RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ITPRIPL2 (Homo sapiens)

Ensembl gene IDs: ENSG00000205730

Ensembl transcript IDs: ENST00000381440.5, ENST00000566735.1

Found 290 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AAGCCACTAAAGCTTGTGGCAGCCACCAAATTTTCCAATGCCTTCTaGAATCTTGCATTTAACTGGCTTCACCGCCATTCCCACCCCCAC +
Preference number: 1 (lower is better)
Translates to: KPLKLVAATKFSNAF*NLAFNWLHRHSHPH
Trigger: GTGGGGGTGGGAATGGCGGTGAAGCCAGTTAAATGCAAGATTGCAGAAGGCATTGGAAAATTTGGTGGCTGCCACAAGCTTTAGTGGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381440.5
3UTR TCA 90 bp TCCAGACATCTCTGGCTGGTAGTAGGTAGTTTAATGAATGGATGTTaGCGGACAGGTACATATCCCAGCTTGTGGCCTGCGGCGATGTTA +
Preference number: 1 (lower is better)
Translates to: SRHLWLVVGSLMNGC*RTGTYPSLWPAAML
Trigger: TAACATCGCCGCAGGCCACAAGCTGGGATATGTACCTGTCCGTCAACATCCATTCATTAAACTACCTACTACCAGCCAGAGATGTCTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381440.5
3UTR CCA 90 bp TCTCTTGGACCACGTAAGACTGCCTGGACAAGGAAGAACCATCAATaGTTAGAGACCCAGCACAAACCACATGCTAAGCAGCAGGCATTT +
Preference number: 1 (lower is better)
Translates to: SLGPRKTAWTRKNHQ*LETQHKPHAKQQAF
Trigger: AAATGCCTGCTGCTTAGCATGTGGTTTGTGCTGGGTCTCTAACCATTGATGGTTCTTCCTTGTCCAGGCAGTCTTACGTGGTCCAAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381440.5
3UTR TCA 90 bp CAGGACACTCTAGTGGGTGTGAAGATGTCATATTATACTGGACTGTaGAGCGAGAAGGTGATATTTAAGCCACTAAAGCTTGTGGCAGCC +
Preference number: 1 (lower is better)
Translates to: QDTLVGVKMSYYTGL*SEKVIFKPLKLVAA
Trigger: GGCTGCCACAAGCTTTAGTGGCTTAAATATCACCTTCTCGCTTCACAGTCCAGTATAATATGACATCTTCACACCCACTAGAGTGTCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381440.5
3UTR GCA 90 bp TTTGAACCAATTCTTGGGTCTCCTGTTGGATGTCTTCCCATGGTTTaGCCAGGACACTCTAGTGGGTGTGAAGATGTCATATTATACTGG +
Preference number: 1 (lower is better)
Translates to: FEPILGSPVGCLPMV*PGHSSGCEDVILYW
Trigger: CCAGTATAATATGACATCTTCACACCCACTAGAGTGTCCTGGGCAAACCATGGGAAGACATCCAACAGGAGACCCAAGAATTGGTTCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381440.5
3UTR GCA 90 bp CTGTTTCTCTTTCAGCCCAAGGTCGCAAAGGATATAAGAAGCCAATaGAGCTTGGAGGAGAAGGATTCCTGTAAATCACTCACTATGATT +
Preference number: 1 (lower is better)
Translates to: LFLFQPKVAKDIRSQ*SLEEKDSCKSLTMI
Trigger: AATCATAGTGAGTGATTTACAGGAATCCTTCTCCTCCAAGCTGCATTGGCTTCTTATATCCTTTGCGACCTTGGGCTGAAAGAGAAACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381440.5
3UTR CCA 90 bp CAATATTTGAACCAATTCTTGGGTCTCCTGTTGGATGTCTTCCCATaGTTTGCCCAGGACACTCTAGTGGGTGTGAAGATGTCATATTAT +
Preference number: 1 (lower is better)
Translates to: QYLNQFLGLLLDVFP*FAQDTLVGVKMSYY
Trigger: ATAATATGACATCTTCACACCCACTAGAGTGTCCTGGGCAAACCATGGGAAGACATCCAACAGGAGACCCAAGAATTGGTTCAAATATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381440.5
3UTR CCA 90 bp TATCCCAGCTTGTGGCCTGCGGCGATGTTAGTTAGGCAAGCATGCTaGCTGCTTTTCAAGGTTGTACATTTAATAATAAATATAACTGGC +
Preference number: 1 (lower is better)
Translates to: YPSLWPAAMLVRQAC*LLFKVVHLIINITG
Trigger: GCCAGTTATATTTATTATTAAATGTACAACCTTGAAAAGCAGCCAGCATGCTTGCCTAACTAACATCGCCGCAGGCCACAAGCTGGGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381440.5
3UTR TCA 90 bp AAAAGCCACATCCTTCTACAGAATCCGTCTACACAGAACAATATTTaGACCAATTCTTGGGTCTCCTGTTGGATGTCTTCCCATGGTTTG +
Preference number: 1 (lower is better)
Translates to: KSHILLQNPSTQNNI*TNSWVSCWMSSHGL
Trigger: CAAACCATGGGAAGACATCCAACAGGAGACCCAAGAATTGGTTCAAATATTGTTCTGTGTAGACGGATTCTGTAGAAGGATGTGGCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381440.5
3UTR TCA 90 bp TCTGGAAGCTTCTCTAACCAACTCTCGATTGCCTTTCCATCTATGTaGCTTAACTTGTTGACAATCTTGTCAAACACCTGTGATTGCACC +
Preference number: 1 (lower is better)
Translates to: SGSFSNQLSIAFPSM*LNLLTILSNTCDCT
Trigger: GGTGCAATCACAGGTGTTTGACAAGATTGTCAACAAGTTAAGTCACATAGATGGAAAGGCAATCGAGAGTTGGTTAGAGAAGCTTCCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381440.5
3UTR TCA 90 bp CTTTCTCCAAAGCCAACATGTTTTATGCCTTCACCAGTGTTGTCTTaGATATGTATTTGGTTGCTACTTTGGTTCCAGACATCTCTGGCT +
Preference number: 1 (lower is better)
Translates to: LSPKPTCFMPSPVLS*ICIWLLLWFQTSLA
Trigger: AGCCAGAGATGTCTGGAACCAAAGTAGCAACCAAATACATATTCAAGACAACACTGGTGAAGGCATAAAACATGTTGGCTTTGGAGAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381440.5
3UTR TCA 90 bp AAGCCACATGTTACAGAAAAAGTGACTTACTCCATAGAGGTTACATaGGATGCTCTGGAAGCACTTAGGTTAATTCCTTCACAGTGTTTG +
Preference number: 1 (lower is better)
Translates to: KPHVTEKVTYSIEVT*DALEALRLIPSQCL
Trigger: CAAACACTGTGAAGGAATTAACCTAAGTGCTTCCAGAGCATCTCATGTAACCTCTATGGAGTAAGTCACTTTTTCTGTAACATGTGGCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381440.5
3UTR GCA 90 bp GAGCTTAATTTAACTGTCTTGGGCAACCATCATGCCTGGCTAATATaGCATATTATTTCCGTTGTACACAGTACATGTTTTGGTTTACTA +
Preference number: 1 (lower is better)
Translates to: ELNLTVLGNHHAWLI*HIISVVHSTCFGLL
Trigger: TAGTAAACCAAAACATGTACTGTGTACAACGGAAATAATATGGCATATTAGCCAGGCATGATGGTTGCCCAAGACAGTTAAATTAAGCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381440.5
3UTR CCA 90 bp TACAGAATTGAGCTTAATTTAACTGTCTTGGGCAACCATCATGCCTaGCTAATATGCCATATTATTTCCGTTGTACACAGTACATGTTTT +
Preference number: 1 (lower is better)
Translates to: YRIELNLTVLGNHHA*LICHIISVVHSTCF
Trigger: AAAACATGTACTGTGTACAACGGAAATAATATGGCATATTAGCCAGGCATGATGGTTGCCCAAGACAGTTAAATTAAGCTCAATTCTGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381440.5
3UTR TCA 90 bp TTTATAATCCTTCCAACCCTTGATGTCCCCCACTGTAGTAAACAATaGGTACAGAGGAAGTTGTGGTTGAGTATGGAAATATATATATAT +
Preference number: 1 (lower is better)
Translates to: FIILPTLDVPHCSKQ*VQRKLWLSMEIYIY
Trigger: ATATATATATATTTCCATACTCAACCACAACTTCCTCTGTACTCATTGTTTACTACAGTGGGGGACATCAAGGGTTGGAAGGATTATAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381440.5
3UTR-3UTR GCA 90 bp GAAGGCTCCCAAGACTGGTCAGTGGGAGTTACCAAAGGGTGTCTCGCCACAAAACCGGCTCCTCCCAGCTaGAAAATACACCCAACCTGG +
Preference number: 2 (lower is better)
Translates to: EGSQDWSVGVTKGCLATKPAPPS*KIHPTW
Trigger: CCAGGTTGGGTGTATTTTGCAGCTGGGAGGAGCCGG...TTTTGTGGCGAGACACCCTTTGGTAACTCCCACTGACCAGTCTTGGGAGCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381440.5
3UTR-3UTR TCA 90 bp TGTTTCCTAACCCAAACCTCTCTCACACCCTCACGCCATTTTCACTTCATTTCCACTCCTGACCTCAGGTaGTCCGCCCACCTCGCCTCC +
Preference number: 2 (lower is better)
Translates to: CFLTQTSLTPSRHFHFISTPDLR*SAHLAS
Trigger: GGAGGCGAGGTGGGCGGATCACCTGAGGTCAGGAGT...GGAAATGAAGTGAAAATGGCGTGAGGGTGTGAGAGAGGTTTGGGTTAGGAAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381440.5
3UTR-3UTR CCA 90 bp GAAGGCTCCCAAGACTGGTCAGTGGGAGTTACCAAAGGGTGTCTCGCCACAAAAAATCTTGCATTTAACTaGCTTCACCGCCATTCCCAC +
Preference number: 2 (lower is better)
Translates to: EGSQDWSVGVTKGCLATKNLAFN*LHRHSH
Trigger: GTGGGAATGGCGGTGAAGCCAGTTAAATGCAAGATT...TTTTGTGGCGAGACACCCTTTGGTAACTCCCACTGACCAGTCTTGGGAGCCTTC
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000381440.5
3UTR-3UTR CCA 90 bp TTGTGGCCTGCGGCGATGTTAGTTAGGCAAGCATGCTGGCTGCTTTTCAAGGTTTCTTGGGTCTCCTGTTaGATGTCTTCCCATGGTTTG +
Preference number: 2 (lower is better)
Translates to: LWPAAMLVRQACWLLFKVSWVSC*MSSHGL
Trigger: CAAACCATGGGAAGACATCCAACAGGAGACCCAAGA...AACCTTGAAAAGCAGCCAGCATGCTTGCCTAACTAACATCGCCGCAGGCCACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381440.5
3UTR-3UTR CCA 90 bp GAAGGCTCCCAAGACTGGTCAGTGGGAGTTACCAAAGGGTGTCTCGCCACAAAAGGTTCCAGACATCTCTaGCTGGTAGTAGGTAGTTTA +
Preference number: 2 (lower is better)
Translates to: EGSQDWSVGVTKGCLATKGSRHL*LVVGSL
Trigger: TAAACTACCTACTACCAGCCAGAGATGTCTGGAACC...TTTTGTGGCGAGACACCCTTTGGTAACTCCCACTGACCAGTCTTGGGAGCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381440.5
3UTR CAA 90 bp TCCGTCTACACAGAACAATATTTGAACCAATTCTTGGGTCTCCTGTaGGATGTCTTCCCATGGTTTGCCCAGGACACTCTAGTGGGTGTG +
Preference number: 2 (lower is better)
Translates to: SVYTEQYLNQFLGLL*DVFPWFAQDTLVGV
Trigger: CACACCCACTAGAGTGTCCTGGGCAAACCATGGGAAGACATCCAACAGGAGACCCAAGAATTGGTTCAAATATTGTTCTGTGTAGACGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381440.5
3UTR-3UTR CCA 90 bp CCTTCTGATTACTCATCTGCAAACTCCGACAGAGCAAAGAAGTTTACCCCAAATGGCTTTAGGAGCATTTaGTCAGGTGGGGGTGCTGTC +
Preference number: 2 (lower is better)
Translates to: PSDYSSANSDRAKKFTPNGFRSI*SGGGAV
Trigger: GACAGCACCCCCACCTGACCAAATGCTCCTAAAGCC...ATTTGGGGTAAACTTCTTTGCTCTGTCGGAGTTTGCAGATGAGTAATCAGAAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381440.5
3UTR-3UTR TCA 90 bp TGTTTCCTAACCCAAACCTCTCTCACACCCTCACGCCATTTTCACTTCATTTCCTTGCAAGACCTGTGCTaGATCAACAGGTCTCTTGGA +
Preference number: 2 (lower is better)
Translates to: CFLTQTSLTPSRHFHFISLQDLC*INRSLG
Trigger: TCCAAGAGACCTGTTGATTCAGCACAGGTCTTGCAA...GGAAATGAAGTGAAAATGGCGTGAGGGTGTGAGAGAGGTTTGGGTTAGGAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381440.5
3UTR-3UTR GCA 90 bp TGTTTCCTAACCCAAACCTCTCTCACACCCTCACGCCATTTTCACTTCATTTCCAACACTTGGACTGGCTaGATTTCCAATCAGGCAAGC +
Preference number: 2 (lower is better)
Translates to: CFLTQTSLTPSRHFHFISNTWTG*ISNQAS
Trigger: GCTTGCCTGATTGGAAATGCAGCCAGTCCAAGTGTT...GGAAATGAAGTGAAAATGGCGTGAGGGTGTGAGAGAGGTTTGGGTTAGGAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381440.5
3UTR-3UTR GCA 90 bp CCTTCTGATTACTCATCTGCAAACTCCGACAGAGCAAAGAAGTTTACCCCAAATGCTAGGAATGACCTTTaGGGGGAACTGTCCCCAAGA +
Preference number: 2 (lower is better)
Translates to: PSDYSSANSDRAKKFTPNARNDL*GELSPR
Trigger: TCTTGGGGACAGTTCCCCGCAAAGGTCATTCCTAGC...ATTTGGGGTAAACTTCTTTGCTCTGTCGGAGTTTGCAGATGAGTAATCAGAAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000381440.5
3UTR-3UTR CCA 90 bp AAACTGGTGGCCCCCAGGCTCAAACAAATGTTTGGCCCACATGGTGTTTTGGACGGATGGATGAGGCTTTaGGTAATTAACCTGAAAAAC +
Preference number: 2 (lower is better)
Translates to: KLVAPRLKQMFGPHGVLDGWMRL*VINLKN
Trigger: GTTTTTCAGGTTAATTACCCAAAGCCTCATCCATCC...GTCCAAAACACCATGTGGGCCAAACATTTGTTTGAGCCTGGGGGCCACCAGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000381440.5
3UTR CAA 90 bp CCTTCTACAGAATCCGTCTACACAGAACAATATTTGAACCAATTCTaGGGTCTCCTGTTGGATGTCTTCCCATGGTTTGCCCAGGACACT +
Preference number: 2 (lower is better)
Translates to: PSTESVYTEQYLNQF*GLLLDVFPWFAQDT
Trigger: AGTGTCCTGGGCAAACCATGGGAAGACATCCAACAGGAGACCCAAGAATTGGTTCAAATATTGTTCTGTGTAGACGGATTCTGTAGAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381440.5
3UTR-3UTR TCA 90 bp CCTTCTGATTACTCATCTGCAAACTCCGACAGAGCAAAGAAGTTTACCCCAAATAATCAGGCAAGCAGATaGGGGGCCATGCTGAACTTA +
Preference number: 2 (lower is better)
Translates to: PSDYSSANSDRAKKFTPNNQASR*GAMLNL
Trigger: TAAGTTCAGCATGGCCCCTCATCTGCTTGCCTGATT...ATTTGGGGTAAACTTCTTTGCTCTGTCGGAGTTTGCAGATGAGTAATCAGAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381440.5
3UTR-3UTR GCA 90 bp AAACTGGTGGCCCCCAGGCTCAAACAAATGTTTGGCCCACATGGTGTTTTGGACCATGCCTGGCTAATATaGCATATTATTTCCGTTGTA +
Preference number: 2 (lower is better)
Translates to: KLVAPRLKQMFGPHGVLDHAWLI*HIISVV
Trigger: TACAACGGAAATAATATGGCATATTAGCCAGGCATG...GTCCAAAACACCATGTGGGCCAAACATTTGTTTGAGCCTGGGGGCCACCAGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381440.5
3UTR-3UTR CCA 90 bp CCTTCTGATTACTCATCTGCAAACTCCGACAGAGCAAAGAAGTTTACCCCAAATACATATCCCAGCTTGTaGCCTGCGGCGATGTTAGTT +
Preference number: 2 (lower is better)
Translates to: PSDYSSANSDRAKKFTPNTYPSL*PAAMLV
Trigger: AACTAACATCGCCGCAGGCCACAAGCTGGGATATGT...ATTTGGGGTAAACTTCTTTGCTCTGTCGGAGTTTGCAGATGAGTAATCAGAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381440.5
3UTR-3UTR GCA 90 bp CCACATCCTTCTACAGAATCCGTCTACACAGAACAATATTTGAACCAATTCTTGTGTCTTCCCATGGTTTaGCCAGGACACTCTAGTGGG +
Preference number: 2 (lower is better)
Translates to: PHPSTESVYTEQYLNQFLCLPMV*PGHSSG
Trigger: CCCACTAGAGTGTCCTGGGCAAACCATGGGAAGACA...CAAGAATTGGTTCAAATATTGTTCTGTGTAGACGGATTCTGTAGAAGGATGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381440.5
