RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ITSN1 (Homo sapiens)

Ensembl gene IDs: ENSG00000205726

Ensembl transcript IDs: ENST00000379960.9, ENST00000381283.7, ENST00000381284.7, ENST00000381285.8, ENST00000381291.8, ENST00000381318.8, ENST00000399338.8, ENST00000399349.5, ENST00000399352.5, ENST00000399353.5, ENST00000399355.6, ENST00000399367.7, ENST00000419241.1, ENST00000420666.1, ENST00000437126.5, ENST00000440794.2, ENST00000444491.5, ENST00000451686.5, ENST00000456489.1, ENST00000462212.5, ENST00000465143.1, ENST00000470742.5, ENST00000474132.1, ENST00000475422.5, ENST00000479424.5, ENST00000487427.5, ENST00000488166.1, ENST00000489261.1

Found 2133 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTCTCCGAAGCAGGTTCCTCCCAGACACCCGCAGACCAGATCGTGTaGCCCAGCTGGGCAGGGAGGCACTGGCTCCGCAGACTCCCCTTC +
Preference number: 1 (lower is better)
Translates to: LSEAGSSQTPADQIV*PSWAGRHWLRRLPF
Trigger: GAAGGGGAGTCTGCGGAGCCAGTGCCTCCCTGCCCAGCTGGGCCACACGATCTGGTCTGCGGGTGTCTGGGAGGAACCTGCTTCGGAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR GCA 90 bp GACGGGGAGGAGCCAGTGGCCGTGGCTGGAGTAAAGGCGGACCTCTaGCTTAACTGGCCGGCACTTGGAACGGTGAGAGAGGGCTGGGCT +
Preference number: 1 (lower is better)
Translates to: DGEEPVAVAGVKADL*LNWPALGTVREGWA
Trigger: AGCCCAGCCCTCTCTCACCGTTCCAAGTGCCGGCCAGTTAAGGCAGAGGTCCGCCTTTACTCCAGCCACGGCCACTGGCTCCTCCCCGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379960.9
ENST00000419241.1
3UTR CCA 90 bp GAGCCAGTGGCCGTGGCTGGAGTAAAGGCGGACCTCTGCCTTAACTaGCCGGCACTTGGAACGGTGAGAGAGGGCTGGGCTGCCCATGCA +
Preference number: 1 (lower is better)
Translates to: EPVAVAGVKADLCLN*PALGTVREGWAAHA
Trigger: TGCATGGGCAGCCCAGCCCTCTCTCACCGTTCCAAGTGCCGGCCAGTTAAGGCAGAGGTCCGCCTTTACTCCAGCCACGGCCACTGGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379960.9
ENST00000419241.1
3UTR TCA 90 bp AGACAGCATGTGTGGCCGTGGGCTGGGACCCTGCTGAGCACACCCTaGGCCCGCTGCCTACGGCTCATCAAACAACTGCAGGTCCAAGCG +
Preference number: 1 (lower is better)
Translates to: RQHVWPWAGTLLSTP*ARCLRLIKQLQVQA
Trigger: CGCTTGGACCTGCAGTTGTTTGATGAGCCGTAGGCAGCGGGCTCAGGGTGTGCTCAGCAGGGTCCCAGCCCACGGCCACACATGCTGTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381285.8
3UTR TCA 90 bp CCCAGCCGACAGACACTAAAGCTGATGCAGAAAGGGTGGGAAGCCTaGGGACCTCCGTGCAGCCCCAGCCTCAGCGGCAGGGAAGAGCAA +
Preference number: 1 (lower is better)
Translates to: PSRQTLKLMQKGWEA*GPPCSPSLSGREEQ
Trigger: TTGCTCTTCCCTGCCGCTGAGGCTGGGGCTGCACGGAGGTCCTCAGGCTTCCCACCCTTTCTGCATCAGCTTTAGTGTCTGTCGGCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR GCA 90 bp GTTCCTGGAGAGACAGCCGGCCTGCTTAGCCTTGGAAGGCAGACCTaGAAGTGTCCTTCCCTGCTGGCGCTAGCACCTAATCCCCCTGCC +
Preference number: 1 (lower is better)
Translates to: VPGETAGLLSLGRQT*KCPSLLALAPNPPA
Trigger: GGCAGGGGGATTAGGTGCTAGCGCCAGCAGGGAAGGACACTTGCAGGTCTGCCTTCCAAGGCTAAGCAGGCCGGCTGTCTCTCCAGGAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR GCA 90 bp CCCTCCACCCCCGCCGGTGACAGTGCACAGAATGGCAGCGGCTGCTaGTCACCCAACGCTGCAAAGCCACTACACCCTTTCTTTGGTTCC +
Preference number: 1 (lower is better)
Translates to: PSTPAGDSAQNGSGC*SPNAAKPLHPFFGS
Trigger: GGAACCAAAGAAAGGGTGTAGTGGCTTTGCAGCGTTGGGTGAGCAGCAGCCGCTGCCATTCTGTGCACTGTCACCGGCGGGGGTGGAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR GCA 90 bp AGGGCCGGCCTCCTGGGTGTGCTGCCTGGCAGCCACAAGGGGCTATaGACTCAGAAGGGACCTGAGCTTGGCTTAATGCTCTCCTCTCAC +
Preference number: 1 (lower is better)
Translates to: RAGLLGVLPGSHKGL*TQKGPELGLMLSSH
Trigger: GTGAGAGGAGAGCATTAAGCCAAGCTCAGGTCCCTTCTGAGTGCATAGCCCCTTGTGGCTGCCAGGCAGCACACCCAGGAGGCCGGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR GCA 90 bp AGACCCTCCACCCCCGCCGGTGACAGTGCACAGAATGGCAGCGGCTaGTGCTCACCCAACGCTGCAAAGCCACTACACCCTTTCTTTGGT +
Preference number: 1 (lower is better)
Translates to: RPSTPAGDSAQNGSG*CSPNAAKPLHPFFG
Trigger: ACCAAAGAAAGGGTGTAGTGGCTTTGCAGCGTTGGGTGAGCAGCAGCCGCTGCCATTCTGTGCACTGTCACCGGCGGGGGTGGAGGGTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR CCA 90 bp ATGCAAACGGGCCTAAGACTGCTTCTCCTGGAATGGGCTGACCTGTaGGTCCCCCAGGAGGAAGCTGCAGGGAATGCATCCCTTGGCCCC +
Preference number: 1 (lower is better)
Translates to: MQTGLRLLLLEWADL*VPQEEAAGNASLGP
Trigger: GGGGCCAAGGGATGCATTCCCTGCAGCTTCCTCCTGGGGGACCCACAGGTCAGCCCATTCCAGGAGAAGCAGTCTTAGGCCCGTTTGCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR CCA 90 bp CAGTGGCAGGGGATGCAAACGGGCCTAAGACTGCTTCTCCTGGAATaGGCTGACCTGTGGGTCCCCCAGGAGGAAGCTGCAGGGAATGCA +
Preference number: 1 (lower is better)
Translates to: QWQGMQTGLRLLLLE*ADLWVPQEEAAGNA
Trigger: TGCATTCCCTGCAGCTTCCTCCTGGGGGACCCACAGGTCAGCCCATTCCAGGAGAAGCAGTCTTAGGCCCGTTTGCATCCCCTGCCACTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR TCA 90 bp CCTAGCAGCTGCGGTAGGTGGAGCCGGCACCTTGAAATCTGCCAGTaGAAACAGCGAGTTTCCTCCTCCTACAGGGAGACCCTCCACCCC +
Preference number: 1 (lower is better)
Translates to: PSSCGRWSRHLEICQ*KQRVSSSYRETLHP
Trigger: GGGGTGGAGGGTCTCCCTGTAGGAGGAGGAAACTCGCTGTTTTCACTGGCAGATTTCAAGGTGCCGGCTCCACCTACCGCAGCTGCTAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR CCA 90 bp GGTGAGAGAGGGCTGGGCTGCCCATGCATCCCAGTTATCCGTTTCTaGTTTCTCATTCGTGCTGGTGGGCCACGTGGAGCTGAAGTCGGC +
Preference number: 1 (lower is better)
Translates to: GERGLGCPCIPVIRF*FLIRAGGPRGAEVG
Trigger: GCCGACTTCAGCTCCACGTGGCCCACCAGCACGAATGAGAAACCAGAAACGGATAACTGGGATGCATGGGCAGCCCAGCCCTCTCTCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379960.9
ENST00000419241.1
3UTR CCA 90 bp TCTCCTACCATCCCCATACATGGGATCCTAAGGGGAGAGTCTAGCTaGGAGGTCGCAGCCTCTCCGAAGCAGGTTCCTCCCAGACACCCG +
Preference number: 1 (lower is better)
Translates to: SPTIPIHGILRGESS*EVAASPKQVPPRHP
Trigger: CGGGTGTCTGGGAGGAACCTGCTTCGGAGAGGCTGCGACCTCCCAGCTAGACTCTCCCCTTAGGATCCCATGTATGGGGATGGTAGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR TCA 90 bp ATACAATTTCCAGACAGCATGTGTGGCCGTGGGCTGGGACCCTGCTaGGCACACCCTGAGCCCGCTGCCTACGGCTCATCAAACAACTGC +
Preference number: 1 (lower is better)
Translates to: IQFPDSMCGRGLGPC*AHPEPAAYGSSNNC
Trigger: GCAGTTGTTTGATGAGCCGTAGGCAGCGGGCTCAGGGTGTGCTCAGCAGGGTCCCAGCCCACGGCCACACATGCTGTCTGGAAATTGTAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381285.8
3UTR TCA 90 bp AGTGCAACTGAACGAGGAGGAGAGGTCCTCGCTCTCTGCACCATGTaGAAGGAGAAGGACCTCTACACGACCACCAGCACAGCCTCCCGA +
Preference number: 1 (lower is better)
Translates to: SATERGGEVLALCTM*KEKDLYTTTSTASR
Trigger: TCGGGAGGCTGTGCTGGTGGTCGTGTAGAGGTCCTTCTCCTTTCACATGGTGCAGAGAGCGAGGACCTCTCCTCCTCGTTCAGTTGCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
3UTR TCA 90 bp ATCCCTCAAGCCCGGGAAGGGGCTAGACTCCCAGCTGCACCCTGTTaGGGGCTATGGGATTTCAGCGACCCTAGAAGCCATAATGAGACC +
Preference number: 1 (lower is better)
Translates to: IPQAREGARLPAAPC*GLWDFSDPRSHNET
Trigger: GGTCTCATTATGGCTTCTAGGGTCGCTGAAATCCCATAGCCCTCAACAGGGTGCAGCTGGGAGTCTAGCCCCTTCCCGGGCTTGAGGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000381318.8
3UTR GCA 90 bp TGGCTTTACACTTGTCCTAGCCAGTTCCTGGAGAGACAGCCGGCCTaGTTAGCCTTGGAAGGCAGACCTGCAAGTGTCCTTCCCTGCTGG +
Preference number: 1 (lower is better)
Translates to: WLYTCPSQFLERQPA*LALEGRPASVLPCW
Trigger: CCAGCAGGGAAGGACACTTGCAGGTCTGCCTTCCAAGGCTAAGCAGGCCGGCTGTCTCTCCAGGAACTGGCTAGGACAAGTGTAAAGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR GCA 90 bp CTCTCCTCCTCTCTCTGCCGTTCTAGCTCCCGCTGCTTTTCCAGTTaGTTCTCCAGTTCCAGTTGTCTTTTGCGCTCTTGCTCCTGGCGC +
Preference number: 1 (lower is better)
Translates to: LSSSLCRSSSRCFSS*FSSSSCLLRSCSWR
Trigger: GCGCCAGGAGCAAGAGCGCAAAAGACAACTGGAACTGGAGAAGCAACTGGAAAAGCAGCGGGAGCTAGAACGGCAGAGAGAGGAGGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379960.9
3UTR GCA 90 bp CCTGCCCCAGAGGGACCAGGATGTGGACTCTGCCTTCTAGAGAACTaGTCTGTGAAGAAGGCTCAGCCCAAGAGGTCCCAGGATAGTTCA +
Preference number: 1 (lower is better)
Translates to: PAPEGPGCGLCLLEN*SVKKAQPKRSQDSS
Trigger: TGAACTATCCTGGGACCTCTTGGGCTGAGCCTTCTTCACAGAGCAGTTCTCTAGAAGGCAGAGTCCACATCCTGGTCCCTCTGGGGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR GCA 90 bp AACTGCAGGTCCAAGCGGACCACAATCTCTCCCGTGGGGACTTCGTaGAGCAGAAGACACTTCGTAACTGGACCTTTGGAGCCCTGGTCT +
Preference number: 1 (lower is better)
Translates to: NCRSKRTTISPVGTS*SRRHFVTGPLEPWS
Trigger: AGACCAGGGCTCCAAAGGTCCAGTTACGAAGTGTCTTCTGCTGCACGAAGTCCCCACGGGAGAGATTGTGGTCCGCTTGGACCTGCAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381285.8
3UTR CCA 90 bp GACCTCTGCCTTAACTGGCCGGCACTTGGAACGGTGAGAGAGGGCTaGGCTGCCCATGCATCCCAGTTATCCGTTTCTGGTTTCTCATTC +
Preference number: 1 (lower is better)
Translates to: DLCLNWPALGTVREG*AAHASQLSVSGFSF
Trigger: GAATGAGAAACCAGAAACGGATAACTGGGATGCATGGGCAGCCCAGCCCTCTCTCACCGTTCCAAGTGCCGGCCAGTTAAGGCAGAGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379960.9
ENST00000419241.1
3UTR CCA 90 bp TTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGGCCGTGGGCTaGGACCCTGCTGAGCACACCCTGAGCCCGCTGCCTACGGCTCAT +
Preference number: 1 (lower is better)
Translates to: LEKEYNFQTACVAVG*DPAEHTLSPLPTAH
Trigger: ATGAGCCGTAGGCAGCGGGCTCAGGGTGTGCTCAGCAGGGTCCCAGCCCACGGCCACACATGCTGTCTGGAAATTGTATTCCTTTTCTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381285.8
3UTR TCA 90 bp GTGGACCAGGGTGCCTGGACAGCTGGCTTAGCTGGTTCTTGGTGTTaGTGGAAAAGCCGACCCAGCTTGTCTTGTGCTTCCTGTTTGCCT +
Preference number: 1 (lower is better)
Translates to: VDQGAWTAGLAGSWC*WKSRPSLSCASCLP
Trigger: AGGCAAACAGGAAGCACAAGACAAGCTGGGTCGGCTTTTCCATCAACACCAAGAACCAGCTAAGCCAGCTGTCCAGGCACCCTGGTCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379960.9
3UTR TCA 90 bp ACATCTTCAGGCTCTCATGGTCACAGCAAACCTGGTTCCAGGAGATaGTGCTGTCCATCCACCTGCCAGGGTGATGCCAGCAGCCAGACA +
Preference number: 1 (lower is better)
Translates to: TSSGSHGHSKPGSRR*CCPSTCQGDASSQT
Trigger: TGTCTGGCTGCTGGCATCACCCTGGCAGGTGGATGGACAGCATCATCTCCTGGAACCAGGTTTGCTGTGACCATGAGAGCCTGAAGATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR TCA 90 bp TGGCCAAGTACAGAAAGTCTGTGCCCCAGAAGCAGCCTGGACTTCTaGTCCTTTTCTGGGAATGCAGACGGGAGGAAGGCATCTTCCCCC +
Preference number: 1 (lower is better)
Translates to: WPSTESLCPRSSLDF*SFSGNADGRKASSP
Trigger: GGGGGAAGATGCCTTCCTCCCGTCTGCATTCCCAGAAAAGGATCAGAAGTCCAGGCTGCTTCTGGGGCACAGACTTTCTGTACTTGGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR GCA 90 bp GTGGAGCAACGTATTTCCTGTTTCCCTCTCCAAGGCACAGAGCCATaGATCCCCCTAGGTGTGGGTAGGTACACACGCATGCGCACACAT +
Preference number: 1 (lower is better)
Translates to: VEQRISCFPLQGTEP*IPLGVGRYTRMRTH
Trigger: ATGTGTGCGCATGCGTGTGTACCTACCCACACCTAGGGGGATGCATGGCTCTGTGCCTTGGAGAGGGAAACAGGAAATACGTTGCTCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR TCA 90 bp GCTCAGCCCAAGAGGTCCCAGGATAGTTCAGTTCTCAGGGAAGACTaGGGGTTACAGCATAACCCTATGACCAGCACAGCCCCTTCTTGG +
Preference number: 1 (lower is better)
Translates to: AQPKRSQDSSVLRED*GLQHNPMTSTAPSW
Trigger: CCAAGAAGGGGCTGTGCTGGTCATAGGGTTATGCTGTAACCCTCAGTCTTCCCTGAGAACTGAACTATCCTGGGACCTCTTGGGCTGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR TCA 90 bp CTCAGTCTTTCTGCTGCTTTACGATATCACCTCATGAGTGCAGCCTaGCGGACAAGGAAAGCCCACCTTCCTCTAGAAGGGGCCCAGGCA +
Preference number: 1 (lower is better)
Translates to: LSLSAALRYHLMSAA*RTRKAHLPLEGAQA
Trigger: TGCCTGGGCCCCTTCTAGAGGAAGGTGGGCTTTCCTTGTCCGTCAGGCTGCACTCATGAGGTGATATCGTAAAGCAGCAGAAAGACTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR GCA 90 bp CCTCTAAAGCCTGTAAGGTCACTGGGCAGAAGAGCTAGAGGGAGCTaGCCCGTGAATGGCAGCTGTGGTTTCTTTGCACCCTCAGTCTTT +
Preference number: 1 (lower is better)
Translates to: PLKPVRSLGRRARGS*PVNGSCGFFAPSVF
Trigger: AAAGACTGAGGGTGCAAAGAAACCACAGCTGCCATTCACGGGGCAGCTCCCTCTAGCTCTTCTGCCCAGTGACCTTACAGGCTTTAGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR CCA 90 bp GGTAAGTGGACCTTTTTCTGCAGTGGACCAGGGTGCCTGGACAGCTaGCTTAGCTGGTTCTTGGTGTTGATGGAAAAGCCGACCCAGCTT +
Preference number: 1 (lower is better)
Translates to: GKWTFFCSGPGCLDS*LSWFLVLMEKPTQL
Trigger: AAGCTGGGTCGGCTTTTCCATCAACACCAAGAACCAGCTAAGCCAGCTGTCCAGGCACCCTGGTCCACTGCAGAAAAAGGTCCACTTACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379960.9
3UTR CCA 90 bp TCTTGGGCTAAAGGAGATCAGAGTGTGCAGGAGAAGCTAGCAGTGTaGCTCAGAGCAGAGGAACGCTTGCAGGGGTGTCTAAAAGGCTGG +
Preference number: 1 (lower is better)
Translates to: SWAKGDQSVQEKLAV*LRAEERLQGCLKGW
Trigger: CCAGCCTTTTAGACACCCCTGCAAGCGTTCCTCTGCTCTGAGCCACACTGCTAGCTTCTCCTGCACACTCTGATCTCCTTTAGCCCAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR CCA 90 bp ATATCCAAGGGCTCGAGGGAAACATTCACTCTAGAAGGCGGGCCCTaGGCTACTGCACATGAAGTACAAGCCACTGCGACAAGGAGAGCA +
Preference number: 1 (lower is better)
Translates to: ISKGSRETFTLEGGP*ATAHEVQATATRRA
Trigger: TGCTCTCCTTGTCGCAGTGGCTTGTACTTCATGTGCAGTAGCCCAGGGCCCGCCTTCTAGAGTGAATGTTTCCCTCGAGCCCTTGGATAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR CCA 90 bp TGTCCGCAAACCACGCGACTAGTCCTGACCAGGATGACAGGACTGTaGAGCAACGTATTTCCTGTTTCCCTCTCCAAGGCACAGAGCCAT +
Preference number: 1 (lower is better)
Translates to: CPQTTRLVLTRMTGL*SNVFPVSLSKAQSH
Trigger: ATGGCTCTGTGCCTTGGAGAGGGAAACAGGAAATACGTTGCTCCACAGTCCTGTCATCCTGGTCAGGACTAGTCGCGTGGTTTGCGGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR CCA 90 bp GAGTTTCACAGAATCCTCCTTAGGTGGCCTAAGGGGCACTTCTGGTaGCCAAGTACAGAAAGTCTGTGCCCCAGAAGCAGCCTGGACTTC +
Preference number: 1 (lower is better)
Translates to: EFHRILLRWPKGHFW*PSTESLCPRSSLDF
Trigger: GAAGTCCAGGCTGCTTCTGGGGCACAGACTTTCTGTACTTGGCCACCAGAAGTGCCCCTTAGGCCACCTAAGGAGGATTCTGTGAAACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR CCA 90 bp ACTTCGTGCAGCAGAAGACACTTCGTAACTGGACCTTTGGAGCCCTaGTCTTTCTTGATGTCCGCCACACGGATCTCCGTCCGACCCAAA +
Preference number: 1 (lower is better)
Translates to: TSCSRRHFVTGPLEP*SFLMSATRISVRPK
Trigger: TTTGGGTCGGACGGAGATCCGTGTGGCGGACATCAAGAAAGACCAGGGCTCCAAAGGTCCAGTTACGAAGTGTCTTCTGCTGCACGAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381285.8
3UTR CCA 90 bp AATCTCTCCCGTGGGGACTTCGTGCAGCAGAAGACACTTCGTAACTaGACCTTTGGAGCCCTGGTCTTTCTTGATGTCCGCCACACGGAT +
Preference number: 1 (lower is better)
Translates to: NLSRGDFVQQKTLRN*TFGALVFLDVRHTD
Trigger: ATCCGTGTGGCGGACATCAAGAAAGACCAGGGCTCCAAAGGTCCAGTTACGAAGTGTCTTCTGCTGCACGAAGTCCCCACGGGAGAGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381285.8
3UTR TCA 90 bp CACTGGGGAAGGGACACTGAGCACTTCTATGACCCTGCTTCTCTTTaGAGGCAGAAGGTTGGAAAAGGCTTGCTGTCCTCCCAGGAAAGG +
Preference number: 1 (lower is better)
Translates to: HWGRDTEHFYDPASL*RQKVGKGLLSSQER
Trigger: CCTTTCCTGGGAGGACAGCAAGCCTTTTCCAACCTTCTGCCTTCAAAGAGAAGCAGGGTCATAGAAGTGCTCAGTGTCCCTTCCCCAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR GCA 90 bp TTGCACCCTCAGTCTTTCTGCTGCTTTACGATATCACCTCATGAGTaGAGCCTGACGGACAAGGAAAGCCCACCTTCCTCTAGAAGGGGC +
Preference number: 1 (lower is better)
Translates to: LHPQSFCCFTISPHE*SLTDKESPPSSRRG
Trigger: GCCCCTTCTAGAGGAAGGTGGGCTTTCCTTGTCCGTCAGGCTGCACTCATGAGGTGATATCGTAAAGCAGCAGAAAGACTGAGGGTGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR GCA 90 bp TGCACACGCACGCACAAACACGCATGCACACACCACGCACTGAGCTaGTGCGTCCCACCAACAAAAATTCCCTTCCACCTAAAATTCCAG +
Preference number: 1 (lower is better)
Translates to: CTRTHKHACTHHALS*CVPPTKIPFHLKFQ
Trigger: CTGGAATTTTAGGTGGAAGGGAATTTTTGTTGGTGGGACGCAGCAGCTCAGTGCGTGGTGTGTGCATGCGTGTTTGTGCGTGCGTGTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR GCA 90 bp GTGCACGCACAAACACATACATGCACACGCACGCACAAACACGCATaGACACACCACGCACTGAGCTGCTGCGTCCCACCAACAAAAATT +
Preference number: 1 (lower is better)
Translates to: VHAQTHTCTRTHKHA*THHALSCCVPPTKI
Trigger: AATTTTTGTTGGTGGGACGCAGCAGCTCAGTGCGTGGTGTGTGCATGCGTGTTTGTGCGTGCGTGTGCATGTATGTGTTTGTGCGTGCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR GCA 90 bp GTTTCAACTCGATGCCTTCAACCACGTTCACCATCAACCTTCCAATaGCTGTTGCCCTTTGGGAACGGACCAGGTACGCTTTCTCGCGCT +
Preference number: 1 (lower is better)
Translates to: VSTRCLQPRSPSTFQ*LLPFGNGPGTLSRA
Trigger: AGCGCGAGAAAGCGTACCTGGTCCGTTCCCAAAGGGCAACAGGCATTGGAAGGTTGATGGTGAACGTGGTTGAAGGCATCGAGTTGAAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000420666.1
3UTR CCA 90 bp CACCCATGTTTCTCAATCCCTGTGACACAACTCATGAATCACAGCTaGGTCCGAGGGCCAGCCCGACTCCTCCATACGGACAATTGGTTA +
Preference number: 1 (lower is better)
Translates to: HPCFSIPVTQLMNHS*VRGPARLLHTDNWL
Trigger: TAACCAATTGTCCGTATGGAGGAGTCGGGCTGGCCCTCGGACCCAGCTGTGATTCATGAGTTGTGTCACAGGGATTGAGAAACATGGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR CCA 90 bp TTAGTCCAGGCCTGGATCCGAATGAGCCACATCTTCAGGCTCTCATaGTCACAGCAAACCTGGTTCCAGGAGATGATGCTGTCCATCCAC +
Preference number: 1 (lower is better)
Translates to: LVQAWIRMSHIFRLS*SQQTWFQEMMLSIH
Trigger: GTGGATGGACAGCATCATCTCCTGGAACCAGGTTTGCTGTGACCATGAGAGCCTGAAGATGTGGCTCATTCGGATCCAGGCCTGGACTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR CCA 90 bp ACTTCTGGTGGCCAAGTACAGAAAGTCTGTGCCCCAGAAGCAGCCTaGACTTCTGATCCTTTTCTGGGAATGCAGACGGGAGGAAGGCAT +
Preference number: 1 (lower is better)
Translates to: TSGGQVQKVCAPEAA*TSDPFLGMQTGGRH
Trigger: ATGCCTTCCTCCCGTCTGCATTCCCAGAAAAGGATCAGAAGTCCAGGCTGCTTCTGGGGCACAGACTTTCTGTACTTGGCCACCAGAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR CCA 90 bp ATTGAGTTTCACAGAATCCTCCTTAGGTGGCCTAAGGGGCACTTCTaGTGGCCAAGTACAGAAAGTCTGTGCCCCAGAAGCAGCCTGGAC +
Preference number: 1 (lower is better)
Translates to: IEFHRILLRWPKGHF*WPSTESLCPRSSLD
Trigger: GTCCAGGCTGCTTCTGGGGCACAGACTTTCTGTACTTGGCCACCAGAAGTGCCCCTTAGGCCACCTAAGGAGGATTCTGTGAAACTCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR CCA 90 bp TTTGTTACTGCAGTATTTCCAGGCTGCCAGGGGAGGCTGGACTCCTaGGGTTGCCCCCTCCTGAAATCATTTCTGAATGCCTTTCTCAGG +
Preference number: 1 (lower is better)
Translates to: FVTAVFPGCQGRLDS*GCPLLKSFLNAFLR
Trigger: CCTGAGAAAGGCATTCAGAAATGATTTCAGGAGGGGGCAACCCCAGGAGTCCAGCCTCCCCTGGCAGCCTGGAAATACTGCAGTAACAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR GCA 90 bp TGCCTCTTATGGTGGCTCAGACTATACTGTCTGAGGGCTTCATCATaGTACCGGTTTCTGGGGCTACTGGTTATGCTTCTGCCTGGTGTG +
Preference number: 1 (lower is better)
Translates to: CLLWWLRLYCLRASS*YRFLGLLVMLLPGV
Trigger: CACACCAGGCAGAAGCATAACCAGTAGCCCCAGAAACCGGTAGCATGATGAAGCCCTCAGACAGTATAGTCTGAGCCACCATAAGAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR GCA 90 bp CACCCAACGCTGCAAAGCCACTACACCCTTTCTTTGGTTCCTGTCTaGCTGAGGCCCCCATTCTGTTTAGATACAGGAACGGCAGGAAAT +
Preference number: 1 (lower is better)
Translates to: HPTLQSHYTLSLVPV*LRPPFCLDTGTAGN
Trigger: ATTTCCTGCCGTTCCTGTATCTAAACAGAATGGGGGCCTCAGGCAGACAGGAACCAAAGAAAGGGTGTAGTGGCTTTGCAGCGTTGGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR GCA 90 bp GTCAGCCCCAGATCCCTAACAAATCCACTAGAACCCAAGGAAGCCTaGGTGGCACATGGATCTGATGAAAAACAGGCTCCCTATCCTCTC +
Preference number: 1 (lower is better)
Translates to: VSPRSLTNPLEPKEA*VAHGSDEKQAPYPL
Trigger: GAGAGGATAGGGAGCCTGTTTTTCATCAGATCCATGTGCCACGCAGGCTTCCTTGGGTTCTAGTGGATTTGTTAGGGATCTGGGGCTGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR GCA 90 bp AGTACGGGTTGCTCTTTCCATGTGACCGACAGGGTTTCAACTCGATaGCTTCAACCACGTTCACCATCAACCTTCCAATGCCTGTTGCCC +
Preference number: 1 (lower is better)
Translates to: STGCSFHVTDRVSTR*LQPRSPSTFQCLLP
Trigger: GGGCAACAGGCATTGGAAGGTTGATGGTGAACGTGGTTGAAGGCATCGAGTTGAAACCCTGTCGGTCACATGGAAAGAGCAACCCGTACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000420666.1
3UTR TCA 90 bp AGAAGTACCTGCCACTCATACTTAATACAAGCCTGTTTCTGTCCCTaGGATCCGCCCCAGAACCTAGGCTGGCCTAGCAATCCTCATCTG +
Preference number: 1 (lower is better)
Translates to: RSTCHSYLIQACFCP*DPPQNLGWPSNPHL
Trigger: CAGATGAGGATTGCTAGGCCAGCCTAGGTTCTGGGGCGGATCTCAGGGACAGAAACAGGCTTGTATTAAGTATGAGTGGCAGGTACTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR TCA 90 bp TACAAAGAAGCAGGATCCAGAGGAAGCTGTGGGGCGCCATTAAGTTaGCCAGCCAATTACTTCCTCCGTGTCAGGTCTAACCAGAAGAGG +
Preference number: 1 (lower is better)
Translates to: YKEAGSRGSCGAPLS*PANYFLRVRSNQKR
Trigger: CCTCTTCTGGTTAGACCTGACACGGAGGAAGTAATTGGCTGGTCAACTTAATGGCGCCCCACAGCTTCCTCTGGATCCTGCTTCTTTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR TCA 90 bp AGGGTCATGGAGGGCACAGACTCCGGCTTGCGGGGCTACAGCAGATaGGATCTGAGGTTGATTTCACAGTTCAAAGATACTTGGGCTATT +
Preference number: 1 (lower is better)
Translates to: RVMEGTDSGLRGYSR*DLRLISQFKDTWAI
Trigger: AATAGCCCAAGTATCTTTGAACTGTGAAATCAACCTCAGATCTCATCTGCTGTAGCCCCGCAAGCCGGAGTCTGTGCCCTCCATGACCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR TCA 90 bp GCACTGTGGCCCGCTTGTCACTGGAAGCACAAGGAGCTCACGTTCTaGTGGATTACATTCTTTTCCAAACAGGCAAAGGCTATCTGGGAG +
Preference number: 1 (lower is better)
Translates to: ALWPACHWKHKELTF*WITFFSKQAKAIWE
Trigger: CTCCCAGATAGCCTTTGCCTGTTTGGAAAAGAATGTAATCCATCAGAACGTGAGCTCCTTGTGCTTCCAGTGACAAGCGGGCCACAGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR GCA 90 bp ATTTCTTTCCTCCTCTCCTCCTCTCTCTGCCGTTCTAGCTCCCGCTaGTTTTCCAGTTGCTTCTCCAGTTCCAGTTGTCTTTTGCGCTCT +
Preference number: 1 (lower is better)
Translates to: ISFLLSSSLCRSSSR*FSSCFSSSSCLLRS
Trigger: AGAGCGCAAAAGACAACTGGAACTGGAGAAGCAACTGGAAAAGCAGCGGGAGCTAGAACGGCAGAGAGAGGAGGAGAGGAGGAAAGAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379960.9
3UTR TCA 90 bp ATAGTTCAGTTCTCAGGGAAGACTGAGGGTTACAGCATAACCCTATaGCCAGCACAGCCCCTTCTTGGGCTAAAGGAGATCAGAGTGTGC +
Preference number: 1 (lower is better)
Translates to: IVQFSGKTEGYSITL*PAQPLLGLKEIRVC
Trigger: GCACACTCTGATCTCCTTTAGCCCAAGAAGGGGCTGTGCTGGTCATAGGGTTATGCTGTAACCCTCAGTCTTCCCTGAGAACTGAACTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR TCA 90 bp CTCCCCCAGGGCCAGGGTAAAGAGGGTTCCTTTGAATGGAGGAACTaGTTGAGGCTGCATGGAACTAAAGAAGTTATTGGGAGGTGGATA +
Preference number: 1 (lower is better)
Translates to: LPQGQGKEGSFEWRN*LRLHGTKEVIGRWI
Trigger: TATCCACCTCCCAATAACTTCTTTAGTTCCATGCAGCCTCAATCAGTTCCTCCATTCAAAGGAACCCTCTTTACCCTGGCCCTGGGGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR GCA 90 bp ATTCCGTTCCCACTCAAGTTGTCGTTGCCTTTCAAGTTCCCGTTTTaGAGCCTCTCGCCTCTCAATTTCTTTCCTCCTCTCCTCCTCTCT +
Preference number: 1 (lower is better)
Translates to: IPFPLKLSLPFKFPF*SLSPLNFFPPLLLS
Trigger: AGAGAGGAGGAGAGGAGGAAAGAAATTGAGAGGCGAGAGGCTGCAAAACGGGAACTTGAAAGGCAACGACAACTTGAGTGGGAACGGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379960.9
3UTR CCA 90 bp CCATTTCTCCCTTCATCTTCAGCCCCATCAGATTCTAGAACATCCTaGTTCTGTGTGGTCAGTGGCTTTACACTTGTCCTAGCCAGTTCC +
Preference number: 1 (lower is better)
Translates to: PFLPSSSAPSDSRTS*FCVVSGFTLVLASS
Trigger: GGAACTGGCTAGGACAAGTGTAAAGCCACTGACCACACAGAACCAGGATGTTCTAGAATCTGATGGGGCTGAAGATGAAGGGAGAAATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR CCA 90 bp TTTCTCAGGGGTTTAGACATTGAGTTTCACAGAATCCTCCTTAGGTaGCCTAAGGGGCACTTCTGGTGGCCAAGTACAGAAAGTCTGTGC +
Preference number: 1 (lower is better)
Translates to: FLRGLDIEFHRILLR*PKGHFWWPSTESLC
Trigger: GCACAGACTTTCTGTACTTGGCCACCAGAAGTGCCCCTTAGGCCACCTAAGGAGGATTCTGTGAAACTCAATGTCTAAACCCCTGAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR TCA 90 bp CCAAGCAGACCTGCTGCTAATTGCACACTCACCTCGAGCCCAAAATaGCCCTGTTACATCCAAAGCACACCAGGTATTCATGTAAAAGTG +
Preference number: 1 (lower is better)
Translates to: PSRPAANCTLTSSPK*PCYIQSTPGIHVKV
Trigger: CACTTTTACATGAATACCTGGTGTGCTTTGGATGTAACAGGGTCATTTTGGGCTCGAGGTGAGTGTGCAATTAGCAGCAGGTCTGCTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR TCA 90 bp CCCAGGGCCAGGGTAAAGAGGGTTCCTTTGAATGGAGGAACTGATTaGGGCTGCATGGAACTAAAGAAGTTATTGGGAGGTGGATATGAA +
Preference number: 1 (lower is better)
Translates to: PRARVKRVPLNGGTD*GCMELKKLLGGGYE
Trigger: TTCATATCCACCTCCCAATAACTTCTTTAGTTCCATGCAGCCTCAATCAGTTCCTCCATTCAAAGGAACCCTCTTTACCCTGGCCCTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR TCA 90 bp GTGATCAGCTCTAGGCAGCATTTCCCTGCAGGAGAGATGGGATTCTaGAGCAATGACAGGACCGTCATAATTGTTTCTAAACTCACACCA +
Preference number: 1 (lower is better)
Translates to: VISSRQHFPAGEMGF*SNDRTVIIVSKLTP
Trigger: TGGTGTGAGTTTAGAAACAATTATGACGGTCCTGTCATTGCTTCAGAATCCCATCTCTCCTGCAGGGAAATGCTGCCTAGAGCTGATCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000381318.8
3UTR TCA 90 bp AGCACATTCAAGCACAGAACAGGTCACCAGCAACGACTGCTGCTATaGAATATCACAGGCCTCCGAGCCAAAAGAGATTTTTCCAACATG +
Preference number: 1 (lower is better)
Translates to: STFKHRTGHQQRLLL*NITGLRAKRDFSNM
Trigger: CATGTTGGAAAAATCTCTTTTGGCTCGGAGGCCTGTGATATTTCATAGCAGCAGTCGTTGCTGGTGACCTGTTCTGTGCTTGAATGTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000381318.8
3UTR GCA 90 bp TTTAGTAGTTCTTGCCTTCGATTCCGTTCCCACTCAAGTTGTCGTTaGCTTTCAAGTTCCCGTTTTGCAGCCTCTCGCCTCTCAATTTCT +
Preference number: 1 (lower is better)
Translates to: FSSSCLRFRSHSSCR*LSSSRFAASRLSIS
Trigger: AGAAATTGAGAGGCGAGAGGCTGCAAAACGGGAACTTGAAAGGCAACGACAACTTGAGTGGGAACGGAATCGAAGGCAAGAACTACTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379960.9
3UTR GCA 90 bp GATTCAGCACATTCAAGCACAGAACAGGTCACCAGCAACGACTGCTaGTATGAAATATCACAGGCCTCCGAGCCAAAAGAGATTTTTCCA +
Preference number: 1 (lower is better)
Translates to: DSAHSSTEQVTSNDC*YEISQASEPKEIFP
Trigger: TGGAAAAATCTCTTTTGGCTCGGAGGCCTGTGATATTTCATAGCAGCAGTCGTTGCTGGTGACCTGTTCTGTGCTTGAATGTGCTGAATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000381318.8
3UTR GCA 90 bp CAGGATTCAGCACATTCAAGCACAGAACAGGTCACCAGCAACGACTaGTGCTATGAAATATCACAGGCCTCCGAGCCAAAAGAGATTTTT +
Preference number: 1 (lower is better)
Translates to: QDSAHSSTEQVTSND*CYEISQASEPKEIF
Trigger: AAAAATCTCTTTTGGCTCGGAGGCCTGTGATATTTCATAGCAGCAGTCGTTGCTGGTGACCTGTTCTGTGCTTGAATGTGCTGAATCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000381318.8
3UTR CCA 90 bp AGAGATCACAACCCAGAGATGGACTGTCTAGTGTGTCTTGGTGTCTaGGTTTTAATGCTCCCAAGACAGACAGCTGTTAGATGTCTTCTG +
Preference number: 1 (lower is better)
Translates to: RDHNPEMDCLVCLGV*VLMLPRQTAVRCLL
Trigger: CAGAAGACATCTAACAGCTGTCTGTCTTGGGAGCATTAAAACCCAGACACCAAGACACACTAGACAGTCCATCTCTGGGTTGTGATCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR TCA 90 bp ATCTCTGCTTTCATTTTGATTACTTTACATCCCAGGGTTCAAATGTaGACATGCTCCTTCTTCTCCCCAGCACTATCTTCCTGCAGGGGG +
Preference number: 1 (lower is better)
Translates to: ISAFILITLHPRVQM*TCSFFSPALSSCRG
Trigger: CCCCCTGCAGGAAGATAGTGCTGGGGAGAAGAAGGAGCATGTTCACATTTGAACCCTGGGATGTAAAGTAATCAAAATGAAAGCAGAGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456489.1
3UTR TCA 90 bp AGGAGCTTTGAGGGGCCTGTCTTTGCCATCCCATATCCCTGTGACTaGATACCAAATGGTGGTTTCTTAGAAAAGGAATACAATTTCCAG +
Preference number: 1 (lower is better)
Translates to: RSFEGPVFAIPYPCD*IPNGGFLEKEYNFQ
Trigger: CTGGAAATTGTATTCCTTTTCTAAGAAACCACCATTTGGTATTCAGTCACAGGGATATGGGATGGCAAAGACAGGCCCCTCAAAGCTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
3UTR CCA 90 bp ATCTCCTGTAGTTTTGATCTAGTTTCTTTCTCCACTTCATCCAGTTaGTCTCGTAGGTGCTGCCGAGCTAGTTCTTTTGCTTCTAAGGCT +
Preference number: 1 (lower is better)
Translates to: ISCSFDLVSFSTSSS*SRRCCRASSFASKA
Trigger: AGCCTTAGAAGCAAAAGAACTAGCTCGGCAGCACCTACGAGACCAACTGGATGAAGTGGAGAAAGAAACTAGATCAAAACTACAGGAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379960.9
3UTR TCA 90 bp CTGGTTGACAGCATTAAGATGCACGCAGCCTGTTCAAAGAAATGTTaGAAACCTAACACATTCTTCAGATGTCTTTTCAGACCACAGGCC +
Preference number: 1 (lower is better)
Translates to: LVDSIKMHAACSKKC*KPNTFFRCLFRPQA
Trigger: GGCCTGTGGTCTGAAAAGACATCTGAAGAATGTGTTAGGTTTTCAACATTTCTTTGAACAGGCTGCGTGCATCTTAATGCTGTCAACCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR GCA 90 bp GATCTAGTTTCTTTCTCCACTTCATCCAGTTGGTCTCGTAGGTGCTaGCGAGCTAGTTCTTTTGCTTCTAAGGCTCTTTTAAGTGTAACA +
Preference number: 1 (lower is better)
Translates to: DLVSFSTSSSWSRRC*RASSFASKALLSVT
Trigger: TGTTACACTTAAAAGAGCCTTAGAAGCAAAAGAACTAGCTCGGCAGCACCTACGAGACCAACTGGATGAAGTGGAGAAAGAAACTAGATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379960.9
3UTR GCA 90 bp TTTGATCTAGTTTCTTTCTCCACTTCATCCAGTTGGTCTCGTAGGTaGTGCCGAGCTAGTTCTTTTGCTTCTAAGGCTCTTTTAAGTGTA +
Preference number: 1 (lower is better)
Translates to: FDLVSFSTSSSWSRR*CRASSFASKALLSV
Trigger: TACACTTAAAAGAGCCTTAGAAGCAAAAGAACTAGCTCGGCAGCACCTACGAGACCAACTGGATGAAGTGGAGAAAGAAACTAGATCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379960.9
3UTR CCA 90 bp AATTACACCAGTAAATACAAGGACACTAATCCAGAACTTGCTACATaGCAGGAGCATCTCAAGGATGCTCAACAGAGTCACTTGAGGAAA +
Preference number: 1 (lower is better)
Translates to: NYTSKYKDTNPELAT*QEHLKDAQQSHLRK
Trigger: TTTCCTCAAGTGACTCTGTTGAGCATCCTTGAGATGCTCCTGCCATGTAGCAAGTTCTGGATTAGTGTCCTTGTATTTACTGGTGTAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR TCA 90 bp ACTACACATTCAGTTCCCAGCAAAGGAGGTACTCTGCCACAACGCTaGTGCTATCATTTAGAAAGCACTTTGATAACCCTAATTAAAGTC +
Preference number: 1 (lower is better)
Translates to: TTHSVPSKGGTLPQR*CYHLESTLITLIKV
Trigger: GACTTTAATTAGGGTTATCAAAGTGCTTTCTAAATGATAGCATCAGCGTTGTGGCAGAGTACCTCCTTTGCTGGGAACTGAATGTGTAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR GCA 90 bp CGTTCTTGTTCTTTCTGTTTCAGTCGTTCAGCCTCCATGGACTTTTaGTTCTGGAGTTGTTGCTTATTGTGTATTTCTCTTAGTTCCTTC +
Preference number: 1 (lower is better)
Translates to: RSCSFCFSRSASMDF*FWSCCLLCISLSSF
Trigger: GAAGGAACTAAGAGAAATACACAATAAGCAACAACTCCAGAAGCAAAAGTCCATGGAGGCTGAACGACTGAAACAGAAAGAACAAGAACG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379960.9
3UTR CCA 90 bp CATGCTACATTAATTCCAATAATAGGACACTATGAGTGGGTGACCTaGGACCTAAAACGATTGTTTGTCATTGTGCATACCATACGCTAC +
Preference number: 1 (lower is better)
Translates to: HATLIPIIGHYEWVT*DLKRLFVIVHTIRY
Trigger: GTAGCGTATGGTATGCACAATGACAAACAATCGTTTTAGGTCCCAGGTCACCCACTCATAGTGTCCTATTATTGGAATTAATGTAGCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR TCA 90 bp CCTGAGCTCGTCTTTGGGCTTCTTCTTTTTGTTTTTCTAATTCTATaGTCTTTCGTTCTTGTTCTTTCTGTTTCAGTCGTTCAGCCTCCA +
Preference number: 1 (lower is better)
Translates to: PELVFGLLLFVFLIL*SFVLVLSVSVVQPP
Trigger: TGGAGGCTGAACGACTGAAACAGAAAGAACAAGAACGAAAGATCATAGAATTAGAAAAACAAAAAGAAGAAGCCCAAAGACGAGCTCAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000379960.9
3UTR CCA 90 bp TTGCTTTCTCATGCTACATTAATTCCAATAATAGGACACTATGAGTaGGTGACCTGGGACCTAAAACGATTGTTTGTCATTGTGCATACC +
Preference number: 1 (lower is better)
Translates to: LLSHATLIPIIGHYE*VTWDLKRLFVIVHT
Trigger: GGTATGCACAATGACAAACAATCGTTTTAGGTCCCAGGTCACCCACTCATAGTGTCCTATTATTGGAATTAATGTAGCATGAGAAAGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR CCA 90 bp GCTATGCAACAGTTGAAGACAGTGAGGATGCATCAGGAAATTTCATaGAAAACGCAAACGCTAATTAGGGATAAACTGAATCAATCCAGA +
Preference number: 1 (lower is better)
Translates to: AMQQLKTVRMHQEIS*KTQTLIRDKLNQSR
Trigger: TCTGGATTGATTCAGTTTATCCCTAATTAGCGTTTGCGTTTTCCATGAAATTTCCTGATGCATCCTCACTGTCTTCAACTGTTGCATAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR TCA 90 bp CATATTGCTTTCTCATGCTACATTAATTCCAATAATAGGACACTATaGGTGGGTGACCTGGGACCTAAAACGATTGTTTGTCATTGTGCA +
Preference number: 1 (lower is better)
Translates to: HIAFSCYINSNNRTL*VGDLGPKTIVCHCA
Trigger: TGCACAATGACAAACAATCGTTTTAGGTCCCAGGTCACCCACTCATAGTGTCCTATTATTGGAATTAATGTAGCATGAGAAAGCAATATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR CCA 90 bp GTAACTGGAATAAAACTTCATGTAACAGAGACTAAAAAGAGACTGTaGATATCGTTGATCGTAACGACCTCAGTGGTGTTGTCTACTGAT +
Preference number: 1 (lower is better)
Translates to: VTGIKLHVTETKKRL*ISLIVTTSVVLSTD
Trigger: ATCAGTAGACAACACCACTGAGGTCGTTACGATCAACGATATCCACAGTCTCTTTTTAGTCTCTGTTACATGAAGTTTTATTCCAGTTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
3UTR TCA 90 bp CCTAAAACGATTGTTTGTCATTGTGCATACCATACGCTACCTACATaGACAATGATGTCCAACATTAACACGCAAATAAAGTCAATGAAG +
Preference number: 1 (lower is better)
Translates to: PKTIVCHCAYHTLPT*TMMSNINTQIKSMK
Trigger: CTTCATTGACTTTATTTGCGTGTTAATGTTGGACATCATTGTTCATGTAGGTAGCGTATGGTATGCACAATGACAAACAATCGTTTTAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR TCA 90 bp ATTGTTCTTTTTAGGTTCAAGATACACAGGAAGAGCAATTTGTACTaGTGTTGCTACTGGTTTAAAGAAAGGTCTCAGTTACCATCATCT +
Preference number: 1 (lower is better)
Translates to: IVLFRFKIHRKSNLY*CCYWFKERSQLPSS
Trigger: AGATGATGGTAACTGAGACCTTTCTTTAAACCAGTAGCAACATCAGTACAAATTGCTCTTCCTGTGTATCTTGAACCTAAAAAGAACAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR-3UTR TCA 90 bp GCCCGTCCAGCTGCCGCCCAGCTTCTAGGAGGGTGGCCTGGACCAGGATGGGGAGGGCTGGGACCCTGCTaGGCACACCCTGAGCCCGCT +
Preference number: 2 (lower is better)
Translates to: ARPAAAQLLGGWPGPGWGGLGPC*AHPEPA
Trigger: AGCGGGCTCAGGGTGTGCTCAGCAGGGTCCCAGCCC...TCCCCATCCTGGTCCAGGCCACCCTCCTAGAAGCTGGGCGGCAGCTGGACGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR-3UTR GCA 90 bp GCCCGTCCAGCTGCCGCCCAGCTTCTAGGAGGGTGGCCTGGACCAGGATGGGGAGGAAGCTGCAGGGAATaGATCCCTTGGCCCCCAGGA +
Preference number: 2 (lower is better)
Translates to: ARPAAAQLLGGWPGPGWGGSCRE*IPWPPG
Trigger: TCCTGGGGGCCAAGGGATGCATTCCCTGCAGCTTCC...TCCCCATCCTGGTCCAGGCCACCCTCCTAGAAGCTGGGCGGCAGCTGGACGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR CAA 90 bp GCAGGGAAGAGCAAGGTCTCACTGGAGACCCCTGGCGCGCTAGGCTaGAACCCTAGGCTCGCCGCGAGCTTCCTTCCCACCCAGCCTTCG +
Preference number: 2 (lower is better)
Translates to: AGKSKVSLETPGALG*NPRLAASFLPTQPS
Trigger: CGAAGGCTGGGTGGGAAGGAAGCTCGCGGCGAGCCTAGGGTTCAAGCCTAGCGCGCCAGGGGTCTCCAGTGAGACCTTGCTCTTCCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR-3UTR TCA 90 bp AAGGGGCTAGACTCCCAGCTGCACCCTGTTGAGGGCTATGGGATTTCAGCGACCGGGCTGGGACCCTGCTaGGCACACCCTGAGCCCGCT +
Preference number: 2 (lower is better)
Translates to: KGLDSQLHPVEGYGISATGLGPC*AHPEPA
Trigger: AGCGGGCTCAGGGTGTGCTCAGCAGGGTCCCAGCCC...GGTCGCTGAAATCCCATAGCCCTCAACAGGGTGCAGCTGGGAGTCTAGCCCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
3UTR-3UTR CCA 90 bp GGGCACTTCTGGTGGCCAAGTACAGAAAGTCTGTGCCCCAGAAGCAGCCTGGACGCAGACCAGATCGTGTaGCCCAGCTGGGCAGGGAGG +
Preference number: 2 (lower is better)
Translates to: GHFWWPSTESLCPRSSLDADQIV*PSWAGR
Trigger: CCTCCCTGCCCAGCTGGGCCACACGATCTGGTCTGC...GTCCAGGCTGCTTCTGGGGCACAGACTTTCTGTACTTGGCCACCAGAAGTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR-3UTR CCA 90 bp ACTGCAGGGGGTCCGGGAAGAGAAGCACAATCCGGGGCTGCATGTGGCCTAGTCAGGAGGAAGTCAGGCTaGCCTAGCACAGGAGACGGG +
Preference number: 2 (lower is better)
Translates to: TAGGPGREAQSGAACGLVRRKSG*PSTGDG
Trigger: CCCGTCTCCTGTGCTAGGCCAGCCTGACTTCCTCCT...GACTAGGCCACATGCAGCCCCGGATTGTGCTTCTCTTCCCGGACCCCCTGCAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000419241.1
3UTR-3UTR CCA 90 bp AGCCTCTCCGAAGCAGGTTCCTCCCAGACACCCGCAGACCAGATCGTGTGGCCCGAGAAGCTAGCAGTGTaGCTCAGAGCAGAGGAACGC +
Preference number: 2 (lower is better)
Translates to: SLSEAGSSQTPADQIVWPEKLAV*LRAEER
Trigger: GCGTTCCTCTGCTCTGAGCCACACTGCTAGCTTCTC...GGGCCACACGATCTGGTCTGCGGGTGTCTGGGAGGAACCTGCTTCGGAGAGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR-3UTR TCA 90 bp GCCCGTCCAGCTGCCGCCCAGCTTCTAGGAGGGTGGCCTGGACCAGGATGGGGATGCTTCTGCCTGGTGTaGGCTAAAGCTCTTTTATCT +
Preference number: 2 (lower is better)
Translates to: ARPAAAQLLGGWPGPGWGCFCLV*AKALLS
Trigger: AGATAAAAGAGCTTTAGCTCACACCAGGCAGAAGCA...TCCCCATCCTGGTCCAGGCCACCCTCCTAGAAGCTGGGCGGCAGCTGGACGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR-3UTR GCA 90 bp AGCCTCTCCGAAGCAGGTTCCTCCCAGACACCCGCAGACCAGATCGTGTGGCCCTCTTTGGTTCCTGTCTaGCTGAGGCCCCCATTCTGT +
Preference number: 2 (lower is better)
Translates to: SLSEAGSSQTPADQIVWPSLVPV*LRPPFC
Trigger: ACAGAATGGGGGCCTCAGGCAGACAGGAACCAAAGA...GGGCCACACGATCTGGTCTGCGGGTGTCTGGGAGGAACCTGCTTCGGAGAGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR-3UTR CCA 90 bp CAGCCAGAGGGCATCGTTCTAAGGAAGGAGAGTCAGGGCCTGTTTGGGGTTGGTTCCAGACAGCATGTGTaGCCGTGGGCTGGGACCCTG +
Preference number: 2 (lower is better)
Translates to: QPEGIVLRKESQGLFGVGSRQHV*PWAGTL
Trigger: CAGGGTCCCAGCCCACGGCCACACATGCTGTCTGGA...ACCAACCCCAAACAGGCCCTGACTCTCCTTCCTTAGAACGATGCCCTCTGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR-3UTR CCA 90 bp CAGCCAGAGGGCATCGTTCTAAGGAAGGAGAGTCAGGGCCTGTTTGGGGTTGGTCCAGGGGGTGAAGGCTaGAGGAGCAAGTGTCCAGCC +
Preference number: 2 (lower is better)
Translates to: QPEGIVLRKESQGLFGVGPGGEG*RSKCPA
Trigger: GGCTGGACACTTGCTCCTCCAGCCTTCACCCCCTGG...ACCAACCCCAAACAGGCCCTGACTCTCCTTCCTTAGAACGATGCCCTCTGGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR-3UTR TCA 90 bp CTGCACCATGTGAAAGGAGAAGGACCTCTACACGACCACCAGCACAGCCTCCCGCAGCTAGATTGTGCTTaGGGCTCCCCCTGCCCCATT +
Preference number: 2 (lower is better)
Translates to: LHHVKGEGPLHDHQHSLPQLDCA*GSPCPI
Trigger: AATGGGGCAGGGGGAGCCTCAAGCACAATCTAGCTG...CGGGAGGCTGTGCTGGTGGTCGTGTAGAGGTCCTTCTCCTTTCACATGGTGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
3UTR-3UTR TCA 90 bp ACCGACAGGGTTTCAACTCGATGCCTTCAACCACGTTCACCATCAACCTTCCAAGGGCTGGGACCCTGCTaGGCACACCCTGAGCCCGCT +
Preference number: 2 (lower is better)
Translates to: TDRVSTRCLQPRSPSTFQGLGPC*AHPEPA
Trigger: AGCGGGCTCAGGGTGTGCTCAGCAGGGTCCCAGCCC...TTGGAAGGTTGATGGTGAACGTGGTTGAAGGCATCGAGTTGAAACCCTGTCGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381285.8
3UTR-3UTR TCA 90 bp AGCCTCTCCGAAGCAGGTTCCTCCCAGACACCCGCAGACCAGATCGTGTGGCCCTACGATATCACCTCATaGGTGCAGCCTGACGGACAA +
Preference number: 2 (lower is better)
Translates to: SLSEAGSSQTPADQIVWPYDITS*VQPDGQ
Trigger: TTGTCCGTCAGGCTGCACTCATGAGGTGATATCGTA...GGGCCACACGATCTGGTCTGCGGGTGTCTGGGAGGAACCTGCTTCGGAGAGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR-3UTR GCA 90 bp AGCCTCTCCGAAGCAGGTTCCTCCCAGACACCCGCAGACCAGATCGTGTGGCCCCCAGGATGTGGACTCTaGCTTCTAGAGAACTGCTCT +
Preference number: 2 (lower is better)
Translates to: SLSEAGSSQTPADQIVWPPGCGL*LLENCS
Trigger: AGAGCAGTTCTCTAGAAGGCAGAGTCCACATCCTGG...GGGCCACACGATCTGGTCTGCGGGTGTCTGGGAGGAACCTGCTTCGGAGAGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR-3UTR GCA 90 bp AAAGCTGATGCAGAAAGGGTGGGAAGCCTGAGGACCTCCGTGCAGCCCCAGCCTTTAGGCTTGCTTGAATaGCACCAAGGCAGGCCCGTC +
Preference number: 2 (lower is better)
Translates to: KADAERVGSLRTSVQPQPLGLLE*HQGRPV
Trigger: GACGGGCCTGCCTTGGTGGCATTCAAGCAAGCCTAA...AGGCTGGGGCTGCACGGAGGTCCTCAGGCTTCCCACCCTTTCTGCATCAGCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR-3UTR CCA 90 bp CAGCCAGAGGGCATCGTTCTAAGGAAGGAGAGTCAGGGCCTGTTTGGGGTTGGTGAATGGGCTGACCTGTaGGTCCCCCAGGAGGAAGCT +
Preference number: 2 (lower is better)
Translates to: QPEGIVLRKESQGLFGVGEWADL*VPQEEA
Trigger: AGCTTCCTCCTGGGGGACCCACAGGTCAGCCCATTC...ACCAACCCCAAACAGGCCCTGACTCTCCTTCCTTAGAACGATGCCCTCTGGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR-3UTR CCA 90 bp GCCCGTCCAGCTGCCGCCCAGCTTCTAGGAGGGTGGCCTGGACCAGGATGGGGACTGTCTAGTGTGTCTTaGTGTCTGGGTTTTAATGCT +
Preference number: 2 (lower is better)
Translates to: ARPAAAQLLGGWPGPGWGLSSVS*CLGFNA
Trigger: AGCATTAAAACCCAGACACCAAGACACACTAGACAG...TCCCCATCCTGGTCCAGGCCACCCTCCTAGAAGCTGGGCGGCAGCTGGACGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR-3UTR CCA 90 bp GGGCACTTCTGGTGGCCAAGTACAGAAAGTCTGTGCCCCAGAAGCAGCCTGGACGAGAAAAGCTCCCAGTaGATGCCCAAGGCCCAGAGG +
Preference number: 2 (lower is better)
Translates to: GHFWWPSTESLCPRSSLDEKSSQ*MPKAQR
Trigger: CCTCTGGGCCTTGGGCATCCACTGGGAGCTTTTCTC...GTCCAGGCTGCTTCTGGGGCACAGACTTTCTGTACTTGGCCACCAGAAGTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR CAA 90 bp AGTGTGCAGGAGAAGCTAGCAGTGTGGCTCAGAGCAGAGGAACGCTaGCAGGGGTGTCTAAAAGGCTGGGATCAGGATGCCGGGATGCAG +
Preference number: 2 (lower is better)
Translates to: SVQEKLAVWLRAEER*QGCLKGWDQDAGMQ
Trigger: CTGCATCCCGGCATCCTGATCCCAGCCTTTTAGACACCCCTGCAAGCGTTCCTCTGCTCTGAGCCACACTGCTAGCTTCTCCTGCACACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR CAA 90 bp CCCGTGGGGACTTCGTGCAGCAGAAGACACTTCGTAACTGGACCTTaGGAGCCCTGGTCTTTCTTGATGTCCGCCACACGGATCTCCGTC +
Preference number: 2 (lower is better)
Translates to: PVGTSCSRRHFVTGP*EPWSFLMSATRISV
Trigger: GACGGAGATCCGTGTGGCGGACATCAAGAAAGACCAGGGCTCCAAAGGTCCAGTTACGAAGTGTCTTCTGCTGCACGAAGTCCCCACGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381285.8
3UTR-3UTR TCA 90 bp GCCCGTCCAGCTGCCGCCCAGCTTCTAGGAGGGTGGCCTGGACCAGGATGGGGACACAGCTTTGTTTCATaGAACAGGAAATTGTTTCGG +
Preference number: 2 (lower is better)
Translates to: ARPAAAQLLGGWPGPGWGHSFVS*NRKLFR
Trigger: CCGAAACAATTTCCTGTTTCATGAAACAAAGCTGTG...TCCCCATCCTGGTCCAGGCCACCCTCCTAGAAGCTGGGCGGCAGCTGGACGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR-3UTR TCA 90 bp AGCCTCTCCGAAGCAGGTTCCTCCCAGACACCCGCAGACCAGATCGTGTGGCCCGACCCTGCTTCTCTTTaGAGGCAGAAGGTTGGAAAA +
Preference number: 2 (lower is better)
Translates to: SLSEAGSSQTPADQIVWPDPASL*RQKVGK
Trigger: TTTTCCAACCTTCTGCCTTCAAAGAGAAGCAGGGTC...GGGCCACACGATCTGGTCTGCGGGTGTCTGGGAGGAACCTGCTTCGGAGAGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR-3UTR GCA 90 bp CACCATGTGAAAGGAGAAGGACCTCTACACGACCACCAGCACAGCCTCCCGACAAGGACAGCTAGATTGTaGTTGAGGCTCCCCCTGCCC +
Preference number: 2 (lower is better)
Translates to: HHVKGEGPLHDHQHSLPTRTARL*LRLPLP
Trigger: GGGCAGGGGGAGCCTCAAGCACAATCTAGCTGTCCT...TGTCGGGAGGCTGTGCTGGTGGTCGTGTAGAGGTCCTTCTCCTTTCACATGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
3UTR-3UTR GCA 90 bp GGGCACTTCTGGTGGCCAAGTACAGAAAGTCTGTGCCCCAGAAGCAGCCTGGACAGCCACAAGGGGCTATaGACTCAGAAGGGACCTGAG +
Preference number: 2 (lower is better)
Translates to: GHFWWPSTESLCPRSSLDSHKGL*TQKGPE
Trigger: CTCAGGTCCCTTCTGAGTGCATAGCCCCTTGTGGCT...GTCCAGGCTGCTTCTGGGGCACAGACTTTCTGTACTTGGCCACCAGAAGTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR-3UTR CCA 90 bp TCAACTCGATGCCTTCAACCACGTTCACCATCAACCTTCCAATGCCTGTTGCCCTGTGTGGCCGTGGGCTaGGACCCTGCTGAGCACACC +
Preference number: 2 (lower is better)
Translates to: STRCLQPRSPSTFQCLLPCVAVG*DPAEHT
Trigger: GGTGTGCTCAGCAGGGTCCCAGCCCACGGCCACACA...GGGCAACAGGCATTGGAAGGTTGATGGTGAACGTGGTTGAAGGCATCGAGTTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381285.8
3UTR-3UTR CCA 90 bp ATTGTTTCGGGGCAGGGAGGATTGTCGAGAATGATTCCTAGGAGCTTTGAGGGGTGTGTGGCCGTGGGCTaGGACCCTGCTGAGCACACC +
Preference number: 2 (lower is better)
Translates to: IVSGQGGLSRMIPRSFEGCVAVG*DPAEHT
Trigger: GGTGTGCTCAGCAGGGTCCCAGCCCACGGCCACACA...CCCCTCAAAGCTCCTAGGAATCATTCTCGACAATCCTCCCTGCCCCGAAACAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
3UTR-3UTR CCA 90 bp GCCCGTCCAGCTGCCGCCCAGCTTCTAGGAGGGTGGCCTGGACCAGGATGGGGACTTCTGTCTTTCATGTaGACTAAGTTTCCATGCCTA +
Preference number: 2 (lower is better)
Translates to: ARPAAAQLLGGWPGPGWGLLSFM*TKFPCL
Trigger: TAGGCATGGAAACTTAGTCCACATGAAAGACAGAAG...TCCCCATCCTGGTCCAGGCCACCCTCCTAGAAGCTGGGCGGCAGCTGGACGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR-3UTR TCA 90 bp GCCCGTCCAGCTGCCGCCCAGCTTCTAGGAGGGTGGCCTGGACCAGGATGGGGAAACAGGAGGGTTACATaGGTTCTCCAAAAATATAGA +
Preference number: 2 (lower is better)
Translates to: ARPAAAQLLGGWPGPGWGNRRVT*VLQKYR
Trigger: TCTATATTTTTGGAGAACTCATGTAACCCTCCTGTT...TCCCCATCCTGGTCCAGGCCACCCTCCTAGAAGCTGGGCGGCAGCTGGACGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR-3UTR CCA 90 bp ACGCTATTAATGAAATGCCCCTGGAGAACACTTGCAGAACTTCCCGTAGTCCGGCAGCATGTGTGGCCGTaGGCTGGGACCCTGCTGAGC +
Preference number: 2 (lower is better)
Translates to: TLLMKCPWRTLAELPVVRQHVWP*AGTLLS
Trigger: GCTCAGCAGGGTCCCAGCCCACGGCCACACATGCTG...CCGGACTACGGGAAGTTCTGCAAGTGTTCTCCAGGGGCATTTCATTAATAGCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR-3UTR CCA 90 bp ACAGAATCCTCCTTAGGTGGCCTAAGGGGCACTTCTGGTGGCCAAGTACAGAAACTCACTGGAGACCCCTaGCGCGCTAGGCTTGAACCC +
Preference number: 2 (lower is better)
Translates to: TESSLGGLRGTSGGQVQKLTGDP*RARLEP
Trigger: GGGTTCAAGCCTAGCGCGCCAGGGGTCTCCAGTGAG...TTTCTGTACTTGGCCACCAGAAGTGCCCCTTAGGCCACCTAAGGAGGATTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR-3UTR CCA 90 bp ACGCTATTAATGAAATGCCCCTGGAGAACACTTGCAGAACTTCCCGTAGTCCGGTGGGCAGGGAGGCACTaGCTCCGCAGACTCCCCTTC +
Preference number: 2 (lower is better)
Translates to: TLLMKCPWRTLAELPVVRWAGRH*LRRLPF
Trigger: GAAGGGGAGTCTGCGGAGCCAGTGCCTCCCTGCCCA...CCGGACTACGGGAAGTTCTGCAAGTGTTCTCCAGGGGCATTTCATTAATAGCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR CAA 90 bp AGTGGACCAGGGTGCCTGGACAGCTGGCTTAGCTGGTTCTTGGTGTaGATGGAAAAGCCGACCCAGCTTGTCTTGTGCTTCCTGTTTGCC +
Preference number: 2 (lower is better)
Translates to: SGPGCLDSWLSWFLV*MEKPTQLVLCFLFA
Trigger: GGCAAACAGGAAGCACAAGACAAGCTGGGTCGGCTTTTCCATCAACACCAAGAACCAGCTAAGCCAGCTGTCCAGGCACCCTGGTCCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379960.9
3UTR CAA 90 bp GCGGCTGCTGCTCACCCAACGCTGCAAAGCCACTACACCCTTTCTTaGGTTCCTGTCTGCCTGAGGCCCCCATTCTGTTTAGATACAGGA +
Preference number: 2 (lower is better)
Translates to: AAAAHPTLQSHYTLS*VPVCLRPPFCLDTG
Trigger: TCCTGTATCTAAACAGAATGGGGGCCTCAGGCAGACAGGAACCAAAGAAAGGGTGTAGTGGCTTTGCAGCGTTGGGTGAGCAGCAGCCGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR CAA 90 bp ACACAAGAGCAATGCCTAGCAGCTGCGGTAGGTGGAGCCGGCACCTaGAAATCTGCCAGTGAAAACAGCGAGTTTCCTCCTCCTACAGGG +
Preference number: 2 (lower is better)
Translates to: TQEQCLAAAVGGAGT*KSASENSEFPPPTG
Trigger: CCCTGTAGGAGGAGGAAACTCGCTGTTTTCACTGGCAGATTTCAAGGTGCCGGCTCCACCTACCGCAGCTGCTAGGCATTGCTCTTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR-3UTR TCA 90 bp AAAGCTGATGCAGAAAGGGTGGGAAGCCTGAGGACCTCCGTGCAGCCCCAGCCTCATCCCATATCCCTGTaGCTGAATACCAAATGGTGG +
Preference number: 2 (lower is better)
Translates to: KADAERVGSLRTSVQPQPHPISL*LNTKWW
Trigger: CCACCATTTGGTATTCAGTCACAGGGATATGGGATG...AGGCTGGGGCTGCACGGAGGTCCTCAGGCTTCCCACCCTTTCTGCATCAGCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR-3UTR TCA 90 bp GGGCACTTCTGGTGGCCAAGTACAGAAAGTCTGTGCCCCAGAAGCAGCCTGGACTACAGCATAACCCTATaGCCAGCACAGCCCCTTCTT +
Preference number: 2 (lower is better)
Translates to: GHFWWPSTESLCPRSSLDYSITL*PAQPLL
Trigger: AAGAAGGGGCTGTGCTGGTCATAGGGTTATGCTGTA...GTCCAGGCTGCTTCTGGGGCACAGACTTTCTGTACTTGGCCACCAGAAGTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR-3UTR TCA 90 bp TCATCAAACAACTGCAGGTCCAAGCGGACCACAATCTCTCCCGTGGGGACTTCGCCCTCTCGAACACAGTaGTGCAGAGGACTTCCTGCT +
Preference number: 2 (lower is better)
Translates to: SSNNCRSKRTTISPVGTSPSRTQ*CRGLPA
Trigger: AGCAGGAAGTCCTCTGCATCACTGTGTTCGAGAGGG...CGAAGTCCCCACGGGAGAGATTGTGGTCCGCTTGGACCTGCAGTTGTTTGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381285.8
3UTR-3UTR GCA 90 bp GGCACTTGGAACGGTGAGAGAGGGCTGGGCTGCCCATGCATCCCAGTTATCCGTCGCTGCTTTTCCAGTTaGTTCTCCAGTTCCAGTTGT +
Preference number: 2 (lower is better)
Translates to: GTWNGERGLGCPCIPVIRRCFSS*FSSSSC
Trigger: ACAACTGGAACTGGAGAAGCAACTGGAAAAGCAGCG...ACGGATAACTGGGATGCATGGGCAGCCCAGCCCTCTCTCACCGTTCCAAGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379960.9
3UTR-3UTR GCA 90 bp CTTCTAGAACTTGAGGCTACTTACACAGAGGGATCTTTTCTCTCCTACCATCCCGGAGCCCAGAGCTCCTaGCACCACCGGCAACCCCCT +
Preference number: 2 (lower is better)
Translates to: LLELEATYTEGSFLSYHPGAQSS*HHRQPP
Trigger: AGGGGGTTGCCGGTGGTGGCAGGAGCTCTGGGCTCC...GGGATGGTAGGAGAGAAAAGATCCCTCTGTGTAAGTAGCCTCAAGTTCTAGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR-3UTR GCA 90 bp GGACCTTTGGAGCCCTGGTCTTTCTTGATGTCCGCCACACGGATCTCCGTCCGATTTTTCCCACGTGCTTaGAGCTCTCCTTCCCACCAT +
Preference number: 2 (lower is better)
Translates to: GPLEPWSFLMSATRISVRFFPRA*SSPSHH
Trigger: ATGGTGGGAAGGAGAGCTGCAAGCACGTGGGAAAAA...TCGGACGGAGATCCGTGTGGCGGACATCAAGAAAGACCAGGGCTCCAAAGGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381285.8
3UTR-3UTR CCA 90 bp GAAACGACCGGCTTGGCTGCTGGAGAGGCTACTCGCTTTAGACTAGCAGGACTCTCCACTTCATCCAGTTaGTCTCGTAGGTGCTGCCGA +
Preference number: 2 (lower is better)
Translates to: ETTGLAAGEATRFRLAGLSTSSS*SRRCCR
Trigger: TCGGCAGCACCTACGAGACCAACTGGATGAAGTGGA...GAGTCCTGCTAGTCTAAAGCGAGTAGCCTCTCCAGCAGCCAAGCCGGTCGTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379960.9
3UTR-3UTR CCA 90 bp CAGTTATCCGTTTCTGGTTTCTCATTCGTGCTGGTGGGCCACGTGGAGCTGAAGGGGTGCCTGGACAGCTaGCTTAGCTGGTTCTTGGTG +
Preference number: 2 (lower is better)
Translates to: QLSVSGFSFVLVGHVELKGCLDS*LSWFLV
Trigger: CACCAAGAACCAGCTAAGCCAGCTGTCCAGGCACCC...CTTCAGCTCCACGTGGCCCACCAGCACGAATGAGAAACCAGAAACGGATAACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379960.9
3UTR-3UTR CCA 90 bp GGGATTTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAGGAACAGCATGTGTGGCCGTaGGCTGGGACCCTGCTGAGC +
Preference number: 2 (lower is better)
Translates to: GISATLEAIMRPVVRTKEQHVWP*AGTLLS
Trigger: GCTCAGCAGGGTCCCAGCCCACGGCCACACATGCTG...TTCCTTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAAATCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
3UTR-3UTR CCA 90 bp TTGCTCTTTCCATGTGACCGACAGGGTTTCAACTCGATGCCTTCAACCACGTTCTCCAGACAGCATGTGTaGCCGTGGGCTGGGACCCTG +
Preference number: 2 (lower is better)
Translates to: LLFPCDRQGFNSMPSTTFSRQHV*PWAGTL
Trigger: CAGGGTCCCAGCCCACGGCCACACATGCTGTCTGGA...GAACGTGGTTGAAGGCATCGAGTTGAAACCCTGTCGGTCACATGGAAAGAGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381285.8
3UTR-3UTR CCA 90 bp GAAACTTCCATAGACCAGCTCTTCAAAGAGCTAAGCCAGGGCCTGATCAGACCGCTCATGAATCACAGCTaGGTCCGAGGGCCAGCCCGA +
Preference number: 2 (lower is better)
Translates to: ETSIDQLFKELSQGLIRPLMNHS*VRGPAR
Trigger: TCGGGCTGGCCCTCGGACCCAGCTGTGATTCATGAG...CGGTCTGATCAGGCCCTGGCTTAGCTCTTTGAAGAGCTGGTCTATGGAAGTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR-3UTR CCA 90 bp ACAGAATCCTCCTTAGGTGGCCTAAGGGGCACTTCTGGTGGCCAAGTACAGAAACCCCTGGAGGACACCTaGGCTTTGGTACCAGGTCAC +
Preference number: 2 (lower is better)
Translates to: TESSLGGLRGTSGGQVQKPLEDT*ALVPGH
Trigger: GTGACCTGGTACCAAAGCCCAGGTGTCCTCCAGGGG...TTTCTGTACTTGGCCACCAGAAGTGCCCCTTAGGCCACCTAAGGAGGATTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR-3UTR CCA 90 bp ACAGAATCCTCCTTAGGTGGCCTAAGGGGCACTTCTGGTGGCCAAGTACAGAAAGTCCTAGCCAGTTCCTaGAGAGACAGCCGGCCTGCT +
Preference number: 2 (lower is better)
Translates to: TESSLGGLRGTSGGQVQKVLASS*RDSRPA
Trigger: AGCAGGCCGGCTGTCTCTCCAGGAACTGGCTAGGAC...TTTCTGTACTTGGCCACCAGAAGTGCCCCTTAGGCCACCTAAGGAGGATTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR-3UTR CCA 90 bp CAGCCAGAGGGCATCGTTCTAAGGAAGGAGAGTCAGGGCCTGTTTGGGGTTGGTATCCAGAGGAAGCTGTaGGGCGCCATTAAGTTGACC +
Preference number: 2 (lower is better)
Translates to: QPEGIVLRKESQGLFGVGIQRKL*GAIKLT
Trigger: GGTCAACTTAATGGCGCCCCACAGCTTCCTCTGGAT...ACCAACCCCAAACAGGCCCTGACTCTCCTTCCTTAGAACGATGCCCTCTGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR-3UTR GCA 90 bp CTGCACCATGTGAAAGGAGAAGGACCTCTACACGACCACCAGCACAGCCTCCCGGATACTGAACTCCTCTaGACTTCTATGGTAAGGGGG +
Preference number: 2 (lower is better)
Translates to: LHHVKGEGPLHDHQHSLPDTELL*TSMVRG
Trigger: CCCCCTTACCATAGAAGTGCAGAGGAGTTCAGTATC...CGGGAGGCTGTGCTGGTGGTCGTGTAGAGGTCCTTCTCCTTTCACATGGTGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
3UTR-3UTR GCA 90 bp AGCCAAAAGAGATTTTTCCAACATGGCTGCCAACCGAGACCCAGTGACCCAACACTTTGCCCCGGGATGTaGGGGGCTTGCATCCTCCTA +
Preference number: 2 (lower is better)
Translates to: SQKRFFQHGCQPRPSDPTLCPGM*GACILL
Trigger: TAGGAGGATGCAAGCCCCGCACATCCCGGGGCAAAG...TGTTGGGTCACTGGGTCTCGGTTGGCAGCCATGTTGGAAAAATCTCTTTTGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR-3UTR GCA 90 bp ACAGAATCCTCCTTAGGTGGCCTAAGGGGCACTTCTGGTGGCCAAGTACAGAAAAGTGTCTTAGGTCTTTaGCCCGGGATGTGCGGGGCT +
Preference number: 2 (lower is better)
Translates to: TESSLGGLRGTSGGQVQKSVLGL*PGMCGA
Trigger: AGCCCCGCACATCCCGGGGCAAAGACCTAAGACACT...TTTCTGTACTTGGCCACCAGAAGTGCCCCTTAGGCCACCTAAGGAGGATTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR-3UTR GCA 90 bp ACGCTATTAATGAAATGCCCCTGGAGAACACTTGCAGAACTTCCCGTAGTCCGGCCAGCCTTCGGTCTCTaGCAGGCCCACATTCCTAGC +
Preference number: 2 (lower is better)
Translates to: TLLMKCPWRTLAELPVVRPAFGL*QAHIPS
Trigger: GCTAGGAATGTGGGCCTGGCAGAGACCGAAGGCTGG...CCGGACTACGGGAAGTTCTGCAAGTGTTCTCCAGGGGCATTTCATTAATAGCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR-3UTR CCA 90 bp AAAGCTGATGCAGAAAGGGTGGGAAGCCTGAGGACCTCCGTGCAGCCCCAGCCTATAGGACACTATGAGTaGGTGACCTGGGACCTAAAA +
Preference number: 2 (lower is better)
Translates to: KADAERVGSLRTSVQPQPIGHYE*VTWDLK
Trigger: TTTTAGGTCCCAGGTCACCCACTCATAGTGTCCTAT...AGGCTGGGGCTGCACGGAGGTCCTCAGGCTTCCCACCCTTTCTGCATCAGCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR-3UTR CCA 90 bp GGGCACTTCTGGTGGCCAAGTACAGAAAGTCTGTGCCCCAGAAGCAGCCTGGACGTTCTGTGTGGTCAGTaGCTTTACACTTGTCCTAGC +
Preference number: 2 (lower is better)
Translates to: GHFWWPSTESLCPRSSLDVLCGQ*LYTCPS
Trigger: GCTAGGACAAGTGTAAAGCCACTGACCACACAGAAC...GTCCAGGCTGCTTCTGGGGCACAGACTTTCTGTACTTGGCCACCAGAAGTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR-3UTR TCA 90 bp CAGTTATCCGTTTCTGGTTTCTCATTCGTGCTGGTGGGCCACGTGGAGCTGAAGGGCAGGGGCAGATGTTaGATCAGTCACTGGTTTCAC +
Preference number: 2 (lower is better)
Translates to: QLSVSGFSFVLVGHVELKGRGRC*ISHWFH
Trigger: GTGAAACCAGTGACTGATTCAACATCTGCCCCTGCC...CTTCAGCTCCACGTGGCCCACCAGCACGAATGAGAAACCAGAAACGGATAACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379960.9
ENST00000419241.1
3UTR-3UTR TCA 90 bp CAGCCAGAGGGCATCGTTCTAAGGAAGGAGAGTCAGGGCCTGTTTGGGGTTGGTGTCCGGAAGATTGCATaGCGCATGAAAACAAAGCCA +
Preference number: 2 (lower is better)
Translates to: QPEGIVLRKESQGLFGVGVRKIA*RMKTKP
Trigger: TGGCTTTGTTTTCATGCGTCATGCAATCTTCCGGAC...ACCAACCCCAAACAGGCCCTGACTCTCCTTCCTTAGAACGATGCCCTCTGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR-3UTR TCA 90 bp CAGCCAGAGGGCATCGTTCTAAGGAAGGAGAGTCAGGGCCTGTTTGGGGTTGGTTTCCAAGGCTGCGCCTaGACAAAGAAATCTCTGAAC +
Preference number: 2 (lower is better)
Translates to: QPEGIVLRKESQGLFGVGFQGCA*TKKSLN
Trigger: GTTCAGAGATTTCTTTGTTCAGGCGCAGCCTTGGAA...ACCAACCCCAAACAGGCCCTGACTCTCCTTCCTTAGAACGATGCCCTCTGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR-3UTR TCA 90 bp GAAACTTCCATAGACCAGCTCTTCAAAGAGCTAAGCCAGGGCCTGATCAGACCGAGCCCTGGTCTTTCTTaGTGTCCGCCACACGGATCT +
Preference number: 2 (lower is better)
Translates to: ETSIDQLFKELSQGLIRPSPGLS*CPPHGS
Trigger: AGATCCGTGTGGCGGACATCAAGAAAGACCAGGGCT...CGGTCTGATCAGGCCCTGGCTTAGCTCTTTGAAGAGCTGGTCTATGGAAGTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381285.8
3UTR-3UTR GCA 90 bp GCTGCCCATGCATCCCAGTTATCCGTTTCTGGTTTCTCATTCGTGCTGGTGGGCTCTCCAGTTCCAGGTTaGCACGTTCAAAGTTCTCCC +
Preference number: 2 (lower is better)
Translates to: AAHASQLSVSGFSFVLVGSPVPG*HVQSSP
Trigger: GGGAGAACTTTGAACGTGGCAACCTGGAACTGGAGA...GCCCACCAGCACGAATGAGAAACCAGAAACGGATAACTGGGATGCATGGGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379960.9
3UTR-3UTR GCA 90 bp CTGCCCATGCATCCCAGTTATCCGTTTCTGGTTTCTCATTCGTGCTGGTGGGCCTGTTCCAGGAGAGCTTaGCTTCGTTTCTCCAGTTCC +
Preference number: 2 (lower is better)
Translates to: LPMHPSYPFLVSHSCWWACSRRA*LRFSSS
Trigger: GGAACTGGAGAAACGAAGGCAAGCTCTCCTGGAACA...GGCCCACCAGCACGAATGAGAAACCAGAAACGGATAACTGGGATGCATGGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379960.9
3UTR-3UTR CCA 90 bp ATCCGTTTCTGGTTTCTCATTCGTGCTGGTGGGCCACGTGGAGCTGAAGTCGGCGACAGCTGGCTTAGCTaGTTCTTGGTGTTGATGGAA +
Preference number: 2 (lower is better)
Translates to: IRFWFLIRAGGPRGAEVGDSWLS*FLVLME
Trigger: TTCCATCAACACCAAGAACCAGCTAAGCCAGCTGTC...GCCGACTTCAGCTCCACGTGGCCCACCAGCACGAATGAGAAACCAGAAACGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379960.9
3UTR-3UTR CCA 90 bp GGGCACTTCTGGTGGCCAAGTACAGAAAGTCTGTGCCCCAGAAGCAGCCTGGACCAGCCTTCCCAGAAATaGATTCATCTTCTGGGTCAT +
Preference number: 2 (lower is better)
Translates to: GHFWWPSTESLCPRSSLDQPSQK*IHLLGH
Trigger: ATGACCCAGAAGATGAATCCATTTCTGGGAAGGCTG...GTCCAGGCTGCTTCTGGGGCACAGACTTTCTGTACTTGGCCACCAGAAGTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR-3UTR CCA 90 bp AGCCAAAAGAGATTTTTCCAACATGGCTGCCAACCGAGACCCAGTGACCCAACATCATCCGTCTTCTGCTaGATCAGGGCAGCCCCGTTG +
Preference number: 2 (lower is better)
Translates to: SQKRFFQHGCQPRPSDPTSSVFC*IRAAPL
Trigger: CAACGGGGCTGCCCTGATCCAGCAGAAGACGGATGA...TGTTGGGTCACTGGGTCTCGGTTGGCAGCCATGTTGGAAAAATCTCTTTTGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000381285.8
3UTR-3UTR TCA 90 bp GTTGACCAGCCAATTACTTCCTCCGTGTCAGGTCTAACCAGAAGAGGTCTGCATAGGCCTGGATCCGAATaGGCCACATCTTCAGGCTCT +
Preference number: 2 (lower is better)
Translates to: VDQPITSSVSGLTRRGLHRPGSE*ATSSGS
Trigger: AGAGCCTGAAGATGTGGCTCATTCGGATCCAGGCCT...ATGCAGACCTCTTCTGGTTAGACCTGACACGGAGGAAGTAATTGGCTGGTCAAC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR-3UTR TCA 90 bp ACAGAATCCTCCTTAGGTGGCCTAAGGGGCACTTCTGGTGGCCAAGTACAGAAAGGGGCGCCATTAAGTTaGCCAGCCAATTACTTCCTC +
Preference number: 2 (lower is better)
Translates to: TESSLGGLRGTSGGQVQKGAPLS*PANYFL
Trigger: GAGGAAGTAATTGGCTGGTCAACTTAATGGCGCCCC...TTTCTGTACTTGGCCACCAGAAGTGCCCCTTAGGCCACCTAAGGAGGATTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR-3UTR GCA 90 bp TCAATTTCTTTCCTCCTCTCCTCCTCTCTCTGCCGTTCTAGCTCCCGCTGCTTTGTTCCAGTTGTCTTTTaGGCTCTTGCTCCTGGCGCT +
Preference number: 2 (lower is better)
Translates to: SISFLLSSSLCRSSSRCFVPVVF*ALAPGA
Trigger: AGCGCCAGGAGCAAGAGCGCAAAAGACAACTGGAAC...AAAGCAGCGGGAGCTAGAACGGCAGAGAGAGGAGGAGAGGAGGAAAGAAATTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379960.9
3UTR-3UTR GCA 90 bp ATCCGTTTCTGGTTTCTCATTCGTGCTGGTGGGCCACGTGGAGCTGAAGTCGGCGTGCTCTCAATTTCTTaGCTTTGGGTGGTCAATCGA +
Preference number: 2 (lower is better)
Translates to: IRFWFLIRAGGPRGAEVGVLSIS*LWVVNR
Trigger: TCGATTGACCACCCAAAGGCAAGAAATTGAGAGCAC...GCCGACTTCAGCTCCACGTGGCCCACCAGCACGAATGAGAAACCAGAAACGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379960.9
3UTR-3UTR GCA 90 bp GTTGACCAGCCAATTACTTCCTCCGTGTCAGGTCTAACCAGAAGAGGTCTGCATGGGATTACAGGTGCCTaGCACCACCCCTGGCTAATT +
Preference number: 2 (lower is better)
Translates to: VDQPITSSVSGLTRRGLHGITGA*HHPWLI
Trigger: AATTAGCCAGGGGTGGTGGCAGGCACCTGTAATCCC...ATGCAGACCTCTTCTGGTTAGACCTGACACGGAGGAAGTAATTGGCTGGTCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR-3UTR GCA 90 bp GAAGGAACGGCTATAACGGTGCACATGCTGGAAACTTCCATAGACCAGCTCTTCGCGCTTTTTCCCACGTaGTTGCAGCTCTCCTTCCCA +
Preference number: 2 (lower is better)
Translates to: EGTAITVHMLETSIDQLFALFPT*LQLSFP
Trigger: TGGGAAGGAGAGCTGCAAGCACGTGGGAAAAAGCGC...GAAGAGCTGGTCTATGGAAGTTTCCAGCATGTGCACCGTTATAGCCGTTCCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381285.8
3UTR-3UTR CCA 90 bp TTGTTTCATGAAACAGGAAATTGTTTCGGGGCAGGGAGGATTGTCGAGAATGATTGTGTGGCCGTGGGCTaGGACCCTGCTGAGCACACC +
Preference number: 2 (lower is better)
Translates to: LFHETGNCFGAGRIVENDCVAVG*DPAEHT
Trigger: GGTGTGCTCAGCAGGGTCCCAGCCCACGGCCACACA...ATCATTCTCGACAATCCTCCCTGCCCCGAAACAATTTCCTGTTTCATGAAACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
3UTR-3UTR CCA 90 bp TTTTTGAAAAATCTCTGTGACCAGCTGCAGGTCATTCACATAGTTCTCCTCGGTCAGCATGTGTGGCCGTaGGCTGGGACCCTGCTGAGC +
Preference number: 2 (lower is better)
Translates to: FLKNLCDQLQVIHIVLLGQHVWP*AGTLLS
Trigger: GCTCAGCAGGGTCCCAGCCCACGGCCACACATGCTG...ACCGAGGAGAACTATGTGAATGACCTGCAGCTGGTCACAGAGATTTTTCAAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000381285.8
3UTR-3UTR CCA 90 bp GTCCCTCTCGAACACAGTGATGCAGAGGACTTCCTGCTCCAGGTCTCGGATGAAGCCAAGAAGTCTACTTaGGGACTGGTGGATGTAAGA +
Preference number: 2 (lower is better)
Translates to: VPLEHSDAEDFLLQVSDEAKKST*GLVDVR
Trigger: TCTTACATCCACCAGTCCCCAAGTAGACTTCTTGGC...TTCATCCGAGACCTGGAGCAGGAAGTCCTCTGCATCACTGTGTTCGAGAGGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381285.8
3UTR-3UTR CCA 90 bp CAGCCAGAGGGCATCGTTCTAAGGAAGGAGAGTCAGGGCCTGTTTGGGGTTGGTAGAAACACAAGCATTTaGTCTCACTGGTCCACTCCA +
Preference number: 2 (lower is better)
Translates to: QPEGIVLRKESQGLFGVGRNTSI*SHWSTP
Trigger: TGGAGTGGACCAGTGAGACCAAATGCTTGTGTTTCT...ACCAACCCCAAACAGGCCCTGACTCTCCTTCCTTAGAACGATGCCCTCTGGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR CAA 90 bp GATTCCGTTCCCACTCAAGTTGTCGTTGCCTTTCAAGTTCCCGTTTaGCAGCCTCTCGCCTCTCAATTTCTTTCCTCCTCTCCTCCTCTC +
Preference number: 2 (lower is better)
Translates to: DSVPTQVVVAFQVPV*QPLASQFLSSSPPL
Trigger: GAGAGGAGGAGAGGAGGAAAGAAATTGAGAGGCGAGAGGCTGCAAAACGGGAACTTGAAAGGCAACGACAACTTGAGTGGGAACGGAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379960.9
3UTR-3UTR TCA 90 bp CACCATGTGAAAGGAGAAGGACCTCTACACGACCACCAGCACAGCCTCCCGACATCAACAAGGTACAGCTaGTACACACAAACAAGCACA +
Preference number: 2 (lower is better)
Translates to: HHVKGEGPLHDHQHSLPTSTRYS*YTQTST
Trigger: TGTGCTTGTTTGTGTGTATCAGCTGTACCTTGTTGA...TGTCGGGAGGCTGTGCTGGTGGTCGTGTAGAGGTCCTTCTCCTTTCACATGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
3UTR-3UTR TCA 90 bp ACAGAATCCTCCTTAGGTGGCCTAAGGGGCACTTCTGGTGGCCAAGTACAGAAAAACAAGCATATTATGTaGGGTTGGGGTGGTGGAGGG +
Preference number: 2 (lower is better)
Translates to: TESSLGGLRGTSGGQVQKNKHIM*GWGGGG
Trigger: CCCTCCACCACCCCAACCTCACATAATATGCTTGTT...TTTCTGTACTTGGCCACCAGAAGTGCCCCTTAGGCCACCTAAGGAGGATTCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR-3UTR TCA 90 bp ACGCTATTAATGAAATGCCCCTGGAGAACACTTGCAGAACTTCCCGTAGTCCGGAGAGGCCCAATGGTTTaGGACTCCATGCATCACCCA +
Preference number: 2 (lower is better)
Translates to: TLLMKCPWRTLAELPVVRRGPMV*DSMHHP
Trigger: TGGGTGATGCATGGAGTCTCAAACCATTGGGCCTCT...CCGGACTACGGGAAGTTCTGCAAGTGTTCTCCAGGGGCATTTCATTAATAGCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR-3UTR TCA 90 bp GTTGACCAGCCAATTACTTCCTCCGTGTCAGGTCTAACCAGAAGAGGTCTGCATAAGGAGAGCAGGGACTaGGCCACGTCTTCATCAGAA +
Preference number: 2 (lower is better)
Translates to: VDQPITSSVSGLTRRGLHKESRD*ATSSSE
Trigger: TTCTGATGAAGACGTGGCTCAGTCCCTGCTCTCCTT...ATGCAGACCTCTTCTGGTTAGACCTGACACGGAGGAAGTAATTGGCTGGTCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR-3UTR TCA 90 bp GAAACTTCCATAGACCAGCTCTTCAAAGAGCTAAGCCAGGGCCTGATCAGACCGGTTCAGAAGCAGCTTTaGTTTTCTGCACCCAGGCAG +
Preference number: 2 (lower is better)
Translates to: ETSIDQLFKELSQGLIRPVQKQL*FSAPRQ
Trigger: CTGCCTGGGTGCAGAAAATCAAAGCTGCTTCTGAAC...CGGTCTGATCAGGCCCTGGCTTAGCTCTTTGAAGAGCTGGTCTATGGAAGTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381285.8
3UTR-3UTR GCA 90 bp AAAGCTGATGCAGAAAGGGTGGGAAGCCTGAGGACCTCCGTGCAGCCCCAGCCTAAGAAAGAAAGAAAATaGCCCCCATTTGATCAAGCA +
Preference number: 2 (lower is better)
Translates to: KADAERVGSLRTSVQPQPKKERK*PPFDQA
Trigger: TGCTTGATCAAATGGGGGGCATTTTCTTTCTTTCTT...AGGCTGGGGCTGCACGGAGGTCCTCAGGCTTCCCACCCTTTCTGCATCAGCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR-3UTR GCA 90 bp CTTCTAGAACTTGAGGCTACTTACACAGAGGGATCTTTTCTCTCCTACCATCCCAGAGCTAGAGGGAGCTaGCCCGTGAATGGCAGCTGT +
Preference number: 2 (lower is better)
Translates to: LLELEATYTEGSFLSYHPRARGS*PVNGSC
Trigger: ACAGCTGCCATTCACGGGGCAGCTCCCTCTAGCTCT...GGGATGGTAGGAGAGAAAAGATCCCTCTGTGTAAGTAGCCTCAAGTTCTAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR-3UTR CCA 90 bp TGGGGGCAGGGGCAGATGTTGAATCAGTCACTGGTTTCACTGGAGCGGGAACCTTCAATTTCTTGCCTTTaGGTGGTCAATCGACATCTG +
Preference number: 2 (lower is better)
Translates to: WGQGQMLNQSLVSLEREPSISCL*VVNRHL
Trigger: CAGATGTCGATTGACCACCCAAAGGCAAGAAATTGA...AGGTTCCCGCTCCAGTGAAACCAGTGACTGATTCAACATCTGCCCCTGCCCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379960.9
3UTR-3UTR CCA 90 bp CAGCCAGAGGGCATCGTTCTAAGGAAGGAGAGTCAGGGCCTGTTTGGGGTTGGTTATGAGTGGGTGACCTaGGACCTAAAACGATTGTTT +
Preference number: 2 (lower is better)
Translates to: QPEGIVLRKESQGLFGVGYEWVT*DLKRLF
Trigger: AAACAATCGTTTTAGGTCCCAGGTCACCCACTCATA...ACCAACCCCAAACAGGCCCTGACTCTCCTTCCTTAGAACGATGCCCTCTGGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR-3UTR CCA 90 bp CTTCTAGAACTTGAGGCTACTTACACAGAGGGATCTTTTCTCTCCTACCATCCCAGCAGCTGCGGTAGGTaGAGCCGGCACCTTGAAATC +
Preference number: 2 (lower is better)
Translates to: LLELEATYTEGSFLSYHPSSCGR*SRHLEI
Trigger: GATTTCAAGGTGCCGGCTCCACCTACCGCAGCTGCT...GGGATGGTAGGAGAGAAAAGATCCCTCTGTGTAAGTAGCCTCAAGTTCTAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR CAA 90 bp CGCTGCTGTTCCAGGAGAGCTTGCCTTCGTTTCTCCAGTTCCAGGTaGCCACGTTCAAAGTTCTCCCGCTTCTTATCTTCAAACGTTACT +
Preference number: 2 (lower is better)
Translates to: RCCSRRACLRFSSSR*PRSKFSRFLSSNVT
Trigger: AGTAACGTTTGAAGATAAGAAGCGGGAGAACTTTGAACGTGGCAACCTGGAACTGGAGAAACGAAGGCAAGCTCTCCTGGAACAGCAGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379960.9
3UTR-3UTR TCA 90 bp CACCATGTGAAAGGAGAAGGACCTCTACACGACCACCAGCACAGCCTCCCGACACACACAAACGGACCATaGGCTCCATTTCATATTAAT +
Preference number: 2 (lower is better)
Translates to: HHVKGEGPLHDHQHSLPTHTNGP*APFHIN
Trigger: ATTAATATGAAATGGAGCTCATGGTCCGTTTGTGTG...TGTCGGGAGGCTGTGCTGGTGGTCGTGTAGAGGTCCTTCTCCTTTCACATGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
3UTR-3UTR TCA 90 bp CACCATGTGAAAGGAGAAGGACCTCTACACGACCACCAGCACAGCCTCCCGACAAGCAGGCATTTTTATTaGGAGCTTCCAACTAGTGTT +
Preference number: 2 (lower is better)
Translates to: HHVKGEGPLHDHQHSLPTSRHFY*ELPTSV
Trigger: AACACTAGTTGGAAGCTCTCAATAAAAATGCCTGCT...TGTCGGGAGGCTGTGCTGGTGGTCGTGTAGAGGTCCTTCTCCTTTCACATGGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
3UTR-3UTR TCA 90 bp CTTATGGTGGCTCAGACTATACTGTCTGAGGGCTTCATCATGCTACCGGTTTCTGGAGAGATGGGATTCTaGAGCAATGACAGGACCGTC +
Preference number: 2 (lower is better)
Translates to: LMVAQTILSEGFIMLPVSGEMGF*SNDRTV
Trigger: GACGGTCCTGTCATTGCTTCAGAATCCCATCTCTCC...AGAAACCGGTAGCATGATGAAGCCCTCAGACAGTATAGTCTGAGCCACCATAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR-3UTR GCA 90 bp TTCTGTTTCAGTCGTTCAGCCTCCATGGACTTTTGCTTCTGGAGTTGTTGCTTATCCTGCTCCTTGCGCTaGTGTTCCAGGAGAGCTTGC +
Preference number: 2 (lower is better)
Translates to: FCFSRSASMDFCFWSCCLSCSLR*CSRRAC
Trigger: GCAAGCTCTCCTGGAACAGCAGCGCAAGGAGCAGGA...TAAGCAACAACTCCAGAAGCAAAAGTCCATGGAGGCTGAACGACTGAAACAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379960.9
3UTR-3UTR GCA 90 bp ACAGAATCCTCCTTAGGTGGCCTAAGGGGCACTTCTGGTGGCCAAGTACAGAAAATATCACCTCATGAGTaGAGCCTGACGGACAAGGAA +
Preference number: 2 (lower is better)
Translates to: TESSLGGLRGTSGGQVQKISPHE*SLTDKE
Trigger: TTCCTTGTCCGTCAGGCTGCACTCATGAGGTGATAT...TTTCTGTACTTGGCCACCAGAAGTGCCCCTTAGGCCACCTAAGGAGGATTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR-3UTR GCA 90 bp GAAACTTCCATAGACCAGCTCTTCAAAGAGCTAAGCCAGGGCCTGATCAGACCGAGGGTTTCAACTCGATaGCTTCAACCACGTTCACCA +
Preference number: 2 (lower is better)
Translates to: ETSIDQLFKELSQGLIRPRVSTR*LQPRSP
Trigger: TGGTGAACGTGGTTGAAGGCATCGAGTTGAAACCCT...CGGTCTGATCAGGCCCTGGCTTAGCTCTTTGAAGAGCTGGTCTATGGAAGTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381285.8
3UTR-3UTR CCA 90 bp GTTGACCAGCCAATTACTTCCTCCGTGTCAGGTCTAACCAGAAGAGGTCTGCATAGCATTTGGTCTCACTaGTCCACTCCAGGGAAAAGG +
Preference number: 2 (lower is better)
Translates to: VDQPITSSVSGLTRRGLHSIWSH*STPGKR
Trigger: CCTTTTCCCTGGAGTGGACCAGTGAGACCAAATGCT...ATGCAGACCTCTTCTGGTTAGACCTGACACGGAGGAAGTAATTGGCTGGTCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR-3UTR TCA 90 bp CACCATGTGAAAGGAGAAGGACCTCTACACGACCACCAGCACAGCCTCCCGACATTAAAACAGAGATACTaGACTCCTCTGCACTTCTAT +
Preference number: 2 (lower is better)
Translates to: HHVKGEGPLHDHQHSLPTLKQRY*TPLHFY
Trigger: ATAGAAGTGCAGAGGAGTTCAGTATCTCTGTTTTAA...TGTCGGGAGGCTGTGCTGGTGGTCGTGTAGAGGTCCTTCTCCTTTCACATGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
3UTR-3UTR TCA 90 bp CTTATGGTGGCTCAGACTATACTGTCTGAGGGCTTCATCATGCTACCGGTTTCTCAACGACTGCTGCTATaGAATATCACAGGCCTCCGA +
Preference number: 2 (lower is better)
Translates to: LMVAQTILSEGFIMLPVSQRLLL*NITGLR
Trigger: TCGGAGGCCTGTGATATTTCATAGCAGCAGTCGTTG...AGAAACCGGTAGCATGATGAAGCCCTCAGACAGTATAGTCTGAGCCACCATAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR-3UTR GCA 90 bp CTTATGGTGGCTCAGACTATACTGTCTGAGGGCTTCATCATGCTACCGGTTTCTTTTTTCCAACATGGCTaGCAACCGAGACCCAGTGAC +
Preference number: 2 (lower is better)
Translates to: LMVAQTILSEGFIMLPVSFFQHG*QPRPSD
Trigger: GTCACTGGGTCTCGGTTGGCAGCCATGTTGGAAAAA...AGAAACCGGTAGCATGATGAAGCCCTCAGACAGTATAGTCTGAGCCACCATAAG
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR-3UTR GCA 90 bp GAAACTTCCATAGACCAGCTCTTCAAAGAGCTAAGCCAGGGCCTGATCAGACCGGTCACCAGCAACGACTaGTGCTATGAAATATCACAG +
Preference number: 2 (lower is better)
Translates to: ETSIDQLFKELSQGLIRPVTSND*CYEISQ
Trigger: CTGTGATATTTCATAGCAGCAGTCGTTGCTGGTGAC...CGGTCTGATCAGGCCCTGGCTTAGCTCTTTGAAGAGCTGGTCTATGGAAGTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000381318.8
3UTR-3UTR GCA 90 bp ACGCTATTAATGAAATGCCCCTGGAGAACACTTGCAGAACTTCCCGTAGTCCGGCGCACCTGGCCGGTTTaGATTATTTCTCTGAAGAAC +
Preference number: 2 (lower is better)
Translates to: TLLMKCPWRTLAELPVVRRTWPV*IISLKN
Trigger: GTTCTTCAGAGAAATAATGCAAACCGGCCAGGTGCG...CCGGACTACGGGAAGTTCTGCAAGTGTTCTCCAGGGGCATTTCATTAATAGCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR-3UTR GCA 90 bp TCATCAAACAACTGCAGGTCCAAGCGGACCACAATCTCTCCCGTGGGGACTTCGCAGTCCTTTCATTTATaGTTTCTGCTCGGAGAGTAT +
Preference number: 2 (lower is better)
Translates to: SSNNCRSKRTTISPVGTSQSFHL*FLLGEY
Trigger: ATACTCTCCGAGCAGAAAGCATAAATGAAAGGACTG...CGAAGTCCCCACGGGAGAGATTGTGGTCCGCTTGGACCTGCAGTTGTTTGATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381285.8
3UTR-3UTR CCA 90 bp GTTGACCAGCCAATTACTTCCTCCGTGTCAGGTCTAACCAGAAGAGGTCTGCATCCAGAACTTGCTACATaGCAGGAGCATCTCAAGGAT +
Preference number: 2 (lower is better)
Translates to: VDQPITSSVSGLTRRGLHPELAT*QEHLKD
Trigger: ATCCTTGAGATGCTCCTGCCATGTAGCAAGTTCTGG...ATGCAGACCTCTTCTGGTTAGACCTGACACGGAGGAAGTAATTGGCTGGTCAAC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR-3UTR CCA 90 bp GGGCACTTCTGGTGGCCAAGTACAGAAAGTCTGTGCCCCAGAAGCAGCCTGGACCTCCATACGGACAATTaGTTACATTACAAATTACAC +
Preference number: 2 (lower is better)
Translates to: GHFWWPSTESLCPRSSLDLHTDN*LHYKLH
Trigger: GTGTAATTTGTAATGTAACCAATTGTCCGTATGGAG...GTCCAGGCTGCTTCTGGGGCACAGACTTTCTGTACTTGGCCACCAGAAGTGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR-3UTR CCA 90 bp ACGCTATTAATGAAATGCCCCTGGAGAACACTTGCAGAACTTCCCGTAGTCCGGAACAGAGAGGCCCAATaGTTTGAGACTCCATGCATC +
Preference number: 2 (lower is better)
Translates to: TLLMKCPWRTLAELPVVRNREAQ*FETPCI
Trigger: GATGCATGGAGTCTCAAACCATTGGGCCTCTCTGTT...CCGGACTACGGGAAGTTCTGCAAGTGTTCTCCAGGGGCATTTCATTAATAGCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR-3UTR CCA 90 bp ACAGAATCCTCCTTAGGTGGCCTAAGGGGCACTTCTGGTGGCCAAGTACAGAAAGTGTGTCTTGGTGTCTaGGTTTTAATGCTCCCAAGA +
Preference number: 2 (lower is better)
Translates to: TESSLGGLRGTSGGQVQKVCLGV*VLMLPR
Trigger: TCTTGGGAGCATTAAAACCCAGACACCAAGACACAC...TTTCTGTACTTGGCCACCAGAAGTGCCCCTTAGGCCACCTAAGGAGGATTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR CAA 90 bp CTAAACTCACACCAAGGACTGGGCATTGTAGGCCAAGAAGTCTACTaGGGGACTGGTGGATGTAAGAAACAGGAGGGTTACATGAGTTCT +
Preference number: 2 (lower is better)
Translates to: LNSHQGLGIVGQEVY*GTGGCKKQEGYMSS
Trigger: AGAACTCATGTAACCCTCCTGTTTCTTACATCCACCAGTCCCCAAGTAGACTTCTTGGCCTACAATGCCCAGTCCTTGGTGTGAGTTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000381318.8
3UTR CAA 90 bp TCACAGCTGGGTCCGAGGGCCAGCCCGACTCCTCCATACGGACAATaGGTTACATTACAAATTACACCAGTAAATACAAGGACACTAATC +
Preference number: 2 (lower is better)
Translates to: SQLGPRASPTPPYGQ*VTLQITPVNTRTLI
Trigger: GATTAGTGTCCTTGTATTTACTGGTGTAATTTGTAATGTAACCAATTGTCCGTATGGAGGAGTCGGGCTGGCCCTCGGACCCAGCTGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR-3UTR TCA 90 bp ACTGAAGTGCAACTGAACGAGGAGGAGAGGTCCTCGCTCTCTGCACCATGTGAACACACAAACGGACCATaGGCTCCATTTCATATTAAT +
Preference number: 2 (lower is better)
Translates to: TEVQLNEEERSSLSAPCEHTNGP*APFHIN
Trigger: ATTAATATGAAATGGAGCTCATGGTCCGTTTGTGTG...TTCACATGGTGCAGAGAGCGAGGACCTCTCCTCCTCGTTCAGTTGCACTTCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
3UTR-3UTR TCA 90 bp TCATCAAACAACTGCAGGTCCAAGCGGACCACAATCTCTCCCGTGGGGACTTCGAACAGGAGGGTTACATaGGTTCTCCAAAAATATAGA +
Preference number: 2 (lower is better)
Translates to: SSNNCRSKRTTISPVGTSNRRVT*VLQKYR
Trigger: TCTATATTTTTGGAGAACTCATGTAACCCTCCTGTT...CGAAGTCCCCACGGGAGAGATTGTGGTCCGCTTGGACCTGCAGTTGTTTGATGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381285.8
3UTR-3UTR TCA 90 bp CGTAACTGGACCTTTGGAGCCCTGGTCTTTCTTGATGTCCGCCACACGGATCTCGATAATGACTTTCTGTaGCCATATTCTAAGCATGCT +
Preference number: 2 (lower is better)
Translates to: RNWTFGALVFLDVRHTDLDNDFL*PYSKHA
Trigger: AGCATGCTTAGAATATGGTCACAGAAAGTCATTATC...GAGATCCGTGTGGCGGACATCAAGAAAGACCAGGGCTCCAAAGGTCCAGTTACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381285.8
3UTR-3UTR TCA 90 bp TGTCCTACAACAATCAGGATTCAGCACATTCAAGCACAGAACAGGTCACCAGCACAACGACTGCTGCTATaGAATATCACAGGCCTCCGA +
Preference number: 2 (lower is better)
Translates to: CPTTIRIQHIQAQNRSPAQRLLL*NITGLR
Trigger: TCGGAGGCCTGTGATATTTCATAGCAGCAGTCGTTG...TGCTGGTGACCTGTTCTGTGCTTGAATGTGCTGAATCCTGATTGTTGTAGGACA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000381318.8
3UTR-3UTR TCA 90 bp CTTCTAGAACTTGAGGCTACTTACACAGAGGGATCTTTTCTCTCCTACCATCCCCTAGCAATCCTCATCTaGGCTCAGCCTTCCCAGAAA +
Preference number: 2 (lower is better)
Translates to: LLELEATYTEGSFLSYHPLAILI*AQPSQK
Trigger: TTTCTGGGAAGGCTGAGCTCAGATGAGGATTGCTAG...GGGATGGTAGGAGAGAAAAGATCCCTCTGTGTAAGTAGCCTCAAGTTCTAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR-3UTR GCA 90 bp CTTATGGTGGCTCAGACTATACTGTCTGAGGGCTTCATCATGCTACCGGTTTCTACCAGCAACGACTGCTaGTATGAAATATCACAGGCC +
Preference number: 2 (lower is better)
Translates to: LMVAQTILSEGFIMLPVSTSNDC*YEISQA
Trigger: GGCCTGTGATATTTCATAGCAGCAGTCGTTGCTGGT...AGAAACCGGTAGCATGATGAAGCCCTCAGACAGTATAGTCTGAGCCACCATAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR-3UTR GCA 90 bp CTTCTAGAACTTGAGGCTACTTACACAGAGGGATCTTTTCTCTCCTACCATCCCCACGCACTGAGCTGCTaGGTCCCACCAACAAAAATT +
Preference number: 2 (lower is better)
Translates to: LLELEATYTEGSFLSYHPHALSC*VPPTKI
Trigger: AATTTTTGTTGGTGGGACGCAGCAGCTCAGTGCGTG...GGGATGGTAGGAGAGAAAAGATCCCTCTGTGTAAGTAGCCTCAAGTTCTAGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR-3UTR GCA 90 bp CAGCCAGAGGGCATCGTTCTAAGGAAGGAGAGTCAGGGCCTGTTTGGGGTTGGTCATAGTGAGGATTATTaGTCAATGTATATGGAGATG +
Preference number: 2 (lower is better)
Translates to: QPEGIVLRKESQGLFGVGHSEDY*SMYMEM
Trigger: CATCTCCATATACATTGAGCAATAATCCTCACTATG...ACCAACCCCAAACAGGCCCTGACTCTCCTTCCTTAGAACGATGCCCTCTGGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR-3UTR GCA 90 bp GAAACTTCCATAGACCAGCTCTTCAAAGAGCTAAGCCAGGGCCTGATCAGACCGTTCATTTATGCTTTCTaGTCGGAGAGTATAGACGCG +
Preference number: 2 (lower is better)
Translates to: ETSIDQLFKELSQGLIRPFIYAF*SESIDA
Trigger: CGCGTCTATACTCTCCGAGCAGAAAGCATAAATGAA...CGGTCTGATCAGGCCCTGGCTTAGCTCTTTGAAGAGCTGGTCTATGGAAGTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381285.8
3UTR-3UTR CCA 90 bp AGCTGCTGCGTCCCACCAACAAAAATTCCCTTCCACCTAAAATTCCAGAAGTCAGAGATTTTTCCAACATaGCTGCCAACCGAGACCCAG +
Preference number: 2 (lower is better)
Translates to: SCCVPPTKIPFHLKFQKSEIFPT*LPTETQ
Trigger: CTGGGTCTCGGTTGGCAGCCATGTTGGAAAAATCTC...TGACTTCTGGAATTTTAGGTGGAAGGGAATTTTTGTTGGTGGGACGCAGCAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR-3UTR CCA 90 bp AGCTGCTGCGTCCCACCAACAAAAATTCCCTTCCACCTAAAATTCCAGAAGTCAGATGCCGGGATGCAGTaGCCTAGAGAACTCCTATAT +
Preference number: 2 (lower is better)
Translates to: SCCVPPTKIPFHLKFQKSDAGMQ*PRELLY
Trigger: ATATAGGAGTTCTCTAGGCCACTGCATCCCGGCATC...TGACTTCTGGAATTTTAGGTGGAAGGGAATTTTTGTTGGTGGGACGCAGCAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR-3UTR CCA 90 bp CTTCTAGAACTTGAGGCTACTTACACAGAGGGATCTTTTCTCTCCTACCATCCCAGAGGGACCAGGATGTaGACTCTGCCTTCTAGAGAA +
Preference number: 2 (lower is better)
Translates to: LLELEATYTEGSFLSYHPRGTRM*TLPSRE
Trigger: TTCTCTAGAAGGCAGAGTCCACATCCTGGTCCCTCT...GGGATGGTAGGAGAGAAAAGATCCCTCTGTGTAAGTAGCCTCAAGTTCTAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR-3UTR CCA 90 bp GGTTCAAGATACACAGGAAGAGCAATTTGTACTGATGTTGCTACTGGTTTAAAGCTGCTTGACGCCCTGTaGCCCATCCTGAACTGGGAG +
Preference number: 2 (lower is better)
Translates to: GSRYTGRAICTDVATGLKLLDAL*PILNWE
Trigger: CTCCCAGTTCAGGATGGGCCACAGGGCGTCAAGCAG...CTTTAAACCAGTAGCAACATCAGTACAAATTGCTCTTCCTGTGTATCTTGAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR-3UTR TCA 90 bp ACTGAAGTGCAACTGAACGAGGAGGAGAGGTCCTCGCTCTCTGCACCATGTGAAAGTGGTGTTGTCTACTaGTTTTATGCTATGCAAACA +
Preference number: 2 (lower is better)
Translates to: TEVQLNEEERSSLSAPCESGVVY*FYAMQT
Trigger: TGTTTGCATAGCATAAAATCAGTAGACAACACCACT...TTCACATGGTGCAGAGAGCGAGGACCTCTCCTCCTCGTTCAGTTGCACTTCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
3UTR-3UTR TCA 90 bp GTTTCTAAACTCACACCAAGGACTGGGCATTGTAGGCCAAGAAGTCTACTTGGGCCATATCCCTGTGACTaGATACCAAATGGTGGTTTC +
Preference number: 2 (lower is better)
Translates to: VSKLTPRTGHCRPRSLLGPYPCD*IPNGGF
Trigger: GAAACCACCATTTGGTATTCAGTCACAGGGATATGG...CCCAAGTAGACTTCTTGGCCTACAATGCCCAGTCCTTGGTGTGAGTTTAGAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000381318.8
3UTR-3UTR TCA 90 bp CTTCTAGAACTTGAGGCTACTTACACAGAGGGATCTTTTCTCTCCTACCATCCCAAGAGATCGGAATGGTaGCCCACACTACCCCATTTA +
Preference number: 2 (lower is better)
Translates to: LLELEATYTEGSFLSYHPKRSEW*PTLPHL
Trigger: TAAATGGGGTAGTGTGGGTCACCATTCCGATCTCTT...GGGATGGTAGGAGAGAAAAGATCCCTCTGTGTAAGTAGCCTCAAGTTCTAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR-3UTR GCA 90 bp GTTCAGCCTCCATGGACTTTTGCTTCTGGAGTTGTTGCTTATTGTGTATTTCTCCGTTCTAGCTCCCGCTaGTTTTCCAGTTGCTTCTCC +
Preference number: 2 (lower is better)
Translates to: VQPPWTFASGVVAYCVFLRSSSR*FSSCFS
Trigger: GGAGAAGCAACTGGAAAAGCAGCGGGAGCTAGAACG...GAGAAATACACAATAAGCAACAACTCCAGAAGCAAAAGTCCATGGAGGCTGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379960.9
3UTR-3UTR GCA 90 bp AACAGGGCTTCAGCTACAGCATATCTAACACACAAACGGACCATGAGCTCCATTGATACTGAACTCCTCTaGACTTCTATGGTAAGGGGG +
Preference number: 2 (lower is better)
Translates to: NRASATAYLTHKRTMSSIDTELL*TSMVRG
Trigger: CCCCCTTACCATAGAAGTGCAGAGGAGTTCAGTATC...AATGGAGCTCATGGTCCGTTTGTGTGTTAGATATGCTGTAGCTGAAGCCCTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
3UTR-3UTR GCA 90 bp GGTTCAAGATACACAGGAAGAGCAATTTGTACTGATGTTGCTACTGGTTTAAAGGGGATGTGCGGGGCTTaGATCCTCCTAGGGTCTTTC +
Preference number: 2 (lower is better)
Translates to: GSRYTGRAICTDVATGLKGMCGA*ILLGSF
Trigger: GAAAGACCCTAGGAGGATGCAAGCCCCGCACATCCC...CTTTAAACCAGTAGCAACATCAGTACAAATTGCTCTTCCTGTGTATCTTGAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR-3UTR GCA 90 bp CTTCTAGAACTTGAGGCTACTTACACAGAGGGATCTTTTCTCTCCTACCATCCCTGCCTTCTAGAGAACTaGTCTGTGAAGAAGGCTCAG +
Preference number: 2 (lower is better)
Translates to: LLELEATYTEGSFLSYHPCLLEN*SVKKAQ
Trigger: CTGAGCCTTCTTCACAGAGCAGTTCTCTAGAAGGCA...GGGATGGTAGGAGAGAAAAGATCCCTCTGTGTAAGTAGCCTCAAGTTCTAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR-3UTR GCA 90 bp GTTGACCAGCCAATTACTTCCTCCGTGTCAGGTCTAACCAGAAGAGGTCTGCATCCTCAGTCTTTCTGCTaGTTTACGATATCACCTCAT +
Preference number: 2 (lower is better)
Translates to: VDQPITSSVSGLTRRGLHPQSFC*FTISPH
Trigger: ATGAGGTGATATCGTAAAGCAGCAGAAAGACTGAGG...ATGCAGACCTCTTCTGGTTAGACCTGACACGGAGGAAGTAATTGGCTGGTCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR-3UTR GCA 90 bp GGTTCAAGATACACAGGAAGAGCAATTTGTACTGATGTTGCTACTGGTTTAAAGTTACCCAGGCTGGAGTaGAGTGGCGTGATCTCGGCT +
Preference number: 2 (lower is better)
Translates to: GSRYTGRAICTDVATGLKLPRLE*SGVISA
Trigger: AGCCGAGATCACGCCACTGCACTCCAGCCTGGGTAA...CTTTAAACCAGTAGCAACATCAGTACAAATTGCTCTTCCTGTGTATCTTGAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR-3UTR CCA 90 bp CTTCTAGAACTTGAGGCTACTTACACAGAGGGATCTTTTCTCTCCTACCATCCCGCCAAGAAGTCTACTTaGGGACTGGTGGATGTAAGA +
Preference number: 2 (lower is better)
Translates to: LLELEATYTEGSFLSYHPAKKST*GLVDVR
Trigger: TCTTACATCCACCAGTCCCCAAGTAGACTTCTTGGC...GGGATGGTAGGAGAGAAAAGATCCCTCTGTGTAAGTAGCCTCAAGTTCTAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR-3UTR CCA 90 bp GAAACTTCCATAGACCAGCTCTTCAAAGAGCTAAGCCAGGGCCTGATCAGACCGTCAAACCAAACAGCTTaGCACATAGTCATAAAGTCC +
Preference number: 2 (lower is better)
Translates to: ETSIDQLFKELSQGLIRPSNQTA*HIVIKS
Trigger: GGACTTTATGACTATGTGCCAAGCTGTTTGGTTTGA...CGGTCTGATCAGGCCCTGGCTTAGCTCTTTGAAGAGCTGGTCTATGGAAGTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR-3UTR TCA 90 bp GTTGACCAGCCAATTACTTCCTCCGTGTCAGGTCTAACCAGAAGAGGTCTGCATCATACGCTACCTACATaGACAATGATGTCCAACATT +
Preference number: 2 (lower is better)
Translates to: VDQPITSSVSGLTRRGLHHTLPT*TMMSNI
Trigger: AATGTTGGACATCATTGTTCATGTAGGTAGCGTATG...ATGCAGACCTCTTCTGGTTAGACCTGACACGGAGGAAGTAATTGGCTGGTCAAC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR-3UTR TCA 90 bp ACAGAATCCTCCTTAGGTGGCCTAAGGGGCACTTCTGGTGGCCAAGTACAGAAATCAATCAAATCCAGGTaGGATGAGTTTGCAATTTCT +
Preference number: 2 (lower is better)
Translates to: TESSLGGLRGTSGGQVQKSIKSR*DEFAIS
Trigger: AGAAATTGCAAACTCATCTCACCTGGATTTGATTGA...TTTCTGTACTTGGCCACCAGAAGTGCCCCTTAGGCCACCTAAGGAGGATTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR-3UTR GCA 90 bp GAGAGAGGGCTGGGCTGCCCATGCATCCCAGTTATCCGTTTCTGGTTTCTCATTTGCTTCTGGAGTTGTTaGTTATTGTGTATTTCTCTT +
Preference number: 2 (lower is better)
Translates to: ERGLGCPCIPVIRFWFLICFWSC*LLCISL
Trigger: AAGAGAAATACACAATAAGCAACAACTCCAGAAGCA...AATGAGAAACCAGAAACGGATAACTGGGATGCATGGGCAGCCCAGCCCTCTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379960.9
3UTR-3UTR GCA 90 bp CTTATGGTGGCTCAGACTATACTGTCTGAGGGCTTCATCATGCTACCGGTTTCTTGGTTTGAGACTCCATaGATCACCCATGTTTCTCAA +
Preference number: 2 (lower is better)
Translates to: LMVAQTILSEGFIMLPVSWFETP*ITHVSQ
Trigger: TTGAGAAACATGGGTGATGCATGGAGTCTCAAACCA...AGAAACCGGTAGCATGATGAAGCCCTCAGACAGTATAGTCTGAGCCACCATAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR-3UTR GCA 90 bp ACGCTATTAATGAAATGCCCCTGGAGAACACTTGCAGAACTTCCCGTAGTCCGGTTGATCCTGATGAAATaGAGACATATCCTGGATCTG +
Preference number: 2 (lower is better)
Translates to: TLLMKCPWRTLAELPVVRLILMK*RHILDL
Trigger: CAGATCCAGGATATGTCTGCATTTCATCAGGATCAA...CCGGACTACGGGAAGTTCTGCAAGTGTTCTCCAGGGGCATTTCATTAATAGCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR-3UTR GCA 90 bp ACAGAATCCTCCTTAGGTGGCCTAAGGGGCACTTCTGGTGGCCAAGTACAGAAAACGCATTCTTACCACTaGCTAAAAAGAAACCTTAGT +
Preference number: 2 (lower is better)
Translates to: TESSLGGLRGTSGGQVQKTHSYH*LKRNLS
Trigger: ACTAAGGTTTCTTTTTAGGCAGTGGTAAGAATGCGT...TTTCTGTACTTGGCCACCAGAAGTGCCCCTTAGGCCACCTAAGGAGGATTCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR-3UTR CCA 90 bp GGTTCAAGATACACAGGAAGAGCAATTTGTACTGATGTTGCTACTGGTTTAAAGCCCCTGGGGTCTCCATaGAAACATGGGCATCCAGAA +
Preference number: 2 (lower is better)
Translates to: GSRYTGRAICTDVATGLKPLGSP*KHGHPE
Trigger: TTCTGGATGCCCATGTTTCCATGGAGACCCCAGGGG...CTTTAAACCAGTAGCAACATCAGTACAAATTGCTCTTCCTGTGTATCTTGAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR-3UTR TCA 90 bp ACGCTATTAATGAAATGCCCCTGGAGAACACTTGCAGAACTTCCCGTAGTCCGGTCTAACATGTTCAGTTaGAAGTTTCTAACTACAGGG +
Preference number: 2 (lower is better)
Translates to: TLLMKCPWRTLAELPVVRSNMFS*KFLTTG
Trigger: CCCTGTAGTTAGAAACTTTCAACTGAACATGTTAGA...CCGGACTACGGGAAGTTCTGCAAGTGTTCTCCAGGGGCATTTCATTAATAGCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR-3UTR GCA 90 bp CAACCAGATAAATCTGAGACCGAACAAAAACACAGAGTGCTTTCTCATGTGGCTGATACTGAACTCCTCTaGACTTCTATGGTAAGGGGG +
Preference number: 2 (lower is better)
Translates to: QPDKSETEQKHRVLSHVADTELL*TSMVRG
Trigger: CCCCCTTACCATAGAAGTGCAGAGGAGTTCAGTATC...AGCCACATGAGAAAGCACTCTGTGTTTTTGTTCGGTCTCAGATTTATCTGGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
3UTR-3UTR CCA 90 bp ACAGAATCCTCCTTAGGTGGCCTAAGGGGCACTTCTGGTGGCCAAGTACAGAAAGCTTATACAAGGTACTaGCCTACTCTAAAATATACT +
Preference number: 2 (lower is better)
Translates to: TESSLGGLRGTSGGQVQKAYTRY*PTLKYT
Trigger: AGTATATTTTAGAGTAGGCCAGTACCTTGTATAAGC...TTTCTGTACTTGGCCACCAGAAGTGCCCCTTAGGCCACCTAAGGAGGATTCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR-3UTR TCA 90 bp TCCACCATGACTATGTCTCCTGGCTGGATAGTGATTTCATCATGGCTTCTGGATTGGTCAATCGACATCTaGTATCTTGAAGTTTCCCTT +
Preference number: 2 (lower is better)
Translates to: STMTMSPGWIVISSWLLDWSIDI*YLEVSL
Trigger: AAGGGAAACTTCAAGATATCAGATGTCGATTGACCA...ATCCAGAAGCCATGATGAAATCACTATCCAGCCAGGAGACATAGTCATGGTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379960.9
3UTR-3UTR TCA 90 bp TTCTGTTTCAGTCGTTCAGCCTCCATGGACTTTTGCTTCTGGAGTTGTTGCTTACTTCCAAGCATTTGCTaGGATTCCTGTAATTGTTGC +
Preference number: 2 (lower is better)
Translates to: FCFSRSASMDFCFWSCCLLPSIC*DSCNCC
Trigger: GCAACAATTACAGGAATCTCAGCAAATGCTTGGAAG...TAAGCAACAACTCCAGAAGCAAAAGTCCATGGAGGCTGAACGACTGAAACAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379960.9
3UTR-3UTR TCA 90 bp TATGGGATTTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAGCACAGCTTTGTTTCATaGAACAGGAAATTGTTTCGG +
Preference number: 2 (lower is better)
Translates to: YGISATLEAIMRPVVRTKHSFVS*NRKLFR
Trigger: CCGAAACAATTTCCTGTTTCATGAAACAAAGCTGTG...CTTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAAATCCCATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
3UTR-3UTR TCA 90 bp GGTTCAAGATACACAGGAAGAGCAATTTGTACTGATGTTGCTACTGGTTTAAAGTCCTCTCATCCTTCCTaGCACAAGTACCCTCTCAGA +
Preference number: 2 (lower is better)
Translates to: GSRYTGRAICTDVATGLKSSHPS*HKYPLR
Trigger: TCTGAGAGGGTACTTGTGTCAGGAAGGATGAGAGGA...CTTTAAACCAGTAGCAACATCAGTACAAATTGCTCTTCCTGTGTATCTTGAACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR-3UTR TCA 90 bp AGAAACAGACATTATGGAAACCGAAAATCAAAAGGAAGTATGCAACAACCTGAATTCTTCCTTTTCCCCTaGCTGGCGGCCTGCATCTCT +
Preference number: 2 (lower is better)
Translates to: RNRHYGNRKSKGSMQQPEFFLFP*LAACIS
Trigger: AGAGATGCAGGCCGCCAGTCAGGGGAAAAGGAAGAA...TTCAGGTTGTTGCATACTTCCTTTTGATTTTCGGTTTCCATAATGTCTGTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000456489.1
3UTR-3UTR GCA 90 bp TGTTACCCGTTGCATAGGCTTCAGTATAAAACTAGAGAGTGGCATCCCTTTACAGTCACCAGCAACGACTaGTGCTATGAAATATCACAG +
Preference number: 2 (lower is better)
Translates to: CYPLHRLQYKTREWHPFTVTSND*CYEISQ
Trigger: CTGTGATATTTCATAGCAGCAGTCGTTGCTGGTGAC...TGTAAAGGGATGCCACTCTCTAGTTTTATACTGAAGCCTATGCAACGGGTAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381285.8
3UTR-3UTR GCA 90 bp GGTTCAAGATACACAGGAAGAGCAATTTGTACTGATGTTGCTACTGGTTTAAAGTCTACACAAGAGCAATaGCTAGCAGCTGCGGTAGGT +
Preference number: 2 (lower is better)
Translates to: GSRYTGRAICTDVATGLKSTQEQ*LAAAVG
Trigger: ACCTACCGCAGCTGCTAGGCATTGCTCTTGTGTAGA...CTTTAAACCAGTAGCAACATCAGTACAAATTGCTCTTCCTGTGTATCTTGAACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR-3UTR GCA 90 bp AGCCAAAAGAGATTTTTCCAACATGGCTGCCAACCGAGACCCAGTGACCCAACATATCTTGTTACCCGTTaGATAGGCTTCAGTATAAAA +
Preference number: 2 (lower is better)
Translates to: SQKRFFQHGCQPRPSDPTYLVTR*IGFSIK
Trigger: TTTTATACTGAAGCCTATGCAACGGGTAACAAGATA...TGTTGGGTCACTGGGTCTCGGTTGGCAGCCATGTTGGAAAAATCTCTTTTGGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381285.8
3UTR-3UTR CCA 90 bp GGAATCAGAACTGAATCCACGCAACAATACACCAGTGTGTTTTCATTGACATATTCATCTGGTGAGAACTaGTCCCTCTCGAACACAGTG +
Preference number: 2 (lower is better)
Translates to: GIRTESTQQYTSVFSLTYSSGEN*SLSNTV
Trigger: CACTGTGTTCGAGAGGGACCAGTTCTCACCAGATGA...ATATGTCAATGAAAACACACTGGTGTATTGTTGCGTGGATTCAGTTCTGATTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381285.8
3UTR-3UTR TCA 90 bp CAACCAGATAAATCTGAGACCGAACAAAAACACAGAGTGCTTTCTCATGTGGCTTCAACAAGGTACAGCTaGTACACACAAACAAGCACA +
Preference number: 2 (lower is better)
Translates to: QPDKSETEQKHRVLSHVASTRYS*YTQTST
Trigger: TGTGCTTGTTTGTGTGTATCAGCTGTACCTTGTTGA...AGCCACATGAGAAAGCACTCTGTGTTTTTGTTCGGTCTCAGATTTATCTGGTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
3UTR-3UTR TCA 90 bp GGAATCAGAACTGAATCCACGCAACAATACACCAGTGTGTTTTCATTGACATATGCTGGGAATCAGAACTaGATCCACGCAACAATACAC +
Preference number: 2 (lower is better)
Translates to: GIRTESTQQYTSVFSLTYAGNQN*IHATIH
Trigger: GTGTATTGTTGCGTGGATTCAGTTCTGATTCCCAGC...ATATGTCAATGAAAACACACTGGTGTATTGTTGCGTGGATTCAGTTCTGATTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000381318.8
3UTR-3UTR TCA 90 bp TGTCCTACAACAATCAGGATTCAGCACATTCAAGCACAGAACAGGTCACCAGCAGATAATGACTTTCTGTaGCCATATTCTAAGCATGCT +
Preference number: 2 (lower is better)
Translates to: CPTTIRIQHIQAQNRSPADNDFL*PYSKHA
Trigger: AGCATGCTTAGAATATGGTCACAGAAAGTCATTATC...TGCTGGTGACCTGTTCTGTGCTTGAATGTGCTGAATCCTGATTGTTGTAGGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000381318.8
3UTR-3UTR GCA 90 bp GGAATCAGAACTGAATCCACGCAACAATACACCAGTGTGTTTTCATTGACATATAAGTCTGAACACCATTaGTGGCTTGGGTCCATGTCT +
Preference number: 2 (lower is better)
Translates to: GIRTESTQQYTSVFSLTYKSEHH*WLGSMS
Trigger: AGACATGGACCCAAGCCAGCAATGGTGTTCAGACTT...ATATGTCAATGAAAACACACTGGTGTATTGTTGCGTGGATTCAGTTCTGATTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381285.8
3UTR CAA 90 bp TTCGGCAATTCTCAACTCTCTAGATTTGTTTGTGCTCTCAATTTCTaGCCTTTGGGTGGTCAATCGACATCTGATATCTTGAAGTTTCCC +
Preference number: 2 (lower is better)
Translates to: FGNSQLSRFVCALNF*PLGGQSTSDILKFP
Trigger: GGGAAACTTCAAGATATCAGATGTCGATTGACCACCCAAAGGCAAGAAATTGAGAGCACAAACAAATCTAGAGAGTTGAGAATTGCCGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379960.9
3UTR CAA 90 bp ACATTACAAATTACACCAGTAAATACAAGGACACTAATCCAGAACTaGCTACATGGCAGGAGCATCTCAAGGATGCTCAACAGAGTCACT +
Preference number: 2 (lower is better)
Translates to: TLQITPVNTRTLIQN*LHGRSISRMLNRVT
Trigger: AGTGACTCTGTTGAGCATCCTTGAGATGCTCCTGCCATGTAGCAAGTTCTGGATTAGTGTCCTTGTATTTACTGGTGTAATTTGTAATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR-3UTR TCA 90 bp TTTTTGAAAAATCTCTGTGACCAGCTGCAGGTCATTCACATAGTTCTCCTCGGTCACAGCTTTGTTTCATaGAACAGGAAATTGTTTCGG +
Preference number: 2 (lower is better)
Translates to: FLKNLCDQLQVIHIVLLGHSFVS*NRKLFR
Trigger: CCGAAACAATTTCCTGTTTCATGAAACAAAGCTGTG...ACCGAGGAGAACTATGTGAATGACCTGCAGCTGGTCACAGAGATTTTTCAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000381285.8
3UTR-3UTR TCA 90 bp GGAATCAGAACTGAATCCACGCAACAATACACCAGTGTGTTTTCATTGACATATAAATTGCTTGAAGTATaGCCGGGCTCTCATGGGAAA +
Preference number: 2 (lower is better)
Translates to: GIRTESTQQYTSVFSLTYKLLEV*PGSHGK
Trigger: TTTCCCATGAGAGCCCGGTCATACTTCAAGCAATTT...ATATGTCAATGAAAACACACTGGTGTATTGTTGCGTGGATTCAGTTCTGATTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR-3UTR TCA 90 bp GGAATCAGAACTGAATCCACGCAACAATACACCAGTGTGTTTTCATTGACATATAGTTCCAGAGCCCTCTaGATCTTTAAGCCTCACATA +
Preference number: 2 (lower is better)
Translates to: GIRTESTQQYTSVFSLTYSSRAL*IFKPHI
Trigger: TATGTGAGGCTTAAAGATTCAGAGGGCTCTGGAACT...ATATGTCAATGAAAACACACTGGTGTATTGTTGCGTGGATTCAGTTCTGATTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381285.8
3UTR-3UTR CCA 90 bp TTTAGACTAGCAGGACTCTCTGAAGAACCAGAATCCATGCTTGTAGACTTCCTTATAGTGATTTCATCATaGCTTCTGGATTCAAAGGGG +
Preference number: 2 (lower is better)
Translates to: FRLAGLSEEPESMLVDFLIVISS*LLDSKG
Trigger: CCCCTTTGAATCCAGAAGCCATGATGAAATCACTAT...AAGGAAGTCTACAAGCATGGATTCTGGTTCTTCAGAGAGTCCTGCTAGTCTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379960.9
3UTR-3UTR CCA 90 bp AGACTGTGGATATCGTTGATCGTAACGACCTCAGTGGTGTTGTCTACTGATTTTCACCTTCGCTTTAATTaGGCTCATTCTATACGTCTT +
Preference number: 2 (lower is better)
Translates to: RLWISLIVTTSVVLSTDFHLRFN*AHSIRL
Trigger: AAGACGTATAGAATGAGCCCAATTAAAGCGAAGGTG...AAAATCAGTAGACAACACCACTGAGGTCGTTACGATCAACGATATCCACAGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
3UTR-3UTR CCA 90 bp GATAAATCTGAGACCGAACAAAAACACAGAGTGCTTTCTCATGTGGCTACAAGGCACCTTCGCTTTAATTaGGCTCATTCTATACGTCTT +
Preference number: 2 (lower is better)
Translates to: DKSETEQKHRVLSHVATRHLRFN*AHSIRL
Trigger: AAGACGTATAGAATGAGCCCAATTAAAGCGAAGGTG...CCTTGTAGCCACATGAGAAAGCACTCTGTGTTTTTGTTCGGTCTCAGATTTATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
3UTR-3UTR TCA 90 bp TTTATTGAGAGCTTCCAACTAGTGTTTAAAAGACAAACAGGGCTTCAGCTACAGTCAACAAGGTACAGCTaGTACACACAAACAAGCACA +
Preference number: 2 (lower is better)
Translates to: FIESFQLVFKRQTGLQLQSTRYS*YTQTST
Trigger: TGTGCTTGTTTGTGTGTATCAGCTGTACCTTGTTGA...CTGTAGCTGAAGCCCTGTTTGTCTTTTAAACACTAGTTGGAAGCTCTCAATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
3UTR-3UTR GCA 90 bp AGACTGTGGATATCGTTGATCGTAACGACCTCAGTGGTGTTGTCTACTGATTTTAACAAAAACACAGAGTaGTTTCTCATGTGGCTACAA +
Preference number: 2 (lower is better)
Translates to: RLWISLIVTTSVVLSTDFNKNTE*FLMWLQ
Trigger: TTGTAGCCACATGAGAAAGCACTCTGTGTTTTTGTT...AAAATCAGTAGACAACACCACTGAGGTCGTTACGATCAACGATATCCACAGTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
3UTR-3UTR TCA 90 bp TTTATTGAGAGCTTCCAACTAGTGTTTAAAAGACAAACAGGGCTTCAGCTACAGCACACAAACGGACCATaGGCTCCATTTCATATTAAT +
Preference number: 2 (lower is better)
Translates to: FIESFQLVFKRQTGLQLQHTNGP*APFHIN
Trigger: ATTAATATGAAATGGAGCTCATGGTCCGTTTGTGTG...CTGTAGCTGAAGCCCTGTTTGTCTTTTAAACACTAGTTGGAAGCTCTCAATAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
3UTR-3UTR TCA 90 bp GGTTCAAGATACACAGGAAGAGCAATTTGTACTGATGTTGCTACTGGTTTAAAGCAAATCCAGGTGAGATaGGTTTGCAATTTCTGTCAA +
Preference number: 2 (lower is better)
Translates to: GSRYTGRAICTDVATGLKQIQVR*VCNFCQ
Trigger: TTGACAGAAATTGCAAACTCATCTCACCTGGATTTG...CTTTAAACCAGTAGCAACATCAGTACAAATTGCTCTTCCTGTGTATCTTGAACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR-3UTR GCA 90 bp GGTTCAAGATACACAGGAAGAGCAATTTGTACTGATGTTGCTACTGGTTTAAAGACCAATAACTCCTTCTaGGATCTACACAAGAGCAAT +
Preference number: 2 (lower is better)
Translates to: GSRYTGRAICTDVATGLKTNNSF*DLHKSN
Trigger: ATTGCTCTTGTGTAGATCGCAGAAGGAGTTATTGGT...CTTTAAACCAGTAGCAACATCAGTACAAATTGCTCTTCCTGTGTATCTTGAACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR-3UTR CCA 90 bp TTTATTGAGAGCTTCCAACTAGTGTTTAAAAGACAAACAGGGCTTCAGCTACAGCACCTTCGCTTTAATTaGGCTCATTCTATACGTCTT +
Preference number: 2 (lower is better)
Translates to: FIESFQLVFKRQTGLQLQHLRFN*AHSIRL
Trigger: AAGACGTATAGAATGAGCCCAATTAAAGCGAAGGTG...CTGTAGCTGAAGCCCTGTTTGTCTTTTAAACACTAGTTGGAAGCTCTCAATAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
3UTR CAA 90 bp CTCAAGGATGCTCAACAGAGTCACTTGAGGAAAAAGAGTCACATATaGCTTTCTCATGCTACATTAATTCCAATAATAGGACACTATGAG +
Preference number: 2 (lower is better)
Translates to: LKDAQQSHLRKKSHI*LSHATLIPIIGHYE
Trigger: CTCATAGTGTCCTATTATTGGAATTAATGTAGCATGAGAAAGCAATATGTGACTCTTTTTCCTCAAGTGACTCTGTTGAGCATCCTTGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR-3UTR TCA 90 bp TTTATTGAGAGCTTCCAACTAGTGTTTAAAAGACAAACAGGGCTTCAGCTACAGAGTGGTGTTGTCTACTaGTTTTATGCTATGCAAACA +
Preference number: 2 (lower is better)
Translates to: FIESFQLVFKRQTGLQLQSGVVY*FYAMQT
Trigger: TGTTTGCATAGCATAAAATCAGTAGACAACACCACT...CTGTAGCTGAAGCCCTGTTTGTCTTTTAAACACTAGTTGGAAGCTCTCAATAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
3UTR-3UTR TCA 90 bp TGCAATATGATTAGAGCATCGTACAAGGTAATAGCTTTGCCATGGAAAGAACTATTAAAACAGAGATACTaGACTCCTCTGCACTTCTAT +
Preference number: 2 (lower is better)
Translates to: CNMIRASYKVIALPWKELLKQRY*TPLHFY
Trigger: ATAGAAGTGCAGAGGAGTTCAGTATCTCTGTTTTAA...TAGTTCTTTCCATGGCAAAGCTATTACCTTGTACGATGCTCTAATCATATTGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
3UTR-3UTR CAA 90 bp AGCCTCTCCGAAGCAGGTTCCTCCCAGACACCCGCAGACCAGATCGTGTGGCCCCCTGGCGCGCTAGGCTaGAACCCTAGGCTCGCCGCG +
Preference number: 3 (lower is better)
Translates to: SLSEAGSSQTPADQIVWPPGALG*NPRLAA
Trigger: CGCGGCGAGCCTAGGGTTCAAGCCTAGCGCGCCAGG...GGGCCACACGATCTGGTCTGCGGGTGTCTGGGAGGAACCTGCTTCGGAGAGGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR-3UTR CAA 90 bp GCCCGTCCAGCTGCCGCCCAGCTTCTAGGAGGGTGGCCTGGACCAGGATGGGGACGGGATGTGCGGGGCTaGCATCCTCCTAGGGTCTTT +
Preference number: 3 (lower is better)
Translates to: ARPAAAQLLGGWPGPGWGRDVRG*HPPRVF
Trigger: AAAGACCCTAGGAGGATGCAAGCCCCGCACATCCCG...TCCCCATCCTGGTCCAGGCCACCCTCCTAGAAGCTGGGCGGCAGCTGGACGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR TCA 72 bp CCAGACAGCATGTGTGGCCGTGGGCTGGGACCCTGCTaGGCACACCCTGAGCCCGCTGCCTACGGCTCATCA +
Preference number: 3 (lower is better)
Translates to: PDSMCGRGLGPC*AHPEPAAYGSS
Trigger: TGATGAGCCGTAGGCAGCGGGCTCAGGGTGTGCTCAGCAGGGTCCCAGCCCACGGCCACACATGCTGTCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381285.8
3UTR GCA 72 bp GCTTGCTTGAATGCCACCAAGGCAGGCCCGTCCAGCTaGCGCCCAGCTTCTAGGAGGGTGGCCTGGACCAGG +
Preference number: 3 (lower is better)
Translates to: ACLNATKAGPSS*RPASRRVAWTR
Trigger: CCTGGTCCAGGCCACCCTCCTAGAAGCTGGGCGGCAGCTGGACGGGCCTGCCTTGGTGGCATTCAAGCAAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR CCA 72 bp CAGTGTGGTCAGGGCCGGCCTCCTGGGTGTGCTGCCTaGCAGCCACAAGGGGCTATGCACTCAGAAGGGACC +
Preference number: 3 (lower is better)
Translates to: QCGQGRPPGCAA*QPQGAMHSEGT
Trigger: GGTCCCTTCTGAGTGCATAGCCCCTTGTGGCTGCCAGGCAGCACACCCAGGAGGCCGGCCCTGACCACACTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR TCA 72 bp AAGGCTCACAGCTGCTTGACGCCCTGTGGCCCATCCTaGACTGGGAGCCCAGAGCTCCTGCCACCACCGGCA +
Preference number: 3 (lower is better)
Translates to: KAHSCLTPCGPS*TGSPELLPPPA
Trigger: TGCCGGTGGTGGCAGGAGCTCTGGGCTCCCAGTTCAGGATGGGCCACAGGGCGTCAAGCAGCTGTGAGCCTT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR TCA 72 bp GTGTGGCCGTGGGCTGGGACCCTGCTGAGCACACCCTaGGCCCGCTGCCTACGGCTCATCAAACAACTGCAG +
Preference number: 3 (lower is better)
Translates to: VWPWAGTLLSTP*ARCLRLIKQLQ
Trigger: CTGCAGTTGTTTGATGAGCCGTAGGCAGCGGGCTCAGGGTGTGCTCAGCAGGGTCCCAGCCCACGGCCACAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381285.8
3UTR GCA 72 bp CAGAGAACAGTGTGGTCAGGGCCGGCCTCCTGGGTGTaGTGCCTGGCAGCCACAAGGGGCTATGCACTCAGA +
Preference number: 3 (lower is better)
Translates to: QRTVWSGPASWV*CLAATRGYALR
Trigger: TCTGAGTGCATAGCCCCTTGTGGCTGCCAGGCAGCACACCCAGGAGGCCGGCCCTGACCACACTGTTCTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR CCA 72 bp GCCGTGGCTGGAGTAAAGGCGGACCTCTGCCTTAACTaGCCGGCACTTGGAACGGTGAGAGAGGGCTGGGCT +
Preference number: 3 (lower is better)
Translates to: AVAGVKADLCLN*PALGTVREGWA
Trigger: AGCCCAGCCCTCTCTCACCGTTCCAAGTGCCGGCCAGTTAAGGCAGAGGTCCGCCTTTACTCCAGCCACGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379960.9
ENST00000419241.1
3UTR CCA 72 bp AACCAGCAGAGAACAGTGTGGTCAGGGCCGGCCTCCTaGGTGTGCTGCCTGGCAGCCACAAGGGGCTATGCA +
Preference number: 3 (lower is better)
