RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ITSN2 (Homo sapiens)

Ensembl gene IDs: ENSG00000198399

Ensembl transcript IDs: ENST00000355123.9, ENST00000361999.7, ENST00000406921.7, ENST00000407704.1, ENST00000412011.5, ENST00000416160.1, ENST00000427234.5, ENST00000443927.5, ENST00000449392.1, ENST00000478720.1, ENST00000479575.1, ENST00000622089.4

Found 854 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GAGGCTGCAGCCTCTCATCCTGACCCTTCCCCTCCTGAGTGGCTGTaGCCCAGCAGAGGTCACTGGCGTGGAATGGTTACAGCGTCACCA +
Preference number: 1 (lower is better)
Translates to: EAAASHPDPSPPEWL*PSRGHWRGMVTASP
Trigger: TGGTGACGCTGTAACCATTCCACGCCAGTGACCTCTGCTGGGTCACAGCCACTCAGGAGGGGAAGGGTCAGGATGAGAGGCTGCAGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
3UTR CCA 90 bp CCCCTCCTGAGTGGCTGTGACCCAGCAGAGGTCACTGGCGTGGAATaGTTACAGCGTCACCAAACCACTCCACGGTGGACACATTCAACC +
Preference number: 1 (lower is better)
Translates to: PLLSGCDPAEVTGVE*LQRHQTTPRWTHST
Trigger: GGTTGAATGTGTCCACCGTGGAGTGGTTTGGTGACGCTGTAACCATTCCACGCCAGTGACCTCTGCTGGGTCACAGCCACTCAGGAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
3UTR TCA 90 bp TCCAACGAAGCCATGCGAATGCCCTCTTGTTCTCCCGCTTCACTCTaGGTGACCTCATCTGGGGGAAAGAGCTCATTAGAGACTTTCAAT +
Preference number: 1 (lower is better)
Translates to: SNEAMRMPSCSPASL*VTSSGGKSSLETFN
Trigger: ATTGAAAGTCTCTAATGAGCTCTTTCCCCCAGATGAGGTCACTCAGAGTGAAGCGGGAGAACAAGAGGGCATTCGCATGGCTTCGTTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406921.7
3UTR CCA 90 bp GCGAATGCCCTCTTGTTCTCCCGCTTCACTCTGAGTGACCTCATCTaGGGGAAAGAGCTCATTAGAGACTTTCAATCTCAAGCATTATCC +
Preference number: 1 (lower is better)
Translates to: ANALLFSRFTLSDLI*GKELIRDFQSQALS
Trigger: GGATAATGCTTGAGATTGAAAGTCTCTAATGAGCTCTTTCCCCCAGATGAGGTCACTCAGAGTGAAGCGGGAGAACAAGAGGGCATTCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406921.7
3UTR GCA 90 bp TTTCCATTTGGTTTGCAGGCTTTTAATTCTGTAGCTTCAATGACATaGACCATCAGGCGCCCAATGCCTGAAGTCTTTTGGGAGCGGGCT +
Preference number: 1 (lower is better)
Translates to: FPFGLQAFNSVASMT*TIRRPMPEVFWERA
Trigger: AGCCCGCTCCCAAAAGACTTCAGGCATTGGGCGCCTGATGGTGCATGTCATTGAAGCTACAGAATTAAAAGCCTGCAAACCAAATGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427234.5
ENST00000449392.1
3UTR CCA 90 bp ACCAAACCACTCCACGGTGGACACATTCAACCGAGCGGTAACATCTaGTGGTCTGATGCCTCATTTCCAAGTAATACTTTTTATAGCCCT +
Preference number: 1 (lower is better)
Translates to: TKPLHGGHIQPSGNI*WSDASFPSNTFYSP
Trigger: AGGGCTATAAAAAGTATTACTTGGAAATGAGGCATCAGACCACCAGATGTTACCGCTCGGTTGAATGTGTCCACCGTGGAGTGGTTTGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
3UTR CCA 90 bp AAACCACTCCACGGTGGACACATTCAACCGAGCGGTAACATCTGGTaGTCTGATGCCTCATTTCCAAGTAATACTTTTTATAGCCCTGAA +
Preference number: 1 (lower is better)
Translates to: KPLHGGHIQPSGNIW*SDASFPSNTFYSPE
Trigger: TTCAGGGCTATAAAAAGTATTACTTGGAAATGAGGCATCAGACCACCAGATGTTACCGCTCGGTTGAATGTGTCCACCGTGGAGTGGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
3UTR TCA 90 bp ACAATATGCTCCCATTGGGTTTTCCAAACTGATACAACCATGAGGTaGACACTTTCACTGTTTCACAGTTCCTCCAGAGATACCAGTTTA +
Preference number: 1 (lower is better)
Translates to: TICSHWVFQTDTTMR*TLSLFHSSSRDTSL
Trigger: TAAACTGGTATCTCTGGAGGAACTGTGAAACAGTGAAAGTGTTCACCTCATGGTTGTATCAGTTTGGAAAACCCAATGGGAGCATATTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406921.7
3UTR TCA 90 bp ATTTTACAATATGCTCCCATTGGGTTTTCCAAACTGATACAACCATaGGGTGAACACTTTCACTGTTTCACAGTTCCTCCAGAGATACCA +
Preference number: 1 (lower is better)
Translates to: ILQYAPIGFSKLIQP*GEHFHCFTVPPEIP
Trigger: TGGTATCTCTGGAGGAACTGTGAAACAGTGAAAGTGTTCACCTCATGGTTGTATCAGTTTGGAAAACCCAATGGGAGCATATTGTAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406921.7
3UTR TCA 90 bp ATTTGGGAACTATTTTACAATATGCTCCCATTGGGTTTTCCAAACTaGTACAACCATGAGGTGAACACTTTCACTGTTTCACAGTTCCTC +
Preference number: 1 (lower is better)
Translates to: IWELFYNMLPLGFPN*YNHEVNTFTVSQFL
Trigger: GAGGAACTGTGAAACAGTGAAAGTGTTCACCTCATGGTTGTATCAGTTTGGAAAACCCAATGGGAGCATATTGTAAAATAGTTCCCAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406921.7
3UTR TCA 90 bp TGTCATCAGCGTAGAGGTCACTGGTATAAACAAACAGTAGCTATATaGTATTTGGGAACTATTTTACAATATGCTCCCATTGGGTTTTCC +
Preference number: 1 (lower is better)
Translates to: CHQRRGHWYKQTVAI*YLGTILQYAPIGFS
Trigger: GGAAAACCCAATGGGAGCATATTGTAAAATAGTTCCCAAATATCATATAGCTACTGTTTGTTTATACCAGTGACCTCTACGCTGATGACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406921.7
3UTR-3UTR CCA 90 bp GAAGCTGCATGGTGCTCCCTCAGCCCCAAGAGAGCGCAGTCTCTCATTCTCCAGCCAGCCCCAGCCTTGTaGGCTGTCCCGCTGGTGCTG +
Preference number: 2 (lower is better)
Translates to: EAAWCSLSPKRAQSLILQPAPAL*AVPLVL
Trigger: CAGCACCAGCGGGACAGCCCACAAGGCTGGGGCTGG...CTGGAGAATGAGAGACTGCGCTCTCTTGGGGCTGAGGGAGCACCATGCAGCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000427234.5
ENST00000622089.4
3UTR-3UTR TCA 90 bp ACCCAGACCTCCCCGGTGGGGACCTCATGCAGCAGCAGTCGGCGGGTCATAGGGCTCTGTCAAACAGGGTaGGACACAGCACGTCTTGGT +
Preference number: 2 (lower is better)
Translates to: TQTSPVGTSCSSSRRVIGLCQTG*DTARLG
Trigger: ACCAAGACGTGCTGTGTCTCACCCTGTTTGACAGAG...CCCTATGACCCGCCGACTGCTGCTGCATGAGGTCCCCACCGGGGAGGTCTGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427234.5
3UTR-3UTR CCA 90 bp CCAGCCCCAGCCTTGTGGGCTGTCCCGCTGGTGCTGTCCTTTAGAACCCCTACAAGGGGTGAAGCTGCATaGTGCTCCCTCAGCCCCAAG +
Preference number: 2 (lower is better)
Translates to: PAPALWAVPLVLSFRTPTRGEAA*CSLSPK
Trigger: CTTGGGGCTGAGGGAGCACCATGCAGCTTCACCCCT...TGTAGGGGTTCTAAAGGACAGCACCAGCGGGACAGCCCACAAGGCTGGGGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000427234.5
3UTR-3UTR TCA 90 bp CTGCATGGTGCTCCCTCAGCCCCAAGAGAGCGCAGTCTCTCATTCTCCAGCCCCTGGCTTTGTGAGGGGTaGAGCTGCATGGTGCTCCCT +
Preference number: 2 (lower is better)
Translates to: LHGAPSAPRERSLSFSSPWLCEG*SCMVLP
Trigger: AGGGAGCACCATGCAGCTTCACCCCTCACAAAGCCA...GGGGCTGGAGAATGAGAGACTGCGCTCTCTTGGGGCTGAGGGAGCACCATGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000427234.5
ENST00000622089.4
3UTR-3UTR CCA 90 bp CTGCATGGTGCTCCCTCAGCCCCAAGAGAGCGCAGTCTCTCATTCTCCAGCCCCTGTGGGCTGTCCCGCTaGTGCTGTCCTTTAGAACCC +
Preference number: 2 (lower is better)
Translates to: LHGAPSAPRERSLSFSSPCGLSR*CCPLEP
Trigger: GGGTTCTAAAGGACAGCACCAGCGGGACAGCCCACA...GGGGCTGGAGAATGAGAGACTGCGCTCTCTTGGGGCTGAGGGAGCACCATGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000427234.5
ENST00000622089.4
3UTR-3UTR CCA 90 bp ACCCAGACCTCCCCGGTGGGGACCTCATGCAGCAGCAGTCGGCGGGTCATAGGGCCGAGCGGTAACATCTaGTGGTCTGATGCCTCATTT +
Preference number: 2 (lower is better)
Translates to: TQTSPVGTSCSSSRRVIGPSGNI*WSDASF
Trigger: AAATGAGGCATCAGACCACCAGATGTTACCGCTCGG...CCCTATGACCCGCCGACTGCTGCTGCATGAGGTCCCCACCGGGGAGGTCTGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427234.5
3UTR CAA 90 bp CGGTCTGCCATAGGCCCTTCCCATCCACTCTATCCCCGTCCTTCCTaGATGGGGCTCCTGCCACATCCAACGAAGCCATGCGAATGCCCT +
Preference number: 2 (lower is better)
Translates to: RSAIGPSHPLYPRPS*MGLLPHPTKPCECP
Trigger: AGGGCATTCGCATGGCTTCGTTGGATGTGGCAGGAGCCCCATCAAGGAAGGACGGGGATAGAGTGGATGGGAAGGGCCTATGGCAGACCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406921.7
3UTR-3UTR GCA 90 bp CTTCCCCTCCTGAGTGGCTGTGACCCAGCAGAGGTCACTGGCGTGGAATGGTTAGGTGAAGCTGCATGGTaGTCCCTCAGCCCCAAGAGA +
Preference number: 2 (lower is better)
Translates to: LPLLSGCDPAEVTGVEWLGEAAW*SLSPKR
Trigger: TCTCTTGGGGCTGAGGGAGCACCATGCAGCTTCACC...TAACCATTCCACGCCAGTGACCTCTGCTGGGTCACAGCCACTCAGGAGGGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
3UTR-3UTR CCA 90 bp CTTCCCCTCCTGAGTGGCTGTGACCCAGCAGAGGTCACTGGCGTGGAATGGTTATGTGGGCTGTCCCGCTaGTGCTGTCCTTTAGAACCC +
Preference number: 2 (lower is better)
Translates to: LPLLSGCDPAEVTGVEWLCGLSR*CCPLEP
Trigger: GGGTTCTAAAGGACAGCACCAGCGGGACAGCCCACA...TAACCATTCCACGCCAGTGACCTCTGCTGGGTCACAGCCACTCAGGAGGGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
3UTR-3UTR CCA 90 bp GTGAAGCTGCATGGTGCTCCCTCAGCCCCAAGAGAGCGCAGTCTCTCATTCTCCCCCAGCAGAGGTCACTaGCGTGGAATGGTTACAGCG +
Preference number: 2 (lower is better)
Translates to: VKLHGAPSAPRERSLSFSPSRGH*RGMVTA
Trigger: CGCTGTAACCATTCCACGCCAGTGACCTCTGCTGGG...GGAGAATGAGAGACTGCGCTCTCTTGGGGCTGAGGGAGCACCATGCAGCTTCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
3UTR-3UTR CCA 90 bp GTCACCAAACCACTCCACGGTGGACACATTCAACCGAGCGGTAACATCTGGTGGAGGGGTGAAGCTGCATaGTGCTCCCTCAGCCCCAAG +
Preference number: 2 (lower is better)
Translates to: VTKPLHGGHIQPSGNIWWRGEAA*CSLSPK
Trigger: CTTGGGGCTGAGGGAGCACCATGCAGCTTCACCCCT...CCACCAGATGTTACCGCTCGGTTGAATGTGTCCACCGTGGAGTGGTTTGGTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
3UTR-3UTR CCA 90 bp CCTCAGCCCCAAGAGAGCGCAGTCTCTCATTCTCCAGCCCCAGCCTTGTGGGCTCCGAGCGGTAACATCTaGTGGTCTGATGCCTCATTT +
Preference number: 2 (lower is better)
Translates to: PQPQESAVSHSPAPALWAPSGNI*WSDASF
Trigger: AAATGAGGCATCAGACCACCAGATGTTACCGCTCGG...AGCCCACAAGGCTGGGGCTGGAGAATGAGAGACTGCGCTCTCTTGGGGCTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000427234.5
ENST00000622089.4
3UTR-3UTR CCA 90 bp GAAGCTGCATGGTGCTCCCTCAGCCCCAAGAGAGCGCAGTCTCTCATTCTCCAGCAAACCACTCCACGGTaGACACATTCAACCGAGCGG +
Preference number: 2 (lower is better)
Translates to: EAAWCSLSPKRAQSLILQQTTPR*THSTER
Trigger: CCGCTCGGTTGAATGTGTCCACCGTGGAGTGGTTTG...CTGGAGAATGAGAGACTGCGCTCTCTTGGGGCTGAGGGAGCACCATGCAGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
3UTR-3UTR CCA 90 bp TCCACGGTGGACACATTCAACCGAGCGGTAACATCTGGTGGTCTGATGCCTCATAGGGGTGAAGCTGCATaGTGCTCCCTCAGCCCCAAG +
Preference number: 2 (lower is better)
Translates to: STVDTFNRAVTSGGLMPHRGEAA*CSLSPK
Trigger: CTTGGGGCTGAGGGAGCACCATGCAGCTTCACCCCT...ATGAGGCATCAGACCACCAGATGTTACCGCTCGGTTGAATGTGTCCACCGTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
3UTR-3UTR CCA 90 bp CCAGCCCCAGCCTTGTGGGCTGTCCCGCTGGTGCTGTCCTTTAGAACCCCTACAAGCGGTAACATCTGGTaGTCTGATGCCTCATTTCCA +
Preference number: 2 (lower is better)
Translates to: PAPALWAVPLVLSFRTPTSGNIW*SDASFP
Trigger: TGGAAATGAGGCATCAGACCACCAGATGTTACCGCT...TGTAGGGGTTCTAAAGGACAGCACCAGCGGGACAGCCCACAAGGCTGGGGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427234.5
3UTR-3UTR TCA 90 bp AGTCGGCGGGTCATAGGGCCTTTGCTTTCCTGTTCTGTTCGAATTTTTGCCACTCAGGCGCCCAATGCCTaGAGTCTTTTGGGAGCGGGC +
Preference number: 2 (lower is better)
Translates to: SRRVIGPLLSCSVRIFATQAPNA*SLLGAG
Trigger: GCCCGCTCCCAAAAGACTTCAGGCATTGGGCGCCTG...AGTGGCAAAAATTCGAACAGAACAGGAAAGCAAAGGCCCTATGACCCGCCGACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427234.5
3UTR-3UTR TCA 90 bp CAGCAGCAGTCGGCGGGTCATAGGGCCTTTGCTTTCCTGTTCTGTTCGAATTTTTGGCTTTGTGAGGGGTaGAGCTGCATGGTGCTCCCT +
Preference number: 2 (lower is better)
Translates to: QQQSAGHRAFAFLFCSNFWLCEG*SCMVLP
Trigger: AGGGAGCACCATGCAGCTTCACCCCTCACAAAGCCA...AAAATTCGAACAGAACAGGAAAGCAAAGGCCCTATGACCCGCCGACTGCTGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427234.5
3UTR CAA 90 bp CCGGTGGGGACCTCATGCAGCAGCAGTCGGCGGGTCATAGGGCCTTaGCTTTCCTGTTCTGTTCGAATTTTTGCCACTGGAATTTCAGTA +
Preference number: 2 (lower is better)
Translates to: PVGTSCSSSRRVIGP*LSCSVRIFATGISV
Trigger: TACTGAAATTCCAGTGGCAAAAATTCGAACAGAACAGGAAAGCAAAGGCCCTATGACCCGCCGACTGCTGCTGCATGAGGTCCCCACCGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427234.5
3UTR-3UTR GCA 90 bp CTCCTGCCACATCCAACGAAGCCATGCGAATGCCCTCTTGTTCTCCCGCTTCACTCAAAAGTGATGCCTTaGTTTGACTCTGCGTGGAGG +
Preference number: 2 (lower is better)
Translates to: LLPHPTKPCECPLVLPLHSKVMP*FDSAWR
Trigger: CCTCCACGCAGAGTCAAAGCAAGGCATCACTTTTGA...GTGAAGCGGGAGAACAAGAGGGCATTCGCATGGCTTCGTTGGATGTGGCAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406921.7
3UTR-3UTR CCA 90 bp GCGCAGTCTCTCATTCTCCAGCCCCAGCCTTGTGGGCTGTCCCGCTGGTGCTGTGGTTTGGTTTCTTTATaGGAAAGGTGTTTGCATAGA +
Preference number: 2 (lower is better)
Translates to: AQSLILQPQPCGLSRWCCGLVSL*ERCLHR
Trigger: TCTATGCAAACACCTTTCCCATAAAGAAACCAAACC...ACAGCACCAGCGGGACAGCCCACAAGGCTGGGGCTGGAGAATGAGAGACTGCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000427234.5
ENST00000622089.4
3UTR-3UTR CCA 90 bp TGCACGAGTAGACGCTATTTCAGTATCAGGCCGCGCCAAGTGTCGAGGCTGCAGAGCGGTAACATCTGGTaGTCTGATGCCTCATTTCCA +
Preference number: 2 (lower is better)
Translates to: CTSRRYFSIRPRQVSRLQSGNIW*SDASFP
Trigger: TGGAAATGAGGCATCAGACCACCAGATGTTACCGCT...CTGCAGCCTCGACACTTGGCGCGGCCTGATACTGAAATAGCGTCTACTCGTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
3UTR-3UTR CCA 90 bp GACCCAGCAGAGGTCACTGGCGTGGAATGGTTACAGCGTCACCAAACCACTCCAAGCGGTAACATCTGGTaGTCTGATGCCTCATTTCCA +
Preference number: 2 (lower is better)
Translates to: DPAEVTGVEWLQRHQTTPSGNIW*SDASFP
Trigger: TGGAAATGAGGCATCAGACCACCAGATGTTACCGCT...TGGAGTGGTTTGGTGACGCTGTAACCATTCCACGCCAGTGACCTCTGCTGGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
3UTR-3UTR CCA 90 bp CTCCTGCCACATCCAACGAAGCCATGCGAATGCCCTCTTGTTCTCCCGCTTCACCTGAGTGACCTCATCTaGGGGAAAGAGCTCATTAGA +
Preference number: 2 (lower is better)
Translates to: LLPHPTKPCECPLVLPLHLSDLI*GKELIR
Trigger: TCTAATGAGCTCTTTCCCCCAGATGAGGTCACTCAG...GTGAAGCGGGAGAACAAGAGGGCATTCGCATGGCTTCGTTGGATGTGGCAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406921.7
3UTR-3UTR CCA 90 bp GTACTATGGGGTTTGGTTTCTTTATGGGAAAGGTGTTTGCATAGATTGCTAGCTCCAGCCCCAGCCTTGTaGGCTGTCCCGCTGGTGCTG +
Preference number: 2 (lower is better)
Translates to: VLWGLVSLWERCLHRLLAPAPAL*AVPLVL
Trigger: CAGCACCAGCGGGACAGCCCACAAGGCTGGGGCTGG...AGCTAGCAATCTATGCAAACACCTTTCCCATAAAGAAACCAAACCCCATAGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000427234.5
ENST00000622089.4
3UTR-3UTR CCA 90 bp CCTCAGCCCCAAGAGAGCGCAGTCTCTCATTCTCCAGCCCCAGCCTTGTGGGCTGGTTTGGTTTCTTTATaGGAAAGGTGTTTGCATAGA +
Preference number: 2 (lower is better)
Translates to: PQPQESAVSHSPAPALWAGLVSL*ERCLHR
Trigger: TCTATGCAAACACCTTTCCCATAAAGAAACCAAACC...AGCCCACAAGGCTGGGGCTGGAGAATGAGAGACTGCGCTCTCTTGGGGCTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000427234.5
ENST00000622089.4
3UTR-3UTR CCA 90 bp GTGAAGCTGCATGGTGCTCCCTCAGCCCCAAGAGAGCGCAGTCTCTCATTCTCCTCGAATTTTTGCCACTaGAATTTCAGTACGACCCAG +
Preference number: 2 (lower is better)
Translates to: VKLHGAPSAPRERSLSFSSNFCH*NFSTTQ
Trigger: CTGGGTCGTACTGAAATTCCAGTGGCAAAAATTCGA...GGAGAATGAGAGACTGCGCTCTCTTGGGGCTGAGGGAGCACCATGCAGCTTCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427234.5
3UTR-3UTR GCA 90 bp TCCACGGTGGACACATTCAACCGAGCGGTAACATCTGGTGGTCTGATGCCTCATGCTAGCTATTTAGTGTaGAGGAAAACAGAGCCCCCA +
Preference number: 2 (lower is better)
Translates to: STVDTFNRAVTSGGLMPHASYLV*RKTEPP
Trigger: TGGGGGCTCTGTTTTCCTGCACACTAAATAGCTAGC...ATGAGGCATCAGACCACCAGATGTTACCGCTCGGTTGAATGTGTCCACCGTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
3UTR-3UTR CCA 90 bp ATCAAGTTTCTGTTTTTATTCAGTGCACGAGTAGACGCTATTTCAGTATCAGGCCCAGCCCCAGCCTTGTaGGCTGTCCCGCTGGTGCTG +
Preference number: 2 (lower is better)
Translates to: IKFLFLFSARVDAISVSGPAPAL*AVPLVL
Trigger: CAGCACCAGCGGGACAGCCCACAAGGCTGGGGCTGG...GCCTGATACTGAAATAGCGTCTACTCGTGCACTGAATAAAAACAGAAACTTGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
3UTR-3UTR CCA 90 bp ACCTCATGCAGCAGCAGTCGGCGGGTCATAGGGCCTTTGCTTTCCTGTTCTGTTTCATCTGGTGAAAACTaGTCTCTGTCAAACAGGGTG +
Preference number: 2 (lower is better)
Translates to: TSCSSSRRVIGPLLSCSVSSGEN*SLSNRV
Trigger: CACCCTGTTTGACAGAGACCAGTTTTCACCAGATGA...AACAGAACAGGAAAGCAAAGGCCCTATGACCCGCCGACTGCTGCTGCATGAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427234.5
3UTR-3UTR TCA 90 bp ACAAACAGAGCTGAACATGTGAACACTAGGACAAGGCACTGTACTATGGGGTTTTGGCTTTGTGAGGGGTaGAGCTGCATGGTGCTCCCT +
Preference number: 2 (lower is better)
Translates to: TNRAEHVNTRTRHCTMGFWLCEG*SCMVLP
Trigger: AGGGAGCACCATGCAGCTTCACCCCTCACAAAGCCA...AAACCCCATAGTACAGTGCCTTGTCCTAGTGTTCACATGTTCAGCTCTGTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000427234.5
ENST00000622089.4
3UTR-3UTR TCA 90 bp CGTCCTTCCTTGATGGGGCTCCTGCCACATCCAACGAAGCCATGCGAATGCCCTTTCCGTCACTATTTGTaGATTCACACATCAAAAGTG +
Preference number: 2 (lower is better)
Translates to: RPSLMGLLPHPTKPCECPFRHYL*IHTSKV
Trigger: CACTTTTGATGTGTGAATTCACAAATAGTGACGGAA...AGGGCATTCGCATGGCTTCGTTGGATGTGGCAGGAGCCCCATCAAGGAAGGACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406921.7
3UTR-3UTR GCA 90 bp GGGCCTTTGCTTTCCTGTTCTGTTCGAATTTTTGCCACTGGAATTTCAGTACGAGGTGAAGCTGCATGGTaGTCCCTCAGCCCCAAGAGA +
Preference number: 2 (lower is better)
Translates to: GPLLSCSVRIFATGISVRGEAAW*SLSPKR
Trigger: TCTCTTGGGGCTGAGGGAGCACCATGCAGCTTCACC...TCGTACTGAAATTCCAGTGGCAAAAATTCGAACAGAACAGGAAAGCAAAGGCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427234.5
3UTR-3UTR GCA 90 bp GTGAAGCTGCATGGTGCTCCCTCAGCCCCAAGAGAGCGCAGTCTCTCATTCTCCTTCTGTTCGAATTTTTaGCACTGGAATTTCAGTACG +
Preference number: 2 (lower is better)
Translates to: VKLHGAPSAPRERSLSFSFCSNF*HWNFST
Trigger: CGTACTGAAATTCCAGTGGCAAAAATTCGAACAGAA...GGAGAATGAGAGACTGCGCTCTCTTGGGGCTGAGGGAGCACCATGCAGCTTCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427234.5
3UTR-3UTR CCA 90 bp GCCTTTGCTTTCCTGTTCTGTTCGAATTTTTGCCACTGGAATTTCAGTACGACCTGTCCTGGATGGTCCTaGTGGTGTAGCTCTGGGAGC +
Preference number: 2 (lower is better)
Translates to: AFAFLFCSNFCHWNFSTTCPGWS*WCSSGS
Trigger: GCTCCCAGAGCTACACCACCAGGACCATCCAGGACA...GGTCGTACTGAAATTCCAGTGGCAAAAATTCGAACAGAACAGGAAAGCAAAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427234.5
3UTR-3UTR TCA 90 bp AAGTTTCTGTTTTTATTCAGTGCACGAGTAGACGCTATTTCAGTATCAGGCCGCGCGTGCATGGCTTTGTaGGGGGTGAAGCTGCATGGT +
Preference number: 2 (lower is better)
Translates to: KFLFLFSARVDAISVSGRACMAL*GVKLHG
Trigger: ACCATGCAGCTTCACCCCTCACAAAGCCATGCACGC...GCGGCCTGATACTGAAATAGCGTCTACTCGTGCACTGAATAAAAACAGAAACTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
3UTR-3UTR TCA 90 bp TGCAGCAGCAGTCGGCGGGTCATAGGGCCTTTGCTTTCCTGTTCTGTTCGAATTCAGGAAATCATCTGGTaGAAACTGGTCTCTGTCAAA +
Preference number: 2 (lower is better)
Translates to: CSSSRRVIGPLLSCSVRIQEIIW*KLVSVK
Trigger: TTTGACAGAGACCAGTTTTCACCAGATGATTTCCTG...AATTCGAACAGAACAGGAAAGCAAAGGCCCTATGACCCGCCGACTGCTGCTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427234.5
3UTR-3UTR GCA 90 bp TGCTTTCCTGTTCTGTTCGAATTTTTGCCACTGGAATTTCAGTACGACCCAGGACCATCAGGCGCCCAATaGCTGAAGTCTTTTGGGAGC +
Preference number: 2 (lower is better)
Translates to: CFPVLFEFLPLEFQYDPGPSGAQ*LKSFGS
Trigger: GCTCCCAAAAGACTTCAGGCATTGGGCGCCTGATGG...TCCTGGGTCGTACTGAAATTCCAGTGGCAAAAATTCGAACAGAACAGGAAAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427234.5
3UTR-3UTR TCA 90 bp GTACTATGGGGTTTGGTTTCTTTATGGGAAAGGTGTTTGCATAGATTGCTAGCTTGGCTTTGTGAGGGGTaGAGCTGCATGGTGCTCCCT +
Preference number: 2 (lower is better)
Translates to: VLWGLVSLWERCLHRLLAWLCEG*SCMVLP
Trigger: AGGGAGCACCATGCAGCTTCACCCCTCACAAAGCCA...AGCTAGCAATCTATGCAAACACCTTTCCCATAAAGAAACCAAACCCCATAGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000427234.5
ENST00000622089.4
3UTR-3UTR CCA 90 bp GTCACCAAACCACTCCACGGTGGACACATTCAACCGAGCGGTAACATCTGGTGGGGTTTGGTTTCTTTATaGGAAAGGTGTTTGCATAGA +
Preference number: 2 (lower is better)
Translates to: VTKPLHGGHIQPSGNIWWGLVSL*ERCLHR
Trigger: TCTATGCAAACACCTTTCCCATAAAGAAACCAAACC...CCACCAGATGTTACCGCTCGGTTGAATGTGTCCACCGTGGAGTGGTTTGGTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
3UTR-3UTR CCA 90 bp AAGTTTCTGTTTTTATTCAGTGCACGAGTAGACGCTATTTCAGTATCAGGCCGCCAAACCACTCCACGGTaGACACATTCAACCGAGCGG +
Preference number: 2 (lower is better)
Translates to: KFLFLFSARVDAISVSGRQTTPR*THSTER
Trigger: CCGCTCGGTTGAATGTGTCCACCGTGGAGTGGTTTG...GCGGCCTGATACTGAAATAGCGTCTACTCGTGCACTGAATAAAAACAGAAACTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
3UTR-3UTR CCA 90 bp AAGTTTCTGTTTTTATTCAGTGCACGAGTAGACGCTATTTCAGTATCAGGCCGCCAGAGGTCACTGGCGTaGAATGGTTACAGCGTCACC +
Preference number: 2 (lower is better)
Translates to: KFLFLFSARVDAISVSGRQRSLA*NGYSVT
Trigger: GGTGACGCTGTAACCATTCCACGCCAGTGACCTCTG...GCGGCCTGATACTGAAATAGCGTCTACTCGTGCACTGAATAAAAACAGAAACTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
3UTR-3UTR GCA 90 bp GATGCCTCATTTCCAAGTAATACTTTTTATAGCCCTGAAAATGGAAACCTTGGCGGTGAAGCTGCATGGTaGTCCCTCAGCCCCAAGAGA +
Preference number: 2 (lower is better)
Translates to: DASFPSNTFYSPENGNLGGEAAW*SLSPKR
Trigger: TCTCTTGGGGCTGAGGGAGCACCATGCAGCTTCACC...GCCAAGGTTTCCATTTTCAGGGCTATAAAAAGTATTACTTGGAAATGAGGCATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000427234.5
ENST00000622089.4
3UTR-3UTR CCA 90 bp AGTCGGCGGGTCATAGGGCCTTTGCTTTCCTGTTCTGTTCGAATTTTTGCCACTGCTGATTTCACAGTATaGGTTGCTCTTTCCATTTGG +
Preference number: 2 (lower is better)
Translates to: SRRVIGPLLSCSVRIFATADFTV*VALSIW
Trigger: CCAAATGGAAAGAGCAACCCATACTGTGAAATCAGC...AGTGGCAAAAATTCGAACAGAACAGGAAAGCAAAGGCCCTATGACCCGCCGACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427234.5
3UTR-3UTR GCA 90 bp CAAGCACAAATCATTTTAAAGTGCTACTCGAATAAGGATAGCTGTCATCAGCGTAAGGAAGCTACGGTCTaGCATAGGCCCTTCCCATCC +
Preference number: 2 (lower is better)
Translates to: QAQIILKCYSNKDSCHQRKEATV*HRPFPS
Trigger: GGATGGGAAGGGCCTATGGCAGACCGTAGCTTCCTT...ACGCTGATGACAGCTATCCTTATTCGAGTAGCACTTTAAAATGATTTGTGCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406921.7
3UTR-3UTR CCA 90 bp GATCAAGTTTCTGTTTTTATTCAGTGCACGAGTAGACGCTATTTCAGTATCAGGCAAACCACTCCACGGTaGACACATTCAACCGAGCGG +
Preference number: 2 (lower is better)
Translates to: DQVSVFIQCTSRRYFSIRQTTPR*THSTER
Trigger: CCGCTCGGTTGAATGTGTCCACCGTGGAGTGGTTTG...CCTGATACTGAAATAGCGTCTACTCGTGCACTGAATAAAAACAGAAACTTGATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
3UTR-3UTR TCA 90 bp TTGTTCACTCAAGCACAAATCATTTTAAAGTGCTACTCGAATAAGGATAGCTGTCCGCTTCACTCTGAGTaGCCTCATCTGGGGGAAAGA +
Preference number: 2 (lower is better)
Translates to: LFTQAQIILKCYSNKDSCPLHSE*PHLGER
Trigger: TCTTTCCCCCAGATGAGGTCACTCAGAGTGAAGCGG...ACAGCTATCCTTATTCGAGTAGCACTTTAAAATGATTTGTGCTTGAGTGAACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406921.7
3UTR-3UTR TCA 90 bp TTAAAGTGCTACTCGAATAAGGATAGCTGTCATCAGCGTAGAGGTCACTGGTATTTCACACATCAAAAGTaGTGCCTTGCTTTGACTCTG +
Preference number: 2 (lower is better)
Translates to: LKCYSNKDSCHQRRGHWYFTHQK*CLALTL
Trigger: CAGAGTCAAAGCAAGGCATCACTTTTGATGTGTGAA...ATACCAGTGACCTCTACGCTGATGACAGCTATCCTTATTCGAGTAGCACTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406921.7
3UTR-3UTR GCA 90 bp GATCAAGTTTCTGTTTTTATTCAGTGCACGAGTAGACGCTATTTCAGTATCAGGGCTAGCTATTTAGTGTaGAGGAAAACAGAGCCCCCA +
Preference number: 2 (lower is better)
Translates to: DQVSVFIQCTSRRYFSIRASYLV*RKTEPP
Trigger: TGGGGGCTCTGTTTTCCTGCACACTAAATAGCTAGC...CCTGATACTGAAATAGCGTCTACTCGTGCACTGAATAAAAACAGAAACTTGATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
3UTR-3UTR CCA 90 bp CTCTTTCTGTACATATGGGCAATGATAAAGCTTAAAGATGCATGTCCTAAGAAAGTCACTGGCGTGGAATaGTTACAGCGTCACCAAACC +
Preference number: 2 (lower is better)
Translates to: LFLYIWAMIKLKDACPKKVTGVE*LQRHQT
Trigger: GGTTTGGTGACGCTGTAACCATTCCACGCCAGTGAC...TTTCTTAGGACATGCATCTTTAAGCTTTATCATTGCCCATATGTACAGAAAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
3UTR-3UTR TCA 90 bp AAGTGCTACTCGAATAAGGATAGCTGTCATCAGCGTAGAGGTCACTGGTATAAAAAACTGATACAACCATaGGGTGAACACTTTCACTGT +
Preference number: 2 (lower is better)
Translates to: KCYSNKDSCHQRRGHWYKKLIQP*GEHFHC
Trigger: ACAGTGAAAGTGTTCACCTCATGGTTGTATCAGTTT...TTTATACCAGTGACCTCTACGCTGATGACAGCTATCCTTATTCGAGTAGCACTT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000406921.7
3UTR-3UTR GCA 90 bp GATGCCTCATTTCCAAGTAATACTTTTTATAGCCCTGAAAATGGAAACCTTGGCTTTCACAGTATGGGTTaGTCTTTCCATTTGGTTTGC +
Preference number: 2 (lower is better)
Translates to: DASFPSNTFYSPENGNLGFHSMG*SFHLVC
Trigger: GCAAACCAAATGGAAAGAGCAACCCATACTGTGAAA...GCCAAGGTTTCCATTTTCAGGGCTATAAAAAGTATTACTTGGAAATGAGGCATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427234.5
3UTR CCA 72 bp CCCAGCGTGCATGGCTTTGTGAGGGGTGAAGCTGCATaGTGCTCCCTCAGCCCCAAGAGAGCGCAGTCTCTC +
Preference number: 3 (lower is better)
Translates to: PSVHGFVRGEAA*CSLSPKRAQSL
Trigger: GAGAGACTGCGCTCTCTTGGGGCTGAGGGAGCACCATGCAGCTTCACCCCTCACAAAGCCATGCACGCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000427234.5
ENST00000622089.4
3UTR-3UTR CAA 90 bp TGCAGCAGCAGTCGGCGGGTCATAGGGCCTTTGCTTTCCTGTTCTGTTCGAATTTCTCCAGCCCCAGCCTaGTGGGCTGTCCCGCTGGTG +
Preference number: 3 (lower is better)
Translates to: CSSSRRVIGPLLSCSVRISPAPA*WAVPLV
Trigger: CACCAGCGGGACAGCCCACAAGGCTGGGGCTGGAGA...AATTCGAACAGAACAGGAAAGCAAAGGCCCTATGACCCGCCGACTGCTGCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427234.5
3UTR-3UTR CAA 90 bp CCAGCCCCAGCCTTGTGGGCTGTCCCGCTGGTGCTGTCCTTTAGAACCCCTACACTTTTGGGAGCGGGCTaGGTAAGCTTTCTCACGCTT +
Preference number: 3 (lower is better)
Translates to: PAPALWAVPLVLSFRTPTLLGAG*VSFLTL
Trigger: AAGCGTGAGAAAGCTTACCAAGCCCGCTCCCAAAAG...TGTAGGGGTTCTAAAGGACAGCACCAGCGGGACAGCCCACAAGGCTGGGGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000427234.5
3UTR CCA 72 bp AGTGGCTGTGACCCAGCAGAGGTCACTGGCGTGGAATaGTTACAGCGTCACCAAACCACTCCACGGTGGACA +
Preference number: 3 (lower is better)
Translates to: SGCDPAEVTGVE*LQRHQTTPRWT
Trigger: TGTCCACCGTGGAGTGGTTTGGTGACGCTGTAACCATTCCACGCCAGTGACCTCTGCTGGGTCACAGCCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
3UTR-3UTR CAA 90 bp CGTCCTTCCTTGATGGGGCTCCTGCCACATCCAACGAAGCCATGCGAATGCCCTAGGCAGAGACAGCATTaGGAGGATGTGAGAGCTTCC +
Preference number: 3 (lower is better)
Translates to: RPSLMGLLPHPTKPCECPRQRQH*EDVRAS
Trigger: GGAAGCTCTCACATCCTCCAAATGCTGTCTCTGCCT...AGGGCATTCGCATGGCTTCGTTGGATGTGGCAGGAGCCCCATCAAGGAAGGACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406921.7
3UTR-3UTR CAA 90 bp ACCCAGACCTCCCCGGTGGGGACCTCATGCAGCAGCAGTCGGCGGGTCATAGGGCTCTTTCCATTTGGTTaGCAGGCTTTTAATTCTGTA +
Preference number: 3 (lower is better)
Translates to: TQTSPVGTSCSSSRRVIGLFPFG*QAFNSV
Trigger: TACAGAATTAAAAGCCTGCAAACCAAATGGAAAGAG...CCCTATGACCCGCCGACTGCTGCTGCATGAGGTCCCCACCGGGGAGGTCTGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000427234.5
3UTR TCA 72 bp GCCATGCGAATGCCCTCTTGTTCTCCCGCTTCACTCTaGGTGACCTCATCTGGGGGAAAGAGCTCATTAGAG +
Preference number: 3 (lower is better)
Translates to: AMRMPSCSPASL*VTSSGGKSSLE
Trigger: CTCTAATGAGCTCTTTCCCCCAGATGAGGTCACTCAGAGTGAAGCGGGAGAACAAGAGGGCATTCGCATGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406921.7
3UTR-3UTR CAA 90 bp GAAGCTGCATGGTGCTCCCTCAGCCCCAAGAGAGCGCAGTCTCTCATTCTCCAGCAGTTAAAATTCCACTaGGGATTGAGTGTGTCCTGG +
Preference number: 3 (lower is better)
Translates to: EAAWCSLSPKRAQSLILQQLKFH*GLSVSW
Trigger: CCAGGACACACTCAATCCCAAGTGGAATTTTAACTG...CTGGAGAATGAGAGACTGCGCTCTCTTGGGGCTGAGGGAGCACCATGCAGCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427234.5
3UTR TCA 72 bp AGCTTCAATGACATGCACCATCAGGCGCCCAATGCCTaGAGTCTTTTGGGAGCGGGCTTGGTAAGCTTTCTC +
Preference number: 3 (lower is better)
Translates to: SFNDMHHQAPNA*SLLGAGLVSFL
Trigger: GAGAAAGCTTACCAAGCCCGCTCCCAAAAGACTTCAGGCATTGGGCGCCTGATGGTGCATGTCATTGAAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427234.5
3UTR-3UTR CAA 90 bp GATGCCTCATTTCCAAGTAATACTTTTTATAGCCCTGAAAATGGAAACCTTGGCTCTCCAGCCCCAGCCTaGTGGGCTGTCCCGCTGGTG +
Preference number: 3 (lower is better)
Translates to: DASFPSNTFYSPENGNLGSPAPA*WAVPLV
Trigger: CACCAGCGGGACAGCCCACAAGGCTGGGGCTGGAGA...GCCAAGGTTTCCATTTTCAGGGCTATAAAAAGTATTACTTGGAAATGAGGCATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000427234.5
ENST00000622089.4
3UTR-3UTR CAA 90 bp CCCAGCAGAGGTCACTGGCGTGGAATGGTTACAGCGTCACCAAACCACTCCACGCTGAAAATGGAAACCTaGGCATCTAAACAAACAGAG +
Preference number: 3 (lower is better)
Translates to: PSRGHWRGMVTASPNHSTLKMET*ASKQTE
Trigger: CTCTGTTTGTTTAGATGCCAAGGTTTCCATTTTCAG...CGTGGAGTGGTTTGGTGACGCTGTAACCATTCCACGCCAGTGACCTCTGCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
3UTR-3UTR CAA 90 bp TGCACGAGTAGACGCTATTTCAGTATCAGGCCGCGCCAAGTGTCGAGGCTGCAGCTGAAAATGGAAACCTaGGCATCTAAACAAACAGAG +
Preference number: 3 (lower is better)
Translates to: CTSRRYFSIRPRQVSRLQLKMET*ASKQTE
Trigger: CTCTGTTTGTTTAGATGCCAAGGTTTCCATTTTCAG...CTGCAGCCTCGACACTTGGCGCGGCCTGATACTGAAATAGCGTCTACTCGTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
3UTR-3UTR CAA 90 bp ATGATCAAGTTTCTGTTTTTATTCAGTGCACGAGTAGACGCTATTTCAGTATCATCTCCAGCCCCAGCCTaGTGGGCTGTCCCGCTGGTG +
Preference number: 3 (lower is better)
Translates to: MIKFLFLFSARVDAISVSSPAPA*WAVPLV
Trigger: CACCAGCGGGACAGCCCACAAGGCTGGGGCTGGAGA...TGATACTGAAATAGCGTCTACTCGTGCACTGAATAAAAACAGAAACTTGATCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
3UTR TCA 72 bp GCTTCCGTCACTATTTGTGAATTCACACATCAAAAGTaGTGCCTTGCTTTGACTCTGCGTGGAGGCAGCCCT +
Preference number: 3 (lower is better)
Translates to: ASVTICEFTHQK*CLALTLRGGSP
Trigger: AGGGCTGCCTCCACGCAGAGTCAAAGCAAGGCATCACTTTTGATGTGTGAATTCACAAATAGTGACGGAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406921.7
3UTR-3UTR CAA 90 bp CAGCAGCAGTCGGCGGGTCATAGGGCCTTTGCTTTCCTGTTCTGTTCGAATTTTCTGAAAATGGAAACCTaGGCATCTAAACAAACAGAG +
Preference number: 3 (lower is better)
Translates to: QQQSAGHRAFAFLFCSNFLKMET*ASKQTE
Trigger: CTCTGTTTGTTTAGATGCCAAGGTTTCCATTTTCAG...AAAATTCGAACAGAACAGGAAAGCAAAGGCCCTATGACCCGCCGACTGCTGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427234.5
3UTR-3UTR CAA 90 bp CAAGCACAAATCATTTTAAAGTGCTACTCGAATAAGGATAGCTGTCATCAGCGTTATCCCCGTCCTTCCTaGATGGGGCTCCTGCCACAT +
Preference number: 3 (lower is better)
Translates to: QAQIILKCYSNKDSCHQRYPRPS*MGLLPH
Trigger: ATGTGGCAGGAGCCCCATCAAGGAAGGACGGGGATA...ACGCTGATGACAGCTATCCTTATTCGAGTAGCACTTTAAAATGATTTGTGCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000406921.7
3UTR GCA 72 bp GGTTTGCAGGCTTTTAATTCTGTAGCTTCAATGACATaGACCATCAGGCGCCCAATGCCTGAAGTCTTTTGG +
Preference number: 3 (lower is better)
Translates to: GLQAFNSVASMT*TIRRPMPEVFW
Trigger: CCAAAAGACTTCAGGCATTGGGCGCCTGATGGTGCATGTCATTGAAGCTACAGAATTAAAAGCCTGCAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427234.5
ENST00000449392.1
3UTR CCA 72 bp CTCCACGGTGGACACATTCAACCGAGCGGTAACATCTaGTGGTCTGATGCCTCATTTCCAAGTAATACTTTT +
Preference number: 3 (lower is better)
Translates to: LHGGHIQPSGNI*WSDASFPSNTF
Trigger: AAAAGTATTACTTGGAAATGAGGCATCAGACCACCAGATGTTACCGCTCGGTTGAATGTGTCCACCGTGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
3UTR TCA 72 bp GCATTTGGAGGATGTGAGAGCTTCCGTCACTATTTGTaGATTCACACATCAAAAGTGATGCCTTGCTTTGAC +
Preference number: 3 (lower is better)
Translates to: AFGGCESFRHYL*IHTSKVMPCFD
Trigger: GTCAAAGCAAGGCATCACTTTTGATGTGTGAATTCACAAATAGTGACGGAAGCTCTCACATCCTCCAAATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406921.7
3UTR TCA 72 bp TCCCATTGGGTTTTCCAAACTGATACAACCATGAGGTaGACACTTTCACTGTTTCACAGTTCCTCCAGAGAT +
Preference number: 3 (lower is better)
Translates to: SHWVFQTDTTMR*TLSLFHSSSRD
Trigger: ATCTCTGGAGGAACTGTGAAACAGTGAAAGTGTTCACCTCATGGTTGTATCAGTTTGGAAAACCCAATGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406921.7
3UTR-3UTR CAA 90 bp GATGCCTCATTTCCAAGTAATACTTTTTATAGCCCTGAAAATGGAAACCTTGGCACTGTACTATGGGGTTaGGTTTCTTTATGGGAAAGG +
Preference number: 3 (lower is better)
Translates to: DASFPSNTFYSPENGNLGTVLWG*VSLWER
Trigger: CCTTTCCCATAAAGAAACCAAACCCCATAGTACAGT...GCCAAGGTTTCCATTTTCAGGGCTATAAAAAGTATTACTTGGAAATGAGGCATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000427234.5
ENST00000622089.4
3UTR-3UTR CAA 90 bp GATGCCTCATTTCCAAGTAATACTTTTTATAGCCCTGAAAATGGAAACCTTGGCTTATGGGAAAGGTGTTaGCATAGATTGCTAGCTATT +
Preference number: 3 (lower is better)
Translates to: DASFPSNTFYSPENGNLGLWERC*HRLLAI
Trigger: AATAGCTAGCAATCTATGCAAACACCTTTCCCATAA...GCCAAGGTTTCCATTTTCAGGGCTATAAAAAGTATTACTTGGAAATGAGGCATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000427234.5
ENST00000622089.4
3UTR TCA 72 bp TCACTGTTTCACAGTTCCTCCAGAGATACCAGTTTATaGAAATGTCAGATGTTAAAACAGATATTAGGCAAA +
Preference number: 3 (lower is better)
Translates to: SLFHSSSRDTSL*KCQMLKQILGK
Trigger: TTTGCCTAATATCTGTTTTAACATCTGACATTTTCATAAACTGGTATCTCTGGAGGAACTGTGAAACAGTGA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS-3UTR CCA 90 bp CCAAGAGAGCGCAGTCTCTCATTCTCCAGCCCCAGCCTTGTGGGCTGTCCCGCTCCACTGCAGCTGGCTTaGTCGTCAGGCCGCCGCCCG +
Preference number: 4 (lower is better)
Translates to: PRERSLSFSSPSLVGCPAPLQLA*SSGRRP
Trigger: CGGGCGGCGGCCTGACGACCAAGCCAGCTGCAGTGG...AGCGGGACAGCCCACAAGGCTGGGGCTGGAGAATGAGAGACTGCGCTCTCTTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355123.9
CDS-3UTR GCA 90 bp CCAAGAGAGCGCAGTCTCTCATTCTCCAGCCCCAGCCTTGTGGGCTGTCCCGCTCGCCGTCGCCGCCACTaGAGCTGGCTTGGTCGTCAG +
Preference number: 4 (lower is better)
Translates to: PRERSLSFSSPSLVGCPARRRRH*SWLGRQ
Trigger: CTGACGACCAAGCCAGCTGCAGTGGCGGCGACGGCG...AGCGGGACAGCCCACAAGGCTGGGGCTGGAGAATGAGAGACTGCGCTCTCTTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355123.9
CDS-3UTR GCA 90 bp GTGAAGCTGCATGGTGCTCCCTCAGCCCCAAGAGAGCGCAGTCTCTCATTCTCCGGGGAGACCCTGCTCTaGCGCCGTCGCCGCCACTGC +
Preference number: 4 (lower is better)
Translates to: VKLHGAPSAPRERSLSFSGETLL*RRRRHC
Trigger: GCAGTGGCGGCGACGGCGGCAGAGCAGGGTCTCCCC...GGAGAATGAGAGACTGCGCTCTCTTGGGGCTGAGGGAGCACCATGCAGCTTCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355123.9
CDS-3UTR TCA 90 bp CCAAGAGAGCGCAGTCTCTCATTCTCCAGCCCCAGCCTTGTGGGCTGTCCCGCTGCTCAGACGCCGCCTTaGTCTTCTGCACCCAGGCGG +
Preference number: 4 (lower is better)
Translates to: PRERSLSFSSPSLVGCPAAQTPP*SSAPRR
Trigger: CCGCCTGGGTGCAGAAGATCAAGGCGGCGTCTGAGC...AGCGGGACAGCCCACAAGGCTGGGGCTGGAGAATGAGAGACTGCGCTCTCTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000427234.5
ENST00000622089.4
CDS-3UTR TCA 90 bp GCGCAGTCTCTCATTCTCCAGCCCCAGCCTTGTGGGCTGTCCCGCTGGTGCTGTCAGGCGCCCAATGCCTaGAGTCTTTTGGGAGCGGGC +
Preference number: 4 (lower is better)
Translates to: AQSLILQPQPCGLSRWCCQAPNA*SLLGAG
Trigger: GCCCGCTCCCAAAAGACTTCAGGCATTGGGCGCCTG...ACAGCACCAGCGGGACAGCCCACAAGGCTGGGGCTGGAGAATGAGAGACTGCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000427234.5
ENST00000622089.4
CDS-3UTR GCA 90 bp ACCCAGACCTCCCCGGTGGGGACCTCATGCAGCAGCAGTCGGCGGGTCATAGGGGGGCTGTCCCGCTGGTaGTGTCCTTTAGAACCCCTA +
Preference number: 4 (lower is better)
Translates to: TQTSPVGTSCSSSRRVIGGLSRW*CPLEPL
Trigger: TAGGGGTTCTAAAGGACAGCACCAGCGGGACAGCCC...CCCTATGACCCGCCGACTGCTGCTGCATGAGGTCCCCACCGGGGAGGTCTGGGT
64% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000427234.5
CDS-3UTR GCA 90 bp CCAAGAGAGCGCAGTCTCTCATTCTCCAGCCCCAGCCTTGTGGGCTGTCCCGCTAGAGCACAGCTCCTCTaGCCGCTCGAGGGCCAGCTT +
Preference number: 4 (lower is better)
Translates to: PRERSLSFSSPSLVGCPARAQLL*PLEGQL
Trigger: AAGCTGGCCCTCGAGCGGGCAGAGGAGCTGTGCTCT...AGCGGGACAGCCCACAAGGCTGGGGCTGGAGAATGAGAGACTGCGCTCTCTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CCA 90 bp GTGAAGCTGCATGGTGCTCCCTCAGCCCCAAGAGAGCGCAGTCTCTCATTCTCCCCAGCCCCAGCCTTGTaGGCTGTCCCGCTGGTGCTG +
Preference number: 4 (lower is better)
Translates to: VKLHGAPSAPRERSLSFSPAPAL*AVPLVL
Trigger: CAGCACCAGCGGGACAGCCCACAAGGCTGGGGCTGG...GGAGAATGAGAGACTGCGCTCTCTTGGGGCTGAGGGAGCACCATGCAGCTTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000427234.5
ENST00000622089.4
CDS-3UTR TCA 90 bp AGCGCAGTCTCTCATTCTCCAGCCCCAGCCTTGTGGGCTGTCCCGCTGGTGCTGGCAGTGGGTAGCGGGTaGTCCTCTGCATGGGTTTCA +
Preference number: 4 (lower is better)
Translates to: SAVSHSPAPALWAVPLVLAVGSG*SSAWVS
Trigger: TGAAACCCATGCAGAGGATCACCCGCTACCCACTGC...CAGCACCAGCGGGACAGCCCACAAGGCTGGGGCTGGAGAATGAGAGACTGCGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR GCA 90 bp CTCCTGCCACATCCAACGAAGCCATGCGAATGCCCTCTTGTTCTCCCGCTTCACCGCCGTCGCCGCCACTaGAGCTGGCTTGGTCGTCAG +
Preference number: 4 (lower is better)
Translates to: LLPHPTKPCECPLVLPLHRRRRH*SWLGRQ
Trigger: CTGACGACCAAGCCAGCTGCAGTGGCGGCGACGGCG...GTGAAGCGGGAGAACAAGAGGGCATTCGCATGGCTTCGTTGGATGTGGCAGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS-3UTR CCA 90 bp CCCAAGAGAGCGCAGTCTCTCATTCTCCAGCCCCAGCCTTGTGGGCTGTCCCGCTGTCCTGGATGGTCCTaGTGGTGTAGCTCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: PKRAQSLILQPQPCGLSRCPGWS*WCSSGS
Trigger: GCTCCCAGAGCTACACCACCAGGACCATCCAGGACA...GCGGGACAGCCCACAAGGCTGGGGCTGGAGAATGAGAGACTGCGCTCTCTTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000427234.5
ENST00000622089.4
CDS-3UTR CCA 90 bp CCTCAGCCCCAAGAGAGCGCAGTCTCTCATTCTCCAGCCCCAGCCTTGTGGGCTAGGGGTGAAGCTGCATaGTGCTCCCTCAGCCCCAAG +
Preference number: 4 (lower is better)
Translates to: PQPQESAVSHSPAPALWARGEAA*CSLSPK
Trigger: CTTGGGGCTGAGGGAGCACCATGCAGCTTCACCCCT...AGCCCACAAGGCTGGGGCTGGAGAATGAGAGACTGCGCTCTCTTGGGGCTGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000427234.5
ENST00000622089.4
CDS-3UTR CCA 90 bp GCGCAGTCTCTCATTCTCCAGCCCCAGCCTTGTGGGCTGTCCCGCTGGTGCTGTCCCAGCAGAGGTCACTaGCGTGGAATGGTTACAGCG +
Preference number: 4 (lower is better)
Translates to: AQSLILQPQPCGLSRWCCPSRGH*RGMVTA
Trigger: CGCTGTAACCATTCCACGCCAGTGACCTCTGCTGGG...ACAGCACCAGCGGGACAGCCCACAAGGCTGGGGCTGGAGAATGAGAGACTGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR TCA 90 bp CCAAGAGAGCGCAGTCTCTCATTCTCCAGCCCCAGCCTTGTGGGCTGTCCCGCTGCTGGAGGCAATGGCTaGGGAATGGACAGATTGGGC +
Preference number: 4 (lower is better)
Translates to: PRERSLSFSSPSLVGCPAAGGNG*GMDRLG
Trigger: GCCCAATCTGTCCATTCCTCAGCCATTGCCTCCAGC...AGCGGGACAGCCCACAAGGCTGGGGCTGGAGAATGAGAGACTGCGCTCTCTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR TCA 90 bp GCGCAGTCTCTCATTCTCCAGCCCCAGCCTTGTGGGCTGTCCCGCTGGTGCTGTGACCAGTCACCCCGTTaGTCTCTCCTTGCCACCAAT +
Preference number: 4 (lower is better)
Translates to: AQSLILQPQPCGLSRWCCDQSPR*SLLATN
Trigger: ATTGGTGGCAAGGAGAGATCAACGGGGTGACTGGTC...ACAGCACCAGCGGGACAGCCCACAAGGCTGGGGCTGGAGAATGAGAGACTGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR TCA 90 bp GAGCGCAGTCTCTCATTCTCCAGCCCCAGCCTTGTGGGCTGTCCCGCTGGTGCTCCATCTCCCCTTCAGTaGGAAAGCCTGACTCTGCCA +
Preference number: 4 (lower is better)
Translates to: ERSLSFSSPSLVGCPAGAPSPLQ*ESLTLP
Trigger: TGGCAGAGTCAGGCTTTCTCACTGAAGGGGAGATGG...AGCACCAGCGGGACAGCCCACAAGGCTGGGGCTGGAGAATGAGAGACTGCGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR TCA 90 bp AGCGCAGTCTCTCATTCTCCAGCCCCAGCCTTGTGGGCTGTCCCGCTGGTGCTGACTCCCTCATTCACTTaGGAGCACAGCTCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: SAVSHSPAPALWAVPLVLTPSFT*EHSSSA
Trigger: GGCAGAGGAGCTGTGCTCTCAAGTGAATGAGGGAGT...CAGCACCAGCGGGACAGCCCACAAGGCTGGGGCTGGAGAATGAGAGACTGCGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR TCA 90 bp CTTCCCCTCCTGAGTGGCTGTGACCCAGCAGAGGTCACTGGCGTGGAATGGTTACAGGCGCCCAATGCCTaGAGTCTTTTGGGAGCGGGC +
Preference number: 4 (lower is better)
Translates to: LPLLSGCDPAEVTGVEWLQAPNA*SLLGAG
Trigger: GCCCGCTCCCAAAAGACTTCAGGCATTGGGCGCCTG...TAACCATTCCACGCCAGTGACCTCTGCTGGGTCACAGCCACTCAGGAGGGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR TCA 90 bp CCAGCCCCAGCCTTGTGGGCTGTCCCGCTGGTGCTGTCCTTTAGAACCCCTACAGCGTGCATGGCTTTGTaGGGGGTGAAGCTGCATGGT +
Preference number: 4 (lower is better)
Translates to: PAPALWAVPLVLSFRTPTACMAL*GVKLHG
Trigger: ACCATGCAGCTTCACCCCTCACAAAGCCATGCACGC...TGTAGGGGTTCTAAAGGACAGCACCAGCGGGACAGCCCACAAGGCTGGGGCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000427234.5