3UTR-3UTR CCA 90 bp CCTTCTGATTACTCATCTGCAAACTCCGACAGAGCAAAGAAGTTTACCCCAAATTTGGATGTCTTCCCATaGTTTGCCCAGGACACTCTA +
Preference number: 2 (lower is better)
Translates to: PSDYSSANSDRAKKFTPNLDVFP*FAQDTL
Trigger: TAGAGTGTCCTGGGCAAACCATGGGAAGACATCCAA...ATTTGGGGTAAACTTCTTTGCTCTGTCGGAGTTTGCAGATGAGTAATCAGAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381440.5
3UTR-3UTR CCA 90 bp CCTTCTGATTACTCATCTGCAAACTCCGACAGAGCAAAGAAGTTTACCCCAAATCCACGTAAGACTGCCTaGACAAGGAAGAACCATCAA +
Preference number: 2 (lower is better)
Translates to: PSDYSSANSDRAKKFTPNPRKTA*TRKNHQ
Trigger: TTGATGGTTCTTCCTTGTCCAGGCAGTCTTACGTGG...ATTTGGGGTAAACTTCTTTGCTCTGTCGGAGTTTGCAGATGAGTAATCAGAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381440.5
3UTR-3UTR CCA 90 bp ATTGTAGCAGCTGAACCATATCTGATTAACTCTTTGGTCTCTGTTATTGGAACAAACTACGTAAGGCAGTaGTCGCAAACTGGTGGCCCC +
Preference number: 2 (lower is better)
Translates to: IVAAEPYLINSLVSVIGTNYVRQ*SQTGGP
Trigger: GGGGCCACCAGTTTGCGACCACTGCCTTACGTAGTT...TGTTCCAATAACAGAGACCAAAGAGTTAATCAGATATGGTTCAGCTGCTACAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381440.5
3UTR CAA 90 bp CAATCAGGCAAGCAGATGAGGGGCCATGCTGAACTTAAACTGCAATaGAGGACTGTTATAAATTTGGGAGAACAAGGAAGAATTCCAGGA +
Preference number: 2 (lower is better)
Translates to: QSGKQMRGHAELKLQ*RTVINLGEQGRIPG
Trigger: TCCTGGAATTCTTCCTTGTTCTCCCAAATTTATAACAGTCCTCAATTGCAGTTTAAGTTCAGCATGGCCCCTCATCTGCTTGCCTGATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381440.5
3UTR-3UTR TCA 90 bp CCTTCTGATTACTCATCTGCAAACTCCGACAGAGCAAAGAAGTTTACCCCAAATTCCTCCTGGGAACTGTaGGTTAAGTGTTATCTATGG +
Preference number: 2 (lower is better)
Translates to: PSDYSSANSDRAKKFTPNSSWEL*VKCYLW
Trigger: CCATAGATAACACTTAACTCACAGTTCCCAGGAGGA...ATTTGGGGTAAACTTCTTTGCTCTGTCGGAGTTTGCAGATGAGTAATCAGAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381440.5
3UTR-3UTR GCA 90 bp CCTTCTGATTACTCATCTGCAAACTCCGACAGAGCAAAGAAGTTTACCCCAAATCCTGCAGCTAGTTCTTaGTTCTTCTACTGGACTTCT +
Preference number: 2 (lower is better)
Translates to: PSDYSSANSDRAKKFTPNPAASS*FFYWTS
Trigger: AGAAGTCCAGTAGAAGAAGCAAGAACTAGCTGCAGG...ATTTGGGGTAAACTTCTTTGCTCTGTCGGAGTTTGCAGATGAGTAATCAGAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381440.5
3UTR-3UTR GCA 90 bp ATTGTAGCAGCTGAACCATATCTGATTAACTCTTTGGTCTCTGTTATTGGAACAAGAAAAGAGACAGACTaGCGTCAAGGGCTGTCTCCC +
Preference number: 2 (lower is better)
Translates to: IVAAEPYLINSLVSVIGTRKETD*RQGLSP
Trigger: GGGAGACAGCCCTTGACGGCAGTCTGTCTCTTTTCT...TGTTCCAATAACAGAGACCAAAGAGTTAATCAGATATGGTTCAGCTGCTACAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381440.5
3UTR-3UTR CCA 90 bp TGTTTCCTAACCCAAACCTCTCTCACACCCTCACGCCATTTTCACTTCATTTCCGATGTCATATTATACTaGACTGTGAAGCGAGAAGGT +
Preference number: 2 (lower is better)
Translates to: CFLTQTSLTPSRHFHFISDVILY*TVKREG
Trigger: ACCTTCTCGCTTCACAGTCCAGTATAATATGACATC...GGAAATGAAGTGAAAATGGCGTGAGGGTGTGAGAGAGGTTTGGGTTAGGAAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381440.5
3UTR CAA 90 bp TTGAATCATACAATTGTAGCAGCTGAACCATATCTGATTAACTCTTaGGTCTCTGTTATTGGAACAAAACCGACGCTATGCCTGCAGCCG +
Preference number: 2 (lower is better)
Translates to: LNHTIVAAEPYLINS*VSVIGTKPTLCLQP
Trigger: CGGCTGCAGGCATAGCGTCGGTTTTGTTCCAATAACAGAGACCAAAGAGTTAATCAGATATGGTTCAGCTGCTACAATTGTATGATTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381440.5
3UTR-3UTR TCA 90 bp CCTTCTGATTACTCATCTGCAAACTCCGACAGAGCAAAGAAGTTTACCCCAAATCAATGCAGTACCTTATaGCCCAACATTGACCTCAAA +
Preference number: 2 (lower is better)
Translates to: PSDYSSANSDRAKKFTPNQCSTL*PNIDLK
Trigger: TTTGAGGTCAATGTTGGGTCATAAGGTACTGCATTG...ATTTGGGGTAAACTTCTTTGCTCTGTCGGAGTTTGCAGATGAGTAATCAGAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381440.5
3UTR-3UTR TCA 90 bp ATTGTAGCAGCTGAACCATATCTGATTAACTCTTTGGTCTCTGTTATTGGAACATGTCTCGCCACAAAATaGCTGAGTCATCTTCCCCAG +
Preference number: 2 (lower is better)
Translates to: IVAAEPYLINSLVSVIGTCLATK*LSHLPQ
Trigger: CTGGGGAAGATGACTCAGTCATTTTGTGGCGAGACA...TGTTCCAATAACAGAGACCAAAGAGTTAATCAGATATGGTTCAGCTGCTACAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381440.5
3UTR-3UTR CCA 90 bp TGTTTCCTAACCCAAACCTCTCTCACACCCTCACGCCATTTTCACTTCATTTCCTTGCTGTTGTTACTGTaGAACTTCTTGCATGAGAAT +
Preference number: 2 (lower is better)
Translates to: CFLTQTSLTPSRHFHFISLLLLL*NFLHEN
Trigger: ATTCTCATGCAAGAAGTTCCACAGTAACAACAGCAA...GGAAATGAAGTGAAAATGGCGTGAGGGTGTGAGAGAGGTTTGGGTTAGGAAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381440.5
3UTR-3UTR CCA 90 bp ATTGTAGCAGCTGAACCATATCTGATTAACTCTTTGGTCTCTGTTATTGGAACAGAAGGCTCCCAAGACTaGTCAGTGGGAGTTACCAAA +
Preference number: 2 (lower is better)
Translates to: IVAAEPYLINSLVSVIGTEGSQD*SVGVTK
Trigger: TTTGGTAACTCCCACTGACCAGTCTTGGGAGCCTTC...TGTTCCAATAACAGAGACCAAAGAGTTAATCAGATATGGTTCAGCTGCTACAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381440.5
3UTR CAA 90 bp ACCGTGCAGTTTCTATCTTTGCATAAAGTTAGCAGACTGACTTCTTaGCACAATGCAGTACCTTATGACCCAACATTGACCTCAAAAGCT +
Preference number: 2 (lower is better)
Translates to: TVQFLSLHKVSRLTS*HNAVPYDPTLTSKA
Trigger: AGCTTTTGAGGTCAATGTTGGGTCATAAGGTACTGCATTGTGCAAAGAAGTCAGTCTGCTAACTTTATGCAAAGATAGAAACTGCACGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381440.5
3UTR-3UTR TCA 90 bp CCTTCTGATTACTCATCTGCAAACTCCGACAGAGCAAAGAAGTTTACCCCAAATATAAAGTTAGCAGACTaGCTTCTTTGCACAATGCAG +
Preference number: 2 (lower is better)
Translates to: PSDYSSANSDRAKKFTPNIKLAD*LLCTMQ
Trigger: CTGCATTGTGCAAAGAAGTCAGTCTGCTAACTTTAT...ATTTGGGGTAAACTTCTTTGCTCTGTCGGAGTTTGCAGATGAGTAATCAGAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381440.5
3UTR-3UTR TCA 90 bp ATTGTAGCAGCTGAACCATATCTGATTAACTCTTTGGTCTCTGTTATTGGAACATCGCCACAAAATGACTaGGTCATCTTCCCCAGAAAC +
Preference number: 2 (lower is better)
Translates to: IVAAEPYLINSLVSVIGTSPQND*VIFPRN
Trigger: GTTTCTGGGGAAGATGACTCAGTCATTTTGTGGCGA...TGTTCCAATAACAGAGACCAAAGAGTTAATCAGATATGGTTCAGCTGCTACAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381440.5
3UTR-3UTR TCA 90 bp TTAACTGTCTTGGGCAACCATCATGCCTGGCTAATATGCCATATTATTTCCGTTTCACCAGTGTTGTCTTaGATATGTATTTGGTTGCTA +
Preference number: 2 (lower is better)
Translates to: LTVLGNHHAWLICHIISVSPVLS*ICIWLL
Trigger: TAGCAACCAAATACATATTCAAGACAACACTGGTGA...AACGGAAATAATATGGCATATTAGCCAGGCATGATGGTTGCCCAAGACAGTTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381440.5
3UTR-3UTR TCA 90 bp TTAACTGTCTTGGGCAACCATCATGCCTGGCTAATATGCCATATTATTTCCGTTCAGAGCCCAAGATACTaGACTATAAGTGAAATGTTT +
Preference number: 2 (lower is better)
Translates to: LTVLGNHHAWLICHIISVQSPRY*TISEMF
Trigger: AAACATTTCACTTATAGTTCAGTATCTTGGGCTCTG...AACGGAAATAATATGGCATATTAGCCAGGCATGATGGTTGCCCAAGACAGTTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381440.5
3UTR-3UTR CCA 90 bp ATTGTAGCAGCTGAACCATATCTGATTAACTCTTTGGTCTCTGTTATTGGAACAAAAACTGGCCCTAAGTaGTTTGATGTAGGATCTGAC +
Preference number: 2 (lower is better)
Translates to: IVAAEPYLINSLVSVIGTKTGPK*FDVGSD
Trigger: GTCAGATCCTACATCAAACCACTTAGGGCCAGTTTT...TGTTCCAATAACAGAGACCAAAGAGTTAATCAGATATGGTTCAGCTGCTACAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381440.5
3UTR CAA 90 bp AACAGAGCCCTAATAAAATACAGAATTGAGCTTAATTTAACTGTCTaGGGCAACCATCATGCCTGGCTAATATGCCATATTATTTCCGTT +
Preference number: 2 (lower is better)
Translates to: NRALIKYRIELNLTV*GNHHAWLICHIISV
Trigger: AACGGAAATAATATGGCATATTAGCCAGGCATGATGGTTGCCCAAGACAGTTAAATTAAGCTCAATTCTGTATTTTATTAGGGCTCTGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381440.5
3UTR CCA 72 bp CTCAGCCCACGATCATTCCAGGAAGGCTCCCAAGACTaGTCAGTGGGAGTTACCAAAGGGTGTCTCGCCACA +
Preference number: 3 (lower is better)
Translates to: LSPRSFQEGSQD*SVGVTKGCLAT
Trigger: TGTGGCGAGACACCCTTTGGTAACTCCCACTGACCAGTCTTGGGAGCCTTCCTGGAATGATCGTGGGCTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381440.5
3UTR GCA 72 bp GAAAAGAGACAGACTGCCGTCAAGGGCTGTCTCCCTTaGTCTTTTCCTAATTTGTCTCCTCTGCCCACGACC +
Preference number: 3 (lower is better)
Translates to: EKRQTAVKGCLP*SFPNLSPLPTT
Trigger: GGTCGTGGGCAGAGGAGACAAATTAGGAAAAGAGCAAGGGAGACAGCCCTTGACGGCAGTCTGTCTCTTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381440.5
3UTR CCA 72 bp CACGATCATTCCAGGAAGGCTCCCAAGACTGGTCAGTaGGAGTTACCAAAGGGTGTCTCGCCACAAAATGAC +
Preference number: 3 (lower is better)
Translates to: HDHSRKAPKTGQ*ELPKGVSPQND
Trigger: GTCATTTTGTGGCGAGACACCCTTTGGTAACTCCCACTGACCAGTCTTGGGAGCCTTCCTGGAATGATCGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381440.5
3UTR-3UTR CAA 90 bp GAAGGCTCCCAAGACTGGTCAGTGGGAGTTACCAAAGGGTGTCTCGCCACAAAATTCTTGGGTCTCCTGTaGGATGTCTTCCCATGGTTT +
Preference number: 3 (lower is better)
Translates to: EGSQDWSVGVTKGCLATKFLGLL*DVFPWF
Trigger: AAACCATGGGAAGACATCCAACAGGAGACCCAAGAA...TTTTGTGGCGAGACACCCTTTGGTAACTCCCACTGACCAGTCTTGGGAGCCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381440.5
3UTR CCA 72 bp CCACGTAAGACTGCCTGGACAAGGAAGAACCATCAATaGTTAGAGACCCAGCACAAACCACATGCTAAGCAG +
Preference number: 3 (lower is better)
Translates to: PRKTAWTRKNHQ*LETQHKPHAKQ
Trigger: CTGCTTAGCATGTGGTTTGTGCTGGGTCTCTAACCATTGATGGTTCTTCCTTGTCCAGGCAGTCTTACGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381440.5
3UTR-3UTR CAA 90 bp TTGTGGCCTGCGGCGATGTTAGTTAGGCAAGCATGCTGGCTGCTTTTCAAGGTTATGCCTTCTGCAATCTaGCATTTAACTGGCTTCACC +
Preference number: 3 (lower is better)
Translates to: LWPAAMLVRQACWLLFKVMPSAI*HLTGFT
Trigger: GGTGAAGCCAGTTAAATGCAAGATTGCAGAAGGCAT...AACCTTGAAAAGCAGCCAGCATGCTTGCCTAACTAACATCGCCGCAGGCCACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381440.5
3UTR-3UTR CAA 90 bp GAAGGCTCCCAAGACTGGTCAGTGGGAGTTACCAAAGGGTGTCTCGCCACAAAACCTTATGACCCAACATaGACCTCAAAAGCTAGGAAT +
Preference number: 3 (lower is better)
Translates to: EGSQDWSVGVTKGCLATKPYDPT*TSKARN
Trigger: ATTCCTAGCTTTTGAGGTCAATGTTGGGTCATAAGG...TTTTGTGGCGAGACACCCTTTGGTAACTCCCACTGACCAGTCTTGGGAGCCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381440.5
3UTR GCA 72 bp TCTTTGGTCTCTGTTATTGGAACAAAACCGACGCTATaGCTGCAGCCGCCAGACTGCAACCAAAAACACAGT +
Preference number: 3 (lower is better)
Translates to: SLVSVIGTKPTL*LQPPDCNQKHS
Trigger: ACTGTGTTTTTGGTTGCAGTCTGGCGGCTGCAGGCATAGCGTCGGTTTTGTTCCAATAACAGAGACCAAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381440.5
3UTR-3UTR CAA 90 bp GAAGGCTCCCAAGACTGGTCAGTGGGAGTTACCAAAGGGTGTCTCGCCACAAAAAACTTGTTGACAATCTaGTCAAACACCTGTGATTGC +
Preference number: 3 (lower is better)
Translates to: EGSQDWSVGVTKGCLATKNLLTI*SNTCDC
Trigger: GCAATCACAGGTGTTTGACAAGATTGTCAACAAGTT...TTTTGTGGCGAGACACCCTTTGGTAACTCCCACTGACCAGTCTTGGGAGCCTTC
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000381440.5
3UTR-3UTR CAA 90 bp GAAGGCTCCCAAGACTGGTCAGTGGGAGTTACCAAAGGGTGTCTCGCCACAAAAGCCATATTATTTCCGTaGTACACAGTACATGTTTTG +
Preference number: 3 (lower is better)
Translates to: EGSQDWSVGVTKGCLATKAILFP*YTVHVL
Trigger: CAAAACATGTACTGTGTACAACGGAAATAATATGGC...TTTTGTGGCGAGACACCCTTTGGTAACTCCCACTGACCAGTCTTGGGAGCCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381440.5
3UTR GCA 72 bp AAGCTTGTGGCAGCCACCAAATTTTCCAATGCCTTCTaGAATCTTGCATTTAACTGGCTTCACCGCCATTCC +
Preference number: 3 (lower is better)
Translates to: KLVAATKFSNAF*NLAFNWLHRHS
Trigger: GGAATGGCGGTGAAGCCAGTTAAATGCAAGATTGCAGAAGGCATTGGAAAATTTGGTGGCTGCCACAAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381440.5
3UTR-3UTR CAA 90 bp TGTTTCCTAACCCAAACCTCTCTCACACCCTCACGCCATTTTCACTTCATTTCCCTAACCAACTCTCGATaGCCTTTCCATCTATGTGAC +
Preference number: 3 (lower is better)
Translates to: CFLTQTSLTPSRHFHFISLTNSR*PFHLCD
Trigger: GTCACATAGATGGAAAGGCAATCGAGAGTTGGTTAG...GGAAATGAAGTGAAAATGGCGTGAGGGTGTGAGAGAGGTTTGGGTTAGGAAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381440.5
3UTR-3UTR CAA 90 bp TTAACTGTCTTGGGCAACCATCATGCCTGGCTAATATGCCATATTATTTCCGTTTGCAGTGGTGTGATCTaGGCTCTCTGCAACCTTCAC +