Translates to: NQQRTVWSGPAS*VCCLAATRGYA
Trigger: TGCATAGCCCCTTGTGGCTGCCAGGCAGCACACCCAGGAGGCCGGCCCTGACCACACTGTTCTCTGCTGGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR-3UTR CAA 90 bp AGCCTCTCCGAAGCAGGTTCCTCCCAGACACCCGCAGACCAGATCGTGTGGCCCACCCCCTCTCCAGCCTaGGGGTACAGCTGTGAACTA +
Preference number: 3 (lower is better)
Translates to: SLSEAGSSQTPADQIVWPTPSPA*GYSCEL
Trigger: TAGTTCACAGCTGTACCCCAAGGCTGGAGAGGGGGT...GGGCCACACGATCTGGTCTGCGGGTGTCTGGGAGGAACCTGCTTCGGAGAGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR GCA 72 bp GAGCCAGTGGCCGTGGCTGGAGTAAAGGCGGACCTCTaGCTTAACTGGCCGGCACTTGGAACGGTGAGAGAG +
Preference number: 3 (lower is better)
Translates to: EPVAVAGVKADL*LNWPALGTVRE
Trigger: CTCTCTCACCGTTCCAAGTGCCGGCCAGTTAAGGCAGAGGTCCGCCTTTACTCCAGCCACGGCCACTGGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379960.9
ENST00000419241.1
3UTR GCA 72 bp CGCCGCGAGCTTCCTTCCCACCCAGCCTTCGGTCTCTaGCAGGCCCACATTCCTAGCTCTGAGTCCGTTTTC +
Preference number: 3 (lower is better)
Translates to: RRELPSHPAFGL*QAHIPSSESVF
Trigger: GAAAACGGACTCAGAGCTAGGAATGTGGGCCTGGCAGAGACCGAAGGCTGGGTGGGAAGGAAGCTCGCGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR GCA 72 bp ACGAACTCCTTGAAGTCTGGGGCCTCATCCGTCTTCTaGTGGATCAGGGCAGCCCCGTTGAGCTGGCGGCTG +
Preference number: 3 (lower is better)
Translates to: TNSLKSGASSVF*WIRAAPLSWRL
Trigger: CAGCCGCCAGCTCAACGGGGCTGCCCTGATCCAGCAGAAGACGGATGAGGCCCCAGACTTCAAGGAGTTCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381285.8
3UTR GCA 72 bp CACCCTGAGCCCGCTGCCTACGGCTCATCAAACAACTaGAGGTCCAAGCGGACCACAATCTCTCCCGTGGGG +
Preference number: 3 (lower is better)
Translates to: HPEPAAYGSSNN*RSKRTTISPVG
Trigger: CCCCACGGGAGAGATTGTGGTCCGCTTGGACCTGCAGTTGTTTGATGAGCCGTAGGCAGCGGGCTCAGGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381285.8
3UTR CCA 72 bp AACTCCTTGAAGTCTGGGGCCTCATCCGTCTTCTGCTaGATCAGGGCAGCCCCGTTGAGCTGGCGGCTGCAG +
Preference number: 3 (lower is better)
Translates to: NSLKSGASSVFC*IRAAPLSWRLQ
Trigger: CTGCAGCCGCCAGCTCAACGGGGCTGCCCTGATCCAGCAGAAGACGGATGAGGCCCCAGACTTCAAGGAGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381285.8
3UTR TCA 72 bp CGGACCTCTGCCTTAACTGGCCGGCACTTGGAACGGTaGGAGAGGGCTGGGCTGCCCATGCATCCCAGTTAT +
Preference number: 3 (lower is better)
Translates to: RTSALTGRHLER*ERAGLPMHPSY
Trigger: ATAACTGGGATGCATGGGCAGCCCAGCCCTCTCTCACCGTTCCAAGTGCCGGCCAGTTAAGGCAGAGGTCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379960.9
ENST00000419241.1
3UTR CCA 72 bp GCCACGTCTTCATCAGAAACCGGGCTGGCAGGCACATaGCAGTGGCAGGGGATGCAAACGGGCCTAAGACTG +
Preference number: 3 (lower is better)
Translates to: ATSSSETGLAGT*QWQGMQTGLRL
Trigger: CAGTCTTAGGCCCGTTTGCATCCCCTGCCACTGCCATGTGCCTGCCAGCCCGGTTTCTGATGAAGACGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR CCA 72 bp CAGGGCTGTGAGGGAAGCAACATGCCACCAGCACTGTaGCCCGCTTGTCACTGGAAGCACAAGGAGCTCACG +
Preference number: 3 (lower is better)
Translates to: QGCEGSNMPPAL*PACHWKHKELT
Trigger: CGTGAGCTCCTTGTGCTTCCAGTGACAAGCGGGCCACAGTGCTGGTGGCATGTTGCTTCCCTCACAGCCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR CCA 72 bp GAATACAATTTCCAGACAGCATGTGTGGCCGTGGGCTaGGACCCTGCTGAGCACACCCTGAGCCCGCTGCCT +
Preference number: 3 (lower is better)
Translates to: EYNFQTACVAVG*DPAEHTLSPLP
Trigger: AGGCAGCGGGCTCAGGGTGTGCTCAGCAGGGTCCCAGCCCACGGCCACACATGCTGTCTGGAAATTGTATTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381285.8
3UTR CCA 72 bp GAAGCACAATCCGGGGCTGCATGTGGCCTAGTCTCATaGAGGGGTGGAGGAGGAAGTCAGGCTGGCCTAGCA +
Preference number: 3 (lower is better)
Translates to: EAQSGAACGLVS*RGGGGSQAGLA
Trigger: TGCTAGGCCAGCCTGACTTCCTCCTCCACCCCTCCATGAGACTAGGCCACATGCAGCCCCGGATTGTGCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419241.1
3UTR CCA 72 bp GGGTCCGGGAAGAGAAGCACAATCCGGGGCTGCATGTaGCCTAGTCTCATGGAGGGGTGGAGGAGGAAGTCA +
Preference number: 3 (lower is better)
Translates to: GSGKRSTIRGCM*PSLMEGWRRKS
Trigger: TGACTTCCTCCTCCACCCCTCCATGAGACTAGGCCACATGCAGCCCCGGATTGTGCTTCTCTTCCCGGACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419241.1
3UTR-3UTR CAA 90 bp TTCCAGTTGTCTTTTGCGCTCTTGCTCCTGGCGCTCACGCTCCTTCCTCTCCTGAGGCGCTCCTGCTCCTaGCGCTGCTGTTCCAGGAGA +
Preference number: 3 (lower is better)
Translates to: FQLSFALLLLALTLLPLLRRSCS*RCCSRR
Trigger: TCTCCTGGAACAGCAGCGCAAGGAGCAGGAGCGCCT...CAGGAGAGGAAGGAGCGTGAGCGCCAGGAGCAAGAGCGCAAAAGACAACTGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379960.9
3UTR GCA 72 bp GAGACAGCCGGCCTGCTTAGCCTTGGAAGGCAGACCTaGAAGTGTCCTTCCCTGCTGGCGCTAGCACCTAAT +
Preference number: 3 (lower is better)
Translates to: ETAGLLSLGRQT*KCPSLLALAPN
Trigger: ATTAGGTGCTAGCGCCAGCAGGGAAGGACACTTGCAGGTCTGCCTTCCAAGGCTAAGCAGGCCGGCTGTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR CCA 72 bp GGGCTGGGCTGCCCATGCATCCCAGTTATCCGTTTCTaGTTTCTCATTCGTGCTGGTGGGCCACGTGGAGCT +
Preference number: 3 (lower is better)
Translates to: GLGCPCIPVIRF*FLIRAGGPRGA
Trigger: AGCTCCACGTGGCCCACCAGCACGAATGAGAAACCAGAAACGGATAACTGGGATGCATGGGCAGCCCAGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379960.9
ENST00000419241.1
3UTR CCA 72 bp ATCCCCATACATGGGATCCTAAGGGGAGAGTCTAGCTaGGAGGTCGCAGCCTCTCCGAAGCAGGTTCCTCCC +
Preference number: 3 (lower is better)
Translates to: IPIHGILRGESS*EVAASPKQVPP
Trigger: GGGAGGAACCTGCTTCGGAGAGGCTGCGACCTCCCAGCTAGACTCTCCCCTTAGGATCCCATGTATGGGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR-3UTR CAA 90 bp GGGCACTTCTGGTGGCCAAGTACAGAAAGTCTGTGCCCCAGAAGCAGCCTGGACGAGGACACCTGGGCTTaGGTACCAGGTCACCGAGAT +
Preference number: 3 (lower is better)
Translates to: GHFWWPSTESLCPRSSLDEDTWA*VPGHRD
Trigger: ATCTCGGTGACCTGGTACCAAAGCCCAGGTGTCCTC...GTCCAGGCTGCTTCTGGGGCACAGACTTTCTGTACTTGGCCACCAGAAGTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR TCA 72 bp CTCACGCAAGGCCAGTTTGGGGGCAGGGGCAGATGTTaGATCAGTCACTGGTTTCACTGGAGCGGGAACCTC +
Preference number: 3 (lower is better)
Translates to: LTQGQFGGRGRC*ISHWFHWSGNL
Trigger: GAGGTTCCCGCTCCAGTGAAACCAGTGACTGATTCAACATCTGCCCCTGCCCCCAAACTGGCCTTGCGTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379960.9
ENST00000419241.1
3UTR GCA 72 bp CGCTCCTGCTCCTTGCGCTGCTGTTCCAGGAGAGCTTaGCTTCGTTTCTCCAGTTCCAGGTTGCCACGTTCA +
Preference number: 3 (lower is better)
Translates to: RSCSLRCCSRRA*LRFSSSRLPRS
Trigger: TGAACGTGGCAACCTGGAACTGGAGAAACGAAGGCAAGCTCTCCTGGAACAGCAGCGCAAGGAGCAGGAGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379960.9
3UTR GCA 72 bp CCTGTAAGGTCACTGGGCAGAAGAGCTAGAGGGAGCTaGCCCGTGAATGGCAGCTGTGGTTTCTTTGCACCC +
Preference number: 3 (lower is better)
Translates to: PVRSLGRRARGS*PVNGSCGFFAP
Trigger: GGGTGCAAAGAAACCACAGCTGCCATTCACGGGGCAGCTCCCTCTAGCTCTTCTGCCCAGTGACCTTACAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR CCA 72 bp CTTAACTGGCCGGCACTTGGAACGGTGAGAGAGGGCTaGGCTGCCCATGCATCCCAGTTATCCGTTTCTGGT +
Preference number: 3 (lower is better)
Translates to: LNWPALGTVREG*AAHASQLSVSG
Trigger: ACCAGAAACGGATAACTGGGATGCATGGGCAGCCCAGCCCTCTCTCACCGTTCCAAGTGCCGGCCAGTTAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379960.9
ENST00000419241.1
3UTR CCA 72 bp GCAGTATTTCCAGGCTGCCAGGGGAGGCTGGACTCCTaGGGTTGCCCCCTCCTGAAATCATTTCTGAATGCC +
Preference number: 3 (lower is better)
Translates to: AVFPGCQGRLDS*GCPLLKSFLNA
Trigger: GGCATTCAGAAATGATTTCAGGAGGGGGCAACCCCAGGAGTCCAGCCTCCCCTGGCAGCCTGGAAATACTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR TCA 72 bp GAACGAGGAGGAGAGGTCCTCGCTCTCTGCACCATGTaGAAGGAGAAGGACCTCTACACGACCACCAGCACA +
Preference number: 3 (lower is better)
Translates to: ERGGEVLALCTM*KEKDLYTTTST
Trigger: TGTGCTGGTGGTCGTGTAGAGGTCCTTCTCCTTTCACATGGTGCAGAGAGCGAGGACCTCTCCTCCTCGTTC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
3UTR TCA 72 bp ATTCACTCTAGAAGGCGGGCCCTGGGCTACTGCACATaGAGTACAAGCCACTGCGACAAGGAGAGCAGGGAC +
Preference number: 3 (lower is better)
Translates to: IHSRRRALGYCT*STSHCDKESRD
Trigger: GTCCCTGCTCTCCTTGTCGCAGTGGCTTGTACTTCATGTGCAGTAGCCCAGGGCCCGCCTTCTAGAGTGAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR TCA 72 bp TGCGGTAGGTGGAGCCGGCACCTTGAAATCTGCCAGTaGAAACAGCGAGTTTCCTCCTCCTACAGGGAGACC +
Preference number: 3 (lower is better)
Translates to: CGRWSRHLEICQ*KQRVSSSYRET
Trigger: GGTCTCCCTGTAGGAGGAGGAAACTCGCTGTTTTCACTGGCAGATTTCAAGGTGCCGGCTCCACCTACCGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR GCA 72 bp GAGGGACCAGGATGTGGACTCTGCCTTCTAGAGAACTaGTCTGTGAAGAAGGCTCAGCCCAAGAGGTCCCAG +
Preference number: 3 (lower is better)
Translates to: EGPGCGLCLLEN*SVKKAQPKRSQ
Trigger: CTGGGACCTCTTGGGCTGAGCCTTCTTCACAGAGCAGTTCTCTAGAAGGCAGAGTCCACATCCTGGTCCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR GCA 72 bp ACTTGTCCTAGCCAGTTCCTGGAGAGACAGCCGGCCTaGTTAGCCTTGGAAGGCAGACCTGCAAGTGTCCTT +
Preference number: 3 (lower is better)
Translates to: TCPSQFLERQPA*LALEGRPASVL
Trigger: AAGGACACTTGCAGGTCTGCCTTCCAAGGCTAAGCAGGCCGGCTGTCTCTCCAGGAACTGGCTAGGACAAGT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR GCA 72 bp TTTTGCACCAACCTAATCCAATTAGGCTTGCTTGAATaGCACCAAGGCAGGCCCGTCCAGCTGCCGCCCAGC +
Preference number: 3 (lower is better)
Translates to: FCTNLIQLGLLE*HQGRPVQLPPS
Trigger: GCTGGGCGGCAGCTGGACGGGCCTGCCTTGGTGGCATTCAAGCAAGCCTAATTGGATTAGGTTGGTGCAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR GCA 72 bp CCTTCTGCGATCTACACAAGAGCAATGCCTAGCAGCTaGGGTAGGTGGAGCCGGCACCTTGAAATCTGCCAG +
Preference number: 3 (lower is better)
Translates to: PSAIYTRAMPSS*GRWSRHLEICQ
Trigger: CTGGCAGATTTCAAGGTGCCGGCTCCACCTACCGCAGCTGCTAGGCATTGCTCTTGTGTAGATCGCAGAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR GCA 72 bp CAAACACATACATGCACACGCACGCACAAACACGCATaGACACACCACGCACTGAGCTGCTGCGTCCCACCA +
Preference number: 3 (lower is better)
Translates to: QTHTCTRTHKHA*THHALSCCVPP
Trigger: TGGTGGGACGCAGCAGCTCAGTGCGTGGTGTGTGCATGCGTGTTTGTGCGTGCGTGTGCATGTATGTGTTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR CCA 72 bp TTCTCAATCCCTGTGACACAACTCATGAATCACAGCTaGGTCCGAGGGCCAGCCCGACTCCTCCATACGGAC +
Preference number: 3 (lower is better)
Translates to: FSIPVTQLMNHS*VRGPARLLHTD
Trigger: GTCCGTATGGAGGAGTCGGGCTGGCCCTCGGACCCAGCTGTGATTCATGAGTTGTGTCACAGGGATTGAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR CCA 72 bp GGCTCGAGGGAAACATTCACTCTAGAAGGCGGGCCCTaGGCTACTGCACATGAAGTACAAGCCACTGCGACA +
Preference number: 3 (lower is better)
Translates to: GSRETFTLEGGP*ATAHEVQATAT
Trigger: TGTCGCAGTGGCTTGTACTTCATGTGCAGTAGCCCAGGGCCCGCCTTCTAGAGTGAATGTTTCCCTCGAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR-3UTR CAA 90 bp ACTGAAGTGCAACTGAACGAGGAGGAGAGGTCCTCGCTCTCTGCACCATGTGAAAGGAGGACAGCTAGATaGTGCTTGAGGCTCCCCCTG +
Preference number: 3 (lower is better)
Translates to: TEVQLNEEERSSLSAPCERRTAR*CLRLPL
Trigger: CAGGGGGAGCCTCAAGCACAATCTAGCTGTCCTCCT...TTCACATGGTGCAGAGAGCGAGGACCTCTCCTCCTCGTTCAGTTGCACTTCAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
3UTR TCA 72 bp GGTGCCTGGACAGCTGGCTTAGCTGGTTCTTGGTGTTaGTGGAAAAGCCGACCCAGCTTGTCTTGTGCTTCC +
Preference number: 3 (lower is better)
Translates to: GAWTAGLAGSWC*WKSRPSLSCAS
Trigger: GGAAGCACAAGACAAGCTGGGTCGGCTTTTCCATCAACACCAAGAACCAGCTAAGCCAGCTGTCCAGGCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379960.9
3UTR GCA 72 bp GGCACTTGGAACGGTGAGAGAGGGCTGGGCTGCCCATaGATCCCAGTTATCCGTTTCTGGTTTCTCATTCGT +
Preference number: 3 (lower is better)
Translates to: GTWNGERGLGCP*IPVIRFWFLIR
Trigger: ACGAATGAGAAACCAGAAACGGATAACTGGGATGCATGGGCAGCCCAGCCCTCTCTCACCGTTCCAAGTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379960.9
ENST00000419241.1
3UTR GCA 72 bp AGTGTCTTAGGTCTTTGCCCCGGGATGTGCGGGGCTTaGATCCTCCTAGGGTCTTTCACCCACCACATAATG +
Preference number: 3 (lower is better)
Translates to: SVLGLCPGMCGA*ILLGSFTHHIM
Trigger: CATTATGTGGTGGGTGAAAGACCCTAGGAGGATGCAAGCCCCGCACATCCCGGGGCAAAGACCTAAGACACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR GCA 72 bp CGTATTTCCTGTTTCCCTCTCCAAGGCACAGAGCCATaGATCCCCCTAGGTGTGGGTAGGTACACACGCATG +
Preference number: 3 (lower is better)
Translates to: RISCFPLQGTEP*IPLGVGRYTRM
Trigger: CATGCGTGTGTACCTACCCACACCTAGGGGGATGCATGGCTCTGTGCCTTGGAGAGGGAAACAGGAAATACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR GCA 72 bp TCCAAGCGGACCACAATCTCTCCCGTGGGGACTTCGTaGAGCAGAAGACACTTCGTAACTGGACCTTTGGAG +
Preference number: 3 (lower is better)
Translates to: SKRTTISPVGTS*SRRHFVTGPLE
Trigger: CTCCAAAGGTCCAGTTACGAAGTGTCTTCTGCTGCACGAAGTCCCCACGGGAGAGATTGTGGTCCGCTTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381285.8
3UTR CCA 72 bp AGAATCCTCCTTAGGTGGCCTAAGGGGCACTTCTGGTaGCCAAGTACAGAAAGTCTGTGCCCCAGAAGCAGC +
Preference number: 3 (lower is better)
Translates to: RILLRWPKGHFW*PSTESLCPRSS
Trigger: GCTGCTTCTGGGGCACAGACTTTCTGTACTTGGCCACCAGAAGTGCCCCTTAGGCCACCTAAGGAGGATTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR CCA 72 bp CACAGAATCCTCCTTAGGTGGCCTAAGGGGCACTTCTaGTGGCCAAGTACAGAAAGTCTGTGCCCCAGAAGC +
Preference number: 3 (lower is better)
Translates to: HRILLRWPKGHF*WPSTESLCPRS
Trigger: GCTTCTGGGGCACAGACTTTCTGTACTTGGCCACCAGAAGTGCCCCTTAGGCCACCTAAGGAGGATTCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR CCA 72 bp CGTGGGGACTTCGTGCAGCAGAAGACACTTCGTAACTaGACCTTTGGAGCCCTGGTCTTTCTTGATGTCCGC +
Preference number: 3 (lower is better)
Translates to: RGDFVQQKTLRN*TFGALVFLDVR
Trigger: GCGGACATCAAGAAAGACCAGGGCTCCAAAGGTCCAGTTACGAAGTGTCTTCTGCTGCACGAAGTCCCCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381285.8
3UTR-3UTR CAA 90 bp GAAACGACCGGCTTGGCTGCTGGAGAGGCTACTCGCTTTAGACTAGCAGGACTCTTTCAAGTTCCCGTTTaGCAGCCTCTCGCCTCTCAA +
Preference number: 3 (lower is better)
Translates to: ETTGLAAGEATRFRLAGLFQVPV*QPLASQ
Trigger: TTGAGAGGCGAGAGGCTGCAAAACGGGAACTTGAAA...GAGTCCTGCTAGTCTAAAGCGAGTAGCCTCTCCAGCAGCCAAGCCGGTCGTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379960.9
3UTR-3UTR CAA 90 bp GAAACGACCGGCTTGGCTGCTGGAGAGGCTACTCGCTTTAGACTAGCAGGACTCCCAACCCTTCTGACCTaGAACTTCTCCAAACCACCA +
Preference number: 3 (lower is better)
Translates to: ETTGLAAGEATRFRLAGLPTLLT*NFSKPP
Trigger: TGGTGGTTTGGAGAAGTTCAAGGTCAGAAGGGTTGG...GAGTCCTGCTAGTCTAAAGCGAGTAGCCTCTCCAGCAGCCAAGCCGGTCGTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379960.9
3UTR-3UTR CAA 90 bp CTGCACCATGTGAAAGGAGAAGGACCTCTACACGACCACCAGCACAGCCTCCCGAGACTGTGGATATCGTaGATCGTAACGACCTCAGTG +
Preference number: 3 (lower is better)
Translates to: LHHVKGEGPLHDHQHSLPRLWIS*IVTTSV
Trigger: CACTGAGGTCGTTACGATCAACGATATCCACAGTCT...CGGGAGGCTGTGCTGGTGGTCGTGTAGAGGTCCTTCTCCTTTCACATGGTGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
3UTR-3UTR CAA 90 bp GGACCTTTGGAGCCCTGGTCTTTCTTGATGTCCGCCACACGGATCTCCGTCCGACTCGTGGATGTATCCTaGTCGCTTTCTTTCAGTTGG +
Preference number: 3 (lower is better)
Translates to: GPLEPWSFLMSATRISVRLVDVS*SLSFSW
Trigger: CCAACTGAAAGAAAGCGACAAGGATACATCCACGAG...TCGGACGGAGATCCGTGTGGCGGACATCAAGAAAGACCAGGGCTCCAAAGGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381285.8
3UTR-3UTR CAA 90 bp TCATCAAACAACTGCAGGTCCAAGCGGACCACAATCTCTCCCGTGGGGACTTCGACCTCACAGTACGGGTaGCTCTTTCCATGTGACCGA +
Preference number: 3 (lower is better)
Translates to: SSNNCRSKRTTISPVGTSTSQYG*LFPCDR
Trigger: TCGGTCACATGGAAAGAGCAACCCGTACTGTGAGGT...CGAAGTCCCCACGGGAGAGATTGTGGTCCGCTTGGACCTGCAGTTGTTTGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381285.8
3UTR TCA 72 bp GCAGGATCCAGAGGAAGCTGTGGGGCGCCATTAAGTTaGCCAGCCAATTACTTCCTCCGTGTCAGGTCTAAC +
Preference number: 3 (lower is better)
Translates to: AGSRGSCGAPLS*PANYFLRVRSN
Trigger: GTTAGACCTGACACGGAGGAAGTAATTGGCTGGTCAACTTAATGGCGCCCCACAGCTTCCTCTGGATCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR TCA 72 bp TTGAAACAACCAAGGCCCAAGGGACAGTTGACTGGCTaGCTTGTTTCCACTCACAGCCCTCTTGCCACCCCA +
Preference number: 3 (lower is better)
Translates to: LKQPRPKGQLTG*LVSTHSPLATP
Trigger: TGGGGTGGCAAGAGGGCTGTGAGTGGAAACAAGTCAGCCAGTCAACTGTCCCTTGGGCCTTGGTTGTTTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR GCA 72 bp GCTTTTCCAGTTGCTTCTCCAGTTCCAGTTGTCTTTTaGGCTCTTGCTCCTGGCGCTCACGCTCCTTCCTCT +
Preference number: 3 (lower is better)
Translates to: AFPVASPVPVVF*ALAPGAHAPSS
Trigger: AGAGGAAGGAGCGTGAGCGCCAGGAGCAAGAGCGCAAAAGACAACTGGAACTGGAGAAGCAACTGGAAAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379960.9
3UTR GCA 72 bp CGCCTCTCAATTTCTTTCCTCCTCTCCTCCTCTCTCTaGCGTTCTAGCTCCCGCTGCTTTTCCAGTTGCTTC +
Preference number: 3 (lower is better)
Translates to: RLSISFLLSSSL*RSSSRCFSSCF
Trigger: GAAGCAACTGGAAAAGCAGCGGGAGCTAGAACGGCAGAGAGAGGAGGAGAGGAGGAAAGAAATTGAGAGGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379960.9
3UTR GCA 72 bp TTCAACCACGTTCACCATCAACCTTCCAATGCCTGTTaGCCTTTGGGAACGGACCAGGTACGCTTTCTCGCG +
Preference number: 3 (lower is better)
Translates to: FNHVHHQPSNAC*PLGTDQVRFLA
Trigger: CGCGAGAAAGCGTACCTGGTCCGTTCCCAAAGGGCAACAGGCATTGGAAGGTTGATGGTGAACGTGGTTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000420666.1
3UTR GCA 72 bp CGATGCCTTCAACCACGTTCACCATCAACCTTCCAATaGCTGTTGCCCTTTGGGAACGGACCAGGTACGCTT +
Preference number: 3 (lower is better)
Translates to: RCLQPRSPSTFQ*LLPFGNGPGTL
Trigger: AAGCGTACCTGGTCCGTTCCCAAAGGGCAACAGGCATTGGAAGGTTGATGGTGAACGTGGTTGAAGGCATCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000420666.1
3UTR CCA 72 bp ACCTTTTTCTGCAGTGGACCAGGGTGCCTGGACAGCTaGCTTAGCTGGTTCTTGGTGTTGATGGAAAAGCCG +
Preference number: 3 (lower is better)
Translates to: TFFCSGPGCLDS*LSWFLVLMEKP
Trigger: CGGCTTTTCCATCAACACCAAGAACCAGCTAAGCCAGCTGTCCAGGCACCCTGGTCCACTGCAGAAAAAGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379960.9
3UTR CCA 72 bp AAAGGAGATCAGAGTGTGCAGGAGAAGCTAGCAGTGTaGCTCAGAGCAGAGGAACGCTTGCAGGGGTGTCTA +
Preference number: 3 (lower is better)
Translates to: KGDQSVQEKLAV*LRAEERLQGCL
Trigger: TAGACACCCCTGCAAGCGTTCCTCTGCTCTGAGCCACACTGCTAGCTTCTCCTGCACACTCTGATCTCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR CCA 72 bp AGCCACATCTTCAGGCTCTCATGGTCACAGCAAACCTaGTTCCAGGAGATGATGCTGTCCATCCACCTGCCA +
Preference number: 3 (lower is better)
Translates to: SHIFRLSWSQQT*FQEMMLSIHLP
Trigger: TGGCAGGTGGATGGACAGCATCATCTCCTGGAACCAGGTTTGCTGTGACCATGAGAGCCTGAAGATGTGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR CCA 72 bp GCCTGGATCCGAATGAGCCACATCTTCAGGCTCTCATaGTCACAGCAAACCTGGTTCCAGGAGATGATGCTG +
Preference number: 3 (lower is better)
Translates to: AWIRMSHIFRLS*SQQTWFQEMML
Trigger: CAGCATCATCTCCTGGAACCAGGTTTGCTGTGACCATGAGAGCCTGAAGATGTGGCTCATTCGGATCCAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR CCA 72 bp CACCCCAGAATACTCCCCTGGAGGACACCTGGGCTTTaGTACCAGGTCACCGAGATAAGACTTAATGTGGGT +
Preference number: 3 (lower is better)
Translates to: HPRILPWRTPGL*YQVTEIRLNVG
Trigger: ACCCACATTAAGTCTTATCTCGGTGACCTGGTACCAAAGCCCAGGTGTCCTCCAGGGGAGTATTCTGGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR CCA 72 bp GGCCAAGTACAGAAAGTCTGTGCCCCAGAAGCAGCCTaGACTTCTGATCCTTTTCTGGGAATGCAGACGGGA +
Preference number: 3 (lower is better)
Translates to: GQVQKVCAPEAA*TSDPFLGMQTG
Trigger: TCCCGTCTGCATTCCCAGAAAAGGATCAGAAGTCCAGGCTGCTTCTGGGGCACAGACTTTCTGTACTTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR CCA 72 bp AGCAGAAGACACTTCGTAACTGGACCTTTGGAGCCCTaGTCTTTCTTGATGTCCGCCACACGGATCTCCGTC +
Preference number: 3 (lower is better)
Translates to: SRRHFVTGPLEP*SFLMSATRISV
Trigger: GACGGAGATCCGTGTGGCGGACATCAAGAAAGACCAGGGCTCCAAAGGTCCAGTTACGAAGTGTCTTCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381285.8
3UTR-3UTR CAA 90 bp GCTGCCCATGCATCCCAGTTATCCGTTTCTGGTTTCTCATTCGTGCTGGTGGGCTGGCTTAGCTGGTTCTaGGTGTTGATGGAAAAGCCG +
Preference number: 3 (lower is better)
Translates to: AAHASQLSVSGFSFVLVGWLSWF*VLMEKP
Trigger: CGGCTTTTCCATCAACACCAAGAACCAGCTAAGCCA...GCCCACCAGCACGAATGAGAAACCAGAAACGGATAACTGGGATGCATGGGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379960.9
3UTR-3UTR CAA 90 bp CACCATGTGAAAGGAGAAGGACCTCTACACGACCACCAGCACAGCCTCCCGACAAGACTGTGGATATCGTaGATCGTAACGACCTCAGTG +
Preference number: 3 (lower is better)
Translates to: HHVKGEGPLHDHQHSLPTRLWIS*IVTTSV
Trigger: CACTGAGGTCGTTACGATCAACGATATCCACAGTCT...TGTCGGGAGGCTGTGCTGGTGGTCGTGTAGAGGTCCTTCTCCTTTCACATGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
3UTR TCA 72 bp TCTGCTGCTTTACGATATCACCTCATGAGTGCAGCCTaGCGGACAAGGAAAGCCCACCTTCCTCTAGAAGGG +
Preference number: 3 (lower is better)
Translates to: SAALRYHLMSAA*RTRKAHLPLEG
Trigger: CCCTTCTAGAGGAAGGTGGGCTTTCCTTGTCCGTCAGGCTGCACTCATGAGGTGATATCGTAAAGCAGCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR TCA 72 bp CCCTCAGTCTTTCTGCTGCTTTACGATATCACCTCATaGGTGCAGCCTGACGGACAAGGAAAGCCCACCTTC +
Preference number: 3 (lower is better)
Translates to: PSVFLLLYDITS*VQPDGQGKPTF
Trigger: GAAGGTGGGCTTTCCTTGTCCGTCAGGCTGCACTCATGAGGTGATATCGTAAAGCAGCAGAAAGACTGAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR TCA 72 bp GTCAGCTGCCTCCCGGGGCCATGGTCTTCTAGAACTTaGGGCTACTTACACAGAGGGATCTTTTCTCTCCTA +
Preference number: 3 (lower is better)
Translates to: VSCLPGPWSSRT*GYLHRGIFSLL
Trigger: TAGGAGAGAAAAGATCCCTCTGTGTAAGTAGCCTCAAGTTCTAGAAGACCATGGCCCCGGGAGGCAGCTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR GCA 72 bp TCTTGCCTTCGATTCCGTTCCCACTCAAGTTGTCGTTaGCTTTCAAGTTCCCGTTTTGCAGCCTCTCGCCTC +
Preference number: 3 (lower is better)
Translates to: SCLRFRSHSSCR*LSSSRFAASRL
Trigger: GAGGCGAGAGGCTGCAAAACGGGAACTTGAAAGGCAACGACAACTTGAGTGGGAACGGAATCGAAGGCAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379960.9
3UTR GCA 72 bp AATGGTAAGTGGACCTTTTTCTGCAGTGGACCAGGGTaGCTGGACAGCTGGCTTAGCTGGTTCTTGGTGTTG +
Preference number: 3 (lower is better)
Translates to: NGKWTFFCSGPG*LDSWLSWFLVL
Trigger: CAACACCAAGAACCAGCTAAGCCAGCTGTCCAGGCACCCTGGTCCACTGCAGAAAAAGGTCCACTTACCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379960.9
3UTR GCA 72 bp AGGGAGCTGCCCCGTGAATGGCAGCTGTGGTTTCTTTaGACCCTCAGTCTTTCTGCTGCTTTACGATATCAC +
Preference number: 3 (lower is better)
Translates to: RELPREWQLWFL*TLSLSAALRYH
Trigger: GTGATATCGTAAAGCAGCAGAAAGACTGAGGGTGCAAAGAAACCACAGCTGCCATTCACGGGGCAGCTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR-3UTR CAA 90 bp GAGAGAGGGCTGGGCTGCCCATGCATCCCAGTTATCCGTTTCTGGTTTCTCATTTTCTCCAGTTCCAGGTaGCCACGTTCAAAGTTCTCC +
Preference number: 3 (lower is better)
Translates to: ERGLGCPCIPVIRFWFLIFSSSR*PRSKFS
Trigger: GGAGAACTTTGAACGTGGCAACCTGGAACTGGAGAA...AATGAGAAACCAGAAACGGATAACTGGGATGCATGGGCAGCCCAGCCCTCTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379960.9
3UTR-3UTR CAA 90 bp CTTCTAGAACTTGAGGCTACTTACACAGAGGGATCTTTTCTCTCCTACCATCCCCAGGGAATGCATCCCTaGGCCCCCAGGATAGCTCTC +
Preference number: 3 (lower is better)
Translates to: LLELEATYTEGSFLSYHPQGMHP*APRIAL
Trigger: GAGAGCTATCCTGGGGGCCAAGGGATGCATTCCCTG...GGGATGGTAGGAGAGAAAAGATCCCTCTGTGTAAGTAGCCTCAAGTTCTAGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR-3UTR CAA 90 bp GGGATTTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAGGAATTGAGGGGCCTGTCTTaGCCATCCCATATCCCTGTG +
Preference number: 3 (lower is better)
Translates to: GISATLEAIMRPVVRTKELRGLS*PSHIPV
Trigger: CACAGGGATATGGGATGGCAAAGACAGGCCCCTCAA...TTCCTTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAAATCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
3UTR TCA 72 bp AGGGACACTGAGCACTTCTATGACCCTGCTTCTCTTTaGAGGCAGAAGGTTGGAAAAGGCTTGCTGTCCTCC +
Preference number: 3 (lower is better)
Translates to: RDTEHFYDPASL*RQKVGKGLLSS
Trigger: GGAGGACAGCAAGCCTTTTCCAACCTTCTGCCTTCAAAGAGAAGCAGGGTCATAGAAGTGCTCAGTGTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR TCA 72 bp GAGGGCACAGACTCCGGCTTGCGGGGCTACAGCAGATaGGATCTGAGGTTGATTTCACAGTTCAAAGATACT +
Preference number: 3 (lower is better)
Translates to: EGTDSGLRGYSR*DLRLISQFKDT
Trigger: AGTATCTTTGAACTGTGAAATCAACCTCAGATCTCATCTGCTGTAGCCCCGCAAGCCGGAGTCTGTGCCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR GCA 72 bp GCAGCTGTGGTTTCTTTGCACCCTCAGTCTTTCTGCTaGTTTACGATATCACCTCATGAGTGCAGCCTGACG +
Preference number: 3 (lower is better)
Translates to: AAVVSLHPQSFC*FTISPHECSLT
Trigger: CGTCAGGCTGCACTCATGAGGTGATATCGTAAAGCAGCAGAAAGACTGAGGGTGCAAAGAAACCACAGCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR GCA 72 bp CTGCAAAGCCACTACACCCTTTCTTTGGTTCCTGTCTaGCTGAGGCCCCCATTCTGTTTAGATACAGGAACG +
Preference number: 3 (lower is better)
Translates to: LQSHYTLSLVPV*LRPPFCLDTGT
Trigger: CGTTCCTGTATCTAAACAGAATGGGGGCCTCAGGCAGACAGGAACCAAAGAAAGGGTGTAGTGGCTTTGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR GCA 72 bp CACAAACACGCATGCACACACCACGCACTGAGCTGCTaGGTCCCACCAACAAAAATTCCCTTCCACCTAAAA +
Preference number: 3 (lower is better)
Translates to: HKHACTHHALSC*VPPTKIPFHLK
Trigger: TTTTAGGTGGAAGGGAATTTTTGTTGGTGGGACGCAGCAGCTCAGTGCGTGGTGTGTGCATGCGTGTTTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR-3UTR CAA 90 bp GTTCTTGTTCTTTCTGTTTCAGTCGTTCAGCCTCCATGGACTTTTGCTTCTGGATTGTCTTTTGCGCTCTaGCTCCTGGCGCTCACGCTC +
Preference number: 3 (lower is better)
Translates to: VLVLSVSVVQPPWTFASGLSFAL*LLALTL
Trigger: GAGCGTGAGCGCCAGGAGCAAGAGCGCAAAAGACAA...TCCAGAAGCAAAAGTCCATGGAGGCTGAACGACTGAAACAGAAAGAACAAGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379960.9
3UTR-3UTR CAA 90 bp ACTGAAGTGCAACTGAACGAGGAGGAGAGGTCCTCGCTCTCTGCACCATGTGAACACATGCAGCATTCCTaGATAGTGGGTCTTTTTGCA +
Preference number: 3 (lower is better)
Translates to: TEVQLNEEERSSLSAPCEHMQHS*IVGLFA
Trigger: TGCAAAAAGACCCACTATCAAGGAATGCTGCATGTG...TTCACATGGTGCAGAGAGCGAGGACCTCTCCTCCTCGTTCAGTTGCACTTCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
3UTR TCA 72 bp CAGGAAGCTTCCAGAAATCACAGCTTCCCATACTCCTaGAGTCAGCAGCTTTACTGGTTCGGGCCTCTCAAA +
Preference number: 3 (lower is better)
Translates to: QEASRNHSFPYS*SQQLYWFGPLK
Trigger: TTTGAGAGGCCCGAACCAGTAAAGCTGCTGACTTCAGGAGTATGGGAAGCTGTGATTTCTGGAAGCTTCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR TCA 72 bp GAAATTTGCGCGGCCCCAAGCAATTGGTCACTGAATTaGACACAAGTTGCTCAGACAGGCCTTCACACTGCA +
Preference number: 3 (lower is better)
Translates to: EICAAPSNWSLN*TQVAQTGLHTA
Trigger: TGCAGTGTGAAGGCCTGTCTGAGCAACTTGTGTTCAATTCAGTGACCAATTGCTTGGGGCCGCGCAAATTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381285.8
3UTR TCA 72 bp GTGCAGAAATTTGCGCGGCCCCAAGCAATTGGTCACTaGATTGAACACAAGTTGCTCAGACAGGCCTTCACA +
Preference number: 3 (lower is better)
Translates to: VQKFARPQAIGH*IEHKLLRQAFT
Trigger: TGTGAAGGCCTGTCTGAGCAACTTGTGTTCAATTCAGTGACCAATTGCTTGGGGCCGCGCAAATTTCTGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381285.8
3UTR GCA 72 bp CCAGGAGAGCTTGCCTTCGTTTCTCCAGTTCCAGGTTaGCACGTTCAAAGTTCTCCCGCTTCTTATCTTCAA +
Preference number: 3 (lower is better)
Translates to: PGELAFVSPVPG*HVQSSPASYLQ
Trigger: TTGAAGATAAGAAGCGGGAGAACTTTGAACGTGGCAACCTGGAACTGGAGAAACGAAGGCAAGCTCTCCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379960.9
3UTR GCA 72 bp CATTCAAGCACAGAACAGGTCACCAGCAACGACTGCTaGTATGAAATATCACAGGCCTCCGAGCCAAAAGAG +
Preference number: 3 (lower is better)
Translates to: HSSTEQVTSNDC*YEISQASEPKE
Trigger: CTCTTTTGGCTCGGAGGCCTGTGATATTTCATAGCAGCAGTCGTTGCTGGTGACCTGTTCTGTGCTTGAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000381318.8
3UTR GCA 72 bp GCACATTCAAGCACAGAACAGGTCACCAGCAACGACTaGTGCTATGAAATATCACAGGCCTCCGAGCCAAAA +
Preference number: 3 (lower is better)
Translates to: AHSSTEQVTSND*CYEISQASEPK
Trigger: TTTTGGCTCGGAGGCCTGTGATATTTCATAGCAGCAGTCGTTGCTGGTGACCTGTTCTGTGCTTGAATGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000381318.8
3UTR GCA 72 bp ATGGCAGCTGTGGTTTCTTTGCACCCTCAGTCTTTCTaGTGCTTTACGATATCACCTCATGAGTGCAGCCTG +
Preference number: 3 (lower is better)
Translates to: MAAVVSLHPQSF*CFTISPHECSL
Trigger: CAGGCTGCACTCATGAGGTGATATCGTAAAGCAGCAGAAAGACTGAGGGTGCAAAGAAACCACAGCTGCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR GCA 72 bp AGATCCCTAACAAATCCACTAGAACCCAAGGAAGCCTaGGTGGCACATGGATCTGATGAAAAACAGGCTCCC +
Preference number: 3 (lower is better)
Translates to: RSLTNPLEPKEA*VAHGSDEKQAP
Trigger: GGGAGCCTGTTTTTCATCAGATCCATGTGCCACGCAGGCTTCCTTGGGTTCTAGTGGATTTGTTAGGGATCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR GCA 72 bp TGCTCTTTCCATGTGACCGACAGGGTTTCAACTCGATaGCTTCAACCACGTTCACCATCAACCTTCCAATGC +
Preference number: 3 (lower is better)
Translates to: CSFHVTDRVSTR*LQPRSPSTFQC
Trigger: GCATTGGAAGGTTGATGGTGAACGTGGTTGAAGGCATCGAGTTGAAACCCTGTCGGTCACATGGAAAGAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000420666.1
3UTR CCA 72 bp TTACAGCATAACCCTATGACCAGCACAGCCCCTTCTTaGGCTAAAGGAGATCAGAGTGTGCAGGAGAAGCTA +
Preference number: 3 (lower is better)
Translates to: LQHNPMTSTAPS*AKGDQSVQEKL
Trigger: TAGCTTCTCCTGCACACTCTGATCTCCTTTAGCCCAAGAAGGGGCTGTGCTGGTCATAGGGTTATGCTGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR-3UTR CAA 90 bp GACAGACTCCTTGTTGGCAAGGAGCATTTAATTTCTATGAAATATAGCCCAGGTAAGTGTCTTAGGTCTTaGCCCCGGGATGTGCGGGGC +
Preference number: 3 (lower is better)
Translates to: DRLLVGKEHLISMKYSPGKCLRS*PRDVRG
Trigger: GCCCCGCACATCCCGGGGCAAAGACCTAAGACACTT...ACCTGGGCTATATTTCATAGAAATTAAATGCTCCTTGCCAACAAGGAGTCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR-3UTR CAA 90 bp TTCAACTCGATGCCTTCAACCACGTTCACCATCAACCTTCCAATGCCTGTTGCCTACTGCAGGTTTGATTaGGGGCTGAAGACTTTGTCG +
Preference number: 3 (lower is better)
Translates to: FNSMPSTTFTINLPMPVAYCRFD*GLKTLS
Trigger: CGACAAAGTCTTCAGCCCCAAATCAAACCTGCAGTA...GGCAACAGGCATTGGAAGGTTGATGGTGAACGTGGTTGAAGGCATCGAGTTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381285.8
3UTR GCA 72 bp CACTGGAGCGGGAACCTCATTTTCTGGGATTTTCTCTaGATAGTTTGCAGGGAACCACCCTGTCTTTCCTTT +
Preference number: 3 (lower is better)
Translates to: HWSGNLIFWDFL*IVCREPPCLSF
Trigger: AAAGGAAAGACAGGGTGGTTCCCTGCAAACTATGCAGAGAAAATCCCAGAAAATGAGGTTCCCGCTCCAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379960.9
3UTR CCA 72 bp TTCCAAGTACAAAGAAGCAGGATCCAGAGGAAGCTGTaGGGCGCCATTAAGTTGACCAGCCAATTACTTCCT +
Preference number: 3 (lower is better)
Translates to: FQVQRSRIQRKL*GAIKLTSQLLP
Trigger: AGGAAGTAATTGGCTGGTCAACTTAATGGCGCCCCACAGCTTCCTCTGGATCCTGCTTCTTTGTACTTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR CCA 72 bp GGTTTAGACATTGAGTTTCACAGAATCCTCCTTAGGTaGCCTAAGGGGCACTTCTGGTGGCCAAGTACAGAA +
Preference number: 3 (lower is better)
Translates to: GLDIEFHRILLR*PKGHFWWPSTE
Trigger: TTCTGTACTTGGCCACCAGAAGTGCCCCTTAGGCCACCTAAGGAGGATTCTGTGAAACTCAATGTCTAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR-3UTR CAA 90 bp GTTCAGCCTCCATGGACTTTTGCTTCTGGAGTTGTTGCTTATTGTGTATTTCTCAGTTCCAGTTGTCTTTaGCGCTCTTGCTCCTGGCGC +
Preference number: 3 (lower is better)
Translates to: VQPPWTFASGVVAYCVFLSSSCL*RSCSWR
Trigger: GCGCCAGGAGCAAGAGCGCAAAAGACAACTGGAACT...GAGAAATACACAATAAGCAACAACTCCAGAAGCAAAAGTCCATGGAGGCTGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379960.9
3UTR-3UTR CAA 90 bp TGTTACCCGTTGCATAGGCTTCAGTATAAAACTAGAGAGTGGCATCCCTTTACATCCCCGGACATCTTCTaGCGGACTCTCAGCGCTTTT +
Preference number: 3 (lower is better)
Translates to: CYPLHRLQYKTREWHPFTSPDIF*RTLSAF
Trigger: AAAAGCGCTGAGAGTCCGCAAGAAGATGTCCGGGGA...TGTAAAGGGATGCCACTCTCTAGTTTTATACTGAAGCCTATGCAACGGGTAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381285.8
3UTR-3UTR CAA 90 bp GAAGGAACGGCTATAACGGTGCACATGCTGGAAACTTCCATAGACCAGCTCTTCCTCAAACCAAACAGCTaGGCACATAGTCATAAAGTC +
Preference number: 3 (lower is better)
Translates to: EGTAITVHMLETSIDQLFLKPNS*AHSHKV
Trigger: GACTTTATGACTATGTGCCAAGCTGTTTGGTTTGAG...GAAGAGCTGGTCTATGGAAGTTTCCAGCATGTGCACCGTTATAGCCGTTCCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR TCA 72 bp ACCAGAATCCATGCTTGTAGACTTCCTTATGGGCCCTaGAATGAGTTTCACGTAAGACTTGGGGAACCAACC +
Preference number: 3 (lower is better)
Translates to: TRIHACRLPYGP*NEFHVRLGEPT
Trigger: GGTTGGTTCCCCAAGTCTTACGTGAAACTCATTTCAGGGCCCATAAGGAAGTCTACAAGCATGGATTCTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379960.9
3UTR TCA 72 bp AAGCACAGAACAGGTCACCAGCAACGACTGCTGCTATaGAATATCACAGGCCTCCGAGCCAAAAGAGATTTT +
Preference number: 3 (lower is better)
Translates to: KHRTGHQQRLLL*NITGLRAKRDF
Trigger: AAAATCTCTTTTGGCTCGGAGGCCTGTGATATTTCATAGCAGCAGTCGTTGCTGGTGACCTGTTCTGTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000381318.8
3UTR TCA 72 bp GGCCAGGGTAAAGAGGGTTCCTTTGAATGGAGGAACTaGTTGAGGCTGCATGGAACTAAAGAAGTTATTGGG +
Preference number: 3 (lower is better)
Translates to: GQGKEGSFEWRN*LRLHGTKEVIG
Trigger: CCCAATAACTTCTTTAGTTCCATGCAGCCTCAATCAGTTCCTCCATTCAAAGGAACCCTCTTTACCCTGGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR CCA 72 bp AACCCAGAGATGGACTGTCTAGTGTGTCTTGGTGTCTaGGTTTTAATGCTCCCAAGACAGACAGCTGTTAGA +
Preference number: 3 (lower is better)
Translates to: NPEMDCLVCLGV*VLMLPRQTAVR
Trigger: TCTAACAGCTGTCTGTCTTGGGAGCATTAAAACCCAGACACCAAGACACACTAGACAGTCCATCTCTGGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR-3UTR CAA 90 bp TTCTGTTTCAGTCGTTCAGCCTCCATGGACTTTTGCTTCTGGAGTTGTTGCTTACCACTCAAGTTGTCGTaGCCTTTCAAGTTCCCGTTT +
Preference number: 3 (lower is better)
Translates to: FCFSRSASMDFCFWSCCLPLKLS*PFKFPF
Trigger: AAACGGGAACTTGAAAGGCAACGACAACTTGAGTGG...TAAGCAACAACTCCAGAAGCAAAAGTCCATGGAGGCTGAACGACTGAAACAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379960.9
3UTR TCA 72 bp TTTACATTCATATCCGTGAAAATACTGAAGTGCAACTaGACGAGGAGGAGAGGTCCTCGCTCTCTGCACCAT +
Preference number: 3 (lower is better)
Translates to: FTFISVKILKCN*TRRRGPRSLHH
Trigger: ATGGTGCAGAGAGCGAGGACCTCTCCTCCTCGTTCAGTTGCACTTCAGTATTTTCACGGATATGAATGTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
3UTR GCA 72 bp TCTTTCTCCACTTCATCCAGTTGGTCTCGTAGGTGCTaGCGAGCTAGTTCTTTTGCTTCTAAGGCTCTTTTA +
Preference number: 3 (lower is better)
Translates to: SFSTSSSWSRRC*RASSFASKALL
Trigger: TAAAAGAGCCTTAGAAGCAAAAGAACTAGCTCGGCAGCACCTACGAGACCAACTGGATGAAGTGGAGAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379960.9
3UTR CCA 72 bp TCCAGTTTGGCTTTCATCCACCATGACTATGTCTCCTaGCTGGATAGTGATTTCATCATGGCTTCTGGATTC +
Preference number: 3 (lower is better)
Translates to: SSLAFIHHDYVS*LDSDFIMASGF
Trigger: GAATCCAGAAGCCATGATGAAATCACTATCCAGCCAGGAGACATAGTCATGGTGGATGAAAGCCAAACTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379960.9
3UTR CCA 72 bp TGTCTAAAAGGCTGGGATCAGGATGCCGGGATGCAGTaGCCTAGAGAACTCCTATATTTAGAAAACAAAGAG +
Preference number: 3 (lower is better)
Translates to: CLKGWDQDAGMQ*PRELLYLENKE
Trigger: CTCTTTGTTTTCTAAATATAGGAGTTCTCTAGGCCACTGCATCCCGGCATCCTGATCCCAGCCTTTTAGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR CCA 72 bp AAAACTAATGCTGACACGCTATTAATGAAATGCCCCTaGAGAACACTTGCAGAACTTCCCGTAGTCCGGAAG +
Preference number: 3 (lower is better)
Translates to: KTNADTLLMKCP*RTLAELPVVRK
Trigger: CTTCCGGACTACGGGAAGTTCTGCAAGTGTTCTCCAGGGGCATTTCATTAATAGCGTGTCAGCATTAGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR-3UTR CAA 90 bp TGTCCTACAACAATCAGGATTCAGCACATTCAAGCACAGAACAGGTCACCAGCATCCATTGCCAATCTTTaGACGAACTCCTTGAAGTCT +
Preference number: 3 (lower is better)
Translates to: CPTTIRIQHIQAQNRSPASIANL*TNSLKS
Trigger: AGACTTCAAGGAGTTCGTCAAAAGATTGGCAATGGA...TGCTGGTGACCTGTTCTGTGCTTGAATGTGCTGAATCCTGATTGTTGTAGGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381285.8
3UTR TCA 72 bp TCAGTTCCCAGCAAAGGAGGTACTCTGCCACAACGCTaGTGCTATCATTTAGAAAGCACTTTGATAACCCTA +
Preference number: 3 (lower is better)
Translates to: SVPSKGGTLPQR*CYHLESTLITL
Trigger: TAGGGTTATCAAAGTGCTTTCTAAATGATAGCATCAGCGTTGTGGCAGAGTACCTCCTTTGCTGGGAACTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR TCA 72 bp CCATTTGATCAAGCATTGAACGTCCCTAAAATGAACTaGGTGTCTACGTGCAGGAGGCTGCTAGATCAATGT +
Preference number: 3 (lower is better)
Translates to: PFDQALNVPKMN*VSTCRRLLDQC
Trigger: ACATTGATCTAGCAGCCTCCTGCACGTAGACACTCAGTTCATTTTAGGGACGTTCAATGCTTGATCAAATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR TCA 72 bp AGGGTAAAGAGGGTTCCTTTGAATGGAGGAACTGATTaGGGCTGCATGGAACTAAAGAAGTTATTGGGAGGT +
Preference number: 3 (lower is better)
Translates to: RVKRVPLNGGTD*GCMELKKLLGG
Trigger: ACCTCCCAATAACTTCTTTAGTTCCATGCAGCCTCAATCAGTTCCTCCATTCAAAGGAACCCTCTTTACCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR CCA 72 bp GTTTGGCTTTCATCCACCATGACTATGTCTCCTGGCTaGATAGTGATTTCATCATGGCTTCTGGATTCAAAG +
Preference number: 3 (lower is better)
Translates to: VWLSSTMTMSPG*IVISSWLLDSK
Trigger: CTTTGAATCCAGAAGCCATGATGAAATCACTATCCAGCCAGGAGACATAGTCATGGTGGATGAAAGCCAAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379960.9
3UTR CCA 72 bp AGTAAATACAAGGACACTAATCCAGAACTTGCTACATaGCAGGAGCATCTCAAGGATGCTCAACAGAGTCAC +
Preference number: 3 (lower is better)
Translates to: SKYKDTNPELAT*QEHLKDAQQSH
Trigger: GTGACTCTGTTGAGCATCCTTGAGATGCTCCTGCCATGTAGCAAGTTCTGGATTAGTGTCCTTGTATTTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR-3UTR CAA 90 bp CAACCAGATAAATCTGAGACCGAACAAAAACACAGAGTGCTTTCTCATGTGGCTCACATGCAGCATTCCTaGATAGTGGGTCTTTTTGCA +
Preference number: 3 (lower is better)
Translates to: QPDKSETEQKHRVLSHVAHMQHS*IVGLFA
Trigger: TGCAAAAAGACCCACTATCAAGGAATGCTGCATGTG...AGCCACATGAGAAAGCACTCTGTGTTTTTGTTCGGTCTCAGATTTATCTGGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
3UTR TCA 72 bp TTCATTTTGATTACTTTACATCCCAGGGTTCAAATGTaGACATGCTCCTTCTTCTCCCCAGCACTATCTTCC +
Preference number: 3 (lower is better)
Translates to: FILITLHPRVQM*TCSFFSPALSS
Trigger: GGAAGATAGTGCTGGGGAGAAGAAGGAGCATGTTCACATTTGAACCCTGGGATGTAAAGTAATCAAAATGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456489.1
3UTR GCA 72 bp AACCAGATAAATCTGAGACCGAACAAAAACACAGAGTaGTTTCTCATGTGGCTACAAGGTCACTGTGCAAAA +
Preference number: 3 (lower is better)
Translates to: NQINLRPNKNTE*FLMWLQGHCAK
Trigger: TTTTGCACAGTGACCTTGTAGCCACATGAGAAAGCACTCTGTGTTTTTGTTCGGTCTCAGATTTATCTGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
3UTR GCA 72 bp GAGAACACTTGCAGAACTTCCCGTAGTCCGGAAGATTaGATGACGCATGAAAACAAAGCCATAATTTGTTAT +
Preference number: 3 (lower is better)
Translates to: ENTCRTSRSPED*MTHENKAIICY
Trigger: ATAACAAATTATGGCTTTGTTTTCATGCGTCATGCAATCTTCCGGACTACGGGAAGTTCTGCAAGTGTTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR CCA 72 bp TGTTTCAGTCGTTCAGCCTCCATGGACTTTTGCTTCTaGAGTTGTTGCTTATTGTGTATTTCTCTTAGTTCC +
Preference number: 3 (lower is better)
Translates to: CFSRSASMDFCF*SCCLLCISLSS
Trigger: GGAACTAAGAGAAATACACAATAAGCAACAACTCCAGAAGCAAAAGTCCATGGAGGCTGAACGACTGAAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379960.9
3UTR CCA 72 bp GTTCTTGTTCTTTCTGTTTCAGTCGTTCAGCCTCCATaGACTTTTGCTTCTGGAGTTGTTGCTTATTGTGTA +
Preference number: 3 (lower is better)
Translates to: VLVLSVSVVQPP*TFASGVVAYCV
Trigger: TACACAATAAGCAACAACTCCAGAAGCAAAAGTCCATGGAGGCTGAACGACTGAAACAGAAAGAACAAGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379960.9
3UTR-3UTR CAA 90 bp TGCAATATGATTAGAGCATCGTACAAGGTAATAGCTTTGCCATGGAAAGAACTACACATGCAGCATTCCTaGATAGTGGGTCTTTTTGCA +
Preference number: 3 (lower is better)
Translates to: CNMIRASYKVIALPWKELHMQHS*IVGLFA
Trigger: TGCAAAAAGACCCACTATCAAGGAATGCTGCATGTG...TAGTTCTTTCCATGGCAAAGCTATTACCTTGTACGATGCTCTAATCATATTGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
3UTR-3UTR CAA 90 bp TTTATTGAGAGCTTCCAACTAGTGTTTAAAAGACAAACAGGGCTTCAGCTACAGACGACCTCAGTGGTGTaGTCTACTGATTTTATGCTA +
Preference number: 3 (lower is better)
Translates to: FIESFQLVFKRQTGLQLQTTSVV*STDFML
Trigger: TAGCATAAAATCAGTAGACAACACCACTGAGGTCGT...CTGTAGCTGAAGCCCTGTTTGTCTTTTAAACACTAGTTGGAAGCTCTCAATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
3UTR-3UTR CAA 90 bp GGTTCAAGATACACAGGAAGAGCAATTTGTACTGATGTTGCTACTGGTTTAAAGTGGGACCTAAAACGATaGTTTGTCATTGTGCATACC +
Preference number: 3 (lower is better)
Translates to: GSRYTGRAICTDVATGLKWDLKR*FVIVHT
Trigger: GGTATGCACAATGACAAACAATCGTTTTAGGTCCCA...CTTTAAACCAGTAGCAACATCAGTACAAATTGCTCTTCCTGTGTATCTTGAACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR TCA 72 bp TGTACAGGATGTATTACATGCTCAACAAGGTACAGCTaGTACACACAAACAAGCACAAACACCTTCGCTTTA +
Preference number: 3 (lower is better)
Translates to: CTGCITCSTRYS*YTQTSTNTFAL
Trigger: TAAAGCGAAGGTGTTTGTGCTTGTTTGTGTGTATCAGCTGTACCTTGTTGAGCATGTAATACATCCTGTACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
3UTR CCA 72 bp TTAATTCCAATAATAGGACACTATGAGTGGGTGACCTaGGACCTAAAACGATTGTTTGTCATTGTGCATACC +
Preference number: 3 (lower is better)
Translates to: LIPIIGHYEWVT*DLKRLFVIVHT
Trigger: GGTATGCACAATGACAAACAATCGTTTTAGGTCCCAGGTCACCCACTCATAGTGTCCTATTATTGGAATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR TCA 72 bp TCTCAATTTCTTGCCTTTGGGTGGTCAATCGACATCTaGTATCTTGAAGTTTCCCTTCTAGTTGATGCTTTT +
Preference number: 3 (lower is better)
Translates to: SQFLAFGWSIDI*YLEVSLLVDAF
Trigger: AAAAGCATCAACTAGAAGGGAAACTTCAAGATATCAGATGTCGATTGACCACCCAAAGGCAAGAAATTGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379960.9
3UTR TCA 72 bp TTCTCATGCTACATTAATTCCAATAATAGGACACTATaGGTGGGTGACCTGGGACCTAAAACGATTGTTTGT +
Preference number: 3 (lower is better)
Translates to: FSCYINSNNRTL*VGDLGPKTIVC
Trigger: ACAAACAATCGTTTTAGGTCCCAGGTCACCCACTCATAGTGTCCTATTATTGGAATTAATGTAGCATGAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR CCA 72 bp ATAAAACTTCATGTAACAGAGACTAAAAAGAGACTGTaGATATCGTTGATCGTAACGACCTCAGTGGTGTTG +
Preference number: 3 (lower is better)
Translates to: IKLHVTETKKRL*ISLIVTTSVVL
Trigger: CAACACCACTGAGGTCGTTACGATCAACGATATCCACAGTCTCTTTTTAGTCTCTGTTACATGAAGTTTTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
3UTR CCA 72 bp GAGATAGAGAAGTCTTTTTCTGCTTATACAAGGTACTaGCCTACTCTAAAATATACTCCAAGAGCTTCACCT +
Preference number: 3 (lower is better)
Translates to: EIEKSFSAYTRY*PTLKYTPRASP
Trigger: AGGTGAAGCTCTTGGAGTATATTTTAGAGTAGGCCAGTACCTTGTATAAGCAGAAAAAGACTTCTCTATCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR CCA 72 bp CTGACCAAAAAGTCCACTTCTGAACACAGCTTTATCTaGTGGGCTTTGAATACTAAAATATTCATACTAGGC +
Preference number: 3 (lower is better)
Translates to: LTKKSTSEHSFI*WALNTKIFILG
Trigger: GCCTAGTATGAATATTTTAGTATTCAAAGCCCACCAGATAAAGCTGTGTTCAGAAGTGGACTTTTTGGTCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR CCA 72 bp TCAGGAAACATAGTGAGGATTATTGCTCAATGTATATaGAGATGGGGACCTACTTGCAAAAAGCAAATGGAA +
Preference number: 3 (lower is better)
Translates to: SGNIVRIIAQCI*RWGPTCKKQME
Trigger: TTCCATTTGCTTTTTGCAAGTAGGTCCCCATCTCCATATACATTGAGCAATAATCCTCACTATGTTTCCTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR CCA 72 bp CAGTTGAAGACAGTGAGGATGCATCAGGAAATTTCATaGAAAACGCAAACGCTAATTAGGGATAAACTGAAT +
Preference number: 3 (lower is better)
Translates to: QLKTVRMHQEIS*KTQTLIRDKLN
Trigger: ATTCAGTTTATCCCTAATTAGCGTTTGCGTTTTCCATGAAATTTCCTGATGCATCCTCACTGTCTTCAACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR-3UTR CAA 90 bp GGAATCAGAACTGAATCCACGCAACAATACACCAGTGTGTTTTCATTGACATATCCTCCATACGGACAATaGGTTACATTACAAATTACA +
Preference number: 3 (lower is better)
Translates to: GIRTESTQQYTSVFSLTYPPYGQ*VTLQIT
Trigger: TGTAATTTGTAATGTAACCAATTGTCCGTATGGAGG...ATATGTCAATGAAAACACACTGGTGTATTGTTGCGTGGATTCAGTTCTGATTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR GCA 72 bp GAACTTCTGGAAGAAGAAAATACGCATTCTTACCACTaGCTAAAAAGAAACCTTAGTTTCTGGTTAATCCTC +
Preference number: 3 (lower is better)
Translates to: ELLEEENTHSYH*LKRNLSFWLIL
Trigger: GAGGATTAACCAGAAACTAAGGTTTCTTTTTAGGCAGTGGTAAGAATGCGTATTTTCTTCTTCCAGAAGTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR GCA 72 bp ATATTTTTAATGATCAGTGGGTATCTTGTTACCCGTTaGATAGGCTTCAGTATAAAACTAGAGAGTGGCATC +
Preference number: 3 (lower is better)
Translates to: IFLMISGYLVTR*IGFSIKLESGI
Trigger: GATGCCACTCTCTAGTTTTATACTGAAGCCTATGCAACGGGTAACAAGATACCCACTGATCATTAAAAATAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381285.8
3UTR TCA 72 bp ACTCCAGTACCAACAGAACATGCAAAGGACATTTCATaGCCACAACAAACTAGGATTATGAGAATATTAACA +
Preference number: 3 (lower is better)
Translates to: TPVPTEHAKDIS*PQQTRIMRILT
Trigger: TGTTAATATTCTCATAATCCTAGTTTGTTGTGGTCATGAAATGTCCTTTGCATGTTCTGTTGGTACTGGAGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR TCA 72 bp ATTGTTTGTCATTGTGCATACCATACGCTACCTACATaGACAATGATGTCCAACATTAACACGCAAATAAAG +
Preference number: 3 (lower is better)
Translates to: IVCHCAYHTLPT*TMMSNINTQIK
Trigger: CTTTATTTGCGTGTTAATGTTGGACATCATTGTTCATGTAGGTAGCGTATGGTATGCACAATGACAAACAAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR TCA 72 bp TGCCTGAAGTTAAACTTGGTCTCTAACATGTTCAGTTaGAAGTTTCTAACTACAGGGTATATTTGCTTGTTT +
Preference number: 3 (lower is better)
Translates to: CLKLNLVSNMFS*KFLTTGYICLF
Trigger: AAACAAGCAAATATACCCTGTAGTTAGAAACTTTCAACTGAACATGTTAGAGACCAAGTTTAACTTCAGGCA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CCA 90 bp GCCCGTCCAGCTGCCGCCCAGCTTCTAGGAGGGTGGCCTGGACCAGGATGGGGAGGAAGCCCAGCTTCATaGTCAGCTGCCTCCCGGGGC +
Preference number: 4 (lower is better)
Translates to: ARPAAAQLLGGWPGPGWGGSPAS*SAASRG
Trigger: GCCCCGGGAGGCAGCTGACCATGAAGCTGGGCTTCC...TCCCCATCCTGGTCCAGGCCACCCTCCTAGAAGCTGGGCGGCAGCTGGACGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR TCA 90 bp CTTAACTGGCCGGCACTTGGAACGGTGAGAGAGGGCTGGGCTGCCCATGCATCCCGGCACTTGGAACGGTaGGAGAGGGCTGGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: LNWPALGTVREGWAAHASRHLER*ERAGLP
Trigger: GGGCAGCCCAGCCCTCTCTCACCGTTCCAAGTGCCG...GGATGCATGGGCAGCCCAGCCCTCTCTCACCGTTCCAAGTGCCGGCCAGTTAAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379960.9
ENST00000419241.1
3UTR CAA 72 bp AGCAAGGTCTCACTGGAGACCCCTGGCGCGCTAGGCTaGAACCCTAGGCTCGCCGCGAGCTTCCTTCCCACC +
Preference number: 4 (lower is better)
Translates to: SKVSLETPGALG*NPRLAASFLPT
Trigger: GGTGGGAAGGAAGCTCGCGGCGAGCCTAGGGTTCAAGCCTAGCGCGCCAGGGGTCTCCAGTGAGACCTTGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR TCA 90 bp AGCCTCTCCGAAGCAGGTTCCTCCCAGACACCCGCAGACCAGATCGTGTGGCCCTCTCCTGGAATGGGCTaGCCTGTGGGTCCCCCAGGA +
Preference number: 4 (lower is better)
Translates to: SLSEAGSSQTPADQIVWPSPGMG*PVGPPG
Trigger: TCCTGGGGGACCCACAGGTCAGCCCATTCCAGGAGA...GGGCCACACGATCTGGTCTGCGGGTGTCTGGGAGGAACCTGCTTCGGAGAGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR GCA 90 bp CTTAACTGGCCGGCACTTGGAACGGTGAGAGAGGGCTGGGCTGCCCATGCATCCTGGGCCAGGCGCTCCTaGTCCTTGCGCTGCTGTTCC +
Preference number: 4 (lower is better)
Translates to: LNWPALGTVREGWAAHASWARRS*SLRCCS
Trigger: GGAACAGCAGCGCAAGGAGCAGGAGCGCCTGGCCCA...GGATGCATGGGCAGCCCAGCCCTCTCTCACCGTTCCAAGTGCCGGCCAGTTAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379960.9
CDS-3UTR TCA 90 bp CTGCACCATGTGAAAGGAGAAGGACCTCTACACGACCACCAGCACAGCCTCCCGCGGCACTTGGAACGGTaGGAGAGGGCTGGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: LHHVKGEGPLHDHQHSLPRHLER*ERAGLP
Trigger: GGGCAGCCCAGCCCTCTCTCACCGTTCCAAGTGCCG...CGGGAGGCTGTGCTGGTGGTCGTGTAGAGGTCCTTCTCCTTTCACATGGTGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR TCA 90 bp GGGCACTTCTGGTGGCCAAGTACAGAAAGTCTGTGCCCCAGAAGCAGCCTGGACTCAGGGCAGCCCCGTTaGGCTGGCGGCTGCAGAAGC +
Preference number: 4 (lower is better)
Translates to: GHFWWPSTESLCPRSSLDSGQPR*AGGCRS
Trigger: GCTTCTGCAGCCGCCAGCTCAACGGGGCTGCCCTGA...GTCCAGGCTGCTTCTGGGGCACAGACTTTCTGTACTTGGCCACCAGAAGTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR TCA 90 bp TACAATTTCCAGACAGCATGTGTGGCCGTGGGCTGGGACCCTGCTGAGCACACCTCAGGGCAGCCCCGTTaGGCTGGCGGCTGCAGAAGC +
Preference number: 4 (lower is better)
Translates to: YNFQTACVAVGWDPAEHTSGQPR*AGGCRS
Trigger: GCTTCTGCAGCCGCCAGCTCAACGGGGCTGCCCTGA...GGTGTGCTCAGCAGGGTCCCAGCCCACGGCCACACATGCTGTCTGGAAATTGTA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR TCA 90 bp AAGGGGCTAGACTCCCAGCTGCACCCTGTTGAGGGCTATGGGATTTCAGCGACCCTGCTGAGCACACCCTaGGCCCGCTGCCTACGGCTC +
Preference number: 4 (lower is better)
Translates to: KGLDSQLHPVEGYGISATLLSTP*ARCLRL
Trigger: GAGCCGTAGGCAGCGGGCTCAGGGTGTGCTCAGCAG...GGTCGCTGAAATCCCATAGCCCTCAACAGGGTGCAGCTGGGAGTCTAGCCCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR GCA 90 bp CAGCCAGAGGGCATCGTTCTAAGGAAGGAGAGTCAGGGCCTGTTTGGGGTTGGTCGGGCGGGTCCGCGCTaGCGCCCCAGGGACAAATCA +
Preference number: 4 (lower is better)
Translates to: QPEGIVLRKESQGLFGVGRAGPR*RPRDKS
Trigger: TGATTTGTCCCTGGGGCGGCAGCGCGGACCCGCCCG...ACCAACCCCAAACAGGCCCTGACTCTCCTTCCTTAGAACGATGCCCTCTGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR GCA 90 bp AAGGGGCTAGACTCCCAGCTGCACCCTGTTGAGGGCTATGGGATTTCAGCGACCGGAGCCCAGAGCTCCTaGCACCACCGGCAACCCCCT +
Preference number: 4 (lower is better)
Translates to: KGLDSQLHPVEGYGISATGAQSS*HHRQPP
Trigger: AGGGGGTTGCCGGTGGTGGCAGGAGCTCTGGGCTCC...GGTCGCTGAAATCCCATAGCCCTCAACAGGGTGCAGCTGGGAGTCTAGCCCCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CCA 90 bp GTGCTGGTGGGCCACGTGGAGCTGAAGTCGGCCCAGTTATTAGGGGTCGTGGAGGCCAGTGGCCGTGGCTaGAGTAAAGGCGGACCTCTG +
Preference number: 4 (lower is better)
Translates to: VLVGHVELKSAQLLGVVEASGRG*SKGGPL
Trigger: CAGAGGTCCGCCTTTACTCCAGCCACGGCCACTGGC...CTCCACGACCCCTAATAACTGGGCCGACTTCAGCTCCACGTGGCCCACCAGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379960.9
ENST00000419241.1
CDS-3UTR CCA 90 bp GCCCGTCCAGCTGCCGCCCAGCTTCTAGGAGGGTGGCCTGGACCAGGATGGGGAGGGTTCAGAGTGTCCTaGATCGTCTTGGTGATGTGG +
Preference number: 4 (lower is better)
Translates to: ARPAAAQLLGGWPGPGWGGFRVS*IVLVMW
Trigger: CCACATCACCAAGACGATCCAGGACACTCTGAACCC...TCCCCATCCTGGTCCAGGCCACCCTCCTAGAAGCTGGGCGGCAGCTGGACGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CCA 90 bp GCCCGTCCAGCTGCCGCCCAGCTTCTAGGAGGGTGGCCTGGACCAGGATGGGGAATCCAGAGGAAGCTGTaGGGCGCCATTAAGTTGACC +
Preference number: 4 (lower is better)
Translates to: ARPAAAQLLGGWPGPGWGIQRKL*GAIKLT
Trigger: GGTCAACTTAATGGCGCCCCACAGCTTCCTCTGGAT...TCCCCATCCTGGTCCAGGCCACCCTCCTAGAAGCTGGGCGGCAGCTGGACGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CCA 90 bp GGCACTTGGAACGGTGAGAGAGGGCTGGGCTGCCCATGCATCCCAGTTATCCGTGCCGAGGGCGCAGCATaGGCAAAAGCCTCGAGGTGG +
Preference number: 4 (lower is better)
Translates to: GTWNGERGLGCPCIPVIRAEGAA*AKASRW
Trigger: CCACCTCGAGGCTTTTGCCCATGCTGCGCCCTCGGC...ACGGATAACTGGGATGCATGGGCAGCCCAGCCCTCTCTCACCGTTCCAAGTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419241.1
CDS-3UTR TCA 90 bp GCCCGTCCAGCTGCCGCCCAGCTTCTAGGAGGGTGGCCTGGACCAGGATGGGGACAACGACTGCTGCTATaGAATATCACAGGCCTCCGA +
Preference number: 4 (lower is better)
Translates to: ARPAAAQLLGGWPGPGWGQRLLL*NITGLR
Trigger: TCGGAGGCCTGTGATATTTCATAGCAGCAGTCGTTG...TCCCCATCCTGGTCCAGGCCACCCTCCTAGAAGCTGGGCGGCAGCTGGACGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR GCA 90 bp TACAATTTCCAGACAGCATGTGTGGCCGTGGGCTGGGACCCTGCTGAGCACACCCCAGGGACAAATCAGTaGCGCTCACGCGCCGCTGGG +
Preference number: 4 (lower is better)
Translates to: YNFQTACVAVGWDPAEHTPGTNQ*RSRAAG
Trigger: CCCAGCGGCGCGTGAGCGGCACTGATTTGTCCCTGG...GGTGTGCTCAGCAGGGTCCCAGCCCACGGCCACACATGCTGTCTGGAAATTGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR GCA 90 bp GTGCTGGTGGGCCACGTGGAGCTGAAGTCGGCCCAGTTATTAGGGGTCGTGGAGTGCAGTGGACCAGGGTaGCTGGACAGCTGGCTTAGC +
Preference number: 4 (lower is better)
Translates to: VLVGHVELKSAQLLGVVECSGPG*LDSWLS
Trigger: GCTAAGCCAGCTGTCCAGGCACCCTGGTCCACTGCA...CTCCACGACCCCTAATAACTGGGCCGACTTCAGCTCCACGTGGCCCACCAGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379960.9
ENST00000419241.1
CDS-3UTR CCA 90 bp GTGCTGGTGGGCCACGTGGAGCTGAAGTCGGCCCAGTTATTAGGGGTCGTGGAGAGCCCACTCTGCCACTaGTGGGACACTGGCCACATC +
Preference number: 4 (lower is better)
Translates to: VLVGHVELKSAQLLGVVESPLCH*WDTGHI
Trigger: GATGTGGCCAGTGTCCCACCAGTGGCAGAGTGGGCT...CTCCACGACCCCTAATAACTGGGCCGACTTCAGCTCCACGTGGCCCACCAGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379960.9
CDS-3UTR CCA 90 bp CTTAACTGGCCGGCACTTGGAACGGTGAGAGAGGGCTGGGCTGCCCATGCATCCGTGGACCAGGGTGCCTaGACAGCTGGCTTAGCTGGT +
Preference number: 4 (lower is better)
Translates to: LNWPALGTVREGWAAHASVDQGA*TAGLAG
Trigger: ACCAGCTAAGCCAGCTGTCCAGGCACCCTGGTCCAC...GGATGCATGGGCAGCCCAGCCCTCTCTCACCGTTCCAAGTGCCGGCCAGTTAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379960.9
ENST00000419241.1
CDS-3UTR CCA 90 bp CGTGCTGGTGGGCCACGTGGAGCTGAAGTCGGCCCAGTTATTAGGGGTCGTGGAGTGGACCAGGGTGCCTaGACAGCTGGCTTAGCTGGT +
Preference number: 4 (lower is better)
Translates to: RAGGPRGAEVGPVIRGRGVDQGA*TAGLAG
Trigger: ACCAGCTAAGCCAGCTGTCCAGGCACCCTGGTCCAC...TCCACGACCCCTAATAACTGGGCCGACTTCAGCTCCACGTGGCCCACCAGCACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379960.9
ENST00000419241.1
CDS-3UTR CCA 90 bp GGGCACTTCTGGTGGCCAAGTACAGAAAGTCTGTGCCCCAGAAGCAGCCTGGACTGTGTGGCCGTGGGCTaGGACCCTGCTGAGCACACC +
Preference number: 4 (lower is better)
Translates to: GHFWWPSTESLCPRSSLDCVAVG*DPAEHT
Trigger: GGTGTGCTCAGCAGGGTCCCAGCCCACGGCCACACA...GTCCAGGCTGCTTCTGGGGCACAGACTTTCTGTACTTGGCCACCAGAAGTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CCA 90 bp TACAATTTCCAGACAGCATGTGTGGCCGTGGGCTGGGACCCTGCTGAGCACACCTGTGTGGCCGTGGGCTaGGACCCTGCTGAGCACACC +
Preference number: 4 (lower is better)
Translates to: YNFQTACVAVGWDPAEHTCVAVG*DPAEHT
Trigger: GGTGTGCTCAGCAGGGTCCCAGCCCACGGCCACACA...GGTGTGCTCAGCAGGGTCCCAGCCCACGGCCACACATGCTGTCTGGAAATTGTA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR TCA 90 bp CGTGCTGGTGGGCCACGTGGAGCTGAAGTCGGCCCAGTTATTAGGGGTCGTGGAGGTCGTGGAGGGCTCTaGAGAGGTTACTGCCAAAGG +
Preference number: 4 (lower is better)
Translates to: RAGGPRGAEVGPVIRGRGGRGGL*RGYCQR
Trigger: CCTTTGGCAGTAACCTCTTCAGAGCCCTCCACGACC...TCCACGACCCCTAATAACTGGGCCGACTTCAGCTCCACGTGGCCCACCAGCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379960.9
ENST00000419241.1
CDS-3UTR TCA 90 bp GTGCTGGTGGGCCACGTGGAGCTGAAGTCGGCCCAGTTATTAGGGGTCGTGGAGGGTCGTGGAGGGCTCTaGAGAGGTTACTGCCAAAGG +
Preference number: 4 (lower is better)
Translates to: VLVGHVELKSAQLLGVVEGRGGL*RGYCQR
Trigger: CCTTTGGCAGTAACCTCTTCAGAGCCCTCCACGACC...CTCCACGACCCCTAATAACTGGGCCGACTTCAGCTCCACGTGGCCCACCAGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379960.9
ENST00000419241.1
CDS-3UTR TCA 90 bp CGTAACTGGACCTTTGGAGCCCTGGTCTTTCTTGATGTCCGCCACACGGATCTCTCAGGGCAGCCCCGTTaGGCTGGCGGCTGCAGAAGC +
Preference number: 4 (lower is better)
Translates to: RNWTFGALVFLDVRHTDLSGQPR*AGGCRS
Trigger: GCTTCTGCAGCCGCCAGCTCAACGGGGCTGCCCTGA...GAGATCCGTGTGGCGGACATCAAGAAAGACCAGGGCTCCAAAGGTCCAGTTACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381285.8
CDS-3UTR TCA 90 bp AGCCTCTCCGAAGCAGGTTCCTCCCAGACACCCGCAGACCAGATCGTGTGGCCCACCCCAAAGGCTTCGTaGTCTGAGTCAGCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: SLSEAGSSQTPADQIVWPTPKAS*SESAGG
Trigger: TCCTCCTGCTGACTCAGATCACGAAGCCTTTGGGGT...GGGCCACACGATCTGGTCTGCGGGTGTCTGGGAGGAACCTGCTTCGGAGAGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR GCA 90 bp ACTGAAGTGCAACTGAACGAGGAGGAGAGGTCCTCGCTCTCTGCACCATGTGAACGGGCGGGTCCGCGCTaGCGCCCCAGGGACAAATCA +
Preference number: 4 (lower is better)
Translates to: TEVQLNEEERSSLSAPCERAGPR*RPRDKS
Trigger: TGATTTGTCCCTGGGGCGGCAGCGCGGACCCGCCCG...TTCACATGGTGCAGAGAGCGAGGACCTCTCCTCCTCGTTCAGTTGCACTTCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR GCA 90 bp AAAAGGAATACAATTTCCAGACAGCATGTGTGGCCGTGGGCTGGGACCCTGCTGCGGGCGGGTCCGCGCTaGCGCCCCAGGGACAAATCA +
Preference number: 4 (lower is better)
Translates to: KRNTISRQHVWPWAGTLLRAGPR*RPRDKS
Trigger: TGATTTGTCCCTGGGGCGGCAGCGCGGACCCGCCCG...CAGCAGGGTCCCAGCCCACGGCCACACATGCTGTCTGGAAATTGTATTCCTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR GCA 90 bp CAGCCAGAGGGCATCGTTCTAAGGAAGGAGAGTCAGGGCCTGTTTGGGGTTGGTTGGGCCAGGCGCTCCTaGTCCTTGCGCTGCTGTTCC +
Preference number: 4 (lower is better)
Translates to: QPEGIVLRKESQGLFGVGWARRS*SLRCCS
Trigger: GGAACAGCAGCGCAAGGAGCAGGAGCGCCTGGCCCA...ACCAACCCCAAACAGGCCCTGACTCTCCTTCCTTAGAACGATGCCCTCTGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR GCA 90 bp GGCTCTGAAGAGGTTACTGCCAAAGGGGCGGGGGTCTCACGCAAGGCCAGTTTGCTCTCCTCCTCTCTCTaGCGTTCTAGCTCCCGCTGC +
Preference number: 4 (lower is better)
Translates to: GSEEVTAKGAGVSRKASLLSSSL*RSSSRC
Trigger: GCAGCGGGAGCTAGAACGGCAGAGAGAGGAGGAGAG...CAAACTGGCCTTGCGTGAGACCCCCGCCCCTTTGGCAGTAACCTCTTCAGAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379960.9
CDS-3UTR GCA 90 bp GCCCGTCCAGCTGCCGCCCAGCTTCTAGGAGGGTGGCCTGGACCAGGATGGGGAAGTTGGTCTCGTAGGTaGTGCCGAGCTAGTTCTTTT +
Preference number: 4 (lower is better)
Translates to: ARPAAAQLLGGWPGPGWGSWSRR*CRASSF
Trigger: AAAAGAACTAGCTCGGCAGCACCTACGAGACCAACT...TCCCCATCCTGGTCCAGGCCACCCTCCTAGAAGCTGGGCGGCAGCTGGACGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR GCA 90 bp AAGGGGCTAGACTCCCAGCTGCACCCTGTTGAGGGCTATGGGATTTCAGCGACCTGTATCCGCGCAGCTTaGCACAGCCTGCCGGGAGAC +
Preference number: 4 (lower is better)
Translates to: KGLDSQLHPVEGYGISATCIRAA*HSLPGD
Trigger: GTCTCCCGGCAGGCTGTGGCAAGCTGCGCGGATACA...GGTCGCTGAAATCCCATAGCCCTCAACAGGGTGCAGCTGGGAGTCTAGCCCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CCA 90 bp AGCCTCTCCGAAGCAGGTTCCTCCCAGACACCCGCAGACCAGATCGTGTGGCCCCCACTCTGCCACTGGTaGGACACTGGCCACATCAAA +
Preference number: 4 (lower is better)
Translates to: SLSEAGSSQTPADQIVWPPLCHW*DTGHIK
Trigger: TTTGATGTGGCCAGTGTCCCACCAGTGGCAGAGTGG...GGGCCACACGATCTGGTCTGCGGGTGTCTGGGAGGAACCTGCTTCGGAGAGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CCA 90 bp CGTGCTGGTGGGCCACGTGGAGCTGAAGTCGGCCCAGTTATTAGGGGTCGTGGATGGAGGCAGGACAGGTaGCAGTGGTTGGCCAGACAT +
Preference number: 4 (lower is better)
Translates to: RAGGPRGAEVGPVIRGRGWRQDR*QWLARH
Trigger: ATGTCTGGCCAACCACTGCCACCTGTCCTGCCTCCA...TCCACGACCCCTAATAACTGGGCCGACTTCAGCTCCACGTGGCCCACCAGCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379960.9
CDS-3UTR CCA 90 bp CTGAAGAGGTTACTGCCAAAGGGGCGGGGGTCTCACGCAAGGCCAGTTTGGGGGGACCTCTGCCTTAACTaGCCGGCACTTGGAACGGTG +
Preference number: 4 (lower is better)
Translates to: LKRLLPKGRGSHARPVWGDLCLN*PALGTV
Trigger: CACCGTTCCAAGTGCCGGCCAGTTAAGGCAGAGGTC...CCCCCAAACTGGCCTTGCGTGAGACCCCCGCCCCTTTGGCAGTAACCTCTTCAG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000379960.9
ENST00000419241.1
CDS-3UTR CCA 90 bp TACAATTTCCAGACAGCATGTGTGGCCGTGGGCTGGGACCCTGCTGAGCACACCTCCAGACAGCATGTGTaGCCGTGGGCTGGGACCCTG +
Preference number: 4 (lower is better)
Translates to: YNFQTACVAVGWDPAEHTSRQHV*PWAGTL
Trigger: CAGGGTCCCAGCCCACGGCCACACATGCTGTCTGGA...GGTGTGCTCAGCAGGGTCCCAGCCCACGGCCACACATGCTGTCTGGAAATTGTA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CCA 90 bp AGCCTCTCCGAAGCAGGTTCCTCCCAGACACCCGCAGACCAGATCGTGTGGCCCCCCCAGAACCTAGGCTaGCCTAGCAATCCTCATCTG +
Preference number: 4 (lower is better)
Translates to: SLSEAGSSQTPADQIVWPPQNLG*PSNPHL
Trigger: CAGATGAGGATTGCTAGGCCAGCCTAGGTTCTGGGG...GGGCCACACGATCTGGTCTGCGGGTGTCTGGGAGGAACCTGCTTCGGAGAGGCT
61% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CCA 90 bp AAGGGGCTAGACTCCCAGCTGCACCCTGTTGAGGGCTATGGGATTTCAGCGACCCCTGGGTGTGCTGCCTaGCAGCCACAAGGGGCTATG +
Preference number: 4 (lower is better)
Translates to: KGLDSQLHPVEGYGISATPGCAA*QPQGAM
Trigger: CATAGCCCCTTGTGGCTGCCAGGCAGCACACCCAGG...GGTCGCTGAAATCCCATAGCCCTCAACAGGGTGCAGCTGGGAGTCTAGCCCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CCA 90 bp AGCCTCTCCGAAGCAGGTTCCTCCCAGACACCCGCAGACCAGATCGTGTGGCCCGTAGAAAGGGCGACCTaGAAGTCAGAGAGTGGCCTC +
Preference number: 4 (lower is better)
Translates to: SLSEAGSSQTPADQIVWPVERAT*KSESGL
Trigger: GAGGCCACTCTCTGACTTCCAGGTCGCCCTTTCTAC...GGGCCACACGATCTGGTCTGCGGGTGTCTGGGAGGAACCTGCTTCGGAGAGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR TCA 90 bp AAAGCTGATGCAGAAAGGGTGGGAAGCCTGAGGACCTCCGTGCAGCCCCAGCCTCCAGCTGCACCCTGTTaGGGGCTATGGGATTTCAGC +
Preference number: 4 (lower is better)
Translates to: KADAERVGSLRTSVQPQPPAAPC*GLWDFS
Trigger: GCTGAAATCCCATAGCCCTCAACAGGGTGCAGCTGG...AGGCTGGGGCTGCACGGAGGTCCTCAGGCTTCCCACCCTTTCTGCATCAGCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR TCA 90 bp GCCCGTCCAGCTGCCGCCCAGCTTCTAGGAGGGTGGCCTGGACCAGGATGGGGAACTCTGCCACAACGCTaGTGCTATCATTTAGAAAGC +
Preference number: 4 (lower is better)
Translates to: ARPAAAQLLGGWPGPGWGTLPQR*CYHLES
Trigger: GCTTTCTAAATGATAGCATCAGCGTTGTGGCAGAGT...TCCCCATCCTGGTCCAGGCCACCCTCCTAGAAGCTGGGCGGCAGCTGGACGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR GCA 90 bp GGTTGCTCTTTCCATGTGACCGACAGGGTTTCAACTCGATGCCTTCAACCACGTCGGGCGGGTCCGCGCTaGCGCCCCAGGGACAAATCA +
Preference number: 4 (lower is better)
Translates to: GCSFHVTDRVSTRCLQPRRAGPR*RPRDKS
Trigger: TGATTTGTCCCTGGGGCGGCAGCGCGGACCCGCCCG...ACGTGGTTGAAGGCATCGAGTTGAAACCCTGTCGGTCACATGGAAAGAGCAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381285.8
CDS-3UTR GCA 90 bp AAAGCTGATGCAGAAAGGGTGGGAAGCCTGAGGACCTCCGTGCAGCCCCAGCCTTGTCTTTTGCGCTCTTaGTCCTGGCGCTCACGCTCC +
Preference number: 4 (lower is better)
Translates to: KADAERVGSLRTSVQPQPCLLRS*SWRSRS
Trigger: GGAGCGTGAGCGCCAGGAGCAAGAGCGCAAAAGACA...AGGCTGGGGCTGCACGGAGGTCCTCAGGCTTCCCACCCTTTCTGCATCAGCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR GCA 90 bp GCCCGTCCAGCTGCCGCCCAGCTTCTAGGAGGGTGGCCTGGACCAGGATGGGGAGTGCTCTCAATTTCTTaGCTTTGGGTGGTCAATCGA +
Preference number: 4 (lower is better)
Translates to: ARPAAAQLLGGWPGPGWGVLSIS*LWVVNR
Trigger: TCGATTGACCACCCAAAGGCAAGAAATTGAGAGCAC...TCCCCATCCTGGTCCAGGCCACCCTCCTAGAAGCTGGGCGGCAGCTGGACGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR GCA 90 bp TACAATTTCCAGACAGCATGTGTGGCCGTGGGCTGGGACCCTGCTGAGCACACCTGCTCGTCCTCCTGCTaGACATGCTCCAGCCACTGC +
Preference number: 4 (lower is better)
Translates to: YNFQTACVAVGWDPAEHTCSSSC*TCSSHC
Trigger: GCAGTGGCTGGAGCATGTGCAGCAGGAGGACGAGCA...GGTGTGCTCAGCAGGGTCCCAGCCCACGGCCACACATGCTGTCTGGAAATTGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR GCA 90 bp GCTCTGAAGAGGTTACTGCCAAAGGGGCGGGGGTCTCACGCAAGGCCAGTTTGGCTGGTTTCTCATTCGTaGTGGTGGGCCACGTGGAGC +
Preference number: 4 (lower is better)
Translates to: ALKRLLPKGRGSHARPVWLVSHS*WWATWS
Trigger: GCTCCACGTGGCCCACCAGCACGAATGAGAAACCAG...CCAAACTGGCCTTGCGTGAGACCCCCGCCCCTTTGGCAGTAACCTCTTCAGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379960.9
ENST00000419241.1
CDS-3UTR GCA 90 bp GGCACTTGGAACGGTGAGAGAGGGCTGGGCTGCCCATGCATCCCAGTTATCCGTAACGACCGGCTTGGCTaGTGGAGAGGCTACTCGCTT +
Preference number: 4 (lower is better)
Translates to: GTWNGERGLGCPCIPVIRNDRLG*WRGYSL
Trigger: AAGCGAGTAGCCTCTCCAGCAGCCAAGCCGGTCGTT...ACGGATAACTGGGATGCATGGGCAGCCCAGCCCTCTCTCACCGTTCCAAGTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379960.9
CDS-3UTR GCA 90 bp GCCCGTCCAGCTGCCGCCCAGCTTCTAGGAGGGTGGCCTGGACCAGGATGGGGAACACCGAGGATCCATTaGCAATCTTTTGACGAACTC +
Preference number: 4 (lower is better)
Translates to: ARPAAAQLLGGWPGPGWGTPRIH*QSFDEL
Trigger: GAGTTCGTCAAAAGATTGGCAATGGATCCTCGGTGT...TCCCCATCCTGGTCCAGGCCACCCTCCTAGAAGCTGGGCGGCAGCTGGACGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR GCA 90 bp TACAATTTCCAGACAGCATGTGTGGCCGTGGGCTGGGACCCTGCTGAGCACACCGCCTTCTCCAGGGCGTaGTTCAAGTGGCTGTGGTCC +
Preference number: 4 (lower is better)
Translates to: YNFQTACVAVGWDPAEHTAFSRA*FKWLWS
Trigger: GGACCACAGCCACTTGAAGCACGCCCTGGAGAAGGC...GGTGTGCTCAGCAGGGTCCCAGCCCACGGCCACACATGCTGTCTGGAAATTGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR GCA 90 bp AAGGGGCTAGACTCCCAGCTGCACCCTGTTGAGGGCTATGGGATTTCAGCGACCGTGAGGGAAGCAACATaGCACCAGCACTGTGGCCCG +
Preference number: 4 (lower is better)
Translates to: KGLDSQLHPVEGYGISATVREAT*HQHCGP
Trigger: CGGGCCACAGTGCTGGTGGCATGTTGCTTCCCTCAC...GGTCGCTGAAATCCCATAGCCCTCAACAGGGTGCAGCTGGGAGTCTAGCCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CCA 90 bp GGAAGAGAAGCACAATCCGGGGCTGCATGTGGCCTAGTCTCATGGAGGGGTGGACACGCAAGGCCAGTTTaGGGGCAGGGGCAGATGTTG +
Preference number: 4 (lower is better)
Translates to: GREAQSGAACGLVSWRGGHARPV*GQGQML
Trigger: CAACATCTGCCCCTGCCCCCAAACTGGCCTTGCGTG...TCCACCCCTCCATGAGACTAGGCCACATGCAGCCCCGGATTGTGCTTCTCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000419241.1
CDS-3UTR CCA 90 bp TTCCAGTTGTCTTTTGCGCTCTTGCTCCTGGCGCTCACGCTCCTTCCTCTCCTGACGGTGAGAGAGGGCTaGGCTGCCCATGCATCCCAG +
Preference number: 4 (lower is better)
Translates to: FQLSFALLLLALTLLPLLTVREG*AAHASQ
Trigger: CTGGGATGCATGGGCAGCCCAGCCCTCTCTCACCGT...CAGGAGAGGAAGGAGCGTGAGCGCCAGGAGCAAGAGCGCAAAAGACAACTGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379960.9
CDS-3UTR CCA 90 bp CACCATGTGAAAGGAGAAGGACCTCTACACGACCACCAGCACAGCCTCCCGACAACGGTGAGAGAGGGCTaGGCTGCCCATGCATCCCAG +
Preference number: 4 (lower is better)
Translates to: HHVKGEGPLHDHQHSLPTTVREG*AAHASQ
Trigger: CTGGGATGCATGGGCAGCCCAGCCCTCTCTCACCGT...TGTCGGGAGGCTGTGCTGGTGGTCGTGTAGAGGTCCTTCTCCTTTCACATGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CCA 90 bp GTCCCTCTCGAACACAGTGATGCAGAGGACTTCCTGCTCCAGGTCTCGGATGAACAGCATGTGTGGCCGTaGGCTGGGACCCTGCTGAGC +
Preference number: 4 (lower is better)
Translates to: VPLEHSDAEDFLLQVSDEQHVWP*AGTLLS
Trigger: GCTCAGCAGGGTCCCAGCCCACGGCCACACATGCTG...TTCATCCGAGACCTGGAGCAGGAAGTCCTCTGCATCACTGTGTTCGAGAGGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381285.8
CDS-3UTR CCA 90 bp TACAATTTCCAGACAGCATGTGTGGCCGTGGGCTGGGACCCTGCTGAGCACACCCTCATGAATCACAGCTaGGTCCGAGGGCCAGCCCGA +
Preference number: 4 (lower is better)
Translates to: YNFQTACVAVGWDPAEHTLMNHS*VRGPAR
Trigger: TCGGGCTGGCCCTCGGACCCAGCTGTGATTCATGAG...GGTGTGCTCAGCAGGGTCCCAGCCCACGGCCACACATGCTGTCTGGAAATTGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CCA 90 bp TACAATTTCCAGACAGCATGTGTGGCCGTGGGCTGGGACCCTGCTGAGCACACCGAATGGGCTGACCTGTaGGTCCCCCAGGAGGAAGCT +
Preference number: 4 (lower is better)
Translates to: YNFQTACVAVGWDPAEHTEWADL*VPQEEA
Trigger: AGCTTCCTCCTGGGGGACCCACAGGTCAGCCCATTC...GGTGTGCTCAGCAGGGTCCCAGCCCACGGCCACACATGCTGTCTGGAAATTGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CCA 90 bp CAGCCAGAGGGCATCGTTCTAAGGAAGGAGAGTCAGGGCCTGTTTGGGGTTGGTGCAGGCACATGGCAGTaGCAGGGGATGCAAACGGGC +
Preference number: 4 (lower is better)
Translates to: QPEGIVLRKESQGLFGVGAGTWQ*QGMQTG
Trigger: GCCCGTTTGCATCCCCTGCCACTGCCATGTGCCTGC...ACCAACCCCAAACAGGCCCTGACTCTCCTTCCTTAGAACGATGCCCTCTGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CCA 90 bp AAGGGGCTAGACTCCCAGCTGCACCCTGTTGAGGGCTATGGGATTTCAGCGACCCTGCTTGACGCCCTGTaGCCCATCCTGAACTGGGAG +
Preference number: 4 (lower is better)
Translates to: KGLDSQLHPVEGYGISATLLDAL*PILNWE
Trigger: CTCCCAGTTCAGGATGGGCCACAGGGCGTCAAGCAG...GGTCGCTGAAATCCCATAGCCCTCAACAGGGTGCAGCTGGGAGTCTAGCCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CCA 90 bp TGCAGGGGGTCCGGGAAGAGAAGCACAATCCGGGGCTGCATGTGGCCTAGTCTCTGTGGCCTAGTCTCATaGAGGGGTGGAGGAGGAAGT +
Preference number: 4 (lower is better)
Translates to: CRGSGKRSTIRGCMWPSLCGLVS*RGGGGS
Trigger: ACTTCCTCCTCCACCCCTCCATGAGACTAGGCCACA...GAGACTAGGCCACATGCAGCCCCGGATTGTGCTTCTCTTCCCGGACCCCCTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000419241.1
CDS-3UTR TCA 90 bp TACAATTTCCAGACAGCATGTGTGGCCGTGGGCTGGGACCCTGCTGAGCACACCCCTGGATCGTCTTGGTaGTGTGGCACTGGGAACCCA +
Preference number: 4 (lower is better)
Translates to: YNFQTACVAVGWDPAEHTPGSSW*CGTGNP
Trigger: TGGGTTCCCAGTGCCACATCACCAAGACGATCCAGG...GGTGTGCTCAGCAGGGTCCCAGCCCACGGCCACACATGCTGTCTGGAAATTGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR TCA 90 bp AACTCGATGCCTTCAACCACGTTCACCATCAACCTTCCAATGCCTGTTGCCCTTGGGCTGGGACCCTGCTaGGCACACCCTGAGCCCGCT +
Preference number: 4 (lower is better)
Translates to: NSMPSTTFTINLPMPVALGLGPC*AHPEPA
Trigger: AGCGGGCTCAGGGTGTGCTCAGCAGGGTCCCAGCCC...AAGGGCAACAGGCATTGGAAGGTTGATGGTGAACGTGGTTGAAGGCATCGAGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381285.8
CDS-3UTR TCA 90 bp TACAATTTCCAGACAGCATGTGTGGCCGTGGGCTGGGACCCTGCTGAGCACACCCCAGCTGCACCCTGTTaGGGGCTATGGGATTTCAGC +
Preference number: 4 (lower is better)
Translates to: YNFQTACVAVGWDPAEHTPAAPC*GLWDFS
Trigger: GCTGAAATCCCATAGCCCTCAACAGGGTGCAGCTGG...GGTGTGCTCAGCAGGGTCCCAGCCCACGGCCACACATGCTGTCTGGAAATTGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR TCA 90 bp AGCCTCTCCGAAGCAGGTTCCTCCCAGACACCCGCAGACCAGATCGTGTGGCCCGTTCTCAGGGAAGACTaGGGGTTACAGCATAACCCT +
Preference number: 4 (lower is better)
Translates to: SLSEAGSSQTPADQIVWPVLRED*GLQHNP
Trigger: AGGGTTATGCTGTAACCCTCAGTCTTCCCTGAGAAC...GGGCCACACGATCTGGTCTGCGGGTGTCTGGGAGGAACCTGCTTCGGAGAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR TCA 90 bp GGGCACTTCTGGTGGCCAAGTACAGAAAGTCTGTGCCCCAGAAGCAGCCTGGACCTTGGGGTACAGCTGTaGACTAGGGGCTCGGTTCCA +
Preference number: 4 (lower is better)
Translates to: GHFWWPSTESLCPRSSLDLGVQL*TRGSVP
Trigger: TGGAACCGAGCCCCTAGTTCACAGCTGTACCCCAAG...GTCCAGGCTGCTTCTGGGGCACAGACTTTCTGTACTTGGCCACCAGAAGTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR TCA 90 bp AAAAGGAATACAATTTCCAGACAGCATGTGTGGCCGTGGGCTGGGACCCTGCTGCCCTGTGGCCCATCCTaGACTGGGAGCCCAGAGCTC +
Preference number: 4 (lower is better)
Translates to: KRNTISRQHVWPWAGTLLPCGPS*TGSPEL
Trigger: GAGCTCTGGGCTCCCAGTTCAGGATGGGCCACAGGG...CAGCAGGGTCCCAGCCCACGGCCACACATGCTGTCTGGAAATTGTATTCCTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR TCA 90 bp GGGTCCGGGAAGAGAAGCACAATCCGGGGCTGCATGTGGCCTAGTCTCATGGAGTCCACCCATTCCCCATaGCTATGTCTCCTGGCTGGA +
Preference number: 4 (lower is better)
Translates to: GSGKRSTIRGCMWPSLMESTHSP*LCLLAG
Trigger: TCCAGCCAGGAGACATAGTCATGGGGAATGGGTGGA...CTCCATGAGACTAGGCCACATGCAGCCCCGGATTGTGCTTCTCTTCCCGGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419241.1
CDS-3UTR GCA 90 bp ACTGAAGTGCAACTGAACGAGGAGGAGAGGTCCTCGCTCTCTGCACCATGTGAACCAGGGACAAATCAGTaGCGCTCACGCGCCGCTGGG +
Preference number: 4 (lower is better)
Translates to: TEVQLNEEERSSLSAPCEPGTNQ*RSRAAG
Trigger: CCCAGCGGCGCGTGAGCGGCACTGATTTGTCCCTGG...TTCACATGGTGCAGAGAGCGAGGACCTCTCCTCCTCGTTCAGTTGCACTTCAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR GCA 90 bp TACAATTTCCAGACAGCATGTGTGGCCGTGGGCTGGGACCCTGCTGAGCACACCTCCTGCTCCTTGCGCTaGTGTTCCAGGAGAGCTTGC +
Preference number: 4 (lower is better)
Translates to: YNFQTACVAVGWDPAEHTSCSLR*CSRRAC
Trigger: GCAAGCTCTCCTGGAACAGCAGCGCAAGGAGCAGGA...GGTGTGCTCAGCAGGGTCCCAGCCCACGGCCACACATGCTGTCTGGAAATTGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR GCA 90 bp CTGAAGAGGTTACTGCCAAAGGGGCGGGGGTCTCACGCAAGGCCAGTTTGGGGGGTTCCAGTTGTCTTTTaGGCTCTTGCTCCTGGCGCT +
Preference number: 4 (lower is better)
Translates to: LKRLLPKGRGSHARPVWGVPVVF*ALAPGA
Trigger: AGCGCCAGGAGCAAGAGCGCAAAAGACAACTGGAAC...CCCCCAAACTGGCCTTGCGTGAGACCCCCGCCCCTTTGGCAGTAACCTCTTCAG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000379960.9
CDS-3UTR GCA 90 bp TTCTCCAGGGCGTGCTTCAAGTGGCTGTGGTCCGGGTGGTTTTCAGGGGTGTTTTGCAGTGGACCAGGGTaGCTGGACAGCTGGCTTAGC +
Preference number: 4 (lower is better)
Translates to: FSRACFKWLWSGWFSGVFCSGPG*LDSWLS
Trigger: GCTAAGCCAGCTGTCCAGGCACCCTGGTCCACTGCA...AAACACCCCTGAAAACCACCCGGACCACAGCCACTTGAAGCACGCCCTGGAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381285.8
CDS-3UTR GCA 90 bp AAGGGGCTAGACTCCCAGCTGCACCCTGTTGAGGGCTATGGGATTTCAGCGACCCTGGTTTCTCATTCGTaGTGGTGGGCCACGTGGAGC +
Preference number: 4 (lower is better)
Translates to: KGLDSQLHPVEGYGISATLVSHS*WWATWS
Trigger: GCTCCACGTGGCCCACCAGCACGAATGAGAAACCAG...GGTCGCTGAAATCCCATAGCCCTCAACAGGGTGCAGCTGGGAGTCTAGCCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR GCA 90 bp AAGGGGCTAGACTCCCAGCTGCACCCTGTTGAGGGCTATGGGATTTCAGCGACCAACGACCGGCTTGGCTaGTGGAGAGGCTACTCGCTT +
Preference number: 4 (lower is better)
Translates to: KGLDSQLHPVEGYGISATNDRLG*WRGYSL
Trigger: AAGCGAGTAGCCTCTCCAGCAGCCAAGCCGGTCGTT...GGTCGCTGAAATCCCATAGCCCTCAACAGGGTGCAGCTGGGAGTCTAGCCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR GCA 90 bp GGGCACTTCTGGTGGCCAAGTACAGAAAGTCTGTGCCCCAGAAGCAGCCTGGACAGAGCTAGAGGGAGCTaGCCCGTGAATGGCAGCTGT +
Preference number: 4 (lower is better)
Translates to: GHFWWPSTESLCPRSSLDRARGS*PVNGSC
Trigger: ACAGCTGCCATTCACGGGGCAGCTCCCTCTAGCTCT...GTCCAGGCTGCTTCTGGGGCACAGACTTTCTGTACTTGGCCACCAGAAGTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR GCA 90 bp CAGCCAGAGGGCATCGTTCTAAGGAAGGAGAGTCAGGGCCTGTTTGGGGTTGGTGGAAGCTGCAGGGAATaGATCCCTTGGCCCCCAGGA +
Preference number: 4 (lower is better)
Translates to: QPEGIVLRKESQGLFGVGGSCRE*IPWPPG
Trigger: TCCTGGGGGCCAAGGGATGCATTCCCTGCAGCTTCC...ACCAACCCCAAACAGGCCCTGACTCTCCTTCCTTAGAACGATGCCCTCTGGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR GCA 90 bp CTGCACCATGTGAAAGGAGAAGGACCTCTACACGACCACCAGCACAGCCTCCCGAGGACAGCTAGATTGTaGTTGAGGCTCCCCCTGCCC +
Preference number: 4 (lower is better)
Translates to: LHHVKGEGPLHDHQHSLPRTARL*LRLPLP
Trigger: GGGCAGGGGGAGCCTCAAGCACAATCTAGCTGTCCT...CGGGAGGCTGTGCTGGTGGTCGTGTAGAGGTCCTTCTCCTTTCACATGGTGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CCA 90 bp CACCATGTGAAAGGAGAAGGACCTCTACACGACCACCAGCACAGCCTCCCGACACTACGCTCCCTCCCCTaGCGCCTCCACTCTTCTCTA +
Preference number: 4 (lower is better)
Translates to: HHVKGEGPLHDHQHSLPTLRSLP*RLHSSL
Trigger: TAGAGAAGAGTGGAGGCGCCAGGGGAGGGAGCGTAG...TGTCGGGAGGCTGTGCTGGTGGTCGTGTAGAGGTCCTTCTCCTTTCACATGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CCA 90 bp TACAATTTCCAGACAGCATGTGTGGCCGTGGGCTGGGACCCTGCTGAGCACACCTGGAGGCAGGACAGGTaGCAGTGGTTGGCCAGACAT +
Preference number: 4 (lower is better)
Translates to: YNFQTACVAVGWDPAEHTWRQDR*QWLARH
Trigger: ATGTCTGGCCAACCACTGCCACCTGTCCTGCCTCCA...GGTGTGCTCAGCAGGGTCCCAGCCCACGGCCACACATGCTGTCTGGAAATTGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CCA 90 bp CTGCACCATGTGAAAGGAGAAGGACCTCTACACGACCACCAGCACAGCCTCCCGGGGTGCCTGGACAGCTaGCTTAGCTGGTTCTTGGTG +
Preference number: 4 (lower is better)
Translates to: LHHVKGEGPLHDHQHSLPGCLDS*LSWFLV
Trigger: CACCAAGAACCAGCTAAGCCAGCTGTCCAGGCACCC...CGGGAGGCTGTGCTGGTGGTCGTGTAGAGGTCCTTCTCCTTTCACATGGTGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CCA 90 bp CACCATGTGAAAGGAGAAGGACCTCTACACGACCACCAGCACAGCCTCCCGACAGTGGACCAGGGTGCCTaGACAGCTGGCTTAGCTGGT +
Preference number: 4 (lower is better)
Translates to: HHVKGEGPLHDHQHSLPTVDQGA*TAGLAG
Trigger: ACCAGCTAAGCCAGCTGTCCAGGCACCCTGGTCCAC...TGTCGGGAGGCTGTGCTGGTGGTCGTGTAGAGGTCCTTCTCCTTTCACATGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CCA 90 bp CTGCCCATGCATCCCAGTTATCCGTTTCTGGTTTCTCATTCGTGCTGGTGGGCCGCCAGTGGCCGTGGCTaGAGTAAAGGCGGACCTCTG +
Preference number: 4 (lower is better)
Translates to: LPMHPSYPFLVSHSCWWAASGRG*SKGGPL
Trigger: CAGAGGTCCGCCTTTACTCCAGCCACGGCCACTGGC...GGCCCACCAGCACGAATGAGAAACCAGAAACGGATAACTGGGATGCATGGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379960.9
ENST00000419241.1
CDS-3UTR CCA 90 bp AAGGGGCTAGACTCCCAGCTGCACCCTGTTGAGGGCTATGGGATTTCAGCGACCTCCACCTTTTCACCCTaGCCTAGCACAGGAGACGGG +
Preference number: 4 (lower is better)
Translates to: KGLDSQLHPVEGYGISATSTFSP*PSTGDG
Trigger: CCCGTCTCCTGTGCTAGGCCAGGGTGAAAAGGTGGA...GGTCGCTGAAATCCCATAGCCCTCAACAGGGTGCAGCTGGGAGTCTAGCCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CCA 90 bp CTGCACCATGTGAAAGGAGAAGGACCTCTACACGACCACCAGCACAGCCTCCCGTCCACCTTTTCACCCTaGCCTAGCACAGGAGACGGG +
Preference number: 4 (lower is better)
Translates to: LHHVKGEGPLHDHQHSLPSTFSP*PSTGDG
Trigger: CCCGTCTCCTGTGCTAGGCCAGGGTGAAAAGGTGGA...CGGGAGGCTGTGCTGGTGGTCGTGTAGAGGTCCTTCTCCTTTCACATGGTGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CCA 90 bp TACAATTTCCAGACAGCATGTGTGGCCGTGGGCTGGGACCCTGCTGAGCACACCTCATCCGTCTTCTGCTaGATCAGGGCAGCCCCGTTG +
Preference number: 4 (lower is better)
Translates to: YNFQTACVAVGWDPAEHTSSVFC*IRAAPL
Trigger: CAACGGGGCTGCCCTGATCCAGCAGAAGACGGATGA...GGTGTGCTCAGCAGGGTCCCAGCCCACGGCCACACATGCTGTCTGGAAATTGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CCA 90 bp AAGGGGCTAGACTCCCAGCTGCACCCTGTTGAGGGCTATGGGATTTCAGCGACCATGCCACCAGCACTGTaGCCCGCTTGTCACTGGAAG +
Preference number: 4 (lower is better)
Translates to: KGLDSQLHPVEGYGISATMPPAL*PACHWK
Trigger: CTTCCAGTGACAAGCGGGCCACAGTGCTGGTGGCAT...GGTCGCTGAAATCCCATAGCCCTCAACAGGGTGCAGCTGGGAGTCTAGCCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CCA 90 bp ATCCGTTTCTGGTTTCTCATTCGTGCTGGTGGGCCACGTGGAGCTGAAGTCGGCAGGAGGAAGTCAGGCTaGCCTAGCACAGGAGACGGG +
Preference number: 4 (lower is better)
Translates to: IRFWFLIRAGGPRGAEVGRRKSG*PSTGDG
Trigger: CCCGTCTCCTGTGCTAGGCCAGCCTGACTTCCTCCT...GCCGACTTCAGCTCCACGTGGCCCACCAGCACGAATGAGAAACCAGAAACGGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419241.1
CDS-3UTR TCA 90 bp TACAATTTCCAGACAGCATGTGTGGCCGTGGGCTGGGACCCTGCTGAGCACACCCTGGTTGCTGTTTCATaGCAGGGGGAAGTGCAGAGG +
Preference number: 4 (lower is better)
Translates to: YNFQTACVAVGWDPAEHTLVAVS*QGEVQR
Trigger: CCTCTGCACTTCCCCCTGTCATGAAACAGCAACCAG...GGTGTGCTCAGCAGGGTCCCAGCCCACGGCCACACATGCTGTCTGGAAATTGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR TCA 90 bp AAAGCTGATGCAGAAAGGGTGGGAAGCCTGAGGACCTCCGTGCAGCCCCAGCCTTTCAGTCTTGATGACTaGGGAACAGCCCACTCTGCC +
Preference number: 4 (lower is better)
Translates to: KADAERVGSLRTSVQPQPFSLDD*GTAHSA
Trigger: GGCAGAGTGGGCTGTTCCTCAGTCATCAAGACTGAA...AGGCTGGGGCTGCACGGAGGTCCTCAGGCTTCCCACCCTTTCTGCATCAGCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR TCA 90 bp CTGCACCATGTGAAAGGAGAAGGACCTCTACACGACCACCAGCACAGCCTCCCGGCTGGTTCTTGGTGTTaGTGGAAAAGCCGACCCAGC +
Preference number: 4 (lower is better)
Translates to: LHHVKGEGPLHDHQHSLPAGSWC*WKSRPS
Trigger: GCTGGGTCGGCTTTTCCATCAACACCAAGAACCAGC...CGGGAGGCTGTGCTGGTGGTCGTGTAGAGGTCCTTCTCCTTTCACATGGTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR TCA 90 bp GCTCTGAAGAGGTTACTGCCAAAGGGGCGGGGGTCTCACGCAAGGCCAGTTTGGGGCAGGGGCAGATGTTaGATCAGTCACTGGTTTCAC +
Preference number: 4 (lower is better)
Translates to: ALKRLLPKGRGSHARPVWGRGRC*ISHWFH
Trigger: GTGAAACCAGTGACTGATTCAACATCTGCCCCTGCC...CCAAACTGGCCTTGCGTGAGACCCCCGCCCCTTTGGCAGTAACCTCTTCAGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000379960.9
ENST00000419241.1
CDS-3UTR TCA 90 bp CCTTTGGGAACGGACCAGGTACGCTTTCTCGCGCTTCTTTTTCTCAGTCTCTATCGGCACTTGGAACGGTaGGAGAGGGCTGGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: PLGTDQVRFLALLFLSLYRHLER*ERAGLP
Trigger: GGGCAGCCCAGCCCTCTCTCACCGTTCCAAGTGCCG...ATAGAGACTGAGAAAAAGAAGCGCGAGAAAGCGTACCTGGTCCGTTCCCAAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381285.8
CDS-3UTR TCA 90 bp GTTGACCAGCCAATTACTTCCTCCGTGTCAGGTCTAACCAGAAGAGGTCTGCATCGGCACTTGGAACGGTaGGAGAGGGCTGGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: VDQPITSSVSGLTRRGLHRHLER*ERAGLP
Trigger: GGGCAGCCCAGCCCTCTCTCACCGTTCCAAGTGCCG...ATGCAGACCTCTTCTGGTTAGACCTGACACGGAGGAAGTAATTGGCTGGTCAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR TCA 90 bp GAAGGAACGGCTATAACGGTGCACATGCTGGAAACTTCCATAGACCAGCTCTTCCTGCTGAGCACACCCTaGGCCCGCTGCCTACGGCTC +
Preference number: 4 (lower is better)
Translates to: EGTAITVHMLETSIDQLFLLSTP*ARCLRL
Trigger: GAGCCGTAGGCAGCGGGCTCAGGGTGTGCTCAGCAG...GAAGAGCTGGTCTATGGAAGTTTCCAGCATGTGCACCGTTATAGCCGTTCCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000381318.8
CDS-3UTR TCA 90 bp CTTATGGTGGCTCAGACTATACTGTCTGAGGGCTTCATCATGCTACCGGTTTCTGGGCTGGGACCCTGCTaGGCACACCCTGAGCCCGCT +
Preference number: 4 (lower is better)
Translates to: LMVAQTILSEGFIMLPVSGLGPC*AHPEPA
Trigger: AGCGGGCTCAGGGTGTGCTCAGCAGGGTCCCAGCCC...AGAAACCGGTAGCATGATGAAGCCCTCAGACAGTATAGTCTGAGCCACCATAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR GCA 90 bp GAAACGACCGGCTTGGCTGCTGGAGAGGCTACTCGCTTTAGACTAGCAGGACTCTCCTGCTCCTTGCGCTaGTGTTCCAGGAGAGCTTGC +
Preference number: 4 (lower is better)
Translates to: ETTGLAAGEATRFRLAGLSCSLR*CSRRAC
Trigger: GCAAGCTCTCCTGGAACAGCAGCGCAAGGAGCAGGA...GAGTCCTGCTAGTCTAAAGCGAGTAGCCTCTCCAGCAGCCAAGCCGGTCGTTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379960.9
CDS-3UTR GCA 90 bp AAAGCTGATGCAGAAAGGGTGGGAAGCCTGAGGACCTCCGTGCAGCCCCAGCCTGTTCCAGTTGTCTTTTaGGCTCTTGCTCCTGGCGCT +
Preference number: 4 (lower is better)
Translates to: KADAERVGSLRTSVQPQPVPVVF*ALAPGA
Trigger: AGCGCCAGGAGCAAGAGCGCAAAAGACAACTGGAAC...AGGCTGGGGCTGCACGGAGGTCCTCAGGCTTCCCACCCTTTCTGCATCAGCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR GCA 90 bp GGACCTTTGGAGCCCTGGTCTTTCTTGATGTCCGCCACACGGATCTCCGTCCGAGTAAAGGCGGACCTCTaGCTTAACTGGCCGGCACTT +
Preference number: 4 (lower is better)
Translates to: GPLEPWSFLMSATRISVRVKADL*LNWPAL
Trigger: AAGTGCCGGCCAGTTAAGGCAGAGGTCCGCCTTTAC...TCGGACGGAGATCCGTGTGGCGGACATCAAGAAAGACCAGGGCTCCAAAGGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381285.8
CDS-3UTR GCA 90 bp GCCCAGTTATTAGGGGTCGTGGAGGGCTCTGAAGAGGTTACTGCCAAAGGGGCGGTAAAGGCGGACCTCTaGCTTAACTGGCCGGCACTT +
Preference number: 4 (lower is better)
Translates to: AQLLGVVEGSEEVTAKGAVKADL*LNWPAL
Trigger: AAGTGCCGGCCAGTTAAGGCAGAGGTCCGCCTTTAC...CGCCCCTTTGGCAGTAACCTCTTCAGAGCCCTCCACGACCCCTAATAACTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379960.9
ENST00000419241.1
CDS-3UTR GCA 90 bp AAAGCTGATGCAGAAAGGGTGGGAAGCCTGAGGACCTCCGTGCAGCCCCAGCCTCCCCGGACATCTTCTTaGGGACTCTCAGCGCTTTTA +
Preference number: 4 (lower is better)
Translates to: KADAERVGSLRTSVQPQPPRTSS*GLSALL
Trigger: TAAAAGCGCTGAGAGTCCGCAAGAAGATGTCCGGGG...AGGCTGGGGCTGCACGGAGGTCCTCAGGCTTCCCACCCTTTCTGCATCAGCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR GCA 90 bp AAAGCTGATGCAGAAAGGGTGGGAAGCCTGAGGACCTCCGTGCAGCCCCAGCCTCACTGTGCAGAAATTTaGGCGGCCCCAAGCAATTGG +
Preference number: 4 (lower is better)
Translates to: KADAERVGSLRTSVQPQPHCAEI*AAPSNW
Trigger: CCAATTGCTTGGGGCCGCGCAAATTTCTGCACAGTG...AGGCTGGGGCTGCACGGAGGTCCTCAGGCTTCCCACCCTTTCTGCATCAGCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR GCA 90 bp GGGCACTTCTGGTGGCCAAGTACAGAAAGTCTGTGCCCCAGAAGCAGCCTGGACCCTTCCAATGCCTGTTaGCCTTTGGGAACGGACCAG +
Preference number: 4 (lower is better)
Translates to: GHFWWPSTESLCPRSSLDPSNAC*PLGTDQ
Trigger: CTGGTCCGTTCCCAAAGGGCAACAGGCATTGGAAGG...GTCCAGGCTGCTTCTGGGGCACAGACTTTCTGTACTTGGCCACCAGAAGTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR GCA 90 bp TACAATTTCCAGACAGCATGTGTGGCCGTGGGCTGGGACCCTGCTGAGCACACCCTTGGAAGGCAGACCTaGAAGTGTCCTTCCCTGCTG +
Preference number: 4 (lower is better)
Translates to: YNFQTACVAVGWDPAEHTLGRQT*KCPSLL
Trigger: CAGCAGGGAAGGACACTTGCAGGTCTGCCTTCCAAG...GGTGTGCTCAGCAGGGTCCCAGCCCACGGCCACACATGCTGTCTGGAAATTGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR GCA 90 bp TACAATTTCCAGACAGCATGTGTGGCCGTGGGCTGGGACCCTGCTGAGCACACCCCCCTGGAGAACACTTaGAGAACTTCCCGTAGTCCG +
Preference number: 4 (lower is better)
Translates to: YNFQTACVAVGWDPAEHTPLENT*RTSRSP
Trigger: CGGACTACGGGAAGTTCTGCAAGTGTTCTCCAGGGG...GGTGTGCTCAGCAGGGTCCCAGCCCACGGCCACACATGCTGTCTGGAAATTGTA
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CCA 90 bp CAAACAACTGCAGGTCCAAGCGGACCACAATCTCTCCCGTGGGGACTTCGTGCATGGAGGCAGGACAGGTaGCAGTGGTTGGCCAGACAT +
Preference number: 4 (lower is better)
Translates to: QTTAGPSGPQSLPWGLRAWRQDR*QWLARH
Trigger: ATGTCTGGCCAACCACTGCCACCTGTCCTGCCTCCA...TGCACGAAGTCCCCACGGGAGAGATTGTGGTCCGCTTGGACCTGCAGTTGTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381285.8
CDS-3UTR CCA 90 bp ACTGAAGTGCAACTGAACGAGGAGGAGAGGTCCTCGCTCTCTGCACCATGTGAAACGGTGAGAGAGGGCTaGGCTGCCCATGCATCCCAG +
Preference number: 4 (lower is better)
Translates to: TEVQLNEEERSSLSAPCETVREG*AAHASQ
Trigger: CTGGGATGCATGGGCAGCCCAGCCCTCTCTCACCGT...TTCACATGGTGCAGAGAGCGAGGACCTCTCCTCCTCGTTCAGTTGCACTTCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CCA 90 bp ACTGAAGTGCAACTGAACGAGGAGGAGAGGTCCTCGCTCTCTGCACCATGTGAAGCCAGTGGCCGTGGCTaGAGTAAAGGCGGACCTCTG +
Preference number: 4 (lower is better)
Translates to: TEVQLNEEERSSLSAPCEASGRG*SKGGPL
Trigger: CAGAGGTCCGCCTTTACTCCAGCCACGGCCACTGGC...TTCACATGGTGCAGAGAGCGAGGACCTCTCCTCCTCGTTCAGTTGCACTTCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CCA 90 bp ATTGTTTCGGGGCAGGGAGGATTGTCGAGAATGATTCCTAGGAGCTTTGAGGGGGCAGCCCCGTTGAGCTaGCGGCTGCAGAAGCGGATG +
Preference number: 4 (lower is better)
Translates to: IVSGQGGLSRMIPRSFEGAAPLS*RLQKRM
Trigger: CATCCGCTTCTGCAGCCGCCAGCTCAACGGGGCTGC...CCCCTCAAAGCTCCTAGGAATCATTCTCGACAATCCTCCCTGCCCCGAAACAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CCA 90 bp AGCCTCTCCGAAGCAGGTTCCTCCCAGACACCCGCAGACCAGATCGTGTGGCCCGATTCTAGAACATCCTaGTTCTGTGTGGTCAGTGGC +
Preference number: 4 (lower is better)
Translates to: SLSEAGSSQTPADQIVWPDSRTS*FCVVSG
Trigger: GCCACTGACCACACAGAACCAGGATGTTCTAGAATC...GGGCCACACGATCTGGTCTGCGGGTGTCTGGGAGGAACCTGCTTCGGAGAGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CCA 90 bp TACAATTTCCAGACAGCATGTGTGGCCGTGGGCTGGGACCCTGCTGAGCACACCCAGGCAAAGGCTATCTaGGAGGGTTCGCTAGCACTC +
Preference number: 4 (lower is better)
Translates to: YNFQTACVAVGWDPAEHTQAKAI*EGSLAL
Trigger: GAGTGCTAGCGAACCCTCCCAGATAGCCTTTGCCTG...GGTGTGCTCAGCAGGGTCCCAGCCCACGGCCACACATGCTGTCTGGAAATTGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR TCA 90 bp TACAATTTCCAGACAGCATGTGTGGCCGTGGGCTGGGACCCTGCTGAGCACACCTTCAGTCTTGATGACTaGGGAACAGCCCACTCTGCC +
Preference number: 4 (lower is better)
Translates to: YNFQTACVAVGWDPAEHTFSLDD*GTAHSA
Trigger: GGCAGAGTGGGCTGTTCCTCAGTCATCAAGACTGAA...GGTGTGCTCAGCAGGGTCCCAGCCCACGGCCACACATGCTGTCTGGAAATTGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR TCA 90 bp CACCATGTGAAAGGAGAAGGACCTCTACACGACCACCAGCACAGCCTCCCGACACAAGGATATAGGGCTTaGGCTTGTAGCCCCTCCACC +
Preference number: 4 (lower is better)
Translates to: HHVKGEGPLHDHQHSLPTQGYRA*ACSPST
Trigger: GGTGGAGGGGCTACAAGCTCAAGCCCTATATCCTTG...TGTCGGGAGGCTGTGCTGGTGGTCGTGTAGAGGTCCTTCTCCTTTCACATGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR TCA 90 bp TACAATTTCCAGACAGCATGTGTGGCCGTGGGCTGGGACCCTGCTGAGCACACCAGAGGCCCAATGGTTTaGGACTCCATGCATCACCCA +
Preference number: 4 (lower is better)
Translates to: YNFQTACVAVGWDPAEHTRGPMV*DSMHHP
Trigger: TGGGTGATGCATGGAGTCTCAAACCATTGGGCCTCT...GGTGTGCTCAGCAGGGTCCCAGCCCACGGCCACACATGCTGTCTGGAAATTGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR TCA 90 bp ACGCTATTAATGAAATGCCCCTGGAGAACACTTGCAGAACTTCCCGTAGTCCGGCTCCACCCCCGCCGGTaGCAGTGCACAGAATGGCAG +
Preference number: 4 (lower is better)
Translates to: TLLMKCPWRTLAELPVVRLHPRR*QCTEWQ
Trigger: CTGCCATTCTGTGCACTGTCACCGGCGGGGGTGGAG...CCGGACTACGGGAAGTTCTGCAAGTGTTCTCCAGGGGCATTTCATTAATAGCGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR TCA 90 bp GCTTTGAGGGGCCTGTCTTTGCCATCCCATATCCCTGTGACTGAATACCAAATGAAAGGGTGGGAAGCCTaGGGACCTCCGTGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: ALRGLSLPSHIPVTEYQMKGWEA*GPPCSP
Trigger: GGGGCTGCACGGAGGTCCTCAGGCTTCCCACCCTTT...CATTTGGTATTCAGTCACAGGGATATGGGATGGCAAAGACAGGCCCCTCAAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR TCA 90 bp AAGGGGCTAGACTCCCAGCTGCACCCTGTTGAGGGCTATGGGATTTCAGCGACCGGCTTTCATCCACCATaGCTATGTCTCCTGGCTGGA +
Preference number: 4 (lower is better)
Translates to: KGLDSQLHPVEGYGISATGFHPP*LCLLAG
Trigger: TCCAGCCAGGAGACATAGTCATGGTGGATGAAAGCC...GGTCGCTGAAATCCCATAGCCCTCAACAGGGTGCAGCTGGGAGTCTAGCCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000399367.7
CDS-3UTR GCA 90 bp AACTCGATGCCTTCAACCACGTTCACCATCAACCTTCCAATGCCTGTTGCCCTTCCAGGGACAAATCAGTaGCGCTCACGCGCCGCTGGG +
Preference number: 4 (lower is better)
Translates to: NSMPSTTFTINLPMPVALPGTNQ*RSRAAG
Trigger: CCCAGCGGCGCGTGAGCGGCACTGATTTGTCCCTGG...AAGGGCAACAGGCATTGGAAGGTTGATGGTGAACGTGGTTGAAGGCATCGAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381285.8
CDS-3UTR GCA 90 bp AACAGGGCTTCAGCTACAGCATATCTAACACACAAACGGACCATGAGCTCCATTCGGGCGGGTCCGCGCTaGCGCCCCAGGGACAAATCA +
Preference number: 4 (lower is better)
Translates to: NRASATAYLTHKRTMSSIRAGPR*RPRDKS
Trigger: TGATTTGTCCCTGGGGCGGCAGCGCGGACCCGCCCG...AATGGAGCTCATGGTCCGTTTGTGTGTTAGATATGCTGTAGCTGAAGCCCTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR GCA 90 bp AGCCAAAAGAGATTTTTCCAACATGGCTGCCAACCGAGACCCAGTGACCCAACATGGGCCAGGCGCTCCTaGTCCTTGCGCTGCTGTTCC +
Preference number: 4 (lower is better)
Translates to: SQKRFFQHGCQPRPSDPTWARRS*SLRCCS
Trigger: GGAACAGCAGCGCAAGGAGCAGGAGCGCCTGGCCCA...TGTTGGGTCACTGGGTCTCGGTTGGCAGCCATGTTGGAAAAATCTCTTTTGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000381318.8
CDS-3UTR GCA 90 bp GTCCTGGATCGTCTTGGTGATGTGGCACTGGGAACCCATGGTCACCTCACAGTATGTCTTTTGCGCTCTTaGTCCTGGCGCTCACGCTCC +
Preference number: 4 (lower is better)
Translates to: VLDRLGDVALGTHGHLTVCLLRS*SWRSRS
Trigger: GGAGCGTGAGCGCCAGGAGCAAGAGCGCAAAAGACA...TACTGTGAGGTGACCATGGGTTCCCAGTGCCACATCACCAAGACGATCCAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381285.8
CDS-3UTR GCA 90 bp GGGCACTTCTGGTGGCCAAGTACAGAAAGTCTGTGCCCCAGAAGCAGCCTGGACCGTTCTAGCTCCCGCTaGTTTTCCAGTTGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: GHFWWPSTESLCPRSSLDRSSSR*FSSCFS
Trigger: GGAGAAGCAACTGGAAAAGCAGCGGGAGCTAGAACG...GTCCAGGCTGCTTCTGGGGCACAGACTTTCTGTACTTGGCCACCAGAAGTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR GCA 90 bp TACAATTTCCAGACAGCATGTGTGGCCGTGGGCTGGGACCCTGCTGAGCACACCCGTTCTAGCTCCCGCTaGTTTTCCAGTTGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: YNFQTACVAVGWDPAEHTRSSSR*FSSCFS
Trigger: GGAGAAGCAACTGGAAAAGCAGCGGGAGCTAGAACG...GGTGTGCTCAGCAGGGTCCCAGCCCACGGCCACACATGCTGTCTGGAAATTGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR GCA 90 bp ACTGAAGTGCAACTGAACGAGGAGGAGAGGTCCTCGCTCTCTGCACCATGTGAATGCAGTGGACCAGGGTaGCTGGACAGCTGGCTTAGC +
Preference number: 4 (lower is better)
Translates to: TEVQLNEEERSSLSAPCECSGPG*LDSWLS
Trigger: GCTAAGCCAGCTGTCCAGGCACCCTGGTCCACTGCA...TTCACATGGTGCAGAGAGCGAGGACCTCTCCTCCTCGTTCAGTTGCACTTCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR GCA 90 bp GTTCACCATCAACCTTCCAATGCCTGTTGCCCTTTGGGAACGGACCAGGTACGCCTGGTTTCTCATTCGTaGTGGTGGGCCACGTGGAGC +
Preference number: 4 (lower is better)
Translates to: VHHQPSNACCPLGTDQVRLVSHS*WWATWS
Trigger: GCTCCACGTGGCCCACCAGCACGAATGAGAAACCAG...GCGTACCTGGTCCGTTCCCAAAGGGCAACAGGCATTGGAAGGTTGATGGTGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381285.8
CDS-3UTR GCA 90 bp CACCATGTGAAAGGAGAAGGACCTCTACACGACCACCAGCACAGCCTCCCGACAGTAAAGGCGGACCTCTaGCTTAACTGGCCGGCACTT +
Preference number: 4 (lower is better)
Translates to: HHVKGEGPLHDHQHSLPTVKADL*LNWPAL
Trigger: AAGTGCCGGCCAGTTAAGGCAGAGGTCCGCCTTTAC...TGTCGGGAGGCTGTGCTGGTGGTCGTGTAGAGGTCCTTCTCCTTTCACATGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR GCA 90 bp CACCATGTGAAAGGAGAAGGACCTCTACACGACCACCAGCACAGCCTCCCGACAGCGCTTTTTCCCACGTaGTTGCAGCTCTCCTTCCCA +
Preference number: 4 (lower is better)
Translates to: HHVKGEGPLHDHQHSLPTALFPT*LQLSFP
Trigger: TGGGAAGGAGAGCTGCAAGCACGTGGGAAAAAGCGC...TGTCGGGAGGCTGTGCTGGTGGTCGTGTAGAGGTCCTTCTCCTTTCACATGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR GCA 90 bp AAGGGGCTAGACTCCCAGCTGCACCCTGTTGAGGGCTATGGGATTTCAGCGACCAGACCTGCTGCTAATTaGACACTCACCTCGAGCCCA +
Preference number: 4 (lower is better)
Translates to: KGLDSQLHPVEGYGISATRPAAN*TLTSSP
Trigger: TGGGCTCGAGGTGAGTGTGCAATTAGCAGCAGGTCT...GGTCGCTGAAATCCCATAGCCCTCAACAGGGTGCAGCTGGGAGTCTAGCCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR GCA 90 bp GGTGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGGCCGTGGGCGCAGGCCCGTCCAGCTaGCGCCCAGCTTCTAGGAGG +
Preference number: 4 (lower is better)
Translates to: GGFLEKEYNFQTACVAVGAGPSS*RPASRR
Trigger: CCTCCTAGAAGCTGGGCGGCAGCTGGACGGGCCTGC...GCCCACGGCCACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CCA 90 bp AAAAGGAATACAATTTCCAGACAGCATGTGTGGCCGTGGGCTGGGACCCTGCTGCTACGCTCCCTCCCCTaGCGCCTCCACTCTTCTCTA +
Preference number: 4 (lower is better)
Translates to: KRNTISRQHVWPWAGTLLLRSLP*RLHSSL
Trigger: TAGAGAAGAGTGGAGGCGCCAGGGGAGGGAGCGTAG...CAGCAGGGTCCCAGCCCACGGCCACACATGCTGTCTGGAAATTGTATTCCTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CCA 90 bp CACCATGTGAAAGGAGAAGGACCTCTACACGACCACCAGCACAGCCTCCCGACACCACTCTGCCACTGGTaGGACACTGGCCACATCAAA +
Preference number: 4 (lower is better)
Translates to: HHVKGEGPLHDHQHSLPTPLCHW*DTGHIK
Trigger: TTTGATGTGGCCAGTGTCCCACCAGTGGCAGAGTGG...TGTCGGGAGGCTGTGCTGGTGGTCGTGTAGAGGTCCTTCTCCTTTCACATGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CCA 90 bp ACTGAAGTGCAACTGAACGAGGAGGAGAGGTCCTCGCTCTCTGCACCATGTGAAAGCCCACTCTGCCACTaGTGGGACACTGGCCACATC +
Preference number: 4 (lower is better)
Translates to: TEVQLNEEERSSLSAPCESPLCH*WDTGHI
Trigger: GATGTGGCCAGTGTCCCACCAGTGGCAGAGTGGGCT...TTCACATGGTGCAGAGAGCGAGGACCTCTCCTCCTCGTTCAGTTGCACTTCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CCA 90 bp GCTCTGAAGAGGTTACTGCCAAAGGGGCGGGGGTCTCACGCAAGGCCAGTTTGGACAGGTGGCAGTGGTTaGCCAGACATAGCTACATCA +
Preference number: 4 (lower is better)
Translates to: ALKRLLPKGRGSHARPVWTGGSG*PDIATS
Trigger: TGATGTAGCTATGTCTGGCCAACCACTGCCACCTGT...CCAAACTGGCCTTGCGTGAGACCCCCGCCCCTTTGGCAGTAACCTCTTCAGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379960.9
CDS-3UTR CCA 90 bp ATCCGTTTCTGGTTTCTCATTCGTGCTGGTGGGCCACGTGGAGCTGAAGTCGGCCAGGACAGGTGGCAGTaGTTGGCCAGACATAGCTAC +
Preference number: 4 (lower is better)
Translates to: IRFWFLIRAGGPRGAEVGQDRWQ*LARHSY
Trigger: GTAGCTATGTCTGGCCAACCACTGCCACCTGTCCTG...GCCGACTTCAGCTCCACGTGGCCCACCAGCACGAATGAGAAACCAGAAACGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379960.9
CDS-3UTR CCA 90 bp CTGCACCATGTGAAAGGAGAAGGACCTCTACACGACCACCAGCACAGCCTCCCGTCCACTTCATCCAGTTaGTCTCGTAGGTGCTGCCGA +
Preference number: 4 (lower is better)
Translates to: LHHVKGEGPLHDHQHSLPSTSSS*SRRCCR
Trigger: TCGGCAGCACCTACGAGACCAACTGGATGAAGTGGA...CGGGAGGCTGTGCTGGTGGTCGTGTAGAGGTCCTTCTCCTTTCACATGGTGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CCA 90 bp GTTCACCATCAACCTTCCAATGCCTGTTGCCCTTTGGGAACGGACCAGGTACGCGGGTGCCTGGACAGCTaGCTTAGCTGGTTCTTGGTG +
Preference number: 4 (lower is better)
Translates to: VHHQPSNACCPLGTDQVRGCLDS*LSWFLV
Trigger: CACCAAGAACCAGCTAAGCCAGCTGTCCAGGCACCC...GCGTACCTGGTCCGTTCCCAAAGGGCAACAGGCATTGGAAGGTTGATGGTGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381285.8
CDS-3UTR CCA 90 bp GCTGCCCATGCATCCCAGTTATCCGTTTCTGGTTTCTCATTCGTGCTGGTGGGCGGGTGCCTGGACAGCTaGCTTAGCTGGTTCTTGGTG +
Preference number: 4 (lower is better)
Translates to: AAHASQLSVSGFSFVLVGGCLDS*LSWFLV
Trigger: CACCAAGAACCAGCTAAGCCAGCTGTCCAGGCACCC...GCCCACCAGCACGAATGAGAAACCAGAAACGGATAACTGGGATGCATGGGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379960.9
ENST00000419241.1
CDS-3UTR CCA 90 bp AAAAGGAATACAATTTCCAGACAGCATGTGTGGCCGTGGGCTGGGACCCTGCTGCACGCAAGGCCAGTTTaGGGGCAGGGGCAGATGTTG +
Preference number: 4 (lower is better)
Translates to: KRNTISRQHVWPWAGTLLHARPV*GQGQML
Trigger: CAACATCTGCCCCTGCCCCCAAACTGGCCTTGCGTG...CAGCAGGGTCCCAGCCCACGGCCACACATGCTGTCTGGAAATTGTATTCCTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CCA 90 bp ACGGGTTGCTCTTTCCATGTGACCGACAGGGTTTCAACTCGATGCCTTCAACCAGCCAGTGGCCGTGGCTaGAGTAAAGGCGGACCTCTG +
Preference number: 4 (lower is better)
Translates to: TGCSFHVTDRVSTRCLQPASGRG*SKGGPL
Trigger: CAGAGGTCCGCCTTTACTCCAGCCACGGCCACTGGC...TGGTTGAAGGCATCGAGTTGAAACCCTGTCGGTCACATGGAAAGAGCAACCCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381285.8
CDS-3UTR CCA 90 bp AACCACGTTCACCATCAACCTTCCAATGCCTGTTGCCCTTTGGGAACGGACCAGCCGAAACGACCGGCTTaGCTGCTGGAGAGGCTACTC +
Preference number: 4 (lower is better)
Translates to: NHVHHQPSNACCPLGTDQPKRPA*LLERLL
Trigger: GAGTAGCCTCTCCAGCAGCCAAGCCGGTCGTTTCGG...CTGGTCCGTTCCCAAAGGGCAACAGGCATTGGAAGGTTGATGGTGAACGTGGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381285.8
CDS-3UTR CCA 90 bp AACTCGATGCCTTCAACCACGTTCACCATCAACCTTCCAATGCCTGTTGCCCTTGCAGCCCCGTTGAGCTaGCGGCTGCAGAAGCGGATG +
Preference number: 4 (lower is better)
Translates to: NSMPSTTFTINLPMPVALAAPLS*RLQKRM
Trigger: CATCCGCTTCTGCAGCCGCCAGCTCAACGGGGCTGC...AAGGGCAACAGGCATTGGAAGGTTGATGGTGAACGTGGTTGAAGGCATCGAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381285.8
CDS-3UTR CCA 90 bp TACAATTTCCAGACAGCATGTGTGGCCGTGGGCTGGGACCCTGCTGAGCACACCGGGTTCAGAGTGTCCTaGATCGTCTTGGTGATGTGG +
Preference number: 4 (lower is better)
Translates to: YNFQTACVAVGWDPAEHTGFRVS*IVLVMW
Trigger: CCACATCACCAAGACGATCCAGGACACTCTGAACCC...GGTGTGCTCAGCAGGGTCCCAGCCCACGGCCACACATGCTGTCTGGAAATTGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CCA 90 bp AAAAGGAATACAATTTCCAGACAGCATGTGTGGCCGTGGGCTGGGACCCTGCTGCATCAGAAACCGGGCTaGCAGGCACATGGCAGTGGC +
Preference number: 4 (lower is better)
Translates to: KRNTISRQHVWPWAGTLLHQKPG*QAHGSG
Trigger: GCCACTGCCATGTGCCTGCCAGCCCGGTTTCTGATG...CAGCAGGGTCCCAGCCCACGGCCACACATGCTGTCTGGAAATTGTATTCCTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CCA 90 bp AAGGGGCTAGACTCCCAGCTGCACCCTGTTGAGGGCTATGGGATTTCAGCGACCAAGGTTTCGCCACGTTaGCCAGGCTGTTCTCGAACT +
Preference number: 4 (lower is better)
Translates to: KGLDSQLHPVEGYGISATKVSPR*PGCSRT
Trigger: AGTTCGAGAACAGCCTGGCCAACGTGGCGAAACCTT...GGTCGCTGAAATCCCATAGCCCTCAACAGGGTGCAGCTGGGAGTCTAGCCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CCA 90 bp CAGGATTCAGCACATTCAAGCACAGAACAGGTCACCAGCAACGACTGCTGCTATGCAGACCAGATCGTGTaGCCCAGCTGGGCAGGGAGG +
Preference number: 4 (lower is better)
Translates to: QDSAHSSTEQVTSNDCCYADQIV*PSWAGR
Trigger: CCTCCCTGCCCAGCTGGGCCACACGATCTGGTCTGC...ATAGCAGCAGTCGTTGCTGGTGACCTGTTCTGTGCTTGAATGTGCTGAATCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CCA 90 bp TGGGCTGCCCATGCATCCCAGTTATCCGTTTCTGGTTTCTCATTCGTGCTGGTGATCCGGGGCTGCATGTaGCCTAGTCTCATGGAGGGG +
Preference number: 4 (lower is better)
Translates to: WAAHASQLSVSGFSFVLVIRGCM*PSLMEG
Trigger: CCCCTCCATGAGACTAGGCCACATGCAGCCCCGGAT...CACCAGCACGAATGAGAAACCAGAAACGGATAACTGGGATGCATGGGCAGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419241.1
3UTR CAA 72 bp CAGTTGCTTCTCCAGTTCCAGTTGTCTTTTGCGCTCTaGCTCCTGGCGCTCACGCTCCTTCCTCTCCTGCTC +
Preference number: 4 (lower is better)