CDS-3UTR TCA 90 bp CTGCATGGTGCTCCCTCAGCCCCAAGAGAGCGCAGTCTCTCATTCTCCAGCCCCGCGTGCATGGCTTTGTaGGGGGTGAAGCTGCATGGT +
Preference number: 4 (lower is better)
Translates to: LHGAPSAPRERSLSFSSPACMAL*GVKLHG
Trigger: ACCATGCAGCTTCACCCCTCACAAAGCCATGCACGC...GGGGCTGGAGAATGAGAGACTGCGCTCTCTTGGGGCTGAGGGAGCACCATGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000427234.5
ENST00000622089.4
CDS-3UTR GCA 90 bp TGCACGAGTAGACGCTATTTCAGTATCAGGCCGCGCCAAGTGTCGAGGCTGCAGCGCCCGCGAACCTGTTaGGTAGCCTGTCACAGCCGC +
Preference number: 4 (lower is better)
Translates to: CTSRRYFSIRPRQVSRLQRPRTC*VACHSR
Trigger: GCGGCTGTGACAGGCTACGCAACAGGTTCGCGGGCG...CTGCAGCCTCGACACTTGGCGCGGCCTGATACTGAAATAGCGTCTACTCGTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355123.9
CDS-3UTR GCA 90 bp GAAGCTGCATGGTGCTCCCTCAGCCCCAAGAGAGCGCAGTCTCTCATTCTCCAGAGAGCACAGCTCCTCTaGCCGCTCGAGGGCCAGCTT +
Preference number: 4 (lower is better)
Translates to: EAAWCSLSPKRAQSLILQRAQLL*PLEGQL
Trigger: AAGCTGGCCCTCGAGCGGGCAGAGGAGCTGTGCTCT...CTGGAGAATGAGAGACTGCGCTCTCTTGGGGCTGAGGGAGCACCATGCAGCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR GCA 90 bp CCCAGCAGAGGTCACTGGCGTGGAATGGTTACAGCGTCACCAAACCACTCCACGAGAGCACAGCTCCTCTaGCCGCTCGAGGGCCAGCTT +
Preference number: 4 (lower is better)
Translates to: PSRGHWRGMVTASPNHSTRAQLL*PLEGQL
Trigger: AAGCTGGCCCTCGAGCGGGCAGAGGAGCTGTGCTCT...CGTGGAGTGGTTTGGTGACGCTGTAACCATTCCACGCCAGTGACCTCTGCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR GCA 90 bp CCCAAGAGAGCGCAGTCTCTCATTCTCCAGCCCCAGCCTTGTGGGCTGTCCCGCTCGGTGTCGATGTACTaGTCAGACGCCGCCTTGATC +
Preference number: 4 (lower is better)
Translates to: PKRAQSLILQPQPCGLSRSVSMY*SDAALI
Trigger: GATCAAGGCGGCGTCTGAGCAGTACATCGACACCGA...GCGGGACAGCCCACAAGGCTGGGGCTGGAGAATGAGAGACTGCGCTCTCTTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000427234.5
ENST00000622089.4
CDS-3UTR GCA 90 bp AGCGCAGTCTCTCATTCTCCAGCCCCAGCCTTGTGGGCTGTCCCGCTGGTGCTGCCATCAGGCGCCCAATaGCTGAAGTCTTTTGGGAGC +
Preference number: 4 (lower is better)
Translates to: SAVSHSPAPALWAVPLVLPSGAQ*LKSFGS
Trigger: GCTCCCAAAAGACTTCAGGCATTGGGCGCCTGATGG...CAGCACCAGCGGGACAGCCCACAAGGCTGGGGCTGGAGAATGAGAGACTGCGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000427234.5
ENST00000622089.4
CDS-3UTR GCA 90 bp ACCTCATGCAGCAGCAGTCGGCGGGTCATAGGGCCTTTGCTTTCCTGTTCTGTTCCGGTGGGGACCTCATaGAGCAGCAGTCGGCGGGTC +
Preference number: 4 (lower is better)
Translates to: TSCSSSRRVIGPLLSCSVPVGTS*SSSRRV
Trigger: GACCCGCCGACTGCTGCTGCATGAGGTCCCCACCGG...AACAGAACAGGAAAGCAAAGGCCCTATGACCCGCCGACTGCTGCTGCATGAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427234.5
CDS-3UTR GCA 90 bp GTGCTCCCTCAGCCCCAAGAGAGCGCAGTCTCTCATTCTCCAGCCCCAGCCTTGGGGCTGTCCCGCTGGTaGTGTCCTTTAGAACCCCTA +
Preference number: 4 (lower is better)
Translates to: VLPQPQESAVSHSPAPALGLSRW*CPLEPL
Trigger: TAGGGGTTCTAAAGGACAGCACCAGCGGGACAGCCC...CAAGGCTGGGGCTGGAGAATGAGAGACTGCGCTCTCTTGGGGCTGAGGGAGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000427234.5
ENST00000622089.4
CDS-3UTR GCA 90 bp CCAGCCCCAGCCTTGTGGGCTGTCCCGCTGGTGCTGTCCTTTAGAACCCCTACAGCCGCCTTGATCTTCTaGACCCAGGCGGTCCGTTTT +
Preference number: 4 (lower is better)
Translates to: PAPALWAVPLVLSFRTPTAALIF*TQAVRF
Trigger: AAAACGGACCGCCTGGGTGCAGAAGATCAAGGCGGC...TGTAGGGGTTCTAAAGGACAGCACCAGCGGGACAGCCCACAAGGCTGGGGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427234.5
CDS-3UTR CCA 90 bp GCGCAGTCTCTCATTCTCCAGCCCCAGCCTTGTGGGCTGTCCCGCTGGTGCTGTTGCTCCATCAAGGCTTaGCGTCGCTTTTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: AQSLILQPQPCGLSRWCCCSIKA*RRFSSS
Trigger: GGAGCTGGAAAAGCGACGCCAAGCCTTGATGGAGCA...ACAGCACCAGCGGGACAGCCCACAAGGCTGGGGCTGGAGAATGAGAGACTGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR TCA 90 bp CTCTATCCCCGTCCTTCCTTGATGGGGCTCCTGCCACATCCAACGAAGCCATGCACCTCGACGACGAGCTaGAGGTCAGCCATGTACCGC +
Preference number: 4 (lower is better)
Translates to: LYPRPSLMGLLPHPTKPCTSTTS*RSAMYR
Trigger: GCGGTACATGGCTGACCTTCAGCTCGTCGTCGAGGT...GCATGGCTTCGTTGGATGTGGCAGGAGCCCCATCAAGGAAGGACGGGGATAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS-3UTR GCA 90 bp CTGCATGGTGCTCCCTCAGCCCCAAGAGAGCGCAGTCTCTCATTCTCCAGCCCCGCCTCCCTTTGTTGCTaGTCCATCAAGGCTTGGCGT +
Preference number: 4 (lower is better)
Translates to: LHGAPSAPRERSLSFSSPASLCC*SIKAWR
Trigger: ACGCCAAGCCTTGATGGAGCAGCAACAAAGGGAGGC...GGGGCTGGAGAATGAGAGACTGCGCTCTCTTGGGGCTGAGGGAGCACCATGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR GCA 90 bp GTGCTCCCTCAGCCCCAAGAGAGCGCAGTCTCTCATTCTCCAGCCCCAGCCTTGTCGGTGTCGATGTACTaGTCAGACGCCGCCTTGATC +
Preference number: 4 (lower is better)
Translates to: VLPQPQESAVSHSPAPALSVSMY*SDAALI
Trigger: GATCAAGGCGGCGTCTGAGCAGTACATCGACACCGA...CAAGGCTGGGGCTGGAGAATGAGAGACTGCGCTCTCTTGGGGCTGAGGGAGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000427234.5
ENST00000622089.4
CDS-3UTR GCA 90 bp GTGCTCCCTCAGCCCCAAGAGAGCGCAGTCTCTCATTCTCCAGCCCCAGCCTTGCCATCAGGCGCCCAATaGCTGAAGTCTTTTGGGAGC +
Preference number: 4 (lower is better)
Translates to: VLPQPQESAVSHSPAPALPSGAQ*LKSFGS
Trigger: GCTCCCAAAAGACTTCAGGCATTGGGCGCCTGATGG...CAAGGCTGGGGCTGGAGAATGAGAGACTGCGCTCTCTTGGGGCTGAGGGAGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000427234.5
ENST00000622089.4
CDS-3UTR GCA 90 bp ACAGCGTCACCAAACCACTCCACGGTGGACACATTCAACCGAGCGGTAACATCTCCGGTGGGGACCTCATaGAGCAGCAGTCGGCGGGTC +
Preference number: 4 (lower is better)
Translates to: TASPNHSTVDTFNRAVTSPVGTS*SSSRRV
Trigger: GACCCGCCGACTGCTGCTGCATGAGGTCCCCACCGG...AGATGTTACCGCTCGGTTGAATGTGTCCACCGTGGAGTGGTTTGGTGACGCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CCA 90 bp TCTCAAGCATTATCCGGCAGGCAGAGACAGCATTTGGAGGATGTGAGAGCTTCCCGCCGCCACTGCAGCTaGCTTGGTCGTCAGGCCGCC +
Preference number: 4 (lower is better)
Translates to: SQALSGRQRQHLEDVRASRRHCS*LGRQAA
Trigger: GGCGGCCTGACGACCAAGCCAGCTGCAGTGGCGGCG...GGAAGCTCTCACATCCTCCAAATGCTGTCTCTGCCTGCCGGATAATGCTTGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS-3UTR CCA 90 bp GTGCTCCCTCAGCCCCAAGAGAGCGCAGTCTCTCATTCTCCAGCCCCAGCCTTGCTGAGGTCCCAGTCTTaGGTGAGTTCCCTGAGAGTG +
Preference number: 4 (lower is better)
Translates to: VLPQPQESAVSHSPAPALLRSQS*VSSLRV
Trigger: CACTCTCAGGGAACTCACCCAAGACTGGGACCTCAG...CAAGGCTGGGGCTGGAGAATGAGAGACTGCGCTCTCTTGGGGCTGAGGGAGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CCA 90 bp CTGCATGGTGCTCCCTCAGCCCCAAGAGAGCGCAGTCTCTCATTCTCCAGCCCCCTGAGGTCCCAGTCTTaGGTGAGTTCCCTGAGAGTG +
Preference number: 4 (lower is better)
Translates to: LHGAPSAPRERSLSFSSPLRSQS*VSSLRV
Trigger: CACTCTCAGGGAACTCACCCAAGACTGGGACCTCAG...GGGGCTGGAGAATGAGAGACTGCGCTCTCTTGGGGCTGAGGGAGCACCATGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CCA 90 bp GTGCTCCCTCAGCCCCAAGAGAGCGCAGTCTCTCATTCTCCAGCCCCAGCCTTGTGCTCCATCAAGGCTTaGCGTCGCTTTTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: VLPQPQESAVSHSPAPALCSIKA*RRFSSS
Trigger: GGAGCTGGAAAAGCGACGCCAAGCCTTGATGGAGCA...CAAGGCTGGGGCTGGAGAATGAGAGACTGCGCTCTCTTGGGGCTGAGGGAGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CCA 90 bp GAGCGCAGTCTCTCATTCTCCAGCCCCAGCCTTGTGGGCTGTCCCGCTGGTGCTGCTGCTCCATTAAGCTaGCAGCTGCAGAACCTGATG +
Preference number: 4 (lower is better)
Translates to: ERSLSFSSPSLVGCPAGAAAPLS*QLQNLM
Trigger: CATCAGGTTCTGCAGCTGCCAGCTTAATGGAGCAGC...AGCACCAGCGGGACAGCCCACAAGGCTGGGGCTGGAGAATGAGAGACTGCGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CCA 90 bp CCCAGCAGAGGTCACTGGCGTGGAATGGTTACAGCGTCACCAAACCACTCCACGAGGGGTGAAGCTGCATaGTGCTCCCTCAGCCCCAAG +
Preference number: 4 (lower is better)
Translates to: PSRGHWRGMVTASPNHSTRGEAA*CSLSPK
Trigger: CTTGGGGCTGAGGGAGCACCATGCAGCTTCACCCCT...CGTGGAGTGGTTTGGTGACGCTGTAACCATTCCACGCCAGTGACCTCTGCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CCA 90 bp CTTCCCCTCCTGAGTGGCTGTGACCCAGCAGAGGTCACTGGCGTGGAATGGTTAAGGGGTGAAGCTGCATaGTGCTCCCTCAGCCCCAAG +
Preference number: 4 (lower is better)
Translates to: LPLLSGCDPAEVTGVEWLRGEAA*CSLSPK
Trigger: CTTGGGGCTGAGGGAGCACCATGCAGCTTCACCCCT...TAACCATTCCACGCCAGTGACCTCTGCTGGGTCACAGCCACTCAGGAGGGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CCA 90 bp CCTCAGCCCCAAGAGAGCGCAGTCTCTCATTCTCCAGCCCCAGCCTTGTGGGCTCAAACCACTCCACGGTaGACACATTCAACCGAGCGG +
Preference number: 4 (lower is better)
Translates to: PQPQESAVSHSPAPALWAQTTPR*THSTER
Trigger: CCGCTCGGTTGAATGTGTCCACCGTGGAGTGGTTTG...AGCCCACAAGGCTGGGGCTGGAGAATGAGAGACTGCGCTCTCTTGGGGCTGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
3UTR CAA 72 bp CAAGAGAGCGCAGTCTCTCATTCTCCAGCCCCAGCCTaGTGGGCTGTCCCGCTGGTGCTGTCCTTTAGAACC +
Preference number: 4 (lower is better)
Translates to: QESAVSHSPAPA*WAVPLVLSFRT
Trigger: GGTTCTAAAGGACAGCACCAGCGGGACAGCCCACAAGGCTGGGGCTGGAGAATGAGAGACTGCGCTCTCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000427234.5
ENST00000622089.4
CDS-3UTR TCA 90 bp AGCGCAGTCTCTCATTCTCCAGCCCCAGCCTTGTGGGCTGTCCCGCTGGTGCTGATAGCTGTGGGAAACTaGGCCATCATGGTCCTGAGT +
Preference number: 4 (lower is better)
Translates to: SAVSHSPAPALWAVPLVLIAVGN*AIMVLS
Trigger: ACTCAGGACCATGATGGCTCAGTTTCCCACAGCTAT...CAGCACCAGCGGGACAGCCCACAAGGCTGGGGCTGGAGAATGAGAGACTGCGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR TCA 90 bp GTGAAGCTGCATGGTGCTCCCTCAGCCCCAAGAGAGCGCAGTCTCTCATTCTCCGCTGGAGGCAATGGCTaGGGAATGGACAGATTGGGC +
Preference number: 4 (lower is better)
Translates to: VKLHGAPSAPRERSLSFSAGGNG*GMDRLG
Trigger: GCCCAATCTGTCCATTCCTCAGCCATTGCCTCCAGC...GGAGAATGAGAGACTGCGCTCTCTTGGGGCTGAGGGAGCACCATGCAGCTTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR TCA 90 bp AGCGCAGTCTCTCATTCTCCAGCCCCAGCCTTGTGGGCTGTCCCGCTGGTGCTGTGGGTAAAGGCTGAATaGGACTGGCGGTTCCATTTG +
Preference number: 4 (lower is better)
Translates to: SAVSHSPAPALWAVPLVLWVKAE*DWRFHL
Trigger: CAAATGGAACCGCCAGTCTCATTCAGCCTTTACCCA...CAGCACCAGCGGGACAGCCCACAAGGCTGGGGCTGGAGAATGAGAGACTGCGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR TCA 90 bp CCAAGAGAGCGCAGTCTCTCATTCTCCAGCCCCAGCCTTGTGGGCTGTCCCGCTTTGAGTCGGACATCCTaGAGTCTGCCTGAGATCTGC +
Preference number: 4 (lower is better)
Translates to: PRERSLSFSSPSLVGCPALSRTS*SLPEIC
Trigger: GCAGATCTCAGGCAGACTTCAGGATGTCCGACTCAA...AGCGGGACAGCCCACAAGGCTGGGGCTGGAGAATGAGAGACTGCGCTCTCTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR TCA 90 bp CCCAAGAGAGCGCAGTCTCTCATTCTCCAGCCCCAGCCTTGTGGGCTGTCCCGCTTCAGTGAGAAAGCCTaGCTCTGCCATGCGTTTCTG +
Preference number: 4 (lower is better)
Translates to: PKRAQSLILQPQPCGLSRFSEKA*LCHAFL
Trigger: CAGAAACGCATGGCAGAGTCAGGCTTTCTCACTGAA...GCGGGACAGCCCACAAGGCTGGGGCTGGAGAATGAGAGACTGCGCTCTCTTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR TCA 90 bp TGCATGGTGCTCCCTCAGCCCCAAGAGAGCGCAGTCTCTCATTCTCCAGCCCCACCATCTCCCCTTCAGTaGGAAAGCCTGACTCTGCCA +
Preference number: 4 (lower is better)
Translates to: CMVLPQPQESAVSHSPAPPSPLQ*ESLTLP
Trigger: TGGCAGAGTCAGGCTTTCTCACTGAAGGGGAGATGG...TGGGGCTGGAGAATGAGAGACTGCGCTCTCTTGGGGCTGAGGGAGCACCATGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR TCA 90 bp CCAAGAGAGCGCAGTCTCTCATTCTCCAGCCCCAGCCTTGTGGGCTGTCCCGCTGAGCCATCATGGTCCTaGGTTTTCCTTGGCTCTCAG +
Preference number: 4 (lower is better)
Translates to: PRERSLSFSSPSLVGCPAEPSWS*VFLGSQ
Trigger: CTGAGAGCCAAGGAAAACTCAGGACCATGATGGCTC...AGCGGGACAGCCCACAAGGCTGGGGCTGGAGAATGAGAGACTGCGCTCTCTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622089.4
CDS-3UTR GCA 90 bp GTGCTCCCTCAGCCCCAAGAGAGCGCAGTCTCTCATTCTCCAGCCCCAGCCTTGCTGGGCTTTACGTTCTaGCTCCCTTTGTTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: VLPQPQESAVSHSPAPALLGFTF*LPLLLL
Trigger: GAGCAGCAACAAAGGGAGGCAGAACGTAAAGCCCAG...CAAGGCTGGGGCTGGAGAATGAGAGACTGCGCTCTCTTGGGGCTGAGGGAGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR GCA 90 bp AGAGGTCACTGGCGTGGAATGGTTACAGCGTCACCAAACCACTCCACGGTGGACGCCGCCTTGATCTTCTaGACCCAGGCGGTCCTCTCA +
Preference number: 4 (lower is better)
Translates to: RGHWRGMVTASPNHSTVDAALIF*TQAVLS
Trigger: TGAGAGGACCGCCTGGGTGCAGAAGATCAAGGCGGC...GTCCACCGTGGAGTGGTTTGGTGACGCTGTAACCATTCCACGCCAGTGACCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR GCA 90 bp GACCCAGCAGAGGTCACTGGCGTGGAATGGTTACAGCGTCACCAAACCACTCCAGCCGCCTTGATCTTCTaGACCCAGGCGGTCCTCTCA +
Preference number: 4 (lower is better)
Translates to: DPAEVTGVEWLQRHQTTPAALIF*TQAVLS
Trigger: TGAGAGGACCGCCTGGGTGCAGAAGATCAAGGCGGC...TGGAGTGGTTTGGTGACGCTGTAACCATTCCACGCCAGTGACCTCTGCTGGGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR GCA 90 bp GAGCGCAGTCTCTCATTCTCCAGCCCCAGCCTTGTGGGCTGTCCCGCTGGTGCTGTAGCTTCAATGACATaGACCATCAGGCGCCCAATG +
Preference number: 4 (lower is better)
Translates to: ERSLSFSSPSLVGCPAGAVASMT*TIRRPM
Trigger: CATTGGGCGCCTGATGGTGCATGTCATTGAAGCTAC...AGCACCAGCGGGACAGCCCACAAGGCTGGGGCTGGAGAATGAGAGACTGCGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000427234.5
ENST00000622089.4
CDS-3UTR GCA 90 bp GTGAAGCTGCATGGTGCTCCCTCAGCCCCAAGAGAGCGCAGTCTCTCATTCTCCGGGCTGTCCCGCTGGTaGTGTCCTTTAGAACCCCTA +
Preference number: 4 (lower is better)
Translates to: VKLHGAPSAPRERSLSFSGLSRW*CPLEPL
Trigger: TAGGGGTTCTAAAGGACAGCACCAGCGGGACAGCCC...GGAGAATGAGAGACTGCGCTCTCTTGGGGCTGAGGGAGCACCATGCAGCTTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000427234.5
ENST00000622089.4
CDS-3UTR GCA 90 bp GAAGCTGCATGGTGCTCCCTCAGCCCCAAGAGAGCGCAGTCTCTCATTCTCCAGGGTGAAGCTGCATGGTaGTCCCTCAGCCCCAAGAGA +
Preference number: 4 (lower is better)
Translates to: EAAWCSLSPKRAQSLILQGEAAW*SLSPKR
Trigger: TCTCTTGGGGCTGAGGGAGCACCATGCAGCTTCACC...CTGGAGAATGAGAGACTGCGCTCTCTTGGGGCTGAGGGAGCACCATGCAGCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000427234.5
ENST00000622089.4
CDS-3UTR CCA 90 bp GGGGCTCCTGCCACATCCAACGAAGCCATGCGAATGCCCTCTTGTTCTCCCGCTCTGAGGTCCCAGTCTTaGGTGAGTTCCCTGAGAGTG +
Preference number: 4 (lower is better)
Translates to: GAPATSNEAMRMPSCSPALRSQS*VSSLRV
Trigger: CACTCTCAGGGAACTCACCCAAGACTGGGACCTCAG...AGCGGGAGAACAAGAGGGCATTCGCATGGCTTCGTTGGATGTGGCAGGAGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS-3UTR CCA 90 bp GTGCTCCCTCAGCCCCAAGAGAGCGCAGTCTCTCATTCTCCAGCCCCAGCCTTGCGCTGGAAGGGTCTGTaGGCAGTTTCACCAAGACTT +
Preference number: 4 (lower is better)
Translates to: VLPQPQESAVSHSPAPALRWKGL*AVSPRL
Trigger: AAGTCTTGGTGAAACTGCCCACAGACCCTTCCAGCG...CAAGGCTGGGGCTGGAGAATGAGAGACTGCGCTCTCTTGGGGCTGAGGGAGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CCA 90 bp CCAAGAGAGCGCAGTCTCTCATTCTCCAGCCCCAGCCTTGTGGGCTGTCCCGCTCGCTGGAAGGGTCTGTaGGCAGTTTCACCAAGACTT +
Preference number: 4 (lower is better)
Translates to: PRERSLSFSSPSLVGCPARWKGL*AVSPRL
Trigger: AAGTCTTGGTGAAACTGCCCACAGACCCTTCCAGCG...AGCGGGACAGCCCACAAGGCTGGGGCTGGAGAATGAGAGACTGCGCTCTCTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CCA 90 bp CCCAGCAGAGGTCACTGGCGTGGAATGGTTACAGCGTCACCAAACCACTCCACGTGTCCTGGATGGTCCTaGTGGTGTAGCTCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: PSRGHWRGMVTASPNHSTCPGWS*WCSSGS
Trigger: GCTCCCAGAGCTACACCACCAGGACCATCCAGGACA...CGTGGAGTGGTTTGGTGACGCTGTAACCATTCCACGCCAGTGACCTCTGCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CCA 90 bp CAGCAGCAGTCGGCGGGTCATAGGGCCTTTGCTTTCCTGTTCTGTTCGAATTTTCCAGCCCCAGCCTTGTaGGCTGTCCCGCTGGTGCTG +
Preference number: 4 (lower is better)
Translates to: QQQSAGHRAFAFLFCSNFPAPAL*AVPLVL
Trigger: CAGCACCAGCGGGACAGCCCACAAGGCTGGGGCTGG...AAAATTCGAACAGAACAGGAAAGCAAAGGCCCTATGACCCGCCGACTGCTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427234.5
CDS-3UTR CCA 90 bp CCCAAGAGAGCGCAGTCTCTCATTCTCCAGCCCCAGCCTTGTGGGCTGTCCCGCCCGAGCGGTAACATCTaGTGGTCTGATGCCTCATTT +
Preference number: 4 (lower is better)
Translates to: PKRAQSLILQPQPCGLSRPSGNI*WSDASF
Trigger: AAATGAGGCATCAGACCACCAGATGTTACCGCTCGG...GCGGGACAGCCCACAAGGCTGGGGCTGGAGAATGAGAGACTGCGCTCTCTTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000427234.5
ENST00000622089.4
CDS-3UTR TCA 90 bp CCTCAGCCCCAAGAGAGCGCAGTCTCTCATTCTCCAGCCCCAGCCTTGTGGGCTTGGGTAAAGGCTGAATaGGACTGGCGGTTCCATTTG +
Preference number: 4 (lower is better)
Translates to: PQPQESAVSHSPAPALWAWVKAE*DWRFHL
Trigger: CAAATGGAACCGCCAGTCTCATTCAGCCTTTACCCA...AGCCCACAAGGCTGGGGCTGGAGAATGAGAGACTGCGCTCTCTTGGGGCTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR TCA 90 bp CCCAAGAGAGCGCAGTCTCTCATTCTCCAGCCCCAGCCTTGTGGGCTGTCCCGCTTTAATCTTGTAGGCTaGGGAACTGCCCACTCTGAG +
Preference number: 4 (lower is better)
Translates to: PKRAQSLILQPQPCGLSRFNLVG*GTAHSE
Trigger: CTCAGAGTGGGCAGTTCCTCAGCCTACAAGATTAAA...GCGGGACAGCCCACAAGGCTGGGGCTGGAGAATGAGAGACTGCGCTCTCTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR TCA 90 bp CTGCATGGTGCTCCCTCAGCCCCAAGAGAGCGCAGTCTCTCATTCTCCAGCCCCATCCTGAAGTCTGCCTaGGATCTGCTGATGTTTGCC +
Preference number: 4 (lower is better)
Translates to: LHGAPSAPRERSLSFSSPILKSA*DLLMFA
Trigger: GGCAAACATCAGCAGATCTCAGGCAGACTTCAGGAT...GGGGCTGGAGAATGAGAGACTGCGCTCTCTTGGGGCTGAGGGAGCACCATGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR TCA 90 bp GTCACCAAACCACTCCACGGTGGACACATTCAACCGAGCGGTAACATCTGGTGGACCTCGACGACGAGCTaGAGGTCAGCCATGTACCGC +
Preference number: 4 (lower is better)
Translates to: VTKPLHGGHIQPSGNIWWTSTTS*RSAMYR
Trigger: GCGGTACATGGCTGACCTTCAGCTCGTCGTCGAGGT...CCACCAGATGTTACCGCTCGGTTGAATGTGTCCACCGTGGAGTGGTTTGGTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR TCA 90 bp GTGCTCCCTCAGCCCCAAGAGAGCGCAGTCTCTCATTCTCCAGCCCCAGCCTTGTTCAGTGAGAAAGCCTaGCTCTGCCATGCGTTTCTG +
Preference number: 4 (lower is better)
Translates to: VLPQPQESAVSHSPAPALFSEKA*LCHAFL
Trigger: CAGAAACGCATGGCAGAGTCAGGCTTTCTCACTGAA...CAAGGCTGGGGCTGGAGAATGAGAGACTGCGCTCTCTTGGGGCTGAGGGAGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR TCA 90 bp CCCAGCAGAGGTCACTGGCGTGGAATGGTTACAGCGTCACCAAACCACTCCACGACTCCCTCATTCACTTaGGAGCACAGCTCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: PSRGHWRGMVTASPNHSTTPSFT*EHSSSA
Trigger: GGCAGAGGAGCTGTGCTCTCAAGTGAATGAGGGAGT...CGTGGAGTGGTTTGGTGACGCTGTAACCATTCCACGCCAGTGACCTCTGCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR TCA 90 bp CCCAAGAGAGCGCAGTCTCTCATTCTCCAGCCCCAGCCTTGTGGGCTGTCCCGCGAAGCAGGAAGTCATTaGAGAGGAATCCGTGCAGTT +
Preference number: 4 (lower is better)
Translates to: PKRAQSLILQPQPCGLSREAGSH*RGIRAV
Trigger: AACTGCACGGATTCCTCTTCAATGACTTCCTGCTTC...GCGGGACAGCCCACAAGGCTGGGGCTGGAGAATGAGAGACTGCGCTCTCTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000427234.5
ENST00000622089.4
CDS-3UTR TCA 90 bp TCCACGGTGGACACATTCAACCGAGCGGTAACATCTGGTGGTCTGATGCCTCATCAGGCGCCCAATGCCTaGAGTCTTTTGGGAGCGGGC +
Preference number: 4 (lower is better)
Translates to: STVDTFNRAVTSGGLMPHQAPNA*SLLGAG
Trigger: GCCCGCTCCCAAAAGACTTCAGGCATTGGGCGCCTG...ATGAGGCATCAGACCACCAGATGTTACCGCTCGGTTGAATGTGTCCACCGTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR TCA 90 bp TGCACGAGTAGACGCTATTTCAGTATCAGGCCGCGCCAAGTGTCGAGGCTGCAGTGGCTTTGTGAGGGGTaGAGCTGCATGGTGCTCCCT +
Preference number: 4 (lower is better)
Translates to: CTSRRYFSIRPRQVSRLQWLCEG*SCMVLP
Trigger: AGGGAGCACCATGCAGCTTCACCCCTCACAAAGCCA...CTGCAGCCTCGACACTTGGCGCGGCCTGATACTGAAATAGCGTCTACTCGTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR GCA 90 bp GCGCAGTCTCTCATTCTCCAGCCCCAGCCTTGTGGGCTGTCCCGCTGGTGCTGTTGGACAGATTGGGCATaGTTCCCATTCCAAAACGAG +
Preference number: 4 (lower is better)
Translates to: AQSLILQPQPCGLSRWCCWTDWA*FPFQNE
Trigger: CTCGTTTTGGAATGGGAAGCATGCCCAATCTGTCCA...ACAGCACCAGCGGGACAGCCCACAAGGCTGGGGCTGGAGAATGAGAGACTGCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR GCA 90 bp GCGCAGTCTCTCATTCTCCAGCCCCAGCCTTGTGGGCTGTCCCGCTGGTGCTGTGCCTGTAACTCTCCTTaGCACCACCCACTTGTATTT +
Preference number: 4 (lower is better)
Translates to: AQSLILQPQPCGLSRWCCACNSP*HHPLVF
Trigger: AAATACAAGTGGGTGGTGGCAAGGAGAGTTACAGGC...ACAGCACCAGCGGGACAGCCCACAAGGCTGGGGCTGGAGAATGAGAGACTGCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR GCA 90 bp AGCGCAGTCTCTCATTCTCCAGCCCCAGCCTTGTGGGCTGTCCCGCTGGTGCTGCCGTTGATCTCTCCTTaGCACCAATCAGGATCATCT +
Preference number: 4 (lower is better)
Translates to: SAVSHSPAPALWAVPLVLPLISP*HQSGSS
Trigger: AGATGATCCTGATTGGTGGCAAGGAGAGATCAACGG...CAGCACCAGCGGGACAGCCCACAAGGCTGGGGCTGGAGAATGAGAGACTGCGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR GCA 90 bp GCAGAGGTCACTGGCGTGGAATGGTTACAGCGTCACCAAACCACTCCACGGTGGCCATCAGGCGCCCAATaGCTGAAGTCTTTTGGGAGC +
Preference number: 4 (lower is better)
Translates to: AEVTGVEWLQRHQTTPRWPSGAQ*LKSFGS
Trigger: GCTCCCAAAAGACTTCAGGCATTGGGCGCCTGATGG...CCACCGTGGAGTGGTTTGGTGACGCTGTAACCATTCCACGCCAGTGACCTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR GCA 90 bp CCTCAGCCCCAAGAGAGCGCAGTCTCTCATTCTCCAGCCCCAGCCTTGTGGGCTGTAGCTTCAATGACATaGACCATCAGGCGCCCAATG +
Preference number: 4 (lower is better)
Translates to: PQPQESAVSHSPAPALWAVASMT*TIRRPM
Trigger: CATTGGGCGCCTGATGGTGCATGTCATTGAAGCTAC...AGCCCACAAGGCTGGGGCTGGAGAATGAGAGACTGCGCTCTCTTGGGGCTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000427234.5
ENST00000622089.4
CDS-3UTR GCA 90 bp CTGCATGGTGCTCCCTCAGCCCCAAGAGAGCGCAGTCTCTCATTCTCCAGCCCCGTAGCTTCAATGACATaGACCATCAGGCGCCCAATG +
Preference number: 4 (lower is better)
Translates to: LHGAPSAPRERSLSFSSPVASMT*TIRRPM
Trigger: CATTGGGCGCCTGATGGTGCATGTCATTGAAGCTAC...GGGGCTGGAGAATGAGAGACTGCGCTCTCTTGGGGCTGAGGGAGCACCATGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000427234.5
ENST00000622089.4
CDS-3UTR GCA 90 bp CCCCAGCCTTGTGGGCTGTCCCGCTGGTGCTGTCCTTTAGAACCCCTACAGGAGGTAGCTTCAATGACATaGACCATCAGGCGCCCAATG +
Preference number: 4 (lower is better)
Translates to: PQPCGLSRWCCPLEPLQEVASMT*TIRRPM
Trigger: CATTGGGCGCCTGATGGTGCATGTCATTGAAGCTAC...CTCCTGTAGGGGTTCTAAAGGACAGCACCAGCGGGACAGCCCACAAGGCTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427234.5
CDS-3UTR GCA 90 bp GACCCAGCAGAGGTCACTGGCGTGGAATGGTTACAGCGTCACCAAACCACTCCAGGGCTGTCCCGCTGGTaGTGTCCTTTAGAACCCCTA +
Preference number: 4 (lower is better)
Translates to: DPAEVTGVEWLQRHQTTPGLSRW*CPLEPL
Trigger: TAGGGGTTCTAAAGGACAGCACCAGCGGGACAGCCC...TGGAGTGGTTTGGTGACGCTGTAACCATTCCACGCCAGTGACCTCTGCTGGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR GCA 90 bp GAGCGCAGTCTCTCATTCTCCAGCCCCAGCCTTGTGGGCTGTCCCGCTGGTGCTGCTAGCTATTTAGTGTaGAGGAAAACAGAGCCCCCA +
Preference number: 4 (lower is better)
Translates to: ERSLSFSSPSLVGCPAGAASYLV*RKTEPP
Trigger: TGGGGGCTCTGTTTTCCTGCACACTAAATAGCTAGC...AGCACCAGCGGGACAGCCCACAAGGCTGGGGCTGGAGAATGAGAGACTGCGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000427234.5
ENST00000622089.4
CDS-3UTR CCA 90 bp GCGCAGTCTCTCATTCTCCAGCCCCAGCCTTGTGGGCTGTCCCGCTGGTGCTGTTGTTATAGGTGCAGCTaGAGGCAATGGCTGAGGAAT +
Preference number: 4 (lower is better)
Translates to: AQSLILQPQPCGLSRWCCCYRCS*RQWLRN
Trigger: ATTCCTCAGCCATTGCCTCCAGCTGCACCTATAACA...ACAGCACCAGCGGGACAGCCCACAAGGCTGGGGCTGGAGAATGAGAGACTGCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CCA 90 bp GAGCGCAGTCTCTCATTCTCCAGCCCCAGCCTTGTGGGCTGTCCCGCTGGTGCTTGTTATAGGTGCAGCTaGAGGCAATGGCTGAGGAAT +
Preference number: 4 (lower is better)
Translates to: ERSLSFSSPSLVGCPAGACYRCS*RQWLRN
Trigger: ATTCCTCAGCCATTGCCTCCAGCTGCACCTATAACA...AGCACCAGCGGGACAGCCCACAAGGCTGGGGCTGGAGAATGAGAGACTGCGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CCA 90 bp CCTCAGCCCCAAGAGAGCGCAGTCTCTCATTCTCCAGCCCCAGCCTTGTGGGCTTTAAGGGAGGAAGGTTaGTCCCTGAAGTCGCAGAAG +
Preference number: 4 (lower is better)
Translates to: PQPQESAVSHSPAPALWALREEG*SLKSQK
Trigger: CTTCTGCGACTTCAGGGACCAACCTTCCTCCCTTAA...AGCCCACAAGGCTGGGGCTGGAGAATGAGAGACTGCGCTCTCTTGGGGCTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CCA 90 bp CTTCCCCTCCTGAGTGGCTGTGACCCAGCAGAGGTCACTGGCGTGGAATGGTTAAGCTTTAGGGAGGAATaGTCTGCATGGCTCTCCGGG +
Preference number: 4 (lower is better)
Translates to: LPLLSGCDPAEVTGVEWLSFREE*SAWLSG
Trigger: CCCGGAGAGCCATGCAGACCATTCCTCCCTAAAGCT...TAACCATTCCACGCCAGTGACCTCTGCTGGGTCACAGCCACTCAGGAGGGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CCA 90 bp GTGCTCCCTCAGCCCCAAGAGAGCGCAGTCTCTCATTCTCCAGCCCCAGCCTTGCCGAGCGGTAACATCTaGTGGTCTGATGCCTCATTT +
Preference number: 4 (lower is better)
Translates to: VLPQPQESAVSHSPAPALPSGNI*WSDASF
Trigger: AAATGAGGCATCAGACCACCAGATGTTACCGCTCGG...CAAGGCTGGGGCTGGAGAATGAGAGACTGCGCTCTCTTGGGGCTGAGGGAGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000427234.5
ENST00000622089.4
CDS-3UTR CCA 90 bp GACCCAGCAGAGGTCACTGGCGTGGAATGGTTACAGCGTCACCAAACCACTCCACCCAGCAGAGGTCACTaGCGTGGAATGGTTACAGCG +
Preference number: 4 (lower is better)
Translates to: DPAEVTGVEWLQRHQTTPPSRGH*RGMVTA
Trigger: CGCTGTAACCATTCCACGCCAGTGACCTCTGCTGGG...TGGAGTGGTTTGGTGACGCTGTAACCATTCCACGCCAGTGACCTCTGCTGGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR TCA 90 bp CCTCAGCCCCAAGAGAGCGCAGTCTCTCATTCTCCAGCCCCAGCCTTGTGGGCTGGCAACTGTTGGCCTTaGAGCTTCAGTTTGATGAGT +
Preference number: 4 (lower is better)
Translates to: PQPQESAVSHSPAPALWAGNCWP*SFSLMS
Trigger: ACTCATCAAACTGAAGCTTCAAGGCCAACAGTTGCC...AGCCCACAAGGCTGGGGCTGGAGAATGAGAGACTGCGCTCTCTTGGGGCTGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR TCA 90 bp GTGCTCCCTCAGCCCCAAGAGAGCGCAGTCTCTCATTCTCCAGCCCCAGCCTTGGGCAACTGTTGGCCTTaGAGCTTCAGTTTGATGAGT +
Preference number: 4 (lower is better)
Translates to: VLPQPQESAVSHSPAPALGNCWP*SFSLMS
Trigger: ACTCATCAAACTGAAGCTTCAAGGCCAACAGTTGCC...CAAGGCTGGGGCTGGAGAATGAGAGACTGCGCTCTCTTGGGGCTGAGGGAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR TCA 90 bp CCCAGCAGAGGTCACTGGCGTGGAATGGTTACAGCGTCACCAAACCACTCCACGGGAATGGGTAAAGGCTaGATGAGACTGGCGGTTCCA +
Preference number: 4 (lower is better)
Translates to: PSRGHWRGMVTASPNHSTGMGKG*MRLAVP
Trigger: TGGAACCGCCAGTCTCATTCAGCCTTTACCCATTCC...CGTGGAGTGGTTTGGTGACGCTGTAACCATTCCACGCCAGTGACCTCTGCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR TCA 90 bp GCGCAGTCTCTCATTCTCCAGCCCCAGCCTTGTGGGCTGTCCCGCTGGTGCTGTCCCATGAGGCAATGTTaGAGAAGAATAAGGAATGGG +
Preference number: 4 (lower is better)
Translates to: AQSLILQPQPCGLSRWCCPMRQC*RRIRNG
Trigger: CCCATTCCTTATTCTTCTTCAACATTGCCTCATGGG...ACAGCACCAGCGGGACAGCCCACAAGGCTGGGGCTGGAGAATGAGAGACTGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR TCA 90 bp GCGCAGTCTCTCATTCTCCAGCCCCAGCCTTGTGGGCTGTCCCGCTGGTGCTGTTTTGCTTTCCTCCTCTaGAAGATGGAGGAACAAGCT +
Preference number: 4 (lower is better)
Translates to: AQSLILQPQPCGLSRWCCFAFLL*KMEEQA
Trigger: AGCTTGTTCCTCCATCTTTCAGAGGAGGAAAGCAAA...ACAGCACCAGCGGGACAGCCCACAAGGCTGGGGCTGGAGAATGAGAGACTGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR TCA 90 bp GTGCTCCCTCAGCCCCAAGAGAGCGCAGTCTCTCATTCTCCAGCCCCAGCCTTGAGAGGAAGAGGTTGTTaGGACAGCTTAGCAGAGACA +
Preference number: 4 (lower is better)
Translates to: VLPQPQESAVSHSPAPALRGRGC*DSLAET
Trigger: TGTCTCTGCTAAGCTGTCTCAACAACCTCTTCCTCT...CAAGGCTGGGGCTGGAGAATGAGAGACTGCGCTCTCTTGGGGCTGAGGGAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355123.9
CDS-3UTR TCA 90 bp GAGCGCAGTCTCTCATTCTCCAGCCCCAGCCTTGTGGGCTGTCCCGCTGGTGCTACTTGTCCCTGTCCATaGATAGGTGATACAGATCCA +
Preference number: 4 (lower is better)
Translates to: ERSLSFSSPSLVGCPAGATCPCP*IGDTDP
Trigger: TGGATCTGTATCACCTATTCATGGACAGGGACAAGT...AGCACCAGCGGGACAGCCCACAAGGCTGGGGCTGGAGAATGAGAGACTGCGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR TCA 90 bp AGCGCAGTCTCTCATTCTCCAGCCCCAGCCTTGTGGGCTGTCCCGCTGGTGCTGCCCAAAAGTTTAACATaGCTGGCAGGAAACCATCCT +
Preference number: 4 (lower is better)
Translates to: SAVSHSPAPALWAVPLVLPKSLT*LAGNHP
Trigger: AGGATGGTTTCCTGCCAGTCATGTTAAACTTTTGGG...CAGCACCAGCGGGACAGCCCACAAGGCTGGGGCTGGAGAATGAGAGACTGCGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR TCA 90 bp TCCACGGTGGACACATTCAACCGAGCGGTAACATCTGGTGGTCTGATGCCTCATACCTCGACGACGAGCTaGAGGTCAGCCATGTACCGC +
Preference number: 4 (lower is better)
Translates to: STVDTFNRAVTSGGLMPHTSTTS*RSAMYR
Trigger: GCGGTACATGGCTGACCTTCAGCTCGTCGTCGAGGT...ATGAGGCATCAGACCACCAGATGTTACCGCTCGGTTGAATGTGTCCACCGTGGA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR TCA 90 bp AGAGGTCACTGGCGTGGAATGGTTACAGCGTCACCAAACCACTCCACGGTGGACCCATCTCCCCTTCAGTaGGAAAGCCTGACTCTGCCA +
Preference number: 4 (lower is better)
Translates to: RGHWRGMVTASPNHSTVDPSPLQ*ESLTLP
Trigger: TGGCAGAGTCAGGCTTTCTCACTGAAGGGGAGATGG...GTCCACCGTGGAGTGGTTTGGTGACGCTGTAACCATTCCACGCCAGTGACCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR TCA 90 bp GTGCTCCCTCAGCCCCAAGAGAGCGCAGTCTCTCATTCTCCAGCCCCAGCCTTGGAAGCAGGAAGTCATTaGAGAGGAATCCGTGCAGTT +
Preference number: 4 (lower is better)
Translates to: VLPQPQESAVSHSPAPALEAGSH*RGIRAV
Trigger: AACTGCACGGATTCCTCTTCAATGACTTCCTGCTTC...CAAGGCTGGGGCTGGAGAATGAGAGACTGCGCTCTCTTGGGGCTGAGGGAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000427234.5
ENST00000622089.4
CDS-3UTR TCA 90 bp CTGCATGGTGCTCCCTCAGCCCCAAGAGAGCGCAGTCTCTCATTCTCCAGCCCCCATTGGACTTCGAGCTaGAAAGTTTCTCAGAGCCAG +
Preference number: 4 (lower is better)
Translates to: LHGAPSAPRERSLSFSSPHWTSS*KVSQSQ
Trigger: CTGGCTCTGAGAAACTTTTCAGCTCGAAGTCCAATG...GGGGCTGGAGAATGAGAGACTGCGCTCTCTTGGGGCTGAGGGAGCACCATGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000427234.5
ENST00000622089.4
CDS-3UTR TCA 90 bp CCAGCCCCAGCCTTGTGGGCTGTCCCGCTGGTGCTGTCCTTTAGAACCCCTACACATTGGACTTCGAGCTaGAAAGTTTCTCAGAGCCAG +
Preference number: 4 (lower is better)
Translates to: PAPALWAVPLVLSFRTPTHWTSS*KVSQSQ
Trigger: CTGGCTCTGAGAAACTTTTCAGCTCGAAGTCCAATG...TGTAGGGGTTCTAAAGGACAGCACCAGCGGGACAGCCCACAAGGCTGGGGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427234.5
CDS-3UTR TCA 90 bp CTTCCCCTCCTGAGTGGCTGTGACCCAGCAGAGGTCACTGGCGTGGAATGGTTACTCTGTCAAACAGGGTaGGACACAGCACGTCTTGGT +
Preference number: 4 (lower is better)
Translates to: LPLLSGCDPAEVTGVEWLLCQTG*DTARLG
Trigger: ACCAAGACGTGCTGTGTCTCACCCTGTTTGACAGAG...TAACCATTCCACGCCAGTGACCTCTGCTGGGTCACAGCCACTCAGGAGGGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR GCA 90 bp CGTCCTTCCTTGATGGGGCTCCTGCCACATCCAACGAAGCCATGCGAATGCCCTTCTGCCTCCCTTTGTTaGTGCTCCATCAAGGCTTGG +
Preference number: 4 (lower is better)
Translates to: RPSLMGLLPHPTKPCECPSASLC*CSIKAW
Trigger: CCAAGCCTTGATGGAGCAGCAACAAAGGGAGGCAGA...AGGGCATTCGCATGGCTTCGTTGGATGTGGCAGGAGCCCCATCAAGGAAGGACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS-3UTR GCA 90 bp CCCAGCAGAGGTCACTGGCGTGGAATGGTTACAGCGTCACCAAACCACTCCACGTCTGCCTCCCTTTGTTaGTGCTCCATCAAGGCTTGG +
Preference number: 4 (lower is better)
Translates to: PSRGHWRGMVTASPNHSTSASLC*CSIKAW
Trigger: CCAAGCCTTGATGGAGCAGCAACAAAGGGAGGCAGA...CGTGGAGTGGTTTGGTGACGCTGTAACCATTCCACGCCAGTGACCTCTGCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR GCA 90 bp CCAAGAGAGCGCAGTCTCTCATTCTCCAGCCCCAGCCTTGTGGGCTGTCCCGCTTTCCTCTCAATTGGCTaGATTGTGTCCAGGGTTTGC +
Preference number: 4 (lower is better)
Translates to: PRERSLSFSSPSLVGCPAFLSIG*IVSRVC
Trigger: GCAAACCCTGGACACAATGCAGCCAATTGAGAGGAA...AGCGGGACAGCCCACAAGGCTGGGGCTGGAGAATGAGAGACTGCGCTCTCTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR GCA 90 bp CCAAGAGAGCGCAGTCTCTCATTCTCCAGCCCCAGCCTTGTGGGCTGTCCCGCTAGCCTGACTCTGCCATaGGTTTCTGAAAAACCTCGA +
Preference number: 4 (lower is better)
Translates to: PRERSLSFSSPSLVGCPASLTLP*VSEKPR
Trigger: TCGAGGTTTTTCAGAAACGCATGGCAGAGTCAGGCT...AGCGGGACAGCCCACAAGGCTGGGGCTGGAGAATGAGAGACTGCGCTCTCTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR GCA 90 bp ACAGCGTCACCAAACCACTCCACGGTGGACACATTCAACCGAGCGGTAACATCTGCCGCCTTGATCTTCTaGACCCAGGCGGTCCTCTCA +
Preference number: 4 (lower is better)
Translates to: TASPNHSTVDTFNRAVTSAALIF*TQAVLS
Trigger: TGAGAGGACCGCCTGGGTGCAGAAGATCAAGGCGGC...AGATGTTACCGCTCGGTTGAATGTGTCCACCGTGGAGTGGTTTGGTGACGCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR GCA 90 bp ACCTCATGCAGCAGCAGTCGGCGGGTCATAGGGCCTTTGCTTTCCTGTTCTGTTGGTGAAGCTGCATGGTaGTCCCTCAGCCCCAAGAGA +
Preference number: 4 (lower is better)
Translates to: TSCSSSRRVIGPLLSCSVGEAAW*SLSPKR
Trigger: TCTCTTGGGGCTGAGGGAGCACCATGCAGCTTCACC...AACAGAACAGGAAAGCAAAGGCCCTATGACCCGCCGACTGCTGCTGCATGAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427234.5
CDS-3UTR GCA 90 bp CTCCTGCCACATCCAACGAAGCCATGCGAATGCCCTCTTGTTCTCCCGCTTCACAAGGAAGCTACGGTCTaGCATAGGCCCTTCCCATCC +
Preference number: 4 (lower is better)
Translates to: LLPHPTKPCECPLVLPLHKEATV*HRPFPS
Trigger: GGATGGGAAGGGCCTATGGCAGACCGTAGCTTCCTT...GTGAAGCGGGAGAACAAGAGGGCATTCGCATGGCTTCGTTGGATGTGGCAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS-3UTR CCA 90 bp TGCATGGTGCTCCCTCAGCCCCAAGAGAGCGCAGTCTCTCATTCTCCAGCCCCATGCAGCTGGAGGCAATaGCTGAGGAATGGACAGATT +
Preference number: 4 (lower is better)
Translates to: CMVLPQPQESAVSHSPAPCSWRQ*LRNGQI
Trigger: AATCTGTCCATTCCTCAGCCATTGCCTCCAGCTGCA...TGGGGCTGGAGAATGAGAGACTGCGCTCTCTTGGGGCTGAGGGAGCACCATGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CCA 90 bp CCTCAGCCCCAAGAGAGCGCAGTCTCTCATTCTCCAGCCCCAGCCTTGTGGGCTTCCCTCGCTCATAGTTaGCTTTCCGTTTGTCCTCAA +
Preference number: 4 (lower is better)
Translates to: PQPQESAVSHSPAPALWASLAHS*LSVCPQ
Trigger: TTGAGGACAAACGGAAAGCCAACTATGAGCGAGGGA...AGCCCACAAGGCTGGGGCTGGAGAATGAGAGACTGCGCTCTCTTGGGGCTGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CCA 90 bp GTGCTCCCTCAGCCCCAAGAGAGCGCAGTCTCTCATTCTCCAGCCCCAGCCTTGGATGAAAGGCAGGTGTaGCTCTTTCACTACTTGGAC +
Preference number: 4 (lower is better)
Translates to: VLPQPQESAVSHSPAPALDERQV*LFHYLD
Trigger: GTCCAAGTAGTGAAAGAGCCACACCTGCCTTTCATC...CAAGGCTGGGGCTGGAGAATGAGAGACTGCGCTCTCTTGGGGCTGAGGGAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CCA 90 bp CCCAGCAGAGGTCACTGGCGTGGAATGGTTACAGCGTCACCAAACCACTCCACGGCTGCTCCATTAAGCTaGCAGCTGCAGAACCTGATG +
Preference number: 4 (lower is better)
Translates to: PSRGHWRGMVTASPNHSTAAPLS*QLQNLM
Trigger: CATCAGGTTCTGCAGCTGCCAGCTTAATGGAGCAGC...CGTGGAGTGGTTTGGTGACGCTGTAACCATTCCACGCCAGTGACCTCTGCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CCA 90 bp TGCACGAGTAGACGCTATTTCAGTATCAGGCCGCGCCAAGTGTCGAGGCTGCAGAGCTTTAGGGAGGAATaGTCTGCATGGCTCTCCGGG +
Preference number: 4 (lower is better)
Translates to: CTSRRYFSIRPRQVSRLQSFREE*SAWLSG
Trigger: CCCGGAGAGCCATGCAGACCATTCCTCCCTAAAGCT...CTGCAGCCTCGACACTTGGCGCGGCCTGATACTGAAATAGCGTCTACTCGTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CCA 90 bp GACCCAGCAGAGGTCACTGGCGTGGAATGGTTACAGCGTCACCAAACCACTCCACAAACCACTCCACGGTaGACACATTCAACCGAGCGG +
Preference number: 4 (lower is better)
Translates to: DPAEVTGVEWLQRHQTTPQTTPR*THSTER
Trigger: CCGCTCGGTTGAATGTGTCCACCGTGGAGTGGTTTG...TGGAGTGGTTTGGTGACGCTGTAACCATTCCACGCCAGTGACCTCTGCTGGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CCA 90 bp TGCACGAGTAGACGCTATTTCAGTATCAGGCCGCGCCAAGTGTCGAGGCTGCAGCAGAGGTCACTGGCGTaGAATGGTTACAGCGTCACC +
Preference number: 4 (lower is better)
Translates to: CTSRRYFSIRPRQVSRLQQRSLA*NGYSVT
Trigger: GGTGACGCTGTAACCATTCCACGCCAGTGACCTCTG...CTGCAGCCTCGACACTTGGCGCGGCCTGATACTGAAATAGCGTCTACTCGTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CCA 90 bp GACCCAGCAGAGGTCACTGGCGTGGAATGGTTACAGCGTCACCAAACCACTCCACAGAGGTCACTGGCGTaGAATGGTTACAGCGTCACC +
Preference number: 4 (lower is better)
Translates to: DPAEVTGVEWLQRHQTTPQRSLA*NGYSVT
Trigger: GGTGACGCTGTAACCATTCCACGCCAGTGACCTCTG...TGGAGTGGTTTGGTGACGCTGTAACCATTCCACGCCAGTGACCTCTGCTGGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR TCA 90 bp CCCAGCAGAGGTCACTGGCGTGGAATGGTTACAGCGTCACCAAACCACTCCACGGAGCCATCATGGTCCTaGGTTTTCCTTGCTAGCTCT +
Preference number: 4 (lower is better)
Translates to: PSRGHWRGMVTASPNHSTEPSWS*VFLASS
Trigger: AGAGCTAGCAAGGAAAACTCAGGACCATGATGGCTC...CGTGGAGTGGTTTGGTGACGCTGTAACCATTCCACGCCAGTGACCTCTGCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355123.9
ENST00000361999.7
CDS-3UTR TCA 90 bp CTCCTGCCACATCCAACGAAGCCATGCGAATGCCCTCTTGTTCTCCCGCTTCACGGAATGGGTAAAGGCTaGATGAGACTGGCGGTTCCA +
Preference number: 4 (lower is better)
Translates to: LLPHPTKPCECPLVLPLHGMGKG*MRLAVP
Trigger: TGGAACCGCCAGTCTCATTCAGCCTTTACCCATTCC...GTGAAGCGGGAGAACAAGAGGGCATTCGCATGGCTTCGTTGGATGTGGCAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS-3UTR TCA 90 bp CCAAGAGAGCGCAGTCTCTCATTCTCCAGCCCCAGCCTTGTGGGCTGTCCCGCTCCCATGAGGCAATGTTaGAGAAGAATAAGGAATGGG +
Preference number: 4 (lower is better)
Translates to: PRERSLSFSSPSLVGCPAPMRQC*RRIRNG
Trigger: CCCATTCCTTATTCTTCTTCAACATTGCCTCATGGG...AGCGGGACAGCCCACAAGGCTGGGGCTGGAGAATGAGAGACTGCGCTCTCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR TCA 90 bp GCGCAGTCTCTCATTCTCCAGCCCCAGCCTTGTGGGCTGTCCCGCTGGTGCTGTAGGGCATTTCTAGCTTaGAAACCTGAGAGATATCCA +
Preference number: 4 (lower is better)
Translates to: AQSLILQPQPCGLSRWCCRAFLA*KPERYP
Trigger: TGGATATCTCTCAGGTTTTCAAGCTAGAAATGCCCT...ACAGCACCAGCGGGACAGCCCACAAGGCTGGGGCTGGAGAATGAGAGACTGCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR TCA 90 bp GTGCTCCCTCAGCCCCAAGAGAGCGCAGTCTCTCATTCTCCAGCCCCAGCCTTGTTTGCTTTCCTCCTCTaGAAGATGGAGGAACAAGCT +
Preference number: 4 (lower is better)
Translates to: VLPQPQESAVSHSPAPALFAFLL*KMEEQA
Trigger: AGCTTGTTCCTCCATCTTTCAGAGGAGGAAAGCAAA...CAAGGCTGGGGCTGGAGAATGAGAGACTGCGCTCTCTTGGGGCTGAGGGAGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR TCA 90 bp GCGCAGTCTCTCATTCTCCAGCCCCAGCCTTGTGGGCTGTCCCGCTGGTGCTGTACTGGTAATTTCTTCTaGGGCTCCTCTTCTTGCATT +
Preference number: 4 (lower is better)
Translates to: AQSLILQPQPCGLSRWCCTGNFF*GSSSCI
Trigger: AATGCAAGAAGAGGAGCCTCAGAAGAAATTACCAGT...ACAGCACCAGCGGGACAGCCCACAAGGCTGGGGCTGGAGAATGAGAGACTGCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR TCA 90 bp CCTCAGCCCCAAGAGAGCGCAGTCTCTCATTCTCCAGCCCCAGCCTTGTGGGCTCTCTATTCTTTTGATTaGGAAGCTCCTGTCGCCGAA +
Preference number: 4 (lower is better)
Translates to: PQPQESAVSHSPAPALWALYSFD*EAPVAE
Trigger: TTCGGCGACAGGAGCTTCTCAATCAAAAGAATAGAG...AGCCCACAAGGCTGGGGCTGGAGAATGAGAGACTGCGCTCTCTTGGGGCTGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR TCA 90 bp GAAGCTGCATGGTGCTCCCTCAGCCCCAAGAGAGCGCAGTCTCTCATTCTCCAGATCCTGAAGTCTGCCTaGGATCTGCTGATGTTTGCC +
Preference number: 4 (lower is better)
Translates to: EAAWCSLSPKRAQSLILQILKSA*DLLMFA
Trigger: GGCAAACATCAGCAGATCTCAGGCAGACTTCAGGAT...CTGGAGAATGAGAGACTGCGCTCTCTTGGGGCTGAGGGAGCACCATGCAGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR TCA 90 bp CTTCCCCTCCTGAGTGGCTGTGACCCAGCAGAGGTCACTGGCGTGGAATGGTTACTGTCCATGAATAGGTaGTACAGATCCAGGGGACAC +
Preference number: 4 (lower is better)
Translates to: LPLLSGCDPAEVTGVEWLLSMNR*YRSRGH
Trigger: GTGTCCCCTGGATCTGTATCACCTATTCATGGACAG...TAACCATTCCACGCCAGTGACCTCTGCTGGGTCACAGCCACTCAGGAGGGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR TCA 90 bp CCTCAGCCCCAAGAGAGCGCAGTCTCTCATTCTCCAGCCCCAGCCTTGTGGGCTACTTGTCCCTGTCCATaGATAGGTGATACAGATCCA +
Preference number: 4 (lower is better)
Translates to: PQPQESAVSHSPAPALWATCPCP*IGDTDP
Trigger: TGGATCTGTATCACCTATTCATGGACAGGGACAAGT...AGCCCACAAGGCTGGGGCTGGAGAATGAGAGACTGCGCTCTCTTGGGGCTGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR TCA 90 bp GTGCTCCCTCAGCCCCAAGAGAGCGCAGTCTCTCATTCTCCAGCCCCAGCCTTGCCCAAAAGTTTAACATaGCTGGCAGGAAACCATCCT +
Preference number: 4 (lower is better)
Translates to: VLPQPQESAVSHSPAPALPKSLT*LAGNHP
