTCTaGAGAATGCAGAATGCCACT +
Preference number: 4 (lower is better)
Translates to: SPLANPMTSPKGFRIISVYPFVF*RMQNAT
Trigger: AGTGGCATTCTGCATTCTTCAGAAAACAAATGGGTA...AACAGAGATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR TCA 90 bp CTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTCTGTGATTATAGTTTACTTTaGTTAGGGAGCCATTGCACT +
Preference number: 4 (lower is better)
Translates to: LSSSKPNDEPKGLPHHLCDYSLL*LGSHCT
Trigger: AGTGCAATGGCTCCCTAATCAAAGTAAACTATAATC...ACAGAGATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR TCA 90 bp CAGGGAAATCCCAAGCTGGCTCAAGAGCCAGTGGTTAGGGAAGAAGAAGGTCAAATCATCTGGAAGACTTaGAAGTTAACTGCAGAACTC +
Preference number: 4 (lower is better)
Translates to: QGNPKLAQEPVVREEEGQIIWKT*KLTAEL
Trigger: GAGTTCTGCAGTTAACTTTCAAGTCTTCCAGATGAT...TTGACCTTCTTCTTCCCTAACCACTGGCTCTTGAGCCAGCTTGGGATTTCCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR TCA 90 bp TTCAGGCATTCCCATCTCCTTAAATTCTTCATTGGTCAGTTCCAGCCATGCAGCTCAGACACAACCCTCTaGAGGCTTTCGATCTTCATG +
Preference number: 4 (lower is better)
Translates to: FRHSHLLKFFIGQFQPCSSDTTL*RLSIFM
Trigger: CATGAAGATCGAAAGCCTTCAGAGGGTTGTGTCTGA...GCTGCATGGCTGGAACTGACCAATGAAGAATTTAAGGAGATGGGAATGCCTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511925.5
CDS-3UTR GCA 90 bp TCAACTCCTTGGGTCATTTTCTTGGGGCTCATTCACTCTAGCTCTAGAATGAAGAGAACACCATCTCATTaGCGTCCTCACCATCAGGAG +
Preference number: 4 (lower is better)
Translates to: STPWVIFLGLIHSSSRMKRTPSH*RPHHQE
Trigger: CTCCTGATGGTGAGGACGGCAATGAGATGGTGTTCT...CTTCATTCTAGAGCTAGAGTGAATGAGCCCCAAGAAAATGACCCAAGGAGTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR GCA 90 bp GCAGCCAACAGCCACGACATTCAGCAATCTCAGTGTGACAAACAACACATCTGTCTAAATAAGACATCCTaGTCCCGCTTGGCTAGATTG +
Preference number: 4 (lower is better)
Translates to: AANSHDIQQSQCDKQHICLNKTS*SRLARL
Trigger: CAATCTAGCCAAGCGGGAGCAGGATGTCTTATTTAG...ACAGATGTGTTGTTTGTCACACTGAGATTGCTGAATGTCGTGGCTGTTGGCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR GCA 90 bp GAGACAAACACAGTCCAAACAATAGACTTCTTGTCCTCCCCCTCCCAACAACTAAGGTGCGTGAACAGCTaGAGCCTCCTAAATAAGACA +
Preference number: 4 (lower is better)
Translates to: ETNTVQTIDFLSSPSQQLRCVNS*SLLNKT
Trigger: TGTCTTATTTAGGAGGCTGCAGCTGTTCACGCACCT...TAGTTGTTGGGAGGGGGAGGACAAGAAGTCTATTGTTTGGACTGTGTTTGTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR GCA 90 bp GTCCCATATCCACAACCCACTCACAGGCTTCAAGCAGCAGGACCTTGCCATATTAAGCTTCAGAGCTGCTaGCTATATGCTATAATGCAA +
Preference number: 4 (lower is better)
Translates to: VPYPQPTHRLQAAGPCHIKLQSC*LYAIMQ
Trigger: TTGCATTATAGCATATAGGCAGCAGCTCTGAAGCTT...AATATGGCAAGGTCCTGCTGCTTGAAGCCTGTGAGTGGGTTGTGGATATGGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp ACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATGACTTGAAAGTTAACTaGAGAACTCCTCAAAGCATT +
Preference number: 4 (lower is better)
Translates to: TSELSSSKPNDEPKGLPHDLKVN*RTPQSI
Trigger: AATGCTTTGAGGAGTTCTGCAGTTAACTTTCAAGTC...ATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp TCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATGACTTGAAAGTTAACTaGAGAACTCCTCAAAGCATT +
Preference number: 4 (lower is better)
Translates to: SELSSSKPNDEPKGLPHHDLKVN*RTPQSI
Trigger: AATGCTTTGAGGAGTTCTGCAGTTAACTTTCAAGTC...ATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp TGTACTATTGGAAGCCAGATGGCCAGGTATTGGCAATGGCCAGGGAAATCCCAAGAACCTTCTATTATCTaGAGCAACAAGCTGATCTGG +
Preference number: 4 (lower is better)
Translates to: CTIGSQMARYWQWPGKSQEPSII*SNKLIW
Trigger: CCAGATCAGCTTGTTGCTGCAGATAATAGAAGGTTC...TTGGGATTTCCCTGGCCATTGCCAATACCTGGCCATCTGGCTTCCAATAGTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp GTCCCATATCCACAACCCACTCACAGGCTTCAAGCAGCAGGACCTTGCCATATTCTCACCCAGAGCTGTTaGTGTAATCAAAAGATAACT +
Preference number: 4 (lower is better)
Translates to: VPYPQPTHRLQAAGPCHILTQSC*CNQKIT
Trigger: AGTTATCTTTTGATTACAGCAACAGCTCTGGGTGAG...AATATGGCAAGGTCCTGCTGCTTGAAGCCTGTGAGTGGGTTGTGGATATGGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp GCAGCCAACAGCCACGACATTCAGCAATCTCAGTGTGACAAACAACACATCTGTGAGCGTTCGCCTCTTTaGATCTTCTTCTCTAAGTCA +
Preference number: 4 (lower is better)
Translates to: AANSHDIQQSQCDKQHICERSPL*IFFSKS
Trigger: TGACTTAGAGAAGAAGATGCAAAGAGGCGAACGCTC...ACAGATGTGTTGTTTGTCACACTGAGATTGCTGAATGTCGTGGCTGTTGGCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR CCA 90 bp TCAGAGCCTGATGACACGATGTACTTCTTGGGCCTGATGAACATGAGGGATTTCCTAGGACCCTCTCCATaGTGTATTCATCTAGTTCAG +
Preference number: 4 (lower is better)
Translates to: SEPDDTMYFLGLMNMRDFLGPSP*CIHLVQ
Trigger: CTGAACTAGATGAATACACCATGGAGAGGGTCCTAG...GAAATCCCTCATGTTCATCAGGCCCAAGAAGTACATCGTGTCATCAGGCTCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511925.5
CDS-3UTR CCA 90 bp ATAGTGCAAATGAATCTGATACCTCTTAAAATGGTGAGAGGTCATACACTTACTGCGCCCACCGGCTGCTaGGAATGTGTGACACCTTGG +
Preference number: 4 (lower is better)
Translates to: IVQMNLIPLKMVRGHTLTAPTGC*ECVTPW
Trigger: CCAAGGTGTCACACATTCCCAGCAGCCGGTGGGCGC...AGTAAGTGTATGACCTCTCACCATTTTAAGAGGTATCAGATTCATTTGCACTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp CCAACAGCCACGACATTCAGCAATCTCAGTGTGACAAACAACACATCTGTAGCGCTCTTCATCTTTCTTTaGGGTGATCAGGGGCTTGTT +
Preference number: 4 (lower is better)
Translates to: PTATTFSNLSVTNNTSVALFIFL*GDQGLV
Trigger: AACAAGCCCCTGATCACCCCAAAGAAAGATGAAGAG...CGCTACAGATGTGTTGTTTGTCACACTGAGATTGCTGAATGTCGTGGCTGTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR CCA 90 bp TTCAGTTCGGGTTCTAGTCTTAGCAGTGTCTTATGGTTACAATCTACTCTTCTGACCCAAAAAGCTCTCTaGGACCACCATCCCCTCCCT +
Preference number: 4 (lower is better)
Translates to: FSSGSSLSSVLWLQSTLLTQKAL*DHHPLP
Trigger: AGGGAGGGGATGGTGGTCCCAGAGAGCTTTTTGGGT...CAGAAGAGTAGATTGTAACCATAAGACACTGCTAAGACTAGAACCCGAACTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp CTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTCTGTCTTAGCAGTGTCTTATaGTTACAATCTACTCTTCTG +
Preference number: 4 (lower is better)
Translates to: LSSSKPNDEPKGLPHHLCLSSVL*LQSTLL
Trigger: CAGAAGAGTAGATTGTAACCATAAGACACTGCTAAG...ACAGAGATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp ACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCTTAGCAGTGTCTTATaGTTACAATCTACTCTTCTG +
Preference number: 4 (lower is better)
Translates to: TSELSSSKPNDEPKGLPHLSSVL*LQSTLL
Trigger: CAGAAGAGTAGATTGTAACCATAAGACACTGCTAAG...ATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp TCAACTCCTTGGGTCATTTTCTTGGGGCTCATTCACTCTAGCTCTAGAATGAAGCCTGAGTCAACTCCTTaGGTCATTTTCTTGGGGCTC +
Preference number: 4 (lower is better)
Translates to: STPWVIFLGLIHSSSRMKPESTP*VIFLGL
Trigger: GAGCCCCAAGAAAATGACCCAAGGAGTTGACTCAGG...CTTCATTCTAGAGCTAGAGTGAATGAGCCCCAAGAAAATGACCCAAGGAGTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR TCA 90 bp CAGTGGTTAGGGAAGAAGAAGGTCAAGTGGACTGGTAAAAATTCTACTTCAACTCAGCATCCATGTCATTaGGGTCATAGCGACACACGC +
Preference number: 4 (lower is better)
Translates to: QWLGKKKVKWTGKNSTSTQHPCH*GHSDTR
Trigger: GCGTGTGTCGCTATGACCTCAATGACATGGATGCTG...AGTTGAAGTAGAATTTTTACCAGTCCACTTGACCTTCTTCTTCCCTAACCACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR TCA 90 bp TCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTCTGTTGATTATAGTTTACTTTaGTTAGGGAGCCATTGCACT +
Preference number: 4 (lower is better)
Translates to: SPLANPMTSPKGFRIISVDYSLL*LGSHCT
Trigger: AGTGCAATGGCTCCCTAATCAAAGTAAACTATAATC...AACAGAGATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR TCA 90 bp TCTAGTCTTAGCAGTGTCTTATGGTTACAATCTACTCTTCTGTTTCCTCAACAACAAATATGGGTAGTCTaGGTGCTGGTGGCAGGCCCC +
Preference number: 4 (lower is better)
Translates to: SSLSSVLWLQSTLLFPQQQIWVV*VLVAGP
Trigger: GGGGCCTGCCACCAGCACTCAGACTACCCATATTTG...TTGTTGAGGAAACAGAAGAGTAGATTGTAACCATAAGACACTGCTAAGACTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR TCA 90 bp TCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTCTGTTGGCTATAAAAATTCATaGGGCTTATTTAAGCCTTGC +
Preference number: 4 (lower is better)
Translates to: SPLANPMTSPKGFRIISVGYKNS*GLFKPC
Trigger: GCAAGGCTTAAATAAGCCTCATGAATTTTTATAGCC...AACAGAGATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR TCA 90 bp CAGGGAAATCCCAAGCTGGCTCAAGAGCCAGTGGTTAGGGAAGAAGAAGGTCAATACCTCTTAAAATGGTaGGAGGTCATACACTTACTA +
Preference number: 4 (lower is better)
Translates to: QGNPKLAQEPVVREEEGQYLLKW*EVIHLL
Trigger: TAGTAAGTGTATGACCTCTCACCATTTTAAGAGGTA...TTGACCTTCTTCTTCCCTAACCACTGGCTCTTGAGCCAGCTTGGGATTTCCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR TCA 90 bp GTCCCATATCCACAACCCACTCACAGGCTTCAAGCAGCAGGACCTTGCCATATTTACCTCTTAAAATGGTaGGAGGTCATACACTTACTA +
Preference number: 4 (lower is better)
Translates to: VPYPQPTHRLQAAGPCHIYLLKW*EVIHLL
Trigger: TAGTAAGTGTATGACCTCTCACCATTTTAAGAGGTA...AATATGGCAAGGTCCTGCTGCTTGAAGCCTGTGAGTGGGTTGTGGATATGGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR TCA 90 bp TCAACTCCTTGGGTCATTTTCTTGGGGCTCATTCACTCTAGCTCTAGAATGAAGGTCTGTAAACCATCCTaGGTCAACTCCTTGGGTCAT +
Preference number: 4 (lower is better)
Translates to: STPWVIFLGLIHSSSRMKVCKPS*VNSLGH
Trigger: ATGACCCAAGGAGTTGACTCAGGATGGTTTACAGAC...CTTCATTCTAGAGCTAGAGTGAATGAGCCCCAAGAAAATGACCCAAGGAGTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR GCA 90 bp ACACTTCAGTCTCTTTCCTGTATAACCTTGGTCAATAGTAAGAGCTTATCGCAACAGAATCCTCACTGCTaGTGGGAAGGCGACCTCGTT +
Preference number: 4 (lower is better)
Translates to: TLQSLSCITLVNSKSLSQQNPHC*WEGDLV
Trigger: AACGAGGTCGCCTTCCCAGCAGCAGTGAGGATTCTG...TTGCGATAAGCTCTTACTATTGACCAAGGTTATACAGGAAAGAGACTGAAGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp ACACTTCAGTCTCTTTCCTGTATAACCTTGGTCAATAGTAAGAGCTTATCGCAAAACTGCTGCAGCTTCTaGTTACGGACACTCACCCGG +
Preference number: 4 (lower is better)
Translates to: TLQSLSCITLVNSKSLSQNCCSF*LRTLTR
Trigger: CCGGGTGAGTGTCCGTAAGCAGAAGCTGCAGCAGTT...TTGCGATAAGCTCTTACTATTGACCAAGGTTATACAGGAAAGAGACTGAAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp AGTCACCAGAGTCTGGAAGTTCTTCGCTTGAACTTGAGTAGCCACTGTACTATTCTTCCAGGGCTATTCTaGAAAGGATCTCGCTTATGG +
Preference number: 4 (lower is better)
Translates to: SHQSLEVLRLNLSSHCTILPGLF*KGSRLW
Trigger: CCATAAGCGAGATCCTTTGCAGAATAGCCCTGGAAG...AATAGTACAGTGGCTACTCAAGTTCAAGCGAAGAACTTCCAGACTCTGGTGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp AATCCCAAGCTGGCTCAAGAGCCAGTGGTTAGGGAAGAAGAAGGTCAAGTGGACTGTAGGCACTTTGACTaGAGTCTGATTATAGTTTAC +
Preference number: 4 (lower is better)
Translates to: NPKLAQEPVVREEEGQVDCRHFD*SLIIVY
Trigger: GTAAACTATAATCAGACTGCAGTCAAAGTGCCTACA...GTCCACTTGACCTTCTTCTTCCCTAACCACTGGCTCTTGAGCCAGCTTGGGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp TTCCTAATAGTGCAAATGAATCTGATACCTCTTAAAATGGTGAGAGGTCATACAGCCTCTCCCTGCTGCTaGCGTTCCCCCTTCTTTGGA +
Preference number: 4 (lower is better)
Translates to: FLIVQMNLIPLKMVRGHTASPCC*RSPFFG
Trigger: TCCAAAGAAGGGGGAACGGCAGCAGCAGGGAGAGGC...TGTATGACCTCTCACCATTTTAAGAGGTATCAGATTCATTTGCACTATTAGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp TCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTCTGTTGACTTGAAAGTTAACTaGAGAACTCCTCAAAGCATT +
Preference number: 4 (lower is better)
Translates to: SPLANPMTSPKGFRIISVDLKVN*RTPQSI
Trigger: AATGCTTTGAGGAGTTCTGCAGTTAACTTTCAAGTC...AACAGAGATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp CTGAGAGTATATGACTGGCTATCATTTCTTGCTCTGGGCGAGCGTTCGCCTCTTTTTTATTGTCACCCCTaGCCTGATACACTTACTGTT +
Preference number: 4 (lower is better)
Translates to: LRVYDWLSFLALGERSPLFYCHP*PDTLTV
Trigger: AACAGTAAGTGTATCAGGGCAGGGGTGACAATAAAA...AAGAGGCGAACGCTCGCCCAGAGCAAGAAATGATAGCCAGTCATATACTCTCAG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000413543.6
CDS-3UTR CCA 90 bp ATTTTTAACCAACACAACCTCATGCTGTGGTGTGTACAAGGGTCTGAGAGTATAAATCCTCACTGCTGCTaGGAAGGCGACCTCGTTTCA +
Preference number: 4 (lower is better)
Translates to: IFNQHNLMLWCVQGSESINPHCC*EGDLVS
Trigger: TGAAACGAGGTCGCCTTCCCAGCAGCAGTGAGGATT...TATACTCTCAGACCCTTGTACACACCACAGCATGAGGTTGTGTTGGTTAAAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR CCA 90 bp TGTACTATTGGAAGCCAGATGGCCAGGTATTGGCAATGGCCAGGGAAATCCCAATTCAACTTCCAGTACTaGTACAGGAAATCCACTACT +
Preference number: 4 (lower is better)
Translates to: CTIGSQMARYWQWPGKSQFNFQY*YRKSTT
Trigger: AGTAGTGGATTTCCTGTACCAGTACTGGAAGTTGAA...TTGGGATTTCCCTGGCCATTGCCAATACCTGGCCATCTGGCTTCCAATAGTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp TCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTCTGTTCTTAGCAGTGTCTTATaGTTACAATCTACTCTTCTG +
Preference number: 4 (lower is better)
Translates to: SPLANPMTSPKGFRIISVLSSVL*LQSTLL
Trigger: CAGAAGAGTAGATTGTAACCATAAGACACTGCTAAG...AACAGAGATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp ACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATAAGAAGAAGGTCAAGTaGACTGGTAAAAATTCTACT +
Preference number: 4 (lower is better)
Translates to: TSELSSSKPNDEPKGLPHKKKVK*TGKNST
Trigger: AGTAGAATTTTTACCAGTCCACTTGACCTTCTTCTT...ATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp CAGTGGTTAGGGAAGAAGAAGGTCAAGTGGACTGGTAAAAATTCTACTTCAACTGCCAGGTATTGGCAATaGCCAGGGAAATCCCAAGCT +
Preference number: 4 (lower is better)
Translates to: QWLGKKKVKWTGKNSTSTARYWQ*PGKSQA
Trigger: AGCTTGGGATTTCCCTGGCCATTGCCAATACCTGGC...AGTTGAAGTAGAATTTTTACCAGTCCACTTGACCTTCTTCTTCCCTAACCACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp TCAACTCCTTGGGTCATTTTCTTGGGGCTCATTCACTCTAGCTCTAGAATGAAGTATCATTTCTTGCTCTaGGCGAGCGTTCGCCTCTTT +
Preference number: 4 (lower is better)
Translates to: STPWVIFLGLIHSSSRMKYHFLL*ASVRLF
Trigger: AAAGAGGCGAACGCTCGCCCAGAGCAAGAAATGATA...CTTCATTCTAGAGCTAGAGTGAATGAGCCCCAAGAAAATGACCCAAGGAGTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR CCA 90 bp TCTAGTCTTAGCAGTGTCTTATGGTTACAATCTACTCTTCTGTTTCCTCAACAAGAAACGGTTTTAAGATaGGAGCGGCAGCGGCGGCGA +
Preference number: 4 (lower is better)
Translates to: SSLSSVLWLQSTLLFPQQETVLR*ERQRRR
Trigger: TCGCCGCCGCTGCCGCTCCCATCTTAAAACCGTTTC...TTGTTGAGGAAACAGAAGAGTAGATTGTAACCATAAGACACTGCTAAGACTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611140.4
CDS-3UTR TCA 90 bp ACACTTCAGTCTCTTTCCTGTATAACCTTGGTCAATAGTAAGAGCTTATCGCAATGCCCTCTGGTACCTTaGGGATTCCATAACAGGCCT +
Preference number: 4 (lower is better)
Translates to: TLQSLSCITLVNSKSLSQCPLVP*GFHNRP
Trigger: AGGCCTGTTATGGAATCCTCAAGGTACCAGAGGGCA...TTGCGATAAGCTCTTACTATTGACCAAGGTTATACAGGAAAGAGACTGAAGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR TCA 90 bp TCTAGTCTTAGCAGTGTCTTATGGTTACAATCTACTCTTCTGTTTCCTCAACAAGGGTCACCATGTAAGTaGGGTTCCGAACCCTCTCCA +
Preference number: 4 (lower is better)
Translates to: SSLSSVLWLQSTLLFPQQGSPCK*GSEPSP
Trigger: TGGAGAGGGTTCGGAACCTCACTTACATGGTGACCC...TTGTTGAGGAAACAGAAGAGTAGATTGTAACCATAAGACACTGCTAAGACTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR TCA 90 bp AGTCACCAGAGTCTGGAAGTTCTTCGCTTGAACTTGAGTAGCCACTGTACTATTGGCTTTTTCAGCGAATaGACCAAGGAAGTACCCATT +
Preference number: 4 (lower is better)
Translates to: SHQSLEVLRLNLSSHCTIGFFSE*TKEVPI
Trigger: AATGGGTACTTCCTTGGTTCATTCGCTGAAAAAGCC...AATAGTACAGTGGCTACTCAAGTTCAAGCGAAGAACTTCCAGACTCTGGTGACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR TCA 90 bp TGTACTATTGGAAGCCAGATGGCCAGGTATTGGCAATGGCCAGGGAAATCCCAAGGCTATAAAAATTCATaGGGCTTATTTAAGCCTTGC +
Preference number: 4 (lower is better)
Translates to: CTIGSQMARYWQWPGKSQGYKNS*GLFKPC
Trigger: GCAAGGCTTAAATAAGCCTCATGAATTTTTATAGCC...TTGGGATTTCCCTGGCCATTGCCAATACCTGGCCATCTGGCTTCCAATAGTACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR TCA 90 bp CAGTGGTTAGGGAAGAAGAAGGTCAAGTGGACTGGTAAAAATTCTACTTCAACTTCTGCAGCAACAAGCTaGTCTGGACAGCAGTCTTTC +
Preference number: 4 (lower is better)
Translates to: QWLGKKKVKWTGKNSTSTSAATS*SGQQSF
Trigger: GAAAGACTGCTGTCCAGATCAGCTTGTTGCTGCAGA...AGTTGAAGTAGAATTTTTACCAGTCCACTTGACCTTCTTCTTCCCTAACCACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR TCA 90 bp ATAGCTCATGCACCCCAATTACAGCAGGTGTCGGGCTGGCATAAAGGCTTCTTATGCACATATGTACAATaGGTTTACCAGCCCATAAAT +
Preference number: 4 (lower is better)
Translates to: IAHAPQLQQVSGWHKGFLCTYVQ*VYQPIN
Trigger: ATTTATGGGCTGGTAAACTCATTGTACATATGTGCA...TAAGAAGCCTTTATGCCAGCCCGACACCTGCTGTAATTGGGGTGCATGAGCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR GCA 90 bp TTCTCATCTCTAACAAAAATGCCACACATACATGTAGTTGTGAGAGGCAAAGTCCAGGAGCTTCTCCTATaGTGGGATCGGGAATTCTGG +
Preference number: 4 (lower is better)
Translates to: FSSLTKMPHIHVVVRGKVQELLL*WDREFW
Trigger: CCAGAATTCCCGATCCCAGCATAGGAGAAGCTCCTG...GACTTTGCCTCTCACAACTACATGTATGTGTGGCATTTTTGTTAGAGATGAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR GCA 90 bp CAGTGGTTAGGGAAGAAGAAGGTCAAGTGGACTGGTAAAAATTCTACTTCAACTAGAACACCATCTCATTaGCGTCCTCACCATCAGGAG +
Preference number: 4 (lower is better)
Translates to: QWLGKKKVKWTGKNSTSTRTPSH*RPHHQE
Trigger: CTCCTGATGGTGAGGACGGCAATGAGATGGTGTTCT...AGTTGAAGTAGAATTTTTACCAGTCCACTTGACCTTCTTCTTCCCTAACCACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp ACACTTCAGTCTCTTTCCTGTATAACCTTGGTCAATAGTAAGAGCTTATCGCAATCACATGGAAGGCTGTaGGGCAGTTCTTCACAGAGC +