Translates to: QLLLQFQLSFAL*LLALTLLPLLL
Trigger: GAGCAGGAGAGGAAGGAGCGTGAGCGCCAGGAGCAAGAGCGCAAAAGACAACTGGAACTGGAGAAGCAACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379960.9
3UTR CAA 72 bp GGACCAGGGTGCCTGGACAGCTGGCTTAGCTGGTTCTaGGTGTTGATGGAAAAGCCGACCCAGCTTGTCTTG +
Preference number: 4 (lower is better)
Translates to: GPGCLDSWLSWF*VLMEKPTQLVL
Trigger: CAAGACAAGCTGGGTCGGCTTTTCCATCAACACCAAGAACCAGCTAAGCCAGCTGTCCAGGCACCCTGGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379960.9
3UTR CAA 72 bp TCTCACGCAAGGCCAGTTTGGGGGCAGGGGCAGATGTaGAATCAGTCACTGGTTTCACTGGAGCGGGAACCT +
Preference number: 4 (lower is better)
Translates to: SHARPVWGQGQM*NQSLVSLEREP
Trigger: AGGTTCCCGCTCCAGTGAAACCAGTGACTGATTCAACATCTGCCCCTGCCCCCAAACTGGCCTTGCGTGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379960.9
ENST00000419241.1
3UTR CAA 72 bp GCTTTTTCCCACGTGCCTTCTCCCGAAACGACCGGCTaGGCTGCTGGAGAGGCTACTCGCTTTAGACTAGCA +
Preference number: 4 (lower is better)
Translates to: AFSHVPSPETTG*AAGEATRFRLA
Trigger: TGCTAGTCTAAAGCGAGTAGCCTCTCCAGCAGCCAAGCCGGTCGTTTCGGGAGAAGGCACGTGGGAAAAAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379960.9
CDS-3UTR TCA 90 bp GGGGCAGGGGCAGATGTTGAATCAGTCACTGGTTTCACTGGAGCGGGAACCTCAAATGTGGCTGCAGGATaGGCAAATGCAGGCAGAGGT +
Preference number: 4 (lower is better)
Translates to: GAGADVESVTGFTGAGTSNVAAG*ANAGRG
Trigger: ACCTCTGCCTGCATTTGCTCATCCTGCAGCCACATT...TGAGGTTCCCGCTCCAGTGAAACCAGTGACTGATTCAACATCTGCCCCTGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379960.9
CDS-3UTR TCA 90 bp TTCCAGTTGTCTTTTGCGCTCTTGCTCCTGGCGCTCACGCTCCTTCCTCTCCTGTTCAGTCTTGATGACTaGGGAACAGCCCACTCTGCC +
Preference number: 4 (lower is better)
Translates to: FQLSFALLLLALTLLPLLFSLDD*GTAHSA
Trigger: GGCAGAGTGGGCTGTTCCTCAGTCATCAAGACTGAA...CAGGAGAGGAAGGAGCGTGAGCGCCAGGAGCAAGAGCGCAAAAGACAACTGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379960.9
CDS-3UTR TCA 90 bp GGGGCAGGGGCAGATGTTGAATCAGTCACTGGTTTCACTGGAGCGGGAACCTCATGCTTGTCCCTTTCCTaGGCTCGTCTTTGGGCTTCT +
Preference number: 4 (lower is better)
Translates to: GAGADVESVTGFTGAGTSCLSLS*ARLWAS
Trigger: AGAAGCCCAAAGACGAGCTCAGGAAAGGGACAAGCA...TGAGGTTCCCGCTCCAGTGAAACCAGTGACTGATTCAACATCTGCCCCTGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379960.9
CDS-3UTR TCA 90 bp GTTTCACTGGAGCGGGAACCTCATTTTCTGGGATTTTCTCTGCATAGTTTGCAGCGGCACTTGGAACGGTaGGAGAGGGCTGGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: VSLEREPHFLGFSLHSLQRHLER*ERAGLP
Trigger: GGGCAGCCCAGCCCTCTCTCACCGTTCCAAGTGCCG...CTGCAAACTATGCAGAGAAAATCCCAGAAAATGAGGTTCCCGCTCCAGTGAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379960.9
ENST00000419241.1
CDS-3UTR TCA 90 bp AACAGGGCTTCAGCTACAGCATATCTAACACACAAACGGACCATGAGCTCCATTCGGCACTTGGAACGGTaGGAGAGGGCTGGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: NRASATAYLTHKRTMSSIRHLER*ERAGLP
Trigger: GGGCAGCCCAGCCCTCTCTCACCGTTCCAAGTGCCG...AATGGAGCTCATGGTCCGTTTGTGTGTTAGATATGCTGTAGCTGAAGCCCTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR TCA 90 bp CTATGGGATTTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAACGGCACTTGGAACGGTaGGAGAGGGCTGGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: LWDFSDPRSHNETCSEDKRHLER*ERAGLP
Trigger: GGGCAGCCCAGCCCTCTCTCACCGTTCCAAGTGCCG...TTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAAATCCCATAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR TCA 90 bp GTGCTGGTGGGCCACGTGGAGCTGAAGTCGGCCCAGTTATTAGGGGTCGTGGAGTTATGGGCCCTGAAATaGGTTTCACGTAAGACTTGG +
Preference number: 4 (lower is better)
Translates to: VLVGHVELKSAQLLGVVELWALK*VSRKTW
Trigger: CCAAGTCTTACGTGAAACTCATTTCAGGGCCCATAA...CTCCACGACCCCTAATAACTGGGCCGACTTCAGCTCCACGTGGCCCACCAGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379960.9
CDS-3UTR TCA 90 bp TGTCCTACAACAATCAGGATTCAGCACATTCAAGCACAGAACAGGTCACCAGCACTGCTGAGCACACCCTaGGCCCGCTGCCTACGGCTC +
Preference number: 4 (lower is better)
Translates to: CPTTIRIQHIQAQNRSPALLSTP*ARCLRL
Trigger: GAGCCGTAGGCAGCGGGCTCAGGGTGTGCTCAGCAG...TGCTGGTGACCTGTTCTGTGCTTGAATGTGCTGAATCCTGATTGTTGTAGGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000381318.8
CDS-3UTR TCA 90 bp CTGTTGCCCTTTGGGAACGGACCAGGTACGCTTTCTCGCGCTTCTTTTTCTCAGCCAGCTGCACCCTGTTaGGGGCTATGGGATTTCAGC +
Preference number: 4 (lower is better)
Translates to: LLPFGNGPGTLSRASFSQPAAPC*GLWDFS
Trigger: GCTGAAATCCCATAGCCCTCAACAGGGTGCAGCTGG...CTGAGAAAAAGAAGCGCGAGAAAGCGTACCTGGTCCGTTCCCAAAGGGCAACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381285.8
CDS-3UTR TCA 90 bp GCTTTGAGGGGCCTGTCTTTGCCATCCCATATCCCTGTGACTGAATACCAAATGGCACACACCACGCACTaGGCTGCTGCGTCCCACCAA +
Preference number: 4 (lower is better)
Translates to: ALRGLSLPSHIPVTEYQMAHTTH*AAASHQ
Trigger: TTGGTGGGACGCAGCAGCTCAGTGCGTGGTGTGTGC...CATTTGGTATTCAGTCACAGGGATATGGGATGGCAAAGACAGGCCCCTCAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR TCA 90 bp CACCATGTGAAAGGAGAAGGACCTCTACACGACCACCAGCACAGCCTCCCGACAGGCTTTCATCCACCATaGCTATGTCTCCTGGCTGGA +
Preference number: 4 (lower is better)
Translates to: HHVKGEGPLHDHQHSLPTGFHPP*LCLLAG
Trigger: TCCAGCCAGGAGACATAGTCATGGTGGATGAAAGCC...TGTCGGGAGGCTGTGCTGGTGGTCGTGTAGAGGTCCTTCTCCTTTCACATGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399349.5
ENST00000399352.5
CDS-3UTR TCA 90 bp ACTGAAGTGCAACTGAACGAGGAGGAGAGGTCCTCGCTCTCTGCACCATGTGAACAGCTAGATTGTGCTTaGGGCTCCCCCTGCCCCATT +
Preference number: 4 (lower is better)
Translates to: TEVQLNEEERSSLSAPCEQLDCA*GSPCPI
Trigger: AATGGGGCAGGGGGAGCCTCAAGCACAATCTAGCTG...TTCACATGGTGCAGAGAGCGAGGACCTCTCCTCCTCGTTCAGTTGCACTTCAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR GCA 90 bp GCCCAGTTATTAGGGGTCGTGGAGGGCTCTGAAGAGGTTACTGCCAAAGGGGCGTCTCCAGTTCCAGGTTaGCACGTTCAAAGTTCTCCC +
Preference number: 4 (lower is better)
Translates to: AQLLGVVEGSEEVTAKGASPVPG*HVQSSP
Trigger: GGGAGAACTTTGAACGTGGCAACCTGGAACTGGAGA...CGCCCCTTTGGCAGTAACCTCTTCAGAGCCCTCCACGACCCCTAATAACTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379960.9
CDS-3UTR GCA 90 bp TACAATTTCCAGACAGCATGTGTGGCCGTGGGCTGGGACCCTGCTGAGCACACCTCTCCAGTTCCAGGTTaGCACGTTCAAAGTTCTCCC +
Preference number: 4 (lower is better)
Translates to: YNFQTACVAVGWDPAEHTSPVPG*HVQSSP
Trigger: GGGAGAACTTTGAACGTGGCAACCTGGAACTGGAGA...GGTGTGCTCAGCAGGGTCCCAGCCCACGGCCACACATGCTGTCTGGAAATTGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR GCA 90 bp TACAATTTCCAGACAGCATGTGTGGCCGTGGGCTGGGACCCTGCTGAGCACACCTGTTCCAGGAGAGCTTaGCTTCGTTTCTCCAGTTCC +
Preference number: 4 (lower is better)
Translates to: YNFQTACVAVGWDPAEHTCSRRA*LRFSSS
Trigger: GGAACTGGAGAAACGAAGGCAAGCTCTCCTGGAACA...GGTGTGCTCAGCAGGGTCCCAGCCCACGGCCACACATGCTGTCTGGAAATTGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR GCA 90 bp TGGGCTGCCCATGCATCCCAGTTATCCGTTTCTGGTTTCTCATTCGTGCTGGTGTGTCTTTTGCGCTCTTaGTCCTGGCGCTCACGCTCC +
Preference number: 4 (lower is better)
Translates to: WAAHASQLSVSGFSFVLVCLLRS*SWRSRS
Trigger: GGAGCGTGAGCGCCAGGAGCAAGAGCGCAAAAGACA...CACCAGCACGAATGAGAAACCAGAAACGGATAACTGGGATGCATGGGCAGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379960.9
CDS-3UTR GCA 90 bp TTCTCCAGGGCGTGCTTCAAGTGGCTGTGGTCCGGGTGGTTTTCAGGGGTGTTTGTTCCAGTTGTCTTTTaGGCTCTTGCTCCTGGCGCT +
Preference number: 4 (lower is better)
Translates to: FSRACFKWLWSGWFSGVFVPVVF*ALAPGA
Trigger: AGCGCCAGGAGCAAGAGCGCAAAAGACAACTGGAAC...AAACACCCCTGAAAACCACCCGGACCACAGCCACTTGAAGCACGCCCTGGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381285.8
CDS-3UTR GCA 90 bp TGCCTTCAACCACGTTCACCATCAACCTTCCAATGCCTGTTGCCCTTTGGGAACCTCTCCTCCTCTCTCTaGCGTTCTAGCTCCCGCTGC +
Preference number: 4 (lower is better)
Translates to: CLQPRSPSTFQCLLPFGNLSSSL*RSSSRC
Trigger: GCAGCGGGAGCTAGAACGGCAGAGAGAGGAGGAGAG...GTTCCCAAAGGGCAACAGGCATTGGAAGGTTGATGGTGAACGTGGTTGAAGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381285.8
CDS-3UTR GCA 90 bp CTGAAGAGGTTACTGCCAAAGGGGCGGGGGTCTCACGCAAGGCCAGTTTGGGGGGTGCTCTCAATTTCTTaGCTTTGGGTGGTCAATCGA +
Preference number: 4 (lower is better)
Translates to: LKRLLPKGRGSHARPVWGVLSIS*LWVVNR
Trigger: TCGATTGACCACCCAAAGGCAAGAAATTGAGAGCAC...CCCCCAAACTGGCCTTGCGTGAGACCCCCGCCCCTTTGGCAGTAACCTCTTCAG
56% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000379960.9
CDS-3UTR GCA 90 bp GGCTCTGAAGAGGTTACTGCCAAAGGGGCGGGGGTCTCACGCAAGGCCAGTTTGAGTTGGTCTCGTAGGTaGTGCCGAGCTAGTTCTTTT +
Preference number: 4 (lower is better)
Translates to: GSEEVTAKGAGVSRKASLSWSRR*CRASSF
Trigger: AAAAGAACTAGCTCGGCAGCACCTACGAGACCAACT...CAAACTGGCCTTGCGTGAGACCCCCGCCCCTTTGGCAGTAACCTCTTCAGAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379960.9
CDS-3UTR GCA 90 bp GTGCTGGTGGGCCACGTGGAGCTGAAGTCGGCCCAGTTATTAGGGGTCGTGGAGGCCTCCATGGACTTTTaGTTCTGGAGTTGTTGCTTA +
Preference number: 4 (lower is better)
Translates to: VLVGHVELKSAQLLGVVEASMDF*FWSCCL
Trigger: TAAGCAACAACTCCAGAAGCAAAAGTCCATGGAGGC...CTCCACGACCCCTAATAACTGGGCCGACTTCAGCTCCACGTGGCCCACCAGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379960.9
CDS-3UTR GCA 90 bp GAAACTTCCATAGACCAGCTCTTCAAAGAGCTAAGCCAGGGCCTGATCAGACCGTGCTCGTCCTCCTGCTaGACATGCTCCAGCCACTGC +
Preference number: 4 (lower is better)
Translates to: ETSIDQLFKELSQGLIRPCSSSC*TCSSHC
Trigger: GCAGTGGCTGGAGCATGTGCAGCAGGAGGACGAGCA...CGGTCTGATCAGGCCCTGGCTTAGCTCTTTGAAGAGCTGGTCTATGGAAGTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000381318.8
CDS-3UTR GCA 90 bp GTGCTGGTGGGCCACGTGGAGCTGAAGTCGGCCCAGTTATTAGGGGTCGTGGAGTTCAAAGGGGTACAGTaGCCGGTAATACACCACTTT +
Preference number: 4 (lower is better)
Translates to: VLVGHVELKSAQLLGVVEFKGVQ*PVIHHF
Trigger: AAAGTGGTGTATTACCGGGCACTGTACCCCTTTGAA...CTCCACGACCCCTAATAACTGGGCCGACTTCAGCTCCACGTGGCCCACCAGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379960.9
ENST00000419241.1
CDS-3UTR GCA 90 bp ACTGAAGTGCAACTGAACGAGGAGGAGAGGTCCTCGCTCTCTGCACCATGTGAACTGGTTTCTCATTCGTaGTGGTGGGCCACGTGGAGC +
Preference number: 4 (lower is better)
Translates to: TEVQLNEEERSSLSAPCELVSHS*WWATWS
Trigger: GCTCCACGTGGCCCACCAGCACGAATGAGAAACCAG...TTCACATGGTGCAGAGAGCGAGGACCTCTCCTCCTCGTTCAGTTGCACTTCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR GCA 90 bp TGCCCATGCATCCCAGTTATCCGTTTCTGGTTTCTCATTCGTGCTGGTGGGCCACTGGTTTCTCATTCGTaGTGGTGGGCCACGTGGAGC +
Preference number: 4 (lower is better)
Translates to: CPCIPVIRFWFLIRAGGPLVSHS*WWATWS
Trigger: GCTCCACGTGGCCCACCAGCACGAATGAGAAACCAG...TGGCCCACCAGCACGAATGAGAAACCAGAAACGGATAACTGGGATGCATGGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379960.9
ENST00000419241.1
CDS-3UTR GCA 90 bp TACAATTTCCAGACAGCATGTGTGGCCGTGGGCTGGGACCCTGCTGAGCACACCTTTTTCCCACGTGCTTaGAGCTCTCCTTCCCACCAT +
Preference number: 4 (lower is better)
Translates to: YNFQTACVAVGWDPAEHTFFPRA*SSPSHH
Trigger: ATGGTGGGAAGGAGAGCTGCAAGCACGTGGGAAAAA...GGTGTGCTCAGCAGGGTCCCAGCCCACGGCCACACATGCTGTCTGGAAATTGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR GCA 90 bp GGAACGGACCAGGTACGCTTTCTCGCGCTTCTTTTTCTCAGTCTCTATGTAGAGGCCTCATCCGTCTTCTaGTGGATCAGGGCAGCCCCG +
Preference number: 4 (lower is better)
Translates to: GTDQVRFLALLFLSLYVEASSVF*WIRAAP
Trigger: CGGGGCTGCCCTGATCCAGCAGAAGACGGATGAGGC...CTCTACATAGAGACTGAGAAAAAGAAGCGCGAGAAAGCGTACCTGGTCCGTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381285.8
CDS-3UTR GCA 90 bp GACCGACAGGGTTTCAACTCGATGCCTTCAACCACGTTCACCATCAACCTTCCAGCCTTCTCCAGGGCGTaGTTCAAGTGGCTGTGGTCC +
Preference number: 4 (lower is better)
Translates to: DRQGFNSMPSTTFTINLPAFSRA*FKWLWS
Trigger: GGACCACAGCCACTTGAAGCACGCCCTGGAGAAGGC...TGGAAGGTTGATGGTGAACGTGGTTGAAGGCATCGAGTTGAAACCCTGTCGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000420666.1
CDS-3UTR GCA 90 bp TACAATTTCCAGACAGCATGTGTGGCCGTGGGCTGGGACCCTGCTGAGCACACCCCATCAACCTTCCAATaGCTGTTGCCCTTTGGGAAC +
Preference number: 4 (lower is better)
Translates to: YNFQTACVAVGWDPAEHTPSTFQ*LLPFGN
Trigger: GTTCCCAAAGGGCAACAGGCATTGGAAGGTTGATGG...GGTGTGCTCAGCAGGGTCCCAGCCCACGGCCACACATGCTGTCTGGAAATTGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR GCA 90 bp GGGATTTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAGGAACTCCTCCAGGTCACCTaGCCTGCAGTCCACCCAGCC +
Preference number: 4 (lower is better)
Translates to: GISATLEAIMRPVVRTKELLQVT*PAVHPA
Trigger: GGCTGGGTGGACTGCAGGGCAGGTGACCTGGAGGAG...TTCCTTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAAATCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR GCA 90 bp ACAGAATCCTCCTTAGGTGGCCTAAGGGGCACTTCTGGTGGCCAAGTACAGAAAGCACAGACTCCGGCTTaGGGGGCTACAGCAGATGAG +
Preference number: 4 (lower is better)
Translates to: TESSLGGLRGTSGGQVQKAQTPA*GATADE
Trigger: CTCATCTGCTGTAGCCCCGCAAGCCGGAGTCTGTGC...TTTCTGTACTTGGCCACCAGAAGTGCCCCTTAGGCCACCTAAGGAGGATTCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CCA 90 bp AGCACAGAACAGGTCACCAGCAACGACTGCTGCTATGAAATATCACAGGCCTCCCTACGCTCCCTCCCCTaGCGCCTCCACTCTTCTCTA +
Preference number: 4 (lower is better)
Translates to: STEQVTSNDCCYEISQASLRSLP*RLHSSL
Trigger: TAGAGAAGAGTGGAGGCGCCAGGGGAGGGAGCGTAG...GGAGGCCTGTGATATTTCATAGCAGCAGTCGTTGCTGGTGACCTGTTCTGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000381318.8
CDS-3UTR CCA 90 bp GGGCTGGGCTGCCCATGCATCCCAGTTATCCGTTTCTGGTTTCTCATTCGTGCTAACAGCTGTAAGCGGTaGCATGCTGGCGATACCTCC +
Preference number: 4 (lower is better)
Translates to: GLGCPCIPVIRFWFLIRANSCKR*HAGDTS
Trigger: GGAGGTATCGCCAGCATGCCACCGCTTACAGCTGTT...AGCACGAATGAGAAACCAGAAACGGATAACTGGGATGCATGGGCAGCCCAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379960.9
CDS-3UTR CCA 90 bp CTGCACCATGTGAAAGGAGAAGGACCTCTACACGACCACCAGCACAGCCTCCCGTGGAATGGATCCCATTaGCACTGGAGCAACAGCTGT +
Preference number: 4 (lower is better)
Translates to: LHHVKGEGPLHDHQHSLPWNGSH*HWSNSC
Trigger: ACAGCTGTTGCTCCAGTGCCAATGGGATCCATTCCA...CGGGAGGCTGTGCTGGTGGTCGTGTAGAGGTCCTTCTCCTTTCACATGGTGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CCA 90 bp AAGGGGCTAGACTCCCAGCTGCACCCTGTTGAGGGCTATGGGATTTCAGCGACCTGGAATGGATCCCATTaGCACTGGAGCAACAGCTGT +
Preference number: 4 (lower is better)
Translates to: KGLDSQLHPVEGYGISATWNGSH*HWSNSC
Trigger: ACAGCTGTTGCTCCAGTGCCAATGGGATCCATTCCA...GGTCGCTGAAATCCCATAGCCCTCAACAGGGTGCAGCTGGGAGTCTAGCCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CCA 90 bp CTTAACTGGCCGGCACTTGGAACGGTGAGAGAGGGCTGGGCTGCCCATGCATCCAGACATTCCAACAACTaGAATGGATCCCATTGGCAC +
Preference number: 4 (lower is better)
Translates to: LNWPALGTVREGWAAHASRHSNN*NGSHWH
Trigger: GTGCCAATGGGATCCATTCCAGTTGTTGGAATGTCT...GGATGCATGGGCAGCCCAGCCCTCTCTCACCGTTCCAAGTGCCGGCCAGTTAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379960.9
CDS-3UTR CCA 90 bp GCTGCCCATGCATCCCAGTTATCCGTTTCTGGTTTCTCATTCGTGCTGGTGGGCGGGGCACAGCTGCTGTaGGAACAGAAGATACTAGGG +
Preference number: 4 (lower is better)
Translates to: AAHASQLSVSGFSFVLVGGAQLL*EQKILG
Trigger: CCCTAGTATCTTCTGTTCCCACAGCAGCTGTGCCCC...GCCCACCAGCACGAATGAGAAACCAGAAACGGATAACTGGGATGCATGGGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379960.9
CDS-3UTR CCA 90 bp ATCCGTTTCTGGTTTCTCATTCGTGCTGGTGGGCCACGTGGAGCTGAAGTCGGCCCACTGGTGGGACACTaGCCACATCAAATGACTGTG +
Preference number: 4 (lower is better)
Translates to: IRFWFLIRAGGPRGAEVGPLVGH*PHQMTV
Trigger: CACAGTCATTTGATGTGGCCAGTGTCCCACCAGTGG...GCCGACTTCAGCTCCACGTGGCCCACCAGCACGAATGAGAAACCAGAAACGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379960.9
CDS-3UTR CCA 90 bp GTCCCTCTCGAACACAGTGATGCAGAGGACTTCCTGCTCCAGGTCTCGGATGAACCACTCTGCCACTGGTaGGACACTGGCCACATCAAA +
Preference number: 4 (lower is better)
Translates to: VPLEHSDAEDFLLQVSDEPLCHW*DTGHIK
Trigger: TTTGATGTGGCCAGTGTCCCACCAGTGGCAGAGTGG...TTCATCCGAGACCTGGAGCAGGAAGTCCTCTGCATCACTGTGTTCGAGAGGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381285.8
CDS-3UTR CCA 90 bp CTTCAACCACGTTCACCATCAACCTTCCAATGCCTGTTGCCCTTTGGGAACGGAAGCCCACTCTGCCACTaGTGGGACACTGGCCACATC +
Preference number: 4 (lower is better)
Translates to: LQPRSPSTFQCLLPFGNGSPLCH*WDTGHI
Trigger: GATGTGGCCAGTGTCCCACCAGTGGCAGAGTGGGCT...TCCGTTCCCAAAGGGCAACAGGCATTGGAAGGTTGATGGTGAACGTGGTTGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381285.8
CDS-3UTR CCA 90 bp TACAATTTCCAGACAGCATGTGTGGCCGTGGGCTGGGACCCTGCTGAGCACACCACAGGTGGCAGTGGTTaGCCAGACATAGCTACATCA +
Preference number: 4 (lower is better)
Translates to: YNFQTACVAVGWDPAEHTTGGSG*PDIATS
Trigger: TGATGTAGCTATGTCTGGCCAACCACTGCCACCTGT...GGTGTGCTCAGCAGGGTCCCAGCCCACGGCCACACATGCTGTCTGGAAATTGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CCA 90 bp CTGCACCATGTGAAAGGAGAAGGACCTCTACACGACCACCAGCACAGCCTCCCGACAGGTGGCAGTGGTTaGCCAGACATAGCTACATCA +
Preference number: 4 (lower is better)
Translates to: LHHVKGEGPLHDHQHSLPTGGSG*PDIATS
Trigger: TGATGTAGCTATGTCTGGCCAACCACTGCCACCTGT...CGGGAGGCTGTGCTGGTGGTCGTGTAGAGGTCCTTCTCCTTTCACATGGTGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CCA 90 bp ACTGAAGTGCAACTGAACGAGGAGGAGAGGTCCTCGCTCTCTGCACCATGTGAAGGGTGCCTGGACAGCTaGCTTAGCTGGTTCTTGGTG +
Preference number: 4 (lower is better)
Translates to: TEVQLNEEERSSLSAPCEGCLDS*LSWFLV
Trigger: CACCAAGAACCAGCTAAGCCAGCTGTCCAGGCACCC...TTCACATGGTGCAGAGAGCGAGGACCTCTCCTCCTCGTTCAGTTGCACTTCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CCA 90 bp CAACTCGATGCCTTCAACCACGTTCACCATCAACCTTCCAATGCCTGTTGCCCTGTGGACCAGGGTGCCTaGACAGCTGGCTTAGCTGGT +
Preference number: 4 (lower is better)
Translates to: QLDAFNHVHHQPSNACCPVDQGA*TAGLAG
Trigger: ACCAGCTAAGCCAGCTGTCCAGGCACCCTGGTCCAC...AGGGCAACAGGCATTGGAAGGTTGATGGTGAACGTGGTTGAAGGCATCGAGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381285.8
CDS-3UTR CCA 90 bp CAGCCAGAGGGCATCGTTCTAAGGAAGGAGAGTCAGGGCCTGTTTGGGGTTGGTCCGGGTTCTCCAGTTTaGCTTTCATCCACCCATTCC +
Preference number: 4 (lower is better)
Translates to: QPEGIVLRKESQGLFGVGPGSPV*LSSTHS
Trigger: GGAATGGGTGGATGAAAGCCAAACTGGAGAACCCGG...ACCAACCCCAAACAGGCCCTGACTCTCCTTCCTTAGAACGATGCCCTCTGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CCA 90 bp GCTCTGAAGAGGTTACTGCCAAAGGGGCGGGGGTCTCACGCAAGGCCAGTTTGGAGTCACTGGTTTCACTaGAGCGGGAACCTCATTTTC +
Preference number: 4 (lower is better)
Translates to: ALKRLLPKGRGSHARPVWSHWFH*SGNLIF
Trigger: GAAAATGAGGTTCCCGCTCCAGTGAAACCAGTGACT...CCAAACTGGCCTTGCGTGAGACCCCCGCCCCTTTGGCAGTAACCTCTTCAGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000379960.9
ENST00000419241.1
CDS-3UTR CCA 90 bp CCCTTTGGGAACGGACCAGGTACGCTTTCTCGCGCTTCTTTTTCTCAGTCTCTACACGCAAGGCCAGTTTaGGGGCAGGGGCAGATGTTG +
Preference number: 4 (lower is better)
Translates to: PFGNGPGTLSRASFSQSLHARPV*GQGQML
Trigger: CAACATCTGCCCCTGCCCCCAAACTGGCCTTGCGTG...TAGAGACTGAGAAAAAGAAGCGCGAGAAAGCGTACCTGGTCCGTTCCCAAAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000381285.8
CDS-3UTR CCA 90 bp GTGCTGGTGGGCCACGTGGAGCTGAAGTCGGCCCAGTTATTAGGGGTCGTGGAGCCAGTTATCCGTTTCTaGTTTCTCATTCGTGCTGGT +
Preference number: 4 (lower is better)
Translates to: VLVGHVELKSAQLLGVVEPVIRF*FLIRAG
Trigger: ACCAGCACGAATGAGAAACCAGAAACGGATAACTGG...CTCCACGACCCCTAATAACTGGGCCGACTTCAGCTCCACGTGGCCCACCAGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379960.9
ENST00000419241.1
CDS-3UTR CCA 90 bp ATCCCAGTTATCCGTTTCTGGTTTCTCATTCGTGCTGGTGGGCCACGTGGAGCTGACCTCTGCCTTAACTaGCCGGCACTTGGAACGGTG +
Preference number: 4 (lower is better)
Translates to: IPVIRFWFLIRAGGPRGADLCLN*PALGTV
Trigger: CACCGTTCCAAGTGCCGGCCAGTTAAGGCAGAGGTC...AGCTCCACGTGGCCCACCAGCACGAATGAGAAACCAGAAACGGATAACTGGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379960.9
ENST00000419241.1
CDS-3UTR CCA 90 bp ACGCTATTAATGAAATGCCCCTGGAGAACACTTGCAGAACTTCCCGTAGTCCGGGCCAGTGGCCGTGGCTaGAGTAAAGGCGGACCTCTG +
Preference number: 4 (lower is better)
Translates to: TLLMKCPWRTLAELPVVRASGRG*SKGGPL
Trigger: CAGAGGTCCGCCTTTACTCCAGCCACGGCCACTGGC...CCGGACTACGGGAAGTTCTGCAAGTGTTCTCCAGGGGCATTTCATTAATAGCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CCA 90 bp TCAATTTCTTTCCTCCTCTCCTCCTCTCTCTGCCGTTCTAGCTCCCGCTGCTTTCCGAAACGACCGGCTTaGCTGCTGGAGAGGCTACTC +
Preference number: 4 (lower is better)
Translates to: SISFLLSSSLCRSSSRCFPKRPA*LLERLL
Trigger: GAGTAGCCTCTCCAGCAGCCAAGCCGGTCGTTTCGG...AAAGCAGCGGGAGCTAGAACGGCAGAGAGAGGAGGAGAGGAGGAAAGAAATTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379960.9
CDS-3UTR CCA 90 bp AAAAGGAATACAATTTCCAGACAGCATGTGTGGCCGTGGGCTGGGACCCTGCTGGGCACTGGGAACCCATaGTCACCTCACAGTACGGGT +
Preference number: 4 (lower is better)
Translates to: KRNTISRQHVWPWAGTLLGTGNP*SPHSTG
Trigger: ACCCGTACTGTGAGGTGACCATGGGTTCCCAGTGCC...CAGCAGGGTCCCAGCCCACGGCCACACATGCTGTCTGGAAATTGTATTCCTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CCA 90 bp CAAACAACTGCAGGTCCAAGCGGACCACAATCTCTCCCGTGGGGACTTCGTGCAATCGTCTTGGTGATGTaGCACTGGGAACCCATGGTC +
Preference number: 4 (lower is better)
Translates to: QTTAGPSGPQSLPWGLRAIVLVM*HWEPMV
Trigger: GACCATGGGTTCCCAGTGCCACATCACCAAGACGAT...TGCACGAAGTCCCCACGGGAGAGATTGTGGTCCGCTTGGACCTGCAGTTGTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381285.8
CDS-3UTR CCA 90 bp AAAGCTGATGCAGAAAGGGTGGGAAGCCTGAGGACCTCCGTGCAGCCCCAGCCTCCAGAACTTGCTACATaGCAGGAGCATCTCAAGGAT +
Preference number: 4 (lower is better)
Translates to: KADAERVGSLRTSVQPQPPELAT*QEHLKD
Trigger: ATCCTTGAGATGCTCCTGCCATGTAGCAAGTTCTGG...AGGCTGGGGCTGCACGGAGGTCCTCAGGCTTCCCACCCTTTCTGCATCAGCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CCA 90 bp AGCACAGAACAGGTCACCAGCAACGACTGCTGCTATGAAATATCACAGGCCTCCCCCCTGGAGGACACCTaGGCTTTGGTACCAGGTCAC +
Preference number: 4 (lower is better)
Translates to: STEQVTSNDCCYEISQASPLEDT*ALVPGH
Trigger: GTGACCTGGTACCAAAGCCCAGGTGTCCTCCAGGGG...GGAGGCCTGTGATATTTCATAGCAGCAGTCGTTGCTGGTGACCTGTTCTGTGCT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CCA 90 bp CAGCCAGAGGGCATCGTTCTAAGGAAGGAGAGTCAGGGCCTGTTTGGGGTTGGTGGTTTCTGGGGCTACTaGTTATGCTTCTGCCTGGTG +
Preference number: 4 (lower is better)
Translates to: QPEGIVLRKESQGLFGVGGFWGY*LCFCLV
Trigger: CACCAGGCAGAAGCATAACCAGTAGCCCCAGAAACC...ACCAACCCCAAACAGGCCCTGACTCTCCTTCCTTAGAACGATGCCCTCTGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CCA 90 bp AGCCAAAAGAGATTTTTCCAACATGGCTGCCAACCGAGACCCAGTGACCCAACAGGGAGGCTGGACTCCTaGGGTTGCCCCCTCCTGAAA +
Preference number: 4 (lower is better)
Translates to: SQKRFFQHGCQPRPSDPTGRLDS*GCPLLK
Trigger: TTTCAGGAGGGGGCAACCCCAGGAGTCCAGCCTCCC...TGTTGGGTCACTGGGTCTCGGTTGGCAGCCATGTTGGAAAAATCTCTTTTGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CCA 90 bp TACAATTTCCAGACAGCATGTGTGGCCGTGGGCTGGGACCCTGCTGAGCACACCCCGGGTTCTCCAGTTTaGCTTTCATCCACCATGACT +
Preference number: 4 (lower is better)
Translates to: YNFQTACVAVGWDPAEHTPGSPV*LSSTMT
Trigger: AGTCATGGTGGATGAAAGCCAAACTGGAGAACCCGG...GGTGTGCTCAGCAGGGTCCCAGCCCACGGCCACACATGCTGTCTGGAAATTGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000399367.7
3UTR CAA 72 bp CAATGCCTAGCAGCTGCGGTAGGTGGAGCCGGCACCTaGAAATCTGCCAGTGAAAACAGCGAGTTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: QCLAAAVGGAGT*KSASENSEFPP
Trigger: AGGAGGAAACTCGCTGTTTTCACTGGCAGATTTCAAGGTGCCGGCTCCACCTACCGCAGCTGCTAGGCATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR CAA 72 bp CACTTCGTAACTGGACCTTTGGAGCCCTGGTCTTTCTaGATGTCCGCCACACGGATCTCCGTCCGACCCAAA +
Preference number: 4 (lower is better)
Translates to: HFVTGPLEPWSF*MSATRISVRPK
Trigger: TTTGGGTCGGACGGAGATCCGTGTGGCGGACATCAAGAAAGACCAGGGCTCCAAAGGTCCAGTTACGAAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381285.8
CDS-3UTR TCA 90 bp CTGCACCATGTGAAAGGAGAAGGACCTCTACACGACCACCAGCACAGCCTCCCGAGTGCAGAGGGTAGCTaGTATCCTTGTAGCTTCAGT +
Preference number: 4 (lower is better)
Translates to: LHHVKGEGPLHDHQHSLPSAEGS*YPCSFS
Trigger: ACTGAAGCTACAAGGATATCAGCTACCCTCTGCACT...CGGGAGGCTGTGCTGGTGGTCGTGTAGAGGTCCTTCTCCTTTCACATGGTGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR TCA 90 bp AAAAGGAATACAATTTCCAGACAGCATGTGTGGCCGTGGGCTGGGACCCTGCTGCTGGTTGCTGTTTCATaGCAGGGGGAAGTGCAGAGG +
Preference number: 4 (lower is better)
Translates to: KRNTISRQHVWPWAGTLLLVAVS*QGEVQR
Trigger: CCTCTGCACTTCCCCCTGTCATGAAACAGCAACCAG...CAGCAGGGTCCCAGCCCACGGCCACACATGCTGTCTGGAAATTGTATTCCTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR TCA 90 bp GCCCAGTTATTAGGGGTCGTGGAGGGCTCTGAAGAGGTTACTGCCAAAGGGGCGAGAAAGATTCCATATTaGAGCCAGCTGAGCCTGTGG +
Preference number: 4 (lower is better)
Translates to: AQLLGVVEGSEEVTAKGARKIPY*SQLSLW
Trigger: CCACAGGCTCAGCTGGCTTCAATATGGAATCTTTCT...CGCCCCTTTGGCAGTAACCTCTTCAGAGCCCTCCACGACCCCTAATAACTGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379960.9
CDS-3UTR TCA 90 bp AAGGGGCTAGACTCCCAGCTGCACCCTGTTGAGGGCTATGGGATTTCAGCGACCAGAAAGATTCCATATTaGAGCCAGCTGAGCCTGTGG +
Preference number: 4 (lower is better)
Translates to: KGLDSQLHPVEGYGISATRKIPY*SQLSLW
Trigger: CCACAGGCTCAGCTGGCTTCAATATGGAATCTTTCT...GGTCGCTGAAATCCCATAGCCCTCAACAGGGTGCAGCTGGGAGTCTAGCCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR TCA 90 bp GGCTCTGAAGAGGTTACTGCCAAAGGGGCGGGGGTCTCACGCAAGGCCAGTTTGGTTGCTGTAGATGGGTaGTTTCGGCAATTCTCAACT +
Preference number: 4 (lower is better)
Translates to: GSEEVTAKGAGVSRKASLVAVDG*FRQFST
Trigger: AGTTGAGAATTGCCGAAATCACCCATCTACAGCAAC...CAAACTGGCCTTGCGTGAGACCCCCGCCCCTTTGGCAGTAACCTCTTCAGAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379960.9
CDS-3UTR TCA 90 bp TGCCCATGCATCCCAGTTATCCGTTTCTGGTTTCTCATTCGTGCTGGTGGGCCAGCTGGTTCTTGGTGTTaGTGGAAAAGCCGACCCAGC +
Preference number: 4 (lower is better)
Translates to: CPCIPVIRFWFLIRAGGPAGSWC*WKSRPS
Trigger: GCTGGGTCGGCTTTTCCATCAACACCAAGAACCAGC...TGGCCCACCAGCACGAATGAGAAACCAGAAACGGATAACTGGGATGCATGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379960.9
CDS-3UTR TCA 90 bp ACTGAAGTGCAACTGAACGAGGAGGAGAGGTCCTCGCTCTCTGCACCATGTGAAGCTGGTTCTTGGTGTTaGTGGAAAAGCCGACCCAGC +
Preference number: 4 (lower is better)
Translates to: TEVQLNEEERSSLSAPCEAGSWC*WKSRPS
Trigger: GCTGGGTCGGCTTTTCCATCAACACCAAGAACCAGC...TTCACATGGTGCAGAGAGCGAGGACCTCTCCTCCTCGTTCAGTTGCACTTCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR TCA 90 bp TCGATGCCTTCAACCACGTTCACCATCAACCTTCCAATGCCTGTTGCCCTTTGGGGTCGTGGAGGGCTCTaGAGAGGTTACTGCCAAAGG +
Preference number: 4 (lower is better)
Translates to: SMPSTTFTINLPMPVALWGRGGL*RGYCQR
Trigger: CCTTTGGCAGTAACCTCTTCAGAGCCCTCCACGACC...CCAAAGGGCAACAGGCATTGGAAGGTTGATGGTGAACGTGGTTGAAGGCATCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381285.8
CDS-3UTR TCA 90 bp ACTGAAGTGCAACTGAACGAGGAGGAGAGGTCCTCGCTCTCTGCACCATGTGAACAAGGATATAGGGCTTaGGCTTGTAGCCCCTCCACC +
Preference number: 4 (lower is better)
Translates to: TEVQLNEEERSSLSAPCEQGYRA*ACSPST
Trigger: GGTGGAGGGGCTACAAGCTCAAGCCCTATATCCTTG...TTCACATGGTGCAGAGAGCGAGGACCTCTCCTCCTCGTTCAGTTGCACTTCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR TCA 90 bp TTGTTTCATGAAACAGGAAATTGTTTCGGGGCAGGGAGGATTGTCGAGAATGATGGGCTGGGACCCTGCTaGGCACACCCTGAGCCCGCT +
Preference number: 4 (lower is better)
Translates to: LFHETGNCFGAGRIVENDGLGPC*AHPEPA
Trigger: AGCGGGCTCAGGGTGTGCTCAGCAGGGTCCCAGCCC...ATCATTCTCGACAATCCTCCCTGCCCCGAAACAATTTCCTGTTTCATGAAACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR TCA 90 bp GGGCACTTCTGGTGGCCAAGTACAGAAAGTCTGTGCCCCAGAAGCAGCCTGGACGCTGGGAATCAGAACTaGATCCACGCAACAATACAC +
Preference number: 4 (lower is better)
Translates to: GHFWWPSTESLCPRSSLDAGNQN*IHATIH
Trigger: GTGTATTGTTGCGTGGATTCAGTTCTGATTCCCAGC...GTCCAGGCTGCTTCTGGGGCACAGACTTTCTGTACTTGGCCACCAGAAGTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR TCA 90 bp TTCTCCAGGGCGTGCTTCAAGTGGCTGTGGTCCGGGTGGTTTTCAGGGGTGTTTCCAACCGAGACCCAGTaGCCCAACATTGTAAAGTTG +
Preference number: 4 (lower is better)
Translates to: FSRACFKWLWSGWFSGVFPTETQ*PNIVKL
Trigger: CAACTTTACAATGTTGGGTCACTGGGTCTCGGTTGG...AAACACCCCTGAAAACCACCCGGACCACAGCCACTTGAAGCACGCCCTGGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381285.8
CDS-3UTR TCA 90 bp GGGATTTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAGGAAATCCACCTGCCAGGGTaGTGCCAGCAGCCAGACAGG +
Preference number: 4 (lower is better)
Translates to: GISATLEAIMRPVVRTKEIHLPG*CQQPDR
Trigger: CCTGTCTGGCTGCTGGCATCACCCTGGCAGGTGGAT...TTCCTTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAAATCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR TCA 90 bp TACAATTTCCAGACAGCATGTGTGGCCGTGGGCTGGGACCCTGCTGAGCACACCTCAGACTATACTGTCTaGGGGCTTCATCATGCTACC +
Preference number: 4 (lower is better)
Translates to: YNFQTACVAVGWDPAEHTSDYTV*GLHHAT
Trigger: GGTAGCATGATGAAGCCCTCAGACAGTATAGTCTGA...GGTGTGCTCAGCAGGGTCCCAGCCCACGGCCACACATGCTGTCTGGAAATTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR TCA 90 bp GTTGACCAGCCAATTACTTCCTCCGTGTCAGGTCTAACCAGAAGAGGTCTGCATGAGGGAGCTGCCCCGTaGATGGCAGCTGTGGTTTCT +
Preference number: 4 (lower is better)
Translates to: VDQPITSSVSGLTRRGLHEGAAP*MAAVVS
Trigger: AGAAACCACAGCTGCCATTCACGGGGCAGCTCCCTC...ATGCAGACCTCTTCTGGTTAGACCTGACACGGAGGAAGTAATTGGCTGGTCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR GCA 90 bp CTATGGGATTTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAACCAGGGACAAATCAGTaGCGCTCACGCGCCGCTGGG +
Preference number: 4 (lower is better)
Translates to: LWDFSDPRSHNETCSEDKPGTNQ*RSRAAG
Trigger: CCCAGCGGCGCGTGAGCGGCACTGATTTGTCCCTGG...TTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAAATCCCATAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR GCA 90 bp CAACCAGATAAATCTGAGACCGAACAAAAACACAGAGTGCTTTCTCATGTGGCTCGGGCGGGTCCGCGCTaGCGCCCCAGGGACAAATCA +
Preference number: 4 (lower is better)
Translates to: QPDKSETEQKHRVLSHVARAGPR*RPRDKS
Trigger: TGATTTGTCCCTGGGGCGGCAGCGCGGACCCGCCCG...AGCCACATGAGAAAGCACTCTGTGTTTTTGTTCGGTCTCAGATTTATCTGGTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR GCA 90 bp CACCATGTGAAAGGAGAAGGACCTCTACACGACCACCAGCACAGCCTCCCGACATGTTCCAGGAGAGCTTaGCTTCGTTTCTCCAGTTCC +
Preference number: 4 (lower is better)
Translates to: HHVKGEGPLHDHQHSLPTCSRRA*LRFSSS
Trigger: GGAACTGGAGAAACGAAGGCAAGCTCTCCTGGAACA...TGTCGGGAGGCTGTGCTGGTGGTCGTGTAGAGGTCCTTCTCCTTTCACATGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR GCA 90 bp GACCGACAGGGTTTCAACTCGATGCCTTCAACCACGTTCACCATCAACCTTCCATCCTGCTCCTTGCGCTaGTGTTCCAGGAGAGCTTGC +
Preference number: 4 (lower is better)
Translates to: DRQGFNSMPSTTFTINLPSCSLR*CSRRAC
Trigger: GCAAGCTCTCCTGGAACAGCAGCGCAAGGAGCAGGA...TGGAAGGTTGATGGTGAACGTGGTTGAAGGCATCGAGTTGAAACCCTGTCGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381285.8
CDS-3UTR GCA 90 bp TATGGGATTTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAGTGGGCCAGGCGCTCCTaGTCCTTGCGCTGCTGTTCC +
Preference number: 4 (lower is better)
Translates to: YGISATLEAIMRPVVRTKWARRS*SLRCCS
Trigger: GGAACAGCAGCGCAAGGAGCAGGAGCGCCTGGCCCA...CTTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAAATCCCATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR GCA 90 bp AGTTTGGGGGCAGGGGCAGATGTTGAATCAGTCACTGGTTTCACTGGAGCGGGACGTTCTAGCTCCCGCTaGTTTTCCAGTTGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: SLGAGADVESVTGFTGAGRSSSR*FSSCFS
Trigger: GGAGAAGCAACTGGAAAAGCAGCGGGAGCTAGAACG...TCCCGCTCCAGTGAAACCAGTGACTGATTCAACATCTGCCCCTGCCCCCAAACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000379960.9
CDS-3UTR GCA 90 bp AAGGGGCTAGACTCCCAGCTGCACCCTGTTGAGGGCTATGGGATTTCAGCGACCAGTTGGTCTCGTAGGTaGTGCCGAGCTAGTTCTTTT +
Preference number: 4 (lower is better)
Translates to: KGLDSQLHPVEGYGISATSWSRR*CRASSF
Trigger: AAAAGAACTAGCTCGGCAGCACCTACGAGACCAACT...GGTCGCTGAAATCCCATAGCCCTCAACAGGGTGCAGCTGGGAGTCTAGCCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR GCA 90 bp CTGCACCATGTGAAAGGAGAAGGACCTCTACACGACCACCAGCACAGCCTCCCGAGTTGGTCTCGTAGGTaGTGCCGAGCTAGTTCTTTT +
Preference number: 4 (lower is better)
Translates to: LHHVKGEGPLHDHQHSLPSWSRR*CRASSF
Trigger: AAAAGAACTAGCTCGGCAGCACCTACGAGACCAACT...CGGGAGGCTGTGCTGGTGGTCGTGTAGAGGTCCTTCTCCTTTCACATGGTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR GCA 90 bp AAAGCTGATGCAGAAAGGGTGGGAAGCCTGAGGACCTCCGTGCAGCCCCAGCCTTTCAAAGGGGTACAGTaGCCGGTAATACACCACTTT +
Preference number: 4 (lower is better)
Translates to: KADAERVGSLRTSVQPQPFKGVQ*PVIHHF
Trigger: AAAGTGGTGTATTACCGGGCACTGTACCCCTTTGAA...AGGCTGGGGCTGCACGGAGGTCCTCAGGCTTCCCACCCTTTCTGCATCAGCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR GCA 90 bp CTTAACTGGCCGGCACTTGGAACGGTGAGAGAGGGCTGGGCTGCCCATGCATCCTTCTGGGATTTTCTCTaGATAGTTTGCAGGGAACCA +
Preference number: 4 (lower is better)
Translates to: LNWPALGTVREGWAAHASFWDFL*IVCREP
Trigger: TGGTTCCCTGCAAACTATGCAGAGAAAATCCCAGAA...GGATGCATGGGCAGCCCAGCCCTCTCTCACCGTTCCAAGTGCCGGCCAGTTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379960.9
ENST00000419241.1
CDS-3UTR GCA 90 bp CACCATGTGAAAGGAGAAGGACCTCTACACGACCACCAGCACAGCCTCCCGACATTTTTCCCACGTGCTTaGAGCTCTCCTTCCCACCAT +
Preference number: 4 (lower is better)
Translates to: HHVKGEGPLHDHQHSLPTFFPRA*SSPSHH
Trigger: ATGGTGGGAAGGAGAGCTGCAAGCACGTGGGAAAAA...TGTCGGGAGGCTGTGCTGGTGGTCGTGTAGAGGTCCTTCTCCTTTCACATGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR GCA 90 bp GTTTCTAAACTCACACCAAGGACTGGGCATTGTAGGCCAAGAAGTCTACTTGGGGCCTCATCCGTCTTCTaGTGGATCAGGGCAGCCCCG +
Preference number: 4 (lower is better)
Translates to: VSKLTPRTGHCRPRSLLGASSVF*WIRAAP
Trigger: CGGGGCTGCCCTGATCCAGCAGAAGACGGATGAGGC...CCCAAGTAGACTTCTTGGCCTACAATGCCCAGTCCTTGGTGTGAGTTTAGAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000381318.8
CDS-3UTR GCA 90 bp GAAGGAACGGCTATAACGGTGCACATGCTGGAAACTTCCATAGACCAGCTCTTCGCCTTCTCCAGGGCGTaGTTCAAGTGGCTGTGGTCC +
Preference number: 4 (lower is better)
Translates to: EGTAITVHMLETSIDQLFAFSRA*FKWLWS
Trigger: GGACCACAGCCACTTGAAGCACGCCCTGGAGAAGGC...GAAGAGCTGGTCTATGGAAGTTTCCAGCATGTGCACCGTTATAGCCGTTCCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000381318.8
CDS-3UTR GCA 90 bp AAGGGGCTAGACTCCCAGCTGCACCCTGTTGAGGGCTATGGGATTTCAGCGACCGCAGCTTTGATTTTCTaGACCCAGGCAGTCCTTTCA +
Preference number: 4 (lower is better)
Translates to: KGLDSQLHPVEGYGISATAALIF*TQAVLS
Trigger: TGAAAGGACTGCCTGGGTGCAGAAAATCAAAGCTGC...GGTCGCTGAAATCCCATAGCCCTCAACAGGGTGCAGCTGGGAGTCTAGCCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR GCA 90 bp CAGCCAGAGGGCATCGTTCTAAGGAAGGAGAGTCAGGGCCTGTTTGGGGTTGGTGCAAAGGAGGTACTCTaGCACAACGCTGATGCTATC +
Preference number: 4 (lower is better)
Translates to: QPEGIVLRKESQGLFGVGAKEVL*HNADAI
Trigger: GATAGCATCAGCGTTGTGGCAGAGTACCTCCTTTGC...ACCAACCCCAAACAGGCCCTGACTCTCCTTCCTTAGAACGATGCCCTCTGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR GCA 90 bp TACAATTTCCAGACAGCATGTGTGGCCGTGGGCTGGGACCCTGCTGAGCACACCATATCACCTCATGAGTaGAGCCTGACGGACAAGGAA +
Preference number: 4 (lower is better)
Translates to: YNFQTACVAVGWDPAEHTISPHE*SLTDKE
Trigger: TTCCTTGTCCGTCAGGCTGCACTCATGAGGTGATAT...GGTGTGCTCAGCAGGGTCCCAGCCCACGGCCACACATGCTGTCTGGAAATTGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR GCA 90 bp GCTTTGAGGGGCCTGTCTTTGCCATCCCATATCCCTGTGACTGAATACCAAATGCAGAATGGCAGCGGCTaGTGCTCACCCAACGCTGCA +
Preference number: 4 (lower is better)
Translates to: ALRGLSLPSHIPVTEYQMQNGSG*CSPNAA
Trigger: TGCAGCGTTGGGTGAGCAGCAGCCGCTGCCATTCTG...CATTTGGTATTCAGTCACAGGGATATGGGATGGCAAAGACAGGCCCCTCAAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR GCA 90 bp CTTCTAGAACTTGAGGCTACTTACACAGAGGGATCTTTTCTCTCCTACCATCCCCCAGGTCACCTGCCCTaGAGTCCACCCAGCCGACAG +
Preference number: 4 (lower is better)
Translates to: LLELEATYTEGSFLSYHPPGHLP*SPPSRQ
Trigger: CTGTCGGCTGGGTGGACTGCAGGGCAGGTGACCTGG...GGGATGGTAGGAGAGAAAAGATCCCTCTGTGTAAGTAGCCTCAAGTTCTAGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR GCA 90 bp CAGCCAGAGGGCATCGTTCTAAGGAAGGAGAGTCAGGGCCTGTTTGGGGTTGGTCACGCACTGAGCTGCTaGGTCCCACCAACAAAAATT +
Preference number: 4 (lower is better)
Translates to: QPEGIVLRKESQGLFGVGHALSC*VPPTKI
Trigger: AATTTTTGTTGGTGGGACGCAGCAGCTCAGTGCGTG...ACCAACCCCAAACAGGCCCTGACTCTCCTTCCTTAGAACGATGCCCTCTGGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR GCA 90 bp ATTGTTTCGGGGCAGGGAGGATTGTCGAGAATGATTCCTAGGAGCTTTGAGGGGGTAAAGGCTCACAGCTaGTTGACGCCCTGTGGCCCA +
Preference number: 4 (lower is better)
Translates to: IVSGQGGLSRMIPRSFEGVKAHS*LTPCGP
Trigger: TGGGCCACAGGGCGTCAAGCAGCTGTGAGCCTTTAC...CCCCTCAAAGCTCCTAGGAATCATTCTCGACAATCCTCCCTGCCCCGAAACAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR GCA 90 bp ACGCTATTAATGAAATGCCCCTGGAGAACACTTGCAGAACTTCCCGTAGTCCGGAGCTTCATGGTCAGCTaGCTCCCGGGGCCATGGTCT +
Preference number: 4 (lower is better)
Translates to: TLLMKCPWRTLAELPVVRSFMVS*LPGPWS
Trigger: AGACCATGGCCCCGGGAGGCAGCTGACCATGAAGCT...CCGGACTACGGGAAGTTCTGCAAGTGTTCTCCAGGGGCATTTCATTAATAGCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR GCA 90 bp GTTGACCAGCCAATTACTTCCTCCGTGTCAGGTCTAACCAGAAGAGGTCTGCATGCAGTATTTCCAGGCTaGCAGGGGAGGCTGGACTCC +
Preference number: 4 (lower is better)
Translates to: VDQPITSSVSGLTRRGLHAVFPG*QGRLDS
Trigger: GGAGTCCAGCCTCCCCTGGCAGCCTGGAAATACTGC...ATGCAGACCTCTTCTGGTTAGACCTGACACGGAGGAAGTAATTGGCTGGTCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR GCA 90 bp GTTTCTAAACTCACACCAAGGACTGGGCATTGTAGGCCAAGAAGTCTACTTGGGCACTCACAGCCCTCTTaGCACCCCAGCCAGAGGGCA +
Preference number: 4 (lower is better)
Translates to: VSKLTPRTGHCRPRSLLGHSQPS*HPSQRA
Trigger: TGCCCTCTGGCTGGGGTGGCAAGAGGGCTGTGAGTG...CCCAAGTAGACTTCTTGGCCTACAATGCCCAGTCCTTGGTGTGAGTTTAGAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR GCA 90 bp CACCATGTGAAAGGAGAAGGACCTCTACACGACCACCAGCACAGCCTCCCGACACTGCCCCATTTTCTGTaGTGTGAGCAGCAGGCATTT +
Preference number: 4 (lower is better)
Translates to: HHVKGEGPLHDHQHSLPTLPHFL*CEQQAF
Trigger: AAATGCCTGCTGCTCACAGCACAGAAAATGGGGCAG...TGTCGGGAGGCTGTGCTGGTGGTCGTGTAGAGGTCCTTCTCCTTTCACATGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CCA 90 bp CTGCACCATGTGAAAGGAGAAGGACCTCTACACGACCACCAGCACAGCCTCCCGGCCACCAAAAGGTGTTaGAAACTGAGCCATGGTTCT +
Preference number: 4 (lower is better)
Translates to: LHHVKGEGPLHDHQHSLPATKRC*KLSHGS
Trigger: AGAACCATGGCTCAGTTTCCAACACCTTTTGGTGGC...CGGGAGGCTGTGCTGGTGGTCGTGTAGAGGTCCTTCTCCTTTCACATGGTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CCA 90 bp CTGCACCATGTGAAAGGAGAAGGACCTCTACACGACCACCAGCACAGCCTCCCGTTTCCTCTACAGTTATaGCCCAGATATCCAGGCTGC +
Preference number: 4 (lower is better)
Translates to: LHHVKGEGPLHDHQHSLPFPLQL*PRYPGC
Trigger: GCAGCCTGGATATCTGGGCCATAACTGTAGAGGAAA...CGGGAGGCTGTGCTGGTGGTCGTGTAGAGGTCCTTCTCCTTTCACATGGTGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CCA 90 bp ACTGAAGTGCAACTGAACGAGGAGGAGAGGTCCTCGCTCTCTGCACCATGTGAAGGATCCCATTGGCACTaGAGCAACAGCTGTAAGCGG +
Preference number: 4 (lower is better)
Translates to: TEVQLNEEERSSLSAPCEGSHWH*SNSCKR
Trigger: CCGCTTACAGCTGTTGCTCCAGTGCCAATGGGATCC...TTCACATGGTGCAGAGAGCGAGGACCTCTCCTCCTCGTTCAGTTGCACTTCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CCA 90 bp ACTGAAGTGCAACTGAACGAGGAGGAGAGGTCCTCGCTCTCTGCACCATGTGAAGGGGCACAGCTGCTGTaGGAACAGAAGATACTAGGG +
Preference number: 4 (lower is better)
Translates to: TEVQLNEEERSSLSAPCEGAQLL*EQKILG
Trigger: CCCTAGTATCTTCTGTTCCCACAGCAGCTGTGCCCC...TTCACATGGTGCAGAGAGCGAGGACCTCTCCTCCTCGTTCAGTTGCACTTCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CCA 90 bp GAGAGAGGGCTGGGCTGCCCATGCATCCCAGTTATCCGTTTCTGGTTTCTCATTCCACTCTGCCACTGGTaGGACACTGGCCACATCAAA +
Preference number: 4 (lower is better)
Translates to: ERGLGCPCIPVIRFWFLIPLCHW*DTGHIK
Trigger: TTTGATGTGGCCAGTGTCCCACCAGTGGCAGAGTGG...AATGAGAAACCAGAAACGGATAACTGGGATGCATGGGCAGCCCAGCCCTCTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379960.9
CDS-3UTR CCA 90 bp AAAAGGAATACAATTTCCAGACAGCATGTGTGGCCGTGGGCTGGGACCCTGCTGCAGGACAGGTGGCAGTaGTTGGCCAGACATAGCTAC +
Preference number: 4 (lower is better)
Translates to: KRNTISRQHVWPWAGTLLQDRWQ*LARHSY
Trigger: GTAGCTATGTCTGGCCAACCACTGCCACCTGTCCTG...CAGCAGGGTCCCAGCCCACGGCCACACATGCTGTCTGGAAATTGTATTCCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CCA 90 bp GTGCTGGTGGGCCACGTGGAGCTGAAGTCGGCCCAGTTATTAGGGGTCGTGGAGTCAATTTCTTGCCTTTaGGTGGTCAATCGACATCTG +
Preference number: 4 (lower is better)
Translates to: VLVGHVELKSAQLLGVVESISCL*VVNRHL
Trigger: CAGATGTCGATTGACCACCCAAAGGCAAGAAATTGA...CTCCACGACCCCTAATAACTGGGCCGACTTCAGCTCCACGTGGCCCACCAGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379960.9
CDS-3UTR CCA 90 bp AAGGGGCTAGACTCCCAGCTGCACCCTGTTGAGGGCTATGGGATTTCAGCGACCTTCGTGGAGTTTTCTTaGTCTCTGATGCTCGTCCTC +
Preference number: 4 (lower is better)
Translates to: KGLDSQLHPVEGYGISATFVEFS*SLMLVL
Trigger: GAGGACGAGCATCAGAGACCAAGAAAACTCCACGAA...GGTCGCTGAAATCCCATAGCCCTCAACAGGGTGCAGCTGGGAGTCTAGCCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CCA 90 bp AGCCTCTCCGAAGCAGGTTCCTCCCAGACACCCGCAGACCAGATCGTGTGGCCCATAGTGATTTCATCATaGCTTCTGGATTCAAAGGGG +
Preference number: 4 (lower is better)
Translates to: SLSEAGSSQTPADQIVWPIVISS*LLDSKG
Trigger: CCCCTTTGAATCCAGAAGCCATGATGAAATCACTAT...GGGCCACACGATCTGGTCTGCGGGTGTCTGGGAGGAACCTGCTTCGGAGAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CCA 90 bp GTGCTGGTGGGCCACGTGGAGCTGAAGTCGGCCCAGTTATTAGGGGTCGTGGAGACTATGTCTCCTGGCTaGATAGTGATTTCATCATGG +
Preference number: 4 (lower is better)
Translates to: VLVGHVELKSAQLLGVVETMSPG*IVISSW
Trigger: CCATGATGAAATCACTATCCAGCCAGGAGACATAGT...CTCCACGACCCCTAATAACTGGGCCGACTTCAGCTCCACGTGGCCCACCAGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379960.9
ENST00000419241.1
CDS-3UTR CCA 90 bp CGTGCTGGTGGGCCACGTGGAGCTGAAGTCGGCCCAGTTATTAGGGGTCGTGGACATGACTATGTCTCCTaGCTGGATAGTGATTTCATC +
Preference number: 4 (lower is better)
Translates to: RAGGPRGAEVGPVIRGRGHDYVS*LDSDFI
Trigger: GATGAAATCACTATCCAGCCAGGAGACATAGTCATG...TCCACGACCCCTAATAACTGGGCCGACTTCAGCTCCACGTGGCCCACCAGCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379960.9
ENST00000419241.1
CDS-3UTR CCA 90 bp TACAATTTCCAGACAGCATGTGTGGCCGTGGGCTGGGACCCTGCTGAGCACACCAGTCACTGGTTTCACTaGAGCGGGAACCTCATTTTC +
Preference number: 4 (lower is better)
Translates to: YNFQTACVAVGWDPAEHTSHWFH*SGNLIF
Trigger: GAAAATGAGGTTCCCGCTCCAGTGAAACCAGTGACT...GGTGTGCTCAGCAGGGTCCCAGCCCACGGCCACACATGCTGTCTGGAAATTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CCA 90 bp GTTTCTAAACTCACACCAAGGACTGGGCATTGTAGGCCAAGAAGTCTACTTGGGACGGTGAGAGAGGGCTaGGCTGCCCATGCATCCCAG +
Preference number: 4 (lower is better)
Translates to: VSKLTPRTGHCRPRSLLGTVREG*AAHASQ
Trigger: CTGGGATGCATGGGCAGCCCAGCCCTCTCTCACCGT...CCCAAGTAGACTTCTTGGCCTACAATGCCCAGTCCTTGGTGTGAGTTTAGAAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000381318.8
CDS-3UTR CCA 90 bp ATCAGTCACTGGTTTCACTGGAGCGGGAACCTCATTTTCTGGGATTTTCTCTGCACGGTGAGAGAGGGCTaGGCTGCCCATGCATCCCAG +
Preference number: 4 (lower is better)
Translates to: ISHWFHWSGNLIFWDFLCTVREG*AAHASQ
Trigger: CTGGGATGCATGGGCAGCCCAGCCCTCTCTCACCGT...GCAGAGAAAATCCCAGAAAATGAGGTTCCCGCTCCAGTGAAACCAGTGACTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379960.9
ENST00000419241.1
CDS-3UTR CCA 90 bp GGGATTTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAGGAAGCCAGTGGCCGTGGCTaGAGTAAAGGCGGACCTCTG +
Preference number: 4 (lower is better)
Translates to: GISATLEAIMRPVVRTKEASGRG*SKGGPL
Trigger: CAGAGGTCCGCCTTTACTCCAGCCACGGCCACTGGC...TTCCTTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAAATCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CCA 90 bp AAGGGGCTAGACTCCCAGCTGCACCCTGTTGAGGGCTATGGGATTTCAGCGACCGTTTCACGTAAGACTTaGGGAACCAACCCTTCTGAC +
Preference number: 4 (lower is better)
Translates to: KGLDSQLHPVEGYGISATVSRKT*GTNPSD
Trigger: GTCAGAAGGGTTGGTTCCCCAAGTCTTACGTGAAAC...GGTCGCTGAAATCCCATAGCCCTCAACAGGGTGCAGCTGGGAGTCTAGCCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CCA 90 bp AGCTGCTGCGTCCCACCAACAAAAATTCCCTTCCACCTAAAATTCCAGAAGTCAGCAGCCCCGTTGAGCTaGCGGCTGCAGAAGCGGATG +
Preference number: 4 (lower is better)
Translates to: SCCVPPTKIPFHLKFQKSAAPLS*RLQKRM
Trigger: CATCCGCTTCTGCAGCCGCCAGCTCAACGGGGCTGC...TGACTTCTGGAATTTTAGGTGGAAGGGAATTTTTGTTGGTGGGACGCAGCAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CCA 90 bp AGCACAGAACAGGTCACCAGCAACGACTGCTGCTATGAAATATCACAGGCCTCCTCATCCGTCTTCTGCTaGATCAGGGCAGCCCCGTTG +
Preference number: 4 (lower is better)
Translates to: STEQVTSNDCCYEISQASSSVFC*IRAAPL
Trigger: CAACGGGGCTGCCCTGATCCAGCAGAAGACGGATGA...GGAGGCCTGTGATATTTCATAGCAGCAGTCGTTGCTGGTGACCTGTTCTGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000381318.8
CDS-3UTR CCA 90 bp GACCGACAGGGTTTCAACTCGATGCCTTCAACCACGTTCACCATCAACCTTCCAAGGGCGTGCTTCAAGTaGCTGTGGTCCGGGTGGTTT +
Preference number: 4 (lower is better)
Translates to: DRQGFNSMPSTTFTINLPRACFK*LWSGWF
Trigger: AAACCACCCGGACCACAGCCACTTGAAGCACGCCCT...TGGAAGGTTGATGGTGAACGTGGTTGAAGGCATCGAGTTGAAACCCTGTCGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000420666.1
CDS-3UTR CCA 90 bp ATTGTTTCGGGGCAGGGAGGATTGTCGAGAATGATTCCTAGGAGCTTTGAGGGGAGGGCGTGCTTCAAGTaGCTGTGGTCCGGGTGGTTT +
Preference number: 4 (lower is better)
Translates to: IVSGQGGLSRMIPRSFEGRACFK*LWSGWF
Trigger: AAACCACCCGGACCACAGCCACTTGAAGCACGCCCT...CCCCTCAAAGCTCCTAGGAATCATTCTCGACAATCCTCCCTGCCCCGAAACAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CCA 90 bp AGCACAGAACAGGTCACCAGCAACGACTGCTGCTATGAAATATCACAGGCCTCCGGCACTGGGAACCCATaGTCACCTCACAGTACGGGT +
Preference number: 4 (lower is better)
Translates to: STEQVTSNDCCYEISQASGTGNP*SPHSTG
Trigger: ACCCGTACTGTGAGGTGACCATGGGTTCCCAGTGCC...GGAGGCCTGTGATATTTCATAGCAGCAGTCGTTGCTGGTGACCTGTTCTGTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000381318.8
CDS-3UTR CCA 90 bp GATGCCTTCAACCACGTTCACCATCAACCTTCCAATGCCTGTTGCCCTTTGGGAGGCACTGGGAACCCATaGTCACCTCACAGTACGGGT +
Preference number: 4 (lower is better)
Translates to: DAFNHVHHQPSNACCPLGGTGNP*SPHSTG
Trigger: ACCCGTACTGTGAGGTGACCATGGGTTCCCAGTGCC...TCCCAAAGGGCAACAGGCATTGGAAGGTTGATGGTGAACGTGGTTGAAGGCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000420666.1
CDS-3UTR CCA 90 bp TGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGGCCGTGGGCTGTGTGTGGCCGTGGGCTaGGACCCTGCTGAGCACACC +
Preference number: 4 (lower is better)
Translates to: WFLRKGIQFPDSMCGRGLCVAVG*DPAEHT
Trigger: GGTGTGCTCAGCAGGGTCCCAGCCCACGGCCACACA...CAGCCCACGGCCACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CCA 90 bp TGTCCTACAACAATCAGGATTCAGCACATTCAAGCACAGAACAGGTCACCAGCACAGCATGTGTGGCCGTaGGCTGGGACCCTGCTGAGC +
Preference number: 4 (lower is better)
Translates to: CPTTIRIQHIQAQNRSPAQHVWP*AGTLLS
Trigger: GCTCAGCAGGGTCCCAGCCCACGGCCACACATGCTG...TGCTGGTGACCTGTTCTGTGCTTGAATGTGCTGAATCCTGATTGTTGTAGGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000381318.8
CDS-3UTR CCA 90 bp CTATGGGATTTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAACAGCATGTGTGGCCGTaGGCTGGGACCCTGCTGAGC +
Preference number: 4 (lower is better)
Translates to: LWDFSDPRSHNETCSEDKQHVWP*AGTLLS
Trigger: GCTCAGCAGGGTCCCAGCCCACGGCCACACATGCTG...TTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAAATCCCATAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CCA 90 bp GGTGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGGCCGTGGGCTCCAGACAGCATGTGTaGCCGTGGGCTGGGACCCTG +
Preference number: 4 (lower is better)
Translates to: GGFLEKEYNFQTACVAVGSRQHV*PWAGTL
Trigger: CAGGGTCCCAGCCCACGGCCACACATGCTGTCTGGA...GCCCACGGCCACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CCA 90 bp CAGCCAGAGGGCATCGTTCTAAGGAAGGAGAGTCAGGGCCTGTTTGGGGTTGGTAGATTAGTCCAGGCCTaGATCCGAATGAGCCACATC +
Preference number: 4 (lower is better)
Translates to: QPEGIVLRKESQGLFGVGRLVQA*IRMSHI
Trigger: GATGTGGCTCATTCGGATCCAGGCCTGGACTAATCT...ACCAACCCCAAACAGGCCCTGACTCTCCTTCCTTAGAACGATGCCCTCTGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CCA 90 bp ACGCTATTAATGAAATGCCCCTGGAGAACACTTGCAGAACTTCCCGTAGTCCGGGTCCTAGCCAGTTCCTaGAGAGACAGCCGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: TLLMKCPWRTLAELPVVRVLASS*RDSRPA
Trigger: AGCAGGCCGGCTGTCTCTCCAGGAACTGGCTAGGAC...CCGGACTACGGGAAGTTCTGCAAGTGTTCTCCAGGGGCATTTCATTAATAGCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CCA 90 bp AAAAGGAATACAATTTCCAGACAGCATGTGTGGCCGTGGGCTGGGACCCTGCTGGAGCTGCCCCGTGAATaGCAGCTGTGGTTTCTTTGC +
Preference number: 4 (lower is better)
Translates to: KRNTISRQHVWPWAGTLLELPRE*QLWFLC
Trigger: GCAAAGAAACCACAGCTGCCATTCACGGGGCAGCTC...CAGCAGGGTCCCAGCCCACGGCCACACATGCTGTCTGGAAATTGTATTCCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CCA 90 bp TTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAGGAAAACACTGGGCAGGGAGGCACTaGCTCCGCAGACTCCCCTTC +
Preference number: 4 (lower is better)
Translates to: FSDPRSHNETCSEDKGKHWAGRH*LRRLPF
Trigger: GAAGGGGAGTCTGCGGAGCCAGTGCCTCCCTGCCCA...GTGTTTTCCTTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR CAA 72 bp AAGTGTCTTAGGTCTTTGCCCCGGGATGTGCGGGGCTaGCATCCTCCTAGGGTCTTTCACCCACCACATAAT +
Preference number: 4 (lower is better)
Translates to: KCLRSLPRDVRG*HPPRVFHPPHN
Trigger: ATTATGTGGTGGGTGAAAGACCCTAGGAGGATGCAAGCCCCGCACATCCCGGGGCAAAGACCTAAGACACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381318.8
3UTR CAA 72 bp CTTCAACCACGTTCACCATCAACCTTCCAATGCCTGTaGCCCTTTGGGAACGGACCAGGTACGCTTTCTCGC +
Preference number: 4 (lower is better)
Translates to: LQPRSPSTFQCL*PFGNGPGTLSR
Trigger: GCGAGAAAGCGTACCTGGTCCGTTCCCAAAGGGCAACAGGCATTGGAAGGTTGATGGTGAACGTGGTTGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000420666.1
CDS-3UTR TCA 90 bp CAGCCAGAGGGCATCGTTCTAAGGAAGGAGAGTCAGGGCCTGTTTGGGGTTGGTCATATTGAAGCCAGCTaGGCCTGTGGTAAACTTGAC +
Preference number: 4 (lower is better)
Translates to: QPEGIVLRKESQGLFGVGHIEAS*ACGKLD
Trigger: GTCAAGTTTACCACAGGCTCAGCTGGCTTCAATATG...ACCAACCCCAAACAGGCCCTGACTCTCCTTCCTTAGAACGATGCCCTCTGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR TCA 90 bp TACAATTTCCAGACAGCATGTGTGGCCGTGGGCTGGGACCCTGCTGAGCACACCCAGATGTTGAGCTTATaGCAGATATACCACTGCCAG +
Preference number: 4 (lower is better)
Translates to: YNFQTACVAVGWDPAEHTQMLSL*QIYHCQ
Trigger: CTGGCAGTGGTATATCTGTCATAAGCTCAACATCTG...GGTGTGCTCAGCAGGGTCCCAGCCCACGGCCACACATGCTGTCTGGAAATTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR TCA 90 bp CACCATGTGAAAGGAGAAGGACCTCTACACGACCACCAGCACAGCCTCCCGACATCCTCTGGTAGCCTCTaGTCTACAGATGTTGAGCTT +
Preference number: 4 (lower is better)
Translates to: HHVKGEGPLHDHQHSLPTSSGSL*STDVEL
Trigger: AAGCTCAACATCTGTAGATCAGAGGCTACCAGAGGA...TGTCGGGAGGCTGTGCTGGTGGTCGTGTAGAGGTCCTTCTCCTTTCACATGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR TCA 90 bp ATTGTTTCGGGGCAGGGAGGATTGTCGAGAATGATTCCTAGGAGCTTTGAGGGGGCTGGTTCTTGGTGTTaGTGGAAAAGCCGACCCAGC +
Preference number: 4 (lower is better)
Translates to: IVSGQGGLSRMIPRSFEGAGSWC*WKSRPS
Trigger: GCTGGGTCGGCTTTTCCATCAACACCAAGAACCAGC...CCCCTCAAAGCTCCTAGGAATCATTCTCGACAATCCTCCCTGCCCCGAAACAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR TCA 90 bp GTTGACCAGCCAATTACTTCCTCCGTGTCAGGTCTAACCAGAAGAGGTCTGCATGGTCGTGGAGGGCTCTaGAGAGGTTACTGCCAAAGG +
Preference number: 4 (lower is better)
Translates to: VDQPITSSVSGLTRRGLHGRGGL*RGYCQR
Trigger: CCTTTGGCAGTAACCTCTTCAGAGCCCTCCACGACC...ATGCAGACCTCTTCTGGTTAGACCTGACACGGAGGAAGTAATTGGCTGGTCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR TCA 90 bp GATAAATCTGAGACCGAACAAAAACACAGAGTGCTTTCTCATGTGGCTACAAGGCGGCACTTGGAACGGTaGGAGAGGGCTGGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: DKSETEQKHRVLSHVATRRHLER*ERAGLP
Trigger: GGGCAGCCCAGCCCTCTCTCACCGTTCCAAGTGCCG...CCTTGTAGCCACATGAGAAAGCACTCTGTGTTTTTGTTCGGTCTCAGATTTATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR TCA 90 bp AAGGGGCTAGACTCCCAGCTGCACCCTGTTGAGGGCTATGGGATTTCAGCGACCTTATGGGCCCTGAAATaGGTTTCACGTAAGACTTGG +
Preference number: 4 (lower is better)
Translates to: KGLDSQLHPVEGYGISATLWALK*VSRKTW
Trigger: CCAAGTCTTACGTGAAACTCATTTCAGGGCCCATAA...GGTCGCTGAAATCCCATAGCCCTCAACAGGGTGCAGCTGGGAGTCTAGCCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381318.8
ENST00000399367.7
CDS-3UTR TCA 90 bp CTGCACCATGTGAAAGGAGAAGGACCTCTACACGACCACCAGCACAGCCTCCCGTTATGGGCCCTGAAATaGGTTTCACGTAAGACTTGG +
Preference number: 4 (lower is better)
Translates to: LHHVKGEGPLHDHQHSLPLWALK*VSRKTW
Trigger: CCAAGTCTTACGTGAAACTCATTTCAGGGCCCATAA...CGGGAGGCTGTGCTGGTGGTCGTGTAGAGGTCCTTCTCCTTTCACATGGTGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR TCA 90 bp GGGCACTTCTGGTGGCCAAGTACAGAAAGTCTGTGCCCCAGAAGCAGCCTGGACCTTCCTTATGGGCCCTaGAATGAGTTTCACGTAAGA +
Preference number: 4 (lower is better)
Translates to: GHFWWPSTESLCPRSSLDLPYGP*NEFHVR
Trigger: TCTTACGTGAAACTCATTTCAGGGCCCATAAGGAAG...GTCCAGGCTGCTTCTGGGGCACAGACTTTCTGTACTTGGCCACCAGAAGTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR TCA 90 bp CTGCACCATGTGAAAGGAGAAGGACCTCTACACGACCACCAGCACAGCCTCCCGCTTCCTTATGGGCCCTaGAATGAGTTTCACGTAAGA +
Preference number: 4 (lower is better)
Translates to: LHHVKGEGPLHDHQHSLPLPYGP*NEFHVR
Trigger: TCTTACGTGAAACTCATTTCAGGGCCCATAAGGAAG...CGGGAGGCTGTGCTGGTGGTCGTGTAGAGGTCCTTCTCCTTTCACATGGTGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR TCA 90 bp TACAATTTCCAGACAGCATGTGTGGCCGTGGGCTGGGACCCTGCTGAGCACACCAGTTCCAGAGCCCTCTaGATCTTTAAGCCTCACATA +
Preference number: 4 (lower is better)
Translates to: YNFQTACVAVGWDPAEHTSSRAL*IFKPHI
Trigger: TATGTGAGGCTTAAAGATTCAGAGGGCTCTGGAACT...GGTGTGCTCAGCAGGGTCCCAGCCCACGGCCACACATGCTGTCTGGAAATTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR TCA 90 bp GTTCACCATCAACCTTCCAATGCCTGTTGCCCTTTGGGAACGGACCAGGTACGCGTTCAGAAGCAGCTTTaGTTTTCTGCACCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: VHHQPSNACCPLGTDQVRVQKQL*FSAPRQ
Trigger: CTGCCTGGGTGCAGAAAATCAAAGCTGCTTCTGAAC...GCGTACCTGGTCCGTTCCCAAAGGGCAACAGGCATTGGAAGGTTGATGGTGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000420666.1
CDS-3UTR TCA 90 bp TCTTTCCATGTGACCGACAGGGTTTCAACTCGATGCCTTCAACCACGTTCACCACCTGGATCGTCTTGGTaGTGTGGCACTGGGAACCCA +
Preference number: 4 (lower is better)
Translates to: SFHVTDRVSTRCLQPRSPPGSSW*CGTGNP
Trigger: TGGGTTCCCAGTGCCACATCACCAAGACGATCCAGG...TGGTGAACGTGGTTGAAGGCATCGAGTTGAAACCCTGTCGGTCACATGGAAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000420666.1
CDS-3UTR TCA 90 bp TCGATGCCTTCAACCACGTTCACCATCAACCTTCCAATGCCTGTTGCCCTTTGGCCCTCTCGAACACAGTaGTGCAGAGGACTTCCTGCT +
Preference number: 4 (lower is better)
Translates to: SMPSTTFTINLPMPVALWPSRTQ*CRGLPA
Trigger: AGCAGGAAGTCCTCTGCATCACTGTGTTCGAGAGGG...CCAAAGGGCAACAGGCATTGGAAGGTTGATGGTGAACGTGGTTGAAGGCATCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381285.8
CDS-3UTR TCA 90 bp GTCCCTCTCGAACACAGTGATGCAGAGGACTTCCTGCTCCAGGTCTCGGATGAACAACGACTGCTGCTATaGAATATCACAGGCCTCCGA +
Preference number: 4 (lower is better)
Translates to: VPLEHSDAEDFLLQVSDEQRLLL*NITGLR
Trigger: TCGGAGGCCTGTGATATTTCATAGCAGCAGTCGTTG...TTCATCCGAGACCTGGAGCAGGAAGTCCTCTGCATCACTGTGTTCGAGAGGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381285.8
CDS-3UTR TCA 90 bp CTTCTAGAACTTGAGGCTACTTACACAGAGGGATCTTTTCTCTCCTACCATCCCAGGCTCACAGCTGCTTaGCGCCCTGTGGCCCATCCT +
Preference number: 4 (lower is better)
Translates to: LLELEATYTEGSFLSYHPRLTAA*RPVAHP
Trigger: AGGATGGGCCACAGGGCGTCAAGCAGCTGTGAGCCT...GGGATGGTAGGAGAGAAAAGATCCCTCTGTGTAAGTAGCCTCAAGTTCTAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR TCA 90 bp ACTGAAGTGCAACTGAACGAGGAGGAGAGGTCCTCGCTCTCTGCACCATGTGAAGCTCTCTGCACCATGTaGAAGGAGAAGGACCTCTAC +
Preference number: 4 (lower is better)
Translates to: TEVQLNEEERSSLSAPCEALCTM*KEKDLY
Trigger: GTAGAGGTCCTTCTCCTTTCACATGGTGCAGAGAGC...TTCACATGGTGCAGAGAGCGAGGACCTCTCCTCCTCGTTCAGTTGCACTTCAGT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR GCA 90 bp TACAATTTCCAGACAGCATGTGTGGCCGTGGGCTGGGACCCTGCTGAGCACACCGAAATAGCAACTGGTTaGTGTTTCATGACAGGGGGA +
Preference number: 4 (lower is better)
Translates to: YNFQTACVAVGWDPAEHTEIATG*CFMTGG
Trigger: TCCCCCTGTCATGAAACAGCAACCAGTTGCTATTTC...GGTGTGCTCAGCAGGGTCCCAGCCCACGGCCACACATGCTGTCTGGAAATTGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR GCA 90 bp CTGCACCATGTGAAAGGAGAAGGACCTCTACACGACCACCAGCACAGCCTCCCGCATACCAAATGCTGGTaGGCTAGAAATAGCAACTGG +
Preference number: 4 (lower is better)
Translates to: LHHVKGEGPLHDHQHSLPHTKCW*ARNSNW
Trigger: CCAGTTGCTATTTCTAGCGCACCAGCATTTGGTATG...CGGGAGGCTGTGCTGGTGGTCGTGTAGAGGTCCTTCTCCTTTCACATGGTGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR GCA 90 bp GCTTTGAGGGGCCTGTCTTTGCCATCCCATATCCCTGTGACTGAATACCAAATGTCCTGCTCCTTGCGCTaGTGTTCCAGGAGAGCTTGC +
Preference number: 4 (lower is better)
Translates to: ALRGLSLPSHIPVTEYQMSCSLR*CSRRAC
Trigger: GCAAGCTCTCCTGGAACAGCAGCGCAAGGAGCAGGA...CATTTGGTATTCAGTCACAGGGATATGGGATGGCAAAGACAGGCCCCTCAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR GCA 90 bp ACTGAAGTGCAACTGAACGAGGAGGAGAGGTCCTCGCTCTCTGCACCATGTGAACGTTCTAGCTCCCGCTaGTTTTCCAGTTGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: TEVQLNEEERSSLSAPCERSSSR*FSSCFS
Trigger: GGAGAAGCAACTGGAAAAGCAGCGGGAGCTAGAACG...TTCACATGGTGCAGAGAGCGAGGACCTCTCCTCCTCGTTCAGTTGCACTTCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR GCA 90 bp GGTGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGGCCGTGGGCCTCTCCTCCTCTCTCTaGCGTTCTAGCTCCCGCTGC +
Preference number: 4 (lower is better)
Translates to: GGFLEKEYNFQTACVAVGLSSSL*RSSSRC
Trigger: GCAGCGGGAGCTAGAACGGCAGAGAGAGGAGGAGAG...GCCCACGGCCACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR GCA 90 bp GGTGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGGCCGTGGGCTGCTCGTCCTCCTGCTaGACATGCTCCAGCCACTGC +
Preference number: 4 (lower is better)
Translates to: GGFLEKEYNFQTACVAVGCSSSC*TCSSHC
Trigger: GCAGTGGCTGGAGCATGTGCAGCAGGAGGACGAGCA...GCCCACGGCCACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR GCA 90 bp GGAAGAGAAGCACAATCCGGGGCTGCATGTGGCCTAGTCTCATGGAGGGGTGGATTTCTCTGCATAGTTTaGAGGGAACCACCCTGTCTT +
Preference number: 4 (lower is better)
Translates to: GREAQSGAACGLVSWRGGFLCIV*REPPCL
Trigger: AAGACAGGGTGGTTCCCTGCAAACTATGCAGAGAAA...TCCACCCCTCCATGAGACTAGGCCACATGCAGCCCCGGATTGTGCTTCTCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419241.1
CDS-3UTR GCA 90 bp GTTGACCAGCCAATTACTTCCTCCGTGTCAGGTCTAACCAGAAGAGGTCTGCATCTGGTTTCTCATTCGTaGTGGTGGGCCACGTGGAGC +
Preference number: 4 (lower is better)
Translates to: VDQPITSSVSGLTRRGLHLVSHS*WWATWS
Trigger: GCTCCACGTGGCCCACCAGCACGAATGAGAAACCAG...ATGCAGACCTCTTCTGGTTAGACCTGACACGGAGGAAGTAATTGGCTGGTCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR GCA 90 bp GAAGGAACGGCTATAACGGTGCACATGCTGGAAACTTCCATAGACCAGCTCTTCGGGCTGGGCTGCCCATaGATCCCAGTTATCCGTTTC +
Preference number: 4 (lower is better)
Translates to: EGTAITVHMLETSIDQLFGLGCP*IPVIRF
Trigger: GAAACGGATAACTGGGATGCATGGGCAGCCCAGCCC...GAAGAGCTGGTCTATGGAAGTTTCCAGCATGTGCACCGTTATAGCCGTTCCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000381318.8
CDS-3UTR GCA 90 bp GAAACTTCCATAGACCAGCTCTTCAAAGAGCTAAGCCAGGGCCTGATCAGACCGGCGCTTTTTCCCACGTaGTTGCAGCTCTCCTTCCCA +
Preference number: 4 (lower is better)
Translates to: ETSIDQLFKELSQGLIRPALFPT*LQLSFP
Trigger: TGGGAAGGAGAGCTGCAAGCACGTGGGAAAAAGCGC...CGGTCTGATCAGGCCCTGGCTTAGCTCTTTGAAGAGCTGGTCTATGGAAGTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000381318.8
CDS-3UTR GCA 90 bp ATTGTTTCGGGGCAGGGAGGATTGTCGAGAATGATTCCTAGGAGCTTTGAGGGGCATGTGCGGCAGCTGTaGGCTCAGGATGTCTCCAAT +
Preference number: 4 (lower is better)
Translates to: IVSGQGGLSRMIPRSFEGHVRQL*AQDVSN
Trigger: ATTGGAGACATCCTGAGCGCACAGCTGCCGCACATG...CCCCTCAAAGCTCCTAGGAATCATTCTCGACAATCCTCCCTGCCCCGAAACAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR GCA 90 bp TGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGGCCGTGGGCTGGCCTCATCCGTCTTCTaGTGGATCAGGGCAGCCCCG +
Preference number: 4 (lower is better)
Translates to: WFLRKGIQFPDSMCGRGLASSVF*WIRAAP
Trigger: CGGGGCTGCCCTGATCCAGCAGAAGACGGATGAGGC...CAGCCCACGGCCACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR GCA 90 bp ACGCTATTAATGAAATGCCCCTGGAGAACACTTGCAGAACTTCCCGTAGTCCGGAGTGTCTTAGGTCTTTaGCCCGGGATGTGCGGGGCT +
Preference number: 4 (lower is better)
Translates to: TLLMKCPWRTLAELPVVRSVLGL*PGMCGA
Trigger: AGCCCCGCACATCCCGGGGCAAAGACCTAAGACACT...CCGGACTACGGGAAGTTCTGCAAGTGTTCTCCAGGGGCATTTCATTAATAGCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR GCA 90 bp GTTTCTAAACTCACACCAAGGACTGGGCATTGTAGGCCAAGAAGTCTACTTGGGTGCTGTCCATCCACCTaGCAGGGTGATGCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: VSKLTPRTGHCRPRSLLGCCPST*QGDASS
Trigger: GCTGCTGGCATCACCCTGGCAGGTGGATGGACAGCA...CCCAAGTAGACTTCTTGGCCTACAATGCCCAGTCCTTGGTGTGAGTTTAGAAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR GCA 90 bp ATTGTTTCGGGGCAGGGAGGATTGTCGAGAATGATTCCTAGGAGCTTTGAGGGGGGGATTACAGGTGCCTaGCACCACCCCTGGCTAATT +
Preference number: 4 (lower is better)
Translates to: IVSGQGGLSRMIPRSFEGGITGA*HHPWLI
Trigger: AATTAGCCAGGGGTGGTGGCAGGCACCTGTAATCCC...CCCCTCAAAGCTCCTAGGAATCATTCTCGACAATCCTCCCTGCCCCGAAACAAT
53% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR GCA 90 bp AGCTGCTGCGTCCCACCAACAAAAATTCCCTTCCACCTAAAATTCCAGAAGTCAGCAATGCCTAGCAGCTaGGGTAGGTGGAGCCGGCAC +
Preference number: 4 (lower is better)
Translates to: SCCVPPTKIPFHLKFQKSAMPSS*GRWSRH
Trigger: GTGCCGGCTCCACCTACCGCAGCTGCTAGGCATTGC...TGACTTCTGGAATTTTAGGTGGAAGGGAATTTTTGTTGGTGGGACGCAGCAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR GCA 90 bp AGCACAGAACAGGTCACCAGCAACGACTGCTGCTATGAAATATCACAGGCCTCCCACCACGCACTGAGCTaGTGCGTCCCACCAACAAAA +
Preference number: 4 (lower is better)
Translates to: STEQVTSNDCCYEISQASHHALS*CVPPTK
Trigger: TTTTGTTGGTGGGACGCAGCAGCTCAGTGCGTGGTG...GGAGGCCTGTGATATTTCATAGCAGCAGTCGTTGCTGGTGACCTGTTCTGTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR GCA 90 bp ACAGAATCCTCCTTAGGTGGCCTAAGGGGCACTTCTGGTGGCCAAGTACAGAAACAGCTTGCCACAGCCTaGCGGGAGACCTTTCAAAGT +
Preference number: 4 (lower is better)
Translates to: TESSLGGLRGTSGGQVQKQLATA*RETFQS
Trigger: ACTTTGAAAGGTCTCCCGGCAGGCTGTGGCAAGCTG...TTTCTGTACTTGGCCACCAGAAGTGCCCCTTAGGCCACCTAAGGAGGATTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR GCA 90 bp GCTGCAGCAGCGGACTGTAAGTTTCTTCCTTTTCCCCTGACTGGCGGCCTGCATACCTCCAAATGCTGGTaGGCTAGAAATAGCAACTGG +
Preference number: 4 (lower is better)
Translates to: AAAADCKFLPFPLTGGLHTSKCW*ARNSNW
Trigger: CCAGTTGCTATTTCTAGCGCACCAGCATTTGGAGGT...ATGCAGGCCGCCAGTCAGGGGAAAAGGAAGAAACTTACAGTCCGCTGCTGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456489.1
CDS-3UTR CCA 90 bp CACCATGTGAAAGGAGAAGGACCTCTACACGACCACCAGCACAGCCTCCCGACATTTCCTCTACAGTTATaGCCCAGATATCCAGGCTGC +
Preference number: 4 (lower is better)
Translates to: HHVKGEGPLHDHQHSLPTFPLQL*PRYPGC
Trigger: GCAGCCTGGATATCTGGGCCATAACTGTAGAGGAAA...TGTCGGGAGGCTGTGCTGGTGGTCGTGTAGAGGTCCTTCTCCTTTCACATGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CCA 90 bp AAAGCTGATGCAGAAAGGGTGGGAAGCCTGAGGACCTCCGTGCAGCCCCAGCCTGCTAGAAATAGCAACTaGTTGCTGTTTCATGACAGG +
Preference number: 4 (lower is better)
Translates to: KADAERVGSLRTSVQPQPARNSN*LLFHDR
Trigger: CCTGTCATGAAACAGCAACCAGTTGCTATTTCTAGC...AGGCTGGGGCTGCACGGAGGTCCTCAGGCTTCCCACCCTTTCTGCATCAGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CCA 90 bp GAAACTTCCATAGACCAGCTCTTCAAAGAGCTAAGCCAGGGCCTGATCAGACCGCAGGACAGGTGGCAGTaGTTGGCCAGACATAGCTAC +
Preference number: 4 (lower is better)
Translates to: ETSIDQLFKELSQGLIRPQDRWQ*LARHSY
Trigger: GTAGCTATGTCTGGCCAACCACTGCCACCTGTCCTG...CGGTCTGATCAGGCCCTGGCTTAGCTCTTTGAAGAGCTGGTCTATGGAAGTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000381318.8
CDS-3UTR CCA 90 bp AACCACGTTCACCATCAACCTTCCAATGCCTGTTGCCCTTTGGGAACGGACCAGTCCACTTCATCCAGTTaGTCTCGTAGGTGCTGCCGA +
Preference number: 4 (lower is better)
Translates to: NHVHHQPSNACCPLGTDQSTSSS*SRRCCR
Trigger: TCGGCAGCACCTACGAGACCAACTGGATGAAGTGGA...CTGGTCCGTTCCCAAAGGGCAACAGGCATTGGAAGGTTGATGGTGAACGTGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381285.8
CDS-3UTR CCA 90 bp ACTGAAGTGCAACTGAACGAGGAGGAGAGGTCCTCGCTCTCTGCACCATGTGAATCCACTTCATCCAGTTaGTCTCGTAGGTGCTGCCGA +
Preference number: 4 (lower is better)
Translates to: TEVQLNEEERSSLSAPCESTSSS*SRRCCR
Trigger: TCGGCAGCACCTACGAGACCAACTGGATGAAGTGGA...TTCACATGGTGCAGAGAGCGAGGACCTCTCCTCCTCGTTCAGTTGCACTTCAGT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CCA 90 bp CACCATGTGAAAGGAGAAGGACCTCTACACGACCACCAGCACAGCCTCCCGACAGTCGTTCAGCCTCCATaGACTTTTGCTTCTGGAGTT +
Preference number: 4 (lower is better)
Translates to: HHVKGEGPLHDHQHSLPTVVQPP*TFASGV
Trigger: AACTCCAGAAGCAAAAGTCCATGGAGGCTGAACGAC...TGTCGGGAGGCTGTGCTGGTGGTCGTGTAGAGGTCCTTCTCCTTTCACATGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CCA 90 bp GTTTCTAAACTCACACCAAGGACTGGGCATTGTAGGCCAAGAAGTCTACTTGGGGTGGACCAGGGTGCCTaGACAGCTGGCTTAGCTGGT +
Preference number: 4 (lower is better)
Translates to: VSKLTPRTGHCRPRSLLGVDQGA*TAGLAG
Trigger: ACCAGCTAAGCCAGCTGTCCAGGCACCCTGGTCCAC...CCCAAGTAGACTTCTTGGCCTACAATGCCCAGTCCTTGGTGTGAGTTTAGAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000381318.8
CDS-3UTR CCA 90 bp AAGGGGCTAGACTCCCAGCTGCACCCTGTTGAGGGCTATGGGATTTCAGCGACCCCAGTTATCCGTTTCTaGTTTCTCATTCGTGCTGGT +
Preference number: 4 (lower is better)
Translates to: KGLDSQLHPVEGYGISATPVIRF*FLIRAG
Trigger: ACCAGCACGAATGAGAAACCAGAAACGGATAACTGG...GGTCGCTGAAATCCCATAGCCCTCAACAGGGTGCAGCTGGGAGTCTAGCCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CCA 90 bp GGGCACTTCTGGTGGCCAAGTACAGAAAGTCTGTGCCCCAGAAGCAGCCTGGACCCAGTTATCCGTTTCTaGTTTCTCATTCGTGCTGGT +
Preference number: 4 (lower is better)
Translates to: GHFWWPSTESLCPRSSLDPVIRF*FLIRAG
Trigger: ACCAGCACGAATGAGAAACCAGAAACGGATAACTGG...GTCCAGGCTGCTTCTGGGGCACAGACTTTCTGTACTTGGCCACCAGAAGTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CCA 90 bp TATGGGATTTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAGACGGTGAGAGAGGGCTaGGCTGCCCATGCATCCCAG +
Preference number: 4 (lower is better)
Translates to: YGISATLEAIMRPVVRTKTVREG*AAHASQ
Trigger: CTGGGATGCATGGGCAGCCCAGCCCTCTCTCACCGT...CTTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAAATCCCATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CCA 90 bp CACCATGTGAAAGGAGAAGGACCTCTACACGACCACCAGCACAGCCTCCCGACAGTTTCACGTAAGACTTaGGGAACCAACCCTTCTGAC +
Preference number: 4 (lower is better)
Translates to: HHVKGEGPLHDHQHSLPTVSRKT*GTNPSD
Trigger: GTCAGAAGGGTTGGTTCCCCAAGTCTTACGTGAAAC...TGTCGGGAGGCTGTGCTGGTGGTCGTGTAGAGGTCCTTCTCCTTTCACATGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CCA 90 bp AAGGGGCTAGACTCCCAGCTGCACCCTGTTGAGGGCTATGGGATTTCAGCGACCGTGACAATGAGCTCGTaGATGTATCCTTGTCGCTTT +
Preference number: 4 (lower is better)
Translates to: KGLDSQLHPVEGYGISATVTMSS*MYPCRF
Trigger: AAAGCGACAAGGATACATCCACGAGCTCATTGTCAC...GGTCGCTGAAATCCCATAGCCCTCAACAGGGTGCAGCTGGGAGTCTAGCCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CCA 90 bp ACGCTATTAATGAAATGCCCCTGGAGAACACTTGCAGAACTTCCCGTAGTCCGGTCATCCGTCTTCTGCTaGATCAGGGCAGCCCCGTTG +
Preference number: 4 (lower is better)
Translates to: TLLMKCPWRTLAELPVVRSSVFC*IRAAPL
Trigger: CAACGGGGCTGCCCTGATCCAGCAGAAGACGGATGA...CCGGACTACGGGAAGTTCTGCAAGTGTTCTCCAGGGGCATTTCATTAATAGCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CCA 90 bp TCGATGCCTTCAACCACGTTCACCATCAACCTTCCAATGCCTGTTGCCCTTTGGTGCTTCAAGTGGCTGTaGTCCGGGTGGTTTTCAGGG +
Preference number: 4 (lower is better)
Translates to: SMPSTTFTINLPMPVALWCFKWL*SGWFSG
Trigger: CCCTGAAAACCACCCGGACCACAGCCACTTGAAGCA...CCAAAGGGCAACAGGCATTGGAAGGTTGATGGTGAACGTGGTTGAAGGCATCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000420666.1
CDS-3UTR CCA 90 bp GGAACGGACCAGGTACGCTTTCTCGCGCTTCTTTTTCTCAGTCTCTATGTAGAGACCCCTTCGTTCACCTaGGAACAGAGCTCTTCCGCC +
Preference number: 4 (lower is better)
Translates to: GTDQVRFLALLFLSLYVETPSFT*EQSSSA
Trigger: GGCGGAAGAGCTCTGTTCCCAGGTGAACGAAGGGGT...CTCTACATAGAGACTGAGAAAAAGAAGCGCGAGAAAGCGTACCTGGTCCGTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000420666.1
CDS-3UTR CCA 90 bp GTTGACCAGCCAATTACTTCCTCCGTGTCAGGTCTAACCAGAAGAGGTCTGCATACCCCTTCGTTCACCTaGGAACAGAGCTCTTCCGCC +
Preference number: 4 (lower is better)
Translates to: VDQPITSSVSGLTRRGLHTPSFT*EQSSSA
Trigger: GGCGGAAGAGCTCTGTTCCCAGGTGAACGAAGGGGT...ATGCAGACCTCTTCTGGTTAGACCTGACACGGAGGAAGTAATTGGCTGGTCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CCA 90 bp TGTTGCCCTTTGGGAACGGACCAGGTACGCTTTCTCGCGCTTCTTTTTCTCAGTGGACCTTTGGAGCCCTaGTCTTTCTTGATGTCCGCC +
Preference number: 4 (lower is better)
Translates to: CCPLGTDQVRFLALLFLSGPLEP*SFLMSA
Trigger: GGCGGACATCAAGAAAGACCAGGGCTCCAAAGGTCC...ACTGAGAAAAAGAAGCGCGAGAAAGCGTACCTGGTCCGTTCCCAAAGGGCAACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381285.8
CDS-3UTR CCA 90 bp ATTGTTTCGGGGCAGGGAGGATTGTCGAGAATGATTCCTAGGAGCTTTGAGGGGGGACCTTTGGAGCCCTaGTCTTTCTTGATGTCCGCC +
Preference number: 4 (lower is better)
Translates to: IVSGQGGLSRMIPRSFEGGPLEP*SFLMSA
Trigger: GGCGGACATCAAGAAAGACCAGGGCTCCAAAGGTCC...CCCCTCAAAGCTCCTAGGAATCATTCTCGACAATCCTCCCTGCCCCGAAACAAT
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CCA 90 bp TTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAGGAAAACACTCCAGACAGCATGTGTaGCCGTGGGCTGGGACCCTG +
Preference number: 4 (lower is better)
Translates to: FSDPRSHNETCSEDKGKHSRQHV*PWAGTL
Trigger: CAGGGTCCCAGCCCACGGCCACACATGCTGTCTGGA...GTGTTTTCCTTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CCA 90 bp GGTGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGGCCGTGGGCCTGCTTCTCCTGGAATaGGCTGACCTGTGGGTCCCC +
Preference number: 4 (lower is better)
Translates to: GGFLEKEYNFQTACVAVGLLLLE*ADLWVP
Trigger: GGGGACCCACAGGTCAGCCCATTCCAGGAGAAGCAG...GCCCACGGCCACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CCA 90 bp GAAGGAACGGCTATAACGGTGCACATGCTGGAAACTTCCATAGACCAGCTCTTCGAGAAAAGCTCCCAGTaGATGCCCAAGGCCCAGAGG +
Preference number: 4 (lower is better)
Translates to: EGTAITVHMLETSIDQLFEKSSQ*MPKAQR
Trigger: CCTCTGGGCCTTGGGCATCCACTGGGAGCTTTTCTC...GAAGAGCTGGTCTATGGAAGTTTCCAGCATGTGCACCGTTATAGCCGTTCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CCA 90 bp GCTTTGAGGGGCCTGTCTTTGCCATCCCATATCCCTGTGACTGAATACCAAATGTGGCCCGCTTGTCACTaGAAGCACAAGGAGCTCACG +
Preference number: 4 (lower is better)
Translates to: ALRGLSLPSHIPVTEYQMWPACH*KHKELT
Trigger: CGTGAGCTCCTTGTGCTTCCAGTGACAAGCGGGCCA...CATTTGGTATTCAGTCACAGGGATATGGGATGGCAAAGACAGGCCCCTCAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CCA 90 bp GTTCACCATCAACCTTCCAATGCCTGTTGCCCTTTGGGAACGGACCAGGTACGCCCGGGTTCTCCAGTTTaGCTTTCATCCACCATGACT +
Preference number: 4 (lower is better)
Translates to: VHHQPSNACCPLGTDQVRPGSPV*LSSTMT
Trigger: AGTCATGGTGGATGAAAGCCAAACTGGAGAACCCGG...GCGTACCTGGTCCGTTCCCAAAGGGCAACAGGCATTGGAAGGTTGATGGTGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381285.8
CDS-3UTR CCA 90 bp ATCAGTCACTGGTTTCACTGGAGCGGGAACCTCATTTTCTGGGATTTTCTCTGCGCAAAAGCCTCGAGGTaGAACACTGCAGGGGGTCCG +
Preference number: 4 (lower is better)
Translates to: ISHWFHWSGNLIFWDFLCAKASR*NTAGGP
Trigger: CGGACCCCCTGCAGTGTTCCACCTCGAGGCTTTTGC...GCAGAGAAAATCCCAGAAAATGAGGTTCCCGCTCCAGTGAAACCAGTGACTGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000419241.1
3UTR CAA 72 bp CACCGAGGATCCATTGCCAATCTTTTGACGAACTCCTaGAAGTCTGGGGCCTCATCCGTCTTCTGCTGGATC +
Preference number: 4 (lower is better)
Translates to: HRGSIANLLTNS*KSGASSVFCWI
Trigger: GATCCAGCAGAAGACGGATGAGGCCCCAGACTTCAAGGAGTTCGTCAAAAGATTGGCAATGGATCCTCGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381285.8
CDS-3UTR TCA 90 bp CTGCACCATGTGAAAGGAGAAGGACCTCTACACGACCACCAGCACAGCCTCCCGAAAGGTGTTGGAAACTaGGCCATGGTTCTGTTACTT +
Preference number: 4 (lower is better)
Translates to: LHHVKGEGPLHDHQHSLPKGVGN*AMVLLL
Trigger: AAGTAACAGAACCATGGCTCAGTTTCCAACACCTTT...CGGGAGGCTGTGCTGGTGGTCGTGTAGAGGTCCTTCTCCTTTCACATGGTGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR TCA 90 bp CGTAACTGGACCTTTGGAGCCCTGGTCTTTCTTGATGTCCGCCACACGGATCTCAGTGCAGAGGGTAGCTaGTATCCTTGTAGCTTCAGT +
Preference number: 4 (lower is better)
Translates to: RNWTFGALVFLDVRHTDLSAEGS*YPCSFS
Trigger: ACTGAAGCTACAAGGATATCAGCTACCCTCTGCACT...GAGATCCGTGTGGCGGACATCAAGAAAGACCAGGGCTCCAAAGGTCCAGTTACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381285.8
CDS-3UTR TCA 90 bp GACCGACAGGGTTTCAACTCGATGCCTTCAACCACGTTCACCATCAACCTTCCATTCAGTCTTGATGACTaGGGAACAGCCCACTCTGCC +
Preference number: 4 (lower is better)
Translates to: DRQGFNSMPSTTFTINLPFSLDD*GTAHSA
Trigger: GGCAGAGTGGGCTGTTCCTCAGTCATCAAGACTGAA...TGGAAGGTTGATGGTGAACGTGGTTGAAGGCATCGAGTTGAAACCCTGTCGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381285.8
CDS-3UTR TCA 90 bp CACCATGTGAAAGGAGAAGGACCTCTACACGACCACCAGCACAGCCTCCCGACAGTTGCTGTAGATGGGTaGTTTCGGCAATTCTCAACT +
Preference number: 4 (lower is better)
Translates to: HHVKGEGPLHDHQHSLPTVAVDG*FRQFST
Trigger: AGTTGAGAATTGCCGAAATCACCCATCTACAGCAAC...TGTCGGGAGGCTGTGCTGGTGGTCGTGTAGAGGTCCTTCTCCTTTCACATGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR TCA 90 bp CTGCACCATGTGAAAGGAGAAGGACCTCTACACGACCACCAGCACAGCCTCCCGCTTCCAAGCATTTGCTaGGATTCCTGTAATTGTTGC +
Preference number: 4 (lower is better)
Translates to: LHHVKGEGPLHDHQHSLPLPSIC*DSCNCC
Trigger: GCAACAATTACAGGAATCTCAGCAAATGCTTGGAAG...CGGGAGGCTGTGCTGGTGGTCGTGTAGAGGTCCTTCTCCTTTCACATGGTGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR TCA 90 bp CCCTTTGGGAACGGACCAGGTACGCTTTCTCGCGCTTCTTTTTCTCAGTCTCTATGCTTGTCCCTTTCCTaGGCTCGTCTTTGGGCTTCT +
Preference number: 4 (lower is better)
Translates to: PFGNGPGTLSRASFSQSLCLSLS*ARLWAS
Trigger: AGAAGCCCAAAGACGAGCTCAGGAAAGGGACAAGCA...TAGAGACTGAGAAAAAGAAGCGCGAGAAAGCGTACCTGGTCCGTTCCCAAAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381285.8
CDS-3UTR TCA 90 bp CCTTTGGGAACGGACCAGGTACGCTTTCTCGCGCTTCTTTTTCTCAGTCTCTATGCTGGTTCTTGGTGTTaGTGGAAAAGCCGACCCAGC +
Preference number: 4 (lower is better)
Translates to: PLGTDQVRFLALLFLSLYAGSWC*WKSRPS
Trigger: GCTGGGTCGGCTTTTCCATCAACACCAAGAACCAGC...ATAGAGACTGAGAAAAAGAAGCGCGAGAAAGCGTACCTGGTCCGTTCCCAAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381285.8
CDS-3UTR TCA 90 bp TGTTGCCCTTTGGGAACGGACCAGGTACGCTTTCTCGCGCTTCTTTTTCTCAGTAAAGGCTTCGTGATCTaGGTCAGCAGGAGGAAGTCG +
Preference number: 4 (lower is better)
Translates to: CCPLGTDQVRFLALLFLSKGFVI*VSRRKS
Trigger: CGACTTCCTCCTGCTGACTCAGATCACGAAGCCTTT...ACTGAGAAAAAGAAGCGCGAGAAAGCGTACCTGGTCCGTTCCCAAAGGGCAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381285.8
CDS-3UTR TCA 90 bp AGCACAGAACAGGTCACCAGCAACGACTGCTGCTATGAAATATCACAGGCCTCCAAAGGCTTCGTGATCTaGGTCAGCAGGAGGAAGTCG +
Preference number: 4 (lower is better)
Translates to: STEQVTSNDCCYEISQASKGFVI*VSRRKS
Trigger: CGACTTCCTCCTGCTGACTCAGATCACGAAGCCTTT...GGAGGCCTGTGATATTTCATAGCAGCAGTCGTTGCTGGTGACCTGTTCTGTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000381318.8
CDS-3UTR TCA 90 bp CCTTTGGGAACGGACCAGGTACGCTTTCTCGCGCTTCTTTTTCTCAGTCTCTATACCCCAAAGGCTTCGTaGTCTGAGTCAGCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: PLGTDQVRFLALLFLSLYTPKAS*SESAGG
Trigger: TCCTCCTGCTGACTCAGATCACGAAGCCTTTGGGGT...ATAGAGACTGAGAAAAAGAAGCGCGAGAAAGCGTACCTGGTCCGTTCCCAAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381285.8
CDS-3UTR TCA 90 bp GCTTTGAGGGGCCTGTCTTTGCCATCCCATATCCCTGTGACTGAATACCAAATGACCCCAAAGGCTTCGTaGTCTGAGTCAGCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: ALRGLSLPSHIPVTEYQMTPKAS*SESAGG
Trigger: TCCTCCTGCTGACTCAGATCACGAAGCCTTTGGGGT...CATTTGGTATTCAGTCACAGGGATATGGGATGGCAAAGACAGGCCCCTCAAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR TCA 90 bp ACAGAATCCTCCTTAGGTGGCCTAAGGGGCACTTCTGGTGGCCAAGTACAGAAAGGTTTGATTTGGGGCTaGAGACTTTGTCGGTGCCAG +
Preference number: 4 (lower is better)
Translates to: TESSLGGLRGTSGGQVQKGLIWG*RLCRCQ
Trigger: CTGGCACCGACAAAGTCTTCAGCCCCAAATCAAACC...TTTCTGTACTTGGCCACCAGAAGTGCCCCTTAGGCCACCTAAGGAGGATTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR TCA 90 bp AAAAGGAATACAATTTCCAGACAGCATGTGTGGCCGTGGGCTGGGACCCTGCTGGTTCAGAAGCAGCTTTaGTTTTCTGCACCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: KRNTISRQHVWPWAGTLLVQKQL*FSAPRQ
Trigger: CTGCCTGGGTGCAGAAAATCAAAGCTGCTTCTGAAC...CAGCAGGGTCCCAGCCCACGGCCACACATGCTGTCTGGAAATTGTATTCCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR TCA 90 bp TCACAGTACGGGTTGCTCTTTCCATGTGACCGACAGGGTTTCAACTCGATGCCTGCTCCAGGTCTCGGATaGAGAACTGGCAGTTGGAAT +
Preference number: 4 (lower is better)
Translates to: SQYGLLFPCDRQGFNSMPAPGLG*RTGSWN
Trigger: ATTCCAACTGCCAGTTCTTCATCCGAGACCTGGAGC...AGGCATCGAGTTGAAACCCTGTCGGTCACATGGAAAGAGCAACCCGTACTGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381285.8
CDS-3UTR TCA 90 bp GAAGGAACGGCTATAACGGTGCACATGCTGGAAACTTCCATAGACCAGCTCTTCCCCTCTCGAACACAGTaGTGCAGAGGACTTCCTGCT +
Preference number: 4 (lower is better)
Translates to: EGTAITVHMLETSIDQLFPSRTQ*CRGLPA
Trigger: AGCAGGAAGTCCTCTGCATCACTGTGTTCGAGAGGG...GAAGAGCTGGTCTATGGAAGTTTCCAGCATGTGCACCGTTATAGCCGTTCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000381318.8
CDS-3UTR TCA 90 bp GAAGGAACGGCTATAACGGTGCACATGCTGGAAACTTCCATAGACCAGCTCTTCAGCCCTGGTCTTTCTTaGTGTCCGCCACACGGATCT +
Preference number: 4 (lower is better)
Translates to: EGTAITVHMLETSIDQLFSPGLS*CPPHGS
Trigger: AGATCCGTGTGGCGGACATCAAGAAAGACCAGGGCT...GAAGAGCTGGTCTATGGAAGTTTCCAGCATGTGCACCGTTATAGCCGTTCCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000381318.8
CDS-3UTR TCA 90 bp ACCGACAGGGTTTCAACTCGATGCCTTCAACCACGTTCACCATCAACCTTCCAAGACCGTCTCACCGAGTaGTCAGCTCTAGGCAGCATT +
Preference number: 4 (lower is better)
Translates to: TDRVSTRCLQPRSPSTFQDRLTE*SALGSI
Trigger: AATGCTGCCTAGAGCTGATCACTCGGTGAGACGGTC...TTGGAAGGTTGATGGTGAACGTGGTTGAAGGCATCGAGTTGAAACCCTGTCGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381285.8
CDS-3UTR TCA 90 bp AGCCAAAAGAGATTTTTCCAACATGGCTGCCAACCGAGACCCAGTGACCCAACAGACCGTCTCACCGAGTaGTCAGCTCTAGGCAGCATT +
Preference number: 4 (lower is better)
Translates to: SQKRFFQHGCQPRPSDPTDRLTE*SALGSI
Trigger: AATGCTGCCTAGAGCTGATCACTCGGTGAGACGGTC...TGTTGGGTCACTGGGTCTCGGTTGGCAGCCATGTTGGAAAAATCTCTTTTGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000381318.8
CDS-3UTR TCA 90 bp TCATCAAACAACTGCAGGTCCAAGCGGACCACAATCTCTCCCGTGGGGACTTCGGCTGGGAATCAGAACTaGATCCACGCAACAATACAC +
Preference number: 4 (lower is better)
Translates to: SSNNCRSKRTTISPVGTSAGNQN*IHATIH
Trigger: GTGTATTGTTGCGTGGATTCAGTTCTGATTCCCAGC...CGAAGTCCCCACGGGAGAGATTGTGGTCCGCTTGGACCTGCAGTTGTTTGATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381285.8
CDS-3UTR TCA 90 bp AAAAGGAATACAATTTCCAGACAGCATGTGTGGCCGTGGGCTGGGACCCTGCTGCTAGCAATCCTCATCTaGGCTCAGCCTTCCCAGAAA +
Preference number: 4 (lower is better)
Translates to: KRNTISRQHVWPWAGTLLLAILI*AQPSQK
Trigger: TTTCTGGGAAGGCTGAGCTCAGATGAGGATTGCTAG...CAGCAGGGTCCCAGCCCACGGCCACACATGCTGTCTGGAAATTGTATTCCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR TCA 90 bp AGCACAGAACAGGTCACCAGCAACGACTGCTGCTATGAAATATCACAGGCCTCCAAGGAGAGCAGGGACTaGGCCACGTCTTCATCAGAA +
Preference number: 4 (lower is better)
Translates to: STEQVTSNDCCYEISQASKESRD*ATSSSE
Trigger: TTCTGATGAAGACGTGGCTCAGTCCCTGCTCTCCTT...GGAGGCCTGTGATATTTCATAGCAGCAGTCGTTGCTGGTGACCTGTTCTGTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR TCA 90 bp GAAACTTCCATAGACCAGCTCTTCAAAGAGCTAAGCCAGGGCCTGATCAGACCGGTGGAGCCGGCACCTTaGAATCTGCCAGTGAAAACA +
Preference number: 4 (lower is better)
Translates to: ETSIDQLFKELSQGLIRPVEPAP*NLPVKT
Trigger: TGTTTTCACTGGCAGATTTCAAGGTGCCGGCTCCAC...CGGTCTGATCAGGCCCTGGCTTAGCTCTTTGAAGAGCTGGTCTATGGAAGTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR GCA 90 bp GATAAATCTGAGACCGAACAAAAACACAGAGTGCTTTCTCATGTGGCTACAAGGCCAGGGACAAATCAGTaGCGCTCACGCGCCGCTGGG +
Preference number: 4 (lower is better)
Translates to: DKSETEQKHRVLSHVATRPGTNQ*RSRAAG
Trigger: CCCAGCGGCGCGTGAGCGGCACTGATTTGTCCCTGG...CCTTGTAGCCACATGAGAAAGCACTCTGTGTTTTTGTTCGGTCTCAGATTTATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR GCA 90 bp CAGCCAGAGGGCATCGTTCTAAGGAAGGAGAGTCAGGGCCTGTTTGGGGTTGGTCATACCAAATGCTGGTaGGCTAGAAATAGCAACTGG +
Preference number: 4 (lower is better)
Translates to: QPEGIVLRKESQGLFGVGHTKCW*ARNSNW
Trigger: CCAGTTGCTATTTCTAGCGCACCAGCATTTGGTATG...ACCAACCCCAAACAGGCCCTGACTCTCCTTCCTTAGAACGATGCCCTCTGGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR GCA 90 bp GGGCACTTCTGGTGGCCAAGTACAGAAAGTCTGTGCCCCAGAAGCAGCCTGGACGCTACATCAATGAGGTaGATTGCCAGGATAAATTCC +
Preference number: 4 (lower is better)
Translates to: GHFWWPSTESLCPRSSLDATSMR*IARINS
Trigger: GGAATTTATCCTGGCAATGCACCTCATTGATGTAGC...GTCCAGGCTGCTTCTGGGGCACAGACTTTCTGTACTTGGCCACCAGAAGTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR GCA 90 bp CAGTTATCCGTTTCTGGTTTCTCATTCGTGCTGGTGGGCCACGTGGAGCTGAAGTGTTCCAGGAGAGCTTaGCTTCGTTTCTCCAGTTCC +
Preference number: 4 (lower is better)
Translates to: QLSVSGFSFVLVGHVELKCSRRA*LRFSSS
Trigger: GGAACTGGAGAAACGAAGGCAAGCTCTCCTGGAACA...CTTCAGCTCCACGTGGCCCACCAGCACGAATGAGAAACCAGAAACGGATAACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379960.9
CDS-3UTR GCA 90 bp AGACTGTGGATATCGTTGATCGTAACGACCTCAGTGGTGTTGTCTACTGATTTTTGGGCCAGGCGCTCCTaGTCCTTGCGCTGCTGTTCC +
Preference number: 4 (lower is better)
Translates to: RLWISLIVTTSVVLSTDFWARRS*SLRCCS
Trigger: GGAACAGCAGCGCAAGGAGCAGGAGCGCCTGGCCCA...AAAATCAGTAGACAACACCACTGAGGTCGTTACGATCAACGATATCCACAGTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR GCA 90 bp ATTGTTTCGGGGCAGGGAGGATTGTCGAGAATGATTCCTAGGAGCTTTGAGGGGGTTCCAGTTGTCTTTTaGGCTCTTGCTCCTGGCGCT +
Preference number: 4 (lower is better)
Translates to: IVSGQGGLSRMIPRSFEGVPVVF*ALAPGA
Trigger: AGCGCCAGGAGCAAGAGCGCAAAAGACAACTGGAAC...CCCCTCAAAGCTCCTAGGAATCATTCTCGACAATCCTCCCTGCCCCGAAACAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR GCA 90 bp CTATGGGATTTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAACTCTCCTCCTCTCTCTaGCGTTCTAGCTCCCGCTGC +
Preference number: 4 (lower is better)
Translates to: LWDFSDPRSHNETCSEDKLSSSL*RSSSRC
Trigger: GCAGCGGGAGCTAGAACGGCAGAGAGAGGAGGAGAG...TTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAAATCCCATAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR GCA 90 bp AACAGGGCTTCAGCTACAGCATATCTAACACACAAACGGACCATGAGCTCCATTCTCTCCTCCTCTCTCTaGCGTTCTAGCTCCCGCTGC +
Preference number: 4 (lower is better)
Translates to: NRASATAYLTHKRTMSSILSSSL*RSSSRC
Trigger: GCAGCGGGAGCTAGAACGGCAGAGAGAGGAGGAGAG...AATGGAGCTCATGGTCCGTTTGTGTGTTAGATATGCTGTAGCTGAAGCCCTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR GCA 90 bp AACAGGGCTTCAGCTACAGCATATCTAACACACAAACGGACCATGAGCTCCATTTGCTCGTCCTCCTGCTaGACATGCTCCAGCCACTGC +
Preference number: 4 (lower is better)
Translates to: NRASATAYLTHKRTMSSICSSSC*TCSSHC
Trigger: GCAGTGGCTGGAGCATGTGCAGCAGGAGGACGAGCA...AATGGAGCTCATGGTCCGTTTGTGTGTTAGATATGCTGTAGCTGAAGCCCTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR GCA 90 bp GTTTCACTGGAGCGGGAACCTCATTTTCTGGGATTTTCTCTGCATAGTTTGCAGTGCAGTGGACCAGGGTaGCTGGACAGCTGGCTTAGC +
Preference number: 4 (lower is better)
Translates to: VSLEREPHFLGFSLHSLQCSGPG*LDSWLS
Trigger: GCTAAGCCAGCTGTCCAGGCACCCTGGTCCACTGCA...CTGCAAACTATGCAGAGAAAATCCCAGAAAATGAGGTTCCCGCTCCAGTGAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379960.9
ENST00000419241.1
CDS-3UTR GCA 90 bp CTATGGGATTTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAATGCAGTGGACCAGGGTaGCTGGACAGCTGGCTTAGC +
Preference number: 4 (lower is better)
Translates to: LWDFSDPRSHNETCSEDKCSGPG*LDSWLS
Trigger: GCTAAGCCAGCTGTCCAGGCACCCTGGTCCACTGCA...TTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAAATCCCATAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR GCA 90 bp AAGGGGCTAGACTCCCAGCTGCACCCTGTTGAGGGCTATGGGATTTCAGCGACCTTCTGGGATTTTCTCTaGATAGTTTGCAGGGAACCA +
Preference number: 4 (lower is better)
Translates to: KGLDSQLHPVEGYGISATFWDFL*IVCREP
Trigger: TGGTTCCCTGCAAACTATGCAGAGAAAATCCCAGAA...GGTCGCTGAAATCCCATAGCCCTCAACAGGGTGCAGCTGGGAGTCTAGCCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR GCA 90 bp CTGCACCATGTGAAAGGAGAAGGACCTCTACACGACCACCAGCACAGCCTCCCGTTCTGGGATTTTCTCTaGATAGTTTGCAGGGAACCA +
Preference number: 4 (lower is better)
Translates to: LHHVKGEGPLHDHQHSLPFWDFL*IVCREP
Trigger: TGGTTCCCTGCAAACTATGCAGAGAAAATCCCAGAA...CGGGAGGCTGTGCTGGTGGTCGTGTAGAGGTCCTTCTCCTTTCACATGGTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR GCA 90 bp ATCAGTCACTGGTTTCACTGGAGCGGGAACCTCATTTTCTGGGATTTTCTCTGCGGGCTGGGCTGCCCATaGATCCCAGTTATCCGTTTC +
Preference number: 4 (lower is better)
Translates to: ISHWFHWSGNLIFWDFLCGLGCP*IPVIRF
Trigger: GAAACGGATAACTGGGATGCATGGGCAGCCCAGCCC...GCAGAGAAAATCCCAGAAAATGAGGTTCCCGCTCCAGTGAAACCAGTGACTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379960.9
ENST00000419241.1
CDS-3UTR GCA 90 bp GGTTTCAACTCGATGCCTTCAACCACGTTCACCATCAACCTTCCAATGCCTGTTGGGCTGGGCTGCCCATaGATCCCAGTTATCCGTTTC +
Preference number: 4 (lower is better)
Translates to: GFNSMPSTTFTINLPMPVGLGCP*IPVIRF
Trigger: GAAACGGATAACTGGGATGCATGGGCAGCCCAGCCC...AACAGGCATTGGAAGGTTGATGGTGAACGTGGTTGAAGGCATCGAGTTGAAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381285.8
CDS-3UTR GCA 90 bp GGTGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGGCCGTGGGCAACGACCGGCTTGGCTaGTGGAGAGGCTACTCGCTT +
Preference number: 4 (lower is better)
Translates to: GGFLEKEYNFQTACVAVGNDRLG*WRGYSL
Trigger: AAGCGAGTAGCCTCTCCAGCAGCCAAGCCGGTCGTT...GCCCACGGCCACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR GCA 90 bp GCTTTGAGGGGCCTGTCTTTGCCATCCCATATCCCTGTGACTGAATACCAAATGCCTTCCAATGCCTGTTaGCCTTTGGGAACGGACCAG +
Preference number: 4 (lower is better)
Translates to: ALRGLSLPSHIPVTEYQMPSNAC*PLGTDQ
Trigger: CTGGTCCGTTCCCAAAGGGCAACAGGCATTGGAAGG...CATTTGGTATTCAGTCACAGGGATATGGGATGGCAAAGACAGGCCCCTCAAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR GCA 90 bp GGAACGGACCAGGTACGCTTTCTCGCGCTTCTTTTTCTCAGTCTCTATGTAGAGCCTTCCAATGCCTGTTaGCCTTTGGGAACGGACCAG +
Preference number: 4 (lower is better)
Translates to: GTDQVRFLALLFLSLYVEPSNAC*PLGTDQ
Trigger: CTGGTCCGTTCCCAAAGGGCAACAGGCATTGGAAGG...CTCTACATAGAGACTGAGAAAAAGAAGCGCGAGAAAGCGTACCTGGTCCGTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000420666.1
CDS-3UTR GCA 90 bp ATTGTTTCGGGGCAGGGAGGATTGTCGAGAATGATTCCTAGGAGCTTTGAGGGGCCTCACAGTACGGGTTaGTCTTTCCATGTGACCGAC +
Preference number: 4 (lower is better)
Translates to: IVSGQGGLSRMIPRSFEGPHSTG*SFHVTD
Trigger: GTCGGTCACATGGAAAGAGCAACCCGTACTGTGAGG...CCCCTCAAAGCTCCTAGGAATCATTCTCGACAATCCTCCCTGCCCCGAAACAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR GCA 90 bp TGCCTTCAACCACGTTCACCATCAACCTTCCAATGCCTGTTGCCCTTTGGGAACCCTCACAGTACGGGTTaGTCTTTCCATGTGACCGAC +
Preference number: 4 (lower is better)
Translates to: CLQPRSPSTFQCLLPFGNPHSTG*SFHVTD
Trigger: GTCGGTCACATGGAAAGAGCAACCCGTACTGTGAGG...GTTCCCAAAGGGCAACAGGCATTGGAAGGTTGATGGTGAACGTGGTTGAAGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000420666.1
CDS-3UTR GCA 90 bp TTCCATGTGACCGACAGGGTTTCAACTCGATGCCTTCAACCACGTTCACCATCACCCGTGGGGACTTCGTaGAGCAGAAGACACTTCGTA +
Preference number: 4 (lower is better)
Translates to: FHVTDRVSTRCLQPRSPSPVGTS*SRRHFV
Trigger: TACGAAGTGTCTTCTGCTGCACGAAGTCCCCACGGG...TGATGGTGAACGTGGTTGAAGGCATCGAGTTGAAACCCTGTCGGTCACATGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381285.8
CDS-3UTR GCA 90 bp TCGATGCCTTCAACCACGTTCACCATCAACCTTCCAATGCCTGTTGCCCTTTGGGGCTCATCAAACAACTaGAGGTCCAAGCGGACCACA +
Preference number: 4 (lower is better)
Translates to: SMPSTTFTINLPMPVALWGSSNN*RSKRTT
Trigger: TGTGGTCCGCTTGGACCTGCAGTTGTTTGATGAGCC...CCAAAGGGCAACAGGCATTGGAAGGTTGATGGTGAACGTGGTTGAAGGCATCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381285.8
CDS-3UTR GCA 90 bp GGGATTTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAGGAAGGGATGTGCGGGGCTTaGATCCTCCTAGGGTCTTTC +
Preference number: 4 (lower is better)
Translates to: GISATLEAIMRPVVRTKEGMCGA*ILLGSF
Trigger: GAAAGACCCTAGGAGGATGCAAGCCCCGCACATCCC...TTCCTTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAAATCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR GCA 90 bp TGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGGCCGTGGGCTGCTTTGCCCCGGGATGTaGGGGGCTTGCATCCTCCTA +
Preference number: 4 (lower is better)
Translates to: WFLRKGIQFPDSMCGRGLLCPGM*GACILL
Trigger: TAGGAGGATGCAAGCCCCGCACATCCCGGGGCAAAG...CAGCCCACGGCCACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR GCA 90 bp CTTATGGTGGCTCAGACTATACTGTCTGAGGGCTTCATCATGCTACCGGTTTCTGAGAGACAGCCGGCCTaGTTAGCCTTGGAAGGCAGA +
Preference number: 4 (lower is better)
Translates to: LMVAQTILSEGFIMLPVSERQPA*LALEGR
Trigger: TCTGCCTTCCAAGGCTAAGCAGGCCGGCTGTCTCTC...AGAAACCGGTAGCATGATGAAGCCCTCAGACAGTATAGTCTGAGCCACCATAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR GCA 90 bp CTTATGGTGGCTCAGACTATACTGTCTGAGGGCTTCATCATGCTACCGGTTTCTTTACCCAGGCTGGAGTaGAGTGGCGTGATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: LMVAQTILSEGFIMLPVSLPRLE*SGVISA
Trigger: AGCCGAGATCACGCCACTGCACTCCAGCCTGGGTAA...AGAAACCGGTAGCATGATGAAGCCCTCAGACAGTATAGTCTGAGCCACCATAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR GCA 90 bp ATTGTTTCGGGGCAGGGAGGATTGTCGAGAATGATTCCTAGGAGCTTTGAGGGGTCTTTGGTTCCTGTCTaGCTGAGGCCCCCATTCTGT +
Preference number: 4 (lower is better)
Translates to: IVSGQGGLSRMIPRSFEGSLVPV*LRPPFC
Trigger: ACAGAATGGGGGCCTCAGGCAGACAGGAACCAAAGA...CCCCTCAAAGCTCCTAGGAATCATTCTCGACAATCCTCCCTGCCCCGAAACAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR GCA 90 bp TTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAGGAAAACACCCAGCCTTCGGTCTCTaGCAGGCCCACATTCCTAGC +
Preference number: 4 (lower is better)
Translates to: FSDPRSHNETCSEDKGKHPAFGL*QAHIPS
Trigger: GCTAGGAATGTGGGCCTGGCAGAGACCGAAGGCTGG...GTGTTTTCCTTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR GCA 90 bp AGCCAAAAGAGATTTTTCCAACATGGCTGCCAACCGAGACCCAGTGACCCAACAACGCACAAACACGCATaGACACACCACGCACTGAGC +
Preference number: 4 (lower is better)
Translates to: SQKRFFQHGCQPRPSDPTTHKHA*THHALS
Trigger: GCTCAGTGCGTGGTGTGTGCATGCGTGTTTGTGCGT...TGTTGGGTCACTGGGTCTCGGTTGGCAGCCATGTTGGAAAAATCTCTTTTGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CCA 90 bp GCTTTGAGGGGCCTGTCTTTGCCATCCCATATCCCTGTGACTGAATACCAAATGGGATCCCATTGGCACTaGAGCAACAGCTGTAAGCGG +
Preference number: 4 (lower is better)
Translates to: ALRGLSLPSHIPVTEYQMGSHWH*SNSCKR
Trigger: CCGCTTACAGCTGTTGCTCCAGTGCCAATGGGATCC...CATTTGGTATTCAGTCACAGGGATATGGGATGGCAAAGACAGGCCCCTCAAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CCA 90 bp CAGTTATCCGTTTCTGGTTTCTCATTCGTGCTGGTGGGCCACGTGGAGCTGAAGTGGAATGGATCCCATTaGCACTGGAGCAACAGCTGT +
Preference number: 4 (lower is better)
Translates to: QLSVSGFSFVLVGHVELKWNGSH*HWSNSC
Trigger: ACAGCTGTTGCTCCAGTGCCAATGGGATCCATTCCA...CTTCAGCTCCACGTGGCCCACCAGCACGAATGAGAAACCAGAAACGGATAACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379960.9
CDS-3UTR CCA 90 bp ACTGAAGTGCAACTGAACGAGGAGGAGAGGTCCTCGCTCTCTGCACCATGTGAATGGAATGGATCCCATTaGCACTGGAGCAACAGCTGT +
Preference number: 4 (lower is better)
Translates to: TEVQLNEEERSSLSAPCEWNGSH*HWSNSC
Trigger: ACAGCTGTTGCTCCAGTGCCAATGGGATCCATTCCA...TTCACATGGTGCAGAGAGCGAGGACCTCTCCTCCTCGTTCAGTTGCACTTCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CCA 90 bp CACCATGTGAAAGGAGAAGGACCTCTACACGACCACCAGCACAGCCTCCCGACAAGACATTCCAACAACTaGAATGGATCCCATTGGCAC +
Preference number: 4 (lower is better)
Translates to: HHVKGEGPLHDHQHSLPTRHSNN*NGSHWH
Trigger: GTGCCAATGGGATCCATTCCAGTTGTTGGAATGTCT...TGTCGGGAGGCTGTGCTGGTGGTCGTGTAGAGGTCCTTCTCCTTTCACATGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CCA 90 bp CTATGGGATTTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAAGCCCACTCTGCCACTaGTGGGACACTGGCCACATC +
Preference number: 4 (lower is better)
Translates to: LWDFSDPRSHNETCSEDKSPLCH*WDTGHI
Trigger: GATGTGGCCAGTGTCCCACCAGTGGCAGAGTGGGCT...TTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAAATCCCATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CCA 90 bp GCCCAGTTATTAGGGGTCGTGGAGGGCTCTGAAGAGGTTACTGCCAAAGGGGCGAGAATAGTTCTTGCTTaGGGACCTGTTAAGTGTCCA +
Preference number: 4 (lower is better)
Translates to: AQLLGVVEGSEEVTAKGARIVLA*GPVKCP
Trigger: TGGACACTTAACAGGTCCCCAAGCAAGAACTATTCT...CGCCCCTTTGGCAGTAACCTCTTCAGAGCCCTCCACGACCCCTAATAACTGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379960.9
CDS-3UTR CCA 90 bp ACTGAAGTGCAACTGAACGAGGAGGAGAGGTCCTCGCTCTCTGCACCATGTGAAACAGGTGGCAGTGGTTaGCCAGACATAGCTACATCA +
Preference number: 4 (lower is better)
Translates to: TEVQLNEEERSSLSAPCETGGSG*PDIATS
Trigger: TGATGTAGCTATGTCTGGCCAACCACTGCCACCTGT...TTCACATGGTGCAGAGAGCGAGGACCTCTCCTCCTCGTTCAGTTGCACTTCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CCA 90 bp ACGCTATTAATGAAATGCCCCTGGAGAACACTTGCAGAACTTCCCGTAGTCCGGCAGGACAGGTGGCAGTaGTTGGCCAGACATAGCTAC +
Preference number: 4 (lower is better)
Translates to: TLLMKCPWRTLAELPVVRQDRWQ*LARHSY
Trigger: GTAGCTATGTCTGGCCAACCACTGCCACCTGTCCTG...CCGGACTACGGGAAGTTCTGCAAGTGTTCTCCAGGGGCATTTCATTAATAGCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CCA 90 bp GAAACTTCCATAGACCAGCTCTTCAAAGAGCTAAGCCAGGGCCTGATCAGACCGTCCACTTCATCCAGTTaGTCTCGTAGGTGCTGCCGA +
Preference number: 4 (lower is better)
Translates to: ETSIDQLFKELSQGLIRPSTSSS*SRRCCR
Trigger: TCGGCAGCACCTACGAGACCAACTGGATGAAGTGGA...CGGTCTGATCAGGCCCTGGCTTAGCTCTTTGAAGAGCTGGTCTATGGAAGTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000381318.8
CDS-3UTR CCA 90 bp CTGCACCATGTGAAAGGAGAAGGACCTCTACACGACCACCAGCACAGCCTCCCGCATGACTATGTCTCCTaGCTGGATAGTGATTTCATC +
Preference number: 4 (lower is better)
Translates to: LHHVKGEGPLHDHQHSLPHDYVS*LDSDFI
Trigger: GATGAAATCACTATCCAGCCAGGAGACATAGTCATG...CGGGAGGCTGTGCTGGTGGTCGTGTAGAGGTCCTTCTCCTTTCACATGGTGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CCA 90 bp CTATGGGATTTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAACACGCAAGGCCAGTTTaGGGGCAGGGGCAGATGTTG +
Preference number: 4 (lower is better)
Translates to: LWDFSDPRSHNETCSEDKHARPV*GQGQML
Trigger: CAACATCTGCCCCTGCCCCCAAACTGGCCTTGCGTG...TTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAAATCCCATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CCA 90 bp ACAGAATCCTCCTTAGGTGGCCTAAGGGGCACTTCTGGTGGCCAAGTACAGAAAGAACTCCTTGAAGTCTaGGGCCTCATCCGTCTTCTG +
Preference number: 4 (lower is better)
Translates to: TESSLGGLRGTSGGQVQKELLEV*GLIRLL
Trigger: CAGAAGACGGATGAGGCCCCAGACTTCAAGGAGTTC...TTTCTGTACTTGGCCACCAGAAGTGCCCCTTAGGCCACCTAAGGAGGATTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CCA 90 bp GGTTTCAACTCGATGCCTTCAACCACGTTCACCATCAACCTTCCAATGCCTGTTAGGGCGTGCTTCAAGTaGCTGTGGTCCGGGTGGTTT +
Preference number: 4 (lower is better)
Translates to: GFNSMPSTTFTINLPMPVRACFK*LWSGWF
Trigger: AAACCACCCGGACCACAGCCACTTGAAGCACGCCCT...AACAGGCATTGGAAGGTTGATGGTGAACGTGGTTGAAGGCATCGAGTTGAAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000420666.1
CDS-3UTR CCA 90 bp GGGATTTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAGGAAACCCCTTCGTTCACCTaGGAACAGAGCTCTTCCGCC +
Preference number: 4 (lower is better)
Translates to: GISATLEAIMRPVVRTKETPSFT*EQSSSA
Trigger: GGCGGAAGAGCTCTGTTCCCAGGTGAACGAAGGGGT...TTCCTTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAAATCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CCA 90 bp GGAACGGACCAGGTACGCTTTCTCGCGCTTCTTTTTCTCAGTCTCTATGTAGAGGGGAGATGTGGAAGATaGGCTCGTCTCCAGAAGGGT +
Preference number: 4 (lower is better)
Translates to: GTDQVRFLALLFLSLYVEGRCGR*ARLQKG
Trigger: ACCCTTCTGGAGACGAGCCCATCTTCCACATCTCCC...CTCTACATAGAGACTGAGAAAAAGAAGCGCGAGAAAGCGTACCTGGTCCGTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381285.8
CDS-3UTR CCA 90 bp GCTTTGAGGGGCCTGTCTTTGCCATCCCATATCCCTGTGACTGAATACCAAATGGGGAGATGTGGAAGATaGGCTCGTCTCCAGAAGGGT +
Preference number: 4 (lower is better)
Translates to: ALRGLSLPSHIPVTEYQMGRCGR*ARLQKG
Trigger: ACCCTTCTGGAGACGAGCCCATCTTCCACATCTCCC...CATTTGGTATTCAGTCACAGGGATATGGGATGGCAAAGACAGGCCCCTCAAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CCA 90 bp CAGGATTCAGCACATTCAAGCACAGAACAGGTCACCAGCAACGACTGCTGCTATATGCCTGTTGCCCTTTaGGAACGGACCAGGTACGCT +
Preference number: 4 (lower is better)
Translates to: QDSAHSSTEQVTSNDCCYMPVAL*ERTRYA
Trigger: AGCGTACCTGGTCCGTTCCCAAAGGGCAACAGGCAT...ATAGCAGCAGTCGTTGCTGGTGACCTGTTCTGTGCTTGAATGTGCTGAATCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000381318.8
CDS-3UTR CCA 90 bp GCTTTGAGGGGCCTGTCTTTGCCATCCCATATCCCTGTGACTGAATACCAAATGATGCCTGTTGCCCTTTaGGAACGGACCAGGTACGCT +
Preference number: 4 (lower is better)
Translates to: ALRGLSLPSHIPVTEYQMMPVAL*ERTRYA
Trigger: AGCGTACCTGGTCCGTTCCCAAAGGGCAACAGGCAT...CATTTGGTATTCAGTCACAGGGATATGGGATGGCAAAGACAGGCCCCTCAAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CCA 90 bp TTCCATGTGACCGACAGGGTTTCAACTCGATGCCTTCAACCACGTTCACCATCAATGCCTGTTGCCCTTTaGGAACGGACCAGGTACGCT +
Preference number: 4 (lower is better)
Translates to: FHVTDRVSTRCLQPRSPSMPVAL*ERTRYA
Trigger: AGCGTACCTGGTCCGTTCCCAAAGGGCAACAGGCAT...TGATGGTGAACGTGGTTGAAGGCATCGAGTTGAAACCCTGTCGGTCACATGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000420666.1
CDS-3UTR CCA 90 bp CTTCAACCACGTTCACCATCAACCTTCCAATGCCTGTTGCCCTTTGGGAACGGAGGGTTCAGAGTGTCCTaGATCGTCTTGGTGATGTGG +
Preference number: 4 (lower is better)
Translates to: LQPRSPSTFQCLLPFGNGGFRVS*IVLVMW
Trigger: CCACATCACCAAGACGATCCAGGACACTCTGAACCC...TCCGTTCCCAAAGGGCAACAGGCATTGGAAGGTTGATGGTGAACGTGGTTGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000420666.1