Trigger: AGGATGGTTTCCTGCCAGTCATGTTAAACTTTTGGG...CAAGGCTGGGGCTGGAGAATGAGAGACTGCGCTCTCTTGGGGCTGAGGGAGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR TCA 90 bp GTCACCAAACCACTCCACGGTGGACACATTCAACCGAGCGGTAACATCTGGTGGGACCAGTCACCCCGTTaGTCTCTCCTTGCCACCAAT +
Preference number: 4 (lower is better)
Translates to: VTKPLHGGHIQPSGNIWWDQSPR*SLLATN
Trigger: ATTGGTGGCAAGGAGAGATCAACGGGGTGACTGGTC...CCACCAGATGTTACCGCTCGGTTGAATGTGTCCACCGTGGAGTGGTTTGGTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR TCA 90 bp AGCGCAGTCTCTCATTCTCCAGCCCCAGCCTTGTGGGCTGTCCCGCTGGTGCTGCATCTTAACGTAGTTTaGAGGAAAGAGACCAGTCAC +
Preference number: 4 (lower is better)
Translates to: SAVSHSPAPALWAVPLVLHLNVV*RKETSH
Trigger: GTGACTGGTCTCTTTCCTTCAAACTACGTTAAGATG...CAGCACCAGCGGGACAGCCCACAAGGCTGGGGCTGGAGAATGAGAGACTGCGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR TCA 90 bp AGAGGTCACTGGCGTGGAATGGTTACAGCGTCACCAAACCACTCCACGGTGGACTCTGCCATGCGTTTCTaGAAAACCTCGACGACGAGC +
Preference number: 4 (lower is better)
Translates to: RGHWRGMVTASPNHSTVDSAMRF*KTSTTS
Trigger: GCTCGTCGTCGAGGTTTTTCAGAAACGCATGGCAGA...GTCCACCGTGGAGTGGTTTGGTGACGCTGTAACCATTCCACGCCAGTGACCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR TCA 90 bp TCCACGGTGGACACATTCAACCGAGCGGTAACATCTGGTGGTCTGATGCCTCATGCAGTGGGTAGCGGGTaGTCCTCTGCATGGGTTTCA +
Preference number: 4 (lower is better)
Translates to: STVDTFNRAVTSGGLMPHAVGSG*SSAWVS
Trigger: TGAAACCCATGCAGAGGATCACCCGCTACCCACTGC...ATGAGGCATCAGACCACCAGATGTTACCGCTCGGTTGAATGTGTCCACCGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR TCA 90 bp TGCACGAGTAGACGCTATTTCAGTATCAGGCCGCGCCAAGTGTCGAGGCTGCAGTCTGGGAGCCCATGCTaGTTTCACAGTATGGGTTGC +
Preference number: 4 (lower is better)
Translates to: CTSRRYFSIRPRQVSRLQSGSPC*FHSMGC
Trigger: GCAACCCATACTGTGAAATCAGCATGGGCTCCCAGA...CTGCAGCCTCGACACTTGGCGCGGCCTGATACTGAAATAGCGTCTACTCGTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR TCA 90 bp GACCCAGCAGAGGTCACTGGCGTGGAATGGTTACAGCGTCACCAAACCACTCCACTCTGTCAAACAGGGTaGGACACAGCACGTCTTGGT +
Preference number: 4 (lower is better)
Translates to: DPAEVTGVEWLQRHQTTPLCQTG*DTARLG
Trigger: ACCAAGACGTGCTGTGTCTCACCCTGTTTGACAGAG...TGGAGTGGTTTGGTGACGCTGTAACCATTCCACGCCAGTGACCTCTGCTGGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR TCA 90 bp ACAGCGTCACCAAACCACTCCACGGTGGACACATTCAACCGAGCGGTAACATCTTGGCTTTGTGAGGGGTaGAGCTGCATGGTGCTCCCT +
Preference number: 4 (lower is better)
Translates to: TASPNHSTVDTFNRAVTSWLCEG*SCMVLP
Trigger: AGGGAGCACCATGCAGCTTCACCCCTCACAAAGCCA...AGATGTTACCGCTCGGTTGAATGTGTCCACCGTGGAGTGGTTTGGTGACGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR GCA 90 bp GAGCGCAGTCTCTCATTCTCCAGCCCCAGCCTTGTGGGCTGTCCCGCTGGTGCTGAAAACATAGGGGGTTaGTTCATAATAGGAGGGAGA +
Preference number: 4 (lower is better)
Translates to: ERSLSFSSPSLVGCPAGAENIGG*FIIGGR
Trigger: TCTCCCTCCTATTATGAAGCAACCCCCTATGTTTTC...AGCACCAGCGGGACAGCCCACAAGGCTGGGGCTGGAGAATGAGAGACTGCGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR GCA 90 bp TGCACGAGTAGACGCTATTTCAGTATCAGGCCGCGCCAAGTGTCGAGGCTGCAGTCTGCCTCCCTTTGTTaGTGCTCCATCAAGGCTTGG +
Preference number: 4 (lower is better)
Translates to: CTSRRYFSIRPRQVSRLQSASLC*CSIKAW
Trigger: CCAAGCCTTGATGGAGCAGCAACAAAGGGAGGCAGA...CTGCAGCCTCGACACTTGGCGCGGCCTGATACTGAAATAGCGTCTACTCGTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR GCA 90 bp GAGCGCAGTCTCTCATTCTCCAGCCCCAGCCTTGTGGGCTGTCCCGCTGGTGCTCTCTCCAATTCCCGTTaGTTCTCTAAGCGTTTTTCT +
Preference number: 4 (lower is better)
Translates to: ERSLSFSSPSLVGCPAGALSNSR*FSKRFS
Trigger: AGAAAAACGCTTAGAGAAGCAACGGGAATTGGAGAG...AGCACCAGCGGGACAGCCCACAAGGCTGGGGCTGGAGAATGAGAGACTGCGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR GCA 90 bp AGCGCAGTCTCTCATTCTCCAGCCCCAGCCTTGTGGGCTGTCCCGCTGGTGCTGTTCTTTTCCTTGCTTTaGTTTCCTTGCAGCCTCATC +
Preference number: 4 (lower is better)
Translates to: SAVSHSPAPALWAVPLVLFFSLL*FPCSLI
Trigger: GATGAGGCTGCAAGGAAAGCAAAGCAAGGAAAAGAA...CAGCACCAGCGGGACAGCCCACAAGGCTGGGGCTGGAGAATGAGAGACTGCGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR GCA 90 bp CCAAGAGAGCGCAGTCTCTCATTCTCCAGCCCCAGCCTTGTGGGCTGTCCCGCTGTGGTTATCTTTCTTTaGAGTCCAGGAACAAAGGGC +
Preference number: 4 (lower is better)
Translates to: PRERSLSFSSPSLVGCPAVVIFL*SPGTKG
Trigger: GCCCTTTGTTCCTGGACTGCAAAGAAAGATAACCAC...AGCGGGACAGCCCACAAGGCTGGGGCTGGAGAATGAGAGACTGCGCTCTCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CCA 90 bp CCCAGCAGAGGTCACTGGCGTGGAATGGTTACAGCGTCACCAAACCACTCCACGGCAATGGCTGAGGAATaGACAGATTGGGCATGCTTC +
Preference number: 4 (lower is better)
Translates to: PSRGHWRGMVTASPNHSTAMAEE*TDWACF
Trigger: GAAGCATGCCCAATCTGTCCATTCCTCAGCCATTGC...CGTGGAGTGGTTTGGTGACGCTGTAACCATTCCACGCCAGTGACCTCTGCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CCA 90 bp GGCTCCTGCCACATCCAACGAAGCCATGCGAATGCCCTCTTGTTCTCCCGCTTCTGCAGCTGGAGGCAATaGCTGAGGAATGGACAGATT +
Preference number: 4 (lower is better)
Translates to: GSCHIQRSHANALLFSRFCSWRQ*LRNGQI
Trigger: AATCTGTCCATTCCTCAGCCATTGCCTCCAGCTGCA...GAAGCGGGAGAACAAGAGGGCATTCGCATGGCTTCGTTGGATGTGGCAGGAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS-3UTR CCA 90 bp GGGGCTCCTGCCACATCCAACGAAGCCATGCGAATGCCCTCTTGTTCTCCCGCTGATGAAAGGCAGGTGTaGCTCTTTCACTACTTGGAC +
Preference number: 4 (lower is better)
Translates to: GAPATSNEAMRMPSCSPADERQV*LFHYLD
Trigger: GTCCAAGTAGTGAAAGAGCCACACCTGCCTTTCATC...AGCGGGAGAACAAGAGGGCATTCGCATGGCTTCGTTGGATGTGGCAGGAGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS-3UTR CCA 90 bp TCCACGGTGGACACATTCAACCGAGCGGTAACATCTGGTGGTCTGATGCCTCATGAGGAATGGTCTGCATaGCTCTCCGGGGTGTTCTCC +
Preference number: 4 (lower is better)
Translates to: STVDTFNRAVTSGGLMPHEEWSA*LSGVFS
Trigger: GGAGAACACCCCGGAGAGCCATGCAGACCATTCCTC...ATGAGGCATCAGACCACCAGATGTTACCGCTCGGTTGAATGTGTCCACCGTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CCA 90 bp ACTGGCGTGGAATGGTTACAGCGTCACCAAACCACTCCACGGTGGACACATTCAGAGGAATGGTCTGCATaGCTCTCCGGGGTGTTCTCC +
Preference number: 4 (lower is better)
Translates to: TGVEWLQRHQTTPRWTHSEEWSA*LSGVFS
Trigger: GGAGAACACCCCGGAGAGCCATGCAGACCATTCCTC...TGAATGTGTCCACCGTGGAGTGGTTTGGTGACGCTGTAACCATTCCACGCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CCA 90 bp CCCAAGAGAGCGCAGTCTCTCATTCTCCAGCCCCAGCCTTGTGGGCTGTCCCGCGCTGATTTCACAGTATaGGTTGCTCTTTCCATTTGG +
Preference number: 4 (lower is better)
Translates to: PKRAQSLILQPQPCGLSRADFTV*VALSIW
Trigger: CCAAATGGAAAGAGCAACCCATACTGTGAAATCAGC...GCGGGACAGCCCACAAGGCTGGGGCTGGAGAATGAGAGACTGCGCTCTCTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000427234.5
ENST00000622089.4
CDS-3UTR CCA 90 bp AGCGCAGTCTCTCATTCTCCAGCCCCAGCCTTGTGGGCTGTCCCGCTGGTGCTGGCTGATTTCACAGTATaGGTTGCTCTTTCCATTTGG +
Preference number: 4 (lower is better)
Translates to: SAVSHSPAPALWAVPLVLADFTV*VALSIW
Trigger: CCAAATGGAAAGAGCAACCCATACTGTGAAATCAGC...CAGCACCAGCGGGACAGCCCACAAGGCTGGGGCTGGAGAATGAGAGACTGCGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000427234.5
ENST00000622089.4
CDS-3UTR CCA 90 bp ACTGGCGTGGAATGGTTACAGCGTCACCAAACCACTCCACGGTGGACACATTCATGTCCTGGATGGTCCTaGTGGTGTAGCTCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: TGVEWLQRHQTTPRWTHSCPGWS*WCSSGS
Trigger: GCTCCCAGAGCTACACCACCAGGACCATCCAGGACA...TGAATGTGTCCACCGTGGAGTGGTTTGGTGACGCTGTAACCATTCCACGCCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
3UTR CAA 72 bp TCCTGCCACATCCAACGAAGCCATGCGAATGCCCTCTaGTTCTCCCGCTTCACTCTGAGTGACCTCATCTGG +
Preference number: 4 (lower is better)
Translates to: SCHIQRSHANAL*FSRFTLSDLIW
Trigger: CCAGATGAGGTCACTCAGAGTGAAGCGGGAGAACAAGAGGGCATTCGCATGGCTTCGTTGGATGTGGCAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS-3UTR TCA 90 bp GTGAAGCTGCATGGTGCTCCCTCAGCCCCAAGAGAGCGCAGTCTCTCATTCTCCGGCAACTGTTGGCCTTaGAGCTTCAGTTTGATGAGT +
Preference number: 4 (lower is better)
Translates to: VKLHGAPSAPRERSLSFSGNCWP*SFSLMS
Trigger: ACTCATCAAACTGAAGCTTCAAGGCCAACAGTTGCC...GGAGAATGAGAGACTGCGCTCTCTTGGGGCTGAGGGAGCACCATGCAGCTTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR TCA 90 bp GAAGCTGCATGGTGCTCCCTCAGCCCCAAGAGAGCGCAGTCTCTCATTCTCCAGAGTCGCAGAAGACAATaGTGTTATAGGTGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: EAAWCSLSPKRAQSLILQSRRRQ*CYRCSW
Trigger: CCAGCTGCACCTATAACATCATTGTCTTCTGCGACT...CTGGAGAATGAGAGACTGCGCTCTCTTGGGGCTGAGGGAGCACCATGCAGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR TCA 90 bp CGTCCTTCCTTGATGGGGCTCCTGCCACATCCAACGAAGCCATGCGAATGCCCTTTTAATCTTGTAGGCTaGGGAACTGCCCACTCTGAG +
Preference number: 4 (lower is better)
Translates to: RPSLMGLLPHPTKPCECPFNLVG*GTAHSE
Trigger: CTCAGAGTGGGCAGTTCCTCAGCCTACAAGATTAAA...AGGGCATTCGCATGGCTTCGTTGGATGTGGCAGGAGCCCCATCAAGGAAGGACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS-3UTR TCA 90 bp GTGAAGCTGCATGGTGCTCCCTCAGCCCCAAGAGAGCGCAGTCTCTCATTCTCCTTTAATCTTGTAGGCTaGGGAACTGCCCACTCTGAG +
Preference number: 4 (lower is better)
Translates to: VKLHGAPSAPRERSLSFSFNLVG*GTAHSE
Trigger: CTCAGAGTGGGCAGTTCCTCAGCCTACAAGATTAAA...GGAGAATGAGAGACTGCGCTCTCTTGGGGCTGAGGGAGCACCATGCAGCTTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR TCA 90 bp GTCACCAAACCACTCCACGGTGGACACATTCAACCGAGCGGTAACATCTGGTGGTTGAGTCGGACATCCTaGAGTCTGCCTGAGATCTGC +
Preference number: 4 (lower is better)
Translates to: VTKPLHGGHIQPSGNIWWLSRTS*SLPEIC
Trigger: GCAGATCTCAGGCAGACTTCAGGATGTCCGACTCAA...CCACCAGATGTTACCGCTCGGTTGAATGTGTCCACCGTGGAGTGGTTTGGTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR TCA 90 bp CTCCTGCCACATCCAACGAAGCCATGCGAATGCCCTCTTGTTCTCCCGCTTCACCTGTCCATGAATAGGTaGTACAGATCCAGGGGACAC +
Preference number: 4 (lower is better)
Translates to: LLPHPTKPCECPLVLPLHLSMNR*YRSRGH
Trigger: GTGTCCCCTGGATCTGTATCACCTATTCATGGACAG...GTGAAGCGGGAGAACAAGAGGGCATTCGCATGGCTTCGTTGGATGTGGCAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS-3UTR TCA 90 bp GCGCAGTCTCTCATTCTCCAGCCCCAGCCTTGTGGGCTGTCCCGCTGGTGCTGTTCCAGGTTCCACACTTaGATATGGATAAAGTGCAAT +
Preference number: 4 (lower is better)
Translates to: AQSLILQPQPCGLSRWCCSRFHT*IWIKCN
Trigger: ATTGCACTTTATCCATATTCAAGTGTGGAACCTGGA...ACAGCACCAGCGGGACAGCCCACAAGGCTGGGGCTGGAGAATGAGAGACTGCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR TCA 90 bp GCAGAGGTCACTGGCGTGGAATGGTTACAGCGTCACCAAACCACTCCACGGTGGCATTGGACTTCGAGCTaGAAAGTTTCTCAGAGCCAG +
Preference number: 4 (lower is better)
Translates to: AEVTGVEWLQRHQTTPRWHWTSS*KVSQSQ
Trigger: CTGGCTCTGAGAAACTTTTCAGCTCGAAGTCCAATG...CCACCGTGGAGTGGTTTGGTGACGCTGTAACCATTCCACGCCAGTGACCTCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR TCA 90 bp GTCACCAAACCACTCCACGGTGGACACATTCAACCGAGCGGTAACATCTGGTGGCTCTGTCAAACAGGGTaGGACACAGCACGTCTTGGT +
Preference number: 4 (lower is better)
Translates to: VTKPLHGGHIQPSGNIWWLCQTG*DTARLG
Trigger: ACCAAGACGTGCTGTGTCTCACCCTGTTTGACAGAG...CCACCAGATGTTACCGCTCGGTTGAATGTGTCCACCGTGGAGTGGTTTGGTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR GCA 90 bp GGCTCCTGCCACATCCAACGAAGCCATGCGAATGCCCTCTTGTTCTCCCGCTTCTGGACAGATTGGGCATaGTTCCCATTCCAAAACGAG +
Preference number: 4 (lower is better)
Translates to: GSCHIQRSHANALLFSRFWTDWA*FPFQNE
Trigger: CTCGTTTTGGAATGGGAAGCATGCCCAATCTGTCCA...GAAGCGGGAGAACAAGAGGGCATTCGCATGGCTTCGTTGGATGTGGCAGGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS-3UTR GCA 90 bp GTGCTCCCTCAGCCCCAAGAGAGCGCAGTCTCTCATTCTCCAGCCCCAGCCTTGCTCTCCAATTCCCGTTaGTTCTCTAAGCGTTTTTCT +
Preference number: 4 (lower is better)
Translates to: VLPQPQESAVSHSPAPALLSNSR*FSKRFS
Trigger: AGAAAAACGCTTAGAGAAGCAACGGGAATTGGAGAG...CAAGGCTGGGGCTGGAGAATGAGAGACTGCGCTCTCTTGGGGCTGAGGGAGCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR GCA 90 bp GAGCGCAGTCTCTCATTCTCCAGCCCCAGCCTTGTGGGCTGTCCCGCTGGTGCTATGTTTGCCATTCAGTaGTTCCAACTCAAGATGAAG +
Preference number: 4 (lower is better)
Translates to: ERSLSFSSPSLVGCPAGAMFAIQ*FQLKMK
Trigger: CTTCATCTTGAGTTGGAAGCACTGAATGGCAAACAT...AGCACCAGCGGGACAGCCCACAAGGCTGGGGCTGGAGAATGAGAGACTGCGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR GCA 90 bp GTGCTCCCTCAGCCCCAAGAGAGCGCAGTCTCTCATTCTCCAGCCCCAGCCTTGATTTCCAAGTCACACTaGTTATCCAGAACTTCCAGC +
Preference number: 4 (lower is better)
Translates to: VLPQPQESAVSHSPAPALISKSH*LSRTSS
Trigger: GCTGGAAGTTCTGGATAAGCAGTGTGACTTGGAAAT...CAAGGCTGGGGCTGGAGAATGAGAGACTGCGCTCTCTTGGGGCTGAGGGAGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR GCA 90 bp GCAGAGGTCACTGGCGTGGAATGGTTACAGCGTCACCAAACCACTCCACGGTGGGCCTGTAACTCTCCTTaGCACCACCCACTTGTATTT +
Preference number: 4 (lower is better)
Translates to: AEVTGVEWLQRHQTTPRWACNSP*HHPLVF
Trigger: AAATACAAGTGGGTGGTGGCAAGGAGAGTTACAGGC...CCACCGTGGAGTGGTTTGGTGACGCTGTAACCATTCCACGCCAGTGACCTCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR GCA 90 bp GTGAAGCTGCATGGTGCTCCCTCAGCCCCAAGAGAGCGCAGTCTCTCATTCTCCGCCTGTAACTCTCCTTaGCACCACCCACTTGTATTT +
Preference number: 4 (lower is better)
Translates to: VKLHGAPSAPRERSLSFSACNSP*HHPLVF
Trigger: AAATACAAGTGGGTGGTGGCAAGGAGAGTTACAGGC...GGAGAATGAGAGACTGCGCTCTCTTGGGGCTGAGGGAGCACCATGCAGCTTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR GCA 90 bp CTTCCCCTCCTGAGTGGCTGTGACCCAGCAGAGGTCACTGGCGTGGAATGGTTACCGTTGATCTCTCCTTaGCACCAATCAGGATCATCT +
Preference number: 4 (lower is better)
Translates to: LPLLSGCDPAEVTGVEWLPLISP*HQSGSS
Trigger: AGATGATCCTGATTGGTGGCAAGGAGAGATCAACGG...TAACCATTCCACGCCAGTGACCTCTGCTGGGTCACAGCCACTCAGGAGGGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR GCA 90 bp GAAGCTGCATGGTGCTCCCTCAGCCCCAAGAGAGCGCAGTCTCTCATTCTCCAGATTGTGTCCAGGGTTTaGAGATCAGCACACCACTGT +
Preference number: 4 (lower is better)
Translates to: EAAWCSLSPKRAQSLILQIVSRV*RSAHHC
Trigger: ACAGTGGTGTGCTGATCTGCAAACCCTGGACACAAT...CTGGAGAATGAGAGACTGCGCTCTCTTGGGGCTGAGGGAGCACCATGCAGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR GCA 90 bp GTGAAGCTGCATGGTGCTCCCTCAGCCCCAAGAGAGCGCAGTCTCTCATTCTCCTTCCTCTCAATTGGCTaGATTGTGTCCAGGGTTTGC +
Preference number: 4 (lower is better)
Translates to: VKLHGAPSAPRERSLSFSFLSIG*IVSRVC
Trigger: GCAAACCCTGGACACAATGCAGCCAATTGAGAGGAA...GGAGAATGAGAGACTGCGCTCTCTTGGGGCTGAGGGAGCACCATGCAGCTTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR GCA 90 bp TGCATGGTGCTCCCTCAGCCCCAAGAGAGCGCAGTCTCTCATTCTCCAGCCCCATCTTCATCTGTCTTCTaGTGTAACAGAGCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: CMVLPQPQESAVSHSPAPSSSVF*CNRAAP
Trigger: TGGAGCAGCTCTGTTACAGCAGAAGACAGATGAAGA...TGGGGCTGGAGAATGAGAGACTGCGCTCTCTTGGGGCTGAGGGAGCACCATGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR GCA 90 bp CGTCCTTCCTTGATGGGGCTCCTGCCACATCCAACGAAGCCATGCGAATGCCCTTCAAAAGTGATGCCTTaGTTTGACTCTGCGTGGAGG +
Preference number: 4 (lower is better)
Translates to: RPSLMGLLPHPTKPCECPSKVMP*FDSAWR
Trigger: CCTCCACGCAGAGTCAAAGCAAGGCATCACTTTTGA...AGGGCATTCGCATGGCTTCGTTGGATGTGGCAGGAGCCCCATCAAGGAAGGACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS-3UTR CCA 90 bp GCAGAGGTCACTGGCGTGGAATGGTTACAGCGTCACCAAACCACTCCACGGTGGGAGGAATGGACAGATTaGGCATGCTTCCCATTCCAA +
Preference number: 4 (lower is better)
Translates to: AEVTGVEWLQRHQTTPRWEEWTD*ACFPFQ
Trigger: TTGGAATGGGAAGCATGCCCAATCTGTCCATTCCTC...CCACCGTGGAGTGGTTTGGTGACGCTGTAACCATTCCACGCCAGTGACCTCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CCA 90 bp TGCACGAGTAGACGCTATTTCAGTATCAGGCCGCGCCAAGTGTCGAGGCTGCAGTGCAGCTGGAGGCAATaGCTGAGGAATGGACAGATT +
Preference number: 4 (lower is better)
Translates to: CTSRRYFSIRPRQVSRLQCSWRQ*LRNGQI
Trigger: AATCTGTCCATTCCTCAGCCATTGCCTCCAGCTGCA...CTGCAGCCTCGACACTTGGCGCGGCCTGATACTGAAATAGCGTCTACTCGTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CCA 90 bp CGTCCTTCCTTGATGGGGCTCCTGCCACATCCAACGAAGCCATGCGAATGCCCTTGTTATAGGTGCAGCTaGAGGCAATGGCTGAGGAAT +
Preference number: 4 (lower is better)
Translates to: RPSLMGLLPHPTKPCECPCYRCS*RQWLRN
Trigger: ATTCCTCAGCCATTGCCTCCAGCTGCACCTATAACA...AGGGCATTCGCATGGCTTCGTTGGATGTGGCAGGAGCCCCATCAAGGAAGGACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS-3UTR CCA 90 bp GGCTCCTGCCACATCCAACGAAGCCATGCGAATGCCCTCTTGTTCTCCCGCTTCTCCCTCGCTCATAGTTaGCTTTCCGTTTGTCCTCAA +
Preference number: 4 (lower is better)
Translates to: GSCHIQRSHANALLFSRFSLAHS*LSVCPQ
Trigger: TTGAGGACAAACGGAAAGCCAACTATGAGCGAGGGA...GAAGCGGGAGAACAAGAGGGCATTCGCATGGCTTCGTTGGATGTGGCAGGAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS-3UTR CCA 90 bp ACTGGCGTGGAATGGTTACAGCGTCACCAAACCACTCCACGGTGGACACATTCATGCTCCATCAAGGCTTaGCGTCGCTTTTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: TGVEWLQRHQTTPRWTHSCSIKA*RRFSSS
Trigger: GGAGCTGGAAAAGCGACGCCAAGCCTTGATGGAGCA...TGAATGTGTCCACCGTGGAGTGGTTTGGTGACGCTGTAACCATTCCACGCCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CCA 90 bp CTGCATGGTGCTCCCTCAGCCCCAAGAGAGCGCAGTCTCTCATTCTCCAGCCCCAAACTCATCTCATCATaGTTCCTTGCTTCAAAGGGG +
Preference number: 4 (lower is better)
Translates to: LHGAPSAPRERSLSFSSPKLISS*FLASKG
Trigger: CCCCTTTGAAGCAAGGAACCATGATGAGATGAGTTT...GGGGCTGGAGAATGAGAGACTGCGCTCTCTTGGGGCTGAGGGAGCACCATGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CCA 90 bp GAGCGCAGTCTCTCATTCTCCAGCCCCAGCCTTGTGGGCTGTCCCGCTGGTGCTGGCTCTTTCACTACTTaGACCCAAAAGTTTAACATG +
Preference number: 4 (lower is better)
Translates to: ERSLSFSSPSLVGCPAGAGSFTT*TQKFNM
Trigger: CATGTTAAACTTTTGGGTCCAAGTAGTGAAAGAGCC...AGCACCAGCGGGACAGCCCACAAGGCTGGGGCTGGAGAATGAGAGACTGCGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CCA 90 bp CTTCCCCTCCTGAGTGGCTGTGACCCAGCAGAGGTCACTGGCGTGGAATGGTTAGATGAAAGGCAGGTGTaGCTCTTTCACTACTTGGAC +
Preference number: 4 (lower is better)
Translates to: LPLLSGCDPAEVTGVEWLDERQV*LFHYLD
Trigger: GTCCAAGTAGTGAAAGAGCCACACCTGCCTTTCATC...TAACCATTCCACGCCAGTGACCTCTGCTGGGTCACAGCCACTCAGGAGGGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CCA 90 bp GTCACCAAACCACTCCACGGTGGACACATTCAACCGAGCGGTAACATCTGGTGGGCTGCTCCATTAAGCTaGCAGCTGCAGAACCTGATG +
Preference number: 4 (lower is better)
Translates to: VTKPLHGGHIQPSGNIWWAAPLS*QLQNLM
Trigger: CATCAGGTTCTGCAGCTGCCAGCTTAATGGAGCAGC...CCACCAGATGTTACCGCTCGGTTGAATGTGTCCACCGTGGAGTGGTTTGGTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CCA 90 bp TCCACGGTGGACACATTCAACCGAGCGGTAACATCTGGTGGTCTGATGCCTCATAGCTTTAGGGAGGAATaGTCTGCATGGCTCTCCGGG +
Preference number: 4 (lower is better)
Translates to: STVDTFNRAVTSGGLMPHSFREE*SAWLSG
Trigger: CCCGGAGAGCCATGCAGACCATTCCTCCCTAAAGCT...ATGAGGCATCAGACCACCAGATGTTACCGCTCGGTTGAATGTGTCCACCGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CCA 90 bp ACAGCGTCACCAAACCACTCCACGGTGGACACATTCAACCGAGCGGTAACATCTAGACAGGCTCATCGCTaGAAGGGTCTGTGGGCAGTT +
Preference number: 4 (lower is better)
Translates to: TASPNHSTVDTFNRAVTSRQAHR*KGLWAV
Trigger: AACTGCCCACAGACCCTTCCAGCGATGAGCCTGTCT...AGATGTTACCGCTCGGTTGAATGTGTCCACCGTGGAGTGGTTTGGTGACGCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CCA 90 bp CCTCAGCCCCAAGAGAGCGCAGTCTCTCATTCTCCAGCCCCAGCCTTGTGGGCTGCTGATTTCACAGTATaGGTTGCTCTTTCCATTTGG +
Preference number: 4 (lower is better)
Translates to: PQPQESAVSHSPAPALWAADFTV*VALSIW
Trigger: CCAAATGGAAAGAGCAACCCATACTGTGAAATCAGC...AGCCCACAAGGCTGGGGCTGGAGAATGAGAGACTGCGCTCTCTTGGGGCTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000427234.5
ENST00000622089.4
CDS-3UTR CCA 90 bp CTTCCCCTCCTGAGTGGCTGTGACCCAGCAGAGGTCACTGGCGTGGAATGGTTAAGCGGTAACATCTGGTaGTCTGATGCCTCATTTCCA +
Preference number: 4 (lower is better)
Translates to: LPLLSGCDPAEVTGVEWLSGNIW*SDASFP
Trigger: TGGAAATGAGGCATCAGACCACCAGATGTTACCGCT...TAACCATTCCACGCCAGTGACCTCTGCTGGGTCACAGCCACTCAGGAGGGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR TCA 90 bp GAGCGCAGTCTCTCATTCTCCAGCCCCAGCCTTGTGGGCTGTCCCGCTGGTGCTTGTTATGTAACCTCCTaGAGGTTTGAGGTTATCAAA +
Preference number: 4 (lower is better)
Translates to: ERSLSFSSPSLVGCPAGACYVTS*RFEVIK
Trigger: TTTGATAACCTCAAACCTTCAGGAGGTTACATAACA...AGCACCAGCGGGACAGCCCACAAGGCTGGGGCTGGAGAATGAGAGACTGCGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR TCA 90 bp TGCACGAGTAGACGCTATTTCAGTATCAGGCCGCGCCAAGTGTCGAGGCTGCAGTTTAATCTTGTAGGCTaGGGAACTGCCCACTCTGAG +
Preference number: 4 (lower is better)
Translates to: CTSRRYFSIRPRQVSRLQFNLVG*GTAHSE
Trigger: CTCAGAGTGGGCAGTTCCTCAGCCTACAAGATTAAA...CTGCAGCCTCGACACTTGGCGCGGCCTGATACTGAAATAGCGTCTACTCGTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR TCA 90 bp CTGCATGGTGCTCCCTCAGCCCCAAGAGAGCGCAGTCTCTCATTCTCCAGCCCCTCTAGCTTGAAAACCTaGGAGATATCCACTCATACT +
Preference number: 4 (lower is better)
Translates to: LHGAPSAPRERSLSFSSPSSLKT*EISTHT
Trigger: AGTATGAGTGGATATCTCTCAGGTTTTCAAGCTAGA...GGGGCTGGAGAATGAGAGACTGCGCTCTCTTGGGGCTGAGGGAGCACCATGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR TCA 90 bp CCAAGAGAGCGCAGTCTCTCATTCTCCAGCCCCAGCCTTGTGGGCTGTCCCGCTTCTAGCTTGAAAACCTaGGAGATATCCACTCATACT +
Preference number: 4 (lower is better)
Translates to: PRERSLSFSSPSLVGCPASSLKT*EISTHT
Trigger: AGTATGAGTGGATATCTCTCAGGTTTTCAAGCTAGA...AGCGGGACAGCCCACAAGGCTGGGGCTGGAGAATGAGAGACTGCGCTCTCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR TCA 90 bp CTCTATCCCCGTCCTTCCTTGATGGGGCTCCTGCCACATCCAACGAAGCCATGCCTCTATTCTTTTGATTaGGAAGCTCCTGTCGCCGAA +
Preference number: 4 (lower is better)
Translates to: LYPRPSLMGLLPHPTKPCLYSFD*EAPVAE
Trigger: TTCGGCGACAGGAGCTTCTCAATCAAAAGAATAGAG...GCATGGCTTCGTTGGATGTGGCAGGAGCCCCATCAAGGAAGGACGGGGATAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS-3UTR TCA 90 bp ACAGCGTCACCAAACCACTCCACGGTGGACACATTCAACCGAGCGGTAACATCTTTGAGTCGGACATCCTaGAGTCTGCCTGAGATCTGC +
Preference number: 4 (lower is better)
Translates to: TASPNHSTVDTFNRAVTSLSRTS*SLPEIC
Trigger: GCAGATCTCAGGCAGACTTCAGGATGTCCGACTCAA...AGATGTTACCGCTCGGTTGAATGTGTCCACCGTGGAGTGGTTTGGTGACGCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR TCA 90 bp GTCACCAAACCACTCCACGGTGGACACATTCAACCGAGCGGTAACATCTGGTGGCTGTCCATGAATAGGTaGTACAGATCCAGGGGACAC +
Preference number: 4 (lower is better)
Translates to: VTKPLHGGHIQPSGNIWWLSMNR*YRSRGH
Trigger: GTGTCCCCTGGATCTGTATCACCTATTCATGGACAG...CCACCAGATGTTACCGCTCGGTTGAATGTGTCCACCGTGGAGTGGTTTGGTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR TCA 90 bp CTCTATCCCCGTCCTTCCTTGATGGGGCTCCTGCCACATCCAACGAAGCCATGCACTTGTCCCTGTCCATaGATAGGTGATACAGATCCA +
Preference number: 4 (lower is better)
Translates to: LYPRPSLMGLLPHPTKPCTCPCP*IGDTDP
Trigger: TGGATCTGTATCACCTATTCATGGACAGGGACAAGT...GCATGGCTTCGTTGGATGTGGCAGGAGCCCCATCAAGGAAGGACGGGGATAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS-3UTR TCA 90 bp GACCCAGCAGAGGTCACTGGCGTGGAATGGTTACAGCGTCACCAAACCACTCCAATATTCTTCTCCAACTaGATAGGCTGCCGAGGTAGG +
Preference number: 4 (lower is better)
Translates to: DPAEVTGVEWLQRHQTTPIFFSN*IGCRGR
Trigger: CCTACCTCGGCAGCCTATTCAGTTGGAGAAGAATAT...TGGAGTGGTTTGGTGACGCTGTAACCATTCCACGCCAGTGACCTCTGCTGGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR TCA 90 bp AGGCCCTTCCCATCCACTCTATCCCCGTCCTTCCTTGATGGGGCTCCTGCCACAGTCCCTTGGAGAAACTaGGCTCATCTTCATTATTTG +
Preference number: 4 (lower is better)
Translates to: RPFPSTLSPSFLDGAPATVPWRN*AHLHYL
Trigger: CAAATAATGAAGATGAGCTCAGTTTCTCCAAGGGAC...TGTGGCAGGAGCCCCATCAAGGAAGGACGGGGATAGAGTGGATGGGAAGGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS-3UTR TCA 90 bp GTCACCAAACCACTCCACGGTGGACACATTCAACCGAGCGGTAACATCTGGTGGTTCAGTGAGAAAGCCTaGCTCTGCCATGCGTTTCTG +
Preference number: 4 (lower is better)
Translates to: VTKPLHGGHIQPSGNIWWFSEKA*LCHAFL
Trigger: CAGAAACGCATGGCAGAGTCAGGCTTTCTCACTGAA...CCACCAGATGTTACCGCTCGGTTGAATGTGTCCACCGTGGAGTGGTTTGGTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR TCA 90 bp TGCACGAGTAGACGCTATTTCAGTATCAGGCCGCGCCAAGTGTCGAGGCTGCAGGAAGCAGGAAGTCATTaGAGAGGAATCCGTGCAGTT +
Preference number: 4 (lower is better)
Translates to: CTSRRYFSIRPRQVSRLQEAGSH*RGIRAV
Trigger: AACTGCACGGATTCCTCTTCAATGACTTCCTGCTTC...CTGCAGCCTCGACACTTGGCGCGGCCTGATACTGAAATAGCGTCTACTCGTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR TCA 90 bp CCCAAGAGAGCGCAGTCTCTCATTCTCCAGCCCCAGCCTTGTGGGCTGTCCCGCTTATACATTTTGAATTaGGCATTGGACTTCGAGCTG +
Preference number: 4 (lower is better)
Translates to: PKRAQSLILQPQPCGLSRLYILN*ALDFEL
Trigger: CAGCTCGAAGTCCAATGCTCAATTCAAAATGTATAA...GCGGGACAGCCCACAAGGCTGGGGCTGGAGAATGAGAGACTGCGCTCTCTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000427234.5
ENST00000622089.4
CDS-3UTR TCA 90 bp ACAAACAGAGCTGAACATGTGAACACTAGGACAAGGCACTGTACTATGGGGTTTGCTCAGACGCCGCCTTaGTCTTCTGCACCCAGGCGG +
Preference number: 4 (lower is better)
Translates to: TNRAEHVNTRTRHCTMGFAQTPP*SSAPRR
Trigger: CCGCCTGGGTGCAGAAGATCAAGGCGGCGTCTGAGC...AAACCCCATAGTACAGTGCCTTGTCCTAGTGTTCACATGTTCAGCTCTGTTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000427234.5
ENST00000622089.4
CDS-3UTR TCA 90 bp GGGGCTCCTGCCACATCCAACGAAGCCATGCGAATGCCCTCTTGTTCTCCCGCTTTCACACATCAAAAGTaGTGCCTTGCTTTGACTCTG +
Preference number: 4 (lower is better)
Translates to: GAPATSNEAMRMPSCSPAFTHQK*CLALTL
Trigger: CAGAGTCAAAGCAAGGCATCACTTTTGATGTGTGAA...AGCGGGAGAACAAGAGGGCATTCGCATGGCTTCGTTGGATGTGGCAGGAGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS-3UTR GCA 90 bp TGCATGGTGCTCCCTCAGCCCCAAGAGAGCGCAGTCTCTCATTCTCCAGCCCCATCAAACTGCCTGTCATaGTTAGTACGTTCTTCAGAG +
Preference number: 4 (lower is better)
Translates to: CMVLPQPQESAVSHSPAPSNCLS*LVRSSE
Trigger: CTCTGAAGAACGTACTAAGCATGACAGGCAGTTTGA...TGGGGCTGGAGAATGAGAGACTGCGCTCTCTTGGGGCTGAGGGAGCACCATGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR GCA 90 bp TGCACGAGTAGACGCTATTTCAGTATCAGGCCGCGCCAAGTGTCGAGGCTGCAGTGGACAGATTGGGCATaGTTCCCATTCCAAAACGAG +
Preference number: 4 (lower is better)
Translates to: CTSRRYFSIRPRQVSRLQWTDWA*FPFQNE
Trigger: CTCGTTTTGGAATGGGAAGCATGCCCAATCTGTCCA...CTGCAGCCTCGACACTTGGCGCGGCCTGATACTGAAATAGCGTCTACTCGTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR GCA 90 bp GAGCGCAGTCTCTCATTCTCCAGCCCCAGCCTTGTGGGCTGTCCCGCTGGTGCTAAATCAATCAGAGACTaGGCTTTCTGTATACTAGCA +
Preference number: 4 (lower is better)
Translates to: ERSLSFSSPSLVGCPAGAKSIRD*AFCILA
Trigger: TGCTAGTATACAGAAAGCGCAGTCTCTGATTGATTT...AGCACCAGCGGGACAGCCCACAAGGCTGGGGCTGGAGAATGAGAGACTGCGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR GCA 90 bp CCAAGAGAGCGCAGTCTCTCATTCTCCAGCCCCAGCCTTGTGGGCTGTCCCGCTGTCAGTAAGGTGCATTaGAAGAATAAACTCTTCTGC +
Preference number: 4 (lower is better)
Translates to: PRERSLSFSSPSLVGCPAVSKVH*KNKLFC
Trigger: GCAGAAGAGTTTATTCTTGCAATGCACCTTACTGAC...AGCGGGACAGCCCACAAGGCTGGGGCTGGAGAATGAGAGACTGCGCTCTCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR GCA 90 bp GTGCTCCCTCAGCCCCAAGAGAGCGCAGTCTCTCATTCTCCAGCCCCAGCCTTGGTCAGTAAGGTGCATTaGAAGAATAAACTCTTCTGC +
Preference number: 4 (lower is better)
Translates to: VLPQPQESAVSHSPAPALVSKVH*KNKLFC
Trigger: GCAGAAGAGTTTATTCTTGCAATGCACCTTACTGAC...CAAGGCTGGGGCTGGAGAATGAGAGACTGCGCTCTCTTGGGGCTGAGGGAGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR GCA 90 bp ACTGGCGTGGAATGGTTACAGCGTCACCAAACCACTCCACGGTGGACACATTCACTGGGCTTTACGTTCTaGCTCCCTTTGTTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: TGVEWLQRHQTTPRWTHSLGFTF*LPLLLL
Trigger: GAGCAGCAACAAAGGGAGGCAGAACGTAAAGCCCAG...TGAATGTGTCCACCGTGGAGTGGTTTGGTGACGCTGTAACCATTCCACGCCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR GCA 90 bp TGCACGAGTAGACGCTATTTCAGTATCAGGCCGCGCCAAGTGTCGAGGCTGCAGGGACATCCTGAAGTCTaGCTGAGATCTGCTGATGTT +
Preference number: 4 (lower is better)
Translates to: CTSRRYFSIRPRQVSRLQGHPEV*LRSADV
Trigger: AACATCAGCAGATCTCAGGCAGACTTCAGGATGTCC...CTGCAGCCTCGACACTTGGCGCGGCCTGATACTGAAATAGCGTCTACTCGTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR GCA 90 bp CCCAAGAGAGCGCAGTCTCTCATTCTCCAGCCCCAGCCTTGTGGGCTGTCCCGCCACCAATTTTCTTGCTaGTCCAAGACAGTAATAATG +
Preference number: 4 (lower is better)
Translates to: PKRAQSLILQPQPCGLSRHQFSC*SKTVIM
Trigger: CATTATTACTGTCTTGGAGCAGCAAGAAAATTGGTG...GCGGGACAGCCCACAAGGCTGGGGCTGGAGAATGAGAGACTGCGCTCTCTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR GCA 90 bp GAGCGCAGTCTCTCATTCTCCAGCCCCAGCCTTGTGGGCTGTCCCGCTGGTGCTAACCACCAATTTTCTTaGTGCTCCAAGACAGTAATA +
Preference number: 4 (lower is better)
Translates to: ERSLSFSSPSLVGCPAGANHQFS*CSKTVI
Trigger: TATTACTGTCTTGGAGCAGCAAGAAAATTGGTGGTT...AGCACCAGCGGGACAGCCCACAAGGCTGGGGCTGGAGAATGAGAGACTGCGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR GCA 90 bp AGAGGTCACTGGCGTGGAATGGTTACAGCGTCACCAAACCACTCCACGGTGGACATTGTGTCCAGGGTTTaGAGATCAGCACACCACTGT +
Preference number: 4 (lower is better)
Translates to: RGHWRGMVTASPNHSTVDIVSRV*RSAHHC
Trigger: ACAGTGGTGTGCTGATCTGCAAACCCTGGACACAAT...GTCCACCGTGGAGTGGTTTGGTGACGCTGTAACCATTCCACGCCAGTGACCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR GCA 90 bp TGCACGAGTAGACGCTATTTCAGTATCAGGCCGCGCCAAGTGTCGAGGCTGCAGTTCCTCTCAATTGGCTaGATTGTGTCCAGGGTTTGC +
Preference number: 4 (lower is better)
Translates to: CTSRRYFSIRPRQVSRLQFLSIG*IVSRVC
Trigger: GCAAACCCTGGACACAATGCAGCCAATTGAGAGGAA...CTGCAGCCTCGACACTTGGCGCGGCCTGATACTGAAATAGCGTCTACTCGTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR GCA 90 bp GACCCAGCAGAGGTCACTGGCGTGGAATGGTTACAGCGTCACCAAACCACTCCAAGCCTGACTCTGCCATaGGTTTCTGAAAAACCTCGA +
Preference number: 4 (lower is better)
Translates to: DPAEVTGVEWLQRHQTTPSLTLP*VSEKPR
Trigger: TCGAGGTTTTTCAGAAACGCATGGCAGAGTCAGGCT...TGGAGTGGTTTGGTGACGCTGTAACCATTCCACGCCAGTGACCTCTGCTGGGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR GCA 90 bp GCAGAGGTCACTGGCGTGGAATGGTTACAGCGTCACCAAACCACTCCACGGTGGTCTTCATCTGTCTTCTaGTGTAACAGAGCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: AEVTGVEWLQRHQTTPRWSSSVF*CNRAAP
Trigger: TGGAGCAGCTCTGTTACAGCAGAAGACAGATGAAGA...CCACCGTGGAGTGGTTTGGTGACGCTGTAACCATTCCACGCCAGTGACCTCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR GCA 90 bp GTGCTCCCTCAGCCCCAAGAGAGCGCAGTCTCTCATTCTCCAGCCCCAGCCTTGCGTGCAGTTCCTTGTTaGTCTTGGTCTTGTATAATT +
Preference number: 4 (lower is better)
Translates to: VLPQPQESAVSHSPAPALRAVPC*SWSCII
Trigger: AATTATACAAGACCAAGAGCAACAAGGAACTGCACG...CAAGGCTGGGGCTGGAGAATGAGAGACTGCGCTCTCTTGGGGCTGAGGGAGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR GCA 90 bp CCTCAGCCCCAAGAGAGCGCAGTCTCTCATTCTCCAGCCCCAGCCTTGTGGGCTCGTGCAGTTCCTTGTTaGTCTTGGTCTTGTATAATT +
Preference number: 4 (lower is better)
Translates to: PQPQESAVSHSPAPALWARAVPC*SWSCII
Trigger: AATTATACAAGACCAAGAGCAACAAGGAACTGCACG...AGCCCACAAGGCTGGGGCTGGAGAATGAGAGACTGCGCTCTCTTGGGGCTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR GCA 90 bp CCTCAGCCCCAAGAGAGCGCAGTCTCTCATTCTCCAGCCCCAGCCTTGTGGGCTTTTCACAGTATGGGTTaGTCTTTCCATTTGGTTTGC +
Preference number: 4 (lower is better)
Translates to: PQPQESAVSHSPAPALWAFHSMG*SFHLVC
Trigger: GCAAACCAAATGGAAAGAGCAACCCATACTGTGAAA...AGCCCACAAGGCTGGGGCTGGAGAATGAGAGACTGCGCTCTCTTGGGGCTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000427234.5
ENST00000622089.4
CDS-3UTR CCA 90 bp GACCCAGCAGAGGTCACTGGCGTGGAATGGTTACAGCGTCACCAAACCACTCCATGTTATAGGTGCAGCTaGAGGCAATGGCTGAGGAAT +
Preference number: 4 (lower is better)
Translates to: DPAEVTGVEWLQRHQTTPCYRCS*RQWLRN
Trigger: ATTCCTCAGCCATTGCCTCCAGCTGCACCTATAACA...TGGAGTGGTTTGGTGACGCTGTAACCATTCCACGCCAGTGACCTCTGCTGGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CCA 90 bp AGAGGTCACTGGCGTGGAATGGTTACAGCGTCACCAAACCACTCCACGGTGGACGATGAAAGGCAGGTGTaGCTCTTTCACTACTTGGAC +
Preference number: 4 (lower is better)
Translates to: RGHWRGMVTASPNHSTVDDERQV*LFHYLD
Trigger: GTCCAAGTAGTGAAAGAGCCACACCTGCCTTTCATC...GTCCACCGTGGAGTGGTTTGGTGACGCTGTAACCATTCCACGCCAGTGACCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CCA 90 bp TCCACGGTGGACACATTCAACCGAGCGGTAACATCTGGTGGTCTGATGCCTCATACTTCTGATGAGCAGTaGGTAGCGGGTGATCCTCTG +
Preference number: 4 (lower is better)
Translates to: STVDTFNRAVTSGGLMPHTSDEQ*VAGDPL
Trigger: CAGAGGATCACCCGCTACCCACTGCTCATCAGAAGT...ATGAGGCATCAGACCACCAGATGTTACCGCTCGGTTGAATGTGTCCACCGTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CCA 90 bp AGTCGGCGGGTCATAGGGCCTTTGCTTTCCTGTTCTGTTCGAATTTTTGCCACTTGTCCTGGATGGTCCTaGTGGTGTAGCTCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: SRRVIGPLLSCSVRIFATCPGWS*WCSSGS
Trigger: GCTCCCAGAGCTACACCACCAGGACCATCCAGGACA...AGTGGCAAAAATTCGAACAGAACAGGAAAGCAAAGGCCCTATGACCCGCCGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427234.5
CDS-3UTR CCA 90 bp CTTCCCCTCCTGAGTGGCTGTGACCCAGCAGAGGTCACTGGCGTGGAATGGTTATCATCTGGTGAAAACTaGTCTCTGTCAAACAGGGTG +
Preference number: 4 (lower is better)
Translates to: LPLLSGCDPAEVTGVEWLSSGEN*SLSNRV
Trigger: CACCCTGTTTGACAGAGACCAGTTTTCACCAGATGA...TAACCATTCCACGCCAGTGACCTCTGCTGGGTCACAGCCACTCAGGAGGGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CCA 90 bp GAAGCTGCATGGTGCTCCCTCAGCCCCAAGAGAGCGCAGTCTCTCATTCTCCAGTCATCTGGTGAAAACTaGTCTCTGTCAAACAGGGTG +
Preference number: 4 (lower is better)
Translates to: EAAWCSLSPKRAQSLILQSSGEN*SLSNRV
Trigger: CACCCTGTTTGACAGAGACCAGTTTTCACCAGATGA...CTGGAGAATGAGAGACTGCGCTCTCTTGGGGCTGAGGGAGCACCATGCAGCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000427234.5
ENST00000622089.4
CDS-3UTR CCA 90 bp GAGCGCAGTCTCTCATTCTCCAGCCCCAGCCTTGTGGGCTGTCCCGCTGGTGCTGGTTTGGTTTCTTTATaGGAAAGGTGTTTGCATAGA +
Preference number: 4 (lower is better)
Translates to: ERSLSFSSPSLVGCPAGAGLVSL*ERCLHR
Trigger: TCTATGCAAACACCTTTCCCATAAAGAAACCAAACC...AGCACCAGCGGGACAGCCCACAAGGCTGGGGCTGGAGAATGAGAGACTGCGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000427234.5
ENST00000622089.4
CDS-3UTR CCA 90 bp AGCGCAGTCTCTCATTCTCCAGCCCCAGCCTTGTGGGCTGTCCCGCTGGTGCTGGGTTTGGTTTCTTTATaGGAAAGGTGTTTGCATAGA +
Preference number: 4 (lower is better)
Translates to: SAVSHSPAPALWAVPLVLGLVSL*ERCLHR
Trigger: TCTATGCAAACACCTTTCCCATAAAGAAACCAAACC...CAGCACCAGCGGGACAGCCCACAAGGCTGGGGCTGGAGAATGAGAGACTGCGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000427234.5
ENST00000622089.4
CDS-3UTR CCA 90 bp TCCACGGTGGACACATTCAACCGAGCGGTAACATCTGGTGGTCTGATGCCTCATGTCACTGGCGTGGAATaGTTACAGCGTCACCAAACC +
Preference number: 4 (lower is better)
Translates to: STVDTFNRAVTSGGLMPHVTGVE*LQRHQT
Trigger: GGTTTGGTGACGCTGTAACCATTCCACGCCAGTGAC...ATGAGGCATCAGACCACCAGATGTTACCGCTCGGTTGAATGTGTCCACCGTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
3UTR CAA 72 bp ACCTCATGCAGCAGCAGTCGGCGGGTCATAGGGCCTTaGCTTTCCTGTTCTGTTCGAATTTTTGCCACTGGA +
Preference number: 4 (lower is better)
Translates to: TSCSSSRRVIGP*LSCSVRIFATG
Trigger: TCCAGTGGCAAAAATTCGAACAGAACAGGAAAGCAAAGGCCCTATGACCCGCCGACTGCTGCTGCATGAGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427234.5
CDS-3UTR TCA 90 bp CCCAGCAGAGGTCACTGGCGTGGAATGGTTACAGCGTCACCAAACCACTCCACGAGGGCATTTCTAGCTTaGAAACCTGAGAGATATCCA +
Preference number: 4 (lower is better)
Translates to: PSRGHWRGMVTASPNHSTRAFLA*KPERYP
Trigger: TGGATATCTCTCAGGTTTTCAAGCTAGAAATGCCCT...CGTGGAGTGGTTTGGTGACGCTGTAACCATTCCACGCCAGTGACCTCTGCTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR TCA 90 bp AGAGGTCACTGGCGTGGAATGGTTACAGCGTCACCAAACCACTCCACGGTGGACTTTGCTTTCCTCCTCTaGAAGATGGAGGAACAAGCT +
Preference number: 4 (lower is better)
Translates to: RGHWRGMVTASPNHSTVDFAFLL*KMEEQA
Trigger: AGCTTGTTCCTCCATCTTTCAGAGGAGGAAAGCAAA...GTCCACCGTGGAGTGGTTTGGTGACGCTGTAACCATTCCACGCCAGTGACCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR TCA 90 bp GCAGAGGTCACTGGCGTGGAATGGTTACAGCGTCACCAAACCACTCCACGGTGGACTGGTAATTTCTTCTaGGGCTCCTCTTCTTGCATT +
Preference number: 4 (lower is better)
Translates to: AEVTGVEWLQRHQTTPRWTGNFF*GSSSCI
Trigger: AATGCAAGAAGAGGAGCCTCAGAAGAAATTACCAGT...CCACCGTGGAGTGGTTTGGTGACGCTGTAACCATTCCACGCCAGTGACCTCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR TCA 90 bp ACAGCGTCACCAAACCACTCCACGGTGGACACATTCAACCGAGCGGTAACATCTATCCTGAAGTCTGCCTaGGATCTGCTGATGTTTGCC +
Preference number: 4 (lower is better)
Translates to: TASPNHSTVDTFNRAVTSILKSA*DLLMFA
Trigger: GGCAAACATCAGCAGATCTCAGGCAGACTTCAGGAT...AGATGTTACCGCTCGGTTGAATGTGTCCACCGTGGAGTGGTTTGGTGACGCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR TCA 90 bp GAAGCTGCATGGTGCTCCCTCAGCCCCAAGAGAGCGCAGTCTCTCATTCTCCAGTTTGAGTTTGCTTTTTaGGTCGGACATCCTGAAGTC +
Preference number: 4 (lower is better)
Translates to: EAAWCSLSPKRAQSLILQFEFAF*VGHPEV
Trigger: GACTTCAGGATGTCCGACTCAAAAAGCAAACTCAAA...CTGGAGAATGAGAGACTGCGCTCTCTTGGGGCTGAGGGAGCACCATGCAGCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR TCA 90 bp TGCATGGTGCTCCCTCAGCCCCAAGAGAGCGCAGTCTCTCATTCTCCAGCCCCATTTTATGAAGTAAACTaGCCCCTGAATCAGGTGTGT +
Preference number: 4 (lower is better)
Translates to: CMVLPQPQESAVSHSPAPFYEVN*PLNQVC
Trigger: ACACACCTGATTCAGGGGTCAGTTTACTTCATAAAA...TGGGGCTGGAGAATGAGAGACTGCGCTCTCTTGGGGCTGAGGGAGCACCATGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR TCA 90 bp GTCACCAAACCACTCCACGGTGGACACATTCAACCGAGCGGTAACATCTGGTGGATATTCTTCTCCAACTaGATAGGCTGCCGAGGTAGG +
Preference number: 4 (lower is better)
Translates to: VTKPLHGGHIQPSGNIWWIFFSN*IGCRGR
Trigger: CCTACCTCGGCAGCCTATTCAGTTGGAGAAGAATAT...CCACCAGATGTTACCGCTCGGTTGAATGTGTCCACCGTGGAGTGGTTTGGTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR TCA 90 bp AGAGGTCACTGGCGTGGAATGGTTACAGCGTCACCAAACCACTCCACGGTGGACCTGTTGACTTGGATCTaGGTCTGTCGTCATCTTAAC +
Preference number: 4 (lower is better)
Translates to: RGHWRGMVTASPNHSTVDLLTWI*VCRHLN
Trigger: GTTAAGATGACGACAGACTCAGATCCAAGTCAACAG...GTCCACCGTGGAGTGGTTTGGTGACGCTGTAACCATTCCACGCCAGTGACCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR TCA 90 bp AAGTTTCTGTTTTTATTCAGTGCACGAGTAGACGCTATTTCAGTATCAGGCCGCGCTCAGACGCCGCCTTaGTCTTCTGCACCCAGGCGG +
Preference number: 4 (lower is better)
Translates to: KFLFLFSARVDAISVSGRAQTPP*SSAPRR
Trigger: CCGCCTGGGTGCAGAAGATCAAGGCGGCGTCTGAGC...GCGGCCTGATACTGAAATAGCGTCTACTCGTGCACTGAATAAAAACAGAAACTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR TCA 90 bp GCAGAGGTCACTGGCGTGGAATGGTTACAGCGTCACCAAACCACTCCACGGTGGCAGGAAATCATCTGGTaGAAACTGGTCTCTGTCAAA +
Preference number: 4 (lower is better)
Translates to: AEVTGVEWLQRHQTTPRWQEIIW*KLVSVK
Trigger: TTTGACAGAGACCAGTTTTCACCAGATGATTTCCTG...CCACCGTGGAGTGGTTTGGTGACGCTGTAACCATTCCACGCCAGTGACCTCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR TCA 90 bp CGTCCTTCCTTGATGGGGCTCCTGCCACATCCAACGAAGCCATGCGAATGCCCTTTGGGTTTTCCAAACTaGTACAACCATGAGGTGAAC +
Preference number: 4 (lower is better)
Translates to: RPSLMGLLPHPTKPCECPLGFPN*YNHEVN
Trigger: GTTCACCTCATGGTTGTATCAGTTTGGAAAACCCAA...AGGGCATTCGCATGGCTTCGTTGGATGTGGCAGGAGCCCCATCAAGGAAGGACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS-3UTR GCA 90 bp AAGTGCTACTCGAATAAGGATAGCTGTCATCAGCGTAGAGGTCACTGGTATAAACGCCCGCGAACCTGTTaGGTAGCCTGTCACAGCCGC +
Preference number: 4 (lower is better)
Translates to: KCYSNKDSCHQRRGHWYKRPRTC*VACHSR
Trigger: GCGGCTGTGACAGGCTACGCAACAGGTTCGCGGGCG...TTTATACCAGTGACCTCTACGCTGATGACAGCTATCCTTATTCGAGTAGCACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS-3UTR GCA 90 bp CCTCAGCCCCAAGAGAGCGCAGTCTCTCATTCTCCAGCCCCAGCCTTGTGGGCTAAATCAATCAGAGACTaGGCTTTCTGTATACTAGCA +
Preference number: 4 (lower is better)
Translates to: PQPQESAVSHSPAPALWAKSIRD*AFCILA
Trigger: TGCTAGTATACAGAAAGCGCAGTCTCTGATTGATTT...AGCCCACAAGGCTGGGGCTGGAGAATGAGAGACTGCGCTCTCTTGGGGCTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR GCA 90 bp CCCAGCAGAGGTCACTGGCGTGGAATGGTTACAGCGTCACCAAACCACTCCACGATTTCCAAGTCACACTaGTTATCCAGAACTTCCAGC +
