RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for IVD (Homo sapiens)

Ensembl gene IDs: ENSG00000128928

Ensembl transcript IDs: ENST00000466756.2, ENST00000473112.6, ENST00000479013.7, ENST00000481262.6, ENST00000484250.1, ENST00000487418.8, ENST00000491554.6, ENST00000497252.5, ENST00000497816.1, ENST00000558610.5, ENST00000559575.5, ENST00000560660.1, ENST00000610693.5, ENST00000650656.1, ENST00000651168.1

Found 831 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCCTGCTCGGGTAGGGCCTGTGCCTGCTGCCCAGTCAGCTGTGGGTaGTCACACGGCCAGGACTGGATGGTGCCCGTGGCAGGGCGGTGC +
Preference number: 1 (lower is better)
Translates to: ACSGRACACCPVSCG*SHGQDWMVPVAGRC
Trigger: GCACCGCCCTGCCACGGGCACCATCCAGTCCTGGCCGTGTGACCACCCACAGCTGACTGGGCAGCAGGCACAGGCCCTACCCGAGCAGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR GCA 90 bp GCTGCCCAGTCAGCTGTGGGTGGTCACACGGCCAGGACTGGATGGTaGCCGTGGCAGGGCGGTGCACAAGGGCTCAGAGGTGCTGTACAG +
Preference number: 1 (lower is better)
Translates to: AAQSAVGGHTARTGW*PWQGGAQGLRGAVQ
Trigger: CTGTACAGCACCTCTGAGCCCTTGTGCACCGCCCTGCCACGGGCACCATCCAGTCCTGGCCGTGTGACCACCCACAGCTGACTGGGCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR GCA 90 bp TCATGCGAGCCAACTCCGGCCTGCTCGGGTAGGGCCTGTGCCTGCTaGCCAGTCAGCTGTGGGTGGTCACACGGCCAGGACTGGATGGTG +
Preference number: 1 (lower is better)
Translates to: SCEPTPACSGRACAC*PVSCGWSHGQDWMV
Trigger: CACCATCCAGTCCTGGCCGTGTGACCACCCACAGCTGACTGGGCAGCAGGCACAGGCCCTACCCGAGCAGGCCGGAGTTGGCTCGCATGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR GCA 90 bp GAGTCATGCGAGCCAACTCCGGCCTGCTCGGGTAGGGCCTGTGCCTaGTGCCCAGTCAGCTGTGGGTGGTCACACGGCCAGGACTGGATG +
Preference number: 1 (lower is better)
Translates to: ESCEPTPACSGRACA*CPVSCGWSHGQDWM
Trigger: CATCCAGTCCTGGCCGTGTGACCACCCACAGCTGACTGGGCAGCAGGCACAGGCCCTACCCGAGCAGGCCGGAGTTGGCTCGCATGACTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR CCA 90 bp CCTGCTGCCCAGTCAGCTGTGGGTGGTCACACGGCCAGGACTGGATaGTGCCCGTGGCAGGGCGGTGCACAAGGGCTCAGAGGTGCTGTA +
Preference number: 1 (lower is better)
Translates to: PAAQSAVGGHTARTG*CPWQGGAQGLRGAV
Trigger: TACAGCACCTCTGAGCCCTTGTGCACCGCCCTGCCACGGGCACCATCCAGTCCTGGCCGTGTGACCACCCACAGCTGACTGGGCAGCAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR GCA 90 bp GGGTGGTCACACGGCCAGGACTGGATGGTGCCCGTGGCAGGGCGGTaGACAAGGGCTCAGAGGTGCTGTACAGGAGGAGCCAGTCTTCCA +
Preference number: 1 (lower is better)
Translates to: GWSHGQDWMVPVAGR*TRAQRCCTGGASLP
Trigger: TGGAAGACTGGCTCCTCCTGTACAGCACCTCTGAGCCCTTGTGCACCGCCCTGCCACGGGCACCATCCAGTCCTGGCCGTGTGACCACCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR CCA 90 bp CAGTCAGCTGTGGGTGGTCACACGGCCAGGACTGGATGGTGCCCGTaGCAGGGCGGTGCACAAGGGCTCAGAGGTGCTGTACAGGAGGAG +
Preference number: 1 (lower is better)
Translates to: QSAVGGHTARTGWCP*QGGAQGLRGAVQEE
Trigger: CTCCTCCTGTACAGCACCTCTGAGCCCTTGTGCACCGCCCTGCCACGGGCACCATCCAGTCCTGGCCGTGTGACCACCCACAGCTGACTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR TCA 90 bp TTGCATCTCAGTTCCCTCGCAGTGCTCACCTGCTCCAGGGACGTCTaGCCTCGGGTCTCGCCCTCCCTCCCAGGTGGGTGTTGGGCGGAA +
Preference number: 1 (lower is better)
Translates to: LHLSSLAVLTCSRDV*PRVSPSLPGGCWAE
Trigger: TTCCGCCCAACACCCACCTGGGAGGGAGGGCGAGACCCGAGGTCAGACGTCCCTGGAGCAGGTGAGCACTGCGAGGGAACTGAGATGCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481262.6
3UTR CCA 90 bp CTGCTCCAGGGACGTCTGACCTCGGGTCTCGCCCTCCCTCCCAGGTaGGTGTTGGGCGGAAAAGGTCTGCCCAAAACACTGAATGCCGTC +
Preference number: 1 (lower is better)
Translates to: LLQGRLTSGLALPPR*VLGGKGLPKTLNAV
Trigger: GACGGCATTCAGTGTTTTGGGCAGACCTTTTCCGCCCAACACCCACCTGGGAGGGAGGGCGAGACCCGAGGTCAGACGTCCCTGGAGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481262.6
3UTR CCA 90 bp GAGCAGAGAGATCTCCTTGCCAGAGCCTCACCCAAGAGAAAGAGGTaGGTACCTGCATGCCCCCAGGTGCCTACCCTGGGAGGTGGGCAC +
Preference number: 1 (lower is better)
Translates to: EQRDLLARASPKRKR*VPACPQVPTLGGGH
Trigger: GTGCCCACCTCCCAGGGTAGGCACCTGGGGGCATGCAGGTACCCACCTCTTTCTCTTGGGTGAGGCTCTGGCAAGGAGATCTCTCTGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR GCA 90 bp CCAACCCCACCTGTCTCAAGCCTCAGGCTAGGAACAGCACTTGGCTaGAGGCCAGGACCAAGAGCCAGGATAGGTGCTGCTGGGCTGAGA +
Preference number: 1 (lower is better)
Translates to: PTPPVSSLRLGTALG*RPGPRARIGAAGLR
Trigger: TCTCAGCCCAGCAGCACCTATCCTGGCTCTTGGTCCTGGCCTGCAGCCAAGTGCTGTTCCTAGCCTGAGGCTTGAGACAGGTGGGGTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR GCA 90 bp GACTGGATGGTGCCCGTGGCAGGGCGGTGCACAAGGGCTCAGAGGTaGTGTACAGGAGGAGCCAGTCTTCCAACAGTACACAAAAGCACG +
Preference number: 1 (lower is better)
Translates to: DWMVPVAGRCTRAQR*CTGGASLPTVHKST
Trigger: CGTGCTTTTGTGTACTGTTGGAAGACTGGCTCCTCCTGTACAGCACCTCTGAGCCCTTGTGCACCGCCCTGCCACGGGCACCATCCAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR TCA 90 bp AATCACACAACACTAGCCGTGGCACAGGCCCGGCTGCGAGGCCCATaGTGCTTGGGAGCTGTTGTGGAGAACTCAACCTCATCCAGAGGC +
Preference number: 1 (lower is better)
Translates to: NHTTLAVAQARLRGP*CLGAVVENSTSSRG
Trigger: GCCTCTGGATGAGGTTGAGTTCTCCACAACAGCTCCCAAGCATCATGGGCCTCGCAGCCGGGCCTGTGCCACGGCTAGTGTTGTGTGATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR CCA 90 bp GAAGTGAAAGGGACTGCCTATGAGCCCAGGATCTTGCCCTCAGGATaGGACGGAACTGGGGTTGGTGAGGAGCCAACCCCACCTGTCTCA +
Preference number: 1 (lower is better)
Translates to: EVKGTAYEPRILPSG*DGTGVGEEPTPPVS
Trigger: TGAGACAGGTGGGGTTGGCTCCTCACCAACCCCAGTTCCGTCCCATCCTGAGGGCAAGATCCTGGGCTCATAGGCAGTCCCTTTCACTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR CCA 90 bp ATTAGCCATAGGGTATCTGGAGAAATGTACACAGGCAGCCTCAGCTaGAGTCATGCGAGCCAACTCCGGCCTGCTCGGGTAGGGCCTGTG +
Preference number: 1 (lower is better)
Translates to: ISHRVSGEMYTGSLS*SHASQLRPARVGPV
Trigger: CACAGGCCCTACCCGAGCAGGCCGGAGTTGGCTCGCATGACTCCAGCTGAGGCTGCCTGTGTACATTTCTCCAGATACCCTATGGCTAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR TCA 90 bp CATCGCAGGCCTTGGCGACATTGTAGACATACTGCCGACACGCCATaGGGCGGGTGTACATGTCAGCCATCTTCCCCTGCATCAACTGGA +
Preference number: 1 (lower is better)
Translates to: HRRPWRHCRHTADTP*GGCTCQPSSPASTG
Trigger: TCCAGTTGATGCAGGGGAAGATGGCTGACATGTACACCCGCCTCATGGCGTGTCGGCAGTATGTCTACAATGTCGCCAAGGCCTGCGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481262.6
3UTR CCA 90 bp AGCACTTGGCTGCAGGCCAGGACCAAGAGCCAGGATAGGTGCTGCTaGGCTGAGAACCAAGAAAACCAGTTCCCTCTTTTTGGAACTCGG +
Preference number: 1 (lower is better)
Translates to: STWLQARTKSQDRCC*AENQENQFPLFGTR
Trigger: CCGAGTTCCAAAAAGAGGGAACTGGTTTTCTTGGTTCTCAGCCCAGCAGCACCTATCCTGGCTCTTGGTCCTGGCCTGCAGCCAAGTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR TCA 90 bp AAAACACTGAATGCCGTCCAGGGCTACCTGTGTGGCACACTCAGCTaGGTAAAGAATCACACCTGCACAGTCCTTAGCAGTGCAATGGCC +
Preference number: 1 (lower is better)
Translates to: KTLNAVQGYLCGTLS*VKNHTCTVLSSAMA
Trigger: GGCCATTGCACTGCTAAGGACTGTGCAGGTGTGATTCTTTACTCAGCTGAGTGTGCCACACAGGTAGCCCTGGACGGCATTCAGTGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481262.6
3UTR GCA 90 bp CAGACCAAAGGCACAGGGATGAGAAACATGGCAGTGAGGACTCCTTaGAACAAGAACACGAACATTCAGCAGGGAAGGAGGGAAGCAGCA +
Preference number: 1 (lower is better)
Translates to: QTKGTGMRNMAVRTP*NKNTNIQQGRREAA
Trigger: TGCTGCTTCCCTCCTTCCCTGCTGAATGTTCGTGTTCTTGTTGCAAGGAGTCCTCACTGCCATGTTTCTCATCCCTGTGCCTTTGGTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466756.2
3UTR GCA 90 bp CCTGTACCAAGTTCCAATTCATGGAGAGGGGCCATGATTCTGCTGTaGTTGAGCAGAGAGATCTCCTTGCCAGAGCCTCACCCAAGAGAA +
Preference number: 1 (lower is better)
Translates to: PVPSSNSWRGAMILL*LSREISLPEPHPRE
Trigger: TTCTCTTGGGTGAGGCTCTGGCAAGGAGATCTCTCTGCTCAAGCACAGCAGAATCATGGCCCCTCTCCATGAATTGGAACTTGGTACAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR GCA 90 bp AACAACCCAGACCCATTCCCTTCTCAGATCACACTCTATCCAGACTaGTGTACAGTGCGGCCCAAAGCTGGAATTCTCAGAACACCCCCA +
Preference number: 1 (lower is better)
Translates to: NNPDPFPSQITLYPD*CTVRPKAGILRTPP
Trigger: TGGGGGTGTTCTGAGAATTCCAGCTTTGGGCCGCACTGTACAGCAGTCTGGATAGAGTGTGATCTGAGAAGGGAATGGGTCTGGGTTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR TCA 90 bp TTAGTCACATTCATCTCCAACATAGCAGGGAGCAAGACAAGGAAGTaGAAGGGACTGCCTATGAGCCCAGGATCTTGCCCTCAGGATGGG +
Preference number: 1 (lower is better)
Translates to: LVTFISNIAGSKTRK*KGLPMSPGSCPQDG
Trigger: CCCATCCTGAGGGCAAGATCCTGGGCTCATAGGCAGTCCCTTTCACTTCCTTGTCTTGCTCCCTGCTATGTTGGAGATGAATGTGACTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR TCA 90 bp CCAAGGAGCTCTGTCCCAAAGACGTTGGAGAACATAGAAGGATTTTaGGGAAAGGAAGCTTCTGGTCTGAGATCCAAGAGGCGAGTTGGG +
Preference number: 1 (lower is better)
Translates to: PRSSVPKTLENIEGF*GKEASGLRSKRRVG
Trigger: CCCAACTCGCCTCTTGGATCTCAGACCAGAAGCTTCCTTTCCTCAAAATCCTTCTATGTTCTCCAACGTCTTTGGGACAGAGCTCCTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481262.6
ENST00000491554.6
3UTR GCA 90 bp ACCCATTCCCTTCTCAGATCACACTCTATCCAGACTGCTGTACAGTaGGGCCCAAAGCTGGAATTCTCAGAACACCCCCATTTTTGCCAT +
Preference number: 1 (lower is better)
Translates to: THSLLRSHSIQTAVQ*GPKLEFSEHPHFCH
Trigger: ATGGCAAAAATGGGGGTGTTCTGAGAATTCCAGCTTTGGGCCGCACTGTACAGCAGTCTGGATAGAGTGTGATCTGAGAAGGGAATGGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR CCA 90 bp TCAGATCACACTCTATCCAGACTGCTGTACAGTGCGGCCCAAAGCTaGAATTCTCAGAACACCCCCATTTTTGCCATGAGCAGATCTGGA +
Preference number: 1 (lower is better)
Translates to: SDHTLSRLLYSAAQS*NSQNTPIFAMSRSG
Trigger: TCCAGATCTGCTCATGGCAAAAATGGGGGTGTTCTGAGAATTCCAGCTTTGGGCCGCACTGTACAGCAGTCTGGATAGAGTGTGATCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR GCA 90 bp CACACGGCCAGGACTGGATGGTGCCCGTGGCAGGGCGGTGCACAAGGGCTCAGATGGCACAGGCCCGGCTaGGAGGCCCATGATGCTTGG +
Preference number: 2 (lower is better)
Translates to: HTARTGWCPWQGGAQGLRWHRPG*EAHDAW
Trigger: CCAAGCATCATGGGCCTCGCAGCCGGGCCTGTGCCA...TCTGAGCCCTTGTGCACCGCCCTGCCACGGGCACCATCCAGTCCTGGCCGTGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR TCA 90 bp CACACGGCCAGGACTGGATGGTGCCCGTGGCAGGGCGGTGCACAAGGGCTCAGAGAACTCCTGACCTTGTaGTCTGCCCGCCTCGGCCTC +
Preference number: 2 (lower is better)
Translates to: HTARTGWCPWQGGAQGLRELLTL*SARLGL
Trigger: GAGGCCGAGGCGGGCAGATCACAAGGTCAGGAGTTC...TCTGAGCCCTTGTGCACCGCCCTGCCACGGGCACCATCCAGTCCTGGCCGTGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR TCA 90 bp CACACGGCCAGGACTGGATGGTGCCCGTGGCAGGGCGGTGCACAAGGGCTCAGACTGGTCTTGAACTCCTaGCCTCGTGATCCACCTGCC +
Preference number: 2 (lower is better)
Translates to: HTARTGWCPWQGGAQGLRLVLNS*PRDPPA
Trigger: GGCAGGTGGATCACGAGGTCAGGAGTTCAAGACCAG...TCTGAGCCCTTGTGCACCGCCCTGCCACGGGCACCATCCAGTCCTGGCCGTGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR GCA 90 bp CACACGGCCAGGACTGGATGGTGCCCGTGGCAGGGCGGTGCACAAGGGCTCAGAAGCTCCTGCAACCTCTaGCTCCTGCGTTCAAGCGAT +
Preference number: 2 (lower is better)
Translates to: HTARTGWCPWQGGAQGLRSSCNL*LLRSSD
Trigger: ATCGCTTGAACGCAGGAGGCAGAGGTTGCAGGAGCT...TCTGAGCCCTTGTGCACCGCCCTGCCACGGGCACCATCCAGTCCTGGCCGTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR CCA 90 bp CACACGGCCAGGACTGGATGGTGCCCGTGGCAGGGCGGTGCACAAGGGCTCAGAAGCCTCCTGAGTAGCTaGGATTACAGACGTGCACCA +
Preference number: 2 (lower is better)
Translates to: HTARTGWCPWQGGAQGLRSLLSS*DYRRAP
Trigger: TGGTGCACGTCTGTAATCCCAGCTACTCAGGAGGCT...TCTGAGCCCTTGTGCACCGCCCTGCCACGGGCACCATCCAGTCCTGGCCGTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR CCA 90 bp CACACGGCCAGGACTGGATGGTGCCCGTGGCAGGGCGGTGCACAAGGGCTCAGATGTTGGTCGTCAGGCTaGTCTCGAACTCCTGACCTT +
Preference number: 2 (lower is better)
Translates to: HTARTGWCPWQGGAQGLRCWSSG*SRTPDL
Trigger: AAGGTCAGGAGTTCGAGACCAGCCTGACGACCAACA...TCTGAGCCCTTGTGCACCGCCCTGCCACGGGCACCATCCAGTCCTGGCCGTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR TCA 90 bp GCGCCGAGTACCAGTTTCAGCAAAGGTGCAGAGCTGTGGTATAGGGGTGAGGCAGCCGAGAGCGGAGCCTaGAGGAGCAGGCACTCTTCG +
Preference number: 2 (lower is better)
Translates to: APSTSFSKGAELWYRGEAAESGA*RSRHSS
Trigger: CGAAGAGTGCCTGCTCCTTCAGGCTCCGCTCTCGGC...TGCCTCACCCCTATACCACAGCTCTGCACCTTTGCTGAAACTGGTACTCGGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491554.6
3UTR-3UTR GCA 90 bp CAGGGCTTAGACAGACTGGATGAAGCGCCCCATTTTGCCACATTGTCTCCAGGCCCCGTGGCAGGGCGGTaGACAAGGGCTCAGAGGTGC +
Preference number: 2 (lower is better)
Translates to: QGLDRLDEAPHFATLSPGPVAGR*TRAQRC
Trigger: GCACCTCTGAGCCCTTGTGCACCGCCCTGCCACGGG...GCCTGGAGACAATGTGGCAAAATGGGGCGCTTCATCCAGTCTGTCTAAGCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR GCA 90 bp GGCGAGTTGGGGGAGCAGCACGCGGGGTGTGAGTTCAGGCAGGAGGATCTTGCATCAGCCATCTTCCCCTaGATCAACTGGAAGTGGCCG +
Preference number: 2 (lower is better)
Translates to: GELGEQHAGCEFRQEDLASAIFP*INWKWP
Trigger: CGGCCACTTCCAGTTGATGCAGGGGAAGATGGCTGA...TGCAAGATCCTCCTGCCTGAACTCACACCCCGCGTGCTGCTCCCCCAACTCGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000481262.6
3UTR-3UTR GCA 90 bp GCCATAGGGTATCTGGAGAAATGTACACAGGCAGCCTCAGCTGGAGTCATGCGACCCGTGGCAGGGCGGTaGACAAGGGCTCAGAGGTGC +
Preference number: 2 (lower is better)
Translates to: AIGYLEKCTQAASAGVMRPVAGR*TRAQRC
Trigger: GCACCTCTGAGCCCTTGTGCACCGCCCTGCCACGGG...TCGCATGACTCCAGCTGAGGCTGCCTGTGTACATTTCTCCAGATACCCTATGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR GCA 90 bp GGTATCTGGAGAAATGTACACAGGCAGCCTCAGCTGGAGTCATGCGAGCCAACTGCCAGGACTGGATGGTaGCCGTGGCAGGGCGGTGCA +
Preference number: 2 (lower is better)
Translates to: GIWRNVHRQPQLESCEPTARTGW*PWQGGA
Trigger: TGCACCGCCCTGCCACGGGCACCATCCAGTCCTGGC...AGTTGGCTCGCATGACTCCAGCTGAGGCTGCCTGTGTACATTTCTCCAGATACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR GCA 90 bp CCAGACCCATTCCCTTCTCAGATCACACTCTATCCAGACTGCTGTACAGTGCGGGAGCCAACTCCGGCCTaGTCGGGTAGGGCCTGTGCC +
Preference number: 2 (lower is better)
Translates to: PDPFPSQITLYPDCCTVREPTPA*SGRACA
Trigger: GGCACAGGCCCTACCCGAGCAGGCCGGAGTTGGCTC...CCGCACTGTACAGCAGTCTGGATAGAGTGTGATCTGAGAAGGGAATGGGTCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR CCA 90 bp CCAGACCCATTCCCTTCTCAGATCACACTCTATCCAGACTGCTGTACAGTGCGGGCCTACCCTGGGAGGTaGGCACCTGCATGCCCCCAG +
Preference number: 2 (lower is better)
Translates to: PDPFPSQITLYPDCCTVRAYPGR*APACPQ
Trigger: CTGGGGGCATGCAGGTGCCCACCTCCCAGGGTAGGC...CCGCACTGTACAGCAGTCTGGATAGAGTGTGATCTGAGAAGGGAATGGGTCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR CCA 90 bp CAAGACAAGGAAGTGAAAGGGACTGCCTATGAGCCCAGGATCTTGCCCTCAGGAGCCTACCCTGGGAGGTaGGCACCTGCATGCCCCCAG +
Preference number: 2 (lower is better)
Translates to: QDKEVKGTAYEPRILPSGAYPGR*APACPQ
Trigger: CTGGGGGCATGCAGGTGCCCACCTCCCAGGGTAGGC...TCCTGAGGGCAAGATCCTGGGCTCATAGGCAGTCCCTTTCACTTCCTTGTCTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR CCA 90 bp CAGGGCTTAGACAGACTGGATGAAGCGCCCCATTTTGCCACATTGTCTCCAGGCACTGGATGGTGCCCGTaGCAGGGCGGTGCACAAGGG +
Preference number: 2 (lower is better)
Translates to: QGLDRLDEAPHFATLSPGTGWCP*QGGAQG
Trigger: CCCTTGTGCACCGCCCTGCCACGGGCACCATCCAGT...GCCTGGAGACAATGTGGCAAAATGGGGCGCTTCATCCAGTCTGTCTAAGCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR CCA 90 bp CAAGACAAGGAAGTGAAAGGGACTGCCTATGAGCCCAGGATCTTGCCCTCAGGAACGGCCAGGACTGGATaGTGCCCGTGGCAGGGCGGT +
Preference number: 2 (lower is better)
Translates to: QDKEVKGTAYEPRILPSGTARTG*CPWQGG
Trigger: ACCGCCCTGCCACGGGCACCATCCAGTCCTGGCCGT...TCCTGAGGGCAAGATCCTGGGCTCATAGGCAGTCCCTTTCACTTCCTTGTCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR CCA 90 bp GATGAGGACACCCCAAGCGCCGAGTACCAGTTTCAGCAAAGGTGCAGAGCTGTGATCCAAGAGGCGAGTTaGGGGAGCAGCACGCGGGGT +
Preference number: 2 (lower is better)
Translates to: DEDTPSAEYQFQQRCRAVIQEAS*GSSTRG
Trigger: ACCCCGCGTGCTGCTCCCCCAACTCGCCTCTTGGAT...CACAGCTCTGCACCTTTGCTGAAACTGGTACTCGGCGCTTGGGGTGTCCTCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000481262.6
ENST00000491554.6
3UTR-3UTR TCA 90 bp GGGTATCTGGAGAAATGTACACAGGCAGCCTCAGCTGGAGTCATGCGAGCCAACCGGCTGCGAGGCCCATaGTGCTTGGGAGCTGTTGTG +
Preference number: 2 (lower is better)
Translates to: GYLEKCTQAASAGVMRANRLRGP*CLGAVV
Trigger: CACAACAGCTCCCAAGCATCATGGGCCTCGCAGCCG...GTTGGCTCGCATGACTCCAGCTGAGGCTGCCTGTGTACATTTCTCCAGATACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR GCA 90 bp CAAGACAAGGAAGTGAAAGGGACTGCCTATGAGCCCAGGATCTTGCCCTCAGGATGGCACAGGCCCGGCTaGGAGGCCCATGATGCTTGG +
Preference number: 2 (lower is better)
Translates to: QDKEVKGTAYEPRILPSGWHRPG*EAHDAW
Trigger: CCAAGCATCATGGGCCTCGCAGCCGGGCCTGTGCCA...TCCTGAGGGCAAGATCCTGGGCTCATAGGCAGTCCCTTTCACTTCCTTGTCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR GCA 90 bp GGTATCTGGAGAAATGTACACAGGCAGCCTCAGCTGGAGTCATGCGAGCCAACTAGGGCCTGTGCCTGCTaGCCAGTCAGCTGTGGGTGG +
Preference number: 2 (lower is better)
Translates to: GIWRNVHRQPQLESCEPTRACAC*PVSCGW
Trigger: CCACCCACAGCTGACTGGGCAGCAGGCACAGGCCCT...AGTTGGCTCGCATGACTCCAGCTGAGGCTGCCTGTGTACATTTCTCCAGATACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR GCA 90 bp CCAGACCCATTCCCTTCTCAGATCACACTCTATCCAGACTGCTGTACAGTGCGGAGGGCCTGTGCCTGCTaGCCAGTCAGCTGTGGGTGG +
Preference number: 2 (lower is better)
Translates to: PDPFPSQITLYPDCCTVRRACAC*PVSCGW
Trigger: CCACCCACAGCTGACTGGGCAGCAGGCACAGGCCCT...CCGCACTGTACAGCAGTCTGGATAGAGTGTGATCTGAGAAGGGAATGGGTCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR GCA 90 bp ACCCAGACCCATTCCCTTCTCAGATCACACTCTATCCAGACTGCTGTACAGTGCGAGCCAACTCCGGCCTaGTCGGGTAGGGCCTGTGCC +
Preference number: 2 (lower is better)
Translates to: TQTHSLLRSHSIQTAVQCEPTPA*SGRACA
Trigger: GGCACAGGCCCTACCCGAGCAGGCCGGAGTTGGCTC...GCACTGTACAGCAGTCTGGATAGAGTGTGATCTGAGAAGGGAATGGGTCTGGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR GCA 90 bp CCCCAAGCGCCGAGTACCAGTTTCAGCAAAGGTGCAGAGCTGTGGTATAGGGGTTCAGTTCCCTCGCAGTaGTCACCTGCTCCAGGGACG +
Preference number: 2 (lower is better)
Translates to: PQAPSTSFSKGAELWYRGSVPSQ*SPAPGT
Trigger: CGTCCCTGGAGCAGGTGAGCACTGCGAGGGAACTGA...ACCCCTATACCACAGCTCTGCACCTTTGCTGAAACTGGTACTCGGCGCTTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481262.6
3UTR-3UTR CCA 90 bp GGTATCTGGAGAAATGTACACAGGCAGCCTCAGCTGGAGTCATGCGAGCCAACTACTGGATGGTGCCCGTaGCAGGGCGGTGCACAAGGG +
Preference number: 2 (lower is better)
Translates to: GIWRNVHRQPQLESCEPTTGWCP*QGGAQG
Trigger: CCCTTGTGCACCGCCCTGCCACGGGCACCATCCAGT...AGTTGGCTCGCATGACTCCAGCTGAGGCTGCCTGTGTACATTTCTCCAGATACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR CCA 90 bp GCCATAGGGTATCTGGAGAAATGTACACAGGCAGCCTCAGCTGGAGTCATGCGAACTGGATGGTGCCCGTaGCAGGGCGGTGCACAAGGG +
Preference number: 2 (lower is better)
Translates to: AIGYLEKCTQAASAGVMRTGWCP*QGGAQG
Trigger: CCCTTGTGCACCGCCCTGCCACGGGCACCATCCAGT...TCGCATGACTCCAGCTGAGGCTGCCTGTGTACATTTCTCCAGATACCCTATGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR CCA 90 bp ACCCAGACCCATTCCCTTCTCAGATCACACTCTATCCAGACTGCTGTACAGTGCACGGCCAGGACTGGATaGTGCCCGTGGCAGGGCGGT +
Preference number: 2 (lower is better)
Translates to: TQTHSLLRSHSIQTAVQCTARTG*CPWQGG
Trigger: ACCGCCCTGCCACGGGCACCATCCAGTCCTGGCCGT...GCACTGTACAGCAGTCTGGATAGAGTGTGATCTGAGAAGGGAATGGGTCTGGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR CCA 90 bp TGGGAAAGGGAGGCTGAGACCTCTCTCCTAAGGGCTGATTTTACCTTCCTGTCCTCACACGGCCAGGACTaGATGGTGCCCGTGGCAGGG +
Preference number: 2 (lower is better)
Translates to: WEREAETSLLRADFTFLSSHGQD*MVPVAG
Trigger: CCCTGCCACGGGCACCATCCAGTCCTGGCCGTGTGA...GGACAGGAAGGTAAAATCAGCCCTTAGGAGAGAGGTCTCAGCCTCCCTTTCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR CCA 90 bp GGGCCACCTAAGCTTTGTAAACCCTGCCAAGGAGCTCTGTCCCAAAGACGTTGGATCCAAGAGGCGAGTTaGGGGAGCAGCACGCGGGGT +
Preference number: 2 (lower is better)
Translates to: GPPKLCKPCQGALSQRRWIQEAS*GSSTRG
Trigger: ACCCCGCGTGCTGCTCCCCCAACTCGCCTCTTGGAT...CCAACGTCTTTGGGACAGAGCTCCTTGGCAGGGTTTACAAAGCTTAGGTGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000481262.6
ENST00000491554.6
3UTR-3UTR TCA 90 bp CAAGACAAGGAAGTGAAAGGGACTGCCTATGAGCCCAGGATCTTGCCCTCAGGACGGCTGCGAGGCCCATaGTGCTTGGGAGCTGTTGTG +
Preference number: 2 (lower is better)
Translates to: QDKEVKGTAYEPRILPSGRLRGP*CLGAVV
Trigger: CACAACAGCTCCCAAGCATCATGGGCCTCGCAGCCG...TCCTGAGGGCAAGATCCTGGGCTCATAGGCAGTCCCTTTCACTTCCTTGTCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR TCA 90 bp TGGGAAAGGGAGGCTGAGACCTCTCTCCTAAGGGCTGATTTTACCTTCCTGTCCGAACTCCTGACCTTGTaGTCTGCCCGCCTCGGCCTC +
Preference number: 2 (lower is better)
Translates to: WEREAETSLLRADFTFLSELLTL*SARLGL
Trigger: GAGGCCGAGGCGGGCAGATCACAAGGTCAGGAGTTC...GGACAGGAAGGTAAAATCAGCCCTTAGGAGAGAGGTCTCAGCCTCCCTTTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR TCA 90 bp CAGGGCTTAGACAGACTGGATGAAGCGCCCCATTTTGCCACATTGTCTCCAGGCCTGGTCTCGAACTCCTaGCCTTGTGATCTGCCCGCC +
Preference number: 2 (lower is better)
Translates to: QGLDRLDEAPHFATLSPGLVSNS*PCDLPA
Trigger: GGCGGGCAGATCACAAGGTCAGGAGTTCGAGACCAG...GCCTGGAGACAATGTGGCAAAATGGGGCGCTTCATCCAGTCTGTCTAAGCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR GCA 90 bp ACCCAGACCCATTCCCTTCTCAGATCACACTCTATCCAGACTGCTGTACAGTGCGGTAGGGCCTGTGCCTaGTGCCCAGTCAGCTGTGGG +
Preference number: 2 (lower is better)
Translates to: TQTHSLLRSHSIQTAVQCGRACA*CPVSCG
Trigger: CCCACAGCTGACTGGGCAGCAGGCACAGGCCCTACC...GCACTGTACAGCAGTCTGGATAGAGTGTGATCTGAGAAGGGAATGGGTCTGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR CCA 90 bp GGGTATCTGGAGAAATGTACACAGGCAGCCTCAGCTGGAGTCATGCGAGCCAACCTGCTGTGGGCAGGGTaGGAAAGCCGCCACATCTCT +
Preference number: 2 (lower is better)
Translates to: GYLEKCTQAASAGVMRANLLWAG*ESRHIS
Trigger: AGAGATGTGGCGGCTTTCCCACCCTGCCCACAGCAG...GTTGGCTCGCATGACTCCAGCTGAGGCTGCCTGTGTACATTTCTCCAGATACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR CCA 90 bp ACCCAGACCCATTCCCTTCTCAGATCACACTCTATCCAGACTGCTGTACAGTGCACTGGATGGTGCCCGTaGCAGGGCGGTGCACAAGGG +
Preference number: 2 (lower is better)
Translates to: TQTHSLLRSHSIQTAVQCTGWCP*QGGAQG
Trigger: CCCTTGTGCACCGCCCTGCCACGGGCACCATCCAGT...GCACTGTACAGCAGTCTGGATAGAGTGTGATCTGAGAAGGGAATGGGTCTGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR CCA 90 bp GGTATCTGGAGAAATGTACACAGGCAGCCTCAGCTGGAGTCATGCGAGCCAACTCCAGTCAGCTGTGGGTaGTCACACGGCCAGGACTGG +
Preference number: 2 (lower is better)
Translates to: GIWRNVHRQPQLESCEPTPVSCG*SHGQDW
Trigger: CCAGTCCTGGCCGTGTGACCACCCACAGCTGACTGG...AGTTGGCTCGCATGACTCCAGCTGAGGCTGCCTGTGTACATTTCTCCAGATACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR CCA 90 bp TGGGAAAGGGAGGCTGAGACCTCTCTCCTAAGGGCTGATTTTACCTTCCTGTCCCCAGTCAGCTGTGGGTaGTCACACGGCCAGGACTGG +
Preference number: 2 (lower is better)
Translates to: WEREAETSLLRADFTFLSPVSCG*SHGQDW
Trigger: CCAGTCCTGGCCGTGTGACCACCCACAGCTGACTGG...GGACAGGAAGGTAAAATCAGCCCTTAGGAGAGAGGTCTCAGCCTCCCTTTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR CCA 90 bp TGGGAAAGGGAGGCTGAGACCTCTCTCCTAAGGGCTGATTTTACCTTCCTGTCCCTGCCCAGTCAGCTGTaGGTGGTCACACGGCCAGGA +
Preference number: 2 (lower is better)
Translates to: WEREAETSLLRADFTFLSLPSQL*VVTRPG
Trigger: TCCTGGCCGTGTGACCACCCACAGCTGACTGGGCAG...GGACAGGAAGGTAAAATCAGCCCTTAGGAGAGAGGTCTCAGCCTCCCTTTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR CAA 90 bp TGGAGAGGGGCCATGATTCTGCTGTGCTTGAGCAGAGAGATCTCCTaGCCAGAGCCTCACCCAAGAGAAAGAGGTGGGTACCTGCATGCC +
Preference number: 2 (lower is better)
Translates to: WRGAMILLCLSREIS*PEPHPRERGGYLHA
Trigger: GGCATGCAGGTACCCACCTCTTTCTCTTGGGTGAGGCTCTGGCAAGGAGATCTCTCTGCTCAAGCACAGCAGAATCATGGCCCCTCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR TCA 90 bp ACCCAGACCCATTCCCTTCTCAGATCACACTCTATCCAGACTGCTGTACAGTGCCGGCTGCGAGGCCCATaGTGCTTGGGAGCTGTTGTG +
Preference number: 2 (lower is better)
Translates to: TQTHSLLRSHSIQTAVQCRLRGP*CLGAVV
Trigger: CACAACAGCTCCCAAGCATCATGGGCCTCGCAGCCG...GCACTGTACAGCAGTCTGGATAGAGTGTGATCTGAGAAGGGAATGGGTCTGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR TCA 90 bp CACACGGCCAGGACTGGATGGTGCCCGTGGCAGGGCGGTGCACAAGGGCTCAGACAATATGCTTCCTGCTaGGTCCATTTTAAATCACAC +
Preference number: 2 (lower is better)
Translates to: HTARTGWCPWQGGAQGLRQYASC*VHFKSH
Trigger: GTGTGATTTAAAATGGACTCAGCAGGAAGCATATTG...TCTGAGCCCTTGTGCACCGCCCTGCCACGGGCACCATCCAGTCCTGGCCGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR TCA 90 bp TGCTGTACAGGAGGAGCCAGTCTTCCAACAGTACACAAAAGCACGCTGTCCTCTGAACTCCTGACCTTGTaGTCTGCCCGCCTCGGCCTC +
Preference number: 2 (lower is better)
Translates to: CCTGGASLPTVHKSTLSSELLTL*SARLGL
Trigger: GAGGCCGAGGCGGGCAGATCACAAGGTCAGGAGTTC...AGAGGACAGCGTGCTTTTGTGTACTGTTGGAAGACTGGCTCCTCCTGTACAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR TCA 90 bp TGGGAAAGGGAGGCTGAGACCTCTCTCCTAAGGGCTGATTTTACCTTCCTGTCCCTGGTCTCGAACTCCTaGCCTTGTGATCTGCCCGCC +
Preference number: 2 (lower is better)
Translates to: WEREAETSLLRADFTFLSLVSNS*PCDLPA
Trigger: GGCGGGCAGATCACAAGGTCAGGAGTTCGAGACCAG...GGACAGGAAGGTAAAATCAGCCCTTAGGAGAGAGGTCTCAGCCTCCCTTTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR TCA 90 bp GCCATAGGGTATCTGGAGAAATGTACACAGGCAGCCTCAGCTGGAGTCATGCGACTGGTCTCGAACTCCTaGCCTTGTGATCTGCCCGCC +
Preference number: 2 (lower is better)
Translates to: AIGYLEKCTQAASAGVMRLVSNS*PCDLPA
Trigger: GGCGGGCAGATCACAAGGTCAGGAGTTCGAGACCAG...TCGCATGACTCCAGCTGAGGCTGCCTGTGTACATTTCTCCAGATACCCTATGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR GCA 90 bp CAAGACAAGGAAGTGAAAGGGACTGCCTATGAGCCCAGGATCTTGCCCTCAGGAACAAGCTCGGCTCACTaGAACGTCCGCCTCCTGGGT +
Preference number: 2 (lower is better)
Translates to: QDKEVKGTAYEPRILPSGTSSAH*NVRLLG
Trigger: ACCCAGGAGGCGGACGTTGCAGTGAGCCGAGCTTGT...TCCTGAGGGCAAGATCCTGGGCTCATAGGCAGTCCCTTTCACTTCCTTGTCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR GCA 90 bp CCAGACCCATTCCCTTCTCAGATCACACTCTATCCAGACTGCTGTACAGTGCGGACAAGCTCGGCTCACTaGAACGTCCGCCTCCTGGGT +
Preference number: 2 (lower is better)
Translates to: PDPFPSQITLYPDCCTVRTSSAH*NVRLLG
Trigger: ACCCAGGAGGCGGACGTTGCAGTGAGCCGAGCTTGT...CCGCACTGTACAGCAGTCTGGATAGAGTGTGATCTGAGAAGGGAATGGGTCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR GCA 90 bp CCAGACCCATTCCCTTCTCAGATCACACTCTATCCAGACTGCTGTACAGTGCGGCGCGATCTCAGCTCCTaGAACCTCTGCCTCCTGCGT +
Preference number: 2 (lower is better)
Translates to: PDPFPSQITLYPDCCTVRRDLSS*NLCLLR
Trigger: ACGCAGGAGGCAGAGGTTGCAGGAGCTGAGATCGCG...CCGCACTGTACAGCAGTCTGGATAGAGTGTGATCTGAGAAGGGAATGGGTCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR CCA 90 bp GGTATCTGGAGAAATGTACACAGGCAGCCTCAGCTGGAGTCATGCGAGCCAACTCTGCTGTGGGCAGGGTaGGAAAGCCGCCACATCTCT +
Preference number: 2 (lower is better)
Translates to: GIWRNVHRQPQLESCEPTLLWAG*ESRHIS
Trigger: AGAGATGTGGCGGCTTTCCCACCCTGCCCACAGCAG...AGTTGGCTCGCATGACTCCAGCTGAGGCTGCCTGTGTACATTTCTCCAGATACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR CCA 90 bp TGCTGTACAGGAGGAGCCAGTCTTCCAACAGTACACAAAAGCACGCTGTCCTCTGCTGACAAGAGCAGCTaGGCAGGAGGGCCTGCTGTG +
Preference number: 2 (lower is better)
Translates to: CCTGGASLPTVHKSTLSSADKSS*AGGPAV
Trigger: CACAGCAGGCCCTCCTGCCCAGCTGCTCTTGTCAGC...AGAGGACAGCGTGCTTTTGTGTACTGTTGGAAGACTGGCTCCTCCTGTACAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR CCA 90 bp GGGTATCTGGAGAAATGTACACAGGCAGCCTCAGCTGGAGTCATGCGAGCCAACCAGGCTGGAGTGCAATaGCACAAGCTCGGCTCACTG +
Preference number: 2 (lower is better)
Translates to: GYLEKCTQAASAGVMRANQAGVQ*HKLGSL
Trigger: CAGTGAGCCGAGCTTGTGCCATTGCACTCCAGCCTG...GTTGGCTCGCATGACTCCAGCTGAGGCTGCCTGTGTACATTTCTCCAGATACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR CCA 90 bp ACCCAGACCCATTCCCTTCTCAGATCACACTCTATCCAGACTGCTGTACAGTGCCTGCCCAGTCAGCTGTaGGTGGTCACACGGCCAGGA +
Preference number: 2 (lower is better)
Translates to: TQTHSLLRSHSIQTAVQCLPSQL*VVTRPG
Trigger: TCCTGGCCGTGTGACCACCCACAGCTGACTGGGCAG...GCACTGTACAGCAGTCTGGATAGAGTGTGATCTGAGAAGGGAATGGGTCTGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR CCA 90 bp CAGGGCTTAGACAGACTGGATGAAGCGCCCCATTTTGCCACATTGTCTCCAGGCACAGGCAGCCTCAGCTaGAGTCATGCGAGCCAACTC +
Preference number: 2 (lower is better)
Translates to: QGLDRLDEAPHFATLSPGTGSLS*SHASQL
Trigger: GAGTTGGCTCGCATGACTCCAGCTGAGGCTGCCTGT...GCCTGGAGACAATGTGGCAAAATGGGGCGCTTCATCCAGTCTGTCTAAGCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR TCA 90 bp CAAGACAAGGAAGTGAAAGGGACTGCCTATGAGCCCAGGATCTTGCCCTCAGGAACTCCTGACTGCAAGTaGTCCACCTGCCTTGGCCTC +
Preference number: 2 (lower is better)
Translates to: QDKEVKGTAYEPRILPSGTPDCK*STCLGL
Trigger: GAGGCCAAGGCAGGTGGATCACTTGCAGTCAGGAGT...TCCTGAGGGCAAGATCCTGGGCTCATAGGCAGTCCCTTTCACTTCCTTGTCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR TCA 90 bp TGGGAAAGGGAGGCTGAGACCTCTCTCCTAAGGGCTGATTTTACCTTCCTGTCCCTGGTCTTGAACTCCTaGCCTCGTGATCCACCTGCC +
Preference number: 2 (lower is better)
Translates to: WEREAETSLLRADFTFLSLVLNS*PRDPPA
Trigger: GGCAGGTGGATCACGAGGTCAGGAGTTCAAGACCAG...GGACAGGAAGGTAAAATCAGCCCTTAGGAGAGAGGTCTCAGCCTCCCTTTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR TCA 90 bp CAAGACAAGGAAGTGAAAGGGACTGCCTATGAGCCCAGGATCTTGCCCTCAGGACCTTCCTGTCCCTCATaGAAGAACGGGCTGGAGGAC +
Preference number: 2 (lower is better)
Translates to: QDKEVKGTAYEPRILPSGPSCPS*KNGLED
Trigger: GTCCTCCAGCCCGTTCTTTCATGAGGGACAGGAAGG...TCCTGAGGGCAAGATCCTGGGCTCATAGGCAGTCCCTTTCACTTCCTTGTCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR GCA 90 bp ACCCAGACCCATTCCCTTCTCAGATCACACTCTATCCAGACTGCTGTACAGTGCACAAGCTCGGCTCACTaGAACGTCCGCCTCCTGGGT +
Preference number: 2 (lower is better)
Translates to: TQTHSLLRSHSIQTAVQCTSSAH*NVRLLG
Trigger: ACCCAGGAGGCGGACGTTGCAGTGAGCCGAGCTTGT...GCACTGTACAGCAGTCTGGATAGAGTGTGATCTGAGAAGGGAATGGGTCTGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR GCA 90 bp TGCTGTACAGGAGGAGCCAGTCTTCCAACAGTACACAAAAGCACGCTGTCCTCTTCGCCCAGGCTGGAGTaGAATGGCACAAGCTCGGCT +
Preference number: 2 (lower is better)
Translates to: CCTGGASLPTVHKSTLSSSPRLE*NGTSSA
Trigger: AGCCGAGCTTGTGCCATTGCACTCCAGCCTGGGCGA...AGAGGACAGCGTGCTTTTGTGTACTGTTGGAAGACTGGCTCCTCCTGTACAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR GCA 90 bp TGCTGTACAGGAGGAGCCAGTCTTCCAACAGTACACAAAAGCACGCTGTCCTCTCGCGATCTCAGCTCCTaGAACCTCTGCCTCCTGCGT +
Preference number: 2 (lower is better)
Translates to: CCTGGASLPTVHKSTLSSRDLSS*NLCLLR
Trigger: ACGCAGGAGGCAGAGGTTGCAGGAGCTGAGATCGCG...AGAGGACAGCGTGCTTTTGTGTACTGTTGGAAGACTGGCTCCTCCTGTACAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR GCA 90 bp CAGGGCTTAGACAGACTGGATGAAGCGCCCCATTTTGCCACATTGTCTCCAGGCACAAGGGCTCAGAGGTaGTGTACAGGAGGAGCCAGT +
Preference number: 2 (lower is better)
Translates to: QGLDRLDEAPHFATLSPGTRAQR*CTGGAS
Trigger: ACTGGCTCCTCCTGTACAGCACCTCTGAGCCCTTGT...GCCTGGAGACAATGTGGCAAAATGGGGCGCTTCATCCAGTCTGTCTAAGCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR CCA 90 bp ACCCAGACCCATTCCCTTCTCAGATCACACTCTATCCAGACTGCTGTACAGTGCCTGCTGTGGGCAGGGTaGGAAAGCCGCCACATCTCT +
Preference number: 2 (lower is better)
Translates to: TQTHSLLRSHSIQTAVQCLLWAG*ESRHIS
Trigger: AGAGATGTGGCGGCTTTCCCACCCTGCCCACAGCAG...GCACTGTACAGCAGTCTGGATAGAGTGTGATCTGAGAAGGGAATGGGTCTGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR CCA 90 bp AGCAAGATGGCCCTTTTAGTCACATTCATCTCCAACATAGCAGGGAGCAAGACAGCCTACCCTGGGAGGTaGGCACCTGCATGCCCCCAG +
Preference number: 2 (lower is better)
Translates to: SKMALLVTFISNIAGSKTAYPGR*APACPQ
Trigger: CTGGGGGCATGCAGGTGCCCACCTCCCAGGGTAGGC...TGTCTTGCTCCCTGCTATGTTGGAGATGAATGTGACTAAAAGGGCCATCTTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR CCA 90 bp GCCATAGGGTATCTGGAGAAATGTACACAGGCAGCCTCAGCTGGAGTCATGCGACCCAAGAGAAAGAGGTaGGTACCTGCATGCCCCCAG +
Preference number: 2 (lower is better)
Translates to: AIGYLEKCTQAASAGVMRPKRKR*VPACPQ
Trigger: CTGGGGGCATGCAGGTACCCACCTCTTTCTCTTGGG...TCGCATGACTCCAGCTGAGGCTGCCTGTGTACATTTCTCCAGATACCCTATGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR CCA 90 bp CAAGACAAGGAAGTGAAAGGGACTGCCTATGAGCCCAGGATCTTGCCCTCAGGACCCAAGAGAAAGAGGTaGGTACCTGCATGCCCCCAG +
Preference number: 2 (lower is better)
Translates to: QDKEVKGTAYEPRILPSGPKRKR*VPACPQ
Trigger: CTGGGGGCATGCAGGTACCCACCTCTTTCTCTTGGG...TCCTGAGGGCAAGATCCTGGGCTCATAGGCAGTCCCTTTCACTTCCTTGTCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR CCA 90 bp CACACGGCCAGGACTGGATGGTGCCCGTGGCAGGGCGGTGCACAAGGGCTCAGACTTATCCAAAATGCTTaGAACCACAAGTGTTTCAGA +
Preference number: 2 (lower is better)
Translates to: HTARTGWCPWQGGAQGLRLIQNA*NHKCFR
Trigger: TCTGAAACACTTGTGGTTCCAAGCATTTTGGATAAG...TCTGAGCCCTTGTGCACCGCCCTGCCACGGGCACCATCCAGTCCTGGCCGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR CCA 90 bp GCCATAGGGTATCTGGAGAAATGTACACAGGCAGCCTCAGCTGGAGTCATGCGACAGGCTGGAGTGCAATaGCACAAGCTCGGCTCACTG +
Preference number: 2 (lower is better)
Translates to: AIGYLEKCTQAASAGVMRQAGVQ*HKLGSL
Trigger: CAGTGAGCCGAGCTTGTGCCATTGCACTCCAGCCTG...TCGCATGACTCCAGCTGAGGCTGCCTGTGTACATTTCTCCAGATACCCTATGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR CCA 90 bp TGGGAAAGGGAGGCTGAGACCTCTCTCCTAAGGGCTGATTTTACCTTCCTGTCCCAGGCTGGAGTGCAATaGCACAAGCTCGGCTCACTG +
Preference number: 2 (lower is better)
Translates to: WEREAETSLLRADFTFLSQAGVQ*HKLGSL
Trigger: CAGTGAGCCGAGCTTGTGCCATTGCACTCCAGCCTG...GGACAGGAAGGTAAAATCAGCCCTTAGGAGAGAGGTCTCAGCCTCCCTTTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR CCA 90 bp CAAGACAAGGAAGTGAAAGGGACTGCCTATGAGCCCAGGATCTTGCCCTCAGGAACAGGCAGCCTCAGCTaGAGTCATGCGAGCCAACTC +
Preference number: 2 (lower is better)
Translates to: QDKEVKGTAYEPRILPSGTGSLS*SHASQL
Trigger: GAGTTGGCTCGCATGACTCCAGCTGAGGCTGCCTGT...TCCTGAGGGCAAGATCCTGGGCTCATAGGCAGTCCCTTTCACTTCCTTGTCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR CAA 90 bp CGACAGGGCTTAGACAGACTGGATGAAGCGCCCCATTTTGCCACATaGTCTCCAGGCTGGTCTCTCCAGCCACACATTAAGCCAGCAAGA +
Preference number: 2 (lower is better)
Translates to: RQGLDRLDEAPHFAT*SPGWSLQPHIKPAR
Trigger: TCTTGCTGGCTTAATGTGTGGCTGGAGAGACCAGCCTGGAGACAATGTGGCAAAATGGGGCGCTTCATCCAGTCTGTCTAAGCCCTGTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR GCA 90 bp CAAGACAAGGAAGTGAAAGGGACTGCCTATGAGCCCAGGATCTTGCCCTCAGGAAGAAAGGCCACTAGGTaGAGGAAAAGGGGGCGAAGG +
Preference number: 2 (lower is better)
Translates to: QDKEVKGTAYEPRILPSGRKATR*RKRGRR
Trigger: CCTTCGCCCCCTTTTCCTGCACCTAGTGGCCTTTCT...TCCTGAGGGCAAGATCCTGGGCTCATAGGCAGTCCCTTTCACTTCCTTGTCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR GCA 90 bp GCCATAGGGTATCTGGAGAAATGTACACAGGCAGCCTCAGCTGGAGTCATGCGAAGCTCCTGCAACCTCTaGCTCCTGCGTTCAAGCGAT +
Preference number: 2 (lower is better)
Translates to: AIGYLEKCTQAASAGVMRSSCNL*LLRSSD
Trigger: ATCGCTTGAACGCAGGAGGCAGAGGTTGCAGGAGCT...TCGCATGACTCCAGCTGAGGCTGCCTGTGTACATTTCTCCAGATACCCTATGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR GCA 90 bp CCAGACCCATTCCCTTCTCAGATCACACTCTATCCAGACTGCTGTACAGTGCGGACAAGGGCTCAGAGGTaGTGTACAGGAGGAGCCAGT +
Preference number: 2 (lower is better)
Translates to: PDPFPSQITLYPDCCTVRTRAQR*CTGGAS
Trigger: ACTGGCTCCTCCTGTACAGCACCTCTGAGCCCTTGT...CCGCACTGTACAGCAGTCTGGATAGAGTGTGATCTGAGAAGGGAATGGGTCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR GCA 90 bp GGTATCTGGAGAAATGTACACAGGCAGCCTCAGCTGGAGTCATGCGAGCCAACTACAAGGGCTCAGAGGTaGTGTACAGGAGGAGCCAGT +
Preference number: 2 (lower is better)
Translates to: GIWRNVHRQPQLESCEPTTRAQR*CTGGAS
Trigger: ACTGGCTCCTCCTGTACAGCACCTCTGAGCCCTTGT...AGTTGGCTCGCATGACTCCAGCTGAGGCTGCCTGTGTACATTTCTCCAGATACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR CCA 90 bp TGCTGTACAGGAGGAGCCAGTCTTCCAACAGTACACAAAAGCACGCTGTCCTCTCCCAAGAGAAAGAGGTaGGTACCTGCATGCCCCCAG +
Preference number: 2 (lower is better)
Translates to: CCTGGASLPTVHKSTLSSPKRKR*VPACPQ
Trigger: CTGGGGGCATGCAGGTACCCACCTCTTTCTCTTGGG...AGAGGACAGCGTGCTTTTGTGTACTGTTGGAAGACTGGCTCCTCCTGTACAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR CCA 90 bp CAGGGCTTAGACAGACTGGATGAAGCGCCCCATTTTGCCACATTGTCTCCAGGCGCAACGTCCGCCTCCTaGGTTCAAGTAATTCTCCTG +
Preference number: 2 (lower is better)
Translates to: QGLDRLDEAPHFATLSPGATSAS*VQVILL
Trigger: CAGGAGAATTACTTGAACCCAGGAGGCGGACGTTGC...GCCTGGAGACAATGTGGCAAAATGGGGCGCTTCATCCAGTCTGTCTAAGCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR CAA 90 bp CCAGACCAAAGGCACAGGGATGAGAAACATGGCAGTGAGGACTCCTaGCAACAAGAACACGAACATTCAGCAGGGAAGGAGGGAAGCAGC +
Preference number: 2 (lower is better)
Translates to: PDQRHRDEKHGSEDS*QQEHEHSAGKEGSS
Trigger: GCTGCTTCCCTCCTTCCCTGCTGAATGTTCGTGTTCTTGTTGCAAGGAGTCCTCACTGCCATGTTTCTCATCCCTGTGCCTTTGGTCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466756.2
3UTR-3UTR GCA 90 bp GAAGGGCTGGAAGGACTTCCAGAGCTGCCCCAGACCAAAGGCACAGGGATGAGAGCAGTGAGGACTCCTTaGAACAAGAACACGAACATT +
Preference number: 2 (lower is better)
Translates to: EGLEGLPELPQTKGTGMRAVRTP*NKNTNI
Trigger: AATGTTCGTGTTCTTGTTGCAAGGAGTCCTCACTGC...TCTCATCCCTGTGCCTTTGGTCTGGGGCAGCTCTGGAAGTCCTTCCAGCCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466756.2
3UTR-3UTR GCA 90 bp CAGGGCTTAGACAGACTGGATGAAGCGCCCCATTTTGCCACATTGTCTCCAGGCCTCAGCCTCCTGAAGTaGTGGGATTACAAGCATGAG +
Preference number: 2 (lower is better)
Translates to: QGLDRLDEAPHFATLSPGLSLLK*WDYKHE
Trigger: CTCATGCTTGTAATCCCAGCACTTCAGGAGGCTGAG...GCCTGGAGACAATGTGGCAAAATGGGGCGCTTCATCCAGTCTGTCTAAGCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR GCA 90 bp CAAGACAAGGAAGTGAAAGGGACTGCCTATGAGCCCAGGATCTTGCCCTCAGGAAGGCACACACCACCTTaGCTGGCCAAGCAAGCATAT +
Preference number: 2 (lower is better)
Translates to: QDKEVKGTAYEPRILPSGRHTPP*LAKQAY
Trigger: ATATGCTTGCTTGGCCAGGCAAGGTGGTGTGTGCCT...TCCTGAGGGCAAGATCCTGGGCTCATAGGCAGTCCCTTTCACTTCCTTGTCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR GCA 90 bp GGTATCTGGAGAAATGTACACAGGCAGCCTCAGCTGGAGTCATGCGAGCCAACTAGGCACACACCACCTTaGCTGGCCAAGCAAGCATAT +
Preference number: 2 (lower is better)
Translates to: GIWRNVHRQPQLESCEPTRHTPP*LAKQAY