CDS-3UTR CCA 90 bp AAAAGGAATACAATTTCCAGACAGCATGTGTGGCCGTGGGCTGGGACCCTGCTGAAGACACTTCGTAACTaGACCTTTGGAGCCCTGGTC +
Preference number: 4 (lower is better)
Translates to: KRNTISRQHVWPWAGTLLKTLRN*TFGALV
Trigger: GACCAGGGCTCCAAAGGTCCAGTTACGAAGTGTCTT...CAGCAGGGTCCCAGCCCACGGCCACACATGCTGTCTGGAAATTGTATTCCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CCA 90 bp AGCCAAAAGAGATTTTTCCAACATGGCTGCCAACCGAGACCCAGTGACCCAACACCACAATCTCTCCCGTaGGGACTTCGTGCAGCAGAA +
Preference number: 4 (lower is better)
Translates to: SQKRFFQHGCQPRPSDPTPQSLP*GLRAAE
Trigger: TTCTGCTGCACGAAGTCCCCACGGGAGAGATTGTGG...TGTTGGGTCACTGGGTCTCGGTTGGCAGCCATGTTGGAAAAATCTCTTTTGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000381318.8
CDS-3UTR CCA 90 bp ACAGAATCCTCCTTAGGTGGCCTAAGGGGCACTTCTGGTGGCCAAGTACAGAAAAGGACACCTGGGCTTTaGTACCAGGTCACCGAGATA +
Preference number: 4 (lower is better)
Translates to: TESSLGGLRGTSGGQVQKRTPGL*YQVTEI
Trigger: TATCTCGGTGACCTGGTACCAAAGCCCAGGTGTCCT...TTTCTGTACTTGGCCACCAGAAGTGCCCCTTAGGCCACCTAAGGAGGATTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CCA 90 bp AAAAGGAATACAATTTCCAGACAGCATGTGTGGCCGTGGGCTGGGACCCTGCTGAGCATTTGGTCTCACTaGTCCACTCCAGGGAAAAGG +
Preference number: 4 (lower is better)
Translates to: KRNTISRQHVWPWAGTLLSIWSH*STPGKR
Trigger: CCTTTTCCCTGGAGTGGACCAGTGAGACCAAATGCT...CAGCAGGGTCCCAGCCCACGGCCACACATGCTGTCTGGAAATTGTATTCCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CCA 90 bp GGGATTTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAGGAAGATGTGGGTGTAATATaGCTCCCCCAGGGCCAGGGT +
Preference number: 4 (lower is better)
Translates to: GISATLEAIMRPVVRTKEDVGVI*LPQGQG
Trigger: ACCCTGGCCCTGGGGGAGCCATATTACACCCACATC...TTCCTTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAAATCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CCA 90 bp GGTTCAAGATACACAGGAAGAGCAATTTGTACTGATGTTGCTACTGGTTTAAAGGCTGCCAGGGGAGGCTaGACTCCTGGGGTTGCCCCC +
Preference number: 4 (lower is better)
Translates to: GSRYTGRAICTDVATGLKAARGG*TPGVAP
Trigger: GGGGGCAACCCCAGGAGTCCAGCCTCCCCTGGCAGC...CTTTAAACCAGTAGCAACATCAGTACAAATTGCTCTTCCTGTGTATCTTGAACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CCA 90 bp GACAGACTCCTTGTTGGCAAGGAGCATTTAATTTCTATGAAATATAGCCCAGGTATCAAGGGGCGGGCCTaGTCCTACCCCTGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: DRLLVGKEHLISMKYSPGIKGRA*SYPWAG
Trigger: CCCTGCCCAGGGGTAGGACCAGGCCCGCCCCTTGAT...ACCTGGGCTATATTTCATAGAAATTAAATGCTCCTTGCCAACAAGGAGTCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CCA 90 bp ACTGAAGTGCAACTGAACGAGGAGGAGAGGTCCTCGCTCTCTGCACCATGTGAACCGGGTTCTCCAGTTTaGCTTTCATCCACCATGACT +
Preference number: 4 (lower is better)
Translates to: TEVQLNEEERSSLSAPCEPGSPV*LSSTMT
Trigger: AGTCATGGTGGATGAAAGCCAAACTGGAGAACCCGG...TTCACATGGTGCAGAGAGCGAGGACCTCTCCTCCTCGTTCAGTTGCACTTCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399349.5
ENST00000399352.5
CDS-3UTR TCA 90 bp AAAAGGAATACAATTTCCAGACAGCATGTGTGGCCGTGGGCTGGGACCCTGCTGAGTGCAGAGGGTAGCTaGTATCCTTGTAGCTTCAGT +
Preference number: 4 (lower is better)
Translates to: KRNTISRQHVWPWAGTLLSAEGS*YPCSFS
Trigger: ACTGAAGCTACAAGGATATCAGCTACCCTCTGCACT...CAGCAGGGTCCCAGCCCACGGCCACACATGCTGTCTGGAAATTGTATTCCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR TCA 90 bp CAGGATTCAGCACATTCAAGCACAGAACAGGTCACCAGCAACGACTGCTGCTATAATGTGGCTGCAGGATaGGCAAATGCAGGCAGAGGT +
Preference number: 4 (lower is better)
Translates to: QDSAHSSTEQVTSNDCCYNVAAG*ANAGRG
Trigger: ACCTCTGCCTGCATTTGCTCATCCTGCAGCCACATT...ATAGCAGCAGTCGTTGCTGGTGACCTGTTCTGTGCTTGAATGTGCTGAATCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000381318.8
CDS-3UTR TCA 90 bp GCTTTGAGGGGCCTGTCTTTGCCATCCCATATCCCTGTGACTGAATACCAAATGAATGTGGCTGCAGGATaGGCAAATGCAGGCAGAGGT +
Preference number: 4 (lower is better)
Translates to: ALRGLSLPSHIPVTEYQMNVAAG*ANAGRG
Trigger: ACCTCTGCCTGCATTTGCTCATCCTGCAGCCACATT...CATTTGGTATTCAGTCACAGGGATATGGGATGGCAAAGACAGGCCCCTCAAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR TCA 90 bp GCCTTCAACCACGTTCACCATCAACCTTCCAATGCCTGTTGCCCTTTGGGAACGTCCTCTGGTAGCCTCTaGTCTACAGATGTTGAGCTT +
Preference number: 4 (lower is better)
Translates to: AFNHVHHQPSNACCPLGTSSGSL*STDVEL
Trigger: AAGCTCAACATCTGTAGATCAGAGGCTACCAGAGGA...CGTTCCCAAAGGGCAACAGGCATTGGAAGGTTGATGGTGAACGTGGTTGAAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381285.8
CDS-3UTR TCA 90 bp GTTGACCAGCCAATTACTTCCTCCGTGTCAGGTCTAACCAGAAGAGGTCTGCATTGCTTGTCCCTTTCCTaGGCTCGTCTTTGGGCTTCT +
Preference number: 4 (lower is better)
Translates to: VDQPITSSVSGLTRRGLHCLSLS*ARLWAS
Trigger: AGAAGCCCAAAGACGAGCTCAGGAAAGGGACAAGCA...ATGCAGACCTCTTCTGGTTAGACCTGACACGGAGGAAGTAATTGGCTGGTCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR TCA 90 bp GCTTTGAGGGGCCTGTCTTTGCCATCCCATATCCCTGTGACTGAATACCAAATGTGCTTGTCCCTTTCCTaGGCTCGTCTTTGGGCTTCT +
Preference number: 4 (lower is better)
Translates to: ALRGLSLPSHIPVTEYQMCLSLS*ARLWAS
Trigger: AGAAGCCCAAAGACGAGCTCAGGAAAGGGACAAGCA...CATTTGGTATTCAGTCACAGGGATATGGGATGGCAAAGACAGGCCCCTCAAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR TCA 90 bp CAGGATTCAGCACATTCAAGCACAGAACAGGTCACCAGCAACGACTGCTGCTATGGCAGGGGCAGATGTTaGATCAGTCACTGGTTTCAC +
Preference number: 4 (lower is better)
Translates to: QDSAHSSTEQVTSNDCCYGRGRC*ISHWFH
Trigger: GTGAAACCAGTGACTGATTCAACATCTGCCCCTGCC...ATAGCAGCAGTCGTTGCTGGTGACCTGTTCTGTGCTTGAATGTGCTGAATCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000381318.8
CDS-3UTR TCA 90 bp GAAGGAACGGCTATAACGGTGCACATGCTGGAAACTTCCATAGACCAGCTCTTCGGCAGGGGCAGATGTTaGATCAGTCACTGGTTTCAC +
Preference number: 4 (lower is better)
Translates to: EGTAITVHMLETSIDQLFGRGRC*ISHWFH
Trigger: GTGAAACCAGTGACTGATTCAACATCTGCCCCTGCC...GAAGAGCTGGTCTATGGAAGTTTCCAGCATGTGCACCGTTATAGCCGTTCCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000381318.8
CDS-3UTR TCA 90 bp AACAGGGCTTCAGCTACAGCATATCTAACACACAAACGGACCATGAGCTCCATTGGTCGTGGAGGGCTCTaGAGAGGTTACTGCCAAAGG +
Preference number: 4 (lower is better)
Translates to: NRASATAYLTHKRTMSSIGRGGL*RGYCQR
Trigger: CCTTTGGCAGTAACCTCTTCAGAGCCCTCCACGACC...AATGGAGCTCATGGTCCGTTTGTGTGTTAGATATGCTGTAGCTGAAGCCCTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR TCA 90 bp TACAATTTCCAGACAGCATGTGTGGCCGTGGGCTGGGACCCTGCTGAGCACACCTTTATACTGCAGGTTTaGTTTGGGGCTGAAGACTTT +
Preference number: 4 (lower is better)
Translates to: YNFQTACVAVGWDPAEHTFILQV*FGAEDF
Trigger: AAAGTCTTCAGCCCCAAATCAAACCTGCAGTATAAA...GGTGTGCTCAGCAGGGTCCCAGCCCACGGCCACACATGCTGTCTGGAAATTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR TCA 90 bp CAACTCGATGCCTTCAACCACGTTCACCATCAACCTTCCAATGCCTGTTGCCCTGTTCAGAAGCAGCTTTaGTTTTCTGCACCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: QLDAFNHVHHQPSNACCPVQKQL*FSAPRQ
Trigger: CTGCCTGGGTGCAGAAAATCAAAGCTGCTTCTGAAC...AGGGCAACAGGCATTGGAAGGTTGATGGTGAACGTGGTTGAAGGCATCGAGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000420666.1
CDS-3UTR TCA 90 bp TCACAGTACGGGTTGCTCTTTCCATGTGACCGACAGGGTTTCAACTCGATGCCTGTTGCTCTTTCCATGTaGCCGACAGGGTTTCAACTC +
Preference number: 4 (lower is better)
Translates to: SQYGLLFPCDRQGFNSMPVALSM*PTGFQL
Trigger: GAGTTGAAACCCTGTCGGTCACATGGAAAGAGCAAC...AGGCATCGAGTTGAAACCCTGTCGGTCACATGGAAAGAGCAACCCGTACTGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000420666.1
CDS-3UTR TCA 90 bp TGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGGCCGTGGGCTGCCTGGATCGTCTTGGTaGTGTGGCACTGGGAACCCA +
Preference number: 4 (lower is better)
Translates to: WFLRKGIQFPDSMCGRGLPGSSW*CGTGNP
Trigger: TGGGTTCCCAGTGCCACATCACCAAGACGATCCAGG...CAGCCCACGGCCACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR TCA 90 bp CTTCTAGAACTTGAGGCTACTTACACAGAGGGATCTTTTCTCTCCTACCATCCCCCTGGATCGTCTTGGTaGTGTGGCACTGGGAACCCA +
Preference number: 4 (lower is better)
Translates to: LLELEATYTEGSFLSYHPPGSSW*CGTGNP
Trigger: TGGGTTCCCAGTGCCACATCACCAAGACGATCCAGG...GGGATGGTAGGAGAGAAAAGATCCCTCTGTGTAAGTAGCCTCAAGTTCTAGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR TCA 90 bp CAGGATTCAGCACATTCAAGCACAGAACAGGTCACCAGCAACGACTGCTGCTATGGAGAGATGGGATTCTaGAGCAATGACAGGACCGTC +
Preference number: 4 (lower is better)
Translates to: QDSAHSSTEQVTSNDCCYGEMGF*SNDRTV
Trigger: GACGGTCCTGTCATTGCTTCAGAATCCCATCTCTCC...ATAGCAGCAGTCGTTGCTGGTGACCTGTTCTGTGCTTGAATGTGCTGAATCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000381318.8
CDS-3UTR TCA 90 bp GCTTTGAGGGGCCTGTCTTTGCCATCCCATATCCCTGTGACTGAATACCAAATGGGAGAGATGGGATTCTaGAGCAATGACAGGACCGTC +
Preference number: 4 (lower is better)
Translates to: ALRGLSLPSHIPVTEYQMGEMGF*SNDRTV
Trigger: GACGGTCCTGTCATTGCTTCAGAATCCCATCTCTCC...CATTTGGTATTCAGTCACAGGGATATGGGATGGCAAAGACAGGCCCCTCAAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000381318.8
CDS-3UTR TCA 90 bp GTTTCTAAACTCACACCAAGGACTGGGCATTGTAGGCCAAGAAGTCTACTTGGGCTCAAGCATCCCTGGTaGCCTGCACCTAGAAAGTCC +
Preference number: 4 (lower is better)
Translates to: VSKLTPRTGHCRPRSLLGLKHPW*PAPRKS
Trigger: GGACTTTCTAGGTGCAGGTCACCAGGGATGCTTGAG...CCCAAGTAGACTTCTTGGCCTACAATGCCCAGTCCTTGGTGTGAGTTTAGAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR TCA 90 bp GAAACTTCCATAGACCAGCTCTTCAAAGAGCTAAGCCAGGGCCTGATCAGACCGACCTCGAGCCCAAAATaGCCCTGTTACATCCAAAGC +
Preference number: 4 (lower is better)
Translates to: ETSIDQLFKELSQGLIRPTSSPK*PCYIQS
Trigger: GCTTTGGATGTAACAGGGTCATTTTGGGCTCGAGGT...CGGTCTGATCAGGCCCTGGCTTAGCTCTTTGAAGAGCTGGTCTATGGAAGTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR TCA 90 bp TATGGGATTTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAGCTCATGAGTGCAGCCTaGCGGACAAGGAAAGCCCAC +
Preference number: 4 (lower is better)
Translates to: YGISATLEAIMRPVVRTKLMSAA*RTRKAH
Trigger: GTGGGCTTTCCTTGTCCGTCAGGCTGCACTCATGAG...CTTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAAATCCCATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR TCA 90 bp ACAGAATCCTCCTTAGGTGGCCTAAGGGGCACTTCTGGTGGCCAAGTACAGAAACGGGGCTACAGCAGATaGGATCTGAGGTTGATTTCA +
Preference number: 4 (lower is better)
Translates to: TESSLGGLRGTSGGQVQKRGYSR*DLRLIS
Trigger: TGAAATCAACCTCAGATCTCATCTGCTGTAGCCCCG...TTTCTGTACTTGGCCACCAGAAGTGCCCCTTAGGCCACCTAAGGAGGATTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR TCA 90 bp AAGGGGCTAGACTCCCAGCTGCACCCTGTTGAGGGCTATGGGATTTCAGCGACCAGGATACTTTTCATTTaGTCACGCCACCATCCATTA +
Preference number: 4 (lower is better)
Translates to: KGLDSQLHPVEGYGISATRILFI*SRHHPL
Trigger: TAATGGATGGTGGCGTGATCAAATGAAAAGTATCCT...GGTCGCTGAAATCCCATAGCCCTCAACAGGGTGCAGCTGGGAGTCTAGCCCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR GCA 90 bp ATTGTTTCGGGGCAGGGAGGATTGTCGAGAATGATTCCTAGGAGCTTTGAGGGGTCTCCAGTTCCAGGTTaGCACGTTCAAAGTTCTCCC +
Preference number: 4 (lower is better)
Translates to: IVSGQGGLSRMIPRSFEGSPVPG*HVQSSP
Trigger: GGGAGAACTTTGAACGTGGCAACCTGGAACTGGAGA...CCCCTCAAAGCTCCTAGGAATCATTCTCGACAATCCTCCCTGCCCCGAAACAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR GCA 90 bp GATGCCTTCAACCACGTTCACCATCAACCTTCCAATGCCTGTTGCCCTTTGGGATGTTCCAGGAGAGCTTaGCTTCGTTTCTCCAGTTCC +
Preference number: 4 (lower is better)
Translates to: DAFNHVHHQPSNACCPLGCSRRA*LRFSSS
Trigger: GGAACTGGAGAAACGAAGGCAAGCTCTCCTGGAACA...TCCCAAAGGGCAACAGGCATTGGAAGGTTGATGGTGAACGTGGTTGAAGGCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381285.8
CDS-3UTR GCA 90 bp TGCCCATGCATCCCAGTTATCCGTTTCTGGTTTCTCATTCGTGCTGGTGGGCCACGCTGCTTTTCCAGTTaGTTCTCCAGTTCCAGTTGT +
Preference number: 4 (lower is better)
Translates to: CPCIPVIRFWFLIRAGGPRCFSS*FSSSSC
Trigger: ACAACTGGAACTGGAGAAGCAACTGGAAAAGCAGCG...TGGCCCACCAGCACGAATGAGAAACCAGAAACGGATAACTGGGATGCATGGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379960.9
CDS-3UTR GCA 90 bp ACTGAAGTGCAACTGAACGAGGAGGAGAGGTCCTCGCTCTCTGCACCATGTGAACGCTGCTTTTCCAGTTaGTTCTCCAGTTCCAGTTGT +
Preference number: 4 (lower is better)
Translates to: TEVQLNEEERSSLSAPCERCFSS*FSSSSC
Trigger: ACAACTGGAACTGGAGAAGCAACTGGAAAAGCAGCG...TTCACATGGTGCAGAGAGCGAGGACCTCTCCTCCTCGTTCAGTTGCACTTCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR GCA 90 bp AAAAGGAATACAATTTCCAGACAGCATGTGTGGCCGTGGGCTGGGACCCTGCTGCGCTGCTTTTCCAGTTaGTTCTCCAGTTCCAGTTGT +
Preference number: 4 (lower is better)
Translates to: KRNTISRQHVWPWAGTLLRCFSS*FSSSSC
Trigger: ACAACTGGAACTGGAGAAGCAACTGGAAAAGCAGCG...CAGCAGGGTCCCAGCCCACGGCCACACATGCTGTCTGGAAATTGTATTCCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR GCA 90 bp CCTTTGGGAACGGACCAGGTACGCTTTCTCGCGCTTCTTTTTCTCAGTCTCTATCGTTCTAGCTCCCGCTaGTTTTCCAGTTGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: PLGTDQVRFLALLFLSLYRSSSR*FSSCFS
Trigger: GGAGAAGCAACTGGAAAAGCAGCGGGAGCTAGAACG...ATAGAGACTGAGAAAAAGAAGCGCGAGAAAGCGTACCTGGTCCGTTCCCAAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381285.8
CDS-3UTR GCA 90 bp ACTGAAGTGCAACTGAACGAGGAGGAGAGGTCCTCGCTCTCTGCACCATGTGAAAGTTGGTCTCGTAGGTaGTGCCGAGCTAGTTCTTTT +
Preference number: 4 (lower is better)
Translates to: TEVQLNEEERSSLSAPCESWSRR*CRASSF
Trigger: AAAAGAACTAGCTCGGCAGCACCTACGAGACCAACT...TTCACATGGTGCAGAGAGCGAGGACCTCTCCTCCTCGTTCAGTTGCACTTCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR GCA 90 bp AACAGGGCTTCAGCTACAGCATATCTAACACACAAACGGACCATGAGCTCCATTCTGGTTTCTCATTCGTaGTGGTGGGCCACGTGGAGC +
Preference number: 4 (lower is better)
Translates to: NRASATAYLTHKRTMSSILVSHS*WWATWS
Trigger: GCTCCACGTGGCCCACCAGCACGAATGAGAAACCAG...AATGGAGCTCATGGTCCGTTTGTGTGTTAGATATGCTGTAGCTGAAGCCCTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR GCA 90 bp AACAGGGCTTCAGCTACAGCATATCTAACACACAAACGGACCATGAGCTCCATTGGGCTGGGCTGCCCATaGATCCCAGTTATCCGTTTC +
Preference number: 4 (lower is better)
Translates to: NRASATAYLTHKRTMSSIGLGCP*IPVIRF
Trigger: GAAACGGATAACTGGGATGCATGGGCAGCCCAGCCC...AATGGAGCTCATGGTCCGTTTGTGTGTTAGATATGCTGTAGCTGAAGCCCTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR GCA 90 bp AACAGGGCTTCAGCTACAGCATATCTAACACACAAACGGACCATGAGCTCCATTAACGACCGGCTTGGCTaGTGGAGAGGCTACTCGCTT +
Preference number: 4 (lower is better)
Translates to: NRASATAYLTHKRTMSSINDRLG*WRGYSL
Trigger: AAGCGAGTAGCCTCTCCAGCAGCCAAGCCGGTCGTT...AATGGAGCTCATGGTCCGTTTGTGTGTTAGATATGCTGTAGCTGAAGCCCTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR GCA 90 bp GGTGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGGCCGTGGGCGCGCTTTTTCCCACGTaGTTGCAGCTCTCCTTCCCA +
Preference number: 4 (lower is better)
Translates to: GGFLEKEYNFQTACVAVGALFPT*LQLSFP
Trigger: TGGGAAGGAGAGCTGCAAGCACGTGGGAAAAAGCGC...GCCCACGGCCACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR GCA 90 bp CCTTCAACCACGTTCACCATCAACCTTCCAATGCCTGTTGCCCTTTGGGAACGGAAGTCTGAACACCATTaGTGGCTTGGGTCCATGTCT +
Preference number: 4 (lower is better)
Translates to: PSTTFTINLPMPVALWERKSEHH*WLGSMS
Trigger: AGACATGGACCCAAGCCAGCAATGGTGTTCAGACTT...CCGTTCCCAAAGGGCAACAGGCATTGGAAGGTTGATGGTGAACGTGGTTGAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381285.8
CDS-3UTR GCA 90 bp CAGGATTCAGCACATTCAAGCACAGAACAGGTCACCAGCAACGACTGCTGCTATCCCCGGACATCTTCTTaGGGACTCTCAGCGCTTTTA +
Preference number: 4 (lower is better)
Translates to: QDSAHSSTEQVTSNDCCYPRTSS*GLSALL
Trigger: TAAAAGCGCTGAGAGTCCGCAAGAAGATGTCCGGGG...ATAGCAGCAGTCGTTGCTGGTGACCTGTTCTGTGCTTGAATGTGCTGAATCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000381318.8
CDS-3UTR GCA 90 bp TTCAACTCGATGCCTTCAACCACGTTCACCATCAACCTTCCAATGCCTGTTGCCCACTGTGCAGAAATTTaGGCGGCCCCAAGCAATTGG +
Preference number: 4 (lower is better)
Translates to: FNSMPSTTFTINLPMPVAHCAEI*AAPSNW
Trigger: CCAATTGCTTGGGGCCGCGCAAATTTCTGCACAGTG...GGCAACAGGCATTGGAAGGTTGATGGTGAACGTGGTTGAAGGCATCGAGTTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381285.8
CDS-3UTR GCA 90 bp GGTGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGGCCGTGGGCCCTTCCAATGCCTGTTaGCCTTTGGGAACGGACCAG +
Preference number: 4 (lower is better)
Translates to: GGFLEKEYNFQTACVAVGPSNAC*PLGTDQ
Trigger: CTGGTCCGTTCCCAAAGGGCAACAGGCATTGGAAGG...GCCCACGGCCACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR GCA 90 bp TTCCATGTGACCGACAGGGTTTCAACTCGATGCCTTCAACCACGTTCACCATCACCTCACAGTACGGGTTaGTCTTTCCATGTGACCGAC +
Preference number: 4 (lower is better)
Translates to: FHVTDRVSTRCLQPRSPSPHSTG*SFHVTD
Trigger: GTCGGTCACATGGAAAGAGCAACCCGTACTGTGAGG...TGATGGTGAACGTGGTTGAAGGCATCGAGTTGAAACCCTGTCGGTCACATGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000420666.1
CDS-3UTR GCA 90 bp AAGGGGCTAGACTCCCAGCTGCACCCTGTTGAGGGCTATGGGATTTCAGCGACCAGAGAAGTCTTTTTCTaGTTATACAAGGTACTGGCC +
Preference number: 4 (lower is better)
Translates to: KGLDSQLHPVEGYGISATREVFF*LYKVLA
Trigger: GGCCAGTACCTTGTATAAGCAGAAAAAGACTTCTCT...GGTCGCTGAAATCCCATAGCCCTCAACAGGGTGCAGCTGGGAGTCTAGCCCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR GCA 90 bp CAGCCAGAGGGCATCGTTCTAAGGAAGGAGAGTCAGGGCCTGTTTGGGGTTGGTCCTCAGTCTTTCTGCTaGTTTACGATATCACCTCAT +
Preference number: 4 (lower is better)
Translates to: QPEGIVLRKESQGLFGVGPQSFC*FTISPH
Trigger: ATGAGGTGATATCGTAAAGCAGCAGAAAGACTGAGG...ACCAACCCCAAACAGGCCCTGACTCTCCTTCCTTAGAACGATGCCCTCTGGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR GCA 90 bp AGCCAAAAGAGATTTTTCCAACATGGCTGCCAACCGAGACCCAGTGACCCAACACTGCTCACCCAACGCTaGAAAGCCACTACACCCTTT +
Preference number: 4 (lower is better)
Translates to: SQKRFFQHGCQPRPSDPTLLTQR*KATTPF
Trigger: AAAGGGTGTAGTGGCTTTGCAGCGTTGGGTGAGCAG...TGTTGGGTCACTGGGTCTCGGTTGGCAGCCATGTTGGAAAAATCTCTTTTGGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR GCA 90 bp ACAGAATCCTCCTTAGGTGGCCTAAGGGGCACTTCTGGTGGCCAAGTACAGAAATCTACACAAGAGCAATaGCTAGCAGCTGCGGTAGGT +
Preference number: 4 (lower is better)
Translates to: TESSLGGLRGTSGGQVQKSTQEQ*LAAAVG
Trigger: ACCTACCGCAGCTGCTAGGCATTGCTCTTGTGTAGA...TTTCTGTACTTGGCCACCAGAAGTGCCCCTTAGGCCACCTAAGGAGGATTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR GCA 90 bp TATGGGATTTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAGCAAGGCACAGAGCCATaGATCCCCCTAGGTGTGGGT +
Preference number: 4 (lower is better)
Translates to: YGISATLEAIMRPVVRTKQGTEP*IPLGVG
Trigger: ACCCACACCTAGGGGGATGCATGGCTCTGTGCCTTG...CTTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAAATCCCATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR GCA 90 bp GAAGGAACGGCTATAACGGTGCACATGCTGGAAACTTCCATAGACCAGCTCTTCGAACCCAAGGAAGCCTaGGTGGCACATGGATCTGAT +
Preference number: 4 (lower is better)
Translates to: EGTAITVHMLETSIDQLFEPKEA*VAHGSD
Trigger: ATCAGATCCATGTGCCACGCAGGCTTCCTTGGGTTC...GAAGAGCTGGTCTATGGAAGTTTCCAGCATGTGCACCGTTATAGCCGTTCCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR GCA 90 bp GAAGGAACGGCTATAACGGTGCACATGCTGGAAACTTCCATAGACCAGCTCTTCAGTACAGAAAGTCTGTaGCCCAGAAGCAGCCTGGAC +
Preference number: 4 (lower is better)
Translates to: EGTAITVHMLETSIDQLFSTESL*PRSSLD
Trigger: GTCCAGGCTGCTTCTGGGGCACAGACTTTCTGTACT...GAAGAGCTGGTCTATGGAAGTTTCCAGCATGTGCACCGTTATAGCCGTTCCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR GCA 90 bp TTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAGGAAAACACAGAGCTCATCTCCTCTaGTGGCAGGCCTTAGGTGGC +
Preference number: 4 (lower is better)
Translates to: FSDPRSHNETCSEDKGKHRAHLL*WQALGG
Trigger: GCCACCTAAGGCCTGCCAGCAGAGGAGATGAGCTCT...GTGTTTTCCTTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR GCA 90 bp AACAGGGCTTCAGCTACAGCATATCTAACACACAAACGGACCATGAGCTCCATTAGGACAGCTAGATTGTaGTTGAGGCTCCCCCTGCCC +
Preference number: 4 (lower is better)
Translates to: NRASATAYLTHKRTMSSIRTARL*LRLPLP
Trigger: GGGCAGGGGGAGCCTCAAGCACAATCTAGCTGTCCT...AATGGAGCTCATGGTCCGTTTGTGTGTTAGATATGCTGTAGCTGAAGCCCTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR GCA 90 bp GTGACCGACAGGGTTTCAACTCGATGCCTTCAACCACGTTCACCATCAACCTTCGCAGCTTTGATTTTCTaGACCCAGGCAGTCCTCAGA +
Preference number: 4 (lower is better)
Translates to: VTDRVSTRCLQPRSPSTFAALIF*TQAVLR
Trigger: TCTGAGGACTGCCTGGGTGCAGAAAATCAAAGCTGC...GAAGGTTGATGGTGAACGTGGTTGAAGGCATCGAGTTGAAACCCTGTCGGTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420666.1
CDS-3UTR CCA 90 bp AACCACGTTCACCATCAACCTTCCAATGCCTGTTGCCCTTTGGGAACGGACCAGGCCACCAAAAGGTGTTaGAAACTGAGCCATGGTTCT +
Preference number: 4 (lower is better)
Translates to: NHVHHQPSNACCPLGTDQATKRC*KLSHGS
Trigger: AGAACCATGGCTCAGTTTCCAACACCTTTTGGTGGC...CTGGTCCGTTCCCAAAGGGCAACAGGCATTGGAAGGTTGATGGTGAACGTGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381285.8
CDS-3UTR CCA 90 bp AAAAGGAATACAATTTCCAGACAGCATGTGTGGCCGTGGGCTGGGACCCTGCTGTTTCCTCTACAGTTATaGCCCAGATATCCAGGCTGC +
Preference number: 4 (lower is better)
Translates to: KRNTISRQHVWPWAGTLLFPLQL*PRYPGC
Trigger: GCAGCCTGGATATCTGGGCCATAACTGTAGAGGAAA...CAGCAGGGTCCCAGCCCACGGCCACACATGCTGTCTGGAAATTGTATTCCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CCA 90 bp GCTGCAGCAGCGGACTGTAAGTTTCTTCCTTTTCCCCTGACTGGCGGCCTGCATGCTAGAAATAGCAACTaGTTGCTGTTTCATGACAGG +
Preference number: 4 (lower is better)
Translates to: AAAADCKFLPFPLTGGLHARNSN*LLFHDR
Trigger: CCTGTCATGAAACAGCAACCAGTTGCTATTTCTAGC...ATGCAGGCCGCCAGTCAGGGGAAAAGGAAGAAACTTACAGTCCGCTGCTGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456489.1
CDS-3UTR CCA 90 bp GAAACTTCCATAGACCAGCTCTTCAAAGAGCTAAGCCAGGGCCTGATCAGACCGTGGAATGGATCCCATTaGCACTGGAGCAACAGCTGT +
Preference number: 4 (lower is better)
Translates to: ETSIDQLFKELSQGLIRPWNGSH*HWSNSC
Trigger: ACAGCTGTTGCTCCAGTGCCAATGGGATCCATTCCA...CGGTCTGATCAGGCCCTGGCTTAGCTCTTTGAAGAGCTGGTCTATGGAAGTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CCA 90 bp ACTGAAGTGCAACTGAACGAGGAGGAGAGGTCCTCGCTCTCTGCACCATGTGAATTCCAACAACTGGAATaGATCCCATTGGCACTGGAG +
Preference number: 4 (lower is better)
Translates to: TEVQLNEEERSSLSAPCEFQQLE*IPLALE
Trigger: CTCCAGTGCCAATGGGATCCATTCCAGTTGTTGGAA...TTCACATGGTGCAGAGAGCGAGGACCTCTCCTCCTCGTTCAGTTGCACTTCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CCA 90 bp GTTCACCATCAACCTTCCAATGCCTGTTGCCCTTTGGGAACGGACCAGGTACGCAACTCTTTGGCAATGTaGCTGCAGGATGAGCAAATG +
Preference number: 4 (lower is better)
Translates to: VHHQPSNACCPLGTDQVRNSLAM*LQDEQM
Trigger: CATTTGCTCATCCTGCAGCCACATTGCCAAAGAGTT...GCGTACCTGGTCCGTTCCCAAAGGGCAACAGGCATTGGAAGGTTGATGGTGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381285.8
CDS-3UTR CCA 90 bp GGAACGGACCAGGTACGCTTTCTCGCGCTTCTTTTTCTCAGTCTCTATGTAGAGCCACTGGTGGGACACTaGCCACATCAAATGACTGTG +
Preference number: 4 (lower is better)
Translates to: GTDQVRFLALLFLSLYVEPLVGH*PHQMTV
Trigger: CACAGTCATTTGATGTGGCCAGTGTCCCACCAGTGG...CTCTACATAGAGACTGAGAAAAAGAAGCGCGAGAAAGCGTACCTGGTCCGTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381285.8
CDS-3UTR CCA 90 bp CACCATGTGAAAGGAGAAGGACCTCTACACGACCACCAGCACAGCCTCCCGACAAGAATAGTTCTTGCTTaGGGACCTGTTAAGTGTCCA +
Preference number: 4 (lower is better)
Translates to: HHVKGEGPLHDHQHSLPTRIVLA*GPVKCP
Trigger: TGGACACTTAACAGGTCCCCAAGCAAGAACTATTCT...TGTCGGGAGGCTGTGCTGGTGGTCGTGTAGAGGTCCTTCTCCTTTCACATGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CCA 90 bp ATTGTTTCGGGGCAGGGAGGATTGTCGAGAATGATTCCTAGGAGCTTTGAGGGGACAGGTGGCAGTGGTTaGCCAGACATAGCTACATCA +
Preference number: 4 (lower is better)
Translates to: IVSGQGGLSRMIPRSFEGTGGSG*PDIATS
Trigger: TGATGTAGCTATGTCTGGCCAACCACTGCCACCTGT...CCCCTCAAAGCTCCTAGGAATCATTCTCGACAATCCTCCCTGCCCCGAAACAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CCA 90 bp TATGGGATTTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAGTGGAGGCAGGACAGGTaGCAGTGGTTGGCCAGACAT +
Preference number: 4 (lower is better)
Translates to: YGISATLEAIMRPVVRTKWRQDR*QWLARH
Trigger: ATGTCTGGCCAACCACTGCCACCTGTCCTGCCTCCA...CTTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAAATCCCATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CCA 90 bp CACCATGTGAAAGGAGAAGGACCTCTACACGACCACCAGCACAGCCTCCCGACATCAATTTCTTGCCTTTaGGTGGTCAATCGACATCTG +
Preference number: 4 (lower is better)
Translates to: HHVKGEGPLHDHQHSLPTSISCL*VVNRHL
Trigger: CAGATGTCGATTGACCACCCAAAGGCAAGAAATTGA...TGTCGGGAGGCTGTGCTGGTGGTCGTGTAGAGGTCCTTCTCCTTTCACATGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CCA 90 bp GCTTTGAGGGGCCTGTCTTTGCCATCCCATATCCCTGTGACTGAATACCAAATGTCCACTTCATCCAGTTaGTCTCGTAGGTGCTGCCGA +
Preference number: 4 (lower is better)
Translates to: ALRGLSLPSHIPVTEYQMSTSSS*SRRCCR
Trigger: TCGGCAGCACCTACGAGACCAACTGGATGAAGTGGA...CATTTGGTATTCAGTCACAGGGATATGGGATGGCAAAGACAGGCCCCTCAAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CCA 90 bp ACTGAAGTGCAACTGAACGAGGAGGAGAGGTCCTCGCTCTCTGCACCATGTGAAGTCGTTCAGCCTCCATaGACTTTTGCTTCTGGAGTT +
Preference number: 4 (lower is better)
Translates to: TEVQLNEEERSSLSAPCEVVQPP*TFASGV
Trigger: AACTCCAGAAGCAAAAGTCCATGGAGGCTGAACGAC...TTCACATGGTGCAGAGAGCGAGGACCTCTCCTCCTCGTTCAGTTGCACTTCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CCA 90 bp AAAAGGAATACAATTTCCAGACAGCATGTGTGGCCGTGGGCTGGGACCCTGCTGTTCGTGGAGTTTTCTTaGTCTCTGATGCTCGTCCTC +
Preference number: 4 (lower is better)
Translates to: KRNTISRQHVWPWAGTLLFVEFS*SLMLVL
Trigger: GAGGACGAGCATCAGAGACCAAGAAAACTCCACGAA...CAGCAGGGTCCCAGCCCACGGCCACACATGCTGTCTGGAAATTGTATTCCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CCA 90 bp AAGGCCAGTTTGGGGGCAGGGGCAGATGTTGAATCAGTCACTGGTTTCACTGGAGACAGCTGGCTTAGCTaGTTCTTGGTGTTGATGGAA +
Preference number: 4 (lower is better)
Translates to: KASLGAGADVESVTGFTGDSWLS*FLVLME
Trigger: TTCCATCAACACCAAGAACCAGCTAAGCCAGCTGTC...TCCAGTGAAACCAGTGACTGATTCAACATCTGCCCCTGCCCCCAAACTGGCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379960.9
CDS-3UTR CCA 90 bp TTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAGGAAAACACGGGTGCCTGGACAGCTaGCTTAGCTGGTTCTTGGTG +
Preference number: 4 (lower is better)
Translates to: FSDPRSHNETCSEDKGKHGCLDS*LSWFLV
Trigger: CACCAAGAACCAGCTAAGCCAGCTGTCCAGGCACCC...GTGTTTTCCTTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CCA 90 bp TTCCAGTTGTCTTTTGCGCTCTTGCTCCTGGCGCTCACGCTCCTTCCTCTCCTGTGCAGAAATGGTAAGTaGACCTTTTTCTGCAGTGGA +
Preference number: 4 (lower is better)
Translates to: FQLSFALLLLALTLLPLLCRNGK*TFFCSG
Trigger: TCCACTGCAGAAAAAGGTCCACTTACCATTTCTGCA...CAGGAGAGGAAGGAGCGTGAGCGCCAGGAGCAAGAGCGCAAAAGACAACTGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379960.9
CDS-3UTR CCA 90 bp AAGGGGCTAGACTCCCAGCTGCACCCTGTTGAGGGCTATGGGATTTCAGCGACCATAGTGATTTCATCATaGCTTCTGGATTCAAAGGGG +
Preference number: 4 (lower is better)
Translates to: KGLDSQLHPVEGYGISATIVISS*LLDSKG
Trigger: CCCCTTTGAATCCAGAAGCCATGATGAAATCACTAT...GGTCGCTGAAATCCCATAGCCCTCAACAGGGTGCAGCTGGGAGTCTAGCCCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CCA 90 bp AAAAGGAATACAATTTCCAGACAGCATGTGTGGCCGTGGGCTGGGACCCTGCTGAGTCACTGGTTTCACTaGAGCGGGAACCTCATTTTC +
Preference number: 4 (lower is better)
Translates to: KRNTISRQHVWPWAGTLLSHWFH*SGNLIF
Trigger: GAAAATGAGGTTCCCGCTCCAGTGAAACCAGTGACT...CAGCAGGGTCCCAGCCCACGGCCACACATGCTGTCTGGAAATTGTATTCCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CCA 90 bp TTCTGTTTCAGTCGTTCAGCCTCCATGGACTTTTGCTTCTGGAGTTGTTGCTTACACGCAAGGCCAGTTTaGGGGCAGGGGCAGATGTTG +
Preference number: 4 (lower is better)
Translates to: FCFSRSASMDFCFWSCCLHARPV*GQGQML
Trigger: CAACATCTGCCCCTGCCCCCAAACTGGCCTTGCGTG...TAAGCAACAACTCCAGAAGCAAAAGTCCATGGAGGCTGAACGACTGAAACAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000379960.9
CDS-3UTR CCA 90 bp GCTGCCCATGCATCCCAGTTATCCGTTTCTGGTTTCTCATTCGTGCTGGTGGGCCCAGTTATCCGTTTCTaGTTTCTCATTCGTGCTGGT +
Preference number: 4 (lower is better)
Translates to: AAHASQLSVSGFSFVLVGPVIRF*FLIRAG
Trigger: ACCAGCACGAATGAGAAACCAGAAACGGATAACTGG...GCCCACCAGCACGAATGAGAAACCAGAAACGGATAACTGGGATGCATGGGCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379960.9
ENST00000419241.1
CDS-3UTR CCA 90 bp GATAAATCTGAGACCGAACAAAAACACAGAGTGCTTTCTCATGTGGCTACAAGGACGGTGAGAGAGGGCTaGGCTGCCCATGCATCCCAG +
Preference number: 4 (lower is better)
Translates to: DKSETEQKHRVLSHVATRTVREG*AAHASQ
Trigger: CTGGGATGCATGGGCAGCCCAGCCCTCTCTCACCGT...CCTTGTAGCCACATGAGAAAGCACTCTGTGTTTTTGTTCGGTCTCAGATTTATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CCA 90 bp CCAAATGGTGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGGCCACGGTGAGAGAGGGCTaGGCTGCCCATGCATCCCAG +
Preference number: 4 (lower is better)
Translates to: PNGGFLEKEYNFQTACVATVREG*AAHASQ
Trigger: CTGGGATGCATGGGCAGCCCAGCCCTCTCTCACCGT...GGCCACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCACCATTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CCA 90 bp TGTCCTACAACAATCAGGATTCAGCACATTCAAGCACAGAACAGGTCACCAGCAGACCTCTGCCTTAACTaGCCGGCACTTGGAACGGTG +
Preference number: 4 (lower is better)
Translates to: CPTTIRIQHIQAQNRSPADLCLN*PALGTV
Trigger: CACCGTTCCAAGTGCCGGCCAGTTAAGGCAGAGGTC...TGCTGGTGACCTGTTCTGTGCTTGAATGTGCTGAATCCTGATTGTTGTAGGACA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000381318.8
CDS-3UTR CCA 90 bp TTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAGGAAAACACGACCTCTGCCTTAACTaGCCGGCACTTGGAACGGTG +
Preference number: 4 (lower is better)
Translates to: FSDPRSHNETCSEDKGKHDLCLN*PALGTV
Trigger: CACCGTTCCAAGTGCCGGCCAGTTAAGGCAGAGGTC...GTGTTTTCCTTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CCA 90 bp CAACCAGATAAATCTGAGACCGAACAAAAACACAGAGTGCTTTCTCATGTGGCTGCCAGTGGCCGTGGCTaGAGTAAAGGCGGACCTCTG +
Preference number: 4 (lower is better)
Translates to: QPDKSETEQKHRVLSHVAASGRG*SKGGPL
Trigger: CAGAGGTCCGCCTTTACTCCAGCCACGGCCACTGGC...AGCCACATGAGAAAGCACTCTGTGTTTTTGTTCGGTCTCAGATTTATCTGGTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CCA 90 bp TCACTGGTTTCACTGGAGCGGGAACCTCATTTTCTGGGATTTTCTCTGCATAGTTCCACCTTTTCACCCTaGCCTAGCACAGGAGACGGG +
Preference number: 4 (lower is better)
Translates to: SLVSLEREPHFLGFSLHSSTFSP*PSTGDG
Trigger: CCCGTCTCCTGTGCTAGGCCAGGGTGAAAAGGTGGA...ACTATGCAGAGAAAATCCCAGAAAATGAGGTTCCCGCTCCAGTGAAACCAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000379960.9
CDS-3UTR CCA 90 bp AACAGGGCTTCAGCTACAGCATATCTAACACACAAACGGACCATGAGCTCCATTTCCACCTTTTCACCCTaGCCTAGCACAGGAGACGGG +
Preference number: 4 (lower is better)
Translates to: NRASATAYLTHKRTMSSISTFSP*PSTGDG
Trigger: CCCGTCTCCTGTGCTAGGCCAGGGTGAAAAGGTGGA...AATGGAGCTCATGGTCCGTTTGTGTGTTAGATATGCTGTAGCTGAAGCCCTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CCA 90 bp TATGGGATTTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAGTCCACCTTTTCACCCTaGCCTAGCACAGGAGACGGG +
Preference number: 4 (lower is better)
Translates to: YGISATLEAIMRPVVRTKSTFSP*PSTGDG
Trigger: CCCGTCTCCTGTGCTAGGCCAGGGTGAAAAGGTGGA...CTTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAAATCCCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CCA 90 bp GCTTTGAGGGGCCTGTCTTTGCCATCCCATATCCCTGTGACTGAATACCAAATGGAACTCCTTGAAGTCTaGGGCCTCATCCGTCTTCTG +
Preference number: 4 (lower is better)
Translates to: ALRGLSLPSHIPVTEYQMELLEV*GLIRLL
Trigger: CAGAAGACGGATGAGGCCCCAGACTTCAAGGAGTTC...CATTTGGTATTCAGTCACAGGGATATGGGATGGCAAAGACAGGCCCCTCAAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CCA 90 bp GTTTCTAAACTCACACCAAGGACTGGGCATTGTAGGCCAAGAAGTCTACTTGGGTGCTTCAAGTGGCTGTaGTCCGGGTGGTTTTCAGGG +
Preference number: 4 (lower is better)
Translates to: VSKLTPRTGHCRPRSLLGCFKWL*SGWFSG
Trigger: CCCTGAAAACCACCCGGACCACAGCCACTTGAAGCA...CCCAAGTAGACTTCTTGGCCTACAATGCCCAGTCCTTGGTGTGAGTTTAGAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000381318.8
CDS-3UTR CCA 90 bp GGTGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGGCCGTGGGCTGCTTCAAGTGGCTGTaGTCCGGGTGGTTTTCAGGG +
Preference number: 4 (lower is better)
Translates to: GGFLEKEYNFQTACVAVGCFKWL*SGWFSG
Trigger: CCCTGAAAACCACCCGGACCACAGCCACTTGAAGCA...GCCCACGGCCACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CCA 90 bp ACCGACAGGGTTTCAACTCGATGCCTTCAACCACGTTCACCATCAACCTTCCAAATCGTCTTGGTGATGTaGCACTGGGAACCCATGGTC +
Preference number: 4 (lower is better)
Translates to: TDRVSTRCLQPRSPSTFQIVLVM*HWEPMV
Trigger: GACCATGGGTTCCCAGTGCCACATCACCAAGACGAT...TTGGAAGGTTGATGGTGAACGTGGTTGAAGGCATCGAGTTGAAACCCTGTCGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000420666.1
CDS-3UTR CCA 90 bp GAAGGAACGGCTATAACGGTGCACATGCTGGAAACTTCCATAGACCAGCTCTTCGGGTTCAGAGTGTCCTaGATCGTCTTGGTGATGTGG +
Preference number: 4 (lower is better)
Translates to: EGTAITVHMLETSIDQLFGFRVS*IVLVMW
Trigger: CCACATCACCAAGACGATCCAGGACACTCTGAACCC...GAAGAGCTGGTCTATGGAAGTTTCCAGCATGTGCACCGTTATAGCCGTTCCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000381318.8
CDS-3UTR CCA 90 bp TCGATGCCTTCAACCACGTTCACCATCAACCTTCCAATGCCTGTTGCCCTTTGGTCATCTGGTGAGAACTaGTCCCTCTCGAACACAGTG +
Preference number: 4 (lower is better)
Translates to: SMPSTTFTINLPMPVALWSSGEN*SLSNTV
Trigger: CACTGTGTTCGAGAGGGACCAGTTCTCACCAGATGA...CCAAAGGGCAACAGGCATTGGAAGGTTGATGGTGAACGTGGTTGAAGGCATCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381285.8
CDS-3UTR CCA 90 bp CTTATGGTGGCTCAGACTATACTGTCTGAGGGCTTCATCATGCTACCGGTTTCTGGACCTTTGGAGCCCTaGTCTTTCTTGATGTCCGCC +
Preference number: 4 (lower is better)
Translates to: LMVAQTILSEGFIMLPVSGPLEP*SFLMSA
Trigger: GGCGGACATCAAGAAAGACCAGGGCTCCAAAGGTCC...AGAAACCGGTAGCATGATGAAGCCCTCAGACAGTATAGTCTGAGCCACCATAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CCA 90 bp GGGATTTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAGGAACCACAATCTCTCCCGTaGGGACTTCGTGCAGCAGAA +
Preference number: 4 (lower is better)
Translates to: GISATLEAIMRPVVRTKEPQSLP*GLRAAE
Trigger: TTCTGCTGCACGAAGTCCCCACGGGAGAGATTGTGG...TTCCTTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAAATCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CCA 90 bp AAAAGGAATACAATTTCCAGACAGCATGTGTGGCCGTGGGCTGGGACCCTGCTGGCCAAGAAGTCTACTTaGGGACTGGTGGATGTAAGA +
Preference number: 4 (lower is better)
Translates to: KRNTISRQHVWPWAGTLLAKKST*GLVDVR
Trigger: TCTTACATCCACCAGTCCCCAAGTAGACTTCTTGGC...CAGCAGGGTCCCAGCCCACGGCCACACATGCTGTCTGGAAATTGTATTCCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000381318.8
CDS-3UTR CCA 90 bp TCGATGCCTTCAACCACGTTCACCATCAACCTTCCAATGCCTGTTGCCCTTTGGGAGATTTTTCCAACATaGCTGCCAACCGAGACCCAG +
Preference number: 4 (lower is better)
Translates to: SMPSTTFTINLPMPVALWEIFPT*LPTETQ
Trigger: CTGGGTCTCGGTTGGCAGCCATGTTGGAAAAATCTC...CCAAAGGGCAACAGGCATTGGAAGGTTGATGGTGAACGTGGTTGAAGGCATCGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381285.8
CDS-3UTR CCA 90 bp AAGGGGCTAGACTCCCAGCTGCACCCTGTTGAGGGCTATGGGATTTCAGCGACCAGACAGACTCCTTGTTaGCAAGGAGCATTTAATTTC +
Preference number: 4 (lower is better)
Translates to: KGLDSQLHPVEGYGISATRQTPC*QGAFNF
Trigger: GAAATTAAATGCTCCTTGCCAACAAGGAGTCTGTCT...GGTCGCTGAAATCCCATAGCCCTCAACAGGGTGCAGCTGGGAGTCTAGCCCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CCA 90 bp CTTATGGTGGCTCAGACTATACTGTCTGAGGGCTTCATCATGCTACCGGTTTCTCTAGAAGGCGGGCCCTaGGCTACTGCACATGAAGTA +
Preference number: 4 (lower is better)
Translates to: LMVAQTILSEGFIMLPVSLEGGP*ATAHEV
Trigger: TACTTCATGTGCAGTAGCCCAGGGCCCGCCTTCTAG...AGAAACCGGTAGCATGATGAAGCCCTCAGACAGTATAGTCTGAGCCACCATAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CCA 90 bp TATGGGATTTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAGAGCAGCTGCGGTAGGTaGAGCCGGCACCTTGAAATC +
Preference number: 4 (lower is better)
Translates to: YGISATLEAIMRPVVRTKSSCGR*SRHLEI
Trigger: GATTTCAAGGTGCCGGCTCCACCTACCGCAGCTGCT...CTTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAAATCCCATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CCA 90 bp CTATGGGATTTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAACAAGTGTCCAGCCACTaGGGAAGGGACACTGAGCAC +
Preference number: 4 (lower is better)
Translates to: LWDFSDPRSHNETCSEDKQVSSH*GRDTEH
Trigger: GTGCTCAGTGTCCCTTCCCCAGTGGCTGGACACTTG...TTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAAATCCCATAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CCA 90 bp ACGCTATTAATGAAATGCCCCTGGAGAACACTTGCAGAACTTCCCGTAGTCCGGGCCCCAGAAGCAGCCTaGACTTCTGATCCTTTTCTG +
Preference number: 4 (lower is better)
Translates to: TLLMKCPWRTLAELPVVRAPEAA*TSDPFL
Trigger: CAGAAAAGGATCAGAAGTCCAGGCTGCTTCTGGGGC...CCGGACTACGGGAAGTTCTGCAAGTGTTCTCCAGGGGCATTTCATTAATAGCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CCA 90 bp GAAACTTCCATAGACCAGCTCTTCAAAGAGCTAAGCCAGGGCCTGATCAGACCGCCTAAGGGGCACTTCTaGTGGCCAAGTACAGAAAGT +
Preference number: 4 (lower is better)
Translates to: ETSIDQLFKELSQGLIRPPKGHF*WPSTES
Trigger: ACTTTCTGTACTTGGCCACCAGAAGTGCCCCTTAGG...CGGTCTGATCAGGCCCTGGCTTAGCTCTTTGAAGAGCTGGTCTATGGAAGTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CCA 90 bp CTATGGGATTTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAGCTCATCTCCTCTGCTaGCAGGCCTTAGGTGGCCTT +
Preference number: 4 (lower is better)
Translates to: LWDFSDPRSHNETCSEDKAHLLC*QALGGL
Trigger: AAGGCCACCTAAGGCCTGCCAGCAGAGGAGATGAGC...TTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAAATCCCATAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CCA 90 bp AAGGGGCTAGACTCCCAGCTGCACCCTGTTGAGGGCTATGGGATTTCAGCGACCGAAGAAACAATGTTTTaGCCCTGCTTCATCAAACCT +
Preference number: 4 (lower is better)
Translates to: KGLDSQLHPVEGYGISATEETMF*PCFIKP
Trigger: AGGTTTGATGAAGCAGGGCCAAAACATTGTTTCTTC...GGTCGCTGAAATCCCATAGCCCTCAACAGGGTGCAGCTGGGAGTCTAGCCCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CCA 90 bp CAATTTCTTTCCTCCTCTCCTCCTCTCTCTGCCGTTCTAGCTCCCGCTGCTTTTCCGGGTTCTCCAGTTTaGCTTTCATCCACCATGACT +
Preference number: 4 (lower is better)
Translates to: QFLSSSPPLSAVLAPAAFPGSPV*LSSTMT
Trigger: AGTCATGGTGGATGAAAGCCAAACTGGAGAACCCGG...AAAAGCAGCGGGAGCTAGAACGGCAGAGAGAGGAGGAGAGGAGGAAAGAAATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379960.9
CDS-3UTR TCA 90 bp ACTGAAGTGCAACTGAACGAGGAGGAGAGGTCCTCGCTCTCTGCACCATGTGAAAAACTATGGAACTGCTaGTCATGCTTCGCTCTTTCC +
Preference number: 4 (lower is better)
Translates to: TEVQLNEEERSSLSAPCEKLWNC*SCFALS
Trigger: GGAAAGAGCGAAGCATGATCAGCAGTTCCATAGTTT...TTCACATGGTGCAGAGAGCGAGGACCTCTCCTCCTCGTTCAGTTGCACTTCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR TCA 90 bp GGGATTTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAGGAAAATGTGGCTGCAGGATaGGCAAATGCAGGCAGAGGT +
Preference number: 4 (lower is better)
Translates to: GISATLEAIMRPVVRTKENVAAG*ANAGRG
Trigger: ACCTCTGCCTGCATTTGCTCATCCTGCAGCCACATT...TTCCTTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAAATCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR TCA 90 bp ATTGTTTCGGGGCAGGGAGGATTGTCGAGAATGATTCCTAGGAGCTTTGAGGGGAGAAAGATTCCATATTaGAGCCAGCTGAGCCTGTGG +
Preference number: 4 (lower is better)
Translates to: IVSGQGGLSRMIPRSFEGRKIPY*SQLSLW
Trigger: CCACAGGCTCAGCTGGCTTCAATATGGAATCTTTCT...CCCCTCAAAGCTCCTAGGAATCATTCTCGACAATCCTCCCTGCCCCGAAACAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR TCA 90 bp CACCATGTGAAAGGAGAAGGACCTCTACACGACCACCAGCACAGCCTCCCGACATGGTCAATCGACATCTaGTATCTTGAAGTTTCCCTT +
Preference number: 4 (lower is better)
Translates to: HHVKGEGPLHDHQHSLPTWSIDI*YLEVSL
Trigger: AAGGGAAACTTCAAGATATCAGATGTCGATTGACCA...TGTCGGGAGGCTGTGCTGGTGGTCGTGTAGAGGTCCTTCTCCTTTCACATGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR TCA 90 bp TTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAGGAAAACACGCTGGTTCTTGGTGTTaGTGGAAAAGCCGACCCAGC +
Preference number: 4 (lower is better)
Translates to: FSDPRSHNETCSEDKGKHAGSWC*WKSRPS
Trigger: GCTGGGTCGGCTTTTCCATCAACACCAAGAACCAGC...GTGTTTTCCTTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR TCA 90 bp CATTGTAATTACCATTTATTGTACATCTACATGCACTGCCCCATGAGATTACAGCGGCACTTGGAACGGTaGGAGAGGGCTGGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: HCNYHLLYIYMHCPMRLQRHLER*ERAGLP
Trigger: GGGCAGCCCAGCCCTCTCTCACCGTTCCAAGTGCCG...CTGTAATCTCATGGGGCAGTGCATGTAGATGTACAATAAATGGTAATTACAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440794.2
CDS-3UTR TCA 90 bp TCCACCATGACTATGTCTCCTGGCTGGATAGTGATTTCATCATGGCTTCTGGATCAAGGATATAGGGCTTaGGCTTGTAGCCCCTCCACC +
Preference number: 4 (lower is better)
Translates to: STMTMSPGWIVISSWLLDQGYRA*ACSPST
Trigger: GGTGGAGGGGCTACAAGCTCAAGCCCTATATCCTTG...ATCCAGAAGCCATGATGAAATCACTATCCAGCCAGGAGACATAGTCATGGTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379960.9
CDS-3UTR TCA 90 bp AGCTGCTGCGTCCCACCAACAAAAATTCCCTTCCACCTAAAATTCCAGAAGTCACAAGGATATAGGGCTTaGGCTTGTAGCCCCTCCACC +
Preference number: 4 (lower is better)
Translates to: SCCVPPTKIPFHLKFQKSQGYRA*ACSPST
Trigger: GGTGGAGGGGCTACAAGCTCAAGCCCTATATCCTTG...TGACTTCTGGAATTTTAGGTGGAAGGGAATTTTTGTTGGTGGGACGCAGCAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR TCA 90 bp TATGGGATTTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAGCAAGGATATAGGGCTTaGGCTTGTAGCCCCTCCACC +
Preference number: 4 (lower is better)
Translates to: YGISATLEAIMRPVVRTKQGYRA*ACSPST
Trigger: GGTGGAGGGGCTACAAGCTCAAGCCCTATATCCTTG...CTTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAAATCCCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381318.8
ENST00000399367.7
CDS-3UTR TCA 90 bp ACTGAAGTGCAACTGAACGAGGAGGAGAGGTCCTCGCTCTCTGCACCATGTGAAAGTTCCAGAGCCCTCTaGATCTTTAAGCCTCACATA +
Preference number: 4 (lower is better)
Translates to: TEVQLNEEERSSLSAPCESSRAL*IFKPHI
Trigger: TATGTGAGGCTTAAAGATTCAGAGGGCTCTGGAACT...TTCACATGGTGCAGAGAGCGAGGACCTCTCCTCCTCGTTCAGTTGCACTTCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381291.8
ENST00000399352.5
CDS-3UTR TCA 90 bp GAAGGAACGGCTATAACGGTGCACATGCTGGAAACTTCCATAGACCAGCTCTTCGTTGCTCTTTCCATGTaGCCGACAGGGTTTCAACTC +
Preference number: 4 (lower is better)
Translates to: EGTAITVHMLETSIDQLFVALSM*PTGFQL
Trigger: GAGTTGAAACCCTGTCGGTCACATGGAAAGAGCAAC...GAAGAGCTGGTCTATGGAAGTTTCCAGCATGTGCACCGTTATAGCCGTTCCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000381318.8
CDS-3UTR TCA 90 bp CTATGGGATTTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAACCCTCTCGAACACAGTaGTGCAGAGGACTTCCTGCT +
Preference number: 4 (lower is better)
Translates to: LWDFSDPRSHNETCSEDKPSRTQ*CRGLPA
Trigger: AGCAGGAAGTCCTCTGCATCACTGTGTTCGAGAGGG...TTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAAATCCCATAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR TCA 90 bp TTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAGGAAAACACAGCCCTGGTCTTTCTTaGTGTCCGCCACACGGATCT +
Preference number: 4 (lower is better)
Translates to: FSDPRSHNETCSEDKGKHSPGLS*CPPHGS
Trigger: AGATCCGTGTGGCGGACATCAAGAAAGACCAGGGCT...GTGTTTTCCTTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR TCA 90 bp AAAAGGAATACAATTTCCAGACAGCATGTGTGGCCGTGGGCTGGGACCCTGCTGCCATATCCCTGTGACTaGATACCAAATGGTGGTTTC +
Preference number: 4 (lower is better)
Translates to: KRNTISRQHVWPWAGTLLPYPCD*IPNGGF
Trigger: GAAACCACCATTTGGTATTCAGTCACAGGGATATGG...CAGCAGGGTCCCAGCCCACGGCCACACATGCTGTCTGGAAATTGTATTCCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR TCA 90 bp TACAATTTCCAGACAGCATGTGTGGCCGTGGGCTGGGACCCTGCTGAGCACACCATAGTCATAAAGTCCTaGCTCTTGCAACAAGCATAT +
Preference number: 4 (lower is better)
Translates to: YNFQTACVAVGWDPAEHTIVIKS*LLQQAY
Trigger: ATATGCTTGTTGCAAGAGTCAGGACTTTATGACTAT...GGTGTGCTCAGCAGGGTCCCAGCCCACGGCCACACATGCTGTCTGGAAATTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR TCA 90 bp CAGGATTCAGCACATTCAAGCACAGAACAGGTCACCAGCAACGACTGCTGCTATTACAGCATAACCCTATaGCCAGCACAGCCCCTTCTT +
Preference number: 4 (lower is better)
Translates to: QDSAHSSTEQVTSNDCCYYSITL*PAQPLL
Trigger: AAGAAGGGGCTGTGCTGGTCATAGGGTTATGCTGTA...ATAGCAGCAGTCGTTGCTGGTGACCTGTTCTGTGCTTGAATGTGCTGAATCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR TCA 90 bp GTTGACCAGCCAATTACTTCCTCCGTGTCAGGTCTAACCAGAAGAGGTCTGCATGTCCCTAAAATGAACTaGGTGTCTACGTGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: VDQPITSSVSGLTRRGLHVPKMN*VSTCRR
Trigger: CCTCCTGCACGTAGACACTCAGTTCATTTTAGGGAC...ATGCAGACCTCTTCTGGTTAGACCTGACACGGAGGAAGTAATTGGCTGGTCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR TCA 90 bp TGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGGCCGTGGGCTGCTGGGCTACTGCACATaGAGTACAAGCCACTGCGAC +
Preference number: 4 (lower is better)
Translates to: WFLRKGIQFPDSMCGRGLLGYCT*STSHCD
Trigger: GTCGCAGTGGCTTGTACTTCATGTGCAGTAGCCCAG...CAGCCCACGGCCACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR TCA 90 bp GGGCACTTCTGGTGGCCAAGTACAGAAAGTCTGTGCCCCAGAAGCAGCCTGGACTCAATCAAATCCAGGTaGGATGAGTTTGCAATTTCT +
Preference number: 4 (lower is better)
Translates to: GHFWWPSTESLCPRSSLDSIKSR*DEFAIS
Trigger: AGAAATTGCAAACTCATCTCACCTGGATTTGATTGA...GTCCAGGCTGCTTCTGGGGCACAGACTTTCTGTACTTGGCCACCAGAAGTGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR TCA 90 bp AGCTGCTGCGTCCCACCAACAAAAATTCCCTTCCACCTAAAATTCCAGAAGTCAGGCCCAAGGGACAGTTaGCTGGCTGACTTGTTTCCA +
Preference number: 4 (lower is better)
Translates to: SCCVPPTKIPFHLKFQKSGPRDS*LADLFP
Trigger: TGGAAACAAGTCAGCCAGTCAACTGTCCCTTGGGCC...TGACTTCTGGAATTTTAGGTGGAAGGGAATTTTTGTTGGTGGGACGCAGCAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR TCA 90 bp CTGCACCATGTGAAAGGAGAAGGACCTCTACACGACCACCAGCACAGCCTCCCGTTAAAACAGAGATACTaGACTCCTCTGCACTTCTAT +
Preference number: 4 (lower is better)
Translates to: LHHVKGEGPLHDHQHSLPLKQRY*TPLHFY
Trigger: ATAGAAGTGCAGAGGAGTTCAGTATCTCTGTTTTAA...CGGGAGGCTGTGCTGGTGGTCGTGTAGAGGTCCTTCTCCTTTCACATGGTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR GCA 90 bp ACTGAAGTGCAACTGAACGAGGAGGAGAGGTCCTCGCTCTCTGCACCATGTGAAGAAATAGCAACTGGTTaGTGTTTCATGACAGGGGGA +
Preference number: 4 (lower is better)
Translates to: TEVQLNEEERSSLSAPCEEIATG*CFMTGG
Trigger: TCCCCCTGTCATGAAACAGCAACCAGTTGCTATTTC...TTCACATGGTGCAGAGAGCGAGGACCTCTCCTCCTCGTTCAGTTGCACTTCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR GCA 90 bp ACGCTATTAATGAAATGCCCCTGGAGAACACTTGCAGAACTTCCCGTAGTCCGGCTTTGGCAATGTGGCTaGAGGATGAGCAAATGCAGG +
Preference number: 4 (lower is better)
Translates to: TLLMKCPWRTLAELPVVRLWQCG*RMSKCR
Trigger: CCTGCATTTGCTCATCCTGCAGCCACATTGCCAAAG...CCGGACTACGGGAAGTTCTGCAAGTGTTCTCCAGGGGCATTTCATTAATAGCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR GCA 90 bp CTGCACCATGTGAAAGGAGAAGGACCTCTACACGACCACCAGCACAGCCTCCCGCAGGATAAATTCCTCTaGTGTAAGTTTTCCATCTTG +
Preference number: 4 (lower is better)
Translates to: LHHVKGEGPLHDHQHSLPQDKFL*CKFSIL
Trigger: CAAGATGGAAAACTTACAGCAGAGGAATTTATCCTG...CGGGAGGCTGTGCTGGTGGTCGTGTAGAGGTCCTTCTCCTTTCACATGGTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR GCA 90 bp ACCGACAGGGTTTCAACTCGATGCCTTCAACCACGTTCACCATCAACCTTCCAATCTCCAGTTCCAGGTTaGCACGTTCAAAGTTCTCCC +
Preference number: 4 (lower is better)
Translates to: TDRVSTRCLQPRSPSTFQSPVPG*HVQSSP
Trigger: GGGAGAACTTTGAACGTGGCAACCTGGAACTGGAGA...TTGGAAGGTTGATGGTGAACGTGGTTGAAGGCATCGAGTTGAAACCCTGTCGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381285.8
CDS-3UTR GCA 90 bp GGTTGCTCTTTCCATGTGACCGACAGGGTTTCAACTCGATGCCTTCAACCACGTCGCTGCTTTTCCAGTTaGTTCTCCAGTTCCAGTTGT +
Preference number: 4 (lower is better)
Translates to: GCSFHVTDRVSTRCLQPRRCFSS*FSSSSC
Trigger: ACAACTGGAACTGGAGAAGCAACTGGAAAAGCAGCG...ACGTGGTTGAAGGCATCGAGTTGAAACCCTGTCGGTCACATGGAAAGAGCAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381285.8
CDS-3UTR GCA 90 bp AGCACAGAACAGGTCACCAGCAACGACTGCTGCTATGAAATATCACAGGCCTCCCGCTGCTTTTCCAGTTaGTTCTCCAGTTCCAGTTGT +
Preference number: 4 (lower is better)
Translates to: STEQVTSNDCCYEISQASRCFSS*FSSSSC
Trigger: ACAACTGGAACTGGAGAAGCAACTGGAAAAGCAGCG...GGAGGCCTGTGATATTTCATAGCAGCAGTCGTTGCTGGTGACCTGTTCTGTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000381318.8
CDS-3UTR GCA 90 bp AACTCGATGCCTTCAACCACGTTCACCATCAACCTTCCAATGCCTGTTGCCCTTTGGTCTCGTAGGTGCTaGCGAGCTAGTTCTTTTGCT +
Preference number: 4 (lower is better)
Translates to: NSMPSTTFTINLPMPVALWSRRC*RASSFA
Trigger: AGCAAAAGAACTAGCTCGGCAGCACCTACGAGACCA...AAGGGCAACAGGCATTGGAAGGTTGATGGTGAACGTGGTTGAAGGCATCGAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381285.8
CDS-3UTR GCA 90 bp TTTAGACTAGCAGGACTCTCTGAAGAACCAGAATCCATGCTTGTAGACTTCCTTTGCTCGTCCTCCTGCTaGACATGCTCCAGCCACTGC +
Preference number: 4 (lower is better)
Translates to: FRLAGLSEEPESMLVDFLCSSSC*TCSSHC
Trigger: GCAGTGGCTGGAGCATGTGCAGCAGGAGGACGAGCA...AAGGAAGTCTACAAGCATGGATTCTGGTTCTTCAGAGAGTCCTGCTAGTCTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379960.9
CDS-3UTR GCA 90 bp GATAAATCTGAGACCGAACAAAAACACAGAGTGCTTTCTCATGTGGCTACAAGGTGCTCGTCCTCCTGCTaGACATGCTCCAGCCACTGC +
Preference number: 4 (lower is better)
Translates to: DKSETEQKHRVLSHVATRCSSSC*TCSSHC
Trigger: GCAGTGGCTGGAGCATGTGCAGCAGGAGGACGAGCA...CCTTGTAGCCACATGAGAAAGCACTCTGTGTTTTTGTTCGGTCTCAGATTTATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR GCA 90 bp AAAAGGAATACAATTTCCAGACAGCATGTGTGGCCGTGGGCTGGGACCCTGCTGTTTCTCTGCATAGTTTaGAGGGAACCACCCTGTCTT +
Preference number: 4 (lower is better)
Translates to: KRNTISRQHVWPWAGTLLFLCIV*REPPCL
Trigger: AAGACAGGGTGGTTCCCTGCAAACTATGCAGAGAAA...CAGCAGGGTCCCAGCCCACGGCCACACATGCTGTCTGGAAATTGTATTCCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR GCA 90 bp TCACTGGTTTCACTGGAGCGGGAACCTCATTTTCTGGGATTTTCTCTGCATAGTGTAAAGGCGGACCTCTaGCTTAACTGGCCGGCACTT +
Preference number: 4 (lower is better)
Translates to: SLVSLEREPHFLGFSLHSVKADL*LNWPAL
Trigger: AAGTGCCGGCCAGTTAAGGCAGAGGTCCGCCTTTAC...ACTATGCAGAGAAAATCCCAGAAAATGAGGTTCCCGCTCCAGTGAAACCAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379960.9
ENST00000419241.1
CDS-3UTR GCA 90 bp AAAAATCTCTGTGACCAGCTGCAGGTCATTCACATAGTTCTCCTCGGTGACAATAACGACCGGCTTGGCTaGTGGAGAGGCTACTCGCTT +
Preference number: 4 (lower is better)
Translates to: KNLCDQLQVIHIVLLGDNNDRLG*WRGYSL
Trigger: AAGCGAGTAGCCTCTCCAGCAGCCAAGCCGGTCGTT...ATTGTCACCGAGGAGAACTATGTGAATGACCTGCAGCTGGTCACAGAGATTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381285.8
CDS-3UTR GCA 90 bp TATGGGATTTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAGGCGCTTTTTCCCACGTaGTTGCAGCTCTCCTTCCCA +
Preference number: 4 (lower is better)
Translates to: YGISATLEAIMRPVVRTKALFPT*LQLSFP
Trigger: TGGGAAGGAGAGCTGCAAGCACGTGGGAAAAAGCGC...CTTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAAATCCCATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR GCA 90 bp CTTCTAGAACTTGAGGCTACTTACACAGAGGGATCTTTTCTCTCCTACCATCCCCATGTGCGGCAGCTGTaGGCTCAGGATGTCTCCAAT +
Preference number: 4 (lower is better)
Translates to: LLELEATYTEGSFLSYHPHVRQL*AQDVSN
Trigger: ATTGGAGACATCCTGAGCGCACAGCTGCCGCACATG...GGGATGGTAGGAGAGAAAAGATCCCTCTGTGTAAGTAGCCTCAAGTTCTAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR GCA 90 bp TTCAACTCGATGCCTTCAACCACGTTCACCATCAACCTTCCAATGCCTGTTGCCCCATCAACCTTCCAATaGCTGTTGCCCTTTGGGAAC +
Preference number: 4 (lower is better)
Translates to: FNSMPSTTFTINLPMPVAPSTFQ*LLPFGN
Trigger: GTTCCCAAAGGGCAACAGGCATTGGAAGGTTGATGG...GGCAACAGGCATTGGAAGGTTGATGGTGAACGTGGTTGAAGGCATCGAGTTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000420666.1
CDS-3UTR GCA 90 bp GGTTGCTCTTTCCATGTGACCGACAGGGTTTCAACTCGATGCCTTCAACCACGTAGGGTTTCAACTCGATaGCTTCAACCACGTTCACCA +
Preference number: 4 (lower is better)
Translates to: GCSFHVTDRVSTRCLQPRRVSTR*LQPRSP
Trigger: TGGTGAACGTGGTTGAAGGCATCGAGTTGAAACCCT...ACGTGGTTGAAGGCATCGAGTTGAAACCCTGTCGGTCACATGGAAAGAGCAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000420666.1
CDS-3UTR GCA 90 bp CTATGGGATTTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAACCCGTGGGGACTTCGTaGAGCAGAAGACACTTCGTA +
Preference number: 4 (lower is better)
Translates to: LWDFSDPRSHNETCSEDKPVGTS*SRRHFV
Trigger: TACGAAGTGTCTTCTGCTGCACGAAGTCCCCACGGG...TTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAAATCCCATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR GCA 90 bp AAAAGGAATACAATTTCCAGACAGCATGTGTGGCCGTGGGCTGGGACCCTGCTGGTCACCAGCAACGACTaGTGCTATGAAATATCACAG +
Preference number: 4 (lower is better)
Translates to: KRNTISRQHVWPWAGTLLVTSND*CYEISQ
Trigger: CTGTGATATTTCATAGCAGCAGTCGTTGCTGGTGAC...CAGCAGGGTCCCAGCCCACGGCCACACATGCTGTCTGGAAATTGTATTCCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000381318.8
CDS-3UTR GCA 90 bp TTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAGGAAAACACATCAGGATGCCGGGATaGAGTGGCCTAGAGAACTCC +
Preference number: 4 (lower is better)
Translates to: FSDPRSHNETCSEDKGKHIRMPG*SGLENS
Trigger: GGAGTTCTCTAGGCCACTGCATCCCGGCATCCTGAT...GTGTTTTCCTTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR GCA 90 bp CTTATGGTGGCTCAGACTATACTGTCTGAGGGCTTCATCATGCTACCGGTTTCTCTGAGGGCTTCATCATaGTACCGGTTTCTGGGGCTA +
Preference number: 4 (lower is better)
Translates to: LMVAQTILSEGFIMLPVSLRASS*YRFLGL
Trigger: TAGCCCCAGAAACCGGTAGCATGATGAAGCCCTCAG...AGAAACCGGTAGCATGATGAAGCCCTCAGACAGTATAGTCTGAGCCACCATAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR GCA 90 bp TGTCCTACAACAATCAGGATTCAGCACATTCAAGCACAGAACAGGTCACCAGCATTAGGCTTGCTTGAATaGCACCAAGGCAGGCCCGTC +
Preference number: 4 (lower is better)
Translates to: CPTTIRIQHIQAQNRSPALGLLE*HQGRPV
Trigger: GACGGGCCTGCCTTGGTGGCATTCAAGCAAGCCTAA...TGCTGGTGACCTGTTCTGTGCTTGAATGTGCTGAATCCTGATTGTTGTAGGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR GCA 90 bp CTTCTAGAACTTGAGGCTACTTACACAGAGGGATCTTTTCTCTCCTACCATCCCAGCCACAAGGGGCTATaGACTCAGAAGGGACCTGAG +
Preference number: 4 (lower is better)
Translates to: LLELEATYTEGSFLSYHPSHKGL*TQKGPE
Trigger: CTCAGGTCCCTTCTGAGTGCATAGCCCCTTGTGGCT...GGGATGGTAGGAGAGAAAAGATCCCTCTGTGTAAGTAGCCTCAAGTTCTAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR GCA 90 bp CTGCACCATGTGAAAGGAGAAGGACCTCTACACGACCACCAGCACAGCCTCCCGAACAAAAACACAGAGTaGTTTCTCATGTGGCTACAA +
Preference number: 4 (lower is better)
Translates to: LHHVKGEGPLHDHQHSLPNKNTE*FLMWLQ
Trigger: TTGTAGCCACATGAGAAAGCACTCTGTGTTTTTGTT...CGGGAGGCTGTGCTGGTGGTCGTGTAGAGGTCCTTCTCCTTTCACATGGTGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CCA 90 bp TTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAGGAAAACACAACAGCTGTAAGCGGTaGCATGCTGGCGATACCTCC +
Preference number: 4 (lower is better)
Translates to: FSDPRSHNETCSEDKGKHNSCKR*HAGDTS
Trigger: GGAGGTATCGCCAGCATGCCACCGCTTACAGCTGTT...GTGTTTTCCTTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CCA 90 bp AACAGGGCTTCAGCTACAGCATATCTAACACACAAACGGACCATGAGCTCCATTAACAGCTGTAAGCGGTaGCATGCTGGCGATACCTCC +
Preference number: 4 (lower is better)
Translates to: NRASATAYLTHKRTMSSINSCKR*HAGDTS
Trigger: GGAGGTATCGCCAGCATGCCACCGCTTACAGCTGTT...AATGGAGCTCATGGTCCGTTTGTGTGTTAGATATGCTGTAGCTGAAGCCCTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CCA 90 bp CTATGGGATTTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAAACAGCTGTAAGCGGTaGCATGCTGGCGATACCTCC +
Preference number: 4 (lower is better)
Translates to: LWDFSDPRSHNETCSEDKNSCKR*HAGDTS
Trigger: GGAGGTATCGCCAGCATGCCACCGCTTACAGCTGTT...TTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAAATCCCATAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CCA 90 bp TGTCCTACAACAATCAGGATTCAGCACATTCAAGCACAGAACAGGTCACCAGCAGGATCCCATTGGCACTaGAGCAACAGCTGTAAGCGG +
Preference number: 4 (lower is better)
Translates to: CPTTIRIQHIQAQNRSPAGSHWH*SNSCKR
Trigger: CCGCTTACAGCTGTTGCTCCAGTGCCAATGGGATCC...TGCTGGTGACCTGTTCTGTGCTTGAATGTGCTGAATCCTGATTGTTGTAGGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CCA 90 bp GTTTCTAAACTCACACCAAGGACTGGGCATTGTAGGCCAAGAAGTCTACTTGGGCCACTGGTGGGACACTaGCCACATCAAATGACTGTG +
Preference number: 4 (lower is better)
Translates to: VSKLTPRTGHCRPRSLLGPLVGH*PHQMTV
Trigger: CACAGTCATTTGATGTGGCCAGTGTCCCACCAGTGG...CCCAAGTAGACTTCTTGGCCTACAATGCCCAGTCCTTGGTGTGAGTTTAGAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000381318.8
CDS-3UTR CCA 90 bp CTATGGGATTTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAACCACTCTGCCACTGGTaGGACACTGGCCACATCAAA +
Preference number: 4 (lower is better)
Translates to: LWDFSDPRSHNETCSEDKPLCHW*DTGHIK
Trigger: TTTGATGTGGCCAGTGTCCCACCAGTGGCAGAGTGG...TTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAAATCCCATAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CCA 90 bp AGACTGTGGATATCGTTGATCGTAACGACCTCAGTGGTGTTGTCTACTGATTTTAGCCCACTCTGCCACTaGTGGGACACTGGCCACATC +
Preference number: 4 (lower is better)
Translates to: RLWISLIVTTSVVLSTDFSPLCH*WDTGHI
Trigger: GATGTGGCCAGTGTCCCACCAGTGGCAGAGTGGGCT...AAAATCAGTAGACAACACCACTGAGGTCGTTACGATCAACGATATCCACAGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CCA 90 bp GCTTTGAGGGGCCTGTCTTTGCCATCCCATATCCCTGTGACTGAATACCAAATGACAGGTGGCAGTGGTTaGCCAGACATAGCTACATCA +
Preference number: 4 (lower is better)
Translates to: ALRGLSLPSHIPVTEYQMTGGSG*PDIATS
Trigger: TGATGTAGCTATGTCTGGCCAACCACTGCCACCTGT...CATTTGGTATTCAGTCACAGGGATATGGGATGGCAAAGACAGGCCCCTCAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CCA 90 bp AACAGGGCTTCAGCTACAGCATATCTAACACACAAACGGACCATGAGCTCCATTCAGGACAGGTGGCAGTaGTTGGCCAGACATAGCTAC +
Preference number: 4 (lower is better)
Translates to: NRASATAYLTHKRTMSSIQDRWQ*LARHSY
Trigger: GTAGCTATGTCTGGCCAACCACTGCCACCTGTCCTG...AATGGAGCTCATGGTCCGTTTGTGTGTTAGATATGCTGTAGCTGAAGCCCTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CCA 90 bp TGGGGGCAGGGGCAGATGTTGAATCAGTCACTGGTTTCACTGGAGCGGGAACCTAATTGTTGCTGTAGATaGGTGATTTCGGCAATTCTC +
Preference number: 4 (lower is better)
Translates to: WGQGQMLNQSLVSLEREPNCCCR*VISAIL
Trigger: GAGAATTGCCGAAATCACCCATCTACAGCAACAATT...AGGTTCCCGCTCCAGTGAAACCAGTGACTGATTCAACATCTGCCCCTGCCCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379960.9
CDS-3UTR CCA 90 bp GGCTCTGAAGAGGTTACTGCCAAAGGGGCGGGGGTCTCACGCAAGGCCAGTTTGGAGTATCTGTTTTTCTaGAATAAGTCTTCCAAGCAT +
Preference number: 4 (lower is better)
Translates to: GSEEVTAKGAGVSRKASLEYLFF*NKSSKH
Trigger: ATGCTTGGAAGACTTATTCCAGAAAAACAGATACTC...CAAACTGGCCTTGCGTGAGACCCCCGCCCCTTTGGCAGTAACCTCTTCAGAGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000379960.9
CDS-3UTR CCA 90 bp CTGCACCATGTGAAAGGAGAAGGACCTCTACACGACCACCAGCACAGCCTCCCGATGGACTTTTGCTTCTaGAGTTGTTGCTTATTGTGT +
Preference number: 4 (lower is better)
Translates to: LHHVKGEGPLHDHQHSLPMDFCF*SCCLLC
Trigger: ACACAATAAGCAACAACTCCAGAAGCAAAAGTCCAT...CGGGAGGCTGTGCTGGTGGTCGTGTAGAGGTCCTTCTCCTTTCACATGGTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CCA 90 bp CACCATGTGAAAGGAGAAGGACCTCTACACGACCACCAGCACAGCCTCCCGACAATAGTGATTTCATCATaGCTTCTGGATTCAAAGGGG +
Preference number: 4 (lower is better)
Translates to: HHVKGEGPLHDHQHSLPTIVISS*LLDSKG
Trigger: CCCCTTTGAATCCAGAAGCCATGATGAAATCACTAT...TGTCGGGAGGCTGTGCTGGTGGTCGTGTAGAGGTCCTTCTCCTTTCACATGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CCA 90 bp CTGCCCATGCATCCCAGTTATCCGTTTCTGGTTTCTCATTCGTGCTGGTGGGCCACTATGTCTCCTGGCTaGATAGTGATTTCATCATGG +
Preference number: 4 (lower is better)
Translates to: LPMHPSYPFLVSHSCWWATMSPG*IVISSW
Trigger: CCATGATGAAATCACTATCCAGCCAGGAGACATAGT...GGCCCACCAGCACGAATGAGAAACCAGAAACGGATAACTGGGATGCATGGGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379960.9
ENST00000419241.1
CDS-3UTR CCA 90 bp GCTGCCCATGCATCCCAGTTATCCGTTTCTGGTTTCTCATTCGTGCTGGTGGGCCATGACTATGTCTCCTaGCTGGATAGTGATTTCATC +
Preference number: 4 (lower is better)
Translates to: AAHASQLSVSGFSFVLVGHDYVS*LDSDFI
Trigger: GATGAAATCACTATCCAGCCAGGAGACATAGTCATG...GCCCACCAGCACGAATGAGAAACCAGAAACGGATAACTGGGATGCATGGGCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379960.9
ENST00000419241.1
CDS-3UTR CCA 90 bp ATTGTTTCGGGGCAGGGAGGATTGTCGAGAATGATTCCTAGGAGCTTTGAGGGGAGTCACTGGTTTCACTaGAGCGGGAACCTCATTTTC +
Preference number: 4 (lower is better)
Translates to: IVSGQGGLSRMIPRSFEGSHWFH*SGNLIF
Trigger: GAAAATGAGGTTCCCGCTCCAGTGAAACCAGTGACT...CCCCTCAAAGCTCCTAGGAATCATTCTCGACAATCCTCCCTGCCCCGAAACAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CCA 90 bp CAACCAGATAAATCTGAGACCGAACAAAAACACAGAGTGCTTTCTCATGTGGCTCACGCAAGGCCAGTTTaGGGGCAGGGGCAGATGTTG +
Preference number: 4 (lower is better)
Translates to: QPDKSETEQKHRVLSHVAHARPV*GQGQML
Trigger: CAACATCTGCCCCTGCCCCCAAACTGGCCTTGCGTG...AGCCACATGAGAAAGCACTCTGTGTTTTTGTTCGGTCTCAGATTTATCTGGTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CCA 90 bp GATAAATCTGAGACCGAACAAAAACACAGAGTGCTTTCTCATGTGGCTACAAGGCACGCAAGGCCAGTTTaGGGGCAGGGGCAGATGTTG +
Preference number: 4 (lower is better)
Translates to: DKSETEQKHRVLSHVATRHARPV*GQGQML
Trigger: CAACATCTGCCCCTGCCCCCAAACTGGCCTTGCGTG...CCTTGTAGCCACATGAGAAAGCACTCTGTGTTTTTGTTCGGTCTCAGATTTATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CCA 90 bp ACTGAAGTGCAACTGAACGAGGAGGAGAGGTCCTCGCTCTCTGCACCATGTGAACCAGTTATCCGTTTCTaGTTTCTCATTCGTGCTGGT +
Preference number: 4 (lower is better)
Translates to: TEVQLNEEERSSLSAPCEPVIRF*FLIRAG
Trigger: ACCAGCACGAATGAGAAACCAGAAACGGATAACTGG...TTCACATGGTGCAGAGAGCGAGGACCTCTCCTCCTCGTTCAGTTGCACTTCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CCA 90 bp TGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGGCCGTGGGCTGTGCTTCAAGTGGCTGTaGTCCGGGTGGTTTTCAGGG +
Preference number: 4 (lower is better)
Translates to: WFLRKGIQFPDSMCGRGLCFKWL*SGWFSG
Trigger: CCCTGAAAACCACCCGGACCACAGCCACTTGAAGCA...CAGCCCACGGCCACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CCA 90 bp TGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGGCCGTGGGCTGGGGAGATGTGGAAGATaGGCTCGTCTCCAGAAGGGT +
Preference number: 4 (lower is better)
Translates to: WFLRKGIQFPDSMCGRGLGRCGR*ARLQKG
Trigger: ACCCTTCTGGAGACGAGCCCATCTTCCACATCTCCC...CAGCCCACGGCCACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CCA 90 bp CTTATGGTGGCTCAGACTATACTGTCTGAGGGCTTCATCATGCTACCGGTTTCTATCGTCTTGGTGATGTaGCACTGGGAACCCATGGTC +
Preference number: 4 (lower is better)
Translates to: LMVAQTILSEGFIMLPVSIVLVM*HWEPMV
Trigger: GACCATGGGTTCCCAGTGCCACATCACCAAGACGAT...AGAAACCGGTAGCATGATGAAGCCCTCAGACAGTATAGTCTGAGCCACCATAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CCA 90 bp AGCACAGAACAGGTCACCAGCAACGACTGCTGCTATGAAATATCACAGGCCTCCAGTTGGAATTCCACTTaGGGTTCAGAGTGTCCTGGA +
Preference number: 4 (lower is better)
Translates to: STEQVTSNDCCYEISQASSWNST*GSECPG
Trigger: TCCAGGACACTCTGAACCCCAAGTGGAATTCCAACT...GGAGGCCTGTGATATTTCATAGCAGCAGTCGTTGCTGGTGACCTGTTCTGTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000381318.8
CDS-3UTR CCA 90 bp ATTGTTTCGGGGCAGGGAGGATTGTCGAGAATGATTCCTAGGAGCTTTGAGGGGAGTTGGAATTCCACTTaGGGTTCAGAGTGTCCTGGA +
Preference number: 4 (lower is better)
Translates to: IVSGQGGLSRMIPRSFEGSWNST*GSECPG
Trigger: TCCAGGACACTCTGAACCCCAAGTGGAATTCCAACT...CCCCTCAAAGCTCCTAGGAATCATTCTCGACAATCCTCCCTGCCCCGAAACAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CCA 90 bp GTTGACCAGCCAATTACTTCCTCCGTGTCAGGTCTAACCAGAAGAGGTCTGCATAAGACACTTCGTAACTaGACCTTTGGAGCCCTGGTC +
Preference number: 4 (lower is better)
Translates to: VDQPITSSVSGLTRRGLHKTLRN*TFGALV
Trigger: GACCAGGGCTCCAAAGGTCCAGTTACGAAGTGTCTT...ATGCAGACCTCTTCTGGTTAGACCTGACACGGAGGAAGTAATTGGCTGGTCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CCA 90 bp TGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGGCCGTGGGCTGCCACAATCTCTCCCGTaGGGACTTCGTGCAGCAGAA +
Preference number: 4 (lower is better)
Translates to: WFLRKGIQFPDSMCGRGLPQSLP*GLRAAE
Trigger: TTCTGCTGCACGAAGTCCCCACGGGAGAGATTGTGG...CAGCCCACGGCCACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CCA 90 bp ATTGTTTCGGGGCAGGGAGGATTGTCGAGAATGATTCCTAGGAGCTTTGAGGGGGCCAAGAAGTCTACTTaGGGACTGGTGGATGTAAGA +
Preference number: 4 (lower is better)
Translates to: IVSGQGGLSRMIPRSFEGAKKST*GLVDVR
Trigger: TCTTACATCCACCAGTCCCCAAGTAGACTTCTTGGC...CCCCTCAAAGCTCCTAGGAATCATTCTCGACAATCCTCCCTGCCCCGAAACAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000381318.8
CDS-3UTR CCA 90 bp CTATGGGATTTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAGGGTGTCTAAAAGGCTaGGATCAGGATGCCGGGATG +
Preference number: 4 (lower is better)
Translates to: LWDFSDPRSHNETCSEDKGCLKG*DQDAGM
Trigger: CATCCCGGCATCCTGATCCCAGCCTTTTAGACACCC...TTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAAATCCCATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CCA 90 bp CTTCTAGAACTTGAGGCTACTTACACAGAGGGATCTTTTCTCTCCTACCATCCCGAGAAGCTAGCAGTGTaGCTCAGAGCAGAGGAACGC +
Preference number: 4 (lower is better)
Translates to: LLELEATYTEGSFLSYHPEKLAV*LRAEER
Trigger: GCGTTCCTCTGCTCTGAGCCACACTGCTAGCTTCTC...GGGATGGTAGGAGAGAAAAGATCCCTCTGTGTAAGTAGCCTCAAGTTCTAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CCA 90 bp AGCCAAAAGAGATTTTTCCAACATGGCTGCCAACCGAGACCCAGTGACCCAACAAGAGGGACCAGGATGTaGACTCTGCCTTCTAGAGAA +
Preference number: 4 (lower is better)
Translates to: SQKRFFQHGCQPRPSDPTRGTRM*TLPSRE
Trigger: TTCTCTAGAAGGCAGAGTCCACATCCTGGTCCCTCT...TGTTGGGTCACTGGGTCTCGGTTGGCAGCCATGTTGGAAAAATCTCTTTTGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CCA 90 bp ATTGTTTCGGGGCAGGGAGGATTGTCGAGAATGATTCCTAGGAGCTTTGAGGGGGTAAACAAGCATATCTaGACCAAGCAGACCTGCTGC +
Preference number: 4 (lower is better)
Translates to: IVSGQGGLSRMIPRSFEGVNKHI*TKQTCC
Trigger: GCAGCAGGTCTGCTTGGTCCAGATATGCTTGTTTAC...CCCCTCAAAGCTCCTAGGAATCATTCTCGACAATCCTCCCTGCCCCGAAACAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CCA 90 bp GGGATTTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAGGAAGTGAGCCACCGCACCTaGCCGGTTTGCATTATTTCT +
Preference number: 4 (lower is better)
Translates to: GISATLEAIMRPVVRTKEVSHRT*PVCIIS
Trigger: AGAAATAATGCAAACCGGCCAGGTGCGGTGGCTCAC...TTCCTTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAAATCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CCA 90 bp AAAGCTGATGCAGAAAGGGTGGGAAGCCTGAGGACCTCCGTGCAGCCCCAGCCTCATCAGGAAATTTCATaGAAAACGCAAACGCTAATT +
Preference number: 4 (lower is better)
Translates to: KADAERVGSLRTSVQPQPHQEIS*KTQTLI
Trigger: AATTAGCGTTTGCGTTTTCCATGAAATTTCCTGATG...AGGCTGGGGCTGCACGGAGGTCCTCAGGCTTCCCACCCTTTCTGCATCAGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CCA 90 bp TGTCCTACAACAATCAGGATTCAGCACATTCAAGCACAGAACAGGTCACCAGCACCCCTGGGGTCTCCATaGAAACATGGGCATCCAGAA +
Preference number: 4 (lower is better)
Translates to: CPTTIRIQHIQAQNRSPAPLGSP*KHGHPE
Trigger: TTCTGGATGCCCATGTTTCCATGGAGACCCCAGGGG...TGCTGGTGACCTGTTCTGTGCTTGAATGTGCTGAATCCTGATTGTTGTAGGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CCA 90 bp GGGATTTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAGGAAAGAATCCTCCTTAGGTaGCCTAAGGGGCACTTCTGG +
Preference number: 4 (lower is better)
Translates to: GISATLEAIMRPVVRTKERILLR*PKGHFW
Trigger: CCAGAAGTGCCCCTTAGGCCACCTAAGGAGGATTCT...TTCCTTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAAATCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CCA 90 bp CACCATGTGAAAGGAGAAGGACCTCTACACGACCACCAGCACAGCCTCCCGACACACCTTCGCTTTAATTaGGCTCATTCTATACGTCTT +
Preference number: 4 (lower is better)
Translates to: HHVKGEGPLHDHQHSLPTHLRFN*AHSIRL
Trigger: AAGACGTATAGAATGAGCCCAATTAAAGCGAAGGTG...TGTCGGGAGGCTGTGCTGGTGGTCGTGTAGAGGTCCTTCTCCTTTCACATGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CCA 90 bp CTGCACCATGTGAAAGGAGAAGGACCTCTACACGACCACCAGCACAGCCTCCCGACTAAAAAGAGACTGTaGATATCGTTGATCGTAACG +
Preference number: 4 (lower is better)
Translates to: LHHVKGEGPLHDHQHSLPTKKRL*ISLIVT
Trigger: CGTTACGATCAACGATATCCACAGTCTCTTTTTAGT...CGGGAGGCTGTGCTGGTGGTCGTGTAGAGGTCCTTCTCCTTTCACATGGTGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
3UTR CAA 72 bp AGAAATTTGCGCGGCCCCAAGCAATTGGTCACTGAATaGAACACAAGTTGCTCAGACAGGCCTTCACACTGC +
Preference number: 4 (lower is better)
Translates to: RNLRGPKQLVTE*NTSCSDRPSHC
Trigger: GCAGTGTGAAGGCCTGTCTGAGCAACTTGTGTTCAATTCAGTGACCAATTGCTTGGGGCCGCGCAAATTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381285.8
CDS-3UTR TCA 90 bp ACTGAAGTGCAACTGAACGAGGAGGAGAGGTCCTCGCTCTCTGCACCATGTGAAAAAGGTGTTGGAAACTaGGCCATGGTTCTGTTACTT +
Preference number: 4 (lower is better)
Translates to: TEVQLNEEERSSLSAPCEKGVGN*AMVLLL
Trigger: AAGTAACAGAACCATGGCTCAGTTTCCAACACCTTT...TTCACATGGTGCAGAGAGCGAGGACCTCTCCTCCTCGTTCAGTTGCACTTCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR TCA 90 bp CTTCAACCACGTTCACCATCAACCTTCCAATGCCTGTTGCCCTTTGGGAACGGAAAACTATGGAACTGCTaGTCATGCTTCGCTCTTTCC +
Preference number: 4 (lower is better)
Translates to: LQPRSPSTFQCLLPFGNGKLWNC*SCFALS
Trigger: GGAAAGAGCGAAGCATGATCAGCAGTTCCATAGTTT...TCCGTTCCCAAAGGGCAACAGGCATTGGAAGGTTGATGGTGAACGTGGTTGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381285.8
CDS-3UTR TCA 90 bp GAAACTTCCATAGACCAGCTCTTCAAAGAGCTAAGCCAGGGCCTGATCAGACCGAAACTATGGAACTGCTaGTCATGCTTCGCTCTTTCC +
Preference number: 4 (lower is better)
Translates to: ETSIDQLFKELSQGLIRPKLWNC*SCFALS
Trigger: GGAAAGAGCGAAGCATGATCAGCAGTTCCATAGTTT...CGGTCTGATCAGGCCCTGGCTTAGCTCTTTGAAGAGCTGGTCTATGGAAGTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000381318.8
CDS-3UTR TCA 90 bp CACCATGTGAAAGGAGAAGGACCTCTACACGACCACCAGCACAGCCTCCCGACAATGGAAAACTCCACTTaGTCCATTCTTCCATCATTA +
Preference number: 4 (lower is better)
Translates to: HHVKGEGPLHDHQHSLPTMENST*SILPSL
Trigger: TAATGATGGAAGAATGGATCAAGTGGAGTTTTCCAT...TGTCGGGAGGCTGTGCTGGTGGTCGTGTAGAGGTCCTTCTCCTTTCACATGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR TCA 90 bp CTGCTGTTCCAGGAGAGCTTGCCTTCGTTTCTCCAGTTCCAGGTTGCCACGTTCCTGATCTACAGATGTTaGGCTTATGACAGATATACC +
Preference number: 4 (lower is better)
Translates to: LLFQESLPSFLQFQVATFLIYRC*AYDRYT
Trigger: GGTATATCTGTCATAAGCTCAACATCTGTAGATCAG...GAACGTGGCAACCTGGAACTGGAGAAACGAAGGCAAGCTCTCCTGGAACAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379960.9
CDS-3UTR TCA 90 bp ATTGTTTCGGGGCAGGGAGGATTGTCGAGAATGATTCCTAGGAGCTTTGAGGGGGTTGCTGTAGATGGGTaGTTTCGGCAATTCTCAACT +
Preference number: 4 (lower is better)
Translates to: IVSGQGGLSRMIPRSFEGVAVDG*FRQFST
Trigger: AGTTGAGAATTGCCGAAATCACCCATCTACAGCAAC...CCCCTCAAAGCTCCTAGGAATCATTCTCGACAATCCTCCCTGCCCCGAAACAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR TCA 90 bp AGCACAGAACAGGTCACCAGCAACGACTGCTGCTATGAAATATCACAGGCCTCCGTTGCTGTAGATGGGTaGTTTCGGCAATTCTCAACT +
Preference number: 4 (lower is better)
Translates to: STEQVTSNDCCYEISQASVAVDG*FRQFST
Trigger: AGTTGAGAATTGCCGAAATCACCCATCTACAGCAAC...GGAGGCCTGTGATATTTCATAGCAGCAGTCGTTGCTGGTGACCTGTTCTGTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000381318.8
CDS-3UTR TCA 90 bp CGATGCCTTCAACCACGTTCACCATCAACCTTCCAATGCCTGTTGCCCTTTGGGCTTCCAAGCATTTGCTaGGATTCCTGTAATTGTTGC +
Preference number: 4 (lower is better)
Translates to: RCLQPRSPSTFQCLLPFGLPSIC*DSCNCC
Trigger: GCAACAATTACAGGAATCTCAGCAAATGCTTGGAAG...CCCAAAGGGCAACAGGCATTGGAAGGTTGATGGTGAACGTGGTTGAAGGCATCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381285.8
CDS-3UTR TCA 90 bp TCCACCATGACTATGTCTCCTGGCTGGATAGTGATTTCATCATGGCTTCTGGATGGCAGGGGCAGATGTTaGATCAGTCACTGGTTTCAC +
Preference number: 4 (lower is better)
Translates to: STMTMSPGWIVISSWLLDGRGRC*ISHWFH
Trigger: GTGAAACCAGTGACTGATTCAACATCTGCCCCTGCC...ATCCAGAAGCCATGATGAAATCACTATCCAGCCAGGAGACATAGTCATGGTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379960.9
CDS-3UTR TCA 90 bp AGACTGTGGATATCGTTGATCGTAACGACCTCAGTGGTGTTGTCTACTGATTTTGGTCGTGGAGGGCTCTaGAGAGGTTACTGCCAAAGG +
Preference number: 4 (lower is better)
Translates to: RLWISLIVTTSVVLSTDFGRGGL*RGYCQR
Trigger: CCTTTGGCAGTAACCTCTTCAGAGCCCTCCACGACC...AAAATCAGTAGACAACACCACTGAGGTCGTTACGATCAACGATATCCACAGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR TCA 90 bp CCAAATGGTGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGGCCGGTCGTGGAGGGCTCTaGAGAGGTTACTGCCAAAGG +
Preference number: 4 (lower is better)
Translates to: PNGGFLEKEYNFQTACVAGRGGL*RGYCQR
Trigger: CCTTTGGCAGTAACCTCTTCAGAGCCCTCCACGACC...GGCCACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCACCATTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR TCA 90 bp CAGGATTCAGCACATTCAAGCACAGAACAGGTCACCAGCAACGACTGCTGCTATACTAGCAGGACTCTCTaGAGAACCAGAATCCATGCT +
Preference number: 4 (lower is better)
Translates to: QDSAHSSTEQVTSNDCCYTSRTL*RTRIHA
Trigger: AGCATGGATTCTGGTTCTTCAGAGAGTCCTGCTAGT...ATAGCAGCAGTCGTTGCTGGTGACCTGTTCTGTGCTTGAATGTGCTGAATCCTG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000381318.8
CDS-3UTR TCA 90 bp GCTTTGAGGGGCCTGTCTTTGCCATCCCATATCCCTGTGACTGAATACCAAATGACTAGCAGGACTCTCTaGAGAACCAGAATCCATGCT +
Preference number: 4 (lower is better)
Translates to: ALRGLSLPSHIPVTEYQMTSRTL*RTRIHA
Trigger: AGCATGGATTCTGGTTCTTCAGAGAGTCCTGCTAGT...CATTTGGTATTCAGTCACAGGGATATGGGATGGCAAAGACAGGCCCCTCAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR TCA 90 bp AACCACGTTCACCATCAACCTTCCAATGCCTGTTGCCCTTTGGGAACGGACCAGCAAGCAATTGGTCACTaGATTGAACACAAGTTGCTC +
Preference number: 4 (lower is better)
Translates to: NHVHHQPSNACCPLGTDQQAIGH*IEHKLL
Trigger: GAGCAACTTGTGTTCAATTCAGTGACCAATTGCTTG...CTGGTCCGTTCCCAAAGGGCAACAGGCATTGGAAGGTTGATGGTGAACGTGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381285.8
CDS-3UTR TCA 90 bp TTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAGGAAAACACAAAGGCTTCGTGATCTaGGTCAGCAGGAGGAAGTCG +
Preference number: 4 (lower is better)
Translates to: FSDPRSHNETCSEDKGKHKGFVI*VSRRKS
Trigger: CGACTTCCTCCTGCTGACTCAGATCACGAAGCCTTT...GTGTTTTCCTTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR TCA 90 bp TGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGGCCGTGGGCTGGGTTTGATTTGGGGCTaGAGACTTTGTCGGTGCCAG +
Preference number: 4 (lower is better)
Translates to: WFLRKGIQFPDSMCGRGLGLIWG*RLCRCQ
Trigger: CTGGCACCGACAAAGTCTTCAGCCCCAAATCAAACC...CAGCCCACGGCCACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR TCA 90 bp CTTATGGTGGCTCAGACTATACTGTCTGAGGGCTTCATCATGCTACCGGTTTCTGTTGCTCTTTCCATGTaGCCGACAGGGTTTCAACTC +
Preference number: 4 (lower is better)
Translates to: LMVAQTILSEGFIMLPVSVALSM*PTGFQL
Trigger: GAGTTGAAACCCTGTCGGTCACATGGAAAGAGCAAC...AGAAACCGGTAGCATGATGAAGCCCTCAGACAGTATAGTCTGAGCCACCATAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR TCA 90 bp GAAGGAACGGCTATAACGGTGCACATGCTGGAAACTTCCATAGACCAGCTCTTCCATCCCATATCCCTGTaGCTGAATACCAAATGGTGG +
Preference number: 4 (lower is better)
Translates to: EGTAITVHMLETSIDQLFHPISL*LNTKWW
Trigger: CCACCATTTGGTATTCAGTCACAGGGATATGGGATG...GAAGAGCTGGTCTATGGAAGTTTCCAGCATGTGCACCGTTATAGCCGTTCCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000381318.8
CDS-3UTR TCA 90 bp GTTGACCAGCCAATTACTTCCTCCGTGTCAGGTCTAACCAGAAGAGGTCTGCATCTTGAAATCTGCCAGTaGAAACAGCGAGTTTCCTCC +
Preference number: 4 (lower is better)
Translates to: VDQPITSSVSGLTRRGLHLEICQ*KQRVSS
Trigger: GGAGGAAACTCGCTGTTTTCACTGGCAGATTTCAAG...ATGCAGACCTCTTCTGGTTAGACCTGACACGGAGGAAGTAATTGGCTGGTCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR TCA 90 bp GAAGGAACGGCTATAACGGTGCACATGCTGGAAACTTCCATAGACCAGCTCTTCGACCCTGCTTCTCTTTaGAGGCAGAAGGTTGGAAAA +
Preference number: 4 (lower is better)
Translates to: EGTAITVHMLETSIDQLFDPASL*RQKVGK
Trigger: TTTTCCAACCTTCTGCCTTCAAAGAGAAGCAGGGTC...GAAGAGCTGGTCTATGGAAGTTTCCAGCATGTGCACCGTTATAGCCGTTCCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR TCA 90 bp GTTTCTAAACTCACACCAAGGACTGGGCATTGTAGGCCAAGAAGTCTACTTGGGCACCACCTATACGTGTaGGGGTACAAAGCTGATGGA +
Preference number: 4 (lower is better)
Translates to: VSKLTPRTGHCRPRSLLGHHLYV*GYKADG
Trigger: TCCATCAGCTTTGTACCCTCACACGTATAGGTGGTG...CCCAAGTAGACTTCTTGGCCTACAATGCCCAGTCCTTGGTGTGAGTTTAGAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR TCA 90 bp ACAGAATCCTCCTTAGGTGGCCTAAGGGGCACTTCTGGTGGCCAAGTACAGAAACAGGGGTTTAGACATTaGGTTTCACAGAATCCTCCT +
Preference number: 4 (lower is better)
Translates to: TESSLGGLRGTSGGQVQKQGFRH*VSQNPP
Trigger: AGGAGGATTCTGTGAAACTCAATGTCTAAACCCCTG...TTTCTGTACTTGGCCACCAGAAGTGCCCCTTAGGCCACCTAAGGAGGATTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR TCA 90 bp TCCACCATGACTATGTCTCCTGGCTGGATAGTGATTTCATCATGGCTTCTGGATGGCTTTCATCCACCATaGCTATGTCTCCTGGCTGGA +
Preference number: 4 (lower is better)
Translates to: STMTMSPGWIVISSWLLDGFHPP*LCLLAG
Trigger: TCCAGCCAGGAGACATAGTCATGGTGGATGAAAGCC...ATCCAGAAGCCATGATGAAATCACTATCCAGCCAGGAGACATAGTCATGGTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379960.9
CDS-3UTR TCA 90 bp ACTGAAGTGCAACTGAACGAGGAGGAGAGGTCCTCGCTCTCTGCACCATGTGAATCAACAAGGTACAGCTaGTACACACAAACAAGCACA +
Preference number: 4 (lower is better)
Translates to: TEVQLNEEERSSLSAPCESTRYS*YTQTST
Trigger: TGTGCTTGTTTGTGTGTATCAGCTGTACCTTGTTGA...TTCACATGGTGCAGAGAGCGAGGACCTCTCCTCCTCGTTCAGTTGCACTTCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR TCA 90 bp CAACCAGATAAATCTGAGACCGAACAAAAACACAGAGTGCTTTCTCATGTGGCTCAGCTAGATTGTGCTTaGGGCTCCCCCTGCCCCATT +
Preference number: 4 (lower is better)
Translates to: QPDKSETEQKHRVLSHVAQLDCA*GSPCPI
Trigger: AATGGGGCAGGGGGAGCCTCAAGCACAATCTAGCTG...AGCCACATGAGAAAGCACTCTGTGTTTTTGTTCGGTCTCAGATTTATCTGGTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR TCA 90 bp AACAGGGCTTCAGCTACAGCATATCTAACACACAAACGGACCATGAGCTCCATTGCTCTCTGCACCATGTaGAAGGAGAAGGACCTCTAC +
Preference number: 4 (lower is better)
Translates to: NRASATAYLTHKRTMSSIALCTM*KEKDLY
Trigger: GTAGAGGTCCTTCTCCTTTCACATGGTGCAGAGAGC...AATGGAGCTCATGGTCCGTTTGTGTGTTAGATATGCTGTAGCTGAAGCCCTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR TCA 90 bp ACATCCCAGGGTTCAAATGTGAACATGCTCCTTCTTCTCCCCAGCACTATCTTCCCCAGGGTTCAAATGTaGACATGCTCCTTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: TSQGSNVNMLLLLPSTIFPRVQM*TCSFFS
Trigger: GGAGAAGAAGGAGCATGTTCACATTTGAACCCTGGG...GAAGATAGTGCTGGGGAGAAGAAGGAGCATGTTCACATTTGAACCCTGGGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456489.1
CDS-3UTR GCA 90 bp ATCAGTCACTGGTTTCACTGGAGCGGGAACCTCATTTTCTGGGATTTTCTCTGCCTTTGGCAATGTGGCTaGAGGATGAGCAAATGCAGG +
Preference number: 4 (lower is better)
Translates to: ISHWFHWSGNLIFWDFLCLWQCG*RMSKCR
Trigger: CCTGCATTTGCTCATCCTGCAGCCACATTGCCAAAG...GCAGAGAAAATCCCAGAAAATGAGGTTCCCGCTCCAGTGAAACCAGTGACTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379960.9
CDS-3UTR GCA 90 bp CTGCACCATGTGAAAGGAGAAGGACCTCTACACGACCACCAGCACAGCCTCCCGTGTGGTAAACTTGACTaGATAAGAATAGTTCTTGCT +
Preference number: 4 (lower is better)
Translates to: LHHVKGEGPLHDHQHSLPCGKLD*IRIVLA
Trigger: AGCAAGAACTATTCTTATGCAGTCAAGTTTACCACA...CGGGAGGCTGTGCTGGTGGTCGTGTAGAGGTCCTTCTCCTTTCACATGGTGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR GCA 90 bp CACCATGTGAAAGGAGAAGGACCTCTACACGACCACCAGCACAGCCTCCCGACACAGGATAAATTCCTCTaGTGTAAGTTTTCCATCTTG +
Preference number: 4 (lower is better)
Translates to: HHVKGEGPLHDHQHSLPTQDKFL*CKFSIL
Trigger: CAAGATGGAAAACTTACAGCAGAGGAATTTATCCTG...TGTCGGGAGGCTGTGCTGGTGGTCGTGTAGAGGTCCTTCTCCTTTCACATGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR GCA 90 bp ACTGAAGTGCAACTGAACGAGGAGGAGAGGTCCTCGCTCTCTGCACCATGTGAAATCAATGAGGTGCATTaGCAGGATAAATTCCTCTGC +
Preference number: 4 (lower is better)
Translates to: TEVQLNEEERSSLSAPCEINEVH*QDKFLC
Trigger: GCAGAGGAATTTATCCTGGCAATGCACCTCATTGAT...TTCACATGGTGCAGAGAGCGAGGACCTCTCCTCCTCGTTCAGTTGCACTTCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR GCA 90 bp TGCAATATGATTAGAGCATCGTACAAGGTAATAGCTTTGCCATGGAAAGAACTATGGGCCAGGCGCTCCTaGTCCTTGCGCTGCTGTTCC +
Preference number: 4 (lower is better)
Translates to: CNMIRASYKVIALPWKELWARRS*SLRCCS
Trigger: GGAACAGCAGCGCAAGGAGCAGGAGCGCCTGGCCCA...TAGTTCTTTCCATGGCAAAGCTATTACCTTGTACGATGCTCTAATCATATTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR GCA 90 bp AGACTGTGGATATCGTTGATCGTAACGACCTCAGTGGTGTTGTCTACTGATTTTTGTCTTTTGCGCTCTTaGTCCTGGCGCTCACGCTCC +
Preference number: 4 (lower is better)
Translates to: RLWISLIVTTSVVLSTDFCLLRS*SWRSRS
Trigger: GGAGCGTGAGCGCCAGGAGCAAGAGCGCAAAAGACA...AAAATCAGTAGACAACACCACTGAGGTCGTTACGATCAACGATATCCACAGTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR GCA 90 bp TTGTTTCATGAAACAGGAAATTGTTTCGGGGCAGGGAGGATTGTCGAGAATGATTGTCTTTTGCGCTCTTaGTCCTGGCGCTCACGCTCC +
Preference number: 4 (lower is better)
Translates to: LFHETGNCFGAGRIVENDCLLRS*SWRSRS
Trigger: GGAGCGTGAGCGCCAGGAGCAAGAGCGCAAAAGACA...ATCATTCTCGACAATCCTCCCTGCCCCGAAACAATTTCCTGTTTCATGAAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR GCA 90 bp AACAGGGCTTCAGCTACAGCATATCTAACACACAAACGGACCATGAGCTCCATTCGTTCTAGCTCCCGCTaGTTTTCCAGTTGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: NRASATAYLTHKRTMSSIRSSSR*FSSCFS
Trigger: GGAGAAGCAACTGGAAAAGCAGCGGGAGCTAGAACG...AATGGAGCTCATGGTCCGTTTGTGTGTTAGATATGCTGTAGCTGAAGCCCTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR GCA 90 bp TGCCCATGCATCCCAGTTATCCGTTTCTGGTTTCTCATTCGTGCTGGTGGGCCACACTCAAGTTGTCGTTaGCTTTCAAGTTCCCGTTTT +
Preference number: 4 (lower is better)
Translates to: CPCIPVIRFWFLIRAGGPHSSCR*LSSSRF
Trigger: AAAACGGGAACTTGAAAGGCAACGACAACTTGAGTG...TGGCCCACCAGCACGAATGAGAAACCAGAAACGGATAACTGGGATGCATGGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379960.9
CDS-3UTR GCA 90 bp AAAAGGAATACAATTTCCAGACAGCATGTGTGGCCGTGGGCTGGGACCCTGCTGCACTCAAGTTGTCGTTaGCTTTCAAGTTCCCGTTTT +
Preference number: 4 (lower is better)
Translates to: KRNTISRQHVWPWAGTLLHSSCR*LSSSRF
Trigger: AAAACGGGAACTTGAAAGGCAACGACAACTTGAGTG...CAGCAGGGTCCCAGCCCACGGCCACACATGCTGTCTGGAAATTGTATTCCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR GCA 90 bp TGGAGCGGGAACCTCATTTTCTGGGATTTTCTCTGCATAGTTTGCAGGGAACCATGGTCTCGTAGGTGCTaGCGAGCTAGTTCTTTTGCT +
Preference number: 4 (lower is better)
Translates to: WSGNLIFWDFLCIVCREPWSRRC*RASSFA
Trigger: AGCAAAAGAACTAGCTCGGCAGCACCTACGAGACCA...TGGTTCCCTGCAAACTATGCAGAGAAAATCCCAGAAAATGAGGTTCCCGCTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000379960.9
CDS-3UTR GCA 90 bp CCAACTCAACCAGATAAATCTGAGACCGAACAAAAACACAGAGTGCTTTCTCATTGCTCGTCCTCCTGCTaGACATGCTCCAGCCACTGC +
Preference number: 4 (lower is better)
Translates to: PTQPDKSETEQKHRVLSHCSSSC*TCSSHC
Trigger: GCAGTGGCTGGAGCATGTGCAGCAGGAGGACGAGCA...ATGAGAAAGCACTCTGTGTTTTTGTTCGGTCTCAGATTTATCTGGTTGAGTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR GCA 90 bp ATTGTTTCGGGGCAGGGAGGATTGTCGAGAATGATTCCTAGGAGCTTTGAGGGGTTTCTCTGCATAGTTTaGAGGGAACCACCCTGTCTT +
Preference number: 4 (lower is better)
Translates to: IVSGQGGLSRMIPRSFEGFLCIV*REPPCL
Trigger: AAGACAGGGTGGTTCCCTGCAAACTATGCAGAGAAA...CCCCTCAAAGCTCCTAGGAATCATTCTCGACAATCCTCCCTGCCCCGAAACAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR GCA 90 bp AAGGCCAGTTTGGGGGCAGGGGCAGATGTTGAATCAGTCACTGGTTTCACTGGATTCTGGGATTTTCTCTaGATAGTTTGCAGGGAACCA +
Preference number: 4 (lower is better)
Translates to: KASLGAGADVESVTGFTGFWDFL*IVCREP
Trigger: TGGTTCCCTGCAAACTATGCAGAGAAAATCCCAGAA...TCCAGTGAAACCAGTGACTGATTCAACATCTGCCCCTGCCCCCAAACTGGCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000379960.9
ENST00000419241.1
CDS-3UTR GCA 90 bp AGACTGTGGATATCGTTGATCGTAACGACCTCAGTGGTGTTGTCTACTGATTTTGGGCTGGGCTGCCCATaGATCCCAGTTATCCGTTTC +
Preference number: 4 (lower is better)
Translates to: RLWISLIVTTSVVLSTDFGLGCP*IPVIRF
Trigger: GAAACGGATAACTGGGATGCATGGGCAGCCCAGCCC...AAAATCAGTAGACAACACCACTGAGGTCGTTACGATCAACGATATCCACAGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR GCA 90 bp GGGATTTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAGGAATTTTTCCCACGTGCTTaGAGCTCTCCTTCCCACCAT +
Preference number: 4 (lower is better)
Translates to: GISATLEAIMRPVVRTKEFFPRA*SSPSHH
Trigger: ATGGTGGGAAGGAGAGCTGCAAGCACGTGGGAAAAA...TTCCTTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAAATCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR GCA 90 bp TGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGGCCGTGGGCTGCACTGTGCAGAAATTTaGGCGGCCCCAAGCAATTGG +
Preference number: 4 (lower is better)
Translates to: WFLRKGIQFPDSMCGRGLHCAEI*AAPSNW
Trigger: CCAATTGCTTGGGGCCGCGCAAATTTCTGCACAGTG...CAGCCCACGGCCACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR GCA 90 bp GGAACGGACCAGGTACGCTTTCTCGCGCTTCTTTTTCTCAGTCTCTATGTAGAGCATACAGCTCCTTGTTaGTCTTGGCCTTGTAGAGCT +
Preference number: 4 (lower is better)
Translates to: GTDQVRFLALLFLSLYVEHTAPC*SWPCRA
Trigger: AGCTCTACAAGGCCAAGAGCAACAAGGAGCTGTATG...CTCTACATAGAGACTGAGAAAAAGAAGCGCGAGAAAGCGTACCTGGTCCGTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381285.8
CDS-3UTR GCA 90 bp GTTGACCAGCCAATTACTTCCTCCGTGTCAGGTCTAACCAGAAGAGGTCTGCATCATACAGCTCCTTGTTaGTCTTGGCCTTGTAGAGCT +
Preference number: 4 (lower is better)
Translates to: VDQPITSSVSGLTRRGLHHTAPC*SWPCRA
Trigger: AGCTCTACAAGGCCAAGAGCAACAAGGAGCTGTATG...ATGCAGACCTCTTCTGGTTAGACCTGACACGGAGGAAGTAATTGGCTGGTCAAC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR GCA 90 bp CAGGATTCAGCACATTCAAGCACAGAACAGGTCACCAGCAACGACTGCTGCTATAGGGTTTCAACTCGATaGCTTCAACCACGTTCACCA +
Preference number: 4 (lower is better)
Translates to: QDSAHSSTEQVTSNDCCYRVSTR*LQPRSP
Trigger: TGGTGAACGTGGTTGAAGGCATCGAGTTGAAACCCT...ATAGCAGCAGTCGTTGCTGGTGACCTGTTCTGTGCTTGAATGTGCTGAATCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000381318.8
CDS-3UTR GCA 90 bp AACTCGATGCCTTCAACCACGTTCACCATCAACCTTCCAATGCCTGTTGCCCTTAGGGTTTCAACTCGATaGCTTCAACCACGTTCACCA +
Preference number: 4 (lower is better)
Translates to: NSMPSTTFTINLPMPVALRVSTR*LQPRSP
Trigger: TGGTGAACGTGGTTGAAGGCATCGAGTTGAAACCCT...AAGGGCAACAGGCATTGGAAGGTTGATGGTGAACGTGGTTGAAGGCATCGAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000420666.1
CDS-3UTR GCA 90 bp TGTCCTACAACAATCAGGATTCAGCACATTCAAGCACAGAACAGGTCACCAGCAATGCAGAGGACTTCCTaGTCCAGGTCTCGGATGAAG +
Preference number: 4 (lower is better)
Translates to: CPTTIRIQHIQAQNRSPAMQRTS*SRSRMK
Trigger: CTTCATCCGAGACCTGGAGCAGGAAGTCCTCTGCAT...TGCTGGTGACCTGTTCTGTGCTTGAATGTGCTGAATCCTGATTGTTGTAGGACA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000381318.8
CDS-3UTR GCA 90 bp CTATGGGATTTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAATGCAGAGGACTTCCTaGTCCAGGTCTCGGATGAAG +
Preference number: 4 (lower is better)
Translates to: LWDFSDPRSHNETCSEDKMQRTS*SRSRMK
Trigger: CTTCATCCGAGACCTGGAGCAGGAAGTCCTCTGCAT...TTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAAATCCCATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR GCA 90 bp AGCTGCTGCGTCCCACCAACAAAAATTCCCTTCCACCTAAAATTCCAGAAGTCAGGCTCATCAAACAACTaGAGGTCCAAGCGGACCACA +
Preference number: 4 (lower is better)
Translates to: SCCVPPTKIPFHLKFQKSGSSNN*RSKRTT
Trigger: TGTGGTCCGCTTGGACCTGCAGTTGTTTGATGAGCC...TGACTTCTGGAATTTTAGGTGGAAGGGAATTTTTGTTGGTGGGACGCAGCAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR GCA 90 bp GTTTCTAAACTCACACCAAGGACTGGGCATTGTAGGCCAAGAAGTCTACTTGGGTTTTTCCAACATGGCTaGCAACCGAGACCCAGTGAC +
Preference number: 4 (lower is better)
Translates to: VSKLTPRTGHCRPRSLLGFFQHG*QPRPSD
Trigger: GTCACTGGGTCTCGGTTGGCAGCCATGTTGGAAAAA...CCCAAGTAGACTTCTTGGCCTACAATGCCCAGTCCTTGGTGTGAGTTTAGAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000381318.8
CDS-3UTR GCA 90 bp GCTTTGAGGGGCCTGTCTTTGCCATCCCATATCCCTGTGACTGAATACCAAATGGGAGCATCTCAAGGATaGTCAACAGAGTCACTTGAG +
Preference number: 4 (lower is better)
Translates to: ALRGLSLPSHIPVTEYQMGASQG*STESLE
Trigger: CTCAAGTGACTCTGTTGAGCATCCTTGAGATGCTCC...CATTTGGTATTCAGTCACAGGGATATGGGATGGCAAAGACAGGCCCCTCAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR GCA 90 bp CAGGATTCAGCACATTCAAGCACAGAACAGGTCACCAGCAACGACTGCTGCTATTGCCTTCTAGAGAACTaGTCTGTGAAGAAGGCTCAG +
Preference number: 4 (lower is better)
Translates to: QDSAHSSTEQVTSNDCCYCLLEN*SVKKAQ
Trigger: CTGAGCCTTCTTCACAGAGCAGTTCTCTAGAAGGCA...ATAGCAGCAGTCGTTGCTGGTGACCTGTTCTGTGCTTGAATGTGCTGAATCCTG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR GCA 90 bp GCTTTGAGGGGCCTGTCTTTGCCATCCCATATCCCTGTGACTGAATACCAAATGTTCAGCACCCCACGGTaGAAAAAGAAGGAGGTGTTA +
Preference number: 4 (lower is better)
Translates to: ALRGLSLPSHIPVTEYQMFSTPR*KKKEVL
Trigger: TAACACCTCCTTCTTTTTGCACCGTGGGGTGCTGAA...CATTTGGTATTCAGTCACAGGGATATGGGATGGCAAAGACAGGCCCCTCAAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR GCA 90 bp CAGCCAGAGGGCATCGTTCTAAGGAAGGAGAGTCAGGGCCTGTTTGGGGTTGGTACGCATTCTTACCACTaGCTAAAAAGAAACCTTAGT +
Preference number: 4 (lower is better)
Translates to: QPEGIVLRKESQGLFGVGTHSYH*LKRNLS
Trigger: ACTAAGGTTTCTTTTTAGGCAGTGGTAAGAATGCGT...ACCAACCCCAAACAGGCCCTGACTCTCCTTCCTTAGAACGATGCCCTCTGGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR GCA 90 bp GAAACTTCCATAGACCAGCTCTTCAAAGAGCTAAGCCAGGGCCTGATCAGACCGAAAAGGGGCTCCAGTTaGTGGTTGACAGCATTAAGA +
Preference number: 4 (lower is better)
Translates to: ETSIDQLFKELSQGLIRPKRGSS*WLTALR
Trigger: TCTTAATGCTGTCAACCAGCAACTGGAGCCCCTTTT...CGGTCTGATCAGGCCCTGGCTTAGCTCTTTGAAGAGCTGGTCTATGGAAGTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR GCA 90 bp ACATCCCAGGGTTCAAATGTGAACATGCTCCTTCTTCTCCCCAGCACTATCTTCCCAGCACTATCTTCCTaGAGGGGGCCATCATTTTTC +
Preference number: 4 (lower is better)
Translates to: TSQGSNVNMLLLLPSTIFPALSS*RGPSFF
Trigger: GAAAAATGATGGCCCCCTGCAGGAAGATAGTGCTGG...GAAGATAGTGCTGGGGAGAAGAAGGAGCATGTTCACATTTGAACCCTGGGATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000456489.1
CDS-3UTR CCA 90 bp GAAGGAACGGCTATAACGGTGCACATGCTGGAAACTTCCATAGACCAGCTCTTCTTTCCTCTACAGTTATaGCCCAGATATCCAGGCTGC +
Preference number: 4 (lower is better)
Translates to: EGTAITVHMLETSIDQLFFPLQL*PRYPGC
Trigger: GCAGCCTGGATATCTGGGCCATAACTGTAGAGGAAA...GAAGAGCTGGTCTATGGAAGTTTCCAGCATGTGCACCGTTATAGCCGTTCCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000381318.8
CDS-3UTR CCA 90 bp GTTCTTGTTCTTTCTGTTTCAGTCGTTCAGCCTCCATGGACTTTTGCTTCTGGAGGATCCCATTGGCACTaGAGCAACAGCTGTAAGCGG +
Preference number: 4 (lower is better)
Translates to: VLVLSVSVVQPPWTFASGGSHWH*SNSCKR
Trigger: CCGCTTACAGCTGTTGCTCCAGTGCCAATGGGATCC...TCCAGAAGCAAAAGTCCATGGAGGCTGAACGACTGAAACAGAAAGAACAAGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379960.9
CDS-3UTR CCA 90 bp TTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAGGAAAACACCCACTGGTGGGACACTaGCCACATCAAATGACTGTG +
Preference number: 4 (lower is better)
Translates to: FSDPRSHNETCSEDKGKHPLVGH*PHQMTV
Trigger: CACAGTCATTTGATGTGGCCAGTGTCCCACCAGTGG...GTGTTTTCCTTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CCA 90 bp CCTTCAACCACGTTCACCATCAACCTTCCAATGCCTGTTGCCCTTTGGGAACGGAGAATAGTTCTTGCTTaGGGACCTGTTAAGTGTCCA +
Preference number: 4 (lower is better)
Translates to: PSTTFTINLPMPVALWERRIVLA*GPVKCP
Trigger: TGGACACTTAACAGGTCCCCAAGCAAGAACTATTCT...CCGTTCCCAAAGGGCAACAGGCATTGGAAGGTTGATGGTGAACGTGGTTGAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381285.8
CDS-3UTR CCA 90 bp GATAAATCTGAGACCGAACAAAAACACAGAGTGCTTTCTCATGTGGCTACAAGGTGGAGGCAGGACAGGTaGCAGTGGTTGGCCAGACAT +
Preference number: 4 (lower is better)
Translates to: DKSETEQKHRVLSHVATRWRQDR*QWLARH
Trigger: ATGTCTGGCCAACCACTGCCACCTGTCCTGCCTCCA...CCTTGTAGCCACATGAGAAAGCACTCTGTGTTTTTGTTCGGTCTCAGATTTATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CCA 90 bp CAACCAGATAAATCTGAGACCGAACAAAAACACAGAGTGCTTTCTCATGTGGCTTGGAGGCAGGACAGGTaGCAGTGGTTGGCCAGACAT +
Preference number: 4 (lower is better)
Translates to: QPDKSETEQKHRVLSHVAWRQDR*QWLARH
Trigger: ATGTCTGGCCAACCACTGCCACCTGTCCTGCCTCCA...AGCCACATGAGAAAGCACTCTGTGTTTTTGTTCGGTCTCAGATTTATCTGGTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CCA 90 bp CTGTTGCCCTTTGGGAACGGACCAGGTACGCTTTCTCGCGCTTCTTTTTCTCAGTCAATTTCTTGCCTTTaGGTGGTCAATCGACATCTG +
Preference number: 4 (lower is better)
Translates to: LLPFGNGPGTLSRASFSQSISCL*VVNRHL
Trigger: CAGATGTCGATTGACCACCCAAAGGCAAGAAATTGA...CTGAGAAAAAGAAGCGCGAGAAAGCGTACCTGGTCCGTTCCCAAAGGGCAACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381285.8
CDS-3UTR CCA 90 bp GAAACGACCGGCTTGGCTGCTGGAGAGGCTACTCGCTTTAGACTAGCAGGACTCATGGACTTTTGCTTCTaGAGTTGTTGCTTATTGTGT +
Preference number: 4 (lower is better)
Translates to: ETTGLAAGEATRFRLAGLMDFCF*SCCLLC
Trigger: ACACAATAAGCAACAACTCCAGAAGCAAAAGTCCAT...GAGTCCTGCTAGTCTAAAGCGAGTAGCCTCTCCAGCAGCCAAGCCGGTCGTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379960.9
CDS-3UTR CCA 90 bp GTTCAGCCTCCATGGACTTTTGCTTCTGGAGTTGTTGCTTATTGTGTATTTCTCGGGTGCCTGGACAGCTaGCTTAGCTGGTTCTTGGTG +
Preference number: 4 (lower is better)
Translates to: VQPPWTFASGVVAYCVFLGCLDS*LSWFLV
Trigger: CACCAAGAACCAGCTAAGCCAGCTGTCCAGGCACCC...GAGAAATACACAATAAGCAACAACTCCAGAAGCAAAAGTCCATGGAGGCTGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379960.9
CDS-3UTR CCA 90 bp GATAAATCTGAGACCGAACAAAAACACAGAGTGCTTTCTCATGTGGCTACAAGGGGGTGCCTGGACAGCTaGCTTAGCTGGTTCTTGGTG +
Preference number: 4 (lower is better)
Translates to: DKSETEQKHRVLSHVATRGCLDS*LSWFLV
Trigger: CACCAAGAACCAGCTAAGCCAGCTGTCCAGGCACCC...CCTTGTAGCCACATGAGAAAGCACTCTGTGTTTTTGTTCGGTCTCAGATTTATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CCA 90 bp ACTGAAGTGCAACTGAACGAGGAGGAGAGGTCCTCGCTCTCTGCACCATGTGAATGCAGAAATGGTAAGTaGACCTTTTTCTGCAGTGGA +
Preference number: 4 (lower is better)
Translates to: TEVQLNEEERSSLSAPCECRNGK*TFFCSG
Trigger: TCCACTGCAGAAAAAGGTCCACTTACCATTTCTGCA...TTCACATGGTGCAGAGAGCGAGGACCTCTCCTCCTCGTTCAGTTGCACTTCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CCA 90 bp AAAAGGAATACAATTTCCAGACAGCATGTGTGGCCGTGGGCTGGGACCCTGCTGTGCAGAAATGGTAAGTaGACCTTTTTCTGCAGTGGA +
Preference number: 4 (lower is better)
Translates to: KRNTISRQHVWPWAGTLLCRNGK*TFFCSG
Trigger: TCCACTGCAGAAAAAGGTCCACTTACCATTTCTGCA...CAGCAGGGTCCCAGCCCACGGCCACACATGCTGTCTGGAAATTGTATTCCTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CCA 90 bp ACTGAAGTGCAACTGAACGAGGAGGAGAGGTCCTCGCTCTCTGCACCATGTGAAACTATGTCTCCTGGCTaGATAGTGATTTCATCATGG +
Preference number: 4 (lower is better)
Translates to: TEVQLNEEERSSLSAPCETMSPG*IVISSW
Trigger: CCATGATGAAATCACTATCCAGCCAGGAGACATAGT...TTCACATGGTGCAGAGAGCGAGGACCTCTCCTCCTCGTTCAGTTGCACTTCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CCA 90 bp GTTTCACTGGAGCGGGAACCTCATTTTCTGGGATTTTCTCTGCATAGTTTGCAGCCGGGTTCTCCAGTTTaGCTTTCATCCACCCATTCC +
Preference number: 4 (lower is better)
Translates to: VSLEREPHFLGFSLHSLQPGSPV*LSSTHS
Trigger: GGAATGGGTGGATGAAAGCCAAACTGGAGAACCCGG...CTGCAAACTATGCAGAGAAAATCCCAGAAAATGAGGTTCCCGCTCCAGTGAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419241.1
CDS-3UTR CCA 90 bp CTGCCCATGCATCCCAGTTATCCGTTTCTGGTTTCTCATTCGTGCTGGTGGGCCGGGAACCTCATTTTCTaGGATTTTCTCTGCATAGTT +
Preference number: 4 (lower is better)
Translates to: LPMHPSYPFLVSHSCWWAGNLIF*DFLCIV
Trigger: AACTATGCAGAGAAAATCCCAGAAAATGAGGTTCCC...GGCCCACCAGCACGAATGAGAAACCAGAAACGGATAACTGGGATGCATGGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379960.9
ENST00000419241.1
CDS-3UTR CCA 90 bp CCAACTCAACCAGATAAATCTGAGACCGAACAAAAACACAGAGTGCTTTCTCATCACGCAAGGCCAGTTTaGGGGCAGGGGCAGATGTTG +
Preference number: 4 (lower is better)
Translates to: PTQPDKSETEQKHRVLSHHARPV*GQGQML
Trigger: CAACATCTGCCCCTGCCCCCAAACTGGCCTTGCGTG...ATGAGAAAGCACTCTGTGTTTTTGTTCGGTCTCAGATTTATCTGGTTGAGTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CCA 90 bp GATAAATCTGAGACCGAACAAAAACACAGAGTGCTTTCTCATGTGGCTACAAGGGACCTCTGCCTTAACTaGCCGGCACTTGGAACGGTG +
Preference number: 4 (lower is better)
Translates to: DKSETEQKHRVLSHVATRDLCLN*PALGTV
Trigger: CACCGTTCCAAGTGCCGGCCAGTTAAGGCAGAGGTC...CCTTGTAGCCACATGAGAAAGCACTCTGTGTTTTTGTTCGGTCTCAGATTTATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CCA 90 bp CAACCAGATAAATCTGAGACCGAACAAAAACACAGAGTGCTTTCTCATGTGGCTGACCTCTGCCTTAACTaGCCGGCACTTGGAACGGTG +
Preference number: 4 (lower is better)
Translates to: QPDKSETEQKHRVLSHVADLCLN*PALGTV
Trigger: CACCGTTCCAAGTGCCGGCCAGTTAAGGCAGAGGTC...AGCCACATGAGAAAGCACTCTGTGTTTTTGTTCGGTCTCAGATTTATCTGGTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CCA 90 bp CAGGATTCAGCACATTCAAGCACAGAACAGGTCACCAGCAACGACTGCTGCTATGTTTCACGTAAGACTTaGGGAACCAACCCTTCTGAC +
Preference number: 4 (lower is better)
Translates to: QDSAHSSTEQVTSNDCCYVSRKT*GTNPSD
Trigger: GTCAGAAGGGTTGGTTCCCCAAGTCTTACGTGAAAC...ATAGCAGCAGTCGTTGCTGGTGACCTGTTCTGTGCTTGAATGTGCTGAATCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CCA 90 bp TGTCCTACAACAATCAGGATTCAGCACATTCAAGCACAGAACAGGTCACCAGCAGAACTCCTTGAAGTCTaGGGCCTCATCCGTCTTCTG +
Preference number: 4 (lower is better)
Translates to: CPTTIRIQHIQAQNRSPAELLEV*GLIRLL
Trigger: CAGAAGACGGATGAGGCCCCAGACTTCAAGGAGTTC...TGCTGGTGACCTGTTCTGTGCTTGAATGTGCTGAATCCTGATTGTTGTAGGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000381318.8
CDS-3UTR CCA 90 bp GTTTCTAAACTCACACCAAGGACTGGGCATTGTAGGCCAAGAAGTCTACTTGGGGAGATTTTTCCAACATaGCTGCCAACCGAGACCCAG +
Preference number: 4 (lower is better)
Translates to: VSKLTPRTGHCRPRSLLGEIFPT*LPTETQ
Trigger: CTGGGTCTCGGTTGGCAGCCATGTTGGAAAAATCTC...CCCAAGTAGACTTCTTGGCCTACAATGCCCAGTCCTTGGTGTGAGTTTAGAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000381318.8
CDS-3UTR CCA 90 bp GCTTTGAGGGGCCTGTCTTTGCCATCCCATATCCCTGTGACTGAATACCAAATGAACAGAGAGGCCCAATaGTTTGAGACTCCATGCATC +
Preference number: 4 (lower is better)
Translates to: ALRGLSLPSHIPVTEYQMNREAQ*FETPCI
Trigger: GATGCATGGAGTCTCAAACCATTGGGCCTCTCTGTT...CATTTGGTATTCAGTCACAGGGATATGGGATGGCAAAGACAGGCCCCTCAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CCA 90 bp GTTTCTAAACTCACACCAAGGACTGGGCATTGTAGGCCAAGAAGTCTACTTGGGGATGCCGGGATGCAGTaGCCTAGAGAACTCCTATAT +
Preference number: 4 (lower is better)
Translates to: VSKLTPRTGHCRPRSLLGDAGMQ*PRELLY
Trigger: ATATAGGAGTTCTCTAGGCCACTGCATCCCGGCATC...CCCAAGTAGACTTCTTGGCCTACAATGCCCAGTCCTTGGTGTGAGTTTAGAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CCA 90 bp CCAAATGGTGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGGCCCCCAGAATACTCCCCTaGAGGACACCTGGGCTTTGG +
Preference number: 4 (lower is better)
Translates to: PNGGFLEKEYNFQTACVAPRILP*RTPGLW