Preference number: 4 (lower is better)
Translates to: PSRGHWRGMVTASPNHSTISKSH*LSRTSS
Trigger: GCTGGAAGTTCTGGATAAGCAGTGTGACTTGGAAAT...CGTGGAGTGGTTTGGTGACGCTGTAACCATTCCACGCCAGTGACCTCTGCTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR GCA 90 bp CTCTATCCCCGTCCTTCCTTGATGGGGCTCCTGCCACATCCAACGAAGCCATGCTTCTTTTCCTTGCTTTaGTTTCCTTGCAGCCTCATC +
Preference number: 4 (lower is better)
Translates to: LYPRPSLMGLLPHPTKPCFFSLL*FPCSLI
Trigger: GATGAGGCTGCAAGGAAAGCAAAGCAAGGAAAAGAA...GCATGGCTTCGTTGGATGTGGCAGGAGCCCCATCAAGGAAGGACGGGGATAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS-3UTR GCA 90 bp AGAGGTCACTGGCGTGGAATGGTTACAGCGTCACCAAACCACTCCACGGTGGACGTGGTTATCTTTCTTTaGAGTCCAGGAACAAAGGGC +
Preference number: 4 (lower is better)
Translates to: RGHWRGMVTASPNHSTVDVVIFL*SPGTKG
Trigger: GCCCTTTGTTCCTGGACTGCAAAGAAAGATAACCAC...GTCCACCGTGGAGTGGTTTGGTGACGCTGTAACCATTCCACGCCAGTGACCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR GCA 90 bp GTCACCAAACCACTCCACGGTGGACACATTCAACCGAGCGGTAACATCTGGTGGCCGTTGATCTCTCCTTaGCACCAATCAGGATCATCT +
Preference number: 4 (lower is better)
Translates to: VTKPLHGGHIQPSGNIWWPLISP*HQSGSS
Trigger: AGATGATCCTGATTGGTGGCAAGGAGAGATCAACGG...CCACCAGATGTTACCGCTCGGTTGAATGTGTCCACCGTGGAGTGGTTTGGTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR GCA 90 bp GTCACCAAACCACTCCACGGTGGACACATTCAACCGAGCGGTAACATCTGGTGGATTGTGTCCAGGGTTTaGAGATCAGCACACCACTGT +
Preference number: 4 (lower is better)
Translates to: VTKPLHGGHIQPSGNIWWIVSRV*RSAHHC
Trigger: ACAGTGGTGTGCTGATCTGCAAACCCTGGACACAAT...CCACCAGATGTTACCGCTCGGTTGAATGTGTCCACCGTGGAGTGGTTTGGTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR GCA 90 bp AGTCGGCGGGTCATAGGGCCTTTGCTTTCCTGTTCTGTTCGAATTTTTGCCACTCCATCAGGCGCCCAATaGCTGAAGTCTTTTGGGAGC +
Preference number: 4 (lower is better)
Translates to: SRRVIGPLLSCSVRIFATPSGAQ*LKSFGS
Trigger: GCTCCCAAAAGACTTCAGGCATTGGGCGCCTGATGG...AGTGGCAAAAATTCGAACAGAACAGGAAAGCAAAGGCCCTATGACCCGCCGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427234.5
CDS-3UTR GCA 90 bp CCTCAGCCCCAAGAGAGCGCAGTCTCTCATTCTCCAGCCCCAGCCTTGTGGGCTTTCTGTTCGAATTTTTaGCACTGGAATTTCAGTACG +
Preference number: 4 (lower is better)
Translates to: PQPQESAVSHSPAPALWAFCSNF*HWNFST
Trigger: CGTACTGAAATTCCAGTGGCAAAAATTCGAACAGAA...AGCCCACAAGGCTGGGGCTGGAGAATGAGAGACTGCGCTCTCTTGGGGCTGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000427234.5
ENST00000622089.4
CDS-3UTR GCA 90 bp GTACTATGGGGTTTGGTTTCTTTATGGGAAAGGTGTTTGCATAGATTGCTAGCTCCGGTGGGGACCTCATaGAGCAGCAGTCGGCGGGTC +
Preference number: 4 (lower is better)
Translates to: VLWGLVSLWERCLHRLLAPVGTS*SSSRRV
Trigger: GACCCGCCGACTGCTGCTGCATGAGGTCCCCACCGG...AGCTAGCAATCTATGCAAACACCTTTCCCATAAAGAAACCAAACCCCATAGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000427234.5
ENST00000622089.4
CDS-3UTR CCA 90 bp TCCACGGTGGACACATTCAACCGAGCGGTAACATCTGGTGGTCTGATGCCTCATGCAATGGCTGAGGAATaGACAGATTGGGCATGCTTC +
Preference number: 4 (lower is better)
Translates to: STVDTFNRAVTSGGLMPHAMAEE*TDWACF
Trigger: GAAGCATGCCCAATCTGTCCATTCCTCAGCCATTGC...ATGAGGCATCAGACCACCAGATGTTACCGCTCGGTTGAATGTGTCCACCGTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CCA 90 bp ACTGGCGTGGAATGGTTACAGCGTCACCAAACCACTCCACGGTGGACACATTCATTAAGGGAGGAAGGTTaGTCCCTGAAGTCGCAGAAG +
Preference number: 4 (lower is better)
Translates to: TGVEWLQRHQTTPRWTHSLREEG*SLKSQK
Trigger: CTTCTGCGACTTCAGGGACCAACCTTCCTCCCTTAA...TGAATGTGTCCACCGTGGAGTGGTTTGGTGACGCTGTAACCATTCCACGCCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CCA 90 bp AGGCCCTTCCCATCCACTCTATCCCCGTCCTTCCTTGATGGGGCTCCTGCCACACACTCTCCATCTTTCTaGGTCACCAATATTTCTTCA +
Preference number: 4 (lower is better)
Translates to: RPFPSTLSPSFLDGAPATHSPSF*VTNISS
Trigger: TGAAGAAATATTGGTGACCCAGAAAGATGGAGAGTG...TGTGGCAGGAGCCCCATCAAGGAAGGACGGGGATAGAGTGGATGGGAAGGGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS-3UTR CCA 90 bp ACAGCGTCACCAAACCACTCCACGGTGGACACATTCAACCGAGCGGTAACATCTGTTTCAGCAGGAAGCTaGAGAGGGGCATTCCTTTAC +
Preference number: 4 (lower is better)
Translates to: TASPNHSTVDTFNRAVTSVSAGS*RGAFLY
Trigger: GTAAAGGAATGCCCCTCTCCAGCTTCCTGCTGAAAC...AGATGTTACCGCTCGGTTGAATGTGTCCACCGTGGAGTGGTTTGGTGACGCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CCA 90 bp AGAGGTCACTGGCGTGGAATGGTTACAGCGTCACCAAACCACTCCACGGTGGACTCATCTGGTGAAAACTaGTCTCTGTCAAACAGGGTG +
Preference number: 4 (lower is better)
Translates to: RGHWRGMVTASPNHSTVDSSGEN*SLSNRV
Trigger: CACCCTGTTTGACAGAGACCAGTTTTCACCAGATGA...GTCCACCGTGGAGTGGTTTGGTGACGCTGTAACCATTCCACGCCAGTGACCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR TCA 90 bp ACAGCGTCACCAAACCACTCCACGGTGGACACATTCAACCGAGCGGTAACATCTATGGAGAACTCTTGCTaGTCCATCTTCCCATCCTTG +
Preference number: 4 (lower is better)
Translates to: TASPNHSTVDTFNRAVTSMENSC*SIFPSL
Trigger: CAAGGATGGGAAGATGGATCAGCAAGAGTTCTCCAT...AGATGTTACCGCTCGGTTGAATGTGTCCACCGTGGAGTGGTTTGGTGACGCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR TCA 90 bp GAAGCTGCATGGTGCTCCCTCAGCCCCAAGAGAGCGCAGTCTCTCATTCTCCAGTTTTATGAAGTAAACTaGCCCCTGAATCAGGTGTGT +
Preference number: 4 (lower is better)
Translates to: EAAWCSLSPKRAQSLILQFYEVN*PLNQVC
Trigger: ACACACCTGATTCAGGGGTCAGTTTACTTCATAAAA...CTGGAGAATGAGAGACTGCGCTCTCTTGGGGCTGAGGGAGCACCATGCAGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR TCA 90 bp GACCCAGCAGAGGTCACTGGCGTGGAATGGTTACAGCGTCACCAAACCACTCCAGTCACTGATGCTGGTTaGTTTGAAGAAAGTGGTTCA +
Preference number: 4 (lower is better)
Translates to: DPAEVTGVEWLQRHQTTPVTDAG*FEESGS
Trigger: TGAACCACTTTCTTCAAATCAACCAGCATCAGTGAC...TGGAGTGGTTTGGTGACGCTGTAACCATTCCACGCCAGTGACCTCTGCTGGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR TCA 90 bp CGTCCTTCCTTGATGGGGCTCCTGCCACATCCAACGAAGCCATGCGAATGCCCTTCCAGGTTCCACACTTaGATATGGATAAAGTGCAAT +
Preference number: 4 (lower is better)
Translates to: RPSLMGLLPHPTKPCECPSRFHT*IWIKCN
Trigger: ATTGCACTTTATCCATATTCAAGTGTGGAACCTGGA...AGGGCATTCGCATGGCTTCGTTGGATGTGGCAGGAGCCCCATCAAGGAAGGACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS-3UTR TCA 90 bp TGCACGAGTAGACGCTATTTCAGTATCAGGCCGCGCCAAGTGTCGAGGCTGCAGGTCCCTTGGAGAAACTaGGCTCATCTTCATTATTTG +
Preference number: 4 (lower is better)
Translates to: CTSRRYFSIRPRQVSRLQVPWRN*AHLHYL
Trigger: CAAATAATGAAGATGAGCTCAGTTTCTCCAAGGGAC...CTGCAGCCTCGACACTTGGCGCGGCCTGATACTGAAATAGCGTCTACTCGTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR TCA 90 bp ACAAACAGAGCTGAACATGTGAACACTAGGACAAGGCACTGTACTATGGGGTTTACCTCGACGACGAGCTaGAGGTCAGCCATGTACCGC +
Preference number: 4 (lower is better)
Translates to: TNRAEHVNTRTRHCTMGFTSTTS*RSAMYR
Trigger: GCGGTACATGGCTGACCTTCAGCTCGTCGTCGAGGT...AAACCCCATAGTACAGTGCCTTGTCCTAGTGTTCACATGTTCAGCTCTGTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR TCA 90 bp TGCATGGTGCTCCCTCAGCCCCAAGAGAGCGCAGTCTCTCATTCTCCAGCCCCAGCGTTTTATACATTTTaGATTGAGCATTGGACTTCG +
Preference number: 4 (lower is better)
Translates to: CMVLPQPQESAVSHSPAPAFYTF*IEHWTS
Trigger: CGAAGTCCAATGCTCAATTCAAAATGTATAAAACGC...TGGGGCTGGAGAATGAGAGACTGCGCTCTCTTGGGGCTGAGGGAGCACCATGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR TCA 90 bp AAGTTTCTGTTTTTATTCAGTGCACGAGTAGACGCTATTTCAGTATCAGGCCGCCAGGCGCCCAATGCCTaGAGTCTTTTGGGAGCGGGC +
Preference number: 4 (lower is better)
Translates to: KFLFLFSARVDAISVSGRQAPNA*SLLGAG
Trigger: GCCCGCTCCCAAAAGACTTCAGGCATTGGGCGCCTG...GCGGCCTGATACTGAAATAGCGTCTACTCGTGCACTGAATAAAAACAGAAACTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR GCA 90 bp GCAGAGGTCACTGGCGTGGAATGGTTACAGCGTCACCAAACCACTCCACGGTGGTTGAGGTTATCAAACTaGCTGTCATGCTTAGTACGT +
Preference number: 4 (lower is better)
Translates to: AEVTGVEWLQRHQTTPRWLRLSN*LSCLVR
Trigger: ACGTACTAAGCATGACAGGCAGTTTGATAACCTCAA...CCACCGTGGAGTGGTTTGGTGACGCTGTAACCATTCCACGCCAGTGACCTCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR GCA 90 bp CGTCCTTCCTTGATGGGGCTCCTGCCACATCCAACGAAGCCATGCGAATGCCCTTTGAGGTTATCAAACTaGCTGTCATGCTTAGTACGT +
Preference number: 4 (lower is better)
Translates to: RPSLMGLLPHPTKPCECPLRLSN*LSCLVR
Trigger: ACGTACTAAGCATGACAGGCAGTTTGATAACCTCAA...AGGGCATTCGCATGGCTTCGTTGGATGTGGCAGGAGCCCCATCAAGGAAGGACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS-3UTR GCA 90 bp CTCCTGCCACATCCAACGAAGCCATGCGAATGCCCTCTTGTTCTCCCGCTTCACGAAAACATAGGGGGTTaGTTCATAATAGGAGGGAGA +
Preference number: 4 (lower is better)
Translates to: LLPHPTKPCECPLVLPLHENIGG*FIIGGR
Trigger: TCTCCCTCCTATTATGAAGCAACCCCCTATGTTTTC...GTGAAGCGGGAGAACAAGAGGGCATTCGCATGGCTTCGTTGGATGTGGCAGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS-3UTR GCA 90 bp CCCAGCAGAGGTCACTGGCGTGGAATGGTTACAGCGTCACCAAACCACTCCACGGTCAGTAAGGTGCATTaGAAGAATAAACTCTTCTGC +
Preference number: 4 (lower is better)
Translates to: PSRGHWRGMVTASPNHSTVSKVH*KNKLFC
Trigger: GCAGAAGAGTTTATTCTTGCAATGCACCTTACTGAC...CGTGGAGTGGTTTGGTGACGCTGTAACCATTCCACGCCAGTGACCTCTGCTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR GCA 90 bp TCCACGGTGGACACATTCAACCGAGCGGTAACATCTGGTGGTCTGATGCCTCATGGACATCCTGAAGTCTaGCTGAGATCTGCTGATGTT +
Preference number: 4 (lower is better)
Translates to: STVDTFNRAVTSGGLMPHGHPEV*LRSADV
Trigger: AACATCAGCAGATCTCAGGCAGACTTCAGGATGTCC...ATGAGGCATCAGACCACCAGATGTTACCGCTCGGTTGAATGTGTCCACCGTGGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR GCA 90 bp GAAGCTGCATGGTGCTCCCTCAGCCCCAAGAGAGCGCAGTCTCTCATTCTCCAGTTTCACAGTATGGGTTaGTCTTTCCATTTGGTTTGC +
Preference number: 4 (lower is better)
Translates to: EAAWCSLSPKRAQSLILQFHSMG*SFHLVC
Trigger: GCAAACCAAATGGAAAGAGCAACCCATACTGTGAAA...CTGGAGAATGAGAGACTGCGCTCTCTTGGGGCTGAGGGAGCACCATGCAGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000427234.5
ENST00000622089.4
CDS-3UTR GCA 90 bp GATCAAGTTTCTGTTTTTATTCAGTGCACGAGTAGACGCTATTTCAGTATCAGGCCGGTGGGGACCTCATaGAGCAGCAGTCGGCGGGTC +
Preference number: 4 (lower is better)
Translates to: DQVSVFIQCTSRRYFSIRPVGTS*SSSRRV
Trigger: GACCCGCCGACTGCTGCTGCATGAGGTCCCCACCGG...CCTGATACTGAAATAGCGTCTACTCGTGCACTGAATAAAAACAGAAACTTGATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR GCA 90 bp ACTGGCGTGGAATGGTTACAGCGTCACCAAACCACTCCACGGTGGACACATTCAGCTAGCTATTTAGTGTaGAGGAAAACAGAGCCCCCA +
Preference number: 4 (lower is better)
Translates to: TGVEWLQRHQTTPRWTHSASYLV*RKTEPP
Trigger: TGGGGGCTCTGTTTTCCTGCACACTAAATAGCTAGC...TGAATGTGTCCACCGTGGAGTGGTTTGGTGACGCTGTAACCATTCCACGCCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CCA 90 bp TTTCACTGTTTCACAGTTCCTCCAGAGATACCAGTTTATGAAAATGTCAGATGTCCACTGCAGCTGGCTTaGTCGTCAGGCCGCCGCCCG +
Preference number: 4 (lower is better)
Translates to: FHCFTVPPEIPVYENVRCPLQLA*SSGRRP
Trigger: CGGGCGGCGGCCTGACGACCAAGCCAGCTGCAGTGG...ACATCTGACATTTTCATAAACTGGTATCTCTGGAGGAACTGTGAAACAGTGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS-3UTR CCA 90 bp TCCACGGTGGACACATTCAACCGAGCGGTAACATCTGGTGGTCTGATGCCTCATGAGGAATGGACAGATTaGGCATGCTTCCCATTCCAA +
Preference number: 4 (lower is better)
Translates to: STVDTFNRAVTSGGLMPHEEWTD*ACFPFQ
Trigger: TTGGAATGGGAAGCATGCCCAATCTGTCCATTCCTC...ATGAGGCATCAGACCACCAGATGTTACCGCTCGGTTGAATGTGTCCACCGTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CCA 90 bp ACTGGCGTGGAATGGTTACAGCGTCACCAAACCACTCCACGGTGGACACATTCATCCCTCGCTCATAGTTaGCTTTCCGTTTGTCCTCAA +
Preference number: 4 (lower is better)
Translates to: TGVEWLQRHQTTPRWTHSSLAHS*LSVCPQ
Trigger: TTGAGGACAAACGGAAAGCCAACTATGAGCGAGGGA...TGAATGTGTCCACCGTGGAGTGGTTTGGTGACGCTGTAACCATTCCACGCCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CCA 90 bp CTTCCCCTCCTGAGTGGCTGTGACCCAGCAGAGGTCACTGGCGTGGAATGGTTATGCATACAAAGCTTCTaGTTCTTCCCGTTTTACTTC +
Preference number: 4 (lower is better)
Translates to: LPLLSGCDPAEVTGVEWLCIQSF*FFPFYF
Trigger: GAAGTAAAACGGGAAGAACCAGAAGCTTTGTATGCA...TAACCATTCCACGCCAGTGACCTCTGCTGGGTCACAGCCACTCAGGAGGGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CCA 90 bp ACAGCGTCACCAAACCACTCCACGGTGGACACATTCAACCGAGCGGTAACATCTAGCGGTAACATCTGGTaGTCTGATGCCTCATTTCCA +
Preference number: 4 (lower is better)
Translates to: TASPNHSTVDTFNRAVTSSGNIW*SDASFP
Trigger: TGGAAATGAGGCATCAGACCACCAGATGTTACCGCT...AGATGTTACCGCTCGGTTGAATGTGTCCACCGTGGAGTGGTTTGGTGACGCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR TCA 90 bp CTTCCCCTCCTGAGTGGCTGTGACCCAGCAGAGGTCACTGGCGTGGAATGGTTAAGTTTGAGAAAGATTTaGCTGAAGAAGGGCATTTCT +
Preference number: 4 (lower is better)
Translates to: LPLLSGCDPAEVTGVEWLSLRKI*LKKGIS
Trigger: AGAAATGCCCTTCTTCAGTCAAATCTTTCTCAAACT...TAACCATTCCACGCCAGTGACCTCTGCTGGGTCACAGCCACTCAGGAGGGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR TCA 90 bp GTGAAGCTGCATGGTGCTCCCTCAGCCCCAAGAGAGCGCAGTCTCTCATTCTCCAGTTTGAGAAAGATTTaGCTGAAGAAGGGCATTTCT +
Preference number: 4 (lower is better)
Translates to: VKLHGAPSAPRERSLSFSSLRKI*LKKGIS
Trigger: AGAAATGCCCTTCTTCAGTCAAATCTTTCTCAAACT...GGAGAATGAGAGACTGCGCTCTCTTGGGGCTGAGGGAGCACCATGCAGCTTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR TCA 90 bp CGTCCTTCCTTGATGGGGCTCCTGCCACATCCAACGAAGCCATGCGAATGCCCTGCTTCCAACTCAAGATaGAGATTCTTCTTTTTAGAG +
Preference number: 4 (lower is better)
Translates to: RPSLMGLLPHPTKPCECPASNSR*RFFFLE
Trigger: CTCTAAAAAGAAGAATCTTCATCTTGAGTTGGAAGC...AGGGCATTCGCATGGCTTCGTTGGATGTGGCAGGAGCCCCATCAAGGAAGGACG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS-3UTR TCA 90 bp TCCACGGTGGACACATTCAACCGAGCGGTAACATCTGGTGGTCTGATGCCTCATCTGTTGACTTGGATCTaGGTCTGTCGTCATCTTAAC +
Preference number: 4 (lower is better)
Translates to: STVDTFNRAVTSGGLMPHLLTWI*VCRHLN
Trigger: GTTAAGATGACGACAGACTCAGATCCAAGTCAACAG...ATGAGGCATCAGACCACCAGATGTTACCGCTCGGTTGAATGTGTCCACCGTGGA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR TCA 90 bp GATGCCTCATTTCCAAGTAATACTTTTTATAGCCCTGAAAATGGAAACCTTGGCGCTCAGACGCCGCCTTaGTCTTCTGCACCCAGGCGG +
Preference number: 4 (lower is better)
Translates to: DASFPSNTFYSPENGNLGAQTPP*SSAPRR
Trigger: CCGCCTGGGTGCAGAAGATCAAGGCGGCGTCTGAGC...GCCAAGGTTTCCATTTTCAGGGCTATAAAAAGTATTACTTGGAAATGAGGCATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000427234.5
ENST00000622089.4
CDS-3UTR TCA 90 bp ACAAACAGAGCTGAACATGTGAACACTAGGACAAGGCACTGTACTATGGGGTTTGCGTGCATGGCTTTGTaGGGGGTGAAGCTGCATGGT +
Preference number: 4 (lower is better)
Translates to: TNRAEHVNTRTRHCTMGFACMAL*GVKLHG
Trigger: ACCATGCAGCTTCACCCCTCACAAAGCCATGCACGC...AAACCCCATAGTACAGTGCCTTGTCCTAGTGTTCACATGTTCAGCTCTGTTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000427234.5
ENST00000622089.4
CDS-3UTR GCA 90 bp TGCACGAGTAGACGCTATTTCAGTATCAGGCCGCGCCAAGTGTCGAGGCTGCAGTTGAGGTTATCAAACTaGCTGTCATGCTTAGTACGT +
Preference number: 4 (lower is better)
Translates to: CTSRRYFSIRPRQVSRLQLRLSN*LSCLVR
Trigger: ACGTACTAAGCATGACAGGCAGTTTGATAACCTCAA...CTGCAGCCTCGACACTTGGCGCGGCCTGATACTGAAATAGCGTCTACTCGTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR GCA 90 bp CCCAGCAGAGGTCACTGGCGTGGAATGGTTACAGCGTCACCAAACCACTCCACGAAATCAATCAGAGACTaGGCTTTCTGTATACTAGCA +
Preference number: 4 (lower is better)
Translates to: PSRGHWRGMVTASPNHSTKSIRD*AFCILA
Trigger: TGCTAGTATACAGAAAGCGCAGTCTCTGATTGATTT...CGTGGAGTGGTTTGGTGACGCTGTAACCATTCCACGCCAGTGACCTCTGCTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR GCA 90 bp AGAGGTCACTGGCGTGGAATGGTTACAGCGTCACCAAACCACTCCACGGTGGACATGTTTGCCATTCAGTaGTTCCAACTCAAGATGAAG +
Preference number: 4 (lower is better)
Translates to: RGHWRGMVTASPNHSTVDMFAIQ*FQLKMK
Trigger: CTTCATCTTGAGTTGGAAGCACTGAATGGCAAACAT...GTCCACCGTGGAGTGGTTTGGTGACGCTGTAACCATTCCACGCCAGTGACCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR GCA 90 bp ACAGCGTCACCAAACCACTCCACGGTGGACACATTCAACCGAGCGGTAACATCTGTGGTTATCTTTCTTTaGAGTCCAGGAACAAAGGGC +
Preference number: 4 (lower is better)
Translates to: TASPNHSTVDTFNRAVTSVVIFL*SPGTKG
Trigger: GCCCTTTGTTCCTGGACTGCAAAGAAAGATAACCAC...AGATGTTACCGCTCGGTTGAATGTGTCCACCGTGGAGTGGTTTGGTGACGCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR GCA 90 bp CTTCCCCTCCTGAGTGGCTGTGACCCAGCAGAGGTCACTGGCGTGGAATGGTTAAACCACCAATTTTCTTaGTGCTCCAAGACAGTAATA +
Preference number: 4 (lower is better)
Translates to: LPLLSGCDPAEVTGVEWLNHQFS*CSKTVI
Trigger: TATTACTGTCTTGGAGCAGCAAGAAAATTGGTGGTT...TAACCATTCCACGCCAGTGACCTCTGCTGGGTCACAGCCACTCAGGAGGGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR GCA 90 bp TGCATGGTGCTCCCTCAGCCCCAAGAGAGCGCAGTCTCTCATTCTCCAGCCCCATTTCTTATTTACAGCTaGATACAAAGCTTCTGGTTC +
Preference number: 4 (lower is better)
Translates to: CMVLPQPQESAVSHSPAPFLIYS*IQSFWF
Trigger: GAACCAGAAGCTTTGTATGCAGCTGTAAATAAGAAA...TGGGGCTGGAGAATGAGAGACTGCGCTCTCTTGGGGCTGAGGGAGCACCATGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR GCA 90 bp GGGGCTCCTGCCACATCCAACGAAGCCATGCGAATGCCCTCTTGTTCTCCCGCTTTTCTTATTTACAGCTaGATACAAAGCTTCTGGTTC +
Preference number: 4 (lower is better)
Translates to: GAPATSNEAMRMPSCSPAFLIYS*IQSFWF
Trigger: GAACCAGAAGCTTTGTATGCAGCTGTAAATAAGAAA...AGCGGGAGAACAAGAGGGCATTCGCATGGCTTCGTTGGATGTGGCAGGAGCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS-3UTR GCA 90 bp AGAGGTCACTGGCGTGGAATGGTTACAGCGTCACCAAACCACTCCACGGTGGACTTTCACAGTATGGGTTaGTCTTTCCATTTGGTTTGC +
Preference number: 4 (lower is better)
Translates to: RGHWRGMVTASPNHSTVDFHSMG*SFHLVC
Trigger: GCAAACCAAATGGAAAGAGCAACCCATACTGTGAAA...GTCCACCGTGGAGTGGTTTGGTGACGCTGTAACCATTCCACGCCAGTGACCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR GCA 90 bp GAAGCTGCATGGTGCTCCCTCAGCCCCAAGAGAGCGCAGTCTCTCATTCTCCAGTTCTGTTCGAATTTTTaGCACTGGAATTTCAGTACG +
Preference number: 4 (lower is better)
Translates to: EAAWCSLSPKRAQSLILQFCSNF*HWNFST
Trigger: CGTACTGAAATTCCAGTGGCAAAAATTCGAACAGAA...CTGGAGAATGAGAGACTGCGCTCTCTTGGGGCTGAGGGAGCACCATGCAGCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000427234.5
ENST00000622089.4
CDS-3UTR GCA 90 bp CCCAGCAGAGGTCACTGGCGTGGAATGGTTACAGCGTCACCAAACCACTCCACGTCTGTTTTTATTCAGTaGACGAGTAGACGCTATTTC +
Preference number: 4 (lower is better)
Translates to: PSRGHWRGMVTASPNHSTSVFIQ*TSRRYF
Trigger: GAAATAGCGTCTACTCGTGCACTGAATAAAAACAGA...CGTGGAGTGGTTTGGTGACGCTGTAACCATTCCACGCCAGTGACCTCTGCTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CCA 90 bp ATGATCAAGTTTCTGTTTTTATTCAGTGCACGAGTAGACGCTATTTCAGTATCACGCCGCCACTGCAGCTaGCTTGGTCGTCAGGCCGCC +
Preference number: 4 (lower is better)
Translates to: MIKFLFLFSARVDAISVSRRHCS*LGRQAA
Trigger: GGCGGCCTGACGACCAAGCCAGCTGCAGTGGCGGCG...TGATACTGAAATAGCGTCTACTCGTGCACTGAATAAAAACAGAAACTTGATCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355123.9
CDS-3UTR CCA 90 bp TGCATGGTGCTCCCTCAGCCCCAAGAGAGCGCAGTCTCTCATTCTCCAGCCCCATTTGAGAAGTTCAAGTaGTTATCTTTCTTTGCAGTC +
Preference number: 4 (lower is better)
Translates to: CMVLPQPQESAVSHSPAPFEKFK*LSFFAV
Trigger: GACTGCAAAGAAAGATAACCACTTGAACTTCTCAAA...TGGGGCTGGAGAATGAGAGACTGCGCTCTCTTGGGGCTGAGGGAGCACCATGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CCA 90 bp GGGGCTCCTGCCACATCCAACGAAGCCATGCGAATGCCCTCTTGTTCTCCCGCTTTTGAGAAGTTCAAGTaGTTATCTTTCTTTGCAGTC +
Preference number: 4 (lower is better)
Translates to: GAPATSNEAMRMPSCSPAFEKFK*LSFFAV
Trigger: GACTGCAAAGAAAGATAACCACTTGAACTTCTCAAA...AGCGGGAGAACAAGAGGGCATTCGCATGGCTTCGTTGGATGTGGCAGGAGCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS-3UTR CCA 90 bp AGAGGTCACTGGCGTGGAATGGTTACAGCGTCACCAAACCACTCCACGGTGGACGGCTCTTTCACTACTTaGACCCAAAAGTTTAACATG +
Preference number: 4 (lower is better)
Translates to: RGHWRGMVTASPNHSTVDGSFTT*TQKFNM
Trigger: CATGTTAAACTTTTGGGTCCAAGTAGTGAAAGAGCC...GTCCACCGTGGAGTGGTTTGGTGACGCTGTAACCATTCCACGCCAGTGACCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CCA 90 bp ACAGCGTCACCAAACCACTCCACGGTGGACACATTCAACCGAGCGGTAACATCTTCTTTTCCTCTCAATTaGCTGCATTGTGTCCAGGGT +
Preference number: 4 (lower is better)
Translates to: TASPNHSTVDTFNRAVTSSFPLN*LHCVQG
Trigger: ACCCTGGACACAATGCAGCCAATTGAGAGGAAAAGA...AGATGTTACCGCTCGGTTGAATGTGTCCACCGTGGAGTGGTTTGGTGACGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CCA 90 bp TGCTTTCCTGTTCTGTTCGAATTTTTGCCACTGGAATTTCAGTACGACCCAGGATGTGGGCTGTCCCGCTaGTGCTGTCCTTTAGAACCC +
Preference number: 4 (lower is better)
Translates to: CFPVLFEFLPLEFQYDPGCGLSR*CCPLEP
Trigger: GGGTTCTAAAGGACAGCACCAGCGGGACAGCCCACA...TCCTGGGTCGTACTGAAATTCCAGTGGCAAAAATTCGAACAGAACAGGAAAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427234.5
CDS-3UTR TCA 90 bp AAGTGCTACTCGAATAAGGATAGCTGTCATCAGCGTAGAGGTCACTGGTATAAAGCTGGAGGCAATGGCTaGGGAATGGACAGATTGGGC +
Preference number: 4 (lower is better)
Translates to: KCYSNKDSCHQRRGHWYKAGGNG*GMDRLG
Trigger: GCCCAATCTGTCCATTCCTCAGCCATTGCCTCCAGC...TTTATACCAGTGACCTCTACGCTGATGACAGCTATCCTTATTCGAGTAGCACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS-3UTR TCA 90 bp GTCACCAAACCACTCCACGGTGGACACATTCAACCGAGCGGTAACATCTGGTGGTCTAGCTTGAAAACCTaGGAGATATCCACTCATACT +
Preference number: 4 (lower is better)
Translates to: VTKPLHGGHIQPSGNIWWSSLKT*EISTHT
Trigger: AGTATGAGTGGATATCTCTCAGGTTTTCAAGCTAGA...CCACCAGATGTTACCGCTCGGTTGAATGTGTCCACCGTGGAGTGGTTTGGTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR TCA 90 bp TCCACGGTGGACACATTCAACCGAGCGGTAACATCTGGTGGTCTGATGCCTCATAGGGCATTTCTAGCTTaGAAACCTGAGAGATATCCA +
Preference number: 4 (lower is better)
Translates to: STVDTFNRAVTSGGLMPHRAFLA*KPERYP
Trigger: TGGATATCTCTCAGGTTTTCAAGCTAGAAATGCCCT...ATGAGGCATCAGACCACCAGATGTTACCGCTCGGTTGAATGTGTCCACCGTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR TCA 90 bp AGAGGTCACTGGCGTGGAATGGTTACAGCGTCACCAAACCACTCCACGGTGGACAGTTTGAGAAAGATTTaGCTGAAGAAGGGCATTTCT +
Preference number: 4 (lower is better)
Translates to: RGHWRGMVTASPNHSTVDSLRKI*LKKGIS
Trigger: AGAAATGCCCTTCTTCAGTCAAATCTTTCTCAAACT...GTCCACCGTGGAGTGGTTTGGTGACGCTGTAACCATTCCACGCCAGTGACCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR TCA 90 bp TCCACGGTGGACACATTCAACCGAGCGGTAACATCTGGTGGTCTGATGCCTCATGTCACTGATGCTGGTTaGTTTGAAGAAAGTGGTTCA +
Preference number: 4 (lower is better)
Translates to: STVDTFNRAVTSGGLMPHVTDAG*FEESGS
Trigger: TGAACCACTTTCTTCAAATCAACCAGCATCAGTGAC...ATGAGGCATCAGACCACCAGATGTTACCGCTCGGTTGAATGTGTCCACCGTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR TCA 90 bp GATATTAGGCAAATATCCAAGGAAGCTACGGTCTGCCATAGGCCCTTCCCATCCATATTCTTCTCCAACTaGATAGGCTGCCGAGGTAGG +
Preference number: 4 (lower is better)
Translates to: DIRQISKEATVCHRPFPSIFFSN*IGCRGR
Trigger: CCTACCTCGGCAGCCTATTCAGTTGGAGAAGAATAT...GGATGGGAAGGGCCTATGGCAGACCGTAGCTTCCTTGGATATTTGCCTAATATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS-3UTR TCA 90 bp TCCACGGTGGACACATTCAACCGAGCGGTAACATCTGGTGGTCTGATGCCTCATCATCTTAACGTAGTTTaGAGGAAAGAGACCAGTCAC +
Preference number: 4 (lower is better)
Translates to: STVDTFNRAVTSGGLMPHHLNVV*RKETSH
Trigger: GTGACTGGTCTCTTTCCTTCAAACTACGTTAAGATG...ATGAGGCATCAGACCACCAGATGTTACCGCTCGGTTGAATGTGTCCACCGTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR TCA 90 bp TGCACGAGTAGACGCTATTTCAGTATCAGGCCGCGCCAAGTGTCGAGGCTGCAGTTATACATTTTGAATTaGGCATTGGACTTCGAGCTG +
Preference number: 4 (lower is better)
Translates to: CTSRRYFSIRPRQVSRLQLYILN*ALDFEL
Trigger: CAGCTCGAAGTCCAATGCTCAATTCAAAATGTATAA...CTGCAGCCTCGACACTTGGCGCGGCCTGATACTGAAATAGCGTCTACTCGTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR TCA 90 bp TTTCCATTTGGTTTGCAGGCTTTTAATTCTGTAGCTTCAATGACATGCACCATCCAGGCGCCCAATGCCTaGAGTCTTTTGGGAGCGGGC +
Preference number: 4 (lower is better)
Translates to: FPFGLQAFNSVASMTCTIQAPNA*SLLGAG
Trigger: GCCCGCTCCCAAAAGACTTCAGGCATTGGGCGCCTG...GATGGTGCATGTCATTGAAGCTACAGAATTAAAAGCCTGCAAACCAAATGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427234.5
ENST00000449392.1
CDS-3UTR TCA 90 bp ACTGGCGTGGAATGGTTACAGCGTCACCAAACCACTCCACGGTGGACACATTCACAGGAAATCATCTGGTaGAAACTGGTCTCTGTCAAA +
Preference number: 4 (lower is better)
Translates to: TGVEWLQRHQTTPRWTHSQEIIW*KLVSVK
Trigger: TTTGACAGAGACCAGTTTTCACCAGATGATTTCCTG...TGAATGTGTCCACCGTGGAGTGGTTTGGTGACGCTGTAACCATTCCACGCCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR TCA 90 bp TCCACGGTGGACACATTCAACCGAGCGGTAACATCTGGTGGTCTGATGCCTCATCAGGAAATCATCTGGTaGAAACTGGTCTCTGTCAAA +
Preference number: 4 (lower is better)
Translates to: STVDTFNRAVTSGGLMPHQEIIW*KLVSVK
Trigger: TTTGACAGAGACCAGTTTTCACCAGATGATTTCCTG...ATGAGGCATCAGACCACCAGATGTTACCGCTCGGTTGAATGTGTCCACCGTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR TCA 90 bp AAGTTTCTGTTTTTATTCAGTGCACGAGTAGACGCTATTTCAGTATCAGGCCGCTGGCTTTGTGAGGGGTaGAGCTGCATGGTGCTCCCT +
Preference number: 4 (lower is better)
Translates to: KFLFLFSARVDAISVSGRWLCEG*SCMVLP
Trigger: AGGGAGCACCATGCAGCTTCACCCCTCACAAAGCCA...GCGGCCTGATACTGAAATAGCGTCTACTCGTGCACTGAATAAAAACAGAAACTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR GCA 90 bp ACTGGCGTGGAATGGTTACAGCGTCACCAAACCACTCCACGGTGGACACATTCATCAAACTGCCTGTCATaGTTAGTACGTTCTTCAGAG +
Preference number: 4 (lower is better)
Translates to: TGVEWLQRHQTTPRWTHSSNCLS*LVRSSE
Trigger: CTCTGAAGAACGTACTAAGCATGACAGGCAGTTTGA...TGAATGTGTCCACCGTGGAGTGGTTTGGTGACGCTGTAACCATTCCACGCCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR GCA 90 bp AGAGACTTTCAATCTCAAGCATTATCCGGCAGGCAGAGACAGCATTTGGAGGATCTGGGCTTTACGTTCTaGCTCCCTTTGTTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: RDFQSQALSGRQRQHLEDLGFTF*LPLLLL
Trigger: GAGCAGCAACAAAGGGAGGCAGAACGTAAAGCCCAG...ATCCTCCAAATGCTGTCTCTGCCTGCCGGATAATGCTTGAGATTGAAAGTCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS-3UTR GCA 90 bp ACAGCGTCACCAAACCACTCCACGGTGGACACATTCAACCGAGCGGTAACATCTCTCTCCAATTCCCGTTaGTTCTCTAAGCGTTTTTCT +
Preference number: 4 (lower is better)
Translates to: TASPNHSTVDTFNRAVTSLSNSR*FSKRFS
Trigger: AGAAAAACGCTTAGAGAAGCAACGGGAATTGGAGAG...AGATGTTACCGCTCGGTTGAATGTGTCCACCGTGGAGTGGTTTGGTGACGCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR GCA 90 bp ACAGCGTCACCAAACCACTCCACGGTGGACACATTCAACCGAGCGGTAACATCTAGATCTGCTGATGTTTaGCATTCAGTGCTTCCAACT +
Preference number: 4 (lower is better)
Translates to: TASPNHSTVDTFNRAVTSRSADV*HSVLPT
Trigger: AGTTGGAAGCACTGAATGGCAAACATCAGCAGATCT...AGATGTTACCGCTCGGTTGAATGTGTCCACCGTGGAGTGGTTTGGTGACGCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR GCA 90 bp ACAGCGTCACCAAACCACTCCACGGTGGACACATTCAACCGAGCGGTAACATCTTTCTTTTCCTTGCTTTaGTTTCCTTGCAGCCTCATC +
Preference number: 4 (lower is better)
Translates to: TASPNHSTVDTFNRAVTSFFSLL*FPCSLI
Trigger: GATGAGGCTGCAAGGAAAGCAAAGCAAGGAAAAGAA...AGATGTTACCGCTCGGTTGAATGTGTCCACCGTGGAGTGGTTTGGTGACGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR GCA 90 bp ACTGGCGTGGAATGGTTACAGCGTCACCAAACCACTCCACGGTGGACACATTCATTCTTTTCCTTGCTTTaGTTTCCTTGCAGCCTCATC +
Preference number: 4 (lower is better)
Translates to: TGVEWLQRHQTTPRWTHSFFSLL*FPCSLI
Trigger: GATGAGGCTGCAAGGAAAGCAAAGCAAGGAAAAGAA...TGAATGTGTCCACCGTGGAGTGGTTTGGTGACGCTGTAACCATTCCACGCCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR GCA 90 bp TGCACGAGTAGACGCTATTTCAGTATCAGGCCGCGCCAAGTGTCGAGGCTGCAGCACCAATTTTCTTGCTaGTCCAAGACAGTAATAATG +
Preference number: 4 (lower is better)
Translates to: CTSRRYFSIRPRQVSRLQHQFSC*SKTVIM
Trigger: CATTATTACTGTCTTGGAGCAGCAAGAAAATTGGTG...CTGCAGCCTCGACACTTGGCGCGGCCTGATACTGAAATAGCGTCTACTCGTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR GCA 90 bp TGCACGAGTAGACGCTATTTCAGTATCAGGCCGCGCCAAGTGTCGAGGCTGCAGAACCACCAATTTTCTTaGTGCTCCAAGACAGTAATA +
Preference number: 4 (lower is better)
Translates to: CTSRRYFSIRPRQVSRLQNHQFS*CSKTVI
Trigger: TATTACTGTCTTGGAGCAGCAAGAAAATTGGTGGTT...CTGCAGCCTCGACACTTGGCGCGGCCTGATACTGAAATAGCGTCTACTCGTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR GCA 90 bp GAAGCTGCATGGTGCTCCCTCAGCCCCAAGAGAGCGCAGTCTCTCATTCTCCAGCTCATCTTCATTATTTaGTGCATAGTCATACATAGC +
Preference number: 4 (lower is better)
Translates to: EAAWCSLSPKRAQSLILQLIFII*CIVIHS
Trigger: GCTATGTATGACTATGCAGCAAATAATGAAGATGAG...CTGGAGAATGAGAGACTGCGCTCTCTTGGGGCTGAGGGAGCACCATGCAGCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR GCA 90 bp CTTCCCCTCCTGAGTGGCTGTGACCCAGCAGAGGTCACTGGCGTGGAATGGTTACTCATCTTCATTATTTaGTGCATAGTCATACATAGC +
Preference number: 4 (lower is better)
Translates to: LPLLSGCDPAEVTGVEWLLIFII*CIVIHS
Trigger: GCTATGTATGACTATGCAGCAAATAATGAAGATGAG...TAACCATTCCACGCCAGTGACCTCTGCTGGGTCACAGCCACTCAGGAGGGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CCA 90 bp TCCACGGTGGACACATTCAACCGAGCGGTAACATCTGGTGGTCTGATGCCTCATAAACTCATCTCATCATaGTTCCTTGCTTCAAAGGGG +
Preference number: 4 (lower is better)
Translates to: STVDTFNRAVTSGGLMPHKLISS*FLASKG
Trigger: CCCCTTTGAAGCAAGGAACCATGATGAGATGAGTTT...ATGAGGCATCAGACCACCAGATGTTACCGCTCGGTTGAATGTGTCCACCGTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CCA 90 bp GCAGAGGTCACTGGCGTGGAATGGTTACAGCGTCACCAAACCACTCCACGGTGGTTTGAGAAGTTCAAGTaGTTATCTTTCTTTGCAGTC +
Preference number: 4 (lower is better)
Translates to: AEVTGVEWLQRHQTTPRWFEKFK*LSFFAV
Trigger: GACTGCAAAGAAAGATAACCACTTGAACTTCTCAAA...CCACCGTGGAGTGGTTTGGTGACGCTGTAACCATTCCACGCCAGTGACCTCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CCA 90 bp AAGTTTCTGTTTTTATTCAGTGCACGAGTAGACGCTATTTCAGTATCAGGCCGCGAGGAATGGTCTGCATaGCTCTCCGGGGTGTTCTCC +
Preference number: 4 (lower is better)
Translates to: KFLFLFSARVDAISVSGREEWSA*LSGVFS
Trigger: GGAGAACACCCCGGAGAGCCATGCAGACCATTCCTC...GCGGCCTGATACTGAAATAGCGTCTACTCGTGCACTGAATAAAAACAGAAACTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CCA 90 bp CTCTTTCTGTACATATGGGCAATGATAAAGCTTAAAGATGCATGTCCTAAGAAACCAGCCCCAGCCTTGTaGGCTGTCCCGCTGGTGCTG +
Preference number: 4 (lower is better)
Translates to: LFLYIWAMIKLKDACPKKPAPAL*AVPLVL
Trigger: CAGCACCAGCGGGACAGCCCACAAGGCTGGGGCTGG...TTTCTTAGGACATGCATCTTTAAGCTTTATCATTGCCCATATGTACAGAAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CCA 90 bp GATATTAGGCAAATATCCAAGGAAGCTACGGTCTGCCATAGGCCCTTCCCATCCCTGAGTGACCTCATCTaGGGGAAAGAGCTCATTAGA +
Preference number: 4 (lower is better)
Translates to: DIRQISKEATVCHRPFPSLSDLI*GKELIR
Trigger: TCTAATGAGCTCTTTCCCCCAGATGAGGTCACTCAG...GGATGGGAAGGGCCTATGGCAGACCGTAGCTTCCTTGGATATTTGCCTAATATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS-3UTR CCA 90 bp CTCCTGCCACATCCAACGAAGCCATGCGAATGCCCTCTTGTTCTCCCGCTTCACACAATATGCTCCCATTaGGTTTTCCAAACTGATACA +
Preference number: 4 (lower is better)
Translates to: LLPHPTKPCECPLVLPLHTICSH*VFQTDT
Trigger: TGTATCAGTTTGGAAAACCCAATGGGAGCATATTGT...GTGAAGCGGGAGAACAAGAGGGCATTCGCATGGCTTCGTTGGATGTGGCAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS-3UTR TCA 90 bp AGAGACTTTCAATCTCAAGCATTATCCGGCAGGCAGAGACAGCATTTGGAGGATGAGCCATCATGGTCCTaGGTTTTCCTTGCTAGCTCT +
Preference number: 4 (lower is better)
Translates to: RDFQSQALSGRQRQHLEDEPSWS*VFLASS
Trigger: AGAGCTAGCAAGGAAAACTCAGGACCATGATGGCTC...ATCCTCCAAATGCTGTCTCTGCCTGCCGGATAATGCTTGAGATTGAAAGTCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS-3UTR TCA 90 bp GTACTATGGGGTTTGGTTTCTTTATGGGAAAGGTGTTTGCATAGATTGCTAGCTGCTGGAGGCAATGGCTaGGGAATGGACAGATTGGGC +
Preference number: 4 (lower is better)
Translates to: VLWGLVSLWERCLHRLLAAGGNG*GMDRLG
Trigger: GCCCAATCTGTCCATTCCTCAGCCATTGCCTCCAGC...AGCTAGCAATCTATGCAAACACCTTTCCCATAAAGAAACCAAACCCCATAGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR TCA 90 bp AGAGACTTTCAATCTCAAGCATTATCCGGCAGGCAGAGACAGCATTTGGAGGATTGGGTAAAGGCTGAATaGGACTGGCGGTTCCATTTG +
Preference number: 4 (lower is better)
Translates to: RDFQSQALSGRQRQHLEDWVKAE*DWRFHL
Trigger: CAAATGGAACCGCCAGTCTCATTCAGCCTTTACCCA...ATCCTCCAAATGCTGTCTCTGCCTGCCGGATAATGCTTGAGATTGAAAGTCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS-3UTR TCA 90 bp TCAATCTCAAGCATTATCCGGCAGGCAGAGACAGCATTTGGAGGATGTGAGAGCTTTGCTTTCCTCCTCTaGAAGATGGAGGAACAAGCT +
Preference number: 4 (lower is better)
Translates to: SISSIIRQAETAFGGCESFAFLL*KMEEQA
Trigger: AGCTTGTTCCTCCATCTTTCAGAGGAGGAAAGCAAA...GCTCTCACATCCTCCAAATGCTGTCTCTGCCTGCCGGATAATGCTTGAGATTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS-3UTR TCA 90 bp ACTGGCGTGGAATGGTTACAGCGTCACCAAACCACTCCACGGTGGACACATTCATTTTATGAAGTAAACTaGCCCCTGAATCAGGTGTGT +
Preference number: 4 (lower is better)
Translates to: TGVEWLQRHQTTPRWTHSFYEVN*PLNQVC
Trigger: ACACACCTGATTCAGGGGTCAGTTTACTTCATAAAA...TGAATGTGTCCACCGTGGAGTGGTTTGGTGACGCTGTAACCATTCCACGCCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR TCA 90 bp TTAAAGTGCTACTCGAATAAGGATAGCTGTCATCAGCGTAGAGGTCACTGGTATGACCAGTCACCCCGTTaGTCTCTCCTTGCCACCAAT +
Preference number: 4 (lower is better)
Translates to: LKCYSNKDSCHQRRGHWYDQSPR*SLLATN
Trigger: ATTGGTGGCAAGGAGAGATCAACGGGGTGACTGGTC...ATACCAGTGACCTCTACGCTGATGACAGCTATCCTTATTCGAGTAGCACTTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS-3UTR TCA 90 bp TCAATCTCAAGCATTATCCGGCAGGCAGAGACAGCATTTGGAGGATGTGAGAGCCTGTTGACTTGGATCTaGGTCTGTCGTCATCTTAAC +
Preference number: 4 (lower is better)
Translates to: SISSIIRQAETAFGGCESLLTWI*VCRHLN
Trigger: GTTAAGATGACGACAGACTCAGATCCAAGTCAACAG...GCTCTCACATCCTCCAAATGCTGTCTCTGCCTGCCGGATAATGCTTGAGATTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS-3UTR TCA 90 bp GTACTATGGGGTTTGGTTTCTTTATGGGAAAGGTGTTTGCATAGATTGCTAGCTGCAGTGGGTAGCGGGTaGTCCTCTGCATGGGTTTCA +
Preference number: 4 (lower is better)
Translates to: VLWGLVSLWERCLHRLLAAVGSG*SSAWVS
Trigger: TGAAACCCATGCAGAGGATCACCCGCTACCCACTGC...AGCTAGCAATCTATGCAAACACCTTTCCCATAAAGAAACCAAACCCCATAGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR TCA 90 bp GTCACCAAACCACTCCACGGTGGACACATTCAACCGAGCGGTAACATCTGGTGGGCGTTTTATACATTTTaGATTGAGCATTGGACTTCG +
Preference number: 4 (lower is better)
Translates to: VTKPLHGGHIQPSGNIWWAFYTF*IEHWTS
Trigger: CGAAGTCCAATGCTCAATTCAAAATGTATAAAACGC...CCACCAGATGTTACCGCTCGGTTGAATGTGTCCACCGTGGAGTGGTTTGGTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR TCA 90 bp ACAAACAGAGCTGAACATGTGAACACTAGGACAAGGCACTGTACTATGGGGTTTTCTGGGAGCCCATGCTaGTTTCACAGTATGGGTTGC +
Preference number: 4 (lower is better)
Translates to: TNRAEHVNTRTRHCTMGFSGSPC*FHSMGC
Trigger: GCAACCCATACTGTGAAATCAGCATGGGCTCCCAGA...AAACCCCATAGTACAGTGCCTTGTCCTAGTGTTCACATGTTCAGCTCTGTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000427234.5
ENST00000622089.4
CDS-3UTR TCA 90 bp TGCTTTCCTGTTCTGTTCGAATTTTTGCCACTGGAATTTCAGTACGACCCAGGACTCTGTCAAACAGGGTaGGACACAGCACGTCTTGGT +
Preference number: 4 (lower is better)
Translates to: CFPVLFEFLPLEFQYDPGLCQTG*DTARLG
Trigger: ACCAAGACGTGCTGTGTCTCACCCTGTTTGACAGAG...TCCTGGGTCGTACTGAAATTCCAGTGGCAAAAATTCGAACAGAACAGGAAAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427234.5
CDS-3UTR TCA 90 bp CTCTTTCCATTTGGTTTGCAGGCTTTTAATTCTGTAGCTTCAATGACATGCACCTGGCTTTGTGAGGGGTaGAGCTGCATGGTGCTCCCT +
Preference number: 4 (lower is better)
Translates to: LFPFGLQAFNSVASMTCTWLCEG*SCMVLP
Trigger: AGGGAGCACCATGCAGCTTCACCCCTCACAAAGCCA...GGTGCATGTCATTGAAGCTACAGAATTAAAAGCCTGCAAACCAAATGGAAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427234.5
CDS-3UTR TCA 90 bp GTGACCTCATCTGGGGGAAAGAGCTCATTAGAGACTTTCAATCTCAAGCATTATCCGCTTCACTCTGAGTaGCCTCATCTGGGGGAAAGA +
Preference number: 4 (lower is better)
Translates to: VTSSGGKSSLETFNLKHYPLHSE*PHLGER
Trigger: TCTTTCCCCCAGATGAGGTCACTCAGAGTGAAGCGG...ATAATGCTTGAGATTGAAAGTCTCTAATGAGCTCTTTCCCCCAGATGAGGTCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS-3UTR TCA 90 bp AATAAGGATAGCTGTCATCAGCGTAGAGGTCACTGGTATAAACAAACAGTAGCTTCTCCCGCTTCACTCTaGGTGACCTCATCTGGGGGA +
Preference number: 4 (lower is better)
Translates to: NKDSCHQRRGHWYKQTVASPASL*VTSSGG
Trigger: TCCCCCAGATGAGGTCACTCAGAGTGAAGCGGGAGA...AGCTACTGTTTGTTTATACCAGTGACCTCTACGCTGATGACAGCTATCCTTATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS-3UTR GCA 90 bp ACTGGCGTGGAATGGTTACAGCGTCACCAAACCACTCCACGGTGGACACATTCATTGAGGTTATCAAACTaGCTGTCATGCTTAGTACGT +
Preference number: 4 (lower is better)
Translates to: TGVEWLQRHQTTPRWTHSLRLSN*LSCLVR
Trigger: ACGTACTAAGCATGACAGGCAGTTTGATAACCTCAA...TGAATGTGTCCACCGTGGAGTGGTTTGGTGACGCTGTAACCATTCCACGCCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR GCA 90 bp AAGTTTCTGTTTTTATTCAGTGCACGAGTAGACGCTATTTCAGTATCAGGCCGCGCCTCCCTTTGTTGCTaGTCCATCAAGGCTTGGCGT +
Preference number: 4 (lower is better)
Translates to: KFLFLFSARVDAISVSGRASLCC*SIKAWR
Trigger: ACGCCAAGCCTTGATGGAGCAGCAACAAAGGGAGGC...GCGGCCTGATACTGAAATAGCGTCTACTCGTGCACTGAATAAAAACAGAAACTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR GCA 90 bp GTGACCTCATCTGGGGGAAAGAGCTCATTAGAGACTTTCAATCTCAAGCATTATGCCTCCCTTTGTTGCTaGTCCATCAAGGCTTGGCGT +
Preference number: 4 (lower is better)
Translates to: VTSSGGKSSLETFNLKHYASLCC*SIKAWR
Trigger: ACGCCAAGCCTTGATGGAGCAGCAACAAAGGGAGGC...ATAATGCTTGAGATTGAAAGTCTCTAATGAGCTCTTTCCCCCAGATGAGGTCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS-3UTR GCA 90 bp TGCACGAGTAGACGCTATTTCAGTATCAGGCCGCGCCAAGTGTCGAGGCTGCAGTTTCTTATTTACAGCTaGATACAAAGCTTCTGGTTC +
Preference number: 4 (lower is better)
Translates to: CTSRRYFSIRPRQVSRLQFLIYS*IQSFWF
Trigger: GAACCAGAAGCTTTGTATGCAGCTGTAAATAAGAAA...CTGCAGCCTCGACACTTGGCGCGGCCTGATACTGAAATAGCGTCTACTCGTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR GCA 90 bp GACCCAGCAGAGGTCACTGGCGTGGAATGGTTACAGCGTCACCAAACCACTCCACTCATCTTCATTATTTaGTGCATAGTCATACATAGC +
Preference number: 4 (lower is better)
Translates to: DPAEVTGVEWLQRHQTTPLIFII*CIVIHS
Trigger: GCTATGTATGACTATGCAGCAAATAATGAAGATGAG...TGGAGTGGTTTGGTGACGCTGTAACCATTCCACGCCAGTGACCTCTGCTGGGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR GCA 90 bp ACAGCGTCACCAAACCACTCCACGGTGGACACATTCAACCGAGCGGTAACATCTCGTGCAGTTCCTTGTTaGTCTTGGTCTTGTATAATT +
Preference number: 4 (lower is better)
Translates to: TASPNHSTVDTFNRAVTSRAVPC*SWSCII
Trigger: AATTATACAAGACCAAGAGCAACAAGGAACTGCACG...AGATGTTACCGCTCGGTTGAATGTGTCCACCGTGGAGTGGTTTGGTGACGCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR GCA 90 bp AAGTTTCTGTTTTTATTCAGTGCACGAGTAGACGCTATTTCAGTATCAGGCCGCTCGGTGTCGATGTACTaGTCAGACGCCGCCTTGATC +
Preference number: 4 (lower is better)
Translates to: KFLFLFSARVDAISVSGRSVSMY*SDAALI
Trigger: GATCAAGGCGGCGTCTGAGCAGTACATCGACACCGA...GCGGCCTGATACTGAAATAGCGTCTACTCGTGCACTGAATAAAAACAGAAACTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CCA 90 bp GTGACCTCATCTGGGGGAAAGAGCTCATTAGAGACTTTCAATCTCAAGCATTATTGCTCCATCAAGGCTTaGCGTCGCTTTTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: VTSSGGKSSLETFNLKHYCSIKA*RRFSSS
Trigger: GGAGCTGGAAAAGCGACGCCAAGCCTTGATGGAGCA...ATAATGCTTGAGATTGAAAGTCTCTAATGAGCTCTTTCCCCCAGATGAGGTCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS-3UTR CCA 90 bp GTACTATGGGGTTTGGTTTCTTTATGGGAAAGGTGTTTGCATAGATTGCTAGCTTGTGGGCTGTCCCGCTaGTGCTGTCCTTTAGAACCC +
Preference number: 4 (lower is better)
Translates to: VLWGLVSLWERCLHRLLACGLSR*CCPLEP
Trigger: GGGTTCTAAAGGACAGCACCAGCGGGACAGCCCACA...AGCTAGCAATCTATGCAAACACCTTTCCCATAAAGAAACCAAACCCCATAGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000427234.5
ENST00000622089.4
CDS-3UTR CCA 90 bp TATGGGTTGCTCTTTCCATTTGGTTTGCAGGCTTTTAATTCTGTAGCTTCAATGAGGGGTGAAGCTGCATaGTGCTCCCTCAGCCCCAAG +
Preference number: 4 (lower is better)
Translates to: YGLLFPFGLQAFNSVASMRGEAA*CSLSPK