Preference number: 4 (lower is better)
Translates to: TLQSLSCITLVNSKSLSQSHGRL*GSSSQS
Trigger: GCTCTGTGAAGAACTGCCGCACAGCCTTCCATGTGA...TTGCGATAAGCTCTTACTATTGACCAAGGTTATACAGGAAAGAGACTGAAGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp CAGTGGTTAGGGAAGAAGAAGGTCAAGTGGACTGGTAAAAATTCTACTTCAACTAACTCATCCTCCAACTaGTGCAGCTTCTGCTTACGG +
Preference number: 4 (lower is better)
Translates to: QWLGKKKVKWTGKNSTSTNSSSN*CSFCLR
Trigger: CCGTAAGCAGAAGCTGCAGCAGTTGGAGGATGAGTT...AGTTGAAGTAGAATTTTTACCAGTCCACTTGACCTTCTTCTTCCCTAACCACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp ATAGTGCAAATGAATCTGATACCTCTTAAAATGGTGAGAGGTCATACACTTACTCTTCAGACACAACCCTaGCCACAGGCTGAGGGATGG +
Preference number: 4 (lower is better)
Translates to: IVQMNLIPLKMVRGHTLTLQTQP*PQAEGW
Trigger: CCATCCCTCAGCCTGTGGCCAGGGTTGTGTCTGAAG...AGTAAGTGTATGACCTCTCACCATTTTAAGAGGTATCAGATTCATTTGCACTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226319.11
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp TTCAGTTCGGGTTCTAGTCTTAGCAGTGTCTTATGGTTACAATCTACTCTTCTGTCAAGTCCTCTATCTTaGGAGCATCAGGGCCAACAG +
Preference number: 4 (lower is better)
Translates to: FSSGSSLSSVLWLQSTLLSSPLS*EHQGQQ
Trigger: CTGTTGGCCCTGATGCTCCCAAGATAGAGGACTTGA...CAGAAGAGTAGATTGTAACCATAAGACACTGCTAAGACTAGAACCCGAACTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp CAGTGGTTAGGGAAGAAGAAGGTCAAGTGGACTGGTAAAAATTCTACTTCAACTTCTACCACACAGGTCTaGCTGCTTCAGCAGGGTTTT +
Preference number: 4 (lower is better)
Translates to: QWLGKKKVKWTGKNSTSTSTTQV*LLQQGF
Trigger: AAAACCCTGCTGAAGCAGCCAGACCTGTGTGGTAGA...AGTTGAAGTAGAATTTTTACCAGTCCACTTGACCTTCTTCTTCCCTAACCACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp TCTAGTCTTAGCAGTGTCTTATGGTTACAATCTACTCTTCTGTTTCCTCAACAACCGTTCCCCCTTCTTTaGAATCCGGAATCCTCCCCA +
Preference number: 4 (lower is better)
Translates to: SSLSSVLWLQSTLLFPQQPFPLL*NPESSP
Trigger: TGGGGAGGATTCCGGATTCCAAAGAAGGGGGAACGG...TTGTTGAGGAAACAGAAGAGTAGATTGTAACCATAAGACACTGCTAAGACTAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp CAGTGGTTAGGGAAGAAGAAGGTCAAGTGGACTGGTAAAAATTCTACTTCAACTTTTTTGCCCTTTCCTTaGCTGGAACTCGGCCTAAGC +
Preference number: 4 (lower is better)
Translates to: QWLGKKKVKWTGKNSTSTFLPFP*LELGLS
Trigger: GCTTAGGCCGAGTTCCAGCCAAGGAAAGGGCAAAAA...AGTTGAAGTAGAATTTTTACCAGTCCACTTGACCTTCTTCTTCCCTAACCACTG
44% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp TCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTCTGTTAAGAAGAAGGTCAAGTaGACTGGTAAAAATTCTACT +
Preference number: 4 (lower is better)
Translates to: SPLANPMTSPKGFRIISVKKKVK*TGKNST
Trigger: AGTAGAATTTTTACCAGTCCACTTGACCTTCTTCTT...AACAGAGATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp CAGTGGTTAGGGAAGAAGAAGGTCAAGTGGACTGGTAAAAATTCTACTTCAACTTGGCTCAAGAGCCAGTaGTTAGGGAAGAAGAAGGTC +
Preference number: 4 (lower is better)
Translates to: QWLGKKKVKWTGKNSTSTWLKSQ*LGKKKV
Trigger: GACCTTCTTCTTCCCTAACCACTGGCTCTTGAGCCA...AGTTGAAGTAGAATTTTTACCAGTCCACTTGACCTTCTTCTTCCCTAACCACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp CAGTGGTTAGGGAAGAAGAAGGTCAAGTGGACTGGTAAAAATTCTACTTCAACTAGGGAAATCCCAAGCTaGCTCAAGAGCCAGTGGTTA +
Preference number: 4 (lower is better)
Translates to: QWLGKKKVKWTGKNSTSTREIPS*LKSQWL
Trigger: TAACCACTGGCTCTTGAGCCAGCTTGGGATTTCCCT...AGTTGAAGTAGAATTTTTACCAGTCCACTTGACCTTCTTCTTCCCTAACCACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp ACACTTCAGTCTCTTTCCTGTATAACCTTGGTCAATAGTAAGAGCTTATCGCAAGCCAGGTATTGGCAATaGCCAGGGAAATCCCAAGCT +
Preference number: 4 (lower is better)
Translates to: TLQSLSCITLVNSKSLSQARYWQ*PGKSQA
Trigger: AGCTTGGGATTTCCCTGGCCATTGCCAATACCTGGC...TTGCGATAAGCTCTTACTATTGACCAAGGTTATACAGGAAAGAGACTGAAGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp AATCCCAAGCTGGCTCAAGAGCCAGTGGTTAGGGAAGAAGAAGGTCAAGTGGACACTTGCATAGCAAGATaGGATTCAATAAGCCTTTTT +
Preference number: 4 (lower is better)
Translates to: NPKLAQEPVVREEEGQVDTCIAR*DSISLF
Trigger: AAAAAGGCTTATTGAATCCCATCTTGCTATGCAAGT...GTCCACTTGACCTTCTTCTTCCCTAACCACTGGCTCTTGAGCCAGCTTGGGATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
3UTR CAA 72 bp GTAAACCATCCTGAGTCAACTCCTTGGGTCATTTTCTaGGGGCTCATTCACTCTAGCTCTAGAATGAAGGAA +
Preference number: 4 (lower is better)
Translates to: VNHPESTPWVIF*GLIHSSSRMKE
Trigger: TTCCTTCATTCTAGAGCTAGAGTGAATGAGCCCCAAGAAAATGACCCAAGGAGTTGACTCAGGATGGTTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
3UTR CAA 72 bp GATTGTGAGACAAACACAGTCCAAACAATAGACTTCTaGTCCTCCCCCTCCCAACAACTATCTGACTCCATA +
Preference number: 4 (lower is better)
Translates to: DCETNTVQTIDF*SSPSQQLSDSI
Trigger: TATGGAGTCAGATAGTTGTTGGGAGGGGGAGGACAAGAAGTCTATTGTTTGGACTGTGTTTGTCTCACAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
3UTR CAA 72 bp TCTAGTTCAGGCATTCCCATCTCCTTAAATTCTTCATaGGTCAGTTCCAGCCATGCAGCATCCATGTCATTG +
Preference number: 4 (lower is better)
Translates to: SSSGIPISLNSS*VSSSHAASMSL
Trigger: CAATGACATGGATGCTGCATGGCTGGAACTGACCAATGAAGAATTTAAGGAGATGGGAATGCCTGAACTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511925.5
CDS-3UTR TCA 90 bp TTCCTAATAGTGCAAATGAATCTGATACCTCTTAAAATGGTGAGAGGTCATACACTGGGACCAAGTAGTTaGCAGGCTGCCATTGTCGTC +
Preference number: 4 (lower is better)
Translates to: FLIVQMNLIPLKMVRGHTLGPSS*QAAIVV
Trigger: GACGACAATGGCAGCCTGTCAACTACTTGGTCCCAG...TGTATGACCTCTCACCATTTTAAGAGGTATCAGATTCATTTGCACTATTAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR TCA 90 bp TTCAGTTCGGGTTCTAGTCTTAGCAGTGTCTTATGGTTACAATCTACTCTTCTGTCTGTTGTGCTGATATaGGACGTGCTTCTGCAAAGG +
Preference number: 4 (lower is better)
Translates to: FSSGSSLSSVLWLQSTLLSVVLI*DVLLQR
Trigger: CCTTTGCAGAAGCACGTCTCATATCAGCACAACAGA...CAGAAGAGTAGATTGTAACCATAAGACACTGCTAAGACTAGAACCCGAACTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR TCA 90 bp CCAACAGCCACGACATTCAGCAATCTCAGTGTGACAAACAACACATCTGTAGCGTGCACATATGTACAATaGGTTTACCAGCCCATAAAT +
Preference number: 4 (lower is better)
Translates to: PTATTFSNLSVTNNTSVACTYVQ*VYQPIN
Trigger: ATTTATGGGCTGGTAAACTCATTGTACATATGTGCA...CGCTACAGATGTGTTGTTTGTCACACTGAGATTGCTGAATGTCGTGGCTGTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR TCA 90 bp GCCAACAGCCACGACATTCAGCAATCTCAGTGTGACAAACAACACATCTGTAGCAAGACACACCCCATTTaGTCTTACAAAACAGTAAAG +
Preference number: 4 (lower is better)
Translates to: ANSHDIQQSQCDKQHICSKTHPI*SYKTVK
Trigger: CTTTACTGTTTTGTAAGATCAAATGGGGTGTGTCTT...GCTACAGATGTGTTGTTTGTCACACTGAGATTGCTGAATGTCGTGGCTGTTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR TCA 90 bp TTCTCATCTCTAACAAAAATGCCACACATACATGTAGTTGTGAGAGGCAAAGTCCTCCCAACAACTATCTaGCTCCATAGCTCATGCACC +
Preference number: 4 (lower is better)
Translates to: FSSLTKMPHIHVVVRGKVLPTTI*LHSSCT
Trigger: GGTGCATGAGCTATGGAGTCAGATAGTTGTTGGGAG...GACTTTGCCTCTCACAACTACATGTATGTGTGGCATTTTTGTTAGAGATGAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR GCA 90 bp ATAGTGCAAATGAATCTGATACCTCTTAAAATGGTGAGAGGTCATACACTTACTCAGAATCCTCACTGCTaGTGGGAAGGCGACCTCGTT +
Preference number: 4 (lower is better)
Translates to: IVQMNLIPLKMVRGHTLTQNPHC*WEGDLV
Trigger: AACGAGGTCGCCTTCCCAGCAGCAGTGAGGATTCTG...AGTAAGTGTATGACCTCTCACCATTTTAAGAGGTATCAGATTCATTTGCACTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp ATTTTTAACCAACACAACCTCATGCTGTGGTGTGTACAAGGGTCTGAGAGTATACTGTCTCCAGGGATCTaGCAACACATAGTACTCATC +
Preference number: 4 (lower is better)
Translates to: IFNQHNLMLWCVQGSESILSPGI*QHIVLI
Trigger: GATGAGTACTATGTGTTGGCAGATCCCTGGAGACAG...TATACTCTCAGACCCTTGTACACACCACAGCATGAGGTTGTGTTGGTTAAAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR GCA 90 bp ACACTTCAGTCTCTTTCCTGTATAACCTTGGTCAATAGTAAGAGCTTATCGCAAGGTCAGTTCCAGCCATaGAGCATCCATGTCATTGAG +
Preference number: 4 (lower is better)
Translates to: TLQSLSCITLVNSKSLSQGQFQP*SIHVIE
Trigger: CTCAATGACATGGATGCTGCATGGCTGGAACTGACC...TTGCGATAAGCTCTTACTATTGACCAAGGTTATACAGGAAAGAGACTGAAGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp TTCTCATCTCTAACAAAAATGCCACACATACATGTAGTTGTGAGAGGCAAAGTCGGTCAGTTCCAGCCATaGAGCATCCATGTCATTGAG +
Preference number: 4 (lower is better)
Translates to: FSSLTKMPHIHVVVRGKVGQFQP*SIHVIE
Trigger: CTCAATGACATGGATGCTGCATGGCTGGAACTGACC...GACTTTGCCTCTCACAACTACATGTATGTGTGGCATTTTTGTTAGAGATGAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR GCA 90 bp ATAGTGCAAATGAATCTGATACCTCTTAAAATGGTGAGAGGTCATACACTTACTTCTCTGGGCTGCCAATaGTCACCTCAGGGATCCACA +
Preference number: 4 (lower is better)
Translates to: IVQMNLIPLKMVRGHTLTSLGCQ*SPQGST
Trigger: TGTGGATCCCTGAGGTGAGCATTGGCAGCCCAGAGA...AGTAAGTGTATGACCTCTCACCATTTTAAGAGGTATCAGATTCATTTGCACTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp TCTAGTCTTAGCAGTGTCTTATGGTTACAATCTACTCTTCTGTTTCCTCAACAATCACATGGAAGGCTGTaGGGCAGTTCTTCACAGAGC +
Preference number: 4 (lower is better)
Translates to: SSLSSVLWLQSTLLFPQQSHGRL*GSSSQS
Trigger: GCTCTGTGAAGAACTGCCGCACAGCCTTCCATGTGA...TTGTTGAGGAAACAGAAGAGTAGATTGTAACCATAAGACACTGCTAAGACTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp ATAGTGCAAATGAATCTGATACCTCTTAAAATGGTGAGAGGTCATACACTTACTAACTGCTGCAGCTTCTaGTTACGGACACTCACCCGG +
Preference number: 4 (lower is better)
Translates to: IVQMNLIPLKMVRGHTLTNCCSF*LRTLTR
Trigger: CCGGGTGAGTGTCCGTAAGCAGAAGCTGCAGCAGTT...AGTAAGTGTATGACCTCTCACCATTTTAAGAGGTATCAGATTCATTTGCACTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp TTCAGTTCGGGTTCTAGTCTTAGCAGTGTCTTATGGTTACAATCTACTCTTCTGAGGTGCGTGAACAGCTaGAGCCTCCTAAATAAGACA +
Preference number: 4 (lower is better)
Translates to: FSSGSSLSSVLWLQSTLLRCVNS*SLLNKT
Trigger: TGTCTTATTTAGGAGGCTGCAGCTGTTCACGCACCT...CAGAAGAGTAGATTGTAACCATAAGACACTGCTAAGACTAGAACCCGAACTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp TTCAGTTCGGGTTCTAGTCTTAGCAGTGTCTTATGGTTACAATCTACTCTTCTGCTTCCAGGGCTATTCTaGAAAGGATCTCGCTTATGG +
Preference number: 4 (lower is better)
Translates to: FSSGSSLSSVLWLQSTLLLPGLF*KGSRLW
Trigger: CCATAAGCGAGATCCTTTGCAGAATAGCCCTGGAAG...CAGAAGAGTAGATTGTAACCATAAGACACTGCTAAGACTAGAACCCGAACTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp CAGTGGTTAGGGAAGAAGAAGGTCAAGTGGACTGGTAAAAATTCTACTTCAACTCTTCCAGGGCTATTCTaGAAAGGATCTCGCTTATGG +
Preference number: 4 (lower is better)
Translates to: QWLGKKKVKWTGKNSTSTLPGLF*KGSRLW
Trigger: CCATAAGCGAGATCCTTTGCAGAATAGCCCTGGAAG...AGTTGAAGTAGAATTTTTACCAGTCCACTTGACCTTCTTCTTCCCTAACCACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp ACACTTCAGTCTCTTTCCTGTATAACCTTGGTCAATAGTAAGAGCTTATCGCAAGCTTCAGCAGGGTTTTaGCTTCACTTCCAGGGCTAT +
Preference number: 4 (lower is better)
Translates to: TLQSLSCITLVNSKSLSQASAGF*LHFQGY
Trigger: ATAGCCCTGGAAGTGAAGGCAAAACCCTGCTGAAGC...TTGCGATAAGCTCTTACTATTGACCAAGGTTATACAGGAAAGAGACTGAAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp CAGTGGTTAGGGAAGAAGAAGGTCAAGTGGACTGGTAAAAATTCTACTTCAACTCCTAAATCTCCATATTaGAGCAGCTCTACCCTGTCC +
Preference number: 4 (lower is better)
Translates to: QWLGKKKVKWTGKNSTSTPKSPY*SSSTLS
Trigger: GGACAGGGTAGAGCTGCTGCAATATGGAGATTTAGG...AGTTGAAGTAGAATTTTTACCAGTCCACTTGACCTTCTTCTTCCCTAACCACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp ATTTTTAACCAACACAACCTCATGCTGTGGTGTGTACAAGGGTCTGAGAGTATAACCAACACAACCTCATaGTGTGGTGTGTACAAGGGT +
Preference number: 4 (lower is better)
Translates to: IFNQHNLMLWCVQGSESITNTTS*CGVYKG
Trigger: ACCCTTGTACACACCACAGCATGAGGTTGTGTTGGT...TATACTCTCAGACCCTTGTACACACCACAGCATGAGGTTGTGTTGGTTAAAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR GCA 90 bp GCAGCCAACAGCCACGACATTCAGCAATCTCAGTGTGACAAACAACACATCTGTATAATTACAAATAACTaGAACTCTCTGGGCAAGGCA +
Preference number: 4 (lower is better)
Translates to: AANSHDIQQSQCDKQHICIITNN*NSLGKA
Trigger: TGCCTTGCCCAGAGAGTTGCAGTTATTTGTAATTAT...ACAGATGTGTTGTTTGTCACACTGAGATTGCTGAATGTCGTGGCTGTTGGCTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413543.6
CDS-3UTR CCA 90 bp TCTAGTCTTAGCAGTGTCTTATGGTTACAATCTACTCTTCTGTTTCCTCAACAAGAGCTTCTCCTATGCTaGGATCGGGAATTCTGGGAC +
Preference number: 4 (lower is better)
Translates to: SSLSSVLWLQSTLLFPQQELLLC*DREFWD
Trigger: GTCCCAGAATTCCCGATCCCAGCATAGGAGAAGCTC...TTGTTGAGGAAACAGAAGAGTAGATTGTAACCATAAGACACTGCTAAGACTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp CATCTCCTTAAATTCTTCATTGGTCAGTTCCAGCCATGCAGCATCCATGTCATTTTCGATCTTCATGTCTaGAGCAGGAGCTTCTCCTAT +
Preference number: 4 (lower is better)
Translates to: HLLKFFIGQFQPCSIHVIFDLHV*SRSFSY
Trigger: ATAGGAGAAGCTCCTGCTCCAGACATGAAGATCGAA...AATGACATGGATGCTGCATGGCTGGAACTGACCAATGAAGAATTTAAGGAGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511925.5
CDS-3UTR CCA 90 bp ACACTTCAGTCTCTTTCCTGTATAACCTTGGTCAATAGTAAGAGCTTATCGCAACATCCTGCTCCCGCTTaGCTAGATTGTCCTCTTCAT +
Preference number: 4 (lower is better)
Translates to: TLQSLSCITLVNSKSLSQHPAPA*LDCPLH
Trigger: ATGAAGAGGACAATCTAGCCAAGCGGGAGCAGGATG...TTGCGATAAGCTCTTACTATTGACCAAGGTTATACAGGAAAGAGACTGAAGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp ATAGTGCAAATGAATCTGATACCTCTTAAAATGGTGAGAGGTCATACACTTACTACCCAAAAAGCTCTCTaGGACCACCATCCCCTCCCT +
Preference number: 4 (lower is better)
Translates to: IVQMNLIPLKMVRGHTLTTQKAL*DHHPLP
Trigger: AGGGAGGGGATGGTGGTCCCAGAGAGCTTTTTGGGT...AGTAAGTGTATGACCTCTCACCATTTTAAGAGGTATCAGATTCATTTGCACTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp ACACTTCAGTCTCTTTCCTGTATAACCTTGGTCAATAGTAAGAGCTTATCGCAATGGCTCAAGAGCCAGTaGTTAGGGAAGAAGAAGGTC +
Preference number: 4 (lower is better)
Translates to: TLQSLSCITLVNSKSLSQWLKSQ*LGKKKV
Trigger: GACCTTCTTCTTCCCTAACCACTGGCTCTTGAGCCA...TTGCGATAAGCTCTTACTATTGACCAAGGTTATACAGGAAAGAGACTGAAGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp TCTAGTCTTAGCAGTGTCTTATGGTTACAATCTACTCTTCTGTTTCCTCAACAAGCCAGGTATTGGCAATaGCCAGGGAAATCCCAAGCT +
Preference number: 4 (lower is better)
Translates to: SSLSSVLWLQSTLLFPQQARYWQ*PGKSQA
Trigger: AGCTTGGGATTTCCCTGGCCATTGCCAATACCTGGC...TTGTTGAGGAAACAGAAGAGTAGATTGTAACCATAAGACACTGCTAAGACTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp GAGACAAACACAGTCCAAACAATAGACTTCTTGTCCTCCCCCTCCCAACAACTACTGAGAGTATATGACTaGCTATCATTTCTTGCTCTG +
Preference number: 4 (lower is better)
Translates to: ETNTVQTIDFLSSPSQQLLRVYD*LSFLAL
Trigger: CAGAGCAAGAAATGATAGCCAGTCATATACTCTCAG...TAGTTGTTGGGAGGGGGAGGACAAGAAGTCTATTGTTTGGACTGTGTTTGTCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR CCA 90 bp ATAGTGCAAATGAATCTGATACCTCTTAAAATGGTGAGAGGTCATACACTTACTACACGATGTACTTCTTaGGCCTGGCCACAGGCTGAG +
Preference number: 4 (lower is better)
Translates to: IVQMNLIPLKMVRGHTLTTRCTS*AWPQAE
Trigger: CTCAGCCTGTGGCCAGGCCCAAGAAGTACATCGTGT...AGTAAGTGTATGACCTCTCACCATTTTAAGAGGTATCAGATTCATTTGCACTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452328.6
CDS-3UTR TCA 90 bp TTCCTAATAGTGCAAATGAATCTGATACCTCTTAAAATGGTGAGAGGTCATACATGCCCTCTGGTACCTTaGGGATTCCATAACAGGCCT +
Preference number: 4 (lower is better)
Translates to: FLIVQMNLIPLKMVRGHTCPLVP*GFHNRP
Trigger: AGGCCTGTTATGGAATCCTCAAGGTACCAGAGGGCA...TGTATGACCTCTCACCATTTTAAGAGGTATCAGATTCATTTGCACTATTAGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR TCA 90 bp ACACTTCAGTCTCTTTCCTGTATAACCTTGGTCAATAGTAAGAGCTTATCGCAACAACATCCAGCAGGTTaGCGAAGGTGTAGAACTCAT +
Preference number: 4 (lower is better)
Translates to: TLQSLSCITLVNSKSLSQQHPAG*RRCRTH
Trigger: ATGAGTTCTACACCTTCGTCAACCTGCTGGATGTTG...TTGCGATAAGCTCTTACTATTGACCAAGGTTATACAGGAAAGAGACTGAAGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR TCA 90 bp TCTAGTCTTAGCAGTGTCTTATGGTTACAATCTACTCTTCTGTTTCCTCAACAAAAGCATGTTTTCCAGTaGGGAGGAGGAGCAGGAAGA +
Preference number: 4 (lower is better)
Translates to: SSLSSVLWLQSTLLFPQQKHVFQ*GGGAGR
Trigger: TCTTCCTGCTCCTCCTCCTCACTGGAAAACATGCTT...TTGTTGAGGAAACAGAAGAGTAGATTGTAACCATAAGACACTGCTAAGACTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR TCA 90 bp TTCAGTTCGGGTTCTAGTCTTAGCAGTGTCTTATGGTTACAATCTACTCTTCTGGGCTTTTTCAGCGAATaGACCAAGGAAGTACCCATT +
Preference number: 4 (lower is better)
Translates to: FSSGSSLSSVLWLQSTLLGFFSE*TKEVPI
Trigger: AATGGGTACTTCCTTGGTTCATTCGCTGAAAAAGCC...CAGAAGAGTAGATTGTAACCATAAGACACTGCTAAGACTAGAACCCGAACTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp TTCCTAATAGTGCAAATGAATCTGATACCTCTTAAAATGGTGAGAGGTCATACACAGGAGCTTCTCCTATaGTGGGATCGGGAATTCTGG +
Preference number: 4 (lower is better)
Translates to: FLIVQMNLIPLKMVRGHTQELLL*WDREFW
Trigger: CCAGAATTCCCGATCCCAGCATAGGAGAAGCTCCTG...TGTATGACCTCTCACCATTTTAAGAGGTATCAGATTCATTTGCACTATTAGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp TCTAGTCTTAGCAGTGTCTTATGGTTACAATCTACTCTTCTGTTTCCTCAACAAAGAACACCATCTCATTaGCGTCCTCACCATCAGGAG +
Preference number: 4 (lower is better)
Translates to: SSLSSVLWLQSTLLFPQQRTPSH*RPHHQE
Trigger: CTCCTGATGGTGAGGACGGCAATGAGATGGTGTTCT...TTGTTGAGGAAACAGAAGAGTAGATTGTAACCATAAGACACTGCTAAGACTAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp ATAGTGCAAATGAATCTGATACCTCTTAAAATGGTGAGAGGTCATACACTTACTTCACATGGAAGGCTGTaGGGCAGTTCTTCACAGAGC +