Trigger: CCAAAGCCCAGGTGTCCTCCAGGGGAGTATTCTGGG...GGCCACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCACCATTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CCA 90 bp ACGCTATTAATGAAATGCCCCTGGAGAACACTTGCAGAACTTCCCGTAGTCCGGGTTCTGTGTGGTCAGTaGCTTTACACTTGTCCTAGC +
Preference number: 4 (lower is better)
Translates to: TLLMKCPWRTLAELPVVRVLCGQ*LYTCPS
Trigger: GCTAGGACAAGTGTAAAGCCACTGACCACACAGAAC...CCGGACTACGGGAAGTTCTGCAAGTGTTCTCCAGGGGCATTTCATTAATAGCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CCA 90 bp AAAAGGAATACAATTTCCAGACAGCATGTGTGGCCGTGGGCTGGGACCCTGCTGCTGTCTAGTGTGTCTTaGTGTCTGGGTTTTAATGCT +
Preference number: 4 (lower is better)
Translates to: KRNTISRQHVWPWAGTLLLSSVS*CLGFNA
Trigger: AGCATTAAAACCCAGACACCAAGACACACTAGACAG...CAGCAGGGTCCCAGCCCACGGCCACACATGCTGTCTGGAAATTGTATTCCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CCA 90 bp TTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAGGAAAACACAAGGCATCTTCCCCCTaGGGTCTCCATGGAAACATG +
Preference number: 4 (lower is better)
Translates to: FSDPRSHNETCSEDKGKHKASSP*GLHGNM
Trigger: CATGTTTCCATGGAGACCCCAGGGGGAAGATGCCTT...GTGTTTTCCTTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CCA 90 bp ACAGAATCCTCCTTAGGTGGCCTAAGGGGCACTTCTGGTGGCCAAGTACAGAAACAGTTATGGACCACATaGACAGTGCCTCTAAGTGAT +
Preference number: 4 (lower is better)
Translates to: TESSLGGLRGTSGGQVQKQLWTT*TVPLSD
Trigger: ATCACTTAGAGGCACTGTCCATGTGGTCCATAACTG...TTTCTGTACTTGGCCACCAGAAGTGCCCCTTAGGCCACCTAAGGAGGATTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CCA 90 bp TCTTTCCATGTGACCGACAGGGTTTCAACTCGATGCCTTCAACCACGTTCACCACACAGCTGCAAATGCTaGTGCGCTAGAAATAGCAAC +
Preference number: 4 (lower is better)
Translates to: SFHVTDRVSTRCLQPRSPHSCKC*CARNSN
Trigger: GTTGCTATTTCTAGCGCACCAGCATTTGCAGCTGTG...TGGTGAACGTGGTTGAAGGCATCGAGTTGAAACCCTGTCGGTCACATGGAAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381285.8
CDS-3UTR CCA 90 bp CATTGTAATTACCATTTATTGTACATCTACATGCACTGCCCCATGAGATTACAGGCCGAGGGCGCAGCATaGGCAAAAGCCTCGAGGTGG +
Preference number: 4 (lower is better)
Translates to: HCNYHLLYIYMHCPMRLQAEGAA*AKASRW
Trigger: CCACCTCGAGGCTTTTGCCCATGCTGCGCCCTCGGC...CTGTAATCTCATGGGGCAGTGCATGTAGATGTACAATAAATGGTAATTACAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440794.2
3UTR CAA 72 bp GGTCCGAGGGCCAGCCCGACTCCTCCATACGGACAATaGGTTACATTACAAATTACACCAGTAAATACAAGG +
Preference number: 4 (lower is better)
Translates to: GPRASPTPPYGQ*VTLQITPVNTR
Trigger: CCTTGTATTTACTGGTGTAATTTGTAATGTAACCAATTGTCCGTATGGAGGAGTCGGGCTGGCCCTCGGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR TCA 90 bp AGCACAGAACAGGTCACCAGCAACGACTGCTGCTATGAAATATCACAGGCCTCCAAAGGTGTTGGAAACTaGGCCATGGTTCTGTTACTT +
Preference number: 4 (lower is better)
Translates to: STEQVTSNDCCYEISQASKGVGN*AMVLLL
Trigger: AAGTAACAGAACCATGGCTCAGTTTCCAACACCTTT...GGAGGCCTGTGATATTTCATAGCAGCAGTCGTTGCTGGTGACCTGTTCTGTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000381318.8
CDS-3UTR TCA 90 bp CGTAACTGGACCTTTGGAGCCCTGGTCTTTCTTGATGTCCGCCACACGGATCTCATGGAAAACTCCACTTaGTCCATTCTTCCATCATTA +
Preference number: 4 (lower is better)
Translates to: RNWTFGALVFLDVRHTDLMENST*SILPSL
Trigger: TAATGATGGAAGAATGGATCAAGTGGAGTTTTCCAT...GAGATCCGTGTGGCGGACATCAAGAAAGACCAGGGCTCCAAAGGTCCAGTTACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381285.8
CDS-3UTR TCA 90 bp GGTGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGGCCGTGGGCCATATTGAAGCCAGCTaGGCCTGTGGTAAACTTGAC +
Preference number: 4 (lower is better)
Translates to: GGFLEKEYNFQTACVAVGHIEAS*ACGKLD
Trigger: GTCAAGTTTACCACAGGCTCAGCTGGCTTCAATATG...GCCCACGGCCACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR TCA 90 bp ACTGAAGTGCAACTGAACGAGGAGGAGAGGTCCTCGCTCTCTGCACCATGTGAACTGATCTACAGATGTTaGGCTTATGACAGATATACC +
Preference number: 4 (lower is better)
Translates to: TEVQLNEEERSSLSAPCELIYRC*AYDRYT
Trigger: GGTATATCTGTCATAAGCTCAACATCTGTAGATCAG...TTCACATGGTGCAGAGAGCGAGGACCTCTCCTCCTCGTTCAGTTGCACTTCAGT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR TCA 90 bp GGTGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGGCCGTGGGCTCCTCTGGTAGCCTCTaGTCTACAGATGTTGAGCTT +
Preference number: 4 (lower is better)
Translates to: GGFLEKEYNFQTACVAVGSSGSL*STDVEL
Trigger: AAGCTCAACATCTGTAGATCAGAGGCTACCAGAGGA...GCCCACGGCCACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR TCA 90 bp ACTGAAGTGCAACTGAACGAGGAGGAGAGGTCCTCGCTCTCTGCACCATGTGAATGGTCAATCGACATCTaGTATCTTGAAGTTTCCCTT +
Preference number: 4 (lower is better)
Translates to: TEVQLNEEERSSLSAPCEWSIDI*YLEVSL
Trigger: AAGGGAAACTTCAAGATATCAGATGTCGATTGACCA...TTCACATGGTGCAGAGAGCGAGGACCTCTCCTCCTCGTTCAGTTGCACTTCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR TCA 90 bp ATTGTTTCGGGGCAGGGAGGATTGTCGAGAATGATTCCTAGGAGCTTTGAGGGGCTTCCAAGCATTTGCTaGGATTCCTGTAATTGTTGC +
Preference number: 4 (lower is better)
Translates to: IVSGQGGLSRMIPRSFEGLPSIC*DSCNCC
Trigger: GCAACAATTACAGGAATCTCAGCAAATGCTTGGAAG...CCCCTCAAAGCTCCTAGGAATCATTCTCGACAATCCTCCCTGCCCCGAAACAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR TCA 90 bp TTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAGGAAAACACGTTCAGAAGCAGCTTTaGTTTTCTGCACCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: FSDPRSHNETCSEDKGKHVQKQL*FSAPRQ
Trigger: CTGCCTGGGTGCAGAAAATCAAAGCTGCTTCTGAAC...GTGTTTTCCTTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR TCA 90 bp CTATGGGATTTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAGTTGCTCTTTCCATGTaGCCGACAGGGTTTCAACTC +
Preference number: 4 (lower is better)
Translates to: LWDFSDPRSHNETCSEDKVALSM*PTGFQL
Trigger: GAGTTGAAACCCTGTCGGTCACATGGAAAGAGCAAC...TTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAAATCCCATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR TCA 90 bp TGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGGCCGTGGGCTGCCAACCGAGACCCAGTaGCCCAACATTGTAAAGTTG +
Preference number: 4 (lower is better)
Translates to: WFLRKGIQFPDSMCGRGLPTETQ*PNIVKL
Trigger: CAACTTTACAATGTTGGGTCACTGGGTCTCGGTTGG...CAGCCCACGGCCACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000381318.8
CDS-3UTR TCA 90 bp CTTCTAGAACTTGAGGCTACTTACACAGAGGGATCTTTTCTCTCCTACCATCCCAACAAGCATATTATGTaGGGTTGGGGTGGTGGAGGG +
Preference number: 4 (lower is better)
Translates to: LLELEATYTEGSFLSYHPNKHIM*GWGGGG
Trigger: CCCTCCACCACCCCAACCTCACATAATATGCTTGTT...GGGATGGTAGGAGAGAAAAGATCCCTCTGTGTAAGTAGCCTCAAGTTCTAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR TCA 90 bp GGTGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGGCCGTGGGCAAGAGATCGGAATGGTaGCCCACACTACCCCATTTA +
Preference number: 4 (lower is better)
Translates to: GGFLEKEYNFQTACVAVGKRSEW*PTLPHL
Trigger: TAAATGGGGTAGTGTGGGTCACCATTCCGATCTCTT...GCCCACGGCCACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR TCA 90 bp CTATGGGATTTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAATACGATATCACCTCATaGGTGCAGCCTGACGGACAA +
Preference number: 4 (lower is better)
Translates to: LWDFSDPRSHNETCSEDKYDITS*VQPDGQ
Trigger: TTGTCCGTCAGGCTGCACTCATGAGGTGATATCGTA...TTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAAATCCCATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR TCA 90 bp GTTTCTAAACTCACACCAAGGACTGGGCATTGTAGGCCAAGAAGTCTACTTGGGGTCCGGAAGATTGCATaGCGCATGAAAACAAAGCCA +
Preference number: 4 (lower is better)
Translates to: VSKLTPRTGHCRPRSLLGVRKIA*RMKTKP
Trigger: TGGCTTTGTTTTCATGCGTCATGCAATCTTCCGGAC...CCCAAGTAGACTTCTTGGCCTACAATGCCCAGTCCTTGGTGTGAGTTTAGAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR TCA 90 bp GAAGGAACGGCTATAACGGTGCACATGCTGGAAACTTCCATAGACCAGCTCTTCAACCGGAAACTGAGCTaGTTATCATCCACAGGACAT +
Preference number: 4 (lower is better)
Translates to: EGTAITVHMLETSIDQLFNRKLS*LSSTGH
Trigger: ATGTCCTGTGGATGATAATCAGCTCAGTTTCCGGTT...GAAGAGCTGGTCTATGGAAGTTTCCAGCATGTGCACCGTTATAGCCGTTCCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR TCA 90 bp AACAGGGCTTCAGCTACAGCATATCTAACACACAAACGGACCATGAGCTCCATTATACTGAAGTGCAACTaGACGAGGAGGAGAGGTCCT +
Preference number: 4 (lower is better)
Translates to: NRASATAYLTHKRTMSSIILKCN*TRRRGP
Trigger: AGGACCTCTCCTCCTCGTTCAGTTGCACTTCAGTAT...AATGGAGCTCATGGTCCGTTTGTGTGTTAGATATGCTGTAGCTGAAGCCCTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR GCA 90 bp GAAGGAACGGCTATAACGGTGCACATGCTGGAAACTTCCATAGACCAGCTCTTCGAAATAGCAACTGGTTaGTGTTTCATGACAGGGGGA +
Preference number: 4 (lower is better)
Translates to: EGTAITVHMLETSIDQLFEIATG*CFMTGG
Trigger: TCCCCCTGTCATGAAACAGCAACCAGTTGCTATTTC...GAAGAGCTGGTCTATGGAAGTTTCCAGCATGTGCACCGTTATAGCCGTTCCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000381318.8
CDS-3UTR GCA 90 bp GTTTCTAAACTCACACCAAGGACTGGGCATTGTAGGCCAAGAAGTCTACTTGGGACCTCCCATACCAAATaGTGGTGCGCTAGAAATAGC +
Preference number: 4 (lower is better)
Translates to: VSKLTPRTGHCRPRSLLGTSHTK*WCARNS
Trigger: GCTATTTCTAGCGCACCAGCATTTGGTATGGGAGGT...CCCAAGTAGACTTCTTGGCCTACAATGCCCAGTCCTTGGTGTGAGTTTAGAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR GCA 90 bp GGGATTTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAGGAAACCTCCCATACCAAATaGTGGTGCGCTAGAAATAGC +
Preference number: 4 (lower is better)
Translates to: GISATLEAIMRPVVRTKETSHTK*WCARNS
Trigger: GCTATTTCTAGCGCACCAGCATTTGGTATGGGAGGT...TTCCTTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAAATCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381318.8
ENST00000399367.7
CDS-3UTR GCA 90 bp TATGGGATTTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAGCTTTGGCAATGTGGCTaGAGGATGAGCAAATGCAGG +
Preference number: 4 (lower is better)
Translates to: YGISATLEAIMRPVVRTKLWQCG*RMSKCR
Trigger: CCTGCATTTGCTCATCCTGCAGCCACATTGCCAAAG...CTTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAAATCCCATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR GCA 90 bp AACAGGGCTTCAGCTACAGCATATCTAACACACAAACGGACCATGAGCTCCATTTGTTCCAGGAGAGCTTaGCTTCGTTTCTCCAGTTCC +
Preference number: 4 (lower is better)
Translates to: NRASATAYLTHKRTMSSICSRRA*LRFSSS
Trigger: GGAACTGGAGAAACGAAGGCAAGCTCTCCTGGAACA...AATGGAGCTCATGGTCCGTTTGTGTGTTAGATATGCTGTAGCTGAAGCCCTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR GCA 90 bp CCAACTCAACCAGATAAATCTGAGACCGAACAAAAACACAGAGTGCTTTCTCATTCCTGCTCCTTGCGCTaGTGTTCCAGGAGAGCTTGC +
Preference number: 4 (lower is better)
Translates to: PTQPDKSETEQKHRVLSHSCSLR*CSRRAC
Trigger: GCAAGCTCTCCTGGAACAGCAGCGCAAGGAGCAGGA...ATGAGAAAGCACTCTGTGTTTTTGTTCGGTCTCAGATTTATCTGGTTGAGTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR GCA 90 bp TTTATTGAGAGCTTCCAACTAGTGTTTAAAAGACAAACAGGGCTTCAGCTACAGCTCTCCTCCTCTCTCTaGCGTTCTAGCTCCCGCTGC +
Preference number: 4 (lower is better)
Translates to: FIESFQLVFKRQTGLQLQLSSSL*RSSSRC
Trigger: GCAGCGGGAGCTAGAACGGCAGAGAGAGGAGGAGAG...CTGTAGCTGAAGCCCTGTTTGTCTTTTAAACACTAGTTGGAAGCTCTCAATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR GCA 90 bp TGTCCTACAACAATCAGGATTCAGCACATTCAAGCACAGAACAGGTCACCAGCATGGTCTCGTAGGTGCTaGCGAGCTAGTTCTTTTGCT +
Preference number: 4 (lower is better)
Translates to: CPTTIRIQHIQAQNRSPAWSRRC*RASSFA
Trigger: AGCAAAAGAACTAGCTCGGCAGCACCTACGAGACCA...TGCTGGTGACCTGTTCTGTGCTTGAATGTGCTGAATCCTGATTGTTGTAGGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000381318.8
CDS-3UTR GCA 90 bp AACAGGGCTTCAGCTACAGCATATCTAACACACAAACGGACCATGAGCTCCATTTGGTCTCGTAGGTGCTaGCGAGCTAGTTCTTTTGCT +
Preference number: 4 (lower is better)
Translates to: NRASATAYLTHKRTMSSIWSRRC*RASSFA
Trigger: AGCAAAAGAACTAGCTCGGCAGCACCTACGAGACCA...AATGGAGCTCATGGTCCGTTTGTGTGTTAGATATGCTGTAGCTGAAGCCCTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR GCA 90 bp CACCATGTGAAAGGAGAAGGACCTCTACACGACCACCAGCACAGCCTCCCGACATGCTTCTGGAGTTGTTaGTTATTGTGTATTTCTCTT +
Preference number: 4 (lower is better)
Translates to: HHVKGEGPLHDHQHSLPTCFWSC*LLCISL
Trigger: AAGAGAAATACACAATAAGCAACAACTCCAGAAGCA...TGTCGGGAGGCTGTGCTGGTGGTCGTGTAGAGGTCCTTCTCCTTTCACATGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR GCA 90 bp GCTTTGAGGGGCCTGTCTTTGCCATCCCATATCCCTGTGACTGAATACCAAATGGCCTCCATGGACTTTTaGTTCTGGAGTTGTTGCTTA +
Preference number: 4 (lower is better)
Translates to: ALRGLSLPSHIPVTEYQMASMDF*FWSCCL
Trigger: TAAGCAACAACTCCAGAAGCAAAAGTCCATGGAGGC...CATTTGGTATTCAGTCACAGGGATATGGGATGGCAAAGACAGGCCCCTCAAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR GCA 90 bp CCAACTCAACCAGATAAATCTGAGACCGAACAAAAACACAGAGTGCTTTCTCATCTGGTTTCTCATTCGTaGTGGTGGGCCACGTGGAGC +
Preference number: 4 (lower is better)
Translates to: PTQPDKSETEQKHRVLSHLVSHS*WWATWS
Trigger: GCTCCACGTGGCCCACCAGCACGAATGAGAAACCAG...ATGAGAAAGCACTCTGTGTTTTTGTTCGGTCTCAGATTTATCTGGTTGAGTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR GCA 90 bp CCAAATGGTGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGGCCGTAAAGGCGGACCTCTaGCTTAACTGGCCGGCACTT +
Preference number: 4 (lower is better)
Translates to: PNGGFLEKEYNFQTACVAVKADL*LNWPAL
Trigger: AAGTGCCGGCCAGTTAAGGCAGAGGTCCGCCTTTAC...GGCCACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCACCATTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR GCA 90 bp AGACTGTGGATATCGTTGATCGTAACGACCTCAGTGGTGTTGTCTACTGATTTTGCGCTTTTTCCCACGTaGTTGCAGCTCTCCTTCCCA +
Preference number: 4 (lower is better)
Translates to: RLWISLIVTTSVVLSTDFALFPT*LQLSFP
Trigger: TGGGAAGGAGAGCTGCAAGCACGTGGGAAAAAGCGC...AAAATCAGTAGACAACACCACTGAGGTCGTTACGATCAACGATATCCACAGTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR GCA 90 bp GTTTCTAAACTCACACCAAGGACTGGGCATTGTAGGCCAAGAAGTCTACTTGGGAAGTCTGAACACCATTaGTGGCTTGGGTCCATGTCT +
Preference number: 4 (lower is better)
Translates to: VSKLTPRTGHCRPRSLLGKSEHH*WLGSMS
Trigger: AGACATGGACCCAAGCCAGCAATGGTGTTCAGACTT...CCCAAGTAGACTTCTTGGCCTACAATGCCCAGTCCTTGGTGTGAGTTTAGAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000381318.8
CDS-3UTR GCA 90 bp GGTGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGGCCGTGGGCAAGTCTGAACACCATTaGTGGCTTGGGTCCATGTCT +
Preference number: 4 (lower is better)
Translates to: GGFLEKEYNFQTACVAVGKSEHH*WLGSMS
Trigger: AGACATGGACCCAAGCCAGCAATGGTGTTCAGACTT...GCCCACGGCCACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR GCA 90 bp TGTTACCCGTTGCATAGGCTTCAGTATAAAACTAGAGAGTGGCATCCCTTTACACATGTGCGGCAGCTGTaGGCTCAGGATGTCTCCAAT +
Preference number: 4 (lower is better)
Translates to: CYPLHRLQYKTREWHPFTHVRQL*AQDVSN
Trigger: ATTGGAGACATCCTGAGCGCACAGCTGCCGCACATG...TGTAAAGGGATGCCACTCTCTAGTTTTATACTGAAGCCTATGCAACGGGTAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381285.8
CDS-3UTR GCA 90 bp ATTGTTTCGGGGCAGGGAGGATTGTCGAGAATGATTCCTAGGAGCTTTGAGGGGTTCATTTATGCTTTCTaGTCGGAGAGTATAGACGCG +
Preference number: 4 (lower is better)
Translates to: IVSGQGGLSRMIPRSFEGFIYAF*SESIDA
Trigger: CGCGTCTATACTCTCCGAGCAGAAAGCATAAATGAA...CCCCTCAAAGCTCCTAGGAATCATTCTCGACAATCCTCCCTGCCCCGAAACAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR GCA 90 bp GGGATTTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAGGAAGCAGCTTTGATTTTCTaGACCCAGGCAGTCCTTTCA +
Preference number: 4 (lower is better)
Translates to: GISATLEAIMRPVVRTKEAALIF*TQAVLS
Trigger: TGAAAGGACTGCCTGGGTGCAGAAAATCAAAGCTGC...TTCCTTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAAATCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR GCA 90 bp CTTCTAGAACTTGAGGCTACTTACACAGAGGGATCTTTTCTCTCCTACCATCCCCCATCAACCTTCCAATaGCTGTTGCCCTTTGGGAAC +
Preference number: 4 (lower is better)
Translates to: LLELEATYTEGSFLSYHPPSTFQ*LLPFGN
Trigger: GTTCCCAAAGGGCAACAGGCATTGGAAGGTTGATGG...GGGATGGTAGGAGAGAAAAGATCCCTCTGTGTAAGTAGCCTCAAGTTCTAGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR GCA 90 bp GGGATTTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAGGAAAGGGTTTCAACTCGATaGCTTCAACCACGTTCACCA +
Preference number: 4 (lower is better)
Translates to: GISATLEAIMRPVVRTKERVSTR*LQPRSP
Trigger: TGGTGAACGTGGTTGAAGGCATCGAGTTGAAACCCT...TTCCTTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAAATCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR GCA 90 bp TTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAGGAAAACACTTTTTCCAACATGGCTaGCAACCGAGACCCAGTGAC +
Preference number: 4 (lower is better)
Translates to: FSDPRSHNETCSEDKGKHFFQHG*QPRPSD
Trigger: GTCACTGGGTCTCGGTTGGCAGCCATGTTGGAAAAA...GTGTTTTCCTTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000381318.8
CDS-3UTR GCA 90 bp GGGATTTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAGGAAACCAGCAACGACTGCTaGTATGAAATATCACAGGCC +
Preference number: 4 (lower is better)
Translates to: GISATLEAIMRPVVRTKETSNDC*YEISQA
Trigger: GGCCTGTGATATTTCATAGCAGCAGTCGTTGCTGGT...TTCCTTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAAATCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000381318.8
CDS-3UTR GCA 90 bp GTTTCTAAACTCACACCAAGGACTGGGCATTGTAGGCCAAGAAGTCTACTTGGGACCAGCAACGACTGCTaGTATGAAATATCACAGGCC +
Preference number: 4 (lower is better)
Translates to: VSKLTPRTGHCRPRSLLGTSNDC*YEISQA
Trigger: GGCCTGTGATATTTCATAGCAGCAGTCGTTGCTGGT...CCCAAGTAGACTTCTTGGCCTACAATGCCCAGTCCTTGGTGTGAGTTTAGAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000381318.8
CDS-3UTR GCA 90 bp GGTGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGGCCGTGGGCCAGCTGTGGTTTCTTTaGACCCTCAGTCTTTCTGCT +
Preference number: 4 (lower is better)
Translates to: GGFLEKEYNFQTACVAVGQLWFL*TLSLSA
Trigger: AGCAGAAAGACTGAGGGTGCAAAGAAACCACAGCTG...GCCCACGGCCACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR GCA 90 bp ACAGAATCCTCCTTAGGTGGCCTAAGGGGCACTTCTGGTGGCCAAGTACAGAAATTGACAGCATTAAGATaGACGCAGCCTGTTCAAAGA +
Preference number: 4 (lower is better)
Translates to: TESSLGGLRGTSGGQVQKLTALR*TQPVQR
Trigger: TCTTTGAACAGGCTGCGTGCATCTTAATGCTGTCAA...TTTCTGTACTTGGCCACCAGAAGTGCCCCTTAGGCCACCTAAGGAGGATTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CCA 90 bp TTTATTGAGAGCTTCCAACTAGTGTTTAAAAGACAAACAGGGCTTCAGCTACAGCTACGCTCCCTCCCCTaGCGCCTCCACTCTTCTCTA +
Preference number: 4 (lower is better)
Translates to: FIESFQLVFKRQTGLQLQLRSLP*RLHSSL
Trigger: TAGAGAAGAGTGGAGGCGCCAGGGGAGGGAGCGTAG...CTGTAGCTGAAGCCCTGTTTGTCTTTTAAACACTAGTTGGAAGCTCTCAATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CCA 90 bp GGGATTTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAGGAAGCCACCAAAAGGTGTTaGAAACTGAGCCATGGTTCT +
Preference number: 4 (lower is better)
Translates to: GISATLEAIMRPVVRTKEATKRC*KLSHGS
Trigger: AGAACCATGGCTCAGTTTCCAACACCTTTTGGTGGC...TTCCTTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAAATCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CCA 90 bp AGACTGTGGATATCGTTGATCGTAACGACCTCAGTGGTGTTGTCTACTGATTTTAACAGCTGTAAGCGGTaGCATGCTGGCGATACCTCC +
Preference number: 4 (lower is better)
Translates to: RLWISLIVTTSVVLSTDFNSCKR*HAGDTS
Trigger: GGAGGTATCGCCAGCATGCCACCGCTTACAGCTGTT...AAAATCAGTAGACAACACCACTGAGGTCGTTACGATCAACGATATCCACAGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CCA 90 bp AGACTGTGGATATCGTTGATCGTAACGACCTCAGTGGTGTTGTCTACTGATTTTGGATCCCATTGGCACTaGAGCAACAGCTGTAAGCGG +
Preference number: 4 (lower is better)
Translates to: RLWISLIVTTSVVLSTDFGSHWH*SNSCKR
Trigger: CCGCTTACAGCTGTTGCTCCAGTGCCAATGGGATCC...AAAATCAGTAGACAACACCACTGAGGTCGTTACGATCAACGATATCCACAGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CCA 90 bp CAACCAGATAAATCTGAGACCGAACAAAAACACAGAGTGCTTTCTCATGTGGCTGGATCCCATTGGCACTaGAGCAACAGCTGTAAGCGG +
Preference number: 4 (lower is better)
Translates to: QPDKSETEQKHRVLSHVAGSHWH*SNSCKR
Trigger: CCGCTTACAGCTGTTGCTCCAGTGCCAATGGGATCC...AGCCACATGAGAAAGCACTCTGTGTTTTTGTTCGGTCTCAGATTTATCTGGTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CCA 90 bp GGGATTTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAGGAATTCCAACAACTGGAATaGATCCCATTGGCACTGGAG +
Preference number: 4 (lower is better)
Translates to: GISATLEAIMRPVVRTKEFQQLE*IPLALE
Trigger: CTCCAGTGCCAATGGGATCCATTCCAGTTGTTGGAA...TTCCTTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAAATCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CCA 90 bp GCTTTGAGGGGCCTGTCTTTGCCATCCCATATCCCTGTGACTGAATACCAAATGAGACATTCCAACAACTaGAATGGATCCCATTGGCAC +
Preference number: 4 (lower is better)
Translates to: ALRGLSLPSHIPVTEYQMRHSNN*NGSHWH
Trigger: GTGCCAATGGGATCCATTCCAGTTGTTGGAATGTCT...CATTTGGTATTCAGTCACAGGGATATGGGATGGCAAAGACAGGCCCCTCAAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CCA 90 bp GGTTCAAGATACACAGGAAGAGCAATTTGTACTGATGTTGCTACTGGTTTAAAGAGCCCACTCTGCCACTaGTGGGACACTGGCCACATC +
Preference number: 4 (lower is better)
Translates to: GSRYTGRAICTDVATGLKSPLCH*WDTGHI
Trigger: GATGTGGCCAGTGTCCCACCAGTGGCAGAGTGGGCT...CTTTAAACCAGTAGCAACATCAGTACAAATTGCTCTTCCTGTGTATCTTGAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CCA 90 bp TTTATTGAGAGCTTCCAACTAGTGTTTAAAAGACAAACAGGGCTTCAGCTACAGGTGGACCAGGGTGCCTaGACAGCTGGCTTAGCTGGT +
Preference number: 4 (lower is better)
Translates to: FIESFQLVFKRQTGLQLQVDQGA*TAGLAG
Trigger: ACCAGCTAAGCCAGCTGTCCAGGCACCCTGGTCCAC...CTGTAGCTGAAGCCCTGTTTGTCTTTTAAACACTAGTTGGAAGCTCTCAATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CCA 90 bp GATGCCTTCAACCACGTTCACCATCAACCTTCCAATGCCTGTTGCCCTTTGGGATGCAGAAATGGTAAGTaGACCTTTTTCTGCAGTGGA +
Preference number: 4 (lower is better)
Translates to: DAFNHVHHQPSNACCPLGCRNGK*TFFCSG
Trigger: TCCACTGCAGAAAAAGGTCCACTTACCATTTCTGCA...TCCCAAAGGGCAACAGGCATTGGAAGGTTGATGGTGAACGTGGTTGAAGGCATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381285.8
CDS-3UTR CCA 90 bp ATTGTTTCGGGGCAGGGAGGATTGTCGAGAATGATTCCTAGGAGCTTTGAGGGGTGCAGAAATGGTAAGTaGACCTTTTTCTGCAGTGGA +
Preference number: 4 (lower is better)
Translates to: IVSGQGGLSRMIPRSFEGCRNGK*TFFCSG
Trigger: TCCACTGCAGAAAAAGGTCCACTTACCATTTCTGCA...CCCCTCAAAGCTCCTAGGAATCATTCTCGACAATCCTCCCTGCCCCGAAACAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CCA 90 bp ACCTTCGCTTTAATTGGGCTCATTCTATACGTCTTTAAAACAGAGATACTGAACGCCAGTGGCCGTGGCTaGAGTAAAGGCGGACCTCTG +
Preference number: 4 (lower is better)
Translates to: TFALIGLILYVFKTEILNASGRG*SKGGPL
Trigger: CAGAGGTCCGCCTTTACTCCAGCCACGGCCACTGGC...GTTCAGTATCTCTGTTTTAAAGACGTATAGAATGAGCCCAATTAAAGCGAAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CCA 90 bp CATTGTAATTACCATTTATTGTACATCTACATGCACTGCCCCATGAGATTACAGGCCAGTGGCCGTGGCTaGAGTAAAGGCGGACCTCTG +
Preference number: 4 (lower is better)
Translates to: HCNYHLLYIYMHCPMRLQASGRG*SKGGPL
Trigger: CAGAGGTCCGCCTTTACTCCAGCCACGGCCACTGGC...CTGTAATCTCATGGGGCAGTGCATGTAGATGTACAATAAATGGTAATTACAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440794.2
CDS-3UTR CCA 90 bp GGTTCAAGATACACAGGAAGAGCAATTTGTACTGATGTTGCTACTGGTTTAAAGCCGAAACGACCGGCTTaGCTGCTGGAGAGGCTACTC +
Preference number: 4 (lower is better)
Translates to: GSRYTGRAICTDVATGLKPKRPA*LLERLL
Trigger: GAGTAGCCTCTCCAGCAGCCAAGCCGGTCGTTTCGG...CTTTAAACCAGTAGCAACATCAGTACAAATTGCTCTTCCTGTGTATCTTGAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CCA 90 bp TTTATTGAGAGCTTCCAACTAGTGTTTAAAAGACAAACAGGGCTTCAGCTACAGCCGAAACGACCGGCTTaGCTGCTGGAGAGGCTACTC +
Preference number: 4 (lower is better)
Translates to: FIESFQLVFKRQTGLQLQPKRPA*LLERLL
Trigger: GAGTAGCCTCTCCAGCAGCCAAGCCGGTCGTTTCGG...CTGTAGCTGAAGCCCTGTTTGTCTTTTAAACACTAGTTGGAAGCTCTCAATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CCA 90 bp CTTCAACCACGTTCACCATCAACCTTCCAATGCCTGTTGCCCTTTGGGAACGGATATAAAACTAGAGAGTaGCATCCCTTTACACCGAGG +
Preference number: 4 (lower is better)
Translates to: LQPRSPSTFQCLLPFGNGYKTRE*HPFTPR
Trigger: CCTCGGTGTAAAGGGATGCCACTCTCTAGTTTTATA...TCCGTTCCCAAAGGGCAACAGGCATTGGAAGGTTGATGGTGAACGTGGTTGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381285.8
CDS-3UTR CCA 90 bp TGTCCTACAACAATCAGGATTCAGCACATTCAAGCACAGAACAGGTCACCAGCATCATCTGGTGAGAACTaGTCCCTCTCGAACACAGTG +
Preference number: 4 (lower is better)
Translates to: CPTTIRIQHIQAQNRSPASSGEN*SLSNTV
Trigger: CACTGTGTTCGAGAGGGACCAGTTCTCACCAGATGA...TGCTGGTGACCTGTTCTGTGCTTGAATGTGCTGAATCCTGATTGTTGTAGGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000381318.8
CDS-3UTR CCA 90 bp TATGGGATTTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAGTCATCTGGTGAGAACTaGTCCCTCTCGAACACAGTG +
Preference number: 4 (lower is better)
Translates to: YGISATLEAIMRPVVRTKSSGEN*SLSNTV
Trigger: CACTGTGTTCGAGAGGGACCAGTTCTCACCAGATGA...CTTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAAATCCCATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CCA 90 bp TTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAGGAAAACACAAGACACTTCGTAACTaGACCTTTGGAGCCCTGGTC +
Preference number: 4 (lower is better)
Translates to: FSDPRSHNETCSEDKGKHKTLRN*TFGALV
Trigger: GACCAGGGCTCCAAAGGTCCAGTTACGAAGTGTCTT...GTGTTTTCCTTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CCA 90 bp AGCTGCTGCGTCCCACCAACAAAAATTCCCTTCCACCTAAAATTCCAGAAGTCAAGCACAGCCCCTTCTTaGGCTAAAGGAGATCAGAGT +
Preference number: 4 (lower is better)
Translates to: SCCVPPTKIPFHLKFQKSSTAPS*AKGDQS
Trigger: ACTCTGATCTCCTTTAGCCCAAGAAGGGGCTGTGCT...TGACTTCTGGAATTTTAGGTGGAAGGGAATTTTTGTTGGTGGGACGCAGCAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CCA 90 bp GGGATTTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAGGAAATCTTCAGGCTCTCATaGTCACAGCAAACCTGGTTC +
Preference number: 4 (lower is better)
Translates to: GISATLEAIMRPVVRTKEIFRLS*SQQTWF
Trigger: GAACCAGGTTTGCTGTGACCATGAGAGCCTGAAGAT...TTCCTTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAAATCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CCA 90 bp TTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAGGAAAACACCATGCTACCGGTTTCTaGGGCTACTGGTTATGCTTC +
Preference number: 4 (lower is better)
Translates to: FSDPRSHNETCSEDKGKHHATGF*GYWLCF
Trigger: GAAGCATAACCAGTAGCCCCAGAAACCGGTAGCATG...GTGTTTTCCTTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CCA 90 bp GTTGACCAGCCAATTACTTCCTCCGTGTCAGGTCTAACCAGAAGAGGTCTGCATCAGCCTTCCCAGAAATaGATTCATCTTCTGGGTCAT +
Preference number: 4 (lower is better)
Translates to: VDQPITSSVSGLTRRGLHQPSQK*IHLLGH
Trigger: ATGACCCAGAAGATGAATCCATTTCTGGGAAGGCTG...ATGCAGACCTCTTCTGGTTAGACCTGACACGGAGGAAGTAATTGGCTGGTCAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CCA 90 bp ATACCAAATGGTGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGCTCACTGGAGACCCCTaGCGCGCTAGGCTTGAACCC +
Preference number: 4 (lower is better)
Translates to: IPNGGFLEKEYNFQTACVLTGDP*RARLEP
Trigger: GGGTTCAAGCCTAGCGCGCCAGGGGTCTCCAGTGAG...CACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCACCATTTGGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CCA 90 bp GGGATTTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAGGAATTGAAGGCAGAAGGTTaGAAAAGGCTTGCTGTCCTC +
Preference number: 4 (lower is better)
Translates to: GISATLEAIMRPVVRTKELKAEG*KRLAVL
Trigger: GAGGACAGCAAGCCTTTTCCAACCTTCTGCCTTCAA...TTCCTTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAAATCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CCA 90 bp ATACCAAATGGTGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGCCAGGGGGTGAAGGCTaGAGGAGCAAGTGTCCAGCC +
Preference number: 4 (lower is better)
Translates to: IPNGGFLEKEYNFQTACVPGGEG*RSKCPA
Trigger: GGCTGGACACTTGCTCCTCCAGCCTTCACCCCCTGG...CACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCACCATTTGGTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CCA 90 bp TGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGGCCGTGGGCTGCCAAGGAAGCCTGCGTaGCACATGGATCTGATGAAA +
Preference number: 4 (lower is better)
Translates to: WFLRKGIQFPDSMCGRGLPRKPA*HMDLMK
Trigger: TTTCATCAGATCCATGTGCCACGCAGGCTTCCTTGG...CAGCCCACGGCCACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CCA 90 bp TGTCCTACAACAATCAGGATTCAGCACATTCAAGCACAGAACAGGTCACCAGCAAAGGGGCACTTCTGGTaGCCAAGTACAGAAAGTCTG +
Preference number: 4 (lower is better)
Translates to: CPTTIRIQHIQAQNRSPAKGHFW*PSTESL
Trigger: CAGACTTTCTGTACTTGGCCACCAGAAGTGCCCCTT...TGCTGGTGACCTGTTCTGTGCTTGAATGTGCTGAATCCTGATTGTTGTAGGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CCA 90 bp ATACCAAATGGTGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGCTGGCAGGCCTTAGGTaGCCTTCCAAGGCTGCGCCT +
Preference number: 4 (lower is better)
Translates to: IPNGGFLEKEYNFQTACVLAGLR*PSKAAP
Trigger: AGGCGCAGCCTTGGAAGGCCACCTAAGGCCTGCCAG...CACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCACCATTTGGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CCA 90 bp ACTGAAGTGCAACTGAACGAGGAGGAGAGGTCCTCGCTCTCTGCACCATGTGAACACCTTCGCTTTAATTaGGCTCATTCTATACGTCTT +
Preference number: 4 (lower is better)
Translates to: TEVQLNEEERSSLSAPCEHLRFN*AHSIRL
Trigger: AAGACGTATAGAATGAGCCCAATTAAAGCGAAGGTG...TTCACATGGTGCAGAGAGCGAGGACCTCTCCTCCTCGTTCAGTTGCACTTCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR TCA 90 bp CAGGATTCAGCACATTCAAGCACAGAACAGGTCACCAGCAACGACTGCTGCTATAAAGGTGTTGGAAACTaGGCCATGGTTCTGTTACTT +
Preference number: 4 (lower is better)
Translates to: QDSAHSSTEQVTSNDCCYKGVGN*AMVLLL
Trigger: AAGTAACAGAACCATGGCTCAGTTTCCAACACCTTT...ATAGCAGCAGTCGTTGCTGGTGACCTGTTCTGTGCTTGAATGTGCTGAATCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000381318.8
CDS-3UTR TCA 90 bp AAAAGGAATACAATTTCCAGACAGCATGTGTGGCCGTGGGCTGGGACCCTGCTGATGGAAAACTCCACTTaGTCCATTCTTCCATCATTA +
Preference number: 4 (lower is better)
Translates to: KRNTISRQHVWPWAGTLLMENST*SILPSL
Trigger: TAATGATGGAAGAATGGATCAAGTGGAGTTTTCCAT...CAGCAGGGTCCCAGCCCACGGCCACACATGCTGTCTGGAAATTGTATTCCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR TCA 90 bp TGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGGCCGTGGGCTGAGTGCAGAGGGTAGCTaGTATCCTTGTAGCTTCAGT +
Preference number: 4 (lower is better)
Translates to: WFLRKGIQFPDSMCGRGLSAEGS*YPCSFS
Trigger: ACTGAAGCTACAAGGATATCAGCTACCCTCTGCACT...CAGCCCACGGCCACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR TCA 90 bp CAACCAGATAAATCTGAGACCGAACAAAAACACAGAGTGCTTTCTCATGTGGCTAATGTGGCTGCAGGATaGGCAAATGCAGGCAGAGGT +
Preference number: 4 (lower is better)
Translates to: QPDKSETEQKHRVLSHVANVAAG*ANAGRG
Trigger: ACCTCTGCCTGCATTTGCTCATCCTGCAGCCACATT...AGCCACATGAGAAAGCACTCTGTGTTTTTGTTCGGTCTCAGATTTATCTGGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR TCA 90 bp GATAAATCTGAGACCGAACAAAAACACAGAGTGCTTTCTCATGTGGCTACAAGGTTCAGTCTTGATGACTaGGGAACAGCCCACTCTGCC +
Preference number: 4 (lower is better)
Translates to: DKSETEQKHRVLSHVATRFSLDD*GTAHSA
Trigger: GGCAGAGTGGGCTGTTCCTCAGTCATCAAGACTGAA...CCTTGTAGCCACATGAGAAAGCACTCTGTGTTTTTGTTCGGTCTCAGATTTATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR TCA 90 bp GATGTTGAATCAGTCACTGGTTTCACTGGAGCGGGAACCTCATTTTCTGGGATTCATATTGAAGCCAGCTaGGCCTGTGGTAAACTTGAC +
Preference number: 4 (lower is better)
Translates to: DVESVTGFTGAGTSFSGIHIEAS*ACGKLD
Trigger: GTCAAGTTTACCACAGGCTCAGCTGGCTTCAATATG...AATCCCAGAAAATGAGGTTCCCGCTCCAGTGAAACCAGTGACTGATTCAACATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379960.9
CDS-3UTR TCA 90 bp CTATGGGATTTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAACATATTGAAGCCAGCTaGGCCTGTGGTAAACTTGAC +
Preference number: 4 (lower is better)
Translates to: LWDFSDPRSHNETCSEDKHIEAS*ACGKLD
Trigger: GTCAAGTTTACCACAGGCTCAGCTGGCTTCAATATG...TTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAAATCCCATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR TCA 90 bp AACAGGGCTTCAGCTACAGCATATCTAACACACAAACGGACCATGAGCTCCATTCATATTGAAGCCAGCTaGGCCTGTGGTAAACTTGAC +
Preference number: 4 (lower is better)
Translates to: NRASATAYLTHKRTMSSIHIEAS*ACGKLD
Trigger: GTCAAGTTTACCACAGGCTCAGCTGGCTTCAATATG...AATGGAGCTCATGGTCCGTTTGTGTGTTAGATATGCTGTAGCTGAAGCCCTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR TCA 90 bp TGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGGCCGTGGGCTGAGAAAGATTCCATATTaGAGCCAGCTGAGCCTGTGG +
Preference number: 4 (lower is better)
Translates to: WFLRKGIQFPDSMCGRGLRKIPY*SQLSLW
Trigger: CCACAGGCTCAGCTGGCTTCAATATGGAATCTTTCT...CAGCCCACGGCCACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR TCA 90 bp TGGAGCGGGAACCTCATTTTCTGGGATTTTCTCTGCATAGTTTGCAGGGAACCACAGATGTTGAGCTTATaGCAGATATACCACTGCCAG +
Preference number: 4 (lower is better)
Translates to: WSGNLIFWDFLCIVCREPQMLSL*QIYHCQ
Trigger: CTGGCAGTGGTATATCTGTCATAAGCTCAACATCTG...TGGTTCCCTGCAAACTATGCAGAGAAAATCCCAGAAAATGAGGTTCCCGCTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379960.9
CDS-3UTR TCA 90 bp CTTATGGTGGCTCAGACTATACTGTCTGAGGGCTTCATCATGCTACCGGTTTCTCAGATGTTGAGCTTATaGCAGATATACCACTGCCAG +
Preference number: 4 (lower is better)
Translates to: LMVAQTILSEGFIMLPVSQMLSL*QIYHCQ
Trigger: CTGGCAGTGGTATATCTGTCATAAGCTCAACATCTG...AGAAACCGGTAGCATGATGAAGCCCTCAGACAGTATAGTCTGAGCCACCATAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR TCA 90 bp GTTTCACTGGAGCGGGAACCTCATTTTCTGGGATTTTCTCTGCATAGTTTGCAGTCCTCTGGTAGCCTCTaGTCTACAGATGTTGAGCTT +
Preference number: 4 (lower is better)
Translates to: VSLEREPHFLGFSLHSLQSSGSL*STDVEL
Trigger: AAGCTCAACATCTGTAGATCAGAGGCTACCAGAGGA...CTGCAAACTATGCAGAGAAAATCCCAGAAAATGAGGTTCCCGCTCCAGTGAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379960.9
CDS-3UTR TCA 90 bp TTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAGGAAAACACTCCTCTGGTAGCCTCTaGTCTACAGATGTTGAGCTT +
Preference number: 4 (lower is better)
Translates to: FSDPRSHNETCSEDKGKHSSGSL*STDVEL
Trigger: AAGCTCAACATCTGTAGATCAGAGGCTACCAGAGGA...GTGTTTTCCTTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR TCA 90 bp GGTGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGGCCGTGGGCGTTGCTGTAGATGGGTaGTTTCGGCAATTCTCAACT +
Preference number: 4 (lower is better)
Translates to: GGFLEKEYNFQTACVAVGVAVDG*FRQFST
Trigger: AGTTGAGAATTGCCGAAATCACCCATCTACAGCAAC...GCCCACGGCCACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR TCA 90 bp GATAAATCTGAGACCGAACAAAAACACAGAGTGCTTTCTCATGTGGCTACAAGGTGCTTGTCCCTTTCCTaGGCTCGTCTTTGGGCTTCT +
Preference number: 4 (lower is better)
Translates to: DKSETEQKHRVLSHVATRCLSLS*ARLWAS
Trigger: AGAAGCCCAAAGACGAGCTCAGGAAAGGGACAAGCA...CCTTGTAGCCACATGAGAAAGCACTCTGTGTTTTTGTTCGGTCTCAGATTTATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR TCA 90 bp AGACTGTGGATATCGTTGATCGTAACGACCTCAGTGGTGTTGTCTACTGATTTTGGCAGGGGCAGATGTTaGATCAGTCACTGGTTTCAC +
Preference number: 4 (lower is better)
Translates to: RLWISLIVTTSVVLSTDFGRGRC*ISHWFH
Trigger: GTGAAACCAGTGACTGATTCAACATCTGCCCCTGCC...AAAATCAGTAGACAACACCACTGAGGTCGTTACGATCAACGATATCCACAGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR TCA 90 bp CCAAATGGTGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGGCCGGCAGGGGCAGATGTTaGATCAGTCACTGGTTTCAC +
Preference number: 4 (lower is better)
Translates to: PNGGFLEKEYNFQTACVAGRGRC*ISHWFH
Trigger: GTGAAACCAGTGACTGATTCAACATCTGCCCCTGCC...GGCCACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCACCATTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR TCA 90 bp AACAGGGCTTCAGCTACAGCATATCTAACACACAAACGGACCATGAGCTCCATTACTAGCAGGACTCTCTaGAGAACCAGAATCCATGCT +
Preference number: 4 (lower is better)
Translates to: NRASATAYLTHKRTMSSITSRTL*RTRIHA
Trigger: AGCATGGATTCTGGTTCTTCAGAGAGTCCTGCTAGT...AATGGAGCTCATGGTCCGTTTGTGTGTTAGATATGCTGTAGCTGAAGCCCTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR TCA 90 bp GGGATTTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAGGAAAGTTCCAGAGCCCTCTaGATCTTTAAGCCTCACATA +
Preference number: 4 (lower is better)
Translates to: GISATLEAIMRPVVRTKESSRAL*IFKPHI
Trigger: TATGTGAGGCTTAAAGATTCAGAGGGCTCTGGAACT...TTCCTTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAAATCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR TCA 90 bp GCTTTGAGGGGCCTGTCTTTGCCATCCCATATCCCTGTGACTGAATACCAAATGTTTGAAAAATCTCTGTaGCCAGCTGCAGGTCATTCA +
Preference number: 4 (lower is better)
Translates to: ALRGLSLPSHIPVTEYQMFEKSL*PAAGHS
Trigger: TGAATGACCTGCAGCTGGTCACAGAGATTTTTCAAA...CATTTGGTATTCAGTCACAGGGATATGGGATGGCAAAGACAGGCCCCTCAAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR TCA 90 bp TTTTTGAAAAATCTCTGTGACCAGCTGCAGGTCATTCACATAGTTCTCCTCGGTGGTTTGATTTGGGGCTaGAGACTTTGTCGGTGCCAG +
Preference number: 4 (lower is better)
Translates to: FLKNLCDQLQVIHIVLLGGLIWG*RLCRCQ
Trigger: CTGGCACCGACAAAGTCTTCAGCCCCAAATCAAACC...ACCGAGGAGAACTATGTGAATGACCTGCAGCTGGTCACAGAGATTTTTCAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000381285.8
CDS-3UTR TCA 90 bp ATTGTTTCGGGGCAGGGAGGATTGTCGAGAATGATTCCTAGGAGCTTTGAGGGGTTTATACTGCAGGTTTaGTTTGGGGCTGAAGACTTT +
Preference number: 4 (lower is better)
Translates to: IVSGQGGLSRMIPRSFEGFILQV*FGAEDF
Trigger: AAAGTCTTCAGCCCCAAATCAAACCTGCAGTATAAA...CCCCTCAAAGCTCCTAGGAATCATTCTCGACAATCCTCCCTGCCCCGAAACAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR TCA 90 bp CCAAATGGTGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGGCCGCTCCAGGTCTCGGATaGAGAACTGGCAGTTGGAAT +
Preference number: 4 (lower is better)
Translates to: PNGGFLEKEYNFQTACVAAPGLG*RTGSWN
Trigger: ATTCCAACTGCCAGTTCTTCATCCGAGACCTGGAGC...GGCCACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCACCATTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR TCA 90 bp TTGTTTCATGAAACAGGAAATTGTTTCGGGGCAGGGAGGATTGTCGAGAATGATGCTCCAGGTCTCGGATaGAGAACTGGCAGTTGGAAT +
Preference number: 4 (lower is better)
Translates to: LFHETGNCFGAGRIVENDAPGLG*RTGSWN
Trigger: ATTCCAACTGCCAGTTCTTCATCCGAGACCTGGAGC...ATCATTCTCGACAATCCTCCCTGCCCCGAAACAATTTCCTGTTTCATGAAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR TCA 90 bp GGGATTTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAGGAACCATATCCCTGTGACTaGATACCAAATGGTGGTTTC +
Preference number: 4 (lower is better)
Translates to: GISATLEAIMRPVVRTKEPYPCD*IPNGGF
Trigger: GAAACCACCATTTGGTATTCAGTCACAGGGATATGG...TTCCTTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAAATCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR TCA 90 bp TTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAGGAAAACACCATCCCATATCCCTGTaGCTGAATACCAAATGGTGG +
Preference number: 4 (lower is better)
Translates to: FSDPRSHNETCSEDKGKHHPISL*LNTKWW
Trigger: CCACCATTTGGTATTCAGTCACAGGGATATGGGATG...GTGTTTTCCTTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR TCA 90 bp ATTGTTTCGGGGCAGGGAGGATTGTCGAGAATGATTCCTAGGAGCTTTGAGGGGCACAGCTTTGTTTCATaGAACAGGAAATTGTTTCGG +
Preference number: 4 (lower is better)
Translates to: IVSGQGGLSRMIPRSFEGHSFVS*NRKLFR
Trigger: CCGAAACAATTTCCTGTTTCATGAAACAAAGCTGTG...CCCCTCAAAGCTCCTAGGAATCATTCTCGACAATCCTCCCTGCCCCGAAACAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR TCA 90 bp CACCATCAACCTTCCAATGCCTGTTGCCCTTTGGGAACGGACCAGGTACGCTTTACCAAAAAGAGCTGTTaGAATGTCCTACAACAATCA +
Preference number: 4 (lower is better)
Translates to: HHQPSNACCPLGTDQVRFTKKSC*NVLQQS
Trigger: TGATTGTTGTAGGACATTTCAACAGCTCTTTTTGGT...AAAGCGTACCTGGTCCGTTCCCAAAGGGCAACAGGCATTGGAAGGTTGATGGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381285.8
CDS-3UTR TCA 90 bp TGTCCTACAACAATCAGGATTCAGCACATTCAAGCACAGAACAGGTCACCAGCAAATAATAGGACACTATaGGTGGGTGACCTGGGACCT +
Preference number: 4 (lower is better)
Translates to: CPTTIRIQHIQAQNRSPANNRTL*VGDLGP
Trigger: AGGTCCCAGGTCACCCACTCATAGTGTCCTATTATT...TGCTGGTGACCTGTTCTGTGCTTGAATGTGCTGAATCCTGATTGTTGTAGGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR TCA 90 bp ATTGTTTCGGGGCAGGGAGGATTGTCGAGAATGATTCCTAGGAGCTTTGAGGGGTTTGCATTATTTCTCTaGAGAACCCCACACAAAGCA +
Preference number: 4 (lower is better)
Translates to: IVSGQGGLSRMIPRSFEGFALFL*RTPHKA
Trigger: TGCTTTGTGTGGGGTTCTTCAGAGAAATAATGCAAA...CCCCTCAAAGCTCCTAGGAATCATTCTCGACAATCCTCCCTGCCCCGAAACAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR TCA 90 bp ACGCTATTAATGAAATGCCCCTGGAGAACACTTGCAGAACTTCCCGTAGTCCGGACTGACCCTGAAATTTaGCAAGCACACATAGTGTCA +
Preference number: 4 (lower is better)
Translates to: TLLMKCPWRTLAELPVVRTDPEI*QAHIVS
Trigger: TGACACTATGTGTGCTTGTCAAATTTCAGGGTCAGT...CCGGACTACGGGAAGTTCTGCAAGTGTTCTCCAGGGGCATTTCATTAATAGCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR TCA 90 bp AAAAGGAATACAATTTCCAGACAGCATGTGTGGCCGTGGGCTGGGACCCTGCTGAGATTGCATGACGCATaGAAACAAAGCCATAATTTG +
Preference number: 4 (lower is better)
Translates to: KRNTISRQHVWPWAGTLLRLHDA*KQSHNL
Trigger: CAAATTATGGCTTTGTTTTCATGCGTCATGCAATCT...CAGCAGGGTCCCAGCCCACGGCCACACATGCTGTCTGGAAATTGTATTCCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR TCA 90 bp AGCTGCTGCGTCCCACCAACAAAAATTCCCTTCCACCTAAAATTCCAGAAGTCATTCCAAGGCTGCGCCTaGACAAAGAAATCTCTGAAC +
Preference number: 4 (lower is better)
Translates to: SCCVPPTKIPFHLKFQKSFQGCA*TKKSLN
Trigger: GTTCAGAGATTTCTTTGTTCAGGCGCAGCCTTGGAA...TGACTTCTGGAATTTTAGGTGGAAGGGAATTTTTGTTGGTGGGACGCAGCAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR TCA 90 bp CCAAATGGTGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGGCCGGACAGTTGACTGGCTaGCTTGTTTCCACTCACAGC +
Preference number: 4 (lower is better)
Translates to: PNGGFLEKEYNFQTACVAGQLTG*LVSTHS
Trigger: GCTGTGAGTGGAAACAAGTCAGCCAGTCAACTGTCC...GGCCACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCACCATTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR TCA 90 bp CCAAATGGTGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGGCCGGCTTTCATCCACCATaGCTATGTCTCCTGGCTGGA +
Preference number: 4 (lower is better)
Translates to: PNGGFLEKEYNFQTACVAGFHPP*LCLLAG
Trigger: TCCAGCCAGGAGACATAGTCATGGTGGATGAAAGCC...GGCCACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCACCATTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000399367.7
CDS-3UTR GCA 90 bp TTTATTGAGAGCTTCCAACTAGTGTTTAAAAGACAAACAGGGCTTCAGCTACAGTCCTGCTCCTTGCGCTaGTGTTCCAGGAGAGCTTGC +
Preference number: 4 (lower is better)
Translates to: FIESFQLVFKRQTGLQLQSCSLR*CSRRAC
Trigger: GCAAGCTCTCCTGGAACAGCAGCGCAAGGAGCAGGA...CTGTAGCTGAAGCCCTGTTTGTCTTTTAAACACTAGTTGGAAGCTCTCAATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR GCA 90 bp CAACCAGATAAATCTGAGACCGAACAAAAACACAGAGTGCTTTCTCATGTGGCTGTTCCAGTTGTCTTTTaGGCTCTTGCTCCTGGCGCT +
Preference number: 4 (lower is better)
Translates to: QPDKSETEQKHRVLSHVAVPVVF*ALAPGA
Trigger: AGCGCCAGGAGCAAGAGCGCAAAAGACAACTGGAAC...AGCCACATGAGAAAGCACTCTGTGTTTTTGTTCGGTCTCAGATTTATCTGGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR GCA 90 bp AGACTGTGGATATCGTTGATCGTAACGACCTCAGTGGTGTTGTCTACTGATTTTGTTCCAGTTGTCTTTTaGGCTCTTGCTCCTGGCGCT +
Preference number: 4 (lower is better)
Translates to: RLWISLIVTTSVVLSTDFVPVVF*ALAPGA
Trigger: AGCGCCAGGAGCAAGAGCGCAAAAGACAACTGGAAC...AAAATCAGTAGACAACACCACTGAGGTCGTTACGATCAACGATATCCACAGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR GCA 90 bp GATAAATCTGAGACCGAACAAAAACACAGAGTGCTTTCTCATGTGGCTACAAGGCGTTCTAGCTCCCGCTaGTTTTCCAGTTGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: DKSETEQKHRVLSHVATRRSSSR*FSSCFS
Trigger: GGAGAAGCAACTGGAAAAGCAGCGGGAGCTAGAACG...CCTTGTAGCCACATGAGAAAGCACTCTGTGTTTTTGTTCGGTCTCAGATTTATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR GCA 90 bp TGCAATATGATTAGAGCATCGTACAAGGTAATAGCTTTGCCATGGAAAGAACTACTCTCCTCCTCTCTCTaGCGTTCTAGCTCCCGCTGC +
Preference number: 4 (lower is better)
Translates to: CNMIRASYKVIALPWKELLSSSL*RSSSRC
Trigger: GCAGCGGGAGCTAGAACGGCAGAGAGAGGAGGAGAG...TAGTTCTTTCCATGGCAAAGCTATTACCTTGTACGATGCTCTAATCATATTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR GCA 90 bp GGTTTCAACTCGATGCCTTCAACCACGTTCACCATCAACCTTCCAATGCCTGTTGTGCTCTCAATTTCTTaGCTTTGGGTGGTCAATCGA +
Preference number: 4 (lower is better)
Translates to: GFNSMPSTTFTINLPMPVVLSIS*LWVVNR
Trigger: TCGATTGACCACCCAAAGGCAAGAAATTGAGAGCAC...AACAGGCATTGGAAGGTTGATGGTGAACGTGGTTGAAGGCATCGAGTTGAAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381285.8
CDS-3UTR GCA 90 bp ACAGAATCCTCCTTAGGTGGCCTAAGGGGCACTTCTGGTGGCCAAGTACAGAAAGATTCCTGTAATTGTTaGTGTAGATGGGTGATTTCG +
Preference number: 4 (lower is better)
Translates to: TESSLGGLRGTSGGQVQKDSCNC*CRWVIS
Trigger: CGAAATCACCCATCTACAGCAACAATTACAGGAATC...TTTCTGTACTTGGCCACCAGAAGTGCCCCTTAGGCCACCTAAGGAGGATTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR GCA 90 bp AACAGGGCTTCAGCTACAGCATATCTAACACACAAACGGACCATGAGCTCCATTAGTTGGTCTCGTAGGTaGTGCCGAGCTAGTTCTTTT +
Preference number: 4 (lower is better)
Translates to: NRASATAYLTHKRTMSSISWSRR*CRASSF
Trigger: AAAAGAACTAGCTCGGCAGCACCTACGAGACCAACT...AATGGAGCTCATGGTCCGTTTGTGTGTTAGATATGCTGTAGCTGAAGCCCTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR GCA 90 bp CTATGGGATTTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAAGTTGGTCTCGTAGGTaGTGCCGAGCTAGTTCTTTT +
Preference number: 4 (lower is better)
Translates to: LWDFSDPRSHNETCSEDKSWSRR*CRASSF
Trigger: AAAAGAACTAGCTCGGCAGCACCTACGAGACCAACT...TTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAAATCCCATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR GCA 90 bp TGCAATATGATTAGAGCATCGTACAAGGTAATAGCTTTGCCATGGAAAGAACTATGCAGTGGACCAGGGTaGCTGGACAGCTGGCTTAGC +
Preference number: 4 (lower is better)
Translates to: CNMIRASYKVIALPWKELCSGPG*LDSWLS
Trigger: GCTAAGCCAGCTGTCCAGGCACCCTGGTCCACTGCA...TAGTTCTTTCCATGGCAAAGCTATTACCTTGTACGATGCTCTAATCATATTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR GCA 90 bp ATACCAAATGGTGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGTGCAGTGGACCAGGGTaGCTGGACAGCTGGCTTAGC +
Preference number: 4 (lower is better)
Translates to: IPNGGFLEKEYNFQTACVCSGPG*LDSWLS
Trigger: GCTAAGCCAGCTGTCCAGGCACCCTGGTCCACTGCA...CACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCACCATTTGGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR GCA 90 bp AGCCAAAAGAGATTTTTCCAACATGGCTGCCAACCGAGACCCAGTGACCCAACATTCTGGGATTTTCTCTaGATAGTTTGCAGGGAACCA +
Preference number: 4 (lower is better)
Translates to: SQKRFFQHGCQPRPSDPTFWDFL*IVCREP
Trigger: TGGTTCCCTGCAAACTATGCAGAGAAAATCCCAGAA...TGTTGGGTCACTGGGTCTCGGTTGGCAGCCATGTTGGAAAAATCTCTTTTGGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000381318.8
CDS-3UTR GCA 90 bp CCAACTCAACCAGATAAATCTGAGACCGAACAAAAACACAGAGTGCTTTCTCATGTAAAGGCGGACCTCTaGCTTAACTGGCCGGCACTT +
Preference number: 4 (lower is better)
Translates to: PTQPDKSETEQKHRVLSHVKADL*LNWPAL
Trigger: AAGTGCCGGCCAGTTAAGGCAGAGGTCCGCCTTTAC...ATGAGAAAGCACTCTGTGTTTTTGTTCGGTCTCAGATTTATCTGGTTGAGTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR GCA 90 bp TTTATTGAGAGCTTCCAACTAGTGTTTAAAAGACAAACAGGGCTTCAGCTACAGAACGACCGGCTTGGCTaGTGGAGAGGCTACTCGCTT +
Preference number: 4 (lower is better)
Translates to: FIESFQLVFKRQTGLQLQNDRLG*WRGYSL
Trigger: AAGCGAGTAGCCTCTCCAGCAGCCAAGCCGGTCGTT...CTGTAGCTGAAGCCCTGTTTGTCTTTTAAACACTAGTTGGAAGCTCTCAATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR GCA 90 bp AAAAATCTCTGTGACCAGCTGCAGGTCATTCACATAGTTCTCCTCGGTGACAATTTTTTCCCACGTGCTTaGAGCTCTCCTTCCCACCAT +
Preference number: 4 (lower is better)
Translates to: KNLCDQLQVIHIVLLGDNFFPRA*SSPSHH
Trigger: ATGGTGGGAAGGAGAGCTGCAAGCACGTGGGAAAAA...ATTGTCACCGAGGAGAACTATGTGAATGACCTGCAGCTGGTCACAGAGATTTTT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000381285.8
CDS-3UTR GCA 90 bp CCAACTCAACCAGATAAATCTGAGACCGAACAAAAACACAGAGTGCTTTCTCATGCGCTTTTTCCCACGTaGTTGCAGCTCTCCTTCCCA +
Preference number: 4 (lower is better)
Translates to: PTQPDKSETEQKHRVLSHALFPT*LQLSFP
Trigger: TGGGAAGGAGAGCTGCAAGCACGTGGGAAAAAGCGC...ATGAGAAAGCACTCTGTGTTTTTGTTCGGTCTCAGATTTATCTGGTTGAGTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR GCA 90 bp TTGTTTCATGAAACAGGAAATTGTTTCGGGGCAGGGAGGATTGTCGAGAATGATCCCCGGACATCTTCTTaGGGACTCTCAGCGCTTTTA +
Preference number: 4 (lower is better)
Translates to: LFHETGNCFGAGRIVENDPRTSS*GLSALL
Trigger: TAAAAGCGCTGAGAGTCCGCAAGAAGATGTCCGGGG...ATCATTCTCGACAATCCTCCCTGCCCCGAAACAATTTCCTGTTTCATGAAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR GCA 90 bp ATACCAAATGGTGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGGCCTTCTCCAGGGCGTaGTTCAAGTGGCTGTGGTCC +
Preference number: 4 (lower is better)
Translates to: IPNGGFLEKEYNFQTACVAFSRA*FKWLWS
Trigger: GGACCACAGCCACTTGAAGCACGCCCTGGAGAAGGC...CACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCACCATTTGGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR GCA 90 bp TGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGGCCGTGGGCTGCATACAGCTCCTTGTTaGTCTTGGCCTTGTAGAGCT +
Preference number: 4 (lower is better)
Translates to: WFLRKGIQFPDSMCGRGLHTAPC*SWPCRA
Trigger: AGCTCTACAAGGCCAAGAGCAACAAGGAGCTGTATG...CAGCCCACGGCCACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR GCA 90 bp GAAGGAACGGCTATAACGGTGCACATGCTGGAAACTTCCATAGACCAGCTCTTCTTCATTTATGCTTTCTaGTCGGAGAGTATAGACGCG +
Preference number: 4 (lower is better)
Translates to: EGTAITVHMLETSIDQLFFIYAF*SESIDA
Trigger: CGCGTCTATACTCTCCGAGCAGAAAGCATAAATGAA...GAAGAGCTGGTCTATGGAAGTTTCCAGCATGTGCACCGTTATAGCCGTTCCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000381318.8
CDS-3UTR GCA 90 bp CCCTTTGGGAACGGACCAGGTACGCTTTCTCGCGCTTCTTTTTCTCAGTCTCTACAGTCCTTTCATTTATaGTTTCTGCTCGGAGAGTAT +
Preference number: 4 (lower is better)
Translates to: PFGNGPGTLSRASFSQSLQSFHL*FLLGEY
Trigger: ATACTCTCCGAGCAGAAAGCATAAATGAAAGGACTG...TAGAGACTGAGAAAAAGAAGCGCGAGAAAGCGTACCTGGTCCGTTCCCAAAGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381285.8
CDS-3UTR GCA 90 bp ATTGTTTCGGGGCAGGGAGGATTGTCGAGAATGATTCCTAGGAGCTTTGAGGGGCAGTCCTTTCATTTATaGTTTCTGCTCGGAGAGTAT +
Preference number: 4 (lower is better)
Translates to: IVSGQGGLSRMIPRSFEGQSFHL*FLLGEY
Trigger: ATACTCTCCGAGCAGAAAGCATAAATGAAAGGACTG...CCCCTCAAAGCTCCTAGGAATCATTCTCGACAATCCTCCCTGCCCCGAAACAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR GCA 90 bp CCAAATGGTGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGGCCCCTCACAGTACGGGTTaGTCTTTCCATGTGACCGAC +
Preference number: 4 (lower is better)
Translates to: PNGGFLEKEYNFQTACVAPHSTG*SFHVTD
Trigger: GTCGGTCACATGGAAAGAGCAACCCGTACTGTGAGG...GGCCACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCACCATTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR GCA 90 bp CCAAATGGTGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGGCCGGCTCATCAAACAACTaGAGGTCCAAGCGGACCACA +
Preference number: 4 (lower is better)
Translates to: PNGGFLEKEYNFQTACVAGSSNN*RSKRTT
Trigger: TGTGGTCCGCTTGGACCTGCAGTTGTTTGATGAGCC...GGCCACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCACCATTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR GCA 90 bp GTTGACCAGCCAATTACTTCCTCCGTGTCAGGTCTAACCAGAAGAGGTCTGCATTGGTTTGAGACTCCATaGATCACCCATGTTTCTCAA +
Preference number: 4 (lower is better)
Translates to: VDQPITSSVSGLTRRGLHWFETP*ITHVSQ
Trigger: TTGAGAAACATGGGTGATGCATGGAGTCTCAAACCA...ATGCAGACCTCTTCTGGTTAGACCTGACACGGAGGAAGTAATTGGCTGGTCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR GCA 90 bp GAAACTTCCATAGACCAGCTCTTCAAAGAGCTAAGCCAGGGCCTGATCAGACCGTTGATCCTGATGAAATaGAGACATATCCTGGATCTG +
Preference number: 4 (lower is better)
Translates to: ETSIDQLFKELSQGLIRPLILMK*RHILDL
Trigger: CAGATCCAGGATATGTCTGCATTTCATCAGGATCAA...CGGTCTGATCAGGCCCTGGCTTAGCTCTTTGAAGAGCTGGTCTATGGAAGTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR GCA 90 bp ATTGTTTCGGGGCAGGGAGGATTGTCGAGAATGATTCCTAGGAGCTTTGAGGGGAAAAGCAAATGGAACTaGAAACATTTTGGAGCGTCC +
Preference number: 4 (lower is better)
Translates to: IVSGQGGLSRMIPRSFEGKSKWN*KHFGAS
Trigger: GGACGCTCCAAAATGTTTGCAGTTCCATTTGCTTTT...CCCCTCAAAGCTCCTAGGAATCATTCTCGACAATCCTCCCTGCCCCGAAACAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR GCA 90 bp TATGGGATTTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAGAGCTGCAAATGCTGGTaGGCTAGAAATAGCAACTGG +
Preference number: 4 (lower is better)
Translates to: YGISATLEAIMRPVVRTKSCKCW*ARNSNW
Trigger: CCAGTTGCTATTTCTAGCGCACCAGCATTTGCAGCT...CTTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAAATCCCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381285.8
CDS-3UTR GCA 90 bp ACTGAAGTGCAACTGAACGAGGAGGAGAGGTCCTCGCTCTCTGCACCATGTGAAAACAAAAACACAGAGTaGTTTCTCATGTGGCTACAA +
Preference number: 4 (lower is better)
Translates to: TEVQLNEEERSSLSAPCENKNTE*FLMWLQ
Trigger: TTGTAGCCACATGAGAAAGCACTCTGTGTTTTTGTT...TTCACATGGTGCAGAGAGCGAGGACCTCTCCTCCTCGTTCAGTTGCACTTCAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CCA 90 bp AGCTGCTGCGTCCCACCAACAAAAATTCCCTTCCACCTAAAATTCCAGAAGTCATTTCCTCTACAGTTATaGCCCAGATATCCAGGCTGC +
Preference number: 4 (lower is better)
Translates to: SCCVPPTKIPFHLKFQKSFPLQL*PRYPGC
Trigger: GCAGCCTGGATATCTGGGCCATAACTGTAGAGGAAA...TGACTTCTGGAATTTTAGGTGGAAGGGAATTTTTGTTGGTGGGACGCAGCAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CCA 90 bp GTTTCACTGGAGCGGGAACCTCATTTTCTGGGATTTTCTCTGCATAGTTTGCAGTTCCAACAACTGGAATaGATCCCATTGGCACTGGAG +
Preference number: 4 (lower is better)
Translates to: VSLEREPHFLGFSLHSLQFQQLE*IPLALE
Trigger: CTCCAGTGCCAATGGGATCCATTCCAGTTGTTGGAA...CTGCAAACTATGCAGAGAAAATCCCAGAAAATGAGGTTCCCGCTCCAGTGAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379960.9
CDS-3UTR CCA 90 bp TATGGGATTTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAGTTCCAACAACTGGAATaGATCCCATTGGCACTGGAG +
Preference number: 4 (lower is better)
Translates to: YGISATLEAIMRPVVRTKFQQLE*IPLALE
Trigger: CTCCAGTGCCAATGGGATCCATTCCAGTTGTTGGAA...CTTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAAATCCCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CCA 90 bp AGACTGTGGATATCGTTGATCGTAACGACCTCAGTGGTGTTGTCTACTGATTTTCCACTGGTGGGACACTaGCCACATCAAATGACTGTG +
Preference number: 4 (lower is better)
Translates to: RLWISLIVTTSVVLSTDFPLVGH*PHQMTV
Trigger: CACAGTCATTTGATGTGGCCAGTGTCCCACCAGTGG...AAAATCAGTAGACAACACCACTGAGGTCGTTACGATCAACGATATCCACAGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CCA 90 bp GATAAATCTGAGACCGAACAAAAACACAGAGTGCTTTCTCATGTGGCTACAAGGCCACTGGTGGGACACTaGCCACATCAAATGACTGTG +
Preference number: 4 (lower is better)
Translates to: DKSETEQKHRVLSHVATRPLVGH*PHQMTV
Trigger: CACAGTCATTTGATGTGGCCAGTGTCCCACCAGTGG...CCTTGTAGCCACATGAGAAAGCACTCTGTGTTTTTGTTCGGTCTCAGATTTATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CCA 90 bp CCAACTCAACCAGATAAATCTGAGACCGAACAAAAACACAGAGTGCTTTCTCATCCACTCTGCCACTGGTaGGACACTGGCCACATCAAA +
Preference number: 4 (lower is better)
Translates to: PTQPDKSETEQKHRVLSHPLCHW*DTGHIK
Trigger: TTTGATGTGGCCAGTGTCCCACCAGTGGCAGAGTGG...ATGAGAAAGCACTCTGTGTTTTTGTTCGGTCTCAGATTTATCTGGTTGAGTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CCA 90 bp GAAGGAACGGCTATAACGGTGCACATGCTGGAAACTTCCATAGACCAGCTCTTCTCAATTTCTTGCCTTTaGGTGGTCAATCGACATCTG +
Preference number: 4 (lower is better)
Translates to: EGTAITVHMLETSIDQLFSISCL*VVNRHL
Trigger: CAGATGTCGATTGACCACCCAAAGGCAAGAAATTGA...GAAGAGCTGGTCTATGGAAGTTTCCAGCATGTGCACCGTTATAGCCGTTCCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000381318.8
CDS-3UTR CCA 90 bp GTTCAGCCTCCATGGACTTTTGCTTCTGGAGTTGTTGCTTATTGTGTATTTCTCTCCACTTCATCCAGTTaGTCTCGTAGGTGCTGCCGA +
Preference number: 4 (lower is better)
Translates to: VQPPWTFASGVVAYCVFLSTSSS*SRRCCR
Trigger: TCGGCAGCACCTACGAGACCAACTGGATGAAGTGGA...GAGAAATACACAATAAGCAACAACTCCAGAAGCAAAAGTCCATGGAGGCTGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379960.9
CDS-3UTR CCA 90 bp TCCACCATGACTATGTCTCCTGGCTGGATAGTGATTTCATCATGGCTTCTGGATGTCGTTCAGCCTCCATaGACTTTTGCTTCTGGAGTT +
Preference number: 4 (lower is better)
Translates to: STMTMSPGWIVISSWLLDVVQPP*TFASGV
Trigger: AACTCCAGAAGCAAAAGTCCATGGAGGCTGAACGAC...ATCCAGAAGCCATGATGAAATCACTATCCAGCCAGGAGACATAGTCATGGTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379960.9
CDS-3UTR CCA 90 bp TCCACCATGACTATGTCTCCTGGCTGGATAGTGATTTCATCATGGCTTCTGGATTTCGTGGAGTTTTCTTaGTCTCTGATGCTCGTCCTC +
Preference number: 4 (lower is better)
Translates to: STMTMSPGWIVISSWLLDFVEFS*SLMLVL
Trigger: GAGGACGAGCATCAGAGACCAAGAAAACTCCACGAA...ATCCAGAAGCCATGATGAAATCACTATCCAGCCAGGAGACATAGTCATGGTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379960.9
CDS-3UTR CCA 90 bp CTATGGGATTTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAATTCGTGGAGTTTTCTTaGTCTCTGATGCTCGTCCTC +
Preference number: 4 (lower is better)
Translates to: LWDFSDPRSHNETCSEDKFVEFS*SLMLVL
Trigger: GAGGACGAGCATCAGAGACCAAGAAAACTCCACGAA...TTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAAATCCCATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CCA 90 bp AACAGGGCTTCAGCTACAGCATATCTAACACACAAACGGACCATGAGCTCCATTTTCGTGGAGTTTTCTTaGTCTCTGATGCTCGTCCTC +
Preference number: 4 (lower is better)
Translates to: NRASATAYLTHKRTMSSIFVEFS*SLMLVL
Trigger: GAGGACGAGCATCAGAGACCAAGAAAACTCCACGAA...AATGGAGCTCATGGTCCGTTTGTGTGTTAGATATGCTGTAGCTGAAGCCCTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CCA 90 bp CTTCTAGAACTTGAGGCTACTTACACAGAGGGATCTTTTCTCTCCTACCATCCCGACAGCTGGCTTAGCTaGTTCTTGGTGTTGATGGAA +
Preference number: 4 (lower is better)
Translates to: LLELEATYTEGSFLSYHPDSWLS*FLVLME
Trigger: TTCCATCAACACCAAGAACCAGCTAAGCCAGCTGTC...GGGATGGTAGGAGAGAAAAGATCCCTCTGTGTAAGTAGCCTCAAGTTCTAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CCA 90 bp AACAGGGCTTCAGCTACAGCATATCTAACACACAAACGGACCATGAGCTCCATTGACAGCTGGCTTAGCTaGTTCTTGGTGTTGATGGAA +
Preference number: 4 (lower is better)
Translates to: NRASATAYLTHKRTMSSIDSWLS*FLVLME
Trigger: TTCCATCAACACCAAGAACCAGCTAAGCCAGCTGTC...AATGGAGCTCATGGTCCGTTTGTGTGTTAGATATGCTGTAGCTGAAGCCCTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CCA 90 bp ACCTTCGCTTTAATTGGGCTCATTCTATACGTCTTTAAAACAGAGATACTGAACGTGGACCAGGGTGCCTaGACAGCTGGCTTAGCTGGT +
Preference number: 4 (lower is better)
Translates to: TFALIGLILYVFKTEILNVDQGA*TAGLAG
Trigger: ACCAGCTAAGCCAGCTGTCCAGGCACCCTGGTCCAC...GTTCAGTATCTCTGTTTTAAAGACGTATAGAATGAGCCCAATTAAAGCGAAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CCA 90 bp ATACCAAATGGTGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGGTGGACCAGGGTGCCTaGACAGCTGGCTTAGCTGGT +
Preference number: 4 (lower is better)
Translates to: IPNGGFLEKEYNFQTACVVDQGA*TAGLAG
Trigger: ACCAGCTAAGCCAGCTGTCCAGGCACCCTGGTCCAC...CACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCACCATTTGGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CCA 90 bp ACGCTATTAATGAAATGCCCCTGGAGAACACTTGCAGAACTTCCCGTAGTCCGGACTATGTCTCCTGGCTaGATAGTGATTTCATCATGG +
Preference number: 4 (lower is better)
Translates to: TLLMKCPWRTLAELPVVRTMSPG*IVISSW
Trigger: CCATGATGAAATCACTATCCAGCCAGGAGACATAGT...CCGGACTACGGGAAGTTCTGCAAGTGTTCTCCAGGGGCATTTCATTAATAGCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CCA 90 bp TTGCTCTTTCCATGTGACCGACAGGGTTTCAACTCGATGCCTTCAACCACGTTCCATGACTATGTCTCCTaGCTGGATAGTGATTTCATC +
Preference number: 4 (lower is better)
Translates to: LLFPCDRQGFNSMPSTTFHDYVS*LDSDFI
Trigger: GATGAAATCACTATCCAGCCAGGAGACATAGTCATG...GAACGTGGTTGAAGGCATCGAGTTGAAACCCTGTCGGTCACATGGAAAGAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381285.8
CDS-3UTR CCA 90 bp GAAGGAACGGCTATAACGGTGCACATGCTGGAAACTTCCATAGACCAGCTCTTCCATGACTATGTCTCCTaGCTGGATAGTGATTTCATC +
Preference number: 4 (lower is better)
Translates to: EGTAITVHMLETSIDQLFHDYVS*LDSDFI
Trigger: GATGAAATCACTATCCAGCCAGGAGACATAGTCATG...GAAGAGCTGGTCTATGGAAGTTTCCAGCATGTGCACCGTTATAGCCGTTCCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000381318.8
CDS-3UTR CCA 90 bp AGACTGTGGATATCGTTGATCGTAACGACCTCAGTGGTGTTGTCTACTGATTTTCCGGGTTCTCCAGTTTaGCTTTCATCCACCCATTCC +
Preference number: 4 (lower is better)
Translates to: RLWISLIVTTSVVLSTDFPGSPV*LSSTHS
Trigger: GGAATGGGTGGATGAAAGCCAAACTGGAGAACCCGG...AAAATCAGTAGACAACACCACTGAGGTCGTTACGATCAACGATATCCACAGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381291.8
CDS-3UTR CCA 90 bp GTTTCACTGGAGCGGGAACCTCATTTTCTGGGATTTTCTCTGCATAGTTTGCAGAGTCACTGGTTTCACTaGAGCGGGAACCTCATTTTC +
Preference number: 4 (lower is better)
Translates to: VSLEREPHFLGFSLHSLQSHWFH*SGNLIF
Trigger: GAAAATGAGGTTCCCGCTCCAGTGAAACCAGTGACT...CTGCAAACTATGCAGAGAAAATCCCAGAAAATGAGGTTCCCGCTCCAGTGAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379960.9
ENST00000419241.1
CDS-3UTR CCA 90 bp CATTGTAATTACCATTTATTGTACATCTACATGCACTGCCCCATGAGATTACAGCACGCAAGGCCAGTTTaGGGGCAGGGGCAGATGTTG +
Preference number: 4 (lower is better)
Translates to: HCNYHLLYIYMHCPMRLQHARPV*GQGQML
Trigger: CAACATCTGCCCCTGCCCCCAAACTGGCCTTGCGTG...CTGTAATCTCATGGGGCAGTGCATGTAGATGTACAATAAATGGTAATTACAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000440794.2
CDS-3UTR CCA 90 bp GGGATTTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAGGAACCAGTTATCCGTTTCTaGTTTCTCATTCGTGCTGGT +
Preference number: 4 (lower is better)
Translates to: GISATLEAIMRPVVRTKEPVIRF*FLIRAG
Trigger: ACCAGCACGAATGAGAAACCAGAAACGGATAACTGG...TTCCTTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAAATCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CCA 90 bp TTACCATTTATTGTACATCTACATGCACTGCCCCATGAGATTACAGATGAAAAAACGGTGAGAGAGGGCTaGGCTGCCCATGCATCCCAG +
Preference number: 4 (lower is better)
Translates to: LPFIVHLHALPHEITDEKTVREG*AAHASQ
Trigger: CTGGGATGCATGGGCAGCCCAGCCCTCTCTCACCGT...TTTTTCATCTGTAATCTCATGGGGCAGTGCATGTAGATGTACAATAAATGGTAA
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000440794.2
CDS-3UTR CCA 90 bp GAATCAGTCACTGGTTTCACTGGAGCGGGAACCTCATTTTCTGGGATTTTCTCTGTTTCACGTAAGACTTaGGGAACCAACCCTTCTGAC +
Preference number: 4 (lower is better)
Translates to: ESVTGFTGAGTSFSGIFSVSRKT*GTNPSD
Trigger: GTCAGAAGGGTTGGTTCCCCAAGTCTTACGTGAAAC...AGAGAAAATCCCAGAAAATGAGGTTCCCGCTCCAGTGAAACCAGTGACTGATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379960.9
CDS-3UTR CCA 90 bp ACCTTCGCTTTAATTGGGCTCATTCTATACGTCTTTAAAACAGAGATACTGAACCCGAAACGACCGGCTTaGCTGCTGGAGAGGCTACTC +
Preference number: 4 (lower is better)
Translates to: TFALIGLILYVFKTEILNPKRPA*LLERLL
Trigger: GAGTAGCCTCTCCAGCAGCCAAGCCGGTCGTTTCGG...GTTCAGTATCTCTGTTTTAAAGACGTATAGAATGAGCCCAATTAAAGCGAAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CCA 90 bp ATACCAAATGGTGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGCCGAAACGACCGGCTTaGCTGCTGGAGAGGCTACTC +
Preference number: 4 (lower is better)
Translates to: IPNGGFLEKEYNFQTACVPKRPA*LLERLL
Trigger: GAGTAGCCTCTCCAGCAGCCAAGCCGGTCGTTTCGG...CACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCACCATTTGGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CCA 90 bp GGAATCAGAACTGAATCCACGCAACAATACACCAGTGTGTTTTCATTGACATATAGGGCGTGCTTCAAGTaGCTGTGGTCCGGGTGGTTT +
Preference number: 4 (lower is better)
Translates to: GIRTESTQQYTSVFSLTYRACFK*LWSGWF
Trigger: AAACCACCCGGACCACAGCCACTTGAAGCACGCCCT...ATATGTCAATGAAAACACACTGGTGTATTGTTGCGTGGATTCAGTTCTGATTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000381318.8
CDS-3UTR CCA 90 bp GACAGACTCCTTGTTGGCAAGGAGCATTTAATTTCTATGAAATATAGCCCAGGTATGCCTGTTGCCCTTTaGGAACGGACCAGGTACGCT +
Preference number: 4 (lower is better)
Translates to: DRLLVGKEHLISMKYSPGMPVAL*ERTRYA
Trigger: AGCGTACCTGGTCCGTTCCCAAAGGGCAACAGGCAT...ACCTGGGCTATATTTCATAGAAATTAAATGCTCCTTGCCAACAAGGAGTCTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CCA 90 bp GGTTCAAGATACACAGGAAGAGCAATTTGTACTGATGTTGCTACTGGTTTAAAGGGCACTGGGAACCCATaGTCACCTCACAGTACGGGT +
Preference number: 4 (lower is better)
Translates to: GSRYTGRAICTDVATGLKGTGNP*SPHSTG
Trigger: ACCCGTACTGTGAGGTGACCATGGGTTCCCAGTGCC...CTTTAAACCAGTAGCAACATCAGTACAAATTGCTCTTCCTGTGTATCTTGAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CCA 90 bp CCAAATGGTGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGGCCATCGTCTTGGTGATGTaGCACTGGGAACCCATGGTC +
Preference number: 4 (lower is better)
Translates to: PNGGFLEKEYNFQTACVAIVLVM*HWEPMV
Trigger: GACCATGGGTTCCCAGTGCCACATCACCAAGACGAT...GGCCACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCACCATTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CCA 90 bp TGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGGCCGTGGGCTGTCCCTGCAGGAGAGATaGGATTCTGAAGCAATGACA +
Preference number: 4 (lower is better)
Translates to: WFLRKGIQFPDSMCGRGLSLQER*DSEAMT
Trigger: TGTCATTGCTTCAGAATCCCATCTCTCCTGCAGGGA...CAGCCCACGGCCACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000381318.8
CDS-3UTR CCA 90 bp TGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGGCCGTGGGCTGCATCCTGGTTCTGTGTaGTCAGTGGCTTTACACTTG +
Preference number: 4 (lower is better)
Translates to: WFLRKGIQFPDSMCGRGLHPGSV*SVALHL
Trigger: CAAGTGTAAAGCCACTGACCACACAGAACCAGGATG...CAGCCCACGGCCACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CCA 90 bp TATGGGATTTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAGATACTAAGCAGCCCCTaGGCCATTCATGGAAGTAAG +
Preference number: 4 (lower is better)
Translates to: YGISATLEAIMRPVVRTKILSSP*AIHGSK
Trigger: CTTACTTCCATGAATGGCCCAGGGGCTGCTTAGTAT...CTTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAAATCCCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CCA 90 bp ATTGTTTCGGGGCAGGGAGGATTGTCGAGAATGATTCCTAGGAGCTTTGAGGGGTGCCATCAAAAGCAATaGCAAAAACCGCAATCACTT +
Preference number: 4 (lower is better)
Translates to: IVSGQGGLSRMIPRSFEGCHQKQ*QKPQSL
Trigger: AAGTGATTGCGGTTTTTGCCATTGCTTTTGATGGCA...CCCCTCAAAGCTCCTAGGAATCATTCTCGACAATCCTCCCTGCCCCGAAACAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CCA 90 bp CTTCTAGAACTTGAGGCTACTTACACAGAGGGATCTTTTCTCTCCTACCATCCCGAACTGCAAACATTTTaGAGCGTCCAGCCCAGGAAA +
Preference number: 4 (lower is better)
Translates to: LLELEATYTEGSFLSYHPELQTF*SVQPRK
Trigger: TTTCCTGGGCTGGACGCTCCAAAATGTTTGCAGTTC...GGGATGGTAGGAGAGAAAAGATCCCTCTGTGTAAGTAGCCTCAAGTTCTAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CCA 90 bp TGTCCTACAACAATCAGGATTCAGCACATTCAAGCACAGAACAGGTCACCAGCACTTCTGATCCTTTTCTaGGAATGCAGACGGGAGGAA +
Preference number: 4 (lower is better)
Translates to: CPTTIRIQHIQAQNRSPALLILF*ECRREE
Trigger: TTCCTCCCGTCTGCATTCCCAGAAAAGGATCAGAAG...TGCTGGTGACCTGTTCTGTGCTTGAATGTGCTGAATCCTGATTGTTGTAGGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CCA 90 bp CATTGTAATTACCATTTATTGTACATCTACATGCACTGCCCCATGAGATTACAGAGGAGGAAGTCAGGCTaGCCTAGCACAGGAGACGGG +
Preference number: 4 (lower is better)
Translates to: HCNYHLLYIYMHCPMRLQRRKSG*PSTGDG
Trigger: CCCGTCTCCTGTGCTAGGCCAGCCTGACTTCCTCCT...CTGTAATCTCATGGGGCAGTGCATGTAGATGTACAATAAATGGTAATTACAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440794.2
CDS-3UTR CCA 90 bp CATTGTAATTACCATTTATTGTACATCTACATGCACTGCCCCATGAGATTACAGGCAAAAGCCTCGAGGTaGAACACTGCAGGGGGTCCG +
Preference number: 4 (lower is better)
Translates to: HCNYHLLYIYMHCPMRLQAKASR*NTAGGP
Trigger: CGGACCCCCTGCAGTGTTCCACCTCGAGGCTTTTGC...CTGTAATCTCATGGGGCAGTGCATGTAGATGTACAATAAATGGTAATTACAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000440794.2
3UTR CAA 72 bp GTTCTCCTCGGTGACAATGAGCTCGTGGATGTATCCTaGTCGCTTTCTTTCAGTTGGGGTCAACATATCCAA +
Preference number: 4 (lower is better)
Translates to: VLLGDNELVDVS*SLSFSWGQHIQ
Trigger: TTGGATATGTTGACCCCAACTGAAAGAAAGCGACAAGGATACATCCACGAGCTCATTGTCACCGAGGAGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381285.8
CDS-3UTR TCA 90 bp TTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAGGAAAACACAAACTATGGAACTGCTaGTCATGCTTCGCTCTTTCC +
Preference number: 4 (lower is better)
Translates to: FSDPRSHNETCSEDKGKHKLWNC*SCFALS
Trigger: GGAAAGAGCGAAGCATGATCAGCAGTTCCATAGTTT...GTGTTTTCCTTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR TCA 90 bp TTTATTGAGAGCTTCCAACTAGTGTTTAAAAGACAAACAGGGCTTCAGCTACAGCTGGTTGCTGTTTCATaGCAGGGGGAAGTGCAGAGG +
Preference number: 4 (lower is better)
Translates to: FIESFQLVFKRQTGLQLQLVAVS*QGEVQR
Trigger: CCTCTGCACTTCCCCCTGTCATGAAACAGCAACCAG...CTGTAGCTGAAGCCCTGTTTGTCTTTTAAACACTAGTTGGAAGCTCTCAATAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR TCA 90 bp CAGGATTCAGCACATTCAAGCACAGAACAGGTCACCAGCAACGACTGCTGCTATTGGTCAATCGACATCTaGTATCTTGAAGTTTCCCTT +
Preference number: 4 (lower is better)
Translates to: QDSAHSSTEQVTSNDCCYWSIDI*YLEVSL
Trigger: AAGGGAAACTTCAAGATATCAGATGTCGATTGACCA...ATAGCAGCAGTCGTTGCTGGTGACCTGTTCTGTGCTTGAATGTGCTGAATCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000381318.8
CDS-3UTR TCA 90 bp GCTTTGAGGGGCCTGTCTTTGCCATCCCATATCCCTGTGACTGAATACCAAATGTGGTCAATCGACATCTaGTATCTTGAAGTTTCCCTT +
Preference number: 4 (lower is better)
Translates to: ALRGLSLPSHIPVTEYQMWSIDI*YLEVSL
Trigger: AAGGGAAACTTCAAGATATCAGATGTCGATTGACCA...CATTTGGTATTCAGTCACAGGGATATGGGATGGCAAAGACAGGCCCCTCAAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR TCA 90 bp CCAACTCAACCAGATAAATCTGAGACCGAACAAAAACACAGAGTGCTTTCTCATGGCAGGGGCAGATGTTaGATCAGTCACTGGTTTCAC +
Preference number: 4 (lower is better)
Translates to: PTQPDKSETEQKHRVLSHGRGRC*ISHWFH
Trigger: GTGAAACCAGTGACTGATTCAACATCTGCCCCTGCC...ATGAGAAAGCACTCTGTGTTTTTGTTCGGTCTCAGATTTATCTGGTTGAGTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR TCA 90 bp TGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGGCCGTGGGCTGTTATGGGCCCTGAAATaGGTTTCACGTAAGACTTGG +
Preference number: 4 (lower is better)
Translates to: WFLRKGIQFPDSMCGRGLLWALK*VSRKTW
Trigger: CCAAGTCTTACGTGAAACTCATTTCAGGGCCCATAA...CAGCCCACGGCCACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381318.8
ENST00000399367.7
CDS-3UTR TCA 90 bp TATGGGATTTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAGAGTTCCAGAGCCCTCTaGATCTTTAAGCCTCACATA +
Preference number: 4 (lower is better)
Translates to: YGISATLEAIMRPVVRTKSSRAL*IFKPHI
Trigger: TATGTGAGGCTTAAAGATTCAGAGGGCTCTGGAACT...CTTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAAATCCCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR TCA 90 bp ATTGTTTCGGGGCAGGGAGGATTGTCGAGAATGATTCCTAGGAGCTTTGAGGGGAACAGGAGGGTTACATaGGTTCTCCAAAAATATAGA +
Preference number: 4 (lower is better)
Translates to: IVSGQGGLSRMIPRSFEGNRRVT*VLQKYR
Trigger: TCTATATTTTTGGAGAACTCATGTAACCCTCCTGTT...CCCCTCAAAGCTCCTAGGAATCATTCTCGACAATCCTCCCTGCCCCGAAACAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000381318.8
CDS-3UTR TCA 90 bp CAGGATTCAGCACATTCAAGCACAGAACAGGTCACCAGCAACGACTGCTGCTATGCAAAGGACATTTCATaGCCACAACAAACTAGGATT +
Preference number: 4 (lower is better)
Translates to: QDSAHSSTEQVTSNDCCYAKDIS*PQQTRI
Trigger: AATCCTAGTTTGTTGTGGTCATGAAATGTCCTTTGC...ATAGCAGCAGTCGTTGCTGGTGACCTGTTCTGTGCTTGAATGTGCTGAATCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR TCA 90 bp AGCTGCTGCGTCCCACCAACAAAAATTCCCTTCCACCTAAAATTCCAGAAGTCAAAATTGCTTGAAGTATaGCCGGGCTCTCATGGGAAA +
Preference number: 4 (lower is better)
Translates to: SCCVPPTKIPFHLKFQKSKLLEV*PGSHGK
Trigger: TTTCCCATGAGAGCCCGGTCATACTTCAAGCAATTT...TGACTTCTGGAATTTTAGGTGGAAGGGAATTTTTGTTGGTGGGACGCAGCAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR TCA 90 bp GCTTTGAGGGGCCTGTCTTTGCCATCCCATATCCCTGTGACTGAATACCAAATGCATACGCTACCTACATaGACAATGATGTCCAACATT +
Preference number: 4 (lower is better)
Translates to: ALRGLSLPSHIPVTEYQMHTLPT*TMMSNI
Trigger: AATGTTGGACATCATTGTTCATGTAGGTAGCGTATG...CATTTGGTATTCAGTCACAGGGATATGGGATGGCAAAGACAGGCCCCTCAAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR TCA 90 bp ATACCAAATGGTGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGCCTGGTTCCAGGAGATaGTGCTGTCCATCCACCTGC +
Preference number: 4 (lower is better)
Translates to: IPNGGFLEKEYNFQTACVPGSRR*CCPSTC
Trigger: GCAGGTGGATGGACAGCATCATCTCCTGGAACCAGG...CACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCACCATTTGGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR TCA 90 bp CTTCTAGAACTTGAGGCTACTTACACAGAGGGATCTTTTCTCTCCTACCATCCCATGCCTCCTCTTACATaGATGTTCTTTGGGAGCAGA +
Preference number: 4 (lower is better)
Translates to: LLELEATYTEGSFLSYHPMPPLT*MFFGSR
Trigger: TCTGCTCCCAAAGAACATTCATGTAAGAGGAGGCAT...GGGATGGTAGGAGAGAAAAGATCCCTCTGTGTAAGTAGCCTCAAGTTCTAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR TCA 90 bp CTATGGGATTTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAATTTGAATGGAGGAACTaGTTGAGGCTGCATGGAACT +
Preference number: 4 (lower is better)
Translates to: LWDFSDPRSHNETCSEDKFEWRN*LRLHGT
Trigger: AGTTCCATGCAGCCTCAATCAGTTCCTCCATTCAAA...TTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAAATCCCATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR TCA 90 bp TTGTTTCATGAAACAGGAAATTGTTTCGGGGCAGGGAGGATTGTCGAGAATGATTCCTCTCATCCTTCCTaGCACAAGTACCCTCTCAGA +
Preference number: 4 (lower is better)
Translates to: LFHETGNCFGAGRIVENDSSHPS*HKYPLR
Trigger: TCTGAGAGGGTACTTGTGTCAGGAAGGATGAGAGGA...ATCATTCTCGACAATCCTCCCTGCCCCGAAACAATTTCCTGTTTCATGAAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR TCA 90 bp TTGTTTCATGAAACAGGAAATTGTTTCGGGGCAGGGAGGATTGTCGAGAATGATAGCTTCCCATACTCCTaGAGTCAGCAGCTTTACTGG +
Preference number: 4 (lower is better)
Translates to: LFHETGNCFGAGRIVENDSFPYS*SQQLYW
Trigger: CCAGTAAAGCTGCTGACTTCAGGAGTATGGGAAGCT...ATCATTCTCGACAATCCTCCCTGCCCCGAAACAATTTCCTGTTTCATGAAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR GCA 90 bp TATGGGATTTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAGGAAATAGCAACTGGTTaGTGTTTCATGACAGGGGGA +
Preference number: 4 (lower is better)
Translates to: YGISATLEAIMRPVVRTKEIATG*CFMTGG
Trigger: TCCCCCTGTCATGAAACAGCAACCAGTTGCTATTTC...CTTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAAATCCCATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR GCA 90 bp TACATCCCAGGGTTCAAATGTGAACATGCTCCTTCTTCTCCCCAGCACTATCTTGAAATAGCAACTGGTTaGTGTTTCATGACAGGGGGA +
Preference number: 4 (lower is better)
Translates to: YIPGFKCEHAPSSPQHYLEIATG*CFMTGG
Trigger: TCCCCCTGTCATGAAACAGCAACCAGTTGCTATTTC...AAGATAGTGCTGGGGAGAAGAAGGAGCATGTTCACATTTGAACCCTGGGATGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000456489.1
CDS-3UTR GCA 90 bp TTGTTTCATGAAACAGGAAATTGTTTCGGGGCAGGGAGGATTGTCGAGAATGATCTTTGGCAATGTGGCTaGAGGATGAGCAAATGCAGG +
Preference number: 4 (lower is better)
Translates to: LFHETGNCFGAGRIVENDLWQCG*RMSKCR
Trigger: CCTGCATTTGCTCATCCTGCAGCCACATTGCCAAAG...ATCATTCTCGACAATCCTCCCTGCCCCGAAACAATTTCCTGTTTCATGAAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR GCA 90 bp GATAAATCTGAGACCGAACAAAAACACAGAGTGCTTTCTCATGTGGCTACAAGGCTTTGGCAATGTGGCTaGAGGATGAGCAAATGCAGG +
Preference number: 4 (lower is better)
Translates to: DKSETEQKHRVLSHVATRLWQCG*RMSKCR
Trigger: CCTGCATTTGCTCATCCTGCAGCCACATTGCCAAAG...CCTTGTAGCCACATGAGAAAGCACTCTGTGTTTTTGTTCGGTCTCAGATTTATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR GCA 90 bp GGGATTTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAGGAAGCTACATCAATGAGGTaGATTGCCAGGATAAATTCC +
Preference number: 4 (lower is better)
Translates to: GISATLEAIMRPVVRTKEATSMR*IARINS
Trigger: GGAATTTATCCTGGCAATGCACCTCATTGATGTAGC...TTCCTTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAAATCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR GCA 90 bp GATAAATCTGAGACCGAACAAAAACACAGAGTGCTTTCTCATGTGGCTACAAGGTCTCCAGTTCCAGGTTaGCACGTTCAAAGTTCTCCC +
Preference number: 4 (lower is better)
Translates to: DKSETEQKHRVLSHVATRSPVPG*HVQSSP
Trigger: GGGAGAACTTTGAACGTGGCAACCTGGAACTGGAGA...CCTTGTAGCCACATGAGAAAGCACTCTGTGTTTTTGTTCGGTCTCAGATTTATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR GCA 90 bp CAACCAGATAAATCTGAGACCGAACAAAAACACAGAGTGCTTTCTCATGTGGCTTCTCCAGTTCCAGGTTaGCACGTTCAAAGTTCTCCC +
Preference number: 4 (lower is better)
Translates to: QPDKSETEQKHRVLSHVASPVPG*HVQSSP
Trigger: GGGAGAACTTTGAACGTGGCAACCTGGAACTGGAGA...AGCCACATGAGAAAGCACTCTGTGTTTTTGTTCGGTCTCAGATTTATCTGGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR GCA 90 bp TTGTTTCATGAAACAGGAAATTGTTTCGGGGCAGGGAGGATTGTCGAGAATGATTGTTCCAGGAGAGCTTaGCTTCGTTTCTCCAGTTCC +
Preference number: 4 (lower is better)
Translates to: LFHETGNCFGAGRIVENDCSRRA*LRFSSS
Trigger: GGAACTGGAGAAACGAAGGCAAGCTCTCCTGGAACA...ATCATTCTCGACAATCCTCCCTGCCCCGAAACAATTTCCTGTTTCATGAAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR GCA 90 bp ACCTTCGCTTTAATTGGGCTCATTCTATACGTCTTTAAAACAGAGATACTGAACTCCTGCTCCTTGCGCTaGTGTTCCAGGAGAGCTTGC +
Preference number: 4 (lower is better)
Translates to: TFALIGLILYVFKTEILNSCSLR*CSRRAC
Trigger: GCAAGCTCTCCTGGAACAGCAGCGCAAGGAGCAGGA...GTTCAGTATCTCTGTTTTAAAGACGTATAGAATGAGCCCAATTAAAGCGAAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR GCA 90 bp ACCTTCGCTTTAATTGGGCTCATTCTATACGTCTTTAAAACAGAGATACTGAACTGTCTTTTGCGCTCTTaGTCCTGGCGCTCACGCTCC +
Preference number: 4 (lower is better)
Translates to: TFALIGLILYVFKTEILNCLLRS*SWRSRS
Trigger: GGAGCGTGAGCGCCAGGAGCAAGAGCGCAAAAGACA...GTTCAGTATCTCTGTTTTAAAGACGTATAGAATGAGCCCAATTAAAGCGAAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR GCA 90 bp TGCAATATGATTAGAGCATCGTACAAGGTAATAGCTTTGCCATGGAAAGAACTATGTCTTTTGCGCTCTTaGTCCTGGCGCTCACGCTCC +
Preference number: 4 (lower is better)
Translates to: CNMIRASYKVIALPWKELCLLRS*SWRSRS
Trigger: GGAGCGTGAGCGCCAGGAGCAAGAGCGCAAAAGACA...TAGTTCTTTCCATGGCAAAGCTATTACCTTGTACGATGCTCTAATCATATTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR GCA 90 bp GTTTCTAAACTCACACCAAGGACTGGGCATTGTAGGCCAAGAAGTCTACTTGGGCACTCAAGTTGTCGTTaGCTTTCAAGTTCCCGTTTT +
Preference number: 4 (lower is better)
Translates to: VSKLTPRTGHCRPRSLLGHSSCR*LSSSRF
Trigger: AAAACGGGAACTTGAAAGGCAACGACAACTTGAGTG...CCCAAGTAGACTTCTTGGCCTACAATGCCCAGTCCTTGGTGTGAGTTTAGAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000381318.8
CDS-3UTR GCA 90 bp CTATGGGATTTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAGTGCTCTCAATTTCTTaGCTTTGGGTGGTCAATCGA +
Preference number: 4 (lower is better)
Translates to: LWDFSDPRSHNETCSEDKVLSIS*LWVVNR
Trigger: TCGATTGACCACCCAAAGGCAAGAAATTGAGAGCAC...TTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAAATCCCATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR GCA 90 bp AGACTGTGGATATCGTTGATCGTAACGACCTCAGTGGTGTTGTCTACTGATTTTTGGTCTCGTAGGTGCTaGCGAGCTAGTTCTTTTGCT +
Preference number: 4 (lower is better)
Translates to: RLWISLIVTTSVVLSTDFWSRRC*RASSFA
Trigger: AGCAAAAGAACTAGCTCGGCAGCACCTACGAGACCA...AAAATCAGTAGACAACACCACTGAGGTCGTTACGATCAACGATATCCACAGTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR GCA 90 bp GATAAATCTGAGACCGAACAAAAACACAGAGTGCTTTCTCATGTGGCTACAAGGTGGTCTCGTAGGTGCTaGCGAGCTAGTTCTTTTGCT +
Preference number: 4 (lower is better)
Translates to: DKSETEQKHRVLSHVATRWSRRC*RASSFA
Trigger: AGCAAAAGAACTAGCTCGGCAGCACCTACGAGACCA...CCTTGTAGCCACATGAGAAAGCACTCTGTGTTTTTGTTCGGTCTCAGATTTATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR GCA 90 bp CCAAATGGTGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGGCCTGGTCTCGTAGGTGCTaGCGAGCTAGTTCTTTTGCT +
Preference number: 4 (lower is better)
Translates to: PNGGFLEKEYNFQTACVAWSRRC*RASSFA
Trigger: AGCAAAAGAACTAGCTCGGCAGCACCTACGAGACCA...GGCCACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCACCATTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR GCA 90 bp TGGGCTGCCCATGCATCCCAGTTATCCGTTTCTGGTTTCTCATTCGTGCTGGTGTGCTTCTGGAGTTGTTaGTTATTGTGTATTTCTCTT +
Preference number: 4 (lower is better)
Translates to: WAAHASQLSVSGFSFVLVCFWSC*LLCISL
Trigger: AAGAGAAATACACAATAAGCAACAACTCCAGAAGCA...CACCAGCACGAATGAGAAACCAGAAACGGATAACTGGGATGCATGGGCAGCCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379960.9
CDS-3UTR GCA 90 bp TATGGGATTTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAGGCCTCCATGGACTTTTaGTTCTGGAGTTGTTGCTTA +
Preference number: 4 (lower is better)
Translates to: YGISATLEAIMRPVVRTKASMDF*FWSCCL
Trigger: TAAGCAACAACTCCAGAAGCAAAAGTCCATGGAGGC...CTTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAAATCCCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR GCA 90 bp GTTTCACTGGAGCGGGAACCTCATTTTCTGGGATTTTCTCTGCATAGTTTGCAGTTCAAAGGGGTACAGTaGCCGGTAATACACCACTTT +
Preference number: 4 (lower is better)
Translates to: VSLEREPHFLGFSLHSLQFKGVQ*PVIHHF
Trigger: AAAGTGGTGTATTACCGGGCACTGTACCCCTTTGAA...CTGCAAACTATGCAGAGAAAATCCCAGAAAATGAGGTTCCCGCTCCAGTGAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379960.9
ENST00000419241.1
CDS-3UTR GCA 90 bp TGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGGCCGTGGGCTGTTCAAAGGGGTACAGTaGCCGGTAATACACCACTTT +
Preference number: 4 (lower is better)
Translates to: WFLRKGIQFPDSMCGRGLFKGVQ*PVIHHF
Trigger: AAAGTGGTGTATTACCGGGCACTGTACCCCTTTGAA...CAGCCCACGGCCACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR GCA 90 bp GGTGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGGCCGTGGGCTTCTGGGATTTTCTCTaGATAGTTTGCAGGGAACCA +
Preference number: 4 (lower is better)
Translates to: GGFLEKEYNFQTACVAVGFWDFL*IVCREP
Trigger: TGGTTCCCTGCAAACTATGCAGAGAAAATCCCAGAA...GCCCACGGCCACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR GCA 90 bp TGCAATATGATTAGAGCATCGTACAAGGTAATAGCTTTGCCATGGAAAGAACTAGGGCTGGGCTGCCCATaGATCCCAGTTATCCGTTTC +
Preference number: 4 (lower is better)
Translates to: CNMIRASYKVIALPWKELGLGCP*IPVIRF
Trigger: GAAACGGATAACTGGGATGCATGGGCAGCCCAGCCC...TAGTTCTTTCCATGGCAAAGCTATTACCTTGTACGATGCTCTAATCATATTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR GCA 90 bp ATACCAAATGGTGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGGGGCTGGGCTGCCCATaGATCCCAGTTATCCGTTTC +
Preference number: 4 (lower is better)
Translates to: IPNGGFLEKEYNFQTACVGLGCP*IPVIRF
Trigger: GAAACGGATAACTGGGATGCATGGGCAGCCCAGCCC...CACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCACCATTTGGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR GCA 90 bp CATTGTAATTACCATTTATTGTACATCTACATGCACTGCCCCATGAGATTACAGGGGCTGGGCTGCCCATaGATCCCAGTTATCCGTTTC +
Preference number: 4 (lower is better)
Translates to: HCNYHLLYIYMHCPMRLQGLGCP*IPVIRF
Trigger: GAAACGGATAACTGGGATGCATGGGCAGCCCAGCCC...CTGTAATCTCATGGGGCAGTGCATGTAGATGTACAATAAATGGTAATTACAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440794.2
CDS-3UTR GCA 90 bp ACCTTCGCTTTAATTGGGCTCATTCTATACGTCTTTAAAACAGAGATACTGAACAACGACCGGCTTGGCTaGTGGAGAGGCTACTCGCTT +
Preference number: 4 (lower is better)
Translates to: TFALIGLILYVFKTEILNNDRLG*WRGYSL
Trigger: AAGCGAGTAGCCTCTCCAGCAGCCAAGCCGGTCGTT...GTTCAGTATCTCTGTTTTAAAGACGTATAGAATGAGCCCAATTAAAGCGAAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR GCA 90 bp AGACTGTGGATATCGTTGATCGTAACGACCTCAGTGGTGTTGTCTACTGATTTTTTTTTCCCACGTGCTTaGAGCTCTCCTTCCCACCAT +
Preference number: 4 (lower is better)
Translates to: RLWISLIVTTSVVLSTDFFFPRA*SSPSHH
Trigger: ATGGTGGGAAGGAGAGCTGCAAGCACGTGGGAAAAA...AAAATCAGTAGACAACACCACTGAGGTCGTTACGATCAACGATATCCACAGTCT
46% GC, longest homopolymer 9 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR GCA 90 bp TTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAGGAAAACACACACCGAGGATCCATTaGCAATCTTTTGACGAACTC +
Preference number: 4 (lower is better)
Translates to: FSDPRSHNETCSEDKGKHTPRIH*QSFDEL
Trigger: GAGTTCGTCAAAAGATTGGCAATGGATCCTCGGTGT...GTGTTTTCCTTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR GCA 90 bp ACGCTATTAATGAAATGCCCCTGGAGAACACTTGCAGAACTTCCCGTAGTCCGGCAGTCCTTTCATTTATaGTTTCTGCTCGGAGAGTAT +
Preference number: 4 (lower is better)
Translates to: TLLMKCPWRTLAELPVVRQSFHL*FLLGEY
Trigger: ATACTCTCCGAGCAGAAAGCATAAATGAAAGGACTG...CCGGACTACGGGAAGTTCTGCAAGTGTTCTCCAGGGGCATTTCATTAATAGCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR GCA 90 bp GGTTCAAGATACACAGGAAGAGCAATTTGTACTGATGTTGCTACTGGTTTAAAGCCCGTGGGGACTTCGTaGAGCAGAAGACACTTCGTA +
Preference number: 4 (lower is better)
Translates to: GSRYTGRAICTDVATGLKPVGTS*SRRHFV
Trigger: TACGAAGTGTCTTCTGCTGCACGAAGTCCCCACGGG...CTTTAAACCAGTAGCAACATCAGTACAAATTGCTCTTCCTGTGTATCTTGAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR GCA 90 bp TTGTTTCATGAAACAGGAAATTGTTTCGGGGCAGGGAGGATTGTCGAGAATGATCCAGGATGTGGACTCTaGCTTCTAGAGAACTGCTCT +
Preference number: 4 (lower is better)
Translates to: LFHETGNCFGAGRIVENDPGCGL*LLENCS
Trigger: AGAGCAGTTCTCTAGAAGGCAGAGTCCACATCCTGG...ATCATTCTCGACAATCCTCCCTGCCCCGAAACAATTTCCTGTTTCATGAAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR GCA 90 bp CAGGATTCAGCACATTCAAGCACAGAACAGGTCACCAGCAACGACTGCTGCTATACCAATAACTCCTTCTaGGATCTACACAAGAGCAAT +
Preference number: 4 (lower is better)
Translates to: QDSAHSSTEQVTSNDCCYTNNSF*DLHKSN
Trigger: ATTGCTCTTGTGTAGATCGCAGAAGGAGTTATTGGT...ATAGCAGCAGTCGTTGCTGGTGACCTGTTCTGTGCTTGAATGTGCTGAATCCTG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR GCA 90 bp GGGATTTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAGGAAACGCTATTAATGAAATaGCCCTGGAGAACACTTGCA +
Preference number: 4 (lower is better)
Translates to: GISATLEAIMRPVVRTKETLLMK*PWRTLA
Trigger: TGCAAGTGTTCTCCAGGGGCATTTCATTAATAGCGT...TTCCTTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAAATCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR GCA 90 bp CAACCAGATAAATCTGAGACCGAACAAAAACACAGAGTGCTTTCTCATGTGGCTCTGCCCCATTTTCTGTaGTGTGAGCAGCAGGCATTT +
Preference number: 4 (lower is better)
Translates to: QPDKSETEQKHRVLSHVALPHFL*CEQQAF
Trigger: AAATGCCTGCTGCTCACAGCACAGAAAATGGGGCAG...AGCCACATGAGAAAGCACTCTGTGTTTTTGTTCGGTCTCAGATTTATCTGGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CCA 90 bp GACCGACAGGGTTTCAACTCGATGCCTTCAACCACGTTCACCATCAACCTTCCATTGGAAACTGAGCCATaGTTCTGTTACTTTTACCTT +
Preference number: 4 (lower is better)
Translates to: DRQGFNSMPSTTFTINLPLETEP*FCYFYL
Trigger: AAGGTAAAAGTAACAGAACCATGGCTCAGTTTCCAA...TGGAAGGTTGATGGTGAACGTGGTTGAAGGCATCGAGTTGAAACCCTGTCGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381285.8
CDS-3UTR CCA 90 bp GGTGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGGCCGTGGGCGCTAGAAATAGCAACTaGTTGCTGTTTCATGACAGG +
Preference number: 4 (lower is better)
Translates to: GGFLEKEYNFQTACVAVGARNSN*LLFHDR
Trigger: CCTGTCATGAAACAGCAACCAGTTGCTATTTCTAGC...GCCCACGGCCACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CCA 90 bp CTTCTAGAACTTGAGGCTACTTACACAGAGGGATCTTTTCTCTCCTACCATCCCAGACATTCCAACAACTaGAATGGATCCCATTGGCAC +
Preference number: 4 (lower is better)
Translates to: LLELEATYTEGSFLSYHPRHSNN*NGSHWH
Trigger: GTGCCAATGGGATCCATTCCAGTTGTTGGAATGTCT...GGGATGGTAGGAGAGAAAAGATCCCTCTGTGTAAGTAGCCTCAAGTTCTAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CCA 90 bp GGTTCAAGATACACAGGAAGAGCAATTTGTACTGATGTTGCTACTGGTTTAAAGGGGGCACAGCTGCTGTaGGAACAGAAGATACTAGGG +
Preference number: 4 (lower is better)
Translates to: GSRYTGRAICTDVATGLKGAQLL*EQKILG
Trigger: CCCTAGTATCTTCTGTTCCCACAGCAGCTGTGCCCC...CTTTAAACCAGTAGCAACATCAGTACAAATTGCTCTTCCTGTGTATCTTGAACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CCA 90 bp TTTATTGAGAGCTTCCAACTAGTGTTTAAAAGACAAACAGGGCTTCAGCTACAGGGGGCACAGCTGCTGTaGGAACAGAAGATACTAGGG +
Preference number: 4 (lower is better)
Translates to: FIESFQLVFKRQTGLQLQGAQLL*EQKILG
Trigger: CCCTAGTATCTTCTGTTCCCACAGCAGCTGTGCCCC...CTGTAGCTGAAGCCCTGTTTGTCTTTTAAACACTAGTTGGAAGCTCTCAATAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CCA 90 bp CTATGGGATTTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAAACTCTTTGGCAATGTaGCTGCAGGATGAGCAAATG +
Preference number: 4 (lower is better)
Translates to: LWDFSDPRSHNETCSEDKNSLAM*LQDEQM
Trigger: CATTTGCTCATCCTGCAGCCACATTGCCAAAGAGTT...TTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAAATCCCATAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CCA 90 bp TTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAGGAAAACACAACTCTTTGGCAATGTaGCTGCAGGATGAGCAAATG +
Preference number: 4 (lower is better)
Translates to: FSDPRSHNETCSEDKGKHNSLAM*LQDEQM
Trigger: CATTTGCTCATCCTGCAGCCACATTGCCAAAGAGTT...GTGTTTTCCTTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CCA 90 bp GGGATTTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAGGAAAGAATAGTTCTTGCTTaGGGACCTGTTAAGTGTCCA +
Preference number: 4 (lower is better)
Translates to: GISATLEAIMRPVVRTKERIVLA*GPVKCP
Trigger: TGGACACTTAACAGGTCCCCAAGCAAGAACTATTCT...TTCCTTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAAATCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CCA 90 bp GGAACGGACCAGGTACGCTTTCTCGCGCTTCTTTTTCTCAGTCTCTATGTAGAGAATTGTTGCTGTAGATaGGTGATTTCGGCAATTCTC +
Preference number: 4 (lower is better)
Translates to: GTDQVRFLALLFLSLYVENCCCR*VISAIL
Trigger: GAGAATTGCCGAAATCACCCATCTACAGCAACAATT...CTCTACATAGAGACTGAGAAAAAGAAGCGCGAGAAAGCGTACCTGGTCCGTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381285.8
CDS-3UTR CCA 90 bp AAAAGGAATACAATTTCCAGACAGCATGTGTGGCCGTGGGCTGGGACCCTGCTGGAGTATCTGTTTTTCTaGAATAAGTCTTCCAAGCAT +
Preference number: 4 (lower is better)
Translates to: KRNTISRQHVWPWAGTLLEYLFF*NKSSKH
Trigger: ATGCTTGGAAGACTTATTCCAGAAAAACAGATACTC...CAGCAGGGTCCCAGCCCACGGCCACACATGCTGTCTGGAAATTGTATTCCTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CCA 90 bp AAAAATCTCTGTGACCAGCTGCAGGTCATTCACATAGTTCTCCTCGGTGACAATGTCGTTCAGCCTCCATaGACTTTTGCTTCTGGAGTT +
Preference number: 4 (lower is better)
Translates to: KNLCDQLQVIHIVLLGDNVVQPP*TFASGV
Trigger: AACTCCAGAAGCAAAAGTCCATGGAGGCTGAACGAC...ATTGTCACCGAGGAGAACTATGTGAATGACCTGCAGCTGGTCACAGAGATTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381285.8
CDS-3UTR CCA 90 bp ATACCAAATGGTGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGGGGTGCCTGGACAGCTaGCTTAGCTGGTTCTTGGTG +
Preference number: 4 (lower is better)
Translates to: IPNGGFLEKEYNFQTACVGCLDS*LSWFLV
Trigger: CACCAAGAACCAGCTAAGCCAGCTGTCCAGGCACCC...CACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCACCATTTGGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CCA 90 bp ATCAGTCACTGGTTTCACTGGAGCGGGAACCTCATTTTCTGGGATTTTCTCTGCTGCAGAAATGGTAAGTaGACCTTTTTCTGCAGTGGA +
Preference number: 4 (lower is better)
Translates to: ISHWFHWSGNLIFWDFLCCRNGK*TFFCSG
Trigger: TCCACTGCAGAAAAAGGTCCACTTACCATTTCTGCA...GCAGAGAAAATCCCAGAAAATGAGGTTCCCGCTCCAGTGAAACCAGTGACTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000379960.9
ENST00000419241.1
CDS-3UTR CCA 90 bp ACCGACAGGGTTTCAACTCGATGCCTTCAACCACGTTCACCATCAACCTTCCAAATAGTGATTTCATCATaGCTTCTGGATTCAAAGGGG +
Preference number: 4 (lower is better)
Translates to: TDRVSTRCLQPRSPSTFQIVISS*LLDSKG
Trigger: CCCCTTTGAATCCAGAAGCCATGATGAAATCACTAT...TTGGAAGGTTGATGGTGAACGTGGTTGAAGGCATCGAGTTGAAACCCTGTCGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381285.8
CDS-3UTR CCA 90 bp GGGATTTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAGGAAACTATGTCTCCTGGCTaGATAGTGATTTCATCATGG +
Preference number: 4 (lower is better)
Translates to: GISATLEAIMRPVVRTKETMSPG*IVISSW
Trigger: CCATGATGAAATCACTATCCAGCCAGGAGACATAGT...TTCCTTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAAATCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CCA 90 bp GGAACGGACCAGGTACGCTTTCTCGCGCTTCTTTTTCTCAGTCTCTATGTAGAGGGGAACCTCATTTTCTaGGATTTTCTCTGCATAGTT +
Preference number: 4 (lower is better)
Translates to: GTDQVRFLALLFLSLYVEGNLIF*DFLCIV
Trigger: AACTATGCAGAGAAAATCCCAGAAAATGAGGTTCCC...CTCTACATAGAGACTGAGAAAAAGAAGCGCGAGAAAGCGTACCTGGTCCGTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000381285.8
CDS-3UTR CCA 90 bp ATACCAAATGGTGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGGACCTCTGCCTTAACTaGCCGGCACTTGGAACGGTG +
Preference number: 4 (lower is better)
Translates to: IPNGGFLEKEYNFQTACVDLCLN*PALGTV
Trigger: CACCGTTCCAAGTGCCGGCCAGTTAAGGCAGAGGTC...CACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCACCATTTGGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CCA 90 bp CATTGTAATTACCATTTATTGTACATCTACATGCACTGCCCCATGAGATTACAGGACCTCTGCCTTAACTaGCCGGCACTTGGAACGGTG +
Preference number: 4 (lower is better)
Translates to: HCNYHLLYIYMHCPMRLQDLCLN*PALGTV
Trigger: CACCGTTCCAAGTGCCGGCCAGTTAAGGCAGAGGTC...CTGTAATCTCATGGGGCAGTGCATGTAGATGTACAATAAATGGTAATTACAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440794.2
CDS-3UTR CCA 90 bp ATCCCTGAATATCAGGTGCAAATCATGGCAGGGCAAATTTCTTTCTTTTTATTTCCGAAACGACCGGCTTaGCTGCTGGAGAGGCTACTC +
Preference number: 4 (lower is better)
Translates to: IPEYQVQIMAGQISFFLFPKRPA*LLERLL
Trigger: GAGTAGCCTCTCCAGCAGCCAAGCCGGTCGTTTCGG...AAATAAAAAGAAAGAAATTTGCCCTGCCATGATTTGCACCTGATATTCAGGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437126.5
CDS-3UTR CCA 90 bp CTATGGGATTTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAGTGACAATGAGCTCGTaGATGTATCCTTGTCGCTTT +
Preference number: 4 (lower is better)
Translates to: LWDFSDPRSHNETCSEDKVTMSS*MYPCRF
Trigger: AAAGCGACAAGGATACATCCACGAGCTCATTGTCAC...TTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAAATCCCATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CCA 90 bp AAAAATCTCTGTGACCAGCTGCAGGTCATTCACATAGTTCTCCTCGGTGACAATTCCCTGCAGGAGAGATaGGATTCTGAAGCAATGACA +
Preference number: 4 (lower is better)
Translates to: KNLCDQLQVIHIVLLGDNSLQER*DSEAMT
Trigger: TGTCATTGCTTCAGAATCCCATCTCTCCTGCAGGGA...ATTGTCACCGAGGAGAACTATGTGAATGACCTGCAGCTGGTCACAGAGATTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381285.8
CDS-3UTR CCA 90 bp TATGGGATTTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAGATAGGACACTATGAGTaGGTGACCTGGGACCTAAAA +
Preference number: 4 (lower is better)
Translates to: YGISATLEAIMRPVVRTKIGHYE*VTWDLK
Trigger: TTTTAGGTCCCAGGTCACCCACTCATAGTGTCCTAT...CTTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAAATCCCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CCA 90 bp CCAAATGGTGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGGCCTGGTCACAGCAAACCTaGTTCCAGGAGATGATGCTG +
Preference number: 4 (lower is better)
Translates to: PNGGFLEKEYNFQTACVAWSQQT*FQEMML
Trigger: CAGCATCATCTCCTGGAACCAGGTTTGCTGTGACCA...GGCCACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCACCATTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CCA 90 bp AAAAGGAATACAATTTCCAGACAGCATGTGTGGCCGTGGGCTGGGACCCTGCTGGCTTATACAAGGTACTaGCCTACTCTAAAATATACT +
Preference number: 4 (lower is better)
Translates to: KRNTISRQHVWPWAGTLLAYTRY*PTLKYT
Trigger: AGTATATTTTAGAGTAGGCCAGTACCTTGTATAAGC...CAGCAGGGTCCCAGCCCACGGCCACACATGCTGTCTGGAAATTGTATTCCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CCA 90 bp TATGGGATTTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAGAGAAACACAAGCATTTaGTCTCACTGGTCCACTCCA +
Preference number: 4 (lower is better)
Translates to: YGISATLEAIMRPVVRTKRNTSI*SHWSTP
Trigger: TGGAGTGGACCAGTGAGACCAAATGCTTGTGTTTCT...CTTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAAATCCCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CCA 90 bp CCAAATGGTGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGGCCTACCATCCCCATACATaGGATCCTAAGGGGAGAGTC +
Preference number: 4 (lower is better)
Translates to: PNGGFLEKEYNFQTACVAYHPHT*DPKGRV
Trigger: GACTCTCCCCTTAGGATCCCATGTATGGGGATGGTA...GGCCACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCACCATTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CCA 90 bp GGGATTTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAGGAAATTGCTCAATGTATATaGAGATGGGGACCTACTTGC +
Preference number: 4 (lower is better)
Translates to: GISATLEAIMRPVVRTKEIAQCI*RWGPTC
Trigger: GCAAGTAGGTCCCCATCTCCATATACATTGAGCAAT...TTCCTTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAAATCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CCA 90 bp GAAGGAACGGCTATAACGGTGCACATGCTGGAAACTTCCATAGACCAGCTCTTCTTAATGAAATGCCCCTaGAGAACACTTGCAGAACTT +
Preference number: 4 (lower is better)
Translates to: EGTAITVHMLETSIDQLFLMKCP*RTLAEL
Trigger: AAGTTCTGCAAGTGTTCTCCAGGGGCATTTCATTAA...GAAGAGCTGGTCTATGGAAGTTTCCAGCATGTGCACCGTTATAGCCGTTCCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CCA 90 bp CTTCTAGAACTTGAGGCTACTTACACAGAGGGATCTTTTCTCTCCTACCATCCCCAGTTCAAAGATACTTaGGCTATTGGCCATGTAGGC +
Preference number: 4 (lower is better)
Translates to: LLELEATYTEGSFLSYHPQFKDT*AIGHVG
Trigger: GCCTACATGGCCAATAGCCCAAGTATCTTTGAACTG...GGGATGGTAGGAGAGAAAAGATCCCTCTGTGTAAGTAGCCTCAAGTTCTAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CCA 90 bp TTACCATTTATTGTACATCTACATGCACTGCCCCATGAGATTACAGATGAAAAAATCCGGGGCTGCATGTaGCCTAGTCTCATGGAGGGG +
Preference number: 4 (lower is better)
Translates to: LPFIVHLHALPHEITDEKIRGCM*PSLMEG
Trigger: CCCCTCCATGAGACTAGGCCACATGCAGCCCCGGAT...TTTTTCATCTGTAATCTCATGGGGCAGTGCATGTAGATGTACAATAAATGGTAA
46% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000440794.2
CDS-3UTR CCA 90 bp CTGCATCTCTGCTTTCATTTTGATTACTTTACATCCCAGGGTTCAAATGTGAACTCCTTTTCCCCTGACTaGCGGCCTGCATCTCTGCTT +
Preference number: 4 (lower is better)
Translates to: LHLCFHFDYFTSQGSNVNSFSPD*RPASLL
Trigger: AAGCAGAGATGCAGGCCGCCAGTCAGGGGAAAAGGA...GTTCACATTTGAACCCTGGGATGTAAAGTAATCAAAATGAAAGCAGAGATGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000456489.1
CDS-3UTR TCA 90 bp CAACCAGATAAATCTGAGACCGAACAAAAACACAGAGTGCTTTCTCATGTGGCTAGTGCAGAGGGTAGCTaGTATCCTTGTAGCTTCAGT +
Preference number: 4 (lower is better)
Translates to: QPDKSETEQKHRVLSHVASAEGS*YPCSFS
Trigger: ACTGAAGCTACAAGGATATCAGCTACCCTCTGCACT...AGCCACATGAGAAAGCACTCTGTGTTTTTGTTCGGTCTCAGATTTATCTGGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR TCA 90 bp GATAAATCTGAGACCGAACAAAAACACAGAGTGCTTTCTCATGTGGCTACAAGGAGTGCAGAGGGTAGCTaGTATCCTTGTAGCTTCAGT +
Preference number: 4 (lower is better)
Translates to: DKSETEQKHRVLSHVATRSAEGS*YPCSFS
Trigger: ACTGAAGCTACAAGGATATCAGCTACCCTCTGCACT...CCTTGTAGCCACATGAGAAAGCACTCTGTGTTTTTGTTCGGTCTCAGATTTATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR TCA 90 bp ACCTTCGCTTTAATTGGGCTCATTCTATACGTCTTTAAAACAGAGATACTGAACCTGGTTGCTGTTTCATaGCAGGGGGAAGTGCAGAGG +
Preference number: 4 (lower is better)
Translates to: TFALIGLILYVFKTEILNLVAVS*QGEVQR