Trigger: CTTGGGGCTGAGGGAGCACCATGCAGCTTCACCCCT...CATTGAAGCTACAGAATTAAAAGCCTGCAAACCAAATGGAAAGAGCAACCCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000427234.5
CDS-3UTR TCA 90 bp AAGTTTCTGTTTTTATTCAGTGCACGAGTAGACGCTATTTCAGTATCAGGCCGCGGAATGGGTAAAGGCTaGATGAGACTGGCGGTTCCA +
Preference number: 4 (lower is better)
Translates to: KFLFLFSARVDAISVSGRGMGKG*MRLAVP
Trigger: TGGAACCGCCAGTCTCATTCAGCCTTTACCCATTCC...GCGGCCTGATACTGAAATAGCGTCTACTCGTGCACTGAATAAAAACAGAAACTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR TCA 90 bp ACAGCGTCACCAAACCACTCCACGGTGGACACATTCAACCGAGCGGTAACATCTGCTTCCAACTCAAGATaGAGATTCTTCTTTTTAGAG +
Preference number: 4 (lower is better)
Translates to: TASPNHSTVDTFNRAVTSASNSR*RFFFLE
Trigger: CTCTAAAAAGAAGAATCTTCATCTTGAGTTGGAAGC...AGATGTTACCGCTCGGTTGAATGTGTCCACCGTGGAGTGGTTTGGTGACGCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR TCA 90 bp AGAGACTTTCAATCTCAAGCATTATCCGGCAGGCAGAGACAGCATTTGGAGGATAGAGGAAGAGGTTGTTaGGACAGCTTAGCAGAGACA +
Preference number: 4 (lower is better)
Translates to: RDFQSQALSGRQRQHLEDRGRGC*DSLAET
Trigger: TGTCTCTGCTAAGCTGTCTCAACAACCTCTTCCTCT...ATCCTCCAAATGCTGTCTCTGCCTGCCGGATAATGCTTGAGATTGAAAGTCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS-3UTR TCA 90 bp TCCACGGTGGACACATTCAACCGAGCGGTAACATCTGGTGGTCTGATGCCTCATTTATACATTTTGAATTaGGCATTGGACTTCGAGCTG +
Preference number: 4 (lower is better)
Translates to: STVDTFNRAVTSGGLMPHLYILN*ALDFEL
Trigger: CAGCTCGAAGTCCAATGCTCAATTCAAAATGTATAA...ATGAGGCATCAGACCACCAGATGTTACCGCTCGGTTGAATGTGTCCACCGTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR TCA 90 bp ACTGGCGTGGAATGGTTACAGCGTCACCAAACCACTCCACGGTGGACACATTCAGCGTTTTATACATTTTaGATTGAGCATTGGACTTCG +
Preference number: 4 (lower is better)
Translates to: TGVEWLQRHQTTPRWTHSAFYTF*IEHWTS
Trigger: CGAAGTCCAATGCTCAATTCAAAATGTATAAAACGC...TGAATGTGTCCACCGTGGAGTGGTTTGGTGACGCTGTAACCATTCCACGCCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR TCA 90 bp GATCAAGTTTCTGTTTTTATTCAGTGCACGAGTAGACGCTATTTCAGTATCAGGGCGTGCATGGCTTTGTaGGGGGTGAAGCTGCATGGT +
Preference number: 4 (lower is better)
Translates to: DQVSVFIQCTSRRYFSIRACMAL*GVKLHG
Trigger: ACCATGCAGCTTCACCCCTCACAAAGCCATGCACGC...CCTGATACTGAAATAGCGTCTACTCGTGCACTGAATAAAAACAGAAACTTGATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR TCA 90 bp ACTCAAGCACAAATCATTTTAAAGTGCTACTCGAATAAGGATAGCTGTCATCAGATCCCCGTCCTTCCTTaGTGGGGCTCCTGCCACATC +
Preference number: 4 (lower is better)
Translates to: TQAQIILKCYSNKDSCHQIPVLP*WGSCHI
Trigger: GATGTGGCAGGAGCCCCATCAAGGAAGGACGGGGAT...CTGATGACAGCTATCCTTATTCGAGTAGCACTTTAAAATGATTTGTGCTTGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS-3UTR GCA 90 bp GATATTAGGCAAATATCCAAGGAAGCTACGGTCTGCCATAGGCCCTTCCCATCCAGATCTGCTGATGTTTaGCATTCAGTGCTTCCAACT +
Preference number: 4 (lower is better)
Translates to: DIRQISKEATVCHRPFPSRSADV*HSVLPT
Trigger: AGTTGGAAGCACTGAATGGCAAACATCAGCAGATCT...GGATGGGAAGGGCCTATGGCAGACCGTAGCTTCCTTGGATATTTGCCTAATATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS-3UTR GCA 90 bp GATATTAGGCAAATATCCAAGGAAGCTACGGTCTGCCATAGGCCCTTCCCATCCATTTCCAAGTCACACTaGTTATCCAGAACTTCCAGC +
Preference number: 4 (lower is better)
Translates to: DIRQISKEATVCHRPFPSISKSH*LSRTSS
Trigger: GCTGGAAGTTCTGGATAAGCAGTGTGACTTGGAAAT...GGATGGGAAGGGCCTATGGCAGACCGTAGCTTCCTTGGATATTTGCCTAATATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS-3UTR GCA 90 bp ACAGCGTCACCAAACCACTCCACGGTGGACACATTCAACCGAGCGGTAACATCTCACCAATTTTCTTGCTaGTCCAAGACAGTAATAATG +
Preference number: 4 (lower is better)
Translates to: TASPNHSTVDTFNRAVTSHQFSC*SKTVIM
Trigger: CATTATTACTGTCTTGGAGCAGCAAGAAAATTGGTG...AGATGTTACCGCTCGGTTGAATGTGTCCACCGTGGAGTGGTTTGGTGACGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR GCA 90 bp CTCTTTCCATTTGGTTTGCAGGCTTTTAATTCTGTAGCTTCAATGACATGCACCTCGGTGTCGATGTACTaGTCAGACGCCGCCTTGATC +
Preference number: 4 (lower is better)
Translates to: LFPFGLQAFNSVASMTCTSVSMY*SDAALI
Trigger: GATCAAGGCGGCGTCTGAGCAGTACATCGACACCGA...GGTGCATGTCATTGAAGCTACAGAATTAAAAGCCTGCAAACCAAATGGAAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427234.5
ENST00000449392.1
CDS-3UTR GCA 90 bp ACAGCGTCACCAAACCACTCCACGGTGGACACATTCAACCGAGCGGTAACATCTTCTGTTTTTATTCAGTaGACGAGTAGACGCTATTTC +
Preference number: 4 (lower is better)
Translates to: TASPNHSTVDTFNRAVTSSVFIQ*TSRRYF
Trigger: GAAATAGCGTCTACTCGTGCACTGAATAAAAACAGA...AGATGTTACCGCTCGGTTGAATGTGTCCACCGTGGAGTGGTTTGGTGACGCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR GCA 90 bp AAGTGCTACTCGAATAAGGATAGCTGTCATCAGCGTAGAGGTCACTGGTATAAAACGAAGCCATGCGAATaGCCTCTTGTTCTCCCGCTT +
Preference number: 4 (lower is better)
Translates to: KCYSNKDSCHQRRGHWYKTKPCE*PLVLPL
Trigger: AAGCGGGAGAACAAGAGGGCATTCGCATGGCTTCGT...TTTATACCAGTGACCTCTACGCTGATGACAGCTATCCTTATTCGAGTAGCACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS-3UTR CCA 90 bp GTACTATGGGGTTTGGTTTCTTTATGGGAAAGGTGTTTGCATAGATTGCTAGCTAGACAGGCTCATCGCTaGAAGGGTCTGTGGGCAGTT +
Preference number: 4 (lower is better)
Translates to: VLWGLVSLWERCLHRLLARQAHR*KGLWAV
Trigger: AACTGCCCACAGACCCTTCCAGCGATGAGCCTGTCT...AGCTAGCAATCTATGCAAACACCTTTCCCATAAAGAAACCAAACCCCATAGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CCA 90 bp GATCAAGTTTCTGTTTTTATTCAGTGCACGAGTAGACGCTATTTCAGTATCAGGTGTGGGCTGTCCCGCTaGTGCTGTCCTTTAGAACCC +
Preference number: 4 (lower is better)
Translates to: DQVSVFIQCTSRRYFSIRCGLSR*CCPLEP
Trigger: GGGTTCTAAAGGACAGCACCAGCGGGACAGCCCACA...CCTGATACTGAAATAGCGTCTACTCGTGCACTGAATAAAAACAGAAACTTGATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CCA 90 bp ACTGGCGTGGAATGGTTACAGCGTCACCAAACCACTCCACGGTGGACACATTCAGGTTTGGTTTCTTTATaGGAAAGGTGTTTGCATAGA +
Preference number: 4 (lower is better)
Translates to: TGVEWLQRHQTTPRWTHSGLVSL*ERCLHR
Trigger: TCTATGCAAACACCTTTCCCATAAAGAAACCAAACC...TGAATGTGTCCACCGTGGAGTGGTTTGGTGACGCTGTAACCATTCCACGCCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CCA 90 bp TCAATCTCAAGCATTATCCGGCAGGCAGAGACAGCATTTGGAGGATGTGAGAGCCAGCGTAGAGGTCACTaGTATAAACAAACAGTAGCT +
Preference number: 4 (lower is better)
Translates to: SISSIIRQAETAFGGCESQRRGH*YKQTVA
Trigger: AGCTACTGTTTGTTTATACCAGTGACCTCTACGCTG...GCTCTCACATCCTCCAAATGCTGTCTCTGCCTGCCGGATAATGCTTGAGATTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406921.7
3UTR CAA 72 bp CAATCTCAAGCATTATCCGGCAGGCAGAGACAGCATTaGGAGGATGTGAGAGCTTCCGTCACTATTTGTGAA +
Preference number: 4 (lower is better)
Translates to: QSQALSGRQRQH*EDVRASVTICE
Trigger: TTCACAAATAGTGACGGAAGCTCTCACATCCTCCAAATGCTGTCTCTGCCTGCCGGATAATGCTTGAGATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS-3UTR TCA 90 bp ACAAACAGAGCTGAACATGTGAACACTAGGACAAGGCACTGTACTATGGGGTTTATGGAGAACTCTTGCTaGTCCATCTTCCCATCCTTG +
Preference number: 4 (lower is better)
Translates to: TNRAEHVNTRTRHCTMGFMENSC*SIFPSL
Trigger: CAAGGATGGGAAGATGGATCAGCAAGAGTTCTCCAT...AAACCCCATAGTACAGTGCCTTGTCCTAGTGTTCACATGTTCAGCTCTGTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR TCA 90 bp GTACTATGGGGTTTGGTTTCTTTATGGGAAAGGTGTTTGCATAGATTGCTAGCTGGAATGGGTAAAGGCTaGATGAGACTGGCGGTTCCA +
Preference number: 4 (lower is better)
Translates to: VLWGLVSLWERCLHRLLAGMGKG*MRLAVP
Trigger: TGGAACCGCCAGTCTCATTCAGCCTTTACCCATTCC...AGCTAGCAATCTATGCAAACACCTTTCCCATAAAGAAACCAAACCCCATAGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR TCA 90 bp TTAAAGTGCTACTCGAATAAGGATAGCTGTCATCAGCGTAGAGGTCACTGGTATATCCTGAAGTCTGCCTaGGATCTGCTGATGTTTGCC +
Preference number: 4 (lower is better)
Translates to: LKCYSNKDSCHQRRGHWYILKSA*DLLMFA
Trigger: GGCAAACATCAGCAGATCTCAGGCAGACTTCAGGAT...ATACCAGTGACCTCTACGCTGATGACAGCTATCCTTATTCGAGTAGCACTTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS-3UTR TCA 90 bp AGAGACTTTCAATCTCAAGCATTATCCGGCAGGCAGAGACAGCATTTGGAGGATCCCAAAAGTTTAACATaGCTGGCAGGAAACCATCCT +
Preference number: 4 (lower is better)
Translates to: RDFQSQALSGRQRQHLEDPKSLT*LAGNHP
Trigger: AGGATGGTTTCCTGCCAGTCATGTTAAACTTTTGGG...ATCCTCCAAATGCTGTCTCTGCCTGCCGGATAATGCTTGAGATTGAAAGTCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS-3UTR TCA 90 bp ATCAAGTTTCTGTTTTTATTCAGTGCACGAGTAGACGCTATTTCAGTATCAGGCACTCCCTCATTCACTTaGGAGCACAGCTCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: IKFLFLFSARVDAISVSGTPSFT*EHSSSA
Trigger: GGCAGAGGAGCTGTGCTCTCAAGTGAATGAGGGAGT...GCCTGATACTGAAATAGCGTCTACTCGTGCACTGAATAAAAACAGAAACTTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR TCA 90 bp TCACAGTATGGGTTGCTCTTTCCATTTGGTTTGCAGGCTTTTAATTCTGTAGCTTCTGGGAGCCCATGCTaGTTTCACAGTATGGGTTGC +
Preference number: 4 (lower is better)
Translates to: SQYGLLFPFGLQAFNSVASGSPC*FHSMGC
Trigger: GCAACCCATACTGTGAAATCAGCATGGGCTCCCAGA...AGCTACAGAATTAAAAGCCTGCAAACCAAATGGAAAGAGCAACCCATACTGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427234.5
ENST00000449392.1
CDS-3UTR GCA 90 bp GATCAAGTTTCTGTTTTTATTCAGTGCACGAGTAGACGCTATTTCAGTATCAGGGCCTCCCTTTGTTGCTaGTCCATCAAGGCTTGGCGT +
Preference number: 4 (lower is better)
Translates to: DQVSVFIQCTSRRYFSIRASLCC*SIKAWR
Trigger: ACGCCAAGCCTTGATGGAGCAGCAACAAAGGGAGGC...CCTGATACTGAAATAGCGTCTACTCGTGCACTGAATAAAAACAGAAACTTGATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR GCA 90 bp GTACTATGGGGTTTGGTTTCTTTATGGGAAAGGTGTTTGCATAGATTGCTAGCTCTGGGCTTTACGTTCTaGCTCCCTTTGTTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: VLWGLVSLWERCLHRLLALGFTF*LPLLLL
Trigger: GAGCAGCAACAAAGGGAGGCAGAACGTAAAGCCCAG...AGCTAGCAATCTATGCAAACACCTTTCCCATAAAGAAACCAAACCCCATAGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR GCA 90 bp GATGCCTCATTTCCAAGTAATACTTTTTATAGCCCTGAAAATGGAAACCTTGGCTCGGTGTCGATGTACTaGTCAGACGCCGCCTTGATC +
Preference number: 4 (lower is better)
Translates to: DASFPSNTFYSPENGNLGSVSMY*SDAALI
Trigger: GATCAAGGCGGCGTCTGAGCAGTACATCGACACCGA...GCCAAGGTTTCCATTTTCAGGGCTATAAAAAGTATTACTTGGAAATGAGGCATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000427234.5
ENST00000622089.4
CDS-3UTR GCA 90 bp TTTCCATTTGGTTTGCAGGCTTTTAATTCTGTAGCTTCAATGACATGCACCATCCCATCAGGCGCCCAATaGCTGAAGTCTTTTGGGAGC +
Preference number: 4 (lower is better)
Translates to: FPFGLQAFNSVASMTCTIPSGAQ*LKSFGS
Trigger: GCTCCCAAAAGACTTCAGGCATTGGGCGCCTGATGG...GATGGTGCATGTCATTGAAGCTACAGAATTAAAAGCCTGCAAACCAAATGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427234.5
ENST00000449392.1
CDS-3UTR GCA 90 bp ACAAACAGAGCTGAACATGTGAACACTAGGACAAGGCACTGTACTATGGGGTTTGCTAGCTATTTAGTGTaGAGGAAAACAGAGCCCCCA +
Preference number: 4 (lower is better)
Translates to: TNRAEHVNTRTRHCTMGFASYLV*RKTEPP
Trigger: TGGGGGCTCTGTTTTCCTGCACACTAAATAGCTAGC...AAACCCCATAGTACAGTGCCTTGTCCTAGTGTTCACATGTTCAGCTCTGTTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000427234.5
ENST00000622089.4
CDS-3UTR GCA 90 bp AAGTGCTACTCGAATAAGGATAGCTGTCATCAGCGTAGAGGTCACTGGTATAAACATCCAACGAAGCCATaGGAATGCCCTCTTGTTCTC +
Preference number: 4 (lower is better)
Translates to: KCYSNKDSCHQRRGHWYKHPTKP*ECPLVL
Trigger: GAGAACAAGAGGGCATTCGCATGGCTTCGTTGGATG...TTTATACCAGTGACCTCTACGCTGATGACAGCTATCCTTATTCGAGTAGCACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS-3UTR CCA 90 bp AAGTTTCTGTTTTTATTCAGTGCACGAGTAGACGCTATTTCAGTATCAGGCCGCTGCAGCTGGAGGCAATaGCTGAGGAATGGACAGATT +
Preference number: 4 (lower is better)
Translates to: KFLFLFSARVDAISVSGRCSWRQ*LRNGQI
Trigger: AATCTGTCCATTCCTCAGCCATTGCCTCCAGCTGCA...GCGGCCTGATACTGAAATAGCGTCTACTCGTGCACTGAATAAAAACAGAAACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CCA 90 bp AAGTTTCTGTTTTTATTCAGTGCACGAGTAGACGCTATTTCAGTATCAGGCCGCTTAAGGGAGGAAGGTTaGTCCCTGAAGTCGCAGAAG +
Preference number: 4 (lower is better)
Translates to: KFLFLFSARVDAISVSGRLREEG*SLKSQK
Trigger: CTTCTGCGACTTCAGGGACCAACCTTCCTCCCTTAA...GCGGCCTGATACTGAAATAGCGTCTACTCGTGCACTGAATAAAAACAGAAACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CCA 90 bp AAGTTTCTGTTTTTATTCAGTGCACGAGTAGACGCTATTTCAGTATCAGGCCGCGTTTCAGCAGGAAGCTaGAGAGGGGCATTCCTTTAC +
Preference number: 4 (lower is better)
Translates to: KFLFLFSARVDAISVSGRVSAGS*RGAFLY
Trigger: GTAAAGGAATGCCCCTCTCCAGCTTCCTGCTGAAAC...GCGGCCTGATACTGAAATAGCGTCTACTCGTGCACTGAATAAAAACAGAAACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CCA 90 bp GTACTATGGGGTTTGGTTTCTTTATGGGAAAGGTGTTTGCATAGATTGCTAGCTACTTCTGATGAGCAGTaGGTAGCGGGTGATCCTCTG +
Preference number: 4 (lower is better)
Translates to: VLWGLVSLWERCLHRLLATSDEQ*VAGDPL
Trigger: CAGAGGATCACCCGCTACCCACTGCTCATCAGAAGT...AGCTAGCAATCTATGCAAACACCTTTCCCATAAAGAAACCAAACCCCATAGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CCA 90 bp GATGCCTCATTTCCAAGTAATACTTTTTATAGCCCTGAAAATGGAAACCTTGGCAGACAGGCTCATCGCTaGAAGGGTCTGTGGGCAGTT +
Preference number: 4 (lower is better)
Translates to: DASFPSNTFYSPENGNLGRQAHR*KGLWAV
Trigger: AACTGCCCACAGACCCTTCCAGCGATGAGCCTGTCT...GCCAAGGTTTCCATTTTCAGGGCTATAAAAAGTATTACTTGGAAATGAGGCATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CCA 90 bp ACAAACAGAGCTGAACATGTGAACACTAGGACAAGGCACTGTACTATGGGGTTTAGCGGTAACATCTGGTaGTCTGATGCCTCATTTCCA +
Preference number: 4 (lower is better)
Translates to: TNRAEHVNTRTRHCTMGFSGNIW*SDASFP
Trigger: TGGAAATGAGGCATCAGACCACCAGATGTTACCGCT...AAACCCCATAGTACAGTGCCTTGTCCTAGTGTTCACATGTTCAGCTCTGTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000427234.5
ENST00000622089.4
CDS-3UTR TCA 90 bp GTACTATGGGGTTTGGTTTCTTTATGGGAAAGGTGTTTGCATAGATTGCTAGCTGAGCCATCATGGTCCTaGGTTTTCCTTGCTAGCTCT +
Preference number: 4 (lower is better)
Translates to: VLWGLVSLWERCLHRLLAEPSWS*VFLASS
Trigger: AGAGCTAGCAAGGAAAACTCAGGACCATGATGGCTC...AGCTAGCAATCTATGCAAACACCTTTCCCATAAAGAAACCAAACCCCATAGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355123.9
ENST00000361999.7
CDS-3UTR TCA 90 bp TTAAAGTGCTACTCGAATAAGGATAGCTGTCATCAGCGTAGAGGTCACTGGTATATGGAGAACTCTTGCTaGTCCATCTTCCCATCCTTG +
Preference number: 4 (lower is better)
Translates to: LKCYSNKDSCHQRRGHWYMENSC*SIFPSL
Trigger: CAAGGATGGGAAGATGGATCAGCAAGAGTTCTCCAT...ATACCAGTGACCTCTACGCTGATGACAGCTATCCTTATTCGAGTAGCACTTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS-3UTR TCA 90 bp AAGTGCTACTCGAATAAGGATAGCTGTCATCAGCGTAGAGGTCACTGGTATAAAAGTCGCAGAAGACAATaGTGTTATAGGTGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: KCYSNKDSCHQRRGHWYKSRRRQ*CYRCSW
Trigger: CCAGCTGCACCTATAACATCATTGTCTTCTGCGACT...TTTATACCAGTGACCTCTACGCTGATGACAGCTATCCTTATTCGAGTAGCACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS-3UTR TCA 90 bp AAGTTTCTGTTTTTATTCAGTGCACGAGTAGACGCTATTTCAGTATCAGGCCGCATATTCTTCTCCAACTaGATAGGCTGCCGAGGTAGG +
Preference number: 4 (lower is better)
Translates to: KFLFLFSARVDAISVSGRIFFSN*IGCRGR
Trigger: CCTACCTCGGCAGCCTATTCAGTTGGAGAAGAATAT...GCGGCCTGATACTGAAATAGCGTCTACTCGTGCACTGAATAAAAACAGAAACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR TCA 90 bp ACAAACAGAGCTGAACATGTGAACACTAGGACAAGGCACTGTACTATGGGGTTTCCCAAAAGTTTAACATaGCTGGCAGGAAACCATCCT +
Preference number: 4 (lower is better)
Translates to: TNRAEHVNTRTRHCTMGFPKSLT*LAGNHP
Trigger: AGGATGGTTTCCTGCCAGTCATGTTAAACTTTTGGG...AAACCCCATAGTACAGTGCCTTGTCCTAGTGTTCACATGTTCAGCTCTGTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR TCA 90 bp GATGCCTCATTTCCAAGTAATACTTTTTATAGCCCTGAAAATGGAAACCTTGGCTCTGCCATGCGTTTCTaGAAAACCTCGACGACGAGC +
Preference number: 4 (lower is better)
Translates to: DASFPSNTFYSPENGNLGSAMRF*KTSTTS
Trigger: GCTCGTCGTCGAGGTTTTTCAGAAACGCATGGCAGA...GCCAAGGTTTCCATTTTCAGGGCTATAAAAAGTATTACTTGGAAATGAGGCATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR TCA 90 bp AGTCGGCGGGTCATAGGGCCTTTGCTTTCCTGTTCTGTTCGAATTTTTGCCACTTTATACATTTTGAATTaGGCATTGGACTTCGAGCTG +
Preference number: 4 (lower is better)
Translates to: SRRVIGPLLSCSVRIFATLYILN*ALDFEL
Trigger: CAGCTCGAAGTCCAATGCTCAATTCAAAATGTATAA...AGTGGCAAAAATTCGAACAGAACAGGAAAGCAAAGGCCCTATGACCCGCCGACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427234.5
CDS-3UTR TCA 90 bp GATGCCTCATTTCCAAGTAATACTTTTTATAGCCCTGAAAATGGAAACCTTGGCTCTGGGAGCCCATGCTaGTTTCACAGTATGGGTTGC +
Preference number: 4 (lower is better)
Translates to: DASFPSNTFYSPENGNLGSGSPC*FHSMGC
Trigger: GCAACCCATACTGTGAAATCAGCATGGGCTCCCAGA...GCCAAGGTTTCCATTTTCAGGGCTATAAAAAGTATTACTTGGAAATGAGGCATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000427234.5
ENST00000622089.4
CDS-3UTR GCA 90 bp ATCAAGTTTCTGTTTTTATTCAGTGCACGAGTAGACGCTATTTCAGTATCAGGCTCTGCCTCCCTTTGTTaGTGCTCCATCAAGGCTTGG +
Preference number: 4 (lower is better)
Translates to: IKFLFLFSARVDAISVSGSASLC*CSIKAW
Trigger: CCAAGCCTTGATGGAGCAGCAACAAAGGGAGGCAGA...GCCTGATACTGAAATAGCGTCTACTCGTGCACTGAATAAAAACAGAAACTTGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR GCA 90 bp GATATTAGGCAAATATCCAAGGAAGCTACGGTCTGCCATAGGCCCTTCCCATCCAACCACCAATTTTCTTaGTGCTCCAAGACAGTAATA +
Preference number: 4 (lower is better)
Translates to: DIRQISKEATVCHRPFPSNHQFS*CSKTVI
Trigger: TATTACTGTCTTGGAGCAGCAAGAAAATTGGTGGTT...GGATGGGAAGGGCCTATGGCAGACCGTAGCTTCCTTGGATATTTGCCTAATATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS-3UTR GCA 90 bp AAGTGCTACTCGAATAAGGATAGCTGTCATCAGCGTAGAGGTCACTGGTATAAACCGTTGATCTCTCCTTaGCACCAATCAGGATCATCT +
Preference number: 4 (lower is better)
Translates to: KCYSNKDSCHQRRGHWYKPLISP*HQSGSS
Trigger: AGATGATCCTGATTGGTGGCAAGGAGAGATCAACGG...TTTATACCAGTGACCTCTACGCTGATGACAGCTATCCTTATTCGAGTAGCACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS-3UTR GCA 90 bp ATGATCAAGTTTCTGTTTTTATTCAGTGCACGAGTAGACGCTATTTCAGTATCAGGTGAAGCTGCATGGTaGTCCCTCAGCCCCAAGAGA +
Preference number: 4 (lower is better)
Translates to: MIKFLFLFSARVDAISVSGEAAW*SLSPKR
Trigger: TCTCTTGGGGCTGAGGGAGCACCATGCAGCTTCACC...TGATACTGAAATAGCGTCTACTCGTGCACTGAATAAAAACAGAAACTTGATCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CCA 90 bp ATCAAGTTTCTGTTTTTATTCAGTGCACGAGTAGACGCTATTTCAGTATCAGGCACTTCTGATGAGCAGTaGGTAGCGGGTGATCCTCTG +
Preference number: 4 (lower is better)
Translates to: IKFLFLFSARVDAISVSGTSDEQ*VAGDPL
Trigger: CAGAGGATCACCCGCTACCCACTGCTCATCAGAAGT...GCCTGATACTGAAATAGCGTCTACTCGTGCACTGAATAAAAACAGAAACTTGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CCA 90 bp CTCTTTCTGTACATATGGGCAATGATAAAGCTTAAAGATGCATGTCCTAAGAAATGTGGGCTGTCCCGCTaGTGCTGTCCTTTAGAACCC +
Preference number: 4 (lower is better)
Translates to: LFLYIWAMIKLKDACPKKCGLSR*CCPLEP
Trigger: GGGTTCTAAAGGACAGCACCAGCGGGACAGCCCACA...TTTCTTAGGACATGCATCTTTAAGCTTTATCATTGCCCATATGTACAGAAAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CCA 90 bp GATCAAGTTTCTGTTTTTATTCAGTGCACGAGTAGACGCTATTTCAGTATCAGGGTCACTGGCGTGGAATaGTTACAGCGTCACCAAACC +
Preference number: 4 (lower is better)
Translates to: DQVSVFIQCTSRRYFSIRVTGVE*LQRHQT
Trigger: GGTTTGGTGACGCTGTAACCATTCCACGCCAGTGAC...CCTGATACTGAAATAGCGTCTACTCGTGCACTGAATAAAAACAGAAACTTGATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CCA 90 bp GATGCCTCATTTCCAAGTAATACTTTTTATAGCCCTGAAAATGGAAACCTTGGCGTCACTGGCGTGGAATaGTTACAGCGTCACCAAACC +
Preference number: 4 (lower is better)
Translates to: DASFPSNTFYSPENGNLGVTGVE*LQRHQT
Trigger: GGTTTGGTGACGCTGTAACCATTCCACGCCAGTGAC...GCCAAGGTTTCCATTTTCAGGGCTATAAAAAGTATTACTTGGAAATGAGGCATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CCA 90 bp CTCTTTCTGTACATATGGGCAATGATAAAGCTTAAAGATGCATGTCCTAAGAAACCCAGCAGAGGTCACTaGCGTGGAATGGTTACAGCG +
Preference number: 4 (lower is better)
Translates to: LFLYIWAMIKLKDACPKKPSRGH*RGMVTA
Trigger: CGCTGTAACCATTCCACGCCAGTGACCTCTGCTGGG...TTTCTTAGGACATGCATCTTTAAGCTTTATCATTGCCCATATGTACAGAAAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CCA 90 bp CCATTTGGTTTGCAGGCTTTTAATTCTGTAGCTTCAATGACATGCACCATCAGGATGCCTGAAGTCTTTTaGGAGCGGGCTTTTAGGAGT +
Preference number: 4 (lower is better)
Translates to: PFGLQAFNSVASMTCTIRMPEVF*ERAFRS
Trigger: ACTCCTAAAAGCCCGCTCCCAAAAGACTTCAGGCAT...CCTGATGGTGCATGTCATTGAAGCTACAGAATTAAAAGCCTGCAAACCAAATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000449392.1
CDS-3UTR TCA 90 bp GATCAAGTTTCTGTTTTTATTCAGTGCACGAGTAGACGCTATTTCAGTATCAGGATAGCTGTGGGAAACTaGGCCATCATGGTCCTGAGT +
Preference number: 4 (lower is better)
Translates to: DQVSVFIQCTSRRYFSIRIAVGN*AIMVLS
Trigger: ACTCAGGACCATGATGGCTCAGTTTCCCACAGCTAT...CCTGATACTGAAATAGCGTCTACTCGTGCACTGAATAAAAACAGAAACTTGATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR TCA 90 bp GTACTATGGGGTTTGGTTTCTTTATGGGAAAGGTGTTTGCATAGATTGCTAGCTAGTCGCAGAAGACAATaGTGTTATAGGTGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: VLWGLVSLWERCLHRLLASRRRQ*CYRCSW
Trigger: CCAGCTGCACCTATAACATCATTGTCTTCTGCGACT...AGCTAGCAATCTATGCAAACACCTTTCCCATAAAGAAACCAAACCCCATAGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR TCA 90 bp ACTCAAGCACAAATCATTTTAAAGTGCTACTCGAATAAGGATAGCTGTCATCAGTTGAGTCGGACATCCTaGAGTCTGCCTGAGATCTGC +
Preference number: 4 (lower is better)
Translates to: TQAQIILKCYSNKDSCHQLSRTS*SLPEIC
Trigger: GCAGATCTCAGGCAGACTTCAGGATGTCCGACTCAA...CTGATGACAGCTATCCTTATTCGAGTAGCACTTTAAAATGATTTGTGCTTGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS-3UTR TCA 90 bp AAGTTTCTGTTTTTATTCAGTGCACGAGTAGACGCTATTTCAGTATCAGGCCGCACTTGTCCCTGTCCATaGATAGGTGATACAGATCCA +
Preference number: 4 (lower is better)
Translates to: KFLFLFSARVDAISVSGRTCPCP*IGDTDP
Trigger: TGGATCTGTATCACCTATTCATGGACAGGGACAAGT...GCGGCCTGATACTGAAATAGCGTCTACTCGTGCACTGAATAAAAACAGAAACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR TCA 90 bp TCACAGTATGGGTTGCTCTTTCCATTTGGTTTGCAGGCTTTTAATTCTGTAGCTGAAGCAGGAAGTCATTaGAGAGGAATCCGTGCAGTT +
Preference number: 4 (lower is better)
Translates to: SQYGLLFPFGLQAFNSVAEAGSH*RGIRAV
Trigger: AACTGCACGGATTCCTCTTCAATGACTTCCTGCTTC...AGCTACAGAATTAAAAGCCTGCAAACCAAATGGAAAGAGCAACCCATACTGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427234.5
CDS-3UTR TCA 90 bp GGGCCTTTGCTTTCCTGTTCTGTTCGAATTTTTGCCACTGGAATTTCAGTACGACAGGAAATCATCTGGTaGAAACTGGTCTCTGTCAAA +
Preference number: 4 (lower is better)
Translates to: GPLLSCSVRIFATGISVRQEIIW*KLVSVK
Trigger: TTTGACAGAGACCAGTTTTCACCAGATGATTTCCTG...TCGTACTGAAATTCCAGTGGCAAAAATTCGAACAGAACAGGAAAGCAAAGGCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427234.5
CDS-3UTR GCA 90 bp AAGTGCTACTCGAATAAGGATAGCTGTCATCAGCGTAGAGGTCACTGGTATAAAGTGGTTATCTTTCTTTaGAGTCCAGGAACAAAGGGC +
Preference number: 4 (lower is better)
Translates to: KCYSNKDSCHQRRGHWYKVVIFL*SPGTKG
Trigger: GCCCTTTGTTCCTGGACTGCAAAGAAAGATAACCAC...TTTATACCAGTGACCTCTACGCTGATGACAGCTATCCTTATTCGAGTAGCACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS-3UTR GCA 90 bp TTGCTCTTTCCATTTGGTTTGCAGGCTTTTAATTCTGTAGCTTCAATGACATGCGTAGCTTCAATGACATaGACCATCAGGCGCCCAATG +
Preference number: 4 (lower is better)
Translates to: LLFPFGLQAFNSVASMTCVASMT*TIRRPM
Trigger: CATTGGGCGCCTGATGGTGCATGTCATTGAAGCTAC...GCATGTCATTGAAGCTACAGAATTAAAAGCCTGCAAACCAAATGGAAAGAGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427234.5
ENST00000449392.1
CDS-3UTR CCA 90 bp GTACTATGGGGTTTGGTTTCTTTATGGGAAAGGTGTTTGCATAGATTGCTAGCTGAGGAATGGACAGATTaGGCATGCTTCCCATTCCAA +
Preference number: 4 (lower is better)
Translates to: VLWGLVSLWERCLHRLLAEEWTD*ACFPFQ
Trigger: TTGGAATGGGAAGCATGCCCAATCTGTCCATTCCTC...AGCTAGCAATCTATGCAAACACCTTTCCCATAAAGAAACCAAACCCCATAGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CCA 90 bp GATCAAGTTTCTGTTTTTATTCAGTGCACGAGTAGACGCTATTTCAGTATCAGGGCAATGGCTGAGGAATaGACAGATTGGGCATGCTTC +
Preference number: 4 (lower is better)
Translates to: DQVSVFIQCTSRRYFSIRAMAEE*TDWACF
Trigger: GAAGCATGCCCAATCTGTCCATTCCTCAGCCATTGC...CCTGATACTGAAATAGCGTCTACTCGTGCACTGAATAAAAACAGAAACTTGATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CCA 90 bp CAAGCACAAATCATTTTAAAGTGCTACTCGAATAAGGATAGCTGTCATCAGCGTTTAAGGGAGGAAGGTTaGTCCCTGAAGTCGCAGAAG +
Preference number: 4 (lower is better)
Translates to: QAQIILKCYSNKDSCHQRLREEG*SLKSQK
Trigger: CTTCTGCGACTTCAGGGACCAACCTTCCTCCCTTAA...ACGCTGATGACAGCTATCCTTATTCGAGTAGCACTTTAAAATGATTTGTGCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS-3UTR CCA 90 bp ATGATCAAGTTTCTGTTTTTATTCAGTGCACGAGTAGACGCTATTTCAGTATCACTGAGGTCCCAGTCTTaGGTGAGTTCCCTGAGAGTG +
Preference number: 4 (lower is better)
Translates to: MIKFLFLFSARVDAISVSLRSQS*VSSLRV
Trigger: CACTCTCAGGGAACTCACCCAAGACTGGGACCTCAG...TGATACTGAAATAGCGTCTACTCGTGCACTGAATAAAAACAGAAACTTGATCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CCA 90 bp ATCAAGTTTCTGTTTTTATTCAGTGCACGAGTAGACGCTATTTCAGTATCAGGCGTTTCAGCAGGAAGCTaGAGAGGGGCATTCCTTTAC +
Preference number: 4 (lower is better)
Translates to: IKFLFLFSARVDAISVSGVSAGS*RGAFLY
Trigger: GTAAAGGAATGCCCCTCTCCAGCTTCCTGCTGAAAC...GCCTGATACTGAAATAGCGTCTACTCGTGCACTGAATAAAAACAGAAACTTGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CCA 90 bp GATGCCTCATTTCCAAGTAATACTTTTTATAGCCCTGAAAATGGAAACCTTGGCCCGAGCGGTAACATCTaGTGGTCTGATGCCTCATTT +
Preference number: 4 (lower is better)
Translates to: DASFPSNTFYSPENGNLGPSGNI*WSDASF
Trigger: AAATGAGGCATCAGACCACCAGATGTTACCGCTCGG...GCCAAGGTTTCCATTTTCAGGGCTATAAAAAGTATTACTTGGAAATGAGGCATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000427234.5
ENST00000622089.4
CDS-3UTR CCA 90 bp GATCAAGTTTCTGTTTTTATTCAGTGCACGAGTAGACGCTATTTCAGTATCAGGCCGAGCGGTAACATCTaGTGGTCTGATGCCTCATTT +
Preference number: 4 (lower is better)
Translates to: DQVSVFIQCTSRRYFSIRPSGNI*WSDASF
Trigger: AAATGAGGCATCAGACCACCAGATGTTACCGCTCGG...CCTGATACTGAAATAGCGTCTACTCGTGCACTGAATAAAAACAGAAACTTGATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR TCA 90 bp GATGCCTCATTTCCAAGTAATACTTTTTATAGCCCTGAAAATGGAAACCTTGGCATGGAGAACTCTTGCTaGTCCATCTTCCCATCCTTG +
Preference number: 4 (lower is better)
Translates to: DASFPSNTFYSPENGNLGMENSC*SIFPSL
Trigger: CAAGGATGGGAAGATGGATCAGCAAGAGTTCTCCAT...GCCAAGGTTTCCATTTTCAGGGCTATAAAAAGTATTACTTGGAAATGAGGCATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR TCA 90 bp ATCAAGTTTCTGTTTTTATTCAGTGCACGAGTAGACGCTATTTCAGTATCAGGCAGTCGCAGAAGACAATaGTGTTATAGGTGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: IKFLFLFSARVDAISVSGSRRRQ*CYRCSW
Trigger: CCAGCTGCACCTATAACATCATTGTCTTCTGCGACT...GCCTGATACTGAAATAGCGTCTACTCGTGCACTGAATAAAAACAGAAACTTGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR TCA 90 bp AGAGACTTTCAATCTCAAGCATTATCCGGCAGGCAGAGACAGCATTTGGAGGATAGTTTGAGAAAGATTTaGCTGAAGAAGGGCATTTCT +
Preference number: 4 (lower is better)
Translates to: RDFQSQALSGRQRQHLEDSLRKI*LKKGIS
Trigger: AGAAATGCCCTTCTTCAGTCAAATCTTTCTCAAACT...ATCCTCCAAATGCTGTCTCTGCCTGCCGGATAATGCTTGAGATTGAAAGTCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS-3UTR TCA 90 bp TTAAAGTGCTACTCGAATAAGGATAGCTGTCATCAGCGTAGAGGTCACTGGTATACTGGTAATTTCTTCTaGGGCTCCTCTTCTTGCATT +
Preference number: 4 (lower is better)
Translates to: LKCYSNKDSCHQRRGHWYTGNFF*GSSSCI
Trigger: AATGCAAGAAGAGGAGCCTCAGAAGAAATTACCAGT...ATACCAGTGACCTCTACGCTGATGACAGCTATCCTTATTCGAGTAGCACTTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS-3UTR TCA 90 bp AAGTTTCTGTTTTTATTCAGTGCACGAGTAGACGCTATTTCAGTATCAGGCCGCCATCTTAACGTAGTTTaGAGGAAAGAGACCAGTCAC +
Preference number: 4 (lower is better)
Translates to: KFLFLFSARVDAISVSGRHLNVV*RKETSH
Trigger: GTGACTGGTCTCTTTCCTTCAAACTACGTTAAGATG...GCGGCCTGATACTGAAATAGCGTCTACTCGTGCACTGAATAAAAACAGAAACTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR TCA 90 bp ATGATCAAGTTTCTGTTTTTATTCAGTGCACGAGTAGACGCTATTTCAGTATCATCTGGGAGCCCATGCTaGTTTCACAGTATGGGTTGC +
Preference number: 4 (lower is better)
Translates to: MIKFLFLFSARVDAISVSSGSPC*FHSMGC
Trigger: GCAACCCATACTGTGAAATCAGCATGGGCTCCCAGA...TGATACTGAAATAGCGTCTACTCGTGCACTGAATAAAAACAGAAACTTGATCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR GCA 90 bp GATGCCTCATTTCCAAGTAATACTTTTTATAGCCCTGAAAATGGAAACCTTGGCTGGACAGATTGGGCATaGTTCCCATTCCAAAACGAG +
Preference number: 4 (lower is better)
Translates to: DASFPSNTFYSPENGNLGWTDWA*FPFQNE
Trigger: CTCGTTTTGGAATGGGAAGCATGCCCAATCTGTCCA...GCCAAGGTTTCCATTTTCAGGGCTATAAAAAGTATTACTTGGAAATGAGGCATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR GCA 90 bp TTAAAGTGCTACTCGAATAAGGATAGCTGTCATCAGCGTAGAGGTCACTGGTATCTCTCCAATTCCCGTTaGTTCTCTAAGCGTTTTTCT +
Preference number: 4 (lower is better)
Translates to: LKCYSNKDSCHQRRGHWYLSNSR*FSKRFS
Trigger: AGAAAAACGCTTAGAGAAGCAACGGGAATTGGAGAG...ATACCAGTGACCTCTACGCTGATGACAGCTATCCTTATTCGAGTAGCACTTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS-3UTR GCA 90 bp CAAGCACAAATCATTTTAAAGTGCTACTCGAATAAGGATAGCTGTCATCAGCGTGGACATCCTGAAGTCTaGCTGAGATCTGCTGATGTT +
Preference number: 4 (lower is better)
Translates to: QAQIILKCYSNKDSCHQRGHPEV*LRSADV
Trigger: AACATCAGCAGATCTCAGGCAGACTTCAGGATGTCC...ACGCTGATGACAGCTATCCTTATTCGAGTAGCACTTTAAAATGATTTGTGCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS-3UTR GCA 90 bp AGAGACTTTCAATCTCAAGCATTATCCGGCAGGCAGAGACAGCATTTGGAGGATCACCAATTTTCTTGCTaGTCCAAGACAGTAATAATG +
Preference number: 4 (lower is better)
Translates to: RDFQSQALSGRQRQHLEDHQFSC*SKTVIM
Trigger: CATTATTACTGTCTTGGAGCAGCAAGAAAATTGGTG...ATCCTCCAAATGCTGTCTCTGCCTGCCGGATAATGCTTGAGATTGAAAGTCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS-3UTR GCA 90 bp CAAGCACAAATCATTTTAAAGTGCTACTCGAATAAGGATAGCTGTCATCAGCGTGCCTGTAACTCTCCTTaGCACCACCCACTTGTATTT +
Preference number: 4 (lower is better)
Translates to: QAQIILKCYSNKDSCHQRACNSP*HHPLVF
Trigger: AAATACAAGTGGGTGGTGGCAAGGAGAGTTACAGGC...ACGCTGATGACAGCTATCCTTATTCGAGTAGCACTTTAAAATGATTTGTGCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS-3UTR GCA 90 bp GATCAAGTTTCTGTTTTTATTCAGTGCACGAGTAGACGCTATTTCAGTATCAGGAGCCTGACTCTGCCATaGGTTTCTGAAAAACCTCGA +
Preference number: 4 (lower is better)
Translates to: DQVSVFIQCTSRRYFSIRSLTLP*VSEKPR
Trigger: TCGAGGTTTTTCAGAAACGCATGGCAGAGTCAGGCT...CCTGATACTGAAATAGCGTCTACTCGTGCACTGAATAAAAACAGAAACTTGATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CCA 90 bp TTTCACTGTTTCACAGTTCCTCCAGAGATACCAGTTTATGAAAATGTCAGATGTGCAATGGCTGAGGAATaGACAGATTGGGCATGCTTC +
Preference number: 4 (lower is better)
Translates to: FHCFTVPPEIPVYENVRCAMAEE*TDWACF
Trigger: GAAGCATGCCCAATCTGTCCATTCCTCAGCCATTGC...ACATCTGACATTTTCATAAACTGGTATCTCTGGAGGAACTGTGAAACAGTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS-3UTR CCA 90 bp ACAAACAGAGCTGAACATGTGAACACTAGGACAAGGCACTGTACTATGGGGTTTCACTCTCCATCTTTCTaGGTCACCAATATTTCTTCA +
Preference number: 4 (lower is better)
Translates to: TNRAEHVNTRTRHCTMGFHSPSF*VTNISS
Trigger: TGAAGAAATATTGGTGACCCAGAAAGATGGAGAGTG...AAACCCCATAGTACAGTGCCTTGTCCTAGTGTTCACATGTTCAGCTCTGTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CCA 90 bp GTACTATGGGGTTTGGTTTCTTTATGGGAAAGGTGTTTGCATAGATTGCTAGCTTCTTTTCCTCTCAATTaGCTGCATTGTGTCCAGGGT +
Preference number: 4 (lower is better)
Translates to: VLWGLVSLWERCLHRLLASFPLN*LHCVQG
Trigger: ACCCTGGACACAATGCAGCCAATTGAGAGGAAAAGA...AGCTAGCAATCTATGCAAACACCTTTCCCATAAAGAAACCAAACCCCATAGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CCA 90 bp CCATTTGGTTTGCAGGCTTTTAATTCTGTAGCTTCAATGACATGCACCATCAGGGCTGATTTCACAGTATaGGTTGCTCTTTCCATTTGG +
Preference number: 4 (lower is better)
Translates to: PFGLQAFNSVASMTCTIRADFTV*VALSIW
Trigger: CCAAATGGAAAGAGCAACCCATACTGTGAAATCAGC...CCTGATGGTGCATGTCATTGAAGCTACAGAATTAAAAGCCTGCAAACCAAATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427234.5
ENST00000449392.1
CDS-3UTR CCA 90 bp AAGTTTCTGTTTTTATTCAGTGCACGAGTAGACGCTATTTCAGTATCAGGCCGCTCGAATTTTTGCCACTaGAATTTCAGTACGACCCAG +
Preference number: 4 (lower is better)
Translates to: KFLFLFSARVDAISVSGRSNFCH*NFSTTQ
Trigger: CTGGGTCGTACTGAAATTCCAGTGGCAAAAATTCGA...GCGGCCTGATACTGAAATAGCGTCTACTCGTGCACTGAATAAAAACAGAAACTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR TCA 90 bp ACAAACAGAGCTGAACATGTGAACACTAGGACAAGGCACTGTACTATGGGGTTTTGTTATGTAACCTCCTaGAGGTTTGAGGTTATCAAA +
Preference number: 4 (lower is better)
Translates to: TNRAEHVNTRTRHCTMGFCYVTS*RFEVIK
Trigger: TTTGATAACCTCAAACCTTCAGGAGGTTACATAACA...AAACCCCATAGTACAGTGCCTTGTCCTAGTGTTCACATGTTCAGCTCTGTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR TCA 90 bp ATGATCAAGTTTCTGTTTTTATTCAGTGCACGAGTAGACGCTATTTCAGTATCATGGGTAAAGGCTGAATaGGACTGGCGGTTCCATTTG +
Preference number: 4 (lower is better)
Translates to: MIKFLFLFSARVDAISVSWVKAE*DWRFHL
Trigger: CAAATGGAACCGCCAGTCTCATTCAGCCTTTACCCA...TGATACTGAAATAGCGTCTACTCGTGCACTGAATAAAAACAGAAACTTGATCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR TCA 90 bp GATGCCTCATTTCCAAGTAATACTTTTTATAGCCCTGAAAATGGAAACCTTGGCCCCATGAGGCAATGTTaGAGAAGAATAAGGAATGGG +
Preference number: 4 (lower is better)
Translates to: DASFPSNTFYSPENGNLGPMRQC*RRIRNG
Trigger: CCCATTCCTTATTCTTCTTCAACATTGCCTCATGGG...GCCAAGGTTTCCATTTTCAGGGCTATAAAAAGTATTACTTGGAAATGAGGCATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR TCA 90 bp GATCAAGTTTCTGTTTTTATTCAGTGCACGAGTAGACGCTATTTCAGTATCAGGCTCTATTCTTTTGATTaGGAAGCTCCTGTCGCCGAA +
Preference number: 4 (lower is better)
Translates to: DQVSVFIQCTSRRYFSIRLYSFD*EAPVAE
Trigger: TTCGGCGACAGGAGCTTCTCAATCAAAAGAATAGAG...CCTGATACTGAAATAGCGTCTACTCGTGCACTGAATAAAAACAGAAACTTGATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR TCA 90 bp AATAAGGATAGCTGTCATCAGCGTAGAGGTCACTGGTATAAACAAACAGTAGCTGTCACTGATGCTGGTTaGTTTGAAGAAAGTGGTTCA +
Preference number: 4 (lower is better)
Translates to: NKDSCHQRRGHWYKQTVAVTDAG*FEESGS
Trigger: TGAACCACTTTCTTCAAATCAACCAGCATCAGTGAC...AGCTACTGTTTGTTTATACCAGTGACCTCTACGCTGATGACAGCTATCCTTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS-3UTR TCA 90 bp ATGATCAAGTTTCTGTTTTTATTCAGTGCACGAGTAGACGCTATTTCAGTATCACTGTCCATGAATAGGTaGTACAGATCCAGGGGACAC +
Preference number: 4 (lower is better)
Translates to: MIKFLFLFSARVDAISVSLSMNR*YRSRGH
Trigger: GTGTCCCCTGGATCTGTATCACCTATTCATGGACAG...TGATACTGAAATAGCGTCTACTCGTGCACTGAATAAAAACAGAAACTTGATCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR TCA 90 bp ATCAAGTTTCTGTTTTTATTCAGTGCACGAGTAGACGCTATTTCAGTATCAGGCCTGTTGACTTGGATCTaGGTCTGTCGTCATCTTAAC +
Preference number: 4 (lower is better)
Translates to: IKFLFLFSARVDAISVSGLLTWI*VCRHLN
Trigger: GTTAAGATGACGACAGACTCAGATCCAAGTCAACAG...GCCTGATACTGAAATAGCGTCTACTCGTGCACTGAATAAAAACAGAAACTTGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR GCA 90 bp GTACTATGGGGTTTGGTTTCTTTATGGGAAAGGTGTTTGCATAGATTGCTAGCTGAAAACATAGGGGGTTaGTTCATAATAGGAGGGAGA +
Preference number: 4 (lower is better)
Translates to: VLWGLVSLWERCLHRLLAENIGG*FIIGGR
Trigger: TCTCCCTCCTATTATGAAGCAACCCCCTATGTTTTC...AGCTAGCAATCTATGCAAACACCTTTCCCATAAAGAAACCAAACCCCATAGTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR GCA 90 bp TTAAAGTGCTACTCGAATAAGGATAGCTGTCATCAGCGTAGAGGTCACTGGTATGTCAGTAAGGTGCATTaGAAGAATAAACTCTTCTGC +
Preference number: 4 (lower is better)
Translates to: LKCYSNKDSCHQRRGHWYVSKVH*KNKLFC
Trigger: GCAGAAGAGTTTATTCTTGCAATGCACCTTACTGAC...ATACCAGTGACCTCTACGCTGATGACAGCTATCCTTATTCGAGTAGCACTTTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS-3UTR GCA 90 bp GTACTATGGGGTTTGGTTTCTTTATGGGAAAGGTGTTTGCATAGATTGCTAGCTAGATCTGCTGATGTTTaGCATTCAGTGCTTCCAACT +
Preference number: 4 (lower is better)
Translates to: VLWGLVSLWERCLHRLLARSADV*HSVLPT
Trigger: AGTTGGAAGCACTGAATGGCAAACATCAGCAGATCT...AGCTAGCAATCTATGCAAACACCTTTCCCATAAAGAAACCAAACCCCATAGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR GCA 90 bp ACTCAAGCACAAATCATTTTAAAGTGCTACTCGAATAAGGATAGCTGTCATCAGATTGTGTCCAGGGTTTaGAGATCAGCACACCACTGT +
Preference number: 4 (lower is better)
Translates to: TQAQIILKCYSNKDSCHQIVSRV*RSAHHC
Trigger: ACAGTGGTGTGCTGATCTGCAAACCCTGGACACAAT...CTGATGACAGCTATCCTTATTCGAGTAGCACTTTAAAATGATTTGTGCTTGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS-3UTR GCA 90 bp TTTCACTGTTTCACAGTTCCTCCAGAGATACCAGTTTATGAAAATGTCAGATGTTTCCTCTCAATTGGCTaGATTGTGTCCAGGGTTTGC +
Preference number: 4 (lower is better)
Translates to: FHCFTVPPEIPVYENVRCFLSIG*IVSRVC
Trigger: GCAAACCCTGGACACAATGCAGCCAATTGAGAGGAA...ACATCTGACATTTTCATAAACTGGTATCTCTGGAGGAACTGTGAAACAGTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS-3UTR CCA 90 bp ATCAAGTTTCTGTTTTTATTCAGTGCACGAGTAGACGCTATTTCAGTATCAGGCAATAGCCCACATGTTTaGCCCTCCATTCATAGCTGT +
Preference number: 4 (lower is better)
Translates to: IKFLFLFSARVDAISVSGNSPHV*PSIHSC
Trigger: ACAGCTATGAATGGAGGGCCAAACATGTGGGCTATT...GCCTGATACTGAAATAGCGTCTACTCGTGCACTGAATAAAAACAGAAACTTGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CCA 90 bp TTTCACTGTTTCACAGTTCCTCCAGAGATACCAGTTTATGAAAATGTCAGATGTGAGGAATGGACAGATTaGGCATGCTTCCCATTCCAA +
Preference number: 4 (lower is better)
Translates to: FHCFTVPPEIPVYENVRCEEWTD*ACFPFQ
Trigger: TTGGAATGGGAAGCATGCCCAATCTGTCCATTCCTC...ACATCTGACATTTTCATAAACTGGTATCTCTGGAGGAACTGTGAAACAGTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS-3UTR TCA 90 bp AAGTTTCTGTTTTTATTCAGTGCACGAGTAGACGCTATTTCAGTATCAGGCCGCTGTTATGTAACCTCCTaGAGGTTTGAGGTTATCAAA +
Preference number: 4 (lower is better)
Translates to: KFLFLFSARVDAISVSGRCYVTS*RFEVIK
Trigger: TTTGATAACCTCAAACCTTCAGGAGGTTACATAACA...GCGGCCTGATACTGAAATAGCGTCTACTCGTGCACTGAATAAAAACAGAAACTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR TCA 90 bp TTGTTCACTCAAGCACAAATCATTTTAAAGTGCTACTCGAATAAGGATAGCTGTGGCAACTGTTGGCCTTaGAGCTTCAGTTTGATGAGT +
Preference number: 4 (lower is better)
Translates to: LFTQAQIILKCYSNKDSCGNCWP*SFSLMS
Trigger: ACTCATCAAACTGAAGCTTCAAGGCCAACAGTTGCC...ACAGCTATCCTTATTCGAGTAGCACTTTAAAATGATTTGTGCTTGAGTGAACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS-3UTR TCA 90 bp TTTCACTGTTTCACAGTTCCTCCAGAGATACCAGTTTATGAAAATGTCAGATGTCCCATGAGGCAATGTTaGAGAAGAATAAGGAATGGG +
Preference number: 4 (lower is better)
Translates to: FHCFTVPPEIPVYENVRCPMRQC*RRIRNG
Trigger: CCCATTCCTTATTCTTCTTCAACATTGCCTCATGGG...ACATCTGACATTTTCATAAACTGGTATCTCTGGAGGAACTGTGAAACAGTGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS-3UTR TCA 90 bp GATGCCTCATTTCCAAGTAATACTTTTTATAGCCCTGAAAATGGAAACCTTGGCTTTGAGTTTGCTTTTTaGGTCGGACATCCTGAAGTC +
Preference number: 4 (lower is better)
Translates to: DASFPSNTFYSPENGNLGFEFAF*VGHPEV
Trigger: GACTTCAGGATGTCCGACTCAAAAAGCAAACTCAAA...GCCAAGGTTTCCATTTTCAGGGCTATAAAAAGTATTACTTGGAAATGAGGCATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR TCA 90 bp GATGCCTCATTTCCAAGTAATACTTTTTATAGCCCTGAAAATGGAAACCTTGGCGTCACTGATGCTGGTTaGTTTGAAGAAAGTGGTTCA +
Preference number: 4 (lower is better)
Translates to: DASFPSNTFYSPENGNLGVTDAG*FEESGS
Trigger: TGAACCACTTTCTTCAAATCAACCAGCATCAGTGAC...GCCAAGGTTTCCATTTTCAGGGCTATAAAAAGTATTACTTGGAAATGAGGCATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR TCA 90 bp GATCAAGTTTCTGTTTTTATTCAGTGCACGAGTAGACGCTATTTCAGTATCAGGGTCCCTTGGAGAAACTaGGCTCATCTTCATTATTTG +
Preference number: 4 (lower is better)
Translates to: DQVSVFIQCTSRRYFSIRVPWRN*AHLHYL
Trigger: CAAATAATGAAGATGAGCTCAGTTTCTCCAAGGGAC...CCTGATACTGAAATAGCGTCTACTCGTGCACTGAATAAAAACAGAAACTTGATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR TCA 90 bp ATGATCAAGTTTCTGTTTTTATTCAGTGCACGAGTAGACGCTATTTCAGTATCACATTGGACTTCGAGCTaGAAAGTTTCTCAGAGCCAG +
Preference number: 4 (lower is better)
Translates to: MIKFLFLFSARVDAISVSHWTSS*KVSQSQ
Trigger: CTGGCTCTGAGAAACTTTTCAGCTCGAAGTCCAATG...TGATACTGAAATAGCGTCTACTCGTGCACTGAATAAAAACAGAAACTTGATCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR GCA 90 bp TTAAAGTGCTACTCGAATAAGGATAGCTGTCATCAGCGTAGAGGTCACTGGTATAAATCAATCAGAGACTaGGCTTTCTGTATACTAGCA +