Preference number: 4 (lower is better)
Translates to: IVQMNLIPLKMVRGHTLTSHGRL*GSSSQS
Trigger: GCTCTGTGAAGAACTGCCGCACAGCCTTCCATGTGA...AGTAAGTGTATGACCTCTCACCATTTTAAGAGGTATCAGATTCATTTGCACTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp ACACTTCAGTCTCTTTCCTGTATAACCTTGGTCAATAGTAAGAGCTTATCGCAAGGATTAATGGGTTTCTaGTTCTCCCCCACATCAGAG +
Preference number: 4 (lower is better)
Translates to: TLQSLSCITLVNSKSLSQGLMGF*FSPTSE
Trigger: CTCTGATGTGGGGGAGAAGCAGAAACCCATTAATCC...TTGCGATAAGCTCTTACTATTGACCAAGGTTATACAGGAAAGAGACTGAAGTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp TTCAGTTCGGGTTCTAGTCTTAGCAGTGTCTTATGGTTACAATCTACTCTTCTGCAAGCAGCAGGACCTTaGCATATTACCCTAAATCTC +
Preference number: 4 (lower is better)
Translates to: FSSGSSLSSVLWLQSTLLQAAGP*HITLNL
Trigger: GAGATTTAGGGTAATATGGCAAGGTCCTGCTGCTTG...CAGAAGAGTAGATTGTAACCATAAGACACTGCTAAGACTAGAACCCGAACTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp CAGTGGTTAGGGAAGAAGAAGGTCAAGTGGACTGGTAAAAATTCTACTTCAACTAGATTCCCTAACATATaGACTAGTGGTTGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: QWLGKKKVKWTGKNSTSTRFPNI*TSGWLW
Trigger: CCAGAGCCAACCACTAGTGCATATGTTAGGGAATCT...AGTTGAAGTAGAATTTTTACCAGTCCACTTGACCTTCTTCTTCCCTAACCACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp TCTAGTCTTAGCAGTGTCTTATGGTTACAATCTACTCTTCTGTTTCCTCAACAATGGGATCGGGAATTCTaGGACCAAGTAGTTGACAGG +
Preference number: 4 (lower is better)
Translates to: SSLSSVLWLQSTLLFPQQWDREF*DQVVDR
Trigger: CCTGTCAACTACTTGGTCCCAGAATTCCCGATCCCA...TTGTTGAGGAAACAGAAGAGTAGATTGTAACCATAAGACACTGCTAAGACTAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp ATAGTGCAAATGAATCTGATACCTCTTAAAATGGTGAGAGGTCATACACTTACTAGAGCACAGCTAACGTaGACCCACTTGGTTCCGCTA +
Preference number: 4 (lower is better)
Translates to: IVQMNLIPLKMVRGHTLTRAQLT*THLVPL
Trigger: TAGCGGAACCAAGTGGGTCCACGTTAGCTGTGCTCT...AGTAAGTGTATGACCTCTCACCATTTTAAGAGGTATCAGATTCATTTGCACTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp AGTCACCAGAGTCTGGAAGTTCTTCGCTTGAACTTGAGTAGCCACTGTACTATTTTCAACTTCCAGTACTaGTACAGGAAATCCACTACT +
Preference number: 4 (lower is better)
Translates to: SHQSLEVLRLNLSSHCTIFNFQY*YRKSTT
Trigger: AGTAGTGGATTTCCTGTACCAGTACTGGAAGTTGAA...AATAGTACAGTGGCTACTCAAGTTCAAGCGAAGAACTTCCAGACTCTGGTGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp TTCAGTTCGGGTTCTAGTCTTAGCAGTGTCTTATGGTTACAATCTACTCTTCTGCTCTTCATCTTTCTTTaGGGTGATCAGGGGCTTGTT +
Preference number: 4 (lower is better)
Translates to: FSSGSSLSSVLWLQSTLLLFIFL*GDQGLV
Trigger: AACAAGCCCCTGATCACCCCAAAGAAAGATGAAGAG...CAGAAGAGTAGATTGTAACCATAAGACACTGCTAAGACTAGAACCCGAACTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp TTCCTAATAGTGCAAATGAATCTGATACCTCTTAAAATGGTGAGAGGTCATACATTGTCCAGATGCCTCTaGGACACATCTGTGGACCTG +
Preference number: 4 (lower is better)
Translates to: FLIVQMNLIPLKMVRGHTLSRCL*DTSVDL
Trigger: CAGGTCCACAGATGTGTCCCAGAGGCATCTGGACAA...TGTATGACCTCTCACCATTTTAAGAGGTATCAGATTCATTTGCACTATTAGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp ATAGTGCAAATGAATCTGATACCTCTTAAAATGGTGAGAGGTCATACACTTACTGGGAGCCATTGCACTTaGGCACTATCTCCTTCCTTG +
Preference number: 4 (lower is better)
Translates to: IVQMNLIPLKMVRGHTLTGSHCT*ALSPSL
Trigger: CAAGGAAGGAGATAGTGCCCAAGTGCAATGGCTCCC...AGTAAGTGTATGACCTCTCACCATTTTAAGAGGTATCAGATTCATTTGCACTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp TTCAGTTCGGGTTCTAGTCTTAGCAGTGTCTTATGGTTACAATCTACTCTTCTGGGAATCCATTCATGTTaGAAGCCCAGATTCCCTAAC +
Preference number: 4 (lower is better)
Translates to: FSSGSSLSSVLWLQSTLLGIHSC*KPRFPN
Trigger: GTTAGGGAATCTGGGCTTCCAACATGAATGGATTCC...CAGAAGAGTAGATTGTAACCATAAGACACTGCTAAGACTAGAACCCGAACTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR TCA 90 bp TCTAGTCTTAGCAGTGTCTTATGGTTACAATCTACTCTTCTGTTTCCTCAACAAGGAAGAAGGCACACCTaGAACTCTTTCTTGCTCCAA +
Preference number: 4 (lower is better)
Translates to: SSLSSVLWLQSTLLFPQQGRRHT*NSFLLQ
Trigger: TTGGAGCAAGAAAGAGTTTCAGGTGTGCCTTCTTCC...TTGTTGAGGAAACAGAAGAGTAGATTGTAACCATAAGACACTGCTAAGACTAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR TCA 90 bp TTCAGTTCGGGTTCTAGTCTTAGCAGTGTCTTATGGTTACAATCTACTCTTCTGGACCTGAGAGGCTTGTaGCTCTGTTTAAAAGATTTG +
Preference number: 4 (lower is better)
Translates to: FSSGSSLSSVLWLQSTLLDLRGL*LCLKDL
Trigger: CAAATCTTTTAAACAGAGTCACAAGCCTCTCAGGTC...CAGAAGAGTAGATTGTAACCATAAGACACTGCTAAGACTAGAACCCGAACTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR TCA 90 bp TTCTCATCTCTAACAAAAATGCCACACATACATGTAGTTGTGAGAGGCAAAGTCTGTGTTTCCCCGGACTaGACAAGAAATTTTCCCATC +
Preference number: 4 (lower is better)
Translates to: FSSLTKMPHIHVVVRGKVCVSPD*TRNFPI
Trigger: GATGGGAAAATTTCTTGTTCAGTCCGGGGAAACACA...GACTTTGCCTCTCACAACTACATGTATGTGTGGCATTTTTGTTAGAGATGAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR GCA 90 bp TCTAGTCTTAGCAGTGTCTTATGGTTACAATCTACTCTTCTGTTTCCTCAACAACTGTCTCCAGGGATCTaGCAACACATAGTACTCATC +
Preference number: 4 (lower is better)
Translates to: SSLSSVLWLQSTLLFPQQLSPGI*QHIVLI
Trigger: GATGAGTACTATGTGTTGGCAGATCCCTGGAGACAG...TTGTTGAGGAAACAGAAGAGTAGATTGTAACCATAAGACACTGCTAAGACTAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp TCTAGTCTTAGCAGTGTCTTATGGTTACAATCTACTCTTCTGTTTCCTCAACAAGGATTAATGGGTTTCTaGTTCTCCCCCACATCAGAG +
Preference number: 4 (lower is better)
Translates to: SSLSSVLWLQSTLLFPQQGLMGF*FSPTSE
Trigger: CTCTGATGTGGGGGAGAAGCAGAAACCCATTAATCC...TTGTTGAGGAAACAGAAGAGTAGATTGTAACCATAAGACACTGCTAAGACTAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp TCTAGTCTTAGCAGTGTCTTATGGTTACAATCTACTCTTCTGTTTCCTCAACAATCTCTTCTTTTCCCATaGTCTGGCATCACCACACCA +
Preference number: 4 (lower is better)
Translates to: SSLSSVLWLQSTLLFPQQSLLFP*SGITTP
Trigger: TGGTGTGGTGATGCCAGACCATGGGAAAAGAAGAGA...TTGTTGAGGAAACAGAAGAGTAGATTGTAACCATAAGACACTGCTAAGACTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp ACACTTCAGTCTCTTTCCTGTATAACCTTGGTCAATAGTAAGAGCTTATCGCAACATGAGTTTGTGCTTTaGGAAGAATGCAGAGGGCTA +
Preference number: 4 (lower is better)
Translates to: TLQSLSCITLVNSKSLSQHEFVL*EECRGL
Trigger: TAGCCCTCTGCATTCTTCCCAAAGCACAAACTCATG...TTGCGATAAGCTCTTACTATTGACCAAGGTTATACAGGAAAGAGACTGAAGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR TCA 90 bp TTCCTAATAGTGCAAATGAATCTGATACCTCTTAAAATGGTGAGAGGTCATACAGGAAGAAGGCACACCTaGAACTCTTTCTTGCTCCAA +
Preference number: 4 (lower is better)
Translates to: FLIVQMNLIPLKMVRGHTGRRHT*NSFLLQ
Trigger: TTGGAGCAAGAAAGAGTTTCAGGTGTGCCTTCTTCC...TGTATGACCTCTCACCATTTTAAGAGGTATCAGATTCATTTGCACTATTAGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR TCA 90 bp TTCAGTTCGGGTTCTAGTCTTAGCAGTGTCTTATGGTTACAATCTACTCTTCTGTACCCATTTGTTTTCTaGAGAATGCAGAATGCCACT +
Preference number: 4 (lower is better)
Translates to: FSSGSSLSSVLWLQSTLLYPFVF*RMQNAT
Trigger: AGTGGCATTCTGCATTCTTCAGAAAACAAATGGGTA...CAGAAGAGTAGATTGTAACCATAAGACACTGCTAAGACTAGAACCCGAACTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR TCA 90 bp CAGTGGTTAGGGAAGAAGAAGGTCAAGTGGACTGGTAAAAATTCTACTTCAACTTTTTTCAATTTTAGCTaGATGGACACCAAGCTAGGC +
Preference number: 4 (lower is better)
Translates to: QWLGKKKVKWTGKNSTSTFFNFS*MDTKLG
Trigger: GCCTAGCTTGGTGTCCATTCAGCTAAAATTGAAAAA...AGTTGAAGTAGAATTTTTACCAGTCCACTTGACCTTCTTCTTCCCTAACCACTG
40% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR TCA 90 bp TTCAGTTCGGGTTCTAGTCTTAGCAGTGTCTTATGGTTACAATCTACTCTTCTGTTTTTCAATTTTAGCTaGATGGACACCAAGCTAGGC +
Preference number: 4 (lower is better)
Translates to: FSSGSSLSSVLWLQSTLLFFNFS*MDTKLG
Trigger: GCCTAGCTTGGTGTCCATTCAGCTAAAATTGAAAAA...CAGAAGAGTAGATTGTAACCATAAGACACTGCTAAGACTAGAACCCGAACTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp ACACTTCAGTCTCTTTCCTGTATAACCTTGGTCAATAGTAAGAGCTTATCGCAACTGAAGAATGCAGAATaGCACTTCAAGTCCTCTATC +
Preference number: 4 (lower is better)
Translates to: TLQSLSCITLVNSKSLSQLKNAE*HFKSSI
Trigger: GATAGAGGACTTGAAGTGGCATTCTGCATTCTTCAG...TTGCGATAAGCTCTTACTATTGACCAAGGTTATACAGGAAAGAGACTGAAGTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp TTCAGTTCGGGTTCTAGTCTTAGCAGTGTCTTATGGTTACAATCTACTCTTCTGAAGCTTCAGAGCTGCTaGCTATATGCTATAATGCAA +
Preference number: 4 (lower is better)
Translates to: FSSGSSLSSVLWLQSTLLKLQSC*LYAIMQ
Trigger: TTGCATTATAGCATATAGGCAGCAGCTCTGAAGCTT...CAGAAGAGTAGATTGTAACCATAAGACACTGCTAAGACTAGAACCCGAACTGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp TTCCTAATAGTGCAAATGAATCTGATACCTCTTAAAATGGTGAGAGGTCATACACCTAAATCTCCATATTaGAGCAGCTCTACCCTGTCC +
Preference number: 4 (lower is better)
Translates to: FLIVQMNLIPLKMVRGHTPKSPY*SSSTLS
Trigger: GGACAGGGTAGAGCTGCTGCAATATGGAGATTTAGG...TGTATGACCTCTCACCATTTTAAGAGGTATCAGATTCATTTGCACTATTAGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp CAGTGGTTAGGGAAGAAGAAGGTCAAGTGGACTGGTAAAAATTCTACTTCAACTCTCACCCAGAGCTGTTaGTGTAATCAAAAGATAACT +
Preference number: 4 (lower is better)
Translates to: QWLGKKKVKWTGKNSTSTLTQSC*CNQKIT
Trigger: AGTTATCTTTTGATTACAGCAACAGCTCTGGGTGAG...AGTTGAAGTAGAATTTTTACCAGTCCACTTGACCTTCTTCTTCCCTAACCACTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp TCTAGTCTTAGCAGTGTCTTATGGTTACAATCTACTCTTCTGTTTCCTCAACAACTCTTCATCTTTCTTTaGGGTGATCAGGGGCTTGTT +
Preference number: 4 (lower is better)
Translates to: SSLSSVLWLQSTLLFPQQLFIFL*GDQGLV
Trigger: AACAAGCCCCTGATCACCCCAAAGAAAGATGAAGAG...TTGTTGAGGAAACAGAAGAGTAGATTGTAACCATAAGACACTGCTAAGACTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp TCTAGTCTTAGCAGTGTCTTATGGTTACAATCTACTCTTCTGTTTCCTCAACAACATGAGTTTGTGCTTTaGGAAGAATGCAGAGGGCTA +
Preference number: 4 (lower is better)
Translates to: SSLSSVLWLQSTLLFPQQHEFVL*EECRGL
Trigger: TAGCCCTCTGCATTCTTCCCAAAGCACAAACTCATG...TTGTTGAGGAAACAGAAGAGTAGATTGTAACCATAAGACACTGCTAAGACTAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
3UTR CAA 72 bp CCATATCTGGTTCCCTATATTCAGGTAACCATGAGTTaGTGCTTTGGGAAGAATGCAGAGGGCTATAAAAAT +
Preference number: 4 (lower is better)
Translates to: PYLVPYIQVTMS*CFGKNAEGYKN
Trigger: ATTTTTATAGCCCTCTGCATTCTTCCCAAAGCACAAACTCATGGTTACCTGAATATAGGGAACCAGATATGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
3UTR CAA 72 bp AAAAACCACAAAGAAGCTCCCCACTCAGTAGCAGTTTaGCACATATGTACAATGAGTTTACCAGCCCATAAA +
Preference number: 4 (lower is better)
Translates to: KNHKEAPHSVAV*HICTMSLPAHK
Trigger: TTTATGGGCTGGTAAACTCATTGTACATATGTGCAAAACTGCTACTGAGTGGGGAGCTTCTTTGTGGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
3UTR CAA 72 bp CCTGATTTATTCCCTGTTTCTCATACATCGTTGGCATaGTTCTACTTAAACAGCGACAGTGATGACTCCAAA +
Preference number: 4 (lower is better)
Translates to: PDLFPVSHTSLA*FYLNSDSDDSK
Trigger: TTTGGAGTCATCACTGTCGCTGTTTAAGTAGAACAATGCCAACGATGTATGAGAAACAGGGAATAAATCAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR TCA 90 bp TCTAGTCTTAGCAGTGTCTTATGGTTACAATCTACTCTTCTGTTTCCTCAACAAATTTTTCTGTTGTGCTaGTATGAGACGTGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: SSLSSVLWLQSTLLFPQQIFLLC*YETCFC
Trigger: GCAGAAGCACGTCTCATATCAGCACAACAGAAAAAT...TTGTTGAGGAAACAGAAGAGTAGATTGTAACCATAAGACACTGCTAAGACTAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp TCTAGTCTTAGCAGTGTCTTATGGTTACAATCTACTCTTCTGTTTCCTCAACAACTGAAGAATGCAGAATaGCACTTCAAGTCCTCTATC +
Preference number: 4 (lower is better)
Translates to: SSLSSVLWLQSTLLFPQQLKNAE*HFKSSI
Trigger: GATAGAGGACTTGAAGTGGCATTCTGCATTCTTCAG...TTGTTGAGGAAACAGAAGAGTAGATTGTAACCATAAGACACTGCTAAGACTAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp TTCCTAATAGTGCAAATGAATCTGATACCTCTTAAAATGGTGAGAGGTCATACACAAGCAGCAGGACCTTaGCATATTACCCTAAATCTC +
Preference number: 4 (lower is better)
Translates to: FLIVQMNLIPLKMVRGHTQAAGP*HITLNL
Trigger: GAGATTTAGGGTAATATGGCAAGGTCCTGCTGCTTG...TGTATGACCTCTCACCATTTTAAGAGGTATCAGATTCATTTGCACTATTAGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp ATAGTGCAAATGAATCTGATACCTCTTAAAATGGTGAGAGGTCATACACTTACTAGATTCCCTAACATATaGACTAGTGGTTGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: IVQMNLIPLKMVRGHTLTRFPNI*TSGWLW
Trigger: CCAGAGCCAACCACTAGTGCATATGTTAGGGAATCT...AGTAAGTGTATGACCTCTCACCATTTTAAGAGGTATCAGATTCATTTGCACTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp ACACTTCAGTCTCTTTCCTGTATAACCTTGGTCAATAGTAAGAGCTTATCGCAACTCACCCAGAGCTGTTaGTGTAATCAAAAGATAACT +
Preference number: 4 (lower is better)
Translates to: TLQSLSCITLVNSKSLSQLTQSC*CNQKIT
Trigger: AGTTATCTTTTGATTACAGCAACAGCTCTGGGTGAG...TTGCGATAAGCTCTTACTATTGACCAAGGTTATACAGGAAAGAGACTGAAGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp TTCAGTTCGGGTTCTAGTCTTAGCAGTGTCTTATGGTTACAATCTACTCTTCTGATTTCTTGGTCAGGATaGACAAGGAAAGATAAAGCT +
Preference number: 4 (lower is better)
Translates to: FSSGSSLSSVLWLQSTLLISWSG*TRKDKA
Trigger: AGCTTTATCTTTCCTTGTGCATCCTGACCAAGAAAT...CAGAAGAGTAGATTGTAACCATAAGACACTGCTAAGACTAGAACCCGAACTGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp TTCCTAATAGTGCAAATGAATCTGATACCTCTTAAAATGGTGAGAGGTCATACATTCGATCTTCATGTCTaGAGCAGGAGCTTCTCCTAT +
Preference number: 4 (lower is better)
Translates to: FLIVQMNLIPLKMVRGHTFDLHV*SRSFSY
Trigger: ATAGGAGAAGCTCCTGCTCCAGACATGAAGATCGAA...TGTATGACCTCTCACCATTTTAAGAGGTATCAGATTCATTTGCACTATTAGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp ATAGTGCAAATGAATCTGATACCTCTTAAAATGGTGAGAGGTCATACACTTACTCTAGGACCCTCTCCATaGTGTATTCATCTAGTTCAG +
Preference number: 4 (lower is better)
Translates to: IVQMNLIPLKMVRGHTLTLGPSP*CIHLVQ
Trigger: CTGAACTAGATGAATACACCATGGAGAGGGTCCTAG...AGTAAGTGTATGACCTCTCACCATTTTAAGAGGTATCAGATTCATTTGCACTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp TTCCTAATAGTGCAAATGAATCTGATACCTCTTAAAATGGTGAGAGGTCATACAATATGCACTAGTGGTTaGCTCTGGGAAGTAACAGTC +
Preference number: 4 (lower is better)
Translates to: FLIVQMNLIPLKMVRGHTICTSG*LWEVTV
Trigger: GACTGTTACTTCCCAGAGCCAACCACTAGTGCATAT...TGTATGACCTCTCACCATTTTAAGAGGTATCAGATTCATTTGCACTATTAGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp ATAGTGCAAATGAATCTGATACCTCTTAAAATGGTGAGAGGTCATACACTTACTGGAATCCATTCATGTTaGAAGCCCAGATTCCCTAAC +
Preference number: 4 (lower is better)
Translates to: IVQMNLIPLKMVRGHTLTGIHSC*KPRFPN
Trigger: GTTAGGGAATCTGGGCTTCCAACATGAATGGATTCC...AGTAAGTGTATGACCTCTCACCATTTTAAGAGGTATCAGATTCATTTGCACTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
3UTR CAA 72 bp ACAAATCCTGATTTATTCCCTGTTTCTCATACATCGTaGGCATTGTTCTACTTAAACAGCGACAGTGATGAC +
Preference number: 4 (lower is better)
Translates to: TNPDLFPVSHTS*ALFYLNSDSDD
Trigger: GTCATCACTGTCGCTGTTTAAGTAGAACAATGCCAACGATGTATGAGAAACAGGGAATAAATCAGGATTTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR GCA 90 bp ACACTTCAGTCTCTTTCCTGTATAACCTTGGTCAATAGTAAGAGCTTATCGCAATGTAGGCACTTTGACTaGAGTCTGATTATAGTTTAC +
Preference number: 4 (lower is better)
Translates to: TLQSLSCITLVNSKSLSQCRHFD*SLIIVY
Trigger: GTAAACTATAATCAGACTGCAGTCAAAGTGCCTACA...TTGCGATAAGCTCTTACTATTGACCAAGGTTATACAGGAAAGAGACTGAAGTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp TCTAGTCTTAGCAGTGTCTTATGGTTACAATCTACTCTTCTGTTTCCTCAACAATTCAACTTCCAGTACTaGTACAGGAAATCCACTACT +
Preference number: 4 (lower is better)
Translates to: SSLSSVLWLQSTLLFPQQFNFQY*YRKSTT
Trigger: AGTAGTGGATTTCCTGTACCAGTACTGGAAGTTGAA...TTGTTGAGGAAACAGAAGAGTAGATTGTAACCATAAGACACTGCTAAGACTAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp ATAGTGCAAATGAATCTGATACCTCTTAAAATGGTGAGAGGTCATACACTTACTTTGAATATCTGTTCCTaGACTTTGCACACAGACCGT +
Preference number: 4 (lower is better)
Translates to: IVQMNLIPLKMVRGHTLTLNICS*TLHTDR
Trigger: ACGGTCTGTGTGCAAAGTCCAGGAACAGATATTCAA...AGTAAGTGTATGACCTCTCACCATTTTAAGAGGTATCAGATTCATTTGCACTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp ATAGTGCAAATGAATCTGATACCTCTTAAAATGGTGAGAGGTCATACACTTACTTTTATGGGCTGTGAATaGTACCATGAGGGTTTCTCA +
Preference number: 4 (lower is better)
Translates to: IVQMNLIPLKMVRGHTLTFMGCE*YHEGFS
Trigger: TGAGAAACCCTCATGGTACCATTCACAGCCCATAAA...AGTAAGTGTATGACCTCTCACCATTTTAAGAGGTATCAGATTCATTTGCACTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR TCA 90 bp ATAGTGCAAATGAATCTGATACCTCTTAAAATGGTGAGAGGTCATACACTTACTTACCCATTTGTTTTCTaGAGAATGCAGAATGCCACT +
Preference number: 4 (lower is better)
Translates to: IVQMNLIPLKMVRGHTLTYPFVF*RMQNAT
Trigger: AGTGGCATTCTGCATTCTTCAGAAAACAAATGGGTA...AGTAAGTGTATGACCTCTCACCATTTTAAGAGGTATCAGATTCATTTGCACTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR TCA 90 bp TTCCTAATAGTGCAAATGAATCTGATACCTCTTAAAATGGTGAGAGGTCATACAATCATCTGGAAGACTTaGAAGTTAACTGCAGAACTC +
Preference number: 4 (lower is better)
Translates to: FLIVQMNLIPLKMVRGHTIIWKT*KLTAEL
Trigger: GAGTTCTGCAGTTAACTTTCAAGTCTTCCAGATGAT...TGTATGACCTCTCACCATTTTAAGAGGTATCAGATTCATTTGCACTATTAGGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR TCA 90 bp TCTAGTCTTAGCAGTGTCTTATGGTTACAATCTACTCTTCTGTTTCCTCAACAATACCTCTTAAAATGGTaGGAGGTCATACACTTACTA +
Preference number: 4 (lower is better)
Translates to: SSLSSVLWLQSTLLFPQQYLLKW*EVIHLL