Trigger: CCTCTGCACTTCCCCCTGTCATGAAACAGCAACCAG...GTTCAGTATCTCTGTTTTAAAGACGTATAGAATGAGCCCAATTAAAGCGAAGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR TCA 90 bp ATACCAAATGGTGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGCTGGTTGCTGTTTCATaGCAGGGGGAAGTGCAGAGG +
Preference number: 4 (lower is better)
Translates to: IPNGGFLEKEYNFQTACVLVAVS*QGEVQR
Trigger: CCTCTGCACTTCCCCCTGTCATGAAACAGCAACCAG...CACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCACCATTTGGTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR TCA 90 bp AGGAGAAACAGACATTATGGAAACCGAAAATCAAAAGGAAGTATGCAACAACCTCTGGTTGCTGTTTCATaGCAGGGGGAAGTGCAGAGG +
Preference number: 4 (lower is better)
Translates to: RRNRHYGNRKSKGSMQQPLVAVS*QGEVQR
Trigger: CCTCTGCACTTCCCCCTGTCATGAAACAGCAACCAG...AGGTTGTTGCATACTTCCTTTTGATTTTCGGTTTCCATAATGTCTGTTTCTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000456489.1
CDS-3UTR TCA 90 bp TTTATTGAGAGCTTCCAACTAGTGTTTAAAAGACAAACAGGGCTTCAGCTACAGTTCAGTCTTGATGACTaGGGAACAGCCCACTCTGCC +
Preference number: 4 (lower is better)
Translates to: FIESFQLVFKRQTGLQLQFSLDD*GTAHSA
Trigger: GGCAGAGTGGGCTGTTCCTCAGTCATCAAGACTGAA...CTGTAGCTGAAGCCCTGTTTGTCTTTTAAACACTAGTTGGAAGCTCTCAATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR TCA 90 bp GTTTCTAAACTCACACCAAGGACTGGGCATTGTAGGCCAAGAAGTCTACTTGGGCTGATCTACAGATGTTaGGCTTATGACAGATATACC +
Preference number: 4 (lower is better)
Translates to: VSKLTPRTGHCRPRSLLGLIYRC*AYDRYT
Trigger: GGTATATCTGTCATAAGCTCAACATCTGTAGATCAG...CCCAAGTAGACTTCTTGGCCTACAATGCCCAGTCCTTGGTGTGAGTTTAGAAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000381318.8
CDS-3UTR TCA 90 bp GGGATTTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAGGAACTGATCTACAGATGTTaGGCTTATGACAGATATACC +
Preference number: 4 (lower is better)
Translates to: GISATLEAIMRPVVRTKELIYRC*AYDRYT
Trigger: GGTATATCTGTCATAAGCTCAACATCTGTAGATCAG...TTCCTTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAAATCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR TCA 90 bp TTTCACTGGAGCGGGAACCTCATTTTCTGGGATTTTCTCTGCATAGTTTGCAGGCTTCCAAGCATTTGCTaGGATTCCTGTAATTGTTGC +
Preference number: 4 (lower is better)
Translates to: FHWSGNLIFWDFLCIVCRLPSIC*DSCNCC
Trigger: GCAACAATTACAGGAATCTCAGCAAATGCTTGGAAG...CCTGCAAACTATGCAGAGAAAATCCCAGAAAATGAGGTTCCCGCTCCAGTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379960.9
CDS-3UTR TCA 90 bp CTATGGGATTTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAACTTCCAAGCATTTGCTaGGATTCCTGTAATTGTTGC +
Preference number: 4 (lower is better)
Translates to: LWDFSDPRSHNETCSEDKLPSIC*DSCNCC
Trigger: GCAACAATTACAGGAATCTCAGCAAATGCTTGGAAG...TTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAAATCCCATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR TCA 90 bp TGCAATATGATTAGAGCATCGTACAAGGTAATAGCTTTGCCATGGAAAGAACTAGCTGGTTCTTGGTGTTaGTGGAAAAGCCGACCCAGC +
Preference number: 4 (lower is better)
Translates to: CNMIRASYKVIALPWKELAGSWC*WKSRPS
Trigger: GCTGGGTCGGCTTTTCCATCAACACCAAGAACCAGC...TAGTTCTTTCCATGGCAAAGCTATTACCTTGTACGATGCTCTAATCATATTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR TCA 90 bp TTACCATTTATTGTACATCTACATGCACTGCCCCATGAGATTACAGATGAAAAAGGTCGTGGAGGGCTCTaGAGAGGTTACTGCCAAAGG +
Preference number: 4 (lower is better)
Translates to: LPFIVHLHALPHEITDEKGRGGL*RGYCQR
Trigger: CCTTTGGCAGTAACCTCTTCAGAGCCCTCCACGACC...TTTTTCATCTGTAATCTCATGGGGCAGTGCATGTAGATGTACAATAAATGGTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000440794.2
CDS-3UTR TCA 90 bp ACCTTCGCTTTAATTGGGCTCATTCTATACGTCTTTAAAACAGAGATACTGAACCAAGGATATAGGGCTTaGGCTTGTAGCCCCTCCACC +
Preference number: 4 (lower is better)
Translates to: TFALIGLILYVFKTEILNQGYRA*ACSPST
Trigger: GGTGGAGGGGCTACAAGCTCAAGCCCTATATCCTTG...GTTCAGTATCTCTGTTTTAAAGACGTATAGAATGAGCCCAATTAAAGCGAAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR TCA 90 bp TTCTGTTTCAGTCGTTCAGCCTCCATGGACTTTTGCTTCTGGAGTTGTTGCTTACTTCCTTATGGGCCCTaGAATGAGTTTCACGTAAGA +
Preference number: 4 (lower is better)
Translates to: FCFSRSASMDFCFWSCCLLPYGP*NEFHVR
Trigger: TCTTACGTGAAACTCATTTCAGGGCCCATAAGGAAG...TAAGCAACAACTCCAGAAGCAAAAGTCCATGGAGGCTGAACGACTGAAACAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379960.9
CDS-3UTR TCA 90 bp TGCTGTAGATGGGTGATTTCGGCAATTCTCAACTCTCTAGATTTGTTTGTGCTCACTAGCAGGACTCTCTaGAGAACCAGAATCCATGCT +
Preference number: 4 (lower is better)
Translates to: CCRWVISAILNSLDLFVLTSRTL*RTRIHA
Trigger: AGCATGGATTCTGGTTCTTCAGAGAGTCCTGCTAGT...GAGCACAAACAAATCTAGAGAGTTGAGAATTGCCGAAATCACCCATCTACAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379960.9
CDS-3UTR TCA 90 bp TTGTTTCATGAAACAGGAAATTGTTTCGGGGCAGGGAGGATTGTCGAGAATGATACTAGCAGGACTCTCTaGAGAACCAGAATCCATGCT +
Preference number: 4 (lower is better)
Translates to: LFHETGNCFGAGRIVENDTSRTL*RTRIHA
Trigger: AGCATGGATTCTGGTTCTTCAGAGAGTCCTGCTAGT...ATCATTCTCGACAATCCTCCCTGCCCCGAAACAATTTCCTGTTTCATGAAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR TCA 90 bp CTTCTAGAACTTGAGGCTACTTACACAGAGGGATCTTTTCTCTCCTACCATCCCCAAGCAATTGGTCACTaGATTGAACACAAGTTGCTC +
Preference number: 4 (lower is better)
Translates to: LLELEATYTEGSFLSYHPQAIGH*IEHKLL
Trigger: GAGCAACTTGTGTTCAATTCAGTGACCAATTGCTTG...GGGATGGTAGGAGAGAAAAGATCCCTCTGTGTAAGTAGCCTCAAGTTCTAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR TCA 90 bp TGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGGCCGTGGGCTGCAAGCAATTGGTCACTaGATTGAACACAAGTTGCTC +
Preference number: 4 (lower is better)
Translates to: WFLRKGIQFPDSMCGRGLQAIGH*IEHKLL
Trigger: GAGCAACTTGTGTTCAATTCAGTGACCAATTGCTTG...CAGCCCACGGCCACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR TCA 90 bp GGTGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGGCCGTGGGCTTTATACTGCAGGTTTaGTTTGGGGCTGAAGACTTT +
Preference number: 4 (lower is better)
Translates to: GGFLEKEYNFQTACVAVGFILQV*FGAEDF
Trigger: AAAGTCTTCAGCCCCAAATCAAACCTGCAGTATAAA...GCCCACGGCCACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR TCA 90 bp GTTTCTAAACTCACACCAAGGACTGGGCATTGTAGGCCAAGAAGTCTACTTGGGCACAGCTTTGTTTCATaGAACAGGAAATTGTTTCGG +
Preference number: 4 (lower is better)
Translates to: VSKLTPRTGHCRPRSLLGHSFVS*NRKLFR
Trigger: CCGAAACAATTTCCTGTTTCATGAAACAAAGCTGTG...CCCAAGTAGACTTCTTGGCCTACAATGCCCAGTCCTTGGTGTGAGTTTAGAAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000381318.8
CDS-3UTR TCA 90 bp TTCCATGTGACCGACAGGGTTTCAACTCGATGCCTTCAACCACGTTCACCATCAGATAATGACTTTCTGTaGCCATATTCTAAGCATGCT +
Preference number: 4 (lower is better)
Translates to: FHVTDRVSTRCLQPRSPSDNDFL*PYSKHA
Trigger: AGCATGCTTAGAATATGGTCACAGAAAGTCATTATC...TGATGGTGAACGTGGTTGAAGGCATCGAGTTGAAACCCTGTCGGTCACATGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381285.8
CDS-3UTR TCA 90 bp GTTGACCAGCCAATTACTTCCTCCGTGTCAGGTCTAACCAGAAGAGGTCTGCATACCAAAAAGAGCTGTTaGAATGTCCTACAACAATCA +
Preference number: 4 (lower is better)
Translates to: VDQPITSSVSGLTRRGLHTKKSC*NVLQQS
Trigger: TGATTGTTGTAGGACATTTCAACAGCTCTTTTTGGT...ATGCAGACCTCTTCTGGTTAGACCTGACACGGAGGAAGTAATTGGCTGGTCAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR TCA 90 bp AGCCAAAAGAGATTTTTCCAACATGGCTGCCAACCGAGACCCAGTGACCCAACATCTAACATGTTCAGTTaGAAGTTTCTAACTACAGGG +
Preference number: 4 (lower is better)
Translates to: SQKRFFQHGCQPRPSDPTSNMFS*KFLTTG
Trigger: CCCTGTAGTTAGAAACTTTCAACTGAACATGTTAGA...TGTTGGGTCACTGGGTCTCGGTTGGCAGCCATGTTGGAAAAATCTCTTTTGGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR TCA 90 bp GGTTCAAGATACACAGGAAGAGCAATTTGTACTGATGTTGCTACTGGTTTAAAGGGGGCGCCATTAAGTTaGCCAGCCAATTACTTCCTC +
Preference number: 4 (lower is better)
Translates to: GSRYTGRAICTDVATGLKGAPLS*PANYFL
Trigger: GAGGAAGTAATTGGCTGGTCAACTTAATGGCGCCCC...CTTTAAACCAGTAGCAACATCAGTACAAATTGCTCTTCCTGTGTATCTTGAACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR TCA 90 bp TGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGGCCGTGGGCTGGACAGTGCCTCTAAGTaGTTTGCAGATTATTCATGC +
Preference number: 4 (lower is better)
Translates to: WFLRKGIQFPDSMCGRGLDSASK*FADYSC
Trigger: GCATGAATAATCTGCAAATCACTTAGAGGCACTGTC...CAGCCCACGGCCACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR TCA 90 bp AGACTGTGGATATCGTTGATCGTAACGACCTCAGTGGTGTTGTCTACTGATTTTGGGATGGACAACATATaGTTCATTGCTGGCTTGGGT +
Preference number: 4 (lower is better)
Translates to: RLWISLIVTTSVVLSTDFGMDNI*FIAGLG
Trigger: ACCCAAGCCAGCAATGAATCATATGTTGTCCATCCC...AAAATCAGTAGACAACACCACTGAGGTCGTTACGATCAACGATATCCACAGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR TCA 90 bp CAACCAGATAAATCTGAGACCGAACAAAAACACAGAGTGCTTTCTCATGTGGCTGGGATGGACAACATATaGTTCATTGCTGGCTTGGGT +
Preference number: 4 (lower is better)
Translates to: QPDKSETEQKHRVLSHVAGMDNI*FIAGLG
Trigger: ACCCAAGCCAGCAATGAATCATATGTTGTCCATCCC...AGCCACATGAGAAAGCACTCTGTGTTTTTGTTCGGTCTCAGATTTATCTGGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR GCA 90 bp GATAAATCTGAGACCGAACAAAAACACAGAGTGCTTTCTCATGTGGCTACAAGGACCTCCCATACCAAATaGTGGTGCGCTAGAAATAGC +
Preference number: 4 (lower is better)
Translates to: DKSETEQKHRVLSHVATRTSHTK*WCARNS
Trigger: GCTATTTCTAGCGCACCAGCATTTGGTATGGGAGGT...CCTTGTAGCCACATGAGAAAGCACTCTGTGTTTTTGTTCGGTCTCAGATTTATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR GCA 90 bp TCAATTTCTTTCCTCCTCTCCTCCTCTCTCTGCCGTTCTAGCTCCCGCTGCTTTTGTGGTAAACTTGACTaGATAAGAATAGTTCTTGCT +
Preference number: 4 (lower is better)
Translates to: SISFLLSSSLCRSSSRCFCGKLD*IRIVLA
Trigger: AGCAAGAACTATTCTTATGCAGTCAAGTTTACCACA...AAAGCAGCGGGAGCTAGAACGGCAGAGAGAGGAGGAGAGGAGGAAAGAAATTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379960.9
CDS-3UTR GCA 90 bp CAGGATTCAGCACATTCAAGCACAGAACAGGTCACCAGCAACGACTGCTGCTATCAGGATAAATTCCTCTaGTGTAAGTTTTCCATCTTG +
Preference number: 4 (lower is better)
Translates to: QDSAHSSTEQVTSNDCCYQDKFL*CKFSIL
Trigger: CAAGATGGAAAACTTACAGCAGAGGAATTTATCCTG...ATAGCAGCAGTCGTTGCTGGTGACCTGTTCTGTGCTTGAATGTGCTGAATCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000381318.8
CDS-3UTR GCA 90 bp TTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAGGAAAACACATCAATGAGGTGCATTaGCAGGATAAATTCCTCTGC +
Preference number: 4 (lower is better)
Translates to: FSDPRSHNETCSEDKGKHINEVH*QDKFLC
Trigger: GCAGAGGAATTTATCCTGGCAATGCACCTCATTGAT...GTGTTTTCCTTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR GCA 90 bp AACAGGGCTTCAGCTACAGCATATCTAACACACAAACGGACCATGAGCTCCATTATCAATGAGGTGCATTaGCAGGATAAATTCCTCTGC +
Preference number: 4 (lower is better)
Translates to: NRASATAYLTHKRTMSSIINEVH*QDKFLC
Trigger: GCAGAGGAATTTATCCTGGCAATGCACCTCATTGAT...AATGGAGCTCATGGTCCGTTTGTGTGTTAGATATGCTGTAGCTGAAGCCCTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR GCA 90 bp GATAAATCTGAGACCGAACAAAAACACAGAGTGCTTTCTCATGTGGCTACAAGGCGCTGCTTTTCCAGTTaGTTCTCCAGTTCCAGTTGT +
Preference number: 4 (lower is better)
Translates to: DKSETEQKHRVLSHVATRRCFSS*FSSSSC
Trigger: ACAACTGGAACTGGAGAAGCAACTGGAAAAGCAGCG...CCTTGTAGCCACATGAGAAAGCACTCTGTGTTTTTGTTCGGTCTCAGATTTATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR GCA 90 bp GTTTCTAAACTCACACCAAGGACTGGGCATTGTAGGCCAAGAAGTCTACTTGGGGATTCCTGTAATTGTTaGTGTAGATGGGTGATTTCG +
Preference number: 4 (lower is better)
Translates to: VSKLTPRTGHCRPRSLLGDSCNC*CRWVIS
Trigger: CGAAATCACCCATCTACAGCAACAATTACAGGAATC...CCCAAGTAGACTTCTTGGCCTACAATGCCCAGTCCTTGGTGTGAGTTTAGAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000381318.8
CDS-3UTR GCA 90 bp AACAGGGCTTCAGCTACAGCATATCTAACACACAAACGGACCATGAGCTCCATTTTCTGGGATTTTCTCTaGATAGTTTGCAGGGAACCA +
Preference number: 4 (lower is better)
Translates to: NRASATAYLTHKRTMSSIFWDFL*IVCREP
Trigger: TGGTTCCCTGCAAACTATGCAGAGAAAATCCCAGAA...AATGGAGCTCATGGTCCGTTTGTGTGTTAGATATGCTGTAGCTGAAGCCCTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR GCA 90 bp TTACCATTTATTGTACATCTACATGCACTGCCCCATGAGATTACAGATGAAAAACTGGTTTCTCATTCGTaGTGGTGGGCCACGTGGAGC +
Preference number: 4 (lower is better)
Translates to: LPFIVHLHALPHEITDEKLVSHS*WWATWS
Trigger: GCTCCACGTGGCCCACCAGCACGAATGAGAAACCAG...TTTTTCATCTGTAATCTCATGGGGCAGTGCATGTAGATGTACAATAAATGGTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000440794.2
CDS-3UTR GCA 90 bp ACCTTCGCTTTAATTGGGCTCATTCTATACGTCTTTAAAACAGAGATACTGAACGTAAAGGCGGACCTCTaGCTTAACTGGCCGGCACTT +
Preference number: 4 (lower is better)
Translates to: TFALIGLILYVFKTEILNVKADL*LNWPAL
Trigger: AAGTGCCGGCCAGTTAAGGCAGAGGTCCGCCTTTAC...GTTCAGTATCTCTGTTTTAAAGACGTATAGAATGAGCCCAATTAAAGCGAAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR GCA 90 bp ATACCAAATGGTGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGGTAAAGGCGGACCTCTaGCTTAACTGGCCGGCACTT +
Preference number: 4 (lower is better)
Translates to: IPNGGFLEKEYNFQTACVVKADL*LNWPAL
Trigger: AAGTGCCGGCCAGTTAAGGCAGAGGTCCGCCTTTAC...CACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCACCATTTGGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR GCA 90 bp ATCCCTGAATATCAGGTGCAAATCATGGCAGGGCAAATTTCTTTCTTTTTATTTAACGACCGGCTTGGCTaGTGGAGAGGCTACTCGCTT +
Preference number: 4 (lower is better)
Translates to: IPEYQVQIMAGQISFFLFNDRLG*WRGYSL
Trigger: AAGCGAGTAGCCTCTCCAGCAGCCAAGCCGGTCGTT...AAATAAAAAGAAAGAAATTTGCCCTGCCATGATTTGCACCTGATATTCAGGGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437126.5
CDS-3UTR GCA 90 bp AAAAATCTCTGTGACCAGCTGCAGGTCATTCACATAGTTCTCCTCGGTGACAATACACCGAGGATCCATTaGCAATCTTTTGACGAACTC +
Preference number: 4 (lower is better)
Translates to: KNLCDQLQVIHIVLLGDNTPRIH*QSFDEL
Trigger: GAGTTCGTCAAAAGATTGGCAATGGATCCTCGGTGT...ATTGTCACCGAGGAGAACTATGTGAATGACCTGCAGCTGGTCACAGAGATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381285.8
CDS-3UTR GCA 90 bp CCAAATGGTGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGGCCCGCACCTGGCCGGTTTaGATTATTTCTCTGAAGAAC +
Preference number: 4 (lower is better)
Translates to: PNGGFLEKEYNFQTACVARTWPV*IISLKN
Trigger: GTTCTTCAGAGAAATAATGCAAACCGGCCAGGTGCG...GGCCACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCACCATTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR GCA 90 bp GGTTCAAGATACACAGGAAGAGCAATTTGTACTGATGTTGCTACTGGTTTAAAGAGGTTGGAAAAGGCTTaGTGTCCTCCCAGGAAAGGG +
Preference number: 4 (lower is better)
Translates to: GSRYTGRAICTDVATGLKRLEKA*CPPRKG
Trigger: CCCTTTCCTGGGAGGACAGCAAGCCTTTTCCAACCT...CTTTAAACCAGTAGCAACATCAGTACAAATTGCTCTTCCTGTGTATCTTGAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR GCA 90 bp TTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAGGAAAACACCGTAGTCCGGAAGATTaGATGACGCATGAAAACAAA +
Preference number: 4 (lower is better)
Translates to: FSDPRSHNETCSEDKGKHRSPED*MTHENK
Trigger: TTTGTTTTCATGCGTCATGCAATCTTCCGGACTACG...GTGTTTTCCTTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR GCA 90 bp GACAGACTCCTTGTTGGCAAGGAGCATTTAATTTCTATGAAATATAGCCCAGGTAACACCAAGGTCCCATaGGAGGTCATAGCTACAGGA +
Preference number: 4 (lower is better)
Translates to: DRLLVGKEHLISMKYSPGNTKVP*EVIATG
Trigger: TCCTGTAGCTATGACCTCGCATGGGACCTTGGTGTT...ACCTGGGCTATATTTCATAGAAATTAAATGCTCCTTGCCAACAAGGAGTCTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR GCA 90 bp GGAATCAGAACTGAATCCACGCAACAATACACCAGTGTGTTTTCATTGACATATCTGGACTCCTGGGGTTaGCCCCTCCTGAAATCATTT +
Preference number: 4 (lower is better)
Translates to: GIRTESTQQYTSVFSLTYLDSWG*PLLKSF
Trigger: AAATGATTTCAGGAGGGGGCAACCCCAGGAGTCCAG...ATATGTCAATGAAAACACACTGGTGTATTGTTGCGTGGATTCAGTTCTGATTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR GCA 90 bp GGAATCAGAACTGAATCCACGCAACAATACACCAGTGTGTTTTCATTGACATATGGGCACAGCTGCAAATaGTGGTGCGCTAGAAATAGC +
Preference number: 4 (lower is better)
Translates to: GIRTESTQQYTSVFSLTYGHSCK*WCARNS
Trigger: GCTATTTCTAGCGCACCAGCATTTGCAGCTGTGCCC...ATATGTCAATGAAAACACACTGGTGTATTGTTGCGTGGATTCAGTTCTGATTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381285.8
CDS-3UTR CCA 90 bp AGACTGTGGATATCGTTGATCGTAACGACCTCAGTGGTGTTGTCTACTGATTTTGCCACCAAAAGGTGTTaGAAACTGAGCCATGGTTCT +
Preference number: 4 (lower is better)
Translates to: RLWISLIVTTSVVLSTDFATKRC*KLSHGS
Trigger: AGAACCATGGCTCAGTTTCCAACACCTTTTGGTGGC...AAAATCAGTAGACAACACCACTGAGGTCGTTACGATCAACGATATCCACAGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CCA 90 bp TATGGGATTTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAGGCTAGAAATAGCAACTaGTTGCTGTTTCATGACAGG +
Preference number: 4 (lower is better)
Translates to: YGISATLEAIMRPVVRTKARNSN*LLFHDR
Trigger: CCTGTCATGAAACAGCAACCAGTTGCTATTTCTAGC...CTTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAAATCCCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CCA 90 bp AACAGGGCTTCAGCTACAGCATATCTAACACACAAACGGACCATGAGCTCCATTGCTAGAAATAGCAACTaGTTGCTGTTTCATGACAGG +
Preference number: 4 (lower is better)
Translates to: NRASATAYLTHKRTMSSIARNSN*LLFHDR
Trigger: CCTGTCATGAAACAGCAACCAGTTGCTATTTCTAGC...AATGGAGCTCATGGTCCGTTTGTGTGTTAGATATGCTGTAGCTGAAGCCCTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CCA 90 bp TGCAATATGATTAGAGCATCGTACAAGGTAATAGCTTTGCCATGGAAAGAACTAAACAGCTGTAAGCGGTaGCATGCTGGCGATACCTCC +
Preference number: 4 (lower is better)
Translates to: CNMIRASYKVIALPWKELNSCKR*HAGDTS
Trigger: GGAGGTATCGCCAGCATGCCACCGCTTACAGCTGTT...TAGTTCTTTCCATGGCAAAGCTATTACCTTGTACGATGCTCTAATCATATTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CCA 90 bp ACCTTCGCTTTAATTGGGCTCATTCTATACGTCTTTAAAACAGAGATACTGAACGGGGCACAGCTGCTGTaGGAACAGAAGATACTAGGG +
Preference number: 4 (lower is better)
Translates to: TFALIGLILYVFKTEILNGAQLL*EQKILG
Trigger: CCCTAGTATCTTCTGTTCCCACAGCAGCTGTGCCCC...GTTCAGTATCTCTGTTTTAAAGACGTATAGAATGAGCCCAATTAAAGCGAAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CCA 90 bp ATACCAAATGGTGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGGGGGCACAGCTGCTGTaGGAACAGAAGATACTAGGG +
Preference number: 4 (lower is better)
Translates to: IPNGGFLEKEYNFQTACVGAQLL*EQKILG
Trigger: CCCTAGTATCTTCTGTTCCCACAGCAGCTGTGCCCC...CACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCACCATTTGGTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CCA 90 bp TGCAATATGATTAGAGCATCGTACAAGGTAATAGCTTTGCCATGGAAAGAACTACCACTCTGCCACTGGTaGGACACTGGCCACATCAAA +
Preference number: 4 (lower is better)
Translates to: CNMIRASYKVIALPWKELPLCHW*DTGHIK
Trigger: TTTGATGTGGCCAGTGTCCCACCAGTGGCAGAGTGG...TAGTTCTTTCCATGGCAAAGCTATTACCTTGTACGATGCTCTAATCATATTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CCA 90 bp ACCTTCGCTTTAATTGGGCTCATTCTATACGTCTTTAAAACAGAGATACTGAACCAGGACAGGTGGCAGTaGTTGGCCAGACATAGCTAC +
Preference number: 4 (lower is better)
Translates to: TFALIGLILYVFKTEILNQDRWQ*LARHSY
Trigger: GTAGCTATGTCTGGCCAACCACTGCCACCTGTCCTG...GTTCAGTATCTCTGTTTTAAAGACGTATAGAATGAGCCCAATTAAAGCGAAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CCA 90 bp CTATGGGATTTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAATCAATTTCTTGCCTTTaGGTGGTCAATCGACATCTG +
Preference number: 4 (lower is better)
Translates to: LWDFSDPRSHNETCSEDKSISCL*VVNRHL
Trigger: CAGATGTCGATTGACCACCCAAAGGCAAGAAATTGA...TTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAAATCCCATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CCA 90 bp GGTGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGGCCGTGGGCAATTGTTGCTGTAGATaGGTGATTTCGGCAATTCTC +
Preference number: 4 (lower is better)
Translates to: GGFLEKEYNFQTACVAVGNCCCR*VISAIL
Trigger: GAGAATTGCCGAAATCACCCATCTACAGCAACAATT...GCCCACGGCCACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CCA 90 bp AGACTGTGGATATCGTTGATCGTAACGACCTCAGTGGTGTTGTCTACTGATTTTGTCGTTCAGCCTCCATaGACTTTTGCTTCTGGAGTT +
Preference number: 4 (lower is better)
Translates to: RLWISLIVTTSVVLSTDFVVQPP*TFASGV
Trigger: AACTCCAGAAGCAAAAGTCCATGGAGGCTGAACGAC...AAAATCAGTAGACAACACCACTGAGGTCGTTACGATCAACGATATCCACAGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CCA 90 bp CAACCAGATAAATCTGAGACCGAACAAAAACACAGAGTGCTTTCTCATGTGGCTTTCGTGGAGTTTTCTTaGTCTCTGATGCTCGTCCTC +
Preference number: 4 (lower is better)
Translates to: QPDKSETEQKHRVLSHVAFVEFS*SLMLVL
Trigger: GAGGACGAGCATCAGAGACCAAGAAAACTCCACGAA...AGCCACATGAGAAAGCACTCTGTGTTTTTGTTCGGTCTCAGATTTATCTGGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CCA 90 bp TTTTTGAAAAATCTCTGTGACCAGCTGCAGGTCATTCACATAGTTCTCCTCGGTGACAGCTGGCTTAGCTaGTTCTTGGTGTTGATGGAA +
Preference number: 4 (lower is better)
Translates to: FLKNLCDQLQVIHIVLLGDSWLS*FLVLME
Trigger: TTCCATCAACACCAAGAACCAGCTAAGCCAGCTGTC...ACCGAGGAGAACTATGTGAATGACCTGCAGCTGGTCACAGAGATTTTTCAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000381285.8
CDS-3UTR CCA 90 bp TGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGGCCGTGGGCTGACTATGTCTCCTGGCTaGATAGTGATTTCATCATGG +
Preference number: 4 (lower is better)
Translates to: WFLRKGIQFPDSMCGRGLTMSPG*IVISSW
Trigger: CCATGATGAAATCACTATCCAGCCAGGAGACATAGT...CAGCCCACGGCCACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CCA 90 bp GGTGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGGCCGTGGGCGGGAACCTCATTTTCTaGGATTTTCTCTGCATAGTT +
Preference number: 4 (lower is better)
Translates to: GGFLEKEYNFQTACVAVGGNLIF*DFLCIV
Trigger: AACTATGCAGAGAAAATCCCAGAAAATGAGGTTCCC...GCCCACGGCCACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CCA 90 bp GGGATTTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAGGAAGGGAACCTCATTTTCTaGGATTTTCTCTGCATAGTT +
Preference number: 4 (lower is better)
Translates to: GISATLEAIMRPVVRTKEGNLIF*DFLCIV
Trigger: AACTATGCAGAGAAAATCCCAGAAAATGAGGTTCCC...TTCCTTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAAATCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CCA 90 bp GATAAATCTGAGACCGAACAAAAACACAGAGTGCTTTCTCATGTGGCTACAAGGAGTCACTGGTTTCACTaGAGCGGGAACCTCATTTTC +
Preference number: 4 (lower is better)
Translates to: DKSETEQKHRVLSHVATRSHWFH*SGNLIF
Trigger: GAAAATGAGGTTCCCGCTCCAGTGAAACCAGTGACT...CCTTGTAGCCACATGAGAAAGCACTCTGTGTTTTTGTTCGGTCTCAGATTTATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CCA 90 bp CAACCAGATAAATCTGAGACCGAACAAAAACACAGAGTGCTTTCTCATGTGGCTGTTTCACGTAAGACTTaGGGAACCAACCCTTCTGAC +
Preference number: 4 (lower is better)
Translates to: QPDKSETEQKHRVLSHVAVSRKT*GTNPSD
Trigger: GTCAGAAGGGTTGGTTCCCCAAGTCTTACGTGAAAC...AGCCACATGAGAAAGCACTCTGTGTTTTTGTTCGGTCTCAGATTTATCTGGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CCA 90 bp CTATGGGATTTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAATATAAAACTAGAGAGTaGCATCCCTTTACACCGAGG +
Preference number: 4 (lower is better)
Translates to: LWDFSDPRSHNETCSEDKYKTRE*HPFTPR
Trigger: CCTCGGTGTAAAGGGATGCCACTCTCTAGTTTTATA...TTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAAATCCCATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CCA 90 bp TATGGGATTTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAGTATAAAACTAGAGAGTaGCATCCCTTTACACCGAGG +
Preference number: 4 (lower is better)
Translates to: YGISATLEAIMRPVVRTKYKTRE*HPFTPR
Trigger: CCTCGGTGTAAAGGGATGCCACTCTCTAGTTTTATA...CTTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAAATCCCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CCA 90 bp ATTGTTTCGGGGCAGGGAGGATTGTCGAGAATGATTCCTAGGAGCTTTGAGGGGATTTTTAATGATCAGTaGGTATCTTGTTACCCGTTG +
Preference number: 4 (lower is better)
Translates to: IVSGQGGLSRMIPRSFEGIFNDQ*VSCYPL
Trigger: CAACGGGTAACAAGATACCCACTGATCATTAAAAAT...CCCCTCAAAGCTCCTAGGAATCATTCTCGACAATCCTCCCTGCCCCGAAACAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CCA 90 bp AGCCAAAAGAGATTTTTCCAACATGGCTGCCAACCGAGACCCAGTGACCCAACAGAACACAGCTTTATCTaGTGGGCTTTGAATACTAAA +
Preference number: 4 (lower is better)
Translates to: SQKRFFQHGCQPRPSDPTEHSFI*WALNTK
Trigger: TTTAGTATTCAAAGCCCACCAGATAAAGCTGTGTTC...TGTTGGGTCACTGGGTCTCGGTTGGCAGCCATGTTGGAAAAATCTCTTTTGGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CCA 90 bp CCAAATGGTGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGGCCCAAGGGACAGTTGACTaGCTGACTTGTTTCCACTCA +
Preference number: 4 (lower is better)
Translates to: PNGGFLEKEYNFQTACVAQGTVD*LTCFHS
Trigger: TGAGTGGAAACAAGTCAGCCAGTCAACTGTCCCTTG...GGCCACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCACCATTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CCA 90 bp ATACCAAATGGTGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGAACCAGAATCCATGCTaGCCTAGCACAGGAGACGGG +
Preference number: 4 (lower is better)
Translates to: IPNGGFLEKEYNFQTACVNQNPC*PSTGDG
Trigger: CCCGTCTCCTGTGCTAGGCCAGCATGGATTCTGGTT...CACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCACCATTTGGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381285.8
CDS-3UTR CCA 90 bp AACAGGGCTTCAGCTACAGCATATCTAACACACAAACGGACCATGAGCTCCATTTATGAGGCAATAACCTaGGCAATTTCTTCTCCCGAA +
Preference number: 4 (lower is better)
Translates to: NRASATAYLTHKRTMSSIYEAIT*AISSPE
Trigger: TTCGGGAGAAGAAATTGCCCAGGTTATTGCCTCATA...AATGGAGCTCATGGTCCGTTTGTGTGTTAGATATGCTGTAGCTGAAGCCCTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399349.5
CDS-3UTR CCA 90 bp CATTGTAATTACCATTTATTGTACATCTACATGCACTGCCCCATGAGATTACAGTGTGGCCTAGTCTCATaGAGGGGTGGAGGAGGAAGT +
Preference number: 4 (lower is better)
Translates to: HCNYHLLYIYMHCPMRLQCGLVS*RGGGGS
Trigger: ACTTCCTCCTCCACCCCTCCATGAGACTAGGCCACA...CTGTAATCTCATGGGGCAGTGCATGTAGATGTACAATAAATGGTAATTACAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440794.2
3UTR CAA 72 bp TGGCAGGAGCATCTCAAGGATGCTCAACAGAGTCACTaGAGGAAAAAGAGTCACATATTGCTTTCTCATGCT +
Preference number: 4 (lower is better)
Translates to: WQEHLKDAQQSH*RKKSHILLSHA
Trigger: AGCATGAGAAAGCAATATGTGACTCTTTTTCCTCAAGTGACTCTGTTGAGCATCCTTGAGATGCTCCTGCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR TCA 90 bp GATAAATCTGAGACCGAACAAAAACACAGAGTGCTTTCTCATGTGGCTACAAGGAAACTATGGAACTGCTaGTCATGCTTCGCTCTTTCC +
Preference number: 4 (lower is better)
Translates to: DKSETEQKHRVLSHVATRKLWNC*SCFALS
Trigger: GGAAAGAGCGAAGCATGATCAGCAGTTCCATAGTTT...CCTTGTAGCCACATGAGAAAGCACTCTGTGTTTTTGTTCGGTCTCAGATTTATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR TCA 90 bp ACATCCCAGGGTTCAAATGTGAACATGCTCCTTCTTCTCCCCAGCACTATCTTCATGGAAAACTCCACTTaGTCCATTCTTCCATCATTA +
Preference number: 4 (lower is better)
Translates to: TSQGSNVNMLLLLPSTIFMENST*SILPSL
Trigger: TAATGATGGAAGAATGGATCAAGTGGAGTTTTCCAT...GAAGATAGTGCTGGGGAGAAGAAGGAGCATGTTCACATTTGAACCCTGGGATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456489.1
CDS-3UTR TCA 90 bp TGCAATATGATTAGAGCATCGTACAAGGTAATAGCTTTGCCATGGAAAGAACTATTCAGTCTTGATGACTaGGGAACAGCCCACTCTGCC +
Preference number: 4 (lower is better)
Translates to: CNMIRASYKVIALPWKELFSLDD*GTAHSA
Trigger: GGCAGAGTGGGCTGTTCCTCAGTCATCAAGACTGAA...TAGTTCTTTCCATGGCAAAGCTATTACCTTGTACGATGCTCTAATCATATTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR TCA 90 bp CCAACTCAACCAGATAAATCTGAGACCGAACAAAAACACAGAGTGCTTTCTCATAGAAAGATTCCATATTaGAGCCAGCTGAGCCTGTGG +
Preference number: 4 (lower is better)
Translates to: PTQPDKSETEQKHRVLSHRKIPY*SQLSLW
Trigger: CCACAGGCTCAGCTGGCTTCAATATGGAATCTTTCT...ATGAGAAAGCACTCTGTGTTTTTGTTCGGTCTCAGATTTATCTGGTTGAGTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR TCA 90 bp CAACCAGATAAATCTGAGACCGAACAAAAACACAGAGTGCTTTCTCATGTGGCTCAGATGTTGAGCTTATaGCAGATATACCACTGCCAG +
Preference number: 4 (lower is better)
Translates to: QPDKSETEQKHRVLSHVAQMLSL*QIYHCQ
Trigger: CTGGCAGTGGTATATCTGTCATAAGCTCAACATCTG...AGCCACATGAGAAAGCACTCTGTGTTTTTGTTCGGTCTCAGATTTATCTGGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR TCA 90 bp AGCTGCTGCGTCCCACCAACAAAAATTCCCTTCCACCTAAAATTCCAGAAGTCACTGATCTACAGATGTTaGGCTTATGACAGATATACC +
Preference number: 4 (lower is better)
Translates to: SCCVPPTKIPFHLKFQKSLIYRC*AYDRYT
Trigger: GGTATATCTGTCATAAGCTCAACATCTGTAGATCAG...TGACTTCTGGAATTTTAGGTGGAAGGGAATTTTTGTTGGTGGGACGCAGCAGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR TCA 90 bp GAATCAGTCACTGGTTTCACTGGAGCGGGAACCTCATTTTCTGGGATTTTCTCTTGGTCAATCGACATCTaGTATCTTGAAGTTTCCCTT +
Preference number: 4 (lower is better)
Translates to: ESVTGFTGAGTSFSGIFSWSIDI*YLEVSL
Trigger: AAGGGAAACTTCAAGATATCAGATGTCGATTGACCA...AGAGAAAATCCCAGAAAATGAGGTTCCCGCTCCAGTGAAACCAGTGACTGATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379960.9
CDS-3UTR TCA 90 bp CTATGGGATTTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAATGGTCAATCGACATCTaGTATCTTGAAGTTTCCCTT +
Preference number: 4 (lower is better)
Translates to: LWDFSDPRSHNETCSEDKWSIDI*YLEVSL
Trigger: AAGGGAAACTTCAAGATATCAGATGTCGATTGACCA...TTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAAATCCCATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR TCA 90 bp GATAAATCTGAGACCGAACAAAAACACAGAGTGCTTTCTCATGTGGCTACAAGGGTTGCTGTAGATGGGTaGTTTCGGCAATTCTCAACT +
Preference number: 4 (lower is better)
Translates to: DKSETEQKHRVLSHVATRVAVDG*FRQFST
Trigger: AGTTGAGAATTGCCGAAATCACCCATCTACAGCAAC...CCTTGTAGCCACATGAGAAAGCACTCTGTGTTTTTGTTCGGTCTCAGATTTATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR TCA 90 bp TGCAATATGATTAGAGCATCGTACAAGGTAATAGCTTTGCCATGGAAAGAACTATGCTTGTCCCTTTCCTaGGCTCGTCTTTGGGCTTCT +
Preference number: 4 (lower is better)
Translates to: CNMIRASYKVIALPWKELCLSLS*ARLWAS
Trigger: AGAAGCCCAAAGACGAGCTCAGGAAAGGGACAAGCA...TAGTTCTTTCCATGGCAAAGCTATTACCTTGTACGATGCTCTAATCATATTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR TCA 90 bp TGCAATATGATTAGAGCATCGTACAAGGTAATAGCTTTGCCATGGAAAGAACTAGGCAGGGGCAGATGTTaGATCAGTCACTGGTTTCAC +
Preference number: 4 (lower is better)
Translates to: CNMIRASYKVIALPWKELGRGRC*ISHWFH
Trigger: GTGAAACCAGTGACTGATTCAACATCTGCCCCTGCC...TAGTTCTTTCCATGGCAAAGCTATTACCTTGTACGATGCTCTAATCATATTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR TCA 90 bp CATTGTAATTACCATTTATTGTACATCTACATGCACTGCCCCATGAGATTACAGGGCAGGGGCAGATGTTaGATCAGTCACTGGTTTCAC +
Preference number: 4 (lower is better)
Translates to: HCNYHLLYIYMHCPMRLQGRGRC*ISHWFH
Trigger: GTGAAACCAGTGACTGATTCAACATCTGCCCCTGCC...CTGTAATCTCATGGGGCAGTGCATGTAGATGTACAATAAATGGTAATTACAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440794.2
CDS-3UTR TCA 90 bp CAACCAGATAAATCTGAGACCGAACAAAAACACAGAGTGCTTTCTCATGTGGCTTTATGGGCCCTGAAATaGGTTTCACGTAAGACTTGG +
Preference number: 4 (lower is better)
Translates to: QPDKSETEQKHRVLSHVALWALK*VSRKTW
Trigger: CCAAGTCTTACGTGAAACTCATTTCAGGGCCCATAA...AGCCACATGAGAAAGCACTCTGTGTTTTTGTTCGGTCTCAGATTTATCTGGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR TCA 90 bp CCAAATGGTGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGGCCCTTCCTTATGGGCCCTaGAATGAGTTTCACGTAAGA +
Preference number: 4 (lower is better)
Translates to: PNGGFLEKEYNFQTACVALPYGP*NEFHVR
Trigger: TCTTACGTGAAACTCATTTCAGGGCCCATAAGGAAG...GGCCACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCACCATTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381318.8
ENST00000399367.7
CDS-3UTR TCA 90 bp AAAAATCTCTGTGACCAGCTGCAGGTCATTCACATAGTTCTCCTCGGTGACAATTTTGAAAAATCTCTGTaGCCAGCTGCAGGTCATTCA +
Preference number: 4 (lower is better)
Translates to: KNLCDQLQVIHIVLLGDNFEKSL*PAAGHS
Trigger: TGAATGACCTGCAGCTGGTCACAGAGATTTTTCAAA...ATTGTCACCGAGGAGAACTATGTGAATGACCTGCAGCTGGTCACAGAGATTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000381285.8
CDS-3UTR TCA 90 bp TTGTTTCATGAAACAGGAAATTGTTTCGGGGCAGGGAGGATTGTCGAGAATGATCCATATCCCTGTGACTaGATACCAAATGGTGGTTTC +
Preference number: 4 (lower is better)
Translates to: LFHETGNCFGAGRIVENDPYPCD*IPNGGF
Trigger: GAAACCACCATTTGGTATTCAGTCACAGGGATATGG...ATCATTCTCGACAATCCTCCCTGCCCCGAAACAATTTCCTGTTTCATGAAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR TCA 90 bp TGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGGCCGTGGGCTGCACAGCTTTGTTTCATaGAACAGGAAATTGTTTCGG +
Preference number: 4 (lower is better)
Translates to: WFLRKGIQFPDSMCGRGLHSFVS*NRKLFR
Trigger: CCGAAACAATTTCCTGTTTCATGAAACAAAGCTGTG...CAGCCCACGGCCACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR TCA 90 bp GGTGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGGCCGTGGGCAACAGGAGGGTTACATaGGTTCTCCAAAAATATAGA +
Preference number: 4 (lower is better)
Translates to: GGFLEKEYNFQTACVAVGNRRVT*VLQKYR
Trigger: TCTATATTTTTGGAGAACTCATGTAACCCTCCTGTT...GCCCACGGCCACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000381318.8
CDS-3UTR TCA 90 bp GACAGACTCCTTGTTGGCAAGGAGCATTTAATTTCTATGAAATATAGCCCAGGTTGGTCTTCTAGAACTTaGGGCTACTTACACAGAGGG +
Preference number: 4 (lower is better)
Translates to: DRLLVGKEHLISMKYSPGWSSRT*GYLHRG
Trigger: CCCTCTGTGTAAGTAGCCTCAAGTTCTAGAAGACCA...ACCTGGGCTATATTTCATAGAAATTAAATGCTCCTTGCCAACAAGGAGTCTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR TCA 90 bp CTTCTAGAACTTGAGGCTACTTACACAGAGGGATCTTTTCTCTCCTACCATCCCCAAATCCAGGTGAGATaGGTTTGCAATTTCTGTCAA +
Preference number: 4 (lower is better)
Translates to: LLELEATYTEGSFLSYHPQIQVR*VCNFCQ
Trigger: TTGACAGAAATTGCAAACTCATCTCACCTGGATTTG...GGGATGGTAGGAGAGAAAAGATCCCTCTGTGTAAGTAGCCTCAAGTTCTAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR TCA 90 bp TGCAATATGATTAGAGCATCGTACAAGGTAATAGCTTTGCCATGGAAAGAACTAGGCTTTCATCCACCATaGCTATGTCTCCTGGCTGGA +
Preference number: 4 (lower is better)
Translates to: CNMIRASYKVIALPWKELGFHPP*LCLLAG
Trigger: TCCAGCCAGGAGACATAGTCATGGTGGATGAAAGCC...TAGTTCTTTCCATGGCAAAGCTATTACCTTGTACGATGCTCTAATCATATTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399349.5
ENST00000399352.5
CDS-3UTR TCA 90 bp ACCTTCGCTTTAATTGGGCTCATTCTATACGTCTTTAAAACAGAGATACTGAACGCTCTCTGCACCATGTaGAAGGAGAAGGACCTCTAC +
Preference number: 4 (lower is better)
Translates to: TFALIGLILYVFKTEILNALCTM*KEKDLY
Trigger: GTAGAGGTCCTTCTCCTTTCACATGGTGCAGAGAGC...GTTCAGTATCTCTGTTTTAAAGACGTATAGAATGAGCCCAATTAAAGCGAAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR TCA 90 bp TTTATTGAGAGCTTCCAACTAGTGTTTAAAAGACAAACAGGGCTTCAGCTACAGATACTGAAGTGCAACTaGACGAGGAGGAGAGGTCCT +
Preference number: 4 (lower is better)
Translates to: FIESFQLVFKRQTGLQLQILKCN*TRRRGP
Trigger: AGGACCTCTCCTCCTCGTTCAGTTGCACTTCAGTAT...CTGTAGCTGAAGCCCTGTTTGTCTTTTAAACACTAGTTGGAAGCTCTCAATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR GCA 90 bp AGACTGTGGATATCGTTGATCGTAACGACCTCAGTGGTGTTGTCTACTGATTTTGAAATAGCAACTGGTTaGTGTTTCATGACAGGGGGA +
Preference number: 4 (lower is better)
Translates to: RLWISLIVTTSVVLSTDFEIATG*CFMTGG
Trigger: TCCCCCTGTCATGAAACAGCAACCAGTTGCTATTTC...AAAATCAGTAGACAACACCACTGAGGTCGTTACGATCAACGATATCCACAGTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR GCA 90 bp GGGATTTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAGGAACAGGATAAATTCCTCTaGTGTAAGTTTTCCATCTTG +
Preference number: 4 (lower is better)
Translates to: GISATLEAIMRPVVRTKEQDKFL*CKFSIL
Trigger: CAAGATGGAAAACTTACAGCAGAGGAATTTATCCTG...TTCCTTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAAATCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR GCA 90 bp GGTGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGGCCGTGGGCCAGGATAAATTCCTCTaGTGTAAGTTTTCCATCTTG +
Preference number: 4 (lower is better)
Translates to: GGFLEKEYNFQTACVAVGQDKFL*CKFSIL
Trigger: CAAGATGGAAAACTTACAGCAGAGGAATTTATCCTG...GCCCACGGCCACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR GCA 90 bp TTCTGTTTCAGTCGTTCAGCCTCCATGGACTTTTGCTTCTGGAGTTGTTGCTTAATCAATGAGGTGCATTaGCAGGATAAATTCCTCTGC +
Preference number: 4 (lower is better)
Translates to: FCFSRSASMDFCFWSCCLINEVH*QDKFLC
Trigger: GCAGAGGAATTTATCCTGGCAATGCACCTCATTGAT...TAAGCAACAACTCCAGAAGCAAAAGTCCATGGAGGCTGAACGACTGAAACAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379960.9
CDS-3UTR GCA 90 bp TTTATTGAGAGCTTCCAACTAGTGTTTAAAAGACAAACAGGGCTTCAGCTACAGTCTCCAGTTCCAGGTTaGCACGTTCAAAGTTCTCCC +
Preference number: 4 (lower is better)
Translates to: FIESFQLVFKRQTGLQLQSPVPG*HVQSSP
Trigger: GGGAGAACTTTGAACGTGGCAACCTGGAACTGGAGA...CTGTAGCTGAAGCCCTGTTTGTCTTTTAAACACTAGTTGGAAGCTCTCAATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR GCA 90 bp AGACTGTGGATATCGTTGATCGTAACGACCTCAGTGGTGTTGTCTACTGATTTTGTGCTCTCAATTTCTTaGCTTTGGGTGGTCAATCGA +
Preference number: 4 (lower is better)
Translates to: RLWISLIVTTSVVLSTDFVLSIS*LWVVNR
Trigger: TCGATTGACCACCCAAAGGCAAGAAATTGAGAGCAC...AAAATCAGTAGACAACACCACTGAGGTCGTTACGATCAACGATATCCACAGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR GCA 90 bp CTATGGGATTTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAGATTCCTGTAATTGTTaGTGTAGATGGGTGATTTCG +
Preference number: 4 (lower is better)
Translates to: LWDFSDPRSHNETCSEDKDSCNC*CRWVIS
Trigger: CGAAATCACCCATCTACAGCAACAATTACAGGAATC...TTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAAATCCCATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR GCA 90 bp TTTTTGAAAAATCTCTGTGACCAGCTGCAGGTCATTCACATAGTTCTCCTCGGTGCCTCCATGGACTTTTaGTTCTGGAGTTGTTGCTTA +
Preference number: 4 (lower is better)
Translates to: FLKNLCDQLQVIHIVLLGASMDF*FWSCCL
Trigger: TAAGCAACAACTCCAGAAGCAAAAGTCCATGGAGGC...ACCGAGGAGAACTATGTGAATGACCTGCAGCTGGTCACAGAGATTTTTCAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000381285.8
CDS-3UTR GCA 90 bp GATAAATCTGAGACCGAACAAAAACACAGAGTGCTTTCTCATGTGGCTACAAGGGCCTCCATGGACTTTTaGTTCTGGAGTTGTTGCTTA +
Preference number: 4 (lower is better)
Translates to: DKSETEQKHRVLSHVATRASMDF*FWSCCL
Trigger: TAAGCAACAACTCCAGAAGCAAAAGTCCATGGAGGC...CCTTGTAGCCACATGAGAAAGCACTCTGTGTTTTTGTTCGGTCTCAGATTTATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR GCA 90 bp AGACTGTGGATATCGTTGATCGTAACGACCTCAGTGGTGTTGTCTACTGATTTTGCCTCCATGGACTTTTaGTTCTGGAGTTGTTGCTTA +
Preference number: 4 (lower is better)
Translates to: RLWISLIVTTSVVLSTDFASMDF*FWSCCL
Trigger: TAAGCAACAACTCCAGAAGCAAAAGTCCATGGAGGC...AAAATCAGTAGACAACACCACTGAGGTCGTTACGATCAACGATATCCACAGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR GCA 90 bp GATAAATCTGAGACCGAACAAAAACACAGAGTGCTTTCTCATGTGGCTACAAGGTTCAAAGGGGTACAGTaGCCGGTAATACACCACTTT +
Preference number: 4 (lower is better)
Translates to: DKSETEQKHRVLSHVATRFKGVQ*PVIHHF
Trigger: AAAGTGGTGTATTACCGGGCACTGTACCCCTTTGAA...CCTTGTAGCCACATGAGAAAGCACTCTGTGTTTTTGTTCGGTCTCAGATTTATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR GCA 90 bp CAACCAGATAAATCTGAGACCGAACAAAAACACAGAGTGCTTTCTCATGTGGCTTTCAAAGGGGTACAGTaGCCGGTAATACACCACTTT +
Preference number: 4 (lower is better)
Translates to: QPDKSETEQKHRVLSHVAFKGVQ*PVIHHF
Trigger: AAAGTGGTGTATTACCGGGCACTGTACCCCTTTGAA...AGCCACATGAGAAAGCACTCTGTGTTTTTGTTCGGTCTCAGATTTATCTGGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR GCA 90 bp GTTCAGCCTCCATGGACTTTTGCTTCTGGAGTTGTTGCTTATTGTGTATTTCTCTTTCTCTGCATAGTTTaGAGGGAACCACCCTGTCTT +
Preference number: 4 (lower is better)
Translates to: VQPPWTFASGVVAYCVFLFLCIV*REPPCL
Trigger: AAGACAGGGTGGTTCCCTGCAAACTATGCAGAGAAA...GAGAAATACACAATAAGCAACAACTCCAGAAGCAAAAGTCCATGGAGGCTGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379960.9
CDS-3UTR GCA 90 bp TTACCATTTATTGTACATCTACATGCACTGCCCCATGAGATTACAGATGAAAAAGTAAAGGCGGACCTCTaGCTTAACTGGCCGGCACTT +
Preference number: 4 (lower is better)
Translates to: LPFIVHLHALPHEITDEKVKADL*LNWPAL
Trigger: AAGTGCCGGCCAGTTAAGGCAGAGGTCCGCCTTTAC...TTTTTCATCTGTAATCTCATGGGGCAGTGCATGTAGATGTACAATAAATGGTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000440794.2
CDS-3UTR GCA 90 bp ATCCCTGAATATCAGGTGCAAATCATGGCAGGGCAAATTTCTTTCTTTTTATTTGCGCTTTTTCCCACGTaGTTGCAGCTCTCCTTCCCA +
Preference number: 4 (lower is better)
Translates to: IPEYQVQIMAGQISFFLFALFPT*LQLSFP
Trigger: TGGGAAGGAGAGCTGCAAGCACGTGGGAAAAAGCGC...AAATAAAAAGAAAGAAATTTGCCCTGCCATGATTTGCACCTGATATTCAGGGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000437126.5
CDS-3UTR GCA 90 bp ACCGACAGGGTTTCAACTCGATGCCTTCAACCACGTTCACCATCAACCTTCCAATATCTTGTTACCCGTTaGATAGGCTTCAGTATAAAA +
Preference number: 4 (lower is better)
Translates to: TDRVSTRCLQPRSPSTFQYLVTR*IGFSIK
Trigger: TTTTATACTGAAGCCTATGCAACGGGTAACAAGATA...TTGGAAGGTTGATGGTGAACGTGGTTGAAGGCATCGAGTTGAAACCCTGTCGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381285.8
CDS-3UTR GCA 90 bp TGTCCTACAACAATCAGGATTCAGCACATTCAAGCACAGAACAGGTCACCAGCAGATTGTTTGTCATTGTaGATACCATACGCTACCTAC +
Preference number: 4 (lower is better)
Translates to: CPTTIRIQHIQAQNRSPADCLSL*IPYATY
Trigger: GTAGGTAGCGTATGGTATGCACAATGACAAACAATC...TGCTGGTGACCTGTTCTGTGCTTGAATGTGCTGAATCCTGATTGTTGTAGGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR GCA 90 bp TATGGGATTTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAGACAATGTTTTGGCCCTaGTTCATCAAACCTTTAGAC +
Preference number: 4 (lower is better)
Translates to: YGISATLEAIMRPVVRTKTMFWP*FIKPLD
Trigger: GTCTAAAGGTTTGATGAAGCAGGGCCAAAACATTGT...CTTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAAATCCCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR GCA 90 bp CCAACTCAACCAGATAAATCTGAGACCGAACAAAAACACAGAGTGCTTTCTCATGATACTGAACTCCTCTaGACTTCTATGGTAAGGGGG +
Preference number: 4 (lower is better)
Translates to: PTQPDKSETEQKHRVLSHDTELL*TSMVRG
Trigger: CCCCCTTACCATAGAAGTGCAGAGGAGTTCAGTATC...ATGAGAAAGCACTCTGTGTTTTTGTTCGGTCTCAGATTTATCTGGTTGAGTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CCA 90 bp TTTATTGAGAGCTTCCAACTAGTGTTTAAAAGACAAACAGGGCTTCAGCTACAGTGGAATGGATCCCATTaGCACTGGAGCAACAGCTGT +
Preference number: 4 (lower is better)
Translates to: FIESFQLVFKRQTGLQLQWNGSH*HWSNSC
Trigger: ACAGCTGTTGCTCCAGTGCCAATGGGATCCATTCCA...CTGTAGCTGAAGCCCTGTTTGTCTTTTAAACACTAGTTGGAAGCTCTCAATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CCA 90 bp GATAAATCTGAGACCGAACAAAAACACAGAGTGCTTTCTCATGTGGCTACAAGGAGACATTCCAACAACTaGAATGGATCCCATTGGCAC +
Preference number: 4 (lower is better)
Translates to: DKSETEQKHRVLSHVATRRHSNN*NGSHWH
Trigger: GTGCCAATGGGATCCATTCCAGTTGTTGGAATGTCT...CCTTGTAGCCACATGAGAAAGCACTCTGTGTTTTTGTTCGGTCTCAGATTTATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CCA 90 bp GTTCAGCCTCCATGGACTTTTGCTTCTGGAGTTGTTGCTTATTGTGTATTTCTCAACTCTTTGGCAATGTaGCTGCAGGATGAGCAAATG +
Preference number: 4 (lower is better)
Translates to: VQPPWTFASGVVAYCVFLNSLAM*LQDEQM
Trigger: CATTTGCTCATCCTGCAGCCACATTGCCAAAGAGTT...GAGAAATACACAATAAGCAACAACTCCAGAAGCAAAAGTCCATGGAGGCTGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379960.9
CDS-3UTR CCA 90 bp CAACCAGATAAATCTGAGACCGAACAAAAACACAGAGTGCTTTCTCATGTGGCTAACTCTTTGGCAATGTaGCTGCAGGATGAGCAAATG +
Preference number: 4 (lower is better)
Translates to: QPDKSETEQKHRVLSHVANSLAM*LQDEQM
Trigger: CATTTGCTCATCCTGCAGCCACATTGCCAAAGAGTT...AGCCACATGAGAAAGCACTCTGTGTTTTTGTTCGGTCTCAGATTTATCTGGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CCA 90 bp AGACTGTGGATATCGTTGATCGTAACGACCTCAGTGGTGTTGTCTACTGATTTTAACTCTTTGGCAATGTaGCTGCAGGATGAGCAAATG +
Preference number: 4 (lower is better)
Translates to: RLWISLIVTTSVVLSTDFNSLAM*LQDEQM
Trigger: CATTTGCTCATCCTGCAGCCACATTGCCAAAGAGTT...AAAATCAGTAGACAACACCACTGAGGTCGTTACGATCAACGATATCCACAGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CCA 90 bp ACCTTCGCTTTAATTGGGCTCATTCTATACGTCTTTAAAACAGAGATACTGAACCCACTGGTGGGACACTaGCCACATCAAATGACTGTG +
Preference number: 4 (lower is better)
Translates to: TFALIGLILYVFKTEILNPLVGH*PHQMTV
Trigger: CACAGTCATTTGATGTGGCCAGTGTCCCACCAGTGG...GTTCAGTATCTCTGTTTTAAAGACGTATAGAATGAGCCCAATTAAAGCGAAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CCA 90 bp CCTTTGGGAACGGACCAGGTACGCTTTCTCGCGCTTCTTTTTCTCAGTCTCTATGAGTATCTGTTTTTCTaGAATAAGTCTTCCAAGCAT +
Preference number: 4 (lower is better)
Translates to: PLGTDQVRFLALLFLSLYEYLFF*NKSSKH
Trigger: ATGCTTGGAAGACTTATTCCAGAAAAACAGATACTC...ATAGAGACTGAGAAAAAGAAGCGCGAGAAAGCGTACCTGGTCCGTTCCCAAAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000381285.8
CDS-3UTR CCA 90 bp TGCAATATGATTAGAGCATCGTACAAGGTAATAGCTTTGCCATGGAAAGAACTATCCACTTCATCCAGTTaGTCTCGTAGGTGCTGCCGA +
Preference number: 4 (lower is better)
Translates to: CNMIRASYKVIALPWKELSTSSS*SRRCCR
Trigger: TCGGCAGCACCTACGAGACCAACTGGATGAAGTGGA...TAGTTCTTTCCATGGCAAAGCTATTACCTTGTACGATGCTCTAATCATATTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CCA 90 bp GAATCAGTCACTGGTTTCACTGGAGCGGGAACCTCATTTTCTGGGATTTTCTCTATAGTGATTTCATCATaGCTTCTGGATTCAAAGGGG +
Preference number: 4 (lower is better)
Translates to: ESVTGFTGAGTSFSGIFSIVISS*LLDSKG
Trigger: CCCCTTTGAATCCAGAAGCCATGATGAAATCACTAT...AGAGAAAATCCCAGAAAATGAGGTTCCCGCTCCAGTGAAACCAGTGACTGATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379960.9
ENST00000419241.1
CDS-3UTR CCA 90 bp CATTGTAATTACCATTTATTGTACATCTACATGCACTGCCCCATGAGATTACAGCCGGGTTCTCCAGTTTaGCTTTCATCCACCCATTCC +
Preference number: 4 (lower is better)
Translates to: HCNYHLLYIYMHCPMRLQPGSPV*LSSTHS
Trigger: GGAATGGGTGGATGAAAGCCAAACTGGAGAACCCGG...CTGTAATCTCATGGGGCAGTGCATGTAGATGTACAATAAATGGTAATTACAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440794.2
CDS-3UTR CCA 90 bp AGCTGCTGCGTCCCACCAACAAAAATTCCCTTCCACCTAAAATTCCAGAAGTCATCAAACCAAACAGCTTaGCACATAGTCATAAAGTCC +
Preference number: 4 (lower is better)
Translates to: SCCVPPTKIPFHLKFQKSSNQTA*HIVIKS
Trigger: GGACTTTATGACTATGTGCCAAGCTGTTTGGTTTGA...TGACTTCTGGAATTTTAGGTGGAAGGGAATTTTTGTTGGTGGGACGCAGCAGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CCA 90 bp CAGGATTCAGCACATTCAAGCACAGAACAGGTCACCAGCAACGACTGCTGCTATCTCCATACGGACAATTaGTTACATTACAAATTACAC +
Preference number: 4 (lower is better)
Translates to: QDSAHSSTEQVTSNDCCYLHTDN*LHYKLH
Trigger: GTGTAATTTGTAATGTAACCAATTGTCCGTATGGAG...ATAGCAGCAGTCGTTGCTGGTGACCTGTTCTGTGCTTGAATGTGCTGAATCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CCA 90 bp TTGTTTCATGAAACAGGAAATTGTTTCGGGGCAGGGAGGATTGTCGAGAATGATAGGATGACAGGACTGTaGAGCAACGTATTTCCTGTT +
Preference number: 4 (lower is better)
Translates to: LFHETGNCFGAGRIVENDRMTGL*SNVFPV
Trigger: AACAGGAAATACGTTGCTCCACAGTCCTGTCATCCT...ATCATTCTCGACAATCCTCCCTGCCCCGAAACAATTTCCTGTTTCATGAAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CCA 90 bp AACAGGGCTTCAGCTACAGCATATCTAACACACAAACGGACCATGAGCTCCATTCACCTTCGCTTTAATTaGGCTCATTCTATACGTCTT +
Preference number: 4 (lower is better)
Translates to: NRASATAYLTHKRTMSSIHLRFN*AHSIRL
Trigger: AAGACGTATAGAATGAGCCCAATTAAAGCGAAGGTG...AATGGAGCTCATGGTCCGTTTGTGTGTTAGATATGCTGTAGCTGAAGCCCTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
3UTR CAA 72 bp ATTACACCAGTAAATACAAGGACACTAATCCAGAACTaGCTACATGGCAGGAGCATCTCAAGGATGCTCAAC +
Preference number: 4 (lower is better)
Translates to: ITPVNTRTLIQN*LHGRSISRMLN
Trigger: GTTGAGCATCCTTGAGATGCTCCTGCCATGTAGCAAGTTCTGGATTAGTGTCCTTGTATTTACTGGTGTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR TCA 90 bp CCAACTCAACCAGATAAATCTGAGACCGAACAAAAACACAGAGTGCTTTCTCATAAACTATGGAACTGCTaGTCATGCTTCGCTCTTTCC +
Preference number: 4 (lower is better)
Translates to: PTQPDKSETEQKHRVLSHKLWNC*SCFALS
Trigger: GGAAAGAGCGAAGCATGATCAGCAGTTCCATAGTTT...ATGAGAAAGCACTCTGTGTTTTTGTTCGGTCTCAGATTTATCTGGTTGAGTTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR TCA 90 bp AACAGGGCTTCAGCTACAGCATATCTAACACACAAACGGACCATGAGCTCCATTATGGAAAACTCCACTTaGTCCATTCTTCCATCATTA +
Preference number: 4 (lower is better)
Translates to: NRASATAYLTHKRTMSSIMENST*SILPSL
Trigger: TAATGATGGAAGAATGGATCAAGTGGAGTTTTCCAT...AATGGAGCTCATGGTCCGTTTGTGTGTTAGATATGCTGTAGCTGAAGCCCTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR TCA 90 bp TTTATTGAGAGCTTCCAACTAGTGTTTAAAAGACAAACAGGGCTTCAGCTACAGCATATTGAAGCCAGCTaGGCCTGTGGTAAACTTGAC +
Preference number: 4 (lower is better)
Translates to: FIESFQLVFKRQTGLQLQHIEAS*ACGKLD
Trigger: GTCAAGTTTACCACAGGCTCAGCTGGCTTCAATATG...CTGTAGCTGAAGCCCTGTTTGTCTTTTAAACACTAGTTGGAAGCTCTCAATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR TCA 90 bp TTTATTGAGAGCTTCCAACTAGTGTTTAAAAGACAAACAGGGCTTCAGCTACAGTCCTCTGGTAGCCTCTaGTCTACAGATGTTGAGCTT +
Preference number: 4 (lower is better)
Translates to: FIESFQLVFKRQTGLQLQSSGSL*STDVEL
Trigger: AAGCTCAACATCTGTAGATCAGAGGCTACCAGAGGA...CTGTAGCTGAAGCCCTGTTTGTCTTTTAAACACTAGTTGGAAGCTCTCAATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR TCA 90 bp CAACCAGATAAATCTGAGACCGAACAAAAACACAGAGTGCTTTCTCATGTGGCTCTTCCAAGCATTTGCTaGGATTCCTGTAATTGTTGC +
Preference number: 4 (lower is better)
Translates to: QPDKSETEQKHRVLSHVALPSIC*DSCNCC
Trigger: GCAACAATTACAGGAATCTCAGCAAATGCTTGGAAG...AGCCACATGAGAAAGCACTCTGTGTTTTTGTTCGGTCTCAGATTTATCTGGTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR TCA 90 bp TTTATTGAGAGCTTCCAACTAGTGTTTAAAAGACAAACAGGGCTTCAGCTACAGACTAGCAGGACTCTCTaGAGAACCAGAATCCATGCT +
Preference number: 4 (lower is better)
Translates to: FIESFQLVFKRQTGLQLQTSRTL*RTRIHA
Trigger: AGCATGGATTCTGGTTCTTCAGAGAGTCCTGCTAGT...CTGTAGCTGAAGCCCTGTTTGTCTTTTAAACACTAGTTGGAAGCTCTCAATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR TCA 90 bp TATCCTTGTCGCTTTCTTTCAGTTGGGGTCAACATATCCAAGAGATGTAAGTCTGGGATTCTGAAGCAATaGCAGGACCGTCATAATTGT +
Preference number: 4 (lower is better)
Translates to: YPCRFLSVGVNISKRCKSGILKQ*QDRHNC
Trigger: ACAATTATGACGGTCCTGTCATTGCTTCAGAATCCC...AGACTTACATCTCTTGGATATGTTGACCCCAACTGAAAGAAAGCGACAAGGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381285.8
CDS-3UTR TCA 90 bp GACAGACTCCTTGTTGGCAAGGAGCATTTAATTTCTATGAAATATAGCCCAGGTGGGATTCTGAAGCAATaGCAGGACCGTCATAATTGT +
Preference number: 4 (lower is better)
Translates to: DRLLVGKEHLISMKYSPGGILKQ*QDRHNC
Trigger: ACAATTATGACGGTCCTGTCATTGCTTCAGAATCCC...ACCTGGGCTATATTTCATAGAAATTAAATGCTCCTTGCCAACAAGGAGTCTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR TCA 90 bp AGCTGCTGCGTCCCACCAACAAAAATTCCCTTCCACCTAAAATTCCAGAAGTCAGATAATGACTTTCTGTaGCCATATTCTAAGCATGCT +
Preference number: 4 (lower is better)
Translates to: SCCVPPTKIPFHLKFQKSDNDFL*PYSKHA
Trigger: AGCATGCTTAGAATATGGTCACAGAAAGTCATTATC...TGACTTCTGGAATTTTAGGTGGAAGGGAATTTTTGTTGGTGGGACGCAGCAGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR TCA 90 bp GACAGACTCCTTGTTGGCAAGGAGCATTTAATTTCTATGAAATATAGCCCAGGTTGCTTCTGCCTGGTGTaGGCTAAAGCTCTTTTATCT +
Preference number: 4 (lower is better)
Translates to: DRLLVGKEHLISMKYSPGCFCLV*AKALLS
Trigger: AGATAAAAGAGCTTTAGCTCACACCAGGCAGAAGCA...ACCTGGGCTATATTTCATAGAAATTAAATGCTCCTTGCCAACAAGGAGTCTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR TCA 90 bp TGTCCTACAACAATCAGGATTCAGCACATTCAAGCACAGAACAGGTCACCAGCAACCCTCTCAGATATGTaGTCTGCAAAAATCCATTTT +
Preference number: 4 (lower is better)
Translates to: CPTTIRIQHIQAQNRSPATLSDM*SAKIHF
Trigger: AAAATGGATTTTTGCAGATCACATATCTGAGAGGGT...TGCTGGTGACCTGTTCTGTGCTTGAATGTGCTGAATCCTGATTGTTGTAGGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR TCA 90 bp ATACCAAATGGTGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGAGCAGCCTGGACTTCTaGTCCTTTTCTGGGAATGCA +
Preference number: 4 (lower is better)
Translates to: IPNGGFLEKEYNFQTACVSSLDF*SFSGNA
Trigger: TGCATTCCCAGAAAAGGATCAGAAGTCCAGGCTGCT...CACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCACCATTTGGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR TCA 90 bp ACCTTCGCTTTAATTGGGCTCATTCTATACGTCTTTAAAACAGAGATACTGAACATACTGAAGTGCAACTaGACGAGGAGGAGAGGTCCT +
Preference number: 4 (lower is better)
Translates to: TFALIGLILYVFKTEILNILKCN*TRRRGP
Trigger: AGGACCTCTCCTCCTCGTTCAGTTGCACTTCAGTAT...GTTCAGTATCTCTGTTTTAAAGACGTATAGAATGAGCCCAATTAAAGCGAAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR GCA 90 bp CCAACTCAACCAGATAAATCTGAGACCGAACAAAAACACAGAGTGCTTTCTCATCATACCAAATGCTGGTaGGCTAGAAATAGCAACTGG +
Preference number: 4 (lower is better)
Translates to: PTQPDKSETEQKHRVLSHHTKCW*ARNSNW
Trigger: CCAGTTGCTATTTCTAGCGCACCAGCATTTGGTATG...ATGAGAAAGCACTCTGTGTTTTTGTTCGGTCTCAGATTTATCTGGTTGAGTTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR GCA 90 bp TGCAATATGATTAGAGCATCGTACAAGGTAATAGCTTTGCCATGGAAAGAACTACTTTGGCAATGTGGCTaGAGGATGAGCAAATGCAGG +
Preference number: 4 (lower is better)
Translates to: CNMIRASYKVIALPWKELLWQCG*RMSKCR
Trigger: CCTGCATTTGCTCATCCTGCAGCCACATTGCCAAAG...TAGTTCTTTCCATGGCAAAGCTATTACCTTGTACGATGCTCTAATCATATTGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR GCA 90 bp ACCTTCGCTTTAATTGGGCTCATTCTATACGTCTTTAAAACAGAGATACTGAACCTTTGGCAATGTGGCTaGAGGATGAGCAAATGCAGG +
Preference number: 4 (lower is better)
Translates to: TFALIGLILYVFKTEILNLWQCG*RMSKCR
Trigger: CCTGCATTTGCTCATCCTGCAGCCACATTGCCAAAG...GTTCAGTATCTCTGTTTTAAAGACGTATAGAATGAGCCCAATTAAAGCGAAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR GCA 90 bp GGGATTTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAGGAATGTGGTAAACTTGACTaGATAAGAATAGTTCTTGCT +
Preference number: 4 (lower is better)
Translates to: GISATLEAIMRPVVRTKECGKLD*IRIVLA
Trigger: AGCAAGAACTATTCTTATGCAGTCAAGTTTACCACA...TTCCTTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAAATCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR GCA 90 bp TTGTTTCATGAAACAGGAAATTGTTTCGGGGCAGGGAGGATTGTCGAGAATGATATCAATGAGGTGCATTaGCAGGATAAATTCCTCTGC +
Preference number: 4 (lower is better)
Translates to: LFHETGNCFGAGRIVENDINEVH*QDKFLC
Trigger: GCAGAGGAATTTATCCTGGCAATGCACCTCATTGAT...ATCATTCTCGACAATCCTCCCTGCCCCGAAACAATTTCCTGTTTCATGAAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR GCA 90 bp TGCTGTAGATGGGTGATTTCGGCAATTCTCAACTCTCTAGATTTGTTTGTGCTCGCTACATCAATGAGGTaGATTGCCAGGATAAATTCC +
Preference number: 4 (lower is better)
Translates to: CCRWVISAILNSLDLFVLATSMR*IARINS
Trigger: GGAATTTATCCTGGCAATGCACCTCATTGATGTAGC...GAGCACAAACAAATCTAGAGAGTTGAGAATTGCCGAAATCACCCATCTACAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379960.9
CDS-3UTR GCA 90 bp TTGTTTCATGAAACAGGAAATTGTTTCGGGGCAGGGAGGATTGTCGAGAATGATCACTCAAGTTGTCGTTaGCTTTCAAGTTCCCGTTTT +
Preference number: 4 (lower is better)
Translates to: LFHETGNCFGAGRIVENDHSSCR*LSSSRF
Trigger: AAAACGGGAACTTGAAAGGCAACGACAACTTGAGTG...ATCATTCTCGACAATCCTCCCTGCCCCGAAACAATTTCCTGTTTCATGAAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR GCA 90 bp AGACTGTGGATATCGTTGATCGTAACGACCTCAGTGGTGTTGTCTACTGATTTTCACTCAAGTTGTCGTTaGCTTTCAAGTTCCCGTTTT +
Preference number: 4 (lower is better)
Translates to: RLWISLIVTTSVVLSTDFHSSCR*LSSSRF
Trigger: AAAACGGGAACTTGAAAGGCAACGACAACTTGAGTG...AAAATCAGTAGACAACACCACTGAGGTCGTTACGATCAACGATATCCACAGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR GCA 90 bp GGGATTTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAGGAATGCTTCTGGAGTTGTTaGTTATTGTGTATTTCTCTT +
Preference number: 4 (lower is better)
Translates to: GISATLEAIMRPVVRTKECFWSC*LLCISL
Trigger: AAGAGAAATACACAATAAGCAACAACTCCAGAAGCA...TTCCTTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAAATCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR GCA 90 bp GACAGACTCCTTGTTGGCAAGGAGCATTTAATTTCTATGAAATATAGCCCAGGTTTTCTCTGCATAGTTTaGAGGGAACCACCCTGTCTT +
Preference number: 4 (lower is better)
Translates to: DRLLVGKEHLISMKYSPGFLCIV*REPPCL
Trigger: AAGACAGGGTGGTTCCCTGCAAACTATGCAGAGAAA...ACCTGGGCTATATTTCATAGAAATTAAATGCTCCTTGCCAACAAGGAGTCTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR GCA 90 bp CCAACTCAACCAGATAAATCTGAGACCGAACAAAAACACAGAGTGCTTTCTCATTTTCTCTGCATAGTTTaGAGGGAACCACCCTGTCTT +
Preference number: 4 (lower is better)
Translates to: PTQPDKSETEQKHRVLSHFLCIV*REPPCL
Trigger: AAGACAGGGTGGTTCCCTGCAAACTATGCAGAGAAA...ATGAGAAAGCACTCTGTGTTTTTGTTCGGTCTCAGATTTATCTGGTTGAGTTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR GCA 90 bp TTGTTTCATGAAACAGGAAATTGTTTCGGGGCAGGGAGGATTGTCGAGAATGATTTCATTTATGCTTTCTaGTCGGAGAGTATAGACGCG +
Preference number: 4 (lower is better)
Translates to: LFHETGNCFGAGRIVENDFIYAF*SESIDA
Trigger: CGCGTCTATACTCTCCGAGCAGAAAGCATAAATGAA...ATCATTCTCGACAATCCTCCCTGCCCCGAAACAATTTCCTGTTTCATGAAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR GCA 90 bp GGTTCAAGATACACAGGAAGAGCAATTTGTACTGATGTTGCTACTGGTTTAAAGGCAGCTTTGATTTTCTaGACCCAGGCAGTCCTTTCA +
Preference number: 4 (lower is better)
Translates to: GSRYTGRAICTDVATGLKAALIF*TQAVLS
Trigger: TGAAAGGACTGCCTGGGTGCAGAAAATCAAAGCTGC...CTTTAAACCAGTAGCAACATCAGTACAAATTGCTCTTCCTGTGTATCTTGAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR GCA 90 bp TATGGGATTTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAGCTTTCTGGCATAGGATaGTCTAAACTTGTAAACAAG +
Preference number: 4 (lower is better)
Translates to: YGISATLEAIMRPVVRTKLSGIG*SKLVNK
Trigger: CTTGTTTACAAGTTTAGAGCATCCTATGCCAGAAAG...CTTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAAATCCCATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR GCA 90 bp TATGGGATTTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAGAAGAAAGAAAGAAAATaGCCCCCATTTGATCAAGCA +
Preference number: 4 (lower is better)
Translates to: YGISATLEAIMRPVVRTKKKERK*PPFDQA
Trigger: TGCTTGATCAAATGGGGGGCATTTTCTTTCTTTCTT...CTTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAAATCCCATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR GCA 90 bp GACAGACTCCTTGTTGGCAAGGAGCATTTAATTTCTATGAAATATAGCCCAGGTCACCCTCAGTCTTTCTaGTGCTTTACGATATCACCT +
Preference number: 4 (lower is better)
Translates to: DRLLVGKEHLISMKYSPGHPQSF*CFTISP
Trigger: AGGTGATATCGTAAAGCAGCAGAAAGACTGAGGGTG...ACCTGGGCTATATTTCATAGAAATTAAATGCTCCTTGCCAACAAGGAGTCTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR GCA 90 bp GATAAATCTGAGACCGAACAAAAACACAGAGTGCTTTCTCATGTGGCTACAAGGCAACATATGATTCATTaGTGGCTTGGGTCCATGTCT +
Preference number: 4 (lower is better)
Translates to: DKSETEQKHRVLSHVATRQHMIH*WLGSMS
Trigger: AGACATGGACCCAAGCCAGCAATGAATCATATGTTG...CCTTGTAGCCACATGAGAAAGCACTCTGTGTTTTTGTTCGGTCTCAGATTTATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR GCA 90 bp TGCAATATGATTAGAGCATCGTACAAGGTAATAGCTTTGCCATGGAAAGAACTACTGCCCCATTTTCTGTaGTGTGAGCAGCAGGCATTT +
Preference number: 4 (lower is better)
Translates to: CNMIRASYKVIALPWKELLPHFL*CEQQAF
Trigger: AAATGCCTGCTGCTCACAGCACAGAAAATGGGGCAG...TAGTTCTTTCCATGGCAAAGCTATTACCTTGTACGATGCTCTAATCATATTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CCA 90 bp GGAATCAGAACTGAATCCACGCAACAATACACCAGTGTGTTTTCATTGACATATGCCACCAAAAGGTGTTaGAAACTGAGCCATGGTTCT +
Preference number: 4 (lower is better)
Translates to: GIRTESTQQYTSVFSLTYATKRC*KLSHGS
Trigger: AGAACCATGGCTCAGTTTCCAACACCTTTTGGTGGC...ATATGTCAATGAAAACACACTGGTGTATTGTTGCGTGGATTCAGTTCTGATTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000381318.8
CDS-3UTR CCA 90 bp CCAACTCAACCAGATAAATCTGAGACCGAACAAAAACACAGAGTGCTTTCTCATAACTCTTTGGCAATGTaGCTGCAGGATGAGCAAATG +
Preference number: 4 (lower is better)
Translates to: PTQPDKSETEQKHRVLSHNSLAM*LQDEQM
Trigger: CATTTGCTCATCCTGCAGCCACATTGCCAAAGAGTT...ATGAGAAAGCACTCTGTGTTTTTGTTCGGTCTCAGATTTATCTGGTTGAGTTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CCA 90 bp GATAAATCTGAGACCGAACAAAAACACAGAGTGCTTTCTCATGTGGCTACAAGGAGAATAGTTCTTGCTTaGGGACCTGTTAAGTGTCCA +
Preference number: 4 (lower is better)
Translates to: DKSETEQKHRVLSHVATRRIVLA*GPVKCP
Trigger: TGGACACTTAACAGGTCCCCAAGCAAGAACTATTCT...CCTTGTAGCCACATGAGAAAGCACTCTGTGTTTTTGTTCGGTCTCAGATTTATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CCA 90 bp GATAAATCTGAGACCGAACAAAAACACAGAGTGCTTTCTCATGTGGCTACAAGGTCAATTTCTTGCCTTTaGGTGGTCAATCGACATCTG +
Preference number: 4 (lower is better)
Translates to: DKSETEQKHRVLSHVATRSISCL*VVNRHL
Trigger: CAGATGTCGATTGACCACCCAAAGGCAAGAAATTGA...CCTTGTAGCCACATGAGAAAGCACTCTGTGTTTTTGTTCGGTCTCAGATTTATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CCA 90 bp GTTTCTAAACTCACACCAAGGACTGGGCATTGTAGGCCAAGAAGTCTACTTGGGGAGTATCTGTTTTTCTaGAATAAGTCTTCCAAGCAT +
Preference number: 4 (lower is better)
Translates to: VSKLTPRTGHCRPRSLLGEYLFF*NKSSKH
Trigger: ATGCTTGGAAGACTTATTCCAGAAAAACAGATACTC...CCCAAGTAGACTTCTTGGCCTACAATGCCCAGTCCTTGGTGTGAGTTTAGAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000381318.8
CDS-3UTR CCA 90 bp TGTCCTACAACAATCAGGATTCAGCACATTCAAGCACAGAACAGGTCACCAGCAATGGACTTTTGCTTCTaGAGTTGTTGCTTATTGTGT +
Preference number: 4 (lower is better)
Translates to: CPTTIRIQHIQAQNRSPAMDFCF*SCCLLC
Trigger: ACACAATAAGCAACAACTCCAGAAGCAAAAGTCCAT...TGCTGGTGACCTGTTCTGTGCTTGAATGTGCTGAATCCTGATTGTTGTAGGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000381318.8
CDS-3UTR CCA 90 bp CTATGGGATTTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAATGGACTTTTGCTTCTaGAGTTGTTGCTTATTGTGT +
Preference number: 4 (lower is better)
Translates to: LWDFSDPRSHNETCSEDKMDFCF*SCCLLC
Trigger: ACACAATAAGCAACAACTCCAGAAGCAAAAGTCCAT...TTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAAATCCCATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CCA 90 bp TTTATTGAGAGCTTCCAACTAGTGTTTAAAAGACAAACAGGGCTTCAGCTACAGTTCGTGGAGTTTTCTTaGTCTCTGATGCTCGTCCTC +
Preference number: 4 (lower is better)
Translates to: FIESFQLVFKRQTGLQLQFVEFS*SLMLVL
Trigger: GAGGACGAGCATCAGAGACCAAGAAAACTCCACGAA...CTGTAGCTGAAGCCCTGTTTGTCTTTTAAACACTAGTTGGAAGCTCTCAATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CCA 90 bp TTTATTGAGAGCTTCCAACTAGTGTTTAAAAGACAAACAGGGCTTCAGCTACAGGACAGCTGGCTTAGCTaGTTCTTGGTGTTGATGGAA +
Preference number: 4 (lower is better)
Translates to: FIESFQLVFKRQTGLQLQDSWLS*FLVLME
Trigger: TTCCATCAACACCAAGAACCAGCTAAGCCAGCTGTC...CTGTAGCTGAAGCCCTGTTTGTCTTTTAAACACTAGTTGGAAGCTCTCAATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CCA 90 bp CAACCAGATAAATCTGAGACCGAACAAAAACACAGAGTGCTTTCTCATGTGGCTACTATGTCTCCTGGCTaGATAGTGATTTCATCATGG +
Preference number: 4 (lower is better)
Translates to: QPDKSETEQKHRVLSHVATMSPG*IVISSW
Trigger: CCATGATGAAATCACTATCCAGCCAGGAGACATAGT...AGCCACATGAGAAAGCACTCTGTGTTTTTGTTCGGTCTCAGATTTATCTGGTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CCA 90 bp AGACTGTGGATATCGTTGATCGTAACGACCTCAGTGGTGTTGTCTACTGATTTTCATGACTATGTCTCCTaGCTGGATAGTGATTTCATC +
Preference number: 4 (lower is better)
Translates to: RLWISLIVTTSVVLSTDFHDYVS*LDSDFI
Trigger: GATGAAATCACTATCCAGCCAGGAGACATAGTCATG...AAAATCAGTAGACAACACCACTGAGGTCGTTACGATCAACGATATCCACAGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CCA 90 bp CCAAATGGTGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGGCCCATGACTATGTCTCCTaGCTGGATAGTGATTTCATC +
Preference number: 4 (lower is better)
Translates to: PNGGFLEKEYNFQTACVAHDYVS*LDSDFI
Trigger: GATGAAATCACTATCCAGCCAGGAGACATAGTCATG...GGCCACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCACCATTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CCA 90 bp CCAACTCAACCAGATAAATCTGAGACCGAACAAAAACACAGAGTGCTTTCTCATCCAGTTATCCGTTTCTaGTTTCTCATTCGTGCTGGT +
Preference number: 4 (lower is better)
Translates to: PTQPDKSETEQKHRVLSHPVIRF*FLIRAG
Trigger: ACCAGCACGAATGAGAAACCAGAAACGGATAACTGG...ATGAGAAAGCACTCTGTGTTTTTGTTCGGTCTCAGATTTATCTGGTTGAGTTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CCA 90 bp GGTTCAAGATACACAGGAAGAGCAATTTGTACTGATGTTGCTACTGGTTTAAAGAGTTGGAATTCCACTTaGGGTTCAGAGTGTCCTGGA +
Preference number: 4 (lower is better)
Translates to: GSRYTGRAICTDVATGLKSWNST*GSECPG
Trigger: TCCAGGACACTCTGAACCCCAAGTGGAATTCCAACT...CTTTAAACCAGTAGCAACATCAGTACAAATTGCTCTTCCTGTGTATCTTGAACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CCA 90 bp TTGTTTCATGAAACAGGAAATTGTTTCGGGGCAGGGAGGATTGTCGAGAATGATTATGAGTGGGTGACCTaGGACCTAAAACGATTGTTT +
Preference number: 4 (lower is better)
Translates to: LFHETGNCFGAGRIVENDYEWVT*DLKRLF
Trigger: AAACAATCGTTTTAGGTCCCAGGTCACCCACTCATA...ATCATTCTCGACAATCCTCCCTGCCCCGAAACAATTTCCTGTTTCATGAAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CCA 90 bp GGTGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGGCCGTGGGCCAACATTTAACAGCATaGCCTCTTACATACCATATA +
Preference number: 4 (lower is better)
Translates to: GGFLEKEYNFQTACVAVGQHLTA*PLTYHI
Trigger: TATATGGTATGTAAGAGGCCATGCTGTTAAATGTTG...GCCCACGGCCACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CCA 90 bp ACCTTCGCTTTAATTGGGCTCATTCTATACGTCTTTAAAACAGAGATACTGAACCCGGGTTCTCCAGTTTaGCTTTCATCCACCATGACT +
Preference number: 4 (lower is better)
Translates to: TFALIGLILYVFKTEILNPGSPV*LSSTMT
Trigger: AGTCATGGTGGATGAAAGCCAAACTGGAGAACCCGG...GTTCAGTATCTCTGTTTTAAAGACGTATAGAATGAGCCCAATTAAAGCGAAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399349.5
ENST00000399352.5
3UTR CAA 72 bp CTGTGGATATCGTTGATCGTAACGACCTCAGTGGTGTaGTCTACTGATTTTATGCTATGCAAACACGCAAAA +
Preference number: 4 (lower is better)
Translates to: LWISLIVTTSVV*STDFMLCKHAK
Trigger: TTTTGCGTGTTTGCATAGCATAAAATCAGTAGACAACACCACTGAGGTCGTTACGATCAACGATATCCACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
3UTR CAA 72 bp CATGTAACAGAGACTAAAAAGAGACTGTGGATATCGTaGATCGTAACGACCTCAGTGGTGTTGTCTACTGAT +
Preference number: 4 (lower is better)
Translates to: HVTETKKRLWIS*IVTTSVVLSTD
Trigger: ATCAGTAGACAACACCACTGAGGTCGTTACGATCAACGATATCCACAGTCTCTTTTTAGTCTCTGTTACATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR TCA 90 bp TGCAATATGATTAGAGCATCGTACAAGGTAATAGCTTTGCCATGGAAAGAACTAAGAAAGATTCCATATTaGAGCCAGCTGAGCCTGTGG +
Preference number: 4 (lower is better)
Translates to: CNMIRASYKVIALPWKELRKIPY*SQLSLW
Trigger: CCACAGGCTCAGCTGGCTTCAATATGGAATCTTTCT...TAGTTCTTTCCATGGCAAAGCTATTACCTTGTACGATGCTCTAATCATATTGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR TCA 90 bp TTTATTGAGAGCTTCCAACTAGTGTTTAAAAGACAAACAGGGCTTCAGCTACAGCAGATGTTGAGCTTATaGCAGATATACCACTGCCAG +
Preference number: 4 (lower is better)
Translates to: FIESFQLVFKRQTGLQLQQMLSL*QIYHCQ
Trigger: CTGGCAGTGGTATATCTGTCATAAGCTCAACATCTG...CTGTAGCTGAAGCCCTGTTTGTCTTTTAAACACTAGTTGGAAGCTCTCAATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR TCA 90 bp AGACTGTGGATATCGTTGATCGTAACGACCTCAGTGGTGTTGTCTACTGATTTTCTGATCTACAGATGTTaGGCTTATGACAGATATACC +
Preference number: 4 (lower is better)
Translates to: RLWISLIVTTSVVLSTDFLIYRC*AYDRYT
Trigger: GGTATATCTGTCATAAGCTCAACATCTGTAGATCAG...AAAATCAGTAGACAACACCACTGAGGTCGTTACGATCAACGATATCCACAGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR TCA 90 bp ACCTTCGCTTTAATTGGGCTCATTCTATACGTCTTTAAAACAGAGATACTGAACTCCTCTGGTAGCCTCTaGTCTACAGATGTTGAGCTT +
Preference number: 4 (lower is better)
Translates to: TFALIGLILYVFKTEILNSSGSL*STDVEL
Trigger: AAGCTCAACATCTGTAGATCAGAGGCTACCAGAGGA...GTTCAGTATCTCTGTTTTAAAGACGTATAGAATGAGCCCAATTAAAGCGAAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR TCA 90 bp TTTATTGAGAGCTTCCAACTAGTGTTTAAAAGACAAACAGGGCTTCAGCTACAGGTTGCTGTAGATGGGTaGTTTCGGCAATTCTCAACT +
Preference number: 4 (lower is better)
Translates to: FIESFQLVFKRQTGLQLQVAVDG*FRQFST
Trigger: AGTTGAGAATTGCCGAAATCACCCATCTACAGCAAC...CTGTAGCTGAAGCCCTGTTTGTCTTTTAAACACTAGTTGGAAGCTCTCAATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR TCA 90 bp TTTATTGAGAGCTTCCAACTAGTGTTTAAAAGACAAACAGGGCTTCAGCTACAGTTATGGGCCCTGAAATaGGTTTCACGTAAGACTTGG +
Preference number: 4 (lower is better)
Translates to: FIESFQLVFKRQTGLQLQLWALK*VSRKTW
Trigger: CCAAGTCTTACGTGAAACTCATTTCAGGGCCCATAA...CTGTAGCTGAAGCCCTGTTTGTCTTTTAAACACTAGTTGGAAGCTCTCAATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR TCA 90 bp TTTATTGAGAGCTTCCAACTAGTGTTTAAAAGACAAACAGGGCTTCAGCTACAGAGTTCCAGAGCCCTCTaGATCTTTAAGCCTCACATA +
Preference number: 4 (lower is better)
Translates to: FIESFQLVFKRQTGLQLQSSRAL*IFKPHI
Trigger: TATGTGAGGCTTAAAGATTCAGAGGGCTCTGGAACT...CTGTAGCTGAAGCCCTGTTTGTCTTTTAAACACTAGTTGGAAGCTCTCAATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381291.8
ENST00000399352.5
CDS-3UTR TCA 90 bp AGACTGTGGATATCGTTGATCGTAACGACCTCAGTGGTGTTGTCTACTGATTTTCACACAAACGGACCATaGGCTCCATTTCATATTAAT +
Preference number: 4 (lower is better)
Translates to: RLWISLIVTTSVVLSTDFHTNGP*APFHIN
Trigger: ATTAATATGAAATGGAGCTCATGGTCCGTTTGTGTG...AAAATCAGTAGACAACACCACTGAGGTCGTTACGATCAACGATATCCACAGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR GCA 90 bp TGCAATATGATTAGAGCATCGTACAAGGTAATAGCTTTGCCATGGAAAGAACTAACCTCCCATACCAAATaGTGGTGCGCTAGAAATAGC +
Preference number: 4 (lower is better)
Translates to: CNMIRASYKVIALPWKELTSHTK*WCARNS
Trigger: GCTATTTCTAGCGCACCAGCATTTGGTATGGGAGGT...TAGTTCTTTCCATGGCAAAGCTATTACCTTGTACGATGCTCTAATCATATTGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR GCA 90 bp ACCTTCGCTTTAATTGGGCTCATTCTATACGTCTTTAAAACAGAGATACTGAACACCTCCCATACCAAATaGTGGTGCGCTAGAAATAGC +
Preference number: 4 (lower is better)
Translates to: TFALIGLILYVFKTEILNTSHTK*WCARNS
Trigger: GCTATTTCTAGCGCACCAGCATTTGGTATGGGAGGT...GTTCAGTATCTCTGTTTTAAAGACGTATAGAATGAGCCCAATTAAAGCGAAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR GCA 90 bp GACAGACTCCTTGTTGGCAAGGAGCATTTAATTTCTATGAAATATAGCCCAGGTATCAATGAGGTGCATTaGCAGGATAAATTCCTCTGC +
Preference number: 4 (lower is better)
Translates to: DRLLVGKEHLISMKYSPGINEVH*QDKFLC
Trigger: GCAGAGGAATTTATCCTGGCAATGCACCTCATTGAT...ACCTGGGCTATATTTCATAGAAATTAAATGCTCCTTGCCAACAAGGAGTCTGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR GCA 90 bp CCAACTCAACCAGATAAATCTGAGACCGAACAAAAACACAGAGTGCTTTCTCATGCTACATCAATGAGGTaGATTGCCAGGATAAATTCC +
Preference number: 4 (lower is better)
Translates to: PTQPDKSETEQKHRVLSHATSMR*IARINS
Trigger: GGAATTTATCCTGGCAATGCACCTCATTGATGTAGC...ATGAGAAAGCACTCTGTGTTTTTGTTCGGTCTCAGATTTATCTGGTTGAGTTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR GCA 90 bp CCAACTCAACCAGATAAATCTGAGACCGAACAAAAACACAGAGTGCTTTCTCATCACTCAAGTTGTCGTTaGCTTTCAAGTTCCCGTTTT +
Preference number: 4 (lower is better)
Translates to: PTQPDKSETEQKHRVLSHHSSCR*LSSSRF
Trigger: AAAACGGGAACTTGAAAGGCAACGACAACTTGAGTG...ATGAGAAAGCACTCTGTGTTTTTGTTCGGTCTCAGATTTATCTGGTTGAGTTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR GCA 90 bp TGCTGTAGATGGGTGATTTCGGCAATTCTCAACTCTCTAGATTTGTTTGTGCTCGATTCCTGTAATTGTTaGTGTAGATGGGTGATTTCG +
Preference number: 4 (lower is better)
Translates to: CCRWVISAILNSLDLFVLDSCNC*CRWVIS
Trigger: CGAAATCACCCATCTACAGCAACAATTACAGGAATC...GAGCACAAACAAATCTAGAGAGTTGAGAATTGCCGAAATCACCCATCTACAGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379960.9
CDS-3UTR GCA 90 bp GATAAATCTGAGACCGAACAAAAACACAGAGTGCTTTCTCATGTGGCTACAAGGGATTCCTGTAATTGTTaGTGTAGATGGGTGATTTCG +
Preference number: 4 (lower is better)
Translates to: DKSETEQKHRVLSHVATRDSCNC*CRWVIS
Trigger: CGAAATCACCCATCTACAGCAACAATTACAGGAATC...CCTTGTAGCCACATGAGAAAGCACTCTGTGTTTTTGTTCGGTCTCAGATTTATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR GCA 90 bp AACAGGGCTTCAGCTACAGCATATCTAACACACAAACGGACCATGAGCTCCATTTGCTTCTGGAGTTGTTaGTTATTGTGTATTTCTCTT +
Preference number: 4 (lower is better)
Translates to: NRASATAYLTHKRTMSSICFWSC*LLCISL
Trigger: AAGAGAAATACACAATAAGCAACAACTCCAGAAGCA...AATGGAGCTCATGGTCCGTTTGTGTGTTAGATATGCTGTAGCTGAAGCCCTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR GCA 90 bp TTTATTGAGAGCTTCCAACTAGTGTTTAAAAGACAAACAGGGCTTCAGCTACAGGCCTCCATGGACTTTTaGTTCTGGAGTTGTTGCTTA +
Preference number: 4 (lower is better)
Translates to: FIESFQLVFKRQTGLQLQASMDF*FWSCCL
Trigger: TAAGCAACAACTCCAGAAGCAAAAGTCCATGGAGGC...CTGTAGCTGAAGCCCTGTTTGTCTTTTAAACACTAGTTGGAAGCTCTCAATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR GCA 90 bp TTTATTGAGAGCTTCCAACTAGTGTTTAAAAGACAAACAGGGCTTCAGCTACAGTTTCTCTGCATAGTTTaGAGGGAACCACCCTGTCTT +
Preference number: 4 (lower is better)
Translates to: FIESFQLVFKRQTGLQLQFLCIV*REPPCL
Trigger: AAGACAGGGTGGTTCCCTGCAAACTATGCAGAGAAA...CTGTAGCTGAAGCCCTGTTTGTCTTTTAAACACTAGTTGGAAGCTCTCAATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR GCA 90 bp CCAACTCAACCAGATAAATCTGAGACCGAACAAAAACACAGAGTGCTTTCTCATTTCTGGGATTTTCTCTaGATAGTTTGCAGGGAACCA +
Preference number: 4 (lower is better)
Translates to: PTQPDKSETEQKHRVLSHFWDFL*IVCREP
Trigger: TGGTTCCCTGCAAACTATGCAGAGAAAATCCCAGAA...ATGAGAAAGCACTCTGTGTTTTTGTTCGGTCTCAGATTTATCTGGTTGAGTTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR GCA 90 bp ATCCCTGAATATCAGGTGCAAATCATGGCAGGGCAAATTTCTTTCTTTTTATTTTTTTTCCCACGTGCTTaGAGCTCTCCTTCCCACCAT +
Preference number: 4 (lower is better)
Translates to: IPEYQVQIMAGQISFFLFFFPRA*SSPSHH
Trigger: ATGGTGGGAAGGAGAGCTGCAAGCACGTGGGAAAAA...AAATAAAAAGAAAGAAATTTGCCCTGCCATGATTTGCACCTGATATTCAGGGAT
41% GC, longest homopolymer 8 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000437126.5
CDS-3UTR GCA 90 bp TATGGGATTTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAGTATCTTGTTACCCGTTaGATAGGCTTCAGTATAAAA +
Preference number: 4 (lower is better)
Translates to: YGISATLEAIMRPVVRTKYLVTR*IGFSIK
Trigger: TTTTATACTGAAGCCTATGCAACGGGTAACAAGATA...CTTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAAATCCCATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR GCA 90 bp TTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAGGAAAACACGACTTAAAGTTAGTTTaGCATCAAAAGCAATGGCAA +
Preference number: 4 (lower is better)
Translates to: FSDPRSHNETCSEDKGKHDLKLV*HQKQWQ
Trigger: TTGCCATTGCTTTTGATGGCAAACTAACTTTAAGTC...GTGTTTTCCTTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR GCA 90 bp TGTCCTACAACAATCAGGATTCAGCACATTCAAGCACAGAACAGGTCACCAGCACATAGTGAGGATTATTaGTCAATGTATATGGAGATG +
Preference number: 4 (lower is better)
Translates to: CPTTIRIQHIQAQNRSPAHSEDY*SMYMEM
Trigger: CATCTCCATATACATTGAGCAATAATCCTCACTATG...TGCTGGTGACCTGTTCTGTGCTTGAATGTGCTGAATCCTGATTGTTGTAGGACA
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR GCA 90 bp CCAACTCAACCAGATAAATCTGAGACCGAACAAAAACACAGAGTGCTTTCTCATCAACATATGATTCATTaGTGGCTTGGGTCCATGTCT +
Preference number: 4 (lower is better)
Translates to: PTQPDKSETEQKHRVLSHQHMIH*WLGSMS
Trigger: AGACATGGACCCAAGCCAGCAATGAATCATATGTTG...ATGAGAAAGCACTCTGTGTTTTTGTTCGGTCTCAGATTTATCTGGTTGAGTTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR GCA 90 bp TGCAATATGATTAGAGCATCGTACAAGGTAATAGCTTTGCCATGGAAAGAACTAGATACTGAACTCCTCTaGACTTCTATGGTAAGGGGG +
Preference number: 4 (lower is better)
Translates to: CNMIRASYKVIALPWKELDTELL*TSMVRG
Trigger: CCCCCTTACCATAGAAGTGCAGAGGAGTTCAGTATC...TAGTTCTTTCCATGGCAAAGCTATTACCTTGTACGATGCTCTAATCATATTGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CCA 90 bp ACCTTCGCTTTAATTGGGCTCATTCTATACGTCTTTAAAACAGAGATACTGAACTTCCAACAACTGGAATaGATCCCATTGGCACTGGAG +
Preference number: 4 (lower is better)
Translates to: TFALIGLILYVFKTEILNFQQLE*IPLALE
Trigger: CTCCAGTGCCAATGGGATCCATTCCAGTTGTTGGAA...GTTCAGTATCTCTGTTTTAAAGACGTATAGAATGAGCCCAATTAAAGCGAAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CCA 90 bp TGCAATATGATTAGAGCATCGTACAAGGTAATAGCTTTGCCATGGAAAGAACTATTCCAACAACTGGAATaGATCCCATTGGCACTGGAG +
Preference number: 4 (lower is better)
Translates to: CNMIRASYKVIALPWKELFQQLE*IPLALE
Trigger: CTCCAGTGCCAATGGGATCCATTCCAGTTGTTGGAA...TAGTTCTTTCCATGGCAAAGCTATTACCTTGTACGATGCTCTAATCATATTGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CCA 90 bp TTTATTGAGAGCTTCCAACTAGTGTTTAAAAGACAAACAGGGCTTCAGCTACAGAGACATTCCAACAACTaGAATGGATCCCATTGGCAC +
Preference number: 4 (lower is better)
Translates to: FIESFQLVFKRQTGLQLQRHSNN*NGSHWH
Trigger: GTGCCAATGGGATCCATTCCAGTTGTTGGAATGTCT...CTGTAGCTGAAGCCCTGTTTGTCTTTTAAACACTAGTTGGAAGCTCTCAATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CCA 90 bp GACAGACTCCTTGTTGGCAAGGAGCATTTAATTTCTATGAAATATAGCCCAGGTAGAATAGTTCTTGCTTaGGGACCTGTTAAGTGTCCA +
Preference number: 4 (lower is better)
Translates to: DRLLVGKEHLISMKYSPGRIVLA*GPVKCP
Trigger: TGGACACTTAACAGGTCCCCAAGCAAGAACTATTCT...ACCTGGGCTATATTTCATAGAAATTAAATGCTCCTTGCCAACAAGGAGTCTGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CCA 90 bp AGACTGTGGATATCGTTGATCGTAACGACCTCAGTGGTGTTGTCTACTGATTTTAATTGTTGCTGTAGATaGGTGATTTCGGCAATTCTC +
Preference number: 4 (lower is better)
Translates to: RLWISLIVTTSVVLSTDFNCCCR*VISAIL
Trigger: GAGAATTGCCGAAATCACCCATCTACAGCAACAATT...AAAATCAGTAGACAACACCACTGAGGTCGTTACGATCAACGATATCCACAGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CCA 90 bp AACAGGGCTTCAGCTACAGCATATCTAACACACAAACGGACCATGAGCTCCATTGAGTATCTGTTTTTCTaGAATAAGTCTTCCAAGCAT +
Preference number: 4 (lower is better)
Translates to: NRASATAYLTHKRTMSSIEYLFF*NKSSKH
Trigger: ATGCTTGGAAGACTTATTCCAGAAAAACAGATACTC...AATGGAGCTCATGGTCCGTTTGTGTGTTAGATATGCTGTAGCTGAAGCCCTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CCA 90 bp ATACCAAATGGTGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGGTCGTTCAGCCTCCATaGACTTTTGCTTCTGGAGTT +
Preference number: 4 (lower is better)
Translates to: IPNGGFLEKEYNFQTACVVVQPP*TFASGV
Trigger: AACTCCAGAAGCAAAAGTCCATGGAGGCTGAACGAC...CACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCACCATTTGGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CCA 90 bp ACCTTCGCTTTAATTGGGCTCATTCTATACGTCTTTAAAACAGAGATACTGAACGACAGCTGGCTTAGCTaGTTCTTGGTGTTGATGGAA +
Preference number: 4 (lower is better)
Translates to: TFALIGLILYVFKTEILNDSWLS*FLVLME
Trigger: TTCCATCAACACCAAGAACCAGCTAAGCCAGCTGTC...GTTCAGTATCTCTGTTTTAAAGACGTATAGAATGAGCCCAATTAAAGCGAAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CCA 90 bp ATACCAAATGGTGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGGACAGCTGGCTTAGCTaGTTCTTGGTGTTGATGGAA +
Preference number: 4 (lower is better)
Translates to: IPNGGFLEKEYNFQTACVDSWLS*FLVLME
Trigger: TTCCATCAACACCAAGAACCAGCTAAGCCAGCTGTC...CACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCACCATTTGGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CCA 90 bp TGCTGTAGATGGGTGATTTCGGCAATTCTCAACTCTCTAGATTTGTTTGTGCTCATAGTGATTTCATCATaGCTTCTGGATTCAAAGGGG +
Preference number: 4 (lower is better)
Translates to: CCRWVISAILNSLDLFVLIVISS*LLDSKG
Trigger: CCCCTTTGAATCCAGAAGCCATGATGAAATCACTAT...GAGCACAAACAAATCTAGAGAGTTGAGAATTGCCGAAATCACCCATCTACAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379960.9
CDS-3UTR CCA 90 bp ACCTTCGCTTTAATTGGGCTCATTCTATACGTCTTTAAAACAGAGATACTGAACAGTCACTGGTTTCACTaGAGCGGGAACCTCATTTTC +
Preference number: 4 (lower is better)
Translates to: TFALIGLILYVFKTEILNSHWFH*SGNLIF
Trigger: GAAAATGAGGTTCCCGCTCCAGTGAAACCAGTGACT...GTTCAGTATCTCTGTTTTAAAGACGTATAGAATGAGCCCAATTAAAGCGAAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CCA 90 bp TGCAATATGATTAGAGCATCGTACAAGGTAATAGCTTTGCCATGGAAAGAACTAAGTCACTGGTTTCACTaGAGCGGGAACCTCATTTTC +
Preference number: 4 (lower is better)
Translates to: CNMIRASYKVIALPWKELSHWFH*SGNLIF
Trigger: GAAAATGAGGTTCCCGCTCCAGTGAAACCAGTGACT...TAGTTCTTTCCATGGCAAAGCTATTACCTTGTACGATGCTCTAATCATATTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CCA 90 bp ACCTTCGCTTTAATTGGGCTCATTCTATACGTCTTTAAAACAGAGATACTGAACGTTTCACGTAAGACTTaGGGAACCAACCCTTCTGAC +
Preference number: 4 (lower is better)
Translates to: TFALIGLILYVFKTEILNVSRKT*GTNPSD
Trigger: GTCAGAAGGGTTGGTTCCCCAAGTCTTACGTGAAAC...GTTCAGTATCTCTGTTTTAAAGACGTATAGAATGAGCCCAATTAAAGCGAAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CCA 90 bp GGAATCAGAACTGAATCCACGCAACAATACACCAGTGTGTTTTCATTGACATATGTGACAATGAGCTCGTaGATGTATCCTTGTCGCTTT +
Preference number: 4 (lower is better)
Translates to: GIRTESTQQYTSVFSLTYVTMSS*MYPCRF
Trigger: AAAGCGACAAGGATACATCCACGAGCTCATTGTCAC...ATATGTCAATGAAAACACACTGGTGTATTGTTGCGTGGATTCAGTTCTGATTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000381318.8
CDS-3UTR CCA 90 bp ATACCAAATGGTGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGTTCCTTTTCACGCCTTaGGGATCTAGGACATGGCTT +
Preference number: 4 (lower is better)
Translates to: IPNGGFLEKEYNFQTACVFLFTP*GSRTWL
Trigger: AAGCCATGTCCTAGATCCCCAAGGCGTGAAAAGGAA...CACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCACCATTTGGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CCA 90 bp CCAAATGGTGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGGCCCTTCTGTCTTTCATGTaGACTAAGTTTCCATGCCTA +
Preference number: 4 (lower is better)
Translates to: PNGGFLEKEYNFQTACVALLSFM*TKFPCL
Trigger: TAGGCATGGAAACTTAGTCCACATGAAAGACAGAAG...GGCCACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCACCATTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR TCA 90 bp GATAAATCTGAGACCGAACAAAAACACAGAGTGCTTTCTCATGTGGCTACAAGGATGGAAAACTCCACTTaGTCCATTCTTCCATCATTA +
Preference number: 4 (lower is better)
Translates to: DKSETEQKHRVLSHVATRMENST*SILPSL
Trigger: TAATGATGGAAGAATGGATCAAGTGGAGTTTTCCAT...CCTTGTAGCCACATGAGAAAGCACTCTGTGTTTTTGTTCGGTCTCAGATTTATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR TCA 90 bp CCAAATGGTGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGGCCATGGAAAACTCCACTTaGTCCATTCTTCCATCATTA +
Preference number: 4 (lower is better)
Translates to: PNGGFLEKEYNFQTACVAMENST*SILPSL
Trigger: TAATGATGGAAGAATGGATCAAGTGGAGTTTTCCAT...GGCCACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCACCATTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR TCA 90 bp AGAAACAGACATTATGGAAACCGAAAATCAAAAGGAAGTATGCAACAACCTGAAAGTGCAGAGGGTAGCTaGTATCCTTGTAGCTTCAGT +
Preference number: 4 (lower is better)
Translates to: RNRHYGNRKSKGSMQQPESAEGS*YPCSFS
Trigger: ACTGAAGCTACAAGGATATCAGCTACCCTCTGCACT...TTCAGGTTGTTGCATACTTCCTTTTGATTTTCGGTTTCCATAATGTCTGTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456489.1
CDS-3UTR TCA 90 bp ATACCAAATGGTGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGCAGATGTTGAGCTTATaGCAGATATACCACTGCCAG +
Preference number: 4 (lower is better)
Translates to: IPNGGFLEKEYNFQTACVQMLSL*QIYHCQ
Trigger: CTGGCAGTGGTATATCTGTCATAAGCTCAACATCTG...CACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCACCATTTGGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR TCA 90 bp ACCTTCGCTTTAATTGGGCTCATTCTATACGTCTTTAAAACAGAGATACTGAACCTTCCTTATGGGCCCTaGAATGAGTTTCACGTAAGA +
Preference number: 4 (lower is better)
Translates to: TFALIGLILYVFKTEILNLPYGP*NEFHVR
Trigger: TCTTACGTGAAACTCATTTCAGGGCCCATAAGGAAG...GTTCAGTATCTCTGTTTTAAAGACGTATAGAATGAGCCCAATTAAAGCGAAGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR TCA 90 bp ATCCCTGAATATCAGGTGCAAATCATGGCAGGGCAAATTTCTTTCTTTTTATTTACTAGCAGGACTCTCTaGAGAACCAGAATCCATGCT +
Preference number: 4 (lower is better)
Translates to: IPEYQVQIMAGQISFFLFTSRTL*RTRIHA
Trigger: AGCATGGATTCTGGTTCTTCAGAGAGTCCTGCTAGT...AAATAAAAAGAAAGAAATTTGCCCTGCCATGATTTGCACCTGATATTCAGGGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437126.5
CDS-3UTR TCA 90 bp GGTTCAAGATACACAGGAAGAGCAATTTGTACTGATGTTGCTACTGGTTTAAAGCAAAAAGTCCACTTCTaGACACAGCTTTATCTGGTG +
Preference number: 4 (lower is better)
Translates to: GSRYTGRAICTDVATGLKQKVHF*TQLYLV
Trigger: CACCAGATAAAGCTGTGTTCAGAAGTGGACTTTTTG...CTTTAAACCAGTAGCAACATCAGTACAAATTGCTCTTCCTGTGTATCTTGAACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR TCA 90 bp CAACCAGATAAATCTGAGACCGAACAAAAACACAGAGTGCTTTCTCATGTGGCTTTAAAACAGAGATACTaGACTCCTCTGCACTTCTAT +
Preference number: 4 (lower is better)
Translates to: QPDKSETEQKHRVLSHVALKQRY*TPLHFY
Trigger: ATAGAAGTGCAGAGGAGTTCAGTATCTCTGTTTTAA...AGCCACATGAGAAAGCACTCTGTGTTTTTGTTCGGTCTCAGATTTATCTGGTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR TCA 90 bp CAACCAGATAAATCTGAGACCGAACAAAAACACAGAGTGCTTTCTCATGTGGCTAGTGGTGTTGTCTACTaGTTTTATGCTATGCAAACA +
Preference number: 4 (lower is better)
Translates to: QPDKSETEQKHRVLSHVASGVVY*FYAMQT
Trigger: TGTTTGCATAGCATAAAATCAGTAGACAACACCACT...AGCCACATGAGAAAGCACTCTGTGTTTTTGTTCGGTCTCAGATTTATCTGGTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR TCA 90 bp CCAACTCAACCAGATAAATCTGAGACCGAACAAAAACACAGAGTGCTTTCTCATAGCAGGCATTTTTATTaGGAGCTTCCAACTAGTGTT +
Preference number: 4 (lower is better)
Translates to: PTQPDKSETEQKHRVLSHSRHFY*ELPTSV
Trigger: AACACTAGTTGGAAGCTCTCAATAAAAATGCCTGCT...ATGAGAAAGCACTCTGTGTTTTTGTTCGGTCTCAGATTTATCTGGTTGAGTTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR GCA 90 bp ACCTTCGCTTTAATTGGGCTCATTCTATACGTCTTTAAAACAGAGATACTGAACGAAATAGCAACTGGTTaGTGTTTCATGACAGGGGGA +
Preference number: 4 (lower is better)
Translates to: TFALIGLILYVFKTEILNEIATG*CFMTGG
Trigger: TCCCCCTGTCATGAAACAGCAACCAGTTGCTATTTC...GTTCAGTATCTCTGTTTTAAAGACGTATAGAATGAGCCCAATTAAAGCGAAGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR GCA 90 bp ATACCAAATGGTGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGCATACCAAATGCTGGTaGGCTAGAAATAGCAACTGG +
Preference number: 4 (lower is better)
Translates to: IPNGGFLEKEYNFQTACVHTKCW*ARNSNW
Trigger: CCAGTTGCTATTTCTAGCGCACCAGCATTTGGTATG...CACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCACCATTTGGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381318.8
ENST00000399367.7
CDS-3UTR GCA 90 bp GTTCAGCCTCCATGGACTTTTGCTTCTGGAGTTGTTGCTTATTGTGTATTTCTCCAGGATAAATTCCTCTaGTGTAAGTTTTCCATCTTG +
Preference number: 4 (lower is better)
Translates to: VQPPWTFASGVVAYCVFLQDKFL*CKFSIL
Trigger: CAAGATGGAAAACTTACAGCAGAGGAATTTATCCTG...GAGAAATACACAATAAGCAACAACTCCAGAAGCAAAAGTCCATGGAGGCTGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379960.9
CDS-3UTR GCA 90 bp TTTATTGAGAGCTTCCAACTAGTGTTTAAAAGACAAACAGGGCTTCAGCTACAGATCAATGAGGTGCATTaGCAGGATAAATTCCTCTGC +
Preference number: 4 (lower is better)
Translates to: FIESFQLVFKRQTGLQLQINEVH*QDKFLC
Trigger: GCAGAGGAATTTATCCTGGCAATGCACCTCATTGAT...CTGTAGCTGAAGCCCTGTTTGTCTTTTAAACACTAGTTGGAAGCTCTCAATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR GCA 90 bp ATACCAAATGGTGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGTTCAAAGGGGTACAGTaGCCGGTAATACACCACTTT +
Preference number: 4 (lower is better)
Translates to: IPNGGFLEKEYNFQTACVFKGVQ*PVIHHF
Trigger: AAAGTGGTGTATTACCGGGCACTGTACCCCTTTGAA...CACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCACCATTTGGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR GCA 90 bp ACCTTCGCTTTAATTGGGCTCATTCTATACGTCTTTAAAACAGAGATACTGAACTTCAAAGGGGTACAGTaGCCGGTAATACACCACTTT +
Preference number: 4 (lower is better)
Translates to: TFALIGLILYVFKTEILNFKGVQ*PVIHHF
Trigger: AAAGTGGTGTATTACCGGGCACTGTACCCCTTTGAA...GTTCAGTATCTCTGTTTTAAAGACGTATAGAATGAGCCCAATTAAAGCGAAGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR GCA 90 bp ACCTTCGCTTTAATTGGGCTCATTCTATACGTCTTTAAAACAGAGATACTGAACTTTCTCTGCATAGTTTaGAGGGAACCACCCTGTCTT +
Preference number: 4 (lower is better)
Translates to: TFALIGLILYVFKTEILNFLCIV*REPPCL
Trigger: AAGACAGGGTGGTTCCCTGCAAACTATGCAGAGAAA...GTTCAGTATCTCTGTTTTAAAGACGTATAGAATGAGCCCAATTAAAGCGAAGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR GCA 90 bp ATACCAAATGGTGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGGTCACCAGCAACGACTaGTGCTATGAAATATCACAG +
Preference number: 4 (lower is better)
Translates to: IPNGGFLEKEYNFQTACVVTSND*CYEISQ
Trigger: CTGTGATATTTCATAGCAGCAGTCGTTGCTGGTGAC...CACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCACCATTTGGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000381318.8
CDS-3UTR GCA 90 bp GACAGACTCCTTGTTGGCAAGGAGCATTTAATTTCTATGAAATATAGCCCAGGTATGAGAATATTAACATaGAAACAAAACACGGCCCCC +
Preference number: 4 (lower is better)
Translates to: DRLLVGKEHLISMKYSPGMRILT*KQNTAP
Trigger: GGGGGCCGTGTTTTGTTTGCATGTTAATATTCTCAT...ACCTGGGCTATATTTCATAGAAATTAAATGCTCCTTGCCAACAAGGAGTCTGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR GCA 90 bp TTTATTGAGAGCTTCCAACTAGTGTTTAAAAGACAAACAGGGCTTCAGCTACAGCAACATATGATTCATTaGTGGCTTGGGTCCATGTCT +
Preference number: 4 (lower is better)
Translates to: FIESFQLVFKRQTGLQLQQHMIH*WLGSMS
Trigger: AGACATGGACCCAAGCCAGCAATGAATCATATGTTG...CTGTAGCTGAAGCCCTGTTTGTCTTTTAAACACTAGTTGGAAGCTCTCAATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR GCA 90 bp GATAAATCTGAGACCGAACAAAAACACAGAGTGCTTTCTCATGTGGCTACAAGGAACAAAAACACAGAGTaGTTTCTCATGTGGCTACAA +
Preference number: 4 (lower is better)
Translates to: DKSETEQKHRVLSHVATRNKNTE*FLMWLQ
Trigger: TTGTAGCCACATGAGAAAGCACTCTGTGTTTTTGTT...CCTTGTAGCCACATGAGAAAGCACTCTGTGTTTTTGTTCGGTCTCAGATTTATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CCA 90 bp TTTATTGAGAGCTTCCAACTAGTGTTTAAAAGACAAACAGGGCTTCAGCTACAGTCAATTTCTTGCCTTTaGGTGGTCAATCGACATCTG +
Preference number: 4 (lower is better)
Translates to: FIESFQLVFKRQTGLQLQSISCL*VVNRHL
Trigger: CAGATGTCGATTGACCACCCAAAGGCAAGAAATTGA...CTGTAGCTGAAGCCCTGTTTGTCTTTTAAACACTAGTTGGAAGCTCTCAATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CCA 90 bp CCAAATGGTGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGGCCATGGACTTTTGCTTCTaGAGTTGTTGCTTATTGTGT +
Preference number: 4 (lower is better)
Translates to: PNGGFLEKEYNFQTACVAMDFCF*SCCLLC
Trigger: ACACAATAAGCAACAACTCCAGAAGCAAAAGTCCAT...GGCCACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCACCATTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CCA 90 bp AGACTGTGGATATCGTTGATCGTAACGACCTCAGTGGTGTTGTCTACTGATTTTATGGACTTTTGCTTCTaGAGTTGTTGCTTATTGTGT +
Preference number: 4 (lower is better)
Translates to: RLWISLIVTTSVVLSTDFMDFCF*SCCLLC
Trigger: ACACAATAAGCAACAACTCCAGAAGCAAAAGTCCAT...AAAATCAGTAGACAACACCACTGAGGTCGTTACGATCAACGATATCCACAGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CCA 90 bp TTTATTGAGAGCTTCCAACTAGTGTTTAAAAGACAAACAGGGCTTCAGCTACAGTGCAGAAATGGTAAGTaGACCTTTTTCTGCAGTGGA +
Preference number: 4 (lower is better)
Translates to: FIESFQLVFKRQTGLQLQCRNGK*TFFCSG
Trigger: TCCACTGCAGAAAAAGGTCCACTTACCATTTCTGCA...CTGTAGCTGAAGCCCTGTTTGTCTTTTAAACACTAGTTGGAAGCTCTCAATAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CCA 90 bp CCAACTCAACCAGATAAATCTGAGACCGAACAAAAACACAGAGTGCTTTCTCATATAGTGATTTCATCATaGCTTCTGGATTCAAAGGGG +
Preference number: 4 (lower is better)
Translates to: PTQPDKSETEQKHRVLSHIVISS*LLDSKG
Trigger: CCCCTTTGAATCCAGAAGCCATGATGAAATCACTAT...ATGAGAAAGCACTCTGTGTTTTTGTTCGGTCTCAGATTTATCTGGTTGAGTTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CCA 90 bp CCAACTCAACCAGATAAATCTGAGACCGAACAAAAACACAGAGTGCTTTCTCATGGGAACCTCATTTTCTaGGATTTTCTCTGCATAGTT +
Preference number: 4 (lower is better)
Translates to: PTQPDKSETEQKHRVLSHGNLIF*DFLCIV
Trigger: AACTATGCAGAGAAAATCCCAGAAAATGAGGTTCCC...ATGAGAAAGCACTCTGTGTTTTTGTTCGGTCTCAGATTTATCTGGTTGAGTTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CCA 90 bp TTACCATTTATTGTACATCTACATGCACTGCCCCATGAGATTACAGATGAAAAAAGTCACTGGTTTCACTaGAGCGGGAACCTCATTTTC +
Preference number: 4 (lower is better)
Translates to: LPFIVHLHALPHEITDEKSHWFH*SGNLIF
Trigger: GAAAATGAGGTTCCCGCTCCAGTGAAACCAGTGACT...TTTTTCATCTGTAATCTCATGGGGCAGTGCATGTAGATGTACAATAAATGGTAA
40% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000440794.2
CDS-3UTR CCA 90 bp CATTGTAATTACCATTTATTGTACATCTACATGCACTGCCCCATGAGATTACAGCCAGTTATCCGTTTCTaGTTTCTCATTCGTGCTGGT +
Preference number: 4 (lower is better)
Translates to: HCNYHLLYIYMHCPMRLQPVIRF*FLIRAG
Trigger: ACCAGCACGAATGAGAAACCAGAAACGGATAACTGG...CTGTAATCTCATGGGGCAGTGCATGTAGATGTACAATAAATGGTAATTACAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440794.2
CDS-3UTR CCA 90 bp ATCCCTGAATATCAGGTGCAAATCATGGCAGGGCAAATTTCTTTCTTTTTATTTGTTTCACGTAAGACTTaGGGAACCAACCCTTCTGAC +
Preference number: 4 (lower is better)
Translates to: IPEYQVQIMAGQISFFLFVSRKT*GTNPSD
Trigger: GTCAGAAGGGTTGGTTCCCCAAGTCTTACGTGAAAC...AAATAAAAAGAAAGAAATTTGCCCTGCCATGATTTGCACCTGATATTCAGGGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437126.5
CDS-3UTR CCA 90 bp ATACCAAATGGTGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGGGTTATGCTTCTGCCTaGTGTGAGCTAAAGCTCTTT +
Preference number: 4 (lower is better)
Translates to: IPNGGFLEKEYNFQTACVGYASA*CELKLF
Trigger: AAAGAGCTTTAGCTCACACCAGGCAGAAGCATAACC...CACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCACCATTTGGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CCA 90 bp ATACCAAATGGTGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGGTGTGTCTTGGTGTCTaGGTTTTAATGCTCCCAAGA +
Preference number: 4 (lower is better)
Translates to: IPNGGFLEKEYNFQTACVVCLGV*VLMLPR
Trigger: TCTTGGGAGCATTAAAACCCAGACACCAAGACACAC...CACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCACCATTTGGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CCA 90 bp AGACTGTGGATATCGTTGATCGTAACGACCTCAGTGGTGTTGTCTACTGATTTTACTAAAAAGAGACTGTaGATATCGTTGATCGTAACG +
Preference number: 4 (lower is better)
Translates to: RLWISLIVTTSVVLSTDFTKKRL*ISLIVT
Trigger: CGTTACGATCAACGATATCCACAGTCTCTTTTTAGT...AAAATCAGTAGACAACACCACTGAGGTCGTTACGATCAACGATATCCACAGTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CCA 90 bp CTGCATCTCTGCTTTCATTTTGATTACTTTACATCCCAGGGTTCAAATGTGAACATTACCTCCAAATGCTaGTGCGCTAGAAATAGCAAC +
Preference number: 4 (lower is better)
Translates to: LHLCFHFDYFTSQGSNVNITSKC*CARNSN
Trigger: GTTGCTATTTCTAGCGCACCAGCATTTGGAGGTAAT...GTTCACATTTGAACCCTGGGATGTAAAGTAATCAAAATGAAAGCAGAGATGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456489.1
3UTR CAA 72 bp TTCTTTCTGTTTCAGTCGTTCAGCCTCCATGGACTTTaGCTTCTGGAGTTGTTGCTTATTGTGTATTTCTCT +
Preference number: 4 (lower is better)
Translates to: FFLFQSFSLHGL*LLELLLIVYFS
Trigger: AGAGAAATACACAATAAGCAACAACTCCAGAAGCAAAAGTCCATGGAGGCTGAACGACTGAAACAGAAAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379960.9
CDS-3UTR TCA 90 bp ACCTTCGCTTTAATTGGGCTCATTCTATACGTCTTTAAAACAGAGATACTGAACAAAGGTGTTGGAAACTaGGCCATGGTTCTGTTACTT +
Preference number: 4 (lower is better)
Translates to: TFALIGLILYVFKTEILNKGVGN*AMVLLL
Trigger: AAGTAACAGAACCATGGCTCAGTTTCCAACACCTTT...GTTCAGTATCTCTGTTTTAAAGACGTATAGAATGAGCCCAATTAAAGCGAAGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR TCA 90 bp ATCCCTGAATATCAGGTGCAAATCATGGCAGGGCAAATTTCTTTCTTTTTATTTTTATGGGCCCTGAAATaGGTTTCACGTAAGACTTGG +
Preference number: 4 (lower is better)
Translates to: IPEYQVQIMAGQISFFLFLWALK*VSRKTW
Trigger: CCAAGTCTTACGTGAAACTCATTTCAGGGCCCATAA...AAATAAAAAGAAAGAAATTTGCCCTGCCATGATTTGCACCTGATATTCAGGGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000437126.5
CDS-3UTR TCA 90 bp ATCCCTGAATATCAGGTGCAAATCATGGCAGGGCAAATTTCTTTCTTTTTATTTCTTCCTTATGGGCCCTaGAATGAGTTTCACGTAAGA +
Preference number: 4 (lower is better)
Translates to: IPEYQVQIMAGQISFFLFLPYGP*NEFHVR
Trigger: TCTTACGTGAAACTCATTTCAGGGCCCATAAGGAAG...AAATAAAAAGAAAGAAATTTGCCCTGCCATGATTTGCACCTGATATTCAGGGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437126.5
CDS-3UTR TCA 90 bp ATACCAAATGGTGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGTTTGAAAAATCTCTGTaGCCAGCTGCAGGTCATTCA +
Preference number: 4 (lower is better)
Translates to: IPNGGFLEKEYNFQTACVFEKSL*PAAGHS
Trigger: TGAATGACCTGCAGCTGGTCACAGAGATTTTTCAAA...CACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCACCATTTGGTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR TCA 90 bp GGAATCAGAACTGAATCCACGCAACAATACACCAGTGTGTTTTCATTGACATATTACCTACATGAACAATaGTGTCCAACATTAACACGC +
Preference number: 4 (lower is better)
Translates to: GIRTESTQQYTSVFSLTYYLHEQ*CPTLTR
Trigger: GCGTGTTAATGTTGGACATCATTGTTCATGTAGGTA...ATATGTCAATGAAAACACACTGGTGTATTGTTGCGTGGATTCAGTTCTGATTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR TCA 90 bp TGCAATATGATTAGAGCATCGTACAAGGTAATAGCTTTGCCATGGAAAGAACTATCAACAAGGTACAGCTaGTACACACAAACAAGCACA +
Preference number: 4 (lower is better)
Translates to: CNMIRASYKVIALPWKELSTRYS*YTQTST
Trigger: TGTGCTTGTTTGTGTGTATCAGCTGTACCTTGTTGA...TAGTTCTTTCCATGGCAAAGCTATTACCTTGTACGATGCTCTAATCATATTGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR TCA 90 bp CCAACTCAACCAGATAAATCTGAGACCGAACAAAAACACAGAGTGCTTTCTCATAGTGGTGTTGTCTACTaGTTTTATGCTATGCAAACA +
Preference number: 4 (lower is better)
Translates to: PTQPDKSETEQKHRVLSHSGVVY*FYAMQT
Trigger: TGTTTGCATAGCATAAAATCAGTAGACAACACCACT...ATGAGAAAGCACTCTGTGTTTTTGTTCGGTCTCAGATTTATCTGGTTGAGTTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR GCA 90 bp TTGTTTCATGAAACAGGAAATTGTTTCGGGGCAGGGAGGATTGTCGAGAATGATTGTGGTAAACTTGACTaGATAAGAATAGTTCTTGCT +
Preference number: 4 (lower is better)
Translates to: LFHETGNCFGAGRIVENDCGKLD*IRIVLA
Trigger: AGCAAGAACTATTCTTATGCAGTCAAGTTTACCACA...ATCATTCTCGACAATCCTCCCTGCCCCGAAACAATTTCCTGTTTCATGAAACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR GCA 90 bp GATAAATCTGAGACCGAACAAAAACACAGAGTGCTTTCTCATGTGGCTACAAGGTGTGGTAAACTTGACTaGATAAGAATAGTTCTTGCT +
Preference number: 4 (lower is better)
Translates to: DKSETEQKHRVLSHVATRCGKLD*IRIVLA
Trigger: AGCAAGAACTATTCTTATGCAGTCAAGTTTACCACA...CCTTGTAGCCACATGAGAAAGCACTCTGTGTTTTTGTTCGGTCTCAGATTTATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR GCA 90 bp TGCAATATGATTAGAGCATCGTACAAGGTAATAGCTTTGCCATGGAAAGAACTAGCTACATCAATGAGGTaGATTGCCAGGATAAATTCC +
Preference number: 4 (lower is better)
Translates to: CNMIRASYKVIALPWKELATSMR*IARINS
Trigger: GGAATTTATCCTGGCAATGCACCTCATTGATGTAGC...TAGTTCTTTCCATGGCAAAGCTATTACCTTGTACGATGCTCTAATCATATTGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR GCA 90 bp ACCTTCGCTTTAATTGGGCTCATTCTATACGTCTTTAAAACAGAGATACTGAACGCTACATCAATGAGGTaGATTGCCAGGATAAATTCC +
Preference number: 4 (lower is better)
Translates to: TFALIGLILYVFKTEILNATSMR*IARINS
Trigger: GGAATTTATCCTGGCAATGCACCTCATTGATGTAGC...GTTCAGTATCTCTGTTTTAAAGACGTATAGAATGAGCCCAATTAAAGCGAAGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR GCA 90 bp ATACCAAATGGTGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGGCTACATCAATGAGGTaGATTGCCAGGATAAATTCC +
Preference number: 4 (lower is better)
Translates to: IPNGGFLEKEYNFQTACVATSMR*IARINS
Trigger: GGAATTTATCCTGGCAATGCACCTCATTGATGTAGC...CACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCACCATTTGGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR GCA 90 bp TGCAATATGATTAGAGCATCGTACAAGGTAATAGCTTTGCCATGGAAAGAACTACACTCAAGTTGTCGTTaGCTTTCAAGTTCCCGTTTT +
Preference number: 4 (lower is better)
Translates to: CNMIRASYKVIALPWKELHSSCR*LSSSRF
Trigger: AAAACGGGAACTTGAAAGGCAACGACAACTTGAGTG...TAGTTCTTTCCATGGCAAAGCTATTACCTTGTACGATGCTCTAATCATATTGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR GCA 90 bp TTGTTTCATGAAACAGGAAATTGTTTCGGGGCAGGGAGGATTGTCGAGAATGATTGCTTCTGGAGTTGTTaGTTATTGTGTATTTCTCTT +