Trigger: ATATGCTTGCTTGGCCAGGCAAGGTGGTGTGTGCCT...AGTTGGCTCGCATGACTCCAGCTGAGGCTGCCTGTGTACATTTCTCCAGATACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR GCA 90 bp CAAGACAAGGAAGTGAAAGGGACTGCCTATGAGCCCAGGATCTTGCCCTCAGGACAGACTGCTGTACAGTaGGGCCCAAAGCTGGAATTC +
Preference number: 2 (lower is better)
Translates to: QDKEVKGTAYEPRILPSGQTAVQ*GPKLEF
Trigger: GAATTCCAGCTTTGGGCCGCACTGTACAGCAGTCTG...TCCTGAGGGCAAGATCCTGGGCTCATAGGCAGTCCCTTTCACTTCCTTGTCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR GCA 90 bp CAGGGCTTAGACAGACTGGATGAAGCGCCCCATTTTGCCACATTGTCTCCAGGCACACTCTATCCAGACTaGTGTACAGTGCGGCCCAAA +
Preference number: 2 (lower is better)
Translates to: QGLDRLDEAPHFATLSPGTLYPD*CTVRPK
Trigger: TTTGGGCCGCACTGTACAGCAGTCTGGATAGAGTGT...GCCTGGAGACAATGTGGCAAAATGGGGCGCTTCATCCAGTCTGTCTAAGCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR GCA 90 bp CCCAGGTGGGTGTTGGGCGGAAAAGGTCTGCCCAAAACACTGAATGCCGTCCAGGTAAAGAATCACACCTaGACAGTCCTTAGCAGTGCA +
Preference number: 2 (lower is better)
Translates to: PRWVLGGKGLPKTLNAVQVKNHT*TVLSSA
Trigger: TGCACTGCTAAGGACTGTGCAGGTGTGATTCTTTAC...CTGGACGGCATTCAGTGTTTTGGGCAGACCTTTTCCGCCCAACACCCACCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481262.6
3UTR-3UTR CCA 90 bp CCAGACCCATTCCCTTCTCAGATCACACTCTATCCAGACTGCTGTACAGTGCGGGCAACGTCCGCCTCCTaGGTTCAAGTAATTCTCCTG +
Preference number: 2 (lower is better)
Translates to: PDPFPSQITLYPDCCTVRATSAS*VQVILL
Trigger: CAGGAGAATTACTTGAACCCAGGAGGCGGACGTTGC...CCGCACTGTACAGCAGTCTGGATAGAGTGTGATCTGAGAAGGGAATGGGTCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR CCA 90 bp GCCATAGGGTATCTGGAGAAATGTACACAGGCAGCCTCAGCTGGAGTCATGCGATGTTGGTCGTCAGGCTaGTCTCGAACTCCTGACCTT +
Preference number: 2 (lower is better)
Translates to: AIGYLEKCTQAASAGVMRCWSSG*SRTPDL
Trigger: AAGGTCAGGAGTTCGAGACCAGCCTGACGACCAACA...TCGCATGACTCCAGCTGAGGCTGCCTGTGTACATTTCTCCAGATACCCTATGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR CCA 90 bp TGGGAAAGGGAGGCTGAGACCTCTCTCCTAAGGGCTGATTTTACCTTCCTGTCCTGTTGGTCGTCAGGCTaGTCTCGAACTCCTGACCTT +
Preference number: 2 (lower is better)
Translates to: WEREAETSLLRADFTFLSCWSSG*SRTPDL
Trigger: AAGGTCAGGAGTTCGAGACCAGCCTGACGACCAACA...GGACAGGAAGGTAAAATCAGCCCTTAGGAGAGAGGTCTCAGCCTCCCTTTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR CCA 90 bp GGGTATCTGGAGAAATGTACACAGGCAGCCTCAGCTGGAGTCATGCGAGCCAACAGTCTTCTGTGTAACTaGGATTACAGGCGCGTGCCA +
Preference number: 2 (lower is better)
Translates to: GYLEKCTQAASAGVMRANSLLCN*DYRRVP
Trigger: TGGCACGCGCCTGTAATCCCAGTTACACAGAAGACT...GTTGGCTCGCATGACTCCAGCTGAGGCTGCCTGTGTACATTTCTCCAGATACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR CCA 90 bp AGGAAGCAGCGGCAAGTAGATTGCTTCTCCCCAGATAGGTTTGTTTCACAATATTCACACGGCCAGGACTaGATGGTGCCCGTGGCAGGG +
Preference number: 2 (lower is better)
Translates to: RKQRQVDCFSPDRFVSQYSHGQD*MVPVAG
Trigger: CCCTGCCACGGGCACCATCCAGTCCTGGCCGTGTGA...ATATTGTGAAACAAACCTATCTGGGGAGAAGCAATCTACTTGCCGCTGCTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR CCA 90 bp CAAGACAAGGAAGTGAAAGGGACTGCCTATGAGCCCAGGATCTTGCCCTCAGGATCCAAGGACACAAGCTaGATCCAGACAGGAAGCAGC +
Preference number: 2 (lower is better)
Translates to: QDKEVKGTAYEPRILPSGSKDTS*IQTGSS
Trigger: GCTGCTTCCTGTCTGGATCCAGCTTGTGTCCTTGGA...TCCTGAGGGCAAGATCCTGGGCTCATAGGCAGTCCCTTTCACTTCCTTGTCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR CCA 90 bp AAGCGCCGAGTACCAGTTTCAGCAAAGGTGCAGAGCTGTGGTATAGGGGTGAGGTGCATCAACTGGAAGTaGCCGATCTTCTGGCCAAAG +
Preference number: 2 (lower is better)
Translates to: KRRVPVSAKVQSCGIGVRCINWK*PIFWPK
Trigger: CTTTGGCCAGAAGATCGGCCACTTCCAGTTGATGCA...CCTCACCCCTATACCACAGCTCTGCACCTTTGCTGAAACTGGTACTCGGCGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481262.6
3UTR-3UTR GCA 90 bp CCAGACCCATTCCCTTCTCAGATCACACTCTATCCAGACTGCTGTACAGTGCGGGCCATGATTCTGCTGTaGTTGAGCAGAGAGATCTCC +
Preference number: 2 (lower is better)
Translates to: PDPFPSQITLYPDCCTVRAMILL*LSREIS
Trigger: GGAGATCTCTCTGCTCAAGCACAGCAGAATCATGGC...CCGCACTGTACAGCAGTCTGGATAGAGTGTGATCTGAGAAGGGAATGGGTCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR GCA 90 bp GGTATCTGGAGAAATGTACACAGGCAGCCTCAGCTGGAGTCATGCGAGCCAACTCTCAGCCTCCTGAAGTaGTGGGATTACAAGCATGAG +
Preference number: 2 (lower is better)
Translates to: GIWRNVHRQPQLESCEPTLSLLK*WDYKHE
Trigger: CTCATGCTTGTAATCCCAGCACTTCAGGAGGCTGAG...AGTTGGCTCGCATGACTCCAGCTGAGGCTGCCTGTGTACATTTCTCCAGATACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR GCA 90 bp ACCCAGACCCATTCCCTTCTCAGATCACACTCTATCCAGACTGCTGTACAGTGCAGGCACACACCACCTTaGCTGGCCAAGCAAGCATAT +
Preference number: 2 (lower is better)
Translates to: TQTHSLLRSHSIQTAVQCRHTPP*LAKQAY
Trigger: ATATGCTTGCTTGGCCAGGCAAGGTGGTGTGTGCCT...GCACTGTACAGCAGTCTGGATAGAGTGTGATCTGAGAAGGGAATGGGTCTGGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR GCA 90 bp GGTATCTGGAGAAATGTACACAGGCAGCCTCAGCTGGAGTCATGCGAGCCAACTGTTCAAGCAATTCTCTaGCTCAGCCTCCTGAGTAGC +
Preference number: 2 (lower is better)
Translates to: GIWRNVHRQPQLESCEPTVQAIL*LSLLSS
Trigger: GCTACTCAGGAGGCTGAGGCAGAGAATTGCTTGAAC...AGTTGGCTCGCATGACTCCAGCTGAGGCTGCCTGTGTACATTTCTCCAGATACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR GCA 90 bp CAAGACAAGGAAGTGAAAGGGACTGCCTATGAGCCCAGGATCTTGCCCTCAGGAGTTCAAGCAATTCTCTaGCTCAGCCTCCTGAGTAGC +
Preference number: 2 (lower is better)
Translates to: QDKEVKGTAYEPRILPSGVQAIL*LSLLSS
Trigger: GCTACTCAGGAGGCTGAGGCAGAGAATTGCTTGAAC...TCCTGAGGGCAAGATCCTGGGCTCATAGGCAGTCCCTTTCACTTCCTTGTCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR GCA 90 bp TGGGAAAGGGAGGCTGAGACCTCTCTCCTAAGGGCTGATTTTACCTTCCTGTCCGTTCAAGCAATTCTCTaGCTCAGCCTCCTGAGTAGC +
Preference number: 2 (lower is better)
Translates to: WEREAETSLLRADFTFLSVQAIL*LSLLSS
Trigger: GCTACTCAGGAGGCTGAGGCAGAGAATTGCTTGAAC...GGACAGGAAGGTAAAATCAGCCCTTAGGAGAGAGGTCTCAGCCTCCCTTTCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR GCA 90 bp CAGGGCTTAGACAGACTGGATGAAGCGCCCCATTTTGCCACATTGTCTCCAGGCCAGCGGCAAGTAGATTaGTTCTCCCCAGATAGGTTT +
Preference number: 2 (lower is better)
Translates to: QGLDRLDEAPHFATLSPGQRQVD*FSPDRF
Trigger: AAACCTATCTGGGGAGAAGCAATCTACTTGCCGCTG...GCCTGGAGACAATGTGGCAAAATGGGGCGCTTCATCCAGTCTGTCTAAGCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR CCA 90 bp TGGGAAAGGGAGGCTGAGACCTCTCTCCTAAGGGCTGATTTTACCTTCCTGTCCAGTCTTCTGTGTAACTaGGATTACAGGCGCGTGCCA +
Preference number: 2 (lower is better)
Translates to: WEREAETSLLRADFTFLSSLLCN*DYRRVP
Trigger: TGGCACGCGCCTGTAATCCCAGTTACACAGAAGACT...GGACAGGAAGGTAAAATCAGCCCTTAGGAGAGAGGTCTCAGCCTCCCTTTCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR CCA 90 bp AGGAAGCAGCGGCAAGTAGATTGCTTCTCCCCAGATAGGTTTGTTTCACAATATCCAGTCAGCTGTGGGTaGTCACACGGCCAGGACTGG +
Preference number: 2 (lower is better)
Translates to: RKQRQVDCFSPDRFVSQYPVSCG*SHGQDW
Trigger: CCAGTCCTGGCCGTGTGACCACCCACAGCTGACTGG...ATATTGTGAAACAAACCTATCTGGGGAGAAGCAATCTACTTGCCGCTGCTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR CCA 90 bp CCAGACCCATTCCCTTCTCAGATCACACTCTATCCAGACTGCTGTACAGTGCGGCATGAAAGAACGGGCTaGAGGACAGGAATAGGACCT +
Preference number: 2 (lower is better)
Translates to: PDPFPSQITLYPDCCTVRHERTG*RTGIGP
Trigger: AGGTCCTATTCCTGTCCTCCAGCCCGTTCTTTCATG...CCGCACTGTACAGCAGTCTGGATAGAGTGTGATCTGAGAAGGGAATGGGTCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR CCA 90 bp CAAGACAAGGAAGTGAAAGGGACTGCCTATGAGCCCAGGATCTTGCCCTCAGGACAGGATAGGTGCTGCTaGGCTGAGAACCAAGAAAAC +
Preference number: 2 (lower is better)
Translates to: QDKEVKGTAYEPRILPSGQDRCC*AENQEN
Trigger: GTTTTCTTGGTTCTCAGCCCAGCAGCACCTATCCTG...TCCTGAGGGCAAGATCCTGGGCTCATAGGCAGTCCCTTTCACTTCCTTGTCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR CCA 90 bp CCTGCCAAGGAGCTCTGTCCCAAAGACGTTGGAGAACATAGAAGGATTTTGAGGTCCTTAGCAGTGCAATaGCCCTCATCGCAGGCCTTG +
Preference number: 2 (lower is better)
Translates to: PAKELCPKDVGEHRRILRSLAVQ*PSSQAL
Trigger: CAAGGCCTGCGATGAGGGCCATTGCACTGCTAAGGA...CCTCAAAATCCTTCTATGTTCTCCAACGTCTTTGGGACAGAGCTCCTTGGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481262.6
3UTR CAA 90 bp GTACCAAGTTCCAATTCATGGAGAGGGGCCATGATTCTGCTGTGCTaGAGCAGAGAGATCTCCTTGCCAGAGCCTCACCCAAGAGAAAGA +
Preference number: 2 (lower is better)
Translates to: VPSSNSWRGAMILLC*SREISLPEPHPRER
Trigger: TCTTTCTCTTGGGTGAGGCTCTGGCAAGGAGATCTCTCTGCTCAAGCACAGCAGAATCATGGCCCCTCTCCATGAATTGGAACTTGGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR TCA 90 bp AGCAAGATGGCCCTTTTAGTCACATTCATCTCCAACATAGCAGGGAGCAAGACACTGGTCTTGAACTCCTaGCCTCGTGATCCACCTGCC +
Preference number: 2 (lower is better)
Translates to: SKMALLVTFISNIAGSKTLVLNS*PRDPPA
Trigger: GGCAGGTGGATCACGAGGTCAGGAGTTCAAGACCAG...TGTCTTGCTCCCTGCTATGTTGGAGATGAATGTGACTAAAAGGGCCATCTTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR GCA 90 bp TGCTGTACAGGAGGAGCCAGTCTTCCAACAGTACACAAAAGCACGCTGTCCTCTGCCATGATTCTGCTGTaGTTGAGCAGAGAGATCTCC +
Preference number: 2 (lower is better)
Translates to: CCTGGASLPTVHKSTLSSAMILL*LSREIS
Trigger: GGAGATCTCTCTGCTCAAGCACAGCAGAATCATGGC...AGAGGACAGCGTGCTTTTGTGTACTGTTGGAAGACTGGCTCCTCCTGTACAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR GCA 90 bp TGCTGTACAGGAGGAGCCAGTCTTCCAACAGTACACAAAAGCACGCTGTCCTCTCTCAGCCTCCTGAAGTaGTGGGATTACAAGCATGAG +
Preference number: 2 (lower is better)
Translates to: CCTGGASLPTVHKSTLSSLSLLK*WDYKHE
Trigger: CTCATGCTTGTAATCCCAGCACTTCAGGAGGCTGAG...AGAGGACAGCGTGCTTTTGTGTACTGTTGGAAGACTGGCTCCTCCTGTACAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR GCA 90 bp AGGAAGCAGCGGCAAGTAGATTGCTTCTCCCCAGATAGGTTTGTTTCACAATATCGCGATCTCAGCTCCTaGAACCTCTGCCTCCTGCGT +
Preference number: 2 (lower is better)
Translates to: RKQRQVDCFSPDRFVSQYRDLSS*NLCLLR
Trigger: ACGCAGGAGGCAGAGGTTGCAGGAGCTGAGATCGCG...ATATTGTGAAACAAACCTATCTGGGGAGAAGCAATCTACTTGCCGCTGCTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR GCA 90 bp CAAGACAAGGAAGTGAAAGGGACTGCCTATGAGCCCAGGATCTTGCCCTCAGGACAGCGGCAAGTAGATTaGTTCTCCCCAGATAGGTTT +
Preference number: 2 (lower is better)
Translates to: QDKEVKGTAYEPRILPSGQRQVD*FSPDRF
Trigger: AAACCTATCTGGGGAGAAGCAATCTACTTGCCGCTG...TCCTGAGGGCAAGATCCTGGGCTCATAGGCAGTCCCTTTCACTTCCTTGTCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR CCA 90 bp GCCATAGGGTATCTGGAGAAATGTACACAGGCAGCCTCAGCTGGAGTCATGCGACCAAGTTCCAATTCATaGAGAGGGGCCATGATTCTG +
Preference number: 2 (lower is better)
Translates to: AIGYLEKCTQAASAGVMRPSSNS*RGAMIL
Trigger: CAGAATCATGGCCCCTCTCCATGAATTGGAACTTGG...TCGCATGACTCCAGCTGAGGCTGCCTGTGTACATTTCTCCAGATACCCTATGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR CCA 90 bp AGCAAGATGGCCCTTTTAGTCACATTCATCTCCAACATAGCAGGGAGCAAGACACAGGCTGGAGTGCAATaGCACAAGCTCGGCTCACTG +
Preference number: 2 (lower is better)
Translates to: SKMALLVTFISNIAGSKTQAGVQ*HKLGSL
Trigger: CAGTGAGCCGAGCTTGTGCCATTGCACTCCAGCCTG...TGTCTTGCTCCCTGCTATGTTGGAGATGAATGTGACTAAAAGGGCCATCTTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR CCA 90 bp ACCCAGACCCATTCCCTTCTCAGATCACACTCTATCCAGACTGCTGTACAGTGCAGTCTTCTGTGTAACTaGGATTACAGGCGCGTGCCA +
Preference number: 2 (lower is better)
Translates to: TQTHSLLRSHSIQTAVQCSLLCN*DYRRVP
Trigger: TGGCACGCGCCTGTAATCCCAGTTACACAGAAGACT...GCACTGTACAGCAGTCTGGATAGAGTGTGATCTGAGAAGGGAATGGGTCTGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR CCA 90 bp AGCAAGATGGCCCTTTTAGTCACATTCATCTCCAACATAGCAGGGAGCAAGACAACAGGCAGCCTCAGCTaGAGTCATGCGAGCCAACTC +
Preference number: 2 (lower is better)
Translates to: SKMALLVTFISNIAGSKTTGSLS*SHASQL
Trigger: GAGTTGGCTCGCATGACTCCAGCTGAGGCTGCCTGT...TGTCTTGCTCCCTGCTATGTTGGAGATGAATGTGACTAAAAGGGCCATCTTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR CCA 90 bp CAGGGCTTAGACAGACTGGATGAAGCGCCCCATTTTGCCACATTGTCTCCAGGCTCCTTTAAAACTCACTaGGAGATCTGGGAAAGGGAG +
Preference number: 2 (lower is better)
Translates to: QGLDRLDEAPHFATLSPGSFKTH*EIWERE
Trigger: CTCCCTTTCCCAGATCTCCCAGTGAGTTTTAAAGGA...GCCTGGAGACAATGTGGCAAAATGGGGCGCTTCATCCAGTCTGTCTAAGCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR CCA 90 bp AGCAAGATGGCCCTTTTAGTCACATTCATCTCCAACATAGCAGGGAGCAAGACAGCTAGGAACAGCACTTaGCTGCAGGCCAGGACCAAG +
Preference number: 2 (lower is better)
Translates to: SKMALLVTFISNIAGSKTARNST*LQARTK
Trigger: CTTGGTCCTGGCCTGCAGCCAAGTGCTGTTCCTAGC...TGTCTTGCTCCCTGCTATGTTGGAGATGAATGTGACTAAAAGGGCCATCTTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR CAA 90 bp GCCAAGGAGCTCTGTCCCAAAGACGTTGGAGAACATAGAAGGATTTaGAGGAAAGGAAGCTTCTGGTCTGAGATCCAAGAGGCGAGTTGG +
Preference number: 2 (lower is better)
Translates to: AKELCPKDVGEHRRI*RKGSFWSEIQEASW
Trigger: CCAACTCGCCTCTTGGATCTCAGACCAGAAGCTTCCTTTCCTCAAAATCCTTCTATGTTCTCCAACGTCTTTGGGACAGAGCTCCTTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481262.6
ENST00000491554.6
3UTR-3UTR TCA 90 bp AGGAAGCAGCGGCAAGTAGATTGCTTCTCCCCAGATAGGTTTGTTTCACAATATACTCCTGACTGCAAGTaGTCCACCTGCCTTGGCCTC +
Preference number: 2 (lower is better)
Translates to: RKQRQVDCFSPDRFVSQYTPDCK*STCLGL
Trigger: GAGGCCAAGGCAGGTGGATCACTTGCAGTCAGGAGT...ATATTGTGAAACAAACCTATCTGGGGAGAAGCAATCTACTTGCCGCTGCTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR GCA 90 bp AGCAAGATGGCCCTTTTAGTCACATTCATCTCCAACATAGCAGGGAGCAAGACAAGCTCCTGCAACCTCTaGCTCCTGCGTTCAAGCGAT +
Preference number: 2 (lower is better)
Translates to: SKMALLVTFISNIAGSKTSSCNL*LLRSSD
Trigger: ATCGCTTGAACGCAGGAGGCAGAGGTTGCAGGAGCT...TGTCTTGCTCCCTGCTATGTTGGAGATGAATGTGACTAAAAGGGCCATCTTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR GCA 90 bp CAAGACAAGGAAGTGAAAGGGACTGCCTATGAGCCCAGGATCTTGCCCTCAGGAGAACACCCCCATTTTTaGCATGAGCAGATCTGGATT +
Preference number: 2 (lower is better)
Translates to: QDKEVKGTAYEPRILPSGEHPHF*HEQIWI
Trigger: AATCCAGATCTGCTCATGGCAAAAATGGGGGTGTTC...TCCTGAGGGCAAGATCCTGGGCTCATAGGCAGTCCCTTTCACTTCCTTGTCTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR CCA 90 bp AGGAAGCAGCGGCAAGTAGATTGCTTCTCCCCAGATAGGTTTGTTTCACAATATACAGGCAGCCTCAGCTaGAGTCATGCGAGCCAACTC +
Preference number: 2 (lower is better)
Translates to: RKQRQVDCFSPDRFVSQYTGSLS*SHASQL
Trigger: GAGTTGGCTCGCATGACTCCAGCTGAGGCTGCCTGT...ATATTGTGAAACAAACCTATCTGGGGAGAAGCAATCTACTTGCCGCTGCTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR CCA 90 bp AGCAAGATGGCCCTTTTAGTCACATTCATCTCCAACATAGCAGGGAGCAAGACAGGAACTCGGAAGGGGTaGAACAACCCAGACCCATTC +
Preference number: 2 (lower is better)
Translates to: SKMALLVTFISNIAGSKTGTRKG*NNPDPF
Trigger: GAATGGGTCTGGGTTGTTCCACCCCTTCCGAGTTCC...TGTCTTGCTCCCTGCTATGTTGGAGATGAATGTGACTAAAAGGGCCATCTTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR TCA 90 bp GGGTATCTGGAGAAATGTACACAGGCAGCCTCAGCTGGAGTCATGCGAGCCAACCCCCAGAAAAGAGACTaGAAGTTGAATTTGCCTTAT +
Preference number: 2 (lower is better)
Translates to: GYLEKCTQAASAGVMRANPQKRD*KLNLPY
Trigger: ATAAGGCAAATTCAACTTTCAGTCTCTTTTCTGGGG...GTTGGCTCGCATGACTCCAGCTGAGGCTGCCTGTGTACATTTCTCCAGATACCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR GCA 90 bp AGGAAGCAGCGGCAAGTAGATTGCTTCTCCCCAGATAGGTTTGTTTCACAATATAGAAAGGCCACTAGGTaGAGGAAAAGGGGGCGAAGG +
Preference number: 2 (lower is better)
Translates to: RKQRQVDCFSPDRFVSQYRKATR*RKRGRR
Trigger: CCTTCGCCCCCTTTTCCTGCACCTAGTGGCCTTTCT...ATATTGTGAAACAAACCTATCTGGGGAGAAGCAATCTACTTGCCGCTGCTTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR GCA 90 bp CAAGACAAGGAAGTGAAAGGGACTGCCTATGAGCCCAGGATCTTGCCCTCAGGATGGCAGCAGCCACTGTaGAGTTATAACAAAATTAGC +
Preference number: 2 (lower is better)
Translates to: QDKEVKGTAYEPRILPSGWQQPL*SYNKIS
Trigger: GCTAATTTTGTTATAACTGCACAGTGGCTGCTGCCA...TCCTGAGGGCAAGATCCTGGGCTCATAGGCAGTCCCTTTCACTTCCTTGTCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR GCA 90 bp AGCAAGATGGCCCTTTTAGTCACATTCATCTCCAACATAGCAGGGAGCAAGACACAGACTGCTGTACAGTaGGGCCCAAAGCTGGAATTC +
Preference number: 2 (lower is better)
Translates to: SKMALLVTFISNIAGSKTQTAVQ*GPKLEF
Trigger: GAATTCCAGCTTTGGGCCGCACTGTACAGCAGTCTG...TGTCTTGCTCCCTGCTATGTTGGAGATGAATGTGACTAAAAGGGCCATCTTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR CCA 90 bp CAACAATCCCCAGACAATATGCTTCCTGCTGAGTCCATTTTAAATCACACAACACTGCTGTGGGCAGGGTaGGAAAGCCGCCACATCTCT +
Preference number: 2 (lower is better)
Translates to: QQSPDNMLPAESILNHTTLLWAG*ESRHIS
Trigger: AGAGATGTGGCGGCTTTCCCACCCTGCCCACAGCAG...TGTTGTGTGATTTAAAATGGACTCAGCAGGAAGCATATTGTCTGGGGATTGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR CCA 90 bp AGCAAGATGGCCCTTTTAGTCACATTCATCTCCAACATAGCAGGGAGCAAGACATGTTGGTCGTCAGGCTaGTCTCGAACTCCTGACCTT +
Preference number: 2 (lower is better)
Translates to: SKMALLVTFISNIAGSKTCWSSG*SRTPDL
Trigger: AAGGTCAGGAGTTCGAGACCAGCCTGACGACCAACA...TGTCTTGCTCCCTGCTATGTTGGAGATGAATGTGACTAAAAGGGCCATCTTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR CCA 90 bp AGCAAGATGGCCCTTTTAGTCACATTCATCTCCAACATAGCAGGGAGCAAGACATCCAAGGACACAAGCTaGATCCAGACAGGAAGCAGC +
Preference number: 2 (lower is better)
Translates to: SKMALLVTFISNIAGSKTSKDTS*IQTGSS
Trigger: GCTGCTTCCTGTCTGGATCCAGCTTGTGTCCTTGGA...TGTCTTGCTCCCTGCTATGTTGGAGATGAATGTGACTAAAAGGGCCATCTTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR CCA 90 bp ACCCAGACCCATTCCCTTCTCAGATCACACTCTATCCAGACTGCTGTACAGTGCTCCTTTAAAACTCACTaGGAGATCTGGGAAAGGGAG +
Preference number: 2 (lower is better)
Translates to: TQTHSLLRSHSIQTAVQCSFKTH*EIWERE
Trigger: CTCCCTTTCCCAGATCTCCCAGTGAGTTTTAAAGGA...GCACTGTACAGCAGTCTGGATAGAGTGTGATCTGAGAAGGGAATGGGTCTGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR TCA 90 bp TGGGAAAGGGAGGCTGAGACCTCTCTCCTAAGGGCTGATTTTACCTTCCTGTCCCCCCAGAAAAGAGACTaGAAGTTGAATTTGCCTTAT +
Preference number: 2 (lower is better)
Translates to: WEREAETSLLRADFTFLSPQKRD*KLNLPY
Trigger: ATAAGGCAAATTCAACTTTCAGTCTCTTTTCTGGGG...GGACAGGAAGGTAAAATCAGCCCTTAGGAGAGAGGTCTCAGCCTCCCTTTCCCA
48% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR GCA 90 bp AGCAAGATGGCCCTTTTAGTCACATTCATCTCCAACATAGCAGGGAGCAAGACAGCCATGATTCTGCTGTaGTTGAGCAGAGAGATCTCC +
Preference number: 2 (lower is better)
Translates to: SKMALLVTFISNIAGSKTAMILL*LSREIS
Trigger: GGAGATCTCTCTGCTCAAGCACAGCAGAATCATGGC...TGTCTTGCTCCCTGCTATGTTGGAGATGAATGTGACTAAAAGGGCCATCTTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR CCA 90 bp AGGAAGCAGCGGCAAGTAGATTGCTTCTCCCCAGATAGGTTTGTTTCACAATATAGCCTCCTGAGTAGCTaGGATTACAGACGTGCACCA +
Preference number: 2 (lower is better)
Translates to: RKQRQVDCFSPDRFVSQYSLLSS*DYRRAP
Trigger: TGGTGCACGTCTGTAATCCCAGCTACTCAGGAGGCT...ATATTGTGAAACAAACCTATCTGGGGAGAAGCAATCTACTTGCCGCTGCTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR CCA 90 bp ACCCAGACCCATTCCCTTCTCAGATCACACTCTATCCAGACTGCTGTACAGTGCTGCCATGAGCAGATCTaGATTCTAGTTCGTTTTGAC +
Preference number: 2 (lower is better)
Translates to: TQTHSLLRSHSIQTAVQCCHEQI*ILVRFD
Trigger: GTCAAAACGAACTAGAATCCAGATCTGCTCATGGCA...GCACTGTACAGCAGTCTGGATAGAGTGTGATCTGAGAAGGGAATGGGTCTGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR CCA 90 bp AGCAAGATGGCCCTTTTAGTCACATTCATCTCCAACATAGCAGGGAGCAAGACACCAGTTCCCTCTTTTTaGAACTCGGAAGGGGTGGAA +
Preference number: 2 (lower is better)
Translates to: SKMALLVTFISNIAGSKTPVPSF*NSEGVE
Trigger: TTCCACCCCTTCCGAGTTCCAAAAAGAGGGAACTGG...TGTCTTGCTCCCTGCTATGTTGGAGATGAATGTGACTAAAAGGGCCATCTTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR TCA 90 bp CCAGACCCATTCCCTTCTCAGATCACACTCTATCCAGACTGCTGTACAGTGCGGTTTTCTATTTTTAGTTaGGGCGAGGTTTCCACATGT +
Preference number: 2 (lower is better)
Translates to: PDPFPSQITLYPDCCTVRFSIFS*GEVSTC
Trigger: ACATGTGGAAACCTCGCCTCAACTAAAAATAGAAAA...CCGCACTGTACAGCAGTCTGGATAGAGTGTGATCTGAGAAGGGAATGGGTCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR TCA 90 bp TGGGAAAGGGAGGCTGAGACCTCTCTCCTAAGGGCTGATTTTACCTTCCTGTCCTTTTCTATTTTTAGTTaGGGCGAGGTTTCCACATGT +
Preference number: 2 (lower is better)
Translates to: WEREAETSLLRADFTFLSFSIFS*GEVSTC
Trigger: ACATGTGGAAACCTCGCCTCAACTAAAAATAGAAAA...GGACAGGAAGGTAAAATCAGCCCTTAGGAGAGAGGTCTCAGCCTCCCTTTCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR TCA 90 bp AGCAAGATGGCCCTTTTAGTCACATTCATCTCCAACATAGCAGGGAGCAAGACACCCCCATTTTTGCCATaGGCAGATCTGGATTCTAGT +
Preference number: 2 (lower is better)
Translates to: SKMALLVTFISNIAGSKTPPFLP*ADLDSS
Trigger: ACTAGAATCCAGATCTGCTCATGGCAAAAATGGGGG...TGTCTTGCTCCCTGCTATGTTGGAGATGAATGTGACTAAAAGGGCCATCTTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR CCA 90 bp AGCAAGATGGCCCTTTTAGTCACATTCATCTCCAACATAGCAGGGAGCAAGACACCAAGTTCCAATTCATaGAGAGGGGCCATGATTCTG +
Preference number: 2 (lower is better)
Translates to: SKMALLVTFISNIAGSKTPSSNS*RGAMIL
Trigger: CAGAATCATGGCCCCTCTCCATGAATTGGAACTTGG...TGTCTTGCTCCCTGCTATGTTGGAGATGAATGTGACTAAAAGGGCCATCTTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR CCA 90 bp TGGGAAAGGGAGGCTGAGACCTCTCTCCTAAGGGCTGATTTTACCTTCCTGTCCCTTATCCAAAATGCTTaGAACCACAAGTGTTTCAGA +
Preference number: 2 (lower is better)
Translates to: WEREAETSLLRADFTFLSLIQNA*NHKCFR
Trigger: TCTGAAACACTTGTGGTTCCAAGCATTTTGGATAAG...GGACAGGAAGGTAAAATCAGCCCTTAGGAGAGAGGTCTCAGCCTCCCTTTCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR TCA 90 bp TGCTGTACAGGAGGAGCCAGTCTTCCAACAGTACACAAAAGCACGCTGTCCTCTTTTTCTATTTTTAGTTaGGGCGAGGTTTCCACATGT +
Preference number: 2 (lower is better)
Translates to: CCTGGASLPTVHKSTLSSFSIFS*GEVSTC
Trigger: ACATGTGGAAACCTCGCCTCAACTAAAAATAGAAAA...AGAGGACAGCGTGCTTTTGTGTACTGTTGGAAGACTGGCTCCTCCTGTACAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR TCA 90 bp ACCCAGACCCATTCCCTTCTCAGATCACACTCTATCCAGACTGCTGTACAGTGCTTTTCTATTTTTAGTTaGGGCGAGGTTTCCACATGT +
Preference number: 2 (lower is better)
Translates to: TQTHSLLRSHSIQTAVQCFSIFS*GEVSTC
Trigger: ACATGTGGAAACCTCGCCTCAACTAAAAATAGAAAA...GCACTGTACAGCAGTCTGGATAGAGTGTGATCTGAGAAGGGAATGGGTCTGGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR CCA 90 bp AGGAAGCAGCGGCAAGTAGATTGCTTCTCCCCAGATAGGTTTGTTTCACAATATCCAAGTTCCAATTCATaGAGAGGGGCCATGATTCTG +
Preference number: 2 (lower is better)
Translates to: RKQRQVDCFSPDRFVSQYPSSNS*RGAMIL
Trigger: CAGAATCATGGCCCCTCTCCATGAATTGGAACTTGG...ATATTGTGAAACAAACCTATCTGGGGAGAAGCAATCTACTTGCCGCTGCTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR CCA 90 bp ACCCAGACCCATTCCCTTCTCAGATCACACTCTATCCAGACTGCTGTACAGTGCCTTATCCAAAATGCTTaGAACCACAAGTGTTTCAGA +
Preference number: 2 (lower is better)
Translates to: TQTHSLLRSHSIQTAVQCLIQNA*NHKCFR
Trigger: TCTGAAACACTTGTGGTTCCAAGCATTTTGGATAAG...GCACTGTACAGCAGTCTGGATAGAGTGTGATCTGAGAAGGGAATGGGTCTGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR TCA 90 bp AGCAAGATGGCCCTTTTAGTCACATTCATCTCCAACATAGCAGGGAGCAAGACACCCCAGAAAAGAGACTaGAAGTTGAATTTGCCTTAT +
Preference number: 2 (lower is better)
Translates to: SKMALLVTFISNIAGSKTPQKRD*KLNLPY
Trigger: ATAAGGCAAATTCAACTTTCAGTCTCTTTTCTGGGG...TGTCTTGCTCCCTGCTATGTTGGAGATGAATGTGACTAAAAGGGCCATCTTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR TCA 90 bp AGGAAGCAGCGGCAAGTAGATTGCTTCTCCCCAGATAGGTTTGTTTCACAATATCAATATGCTTCCTGCTaGGTCCATTTTAAATCACAC +
Preference number: 2 (lower is better)
Translates to: RKQRQVDCFSPDRFVSQYQYASC*VHFKSH
Trigger: GTGTGATTTAAAATGGACTCAGCAGGAAGCATATTG...ATATTGTGAAACAAACCTATCTGGGGAGAAGCAATCTACTTGCCGCTGCTTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR GCA 72 bp CACGGCCAGGACTGGATGGTGCCCGTGGCAGGGCGGTaGACAAGGGCTCAGAGGTGCTGTACAGGAGGAGCC +
Preference number: 3 (lower is better)
Translates to: HGQDWMVPVAGR*TRAQRCCTGGA
Trigger: GGCTCCTCCTGTACAGCACCTCTGAGCCCTTGTGCACCGCCCTGCCACGGGCACCATCCAGTCCTGGCCGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR CCA 72 bp GGTAGGGCCTGTGCCTGCTGCCCAGTCAGCTGTGGGTaGTCACACGGCCAGGACTGGATGGTGCCCGTGGCA +
Preference number: 3 (lower is better)
Translates to: GRACACCPVSCG*SHGQDWMVPVA
Trigger: TGCCACGGGCACCATCCAGTCCTGGCCGTGTGACCACCCACAGCTGACTGGGCAGCAGGCACAGGCCCTACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR TCA 72 bp AGTTCCCTCGCAGTGCTCACCTGCTCCAGGGACGTCTaGCCTCGGGTCTCGCCCTCCCTCCCAGGTGGGTGT +
Preference number: 3 (lower is better)
Translates to: SSLAVLTCSRDV*PRVSPSLPGGC
Trigger: ACACCCACCTGGGAGGGAGGGCGAGACCCGAGGTCAGACGTCCCTGGAGCAGGTGAGCACTGCGAGGGAACT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481262.6
3UTR GCA 72 bp TCAGCTGTGGGTGGTCACACGGCCAGGACTGGATGGTaGCCGTGGCAGGGCGGTGCACAAGGGCTCAGAGGT +
Preference number: 3 (lower is better)
Translates to: SAVGGHTARTGW*PWQGGAQGLRG
Trigger: ACCTCTGAGCCCTTGTGCACCGCCCTGCCACGGGCACCATCCAGTCCTGGCCGTGTGACCACCCACAGCTGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR CCA 72 bp GTGGGTGGTCACACGGCCAGGACTGGATGGTGCCCGTaGCAGGGCGGTGCACAAGGGCTCAGAGGTGCTGTA +
Preference number: 3 (lower is better)
Translates to: VGGHTARTGWCP*QGGAQGLRGAV
Trigger: TACAGCACCTCTGAGCCCTTGTGCACCGCCCTGCCACGGGCACCATCCAGTCCTGGCCGTGTGACCACCCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR CCA 72 bp CAGTCAGCTGTGGGTGGTCACACGGCCAGGACTGGATaGTGCCCGTGGCAGGGCGGTGCACAAGGGCTCAGA +
Preference number: 3 (lower is better)
Translates to: QSAVGGHTARTG*CPWQGGAQGLR
Trigger: TCTGAGCCCTTGTGCACCGCCCTGCCACGGGCACCATCCAGTCCTGGCCGTGTGACCACCCACAGCTGACTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR CAA 90 bp CACACGGCCAGGACTGGATGGTGCCCGTGGCAGGGCGGTGCACAAGGGCTCAGATGTCATATTGGCTCATaGCAACCTCCACCTCCCGGG +
Preference number: 3 (lower is better)
Translates to: HTARTGWCPWQGGAQGLRCHIGS*QPPPPG
Trigger: CCCGGGAGGTGGAGGTTGCAATGAGCCAATATGACA...TCTGAGCCCTTGTGCACCGCCCTGCCACGGGCACCATCCAGTCCTGGCCGTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR CAA 90 bp CACACGGCCAGGACTGGATGGTGCCCGTGGCAGGGCGGTGCACAAGGGCTCAGACGAGGTTTTACCATCTaGGCCAGGCTGGTCTTGAAC +
Preference number: 3 (lower is better)
Translates to: HTARTGWCPWQGGAQGLRRGFTI*ARLVLN
Trigger: GTTCAAGACCAGCCTGGCCAAGATGGTAAAACCTCG...TCTGAGCCCTTGTGCACCGCCCTGCCACGGGCACCATCCAGTCCTGGCCGTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR GCA 72 bp GTGCCCGTGGCAGGGCGGTGCACAAGGGCTCAGAGGTaGTGTACAGGAGGAGCCAGTCTTCCAACAGTACAC +
Preference number: 3 (lower is better)
Translates to: VPVAGRCTRAQR*CTGGASLPTVH
Trigger: GTGTACTGTTGGAAGACTGGCTCCTCCTGTACAGCACCTCTGAGCCCTTGTGCACCGCCCTGCCACGGGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR TCA 72 bp ACACTAGCCGTGGCACAGGCCCGGCTGCGAGGCCCATaGTGCTTGGGAGCTGTTGTGGAGAACTCAACCTCA +
Preference number: 3 (lower is better)
Translates to: TLAVAQARLRGP*CLGAVVENSTS
Trigger: TGAGGTTGAGTTCTCCACAACAGCTCCCAAGCATCATGGGCCTCGCAGCCGGGCCTGTGCCACGGCTAGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR CCA 72 bp AAAGGAAGCTTCTGGTCTGAGATCCAAGAGGCGAGTTaGGGGAGCAGCACGCGGGGTGTGAGTTCAGGCAGG +
Preference number: 3 (lower is better)
Translates to: KGSFWSEIQEAS*GSSTRGVSSGR
Trigger: CCTGCCTGAACTCACACCCCGCGTGCTGCTCCCCCAACTCGCCTCTTGGATCTCAGACCAGAAGCTTCCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481262.6
3UTR-3UTR CAA 90 bp CAAGACAAGGAAGTGAAAGGGACTGCCTATGAGCCCAGGATCTTGCCCTCAGGAGGGACGGAACTGGGGTaGGTGAGGAGCCAACCCCAC +
Preference number: 3 (lower is better)
Translates to: QDKEVKGTAYEPRILPSGGTELG*VRSQPH
Trigger: GTGGGGTTGGCTCCTCACCAACCCCAGTTCCGTCCC...TCCTGAGGGCAAGATCCTGGGCTCATAGGCAGTCCCTTTCACTTCCTTGTCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR CAA 90 bp CACACGGCCAGGACTGGATGGTGCCCGTGGCAGGGCGGTGCACAAGGGCTCAGACCTTATCCAAAATGCTaGGAACCACAAGTGTTTCAG +
Preference number: 3 (lower is better)
Translates to: HTARTGWCPWQGGAQGLRPYPKC*EPQVFQ
Trigger: CTGAAACACTTGTGGTTCCAAGCATTTTGGATAAGG...TCTGAGCCCTTGTGCACCGCCCTGCCACGGGCACCATCCAGTCCTGGCCGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR CCA 72 bp AGGGTATCTGGAGAAATGTACACAGGCAGCCTCAGCTaGAGTCATGCGAGCCAACTCCGGCCTGCTCGGGTA +
Preference number: 3 (lower is better)
Translates to: RVSGEMYTGSLS*SHASQLRPARV
Trigger: TACCCGAGCAGGCCGGAGTTGGCTCGCATGACTCCAGCTGAGGCTGCCTGTGTACATTTCTCCAGATACCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR TCA 72 bp CCTTGGCGACATTGTAGACATACTGCCGACACGCCATaGGGCGGGTGTACATGTCAGCCATCTTCCCCTGCA +
Preference number: 3 (lower is better)
Translates to: PWRHCRHTADTP*GGCTCQPSSPA
Trigger: TGCAGGGGAAGATGGCTGACATGTACACCCGCCTCATGGCGTGTCGGCAGTATGTCTACAATGTCGCCAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481262.6
3UTR GCA 72 bp TGGCTGCAGGCCAGGACCAAGAGCCAGGATAGGTGCTaGTGGGCTGAGAACCAAGAAAACCAGTTCCCTCTT +
Preference number: 3 (lower is better)
Translates to: WLQARTKSQDRC*WAENQENQFPL
Trigger: AAGAGGGAACTGGTTTTCTTGGTTCTCAGCCCAGCAGCACCTATCCTGGCTCTTGGTCCTGGCCTGCAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR GCA 72 bp ACTTGGCTGCAGGCCAGGACCAAGAGCCAGGATAGGTaGTGCTGGGCTGAGAACCAAGAAAACCAGTTCCCT +
Preference number: 3 (lower is better)
Translates to: TWLQARTKSQDR*CWAENQENQFP
Trigger: AGGGAACTGGTTTTCTTGGTTCTCAGCCCAGCAGCACCTATCCTGGCTCTTGGTCCTGGCCTGCAGCCAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR CCA 72 bp GCGCCGAGTACCAGTTTCAGCAAAGGTGCAGAGCTGTaGTATAGGGGTGAGGCAGCAGATGAGGCTGGAGAA +
Preference number: 3 (lower is better)
Translates to: APSTSFSKGAEL*YRGEAADEAGE
Trigger: TTCTCCAGCCTCATCTGCTGCCTCACCCCTATACCACAGCTCTGCACCTTTGCTGAAACTGGTACTCGGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481262.6
ENST00000491554.6
3UTR TCA 72 bp AGTGATAACTTTATGACAGCAACACGTAATGGCTGCTaGGGACGAGGGAAGGCTGCCAGGGTCTGCCCCTGG +
Preference number: 3 (lower is better)
Translates to: SDNFMTATRNGC*GRGKAARVCPW
Trigger: CCAGGGGCAGACCCTGGCAGCCTTCCCTCGTCCTCAGCAGCCATTACGTGTTGCTGTCATAAAGTTATCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491554.6
3UTR-3UTR CAA 90 bp GGTATCTGGAGAAATGTACACAGGCAGCCTCAGCTGGAGTCATGCGAGCCAACTCGAGGTTTCCACATGTaGGCCAGGCTGGTCTTGAAC +
Preference number: 3 (lower is better)
Translates to: GIWRNVHRQPQLESCEPTRGFHM*ARLVLN
Trigger: GTTCAAGACCAGCCTGGCCAACATGTGGAAACCTCG...AGTTGGCTCGCATGACTCCAGCTGAGGCTGCCTGTGTACATTTCTCCAGATACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR CAA 90 bp CAAGACAAGGAAGTGAAAGGGACTGCCTATGAGCCCAGGATCTTGCCCTCAGGACGAGGTTTCCACATGTaGGCCAGGCTGGTCTTGAAC +
Preference number: 3 (lower is better)
Translates to: QDKEVKGTAYEPRILPSGRGFHM*ARLVLN
Trigger: GTTCAAGACCAGCCTGGCCAACATGTGGAAACCTCG...TCCTGAGGGCAAGATCCTGGGCTCATAGGCAGTCCCTTTCACTTCCTTGTCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR CAA 90 bp ACCCAGACCCATTCCCTTCTCAGATCACACTCTATCCAGACTGCTGTACAGTGCCAGGCACACACCACCTaGCCTGGCCAAGCAAGCATA +
Preference number: 3 (lower is better)
Translates to: TQTHSLLRSHSIQTAVQCQAHTT*PGQASI
Trigger: TATGCTTGCTTGGCCAGGCAAGGTGGTGTGTGCCTG...GCACTGTACAGCAGTCTGGATAGAGTGTGATCTGAGAAGGGAATGGGTCTGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR CAA 90 bp GCCATAGGGTATCTGGAGAAATGTACACAGGCAGCCTCAGCTGGAGTCATGCGATGTCATATTGGCTCATaGCAACCTCCACCTCCCGGG +
Preference number: 3 (lower is better)
Translates to: AIGYLEKCTQAASAGVMRCHIGS*QPPPPG
Trigger: CCCGGGAGGTGGAGGTTGCAATGAGCCAATATGACA...TCGCATGACTCCAGCTGAGGCTGCCTGTGTACATTTCTCCAGATACCCTATGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR CAA 90 bp GGTATCTGGAGAAATGTACACAGGCAGCCTCAGCTGGAGTCATGCGAGCCAACTTGTCATATTGGCTCATaGCAACCTCCACCTCCCGGG +
Preference number: 3 (lower is better)
Translates to: GIWRNVHRQPQLESCEPTCHIGS*QPPPPG
Trigger: CCCGGGAGGTGGAGGTTGCAATGAGCCAATATGACA...AGTTGGCTCGCATGACTCCAGCTGAGGCTGCCTGTGTACATTTCTCCAGATACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR CAA 90 bp CAGGGCTTAGACAGACTGGATGAAGCGCCCCATTTTGCCACATTGTCTCCAGGCACCAGTTCCCTCTTTTaGGAACTCGGAAGGGGTGGA +
Preference number: 3 (lower is better)
Translates to: QGLDRLDEAPHFATLSPGTSSLF*ELGRGG
Trigger: TCCACCCCTTCCGAGTTCCAAAAAGAGGGAACTGGT...GCCTGGAGACAATGTGGCAAAATGGGGCGCTTCATCCAGTCTGTCTAAGCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR CCA 72 bp CTGCAGGCCAGGACCAAGAGCCAGGATAGGTGCTGCTaGGCTGAGAACCAAGAAAACCAGTTCCCTCTTTTT +
Preference number: 3 (lower is better)
Translates to: LQARTKSQDRCC*AENQENQFPLF
Trigger: AAAAAGAGGGAACTGGTTTTCTTGGTTCTCAGCCCAGCAGCACCTATCCTGGCTCTTGGTCCTGGCCTGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR CCA 72 bp GCCCAAAACACTGAATGCCGTCCAGGGCTACCTGTGTaGCACACTCAGCTGAGTAAAGAATCACACCTGCAC +
Preference number: 3 (lower is better)
Translates to: AQNTECRPGLPV*HTQLSKESHLH
Trigger: GTGCAGGTGTGATTCTTTACTCAGCTGAGTGTGCCACACAGGTAGCCCTGGACGGCATTCAGTGTTTTGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481262.6
3UTR-3UTR CAA 90 bp TGCTGTACAGGAGGAGCCAGTCTTCCAACAGTACACAAAAGCACGCTGTCCTCTCGAGGTTTCCACATGTaGGCCAGGCTGGTCTTGAAC +
Preference number: 3 (lower is better)
Translates to: CCTGGASLPTVHKSTLSSRGFHM*ARLVLN
Trigger: GTTCAAGACCAGCCTGGCCAACATGTGGAAACCTCG...AGAGGACAGCGTGCTTTTGTGTACTGTTGGAAGACTGGCTCCTCCTGTACAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR CAA 90 bp GCCATAGGGTATCTGGAGAAATGTACACAGGCAGCCTCAGCTGGAGTCATGCGACGAGGTTTTACCATCTaGGCCAGGCTGGTCTTGAAC +
Preference number: 3 (lower is better)
Translates to: AIGYLEKCTQAASAGVMRRGFTI*ARLVLN
Trigger: GTTCAAGACCAGCCTGGCCAAGATGGTAAAACCTCG...TCGCATGACTCCAGCTGAGGCTGCCTGTGTACATTTCTCCAGATACCCTATGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR GCA 72 bp GGCACAGGGATGAGAAACATGGCAGTGAGGACTCCTTaGAACAAGAACACGAACATTCAGCAGGGAAGGAGG +
Preference number: 3 (lower is better)
Translates to: GTGMRNMAVRTP*NKNTNIQQGRR
Trigger: CCTCCTTCCCTGCTGAATGTTCGTGTTCTTGTTGCAAGGAGTCCTCACTGCCATGTTTCTCATCCCTGTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466756.2
3UTR GCA 72 bp AGTTCCAATTCATGGAGAGGGGCCATGATTCTGCTGTaGTTGAGCAGAGAGATCTCCTTGCCAGAGCCTCAC +
Preference number: 3 (lower is better)
Translates to: SSNSWRGAMILL*LSREISLPEPH
Trigger: GTGAGGCTCTGGCAAGGAGATCTCTCTGCTCAAGCACAGCAGAATCATGGCCCCTCTCCATGAATTGGAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR GCA 72 bp GAGAAGTGGGTAGGGCCACCTAAGCTTTGTAAACCCTaGCAAGGAGCTCTGTCCCAAAGACGTTGGAGAACA +
Preference number: 3 (lower is better)
Translates to: EKWVGPPKLCKP*QGALSQRRWRT
Trigger: TGTTCTCCAACGTCTTTGGGACAGAGCTCCTTGGCAGGGTTTACAAAGCTTAGGTGGCCCTACCCACTTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481262.6
ENST00000491554.6
3UTR-3UTR CAA 90 bp CTGTGCTTGAGCAGAGAGATCTCCTTGCCAGAGCCTCACCCAAGAGAAAGAGGTGATGCTTGGGAGCTGTaGTGGAGAACTCAACCTCAT +
Preference number: 3 (lower is better)
Translates to: LCLSREISLPEPHPRERGDAWEL*WRTQPH
Trigger: ATGAGGTTGAGTTCTCCACAACAGCTCCCAAGCATC...ACCTCTTTCTCTTGGGTGAGGCTCTGGCAAGGAGATCTCTCTGCTCAAGCACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR CAA 90 bp TGCTGTACAGGAGGAGCCAGTCTTCCAACAGTACACAAAAGCACGCTGTCCTCTGATGCTTGGGAGCTGTaGTGGAGAACTCAACCTCAT +
Preference number: 3 (lower is better)
Translates to: CCTGGASLPTVHKSTLSSDAWEL*WRTQPH
Trigger: ATGAGGTTGAGTTCTCCACAACAGCTCCCAAGCATC...AGAGGACAGCGTGCTTTTGTGTACTGTTGGAAGACTGGCTCCTCCTGTACAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR CAA 90 bp GCCATAGGGTATCTGGAGAAATGTACACAGGCAGCCTCAGCTGGAGTCATGCGAATGATTCTGCTGTGCTaGAGCAGAGAGATCTCCTTG +
Preference number: 3 (lower is better)
Translates to: AIGYLEKCTQAASAGVMRMILLC*SREISL
Trigger: CAAGGAGATCTCTCTGCTCAAGCACAGCAGAATCAT...TCGCATGACTCCAGCTGAGGCTGCCTGTGTACATTTCTCCAGATACCCTATGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR CAA 90 bp GGTATCTGGAGAAATGTACACAGGCAGCCTCAGCTGGAGTCATGCGAGCCAACTATGATTCTGCTGTGCTaGAGCAGAGAGATCTCCTTG +
Preference number: 3 (lower is better)
Translates to: GIWRNVHRQPQLESCEPTMILLC*SREISL
Trigger: CAAGGAGATCTCTCTGCTCAAGCACAGCAGAATCAT...AGTTGGCTCGCATGACTCCAGCTGAGGCTGCCTGTGTACATTTCTCCAGATACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR CAA 90 bp AGCAAGATGGCCCTTTTAGTCACATTCATCTCCAACATAGCAGGGAGCAAGACACAGGCACACACCACCTaGCCTGGCCAAGCAAGCATA +
Preference number: 3 (lower is better)
Translates to: SKMALLVTFISNIAGSKTQAHTT*PGQASI
Trigger: TATGCTTGCTTGGCCAGGCAAGGTGGTGTGTGCCTG...TGTCTTGCTCCCTGCTATGTTGGAGATGAATGTGACTAAAAGGGCCATCTTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR TCA 72 bp TTCATCTCCAACATAGCAGGGAGCAAGACAAGGAAGTaGAAGGGACTGCCTATGAGCCCAGGATCTTGCCCT +
Preference number: 3 (lower is better)
Translates to: FISNIAGSKTRK*KGLPMSPGSCP
Trigger: AGGGCAAGATCCTGGGCTCATAGGCAGTCCCTTTCACTTCCTTGTCTTGCTCCCTGCTATGTTGGAGATGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR GCA 72 bp CTTCTCAGATCACACTCTATCCAGACTGCTGTACAGTaGGGCCCAAAGCTGGAATTCTCAGAACACCCCCAT +
Preference number: 3 (lower is better)
Translates to: LLRSHSIQTAVQ*GPKLEFSEHPH
Trigger: ATGGGGGTGTTCTGAGAATTCCAGCTTTGGGCCGCACTGTACAGCAGTCTGGATAGAGTGTGATCTGAGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR GCA 72 bp GACCCATTCCCTTCTCAGATCACACTCTATCCAGACTaGTGTACAGTGCGGCCCAAAGCTGGAATTCTCAGA +
Preference number: 3 (lower is better)
Translates to: DPFPSQITLYPD*CTVRPKAGILR
Trigger: TCTGAGAATTCCAGCTTTGGGCCGCACTGTACAGCAGTCTGGATAGAGTGTGATCTGAGAAGGGAATGGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR CCA 72 bp ACTCTATCCAGACTGCTGTACAGTGCGGCCCAAAGCTaGAATTCTCAGAACACCCCCATTTTTGCCATGAGC +
Preference number: 3 (lower is better)
Translates to: TLSRLLYSAAQS*NSQNTPIFAMS
Trigger: GCTCATGGCAAAAATGGGGGTGTTCTGAGAATTCCAGCTTTGGGCCGCACTGTACAGCAGTCTGGATAGAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR CAA 90 bp AGCAAGATGGCCCTTTTAGTCACATTCATCTCCAACATAGCAGGGAGCAAGACATGTCATATTGGCTCATaGCAACCTCCACCTCCCGGG +
Preference number: 3 (lower is better)
Translates to: SKMALLVTFISNIAGSKTCHIGS*QPPPPG
Trigger: CCCGGGAGGTGGAGGTTGCAATGAGCCAATATGACA...TGTCTTGCTCCCTGCTATGTTGGAGATGAATGTGACTAAAAGGGCCATCTTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR CCA 72 bp TTTAGAGATGAGGAAGCAAGAGAAAGTTTGAAGGGCTaGAAGGACTTCCAGAGCTGCCCCAGACCAAAGGCA +
Preference number: 3 (lower is better)
Translates to: FRDEEARESLKG*KDFQSCPRPKA