Trigger: TAGTAAGTGTATGACCTCTCACCATTTTAAGAGGTA...TTGTTGAGGAAACAGAAGAGTAGATTGTAACCATAAGACACTGCTAAGACTAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR TCA 90 bp TTCCTAATAGTGCAAATGAATCTGATACCTCTTAAAATGGTGAGAGGTCATACAGATTATAGTTTACTTTaGTTAGGGAGCCATTGCACT +
Preference number: 4 (lower is better)
Translates to: FLIVQMNLIPLKMVRGHTDYSLL*LGSHCT
Trigger: AGTGCAATGGCTCCCTAATCAAAGTAAACTATAATC...TGTATGACCTCTCACCATTTTAAGAGGTATCAGATTCATTTGCACTATTAGGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp TTCCTAATAGTGCAAATGAATCTGATACCTCTTAAAATGGTGAGAGGTCATACATGTAGGCACTTTGACTaGAGTCTGATTATAGTTTAC +
Preference number: 4 (lower is better)
Translates to: FLIVQMNLIPLKMVRGHTCRHFD*SLIIVY
Trigger: GTAAACTATAATCAGACTGCAGTCAAAGTGCCTACA...TGTATGACCTCTCACCATTTTAAGAGGTATCAGATTCATTTGCACTATTAGGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp TTCCTAATAGTGCAAATGAATCTGATACCTCTTAAAATGGTGAGAGGTCATACAATTTCTTGGTCAGGATaGACAAGGAAAGATAAAGCT +
Preference number: 4 (lower is better)
Translates to: FLIVQMNLIPLKMVRGHTISWSG*TRKDKA
Trigger: AGCTTTATCTTTCCTTGTGCATCCTGACCAAGAAAT...TGTATGACCTCTCACCATTTTAAGAGGTATCAGATTCATTTGCACTATTAGGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR GCA 90 bp ATAGTGCAAATGAATCTGATACCTCTTAAAATGGTGAGAGGTCATACACTTACTATTTCTTGGTCAGGATaGACAAGGAAAGATAAAGCT +
Preference number: 4 (lower is better)
Translates to: IVQMNLIPLKMVRGHTLTISWSG*TRKDKA
Trigger: AGCTTTATCTTTCCTTGTGCATCCTGACCAAGAAAT...AGTAAGTGTATGACCTCTCACCATTTTAAGAGGTATCAGATTCATTTGCACTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp TCTAGTCTTAGCAGTGTCTTATGGTTACAATCTACTCTTCTGTTTCCTCAACAAACTTGCATAGCAAGATaGGATTCAATAAGCCTTTTT +
Preference number: 4 (lower is better)
Translates to: SSLSSVLWLQSTLLFPQQTCIAR*DSISLF
Trigger: AAAAAGGCTTATTGAATCCCATCTTGCTATGCAAGT...TTGTTGAGGAAACAGAAGAGTAGATTGTAACCATAAGACACTGCTAAGACTAGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp ATAGTGCAAATGAATCTGATACCTCTTAAAATGGTGAGAGGTCATACACTTACTATGTCGTACATACAATaGGGATGTATCAGATCTACT +
Preference number: 4 (lower is better)
Translates to: IVQMNLIPLKMVRGHTLTMSYIQ*GCIRST
Trigger: AGTAGATCTGATACATCCCCATTGTATGTACGACAT...AGTAAGTGTATGACCTCTCACCATTTTAAGAGGTATCAGATTCATTTGCACTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CCA 90 bp TTCCTAATAGTGCAAATGAATCTGATACCTCTTAAAATGGTGAGAGGTCATACAACTTGCATAGCAAGATaGGATTCAATAAGCCTTTTT +
Preference number: 4 (lower is better)
Translates to: FLIVQMNLIPLKMVRGHTTCIAR*DSISLF
Trigger: AAAAAGGCTTATTGAATCCCATCTTGCTATGCAAGT...TGTATGACCTCTCACCATTTTAAGAGGTATCAGATTCATTTGCACTATTAGGAA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS CCA 90 bp ACAGCAGGCAGCCTGCTGCGGAGGGGTTCGGCCGAGGCGCTGGGCTaGGCGCCGCTCGCTCGCTCGGAGCTGCATGAGTTCGGGCCGCGG +
Preference number: 5 (lower is better)
Translates to: TAGSLLRRGSAEALG*APLARSELHEFGPR
Trigger: CCGCGGCCCGAACTCATGCAGCTCCGAGCGAGCGAGCGGCGCCCAGCCCAGCGCCTCGGCCGAACCCCTCCGCAGCAGGCTGCCTGCTGT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226319.11
ENST00000511647.5
CDS CCA 90 bp GGGAAACAGCAGGCAGCCTGCTGCGGAGGGGTTCGGCCGAGGCGCTaGGCTGGGCGCCGCTCGCTCGCTCGGAGCTGCATGAGTTCGGGC +
Preference number: 5 (lower is better)
Translates to: GKQQAACCGGVRPRR*AGRRSLARSCMSSG
Trigger: GCCCGAACTCATGCAGCTCCGAGCGAGCGAGCGGCGCCCAGCCCAGCGCCTCGGCCGAACCCCTCCGCAGCAGGCTGCCTGCTGTTTCCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226319.11
ENST00000511647.5
CDS TCA 90 bp CCGGTGGGAGGGGAGAGAGGCTGCTATTTAAACGCCCGCGGAAGTTaGGGCACCCCCACTGGCGGGTGCCGTGCACCTGCCTCCCGCCGC +
Preference number: 5 (lower is better)
Translates to: PVGGERGCYLNARGS*GTPTGGCRAPASRR
Trigger: GCGGCGGGAGGCAGGTGCACGGCACCCGCCAGTGGGGGTGCCTCAACTTCCGCGGGCGTTTAAATAGCAGCCTCTCTCCCCTCCCACCGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000510308.5
ENST00000511925.5
ENST00000610919.4
CDS TCA 90 bp CTCCCGAGAACTCCCGAGCAAAGCAACAAAACCATCAAATATGGCTaGGCCTCTCGGCTCGTCCTGCAGCCGCCGCCGCCGCCGCCGCCG +
Preference number: 5 (lower is better)
Translates to: LPRTPEQSNKTIKYG*ASRLVLQPPPPPPP
Trigger: CGGCGGCGGCGGCGGCGGCGGCTGCAGGACGAGCCGAGAGGCTCAGCCATATTTGATGGTTTTGTTGCTTTGCTCGGGAGTTCTCGGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503785.5
ENST00000512960.5
CDS-3UTR CAA 90 bp ACAAAACTGCTCCAGGATCCTGCCTCTTCCAGGGCCGGAATCCGCGGCCTTCCCCTAACGTGGACCCACTaGGTTCCGCTACGGGTGGGC +
Preference number: 5 (lower is better)
Translates to: TKLLQDPASSRAGIRGLPLTWTH*VPLRVG
Trigger: GCCCACCCGTAGCGGAACCAAGTGGGTCCACGTTAG...GGGAAGGCCGCGGATTCCGGCCCTGGAAGAGGCAGGATCCTGGAGCAGTTTTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS CCA 90 bp TCATCCTCCAACTGCTGCAGCTTCTGCTTACGGACACTCACCCGGTaGGCCTCCTCCCGGTTCTGCTCAAGGCTGGCAAAGGGCTCCAGC +
Preference number: 5 (lower is better)
Translates to: SSSNCCSFCLRTLTR*ASSRFCSRLAKGSS
Trigger: GCTGGAGCCCTTTGCCAGCCTTGAGCAGAACCGGGAGGAGGCCCACCGGGTGAGTGTCCGTAAGCAGAAGCTGCAGCAGTTGGAGGATGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000226319.11
ENST00000413543.6
ENST00000452328.6
ENST00000511647.5
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp CCCCCACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCTCCTGTGCAGCCCCCTaGCCAAGACTCTCCTCGGGT +
Preference number: 5 (lower is better)
Translates to: PPHQSSPLANPMTSPKGFSCAAP*PRLSSG
Trigger: ACCCGAGGAGAGTCTTGGCAAGGGGGCTGCACAGGA...GAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGTGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp TCTCCCCCACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTCCTGTGCAGCCCCCTaGCCAAGACTCTCCTCGGGT +
Preference number: 5 (lower is better)
Translates to: SPPHQSSPLANPMTSPKGSCAAP*PRLSSG
Trigger: ACCCGAGGAGAGTCTTGGCAAGGGGGCTGCACAGGA...GCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGTGGGGGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp CAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCCTAACGTGGACCCACTaGGTTCCGCTACGGGTGGGC +
Preference number: 5 (lower is better)
Translates to: QSSPLANPMTSPKGFRIILTWTH*VPLRVG
Trigger: GCCCACCCGTAGCGGAACCAAGTGGGTCCACGTTAG...GATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp GACTCCATAGCTCATGCACCCCAATTACAGCAGGTGTCGGGCTGGCATAAAGGCTCCTGTGCAGCCCCCTaGCCAAGACTCTCCTCGGGT +
Preference number: 5 (lower is better)
Translates to: DSIAHAPQLQQVSGWHKGSCAAP*PRLSSG
Trigger: ACCCGAGGAGAGTCTTGGCAAGGGGGCTGCACAGGA...GCCTTTATGCCAGCCCGACACCTGCTGTAATTGGGGTGCATGAGCTATGGAGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR CAA 90 bp CATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCTCCTGTGCAGCCCCCTaGCCAAGACTCTCCTCGGGT +
Preference number: 5 (lower is better)
Translates to: HQSSPLANPMTSPKGFRISCAAP*PRLSSG
Trigger: ACCCGAGGAGAGTCTTGGCAAGGGGGCTGCACAGGA...GATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp TCTCCCCCACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCGCCGTTCCCCCTTCTTaGGAATCCGGAATCCTCCCC +
Preference number: 5 (lower is better)
Translates to: SPPHQSSPLANPMTSPKGAVPPS*ESGILP
Trigger: GGGGAGGATTCCGGATTCCAAAGAAGGGGGAACGGC...GCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGTGGGGGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp CCACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCGCCGTTCCCCCTTCTTaGGAATCCGGAATCCTCCCC +
Preference number: 5 (lower is better)
Translates to: PHQSSPLANPMTSPKGFRAVPPS*ESGILP
Trigger: GGGGAGGATTCCGGATTCCAAAGAAGGGGGAACGGC...GCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp TGTACTATTGGAAGCCAGATGGCCAGGTATTGGCAATGGCCAGGGAAATCCCAACCGCGCTCCGCCACTTaGAGCAGCAGCCGCGTCCTC +
Preference number: 5 (lower is better)
Translates to: CTIGSQMARYWQWPGKSQPRSAT*SSSRVL
Trigger: GAGGACGCGGCTGCTGCTCAAAGTGGCGGAGCGCGG...TTGGGATTTCCCTGGCCATTGCCAATACCTGGCCATCTGGCTTCCAATAGTACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610919.4
CDS-3UTR CAA 90 bp CCCCCACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCGACACAGCAGACATTTaGGCTGAACCCCCAGGGCAC +
Preference number: 5 (lower is better)
Translates to: PPHQSSPLANPMTSPKGFDTADI*AEPPGH
Trigger: GTGCCCTGGGGGTTCAGCCAAAATGTCTGCTGTGTC...GAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGTGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp TCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTAACGTGGACCCACTaGGTTCCGCTACGGGTGGGC +
Preference number: 5 (lower is better)
Translates to: SELSSSKPNDEPKGLPHHLTWTH*VPLRVG
Trigger: GCCCACCCGTAGCGGAACCAAGTGGGTCCACGTTAG...ATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp CTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTCTGTCTAACGTGGACCCACTaGGTTCCGCTACGGGTGGGC +
Preference number: 5 (lower is better)
Translates to: LSSSKPNDEPKGLPHHLCLTWTH*VPLRVG
Trigger: GCCCACCCGTAGCGGAACCAAGTGGGTCCACGTTAG...ACAGAGATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp AGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTCTTCCTGTGCAGCCCCCTaGCCAAGACTCTCCTCGGGT +
Preference number: 5 (lower is better)
Translates to: SSPLANPMTSPKGFRIISSCAAP*PRLSSG
Trigger: ACCCGAGGAGAGTCTTGGCAAGGGGGCTGCACAGGA...AGAGATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp CCCCCACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCGTGGCAGCTCTTGTGTaGTCCAGATGCCTCTGGGAC +
Preference number: 5 (lower is better)
Translates to: PPHQSSPLANPMTSPKGFVAALV*SRCLWD
Trigger: GTCCCAGAGGCATCTGGACAACACAAGAGCTGCCAC...GAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGTGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp TCTCCCCCACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCGTGGCAGCTCTTGTGTaGTCCAGATGCCTCTGGGAC +
Preference number: 5 (lower is better)
Translates to: SPPHQSSPLANPMTSPKGVAALV*SRCLWD
Trigger: GTCCCAGAGGCATCTGGACAACACAAGAGCTGCCAC...GCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGTGGGGGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp CCACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCGGGAGGTGGCAGCTCTaGTGTTGTCCAGATGCCTCT +
Preference number: 5 (lower is better)
Translates to: PHQSSPLANPMTSPKGFRGRWQL*CCPDAS
Trigger: AGAGGCATCTGGACAACACAAGAGCTGCCACCTCCC...GCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp TCTCCCCCACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCGGGAGGTGGCAGCTCTaGTGTTGTCCAGATGCCTCT +
Preference number: 5 (lower is better)
Translates to: SPPHQSSPLANPMTSPKGGRWQL*CCPDAS
Trigger: AGAGGCATCTGGACAACACAAGAGCTGCCACCTCCC...GCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGTGGGGGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp CCCCCACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCGCACTATCTCCTTCCTaGTGCCAGGTGCTGACTGCC +
Preference number: 5 (lower is better)
Translates to: PPHQSSPLANPMTSPKGFALSPS*CQVLTA
Trigger: GGCAGTCAGCACCTGGCACAAGGAAGGAGATAGTGC...GAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGTGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp GAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTCGCCGTTCCCCCTTCTTaGGAATCCGGAATCCTCCCC +
Preference number: 5 (lower is better)
Translates to: ELSSSKPNDEPKGLPHHLAVPPS*ESGILP
Trigger: GGGGAGGATTCCGGATTCCAAAGAAGGGGGAACGGC...GAGATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp CAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCGCCGTTCCCCCTTCTTaGGAATCCGGAATCCTCCCC +
Preference number: 5 (lower is better)
Translates to: QSSPLANPMTSPKGFRIIAVPPS*ESGILP
Trigger: GGGGAGGATTCCGGATTCCAAAGAAGGGGGAACGGC...GATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS GCA 90 bp CAATGCCCAAGTTACTGGTGGGATAGTAACGCTGCGCTCAGCGGCTaGCTCCCTCCCTCCTCGCTACAGATCGAGAACCCAATCTTTTGG +
Preference number: 5 (lower is better)
Translates to: QCPSYWWDSNAALSG*LPPSSLQIENPIFW
Trigger: CCAAAAGATTGGGTTCTCGATCTGTAGCGAGGAGGGAGGGAGGCAGCCGCTGAGCGCAGCGTTACTATCCCACCAGTAACTTGGGCATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512960.5
ENST00000514740.1
CDS-3UTR CAA 90 bp CAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCGACACAGCAGACATTTaGGCTGAACCCCCAGGGCAC +
Preference number: 5 (lower is better)
Translates to: QSSPLANPMTSPKGFRIIDTADI*AEPPGH
Trigger: GTGCCCTGGGGGTTCAGCCAAAATGTCTGCTGTGTC...GATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp GTCCCATATCCACAACCCACTCACAGGCTTCAAGCAGCAGGACCTTGCCATATTCTAACGTGGACCCACTaGGTTCCGCTACGGGTGGGC +
Preference number: 5 (lower is better)
Translates to: VPYPQPTHRLQAAGPCHILTWTH*VPLRVG
Trigger: GCCCACCCGTAGCGGAACCAAGTGGGTCCACGTTAG...AATATGGCAAGGTCCTGCTGCTTGAAGCCTGTGAGTGGGTTGTGGATATGGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp GTCCCATATCCACAACCCACTCACAGGCTTCAAGCAGCAGGACCTTGCCATATTTCCTGTGCAGCCCCCTaGCCAAGACTCTCCTCGGGT +
Preference number: 5 (lower is better)
Translates to: VPYPQPTHRLQAAGPCHISCAAP*PRLSSG
Trigger: ACCCGAGGAGAGTCTTGGCAAGGGGGCTGCACAGGA...AATATGGCAAGGTCCTGCTGCTTGAAGCCTGTGAGTGGGTTGTGGATATGGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp CCACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCGGGGTGATCAGGGGCTaGTTGAAGTTGACCTTCCTC +
Preference number: 5 (lower is better)
Translates to: PHQSSPLANPMTSPKGFRGVIRG*LKLTFL
Trigger: GAGGAAGGTCAACTTCAACAAGCCCCTGATCACCCC...GCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp CCCACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGGGGGTGATCAGGGGCTaGTTGAAGTTGACCTTCCTC +
Preference number: 5 (lower is better)
Translates to: PTSELSSSKPNDEPKGLPGVIRG*LKLTFL
Trigger: GAGGAAGGTCAACTTCAACAAGCCCCTGATCACCCC...CGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp GAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTCGGGAGGTGGCAGCTCTaGTGTTGTCCAGATGCCTCT +
Preference number: 5 (lower is better)
Translates to: ELSSSKPNDEPKGLPHHLGRWQL*CCPDAS
Trigger: AGAGGCATCTGGACAACACAAGAGCTGCCACCTCCC...GAGATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp GAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTCGCACTATCTCCTTCCTaGTGCCAGGTGCTGACTGCC +
Preference number: 5 (lower is better)
Translates to: ELSSSKPNDEPKGLPHHLALSPS*CQVLTA
Trigger: GGCAGTCAGCACCTGGCACAAGGAAGGAGATAGTGC...GAGATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp CAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCGCACTATCTCCTTCCTaGTGCCAGGTGCTGACTGCC +
Preference number: 5 (lower is better)
Translates to: QSSPLANPMTSPKGFRIIALSPS*CQVLTA
Trigger: GGCAGTCAGCACCTGGCACAAGGAAGGAGATAGTGC...GATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp TCTCCCCCACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCCCAGATGGCCAGGTATaGGCAATGGCCAGGGAAATC +
Preference number: 5 (lower is better)
Translates to: SPPHQSSPLANPMTSPKGPDGQV*AMAREI
Trigger: GATTTCCCTGGCCATTGCCAATACCTGGCCATCTGG...GCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGTGGGGGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp GCCAACAGCCACGACATTCAGCAATCTCAGTGTGACAAACAACACATCTGTAGCAAACGCCCGCGGAAGTaGAGGCACCCCCACTGGCGG +
Preference number: 5 (lower is better)
Translates to: ANSHDIQQSQCDKQHICSKRPRK*RHPHWR
Trigger: CCGCCAGTGGGGGTGCCTCAACTTCCGCGGGCGTTT...GCTACAGATGTGTTGTTTGTCACACTGAGATTGCTGAATGTCGTGGCTGTTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413543.6
CDS-3UTR CAA 90 bp ACGCCTCATTATTCCTGTAGCAGGAAGGGACGTCCAGACGGGACTCCAGAGGTGACTGGCTATCATTTCTaGCTCTGGGCGAGCGTTCGC +
Preference number: 5 (lower is better)
Translates to: TPHYSCSRKGRPDGTPEVTGYHF*LWASVR
Trigger: GCGAACGCTCGCCCAGAGCAAGAAATGATAGCCAGT...CACCTCTGGAGTCCCGTCTGGACGTCCCTTCCTGCTACAGGAATAATGAGGCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR CAA 90 bp GGGACGTCCAGACGGGACTCCAGAGGTGATGGAAAGTGGGGGAGGCACAAAAGCCCTTGGGTCATTTTCTaGGGGCTCATTCACTCTAGC +
Preference number: 5 (lower is better)
Translates to: GTSRRDSRGDGKWGRHKSPWVIF*GLIHSS
Trigger: GCTAGAGTGAATGAGCCCCAAGAAAATGACCCAAGG...GCTTTTGTGCCTCCCCCACTTTCCATCACCTCTGGAGTCCCGTCTGGACGTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR CAA 90 bp ACAAAACTGCTCCAGGATCCTGCCTCTTCCAGGGCCGGAATCCGCGGCCTTCCCCAAACAATAGACTTCTaGTCCTCCCCCTCCCAACAA +
Preference number: 5 (lower is better)
Translates to: TKLLQDPASSRAGIRGLPQTIDF*SSPSQQ
Trigger: TTGTTGGGAGGGGGAGGACAAGAAGTCTATTGTTTG...GGGAAGGCCGCGGATTCCGGCCCTGGAAGAGGCAGGATCCTGGAGCAGTTTTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS CCA 90 bp AAAGCTCTCTGGGACCACCATCCCCTCCCTTCTACCACACAGGTCTaGCTGCTTCAGCAGGGTTTTGCCTTCACTTCCAGGGCTATTCTG +
Preference number: 5 (lower is better)
Translates to: KALWDHHPLPSTTQV*LLQQGFAFTSRAIL
Trigger: CAGAATAGCCCTGGAAGTGAAGGCAAAACCCTGCTGAAGCAGCCAGACCTGTGTGGTAGAAGGGAGGGGATGGTGGTCCCAGAGAGCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp CCACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCCAGAACACCATCTCATaGCCGTCCTCACCATCAGGA +
Preference number: 5 (lower is better)
Translates to: PHQSSPLANPMTSPKGFRQNTIS*PSSPSG
Trigger: TCCTGATGGTGAGGACGGCAATGAGATGGTGTTCTG...GCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp TCTCCCCCACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCACATCCTGCTCCCGCTaGGCTAGATTGTCCTCTTCA +