Preference number: 4 (lower is better)
Translates to: LFHETGNCFGAGRIVENDCFWSC*LLCISL
Trigger: AAGAGAAATACACAATAAGCAACAACTCCAGAAGCA...ATCATTCTCGACAATCCTCCCTGCCCCGAAACAATTTCCTGTTTCATGAAACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR GCA 90 bp TTACCATTTATTGTACATCTACATGCACTGCCCCATGAGATTACAGATGAAAAATTTCTCTGCATAGTTTaGAGGGAACCACCCTGTCTT +
Preference number: 4 (lower is better)
Translates to: LPFIVHLHALPHEITDEKFLCIV*REPPCL
Trigger: AAGACAGGGTGGTTCCCTGCAAACTATGCAGAGAAA...TTTTTCATCTGTAATCTCATGGGGCAGTGCATGTAGATGTACAATAAATGGTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000440794.2
CDS-3UTR GCA 90 bp ATCCCTGAATATCAGGTGCAAATCATGGCAGGGCAAATTTCTTTCTTTTTATTTTCCCTGAATATCAGGTaGAAATCATGGCAGGGCAAA +
Preference number: 4 (lower is better)
Translates to: IPEYQVQIMAGQISFFLFSLNIR*KSWQGK
Trigger: TTTGCCCTGCCATGATTTGCACCTGATATTCAGGGA...AAATAAAAAGAAAGAAATTTGCCCTGCCATGATTTGCACCTGATATTCAGGGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000437126.5
CDS-3UTR CCA 90 bp ACCTTCGCTTTAATTGGGCTCATTCTATACGTCTTTAAAACAGAGATACTGAACAGAATAGTTCTTGCTTaGGGACCTGTTAAGTGTCCA +
Preference number: 4 (lower is better)
Translates to: TFALIGLILYVFKTEILNRIVLA*GPVKCP
Trigger: TGGACACTTAACAGGTCCCCAAGCAAGAACTATTCT...GTTCAGTATCTCTGTTTTAAAGACGTATAGAATGAGCCCAATTAAAGCGAAGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CCA 90 bp GGTTCAAGATACACAGGAAGAGCAATTTGTACTGATGTTGCTACTGGTTTAAAGAATTGTTGCTGTAGATaGGTGATTTCGGCAATTCTC +
Preference number: 4 (lower is better)
Translates to: GSRYTGRAICTDVATGLKNCCCR*VISAIL
Trigger: GAGAATTGCCGAAATCACCCATCTACAGCAACAATT...CTTTAAACCAGTAGCAACATCAGTACAAATTGCTCTTCCTGTGTATCTTGAACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CCA 90 bp TGCAATATGATTAGAGCATCGTACAAGGTAATAGCTTTGCCATGGAAAGAACTATGCAGAAATGGTAAGTaGACCTTTTTCTGCAGTGGA +
Preference number: 4 (lower is better)
Translates to: CNMIRASYKVIALPWKELCRNGK*TFFCSG
Trigger: TCCACTGCAGAAAAAGGTCCACTTACCATTTCTGCA...TAGTTCTTTCCATGGCAAAGCTATTACCTTGTACGATGCTCTAATCATATTGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CCA 90 bp TTTATTGAGAGCTTCCAACTAGTGTTTAAAAGACAAACAGGGCTTCAGCTACAGATAGTGATTTCATCATaGCTTCTGGATTCAAAGGGG +
Preference number: 4 (lower is better)
Translates to: FIESFQLVFKRQTGLQLQIVISS*LLDSKG
Trigger: CCCCTTTGAATCCAGAAGCCATGATGAAATCACTAT...CTGTAGCTGAAGCCCTGTTTGTCTTTTAAACACTAGTTGGAAGCTCTCAATAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CCA 90 bp ACCTTCGCTTTAATTGGGCTCATTCTATACGTCTTTAAAACAGAGATACTGAACACTATGTCTCCTGGCTaGATAGTGATTTCATCATGG +
Preference number: 4 (lower is better)
Translates to: TFALIGLILYVFKTEILNTMSPG*IVISSW
Trigger: CCATGATGAAATCACTATCCAGCCAGGAGACATAGT...GTTCAGTATCTCTGTTTTAAAGACGTATAGAATGAGCCCAATTAAAGCGAAGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CCA 90 bp TTTATTGAGAGCTTCCAACTAGTGTTTAAAAGACAAACAGGGCTTCAGCTACAGGGGAACCTCATTTTCTaGGATTTTCTCTGCATAGTT +
Preference number: 4 (lower is better)
Translates to: FIESFQLVFKRQTGLQLQGNLIF*DFLCIV
Trigger: AACTATGCAGAGAAAATCCCAGAAAATGAGGTTCCC...CTGTAGCTGAAGCCCTGTTTGTCTTTTAAACACTAGTTGGAAGCTCTCAATAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CCA 90 bp TTTTTGAAAAATCTCTGTGACCAGCTGCAGGTCATTCACATAGTTCTCCTCGGTATTTTTAATGATCAGTaGGTATCTTGTTACCCGTTG +
Preference number: 4 (lower is better)
Translates to: FLKNLCDQLQVIHIVLLGIFNDQ*VSCYPL
Trigger: CAACGGGTAACAAGATACCCACTGATCATTAAAAAT...ACCGAGGAGAACTATGTGAATGACCTGCAGCTGGTCACAGAGATTTTTCAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000381285.8
3UTR CAA 72 bp CCGGAAACTGAGCTGATTATCATCCACAGGACATTTTaGTTGCAGTTTCTCATCTGTACACATGTATTTACA +
Preference number: 4 (lower is better)
Translates to: PETELIIIHRTF*LQFLICTHVFT
Trigger: TGTAAATACATGTGTACAGATGAGAAACTGCAACAAAAATGTCCTGTGGATGATAATCAGCTCAGTTTCCGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR TCA 90 bp TGCAATATGATTAGAGCATCGTACAAGGTAATAGCTTTGCCATGGAAAGAACTACTGATCTACAGATGTTaGGCTTATGACAGATATACC +
Preference number: 4 (lower is better)
Translates to: CNMIRASYKVIALPWKELLIYRC*AYDRYT
Trigger: GGTATATCTGTCATAAGCTCAACATCTGTAGATCAG...TAGTTCTTTCCATGGCAAAGCTATTACCTTGTACGATGCTCTAATCATATTGCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR TCA 90 bp TGCAATATGATTAGAGCATCGTACAAGGTAATAGCTTTGCCATGGAAAGAACTAAGCAGGCATTTTTATTaGGAGCTTCCAACTAGTGTT +
Preference number: 4 (lower is better)
Translates to: CNMIRASYKVIALPWKELSRHFY*ELPTSV
Trigger: AACACTAGTTGGAAGCTCTCAATAAAAATGCCTGCT...TAGTTCTTTCCATGGCAAAGCTATTACCTTGTACGATGCTCTAATCATATTGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR GCA 90 bp TTTATTGAGAGCTTCCAACTAGTGTTTAAAAGACAAACAGGGCTTCAGCTACAGCAGGATAAATTCCTCTaGTGTAAGTTTTCCATCTTG +
Preference number: 4 (lower is better)
Translates to: FIESFQLVFKRQTGLQLQQDKFL*CKFSIL
Trigger: CAAGATGGAAAACTTACAGCAGAGGAATTTATCCTG...CTGTAGCTGAAGCCCTGTTTGTCTTTTAAACACTAGTTGGAAGCTCTCAATAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR GCA 90 bp TGCAATATGATTAGAGCATCGTACAAGGTAATAGCTTTGCCATGGAAAGAACTAGATTCCTGTAATTGTTaGTGTAGATGGGTGATTTCG +
Preference number: 4 (lower is better)
Translates to: CNMIRASYKVIALPWKELDSCNC*CRWVIS
Trigger: CGAAATCACCCATCTACAGCAACAATTACAGGAATC...TAGTTCTTTCCATGGCAAAGCTATTACCTTGTACGATGCTCTAATCATATTGCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR GCA 90 bp TATCCTTGTCGCTTTCTTTCAGTTGGGGTCAACATATCCAAGAGATGTAAGTCTTGCTTCTGGAGTTGTTaGTTATTGTGTATTTCTCTT +
Preference number: 4 (lower is better)
Translates to: YPCRFLSVGVNISKRCKSCFWSC*LLCISL
Trigger: AAGAGAAATACACAATAAGCAACAACTCCAGAAGCA...AGACTTACATCTCTTGGATATGTTGACCCCAACTGAAAGAAAGCGACAAGGATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381285.8
CDS-3UTR GCA 90 bp TTACCATTTATTGTACATCTACATGCACTGCCCCATGAGATTACAGATGAAAAATTCTGGGATTTTCTCTaGATAGTTTGCAGGGAACCA +
Preference number: 4 (lower is better)
Translates to: LPFIVHLHALPHEITDEKFWDFL*IVCREP
Trigger: TGGTTCCCTGCAAACTATGCAGAGAAAATCCCAGAA...TTTTTCATCTGTAATCTCATGGGGCAGTGCATGTAGATGTACAATAAATGGTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000440794.2
CDS-3UTR GCA 90 bp TTACCATTTATTGTACATCTACATGCACTGCCCCATGAGATTACAGATGAAAAATACATCTACATGCACTaGCCCATGAGATTACAGATG +
Preference number: 4 (lower is better)
Translates to: LPFIVHLHALPHEITDEKYIYMH*PMRLQM
Trigger: CATCTGTAATCTCATGGGGCAGTGCATGTAGATGTA...TTTTTCATCTGTAATCTCATGGGGCAGTGCATGTAGATGTACAATAAATGGTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000440794.2
CDS-3UTR GCA 90 bp TTATGCACAAGGAGAAACAGACATTATGGAAACCGAAAATCAAAAGGAAGTATGAGAATTACCTCCAAATaGTGGTGCGCTAGAAATAGC +
Preference number: 4 (lower is better)
Translates to: LCTRRNRHYGNRKSKGSMRITSK*WCARNS
Trigger: GCTATTTCTAGCGCACCAGCATTTGGAGGTAATTCT...CATACTTCCTTTTGATTTTCGGTTTCCATAATGTCTGTTTCTCCTTGTGCATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456489.1
CDS-3UTR CCA 90 bp ACCTTCGCTTTAATTGGGCTCATTCTATACGTCTTTAAAACAGAGATACTGAACAATTGTTGCTGTAGATaGGTGATTTCGGCAATTCTC +
Preference number: 4 (lower is better)
Translates to: TFALIGLILYVFKTEILNNCCCR*VISAIL
Trigger: GAGAATTGCCGAAATCACCCATCTACAGCAACAATT...GTTCAGTATCTCTGTTTTAAAGACGTATAGAATGAGCCCAATTAAAGCGAAGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CCA 90 bp CCAACTCAACCAGATAAATCTGAGACCGAACAAAAACACAGAGTGCTTTCTCATGAGTATCTGTTTTTCTaGAATAAGTCTTCCAAGCAT +
Preference number: 4 (lower is better)
Translates to: PTQPDKSETEQKHRVLSHEYLFF*NKSSKH
Trigger: ATGCTTGGAAGACTTATTCCAGAAAAACAGATACTC...ATGAGAAAGCACTCTGTGTTTTTGTTCGGTCTCAGATTTATCTGGTTGAGTTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CCA 90 bp CATTGTAATTACCATTTATTGTACATCTACATGCACTGCCCCATGAGATTACAGGGGAACCTCATTTTCTaGGATTTTCTCTGCATAGTT +
Preference number: 4 (lower is better)
Translates to: HCNYHLLYIYMHCPMRLQGNLIF*DFLCIV
Trigger: AACTATGCAGAGAAAATCCCAGAAAATGAGGTTCCC...CTGTAATCTCATGGGGCAGTGCATGTAGATGTACAATAAATGGTAATTACAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000440794.2
CDS-3UTR CCA 90 bp TTTATTGAGAGCTTCCAACTAGTGTTTAAAAGACAAACAGGGCTTCAGCTACAGACTAAAAAGAGACTGTaGATATCGTTGATCGTAACG +
Preference number: 4 (lower is better)
Translates to: FIESFQLVFKRQTGLQLQTKKRL*ISLIVT
Trigger: CGTTACGATCAACGATATCCACAGTCTCTTTTTAGT...CTGTAGCTGAAGCCCTGTTTGTCTTTTAAACACTAGTTGGAAGCTCTCAATAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
3UTR CAA 72 bp GATATTTTTAATGATCAGTGGGTATCTTGTTACCCGTaGCATAGGCTTCAGTATAAAACTAGAGAGTGGCAT +
Preference number: 4 (lower is better)
Translates to: DIFNDQWVSCYP*HRLQYKTREWH
Trigger: ATGCCACTCTCTAGTTTTATACTGAAGCCTATGCAACGGGTAACAAGATACCCACTGATCATTAAAAATATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381285.8
CDS-3UTR TCA 90 bp ATCCCTGAATATCAGGTGCAAATCATGGCAGGGCAAATTTCTTTCTTTTTATTTTTTGAGAGTGATCCCTaGATATCAGGTGCAAATCAT +
Preference number: 4 (lower is better)
Translates to: IPEYQVQIMAGQISFFLFFESDP*ISGANH
Trigger: ATGATTTGCACCTGATATTCAGGGATCACTCTCAAA...AAATAAAAAGAAAGAAATTTGCCCTGCCATGATTTGCACCTGATATTCAGGGAT
37% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000437126.5
CDS-3UTR TCA 90 bp GAAACAGACATTATGGAAACCGAAAATCAAAAGGAAGTATGCAACAACCTGAAGAAGTATGCAACAACCTaGAGGATAATGGAAGAGAAA +
Preference number: 4 (lower is better)
Translates to: ETDIMETENQKEVCNNLKKYATT*RIMEEK
Trigger: TTTCTCTTCCATTATCCTTCAGGTTGTTGCATACTT...CTTCAGGTTGTTGCATACTTCCTTTTGATTTTCGGTTTCCATAATGTCTGTTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456489.1
CDS-3UTR GCA 90 bp GGTTCAAGATACACAGGAAGAGCAATTTGTACTGATGTTGCTACTGGTTTAAAGTGTGGTAAACTTGACTaGATAAGAATAGTTCTTGCT +
Preference number: 4 (lower is better)
Translates to: GSRYTGRAICTDVATGLKCGKLD*IRIVLA
Trigger: AGCAAGAACTATTCTTATGCAGTCAAGTTTACCACA...CTTTAAACCAGTAGCAACATCAGTACAAATTGCTCTTCCTGTGTATCTTGAACC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR GCA 90 bp TTTATTGAGAGCTTCCAACTAGTGTTTAAAAGACAAACAGGGCTTCAGCTACAGTGTGGTAAACTTGACTaGATAAGAATAGTTCTTGCT +
Preference number: 4 (lower is better)
Translates to: FIESFQLVFKRQTGLQLQCGKLD*IRIVLA
Trigger: AGCAAGAACTATTCTTATGCAGTCAAGTTTACCACA...CTGTAGCTGAAGCCCTGTTTGTCTTTTAAACACTAGTTGGAAGCTCTCAATAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CCA 90 bp TTTATTGAGAGCTTCCAACTAGTGTTTAAAAGACAAACAGGGCTTCAGCTACAGGAGTATCTGTTTTTCTaGAATAAGTCTTCCAAGCAT +
Preference number: 4 (lower is better)
Translates to: FIESFQLVFKRQTGLQLQEYLFF*NKSSKH
Trigger: ATGCTTGGAAGACTTATTCCAGAAAAACAGATACTC...CTGTAGCTGAAGCCCTGTTTGTCTTTTAAACACTAGTTGGAAGCTCTCAATAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CCA 90 bp ATCCCTGAATATCAGGTGCAAATCATGGCAGGGCAAATTTCTTTCTTTTTATTTATCAGGTGCAAATCATaGCAGGGCAAATTTCTTTCT +
Preference number: 4 (lower is better)
Translates to: IPEYQVQIMAGQISFFLFIRCKS*QGKFLS
Trigger: AGAAAGAAATTTGCCCTGCCATGATTTGCACCTGAT...AAATAAAAAGAAAGAAATTTGCCCTGCCATGATTTGCACCTGATATTCAGGGAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437126.5
CDS-3UTR GCA 90 bp ATACCAAATGGTGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGTATCTTGTTACCCGTTaGATAGGCTTCAGTATAAAA +
Preference number: 4 (lower is better)
Translates to: IPNGGFLEKEYNFQTACVYLVTR*IGFSIK
Trigger: TTTTATACTGAAGCCTATGCAACGGGTAACAAGATA...CACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCACCATTTGGTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR GCA 90 bp ATACCAAATGGTGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGTGGACTAAGTTTCCATaGCTATCAGGAATAGATTTT +
Preference number: 4 (lower is better)
Translates to: IPNGGFLEKEYNFQTACVWTKFP*LSGIDF
Trigger: AAAATCTATTCCTGATAGGCATGGAAACTTAGTCCA...CACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCACCATTTGGTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CCA 90 bp ATACCAAATGGTGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGATTTTTAATGATCAGTaGGTATCTTGTTACCCGTTG +
Preference number: 4 (lower is better)
Translates to: IPNGGFLEKEYNFQTACVIFNDQ*VSCYPL
Trigger: CAACGGGTAACAAGATACCCACTGATCATTAAAAAT...CACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCACCATTTGGTAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
3UTR CAA 72 bp TGCAATATGATTAGAGCATCGTACAAGGTAATAGCTTaGCCATGGAAAGAACTAATTTCTTATGTACAGGAT +
Preference number: 4 (lower is better)
Translates to: CNMIRASYKVIA*PWKELISYVQD
Trigger: ATCCTGTACATAAGAAATTAGTTCTTTCCATGGCAAAGCTATTACCTTGTACGATGCTCTAATCATATTGCA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CCA 90 bp ATCCCTGAATATCAGGTGCAAATCATGGCAGGGCAAATTTCTTTCTTTTTATTTTATGAGGCAATAACCTaGGCAATTTATTTTGAGAGT +
Preference number: 4 (lower is better)
Translates to: IPEYQVQIMAGQISFFLFYEAIT*AIYFES
Trigger: ACTCTCAAAATAAATTGCCCAGGTTATTGCCTCATA...AAATAAAAAGAAAGAAATTTGCCCTGCCATGATTTGCACCTGATATTCAGGGAT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000437126.5
CDS GCA 90 bp CTCATCTCCGGGCGGGTCCGCGCTGCCGCCCCAGGGACAAATCAGTaGCGCTCACGCGCCGCTGGGAGGGACGCAGGAGCCGCAGCCCCG +
Preference number: 5 (lower is better)
Translates to: LISGRVRAAAPGTNQ*RSRAAGRDAGAAAP
Trigger: CGGGGCTGCGGCTCCTGCGTCCCTCCCAGCGGCGCGTGAGCGGCACTGATTTGTCCCTGGGGCGGCAGCGCGGACCCGCCCGGAGATGAG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000381285.8
ENST00000381291.8
ENST00000381318.8
ENST00000399349.5
ENST00000399352.5
ENST00000399353.5
ENST00000399355.6
ENST00000399367.7
ENST00000444491.5
ENST00000451686.5
ENST00000470742.5
CDS-3UTR CAA 90 bp AGCCTCTCCGAAGCAGGTTCCTCCCAGACACCCGCAGACCAGATCGTGTGGCCCAAGGCTCACAGCTGCTaGACGCCCTGTGGCCCATCC +
Preference number: 5 (lower is better)
Translates to: SLSEAGSSQTPADQIVWPKAHSC*TPCGPS
Trigger: GGATGGGCCACAGGGCGTCAAGCAGCTGTGAGCCTT...GGGCCACACGATCTGGTCTGCGGGTGTCTGGGAGGAACCTGCTTCGGAGAGGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CAA 90 bp GTGCTGGTGGGCCACGTGGAGCTGAAGTCGGCCCAGTTATTAGGGGTCGTGGAGCCCGAAACGACCGGCTaGGCTGCTGGAGAGGCTACT +
Preference number: 5 (lower is better)
Translates to: VLVGHVELKSAQLLGVVEPETTG*AAGEAT
Trigger: AGTAGCCTCTCCAGCAGCCAAGCCGGTCGTTTCGGG...CTCCACGACCCCTAATAACTGGGCCGACTTCAGCTCCACGTGGCCCACCAGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379960.9
CDS-3UTR CAA 90 bp GCCCGTCCAGCTGCCGCCCAGCTTCTAGGAGGGTGGCCTGGACCAGGATGGGGACAGTTGGAATTCCACTaGGGGTTCAGAGTGTCCTGG +
Preference number: 5 (lower is better)
Translates to: ARPAAAQLLGGWPGPGWGQLEFH*GFRVSW
Trigger: CCAGGACACTCTGAACCCCAAGTGGAATTCCAACTG...TCCCCATCCTGGTCCAGGCCACCCTCCTAGAAGCTGGGCGGCAGCTGGACGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CAA 90 bp CAGCCAGAGGGCATCGTTCTAAGGAAGGAGAGTCAGGGCCTGTTTGGGGTTGGTCCACTCACAGCCCTCTaGCCACCCCAGCCAGAGGGC +
Preference number: 5 (lower is better)
Translates to: QPEGIVLRKESQGLFGVGPLTAL*PPQPEG
Trigger: GCCCTCTGGCTGGGGTGGCAAGAGGGCTGTGAGTGG...ACCAACCCCAAACAGGCCCTGACTCTCCTTCCTTAGAACGATGCCCTCTGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CAA 90 bp AGCCTCTCCGAAGCAGGTTCCTCCCAGACACCCGCAGACCAGATCGTGTGGCCCAGCACTGTGGCCCGCTaGTCACTGGAAGCACAAGGA +
Preference number: 5 (lower is better)
Translates to: SLSEAGSSQTPADQIVWPSTVAR*SLEAQG
Trigger: TCCTTGTGCTTCCAGTGACAAGCGGGCCACAGTGCT...GGGCCACACGATCTGGTCTGCGGGTGTCTGGGAGGAACCTGCTTCGGAGAGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS CCA 90 bp TCGCCCGTTCCCAGAGCTACCAGGCAGACACGGCATTCAAGGGCCTaGCTGATCCTTGAGCCCTCAGTGGGCTGCAGACTCCCTTGTCAT +
Preference number: 5 (lower is better)
Translates to: SPVPRATRQTRHSRA*LILEPSVGCRLPCH
Trigger: ATGACAAGGGAGTCTGCAGCCCACTGAGGGCTCAAGGATCAGCCAGGCCCTTGAATGCCGTGTCTGCCTGGTAGCTCTGGGAACGGGCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462212.5
ENST00000475422.5
ENST00000489261.1
CDS-3UTR CAA 90 bp AGCCTCTCCGAAGCAGGTTCCTCCCAGACACCCGCAGACCAGATCGTGTGGCCCAGTTCCAGTTGTCTTTaGCGCTCTTGCTCCTGGCGC +
Preference number: 5 (lower is better)
Translates to: SLSEAGSSQTPADQIVWPSSSCL*RSCSWR
Trigger: GCGCCAGGAGCAAGAGCGCAAAAGACAACTGGAACT...GGGCCACACGATCTGGTCTGCGGGTGTCTGGGAGGAACCTGCTTCGGAGAGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CAA 90 bp CTTAACTGGCCGGCACTTGGAACGGTGAGAGAGGGCTGGGCTGCCCATGCATCCGCCGGGTTCTCCAGTTaGGCTTTCATCCACCCATTC +
Preference number: 5 (lower is better)
Translates to: LNWPALGTVREGWAAHASAGFSS*AFIHPF
Trigger: GAATGGGTGGATGAAAGCCAAACTGGAGAACCCGGC...GGATGCATGGGCAGCCCAGCCCTCTCTCACCGTTCCAAGTGCCGGCCAGTTAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419241.1
CDS-3UTR CAA 90 bp GCCCGTCCAGCTGCCGCCCAGCTTCTAGGAGGGTGGCCTGGACCAGGATGGGGAGCAATCCAGGTGCCTTaGTTTTCATCTCACTTTCTG +
Preference number: 5 (lower is better)
Translates to: ARPAAAQLLGGWPGPGWGAIQVP*FSSHFL
Trigger: CAGAAAGTGAGATGAAAACAAAGGCACCTGGATTGC...TCCCCATCCTGGTCCAGGCCACCCTCCTAGAAGCTGGGCGGCAGCTGGACGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CAA 90 bp AAAGCTGATGCAGAAAGGGTGGGAAGCCTGAGGACCTCCGTGCAGCCCCAGCCTACCCCCTCTCCAGCCTaGGGGTACAGCTGTGAACTA +
Preference number: 5 (lower is better)
Translates to: KADAERVGSLRTSVQPQPTPSPA*GYSCEL
Trigger: TAGTTCACAGCTGTACCCCAAGGCTGGAGAGGGGGT...AGGCTGGGGCTGCACGGAGGTCCTCAGGCTTCCCACCCTTTCTGCATCAGCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CAA 90 bp AAAGCTGATGCAGAAAGGGTGGGAAGCCTGAGGACCTCCGTGCAGCCCCAGCCTAGAGTCAGGGCCTGTTaGGGGTTGGTAGACCAGAGC +
Preference number: 5 (lower is better)
Translates to: KADAERVGSLRTSVQPQPRVRAC*GLVDQS
Trigger: GCTCTGGTCTACCAACCCCAAACAGGCCCTGACTCT...AGGCTGGGGCTGCACGGAGGTCCTCAGGCTTCCCACCCTTTCTGCATCAGCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CAA 90 bp CGTGCTGGTGGGCCACGTGGAGCTGAAGTCGGCCCAGTTATTAGGGGTCGTGGAGCCGGGTTCTCCAGTTaGGCTTTCATCCACCATGAC +
Preference number: 5 (lower is better)
Translates to: RAGGPRGAEVGPVIRGRGAGFSS*AFIHHD
Trigger: GTCATGGTGGATGAAAGCCAAACTGGAGAACCCGGC...TCCACGACCCCTAATAACTGGGCCGACTTCAGCTCCACGTGGCCCACCAGCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379960.9
CDS TCA 90 bp CAGAGCTACCAGGCAGACACGGCATTCAAGGGCCTGGCTGATCCTTaGGCCCTCAGTGGGCTGCAGACTCCCTTGTCATCCCGTGAAACT +
Preference number: 5 (lower is better)
Translates to: QSYQADTAFKGLADP*ALSGLQTPLSSRET
Trigger: AGTTTCACGGGATGACAAGGGAGTCTGCAGCCCACTGAGGGCTCAAGGATCAGCCAGGCCCTTGAATGCCGTGTCTGCCTGGTAGCTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462212.5
ENST00000475422.5
ENST00000489261.1
CDS TCA 90 bp CCAACAAGCACAGGCCAGACAAGCACACACAGCCACAAAGGGCCCTaGGGCAGCACAGCAGGAGGGCTGGATGCTTCACTGTTTCCCAAC +
Preference number: 5 (lower is better)
Translates to: PTSTGQTSTHSHKGP*GSTAGGLDASLFPN
Trigger: GTTGGGAAACAGTGAAGCATCCAGCCCTCCTGCTGTGCTGCCTCAGGGCCCTTTGTGGCTGTGTGTGCTTGTCTGGCCTGTGCTTGTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487427.5
CDS-3UTR CAA 90 bp GGCTCTGAAGAGGTTACTGCCAAAGGGGCGGGGGTCTCACGCAAGGCCAGTTTGGACAGGTGGCAGTGGTaGGCCAGACATAGCTACATC +
Preference number: 5 (lower is better)
Translates to: GSEEVTAKGAGVSRKASLDRWQW*ARHSYI
Trigger: GATGTAGCTATGTCTGGCCAACCACTGCCACCTGTC...CAAACTGGCCTTGCGTGAGACCCCCGCCCCTTTGGCAGTAACCTCTTCAGAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379960.9
CDS-3UTR CAA 90 bp CTGCCCATGCATCCCAGTTATCCGTTTCTGGTTTCTCATTCGTGCTGGTGGGCCAGGCGCTCCTGCTCCTaGCGCTGCTGTTCCAGGAGA +
Preference number: 5 (lower is better)
Translates to: LPMHPSYPFLVSHSCWWARRSCS*RCCSRR
Trigger: TCTCCTGGAACAGCAGCGCAAGGAGCAGGAGCGCCT...GGCCCACCAGCACGAATGAGAAACCAGAAACGGATAACTGGGATGCATGGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379960.9
CDS-3UTR CAA 90 bp CTGCACCATGTGAAAGGAGAAGGACCTCTACACGACCACCAGCACAGCCTCCCGTTGTCTTTTGCGCTCTaGCTCCTGGCGCTCACGCTC +
Preference number: 5 (lower is better)
Translates to: LHHVKGEGPLHDHQHSLPLSFAL*LLALTL
Trigger: GAGCGTGAGCGCCAGGAGCAAGAGCGCAAAAGACAA...CGGGAGGCTGTGCTGGTGGTCGTGTAGAGGTCCTTCTCCTTTCACATGGTGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CAA 90 bp CACCATGTGAAAGGAGAAGGACCTCTACACGACCACCAGCACAGCCTCCCGACATCACGCAAGGCCAGTTaGGGGGCAGGGGCAGATGTT +
Preference number: 5 (lower is better)
Translates to: HHVKGEGPLHDHQHSLPTSRKAS*GAGADV
Trigger: AACATCTGCCCCTGCCCCCAAACTGGCCTTGCGTGA...TGTCGGGAGGCTGTGCTGGTGGTCGTGTAGAGGTCCTTCTCCTTTCACATGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CAA 90 bp GTGCTGGTGGGCCACGTGGAGCTGAAGTCGGCCCAGTTATTAGGGGTCGTGGAGCAGTCAGGGTCCTCCTaGTTGAGGACGTTGATGATC +
Preference number: 5 (lower is better)
Translates to: VLVGHVELKSAQLLGVVEQSGSS*LRTLMI
Trigger: GATCATCAACGTCCTCAACAAGGAGGACCCTGACTG...CTCCACGACCCCTAATAACTGGGCCGACTTCAGCTCCACGTGGCCCACCAGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379960.9
CDS-3UTR CAA 90 bp CACCATCAACCTTCCAATGCCTGTTGCCCTTTGGGAACGGACCAGGTACGCTTTATCAGGGCAGCCCCGTaGAGCTGGCGGCTGCAGAAG +
Preference number: 5 (lower is better)
Translates to: HHQPSNACCPLGTDQVRFIRAAP*SWRLQK
Trigger: CTTCTGCAGCCGCCAGCTCAACGGGGCTGCCCTGAT...AAAGCGTACCTGGTCCGTTCCCAAAGGGCAACAGGCATTGGAAGGTTGATGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381285.8
CDS-3UTR CAA 90 bp AAAGCTGATGCAGAAAGGGTGGGAAGCCTGAGGACCTCCGTGCAGCCCCAGCCTTCGGGGCAGGGAGGATaGTCGAGAATGATTCCTAGG +
Preference number: 5 (lower is better)
Translates to: KADAERVGSLRTSVQPQPSGQGG*SRMIPR
Trigger: CCTAGGAATCATTCTCGACAATCCTCCCTGCCCCGA...AGGCTGGGGCTGCACGGAGGTCCTCAGGCTTCCCACCCTTTCTGCATCAGCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CAA 90 bp CAGGATTCAGCACATTCAAGCACAGAACAGGTCACCAGCAACGACTGCTGCTATCCTGGCGCGCTAGGCTaGAACCCTAGGCTCGCCGCG +
Preference number: 5 (lower is better)
Translates to: QDSAHSSTEQVTSNDCCYPGALG*NPRLAA
Trigger: CGCGGCGAGCCTAGGGTTCAAGCCTAGCGCGCCAGG...ATAGCAGCAGTCGTTGCTGGTGACCTGTTCTGTGCTTGAATGTGCTGAATCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CAA 90 bp CTGCACCATGTGAAAGGAGAAGGACCTCTACACGACCACCAGCACAGCCTCCCGCTGGAATGGATCCCATaGGCACTGGAGCAACAGCTG +
Preference number: 5 (lower is better)
Translates to: LHHVKGEGPLHDHQHSLPLEWIP*ALEQQL
Trigger: CAGCTGTTGCTCCAGTGCCAATGGGATCCATTCCAG...CGGGAGGCTGTGCTGGTGGTCGTGTAGAGGTCCTTCTCCTTTCACATGGTGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CAA 90 bp CTGCACCATGTGAAAGGAGAAGGACCTCTACACGACCACCAGCACAGCCTCCCGAAATGCAGGCAGAGGTaGTATAACAGGGGGAGCCCC +
Preference number: 5 (lower is better)
Translates to: LHHVKGEGPLHDHQHSLPKCRQR*YNRGSP
Trigger: GGGGCTCCCCCTGTTATACAACCTCTGCCTGCATTT...CGGGAGGCTGTGCTGGTGGTCGTGTAGAGGTCCTTCTCCTTTCACATGGTGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CAA 90 bp CTGCACCATGTGAAAGGAGAAGGACCTCTACACGACCACCAGCACAGCCTCCCGGACAGGTGGCAGTGGTaGGCCAGACATAGCTACATC +
Preference number: 5 (lower is better)
Translates to: LHHVKGEGPLHDHQHSLPDRWQW*ARHSYI
Trigger: GATGTAGCTATGTCTGGCCAACCACTGCCACCTGTC...CGGGAGGCTGTGCTGGTGGTCGTGTAGAGGTCCTTCTCCTTTCACATGGTGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CAA 90 bp AAGGGGCTAGACTCCCAGCTGCACCCTGTTGAGGGCTATGGGATTTCAGCGACCAGTTCCAGTTGTCTTTaGCGCTCTTGCTCCTGGCGC +
Preference number: 5 (lower is better)
Translates to: KGLDSQLHPVEGYGISATSSSCL*RSCSWR
Trigger: GCGCCAGGAGCAAGAGCGCAAAAGACAACTGGAACT...GGTCGCTGAAATCCCATAGCCCTCAACAGGGTGCAGCTGGGAGTCTAGCCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CAA 90 bp GGCACTTGGAACGGTGAGAGAGGGCTGGGCTGCCCATGCATCCCAGTTATCCGTGGGCAGGGGCAGATGTaGAATCAGTCACTGGTTTCA +
Preference number: 5 (lower is better)
Translates to: GTWNGERGLGCPCIPVIRGQGQM*NQSLVS
Trigger: TGAAACCAGTGACTGATTCAACATCTGCCCCTGCCC...ACGGATAACTGGGATGCATGGGCAGCCCAGCCCTCTCTCACCGTTCCAAGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379960.9
ENST00000419241.1
CDS-3UTR CAA 90 bp TACAATTTCCAGACAGCATGTGTGGCCGTGGGCTGGGACCCTGCTGAGCACACCTCCCCGGACATCTTCTaGCGGACTCTCAGCGCTTTT +
Preference number: 5 (lower is better)
Translates to: YNFQTACVAVGWDPAEHTSPDIF*RTLSAF
Trigger: AAAAGCGCTGAGAGTCCGCAAGAAGATGTCCGGGGA...GGTGTGCTCAGCAGGGTCCCAGCCCACGGCCACACATGCTGTCTGGAAATTGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CAA 90 bp TACAATTTCCAGACAGCATGTGTGGCCGTGGGCTGGGACCCTGCTGAGCACACCCCACTGTGCAGAAATTaGCGCGGCCCCAAGCAATTG +
Preference number: 5 (lower is better)
Translates to: YNFQTACVAVGWDPAEHTPLCRN*RGPKQL
Trigger: CAATTGCTTGGGGCCGCGCAAATTTCTGCACAGTGG...GGTGTGCTCAGCAGGGTCCCAGCCCACGGCCACACATGCTGTCTGGAAATTGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CAA 90 bp TTCTCCAGGGCGTGCTTCAAGTGGCTGTGGTCCGGGTGGTTTTCAGGGGTGTTTTTGGGGCTGAAGACTTaGTCGGTGCCAGAAGACCCC +
Preference number: 5 (lower is better)
Translates to: FSRACFKWLWSGWFSGVFLGLKT*SVPEDP
Trigger: GGGGTCTTCTGGCACCGACAAAGTCTTCAGCCCCAA...AAACACCCCTGAAAACCACCCGGACCACAGCCACTTGAAGCACGCCCTGGAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000381285.8
CDS-3UTR CAA 90 bp TTCCAGTTGTCTTTTGCGCTCTTGCTCCTGGCGCTCACGCTCCTTCCTCTCCTGCTGGAATGGATCCCATaGGCACTGGAGCAACAGCTG +
Preference number: 5 (lower is better)
Translates to: FQLSFALLLLALTLLPLLLEWIP*ALEQQL
Trigger: CAGCTGTTGCTCCAGTGCCAATGGGATCCATTCCAG...CAGGAGAGGAAGGAGCGTGAGCGCCAGGAGCAAGAGCGCAAAAGACAACTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379960.9
CDS-3UTR CAA 90 bp CACCATGTGAAAGGAGAAGGACCTCTACACGACCACCAGCACAGCCTCCCGACACTGGAATGGATCCCATaGGCACTGGAGCAACAGCTG +
Preference number: 5 (lower is better)
Translates to: HHVKGEGPLHDHQHSLPTLEWIP*ALEQQL
Trigger: CAGCTGTTGCTCCAGTGCCAATGGGATCCATTCCAG...TGTCGGGAGGCTGTGCTGGTGGTCGTGTAGAGGTCCTTCTCCTTTCACATGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CAA 90 bp AAGGGGCTAGACTCCCAGCTGCACCCTGTTGAGGGCTATGGGATTTCAGCGACCCTGTTCCAGGAGAGCTaGCCTTCGTTTCTCCAGTTC +
Preference number: 5 (lower is better)
Translates to: KGLDSQLHPVEGYGISATLFQES*PSFLQF
Trigger: GAACTGGAGAAACGAAGGCAAGCTCTCCTGGAACAG...GGTCGCTGAAATCCCATAGCCCTCAACAGGGTGCAGCTGGGAGTCTAGCCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CAA 90 bp GAAACTTCCATAGACCAGCTCTTCAAAGAGCTAAGCCAGGGCCTGATCAGACCGAGGCGCTCCTGCTCCTaGCGCTGCTGTTCCAGGAGA +
Preference number: 5 (lower is better)
Translates to: ETSIDQLFKELSQGLIRPRRSCS*RCCSRR
Trigger: TCTCCTGGAACAGCAGCGCAAGGAGCAGGAGCGCCT...CGGTCTGATCAGGCCCTGGCTTAGCTCTTTGAAGAGCTGGTCTATGGAAGTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000381318.8
CDS-3UTR CAA 90 bp ATTGTTTCGGGGCAGGGAGGATTGTCGAGAATGATTCCTAGGAGCTTTGAGGGGAGGCGCTCCTGCTCCTaGCGCTGCTGTTCCAGGAGA +
Preference number: 5 (lower is better)
Translates to: IVSGQGGLSRMIPRSFEGRRSCS*RCCSRR
Trigger: TCTCCTGGAACAGCAGCGCAAGGAGCAGGAGCGCCT...CCCCTCAAAGCTCCTAGGAATCATTCTCGACAATCCTCCCTGCCCCGAAACAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CAA 90 bp CTGCACCATGTGAAAGGAGAAGGACCTCTACACGACCACCAGCACAGCCTCCCGGGGCAGGGGCAGATGTaGAATCAGTCACTGGTTTCA +
Preference number: 5 (lower is better)
Translates to: LHHVKGEGPLHDHQHSLPGQGQM*NQSLVS
Trigger: TGAAACCAGTGACTGATTCAACATCTGCCCCTGCCC...CGGGAGGCTGTGCTGGTGGTCGTGTAGAGGTCCTTCTCCTTTCACATGGTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CAA 90 bp ACTGAAGTGCAACTGAACGAGGAGGAGAGGTCCTCGCTCTCTGCACCATGTGAATCACGCAAGGCCAGTTaGGGGGCAGGGGCAGATGTT +
Preference number: 5 (lower is better)
Translates to: TEVQLNEEERSSLSAPCESRKAS*GAGADV
Trigger: AACATCTGCCCCTGCCCCCAAACTGGCCTTGCGTGA...TTCACATGGTGCAGAGAGCGAGGACCTCTCCTCCTCGTTCAGTTGCACTTCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CAA 90 bp AAGGCCAGTTTGGGGGCAGGGGCAGATGTTGAATCAGTCACTGGTTTCACTGGATCACGCAAGGCCAGTTaGGGGGCAGGGGCAGATGTT +
Preference number: 5 (lower is better)
Translates to: KASLGAGADVESVTGFTGSRKAS*GAGADV
Trigger: AACATCTGCCCCTGCCCCCAAACTGGCCTTGCGTGA...TCCAGTGAAACCAGTGACTGATTCAACATCTGCCCCTGCCCCCAAACTGGCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000379960.9
ENST00000419241.1
CDS-3UTR CAA 90 bp AGCACAGAACAGGTCACCAGCAACGACTGCTGCTATGAAATATCACAGGCCTCCCCCGAAACGACCGGCTaGGCTGCTGGAGAGGCTACT +
Preference number: 5 (lower is better)
Translates to: STEQVTSNDCCYEISQASPETTG*AAGEAT
Trigger: AGTAGCCTCTCCAGCAGCCAAGCCGGTCGTTTCGGG...GGAGGCCTGTGATATTTCATAGCAGCAGTCGTTGCTGGTGACCTGTTCTGTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000381318.8
CDS-3UTR CAA 90 bp CACCATGTGAAAGGAGAAGGACCTCTACACGACCACCAGCACAGCCTCCCGACACTTTTTCCCACGTGCTaGCAGCTCTCCTTCCCACCA +
Preference number: 5 (lower is better)
Translates to: HHVKGEGPLHDHQHSLPTLFPTC*QLSFPP
Trigger: TGGTGGGAAGGAGAGCTGCAAGCACGTGGGAAAAAG...TGTCGGGAGGCTGTGCTGGTGGTCGTGTAGAGGTCCTTCTCCTTTCACATGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CAA 90 bp GGACCTTTGGAGCCCTGGTCTTTCTTGATGTCCGCCACACGGATCTCCGTCCGACAGTCAGGGTCCTCCTaGTTGAGGACGTTGATGATC +
Preference number: 5 (lower is better)
Translates to: GPLEPWSFLMSATRISVRQSGSS*LRTLMI
Trigger: GATCATCAACGTCCTCAACAAGGAGGACCCTGACTG...TCGGACGGAGATCCGTGTGGCGGACATCAAGAAAGACCAGGGCTCCAAAGGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381285.8
CDS-3UTR CAA 90 bp CTGCACCATGTGAAAGGAGAAGGACCTCTACACGACCACCAGCACAGCCTCCCGCAGTCAGGGTCCTCCTaGTTGAGGACGTTGATGATC +
Preference number: 5 (lower is better)
Translates to: LHHVKGEGPLHDHQHSLPQSGSS*LRTLMI
Trigger: GATCATCAACGTCCTCAACAAGGAGGACCCTGACTG...CGGGAGGCTGTGCTGGTGGTCGTGTAGAGGTCCTTCTCCTTTCACATGGTGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CAA 90 bp GGGCACTTCTGGTGGCCAAGTACAGAAAGTCTGTGCCCCAGAAGCAGCCTGGACGGCTCCAGTTGCTGGTaGACAGCATTAAGATGCACG +
Preference number: 5 (lower is better)
Translates to: GHFWWPSTESLCPRSSLDGSSCW*TALRCT
Trigger: CGTGCATCTTAATGCTGTCAACCAGCAACTGGAGCC...GTCCAGGCTGCTTCTGGGGCACAGACTTTCTGTACTTGGCCACCAGAAGTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CAA 90 bp CACCATGTGAAAGGAGAAGGACCTCTACACGACCACCAGCACAGCCTCCCGACAGCCGGGTTCTCCAGTTaGGCTTTCATCCACCATGAC +
Preference number: 5 (lower is better)
Translates to: HHVKGEGPLHDHQHSLPTAGFSS*AFIHHD
Trigger: GTCATGGTGGATGAAAGCCAAACTGGAGAACCCGGC...TGTCGGGAGGCTGTGCTGGTGGTCGTGTAGAGGTCCTTCTCCTTTCACATGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CAA 90 bp CTGCACCATGTGAAAGGAGAAGGACCTCTACACGACCACCAGCACAGCCTCCCGTGCCACCAAAAGGTGTaGGAAACTGAGCCATGGTTC +
Preference number: 5 (lower is better)
Translates to: LHHVKGEGPLHDHQHSLPCHQKV*ETEPWF
Trigger: GAACCATGGCTCAGTTTCCAACACCTTTTGGTGGCA...CGGGAGGCTGTGCTGGTGGTCGTGTAGAGGTCCTTCTCCTTTCACATGGTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CAA 90 bp CTGCACCATGTGAAAGGAGAAGGACCTCTACACGACCACCAGCACAGCCTCCCGGCCTGTATTTCAGTCTaGATGACTGAGGAACAGCCC +
Preference number: 5 (lower is better)
Translates to: LHHVKGEGPLHDHQHSLPACISV*MTEEQP
Trigger: GGGCTGTTCCTCAGTCATCAAGACTGAAATACAGGC...CGGGAGGCTGTGCTGGTGGTCGTGTAGAGGTCCTTCTCCTTTCACATGGTGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CAA 90 bp CTGCACCATGTGAAAGGAGAAGGACCTCTACACGACCACCAGCACAGCCTCCCGTTCTCCAGTTCCAGGTaGCCACGTTCAAAGTTCTCC +
Preference number: 5 (lower is better)
Translates to: LHHVKGEGPLHDHQHSLPFSSSR*PRSKFS
Trigger: GGAGAACTTTGAACGTGGCAACCTGGAACTGGAGAA...CGGGAGGCTGTGCTGGTGGTCGTGTAGAGGTCCTTCTCCTTTCACATGGTGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CAA 90 bp TTCCAGTTGTCTTTTGCGCTCTTGCTCCTGGCGCTCACGCTCCTTCCTCTCCTGCTGTTCCAGGAGAGCTaGCCTTCGTTTCTCCAGTTC +
Preference number: 5 (lower is better)
Translates to: FQLSFALLLLALTLLPLLLFQES*PSFLQF
Trigger: GAACTGGAGAAACGAAGGCAAGCTCTCCTGGAACAG...CAGGAGAGGAAGGAGCGTGAGCGCCAGGAGCAAGAGCGCAAAAGACAACTGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379960.9
CDS-3UTR CAA 90 bp CAAACAACTGCAGGTCCAAGCGGACCACAATCTCTCCCGTGGGGACTTCGTGCACTGTTCCAGGAGAGCTaGCCTTCGTTTCTCCAGTTC +
Preference number: 5 (lower is better)
Translates to: QTTAGPSGPQSLPWGLRALFQES*PSFLQF
Trigger: GAACTGGAGAAACGAAGGCAAGCTCTCCTGGAACAG...TGCACGAAGTCCCCACGGGAGAGATTGTGGTCCGCTTGGACCTGCAGTTGTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381285.8
CDS-3UTR CAA 90 bp ACTGAAGTGCAACTGAACGAGGAGGAGAGGTCCTCGCTCTCTGCACCATGTGAATTGTCTTTTGCGCTCTaGCTCCTGGCGCTCACGCTC +
Preference number: 5 (lower is better)
Translates to: TEVQLNEEERSSLSAPCELSFAL*LLALTL
Trigger: GAGCGTGAGCGCCAGGAGCAAGAGCGCAAAAGACAA...TTCACATGGTGCAGAGAGCGAGGACCTCTCCTCCTCGTTCAGTTGCACTTCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CAA 90 bp TACAATTTCCAGACAGCATGTGTGGCCGTGGGCTGGGACCCTGCTGAGCACACCCTTCTCCAGTTCCAGTaGTCTTTTGCGCTCTTGCTC +
Preference number: 5 (lower is better)
Translates to: YNFQTACVAVGWDPAEHTLLQFQ*SFALLL
Trigger: GAGCAAGAGCGCAAAAGACAACTGGAACTGGAGAAG...GGTGTGCTCAGCAGGGTCCCAGCCCACGGCCACACATGCTGTCTGGAAATTGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CAA 90 bp CTGCACCATGTGAAAGGAGAAGGACCTCTACACGACCACCAGCACAGCCTCCCGCTTCGTGGAGTTTTCTaGGTCTCTGATGCTCGTCCT +
Preference number: 5 (lower is better)
Translates to: LHHVKGEGPLHDHQHSLPLRGVF*VSDARP
Trigger: AGGACGAGCATCAGAGACCAAGAAAACTCCACGAAG...CGGGAGGCTGTGCTGGTGGTCGTGTAGAGGTCCTTCTCCTTTCACATGGTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CAA 90 bp TACAATTTCCAGACAGCATGTGTGGCCGTGGGCTGGGACCCTGCTGAGCACACCAAAAGCCGACCCAGCTaGTCTTGTGCTTCCTGTTTG +
Preference number: 5 (lower is better)
Translates to: YNFQTACVAVGWDPAEHTKSRPS*SCASCL
Trigger: CAAACAGGAAGCACAAGACAAGCTGGGTCGGCTTTT...GGTGTGCTCAGCAGGGTCCCAGCCCACGGCCACACATGCTGTCTGGAAATTGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CAA 90 bp CACCATGTGAAAGGAGAAGGACCTCTACACGACCACCAGCACAGCCTCCCGACAGGGCAGGGGCAGATGTaGAATCAGTCACTGGTTTCA +
Preference number: 5 (lower is better)
Translates to: HHVKGEGPLHDHQHSLPTGQGQM*NQSLVS
Trigger: TGAAACCAGTGACTGATTCAACATCTGCCCCTGCCC...TGTCGGGAGGCTGTGCTGGTGGTCGTGTAGAGGTCCTTCTCCTTTCACATGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CAA 90 bp ACAGAATCCTCCTTAGGTGGCCTAAGGGGCACTTCTGGTGGCCAAGTACAGAAATCACGCAAGGCCAGTTaGGGGGCAGGGGCAGATGTT +
Preference number: 5 (lower is better)
Translates to: TESSLGGLRGTSGGQVQKSRKAS*GAGADV
Trigger: AACATCTGCCCCTGCCCCCAAACTGGCCTTGCGTGA...TTTCTGTACTTGGCCACCAGAAGTGCCCCTTAGGCCACCTAAGGAGGATTCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CAA 90 bp TACAATTTCCAGACAGCATGTGTGGCCGTGGGCTGGGACCCTGCTGAGCACACCAAACCACCACATGTCTaGCTGTTCCAGGACGGTGAT +
Preference number: 5 (lower is better)
Translates to: YNFQTACVAVGWDPAEHTKPPHV*LFQDGD
Trigger: ATCACCGTCCTGGAACAGCAAGACATGTGGTGGTTT...GGTGTGCTCAGCAGGGTCCCAGCCCACGGCCACACATGCTGTCTGGAAATTGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CAA 90 bp AAAAGGAATACAATTTCCAGACAGCATGTGTGGCCGTGGGCTGGGACCCTGCTGAATGCCTGTTGCCCTTaGGGAACGGACCAGGTACGC +
Preference number: 5 (lower is better)
Translates to: KRNTISRQHVWPWAGTLLNACCP*GTDQVR
Trigger: GCGTACCTGGTCCGTTCCCAAAGGGCAACAGGCATT...CAGCAGGGTCCCAGCCCACGGCCACACATGCTGTCTGGAAATTGTATTCCTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CAA 90 bp AGCACAGAACAGGTCACCAGCAACGACTGCTGCTATGAAATATCACAGGCCTCCCAGGGAATGCATCCCTaGGCCCCCAGGATAGCTCTC +
Preference number: 5 (lower is better)
Translates to: STEQVTSNDCCYEISQASQGMHP*APRIAL
Trigger: GAGAGCTATCCTGGGGGCCAAGGGATGCATTCCCTG...GGAGGCCTGTGATATTTCATAGCAGCAGTCGTTGCTGGTGACCTGTTCTGTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS CCA 90 bp AACTGGAATGGATCCCATTGGCACTGGAGCAACAGCTGTAAGCGGTaGCATGCTGGCGATACCTCCCATACCAAATGCTGGTGCGCTAGA +
Preference number: 5 (lower is better)
Translates to: NWNGSHWHWSNSCKR*HAGDTSHTKCWCAR
Trigger: TCTAGCGCACCAGCATTTGGTATGGGAGGTATCGCCAGCATGCCACCGCTTACAGCTGTTGCTCCAGTGCCAATGGGATCCATTCCAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000381291.8
ENST00000381318.8
ENST00000399338.8
ENST00000399349.5
ENST00000399352.5
ENST00000399355.6
ENST00000399367.7
CDS-3UTR CAA 90 bp AAAAGGAATACAATTTCCAGACAGCATGTGTGGCCGTGGGCTGGGACCCTGCTGCTGGAATGGATCCCATaGGCACTGGAGCAACAGCTG +
Preference number: 5 (lower is better)
Translates to: KRNTISRQHVWPWAGTLLLEWIP*ALEQQL
Trigger: CAGCTGTTGCTCCAGTGCCAATGGGATCCATTCCAG...CAGCAGGGTCCCAGCCCACGGCCACACATGCTGTCTGGAAATTGTATTCCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CAA 90 bp ATCCCAGTTATCCGTTTCTGGTTTCTCATTCGTGCTGGTGGGCCACGTGGAGCTAAATGCAGGCAGAGGTaGTATAACAGGGGGAGCCCC +
Preference number: 5 (lower is better)
Translates to: IPVIRFWFLIRAGGPRGAKCRQR*YNRGSP
Trigger: GGGGCTCCCCCTGTTATACAACCTCTGCCTGCATTT...AGCTCCACGTGGCCCACCAGCACGAATGAGAAACCAGAAACGGATAACTGGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379960.9
CDS-3UTR CAA 90 bp ACTGAAGTGCAACTGAACGAGGAGGAGAGGTCCTCGCTCTCTGCACCATGTGAAGACAGGTGGCAGTGGTaGGCCAGACATAGCTACATC +
Preference number: 5 (lower is better)
Translates to: TEVQLNEEERSSLSAPCEDRWQW*ARHSYI
Trigger: GATGTAGCTATGTCTGGCCAACCACTGCCACCTGTC...TTCACATGGTGCAGAGAGCGAGGACCTCTCCTCCTCGTTCAGTTGCACTTCAGT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CAA 90 bp AAAAGGAATACAATTTCCAGACAGCATGTGTGGCCGTGGGCTGGGACCCTGCTGGACAGGTGGCAGTGGTaGGCCAGACATAGCTACATC +
Preference number: 5 (lower is better)
Translates to: KRNTISRQHVWPWAGTLLDRWQW*ARHSYI
Trigger: GATGTAGCTATGTCTGGCCAACCACTGCCACCTGTC...CAGCAGGGTCCCAGCCCACGGCCACACATGCTGTCTGGAAATTGTATTCCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CAA 90 bp GATGCCTTCAACCACGTTCACCATCAACCTTCCAATGCCTGTTGCCCTTTGGGATTGTCTTTTGCGCTCTaGCTCCTGGCGCTCACGCTC +
Preference number: 5 (lower is better)
Translates to: DAFNHVHHQPSNACCPLGLSFAL*LLALTL
Trigger: GAGCGTGAGCGCCAGGAGCAAGAGCGCAAAAGACAA...TCCCAAAGGGCAACAGGCATTGGAAGGTTGATGGTGAACGTGGTTGAAGGCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381285.8
CDS-3UTR CAA 90 bp CAGTTATCCGTTTCTGGTTTCTCATTCGTGCTGGTGGGCCACGTGGAGCTGAAGAGTTCCAGTTGTCTTTaGCGCTCTTGCTCCTGGCGC +
Preference number: 5 (lower is better)
Translates to: QLSVSGFSFVLVGHVELKSSSCL*RSCSWR
Trigger: GCGCCAGGAGCAAGAGCGCAAAAGACAACTGGAACT...CTTCAGCTCCACGTGGCCCACCAGCACGAATGAGAAACCAGAAACGGATAACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379960.9
CDS-3UTR CAA 90 bp ACTGAAGTGCAACTGAACGAGGAGGAGAGGTCCTCGCTCTCTGCACCATGTGAAAGTTCCAGTTGTCTTTaGCGCTCTTGCTCCTGGCGC +
Preference number: 5 (lower is better)
Translates to: TEVQLNEEERSSLSAPCESSSCL*RSCSWR
Trigger: GCGCCAGGAGCAAGAGCGCAAAAGACAACTGGAACT...TTCACATGGTGCAGAGAGCGAGGACCTCTCCTCCTCGTTCAGTTGCACTTCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CAA 90 bp CACCATGTGAAAGGAGAAGGACCTCTACACGACCACCAGCACAGCCTCCCGACACCGTTCCCACTCAAGTaGTCGTTGCCTTTCAAGTTC +
Preference number: 5 (lower is better)
Translates to: HHVKGEGPLHDHQHSLPTPFPLK*SLPFKF
Trigger: GAACTTGAAAGGCAACGACAACTTGAGTGGGAACGG...TGTCGGGAGGCTGTGCTGGTGGTCGTGTAGAGGTCCTTCTCCTTTCACATGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CAA 90 bp CTGCACCATGTGAAAGGAGAAGGACCTCTACACGACCACCAGCACAGCCTCCCGTGTGCTCTCAATTTCTaGCCTTTGGGTGGTCAATCG +
Preference number: 5 (lower is better)
Translates to: LHHVKGEGPLHDHQHSLPCALNF*PLGGQS
Trigger: CGATTGACCACCCAAAGGCAAGAAATTGAGAGCACA...CGGGAGGCTGTGCTGGTGGTCGTGTAGAGGTCCTTCTCCTTTCACATGGTGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CAA 90 bp AAGGGGCTAGACTCCCAGCTGCACCCTGTTGAGGGCTATGGGATTTCAGCGACCTGTGCTCTCAATTTCTaGCCTTTGGGTGGTCAATCG +
Preference number: 5 (lower is better)
Translates to: KGLDSQLHPVEGYGISATCALNF*PLGGQS
Trigger: CGATTGACCACCCAAAGGCAAGAAATTGAGAGCACA...GGTCGCTGAAATCCCATAGCCCTCAACAGGGTGCAGCTGGGAGTCTAGCCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CAA 90 bp CACCATGTGAAAGGAGAAGGACCTCTACACGACCACCAGCACAGCCTCCCGACAAAAAGCCGACCCAGCTaGTCTTGTGCTTCCTGTTTG +
Preference number: 5 (lower is better)
Translates to: HHVKGEGPLHDHQHSLPTKSRPS*SCASCL
Trigger: CAAACAGGAAGCACAAGACAAGCTGGGTCGGCTTTT...TGTCGGGAGGCTGTGCTGGTGGTCGTGTAGAGGTCCTTCTCCTTTCACATGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CAA 90 bp CTGCACCATGTGAAAGGAGAAGGACCTCTACACGACCACCAGCACAGCCTCCCGTTTTCTCTGCATAGTTaGCAGGGAACCACCCTGTCT +
Preference number: 5 (lower is better)
Translates to: LHHVKGEGPLHDHQHSLPFSLHS*QGTTLS
Trigger: AGACAGGGTGGTTCCCTGCAAACTATGCAGAGAAAA...CGGGAGGCTGTGCTGGTGGTCGTGTAGAGGTCCTTCTCCTTTCACATGGTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CAA 90 bp AACTCGATGCCTTCAACCACGTTCACCATCAACCTTCCAATGCCTGTTGCCCTTTCACGCAAGGCCAGTTaGGGGGCAGGGGCAGATGTT +
Preference number: 5 (lower is better)
Translates to: NSMPSTTFTINLPMPVALSRKAS*GAGADV
Trigger: AACATCTGCCCCTGCCCCCAAACTGGCCTTGCGTGA...AAGGGCAACAGGCATTGGAAGGTTGATGGTGAACGTGGTTGAAGGCATCGAGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381285.8
CDS-3UTR CAA 90 bp TTCCAGTTGTCTTTTGCGCTCTTGCTCCTGGCGCTCACGCTCCTTCCTCTCCTGAAACCACCACATGTCTaGCTGTTCCAGGACGGTGAT +
Preference number: 5 (lower is better)
Translates to: FQLSFALLLLALTLLPLLKPPHV*LFQDGD
Trigger: ATCACCGTCCTGGAACAGCAAGACATGTGGTGGTTT...CAGGAGAGGAAGGAGCGTGAGCGCCAGGAGCAAGAGCGCAAAAGACAACTGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379960.9
CDS-3UTR CAA 90 bp GGGATTTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAGGAACCCGAAACGACCGGCTaGGCTGCTGGAGAGGCTACT +
Preference number: 5 (lower is better)
Translates to: GISATLEAIMRPVVRTKEPETTG*AAGEAT
Trigger: AGTAGCCTCTCCAGCAGCCAAGCCGGTCGTTTCGGG...TTCCTTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAAATCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CAA 90 bp TGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGGCCGTGGGCTGATCAGGGCAGCCCCGTaGAGCTGGCGGCTGCAGAAG +
Preference number: 5 (lower is better)
Translates to: WFLRKGIQFPDSMCGRGLIRAAP*SWRLQK
Trigger: CTTCTGCAGCCGCCAGCTCAACGGGGCTGCCCTGAT...CAGCCCACGGCCACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CAA 90 bp GTGACCGACAGGGTTTCAACTCGATGCCTTCAACCACGTTCACCATCAACCTTCAATGCCTGTTGCCCTTaGGGAACGGACCAGGTACGC +
Preference number: 5 (lower is better)
Translates to: VTDRVSTRCLQPRSPSTFNACCP*GTDQVR
Trigger: GCGTACCTGGTCCGTTCCCAAAGGGCAACAGGCATT...GAAGGTTGATGGTGAACGTGGTTGAAGGCATCGAGTTGAAACCCTGTCGGTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000420666.1
CDS-3UTR CAA 90 bp ACGGGTTGCTCTTTCCATGTGACCGACAGGGTTTCAACTCGATGCCTTCAACCAAATGCCTGTTGCCCTTaGGGAACGGACCAGGTACGC +
Preference number: 5 (lower is better)
Translates to: TGCSFHVTDRVSTRCLQPNACCP*GTDQVR
Trigger: GCGTACCTGGTCCGTTCCCAAAGGGCAACAGGCATT...TGGTTGAAGGCATCGAGTTGAAACCCTGTCGGTCACATGGAAAGAGCAACCCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000420666.1
CDS-3UTR CAA 90 bp ACGGGTTGCTCTTTCCATGTGACCGACAGGGTTTCAACTCGATGCCTTCAACCAGAGCCCTGGTCTTTCTaGATGTCCGCCACACGGATC +
Preference number: 5 (lower is better)
Translates to: TGCSFHVTDRVSTRCLQPEPWSF*MSATRI
Trigger: GATCCGTGTGGCGGACATCAAGAAAGACCAGGGCTC...TGGTTGAAGGCATCGAGTTGAAACCCTGTCGGTCACATGGAAAGAGCAACCCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381285.8
CDS-3UTR CAA 90 bp TATGGGATTTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAGGTGTATCCGCGCAGCTaGCCACAGCCTGCCGGGAGA +
Preference number: 5 (lower is better)
Translates to: YGISATLEAIMRPVVRTKVYPRS*PQPAGR
Trigger: TCTCCCGGCAGGCTGTGGCAAGCTGCGCGGATACAC...CTTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAAATCCCATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CAA 90 bp AGCCTCTCCGAAGCAGGTTCCTCCCAGACACCCGCAGACCAGATCGTGTGGCCCATCCACAGGACATTTTaGTTGCAGTTTCTCATCTGT +
Preference number: 5 (lower is better)
Translates to: SLSEAGSSQTPADQIVWPIHRTF*LQFLIC
Trigger: ACAGATGAGAAACTGCAACAAAAATGTCCTGTGGAT...GGGCCACACGATCTGGTCTGCGGGTGTCTGGGAGGAACCTGCTTCGGAGAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CAA 90 bp AAAAGGAATACAATTTCCAGACAGCATGTGTGGCCGTGGGCTGGGACCCTGCTGAGGGCCTGTTTGGGGTaGGTAGACCAGAGCTCATCT +
Preference number: 5 (lower is better)
Translates to: KRNTISRQHVWPWAGTLLRACLG*VDQSSS
Trigger: AGATGAGCTCTGGTCTACCAACCCCAAACAGGCCCT...CAGCAGGGTCCCAGCCCACGGCCACACATGCTGTCTGGAAATTGTATTCCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CAA 90 bp ACTGAAGTGCAACTGAACGAGGAGGAGAGGTCCTCGCTCTCTGCACCATGTGAAGCCGGGTTCTCCAGTTaGGCTTTCATCCACCATGAC +
Preference number: 5 (lower is better)
Translates to: TEVQLNEEERSSLSAPCEAGFSS*AFIHHD
Trigger: GTCATGGTGGATGAAAGCCAAACTGGAGAACCCGGC...TTCACATGGTGCAGAGAGCGAGGACCTCTCCTCCTCGTTCAGTTGCACTTCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CAA 90 bp CACCATGTGAAAGGAGAAGGACCTCTACACGACCACCAGCACAGCCTCCCGACAAGAAATAGCAACTGGTaGCTGTTTCATGACAGGGGG +
Preference number: 5 (lower is better)
Translates to: HHVKGEGPLHDHQHSLPTRNSNW*LFHDRG
Trigger: CCCCCTGTCATGAAACAGCAACCAGTTGCTATTTCT...TGTCGGGAGGCTGTGCTGGTGGTCGTGTAGAGGTCCTTCTCCTTTCACATGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CAA 90 bp GGTTGCTCTTTCCATGTGACCGACAGGGTTTCAACTCGATGCCTTCAACCACGTGACAGGTGGCAGTGGTaGGCCAGACATAGCTACATC +
Preference number: 5 (lower is better)
Translates to: GCSFHVTDRVSTRCLQPRDRWQW*ARHSYI
Trigger: GATGTAGCTATGTCTGGCCAACCACTGCCACCTGTC...ACGTGGTTGAAGGCATCGAGTTGAAACCCTGTCGGTCACATGGAAAGAGCAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381285.8
CDS-3UTR CAA 90 bp CTGCTGTTCCAGGAGAGCTTGCCTTCGTTTCTCCAGTTCCAGGTTGCCACGTTCCTTCGTGGAGTTTTCTaGGTCTCTGATGCTCGTCCT +
Preference number: 5 (lower is better)
Translates to: LLFQESLPSFLQFQVATFLRGVF*VSDARP
Trigger: AGGACGAGCATCAGAGACCAAGAAAACTCCACGAAG...GAACGTGGCAACCTGGAACTGGAGAAACGAAGGCAAGCTCTCCTGGAACAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379960.9
CDS-3UTR CAA 90 bp CAGCCAGAGGGCATCGTTCTAAGGAAGGAGAGTCAGGGCCTGTTTGGGGTTGGTTTTTCTCTGCATAGTTaGCAGGGAACCACCCTGTCT +
Preference number: 5 (lower is better)
Translates to: QPEGIVLRKESQGLFGVGFSLHS*QGTTLS
Trigger: AGACAGGGTGGTTCCCTGCAAACTATGCAGAGAAAA...ACCAACCCCAAACAGGCCCTGACTCTCCTTCCTTAGAACGATGCCCTCTGGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CAA 90 bp AGAGCTTGCCTTCGTTTCTCCAGTTCCAGGTTGCCACGTTCAAAGTTCTCCCGCGGGCAGGGGCAGATGTaGAATCAGTCACTGGTTTCA +
Preference number: 5 (lower is better)
Translates to: RACLRFSSSRLPRSKFSRGQGQM*NQSLVS
Trigger: TGAAACCAGTGACTGATTCAACATCTGCCCCTGCCC...GCGGGAGAACTTTGAACGTGGCAACCTGGAACTGGAGAAACGAAGGCAAGCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379960.9
CDS-3UTR CAA 90 bp CTATGGGATTTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAACCCGAAACGACCGGCTaGGCTGCTGGAGAGGCTACT +
Preference number: 5 (lower is better)
Translates to: LWDFSDPRSHNETCSEDKPETTG*AAGEAT
Trigger: AGTAGCCTCTCCAGCAGCCAAGCCGGTCGTTTCGGG...TTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAAATCCCATAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CAA 90 bp TGTTGCCCTTTGGGAACGGACCAGGTACGCTTTCTCGCGCTTCTTTTTCTCAGTCTTTTTCCCACGTGCTaGCAGCTCTCCTTCCCACCA +
Preference number: 5 (lower is better)
Translates to: CCPLGTDQVRFLALLFLSLFPTC*QLSFPP
Trigger: TGGTGGGAAGGAGAGCTGCAAGCACGTGGGAAAAAG...ACTGAGAAAAAGAAGCGCGAGAAAGCGTACCTGGTCCGTTCCCAAAGGGCAACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000381285.8
CDS-3UTR CAA 90 bp CTTCAACCACGTTCACCATCAACCTTCCAATGCCTGTTGCCCTTTGGGAACGGAACCTTCCAATGCCTGTaGCCCTTTGGGAACGGACCA +
Preference number: 5 (lower is better)
Translates to: LQPRSPSTFQCLLPFGNGTFQCL*PFGNGP
Trigger: TGGTCCGTTCCCAAAGGGCAACAGGCATTGGAAGGT...TCCGTTCCCAAAGGGCAACAGGCATTGGAAGGTTGATGGTGAACGTGGTTGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000420666.1
CDS-3UTR CAA 90 bp AGCCAAAAGAGATTTTTCCAACATGGCTGCCAACCGAGACCCAGTGACCCAACAGAGCCCTGGTCTTTCTaGATGTCCGCCACACGGATC +
Preference number: 5 (lower is better)
Translates to: SQKRFFQHGCQPRPSDPTEPWSF*MSATRI
Trigger: GATCCGTGTGGCGGACATCAAGAAAGACCAGGGCTC...TGTTGGGTCACTGGGTCTCGGTTGGCAGCCATGTTGGAAAAATCTCTTTTGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000381318.8
CDS-3UTR CAA 90 bp GAAACTTCCATAGACCAGCTCTTCAAAGAGCTAAGCCAGGGCCTGATCAGACCGAGAGCAGAGGAACGCTaGCAGGGGTGTCTAAAAGGC +
Preference number: 5 (lower is better)
Translates to: ETSIDQLFKELSQGLIRPRAEER*QGCLKG
Trigger: GCCTTTTAGACACCCCTGCAAGCGTTCCTCTGCTCT...CGGTCTGATCAGGCCCTGGCTTAGCTCTTTGAAGAGCTGGTCTATGGAAGTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CAA 90 bp GACCGACAGGGTTTCAACTCGATGCCTTCAACCACGTTCACCATCAACCTTCCAGCCGGGTTCTCCAGTTaGGCTTTCATCCACCATGAC +
Preference number: 5 (lower is better)
Translates to: DRQGFNSMPSTTFTINLPAGFSS*AFIHHD
Trigger: GTCATGGTGGATGAAAGCCAAACTGGAGAACCCGGC...TGGAAGGTTGATGGTGAACGTGGTTGAAGGCATCGAGTTGAAACCCTGTCGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381285.8
CDS TCA 90 bp AACCAATGTATTGAGCTGGATTTCTACCCAACGAGTAAGGCTCCCTaGATCGCCCGTTCCCAGAGCTACCAGGCAGACACGGCATTCAAG +
Preference number: 5 (lower is better)
Translates to: NQCIELDFYPTSKAP*IARSQSYQADTAFK
Trigger: CTTGAATGCCGTGTCTGCCTGGTAGCTCTGGGAACGGGCGATTCAGGGAGCCTTACTCGTTGGGTAGAAATCCAGCTCAATACATTGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462212.5
ENST00000475422.5
ENST00000489261.1
CDS-3UTR CAA 90 bp GAGAGAGGGCTGGGCTGCCCATGCATCCCAGTTATCCGTTTCTGGTTTCTCATTGCCTGTATTTCAGTCTaGATGACTGAGGAACAGCCC +
Preference number: 5 (lower is better)
Translates to: ERGLGCPCIPVIRFWFLIACISV*MTEEQP
Trigger: GGGCTGTTCCTCAGTCATCAAGACTGAAATACAGGC...AATGAGAAACCAGAAACGGATAACTGGGATGCATGGGCAGCCCAGCCCTCTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379960.9
CDS-3UTR CAA 90 bp ACTGAAGTGCAACTGAACGAGGAGGAGAGGTCCTCGCTCTCTGCACCATGTGAAGCCTGTATTTCAGTCTaGATGACTGAGGAACAGCCC +
Preference number: 5 (lower is better)
Translates to: TEVQLNEEERSSLSAPCEACISV*MTEEQP
Trigger: GGGCTGTTCCTCAGTCATCAAGACTGAAATACAGGC...TTCACATGGTGCAGAGAGCGAGGACCTCTCCTCCTCGTTCAGTTGCACTTCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CAA 90 bp TGGGCTGCCCATGCATCCCAGTTATCCGTTTCTGGTTTCTCATTCGTGCTGGTGTTTCAAGTTCCCGTTTaGCAGCCTCTCGCCTCTCAA +
Preference number: 5 (lower is better)
Translates to: WAAHASQLSVSGFSFVLVFQVPV*QPLASQ
Trigger: TTGAGAGGCGAGAGGCTGCAAAACGGGAACTTGAAA...CACCAGCACGAATGAGAAACCAGAAACGGATAACTGGGATGCATGGGCAGCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379960.9
CDS-3UTR CAA 90 bp AAAAGGAATACAATTTCCAGACAGCATGTGTGGCCGTGGGCTGGGACCCTGCTGTTTCAAGTTCCCGTTTaGCAGCCTCTCGCCTCTCAA +
Preference number: 5 (lower is better)
Translates to: KRNTISRQHVWPWAGTLLFQVPV*QPLASQ
Trigger: TTGAGAGGCGAGAGGCTGCAAAACGGGAACTTGAAA...CAGCAGGGTCCCAGCCCACGGCCACACATGCTGTCTGGAAATTGTATTCCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CAA 90 bp AAGGGGCTAGACTCCCAGCTGCACCCTGTTGAGGGCTATGGGATTTCAGCGACCTTCCTGAGCTCGTCTTaGGGCTTCTTCTTTTTGTTT +
Preference number: 5 (lower is better)
Translates to: KGLDSQLHPVEGYGISATFLSSS*GFFFLF
Trigger: AAACAAAAAGAAGAAGCCCAAAGACGAGCTCAGGAA...GGTCGCTGAAATCCCATAGCCCTCAACAGGGTGCAGCTGGGAGTCTAGCCCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CAA 90 bp AACCACGTTCACCATCAACCTTCCAATGCCTGTTGCCCTTTGGGAACGGACCAGTCTTGTGCTTCCTGTTaGCCTTTTTCCTCGCCATCC +
Preference number: 5 (lower is better)
Translates to: NHVHHQPSNACCPLGTDQSCASC*PFSSPS
Trigger: GGATGGCGAGGAAAAAGGCAAACAGGAAGCACAAGA...CTGGTCCGTTCCCAAAGGGCAACAGGCATTGGAAGGTTGATGGTGAACGTGGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381285.8
CDS-3UTR CAA 90 bp AAGGCCAGTTTGGGGGCAGGGGCAGATGTTGAATCAGTCACTGGTTTCACTGGAAAAAGCCGACCCAGCTaGTCTTGTGCTTCCTGTTTG +
Preference number: 5 (lower is better)
Translates to: KASLGAGADVESVTGFTGKSRPS*SCASCL
Trigger: CAAACAGGAAGCACAAGACAAGCTGGGTCGGCTTTT...TCCAGTGAAACCAGTGACTGATTCAACATCTGCCCCTGCCCCCAAACTGGCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000379960.9
CDS-3UTR CAA 90 bp ACTGAAGTGCAACTGAACGAGGAGGAGAGGTCCTCGCTCTCTGCACCATGTGAATGGCTTAGCTGGTTCTaGGTGTTGATGGAAAAGCCG +
Preference number: 5 (lower is better)
Translates to: TEVQLNEEERSSLSAPCEWLSWF*VLMEKP
Trigger: CGGCTTTTCCATCAACACCAAGAACCAGCTAAGCCA...TTCACATGGTGCAGAGAGCGAGGACCTCTCCTCCTCGTTCAGTTGCACTTCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CAA 90 bp AGTTTGGGGGCAGGGGCAGATGTTGAATCAGTCACTGGTTTCACTGGAGCGGGATTTTCTCTGCATAGTTaGCAGGGAACCACCCTGTCT +
Preference number: 5 (lower is better)
Translates to: SLGAGADVESVTGFTGAGFSLHS*QGTTLS
Trigger: AGACAGGGTGGTTCCCTGCAAACTATGCAGAGAAAA...TCCCGCTCCAGTGAAACCAGTGACTGATTCAACATCTGCCCCTGCCCCCAAACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000379960.9
ENST00000419241.1
CDS-3UTR CAA 90 bp TCACTGGTTTCACTGGAGCGGGAACCTCATTTTCTGGGATTTTCTCTGCATAGTTCACGCAAGGCCAGTTaGGGGGCAGGGGCAGATGTT +
Preference number: 5 (lower is better)
Translates to: SLVSLEREPHFLGFSLHSSRKAS*GAGADV
Trigger: AACATCTGCCCCTGCCCCCAAACTGGCCTTGCGTGA...ACTATGCAGAGAAAATCCCAGAAAATGAGGTTCCCGCTCCAGTGAAACCAGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000379960.9
ENST00000419241.1
CDS-3UTR CAA 90 bp TATGGGATTTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAGTCACGCAAGGCCAGTTaGGGGGCAGGGGCAGATGTT +
Preference number: 5 (lower is better)
Translates to: YGISATLEAIMRPVVRTKSRKAS*GAGADV
Trigger: AACATCTGCCCCTGCCCCCAAACTGGCCTTGCGTGA...CTTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAAATCCCATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CAA 90 bp ACAGAATCCTCCTTAGGTGGCCTAAGGGGCACTTCTGGTGGCCAAGTACAGAAACGCGGCCCCAAGCAATaGGTCACTGAATTGAACACA +
Preference number: 5 (lower is better)
Translates to: TESSLGGLRGTSGGQVQKRGPKQ*VTELNT
Trigger: TGTGTTCAATTCAGTGACCAATTGCTTGGGGCCGCG...TTTCTGTACTTGGCCACCAGAAGTGCCCCTTAGGCCACCTAAGGAGGATTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CAA 90 bp TCTTTCCATGTGACCGACAGGGTTTCAACTCGATGCCTTCAACCACGTTCACCAACCTTCCAATGCCTGTaGCCCTTTGGGAACGGACCA +
Preference number: 5 (lower is better)
Translates to: SFHVTDRVSTRCLQPRSPTFQCL*PFGNGP
Trigger: TGGTCCGTTCCCAAAGGGCAACAGGCATTGGAAGGT...TGGTGAACGTGGTTGAAGGCATCGAGTTGAAACCCTGTCGGTCACATGGAAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000420666.1
CDS-3UTR CAA 90 bp CAGGATTCAGCACATTCAAGCACAGAACAGGTCACCAGCAACGACTGCTGCTATACCTTCCAATGCCTGTaGCCCTTTGGGAACGGACCA +
Preference number: 5 (lower is better)
Translates to: QDSAHSSTEQVTSNDCCYTFQCL*PFGNGP
Trigger: TGGTCCGTTCCCAAAGGGCAACAGGCATTGGAAGGT...ATAGCAGCAGTCGTTGCTGGTGACCTGTTCTGTGCTTGAATGTGCTGAATCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000381318.8
CDS-3UTR CAA 90 bp GGTGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGGCCGTGGGCGAGCCCTGGTCTTTCTaGATGTCCGCCACACGGATC +
Preference number: 5 (lower is better)
Translates to: GGFLEKEYNFQTACVAVGEPWSF*MSATRI
Trigger: GATCCGTGTGGCGGACATCAAGAAAGACCAGGGCTC...GCCCACGGCCACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CAA 90 bp GAAGGAACGGCTATAACGGTGCACATGCTGGAAACTTCCATAGACCAGCTCTTCTTGAGGGGCCTGTCTTaGCCATCCCATATCCCTGTG +
Preference number: 5 (lower is better)
Translates to: EGTAITVHMLETSIDQLFLRGLS*PSHIPV
Trigger: CACAGGGATATGGGATGGCAAAGACAGGCCCCTCAA...GAAGAGCTGGTCTATGGAAGTTTCCAGCATGTGCACCGTTATAGCCGTTCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000381318.8
CDS-3UTR CAA 90 bp TGTTGCCCTTTGGGAACGGACCAGGTACGCTTTCTCGCGCTTCTTTTTCTCAGTGGCCAAGAAGTCTACTaGGGGACTGGTGGATGTAAG +
Preference number: 5 (lower is better)
Translates to: CCPLGTDQVRFLALLFLSGQEVY*GTGGCK
Trigger: CTTACATCCACCAGTCCCCAAGTAGACTTCTTGGCC...ACTGAGAAAAAGAAGCGCGAGAAAGCGTACCTGGTCCGTTCCCAAAGGGCAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381285.8
CDS-3UTR CAA 90 bp CTATGGGATTTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAAAGTGTCTTAGGTCTTaGCCCCGGGATGTGCGGGGC +
Preference number: 5 (lower is better)
Translates to: LWDFSDPRSHNETCSEDKKCLRS*PRDVRG
Trigger: GCCCCGCACATCCCGGGGCAAAGACCTAAGACACTT...TTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAAATCCCATAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CAA 90 bp GGTGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGGCCGTGGGCGAGGACACCTGGGCTTaGGTACCAGGTCACCGAGAT +
Preference number: 5 (lower is better)
Translates to: GGFLEKEYNFQTACVAVGEDTWA*VPGHRD
Trigger: ATCTCGGTGACCTGGTACCAAAGCCCAGGTGTCCTC...GCCCACGGCCACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CAA 90 bp ATTGTTTCGGGGCAGGGAGGATTGTCGAGAATGATTCCTAGGAGCTTTGAGGGGCACTACACCCTTTCTTaGGTTCCTGTCTGCCTGAGG +
Preference number: 5 (lower is better)
Translates to: IVSGQGGLSRMIPRSFEGHYTLS*VPVCLR
Trigger: CCTCAGGCAGACAGGAACCAAAGAAAGGGTGTAGTG...CCCCTCAAAGCTCCTAGGAATCATTCTCGACAATCCTCCCTGCCCCGAAACAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CAA 90 bp CAGGATTCAGCACATTCAAGCACAGAACAGGTCACCAGCAACGACTGCTGCTATGGTGGAGCCGGCACCTaGAAATCTGCCAGTGAAAAC +
Preference number: 5 (lower is better)
Translates to: QDSAHSSTEQVTSNDCCYGGAGT*KSASEN
Trigger: GTTTTCACTGGCAGATTTCAAGGTGCCGGCTCCACC...ATAGCAGCAGTCGTTGCTGGTGACCTGTTCTGTGCTTGAATGTGCTGAATCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CAA 90 bp AAGGGGCTAGACTCCCAGCTGCACCCTGTTGAGGGCTATGGGATTTCAGCGACCGTGCCTCTAAGTGATTaGCAGATTATTCATGCACCT +
Preference number: 5 (lower is better)
Translates to: KGLDSQLHPVEGYGISATVPLSD*QIIHAP
Trigger: AGGTGCATGAATAATCTGCAAATCACTTAGAGGCAC...GGTCGCTGAAATCCCATAGCCCTCAACAGGGTGCAGCTGGGAGTCTAGCCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS TCA 90 bp AGGACCTCTCGTTATGTTGCGCTTTGTTATCAATTAGGGCAGACGTaGGCATGGCACCTCTCCAACAAGCACAGGCCAGACAAGCACACA +
Preference number: 5 (lower is better)
Translates to: RTSRYVALCYQLGQT*AWHLSNKHRPDKHT
Trigger: TGTGTGCTTGTCTGGCCTGTGCTTGTTGGAGAGGTGCCATGCTCACGTCTGCCCTAATTGATAACAAAGCGCAACATAACGAGAGGTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487427.5
CDS GCA 90 bp CTCAGAAACCACTGGGAGCCCGGCAGGGGCTTATTTCTATGTTGTTaGTGCAGATTCTCACTCCCAACGACACAGCCTTCTTCTTTATGG +
Preference number: 5 (lower is better)
Translates to: LRNHWEPGRGLFLCC*CRFSLPTTQPSSLW
Trigger: CCATAAAGAAGAAGGCTGTGTCGTTGGGAGTGAGAATCTGCAGCAACAACATAGAAATAAGCCCCTGCCGGGCTCCCAGTGGTTTCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000462212.5
ENST00000475422.5
ENST00000479424.5
ENST00000489261.1
CDS CCA 90 bp CCCAGATATCCAGGCTGCCACCAAAAGGTGTTGGAAACTGAGCCATaGTTCTGTTACTTTTACCTTGCTAATCGACGCCTCATCTCCGGG +
Preference number: 5 (lower is better)
Translates to: PRYPGCHQKVLETEP*FCYFYLANRRLISG
Trigger: CCCGGAGATGAGGCGTCGATTAGCAAGGTAAAAGTAACAGAACCATGGCTCAGTTTCCAACACCTTTTGGTGGCAGCCTGGATATCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000381285.8
ENST00000381291.8
ENST00000381318.8
ENST00000399349.5
ENST00000399352.5
ENST00000399353.5
ENST00000399355.6
ENST00000399367.7
ENST00000470742.5
CDS-3UTR CAA 90 bp CACCATGTGAAAGGAGAAGGACCTCTACACGACCACCAGCACAGCCTCCCGACATCTGTTACTTTTACCTaGCTAATCGACGCCTCATCT +
Preference number: 5 (lower is better)
Translates to: HHVKGEGPLHDHQHSLPTSVTFT*LIDASS
Trigger: AGATGAGGCGTCGATTAGCAAGGTAAAAGTAACAGA...TGTCGGGAGGCTGTGCTGGTGGTCGTGTAGAGGTCCTTCTCCTTTCACATGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CAA 90 bp ACAGAATCCTCCTTAGGTGGCCTAAGGGGCACTTCTGGTGGCCAAGTACAGAAATGCCACCAAAAGGTGTaGGAAACTGAGCCATGGTTC +
Preference number: 5 (lower is better)
Translates to: TESSLGGLRGTSGGQVQKCHQKV*ETEPWF
Trigger: GAACCATGGCTCAGTTTCCAACACCTTTTGGTGGCA...TTTCTGTACTTGGCCACCAGAAGTGCCCCTTAGGCCACCTAAGGAGGATTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CAA 90 bp AAAAGGAATACAATTTCCAGACAGCATGTGTGGCCGTGGGCTGGGACCCTGCTGAGAAATAGCAACTGGTaGCTGTTTCATGACAGGGGG +
Preference number: 5 (lower is better)
Translates to: KRNTISRQHVWPWAGTLLRNSNW*LFHDRG
Trigger: CCCCCTGTCATGAAACAGCAACCAGTTGCTATTTCT...CAGCAGGGTCCCAGCCCACGGCCACACATGCTGTCTGGAAATTGTATTCCTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CAA 90 bp GGGCTGGGCTGCCCATGCATCCCAGTTATCCGTTTCTGGTTTCTCATTCGTGCTCAGAAGATACTAGGGTaGGAGACATTCCAACAACTG +
Preference number: 5 (lower is better)
Translates to: GLGCPCIPVIRFWFLIRAQKILG*ETFQQL
Trigger: CAGTTGTTGGAATGTCTCCAACCCTAGTATCTTCTG...AGCACGAATGAGAAACCAGAAACGGATAACTGGGATGCATGGGCAGCCCAGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379960.9
CDS-3UTR CAA 90 bp CAACTCGATGCCTTCAACCACGTTCACCATCAACCTTCCAATGCCTGTTGCCCTGCCTGTATTTCAGTCTaGATGACTGAGGAACAGCCC +
Preference number: 5 (lower is better)
Translates to: QLDAFNHVHHQPSNACCPACISV*MTEEQP
Trigger: GGGCTGTTCCTCAGTCATCAAGACTGAAATACAGGC...AGGGCAACAGGCATTGGAAGGTTGATGGTGAACGTGGTTGAAGGCATCGAGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381285.8
CDS-3UTR CAA 90 bp TGGGCTGCCCATGCATCCCAGTTATCCGTTTCTGGTTTCTCATTCGTGCTGGTGCAGAAAGATTCCATATaGAAGCCAGCTGAGCCTGTG +
Preference number: 5 (lower is better)
Translates to: WAAHASQLSVSGFSFVLVQKDSI*KPAEPV
Trigger: CACAGGCTCAGCTGGCTTCAATATGGAATCTTTCTG...CACCAGCACGAATGAGAAACCAGAAACGGATAACTGGGATGCATGGGCAGCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379960.9
CDS-3UTR CAA 90 bp CCCTTTGGGAACGGACCAGGTACGCTTTCTCGCGCTTCTTTTTCTCAGTCTCTATTCTCCAGTTCCAGGTaGCCACGTTCAAAGTTCTCC +
Preference number: 5 (lower is better)
Translates to: PFGNGPGTLSRASFSQSLFSSSR*PRSKFS
Trigger: GGAGAACTTTGAACGTGGCAACCTGGAACTGGAGAA...TAGAGACTGAGAAAAAGAAGCGCGAGAAAGCGTACCTGGTCCGTTCCCAAAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381285.8
CDS-3UTR CAA 90 bp CCAAATGGTGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGGCCAGGCGCTCCTGCTCCTaGCGCTGCTGTTCCAGGAGA +
Preference number: 5 (lower is better)
Translates to: PNGGFLEKEYNFQTACVARRSCS*RCCSRR
Trigger: TCTCCTGGAACAGCAGCGCAAGGAGCAGGAGCGCCT...GGCCACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCACCATTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CAA 90 bp CAACCAGATAAATCTGAGACCGAACAAAAACACAGAGTGCTTTCTCATGTGGCTAGGCGCTCCTGCTCCTaGCGCTGCTGTTCCAGGAGA +
Preference number: 5 (lower is better)
Translates to: QPDKSETEQKHRVLSHVARRSCS*RCCSRR
Trigger: TCTCCTGGAACAGCAGCGCAAGGAGCAGGAGCGCCT...AGCCACATGAGAAAGCACTCTGTGTTTTTGTTCGGTCTCAGATTTATCTGGTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CAA 90 bp GGTTGCTCTTTCCATGTGACCGACAGGGTTTCAACTCGATGCCTTCAACCACGTTTTCAAGTTCCCGTTTaGCAGCCTCTCGCCTCTCAA +
Preference number: 5 (lower is better)
Translates to: GCSFHVTDRVSTRCLQPRFQVPV*QPLASQ
Trigger: TTGAGAGGCGAGAGGCTGCAAAACGGGAACTTGAAA...ACGTGGTTGAAGGCATCGAGTTGAAACCCTGTCGGTCACATGGAAAGAGCAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381285.8
CDS-3UTR CAA 90 bp ATTGTTTCGGGGCAGGGAGGATTGTCGAGAATGATTCCTAGGAGCTTTGAGGGGTTTCAAGTTCCCGTTTaGCAGCCTCTCGCCTCTCAA +
Preference number: 5 (lower is better)
Translates to: IVSGQGGLSRMIPRSFEGFQVPV*QPLASQ
Trigger: TTGAGAGGCGAGAGGCTGCAAAACGGGAACTTGAAA...CCCCTCAAAGCTCCTAGGAATCATTCTCGACAATCCTCCCTGCCCCGAAACAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CAA 90 bp AGAGCTTGCCTTCGTTTCTCCAGTTCCAGGTTGCCACGTTCAAAGTTCTCCCGCAGCCTCCATGGACTTTaGCTTCTGGAGTTGTTGCTT +
Preference number: 5 (lower is better)
Translates to: RACLRFSSSRLPRSKFSRSLHGL*LLELLL
Trigger: AAGCAACAACTCCAGAAGCAAAAGTCCATGGAGGCT...GCGGGAGAACTTTGAACGTGGCAACCTGGAACTGGAGAAACGAAGGCAAGCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379960.9
CDS-3UTR CAA 90 bp CTTCAACCACGTTCACCATCAACCTTCCAATGCCTGTTGCCCTTTGGGAACGGACTTCGTGGAGTTTTCTaGGTCTCTGATGCTCGTCCT +
Preference number: 5 (lower is better)
Translates to: LQPRSPSTFQCLLPFGNGLRGVF*VSDARP
Trigger: AGGACGAGCATCAGAGACCAAGAAAACTCCACGAAG...TCCGTTCCCAAAGGGCAACAGGCATTGGAAGGTTGATGGTGAACGTGGTTGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381285.8
CDS-3UTR CAA 90 bp ACAGAATCCTCCTTAGGTGGCCTAAGGGGCACTTCTGGTGGCCAAGTACAGAAATCTTGTGCTTCCTGTTaGCCTTTTTCCTCGCCATCC +
Preference number: 5 (lower is better)
Translates to: TESSLGGLRGTSGGQVQKSCASC*PFSSPS
Trigger: GGATGGCGAGGAAAAAGGCAAACAGGAAGCACAAGA...TTTCTGTACTTGGCCACCAGAAGTGCCCCTTAGGCCACCTAAGGAGGATTCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CAA 90 bp ATTGTTTCGGGGCAGGGAGGATTGTCGAGAATGATTCCTAGGAGCTTTGAGGGGTCTTGTGCTTCCTGTTaGCCTTTTTCCTCGCCATCC +
Preference number: 5 (lower is better)
Translates to: IVSGQGGLSRMIPRSFEGSCASC*PFSSPS
Trigger: GGATGGCGAGGAAAAAGGCAAACAGGAAGCACAAGA...CCCCTCAAAGCTCCTAGGAATCATTCTCGACAATCCTCCCTGCCCCGAAACAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CAA 90 bp ATTGTTTCGGGGCAGGGAGGATTGTCGAGAATGATTCCTAGGAGCTTTGAGGGGAAAAGCCGACCCAGCTaGTCTTGTGCTTCCTGTTTG +
Preference number: 5 (lower is better)
Translates to: IVSGQGGLSRMIPRSFEGKSRPS*SCASCL
Trigger: CAAACAGGAAGCACAAGACAAGCTGGGTCGGCTTTT...CCCCTCAAAGCTCCTAGGAATCATTCTCGACAATCCTCCCTGCCCCGAAACAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CAA 90 bp TCAATTTCTTTCCTCCTCTCCTCCTCTCTCTGCCGTTCTAGCTCCCGCTGCTTTTGGCTTAGCTGGTTCTaGGTGTTGATGGAAAAGCCG +
Preference number: 5 (lower is better)
Translates to: SISFLLSSSLCRSSSRCFWLSWF*VLMEKP
Trigger: CGGCTTTTCCATCAACACCAAGAACCAGCTAAGCCA...AAAGCAGCGGGAGCTAGAACGGCAGAGAGAGGAGGAGAGGAGGAAAGAAATTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379960.9
CDS-3UTR CAA 90 bp ATTGTTTCGGGGCAGGGAGGATTGTCGAGAATGATTCCTAGGAGCTTTGAGGGGTGGCTTAGCTGGTTCTaGGTGTTGATGGAAAAGCCG +
Preference number: 5 (lower is better)
Translates to: IVSGQGGLSRMIPRSFEGWLSWF*VLMEKP
Trigger: CGGCTTTTCCATCAACACCAAGAACCAGCTAAGCCA...CCCCTCAAAGCTCCTAGGAATCATTCTCGACAATCCTCCCTGCCCCGAAACAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CAA 90 bp GTTTCTAAACTCACACCAAGGACTGGGCATTGTAGGCCAAGAAGTCTACTTGGGGCCGGGTTCTCCAGTTaGGCTTTCATCCACCCATTC +
Preference number: 5 (lower is better)
Translates to: VSKLTPRTGHCRPRSLLGAGFSS*AFIHPF
Trigger: GAATGGGTGGATGAAAGCCAAACTGGAGAACCCGGC...CCCAAGTAGACTTCTTGGCCTACAATGCCCAGTCCTTGGTGTGAGTTTAGAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CAA 90 bp CAGCCAGAGGGCATCGTTCTAAGGAAGGAGAGTCAGGGCCTGTTTGGGGTTGGTAAGTGGTTGTCTTTTTaGGCTCTCCAAGGATATAGG +
Preference number: 5 (lower is better)
Translates to: QPEGIVLRKESQGLFGVGKWLSF*ALQGYR
Trigger: CCTATATCCTTGGAGAGCCAAAAAAGACAACCACTT...ACCAACCCCAAACAGGCCCTGACTCTCCTTCCTTAGAACGATGCCCTCTGGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CAA 90 bp CAACCAGATAAATCTGAGACCGAACAAAAACACAGAGTGCTTTCTCATGTGGCTCCCGAAACGACCGGCTaGGCTGCTGGAGAGGCTACT +
Preference number: 5 (lower is better)
Translates to: QPDKSETEQKHRVLSHVAPETTG*AAGEAT
Trigger: AGTAGCCTCTCCAGCAGCCAAGCCGGTCGTTTCGGG...AGCCACATGAGAAAGCACTCTGTGTTTTTGTTCGGTCTCAGATTTATCTGGTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CAA 90 bp GATAAATCTGAGACCGAACAAAAACACAGAGTGCTTTCTCATGTGGCTACAAGGCCCGAAACGACCGGCTaGGCTGCTGGAGAGGCTACT +
Preference number: 5 (lower is better)
Translates to: DKSETEQKHRVLSHVATRPETTG*AAGEAT
Trigger: AGTAGCCTCTCCAGCAGCCAAGCCGGTCGTTTCGGG...CCTTGTAGCCACATGAGAAAGCACTCTGTGTTTTTGTTCGGTCTCAGATTTATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CAA 90 bp GGGATTTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAGGAATCCCCGGACATCTTCTaGCGGACTCTCAGCGCTTTT +
Preference number: 5 (lower is better)
Translates to: GISATLEAIMRPVVRTKESPDIF*RTLSAF
Trigger: AAAAGCGCTGAGAGTCCGCAAGAAGATGTCCGGGGA...TTCCTTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAAATCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CAA 90 bp CTATGGGATTTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAAATGCCTGTTGCCCTTaGGGAACGGACCAGGTACGC +
Preference number: 5 (lower is better)
Translates to: LWDFSDPRSHNETCSEDKNACCP*GTDQVR
Trigger: GCGTACCTGGTCCGTTCCCAAAGGGCAACAGGCATT...TTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAAATCCCATAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CAA 90 bp AACTCGATGCCTTCAACCACGTTCACCATCAACCTTCCAATGCCTGTTGCCCTTACCTCACAGTACGGGTaGCTCTTTCCATGTGACCGA +
Preference number: 5 (lower is better)
Translates to: NSMPSTTFTINLPMPVALTSQYG*LFPCDR
Trigger: TCGGTCACATGGAAAGAGCAACCCGTACTGTGAGGT...AAGGGCAACAGGCATTGGAAGGTTGATGGTGAACGTGGTTGAAGGCATCGAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000420666.1
CDS-3UTR CAA 90 bp GGAACGGACCAGGTACGCTTTCTCGCGCTTCTTTTTCTCAGTCTCTATGTAGAGCAGTTGGAATTCCACTaGGGGTTCAGAGTGTCCTGG +
Preference number: 5 (lower is better)
Translates to: GTDQVRFLALLFLSLYVEQLEFH*GFRVSW
Trigger: CCAGGACACTCTGAACCCCAAGTGGAATTCCAACTG...CTCTACATAGAGACTGAGAAAAAGAAGCGCGAGAAAGCGTACCTGGTCCGTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381285.8
CDS-3UTR CAA 90 bp GGTGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGGCCGTGGGCTTGAGGGGCCTGTCTTaGCCATCCCATATCCCTGTG +
Preference number: 5 (lower is better)
Translates to: GGFLEKEYNFQTACVAVGLRGLS*PSHIPV
Trigger: CACAGGGATATGGGATGGCAAAGACAGGCCCCTCAA...GCCCACGGCCACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CAA 90 bp GGTGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGGCCGTGGGCTCGGGGCAGGGAGGATaGTCGAGAATGATTCCTAGG +
Preference number: 5 (lower is better)
Translates to: GGFLEKEYNFQTACVAVGSGQGG*SRMIPR
Trigger: CCTAGGAATCATTCTCGACAATCCTCCCTGCCCCGA...GCCCACGGCCACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CAA 90 bp GGGCACTTCTGGTGGCCAAGTACAGAAAGTCTGTGCCCCAGAAGCAGCCTGGACCCATTTGATCAAGCATaGAACGTCCCTAAAATGAAC +
Preference number: 5 (lower is better)
Translates to: GHFWWPSTESLCPRSSLDPFDQA*NVPKMN
Trigger: GTTCATTTTAGGGACGTTCAATGCTTGATCAAATGG...GTCCAGGCTGCTTCTGGGGCACAGACTTTCTGTACTTGGCCACCAGAAGTGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CAA 90 bp ATTGTTTCGGGGCAGGGAGGATTGTCGAGAATGATTCCTAGGAGCTTTGAGGGGCCGCACCTGGCCGGTTaGCATTATTTCTCTGAAGAA +
Preference number: 5 (lower is better)
Translates to: IVSGQGGLSRMIPRSFEGPHLAG*HYFSEE
Trigger: TTCTTCAGAGAAATAATGCAAACCGGCCAGGTGCGG...CCCCTCAAAGCTCCTAGGAATCATTCTCGACAATCCTCCCTGCCCCGAAACAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CAA 90 bp TTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAGGAAAACACCAAGGTTTCGCCACGTaGGCCAGGCTGTTCTCGAAC +
Preference number: 5 (lower is better)
Translates to: FSDPRSHNETCSEDKGKHQGFAT*ARLFSN
Trigger: GTTCGAGAACAGCCTGGCCAACGTGGCGAAACCTTG...GTGTTTTCCTTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CAA 90 bp CACCATGTGAAAGGAGAAGGACCTCTACACGACCACCAGCACAGCCTCCCGACAACGACCTCAGTGGTGTaGTCTACTGATTTTATGCTA +
Preference number: 5 (lower is better)
Translates to: HHVKGEGPLHDHQHSLPTTTSVV*STDFML
Trigger: TAGCATAAAATCAGTAGACAACACCACTGAGGTCGT...TGTCGGGAGGCTGTGCTGGTGGTCGTGTAGAGGTCCTTCTCCTTTCACATGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS TCA 90 bp ATCTTACCCACTGGTCAAGATGCAGCTCAAGTGCCACTTCTGCAATaGAGCTTCCTTCATCAACCCAGGCAGGAGAAGTTGACTGTGTCC +
Preference number: 5 (lower is better)
Translates to: ILPTGQDAAQVPLLQ*SFLHQPRQEKLTVS
Trigger: GGACACAGTCAACTTCTCCTGCCTGGGTTGATGAAGGAAGCTTCATTGCAGAAGTGGCACTTGAGCTGCATCTTGACCAGTGGGTAAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465143.1
CDS CCA 90 bp ACCACTGCCAGATCGAACTCTTCTAAAAGAAGGTGGAATGTATTCTaGAGGCAGGACAGGTGGCAGTGGTTGGCCAGACATAGCTACATC +
Preference number: 5 (lower is better)
Translates to: TTARSNSSKRRWNVF*RQDRWQWLARHSYI
Trigger: GATGTAGCTATGTCTGGCCAACCACTGCCACCTGTCCTGCCTCCAGAATACATTCCACCTTCTTTTAGAAGAGTTCGATCTGGCAGTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000379960.9
ENST00000381283.7
ENST00000381285.8
ENST00000381291.8
ENST00000381318.8
ENST00000399338.8
ENST00000399349.5
ENST00000399352.5
ENST00000399353.5
ENST00000399355.6
ENST00000399367.7
ENST00000488166.1
CDS CCA 90 bp CCTCCCAGGTTCACAGATGAACACATCAAAACCAATGTATTGAGCTaGATTTCTACCCAACGAGTAAGGCTCCCTGAATCGCCCGTTCCC +
Preference number: 5 (lower is better)
Translates to: PPRFTDEHIKTNVLS*ISTQRVRLPESPVP
Trigger: GGGAACGGGCGATTCAGGGAGCCTTACTCGTTGGGTAGAAATCCAGCTCAATACATTGGTTTTGATGTGTTCATCTGTGAACCTGGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462212.5
ENST00000475422.5
ENST00000489261.1
CDS-3UTR CAA 90 bp GTCCCTCTCGAACACAGTGATGCAGAGGACTTCCTGCTCCAGGTCTCGGATGAATCTGTTACTTTTACCTaGCTAATCGACGCCTCATCT +
Preference number: 5 (lower is better)
Translates to: VPLEHSDAEDFLLQVSDESVTFT*LIDASS
Trigger: AGATGAGGCGTCGATTAGCAAGGTAAAAGTAACAGA...TTCATCCGAGACCTGGAGCAGGAAGTCCTCTGCATCACTGTGTTCGAGAGGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381285.8
CDS-3UTR CAA 90 bp CTGCACCATGTGAAAGGAGAAGGACCTCTACACGACCACCAGCACAGCCTCCCGTATGGAAAACTCCACTaGATCCATTCTTCCATCATT +
Preference number: 5 (lower is better)
Translates to: LHHVKGEGPLHDHQHSLPYGKLH*IHSSII
Trigger: AATGATGGAAGAATGGATCAAGTGGAGTTTTCCATA...CGGGAGGCTGTGCTGGTGGTCGTGTAGAGGTCCTTCTCCTTTCACATGGTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CAA 90 bp ATTGTTTCGGGGCAGGGAGGATTGTCGAGAATGATTCCTAGGAGCTTTGAGGGGAGAAATAGCAACTGGTaGCTGTTTCATGACAGGGGG +
Preference number: 5 (lower is better)
Translates to: IVSGQGGLSRMIPRSFEGRNSNW*LFHDRG
Trigger: CCCCCTGTCATGAAACAGCAACCAGTTGCTATTTCT...CCCCTCAAAGCTCCTAGGAATCATTCTCGACAATCCTCCCTGCCCCGAAACAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CAA 90 bp TGTCCTACAACAATCAGGATTCAGCACATTCAAGCACAGAACAGGTCACCAGCACTGGAATGGATCCCATaGGCACTGGAGCAACAGCTG +
Preference number: 5 (lower is better)
Translates to: CPTTIRIQHIQAQNRSPALEWIP*ALEQQL
Trigger: CAGCTGTTGCTCCAGTGCCAATGGGATCCATTCCAG...TGCTGGTGACCTGTTCTGTGCTTGAATGTGCTGAATCCTGATTGTTGTAGGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CAA 90 bp ACTGAAGTGCAACTGAACGAGGAGGAGAGGTCCTCGCTCTCTGCACCATGTGAACAGAAGATACTAGGGTaGGAGACATTCCAACAACTG +
Preference number: 5 (lower is better)
Translates to: TEVQLNEEERSSLSAPCEQKILG*ETFQQL
Trigger: CAGTTGTTGGAATGTCTCCAACCCTAGTATCTTCTG...TTCACATGGTGCAGAGAGCGAGGACCTCTCCTCCTCGTTCAGTTGCACTTCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CAA 90 bp CTATGGGATTTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAAAATGCAGGCAGAGGTaGTATAACAGGGGGAGCCCC +
Preference number: 5 (lower is better)
Translates to: LWDFSDPRSHNETCSEDKKCRQR*YNRGSP
Trigger: GGGGCTCCCCCTGTTATACAACCTCTGCCTGCATTT...TTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAAATCCCATAG
50% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CAA 90 bp AACAGGGCTTCAGCTACAGCATATCTAACACACAAACGGACCATGAGCTCCATTAAATGCAGGCAGAGGTaGTATAACAGGGGGAGCCCC +
Preference number: 5 (lower is better)
Translates to: NRASATAYLTHKRTMSSIKCRQR*YNRGSP
Trigger: GGGGCTCCCCCTGTTATACAACCTCTGCCTGCATTT...AATGGAGCTCATGGTCCGTTTGTGTGTTAGATATGCTGTAGCTGAAGCCCTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CAA 90 bp GACCGACAGGGTTTCAACTCGATGCCTTCAACCACGTTCACCATCAACCTTCCACAGAAAGATTCCATATaGAAGCCAGCTGAGCCTGTG +
Preference number: 5 (lower is better)
Translates to: DRQGFNSMPSTTFTINLPQKDSI*KPAEPV
Trigger: CACAGGCTCAGCTGGCTTCAATATGGAATCTTTCTG...TGGAAGGTTGATGGTGAACGTGGTTGAAGGCATCGAGTTGAAACCCTGTCGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381285.8
CDS-3UTR CAA 90 bp CTATGGGATTTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAGACAGGTGGCAGTGGTaGGCCAGACATAGCTACATC +
Preference number: 5 (lower is better)
Translates to: LWDFSDPRSHNETCSEDKDRWQW*ARHSYI
Trigger: GATGTAGCTATGTCTGGCCAACCACTGCCACCTGTC...TTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAAATCCCATAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CAA 90 bp CTTATGGTGGCTCAGACTATACTGTCTGAGGGCTTCATCATGCTACCGGTTTCTCTGTTCCAGGAGAGCTaGCCTTCGTTTCTCCAGTTC +
Preference number: 5 (lower is better)
Translates to: LMVAQTILSEGFIMLPVSLFQES*PSFLQF
Trigger: GAACTGGAGAAACGAAGGCAAGCTCTCCTGGAACAG...AGAAACCGGTAGCATGATGAAGCCCTCAGACAGTATAGTCTGAGCCACCATAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CAA 90 bp AACAGGGCTTCAGCTACAGCATATCTAACACACAAACGGACCATGAGCTCCATTAGTTCCAGTTGTCTTTaGCGCTCTTGCTCCTGGCGC +
Preference number: 5 (lower is better)
Translates to: NRASATAYLTHKRTMSSISSSCL*RSCSWR
Trigger: GCGCCAGGAGCAAGAGCGCAAAAGACAACTGGAACT...AATGGAGCTCATGGTCCGTTTGTGTGTTAGATATGCTGTAGCTGAAGCCCTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CAA 90 bp TTGCTCTTTCCATGTGACCGACAGGGTTTCAACTCGATGCCTTCAACCACGTTCCTTCTCCAGTTCCAGTaGTCTTTTGCGCTCTTGCTC +
Preference number: 5 (lower is better)
Translates to: LLFPCDRQGFNSMPSTTFLLQFQ*SFALLL
Trigger: GAGCAAGAGCGCAAAAGACAACTGGAACTGGAGAAG...GAACGTGGTTGAAGGCATCGAGTTGAAACCCTGTCGGTCACATGGAAAGAGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381285.8
CDS-3UTR CAA 90 bp GTTGACCAGCCAATTACTTCCTCCGTGTCAGGTCTAACCAGAAGAGGTCTGCATCTTCTCCAGTTCCAGTaGTCTTTTGCGCTCTTGCTC +
Preference number: 5 (lower is better)
Translates to: VDQPITSSVSGLTRRGLHLLQFQ*SFALLL
Trigger: GAGCAAGAGCGCAAAAGACAACTGGAACTGGAGAAG...ATGCAGACCTCTTCTGGTTAGACCTGACACGGAGGAAGTAATTGGCTGGTCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CAA 90 bp CTGCACCATGTGAAAGGAGAAGGACCTCTACACGACCACCAGCACAGCCTCCCGTTGCTTCTGGAGTTGTaGCTTATTGTGTATTTCTCT +
Preference number: 5 (lower is better)
Translates to: LHHVKGEGPLHDHQHSLPLLLEL*LIVYFS
Trigger: AGAGAAATACACAATAAGCAACAACTCCAGAAGCAA...CGGGAGGCTGTGCTGGTGGTCGTGTAGAGGTCCTTCTCCTTTCACATGGTGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CAA 90 bp TACAATTTCCAGACAGCATGTGTGGCCGTGGGCTGGGACCCTGCTGAGCACACCCTTTTGCTTCTGGAGTaGTTGCTTATTGTGTATTTC +
Preference number: 5 (lower is better)
Translates to: YNFQTACVAVGWDPAEHTLLLLE*LLIVYF
Trigger: GAAATACACAATAAGCAACAACTCCAGAAGCAAAAG...GGTGTGCTCAGCAGGGTCCCAGCCCACGGCCACACATGCTGTCTGGAAATTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CAA 90 bp TCTTTCCATGTGACCGACAGGGTTTCAACTCGATGCCTTCAACCACGTTCACCAAAAAGCCGACCCAGCTaGTCTTGTGCTTCCTGTTTG +
Preference number: 5 (lower is better)
Translates to: SFHVTDRVSTRCLQPRSPKSRPS*SCASCL
Trigger: CAAACAGGAAGCACAAGACAAGCTGGGTCGGCTTTT...TGGTGAACGTGGTTGAAGGCATCGAGTTGAAACCCTGTCGGTCACATGGAAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381285.8
CDS-3UTR CAA 90 bp GCTTTGAGGGGCCTGTCTTTGCCATCCCATATCCCTGTGACTGAATACCAAATGTGGCTTAGCTGGTTCTaGGTGTTGATGGAAAAGCCG +
Preference number: 5 (lower is better)
Translates to: ALRGLSLPSHIPVTEYQMWLSWF*VLMEKP
Trigger: CGGCTTTTCCATCAACACCAAGAACCAGCTAAGCCA...CATTTGGTATTCAGTCACAGGGATATGGGATGGCAAAGACAGGCCCCTCAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CAA 90 bp CTTCAACCACGTTCACCATCAACCTTCCAATGCCTGTTGCCCTTTGGGAACGGATTTTCTCTGCATAGTTaGCAGGGAACCACCCTGTCT +
Preference number: 5 (lower is better)
Translates to: LQPRSPSTFQCLLPFGNGFSLHS*QGTTLS
Trigger: AGACAGGGTGGTTCCCTGCAAACTATGCAGAGAAAA...TCCGTTCCCAAAGGGCAACAGGCATTGGAAGGTTGATGGTGAACGTGGTTGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381285.8
CDS-3UTR CAA 90 bp CAGGATTCAGCACATTCAAGCACAGAACAGGTCACCAGCAACGACTGCTGCTATCCAACCCTTCTGACCTaGAACTTCTCCAAACCACCA +
Preference number: 5 (lower is better)
Translates to: QDSAHSSTEQVTSNDCCYPTLLT*NFSKPP
Trigger: TGGTGGTTTGGAGAAGTTCAAGGTCAGAAGGGTTGG...ATAGCAGCAGTCGTTGCTGGTGACCTGTTCTGTGCTTGAATGTGCTGAATCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CAA 90 bp GCTTTGAGGGGCCTGTCTTTGCCATCCCATATCCCTGTGACTGAATACCAAATGCCAACCCTTCTGACCTaGAACTTCTCCAAACCACCA +
Preference number: 5 (lower is better)
Translates to: ALRGLSLPSHIPVTEYQMPTLLT*NFSKPP
Trigger: TGGTGGTTTGGAGAAGTTCAAGGTCAGAAGGGTTGG...CATTTGGTATTCAGTCACAGGGATATGGGATGGCAAAGACAGGCCCCTCAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CAA 90 bp CTATGGGATTTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAACTTTTTCCCACGTGCTaGCAGCTCTCCTTCCCACCA +
Preference number: 5 (lower is better)
Translates to: LWDFSDPRSHNETCSEDKLFPTC*QLSFPP
Trigger: TGGTGGGAAGGAGAGCTGCAAGCACGTGGGAAAAAG...TTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAAATCCCATAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CAA 90 bp TATGGGATTTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAGCTTTTTCCCACGTGCTaGCAGCTCTCCTTCCCACCA +
Preference number: 5 (lower is better)
Translates to: YGISATLEAIMRPVVRTKLFPTC*QLSFPP
Trigger: TGGTGGGAAGGAGAGCTGCAAGCACGTGGGAAAAAG...CTTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAAATCCCATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CAA 90 bp AGCACAGAACAGGTCACCAGCAACGACTGCTGCTATGAAATATCACAGGCCTCCCTCGTGGATGTATCCTaGTCGCTTTCTTTCAGTTGG +
Preference number: 5 (lower is better)
Translates to: STEQVTSNDCCYEISQASLVDVS*SLSFSW
Trigger: CCAACTGAAAGAAAGCGACAAGGATACATCCACGAG...GGAGGCCTGTGATATTTCATAGCAGCAGTCGTTGCTGGTGACCTGTTCTGTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000381318.8
CDS-3UTR CAA 90 bp GGTTCAAGATACACAGGAAGAGCAATTTGTACTGATGTTGCTACTGGTTTAAAGATCAGGGCAGCCCCGTaGAGCTGGCGGCTGCAGAAG +
Preference number: 5 (lower is better)
Translates to: GSRYTGRAICTDVATGLKIRAAP*SWRLQK
Trigger: CTTCTGCAGCCGCCAGCTCAACGGGGCTGCCCTGAT...CTTTAAACCAGTAGCAACATCAGTACAAATTGCTCTTCCTGTGTATCTTGAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CAA 90 bp TGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGGCCGTGGGCTGCCACTGTGCAGAAATTaGCGCGGCCCCAAGCAATTG +
Preference number: 5 (lower is better)
Translates to: WFLRKGIQFPDSMCGRGLPLCRN*RGPKQL
Trigger: CAATTGCTTGGGGCCGCGCAAATTTCTGCACAGTGG...CAGCCCACGGCCACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CAA 90 bp TTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAGGAAAACACACCTTCCAATGCCTGTaGCCCTTTGGGAACGGACCA +
Preference number: 5 (lower is better)
Translates to: FSDPRSHNETCSEDKGKHTFQCL*PFGNGP
Trigger: TGGTCCGTTCCCAAAGGGCAACAGGCATTGGAAGGT...GTGTTTTCCTTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CAA 90 bp GGTTTCAACTCGATGCCTTCAACCACGTTCACCATCAACCTTCCAATGCCTGTTACCTCACAGTACGGGTaGCTCTTTCCATGTGACCGA +
Preference number: 5 (lower is better)
Translates to: GFNSMPSTTFTINLPMPVTSQYG*LFPCDR
Trigger: TCGGTCACATGGAAAGAGCAACCCGTACTGTGAGGT...AACAGGCATTGGAAGGTTGATGGTGAACGTGGTTGAAGGCATCGAGTTGAAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000420666.1
CDS-3UTR CAA 90 bp CTTATGGTGGCTCAGACTATACTGTCTGAGGGCTTCATCATGCTACCGGTTTCTGGCCAAGAAGTCTACTaGGGGACTGGTGGATGTAAG +
Preference number: 5 (lower is better)
Translates to: LMVAQTILSEGFIMLPVSGQEVY*GTGGCK
Trigger: CTTACATCCACCAGTCCCCAAGTAGACTTCTTGGCC...AGAAACCGGTAGCATGATGAAGCCCTCAGACAGTATAGTCTGAGCCACCATAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CAA 90 bp ACGCTATTAATGAAATGCCCCTGGAGAACACTTGCAGAACTTCCCGTAGTCCGGGAGAAACACAAGCATTaGGTCTCACTGGTCCACTCC +
Preference number: 5 (lower is better)
Translates to: TLLMKCPWRTLAELPVVREKHKH*VSLVHS
Trigger: GGAGTGGACCAGTGAGACCAAATGCTTGTGTTTCTC...CCGGACTACGGGAAGTTCTGCAAGTGTTCTCCAGGGGCATTTCATTAATAGCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CAA 90 bp ATTGTTTCGGGGCAGGGAGGATTGTCGAGAATGATTCCTAGGAGCTTTGAGGGGCCTCGCATTTTCATTTaGCACTCTGTCCGCAAACCA +
Preference number: 5 (lower is better)
Translates to: IVSGQGGLSRMIPRSFEGPRIFI*HSVRKP
Trigger: TGGTTTGCGGACAGAGTGCAAAATGAAAATGCGAGG...CCCCTCAAAGCTCCTAGGAATCATTCTCGACAATCCTCCCTGCCCCGAAACAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CAA 90 bp ATTGTTTCGGGGCAGGGAGGATTGTCGAGAATGATTCCTAGGAGCTTTGAGGGGAAAAAGGGGCTCCAGTaGCTGGTTGACAGCATTAAG +
Preference number: 5 (lower is better)
Translates to: IVSGQGGLSRMIPRSFEGKKGLQ*LVDSIK
Trigger: CTTAATGCTGTCAACCAGCAACTGGAGCCCCTTTTT...CCCCTCAAAGCTCCTAGGAATCATTCTCGACAATCCTCCCTGCCCCGAAACAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CAA 90 bp TATGGGATTTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAGGCCGGGTTCTCCAGTTaGGCTTTCATCCACCATGAC +
Preference number: 5 (lower is better)
Translates to: YGISATLEAIMRPVVRTKAGFSS*AFIHHD
Trigger: GTCATGGTGGATGAAAGCCAAACTGGAGAACCCGGC...CTTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAAATCCCATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000399367.7
CDS-3UTR CAA 90 bp CTGCACCATGTGAAAGGAGAAGGACCTCTACACGACCACCAGCACAGCCTCCCGAAGGTTGTATTACAGTaGTTAAAGCCGCAGGTTTAT +
Preference number: 5 (lower is better)
Translates to: LHHVKGEGPLHDHQHSLPKVVLQ*LKPQVY
Trigger: ATAAACCTGCGGCTTTAACAACTGTAATACAACCTT...CGGGAGGCTGTGCTGGTGGTCGTGTAGAGGTCCTTCTCCTTTCACATGGTGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS GCA 90 bp GCTGCTGTTCCAGGAGAGCTTGCCTTCGTTTCTCCAGTTCCAGGTTaGCACGTTCAAAGTTCTCCCGCTTCTTATCTTCAAACGTTACTT +
Preference number: 5 (lower is better)
Translates to: AAVPGELAFVSPVPG*HVQSSPASYLQTLL
Trigger: AAGTAACGTTTGAAGATAAGAAGCGGGAGAACTTTGAACGTGGCAACCTGGAACTGGAGAAACGAAGGCAAGCTCTCCTGGAACAGCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379960.9
CDS CCA 90 bp TCTAAAAGAAGGTGGAATGTATTCTGGAGGCAGGACAGGTGGCAGTaGTTGGCCAGACATAGCTACATCAATGAGGTGCATTGCCAGGAT +
Preference number: 5 (lower is better)
Translates to: SKRRWNVFWRQDRWQ*LARHSYINEVHCQD
Trigger: ATCCTGGCAATGCACCTCATTGATGTAGCTATGTCTGGCCAACCACTGCCACCTGTCCTGCCTCCAGAATACATTCCACCTTCTTTTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000379960.9
ENST00000381283.7
ENST00000381285.8
ENST00000381291.8
ENST00000381318.8
ENST00000399338.8
ENST00000399349.5
ENST00000399352.5
ENST00000399353.5
ENST00000399355.6
ENST00000399367.7
ENST00000488166.1
CDS-3UTR CAA 90 bp CACCATGTGAAAGGAGAAGGACCTCTACACGACCACCAGCACAGCCTCCCGACATATGGAAAACTCCACTaGATCCATTCTTCCATCATT +
Preference number: 5 (lower is better)
Translates to: HHVKGEGPLHDHQHSLPTYGKLH*IHSSII
Trigger: AATGATGGAAGAATGGATCAAGTGGAGTTTTCCATA...TGTCGGGAGGCTGTGCTGGTGGTCGTGTAGAGGTCCTTCTCCTTTCACATGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CAA 90 bp ACCGACAGGGTTTCAACTCGATGCCTTCAACCACGTTCACCATCAACCTTCCAAAGAAATAGCAACTGGTaGCTGTTTCATGACAGGGGG +
Preference number: 5 (lower is better)
Translates to: TDRVSTRCLQPRSPSTFQRNSNW*LFHDRG
Trigger: CCCCCTGTCATGAAACAGCAACCAGTTGCTATTTCT...TTGGAAGGTTGATGGTGAACGTGGTTGAAGGCATCGAGTTGAAACCCTGTCGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381285.8
CDS-3UTR CAA 90 bp GCTTTGAGGGGCCTGTCTTTGCCATCCCATATCCCTGTGACTGAATACCAAATGCAGAAAGATTCCATATaGAAGCCAGCTGAGCCTGTG +
Preference number: 5 (lower is better)
Translates to: ALRGLSLPSHIPVTEYQMQKDSI*KPAEPV
Trigger: CACAGGCTCAGCTGGCTTCAATATGGAATCTTTCTG...CATTTGGTATTCAGTCACAGGGATATGGGATGGCAAAGACAGGCCCCTCAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CAA 90 bp GTTCAGCCTCCATGGACTTTTGCTTCTGGAGTTGTTGCTTATTGTGTATTTCTCTTGTCTTTTGCGCTCTaGCTCCTGGCGCTCACGCTC +
Preference number: 5 (lower is better)
Translates to: VQPPWTFASGVVAYCVFLLSFAL*LLALTL
Trigger: GAGCGTGAGCGCCAGGAGCAAGAGCGCAAAAGACAA...GAGAAATACACAATAAGCAACAACTCCAGAAGCAAAAGTCCATGGAGGCTGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379960.9
CDS-3UTR CAA 90 bp AGACTGTGGATATCGTTGATCGTAACGACCTCAGTGGTGTTGTCTACTGATTTTTTGTCTTTTGCGCTCTaGCTCCTGGCGCTCACGCTC +
Preference number: 5 (lower is better)
Translates to: RLWISLIVTTSVVLSTDFLSFAL*LLALTL
Trigger: GAGCGTGAGCGCCAGGAGCAAGAGCGCAAAAGACAA...AAAATCAGTAGACAACACCACTGAGGTCGTTACGATCAACGATATCCACAGTCT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CAA 90 bp TTGTTTCATGAAACAGGAAATTGTTTCGGGGCAGGGAGGATTGTCGAGAATGATTTGTCTTTTGCGCTCTaGCTCCTGGCGCTCACGCTC +
Preference number: 5 (lower is better)
Translates to: LFHETGNCFGAGRIVENDLSFAL*LLALTL
Trigger: GAGCGTGAGCGCCAGGAGCAAGAGCGCAAAAGACAA...ATCATTCTCGACAATCCTCCCTGCCCCGAAACAATTTCCTGTTTCATGAAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CAA 90 bp GGGATTTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAGGAACCGTTCCCACTCAAGTaGTCGTTGCCTTTCAAGTTC +
Preference number: 5 (lower is better)
Translates to: GISATLEAIMRPVVRTKEPFPLK*SLPFKF
Trigger: GAACTTGAAAGGCAACGACAACTTGAGTGGGAACGG...TTCCTTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAAATCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CAA 90 bp CAGGATTCAGCACATTCAAGCACAGAACAGGTCACCAGCAACGACTGCTGCTATTGTGCTCTCAATTTCTaGCCTTTGGGTGGTCAATCG +
Preference number: 5 (lower is better)
Translates to: QDSAHSSTEQVTSNDCCYCALNF*PLGGQS
Trigger: CGATTGACCACCCAAAGGCAAGAAATTGAGAGCACA...ATAGCAGCAGTCGTTGCTGGTGACCTGTTCTGTGCTTGAATGTGCTGAATCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000381318.8
CDS-3UTR CAA 90 bp CACCATGTGAAAGGAGAAGGACCTCTACACGACCACCAGCACAGCCTCCCGACATTGCTTCTGGAGTTGTaGCTTATTGTGTATTTCTCT +
Preference number: 5 (lower is better)
Translates to: HHVKGEGPLHDHQHSLPTLLLEL*LIVYFS
Trigger: AGAGAAATACACAATAAGCAACAACTCCAGAAGCAA...TGTCGGGAGGCTGTGCTGGTGGTCGTGTAGAGGTCCTTCTCCTTTCACATGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CAA 90 bp CACCATGTGAAAGGAGAAGGACCTCTACACGACCACCAGCACAGCCTCCCGACACTTTTGCTTCTGGAGTaGTTGCTTATTGTGTATTTC +
Preference number: 5 (lower is better)
Translates to: HHVKGEGPLHDHQHSLPTLLLLE*LLIVYF
Trigger: GAAATACACAATAAGCAACAACTCCAGAAGCAAAAG...TGTCGGGAGGCTGTGCTGGTGGTCGTGTAGAGGTCCTTCTCCTTTCACATGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CAA 90 bp ACTGAAGTGCAACTGAACGAGGAGGAGAGGTCCTCGCTCTCTGCACCATGTGAATTCCTGAGCTCGTCTTaGGGCTTCTTCTTTTTGTTT +
Preference number: 5 (lower is better)
Translates to: TEVQLNEEERSSLSAPCEFLSSS*GFFFLF
Trigger: AAACAAAAAGAAGAAGCCCAAAGACGAGCTCAGGAA...TTCACATGGTGCAGAGAGCGAGGACCTCTCCTCCTCGTTCAGTTGCACTTCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CAA 90 bp TGTCCTACAACAATCAGGATTCAGCACATTCAAGCACAGAACAGGTCACCAGCAGGGCAGGGGCAGATGTaGAATCAGTCACTGGTTTCA +
Preference number: 5 (lower is better)
Translates to: CPTTIRIQHIQAQNRSPAGQGQM*NQSLVS
Trigger: TGAAACCAGTGACTGATTCAACATCTGCCCCTGCCC...TGCTGGTGACCTGTTCTGTGCTTGAATGTGCTGAATCCTGATTGTTGTAGGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000381318.8
CDS-3UTR CAA 90 bp CTATGGGATTTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAGGGCAGGGGCAGATGTaGAATCAGTCACTGGTTTCA +
Preference number: 5 (lower is better)
Translates to: LWDFSDPRSHNETCSEDKGQGQM*NQSLVS
Trigger: TGAAACCAGTGACTGATTCAACATCTGCCCCTGCCC...TTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAAATCCCATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CAA 90 bp CAGTTATCCGTTTCTGGTTTCTCATTCGTGCTGGTGGGCCACGTGGAGCTGAAGAAGTGGTTGTCTTTTTaGGCTCTCCAAGGATATAGG +
Preference number: 5 (lower is better)
Translates to: QLSVSGFSFVLVGHVELKKWLSF*ALQGYR
Trigger: CCTATATCCTTGGAGAGCCAAAAAAGACAACCACTT...CTTCAGCTCCACGTGGCCCACCAGCACGAATGAGAAACCAGAAACGGATAACTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379960.9
CDS-3UTR CAA 90 bp GGTGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGGCCGTGGGCAAACCACCACATGTCTaGCTGTTCCAGGACGGTGAT +
Preference number: 5 (lower is better)
Translates to: GGFLEKEYNFQTACVAVGKPPHV*LFQDGD
Trigger: ATCACCGTCCTGGAACAGCAAGACATGTGGTGGTTT...GCCCACGGCCACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CAA 90 bp GAAGGAACGGCTATAACGGTGCACATGCTGGAAACTTCCATAGACCAGCTCTTCTACTGCAGGTTTGATTaGGGGCTGAAGACTTTGTCG +
Preference number: 5 (lower is better)
Translates to: EGTAITVHMLETSIDQLFYCRFD*GLKTLS
Trigger: CGACAAAGTCTTCAGCCCCAAATCAAACCTGCAGTA...GAAGAGCTGGTCTATGGAAGTTTCCAGCATGTGCACCGTTATAGCCGTTCCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000381318.8
CDS-3UTR CAA 90 bp TATGGGATTTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAGCAGTTGGAATTCCACTaGGGGTTCAGAGTGTCCTGG +
Preference number: 5 (lower is better)
Translates to: YGISATLEAIMRPVVRTKQLEFH*GFRVSW
Trigger: CCAGGACACTCTGAACCCCAAGTGGAATTCCAACTG...CTTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAAATCCCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CAA 90 bp AAAAATCTCTGTGACCAGCTGCAGGTCATTCACATAGTTCTCCTCGGTGACAATTCGGGGCAGGGAGGATaGTCGAGAATGATTCCTAGG +
Preference number: 5 (lower is better)
Translates to: KNLCDQLQVIHIVLLGDNSGQGG*SRMIPR
Trigger: CCTAGGAATCATTCTCGACAATCCTCCCTGCCCCGA...ATTGTCACCGAGGAGAACTATGTGAATGACCTGCAGCTGGTCACAGAGATTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381285.8
CDS-3UTR CAA 90 bp TTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAGGAAAACACAAGGTTGGAAAAGGCTaGCTGTCCTCCCAGGAAAGG +
Preference number: 5 (lower is better)
Translates to: FSDPRSHNETCSEDKGKHKVGKG*LSSQER
Trigger: CCTTTCCTGGGAGGACAGCAAGCCTTTTCCAACCTT...GTGTTTTCCTTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CAA 90 bp TATGGGATTTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAGGGAACTGCAAACATTTaGGAGCGTCCAGCCCAGGAA +
Preference number: 5 (lower is better)
Translates to: YGISATLEAIMRPVVRTKGTANI*ERPAQE
Trigger: TTCCTGGGCTGGACGCTCCAAAATGTTTGCAGTTCC...CTTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAAATCCCATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CAA 90 bp CACCATGTGAAAGGAGAAGGACCTCTACACGACCACCAGCACAGCCTCCCGACAAAGGTTGTATTACAGTaGTTAAAGCCGCAGGTTTAT +
Preference number: 5 (lower is better)
Translates to: HHVKGEGPLHDHQHSLPTKVVLQ*LKPQVY
Trigger: ATAAACCTGCGGCTTTAACAACTGTAATACAACCTT...TGTCGGGAGGCTGTGCTGGTGGTCGTGTAGAGGTCCTTCTCCTTTCACATGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS GCA 90 bp CTCATTCACCACCCACCCCAGCACAGTAGCACCCAATGGCTAAAGTaGTACTTTGAAGTGACTAAAGGACTCAATAGCTTTTCTAGCTGC +
Preference number: 5 (lower is better)
Translates to: LIHHPPQHSSTQWLK*YFEVTKGLNSFSSC
Trigger: GCAGCTAGAAAAGCTATTGAGTCCTTTAGTCACTTCAAAGTAGCACTTTAGCCATTGGGTGCTACTGTGCTGGGGTGGGTGGTGAATGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000462212.5
ENST00000475422.5
ENST00000489261.1
CDS CCA 90 bp AACTCTTCTAAAAGAAGGTGGAATGTATTCTGGAGGCAGGACAGGTaGCAGTGGTTGGCCAGACATAGCTACATCAATGAGGTGCATTGC +
Preference number: 5 (lower is better)
Translates to: NSSKRRWNVFWRQDR*QWLARHSYINEVHC
Trigger: GCAATGCACCTCATTGATGTAGCTATGTCTGGCCAACCACTGCCACCTGTCCTGCCTCCAGAATACATTCCACCTTCTTTTAGAAGAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000379960.9
ENST00000381283.7
ENST00000381285.8
ENST00000381291.8
ENST00000381318.8
ENST00000399338.8
ENST00000399349.5
ENST00000399352.5
ENST00000399353.5
ENST00000399355.6
ENST00000399367.7
ENST00000488166.1
CDS CCA 90 bp GTCTTTCCTTTTAATTCTCCTCCAAGCCAGCCGGGTTCTCCAGTTTaGCTTTCATCCACCCATTCCCCTTTAACCATGACTATGTCTCCT +
Preference number: 5 (lower is better)
Translates to: VFPFNSPPSQPGSPV*LSSTHSPLTMTMSP
Trigger: AGGAGACATAGTCATGGTTAAAGGGGAATGGGTGGATGAAAGCCAAACTGGAGAACCCGGCTGGCTTGGAGGAGAATTAAAAGGAAAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000381318.8
ENST00000399355.6
CDS CCA 90 bp CTCCAGTTTGGCTTTCATCCACCCATTCCCCATGACTATGTCTCCTaGCTGGATAGTGATTTCATCATGGCTTCTGGATTCAAAGGGGTA +
Preference number: 5 (lower is better)
Translates to: LQFGFHPPIPHDYVS*LDSDFIMASGFKGV
Trigger: TACCCCTTTGAATCCAGAAGCCATGATGAAATCACTATCCAGCCAGGAGACATAGTCATGGGGAATGGGTGGATGAAAGCCAAACTGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419241.1
CDS-3UTR CAA 90 bp GTCCTGGATCGTCTTGGTGATGTGGCACTGGGAACCCATGGTCACCTCACAGTATATGGAAAACTCCACTaGATCCATTCTTCCATCATT +
Preference number: 5 (lower is better)
Translates to: VLDRLGDVALGTHGHLTVYGKLH*IHSSII
Trigger: AATGATGGAAGAATGGATCAAGTGGAGTTTTCCATA...TACTGTGAGGTGACCATGGGTTCCCAGTGCCACATCACCAAGACGATCCAGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381285.8
CDS-3UTR CAA 90 bp CCAAATGGTGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGGCCAAATGCAGGCAGAGGTaGTATAACAGGGGGAGCCCC +
Preference number: 5 (lower is better)
Translates to: PNGGFLEKEYNFQTACVAKCRQR*YNRGSP
Trigger: GGGGCTCCCCCTGTTATACAACCTCTGCCTGCATTT...GGCCACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCACCATTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CAA 90 bp TTGTTTCATGAAACAGGAAATTGTTTCGGGGCAGGGAGGATTGTCGAGAATGATAAATGCAGGCAGAGGTaGTATAACAGGGGGAGCCCC +
Preference number: 5 (lower is better)
Translates to: LFHETGNCFGAGRIVENDKCRQR*YNRGSP
Trigger: GGGGCTCCCCCTGTTATACAACCTCTGCCTGCATTT...ATCATTCTCGACAATCCTCCCTGCCCCGAAACAATTTCCTGTTTCATGAAACAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CAA 90 bp TGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGGCCGTGGGCTGGCCTGTATTTCAGTCTaGATGACTGAGGAACAGCCC +
Preference number: 5 (lower is better)
Translates to: WFLRKGIQFPDSMCGRGLACISV*MTEEQP
Trigger: GGGCTGTTCCTCAGTCATCAAGACTGAAATACAGGC...CAGCCCACGGCCACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CAA 90 bp TTTCACTGGAGCGGGAACCTCATTTTCTGGGATTTTCTCTGCATAGTTTGCAGGTTCTCCAGTTCCAGGTaGCCACGTTCAAAGTTCTCC +
Preference number: 5 (lower is better)
Translates to: FHWSGNLIFWDFLCIVCRFSSSR*PRSKFS
Trigger: GGAGAACTTTGAACGTGGCAACCTGGAACTGGAGAA...CCTGCAAACTATGCAGAGAAAATCCCAGAAAATGAGGTTCCCGCTCCAGTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379960.9
CDS-3UTR CAA 90 bp TGTCCTACAACAATCAGGATTCAGCACATTCAAGCACAGAACAGGTCACCAGCATTCTCCAGTTCCAGGTaGCCACGTTCAAAGTTCTCC +
Preference number: 5 (lower is better)
Translates to: CPTTIRIQHIQAQNRSPAFSSSR*PRSKFS
Trigger: GGAGAACTTTGAACGTGGCAACCTGGAACTGGAGAA...TGCTGGTGACCTGTTCTGTGCTTGAATGTGCTGAATCCTGATTGTTGTAGGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000381318.8
CDS-3UTR CAA 90 bp AACAGGGCTTCAGCTACAGCATATCTAACACACAAACGGACCATGAGCTCCATTTTCTCCAGTTCCAGGTaGCCACGTTCAAAGTTCTCC +
Preference number: 5 (lower is better)
Translates to: NRASATAYLTHKRTMSSIFSSSR*PRSKFS
Trigger: GGAGAACTTTGAACGTGGCAACCTGGAACTGGAGAA...AATGGAGCTCATGGTCCGTTTGTGTGTTAGATATGCTGTAGCTGAAGCCCTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CAA 90 bp CTATGGGATTTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAATTCTCCAGTTCCAGGTaGCCACGTTCAAAGTTCTCC +
Preference number: 5 (lower is better)
Translates to: LWDFSDPRSHNETCSEDKFSSSR*PRSKFS
Trigger: GGAGAACTTTGAACGTGGCAACCTGGAACTGGAGAA...TTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAAATCCCATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CAA 90 bp ACCTTCGCTTTAATTGGGCTCATTCTATACGTCTTTAAAACAGAGATACTGAACAGGCGCTCCTGCTCCTaGCGCTGCTGTTCCAGGAGA +
Preference number: 5 (lower is better)
Translates to: TFALIGLILYVFKTEILNRRSCS*RCCSRR
Trigger: TCTCCTGGAACAGCAGCGCAAGGAGCAGGAGCGCCT...GTTCAGTATCTCTGTTTTAAAGACGTATAGAATGAGCCCAATTAAAGCGAAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CAA 90 bp TGCAATATGATTAGAGCATCGTACAAGGTAATAGCTTTGCCATGGAAAGAACTAAGGCGCTCCTGCTCCTaGCGCTGCTGTTCCAGGAGA +
Preference number: 5 (lower is better)
Translates to: CNMIRASYKVIALPWKELRRSCS*RCCSRR
Trigger: TCTCCTGGAACAGCAGCGCAAGGAGCAGGAGCGCCT...TAGTTCTTTCCATGGCAAAGCTATTACCTTGTACGATGCTCTAATCATATTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CAA 90 bp TGTTACCCGTTGCATAGGCTTCAGTATAAAACTAGAGAGTGGCATCCCTTTACAAGTTCCAGTTGTCTTTaGCGCTCTTGCTCCTGGCGC +
Preference number: 5 (lower is better)
Translates to: CYPLHRLQYKTREWHPFTSSSCL*RSCSWR
Trigger: GCGCCAGGAGCAAGAGCGCAAAAGACAACTGGAACT...TGTAAAGGGATGCCACTCTCTAGTTTTATACTGAAGCCTATGCAACGGGTAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381285.8
CDS-3UTR CAA 90 bp GATGTTGAATCAGTCACTGGTTTCACTGGAGCGGGAACCTCATTTTCTGGGATTCTTCTCCAGTTCCAGTaGTCTTTTGCGCTCTTGCTC +
Preference number: 5 (lower is better)
Translates to: DVESVTGFTGAGTSFSGILLQFQ*SFALLL
Trigger: GAGCAAGAGCGCAAAAGACAACTGGAACTGGAGAAG...AATCCCAGAAAATGAGGTTCCCGCTCCAGTGAAACCAGTGACTGATTCAACATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379960.9
CDS-3UTR CAA 90 bp AACAGGGCTTCAGCTACAGCATATCTAACACACAAACGGACCATGAGCTCCATTTTTCAAGTTCCCGTTTaGCAGCCTCTCGCCTCTCAA +
Preference number: 5 (lower is better)
Translates to: NRASATAYLTHKRTMSSIFQVPV*QPLASQ