Trigger: TGCCTTTGGTCTGGGGCAGCTCTGGAAGTCCTTCCAGCCCTTCAAACTTTCTCTTGCTTCCTCATCTCTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466756.2
3UTR-3UTR CAA 90 bp CAAGACAAGGAAGTGAAAGGGACTGCCTATGAGCCCAGGATCTTGCCCTCAGGACCTTATCCAAAATGCTaGGAACCACAAGTGTTTCAG +
Preference number: 3 (lower is better)
Translates to: QDKEVKGTAYEPRILPSGPYPKC*EPQVFQ
Trigger: CTGAAACACTTGTGGTTCCAAGCATTTTGGATAAGG...TCCTGAGGGCAAGATCCTGGGCTCATAGGCAGTCCCTTTCACTTCCTTGTCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR CAA 90 bp AGGAAGCAGCGGCAAGTAGATTGCTTCTCCCCAGATAGGTTTGTTTCACAATATCGAGGTTTCCACATGTaGGCCAGGCTGGTCTTGAAC +
Preference number: 3 (lower is better)
Translates to: RKQRQVDCFSPDRFVSQYRGFHM*ARLVLN
Trigger: GTTCAAGACCAGCCTGGCCAACATGTGGAAACCTCG...ATATTGTGAAACAAACCTATCTGGGGAGAAGCAATCTACTTGCCGCTGCTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR TCA 72 bp CCTGTCCCAACAATCCCCAGACAATATGCTTCCTGCTaGGTCCATTTTAAATCACACAACACTAGCCGTGGC +
Preference number: 3 (lower is better)
Translates to: PVPTIPRQYASC*VHFKSHNTSRG
Trigger: GCCACGGCTAGTGTTGTGTGATTTAAAATGGACTCAGCAGGAAGCATATTGTCTGGGGATTGTTGGGACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR CAA 90 bp TGCTGTACAGGAGGAGCCAGTCTTCCAACAGTACACAAAAGCACGCTGTCCTCTCCTTATCCAAAATGCTaGGAACCACAAGTGTTTCAG +
Preference number: 3 (lower is better)
Translates to: CCTGGASLPTVHKSTLSSPYPKC*EPQVFQ
Trigger: CTGAAACACTTGTGGTTCCAAGCATTTTGGATAAGG...AGAGGACAGCGTGCTTTTGTGTACTGTTGGAAGACTGGCTCCTCCTGTACAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR CAA 90 bp CAACAATCCCCAGACAATATGCTTCCTGCTGAGTCCATTTTAAATCACACAACAGATGCTTGGGAGCTGTaGTGGAGAACTCAACCTCAT +
Preference number: 3 (lower is better)
Translates to: QQSPDNMLPAESILNHTTDAWEL*WRTQPH
Trigger: ATGAGGTTGAGTTCTCCACAACAGCTCCCAAGCATC...TGTTGTGTGATTTAAAATGGACTCAGCAGGAAGCATATTGTCTGGGGATTGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR-3UTR CAA 90 bp AGCAAGATGGCCCTTTTAGTCACATTCATCTCCAACATAGCAGGGAGCAAGACACCTTATCCAAAATGCTaGGAACCACAAGTGTTTCAG +
Preference number: 3 (lower is better)
Translates to: SKMALLVTFISNIAGSKTPYPKC*EPQVFQ
Trigger: CTGAAACACTTGTGGTTCCAAGCATTTTGGATAAGG...TGTCTTGCTCCCTGCTATGTTGGAGATGAATGTGACTAAAAGGGCCATCTTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR GCA 72 bp AAGCTGGATCCAGACAGGAAGCAGCGGCAAGTAGATTaGTTCTCCCCAGATAGGTTTGTTTCACAATATATT +
Preference number: 3 (lower is better)
Translates to: KLDPDRKQRQVD*FSPDRFVSQYI
Trigger: AATATATTGTGAAACAAACCTATCTGGGGAGAAGCAATCTACTTGCCGCTGCTTCCTGTCTGGATCCAGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR GCA 90 bp CACACGGCCAGGACTGGATGGTGCCCGTGGCAGGGCGGTGCACAAGGGCTCAGACCCGTGGCAGGGCGGTaGACAAGGGCTCAGAGGTGC +
Preference number: 4 (lower is better)
Translates to: HTARTGWCPWQGGAQGLRPVAGR*TRAQRC
Trigger: GCACCTCTGAGCCCTTGTGCACCGCCCTGCCACGGG...TCTGAGCCCTTGTGCACCGCCCTGCCACGGGCACCATCCAGTCCTGGCCGTGTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR TCA 90 bp CACACGGCCAGGACTGGATGGTGCCCGTGGCAGGGCGGTGCACAAGGGCTCAGACCGGAGCCGCCATACTaGACAGGGGCTGTGATGCCC +
Preference number: 4 (lower is better)
Translates to: HTARTGWCPWQGGAQGLRPEPPY*TGAVMP
Trigger: GGGCATCACAGCCCCTGTTCAGTATGGCGGCTCCGG...TCTGAGCCCTTGTGCACCGCCCTGCCACGGGCACCATCCAGTCCTGGCCGTGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR TCA 90 bp GGCGAGTTGGGGGAGCAGCACGCGGGGTGTGAGTTCAGGCAGGAGGATCTTGCATGCTCCAGGGACGTCTaGCCTCGGGTCTCGCCCTCC +
Preference number: 4 (lower is better)
Translates to: GELGEQHAGCEFRQEDLACSRDV*PRVSPS
Trigger: GGAGGGCGAGACCCGAGGTCAGACGTCCCTGGAGCA...TGCAAGATCCTCCTGCCTGAACTCACACCCCGCGTGCTGCTCCCCCAACTCGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481262.6
CDS-3UTR TCA 90 bp GTGCGGGGACGTTCCAAGAAGGGGCTAAGCCGAGAGCGGAGCCTGAAGGAGCAGTGCTCCAGGGACGTCTaGCCTCGGGTCTCGCCCTCC +
Preference number: 4 (lower is better)
Translates to: VRGRSKKGLSRERSLKEQCSRDV*PRVSPS
Trigger: GGAGGGCGAGACCCGAGGTCAGACGTCCCTGGAGCA...CTGCTCCTTCAGGCTCCGCTCTCGGCTTAGCCCCTTCTTGGAACGTCCCCGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491554.6
CDS-3UTR CCA 90 bp CACACGGCCAGGACTGGATGGTGCCCGTGGCAGGGCGGTGCACAAGGGCTCAGAGCCGCCTCACCTCGCTaGTCCCAGCCCCTATCTCAT +
Preference number: 4 (lower is better)
Translates to: HTARTGWCPWQGGAQGLRAASPR*SQPLSH
Trigger: ATGAGATAGGGGCTGGGACCAGCGAGGTGAGGCGGC...TCTGAGCCCTTGTGCACCGCCCTGCCACGGGCACCATCCAGTCCTGGCCGTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp CACACGGCCAGGACTGGATGGTGCCCGTGGCAGGGCGGTGCACAAGGGCTCAGAGCTGACAAGAGCAGCTaGGCAGGAGGGCCTGCTGTG +
Preference number: 4 (lower is better)
Translates to: HTARTGWCPWQGGAQGLRADKSS*AGGPAV
Trigger: CACAGCAGGCCCTCCTGCCCAGCTGCTCTTGTCAGC...TCTGAGCCCTTGTGCACCGCCCTGCCACGGGCACCATCCAGTCCTGGCCGTGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR TCA 90 bp CACACGGCCAGGACTGGATGGTGCCCGTGGCAGGGCGGTGCACAAGGGCTCAGAACTGCCGACACGCCATaGGGCGGGTGTACATGTCAG +
Preference number: 4 (lower is better)
Translates to: HTARTGWCPWQGGAQGLRTADTP*GGCTCQ
Trigger: CTGACATGTACACCCGCCTCATGGCGTGTCGGCAGT...TCTGAGCCCTTGTGCACCGCCCTGCCACGGGCACCATCCAGTCCTGGCCGTGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR TCA 90 bp AAGGGGCTAAGCCGAGAGCGGAGCCTGAAGGAGCAGGCACTCTTCGGGCAGGCTGCCGAGAGCGGAGCCTaGAGGAGCAGGCACTCTTCG +
Preference number: 4 (lower is better)
Translates to: KGLSRERSLKEQALFGQAAESGA*RSRHSS
Trigger: CGAAGAGTGCCTGCTCCTTCAGGCTCCGCTCTCGGC...AGCCTGCCCGAAGAGTGCCTGCTCCTTCAGGCTCCGCTCTCGGCTTAGCCCCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491554.6
CDS-3UTR GCA 90 bp CACACGGCCAGGACTGGATGGTGCCCGTGGCAGGGCGGTGCACAAGGGCTCAGACGCAGTCGCCATCTCTaGCATGCACGAAGAGCCAGC +
Preference number: 4 (lower is better)
Translates to: HTARTGWCPWQGGAQGLRRSRHL*HARRAS
Trigger: GCTGGCTCTTCGTGCATGGCAGAGATGGCGACTGCG...TCTGAGCCCTTGTGCACCGCCCTGCCACGGGCACCATCCAGTCCTGGCCGTGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR GCA 90 bp CACACGGCCAGGACTGGATGGTGCCCGTGGCAGGGCGGTGCACAAGGGCTCAGACGCGATCTCAGCTCCTaGAACCTCTGCCTCCTGCGT +
Preference number: 4 (lower is better)
Translates to: HTARTGWCPWQGGAQGLRRDLSS*NLCLLR
Trigger: ACGCAGGAGGCAGAGGTTGCAGGAGCTGAGATCGCG...TCTGAGCCCTTGTGCACCGCCCTGCCACGGGCACCATCCAGTCCTGGCCGTGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp CACACGGCCAGGACTGGATGGTGCCCGTGGCAGGGCGGTGCACAAGGGCTCAGACTGCTGTGGGCAGGGTaGGAAAGCCGCCACATCTCT +
Preference number: 4 (lower is better)
Translates to: HTARTGWCPWQGGAQGLRLLWAG*ESRHIS
Trigger: AGAGATGTGGCGGCTTTCCCACCCTGCCCACAGCAG...TCTGAGCCCTTGTGCACCGCCCTGCCACGGGCACCATCCAGTCCTGGCCGTGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR TCA 90 bp CACACGGCCAGGACTGGATGGTGCCCGTGGCAGGGCGGTGCACAAGGGCTCAGAACTGAACAGGGGCTGTaGTGCCCAATACGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: HTARTGWCPWQGGAQGLRTEQGL*CPIRPG
Trigger: ACCTGGGCGTATTGGGCATCACAGCCCCTGTTCAGT...TCTGAGCCCTTGTGCACCGCCCTGCCACGGGCACCATCCAGTCCTGGCCGTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR TCA 90 bp AAGCCGAGAGCGGAGCCTGAAGGAGCAGGCACTCTTCGGGCAGGCTGCCATAGGGCAGCACGCGGGGTGTaGGTTCAGGCAGGAGGATCT +
Preference number: 4 (lower is better)
Translates to: KPRAEPEGAGTLRAGCHRAARGV*VQAGGS
Trigger: AGATCCTCCTGCCTGAACTCACACCCCGCGTGCTGC...CCTATGGCAGCCTGCCCGAAGAGTGCCTGCTCCTTCAGGCTCCGCTCTCGGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491554.6
CDS-3UTR CCA 90 bp CACACGGCCAGGACTGGATGGTGCCCGTGGCAGGGCGGTGCACAAGGGCTCAGACGTGCAGGTAGGGAATaGTGTGGTCCAGGACCGCTT +
Preference number: 4 (lower is better)
Translates to: HTARTGWCPWQGGAQGLRRAGRE*CGPGPL
Trigger: AAGCGGTCCTGGACCACACCATTCCCTACCTGCACG...TCTGAGCCCTTGTGCACCGCCCTGCCACGGGCACCATCCAGTCCTGGCCGTGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR TCA 90 bp CACACGGCCAGGACTGGATGGTGCCCGTGGCAGGGCGGTGCACAAGGGCTCAGATTGCCACCAAAACACTaGATGCCGTCCAGGGCTACC +
Preference number: 4 (lower is better)
Translates to: HTARTGWCPWQGGAQGLRLPPKH*MPSRAT
Trigger: GGTAGCCCTGGACGGCATTCAGTGTTTTGGTGGCAA...TCTGAGCCCTTGTGCACCGCCCTGCCACGGGCACCATCCAGTCCTGGCCGTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR GCA 90 bp CACACGGCCAGGACTGGATGGTGCCCGTGGCAGGGCGGTGCACAAGGGCTCAGAGTAACTGAGCCCCACTaGTCCGGAAGCTCGGGATAT +
Preference number: 4 (lower is better)
Translates to: HTARTGWCPWQGGAQGLRVTEPH*SGSSGY
Trigger: ATATCCCGAGCTTCCGGAGCAGTGGGGCTCAGTTAC...TCTGAGCCCTTGTGCACCGCCCTGCCACGGGCACCATCCAGTCCTGGCCGTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR GCA 90 bp TCCAAGAAGGGGCTAAGCCGAGAGCGGAGCCTGAAGGAGCAGGCACTCTTCGGGTGGTCCAGGACCGCTTaGATGAGCCCAAGAGGCCCC +
Preference number: 4 (lower is better)
Translates to: SKKGLSRERSLKEQALFGWSRTA*MSPRGP
Trigger: GGGGCCTCTTGGGCTCATGCAAGCGGTCCTGGACCA...CCCGAAGAGTGCCTGCTCCTTCAGGCTCCGCTCTCGGCTTAGCCCCTTCTTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491554.6
CDS-3UTR GCA 90 bp CACACGGCCAGGACTGGATGGTGCCCGTGGCAGGGCGGTGCACAAGGGCTCAGAAGAAAGGCCACTAGGTaGAGGAAAAGGGGGCGAAGG +
Preference number: 4 (lower is better)
Translates to: HTARTGWCPWQGGAQGLRRKATR*RKRGRR
Trigger: CCTTCGCCCCCTTTTCCTGCACCTAGTGGCCTTTCT...TCTGAGCCCTTGTGCACCGCCCTGCCACGGGCACCATCCAGTCCTGGCCGTGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR GCA 90 bp CACACGGCCAGGACTGGATGGTGCCCGTGGCAGGGCGGTGCACAAGGGCTCAGAATGAGCCCAGGATCTTaGCCTCAGGATGGGACGGAA +
Preference number: 4 (lower is better)
Translates to: HTARTGWCPWQGGAQGLRMSPGS*PQDGTE
Trigger: TTCCGTCCCATCCTGAGGGCAAGATCCTGGGCTCAT...TCTGAGCCCTTGTGCACCGCCCTGCCACGGGCACCATCCAGTCCTGGCCGTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp CACACGGCCAGGACTGGATGGTGCCCGTGGCAGGGCGGTGCACAAGGGCTCAGAATCTTGCCCTCAGGATaGGACGGAACTGGGGTTGGT +
Preference number: 4 (lower is better)
Translates to: HTARTGWCPWQGGAQGLRILPSG*DGTGVG
Trigger: ACCAACCCCAGTTCCGTCCCATCCTGAGGGCAAGAT...TCTGAGCCCTTGTGCACCGCCCTGCCACGGGCACCATCCAGTCCTGGCCGTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR TCA 90 bp GGGACGTTCCAAGAAGGGGCTAAGCCGAGAGCGGAGCCTGAAGGAGCAGGCACTACTGCCGACACGCCATaGGGCGGGTGTACATGTCAG +
Preference number: 4 (lower is better)
Translates to: GTFQEGAKPRAEPEGAGTTADTP*GGCTCQ
Trigger: CTGACATGTACACCCGCCTCATGGCGTGTCGGCAGT...AGTGCCTGCTCCTTCAGGCTCCGCTCTCGGCTTAGCCCCTTCTTGGAACGTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491554.6
CDS-3UTR TCA 90 bp GGCGAGTTGGGGGAGCAGCACGCGGGGTGTGAGTTCAGGCAGGAGGATCTTGCAGTCTGCCCAAAACACTaGATGCCGTCCAGGGCTACC +
Preference number: 4 (lower is better)
Translates to: GELGEQHAGCEFRQEDLAVCPKH*MPSRAT
Trigger: GGTAGCCCTGGACGGCATTCAGTGTTTTGGGCAGAC...TGCAAGATCCTCCTGCCTGAACTCACACCCCGCGTGCTGCTCCCCCAACTCGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000481262.6
CDS-3UTR GCA 90 bp CACACGGCCAGGACTGGATGGTGCCCGTGGCAGGGCGGTGCACAAGGGCTCAGAAGCCAGGATAGGTGCTaGTGGGCTGAGAACCAAGAA +
Preference number: 4 (lower is better)
Translates to: HTARTGWCPWQGGAQGLRSQDRC*WAENQE
Trigger: TTCTTGGTTCTCAGCCCAGCAGCACCTATCCTGGCT...TCTGAGCCCTTGTGCACCGCCCTGCCACGGGCACCATCCAGTCCTGGCCGTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp TGCTGTGGGCAGGGTGGGAAAGCCGCCACATCTCTACTTCCCAAGAAAGGCCACAGCGAGTGGGCCCGCTaGGAAACGAAGCCGGCAAGC +
Preference number: 4 (lower is better)
Translates to: CCGQGGKAATSLLPKKGHSEWAR*ETKPAS
Trigger: GCTTGCCGGCTTCGTTTCCCAGCGGGCCCACTCGCT...GTGGCCTTTCTTGGGAAGTAGAGATGTGGCGGCTTTCCCACCCTGCCCACAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp TGCTGTGGGCAGGGTGGGAAAGCCGCCACATCTCTACTTCCCAAGAAAGGCCACTCACACGGCCAGGACTaGATGGTGCCCGTGGCAGGG +
Preference number: 4 (lower is better)
Translates to: CCGQGGKAATSLLPKKGHSHGQD*MVPVAG
Trigger: CCCTGCCACGGGCACCATCCAGTCCTGGCCGTGTGA...GTGGCCTTTCTTGGGAAGTAGAGATGTGGCGGCTTTCCCACCCTGCCCACAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR CAA 72 bp AGGCCCGGCTGCGAGGCCCATGATGCTTGGGAGCTGTaGTGGAGAACTCAACCTCATCCAGAGGCCAGAGGG +
Preference number: 4 (lower is better)
Translates to: RPGCEAHDAWEL*WRTQPHPEARG
Trigger: CCCTCTGGCCTCTGGATGAGGTTGAGTTCTCCACAACAGCTCCCAAGCATCATGGGCCTCGCAGCCGGGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR CAA 72 bp CTGACCTCGGGTCTCGCCCTCCCTCCCAGGTGGGTGTaGGGCGGAAAAGGTCTGCCCAAAACACTGAATGCC +
Preference number: 4 (lower is better)
Translates to: LTSGLALPPRWV*GGKGLPKTLNA
Trigger: GGCATTCAGTGTTTTGGGCAGACCTTTTCCGCCCAACACCCACCTGGGAGGGAGGGCGAGACCCGAGGTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481262.6
CDS-3UTR TCA 90 bp TCCAAGAAGGGGCTAAGCCGAGAGCGGAGCCTGAAGGAGCAGGCACTCTTCGGGGCATGGCCAAAACACTaGATGCCGTCCAGGGCTACC +
Preference number: 4 (lower is better)
Translates to: SKKGLSRERSLKEQALFGAWPKH*MPSRAT
Trigger: GGTAGCCCTGGACGGCATTCAGTGTTTTGGCCATGC...CCCGAAGAGTGCCTGCTCCTTCAGGCTCCGCTCTCGGCTTAGCCCCTTCTTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000491554.6
CDS-3UTR TCA 90 bp CACACGGCCAGGACTGGATGGTGCCCGTGGCAGGGCGGTGCACAAGGGCTCAGACGATGTACTCACCACTaGTCAGCTTCGGGAGATACT +
Preference number: 4 (lower is better)
Translates to: HTARTGWCPWQGGAQGLRRCTHH*SASGDT
Trigger: AGTATCTCCCGAAGCTGATCAGTGGTGAGTACATCG...TCTGAGCCCTTGTGCACCGCCCTGCCACGGGCACCATCCAGTCCTGGCCGTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR GCA 90 bp CACACGGCCAGGACTGGATGGTGCCCGTGGCAGGGCGGTGCACAAGGGCTCAGAGCCATGATTCTGCTGTaGTTGAGCAGAGAGATCTCC +
Preference number: 4 (lower is better)
Translates to: HTARTGWCPWQGGAQGLRAMILL*LSREIS
Trigger: GGAGATCTCTCTGCTCAAGCACAGCAGAATCATGGC...TCTGAGCCCTTGTGCACCGCCCTGCCACGGGCACCATCCAGTCCTGGCCGTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR GCA 90 bp CACACGGCCAGGACTGGATGGTGCCCGTGGCAGGGCGGTGCACAAGGGCTCAGACTCAGCCTCCTGAAGTaGTGGGATTACAAGCATGAG +
Preference number: 4 (lower is better)
Translates to: HTARTGWCPWQGGAQGLRLSLLK*WDYKHE
Trigger: CTCATGCTTGTAATCCCAGCACTTCAGGAGGCTGAG...TCTGAGCCCTTGTGCACCGCCCTGCCACGGGCACCATCCAGTCCTGGCCGTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR GCA 90 bp CAGGGCTTAGACAGACTGGATGAAGCGCCCCATTTTGCCACATTGTCTCCAGGCGCCAGGACTGGATGGTaGCCGTGGCAGGGCGGTGCA +
Preference number: 4 (lower is better)
Translates to: QGLDRLDEAPHFATLSPGARTGW*PWQGGA
Trigger: TGCACCGCCCTGCCACGGGCACCATCCAGTCCTGGC...GCCTGGAGACAATGTGGCAAAATGGGGCGCTTCATCCAGTCTGTCTAAGCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR GCA 90 bp GGGTATCTGGAGAAATGTACACAGGCAGCCTCAGCTGGAGTCATGCGAGCCAACGAGCCAACTCCGGCCTaGTCGGGTAGGGCCTGTGCC +
Preference number: 4 (lower is better)
Translates to: GYLEKCTQAASAGVMRANEPTPA*SGRACA
Trigger: GGCACAGGCCCTACCCGAGCAGGCCGGAGTTGGCTC...GTTGGCTCGCATGACTCCAGCTGAGGCTGCCTGTGTACATTTCTCCAGATACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR GCA 90 bp CTGTGCTTGAGCAGAGAGATCTCCTTGCCAGAGCCTCACCCAAGAGAAAGAGGTGCCCGCCGAAGGCGTTaGTGCCCTTGGACCGCACCC +
Preference number: 4 (lower is better)
Translates to: LCLSREISLPEPHPRERGARRRR*CPWTAP
Trigger: GGGTGCGGTCCAAGGGCAGCAACGCCTTCGGCGGGC...ACCTCTTTCTCTTGGGTGAGGCTCTGGCAAGGAGATCTCTCTGCTCAAGCACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp CACACGGCCAGGACTGGATGGTGCCCGTGGCAGGGCGGTGCACAAGGGCTCAGACCATTGCGTACAAGCTaGTTGATGCAGAGGTTGGAG +
Preference number: 4 (lower is better)
Translates to: HTARTGWCPWQGGAQGLRPLRTS*LMQRLE
Trigger: CTCCAACCTCTGCATCAACCAGCTTGTACGCAATGG...TCTGAGCCCTTGTGCACCGCCCTGCCACGGGCACCATCCAGTCCTGGCCGTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp GAGCGGAGCCTGAAGGAGCAGGCACTCTTCGGGCAGGCTGCCATAGGTAGGGGAAAGTGGCCGATCTTCTaGCCAAAGGCTTCCCTCACG +
Preference number: 4 (lower is better)
Translates to: ERSLKEQALFGQAAIGRGKWPIF*PKASLT
Trigger: CGTGAGGGAAGCCTTTGGCCAGAAGATCGGCCACTT...TCCCCTACCTATGGCAGCCTGCCCGAAGAGTGCCTGCTCCTTCAGGCTCCGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491554.6
CDS-3UTR CCA 90 bp CACACGGCCAGGACTGGATGGTGCCCGTGGCAGGGCGGTGCACAAGGGCTCAGACCTCATCGCAGGCCTTaGCGACATTGTAGACATACT +
Preference number: 4 (lower is better)
Translates to: HTARTGWCPWQGGAQGLRPHRRP*RHCRHT
Trigger: AGTATGTCTACAATGTCGCCAAGGCCTGCGATGAGG...TCTGAGCCCTTGTGCACCGCCCTGCCACGGGCACCATCCAGTCCTGGCCGTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR CAA 72 bp CCAGGATCTTGCCCTCAGGATGGGACGGAACTGGGGTaGGTGAGGAGCCAACCCCACCTGTCTCAAGCCTCA +
Preference number: 4 (lower is better)
Translates to: PGSCPQDGTELG*VRSQPHLSQAS
Trigger: TGAGGCTTGAGACAGGTGGGGTTGGCTCCTCACCAACCCCAGTTCCGTCCCATCCTGAGGGCAAGATCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR TCA 90 bp GGGTATCTGGAGAAATGTACACAGGCAGCCTCAGCTGGAGTCATGCGAGCCAACCCGGAGCCGCCATACTaGACAGGGGCTGTGATGCCC +
Preference number: 4 (lower is better)
Translates to: GYLEKCTQAASAGVMRANPEPPY*TGAVMP
Trigger: GGGCATCACAGCCCCTGTTCAGTATGGCGGCTCCGG...GTTGGCTCGCATGACTCCAGCTGAGGCTGCCTGTGTACATTTCTCCAGATACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR TCA 90 bp GCAGGCCTTGGCGACATTGTAGACATACTGCCGACACGCCATGAGGCGGGTGTAACTGCCGACACGCCATaGGGCGGGTGTACATGTCAG +
Preference number: 4 (lower is better)
Translates to: AGLGDIVDILPTRHEAGVTADTP*GGCTCQ
Trigger: CTGACATGTACACCCGCCTCATGGCGTGTCGGCAGT...TACACCCGCCTCATGGCGTGTCGGCAGTATGTCTACAATGTCGCCAAGGCCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481262.6
CDS-3UTR TCA 90 bp CACACGGCCAGGACTGGATGGTGCCCGTGGCAGGGCGGTGCACAAGGGCTCAGACCATGGGAAAGTCATTaGTGTAGCCATTGCCACCAA +
Preference number: 4 (lower is better)
Translates to: HTARTGWCPWQGGAQGLRPWESH*CSHCHQ
Trigger: TTGGTGGCAATGGCTACATCAATGACTTTCCCATGG...TCTGAGCCCTTGTGCACCGCCCTGCCACGGGCACCATCCAGTCCTGGCCGTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR TCA 90 bp TGCTGTGGGCAGGGTGGGAAAGCCGCCACATCTCTACTTCCCAAGAAAGGCCACCTGGGAAAGGGAGGCTaGGACCTCTCTCCTAAGGGC +
Preference number: 4 (lower is better)
Translates to: CCGQGGKAATSLLPKKGHLGKGG*DLSPKG
Trigger: GCCCTTAGGAGAGAGGTCTCAGCCTCCCTTTCCCAG...GTGGCCTTTCTTGGGAAGTAGAGATGTGGCGGCTTTCCCACCCTGCCCACAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR TCA 90 bp TGCTGTGGGCAGGGTGGGAAAGCCGCCACATCTCTACTTCCCAAGAAAGGCCACGGGGCCAGGTGCTCCTaGAGGAACTTAGCCATGGTC +
Preference number: 4 (lower is better)
Translates to: CCGQGGKAATSLLPKKGHGARCS*RNLAMV
Trigger: GACCATGGCTAAGTTCCTTCAGGAGCACCTGGCCCC...GTGGCCTTTCTTGGGAAGTAGAGATGTGGCGGCTTTCCCACCCTGCCCACAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487418.8
ENST00000651168.1
CDS-3UTR GCA 90 bp GCAGGCCTTGGCGACATTGTAGACATACTGCCGACACGCCATGAGGCGGGTGTATCAGTTCCCTCGCAGTaGTCACCTGCTCCAGGGACG +
Preference number: 4 (lower is better)
Translates to: AGLGDIVDILPTRHEAGVSVPSQ*SPAPGT
Trigger: CGTCCCTGGAGCAGGTGAGCACTGCGAGGGAACTGA...TACACCCGCCTCATGGCGTGTCGGCAGTATGTCTACAATGTCGCCAAGGCCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481262.6
CDS-3UTR GCA 90 bp GGACGTTCCAAGAAGGGGCTAAGCCGAGAGCGGAGCCTGAAGGAGCAGGCACTCTCAGCCATCTTCCCCTaGATCAACTGGAAGTGGCCG +
Preference number: 4 (lower is better)
Translates to: GRSKKGLSRERSLKEQALSAIFP*INWKWP
Trigger: CGGCCACTTCCAGTTGATGCAGGGGAAGATGGCTGA...GAGTGCCTGCTCCTTCAGGCTCCGCTCTCGGCTTAGCCCCTTCTTGGAACGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491554.6
CDS-3UTR GCA 90 bp TGCTGTGGGCAGGGTGGGAAAGCCGCCACATCTCTACTTCCCAAGAAAGGCCACACAAGCTCGGCTCACTaGAACGTCCGCCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: CCGQGGKAATSLLPKKGHTSSAH*NVRLLG
Trigger: ACCCAGGAGGCGGACGTTGCAGTGAGCCGAGCTTGT...GTGGCCTTTCTTGGGAAGTAGAGATGTGGCGGCTTTCCCACCCTGCCCACAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR GCA 90 bp TGCTGTGGGCAGGGTGGGAAAGCCGCCACATCTCTACTTCCCAAGAAAGGCCACCGCGATCTCAGCTCCTaGAACCTCTGCCTCCTGCGT +
Preference number: 4 (lower is better)
Translates to: CCGQGGKAATSLLPKKGHRDLSS*NLCLLR
Trigger: ACGCAGGAGGCAGAGGTTGCAGGAGCTGAGATCGCG...GTGGCCTTTCTTGGGAAGTAGAGATGTGGCGGCTTTCCCACCCTGCCCACAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR GCA 90 bp CAAGACAAGGAAGTGAAAGGGACTGCCTATGAGCCCAGGATCTTGCCCTCAGGACCCGTGGCAGGGCGGTaGACAAGGGCTCAGAGGTGC +
Preference number: 4 (lower is better)
Translates to: QDKEVKGTAYEPRILPSGPVAGR*TRAQRC
Trigger: GCACCTCTGAGCCCTTGTGCACCGCCCTGCCACGGG...TCCTGAGGGCAAGATCCTGGGCTCATAGGCAGTCCCTTTCACTTCCTTGTCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR GCA 90 bp CTGTGCTTGAGCAGAGAGATCTCCTTGCCAGAGCCTCACCCAAGAGAAAGAGGTCCCGTGGCAGGGCGGTaGACAAGGGCTCAGAGGTGC +
Preference number: 4 (lower is better)
Translates to: LCLSREISLPEPHPRERGPVAGR*TRAQRC
Trigger: GCACCTCTGAGCCCTTGTGCACCGCCCTGCCACGGG...ACCTCTTTCTCTTGGGTGAGGCTCTGGCAAGGAGATCTCTCTGCTCAAGCACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR GCA 90 bp GGTATCTGGAGAAATGTACACAGGCAGCCTCAGCTGGAGTCATGCGAGCCAACTCCCGTGGCAGGGCGGTaGACAAGGGCTCAGAGGTGC +
Preference number: 4 (lower is better)
Translates to: GIWRNVHRQPQLESCEPTPVAGR*TRAQRC
Trigger: GCACCTCTGAGCCCTTGTGCACCGCCCTGCCACGGG...AGTTGGCTCGCATGACTCCAGCTGAGGCTGCCTGTGTACATTTCTCCAGATACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR GCA 90 bp CAGGGCTTAGACAGACTGGATGAAGCGCCCCATTTTGCCACATTGTCTCCAGGCAGGGCCTGTGCCTGCTaGCCAGTCAGCTGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: QGLDRLDEAPHFATLSPGRACAC*PVSCGW
Trigger: CCACCCACAGCTGACTGGGCAGCAGGCACAGGCCCT...GCCTGGAGACAATGTGGCAAAATGGGGCGCTTCATCCAGTCTGTCTAAGCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR GCA 90 bp TGGGAAAGGGAGGCTGAGACCTCTCTCCTAAGGGCTGATTTTACCTTCCTGTCCGAGCCAACTCCGGCCTaGTCGGGTAGGGCCTGTGCC +
Preference number: 4 (lower is better)
Translates to: WEREAETSLLRADFTFLSEPTPA*SGRACA
Trigger: GGCACAGGCCCTACCCGAGCAGGCCGGAGTTGGCTC...GGACAGGAAGGTAAAATCAGCCCTTAGGAGAGAGGTCTCAGCCTCCCTTTCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR GCA 90 bp CTGTGCTTGAGCAGAGAGATCTCCTTGCCAGAGCCTCACCCAAGAGAAAGAGGTGAGCCAACTCCGGCCTaGTCGGGTAGGGCCTGTGCC +
Preference number: 4 (lower is better)
Translates to: LCLSREISLPEPHPRERGEPTPA*SGRACA
Trigger: GGCACAGGCCCTACCCGAGCAGGCCGGAGTTGGCTC...ACCTCTTTCTCTTGGGTGAGGCTCTGGCAAGGAGATCTCTCTGCTCAAGCACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR GCA 90 bp GGGTATCTGGAGAAATGTACACAGGCAGCCTCAGCTGGAGTCATGCGAGCCAACCCCTGCCCCGAACGCTaGAAATGCTGGCGTGCTCCC +
Preference number: 4 (lower is better)
Translates to: GYLEKCTQAASAGVMRANPCPER*KCWRAP
Trigger: GGGAGCACGCCAGCATTTGCAGCGTTCGGGGCAGGG...GTTGGCTCGCATGACTCCAGCTGAGGCTGCCTGTGTACATTTCTCCAGATACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650656.1
ENST00000651168.1
CDS-3UTR GCA 90 bp GGTATCTGGAGAAATGTACACAGGCAGCCTCAGCTGGAGTCATGCGAGCCAACTCGCCGAAGGCGTTGCTaGCCTTGGACCGCACCCGAG +
Preference number: 4 (lower is better)
Translates to: GIWRNVHRQPQLESCEPTRRRRC*PWTAPE
Trigger: CTCGGGTGCGGTCCAAGGGCAGCAACGCCTTCGGCG...AGTTGGCTCGCATGACTCCAGCTGAGGCTGCCTGTGTACATTTCTCCAGATACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp GTGCGGGGACGTTCCAAGAAGGGGCTAAGCCGAGAGCGGAGCCTGAAGGAGCAGCATGGCCCAGGATGTTaGCAGCAGGAATCTTGCAGT +
Preference number: 4 (lower is better)
Translates to: VRGRSKKGLSRERSLKEQHGPGC*QQESCS
Trigger: ACTGCAAGATTCCTGCTGCCAACATCCTGGGCCATG...CTGCTCCTTCAGGCTCCGCTCTCGGCTTAGCCCCTTCTTGGAACGTCCCCGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491554.6
CDS-3UTR CCA 90 bp CCCAAGCGCCGAGTACCAGTTTCAGCAAAGGTGCAGAGCTGTGGTATAGGGGTGGCCCTCCCTCCCAGGTaGGTGTTGGGCGGAAAAGGT +
Preference number: 4 (lower is better)
Translates to: PKRRVPVSAKVQSCGIGVALPPR*VLGGKG
Trigger: ACCTTTTCCGCCCAACACCCACCTGGGAGGGAGGGC...CACCCCTATACCACAGCTCTGCACCTTTGCTGAAACTGGTACTCGGCGCTTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000481262.6
ENST00000491554.6
CDS-3UTR CCA 90 bp AAAGGAAGCTTCTGGTCTGAGATCCAAGAGGCGAGTTGGGGGAGCAGCACGCGGCTCCCAGGTGGGTGTTaGGCGGAAAAGGTCTGCCCA +
Preference number: 4 (lower is better)
Translates to: KGSFWSEIQEASWGSSTRLPGGC*AEKVCP
Trigger: TGGGCAGACCTTTTCCGCCCAACACCCACCTGGGAG...CCGCGTGCTGCTCCCCCAACTCGCCTCTTGGATCTCAGACCAGAAGCTTCCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481262.6
CDS-3UTR CCA 90 bp GCGCCGAGTACCAGTTTCAGCAAAGGTGCAGAGCTGTGGTATAGGGGTGAGGCAATCCAAGAGGCGAGTTaGGGGAGCAGCACGCGGGGT +
Preference number: 4 (lower is better)
Translates to: APSTSFSKGAELWYRGEAIQEAS*GSSTRG
Trigger: ACCCCGCGTGCTGCTCCCCCAACTCGCCTCTTGGAT...TGCCTCACCCCTATACCACAGCTCTGCACCTTTGCTGAAACTGGTACTCGGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000481262.6
ENST00000491554.6
CDS-3UTR CCA 90 bp GGGTATCTGGAGAAATGTACACAGGCAGCCTCAGCTGGAGTCATGCGAGCCAACACTGGATGGTGCCCGTaGCAGGGCGGTGCACAAGGG +
Preference number: 4 (lower is better)
Translates to: GYLEKCTQAASAGVMRANTGWCP*QGGAQG
Trigger: CCCTTGTGCACCGCCCTGCCACGGGCACCATCCAGT...GTTGGCTCGCATGACTCCAGCTGAGGCTGCCTGTGTACATTTCTCCAGATACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR TCA 90 bp GAGCGGAGCCTGAAGGAGCAGGCACTCTTCGGGCAGGCTGCCATAGGTAGGGGATGTGGCACACTCAGCTaGGTAAAGAATCACACCTGC +
Preference number: 4 (lower is better)
Translates to: ERSLKEQALFGQAAIGRGCGTLS*VKNHTC
Trigger: GCAGGTGTGATTCTTTACTCAGCTGAGTGTGCCACA...TCCCCTACCTATGGCAGCCTGCCCGAAGAGTGCCTGCTCCTTCAGGCTCCGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491554.6
CDS-3UTR TCA 90 bp CCAGACCCATTCCCTTCTCAGATCACACTCTATCCAGACTGCTGTACAGTGCGGCCGGAGCCGCCATACTaGACAGGGGCTGTGATGCCC +
Preference number: 4 (lower is better)
Translates to: PDPFPSQITLYPDCCTVRPEPPY*TGAVMP
Trigger: GGGCATCACAGCCCCTGTTCAGTATGGCGGCTCCGG...CCGCACTGTACAGCAGTCTGGATAGAGTGTGATCTGAGAAGGGAATGGGTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR TCA 90 bp GGGTATCTGGAGAAATGTACACAGGCAGCCTCAGCTGGAGTCATGCGAGCCAACAGTGGGCACCGTAACTaGGCCCCACTGCTCCGGAAG +
Preference number: 4 (lower is better)
Translates to: GYLEKCTQAASAGVMRANSGHRN*APLLRK
Trigger: CTTCCGGAGCAGTGGGGCTCAGTTACGGTGCCCACT...GTTGGCTCGCATGACTCCAGCTGAGGCTGCCTGTGTACATTTCTCCAGATACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR TCA 90 bp CGAGTACCAGTTTCAGCAAAGGTGCAGAGCTGTGGTATAGGGGTGAGGCAGCAGGCAGCACGCGGGGTGTaGGTTCAGGCAGGAGGATCT +
Preference number: 4 (lower is better)
Translates to: RVPVSAKVQSCGIGVRQQAARGV*VQAGGS
Trigger: AGATCCTCCTGCCTGAACTCACACCCCGCGTGCTGC...CTGCTGCCTCACCCCTATACCACAGCTCTGCACCTTTGCTGAAACTGGTACTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000481262.6
ENST00000491554.6
CDS-3UTR TCA 90 bp TGCTGTGGGCAGGGTGGGAAAGCCGCCACATCTCTACTTCCCAAGAAAGGCCACCCTTCCTGTCCCTCATaGAAGAACGGGCTGGAGGAC +
Preference number: 4 (lower is better)
Translates to: CCGQGGKAATSLLPKKGHPSCPS*KNGLED
Trigger: GTCCTCCAGCCCGTTCTTTCATGAGGGACAGGAAGG...GTGGCCTTTCTTGGGAAGTAGAGATGTGGCGGCTTTCCCACCCTGCCCACAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR TCA 90 bp CAGGGCTTAGACAGACTGGATGAAGCGCCCCATTTTGCCACATTGTCTCCAGGCCGGAACTGGGGTTGGTaGGGAGCCAACCCCACCTGT +
Preference number: 4 (lower is better)
Translates to: QGLDRLDEAPHFATLSPGRNWGW*GANPTC
Trigger: ACAGGTGGGGTTGGCTCCTCACCAACCCCAGTTCCG...GCCTGGAGACAATGTGGCAAAATGGGGCGCTTCATCCAGTCTGTCTAAGCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR GCA 90 bp GCGCCGAGTACCAGTTTCAGCAAAGGTGCAGAGCTGTGGTATAGGGGTGAGGCATCAGTTCCCTCGCAGTaGTCACCTGCTCCAGGGACG +
Preference number: 4 (lower is better)
Translates to: APSTSFSKGAELWYRGEASVPSQ*SPAPGT
Trigger: CGTCCCTGGAGCAGGTGAGCACTGCGAGGGAACTGA...TGCCTCACCCCTATACCACAGCTCTGCACCTTTGCTGAAACTGGTACTCGGCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481262.6
ENST00000491554.6
CDS-3UTR GCA 90 bp CTGTGCTTGAGCAGAGAGATCTCCTTGCCAGAGCCTCACCCAAGAGAAAGAGGTTGGCACAGGCCCGGCTaGGAGGCCCATGATGCTTGG +
Preference number: 4 (lower is better)
Translates to: LCLSREISLPEPHPRERGWHRPG*EAHDAW
Trigger: CCAAGCATCATGGGCCTCGCAGCCGGGCCTGTGCCA...ACCTCTTTCTCTTGGGTGAGGCTCTGGCAAGGAGATCTCTCTGCTCAAGCACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR GCA 90 bp CCAGACCCATTCCCTTCTCAGATCACACTCTATCCAGACTGCTGTACAGTGCGGTGGCACAGGCCCGGCTaGGAGGCCCATGATGCTTGG +
Preference number: 4 (lower is better)
Translates to: PDPFPSQITLYPDCCTVRWHRPG*EAHDAW
Trigger: CCAAGCATCATGGGCCTCGCAGCCGGGCCTGTGCCA...CCGCACTGTACAGCAGTCTGGATAGAGTGTGATCTGAGAAGGGAATGGGTCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR GCA 90 bp ACCCAGACCCATTCCCTTCTCAGATCACACTCTATCCAGACTGCTGTACAGTGCGCCAGGACTGGATGGTaGCCGTGGCAGGGCGGTGCA +
Preference number: 4 (lower is better)
Translates to: TQTHSLLRSHSIQTAVQCARTGW*PWQGGA
Trigger: TGCACCGCCCTGCCACGGGCACCATCCAGTCCTGGC...GCACTGTACAGCAGTCTGGATAGAGTGTGATCTGAGAAGGGAATGGGTCTGGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR GCA 90 bp CTGTGCTTGAGCAGAGAGATCTCCTTGCCAGAGCCTCACCCAAGAGAAAGAGGTAGGGCCTGTGCCTGCTaGCCAGTCAGCTGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: LCLSREISLPEPHPRERGRACAC*PVSCGW
Trigger: CCACCCACAGCTGACTGGGCAGCAGGCACAGGCCCT...ACCTCTTTCTCTTGGGTGAGGCTCTGGCAAGGAGATCTCTCTGCTCAAGCACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR GCA 90 bp CAAGACAAGGAAGTGAAAGGGACTGCCTATGAGCCCAGGATCTTGCCCTCAGGAAGGGCCTGTGCCTGCTaGCCAGTCAGCTGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: QDKEVKGTAYEPRILPSGRACAC*PVSCGW
Trigger: CCACCCACAGCTGACTGGGCAGCAGGCACAGGCCCT...TCCTGAGGGCAAGATCCTGGGCTCATAGGCAGTCCCTTTCACTTCCTTGTCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR GCA 90 bp CAAGACAAGGAAGTGAAAGGGACTGCCTATGAGCCCAGGATCTTGCCCTCAGGAGGTAGGGCCTGTGCCTaGTGCCCAGTCAGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: QDKEVKGTAYEPRILPSGGRACA*CPVSCG
Trigger: CCCACAGCTGACTGGGCAGCAGGCACAGGCCCTACC...TCCTGAGGGCAAGATCCTGGGCTCATAGGCAGTCCCTTTCACTTCCTTGTCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR GCA 90 bp GGTATCTGGAGAAATGTACACAGGCAGCCTCAGCTGGAGTCATGCGAGCCAACTGGTAGGGCCTGTGCCTaGTGCCCAGTCAGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: GIWRNVHRQPQLESCEPTGRACA*CPVSCG
Trigger: CCCACAGCTGACTGGGCAGCAGGCACAGGCCCTACC...AGTTGGCTCGCATGACTCCAGCTGAGGCTGCCTGTGTACATTTCTCCAGATACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR GCA 90 bp GCGCCGAGTACCAGTTTCAGCAAAGGTGCAGAGCTGTGGTATAGGGGTGAGGCATGGGCGGAAAAGGTCTaGCAGGTGCTGGGAGCCACT +
Preference number: 4 (lower is better)
Translates to: APSTSFSKGAELWYRGEAWAEKV*QVLGAT
Trigger: AGTGGCTCCCAGCACCTGGCAGACCTTTTCCGCCCA...TGCCTCACCCCTATACCACAGCTCTGCACCTTTGCTGAAACTGGTACTCGGCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491554.6
CDS-3UTR GCA 90 bp GGTATCTGGAGAAATGTACACAGGCAGCCTCAGCTGGAGTCATGCGAGCCAACTCAGGCCGAGTGGCCCTaGCCCGAACGCTGCAAATGC +
Preference number: 4 (lower is better)
Translates to: GIWRNVHRQPQLESCEPTQAEWP*PERCKC
Trigger: GCATTTGCAGCGTTCGGGGCAGGGCCACTCGGCCTG...AGTTGGCTCGCATGACTCCAGCTGAGGCTGCCTGTGTACATTTCTCCAGATACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650656.1
ENST00000651168.1
CDS-3UTR GCA 90 bp CTGTGCTTGAGCAGAGAGATCTCCTTGCCAGAGCCTCACCCAAGAGAAAGAGGTCCAGCTTCCAGCCAGTaGAACGGCCGCAGGCCGAGT +
Preference number: 4 (lower is better)
Translates to: LCLSREISLPEPHPRERGPASSQ*NGRRPS
Trigger: ACTCGGCCTGCGGCCGTTGCACTGGCTGGAAGCTGG...ACCTCTTTCTCTTGGGTGAGGCTCTGGCAAGGAGATCTCTCTGCTCAAGCACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650656.1
ENST00000651168.1
CDS-3UTR GCA 90 bp TGCTGTACAGGAGGAGCCAGTCTTCCAACAGTACACAAAAGCACGCTGTCCTCTCGCCGAAGGCGTTGCTaGCCTTGGACCGCACCCGAG +
Preference number: 4 (lower is better)
Translates to: CCTGGASLPTVHKSTLSSRRRRC*PWTAPE
Trigger: CTCGGGTGCGGTCCAAGGGCAGCAACGCCTTCGGCG...AGAGGACAGCGTGCTTTTGTGTACTGTTGGAAGACTGGCTCCTCCTGTACAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp GGACGTTCCAAGAAGGGGCTAAGCCGAGAGCGGAGCCTGAAGGAGCAGGCACTCCCAGGGCTACCTGTGTaGCACACTCAGCTGAGTAAA +
Preference number: 4 (lower is better)
Translates to: GRSKKGLSRERSLKEQALPGLPV*HTQLSK
Trigger: TTTACTCAGCTGAGTGTGCCACACAGGTAGCCCTGG...GAGTGCCTGCTCCTTCAGGCTCCGCTCTCGGCTTAGCCCCTTCTTGGAACGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491554.6
CDS-3UTR CCA 90 bp TGCTGTGGGCAGGGTGGGAAAGCCGCCACATCTCTACTTCCCAAGAAAGGCCACGATGCCCCGAGAAGCTaGCACAGCAGCCAGATCTGT +
Preference number: 4 (lower is better)
Translates to: CCGQGGKAATSLLPKKGHDAPRS*HSSQIC
Trigger: ACAGATCTGGCTGCTGTGCCAGCTTCTCGGGGCATC...GTGGCCTTTCTTGGGAAGTAGAGATGTGGCGGCTTTCCCACCCTGCCCACAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp CGAGTACCAGTTTCAGCAAAGGTGCAGAGCTGTGGTATAGGGGTGAGGCAGCAGATCCAAGAGGCGAGTTaGGGGAGCAGCACGCGGGGT +
Preference number: 4 (lower is better)
Translates to: RVPVSAKVQSCGIGVRQQIQEAS*GSSTRG
Trigger: ACCCCGCGTGCTGCTCCCCCAACTCGCCTCTTGGAT...CTGCTGCCTCACCCCTATACCACAGCTCTGCACCTTTGCTGAAACTGGTACTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000481262.6
ENST00000491554.6
CDS-3UTR CCA 90 bp AAGCCGAGAGCGGAGCCTGAAGGAGCAGGCACTCTTCGGGCAGGCTGCCATAGGAGGAAAGGAAGCTTCTaGTCTGAGATCCAAGAGGCG +
Preference number: 4 (lower is better)
Translates to: KPRAEPEGAGTLRAGCHRRKGSF*SEIQEA
Trigger: CGCCTCTTGGATCTCAGACCAGAAGCTTCCTTTCCT...CCTATGGCAGCCTGCCCGAAGAGTGCCTGCTCCTTCAGGCTCCGCTCTCGGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491554.6
CDS-3UTR CCA 90 bp GGTATCTGGAGAAATGTACACAGGCAGCCTCAGCTGGAGTCATGCGAGCCAACTAGCGAGTGGGCCCGCTaGGAAACGAAGCCGGCAAGC +
Preference number: 4 (lower is better)
Translates to: GIWRNVHRQPQLESCEPTSEWAR*ETKPAS
Trigger: GCTTGCCGGCTTCGTTTCCCAGCGGGCCCACTCGCT...AGTTGGCTCGCATGACTCCAGCTGAGGCTGCCTGTGTACATTTCTCCAGATACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp CCAGACCCATTCCCTTCTCAGATCACACTCTATCCAGACTGCTGTACAGTGCGGAGCGAGTGGGCCCGCTaGGAAACGAAGCCGGCAAGC +
Preference number: 4 (lower is better)
Translates to: PDPFPSQITLYPDCCTVRSEWAR*ETKPAS
Trigger: GCTTGCCGGCTTCGTTTCCCAGCGGGCCCACTCGCT...CCGCACTGTACAGCAGTCTGGATAGAGTGTGATCTGAGAAGGGAATGGGTCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp CAGGGCTTAGACAGACTGGATGAAGCGCCCCATTTTGCCACATTGTCTCCAGGCGCCGCCTCACCTCGCTaGTCCCAGCCCCTATCTCAT +
Preference number: 4 (lower is better)
Translates to: QGLDRLDEAPHFATLSPGAASPR*SQPLSH
Trigger: ATGAGATAGGGGCTGGGACCAGCGAGGTGAGGCGGC...GCCTGGAGACAATGTGGCAAAATGGGGCGCTTCATCCAGTCTGTCTAAGCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp ACCCAGACCCATTCCCTTCTCAGATCACACTCTATCCAGACTGCTGTACAGTGCGCCTACCCTGGGAGGTaGGCACCTGCATGCCCCCAG +
Preference number: 4 (lower is better)
Translates to: TQTHSLLRSHSIQTAVQCAYPGR*APACPQ
Trigger: CTGGGGGCATGCAGGTGCCCACCTCCCAGGGTAGGC...GCACTGTACAGCAGTCTGGATAGAGTGTGATCTGAGAAGGGAATGGGTCTGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp TGCTGTACAGGAGGAGCCAGTCTTCCAACAGTACACAAAAGCACGCTGTCCTCTACGGCCAGGACTGGATaGTGCCCGTGGCAGGGCGGT +
Preference number: 4 (lower is better)
Translates to: CCTGGASLPTVHKSTLSSTARTG*CPWQGG
Trigger: ACCGCCCTGCCACGGGCACCATCCAGTCCTGGCCGT...AGAGGACAGCGTGCTTTTGTGTACTGTTGGAAGACTGGCTCCTCCTGTACAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp TGCTGTGGGCAGGGTGGGAAAGCCGCCACATCTCTACTTCCCAAGAAAGGCCACGCTAGGAACAGCACTTaGCTGCAGGCCAGGACCAAG +
Preference number: 4 (lower is better)
Translates to: CCGQGGKAATSLLPKKGHARNST*LQARTK
Trigger: CTTGGTCCTGGCCTGCAGCCAAGTGCTGTTCCTAGC...GTGGCCTTTCTTGGGAAGTAGAGATGTGGCGGCTTTCCCACCCTGCCCACAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp GGGTATCTGGAGAAATGTACACAGGCAGCCTCAGCTGGAGTCATGCGAGCCAACAGGCGTTGCTGCCCTTaGACCGCACCCGAGCCAATC +
Preference number: 4 (lower is better)
Translates to: GYLEKCTQAASAGVMRANRRCCP*TAPEPI
Trigger: GATTGGCTCGGGTGCGGTCCAAGGGCAGCAACGCCT...GTTGGCTCGCATGACTCCAGCTGAGGCTGCCTGTGTACATTTCTCCAGATACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650656.1
ENST00000651168.1
CDS-3UTR TCA 90 bp CCCCAAGCGCCGAGTACCAGTTTCAGCAAAGGTGCAGAGCTGTGGTATAGGGGTGGTGCTGGGAGCCACTaGAGAATTTGCGGGGAGCTT +
Preference number: 4 (lower is better)
Translates to: PQAPSTSFSKGAELWYRGGAGSH*RICGEL
Trigger: AAGCTCCCCGCAAATTCTTCAGTGGCTCCCAGCACC...ACCCCTATACCACAGCTCTGCACCTTTGCTGAAACTGGTACTCGGCGCTTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000491554.6
CDS-3UTR TCA 90 bp ACCCAGACCCATTCCCTTCTCAGATCACACTCTATCCAGACTGCTGTACAGTGCCCGGAGCCGCCATACTaGACAGGGGCTGTGATGCCC +
Preference number: 4 (lower is better)
Translates to: TQTHSLLRSHSIQTAVQCPEPPY*TGAVMP
Trigger: GGGCATCACAGCCCCTGTTCAGTATGGCGGCTCCGG...GCACTGTACAGCAGTCTGGATAGAGTGTGATCTGAGAAGGGAATGGGTCTGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR TCA 90 bp GCCATAGGGTATCTGGAGAAATGTACACAGGCAGCCTCAGCTGGAGTCATGCGAAGTGGGCACCGTAACTaGGCCCCACTGCTCCGGAAG +
Preference number: 4 (lower is better)
Translates to: AIGYLEKCTQAASAGVMRSGHRN*APLLRK
Trigger: CTTCCGGAGCAGTGGGGCTCAGTTACGGTGCCCACT...TCGCATGACTCCAGCTGAGGCTGCCTGTGTACATTTCTCCAGATACCCTATGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR TCA 90 bp GGTATCTGGAGAAATGTACACAGGCAGCCTCAGCTGGAGTCATGCGAGCCAACTAGTGGGCACCGTAACTaGGCCCCACTGCTCCGGAAG +
Preference number: 4 (lower is better)
Translates to: GIWRNVHRQPQLESCEPTSGHRN*APLLRK
Trigger: CTTCCGGAGCAGTGGGGCTCAGTTACGGTGCCCACT...AGTTGGCTCGCATGACTCCAGCTGAGGCTGCCTGTGTACATTTCTCCAGATACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR TCA 90 bp CTGTGCTTGAGCAGAGAGATCTCCTTGCCAGAGCCTCACCCAAGAGAAAGAGGTAGTGGGCACCGTAACTaGGCCCCACTGCTCCGGAAG +
Preference number: 4 (lower is better)
Translates to: LCLSREISLPEPHPRERGSGHRN*APLLRK
Trigger: CTTCCGGAGCAGTGGGGCTCAGTTACGGTGCCCACT...ACCTCTTTCTCTTGGGTGAGGCTCTGGCAAGGAGATCTCTCTGCTCAAGCACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR TCA 90 bp TGCTGTGGGCAGGGTGGGAAAGCCGCCACATCTCTACTTCCCAAGAAAGGCCACTGCGTACAAGCTGGTTaGTGCAGAGGTTGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: CCGQGGKAATSLLPKKGHCVQAG*CRGWSG
Trigger: CCCACTCCAACCTCTGCATCAACCAGCTTGTACGCA...GTGGCCTTTCTTGGGAAGTAGAGATGTGGCGGCTTTCCCACCCTGCCCACAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR TCA 90 bp CAGGGCTTAGACAGACTGGATGAAGCGCCCCATTTTGCCACATTGTCTCCAGGCACTGCCGACACGCCATaGGGCGGGTGTACATGTCAG +
Preference number: 4 (lower is better)
Translates to: QGLDRLDEAPHFATLSPGTADTP*GGCTCQ
Trigger: CTGACATGTACACCCGCCTCATGGCGTGTCGGCAGT...GCCTGGAGACAATGTGGCAAAATGGGGCGCTTCATCCAGTCTGTCTAAGCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR TCA 90 bp GGTATCTGGAGAAATGTACACAGGCAGCCTCAGCTGGAGTCATGCGAGCCAACTCGGCTGCGAGGCCCATaGTGCTTGGGAGCTGTTGTG +