Preference number: 5 (lower is better)
Translates to: SPPHQSSPLANPMTSPKGTSCSR*ARLSSS
Trigger: TGAAGAGGACAATCTAGCCAAGCGGGAGCAGGATGT...GCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGTGGGGGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp CCCACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGACATCCTGCTCCCGCTaGGCTAGATTGTCCTCTTCA +
Preference number: 5 (lower is better)
Translates to: PTSELSSSKPNDEPKGLPTSCSR*ARLSSS
Trigger: TGAAGAGGACAATCTAGCCAAGCGGGAGCAGGATGT...CGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp AGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTCTGTGGCAGCTCTTGTGTaGTCCAGATGCCTCTGGGAC +
Preference number: 5 (lower is better)
Translates to: SSPLANPMTSPKGFRIISVAALV*SRCLWD
Trigger: GTCCCAGAGGCATCTGGACAACACAAGAGCTGCCAC...AGAGATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp AGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTCTGCACTATCTCCTTCCTaGTGCCAGGTGCTGACTGCC +
Preference number: 5 (lower is better)
Translates to: SSPLANPMTSPKGFRIISALSPS*CQVLTA
Trigger: GGCAGTCAGCACCTGGCACAAGGAAGGAGATAGTGC...AGAGATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp CCACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCAGGGAGCCATTGCACTaGGGCACTATCTCCTTCCTT +
Preference number: 5 (lower is better)
Translates to: PHQSSPLANPMTSPKGFRREPLH*GTISFL
Trigger: AAGGAAGGAGATAGTGCCCAAGTGCAATGGCTCCCT...GCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp CAGGGAAATCCCAAGCTGGCTCAAGAGCCAGTGGTTAGGGAAGAAGAAGGTCAAGCCGTTCCCCCTTCTTaGGAATCCGGAATCCTCCCC +
Preference number: 5 (lower is better)
Translates to: QGNPKLAQEPVVREEEGQAVPPS*ESGILP
Trigger: GGGGAGGATTCCGGATTCCAAAGAAGGGGGAACGGC...TTGACCTTCTTCTTCCCTAACCACTGGCTCTTGAGCCAGCTTGGGATTTCCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp CAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCCCAGATGGCCAGGTATaGGCAATGGCCAGGGAAATC +
Preference number: 5 (lower is better)
Translates to: QSSPLANPMTSPKGFRIIPDGQV*AMAREI
Trigger: GATTTCCCTGGCCATTGCCAATACCTGGCCATCTGG...GATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp CCCACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGGTAGCCACTGTACTATaGGAAGCCAGATGGCCAGGT +
Preference number: 5 (lower is better)
Translates to: PTSELSSSKPNDEPKGLPVATVL*EARWPG
Trigger: ACCTGGCCATCTGGCTTCCAATAGTACAGTGGCTAC...CGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp TTCAGGCATTCCCATCTCCTTAAATTCTTCATTGGTCAGTTCCAGCCATGCAGCAAACGCCCGCGGAAGTaGAGGCACCCCCACTGGCGG +
Preference number: 5 (lower is better)
Translates to: FRHSHLLKFFIGQFQPCSKRPRK*RHPHWR
Trigger: CCGCCAGTGGGGGTGCCTCAACTTCCGCGGGCGTTT...GCTGCATGGCTGGAACTGACCAATGAAGAATTTAAGGAGATGGGAATGCCTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511925.5
CDS-3UTR CAA 90 bp GACTCCATAGCTCATGCACCCCAATTACAGCAGGTGTCGGGCTGGCATAAAGGCGTTGACAGGCTGCCATaGTCGTCAGAATCCTCACTG +
Preference number: 5 (lower is better)
Translates to: DSIAHAPQLQQVSGWHKGVDRLP*SSESSL
Trigger: CAGTGAGGATTCTGACGACAATGGCAGCCTGTCAAC...GCCTTTATGCCAGCCCGACACCTGCTGTAATTGGGGTGCATGAGCTATGGAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR CAA 90 bp CCCCCACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCGACACGATGTACTTCTaGGGCCTGATGAACATGAGG +
Preference number: 5 (lower is better)
Translates to: PPHQSSPLANPMTSPKGFDTMYF*GLMNMR
Trigger: CCTCATGTTCATCAGGCCCAAGAAGTACATCGTGTC...GAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGTGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp CCCACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGGACACGATGTACTTCTaGGGCCTGATGAACATGAGG +
Preference number: 5 (lower is better)
Translates to: PTSELSSSKPNDEPKGLPDTMYF*GLMNMR
Trigger: CCTCATGTTCATCAGGCCCAAGAAGTACATCGTGTC...CGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp GAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTCCAGAACACCATCTCATaGCCGTCCTCACCATCAGGA +
Preference number: 5 (lower is better)
Translates to: ELSSSKPNDEPKGLPHHLQNTIS*PSSPSG
Trigger: TCCTGATGGTGAGGACGGCAATGAGATGGTGTTCTG...GAGATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp CATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCCAGAACACCATCTCATaGCCGTCCTCACCATCAGGA +
Preference number: 5 (lower is better)
Translates to: HQSSPLANPMTSPKGFRIQNTIS*PSSPSG
Trigger: TCCTGATGGTGAGGACGGCAATGAGATGGTGTTCTG...GATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp AATCCCAAGCTGGCTCAAGAGCCAGTGGTTAGGGAAGAAGAAGGTCAAGTGGACGACACAGCAGACATTTaGGCTGAACCCCCAGGGCAC +
Preference number: 5 (lower is better)
Translates to: NPKLAQEPVVREEEGQVDDTADI*AEPPGH
Trigger: GTGCCCTGGGGGTTCAGCCAAAATGTCTGCTGTGTC...GTCCACTTGACCTTCTTCTTCCCTAACCACTGGCTCTTGAGCCAGCTTGGGATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp TCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTCTGTTGACACAGCAGACATTTaGGCTGAACCCCCAGGGCAC +
Preference number: 5 (lower is better)
Translates to: SPLANPMTSPKGFRIISVDTADI*AEPPGH
Trigger: GTGCCCTGGGGGTTCAGCCAAAATGTCTGCTGTGTC...AACAGAGATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp TCCCCTGTGAATTACCCAAGAAACAAAGTGGGGGCCAGTGAGCAGCCGTGCTTAGCCCCAAACTTCTCATaGCAGAGGCTGCACACTAGC +
Preference number: 5 (lower is better)
Translates to: SPVNYPRNKVGASEQPCLAPNFS*QRLHTS
Trigger: GCTAGTGTGCAGCCTCTGCAATGAGAAGTTTGGGGC...TAAGCACGGCTGCTCACTGGCCCCCACTTTGTTTCTTGGGTAATTCACAGGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR CAA 90 bp AGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTCTGCCCCAAACTTCTCATaGCAGAGGCTGCACACTAGC +
Preference number: 5 (lower is better)
Translates to: SSPLANPMTSPKGFRIISAPNFS*QRLHTS
Trigger: GCTAGTGTGCAGCCTCTGCAATGAGAAGTTTGGGGC...AGAGATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp TCTCCCCCACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCGTGATCAGGGGCTTGTaGAAGTTGACCTTCCTCTTC +
Preference number: 5 (lower is better)
Translates to: SPPHQSSPLANPMTSPKGVIRGL*KLTFLF
Trigger: GAAGAGGAAGGTCAACTTCAACAAGCCCCTGATCAC...GCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGTGGGGGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp CTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTCTGTGGGGTGATCAGGGGCTaGTTGAAGTTGACCTTCCTC +
Preference number: 5 (lower is better)
Translates to: LSSSKPNDEPKGLPHHLCGVIRG*LKLTFL
Trigger: GAGGAAGGTCAACTTCAACAAGCCCCTGATCACCCC...ACAGAGATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp GGGACGTCCAGACGGGACTCCAGAGGTGATGGAAAGTGGGGGAGGCACAAAAGCTCCCGCTTGGCTAGATaGTCCTCTTCATCTTTCTTT +
Preference number: 5 (lower is better)
Translates to: GTSRRDSRGDGKWGRHKSSRLAR*SSSSFF
Trigger: AAAGAAAGATGAAGAGGACAATCTAGCCAAGCGGGA...GCTTTTGTGCCTCCCCCACTTTCCATCACCTCTGGAGTCCCGTCTGGACGTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR CAA 90 bp CAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTGCTTCAGCAGGGTTTaGCCTTCACTTCCAGGGCTA +
Preference number: 5 (lower is better)
Translates to: QSSPLANPMTSPKGFRIICFSRV*PSLPGL
Trigger: TAGCCCTGGAAGTGAAGGCAAAACCCTGCTGAAGCA...GATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp GTCCCATATCCACAACCCACTCACAGGCTTCAAGCAGCAGGACCTTGCCATATTGTGGCAGCTCTTGTGTaGTCCAGATGCCTCTGGGAC +
Preference number: 5 (lower is better)
Translates to: VPYPQPTHRLQAAGPCHIVAALV*SRCLWD
Trigger: GTCCCAGAGGCATCTGGACAACACAAGAGCTGCCAC...AATATGGCAAGGTCCTGCTGCTTGAAGCCTGTGAGTGGGTTGTGGATATGGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp CAGGGAAATCCCAAGCTGGCTCAAGAGCCAGTGGTTAGGGAAGAAGAAGGTCAAGTGGCAGCTCTTGTGTaGTCCAGATGCCTCTGGGAC +
Preference number: 5 (lower is better)
Translates to: QGNPKLAQEPVVREEEGQVAALV*SRCLWD
Trigger: GTCCCAGAGGCATCTGGACAACACAAGAGCTGCCAC...TTGACCTTCTTCTTCCCTAACCACTGGCTCTTGAGCCAGCTTGGGATTTCCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp TCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTCTGTTGGGAGGTGGCAGCTCTaGTGTTGTCCAGATGCCTCT +
Preference number: 5 (lower is better)
Translates to: SPLANPMTSPKGFRIISVGRWQL*CCPDAS
Trigger: AGAGGCATCTGGACAACACAAGAGCTGCCACCTCCC...AACAGAGATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp CCCACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGTTGATTAGGGAGCCATaGCACTTGGGCACTATCTCC +
Preference number: 5 (lower is better)
Translates to: PTSELSSSKPNDEPKGLPLIREP*HLGTIS
Trigger: GGAGATAGTGCCCAAGTGCAATGGCTCCCTAATCAA...CGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp ACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATGTTGACAGGCTGCCATaGTCGTCAGAATCCTCACTG +
Preference number: 5 (lower is better)
Translates to: TSELSSSKPNDEPKGLPHVDRLP*SSESSL
Trigger: CAGTGAGGATTCTGACGACAATGGCAGCCTGTCAAC...ATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp CATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCGACACGATGTACTTCTaGGGCCTGATGAACATGAGG +
Preference number: 5 (lower is better)
Translates to: HQSSPLANPMTSPKGFRIDTMYF*GLMNMR
Trigger: CCTCATGTTCATCAGGCCCAAGAAGTACATCGTGTC...GATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp GAGACAAACACAGTCCAAACAATAGACTTCTTGTCCTCCCCCTCCCAACAACTACTAACGTGGACCCACTaGGTTCCGCTACGGGTGGGC +
Preference number: 5 (lower is better)
Translates to: ETNTVQTIDFLSSPSQQLLTWTH*VPLRVG
Trigger: GCCCACCCGTAGCGGAACCAAGTGGGTCCACGTTAG...TAGTTGTTGGGAGGGGGAGGACAAGAAGTCTATTGTTTGGACTGTGTTTGTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR CAA 90 bp GTCCCATATCCACAACCCACTCACAGGCTTCAAGCAGCAGGACCTTGCCATATTGCCCCAAACTTCTCATaGCAGAGGCTGCACACTAGC +
Preference number: 5 (lower is better)
Translates to: VPYPQPTHRLQAAGPCHIAPNFS*QRLHTS
Trigger: GCTAGTGTGCAGCCTCTGCAATGAGAAGTTTGGGGC...AATATGGCAAGGTCCTGCTGCTTGAAGCCTGTGAGTGGGTTGTGGATATGGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp CCCACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGAGGGGCTTGTTGAAGTaGACCTTCCTCTTCAACTTC +
Preference number: 5 (lower is better)
Translates to: PTSELSSSKPNDEPKGLPRGLLK*TFLFNF
Trigger: GAAGTTGAAGAGGAAGGTCAACTTCAACAAGCCCCT...CGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp GACTCCATAGCTCATGCACCCCAATTACAGCAGGTGTCGGGCTGGCATAAAGGCGTGATCAGGGGCTTGTaGAAGTTGACCTTCCTCTTC +
Preference number: 5 (lower is better)
Translates to: DSIAHAPQLQQVSGWHKGVIRGL*KLTFLF
Trigger: GAAGAGGAAGGTCAACTTCAACAAGCCCCTGATCAC...GCCTTTATGCCAGCCCGACACCTGCTGTAATTGGGGTGCATGAGCTATGGAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR CAA 90 bp CTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTCTGTACATCCTGCTCCCGCTaGGCTAGATTGTCCTCTTCA +
Preference number: 5 (lower is better)
Translates to: LSSSKPNDEPKGLPHHLCTSCSR*ARLSSS
Trigger: TGAAGAGGACAATCTAGCCAAGCGGGAGCAGGATGT...ACAGAGATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp TCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATACATCCTGCTCCCGCTaGGCTAGATTGTCCTCTTCA +
Preference number: 5 (lower is better)
Translates to: SELSSSKPNDEPKGLPHHTSCSR*ARLSSS
Trigger: TGAAGAGGACAATCTAGCCAAGCGGGAGCAGGATGT...ATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp CATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCTTCAAGTCCTCTATCTaGGGAGCATCAGGGCCAACA +
Preference number: 5 (lower is better)
Translates to: HQSSPLANPMTSPKGFRIFKSSI*GASGPT
Trigger: TGTTGGCCCTGATGCTCCCAAGATAGAGGACTTGAA...GATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp CTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTCTGTTGCTTCAGCAGGGTTTaGCCTTCACTTCCAGGGCTA +
Preference number: 5 (lower is better)
Translates to: LSSSKPNDEPKGLPHHLCCFSRV*PSLPGL
Trigger: TAGCCCTGGAAGTGAAGGCAAAACCCTGCTGAAGCA...ACAGAGATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp GAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTCTTGATTAGGGAGCCATaGCACTTGGGCACTATCTCC +
Preference number: 5 (lower is better)
Translates to: ELSSSKPNDEPKGLPHHLLIREP*HLGTIS
Trigger: GGAGATAGTGCCCAAGTGCAATGGCTCCCTAATCAA...GAGATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp CCCACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGTCCGCATCATCTCTGTaGCATCAAGAAGCCAAGATG +
Preference number: 5 (lower is better)
Translates to: PTSELSSSKPNDEPKGLPSASSL*HQEAKM
Trigger: CATCTTGGCTTCTTGATGCAACAGAGATGATGCGGA...CGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp TCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATGTAGCCACTGTACTATaGGAAGCCAGATGGCCAGGT +
Preference number: 5 (lower is better)
Translates to: SELSSSKPNDEPKGLPHHVATVL*EARWPG
Trigger: ACCTGGCCATCTGGCTTCCAATAGTACAGTGGCTAC...ATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp CTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTCTGTGTAGCCACTGTACTATaGGAAGCCAGATGGCCAGGT +
Preference number: 5 (lower is better)
Translates to: LSSSKPNDEPKGLPHHLCVATVL*EARWPG
Trigger: ACCTGGCCATCTGGCTTCCAATAGTACAGTGGCTAC...ACAGAGATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp CCCCCACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCTGGAAGTTCTTCGCTaGAACTTGAGTAGCCACTGT +
Preference number: 5 (lower is better)
Translates to: PPHQSSPLANPMTSPKGFLEVLR*NLSSHC
Trigger: ACAGTGGCTACTCAAGTTCAAGCGAAGAACTTCCAG...GAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGTGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS CCA 90 bp TCATGTCTGGAGCAGGAGCTTCTCCTATGCTGGGATCGGGAATTCTaGGACCAAGTAGTTGACAGGCTGCCATTGTCGTCAGAATCCTCA +
Preference number: 5 (lower is better)
Translates to: SCLEQELLLCWDREF*DQVVDRLPLSSESS
Trigger: TGAGGATTCTGACGACAATGGCAGCCTGTCAACTACTTGGTCCCAGAATTCCCGATCCCAGCATAGGAGAAGCTCCTGCTCCAGACATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000226319.11
ENST00000413543.6
ENST00000452328.6
ENST00000503785.5
ENST00000504089.5
ENST00000507833.5
ENST00000508997.1
ENST00000510308.5
ENST00000511647.5
ENST00000511925.5
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp TCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTCTGTTGTTGACAGGCTGCCATaGTCGTCAGAATCCTCACTG +
Preference number: 5 (lower is better)
Translates to: SPLANPMTSPKGFRIISVVDRLP*SSESSL
Trigger: CAGTGAGGATTCTGACGACAATGGCAGCCTGTCAAC...AACAGAGATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp CTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTCTGTGACACGATGTACTTCTaGGGCCTGATGAACATGAGG +
Preference number: 5 (lower is better)
Translates to: LSSSKPNDEPKGLPHHLCDTMYF*GLMNMR
Trigger: CCTCATGTTCATCAGGCCCAAGAAGTACATCGTGTC...ACAGAGATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp TCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTCTGTTCAGAACACCATCTCATaGCCGTCCTCACCATCAGGA +
Preference number: 5 (lower is better)
Translates to: SPLANPMTSPKGFRIISVQNTIS*PSSPSG
Trigger: TCCTGATGGTGAGGACGGCAATGAGATGGTGTTCTG...AACAGAGATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp GCCAACAGCCACGACATTCAGCAATCTCAGTGTGACAAACAACACATCTGTAGCGACACAGCAGACATTTaGGCTGAACCCCCAGGGCAC +
Preference number: 5 (lower is better)
Translates to: ANSHDIQQSQCDKQHICSDTADI*AEPPGH
Trigger: GTGCCCTGGGGGTTCAGCCAAAATGTCTGCTGTGTC...GCTACAGATGTGTTGTTTGTCACACTGAGATTGCTGAATGTCGTGGCTGTTGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR CAA 90 bp TGTACTATTGGAAGCCAGATGGCCAGGTATTGGCAATGGCCAGGGAAATCCCAAGCCCCAAACTTCTCATaGCAGAGGCTGCACACTAGC +
Preference number: 5 (lower is better)
Translates to: CTIGSQMARYWQWPGKSQAPNFS*QRLHTS
Trigger: GCTAGTGTGCAGCCTCTGCAATGAGAAGTTTGGGGC...TTGGGATTTCCCTGGCCATTGCCAATACCTGGCCATCTGGCTTCCAATAGTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp GGCCACTTGGGTACCTTTCAGTGCAGACTGCTTCAGGCCAGAAAACCTCACTCCAGGGGCTTGTTGAAGTaGACCTTCCTCTTCAACTTC +
Preference number: 5 (lower is better)
Translates to: GHLGTFQCRLLQARKPHSRGLLK*TFLFNF
Trigger: GAAGTTGAAGAGGAAGGTCAACTTCAACAAGCCCCT...GGAGTGAGGTTTTCTGGCCTGAAGCAGTCTGCACTGAAAGGTACCCAAGTGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR CAA 90 bp GAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTCAGGGGCTTGTTGAAGTaGACCTTCCTCTTCAACTTC +
Preference number: 5 (lower is better)
Translates to: ELSSSKPNDEPKGLPHHLRGLLK*TFLFNF
Trigger: GAAGTTGAAGAGGAAGGTCAACTTCAACAAGCCCCT...GAGATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp TCCCCTGTGAATTACCCAAGAAACAAAGTGGGGGCCAGTGAGCAGCCGTGCTTAGTGATCAGGGGCTTGTaGAAGTTGACCTTCCTCTTC +
Preference number: 5 (lower is better)
Translates to: SPVNYPRNKVGASEQPCLVIRGL*KLTFLF
Trigger: GAAGAGGAAGGTCAACTTCAACAAGCCCCTGATCAC...TAAGCACGGCTGCTCACTGGCCCCCACTTTGTTTCTTGGGTAATTCACAGGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR CAA 90 bp ACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATGTGATCAGGGGCTTGTaGAAGTTGACCTTCCTCTTC +
Preference number: 5 (lower is better)
Translates to: TSELSSSKPNDEPKGLPHVIRGL*KLTFLF
Trigger: GAAGAGGAAGGTCAACTTCAACAAGCCCCTGATCAC...ATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp TGTACTATTGGAAGCCAGATGGCCAGGTATTGGCAATGGCCAGGGAAATCCCAAGGGGTGATCAGGGGCTaGTTGAAGTTGACCTTCCTC +
Preference number: 5 (lower is better)
Translates to: CTIGSQMARYWQWPGKSQGVIRG*LKLTFL