Trigger: TTGAGAGGCGAGAGGCTGCAAAACGGGAACTTGAAA...AATGGAGCTCATGGTCCGTTTGTGTGTTAGATATGCTGTAGCTGAAGCCCTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CAA 90 bp TTTCACTGGAGCGGGAACCTCATTTTCTGGGATTTTCTCTGCATAGTTTGCAGGCCGTTCCCACTCAAGTaGTCGTTGCCTTTCAAGTTC +
Preference number: 5 (lower is better)
Translates to: FHWSGNLIFWDFLCIVCRPFPLK*SLPFKF
Trigger: GAACTTGAAAGGCAACGACAACTTGAGTGGGAACGG...CCTGCAAACTATGCAGAGAAAATCCCAGAAAATGAGGTTCCCGCTCCAGTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379960.9
CDS-3UTR CAA 90 bp TGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGGCCGTGGGCTGCCGTTCCCACTCAAGTaGTCGTTGCCTTTCAAGTTC +
Preference number: 5 (lower is better)
Translates to: WFLRKGIQFPDSMCGRGLPFPLK*SLPFKF
Trigger: GAACTTGAAAGGCAACGACAACTTGAGTGGGAACGG...CAGCCCACGGCCACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CAA 90 bp CGTAACTGGACCTTTGGAGCCCTGGTCTTTCTTGATGTCCGCCACACGGATCTCTTGCTTCTGGAGTTGTaGCTTATTGTGTATTTCTCT +
Preference number: 5 (lower is better)
Translates to: RNWTFGALVFLDVRHTDLLLLEL*LIVYFS
Trigger: AGAGAAATACACAATAAGCAACAACTCCAGAAGCAA...GAGATCCGTGTGGCGGACATCAAGAAAGACCAGGGCTCCAAAGGTCCAGTTACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381285.8
CDS-3UTR CAA 90 bp GGGATTTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAGGAAAGCCTCCATGGACTTTaGCTTCTGGAGTTGTTGCTT +
Preference number: 5 (lower is better)
Translates to: GISATLEAIMRPVVRTKESLHGL*LLELLL
Trigger: AAGCAACAACTCCAGAAGCAAAAGTCCATGGAGGCT...TTCCTTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAAATCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CAA 90 bp TATGGGATTTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAGCTTCGTGGAGTTTTCTaGGTCTCTGATGCTCGTCCT +
Preference number: 5 (lower is better)
Translates to: YGISATLEAIMRPVVRTKLRGVF*VSDARP
Trigger: AGGACGAGCATCAGAGACCAAGAAAACTCCACGAAG...CTTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAAATCCCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CAA 90 bp GTTTCACTGGAGCGGGAACCTCATTTTCTGGGATTTTCTCTGCATAGTTTGCAGTCTTGTGCTTCCTGTTaGCCTTTTTCCTCGCCATCC +
Preference number: 5 (lower is better)
Translates to: VSLEREPHFLGFSLHSLQSCASC*PFSSPS
Trigger: GGATGGCGAGGAAAAAGGCAAACAGGAAGCACAAGA...CTGCAAACTATGCAGAGAAAATCCCAGAAAATGAGGTTCCCGCTCCAGTGAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000379960.9
CDS-3UTR CAA 90 bp AACAGGGCTTCAGCTACAGCATATCTAACACACAAACGGACCATGAGCTCCATTTCTTGTGCTTCCTGTTaGCCTTTTTCCTCGCCATCC +
Preference number: 5 (lower is better)
Translates to: NRASATAYLTHKRTMSSISCASC*PFSSPS
Trigger: GGATGGCGAGGAAAAAGGCAAACAGGAAGCACAAGA...AATGGAGCTCATGGTCCGTTTGTGTGTTAGATATGCTGTAGCTGAAGCCCTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CAA 90 bp TGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGGCCGTGGGCTGTGGCTTAGCTGGTTCTaGGTGTTGATGGAAAAGCCG +
Preference number: 5 (lower is better)
Translates to: WFLRKGIQFPDSMCGRGLWLSWF*VLMEKP
Trigger: CGGCTTTTCCATCAACACCAAGAACCAGCTAAGCCA...CAGCCCACGGCCACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CAA 90 bp AGACTGTGGATATCGTTGATCGTAACGACCTCAGTGGTGTTGTCTACTGATTTTGCCGGGTTCTCCAGTTaGGCTTTCATCCACCCATTC +
Preference number: 5 (lower is better)
Translates to: RLWISLIVTTSVVLSTDFAGFSS*AFIHPF
Trigger: GAATGGGTGGATGAAAGCCAAACTGGAGAACCCGGC...AAAATCAGTAGACAACACCACTGAGGTCGTTACGATCAACGATATCCACAGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381291.8
CDS-3UTR CAA 90 bp TGGAGCGGGAACCTCATTTTCTGGGATTTTCTCTGCATAGTTTGCAGGGAACCATTTTCTCTGCATAGTTaGCAGGGAACCACCCTGTCT +
Preference number: 5 (lower is better)
Translates to: WSGNLIFWDFLCIVCREPFSLHS*QGTTLS
Trigger: AGACAGGGTGGTTCCCTGCAAACTATGCAGAGAAAA...TGGTTCCCTGCAAACTATGCAGAGAAAATCCCAGAAAATGAGGTTCCCGCTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379960.9
ENST00000419241.1
CDS-3UTR CAA 90 bp AACAGGGCTTCAGCTACAGCATATCTAACACACAAACGGACCATGAGCTCCATTAAACCACCACATGTCTaGCTGTTCCAGGACGGTGAT +
Preference number: 5 (lower is better)
Translates to: NRASATAYLTHKRTMSSIKPPHV*LFQDGD
Trigger: ATCACCGTCCTGGAACAGCAAGACATGTGGTGGTTT...AATGGAGCTCATGGTCCGTTTGTGTGTTAGATATGCTGTAGCTGAAGCCCTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CAA 90 bp TCACTGGTTTCACTGGAGCGGGAACCTCATTTTCTGGGATTTTCTCTGCATAGTCCAACCCTTCTGACCTaGAACTTCTCCAAACCACCA +
Preference number: 5 (lower is better)
Translates to: SLVSLEREPHFLGFSLHSPTLLT*NFSKPP
Trigger: TGGTGGTTTGGAGAAGTTCAAGGTCAGAAGGGTTGG...ACTATGCAGAGAAAATCCCAGAAAATGAGGTTCCCGCTCCAGTGAAACCAGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379960.9
CDS-3UTR CAA 90 bp ACCTTCGCTTTAATTGGGCTCATTCTATACGTCTTTAAAACAGAGATACTGAACCCCGAAACGACCGGCTaGGCTGCTGGAGAGGCTACT +
Preference number: 5 (lower is better)
Translates to: TFALIGLILYVFKTEILNPETTG*AAGEAT
Trigger: AGTAGCCTCTCCAGCAGCCAAGCCGGTCGTTTCGGG...GTTCAGTATCTCTGTTTTAAAGACGTATAGAATGAGCCCAATTAAAGCGAAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CAA 90 bp AGACTGTGGATATCGTTGATCGTAACGACCTCAGTGGTGTTGTCTACTGATTTTCTTTTTCCCACGTGCTaGCAGCTCTCCTTCCCACCA +
Preference number: 5 (lower is better)
Translates to: RLWISLIVTTSVVLSTDFLFPTC*QLSFPP
Trigger: TGGTGGGAAGGAGAGCTGCAAGCACGTGGGAAAAAG...AAAATCAGTAGACAACACCACTGAGGTCGTTACGATCAACGATATCCACAGTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CAA 90 bp TTGTTTCATGAAACAGGAAATTGTTTCGGGGCAGGGAGGATTGTCGAGAATGATCCACTGTGCAGAAATTaGCGCGGCCCCAAGCAATTG +
Preference number: 5 (lower is better)
Translates to: LFHETGNCFGAGRIVENDPLCRN*RGPKQL
Trigger: CAATTGCTTGGGGCCGCGCAAATTTCTGCACAGTGG...ATCATTCTCGACAATCCTCCCTGCCCCGAAACAATTTCCTGTTTCATGAAACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CAA 90 bp GGGATTTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAGGAATACTGCAGGTTTGATTaGGGGCTGAAGACTTTGTCG +
Preference number: 5 (lower is better)
Translates to: GISATLEAIMRPVVRTKEYCRFD*GLKTLS
Trigger: CGACAAAGTCTTCAGCCCCAAATCAAACCTGCAGTA...TTCCTTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAAATCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CAA 90 bp GTTCACCATCAACCTTCCAATGCCTGTTGCCCTTTGGGAACGGACCAGGTACGCTACCAAAAAGAGCTGTaGAAATGTCCTACAACAATC +
Preference number: 5 (lower is better)
Translates to: VHHQPSNACCPLGTDQVRYQKEL*KCPTTI
Trigger: GATTGTTGTAGGACATTTCAACAGCTCTTTTTGGTA...GCGTACCTGGTCCGTTCCCAAAGGGCAACAGGCATTGGAAGGTTGATGGTGAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381285.8
CDS-3UTR CAA 90 bp AAAAGGAATACAATTTCCAGACAGCATGTGTGGCCGTGGGCTGGGACCCTGCTGAGAAACCAGCTCTTTTaGTTACTGCAGTATTTCCAG +
Preference number: 5 (lower is better)
Translates to: KRNTISRQHVWPWAGTLLRNQLF*LLQYFQ
Trigger: CTGGAAATACTGCAGTAACAAAAAGAGCTGGTTTCT...CAGCAGGGTCCCAGCCCACGGCCACACATGCTGTCTGGAAATTGTATTCCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS CCA 90 bp AGTTTGGCTTTCATCCACCCATTCCCCATGACTATGTCTCCTGGCTaGATAGTGATTTCATCATGGCTTCTGGATTCAAAGGGGTACAGT +
Preference number: 5 (lower is better)
Translates to: SLAFIHPFPMTMSPG*IVISSWLLDSKGYS
Trigger: ACTGTACCCCTTTGAATCCAGAAGCCATGATGAAATCACTATCCAGCCAGGAGACATAGTCATGGGGAATGGGTGGATGAAAGCCAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419241.1
CDS-3UTR CAA 90 bp AGCCAAAAGAGATTTTTCCAACATGGCTGCCAACCGAGACCCAGTGACCCAACATCTGTTACTTTTACCTaGCTAATCGACGCCTCATCT +
Preference number: 5 (lower is better)
Translates to: SQKRFFQHGCQPRPSDPTSVTFT*LIDASS
Trigger: AGATGAGGCGTCGATTAGCAAGGTAAAAGTAACAGA...TGTTGGGTCACTGGGTCTCGGTTGGCAGCCATGTTGGAAAAATCTCTTTTGGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000381318.8
CDS-3UTR CAA 90 bp GCTTTGAGGGGCCTGTCTTTGCCATCCCATATCCCTGTGACTGAATACCAAATGTCTGTTACTTTTACCTaGCTAATCGACGCCTCATCT +
Preference number: 5 (lower is better)
Translates to: ALRGLSLPSHIPVTEYQMSVTFT*LIDASS
Trigger: AGATGAGGCGTCGATTAGCAAGGTAAAAGTAACAGA...CATTTGGTATTCAGTCACAGGGATATGGGATGGCAAAGACAGGCCCCTCAAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CAA 90 bp CAACCAGATAAATCTGAGACCGAACAAAAACACAGAGTGCTTTCTCATGTGGCTCTGTTCCAGGAGAGCTaGCCTTCGTTTCTCCAGTTC +
Preference number: 5 (lower is better)
Translates to: QPDKSETEQKHRVLSHVALFQES*PSFLQF
Trigger: GAACTGGAGAAACGAAGGCAAGCTCTCCTGGAACAG...AGCCACATGAGAAAGCACTCTGTGTTTTTGTTCGGTCTCAGATTTATCTGGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CAA 90 bp GGAATCAGAACTGAATCCACGCAACAATACACCAGTGTGTTTTCATTGACATATTTGTCTTTTGCGCTCTaGCTCCTGGCGCTCACGCTC +
Preference number: 5 (lower is better)
Translates to: GIRTESTQQYTSVFSLTYLSFAL*LLALTL
Trigger: GAGCGTGAGCGCCAGGAGCAAGAGCGCAAAAGACAA...ATATGTCAATGAAAACACACTGGTGTATTGTTGCGTGGATTCAGTTCTGATTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000381318.8
CDS-3UTR CAA 90 bp GTTTCACTGGAGCGGGAACCTCATTTTCTGGGATTTTCTCTGCATAGTTTGCAGCCACTCAAGTTGTCGTaGCCTTTCAAGTTCCCGTTT +
Preference number: 5 (lower is better)
Translates to: VSLEREPHFLGFSLHSLQPLKLS*PFKFPF
Trigger: AAACGGGAACTTGAAAGGCAACGACAACTTGAGTGG...CTGCAAACTATGCAGAGAAAATCCCAGAAAATGAGGTTCCCGCTCCAGTGAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379960.9
CDS-3UTR CAA 90 bp GGTGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGGCCGTGGGCCTCAATTTCTTGCCTTaGGGTGGTCAATCGACATCT +
Preference number: 5 (lower is better)
Translates to: GGFLEKEYNFQTACVAVGLNFLP*GGQSTS
Trigger: AGATGTCGATTGACCACCCAAAGGCAAGAAATTGAG...GCCCACGGCCACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CAA 90 bp TCCACCATGACTATGTCTCCTGGCTGGATAGTGATTTCATCATGGCTTCTGGATTGTGCTCTCAATTTCTaGCCTTTGGGTGGTCAATCG +
Preference number: 5 (lower is better)
Translates to: STMTMSPGWIVISSWLLDCALNF*PLGGQS
Trigger: CGATTGACCACCCAAAGGCAAGAAATTGAGAGCACA...ATCCAGAAGCCATGATGAAATCACTATCCAGCCAGGAGACATAGTCATGGTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379960.9
CDS-3UTR CAA 90 bp GAGAGAGGGCTGGGCTGCCCATGCATCCCAGTTATCCGTTTCTGGTTTCTCATTTTGCTTCTGGAGTTGTaGCTTATTGTGTATTTCTCT +
Preference number: 5 (lower is better)
Translates to: ERGLGCPCIPVIRFWFLILLLEL*LIVYFS
Trigger: AGAGAAATACACAATAAGCAACAACTCCAGAAGCAA...AATGAGAAACCAGAAACGGATAACTGGGATGCATGGGCAGCCCAGCCCTCTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379960.9
CDS-3UTR CAA 90 bp TGGGCTGCCCATGCATCCCAGTTATCCGTTTCTGGTTTCTCATTCGTGCTGGTGCTTTTGCTTCTGGAGTaGTTGCTTATTGTGTATTTC +
Preference number: 5 (lower is better)
Translates to: WAAHASQLSVSGFSFVLVLLLLE*LLIVYF
Trigger: GAAATACACAATAAGCAACAACTCCAGAAGCAAAAG...CACCAGCACGAATGAGAAACCAGAAACGGATAACTGGGATGCATGGGCAGCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379960.9
CDS-3UTR CAA 90 bp ACTGAAGTGCAACTGAACGAGGAGGAGAGGTCCTCGCTCTCTGCACCATGTGAACTTTTGCTTCTGGAGTaGTTGCTTATTGTGTATTTC +
Preference number: 5 (lower is better)
Translates to: TEVQLNEEERSSLSAPCELLLLE*LLIVYF
Trigger: GAAATACACAATAAGCAACAACTCCAGAAGCAAAAG...TTCACATGGTGCAGAGAGCGAGGACCTCTCCTCCTCGTTCAGTTGCACTTCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CAA 90 bp AAAAGGAATACAATTTCCAGACAGCATGTGTGGCCGTGGGCTGGGACCCTGCTGCTTTTGCTTCTGGAGTaGTTGCTTATTGTGTATTTC +
Preference number: 5 (lower is better)
Translates to: KRNTISRQHVWPWAGTLLLLLLE*LLIVYF
Trigger: GAAATACACAATAAGCAACAACTCCAGAAGCAAAAG...CAGCAGGGTCCCAGCCCACGGCCACACATGCTGTCTGGAAATTGTATTCCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CAA 90 bp TGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGGCCGTGGGCTGAGCCTCCATGGACTTTaGCTTCTGGAGTTGTTGCTT +
Preference number: 5 (lower is better)
Translates to: WFLRKGIQFPDSMCGRGLSLHGL*LLELLL
Trigger: AAGCAACAACTCCAGAAGCAAAAGTCCATGGAGGCT...CAGCCCACGGCCACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CAA 90 bp TTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAGGAAAACACAGCCTCCATGGACTTTaGCTTCTGGAGTTGTTGCTT +
Preference number: 5 (lower is better)
Translates to: FSDPRSHNETCSEDKGKHSLHGL*LLELLL
Trigger: AAGCAACAACTCCAGAAGCAAAAGTCCATGGAGGCT...GTGTTTTCCTTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CAA 90 bp AGAGCTTGCCTTCGTTTCTCCAGTTCCAGGTTGCCACGTTCAAAGTTCTCCCGCTATGATCTTTCGTTCTaGTTCTTTCTGTTTCAGTCG +
Preference number: 5 (lower is better)
Translates to: RACLRFSSSRLPRSKFSRYDLSF*FFLFQS
Trigger: CGACTGAAACAGAAAGAACAAGAACGAAAGATCATA...GCGGGAGAACTTTGAACGTGGCAACCTGGAACTGGAGAAACGAAGGCAAGCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379960.9
CDS-3UTR CAA 90 bp ACTGAAGTGCAACTGAACGAGGAGGAGAGGTCCTCGCTCTCTGCACCATGTGAATATGATCTTTCGTTCTaGTTCTTTCTGTTTCAGTCG +
Preference number: 5 (lower is better)
Translates to: TEVQLNEEERSSLSAPCEYDLSF*FFLFQS
Trigger: CGACTGAAACAGAAAGAACAAGAACGAAAGATCATA...TTCACATGGTGCAGAGAGCGAGGACCTCTCCTCCTCGTTCAGTTGCACTTCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CAA 90 bp TTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAGGAAAACACTTTTCTCTGCATAGTTaGCAGGGAACCACCCTGTCT +
Preference number: 5 (lower is better)
Translates to: FSDPRSHNETCSEDKGKHFSLHS*QGTTLS
Trigger: AGACAGGGTGGTTCCCTGCAAACTATGCAGAGAAAA...GTGTTTTCCTTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CAA 90 bp AGACTGTGGATATCGTTGATCGTAACGACCTCAGTGGTGTTGTCTACTGATTTTGGGCAGGGGCAGATGTaGAATCAGTCACTGGTTTCA +
Preference number: 5 (lower is better)
Translates to: RLWISLIVTTSVVLSTDFGQGQM*NQSLVS
Trigger: TGAAACCAGTGACTGATTCAACATCTGCCCCTGCCC...AAAATCAGTAGACAACACCACTGAGGTCGTTACGATCAACGATATCCACAGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CAA 90 bp CCAAATGGTGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGGCCGGGCAGGGGCAGATGTaGAATCAGTCACTGGTTTCA +
Preference number: 5 (lower is better)
Translates to: PNGGFLEKEYNFQTACVAGQGQM*NQSLVS
Trigger: TGAAACCAGTGACTGATTCAACATCTGCCCCTGCCC...GGCCACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCACCATTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CAA 90 bp ACCTTCGCTTTAATTGGGCTCATTCTATACGTCTTTAAAACAGAGATACTGAACTCACGCAAGGCCAGTTaGGGGGCAGGGGCAGATGTT +
Preference number: 5 (lower is better)
Translates to: TFALIGLILYVFKTEILNSRKAS*GAGADV
Trigger: AACATCTGCCCCTGCCCCCAAACTGGCCTTGCGTGA...GTTCAGTATCTCTGTTTTAAAGACGTATAGAATGAGCCCAATTAAAGCGAAGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CAA 90 bp ATCCCTGAATATCAGGTGCAAATCATGGCAGGGCAAATTTCTTTCTTTTTATTTCCCGAAACGACCGGCTaGGCTGCTGGAGAGGCTACT +
Preference number: 5 (lower is better)
Translates to: IPEYQVQIMAGQISFFLFPETTG*AAGEAT
Trigger: AGTAGCCTCTCCAGCAGCCAAGCCGGTCGTTTCGGG...AAATAAAAAGAAAGAAATTTGCCCTGCCATGATTTGCACCTGATATTCAGGGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437126.5
CDS-3UTR CAA 90 bp CCAAATGGTGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGGCCCAGTCAGGGTCCTCCTaGTTGAGGACGTTGATGATC +
Preference number: 5 (lower is better)
Translates to: PNGGFLEKEYNFQTACVAQSGSS*LRTLMI
Trigger: GATCATCAACGTCCTCAACAAGGAGGACCCTGACTG...GGCCACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCACCATTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CAA 90 bp GATAAATCTGAGACCGAACAAAAACACAGAGTGCTTTCTCATGTGGCTACAAGGCAGTCAGGGTCCTCCTaGTTGAGGACGTTGATGATC +
Preference number: 5 (lower is better)
Translates to: DKSETEQKHRVLSHVATRQSGSS*LRTLMI
Trigger: GATCATCAACGTCCTCAACAAGGAGGACCCTGACTG...CCTTGTAGCCACATGAGAAAGCACTCTGTGTTTTTGTTCGGTCTCAGATTTATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CAA 90 bp CTTATGGTGGCTCAGACTATACTGTCTGAGGGCTTCATCATGCTACCGGTTTCTGTCGCTTTCTTTCAGTaGGGGTCAACATATCCAAGA +
Preference number: 5 (lower is better)
Translates to: LMVAQTILSEGFIMLPVSVAFFQ*GSTYPR
Trigger: TCTTGGATATGTTGACCCCAACTGAAAGAAAGCGAC...AGAAACCGGTAGCATGATGAAGCCCTCAGACAGTATAGTCTGAGCCACCATAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CAA 90 bp CTTCTAGAACTTGAGGCTACTTACACAGAGGGATCTTTTCTCTCCTACCATCCCCTCGTGGATGTATCCTaGTCGCTTTCTTTCAGTTGG +
Preference number: 5 (lower is better)
Translates to: LLELEATYTEGSFLSYHPLVDVS*SLSFSW
Trigger: CCAACTGAAAGAAAGCGACAAGGATACATCCACGAG...GGGATGGTAGGAGAGAAAAGATCCCTCTGTGTAAGTAGCCTCAAGTTCTAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CAA 90 bp CTATGGGATTTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAACTCGTGGATGTATCCTaGTCGCTTTCTTTCAGTTGG +
Preference number: 5 (lower is better)
Translates to: LWDFSDPRSHNETCSEDKLVDVS*SLSFSW
Trigger: CCAACTGAAAGAAAGCGACAAGGATACATCCACGAG...TTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAAATCCCATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CAA 90 bp GCTTTGAGGGGCCTGTCTTTGCCATCCCATATCCCTGTGACTGAATACCAAATGCAATTGGTCACTGAATaGAACACAAGTTGCTCAGAC +
Preference number: 5 (lower is better)
Translates to: ALRGLSLPSHIPVTEYQMQLVTE*NTSCSD
Trigger: GTCTGAGCAACTTGTGTTCAATTCAGTGACCAATTG...CATTTGGTATTCAGTCACAGGGATATGGGATGGCAAAGACAGGCCCCTCAAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CAA 90 bp TTGTTTCATGAAACAGGAAATTGTTTCGGGGCAGGGAGGATTGTCGAGAATGATCGCGGCCCCAAGCAATaGGTCACTGAATTGAACACA +
Preference number: 5 (lower is better)
Translates to: LFHETGNCFGAGRIVENDRGPKQ*VTELNT
Trigger: TGTGTTCAATTCAGTGACCAATTGCTTGGGGCCGCG...ATCATTCTCGACAATCCTCCCTGCCCCGAAACAATTTCCTGTTTCATGAAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CAA 90 bp GGAATCAGAACTGAATCCACGCAACAATACACCAGTGTGTTTTCATTGACATATTTGGGGCTGAAGACTTaGTCGGTGCCAGAAGACCCC +
Preference number: 5 (lower is better)
Translates to: GIRTESTQQYTSVFSLTYLGLKT*SVPEDP
Trigger: GGGGTCTTCTGGCACCGACAAAGTCTTCAGCCCCAA...ATATGTCAATGAAAACACACTGGTGTATTGTTGCGTGGATTCAGTTCTGATTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000381318.8
CDS-3UTR CAA 90 bp CCAAATGGTGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGGCCACCTCACAGTACGGGTaGCTCTTTCCATGTGACCGA +
Preference number: 5 (lower is better)
Translates to: PNGGFLEKEYNFQTACVATSQYG*LFPCDR
Trigger: TCGGTCACATGGAAAGAGCAACCCGTACTGTGAGGT...GGCCACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCACCATTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CAA 90 bp GCTTTGAGGGGCCTGTCTTTGCCATCCCATATCCCTGTGACTGAATACCAAATGCTCAAACCAAACAGCTaGGCACATAGTCATAAAGTC +
Preference number: 5 (lower is better)
Translates to: ALRGLSLPSHIPVTEYQMLKPNS*AHSHKV
Trigger: GACTTTATGACTATGTGCCAAGCTGTTTGGTTTGAG...CATTTGGTATTCAGTCACAGGGATATGGGATGGCAAAGACAGGCCCCTCAAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CAA 90 bp CAGGATTCAGCACATTCAAGCACAGAACAGGTCACCAGCAACGACTGCTGCTATAACGATTGTTTGTCATaGTGCATACCATACGCTACC +
Preference number: 5 (lower is better)
Translates to: QDSAHSSTEQVTSNDCCYNDCLS*CIPYAT
Trigger: GGTAGCGTATGGTATGCACAATGACAAACAATCGTT...ATAGCAGCAGTCGTTGCTGGTGACCTGTTCTGTGCTTGAATGTGCTGAATCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CAA 90 bp TTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAGGAAAACACACACTAATCCAGAACTaGCTACATGGCAGGAGCATC +
Preference number: 5 (lower is better)
Translates to: FSDPRSHNETCSEDKGKHTLIQN*LHGRSI
Trigger: GATGCTCCTGCCATGTAGCAAGTTCTGGATTAGTGT...GTGTTTTCCTTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CAA 90 bp GACAGACTCCTTGTTGGCAAGGAGCATTTAATTTCTATGAAATATAGCCCAGGTGAGAGGCCCAATGGTTaGAGACTCCATGCATCACCC +
Preference number: 5 (lower is better)
Translates to: DRLLVGKEHLISMKYSPGERPNG*RLHASP
Trigger: GGGTGATGCATGGAGTCTCAAACCATTGGGCCTCTC...ACCTGGGCTATATTTCATAGAAATTAAATGCTCCTTGCCAACAAGGAGTCTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CAA 90 bp GGGATTTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAGGAAAGCACATCGCTAACCTaGAAAAGGAAGGGAGAACTT +
Preference number: 5 (lower is better)
Translates to: GISATLEAIMRPVVRTKESTSLT*KRKGEL
Trigger: AAGTTCTCCCTTCCTTTTCAAGGTTAGCGATGTGCT...TTCCTTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAAATCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CAA 90 bp GGGATTTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAGGAAGAGATGGGGACCTACTaGCAAAAAGCAAATGGAACT +
Preference number: 5 (lower is better)
Translates to: GISATLEAIMRPVVRTKEEMGTY*QKANGT
Trigger: AGTTCCATTTGCTTTTTGCAAGTAGGTCCCCATCTC...TTCCTTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAAATCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CAA 90 bp GGTTCAAGATACACAGGAAGAGCAATTTGTACTGATGTTGCTACTGGTTTAAAGGCTGGACTCCTGGGGTaGCCCCCTCCTGAAATCATT +
Preference number: 5 (lower is better)
Translates to: GSRYTGRAICTDVATGLKAGLLG*PPPEII
Trigger: AATGATTTCAGGAGGGGGCAACCCCAGGAGTCCAGC...CTTTAAACCAGTAGCAACATCAGTACAAATTGCTCTTCCTGTGTATCTTGAACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CAA 90 bp CTATGGGATTTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAATGTCCCCAGACTTTTTaGAAACAACCAAGGCCCAAG +
Preference number: 5 (lower is better)
Translates to: LWDFSDPRSHNETCSEDKCPQTF*KQPRPK
Trigger: CTTGGGCCTTGGTTGTTTCAAAAAAGTCTGGGGACA...TTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAAATCCCATAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CAA 90 bp TTTATTGAGAGCTTCCAACTAGTGTTTAAAAGACAAACAGGGCTTCAGCTACAGAGGAGGACAGCTAGATaGTGCTTGAGGCTCCCCCTG +
Preference number: 5 (lower is better)
Translates to: FIESFQLVFKRQTGLQLQRRTAR*CLRLPL
Trigger: CAGGGGGAGCCTCAAGCACAATCTAGCTGTCCTCCT...CTGTAGCTGAAGCCCTGTTTGTCTTTTAAACACTAGTTGGAAGCTCTCAATAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS GCA 90 bp TTTAGTAGTTCTTGCCTTCGATTCCGTTCCCACTCAAGTTGTCGTTaGCTTTCAAGTTCCCGTTTTGCAGCCTGTGACATTTACAGAGAC +
Preference number: 5 (lower is better)
Translates to: FSSSCLRFRSHSSCR*LSSSRFAACDIYRD
Trigger: GTCTCTGTAAATGTCACAGGCTGCAAAACGGGAACTTGAAAGGCAACGACAACTTGAGTGGGAACGGAATCGAAGGCAAGAACTACTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474132.1
CDS GCA 90 bp CTTTTCACCCTTGTGTGGAATAACATAAAGGACCTCTCGTTATGTTaGGCTTTGTTATCAATTAGGGCAGACGTGAGCATGGCACCTCTC +
Preference number: 5 (lower is better)
Translates to: LFTLVWNNIKDLSLC*ALLSIRADVSMAPL
Trigger: GAGAGGTGCCATGCTCACGTCTGCCCTAATTGATAACAAAGCGCAACATAACGAGAGGTCCTTTATGTTATTCCACACAAGGGTGAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487427.5
CDS CCA 90 bp CTTTCATCCACCCATTCCCCTTTAACCATGACTATGTCTCCTGGCTaGATAGTGATTTCATCATGGCTTCTGGATTCAAAGGGGTACAGT +
Preference number: 5 (lower is better)
Translates to: LSSTHSPLTMTMSPG*IVISSWLLDSKGYS
Trigger: ACTGTACCCCTTTGAATCCAGAAGCCATGATGAAATCACTATCCAGCCAGGAGACATAGTCATGGTTAAAGGGGAATGGGTGGATGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000381318.8
ENST00000399355.6
CDS CCA 90 bp TTGGCTTTCATCCACCCATTCCCCTTTAACCATGACTATGTCTCCTaGCTGGATAGTGATTTCATCATGGCTTCTGGATTCAAAGGGGTA +
Preference number: 5 (lower is better)
Translates to: LAFIHPFPFNHDYVS*LDSDFIMASGFKGV
Trigger: TACCCCTTTGAATCCAGAAGCCATGATGAAATCACTATCCAGCCAGGAGACATAGTCATGGTTAAAGGGGAATGGGTGGATGAAAGCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000381318.8
ENST00000399355.6
CDS CCA 90 bp GGCTGGATGCTTCACTGTTTCCCAACAATTGTTTATTTCCAAAAGTaGAGGCCAAAGCCTTCCAGCCTCTTCACAAAGTCATTGTCTGAC +
Preference number: 5 (lower is better)
Translates to: GWMLHCFPTIVYFQK*RPKPSSLFTKSLSD
Trigger: GTCAGACAATGACTTTGTGAAGAGGCTGGAAGGCTTTGGCCTCCACTTTTGGAAATAAACAATTGTTGGGAAACAGTGAAGCATCCAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487427.5
CDS-3UTR CAA 90 bp CAACCAGATAAATCTGAGACCGAACAAAAACACAGAGTGCTTTCTCATGTGGCTTGCCACCAAAAGGTGTaGGAAACTGAGCCATGGTTC +
Preference number: 5 (lower is better)
Translates to: QPDKSETEQKHRVLSHVACHQKV*ETEPWF
Trigger: GAACCATGGCTCAGTTTCCAACACCTTTTGGTGGCA...AGCCACATGAGAAAGCACTCTGTGTTTTTGTTCGGTCTCAGATTTATCTGGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CAA 90 bp CCAAATGGTGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGGCCTGCCACCAAAAGGTGTaGGAAACTGAGCCATGGTTC +
Preference number: 5 (lower is better)
Translates to: PNGGFLEKEYNFQTACVACHQKV*ETEPWF
Trigger: GAACCATGGCTCAGTTTCCAACACCTTTTGGTGGCA...GGCCACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCACCATTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CAA 90 bp TTTATTGAGAGCTTCCAACTAGTGTTTAAAAGACAAACAGGGCTTCAGCTACAGCTGGAATGGATCCCATaGGCACTGGAGCAACAGCTG +
Preference number: 5 (lower is better)
Translates to: FIESFQLVFKRQTGLQLQLEWIP*ALEQQL
Trigger: CAGCTGTTGCTCCAGTGCCAATGGGATCCATTCCAG...CTGTAGCTGAAGCCCTGTTTGTCTTTTAAACACTAGTTGGAAGCTCTCAATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CAA 90 bp TGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGGCCGTGGGCTGCAGAAGATACTAGGGTaGGAGACATTCCAACAACTG +
Preference number: 5 (lower is better)
Translates to: WFLRKGIQFPDSMCGRGLQKILG*ETFQQL
Trigger: CAGTTGTTGGAATGTCTCCAACCCTAGTATCTTCTG...CAGCCCACGGCCACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CAA 90 bp TATGGGATTTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAGCAGAAGATACTAGGGTaGGAGACATTCCAACAACTG +
Preference number: 5 (lower is better)
Translates to: YGISATLEAIMRPVVRTKQKILG*ETFQQL
Trigger: CAGTTGTTGGAATGTCTCCAACCCTAGTATCTTCTG...CTTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAAATCCCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CAA 90 bp CCAAATGGTGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGGCCGCCTGTATTTCAGTCTaGATGACTGAGGAACAGCCC +
Preference number: 5 (lower is better)
Translates to: PNGGFLEKEYNFQTACVAACISV*MTEEQP
Trigger: GGGCTGTTCCTCAGTCATCAAGACTGAAATACAGGC...GGCCACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCACCATTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CAA 90 bp GATAAATCTGAGACCGAACAAAAACACAGAGTGCTTTCTCATGTGGCTACAAGGTTCTCCAGTTCCAGGTaGCCACGTTCAAAGTTCTCC +
Preference number: 5 (lower is better)
Translates to: DKSETEQKHRVLSHVATRFSSSR*PRSKFS
Trigger: GGAGAACTTTGAACGTGGCAACCTGGAACTGGAGAA...CCTTGTAGCCACATGAGAAAGCACTCTGTGTTTTTGTTCGGTCTCAGATTTATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CAA 90 bp GATAAATCTGAGACCGAACAAAAACACAGAGTGCTTTCTCATGTGGCTACAAGGCTTCTCCAGTTCCAGTaGTCTTTTGCGCTCTTGCTC +
Preference number: 5 (lower is better)
Translates to: DKSETEQKHRVLSHVATRLLQFQ*SFALLL
Trigger: GAGCAAGAGCGCAAAAGACAACTGGAACTGGAGAAG...CCTTGTAGCCACATGAGAAAGCACTCTGTGTTTTTGTTCGGTCTCAGATTTATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CAA 90 bp GATAAATCTGAGACCGAACAAAAACACAGAGTGCTTTCTCATGTGGCTACAAGGTTTCAAGTTCCCGTTTaGCAGCCTCTCGCCTCTCAA +
Preference number: 5 (lower is better)
Translates to: DKSETEQKHRVLSHVATRFQVPV*QPLASQ
Trigger: TTGAGAGGCGAGAGGCTGCAAAACGGGAACTTGAAA...CCTTGTAGCCACATGAGAAAGCACTCTGTGTTTTTGTTCGGTCTCAGATTTATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CAA 90 bp GATAAATCTGAGACCGAACAAAAACACAGAGTGCTTTCTCATGTGGCTACAAGGCCGTTCCCACTCAAGTaGTCGTTGCCTTTCAAGTTC +
Preference number: 5 (lower is better)
Translates to: DKSETEQKHRVLSHVATRPFPLK*SLPFKF
Trigger: GAACTTGAAAGGCAACGACAACTTGAGTGGGAACGG...CCTTGTAGCCACATGAGAAAGCACTCTGTGTTTTTGTTCGGTCTCAGATTTATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CAA 90 bp CCAAATGGTGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGGCCCCGTTCCCACTCAAGTaGTCGTTGCCTTTCAAGTTC +
Preference number: 5 (lower is better)
Translates to: PNGGFLEKEYNFQTACVAPFPLK*SLPFKF
Trigger: GAACTTGAAAGGCAACGACAACTTGAGTGGGAACGG...GGCCACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCACCATTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CAA 90 bp TCACTGGTTTCACTGGAGCGGGAACCTCATTTTCTGGGATTTTCTCTGCATAGTCTCAATTTCTTGCCTTaGGGTGGTCAATCGACATCT +
Preference number: 5 (lower is better)
Translates to: SLVSLEREPHFLGFSLHSLNFLP*GGQSTS
Trigger: AGATGTCGATTGACCACCCAAAGGCAAGAAATTGAG...ACTATGCAGAGAAAATCCCAGAAAATGAGGTTCCCGCTCCAGTGAAACCAGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379960.9
CDS-3UTR CAA 90 bp TTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAGGAAAACACCTCAATTTCTTGCCTTaGGGTGGTCAATCGACATCT +
Preference number: 5 (lower is better)
Translates to: FSDPRSHNETCSEDKGKHLNFLP*GGQSTS
Trigger: AGATGTCGATTGACCACCCAAAGGCAAGAAATTGAG...GTGTTTTCCTTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CAA 90 bp ATTGTTTCGGGGCAGGGAGGATTGTCGAGAATGATTCCTAGGAGCTTTGAGGGGTTGCTTCTGGAGTTGTaGCTTATTGTGTATTTCTCT +
Preference number: 5 (lower is better)
Translates to: IVSGQGGLSRMIPRSFEGLLLEL*LIVYFS
Trigger: AGAGAAATACACAATAAGCAACAACTCCAGAAGCAA...CCCCTCAAAGCTCCTAGGAATCATTCTCGACAATCCTCCCTGCCCCGAAACAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CAA 90 bp GAAACTTCCATAGACCAGCTCTTCAAAGAGCTAAGCCAGGGCCTGATCAGACCGCTTTTGCTTCTGGAGTaGTTGCTTATTGTGTATTTC +
Preference number: 5 (lower is better)
Translates to: ETSIDQLFKELSQGLIRPLLLLE*LLIVYF
Trigger: GAAATACACAATAAGCAACAACTCCAGAAGCAAAAG...CGGTCTGATCAGGCCCTGGCTTAGCTCTTTGAAGAGCTGGTCTATGGAAGTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000381318.8
CDS-3UTR CAA 90 bp GGGATTTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAGGAATTCCTGAGCTCGTCTTaGGGCTTCTTCTTTTTGTTT +
Preference number: 5 (lower is better)
Translates to: GISATLEAIMRPVVRTKEFLSSS*GFFFLF
Trigger: AAACAAAAAGAAGAAGCCCAAAGACGAGCTCAGGAA...TTCCTTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAAATCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CAA 90 bp AGACTGTGGATATCGTTGATCGTAACGACCTCAGTGGTGTTGTCTACTGATTTTCTTCGTGGAGTTTTCTaGGTCTCTGATGCTCGTCCT +
Preference number: 5 (lower is better)
Translates to: RLWISLIVTTSVVLSTDFLRGVF*VSDARP
Trigger: AGGACGAGCATCAGAGACCAAGAAAACTCCACGAAG...AAAATCAGTAGACAACACCACTGAGGTCGTTACGATCAACGATATCCACAGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CAA 90 bp CAACCAGATAAATCTGAGACCGAACAAAAACACAGAGTGCTTTCTCATGTGGCTAAAAGCCGACCCAGCTaGTCTTGTGCTTCCTGTTTG +
Preference number: 5 (lower is better)
Translates to: QPDKSETEQKHRVLSHVAKSRPS*SCASCL
Trigger: CAAACAGGAAGCACAAGACAAGCTGGGTCGGCTTTT...AGCCACATGAGAAAGCACTCTGTGTTTTTGTTCGGTCTCAGATTTATCTGGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CAA 90 bp GATAAATCTGAGACCGAACAAAAACACAGAGTGCTTTCTCATGTGGCTACAAGGTGGCTTAGCTGGTTCTaGGTGTTGATGGAAAAGCCG +
Preference number: 5 (lower is better)
Translates to: DKSETEQKHRVLSHVATRWLSWF*VLMEKP
Trigger: CGGCTTTTCCATCAACACCAAGAACCAGCTAAGCCA...CCTTGTAGCCACATGAGAAAGCACTCTGTGTTTTTGTTCGGTCTCAGATTTATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CAA 90 bp TTACCATTTATTGTACATCTACATGCACTGCCCCATGAGATTACAGATGAAAAATCACGCAAGGCCAGTTaGGGGGCAGGGGCAGATGTT +
Preference number: 5 (lower is better)
Translates to: LPFIVHLHALPHEITDEKSRKAS*GAGADV
Trigger: AACATCTGCCCCTGCCCCCAAACTGGCCTTGCGTGA...TTTTTCATCTGTAATCTCATGGGGCAGTGCATGTAGATGTACAATAAATGGTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000440794.2
CDS-3UTR CAA 90 bp GATAAATCTGAGACCGAACAAAAACACAGAGTGCTTTCTCATGTGGCTACAAGGCCAACCCTTCTGACCTaGAACTTCTCCAAACCACCA +
Preference number: 5 (lower is better)
Translates to: DKSETEQKHRVLSHVATRPTLLT*NFSKPP
Trigger: TGGTGGTTTGGAGAAGTTCAAGGTCAGAAGGGTTGG...CCTTGTAGCCACATGAGAAAGCACTCTGTGTTTTTGTTCGGTCTCAGATTTATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CAA 90 bp TTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAGGAAAACACGTCGCTTTCTTTCAGTaGGGGTCAACATATCCAAGA +
Preference number: 5 (lower is better)
Translates to: FSDPRSHNETCSEDKGKHVAFFQ*GSTYPR
Trigger: TCTTGGATATGTTGACCCCAACTGAAAGAAAGCGAC...GTGTTTTCCTTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CAA 90 bp ATACCAAATGGTGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGTTGGGGCTGAAGACTTaGTCGGTGCCAGAAGACCCC +
Preference number: 5 (lower is better)
Translates to: IPNGGFLEKEYNFQTACVLGLKT*SVPEDP
Trigger: GGGGTCTTCTGGCACCGACAAAGTCTTCAGCCCCAA...CACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCACCATTTGGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CAA 90 bp GACAGACTCCTTGTTGGCAAGGAGCATTTAATTTCTATGAAATATAGCCCAGGTACCTCACAGTACGGGTaGCTCTTTCCATGTGACCGA +
Preference number: 5 (lower is better)
Translates to: DRLLVGKEHLISMKYSPGTSQYG*LFPCDR
Trigger: TCGGTCACATGGAAAGAGCAACCCGTACTGTGAGGT...ACCTGGGCTATATTTCATAGAAATTAAATGCTCCTTGCCAACAAGGAGTCTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CAA 90 bp GACAGACTCCTTGTTGGCAAGGAGCATTTAATTTCTATGAAATATAGCCCAGGTGCAGCTGTGGTTTCTTaGCACCCTCAGTCTTTCTGC +
Preference number: 5 (lower is better)
Translates to: DRLLVGKEHLISMKYSPGAAVVS*HPQSFC
Trigger: GCAGAAAGACTGAGGGTGCAAAGAAACCACAGCTGC...ACCTGGGCTATATTTCATAGAAATTAAATGCTCCTTGCCAACAAGGAGTCTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CAA 90 bp TATGGGATTTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAGACAGTTCAAAGATACTaGGGCTATTGGCCATGTAGG +
Preference number: 5 (lower is better)
Translates to: YGISATLEAIMRPVVRTKTVQRY*GYWPCR
Trigger: CCTACATGGCCAATAGCCCAAGTATCTTTGAACTGT...CTTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAAATCCCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CAA 90 bp TGCAATATGATTAGAGCATCGTACAAGGTAATAGCTTTGCCATGGAAAGAACTAAGGAGGACAGCTAGATaGTGCTTGAGGCTCCCCCTG +
Preference number: 5 (lower is better)
Translates to: CNMIRASYKVIALPWKELRRTAR*CLRLPL
Trigger: CAGGGGGAGCCTCAAGCACAATCTAGCTGTCCTCCT...TAGTTCTTTCCATGGCAAAGCTATTACCTTGTACGATGCTCTAATCATATTGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS GCA 90 bp AGGTGGCAGTGGTTGGCCAGACATAGCTACATCAATGAGGTGCATTaGCAGGATAAATTCCTCTGCTGTAAGTTTTCCATCTTGATCAAT +
Preference number: 5 (lower is better)
Translates to: RWQWLARHSYINEVH*QDKFLCCKFSILIN
Trigger: ATTGATCAAGATGGAAAACTTACAGCAGAGGAATTTATCCTGGCAATGCACCTCATTGATGTAGCTATGTCTGGCCAACCACTGCCACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000379960.9
ENST00000381283.7
ENST00000381285.8
ENST00000381291.8
ENST00000381318.8
ENST00000399338.8
ENST00000399349.5
ENST00000399352.5
ENST00000399353.5
ENST00000399355.6
ENST00000399367.7
ENST00000488166.1
CDS-3UTR CAA 90 bp AGCCAAAAGAGATTTTTCCAACATGGCTGCCAACCGAGACCCAGTGACCCAACATATGGAAAACTCCACTaGATCCATTCTTCCATCATT +
Preference number: 5 (lower is better)
Translates to: SQKRFFQHGCQPRPSDPTYGKLH*IHSSII
Trigger: AATGATGGAAGAATGGATCAAGTGGAGTTTTCCATA...TGTTGGGTCACTGGGTCTCGGTTGGCAGCCATGTTGGAAAAATCTCTTTTGGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000381318.8
CDS-3UTR CAA 90 bp GATAAATCTGAGACCGAACAAAAACACAGAGTGCTTTCTCATGTGGCTACAAGGAGAAATAGCAACTGGTaGCTGTTTCATGACAGGGGG +
Preference number: 5 (lower is better)
Translates to: DKSETEQKHRVLSHVATRRNSNW*LFHDRG
Trigger: CCCCCTGTCATGAAACAGCAACCAGTTGCTATTTCT...CCTTGTAGCCACATGAGAAAGCACTCTGTGTTTTTGTTCGGTCTCAGATTTATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CAA 90 bp TGCAATATGATTAGAGCATCGTACAAGGTAATAGCTTTGCCATGGAAAGAACTAAAATGCAGGCAGAGGTaGTATAACAGGGGGAGCCCC +
Preference number: 5 (lower is better)
Translates to: CNMIRASYKVIALPWKELKCRQR*YNRGSP
Trigger: GGGGCTCCCCCTGTTATACAACCTCTGCCTGCATTT...TAGTTCTTTCCATGGCAAAGCTATTACCTTGTACGATGCTCTAATCATATTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CAA 90 bp GATAAATCTGAGACCGAACAAAAACACAGAGTGCTTTCTCATGTGGCTACAAGGCAGAAAGATTCCATATaGAAGCCAGCTGAGCCTGTG +
Preference number: 5 (lower is better)
Translates to: DKSETEQKHRVLSHVATRQKDSI*KPAEPV
Trigger: CACAGGCTCAGCTGGCTTCAATATGGAATCTTTCTG...CCTTGTAGCCACATGAGAAAGCACTCTGTGTTTTTGTTCGGTCTCAGATTTATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CAA 90 bp AGACTGTGGATATCGTTGATCGTAACGACCTCAGTGGTGTTGTCTACTGATTTTCAGAAAGATTCCATATaGAAGCCAGCTGAGCCTGTG +
Preference number: 5 (lower is better)
Translates to: RLWISLIVTTSVVLSTDFQKDSI*KPAEPV
Trigger: CACAGGCTCAGCTGGCTTCAATATGGAATCTTTCTG...AAAATCAGTAGACAACACCACTGAGGTCGTTACGATCAACGATATCCACAGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CAA 90 bp CCAAATGGTGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGGCCCAGAAAGATTCCATATaGAAGCCAGCTGAGCCTGTG +
Preference number: 5 (lower is better)
Translates to: PNGGFLEKEYNFQTACVAQKDSI*KPAEPV
Trigger: CACAGGCTCAGCTGGCTTCAATATGGAATCTTTCTG...GGCCACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCACCATTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CAA 90 bp ACCTTCGCTTTAATTGGGCTCATTCTATACGTCTTTAAAACAGAGATACTGAACGACAGGTGGCAGTGGTaGGCCAGACATAGCTACATC +
Preference number: 5 (lower is better)
Translates to: TFALIGLILYVFKTEILNDRWQW*ARHSYI
Trigger: GATGTAGCTATGTCTGGCCAACCACTGCCACCTGTC...GTTCAGTATCTCTGTTTTAAAGACGTATAGAATGAGCCCAATTAAAGCGAAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CAA 90 bp ACCTTCGCTTTAATTGGGCTCATTCTATACGTCTTTAAAACAGAGATACTGAACAGTTCCAGTTGTCTTTaGCGCTCTTGCTCCTGGCGC +
Preference number: 5 (lower is better)
Translates to: TFALIGLILYVFKTEILNSSSCL*RSCSWR
Trigger: GCGCCAGGAGCAAGAGCGCAAAAGACAACTGGAACT...GTTCAGTATCTCTGTTTTAAAGACGTATAGAATGAGCCCAATTAAAGCGAAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CAA 90 bp TTTTTGAAAAATCTCTGTGACCAGCTGCAGGTCATTCACATAGTTCTCCTCGGTCCACTCAAGTTGTCGTaGCCTTTCAAGTTCCCGTTT +
Preference number: 5 (lower is better)
Translates to: FLKNLCDQLQVIHIVLLGPLKLS*PFKFPF
Trigger: AAACGGGAACTTGAAAGGCAACGACAACTTGAGTGG...ACCGAGGAGAACTATGTGAATGACCTGCAGCTGGTCACAGAGATTTTTCAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000381285.8
CDS-3UTR CAA 90 bp GATAAATCTGAGACCGAACAAAAACACAGAGTGCTTTCTCATGTGGCTACAAGGCCACTCAAGTTGTCGTaGCCTTTCAAGTTCCCGTTT +
Preference number: 5 (lower is better)
Translates to: DKSETEQKHRVLSHVATRPLKLS*PFKFPF
Trigger: AAACGGGAACTTGAAAGGCAACGACAACTTGAGTGG...CCTTGTAGCCACATGAGAAAGCACTCTGTGTTTTTGTTCGGTCTCAGATTTATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CAA 90 bp TTGTTTCATGAAACAGGAAATTGTTTCGGGGCAGGGAGGATTGTCGAGAATGATCCACTCAAGTTGTCGTaGCCTTTCAAGTTCCCGTTT +
Preference number: 5 (lower is better)
Translates to: LFHETGNCFGAGRIVENDPLKLS*PFKFPF
Trigger: AAACGGGAACTTGAAAGGCAACGACAACTTGAGTGG...ATCATTCTCGACAATCCTCCCTGCCCCGAAACAATTTCCTGTTTCATGAAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CAA 90 bp GATAAATCTGAGACCGAACAAAAACACAGAGTGCTTTCTCATGTGGCTACAAGGTGTGCTCTCAATTTCTaGCCTTTGGGTGGTCAATCG +
Preference number: 5 (lower is better)
Translates to: DKSETEQKHRVLSHVATRCALNF*PLGGQS
Trigger: CGATTGACCACCCAAAGGCAAGAAATTGAGAGCACA...CCTTGTAGCCACATGAGAAAGCACTCTGTGTTTTTGTTCGGTCTCAGATTTATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CAA 90 bp AGACTGTGGATATCGTTGATCGTAACGACCTCAGTGGTGTTGTCTACTGATTTTTGTGCTCTCAATTTCTaGCCTTTGGGTGGTCAATCG +
Preference number: 5 (lower is better)
Translates to: RLWISLIVTTSVVLSTDFCALNF*PLGGQS
Trigger: CGATTGACCACCCAAAGGCAAGAAATTGAGAGCACA...AAAATCAGTAGACAACACCACTGAGGTCGTTACGATCAACGATATCCACAGTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CAA 90 bp AGACTGTGGATATCGTTGATCGTAACGACCTCAGTGGTGTTGTCTACTGATTTTAGCCTCCATGGACTTTaGCTTCTGGAGTTGTTGCTT +
Preference number: 5 (lower is better)
Translates to: RLWISLIVTTSVVLSTDFSLHGL*LLELLL
Trigger: AAGCAACAACTCCAGAAGCAAAAGTCCATGGAGGCT...AAAATCAGTAGACAACACCACTGAGGTCGTTACGATCAACGATATCCACAGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CAA 90 bp CAACCAGATAAATCTGAGACCGAACAAAAACACAGAGTGCTTTCTCATGTGGCTAGCCTCCATGGACTTTaGCTTCTGGAGTTGTTGCTT +
Preference number: 5 (lower is better)
Translates to: QPDKSETEQKHRVLSHVASLHGL*LLELLL
Trigger: AAGCAACAACTCCAGAAGCAAAAGTCCATGGAGGCT...AGCCACATGAGAAAGCACTCTGTGTTTTTGTTCGGTCTCAGATTTATCTGGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CAA 90 bp CCAACTCAACCAGATAAATCTGAGACCGAACAAAAACACAGAGTGCTTTCTCATTGGCTTAGCTGGTTCTaGGTGTTGATGGAAAAGCCG +
Preference number: 5 (lower is better)
Translates to: PTQPDKSETEQKHRVLSHWLSWF*VLMEKP
Trigger: CGGCTTTTCCATCAACACCAAGAACCAGCTAAGCCA...ATGAGAAAGCACTCTGTGTTTTTGTTCGGTCTCAGATTTATCTGGTTGAGTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CAA 90 bp CCAACTCAACCAGATAAATCTGAGACCGAACAAAAACACAGAGTGCTTTCTCATCCAACCCTTCTGACCTaGAACTTCTCCAAACCACCA +
Preference number: 5 (lower is better)
Translates to: PTQPDKSETEQKHRVLSHPTLLT*NFSKPP
Trigger: TGGTGGTTTGGAGAAGTTCAAGGTCAGAAGGGTTGG...ATGAGAAAGCACTCTGTGTTTTTGTTCGGTCTCAGATTTATCTGGTTGAGTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CAA 90 bp ACCTTCGCTTTAATTGGGCTCATTCTATACGTCTTTAAAACAGAGATACTGAACCTTTTTCCCACGTGCTaGCAGCTCTCCTTCCCACCA +
Preference number: 5 (lower is better)
Translates to: TFALIGLILYVFKTEILNLFPTC*QLSFPP
Trigger: TGGTGGGAAGGAGAGCTGCAAGCACGTGGGAAAAAG...GTTCAGTATCTCTGTTTTAAAGACGTATAGAATGAGCCCAATTAAAGCGAAGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CAA 90 bp CTATGGGATTTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAATCCATTGCCAATCTTTaGACGAACTCCTTGAAGTCT +
Preference number: 5 (lower is better)
Translates to: LWDFSDPRSHNETCSEDKSIANL*TNSLKS
Trigger: AGACTTCAAGGAGTTCGTCAAAAGATTGGCAATGGA...TTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAAATCCCATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CAA 90 bp TGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGGCCGTGGGCTGTCCATTGCCAATCTTTaGACGAACTCCTTGAAGTCT +
Preference number: 5 (lower is better)
Translates to: WFLRKGIQFPDSMCGRGLSIANL*TNSLKS
Trigger: AGACTTCAAGGAGTTCGTCAAAAGATTGGCAATGGA...CAGCCCACGGCCACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CAA 90 bp CTATGGGATTTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAACAATTGGTCACTGAATaGAACACAAGTTGCTCAGAC +
Preference number: 5 (lower is better)
Translates to: LWDFSDPRSHNETCSEDKQLVTE*NTSCSD
Trigger: GTCTGAGCAACTTGTGTTCAATTCAGTGACCAATTG...TTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAAATCCCATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CAA 90 bp ATACCAAATGGTGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGTTGAGGGGCCTGTCTTaGCCATCCCATATCCCTGTG +
Preference number: 5 (lower is better)
Translates to: IPNGGFLEKEYNFQTACVLRGLS*PSHIPV
Trigger: CACAGGGATATGGGATGGCAAAGACAGGCCCCTCAA...CACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCACCATTTGGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CAA 90 bp CAGGATTCAGCACATTCAAGCACAGAACAGGTCACCAGCAACGACTGCTGCTATTACCAAAAAGAGCTGTaGAAATGTCCTACAACAATC +
Preference number: 5 (lower is better)
Translates to: QDSAHSSTEQVTSNDCCYYQKEL*KCPTTI
Trigger: GATTGTTGTAGGACATTTCAACAGCTCTTTTTGGTA...ATAGCAGCAGTCGTTGCTGGTGACCTGTTCTGTGCTTGAATGTGCTGAATCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000381318.8
CDS-3UTR CAA 90 bp TATGGGATTTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAGGCTCAACAGAGTCACTaGAGGAAAAAGAGTCACATA +
Preference number: 5 (lower is better)
Translates to: YGISATLEAIMRPVVRTKAQQSH*RKKSHI
Trigger: TATGTGACTCTTTTTCCTCAAGTGACTCTGTTGAGC...CTTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAAATCCCATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CAA 90 bp AGACTGTGGATATCGTTGATCGTAACGACCTCAGTGGTGTTGTCTACTGATTTTAGACTGTGGATATCGTaGATCGTAACGACCTCAGTG +
Preference number: 5 (lower is better)
Translates to: RLWISLIVTTSVVLSTDFRLWIS*IVTTSV
Trigger: CACTGAGGTCGTTACGATCAACGATATCCACAGTCT...AAAATCAGTAGACAACACCACTGAGGTCGTTACGATCAACGATATCCACAGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CAA 90 bp GATAAATCTGAGACCGAACAAAAACACAGAGTGCTTTCTCATGTGGCTACAAGGAGACTGTGGATATCGTaGATCGTAACGACCTCAGTG +
Preference number: 5 (lower is better)
Translates to: DKSETEQKHRVLSHVATRRLWIS*IVTTSV
Trigger: CACTGAGGTCGTTACGATCAACGATATCCACAGTCT...CCTTGTAGCCACATGAGAAAGCACTCTGTGTTTTTGTTCGGTCTCAGATTTATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CAA 90 bp TTTATTGAGAGCTTCCAACTAGTGTTTAAAAGACAAACAGGGCTTCAGCTACAGTGCCACCAAAAGGTGTaGGAAACTGAGCCATGGTTC +
Preference number: 5 (lower is better)
Translates to: FIESFQLVFKRQTGLQLQCHQKV*ETEPWF
Trigger: GAACCATGGCTCAGTTTCCAACACCTTTTGGTGGCA...CTGTAGCTGAAGCCCTGTTTGTCTTTTAAACACTAGTTGGAAGCTCTCAATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CAA 90 bp GATAAATCTGAGACCGAACAAAAACACAGAGTGCTTTCTCATGTGGCTACAAGGCAGAAGATACTAGGGTaGGAGACATTCCAACAACTG +
Preference number: 5 (lower is better)
Translates to: DKSETEQKHRVLSHVATRQKILG*ETFQQL
Trigger: CAGTTGTTGGAATGTCTCCAACCCTAGTATCTTCTG...CCTTGTAGCCACATGAGAAAGCACTCTGTGTTTTTGTTCGGTCTCAGATTTATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CAA 90 bp TGCAATATGATTAGAGCATCGTACAAGGTAATAGCTTTGCCATGGAAAGAACTACTGTTCCAGGAGAGCTaGCCTTCGTTTCTCCAGTTC +
Preference number: 5 (lower is better)
Translates to: CNMIRASYKVIALPWKELLFQES*PSFLQF
Trigger: GAACTGGAGAAACGAAGGCAAGCTCTCCTGGAACAG...TAGTTCTTTCCATGGCAAAGCTATTACCTTGTACGATGCTCTAATCATATTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CAA 90 bp CCAACTCAACCAGATAAATCTGAGACCGAACAAAAACACAGAGTGCTTTCTCATCCACTCAAGTTGTCGTaGCCTTTCAAGTTCCCGTTT +
Preference number: 5 (lower is better)
Translates to: PTQPDKSETEQKHRVLSHPLKLS*PFKFPF
Trigger: AAACGGGAACTTGAAAGGCAACGACAACTTGAGTGG...ATGAGAAAGCACTCTGTGTTTTTGTTCGGTCTCAGATTTATCTGGTTGAGTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CAA 90 bp AGACTGTGGATATCGTTGATCGTAACGACCTCAGTGGTGTTGTCTACTGATTTTCTCAATTTCTTGCCTTaGGGTGGTCAATCGACATCT +
Preference number: 5 (lower is better)
Translates to: RLWISLIVTTSVVLSTDFLNFLP*GGQSTS
Trigger: AGATGTCGATTGACCACCCAAAGGCAAGAAATTGAG...AAAATCAGTAGACAACACCACTGAGGTCGTTACGATCAACGATATCCACAGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CAA 90 bp GACAGACTCCTTGTTGGCAAGGAGCATTTAATTTCTATGAAATATAGCCCAGGTTGTGCTCTCAATTTCTaGCCTTTGGGTGGTCAATCG +
Preference number: 5 (lower is better)
Translates to: DRLLVGKEHLISMKYSPGCALNF*PLGGQS
Trigger: CGATTGACCACCCAAAGGCAAGAAATTGAGAGCACA...ACCTGGGCTATATTTCATAGAAATTAAATGCTCCTTGCCAACAAGGAGTCTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CAA 90 bp CCAACTCAACCAGATAAATCTGAGACCGAACAAAAACACAGAGTGCTTTCTCATAGCCTCCATGGACTTTaGCTTCTGGAGTTGTTGCTT +
Preference number: 5 (lower is better)
Translates to: PTQPDKSETEQKHRVLSHSLHGL*LLELLL
Trigger: AAGCAACAACTCCAGAAGCAAAAGTCCATGGAGGCT...ATGAGAAAGCACTCTGTGTTTTTGTTCGGTCTCAGATTTATCTGGTTGAGTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CAA 90 bp GGGATTTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAGGAATATGATCTTTCGTTCTaGTTCTTTCTGTTTCAGTCG +
Preference number: 5 (lower is better)
Translates to: GISATLEAIMRPVVRTKEYDLSF*FFLFQS
Trigger: CGACTGAAACAGAAAGAACAAGAACGAAAGATCATA...TTCCTTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAAATCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CAA 90 bp TTCTGTTTCAGTCGTTCAGCCTCCATGGACTTTTGCTTCTGGAGTTGTTGCTTATTCCTGAGCTCGTCTTaGGGCTTCTTCTTTTTGTTT +
Preference number: 5 (lower is better)
Translates to: FCFSRSASMDFCFWSCCLFLSSS*GFFFLF
Trigger: AAACAAAAAGAAGAAGCCCAAAGACGAGCTCAGGAA...TAAGCAACAACTCCAGAAGCAAAAGTCCATGGAGGCTGAACGACTGAAACAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379960.9
CDS-3UTR CAA 90 bp TTACCATTTATTGTACATCTACATGCACTGCCCCATGAGATTACAGATGAAAAAGCCGGGTTCTCCAGTTaGGCTTTCATCCACCCATTC +
Preference number: 5 (lower is better)
Translates to: LPFIVHLHALPHEITDEKAGFSS*AFIHPF
Trigger: GAATGGGTGGATGAAAGCCAAACTGGAGAACCCGGC...TTTTTCATCTGTAATCTCATGGGGCAGTGCATGTAGATGTACAATAAATGGTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000440794.2
CDS-3UTR CAA 90 bp CATTGTAATTACCATTTATTGTACATCTACATGCACTGCCCCATGAGATTACAGGGGCAGGGGCAGATGTaGAATCAGTCACTGGTTTCA +
Preference number: 5 (lower is better)
Translates to: HCNYHLLYIYMHCPMRLQGQGQM*NQSLVS
Trigger: TGAAACCAGTGACTGATTCAACATCTGCCCCTGCCC...CTGTAATCTCATGGGGCAGTGCATGTAGATGTACAATAAATGGTAATTACAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000440794.2
CDS-3UTR CAA 90 bp ATCCCTGAATATCAGGTGCAAATCATGGCAGGGCAAATTTCTTTCTTTTTATTTCTTTTTCCCACGTGCTaGCAGCTCTCCTTCCCACCA +
Preference number: 5 (lower is better)
Translates to: IPEYQVQIMAGQISFFLFLFPTC*QLSFPP
Trigger: TGGTGGGAAGGAGAGCTGCAAGCACGTGGGAAAAAG...AAATAAAAAGAAAGAAATTTGCCCTGCCATGATTTGCACCTGATATTCAGGGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000437126.5
CDS-3UTR CAA 90 bp TATGGGATTTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAGGTATCTTGTTACCCGTaGCATAGGCTTCAGTATAAA +
Preference number: 5 (lower is better)
Translates to: YGISATLEAIMRPVVRTKVSCYP*HRLQYK
Trigger: TTTATACTGAAGCCTATGCAACGGGTAACAAGATAC...CTTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAAATCCCATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CAA 90 bp ATACCAAATGGTGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGCGCGGCCCCAAGCAATaGGTCACTGAATTGAACACA +
Preference number: 5 (lower is better)
Translates to: IPNGGFLEKEYNFQTACVRGPKQ*VTELNT
Trigger: TGTGTTCAATTCAGTGACCAATTGCTTGGGGCCGCG...CACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCACCATTTGGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CAA 90 bp GATAAATCTGAGACCGAACAAAAACACAGAGTGCTTTCTCATGTGGCTACAAGGACAACATATGATTCATaGCTGGCTTGGGTCCATGTC +
Preference number: 5 (lower is better)
Translates to: DKSETEQKHRVLSHVATRTTYDS*LAWVHV
Trigger: GACATGGACCCAAGCCAGCAATGAATCATATGTTGT...CCTTGTAGCCACATGAGAAAGCACTCTGTGTTTTTGTTCGGTCTCAGATTTATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CAA 90 bp AGACTGTGGATATCGTTGATCGTAACGACCTCAGTGGTGTTGTCTACTGATTTTCACATGCAGCATTCCTaGATAGTGGGTCTTTTTGCA +
Preference number: 5 (lower is better)
Translates to: RLWISLIVTTSVVLSTDFHMQHS*IVGLFA
Trigger: TGCAAAAAGACCCACTATCAAGGAATGCTGCATGTG...AAAATCAGTAGACAACACCACTGAGGTCGTTACGATCAACGATATCCACAGTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS TCA 90 bp TCACCAGTAATGAATCCAGATATTGGCTTTAAACTATGGAACTGCTaGTCATGCTTCGCTCTTTCCTCTACAGTTATGGCCCAGATATCC +
Preference number: 5 (lower is better)
Translates to: SPVMNPDIGFKLWNC*SCFALSSTVMAQIS
Trigger: GGATATCTGGGCCATAACTGTAGAGGAAAGAGCGAAGCATGATCAGCAGTTCCATAGTTTAAAGCCAATATCTGGATTCATTACTGGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000381283.7
ENST00000381285.8
ENST00000381291.8
ENST00000381318.8
ENST00000399338.8
ENST00000399349.5
ENST00000399352.5
ENST00000399353.5
ENST00000399355.6
ENST00000399367.7
ENST00000444491.5
ENST00000451686.5
CDS-3UTR CAA 90 bp GATAAATCTGAGACCGAACAAAAACACAGAGTGCTTTCTCATGTGGCTACAAGGTCTGTTACTTTTACCTaGCTAATCGACGCCTCATCT +
Preference number: 5 (lower is better)
Translates to: DKSETEQKHRVLSHVATRSVTFT*LIDASS
Trigger: AGATGAGGCGTCGATTAGCAAGGTAAAAGTAACAGA...CCTTGTAGCCACATGAGAAAGCACTCTGTGTTTTTGTTCGGTCTCAGATTTATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CAA 90 bp ATACCAAATGGTGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGTGCCACCAAAAGGTGTaGGAAACTGAGCCATGGTTC +
Preference number: 5 (lower is better)
Translates to: IPNGGFLEKEYNFQTACVCHQKV*ETEPWF
Trigger: GAACCATGGCTCAGTTTCCAACACCTTTTGGTGGCA...CACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCACCATTTGGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CAA 90 bp CCAACTCAACCAGATAAATCTGAGACCGAACAAAAACACAGAGTGCTTTCTCATCAGAAGATACTAGGGTaGGAGACATTCCAACAACTG +
Preference number: 5 (lower is better)
Translates to: PTQPDKSETEQKHRVLSHQKILG*ETFQQL
Trigger: CAGTTGTTGGAATGTCTCCAACCCTAGTATCTTCTG...ATGAGAAAGCACTCTGTGTTTTTGTTCGGTCTCAGATTTATCTGGTTGAGTTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CAA 90 bp ACCTTCGCTTTAATTGGGCTCATTCTATACGTCTTTAAAACAGAGATACTGAACGCCTGTATTTCAGTCTaGATGACTGAGGAACAGCCC +
Preference number: 5 (lower is better)
Translates to: TFALIGLILYVFKTEILNACISV*MTEEQP
Trigger: GGGCTGTTCCTCAGTCATCAAGACTGAAATACAGGC...GTTCAGTATCTCTGTTTTAAAGACGTATAGAATGAGCCCAATTAAAGCGAAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CAA 90 bp TTTATTGAGAGCTTCCAACTAGTGTTTAAAAGACAAACAGGGCTTCAGCTACAGCAGAAAGATTCCATATaGAAGCCAGCTGAGCCTGTG +
Preference number: 5 (lower is better)
Translates to: FIESFQLVFKRQTGLQLQQKDSI*KPAEPV
Trigger: CACAGGCTCAGCTGGCTTCAATATGGAATCTTTCTG...CTGTAGCTGAAGCCCTGTTTGTCTTTTAAACACTAGTTGGAAGCTCTCAATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CAA 90 bp TGCAATATGATTAGAGCATCGTACAAGGTAATAGCTTTGCCATGGAAAGAACTACTTCTCCAGTTCCAGTaGTCTTTTGCGCTCTTGCTC +
Preference number: 5 (lower is better)
Translates to: CNMIRASYKVIALPWKELLLQFQ*SFALLL
Trigger: GAGCAAGAGCGCAAAAGACAACTGGAACTGGAGAAG...TAGTTCTTTCCATGGCAAAGCTATTACCTTGTACGATGCTCTAATCATATTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CAA 90 bp ACCTTCGCTTTAATTGGGCTCATTCTATACGTCTTTAAAACAGAGATACTGAACCTTCTCCAGTTCCAGTaGTCTTTTGCGCTCTTGCTC +
Preference number: 5 (lower is better)
Translates to: TFALIGLILYVFKTEILNLLQFQ*SFALLL
Trigger: GAGCAAGAGCGCAAAAGACAACTGGAACTGGAGAAG...GTTCAGTATCTCTGTTTTAAAGACGTATAGAATGAGCCCAATTAAAGCGAAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CAA 90 bp GGAATCAGAACTGAATCCACGCAACAATACACCAGTGTGTTTTCATTGACATATCCACTCAAGTTGTCGTaGCCTTTCAAGTTCCCGTTT +
Preference number: 5 (lower is better)
Translates to: GIRTESTQQYTSVFSLTYPLKLS*PFKFPF
Trigger: AAACGGGAACTTGAAAGGCAACGACAACTTGAGTGG...ATATGTCAATGAAAACACACTGGTGTATTGTTGCGTGGATTCAGTTCTGATTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000381318.8
CDS-3UTR CAA 90 bp TTTATTGAGAGCTTCCAACTAGTGTTTAAAAGACAAACAGGGCTTCAGCTACAGCCACTCAAGTTGTCGTaGCCTTTCAAGTTCCCGTTT +
Preference number: 5 (lower is better)
Translates to: FIESFQLVFKRQTGLQLQPLKLS*PFKFPF
Trigger: AAACGGGAACTTGAAAGGCAACGACAACTTGAGTGG...CTGTAGCTGAAGCCCTGTTTGTCTTTTAAACACTAGTTGGAAGCTCTCAATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CAA 90 bp TGCAATATGATTAGAGCATCGTACAAGGTAATAGCTTTGCCATGGAAAGAACTACCGTTCCCACTCAAGTaGTCGTTGCCTTTCAAGTTC +
Preference number: 5 (lower is better)
Translates to: CNMIRASYKVIALPWKELPFPLK*SLPFKF
Trigger: GAACTTGAAAGGCAACGACAACTTGAGTGGGAACGG...TAGTTCTTTCCATGGCAAAGCTATTACCTTGTACGATGCTCTAATCATATTGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CAA 90 bp CCAACTCAACCAGATAAATCTGAGACCGAACAAAAACACAGAGTGCTTTCTCATCTCAATTTCTTGCCTTaGGGTGGTCAATCGACATCT +
Preference number: 5 (lower is better)
Translates to: PTQPDKSETEQKHRVLSHLNFLP*GGQSTS
Trigger: AGATGTCGATTGACCACCCAAAGGCAAGAAATTGAG...ATGAGAAAGCACTCTGTGTTTTTGTTCGGTCTCAGATTTATCTGGTTGAGTTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CAA 90 bp TTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAGGAAAACACTATGATCTTTCGTTCTaGTTCTTTCTGTTTCAGTCG +
Preference number: 5 (lower is better)
Translates to: FSDPRSHNETCSEDKGKHYDLSF*FFLFQS
Trigger: CGACTGAAACAGAAAGAACAAGAACGAAAGATCATA...GTGTTTTCCTTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CAA 90 bp CTTCTAGAACTTGAGGCTACTTACACAGAGGGATCTTTTCTCTCCTACCATCCCTATGATCTTTCGTTCTaGTTCTTTCTGTTTCAGTCG +
Preference number: 5 (lower is better)
Translates to: LLELEATYTEGSFLSYHPYDLSF*FFLFQS
Trigger: CGACTGAAACAGAAAGAACAAGAACGAAAGATCATA...GGGATGGTAGGAGAGAAAAGATCCCTCTGTGTAAGTAGCCTCAAGTTCTAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CAA 90 bp TGCAATATGATTAGAGCATCGTACAAGGTAATAGCTTTGCCATGGAAAGAACTACTTCGTGGAGTTTTCTaGGTCTCTGATGCTCGTCCT +
Preference number: 5 (lower is better)
Translates to: CNMIRASYKVIALPWKELLRGVF*VSDARP
Trigger: AGGACGAGCATCAGAGACCAAGAAAACTCCACGAAG...TAGTTCTTTCCATGGCAAAGCTATTACCTTGTACGATGCTCTAATCATATTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CAA 90 bp TGCAATATGATTAGAGCATCGTACAAGGTAATAGCTTTGCCATGGAAAGAACTATCTTGTGCTTCCTGTTaGCCTTTTTCCTCGCCATCC +
Preference number: 5 (lower is better)
Translates to: CNMIRASYKVIALPWKELSCASC*PFSSPS
Trigger: GGATGGCGAGGAAAAAGGCAAACAGGAAGCACAAGA...TAGTTCTTTCCATGGCAAAGCTATTACCTTGTACGATGCTCTAATCATATTGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CAA 90 bp ACCTTCGCTTTAATTGGGCTCATTCTATACGTCTTTAAAACAGAGATACTGAACTCTTGTGCTTCCTGTTaGCCTTTTTCCTCGCCATCC +
Preference number: 5 (lower is better)
Translates to: TFALIGLILYVFKTEILNSCASC*PFSSPS
Trigger: GGATGGCGAGGAAAAAGGCAAACAGGAAGCACAAGA...GTTCAGTATCTCTGTTTTAAAGACGTATAGAATGAGCCCAATTAAAGCGAAGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CAA 90 bp ACCTTCGCTTTAATTGGGCTCATTCTATACGTCTTTAAAACAGAGATACTGAACAAAAGCCGACCCAGCTaGTCTTGTGCTTCCTGTTTG +
Preference number: 5 (lower is better)
Translates to: TFALIGLILYVFKTEILNKSRPS*SCASCL
Trigger: CAAACAGGAAGCACAAGACAAGCTGGGTCGGCTTTT...GTTCAGTATCTCTGTTTTAAAGACGTATAGAATGAGCCCAATTAAAGCGAAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CAA 90 bp AGACTGTGGATATCGTTGATCGTAACGACCTCAGTGGTGTTGTCTACTGATTTTAAGTGGTTGTCTTTTTaGGCTCTCCAAGGATATAGG +
Preference number: 5 (lower is better)
Translates to: RLWISLIVTTSVVLSTDFKWLSF*ALQGYR
Trigger: CCTATATCCTTGGAGAGCCAAAAAAGACAACCACTT...AAAATCAGTAGACAACACCACTGAGGTCGTTACGATCAACGATATCCACAGTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CAA 90 bp TGCAATATGATTAGAGCATCGTACAAGGTAATAGCTTTGCCATGGAAAGAACTAAAACCACCACATGTCTaGCTGTTCCAGGACGGTGAT +
Preference number: 5 (lower is better)
Translates to: CNMIRASYKVIALPWKELKPPHV*LFQDGD
Trigger: ATCACCGTCCTGGAACAGCAAGACATGTGGTGGTTT...TAGTTCTTTCCATGGCAAAGCTATTACCTTGTACGATGCTCTAATCATATTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CAA 90 bp TGCAATATGATTAGAGCATCGTACAAGGTAATAGCTTTGCCATGGAAAGAACTACCAACCCTTCTGACCTaGAACTTCTCCAAACCACCA +
Preference number: 5 (lower is better)
Translates to: CNMIRASYKVIALPWKELPTLLT*NFSKPP
Trigger: TGGTGGTTTGGAGAAGTTCAAGGTCAGAAGGGTTGG...TAGTTCTTTCCATGGCAAAGCTATTACCTTGTACGATGCTCTAATCATATTGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CAA 90 bp TTGTTTCATGAAACAGGAAATTGTTTCGGGGCAGGGAGGATTGTCGAGAATGATTCCATTGCCAATCTTTaGACGAACTCCTTGAAGTCT +
Preference number: 5 (lower is better)
Translates to: LFHETGNCFGAGRIVENDSIANL*TNSLKS
Trigger: AGACTTCAAGGAGTTCGTCAAAAGATTGGCAATGGA...ATCATTCTCGACAATCCTCCCTGCCCCGAAACAATTTCCTGTTTCATGAAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CAA 90 bp TTGTTTCATGAAACAGGAAATTGTTTCGGGGCAGGGAGGATTGTCGAGAATGATTGGGACCTAAAACGATaGTTTGTCATTGTGCATACC +
Preference number: 5 (lower is better)
Translates to: LFHETGNCFGAGRIVENDWDLKR*FVIVHT
Trigger: GGTATGCACAATGACAAACAATCGTTTTAGGTCCCA...ATCATTCTCGACAATCCTCCCTGCCCCGAAACAATTTCCTGTTTCATGAAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CAA 90 bp TTCAGCGACCCTAGAAGCCATAATGAGACCTGTAGTGAGGACAAAGGAAAACACCCTCCATACGGACAATaGGTTACATTACAAATTACA +
Preference number: 5 (lower is better)
Translates to: FSDPRSHNETCSEDKGKHPPYGQ*VTLQIT
Trigger: TGTAATTTGTAATGTAACCAATTGTCCGTATGGAGG...GTGTTTTCCTTTGTCCTCACTACAGGTCTCATTATGGCTTCTAGGGTCGCTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CAA 90 bp CCAACTCAACCAGATAAATCTGAGACCGAACAAAAACACAGAGTGCTTTCTCATCACATGCAGCATTCCTaGATAGTGGGTCTTTTTGCA +
Preference number: 5 (lower is better)
Translates to: PTQPDKSETEQKHRVLSHHMQHS*IVGLFA
Trigger: TGCAAAAAGACCCACTATCAAGGAATGCTGCATGTG...ATGAGAAAGCACTCTGTGTTTTTGTTCGGTCTCAGATTTATCTGGTTGAGTTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CAA 90 bp GATAAATCTGAGACCGAACAAAAACACAGAGTGCTTTCTCATGTGGCTACAAGGACGACCTCAGTGGTGTaGTCTACTGATTTTATGCTA +
Preference number: 5 (lower is better)
Translates to: DKSETEQKHRVLSHVATRTTSVV*STDFML
Trigger: TAGCATAAAATCAGTAGACAACACCACTGAGGTCGT...CCTTGTAGCCACATGAGAAAGCACTCTGTGTTTTTGTTCGGTCTCAGATTTATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CAA 90 bp TTTATTGAGAGCTTCCAACTAGTGTTTAAAAGACAAACAGGGCTTCAGCTACAGAGACTGTGGATATCGTaGATCGTAACGACCTCAGTG +
Preference number: 5 (lower is better)
Translates to: FIESFQLVFKRQTGLQLQRLWIS*IVTTSV
Trigger: CACTGAGGTCGTTACGATCAACGATATCCACAGTCT...CTGTAGCTGAAGCCCTGTTTGTCTTTTAAACACTAGTTGGAAGCTCTCAATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CAA 90 bp TGCAATATGATTAGAGCATCGTACAAGGTAATAGCTTTGCCATGGAAAGAACTAAGAAATAGCAACTGGTaGCTGTTTCATGACAGGGGG +
Preference number: 5 (lower is better)
Translates to: CNMIRASYKVIALPWKELRNSNW*LFHDRG
Trigger: CCCCCTGTCATGAAACAGCAACCAGTTGCTATTTCT...TAGTTCTTTCCATGGCAAAGCTATTACCTTGTACGATGCTCTAATCATATTGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CAA 90 bp AGGAGAAACAGACATTATGGAAACCGAAAATCAAAAGGAAGTATGCAACAACCTAGAAATAGCAACTGGTaGCTGTTTCATGACAGGGGG +
Preference number: 5 (lower is better)
Translates to: RRNRHYGNRKSKGSMQQPRNSNW*LFHDRG
Trigger: CCCCCTGTCATGAAACAGCAACCAGTTGCTATTTCT...AGGTTGTTGCATACTTCCTTTTGATTTTCGGTTTCCATAATGTCTGTTTCTCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456489.1
CDS-3UTR CAA 90 bp TGCAATATGATTAGAGCATCGTACAAGGTAATAGCTTTGCCATGGAAAGAACTATTTTCTCTGCATAGTTaGCAGGGAACCACCCTGTCT +
Preference number: 5 (lower is better)
Translates to: CNMIRASYKVIALPWKELFSLHS*QGTTLS
Trigger: AGACAGGGTGGTTCCCTGCAAACTATGCAGAGAAAA...TAGTTCTTTCCATGGCAAAGCTATTACCTTGTACGATGCTCTAATCATATTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CAA 90 bp ACCTTCGCTTTAATTGGGCTCATTCTATACGTCTTTAAAACAGAGATACTGAACTTTTCTCTGCATAGTTaGCAGGGAACCACCCTGTCT +
Preference number: 5 (lower is better)
Translates to: TFALIGLILYVFKTEILNFSLHS*QGTTLS
Trigger: AGACAGGGTGGTTCCCTGCAAACTATGCAGAGAAAA...GTTCAGTATCTCTGTTTTAAAGACGTATAGAATGAGCCCAATTAAAGCGAAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CAA 90 bp CATTGTAATTACCATTTATTGTACATCTACATGCACTGCCCCATGAGATTACAGTTTTCTCTGCATAGTTaGCAGGGAACCACCCTGTCT +
Preference number: 5 (lower is better)
Translates to: HCNYHLLYIYMHCPMRLQFSLHS*QGTTLS
Trigger: AGACAGGGTGGTTCCCTGCAAACTATGCAGAGAAAA...CTGTAATCTCATGGGGCAGTGCATGTAGATGTACAATAAATGGTAATTACAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440794.2
CDS-3UTR CAA 90 bp ATCCCTGAATATCAGGTGCAAATCATGGCAGGGCAAATTTCTTTCTTTTTATTTCCAACCCTTCTGACCTaGAACTTCTCCAAACCACCA +
Preference number: 5 (lower is better)
Translates to: IPEYQVQIMAGQISFFLFPTLLT*NFSKPP
Trigger: TGGTGGTTTGGAGAAGTTCAAGGTCAGAAGGGTTGG...AAATAAAAAGAAAGAAATTTGCCCTGCCATGATTTGCACCTGATATTCAGGGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437126.5
CDS-3UTR CAA 90 bp ATACCAAATGGTGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGTACTGCAGGTTTGATTaGGGGCTGAAGACTTTGTCG +
Preference number: 5 (lower is better)
Translates to: IPNGGFLEKEYNFQTACVYCRFD*GLKTLS
Trigger: CGACAAAGTCTTCAGCCCCAAATCAAACCTGCAGTA...CACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCACCATTTGGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CAA 90 bp ATACCAAATGGTGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGCTAATCCAATTAGGCTaGCTTGAATGCCACCAAGGC +
Preference number: 5 (lower is better)
Translates to: IPNGGFLEKEYNFQTACVLIQLG*LECHQG
Trigger: GCCTTGGTGGCATTCAAGCAAGCCTAATTGGATTAG...CACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCACCATTTGGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CAA 90 bp TTGTTTCATGAAACAGGAAATTGTTTCGGGGCAGGGAGGATTGTCGAGAATGATGAACTAAAGAAGTTATaGGGAGGTGGATATGAACTC +
Preference number: 5 (lower is better)
Translates to: LFHETGNCFGAGRIVENDELKKL*GGGYEL
Trigger: GAGTTCATATCCACCTCCCAATAACTTCTTTAGTTC...ATCATTCTCGACAATCCTCCCTGCCCCGAAACAATTTCCTGTTTCATGAAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CAA 90 bp CCAAATGGTGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGGCCCCAGGTGAGATGAGTTaGCAATTTCTGTCAACATTT +
Preference number: 5 (lower is better)
Translates to: PNGGFLEKEYNFQTACVAPGEMS*QFLSTF
Trigger: AAATGTTGACAGAAATTGCAAACTCATCTCACCTGG...GGCCACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCACCATTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CAA 90 bp TTTATTGAGAGCTTCCAACTAGTGTTTAAAAGACAAACAGGGCTTCAGCTACAGACAACATATGATTCATaGCTGGCTTGGGTCCATGTC +
Preference number: 5 (lower is better)
Translates to: FIESFQLVFKRQTGLQLQTTYDS*LAWVHV
Trigger: GACATGGACCCAAGCCAGCAATGAATCATATGTTGT...CTGTAGCTGAAGCCCTGTTTGTCTTTTAAACACTAGTTGGAAGCTCTCAATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CAA 90 bp CCAACTCAACCAGATAAATCTGAGACCGAACAAAAACACAGAGTGCTTTCTCATACGACCTCAGTGGTGTaGTCTACTGATTTTATGCTA +
Preference number: 5 (lower is better)
Translates to: PTQPDKSETEQKHRVLSHTTSVV*STDFML
Trigger: TAGCATAAAATCAGTAGACAACACCACTGAGGTCGT...ATGAGAAAGCACTCTGTGTTTTTGTTCGGTCTCAGATTTATCTGGTTGAGTTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS TCA 90 bp AATTGTTGTTGTTCATCTTCTAAAACTGGTTCCTCTGGTAGCCTCTaGTCTACAGATGTTGAGCTTATGACAGATATACCACTGCCAGAT +
Preference number: 5 (lower is better)
Translates to: NCCCSSSKTGSSGSL*STDVELMTDIPLPD
Trigger: ATCTGGCAGTGGTATATCTGTCATAAGCTCAACATCTGTAGATCAGAGGCTACCAGAGGAACCAGTTTTAGAAGATGAACAACAACAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000379960.9
ENST00000381283.7
ENST00000381285.8
ENST00000381291.8
ENST00000381318.8
ENST00000399338.8
ENST00000399349.5
ENST00000399352.5
ENST00000399353.5
ENST00000399355.6
ENST00000399367.7
ENST00000488166.1
CDS TCA 90 bp AATTCAGTAATGAATCCAGATATTGGCTTTAAACTATGGAACTGCTaGTCATGCTTCGCTCTTTCCTCTACAGTTATGGCCCAGATATCC +
Preference number: 5 (lower is better)
Translates to: NSVMNPDIGFKLWNC*SCFALSSTVMAQIS
Trigger: GGATATCTGGGCCATAACTGTAGAGGAAAGAGCGAAGCATGATCAGCAGTTCCATAGTTTAAAGCCAATATCTGGATTCATTACTGAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470742.5
CDS-3UTR CAA 90 bp CCAAATGGTGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGGCCTATGGAAAACTCCACTaGATCCATTCTTCCATCATT +
Preference number: 5 (lower is better)
Translates to: PNGGFLEKEYNFQTACVAYGKLH*IHSSII
Trigger: AATGATGGAAGAATGGATCAAGTGGAGTTTTCCATA...GGCCACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCACCATTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CAA 90 bp ATACCAAATGGTGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGCTCAATTTCTTGCCTTaGGGTGGTCAATCGACATCT +
Preference number: 5 (lower is better)
Translates to: IPNGGFLEKEYNFQTACVLNFLP*GGQSTS
Trigger: AGATGTCGATTGACCACCCAAAGGCAAGAAATTGAG...CACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCACCATTTGGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CAA 90 bp TGCAATATGATTAGAGCATCGTACAAGGTAATAGCTTTGCCATGGAAAGAACTACTCAATTTCTTGCCTTaGGGTGGTCAATCGACATCT +
Preference number: 5 (lower is better)
Translates to: CNMIRASYKVIALPWKELLNFLP*GGQSTS
Trigger: AGATGTCGATTGACCACCCAAAGGCAAGAAATTGAG...TAGTTCTTTCCATGGCAAAGCTATTACCTTGTACGATGCTCTAATCATATTGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CAA 90 bp AGACTGTGGATATCGTTGATCGTAACGACCTCAGTGGTGTTGTCTACTGATTTTTATGATCTTTCGTTCTaGTTCTTTCTGTTTCAGTCG +
Preference number: 5 (lower is better)
Translates to: RLWISLIVTTSVVLSTDFYDLSF*FFLFQS
Trigger: CGACTGAAACAGAAAGAACAAGAACGAAAGATCATA...AAAATCAGTAGACAACACCACTGAGGTCGTTACGATCAACGATATCCACAGTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CAA 90 bp GGAATCAGAACTGAATCCACGCAACAATACACCAGTGTGTTTTCATTGACATATTTCCTGAGCTCGTCTTaGGGCTTCTTCTTTTTGTTT +
Preference number: 5 (lower is better)
Translates to: GIRTESTQQYTSVFSLTYFLSSS*GFFFLF
Trigger: AAACAAAAAGAAGAAGCCCAAAGACGAGCTCAGGAA...ATATGTCAATGAAAACACACTGGTGTATTGTTGCGTGGATTCAGTTCTGATTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000381318.8
CDS-3UTR CAA 90 bp TTTATTGAGAGCTTCCAACTAGTGTTTAAAAGACAAACAGGGCTTCAGCTACAGTTCCTGAGCTCGTCTTaGGGCTTCTTCTTTTTGTTT +
Preference number: 5 (lower is better)
Translates to: FIESFQLVFKRQTGLQLQFLSSS*GFFFLF
Trigger: AAACAAAAAGAAGAAGCCCAAAGACGAGCTCAGGAA...CTGTAGCTGAAGCCCTGTTTGTCTTTTAAACACTAGTTGGAAGCTCTCAATAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CAA 90 bp ATACCAAATGGTGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGGTCGCTTTCTTTCAGTaGGGGTCAACATATCCAAGA +
Preference number: 5 (lower is better)
Translates to: IPNGGFLEKEYNFQTACVVAFFQ*GSTYPR
Trigger: TCTTGGATATGTTGACCCCAACTGAAAGAAAGCGAC...CACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCACCATTTGGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381285.8
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CAA 90 bp TATCCTTGTCGCTTTCTTTCAGTTGGGGTCAACATATCCAAGAGATGTAAGTCTGTATCTTGTTACCCGTaGCATAGGCTTCAGTATAAA +
Preference number: 5 (lower is better)
Translates to: YPCRFLSVGVNISKRCKSVSCYP*HRLQYK
Trigger: TTTATACTGAAGCCTATGCAACGGGTAACAAGATAC...AGACTTACATCTCTTGGATATGTTGACCCCAACTGAAAGAAAGCGACAAGGATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381285.8
CDS-3UTR CAA 90 bp TGCAATATGATTAGAGCATCGTACAAGGTAATAGCTTTGCCATGGAAAGAACTAACAACATATGATTCATaGCTGGCTTGGGTCCATGTC +
Preference number: 5 (lower is better)
Translates to: CNMIRASYKVIALPWKELTTYDS*LAWVHV
Trigger: GACATGGACCCAAGCCAGCAATGAATCATATGTTGT...TAGTTCTTTCCATGGCAAAGCTATTACCTTGTACGATGCTCTAATCATATTGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CAA 90 bp CCAACTCAACCAGATAAATCTGAGACCGAACAAAAACACAGAGTGCTTTCTCATTATGGAAAACTCCACTaGATCCATTCTTCCATCATT +
Preference number: 5 (lower is better)
Translates to: PTQPDKSETEQKHRVLSHYGKLH*IHSSII
Trigger: AATGATGGAAGAATGGATCAAGTGGAGTTTTCCATA...ATGAGAAAGCACTCTGTGTTTTTGTTCGGTCTCAGATTTATCTGGTTGAGTTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CAA 90 bp GACAGACTCCTTGTTGGCAAGGAGCATTTAATTTCTATGAAATATAGCCCAGGTTTGCTTCTGGAGTTGTaGCTTATTGTGTATTTCTCT +
Preference number: 5 (lower is better)
Translates to: DRLLVGKEHLISMKYSPGLLLEL*LIVYFS
Trigger: AGAGAAATACACAATAAGCAACAACTCCAGAAGCAA...ACCTGGGCTATATTTCATAGAAATTAAATGCTCCTTGCCAACAAGGAGTCTGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CAA 90 bp CCAACTCAACCAGATAAATCTGAGACCGAACAAAAACACAGAGTGCTTTCTCATCTTTTGCTTCTGGAGTaGTTGCTTATTGTGTATTTC +
Preference number: 5 (lower is better)
Translates to: PTQPDKSETEQKHRVLSHLLLLE*LLIVYF
Trigger: GAAATACACAATAAGCAACAACTCCAGAAGCAAAAG...ATGAGAAAGCACTCTGTGTTTTTGTTCGGTCTCAGATTTATCTGGTTGAGTTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CAA 90 bp ACCTTCGCTTTAATTGGGCTCATTCTATACGTCTTTAAAACAGAGATACTGAACTTCCTGAGCTCGTCTTaGGGCTTCTTCTTTTTGTTT +
Preference number: 5 (lower is better)
Translates to: TFALIGLILYVFKTEILNFLSSS*GFFFLF
Trigger: AAACAAAAAGAAGAAGCCCAAAGACGAGCTCAGGAA...GTTCAGTATCTCTGTTTTAAAGACGTATAGAATGAGCCCAATTAAAGCGAAGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CAA 90 bp ATACCAAATGGTGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGAAGTGGTTGTCTTTTTaGGCTCTCCAAGGATATAGG +
Preference number: 5 (lower is better)
Translates to: IPNGGFLEKEYNFQTACVKWLSF*ALQGYR
Trigger: CCTATATCCTTGGAGAGCCAAAAAAGACAACCACTT...CACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCACCATTTGGTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381318.8
ENST00000399367.7
CDS-3UTR CAA 90 bp GGAATCAGAACTGAATCCACGCAACAATACACCAGTGTGTTTTCATTGACATATGTATCTTGTTACCCGTaGCATAGGCTTCAGTATAAA +
Preference number: 5 (lower is better)
Translates to: GIRTESTQQYTSVFSLTYVSCYP*HRLQYK
Trigger: TTTATACTGAAGCCTATGCAACGGGTAACAAGATAC...ATATGTCAATGAAAACACACTGGTGTATTGTTGCGTGGATTCAGTTCTGATTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000381318.8
CDS-3UTR CAA 90 bp ATACCAAATGGTGGTTTCTTAGAAAAGGAATACAATTTCCAGACAGCATGTGTGCAGGATACTTTTCATTaGATCACGCCACCATCCATT +
Preference number: 5 (lower is better)
Translates to: IPNGGFLEKEYNFQTACVQDTFH*ITPPSI
Trigger: AATGGATGGTGGCGTGATCAAATGAAAAGTATCCTG...CACACATGCTGTCTGGAAATTGTATTCCTTTTCTAAGAAACCACCATTTGGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CAA 90 bp GGAATCAGAACTGAATCCACGCAACAATACACCAGTGTGTTTTCATTGACATATTTCACACATAATAAGTaGCCAAAGGAACACTCAAAC +
Preference number: 5 (lower is better)
Translates to: GIRTESTQQYTSVFSLTYFTHNK*PKEHSN
Trigger: GTTTGAGTGTTCCTTTGGCAACTTATTATGTGTGAA...ATATGTCAATGAAAACACACTGGTGTATTGTTGCGTGGATTCAGTTCTGATTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381318.8
CDS-3UTR CAA 90 bp ACCTTCGCTTTAATTGGGCTCATTCTATACGTCTTTAAAACAGAGATACTGAACTTGCTTCTGGAGTTGTaGCTTATTGTGTATTTCTCT +
Preference number: 5 (lower is better)
Translates to: TFALIGLILYVFKTEILNLLLEL*LIVYFS
Trigger: AGAGAAATACACAATAAGCAACAACTCCAGAAGCAA...GTTCAGTATCTCTGTTTTAAAGACGTATAGAATGAGCCCAATTAAAGCGAAGGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000399349.5
ENST00000399352.5
CDS-3UTR CAA 90 bp ATCCCTGAATATCAGGTGCAAATCATGGCAGGGCAAATTTCTTTCTTTTTATTTCCTGGGCAATTTATTTaGAGAGTGATCCCTGAATAT +
Preference number: 5 (lower is better)
Translates to: IPEYQVQIMAGQISFFLFPGQFI*RVIPEY
Trigger: ATATTCAGGGATCACTCTCAAAATAAATTGCCCAGG...AAATAAAAAGAAAGAAATTTGCCCTGCCATGATTTGCACCTGATATTCAGGGAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437126.5
CDS-3UTR CAA 90 bp AGAAACAGACATTATGGAAACCGAAAATCAAAAGGAAGTATGCAACAACCTGAATATGGAAAACTCCACTaGATCCATTCTTCCATCATT +
Preference number: 5 (lower is better)
Translates to: RNRHYGNRKSKGSMQQPEYGKLH*IHSSII
Trigger: AATGATGGAAGAATGGATCAAGTGGAGTTTTCCATA...TTCAGGTTGTTGCATACTTCCTTTTGATTTTCGGTTTCCATAATGTCTGTTTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000456489.1
CDS GCA 72 bp GGGCGGGTCCGCGCTGCCGCCCCAGGGACAAATCAGTaGCGCTCACGCGCCGCTGGGAGGGACGCAGGAGCC +
Preference number: 6 (lower is better)
Translates to: GRVRAAAPGTNQ*RSRAAGRDAGA
Trigger: GGCTCCTGCGTCCCTCCCAGCGGCGCGTGAGCGGCACTGATTTGTCCCTGGGGCGGCAGCGCGGACCCGCCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000381285.8
ENST00000381291.8
ENST00000381318.8
ENST00000399349.5
ENST00000399352.5
ENST00000399353.5
ENST00000399355.6
ENST00000399367.7
ENST00000444491.5
ENST00000451686.5
ENST00000470742.5
CDS CCA 72 bp CGCCCCAGGGACAAATCAGTGCCGCTCACGCGCCGCTaGGAGGGACGCAGGAGCCGCAGCCCCGCACACCAT +
Preference number: 6 (lower is better)
Translates to: RPRDKSVPLTRR*EGRRSRSPAHH
Trigger: ATGGTGTGCGGGGCTGCGGCTCCTGCGTCCCTCCCAGCGGCGCGTGAGCGGCACTGATTTGTCCCTGGGGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000381285.8
ENST00000381291.8
ENST00000381318.8
ENST00000399349.5
ENST00000399352.5
ENST00000399353.5
ENST00000399355.6
ENST00000399367.7
ENST00000444491.5
ENST00000451686.5
ENST00000470742.5
CDS CCA 72 bp CCCAGAGCTACCAGGCAGACACGGCATTCAAGGGCCTaGCTGATCCTTGAGCCCTCAGTGGGCTGCAGACTC +
Preference number: 6 (lower is better)
Translates to: PRATRQTRHSRA*LILEPSVGCRL
Trigger: GAGTCTGCAGCCCACTGAGGGCTCAAGGATCAGCCAGGCCCTTGAATGCCGTGTCTGCCTGGTAGCTCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462212.5
ENST00000475422.5
ENST00000489261.1
CDS TCA 72 bp CAGGCAGACACGGCATTCAAGGGCCTGGCTGATCCTTaGGCCCTCAGTGGGCTGCAGACTCCCTTGTCATCC +
Preference number: 6 (lower is better)
Translates to: QADTAFKGLADP*ALSGLQTPLSS
Trigger: GGATGACAAGGGAGTCTGCAGCCCACTGAGGGCTCAAGGATCAGCCAGGCCCTTGAATGCCGTGTCTGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462212.5
ENST00000475422.5
ENST00000489261.1
CDS GCA 72 bp CTTACTTACCAACTTCCCTCCACGAAGTCCGCTCCTTaGCCACTCCTGGCACCTTCTGTCACACCCCTCCCA +
Preference number: 6 (lower is better)
Translates to: LTYQLPSTKSAP*PLLAPSVTPLP
Trigger: TGGGAGGGGTGTGACAGAAGGTGCCAGGAGTGGGCAAGGAGCGGACTTCGTGGAGGGAAGTTGGTAAGTAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462212.5
ENST00000475422.5
ENST00000489261.1
CDS CCA 72 bp GGATCCCATTGGCACTGGAGCAACAGCTGTAAGCGGTaGCATGCTGGCGATACCTCCCATACCAAATGCTGG +
Preference number: 6 (lower is better)
Translates to: GSHWHWSNSCKR*HAGDTSHTKCW
Trigger: CCAGCATTTGGTATGGGAGGTATCGCCAGCATGCCACCGCTTACAGCTGTTGCTCCAGTGCCAATGGGATCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000381291.8
ENST00000381318.8
ENST00000399338.8
ENST00000399349.5
ENST00000399352.5
ENST00000399355.6
ENST00000399367.7
CDS CCA 72 bp AGAATGCTCCCTCTGGGGCTACACAGATGCCGCATTTaGGAAGGTGACAGCTTAAACCTCATCTCCGGGCGG +
Preference number: 6 (lower is better)
Translates to: RMLPLGLHRCRI*EGDSLNLISGR
Trigger: CCGCCCGGAGATGAGGTTTAAGCTGTCACCTTCCCAAATGCGGCATCTGTGTAGCCCCAGAGGGAGCATTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444491.5
ENST00000451686.5
CDS TCA 72 bp ATTGAGCTGGATTTCTACCCAACGAGTAAGGCTCCCTaGATCGCCCGTTCCCAGAGCTACCAGGCAGACACG +
Preference number: 6 (lower is better)
Translates to: IELDFYPTSKAP*IARSQSYQADT
Trigger: CGTGTCTGCCTGGTAGCTCTGGGAACGGGCGATTCAGGGAGCCTTACTCGTTGGGTAGAAATCCAGCTCAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462212.5
ENST00000475422.5
ENST00000489261.1
CDS GCA 72 bp TCAAGGGCCTGGCTGATCCTTGAGCCCTCAGTGGGCTaGAGACTCCCTTGTCATCCCGTGAAACTTACTTAC +
Preference number: 6 (lower is better)
Translates to: SRAWLILEPSVG*RLPCHPVKLTY
Trigger: GTAAGTAAGTTTCACGGGATGACAAGGGAGTCTGCAGCCCACTGAGGGCTCAAGGATCAGCCAGGCCCTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462212.5
ENST00000475422.5
ENST00000489261.1
CDS CAA 72 bp CCACTGGGAGCCCGGCAGGGGCTTATTTCTATGTTGTaGCTGCAGATTCTCACTCCCAACGACACAGCCTTC +
Preference number: 6 (lower is better)
Translates to: PLGARQGLISML*LQILTPNDTAF
Trigger: GAAGGCTGTGTCGTTGGGAGTGAGAATCTGCAGCAACAACATAGAAATAAGCCCCTGCCGGGCTCCCAGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000462212.5
ENST00000475422.5
ENST00000479424.5
ENST00000489261.1
CDS CAA 90 bp TCCCGTGAAACTTACTTACCAACTTCCCTCCACGAAGTCCGCTCCTaGCCCACTCCTGGCACCTTCTGTCACACCCCTCCCATAATTACC +
Preference number: 6 (lower is better)
Translates to: SRETYLPTSLHEVRS*PTPGTFCHTPPIIT
Trigger: GGTAATTATGGGAGGGGTGTGACAGAAGGTGCCAGGAGTGGGCAAGGAGCGGACTTCGTGGAGGGAAGTTGGTAAGTAAGTTTCACGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462212.5
ENST00000475422.5
ENST00000489261.1
CDS GCA 72 bp CACTGGGAGCCCGGCAGGGGCTTATTTCTATGTTGTTaGTGCAGATTCTCACTCCCAACGACACAGCCTTCT +
Preference number: 6 (lower is better)
Translates to: HWEPGRGLFLCC*CRFSLPTTQPS
Trigger: AGAAGGCTGTGTCGTTGGGAGTGAGAATCTGCAGCAACAACATAGAAATAAGCCCCTGCCGGGCTCCCAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000462212.5
ENST00000475422.5
ENST00000479424.5
ENST00000489261.1
CDS CCA 72 bp GGATCCCATTGGCACTGGAGCAACAGCTGTAAGCGGTaGCATGCTGGCGATACCTCCCATACCTATGAAGAA +
Preference number: 6 (lower is better)
Translates to: GSHWHWSNSCKR*HAGDTSHTYEE
Trigger: TTCTTCATAGGTATGGGAGGTATCGCCAGCATGCCACCGCTTACAGCTGTTGCTCCAGTGCCAATGGGATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379960.9
CDS CAA 72 bp TGTTGGAAACTGAGCCATGGTTCTGTTACTTTTACCTaGCTAATCGACGCCTCATCTCCGGGCGGGTCCGCG +
Preference number: 6 (lower is better)
Translates to: CWKLSHGSVTFT*LIDASSPGGSA
Trigger: CGCGGACCCGCCCGGAGATGAGGCGTCGATTAGCAAGGTAAAAGTAACAGAACCATGGCTCAGTTTCCAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000381285.8
ENST00000381291.8
ENST00000381318.8
ENST00000399349.5
ENST00000399352.5
ENST00000399353.5
ENST00000399355.6
ENST00000399367.7
ENST00000470742.5
CDS GCA 72 bp AGAACTCTTTGGCAATGTGGCTGCAGGATGAGCAAATaGAGGCAGAGGTTGTATAACAGGGGGAGCCCCGTT +
Preference number: 6 (lower is better)
Translates to: RTLWQCGCRMSK*RQRLYNRGSPV
Trigger: AACGGGGCTCCCCCTGTTATACAACCTCTGCCTGCATTTGCTCATCCTGCAGCCACATTGCCAAAGAGTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000379960.9
ENST00000381285.8
ENST00000381291.8
ENST00000381318.8
ENST00000399338.8
ENST00000399349.5
ENST00000399352.5
ENST00000399353.5
ENST00000399355.6
ENST00000399367.7
CDS GCA 72 bp GCTGCAAATGCTGGTGCGCTAGAAATAGCAACTGGTTaGTGTTTCATGACAGGGGGAAGTGCAGAGGGTAGC +
Preference number: 6 (lower is better)
Translates to: AANAGALEIATG*CFMTGGSAEGS
Trigger: GCTACCCTCTGCACTTCCCCCTGTCATGAAACAGCAACCAGTTGCTATTTCTAGCGCACCAGCATTTGCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381283.7
ENST00000381285.8
ENST00000399353.5
CDS GCA 72 bp CCTCCAAATGCTGGTGCGCTAGAAATAGCAACTGGTTaGTGTTTCATGACAGGGGGAAGTGCAGAGGGTAGC +
Preference number: 6 (lower is better)
Translates to: PPNAGALEIATG*CFMTGGSAEGS
Trigger: GCTACCCTCTGCACTTCCCCCTGTCATGAAACAGCAACCAGTTGCTATTTCTAGCGCACCAGCATTTGGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000456489.1
CDS CCA 72 bp AGACATTCCAACAACTGGAATGGATCCCATTGGCACTaGAGCAACAGCTGTAAGCGGTGGCATGCTGGCGAT +
Preference number: 6 (lower is better)
Translates to: RHSNNWNGSHWH*SNSCKRWHAGD
Trigger: ATCGCCAGCATGCCACCGCTTACAGCTGTTGCTCCAGTGCCAATGGGATCCATTCCAGTTGTTGGAATGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000379960.9
ENST00000381291.8
ENST00000381318.8
ENST00000399338.8
ENST00000399349.5
ENST00000399352.5
ENST00000399355.6
ENST00000399367.7
CDS CCA 72 bp CACAGCTGCAAATGCTGGTGCGCTAGAAATAGCAACTaGTTGCTGTTTCATGACAGGGGGAAGTGCAGAGGG +
Preference number: 6 (lower is better)
Translates to: HSCKCWCARNSN*LLFHDRGKCRG
Trigger: CCCTCTGCACTTCCCCCTGTCATGAAACAGCAACCAGTTGCTATTTCTAGCGCACCAGCATTTGCAGCTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381285.8
ENST00000399353.5
CDS CCA 72 bp TGTGGCTGCAAATGCTGGTGCGCTAGAAATAGCAACTaGTTGCTGTTTCATGACAGGGGGAAGTGCAGAGGG +
Preference number: 6 (lower is better)
Translates to: CGCKCWCARNSN*LLFHDRGKCRG
Trigger: CCCTCTGCACTTCCCCCTGTCATGAAACAGCAACCAGTTGCTATTTCTAGCGCACCAGCATTTGCAGCCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381283.7
CDS CAA 72 bp ATAACCTGGGCAATTTCTTCTCCCGAAACGACCGGCTaGGCTGCTGGAGAGGCTACTCGCTTTAGACTAGCA +
Preference number: 6 (lower is better)
Translates to: ITWAISSPETTG*AAGEATRFRLA
Trigger: TGCTAGTCTAAAGCGAGTAGCCTCTCCAGCAGCCAAGCCGGTCGTTTCGGGAGAAGAAATTGCCCAGGTTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399349.5
ENST00000399355.6
CDS CAA 90 bp CCTCAGAAACCACTGGGAGCCCGGCAGGGGCTTATTTCTATGTTGTaGCTGCAGATTCTCACTCCCAACGACACAGCCTTCTTCTTTATG +
Preference number: 6 (lower is better)
Translates to: PQKPLGARQGLISML*LQILTPNDTAFFFM
Trigger: CATAAAGAAGAAGGCTGTGTCGTTGGGAGTGAGAATCTGCAGCAACAACATAGAAATAAGCCCCTGCCGGGCTCCCAGTGGTTTCTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000462212.5
ENST00000475422.5
ENST00000479424.5
ENST00000489261.1
CDS CAA 90 bp CAGGCGCCTCCCAGGTTCACAGATGAACACATCAAAACCAATGTATaGAGCTGGATTTCTACCCAACGAGTAAGGCTCCCTGAATCGCCC +
Preference number: 6 (lower is better)
Translates to: QAPPRFTDEHIKTNV*SWISTQRVRLPESP
Trigger: GGGCGATTCAGGGAGCCTTACTCGTTGGGTAGAAATCCAGCTCAATACATTGGTTTTGATGTGTTCATCTGTGAACCTGGGAGGCGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462212.5
ENST00000475422.5
ENST00000489261.1
CDS TCA 72 bp CGTTATGTTGCGCTTTGTTATCAATTAGGGCAGACGTaGGCATGGCACCTCTCCAACAAGCACAGGCCAGAC +
Preference number: 6 (lower is better)
Translates to: RYVALCYQLGQT*AWHLSNKHRPD
Trigger: GTCTGGCCTGTGCTTGTTGGAGAGGTGCCATGCTCACGTCTGCCCTAATTGATAACAAAGCGCAACATAACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487427.5
CDS GCA 72 bp CTGCCTTTTAGAATGCTCCCTCTGGGGCTACACAGATaGCGCATTTGGGAAGGTGACAGCTTAAACCTCATC +
Preference number: 6 (lower is better)
Translates to: LPFRMLPLGLHR*RIWEGDSLNLI
Trigger: GATGAGGTTTAAGCTGTCACCTTCCCAAATGCGGCATCTGTGTAGCCCCAGAGGGAGCATTCTAAAAGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444491.5
CDS GCA 72 bp ACGCCTTTTAGAATGCTCCCTCTGGGGCTACACAGATaGCGCATTTGGGAAGGTGACAGCTTAAACCTCATC +
Preference number: 6 (lower is better)
Translates to: TPFRMLPLGLHR*RIWEGDSLNLI
Trigger: GATGAGGTTTAAGCTGTCACCTTCCCAAATGCGGCATCTGTGTAGCCCCAGAGGGAGCATTCTAAAAGGCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451686.5
CDS GCA 72 bp TACCCACTGGTCAAGATGCAGCTCAAGTGCCACTTCTaGAATGAAGCTTCCTTCATCAACCCAGGCAGGAGA +
Preference number: 6 (lower is better)
Translates to: YPLVKMQLKCHF*NEASFINPGRR
Trigger: TCTCCTGCCTGGGTTGATGAAGGAAGCTTCATTGCAGAAGTGGCACTTGAGCTGCATCTTGACCAGTGGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465143.1
CDS CCA 72 bp TCCCATACCAAATGCTGGTGCGCTAGAAATAGCAACTaGTTGCTGTTTCATGACAGGGGGAAGTGCAGAGGG +
Preference number: 6 (lower is better)
Translates to: SHTKCWCARNSN*LLFHDRGKCRG
Trigger: CCCTCTGCACTTCCCCCTGTCATGAAACAGCAACCAGTTGCTATTTCTAGCGCACCAGCATTTGGTATGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000381291.8
ENST00000381318.8
ENST00000399338.8
ENST00000399349.5
ENST00000399352.5
ENST00000399355.6
ENST00000399367.7
CDS CCA 72 bp AGGTGGAATGTATTCTGGAGGCAGGACAGGTGGCAGTaGTTGGCCAGACATAGCTACATCAATGAGGTGCAT +
Preference number: 6 (lower is better)
Translates to: RWNVFWRQDRWQ*LARHSYINEVH
Trigger: ATGCACCTCATTGATGTAGCTATGTCTGGCCAACCACTGCCACCTGTCCTGCCTCCAGAATACATTCCACCT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000379960.9
ENST00000381283.7
ENST00000381285.8
ENST00000381291.8
ENST00000381318.8
ENST00000399338.8
ENST00000399349.5
ENST00000399352.5
ENST00000399353.5
ENST00000399355.6
ENST00000399367.7
ENST00000488166.1
CDS CCA 72 bp GCTGTTAAGTTTTGCCAGGTAGAACGAACTGCTGGGTaGGGTGTGAAGGGATCAACTCATCTAAGTGCTGCC +
Preference number: 6 (lower is better)
Translates to: AVKFCQVERTAG*GVKGSTHLSAA
Trigger: GGCAGCACTTAGATGAGTTGATCCCTTCACACCCCACCCAGCAGTTCGTTCTACCTGGCAAAACTTAACAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444491.5
CDS CCA 72 bp TACCTTGCTAATCGACGCCTTTTAGAATGCTCCCTCTaGGGCTACACAGATGCCGCATTTGGGAAGGTGACA +
Preference number: 6 (lower is better)
Translates to: YLANRRLLECSL*GYTDAAFGKVT
Trigger: TGTCACCTTCCCAAATGCGGCATCTGTGTAGCCCCAGAGGGAGCATTCTAAAAGGCGTCGATTAGCAAGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451686.5
CDS CAA 72 bp TGGAATGTATTCTGGAGGCAGGACAGGTGGCAGTGGTaGGCCAGACATAGCTACATCAATGAGGTGCATTGC +
Preference number: 6 (lower is better)
Translates to: WNVFWRQDRWQW*ARHSYINEVHC
Trigger: GCAATGCACCTCATTGATGTAGCTATGTCTGGCCAACCACTGCCACCTGTCCTGCCTCCAGAATACATTCCA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000379960.9
ENST00000381283.7
ENST00000381285.8
ENST00000381291.8
ENST00000381318.8
ENST00000399338.8
ENST00000399349.5
ENST00000399352.5
ENST00000399353.5
ENST00000399355.6
ENST00000399367.7
ENST00000488166.1
CDS CAA 90 bp AGGCAGCACAGCAGGAGGGCTGGATGCTTCACTGTTTCCCAACAATaGTTTATTTCCAAAAGTGGAGGCCAAAGCCTTCCAGCCTCTTCA +
Preference number: 6 (lower is better)
Translates to: RQHSRRAGCFTVSQQ*FISKSGGQSLPASS
Trigger: TGAAGAGGCTGGAAGGCTTTGGCCTCCACTTTTGGAAATAAACAATTGTTGGGAAACAGTGAAGCATCCAGCCCTCCTGCTGTGCTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487427.5
CDS TCA 72 bp ACTGGTCAAGATGCAGCTCAAGTGCCACTTCTGCAATaGAGCTTCCTTCATCAACCCAGGCAGGAGAAGTTG +
Preference number: 6 (lower is better)
Translates to: TGQDAAQVPLLQ*SFLHQPRQEKL
Trigger: CAACTTCTCCTGCCTGGGTTGATGAAGGAAGCTTCATTGCAGAAGTGGCACTTGAGCTGCATCTTGACCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465143.1
CDS GCA 72 bp ATACCAAATGCTGGTGCGCTAGAAATAGCAACTGGTTaGTGTTTCATGACAGGGGGAAGTGCAGAGGGTAGC +
Preference number: 6 (lower is better)
Translates to: IPNAGALEIATG*CFMTGGSAEGS
Trigger: GCTACCCTCTGCACTTCCCCCTGTCATGAAACAGCAACCAGTTGCTATTTCTAGCGCACCAGCATTTGGTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000381291.8
ENST00000381318.8
ENST00000399338.8
ENST00000399349.5
ENST00000399352.5
ENST00000399355.6
ENST00000399367.7
CDS CCA 72 bp AACTCATCTAAGTGCTGCCTTTTAGAATGCTCCCTCTaGGGCTACACAGATGCCGCATTTGGGAAGGTGACA +
Preference number: 6 (lower is better)
Translates to: NSSKCCLLECSL*GYTDAAFGKVT
Trigger: TGTCACCTTCCCAAATGCGGCATCTGTGTAGCCCCAGAGGGAGCATTCTAAAAGGCAGCACTTAGATGAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444491.5
CDS CCA 72 bp ATTACCTCCAAATGCTGGTGCGCTAGAAATAGCAACTaGTTGCTGTTTCATGACAGGGGGAAGTGCAGAGGG +
Preference number: 6 (lower is better)
Translates to: ITSKCWCARNSN*LLFHDRGKCRG
Trigger: CCCTCTGCACTTCCCCCTGTCATGAAACAGCAACCAGTTGCTATTTCTAGCGCACCAGCATTTGGAGGTAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000456489.1
CDS CCA 72 bp CTCATTCACCACCCACCCCAGCACAGTAGCACCCAATaGCTAAAGTGCTACTTTGAAGTGACTAAAGGACTC +
Preference number: 6 (lower is better)
Translates to: LIHHPPQHSSTQ*LKCYFEVTKGL
Trigger: GAGTCCTTTAGTCACTTCAAAGTAGCACTTTAGCCATTGGGTGCTACTGTGCTGGGGTGGGTGGTGAATGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462212.5
ENST00000475422.5
ENST00000489261.1
CDS CCA 72 bp TCCCAACTATTCACAGCAGATTTCTGGCTCCTGCACTaGATTCCCATACTGCCAGCCAACCAAGACACACAT +
Preference number: 6 (lower is better)
Translates to: SQLFTADFWLLH*IPILPANQDTH
Trigger: ATGTGTGTCTTGGTTGGCTGGCAGTATGGGAATCCAGTGCAGGAGCCAGAAATCTGCTGTGAATAGTTGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465143.1
CDS GCA 72 bp TCTTGCCTTCGATTCCGTTCCCACTCAAGTTGTCGTTaGCTTTCAAGTTCCCGTTTTGCAGCCTGTGACATT +
Preference number: 6 (lower is better)
Translates to: SCLRFRSHSSCR*LSSSRFAACDI
Trigger: AATGTCACAGGCTGCAAAACGGGAACTTGAAAGGCAACGACAACTTGAGTGGGAACGGAATCGAAGGCAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474132.1
CDS CCA 72 bp AAAAGAAGGTGGAATGTATTCTGGAGGCAGGACAGGTaGCAGTGGTTGGCCAGACATAGCTACATCAATGAG +
Preference number: 6 (lower is better)
Translates to: KRRWNVFWRQDR*QWLARHSYINE
Trigger: CTCATTGATGTAGCTATGTCTGGCCAACCACTGCCACCTGTCCTGCCTCCAGAATACATTCCACCTTCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000379960.9
ENST00000381283.7
ENST00000381285.8
ENST00000381291.8
ENST00000381318.8
ENST00000399338.8
ENST00000399349.5
ENST00000399352.5
ENST00000399353.5
ENST00000399355.6
ENST00000399367.7
ENST00000488166.1
CDS CCA 72 bp GGCTTTCATCCACCCATTCCCCATGACTATGTCTCCTaGCTGGATAGTGATTTCATCATGGCTTCTGGATTC +
Preference number: 6 (lower is better)
Translates to: GFHPPIPHDYVS*LDSDFIMASGF
Trigger: GAATCCAGAAGCCATGATGAAATCACTATCCAGCCAGGAGACATAGTCATGGGGAATGGGTGGATGAAAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419241.1
CDS CAA 90 bp AAAAGAAGGTGGAATGTATTCTGGAGGCAGGACAGGTGGCAGTGGTaGGCCAGACATAGCTACATCAATGAGGTGCATTGCCAGGATAAA +
Preference number: 6 (lower is better)
Translates to: KRRWNVFWRQDRWQW*ARHSYINEVHCQDK
Trigger: TTTATCCTGGCAATGCACCTCATTGATGTAGCTATGTCTGGCCAACCACTGCCACCTGTCCTGCCTCCAGAATACATTCCACCTTCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000379960.9
ENST00000381283.7
ENST00000381285.8
ENST00000381291.8
ENST00000381318.8
ENST00000399338.8
ENST00000399349.5
ENST00000399352.5
ENST00000399353.5
ENST00000399355.6
ENST00000399367.7
ENST00000488166.1
CDS GCA 72 bp CACCCACCCCAGCACAGTAGCACCCAATGGCTAAAGTaGTACTTTGAAGTGACTAAAGGACTCAATAGCTTT +
Preference number: 6 (lower is better)
Translates to: HPPQHSSTQWLK*YFEVTKGLNSF
Trigger: AAAGCTATTGAGTCCTTTAGTCACTTCAAAGTAGCACTTTAGCCATTGGGTGCTACTGTGCTGGGGTGGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462212.5
ENST00000475422.5
ENST00000489261.1
CDS GCA 72 bp GTAAGATCTTACCCACTGGTCAAGATGCAGCTCAAGTaGCACTTCTGCAATGAAGCTTCCTTCATCAACCCA +
Preference number: 6 (lower is better)
Translates to: VRSYPLVKMQLK*HFCNEASFINP
Trigger: TGGGTTGATGAAGGAAGCTTCATTGCAGAAGTGGCACTTGAGCTGCATCTTGACCAGTGGGTAAGATCTTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465143.1
CDS CCA 72 bp TATGGCCCAGATATCCAGGCTGCCACCAAAAGGTGTTaGAAACTGAGCCATGGTTCTGTTACTTTTACCTTG +
Preference number: 6 (lower is better)
Translates to: YGPDIQAATKRC*KLSHGSVTFTL
Trigger: CAAGGTAAAAGTAACAGAACCATGGCTCAGTTTCCAACACCTTTTGGTGGCAGCCTGGATATCTGGGCCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000381283.7
ENST00000381285.8
ENST00000381291.8
ENST00000381318.8
ENST00000399349.5
ENST00000399352.5
ENST00000399353.5
ENST00000399355.6
ENST00000399367.7
ENST00000444491.5
ENST00000451686.5
ENST00000470742.5
CDS CAA 72 bp AGCAGGAGGGCTGGATGCTTCACTGTTTCCCAACAATaGTTTATTTCCAAAAGTGGAGGCCAAAGCCTTCCA +
Preference number: 6 (lower is better)
Translates to: SRRAGCFTVSQQ*FISKSGGQSLP
Trigger: TGGAAGGCTTTGGCCTCCACTTTTGGAAATAAACAATTGTTGGGAAACAGTGAAGCATCCAGCCCTCCTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487427.5
CDS CAA 90 bp ACCCTTGTGTGGAATAACATAAAGGACCTCTCGTTATGTTGCGCTTaGTTATCAATTAGGGCAGACGTGAGCATGGCACCTCTCCAACAA +
Preference number: 6 (lower is better)
Translates to: TLVWNNIKDLSLCCA*LSIRADVSMAPLQQ
Trigger: TTGTTGGAGAGGTGCCATGCTCACGTCTGCCCTAATTGATAACAAAGCGCAACATAACGAGAGGTCCTTTATGTTATTCCACACAAGGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487427.5
CDS GCA 72 bp GGCAGTGGTTGGCCAGACATAGCTACATCAATGAGGTaGATTGCCAGGATAAATTCCTCTGCTGTAAGTTTT +
Preference number: 6 (lower is better)
Translates to: GSGWPDIATSMR*IARINSSAVSF
Trigger: AAAACTTACAGCAGAGGAATTTATCCTGGCAATGCACCTCATTGATGTAGCTATGTCTGGCCAACCACTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000379960.9
ENST00000381283.7
ENST00000381285.8
ENST00000381291.8
ENST00000381318.8
ENST00000399338.8
ENST00000399349.5
ENST00000399352.5
ENST00000399353.5
ENST00000399355.6
ENST00000399367.7
ENST00000488166.1
CDS CCA 72 bp ATCCACCCATTCCCCTTTAACCATGACTATGTCTCCTaGCTGGATAGTGATTTCATCATGGCTTCTGGATTC +
Preference number: 6 (lower is better)
Translates to: IHPFPFNHDYVS*LDSDFIMASGF
Trigger: GAATCCAGAAGCCATGATGAAATCACTATCCAGCCAGGAGACATAGTCATGGTTAAAGGGGAATGGGTGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000381318.8
ENST00000399355.6
CDS CCA 72 bp TTCATCCACCCATTCCCCATGACTATGTCTCCTGGCTaGATAGTGATTTCATCATGGCTTCTGGATTCAAAG +
Preference number: 6 (lower is better)
Translates to: FIHPFPMTMSPG*IVISSWLLDSK
Trigger: CTTTGAATCCAGAAGCCATGATGAAATCACTATCCAGCCAGGAGACATAGTCATGGGGAATGGGTGGATGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419241.1
CDS CAA 72 bp CCCAGGTTCACAGATGAACACATCAAAACCAATGTATaGAGCTGGATTTCTACCCAACGAGTAAGGCTCCCT +
Preference number: 6 (lower is better)
Translates to: PRFTDEHIKTNV*SWISTQRVRLP
Trigger: AGGGAGCCTTACTCGTTGGGTAGAAATCCAGCTCAATACATTGGTTTTGATGTGTTCATCTGTGAACCTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462212.5
ENST00000475422.5
ENST00000489261.1
CDS CAA 90 bp AGCCATGGTTCTGTTACTTTTACCTTGCTAATCGACGCCTTTTCATaGGGACACCTCCAAATGTTCAGTAATGTGGAGGTTTCTTCACCG +
Preference number: 6 (lower is better)
Translates to: SHGSVTFTLLIDAFS*GHLQMFSNVEVSSP
Trigger: CGGTGAAGAAACCTCCACATTACTGAACATTTGGAGGTGTCCCAATGAAAAGGCGTCGATTAGCAAGGTAAAAGTAACAGAACCATGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444491.5
CDS GCA 72 bp TGGTTGGCCAGACATAGCTACATCAATGAGGTGCATTaGCAGGATAAATTCCTCTGCTGTAAGTTTTCCATC +
Preference number: 6 (lower is better)
Translates to: WLARHSYINEVH*QDKFLCCKFSI
Trigger: GATGGAAAACTTACAGCAGAGGAATTTATCCTGGCAATGCACCTCATTGATGTAGCTATGTCTGGCCAACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000379960.9
ENST00000381283.7
ENST00000381285.8
ENST00000381291.8
ENST00000381318.8
ENST00000399338.8
ENST00000399349.5
ENST00000399352.5
ENST00000399353.5
ENST00000399355.6
ENST00000399367.7
ENST00000488166.1
CDS GCA 72 bp TGGGCAATTTCTGAAAAACAAGATCAAACACGGCAGTaGACTGTTAAGAGTCAGCAGGAGAAAAGGCCAAGA +
Preference number: 6 (lower is better)
Translates to: WAISEKQDQTRQ*TVKSQQEKRPR
Trigger: TCTTGGCCTTTTCTCCTGCTGACTCTTAACAGTGCACTGCCGTGTTTGATCTTGTTTTTCAGAAATTGCCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000462212.5
ENST00000475422.5
ENST00000489261.1
CDS CCA 72 bp ACCCATTCCCCTTTAACCATGACTATGTCTCCTGGCTaGATAGTGATTTCATCATGGCTTCTGGATTCAAAG +
Preference number: 6 (lower is better)
Translates to: THSPLTMTMSPG*IVISSWLLDSK
Trigger: CTTTGAATCCAGAAGCCATGATGAAATCACTATCCAGCCAGGAGACATAGTCATGGTTAAAGGGGAATGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381291.8
ENST00000381318.8
ENST00000399355.6
CDS CAA 72 bp TGTTGGAAACTGAGCCATGGTTCTGTTACTTTTACCTaGCTAATCGACGCCTTTTCATTGGGACACCTCCAA +
Preference number: 6 (lower is better)
Translates to: CWKLSHGSVTFT*LIDAFSLGHLQ
Trigger: TTGGAGGTGTCCCAATGAAAAGGCGTCGATTAGCAAGGTAAAAGTAACAGAACCATGGCTCAGTTTCCAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444491.5
CDS CAA 72 bp CCCAACGACACAGCCTTCTTCTTTATGGCTCACATTTaGAGAGTGATCCCTGAATATCAGGTGCAAATCATG +
Preference number: 6 (lower is better)
Translates to: PNDTAFFFMAHI*RVIPEYQVQIM
Trigger: CATGATTTGCACCTGATATTCAGGGATCACTCTCAAAATGTGAGCCATAAAGAAGAAGGCTGTGTCGTTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462212.5
ENST00000475422.5
ENST00000479424.5
ENST00000489261.1
CDS CAA 72 bp TGGAATAACATAAAGGACCTCTCGTTATGTTGCGCTTaGTTATCAATTAGGGCAGACGTGAGCATGGCACCT +
Preference number: 6 (lower is better)
Translates to: WNNIKDLSLCCA*LSIRADVSMAP
Trigger: AGGTGCCATGCTCACGTCTGCCCTAATTGATAACAAAGCGCAACATAACGAGAGGTCCTTTATGTTATTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487427.5
CDS TCA 72 bp GTGCAGAAATTTGCGCGGCCCCAAGCAATTGGTCACTaGATTGAACACAAGTTGATTTTTAATGATCAGTGG +
Preference number: 6 (lower is better)
Translates to: VQKFARPQAIGH*IEHKLIFNDQW
Trigger: CCACTGATCATTAAAAATCAACTTGTGTTCAATTCAGTGACCAATTGCTTGGGGCCGCGCAAATTTCTGCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381284.7
CDS GCA 72 bp CTTGTGTGGAATAACATAAAGGACCTCTCGTTATGTTaGGCTTTGTTATCAATTAGGGCAGACGTGAGCATG +
Preference number: 6 (lower is better)
Translates to: LVWNNIKDLSLC*ALLSIRADVSM
Trigger: CATGCTCACGTCTGCCCTAATTGATAACAAAGCGCAACATAACGAGAGGTCCTTTATGTTATTCCACACAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487427.5
CDS CCA 72 bp CTTCACTGTTTCCCAACAATTGTTTATTTCCAAAAGTaGAGGCCAAAGCCTTCCAGCCTCTTCACAAAGTCA +
Preference number: 6 (lower is better)
Translates to: LHCFPTIVYFQK*RPKPSSLFTKS
Trigger: TGACTTTGTGAAGAGGCTGGAAGGCTTTGGCCTCCACTTTTGGAAATAAACAATTGTTGGGAAACAGTGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487427.5
CDS TCA 72 bp ATGAATCCAGATATTGGCTTTAAACTATGGAACTGCTaGTCATGCTTCGCTCTTTCCTCTACAGTTATGGCC +
Preference number: 6 (lower is better)
Translates to: MNPDIGFKLWNC*SCFALSSTVMA
Trigger: GGCCATAACTGTAGAGGAAAGAGCGAAGCATGATCAGCAGTTCCATAGTTTAAAGCCAATATCTGGATTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000381283.7
ENST00000381285.8
ENST00000381291.8
ENST00000381318.8
ENST00000399338.8
ENST00000399349.5
ENST00000399352.5
ENST00000399353.5
ENST00000399355.6
ENST00000399367.7
ENST00000444491.5
ENST00000451686.5
ENST00000470742.5
CDS CAA 72 bp TCTGTTACTTTTACCTTGCTAATCGACGCCTTTTCATaGGGACACCTCCAAATGTTCAGTAATGTGGAGGTT +
Preference number: 6 (lower is better)
Translates to: SVTFTLLIDAFS*GHLQMFSNVEV
Trigger: AACCTCCACATTACTGAACATTTGGAGGTGTCCCAATGAAAAGGCGTCGATTAGCAAGGTAAAAGTAACAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444491.5
CDS TCA 72 bp TGTTCATCTTCTAAAACTGGTTCCTCTGGTAGCCTCTaGTCTACAGATGTTGAGCTTATGACAGATATACCA +
Preference number: 6 (lower is better)
Translates to: CSSSKTGSSGSL*STDVELMTDIP
Trigger: TGGTATATCTGTCATAAGCTCAACATCTGTAGATCAGAGGCTACCAGAGGAACCAGTTTTAGAAGATGAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000379960.9
ENST00000381283.7
ENST00000381285.8
ENST00000381291.8
ENST00000381318.8
ENST00000399338.8
ENST00000399349.5
ENST00000399352.5
ENST00000399353.5
ENST00000399355.6
ENST00000399367.7
ENST00000488166.1
CDS CAA 90 bp GAACACAAGTTGATTTTTAATGATCAGTGGGTATCTTGTTACCCGTaGCATAGGCTTCAGTATAAAACTAGAGAGTGGCATCCCTTTACA +
Preference number: 6 (lower is better)
Translates to: EHKLIFNDQWVSCYP*HRLQYKTREWHPFT
Trigger: TGTAAAGGGATGCCACTCTCTAGTTTTATACTGAAGCCTATGCAACGGGTAACAAGATACCCACTGATCATTAAAAATCAACTTGTGTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381284.7
CDS CAA 72 bp TTGATTTTTAATGATCAGTGGGTATCTTGTTACCCGTaGCATAGGCTTCAGTATAAAACTAGAGAGTGGCAT +
Preference number: 6 (lower is better)
Translates to: LIFNDQWVSCYP*HRLQYKTREWH
Trigger: ATGCCACTCTCTAGTTTTATACTGAAGCCTATGCAACGGGTAACAAGATACCCACTGATCATTAAAAATCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381284.7