Preference number: 3 (lower is better)
Translates to: LTVLGNHHAWLICHIISVCSGVI*ALCNLH
Trigger: GTGAAGGTTGCAGAGAGCCAAGATCACACCACTGCA...AACGGAAATAATATGGCATATTAGCCAGGCATGATGGTTGCCCAAGACAGTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381440.5
3UTR TCA 72 bp CTTCTTTGCACAATGCAGTACCTTATGACCCAACATTaGCCTCAAAAGCTAGGAATGACCTTTGCGGGGAAC +
Preference number: 3 (lower is better)
Translates to: LLCTMQYLMTQH*PQKLGMTFAGN
Trigger: GTTCCCCGCAAAGGTCATTCCTAGCTTTTGAGGTCAATGTTGGGTCATAAGGTACTGCATTGTGCAAAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381440.5
3UTR TCA 72 bp CCACCACTGAATCATCTTCCTCCATGTAGACAGGGATaGGAAGTCAAAGTCTTCATCAAGGTCAAAAGCCAC +
Preference number: 3 (lower is better)
Translates to: PPLNHLPPCRQG*EVKVFIKVKSH
Trigger: GTGGCTTTTGACCTTGATGAAGACTTTGACTTCTCATCCCTGTCTACATGGAGGAAGATGATTCAGTGGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381440.5
3UTR GCA 72 bp AAACCGACAGAAGGAACTTTCCCTGCAGCTAGTTCTTaGTTCTTCTACTGGACTTCTCTAAAAGCCACATCC +
Preference number: 3 (lower is better)
Translates to: KPTEGTFPAASS*FFYWTSLKATS
Trigger: GGATGTGGCTTTTAGAGAAGTCCAGTAGAAGAAGCAAGAACTAGCTGCAGGGAAAGTTCCTTCTGTCGGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381440.5
3UTR-3UTR CAA 90 bp TGTTTCCTAACCCAAACCTCTCTCACACCCTCACGCCATTTTCACTTCATTTCCGTCTTTGGATTTCTCTaGGTTCACTCGAATTCTCCT +
Preference number: 3 (lower is better)
Translates to: CFLTQTSLTPSRHFHFISVFGFL*VHSNSP
Trigger: AGGAGAATTCGAGTGAACCAAGAGAAATCCAAAGAC...GGAAATGAAGTGAAAATGGCGTGAGGGTGTGAGAGAGGTTTGGGTTAGGAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381440.5
3UTR TCA 72 bp CTTCCAACCCTTGATGTCCCCCACTGTAGTAAACAATaGGTACAGAGGAAGTTGTGGTTGAGTATGGAAATA +
Preference number: 3 (lower is better)
Translates to: LPTLDVPHCSKQ*VQRKLWLSMEI
Trigger: TATTTCCATACTCAACCACAACTTCCTCTGTACTCATTGTTTACTACAGTGGGGGACATCAAGGGTTGGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381440.5
3UTR TCA 72 bp GGAGTAACTGATCTTCAAGCACAGAGCCCAAGATACTaGACTATAAGTGAAATGTTTTGCAAGACCTGTGCT +
Preference number: 3 (lower is better)
Translates to: GVTDLQAQSPRY*TISEMFCKTCA
Trigger: AGCACAGGTCTTGCAAAACATTTCACTTATAGTTCAGTATCTTGGGCTCTGTGCTTGAAGATCAGTTACTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381440.5
3UTR TCA 72 bp CCGTGCAGTTTCTATCTTTGCATAAAGTTAGCAGACTaGCTTCTTTGCACAATGCAGTACCTTATGACCCAA +
Preference number: 3 (lower is better)
Translates to: PCSFYLCIKLAD*LLCTMQYLMTQ
Trigger: TTGGGTCATAAGGTACTGCATTGTGCAAAGAAGTCAGTCTGCTAACTTTATGCAAAGATAGAAACTGCACGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381440.5
3UTR-3UTR CAA 90 bp TTAACTGTCTTGGGCAACCATCATGCCTGGCTAATATGCCATATTATTTCCGTTTTTCAGATGCAATGCTaGGTGCTAGCAATTACCACA +
Preference number: 3 (lower is better)
Translates to: LTVLGNHHAWLICHIISVFQMQC*VLAITT
Trigger: TGTGGTAATTGCTAGCACCAAGCATTGCATCTGAAA...AACGGAAATAATATGGCATATTAGCCAGGCATGATGGTTGCCCAAGACAGTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381440.5
3UTR-3UTR CAA 90 bp TTAACTGTCTTGGGCAACCATCATGCCTGGCTAATATGCCATATTATTTCCGTTAGCAGACTGACTTCTTaGCACAATGCAGTACCTTAT +
Preference number: 3 (lower is better)
Translates to: LTVLGNHHAWLICHIISVSRLTS*HNAVPY
Trigger: ATAAGGTACTGCATTGTGCAAAGAAGTCAGTCTGCT...AACGGAAATAATATGGCATATTAGCCAGGCATGATGGTTGCCCAAGACAGTTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381440.5
3UTR TCA 72 bp AATGCCACGATGATAACACTGAACTTGTTTCCCTCTTaGAGGACATTGGAAATGTTACCGAGGTTCATTTTC +
Preference number: 3 (lower is better)
Translates to: NATMITLNLFPS*RTLEMLPRFIF
Trigger: GAAAATGAACCTCGGTAACATTTCCAATGTCCTTCAAGAGGGAAACAAGTTCAGTGTTATCATCGTGGCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381440.5
3UTR TCA 72 bp AAGCCAACATGTTTTATGCCTTCACCAGTGTTGTCTTaGATATGTATTTGGTTGCTACTTTGGTTCCAGACA +
Preference number: 3 (lower is better)
Translates to: KPTCFMPSPVLS*ICIWLLLWFQT
Trigger: TGTCTGGAACCAAAGTAGCAACCAAATACATATTCAAGACAACACTGGTGAAGGCATAAAACATGTTGGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381440.5
3UTR GCA 72 bp TTAACTGTCTTGGGCAACCATCATGCCTGGCTAATATaGCATATTATTTCCGTTGTACACAGTACATGTTTT +
Preference number: 3 (lower is better)
Translates to: LTVLGNHHAWLI*HIISVVHSTCF
Trigger: AAAACATGTACTGTGTACAACGGAAATAATATGGCATATTAGCCAGGCATGATGGTTGCCCAAGACAGTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381440.5
3UTR-3UTR CAA 90 bp ATTGTAGCAGCTGAACCATATCTGATTAACTCTTTGGTCTCTGTTATTGGAACAATTCCTTCACAGTGTTaGCTAGGATGTCAATTTTGG +
Preference number: 3 (lower is better)
Translates to: IVAAEPYLINSLVSVIGTIPSQC*LGCQFW
Trigger: CCAAAATTGACATCCTAGCAAACACTGTGAAGGAAT...TGTTCCAATAACAGAGACCAAAGAGTTAATCAGATATGGTTCAGCTGCTACAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR GCA 90 bp CCCAGCTTGTGGCCTGCGGCGATGTTAGTTAGGCAAGCATGCTGGCTGCTTTTCCCGGGCAGGAAGCGCTaGCGGACAGCGTGGCGACAG +
Preference number: 4 (lower is better)
Translates to: PSLWPAAMLVRQACWLLFPGRKR*RTAWRQ
Trigger: CTGTCGCCACGCTGTCCGGCAGCGCTTCCTGCCCGG...GAAAAGCAGCCAGCATGCTTGCCTAACTAACATCGCCGCAGGCCACAAGCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR GCA 90 bp CCCAGCTTGTGGCCTGCGGCGATGTTAGTTAGGCAAGCATGCTGGCTGCTTTTCCAGCAACCGCGCTGCTaGAAGTTCCCGGGCGTGCCC +
Preference number: 4 (lower is better)
Translates to: PSLWPAAMLVRQACWLLFQQPRC*KFPGVP
Trigger: GGGCACGCCCGGGAACTTGCAGCAGCGCGGTTGCTG...GAAAAGCAGCCAGCATGCTTGCCTAACTAACATCGCCGCAGGCCACAAGCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR CCA 90 bp GAAGGCTCCCAAGACTGGTCAGTGGGAGTTACCAAAGGGTGTCTCGCCACAAAACCGTCGGCCAGCTTCTaGCCCGGCCTGGCTCGCCTC +
Preference number: 4 (lower is better)
Translates to: EGSQDWSVGVTKGCLATKPSASF*PGLARL
Trigger: GAGGCGAGCCAGGCCGGGCCAGAAGCTGGCCGACGG...TTTTGTGGCGAGACACCCTTTGGTAACTCCCACTGACCAGTCTTGGGAGCCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR CCA 90 bp GAAGGCTCCCAAGACTGGTCAGTGGGAGTTACCAAAGGGTGTCTCGCCACAAAACCAACAGGGGCGCGCTaGGCAAGGGTGGCGGTGGTG +
Preference number: 4 (lower is better)
Translates to: EGSQDWSVGVTKGCLATKPTGAR*ARVAVV
Trigger: CACCACCGCCACCCTTGCCCAGCGCGCCCCTGTTGG...TTTTGTGGCGAGACACCCTTTGGTAACTCCCACTGACCAGTCTTGGGAGCCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR CCA 90 bp CCCAGCTTGTGGCCTGCGGCGATGTTAGTTAGGCAAGCATGCTGGCTGCTTTTCGGCCAGGAGGTCAACTaGGGCGGCTTCCCTCAGTGC +
Preference number: 4 (lower is better)
Translates to: PSLWPAAMLVRQACWLLFGQEVN*GGFPQC
Trigger: GCACTGAGGGAAGCCGCCCCAGTTGACCTCCTGGCC...GAAAAGCAGCCAGCATGCTTGCCTAACTAACATCGCCGCAGGCCACAAGCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR TCA 90 bp GAAGGCTCCCAAGACTGGTCAGTGGGAGTTACCAAAGGGTGTCTCGCCACAAAAGAGGAGAAGGCGGCGTaGCCCTCCAGACGGGGAGAC +
Preference number: 4 (lower is better)
Translates to: EGSQDWSVGVTKGCLATKEEKAA*PSRRGD
Trigger: GTCTCCCCGTCTGGAGGGTCACGCCGCCTTCTCCTC...TTTTGTGGCGAGACACCCTTTGGTAACTCCCACTGACCAGTCTTGGGAGCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR GCA 90 bp CCCAGCTTGTGGCCTGCGGCGATGTTAGTTAGGCAAGCATGCTGGCTGCTTTTCCTGTGGCCCAACACGTaGGGAGACAGGCGCACCTCA +
Preference number: 4 (lower is better)
Translates to: PSLWPAAMLVRQACWLLFLWPNT*GDRRTS
Trigger: TGAGGTGCGCCTGTCTCCGCACGTGTTGGGCCACAG...GAAAAGCAGCCAGCATGCTTGCCTAACTAACATCGCCGCAGGCCACAAGCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR GCA 90 bp CCCAGCTTGTGGCCTGCGGCGATGTTAGTTAGGCAAGCATGCTGGCTGCTTTTCACGATCCGGCTCACGTaGGCCTTGCTGTGGCCCAAC +
Preference number: 4 (lower is better)
Translates to: PSLWPAAMLVRQACWLLFTIRLT*ALLWPN
Trigger: GTTGGGCCACAGCAAGGCGCACGTGAGCCGGATCGT...GAAAAGCAGCCAGCATGCTTGCCTAACTAACATCGCCGCAGGCCACAAGCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR CCA 90 bp CCCAGCTTGTGGCCTGCGGCGATGTTAGTTAGGCAAGCATGCTGGCTGCTTTTCGGAAATGCCGGAGTCTaGAGCCGAGCGTGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: PSLWPAAMLVRQACWLLFGNAGV*SRAWSW
Trigger: CCAGCTCCACGCTCGGCTCCAGACTCCGGCATTTCC...GAAAAGCAGCCAGCATGCTTGCCTAACTAACATCGCCGCAGGCCACAAGCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR CCA 90 bp AAACTGGTGGCCCCCAGGCTCAAACAAATGTTTGGCCCACATGGTGTTTTGGACGCTTCTGGCCCGGCCTaGCTCGCCTCCTACCCTGGG +
Preference number: 4 (lower is better)
Translates to: KLVAPRLKQMFGPHGVLDASGPA*LASYPG
Trigger: CCCAGGGTAGGAGGCGAGCCAGGCCGGGCCAGAAGC...GTCCAAAACACCATGTGGGCCAAACATTTGTTTGAGCCTGGGGGCCACCAGTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR CCA 90 bp AAACTGGTGGCCCCCAGGCTCAAACAAATGTTTGGCCCACATGGTGTTTTGGACTGCGTCCCCACTGGGTaGCGGCCGCTGAGTCCAGCC +
Preference number: 4 (lower is better)
Translates to: KLVAPRLKQMFGPHGVLDCVPTG*RPLSPA
Trigger: GGCTGGACTCAGCGGCCGCCACCCAGTGGGGACGCA...GTCCAAAACACCATGTGGGCCAAACATTTGTTTGAGCCTGGGGGCCACCAGTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR GCA 90 bp CCCAGCTTGTGGCCTGCGGCGATGTTAGTTAGGCAAGCATGCTGGCTGCTTTTCGTGGCCAAGGAGCGCTaGAGATGCGACTGGAACCAG +
Preference number: 4 (lower is better)
Translates to: PSLWPAAMLVRQACWLLFVAKER*RCDWNQ
Trigger: CTGGTTCCAGTCGCATCTGCAGCGCTCCTTGGCCAC...GAAAAGCAGCCAGCATGCTTGCCTAACTAACATCGCCGCAGGCCACAAGCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR GCA 90 bp CCCAGCTTGTGGCCTGCGGCGATGTTAGTTAGGCAAGCATGCTGGCTGCTTTTCGGAGCTGCCCGTTCCTaGAGCCAACTCAGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: PSLWPAAMLVRQACWLLFGAARS*SQLSSF
Trigger: GAAGCTGCTGAGTTGGCTGCAGGAACGGGCAGCTCC...GAAAAGCAGCCAGCATGCTTGCCTAACTAACATCGCCGCAGGCCACAAGCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR GCA 90 bp AAACTGGTGGCCCCCAGGCTCAAACAAATGTTTGGCCCACATGGTGTTTTGGACGGCGGCTTCCCTCAGTaGCTTGGGCAGGGGACCCAC +
Preference number: 4 (lower is better)
Translates to: KLVAPRLKQMFGPHGVLDGGFPQ*LGQGTH
Trigger: GTGGGTCCCCTGCCCAAGGCACTGAGGGAAGCCGCC...GTCCAAAACACCATGTGGGCCAAACATTTGTTTGAGCCTGGGGGCCACCAGTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR TCA 90 bp TTGTGGCCTGCGGCGATGTTAGTTAGGCAAGCATGCTGGCTGCTTTTCAAGGTTCGCTGCCCACCTGGATaGAGTCTCCGCGGAAGGCCA +
Preference number: 4 (lower is better)
Translates to: LWPAAMLVRQACWLLFKVRCPPG*SLRGRP
Trigger: TGGCCTTCCGCGGAGACTTCATCCAGGTGGGCAGCG...AACCTTGAAAAGCAGCCAGCATGCTTGCCTAACTAACATCGCCGCAGGCCACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR GCA 90 bp TTGTGGCCTGCGGCGATGTTAGTTAGGCAAGCATGCTGGCTGCTTTTCAAGGTTGTTCACACCCCACAGTaGCTCCGCACGCAGGCCCTC +
Preference number: 4 (lower is better)
Translates to: LWPAAMLVRQACWLLFKVVHTPQ*LRTQAL
Trigger: GAGGGCCTGCGTGCGGAGGCACTGTGGGGTGTGAAC...AACCTTGAAAAGCAGCCAGCATGCTTGCCTAACTAACATCGCCGCAGGCCACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR GCA 90 bp GAAGGCTCCCAAGACTGGTCAGTGGGAGTTACCAAAGGGTGTCTCGCCACAAAAAGCTGGGGCAGCCTTTaGCACGTGGACAGCAACCGC +
Preference number: 4 (lower is better)
Translates to: EGSQDWSVGVTKGCLATKSWGSL*HVDSNR
Trigger: GCGGTTGCTGTCCACGTGGCAAAGGCTGCCCCAGCT...TTTTGTGGCGAGACACCCTTTGGTAACTCCCACTGACCAGTCTTGGGAGCCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR CCA 90 bp AAACTGGTGGCCCCCAGGCTCAAACAAATGTTTGGCCCACATGGTGTTTTGGACCAAGGGTGGCGGTGGTaGCGCCACAAGGAAGACCCC +
Preference number: 4 (lower is better)
Translates to: KLVAPRLKQMFGPHGVLDQGWRW*RHKEDP
Trigger: GGGGTCTTCCTTGTGGCGCCACCACCGCCACCCTTG...GTCCAAAACACCATGTGGGCCAAACATTTGTTTGAGCCTGGGGGCCACCAGTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR CCA 90 bp TTGTGGCCTGCGGCGATGTTAGTTAGGCAAGCATGCTGGCTGCTTTTCAAGGTTGGGCCCAGGACGCAGTaGAAGAGCGTATGGCGTCGC +
Preference number: 4 (lower is better)
Translates to: LWPAAMLVRQACWLLFKVGPRTQ*KSVWRR
Trigger: GCGACGCCATACGCTCTTCCACTGCGTCCTGGGCCC...AACCTTGAAAAGCAGCCAGCATGCTTGCCTAACTAACATCGCCGCAGGCCACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR GCA 90 bp TGTTTCCTAACCCAAACCTCTCTCACACCCTCACGCCATTTTCACTTCATTTCCGGCACACCAGGGCGGTaGACAGGCCGGTCACCAGGG +
Preference number: 4 (lower is better)
Translates to: CFLTQTSLTPSRHFHFISGTPGR*TGRSPG
Trigger: CCCTGGTGACCGGCCTGTGCACCGCCCTGGTGTGCC...GGAAATGAAGTGAAAATGGCGTGAGGGTGTGAGAGAGGTTTGGGTTAGGAAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR GCA 90 bp TGTTTCCTAACCCAAACCTCTCTCACACCCTCACGCCATTTTCACTTCATTTCCGCCCAGGGGCCCCCTTaGGCAGCAGCACTGCCAGCA +