Trigger: GAGGAAGGTCAACTTCAACAAGCCCCTGATCACCCC...TTGGGATTTCCCTGGCCATTGCCAATACCTGGCCATCTGGCTTCCAATAGTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp CCCACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGTCCCGCTTGGCTAGATaGTCCTCTTCATCTTTCTTT +
Preference number: 5 (lower is better)
Translates to: PTSELSSSKPNDEPKGLPSRLAR*SSSSFF
Trigger: AAAGAAAGATGAAGAGGACAATCTAGCCAAGCGGGA...CGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp CAAAGTCTTCTTTACACTCACCACCAGGGGGCGTATGGGAGCACAAAAGCCTCAACATCCTGCTCCCGCTaGGCTAGATTGTCCTCTTCA +
Preference number: 5 (lower is better)
Translates to: QSLLYTHHQGAYGSTKASTSCSR*ARLSSS
Trigger: TGAAGAGGACAATCTAGCCAAGCGGGAGCAGGATGT...TGAGGCTTTTGTGCTCCCATACGCCCCCTGGTGGTGAGTGTAAAGAAGACTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR CAA 90 bp GTCCCATATCCACAACCCACTCACAGGCTTCAAGCAGCAGGACCTTGCCATATTACATCCTGCTCCCGCTaGGCTAGATTGTCCTCTTCA +
Preference number: 5 (lower is better)
Translates to: VPYPQPTHRLQAAGPCHITSCSR*ARLSSS
Trigger: TGAAGAGGACAATCTAGCCAAGCGGGAGCAGGATGT...AATATGGCAAGGTCCTGCTGCTTGAAGCCTGTGAGTGGGTTGTGGATATGGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp TCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATTTCAAGTCCTCTATCTaGGGAGCATCAGGGCCAACA +
Preference number: 5 (lower is better)
Translates to: SELSSSKPNDEPKGLPHHFKSSI*GASGPT
Trigger: TGTTGGCCCTGATGCTCCCAAGATAGAGGACTTGAA...ATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp CAGGGAAATCCCAAGCTGGCTCAAGAGCCAGTGGTTAGGGAAGAAGAAGGTCAATGCTTCAGCAGGGTTTaGCCTTCACTTCCAGGGCTA +
Preference number: 5 (lower is better)
Translates to: QGNPKLAQEPVVREEEGQCFSRV*PSLPGL
Trigger: TAGCCCTGGAAGTGAAGGCAAAACCCTGCTGAAGCA...TTGACCTTCTTCTTCCCTAACCACTGGCTCTTGAGCCAGCTTGGGATTTCCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp AATCCCAAGCTGGCTCAAGAGCCAGTGGTTAGGGAAGAAGAAGGTCAAGTGGACAGGGAGCCATTGCACTaGGGCACTATCTCCTTCCTT +
Preference number: 5 (lower is better)
Translates to: NPKLAQEPVVREEEGQVDREPLH*GTISFL
Trigger: AAGGAAGGAGATAGTGCCCAAGTGCAATGGCTCCCT...GTCCACTTGACCTTCTTCTTCCCTAACCACTGGCTCTTGAGCCAGCTTGGGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp TCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTCTGTTAGGGAGCCATTGCACTaGGGCACTATCTCCTTCCTT +
Preference number: 5 (lower is better)
Translates to: SPLANPMTSPKGFRIISVREPLH*GTISFL
Trigger: AAGGAAGGAGATAGTGCCCAAGTGCAATGGCTCCCT...AACAGAGATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp TCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATTTGATTAGGGAGCCATaGCACTTGGGCACTATCTCC +
Preference number: 5 (lower is better)
Translates to: SELSSSKPNDEPKGLPHHLIREP*HLGTIS
Trigger: GGAGATAGTGCCCAAGTGCAATGGCTCCCTAATCAA...ATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp CCCACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCAGGTAACCATGAGTTaGTGCTTTGGGAAGAATGCA +
Preference number: 5 (lower is better)
Translates to: PTSELSSSKPNDEPKGLPQVTMS*CFGKNA
Trigger: TGCATTCTTCCCAAAGCACAAACTCATGGTTACCTG...CGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp GAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTCCTGGAAGTTCTTCGCTaGAACTTGAGTAGCCACTGT +
Preference number: 5 (lower is better)
Translates to: ELSSSKPNDEPKGLPHHLLEVLR*NLSSHC
Trigger: ACAGTGGCTACTCAAGTTCAAGCGAAGAACTTCCAG...GAGATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp CAGTGGTTAGGGAAGAAGAAGGTCAAGTGGACTGGTAAAAATTCTACTTCAACTAAACGCCCGCGGAAGTaGAGGCACCCCCACTGGCGG +
Preference number: 5 (lower is better)
Translates to: QWLGKKKVKWTGKNSTSTKRPRK*RHPHWR
Trigger: CCGCCAGTGGGGGTGCCTCAACTTCCGCGGGCGTTT...AGTTGAAGTAGAATTTTTACCAGTCCACTTGACCTTCTTCTTCCCTAACCACTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000610919.4
CDS-3UTR CAA 90 bp TCCCCTGTGAATTACCCAAGAAACAAAGTGGGGGCCAGTGAGCAGCCGTGCTTAACTGTTTCAGGCCACTaGGGTACCTTTCAGTGCAGA +
Preference number: 5 (lower is better)
Translates to: SPVNYPRNKVGASEQPCLTVSGH*GTFQCR
Trigger: TCTGCACTGAAAGGTACCCAAGTGGCCTGAAACAGT...TAAGCACGGCTGCTCACTGGCCCCCACTTTGTTTCTTGGGTAATTCACAGGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS CCA 90 bp TTTCTCTTCAGACACAACCCTCTGAAGGCTTTCGATCTTCATGTCTaGAGCAGGAGCTTCTCCTATGCTGGGATCGGGAATTCTGGGACC +
Preference number: 5 (lower is better)
Translates to: FLFRHNPLKAFDLHV*SRSFSYAGIGNSGT
Trigger: GGTCCCAGAATTCCCGATCCCAGCATAGGAGAAGCTCCTGCTCCAGACATGAAGATCGAAAGCCTTCAGAGGGTTGTGTCTGAAGAGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511925.5
CDS-3UTR CAA 90 bp AGCAGGTGTCGGGCTGGCATAAAGGCTTCTTACCAGGATTCCAGTTTATCCTTCGTTGACAGGCTGCCATaGTCGTCAGAATCCTCACTG +
Preference number: 5 (lower is better)
Translates to: SRCRAGIKASYQDSSLSFVDRLP*SSESSL
Trigger: CAGTGAGGATTCTGACGACAATGGCAGCCTGTCAAC...GAAGGATAAACTGGAATCCTGGTAAGAAGCCTTTATGCCAGCCCGACACCTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR CAA 90 bp CCACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCTCCTTAAATTCTTCATaGGTCAGTTCCAGCCATGCA +
Preference number: 5 (lower is better)
Translates to: PHQSSPLANPMTSPKGFRSLNSS*VSSSHA
Trigger: TGCATGGCTGGAACTGACCAATGAAGAATTTAAGGA...GCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp ACTGTTTCAGGCCACTTGGGTACCTTTCAGTGCAGACTGCTTCAGGCCAGAAAACAGAACACCATCTCATaGCCGTCCTCACCATCAGGA +
Preference number: 5 (lower is better)
Translates to: TVSGHLGTFQCRLLQARKQNTIS*PSSPSG
Trigger: TCCTGATGGTGAGGACGGCAATGAGATGGTGTTCTG...TTTTCTGGCCTGAAGCAGTCTGCACTGAAAGGTACCCAAGTGGCCTGAAACAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR CAA 90 bp GCAGCCAACAGCCACGACATTCAGCAATCTCAGTGTGACAAACAACACATCTGTGCCCCAAACTTCTCATaGCAGAGGCTGCACACTAGC +
Preference number: 5 (lower is better)
Translates to: AANSHDIQQSQCDKQHICAPNFS*QRLHTS
Trigger: GCTAGTGTGCAGCCTCTGCAATGAGAAGTTTGGGGC...ACAGATGTGTTGTTTGTCACACTGAGATTGCTGAATGTCGTGGCTGTTGGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR CAA 90 bp TCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATAGGGGCTTGTTGAAGTaGACCTTCCTCTTCAACTTC +
Preference number: 5 (lower is better)
Translates to: SELSSSKPNDEPKGLPHHRGLLK*TFLFNF
Trigger: GAAGTTGAAGAGGAAGGTCAACTTCAACAAGCCCCT...ATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp TCCCCTGTGAATTACCCAAGAAACAAAGTGGGGGCCAGTGAGCAGCCGTGCTTAAGGGGCTTGTTGAAGTaGACCTTCCTCTTCAACTTC +
Preference number: 5 (lower is better)
Translates to: SPVNYPRNKVGASEQPCLRGLLK*TFLFNF
Trigger: GAAGTTGAAGAGGAAGGTCAACTTCAACAAGCCCCT...TAAGCACGGCTGCTCACTGGCCCCCACTTTGTTTCTTGGGTAATTCACAGGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR CAA 90 bp AGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTCTAGGGGCTTGTTGAAGTaGACCTTCCTCTTCAACTTC +
Preference number: 5 (lower is better)
Translates to: SSPLANPMTSPKGFRIISRGLLK*TFLFNF
Trigger: GAAGTTGAAGAGGAAGGTCAACTTCAACAAGCCCCT...AGAGATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp TCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTCTGTTGTGATCAGGGGCTTGTaGAAGTTGACCTTCCTCTTC +
Preference number: 5 (lower is better)
Translates to: SPLANPMTSPKGFRIISVVIRGL*KLTFLF
Trigger: GAAGAGGAAGGTCAACTTCAACAAGCCCCTGATCAC...AACAGAGATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp GCCAACAGCCACGACATTCAGCAATCTCAGTGTGACAAACAACACATCTGTAGCGGGGTGATCAGGGGCTaGTTGAAGTTGACCTTCCTC +
Preference number: 5 (lower is better)
Translates to: ANSHDIQQSQCDKQHICSGVIRG*LKLTFL
Trigger: GAGGAAGGTCAACTTCAACAAGCCCCTGATCACCCC...GCTACAGATGTGTTGTTTGTCACACTGAGATTGCTGAATGTCGTGGCTGTTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR CAA 90 bp CCAACAGCCACGACATTCAGCAATCTCAGTGTGACAAACAACACATCTGTAGCGGGGGTGATCAGGGGCTaGTTGAAGTTGACCTTCCTC +
Preference number: 5 (lower is better)
Translates to: PTATTFSNLSVTNNTSVAGVIRG*LKLTFL
Trigger: GAGGAAGGTCAACTTCAACAAGCCCCTGATCACCCC...CGCTACAGATGTGTTGTTTGTCACACTGAGATTGCTGAATGTCGTGGCTGTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR CAA 90 bp GAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTCTCCCGCTTGGCTAGATaGTCCTCTTCATCTTTCTTT +
Preference number: 5 (lower is better)
Translates to: ELSSSKPNDEPKGLPHHLSRLAR*SSSSFF
Trigger: AAAGAAAGATGAAGAGGACAATCTAGCCAAGCGGGA...GAGATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp CAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCATCTGTTCCTGGACTTaGCACACAGACCGTTTAATC +
Preference number: 5 (lower is better)
Translates to: QSSPLANPMTSPKGFRIIICSWT*HTDRLI
Trigger: GATTAAACGGTCTGTGTGCAAAGTCCAGGAACAGAT...GATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp CATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTGTTCCTGGACTTaGCACACAGACCGTTTAATC +
Preference number: 5 (lower is better)
Translates to: HQSSPLANPMTSPKGFRIICSWT*HTDRLI
Trigger: GATTAAACGGTCTGTGTGCAAAGTCCAGGAACAGAT...GATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp AATCCCAAGCTGGCTCAAGAGCCAGTGGTTAGGGAAGAAGAAGGTCAAGTGGACTTGATTAGGGAGCCATaGCACTTGGGCACTATCTCC +
Preference number: 5 (lower is better)
Translates to: NPKLAQEPVVREEEGQVDLIREP*HLGTIS
Trigger: GGAGATAGTGCCCAAGTGCAATGGCTCCCTAATCAA...GTCCACTTGACCTTCTTCTTCCCTAACCACTGGCTCTTGAGCCAGCTTGGGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp CTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTCTGTTCCGCATCATCTCTGTaGCATCAAGAAGCCAAGATG +
Preference number: 5 (lower is better)
Translates to: LSSSKPNDEPKGLPHHLCSASSL*HQEAKM
Trigger: CATCTTGGCTTCTTGATGCAACAGAGATGATGCGGA...ACAGAGATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp TCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATTCCGCATCATCTCTGTaGCATCAAGAAGCCAAGATG +
Preference number: 5 (lower is better)
Translates to: SELSSSKPNDEPKGLPHHSASSL*HQEAKM
Trigger: CATCTTGGCTTCTTGATGCAACAGAGATGATGCGGA...ATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp GAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTCCAGGTAACCATGAGTTaGTGCTTTGGGAAGAATGCA +
Preference number: 5 (lower is better)
Translates to: ELSSSKPNDEPKGLPHHLQVTMS*CFGKNA
Trigger: TGCATTCTTCCCAAAGCACAAACTCATGGTTACCTG...GAGATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp TGTACTATTGGAAGCCAGATGGCCAGGTATTGGCAATGGCCAGGGAAATCCCAAGTAGCCACTGTACTATaGGAAGCCAGATGGCCAGGT +
Preference number: 5 (lower is better)
Translates to: CTIGSQMARYWQWPGKSQVATVL*EARWPG
Trigger: ACCTGGCCATCTGGCTTCCAATAGTACAGTGGCTAC...TTGGGATTTCCCTGGCCATTGCCAATACCTGGCCATCTGGCTTCCAATAGTACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp AGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTCTCTGGAAGTTCTTCGCTaGAACTTGAGTAGCCACTGT +
Preference number: 5 (lower is better)
Translates to: SSPLANPMTSPKGFRIISLEVLR*NLSSHC
Trigger: ACAGTGGCTACTCAAGTTCAAGCGAAGAACTTCCAG...AGAGATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp TTCATTGGTCAGTTCCAGCCATGCAGCATCCATGTCATTGAGGTCATAGCGACAGTTGACAGGCTGCCATaGTCGTCAGAATCCTCACTG +
Preference number: 5 (lower is better)
Translates to: FIGQFQPCSIHVIEVIATVDRLP*SSESSL
Trigger: CAGTGAGGATTCTGACGACAATGGCAGCCTGTCAAC...TGTCGCTATGACCTCAATGACATGGATGCTGCATGGCTGGAACTGACCAATGAA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511925.5
CDS-3UTR CAA 90 bp GACAGTACTGGGAATTCCCCTGTGAATTACCCAAGAAACAAAGTGGGGGCCAGTGACACGATGTACTTCTaGGGCCTGATGAACATGAGG +
Preference number: 5 (lower is better)
Translates to: DSTGNSPVNYPRNKVGASDTMYF*GLMNMR
Trigger: CCTCATGTTCATCAGGCCCAAGAAGTACATCGTGTC...ACTGGCCCCCACTTTGTTTCTTGGGTAATTCACAGGGGAATTCCCAGTACTGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR CAA 90 bp GAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTCTCCTTAAATTCTTCATaGGTCAGTTCCAGCCATGCA +
Preference number: 5 (lower is better)
Translates to: ELSSSKPNDEPKGLPHHLSLNSS*VSSSHA
Trigger: TGCATGGCTGGAACTGACCAATGAAGAATTTAAGGA...GAGATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp AGTCACCAGAGTCTGGAAGTTCTTCGCTTGAACTTGAGTAGCCACTGTACTATTGACACAGCAGACATTTaGGCTGAACCCCCAGGGCAC +
Preference number: 5 (lower is better)
Translates to: SHQSLEVLRLNLSSHCTIDTADI*AEPPGH
Trigger: GTGCCCTGGGGGTTCAGCCAAAATGTCTGCTGTGTC...AATAGTACAGTGGCTACTCAAGTTCAAGCGAAGAACTTCCAGACTCTGGTGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp ATTTTTAACCAACACAACCTCATGCTGTGGTGTGTACAAGGGTCTGAGAGTATATCCTGTGCAGCCCCCTaGCCAAGACTCTCCTCGGGT +
Preference number: 5 (lower is better)
Translates to: IFNQHNLMLWCVQGSESISCAAP*PRLSSG
Trigger: ACCCGAGGAGAGTCTTGGCAAGGGGGCTGCACAGGA...TATACTCTCAGACCCTTGTACACACCACAGCATGAGGTTGTGTTGGTTAAAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR CAA 90 bp GCAGCCAACAGCCACGACATTCAGCAATCTCAGTGTGACAAACAACACATCTGTACATCCTGCTCCCGCTaGGCTAGATTGTCCTCTTCA +
Preference number: 5 (lower is better)
Translates to: AANSHDIQQSQCDKQHICTSCSR*ARLSSS
Trigger: TGAAGAGGACAATCTAGCCAAGCGGGAGCAGGATGT...ACAGATGTGTTGTTTGTCACACTGAGATTGCTGAATGTCGTGGCTGTTGGCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR CAA 90 bp CCACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCCAAGGAAGTACCCATTaGTTTTCTGAAGAATGCAGA +
Preference number: 5 (lower is better)
Translates to: PHQSSPLANPMTSPKGFRQGSTH*FSEECR
Trigger: TCTGCATTCTTCAGAAAACAAATGGGTACTTCCTTG...GCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp TCTCCCCCACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCCAAGGAAGTACCCATTaGTTTTCTGAAGAATGCAGA +
Preference number: 5 (lower is better)
Translates to: SPPHQSSPLANPMTSPKGQGSTH*FSEECR
Trigger: TCTGCATTCTTCAGAAAACAAATGGGTACTTCCTTG...GCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGTGGGGGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp ACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCAGGTAACCATGAGTTaGTGCTTTGGGAAGAATGCA +
Preference number: 5 (lower is better)
Translates to: TSELSSSKPNDEPKGLPHQVTMS*CFGKNA
Trigger: TGCATTCTTCCCAAAGCACAAACTCATGGTTACCTG...ATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp AGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTCTCAGGTAACCATGAGTTaGTGCTTTGGGAAGAATGCA +
Preference number: 5 (lower is better)
Translates to: SSPLANPMTSPKGFRIISQVTMS*CFGKNA
Trigger: TGCATTCTTCCCAAAGCACAAACTCATGGTTACCTG...AGAGATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp CTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTCTGTTCAAGCAGCAGGACCTaGCCATATTACCCTAAATCT +
Preference number: 5 (lower is better)
Translates to: LSSSKPNDEPKGLPHHLCSSSRT*PYYPKS
Trigger: AGATTTAGGGTAATATGGCAAGGTCCTGCTGCTTGA...ACAGAGATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp TCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATTCAAGCAGCAGGACCTaGCCATATTACCCTAAATCT +
Preference number: 5 (lower is better)
Translates to: SELSSSKPNDEPKGLPHHSSSRT*PYYPKS
Trigger: AGATTTAGGGTAATATGGCAAGGTCCTGCTGCTTGA...ATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp CATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCGTTCTTCGCTTGAACTaGAGTAGCCACTGTACTATT +
Preference number: 5 (lower is better)
Translates to: HQSSPLANPMTSPKGFRIVLRLN*SSHCTI
Trigger: AATAGTACAGTGGCTACTCAAGTTCAAGCGAAGAAC...GATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp GACAGTACTGGGAATTCCCCTGTGAATTACCCAAGAAACAAAGTGGGGGCCAGTACTGTTTCAGGCCACTaGGGTACCTTTCAGTGCAGA +
Preference number: 5 (lower is better)
Translates to: DSTGNSPVNYPRNKVGASTVSGH*GTFQCR
Trigger: TCTGCACTGAAAGGTACCCAAGTGGCCTGAAACAGT...ACTGGCCCCCACTTTGTTTCTTGGGTAATTCACAGGGGAATTCCCAGTACTGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR CAA 90 bp GACTCCATAGCTCATGCACCCCAATTACAGCAGGTGTCGGGCTGGCATAAAGGCCATACATCGTTGGCATaGTTCTACTTAAACAGCGAC +
Preference number: 5 (lower is better)
Translates to: DSIAHAPQLQQVSGWHKGHTSLA*FYLNSD
Trigger: GTCGCTGTTTAAGTAGAACAATGCCAACGATGTATG...GCCTTTATGCCAGCCCGACACCTGCTGTAATTGGGGTGCATGAGCTATGGAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR CAA 90 bp GCAGCCAACAGCCACGACATTCAGCAATCTCAGTGTGACAAACAACACATCTGTGACACGATGTACTTCTaGGGCCTGATGAACATGAGG +
Preference number: 5 (lower is better)
Translates to: AANSHDIQQSQCDKQHICDTMYF*GLMNMR
Trigger: CCTCATGTTCATCAGGCCCAAGAAGTACATCGTGTC...ACAGATGTGTTGTTTGTCACACTGAGATTGCTGAATGTCGTGGCTGTTGGCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR CAA 90 bp GTGTCGGGCTGGCATAAAGGCTTCTTACCAGGATTCCAGTTTATCCTTCTCAATCAGAACACCATCTCATaGCCGTCCTCACCATCAGGA +
Preference number: 5 (lower is better)
Translates to: VSGWHKGFLPGFQFILLNQNTIS*PSSPSG
Trigger: TCCTGATGGTGAGGACGGCAATGAGATGGTGTTCTG...ATTGAGAAGGATAAACTGGAATCCTGGTAAGAAGCCTTTATGCCAGCCCGACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR CAA 90 bp TCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTCTGTTTCCCGCTTGGCTAGATaGTCCTCTTCATCTTTCTTT +
Preference number: 5 (lower is better)
Translates to: SPLANPMTSPKGFRIISVSRLAR*SSSSFF
Trigger: AAAGAAAGATGAAGAGGACAATCTAGCCAAGCGGGA...AACAGAGATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp TGTACTATTGGAAGCCAGATGGCCAGGTATTGGCAATGGCCAGGGAAATCCCAATCCGCATCATCTCTGTaGCATCAAGAAGCCAAGATG +
Preference number: 5 (lower is better)
Translates to: CTIGSQMARYWQWPGKSQSASSL*HQEAKM