Preference number: 4 (lower is better)
Translates to: GIWRNVHRQPQLESCEPTRLRGP*CLGAVV
Trigger: CACAACAGCTCCCAAGCATCATGGGCCTCGCAGCCG...AGTTGGCTCGCATGACTCCAGCTGAGGCTGCCTGTGTACATTTCTCCAGATACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR TCA 90 bp CTGTGCTTGAGCAGAGAGATCTCCTTGCCAGAGCCTCACCCAAGAGAAAGAGGTCGGAACTGGGGTTGGTaGGGAGCCAACCCCACCTGT +
Preference number: 4 (lower is better)
Translates to: LCLSREISLPEPHPRERGRNWGW*GANPTC
Trigger: ACAGGTGGGGTTGGCTCCTCACCAACCCCAGTTCCG...ACCTCTTTCTCTTGGGTGAGGCTCTGGCAAGGAGATCTCTCTGCTCAAGCACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR TCA 90 bp GGTATCTGGAGAAATGTACACAGGCAGCCTCAGCTGGAGTCATGCGAGCCAACTCGGAACTGGGGTTGGTaGGGAGCCAACCCCACCTGT +
Preference number: 4 (lower is better)
Translates to: GIWRNVHRQPQLESCEPTRNWGW*GANPTC
Trigger: ACAGGTGGGGTTGGCTCCTCACCAACCCCAGTTCCG...AGTTGGCTCGCATGACTCCAGCTGAGGCTGCCTGTGTACATTTCTCCAGATACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR TCA 90 bp AAGCGCCGAGTACCAGTTTCAGCAAAGGTGCAGAGCTGTGGTATAGGGGTGAGGACACGTAATGGCTGCTaGGGACGAGGGAAGGCTGCC +
Preference number: 4 (lower is better)
Translates to: KRRVPVSAKVQSCGIGVRTRNGC*GRGKAA
Trigger: GGCAGCCTTCCCTCGTCCTCAGCAGCCATTACGTGT...CCTCACCCCTATACCACAGCTCTGCACCTTTGCTGAAACTGGTACTCGGCGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491554.6
CDS-3UTR TCA 90 bp GGGTATCTGGAGAAATGTACACAGGCAGCCTCAGCTGGAGTCATGCGAGCCAACCGAGCCAATCAACCGTaGTCGCCTGCCAGCTTCCAG +
Preference number: 4 (lower is better)
Translates to: GYLEKCTQAASAGVMRANRANQP*SPASFQ
Trigger: CTGGAAGCTGGCAGGCGATCACGGTTGATTGGCTCG...GTTGGCTCGCATGACTCCAGCTGAGGCTGCCTGTGTACATTTCTCCAGATACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650656.1
ENST00000651168.1
CDS-3UTR GCA 90 bp TGCTGTGGGCAGGGTGGGAAAGCCGCCACATCTCTACTTCCCAAGAAAGGCCACGTAACTGAGCCCCACTaGTCCGGAAGCTCGGGATAT +
Preference number: 4 (lower is better)
Translates to: CCGQGGKAATSLLPKKGHVTEPH*SGSSGY
Trigger: ATATCCCGAGCTTCCGGAGCAGTGGGGCTCAGTTAC...GTGGCCTTTCTTGGGAAGTAGAGATGTGGCGGCTTTCCCACCCTGCCCACAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR GCA 90 bp CTGTGCTTGAGCAGAGAGATCTCCTTGCCAGAGCCTCACCCAAGAGAAAGAGGTTGGTCCAGGACCGCTTaGATGAGCCCAAGAGGCCCC +
Preference number: 4 (lower is better)
Translates to: LCLSREISLPEPHPRERGWSRTA*MSPRGP
Trigger: GGGGCCTCTTGGGCTCATGCAAGCGGTCCTGGACCA...ACCTCTTTCTCTTGGGTGAGGCTCTGGCAAGGAGATCTCTCTGCTCAAGCACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR GCA 90 bp AAAGGAAGCTTCTGGTCTGAGATCCAAGAGGCGAGTTGGGGGAGCAGCACGCGGCAGGCAGGAGGATCTTaGATCTCAGTTCCCTCGCAG +
Preference number: 4 (lower is better)
Translates to: KGSFWSEIQEASWGSSTRQAGGS*ISVPSQ
Trigger: CTGCGAGGGAACTGAGATGCAAGATCCTCCTGCCTG...CCGCGTGCTGCTCCCCCAACTCGCCTCTTGGATCTCAGACCAGAAGCTTCCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000481262.6
ENST00000491554.6
CDS-3UTR GCA 90 bp GCCCTCCCTCCCAGGTGGGTGTTGGGCGGAAAAGGTCTGCCCAAAACACTGAATTGGTCCAGGACCGCTTaGATGAGCCAGGAATCTTGC +
Preference number: 4 (lower is better)
Translates to: ALPPRWVLGGKGLPKTLNWSRTA*MSQESC
Trigger: GCAAGATTCCTGGCTCATGCAAGCGGTCCTGGACCA...ATTCAGTGTTTTGGGCAGACCTTTTCCGCCCAACACCCACCTGGGAGGGAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481262.6
CDS-3UTR GCA 90 bp AAGCCGAGAGCGGAGCCTGAAGGAGCAGGCACTCTTCGGGCAGGCTGCCATAGGAAGCTTTGTAAACCCTaGCAAGGAGCTCTGTCCCAA +
Preference number: 4 (lower is better)
Translates to: KPRAEPEGAGTLRAGCHRKLCKP*QGALSQ
Trigger: TTGGGACAGAGCTCCTTGGCAGGGTTTACAAAGCTT...CCTATGGCAGCCTGCCCGAAGAGTGCCTGCTCCTTCAGGCTCCGCTCTCGGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491554.6
CDS-3UTR GCA 90 bp GGGTATCTGGAGAAATGTACACAGGCAGCCTCAGCTGGAGTCATGCGAGCCAACTCGCCCAGGCTGGAGTaGAATGGCACAAGCTCGGCT +
Preference number: 4 (lower is better)
Translates to: GYLEKCTQAASAGVMRANSPRLE*NGTSSA
Trigger: AGCCGAGCTTGTGCCATTGCACTCCAGCCTGGGCGA...GTTGGCTCGCATGACTCCAGCTGAGGCTGCCTGTGTACATTTCTCCAGATACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR GCA 90 bp TGCTGTGGGCAGGGTGGGAAAGCCGCCACATCTCTACTTCCCAAGAAAGGCCACACAAGGGCTCAGAGGTaGTGTACAGGAGGAGCCAGT +
Preference number: 4 (lower is better)
Translates to: CCGQGGKAATSLLPKKGHTRAQR*CTGGAS
Trigger: ACTGGCTCCTCCTGTACAGCACCTCTGAGCCCTTGT...GTGGCCTTTCTTGGGAAGTAGAGATGTGGCGGCTTTCCCACCCTGCCCACAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR GCA 90 bp TGCTGTACAGGAGGAGCCAGTCTTCCAACAGTACACAAAAGCACGCTGTCCTCTGGTAGGGCCTGTGCCTaGTGCCCAGTCAGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: CCTGGASLPTVHKSTLSSGRACA*CPVSCG
Trigger: CCCACAGCTGACTGGGCAGCAGGCACAGGCCCTACC...AGAGGACAGCGTGCTTTTGTGTACTGTTGGAAGACTGGCTCCTCCTGTACAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR GCA 90 bp CAGGGCTTAGACAGACTGGATGAAGCGCCCCATTTTGCCACATTGTCTCCAGGCGGAACAGCACTTGGCTaGAGGCCAGGACCAAGAGCC +
Preference number: 4 (lower is better)
Translates to: QGLDRLDEAPHFATLSPGGTALG*RPGPRA
Trigger: GGCTCTTGGTCCTGGCCTGCAGCCAAGTGCTGTTCC...GCCTGGAGACAATGTGGCAAAATGGGGCGCTTCATCCAGTCTGTCTAAGCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR GCA 90 bp ACCCAGACCCATTCCCTTCTCAGATCACACTCTATCCAGACTGCTGTACAGTGCCCCTGCCCCGAACGCTaGAAATGCTGGCGTGCTCCC +
Preference number: 4 (lower is better)
Translates to: TQTHSLLRSHSIQTAVQCPCPER*KCWRAP
Trigger: GGGAGCACGCCAGCATTTGCAGCGTTCGGGGCAGGG...GCACTGTACAGCAGTCTGGATAGAGTGTGATCTGAGAAGGGAATGGGTCTGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp TGCCGACACGCCATGAGGCGGGTGTACATGTCAGCCATCTTCCCCTGCATCAACCATTGGGCTCACTCATaGCCAGGGCTCCGATGTACT +
Preference number: 4 (lower is better)
Translates to: CRHAMRRVYMSAIFPCINHWAHS*PGLRCT
Trigger: AGTACATCGGAGCCCTGGCCATGAGTGAGCCCAATG...GTTGATGCAGGGGAAGATGGCTGACATGTACACCCGCCTCATGGCGTGTCGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481262.6
CDS-3UTR CCA 90 bp TGCTGTGGGCAGGGTGGGAAAGCCGCCACATCTCTACTTCCCAAGAAAGGCCACCATTGGGCTCACTCATaGCCAGGGCTCCGATGTACT +
Preference number: 4 (lower is better)
Translates to: CCGQGGKAATSLLPKKGHHWAHS*PGLRCT
Trigger: AGTACATCGGAGCCCTGGCCATGAGTGAGCCCAATG...GTGGCCTTTCTTGGGAAGTAGAGATGTGGCGGCTTTCCCACCCTGCCCACAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp GAGGCGGGTGTACATGTCAGCCATCTTCCCCTGCATCAACTGGAAGTGGCCGATCATCAGAGCCTGCATTaGGCTCACTCATGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: EAGVHVSHLPLHQLEVADHQSLH*AHSWPG
Trigger: CCCTGGCCATGAGTGAGCCCAATGCAGGCTCTGATG...ATCGGCCACTTCCAGTTGATGCAGGGGAAGATGGCTGACATGTACACCCGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481262.6
CDS-3UTR CCA 90 bp CCCAAGCGCCGAGTACCAGTTTCAGCAAAGGTGCAGAGCTGTGGTATAGGGGTGGATGCCCCGAGAAGCTaGCACAGCAGCCAGATCTGT +
Preference number: 4 (lower is better)
Translates to: PKRRVPVSAKVQSCGIGVDAPRS*HSSQIC
Trigger: ACAGATCTGGCTGCTGTGCCAGCTTCTCGGGGCATC...CACCCCTATACCACAGCTCTGCACCTTTGCTGAAACTGGTACTCGGCGCTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000481262.6
ENST00000491554.6
CDS-3UTR CCA 90 bp CCCAAGCGCCGAGTACCAGTTTCAGCAAAGGTGCAGAGCTGTGGTATAGGGGTGCGTGCAGGTAGGGAATaGTGTGGTCCAGGACCGCTT +
Preference number: 4 (lower is better)
Translates to: PKRRVPVSAKVQSCGIGVRAGRE*CGPGPL
Trigger: AAGCGGTCCTGGACCACACCATTCCCTACCTGCACG...CACCCCTATACCACAGCTCTGCACCTTTGCTGAAACTGGTACTCGGCGCTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481262.6
ENST00000491554.6
CDS-3UTR CCA 90 bp TGGGTAGGGCCACCTAAGCTTTGTAAACCCTGCCAAGGAGCTCTGTCCCAAAGAGCCCTCCCTCCCAGGTaGGTGTTGGGCGGAAAAGGT +
Preference number: 4 (lower is better)
Translates to: WVGPPKLCKPCQGALSQRALPPR*VLGGKG
Trigger: ACCTTTTCCGCCCAACACCCACCTGGGAGGGAGGGC...TCTTTGGGACAGAGCTCCTTGGCAGGGTTTACAAAGCTTAGGTGGCCCTACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481262.6
ENST00000491554.6
CDS-3UTR CCA 90 bp ACCCAGACCCATTCCCTTCTCAGATCACACTCTATCCAGACTGCTGTACAGTGCAGCGAGTGGGCCCGCTaGGAAACGAAGCCGGCAAGC +
Preference number: 4 (lower is better)
Translates to: TQTHSLLRSHSIQTAVQCSEWAR*ETKPAS
Trigger: GCTTGCCGGCTTCGTTTCCCAGCGGGCCCACTCGCT...GCACTGTACAGCAGTCTGGATAGAGTGTGATCTGAGAAGGGAATGGGTCTGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp CTGTGCTTGAGCAGAGAGATCTCCTTGCCAGAGCCTCACCCAAGAGAAAGAGGTGCTGACAAGAGCAGCTaGGCAGGAGGGCCTGCTGTG +
Preference number: 4 (lower is better)
Translates to: LCLSREISLPEPHPRERGADKSS*AGGPAV
Trigger: CACAGCAGGCCCTCCTGCCCAGCTGCTCTTGTCAGC...ACCTCTTTCTCTTGGGTGAGGCTCTGGCAAGGAGATCTCTCTGCTCAAGCACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp TGCTGTACAGGAGGAGCCAGTCTTCCAACAGTACACAAAAGCACGCTGTCCTCTTCACACGGCCAGGACTaGATGGTGCCCGTGGCAGGG +
Preference number: 4 (lower is better)
Translates to: CCTGGASLPTVHKSTLSSSHGQD*MVPVAG
Trigger: CCCTGCCACGGGCACCATCCAGTCCTGGCCGTGTGA...AGAGGACAGCGTGCTTTTGTGTACTGTTGGAAGACTGGCTCCTCCTGTACAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp GCCATAGGGTATCTGGAGAAATGTACACAGGCAGCCTCAGCTGGAGTCATGCGACCAGTCAGCTGTGGGTaGTCACACGGCCAGGACTGG +
Preference number: 4 (lower is better)
Translates to: AIGYLEKCTQAASAGVMRPVSCG*SHGQDW
Trigger: CCAGTCCTGGCCGTGTGACCACCCACAGCTGACTGG...TCGCATGACTCCAGCTGAGGCTGCCTGTGTACATTTCTCCAGATACCCTATGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp CTGTGCTTGAGCAGAGAGATCTCCTTGCCAGAGCCTCACCCAAGAGAAAGAGGTCTGCCCAGTCAGCTGTaGGTGGTCACACGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: LCLSREISLPEPHPRERGLPSQL*VVTRPG
Trigger: TCCTGGCCGTGTGACCACCCACAGCTGACTGGGCAG...ACCTCTTTCTCTTGGGTGAGGCTCTGGCAAGGAGATCTCTCTGCTCAAGCACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp TGCTGTGGGCAGGGTGGGAAAGCCGCCACATCTCTACTTCCCAAGAAAGGCCACAGTGCGGCCCAAAGCTaGAATTCTCAGAACACCCCC +
Preference number: 4 (lower is better)
Translates to: CCGQGGKAATSLLPKKGHSAAQS*NSQNTP
Trigger: GGGGGTGTTCTGAGAATTCCAGCTTTGGGCCGCACT...GTGGCCTTTCTTGGGAAGTAGAGATGTGGCGGCTTTCCCACCCTGCCCACAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR TCA 90 bp GAAAGTTTGAAGGGCTGGAAGGACTTCCAGAGCTGCCCCAGACCAAAGGCACAGGCATGGCCAAAACACTaGATGCCGTCCAGGGCTACC +
Preference number: 4 (lower is better)
Translates to: ESLKGWKDFQSCPRPKAQAWPKH*MPSRAT
Trigger: GGTAGCCCTGGACGGCATTCAGTGTTTTGGCCATGC...CTGTGCCTTTGGTCTGGGGCAGCTCTGGAAGTCCTTCCAGCCCTTCAAACTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466756.2
CDS-3UTR TCA 90 bp CAAGACAAGGAAGTGAAAGGGACTGCCTATGAGCCCAGGATCTTGCCCTCAGGAACTGCCGACACGCCATaGGGCGGGTGTACATGTCAG +
Preference number: 4 (lower is better)
Translates to: QDKEVKGTAYEPRILPSGTADTP*GGCTCQ
Trigger: CTGACATGTACACCCGCCTCATGGCGTGTCGGCAGT...TCCTGAGGGCAAGATCCTGGGCTCATAGGCAGTCCCTTTCACTTCCTTGTCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR TCA 90 bp GGGTATCTGGAGAAATGTACACAGGCAGCCTCAGCTGGAGTCATGCGAGCCAACCCTCGCTTAGCCCATTaGTTGCATCGTCCACGGGCA +
Preference number: 4 (lower is better)
Translates to: GYLEKCTQAASAGVMRANPRLAH*LHRPRA
Trigger: TGCCCGTGGACGATGCAATCAATGGGCTAAGCGAGG...GTTGGCTCGCATGACTCCAGCTGAGGCTGCCTGTGTACATTTCTCCAGATACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR TCA 90 bp GGTATCTGGAGAAATGTACACAGGCAGCCTCAGCTGGAGTCATGCGAGCCAACTCTGGGAAAGGGAGGCTaGGACCTCTCTCCTAAGGGC +
Preference number: 4 (lower is better)
Translates to: GIWRNVHRQPQLESCEPTLGKGG*DLSPKG
Trigger: GCCCTTAGGAGAGAGGTCTCAGCCTCCCTTTCCCAG...AGTTGGCTCGCATGACTCCAGCTGAGGCTGCCTGTGTACATTTCTCCAGATACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR TCA 90 bp ACCCAGACCCATTCCCTTCTCAGATCACACTCTATCCAGACTGCTGTACAGTGCCGGAACTGGGGTTGGTaGGGAGCCAACCCCACCTGT +
Preference number: 4 (lower is better)
Translates to: TQTHSLLRSHSIQTAVQCRNWGW*GANPTC
Trigger: ACAGGTGGGGTTGGCTCCTCACCAACCCCAGTTCCG...GCACTGTACAGCAGTCTGGATAGAGTGTGATCTGAGAAGGGAATGGGTCTGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR TCA 90 bp GGGTATCTGGAGAAATGTACACAGGCAGCCTCAGCTGGAGTCATGCGAGCCAACGAAAGGGACTGCCTATaGGCCCAGGATCTTGCCCTC +
Preference number: 4 (lower is better)
Translates to: GYLEKCTQAASAGVMRANERDCL*AQDLAL
Trigger: GAGGGCAAGATCCTGGGCTCATAGGCAGTCCCTTTC...GTTGGCTCGCATGACTCCAGCTGAGGCTGCCTGTGTACATTTCTCCAGATACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR TCA 90 bp TGCTGTGGGCAGGGTGGGAAAGCCGCCACATCTCTACTTCCCAAGAAAGGCCACCTTAGACAGACTGGATaGAGCGCCCCATTTTGCCAC +
Preference number: 4 (lower is better)
Translates to: CCGQGGKAATSLLPKKGHLRQTG*SAPFCH
Trigger: GTGGCAAAATGGGGCGCTTCATCCAGTCTGTCTAAG...GTGGCCTTTCTTGGGAAGTAGAGATGTGGCGGCTTTCCCACCCTGCCCACAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR TCA 90 bp CCAGACCCATTCCCTTCTCAGATCACACTCTATCCAGACTGCTGTACAGTGCGGGGGGCCAGGTGCTCCTaGAGGAACTTAGCCATGGTC +
Preference number: 4 (lower is better)
Translates to: PDPFPSQITLYPDCCTVRGARCS*RNLAMV
Trigger: GACCATGGCTAAGTTCCTTCAGGAGCACCTGGCCCC...CCGCACTGTACAGCAGTCTGGATAGAGTGTGATCTGAGAAGGGAATGGGTCTGG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000487418.8
ENST00000651168.1
CDS-3UTR GCA 90 bp GCGCCGAGTACCAGTTTCAGCAAAGGTGCAGAGCTGTGGTATAGGGGTGAGGCACAGGCAGGAGGATCTTaGATCTCAGTTCCCTCGCAG +
Preference number: 4 (lower is better)
Translates to: APSTSFSKGAELWYRGEAQAGGS*ISVPSQ
Trigger: CTGCGAGGGAACTGAGATGCAAGATCCTCCTGCCTG...TGCCTCACCCCTATACCACAGCTCTGCACCTTTGCTGAAACTGGTACTCGGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481262.6
ENST00000491554.6
CDS-3UTR GCA 90 bp CCCCAAGCGCCGAGTACCAGTTTCAGCAAAGGTGCAGAGCTGTGGTATAGGGGTTCAGCCATCTTCCCCTaGATCAACTGGAAGTGGCCG +
Preference number: 4 (lower is better)
Translates to: PQAPSTSFSKGAELWYRGSAIFP*INWKWP
Trigger: CGGCCACTTCCAGTTGATGCAGGGGAAGATGGCTGA...ACCCCTATACCACAGCTCTGCACCTTTGCTGAAACTGGTACTCGGCGCTTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000481262.6
ENST00000491554.6
CDS-3UTR GCA 90 bp CGCCGAGTACCAGTTTCAGCAAAGGTGCAGAGCTGTGGTATAGGGGTGAGGCAGGCCCAAAACACTGAATaGCGTCCAGGGCTACCTGTG +
Preference number: 4 (lower is better)
Translates to: RRVPVSAKVQSCGIGVRQAQNTE*RPGLPV
Trigger: CACAGGTAGCCCTGGACGGCATTCAGTGTTTTGGGC...CTGCCTCACCCCTATACCACAGCTCTGCACCTTTGCTGAAACTGGTACTCGGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481262.6
CDS-3UTR GCA 90 bp CAAGACAAGGAAGTGAAAGGGACTGCCTATGAGCCCAGGATCTTGCCCTCAGGACGCAGTCGCCATCTCTaGCATGCACGAAGAGCCAGC +
Preference number: 4 (lower is better)
Translates to: QDKEVKGTAYEPRILPSGRSRHL*HARRAS
Trigger: GCTGGCTCTTCGTGCATGGCAGAGATGGCGACTGCG...TCCTGAGGGCAAGATCCTGGGCTCATAGGCAGTCCCTTTCACTTCCTTGTCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR GCA 90 bp GCCATAGGGTATCTGGAGAAATGTACACAGGCAGCCTCAGCTGGAGTCATGCGACGCAGTCGCCATCTCTaGCATGCACGAAGAGCCAGC +
Preference number: 4 (lower is better)
Translates to: AIGYLEKCTQAASAGVMRRSRHL*HARRAS
Trigger: GCTGGCTCTTCGTGCATGGCAGAGATGGCGACTGCG...TCGCATGACTCCAGCTGAGGCTGCCTGTGTACATTTCTCCAGATACCCTATGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR GCA 90 bp CTGTGCTTGAGCAGAGAGATCTCCTTGCCAGAGCCTCACCCAAGAGAAAGAGGTTCGCCCAGGCTGGAGTaGAATGGCACAAGCTCGGCT +
Preference number: 4 (lower is better)
Translates to: LCLSREISLPEPHPRERGSPRLE*NGTSSA
Trigger: AGCCGAGCTTGTGCCATTGCACTCCAGCCTGGGCGA...ACCTCTTTCTCTTGGGTGAGGCTCTGGCAAGGAGATCTCTCTGCTCAAGCACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR GCA 90 bp TGCTGTGGGCAGGGTGGGAAAGCCGCCACATCTCTACTTCCCAAGAAAGGCCACAGGCACACACCACCTTaGCTGGCCAAGCAAGCATAT +
Preference number: 4 (lower is better)
Translates to: CCGQGGKAATSLLPKKGHRHTPP*LAKQAY
Trigger: ATATGCTTGCTTGGCCAGGCAAGGTGGTGTGTGCCT...GTGGCCTTTCTTGGGAAGTAGAGATGTGGCGGCTTTCCCACCCTGCCCACAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR GCA 90 bp GCCATAGGGTATCTGGAGAAATGTACACAGGCAGCCTCAGCTGGAGTCATGCGACGCGATCTCAGCTCCTaGAACCTCTGCCTCCTGCGT +
Preference number: 4 (lower is better)
Translates to: AIGYLEKCTQAASAGVMRRDLSS*NLCLLR
Trigger: ACGCAGGAGGCAGAGGTTGCAGGAGCTGAGATCGCG...TCGCATGACTCCAGCTGAGGCTGCCTGTGTACATTTCTCCAGATACCCTATGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR GCA 90 bp TGCTGTGGGCAGGGTGGGAAAGCCGCCACATCTCTACTTCCCAAGAAAGGCCACAGCCAGGATAGGTGCTaGTGGGCTGAGAACCAAGAA +
Preference number: 4 (lower is better)
Translates to: CCGQGGKAATSLLPKKGHSQDRC*WAENQE
Trigger: TTCTTGGTTCTCAGCCCAGCAGCACCTATCCTGGCT...GTGGCCTTTCTTGGGAAGTAGAGATGTGGCGGCTTTCCCACCCTGCCCACAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR GCA 90 bp CTGTGCTTGAGCAGAGAGATCTCCTTGCCAGAGCCTCACCCAAGAGAAAGAGGTGGAACAGCACTTGGCTaGAGGCCAGGACCAAGAGCC +
Preference number: 4 (lower is better)
Translates to: LCLSREISLPEPHPRERGGTALG*RPGPRA
Trigger: GGCTCTTGGTCCTGGCCTGCAGCCAAGTGCTGTTCC...ACCTCTTTCTCTTGGGTGAGGCTCTGGCAAGGAGATCTCTCTGCTCAAGCACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR GCA 90 bp CCAGACCCATTCCCTTCTCAGATCACACTCTATCCAGACTGCTGTACAGTGCGGGGAACAGCACTTGGCTaGAGGCCAGGACCAAGAGCC +
Preference number: 4 (lower is better)
Translates to: PDPFPSQITLYPDCCTVRGTALG*RPGPRA
Trigger: GGCTCTTGGTCCTGGCCTGCAGCCAAGTGCTGTTCC...CCGCACTGTACAGCAGTCTGGATAGAGTGTGATCTGAGAAGGGAATGGGTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp GCAGCAGAAGGGGAAGGCCCAGGGGGATCAGAGTCATATTTGCCTTGCCAAGCCCCAGGGCTACCTGTGTaGCACACTCAGCTGAGTAAA +
Preference number: 4 (lower is better)
Translates to: AAEGEGPGGSESYLPCQAPGLPV*HTQLSK
Trigger: TTTACTCAGCTGAGTGTGCCACACAGGTAGCCCTGG...GGCTTGGCAAGGCAAATATGACTCTGATCCCCCTGGGCCTTCCCCTTCTGCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000466756.2
CDS-3UTR CCA 90 bp CAGGGCTTAGACAGACTGGATGAAGCGCCCCATTTTGCCACATTGTCTCCAGGCCATCAGAGCCTGCATTaGGCTCACTCATGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: QGLDRLDEAPHFATLSPGHQSLH*AHSWPG
Trigger: CCCTGGCCATGAGTGAGCCCAATGCAGGCTCTGATG...GCCTGGAGACAATGTGGCAAAATGGGGCGCTTCATCCAGTCTGTCTAAGCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp CAGGGCTTAGACAGACTGGATGAAGCGCCCCATTTTGCCACATTGTCTCCAGGCGATGCCCCGAGAAGCTaGCACAGCAGCCAGATCTGT +
Preference number: 4 (lower is better)
Translates to: QGLDRLDEAPHFATLSPGDAPRS*HSSQIC
Trigger: ACAGATCTGGCTGCTGTGCCAGCTTCTCGGGGCATC...GCCTGGAGACAATGTGGCAAAATGGGGCGCTTCATCCAGTCTGTCTAAGCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp GGGTATCTGGAGAAATGTACACAGGCAGCCTCAGCTGGAGTCATGCGAGCCAACGATGCCCCGAGAAGCTaGCACAGCAGCCAGATCTGT +
Preference number: 4 (lower is better)
Translates to: GYLEKCTQAASAGVMRANDAPRS*HSSQIC
Trigger: ACAGATCTGGCTGCTGTGCCAGCTTCTCGGGGCATC...GTTGGCTCGCATGACTCCAGCTGAGGCTGCCTGTGTACATTTCTCCAGATACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp GGGTATCTGGAGAAATGTACACAGGCAGCCTCAGCTGGAGTCATGCGAGCCAACCGTGCAGGTAGGGAATaGTGTGGTCCAGGACCGCTT +
Preference number: 4 (lower is better)
Translates to: GYLEKCTQAASAGVMRANRAGRE*CGPGPL
Trigger: AAGCGGTCCTGGACCACACCATTCCCTACCTGCACG...GTTGGCTCGCATGACTCCAGCTGAGGCTGCCTGTGTACATTTCTCCAGATACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp CGCCGAGTACCAGTTTCAGCAAAGGTGCAGAGCTGTGGTATAGGGGTGAGGCAGTCCTTAGCAGTGCAATaGCCCTCATCGCAGGCCTTG +
Preference number: 4 (lower is better)
Translates to: RRVPVSAKVQSCGIGVRQSLAVQ*PSSQAL
Trigger: CAAGGCCTGCGATGAGGGCCATTGCACTGCTAAGGA...CTGCCTCACCCCTATACCACAGCTCTGCACCTTTGCTGAAACTGGTACTCGGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481262.6
ENST00000491554.6
CDS-3UTR CCA 90 bp GCGCCGAGTACCAGTTTCAGCAAAGGTGCAGAGCTGTGGTATAGGGGTGAGGCATCCTTAGCAGTGCAATaGCCCTCATCGCAGGCCTTG +
Preference number: 4 (lower is better)
Translates to: APSTSFSKGAELWYRGEASLAVQ*PSSQAL
Trigger: CAAGGCCTGCGATGAGGGCCATTGCACTGCTAAGGA...TGCCTCACCCCTATACCACAGCTCTGCACCTTTGCTGAAACTGGTACTCGGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481262.6
ENST00000491554.6
CDS-3UTR CCA 90 bp GGAAAGGAAGCTTCTGGTCTGAGATCCAAGAGGCGAGTTGGGGGAGCAGCACGCAAAGGTGCAGAGCTGTaGTATAGGGGTGAGGCAGCA +
Preference number: 4 (lower is better)
Translates to: GKEASGLRSKRRVGGAARKGAEL*YRGEAA
Trigger: TGCTGCCTCACCCCTATACCACAGCTCTGCACCTTT...GCGTGCTGCTCCCCCAACTCGCCTCTTGGATCTCAGACCAGAAGCTTCCTTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000481262.6
ENST00000491554.6
CDS-3UTR CCA 90 bp TGGGAAAGGGAGGCTGAGACCTCTCTCCTAAGGGCTGATTTTACCTTCCTGTCCACGGGCAAAAGCGAGTaGGCCCGCTGGGAAACGAAG +
Preference number: 4 (lower is better)
Translates to: WEREAETSLLRADFTFLSTGKSE*ARWETK
Trigger: CTTCGTTTCCCAGCGGGCCCACTCGCTTTTGCCCGT...GGACAGGAAGGTAAAATCAGCCCTTAGGAGAGAGGTCTCAGCCTCCCTTTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp CTGTGCTTGAGCAGAGAGATCTCCTTGCCAGAGCCTCACCCAAGAGAAAGAGGTCTGCTGTGGGCAGGGTaGGAAAGCCGCCACATCTCT +
Preference number: 4 (lower is better)
Translates to: LCLSREISLPEPHPRERGLLWAG*ESRHIS
Trigger: AGAGATGTGGCGGCTTTCCCACCCTGCCCACAGCAG...ACCTCTTTCTCTTGGGTGAGGCTCTGGCAAGGAGATCTCTCTGCTCAAGCACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp CCAGACCCATTCCCTTCTCAGATCACACTCTATCCAGACTGCTGTACAGTGCGGCTGCTGTGGGCAGGGTaGGAAAGCCGCCACATCTCT +
Preference number: 4 (lower is better)
Translates to: PDPFPSQITLYPDCCTVRLLWAG*ESRHIS
Trigger: AGAGATGTGGCGGCTTTCCCACCCTGCCCACAGCAG...CCGCACTGTACAGCAGTCTGGATAGAGTGTGATCTGAGAAGGGAATGGGTCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp TGCTGTGGGCAGGGTGGGAAAGCCGCCACATCTCTACTTCCCAAGAAAGGCCACTGTTGGTCGTCAGGCTaGTCTCGAACTCCTGACCTT +
Preference number: 4 (lower is better)
Translates to: CCGQGGKAATSLLPKKGHCWSSG*SRTPDL
Trigger: AAGGTCAGGAGTTCGAGACCAGCCTGACGACCAACA...GTGGCCTTTCTTGGGAAGTAGAGATGTGGCGGCTTTCCCACCCTGCCCACAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp TGCTGTACAGGAGGAGCCAGTCTTCCAACAGTACACAAAAGCACGCTGTCCTCTCCAGTCAGCTGTGGGTaGTCACACGGCCAGGACTGG +
Preference number: 4 (lower is better)
Translates to: CCTGGASLPTVHKSTLSSPVSCG*SHGQDW
Trigger: CCAGTCCTGGCCGTGTGACCACCCACAGCTGACTGG...AGAGGACAGCGTGCTTTTGTGTACTGTTGGAAGACTGGCTCCTCCTGTACAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp TGCTGTACAGGAGGAGCCAGTCTTCCAACAGTACACAAAAGCACGCTGTCCTCTCTGCCCAGTCAGCTGTaGGTGGTCACACGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: CCTGGASLPTVHKSTLSSLPSQL*VVTRPG
Trigger: TCCTGGCCGTGTGACCACCCACAGCTGACTGGGCAG...AGAGGACAGCGTGCTTTTGTGTACTGTTGGAAGACTGGCTCCTCCTGTACAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp GGGTATCTGGAGAAATGTACACAGGCAGCCTCAGCTGGAGTCATGCGAGCCAACACAGGCAGCCTCAGCTaGAGTCATGCGAGCCAACTC +
Preference number: 4 (lower is better)
Translates to: GYLEKCTQAASAGVMRANTGSLS*SHASQL
Trigger: GAGTTGGCTCGCATGACTCCAGCTGAGGCTGCCTGT...GTTGGCTCGCATGACTCCAGCTGAGGCTGCCTGTGTACATTTCTCCAGATACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp GGGTATCTGGAGAAATGTACACAGGCAGCCTCAGCTGGAGTCATGCGAGCCAACGCTAGGAACAGCACTTaGCTGCAGGCCAGGACCAAG +
Preference number: 4 (lower is better)
Translates to: GYLEKCTQAASAGVMRANARNST*LQARTK
Trigger: CTTGGTCCTGGCCTGCAGCCAAGTGCTGTTCCTAGC...GTTGGCTCGCATGACTCCAGCTGAGGCTGCCTGTGTACATTTCTCCAGATACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp TGGGAAAGGGAGGCTGAGACCTCTCTCCTAAGGGCTGATTTTACCTTCCTGTCCAAACCGGCTAGGGGGTaGGCTGCAGCAGCCAATCAC +
Preference number: 4 (lower is better)
Translates to: WEREAETSLLRADFTFLSKPARG*AAAANH
Trigger: GTGATTGGCTGCTGCAGCCCACCCCCTAGCCGGTTT...GGACAGGAAGGTAAAATCAGCCCTTAGGAGAGAGGTCTCAGCCTCCCTTTCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000650656.1
ENST00000651168.1
3UTR CAA 72 bp AAGGAAGTGAAAGGGACTGCCTATGAGCCCAGGATCTaGCCCTCAGGATGGGACGGAACTGGGGTTGGTGAG +
Preference number: 4 (lower is better)
Translates to: KEVKGTAYEPRI*PSGWDGTGVGE
Trigger: CTCACCAACCCCAGTTCCGTCCCATCCTGAGGGCAAGATCCTGGGCTCATAGGCAGTCCCTTTCACTTCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR TCA 90 bp AGAAAGTTTGAAGGGCTGGAAGGACTTCCAGAGCTGCCCCAGACCAAAGGCACAGGTGCTGGGAGCCACTaGAGAATTTGCGGGGAGCTT +
Preference number: 4 (lower is better)
Translates to: RKFEGLEGLPELPQTKGTGAGSH*RICGEL
Trigger: AAGCTCCCCGCAAATTCTTCAGTGGCTCCCAGCACC...TGTGCCTTTGGTCTGGGGCAGCTCTGGAAGTCCTTCCAGCCCTTCAAACTTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466756.2
CDS-3UTR TCA 90 bp AAGAGAAAGTTTGAAGGGCTGGAAGGACTTCCAGAGCTGCCCCAGACCAAAGGCAGGCAGGCCCTGGCCTaGGGCTTTAGAGATGAGGAA +
Preference number: 4 (lower is better)
Translates to: KRKFEGLEGLPELPQTKGRQALA*GFRDEE
Trigger: TTCCTCATCTCTAAAGCCTCAGGCCAGGGCCTGCCT...GCCTTTGGTCTGGGGCAGCTCTGGAAGTCCTTCCAGCCCTTCAAACTTTCTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466756.2
CDS-3UTR TCA 90 bp CAAGACAAGGAAGTGAAAGGGACTGCCTATGAGCCCAGGATCTTGCCCTCAGGAACTGAACAGGGGCTGTaGTGCCCAATACGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: QDKEVKGTAYEPRILPSGTEQGL*CPIRPG
Trigger: ACCTGGGCGTATTGGGCATCACAGCCCCTGTTCAGT...TCCTGAGGGCAAGATCCTGGGCTCATAGGCAGTCCCTTTCACTTCCTTGTCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR TCA 90 bp TGCTGTACAGGAGGAGCCAGTCTTCCAACAGTACACAAAAGCACGCTGTCCTCTACTGCCGACACGCCATaGGGCGGGTGTACATGTCAG +
Preference number: 4 (lower is better)
Translates to: CCTGGASLPTVHKSTLSSTADTP*GGCTCQ
Trigger: CTGACATGTACACCCGCCTCATGGCGTGTCGGCAGT...AGAGGACAGCGTGCTTTTGTGTACTGTTGGAAGACTGGCTCCTCCTGTACAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR TCA 90 bp CAAGACAAGGAAGTGAAAGGGACTGCCTATGAGCCCAGGATCTTGCCCTCAGGACCTCGCTTAGCCCATTaGTTGCATCGTCCACGGGCA +
Preference number: 4 (lower is better)
Translates to: QDKEVKGTAYEPRILPSGPRLAH*LHRPRA
Trigger: TGCCCGTGGACGATGCAATCAATGGGCTAAGCGAGG...TCCTGAGGGCAAGATCCTGGGCTCATAGGCAGTCCCTTTCACTTCCTTGTCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR TCA 90 bp GGGTATCTGGAGAAATGTACACAGGCAGCCTCAGCTGGAGTCATGCGAGCCAACTTGCCACCAAAACACTaGATGCCGTCCAGGGCTACC +
Preference number: 4 (lower is better)
Translates to: GYLEKCTQAASAGVMRANLPPKH*MPSRAT
Trigger: GGTAGCCCTGGACGGCATTCAGTGTTTTGGTGGCAA...GTTGGCTCGCATGACTCCAGCTGAGGCTGCCTGTGTACATTTCTCCAGATACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR TCA 90 bp GCCATAGGGTATCTGGAGAAATGTACACAGGCAGCCTCAGCTGGAGTCATGCGAACTCCTGACTGCAAGTaGTCCACCTGCCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: AIGYLEKCTQAASAGVMRTPDCK*STCLGL
Trigger: GAGGCCAAGGCAGGTGGATCACTTGCAGTCAGGAGT...TCGCATGACTCCAGCTGAGGCTGCCTGTGTACATTTCTCCAGATACCCTATGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR TCA 90 bp GGTATCTGGAGAAATGTACACAGGCAGCCTCAGCTGGAGTCATGCGAGCCAACTACTCCTGACTGCAAGTaGTCCACCTGCCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: GIWRNVHRQPQLESCEPTTPDCK*STCLGL
Trigger: GAGGCCAAGGCAGGTGGATCACTTGCAGTCAGGAGT...AGTTGGCTCGCATGACTCCAGCTGAGGCTGCCTGTGTACATTTCTCCAGATACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR TCA 90 bp CCAGACCCATTCCCTTCTCAGATCACACTCTATCCAGACTGCTGTACAGTGCGGCCTTCCTGTCCCTCATaGAAGAACGGGCTGGAGGAC +
Preference number: 4 (lower is better)
Translates to: PDPFPSQITLYPDCCTVRPSCPS*KNGLED
Trigger: GTCCTCCAGCCCGTTCTTTCATGAGGGACAGGAAGG...CCGCACTGTACAGCAGTCTGGATAGAGTGTGATCTGAGAAGGGAATGGGTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR GCA 90 bp GCTGGAAGGACTTCCAGAGCTGCCCCAGACCAAAGGCACAGGGATGAGAAACATGGCCAAAACACTGAATaGCGTCCAGGGCTACCTGTG +
Preference number: 4 (lower is better)
Translates to: AGRTSRAAPDQRHRDEKHGQNTE*RPGLPV
Trigger: CACAGGTAGCCCTGGACGGCATTCAGTGTTTTGGCC...ATGTTTCTCATCCCTGTGCCTTTGGTCTGGGGCAGCTCTGGAAGTCCTTCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466756.2
CDS-3UTR GCA 90 bp GGGCCACCTAAGCTTTGTAAACCCTGCCAAGGAGCTCTGTCCCAAAGACGTTGGGGCCAAAACACTGAATaGCGTCCAGGGCTACCTGTG +
Preference number: 4 (lower is better)
Translates to: GPPKLCKPCQGALSQRRWGQNTE*RPGLPV
Trigger: CACAGGTAGCCCTGGACGGCATTCAGTGTTTTGGCC...CCAACGTCTTTGGGACAGAGCTCCTTGGCAGGGTTTACAAAGCTTAGGTGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491554.6
CDS-3UTR GCA 90 bp GAAAGTTTGAAGGGCTGGAAGGACTTCCAGAGCTGCCCCAGACCAAAGGCACAGAAGGACTTCCAGAGCTaGCCCAGACCAAAGGCACAG +
Preference number: 4 (lower is better)
Translates to: ESLKGWKDFQSCPRPKAQKDFQS*PRPKAQ
Trigger: CTGTGCCTTTGGTCTGGGGCAGCTCTGGAAGTCCTT...CTGTGCCTTTGGTCTGGGGCAGCTCTGGAAGTCCTTCCAGCCCTTCAAACTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466756.2
CDS-3UTR GCA 90 bp TGCTGTGGGCAGGGTGGGAAAGCCGCCACATCTCTACTTCCCAAGAAAGGCCACGCCATGATTCTGCTGTaGTTGAGCAGAGAGATCTCC +
Preference number: 4 (lower is better)
Translates to: CCGQGGKAATSLLPKKGHAMILL*LSREIS
Trigger: GGAGATCTCTCTGCTCAAGCACAGCAGAATCATGGC...GTGGCCTTTCTTGGGAAGTAGAGATGTGGCGGCTTTCCCACCCTGCCCACAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR GCA 90 bp TGCTGTGGGCAGGGTGGGAAAGCCGCCACATCTCTACTTCCCAAGAAAGGCCACCTCAGCCTCCTGAAGTaGTGGGATTACAAGCATGAG +
Preference number: 4 (lower is better)
Translates to: CCGQGGKAATSLLPKKGHLSLLK*WDYKHE
Trigger: CTCATGCTTGTAATCCCAGCACTTCAGGAGGCTGAG...GTGGCCTTTCTTGGGAAGTAGAGATGTGGCGGCTTTCCCACCCTGCCCACAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR GCA 90 bp CAGGGCTTAGACAGACTGGATGAAGCGCCCCATTTTGCCACATTGTCTCCAGGCAGCTCCTGCAACCTCTaGCTCCTGCGTTCAAGCGAT +
Preference number: 4 (lower is better)
Translates to: QGLDRLDEAPHFATLSPGSSCNL*LLRSSD
Trigger: ATCGCTTGAACGCAGGAGGCAGAGGTTGCAGGAGCT...GCCTGGAGACAATGTGGCAAAATGGGGCGCTTCATCCAGTCTGTCTAAGCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR GCA 90 bp AGCAAGATGGCCCTTTTAGTCACATTCATCTCCAACATAGCAGGGAGCAAGACAGAGCCAACTCCGGCCTaGTCGGGTAGGGCCTGTGCC +
Preference number: 4 (lower is better)
Translates to: SKMALLVTFISNIAGSKTEPTPA*SGRACA
Trigger: GGCACAGGCCCTACCCGAGCAGGCCGGAGTTGGCTC...TGTCTTGCTCCCTGCTATGTTGGAGATGAATGTGACTAAAAGGGCCATCTTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR GCA 90 bp TGCTGTGGGCAGGGTGGGAAAGCCGCCACATCTCTACTTCCCAAGAAAGGCCACACACTCTATCCAGACTaGTGTACAGTGCGGCCCAAA +
Preference number: 4 (lower is better)
Translates to: CCGQGGKAATSLLPKKGHTLYPD*CTVRPK
Trigger: TTTGGGCCGCACTGTACAGCAGTCTGGATAGAGTGT...GTGGCCTTTCTTGGGAAGTAGAGATGTGGCGGCTTTCCCACCCTGCCCACAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR GCA 90 bp GCCATAGGGTATCTGGAGAAATGTACACAGGCAGCCTCAGCTGGAGTCATGCGATCAACCGTGATCGCCTaGCAGCTTCCAGCCAGTGCA +
Preference number: 4 (lower is better)
Translates to: AIGYLEKCTQAASAGVMRSTVIA*QLPASA
Trigger: TGCACTGGCTGGAAGCTGGCAGGCGATCACGGTTGA...TCGCATGACTCCAGCTGAGGCTGCCTGTGTACATTTCTCCAGATACCCTATGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650656.1
ENST00000651168.1
CDS-3UTR GCA 90 bp GACAATATGCTTCCTGCTGAGTCCATTTTAAATCACACAACACTAGCCGTGGCAGCCCGCCGAAGGCGTTaGTGCCCTTGGACCGCACCC +
Preference number: 4 (lower is better)
Translates to: DNMLPAESILNHTTLAVAARRRR*CPWTAP
Trigger: GGGTGCGGTCCAAGGGCAGCAACGCCTTCGGCGGGC...TGCCACGGCTAGTGTTGTGTGATTTAAAATGGACTCAGCAGGAAGCATATTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp AAGAGAAAGTTTGAAGGGCTGGAAGGACTTCCAGAGCTGCCCCAGACCAAAGGCGAAGGAGGCAGGCCCTaGCCTGAGGCTTTAGAGATG +
Preference number: 4 (lower is better)
Translates to: KRKFEGLEGLPELPQTKGEGGRP*PEALEM
Trigger: CATCTCTAAAGCCTCAGGCCAGGGCCTGCCTCCTTC...GCCTTTGGTCTGGGGCAGCTCTGGAAGTCCTTCCAGCCCTTCAAACTTTCTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466756.2
CDS-3UTR CCA 90 bp CAAGACAAGGAAGTGAAAGGGACTGCCTATGAGCCCAGGATCTTGCCCTCAGGACATCAGAGCCTGCATTaGGCTCACTCATGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: QDKEVKGTAYEPRILPSGHQSLH*AHSWPG
Trigger: CCCTGGCCATGAGTGAGCCCAATGCAGGCTCTGATG...TCCTGAGGGCAAGATCCTGGGCTCATAGGCAGTCCCTTTCACTTCCTTGTCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp CAAGACAAGGAAGTGAAAGGGACTGCCTATGAGCCCAGGATCTTGCCCTCAGGACGTGCAGGTAGGGAATaGTGTGGTCCAGGACCGCTT +
Preference number: 4 (lower is better)
Translates to: QDKEVKGTAYEPRILPSGRAGRE*CGPGPL
Trigger: AAGCGGTCCTGGACCACACCATTCCCTACCTGCACG...TCCTGAGGGCAAGATCCTGGGCTCATAGGCAGTCCCTTTCACTTCCTTGTCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp GTAGGGCCACCTAAGCTTTGTAAACCCTGCCAAGGAGCTCTGTCCCAAAGACGTCGTGCAGGTAGGGAATaGTGTGGTCCAGGACCGCTT +
Preference number: 4 (lower is better)
Translates to: VGPPKLCKPCQGALSQRRRAGRE*CGPGPL
Trigger: AAGCGGTCCTGGACCACACCATTCCCTACCTGCACG...ACGTCTTTGGGACAGAGCTCCTTGGCAGGGTTTACAAAGCTTAGGTGGCCCTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481262.6
ENST00000491554.6
CDS-3UTR CCA 90 bp GGTATCTGGAGAAATGTACACAGGCAGCCTCAGCTGGAGTCATGCGAGCCAACTCGTGCAGGTAGGGAATaGTGTGGTCCAGGACCGCTT +
Preference number: 4 (lower is better)
Translates to: GIWRNVHRQPQLESCEPTRAGRE*CGPGPL
Trigger: AAGCGGTCCTGGACCACACCATTCCCTACCTGCACG...AGTTGGCTCGCATGACTCCAGCTGAGGCTGCCTGTGTACATTTCTCCAGATACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp CAGGGCTTAGACAGACTGGATGAAGCGCCCCATTTTGCCACATTGTCTCCAGGCAAGTGGCCGATCTTCTaGCCAAAGGCTTCCCTCACG +
Preference number: 4 (lower is better)
Translates to: QGLDRLDEAPHFATLSPGKWPIF*PKASLT
Trigger: CGTGAGGGAAGCCTTTGGCCAGAAGATCGGCCACTT...GCCTGGAGACAATGTGGCAAAATGGGGCGCTTCATCCAGTCTGTCTAAGCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp TGCTGTGGGCAGGGTGGGAAAGCCGCCACATCTCTACTTCCCAAGAAAGGCCACCCTCATCGCAGGCCTTaGCGACATTGTAGACATACT +
Preference number: 4 (lower is better)
Translates to: CCGQGGKAATSLLPKKGHPHRRP*RHCRHT
Trigger: AGTATGTCTACAATGTCGCCAAGGCCTGCGATGAGG...GTGGCCTTTCTTGGGAAGTAGAGATGTGGCGGCTTTCCCACCCTGCCCACAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp CAGGGCTTAGACAGACTGGATGAAGCGCCCCATTTTGCCACATTGTCTCCAGGCTCCTTAGCAGTGCAATaGCCCTCATCGCAGGCCTTG +
Preference number: 4 (lower is better)
Translates to: QGLDRLDEAPHFATLSPGSLAVQ*PSSQAL
Trigger: CAAGGCCTGCGATGAGGGCCATTGCACTGCTAAGGA...GCCTGGAGACAATGTGGCAAAATGGGGCGCTTCATCCAGTCTGTCTAAGCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp ACCCAGACCCATTCCCTTCTCAGATCACACTCTATCCAGACTGCTGTACAGTGCACGGGCAAAAGCGAGTaGGCCCGCTGGGAAACGAAG +
Preference number: 4 (lower is better)
Translates to: TQTHSLLRSHSIQTAVQCTGKSE*ARWETK
Trigger: CTTCGTTTCCCAGCGGGCCCACTCGCTTTTGCCCGT...GCACTGTACAGCAGTCTGGATAGAGTGTGATCTGAGAAGGGAATGGGTCTGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp GGTATCTGGAGAAATGTACACAGGCAGCCTCAGCTGGAGTCATGCGAGCCAACTCCCAAGAGAAAGAGGTaGGTACCTGCATGCCCCCAG +
Preference number: 4 (lower is better)
Translates to: GIWRNVHRQPQLESCEPTPKRKR*VPACPQ
Trigger: CTGGGGGCATGCAGGTACCCACCTCTTTCTCTTGGG...AGTTGGCTCGCATGACTCCAGCTGAGGCTGCCTGTGTACATTTCTCCAGATACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp CCAGACCCATTCCCTTCTCAGATCACACTCTATCCAGACTGCTGTACAGTGCGGCCCAAGAGAAAGAGGTaGGTACCTGCATGCCCCCAG +
Preference number: 4 (lower is better)
Translates to: PDPFPSQITLYPDCCTVRPKRKR*VPACPQ
Trigger: CTGGGGGCATGCAGGTACCCACCTCTTTCTCTTGGG...CCGCACTGTACAGCAGTCTGGATAGAGTGTGATCTGAGAAGGGAATGGGTCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp GGTATCTGGAGAAATGTACACAGGCAGCCTCAGCTGGAGTCATGCGAGCCAACTCAGGCTGGAGTGCAATaGCACAAGCTCGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: GIWRNVHRQPQLESCEPTQAGVQ*HKLGSL
Trigger: CAGTGAGCCGAGCTTGTGCCATTGCACTCCAGCCTG...AGTTGGCTCGCATGACTCCAGCTGAGGCTGCCTGTGTACATTTCTCCAGATACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp CCAGACCCATTCCCTTCTCAGATCACACTCTATCCAGACTGCTGTACAGTGCGGACAGGCAGCCTCAGCTaGAGTCATGCGAGCCAACTC +
Preference number: 4 (lower is better)
Translates to: PDPFPSQITLYPDCCTVRTGSLS*SHASQL
Trigger: GAGTTGGCTCGCATGACTCCAGCTGAGGCTGCCTGT...CCGCACTGTACAGCAGTCTGGATAGAGTGTGATCTGAGAAGGGAATGGGTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp CACACGGCCAGGACTGGATGGTGCCCGTGGCAGGGCGGTGCACAAGGGCTCAGAATATTTAATACAAAATaGCAGCAGCCACTGTGCAGT +
Preference number: 4 (lower is better)
Translates to: HTARTGWCPWQGGAQGLRIFNTK*QQPLCS
Trigger: ACTGCACAGTGGCTGCTGCCATTTTGTATTAAATAT...TCTGAGCCCTTGTGCACCGCCCTGCCACGGGCACCATCCAGTCCTGGCCGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp CAGGGCTTAGACAGACTGGATGAAGCGCCCCATTTTGCCACATTGTCTCCAGGCAGTGCGGCCCAAAGCTaGAATTCTCAGAACACCCCC +
Preference number: 4 (lower is better)
Translates to: QGLDRLDEAPHFATLSPGSAAQS*NSQNTP
Trigger: GGGGGTGTTCTGAGAATTCCAGCTTTGGGCCGCACT...GCCTGGAGACAATGTGGCAAAATGGGGCGCTTCATCCAGTCTGTCTAAGCCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp GCCATAGGGTATCTGGAGAAATGTACACAGGCAGCCTCAGCTGGAGTCATGCGAGCTAGGAACAGCACTTaGCTGCAGGCCAGGACCAAG +
Preference number: 4 (lower is better)
Translates to: AIGYLEKCTQAASAGVMRARNST*LQARTK
Trigger: CTTGGTCCTGGCCTGCAGCCAAGTGCTGTTCCTAGC...TCGCATGACTCCAGCTGAGGCTGCCTGTGTACATTTCTCCAGATACCCTATGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp TGCTGTGGGCAGGGTGGGAAAGCCGCCACATCTCTACTTCCCAAGAAAGGCCACACATTGTCTCCAGGCTaGTCTCTCCAGCCACACATT +
Preference number: 4 (lower is better)
Translates to: CCGQGGKAATSLLPKKGHTLSPG*SLQPHI
Trigger: AATGTGTGGCTGGAGAGACCAGCCTGGAGACAATGT...GTGGCCTTTCTTGGGAAGTAGAGATGTGGCGGCTTTCCCACCCTGCCCACAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp AGGATTTTGAGGAAAGGAAGCTTCTGGTCTGAGATCCAAGAGGCGAGTTGGGGGCTCCCAGGTGGGTGTTaGGCGGAAAAGGTCTGCCAG +
Preference number: 4 (lower is better)
Translates to: RILRKGSFWSEIQEASWGLPGGC*AEKVCQ
Trigger: CTGGCAGACCTTTTCCGCCCAACACCCACCTGGGAG...CCCCCAACTCGCCTCTTGGATCTCAGACCAGAAGCTTCCTTTCCTCAAAATCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000491554.6
CDS-3UTR CCA 90 bp ACCCAGACCCATTCCCTTCTCAGATCACACTCTATCCAGACTGCTGTACAGTGCAAACCGGCTAGGGGGTaGGCTGCAGCAGCCAATCAC +
Preference number: 4 (lower is better)
Translates to: TQTHSLLRSHSIQTAVQCKPARG*AAAANH
Trigger: GTGATTGGCTGCTGCAGCCCACCCCCTAGCCGGTTT...GCACTGTACAGCAGTCTGGATAGAGTGTGATCTGAGAAGGGAATGGGTCTGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000650656.1
ENST00000651168.1
CDS-3UTR TCA 90 bp GAGGCGGGTGTACATGTCAGCCATCTTCCCCTGCATCAACTGGAAGTGGCCGATTGTGGCACACTCAGCTaGGTAAAGAATCACACCTGC +
Preference number: 4 (lower is better)
Translates to: EAGVHVSHLPLHQLEVADCGTLS*VKNHTC
Trigger: GCAGGTGTGATTCTTTACTCAGCTGAGTGTGCCACA...ATCGGCCACTTCCAGTTGATGCAGGGGAAGATGGCTGACATGTACACCCGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481262.6
CDS-3UTR TCA 90 bp GCAGCAGAAGGGGAAGGCCCAGGGGGATCAGAGTCATATTTGCCTTGCCAAGCCAAGCAAGAGAAAGTTTaGAGGGCTGGAAGGACTTCC +
Preference number: 4 (lower is better)
Translates to: AAEGEGPGGSESYLPCQAKQEKV*RAGRTS
Trigger: GGAAGTCCTTCCAGCCCTTCAAACTTTCTCTTGCTT...GGCTTGGCAAGGCAAATATGACTCTGATCCCCCTGGGCCTTCCCCTTCTGCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000466756.2