Preference number: 4 (lower is better)
Translates to: CFLTQTSLTPSRHFHFISAQGPP*AAALPA
Trigger: TGCTGGCAGTGCTGCTGCGCAAGGGGGCCCCTGGGC...GGAAATGAAGTGAAAATGGCGTGAGGGTGTGAGAGAGGTTTGGGTTAGGAAACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR CCA 90 bp AAACTGGTGGCCCCCAGGCTCAAACAAATGTTTGGCCCACATGGTGTTTTGGACGCAGCCTTTGCCACGTaGACAGCAACCGCGCTGCTG +
Preference number: 4 (lower is better)
Translates to: KLVAPRLKQMFGPHGVLDAAFAT*TATALL
Trigger: CAGCAGCGCGGTTGCTGTCCACGTGGCAAAGGCTGC...GTCCAAAACACCATGTGGGCCAAACATTTGTTTGAGCCTGGGGGCCACCAGTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR GCA 90 bp GAAGGCTCCCAAGACTGGTCAGTGGGAGTTACCAAAGGGTGTCTCGCCACAAAACTTCTGCTCCTGGCGTaGTGTGTTCACACCCCACAG +
Preference number: 4 (lower is better)
Translates to: EGSQDWSVGVTKGCLATKLLLLA*CVHTPQ
Trigger: CTGTGGGGTGTGAACACAGCACGCCAGGAGCAGAAG...TTTTGTGGCGAGACACCCTTTGGTAACTCCCACTGACCAGTCTTGGGAGCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR GCA 90 bp TGTTTCCTAACCCAAACCTCTCTCACACCCTCACGCCATTTTCACTTCATTTCCCAAGGAAGCCCTGGGTaGGCTGACTCCGGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: CFLTQTSLTPSRHFHFISQGSPG*ADSGVG
Trigger: CCCCACCCCGGAGTCAGCGCACCCAGGGCTTCCTTG...GGAAATGAAGTGAAAATGGCGTGAGGGTGTGAGAGAGGTTTGGGTTAGGAAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR CCA 90 bp TTGTGGCCTGCGGCGATGTTAGTTAGGCAAGCATGCTGGCTGCTTTTCAAGGTTCGCTGCAGATGCGACTaGAACCAGCGCAGCACCAGA +
Preference number: 4 (lower is better)
Translates to: LWPAAMLVRQACWLLFKVRCRCD*NQRSTR
Trigger: TCTGGTGCTGCGCTGGTTCCAGTCGCATCTGCAGCG...AACCTTGAAAAGCAGCCAGCATGCTTGCCTAACTAACATCGCCGCAGGCCACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR CCA 90 bp AAACTGGTGGCCCCCAGGCTCAAACAAATGTTTGGCCCACATGGTGTTTTGGACCTGTTCCAGGCCACCTaGGGTCAAGGTGACCCGACA +
Preference number: 4 (lower is better)
Translates to: KLVAPRLKQMFGPHGVLDLFQAT*GQGDPT
Trigger: TGTCGGGTCACCTTGACCCCAGGTGGCCTGGAACAG...GTCCAAAACACCATGTGGGCCAAACATTTGTTTGAGCCTGGGGGCCACCAGTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR CCA 90 bp AAACTGGTGGCCCCCAGGCTCAAACAAATGTTTGGCCCACATGGTGTTTTGGACCAGTGGAAGAGCGTATaGCGTCGCAGCAGGCAGTCC +
Preference number: 4 (lower is better)
Translates to: KLVAPRLKQMFGPHGVLDQWKSV*RRSRQS
Trigger: GGACTGCCTGCTGCGACGCCATACGCTCTTCCACTG...GTCCAAAACACCATGTGGGCCAAACATTTGTTTGAGCCTGGGGGCCACCAGTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR CCA 90 bp AAACTGGTGGCCCCCAGGCTCAAACAAATGTTTGGCCCACATGGTGTTTTGGACAGCCTCCCGAGTATCTaGGATTACAGGCGCCCGCCA +
Preference number: 4 (lower is better)
Translates to: KLVAPRLKQMFGPHGVLDSLPSI*DYRRPP
Trigger: TGGCGGGCGCCTGTAATCCCAGATACTCGGGAGGCT...GTCCAAAACACCATGTGGGCCAAACATTTGTTTGAGCCTGGGGGCCACCAGTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR TCA 90 bp GAAGGCTCCCAAGACTGGTCAGTGGGAGTTACCAAAGGGTGTCTCGCCACAAAAGTTTCTACAGGCTGCTaGGTTTGCGACCCCTGGTTG +
Preference number: 4 (lower is better)
Translates to: EGSQDWSVGVTKGCLATKVSTGC*VCDPWL
Trigger: CAACCAGGGGTCGCAAACTCAGCAGCCTGTAGAAAC...TTTTGTGGCGAGACACCCTTTGGTAACTCCCACTGACCAGTCTTGGGAGCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR GCA 90 bp GTTTGCCCAGGACACTCTAGTGGGTGTGAAGATGTCATATTATACTGGACTGTGGGCTCACGTGCGCCTTaGTGTGGCCCAACACGTGCG +
Preference number: 4 (lower is better)
Translates to: VCPGHSSGCEDVILYWTVGSRAP*CGPTRA
Trigger: CGCACGTGTTGGGCCACAGCAAGGCGCACGTGAGCC...CACAGTCCAGTATAATATGACATCTTCACACCCACTAGAGTGTCCTGGGCAAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR GCA 90 bp TTGTGGCCTGCGGCGATGTTAGTTAGGCAAGCATGCTGGCTGCTTTTCAAGGTTCTTGCGCAGCAGCACTaGCAGCAGCACTGTCTTGAG +
Preference number: 4 (lower is better)
Translates to: LWPAAMLVRQACWLLFKVLAQQH*QQHCLE
Trigger: CTCAAGACAGTGCTGCTGGCAGTGCTGCTGCGCAAG...AACCTTGAAAAGCAGCCAGCATGCTTGCCTAACTAACATCGCCGCAGGCCACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR GCA 90 bp GTTTGCCCAGGACACTCTAGTGGGTGTGAAGATGTCATATTATACTGGACTGTGGGACAGCAACCGCGCTaGTGCAAGTTCCCGGGCGTG +
Preference number: 4 (lower is better)
Translates to: VCPGHSSGCEDVILYWTVGQQPR*CKFPGV
Trigger: CACGCCCGGGAACTTGCAGCAGCGCGGTTGCTGTCC...CACAGTCCAGTATAATATGACATCTTCACACCCACTAGAGTGTCCTGGGCAAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR GCA 90 bp CCCAGCTTGTGGCCTGCGGCGATGTTAGTTAGGCAAGCATGCTGGCTGCTTTTCCTGCAGCCGCCAGACTaGAACCAAAAACACAGTTTG +
Preference number: 4 (lower is better)
Translates to: PSLWPAAMLVRQACWLLFLQPPD*NQKHSL
Trigger: CAAACTGTGTTTTTGGTTGCAGTCTGGCGGCTGCAG...GAAAAGCAGCCAGCATGCTTGCCTAACTAACATCGCCGCAGGCCACAAGCTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR GCA 90 bp AAACTGGTGGCCCCCAGGCTCAAACAAATGTTTGGCCCACATGGTGTTTTGGACACAAAACCGACGCTATaGCTGCAGCCGCCAGACTGC +
Preference number: 4 (lower is better)
Translates to: KLVAPRLKQMFGPHGVLDTKPTL*LQPPDC
Trigger: GCAGTCTGGCGGCTGCAGGCATAGCGTCGGTTTTGT...GTCCAAAACACCATGTGGGCCAAACATTTGTTTGAGCCTGGGGGCCACCAGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR CCA 90 bp TTGTGGCCTGCGGCGATGTTAGTTAGGCAAGCATGCTGGCTGCTTTTCAAGGTTAGCAGCTTCTGCTCCTaGCGTGCTGTGTTCACACCC +
Preference number: 4 (lower is better)
Translates to: LWPAAMLVRQACWLLFKVSSFCS*RAVFTP
Trigger: GGGTGTGAACACAGCACGCCAGGAGCAGAAGCTGCT...AACCTTGAAAAGCAGCCAGCATGCTTGCCTAACTAACATCGCCGCAGGCCACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR CCA 90 bp CCCAGCTTGTGGCCTGCGGCGATGTTAGTTAGGCAAGCATGCTGGCTGCTTTTCGAAGGCTCCCAAGACTaGTCAGTGGGAGTTACCAAA +
Preference number: 4 (lower is better)
Translates to: PSLWPAAMLVRQACWLLFEGSQD*SVGVTK
Trigger: TTTGGTAACTCCCACTGACCAGTCTTGGGAGCCTTC...GAAAAGCAGCCAGCATGCTTGCCTAACTAACATCGCCGCAGGCCACAAGCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR TCA 90 bp CCTTCTGATTACTCATCTGCAAACTCCGACAGAGCAAAGAAGTTTACCCCAAATCACCTGGGGTCAAGGTaGCCCGACAGCGCCCCTCCA +
Preference number: 4 (lower is better)
Translates to: PSDYSSANSDRAKKFTPNHLGSR*PDSAPP
Trigger: TGGAGGGGCGCTGTCGGGTCACCTTGACCCCAGGTG...ATTTGGGGTAAACTTCTTTGCTCTGTCGGAGTTTGCAGATGAGTAATCAGAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR TCA 90 bp CCCAGCTTGTGGCCTGCGGCGATGTTAGTTAGGCAAGCATGCTGGCTGCTTTTCTTGCAAGACCTGTGCTaGATCAACAGGTCTCTTGGA +
Preference number: 4 (lower is better)
Translates to: PSLWPAAMLVRQACWLLFLQDLC*INRSLG
Trigger: TCCAAGAGACCTGTTGATTCAGCACAGGTCTTGCAA...GAAAAGCAGCCAGCATGCTTGCCTAACTAACATCGCCGCAGGCCACAAGCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR TCA 90 bp TTGTGGCCTGCGGCGATGTTAGTTAGGCAAGCATGCTGGCTGCTTTTCAAGGTTACGAATGGCAGGTCTTaGCTGTGGGGGCCATGGAAA +
Preference number: 4 (lower is better)
Translates to: LWPAAMLVRQACWLLFKVTNGRS*LWGPWK
Trigger: TTTCCATGGCCCCCACAGTCAAGACCTGCCATTCGT...AACCTTGAAAAGCAGCCAGCATGCTTGCCTAACTAACATCGCCGCAGGCCACAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR GCA 90 bp CCACATCCTTCTACAGAATCCGTCTACACAGAACAATATTTGAACCAATTCTTGTGTAGTGCACCGACATaGCGGGCGCCCGGGGCGGCG +
Preference number: 4 (lower is better)
Translates to: PHPSTESVYTEQYLNQFLCSAPT*RAPGAA
Trigger: CGCCGCCCCGGGCGCCCGGCATGTCGGTGCACTACA...CAAGAATTGGTTCAAATATTGTTCTGTGTAGACGGATTCTGTAGAAGGATGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR GCA 90 bp TTGTGGCCTGCGGCGATGTTAGTTAGGCAAGCATGCTGGCTGCTTTTCAAGGTTTTGGTCAGGTGGGGGTaGTGTCAGGGTTTACGGTTC +
Preference number: 4 (lower is better)
Translates to: LWPAAMLVRQACWLLFKVLVRWG*CQGLRF
Trigger: GAACCGTAAACCCTGACAGCACCCCCACCTGACCAA...AACCTTGAAAAGCAGCCAGCATGCTTGCCTAACTAACATCGCCGCAGGCCACAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR CCA 90 bp CCTTCTGATTACTCATCTGCAAACTCCGACAGAGCAAAGAAGTTTACCCCAAATCGCTGCCGGACAGCGTaGCGACAGCGCAGGAGGACA +
Preference number: 4 (lower is better)
Translates to: PSDYSSANSDRAKKFTPNRCRTA*RQRRRT
Trigger: TGTCCTCCTGCGCTGTCGCCACGCTGTCCGGCAGCG...ATTTGGGGTAAACTTCTTTGCTCTGTCGGAGTTTGCAGATGAGTAATCAGAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR CCA 90 bp TGTTTCCTAACCCAAACCTCTCTCACACCCTCACGCCATTTTCACTTCATTTCCACGTGCGCCTTGCTGTaGCCCAACACGTGCGGAGAC +
Preference number: 4 (lower is better)
Translates to: CFLTQTSLTPSRHFHFISTCALL*PNTCGD
Trigger: GTCTCCGCACGTGTTGGGCCACAGCAAGGCGCACGT...GGAAATGAAGTGAAAATGGCGTGAGGGTGTGAGAGAGGTTTGGGTTAGGAAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR CCA 90 bp CCTTCTGATTACTCATCTGCAAACTCCGACAGAGCAAAGAAGTTTACCCCAAATGCGCTGACTCCGGGGTaGGGGGCACCTGGCAAGGTA +
Preference number: 4 (lower is better)
Translates to: PSDYSSANSDRAKKFTPNALTPG*GAPGKV
Trigger: TACCTTGCCAGGTGCCCCCCACCCCGGAGTCAGCGC...ATTTGGGGTAAACTTCTTTGCTCTGTCGGAGTTTGCAGATGAGTAATCAGAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR CCA 90 bp TTGTGGCCTGCGGCGATGTTAGTTAGGCAAGCATGCTGGCTGCTTTTCAAGGTTGGCTTTAGGAGCATTTaGTCAGGTGGGGGTGCTGTC +
Preference number: 4 (lower is better)
Translates to: LWPAAMLVRQACWLLFKVGFRSI*SGGGAV
Trigger: GACAGCACCCCCACCTGACCAAATGCTCCTAAAGCC...AACCTTGAAAAGCAGCCAGCATGCTTGCCTAACTAACATCGCCGCAGGCCACAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR TCA 90 bp TTAACTGTCTTGGGCAACCATCATGCCTGGCTAATATGCCATATTATTTCCGTTGCTCCTCTCCGCGCCTaGCCCTGTTACTCGGACCCC +
Preference number: 4 (lower is better)
Translates to: LTVLGNHHAWLICHIISVAPLRA*PCYSDP
Trigger: GGGGTCCGAGTAACAGGGTCAGGCGCGGAGAGGAGC...AACGGAAATAATATGGCATATTAGCCAGGCATGATGGTTGCCCAAGACAGTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR TCA 90 bp CCACATCCTTCTACAGAATCCGTCTACACAGAACAATATTTGAACCAATTCTTGCGAGGCCCCCGATGGTaGGGGTGGTGCCTTGAGGGC +
Preference number: 4 (lower is better)
Translates to: PHPSTESVYTEQYLNQFLRGPRW*GWCLEG
Trigger: GCCCTCAAGGCACCACCCTCACCATCGGGGGCCTCG...CAAGAATTGGTTCAAATATTGTTCTGTGTAGACGGATTCTGTAGAAGGATGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR TCA 90 bp CCTTCTGATTACTCATCTGCAAACTCCGACAGAGCAAAGAAGTTTACCCCAAATAGAGTAGCAGAGAGGTaGCGCCGCCCGCGCACATCC +
Preference number: 4 (lower is better)
Translates to: PSDYSSANSDRAKKFTPNRVAER*RRPRTS
Trigger: GGATGTGCGCGGGCGGCGTCACCTCTCTGCTACTCT...ATTTGGGGTAAACTTCTTTGCTCTGTCGGAGTTTGCAGATGAGTAATCAGAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR GCA 90 bp CCACATCCTTCTACAGAATCCGTCTACACAGAACAATATTTGAACCAATTCTTGGACCCAAGCCCAGCATaGGCACAGCGCCCGGGCAGC +
Preference number: 4 (lower is better)
Translates to: PHPSTESVYTEQYLNQFLDPSPA*AQRPGS
Trigger: GCTGCCCGGGCGCTGTGCGCATGCTGGGCTTGGGTC...CAAGAATTGGTTCAAATATTGTTCTGTGTAGACGGATTCTGTAGAAGGATGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR GCA 90 bp CCCAGCTTGTGGCCTGCGGCGATGTTAGTTAGGCAAGCATGCTGGCTGCTTTTCGGCAAGCATGCTGGCTaGTTTTCAAGGTTGTACATT +
Preference number: 4 (lower is better)
Translates to: PSLWPAAMLVRQACWLLFGKHAG*FSRLYI
Trigger: AATGTACAACCTTGAAAAGCAGCCAGCATGCTTGCC...GAAAAGCAGCCAGCATGCTTGCCTAACTAACATCGCCGCAGGCCACAAGCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR GCA 90 bp AAACTGGTGGCCCCCAGGCTCAAACAAATGTTTGGCCCACATGGTGTTTTGGACCTGGGAGGAGGAGATTaGAGTGAGCCAAGATCATCC +
Preference number: 4 (lower is better)
Translates to: KLVAPRLKQMFGPHGVLDLGGGD*SEPRSS
Trigger: GGATGATCTTGGCTCACTGCAATCTCCTCCTCCCAG...GTCCAAAACACCATGTGGGCCAAACATTTGTTTGAGCCTGGGGGCCACCAGTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR CCA 90 bp TTAACTGTCTTGGGCAACCATCATGCCTGGCTAATATGCCATATTATTTCCGTTAGGATGCGTCCCCACTaGGTGGCGGCCGCTGAGTCC +
Preference number: 4 (lower is better)
Translates to: LTVLGNHHAWLICHIISVRMRPH*VAAAES
Trigger: GGACTCAGCGGCCGCCACCCAGTGGGGACGCATCCT...AACGGAAATAATATGGCATATTAGCCAGGCATGATGGTTGCCCAAGACAGTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR TCA 90 bp CCCAGCTTGTGGCCTGCGGCGATGTTAGTTAGGCAAGCATGCTGGCTGCTTTTCTTAATGAATGGATGTTaGCGGACAGGTACATATCCC +
Preference number: 4 (lower is better)
Translates to: PSLWPAAMLVRQACWLLFLMNGC*RTGTYP