Trigger: CATCTTGGCTTCTTGATGCAACAGAGATGATGCGGA...TTGGGATTTCCCTGGCCATTGCCAATACCTGGCCATCTGGCTTCCAATAGTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp CCACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCCTTTCCTGTATAACCTaGGTCAATAGTAAGAGCTTA +
Preference number: 5 (lower is better)
Translates to: PHQSSPLANPMTSPKGFRLSCIT*VNSKSL
Trigger: TAAGCTCTTACTATTGACCAAGGTTATACAGGAAAG...GCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp CCCACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGGTTCCTTCCTTAAGTTaGATTCACAACCACATTGAA +
Preference number: 5 (lower is better)
Translates to: PTSELSSSKPNDEPKGLPVPSLS*IHNHIE
Trigger: TTCAATGTGGTTGTGAATCAAACTTAAGGAAGGAAC...CGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp TCTCCCCCACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCGTTCCTTCCTTAAGTTaGATTCACAACCACATTGAA +
Preference number: 5 (lower is better)
Translates to: SPPHQSSPLANPMTSPKGVPSLS*IHNHIE
Trigger: TTCAATGTGGTTGTGAATCAAACTTAAGGAAGGAAC...GCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGTGGGGGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp CCCCCACATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCAATCATCTGGAAGACTaGAAAGTTAACTGCAGAACT +
Preference number: 5 (lower is better)
Translates to: PPHQSSPLANPMTSPKGFNHLED*KVNCRT
Trigger: AGTTCTGCAGTTAACTTTCAAGTCTTCCAGATGATT...GAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATGTGGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp TCAACTCCTTGGGTCATTTTCTTGGGGCTCATTCACTCTAGCTCTAGAATGAAGACTGGCTATCATTTCTaGCTCTGGGCGAGCGTTCGC +
Preference number: 5 (lower is better)
Translates to: STPWVIFLGLIHSSSRMKTGYHF*LWASVR
Trigger: GCGAACGCTCGCCCAGAGCAAGAAATGATAGCCAGT...CTTCATTCTAGAGCTAGAGTGAATGAGCCCCAAGAAAATGACCCAAGGAGTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR CAA 90 bp GGCCACTTGGGTACCTTTCAGTGCAGACTGCTTCAGGCCAGAAAACCTCACTCCCACTCAGTAGCAGTTTaGCACATATGTACAATGAGT +
Preference number: 5 (lower is better)
Translates to: GHLGTFQCRLLQARKPHSHSVAV*HICTMS
Trigger: ACTCATTGTACATATGTGCAAAACTGCTACTGAGTG...GGAGTGAGGTTTTCTGGCCTGAAGCAGTCTGCACTGAAAGGTACCCAAGTGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR CAA 90 bp ACTGTTTCAGGCCACTTGGGTACCTTTCAGTGCAGACTGCTTCAGGCCAGAAAACAAACAATAGACTTCTaGTCCTCCCCCTCCCAACAA +
Preference number: 5 (lower is better)
Translates to: TVSGHLGTFQCRLLQARKQTIDF*SSPSQQ
Trigger: TTGTTGGGAGGGGGAGGACAAGAAGTCTATTGTTTG...TTTTCTGGCCTGAAGCAGTCTGCACTGAAAGGTACCCAAGTGGCCTGAAACAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR CAA 90 bp AATCCCAAGCTGGCTCAAGAGCCAGTGGTTAGGGAAGAAGAAGGTCAAGTGGACTCCTTAAATTCTTCATaGGTCAGTTCCAGCCATGCA +
Preference number: 5 (lower is better)
Translates to: NPKLAQEPVVREEEGQVDSLNSS*VSSSHA
Trigger: TGCATGGCTGGAACTGACCAATGAAGAATTTAAGGA...GTCCACTTGACCTTCTTCTTCCCTAACCACTGGCTCTTGAGCCAGCTTGGGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp CAGTGGTTAGGGAAGAAGAAGGTCAAGTGGACTGGTAAAAATTCTACTTCAACTGGGAGGTGGCAGCTCTaGTGTTGTCCAGATGCCTCT +
Preference number: 5 (lower is better)
Translates to: QWLGKKKVKWTGKNSTSTGRWQL*CCPDAS
Trigger: AGAGGCATCTGGACAACACAAGAGCTGCCACCTCCC...AGTTGAAGTAGAATTTTTACCAGTCCACTTGACCTTCTTCTTCCCTAACCACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp CATCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCCTTTCCTGTATAACCTaGGTCAATAGTAAGAGCTTA +
Preference number: 5 (lower is better)
Translates to: HQSSPLANPMTSPKGFRILSCIT*VNSKSL
Trigger: TAAGCTCTTACTATTGACCAAGGTTATACAGGAAAG...GATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp GAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTCAATCATCTGGAAGACTaGAAAGTTAACTGCAGAACT +
Preference number: 5 (lower is better)
Translates to: ELSSSKPNDEPKGLPHHLNHLED*KVNCRT
Trigger: AGTTCTGCAGTTAACTTTCAAGTCTTCCAGATGATT...GAGATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp GAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTCGGTAAGGCATTATTTTaGCACAAAACTAGCATTCCT +
Preference number: 5 (lower is better)
Translates to: ELSSSKPNDEPKGLPHHLGKALF*HKTSIP
Trigger: AGGAATGCTAGTTTTGTGCAAAAATAATGCCTTACC...GAGATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp CAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCGGTAAGGCATTATTTTaGCACAAAACTAGCATTCCT +
Preference number: 5 (lower is better)
Translates to: QSSPLANPMTSPKGFRIIGKALF*HKTSIP
Trigger: AGGAATGCTAGTTTTGTGCAAAAATAATGCCTTACC...GATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp GGCCACTTGGGTACCTTTCAGTGCAGACTGCTTCAGGCCAGAAAACCTCACTCCGAAGACACACCCCATTaGATCTTACAAAACAGTAAA +
Preference number: 5 (lower is better)
Translates to: GHLGTFQCRLLQARKPHSEDTPH*ILQNSK
Trigger: TTTACTGTTTTGTAAGATCAAATGGGGTGTGTCTTC...GGAGTGAGGTTTTCTGGCCTGAAGCAGTCTGCACTGAAAGGTACCCAAGTGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR CAA 90 bp GTGTCGGGCTGGCATAAAGGCTTCTTACCAGGATTCCAGTTTATCCTTCTCAATCCTTGGGTCATTTTCTaGGGGCTCATTCACTCTAGC +
Preference number: 5 (lower is better)
Translates to: VSGWHKGFLPGFQFILLNPWVIF*GLIHSS
Trigger: GCTAGAGTGAATGAGCCCCAAGAAAATGACCCAAGG...ATTGAGAAGGATAAACTGGAATCCTGGTAAGAAGCCTTTATGCCAGCCCGACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR CAA 90 bp AAGGAAATGCCAGCAGCTGAGGCTCGGCAGCCAACAGCCACGACATTCAGCAATGTTTCTCATACATCGTaGGCATTGTTCTACTTAAAC +
Preference number: 5 (lower is better)
Translates to: KEMPAAEARQPTATTFSNVSHTS*ALFYLN
Trigger: GTTTAAGTAGAACAATGCCAACGATGTATGAGAAAC...ATTGCTGAATGTCGTGGCTGTTGGCTGCCGAGCCTCAGCTGCTGGCATTTCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR CAA 90 bp TTCTCATCTCTAACAAAAATGCCACACATACATGTAGTTGTGAGAGGCAAAGTCGACACAGCAGACATTTaGGCTGAACCCCCAGGGCAC +
Preference number: 5 (lower is better)
Translates to: FSSLTKMPHIHVVVRGKVDTADI*AEPPGH
Trigger: GTGCCCTGGGGGTTCAGCCAAAATGTCTGCTGTGTC...GACTTTGCCTCTCACAACTACATGTATGTGTGGCATTTTTGTTAGAGATGAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR CAA 90 bp GCAGCCAACAGCCACGACATTCAGCAATCTCAGTGTGACAAACAACACATCTGTTCCCGCTTGGCTAGATaGTCCTCTTCATCTTTCTTT +
Preference number: 5 (lower is better)
Translates to: AANSHDIQQSQCDKQHICSRLAR*SSSSFF
Trigger: AAAGAAAGATGAAGAGGACAATCTAGCCAAGCGGGA...ACAGATGTGTTGTTTGTCACACTGAGATTGCTGAATGTCGTGGCTGTTGGCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR CAA 90 bp TCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTCTGTTCAAGGAAGTACCCATTaGTTTTCTGAAGAATGCAGA +
Preference number: 5 (lower is better)
Translates to: SPLANPMTSPKGFRIISVQGSTH*FSEECR
Trigger: TCTGCATTCTTCAGAAAACAAATGGGTACTTCCTTG...AACAGAGATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp TGTACTATTGGAAGCCAGATGGCCAGGTATTGGCAATGGCCAGGGAAATCCCAAGTTCTTCGCTTGAACTaGAGTAGCCACTGTACTATT +
Preference number: 5 (lower is better)
Translates to: CTIGSQMARYWQWPGKSQVLRLN*SSHCTI
Trigger: AATAGTACAGTGGCTACTCAAGTTCAAGCGAAGAAC...TTGGGATTTCCCTGGCCATTGCCAATACCTGGCCATCTGGCTTCCAATAGTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp TCAGAGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTTTCCTGTATAACCTaGGTCAATAGTAAGAGCTTA +
Preference number: 5 (lower is better)
Translates to: SELSSSKPNDEPKGLPHHLSCIT*VNSKSL
Trigger: TAAGCTCTTACTATTGACCAAGGTTATACAGGAAAG...ATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCTCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp CTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTCTGTCTTTCCTGTATAACCTaGGTCAATAGTAAGAGCTTA +
Preference number: 5 (lower is better)
Translates to: LSSSKPNDEPKGLPHHLCLSCIT*VNSKSL
Trigger: TAAGCTCTTACTATTGACCAAGGTTATACAGGAAAG...ACAGAGATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp AGCTCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTCTGTTCCTTCCTTAAGTTaGATTCACAACCACATTGAA +
Preference number: 5 (lower is better)
Translates to: SSPLANPMTSPKGFRIISVPSLS*IHNHIE
Trigger: TTCAATGTGGTTGTGAATCAAACTTAAGGAAGGAAC...AGAGATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp TTCATTGGTCAGTTCCAGCCATGCAGCATCCATGTCATTGAGGTCATAGCGACATCCTTAAATTCTTCATaGGTCAGTTCCAGCCATGCA +
Preference number: 5 (lower is better)
Translates to: FIGQFQPCSIHVIEVIATSLNSS*VSSSHA
Trigger: TGCATGGCTGGAACTGACCAATGAAGAATTTAAGGA...TGTCGCTATGACCTCAATGACATGGATGCTGCATGGCTGGAACTGACCAATGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511925.5
CDS-3UTR CAA 90 bp TCTAGTCTTAGCAGTGTCTTATGGTTACAATCTACTCTTCTGTTTCCTCAACAAGCACTATCTCCTTCCTaGTGCCAGGTGCTGACTGCC +
Preference number: 5 (lower is better)
Translates to: SSLSSVLWLQSTLLFPQQALSPS*CQVLTA
Trigger: GGCAGTCAGCACCTGGCACAAGGAAGGAGATAGTGC...TTGTTGAGGAAACAGAAGAGTAGATTGTAACCATAAGACACTGCTAAGACTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp AGTCACCAGAGTCTGGAAGTTCTTCGCTTGAACTTGAGTAGCCACTGTACTATTCTGGAAGTTCTTCGCTaGAACTTGAGTAGCCACTGT +
Preference number: 5 (lower is better)
Translates to: SHQSLEVLRLNLSSHCTILEVLR*NLSSHC
Trigger: ACAGTGGCTACTCAAGTTCAAGCGAAGAACTTCCAG...AATAGTACAGTGGCTACTCAAGTTCAAGCGAAGAACTTCCAGACTCTGGTGACT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp TCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTCTGTTGTTCCTTCCTTAAGTTaGATTCACAACCACATTGAA +
Preference number: 5 (lower is better)
Translates to: SPLANPMTSPKGFRIISVVPSLS*IHNHIE
Trigger: TTCAATGTGGTTGTGAATCAAACTTAAGGAAGGAAC...AACAGAGATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp TCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTCTGTTAATCATCTGGAAGACTaGAAAGTTAACTGCAGAACT +
Preference number: 5 (lower is better)
Translates to: SPLANPMTSPKGFRIISVNHLED*KVNCRT
Trigger: AGTTCTGCAGTTAACTTTCAAGTCTTCCAGATGATT...AACAGAGATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp TCTCCTCTAGCAAACCCAATGACGAGCCCAAAGGGCTTCCGCATCATCTCTGTTGGTAAGGCATTATTTTaGCACAAAACTAGCATTCCT +
Preference number: 5 (lower is better)
Translates to: SPLANPMTSPKGFRIISVGKALF*HKTSIP
Trigger: AGGAATGCTAGTTTTGTGCAAAAATAATGCCTTACC...AACAGAGATGATGCGGAAGCCCTTTGGGCTCGTCATTGGGTTTGCTAGAGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp CAGTGGTTAGGGAAGAAGAAGGTCAAGTGGACTGGTAAAAATTCTACTTCAACTTTCAAGTCCTCTATCTaGGGAGCATCAGGGCCAACA +
Preference number: 5 (lower is better)
Translates to: QWLGKKKVKWTGKNSTSTFKSSI*GASGPT
Trigger: TGTTGGCCCTGATGCTCCCAAGATAGAGGACTTGAA...AGTTGAAGTAGAATTTTTACCAGTCCACTTGACCTTCTTCTTCCCTAACCACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp ACACTTCAGTCTCTTTCCTGTATAACCTTGGTCAATAGTAAGAGCTTATCGCAATGCTTCAGCAGGGTTTaGCCTTCACTTCCAGGGCTA +
Preference number: 5 (lower is better)
Translates to: TLQSLSCITLVNSKSLSQCFSRV*PSLPGL
Trigger: TAGCCCTGGAAGTGAAGGCAAAACCCTGCTGAAGCA...TTGCGATAAGCTCTTACTATTGACCAAGGTTATACAGGAAAGAGACTGAAGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp TCTAGTCTTAGCAGTGTCTTATGGTTACAATCTACTCTTCTGTTTCCTCAACAACCAGATGGCCAGGTATaGGCAATGGCCAGGGAAATC +
Preference number: 5 (lower is better)
Translates to: SSLSSVLWLQSTLLFPQQPDGQV*AMAREI
Trigger: GATTTCCCTGGCCATTGCCAATACCTGGCCATCTGG...TTGTTGAGGAAACAGAAGAGTAGATTGTAACCATAAGACACTGCTAAGACTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS TCA 90 bp TTGTCCAGATGCCTCTGGGACACATCTGTGGACCTGAGAGGCTTGTaGCTCTGTTTAAAAGATTTGTCCTTTAAGTCTCCTTTAATGAGA +
Preference number: 5 (lower is better)
Translates to: LSRCLWDTSVDLRGL*LCLKDLSFKSPLMR
Trigger: TCTCATTAAAGGAGACTTAAAGGACAAATCTTTTAAACAGAGTCACAAGCCTCTCAGGTCCACAGATGTGTCCCAGAGGCATCTGGACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp TCTAGTCTTAGCAGTGTCTTATGGTTACAATCTACTCTTCTGTTTCCTCAACAACAGAACACCATCTCATaGCCGTCCTCACCATCAGGA +
Preference number: 5 (lower is better)
Translates to: SSLSSVLWLQSTLLFPQQQNTIS*PSSPSG
Trigger: TCCTGATGGTGAGGACGGCAATGAGATGGTGTTCTG...TTGTTGAGGAAACAGAAGAGTAGATTGTAACCATAAGACACTGCTAAGACTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp TTCCTAATAGTGCAAATGAATCTGATACCTCTTAAAATGGTGAGAGGTCATACAGCCCCAAACTTCTCATaGCAGAGGCTGCACACTAGC +
Preference number: 5 (lower is better)
Translates to: FLIVQMNLIPLKMVRGHTAPNFS*QRLHTS
Trigger: GCTAGTGTGCAGCCTCTGCAATGAGAAGTTTGGGGC...TGTATGACCTCTCACCATTTTAAGAGGTATCAGATTCATTTGCACTATTAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp ATAGTGCAAATGAATCTGATACCTCTTAAAATGGTGAGAGGTCATACACTTACTGCCCCAAACTTCTCATaGCAGAGGCTGCACACTAGC +
Preference number: 5 (lower is better)
Translates to: IVQMNLIPLKMVRGHTLTAPNFS*QRLHTS
Trigger: GCTAGTGTGCAGCCTCTGCAATGAGAAGTTTGGGGC...AGTAAGTGTATGACCTCTCACCATTTTAAGAGGTATCAGATTCATTTGCACTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp TTCCTAATAGTGCAAATGAATCTGATACCTCTTAAAATGGTGAGAGGTCATACAGGGGTGATCAGGGGCTaGTTGAAGTTGACCTTCCTC +
Preference number: 5 (lower is better)
Translates to: FLIVQMNLIPLKMVRGHTGVIRG*LKLTFL
Trigger: GAGGAAGGTCAACTTCAACAAGCCCCTGATCACCCC...TGTATGACCTCTCACCATTTTAAGAGGTATCAGATTCATTTGCACTATTAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp ACACTTCAGTCTCTTTCCTGTATAACCTTGGTCAATAGTAAGAGCTTATCGCAATTCAAGTCCTCTATCTaGGGAGCATCAGGGCCAACA +
Preference number: 5 (lower is better)
Translates to: TLQSLSCITLVNSKSLSQFKSSI*GASGPT
Trigger: TGTTGGCCCTGATGCTCCCAAGATAGAGGACTTGAA...TTGCGATAAGCTCTTACTATTGACCAAGGTTATACAGGAAAGAGACTGAAGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp TCTAGTCTTAGCAGTGTCTTATGGTTACAATCTACTCTTCTGTTTCCTCAACAAAGGGAGCCATTGCACTaGGGCACTATCTCCTTCCTT +
Preference number: 5 (lower is better)
Translates to: SSLSSVLWLQSTLLFPQQREPLH*GTISFL
Trigger: AAGGAAGGAGATAGTGCCCAAGTGCAATGGCTCCCT...TTGTTGAGGAAACAGAAGAGTAGATTGTAACCATAAGACACTGCTAAGACTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp TTCCTAATAGTGCAAATGAATCTGATACCTCTTAAAATGGTGAGAGGTCATACACCAGATGGCCAGGTATaGGCAATGGCCAGGGAAATC +
Preference number: 5 (lower is better)
Translates to: FLIVQMNLIPLKMVRGHTPDGQV*AMAREI
Trigger: GATTTCCCTGGCCATTGCCAATACCTGGCCATCTGG...TGTATGACCTCTCACCATTTTAAGAGGTATCAGATTCATTTGCACTATTAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp AGTCACCAGAGTCTGGAAGTTCTTCGCTTGAACTTGAGTAGCCACTGTACTATTGTTCTTCGCTTGAACTaGAGTAGCCACTGTACTATT +
Preference number: 5 (lower is better)
Translates to: SHQSLEVLRLNLSSHCTIVLRLN*SSHCTI
Trigger: AATAGTACAGTGGCTACTCAAGTTCAAGCGAAGAAC...AATAGTACAGTGGCTACTCAAGTTCAAGCGAAGAACTTCCAGACTCTGGTGACT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp GCCAACAGCCACGACATTCAGCAATCTCAGTGTGACAAACAACACATCTGTAGCGAAGACACACCCCATTaGATCTTACAAAACAGTAAA +
Preference number: 5 (lower is better)
Translates to: ANSHDIQQSQCDKQHICSEDTPH*ILQNSK
Trigger: TTTACTGTTTTGTAAGATCAAATGGGGTGTGTCTTC...GCTACAGATGTGTTGTTTGTCACACTGAGATTGCTGAATGTCGTGGCTGTTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR CAA 90 bp CCAACAGCCACGACATTCAGCAATCTCAGTGTGACAAACAACACATCTGTAGCGGTTTCTCATACATCGTaGGCATTGTTCTACTTAAAC +
Preference number: 5 (lower is better)
Translates to: PTATTFSNLSVTNNTSVAVSHTS*ALFYLN
Trigger: GTTTAAGTAGAACAATGCCAACGATGTATGAGAAAC...CGCTACAGATGTGTTGTTTGTCACACTGAGATTGCTGAATGTCGTGGCTGTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR CAA 90 bp CAGTGGTTAGGGAAGAAGAAGGTCAAGTGGACTGGTAAAAATTCTACTTCAACTTCCCGCTTGGCTAGATaGTCCTCTTCATCTTTCTTT +
Preference number: 5 (lower is better)
Translates to: QWLGKKKVKWTGKNSTSTSRLAR*SSSSFF
Trigger: AAAGAAAGATGAAGAGGACAATCTAGCCAAGCGGGA...AGTTGAAGTAGAATTTTTACCAGTCCACTTGACCTTCTTCTTCCCTAACCACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp TTCAGTTCGGGTTCTAGTCTTAGCAGTGTCTTATGGTTACAATCTACTCTTCTGATCTGTTCCTGGACTTaGCACACAGACCGTTTAATC +
Preference number: 5 (lower is better)
Translates to: FSSGSSLSSVLWLQSTLLICSWT*HTDRLI
Trigger: GATTAAACGGTCTGTGTGCAAAGTCCAGGAACAGAT...CAGAAGAGTAGATTGTAACCATAAGACACTGCTAAGACTAGAACCCGAACTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp TCTAGTCTTAGCAGTGTCTTATGGTTACAATCTACTCTTCTGTTTCCTCAACAATTCAAGTCCTCTATCTaGGGAGCATCAGGGCCAACA +
Preference number: 5 (lower is better)
Translates to: SSLSSVLWLQSTLLFPQQFKSSI*GASGPT
Trigger: TGTTGGCCCTGATGCTCCCAAGATAGAGGACTTGAA...TTGTTGAGGAAACAGAAGAGTAGATTGTAACCATAAGACACTGCTAAGACTAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp TTCCTAATAGTGCAAATGAATCTGATACCTCTTAAAATGGTGAGAGGTCATACATGCTTCAGCAGGGTTTaGCCTTCACTTCCAGGGCTA +
Preference number: 5 (lower is better)
Translates to: FLIVQMNLIPLKMVRGHTCFSRV*PSLPGL
Trigger: TAGCCCTGGAAGTGAAGGCAAAACCCTGCTGAAGCA...TGTATGACCTCTCACCATTTTAAGAGGTATCAGATTCATTTGCACTATTAGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp TCTAGTCTTAGCAGTGTCTTATGGTTACAATCTACTCTTCTGTTTCCTCAACAATTGATTAGGGAGCCATaGCACTTGGGCACTATCTCC +
Preference number: 5 (lower is better)
Translates to: SSLSSVLWLQSTLLFPQQLIREP*HLGTIS
Trigger: GGAGATAGTGCCCAAGTGCAATGGCTCCCTAATCAA...TTGTTGAGGAAACAGAAGAGTAGATTGTAACCATAAGACACTGCTAAGACTAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp CAGTGGTTAGGGAAGAAGAAGGTCAAGTGGACTGGTAAAAATTCTACTTCAACTTCCTTAAATTCTTCATaGGTCAGTTCCAGCCATGCA +
Preference number: 5 (lower is better)
Translates to: QWLGKKKVKWTGKNSTSTSLNSS*VSSSHA