CDS-3UTR TCA 90 bp CAAGACAAGGAAGTGAAAGGGACTGCCTATGAGCCCAGGATCTTGCCCTCAGGATGCGTACAAGCTGGTTaGTGCAGAGGTTGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: QDKEVKGTAYEPRILPSGCVQAG*CRGWSG
Trigger: CCCACTCCAACCTCTGCATCAACCAGCTTGTACGCA...TCCTGAGGGCAAGATCCTGGGCTCATAGGCAGTCCCTTTCACTTCCTTGTCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR TCA 90 bp GCCATCTTCCCCTGCATCAACTGGAAGTGGCCGATCTTCTGGCCAAAGGCTTCCCGATGTACTCACCACTaGTCAGCTTCGGGAGATACT +
Preference number: 4 (lower is better)
Translates to: AIFPCINWKWPIFWPKASRCTHH*SASGDT
Trigger: AGTATCTCCCGAAGCTGATCAGTGGTGAGTACATCG...GGAAGCCTTTGGCCAGAAGATCGGCCACTTCCAGTTGATGCAGGGGAAGATGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481262.6
CDS-3UTR TCA 90 bp GGGCCACCTAAGCTTTGTAAACCCTGCCAAGGAGCTCTGTCCCAAAGACGTTGGAGGAAGCTTCTGGTCTaGGATCCAAGAGGCGAGTTG +
Preference number: 4 (lower is better)
Translates to: GPPKLCKPCQGALSQRRWRKLLV*DPRGEL
Trigger: CAACTCGCCTCTTGGATCTCAGACCAGAAGCTTCCT...CCAACGTCTTTGGGACAGAGCTCCTTGGCAGGGTTTACAAAGCTTAGGTGGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481262.6
ENST00000491554.6
CDS-3UTR TCA 90 bp AAGCCGAGAGCGGAGCCTGAAGGAGCAGGCACTCTTCGGGCAGGCTGCCATAGGAACATAGAAGGATTTTaGGGAAAGGAAGCTTCTGGT +
Preference number: 4 (lower is better)
Translates to: KPRAEPEGAGTLRAGCHRNIEGF*GKEASG
Trigger: ACCAGAAGCTTCCTTTCCTCAAAATCCTTCTATGTT...CCTATGGCAGCCTGCCCGAAGAGTGCCTGCTCCTTCAGGCTCCGCTCTCGGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491554.6
CDS-3UTR TCA 90 bp CTGTGCTTGAGCAGAGAGATCTCCTTGCCAGAGCCTCACCCAAGAGAAAGAGGTTTGCCACCAAAACACTaGATGCCGTCCAGGGCTACC +
Preference number: 4 (lower is better)
Translates to: LCLSREISLPEPHPRERGLPPKH*MPSRAT
Trigger: GGTAGCCCTGGACGGCATTCAGTGTTTTGGTGGCAA...ACCTCTTTCTCTTGGGTGAGGCTCTGGCAAGGAGATCTCTCTGCTCAAGCACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR TCA 90 bp ACCCAGACCCATTCCCTTCTCAGATCACACTCTATCCAGACTGCTGTACAGTGCCCTTCCTGTCCCTCATaGAAGAACGGGCTGGAGGAC +
Preference number: 4 (lower is better)
Translates to: TQTHSLLRSHSIQTAVQCPSCPS*KNGLED
Trigger: GTCCTCCAGCCCGTTCTTTCATGAGGGACAGGAAGG...GCACTGTACAGCAGTCTGGATAGAGTGTGATCTGAGAAGGGAATGGGTCTGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR TCA 90 bp TGCTGTACAGGAGGAGCCAGTCTTCCAACAGTACACAAAAGCACGCTGTCCTCTGAAAGGGACTGCCTATaGGCCCAGGATCTTGCCCTC +
Preference number: 4 (lower is better)
Translates to: CCTGGASLPTVHKSTLSSERDCL*AQDLAL
Trigger: GAGGGCAAGATCCTGGGCTCATAGGCAGTCCCTTTC...AGAGGACAGCGTGCTTTTGTGTACTGTTGGAAGACTGGCTCCTCCTGTACAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR TCA 90 bp ACCCAGACCCATTCCCTTCTCAGATCACACTCTATCCAGACTGCTGTACAGTGCGAAAGGGACTGCCTATaGGCCCAGGATCTTGCCCTC +
Preference number: 4 (lower is better)
Translates to: TQTHSLLRSHSIQTAVQCERDCL*AQDLAL
Trigger: GAGGGCAAGATCCTGGGCTCATAGGCAGTCCCTTTC...GCACTGTACAGCAGTCTGGATAGAGTGTGATCTGAGAAGGGAATGGGTCTGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR TCA 90 bp CAAGACAAGGAAGTGAAAGGGACTGCCTATGAGCCCAGGATCTTGCCCTCAGGAAACTTAGCCATGGTCTaGCGAAGCTGCCTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: QDKEVKGTAYEPRILPSGNLAMV*RSCLCS
Trigger: GGAGCAGAGGCAGCTTCGTCAGACCATGGCTAAGTT...TCCTGAGGGCAAGATCCTGGGCTCATAGGCAGTCCCTTTCACTTCCTTGTCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000487418.8
ENST00000651168.1
CDS-3UTR GCA 90 bp TGGGAAAGGGAGGCTGAGACCTCTCTCCTAAGGGCTGATTTTACCTTCCTGTCCGTAACTGAGCCCCACTaGTCCGGAAGCTCGGGATAT +
Preference number: 4 (lower is better)
Translates to: WEREAETSLLRADFTFLSVTEPH*SGSSGY
Trigger: ATATCCCGAGCTTCCGGAGCAGTGGGGCTCAGTTAC...GGACAGGAAGGTAAAATCAGCCCTTAGGAGAGAGGTCTCAGCCTCCCTTTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR GCA 90 bp AGTGCAATGGCCCTCATCGCAGGCCTTGGCGACATTGTAGACATACTGCCGACAGACAACATCAGAGCCTaGATTGGGCTCACTCATGGC +
Preference number: 4 (lower is better)
Translates to: SAMALIAGLGDIVDILPTDNIRA*IGLTHG
Trigger: GCCATGAGTGAGCCCAATGCAGGCTCTGATGTTGTC...TGTCGGCAGTATGTCTACAATGTCGCCAAGGCCTGCGATGAGGGCCATTGCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481262.6
CDS-3UTR GCA 90 bp GGGTATCTGGAGAAATGTACACAGGCAGCCTCAGCTGGAGTCATGCGAGCCAACGACAACATCAGAGCCTaGATTGGGCTCACTCATGGC +
Preference number: 4 (lower is better)
Translates to: GYLEKCTQAASAGVMRANDNIRA*IGLTHG
Trigger: GCCATGAGTGAGCCCAATGCAGGCTCTGATGTTGTC...GTTGGCTCGCATGACTCCAGCTGAGGCTGCCTGTGTACATTTCTCCAGATACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR GCA 90 bp GCCATAGGGTATCTGGAGAAATGTACACAGGCAGCCTCAGCTGGAGTCATGCGATCAGCCATCTTCCCCTaGATCAACTGGAAGTGGCCG +
Preference number: 4 (lower is better)
Translates to: AIGYLEKCTQAASAGVMRSAIFP*INWKWP
Trigger: CGGCCACTTCCAGTTGATGCAGGGGAAGATGGCTGA...TCGCATGACTCCAGCTGAGGCTGCCTGTGTACATTTCTCCAGATACCCTATGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR GCA 90 bp GGGTATCTGGAGAAATGTACACAGGCAGCCTCAGCTGGAGTCATGCGAGCCAACCACCAAAACACTGAATaGCGTCCAGGGCTACCTGTG +
Preference number: 4 (lower is better)
Translates to: GYLEKCTQAASAGVMRANHQNTE*RPGLPV
Trigger: CACAGGTAGCCCTGGACGGCATTCAGTGTTTTGGTG...GTTGGCTCGCATGACTCCAGCTGAGGCTGCCTGTGTACATTTCTCCAGATACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR GCA 90 bp AGCAAGATGGCCCTTTTAGTCACATTCATCTCCAACATAGCAGGGAGCAAGACATGGCACAGGCCCGGCTaGGAGGCCCATGATGCTTGG +
Preference number: 4 (lower is better)
Translates to: SKMALLVTFISNIAGSKTWHRPG*EAHDAW
Trigger: CCAAGCATCATGGGCCTCGCAGCCGGGCCTGTGCCA...TGTCTTGCTCCCTGCTATGTTGGAGATGAATGTGACTAAAAGGGCCATCTTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR GCA 90 bp AGCAAGATGGCCCTTTTAGTCACATTCATCTCCAACATAGCAGGGAGCAAGACAAGGGCCTGTGCCTGCTaGCCAGTCAGCTGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: SKMALLVTFISNIAGSKTRACAC*PVSCGW
Trigger: CCACCCACAGCTGACTGGGCAGCAGGCACAGGCCCT...TGTCTTGCTCCCTGCTATGTTGGAGATGAATGTGACTAAAAGGGCCATCTTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR GCA 90 bp TGCTGTGGGCAGGGTGGGAAAGCCGCCACATCTCTACTTCCCAAGAAAGGCCACCAGCGGCAAGTAGATTaGTTCTCCCCAGATAGGTTT +
Preference number: 4 (lower is better)
Translates to: CCGQGGKAATSLLPKKGHQRQVD*FSPDRF
Trigger: AAACCTATCTGGGGAGAAGCAATCTACTTGCCGCTG...GTGGCCTTTCTTGGGAAGTAGAGATGTGGCGGCTTTCCCACCCTGCCCACAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR GCA 90 bp GGTATCTGGAGAAATGTACACAGGCAGCCTCAGCTGGAGTCATGCGAGCCAACTATGAGCCCAGGATCTTaGCCTCAGGATGGGACGGAA +
Preference number: 4 (lower is better)
Translates to: GIWRNVHRQPQLESCEPTMSPGS*PQDGTE
Trigger: TTCCGTCCCATCCTGAGGGCAAGATCCTGGGCTCAT...AGTTGGCTCGCATGACTCCAGCTGAGGCTGCCTGTGTACATTTCTCCAGATACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp CGAGTACCAGTTTCAGCAAAGGTGCAGAGCTGTGGTATAGGGGTGAGGCAGCAGCCAGGGCTACCTGTGTaGCACACTCAGCTGAGTAAA +
Preference number: 4 (lower is better)
Translates to: RVPVSAKVQSCGIGVRQQPGLPV*HTQLSK
Trigger: TTTACTCAGCTGAGTGTGCCACACAGGTAGCCCTGG...CTGCTGCCTCACCCCTATACCACAGCTCTGCACCTTTGCTGAAACTGGTACTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481262.6
ENST00000491554.6
CDS-3UTR CCA 90 bp CTTCCAGAGCTGCCCCAGACCAAAGGCACAGGGATGAGAAACATGGCAGTGAGGGAAAGTTTGAAGGGCTaGAAGGACTTCCAGAGCTGC +
Preference number: 4 (lower is better)
Translates to: LPELPQTKGTGMRNMAVRESLKG*KDFQSC
Trigger: GCAGCTCTGGAAGTCCTTCCAGCCCTTCAAACTTTC...CCTCACTGCCATGTTTCTCATCCCTGTGCCTTTGGTCTGGGGCAGCTCTGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466756.2
CDS-3UTR CCA 90 bp CTGTGCTTGAGCAGAGAGATCTCCTTGCCAGAGCCTCACCCAAGAGAAAGAGGTCATTGGGCTCACTCATaGCCAGGGCTCCGATGTACT +
Preference number: 4 (lower is better)
Translates to: LCLSREISLPEPHPRERGHWAHS*PGLRCT
Trigger: AGTACATCGGAGCCCTGGCCATGAGTGAGCCCAATG...ACCTCTTTCTCTTGGGTGAGGCTCTGGCAAGGAGATCTCTCTGCTCAAGCACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp ACCCAGACCCATTCCCTTCTCAGATCACACTCTATCCAGACTGCTGTACAGTGCCATCAGAGCCTGCATTaGGCTCACTCATGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: TQTHSLLRSHSIQTAVQCHQSLH*AHSWPG
Trigger: CCCTGGCCATGAGTGAGCCCAATGCAGGCTCTGATG...GCACTGTACAGCAGTCTGGATAGAGTGTGATCTGAGAAGGGAATGGGTCTGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp ATTGTAGACATACTGCCGACACGCCATGAGGCGGGTGTACATGTCAGCCATCTTGATGCCCCGAGAAGCTaGCACAGCAGCCAGATCTGT +
Preference number: 4 (lower is better)
Translates to: IVDILPTRHEAGVHVSHLDAPRS*HSSQIC
Trigger: ACAGATCTGGCTGCTGTGCCAGCTTCTCGGGGCATC...AAGATGGCTGACATGTACACCCGCCTCATGGCGTGTCGGCAGTATGTCTACAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481262.6
CDS-3UTR CCA 90 bp GGGTATCTGGAGAAATGTACACAGGCAGCCTCAGCTGGAGTCATGCGAGCCAACCATGGCCCAGGATGTTaGCAGCAGGAATCTTGCAGT +
Preference number: 4 (lower is better)
Translates to: GYLEKCTQAASAGVMRANHGPGC*QQESCS
Trigger: ACTGCAAGATTCCTGCTGCCAACATCCTGGGCCATG...GTTGGCTCGCATGACTCCAGCTGAGGCTGCCTGTGTACATTTCTCCAGATACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp CCAGACCCATTCCCTTCTCAGATCACACTCTATCCAGACTGCTGTACAGTGCGGAAGTGGCCGATCTTCTaGCCAAAGGCTTCCCTCACG +
Preference number: 4 (lower is better)
Translates to: PDPFPSQITLYPDCCTVRKWPIF*PKASLT
Trigger: CGTGAGGGAAGCCTTTGGCCAGAAGATCGGCCACTT...CCGCACTGTACAGCAGTCTGGATAGAGTGTGATCTGAGAAGGGAATGGGTCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp TGGGTAGGGCCACCTAAGCTTTGTAAACCCTGCCAAGGAGCTCTGTCCCAAAGAAAGTGGCCGATCTTCTaGCCAAAGGCTTCCCTCACG +
Preference number: 4 (lower is better)
Translates to: WVGPPKLCKPCQGALSQRKWPIF*PKASLT
Trigger: CGTGAGGGAAGCCTTTGGCCAGAAGATCGGCCACTT...TCTTTGGGACAGAGCTCCTTGGCAGGGTTTACAAAGCTTAGGTGGCCCTACCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481262.6
ENST00000491554.6
CDS-3UTR CCA 90 bp GCCATAGGGTATCTGGAGAAATGTACACAGGCAGCCTCAGCTGGAGTCATGCGAAAGTGGCCGATCTTCTaGCCAAAGGCTTCCCTCACG +
Preference number: 4 (lower is better)
Translates to: AIGYLEKCTQAASAGVMRKWPIF*PKASLT
Trigger: CGTGAGGGAAGCCTTTGGCCAGAAGATCGGCCACTT...TCGCATGACTCCAGCTGAGGCTGCCTGTGTACATTTCTCCAGATACCCTATGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp GAGGCGGGTGTACATGTCAGCCATCTTCCCCTGCATCAACTGGAAGTGGCCGATTGCATCAACTGGAAGTaGCCGATCTTCTGGCCAAAG +
Preference number: 4 (lower is better)
Translates to: EAGVHVSHLPLHQLEVADCINWK*PIFWPK
Trigger: CTTTGGCCAGAAGATCGGCCACTTCCAGTTGATGCA...ATCGGCCACTTCCAGTTGATGCAGGGGAAGATGGCTGACATGTACACCCGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481262.6
CDS-3UTR CCA 90 bp CAGGGCTTAGACAGACTGGATGAAGCGCCCCATTTTGCCACATTGTCTCCAGGCTTCCCCTGCATCAACTaGAAGTGGCCGATCTTCTGG +
Preference number: 4 (lower is better)
Translates to: QGLDRLDEAPHFATLSPGFPCIN*KWPIFW
Trigger: CCAGAAGATCGGCCACTTCCAGTTGATGCAGGGGAA...GCCTGGAGACAATGTGGCAAAATGGGGCGCTTCATCCAGTCTGTCTAAGCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp TTCAGCAAAGGTGCAGAGCTGTGGTATAGGGGTGAGGCAGCAGATGAGGCTGGATTCCCCTGCATCAACTaGAAGTGGCCGATCTTCTGG +
Preference number: 4 (lower is better)
Translates to: FSKGAELWYRGEAADEAGFPCIN*KWPIFW
Trigger: CCAGAAGATCGGCCACTTCCAGTTGATGCAGGGGAA...TCCAGCCTCATCTGCTGCCTCACCCCTATACCACAGCTCTGCACCTTTGCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000481262.6
ENST00000491554.6
CDS-3UTR CCA 90 bp CCGAGTACCAGTTTCAGCAAAGGTGCAGAGCTGTGGTATAGGGGTGAGGCAGCATTCCCCTGCATCAACTaGAAGTGGCCGATCTTCTGG +
Preference number: 4 (lower is better)
Translates to: PSTSFSKGAELWYRGEAAFPCIN*KWPIFW
Trigger: CCAGAAGATCGGCCACTTCCAGTTGATGCAGGGGAA...TGCTGCCTCACCCCTATACCACAGCTCTGCACCTTTGCTGAAACTGGTACTCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000481262.6
ENST00000491554.6
CDS-3UTR CCA 90 bp CGCCGAGTACCAGTTTCAGCAAAGGTGCAGAGCTGTGGTATAGGGGTGAGGCAGCCTCATCGCAGGCCTTaGCGACATTGTAGACATACT +
Preference number: 4 (lower is better)
Translates to: RRVPVSAKVQSCGIGVRQPHRRP*RHCRHT
Trigger: AGTATGTCTACAATGTCGCCAAGGCCTGCGATGAGG...CTGCCTCACCCCTATACCACAGCTCTGCACCTTTGCTGAAACTGGTACTCGGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481262.6
ENST00000491554.6
CDS-3UTR CCA 90 bp CAAGACAAGGAAGTGAAAGGGACTGCCTATGAGCCCAGGATCTTGCCCTCAGGATCCTTAGCAGTGCAATaGCCCTCATCGCAGGCCTTG +
Preference number: 4 (lower is better)
Translates to: QDKEVKGTAYEPRILPSGSLAVQ*PSSQAL
Trigger: CAAGGCCTGCGATGAGGGCCATTGCACTGCTAAGGA...TCCTGAGGGCAAGATCCTGGGCTCATAGGCAGTCCCTTTCACTTCCTTGTCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp CCAGACCCATTCCCTTCTCAGATCACACTCTATCCAGACTGCTGTACAGTGCGGTCCTTAGCAGTGCAATaGCCCTCATCGCAGGCCTTG +
Preference number: 4 (lower is better)
Translates to: PDPFPSQITLYPDCCTVRSLAVQ*PSSQAL
Trigger: CAAGGCCTGCGATGAGGGCCATTGCACTGCTAAGGA...CCGCACTGTACAGCAGTCTGGATAGAGTGTGATCTGAGAAGGGAATGGGTCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp TGGGAAAGGGAGGCTGAGACCTCTCTCCTAAGGGCTGATTTTACCTTCCTGTCCTCCTTAGCAGTGCAATaGCCCTCATCGCAGGCCTTG +
Preference number: 4 (lower is better)
Translates to: WEREAETSLLRADFTFLSSLAVQ*PSSQAL
Trigger: CAAGGCCTGCGATGAGGGCCATTGCACTGCTAAGGA...GGACAGGAAGGTAAAATCAGCCCTTAGGAGAGAGGTCTCAGCCTCCCTTTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp AGGAAGCAGCGGCAAGTAGATTGCTTCTCCCCAGATAGGTTTGTTTCACAATATGCCTACCCTGGGAGGTaGGCACCTGCATGCCCCCAG +
Preference number: 4 (lower is better)
Translates to: RKQRQVDCFSPDRFVSQYAYPGR*APACPQ
Trigger: CTGGGGGCATGCAGGTGCCCACCTCCCAGGGTAGGC...ATATTGTGAAACAAACCTATCTGGGGAGAAGCAATCTACTTGCCGCTGCTTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp CAGGGCTTAGACAGACTGGATGAAGCGCCCCATTTTGCCACATTGTCTCCAGGCTGTTGGTCGTCAGGCTaGTCTCGAACTCCTGACCTT +
Preference number: 4 (lower is better)
Translates to: QGLDRLDEAPHFATLSPGCWSSG*SRTPDL
Trigger: AAGGTCAGGAGTTCGAGACCAGCCTGACGACCAACA...GCCTGGAGACAATGTGGCAAAATGGGGCGCTTCATCCAGTCTGTCTAAGCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp AGGAAGCAGCGGCAAGTAGATTGCTTCTCCCCAGATAGGTTTGTTTCACAATATACGGCCAGGACTGGATaGTGCCCGTGGCAGGGCGGT +
Preference number: 4 (lower is better)
Translates to: RKQRQVDCFSPDRFVSQYTARTG*CPWQGG
Trigger: ACCGCCCTGCCACGGGCACCATCCAGTCCTGGCCGT...ATATTGTGAAACAAACCTATCTGGGGAGAAGCAATCTACTTGCCGCTGCTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp GACAATATGCTTCCTGCTGAGTCCATTTTAAATCACACAACACTAGCCGTGGCAACGGCCAGGACTGGATaGTGCCCGTGGCAGGGCGGT +
Preference number: 4 (lower is better)
Translates to: DNMLPAESILNHTTLAVATARTG*CPWQGG
Trigger: ACCGCCCTGCCACGGGCACCATCCAGTCCTGGCCGT...TGCCACGGCTAGTGTTGTGTGATTTAAAATGGACTCAGCAGGAAGCATATTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp CAGGGCTTAGACAGACTGGATGAAGCGCCCCATTTTGCCACATTGTCTCCAGGCTCCAAGGACACAAGCTaGATCCAGACAGGAAGCAGC +
Preference number: 4 (lower is better)
Translates to: QGLDRLDEAPHFATLSPGSKDTS*IQTGSS
Trigger: GCTGCTTCCTGTCTGGATCCAGCTTGTGTCCTTGGA...GCCTGGAGACAATGTGGCAAAATGGGGCGCTTCATCCAGTCTGTCTAAGCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp CTGTGCTTGAGCAGAGAGATCTCCTTGCCAGAGCCTCACCCAAGAGAAAGAGGTGGAACTCGGAAGGGGTaGAACAACCCAGACCCATTC +
Preference number: 4 (lower is better)
Translates to: LCLSREISLPEPHPRERGGTRKG*NNPDPF
Trigger: GAATGGGTCTGGGTTGTTCCACCCCTTCCGAGTTCC...ACCTCTTTCTCTTGGGTGAGGCTCTGGCAAGGAGATCTCTCTGCTCAAGCACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp TGCTGTACAGGAGGAGCCAGTCTTCCAACAGTACACAAAAGCACGCTGTCCTCTGCTAGGAACAGCACTTaGCTGCAGGCCAGGACCAAG +
Preference number: 4 (lower is better)
Translates to: CCTGGASLPTVHKSTLSSARNST*LQARTK
Trigger: CTTGGTCCTGGCCTGCAGCCAAGTGCTGTTCCTAGC...AGAGGACAGCGTGCTTTTGTGTACTGTTGGAAGACTGGCTCCTCCTGTACAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp GGTATCTGGAGAAATGTACACAGGCAGCCTCAGCTGGAGTCATGCGAGCCAACTATCTTGCCCTCAGGATaGGACGGAACTGGGGTTGGT +
Preference number: 4 (lower is better)
Translates to: GIWRNVHRQPQLESCEPTILPSG*DGTGVG
Trigger: ACCAACCCCAGTTCCGTCCCATCCTGAGGGCAAGAT...AGTTGGCTCGCATGACTCCAGCTGAGGCTGCCTGTGTACATTTCTCCAGATACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp GCCATAGGGTATCTGGAGAAATGTACACAGGCAGCCTCAGCTGGAGTCATGCGAATCTTGCCCTCAGGATaGGACGGAACTGGGGTTGGT +
Preference number: 4 (lower is better)
Translates to: AIGYLEKCTQAASAGVMRILPSG*DGTGVG
Trigger: ACCAACCCCAGTTCCGTCCCATCCTGAGGGCAAGAT...TCGCATGACTCCAGCTGAGGCTGCCTGTGTACATTTCTCCAGATACCCTATGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp CTGTGCTTGAGCAGAGAGATCTCCTTGCCAGAGCCTCACCCAAGAGAAAGAGGTATCTTGCCCTCAGGATaGGACGGAACTGGGGTTGGT +
Preference number: 4 (lower is better)
Translates to: LCLSREISLPEPHPRERGILPSG*DGTGVG
Trigger: ACCAACCCCAGTTCCGTCCCATCCTGAGGGCAAGAT...ACCTCTTTCTCTTGGGTGAGGCTCTGGCAAGGAGATCTCTCTGCTCAAGCACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR CAA 72 bp GCCATGATTCTGCTGTGCTTGAGCAGAGAGATCTCCTaGCCAGAGCCTCACCCAAGAGAAAGAGGTGGGTAC +
Preference number: 4 (lower is better)
Translates to: AMILLCLSREIS*PEPHPRERGGY
Trigger: GTACCCACCTCTTTCTCTTGGGTGAGGCTCTGGCAAGGAGATCTCTCTGCTCAAGCACAGCAGAATCATGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR CAA 72 bp TCCAATTCATGGAGAGGGGCCATGATTCTGCTGTGCTaGAGCAGAGAGATCTCCTTGCCAGAGCCTCACCCA +
Preference number: 4 (lower is better)
Translates to: SNSWRGAMILLC*SREISLPEPHP
Trigger: TGGGTGAGGCTCTGGCAAGGAGATCTCTCTGCTCAAGCACAGCAGAATCATGGCCCCTCTCCATGAATTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR TCA 90 bp GATGAGAAACATGGCAGTGAGGACTCCTTGCAACAAGAACACGAACATTCAGCAGAAGAGAGGTCTTCCTaGAGGAGGCAGGCCCTGGCC +
Preference number: 4 (lower is better)
Translates to: DEKHGSEDSLQQEHEHSAEERSS*RRQALA
Trigger: GGCCAGGGCCTGCCTCCTTCAGGAAGACCTCTCTTC...TGCTGAATGTTCGTGTTCTTGTTGCAAGGAGTCCTCACTGCCATGTTTCTCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466756.2
CDS-3UTR TCA 90 bp TGCTGTACAGGAGGAGCCAGTCTTCCAACAGTACACAAAAGCACGCTGTCCTCTTGCGTACAAGCTGGTTaGTGCAGAGGTTGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: CCTGGASLPTVHKSTLSSCVQAG*CRGWSG
Trigger: CCCACTCCAACCTCTGCATCAACCAGCTTGTACGCA...AGAGGACAGCGTGCTTTTGTGTACTGTTGGAAGACTGGCTCCTCCTGTACAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR TCA 90 bp AGCAAGATGGCCCTTTTAGTCACATTCATCTCCAACATAGCAGGGAGCAAGACACGGCTGCGAGGCCCATaGTGCTTGGGAGCTGTTGTG +
Preference number: 4 (lower is better)
Translates to: SKMALLVTFISNIAGSKTRLRGP*CLGAVV
Trigger: CACAACAGCTCCCAAGCATCATGGGCCTCGCAGCCG...TGTCTTGCTCCCTGCTATGTTGGAGATGAATGTGACTAAAAGGGCCATCTTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR TCA 90 bp CAAGACAAGGAAGTGAAAGGGACTGCCTATGAGCCCAGGATCTTGCCCTCAGGACTTAGACAGACTGGATaGAGCGCCCCATTTTGCCAC +
Preference number: 4 (lower is better)
Translates to: QDKEVKGTAYEPRILPSGLRQTG*SAPFCH
Trigger: GTGGCAAAATGGGGCGCTTCATCCAGTCTGTCTAAG...TCCTGAGGGCAAGATCCTGGGCTCATAGGCAGTCCCTTTCACTTCCTTGTCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR TCA 90 bp CTGTGCTTGAGCAGAGAGATCTCCTTGCCAGAGCCTCACCCAAGAGAAAGAGGTCTTAGACAGACTGGATaGAGCGCCCCATTTTGCCAC +
Preference number: 4 (lower is better)
Translates to: LCLSREISLPEPHPRERGLRQTG*SAPFCH
Trigger: GTGGCAAAATGGGGCGCTTCATCCAGTCTGTCTAAG...ACCTCTTTCTCTTGGGTGAGGCTCTGGCAAGGAGATCTCTCTGCTCAAGCACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR TCA 90 bp TGCTGTACAGGAGGAGCCAGTCTTCCAACAGTACACAAAAGCACGCTGTCCTCTAACTTAGCCATGGTCTaGCGAAGCTGCCTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: CCTGGASLPTVHKSTLSSNLAMV*RSCLCS
Trigger: GGAGCAGAGGCAGCTTCGTCAGACCATGGCTAAGTT...AGAGGACAGCGTGCTTTTGTGTACTGTTGGAAGACTGGCTCCTCCTGTACAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487418.8
ENST00000651168.1
CDS-3UTR GCA 90 bp GCAGCAGAAGGGGAAGGCCCAGGGGGATCAGAGTCATATTTGCCTTGCCAAGCCGCAGTGAGGACTCCTTaGAACAAGAACACGAACATT +
Preference number: 4 (lower is better)
Translates to: AAEGEGPGGSESYLPCQAAVRTP*NKNTNI
Trigger: AATGTTCGTGTTCTTGTTGCAAGGAGTCCTCACTGC...GGCTTGGCAAGGCAAATATGACTCTGATCCCCCTGGGCCTTCCCCTTCTGCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000466756.2
CDS-3UTR GCA 90 bp TGGGAAAGGGAGGCTGAGACCTCTCTCCTAAGGGCTGATTTTACCTTCCTGTCCGACAACATCAGAGCCTaGATTGGGCTCACTCATGGC +
Preference number: 4 (lower is better)
Translates to: WEREAETSLLRADFTFLSDNIRA*IGLTHG
Trigger: GCCATGAGTGAGCCCAATGCAGGCTCTGATGTTGTC...GGACAGGAAGGTAAAATCAGCCCTTAGGAGAGAGGTCTCAGCCTCCCTTTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR GCA 90 bp CAAGACAAGGAAGTGAAAGGGACTGCCTATGAGCCCAGGATCTTGCCCTCAGGAGACAACATCAGAGCCTaGATTGGGCTCACTCATGGC +
Preference number: 4 (lower is better)
Translates to: QDKEVKGTAYEPRILPSGDNIRA*IGLTHG
Trigger: GCCATGAGTGAGCCCAATGCAGGCTCTGATGTTGTC...TCCTGAGGGCAAGATCCTGGGCTCATAGGCAGTCCCTTTCACTTCCTTGTCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR GCA 90 bp AGCAAGATGGCCCTTTTAGTCACATTCATCTCCAACATAGCAGGGAGCAAGACATGGTCCAGGACCGCTTaGATGAGCCCAAGAGGCCCC +
Preference number: 4 (lower is better)
Translates to: SKMALLVTFISNIAGSKTWSRTA*MSPRGP
Trigger: GGGGCCTCTTGGGCTCATGCAAGCGGTCCTGGACCA...TGTCTTGCTCCCTGCTATGTTGGAGATGAATGTGACTAAAAGGGCCATCTTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR GCA 90 bp ACCCAGACCCATTCCCTTCTCAGATCACACTCTATCCAGACTGCTGTACAGTGCTCAGCCATCTTCCCCTaGATCAACTGGAAGTGGCCG +
Preference number: 4 (lower is better)
Translates to: TQTHSLLRSHSIQTAVQCSAIFP*INWKWP
Trigger: CGGCCACTTCCAGTTGATGCAGGGGAAGATGGCTGA...GCACTGTACAGCAGTCTGGATAGAGTGTGATCTGAGAAGGGAATGGGTCTGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR GCA 90 bp GGTATCTGGAGAAATGTACACAGGCAGCCTCAGCTGGAGTCATGCGAGCCAACTCACCAAAACACTGAATaGCGTCCAGGGCTACCTGTG +
Preference number: 4 (lower is better)
Translates to: GIWRNVHRQPQLESCEPTHQNTE*RPGLPV
Trigger: CACAGGTAGCCCTGGACGGCATTCAGTGTTTTGGTG...AGTTGGCTCGCATGACTCCAGCTGAGGCTGCCTGTGTACATTTCTCCAGATACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR GCA 90 bp TGCTGTACAGGAGGAGCCAGTCTTCCAACAGTACACAAAAGCACGCTGTCCTCTAGAAAGGCCACTAGGTaGAGGAAAAGGGGGCGAAGG +
Preference number: 4 (lower is better)
Translates to: CCTGGASLPTVHKSTLSSRKATR*RKRGRR
Trigger: CCTTCGCCCCCTTTTCCTGCACCTAGTGGCCTTTCT...AGAGGACAGCGTGCTTTTGTGTACTGTTGGAAGACTGGCTCCTCCTGTACAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR GCA 90 bp GGGTATCTGGAGAAATGTACACAGGCAGCCTCAGCTGGAGTCATGCGAGCCAACGCCATGATTCTGCTGTaGTTGAGCAGAGAGATCTCC +
Preference number: 4 (lower is better)
Translates to: GYLEKCTQAASAGVMRANAMILL*LSREIS
Trigger: GGAGATCTCTCTGCTCAAGCACAGCAGAATCATGGC...GTTGGCTCGCATGACTCCAGCTGAGGCTGCCTGTGTACATTTCTCCAGATACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR GCA 90 bp CTGTGCTTGAGCAGAGAGATCTCCTTGCCAGAGCCTCACCCAAGAGAAAGAGGTAGGCACACACCACCTTaGCTGGCCAAGCAAGCATAT +
Preference number: 4 (lower is better)
Translates to: LCLSREISLPEPHPRERGRHTPP*LAKQAY
Trigger: ATATGCTTGCTTGGCCAGGCAAGGTGGTGTGTGCCT...ACCTCTTTCTCTTGGGTGAGGCTCTGGCAAGGAGATCTCTCTGCTCAAGCACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR GCA 90 bp TGGGAAAGGGAGGCTGAGACCTCTCTCCTAAGGGCTGATTTTACCTTCCTGTCCAGGCACACACCACCTTaGCTGGCCAAGCAAGCATAT +
Preference number: 4 (lower is better)
Translates to: WEREAETSLLRADFTFLSRHTPP*LAKQAY
Trigger: ATATGCTTGCTTGGCCAGGCAAGGTGGTGTGTGCCT...GGACAGGAAGGTAAAATCAGCCCTTAGGAGAGAGGTCTCAGCCTCCCTTTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR GCA 90 bp TGCTGTACAGGAGGAGCCAGTCTTCCAACAGTACACAAAAGCACGCTGTCCTCTAGCTCCTGCAACCTCTaGCTCCTGCGTTCAAGCGAT +
Preference number: 4 (lower is better)
Translates to: CCTGGASLPTVHKSTLSSSSCNL*LLRSSD
Trigger: ATCGCTTGAACGCAGGAGGCAGAGGTTGCAGGAGCT...AGAGGACAGCGTGCTTTTGTGTACTGTTGGAAGACTGGCTCCTCCTGTACAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR GCA 90 bp GGTATCTGGAGAAATGTACACAGGCAGCCTCAGCTGGAGTCATGCGAGCCAACTCAGACTGCTGTACAGTaGGGCCCAAAGCTGGAATTC +
Preference number: 4 (lower is better)
Translates to: GIWRNVHRQPQLESCEPTQTAVQ*GPKLEF
Trigger: GAATTCCAGCTTTGGGCCGCACTGTACAGCAGTCTG...AGTTGGCTCGCATGACTCCAGCTGAGGCTGCCTGTGTACATTTCTCCAGATACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR GCA 90 bp ACCCAGACCCATTCCCTTCTCAGATCACACTCTATCCAGACTGCTGTACAGTGCCCCAGGTTCCCCAGCTaGTTCCAAAATTCTCGCAGG +
Preference number: 4 (lower is better)
Translates to: TQTHSLLRSHSIQTAVQCPRFPS*FQNSRR
Trigger: CCTGCGAGAATTTTGGAAGCAGCTGGGGAACCTGGG...GCACTGTACAGCAGTCTGGATAGAGTGTGATCTGAGAAGGGAATGGGTCTGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000487418.8
ENST00000651168.1
CDS-3UTR GCA 90 bp GACAATATGCTTCCTGCTGAGTCCATTTTAAATCACACAACACTAGCCGTGGCACCAGCTTCCAGCCAGTaGAACGGCCGCAGGCCGAGT +
Preference number: 4 (lower is better)
Translates to: DNMLPAESILNHTTLAVAPASSQ*NGRRPS
Trigger: ACTCGGCCTGCGGCCGTTGCACTGGCTGGAAGCTGG...TGCCACGGCTAGTGTTGTGTGATTTAAAATGGACTCAGCAGGAAGCATATTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp CAAGACAAGGAAGTGAAAGGGACTGCCTATGAGCCCAGGATCTTGCCCTCAGGACCAGGGCTACCTGTGTaGCACACTCAGCTGAGTAAA +
Preference number: 4 (lower is better)
Translates to: QDKEVKGTAYEPRILPSGPGLPV*HTQLSK
Trigger: TTTACTCAGCTGAGTGTGCCACACAGGTAGCCCTGG...TCCTGAGGGCAAGATCCTGGGCTCATAGGCAGTCCCTTTCACTTCCTTGTCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp GCAGCAGAAGGGGAAGGCCCAGGGGGATCAGAGTCATATTTGCCTTGCCAAGCCAGATCTTACAGGTGCTaGGAGCCACTGAAGAATTTG +
Preference number: 4 (lower is better)
Translates to: AAEGEGPGGSESYLPCQARSYRC*EPLKNL
Trigger: CAAATTCTTCAGTGGCTCCCAGCACCTGTAAGATCT...GGCTTGGCAAGGCAAATATGACTCTGATCCCCCTGGGCCTTCCCCTTCTGCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000466756.2
CDS-3UTR CCA 90 bp TGCTGTACAGGAGGAGCCAGTCTTCCAACAGTACACAAAAGCACGCTGTCCTCTCATTGGGCTCACTCATaGCCAGGGCTCCGATGTACT +
Preference number: 4 (lower is better)
Translates to: CCTGGASLPTVHKSTLSSHWAHS*PGLRCT
Trigger: AGTACATCGGAGCCCTGGCCATGAGTGAGCCCAATG...AGAGGACAGCGTGCTTTTGTGTACTGTTGGAAGACTGGCTCCTCCTGTACAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp GCCATAGGGTATCTGGAGAAATGTACACAGGCAGCCTCAGCTGGAGTCATGCGACATGGCCCAGGATGTTaGCAGCAGGAATCTTGCAGT +
Preference number: 4 (lower is better)
Translates to: AIGYLEKCTQAASAGVMRHGPGC*QQESCS
Trigger: ACTGCAAGATTCCTGCTGCCAACATCCTGGGCCATG...TCGCATGACTCCAGCTGAGGCTGCCTGTGTACATTTCTCCAGATACCCTATGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp GGTATCTGGAGAAATGTACACAGGCAGCCTCAGCTGGAGTCATGCGAGCCAACTCATGGCCCAGGATGTTaGCAGCAGGAATCTTGCAGT +
Preference number: 4 (lower is better)
Translates to: GIWRNVHRQPQLESCEPTHGPGC*QQESCS
Trigger: ACTGCAAGATTCCTGCTGCCAACATCCTGGGCCATG...AGTTGGCTCGCATGACTCCAGCTGAGGCTGCCTGTGTACATTTCTCCAGATACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp CAGGGCTTAGACAGACTGGATGAAGCGCCCCATTTTGCCACATTGTCTCCAGGCTGCATCAACTGGAAGTaGCCGATCTTCTGGCCAAAG +
Preference number: 4 (lower is better)
Translates to: QGLDRLDEAPHFATLSPGCINWK*PIFWPK
Trigger: CTTTGGCCAGAAGATCGGCCACTTCCAGTTGATGCA...GCCTGGAGACAATGTGGCAAAATGGGGCGCTTCATCCAGTCTGTCTAAGCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp GGTATCTGGAGAAATGTACACAGGCAGCCTCAGCTGGAGTCATGCGAGCCAACTTTCCCCTGCATCAACTaGAAGTGGCCGATCTTCTGG +
Preference number: 4 (lower is better)
Translates to: GIWRNVHRQPQLESCEPTFPCIN*KWPIFW
Trigger: CCAGAAGATCGGCCACTTCCAGTTGATGCAGGGGAA...AGTTGGCTCGCATGACTCCAGCTGAGGCTGCCTGTGTACATTTCTCCAGATACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp AGTGCAATGGCCCTCATCGCAGGCCTTGGCGACATTGTAGACATACTGCCGACACCTCATCGCAGGCCTTaGCGACATTGTAGACATACT +
Preference number: 4 (lower is better)
Translates to: SAMALIAGLGDIVDILPTPHRRP*RHCRHT
Trigger: AGTATGTCTACAATGTCGCCAAGGCCTGCGATGAGG...TGTCGGCAGTATGTCTACAATGTCGCCAAGGCCTGCGATGAGGGCCATTGCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481262.6
CDS-3UTR CCA 90 bp GGGCCACCTAAGCTTTGTAAACCCTGCCAAGGAGCTCTGTCCCAAAGACGTTGGAGGAAAGGAAGCTTCTaGTCTGAGATCCAAGAGGCG +
Preference number: 4 (lower is better)
Translates to: GPPKLCKPCQGALSQRRWRKGSF*SEIQEA
Trigger: CGCCTCTTGGATCTCAGACCAGAAGCTTCCTTTCCT...CCAACGTCTTTGGGACAGAGCTCCTTGGCAGGGTTTACAAAGCTTAGGTGGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481262.6
ENST00000491554.6
CDS-3UTR CCA 90 bp TGGGAAAGGGAGGCTGAGACCTCTCTCCTAAGGGCTGATTTTACCTTCCTGTCCGCAACGTCCGCCTCCTaGGTTCAAGTAATTCTCCTG +
Preference number: 4 (lower is better)
Translates to: WEREAETSLLRADFTFLSATSAS*VQVILL
Trigger: CAGGAGAATTACTTGAACCCAGGAGGCGGACGTTGC...GGACAGGAAGGTAAAATCAGCCCTTAGGAGAGAGGTCTCAGCCTCCCTTTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp GCCATAGGGTATCTGGAGAAATGTACACAGGCAGCCTCAGCTGGAGTCATGCGAGCAACGTCCGCCTCCTaGGTTCAAGTAATTCTCCTG +
Preference number: 4 (lower is better)
Translates to: AIGYLEKCTQAASAGVMRATSAS*VQVILL
Trigger: CAGGAGAATTACTTGAACCCAGGAGGCGGACGTTGC...TCGCATGACTCCAGCTGAGGCTGCCTGTGTACATTTCTCCAGATACCCTATGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp GGTATCTGGAGAAATGTACACAGGCAGCCTCAGCTGGAGTCATGCGAGCCAACTAGCCTCCTGAGTAGCTaGGATTACAGACGTGCACCA +
Preference number: 4 (lower is better)
Translates to: GIWRNVHRQPQLESCEPTSLLSS*DYRRAP
Trigger: TGGTGCACGTCTGTAATCCCAGCTACTCAGGAGGCT...AGTTGGCTCGCATGACTCCAGCTGAGGCTGCCTGTGTACATTTCTCCAGATACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp GACAATATGCTTCCTGCTGAGTCCATTTTAAATCACACAACACTAGCCGTGGCAACTGGATGGTGCCCGTaGCAGGGCGGTGCACAAGGG +
Preference number: 4 (lower is better)
Translates to: DNMLPAESILNHTTLAVATGWCP*QGGAQG
Trigger: CCCTTGTGCACCGCCCTGCCACGGGCACCATCCAGT...TGCCACGGCTAGTGTTGTGTGATTTAAAATGGACTCAGCAGGAAGCATATTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp GGTATCTGGAGAAATGTACACAGGCAGCCTCAGCTGGAGTCATGCGAGCCAACTTCCAAGGACACAAGCTaGATCCAGACAGGAAGCAGC +
Preference number: 4 (lower is better)
Translates to: GIWRNVHRQPQLESCEPTSKDTS*IQTGSS
Trigger: GCTGCTTCCTGTCTGGATCCAGCTTGTGTCCTTGGA...AGTTGGCTCGCATGACTCCAGCTGAGGCTGCCTGTGTACATTTCTCCAGATACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp ACCCAGACCCATTCCCTTCTCAGATCACACTCTATCCAGACTGCTGTACAGTGCGGAACTCGGAAGGGGTaGAACAACCCAGACCCATTC +
Preference number: 4 (lower is better)
Translates to: TQTHSLLRSHSIQTAVQCGTRKG*NNPDPF
Trigger: GAATGGGTCTGGGTTGTTCCACCCCTTCCGAGTTCC...GCACTGTACAGCAGTCTGGATAGAGTGTGATCTGAGAAGGGAATGGGTCTGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp GGGTATCTGGAGAAATGTACACAGGCAGCCTCAGCTGGAGTCATGCGAGCCAACCAGGATAGGTGCTGCTaGGCTGAGAACCAAGAAAAC +
Preference number: 4 (lower is better)
Translates to: GYLEKCTQAASAGVMRANQDRCC*AENQEN
Trigger: GTTTTCTTGGTTCTCAGCCCAGCAGCACCTATCCTG...GTTGGCTCGCATGACTCCAGCTGAGGCTGCCTGTGTACATTTCTCCAGATACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp AGGAAGCAGCGGCAAGTAGATTGCTTCTCCCCAGATAGGTTTGTTTCACAATATCTGCGATCGATCTCCTaGGCCTTGGGGGCCAGGTGC +
Preference number: 4 (lower is better)
Translates to: RKQRQVDCFSPDRFVSQYLRSIS*ALGARC
Trigger: GCACCTGGCCCCCAAGGCCCAGGAGATCGATCGCAG...ATATTGTGAAACAAACCTATCTGGGGAGAAGCAATCTACTTGCCGCTGCTTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000487418.8
ENST00000651168.1
CDS-3UTR CCA 90 bp GACAATATGCTTCCTGCTGAGTCCATTTTAAATCACACAACACTAGCCGTGGCACTGCGATCGATCTCCTaGGCCTTGGGGGCCAGGTGC +
Preference number: 4 (lower is better)
Translates to: DNMLPAESILNHTTLAVALRSIS*ALGARC
Trigger: GCACCTGGCCCCCAAGGCCCAGGAGATCGATCGCAG...TGCCACGGCTAGTGTTGTGTGATTTAAAATGGACTCAGCAGGAAGCATATTGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000487418.8
ENST00000651168.1
CDS-3UTR TCA 90 bp GCCATAGGGTATCTGGAGAAATGTACACAGGCAGCCTCAGCTGGAGTCATGCGATGTGGCACACTCAGCTaGGTAAAGAATCACACCTGC +
Preference number: 4 (lower is better)
Translates to: AIGYLEKCTQAASAGVMRCGTLS*VKNHTC
Trigger: GCAGGTGTGATTCTTTACTCAGCTGAGTGTGCCACA...TCGCATGACTCCAGCTGAGGCTGCCTGTGTACATTTCTCCAGATACCCTATGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR TCA 90 bp CCAGACCCATTCCCTTCTCAGATCACACTCTATCCAGACTGCTGTACAGTGCGGTGTGGCACACTCAGCTaGGTAAAGAATCACACCTGC +
Preference number: 4 (lower is better)
Translates to: PDPFPSQITLYPDCCTVRCGTLS*VKNHTC
Trigger: GCAGGTGTGATTCTTTACTCAGCTGAGTGTGCCACA...CCGCACTGTACAGCAGTCTGGATAGAGTGTGATCTGAGAAGGGAATGGGTCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR TCA 90 bp GCCATAGGGTATCTGGAGAAATGTACACAGGCAGCCTCAGCTGGAGTCATGCGACGATGTACTCACCACTaGTCAGCTTCGGGAGATACT +
Preference number: 4 (lower is better)
Translates to: AIGYLEKCTQAASAGVMRRCTHH*SASGDT
Trigger: AGTATCTCCCGAAGCTGATCAGTGGTGAGTACATCG...TCGCATGACTCCAGCTGAGGCTGCCTGTGTACATTTCTCCAGATACCCTATGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR TCA 90 bp GGTATCTGGAGAAATGTACACAGGCAGCCTCAGCTGGAGTCATGCGAGCCAACTCGATGTACTCACCACTaGTCAGCTTCGGGAGATACT +
Preference number: 4 (lower is better)
Translates to: GIWRNVHRQPQLESCEPTRCTHH*SASGDT
Trigger: AGTATCTCCCGAAGCTGATCAGTGGTGAGTACATCG...AGTTGGCTCGCATGACTCCAGCTGAGGCTGCCTGTGTACATTTCTCCAGATACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR TCA 90 bp ATTGTAGACATACTGCCGACACGCCATGAGGCGGGTGTACATGTCAGCCATCTTAGGAAGCTTCTGGTCTaGGATCCAAGAGGCGAGTTG +
Preference number: 4 (lower is better)
Translates to: IVDILPTRHEAGVHVSHLRKLLV*DPRGEL
Trigger: CAACTCGCCTCTTGGATCTCAGACCAGAAGCTTCCT...AAGATGGCTGACATGTACACCCGCCTCATGGCGTGTCGGCAGTATGTCTACAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481262.6
CDS-3UTR TCA 90 bp GACAATATGCTTCCTGCTGAGTCCATTTTAAATCACACAACACTAGCCGTGGCACGGCTGCGAGGCCCATaGTGCTTGGGAGCTGTTGTG +
Preference number: 4 (lower is better)
Translates to: DNMLPAESILNHTTLAVARLRGP*CLGAVV
Trigger: CACAACAGCTCCCAAGCATCATGGGCCTCGCAGCCG...TGCCACGGCTAGTGTTGTGTGATTTAAAATGGACTCAGCAGGAAGCATATTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR TCA 90 bp GGTATCTGGAGAAATGTACACAGGCAGCCTCAGCTGGAGTCATGCGAGCCAACTAGCAAGACAAGGAAGTaGAAGGGACTGCCTATGAGC +
Preference number: 4 (lower is better)
Translates to: GIWRNVHRQPQLESCEPTSKTRK*KGLPMS
Trigger: GCTCATAGGCAGTCCCTTTCACTTCCTTGTCTTGCT...AGTTGGCTCGCATGACTCCAGCTGAGGCTGCCTGTGTACATTTCTCCAGATACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR TCA 90 bp CAAGACAAGGAAGTGAAAGGGACTGCCTATGAGCCCAGGATCTTGCCCTCAGGAAGCAAGACAAGGAAGTaGAAGGGACTGCCTATGAGC +
Preference number: 4 (lower is better)
Translates to: QDKEVKGTAYEPRILPSGSKTRK*KGLPMS
Trigger: GCTCATAGGCAGTCCCTTTCACTTCCTTGTCTTGCT...TCCTGAGGGCAAGATCCTGGGCTCATAGGCAGTCCCTTTCACTTCCTTGTCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR GCA 90 bp GCGCCGAGTACCAGTTTCAGCAAAGGTGCAGAGCTGTGGTATAGGGGTGAGGCAGTAAAGAATCACACCTaGACAGTCCTTAGCAGTGCA +
Preference number: 4 (lower is better)
Translates to: APSTSFSKGAELWYRGEAVKNHT*TVLSSA
Trigger: TGCACTGCTAAGGACTGTGCAGGTGTGATTCTTTAC...TGCCTCACCCCTATACCACAGCTCTGCACCTTTGCTGAAACTGGTACTCGGCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481262.6
ENST00000491554.6
CDS-3UTR GCA 90 bp TGCTGTACAGGAGGAGCCAGTCTTCCAACAGTACACAAAAGCACGCTGTCCTCTGACAACATCAGAGCCTaGATTGGGCTCACTCATGGC +
Preference number: 4 (lower is better)
Translates to: CCTGGASLPTVHKSTLSSDNIRA*IGLTHG
Trigger: GCCATGAGTGAGCCCAATGCAGGCTCTGATGTTGTC...AGAGGACAGCGTGCTTTTGTGTACTGTTGGAAGACTGGCTCCTCCTGTACAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR GCA 90 bp GACAATATGCTTCCTGCTGAGTCCATTTTAAATCACACAACACTAGCCGTGGCATGGTCCAGGACCGCTTaGATGAGCCCAAGAGGCCCC +
Preference number: 4 (lower is better)
Translates to: DNMLPAESILNHTTLAVAWSRTA*MSPRGP
Trigger: GGGGCCTCTTGGGCTCATGCAAGCGGTCCTGGACCA...TGCCACGGCTAGTGTTGTGTGATTTAAAATGGACTCAGCAGGAAGCATATTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR GCA 90 bp AGGAAGCAGCGGCAAGTAGATTGCTTCTCCCCAGATAGGTTTGTTTCACAATATTGGTCCAGGACCGCTTaGATGAGCCCAAGAGGCCCC +
Preference number: 4 (lower is better)
Translates to: RKQRQVDCFSPDRFVSQYWSRTA*MSPRGP
Trigger: GGGGCCTCTTGGGCTCATGCAAGCGGTCCTGGACCA...ATATTGTGAAACAAACCTATCTGGGGAGAAGCAATCTACTTGCCGCTGCTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR GCA 90 bp CAGGGCTTAGACAGACTGGATGAAGCGCCCCATTTTGCCACATTGTCTCCAGGCGGACTAGTGAAAGTCTaGATTGAAGGCTCTGCCGAT +
Preference number: 4 (lower is better)
Translates to: QGLDRLDEAPHFATLSPGGLVKV*IEGSAD
Trigger: ATCGGCAGAGCCTTCAATGCAGACTTTCACTAGTCC...GCCTGGAGACAATGTGGCAAAATGGGGCGCTTCATCCAGTCTGTCTAAGCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR GCA 90 bp CTGTGCTTGAGCAGAGAGATCTCCTTGCCAGAGCCTCACCCAAGAGAAAGAGGTGCCATGATTCTGCTGTaGTTGAGCAGAGAGATCTCC +
Preference number: 4 (lower is better)
Translates to: LCLSREISLPEPHPRERGAMILL*LSREIS
Trigger: GGAGATCTCTCTGCTCAAGCACAGCAGAATCATGGC...ACCTCTTTCTCTTGGGTGAGGCTCTGGCAAGGAGATCTCTCTGCTCAAGCACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR GCA 90 bp AGCAAGATGGCCCTTTTAGTCACATTCATCTCCAACATAGCAGGGAGCAAGACATCGCCCAGGCTGGAGTaGAATGGCACAAGCTCGGCT +
Preference number: 4 (lower is better)
Translates to: SKMALLVTFISNIAGSKTSPRLE*NGTSSA
Trigger: AGCCGAGCTTGTGCCATTGCACTCCAGCCTGGGCGA...TGTCTTGCTCCCTGCTATGTTGGAGATGAATGTGACTAAAAGGGCCATCTTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR GCA 90 bp CAACAATCCCCAGACAATATGCTTCCTGCTGAGTCCATTTTAAATCACACAACAGCCAGGACTGGATGGTaGCCGTGGCAGGGCGGTGCA +
Preference number: 4 (lower is better)
Translates to: QQSPDNMLPAESILNHTTARTGW*PWQGGA
Trigger: TGCACCGCCCTGCCACGGGCACCATCCAGTCCTGGC...TGTTGTGTGATTTAAAATGGACTCAGCAGGAAGCATATTGTCTGGGGATTGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR GCA 90 bp TGCTGTACAGGAGGAGCCAGTCTTCCAACAGTACACAAAAGCACGCTGTCCTCTCAGACTGCTGTACAGTaGGGCCCAAAGCTGGAATTC +
Preference number: 4 (lower is better)
Translates to: CCTGGASLPTVHKSTLSSQTAVQ*GPKLEF
Trigger: GAATTCCAGCTTTGGGCCGCACTGTACAGCAGTCTG...AGAGGACAGCGTGCTTTTGTGTACTGTTGGAAGACTGGCTCCTCCTGTACAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR GCA 90 bp CTGTGCTTGAGCAGAGAGATCTCCTTGCCAGAGCCTCACCCAAGAGAAAGAGGTACACTCTATCCAGACTaGTGTACAGTGCGGCCCAAA +
Preference number: 4 (lower is better)
Translates to: LCLSREISLPEPHPRERGTLYPD*CTVRPK
Trigger: TTTGGGCCGCACTGTACAGCAGTCTGGATAGAGTGT...ACCTCTTTCTCTTGGGTGAGGCTCTGGCAAGGAGATCTCTCTGCTCAAGCACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR GCA 90 bp TGCTGTGGGCAGGGTGGGAAAGCCGCCACATCTCTACTTCCCAAGAAAGGCCACTTCTTTTTATCTCCCTaGGTTGAAATAGCAGCCCCT +
Preference number: 4 (lower is better)
Translates to: CCGQGGKAATSLLPKKGHFFLSP*VEIAAP