Preference number: 4 (lower is better)
Translates to: LKCYSNKDSCHQRRGHWYKSIRD*AFCILA
Trigger: TGCTAGTATACAGAAAGCGCAGTCTCTGATTGATTT...ATACCAGTGACCTCTACGCTGATGACAGCTATCCTTATTCGAGTAGCACTTTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS-3UTR GCA 90 bp ATCAAGTTTCTGTTTTTATTCAGTGCACGAGTAGACGCTATTTCAGTATCAGGCATTTCCAAGTCACACTaGTTATCCAGAACTTCCAGC +
Preference number: 4 (lower is better)
Translates to: IKFLFLFSARVDAISVSGISKSH*LSRTSS
Trigger: GCTGGAAGTTCTGGATAAGCAGTGTGACTTGGAAAT...GCCTGATACTGAAATAGCGTCTACTCGTGCACTGAATAAAAACAGAAACTTGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR GCA 90 bp TCACAGTATGGGTTGCTCTTTCCATTTGGTTTGCAGGCTTTTAATTCTGTAGCTTTTCACAGTATGGGTTaGTCTTTCCATTTGGTTTGC +
Preference number: 4 (lower is better)
Translates to: SQYGLLFPFGLQAFNSVAFHSMG*SFHLVC
Trigger: GCAAACCAAATGGAAAGAGCAACCCATACTGTGAAA...AGCTACAGAATTAAAAGCCTGCAAACCAAATGGAAAGAGCAACCCATACTGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427234.5
ENST00000449392.1
CDS-3UTR GCA 90 bp AAGTTTCTGTTTTTATTCAGTGCACGAGTAGACGCTATTTCAGTATCAGGCCGCTTCTGTTCGAATTTTTaGCACTGGAATTTCAGTACG +
Preference number: 4 (lower is better)
Translates to: KFLFLFSARVDAISVSGRFCSNF*HWNFST
Trigger: CGTACTGAAATTCCAGTGGCAAAAATTCGAACAGAA...GCGGCCTGATACTGAAATAGCGTCTACTCGTGCACTGAATAAAAACAGAAACTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CCA 90 bp CTCTTTCTGTACATATGGGCAATGATAAAGCTTAAAGATGCATGTCCTAAGAAATCCCTCGCTCATAGTTaGCTTTCCGTTTGTCCTCAA +
Preference number: 4 (lower is better)
Translates to: LFLYIWAMIKLKDACPKKSLAHS*LSVCPQ
Trigger: TTGAGGACAAACGGAAAGCCAACTATGAGCGAGGGA...TTTCTTAGGACATGCATCTTTAAGCTTTATCATTGCCCATATGTACAGAAAGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CCA 90 bp GTACTATGGGGTTTGGTTTCTTTATGGGAAAGGTGTTTGCATAGATTGCTAGCTTGCATACAAAGCTTCTaGTTCTTCCCGTTTTACTTC +
Preference number: 4 (lower is better)
Translates to: VLWGLVSLWERCLHRLLACIQSF*FFPFYF
Trigger: GAAGTAAAACGGGAAGAACCAGAAGCTTTGTATGCA...AGCTAGCAATCTATGCAAACACCTTTCCCATAAAGAAACCAAACCCCATAGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CCA 90 bp TTTCACTGTTTCACAGTTCCTCCAGAGATACCAGTTTATGAAAATGTCAGATGTTCTTTTCCTCTCAATTaGCTGCATTGTGTCCAGGGT +
Preference number: 4 (lower is better)
Translates to: FHCFTVPPEIPVYENVRCSFPLN*LHCVQG
Trigger: ACCCTGGACACAATGCAGCCAATTGAGAGGAAAAGA...ACATCTGACATTTTCATAAACTGGTATCTCTGGAGGAACTGTGAAACAGTGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS-3UTR CCA 90 bp GATGCCTCATTTCCAAGTAATACTTTTTATAGCCCTGAAAATGGAAACCTTGGCGCTGATTTCACAGTATaGGTTGCTCTTTCCATTTGG +
Preference number: 4 (lower is better)
Translates to: DASFPSNTFYSPENGNLGADFTV*VALSIW
Trigger: CCAAATGGAAAGAGCAACCCATACTGTGAAATCAGC...GCCAAGGTTTCCATTTTCAGGGCTATAAAAAGTATTACTTGGAAATGAGGCATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000427234.5
ENST00000622089.4
CDS-3UTR CCA 90 bp GATGCCTCATTTCCAAGTAATACTTTTTATAGCCCTGAAAATGGAAACCTTGGCTCGAATTTTTGCCACTaGAATTTCAGTACGACCCAG +
Preference number: 4 (lower is better)
Translates to: DASFPSNTFYSPENGNLGSNFCH*NFSTTQ
Trigger: CTGGGTCGTACTGAAATTCCAGTGGCAAAAATTCGA...GCCAAGGTTTCCATTTTCAGGGCTATAAAAAGTATTACTTGGAAATGAGGCATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000427234.5
ENST00000622089.4
CDS-3UTR CCA 90 bp ATCAAGTTTCTGTTTTTATTCAGTGCACGAGTAGACGCTATTTCAGTATCAGGCTCGAATTTTTGCCACTaGAATTTCAGTACGACCCAG +
Preference number: 4 (lower is better)
Translates to: IKFLFLFSARVDAISVSGSNFCH*NFSTTQ
Trigger: CTGGGTCGTACTGAAATTCCAGTGGCAAAAATTCGA...GCCTGATACTGAAATAGCGTCTACTCGTGCACTGAATAAAAACAGAAACTTGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR TCA 90 bp ATGATCAAGTTTCTGTTTTTATTCAGTGCACGAGTAGACGCTATTTCAGTATCACTCTATTCTTTTGATTaGGAAGCTCCTGTCGCCGAA +
Preference number: 4 (lower is better)
Translates to: MIKFLFLFSARVDAISVSLYSFD*EAPVAE
Trigger: TTCGGCGACAGGAGCTTCTCAATCAAAAGAATAGAG...TGATACTGAAATAGCGTCTACTCGTGCACTGAATAAAAACAGAAACTTGATCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR TCA 90 bp GATGCCTCATTTCCAAGTAATACTTTTTATAGCCCTGAAAATGGAAACCTTGGCTCCAGGTTCCACACTTaGATATGGATAAAGTGCAAT +
Preference number: 4 (lower is better)
Translates to: DASFPSNTFYSPENGNLGSRFHT*IWIKCN
Trigger: ATTGCACTTTATCCATATTCAAGTGTGGAACCTGGA...GCCAAGGTTTCCATTTTCAGGGCTATAAAAAGTATTACTTGGAAATGAGGCATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR TCA 90 bp ACTCAAGCACAAATCATTTTAAAGTGCTACTCGAATAAGGATAGCTGTCATCAGGATACAACCATGAGGTaGACACTTTCACTGTTTCAC +
Preference number: 4 (lower is better)
Translates to: TQAQIILKCYSNKDSCHQDTTMR*TLSLFH
Trigger: GTGAAACAGTGAAAGTGTTCACCTCATGGTTGTATC...CTGATGACAGCTATCCTTATTCGAGTAGCACTTTAAAATGATTTGTGCTTGAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS-3UTR TCA 90 bp CAAGCACAAATCATTTTAAAGTGCTACTCGAATAAGGATAGCTGTCATCAGCGTAAACTGATACAACCATaGGGTGAACACTTTCACTGT +
Preference number: 4 (lower is better)
Translates to: QAQIILKCYSNKDSCHQRKLIQP*GEHFHC
Trigger: ACAGTGAAAGTGTTCACCTCATGGTTGTATCAGTTT...ACGCTGATGACAGCTATCCTTATTCGAGTAGCACTTTAAAATGATTTGTGCTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS-3UTR GCA 90 bp TTTCACTGTTTCACAGTTCCTCCAGAGATACCAGTTTATGAAAATGTCAGATGTTCAAACTGCCTGTCATaGTTAGTACGTTCTTCAGAG +
Preference number: 4 (lower is better)
Translates to: FHCFTVPPEIPVYENVRCSNCLS*LVRSSE
Trigger: CTCTGAAGAACGTACTAAGCATGACAGGCAGTTTGA...ACATCTGACATTTTCATAAACTGGTATCTCTGGAGGAACTGTGAAACAGTGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS-3UTR GCA 90 bp CAAGCACAAATCATTTTAAAGTGCTACTCGAATAAGGATAGCTGTCATCAGCGTATGTTTGCCATTCAGTaGTTCCAACTCAAGATGAAG +
Preference number: 4 (lower is better)
Translates to: QAQIILKCYSNKDSCHQRMFAIQ*FQLKMK
Trigger: CTTCATCTTGAGTTGGAAGCACTGAATGGCAAACAT...ACGCTGATGACAGCTATCCTTATTCGAGTAGCACTTTAAAATGATTTGTGCTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS-3UTR GCA 90 bp ATGATCAAGTTTCTGTTTTTATTCAGTGCACGAGTAGACGCTATTTCAGTATCATCTTCATCTGTCTTCTaGTGTAACAGAGCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: MIKFLFLFSARVDAISVSSSSVF*CNRAAP
Trigger: TGGAGCAGCTCTGTTACAGCAGAAGACAGATGAAGA...TGATACTGAAATAGCGTCTACTCGTGCACTGAATAAAAACAGAAACTTGATCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR GCA 90 bp TATGGGTTGCTCTTTCCATTTGGTTTGCAGGCTTTTAATTCTGTAGCTTCAATGTTTCACAGTATGGGTTaGTCTTTCCATTTGGTTTGC +
Preference number: 4 (lower is better)
Translates to: YGLLFPFGLQAFNSVASMFHSMG*SFHLVC
Trigger: GCAAACCAAATGGAAAGAGCAACCCATACTGTGAAA...CATTGAAGCTACAGAATTAAAAGCCTGCAAACCAAATGGAAAGAGCAACCCATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427234.5
ENST00000449392.1
CDS-3UTR CCA 90 bp ACTCAAGCACAAATCATTTTAAAGTGCTACTCGAATAAGGATAGCTGTCATCAGAAACTCATCTCATCATaGTTCCTTGCTTCAAAGGGG +
Preference number: 4 (lower is better)
Translates to: TQAQIILKCYSNKDSCHQKLISS*FLASKG
Trigger: CCCCTTTGAAGCAAGGAACCATGATGAGATGAGTTT...CTGATGACAGCTATCCTTATTCGAGTAGCACTTTAAAATGATTTGTGCTTGAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS-3UTR CCA 90 bp CAAGCACAAATCATTTTAAAGTGCTACTCGAATAAGGATAGCTGTCATCAGCGTGGCTCTTTCACTACTTaGACCCAAAAGTTTAACATG +
Preference number: 4 (lower is better)
Translates to: QAQIILKCYSNKDSCHQRGSFTT*TQKFNM
Trigger: CATGTTAAACTTTTGGGTCCAAGTAGTGAAAGAGCC...ACGCTGATGACAGCTATCCTTATTCGAGTAGCACTTTAAAATGATTTGTGCTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS-3UTR CCA 90 bp GATCAAGTTTCTGTTTTTATTCAGTGCACGAGTAGACGCTATTTCAGTATCAGGGGCTCTTTCACTACTTaGACCCAAAAGTTTAACATG +
Preference number: 4 (lower is better)
Translates to: DQVSVFIQCTSRRYFSIRGSFTT*TQKFNM
Trigger: CATGTTAAACTTTTGGGTCCAAGTAGTGAAAGAGCC...CCTGATACTGAAATAGCGTCTACTCGTGCACTGAATAAAAACAGAAACTTGATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CCA 90 bp ATGATCAAGTTTCTGTTTTTATTCAGTGCACGAGTAGACGCTATTTCAGTATCATCTTTTCCTCTCAATTaGCTGCATTGTGTCCAGGGT +
Preference number: 4 (lower is better)
Translates to: MIKFLFLFSARVDAISVSSFPLN*LHCVQG
Trigger: ACCCTGGACACAATGCAGCCAATTGAGAGGAAAAGA...TGATACTGAAATAGCGTCTACTCGTGCACTGAATAAAAACAGAAACTTGATCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR TCA 90 bp CAAGCACAAATCATTTTAAAGTGCTACTCGAATAAGGATAGCTGTCATCAGCGTTGTTATGTAACCTCCTaGAGGTTTGAGGTTATCAAA +
Preference number: 4 (lower is better)
Translates to: QAQIILKCYSNKDSCHQRCYVTS*RFEVIK
Trigger: TTTGATAACCTCAAACCTTCAGGAGGTTACATAACA...ACGCTGATGACAGCTATCCTTATTCGAGTAGCACTTTAAAATGATTTGTGCTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS-3UTR TCA 90 bp ACTCAAGCACAAATCATTTTAAAGTGCTACTCGAATAAGGATAGCTGTCATCAGTCTAGCTTGAAAACCTaGGAGATATCCACTCATACT +
Preference number: 4 (lower is better)
Translates to: TQAQIILKCYSNKDSCHQSSLKT*EISTHT
Trigger: AGTATGAGTGGATATCTCTCAGGTTTTCAAGCTAGA...CTGATGACAGCTATCCTTATTCGAGTAGCACTTTAAAATGATTTGTGCTTGAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS-3UTR TCA 90 bp TTGTTCACTCAAGCACAAATCATTTTAAAGTGCTACTCGAATAAGGATAGCTGTAGGGCATTTCTAGCTTaGAAACCTGAGAGATATCCA +
Preference number: 4 (lower is better)
Translates to: LFTQAQIILKCYSNKDSCRAFLA*KPERYP
Trigger: TGGATATCTCTCAGGTTTTCAAGCTAGAAATGCCCT...ACAGCTATCCTTATTCGAGTAGCACTTTAAAATGATTTGTGCTTGAGTGAACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS-3UTR TCA 90 bp ATGATCAAGTTTCTGTTTTTATTCAGTGCACGAGTAGACGCTATTTCAGTATCAACTGGTAATTTCTTCTaGGGCTCCTCTTCTTGCATT +
Preference number: 4 (lower is better)
Translates to: MIKFLFLFSARVDAISVSTGNFF*GSSSCI
Trigger: AATGCAAGAAGAGGAGCCTCAGAAGAAATTACCAGT...TGATACTGAAATAGCGTCTACTCGTGCACTGAATAAAAACAGAAACTTGATCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR TCA 90 bp GATCAAGTTTCTGTTTTTATTCAGTGCACGAGTAGACGCTATTTCAGTATCAGGGCTTCCAACTCAAGATaGAGATTCTTCTTTTTAGAG +
Preference number: 4 (lower is better)
Translates to: DQVSVFIQCTSRRYFSIRASNSR*RFFFLE
Trigger: CTCTAAAAAGAAGAATCTTCATCTTGAGTTGGAAGC...CCTGATACTGAAATAGCGTCTACTCGTGCACTGAATAAAAACAGAAACTTGATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR TCA 90 bp CTCTTTCTGTACATATGGGCAATGATAAAGCTTAAAGATGCATGTCCTAAGAAATTTGAGTTTGCTTTTTaGGTCGGACATCCTGAAGTC +
Preference number: 4 (lower is better)
Translates to: LFLYIWAMIKLKDACPKKFEFAF*VGHPEV
Trigger: GACTTCAGGATGTCCGACTCAAAAAGCAAACTCAAA...TTTCTTAGGACATGCATCTTTAAGCTTTATCATTGCCCATATGTACAGAAAGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR TCA 90 bp TTGTTCACTCAAGCACAAATCATTTTAAAGTGCTACTCGAATAAGGATAGCTGTTTTGAGTTTGCTTTTTaGGTCGGACATCCTGAAGTC +
Preference number: 4 (lower is better)
Translates to: LFTQAQIILKCYSNKDSCFEFAF*VGHPEV
Trigger: GACTTCAGGATGTCCGACTCAAAAAGCAAACTCAAA...ACAGCTATCCTTATTCGAGTAGCACTTTAAAATGATTTGTGCTTGAGTGAACAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS-3UTR TCA 90 bp TTGTTCACTCAAGCACAAATCATTTTAAAGTGCTACTCGAATAAGGATAGCTGTCATCTTAACGTAGTTTaGAGGAAAGAGACCAGTCAC +
Preference number: 4 (lower is better)
Translates to: LFTQAQIILKCYSNKDSCHLNVV*RKETSH
Trigger: GTGACTGGTCTCTTTCCTTCAAACTACGTTAAGATG...ACAGCTATCCTTATTCGAGTAGCACTTTAAAATGATTTGTGCTTGAGTGAACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS-3UTR TCA 90 bp GATGCCTCATTTCCAAGTAATACTTTTTATAGCCCTGAAAATGGAAACCTTGGCCCGTTTTATACATTTTaGATTGAGCATTGGACTTCG +
Preference number: 4 (lower is better)
Translates to: DASFPSNTFYSPENGNLGPFYTF*IEHWTS
Trigger: CGAAGTCCAATGCTCAATTCAAAATGTATAAAACGG...GCCAAGGTTTCCATTTTCAGGGCTATAAAAAGTATTACTTGGAAATGAGGCATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000427234.5
CDS-3UTR GCA 90 bp ATGATCAAGTTTCTGTTTTTATTCAGTGCACGAGTAGACGCTATTTCAGTATCATCAAACTGCCTGTCATaGTTAGTACGTTCTTCAGAG +
Preference number: 4 (lower is better)
Translates to: MIKFLFLFSARVDAISVSSNCLS*LVRSSE
Trigger: CTCTGAAGAACGTACTAAGCATGACAGGCAGTTTGA...TGATACTGAAATAGCGTCTACTCGTGCACTGAATAAAAACAGAAACTTGATCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR GCA 90 bp ATGATCAAGTTTCTGTTTTTATTCAGTGCACGAGTAGACGCTATTTCAGTATCAGAAAACATAGGGGGTTaGTTCATAATAGGAGGGAGA +
Preference number: 4 (lower is better)
Translates to: MIKFLFLFSARVDAISVSENIGG*FIIGGR
Trigger: TCTCCCTCCTATTATGAAGCAACCCCCTATGTTTTC...TGATACTGAAATAGCGTCTACTCGTGCACTGAATAAAAACAGAAACTTGATCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR GCA 90 bp ATCAAGTTTCTGTTTTTATTCAGTGCACGAGTAGACGCTATTTCAGTATCAGGCTCTGTTTTTATTCAGTaGACGAGTAGACGCTATTTC +
Preference number: 4 (lower is better)
Translates to: IKFLFLFSARVDAISVSGSVFIQ*TSRRYF
Trigger: GAAATAGCGTCTACTCGTGCACTGAATAAAAACAGA...GCCTGATACTGAAATAGCGTCTACTCGTGCACTGAATAAAAACAGAAACTTGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CCA 90 bp CTCTTTCTGTACATATGGGCAATGATAAAGCTTAAAGATGCATGTCCTAAGAAAAAACTCATCTCATCATaGTTCCTTGCTTCAAAGGGG +
Preference number: 4 (lower is better)
Translates to: LFLYIWAMIKLKDACPKKKLISS*FLASKG
Trigger: CCCCTTTGAAGCAAGGAACCATGATGAGATGAGTTT...TTTCTTAGGACATGCATCTTTAAGCTTTATCATTGCCCATATGTACAGAAAGAG
38% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CCA 90 bp GTACTATGGGGTTTGGTTTCTTTATGGGAAAGGTGTTTGCATAGATTGCTAGCTTTTGAGAAGTTCAAGTaGTTATCTTTCTTTGCAGTC +
Preference number: 4 (lower is better)
Translates to: VLWGLVSLWERCLHRLLAFEKFK*LSFFAV
Trigger: GACTGCAAAGAAAGATAACCACTTGAACTTCTCAAA...AGCTAGCAATCTATGCAAACACCTTTCCCATAAAGAAACCAAACCCCATAGTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CCA 90 bp ACTCAAGCACAAATCATTTTAAAGTGCTACTCGAATAAGGATAGCTGTCATCAGTGCATACAAAGCTTCTaGTTCTTCCCGTTTTACTTC +
Preference number: 4 (lower is better)
Translates to: TQAQIILKCYSNKDSCHQCIQSF*FFPFYF
Trigger: GAAGTAAAACGGGAAGAACCAGAAGCTTTGTATGCA...CTGATGACAGCTATCCTTATTCGAGTAGCACTTTAAAATGATTTGTGCTTGAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS-3UTR TCA 90 bp TTGTTCACTCAAGCACAAATCATTTTAAAGTGCTACTCGAATAAGGATAGCTGTTTTTATGAAGTAAACTaGCCCCTGAATCAGGTGTGT +
Preference number: 4 (lower is better)
Translates to: LFTQAQIILKCYSNKDSCFYEVN*PLNQVC
Trigger: ACACACCTGATTCAGGGGTCAGTTTACTTCATAAAA...ACAGCTATCCTTATTCGAGTAGCACTTTAAAATGATTTGTGCTTGAGTGAACAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS-3UTR TCA 90 bp CTCTTTCTGTACATATGGGCAATGATAAAGCTTAAAGATGCATGTCCTAAGAAATCCAGGTTCCACACTTaGATATGGATAAAGTGCAAT +
Preference number: 4 (lower is better)
Translates to: LFLYIWAMIKLKDACPKKSRFHT*IWIKCN
Trigger: ATTGCACTTTATCCATATTCAAGTGTGGAACCTGGA...TTTCTTAGGACATGCATCTTTAAGCTTTATCATTGCCCATATGTACAGAAAGAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR GCA 90 bp ATGATCAAGTTTCTGTTTTTATTCAGTGCACGAGTAGACGCTATTTCAGTATCAATGTTTGCCATTCAGTaGTTCCAACTCAAGATGAAG +
Preference number: 4 (lower is better)
Translates to: MIKFLFLFSARVDAISVSMFAIQ*FQLKMK
Trigger: CTTCATCTTGAGTTGGAAGCACTGAATGGCAAACAT...TGATACTGAAATAGCGTCTACTCGTGCACTGAATAAAAACAGAAACTTGATCAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR GCA 90 bp GATGCCTCATTTCCAAGTAATACTTTTTATAGCCCTGAAAATGGAAACCTTGGCTTTCTTATTTACAGCTaGATACAAAGCTTCTGGTTC +
Preference number: 4 (lower is better)
Translates to: DASFPSNTFYSPENGNLGFLIYS*IQSFWF
Trigger: GAACCAGAAGCTTTGTATGCAGCTGTAAATAAGAAA...GCCAAGGTTTCCATTTTCAGGGCTATAAAAAGTATTACTTGGAAATGAGGCATC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CCA 90 bp ATGATCAAGTTTCTGTTTTTATTCAGTGCACGAGTAGACGCTATTTCAGTATCATGCATACAAAGCTTCTaGTTCTTCCCGTTTTACTTC +
Preference number: 4 (lower is better)
Translates to: MIKFLFLFSARVDAISVSCIQSF*FFPFYF
Trigger: GAAGTAAAACGGGAAGAACCAGAAGCTTTGTATGCA...TGATACTGAAATAGCGTCTACTCGTGCACTGAATAAAAACAGAAACTTGATCAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CCA 90 bp CTCTTTCTGTACATATGGGCAATGATAAAGCTTAAAGATGCATGTCCTAAGAAACACTCTCCATCTTTCTaGGTCACCAATATTTCTTCA +
Preference number: 4 (lower is better)
Translates to: LFLYIWAMIKLKDACPKKHSPSF*VTNISS
Trigger: TGAAGAAATATTGGTGACCCAGAAAGATGGAGAGTG...TTTCTTAGGACATGCATCTTTAAGCTTTATCATTGCCCATATGTACAGAAAGAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR TCA 90 bp CTCTTTCTGTACATATGGGCAATGATAAAGCTTAAAGATGCATGTCCTAAGAAAGCTTCCAACTCAAGATaGAGATTCTTCTTTTTAGAG +
Preference number: 4 (lower is better)
Translates to: LFLYIWAMIKLKDACPKKASNSR*RFFFLE
Trigger: CTCTAAAAAGAAGAATCTTCATCTTGAGTTGGAAGC...TTTCTTAGGACATGCATCTTTAAGCTTTATCATTGCCCATATGTACAGAAAGAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR GCA 90 bp TTTCACTGTTTCACAGTTCCTCCAGAGATACCAGTTTATGAAAATGTCAGATGTCTCATCTTCATTATTTaGTGCATAGTCATACATAGC +
Preference number: 4 (lower is better)
Translates to: FHCFTVPPEIPVYENVRCLIFII*CIVIHS
Trigger: GCTATGTATGACTATGCAGCAAATAATGAAGATGAG...ACATCTGACATTTTCATAAACTGGTATCTCTGGAGGAACTGTGAAACAGTGAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS CCA 90 bp CCCGCTCGTCACAGCGCGACTCCGCGTCCCTCAGCACCGGCAGCCTaGGCGCGGGCAGGCGCGGGGAGACCCTGCTCTGCCGCCGTCGCC +
Preference number: 5 (lower is better)
Translates to: PARHSATPRPSAPAA*ARAGAGRPCSAAVA
Trigger: GGCGACGGCGGCAGAGCAGGGTCTCCCCGCGCCTGCCCGCGCCCAGGCTGCCGGTGCTGAGGGACGCGGAGTCGCGCTGTGACGAGCGGG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355123.9
ENST00000406921.7
ENST00000407704.1
ENST00000412011.5
ENST00000443927.5
CDS GCA 90 bp AGCACCGGCAGCCTGGGCGCGGGCAGGCGCGGGGAGACCCTGCTCTaGCGCCGTCGCCGCCACTGCAGCTGGCTTGGTCGTCAGGCCGCC +
Preference number: 5 (lower is better)
Translates to: STGSLGAGRRGETLL*RRRRHCSWLGRQAA
Trigger: GGCGGCCTGACGACCAAGCCAGCTGCAGTGGCGGCGACGGCGGCAGAGCAGGGTCTCCCCGCGCCTGCCCGCGCCCAGGCTGCCGGTGCT
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355123.9
ENST00000406921.7
ENST00000407704.1
ENST00000412011.5
ENST00000443927.5
CDS GCA 90 bp GCGGGCAGGCGCGGGGAGACCCTGCTCTGCCGCCGTCGCCGCCACTaGAGCTGGCTTGGTCGTCAGGCCGCCGCCCGCGAACCTGTTGCG +
Preference number: 5 (lower is better)
Translates to: AGRRGETLLCRRRRH*SWLGRQAAAREPVA
Trigger: CGCAACAGGTTCGCGGGCGGCGGCCTGACGACCAAGCCAGCTGCAGTGGCGGCGACGGCGGCAGAGCAGGGTCTCCCCGCGCCTGCCCGC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355123.9
ENST00000406921.7
ENST00000407704.1
ENST00000412011.5
ENST00000443927.5
CDS GCA 90 bp CCCTCAGCACCGGCAGCCTGGGCGCGGGCAGGCGCGGGGAGACCCTaGTCTGCCGCCGTCGCCGCCACTGCAGCTGGCTTGGTCGTCAGG +
Preference number: 5 (lower is better)
Translates to: PSAPAAWARAGAGRP*SAAVAATAAGLVVR
Trigger: CCTGACGACCAAGCCAGCTGCAGTGGCGGCGACGGCGGCAGAGCAGGGTCTCCCCGCGCCTGCCCGCGCCCAGGCTGCCGGTGCTGAGGG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355123.9
ENST00000406921.7
ENST00000407704.1
ENST00000412011.5
ENST00000443927.5
CDS GCA 90 bp CCACTGCAGCTGGCTTGGTCGTCAGGCCGCCGCCCGCGAACCTGTTaGGTAGCCTGTCACAGCCGCTCAGGGCTCCGCCGGCGCCGCCTC +
Preference number: 5 (lower is better)
Translates to: PLQLAWSSGRRPRTC*VACHSRSGLRRRRL
Trigger: GAGGCGGCGCCGGCGGAGCCCTGAGCGGCTGTGACAGGCTACGCAACAGGTTCGCGGGCGGCGGCCTGACGACCAAGCCAGCTGCAGTGG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000406921.7
ENST00000412011.5
CDS CCA 90 bp CGGGGAGACCCTGCTCTGCCGCCGTCGCCGCCACTGCAGCTGGCTTaGTCGTCAGGCCGCCGCCCGCGAACCTGTTGCGTAGCCTGTCAC +
Preference number: 5 (lower is better)
Translates to: RGDPALPPSPPLQLA*SSGRRPRTCCVACH
Trigger: GTGACAGGCTACGCAACAGGTTCGCGGGCGGCGGCCTGACGACCAAGCCAGCTGCAGTGGCGGCGACGGCGGCAGAGCAGGGTCTCCCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355123.9
ENST00000406921.7
ENST00000412011.5
ENST00000443927.5
CDS-3UTR CAA 90 bp GAGCGCAGTCTCTCATTCTCCAGCCCCAGCCTTGTGGGCTGTCCCGCTGGTGCTTCTCCAGCCCCAGCCTaGTGGGCTGTCCCGCTGGTG +
Preference number: 5 (lower is better)
Translates to: ERSLSFSSPSLVGCPAGASPAPA*WAVPLV
Trigger: CACCAGCGGGACAGCCCACAAGGCTGGGGCTGGAGA...AGCACCAGCGGGACAGCCCACAAGGCTGGGGCTGGAGAATGAGAGACTGCGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000427234.5
ENST00000622089.4
CDS-3UTR CAA 90 bp CTGCATGGTGCTCCCTCAGCCCCAAGAGAGCGCAGTCTCTCATTCTCCAGCCCCTCTCCAGCCCCAGCCTaGTGGGCTGTCCCGCTGGTG +
Preference number: 5 (lower is better)
Translates to: LHGAPSAPRERSLSFSSPSPAPA*WAVPLV
Trigger: CACCAGCGGGACAGCCCACAAGGCTGGGGCTGGAGA...GGGGCTGGAGAATGAGAGACTGCGCTCTCTTGGGGCTGAGGGAGCACCATGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000427234.5
ENST00000622089.4
CDS CCA 90 bp CCAACCATAACACTACCGGCTCCCTGTCCCCATCTGCCACTGCCCTaGGCCCAACAGCCCAGCATCTGGCTGCCCTGTGCCTTTCCCCAG +
Preference number: 5 (lower is better)
Translates to: PTITLPAPCPHLPLP*AQQPSIWLPCAFPQ
Trigger: CTGGGGAAAGGCACAGGGCAGCCAGATGCTGGGCTGTTGGGCCCAGGGCAGTGGCAGATGGGGACAGGGAGCCGGTAGTGTTATGGTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478720.1
CDS-3UTR CAA 90 bp GCAGAGGTCACTGGCGTGGAATGGTTACAGCGTCACCAAACCACTCCACGGTGGCCGCCCGCGAACCTGTaGCGTAGCCTGTCACAGCCG +
Preference number: 5 (lower is better)
Translates to: AEVTGVEWLQRHQTTPRWPPANL*RSLSQP
Trigger: CGGCTGTGACAGGCTACGCAACAGGTTCGCGGGCGG...CCACCGTGGAGTGGTTTGGTGACGCTGTAACCATTCCACGCCAGTGACCTCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355123.9
CDS-3UTR CAA 90 bp CTCTATCCCCGTCCTTCCTTGATGGGGCTCCTGCCACATCCAACGAAGCCATGCCCGCCCGCGAACCTGTaGCGTAGCCTGTCACAGCCG +
Preference number: 5 (lower is better)
Translates to: LYPRPSLMGLLPHPTKPCPPANL*RSLSQP
Trigger: CGGCTGTGACAGGCTACGCAACAGGTTCGCGGGCGG...GCATGGCTTCGTTGGATGTGGCAGGAGCCCCATCAAGGAAGGACGGGGATAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS-3UTR CAA 90 bp GTCACCAAACCACTCCACGGTGGACACATTCAACCGAGCGGTAACATCTGGTGGGCCACTGCAGCTGGCTaGGTCGTCAGGCCGCCGCCC +
Preference number: 5 (lower is better)
Translates to: VTKPLHGGHIQPSGNIWWATAAG*VVRPPP
Trigger: GGGCGGCGGCCTGACGACCAAGCCAGCTGCAGTGGC...CCACCAGATGTTACCGCTCGGTTGAATGTGTCCACCGTGGAGTGGTTTGGTGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355123.9
CDS-3UTR CAA 90 bp GTCACCAAACCACTCCACGGTGGACACATTCAACCGAGCGGTAACATCTGGTGGTCTCCAGCCCCAGCCTaGTGGGCTGTCCCGCTGGTG +
Preference number: 5 (lower is better)
Translates to: VTKPLHGGHIQPSGNIWWSPAPA*WAVPLV
Trigger: CACCAGCGGGACAGCCCACAAGGCTGGGGCTGGAGA...CCACCAGATGTTACCGCTCGGTTGAATGTGTCCACCGTGGAGTGGTTTGGTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS TCA 90 bp ACTCTGCGTGGAGGCAGCCCTGAGTCTGATGCCCACCATCTCTCATaGGAGACAGCAGATACCCCGAGAGCTAGCCAGCAGCAGCCTCCT +
Preference number: 5 (lower is better)
Translates to: TLRGGSPESDAHHLS*ETADTPRASQQQPP
Trigger: AGGAGGCTGCTGCTGGCTAGCTCTCGGGGTATCTGCTGTCTCTCATGAGAGATGGTGGGCATCAGACTCAGGGCTGCCTCCACGCAGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS-3UTR CAA 90 bp CCTCAGCCCCAAGAGAGCGCAGTCTCTCATTCTCCAGCCCCAGCCTTGTGGGCTAGACCAGTCACCCCGTaGATCTCTCCTTGCCACCAA +
Preference number: 5 (lower is better)
Translates to: PQPQESAVSHSPAPALWARPVTP*ISPCHQ
Trigger: TTGGTGGCAAGGAGAGATCAACGGGGTGACTGGTCT...AGCCCACAAGGCTGGGGCTGGAGAATGAGAGACTGCGCTCTCTTGGGGCTGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CAA 90 bp GAGCGCAGTCTCTCATTCTCCAGCCCCAGCCTTGTGGGCTGTCCCGCTGGTGCTCATTGTGTCCAGGGTTaGCAGATCAGCACACCACTG +
Preference number: 5 (lower is better)
Translates to: ERSLSFSSPSLVGCPAGAHCVQG*QISTPL
Trigger: CAGTGGTGTGCTGATCTGCAAACCCTGGACACAATG...AGCACCAGCGGGACAGCCCACAAGGCTGGGGCTGGAGAATGAGAGACTGCGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS GCA 90 bp TGCAGGTCTGATCCCACATCTACCTCCCAGATCCCTTCCCTCCTCTaGATCCAGTATCCCTCGCTTATGAGCAGCCCACAGCCTGCTGGG +
Preference number: 5 (lower is better)
Translates to: CRSDPTSTSQIPSLL*IQYPSLMSSPQPAG
Trigger: CCCAGCAGGCTGTGGGCTGCTCATAAGCGAGGGATACTGGATGCAGAGGAGGGAAGGGATCTGGGAGGTAGATGTGGGATCAGACCTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478720.1
CDS CCA 90 bp TCCTCTGCCCGCTCGAGGGCCAGCTTTAGGGAGGAATGGTCTGCATaGCTCTCCGGGGTGTTCTCCAGAATACTTCTGATGAGCAGTGGG +
Preference number: 5 (lower is better)
Translates to: SSARSRASFREEWSA*LSGVFSRILLMSSG
Trigger: CCCACTGCTCATCAGAAGTATTCTGGAGAACACCCCGGAGAGCCATGCAGACCATTCCTCCCTAAAGCTGGCCCTCGAGCGGGCAGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS CCA 90 bp GAGCACAGCTCCTCTGCCCGCTCGAGGGCCAGCTTTAGGGAGGAATaGTCTGCATGGCTCTCCGGGGTGTTCTCCAGAATACTTCTGATG +
Preference number: 5 (lower is better)
Translates to: EHSSSARSRASFREE*SAWLSGVFSRILLM
Trigger: CATCAGAAGTATTCTGGAGAACACCCCGGAGAGCCATGCAGACCATTCCTCCCTAAAGCTGGCCCTCGAGCGGGCAGAGGAGCTGTGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CAA 90 bp GCGCAGTCTCTCATTCTCCAGCCCCAGCCTTGTGGGCTGTCCCGCTGGTGCTGTATTAAGGGAGGAAGGTaGGTCCCTGAAGTCGCAGAA +
Preference number: 5 (lower is better)
Translates to: AQSLILQPQPCGLSRWCCIKGGR*VPEVAE
Trigger: TTCTGCGACTTCAGGGACCAACCTTCCTCCCTTAAT...ACAGCACCAGCGGGACAGCCCACAAGGCTGGGGCTGGAGAATGAGAGACTGCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CAA 90 bp CCTCAGCCCCAAGAGAGCGCAGTCTCTCATTCTCCAGCCCCAGCCTTGTGGGCTAATGGCTGTCCAGCTTaGGCCATGTCAGTAAGGTGC +
Preference number: 5 (lower is better)
Translates to: PQPQESAVSHSPAPALWANGCPA*AMSVRC
Trigger: GCACCTTACTGACATGGCCAAAGCTGGACAGCCATT...AGCCCACAAGGCTGGGGCTGGAGAATGAGAGACTGCGCTCTCTTGGGGCTGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CAA 90 bp CCCAGCAGAGGTCACTGGCGTGGAATGGTTACAGCGTCACCAAACCACTCCACGCTGCTCCATCAAGGCTaGGCGTCGCTTTTCCAGCTC +
Preference number: 5 (lower is better)
Translates to: PSRGHWRGMVTASPNHSTLLHQG*ASLFQL
Trigger: GAGCTGGAAAAGCGACGCCAAGCCTTGATGGAGCAG...CGTGGAGTGGTTTGGTGACGCTGTAACCATTCCACGCCAGTGACCTCTGCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CAA 90 bp CCTCAGCCCCAAGAGAGCGCAGTCTCTCATTCTCCAGCCCCAGCCTTGTGGGCTCCCGTTGATCTCTCCTaGCCACCAATCAGGATCATC +
Preference number: 5 (lower is better)
Translates to: PQPQESAVSHSPAPALWAPVDLS*PPIRII
Trigger: GATGATCCTGATTGGTGGCAAGGAGAGATCAACGGG...AGCCCACAAGGCTGGGGCTGGAGAATGAGAGACTGCGCTCTCTTGGGGCTGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CAA 90 bp AGGCCCTTCCCATCCACTCTATCCCCGTCCTTCCTTGATGGGGCTCCTGCCACACATGCGAATGCCCTCTaGTTCTCCCGCTTCACTCTG +
Preference number: 5 (lower is better)
Translates to: RPFPSTLSPSFLDGAPATHANAL*FSRFTL
Trigger: CAGAGTGAAGCGGGAGAACAAGAGGGCATTCGCATG...TGTGGCAGGAGCCCCATCAAGGAAGGACGGGGATAGAGTGGATGGGAAGGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS CCA 90 bp TGCTGCCAAAGCGAGATGACACAGGCCTGTGTCACTTCCCTGAAGTaGCATGGGGTCTGCACACAGCTGAAGCCCCTAGATCTGGACTCC +
Preference number: 5 (lower is better)
Translates to: CCQSEMTQACVTSLK*HGVCTQLKPLDLDS
Trigger: GGAGTCCAGATCTAGGGGCTTCAGCTGTGTGCAGACCCCATGCCACTTCAGGGAAGTGACACAGGCCTGTGTCATCTCGCTTTGGCAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478720.1
CDS-3UTR CAA 90 bp CTCCTGCCACATCCAACGAAGCCATGCGAATGCCCTCTTGTTCTCCCGCTTCACCTGCTCCATCAAGGCTaGGCGTCGCTTTTCCAGCTC +
Preference number: 5 (lower is better)
Translates to: LLPHPTKPCECPLVLPLHLLHQG*ASLFQL
Trigger: GAGCTGGAAAAGCGACGCCAAGCCTTGATGGAGCAG...GTGAAGCGGGAGAACAAGAGGGCATTCGCATGGCTTCGTTGGATGTGGCAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS-3UTR CAA 90 bp GAGCGCAGTCTCTCATTCTCCAGCCCCAGCCTTGTGGGCTGTCCCGCTGGTGCTTTTGATGCTCCAGACTaGCTAGCACTCCCAAAACTC +
Preference number: 5 (lower is better)
Translates to: ERSLSFSSPSLVGCPAGAFDAPD*LALPKL
Trigger: GAGTTTTGGGAGTGCTAGCAAGTCTGGAGCATCAAA...AGCACCAGCGGGACAGCCCACAAGGCTGGGGCTGGAGAATGAGAGACTGCGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CAA 90 bp CTCTATCCCCGTCCTTCCTTGATGGGGCTCCTGCCACATCCAACGAAGCCATGCAGACCAGTCACCCCGTaGATCTCTCCTTGCCACCAA +
Preference number: 5 (lower is better)
Translates to: LYPRPSLMGLLPHPTKPCRPVTP*ISPCHQ
Trigger: TTGGTGGCAAGGAGAGATCAACGGGGTGACTGGTCT...GCATGGCTTCGTTGGATGTGGCAGGAGCCCCATCAAGGAAGGACGGGGATAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS-3UTR CAA 90 bp CTGCATGGTGCTCCCTCAGCCCCAAGAGAGCGCAGTCTCTCATTCTCCAGCCCCCACACCACTGTTGACTaGGATCTGAGTCTGTCGTCA +
Preference number: 5 (lower is better)
Translates to: LHGAPSAPRERSLSFSSPHTTVD*DLSLSS
Trigger: TGACGACAGACTCAGATCCAAGTCAACAGTGGTGTG...GGGGCTGGAGAATGAGAGACTGCGCTCTCTTGGGGCTGAGGGAGCACCATGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CAA 90 bp CCAAGAGAGCGCAGTCTCTCATTCTCCAGCCCCAGCCTTGTGGGCTGTCCCGCTCACACCACTGTTGACTaGGATCTGAGTCTGTCGTCA +
Preference number: 5 (lower is better)
Translates to: PRERSLSFSSPSLVGCPAHTTVD*DLSLSS
Trigger: TGACGACAGACTCAGATCCAAGTCAACAGTGGTGTG...AGCGGGACAGCCCACAAGGCTGGGGCTGGAGAATGAGAGACTGCGCTCTCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CAA 90 bp TGCATGGTGCTCCCTCAGCCCCAAGAGAGCGCAGTCTCTCATTCTCCAGCCCCAAACTCCCTCATTCACTaGAGAGCACAGCTCCTCTGC +
Preference number: 5 (lower is better)
Translates to: CMVLPQPQESAVSHSPAPNSLIH*RAQLLC
Trigger: GCAGAGGAGCTGTGCTCTCAAGTGAATGAGGGAGTT...TGGGGCTGGAGAATGAGAGACTGCGCTCTCTTGGGGCTGAGGGAGCACCATGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CAA 90 bp CCCAAGAGAGCGCAGTCTCTCATTCTCCAGCCCCAGCCTTGTGGGCTGTCCCGCAGAAGCAGGAAGTCATaGAAGAGGAATCCGTGCAGT +
Preference number: 5 (lower is better)
Translates to: PKRAQSLILQPQPCGLSRRSRKS*KRNPCS
Trigger: ACTGCACGGATTCCTCTTCAATGACTTCCTGCTTCT...GCGGGACAGCCCACAAGGCTGGGGCTGGAGAATGAGAGACTGCGCTCTCTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000427234.5
ENST00000622089.4
CDS TCA 90 bp AGTGGTGTTCACGTCGTGTGTGTAGGGAGTGATGGGTCAAAGACCTaGAACACATCTCAGGCCACCTCCTCCCCTGAGGAAGGCCACCCA +
Preference number: 5 (lower is better)
Translates to: SGVHVVCVGSDGSKT*NTSQATSSPEEGHP
Trigger: TGGGTGGCCTTCCTCAGGGGAGGAGGTGGCCTGAGATGTGTTTCAGGTCTTTGACCCATCACTCCCTACACACACGACGTGAACACCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478720.1
CDS CCA 90 bp CCAAAGCGAGATGACACAGGCCTGTGTCACTTCCCTGAAGTGGCATaGGGTCTGCACACAGCTGAAGCCCCTAGATCTGGACTCCAGGAT +
Preference number: 5 (lower is better)
Translates to: PKRDDTGLCHFPEVA*GLHTAEAPRSGLQD
Trigger: ATCCTGGAGTCCAGATCTAGGGGCTTCAGCTGTGTGCAGACCCCATGCCACTTCAGGGAAGTGACACAGGCCTGTGTCATCTCGCTTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478720.1
CDS-3UTR CAA 90 bp GAGCGCAGTCTCTCATTCTCCAGCCCCAGCCTTGTGGGCTGTCCCGCTGGTGCTTCCATCTTCCCATCCTaGTTTAGGTCTGATAAAGCC +
Preference number: 5 (lower is better)
Translates to: ERSLSFSSPSLVGCPAGASIFPS*FRSDKA
Trigger: GGCTTTATCAGACCTAAACAAGGATGGGAAGATGGA...AGCACCAGCGGGACAGCCCACAAGGCTGGGGCTGGAGAATGAGAGACTGCGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CAA 90 bp CTGCATGGTGCTCCCTCAGCCCCAAGAGAGCGCAGTCTCTCATTCTCCAGCCCCAACCACAGGCAACTGTaGGCCTTGAAGCTTCAGTTT +
Preference number: 5 (lower is better)
Translates to: LHGAPSAPRERSLSFSSPNHRQL*ALKLQF
Trigger: AAACTGAAGCTTCAAGGCCAACAGTTGCCTGTGGTT...GGGGCTGGAGAATGAGAGACTGCGCTCTCTTGGGGCTGAGGGAGCACCATGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CAA 90 bp GTGAAGCTGCATGGTGCTCCCTCAGCCCCAAGAGAGCGCAGTCTCTCATTCTCCAATGGCTGTCCAGCTTaGGCCATGTCAGTAAGGTGC +
Preference number: 5 (lower is better)
Translates to: VKLHGAPSAPRERSLSFSNGCPA*AMSVRC
Trigger: GCACCTTACTGACATGGCCAAAGCTGGACAGCCATT...GGAGAATGAGAGACTGCGCTCTCTTGGGGCTGAGGGAGCACCATGCAGCTTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CAA 90 bp CTCTATCCCCGTCCTTCCTTGATGGGGCTCCTGCCACATCCAACGAAGCCATGCAATGGCTGTCCAGCTTaGGCCATGTCAGTAAGGTGC +
Preference number: 5 (lower is better)
Translates to: LYPRPSLMGLLPHPTKPCNGCPA*AMSVRC
Trigger: GCACCTTACTGACATGGCCAAAGCTGGACAGCCATT...GCATGGCTTCGTTGGATGTGGCAGGAGCCCCATCAAGGAAGGACGGGGATAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS-3UTR CAA 90 bp GAGCGCAGTCTCTCATTCTCCAGCCCCAGCCTTGTGGGCTGTCCCGCTGGTGCTAGTAAGAGGAAGAGGTaGTTGAGACAGCTTAGCAGA +
Preference number: 5 (lower is better)
Translates to: ERSLSFSSPSLVGCPAGASKRKR*LRQLSR
Trigger: TCTGCTAAGCTGTCTCAACAACCTCTTCCTCTTACT...AGCACCAGCGGGACAGCCCACAAGGCTGGGGCTGGAGAATGAGAGACTGCGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355123.9
CDS-3UTR CAA 90 bp GCGCAGTCTCTCATTCTCCAGCCCCAGCCTTGTGGGCTGTCCCGCTGGTGCTGTCTTGCTTTGCTTTCCTaGCAGCCTCATCTTCTAGTT +
Preference number: 5 (lower is better)
Translates to: AQSLILQPQPCGLSRWCCLALLS*QPHLLV
Trigger: AACTAGAAGATGAGGCTGCAAGGAAAGCAAAGCAAG...ACAGCACCAGCGGGACAGCCCACAAGGCTGGGGCTGGAGAATGAGAGACTGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CAA 90 bp GTGAAGCTGCATGGTGCTCCCTCAGCCCCAAGAGAGCGCAGTCTCTCATTCTCCCCCGTTGATCTCTCCTaGCCACCAATCAGGATCATC +
Preference number: 5 (lower is better)
Translates to: VKLHGAPSAPRERSLSFSPVDLS*PPIRII
Trigger: GATGATCCTGATTGGTGGCAAGGAGAGATCAACGGG...GGAGAATGAGAGACTGCGCTCTCTTGGGGCTGAGGGAGCACCATGCAGCTTCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CAA 90 bp CTCTATCCCCGTCCTTCCTTGATGGGGCTCCTGCCACATCCAACGAAGCCATGCCCCGTTGATCTCTCCTaGCCACCAATCAGGATCATC +
Preference number: 5 (lower is better)
Translates to: LYPRPSLMGLLPHPTKPCPVDLS*PPIRII
Trigger: GATGATCCTGATTGGTGGCAAGGAGAGATCAACGGG...GCATGGCTTCGTTGGATGTGGCAGGAGCCCCATCAAGGAAGGACGGGGATAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS-3UTR CAA 90 bp TGCACGAGTAGACGCTATTTCAGTATCAGGCCGCGCCAAGTGTCGAGGCTGCAGAGACCAGTCACCCCGTaGATCTCTCCTTGCCACCAA +
Preference number: 5 (lower is better)
Translates to: CTSRRYFSIRPRQVSRLQRPVTP*ISPCHQ
Trigger: TTGGTGGCAAGGAGAGATCAACGGGGTGACTGGTCT...CTGCAGCCTCGACACTTGGCGCGGCCTGATACTGAAATAGCGTCTACTCGTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CAA 90 bp GAAGCTGCATGGTGCTCCCTCAGCCCCAAGAGAGCGCAGTCTCTCATTCTCCAGAACTCCCTCATTCACTaGAGAGCACAGCTCCTCTGC +
Preference number: 5 (lower is better)
Translates to: EAAWCSLSPKRAQSLILQNSLIH*RAQLLC
Trigger: GCAGAGGAGCTGTGCTCTCAAGTGAATGAGGGAGTT...CTGGAGAATGAGAGACTGCGCTCTCTTGGGGCTGAGGGAGCACCATGCAGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CAA 90 bp CTGCATGGTGCTCCCTCAGCCCCAAGAGAGCGCAGTCTCTCATTCTCCAGCCCCAGAAGCAGGAAGTCATaGAAGAGGAATCCGTGCAGT +
Preference number: 5 (lower is better)
Translates to: LHGAPSAPRERSLSFSSPRSRKS*KRNPCS
Trigger: ACTGCACGGATTCCTCTTCAATGACTTCCTGCTTCT...GGGGCTGGAGAATGAGAGACTGCGCTCTCTTGGGGCTGAGGGAGCACCATGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000427234.5
ENST00000622089.4
CDS-3UTR CAA 90 bp GAAGCTGCATGGTGCTCCCTCAGCCCCAAGAGAGCGCAGTCTCTCATTCTCCAGCTTTTGGGAGCGGGCTaGGTAAGCTTTCTCACGCTT +
Preference number: 5 (lower is better)
Translates to: EAAWCSLSPKRAQSLILQLLGAG*VSFLTL
Trigger: AAGCGTGAGAAAGCTTACCAAGCCCGCTCCCAAAAG...CTGGAGAATGAGAGACTGCGCTCTCTTGGGGCTGAGGGAGCACCATGCAGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000427234.5
ENST00000622089.4
CDS-3UTR CAA 90 bp GCGCAGTCTCTCATTCTCCAGCCCCAGCCTTGTGGGCTGTCCCGCTGGTGCTGTCAGTTAAAATTCCACTaGGGATTGAGTGTGTCCTGG +
Preference number: 5 (lower is better)
Translates to: AQSLILQPQPCGLSRWCCQLKFH*GLSVSW
Trigger: CCAGGACACACTCAATCCCAAGTGGAATTTTAACTG...ACAGCACCAGCGGGACAGCCCACAAGGCTGGGGCTGGAGAATGAGAGACTGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000427234.5
ENST00000622089.4
CDS TCA 90 bp CTGAGAATGCTCCAGGAGTGGTGTTCACGTCGTGTGTGTAGGGAGTaGTGGGTCAAAGACCTGAAACACATCTCAGGCCACCTCCTCCCC +
Preference number: 5 (lower is better)
Translates to: LRMLQEWCSRRVCRE*WVKDLKHISGHLLP
Trigger: GGGGAGGAGGTGGCCTGAGATGTGTTTCAGGTCTTTGACCCATCACTCCCTACACACACGACGTGAACACCACTCCTGGAGCATTCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478720.1
CDS GCA 90 bp AGGCTGTGTTGCCTGCTAGGAAGCCCCTGCTTGCTCTTTCTGCCCTaGCTGCTTTCTCTGCCCGTCAGCATCCTACTCATCCTTCAAGAT +
Preference number: 5 (lower is better)
Translates to: RLCCLLGSPCLLFLP*LLSLPVSILLILQD
Trigger: ATCTTGAAGGATGAGTAGGATGCTGACGGGCAGAGAAAGCAGGCAGGGCAGAAAGAGCAAGCAGGGGCTTCCTAGCAGGCAACACAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478720.1
CDS-3UTR CAA 90 bp GTGCTCCCTCAGCCCCAAGAGAGCGCAGTCTCTCATTCTCCAGCCCCAGCCTTGTCCATCTTCCCATCCTaGTTTAGGTCTGATAAAGCC +
Preference number: 5 (lower is better)
Translates to: VLPQPQESAVSHSPAPALSIFPS*FRSDKA
Trigger: GGCTTTATCAGACCTAAACAAGGATGGGAAGATGGA...CAAGGCTGGGGCTGGAGAATGAGAGACTGCGCTCTCTTGGGGCTGAGGGAGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CAA 90 bp TGCATGGTGCTCCCTCAGCCCCAAGAGAGCGCAGTCTCTCATTCTCCAGCCCCAAGCTATGGAGAACTCTaGCTGATCCATCTTCCCATC +
Preference number: 5 (lower is better)
Translates to: CMVLPQPQESAVSHSPAPSYGEL*LIHLPI
Trigger: GATGGGAAGATGGATCAGCAAGAGTTCTCCATAGCT...TGGGGCTGGAGAATGAGAGACTGCGCTCTCTTGGGGCTGAGGGAGCACCATGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CAA 90 bp GTGAAGCTGCATGGTGCTCCCTCAGCCCCAAGAGAGCGCAGTCTCTCATTCTCCATTAAGGGAGGAAGGTaGGTCCCTGAAGTCGCAGAA +
Preference number: 5 (lower is better)
Translates to: VKLHGAPSAPRERSLSFSIKGGR*VPEVAE
Trigger: TTCTGCGACTTCAGGGACCAACCTTCCTCCCTTAAT...GGAGAATGAGAGACTGCGCTCTCTTGGGGCTGAGGGAGCACCATGCAGCTTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CAA 90 bp CCCAGCAGAGGTCACTGGCGTGGAATGGTTACAGCGTCACCAAACCACTCCACGCCTTTCTTCCTCTCGTaGTCTCTCCAATTCCCGTTG +
Preference number: 5 (lower is better)
Translates to: PSRGHWRGMVTASPNHSTPFFLS*SLQFPL
Trigger: CAACGGGAATTGGAGAGACAACGAGAGGAAGAAAGG...CGTGGAGTGGTTTGGTGACGCTGTAACCATTCCACGCCAGTGACCTCTGCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CAA 90 bp GGGGCTCCTGCCACATCCAACGAAGCCATGCGAATGCCCTCTTGTTCTCCCGCTTTTGATGCTCCAGACTaGCTAGCACTCCCAAAACTC +
Preference number: 5 (lower is better)
Translates to: GAPATSNEAMRMPSCSPAFDAPD*LALPKL
Trigger: GAGTTTTGGGAGTGCTAGCAAGTCTGGAGCATCAAA...AGCGGGAGAACAAGAGGGCATTCGCATGGCTTCGTTGGATGTGGCAGGAGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS-3UTR CAA 90 bp TGCACGAGTAGACGCTATTTCAGTATCAGGCCGCGCCAAGTGTCGAGGCTGCAGCATTGTGTCCAGGGTTaGCAGATCAGCACACCACTG +
Preference number: 5 (lower is better)
Translates to: CTSRRYFSIRPRQVSRLQHCVQG*QISTPL
Trigger: CAGTGGTGTGCTGATCTGCAAACCCTGGACACAATG...CTGCAGCCTCGACACTTGGCGCGGCCTGATACTGAAATAGCGTCTACTCGTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CAA 90 bp AGAGGTCACTGGCGTGGAATGGTTACAGCGTCACCAAACCACTCCACGGTGGACCTTTTGGGAGCGGGCTaGGTAAGCTTTCTCACGCTT +
Preference number: 5 (lower is better)
Translates to: RGHWRGMVTASPNHSTVDLLGAG*VSFLTL
Trigger: AAGCGTGAGAAAGCTTACCAAGCCCGCTCCCAAAAG...GTCCACCGTGGAGTGGTTTGGTGACGCTGTAACCATTCCACGCCAGTGACCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CAA 90 bp AGCGCAGTCTCTCATTCTCCAGCCCCAGCCTTGTGGGCTGTCCCGCTGGTGCTGGAGACACAGCACGTCTaGGTAGAGATCCTTAATAAA +
Preference number: 5 (lower is better)
Translates to: SAVSHSPAPALWAVPLVLETQHV*VEILNK
Trigger: TTTATTAAGGATCTCTACCAAGACGTGCTGTGTCTC...CAGCACCAGCGGGACAGCCCACAAGGCTGGGGCTGGAGAATGAGAGACTGCGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000427234.5
ENST00000622089.4
CDS-3UTR CAA 90 bp AGAGGTCACTGGCGTGGAATGGTTACAGCGTCACCAAACCACTCCACGGTGGACCGGGTCATAGGGCCTTaGCTTTCCTGTTCTGTTCGA +
Preference number: 5 (lower is better)
Translates to: RGHWRGMVTASPNHSTVDRVIGP*LSCSVR
Trigger: TCGAACAGAACAGGAAAGCAAAGGCCCTATGACCCG...GTCCACCGTGGAGTGGTTTGGTGACGCTGTAACCATTCCACGCCAGTGACCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CAA 90 bp CCAAGAGAGCGCAGTCTCTCATTCTCCAGCCCCAGCCTTGTGGGCTGTCCCGCTCTACAGGAGAGTTTTTaGCTCAAAAAGCTGCAGGTC +
Preference number: 5 (lower is better)
Translates to: PRERSLSFSSPSLVGCPALQESF*LKKLQV
Trigger: GACCTGCAGCTTTTTGAGCAAAAAACTCTCCTGTAG...AGCGGGACAGCCCACAAGGCTGGGGCTGGAGAATGAGAGACTGCGCTCTCTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000427234.5
ENST00000622089.4
CDS-3UTR CAA 90 bp GCCCCAGCCTTGTGGGCTGTCCCGCTGGTGCTGTCCTTTAGAACCCCTACAGGACTACAGGAGAGTTTTTaGCTCAAAAAGCTGCAGGTC +
Preference number: 5 (lower is better)
Translates to: APALWAVPLVLSFRTPTGLQESF*LKKLQV
Trigger: GACCTGCAGCTTTTTGAGCAAAAAACTCTCCTGTAG...TCCTGTAGGGGTTCTAAAGGACAGCACCAGCGGGACAGCCCACAAGGCTGGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000427234.5
CDS-3UTR CAA 90 bp GAGCGCAGTCTCTCATTCTCCAGCCCCAGCCTTGTGGGCTGTCCCGCTGGTGCTACTGTACTATGGGGTTaGGTTTCTTTATGGGAAAGG +
Preference number: 5 (lower is better)
Translates to: ERSLSFSSPSLVGCPAGATVLWG*VSLWER