Trigger: GGGATATGTACCTGTCCGTCAACATCCATTCATTAA...GAAAAGCAGCCAGCATGCTTGCCTAACTAACATCGCCGCAGGCCACAAGCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR TCA 90 bp GAAGGCTCCCAAGACTGGTCAGTGGGAGTTACCAAAGGGTGTCTCGCCACAAAATCGCCACAAAATGACTaGGTCATCTTCCCCAGAAAC +
Preference number: 4 (lower is better)
Translates to: EGSQDWSVGVTKGCLATKSPQND*VIFPRN
Trigger: GTTTCTGGGGAAGATGACTCAGTCATTTTGTGGCGA...TTTTGTGGCGAGACACCCTTTGGTAACTCCCACTGACCAGTCTTGGGAGCCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR CCA 90 bp CCCAGCTTGTGGCCTGCGGCGATGTTAGTTAGGCAAGCATGCTGGCTGCTTTTCGCTCAAACAAATGTTTaGCCCACATGGTGTTTTGGA +
Preference number: 4 (lower is better)
Translates to: PSLWPAAMLVRQACWLLFAQTNV*PTWCFG
Trigger: TCCAAAACACCATGTGGGCCAAACATTTGTTTGAGC...GAAAAGCAGCCAGCATGCTTGCCTAACTAACATCGCCGCAGGCCACAAGCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR CCA 90 bp TTGTGGCCTGCGGCGATGTTAGTTAGGCAAGCATGCTGGCTGCTTTTCAAGGTTGCAAGAGAAAACGAATaGCAGGTCTTGACTGTGGGG +
Preference number: 4 (lower is better)
Translates to: LWPAAMLVRQACWLLFKVARENE*QVLTVG
Trigger: CCCCACAGTCAAGACCTGCCATTCGTTTTCTCTTGC...AACCTTGAAAAGCAGCCAGCATGCTTGCCTAACTAACATCGCCGCAGGCCACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381440.5
3UTR CAA 72 bp TGGCAGCCACCAAATTTTCCAATGCCTTCTGCAATCTaGCATTTAACTGGCTTCACCGCCATTCCCACCCCC +
Preference number: 4 (lower is better)
Translates to: WQPPNFPMPSAI*HLTGFTAIPTP
Trigger: GGGGGTGGGAATGGCGGTGAAGCCAGTTAAATGCAAGATTGCAGAAGGCATTGGAAAATTTGGTGGCTGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR TCA 90 bp GTTTGCCCAGGACACTCTAGTGGGTGTGAAGATGTCATATTATACTGGACTGTGCGACCAGGGAGTAACTaGTCTTCAAGCACAGAGCCC +
Preference number: 4 (lower is better)
Translates to: VCPGHSSGCEDVILYWTVRPGSN*SSSTEP
Trigger: GGGCTCTGTGCTTGAAGATCAGTTACTCCCTGGTCG...CACAGTCCAGTATAATATGACATCTTCACACCCACTAGAGTGTCCTGGGCAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR TCA 90 bp CCACATCCTTCTACAGAATCCGTCTACACAGAACAATATTTGAACCAATTCTTGACTCCTGACCTCAGGTaGTCCGCCCACCTCGCCTCC +
Preference number: 4 (lower is better)
Translates to: PHPSTESVYTEQYLNQFLTPDLR*SAHLAS
Trigger: GGAGGCGAGGTGGGCGGATCACCTGAGGTCAGGAGT...CAAGAATTGGTTCAAATATTGTTCTGTGTAGACGGATTCTGTAGAAGGATGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR TCA 90 bp TTAACTGTCTTGGGCAACCATCATGCCTGGCTAATATGCCATATTATTTCCGTTGGCAGGAGGATCGCTTaGGCCCAGGAGGTCAAGGCT +
Preference number: 4 (lower is better)
Translates to: LTVLGNHHAWLICHIISVGRRIA*AQEVKA
Trigger: AGCCTTGACCTCCTGGGCTCAAGCGATCCTCCTGCC...AACGGAAATAATATGGCATATTAGCCAGGCATGATGGTTGCCCAAGACAGTTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR TCA 90 bp TTGTGGCCTGCGGCGATGTTAGTTAGGCAAGCATGCTGGCTGCTTTTCAAGGTTAGAAACATTCAGGGGTaGAGTCTGATCAGAACGACG +
Preference number: 4 (lower is better)
Translates to: LWPAAMLVRQACWLLFKVRNIQG*SLIRTT
Trigger: CGTCGTTCTGATCAGACTTCACCCCTGAATGTTTCT...AACCTTGAAAAGCAGCCAGCATGCTTGCCTAACTAACATCGCCGCAGGCCACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR GCA 90 bp GTTTGCCCAGGACACTCTAGTGGGTGTGAAGATGTCATATTATACTGGACTGTGCAACTCAGCAGCTTCTaGTCCTGGCGTGCTGTGTTC +
Preference number: 4 (lower is better)
Translates to: VCPGHSSGCEDVILYWTVQLSSF*SWRAVF
Trigger: GAACACAGCACGCCAGGAGCAGAAGCTGCTGAGTTG...CACAGTCCAGTATAATATGACATCTTCACACCCACTAGAGTGTCCTGGGCAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR GCA 90 bp ATTGTAGCAGCTGAACCATATCTGATTAACTCTTTGGTCTCTGTTATTGGAACAGCAAGTTCCCGGGCGTaGCCGTCGAAAGCGGCCAGG +
Preference number: 4 (lower is better)
Translates to: IVAAEPYLINSLVSVIGTASSRA*PSKAAR
Trigger: CCTGGCCGCTTTCGACGGGCACGCCCGGGAACTTGC...TGTTCCAATAACAGAGACCAAAGAGTTAATCAGATATGGTTCAGCTGCTACAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR GCA 90 bp AAACTGGTGGCCCCCAGGCTCAAACAAATGTTTGGCCCACATGGTGTTTTGGACAACACTTGGACTGGCTaGATTTCCAATCAGGCAAGC +
Preference number: 4 (lower is better)
Translates to: KLVAPRLKQMFGPHGVLDNTWTG*ISNQAS
Trigger: GCTTGCCTGATTGGAAATGCAGCCAGTCCAAGTGTT...GTCCAAAACACCATGTGGGCCAAACATTTGTTTGAGCCTGGGGGCCACCAGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR CCA 90 bp TTAACTGTCTTGGGCAACCATCATGCCTGGCTAATATGCCATATTATTTCCGTTGAGGTAGCAGGCACCTaGAGCTGCCCGTTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: LTVLGNHHAWLICHIISVEVAGT*SCPFLQ
Trigger: CTGCAGGAACGGGCAGCTCCAGGTGCCTGCTACCTC...AACGGAAATAATATGGCATATTAGCCAGGCATGATGGTTGCCCAAGACAGTTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR CCA 90 bp AAACTGGTGGCCCCCAGGCTCAAACAAATGTTTGGCCCACATGGTGTTTTGGACTTGGATGTCTTCCCATaGTTTGCCCAGGACACTCTA +
Preference number: 4 (lower is better)
Translates to: KLVAPRLKQMFGPHGVLDLDVFP*FAQDTL
Trigger: TAGAGTGTCCTGGGCAAACCATGGGAAGACATCCAA...GTCCAAAACACCATGTGGGCCAAACATTTGTTTGAGCCTGGGGGCCACCAGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR CCA 90 bp AAACTGGTGGCCCCCAGGCTCAAACAAATGTTTGGCCCACATGGTGTTTTGGACCCTTCCCCAGGTCTTTaGATTTCTCTTGGTTCACTC +
Preference number: 4 (lower is better)
Translates to: KLVAPRLKQMFGPHGVLDPSPGL*ISLGSL
Trigger: GAGTGAACCAAGAGAAATCCAAAGACCTGGGGAAGG...GTCCAAAACACCATGTGGGCCAAACATTTGTTTGAGCCTGGGGGCCACCAGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR CCA 90 bp GTTTGCCCAGGACACTCTAGTGGGTGTGAAGATGTCATATTATACTGGACTGTGGTGGTCGCAAACTGGTaGCCCCCAGGCTCAAACAAA +
Preference number: 4 (lower is better)
Translates to: VCPGHSSGCEDVILYWTVVVANW*PPGSNK
Trigger: TTTGTTTGAGCCTGGGGGCCACCAGTTTGCGACCAC...CACAGTCCAGTATAATATGACATCTTCACACCCACTAGAGTGTCCTGGGCAAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR CCA 90 bp TGTTTCCTAACCCAAACCTCTCTCACACCCTCACGCCATTTTCACTTCATTTCCAACTACGTAAGGCAGTaGTCGCAAACTGGTGGCCCC +
Preference number: 4 (lower is better)
Translates to: CFLTQTSLTPSRHFHFISNYVRQ*SQTGGP
Trigger: GGGGCCACCAGTTTGCGACCACTGCCTTACGTAGTT...GGAAATGAAGTGAAAATGGCGTGAGGGTGTGAGAGAGGTTTGGGTTAGGAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR TCA 90 bp CCACATCCTTCTACAGAATCCGTCTACACAGAACAATATTTGAACCAATTCTTGGTGAGGGTGGTGCCTTaGGGGCGCACAAGAAGCAGC +
Preference number: 4 (lower is better)
Translates to: PHPSTESVYTEQYLNQFLVRVVP*GRTRSS
Trigger: GCTGCTTCTTGTGCGCCCTCAAGGCACCACCCTCAC...CAAGAATTGGTTCAAATATTGTTCTGTGTAGACGGATTCTGTAGAAGGATGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR TCA 90 bp AAACTGGTGGCCCCCAGGCTCAAACAAATGTTTGGCCCACATGGTGTTTTGGACGTAAATCACTCACTATaGTTTCCCACAGCAGGCAAG +
Preference number: 4 (lower is better)
Translates to: KLVAPRLKQMFGPHGVLDVNHSL*FPTAGK
Trigger: CTTGCCTGCTGTGGGAAATCATAGTGAGTGATTTAC...GTCCAAAACACCATGTGGGCCAAACATTTGTTTGAGCCTGGGGGCCACCAGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR TCA 90 bp AAACTGGTGGCCCCCAGGCTCAAACAAATGTTTGGCCCACATGGTGTTTTGGACCCATGTAGACAGGGATaGGAAGTCAAAGTCTTCATC +
Preference number: 4 (lower is better)
Translates to: KLVAPRLKQMFGPHGVLDPCRQG*EVKVFI
Trigger: GATGAAGACTTTGACTTCTCATCCCTGTCTACATGG...GTCCAAAACACCATGTGGGCCAAACATTTGTTTGAGCCTGGGGGCCACCAGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR GCA 90 bp CCACATCCTTCTACAGAATCCGTCTACACAGAACAATATTTGAACCAATTCTTGCTAGCGGGGAGGAAATaGCGGAGTCTGGAGCCGAGC +
Preference number: 4 (lower is better)
Translates to: PHPSTESVYTEQYLNQFLLAGRK*RSLEPS
Trigger: GCTCGGCTCCAGACTCCGGCATTTCCTCCCCGCTAG...CAAGAATTGGTTCAAATATTGTTCTGTGTAGACGGATTCTGTAGAAGGATGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR GCA 90 bp ATTGTAGCAGCTGAACCATATCTGATTAACTCTTTGGTCTCTGTTATTGGAACAAGTGTTCCTTCCAGCTaGGGCCCGCCCTGCGCTCTC +
Preference number: 4 (lower is better)
Translates to: IVAAEPYLINSLVSVIGTSVPSS*GPPCAL
Trigger: GAGAGCGCAGGGCGGGCCGCAGCTGGAAGGAACACT...TGTTCCAATAACAGAGACCAAAGAGTTAATCAGATATGGTTCAGCTGCTACAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR GCA 90 bp CCTTCTGATTACTCATCTGCAAACTCCGACAGAGCAAAGAAGTTTACCCCAAATCCGGCTCCTCCCAGCTaGAAAATACACCCAACCTGG +
Preference number: 4 (lower is better)
Translates to: PSDYSSANSDRAKKFTPNPAPPS*KIHPTW
Trigger: CCAGGTTGGGTGTATTTTGCAGCTGGGAGGAGCCGG...ATTTGGGGTAAACTTCTTTGCTCTGTCGGAGTTTGCAGATGAGTAATCAGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR GCA 90 bp GAAGGCTCCCAAGACTGGTCAGTGGGAGTTACCAAAGGGTGTCTCGCCACAAAAAGACAGCACAACATTTaGAGCTGTTTCTCTTTCAGC +
Preference number: 4 (lower is better)
Translates to: EGSQDWSVGVTKGCLATKRQHNI*SCFSFS
Trigger: GCTGAAAGAGAAACAGCTGCAAATGTTGTGCTGTCT...TTTTGTGGCGAGACACCCTTTGGTAACTCCCACTGACCAGTCTTGGGAGCCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR GCA 90 bp GTTTGCCCAGGACACTCTAGTGGGTGTGAAGATGTCATATTATACTGGACTGTGAATGAGCTGCAATCTTaGCACTGCACTCCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: VCPGHSSGCEDVILYWTVNELQS*HCTPAW
Trigger: CCAGGCTGGAGTGCAGTGGCAAGATTGCAGCTCATT...CACAGTCCAGTATAATATGACATCTTCACACCCACTAGAGTGTCCTGGGCAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR CCA 90 bp CCTTCTGATTACTCATCTGCAAACTCCGACAGAGCAAAGAAGTTTACCCCAAATGGCTGTAACGCACAGTaGCCAAGGAGCGCTGCAGAT +
Preference number: 4 (lower is better)
Translates to: PSDYSSANSDRAKKFTPNGCNAQ*PRSAAD
Trigger: ATCTGCAGCGCTCCTTGGCCACTGTGCGTTACAGCC...ATTTGGGGTAAACTTCTTTGCTCTGTCGGAGTTTGCAGATGAGTAATCAGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR CCA 90 bp ATTGTAGCAGCTGAACCATATCTGATTAACTCTTTGGTCTCTGTTATTGGAACAGGGCAAGGGTGGCGGTaGTGGCGCCACAAGGAAGAC +
Preference number: 4 (lower is better)
Translates to: IVAAEPYLINSLVSVIGTGQGWR*WRHKED
Trigger: GTCTTCCTTGTGGCGCCACCACCGCCACCCTTGCCC...TGTTCCAATAACAGAGACCAAAGAGTTAATCAGATATGGTTCAGCTGCTACAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR CCA 90 bp ATTGTAGCAGCTGAACCATATCTGATTAACTCTTTGGTCTCTGTTATTGGAACACTTCCCTCAGTGCCTTaGGCAGGGGACCCACCTCGG +
Preference number: 4 (lower is better)
Translates to: IVAAEPYLINSLVSVIGTLPSVP*AGDPPR
Trigger: CCGAGGTGGGTCCCCTGCCCAAGGCACTGAGGGAAG...TGTTCCAATAACAGAGACCAAAGAGTTAATCAGATATGGTTCAGCTGCTACAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR CCA 90 bp AAACTGGTGGCCCCCAGGCTCAAACAAATGTTTGGCCCACATGGTGTTTTGGACAATCTTGCATTTAACTaGCTTCACCGCCATTCCCAC +
Preference number: 4 (lower is better)
Translates to: KLVAPRLKQMFGPHGVLDNLAFN*LHRHSH
Trigger: GTGGGAATGGCGGTGAAGCCAGTTAAATGCAAGATT...GTCCAAAACACCATGTGGGCCAAACATTTGTTTGAGCCTGGGGGCCACCAGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR CCA 90 bp CCCAGCTTGTGGCCTGCGGCGATGTTAGTTAGGCAAGCATGCTGGCTGCTTTTCTCTTTGGATTTCTCTTaGTTCACTCGAATTCTCCTT +
Preference number: 4 (lower is better)
Translates to: PSLWPAAMLVRQACWLLFSLDFS*FTRILL
Trigger: AAGGAGAATTCGAGTGAACCAAGAGAAATCCAAAGA...GAAAAGCAGCCAGCATGCTTGCCTAACTAACATCGCCGCAGGCCACAAGCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381440.5
3UTR CAA 72 bp ATGTTTTGCAAGACCTGTGCTGAATCAACAGGTCTCTaGGACCACGTAAGACTGCCTGGACAAGGAAGAACC +
Preference number: 4 (lower is better)
Translates to: MFCKTCAESTGL*DHVRLPGQGRT
Trigger: GGTTCTTCCTTGTCCAGGCAGTCTTACGTGGTCCAAGAGACCTGTTGATTCAGCACAGGTCTTGCAAAACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR TCA 90 bp ATTGTAGCAGCTGAACCATATCTGATTAACTCTTTGGTCTCTGTTATTGGAACATCTCCAGCAGGATGCTaGGGCCCGGCTCTCGGAAGT +
Preference number: 4 (lower is better)
Translates to: IVAAEPYLINSLVSVIGTSPAGC*GPALGS
Trigger: ACTTCCGAGAGCCGGGCCTCAGCATCCTGCTGGAGA...TGTTCCAATAACAGAGACCAAAGAGTTAATCAGATATGGTTCAGCTGCTACAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR TCA 90 bp GTTTGCCCAGGACACTCTAGTGGGTGTGAAGATGTCATATTATACTGGACTGTGCCAGCAGCACTGTCTTaGGCACATATGAGGATAGGA +
Preference number: 4 (lower is better)
Translates to: VCPGHSSGCEDVILYWTVPAALS*AHMRIG
Trigger: TCCTATCCTCATATGTGCTCAAGACAGTGCTGCTGG...CACAGTCCAGTATAATATGACATCTTCACACCCACTAGAGTGTCCTGGGCAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR TCA 90 bp TGTTTCCTAACCCAAACCTCTCTCACACCCTCACGCCATTTTCACTTCATTTCCTGTCTCGCCACAAAATaGCTGAGTCATCTTCCCCAG +
Preference number: 4 (lower is better)
Translates to: CFLTQTSLTPSRHFHFISCLATK*LSHLPQ
Trigger: CTGGGGAAGATGACTCAGTCATTTTGTGGCGAGACA...GGAAATGAAGTGAAAATGGCGTGAGGGTGTGAGAGAGGTTTGGGTTAGGAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR TCA 90 bp CCTTCTGATTACTCATCTGCAAACTCCGACAGAGCAAAGAAGTTTACCCCAAATAGGAGGAGATTGCAGTaGGCCAAGATCATCCCACCG +