Trigger: AGGGGCTGCTATTTCAACGCAGGGAGATAAAAAGAA...GTGGCCTTTCTTGGGAAGTAGAGATGTGGCGGCTTTCCCACCCTGCCCACAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp ACCCAGACCCATTCCCTTCTCAGATCACACTCTATCCAGACTGCTGTACAGTGCCCAGGGCTACCTGTGTaGCACACTCAGCTGAGTAAA +
Preference number: 4 (lower is better)
Translates to: TQTHSLLRSHSIQTAVQCPGLPV*HTQLSK
Trigger: TTTACTCAGCTGAGTGTGCCACACAGGTAGCCCTGG...GCACTGTACAGCAGTCTGGATAGAGTGTGATCTGAGAAGGGAATGGGTCTGGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp GCCATAGGGTATCTGGAGAAATGTACACAGGCAGCCTCAGCTGGAGTCATGCGACCATTGCGTACAAGCTaGTTGATGCAGAGGTTGGAG +
Preference number: 4 (lower is better)
Translates to: AIGYLEKCTQAASAGVMRPLRTS*LMQRLE
Trigger: CTCCAACCTCTGCATCAACCAGCTTGTACGCAATGG...TCGCATGACTCCAGCTGAGGCTGCCTGTGTACATTTCTCCAGATACCCTATGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp CAAGACAAGGAAGTGAAAGGGACTGCCTATGAGCCCAGGATCTTGCCCTCAGGACCATTGCGTACAAGCTaGTTGATGCAGAGGTTGGAG +
Preference number: 4 (lower is better)
Translates to: QDKEVKGTAYEPRILPSGPLRTS*LMQRLE
Trigger: CTCCAACCTCTGCATCAACCAGCTTGTACGCAATGG...TCCTGAGGGCAAGATCCTGGGCTCATAGGCAGTCCCTTTCACTTCCTTGTCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp ACCCAGACCCATTCCCTTCTCAGATCACACTCTATCCAGACTGCTGTACAGTGCCATGGCCCAGGATGTTaGCAGCAGGAATCTTGCAGT +
Preference number: 4 (lower is better)
Translates to: TQTHSLLRSHSIQTAVQCHGPGC*QQESCS
Trigger: ACTGCAAGATTCCTGCTGCCAACATCCTGGGCCATG...GCACTGTACAGCAGTCTGGATAGAGTGTGATCTGAGAAGGGAATGGGTCTGGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp CCAGACCCATTCCCTTCTCAGATCACACTCTATCCAGACTGCTGTACAGTGCGGTGCATCAACTGGAAGTaGCCGATCTTCTGGCCAAAG +
Preference number: 4 (lower is better)
Translates to: PDPFPSQITLYPDCCTVRCINWK*PIFWPK
Trigger: CTTTGGCCAGAAGATCGGCCACTTCCAGTTGATGCA...CCGCACTGTACAGCAGTCTGGATAGAGTGTGATCTGAGAAGGGAATGGGTCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp GCCATAGGGTATCTGGAGAAATGTACACAGGCAGCCTCAGCTGGAGTCATGCGATGCATCAACTGGAAGTaGCCGATCTTCTGGCCAAAG +
Preference number: 4 (lower is better)
Translates to: AIGYLEKCTQAASAGVMRCINWK*PIFWPK
Trigger: CTTTGGCCAGAAGATCGGCCACTTCCAGTTGATGCA...TCGCATGACTCCAGCTGAGGCTGCCTGTGTACATTTCTCCAGATACCCTATGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp ACCCAGACCCATTCCCTTCTCAGATCACACTCTATCCAGACTGCTGTACAGTGCTTCCCCTGCATCAACTaGAAGTGGCCGATCTTCTGG +
Preference number: 4 (lower is better)
Translates to: TQTHSLLRSHSIQTAVQCFPCIN*KWPIFW
Trigger: CCAGAAGATCGGCCACTTCCAGTTGATGCAGGGGAA...GCACTGTACAGCAGTCTGGATAGAGTGTGATCTGAGAAGGGAATGGGTCTGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp CAGGGCTTAGACAGACTGGATGAAGCGCCCCATTTTGCCACATTGTCTCCAGGCCTATCTCATACAGCTTaGCATCTCGAAGAAAGCGGC +
Preference number: 4 (lower is better)
Translates to: QGLDRLDEAPHFATLSPGLSHTA*HLEESG
Trigger: GCCGCTTTCTTCGAGATGCCAAGCTGTATGAGATAG...GCCTGGAGACAATGTGGCAAAATGGGGCGCTTCATCCAGTCTGTCTAAGCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp GACAATATGCTTCCTGCTGAGTCCATTTTAAATCACACAACACTAGCCGTGGCAGCCGCCTCACCTCGCTaGTCCCAGCCCCTATCTCAT +
Preference number: 4 (lower is better)
Translates to: DNMLPAESILNHTTLAVAAASPR*SQPLSH
Trigger: ATGAGATAGGGGCTGGGACCAGCGAGGTGAGGCGGC...TGCCACGGCTAGTGTTGTGTGATTTAAAATGGACTCAGCAGGAAGCATATTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp GACAATATGCTTCCTGCTGAGTCCATTTTAAATCACACAACACTAGCCGTGGCAGCTGACAAGAGCAGCTaGGCAGGAGGGCCTGCTGTG +
Preference number: 4 (lower is better)
Translates to: DNMLPAESILNHTTLAVAADKSS*AGGPAV
Trigger: CACAGCAGGCCCTCCTGCCCAGCTGCTCTTGTCAGC...TGCCACGGCTAGTGTTGTGTGATTTAAAATGGACTCAGCAGGAAGCATATTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp TGCTGTACAGGAGGAGCCAGTCTTCCAACAGTACACAAAAGCACGCTGTCCTCTGCAACGTCCGCCTCCTaGGTTCAAGTAATTCTCCTG +
Preference number: 4 (lower is better)
Translates to: CCTGGASLPTVHKSTLSSATSAS*VQVILL
Trigger: CAGGAGAATTACTTGAACCCAGGAGGCGGACGTTGC...AGAGGACAGCGTGCTTTTGTGTACTGTTGGAAGACTGGCTCCTCCTGTACAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp ACCCAGACCCATTCCCTTCTCAGATCACACTCTATCCAGACTGCTGTACAGTGCAGCCTCCTGAGTAGCTaGGATTACAGACGTGCACCA +
Preference number: 4 (lower is better)
Translates to: TQTHSLLRSHSIQTAVQCSLLSS*DYRRAP
Trigger: TGGTGCACGTCTGTAATCCCAGCTACTCAGGAGGCT...GCACTGTACAGCAGTCTGGATAGAGTGTGATCTGAGAAGGGAATGGGTCTGGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp TGCTGTACAGGAGGAGCCAGTCTTCCAACAGTACACAAAAGCACGCTGTCCTCTAGCCTCCTGAGTAGCTaGGATTACAGACGTGCACCA +
Preference number: 4 (lower is better)
Translates to: CCTGGASLPTVHKSTLSSSLLSS*DYRRAP
Trigger: TGGTGCACGTCTGTAATCCCAGCTACTCAGGAGGCT...AGAGGACAGCGTGCTTTTGTGTACTGTTGGAAGACTGGCTCCTCCTGTACAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp CTGTGCTTGAGCAGAGAGATCTCCTTGCCAGAGCCTCACCCAAGAGAAAGAGGTAGTCTTCTGTGTAACTaGGATTACAGGCGCGTGCCA +
Preference number: 4 (lower is better)
Translates to: LCLSREISLPEPHPRERGSLLCN*DYRRVP
Trigger: TGGCACGCGCCTGTAATCCCAGTTACACAGAAGACT...ACCTCTTTCTCTTGGGTGAGGCTCTGGCAAGGAGATCTCTCTGCTCAAGCACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp GACAATATGCTTCCTGCTGAGTCCATTTTAAATCACACAACACTAGCCGTGGCACCAGTCAGCTGTGGGTaGTCACACGGCCAGGACTGG +
Preference number: 4 (lower is better)
Translates to: DNMLPAESILNHTTLAVAPVSCG*SHGQDW
Trigger: CCAGTCCTGGCCGTGTGACCACCCACAGCTGACTGG...TGCCACGGCTAGTGTTGTGTGATTTAAAATGGACTCAGCAGGAAGCATATTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp CTGTGCTTGAGCAGAGAGATCTCCTTGCCAGAGCCTCACCCAAGAGAAAGAGGTCATGAAAGAACGGGCTaGAGGACAGGAATAGGACCT +
Preference number: 4 (lower is better)
Translates to: LCLSREISLPEPHPRERGHERTG*RTGIGP
Trigger: AGGTCCTATTCCTGTCCTCCAGCCCGTTCTTTCATG...ACCTCTTTCTCTTGGGTGAGGCTCTGGCAAGGAGATCTCTCTGCTCAAGCACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp GGTATCTGGAGAAATGTACACAGGCAGCCTCAGCTGGAGTCATGCGAGCCAACTCATGAAAGAACGGGCTaGAGGACAGGAATAGGACCT +
Preference number: 4 (lower is better)
Translates to: GIWRNVHRQPQLESCEPTHERTG*RTGIGP
Trigger: AGGTCCTATTCCTGTCCTCCAGCCCGTTCTTTCATG...AGTTGGCTCGCATGACTCCAGCTGAGGCTGCCTGTGTACATTTCTCCAGATACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp CAAGACAAGGAAGTGAAAGGGACTGCCTATGAGCCCAGGATCTTGCCCTCAGGACATGAAAGAACGGGCTaGAGGACAGGAATAGGACCT +
Preference number: 4 (lower is better)
Translates to: QDKEVKGTAYEPRILPSGHERTG*RTGIGP
Trigger: AGGTCCTATTCCTGTCCTCCAGCCCGTTCTTTCATG...TCCTGAGGGCAAGATCCTGGGCTCATAGGCAGTCCCTTTCACTTCCTTGTCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp TGCTGTGGGCAGGGTGGGAAAGCCGCCACATCTCTACTTCCCAAGAAAGGCCACTGCCATGAGCAGATCTaGATTCTAGTTCGTTTTGAC +
Preference number: 4 (lower is better)
Translates to: CCGQGGKAATSLLPKKGHCHEQI*ILVRFD
Trigger: GTCAAAACGAACTAGAATCCAGATCTGCTCATGGCA...GTGGCCTTTCTTGGGAAGTAGAGATGTGGCGGCTTTCCCACCCTGCCCACAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp CTGTGCTTGAGCAGAGAGATCTCCTTGCCAGAGCCTCACCCAAGAGAAAGAGGTCCAGTTCCCTCTTTTTaGAACTCGGAAGGGGTGGAA +
Preference number: 4 (lower is better)
Translates to: LCLSREISLPEPHPRERGPVPSF*NSEGVE
Trigger: TTCCACCCCTTCCGAGTTCCAAAAAGAGGGAACTGG...ACCTCTTTCTCTTGGGTGAGGCTCTGGCAAGGAGATCTCTCTGCTCAAGCACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp GCCATAGGGTATCTGGAGAAATGTACACAGGCAGCCTCAGCTGGAGTCATGCGACCAGTTCCCTCTTTTTaGAACTCGGAAGGGGTGGAA +
Preference number: 4 (lower is better)
Translates to: AIGYLEKCTQAASAGVMRPVPSF*NSEGVE
Trigger: TTCCACCCCTTCCGAGTTCCAAAAAGAGGGAACTGG...TCGCATGACTCCAGCTGAGGCTGCCTGTGTACATTTCTCCAGATACCCTATGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp TGGGAAAGGGAGGCTGAGACCTCTCTCCTAAGGGCTGATTTTACCTTCCTGTCCCCAGTTCCCTCTTTTTaGAACTCGGAAGGGGTGGAA +
Preference number: 4 (lower is better)
Translates to: WEREAETSLLRADFTFLSPVPSF*NSEGVE
Trigger: TTCCACCCCTTCCGAGTTCCAAAAAGAGGGAACTGG...GGACAGGAAGGTAAAATCAGCCCTTAGGAGAGAGGTCTCAGCCTCCCTTTCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp CTGTGCTTGAGCAGAGAGATCTCCTTGCCAGAGCCTCACCCAAGAGAAAGAGGTCAGGATAGGTGCTGCTaGGCTGAGAACCAAGAAAAC +
Preference number: 4 (lower is better)
Translates to: LCLSREISLPEPHPRERGQDRCC*AENQEN
Trigger: GTTTTCTTGGTTCTCAGCCCAGCAGCACCTATCCTG...ACCTCTTTCTCTTGGGTGAGGCTCTGGCAAGGAGATCTCTCTGCTCAAGCACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp TGGGAAAGGGAGGCTGAGACCTCTCTCCTAAGGGCTGATTTTACCTTCCTGTCCACATTGTCTCCAGGCTaGTCTCTCCAGCCACACATT +
Preference number: 4 (lower is better)
Translates to: WEREAETSLLRADFTFLSTLSPG*SLQPHI
Trigger: AATGTGTGGCTGGAGAGACCAGCCTGGAGACAATGT...GGACAGGAAGGTAAAATCAGCCCTTAGGAGAGAGGTCTCAGCCTCCCTTTCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp CCAGACCCATTCCCTTCTCAGATCACACTCTATCCAGACTGCTGTACAGTGCGGACATTGTCTCCAGGCTaGTCTCTCCAGCCACACATT +
Preference number: 4 (lower is better)
Translates to: PDPFPSQITLYPDCCTVRTLSPG*SLQPHI
Trigger: AATGTGTGGCTGGAGAGACCAGCCTGGAGACAATGT...CCGCACTGTACAGCAGTCTGGATAGAGTGTGATCTGAGAAGGGAATGGGTCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR TCA 90 bp AGCAAGATGGCCCTTTTAGTCACATTCATCTCCAACATAGCAGGGAGCAAGACAACTGAACAGGGGCTGTaGTGCCCAATACGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: SKMALLVTFISNIAGSKTTEQGL*CPIRPG
Trigger: ACCTGGGCGTATTGGGCATCACAGCCCCTGTTCAGT...TGTCTTGCTCCCTGCTATGTTGGAGATGAATGTGACTAAAAGGGCCATCTTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR TCA 90 bp ACCCAGACCCATTCCCTTCTCAGATCACACTCTATCCAGACTGCTGTACAGTGCCGATGTACTCACCACTaGTCAGCTTCGGGAGATACT +
Preference number: 4 (lower is better)
Translates to: TQTHSLLRSHSIQTAVQCRCTHH*SASGDT
Trigger: AGTATCTCCCGAAGCTGATCAGTGGTGAGTACATCG...GCACTGTACAGCAGTCTGGATAGAGTGTGATCTGAGAAGGGAATGGGTCTGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR TCA 90 bp AAAGGAAGCTTCTGGTCTGAGATCCAAGAGGCGAGTTGGGGGAGCAGCACGCGGAACATAGAAGGATTTTaGGGAAAGGAAGCTTCTGGT +
Preference number: 4 (lower is better)
Translates to: KGSFWSEIQEASWGSSTRNIEGF*GKEASG
Trigger: ACCAGAAGCTTCCTTTCCTCAAAATCCTTCTATGTT...CCGCGTGCTGCTCCCCCAACTCGCCTCTTGGATCTCAGACCAGAAGCTTCCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000481262.6
ENST00000491554.6
CDS-3UTR TCA 90 bp GCCATAGGGTATCTGGAGAAATGTACACAGGCAGCCTCAGCTGGAGTCATGCGACCATGGGAAAGTCATTaGTGTAGCCATTGCCACCAA +
Preference number: 4 (lower is better)
Translates to: AIGYLEKCTQAASAGVMRPWESH*CSHCHQ
Trigger: TTGGTGGCAATGGCTACATCAATGACTTTCCCATGG...TCGCATGACTCCAGCTGAGGCTGCCTGTGTACATTTCTCCAGATACCCTATGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR TCA 90 bp CTGTGCTTGAGCAGAGAGATCTCCTTGCCAGAGCCTCACCCAAGAGAAAGAGGTCCATGGGAAAGTCATTaGTGTAGCCATTGCCACCAA +
Preference number: 4 (lower is better)
Translates to: LCLSREISLPEPHPRERGPWESH*CSHCHQ
Trigger: TTGGTGGCAATGGCTACATCAATGACTTTCCCATGG...ACCTCTTTCTCTTGGGTGAGGCTCTGGCAAGGAGATCTCTCTGCTCAAGCACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR TCA 90 bp CCAGACCCATTCCCTTCTCAGATCACACTCTATCCAGACTGCTGTACAGTGCGGCCATGGGAAAGTCATTaGTGTAGCCATTGCCACCAA +
Preference number: 4 (lower is better)
Translates to: PDPFPSQITLYPDCCTVRPWESH*CSHCHQ
Trigger: TTGGTGGCAATGGCTACATCAATGACTTTCCCATGG...CCGCACTGTACAGCAGTCTGGATAGAGTGTGATCTGAGAAGGGAATGGGTCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR TCA 90 bp TGCTGTGGGCAGGGTGGGAAAGCCGCCACATCTCTACTTCCCAAGAAAGGCCACCAATATGCTTCCTGCTaGGTCCATTTTAAATCACAC +
Preference number: 4 (lower is better)
Translates to: CCGQGGKAATSLLPKKGHQYASC*VHFKSH
Trigger: GTGTGATTTAAAATGGACTCAGCAGGAAGCATATTG...GTGGCCTTTCTTGGGAAGTAGAGATGTGGCGGCTTTCCCACCCTGCCCACAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR TCA 90 bp TGCTGTGGGCAGGGTGGGAAAGCCGCCACATCTCTACTTCCCAAGAAAGGCCACCCCCAGAAAAGAGACTaGAAGTTGAATTTGCCTTAT +
Preference number: 4 (lower is better)
Translates to: CCGQGGKAATSLLPKKGHPQKRD*KLNLPY
Trigger: ATAAGGCAAATTCAACTTTCAGTCTCTTTTCTGGGG...GTGGCCTTTCTTGGGAAGTAGAGATGTGGCGGCTTTCCCACCCTGCCCACAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR TCA 90 bp GGTATCTGGAGAAATGTACACAGGCAGCCTCAGCTGGAGTCATGCGAGCCAACTCCCCCATTTTTGCCATaGGCAGATCTGGATTCTAGT +
Preference number: 4 (lower is better)
Translates to: GIWRNVHRQPQLESCEPTPPFLP*ADLDSS
Trigger: ACTAGAATCCAGATCTGCTCATGGCAAAAATGGGGG...AGTTGGCTCGCATGACTCCAGCTGAGGCTGCCTGTGTACATTTCTCCAGATACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR TCA 90 bp TGCTGTACAGGAGGAGCCAGTCTTCCAACAGTACACAAAAGCACGCTGTCCTCTAGCAAGACAAGGAAGTaGAAGGGACTGCCTATGAGC +
Preference number: 4 (lower is better)
Translates to: CCTGGASLPTVHKSTLSSSKTRK*KGLPMS
Trigger: GCTCATAGGCAGTCCCTTTCACTTCCTTGTCTTGCT...AGAGGACAGCGTGCTTTTGTGTACTGTTGGAAGACTGGCTCCTCCTGTACAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR GCA 90 bp GCTGGAAGGACTTCCAGAGCTGCCCCAGACCAAAGGCACAGGGATGAGAAACATGTAAAGAATCACACCTaGACAGTCCTTAGCAGTGCA +
Preference number: 4 (lower is better)
Translates to: AGRTSRAAPDQRHRDEKHVKNHT*TVLSSA
Trigger: TGCACTGCTAAGGACTGTGCAGGTGTGATTCTTTAC...ATGTTTCTCATCCCTGTGCCTTTGGTCTGGGGCAGCTCTGGAAGTCCTTCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466756.2
CDS-3UTR GCA 90 bp AGAATCACACCTGCACAGTCCTTAGCAGTGCAATGGCCCTCATCGCAGGCCTTGGTAAAGAATCACACCTaGACAGTCCTTAGCAGTGCA +
Preference number: 4 (lower is better)
Translates to: RITPAQSLAVQWPSSQALVKNHT*TVLSSA
Trigger: TGCACTGCTAAGGACTGTGCAGGTGTGATTCTTTAC...CAAGGCCTGCGATGAGGGCCATTGCACTGCTAAGGACTGTGCAGGTGTGATTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481262.6
CDS-3UTR GCA 90 bp TGCTGTACAGGAGGAGCCAGTCTTCCAACAGTACACAAAAGCACGCTGTCCTCTCAAAATTCCTGCCTCTaGTCCTCGCTTAGCCCATTG +
Preference number: 4 (lower is better)
Translates to: CCTGGASLPTVHKSTLSSQNSCL*SSLSPL
Trigger: CAATGGGCTAAGCGAGGAGCAGAGGCAGGAATTTTG...AGAGGACAGCGTGCTTTTGTGTACTGTTGGAAGACTGGCTCCTCCTGTACAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000479013.7
ENST00000650656.1
CDS-3UTR GCA 90 bp ACCCAGACCCATTCCCTTCTCAGATCACACTCTATCCAGACTGCTGTACAGTGCTGCTTCCAAAATTCCTaGCTCTGCTCCTCGCTTAGC +
Preference number: 4 (lower is better)
Translates to: TQTHSLLRSHSIQTAVQCCFQNS*LCSSLS
Trigger: GCTAAGCGAGGAGCAGAGGCAGGAATTTTGGAAGCA...GCACTGTACAGCAGTCTGGATAGAGTGTGATCTGAGAAGGGAATGGGTCTGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479013.7
ENST00000650656.1
CDS-3UTR GCA 90 bp CAAGACAAGGAAGTGAAAGGGACTGCCTATGAGCCCAGGATCTTGCCCTCAGGAGGACTAGTGAAAGTCTaGATTGAAGGCTCTGCCGAT +
Preference number: 4 (lower is better)
Translates to: QDKEVKGTAYEPRILPSGGLVKV*IEGSAD
Trigger: ATCGGCAGAGCCTTCAATGCAGACTTTCACTAGTCC...TCCTGAGGGCAAGATCCTGGGCTCATAGGCAGTCCCTTTCACTTCCTTGTCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR GCA 90 bp ACCCAGACCCATTCCCTTCTCAGATCACACTCTATCCAGACTGCTGTACAGTGCCTCAGCCTCCTGAAGTaGTGGGATTACAAGCATGAG +
Preference number: 4 (lower is better)
Translates to: TQTHSLLRSHSIQTAVQCLSLLK*WDYKHE
Trigger: CTCATGCTTGTAATCCCAGCACTTCAGGAGGCTGAG...GCACTGTACAGCAGTCTGGATAGAGTGTGATCTGAGAAGGGAATGGGTCTGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR GCA 90 bp AGGAAGCAGCGGCAAGTAGATTGCTTCTCCCCAGATAGGTTTGTTTCACAATATACAAGCTCGGCTCACTaGAACGTCCGCCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: RKQRQVDCFSPDRFVSQYTSSAH*NVRLLG
Trigger: ACCCAGGAGGCGGACGTTGCAGTGAGCCGAGCTTGT...ATATTGTGAAACAAACCTATCTGGGGAGAAGCAATCTACTTGCCGCTGCTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR GCA 90 bp GACAATATGCTTCCTGCTGAGTCCATTTTAAATCACACAACACTAGCCGTGGCAACAAGCTCGGCTCACTaGAACGTCCGCCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: DNMLPAESILNHTTLAVATSSAH*NVRLLG
Trigger: ACCCAGGAGGCGGACGTTGCAGTGAGCCGAGCTTGT...TGCCACGGCTAGTGTTGTGTGATTTAAAATGGACTCAGCAGGAAGCATATTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR GCA 90 bp AGGAAGCAGCGGCAAGTAGATTGCTTCTCCCCAGATAGGTTTGTTTCACAATATTCGCCCAGGCTGGAGTaGAATGGCACAAGCTCGGCT +
Preference number: 4 (lower is better)
Translates to: RKQRQVDCFSPDRFVSQYSPRLE*NGTSSA
Trigger: AGCCGAGCTTGTGCCATTGCACTCCAGCCTGGGCGA...ATATTGTGAAACAAACCTATCTGGGGAGAAGCAATCTACTTGCCGCTGCTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR GCA 90 bp GACAATATGCTTCCTGCTGAGTCCATTTTAAATCACACAACACTAGCCGTGGCACGCGATCTCAGCTCCTaGAACCTCTGCCTCCTGCGT +
Preference number: 4 (lower is better)
Translates to: DNMLPAESILNHTTLAVARDLSS*NLCLLR
Trigger: ACGCAGGAGGCAGAGGTTGCAGGAGCTGAGATCGCG...TGCCACGGCTAGTGTTGTGTGATTTAAAATGGACTCAGCAGGAAGCATATTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR GCA 90 bp AGGAAGCAGCGGCAAGTAGATTGCTTCTCCCCAGATAGGTTTGTTTCACAATATGGAACAGCACTTGGCTaGAGGCCAGGACCAAGAGCC +
Preference number: 4 (lower is better)
Translates to: RKQRQVDCFSPDRFVSQYGTALG*RPGPRA
Trigger: GGCTCTTGGTCCTGGCCTGCAGCCAAGTGCTGTTCC...ATATTGTGAAACAAACCTATCTGGGGAGAAGCAATCTACTTGCCGCTGCTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp TGCTGTACAGGAGGAGCCAGTCTTCCAACAGTACACAAAAGCACGCTGTCCTCTTGCATCAACTGGAAGTaGCCGATCTTCTGGCCAAAG +
Preference number: 4 (lower is better)
Translates to: CCTGGASLPTVHKSTLSSCINWK*PIFWPK
Trigger: CTTTGGCCAGAAGATCGGCCACTTCCAGTTGATGCA...AGAGGACAGCGTGCTTTTGTGTACTGTTGGAAGACTGGCTCCTCCTGTACAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp ACCCAGACCCATTCCCTTCTCAGATCACACTCTATCCAGACTGCTGTACAGTGCCCTCATCGCAGGCCTTaGCGACATTGTAGACATACT +
Preference number: 4 (lower is better)
Translates to: TQTHSLLRSHSIQTAVQCPHRRP*RHCRHT
Trigger: AGTATGTCTACAATGTCGCCAAGGCCTGCGATGAGG...GCACTGTACAGCAGTCTGGATAGAGTGTGATCTGAGAAGGGAATGGGTCTGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp CCTGCCAAGGAGCTCTGTCCCAAAGACGTTGGAGAACATAGAAGGATTTTGAGGAAAGGTGCAGAGCTGTaGTATAGGGGTGAGGCAGCA +
Preference number: 4 (lower is better)
Translates to: PAKELCPKDVGEHRRILRKGAEL*YRGEAA
Trigger: TGCTGCCTCACCCCTATACCACAGCTCTGCACCTTT...CCTCAAAATCCTTCTATGTTCTCCAACGTCTTTGGGACAGAGCTCCTTGGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000481262.6
ENST00000491554.6
CDS-3UTR CCA 90 bp AGGAAGCAGCGGCAAGTAGATTGCTTCTCCCCAGATAGGTTTGTTTCACAATATACGGGCAAAAGCGAGTaGGCCCGCTGGGAAACGAAG +
Preference number: 4 (lower is better)
Translates to: RKQRQVDCFSPDRFVSQYTGKSE*ARWETK
Trigger: CTTCGTTTCCCAGCGGGCCCACTCGCTTTTGCCCGT...ATATTGTGAAACAAACCTATCTGGGGAGAAGCAATCTACTTGCCGCTGCTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp AGCAAGATGGCCCTTTTAGTCACATTCATCTCCAACATAGCAGGGAGCAAGACACCCAAGAGAAAGAGGTaGGTACCTGCATGCCCCCAG +
Preference number: 4 (lower is better)
Translates to: SKMALLVTFISNIAGSKTPKRKR*VPACPQ
Trigger: CTGGGGGCATGCAGGTACCCACCTCTTTCTCTTGGG...TGTCTTGCTCCCTGCTATGTTGGAGATGAATGTGACTAAAAGGGCCATCTTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp CAAGACAAGGAAGTGAAAGGGACTGCCTATGAGCCCAGGATCTTGCCCTCAGGACCAAGTTCCAATTCATaGAGAGGGGCCATGATTCTG +
Preference number: 4 (lower is better)
Translates to: QDKEVKGTAYEPRILPSGPSSNS*RGAMIL
Trigger: CAGAATCATGGCCCCTCTCCATGAATTGGAACTTGG...TCCTGAGGGCAAGATCCTGGGCTCATAGGCAGTCCCTTTCACTTCCTTGTCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp CCAGACCCATTCCCTTCTCAGATCACACTCTATCCAGACTGCTGTACAGTGCGGCCAAGTTCCAATTCATaGAGAGGGGCCATGATTCTG +
Preference number: 4 (lower is better)
Translates to: PDPFPSQITLYPDCCTVRPSSNS*RGAMIL
Trigger: CAGAATCATGGCCCCTCTCCATGAATTGGAACTTGG...CCGCACTGTACAGCAGTCTGGATAGAGTGTGATCTGAGAAGGGAATGGGTCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp CAACAATCCCCAGACAATATGCTTCCTGCTGAGTCCATTTTAAATCACACAACAACTGGATGGTGCCCGTaGCAGGGCGGTGCACAAGGG +
Preference number: 4 (lower is better)
Translates to: QQSPDNMLPAESILNHTTTGWCP*QGGAQG
Trigger: CCCTTGTGCACCGCCCTGCCACGGGCACCATCCAGT...TGTTGTGTGATTTAAAATGGACTCAGCAGGAAGCATATTGTCTGGGGATTGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp CAACAATCCCCAGACAATATGCTTCCTGCTGAGTCCATTTTAAATCACACAACATCACACGGCCAGGACTaGATGGTGCCCGTGGCAGGG +
Preference number: 4 (lower is better)
Translates to: QQSPDNMLPAESILNHTTSHGQD*MVPVAG
Trigger: CCCTGCCACGGGCACCATCCAGTCCTGGCCGTGTGA...TGTTGTGTGATTTAAAATGGACTCAGCAGGAAGCATATTGTCTGGGGATTGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
3UTR CAA 72 bp TTAGACAGACTGGATGAAGCGCCCCATTTTGCCACATaGTCTCCAGGCTGGTCTCTCCAGCCACACATTAAG +
Preference number: 4 (lower is better)
Translates to: LDRLDEAPHFAT*SPGWSLQPHIK
Trigger: CTTAATGTGTGGCTGGAGAGACCAGCCTGGAGACAATGTGGCAAAATGGGGCGCTTCATCCAGTCTGTCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR TCA 90 bp GACAATATGCTTCCTGCTGAGTCCATTTTAAATCACACAACACTAGCCGTGGCAACTGAACAGGGGCTGTaGTGCCCAATACGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: DNMLPAESILNHTTLAVATEQGL*CPIRPG
Trigger: ACCTGGGCGTATTGGGCATCACAGCCCCTGTTCAGT...TGCCACGGCTAGTGTTGTGTGATTTAAAATGGACTCAGCAGGAAGCATATTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR TCA 90 bp AGGAAGCAGCGGCAAGTAGATTGCTTCTCCCCAGATAGGTTTGTTTCACAATATCCTCGCTTAGCCCATTaGTTGCATCGTCCACGGGCA +
Preference number: 4 (lower is better)
Translates to: RKQRQVDCFSPDRFVSQYPRLAH*LHRPRA
Trigger: TGCCCGTGGACGATGCAATCAATGGGCTAAGCGAGG...ATATTGTGAAACAAACCTATCTGGGGAGAAGCAATCTACTTGCCGCTGCTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR TCA 90 bp ACCCAGACCCATTCCCTTCTCAGATCACACTCTATCCAGACTGCTGTACAGTGCCCCCCATTTTTGCCATaGGCAGATCTGGATTCTAGT +
Preference number: 4 (lower is better)
Translates to: TQTHSLLRSHSIQTAVQCPPFLP*ADLDSS
Trigger: ACTAGAATCCAGATCTGCTCATGGCAAAAATGGGGG...GCACTGTACAGCAGTCTGGATAGAGTGTGATCTGAGAAGGGAATGGGTCTGGGT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR TCA 90 bp AGGAAGCAGCGGCAAGTAGATTGCTTCTCCCCAGATAGGTTTGTTTCACAATATGAAAGGGACTGCCTATaGGCCCAGGATCTTGCCCTC +
Preference number: 4 (lower is better)
Translates to: RKQRQVDCFSPDRFVSQYERDCL*AQDLAL
Trigger: GAGGGCAAGATCCTGGGCTCATAGGCAGTCCCTTTC...ATATTGTGAAACAAACCTATCTGGGGAGAAGCAATCTACTTGCCGCTGCTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR GCA 90 bp TGGGAAAGGGAGGCTGAGACCTCTCTCCTAAGGGCTGATTTTACCTTCCTGTCCGTAAAGAATCACACCTaGACAGTCCTTAGCAGTGCA +
Preference number: 4 (lower is better)
Translates to: WEREAETSLLRADFTFLSVKNHT*TVLSSA
Trigger: TGCACTGCTAAGGACTGTGCAGGTGTGATTCTTTAC...GGACAGGAAGGTAAAATCAGCCCTTAGGAGAGAGGTCTCAGCCTCCCTTTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR GCA 90 bp AGGATTTTGAGGAAAGGAAGCTTCTGGTCTGAGATCCAAGAGGCGAGTTGGGGGAAGCTTTGTAAACCCTaGCAAGGAGCTCTGTCCCAA +
Preference number: 4 (lower is better)
Translates to: RILRKGSFWSEIQEASWGKLCKP*QGALSQ
Trigger: TTGGGACAGAGCTCCTTGGCAGGGTTTACAAAGCTT...CCCCCAACTCGCCTCTTGGATCTCAGACCAGAAGCTTCCTTTCCTCAAAATCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000481262.6
ENST00000491554.6
CDS-3UTR GCA 90 bp ACCCAGACCCATTCCCTTCTCAGATCACACTCTATCCAGACTGCTGTACAGTGCCAGCGGCAAGTAGATTaGTTCTCCCCAGATAGGTTT +
Preference number: 4 (lower is better)
Translates to: TQTHSLLRSHSIQTAVQCQRQVD*FSPDRF
Trigger: AAACCTATCTGGGGAGAAGCAATCTACTTGCCGCTG...GCACTGTACAGCAGTCTGGATAGAGTGTGATCTGAGAAGGGAATGGGTCTGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR GCA 90 bp CCAGACCCATTCCCTTCTCAGATCACACTCTATCCAGACTGCTGTACAGTGCGGGAACACCCCCATTTTTaGCATGAGCAGATCTGGATT +
Preference number: 4 (lower is better)
Translates to: PDPFPSQITLYPDCCTVREHPHF*HEQIWI
Trigger: AATCCAGATCTGCTCATGGCAAAAATGGGGGTGTTC...CCGCACTGTACAGCAGTCTGGATAGAGTGTGATCTGAGAAGGGAATGGGTCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR GCA 90 bp CTGTGCTTGAGCAGAGAGATCTCCTTGCCAGAGCCTCACCCAAGAGAAAGAGGTGAACACCCCCATTTTTaGCATGAGCAGATCTGGATT +
Preference number: 4 (lower is better)
Translates to: LCLSREISLPEPHPRERGEHPHF*HEQIWI
Trigger: AATCCAGATCTGCTCATGGCAAAAATGGGGGTGTTC...ACCTCTTTCTCTTGGGTGAGGCTCTGGCAAGGAGATCTCTCTGCTCAAGCACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR GCA 90 bp AGCAAGATGGCCCTTTTAGTCACATTCATCTCCAACATAGCAGGGAGCAAGACAATGAGCCCAGGATCTTaGCCTCAGGATGGGACGGAA +
Preference number: 4 (lower is better)
Translates to: SKMALLVTFISNIAGSKTMSPGS*PQDGTE
Trigger: TTCCGTCCCATCCTGAGGGCAAGATCCTGGGCTCAT...TGTCTTGCTCCCTGCTATGTTGGAGATGAATGTGACTAAAAGGGCCATCTTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR GCA 90 bp AGCAAGATGGCCCTTTTAGTCACATTCATCTCCAACATAGCAGGGAGCAAGACACCCAGGTTCCCCAGCTaGTTCCAAAATTCTCGCAGG +
Preference number: 4 (lower is better)
Translates to: SKMALLVTFISNIAGSKTPRFPS*FQNSRR
Trigger: CCTGCGAGAATTTTGGAAGCAGCTGGGGAACCTGGG...TGTCTTGCTCCCTGCTATGTTGGAGATGAATGTGACTAAAAGGGCCATCTTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000487418.8
ENST00000651168.1
CDS-3UTR GCA 90 bp GGGTATCTGGAGAAATGTACACAGGCAGCCTCAGCTGGAGTCATGCGAGCCAACTTCTTTTTATCTCCCTaGGTTGAAATAGCAGCCCCT +
Preference number: 4 (lower is better)
Translates to: GYLEKCTQAASAGVMRANFFLSP*VEIAAP
Trigger: AGGGGCTGCTATTTCAACGCAGGGAGATAAAAAGAA...GTTGGCTCGCATGACTCCAGCTGAGGCTGCCTGTGTACATTTCTCCAGATACCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp AGCAAGATGGCCCTTTTAGTCACATTCATCTCCAACATAGCAGGGAGCAAGACACATTGGGCTCACTCATaGCCAGGGCTCCGATGTACT +
Preference number: 4 (lower is better)
Translates to: SKMALLVTFISNIAGSKTHWAHS*PGLRCT
Trigger: AGTACATCGGAGCCCTGGCCATGAGTGAGCCCAATG...TGTCTTGCTCCCTGCTATGTTGGAGATGAATGTGACTAAAAGGGCCATCTTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp GACAATATGCTTCCTGCTGAGTCCATTTTAAATCACACAACACTAGCCGTGGCACATCAGAGCCTGCATTaGGCTCACTCATGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: DNMLPAESILNHTTLAVAHQSLH*AHSWPG
Trigger: CCCTGGCCATGAGTGAGCCCAATGCAGGCTCTGATG...TGCCACGGCTAGTGTTGTGTGATTTAAAATGGACTCAGCAGGAAGCATATTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp ACCCAGACCCATTCCCTTCTCAGATCACACTCTATCCAGACTGCTGTACAGTGCCTATCTCATACAGCTTaGCATCTCGAAGAAAGCGGC +
Preference number: 4 (lower is better)
Translates to: TQTHSLLRSHSIQTAVQCLSHTA*HLEESG
Trigger: GCCGCTTTCTTCGAGATGCCAAGCTGTATGAGATAG...GCACTGTACAGCAGTCTGGATAGAGTGTGATCTGAGAAGGGAATGGGTCTGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp CAACAATCCCCAGACAATATGCTTCCTGCTGAGTCCATTTTAAATCACACAACAGCCGCCTCACCTCGCTaGTCCCAGCCCCTATCTCAT +
Preference number: 4 (lower is better)
Translates to: QQSPDNMLPAESILNHTTAASPR*SQPLSH
Trigger: ATGAGATAGGGGCTGGGACCAGCGAGGTGAGGCGGC...TGTTGTGTGATTTAAAATGGACTCAGCAGGAAGCATATTGTCTGGGGATTGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp CAACAATCCCCAGACAATATGCTTCCTGCTGAGTCCATTTTAAATCACACAACAGCTGACAAGAGCAGCTaGGCAGGAGGGCCTGCTGTG +
Preference number: 4 (lower is better)
Translates to: QQSPDNMLPAESILNHTTADKSS*AGGPAV
Trigger: CACAGCAGGCCCTCCTGCCCAGCTGCTCTTGTCAGC...TGTTGTGTGATTTAAAATGGACTCAGCAGGAAGCATATTGTCTGGGGATTGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp AGGAAGCAGCGGCAAGTAGATTGCTTCTCCCCAGATAGGTTTGTTTCACAATATCCCAAGAGAAAGAGGTaGGTACCTGCATGCCCCCAG +
Preference number: 4 (lower is better)
Translates to: RKQRQVDCFSPDRFVSQYPKRKR*VPACPQ
Trigger: CTGGGGGCATGCAGGTACCCACCTCTTTCTCTTGGG...ATATTGTGAAACAAACCTATCTGGGGAGAAGCAATCTACTTGCCGCTGCTTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp GACAATATGCTTCCTGCTGAGTCCATTTTAAATCACACAACACTAGCCGTGGCACAGGCTGGAGTGCAATaGCACAAGCTCGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: DNMLPAESILNHTTLAVAQAGVQ*HKLGSL
Trigger: CAGTGAGCCGAGCTTGTGCCATTGCACTCCAGCCTG...TGCCACGGCTAGTGTTGTGTGATTTAAAATGGACTCAGCAGGAAGCATATTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp GGTATCTGGAGAAATGTACACAGGCAGCCTCAGCTGGAGTCATGCGAGCCAACTTCCTTTAAAACTCACTaGGAGATCTGGGAAAGGGAG +
Preference number: 4 (lower is better)
Translates to: GIWRNVHRQPQLESCEPTSFKTH*EIWERE
Trigger: CTCCCTTTCCCAGATCTCCCAGTGAGTTTTAAAGGA...AGTTGGCTCGCATGACTCCAGCTGAGGCTGCCTGTGTACATTTCTCCAGATACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp AGCAAGATGGCCCTTTTAGTCACATTCATCTCCAACATAGCAGGGAGCAAGACAAGTGCGGCCCAAAGCTaGAATTCTCAGAACACCCCC +
Preference number: 4 (lower is better)
Translates to: SKMALLVTFISNIAGSKTSAAQS*NSQNTP
Trigger: GGGGGTGTTCTGAGAATTCCAGCTTTGGGCCGCACT...TGTCTTGCTCCCTGCTATGTTGGAGATGAATGTGACTAAAAGGGCCATCTTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp CAACAATCCCCAGACAATATGCTTCCTGCTGAGTCCATTTTAAATCACACAACAAGGCGTTGCTGCCCTTaGACCGCACCCGAGCCAATC +
Preference number: 4 (lower is better)
Translates to: QQSPDNMLPAESILNHTTRRCCP*TAPEPI
Trigger: GATTGGCTCGGGTGCGGTCCAAGGGCAGCAACGCCT...TGTTGTGTGATTTAAAATGGACTCAGCAGGAAGCATATTGTCTGGGGATTGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650656.1
ENST00000651168.1
CDS-3UTR TCA 90 bp CACAGGGATGAGAAACATGGCAGTGAGGACTCCTTGCAACAAGAACACGAACATTGTGGCACACTCAGCTaGGTAAAGAATCACACCTGC +
Preference number: 4 (lower is better)
Translates to: HRDEKHGSEDSLQQEHEHCGTLS*VKNHTC
Trigger: GCAGGTGTGATTCTTTACTCAGCTGAGTGTGCCACA...ATGTTCGTGTTCTTGTTGCAAGGAGTCCTCACTGCCATGTTTCTCATCCCTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466756.2
CDS-3UTR TCA 90 bp CAACAATCCCCAGACAATATGCTTCCTGCTGAGTCCATTTTAAATCACACAACACTGGGAAAGGGAGGCTaGGACCTCTCTCCTAAGGGC +
Preference number: 4 (lower is better)
Translates to: QQSPDNMLPAESILNHTTLGKGG*DLSPKG
Trigger: GCCCTTAGGAGAGAGGTCTCAGCCTCCCTTTCCCAG...TGTTGTGTGATTTAAAATGGACTCAGCAGGAAGCATATTGTCTGGGGATTGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR TCA 90 bp GGGCCACCTAAGCTTTGTAAACCCTGCCAAGGAGCTCTGTCCCAAAGACGTTGGAGAGTGATAACTTTATaGCAGCAACACGTAATGGCT +
Preference number: 4 (lower is better)
Translates to: GPPKLCKPCQGALSQRRWRVITL*QQHVMA
Trigger: AGCCATTACGTGTTGCTGTCATAAAGTTATCACTCT...CCAACGTCTTTGGGACAGAGCTCCTTGGCAGGGTTTACAAAGCTTAGGTGGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491554.6
CDS-3UTR GCA 90 bp ACCCAGACCCATTCCCTTCTCAGATCACACTCTATCCAGACTGCTGTACAGTGCGTAAAGAATCACACCTaGACAGTCCTTAGCAGTGCA +
Preference number: 4 (lower is better)
Translates to: TQTHSLLRSHSIQTAVQCVKNHT*TVLSSA
Trigger: TGCACTGCTAAGGACTGTGCAGGTGTGATTCTTTAC...GCACTGTACAGCAGTCTGGATAGAGTGTGATCTGAGAAGGGAATGGGTCTGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR GCA 90 bp AGGAAGCAGCGGCAAGTAGATTGCTTCTCCCCAGATAGGTTTGTTTCACAATATGTAACTGAGCCCCACTaGTCCGGAAGCTCGGGATAT +
Preference number: 4 (lower is better)
Translates to: RKQRQVDCFSPDRFVSQYVTEPH*SGSSGY
Trigger: ATATCCCGAGCTTCCGGAGCAGTGGGGCTCAGTTAC...ATATTGTGAAACAAACCTATCTGGGGAGAAGCAATCTACTTGCCGCTGCTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR GCA 90 bp AGGAAGCAGCGGCAAGTAGATTGCTTCTCCCCAGATAGGTTTGTTTCACAATATTCAGCCATCTTCCCCTaGATCAACTGGAAGTGGCCG +
Preference number: 4 (lower is better)
Translates to: RKQRQVDCFSPDRFVSQYSAIFP*INWKWP
Trigger: CGGCCACTTCCAGTTGATGCAGGGGAAGATGGCTGA...ATATTGTGAAACAAACCTATCTGGGGAGAAGCAATCTACTTGCCGCTGCTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR GCA 90 bp CAACAATCCCCAGACAATATGCTTCCTGCTGAGTCCATTTTAAATCACACAACACGCAGTCGCCATCTCTaGCATGCACGAAGAGCCAGC +
Preference number: 4 (lower is better)
Translates to: QQSPDNMLPAESILNHTTRSRHL*HARRAS
Trigger: GCTGGCTCTTCGTGCATGGCAGAGATGGCGACTGCG...TGTTGTGTGATTTAAAATGGACTCAGCAGGAAGCATATTGTCTGGGGATTGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR GCA 90 bp GACAATATGCTTCCTGCTGAGTCCATTTTAAATCACACAACACTAGCCGTGGCACCCAGGTTCCCCAGCTaGTTCCAAAATTCCTGCCTC +
Preference number: 4 (lower is better)
Translates to: DNMLPAESILNHTTLAVAPRFPS*FQNSCL
Trigger: GAGGCAGGAATTTTGGAAGCAGCTGGGGAACCTGGG...TGCCACGGCTAGTGTTGTGTGATTTAAAATGGACTCAGCAGGAAGCATATTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000479013.7
ENST00000650656.1
CDS-3UTR GCA 90 bp AGGAAGCAGCGGCAAGTAGATTGCTTCTCCCCAGATAGGTTTGTTTCACAATATCCCAGGTTCCCCAGCTaGTTCCAAAATTCCTGCCTC +
Preference number: 4 (lower is better)
Translates to: RKQRQVDCFSPDRFVSQYPRFPS*FQNSCL
Trigger: GAGGCAGGAATTTTGGAAGCAGCTGGGGAACCTGGG...ATATTGTGAAACAAACCTATCTGGGGAGAAGCAATCTACTTGCCGCTGCTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000479013.7
ENST00000650656.1
CDS-3UTR GCA 90 bp AGCAAGATGGCCCTTTTAGTCACATTCATCTCCAACATAGCAGGGAGCAAGACACACCAAAACACTGAATaGCGTCCAGGGCTACCTGTG +
Preference number: 4 (lower is better)
Translates to: SKMALLVTFISNIAGSKTHQNTE*RPGLPV
Trigger: CACAGGTAGCCCTGGACGGCATTCAGTGTTTTGGTG...TGTCTTGCTCCCTGCTATGTTGGAGATGAATGTGACTAAAAGGGCCATCTTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR GCA 90 bp GACAATATGCTTCCTGCTGAGTCCATTTTAAATCACACAACACTAGCCGTGGCAAGCTCCTGCAACCTCTaGCTCCTGCGTTCAAGCGAT +
Preference number: 4 (lower is better)
Translates to: DNMLPAESILNHTTLAVASSCNL*LLRSSD
Trigger: ATCGCTTGAACGCAGGAGGCAGAGGTTGCAGGAGCT...TGCCACGGCTAGTGTTGTGTGATTTAAAATGGACTCAGCAGGAAGCATATTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR GCA 90 bp GCCATAGGGTATCTGGAGAAATGTACACAGGCAGCCTCAGCTGGAGTCATGCGATGGCAGCAGCCACTGTaGAGTTATAACAAAATTAGC +
Preference number: 4 (lower is better)
Translates to: AIGYLEKCTQAASAGVMRWQQPL*SYNKIS
Trigger: GCTAATTTTGTTATAACTGCACAGTGGCTGCTGCCA...TCGCATGACTCCAGCTGAGGCTGCCTGTGTACATTTCTCCAGATACCCTATGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR GCA 90 bp TGCTGTACAGGAGGAGCCAGTCTTCCAACAGTACACAAAAGCACGCTGTCCTCTGAACACCCCCATTTTTaGCATGAGCAGATCTGGATT +
Preference number: 4 (lower is better)
Translates to: CCTGGASLPTVHKSTLSSEHPHF*HEQIWI
Trigger: AATCCAGATCTGCTCATGGCAAAAATGGGGGTGTTC...AGAGGACAGCGTGCTTTTGTGTACTGTTGGAAGACTGGCTCCTCCTGTACAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp AGGAAGCAGCGGCAAGTAGATTGCTTCTCCCCAGATAGGTTTGTTTCACAATATAAGTGGCCGATCTTCTaGCCAAAGGCTTCCCTCACG +
Preference number: 4 (lower is better)
Translates to: RKQRQVDCFSPDRFVSQYKWPIF*PKASLT
Trigger: CGTGAGGGAAGCCTTTGGCCAGAAGATCGGCCACTT...ATATTGTGAAACAAACCTATCTGGGGAGAAGCAATCTACTTGCCGCTGCTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp GCCATAGGGTATCTGGAGAAATGTACACAGGCAGCCTCAGCTGGAGTCATGCGATGCCATGAGCAGATCTaGATTCTAGTTCGTTTTGAC +
Preference number: 4 (lower is better)
Translates to: AIGYLEKCTQAASAGVMRCHEQI*ILVRFD
Trigger: GTCAAAACGAACTAGAATCCAGATCTGCTCATGGCA...TCGCATGACTCCAGCTGAGGCTGCCTGTGTACATTTCTCCAGATACCCTATGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp CTGTGCTTGAGCAGAGAGATCTCCTTGCCAGAGCCTCACCCAAGAGAAAGAGGTTGCCATGAGCAGATCTaGATTCTAGTTCGTTTTGAC +
Preference number: 4 (lower is better)
Translates to: LCLSREISLPEPHPRERGCHEQI*ILVRFD
Trigger: GTCAAAACGAACTAGAATCCAGATCTGCTCATGGCA...ACCTCTTTCTCTTGGGTGAGGCTCTGGCAAGGAGATCTCTCTGCTCAAGCACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp GACAATATGCTTCCTGCTGAGTCCATTTTAAATCACACAACACTAGCCGTGGCAAGTGCGGCCCAAAGCTaGAATTCTCAGAACACCCCC +
Preference number: 4 (lower is better)
Translates to: DNMLPAESILNHTTLAVASAAQS*NSQNTP
Trigger: GGGGGTGTTCTGAGAATTCCAGCTTTGGGCCGCACT...TGCCACGGCTAGTGTTGTGTGATTTAAAATGGACTCAGCAGGAAGCATATTGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp GACAATATGCTTCCTGCTGAGTCCATTTTAAATCACACAACACTAGCCGTGGCAGGAACTCGGAAGGGGTaGAACAACCCAGACCCATTC +
Preference number: 4 (lower is better)
Translates to: DNMLPAESILNHTTLAVAGTRKG*NNPDPF
Trigger: GAATGGGTCTGGGTTGTTCCACCCCTTCCGAGTTCC...TGCCACGGCTAGTGTTGTGTGATTTAAAATGGACTCAGCAGGAAGCATATTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR TCA 90 bp TGGGAAAGGGAGGCTGAGACCTCTCTCCTAAGGGCTGATTTTACCTTCCTGTCCCAATATGCTTCCTGCTaGGTCCATTTTAAATCACAC +
Preference number: 4 (lower is better)
Translates to: WEREAETSLLRADFTFLSQYASC*VHFKSH
Trigger: GTGTGATTTAAAATGGACTCAGCAGGAAGCATATTG...GGACAGGAAGGTAAAATCAGCCCTTAGGAGAGAGGTCTCAGCCTCCCTTTCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR TCA 90 bp CTGTGCTTGAGCAGAGAGATCTCCTTGCCAGAGCCTCACCCAAGAGAAAGAGGTCCCCAGAAAAGAGACTaGAAGTTGAATTTGCCTTAT +
Preference number: 4 (lower is better)
Translates to: LCLSREISLPEPHPRERGPQKRD*KLNLPY
Trigger: ATAAGGCAAATTCAACTTTCAGTCTCTTTTCTGGGG...ACCTCTTTCTCTTGGGTGAGGCTCTGGCAAGGAGATCTCTCTGCTCAAGCACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR TCA 90 bp GGGTATCTGGAGAAATGTACACAGGCAGCCTCAGCTGGAGTCATGCGAGCCAACTTTTCTATTTTTAGTTaGGGCGAGGTTTCCACATGT +
Preference number: 4 (lower is better)
Translates to: GYLEKCTQAASAGVMRANFSIFS*GEVSTC
Trigger: ACATGTGGAAACCTCGCCTCAACTAAAAATAGAAAA...GTTGGCTCGCATGACTCCAGCTGAGGCTGCCTGTGTACATTTCTCCAGATACCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR TCA 90 bp CAACAATCCCCAGACAATATGCTTCCTGCTGAGTCCATTTTAAATCACACAACAACTCCTGACTGCAAGTaGTCCACCTGCCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: QQSPDNMLPAESILNHTTTPDCK*STCLGL
Trigger: GAGGCCAAGGCAGGTGGATCACTTGCAGTCAGGAGT...TGTTGTGTGATTTAAAATGGACTCAGCAGGAAGCATATTGTCTGGGGATTGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR GCA 90 bp TGCTGTACAGGAGGAGCCAGTCTTCCAACAGTACACAAAAGCACGCTGTCCTCTTGGCAGCAGCCACTGTaGAGTTATAACAAAATTAGC +
Preference number: 4 (lower is better)
Translates to: CCTGGASLPTVHKSTLSSWQQPL*SYNKIS
Trigger: GCTAATTTTGTTATAACTGCACAGTGGCTGCTGCCA...AGAGGACAGCGTGCTTTTGTGTACTGTTGGAAGACTGGCTCCTCCTGTACAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR GCA 90 bp AGCAAGATGGCCCTTTTAGTCACATTCATCTCCAACATAGCAGGGAGCAAGACAACACTCTATCCAGACTaGTGTACAGTGCGGCCCAAA +
Preference number: 4 (lower is better)
Translates to: SKMALLVTFISNIAGSKTTLYPD*CTVRPK
Trigger: TTTGGGCCGCACTGTACAGCAGTCTGGATAGAGTGT...TGTCTTGCTCCCTGCTATGTTGGAGATGAATGTGACTAAAAGGGCCATCTTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR GCA 90 bp GACAATATGCTTCCTGCTGAGTCCATTTTAAATCACACAACACTAGCCGTGGCAAGCCAGGATAGGTGCTaGTGGGCTGAGAACCAAGAA +
Preference number: 4 (lower is better)
Translates to: DNMLPAESILNHTTLAVASQDRC*WAENQE
Trigger: TTCTTGGTTCTCAGCCCAGCAGCACCTATCCTGGCT...TGCCACGGCTAGTGTTGTGTGATTTAAAATGGACTCAGCAGGAAGCATATTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp GACAATATGCTTCCTGCTGAGTCCATTTTAAATCACACAACACTAGCCGTGGCATGTTGGTCGTCAGGCTaGTCTCGAACTCCTGACCTT +
Preference number: 4 (lower is better)
Translates to: DNMLPAESILNHTTLAVACWSSG*SRTPDL
Trigger: AAGGTCAGGAGTTCGAGACCAGCCTGACGACCAACA...TGCCACGGCTAGTGTTGTGTGATTTAAAATGGACTCAGCAGGAAGCATATTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp CAGGGCTTAGACAGACTGGATGAAGCGCCCCATTTTGCCACATTGTCTCCAGGCATATTTAATACAAAATaGCAGCAGCCACTGTGCAGT +
Preference number: 4 (lower is better)
Translates to: QGLDRLDEAPHFATLSPGIFNTK*QQPLCS