Trigger: CCTTTCCCATAAAGAAACCAAACCCCATAGTACAGT...AGCACCAGCGGGACAGCCCACAAGGCTGGGGCTGGAGAATGAGAGACTGCGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000427234.5
ENST00000622089.4
CDS-3UTR CAA 90 bp CTCTATCCCCGTCCTTCCTTGATGGGGCTCCTGCCACATCCAACGAAGCCATGCAGCTATGGAGAACTCTaGCTGATCCATCTTCCCATC +
Preference number: 5 (lower is better)
Translates to: LYPRPSLMGLLPHPTKPCSYGEL*LIHLPI
Trigger: GATGGGAAGATGGATCAGCAAGAGTTCTCCATAGCT...GCATGGCTTCGTTGGATGTGGCAGGAGCCCCATCAAGGAAGGACGGGGATAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS-3UTR CAA 90 bp GACCCAGCAGAGGTCACTGGCGTGGAATGGTTACAGCGTCACCAAACCACTCCAATTAAGGGAGGAAGGTaGGTCCCTGAAGTCGCAGAA +
Preference number: 5 (lower is better)
Translates to: DPAEVTGVEWLQRHQTTPIKGGR*VPEVAE
Trigger: TTCTGCGACTTCAGGGACCAACCTTCCTCCCTTAAT...TGGAGTGGTTTGGTGACGCTGTAACCATTCCACGCCAGTGACCTCTGCTGGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CAA 90 bp GTGCTCCCTCAGCCCCAAGAGAGCGCAGTCTCTCATTCTCCAGCCCCAGCCTTGACCCATGAGGCAATGTaGAAGAAGAATAAGGAATGG +
Preference number: 5 (lower is better)
Translates to: VLPQPQESAVSHSPAPALTHEAM*KKNKEW
Trigger: CCATTCCTTATTCTTCTTCAACATTGCCTCATGGGT...CAAGGCTGGGGCTGGAGAATGAGAGACTGCGCTCTCTTGGGGCTGAGGGAGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CAA 90 bp ACAGCGTCACCAAACCACTCCACGGTGGACACATTCAACCGAGCGGTAACATCTTCTGAGGTCCCAGTCTaGGGTGAGTTCCCTGAGAGT +
Preference number: 5 (lower is better)
Translates to: TASPNHSTVDTFNRAVTSSEVPV*GEFPES
Trigger: ACTCTCAGGGAACTCACCCAAGACTGGGACCTCAGA...AGATGTTACCGCTCGGTTGAATGTGTCCACCGTGGAGTGGTTTGGTGACGCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CAA 90 bp AGCGCAGTCTCTCATTCTCCAGCCCCAGCCTTGTGGGCTGTCCCGCTGGTGCTGGAGTTTGAGAAAGATTaGACTGAAGAAGGGCATTTC +
Preference number: 5 (lower is better)
Translates to: SAVSHSPAPALWAVPLVLEFEKD*TEEGHF
Trigger: GAAATGCCCTTCTTCAGTCAAATCTTTCTCAAACTC...CAGCACCAGCGGGACAGCCCACAAGGCTGGGGCTGGAGAATGAGAGACTGCGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CAA 90 bp TGCATGGTGCTCCCTCAGCCCCAAGAGAGCGCAGTCTCTCATTCTCCAGCCCCAGTTCAAGTTCCTGTTTaGCTGCCTCTCGTCTTTCTA +
Preference number: 5 (lower is better)
Translates to: CMVLPQPQESAVSHSPAPVQVPV*LPLVFL
Trigger: TAGAAAGACGAGAGGCAGCAAAACAGGAACTTGAAC...TGGGGCTGGAGAATGAGAGACTGCGCTCTCTTGGGGCTGAGGGAGCACCATGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CAA 90 bp AGCGCAGTCTCTCATTCTCCAGCCCCAGCCTTGTGGGCTGTCCCGCTGGTGCTGTTGTTCTCTATTCTTTaGATTGAGAAGCTCCTGTCG +
Preference number: 5 (lower is better)
Translates to: SAVSHSPAPALWAVPLVLLFSIL*IEKLLS
Trigger: CGACAGGAGCTTCTCAATCAAAAGAATAGAGAACAA...CAGCACCAGCGGGACAGCCCACAAGGCTGGGGCTGGAGAATGAGAGACTGCGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CAA 90 bp CCAAGAGAGCGCAGTCTCTCATTCTCCAGCCCCAGCCTTGTGGGCTGTCCCGCTCTCAGTCTTTTGAGTTaGCTTTTTGAGTCGGACATC +
Preference number: 5 (lower is better)
Translates to: PRERSLSFSSPSLVGCPALSLLS*LFESDI
Trigger: GATGTCCGACTCAAAAAGCAAACTCAAAAGACTGAG...AGCGGGACAGCCCACAAGGCTGGGGCTGGAGAATGAGAGACTGCGCTCTCTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CAA 90 bp TGCATGGTGCTCCCTCAGCCCCAAGAGAGCGCAGTCTCTCATTCTCCAGCCCCACTTGCTTTGCTTTCCTaGCAGCCTCATCTTCTAGTT +
Preference number: 5 (lower is better)
Translates to: CMVLPQPQESAVSHSPAPLALLS*QPHLLV
Trigger: AACTAGAAGATGAGGCTGCAAGGAAAGCAAAGCAAG...TGGGGCTGGAGAATGAGAGACTGCGCTCTCTTGGGGCTGAGGGAGCACCATGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CAA 90 bp AGCGCAGTCTCTCATTCTCCAGCCCCAGCCTTGTGGGCTGTCCCGCTGGTGCTGGAAGTAAGGCCTTCTTaGGAGATACAGCTTTTTCAT +
Preference number: 5 (lower is better)
Translates to: SAVSHSPAPALWAVPLVLEVRPS*EIQLFH
Trigger: ATGAAAAAGCTGTATCTCCAAAGAAGGCCTTACTTC...CAGCACCAGCGGGACAGCCCACAAGGCTGGGGCTGGAGAATGAGAGACTGCGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CAA 90 bp GAGCGCAGTCTCTCATTCTCCAGCCCCAGCCTTGTGGGCTGTCCCGCTGGTGCTAAACCACCAATTTTCTaGCTGCTCCAAGACAGTAAT +
Preference number: 5 (lower is better)
Translates to: ERSLSFSSPSLVGCPAGAKPPIF*LLQDSN
Trigger: ATTACTGTCTTGGAGCAGCAAGAAAATTGGTGGTTT...AGCACCAGCGGGACAGCCCACAAGGCTGGGGCTGGAGAATGAGAGACTGCGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CAA 90 bp GCGCAGTCTCTCATTCTCCAGCCCCAGCCTTGTGGGCTGTCCCGCTGGTGCTGTAAACCACCAATTTTCTaGCTGCTCCAAGACAGTAAT +
Preference number: 5 (lower is better)
Translates to: AQSLILQPQPCGLSRWCCKPPIF*LLQDSN
Trigger: ATTACTGTCTTGGAGCAGCAAGAAAATTGGTGGTTT...ACAGCACCAGCGGGACAGCCCACAAGGCTGGGGCTGGAGAATGAGAGACTGCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CAA 90 bp GAAGCTGCATGGTGCTCCCTCAGCCCCAAGAGAGCGCAGTCTCTCATTCTCCAGTTTGATGCTCCAGACTaGCTAGCACTCCCAAAACTC +
Preference number: 5 (lower is better)
Translates to: EAAWCSLSPKRAQSLILQFDAPD*LALPKL
Trigger: GAGTTTTGGGAGTGCTAGCAAGTCTGGAGCATCAAA...CTGGAGAATGAGAGACTGCGCTCTCTTGGGGCTGAGGGAGCACCATGCAGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CAA 90 bp GCAGAGGTCACTGGCGTGGAATGGTTACAGCGTCACCAAACCACTCCACGGTGGTGGTGCAAGGCTAAGTaGTTCAGAACCAGAAGCAAC +
Preference number: 5 (lower is better)
Translates to: AEVTGVEWLQRHQTTPRWWCKAK*FRTRSN
Trigger: GTTGCTTCTGGTTCTGAACAACTTAGCCTTGCACCA...CCACCGTGGAGTGGTTTGGTGACGCTGTAACCATTCCACGCCAGTGACCTCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CAA 90 bp GTGCTCCCTCAGCCCCAAGAGAGCGCAGTCTCTCATTCTCCAGCCCCAGCCTTGTTAATGAGTTGTCCCTaGGAGAAACTGAGCTCATCT +
Preference number: 5 (lower is better)
Translates to: VLPQPQESAVSHSPAPALLMSCP*EKLSSS
Trigger: AGATGAGCTCAGTTTCTCCAAGGGACAACTCATTAA...CAAGGCTGGGGCTGGAGAATGAGAGACTGCGCTCTCTTGGGGCTGAGGGAGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CAA 90 bp CCTCAGCCCCAAGAGAGCGCAGTCTCTCATTCTCCAGCCCCAGCCTTGTGGGCTTTAATGAGTTGTCCCTaGGAGAAACTGAGCTCATCT +
Preference number: 5 (lower is better)
Translates to: PQPQESAVSHSPAPALWALMSCP*EKLSSS
Trigger: AGATGAGCTCAGTTTCTCCAAGGGACAACTCATTAA...AGCCCACAAGGCTGGGGCTGGAGAATGAGAGACTGCGCTCTCTTGGGGCTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CAA 90 bp CCCAGCAGAGGTCACTGGCGTGGAATGGTTACAGCGTCACCAAACCACTCCACGTCTCAATTGGCTGCATaGTGTCCAGGGTTTGCAGAT +
Preference number: 5 (lower is better)
Translates to: PSRGHWRGMVTASPNHSTSQLAA*CPGFAD
Trigger: ATCTGCAAACCCTGGACACAATGCAGCCAATTGAGA...CGTGGAGTGGTTTGGTGACGCTGTAACCATTCCACGCCAGTGACCTCTGCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CAA 90 bp GTCACCAAACCACTCCACGGTGGACACATTCAACCGAGCGGTAACATCTGGTGGAACTCCCTCATTCACTaGAGAGCACAGCTCCTCTGC +
Preference number: 5 (lower is better)
Translates to: VTKPLHGGHIQPSGNIWWNSLIH*RAQLLC
Trigger: GCAGAGGAGCTGTGCTCTCAAGTGAATGAGGGAGTT...CCACCAGATGTTACCGCTCGGTTGAATGTGTCCACCGTGGAGTGGTTTGGTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CAA 90 bp GTGCTCCCTCAGCCCCAAGAGAGCGCAGTCTCTCATTCTCCAGCCCCAGCCTTGGAGACACAGCACGTCTaGGTAGAGATCCTTAATAAA +
Preference number: 5 (lower is better)
Translates to: VLPQPQESAVSHSPAPALETQHV*VEILNK
Trigger: TTTATTAAGGATCTCTACCAAGACGTGCTGTGTCTC...CAAGGCTGGGGCTGGAGAATGAGAGACTGCGCTCTCTTGGGGCTGAGGGAGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000427234.5
ENST00000622089.4
CDS-3UTR CAA 90 bp GCCCCAGCCTTGTGGGCTGTCCCGCTGGTGCTGTCCTTTAGAACCCCTACAGGAGAGACACAGCACGTCTaGGTAGAGATCCTTAATAAA +
Preference number: 5 (lower is better)
Translates to: APALWAVPLVLSFRTPTGETQHV*VEILNK
Trigger: TTTATTAAGGATCTCTACCAAGACGTGCTGTGTCTC...TCCTGTAGGGGTTCTAAAGGACAGCACCAGCGGGACAGCCCACAAGGCTGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427234.5
CDS-3UTR CAA 90 bp AGCGCAGTCTCTCATTCTCCAGCCCCAGCCTTGTGGGCTGTCCCGCTGGTGCTGGTTCTGTTCGAATTTTaGCCACTGGAATTTCAGTAC +
Preference number: 5 (lower is better)
Translates to: SAVSHSPAPALWAVPLVLVLFEF*PLEFQY
Trigger: GTACTGAAATTCCAGTGGCAAAAATTCGAACAGAAC...CAGCACCAGCGGGACAGCCCACAAGGCTGGGGCTGGAGAATGAGAGACTGCGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000427234.5
ENST00000622089.4
CDS TCA 90 bp TTTCTCTGCCCGTCAGCATCCTACTCATCCTTCAAGATGCAGGTCTaGTCCCACATCTACCTCCCAGATCCCTTCCCTCCTCTGCATCCA +
Preference number: 5 (lower is better)
Translates to: FLCPSASYSSFKMQV*SHIYLPDPFPPLHP
Trigger: TGGATGCAGAGGAGGGAAGGGATCTGGGAGGTAGATGTGGGATCAGACCTGCATCTTGAAGGATGAGTAGGATGCTGACGGGCAGAGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478720.1
CDS-3UTR CAA 90 bp AGAGGTCACTGGCGTGGAATGGTTACAGCGTCACCAAACCACTCCACGGTGGACAACCACAGGCAACTGTaGGCCTTGAAGCTTCAGTTT +
Preference number: 5 (lower is better)
Translates to: RGHWRGMVTASPNHSTVDNHRQL*ALKLQF
Trigger: AAACTGAAGCTTCAAGGCCAACAGTTGCCTGTGGTT...GTCCACCGTGGAGTGGTTTGGTGACGCTGTAACCATTCCACGCCAGTGACCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CAA 90 bp GTGAAGCTGCATGGTGCTCCCTCAGCCCCAAGAGAGCGCAGTCTCTCATTCTCCAGAAAACATAGGGGGTaGCTTCATAATAGGAGGGAG +
Preference number: 5 (lower is better)
Translates to: VKLHGAPSAPRERSLSFSRKHRG*LHNRRE
Trigger: CTCCCTCCTATTATGAAGCAACCCCCTATGTTTTCT...GGAGAATGAGAGACTGCGCTCTCTTGGGGCTGAGGGAGCACCATGCAGCTTCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CAA 90 bp TGCATGGTGCTCCCTCAGCCCCAAGAGAGCGCAGTCTCTCATTCTCCAGCCCCAACCCATGAGGCAATGTaGAAGAAGAATAAGGAATGG +
Preference number: 5 (lower is better)
Translates to: CMVLPQPQESAVSHSPAPTHEAM*KKNKEW
Trigger: CCATTCCTTATTCTTCTTCAACATTGCCTCATGGGT...TGGGGCTGGAGAATGAGAGACTGCGCTCTCTTGGGGCTGAGGGAGCACCATGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CAA 90 bp GTGAAGCTGCATGGTGCTCCCTCAGCCCCAAGAGAGCGCAGTCTCTCATTCTCCGTTCAAGTTCCTGTTTaGCTGCCTCTCGTCTTTCTA +
Preference number: 5 (lower is better)
Translates to: VKLHGAPSAPRERSLSFSVQVPV*LPLVFL
Trigger: TAGAAAGACGAGAGGCAGCAAAACAGGAACTTGAAC...GGAGAATGAGAGACTGCGCTCTCTTGGGGCTGAGGGAGCACCATGCAGCTTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CAA 90 bp CTGCATGGTGCTCCCTCAGCCCCAAGAGAGCGCAGTCTCTCATTCTCCAGCCCCTTGTTCTCTATTCTTTaGATTGAGAAGCTCCTGTCG +
Preference number: 5 (lower is better)
Translates to: LHGAPSAPRERSLSFSSPLFSIL*IEKLLS
Trigger: CGACAGGAGCTTCTCAATCAAAAGAATAGAGAACAA...GGGGCTGGAGAATGAGAGACTGCGCTCTCTTGGGGCTGAGGGAGCACCATGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CAA 90 bp CTCTATCCCCGTCCTTCCTTGATGGGGCTCCTGCCACATCCAACGAAGCCATGCATCCTTATCCTTACGTaGTTTCTCCTCAGCTTTCCG +
Preference number: 5 (lower is better)
Translates to: LYPRPSLMGLLPHPTKPCILILT*FLLSFP
Trigger: CGGAAAGCTGAGGAGAAACAACGTAAGGATAAGGAT...GCATGGCTTCGTTGGATGTGGCAGGAGCCCCATCAAGGAAGGACGGGGATAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS-3UTR CAA 90 bp CTTCCCCTCCTGAGTGGCTGTGACCCAGCAGAGGTCACTGGCGTGGAATGGTTACTGATGCTGGTTGATTaGAAGAAAGTGGTTCAGAGG +
Preference number: 5 (lower is better)
Translates to: LPLLSGCDPAEVTGVEWLLMLVD*KKVVQR
Trigger: CCTCTGAACCACTTTCTTCAAATCAACCAGCATCAG...TAACCATTCCACGCCAGTGACCTCTGCTGGGTCACAGCCACTCAGGAGGGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CAA 90 bp GCAGAGGTCACTGGCGTGGAATGGTTACAGCGTCACCAAACCACTCCACGGTGGAGTGGTTATCTTTCTTaGCAGTCCAGGAACAAAGGG +
Preference number: 5 (lower is better)
Translates to: AEVTGVEWLQRHQTTPRWSGYLS*QSRNKG
Trigger: CCCTTTGTTCCTGGACTGCAAAGAAAGATAACCACT...CCACCGTGGAGTGGTTTGGTGACGCTGTAACCATTCCACGCCAGTGACCTCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CAA 90 bp GCGCAGTCTCTCATTCTCCAGCCCCAGCCTTGTGGGCTGTCCCGCTGGTGCTGTCTTGCCACCACCCACTaGTATTTTTCTTTAGAATTA +
Preference number: 5 (lower is better)
Translates to: AQSLILQPQPCGLSRWCCLATTH*YFSLEL
Trigger: TAATTCTAAAGAAAAATACAAGTGGGTGGTGGCAAG...ACAGCACCAGCGGGACAGCCCACAAGGCTGGGGCTGGAGAATGAGAGACTGCGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CAA 90 bp ACTGGCGTGGAATGGTTACAGCGTCACCAAACCACTCCACGGTGGACACATTCACATTGTGTCCAGGGTTaGCAGATCAGCACACCACTG +
Preference number: 5 (lower is better)
Translates to: TGVEWLQRHQTTPRWTHSHCVQG*QISTPL
Trigger: CAGTGGTGTGCTGATCTGCAAACCCTGGACACAATG...TGAATGTGTCCACCGTGGAGTGGTTTGGTGACGCTGTAACCATTCCACGCCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CAA 90 bp ACTGGCGTGGAATGGTTACAGCGTCACCAAACCACTCCACGGTGGACACATTCACTTTTGGGAGCGGGCTaGGTAAGCTTTCTCACGCTT +
Preference number: 5 (lower is better)
Translates to: TGVEWLQRHQTTPRWTHSLLGAG*VSFLTL
Trigger: AAGCGTGAGAAAGCTTACCAAGCCCGCTCCCAAAAG...TGAATGTGTCCACCGTGGAGTGGTTTGGTGACGCTGTAACCATTCCACGCCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CAA 90 bp CTTCCCCTCCTGAGTGGCTGTGACCCAGCAGAGGTCACTGGCGTGGAATGGTTACAGTTAAAATTCCACTaGGGATTGAGTGTGTCCTGG +
Preference number: 5 (lower is better)
Translates to: LPLLSGCDPAEVTGVEWLQLKFH*GLSVSW
Trigger: CCAGGACACACTCAATCCCAAGTGGAATTTTAACTG...TAACCATTCCACGCCAGTGACCTCTGCTGGGTCACAGCCACTCAGGAGGGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CAA 90 bp CCCAGCAGAGGTCACTGGCGTGGAATGGTTACAGCGTCACCAAACCACTCCACGCTACAGGAGAGTTTTTaGCTCAAAAAGCTGCAGGTC +
Preference number: 5 (lower is better)
Translates to: PSRGHWRGMVTASPNHSTLQESF*LKKLQV
Trigger: GACCTGCAGCTTTTTGAGCAAAAAACTCTCCTGTAG...CGTGGAGTGGTTTGGTGACGCTGTAACCATTCCACGCCAGTGACCTCTGCTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CAA 90 bp GAGCGCAGTCTCTCATTCTCCAGCCCCAGCCTTGTGGGCTGTCCCGCTGGTGCTTTATGGGAAAGGTGTTaGCATAGATTGCTAGCTATT +
Preference number: 5 (lower is better)
Translates to: ERSLSFSSPSLVGCPAGALWERC*HRLLAI
Trigger: AATAGCTAGCAATCTATGCAAACACCTTTCCCATAA...AGCACCAGCGGGACAGCCCACAAGGCTGGGGCTGGAGAATGAGAGACTGCGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000427234.5
ENST00000622089.4
CDS-3UTR CAA 90 bp CCAAGAGAGCGCAGTCTCTCATTCTCCAGCCCCAGCCTTGTGGGCTGTCCCGCTCTGAAAATGGAAACCTaGGCATCTAAACAAACAGAG +
Preference number: 5 (lower is better)
Translates to: PRERSLSFSSPSLVGCPALKMET*ASKQTE
Trigger: CTCTGTTTGTTTAGATGCCAAGGTTTCCATTTTCAG...AGCGGGACAGCCCACAAGGCTGGGGCTGGAGAATGAGAGACTGCGCTCTCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000427234.5
ENST00000622089.4
CDS-3UTR CAA 90 bp TCAATCTCAAGCATTATCCGGCAGGCAGAGACAGCATTTGGAGGATGTGAGAGCTATCCCCGTCCTTCCTaGATGGGGCTCCTGCCACAT +
Preference number: 5 (lower is better)
Translates to: SISSIIRQAETAFGGCESYPRPS*MGLLPH
Trigger: ATGTGGCAGGAGCCCCATCAAGGAAGGACGGGGATA...GCTCTCACATCCTCCAAATGCTGTCTCTGCCTGCCGGATAATGCTTGAGATTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS-3UTR CAA 90 bp TTTCACTGTTTCACAGTTCCTCCAGAGATACCAGTTTATGAAAATGTCAGATGTGCCACTGCAGCTGGCTaGGTCGTCAGGCCGCCGCCC +
Preference number: 5 (lower is better)
Translates to: FHCFTVPPEIPVYENVRCATAAG*VVRPPP
Trigger: GGGCGGCGGCCTGACGACCAAGCCAGCTGCAGTGGC...ACATCTGACATTTTCATAAACTGGTATCTCTGGAGGAACTGTGAAACAGTGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS-3UTR CAA 90 bp CTCTATCCCCGTCCTTCCTTGATGGGGCTCCTGCCACATCCAACGAAGCCATGCACCCATGAGGCAATGTaGAAGAAGAATAAGGAATGG +
Preference number: 5 (lower is better)
Translates to: LYPRPSLMGLLPHPTKPCTHEAM*KKNKEW
Trigger: CCATTCCTTATTCTTCTTCAACATTGCCTCATGGGT...GCATGGCTTCGTTGGATGTGGCAGGAGCCCCATCAAGGAAGGACGGGGATAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS-3UTR CAA 90 bp CTTCCCCTCCTGAGTGGCTGTGACCCAGCAGAGGTCACTGGCGTGGAATGGTTACTCAGTCTTTTGAGTTaGCTTTTTGAGTCGGACATC +
Preference number: 5 (lower is better)
Translates to: LPLLSGCDPAEVTGVEWLLSLLS*LFESDI
Trigger: GATGTCCGACTCAAAAAGCAAACTCAAAAGACTGAG...TAACCATTCCACGCCAGTGACCTCTGCTGGGTCACAGCCACTCAGGAGGGGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CAA 90 bp GAAGCTGCATGGTGCTCCCTCAGCCCCAAGAGAGCGCAGTCTCTCATTCTCCAGTTCCAGCTCAGTCTTTaGAGTTTGCTTTTTGAGTCG +
Preference number: 5 (lower is better)
Translates to: EAAWCSLSPKRAQSLILQFQLSL*SLLFES
Trigger: CGACTCAAAAAGCAAACTCAAAAGACTGAGCTGGAA...CTGGAGAATGAGAGACTGCGCTCTCTTGGGGCTGAGGGAGCACCATGCAGCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CAA 90 bp AGAGGTCACTGGCGTGGAATGGTTACAGCGTCACCAAACCACTCCACGGTGGACCTGATGCTGGTTGATTaGAAGAAAGTGGTTCAGAGG +
Preference number: 5 (lower is better)
Translates to: RGHWRGMVTASPNHSTVDLMLVD*KKVVQR
Trigger: CCTCTGAACCACTTTCTTCAAATCAACCAGCATCAG...GTCCACCGTGGAGTGGTTTGGTGACGCTGTAACCATTCCACGCCAGTGACCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CAA 90 bp GACCCAGCAGAGGTCACTGGCGTGGAATGGTTACAGCGTCACCAAACCACTCCAAGTGGTTATCTTTCTTaGCAGTCCAGGAACAAAGGG +
Preference number: 5 (lower is better)
Translates to: DPAEVTGVEWLQRHQTTPSGYLS*QSRNKG
Trigger: CCCTTTGTTCCTGGACTGCAAAGAAAGATAACCACT...TGGAGTGGTTTGGTGACGCTGTAACCATTCCACGCCAGTGACCTCTGCTGGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CAA 90 bp AGAGGTCACTGGCGTGGAATGGTTACAGCGTCACCAAACCACTCCACGGTGGACAGTGGTTATCTTTCTTaGCAGTCCAGGAACAAAGGG +
Preference number: 5 (lower is better)
Translates to: RGHWRGMVTASPNHSTVDSGYLS*QSRNKG
Trigger: CCCTTTGTTCCTGGACTGCAAAGAAAGATAACCACT...GTCCACCGTGGAGTGGTTTGGTGACGCTGTAACCATTCCACGCCAGTGACCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CAA 90 bp TGCATGGTGCTCCCTCAGCCCCAAGAGAGCGCAGTCTCTCATTCTCCAGCCCCAAAACCACCAATTTTCTaGCTGCTCCAAGACAGTAAT +
Preference number: 5 (lower is better)
Translates to: CMVLPQPQESAVSHSPAPKPPIF*LLQDSN
Trigger: ATTACTGTCTTGGAGCAGCAAGAAAATTGGTGGTTT...TGGGGCTGGAGAATGAGAGACTGCGCTCTCTTGGGGCTGAGGGAGCACCATGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CAA 90 bp GAAGCTGCATGGTGCTCCCTCAGCCCCAAGAGAGCGCAGTCTCTCATTCTCCAGCTCCAGGTTCCACACTaGAATATGGATAAAGTGCAA +
Preference number: 5 (lower is better)
Translates to: EAAWCSLSPKRAQSLILQLQVPH*NMDKVQ
Trigger: TTGCACTTTATCCATATTCAAGTGTGGAACCTGGAG...CTGGAGAATGAGAGACTGCGCTCTCTTGGGGCTGAGGGAGCACCATGCAGCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CAA 90 bp ACTGGCGTGGAATGGTTACAGCGTCACCAAACCACTCCACGGTGGACACATTCACACACCACTGTTGACTaGGATCTGAGTCTGTCGTCA +
Preference number: 5 (lower is better)
Translates to: TGVEWLQRHQTTPRWTHSHTTVD*DLSLSS
Trigger: TGACGACAGACTCAGATCCAAGTCAACAGTGGTGTG...TGAATGTGTCCACCGTGGAGTGGTTTGGTGACGCTGTAACCATTCCACGCCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CAA 90 bp GTCACCAAACCACTCCACGGTGGACACATTCAACCGAGCGGTAACATCTGGTGGTCTCAATTGGCTGCATaGTGTCCAGGGTTTGCAGAT +
Preference number: 5 (lower is better)
Translates to: VTKPLHGGHIQPSGNIWWSQLAA*CPGFAD
Trigger: ATCTGCAAACCCTGGACACAATGCAGCCAATTGAGA...CCACCAGATGTTACCGCTCGGTTGAATGTGTCCACCGTGGAGTGGTTTGGTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CAA 90 bp CTGCATGGTGCTCCCTCAGCCCCAAGAGAGCGCAGTCTCTCATTCTCCAGCCCCCTCTTTCCATTTGGTTaGCAGGCTTTTAATTCTGTA +
Preference number: 5 (lower is better)
Translates to: LHGAPSAPRERSLSFSSPLFPFG*QAFNSV
Trigger: TACAGAATTAAAAGCCTGCAAACCAAATGGAAAGAG...GGGGCTGGAGAATGAGAGACTGCGCTCTCTTGGGGCTGAGGGAGCACCATGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000427234.5
ENST00000622089.4
CDS-3UTR CAA 90 bp CCAAGAGAGCGCAGTCTCTCATTCTCCAGCCCCAGCCTTGTGGGCTGTCCCGCTTTATGGGAAAGGTGTTaGCATAGATTGCTAGCTATT +
Preference number: 5 (lower is better)
Translates to: PRERSLSFSSPSLVGCPALWERC*HRLLAI
Trigger: AATAGCTAGCAATCTATGCAAACACCTTTCCCATAA...AGCGGGACAGCCCACAAGGCTGGGGCTGGAGAATGAGAGACTGCGCTCTCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000427234.5
ENST00000622089.4
CDS-3UTR CAA 90 bp CCCAGCAGAGGTCACTGGCGTGGAATGGTTACAGCGTCACCAAACCACTCCACGACTGTACTATGGGGTTaGGTTTCTTTATGGGAAAGG +
Preference number: 5 (lower is better)
Translates to: PSRGHWRGMVTASPNHSTTVLWG*VSLWER
Trigger: CCTTTCCCATAAAGAAACCAAACCCCATAGTACAGT...CGTGGAGTGGTTTGGTGACGCTGTAACCATTCCACGCCAGTGACCTCTGCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS GCA 90 bp CACTCTTCCTTTTCTTTCTGGGCTTTACGTTCTGCCTCCCTTTGTTaGTGCTCCATCAAGGCTTGGCGTCGCTTTTCCAGCTCCATGTTC +
Preference number: 5 (lower is better)
Translates to: HSSFSFWALRSASLC*CSIKAWRRFSSSMF
Trigger: GAACATGGAGCTGGAAAAGCGACGCCAAGCCTTGATGGAGCAGCAACAAAGGGAGGCAGAACGTAAAGCCCAGAAAGAAAAGGAAGAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000406921.7
ENST00000412011.5
ENST00000622089.4
CDS-3UTR CAA 90 bp ACAGCGTCACCAAACCACTCCACGGTGGACACATTCAACCGAGCGGTAACATCTAGCTATGGAGAACTCTaGCTGATCCATCTTCCCATC +
Preference number: 5 (lower is better)
Translates to: TASPNHSTVDTFNRAVTSSYGEL*LIHLPI
Trigger: GATGGGAAGATGGATCAGCAAGAGTTCTCCATAGCT...AGATGTTACCGCTCGGTTGAATGTGTCCACCGTGGAGTGGTTTGGTGACGCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CAA 90 bp ACTGGCGTGGAATGGTTACAGCGTCACCAAACCACTCCACGGTGGACACATTCAAACCACAGGCAACTGTaGGCCTTGAAGCTTCAGTTT +
Preference number: 5 (lower is better)
Translates to: TGVEWLQRHQTTPRWTHSNHRQL*ALKLQF
Trigger: AAACTGAAGCTTCAAGGCCAACAGTTGCCTGTGGTT...TGAATGTGTCCACCGTGGAGTGGTTTGGTGACGCTGTAACCATTCCACGCCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CAA 90 bp TCTCAAGCATTATCCGGCAGGCAGAGACAGCATTTGGAGGATGTGAGAGCTTCCATTAAGGGAGGAAGGTaGGTCCCTGAAGTCGCAGAA +
Preference number: 5 (lower is better)
Translates to: SQALSGRQRQHLEDVRASIKGGR*VPEVAE
Trigger: TTCTGCGACTTCAGGGACCAACCTTCCTCCCTTAAT...GGAAGCTCTCACATCCTCCAAATGCTGTCTCTGCCTGCCGGATAATGCTTGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS-3UTR CAA 90 bp GTGAAGCTGCATGGTGCTCCCTCAGCCCCAAGAGAGCGCAGTCTCTCATTCTCCGAAGTAAGGCCTTCTTaGGAGATACAGCTTTTTCAT +
Preference number: 5 (lower is better)
Translates to: VKLHGAPSAPRERSLSFSEVRPS*EIQLFH
Trigger: ATGAAAAAGCTGTATCTCCAAAGAAGGCCTTACTTC...GGAGAATGAGAGACTGCGCTCTCTTGGGGCTGAGGGAGCACCATGCAGCTTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CAA 90 bp TGCACGAGTAGACGCTATTTCAGTATCAGGCCGCGCCAAGTGTCGAGGCTGCAGCTCCAGGTTCCACACTaGAATATGGATAAAGTGCAA +
Preference number: 5 (lower is better)
Translates to: CTSRRYFSIRPRQVSRLQLQVPH*NMDKVQ
Trigger: TTGCACTTTATCCATATTCAAGTGTGGAACCTGGAG...CTGCAGCCTCGACACTTGGCGCGGCCTGATACTGAAATAGCGTCTACTCGTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CAA 90 bp GGCTCCTGCCACATCCAACGAAGCCATGCGAATGCCCTCTTGTTCTCCCGCTTCACTCCCAAAACTCTCTaGATCCTTTGGTTTGACATA +
Preference number: 5 (lower is better)
Translates to: GSCHIQRSHANALLFSRFTPKTL*ILWFDI
Trigger: TATGTCAAACCAAAGGATCAAGAGAGTTTTGGGAGT...GAAGCGGGAGAACAAGAGGGCATTCGCATGGCTTCGTTGGATGTGGCAGGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS-3UTR CAA 90 bp CTTCCCCTCCTGAGTGGCTGTGACCCAGCAGAGGTCACTGGCGTGGAATGGTTACATAACATTAATGAGTaGTCCCTTGGAGAAACTGAG +
Preference number: 5 (lower is better)
Translates to: LPLLSGCDPAEVTGVEWLHNINE*SLGETE
Trigger: CTCAGTTTCTCCAAGGGACAACTCATTAATGTTATG...TAACCATTCCACGCCAGTGACCTCTGCTGGGTCACAGCCACTCAGGAGGGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CAA 90 bp ACTGGCGTGGAATGGTTACAGCGTCACCAAACCACTCCACGGTGGACACATTCATCTCAATTGGCTGCATaGTGTCCAGGGTTTGCAGAT +
Preference number: 5 (lower is better)
Translates to: TGVEWLQRHQTTPRWTHSSQLAA*CPGFAD
Trigger: ATCTGCAAACCCTGGACACAATGCAGCCAATTGAGA...TGAATGTGTCCACCGTGGAGTGGTTTGGTGACGCTGTAACCATTCCACGCCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CAA 90 bp ACTGGCGTGGAATGGTTACAGCGTCACCAAACCACTCCACGGTGGACACATTCAAGAAGCAGGAAGTCATaGAAGAGGAATCCGTGCAGT +
Preference number: 5 (lower is better)
Translates to: TGVEWLQRHQTTPRWTHSRSRKS*KRNPCS
Trigger: ACTGCACGGATTCCTCTTCAATGACTTCCTGCTTCT...TGAATGTGTCCACCGTGGAGTGGTTTGGTGACGCTGTAACCATTCCACGCCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CAA 90 bp GTCACCAAACCACTCCACGGTGGACACATTCAACCGAGCGGTAACATCTGGTGGCAGTTAAAATTCCACTaGGGATTGAGTGTGTCCTGG +
Preference number: 5 (lower is better)
Translates to: VTKPLHGGHIQPSGNIWWQLKFH*GLSVSW
Trigger: CCAGGACACACTCAATCCCAAGTGGAATTTTAACTG...CCACCAGATGTTACCGCTCGGTTGAATGTGTCCACCGTGGAGTGGTTTGGTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CAA 90 bp CTTCCCCTCCTGAGTGGCTGTGACCCAGCAGAGGTCACTGGCGTGGAATGGTTAGTTCTGTTCGAATTTTaGCCACTGGAATTTCAGTAC +
Preference number: 5 (lower is better)
Translates to: LPLLSGCDPAEVTGVEWLVLFEF*PLEFQY
Trigger: GTACTGAAATTCCAGTGGCAAAAATTCGAACAGAAC...TAACCATTCCACGCCAGTGACCTCTGCTGGGTCACAGCCACTCAGGAGGGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CAA 90 bp TATGGGTTGCTCTTTCCATTTGGTTTGCAGGCTTTTAATTCTGTAGCTTCAATGTCTCCAGCCCCAGCCTaGTGGGCTGTCCCGCTGGTG +
Preference number: 5 (lower is better)
Translates to: YGLLFPFGLQAFNSVASMSPAPA*WAVPLV
Trigger: CACCAGCGGGACAGCCCACAAGGCTGGGGCTGGAGA...CATTGAAGCTACAGAATTAAAAGCCTGCAAACCAAATGGAAAGAGCAACCCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427234.5
CDS-3UTR CAA 90 bp GGGGCTCCTGCCACATCCAACGAAGCCATGCGAATGCCCTCTTGTTCTCCCGCTATGGAAAGTCTTCTTTaGTTCACTCAAGCACAAATC +
Preference number: 5 (lower is better)
Translates to: GAPATSNEAMRMPSCSPAMESLL*FTQAQI
Trigger: GATTTGTGCTTGAGTGAACAAAAGAAGACTTTCCAT...AGCGGGAGAACAAGAGGGCATTCGCATGGCTTCGTTGGATGTGGCAGGAGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS TCA 90 bp CCGTCACTATTTGTGAATTCACACATCAAAAGTGATGCCTTGCTTTaGCTCTGCGTGGAGGCAGCCCTGAGTCTGATGCCCACCATCTCT +
Preference number: 5 (lower is better)
Translates to: PSLFVNSHIKSDALL*LCVEAALSLMPTIS
Trigger: AGAGATGGTGGGCATCAGACTCAGGGCTGCCTCCACGCAGAGTCAAAGCAAGGCATCACTTTTGATGTGTGAATTCACAAATAGTGACGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS-3UTR CAA 90 bp ACAAACAGAGCTGAACATGTGAACACTAGGACAAGGCACTGTACTATGGGGTTTCTGCTCCATCAAGGCTaGGCGTCGCTTTTCCAGCTC +
Preference number: 5 (lower is better)
Translates to: TNRAEHVNTRTRHCTMGFLLHQG*ASLFQL
Trigger: GAGCTGGAAAAGCGACGCCAAGCCTTGATGGAGCAG...AAACCCCATAGTACAGTGCCTTGTCCTAGTGTTCACATGTTCAGCTCTGTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CAA 90 bp AGAGGTCACTGGCGTGGAATGGTTACAGCGTCACCAAACCACTCCACGGTGGACTTGTTCTCTATTCTTTaGATTGAGAAGCTCCTGTCG +
Preference number: 5 (lower is better)
Translates to: RGHWRGMVTASPNHSTVDLFSIL*IEKLLS
Trigger: CGACAGGAGCTTCTCAATCAAAAGAATAGAGAACAA...GTCCACCGTGGAGTGGTTTGGTGACGCTGTAACCATTCCACGCCAGTGACCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CAA 90 bp TGCACGAGTAGACGCTATTTCAGTATCAGGCCGCGCCAAGTGTCGAGGCTGCAGTTCCTGAAGTTCCTGTaGAAGTTGCTTGATTTCCAT +
Preference number: 5 (lower is better)
Translates to: CTSRRYFSIRPRQVSRLQFLKFL*KLLDFH
Trigger: ATGGAAATCAAGCAACTTCAACAGGAACTTCAGGAA...CTGCAGCCTCGACACTTGGCGCGGCCTGATACTGAAATAGCGTCTACTCGTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CAA 90 bp CTCCTGCCACATCCAACGAAGCCATGCGAATGCCCTCTTGTTCTCCCGCTTCACTTCCTGAAGTTCCTGTaGAAGTTGCTTGATTTCCAT +
Preference number: 5 (lower is better)
Translates to: LLPHPTKPCECPLVLPLHFLKFL*KLLDFH
Trigger: ATGGAAATCAAGCAACTTCAACAGGAACTTCAGGAA...GTGAAGCGGGAGAACAAGAGGGCATTCGCATGGCTTCGTTGGATGTGGCAGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS-3UTR CAA 90 bp ACAGCGTCACCAAACCACTCCACGGTGGACACATTCAACCGAGCGGTAACATCTATCCTTATCCTTACGTaGTTTCTCCTCAGCTTTCCG +
Preference number: 5 (lower is better)
Translates to: TASPNHSTVDTFNRAVTSILILT*FLLSFP
Trigger: CGGAAAGCTGAGGAGAAACAACGTAAGGATAAGGAT...AGATGTTACCGCTCGGTTGAATGTGTCCACCGTGGAGTGGTTTGGTGACGCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CAA 90 bp ACTGGCGTGGAATGGTTACAGCGTCACCAAACCACTCCACGGTGGACACATTCACTGATGCTGGTTGATTaGAAGAAAGTGGTTCAGAGG +
Preference number: 5 (lower is better)
Translates to: TGVEWLQRHQTTPRWTHSLMLVD*KKVVQR
Trigger: CCTCTGAACCACTTTCTTCAAATCAACCAGCATCAG...TGAATGTGTCCACCGTGGAGTGGTTTGGTGACGCTGTAACCATTCCACGCCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CAA 90 bp GACCCAGCAGAGGTCACTGGCGTGGAATGGTTACAGCGTCACCAAACCACTCCAACTCCCAAAACTCTCTaGATCCTTTGGTTTGACATA +
Preference number: 5 (lower is better)
Translates to: DPAEVTGVEWLQRHQTTPTPKTL*ILWFDI
Trigger: TATGTCAAACCAAAGGATCAAGAGAGTTTTGGGAGT...TGGAGTGGTTTGGTGACGCTGTAACCATTCCACGCCAGTGACCTCTGCTGGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CAA 90 bp CGTCCTTCCTTGATGGGGCTCCTGCCACATCCAACGAAGCCATGCGAATGCCCTCTTGCCACCACCCACTaGTATTTTTCTTTAGAATTA +
Preference number: 5 (lower is better)
Translates to: RPSLMGLLPHPTKPCECPLATTH*YFSLEL
Trigger: TAATTCTAAAGAAAAATACAAGTGGGTGGTGGCAAG...AGGGCATTCGCATGGCTTCGTTGGATGTGGCAGGAGCCCCATCAAGGAAGGACG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS-3UTR CAA 90 bp CTTCCCCTCCTGAGTGGCTGTGACCCAGCAGAGGTCACTGGCGTGGAATGGTTACTTGCCACCACCCACTaGTATTTTTCTTTAGAATTA +
Preference number: 5 (lower is better)
Translates to: LPLLSGCDPAEVTGVEWLLATTH*YFSLEL
Trigger: TAATTCTAAAGAAAAATACAAGTGGGTGGTGGCAAG...TAACCATTCCACGCCAGTGACCTCTGCTGGGTCACAGCCACTCAGGAGGGGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CAA 90 bp CTTCCCCTCCTGAGTGGCTGTGACCCAGCAGAGGTCACTGGCGTGGAATGGTTACTCTTTCCATTTGGTTaGCAGGCTTTTAATTCTGTA +
Preference number: 5 (lower is better)
Translates to: LPLLSGCDPAEVTGVEWLLFPFG*QAFNSV
Trigger: TACAGAATTAAAAGCCTGCAAACCAAATGGAAAGAG...TAACCATTCCACGCCAGTGACCTCTGCTGGGTCACAGCCACTCAGGAGGGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CAA 90 bp AGAGGTCACTGGCGTGGAATGGTTACAGCGTCACCAAACCACTCCACGGTGGACGTTCTGTTCGAATTTTaGCCACTGGAATTTCAGTAC +
Preference number: 5 (lower is better)
Translates to: RGHWRGMVTASPNHSTVDVLFEF*PLEFQY
Trigger: GTACTGAAATTCCAGTGGCAAAAATTCGAACAGAAC...GTCCACCGTGGAGTGGTTTGGTGACGCTGTAACCATTCCACGCCAGTGACCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CAA 90 bp TCCACGGTGGACACATTCAACCGAGCGGTAACATCTGGTGGTCTGATGCCTCATCTACAGGAGAGTTTTTaGCTCAAAAAGCTGCAGGTC +
Preference number: 5 (lower is better)
Translates to: STVDTFNRAVTSGGLMPHLQESF*LKKLQV
Trigger: GACCTGCAGCTTTTTGAGCAAAAAACTCTCCTGTAG...ATGAGGCATCAGACCACCAGATGTTACCGCTCGGTTGAATGTGTCCACCGTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CAA 90 bp GTGAAGCTGCATGGTGCTCCCTCAGCCCCAAGAGAGCGCAGTCTCTCATTCTCCTTATGGGAAAGGTGTTaGCATAGATTGCTAGCTATT +
Preference number: 5 (lower is better)
Translates to: VKLHGAPSAPRERSLSFSLWERC*HRLLAI
Trigger: AATAGCTAGCAATCTATGCAAACACCTTTCCCATAA...GGAGAATGAGAGACTGCGCTCTCTTGGGGCTGAGGGAGCACCATGCAGCTTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000427234.5
ENST00000622089.4
CDS-3UTR CAA 90 bp ACTGGCGTGGAATGGTTACAGCGTCACCAAACCACTCCACGGTGGACACATTCAACCCATGAGGCAATGTaGAAGAAGAATAAGGAATGG +
Preference number: 5 (lower is better)
Translates to: TGVEWLQRHQTTPRWTHSTHEAM*KKNKEW
Trigger: CCATTCCTTATTCTTCTTCAACATTGCCTCATGGGT...TGAATGTGTCCACCGTGGAGTGGTTTGGTGACGCTGTAACCATTCCACGCCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CAA 90 bp ACAAACAGAGCTGAACATGTGAACACTAGGACAAGGCACTGTACTATGGGGTTTTCTGAGGTCCCAGTCTaGGGTGAGTTCCCTGAGAGT +
Preference number: 5 (lower is better)
Translates to: TNRAEHVNTRTRHCTMGFSEVPV*GEFPES
Trigger: ACTCTCAGGGAACTCACCCAAGACTGGGACCTCAGA...AAACCCCATAGTACAGTGCCTTGTCCTAGTGTTCACATGTTCAGCTCTGTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CAA 90 bp AAGTTTCTGTTTTTATTCAGTGCACGAGTAGACGCTATTTCAGTATCAGGCCGCCTGCTCCATCAAGGCTaGGCGTCGCTTTTCCAGCTC +
Preference number: 5 (lower is better)
Translates to: KFLFLFSARVDAISVSGRLLHQG*ASLFQL
Trigger: GAGCTGGAAAAGCGACGCCAAGCCTTGATGGAGCAG...GCGGCCTGATACTGAAATAGCGTCTACTCGTGCACTGAATAAAAACAGAAACTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CAA 90 bp GTCACCAAACCACTCCACGGTGGACACATTCAACCGAGCGGTAACATCTGGTGGTTCCTGAAGTTCCTGTaGAAGTTGCTTGATTTCCAT +
Preference number: 5 (lower is better)
Translates to: VTKPLHGGHIQPSGNIWWFLKFL*KLLDFH
Trigger: ATGGAAATCAAGCAACTTCAACAGGAACTTCAGGAA...CCACCAGATGTTACCGCTCGGTTGAATGTGTCCACCGTGGAGTGGTTTGGTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CAA 90 bp GTCACCAAACCACTCCACGGTGGACACATTCAACCGAGCGGTAACATCTGGTGGGAAGTAAGGCCTTCTTaGGAGATACAGCTTTTTCAT +
Preference number: 5 (lower is better)
Translates to: VTKPLHGGHIQPSGNIWWEVRPS*EIQLFH
Trigger: ATGAAAAAGCTGTATCTCCAAAGAAGGCCTTACTTC...CCACCAGATGTTACCGCTCGGTTGAATGTGTCCACCGTGGAGTGGTTTGGTGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CAA 90 bp ACTGGCGTGGAATGGTTACAGCGTCACCAAACCACTCCACGGTGGACACATTCAGAGACACAGCACGTCTaGGTAGAGATCCTTAATAAA +
Preference number: 5 (lower is better)
Translates to: TGVEWLQRHQTTPRWTHSETQHV*VEILNK
Trigger: TTTATTAAGGATCTCTACCAAGACGTGCTGTGTCTC...TGAATGTGTCCACCGTGGAGTGGTTTGGTGACGCTGTAACCATTCCACGCCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CAA 90 bp ACTGGCGTGGAATGGTTACAGCGTCACCAAACCACTCCACGGTGGACACATTCAACTGTACTATGGGGTTaGGTTTCTTTATGGGAAAGG +
Preference number: 5 (lower is better)
Translates to: TGVEWLQRHQTTPRWTHSTVLWG*VSLWER
Trigger: CCTTTCCCATAAAGAAACCAAACCCCATAGTACAGT...TGAATGTGTCCACCGTGGAGTGGTTTGGTGACGCTGTAACCATTCCACGCCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CAA 90 bp GGAGCGGGCTTGGTAAGCTTTCTCACGCTTCTTCTTCTCGGTGTCGATGTACTGACTGTACTATGGGGTTaGGTTTCTTTATGGGAAAGG +
Preference number: 5 (lower is better)
Translates to: GAGLVSFLTLLLLGVDVLTVLWG*VSLWER
Trigger: CCTTTCCCATAAAGAAACCAAACCCCATAGTACAGT...CAGTACATCGACACCGAGAAGAAGAAGCGTGAGAAAGCTTACCAAGCCCGCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427234.5
CDS CCA 90 bp CAATGTGGGAAATGTGGAAGACAGGCTCATCGCTGGAAGGGTCTGTaGGCAGTTTCACCAAGACTTCATTCAGGAAAATGGGCGTTTTAT +
Preference number: 5 (lower is better)
Translates to: QCGKCGRQAHRWKGL*AVSPRLHSGKWAFY
Trigger: ATAAAACGCCCATTTTCCTGAATGAAGTCTTGGTGAAACTGCCCACAGACCCTTCCAGCGATGAGCCTGTCTTCCACATTTCCCACATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000479575.1
ENST00000622089.4
CDS-3UTR CAA 90 bp GTGACCTCATCTGGGGGAAAGAGCTCATTAGAGACTTTCAATCTCAAGCATTATTCTGAGGTCCCAGTCTaGGGTGAGTTCCCTGAGAGT +
Preference number: 5 (lower is better)
Translates to: VTSSGGKSSLETFNLKHYSEVPV*GEFPES
Trigger: ACTCTCAGGGAACTCACCCAAGACTGGGACCTCAGA...ATAATGCTTGAGATTGAAAGTCTCTAATGAGCTCTTTCCCCCAGATGAGGTCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS-3UTR CAA 90 bp TCAATCTCAAGCATTATCCGGCAGGCAGAGACAGCATTTGGAGGATGTGAGAGCAGTGGTTATCTTTCTTaGCAGTCCAGGAACAAAGGG +
Preference number: 5 (lower is better)
Translates to: SISSIIRQAETAFGGCESSGYLS*QSRNKG
Trigger: CCCTTTGTTCCTGGACTGCAAAGAAAGATAACCACT...GCTCTCACATCCTCCAAATGCTGTCTCTGCCTGCCGGATAATGCTTGAGATTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS-3UTR CAA 90 bp AGAGACTTTCAATCTCAAGCATTATCCGGCAGGCAGAGACAGCATTTGGAGGATCACACCACTGTTGACTaGGATCTGAGTCTGTCGTCA +
Preference number: 5 (lower is better)
Translates to: RDFQSQALSGRQRQHLEDHTTVD*DLSLSS
Trigger: TGACGACAGACTCAGATCCAAGTCAACAGTGGTGTG...ATCCTCCAAATGCTGTCTCTGCCTGCCGGATAATGCTTGAGATTGAAAGTCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS-3UTR CAA 90 bp GTCACCAAACCACTCCACGGTGGACACATTCAACCGAGCGGTAACATCTGGTGGCTCTTTCCATTTGGTTaGCAGGCTTTTAATTCTGTA +
Preference number: 5 (lower is better)
Translates to: VTKPLHGGHIQPSGNIWWLFPFG*QAFNSV
Trigger: TACAGAATTAAAAGCCTGCAAACCAAATGGAAAGAG...CCACCAGATGTTACCGCTCGGTTGAATGTGTCCACCGTGGAGTGGTTTGGTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CAA 90 bp TCATCTGGTGAAAACTGGTCTCTGTCAAACAGGGTGAGACACAGCACGTCTTGGCAGTTAAAATTCCACTaGGGATTGAGTGTGTCCTGG +
Preference number: 5 (lower is better)
Translates to: SSGENWSLSNRVRHSTSWQLKFH*GLSVSW
Trigger: CCAGGACACACTCAATCCCAAGTGGAATTTTAACTG...CCAAGACGTGCTGTGTCTCACCCTGTTTGACAGAGACCAGTTTTCACCAGATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427234.5
CDS-3UTR CAA 90 bp GGGCCTTTGCTTTCCTGTTCTGTTCGAATTTTTGCCACTGGAATTTCAGTACGACGGGTCATAGGGCCTTaGCTTTCCTGTTCTGTTCGA +
Preference number: 5 (lower is better)
Translates to: GPLLSCSVRIFATGISVRRVIGP*LSCSVR
Trigger: TCGAACAGAACAGGAAAGCAAAGGCCCTATGACCCG...TCGTACTGAAATTCCAGTGGCAAAAATTCGAACAGAACAGGAAAGCAAAGGCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427234.5
CDS-3UTR CAA 90 bp TCCACGGTGGACACATTCAACCGAGCGGTAACATCTGGTGGTCTGATGCCTCATCTGAAAATGGAAACCTaGGCATCTAAACAAACAGAG +
Preference number: 5 (lower is better)
Translates to: STVDTFNRAVTSGGLMPHLKMET*ASKQTE
Trigger: CTCTGTTTGTTTAGATGCCAAGGTTTCCATTTTCAG...ATGAGGCATCAGACCACCAGATGTTACCGCTCGGTTGAATGTGTCCACCGTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS GCA 90 bp CTACCTGAGCTCCAGCTCCTACTAGATCCTAAATCAATCAGAGACTaGGCTTTCTGTATACTAGCACCTCCAAATCCTCCCATCATCAGA +
Preference number: 5 (lower is better)
Translates to: LPELQLLLDPKSIRD*AFCILAPPNPPIIR
Trigger: TCTGATGATGGGAGGATTTGGAGGTGCTAGTATACAGAAAGCGCAGTCTCTGATTGATTTAGGATCTAGTAGGAGCTGGAGCTCAGGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412011.5
CDS CCA 90 bp CACCTGACATACAGGATGAAAGGCAGGTGTGGCTCTTTCACTACTTaGACCCAAAAGTTTAACATGACTGGCAGGAAACCATCCTTTCTG +
Preference number: 5 (lower is better)
Translates to: HLTYRMKGRCGSFTT*TQKFNMTGRKPSFL
Trigger: CAGAAAGGATGGTTTCCTGCCAGTCATGTTAAACTTTTGGGTCCAAGTAGTGAAAGAGCCACACCTGCCTTTCATCCTGTATGTCAGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000406921.7
ENST00000416160.1
ENST00000622089.4
CDS-3UTR CAA 90 bp GATATTAGGCAAATATCCAAGGAAGCTACGGTCTGCCATAGGCCCTTCCCATCCTTAATGAGTTGTCCCTaGGAGAAACTGAGCTCATCT +
Preference number: 5 (lower is better)
Translates to: DIRQISKEATVCHRPFPSLMSCP*EKLSSS
Trigger: AGATGAGCTCAGTTTCTCCAAGGGACAACTCATTAA...GGATGGGAAGGGCCTATGGCAGACCGTAGCTTCCTTGGATATTTGCCTAATATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS-3UTR CAA 90 bp AAGTGCTACTCGAATAAGGATAGCTGTCATCAGCGTAGAGGTCACTGGTATAAACATTGTGTCCAGGGTTaGCAGATCAGCACACCACTG +
Preference number: 5 (lower is better)
Translates to: KCYSNKDSCHQRRGHWYKHCVQG*QISTPL
Trigger: CAGTGGTGTGCTGATCTGCAAACCCTGGACACAATG...TTTATACCAGTGACCTCTACGCTGATGACAGCTATCCTTATTCGAGTAGCACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS-3UTR CAA 90 bp ACAAACAGAGCTGAACATGTGAACACTAGGACAAGGCACTGTACTATGGGGTTTGTCTTTTCCTCTCAATaGGCTGCATTGTGTCCAGGG +
Preference number: 5 (lower is better)
Translates to: TNRAEHVNTRTRHCTMGFVFSSQ*AALCPG
Trigger: CCCTGGACACAATGCAGCCAATTGAGAGGAAAAGAC...AAACCCCATAGTACAGTGCCTTGTCCTAGTGTTCACATGTTCAGCTCTGTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS GCA 90 bp GCAGTCGAGGAAGTTGAGCTACTAGATCCTAAATCAATCAGAGACTaGGCTTTCTGTATACTAGCACCTCCAAATCCTCCCATCATCAGA +
Preference number: 5 (lower is better)
Translates to: AVEEVELLDPKSIRD*AFCILAPPNPPIIR
Trigger: TCTGATGATGGGAGGATTTGGAGGTGCTAGTATACAGAAAGCGCAGTCTCTGATTGATTTAGGATCTAGTAGCTCAACTTCCTCGACTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000406921.7
ENST00000622089.4
CDS-3UTR CAA 90 bp AGAGACTTTCAATCTCAAGCATTATCCGGCAGGCAGAGACAGCATTTGGAGGATTCCATCTTCCCATCCTaGTTTAGGTCTGATAAAGCC +
Preference number: 5 (lower is better)
Translates to: RDFQSQALSGRQRQHLEDSIFPS*FRSDKA
Trigger: GGCTTTATCAGACCTAAACAAGGATGGGAAGATGGA...ATCCTCCAAATGCTGTCTCTGCCTGCCGGATAATGCTTGAGATTGAAAGTCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS-3UTR CAA 90 bp ACAAACAGAGCTGAACATGTGAACACTAGGACAAGGCACTGTACTATGGGGTTTAGCTATGGAGAACTCTaGCTGATCCATCTTCCCATC +
Preference number: 5 (lower is better)
Translates to: TNRAEHVNTRTRHCTMGFSYGEL*LIHLPI
Trigger: GATGGGAAGATGGATCAGCAAGAGTTCTCCATAGCT...AAACCCCATAGTACAGTGCCTTGTCCTAGTGTTCACATGTTCAGCTCTGTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CAA 90 bp GATGCCTCATTTCCAAGTAATACTTTTTATAGCCCTGAAAATGGAAACCTTGGCTCTGAGGTCCCAGTCTaGGGTGAGTTCCCTGAGAGT +
Preference number: 5 (lower is better)
Translates to: DASFPSNTFYSPENGNLGSEVPV*GEFPES
Trigger: ACTCTCAGGGAACTCACCCAAGACTGGGACCTCAGA...GCCAAGGTTTCCATTTTCAGGGCTATAAAAAGTATTACTTGGAAATGAGGCATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CAA 90 bp GTACTATGGGGTTTGGTTTCTTTATGGGAAAGGTGTTTGCATAGATTGCTAGCTAATGGCTGTCCAGCTTaGGCCATGTCAGTAAGGTGC +
Preference number: 5 (lower is better)
Translates to: VLWGLVSLWERCLHRLLANGCPA*AMSVRC
Trigger: GCACCTTACTGACATGGCCAAAGCTGGACAGCCATT...AGCTAGCAATCTATGCAAACACCTTTCCCATAAAGAAACCAAACCCCATAGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CAA 90 bp AAGTTTCTGTTTTTATTCAGTGCACGAGTAGACGCTATTTCAGTATCAGGCCGCCCTTTCTTCCTCTCGTaGTCTCTCCAATTCCCGTTG +
Preference number: 5 (lower is better)
Translates to: KFLFLFSARVDAISVSGRPFFLS*SLQFPL
Trigger: CAACGGGAATTGGAGAGACAACGAGAGGAAGAAAGG...GCGGCCTGATACTGAAATAGCGTCTACTCGTGCACTGAATAAAAACAGAAACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CAA 90 bp GATATTAGGCAAATATCCAAGGAAGCTACGGTCTGCCATAGGCCCTTCCCATCCAAACCACCAATTTTCTaGCTGCTCCAAGACAGTAAT +