Preference number: 4 (lower is better)
Translates to: PSDYSSANSDRAKKFTPNRRRLQ*AKIIPP
Trigger: CGGTGGGATGATCTTGGCTCACTGCAATCTCCTCCT...ATTTGGGGTAAACTTCTTTGCTCTGTCGGAGTTTGCAGATGAGTAATCAGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR TCA 90 bp AAACTGGTGGCCCCCAGGCTCAAACAAATGTTTGGCCCACATGGTGTTTTGGACCAGCTGAACCATATCTaGTTAACTCTTTGGTCTCTG +
Preference number: 4 (lower is better)
Translates to: KLVAPRLKQMFGPHGVLDQLNHI*LTLWSL
Trigger: CAGAGACCAAAGAGTTAATCAGATATGGTTCAGCTG...GTCCAAAACACCATGTGGGCCAAACATTTGTTTGAGCCTGGGGGCCACCAGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR GCA 90 bp ATTGTAGCAGCTGAACCATATCTGATTAACTCTTTGGTCTCTGTTATTGGAACAGCAGGCACCTGGAGCTaGCCGTTCCTGCAGCCAACT +
Preference number: 4 (lower is better)
Translates to: IVAAEPYLINSLVSVIGTAGTWS*PFLQPT
Trigger: AGTTGGCTGCAGGAACGGGCAGCTCCAGGTGCCTGC...TGTTCCAATAACAGAGACCAAAGAGTTAATCAGATATGGTTCAGCTGCTACAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR GCA 90 bp GAAGGCTCCCAAGACTGGTCAGTGGGAGTTACCAAAGGGTGTCTCGCCACAAAACCACATGATTCAAAGTaGAAATTTACTCCAACCTGC +
Preference number: 4 (lower is better)
Translates to: EGSQDWSVGVTKGCLATKPHDSK*KFTPTC
Trigger: GCAGGTTGGAGTAAATTTGCACTTTGAATCATGTGG...TTTTGTGGCGAGACACCCTTTGGTAACTCCCACTGACCAGTCTTGGGAGCCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR CCA 90 bp TTGTGGCCTGCGGCGATGTTAGTTAGGCAAGCATGCTGGCTGCTTTTCAAGGTTAGGAAGAACCATCAATaGTTAGAGACCCAGCACAAA +
Preference number: 4 (lower is better)
Translates to: LWPAAMLVRQACWLLFKVRKNHQ*LETQHK
Trigger: TTTGTGCTGGGTCTCTAACCATTGATGGTTCTTCCT...AACCTTGAAAAGCAGCCAGCATGCTTGCCTAACTAACATCGCCGCAGGCCACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR TCA 90 bp TTGTGGCCTGCGGCGATGTTAGTTAGGCAAGCATGCTGGCTGCTTTTCAAGGTTATTCTGCAATCCTTCTaGTTACTCATCTGCAAACTC +
Preference number: 4 (lower is better)
Translates to: LWPAAMLVRQACWLLFKVILQSF*LLICKL
Trigger: GAGTTTGCAGATGAGTAATCAGAAGGATTGCAGAAT...AACCTTGAAAAGCAGCCAGCATGCTTGCCTAACTAACATCGCCGCAGGCCACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR GCA 90 bp ATTGTAGCAGCTGAACCATATCTGATTAACTCTTTGGTCTCTGTTATTGGAACAAAGGAGCGCTGCAGATaGGACTGGAACCAGCGCAGC +
Preference number: 4 (lower is better)
Translates to: IVAAEPYLINSLVSVIGTKERCR*DWNQRS
Trigger: GCTGCGCTGGTTCCAGTCGCATCTGCAGCGCTCCTT...TGTTCCAATAACAGAGACCAAAGAGTTAATCAGATATGGTTCAGCTGCTACAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR GCA 90 bp AAACTGGTGGCCCCCAGGCTCAAACAAATGTTTGGCCCACATGGTGTTTTGGACAGCCAACATGTTTTATaGCTTCACCAGTGTTGTCTT +
Preference number: 4 (lower is better)
Translates to: KLVAPRLKQMFGPHGVLDSQHVL*LHQCCL
Trigger: AAGACAACACTGGTGAAGGCATAAAACATGTTGGCT...GTCCAAAACACCATGTGGGCCAAACATTTGTTTGAGCCTGGGGGCCACCAGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR GCA 90 bp TTAACTGTCTTGGGCAACCATCATGCCTGGCTAATATGCCATATTATTTCCGTTTGTCTTCCCATGGTTTaGCCAGGACACTCTAGTGGG +
Preference number: 4 (lower is better)
Translates to: LTVLGNHHAWLICHIISVCLPMV*PGHSSG
Trigger: CCCACTAGAGTGTCCTGGGCAAACCATGGGAAGACA...AACGGAAATAATATGGCATATTAGCCAGGCATGATGGTTGCCCAAGACAGTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR GCA 90 bp TTAACTGTCTTGGGCAACCATCATGCCTGGCTAATATGCCATATTATTTCCGTTAGAAAAGAGACAGACTaGCGTCAAGGGCTGTCTCCC +
Preference number: 4 (lower is better)
Translates to: LTVLGNHHAWLICHIISVRKETD*RQGLSP
Trigger: GGGAGACAGCCCTTGACGGCAGTCTGTCTCTTTTCT...AACGGAAATAATATGGCATATTAGCCAGGCATGATGGTTGCCCAAGACAGTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR GCA 90 bp GTTTGCCCAGGACACTCTAGTGGGTGTGAAGATGTCATATTATACTGGACTGTGCTTGGGCAACCATCATaGCTGGCTAATATGCCATAT +
Preference number: 4 (lower is better)
Translates to: VCPGHSSGCEDVILYWTVLGQPS*LANMPY
Trigger: ATATGGCATATTAGCCAGGCATGATGGTTGCCCAAG...CACAGTCCAGTATAATATGACATCTTCACACCCACTAGAGTGTCCTGGGCAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR CCA 90 bp GTTTGCCCAGGACACTCTAGTGGGTGTGAAGATGTCATATTATACTGGACTGTGGGTTCCAGACATCTCTaGCTGGTAGTAGGTAGTTTA +
Preference number: 4 (lower is better)
Translates to: VCPGHSSGCEDVILYWTVGSRHL*LVVGSL
Trigger: TAAACTACCTACTACCAGCCAGAGATGTCTGGAACC...CACAGTCCAGTATAATATGACATCTTCACACCCACTAGAGTGTCCTGGGCAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR CCA 90 bp GAAGGCTCCCAAGACTGGTCAGTGGGAGTTACCAAAGGGTGTCTCGCCACAAAAACCAAAAACACAGTTTaGGGTCAGAAGACATTAAAA +
Preference number: 4 (lower is better)
Translates to: EGSQDWSVGVTKGCLATKTKNTV*GQKTLK
Trigger: TTTTAATGTCTTCTGACCCCAAACTGTGTTTTTGGT...TTTTGTGGCGAGACACCCTTTGGTAACTCCCACTGACCAGTCTTGGGAGCCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR TCA 90 bp GTTTGCCCAGGACACTCTAGTGGGTGTGAAGATGTCATATTATACTGGACTGTGCTTATGACCCAACATTaGCCTCAAAAGCTAGGAATG +
Preference number: 4 (lower is better)
Translates to: VCPGHSSGCEDVILYWTVLMTQH*PQKLGM
Trigger: CATTCCTAGCTTTTGAGGTCAATGTTGGGTCATAAG...CACAGTCCAGTATAATATGACATCTTCACACCCACTAGAGTGTCCTGGGCAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR TCA 90 bp TGTTTCCTAACCCAAACCTCTCTCACACCCTCACGCCATTTTCACTTCATTTCCCACTGTAGTAAACAATaGGTACAGAGGAAGTTGTGG +
Preference number: 4 (lower is better)
Translates to: CFLTQTSLTPSRHFHFISHCSKQ*VQRKLW
Trigger: CCACAACTTCCTCTGTACTCATTGTTTACTACAGTG...GGAAATGAAGTGAAAATGGCGTGAGGGTGTGAGAGAGGTTTGGGTTAGGAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR TCA 90 bp CCACATCCTTCTACAGAATCCGTCTACACAGAACAATATTTGAACCAATTCTTGGGCCCAAGAATCACTTaGACCTGGGAGGAGGAGATT +
Preference number: 4 (lower is better)
Translates to: PHPSTESVYTEQYLNQFLGPRIT*TWEEEI
Trigger: AATCTCCTCCTCCCAGGTTCAAGTGATTCTTGGGCC...CAAGAATTGGTTCAAATATTGTTCTGTGTAGACGGATTCTGTAGAAGGATGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR GCA 90 bp ATTGTAGCAGCTGAACCATATCTGATTAACTCTTTGGTCTCTGTTATTGGAACACATCAGCAAAGGGTTTaGAGTCCCGAAGCCAGTGGC +
Preference number: 4 (lower is better)
Translates to: IVAAEPYLINSLVSVIGTHQQRV*SPEASG
Trigger: GCCACTGGCTTCGGGACTGCAAACCCTTTGCTGATG...TGTTCCAATAACAGAGACCAAAGAGTTAATCAGATATGGTTCAGCTGCTACAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR GCA 90 bp ATTGTAGCAGCTGAACCATATCTGATTAACTCTTTGGTCTCTGTTATTGGAACAAGCAGCCGTAGTCAGTaGGGCAGGGCAAGATGTGTA +
Preference number: 4 (lower is better)
Translates to: IVAAEPYLINSLVSVIGTSSRSQ*GRARCV
Trigger: TACACATCTTGCCCTGCCGCACTGACTACGGCTGCT...TGTTCCAATAACAGAGACCAAAGAGTTAATCAGATATGGTTCAGCTGCTACAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR GCA 90 bp AAACTGGTGGCCCCCAGGCTCAAACAAATGTTTGGCCCACATGGTGTTTTGGACTGTACAGAGAACAATTaGTCAGCATGGCATTTAAAT +
Preference number: 4 (lower is better)
Translates to: KLVAPRLKQMFGPHGVLDCTENN*SAWHLN
Trigger: ATTTAAATGCCATGCTGAGCAATTGTTCTCTGTACA...GTCCAAAACACCATGTGGGCCAAACATTTGTTTGAGCCTGGGGGCCACCAGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR CCA 90 bp CCACATCCTTCTACAGAATCCGTCTACACAGAACAATATTTGAACCAATTCTTGGAGCATTTGGTCAGGTaGGGGTGCTGTCAGGGTTTA +
Preference number: 4 (lower is better)
Translates to: PHPSTESVYTEQYLNQFLEHLVR*GCCQGL
Trigger: TAAACCCTGACAGCACCCCCACCTGACCAAATGCTC...CAAGAATTGGTTCAAATATTGTTCTGTGTAGACGGATTCTGTAGAAGGATGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR CCA 90 bp ATTGTAGCAGCTGAACCATATCTGATTAACTCTTTGGTCTCTGTTATTGGAACAGCCAGCAGCCAGCCTTaGAGAAACACCTTTACAGGC +
Preference number: 4 (lower is better)
Translates to: IVAAEPYLINSLVSVIGTASSQP*RNTFTG
Trigger: GCCTGTAAAGGTGTTTCTCCAAGGCTGGCTGCTGGC...TGTTCCAATAACAGAGACCAAAGAGTTAATCAGATATGGTTCAGCTGCTACAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR CCA 90 bp TTGTGGCCTGCGGCGATGTTAGTTAGGCAAGCATGCTGGCTGCTTTTCAAGGTTGAAATCTCTAAGTTTTaGTTACCATGTACAGAGAAC +
Preference number: 4 (lower is better)
Translates to: LWPAAMLVRQACWLLFKVEISKF*LPCTEN
Trigger: GTTCTCTGTACATGGTAACCAAAACTTAGAGATTTC...AACCTTGAAAAGCAGCCAGCATGCTTGCCTAACTAACATCGCCGCAGGCCACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR CCA 90 bp CCACATCCTTCTACAGAATCCGTCTACACAGAACAATATTTGAACCAATTCTTGCCCAAGACTGGTCAGTaGGAGTTACCAAAGGGTGTC +
Preference number: 4 (lower is better)
Translates to: PHPSTESVYTEQYLNQFLPKTGQ*ELPKGV
Trigger: GACACCCTTTGGTAACTCCCACTGACCAGTCTTGGG...CAAGAATTGGTTCAAATATTGTTCTGTGTAGACGGATTCTGTAGAAGGATGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381440.5
3UTR CAA 72 bp ACAGAACAATATTTGAACCAATTCTTGGGTCTCCTGTaGGATGTCTTCCCATGGTTTGCCCAGGACACTCTA +
Preference number: 4 (lower is better)
Translates to: TEQYLNQFLGLL*DVFPWFAQDTL
Trigger: TAGAGTGTCCTGGGCAAACCATGGGAAGACATCCAACAGGAGACCCAAGAATTGGTTCAAATATTGTTCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381440.5
3UTR CAA 72 bp GAATCCGTCTACACAGAACAATATTTGAACCAATTCTaGGGTCTCCTGTTGGATGTCTTCCCATGGTTTGCC +
Preference number: 4 (lower is better)
Translates to: ESVYTEQYLNQF*GLLLDVFPWFA
Trigger: GGCAAACCATGGGAAGACATCCAACAGGAGACCCAAGAATTGGTTCAAATATTGTTCTGTGTAGACGGATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR TCA 90 bp ATTGTAGCAGCTGAACCATATCTGATTAACTCTTTGGTCTCTGTTATTGGAACAAGAAGACGCGTAGATTaGGGGTGTAGTGCACCGACA +
Preference number: 4 (lower is better)
Translates to: IVAAEPYLINSLVSVIGTRRRVD*GCSAPT
Trigger: TGTCGGTGCACTACACCCTCAATCTACGCGTCTTCT...TGTTCCAATAACAGAGACCAAAGAGTTAATCAGATATGGTTCAGCTGCTACAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR TCA 90 bp TGTTTCCTAACCCAAACCTCTCTCACACCCTCACGCCATTTTCACTTCATTTCCGCCTTTCCATCTATGTaGCTTAACTTGTTGACAATC +
Preference number: 4 (lower is better)
Translates to: CFLTQTSLTPSRHFHFISAFPSM*LNLLTI
Trigger: GATTGTCAACAAGTTAAGTCACATAGATGGAAAGGC...GGAAATGAAGTGAAAATGGCGTGAGGGTGTGAGAGAGGTTTGGGTTAGGAAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR TCA 90 bp TGTTTCCTAACCCAAACCTCTCTCACACCCTCACGCCATTTTCACTTCATTTCCTGTGTTCTTGGTAGTTaGAATGGTATGAGCCTAAGA +
Preference number: 4 (lower is better)
Translates to: CFLTQTSLTPSRHFHFISCVLGS*NGMSLR
Trigger: TCTTAGGCTCATACCATTTCAACTACCAAGAACACA...GGAAATGAAGTGAAAATGGCGTGAGGGTGTGAGAGAGGTTTGGGTTAGGAAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR GCA 90 bp ATTGTAGCAGCTGAACCATATCTGATTAACTCTTTGGTCTCTGTTATTGGAACAGCTAGGAATGACCTTTaGGGGGAACTGTCCCCAAGA +
Preference number: 4 (lower is better)
Translates to: IVAAEPYLINSLVSVIGTARNDL*GELSPR
Trigger: TCTTGGGGACAGTTCCCCGCAAAGGTCATTCCTAGC...TGTTCCAATAACAGAGACCAAAGAGTTAATCAGATATGGTTCAGCTGCTACAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR GCA 90 bp ATTGTAGCAGCTGAACCATATCTGATTAACTCTTTGGTCTCTGTTATTGGAACACCAGGAGGTCAAGGCTaGAATGAGCTGCAATCTTGC +
Preference number: 4 (lower is better)
Translates to: IVAAEPYLINSLVSVIGTPGGQG*NELQSC
Trigger: GCAAGATTGCAGCTCATTGCAGCCTTGACCTCCTGG...TGTTCCAATAACAGAGACCAAAGAGTTAATCAGATATGGTTCAGCTGCTACAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR CCA 90 bp GTTTGCCCAGGACACTCTAGTGGGTGTGAAGATGTCATATTATACTGGACTGTGGATGTCATATTATACTaGACTGTGAAGCGAGAAGGT +
Preference number: 4 (lower is better)
Translates to: VCPGHSSGCEDVILYWTVDVILY*TVKREG
Trigger: ACCTTCTCGCTTCACAGTCCAGTATAATATGACATC...CACAGTCCAGTATAATATGACATCTTCACACCCACTAGAGTGTCCTGGGCAAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR CCA 90 bp CCACATCCTTCTACAGAATCCGTCTACACAGAACAATATTTGAACCAATTCTTGACATATCCCAGCTTGTaGCCTGCGGCGATGTTAGTT +
Preference number: 4 (lower is better)
Translates to: PHPSTESVYTEQYLNQFLTYPSL*PAAMLV
Trigger: AACTAACATCGCCGCAGGCCACAAGCTGGGATATGT...CAAGAATTGGTTCAAATATTGTTCTGTGTAGACGGATTCTGTAGAAGGATGTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR CCA 90 bp GTTTGCCCAGGACACTCTAGTGGGTGTGAAGATGTCATATTATACTGGACTGTGTTTGGTCTCTGTTATTaGAACAAAACCGACGCTATG +
Preference number: 4 (lower is better)
Translates to: VCPGHSSGCEDVILYWTVFGLCY*NKTDAM
Trigger: CATAGCGTCGGTTTTGTTCCAATAACAGAGACCAAA...CACAGTCCAGTATAATATGACATCTTCACACCCACTAGAGTGTCCTGGGCAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381440.5