Trigger: ACTGCACAGTGGCTGCTGCCATTTTGTATTAAATAT...GCCTGGAGACAATGTGGCAAAATGGGGCGCTTCATCCAGTCTGTCTAAGCCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp AGCAAGATGGCCCTTTTAGTCACATTCATCTCCAACATAGCAGGGAGCAAGACACAGGATAGGTGCTGCTaGGCTGAGAACCAAGAAAAC +
Preference number: 4 (lower is better)
Translates to: SKMALLVTFISNIAGSKTQDRCC*AENQEN
Trigger: GTTTTCTTGGTTCTCAGCCCAGCAGCACCTATCCTG...TGTCTTGCTCCCTGCTATGTTGGAGATGAATGTGACTAAAAGGGCCATCTTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp AGCAAGATGGCCCTTTTAGTCACATTCATCTCCAACATAGCAGGGAGCAAGACAACATTGTCTCCAGGCTaGTCTCTCCAGCCACACATT +
Preference number: 4 (lower is better)
Translates to: SKMALLVTFISNIAGSKTTLSPG*SLQPHI
Trigger: AATGTGTGGCTGGAGAGACCAGCCTGGAGACAATGT...TGTCTTGCTCCCTGCTATGTTGGAGATGAATGTGACTAAAAGGGCCATCTTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR TCA 90 bp CAACAATCCCCAGACAATATGCTTCCTGCTGAGTCCATTTTAAATCACACAACATGCGTACAAGCTGGTTaGTGCAGAGGTTGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: QQSPDNMLPAESILNHTTCVQAG*CRGWSG
Trigger: CCCACTCCAACCTCTGCATCAACCAGCTTGTACGCA...TGTTGTGTGATTTAAAATGGACTCAGCAGGAAGCATATTGTCTGGGGATTGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR TCA 90 bp TGCTGTACAGGAGGAGCCAGTCTTCCAACAGTACACAAAAGCACGCTGTCCTCTCAATATGCTTCCTGCTaGGTCCATTTTAAATCACAC +
Preference number: 4 (lower is better)
Translates to: CCTGGASLPTVHKSTLSSQYASC*VHFKSH
Trigger: GTGTGATTTAAAATGGACTCAGCAGGAAGCATATTG...AGAGGACAGCGTGCTTTTGTGTACTGTTGGAAGACTGGCTCCTCCTGTACAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR TCA 90 bp ACCCAGACCCATTCCCTTCTCAGATCACACTCTATCCAGACTGCTGTACAGTGCCCCCAGAAAAGAGACTaGAAGTTGAATTTGCCTTAT +
Preference number: 4 (lower is better)
Translates to: TQTHSLLRSHSIQTAVQCPQKRD*KLNLPY
Trigger: ATAAGGCAAATTCAACTTTCAGTCTCTTTTCTGGGG...GCACTGTACAGCAGTCTGGATAGAGTGTGATCTGAGAAGGGAATGGGTCTGGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR TCA 90 bp AGCAAGATGGCCCTTTTAGTCACATTCATCTCCAACATAGCAGGGAGCAAGACAATTCTCGCAGGTTCTTaGACTCATTGCTGCGATCGA +
Preference number: 4 (lower is better)
Translates to: SKMALLVTFISNIAGSKTILAGS*THCCDR
Trigger: TCGATCGCAGCAATGAGTTCAAGAACCTGCGAGAAT...TGTCTTGCTCCCTGCTATGTTGGAGATGAATGTGACTAAAAGGGCCATCTTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487418.8
ENST00000651168.1
CDS-3UTR GCA 90 bp AGGAAGCAGCGGCAAGTAGATTGCTTCTCCCCAGATAGGTTTGTTTCACAATATCAAAATTCCTGCCTCTaGTCCTCGCTTAGCCCATTG +
Preference number: 4 (lower is better)
Translates to: RKQRQVDCFSPDRFVSQYQNSCL*SSLSPL
Trigger: CAATGGGCTAAGCGAGGAGCAGAGGCAGGAATTTTG...ATATTGTGAAACAAACCTATCTGGGGAGAAGCAATCTACTTGCCGCTGCTTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000479013.7
ENST00000650656.1
CDS-3UTR GCA 90 bp AGCAAGATGGCCCTTTTAGTCACATTCATCTCCAACATAGCAGGGAGCAAGACAGGACTAGTGAAAGTCTaGATTGAAGGCTCTGCCGAT +
Preference number: 4 (lower is better)
Translates to: SKMALLVTFISNIAGSKTGLVKV*IEGSAD
Trigger: ATCGGCAGAGCCTTCAATGCAGACTTTCACTAGTCC...TGTCTTGCTCCCTGCTATGTTGGAGATGAATGTGACTAAAAGGGCCATCTTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR GCA 90 bp CAACAATCCCCAGACAATATGCTTCCTGCTGAGTCCATTTTAAATCACACAACAAGAAAGGCCACTAGGTaGAGGAAAAGGGGGCGAAGG +
Preference number: 4 (lower is better)
Translates to: QQSPDNMLPAESILNHTTRKATR*RKRGRR
Trigger: CCTTCGCCCCCTTTTCCTGCACCTAGTGGCCTTTCT...TGTTGTGTGATTTAAAATGGACTCAGCAGGAAGCATATTGTCTGGGGATTGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR GCA 90 bp CAACAATCCCCAGACAATATGCTTCCTGCTGAGTCCATTTTAAATCACACAACAACAAGGGCTCAGAGGTaGTGTACAGGAGGAGCCAGT +
Preference number: 4 (lower is better)
Translates to: QQSPDNMLPAESILNHTTTRAQR*CTGGAS
Trigger: ACTGGCTCCTCCTGTACAGCACCTCTGAGCCCTTGT...TGTTGTGTGATTTAAAATGGACTCAGCAGGAAGCATATTGTCTGGGGATTGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR GCA 90 bp GACAATATGCTTCCTGCTGAGTCCATTTTAAATCACACAACACTAGCCGTGGCAACACTCTATCCAGACTaGTGTACAGTGCGGCCCAAA +
Preference number: 4 (lower is better)
Translates to: DNMLPAESILNHTTLAVATLYPD*CTVRPK
Trigger: TTTGGGCCGCACTGTACAGCAGTCTGGATAGAGTGT...TGCCACGGCTAGTGTTGTGTGATTTAAAATGGACTCAGCAGGAAGCATATTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR GCA 90 bp CAACAATCCCCAGACAATATGCTTCCTGCTGAGTCCATTTTAAATCACACAACAATGAGCCCAGGATCTTaGCCTCAGGATGGGACGGAA +
Preference number: 4 (lower is better)
Translates to: QQSPDNMLPAESILNHTTMSPGS*PQDGTE
Trigger: TTCCGTCCCATCCTGAGGGCAAGATCCTGGGCTCAT...TGTTGTGTGATTTAAAATGGACTCAGCAGGAAGCATATTGTCTGGGGATTGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp CAAGACAAGGAAGTGAAAGGGACTGCCTATGAGCCCAGGATCTTGCCCTCAGGACTTATCCAAAATGCTTaGAACCACAAGTGTTTCAGA +
Preference number: 4 (lower is better)
Translates to: QDKEVKGTAYEPRILPSGLIQNA*NHKCFR
Trigger: TCTGAAACACTTGTGGTTCCAAGCATTTTGGATAAG...TCCTGAGGGCAAGATCCTGGGCTCATAGGCAGTCCCTTTCACTTCCTTGTCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp GGTATCTGGAGAAATGTACACAGGCAGCCTCAGCTGGAGTCATGCGAGCCAACTATATTTAATACAAAATaGCAGCAGCCACTGTGCAGT +
Preference number: 4 (lower is better)
Translates to: GIWRNVHRQPQLESCEPTIFNTK*QQPLCS
Trigger: ACTGCACAGTGGCTGCTGCCATTTTGTATTAAATAT...AGTTGGCTCGCATGACTCCAGCTGAGGCTGCCTGTGTACATTTCTCCAGATACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR TCA 90 bp AGGAAGCAGCGGCAAGTAGATTGCTTCTCCCCAGATAGGTTTGTTTCACAATATCCCCCATTTTTGCCATaGGCAGATCTGGATTCTAGT +
Preference number: 4 (lower is better)
Translates to: RKQRQVDCFSPDRFVSQYPPFLP*ADLDSS
Trigger: ACTAGAATCCAGATCTGCTCATGGCAAAAATGGGGG...ATATTGTGAAACAAACCTATCTGGGGAGAAGCAATCTACTTGCCGCTGCTTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR TCA 90 bp GACAATATGCTTCCTGCTGAGTCCATTTTAAATCACACAACACTAGCCGTGGCAATTCTCGCAGGTTCTTaGACTCATTGCTGCGATCGA +
Preference number: 4 (lower is better)
Translates to: DNMLPAESILNHTTLAVAILAGS*THCCDR
Trigger: TCGATCGCAGCAATGAGTTCAAGAACCTGCGAGAAT...TGCCACGGCTAGTGTTGTGTGATTTAAAATGGACTCAGCAGGAAGCATATTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487418.8
ENST00000651168.1
CDS-3UTR GCA 90 bp AGGAAGCAGCGGCAAGTAGATTGCTTCTCCCCAGATAGGTTTGTTTCACAATATCAGCGGCAAGTAGATTaGTTCTCCCCAGATAGGTTT +
Preference number: 4 (lower is better)
Translates to: RKQRQVDCFSPDRFVSQYQRQVD*FSPDRF
Trigger: AAACCTATCTGGGGAGAAGCAATCTACTTGCCGCTG...ATATTGTGAAACAAACCTATCTGGGGAGAAGCAATCTACTTGCCGCTGCTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR GCA 90 bp AGCAAGATGGCCCTTTTAGTCACATTCATCTCCAACATAGCAGGGAGCAAGACAGAACACCCCCATTTTTaGCATGAGCAGATCTGGATT +
Preference number: 4 (lower is better)
Translates to: SKMALLVTFISNIAGSKTEHPHF*HEQIWI
Trigger: AATCCAGATCTGCTCATGGCAAAAATGGGGGTGTTC...TGTCTTGCTCCCTGCTATGTTGGAGATGAATGTGACTAAAAGGGCCATCTTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR GCA 90 bp CAACAATCCCCAGACAATATGCTTCCTGCTGAGTCCATTTTAAATCACACAACAAGCCAGGATAGGTGCTaGTGGGCTGAGAACCAAGAA +
Preference number: 4 (lower is better)
Translates to: QQSPDNMLPAESILNHTTSQDRC*WAENQE
Trigger: TTCTTGGTTCTCAGCCCAGCAGCACCTATCCTGGCT...TGTTGTGTGATTTAAAATGGACTCAGCAGGAAGCATATTGTCTGGGGATTGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp AGGAAGCAGCGGCAAGTAGATTGCTTCTCCCCAGATAGGTTTGTTTCACAATATCTATCTCATACAGCTTaGCATCTCGAAGAAAGCGGC +
Preference number: 4 (lower is better)
Translates to: RKQRQVDCFSPDRFVSQYLSHTA*HLEESG
Trigger: GCCGCTTTCTTCGAGATGCCAAGCTGTATGAGATAG...ATATTGTGAAACAAACCTATCTGGGGAGAAGCAATCTACTTGCCGCTGCTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp GACAATATGCTTCCTGCTGAGTCCATTTTAAATCACACAACACTAGCCGTGGCACTATCTCATACAGCTTaGCATCTCGAAGAAAGCGGC +
Preference number: 4 (lower is better)
Translates to: DNMLPAESILNHTTLAVALSHTA*HLEESG
Trigger: GCCGCTTTCTTCGAGATGCCAAGCTGTATGAGATAG...TGCCACGGCTAGTGTTGTGTGATTTAAAATGGACTCAGCAGGAAGCATATTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp CAACAATCCCCAGACAATATGCTTCCTGCTGAGTCCATTTTAAATCACACAACATGTTGGTCGTCAGGCTaGTCTCGAACTCCTGACCTT +
Preference number: 4 (lower is better)
Translates to: QQSPDNMLPAESILNHTTCWSSG*SRTPDL
Trigger: AAGGTCAGGAGTTCGAGACCAGCCTGACGACCAACA...TGTTGTGTGATTTAAAATGGACTCAGCAGGAAGCATATTGTCTGGGGATTGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp AGCAAGATGGCCCTTTTAGTCACATTCATCTCCAACATAGCAGGGAGCAAGACATCCTTTAAAACTCACTaGGAGATCTGGGAAAGGGAG +
Preference number: 4 (lower is better)
Translates to: SKMALLVTFISNIAGSKTSFKTH*EIWERE
Trigger: CTCCCTTTCCCAGATCTCCCAGTGAGTTTTAAAGGA...TGTCTTGCTCCCTGCTATGTTGGAGATGAATGTGACTAAAAGGGCCATCTTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR TCA 90 bp CAACAATCCCCAGACAATATGCTTCCTGCTGAGTCCATTTTAAATCACACAACAAGCAAGACAAGGAAGTaGAAGGGACTGCCTATGAGC +
Preference number: 4 (lower is better)
Translates to: QQSPDNMLPAESILNHTTSKTRK*KGLPMS
Trigger: GCTCATAGGCAGTCCCTTTCACTTCCTTGTCTTGCT...TGTTGTGTGATTTAAAATGGACTCAGCAGGAAGCATATTGTCTGGGGATTGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR GCA 90 bp CAACAATCCCCAGACAATATGCTTCCTGCTGAGTCCATTTTAAATCACACAACATGCTTCCAAAATTCCTaGCTCTGCTCCTCGCTTAGC +
Preference number: 4 (lower is better)
Translates to: QQSPDNMLPAESILNHTTCFQNS*LCSSLS
Trigger: GCTAAGCGAGGAGCAGAGGCAGGAATTTTGGAAGCA...TGTTGTGTGATTTAAAATGGACTCAGCAGGAAGCATATTGTCTGGGGATTGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000479013.7
ENST00000650656.1
CDS-3UTR CCA 90 bp CAACAATCCCCAGACAATATGCTTCCTGCTGAGTCCATTTTAAATCACACAACACCTCATCGCAGGCCTTaGCGACATTGTAGACATACT +
Preference number: 4 (lower is better)
Translates to: QQSPDNMLPAESILNHTTPHRRP*RHCRHT
Trigger: AGTATGTCTACAATGTCGCCAAGGCCTGCGATGAGG...TGTTGTGTGATTTAAAATGGACTCAGCAGGAAGCATATTGTCTGGGGATTGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp CAACAATCCCCAGACAATATGCTTCCTGCTGAGTCCATTTTAAATCACACAACAAGTCTTCTGTGTAACTaGGATTACAGGCGCGTGCCA +
Preference number: 4 (lower is better)
Translates to: QQSPDNMLPAESILNHTTSLLCN*DYRRVP
Trigger: TGGCACGCGCCTGTAATCCCAGTTACACAGAAGACT...TGTTGTGTGATTTAAAATGGACTCAGCAGGAAGCATATTGTCTGGGGATTGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp CAACAATCCCCAGACAATATGCTTCCTGCTGAGTCCATTTTAAATCACACAACACATGAAAGAACGGGCTaGAGGACAGGAATAGGACCT +
Preference number: 4 (lower is better)
Translates to: QQSPDNMLPAESILNHTTHERTG*RTGIGP
Trigger: AGGTCCTATTCCTGTCCTCCAGCCCGTTCTTTCATG...TGTTGTGTGATTTAAAATGGACTCAGCAGGAAGCATATTGTCTGGGGATTGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp GACAATATGCTTCCTGCTGAGTCCATTTTAAATCACACAACACTAGCCGTGGCATCCTTTAAAACTCACTaGGAGATCTGGGAAAGGGAG +
Preference number: 4 (lower is better)
Translates to: DNMLPAESILNHTTLAVASFKTH*EIWERE
Trigger: CTCCCTTTCCCAGATCTCCCAGTGAGTTTTAAAGGA...TGCCACGGCTAGTGTTGTGTGATTTAAAATGGACTCAGCAGGAAGCATATTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR TCA 90 bp CAACAATCCCCAGACAATATGCTTCCTGCTGAGTCCATTTTAAATCACACAACACCCCCATTTTTGCCATaGGCAGATCTGGATTCTAGT +
Preference number: 4 (lower is better)
Translates to: QQSPDNMLPAESILNHTTPPFLP*ADLDSS
Trigger: ACTAGAATCCAGATCTGCTCATGGCAAAAATGGGGG...TGTTGTGTGATTTAAAATGGACTCAGCAGGAAGCATATTGTCTGGGGATTGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR GCA 90 bp CAACAATCCCCAGACAATATGCTTCCTGCTGAGTCCATTTTAAATCACACAACAGGACTAGTGAAAGTCTaGATTGAAGGCTCTGCCGAT +
Preference number: 4 (lower is better)
Translates to: QQSPDNMLPAESILNHTTGLVKV*IEGSAD
Trigger: ATCGGCAGAGCCTTCAATGCAGACTTTCACTAGTCC...TGTTGTGTGATTTAAAATGGACTCAGCAGGAAGCATATTGTCTGGGGATTGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp AGGAAGCAGCGGCAAGTAGATTGCTTCTCCCCAGATAGGTTTGTTTCACAATATTGCCATGAGCAGATCTaGATTCTAGTTCGTTTTGAC +
Preference number: 4 (lower is better)
Translates to: RKQRQVDCFSPDRFVSQYCHEQI*ILVRFD
Trigger: GTCAAAACGAACTAGAATCCAGATCTGCTCATGGCA...ATATTGTGAAACAAACCTATCTGGGGAGAAGCAATCTACTTGCCGCTGCTTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR TCA 90 bp GACAATATGCTTCCTGCTGAGTCCATTTTAAATCACACAACACTAGCCGTGGCACCCCAGAAAAGAGACTaGAAGTTGAATTTGCCTTAT +
Preference number: 4 (lower is better)
Translates to: DNMLPAESILNHTTLAVAPQKRD*KLNLPY
Trigger: ATAAGGCAAATTCAACTTTCAGTCTCTTTTCTGGGG...TGCCACGGCTAGTGTTGTGTGATTTAAAATGGACTCAGCAGGAAGCATATTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp AGCAAGATGGCCCTTTTAGTCACATTCATCTCCAACATAGCAGGGAGCAAGACAATATTTAATACAAAATaGCAGCAGCCACTGTGCAGT +
Preference number: 4 (lower is better)
Translates to: SKMALLVTFISNIAGSKTIFNTK*QQPLCS
Trigger: ACTGCACAGTGGCTGCTGCCATTTTGTATTAAATAT...TGTCTTGCTCCCTGCTATGTTGGAGATGAATGTGACTAAAAGGGCCATCTTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR TCA 90 bp GACAATATGCTTCCTGCTGAGTCCATTTTAAATCACACAACACTAGCCGTGGCATTTTCTATTTTTAGTTaGGGCGAGGTTTCCACATGT +
Preference number: 4 (lower is better)
Translates to: DNMLPAESILNHTTLAVAFSIFS*GEVSTC
Trigger: ACATGTGGAAACCTCGCCTCAACTAAAAATAGAAAA...TGCCACGGCTAGTGTTGTGTGATTTAAAATGGACTCAGCAGGAAGCATATTGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR GCA 90 bp CAACAATCCCCAGACAATATGCTTCCTGCTGAGTCCATTTTAAATCACACAACATGGCAGCAGCCACTGTaGAGTTATAACAAAATTAGC +
Preference number: 4 (lower is better)
Translates to: QQSPDNMLPAESILNHTTWQQPL*SYNKIS
Trigger: GCTAATTTTGTTATAACTGCACAGTGGCTGCTGCCA...TGTTGTGTGATTTAAAATGGACTCAGCAGGAAGCATATTGTCTGGGGATTGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CCA 90 bp AGGAAGCAGCGGCAAGTAGATTGCTTCTCCCCAGATAGGTTTGTTTCACAATATCTTATCCAAAATGCTTaGAACCACAAGTGTTTCAGA +
Preference number: 4 (lower is better)
Translates to: RKQRQVDCFSPDRFVSQYLIQNA*NHKCFR
Trigger: TCTGAAACACTTGTGGTTCCAAGCATTTTGGATAAG...ATATTGTGAAACAAACCTATCTGGGGAGAAGCAATCTACTTGCCGCTGCTTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS CCA 90 bp GTCTCAAATCTTCACTCCACAGACGTGAGGCCGAGGTCAGAGGACTaGACCCGAGGTCGGAGGCCCCGCGTCCCGCCCCCGCGCTGGCGC +
Preference number: 5 (lower is better)
Translates to: VSNLHSTDVRPRSED*TRGRRPRVPPPRWR
Trigger: GCGCCAGCGCGGGGGCGGGACGCGGGGCCTCCGACCTCGGGTCCAGTCCTCTGACCTCGGCCTCACGTCTGTGGAGTGAAGATTTGAGAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558610.5
CDS CCA 90 bp GCTCCACCAATCCAGGCTTCGCCGCCCACCAAACCGGCTAGGGGGTaGGCTGCAGCAGCCAATCACCCTAGGCGGCCCGCCGAAGGCGTT +
Preference number: 5 (lower is better)
Translates to: APPIQASPPTKPARG*AAAANHPRRPAEGV
Trigger: AACGCCTTCGGCGGGCCGCCTAGGGTGATTGGCTGCTGCAGCCCACCCCCTAGCCGGTTTGGTGGGCGGCGAAGCCTGGATTGGTGGAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000650656.1
ENST00000651168.1
CDS TCA 90 bp CCGAAGGCGTTGCTGCCCTTGGACCGCACCCGAGCCAATCAACCGTaGTCGCCTGCCAGCTTCCAGCCAGTGCAACGGCCGCAGGCCGAG +
Preference number: 5 (lower is better)
Translates to: PKALLPLDRTRANQP*SPASFQPVQRPQAE
Trigger: CTCGGCCTGCGGCCGTTGCACTGGCTGGAAGCTGGCAGGCGATCACGGTTGATTGGCTCGGGTGCGGTCCAAGGGCAGCAACGCCTTCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650656.1
ENST00000651168.1
CDS GCA 90 bp GTTGCTGCCCTTGGACCGCACCCGAGCCAATCAACCGTGATCGCCTaGCAGCTTCCAGCCAGTGCAACGGCCGCAGGCCGAGTGGCCCTG +
Preference number: 5 (lower is better)
Translates to: VAALGPHPSQSTVIA*QLPASATAAGRVAL
Trigger: CAGGGCCACTCGGCCTGCGGCCGTTGCACTGGCTGGAAGCTGGCAGGCGATCACGGTTGATTGGCTCGGGTGCGGTCCAAGGGCAGCAAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650656.1
ENST00000651168.1
CDS CCA 90 bp AGCCCATTGATTGCATCGTCCACGGGCAAAAGCGAGTGGGCCCGCTaGGAAACGAAGCCGGCAAGCGGCGGCCGCAGCCTCCAGCTCGCC +
Preference number: 5 (lower is better)
Translates to: SPLIASSTGKSEWAR*ETKPASGGRSLQLA
Trigger: GGCGAGCTGGAGGCTGCGGCCGCCGCTTGCCGGCTTCGTTTCCCAGCGGGCCCACTCGCTTTTGCCCGTGGACGATGCAATCAATGGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000610693.5
ENST00000650656.1
ENST00000651168.1
CDS GCA 90 bp GCACCCGAGCCAATCAACCGTGATCGCCTGCCAGCTTCCAGCCAGTaGAACGGCCGCAGGCCGAGTGGCCCTGCCCCGAACGCTGCAAAT +
Preference number: 5 (lower is better)
Translates to: APEPINRDRLPASSQ*NGRRPSGPAPNAAN
Trigger: ATTTGCAGCGTTCGGGGCAGGGCCACTCGGCCTGCGGCCGTTGCACTGGCTGGAAGCTGGCAGGCGATCACGGTTGATTGGCTCGGGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650656.1
ENST00000651168.1
CDS CCA 90 bp TCCTCGCTTAGCCCATTGATTGCATCGTCCACGGGCAAAAGCGAGTaGGCCCGCTGGGAAACGAAGCCGGCAAGCGGCGGCCGCAGCCTC +
Preference number: 5 (lower is better)
Translates to: SSLSPLIASSTGKSE*ARWETKPASGGRSL
Trigger: GAGGCTGCGGCCGCCGCTTGCCGGCTTCGTTTCCCAGCGGGCCCACTCGCTTTTGCCCGTGGACGATGCAATCAATGGGCTAAGCGAGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000610693.5
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CAA 90 bp CACACGGCCAGGACTGGATGGTGCCCGTGGCAGGGCGGTGCACAAGGGCTCAGACCCCTCATCCCCAGCTaGTCCAGCTTCTTAGAGGTG +
Preference number: 5 (lower is better)
Translates to: HTARTGWCPWQGGAQGLRPLIPS*SSFLEV
Trigger: CACCTCTAAGAAGCTGGACAAGCTGGGGATGAGGGG...TCTGAGCCCTTGTGCACCGCCCTGCCACGGGCACCATCCAGTCCTGGCCGTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CAA 90 bp CACACGGCCAGGACTGGATGGTGCCCGTGGCAGGGCGGTGCACAAGGGCTCAGATATGAGCCCAGGATCTaGCCCTCAGGATGGGACGGA +
Preference number: 5 (lower is better)
Translates to: HTARTGWCPWQGGAQGLRYEPRI*PSGWDG
Trigger: TCCGTCCCATCCTGAGGGCAAGATCCTGGGCTCATA...TCTGAGCCCTTGTGCACCGCCCTGCCACGGGCACCATCCAGTCCTGGCCGTGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS TCA 90 bp TCCAGCAGTACTGTCCCACGGTCTCAAATCTTCACTCCACAGACGTaGGGCCGAGGTCAGAGGACTGGACCCGAGGTCGGAGGCCCCGCG +
Preference number: 5 (lower is better)
Translates to: SSSTVPRSQIFTPQT*GRGQRTGPEVGGPA
Trigger: CGCGGGGCCTCCGACCTCGGGTCCAGTCCTCTGACCTCGGCCTCACGTCTGTGGAGTGAAGATTTGAGACCGTGGGACAGTACTGCTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558610.5
CDS TCA 90 bp GACTGCCCCCGACTGCCCGGACCTCCCAACTCACTCGCAGGTTCTTaGACTCATTGCTGCGATCGATCTCCTGGGCCTTGGGGGCCAGGT +
Preference number: 5 (lower is better)
Translates to: DCPRLPGPPNSLAGS*THCCDRSPGPWGPG
Trigger: ACCTGGCCCCCAAGGCCCAGGAGATCGATCGCAGCAATGAGTTCAAGAACCTGCGAGTGAGTTGGGAGGTCCGGGCAGTCGGGGGCAGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000610693.5
CDS GCA 90 bp CCAGGCAGCAGTGCAGCTCAGCCCCACTCCCTGACTGCCCCCGACTaGCCGGACCTCCCAACTCACTCGCAGGTTCTTGAACTCATTGCT +
Preference number: 5 (lower is better)
Translates to: PGSSAAQPHSLTAPD*PDLPTHSQVLELIA
Trigger: AGCAATGAGTTCAAGAACCTGCGAGTGAGTTGGGAGGTCCGGGCAGTCGGGGGCAGTCAGGGAGTGGGGCTGAGCTGCACTGCTGCCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610693.5
CDS CCA 90 bp CTGCTCCAGGGACGTCTGACCTCGGGTCTCGCCCTCCCTCCCAGGTaGGTGTTGGGCGGAAAAGGTCTGCCCTTCATTATTGCCCCAGGA +
Preference number: 5 (lower is better)
Translates to: LLQGRLTSGLALPPR*VLGGKGLPFIIAPG
Trigger: TCCTGGGGCAATAATGAAGGGCAGACCTTTTCCGCCCAACACCCACCTGGGAGGGAGGGCGAGACCCGAGGTCAGACGTCCCTGGAGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473112.6
CDS-3UTR CAA 90 bp CACACGGCCAGGACTGGATGGTGCCCGTGGCAGGGCGGTGCACAAGGGCTCAGATCATGGCCCAGGATGTaGGCAGCAGGAATCTTGCAG +
Preference number: 5 (lower is better)
Translates to: HTARTGWCPWQGGAQGLRSWPRM*AAGILQ
Trigger: CTGCAAGATTCCTGCTGCCAACATCCTGGGCCATGA...TCTGAGCCCTTGTGCACCGCCCTGCCACGGGCACCATCCAGTCCTGGCCGTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CAA 90 bp GGGTATCTGGAGAAATGTACACAGGCAGCCTCAGCTGGAGTCATGCGAGCCAACGGCCCGCCGAAGGCGTaGCTGCCCTTGGACCGCACC +
Preference number: 5 (lower is better)
Translates to: GYLEKCTQAASAGVMRANGPPKA*LPLDRT
Trigger: GGTGCGGTCCAAGGGCAGCAACGCCTTCGGCGGGCC...GTTGGCTCGCATGACTCCAGCTGAGGCTGCCTGTGTACATTTCTCCAGATACCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650656.1
ENST00000651168.1
CDS CCA 90 bp GAGAAAGGCCCCGTGGGCACCTCCTCATCCCACCACCGGGTGTGGTaGCAAAATGCTAGCGTGGGAAGGCCAGAATCCCAGGGAGGAGAA +
Preference number: 5 (lower is better)
Translates to: EKGPVGTSSSHHRVW*QNASVGRPESQGGE
Trigger: TTCTCCTCCCTGGGATTCTGGCCTTCCCACGCTAGCATTTTGCCACCACACCCGGTGGTGGGATGAGGAGGTGCCCACGGGGCCTTTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497816.1
CDS CCA 90 bp AAGGAGAAAGGCCCCGTGGGCACCTCCTCATCCCACCACCGGGTGTaGTGGCAAAATGCTAGCGTGGGAAGGCCAGAATCCCAGGGAGGA +
Preference number: 5 (lower is better)
Translates to: KEKGPVGTSSSHHRV*WQNASVGRPESQGG
Trigger: TCCTCCCTGGGATTCTGGCCTTCCCACGCTAGCATTTTGCCACCACACCCGGTGGTGGGATGAGGAGGTGCCCACGGGGCCTTTCTCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497816.1
CDS-3UTR CAA 90 bp TGCTGTGGGCAGGGTGGGAAAGCCGCCACATCTCTACTTCCCAAGAAAGGCCACGGGACGGAACTGGGGTaGGTGAGGAGCCAACCCCAC +
Preference number: 5 (lower is better)
Translates to: CCGQGGKAATSLLPKKGHGTELG*VRSQPH
Trigger: GTGGGGTTGGCTCCTCACCAACCCCAGTTCCGTCCC...GTGGCCTTTCTTGGGAAGTAGAGATGTGGCGGCTTTCCCACCCTGCCCACAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS TCA 90 bp CCCTCACGTGCAGGTAGGGAATGGTGTGGTCCAGGACCGCTTGCATaGGCCTGTCAGAAAGGAGAAAGGCCCCGTGGGCACCTCCTCATC +
Preference number: 5 (lower is better)
Translates to: PSRAGREWCGPGPLA*ACQKGERPRGHLLI
Trigger: GATGAGGAGGTGCCCACGGGGCCTTTCTCCTTTCTGACAGGCTCATGCAAGCGGTCCTGGACCACACCATTCCCTACCTGCACGTGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497816.1
CDS-3UTR CAA 90 bp GAGGCGGGTGTACATGTCAGCCATCTTCCCCTGCATCAACTGGAAGTGGCCGATCCTCCCAGGTGGGTGTaGGGCGGAAAAGGTCTGCCC +
Preference number: 5 (lower is better)
Translates to: EAGVHVSHLPLHQLEVADPPRWV*GGKGLP
Trigger: GGGCAGACCTTTTCCGCCCAACACCCACCTGGGAGG...ATCGGCCACTTCCAGTTGATGCAGGGGAAGATGGCTGACATGTACACCCGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481262.6
CDS-3UTR CAA 90 bp GGGCCACCTAAGCTTTGTAAACCCTGCCAAGGAGCTCTGTCCCAAAGACGTTGGGATCCAAGAGGCGAGTaGGGGGAGCAGCACGCGGGG +
Preference number: 5 (lower is better)
Translates to: GPPKLCKPCQGALSQRRWDPRGE*GEQHAG
Trigger: CCCCGCGTGCTGCTCCCCCAACTCGCCTCTTGGATC...CCAACGTCTTTGGGACAGAGCTCCTTGGCAGGGTTTACAAAGCTTAGGTGGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000481262.6
ENST00000491554.6
CDS-3UTR CAA 90 bp CACACGGCCAGGACTGGATGGTGCCCGTGGCAGGGCGGTGCACAAGGGCTCAGACCTATCTCATACAGCTaGGCATCTCGAAGAAAGCGG +
Preference number: 5 (lower is better)
Translates to: HTARTGWCPWQGGAQGLRPISYS*ASRRKR
Trigger: CCGCTTTCTTCGAGATGCCAAGCTGTATGAGATAGG...TCTGAGCCCTTGTGCACCGCCCTGCCACGGGCACCATCCAGTCCTGGCCGTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS CCA 90 bp TCCAGGACCGCTTGCATGAGCCTGTCAGAAAGGAGAAAGGCCCCGTaGGCACCTCCTCATCCCACCACCGGGTGTGGTGGCAAAATGCTA +
Preference number: 5 (lower is better)
Translates to: SRTACMSLSERRKAP*APPHPTTGCGGKML
Trigger: TAGCATTTTGCCACCACACCCGGTGGTGGGATGAGGAGGTGCCCACGGGGCCTTTCTCCTTTCTGACAGGCTCATGCAAGCGGTCCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497816.1
CDS-3UTR CAA 90 bp GGTGCGGGGACGTTCCAAGAAGGGGCTAAGCCGAGAGCGGAGCCTGAAGGAGCAAGTGTAGAGGAAGGGTaGAGGGGCATGGCCAAAACA +
Preference number: 5 (lower is better)
Translates to: GAGTFQEGAKPRAEPEGASVEEG*RGMAKT
Trigger: TGTTTTGGCCATGCCCCTCAACCCTTCCTCTACACT...TGCTCCTTCAGGCTCCGCTCTCGGCTTAGCCCCTTCTTGGAACGTCCCCGCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000491554.6
CDS-3UTR CAA 90 bp TTCAGCAAAGGTGCAGAGCTGTGGTATAGGGGTGAGGCAGCAGATGAGGCTGGAGTGGTCCAGGACCGCTaGCATGAGCCCAAGAGGCCC +
Preference number: 5 (lower is better)
Translates to: FSKGAELWYRGEAADEAGVVQDR*HEPKRP
Trigger: GGGCCTCTTGGGCTCATGCAAGCGGTCCTGGACCAC...TCCAGCCTCATCTGCTGCCTCACCCCTATACCACAGCTCTGCACCTTTGCTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491554.6
CDS-3UTR CAA 90 bp CACACGGCCAGGACTGGATGGTGCCCGTGGCAGGGCGGTGCACAAGGGCTCAGAAATTCTCGCAGGTTCTaGAACTCATTGCTGCGATCG +
Preference number: 5 (lower is better)
Translates to: HTARTGWCPWQGGAQGLRNSRRF*NSLLRS
Trigger: CGATCGCAGCAATGAGTTCAAGAACCTGCGAGAATT...TCTGAGCCCTTGTGCACCGCCCTGCCACGGGCACCATCCAGTCCTGGCCGTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000487418.8
ENST00000651168.1
CDS GCA 90 bp CTGGTTGATGCAGAGGTTGGAGTGGGCACCGTAACTGAGCCCCACTaGTCCGGAAGCTCGGGATATCTCCTCCATCACCAGCACATGCTC +
Preference number: 5 (lower is better)
Translates to: LVDAEVGVGTVTEPH*SGSSGYLLHHQHML
Trigger: GAGCATGTGCTGGTGATGGAGGAGATATCCCGAGCTTCCGGAGCAGTGGGGCTCAGTTACGGTGCCCACTCCAACCTCTGCATCAACCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000473112.6
ENST00000479013.7
ENST00000487418.8
ENST00000558610.5
ENST00000610693.5
ENST00000650656.1
ENST00000651168.1
CDS GCA 90 bp AGGTGCAGGAAAAGGGGGCGAAGGGTCTCAGGACTAGTGAAAGTCTaGATTGAAGGCTCTGCCGATGACCAGCCGCCTCACCTCGCTGGT +
Preference number: 5 (lower is better)
Translates to: RCRKRGRRVSGLVKV*IEGSADDQPPHLAG
Trigger: ACCAGCGAGGTGAGGCGGCTGGTCATCGGCAGAGCCTTCAATGCAGACTTTCACTAGTCCTGAGACCCTTCGCCCCCTTTTCCTGCACCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000497816.1
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CAA 90 bp GGAAAGGAAGCTTCTGGTCTGAGATCCAAGAGGCGAGTTGGGGGAGCAGCACGCCCCCTCATCCCCAGCTaGTCCAGCTTCTTAGAGGTG +
Preference number: 5 (lower is better)
Translates to: GKEASGLRSKRRVGGAARPLIPS*SSFLEV
Trigger: CACCTCTAAGAAGCTGGACAAGCTGGGGATGAGGGG...GCGTGCTGCTCCCCCAACTCGCCTCTTGGATCTCAGACCAGAAGCTTCCTTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000481262.6
ENST00000491554.6
CDS-3UTR CAA 90 bp GGTATCTGGAGAAATGTACACAGGCAGCCTCAGCTGGAGTCATGCGAGCCAACTGTGGTCCAGGACCGCTaGCATGAGCCCAAGAGGCCC +
Preference number: 5 (lower is better)
Translates to: GIWRNVHRQPQLESCEPTVVQDR*HEPKRP
Trigger: GGGCCTCTTGGGCTCATGCAAGCGGTCCTGGACCAC...AGTTGGCTCGCATGACTCCAGCTGAGGCTGCCTGTGTACATTTCTCCAGATACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CAA 90 bp CTGTGCTTGAGCAGAGAGATCTCCTTGCCAGAGCCTCACCCAAGAGAAAGAGGTGTGGTCCAGGACCGCTaGCATGAGCCCAAGAGGCCC +
Preference number: 5 (lower is better)
Translates to: LCLSREISLPEPHPRERGVVQDR*HEPKRP
Trigger: GGGCCTCTTGGGCTCATGCAAGCGGTCCTGGACCAC...ACCTCTTTCTCTTGGGTGAGGCTCTGGCAAGGAGATCTCTCTGCTCAAGCACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CAA 90 bp TTCAGCAAAGGTGCAGAGCTGTGGTATAGGGGTGAGGCAGCAGATGAGGCTGGACCTCCCAGGTGGGTGTaGGGCGGAAAAGGTCTGCCA +
Preference number: 5 (lower is better)
Translates to: FSKGAELWYRGEAADEAGPPRWV*GGKGLP
Trigger: TGGCAGACCTTTTCCGCCCAACACCCACCTGGGAGG...TCCAGCCTCATCTGCTGCCTCACCCCTATACCACAGCTCTGCACCTTTGCTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491554.6
CDS-3UTR CAA 90 bp GGGTATCTGGAGAAATGTACACAGGCAGCCTCAGCTGGAGTCATGCGAGCCAACAAGGCGTTGCTGCCCTaGGACCGCACCCGAGCCAAT +
Preference number: 5 (lower is better)
Translates to: GYLEKCTQAASAGVMRANKALLP*DRTRAN
Trigger: ATTGGCTCGGGTGCGGTCCAAGGGCAGCAACGCCTT...GTTGGCTCGCATGACTCCAGCTGAGGCTGCCTGTGTACATTTCTCCAGATACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650656.1
ENST00000651168.1
CDS GCA 90 bp ACTTCAGAAAGTCTTGCCACAGTTACGGCACTGACTGGCCAGAGGTaGAGGGGCGTGACAGCCCAGGTGTCGTTTCACAGCCGAGTAAGC +
Preference number: 5 (lower is better)
Translates to: TSESLATVTALTGQR*RGVTAQVSFHSRVS
Trigger: GCTTACTCGGCTGTGAAACGACACCTGGGCTGTCACGCCCCTGCACCTCTGGCCAGTCAGTGCCGTAACTGTGGCAAGACTTTCTGAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497816.1
CDS-3UTR CAA 90 bp AAGCCGAGAGCGGAGCCTGAAGGAGCAGGCACTCTTCGGGCAGGCTGCCATAGGGAATTTGCGGGGAGCTaGATAGTTCACTGGTTCAGT +
Preference number: 5 (lower is better)
Translates to: KPRAEPEGAGTLRAGCHREFAGS*IVHWFS
Trigger: ACTGAACCAGTGAACTATCAAGCTCCCCGCAAATTC...CCTATGGCAGCCTGCCCGAAGAGTGCCTGCTCCTTCAGGCTCCGCTCTCGGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491554.6
CDS-3UTR CAA 90 bp ACCCAGACCCATTCCCTTCTCAGATCACACTCTATCCAGACTGCTGTACAGTGCGTGGTCCAGGACCGCTaGCATGAGCCCAAGAGGCCC +
Preference number: 5 (lower is better)
Translates to: TQTHSLLRSHSIQTAVQCVVQDR*HEPKRP
Trigger: GGGCCTCTTGGGCTCATGCAAGCGGTCCTGGACCAC...GCACTGTACAGCAGTCTGGATAGAGTGTGATCTGAGAAGGGAATGGGTCTGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CAA 90 bp CCTGCCAAGGAGCTCTGTCCCAAAGACGTTGGAGAACATAGAAGGATTTTGAGGGATCCAAGAGGCGAGTaGGGGGAGCAGCACGCGGGG +
Preference number: 5 (lower is better)
Translates to: PAKELCPKDVGEHRRILRDPRGE*GEQHAG
Trigger: CCCCGCGTGCTGCTCCCCCAACTCGCCTCTTGGATC...CCTCAAAATCCTTCTATGTTCTCCAACGTCTTTGGGACAGAGCTCCTTGGCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000481262.6
ENST00000491554.6
CDS-3UTR CAA 90 bp ACCCAGACCCATTCCCTTCTCAGATCACACTCTATCCAGACTGCTGTACAGTGCGGGACGGAACTGGGGTaGGTGAGGAGCCAACCCCAC +
Preference number: 5 (lower is better)
Translates to: TQTHSLLRSHSIQTAVQCGTELG*VRSQPH
Trigger: GTGGGGTTGGCTCCTCACCAACCCCAGTTCCGTCCC...GCACTGTACAGCAGTCTGGATAGAGTGTGATCTGAGAAGGGAATGGGTCTGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CAA 90 bp TGCTGTGGGCAGGGTGGGAAAGCCGCCACATCTCTACTTCCCAAGAAAGGCCACCCCCATTTTGCCACATaGTCTCCAGGCTGGTCTCTC +
Preference number: 5 (lower is better)
Translates to: CCGQGGKAATSLLPKKGHPHFAT*SPGWSL
Trigger: GAGAGACCAGCCTGGAGACAATGTGGCAAAATGGGG...GTGGCCTTTCTTGGGAAGTAGAGATGTGGCGGCTTTCCCACCCTGCCCACAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS GCA 90 bp GAAGGCCAGAATCCCAGGGAGGAGAAAAGCAACTTCAGAAAGTCTTaGCACAGTTACGGCACTGACTGGCCAGAGGTGCAGGGGCGTGAC +
Preference number: 5 (lower is better)
Translates to: EGQNPREEKSNFRKS*HSYGTDWPEVQGRD
Trigger: GTCACGCCCCTGCACCTCTGGCCAGTCAGTGCCGTAACTGTGGCAAGACTTTCTGAAGTTGCTTTTCTCCTCCCTGGGATTCTGGCCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497816.1
CDS-3UTR CAA 90 bp AGGACACCCCAAGCGCCGAGTACCAGTTTCAGCAAAGGTGCAGAGCTGTGGTATCCCCTCATCCCCAGCTaGTCCAGCTTCTTAGAGGTG +
Preference number: 5 (lower is better)
Translates to: RTPQAPSTSFSKGAELWYPLIPS*SSFLEV
Trigger: CACCTCTAAGAAGCTGGACAAGCTGGGGATGAGGGG...ATACCACAGCTCTGCACCTTTGCTGAAACTGGTACTCGGCGCTTGGGGTGTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000481262.6
ENST00000491554.6
CDS-3UTR CAA 90 bp CGCCGAGTACCAGTTTCAGCAAAGGTGCAGAGCTGTGGTATAGGGGTGAGGCAGTCATGGCCCAGGATGTaGGCAGCAGGAATCTTGCAG +
Preference number: 5 (lower is better)
Translates to: RRVPVSAKVQSCGIGVRQSWPRM*AAGILQ
Trigger: CTGCAAGATTCCTGCTGCCAACATCCTGGGCCATGA...CTGCCTCACCCCTATACCACAGCTCTGCACCTTTGCTGAAACTGGTACTCGGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491554.6
CDS-3UTR CAA 90 bp TGCTGTGGGCAGGGTGGGAAAGCCGCCACATCTCTACTTCCCAAGAAAGGCCACATGAAGCGCCCCATTTaGCCACATTGTCTCCAGGCT +
Preference number: 5 (lower is better)
Translates to: CCGQGGKAATSLLPKKGHMKRPI*PHCLQA
Trigger: AGCCTGGAGACAATGTGGCAAAATGGGGCGCTTCAT...GTGGCCTTTCTTGGGAAGTAGAGATGTGGCGGCTTTCCCACCCTGCCCACAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS GCA 90 bp GTGGGAAAGCCGCCACATCTCTACTTCCCAAGAAAGGCCACTAGGTaGAGGAAAAGGGGGCGAAGGGTCTCAGGACTAGTGAAAGTCTGC +
Preference number: 5 (lower is better)
Translates to: VGKPPHLYFPRKATR*RKRGRRVSGLVKVC
Trigger: GCAGACTTTCACTAGTCCTGAGACCCTTCGCCCCCTTTTCCTGCACCTAGTGGCCTTTCTTGGGAAGTAGAGATGTGGCGGCTTTCCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000497816.1
ENST00000650656.1
ENST00000651168.1
CDS GCA 90 bp CTCTTTCCCCCAGGTGGAGTCAGCTCTGGTCCAATGTCACCTCCCTaGAGAGTAGTCCGTGAAAGCTTCTTTGTCCAGGAGACAGGCCAT +
Preference number: 5 (lower is better)
Translates to: LFPPGGVSSGPMSPP*RVVRESFFVQETGH
Trigger: ATGGCCTGTCTCCTGGACAAAGAAGCTTTCACGGACTACTCTGCAGGGAGGTGACATTGGACCAGAGCTGACTCCACCTGGGGGAAAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560660.1
CDS CCA 90 bp GAGAAAAGCAACTTCAGAAAGTCTTGCCACAGTTACGGCACTGACTaGCCAGAGGTGCAGGGGCGTGACAGCCCAGGTGTCGTTTCACAG +
Preference number: 5 (lower is better)
Translates to: EKSNFRKSCHSYGTD*PEVQGRDSPGVVSQ
Trigger: CTGTGAAACGACACCTGGGCTGTCACGCCCCTGCACCTCTGGCCAGTCAGTGCCGTAACTGTGGCAAGACTTTCTGAAGTTGCTTTTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497816.1
CDS-3UTR CAA 90 bp GGGTATCTGGAGAAATGTACACAGGCAGCCTCAGCTGGAGTCATGCGAGCCAACTCATGGCCCAGGATGTaGGCAGCAGGAATCTTGCAG +
Preference number: 5 (lower is better)
Translates to: GYLEKCTQAASAGVMRANSWPRM*AAGILQ
Trigger: CTGCAAGATTCCTGCTGCCAACATCCTGGGCCATGA...GTTGGCTCGCATGACTCCAGCTGAGGCTGCCTGTGTACATTTCTCCAGATACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CAA 90 bp TGGGTAGGGCCACCTAAGCTTTGTAAACCCTGCCAAGGAGCTCTGTCCCAAAGAGTGGTCCAGGACCGCTaGCATGAGCCAGGAATCTTG +
Preference number: 5 (lower is better)
Translates to: WVGPPKLCKPCQGALSQRVVQDR*HEPGIL
Trigger: CAAGATTCCTGGCTCATGCAAGCGGTCCTGGACCAC...TCTTTGGGACAGAGCTCCTTGGCAGGGTTTACAAAGCTTAGGTGGCCCTACCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481262.6
CDS-3UTR CAA 90 bp GGTATCTGGAGAAATGTACACAGGCAGCCTCAGCTGGAGTCATGCGAGCCAACTTCCTCGCTTAGCCCATaGATTGCATCGTCCACGGGC +
Preference number: 5 (lower is better)
Translates to: GIWRNVHRQPQLESCEPTSSLSP*IASSTG
Trigger: GCCCGTGGACGATGCAATCAATGGGCTAAGCGAGGA...AGTTGGCTCGCATGACTCCAGCTGAGGCTGCCTGTGTACATTTCTCCAGATACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CAA 90 bp GCCATAGGGTATCTGGAGAAATGTACACAGGCAGCCTCAGCTGGAGTCATGCGATCCTCGCTTAGCCCATaGATTGCATCGTCCACGGGC +
Preference number: 5 (lower is better)
Translates to: AIGYLEKCTQAASAGVMRSSLSP*IASSTG
Trigger: GCCCGTGGACGATGCAATCAATGGGCTAAGCGAGGA...TCGCATGACTCCAGCTGAGGCTGCCTGTGTACATTTCTCCAGATACCCTATGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CAA 90 bp CCAGACCCATTCCCTTCTCAGATCACACTCTATCCAGACTGCTGTACAGTGCGGTCCTCGCTTAGCCCATaGATTGCATCGTCCACGGGC +
Preference number: 5 (lower is better)
Translates to: PDPFPSQITLYPDCCTVRSSLSP*IASSTG
Trigger: GCCCGTGGACGATGCAATCAATGGGCTAAGCGAGGA...CCGCACTGTACAGCAGTCTGGATAGAGTGTGATCTGAGAAGGGAATGGGTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CAA 90 bp TGCTGTGGGCAGGGTGGGAAAGCCGCCACATCTCTACTTCCCAAGAAAGGCCACCCTATCTCATACAGCTaGGCATCTCGAAGAAAGCGG +
Preference number: 5 (lower is better)
Translates to: CCGQGGKAATSLLPKKGHPISYS*ASRRKR
Trigger: CCGCTTTCTTCGAGATGCCAAGCTGTATGAGATAGG...GTGGCCTTTCTTGGGAAGTAGAGATGTGGCGGCTTTCCCACCCTGCCCACAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CAA 90 bp TGCTGTGGGCAGGGTGGGAAAGCCGCCACATCTCTACTTCCCAAGAAAGGCCACGATGCTTGGGAGCTGTaGTGGAGAACTCAACCTCAT +
Preference number: 5 (lower is better)
Translates to: CCGQGGKAATSLLPKKGHDAWEL*WRTQPH
Trigger: ATGAGGTTGAGTTCTCCACAACAGCTCCCAAGCATC...GTGGCCTTTCTTGGGAAGTAGAGATGTGGCGGCTTTCCCACCCTGCCCACAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CAA 90 bp CAAGACAAGGAAGTGAAAGGGACTGCCTATGAGCCCAGGATCTTGCCCTCAGGACAGGCACACACCACCTaGCCTGGCCAAGCAAGCATA +
Preference number: 5 (lower is better)
Translates to: QDKEVKGTAYEPRILPSGQAHTT*PGQASI
Trigger: TATGCTTGCTTGGCCAGGCAAGGTGGTGTGTGCCTG...TCCTGAGGGCAAGATCCTGGGCTCATAGGCAGTCCCTTTCACTTCCTTGTCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CAA 90 bp GCCATAGGGTATCTGGAGAAATGTACACAGGCAGCCTCAGCTGGAGTCATGCGACAGGCACACACCACCTaGCCTGGCCAAGCAAGCATA +
Preference number: 5 (lower is better)
Translates to: AIGYLEKCTQAASAGVMRQAHTT*PGQASI
Trigger: TATGCTTGCTTGGCCAGGCAAGGTGGTGTGTGCCTG...TCGCATGACTCCAGCTGAGGCTGCCTGTGTACATTTCTCCAGATACCCTATGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS CCA 90 bp AGGCATACCCTTCTCCACAATGAAGGCTGTGATGCCCCGAGAAGCTaGCACAGCAGCCAGATCTGTCTTGGCATAGACAATCAGGACGTC +
Preference number: 5 (lower is better)
Translates to: RHTLLHNEGCDAPRS*HSSQICLGIDNQDV
Trigger: GACGTCCTGATTGTCTATGCCAAGACAGATCTGGCTGCTGTGCCAGCTTCTCGGGGCATCACAGCCTTCATTGTGGAGAAGGGTATGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000473112.6
ENST00000479013.7
ENST00000481262.6
ENST00000484250.1
ENST00000487418.8
ENST00000491554.6
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CAA 90 bp GCTGGAAGGACTTCCAGAGCTGCCCCAGACCAAAGGCACAGGGATGAGAAACATAGTGTAGAGGAAGGGTaGAGGGGCATGGCCAAAACA +
Preference number: 5 (lower is better)
Translates to: AGRTSRAAPDQRHRDEKHSVEEG*RGMAKT
Trigger: TGTTTTGGCCATGCCCCTCAACCCTTCCTCTACACT...ATGTTTCTCATCCCTGTGCCTTTGGTCTGGGGCAGCTCTGGAAGTCCTTCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000466756.2
CDS-3UTR CAA 90 bp GGGTATCTGGAGAAATGTACACAGGCAGCCTCAGCTGGAGTCATGCGAGCCAACTTGCGTACAAGCTGGTaGATGCAGAGGTTGGAGTGG +
Preference number: 5 (lower is better)
Translates to: GYLEKCTQAASAGVMRANLRTSW*MQRLEW
Trigger: CCACTCCAACCTCTGCATCAACCAGCTTGTACGCAA...GTTGGCTCGCATGACTCCAGCTGAGGCTGCCTGTGTACATTTCTCCAGATACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CAA 90 bp ACCCAGACCCATTCCCTTCTCAGATCACACTCTATCCAGACTGCTGTACAGTGCCCCCTCATCCCCAGCTaGTCCAGCTTCTTAGAGGTG +
Preference number: 5 (lower is better)
Translates to: TQTHSLLRSHSIQTAVQCPLIPS*SSFLEV
Trigger: CACCTCTAAGAAGCTGGACAAGCTGGGGATGAGGGG...GCACTGTACAGCAGTCTGGATAGAGTGTGATCTGAGAAGGGAATGGGTCTGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CAA 90 bp TGCTGTACAGGAGGAGCCAGTCTTCCAACAGTACACAAAAGCACGCTGTCCTCTCCCCTCATCCCCAGCTaGTCCAGCTTCTTAGAGGTG +
Preference number: 5 (lower is better)
Translates to: CCTGGASLPTVHKSTLSSPLIPS*SSFLEV
Trigger: CACCTCTAAGAAGCTGGACAAGCTGGGGATGAGGGG...AGAGGACAGCGTGCTTTTGTGTACTGTTGGAAGACTGGCTCCTCCTGTACAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CAA 90 bp CTGTGCTTGAGCAGAGAGATCTCCTTGCCAGAGCCTCACCCAAGAGAAAGAGGTTCATGGCCCAGGATGTaGGCAGCAGGAATCTTGCAG +
Preference number: 5 (lower is better)
Translates to: LCLSREISLPEPHPRERGSWPRM*AAGILQ
Trigger: CTGCAAGATTCCTGCTGCCAACATCCTGGGCCATGA...ACCTCTTTCTCTTGGGTGAGGCTCTGGCAAGGAGATCTCTCTGCTCAAGCACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CAA 90 bp CTGTGCTTGAGCAGAGAGATCTCCTTGCCAGAGCCTCACCCAAGAGAAAGAGGTCGAGGTTTCCACATGTaGGCCAGGCTGGTCTTGAAC +
Preference number: 5 (lower is better)
Translates to: LCLSREISLPEPHPRERGRGFHM*ARLVLN
Trigger: GTTCAAGACCAGCCTGGCCAACATGTGGAAACCTCG...ACCTCTTTCTCTTGGGTGAGGCTCTGGCAAGGAGATCTCTCTGCTCAAGCACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CAA 90 bp TGCTGTACAGGAGGAGCCAGTCTTCCAACAGTACACAAAAGCACGCTGTCCTCTCAGGCACACACCACCTaGCCTGGCCAAGCAAGCATA +
Preference number: 5 (lower is better)
Translates to: CCTGGASLPTVHKSTLSSQAHTT*PGQASI
Trigger: TATGCTTGCTTGGCCAGGCAAGGTGGTGTGTGCCTG...AGAGGACAGCGTGCTTTTGTGTACTGTTGGAAGACTGGCTCCTCCTGTACAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CAA 90 bp CAAGACAAGGAAGTGAAAGGGACTGCCTATGAGCCCAGGATCTTGCCCTCAGGATGTCATATTGGCTCATaGCAACCTCCACCTCCCGGG +
Preference number: 5 (lower is better)
Translates to: QDKEVKGTAYEPRILPSGCHIGS*QPPPPG
Trigger: CCCGGGAGGTGGAGGTTGCAATGAGCCAATATGACA...TCCTGAGGGCAAGATCCTGGGCTCATAGGCAGTCCCTTTCACTTCCTTGTCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CAA 90 bp CCAGACCCATTCCCTTCTCAGATCACACTCTATCCAGACTGCTGTACAGTGCGGTGTCATATTGGCTCATaGCAACCTCCACCTCCCGGG +