Trigger: TGCATGGCTGGAACTGACCAATGAAGAATTTAAGGA...AGTTGAAGTAGAATTTTTACCAGTCCACTTGACCTTCTTCTTCCCTAACCACTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp ATTTTTAACCAACACAACCTCATGCTGTGGTGTGTACAAGGGTCTGAGAGTATATCCTTAAATTCTTCATaGGTCAGTTCCAGCCATGCA +
Preference number: 5 (lower is better)
Translates to: IFNQHNLMLWCVQGSESISLNSS*VSSSHA
Trigger: TGCATGGCTGGAACTGACCAATGAAGAATTTAAGGA...TATACTCTCAGACCCTTGTACACACCACAGCATGAGGTTGTGTTGGTTAAAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR CAA 90 bp TCTAGTCTTAGCAGTGTCTTATGGTTACAATCTACTCTTCTGTTTCCTCAACAAAGGGGCTTGTTGAAGTaGACCTTCCTCTTCAACTTC +
Preference number: 5 (lower is better)
Translates to: SSLSSVLWLQSTLLFPQQRGLLK*TFLFNF
Trigger: GAAGTTGAAGAGGAAGGTCAACTTCAACAAGCCCCT...TTGTTGAGGAAACAGAAGAGTAGATTGTAACCATAAGACACTGCTAAGACTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp ACACTTCAGTCTCTTTCCTGTATAACCTTGGTCAATAGTAAGAGCTTATCGCAAATCTGTTCCTGGACTTaGCACACAGACCGTTTAATC +
Preference number: 5 (lower is better)
Translates to: TLQSLSCITLVNSKSLSQICSWT*HTDRLI
Trigger: GATTAAACGGTCTGTGTGCAAAGTCCAGGAACAGAT...TTGCGATAAGCTCTTACTATTGACCAAGGTTATACAGGAAAGAGACTGAAGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp TCTAGTCTTAGCAGTGTCTTATGGTTACAATCTACTCTTCTGTTTCCTCAACAATCCGCATCATCTCTGTaGCATCAAGAAGCCAAGATG +
Preference number: 5 (lower is better)
Translates to: SSLSSVLWLQSTLLFPQQSASSL*HQEAKM
Trigger: CATCTTGGCTTCTTGATGCAACAGAGATGATGCGGA...TTGTTGAGGAAACAGAAGAGTAGATTGTAACCATAAGACACTGCTAAGACTAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp TTCTCATCTCTAACAAAAATGCCACACATACATGTAGTTGTGAGAGGCAAAGTCTCCTTAAATTCTTCATaGGTCAGTTCCAGCCATGCA +
Preference number: 5 (lower is better)
Translates to: FSSLTKMPHIHVVVRGKVSLNSS*VSSSHA
Trigger: TGCATGGCTGGAACTGACCAATGAAGAATTTAAGGA...GACTTTGCCTCTCACAACTACATGTATGTGTGGCATTTTTGTTAGAGATGAGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR CAA 90 bp TTCAGTTCGGGTTCTAGTCTTAGCAGTGTCTTATGGTTACAATCTACTCTTCTGCAAGGAAGTACCCATTaGTTTTCTGAAGAATGCAGA +
Preference number: 5 (lower is better)
Translates to: FSSGSSLSSVLWLQSTLLQGSTH*FSEECR
Trigger: TCTGCATTCTTCAGAAAACAAATGGGTACTTCCTTG...CAGAAGAGTAGATTGTAACCATAAGACACTGCTAAGACTAGAACCCGAACTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp ATTTTTAACCAACACAACCTCATGCTGTGGTGTGTACAAGGGTCTGAGAGTATACACTCAGTAGCAGTTTaGCACATATGTACAATGAGT +
Preference number: 5 (lower is better)
Translates to: IFNQHNLMLWCVQGSESIHSVAV*HICTMS
Trigger: ACTCATTGTACATATGTGCAAAACTGCTACTGAGTG...TATACTCTCAGACCCTTGTACACACCACAGCATGAGGTTGTGTTGGTTAAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000413543.6
ENST00000511647.5
CDS-3UTR CAA 90 bp ATAGTGCAAATGAATCTGATACCTCTTAAAATGGTGAGAGGTCATACACTTACTTCCCGCTTGGCTAGATaGTCCTCTTCATCTTTCTTT +
Preference number: 5 (lower is better)
Translates to: IVQMNLIPLKMVRGHTLTSRLAR*SSSSFF
Trigger: AAAGAAAGATGAAGAGGACAATCTAGCCAAGCGGGA...AGTAAGTGTATGACCTCTCACCATTTTAAGAGGTATCAGATTCATTTGCACTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp ACACTTCAGTCTCTTTCCTGTATAACCTTGGTCAATAGTAAGAGCTTATCGCAACAAGGAAGTACCCATTaGTTTTCTGAAGAATGCAGA +
Preference number: 5 (lower is better)
Translates to: TLQSLSCITLVNSKSLSQQGSTH*FSEECR
Trigger: TCTGCATTCTTCAGAAAACAAATGGGTACTTCCTTG...TTGCGATAAGCTCTTACTATTGACCAAGGTTATACAGGAAAGAGACTGAAGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp TTCCTAATAGTGCAAATGAATCTGATACCTCTTAAAATGGTGAGAGGTCATACATCAAGCAGCAGGACCTaGCCATATTACCCTAAATCT +
Preference number: 5 (lower is better)
Translates to: FLIVQMNLIPLKMVRGHTSSSRT*PYYPKS
Trigger: AGATTTAGGGTAATATGGCAAGGTCCTGCTGCTTGA...TGTATGACCTCTCACCATTTTAAGAGGTATCAGATTCATTTGCACTATTAGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp ATTTTTAACCAACACAACCTCATGCTGTGGTGTGTACAAGGGTCTGAGAGTATAAGGCAAAGATTTCAATaGTTTAATGCCTTCACCATC +
Preference number: 5 (lower is better)
Translates to: IFNQHNLMLWCVQGSESIRQRFQ*FNAFTI
Trigger: GATGGTGAAGGCATTAAACAATTGAAATCTTTGCCT...TATACTCTCAGACCCTTGTACACACCACAGCATGAGGTTGTGTTGGTTAAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413543.6
CDS-3UTR CAA 90 bp TTCCTAATAGTGCAAATGAATCTGATACCTCTTAAAATGGTGAGAGGTCATACAGTTCTTCGCTTGAACTaGAGTAGCCACTGTACTATT +
Preference number: 5 (lower is better)
Translates to: FLIVQMNLIPLKMVRGHTVLRLN*SSHCTI
Trigger: AATAGTACAGTGGCTACTCAAGTTCAAGCGAAGAAC...TGTATGACCTCTCACCATTTTAAGAGGTATCAGATTCATTTGCACTATTAGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp ACACTTCAGTCTCTTTCCTGTATAACCTTGGTCAATAGTAAGAGCTTATCGCAAAATCATCTGGAAGACTaGAAAGTTAACTGCAGAACT +
Preference number: 5 (lower is better)
Translates to: TLQSLSCITLVNSKSLSQNHLED*KVNCRT
Trigger: AGTTCTGCAGTTAACTTTCAAGTCTTCCAGATGATT...TTGCGATAAGCTCTTACTATTGACCAAGGTTATACAGGAAAGAGACTGAAGTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS TCA 90 bp TGTTTAAAAGATTTGTCCTTTAAGTCTCCTTTAATGAGATCACAATaGAAACGATTGTCTCTTCTTTTCCCATGGTCTGGCATCACCACA +
Preference number: 5 (lower is better)
Translates to: CLKDLSFKSPLMRSQ*KRLSLLFPWSGITT
Trigger: TGTGGTGATGCCAGACCATGGGAAAAGAAGAGACAATCGTTTTCATTGTGATCTCATTAAAGGAGACTTAAAGGACAAATCTTTTAAACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS-3UTR CAA 90 bp TTCCTAATAGTGCAAATGAATCTGATACCTCTTAAAATGGTGAGAGGTCATACAGGTAAGGCATTATTTTaGCACAAAACTAGCATTCCT +
Preference number: 5 (lower is better)
Translates to: FLIVQMNLIPLKMVRGHTGKALF*HKTSIP
Trigger: AGGAATGCTAGTTTTGTGCAAAAATAATGCCTTACC...TGTATGACCTCTCACCATTTTAAGAGGTATCAGATTCATTTGCACTATTAGGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000610919.4
ENST00000611140.4
CDS CCA 72 bp CAGGCAGCCTGCTGCGGAGGGGTTCGGCCGAGGCGCTaGGCTGGGCGCCGCTCGCTCGCTCGGAGCTGCATG +
Preference number: 6 (lower is better)
Translates to: QAACCGGVRPRR*AGRRSLARSCM
Trigger: CATGCAGCTCCGAGCGAGCGAGCGGCGCCCAGCCCAGCGCCTCGGCCGAACCCCTCCGCAGCAGGCTGCCTG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226319.11
ENST00000511647.5
CDS CCA 72 bp AGCCTGCTGCGGAGGGGTTCGGCCGAGGCGCTGGGCTaGGCGCCGCTCGCTCGCTCGGAGCTGCATGAGTTC +
Preference number: 6 (lower is better)
Translates to: SLLRRGSAEALG*APLARSELHEF
Trigger: GAACTCATGCAGCTCCGAGCGAGCGAGCGGCGCCCAGCCCAGCGCCTCGGCCGAACCCCTCCGCAGCAGGCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226319.11
ENST00000511647.5
CDS GCA 72 bp AAACCATCAAATATGGCTGAGCCTCTCGGCTCGTCCTaGAGCCGCCGCCGCCGCCGCCGCCGTCGCCGCCGC +
Preference number: 6 (lower is better)
Translates to: KPSNMAEPLGSS*SRRRRRRRRRR
Trigger: GCGGCGGCGACGGCGGCGGCGGCGGCGGCGGCTGCAGGACGAGCCGAGAGGCTCAGCCATATTTGATGGTTT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503785.5
ENST00000512960.5
CDS CCA 72 bp CTATTTAAACGCCCGCGGAAGTTGAGGCACCCCCACTaGCGGGTGCCGTGCACCTGCCTCCCGCCGCCGCGC +
Preference number: 6 (lower is better)
Translates to: LFKRPRKLRHPH*RVPCTCLPPPR
Trigger: GCGCGGCGGCGGGAGGCAGGTGCACGGCACCCGCCAGTGGGGGTGCCTCAACTTCCGCGGGCGTTTAAATAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000510308.5
ENST00000511925.5
ENST00000610919.4
CDS CAA 90 bp GCCGGTGGGAGGGGAGAGAGGCTGCTATTTAAACGCCCGCGGAAGTaGAGGCACCCCCACTGGCGGGTGCCGTGCACCTGCCTCCCGCCG +
Preference number: 6 (lower is better)
Translates to: AGGRGERLLFKRPRK*RHPHWRVPCTCLPP
Trigger: CGGCGGGAGGCAGGTGCACGGCACCCGCCAGTGGGGGTGCCTCAACTTCCGCGGGCGTTTAAATAGCAGCCTCTCTCCCCTCCCACCGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000510308.5
ENST00000511925.5
ENST00000610919.4
CDS CCA 72 bp CTCCGGCCCCCGCCCCGGCAATGCCCAAGTTACTGGTaGGATAGTAACGCTGCGCTCAGCGGCTGCCTCCCT +
Preference number: 6 (lower is better)
Translates to: LRPPPRQCPSYW*DSNAALSGCLP
Trigger: AGGGAGGCAGCCGCTGAGCGCAGCGTTACTATCCCACCAGTAACTTGGGCATTGCCGGGGCGGGGGCCGGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000512960.5
ENST00000514740.1
CDS TCA 72 bp GGGGAGAGAGGCTGCTATTTAAACGCCCGCGGAAGTTaGGGCACCCCCACTGGCGGGTGCCGTGCACCTGCC +
Preference number: 6 (lower is better)
Translates to: GERGCYLNARGS*GTPTGGCRAPA
Trigger: GGCAGGTGCACGGCACCCGCCAGTGGGGGTGCCTCAACTTCCGCGGGCGTTTAAATAGCAGCCTCTCTCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000510308.5
ENST00000511925.5
ENST00000610919.4
CDS GCA 72 bp TTACGGACACTCACCCGGTGGGCCTCCTCCCGGTTCTaGTCAAGGCTGGCAAAGGGCTCCAGCGGATTCCGG +
Preference number: 6 (lower is better)
Translates to: LRTLTRWASSRF*SRLAKGSSGFR
Trigger: CCGGAATCCGCTGGAGCCCTTTGCCAGCCTTGAGCAGAACCGGGAGGAGGCCCACCGGGTGAGTGTCCGTAA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000226319.11
ENST00000413543.6
ENST00000452328.6
ENST00000511647.5
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS CAA 72 bp AGGGGAGAGAGGCTGCTATTTAAACGCCCGCGGAAGTaGAGGCACCCCCACTGGCGGGTGCCGTGCACCTGC +
Preference number: 6 (lower is better)
Translates to: RGERLLFKRPRK*RHPHWRVPCTC
Trigger: GCAGGTGCACGGCACCCGCCAGTGGGGGTGCCTCAACTTCCGCGGGCGTTTAAATAGCAGCCTCTCTCCCCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000510308.5
ENST00000511925.5
ENST00000610919.4
CDS CCA 72 bp CGATGTACTTCTTGGGCCTGGCCACAGGCTGAGGGATaGTCCCCGGGCTCACAGGCACCTGGACCCCTTTCT +
Preference number: 6 (lower is better)
Translates to: RCTSWAWPQAEG*SPGSQAPGPLS
Trigger: AGAAAGGGGTCCAGGTGCCTGTGAGCCCGGGGACCATCCCTCAGCCTGTGGCCAGGCCCAAGAAGTACATCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452328.6
CDS CAA 72 bp GTGCTGACTGCCCCACTCCAGGGGAGGTGGCAGCTCTaGTGTTGTCCAGATGCCTCTGGGACACATCTGTGG +
Preference number: 6 (lower is better)
Translates to: VLTAPLQGRWQL*CCPDASGTHLW
Trigger: CCACAGATGTGTCCCAGAGGCATCTGGACAACACAAGAGCTGCCACCTCCCCTGGAGTGGGGCAGTCAGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS GCA 72 bp AGTTACTGGTGGGATAGTAACGCTGCGCTCAGCGGCTaGCTCCCTCCCTCCTCGCTACAGATCGAGAACCCA +
Preference number: 6 (lower is better)
Translates to: SYWWDSNAALSG*LPPSSLQIENP
Trigger: TGGGTTCTCGATCTGTAGCGAGGAGGGAGGGAGGCAGCCGCTGAGCGCAGCGTTACTATCCCACCAGTAACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512960.5
ENST00000514740.1
CDS TCA 72 bp CAGGCAGCCGCAGAGCCCTGGCAACATCCAGCAGGTTaGCGAAGGTGTAGAACTCATCCTCCAACTGCTGCA +
Preference number: 6 (lower is better)
Translates to: QAAAEPWQHPAG*RRCRTHPPTAA
Trigger: TGCAGCAGTTGGAGGATGAGTTCTACACCTTCGTCAACCTGCTGGATGTTGCCAGGGCTCTGCGGCTGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000226319.11
ENST00000413543.6
ENST00000452328.6
ENST00000511647.5
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS CCA 72 bp TGGGACCACCATCCCCTCCCTTCTACCACACAGGTCTaGCTGCTTCAGCAGGGTTTTGCCTTCACTTCCAGG +
Preference number: 6 (lower is better)
Translates to: WDHHPLPSTTQV*LLQQGFAFTSR
Trigger: CCTGGAAGTGAAGGCAAAACCCTGCTGAAGCAGCCAGACCTGTGTGGTAGAAGGGAGGGGATGGTGGTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS CAA 90 bp CGGCAGTTCTTCACAGAGCACTGTATAGAGGCCCCAAACTTCTCATaGCAGAGGCTGCACACTAGCGCCCACCGGCTGCTGGGAATGTGT +
Preference number: 6 (lower is better)
Translates to: RQFFTEHCIEAPNFS*QRLHTSAHRLLGMC
Trigger: ACACATTCCCAGCAGCCGGTGGGCGCTAGTGTGCAGCCTCTGCAATGAGAAGTTTGGGGCCTCTATACAGTGCTCTGTGAAGAACTGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000226319.11
ENST00000413543.6
ENST00000452328.6
ENST00000511647.5
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS CCA 72 bp TTCATCTCCAGGCCCCGGTCAAAAGCACAGGTCACATaGAAGGCTGTGCGGCAGTTCTTCACAGAGCACTGT +
Preference number: 6 (lower is better)
Translates to: FISRPRSKAQVT*KAVRQFFTEHC
Trigger: ACAGTGCTCTGTGAAGAACTGCCGCACAGCCTTCCATGTGACCTGTGCTTTTGACCGGGGCCTGGAGATGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000226319.11
ENST00000413543.6
ENST00000452328.6
ENST00000511647.5
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS CCA 72 bp GAGCAGGAGCTTCTCCTATGCTGGGATCGGGAATTCTaGGACCAAGTAGTTGACAGGCTGCCATTGTCGTCA +
Preference number: 6 (lower is better)
Translates to: EQELLLCWDREF*DQVVDRLPLSS
Trigger: TGACGACAATGGCAGCCTGTCAACTACTTGGTCCCAGAATTCCCGATCCCAGCATAGGAGAAGCTCCTGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000226319.11
ENST00000413543.6
ENST00000452328.6
ENST00000503785.5
ENST00000504089.5
ENST00000507833.5
ENST00000508997.1
ENST00000510308.5
ENST00000511647.5
ENST00000511925.5
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS CAA 90 bp CCCTCCAAGGTCATTTTCTTGCATTTATTAGGAGAGCAGAGTAACTaGCTTCATCAGGGCTATGAACTGCTGCGGAGGGGTTCGGCCGAG +
Preference number: 6 (lower is better)
Translates to: PSKVIFLHLLGEQSN*LHQGYELLRRGSAE
Trigger: CTCGGCCGAACCCCTCCGCAGCAGTTCATAGCCCTGATGAAGCAAGTTACTCTGCTCTCCTAATAAATGCAAGAAAATGACCTTGGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504089.5
CDS CCA 72 bp CTTCTTTGGAATCCGGAATCCTCCCCAGTTTTTCACTaGGCTGGCAGGTGTTGTAGGCACTTTGACTGCAGT +
Preference number: 6 (lower is better)
Translates to: LLWNPESSPVFH*AGRCCRHFDCS
Trigger: ACTGCAGTCAAAGTGCCTACAACACCTGCCAGCCCAGTGAAAAACTGGGGAGGATTCCGGATTCCAAAGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS CCA 72 bp AGACACAACCCTCTGAAGGCTTTCGATCTTCATGTCTaGAGCAGGAGCTTCTCCTATGCTGGGATCGGGAAT +
Preference number: 6 (lower is better)
Translates to: RHNPLKAFDLHV*SRSFSYAGIGN
Trigger: ATTCCCGATCCCAGCATAGGAGAAGCTCCTGCTCCAGACATGAAGATCGAAAGCCTTCAGAGGGTTGTGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511925.5
CDS CAA 72 bp TCGGGAGGCTCAGAGCCTGATGACACGATGTACTTCTaGGGCCTGATGAACATGAGGGATTTCTCTTCAGAC +
Preference number: 6 (lower is better)
Translates to: SGGSEPDDTMYF*GLMNMRDFSSD
Trigger: GTCTGAAGAGAAATCCCTCATGTTCATCAGGCCCAAGAAGTACATCGTGTCATCAGGCTCTGAGCCTCCCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000226319.11
ENST00000413543.6
ENST00000503785.5
ENST00000504089.5
ENST00000507833.5
ENST00000510308.5
ENST00000511647.5
ENST00000511925.5
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS CAA 90 bp AGCTGCAGCCTCCTAAATAAGACATCCTGCTCCCGCTTGGCTAGATaGTCCTCTTCATCTTTCTTTGGGGTGATCAGGGGCTTGTTGAAG +
Preference number: 6 (lower is better)
Translates to: SCSLLNKTSCSRLAR*SSSSFFGVIRGLLK
Trigger: CTTCAACAAGCCCCTGATCACCCCAAAGAAAGATGAAGAGGACAATCTAGCCAAGCGGGAGCAGGATGTCTTATTTAGGAGGCTGCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000226319.11
ENST00000413543.6
ENST00000452328.6
ENST00000511647.5
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS CAA 72 bp CTCCTAAATAAGACATCCTGCTCCCGCTTGGCTAGATaGTCCTCTTCATCTTTCTTTGGGGTGATCAGGGGC +
Preference number: 6 (lower is better)
Translates to: LLNKTSCSRLAR*SSSSFFGVIRG
Trigger: GCCCCTGATCACCCCAAAGAAAGATGAAGAGGACAATCTAGCCAAGCGGGAGCAGGATGTCTTATTTAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000226319.11
ENST00000413543.6
ENST00000452328.6
ENST00000511647.5
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS TCA 72 bp TGCCTCTGGGACACATCTGTGGACCTGAGAGGCTTGTaGCTCTGTTTAAAAGATTTGTCCTTTAAGTCTCCT +
Preference number: 6 (lower is better)
Translates to: CLWDTSVDLRGL*LCLKDLSFKSP
Trigger: AGGAGACTTAAAGGACAAATCTTTTAAACAGAGTCACAAGCCTCTCAGGTCCACAGATGTGTCCCAGAGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS CAA 72 bp TTGTCCTCTTCATCTTTCTTTGGGGTGATCAGGGGCTaGTTGAAGTTGACCTTCCTCTTCAACTTCCAGTAC +
Preference number: 6 (lower is better)
Translates to: LSSSSFFGVIRG*LKLTFLFNFQY
Trigger: GTACTGGAAGTTGAAGAGGAAGGTCAACTTCAACAAGCCCCTGATCACCCCAAAGAAAGATGAAGAGGACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000226319.11
ENST00000413543.6
ENST00000452328.6
ENST00000511647.5
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS TCA 72 bp CTGGCATCACCACACCATTTTTCTGTTGTGCTGATATaGGACGTGCTTCTGCAAAGGTCTTTTCTAAACCCA +
Preference number: 6 (lower is better)
Translates to: LASPHHFSVVLI*DVLLQRSFLNP
Trigger: TGGGTTTAGAAAAGACCTTTGCAGAAGCACGTCTCATATCAGCACAACAGAAAAATGGTGTGGTGATGCCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS CAA 90 bp CCCTCCAAGGTCATTTTCTTGCATTTATTAGGAGAGCAGAGTAACTaGCTTCATCAGGGCTATGAACTGAAAACCGCATGTTCTTCGCAA +
Preference number: 6 (lower is better)
Translates to: PSKVIFLHLLGEQSN*LHQGYELKTACSSQ
Trigger: TTGCGAAGAACATGCGGTTTTCAGTTCATAGCCCTGATGAAGCAAGTTACTCTGCTCTCCTAATAAATGCAAGAAAATGACCTTGGAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514740.1
CDS CAA 72 bp GGGCTTTTTCAGCGAATGAACCAAGGAAGTACCCATTaGTTTTCTGAAGAATGCAGAATGCCACTTCAAGTC +
Preference number: 6 (lower is better)
Translates to: GLFQRMNQGSTH*FSEECRMPLQV
Trigger: GACTTGAAGTGGCATTCTGCATTCTTCAGAAAACAAATGGGTACTTCCTTGGTTCATTCGCTGAAAAAGCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS CAA 90 bp ATTTGTTTTCTGAAGAATGCAGAATGCCACTTCAAGTCCTCTATCTaGGGAGCATCAGGGCCAACAGAAGGACTGTTAAACAAAAGCATG +
Preference number: 6 (lower is better)
Translates to: ICFLKNAECHFKSSI*GASGPTEGLLNKSM
Trigger: CATGCTTTTGTTTAACAGTCCTTCTGTTGGCCCTGATGCTCCCAAGATAGAGGACTTGAAGTGGCATTCTGCATTCTTCAGAAAACAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4
CDS TCA 72 bp TCAGCGAATGAACCAAGGAAGTACCCATTTGTTTTCTaGAGAATGCAGAATGCCACTTCAAGTCCTCTATCT +
Preference number: 6 (lower is better)
Translates to: SANEPRKYPFVF*RMQNATSSPLS
Trigger: AGATAGAGGACTTGAAGTGGCATTCTGCATTCTTCAGAAAACAAATGGGTACTTCCTTGGTTCATTCGCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000226319.11
ENST00000452328.6
ENST00000512960.5
ENST00000610919.4
ENST00000611140.4