3UTR CAA 72 bp CTTCACTTTCATCTTAAGTCCTCCTTCCCCAGGTCTTaGGATTTCTCTTGGTTCACTCGAATTCTCCTTTCT +
Preference number: 4 (lower is better)
Translates to: LHFHLKSSFPRS*DFSWFTRILLS
Trigger: AGAAAGGAGAATTCGAGTGAACCAAGAGAAATCCAAAGACCTGGGGAAGGAGGACTTAAGATGAAAGTGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR TCA 90 bp TGTTTCCTAACCCAAACCTCTCTCACACCCTCACGCCATTTTCACTTCATTTCCTCACCAGTGTTGTCTTaGATATGTATTTGGTTGCTA +
Preference number: 4 (lower is better)
Translates to: CFLTQTSLTPSRHFHFISSPVLS*ICIWLL
Trigger: TAGCAACCAAATACATATTCAAGACAACACTGGTGA...GGAAATGAAGTGAAAATGGCGTGAGGGTGTGAGAGAGGTTTGGGTTAGGAAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR TCA 90 bp GTTTGCCCAGGACACTCTAGTGGGTGTGAAGATGTCATATTATACTGGACTGTGCAGAGCCCAAGATACTaGACTATAAGTGAAATGTTT +
Preference number: 4 (lower is better)
Translates to: VCPGHSSGCEDVILYWTVQSPRY*TISEMF
Trigger: AAACATTTCACTTATAGTTCAGTATCTTGGGCTCTG...CACAGTCCAGTATAATATGACATCTTCACACCCACTAGAGTGTCCTGGGCAAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR TCA 90 bp ATTGTAGCAGCTGAACCATATCTGATTAACTCTTTGGTCTCTGTTATTGGAACAAATCAGGCAAGCAGATaGGGGGCCATGCTGAACTTA +
Preference number: 4 (lower is better)
Translates to: IVAAEPYLINSLVSVIGTNQASR*GAMLNL
Trigger: TAAGTTCAGCATGGCCCCTCATCTGCTTGCCTGATT...TGTTCCAATAACAGAGACCAAAGAGTTAATCAGATATGGTTCAGCTGCTACAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR GCA 90 bp TGTTTCCTAACCCAAACCTCTCTCACACCCTCACGCCATTTTCACTTCATTTCCCATGCCTGGCTAATATaGCATATTATTTCCGTTGTA +
Preference number: 4 (lower is better)
Translates to: CFLTQTSLTPSRHFHFISHAWLI*HIISVV
Trigger: TACAACGGAAATAATATGGCATATTAGCCAGGCATG...GGAAATGAAGTGAAAATGGCGTGAGGGTGTGAGAGAGGTTTGGGTTAGGAAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR CCA 90 bp TTAACTGTCTTGGGCAACCATCATGCCTGGCTAATATGCCATATTATTTCCGTTGTTAGGCAAGCATGCTaGCTGCTTTTCAAGGTTGTA +
Preference number: 4 (lower is better)
Translates to: LTVLGNHHAWLICHIISVVRQAC*LLFKVV
Trigger: TACAACCTTGAAAAGCAGCCAGCATGCTTGCCTAAC...AACGGAAATAATATGGCATATTAGCCAGGCATGATGGTTGCCCAAGACAGTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381440.5
3UTR CAA 72 bp AAGCAGATGAGGGGCCATGCTGAACTTAAACTGCAATaGAGGACTGTTATAAATTTGGGAGAACAAGGAAGA +
Preference number: 4 (lower is better)
Translates to: KQMRGHAELKLQ*RTVINLGEQGR
Trigger: TCTTCCTTGTTCTCCCAAATTTATAACAGTCCTCAATTGCAGTTTAAGTTCAGCATGGCCCCTCATCTGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR TCA 90 bp CCACATCCTTCTACAGAATCCGTCTACACAGAACAATATTTGAACCAATTCTTGTCCTCCTGGGAACTGTaGGTTAAGTGTTATCTATGG +
Preference number: 4 (lower is better)
Translates to: PHPSTESVYTEQYLNQFLSSWEL*VKCYLW
Trigger: CCATAGATAACACTTAACTCACAGTTCCCAGGAGGA...CAAGAATTGGTTCAAATATTGTTCTGTGTAGACGGATTCTGTAGAAGGATGTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR CCA 90 bp ATTGTAGCAGCTGAACCATATCTGATTAACTCTTTGGTCTCTGTTATTGGAACACCACGTAAGACTGCCTaGACAAGGAAGAACCATCAA +
Preference number: 4 (lower is better)
Translates to: IVAAEPYLINSLVSVIGTPRKTA*TRKNHQ
Trigger: TTGATGGTTCTTCCTTGTCCAGGCAGTCTTACGTGG...TGTTCCAATAACAGAGACCAAAGAGTTAATCAGATATGGTTCAGCTGCTACAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR CCA 90 bp ATTGTAGCAGCTGAACCATATCTGATTAACTCTTTGGTCTCTGTTATTGGAACAGAAGCCAATGCAGCTTaGAGGAGAAGGATTCCTGTA +
Preference number: 4 (lower is better)
Translates to: IVAAEPYLINSLVSVIGTEANAA*RRRIPV
Trigger: TACAGGAATCCTTCTCCTCCAAGCTGCATTGGCTTC...TGTTCCAATAACAGAGACCAAAGAGTTAATCAGATATGGTTCAGCTGCTACAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR CCA 90 bp CCTTCTGATTACTCATCTGCAAACTCCGACAGAGCAAAGAAGTTTACCCCAAATGGATGGATGAGGCTTTaGGTAATTAACCTGAAAAAC +
Preference number: 4 (lower is better)
Translates to: PSDYSSANSDRAKKFTPNGWMRL*VINLKN
Trigger: GTTTTTCAGGTTAATTACCCAAAGCCTCATCCATCC...ATTTGGGGTAAACTTCTTTGCTCTGTCGGAGTTTGCAGATGAGTAATCAGAAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR TCA 90 bp CCACATCCTTCTACAGAATCCGTCTACACAGAACAATATTTGAACCAATTCTTGCAATGCAGTACCTTATaGCCCAACATTGACCTCAAA +
Preference number: 4 (lower is better)
Translates to: PHPSTESVYTEQYLNQFLQCSTL*PNIDLK
Trigger: TTTGAGGTCAATGTTGGGTCATAAGGTACTGCATTG...CAAGAATTGGTTCAAATATTGTTCTGTGTAGACGGATTCTGTAGAAGGATGTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR TCA 90 bp TTAACTGTCTTGGGCAACCATCATGCCTGGCTAATATGCCATATTATTTCCGTTATAAAGTTAGCAGACTaGCTTCTTTGCACAATGCAG +
Preference number: 4 (lower is better)
Translates to: LTVLGNHHAWLICHIISVIKLAD*LLCTMQ
Trigger: CTGCATTGTGCAAAGAAGTCAGTCTGCTAACTTTAT...AACGGAAATAATATGGCATATTAGCCAGGCATGATGGTTGCCCAAGACAGTTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR TCA 90 bp CCTTCTGATTACTCATCTGCAAACTCCGACAGAGCAAAGAAGTTTACCCCAAATAACTTGTTTCCCTCTTaGAGGACATTGGAAATGTTA +
Preference number: 4 (lower is better)
Translates to: PSDYSSANSDRAKKFTPNNLFPS*RTLEML
Trigger: TAACATTTCCAATGTCCTTCAAGAGGGAAACAAGTT...ATTTGGGGTAAACTTCTTTGCTCTGTCGGAGTTTGCAGATGAGTAATCAGAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR GCA 90 bp ATTGTAGCAGCTGAACCATATCTGATTAACTCTTTGGTCTCTGTTATTGGAACACCTGCAGCTAGTTCTTaGTTCTTCTACTGGACTTCT +
Preference number: 4 (lower is better)
Translates to: IVAAEPYLINSLVSVIGTPAASS*FFYWTS
Trigger: AGAAGTCCAGTAGAAGAAGCAAGAACTAGCTGCAGG...TGTTCCAATAACAGAGACCAAAGAGTTAATCAGATATGGTTCAGCTGCTACAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR CCA 90 bp CCACATCCTTCTACAGAATCCGTCTACACAGAACAATATTTGAACCAATTCTTGAAAACTGGCCCTAAGTaGTTTGATGTAGGATCTGAC +
Preference number: 4 (lower is better)
Translates to: PHPSTESVYTEQYLNQFLKTGPK*FDVGSD
Trigger: GTCAGATCCTACATCAAACCACTTAGGGCCAGTTTT...CAAGAATTGGTTCAAATATTGTTCTGTGTAGACGGATTCTGTAGAAGGATGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381440.5
3UTR CAA 72 bp GAATGCCACGATGATAACACTGAACTTGTTTCCCTCTaGAAGGACATTGGAAATGTTACCGAGGTTCATTTT +
Preference number: 4 (lower is better)
Translates to: ECHDDNTELVSL*KDIGNVTEVHF
Trigger: AAAATGAACCTCGGTAACATTTCCAATGTCCTTCAAGAGGGAAACAAGTTCAGTGTTATCATCGTGGCATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR TCA 90 bp CCACATCCTTCTACAGAATCCGTCTACACAGAACAATATTTGAACCAATTCTTGACACAGAACAATATTTaGACCAATTCTTGGGTCTCC +
Preference number: 4 (lower is better)
Translates to: PHPSTESVYTEQYLNQFLTQNNI*TNSWVS
Trigger: GGAGACCCAAGAATTGGTTCAAATATTGTTCTGTGT...CAAGAATTGGTTCAAATATTGTTCTGTGTAGACGGATTCTGTAGAAGGATGTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381440.5
3UTR CAA 72 bp TTTCTATCTTTGCATAAAGTTAGCAGACTGACTTCTTaGCACAATGCAGTACCTTATGACCCAACATTGACC +
Preference number: 4 (lower is better)
Translates to: FLSLHKVSRLTS*HNAVPYDPTLT
Trigger: GGTCAATGTTGGGTCATAAGGTACTGCATTGTGCAAAGAAGTCAGTCTGCTAACTTTATGCAAAGATAGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS GCA 90 bp CGGGCGCGGCCAGCCCGCACCAGCTCGCCCACGATCCGGCTCACGTaGGCCTTGCTGTGGCCCAACACGTGCGGAGACAGGCGCACCTCA +
Preference number: 5 (lower is better)
Translates to: RARPARTSSPTIRLT*ALLWPNTCGDRRTS
Trigger: TGAGGTGCGCCTGTCTCCGCACGTGTTGGGCCACAGCAAGGCGCACGTGAGCCGGATCGTGGGCGAGCTGGTGCGGGCTGGCCGCGCCCG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381440.5
ENST00000566735.1
CDS GCA 90 bp GGCCAGCCCGCACCAGCTCGCCCACGATCCGGCTCACGTGCGCCTTaGTGTGGCCCAACACGTGCGGAGACAGGCGCACCTCATGCTCGT +
Preference number: 5 (lower is better)
Translates to: GQPAPARPRSGSRAP*CGPTRAETGAPHAR
Trigger: ACGAGCATGAGGTGCGCCTGTCTCCGCACGTGTTGGGCCACAGCAAGGCGCACGTGAGCCGGATCGTGGGCGAGCTGGTGCGGGCTGGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381440.5
ENST00000566735.1
CDS TCA 90 bp ATGCTGAGGCCCGGCTCTCGGAAGTGTCTCGAGGAGAAGGCGGCGTaGCCCTCCAGACGGGGAGACCCGGGCAGGAAGCGCTGCCGGACA +
Preference number: 5 (lower is better)
Translates to: MLRPGSRKCLEEKAA*PSRRGDPGRKRCRT
Trigger: TGTCCGGCAGCGCTTCCTGCCCGGGTCTCCCCGTCTGGAGGGTCACGCCGCCTTCTCCTCGAGACACTTCCGAGAGCCGGGCCTCAGCAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381440.5
ENST00000566735.1
CDS GCA 90 bp CCGGAGAAGCTGGGGCAGCCTTTGCCACGTGGACAGCAACCGCGCTaGTGCAAGTTCCCGGGCGTGCCCGTCGAAAGCGGCCAGGAGGTC +
Preference number: 5 (lower is better)
Translates to: PEKLGQPLPRGQQPR*CKFPGVPVESGQEV
Trigger: GACCTCCTGGCCGCTTTCGACGGGCACGCCCGGGAACTTGCAGCAGCGCGGTTGCTGTCCACGTGGCAAAGGCTGCCCCAGCTTCTCCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381440.5
ENST00000566735.1
CDS CCA 90 bp ACGCAGGCCCTCAGGGAGCTCCAACAGGGGCGCGCTGGGCAAGGGTaGCGGTGGTGGCGCCACAAGGAAGACCCCATCTCCCAGATGGAC +
Preference number: 5 (lower is better)
Translates to: TQALRELQQGRAGQG*RWWRHKEDPISQMD
Trigger: GTCCATCTGGGAGATGGGGTCTTCCTTGTGGCGCCACCACCGCCACCCTTGCCCAGCGCGCCCCTGTTGGAGCTCCCTGAGGGCCTGCGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381440.5
ENST00000566735.1
CDS CCA 90 bp AGGGGACCCACCTCGGCAGCCGCCCCACCAGGGCCCAGGACGCAGTaGAAGAGCGTATGGCGTCGCAGCAGGCAGTCCCTAAGGAACTGC +
Preference number: 5 (lower is better)
Translates to: RGPTSAAAPPGPRTQ*KSVWRRSRQSLRNC
Trigger: GCAGTTCCTTAGGGACTGCCTGCTGCGACGCCATACGCTCTTCCACTGCGTCCTGGGCCCTGGTGGGGCGGCTGCCGAGGTGGGTCCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381440.5
ENST00000566735.1
CDS GCA 90 bp CTTTGCCACGTGGACAGCAACCGCGCTGCTGCAAGTTCCCGGGCGTaGCCGTCGAAAGCGGCCAGGAGGTCAACTGGGGCGGCTTCCCTC +
Preference number: 5 (lower is better)
Translates to: LCHVDSNRAAASSRA*PSKAARRSTGAASL
Trigger: GAGGGAAGCCGCCCCAGTTGACCTCCTGGCCGCTTTCGACGGGCACGCCCGGGAACTTGCAGCAGCGCGGTTGCTGTCCACGTGGCAAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381440.5
ENST00000566735.1
CDS GCA 90 bp GAGAAGCTGGGGCAGCCTTTGCCACGTGGACAGCAACCGCGCTGCTaGAAGTTCCCGGGCGTGCCCGTCGAAAGCGGCCAGGAGGTCAAC +
Preference number: 5 (lower is better)
Translates to: EKLGQPLPRGQQPRC*KFPGVPVESGQEVN
Trigger: GTTGACCTCCTGGCCGCTTTCGACGGGCACGCCCGGGAACTTGCAGCAGCGCGGTTGCTGTCCACGTGGCAAAGGCTGCCCCAGCTTCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381440.5
ENST00000566735.1
CDS CCA 90 bp CCTGGAGCTGCCCGTTCCTGCAGCCAACTCAGCAGCTTCTGCTCCTaGCGTGCTGTGTTCACACCCCACAGTGCCTCCGCACGCAGGCCC +
Preference number: 5 (lower is better)
Translates to: PGAARSCSQLSSFCS*RAVFTPHSASARRP
Trigger: GGGCCTGCGTGCGGAGGCACTGTGGGGTGTGAACACAGCACGCCAGGAGCAGAAGCTGCTGAGTTGGCTGCAGGAACGGGCAGCTCCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381440.5
ENST00000566735.1
CDS GCA 90 bp AGCTGCCCGTTCCTGCAGCCAACTCAGCAGCTTCTGCTCCTGGCGTaGTGTGTTCACACCCCACAGTGCCTCCGCACGCAGGCCCTCAGG +
Preference number: 5 (lower is better)
Translates to: SCPFLQPTQQLLLLA*CVHTPQCLRTQALR
Trigger: CCTGAGGGCCTGCGTGCGGAGGCACTGTGGGGTGTGAACACAGCACGCCAGGAGCAGAAGCTGCTGAGTTGGCTGCAGGAACGGGCAGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381440.5
ENST00000566735.1
CDS TCA 90 bp GAGACAGGCGCACCTCATGCTCGTAGTAACTCTCCAGCAGGATGCTaGGGCCCGGCTCTCGGAAGTGTCTCGAGGAGAAGGCGGCGTGAC +
Preference number: 5 (lower is better)
Translates to: ETGAPHARSNSPAGC*GPALGSVSRRRRRD
Trigger: GTCACGCCGCCTTCTCCTCGAGACACTTCCGAGAGCCGGGCCTCAGCATCCTGCTGGAGAGTTACTACGAGCATGAGGTGCGCCTGTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381440.5
ENST00000566735.1
CDS TCA 90 bp TGCAGATGCGACTGGAACCAGCGCAGCACCAGAGTAGCAGAGAGGTaGCGCCGCCCGCGCACATCCACGCAGAAGGCATCAGCAAAGGGT +
Preference number: 5 (lower is better)
Translates to: CRCDWNQRSTRVAER*RRPRTSTQKASAKG
Trigger: ACCCTTTGCTGATGCCTTCTGCGTGGATGTGCGCGGGCGGCGTCACCTCTCTGCTACTCTGGTGCTGCGCTGGTTCCAGTCGCATCTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381440.5
ENST00000566735.1
CDS GCA 90 bp AGCCTTAAGCAACTGCAGGCACTTGAGGTAGCAGGCACCTGGAGCTaGCCGTTCCTGCAGCCAACTCAGCAGCTTCTGCTCCTGGCGTGC +
Preference number: 5 (lower is better)
Translates to: SLKQLQALEVAGTWS*PFLQPTQQLLLLAC
Trigger: GCACGCCAGGAGCAGAAGCTGCTGAGTTGGCTGCAGGAACGGGCAGCTCCAGGTGCCTGCTACCTCAAGTGCCTGCAGTTGCTTAAGGCT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381440.5
ENST00000566735.1
CDS CCA 90 bp GCGCAGAGCCTTAAGCAACTGCAGGCACTTGAGGTAGCAGGCACCTaGAGCTGCCCGTTCCTGCAGCCAACTCAGCAGCTTCTGCTCCTG +
Preference number: 5 (lower is better)