Preference number: 5 (lower is better)
Translates to: DIRQISKEATVCHRPFPSKPPIF*LLQDSN
Trigger: ATTACTGTCTTGGAGCAGCAAGAAAATTGGTGGTTT...GGATGGGAAGGGCCTATGGCAGACCGTAGCTTCCTTGGATATTTGCCTAATATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS-3UTR CAA 90 bp ACAAACAGAGCTGAACATGTGAACACTAGGACAAGGCACTGTACTATGGGGTTTTGGTGCAAGGCTAAGTaGTTCAGAACCAGAAGCAAC +
Preference number: 5 (lower is better)
Translates to: TNRAEHVNTRTRHCTMGFWCKAK*FRTRSN
Trigger: GTTGCTTCTGGTTCTGAACAACTTAGCCTTGCACCA...AAACCCCATAGTACAGTGCCTTGTCCTAGTGTTCACATGTTCAGCTCTGTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CAA 90 bp ATCAAGTTTCTGTTTTTATTCAGTGCACGAGTAGACGCTATTTCAGTATCAGGCAGACCAGTCACCCCGTaGATCTCTCCTTGCCACCAA +
Preference number: 5 (lower is better)
Translates to: IKFLFLFSARVDAISVSGRPVTP*ISPCHQ
Trigger: TTGGTGGCAAGGAGAGATCAACGGGGTGACTGGTCT...GCCTGATACTGAAATAGCGTCTACTCGTGCACTGAATAAAAACAGAAACTTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CAA 90 bp AAGTTTCTGTTTTTATTCAGTGCACGAGTAGACGCTATTTCAGTATCAGGCCGCGTCTTTTCCTCTCAATaGGCTGCATTGTGTCCAGGG +
Preference number: 5 (lower is better)
Translates to: KFLFLFSARVDAISVSGRVFSSQ*AALCPG
Trigger: CCCTGGACACAATGCAGCCAATTGAGAGGAAAAGAC...GCGGCCTGATACTGAAATAGCGTCTACTCGTGCACTGAATAAAAACAGAAACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CAA 90 bp GTGACCTCATCTGGGGGAAAGAGCTCATTAGAGACTTTCAATCTCAAGCATTATGTCTTTTCCTCTCAATaGGCTGCATTGTGTCCAGGG +
Preference number: 5 (lower is better)
Translates to: VTSSGGKSSLETFNLKHYVFSSQ*AALCPG
Trigger: CCCTGGACACAATGCAGCCAATTGAGAGGAAAAGAC...ATAATGCTTGAGATTGAAAGTCTCTAATGAGCTCTTTCCCCCAGATGAGGTCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS TCA 90 bp AGTCTTTTGAGTTTGCTTTTTGAGTCGGACATCCTGAAGTCTGCCTaGGATCTGCTGATGTTTGCCATTCAGTGCTTCCAACTCAAGATG +
Preference number: 5 (lower is better)
Translates to: SLLSLLFESDILKSA*DLLMFAIQCFQLKM
Trigger: CATCTTGAGTTGGAAGCACTGAATGGCAAACATCAGCAGATCTCAGGCAGACTTCAGGATGTCCGACTCAAAAAGCAAACTCAAAAGACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000406921.7
ENST00000412011.5
ENST00000622089.4
CDS GCA 90 bp AAAGTCAGTGGTAATGGCTGTCCAGCTTTGGCCATGTCAGTAAGGTaGATTGCAAGAATAAACTCTTCTGCTTTTAGCTGTCCATCACCA +
Preference number: 5 (lower is better)
Translates to: KVSGNGCPALAMSVR*IARINSSAFSCPSP
Trigger: TGGTGATGGACAGCTAAAAGCAGAAGAGTTTATTCTTGCAATGCACCTTACTGACATGGCCAAAGCTGGACAGCCATTACCACTGACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000406921.7
ENST00000412011.5
ENST00000622089.4
CDS-3UTR CAA 90 bp GATCAAGTTTCTGTTTTTATTCAGTGCACGAGTAGACGCTATTTCAGTATCAGGGGTCCTGAGTTTTCCTaGCTAGCTCTCAGCCATCTG +
Preference number: 5 (lower is better)
Translates to: DQVSVFIQCTSRRYFSIRGPEFS*LALSHL
Trigger: CAGATGGCTGAGAGCTAGCAAGGAAAACTCAGGACC...CCTGATACTGAAATAGCGTCTACTCGTGCACTGAATAAAAACAGAAACTTGATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355123.9
ENST00000361999.7
CDS-3UTR CAA 90 bp ACAAACAGAGCTGAACATGTGAACACTAGGACAAGGCACTGTACTATGGGGTTTTCCATCTTCCCATCCTaGTTTAGGTCTGATAAAGCC +
Preference number: 5 (lower is better)
Translates to: TNRAEHVNTRTRHCTMGFSIFPS*FRSDKA
Trigger: GGCTTTATCAGACCTAAACAAGGATGGGAAGATGGA...AAACCCCATAGTACAGTGCCTTGTCCTAGTGTTCACATGTTCAGCTCTGTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CAA 90 bp GTGACCTCATCTGGGGGAAAGAGCTCATTAGAGACTTTCAATCTCAAGCATTATAACCACAGGCAACTGTaGGCCTTGAAGCTTCAGTTT +
Preference number: 5 (lower is better)
Translates to: VTSSGGKSSLETFNLKHYNHRQL*ALKLQF
Trigger: AAACTGAAGCTTCAAGGCCAACAGTTGCCTGTGGTT...ATAATGCTTGAGATTGAAAGTCTCTAATGAGCTCTTTCCCCCAGATGAGGTCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS-3UTR CAA 90 bp ACAAACAGAGCTGAACATGTGAACACTAGGACAAGGCACTGTACTATGGGGTTTGTTCAAGTTCCTGTTTaGCTGCCTCTCGTCTTTCTA +
Preference number: 5 (lower is better)
Translates to: TNRAEHVNTRTRHCTMGFVQVPV*LPLVFL
Trigger: TAGAAAGACGAGAGGCAGCAAAACAGGAACTTGAAC...AAACCCCATAGTACAGTGCCTTGTCCTAGTGTTCACATGTTCAGCTCTGTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CAA 90 bp AGAGACTTTCAATCTCAAGCATTATCCGGCAGGCAGAGACAGCATTTGGAGGATTTCCAGCTCAGTCTTTaGAGTTTGCTTTTTGAGTCG +
Preference number: 5 (lower is better)
Translates to: RDFQSQALSGRQRQHLEDFQLSL*SLLFES
Trigger: CGACTCAAAAAGCAAACTCAAAAGACTGAGCTGGAA...ATCCTCCAAATGCTGTCTCTGCCTGCCGGATAATGCTTGAGATTGAAAGTCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS-3UTR CAA 90 bp ACAAACAGAGCTGAACATGTGAACACTAGGACAAGGCACTGTACTATGGGGTTTATCCTTATCCTTACGTaGTTTCTCCTCAGCTTTCCG +
Preference number: 5 (lower is better)
Translates to: TNRAEHVNTRTRHCTMGFILILT*FLLSFP
Trigger: CGGAAAGCTGAGGAGAAACAACGTAAGGATAAGGAT...AAACCCCATAGTACAGTGCCTTGTCCTAGTGTTCACATGTTCAGCTCTGTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CAA 90 bp GATGCCTCATTTCCAAGTAATACTTTTTATAGCCCTGAAAATGGAAACCTTGGCCCCGTTGATCTCTCCTaGCCACCAATCAGGATCATC +
Preference number: 5 (lower is better)
Translates to: DASFPSNTFYSPENGNLGPVDLS*PPIRII
Trigger: GATGATCCTGATTGGTGGCAAGGAGAGATCAACGGG...GCCAAGGTTTCCATTTTCAGGGCTATAAAAAGTATTACTTGGAAATGAGGCATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CAA 90 bp TTTCCATTTGGTTTGCAGGCTTTTAATTCTGTAGCTTCAATGACATGCACCATCCTTTTGGGAGCGGGCTaGGTAAGCTTTCTCACGCTT +
Preference number: 5 (lower is better)
Translates to: FPFGLQAFNSVASMTCTILLGAG*VSFLTL
Trigger: AAGCGTGAGAAAGCTTACCAAGCCCGCTCCCAAAAG...GATGGTGCATGTCATTGAAGCTACAGAATTAAAAGCCTGCAAACCAAATGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427234.5
CDS-3UTR CAA 90 bp GATGCCTCATTTCCAAGTAATACTTTTTATAGCCCTGAAAATGGAAACCTTGGCCGGGTCATAGGGCCTTaGCTTTCCTGTTCTGTTCGA +
Preference number: 5 (lower is better)
Translates to: DASFPSNTFYSPENGNLGRVIGP*LSCSVR
Trigger: TCGAACAGAACAGGAAAGCAAAGGCCCTATGACCCG...GCCAAGGTTTCCATTTTCAGGGCTATAAAAAGTATTACTTGGAAATGAGGCATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000427234.5
ENST00000622089.4
CDS TCA 90 bp TTGTCAAGAGTATTAAATTTTTGCCGATATTTTAATCTTGTAGGCTaGGGAACTGCCCACTCTGAGGTCCCAGTCTTGGGTGAGTTCCCT +
Preference number: 5 (lower is better)
Translates to: LSRVLNFCRYFNLVG*GTAHSEVPVLGEFP
Trigger: AGGGAACTCACCCAAGACTGGGACCTCAGAGTGGGCAGTTCCTCAGCCTACAAGATTAAAATATCGGCAAAAATTTAATACTCTTGACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000406921.7
ENST00000412011.5
ENST00000622089.4
CDS-3UTR CAA 90 bp ATCAAGTTTCTGTTTTTATTCAGTGCACGAGTAGACGCTATTTCAGTATCAGGCCCTTTCTTCCTCTCGTaGTCTCTCCAATTCCCGTTG +
Preference number: 5 (lower is better)
Translates to: IKFLFLFSARVDAISVSGPFFLS*SLQFPL
Trigger: CAACGGGAATTGGAGAGACAACGAGAGGAAGAAAGG...GCCTGATACTGAAATAGCGTCTACTCGTGCACTGAATAAAAACAGAAACTTGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CAA 90 bp TTAAAGTGCTACTCGAATAAGGATAGCTGTCATCAGCGTAGAGGTCACTGGTATCTGATGCTGGTTGATTaGAAGAAAGTGGTTCAGAGG +
Preference number: 5 (lower is better)
Translates to: LKCYSNKDSCHQRRGHWYLMLVD*KKVVQR
Trigger: CCTCTGAACCACTTTCTTCAAATCAACCAGCATCAG...ATACCAGTGACCTCTACGCTGATGACAGCTATCCTTATTCGAGTAGCACTTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS-3UTR CAA 90 bp GTACTATGGGGTTTGGTTTCTTTATGGGAAAGGTGTTTGCATAGATTGCTAGCTAGAAGCAGGAAGTCATaGAAGAGGAATCCGTGCAGT +
Preference number: 5 (lower is better)
Translates to: VLWGLVSLWERCLHRLLARSRKS*KRNPCS
Trigger: ACTGCACGGATTCCTCTTCAATGACTTCCTGCTTCT...AGCTAGCAATCTATGCAAACACCTTTCCCATAAAGAAACCAAACCCCATAGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000427234.5
ENST00000622089.4
CDS-3UTR CAA 90 bp TTTCACTGTTTCACAGTTCCTCCAGAGATACCAGTTTATGAAAATGTCAGATGTAGGCAGAGACAGCATTaGGAGGATGTGAGAGCTTCC +
Preference number: 5 (lower is better)
Translates to: FHCFTVPPEIPVYENVRCRQRQH*EDVRAS
Trigger: GGAAGCTCTCACATCCTCCAAATGCTGTCTCTGCCT...ACATCTGACATTTTCATAAACTGGTATCTCTGGAGGAACTGTGAAACAGTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS-3UTR CAA 90 bp CCATTTGGTTTGCAGGCTTTTAATTCTGTAGCTTCAATGACATGCACCATCAGGAAAATGGGGGAAACCTaGGTAAGCTTTCTCACGCTT +
Preference number: 5 (lower is better)
Translates to: PFGLQAFNSVASMTCTIRKMGET*VSFLTL
Trigger: AAGCGTGAGAAAGCTTACCAAGGTTTCCCCCATTTT...CCTGATGGTGCATGTCATTGAAGCTACAGAATTAAAAGCCTGCAAACCAAATGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000449392.1
CDS-3UTR CAA 90 bp GTACTATGGGGTTTGGTTTCTTTATGGGAAAGGTGTTTGCATAGATTGCTAGCTAGAAAACATAGGGGGTaGCTTCATAATAGGAGGGAG +
Preference number: 5 (lower is better)
Translates to: VLWGLVSLWERCLHRLLARKHRG*LHNRRE
Trigger: CTCCCTCCTATTATGAAGCAACCCCCTATGTTTTCT...AGCTAGCAATCTATGCAAACACCTTTCCCATAAAGAAACCAAACCCCATAGTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CAA 90 bp ACAAACAGAGCTGAACATGTGAACACTAGGACAAGGCACTGTACTATGGGGTTTGAGTTTGAGAAAGATTaGACTGAAGAAGGGCATTTC +
Preference number: 5 (lower is better)
Translates to: TNRAEHVNTRTRHCTMGFEFEKD*TEEGHF
Trigger: GAAATGCCCTTCTTCAGTCAAATCTTTCTCAAACTC...AAACCCCATAGTACAGTGCCTTGTCCTAGTGTTCACATGTTCAGCTCTGTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CAA 90 bp TTTCACTGTTTCACAGTTCCTCCAGAGATACCAGTTTATGAAAATGTCAGATGTCCTTTCTTCCTCTCGTaGTCTCTCCAATTCCCGTTG +
Preference number: 5 (lower is better)
Translates to: FHCFTVPPEIPVYENVRCPFFLS*SLQFPL
Trigger: CAACGGGAATTGGAGAGACAACGAGAGGAAGAAAGG...ACATCTGACATTTTCATAAACTGGTATCTCTGGAGGAACTGTGAAACAGTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS-3UTR CAA 90 bp AAGTTTCTGTTTTTATTCAGTGCACGAGTAGACGCTATTTCAGTATCAGGCCGCTTCCAGCTCAGTCTTTaGAGTTTGCTTTTTGAGTCG +
Preference number: 5 (lower is better)
Translates to: KFLFLFSARVDAISVSGRFQLSL*SLLFES
Trigger: CGACTCAAAAAGCAAACTCAAAAGACTGAGCTGGAA...GCGGCCTGATACTGAAATAGCGTCTACTCGTGCACTGAATAAAAACAGAAACTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CAA 90 bp GATGCCTCATTTCCAAGTAATACTTTTTATAGCCCTGAAAATGGAAACCTTGGCTTTGATGCTCCAGACTaGCTAGCACTCCCAAAACTC +
Preference number: 5 (lower is better)
Translates to: DASFPSNTFYSPENGNLGFDAPD*LALPKL
Trigger: GAGTTTTGGGAGTGCTAGCAAGTCTGGAGCATCAAA...GCCAAGGTTTCCATTTTCAGGGCTATAAAAAGTATTACTTGGAAATGAGGCATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CAA 90 bp CAAGCACAAATCATTTTAAAGTGCTACTCGAATAAGGATAGCTGTCATCAGCGTTGGTGCAAGGCTAAGTaGTTCAGAACCAGAAGCAAC +
Preference number: 5 (lower is better)
Translates to: QAQIILKCYSNKDSCHQRWCKAK*FRTRSN
Trigger: GTTGCTTCTGGTTCTGAACAACTTAGCCTTGCACCA...ACGCTGATGACAGCTATCCTTATTCGAGTAGCACTTTAAAATGATTTGTGCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS-3UTR CAA 90 bp GATGCCTCATTTCCAAGTAATACTTTTTATAGCCCTGAAAATGGAAACCTTGGCTGGTGCAAGGCTAAGTaGTTCAGAACCAGAAGCAAC +
Preference number: 5 (lower is better)
Translates to: DASFPSNTFYSPENGNLGWCKAK*FRTRSN
Trigger: GTTGCTTCTGGTTCTGAACAACTTAGCCTTGCACCA...GCCAAGGTTTCCATTTTCAGGGCTATAAAAAGTATTACTTGGAAATGAGGCATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CAA 90 bp CAAGCACAAATCATTTTAAAGTGCTACTCGAATAAGGATAGCTGTCATCAGCGTTCTCAATTGGCTGCATaGTGTCCAGGGTTTGCAGAT +
Preference number: 5 (lower is better)
Translates to: QAQIILKCYSNKDSCHQRSQLAA*CPGFAD
Trigger: ATCTGCAAACCCTGGACACAATGCAGCCAATTGAGA...ACGCTGATGACAGCTATCCTTATTCGAGTAGCACTTTAAAATGATTTGTGCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS-3UTR CAA 90 bp ACAAACAGAGCTGAACATGTGAACACTAGGACAAGGCACTGTACTATGGGGTTTCTGAAAATGGAAACCTaGGCATCTAAACAAACAGAG +
Preference number: 5 (lower is better)
Translates to: TNRAEHVNTRTRHCTMGFLKMET*ASKQTE
Trigger: CTCTGTTTGTTTAGATGCCAAGGTTTCCATTTTCAG...AAACCCCATAGTACAGTGCCTTGTCCTAGTGTTCACATGTTCAGCTCTGTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000427234.5
ENST00000622089.4
CDS TCA 90 bp ACCACTCTCCATCTTTCTGGGTCACCAATATTTCTTCACCTTCTGTaGAAGTCAAATCTCCAGGTTCCACACTTGAATATGGATAAAGTG +
Preference number: 5 (lower is better)
Translates to: TTLHLSGSPIFLHLL*KSNLQVPHLNMDKV
Trigger: CACTTTATCCATATTCAAGTGTGGAACCTGGAGATTTGACTTTCACAGAAGGTGAAGAAATATTGGTGACCCAGAAAGATGGAGAGTGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000406921.7
ENST00000622089.4
CDS TCA 90 bp TGGAGTTTTCTAGGTGGGAATGTGGCTAGAATCATTCACTTTGCATaGAAGATCCTTAAATACATTACTCTTCAGAGTCCAAACTGGCCC +
Preference number: 5 (lower is better)
Translates to: WSFLGGNVARIIHFA*KILKYITLQSPNWP
Trigger: GGGCCAGTTTGGACTCTGAAGAGTAATGTATTTAAGGATCTTTCATGCAAAGTGAATGATTCTAGCCACATTCCCACCTAGAAAACTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479575.1
CDS GCA 90 bp AATGAGTTGTCCCTTGGAGAAACTGAGCTCATCTTCATTATTTGCTaGATAGTCATACATAGCAATCACCTGACATACAGGATGAAAGGC +
Preference number: 5 (lower is better)
Translates to: NELSLGETELIFIIC*IVIHSNHLTYRMKG
Trigger: GCCTTTCATCCTGTATGTCAGGTGATTGCTATGTATGACTATGCAGCAAATAATGAAGATGAGCTCAGTTTCTCCAAGGGACAACTCATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000406921.7
ENST00000416160.1
ENST00000622089.4
CDS-3UTR CAA 90 bp AAGTTTCTGTTTTTATTCAGTGCACGAGTAGACGCTATTTCAGTATCAGGCCGCTTCCTGAAGTTCCTGTaGAAGTTGCTTGATTTCCAT +
Preference number: 5 (lower is better)
Translates to: KFLFLFSARVDAISVSGRFLKFL*KLLDFH
Trigger: ATGGAAATCAAGCAACTTCAACAGGAACTTCAGGAA...GCGGCCTGATACTGAAATAGCGTCTACTCGTGCACTGAATAAAAACAGAAACTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CAA 90 bp GATCAAGTTTCTGTTTTTATTCAGTGCACGAGTAGACGCTATTTCAGTATCAGGATCCTTATCCTTACGTaGTTTCTCCTCAGCTTTCCG +
Preference number: 5 (lower is better)
Translates to: DQVSVFIQCTSRRYFSIRILILT*FLLSFP
Trigger: CGGAAAGCTGAGGAGAAACAACGTAAGGATAAGGAT...CCTGATACTGAAATAGCGTCTACTCGTGCACTGAATAAAAACAGAAACTTGATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CAA 90 bp GTGACCTCATCTGGGGGAAAGAGCTCATTAGAGACTTTCAATCTCAAGCATTATGAAGTAAGGCCTTCTTaGGAGATACAGCTTTTTCAT +
Preference number: 5 (lower is better)
Translates to: VTSSGGKSSLETFNLKHYEVRPS*EIQLFH
Trigger: ATGAAAAAGCTGTATCTCCAAAGAAGGCCTTACTTC...ATAATGCTTGAGATTGAAAGTCTCTAATGAGCTCTTTCCCCCAGATGAGGTCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS-3UTR CAA 90 bp AAGTTTCTGTTTTTATTCAGTGCACGAGTAGACGCTATTTCAGTATCAGGCCGCCATAACATTAATGAGTaGTCCCTTGGAGAAACTGAG +
Preference number: 5 (lower is better)
Translates to: KFLFLFSARVDAISVSGRHNINE*SLGETE
Trigger: CTCAGTTTCTCCAAGGGACAACTCATTAATGTTATG...GCGGCCTGATACTGAAATAGCGTCTACTCGTGCACTGAATAAAAACAGAAACTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CAA 90 bp ACAAACAGAGCTGAACATGTGAACACTAGGACAAGGCACTGTACTATGGGGTTTTTATGGGAAAGGTGTTaGCATAGATTGCTAGCTATT +
Preference number: 5 (lower is better)
Translates to: TNRAEHVNTRTRHCTMGFLWERC*HRLLAI
Trigger: AATAGCTAGCAATCTATGCAAACACCTTTCCCATAA...AAACCCCATAGTACAGTGCCTTGTCCTAGTGTTCACATGTTCAGCTCTGTTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000427234.5
ENST00000622089.4
CDS-3UTR CAA 90 bp ACTCAAGCACAAATCATTTTAAAGTGCTACTCGAATAAGGATAGCTGTCATCAGGTTCAAGTTCCTGTTTaGCTGCCTCTCGTCTTTCTA +
Preference number: 5 (lower is better)
Translates to: TQAQIILKCYSNKDSCHQVQVPV*LPLVFL
Trigger: TAGAAAGACGAGAGGCAGCAAAACAGGAACTTGAAC...CTGATGACAGCTATCCTTATTCGAGTAGCACTTTAAAATGATTTGTGCTTGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS-3UTR CAA 90 bp TTTCACTGTTTCACAGTTCCTCCAGAGATACCAGTTTATGAAAATGTCAGATGTAGTAAGAGGAAGAGGTaGTTGAGACAGCTTAGCAGA +
Preference number: 5 (lower is better)
Translates to: FHCFTVPPEIPVYENVRCSKRKR*LRQLSR
Trigger: TCTGCTAAGCTGTCTCAACAACCTCTTCCTCTTACT...ACATCTGACATTTTCATAAACTGGTATCTCTGGAGGAACTGTGAAACAGTGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS-3UTR CAA 90 bp CAAGCACAAATCATTTTAAAGTGCTACTCGAATAAGGATAGCTGTCATCAGCGTCTCCAGGTTCCACACTaGAATATGGATAAAGTGCAA +
Preference number: 5 (lower is better)
Translates to: QAQIILKCYSNKDSCHQRLQVPH*NMDKVQ
Trigger: TTGCACTTTATCCATATTCAAGTGTGGAACCTGGAG...ACGCTGATGACAGCTATCCTTATTCGAGTAGCACTTTAAAATGATTTGTGCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS-3UTR CAA 90 bp GATGCCTCATTTCCAAGTAATACTTTTTATAGCCCTGAAAATGGAAACCTTGGCTTAATGAGTTGTCCCTaGGAGAAACTGAGCTCATCT +
Preference number: 5 (lower is better)
Translates to: DASFPSNTFYSPENGNLGLMSCP*EKLSSS
Trigger: AGATGAGCTCAGTTTCTCCAAGGGACAACTCATTAA...GCCAAGGTTTCCATTTTCAGGGCTATAAAAAGTATTACTTGGAAATGAGGCATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CAA 90 bp AATAAGGATAGCTGTCATCAGCGTAGAGGTCACTGGTATAAACAAACAGTAGCTCATAACATTAATGAGTaGTCCCTTGGAGAAACTGAG +
Preference number: 5 (lower is better)
Translates to: NKDSCHQRRGHWYKQTVAHNINE*SLGETE
Trigger: CTCAGTTTCTCCAAGGGACAACTCATTAATGTTATG...AGCTACTGTTTGTTTATACCAGTGACCTCTACGCTGATGACAGCTATCCTTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS TCA 90 bp CCACCAATTTTCTTGCTGCTCCAAGACAGTAATAATGTCATGTTTTaGGAAGTTCAAGTGGTTATCTTTCTTTGCAGTCCAGGAACAAAG +
Preference number: 5 (lower is better)
Translates to: PPIFLLLQDSNNVMF*EVQVVIFLCSPGTK
Trigger: CTTTGTTCCTGGACTGCAAAGAAAGATAACCACTTGAACTTCTCAAAACATGACATTATTACTGTCTTGGAGCAGCAAGAAAATTGGTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000406921.7
ENST00000622089.4
CDS-3UTR CAA 90 bp ATGATCAAGTTTCTGTTTTTATTCAGTGCACGAGTAGACGCTATTTCAGTATCAAGAAAACATAGGGGGTaGCTTCATAATAGGAGGGAG +
Preference number: 5 (lower is better)
Translates to: MIKFLFLFSARVDAISVSRKHRG*LHNRRE
Trigger: CTCCCTCCTATTATGAAGCAACCCCCTATGTTTTCT...TGATACTGAAATAGCGTCTACTCGTGCACTGAATAAAAACAGAAACTTGATCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CAA 90 bp TTGTTCACTCAAGCACAAATCATTTTAAAGTGCTACTCGAATAAGGATAGCTGTAGAAAACATAGGGGGTaGCTTCATAATAGGAGGGAG +
Preference number: 5 (lower is better)
Translates to: LFTQAQIILKCYSNKDSCRKHRG*LHNRRE
Trigger: CTCCCTCCTATTATGAAGCAACCCCCTATGTTTTCT...ACAGCTATCCTTATTCGAGTAGCACTTTAAAATGATTTGTGCTTGAGTGAACAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS-3UTR CAA 90 bp GATGCCTCATTTCCAAGTAATACTTTTTATAGCCCTGAAAATGGAAACCTTGGCGAGTTTGAGAAAGATTaGACTGAAGAAGGGCATTTC +
Preference number: 5 (lower is better)
Translates to: DASFPSNTFYSPENGNLGEFEKD*TEEGHF
Trigger: GAAATGCCCTTCTTCAGTCAAATCTTTCTCAAACTC...GCCAAGGTTTCCATTTTCAGGGCTATAAAAAGTATTACTTGGAAATGAGGCATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CAA 90 bp TTTCACTGTTTCACAGTTCCTCCAGAGATACCAGTTTATGAAAATGTCAGATGTCTCAGTCTTTTGAGTTaGCTTTTTGAGTCGGACATC +
Preference number: 5 (lower is better)
Translates to: FHCFTVPPEIPVYENVRCLSLLS*LFESDI
Trigger: GATGTCCGACTCAAAAAGCAAACTCAAAAGACTGAG...ACATCTGACATTTTCATAAACTGGTATCTCTGGAGGAACTGTGAAACAGTGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS-3UTR CAA 90 bp TTGTTCACTCAAGCACAAATCATTTTAAAGTGCTACTCGAATAAGGATAGCTGTCTTGCTTTGCTTTCCTaGCAGCCTCATCTTCTAGTT +
Preference number: 5 (lower is better)
Translates to: LFTQAQIILKCYSNKDSCLALLS*QPHLLV
Trigger: AACTAGAAGATGAGGCTGCAAGGAAAGCAAAGCAAG...ACAGCTATCCTTATTCGAGTAGCACTTTAAAATGATTTGTGCTTGAGTGAACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS-3UTR CAA 90 bp GTACTATGGGGTTTGGTTTCTTTATGGGAAAGGTGTTTGCATAGATTGCTAGCTCTCTTTCCATTTGGTTaGCAGGCTTTTAATTCTGTA +
Preference number: 5 (lower is better)
Translates to: VLWGLVSLWERCLHRLLALFPFG*QAFNSV
Trigger: TACAGAATTAAAAGCCTGCAAACCAAATGGAAAGAG...AGCTAGCAATCTATGCAAACACCTTTCCCATAAAGAAACCAAACCCCATAGTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000427234.5
ENST00000622089.4
CDS-3UTR CAA 90 bp CAGTATGGGTTGCTCTTTCCATTTGGTTTGCAGGCTTTTAATTCTGTAGCTTCACTCTTTCCATTTGGTTaGCAGGCTTTTAATTCTGTA +
Preference number: 5 (lower is better)
Translates to: QYGLLFPFGLQAFNSVASLFPFG*QAFNSV
Trigger: TACAGAATTAAAAGCCTGCAAACCAAATGGAAAGAG...TGAAGCTACAGAATTAAAAGCCTGCAAACCAAATGGAAAGAGCAACCCATACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427234.5
ENST00000449392.1
CDS-3UTR CAA 90 bp GATGCCTCATTTCCAAGTAATACTTTTTATAGCCCTGAAAATGGAAACCTTGGCCTGAAAATGGAAACCTaGGCATCTAAACAAACAGAG +
Preference number: 5 (lower is better)
Translates to: DASFPSNTFYSPENGNLGLKMET*ASKQTE
Trigger: CTCTGTTTGTTTAGATGCCAAGGTTTCCATTTTCAG...GCCAAGGTTTCCATTTTCAGGGCTATAAAAAGTATTACTTGGAAATGAGGCATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000427234.5
ENST00000622089.4
CDS-3UTR CAA 90 bp ACTCAAGCACAAATCATTTTAAAGTGCTACTCGAATAAGGATAGCTGTCATCAGGAGTTTGAGAAAGATTaGACTGAAGAAGGGCATTTC +
Preference number: 5 (lower is better)
Translates to: TQAQIILKCYSNKDSCHQEFEKD*TEEGHF
Trigger: GAAATGCCCTTCTTCAGTCAAATCTTTCTCAAACTC...CTGATGACAGCTATCCTTATTCGAGTAGCACTTTAAAATGATTTGTGCTTGAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS-3UTR CAA 90 bp CTCTTTCTGTACATATGGGCAATGATAAAGCTTAAAGATGCATGTCCTAAGAAACTCAGTCTTTTGAGTTaGCTTTTTGAGTCGGACATC +
Preference number: 5 (lower is better)
Translates to: LFLYIWAMIKLKDACPKKLSLLS*LFESDI
Trigger: GATGTCCGACTCAAAAAGCAAACTCAAAAGACTGAG...TTTCTTAGGACATGCATCTTTAAGCTTTATCATTGCCCATATGTACAGAAAGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CAA 90 bp ATGATCAAGTTTCTGTTTTTATTCAGTGCACGAGTAGACGCTATTTCAGTATCACTCCAGGTTCCACACTaGAATATGGATAAAGTGCAA +
Preference number: 5 (lower is better)
Translates to: MIKFLFLFSARVDAISVSLQVPH*NMDKVQ
Trigger: TTGCACTTTATCCATATTCAAGTGTGGAACCTGGAG...TGATACTGAAATAGCGTCTACTCGTGCACTGAATAAAAACAGAAACTTGATCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CAA 90 bp TTGTTCACTCAAGCACAAATCATTTTAAAGTGCTACTCGAATAAGGATAGCTGTTTGTTCTCTATTCTTTaGATTGAGAAGCTCCTGTCG +
Preference number: 5 (lower is better)
Translates to: LFTQAQIILKCYSNKDSCLFSIL*IEKLLS
Trigger: CGACAGGAGCTTCTCAATCAAAAGAATAGAGAACAA...ACAGCTATCCTTATTCGAGTAGCACTTTAAAATGATTTGTGCTTGAGTGAACAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406921.7
CDS-3UTR CAA 90 bp CTCTTTCTGTACATATGGGCAATGATAAAGCTTAAAGATGCATGTCCTAAGAAAACTCCCAAAACTCTCTaGATCCTTTGGTTTGACATA +
Preference number: 5 (lower is better)
Translates to: LFLYIWAMIKLKDACPKKTPKTL*ILWFDI
Trigger: TATGTCAAACCAAAGGATCAAGAGAGTTTTGGGAGT...TTTCTTAGGACATGCATCTTTAAGCTTTATCATTGCCCATATGTACAGAAAGAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CAA 90 bp ATGATCAAGTTTCTGTTTTTATTCAGTGCACGAGTAGACGCTATTTCAGTATCAACTCCCAAAACTCTCTaGATCCTTTGGTTTGACATA +
Preference number: 5 (lower is better)
Translates to: MIKFLFLFSARVDAISVSTPKTL*ILWFDI
Trigger: TATGTCAAACCAAAGGATCAAGAGAGTTTTGGGAGT...TGATACTGAAATAGCGTCTACTCGTGCACTGAATAAAAACAGAAACTTGATCAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CAA 90 bp CTCTTTCTGTACATATGGGCAATGATAAAGCTTAAAGATGCATGTCCTAAGAAACATAACATTAATGAGTaGTCCCTTGGAGAAACTGAG +
Preference number: 5 (lower is better)
Translates to: LFLYIWAMIKLKDACPKKHNINE*SLGETE
Trigger: CTCAGTTTCTCCAAGGGACAACTCATTAATGTTATG...TTTCTTAGGACATGCATCTTTAAGCTTTATCATTGCCCATATGTACAGAAAGAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS-3UTR CAA 90 bp ATGATCAAGTTTCTGTTTTTATTCAGTGCACGAGTAGACGCTATTTCAGTATCACTTGCCACCACCCACTaGTATTTTTCTTTAGAATTA +
Preference number: 5 (lower is better)
Translates to: MIKFLFLFSARVDAISVSLATTH*YFSLEL
Trigger: TAATTCTAAAGAAAAATACAAGTGGGTGGTGGCAAG...TGATACTGAAATAGCGTCTACTCGTGCACTGAATAAAAACAGAAACTTGATCAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS CAA 90 bp GCCACTGCAGCTGGCTTGGTCGTCAGGCCGCCGCCCGCGAACCTGTaGCGTAGCCTGTCACAGCCGCTCAGGGCTCCGCCGGCGCCGCCT +
Preference number: 6 (lower is better)
Translates to: ATAAGLVVRPPPANL*RSLSQPLRAPPAPP
Trigger: AGGCGGCGCCGGCGGAGCCCTGAGCGGCTGTGACAGGCTACGCAACAGGTTCGCGGGCGGCGGCCTGACGACCAAGCCAGCTGCAGTGGC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000406921.7
ENST00000412011.5
CDS CAA 90 bp GCGGGGAGACCCTGCTCTGCCGCCGTCGCCGCCACTGCAGCTGGCTaGGTCGTCAGGCCGCCGCCCGCGAACCTGTTGCGTAGCCTGTCA +
Preference number: 6 (lower is better)
Translates to: AGRPCSAAVAATAAG*VVRPPPANLLRSLS
Trigger: TGACAGGCTACGCAACAGGTTCGCGGGCGGCGGCCTGACGACCAAGCCAGCTGCAGTGGCGGCGACGGCGGCAGAGCAGGGTCTCCCCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355123.9
ENST00000406921.7
ENST00000412011.5
ENST00000443927.5
CDS GCA 72 bp CTGGCTTGGTCGTCAGGCCGCCGCCCGCGAACCTGTTaGGTAGCCTGTCACAGCCGCTCAGGGCTCCGCCGG +
Preference number: 6 (lower is better)
Translates to: LAWSSGRRPRTC*VACHSRSGLRR
Trigger: CCGGCGGAGCCCTGAGCGGCTGTGACAGGCTACGCAACAGGTTCGCGGGCGGCGGCCTGACGACCAAGCCAG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000406921.7
ENST00000412011.5
CDS CCA 72 bp CCTGCTCTGCCGCCGTCGCCGCCACTGCAGCTGGCTTaGTCGTCAGGCCGCCGCCCGCGAACCTGTTGCGTA +
Preference number: 6 (lower is better)
Translates to: PALPPSPPLQLA*SSGRRPRTCCV
Trigger: TACGCAACAGGTTCGCGGGCGGCGGCCTGACGACCAAGCCAGCTGCAGTGGCGGCGACGGCGGCAGAGCAGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355123.9
ENST00000406921.7
ENST00000407704.1
ENST00000412011.5
ENST00000443927.5
CDS CCA 72 bp GAGACCCTGCTCTGCCGCCGTCGCCGCCACTGCAGCTaGCTTGGTCGTCAGGCCGCCGCCCGCGAACCTGTT +
Preference number: 6 (lower is better)
Translates to: ETLLCRRRRHCS*LGRQAAAREPV
Trigger: AACAGGTTCGCGGGCGGCGGCCTGACGACCAAGCCAGCTGCAGTGGCGGCGACGGCGGCAGAGCAGGGTCTC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355123.9
ENST00000406921.7
ENST00000407704.1
ENST00000412011.5
ENST00000443927.5
CDS CAA 72 bp GCTGGCTTGGTCGTCAGGCCGCCGCCCGCGAACCTGTaGCGTAGCCTGTCACAGCCGCTCAGGGCTCCGCCG +
Preference number: 6 (lower is better)
Translates to: AGLVVRPPPANL*RSLSQPLRAPP
Trigger: CGGCGGAGCCCTGAGCGGCTGTGACAGGCTACGCAACAGGTTCGCGGGCGGCGGCCTGACGACCAAGCCAGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000406921.7
ENST00000412011.5
CDS CCA 72 bp ACACTACCGGCTCCCTGTCCCCATCTGCCACTGCCCTaGGCCCAACAGCCCAGCATCTGGCTGCCCTGTGCC +
Preference number: 6 (lower is better)
Translates to: TLPAPCPHLPLP*AQQPSIWLPCA
Trigger: GGCACAGGGCAGCCAGATGCTGGGCTGTTGGGCCCAGGGCAGTGGCAGATGGGGACAGGGAGCCGGTAGTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478720.1
CDS CCA 72 bp TCCTCTGCCCGCTCGAGGGCCAGCTTTAGGGAGGAATaGTCTGCATGGCTCTCCGGGGTGTTCTCCAGAATA +
Preference number: 6 (lower is better)
Translates to: SSARSRASFREE*SAWLSGVFSRI
Trigger: TATTCTGGAGAACACCCCGGAGAGCCATGCAGACCATTCCTCCCTAAAGCTGGCCCTCGAGCGGGCAGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS CAA 72 bp TGTGGGAAACTGAGCCATCATGGTCCTGAGTTTTCCTaGCTAGCTCTCAGCCATCTGGCGCCCTCGCCGCGC +
Preference number: 6 (lower is better)
Translates to: CGKLSHHGPEFS*LALSHLAPSPR
Trigger: GCGCGGCGAGGGCGCCAGATGGCTGAGAGCTAGCAAGGAAAACTCAGGACCATGATGGCTCAGTTTCCCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355123.9
ENST00000406921.7
ENST00000407704.1
ENST00000412011.5
ENST00000443927.5
CDS GCA 72 bp GATCCCACATCTACCTCCCAGATCCCTTCCCTCCTCTaGATCCAGTATCCCTCGCTTATGAGCAGCCCACAG +
Preference number: 6 (lower is better)
Translates to: DPTSTSQIPSLL*IQYPSLMSSPQ
Trigger: CTGTGGGCTGCTCATAAGCGAGGGATACTGGATGCAGAGGAGGGAAGGGATCTGGGAGGTAGATGTGGGATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478720.1
CDS CCA 72 bp CGCTCGAGGGCCAGCTTTAGGGAGGAATGGTCTGCATaGCTCTCCGGGGTGTTCTCCAGAATACTTCTGATG +
Preference number: 6 (lower is better)
Translates to: RSRASFREEWSA*LSGVFSRILLM
Trigger: CATCAGAAGTATTCTGGAGAACACCCCGGAGAGCCATGCAGACCATTCCTCCCTAAAGCTGGCCCTCGAGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000622089.4
CDS CCA 72 bp GATGACACAGGCCTGTGTCACTTCCCTGAAGTGGCATaGGGTCTGCACACAGCTGAAGCCCCTAGATCTGGA +
Preference number: 6 (lower is better)
Translates to: DDTGLCHFPEVA*GLHTAEAPRSG
Trigger: TCCAGATCTAGGGGCTTCAGCTGTGTGCAGACCCCATGCCACTTCAGGGAAGTGACACAGGCCTGTGTCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478720.1
CDS TCA 72 bp CACGTCGTGTGTGTAGGGAGTGATGGGTCAAAGACCTaGAACACATCTCAGGCCACCTCCTCCCCTGAGGAA +
Preference number: 6 (lower is better)
Translates to: HVVCVGSDGSKT*NTSQATSSPEE
Trigger: TTCCTCAGGGGAGGAGGTGGCCTGAGATGTGTTTCAGGTCTTTGACCCATCACTCCCTACACACACGACGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478720.1
CDS TCA 72 bp CCGTCAGCATCCTACTCATCCTTCAAGATGCAGGTCTaGTCCCACATCTACCTCCCAGATCCCTTCCCTCCT +
Preference number: 6 (lower is better)
Translates to: PSASYSSFKMQV*SHIYLPDPFPP
Trigger: AGGAGGGAAGGGATCTGGGAGGTAGATGTGGGATCAGACCTGCATCTTGAAGGATGAGTAGGATGCTGACGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478720.1
CDS TCA 72 bp CTCCAGGAGTGGTGTTCACGTCGTGTGTGTAGGGAGTaGTGGGTCAAAGACCTGAAACACATCTCAGGCCAC +
Preference number: 6 (lower is better)
Translates to: LQEWCSRRVCRE*WVKDLKHISGH
Trigger: GTGGCCTGAGATGTGTTTCAGGTCTTTGACCCATCACTCCCTACACACACGACGTGAACACCACTCCTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478720.1
CDS GCA 72 bp GTGTCGATGTACTGCTCAGACGCCGCCTTGATCTTCTaGACCCAGGCGGTCCTCTCATTAATGTTGTCTGTT +
Preference number: 6 (lower is better)
Translates to: VSMYCSDAALIF*TQAVLSLMLSV
Trigger: AACAGACAACATTAATGAGAGGACCGCCTGGGTGCAGAAGATCAAGGCGGCGTCTGAGCAGTACATCGACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000479575.1
ENST00000622089.4
CDS CAA 90 bp CCACTCTTCCTTTTCTTTCTGGGCTTTACGTTCTGCCTCCCTTTGTaGCTGCTCCATCAAGGCTTGGCGTCGCTTTTCCAGCTCCATGTT +
Preference number: 6 (lower is better)
Translates to: PLFLFFLGFTFCLPL*LLHQGLASLFQLHV
Trigger: AACATGGAGCTGGAAAAGCGACGCCAAGCCTTGATGGAGCAGCAACAAAGGGAGGCAGAACGTAAAGCCCAGAAAGAAAAGGAAGAGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000406921.7
ENST00000412011.5
ENST00000622089.4
CDS TCA 72 bp AGCTTCAATGACATGCACCATCAGGCGCCCAATGCCTaGAGTCTTTTGGGAGCGGGCTACAAAAGAGGAAGA +
Preference number: 6 (lower is better)
Translates to: SFNDMHHQAPNA*SLLGAGYKRGR
Trigger: TCTTCCTCTTTTGTAGCCCGCTCCCAAAAGACTTCAGGCATTGGGCGCCTGATGGTGCATGTCATTGAAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478720.1
CDS GCA 72 bp TTTTCTTTCTGGGCTTTACGTTCTGCCTCCCTTTGTTaGTGCTCCATCAAGGCTTGGCGTCGCTTTTCCAGC +
Preference number: 6 (lower is better)
Translates to: FSFWALRSASLC*CSIKAWRRFSS
Trigger: GCTGGAAAAGCGACGCCAAGCCTTGATGGAGCAGCAACAAAGGGAGGCAGAACGTAAAGCCCAGAAAGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000406921.7
ENST00000412011.5
ENST00000622089.4
CDS CCA 72 bp ACATGCACCATCAGGCGCCCAATGCCTGAAGTCTTTTaGGAGCGGGCTACAAAAGAGGAAGACAAGTCTCAT +
Preference number: 6 (lower is better)
Translates to: TCTIRRPMPEVF*ERATKEEDKSH
Trigger: ATGAGACTTGTCTTCCTCTTTTGTAGCCCGCTCCCAAAAGACTTCAGGCATTGGGCGCCTGATGGTGCATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478720.1
CDS CAA 72 bp CTTTTCTTTCTGGGCTTTACGTTCTGCCTCCCTTTGTaGCTGCTCCATCAAGGCTTGGCGTCGCTTTTCCAG +
Preference number: 6 (lower is better)
Translates to: LFFLGFTFCLPL*LLHQGLASLFQ
Trigger: CTGGAAAAGCGACGCCAAGCCTTGATGGAGCAGCAACAAAGGGAGGCAGAACGTAAAGCCCAGAAAGAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000406921.7
ENST00000412011.5
ENST00000622089.4
CDS CAA 90 bp CTAACAGAAGGCACTAGGGGAGTGGGCATCATTAAGGGAGGAAGGTaGGTCCCTGAAGTCGCAGAAGACAATGATGTTATAGGTGCAGCT +
Preference number: 6 (lower is better)
Translates to: LTEGTRGVGIIKGGR*VPEVAEDNDVIGAA
Trigger: AGCTGCACCTATAACATCATTGTCTTCTGCGACTTCAGGGACCAACCTTCCTCCCTTAATGATGCCCACTCCCCTAGTGCCTTCTGTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000406921.7
ENST00000412011.5
ENST00000443927.5
ENST00000622089.4
CDS TCA 72 bp CACATGTTTGGCCCTCCATTCATAGCTGTGGGAAACTaGGCCATCATGGTCCTGAGTTTTCCTTGGCTCTCA +
Preference number: 6 (lower is better)
Translates to: HMFGPPFIAVGN*AIMVLSFPWLS
Trigger: TGAGAGCCAAGGAAAACTCAGGACCATGATGGCTCAGTTTCCCACAGCTATGAATGGAGGGCCAAACATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622089.4
CDS GCA 72 bp GTGTCGATGTACTGCTCAGACGCCGCCTTGATCTTCTaGACCCAGGCGGTCCGTTTTATACATTTTGAATTG +
Preference number: 6 (lower is better)
Translates to: VSMYCSDAALIF*TQAVRFIHFEL
Trigger: CAATTCAAAATGTATAAAACGGACCGCCTGGGTGCAGAAGATCAAGGCGGCGTCTGAGCAGTACATCGACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427234.5
CDS CCA 72 bp GTGCAGCTGGAGGCAATGGCTGAGGAATGGACAGATTaGGCATGCTTCCCATTCCAAAACGAGCAGAAATTA +
Preference number: 6 (lower is better)
Translates to: VQLEAMAEEWTD*ACFPFQNEQKL
Trigger: TAATTTCTGCTCGTTTTGGAATGGGAAGCATGCCCAATCTGTCCATTCCTCAGCCATTGCCTCCAGCTGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000406921.7
ENST00000412011.5
ENST00000443927.5
ENST00000622089.4
CDS CCA 72 bp AAATGTGGAAGACAGGCTCATCGCTGGAAGGGTCTGTaGGCAGTTTCACCAAGACTTCATTCAGGAAAATGG +
Preference number: 6 (lower is better)
Translates to: KCGRQAHRWKGL*AVSPRLHSGKW
Trigger: CCATTTTCCTGAATGAAGTCTTGGTGAAACTGCCCACAGACCCTTCCAGCGATGAGCCTGTCTTCCACATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000479575.1
ENST00000622089.4
CDS CAA 90 bp CGGTCTGAATCAGCTCATGAATATAGCCCTGTCTTTTCCTCTCAATaGGCTGCATTGTGTCCAGGGTTTGCAGATCAGCACACCACTGTT +
Preference number: 6 (lower is better)
Translates to: RSESAHEYSPVFSSQ*AALCPGFADQHTTV
Trigger: AACAGTGGTGTGCTGATCTGCAAACCCTGGACACAATGCAGCCAATTGAGAGGAAAAGACAGGGCTATATTCATGAGCTGATTCAGACCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000406921.7
ENST00000622089.4
CDS CAA 90 bp TCAGCTCATGAATATAGCCCTGTCTTTTCCTCTCAATTGGCTGCATaGTGTCCAGGGTTTGCAGATCAGCACACCACTGTTGACTTGGAT +
Preference number: 6 (lower is better)
Translates to: SAHEYSPVFSSQLAA*CPGFADQHTTVDLD
Trigger: ATCCAAGTCAACAGTGGTGTGCTGATCTGCAAACCCTGGACACAATGCAGCCAATTGAGAGGAAAAGACAGGGCTATATTCATGAGCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000406921.7
ENST00000622089.4
CDS GCA 72 bp CTCCAGCTCCTACTAGATCCTAAATCAATCAGAGACTaGGCTTTCTGTATACTAGCACCTCCAAATCCTCCC +
Preference number: 6 (lower is better)
Translates to: LQLLLDPKSIRD*AFCILAPPNPP
Trigger: GGGAGGATTTGGAGGTGCTAGTATACAGAAAGCGCAGTCTCTGATTGATTTAGGATCTAGTAGGAGCTGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412011.5
CDS CAA 72 bp GAATATAGCCCTGTCTTTTCCTCTCAATTGGCTGCATaGTGTCCAGGGTTTGCAGATCAGCACACCACTGTT +
Preference number: 6 (lower is better)
Translates to: EYSPVFSSQLAA*CPGFADQHTTV
Trigger: AACAGTGGTGTGCTGATCTGCAAACCCTGGACACAATGCAGCCAATTGAGAGGAAAAGACAGGGCTATATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000406921.7
ENST00000622089.4
CDS CAA 90 bp CCAGTCACCCCGTTGATCTCTCCTTGCCACCAATCAGGATCATCTTaGTTCATAACATTAATGAGTTGTCCCTTGGAGAAACTGAGCTCA +
Preference number: 6 (lower is better)
Translates to: PVTPLISPCHQSGSS*FITLMSCPLEKLSS
Trigger: TGAGCTCAGTTTCTCCAAGGGACAACTCATTAATGTTATGAACAAAGATGATCCTGATTGGTGGCAAGGAGAGATCAACGGGGTGACTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000406921.7
ENST00000416160.1
ENST00000622089.4
CDS TCA 72 bp AGTTTGCTTTTTGAGTCGGACATCCTGAAGTCTGCCTaGGATCTGCTGATGTTTGCCATTCAGTGCTTCCAA +
Preference number: 6 (lower is better)
Translates to: SLLFESDILKSA*DLLMFAIQCFQ
Trigger: TTGGAAGCACTGAATGGCAAACATCAGCAGATCTCAGGCAGACTTCAGGATGTCCGACTCAAAAAGCAAACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000406921.7
ENST00000412011.5
ENST00000622089.4
CDS CCA 72 bp TACAGGATGAAAGGCAGGTGTGGCTCTTTCACTACTTaGACCCAAAAGTTTAACATGACTGGCAGGAAACCA +
Preference number: 6 (lower is better)
Translates to: YRMKGRCGSFTT*TQKFNMTGRKP
Trigger: TGGTTTCCTGCCAGTCATGTTAAACTTTTGGGTCCAAGTAGTGAAAGAGCCACACCTGCCTTTCATCCTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000406921.7
ENST00000416160.1
ENST00000622089.4
CDS CAA 90 bp GTACGTTCTTCAGAGGTAATAGCCCACATGTTTGGCCCTCCTTTATaGAACCCTGACTATTGTCAGGGACTTTATATGCAGCAACTCACT +
Preference number: 6 (lower is better)
Translates to: VRSSEVIAHMFGPPL*NPDYCQGLYMQQLT
Trigger: AGTGAGTTGCTGCATATAAAGTCCCTGACAATAGTCAGGGTTCAATAAAGGAGGGCCAAACATGTGGGCTATTACCTCTGAAGAACGTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443927.5
CDS TCA 72 bp AATAGCCCACATGTTTGGCCCTCCTTTATTGAACCCTaGCTATTGTCAGGGACTTTATATGCAGCAACTCAC +
Preference number: 6 (lower is better)
Translates to: NSPHVWPSFIEP*LLSGTLYAATH
Trigger: GTGAGTTGCTGCATATAAAGTCCCTGACAATAGTCAGGGTTCAATAAAGGAGGGCCAAACATGTGGGCTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443927.5
CDS GCA 72 bp GAAGTTGAGCTACTAGATCCTAAATCAATCAGAGACTaGGCTTTCTGTATACTAGCACCTCCAAATCCTCCC +
Preference number: 6 (lower is better)
Translates to: EVELLDPKSIRD*AFCILAPPNPP
Trigger: GGGAGGATTTGGAGGTGCTAGTATACAGAAAGCGCAGTCTCTGATTGATTTAGGATCTAGTAGCTCAACTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000406921.7
ENST00000622089.4
CDS GCA 72 bp GGTAATGGCTGTCCAGCTTTGGCCATGTCAGTAAGGTaGATTGCAAGAATAAACTCTTCTGCTTTTAGCTGT +
Preference number: 6 (lower is better)
Translates to: GNGCPALAMSVR*IARINSSAFSC
Trigger: ACAGCTAAAAGCAGAAGAGTTTATTCTTGCAATGCACCTTACTGACATGGCCAAAGCTGGACAGCCATTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000406921.7
ENST00000412011.5
ENST00000622089.4
CDS CAA 72 bp TCAGAGGTAATAGCCCACATGTTTGGCCCTCCTTTATaGAACCCTGACTATTGTCAGGGACTTTATATGCAG +
Preference number: 6 (lower is better)
Translates to: SEVIAHMFGPPL*NPDYCQGLYMQ
Trigger: CTGCATATAAAGTCCCTGACAATAGTCAGGGTTCAATAAAGGAGGGCCAAACATGTGGGCTATTACCTCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443927.5
CDS TCA 72 bp GTATTAAATTTTTGCCGATATTTTAATCTTGTAGGCTaGGGAACTGCCCACTCTGAGGTCCCAGTCTTGGGT +
Preference number: 6 (lower is better)
Translates to: VLNFCRYFNLVG*GTAHSEVPVLG
Trigger: ACCCAAGACTGGGACCTCAGAGTGGGCAGTTCCTCAGCCTACAAGATTAAAATATCGGCAAAAATTTAATAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000406921.7
ENST00000412011.5
ENST00000622089.4
CDS GCA 72 bp AAACGAGCAGAAATTAATGGAGAAAACATAGGGGGTTaGTTCATAATAGGAGGGAGAACCACAGGCAACTGT +
Preference number: 6 (lower is better)
Translates to: KRAEINGENIGG*FIIGGRTTGNC
Trigger: ACAGTTGCCTGTGGTTCTCCCTCCTATTATGAAGCAACCCCCTATGTTTTCTCCATTAATTTCTGCTCGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000406921.7
ENST00000407704.1
ENST00000412011.5
ENST00000443927.5
ENST00000622089.4
CDS GCA 72 bp CTCCTTTCTTCCTCTCGTTGTCTCTCCAATTCCCGTTaGTTCTCTAAGCGTTTTTCTAATTCAAGTTGTTTC +
Preference number: 6 (lower is better)
Translates to: LLSSSRCLSNSR*FSKRFSNSSCF
Trigger: GAAACAACTTGAATTAGAAAAACGCTTAGAGAAGCAACGGGAATTGGAGAGACAACGAGAGGAAGAAAGGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000406921.7
ENST00000412011.5
ENST00000622089.4
CDS TCA 72 bp AAAATTACGTGCTTGATCACCTGTTATGTAACCTCCTaGAGGTTTGAGGTTATCAAACTGCCTGTCATGCTT +
Preference number: 6 (lower is better)
Translates to: KITCLITCYVTS*RFEVIKLPVML
Trigger: AAGCATGACAGGCAGTTTGATAACCTCAAACCTTCAGGAGGTTACATAACAGGTGATCAAGCACGTAATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000406921.7
ENST00000407704.1
ENST00000412011.5
ENST00000443927.5
ENST00000622089.4
CDS CAA 90 bp TCCTTGCCACCAATCAGGATCATCTTTGTTCATAACATTAATGAGTaGTCCCTTGGAGAAACTGAGCTCATCTTCATTATTTGCTGCATA +
Preference number: 6 (lower is better)
Translates to: SLPPIRIIFVHNINE*SLGETELIFIICCI
Trigger: TATGCAGCAAATAATGAAGATGAGCTCAGTTTCTCCAAGGGACAACTCATTAATGTTATGAACAAAGATGATCCTGATTGGTGGCAAGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000406921.7
ENST00000416160.1
ENST00000622089.4
CDS CAA 72 bp TTCTACATAATTGCATGGAAACCAGCCAAAATTTCCTaGAAAACTACCATAAAGCCAACCAGGTTCTCCTAC +
Preference number: 6 (lower is better)
Translates to: FYIIAWKPAKIS*KTTIKPTRFSY
Trigger: GTAGGAGAACCTGGTTGGCTTTATGGTAGTTTTCAAGGAAATTTTGGCTGGTTTCCATGCAATTATGTAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000406921.7
ENST00000622089.4
CDS TCA 72 bp ACCTTCTGTGAAAGTCAAATCTCCAGGTTCCACACTTaGATATGGATAAAGTGCAATATATTCTTCTCCAAC +
Preference number: 6 (lower is better)
Translates to: TFCESQISRFHT*IWIKCNIFFSN
Trigger: GTTGGAGAAGAATATATTGCACTTTATCCATATTCAAGTGTGGAACCTGGAGATTTGACTTTCACAGAAGGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000406921.7
ENST00000622089.4
CDS CAA 72 bp CCAATCAGGATCATCTTTGTTCATAACATTAATGAGTaGTCCCTTGGAGAAACTGAGCTCATCTTCATTATT +
Preference number: 6 (lower is better)
Translates to: PIRIIFVHNINE*SLGETELIFII
Trigger: AATAATGAAGATGAGCTCAGTTTCTCCAAGGGACAACTCATTAATGTTATGAACAAAGATGATCCTGATTGG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355123.9
ENST00000361999.7
ENST00000406921.7
ENST00000416160.1
ENST00000622089.4