Preference number: 5 (lower is better)
Translates to: PDPFPSQITLYPDCCTVRCHIGS*QPPPPG
Trigger: CCCGGGAGGTGGAGGTTGCAATGAGCCAATATGACA...CCGCACTGTACAGCAGTCTGGATAGAGTGTGATCTGAGAAGGGAATGGGTCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CAA 90 bp GGGTATCTGGAGAAATGTACACAGGCAGCCTCAGCTGGAGTCATGCGAGCCAACACCAGTTCCCTCTTTTaGGAACTCGGAAGGGGTGGA +
Preference number: 5 (lower is better)
Translates to: GYLEKCTQAASAGVMRANTSSLF*ELGRGG
Trigger: TCCACCCCTTCCGAGTTCCAAAAAGAGGGAACTGGT...GTTGGCTCGCATGACTCCAGCTGAGGCTGCCTGTGTACATTTCTCCAGATACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CAA 90 bp CCAGACCCATTCCCTTCTCAGATCACACTCTATCCAGACTGCTGTACAGTGCGGCCCCATTTTGCCACATaGTCTCCAGGCTGGTCTCTC +
Preference number: 5 (lower is better)
Translates to: PDPFPSQITLYPDCCTVRPHFAT*SPGWSL
Trigger: GAGAGACCAGCCTGGAGACAATGTGGCAAAATGGGG...CCGCACTGTACAGCAGTCTGGATAGAGTGTGATCTGAGAAGGGAATGGGTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CAA 90 bp CAAGACAAGGAAGTGAAAGGGACTGCCTATGAGCCCAGGATCTTGCCCTCAGGACCCCATTTTGCCACATaGTCTCCAGGCTGGTCTCTC +
Preference number: 5 (lower is better)
Translates to: QDKEVKGTAYEPRILPSGPHFAT*SPGWSL
Trigger: GAGAGACCAGCCTGGAGACAATGTGGCAAAATGGGG...TCCTGAGGGCAAGATCCTGGGCTCATAGGCAGTCCCTTTCACTTCCTTGTCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CAA 90 bp CAACAATCCCCAGACAATATGCTTCCTGCTGAGTCCATTTTAAATCACACAACAGGCCCGCCGAAGGCGTaGCTGCCCTTGGACCGCACC +
Preference number: 5 (lower is better)
Translates to: QQSPDNMLPAESILNHTTGPPKA*LPLDRT
Trigger: GGTGCGGTCCAAGGGCAGCAACGCCTTCGGCGGGCC...TGTTGTGTGATTTAAAATGGACTCAGCAGGAAGCATATTGTCTGGGGATTGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650656.1
ENST00000651168.1
CDS TCA 90 bp TGGAGTCAGCTCTGGTCCAATGTCACCTCCCTGCAGAGTAGTCCGTaGAAGCTTCTTTGTCCAGGAGACAGGCCATTCAGAGCTAGTGAC +
Preference number: 5 (lower is better)
Translates to: WSQLWSNVTSLQSSP*KLLCPGDRPFRASD
Trigger: GTCACTAGCTCTGAATGGCCTGTCTCCTGGACAAAGAAGCTTTCACGGACTACTCTGCAGGGAGGTGACATTGGACCAGAGCTGACTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560660.1
CDS GCA 90 bp ACCCTTATTCTCATGGCCCAGGATGTTGGCAGCTGCCAGGATAAGTaGTGGTCAGAGGGAGAGAGCTGTCCACAGCCTCCTCACTTTTAT +
Preference number: 5 (lower is better)
Translates to: TLILMAQDVGSCQDK*WSEGESCPQPPHFY
Trigger: ATAAAAGTGAGGAGGCTGTGGACAGCTCTCTCCCTCTGACCAGCACTTATCCTGGCAGCTGCCAACATCCTGGGCCATGAGAATAAGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560660.1
CDS-3UTR CAA 90 bp CAAGACAAGGAAGTGAAAGGGACTGCCTATGAGCCCAGGATCTTGCCCTCAGGATTGCGTACAAGCTGGTaGATGCAGAGGTTGGAGTGG +
Preference number: 5 (lower is better)
Translates to: QDKEVKGTAYEPRILPSGLRTSW*MQRLEW
Trigger: CCACTCCAACCTCTGCATCAACCAGCTTGTACGCAA...TCCTGAGGGCAAGATCCTGGGCTCATAGGCAGTCCCTTTCACTTCCTTGTCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CAA 90 bp CTGTGCTTGAGCAGAGAGATCTCCTTGCCAGAGCCTCACCCAAGAGAAAGAGGTTGGGCCTCATTCCCATaGCGTACAAGCTGGTTGATG +
Preference number: 5 (lower is better)
Translates to: LCLSREISLPEPHPRERGWASFP*RTSWLM
Trigger: CATCAACCAGCTTGTACGCAATGGGAATGAGGCCCA...ACCTCTTTCTCTTGGGTGAGGCTCTGGCAAGGAGATCTCTCTGCTCAAGCACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CAA 90 bp GCCATAGGGTATCTGGAGAAATGTACACAGGCAGCCTCAGCTGGAGTCATGCGATGGGCCTCATTCCCATaGCGTACAAGCTGGTTGATG +
Preference number: 5 (lower is better)
Translates to: AIGYLEKCTQAASAGVMRWASFP*RTSWLM
Trigger: CATCAACCAGCTTGTACGCAATGGGAATGAGGCCCA...TCGCATGACTCCAGCTGAGGCTGCCTGTGTACATTTCTCCAGATACCCTATGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CAA 90 bp ACCCAGACCCATTCCCTTCTCAGATCACACTCTATCCAGACTGCTGTACAGTGCTCATGGCCCAGGATGTaGGCAGCAGGAATCTTGCAG +
Preference number: 5 (lower is better)
Translates to: TQTHSLLRSHSIQTAVQCSWPRM*AAGILQ
Trigger: CTGCAAGATTCCTGCTGCCAACATCCTGGGCCATGA...GCACTGTACAGCAGTCTGGATAGAGTGTGATCTGAGAAGGGAATGGGTCTGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CAA 90 bp ACCCAGACCCATTCCCTTCTCAGATCACACTCTATCCAGACTGCTGTACAGTGCCGAGGTTTCCACATGTaGGCCAGGCTGGTCTTGAAC +
Preference number: 5 (lower is better)
Translates to: TQTHSLLRSHSIQTAVQCRGFHM*ARLVLN
Trigger: GTTCAAGACCAGCCTGGCCAACATGTGGAAACCTCG...GCACTGTACAGCAGTCTGGATAGAGTGTGATCTGAGAAGGGAATGGGTCTGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CAA 90 bp TGCTGTACAGGAGGAGCCAGTCTTCCAACAGTACACAAAAGCACGCTGTCCTCTTGTCATATTGGCTCATaGCAACCTCCACCTCCCGGG +
Preference number: 5 (lower is better)
Translates to: CCTGGASLPTVHKSTLSSCHIGS*QPPPPG
Trigger: CCCGGGAGGTGGAGGTTGCAATGAGCCAATATGACA...AGAGGACAGCGTGCTTTTGTGTACTGTTGGAAGACTGGCTCCTCCTGTACAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CAA 90 bp CTGTGCTTGAGCAGAGAGATCTCCTTGCCAGAGCCTCACCCAAGAGAAAGAGGTACCAGTTCCCTCTTTTaGGAACTCGGAAGGGGTGGA +
Preference number: 5 (lower is better)
Translates to: LCLSREISLPEPHPRERGTSSLF*ELGRGG
Trigger: TCCACCCCTTCCGAGTTCCAAAAAGAGGGAACTGGT...ACCTCTTTCTCTTGGGTGAGGCTCTGGCAAGGAGATCTCTCTGCTCAAGCACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CAA 90 bp CCAGACCCATTCCCTTCTCAGATCACACTCTATCCAGACTGCTGTACAGTGCGGACCAGTTCCCTCTTTTaGGAACTCGGAAGGGGTGGA +
Preference number: 5 (lower is better)
Translates to: PDPFPSQITLYPDCCTVRTSSLF*ELGRGG
Trigger: TCCACCCCTTCCGAGTTCCAAAAAGAGGGAACTGGT...CCGCACTGTACAGCAGTCTGGATAGAGTGTGATCTGAGAAGGGAATGGGTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CAA 90 bp GACAATATGCTTCCTGCTGAGTCCATTTTAAATCACACAACACTAGCCGTGGCAGGGACGGAACTGGGGTaGGTGAGGAGCCAACCCCAC +
Preference number: 5 (lower is better)
Translates to: DNMLPAESILNHTTLAVAGTELG*VRSQPH
Trigger: GTGGGGTTGGCTCCTCACCAACCCCAGTTCCGTCCC...TGCCACGGCTAGTGTTGTGTGATTTAAAATGGACTCAGCAGGAAGCATATTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CAA 90 bp CTGTGCTTGAGCAGAGAGATCTCCTTGCCAGAGCCTCACCCAAGAGAAAGAGGTATGAAGCGCCCCATTTaGCCACATTGTCTCCAGGCT +
Preference number: 5 (lower is better)
Translates to: LCLSREISLPEPHPRERGMKRPI*PHCLQA
Trigger: AGCCTGGAGACAATGTGGCAAAATGGGGCGCTTCAT...ACCTCTTTCTCTTGGGTGAGGCTCTGGCAAGGAGATCTCTCTGCTCAAGCACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CAA 90 bp GGGTATCTGGAGAAATGTACACAGGCAGCCTCAGCTGGAGTCATGCGAGCCAACAGGTTCTTGAACTCATaGCTGCGATCGATCTCCTGG +
Preference number: 5 (lower is better)
Translates to: GYLEKCTQAASAGVMRANRFLNS*LRSISW
Trigger: CCAGGAGATCGATCGCAGCAATGAGTTCAAGAACCT...GTTGGCTCGCATGACTCCAGCTGAGGCTGCCTGTGTACATTTCTCCAGATACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000487418.8
ENST00000651168.1
CDS CCA 90 bp CTTATTCTCATGGCCCAGGATGTTGGCAGCTGCCAGGATAAGTGCTaGTCAGAGGGAGAGAGCTGTCCACAGCCTCCTCACTTTTATCAA +
Preference number: 5 (lower is better)
Translates to: LILMAQDVGSCQDKC*SEGESCPQPPHFYQ
Trigger: TTGATAAAAGTGAGGAGGCTGTGGACAGCTCTCTCCCTCTGACCAGCACTTATCCTGGCAGCTGCCAACATCCTGGGCCATGAGAATAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560660.1
CDS-3UTR CAA 90 bp AGGATTTTGAGGAAAGGAAGCTTCTGGTCTGAGATCCAAGAGGCGAGTTGGGGGTGGGCCTCATTCCCATaGCGTACAAGCTGGTTGATG +
Preference number: 5 (lower is better)
Translates to: RILRKGSFWSEIQEASWGWASFP*RTSWLM
Trigger: CATCAACCAGCTTGTACGCAATGGGAATGAGGCCCA...CCCCCAACTCGCCTCTTGGATCTCAGACCAGAAGCTTCCTTTCCTCAAAATCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481262.6
CDS-3UTR CAA 90 bp ACCCAGACCCATTCCCTTCTCAGATCACACTCTATCCAGACTGCTGTACAGTGCTGGGCCTCATTCCCATaGCGTACAAGCTGGTTGATG +
Preference number: 5 (lower is better)
Translates to: TQTHSLLRSHSIQTAVQCWASFP*RTSWLM
Trigger: CATCAACCAGCTTGTACGCAATGGGAATGAGGCCCA...GCACTGTACAGCAGTCTGGATAGAGTGTGATCTGAGAAGGGAATGGGTCTGGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CAA 90 bp GCCCTCCCTCCCAGGTGGGTGTTGGGCGGAAAAGGTCTGCCCAAAACACTGAATCCTTTCTTTTCCGCTTaGAGCTTCATAGAGACAACA +
Preference number: 5 (lower is better)
Translates to: ALPPRWVLGGKGLPKTLNPFFSA*SFIETT
Trigger: TGTTGTCTCTATGAAGCTCAAAGCGGAAAAGAAAGG...ATTCAGTGTTTTGGGCAGACCTTTTCCGCCCAACACCCACCTGGGAGGGAGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000481262.6
CDS-3UTR CAA 90 bp TGGGAAAGGGAGGCTGAGACCTCTCTCCTAAGGGCTGATTTTACCTTCCTGTCCGATGCTTGGGAGCTGTaGTGGAGAACTCAACCTCAT +
Preference number: 5 (lower is better)
Translates to: WEREAETSLLRADFTFLSDAWEL*WRTQPH
Trigger: ATGAGGTTGAGTTCTCCACAACAGCTCCCAAGCATC...GGACAGGAAGGTAAAATCAGCCCTTAGGAGAGAGGTCTCAGCCTCCCTTTCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CAA 90 bp TGCTGTACAGGAGGAGCCAGTCTTCCAACAGTACACAAAAGCACGCTGTCCTCTCGAGGTTTTACCATCTaGGCCAGGCTGGTCTTGAAC +
Preference number: 5 (lower is better)
Translates to: CCTGGASLPTVHKSTLSSRGFTI*ARLVLN
Trigger: GTTCAAGACCAGCCTGGCCAAGATGGTAAAACCTCG...AGAGGACAGCGTGCTTTTGTGTACTGTTGGAAGACTGGCTCCTCCTGTACAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CAA 90 bp GCCATAGGGTATCTGGAGAAATGTACACAGGCAGCCTCAGCTGGAGTCATGCGAAGGTTCTTGAACTCATaGCTGCGATCGATCTCCTGG +
Preference number: 5 (lower is better)
Translates to: AIGYLEKCTQAASAGVMRRFLNS*LRSISW
Trigger: CCAGGAGATCGATCGCAGCAATGAGTTCAAGAACCT...TCGCATGACTCCAGCTGAGGCTGCCTGTGTACATTTCTCCAGATACCCTATGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000487418.8
ENST00000651168.1
CDS-3UTR CAA 90 bp AGGAAGCAGCGGCAAGTAGATTGCTTCTCCCCAGATAGGTTTGTTTCACAATATAAGGCGTTGCTGCCCTaGGACCGCACCCGAGCCAAT +
Preference number: 5 (lower is better)
Translates to: RKQRQVDCFSPDRFVSQYKALLP*DRTRAN
Trigger: ATTGGCTCGGGTGCGGTCCAAGGGCAGCAACGCCTT...ATATTGTGAAACAAACCTATCTGGGGAGAAGCAATCTACTTGCCGCTGCTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CAA 90 bp AAGAGAAAGTTTGAAGGGCTGGAAGGACTTCCAGAGCTGCCCCAGACCAAAGGCGAATTTGCGGGGAGCTaGATAGTTCACTGGTTCAGT +
Preference number: 5 (lower is better)
Translates to: KRKFEGLEGLPELPQTKGEFAGS*IVHWFS
Trigger: ACTGAACCAGTGAACTATCAAGCTCCCCGCAAATTC...GCCTTTGGTCTGGGGCAGCTCTGGAAGTCCTTCCAGCCCTTCAAACTTTCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466756.2
CDS-3UTR CAA 90 bp GAAGGGGAAGGCCCAGGGGGATCAGAGTCATATTTGCCTTGCCAAGCCTTAGATGAAGCAAGAGAAAGTTaGAAGGGCTGGAAGGACTTC +
Preference number: 5 (lower is better)
Translates to: EGEGPGGSESYLPCQALDEARES*KGWKDF
Trigger: GAAGTCCTTCCAGCCCTTCAAACTTTCTCTTGCTTC...ATCTAAGGCTTGGCAAGGCAAATATGACTCTGATCCCCCTGGGCCTTCCCCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000466756.2
CDS-3UTR CAA 90 bp CGCCGAGTACCAGTTTCAGCAAAGGTGCAGAGCTGTGGTATAGGGGTGAGGCAGGAACATAGAAGGATTTaGAGGAAAGGAAGCTTCTGG +
Preference number: 5 (lower is better)
Translates to: RRVPVSAKVQSCGIGVRQEHRRI*RKGSFW
Trigger: CCAGAAGCTTCCTTTCCTCAAAATCCTTCTATGTTC...CTGCCTCACCCCTATACCACAGCTCTGCACCTTTGCTGAAACTGGTACTCGGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481262.6
ENST00000491554.6
CDS-3UTR CAA 90 bp GCGCCGAGTACCAGTTTCAGCAAAGGTGCAGAGCTGTGGTATAGGGGTGAGGCAGAACATAGAAGGATTTaGAGGAAAGGAAGCTTCTGG +
Preference number: 5 (lower is better)
Translates to: APSTSFSKGAELWYRGEAEHRRI*RKGSFW
Trigger: CCAGAAGCTTCCTTTCCTCAAAATCCTTCTATGTTC...TGCCTCACCCCTATACCACAGCTCTGCACCTTTGCTGAAACTGGTACTCGGCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481262.6
ENST00000491554.6
CDS-3UTR CAA 90 bp ACCCAGACCCATTCCCTTCTCAGATCACACTCTATCCAGACTGCTGTACAGTGCGATGCTTGGGAGCTGTaGTGGAGAACTCAACCTCAT +
Preference number: 5 (lower is better)
Translates to: TQTHSLLRSHSIQTAVQCDAWEL*WRTQPH
Trigger: ATGAGGTTGAGTTCTCCACAACAGCTCCCAAGCATC...GCACTGTACAGCAGTCTGGATAGAGTGTGATCTGAGAAGGGAATGGGTCTGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CAA 90 bp CCAGACCCATTCCCTTCTCAGATCACACTCTATCCAGACTGCTGTACAGTGCGGATGATTCTGCTGTGCTaGAGCAGAGAGATCTCCTTG +
Preference number: 5 (lower is better)
Translates to: PDPFPSQITLYPDCCTVRMILLC*SREISL
Trigger: CAAGGAGATCTCTCTGCTCAAGCACAGCAGAATCAT...CCGCACTGTACAGCAGTCTGGATAGAGTGTGATCTGAGAAGGGAATGGGTCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CAA 90 bp AGCAAGATGGCCCTTTTAGTCACATTCATCTCCAACATAGCAGGGAGCAAGACATATGAGCCCAGGATCTaGCCCTCAGGATGGGACGGA +
Preference number: 5 (lower is better)
Translates to: SKMALLVTFISNIAGSKTYEPRI*PSGWDG
Trigger: TCCGTCCCATCCTGAGGGCAAGATCCTGGGCTCATA...TGTCTTGCTCCCTGCTATGTTGGAGATGAATGTGACTAAAAGGGCCATCTTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CAA 90 bp CCAGACCCATTCCCTTCTCAGATCACACTCTATCCAGACTGCTGTACAGTGCGGAATTCTCGCAGGTTCTaGAACTCATTGCTGCGATCG +
Preference number: 5 (lower is better)
Translates to: PDPFPSQITLYPDCCTVRNSRRF*NSLLRS
Trigger: CGATCGCAGCAATGAGTTCAAGAACCTGCGAGAATT...CCGCACTGTACAGCAGTCTGGATAGAGTGTGATCTGAGAAGGGAATGGGTCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000487418.8
ENST00000651168.1
CDS-3UTR CAA 90 bp GAAAGTTTGAAGGGCTGGAAGGACTTCCAGAGCTGCCCCAGACCAAAGGCACAGAGAGTCATATTTGCCTaGCCAAGCCTTAGATCTTAC +
Preference number: 5 (lower is better)
Translates to: ESLKGWKDFQSCPRPKAQRVIFA*PSLRSY
Trigger: GTAAGATCTAAGGCTTGGCAAGGCAAATATGACTCT...CTGTGCCTTTGGTCTGGGGCAGCTCTGGAAGTCCTTCCAGCCCTTCAAACTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466756.2
CDS-3UTR CAA 90 bp AGGAAGCAGCGGCAAGTAGATTGCTTCTCCCCAGATAGGTTTGTTTCACAATATCCCCTCATCCCCAGCTaGTCCAGCTTCTTAGAGGTG +
Preference number: 5 (lower is better)
Translates to: RKQRQVDCFSPDRFVSQYPLIPS*SSFLEV
Trigger: CACCTCTAAGAAGCTGGACAAGCTGGGGATGAGGGG...ATATTGTGAAACAAACCTATCTGGGGAGAAGCAATCTACTTGCCGCTGCTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CAA 90 bp CGAGTACCAGTTTCAGCAAAGGTGCAGAGCTGTGGTATAGGGGTGAGGCAGCAGTCTGTCCCAAAGACGTaGGAGAACATAGAAGGATTT +
Preference number: 5 (lower is better)
Translates to: RVPVSAKVQSCGIGVRQQSVPKT*ENIEGF
Trigger: AAATCCTTCTATGTTCTCCAACGTCTTTGGGACAGA...CTGCTGCCTCACCCCTATACCACAGCTCTGCACCTTTGCTGAAACTGGTACTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481262.6
ENST00000491554.6
CDS-3UTR CAA 90 bp GGGTATCTGGAGAAATGTACACAGGCAGCCTCAGCTGGAGTCATGCGAGCCAACCCTTATCCAAAATGCTaGGAACCACAAGTGTTTCAG +
Preference number: 5 (lower is better)
Translates to: GYLEKCTQAASAGVMRANPYPKC*EPQVFQ
Trigger: CTGAAACACTTGTGGTTCCAAGCATTTTGGATAAGG...GTTGGCTCGCATGACTCCAGCTGAGGCTGCCTGTGTACATTTCTCCAGATACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CAA 90 bp AGCAAGATGGCCCTTTTAGTCACATTCATCTCCAACATAGCAGGGAGCAAGACACGAGGTTTCCACATGTaGGCCAGGCTGGTCTTGAAC +
Preference number: 5 (lower is better)
Translates to: SKMALLVTFISNIAGSKTRGFHM*ARLVLN
Trigger: GTTCAAGACCAGCCTGGCCAACATGTGGAAACCTCG...TGTCTTGCTCCCTGCTATGTTGGAGATGAATGTGACTAAAAGGGCCATCTTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CAA 90 bp GACAATATGCTTCCTGCTGAGTCCATTTTAAATCACACAACACTAGCCGTGGCACAGGCACACACCACCTaGCCTGGCCAAGCAAGCATA +
Preference number: 5 (lower is better)
Translates to: DNMLPAESILNHTTLAVAQAHTT*PGQASI
Trigger: TATGCTTGCTTGGCCAGGCAAGGTGGTGTGTGCCTG...TGCCACGGCTAGTGTTGTGTGATTTAAAATGGACTCAGCAGGAAGCATATTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CAA 90 bp GACAATATGCTTCCTGCTGAGTCCATTTTAAATCACACAACACTAGCCGTGGCATATGAGCCCAGGATCTaGCCCTCAGGATGGGACGGA +
Preference number: 5 (lower is better)
Translates to: DNMLPAESILNHTTLAVAYEPRI*PSGWDG
Trigger: TCCGTCCCATCCTGAGGGCAAGATCCTGGGCTCATA...TGCCACGGCTAGTGTTGTGTGATTTAAAATGGACTCAGCAGGAAGCATATTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CAA 90 bp CCAGACCCATTCCCTTCTCAGATCACACTCTATCCAGACTGCTGTACAGTGCGGCCTTTCTTTTCCGCTTaGAGCTTCATAGAGACAACA +
Preference number: 5 (lower is better)
Translates to: PDPFPSQITLYPDCCTVRPFFSA*SFIETT
Trigger: TGTTGTCTCTATGAAGCTCAAAGCGGAAAAGAAAGG...CCGCACTGTACAGCAGTCTGGATAGAGTGTGATCTGAGAAGGGAATGGGTCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CAA 90 bp GCCATAGGGTATCTGGAGAAATGTACACAGGCAGCCTCAGCTGGAGTCATGCGACCTTTCTTTTCCGCTTaGAGCTTCATAGAGACAACA +
Preference number: 5 (lower is better)
Translates to: AIGYLEKCTQAASAGVMRPFFSA*SFIETT
Trigger: TGTTGTCTCTATGAAGCTCAAAGCGGAAAAGAAAGG...TCGCATGACTCCAGCTGAGGCTGCCTGTGTACATTTCTCCAGATACCCTATGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CAA 90 bp CAAGACAAGGAAGTGAAAGGGACTGCCTATGAGCCCAGGATCTTGCCCTCAGGACCTTTCTTTTCCGCTTaGAGCTTCATAGAGACAACA +
Preference number: 5 (lower is better)
Translates to: QDKEVKGTAYEPRILPSGPFFSA*SFIETT
Trigger: TGTTGTCTCTATGAAGCTCAAAGCGGAAAAGAAAGG...TCCTGAGGGCAAGATCCTGGGCTCATAGGCAGTCCCTTTCACTTCCTTGTCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CAA 90 bp GCCATAGGGTATCTGGAGAAATGTACACAGGCAGCCTCAGCTGGAGTCATGCGACCTTATCCAAAATGCTaGGAACCACAAGTGTTTCAG +
Preference number: 5 (lower is better)
Translates to: AIGYLEKCTQAASAGVMRPYPKC*EPQVFQ
Trigger: CTGAAACACTTGTGGTTCCAAGCATTTTGGATAAGG...TCGCATGACTCCAGCTGAGGCTGCCTGTGTACATTTCTCCAGATACCCTATGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CAA 90 bp AGGAAGCAGCGGCAAGTAGATTGCTTCTCCCCAGATAGGTTTGTTTCACAATATCCCCATTTTGCCACATaGTCTCCAGGCTGGTCTCTC +
Preference number: 5 (lower is better)
Translates to: RKQRQVDCFSPDRFVSQYPHFAT*SPGWSL
Trigger: GAGAGACCAGCCTGGAGACAATGTGGCAAAATGGGG...ATATTGTGAAACAAACCTATCTGGGGAGAAGCAATCTACTTGCCGCTGCTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CAA 90 bp AGGCACAGGGATGAGAAACATGGCAGTGAGGACTCCTTGCAACAAGAACACGAAGGATCAGAGTCATATTaGCCTTGCCAAGCCTTAGAT +
Preference number: 5 (lower is better)
Translates to: RHRDEKHGSEDSLQQEHEGSESY*PCQALD
Trigger: ATCTAAGGCTTGGCAAGGCAAATATGACTCTGATCC...TTCGTGTTCTTGTTGCAAGGAGTCCTCACTGCCATGTTTCTCATCCCTGTGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466756.2
CDS-3UTR CAA 90 bp AGGATTTTGAGGAAAGGAAGCTTCTGGTCTGAGATCCAAGAGGCGAGTTGGGGGTCTGTCCCAAAGACGTaGGAGAACATAGAAGGATTT +
Preference number: 5 (lower is better)
Translates to: RILRKGSFWSEIQEASWGSVPKT*ENIEGF
Trigger: AAATCCTTCTATGTTCTCCAACGTCTTTGGGACAGA...CCCCCAACTCGCCTCTTGGATCTCAGACCAGAAGCTTCCTTTCCTCAAAATCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000481262.6
ENST00000491554.6
CDS-3UTR CAA 90 bp CAACAATCCCCAGACAATATGCTTCCTGCTGAGTCCATTTTAAATCACACAACATCCTCGCTTAGCCCATaGATTGCATCGTCCACGGGC +
Preference number: 5 (lower is better)
Translates to: QQSPDNMLPAESILNHTTSSLSP*IASSTG
Trigger: GCCCGTGGACGATGCAATCAATGGGCTAAGCGAGGA...TGTTGTGTGATTTAAAATGGACTCAGCAGGAAGCATATTGTCTGGGGATTGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CAA 90 bp GACAATATGCTTCCTGCTGAGTCCATTTTAAATCACACAACACTAGCCGTGGCAATGAAGCGCCCCATTTaGCCACATTGTCTCCAGGCT +
Preference number: 5 (lower is better)
Translates to: DNMLPAESILNHTTLAVAMKRPI*PHCLQA
Trigger: AGCCTGGAGACAATGTGGCAAAATGGGGCGCTTCAT...TGCCACGGCTAGTGTTGTGTGATTTAAAATGGACTCAGCAGGAAGCATATTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CAA 90 bp GACAATATGCTTCCTGCTGAGTCCATTTTAAATCACACAACACTAGCCGTGGCACCTATCTCATACAGCTaGGCATCTCGAAGAAAGCGG +
Preference number: 5 (lower is better)
Translates to: DNMLPAESILNHTTLAVAPISYS*ASRRKR
Trigger: CCGCTTTCTTCGAGATGCCAAGCTGTATGAGATAGG...TGCCACGGCTAGTGTTGTGTGATTTAAAATGGACTCAGCAGGAAGCATATTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CAA 90 bp AGCAAGATGGCCCTTTTAGTCACATTCATCTCCAACATAGCAGGGAGCAAGACAATGATTCTGCTGTGCTaGAGCAGAGAGATCTCCTTG +
Preference number: 5 (lower is better)
Translates to: SKMALLVTFISNIAGSKTMILLC*SREISL
Trigger: CAAGGAGATCTCTCTGCTCAAGCACAGCAGAATCAT...TGTCTTGCTCCCTGCTATGTTGGAGATGAATGTGACTAAAAGGGCCATCTTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CAA 90 bp CAACAATCCCCAGACAATATGCTTCCTGCTGAGTCCATTTTAAATCACACAACATTGCGTACAAGCTGGTaGATGCAGAGGTTGGAGTGG +
Preference number: 5 (lower is better)
Translates to: QQSPDNMLPAESILNHTTLRTSW*MQRLEW
Trigger: CCACTCCAACCTCTGCATCAACCAGCTTGTACGCAA...TGTTGTGTGATTTAAAATGGACTCAGCAGGAAGCATATTGTCTGGGGATTGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS-3UTR CAA 90 bp CAACAATCCCCAGACAATATGCTTCCTGCTGAGTCCATTTTAAATCACACAACACCTATCTCATACAGCTaGGCATCTCGAAGAAAGCGG +
Preference number: 5 (lower is better)
Translates to: QQSPDNMLPAESILNHTTPISYS*ASRRKR
Trigger: CCGCTTTCTTCGAGATGCCAAGCTGTATGAGATAGG...TGTTGTGTGATTTAAAATGGACTCAGCAGGAAGCATATTGTCTGGGGATTGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000650656.1
ENST00000651168.1
CDS CCA 72 bp CTTCACTCCACAGACGTGAGGCCGAGGTCAGAGGACTaGACCCGAGGTCGGAGGCCCCGCGTCCCGCCCCCG +
Preference number: 6 (lower is better)
Translates to: LHSTDVRPRSED*TRGRRPRVPPP
Trigger: CGGGGGCGGGACGCGGGGCCTCCGACCTCGGGTCCAGTCCTCTGACCTCGGCCTCACGTCTGTGGAGTGAAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558610.5
CDS CCA 72 bp ATCCAGGCTTCGCCGCCCACCAAACCGGCTAGGGGGTaGGCTGCAGCAGCCAATCACCCTAGGCGGCCCGCC +
Preference number: 6 (lower is better)
Translates to: IQASPPTKPARG*AAAANHPRRPA
Trigger: GGCGGGCCGCCTAGGGTGATTGGCTGCTGCAGCCCACCCCCTAGCCGGTTTGGTGGGCGGCGAAGCCTGGAT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000650656.1
ENST00000651168.1
CDS CCA 72 bp GCCAGCTTCCAGCCAGTGCAACGGCCGCAGGCCGAGTaGCCCTGCCCCGAACGCTGCAAATGCTGGCGTGCT +
Preference number: 6 (lower is better)
Translates to: ASFQPVQRPQAE*PCPERCKCWRA
Trigger: AGCACGCCAGCATTTGCAGCGTTCGGGGCAGGGCCACTCGGCCTGCGGCCGTTGCACTGGCTGGAAGCTGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650656.1
ENST00000651168.1
CDS GCA 72 bp CCAATCAACCGTGATCGCCTGCCAGCTTCCAGCCAGTaGAACGGCCGCAGGCCGAGTGGCCCTGCCCCGAAC +
Preference number: 6 (lower is better)
Translates to: PINRDRLPASSQ*NGRRPSGPAPN
Trigger: GTTCGGGGCAGGGCCACTCGGCCTGCGGCCGTTGCACTGGCTGGAAGCTGGCAGGCGATCACGGTTGATTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650656.1
ENST00000651168.1
CDS CCA 72 bp ATTGCATCGTCCACGGGCAAAAGCGAGTGGGCCCGCTaGGAAACGAAGCCGGCAAGCGGCGGCCGCAGCCTC +
Preference number: 6 (lower is better)
Translates to: IASSTGKSEWAR*ETKPASGGRSL
Trigger: GAGGCTGCGGCCGCCGCTTGCCGGCTTCGTTTCCCAGCGGGCCCACTCGCTTTTGCCCGTGGACGATGCAAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000610693.5
ENST00000650656.1
ENST00000651168.1
CDS CAA 72 bp CTGACCTCGGGTCTCGCCCTCCCTCCCAGGTGGGTGTaGGGCGGAAAAGGTCTGCCAGGTGCTGGGAGCCAC +
Preference number: 6 (lower is better)
Translates to: LTSGLALPPRWV*GGKGLPGAGSH
Trigger: GTGGCTCCCAGCACCTGGCAGACCTTTTCCGCCCAACACCCACCTGGGAGGGAGGGCGAGACCCGAGGTCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491554.6
CDS CAA 72 bp CAGCAGCCAATCACCCTAGGCGGCCCGCCGAAGGCGTaGCTGCCCTTGGACCGCACCCGAGCCAATCAACCG +
Preference number: 6 (lower is better)
Translates to: QQPITLGGPPKA*LPLDRTRANQP
Trigger: CGGTTGATTGGCTCGGGTGCGGTCCAAGGGCAGCAACGCCTTCGGCGGGCCGCCTAGGGTGATTGGCTGCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650656.1
ENST00000651168.1
CDS GCA 72 bp CTTGGACCGCACCCGAGCCAATCAACCGTGATCGCCTaGCAGCTTCCAGCCAGTGCAACGGCCGCAGGCCGA +
Preference number: 6 (lower is better)
Translates to: LGPHPSQSTVIA*QLPASATAAGR
Trigger: TCGGCCTGCGGCCGTTGCACTGGCTGGAAGCTGGCAGGCGATCACGGTTGATTGGCTCGGGTGCGGTCCAAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650656.1
ENST00000651168.1
CDS TCA 72 bp TTGCTGCCCTTGGACCGCACCCGAGCCAATCAACCGTaGTCGCCTGCCAGCTTCCAGCCAGTGCAACGGCCG +
Preference number: 6 (lower is better)
Translates to: LLPLDRTRANQP*SPASFQPVQRP
Trigger: CGGCCGTTGCACTGGCTGGAAGCTGGCAGGCGATCACGGTTGATTGGCTCGGGTGCGGTCCAAGGGCAGCAA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650656.1
ENST00000651168.1
CDS CCA 72 bp AGCCCATTGATTGCATCGTCCACGGGCAAAAGCGAGTaGGCCCGCTGGGAAACGAAGCCGGCAAGCGGCGGC +
Preference number: 6 (lower is better)
Translates to: SPLIASSTGKSE*ARWETKPASGG
Trigger: GCCGCCGCTTGCCGGCTTCGTTTCCCAGCGGGCCCACTCGCTTTTGCCCGTGGACGATGCAATCAATGGGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000610693.5
ENST00000650656.1
ENST00000651168.1
CDS CCA 72 bp GGCCCCGTGGGCACCTCCTCATCCCACCACCGGGTGTaGTGGCAAAATGCTAGCGTGGGAAGGCCAGAATCC +
Preference number: 6 (lower is better)
Translates to: GPVGTSSSHHRV*WQNASVGRPES
Trigger: GGATTCTGGCCTTCCCACGCTAGCATTTTGCCACCACACCCGGTGGTGGGATGAGGAGGTGCCCACGGGGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497816.1
CDS GCA 72 bp AGTGCAGCTCAGCCCCACTCCCTGACTGCCCCCGACTaGCCGGACCTCCCAACTCACTCGCAGGTTCTTGAA +
Preference number: 6 (lower is better)
Translates to: SAAQPHSLTAPD*PDLPTHSQVLE
Trigger: TTCAAGAACCTGCGAGTGAGTTGGGAGGTCCGGGCAGTCGGGGGCAGTCAGGGAGTGGGGCTGAGCTGCACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610693.5
CDS GCA 72 bp ACGCCACCCCAGCAGCCGAGTCGCAGTCGCCATCTCTaGCATGCACGAAGAGCCAGCGCTGAAACTGAGCCA +
Preference number: 6 (lower is better)
Translates to: TPPQQPSRSRHL*HARRASAETEP
Trigger: TGGCTCAGTTTCAGCGCTGGCTCTTCGTGCATGGCAGAGATGGCGACTGCGACTCGGCTGCTGGGGTGGCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650656.1
ENST00000651168.1
CDS CCA 72 bp CCCGTGGGCACCTCCTCATCCCACCACCGGGTGTGGTaGCAAAATGCTAGCGTGGGAAGGCCAGAATCCCAG +
Preference number: 6 (lower is better)
Translates to: PVGTSSSHHRVW*QNASVGRPESQ
Trigger: CTGGGATTCTGGCCTTCCCACGCTAGCATTTTGCCACCACACCCGGTGGTGGGATGAGGAGGTGCCCACGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497816.1
CDS CCA 72 bp GCTTGCATGAGCCTGTCAGAAAGGAGAAAGGCCCCGTaGGCACCTCCTCATCCCACCACCGGGTGTGGTGGC +
Preference number: 6 (lower is better)
Translates to: ACMSLSERRKAP*APPHPTTGCGG
Trigger: GCCACCACACCCGGTGGTGGGATGAGGAGGTGCCCACGGGGCCTTTCTCCTTTCTGACAGGCTCATGCAAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497816.1
CDS CAA 90 bp GGCTTCCCTCACGTGCAGGTAGGGAATGGTGTGGTCCAGGACCGCTaGCATGAGCCTGTCAGAAAGGAGAAAGGCCCCGTGGGCACCTCC +
Preference number: 6 (lower is better)
Translates to: GFPHVQVGNGVVQDR*HEPVRKEKGPVGTS
Trigger: GGAGGTGCCCACGGGGCCTTTCTCCTTTCTGACAGGCTCATGCAAGCGGTCCTGGACCACACCATTCCCTACCTGCACGTGAGGGAAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497816.1
CDS CAA 72 bp CTGACCTCGGGTCTCGCCCTCCCTCCCAGGTGGGTGTaGGGCGGAAAAGGTCTGCCCTTCATTATTGCCCCA +
Preference number: 6 (lower is better)
Translates to: LTSGLALPPRWV*GGKGLPFIIAP
Trigger: TGGGGCAATAATGAAGGGCAGACCTTTTCCGCCCAACACCCACCTGGGAGGGAGGGCGAGACCCGAGGTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473112.6
CDS TCA 72 bp GCAGGTAGGGAATGGTGTGGTCCAGGACCGCTTGCATaGGCCTGTCAGAAAGGAGAAAGGCCCCGTGGGCAC +
Preference number: 6 (lower is better)
Translates to: AGREWCGPGPLA*ACQKGERPRGH
Trigger: GTGCCCACGGGGCCTTTCTCCTTTCTGACAGGCTCATGCAAGCGGTCCTGGACCACACCATTCCCTACCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497816.1
CDS GCA 72 bp GCAGAGGTTGGAGTGGGCACCGTAACTGAGCCCCACTaGTCCGGAAGCTCGGGATATCTCCTCCATCACCAG +
Preference number: 6 (lower is better)
Translates to: AEVGVGTVTEPH*SGSSGYLLHHQ
Trigger: CTGGTGATGGAGGAGATATCCCGAGCTTCCGGAGCAGTGGGGCTCAGTTACGGTGCCCACTCCAACCTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000473112.6
ENST00000479013.7
ENST00000487418.8
ENST00000558610.5
ENST00000610693.5
ENST00000650656.1
ENST00000651168.1
CDS GCA 72 bp AGTCTTGCCACAGTTACGGCACTGACTGGCCAGAGGTaGAGGGGCGTGACAGCCCAGGTGTCGTTTCACAGC +
Preference number: 6 (lower is better)
Translates to: SLATVTALTGQR*RGVTAQVSFHS
Trigger: GCTGTGAAACGACACCTGGGCTGTCACGCCCCTGCACCTCTGGCCAGTCAGTGCCGTAACTGTGGCAAGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497816.1
CDS CAA 72 bp CGGACCTCCCAACTCACTCGCAGGTTCTTGAACTCATaGCTGCGATCGATCTCCTGGGCCTTGGGGGCCAGG +
Preference number: 6 (lower is better)
Translates to: RTSQLTRRFLNS*LRSISWALGAR
Trigger: CCTGGCCCCCAAGGCCCAGGAGATCGATCGCAGCAATGAGTTCAAGAACCTGCGAGTGAGTTGGGAGGTCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000610693.5
CDS TCA 72 bp TCTGACGAAGCTGCCTCTGCTCCTCGCTTAGCCCATTaGTTGCATCGTCCACGGGCAAAAGCGAGTGGGCCC +
Preference number: 6 (lower is better)
Translates to: SDEAASAPRLAH*LHRPRAKASGP
Trigger: GGGCCCACTCGCTTTTGCCCGTGGACGATGCAATCAATGGGCTAAGCGAGGAGCAGAGGCAGCTTCGTCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000487418.8
ENST00000610693.5
ENST00000651168.1
CDS TCA 72 bp ACTGTCCCACGGTCTCAAATCTTCACTCCACAGACGTaGGGCCGAGGTCAGAGGACTGGACCCGAGGTCGGA +
Preference number: 6 (lower is better)
Translates to: TVPRSQIFTPQT*GRGQRTGPEVG
Trigger: TCCGACCTCGGGTCCAGTCCTCTGACCTCGGCCTCACGTCTGTGGAGTGAAGATTTGAGACCGTGGGACAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558610.5
CDS TCA 72 bp CGACTGCCCGGACCTCCCAACTCACTCGCAGGTTCTTaGACTCATTGCTGCGATCGATCTCCTGGGCCTTGG +
Preference number: 6 (lower is better)
Translates to: RLPGPPNSLAGS*THCCDRSPGPW
Trigger: CCAAGGCCCAGGAGATCGATCGCAGCAATGAGTTCAAGAACCTGCGAGTGAGTTGGGAGGTCCGGGCAGTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610693.5
CDS CAA 72 bp CACGTGCAGGTAGGGAATGGTGTGGTCCAGGACCGCTaGCATGAGCCTGTCAGAAAGGAGAAAGGCCCCGTG +
Preference number: 6 (lower is better)
Translates to: HVQVGNGVVQDR*HEPVRKEKGPV
Trigger: CACGGGGCCTTTCTCCTTTCTGACAGGCTCATGCAAGCGGTCCTGGACCACACCATTCCCTACCTGCACGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497816.1
CDS CAA 72 bp CCGACTGCCCGGACCTCCCAACTCACTCGCAGGTTCTaGAACTCATTGCTGCGATCGATCTCCTGGGCCTTG +
Preference number: 6 (lower is better)
Translates to: PTARTSQLTRRF*NSLLRSISWAL
Trigger: CAAGGCCCAGGAGATCGATCGCAGCAATGAGTTCAAGAACCTGCGAGTGAGTTGGGAGGTCCGGGCAGTCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610693.5
CDS CCA 72 bp AACTTCAGAAAGTCTTGCCACAGTTACGGCACTGACTaGCCAGAGGTGCAGGGGCGTGACAGCCCAGGTGTC +
Preference number: 6 (lower is better)
Translates to: NFRKSCHSYGTD*PEVQGRDSPGV
Trigger: GACACCTGGGCTGTCACGCCCCTGCACCTCTGGCCAGTCAGTGCCGTAACTGTGGCAAGACTTTCTGAAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497816.1
CDS TCA 72 bp TCCAAAATTCCTGCCTCTGCTCCTCGCTTAGCCCATTaGTTGCATCGTCCACGGGCAAAAGCGAGTGGGCCC +
Preference number: 6 (lower is better)
Translates to: SKIPASAPRLAH*LHRPRAKASGP
Trigger: GGGCCCACTCGCTTTTGCCCGTGGACGATGCAATCAATGGGCTAAGCGAGGAGCAGAGGCAGGAATTTTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000479013.7
ENST00000650656.1
CDS GCA 72 bp AAAAGGGGGCGAAGGGTCTCAGGACTAGTGAAAGTCTaGATTGAAGGCTCTGCCGATGACCAGCCGCCTCAC +
Preference number: 6 (lower is better)
Translates to: KRGRRVSGLVKV*IEGSADDQPPH
Trigger: GTGAGGCGGCTGGTCATCGGCAGAGCCTTCAATGCAGACTTTCACTAGTCCTGAGACCCTTCGCCCCCTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000497816.1
ENST00000650656.1
ENST00000651168.1
CDS GCA 72 bp CCGCCACATCTCTACTTCCCAAGAAAGGCCACTAGGTaGAGGAAAAGGGGGCGAAGGGTCTCAGGACTAGTG +
Preference number: 6 (lower is better)
Translates to: PPHLYFPRKATR*RKRGRRVSGLV
Trigger: CACTAGTCCTGAGACCCTTCGCCCCCTTTTCCTGCACCTAGTGGCCTTTCTTGGGAAGTAGAGATGTGGCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000497816.1
ENST00000650656.1
ENST00000651168.1
CDS CCA 72 bp TCACCTCGCTGGTCCCAGCCCCTATCTCATACAGCTTaGCATCTCGAAGAAAGCGGCCCATGGGAAAGTCAT +
Preference number: 6 (lower is better)
Translates to: SPRWSQPLSHTA*HLEESGPWESH
Trigger: ATGACTTTCCCATGGGCCGCTTTCTTCGAGATGCCAAGCTGTATGAGATAGGGGCTGGGACCAGCGAGGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000497816.1
ENST00000650656.1
ENST00000651168.1
CDS CAA 72 bp AGGGGAAGGCCCAGGGGGATCAGAGTCATATTTGCCTaGCCAAGCCTTAGATCTTACAGGTGCTGGGAGCCA +
Preference number: 6 (lower is better)
Translates to: RGRPRGIRVIFA*PSLRSYRCWEP
Trigger: TGGCTCCCAGCACCTGTAAGATCTAAGGCTTGGCAAGGCAAATATGACTCTGATCCCCCTGGGCCTTCCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000466756.2
CDS CAA 72 bp GCAGAAGGGGAAGGCCCAGGGGGATCAGAGTCATATTaGCCTTGCCAAGCCTTAGATCTTACAGGTGCTGGG +
Preference number: 6 (lower is better)
Translates to: AEGEGPGGSESY*PCQALDLTGAG
Trigger: CCCAGCACCTGTAAGATCTAAGGCTTGGCAAGGCAAATATGACTCTGATCCCCCTGGGCCTTCCCCTTCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000466756.2
CDS CAA 72 bp TTCCAAAATTCCTGCCTCTGCTCCTCGCTTAGCCCATaGATTGCATCGTCCACGGGCAAAAGCGAGTGGGCC +
Preference number: 6 (lower is better)
Translates to: FQNSCLCSSLSP*IASSTGKSEWA
Trigger: GGCCCACTCGCTTTTGCCCGTGGACGATGCAATCAATGGGCTAAGCGAGGAGCAGAGGCAGGAATTTTGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000479013.7
ENST00000650656.1
CDS CAA 72 bp AGCTGCTTCCAAAATTCTCGCAGGTTCTTGAACTCATaGCTGCGATCGATCTCCTGGGCCTTGGGGGCCAGG +
Preference number: 6 (lower is better)
Translates to: SCFQNSRRFLNS*LRSISWALGAR
Trigger: CCTGGCCCCCAAGGCCCAGGAGATCGATCGCAGCAATGAGTTCAAGAACCTGCGAGAATTTTGGAAGCAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000487418.8
ENST00000558610.5
ENST00000651168.1
CDS TCA 72 bp TTGGGCGGAAAAGGTCTGCCAGGTGCTGGGAGCCACTaGAGAATTTGCGGGGAGCTTGATAGTTCACTGGTT +
Preference number: 6 (lower is better)
Translates to: LGGKGLPGAGSH*RICGELDSSLV
Trigger: AACCAGTGAACTATCAAGCTCCCCGCAAATTCTTCAGTGGCTCCCAGCACCTGGCAGACCTTTTCCGCCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491554.6
CDS CCA 72 bp GGCCAAAACACTGAATGCCGTCCAGGGCTACCTGTGTaGCACACTCAGCTGAGTAAAGAATCACACCTGCAC +
Preference number: 6 (lower is better)
Translates to: GQNTECRPGLPV*HTQLSKESHLH
Trigger: GTGCAGGTGTGATTCTTTACTCAGCTGAGTGTGCCACACAGGTAGCCCTGGACGGCATTCAGTGTTTTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466756.2
ENST00000491554.6
CDS CCA 72 bp GCCACTGAAGAATTTGCGGGGAGCTTGATAGTTCACTaGTTCAGTGTAGAGGAAGGGTTGAGGGGCATGGCC +
Preference number: 6 (lower is better)
Translates to: ATEEFAGSLIVH*FSVEEGLRGMA
Trigger: GGCCATGCCCCTCAACCCTTCCTCTACACTGAACCAGTGAACTATCAAGCTCCCCGCAAATTCTTCAGTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000466756.2
ENST00000491554.6
CDS CAA 90 bp AGCAGCAGAAGGGGAAGGCCCAGGGGGATCAGAGTCATATTTGCCTaGCCAAGCCTTAGATCTTACAGGTGCTGGGAGCCACTGAAGAAT +
Preference number: 6 (lower is better)
Translates to: SSRRGRPRGIRVIFA*PSLRSYRCWEPLKN
Trigger: ATTCTTCAGTGGCTCCCAGCACCTGTAAGATCTAAGGCTTGGCAAGGCAAATATGACTCTGATCCCCCTGGGCCTTCCCCTTCTGCTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000466756.2
CDS TCA 72 bp CTCTGGTCCAATGTCACCTCCCTGCAGAGTAGTCCGTaGAAGCTTCTTTGTCCAGGAGACAGGCCATTCAGA +
Preference number: 6 (lower is better)
Translates to: LWSNVTSLQSSP*KLLCPGDRPFR
Trigger: TCTGAATGGCCTGTCTCCTGGACAAAGAAGCTTTCACGGACTACTCTGCAGGGAGGTGACATTGGACCAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560660.1
CDS GCA 72 bp TTCCGCTTTGAGCTTCATAGAGACAACATCAGAGCCTaGATTGGGCTCACTCATGGCCAGGGCTCCGATGTA +
Preference number: 6 (lower is better)
Translates to: FRFELHRDNIRA*IGLTHGQGSDV
Trigger: TACATCGGAGCCCTGGCCATGAGTGAGCCCAATGCAGGCTCTGATGTTGTCTCTATGAAGCTCAAAGCGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000473112.6
ENST00000479013.7
ENST00000481262.6
ENST00000484250.1
ENST00000487418.8
ENST00000558610.5
ENST00000610693.5
ENST00000650656.1
ENST00000651168.1
CDS CCA 72 bp CACCAAAACACTGAATGCCGTCCAGGGCTACCTGTGTaGCACACTCAGCTGAGTAAAGAATCACACCTGCAC +
Preference number: 6 (lower is better)
Translates to: HQNTECRPGLPV*HTQLSKESHLH
Trigger: GTGCAGGTGTGATTCTTTACTCAGCTGAGTGTGCCACACAGGTAGCCCTGGACGGCATTCAGTGTTTTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000497252.5
ENST00000497816.1
ENST00000650656.1
ENST00000651168.1
CDS CAA 72 bp CAGGTGCTGGGAGCCACTGAAGAATTTGCGGGGAGCTaGATAGTTCACTGGTTCAGTGTAGAGGAAGGGTTG +
Preference number: 6 (lower is better)
Translates to: QVLGATEEFAGS*IVHWFSVEEGL
Trigger: CAACCCTTCCTCTACACTGAACCAGTGAACTATCAAGCTCCCCGCAAATTCTTCAGTGGCTCCCAGCACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466756.2
ENST00000491554.6
CDS CAA 90 bp TCTTCAAAGATTAGCTCACAGGTGTTAGAGCCCCTCATCCCCAGCTaGTCCAGCTTCTTAGAGGTGCTAAAGCCAGGCATACCCTTCTCC +
Preference number: 6 (lower is better)
Translates to: SSKISSQVLEPLIPS*SSFLEVLKPGIPFS
Trigger: GGAGAAGGGTATGCCTGGCTTTAGCACCTCTAAGAAGCTGGACAAGCTGGGGATGAGGGGCTCTAACACCTGTGAGCTAATCTTTGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000473112.6
ENST00000479013.7
ENST00000481262.6
ENST00000484250.1
ENST00000487418.8
ENST00000491554.6
ENST00000650656.1
ENST00000651168.1
CDS CAA 72 bp TTCGGGAGATACTTCTCTTTCTGGGCCTCATTCCCATaGCGTACAAGCTGGTTGATGCAGAGGTTGGAGTGG +
Preference number: 6 (lower is better)
Translates to: FGRYFSFWASFP*RTSWLMQRLEW
Trigger: CCACTCCAACCTCTGCATCAACCAGCTTGTACGCAATGGGAATGAGGCCCAGAAAGAGAAGTATCTCCCGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000473112.6
ENST00000479013.7
ENST00000484250.1
ENST00000487418.8
ENST00000558610.5
ENST00000610693.5
ENST00000650656.1
ENST00000651168.1
CDS CAA 72 bp ATTAGCTCACAGGTGTTAGAGCCCCTCATCCCCAGCTaGTCCAGCTTCTTAGAGGTGCTAAAGCCAGGCATA +
Preference number: 6 (lower is better)
Translates to: ISSQVLEPLIPS*SSFLEVLKPGI
Trigger: TATGCCTGGCTTTAGCACCTCTAAGAAGCTGGACAAGCTGGGGATGAGGGGCTCTAACACCTGTGAGCTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000473112.6
ENST00000479013.7
ENST00000481262.6
ENST00000484250.1
ENST00000487418.8
ENST00000491554.6
ENST00000497252.5
ENST00000650656.1
ENST00000651168.1
CDS CAA 90 bp TCTTCAAAGATTAGCTCACAGGTGTTAGAGCCCCTCATCCCCAGCTaGTCCAGCTTCTTAGAGGTGCTAAAGCCAGGCATACCTTCCAAG +
Preference number: 6 (lower is better)
Translates to: SSKISSQVLEPLIPS*SSFLEVLKPGIPSK
Trigger: CTTGGAAGGTATGCCTGGCTTTAGCACCTCTAAGAAGCTGGACAAGCTGGGGATGAGGGGCTCTAACACCTGTGAGCTAATCTTTGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497252.5
CDS TCA 72 bp TGGCATCTCGAAGAAAGCGGCCCATGGGAAAGTCATTaGTGTAGCCATTGCCACCAAAACACTGAATGCCGT +
Preference number: 6 (lower is better)
Translates to: WHLEESGPWESH*CSHCHQNTECR
Trigger: ACGGCATTCAGTGTTTTGGTGGCAATGGCTACATCAATGACTTTCCCATGGGCCGCTTTCTTCGAGATGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000479013.7
ENST00000487418.8
ENST00000497816.1
ENST00000650656.1
ENST00000651168.1
CDS TCA 72 bp CATGGTCTGACGAAGCTCAGCCTGTTCAGGTGTAAGTaGACTACATACAGATTGAGGGCCCTTGTGCCACAA +
Preference number: 6 (lower is better)
Translates to: HGLTKLSLFRCK*TTYRLRALVPQ
Trigger: TTGTGGCACAAGGGCCCTCAATCTGTATGTAGTTCACTTACACCTGAACAGGCTGAGCTTCGTCAGACCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558610.5
CDS CCA 72 bp AAACAAAACACTGAATGCCGTCCAGGGCTACCTGTGTaGCACACTCAGCTGAGTAAAGAATCACACCTGCAC +
Preference number: 6 (lower is better)
Translates to: KQNTECRPGLPV*HTQLSKESHLH
Trigger: GTGCAGGTGTGATTCTTTACTCAGCTGAGTGTGCCACACAGGTAGCCCTGGACGGCATTCAGTGTTTTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559575.5