Translates to: AQSLKQLQALEVAGT*SCPFLQPTQQLLLL
Trigger: CAGGAGCAGAAGCTGCTGAGTTGGCTGCAGGAACGGGCAGCTCCAGGTGCCTGCTACCTCAAGTGCCTGCAGTTGCTTAAGGCTCTGCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381440.5
ENST00000566735.1
CDS-3UTR CAA 90 bp CCCAGCTTGTGGCCTGCGGCGATGTTAGTTAGGCAAGCATGCTGGCTGCTTTTCAAGCTGGGGCAGCCTTaGCCACGTGGACAGCAACCG +
Preference number: 5 (lower is better)
Translates to: PSLWPAAMLVRQACWLLFKLGQP*PRGQQP
Trigger: CGGTTGCTGTCCACGTGGCAAAGGCTGCCCCAGCTT...GAAAAGCAGCCAGCATGCTTGCCTAACTAACATCGCCGCAGGCCACAAGCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS CCA 90 bp CCGCCATTCCCACCCCCACCCAGTGGGAAAGGCTTTAGGAGCATTTaGTCAGGTGGGGGTGCTGTCAGGGTTTACGGTTCACCTTCAAGG +
Preference number: 5 (lower is better)
Translates to: PPFPPPPSGKGFRSI*SGGGAVRVYGSPSR
Trigger: CCTTGAAGGTGAACCGTAAACCCTGACAGCACCCCCACCTGACCAAATGCTCCTAAAGCCTTTCCCACTGGGTGGGGGTGGGAATGGCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000381440.5
ENST00000566735.1
CDS-3UTR CAA 90 bp CCCAGCTTGTGGCCTGCGGCGATGTTAGTTAGGCAAGCATGCTGGCTGCTTTTCGCATCAGCAAAGGGTTaGCAGTCCCGAAGCCAGTGG +
Preference number: 5 (lower is better)
Translates to: PSLWPAAMLVRQACWLLFASAKG*QSRSQW
Trigger: CCACTGGCTTCGGGACTGCAAACCCTTTGCTGATGC...GAAAAGCAGCCAGCATGCTTGCCTAACTAACATCGCCGCAGGCCACAAGCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR CAA 90 bp TGTTTCCTAACCCAAACCTCTCTCACACCCTCACGCCATTTTCACTTCATTTCCGCTTCCCTCAGTGCCTaGGGCAGGGGACCCACCTCG +
Preference number: 5 (lower is better)
Translates to: CFLTQTSLTPSRHFHFISASLSA*GRGPTS
Trigger: CGAGGTGGGTCCCCTGCCCAAGGCACTGAGGGAAGC...GGAAATGAAGTGAAAATGGCGTGAGGGTGTGAGAGAGGTTTGGGTTAGGAAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR CAA 90 bp TTGTGGCCTGCGGCGATGTTAGTTAGGCAAGCATGCTGGCTGCTTTTCAAGGTTAGCCAGCAGCCAGCCTaGGAGAAACACCTTTACAGG +
Preference number: 5 (lower is better)
Translates to: LWPAAMLVRQACWLLFKVSQQPA*EKHLYR
Trigger: CCTGTAAAGGTGTTTCTCCAAGGCTGGCTGCTGGCT...AACCTTGAAAAGCAGCCAGCATGCTTGCCTAACTAACATCGCCGCAGGCCACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR CAA 90 bp GAAGGCTCCCAAGACTGGTCAGTGGGAGTTACCAAAGGGTGTCTCGCCACAAAATGCAGTGGTGTGATCTaGGCTCTCTGCAACCTTCAC +
Preference number: 5 (lower is better)
Translates to: EGSQDWSVGVTKGCLATKCSGVI*ALCNLH
Trigger: GTGAAGGTTGCAGAGAGCCAAGATCACACCACTGCA...TTTTGTGGCGAGACACCCTTTGGTAACTCCCACTGACCAGTCTTGGGAGCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR CAA 90 bp AAACTGGTGGCCCCCAGGCTCAAACAAATGTTTGGCCCACATGGTGTTTTGGACGCCAGCAGCACTGTCTaGAGCACATATGAGGATAGG +
Preference number: 5 (lower is better)
Translates to: KLVAPRLKQMFGPHGVLDASSTV*STYEDR
Trigger: CCTATCCTCATATGTGCTCAAGACAGTGCTGCTGGC...GTCCAAAACACCATGTGGGCCAAACATTTGTTTGAGCCTGGGGGCCACCAGTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR CAA 90 bp ATTGTAGCAGCTGAACCATATCTGATTAACTCTTTGGTCTCTGTTATTGGAACATGCCCAGGGGCCCCCTaGCGCAGCAGCACTGCCAGC +
Preference number: 5 (lower is better)
Translates to: IVAAEPYLINSLVSVIGTCPGAP*RSSTAS
Trigger: GCTGGCAGTGCTGCTGCGCAAGGGGGCCCCTGGGCA...TGTTCCAATAACAGAGACCAAAGAGTTAATCAGATATGGTTCAGCTGCTACAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR CAA 90 bp CCACATCCTTCTACAGAATCCGTCTACACAGAACAATATTTGAACCAATTCTTGCGGCTCACGTGCGCCTaGCTGTGGCCCAACACGTGC +
Preference number: 5 (lower is better)
Translates to: PHPSTESVYTEQYLNQFLRLTCA*LWPNTC
Trigger: GCACGTGTTGGGCCACAGCAAGGCGCACGTGAGCCG...CAAGAATTGGTTCAAATATTGTTCTGTGTAGACGGATTCTGTAGAAGGATGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR CAA 90 bp TTGTGGCCTGCGGCGATGTTAGTTAGGCAAGCATGCTGGCTGCTTTTCAAGGTTGAATCAACAGGTCTCTaGGACCACGTAAGACTGCCT +
Preference number: 5 (lower is better)
Translates to: LWPAAMLVRQACWLLFKVESTGL*DHVRLP
Trigger: AGGCAGTCTTACGTGGTCCAAGAGACCTGTTGATTC...AACCTTGAAAAGCAGCCAGCATGCTTGCCTAACTAACATCGCCGCAGGCCACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR CAA 90 bp TTGTGGCCTGCGGCGATGTTAGTTAGGCAAGCATGCTGGCTGCTTTTCAAGGTTGCTAGGATGTCAATTTaGGTGGAGCTGCTGAGTCAG +
Preference number: 5 (lower is better)
Translates to: LWPAAMLVRQACWLLFKVARMSI*VELLSQ
Trigger: CTGACTCAGCAGCTCCACCAAAATTGACATCCTAGC...AACCTTGAAAAGCAGCCAGCATGCTTGCCTAACTAACATCGCCGCAGGCCACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR CAA 90 bp CCTTCTGATTACTCATCTGCAAACTCCGACAGAGCAAAGAAGTTTACCCCAAATCCGGCGGATTTTATGTaGCTCGTAGGCGCTGCCCAC +
Preference number: 5 (lower is better)
Translates to: PSDYSSANSDRAKKFTPNPADFM*LVGAAH
Trigger: GTGGGCAGCGCCTACGAGCAACATAAAATCCGCCGG...ATTTGGGGTAAACTTCTTTGCTCTGTCGGAGTTTGCAGATGAGTAATCAGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR CAA 90 bp CCCAGCTTGTGGCCTGCGGCGATGTTAGTTAGGCAAGCATGCTGGCTGCTTTTCGTGCAGTTTCTATCTTaGCATAAAGTTAGCAGACTG +
Preference number: 5 (lower is better)
Translates to: PSLWPAAMLVRQACWLLFVQFLS*HKVSRL
Trigger: CAGTCTGCTAACTTTATGCAAAGATAGAAACTGCAC...GAAAAGCAGCCAGCATGCTTGCCTAACTAACATCGCCGCAGGCCACAAGCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR CAA 90 bp CCCAGCTTGTGGCCTGCGGCGATGTTAGTTAGGCAAGCATGCTGGCTGCTTTTCATGTACAGAGAACAATaGCTCAGCATGGCATTTAAA +
Preference number: 5 (lower is better)
Translates to: PSLWPAAMLVRQACWLLFMYREQ*LSMAFK
Trigger: TTTAAATGCCATGCTGAGCAATTGTTCTCTGTACAT...GAAAAGCAGCCAGCATGCTTGCCTAACTAACATCGCCGCAGGCCACAAGCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR CAA 90 bp TTGTGGCCTGCGGCGATGTTAGTTAGGCAAGCATGCTGGCTGCTTTTCAAGGTTGTTTGCGACCCCTGGTaGGAAATAGCACTAAAAACA +
Preference number: 5 (lower is better)
Translates to: LWPAAMLVRQACWLLFKVVCDPW*EIALKT
Trigger: TGTTTTTAGTGCTATTTCCAACCAGGGGTCGCAAAC...AACCTTGAAAAGCAGCCAGCATGCTTGCCTAACTAACATCGCCGCAGGCCACAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR CAA 90 bp ATTGTAGCAGCTGAACCATATCTGATTAACTCTTTGGTCTCTGTTATTGGAACAGGTGAGGGTGGTGCCTaGAGGGCGCACAAGAAGCAG +
Preference number: 5 (lower is better)
Translates to: IVAAEPYLINSLVSVIGTGEGGA*RAHKKQ
Trigger: CTGCTTCTTGTGCGCCCTCAAGGCACCACCCTCACC...TGTTCCAATAACAGAGACCAAAGAGTTAATCAGATATGGTTCAGCTGCTACAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR CAA 90 bp GAAGGCTCCCAAGACTGGTCAGTGGGAGTTACCAAAGGGTGTCTCGCCACAAAATTTAATGAATGGATGTaGACGGACAGGTACATATCC +
Preference number: 5 (lower is better)
Translates to: EGSQDWSVGVTKGCLATKFNEWM*TDRYIS
Trigger: GGATATGTACCTGTCCGTCAACATCCATTCATTAAA...TTTTGTGGCGAGACACCCTTTGGTAACTCCCACTGACCAGTCTTGGGAGCCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR CAA 90 bp TGTTTCCTAACCCAAACCTCTCTCACACCCTCACGCCATTTTCACTTCATTTCCTGCTCTTTTCCTAATTaGTCTCCTCTGCCCACGACC +
Preference number: 5 (lower is better)
Translates to: CFLTQTSLTPSRHFHFISCSFPN*SPLPTT
Trigger: GGTCGTGGGCAGAGGAGACAAATTAGGAAAAGAGCA...GGAAATGAAGTGAAAATGGCGTGAGGGTGTGAGAGAGGTTTGGGTTAGGAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR CAA 90 bp AAACTGGTGGCCCCCAGGCTCAAACAAATGTTTGGCCCACATGGTGTTTTGGACAGCAGACTGACTTCTTaGCACAATGCAGTACCTTAT +
Preference number: 5 (lower is better)
Translates to: KLVAPRLKQMFGPHGVLDSRLTS*HNAVPY
Trigger: ATAAGGTACTGCATTGTGCAAAGAAGTCAGTCTGCT...GTCCAAAACACCATGTGGGCCAAACATTTGTTTGAGCCTGGGGGCCACCAGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR CAA 90 bp TTAACTGTCTTGGGCAACCATCATGCCTGGCTAATATGCCATATTATTTCCGTTGGTACATATCCCAGCTaGTGGCCTGCGGCGATGTTA +
Preference number: 5 (lower is better)
Translates to: LTVLGNHHAWLICHIISVGTYPS*WPAAML
Trigger: TAACATCGCCGCAGGCCACAAGCTGGGATATGTACC...AACGGAAATAATATGGCATATTAGCCAGGCATGATGGTTGCCCAAGACAGTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR CAA 90 bp TGTTTCCTAACCCAAACCTCTCTCACACCCTCACGCCATTTTCACTTCATTTCCTCCTTCCCCAGGTCTTaGGATTTCTCTTGGTTCACT +
Preference number: 5 (lower is better)
Translates to: CFLTQTSLTPSRHFHFISSFPRS*DFSWFT
Trigger: AGTGAACCAAGAGAAATCCAAAGACCTGGGGAAGGA...GGAAATGAAGTGAAAATGGCGTGAGGGTGTGAGAGAGGTTTGGGTTAGGAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR CAA 90 bp TTGTGGCCTGCGGCGATGTTAGTTAGGCAAGCATGCTGGCTGCTTTTCAAGGTTTTCACCAGTGTTGTCTaGAATATGTATTTGGTTGCT +
Preference number: 5 (lower is better)
Translates to: LWPAAMLVRQACWLLFKVFTSVV*NMYLVA
Trigger: AGCAACCAAATACATATTCAAGACAACACTGGTGAA...AACCTTGAAAAGCAGCCAGCATGCTTGCCTAACTAACATCGCCGCAGGCCACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR CAA 90 bp AAACTGGTGGCCCCCAGGCTCAAACAAATGTTTGGCCCACATGGTGTTTTGGACAACCAAAAACACAGTTaGGGGTCAGAAGACATTAAA +
Preference number: 5 (lower is better)
Translates to: KLVAPRLKQMFGPHGVLDNQKHS*GSEDIK
Trigger: TTTAATGTCTTCTGACCCCAAACTGTGTTTTTGGTT...GTCCAAAACACCATGTGGGCCAAACATTTGTTTGAGCCTGGGGGCCACCAGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR CAA 90 bp CCTTCTGATTACTCATCTGCAAACTCCGACAGAGCAAAGAAGTTTACCCCAAATCTAACCAACTCTCGATaGCCTTTCCATCTATGTGAC +
Preference number: 5 (lower is better)
Translates to: PSDYSSANSDRAKKFTPNLTNSR*PFHLCD
Trigger: GTCACATAGATGGAAAGGCAATCGAGAGTTGGTTAG...ATTTGGGGTAAACTTCTTTGCTCTGTCGGAGTTTGCAGATGAGTAATCAGAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR CAA 90 bp CCACATCCTTCTACAGAATCCGTCTACACAGAACAATATTTGAACCAATTCTTGATGAGCCTAAGAAGCTaGCACCCCAAATCTAGCCAC +
Preference number: 5 (lower is better)
Translates to: PHPSTESVYTEQYLNQFLMSLRS*HPKSSH
Trigger: GTGGCTAGATTTGGGGTGCAAGCTTCTTAGGCTCAT...CAAGAATTGGTTCAAATATTGTTCTGTGTAGACGGATTCTGTAGAAGGATGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR CAA 90 bp TGTTTCCTAACCCAAACCTCTCTCACACCCTCACGCCATTTTCACTTCATTTCCGAACTTGTTTCCCTCTaGAAGGACATTGGAAATGTT +
Preference number: 5 (lower is better)
Translates to: CFLTQTSLTPSRHFHFISELVSL*KDIGNV
Trigger: AACATTTCCAATGTCCTTCAAGAGGGAAACAAGTTC...GGAAATGAAGTGAAAATGGCGTGAGGGTGTGAGAGAGGTTTGGGTTAGGAAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR CAA 90 bp CCTTCTGATTACTCATCTGCAAACTCCGACAGAGCAAAGAAGTTTACCCCAAATCCTTATGACCCAACATaGACCTCAAAAGCTAGGAAT +
Preference number: 5 (lower is better)
Translates to: PSDYSSANSDRAKKFTPNPYDPT*TSKARN
Trigger: ATTCCTAGCTTTTGAGGTCAATGTTGGGTCATAAGG...ATTTGGGGTAAACTTCTTTGCTCTGTCGGAGTTTGCAGATGAGTAATCAGAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR CAA 90 bp ATTGTAGCAGCTGAACCATATCTGATTAACTCTTTGGTCTCTGTTATTGGAACATTCTTGGGTCTCCTGTaGGATGTCTTCCCATGGTTT +
Preference number: 5 (lower is better)
Translates to: IVAAEPYLINSLVSVIGTFLGLL*DVFPWF
Trigger: AAACCATGGGAAGACATCCAACAGGAGACCCAAGAA...TGTTCCAATAACAGAGACCAAAGAGTTAATCAGATATGGTTCAGCTGCTACAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR CAA 90 bp CCACATCCTTCTACAGAATCCGTCTACACAGAACAATATTTGAACCAATTCTTGCTTAATTTAACTGTCTaGGGCAACCATCATGCCTGG +
Preference number: 5 (lower is better)
Translates to: PHPSTESVYTEQYLNQFLLNLTV*GNHHAW
Trigger: CCAGGCATGATGGTTGCCCAAGACAGTTAAATTAAG...CAAGAATTGGTTCAAATATTGTTCTGTGTAGACGGATTCTGTAGAAGGATGTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR CAA 90 bp ATTGTAGCAGCTGAACCATATCTGATTAACTCTTTGGTCTCTGTTATTGGAACAATGCCTTCTGCAATCTaGCATTTAACTGGCTTCACC +
Preference number: 5 (lower is better)
Translates to: IVAAEPYLINSLVSVIGTMPSAI*HLTGFT
Trigger: GGTGAAGCCAGTTAAATGCAAGATTGCAGAAGGCAT...TGTTCCAATAACAGAGACCAAAGAGTTAATCAGATATGGTTCAGCTGCTACAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR CAA 90 bp CCACATCCTTCTACAGAATCCGTCTACACAGAACAATATTTGAACCAATTCTTGGTCTTTGGATTTCTCTaGGTTCACTCGAATTCTCCT +
Preference number: 5 (lower is better)
Translates to: PHPSTESVYTEQYLNQFLVFGFL*VHSNSP
Trigger: AGGAGAATTCGAGTGAACCAAGAGAAATCCAAAGAC...CAAGAATTGGTTCAAATATTGTTCTGTGTAGACGGATTCTGTAGAAGGATGTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR CAA 90 bp ATTGTAGCAGCTGAACCATATCTGATTAACTCTTTGGTCTCTGTTATTGGAACATATTTGAACCAATTCTaGGGTCTCCTGTTGGATGTC +
Preference number: 5 (lower is better)
Translates to: IVAAEPYLINSLVSVIGTYLNQF*GLLLDV
Trigger: GACATCCAACAGGAGACCCAAGAATTGGTTCAAATA...TGTTCCAATAACAGAGACCAAAGAGTTAATCAGATATGGTTCAGCTGCTACAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR CAA 90 bp ATTGTAGCAGCTGAACCATATCTGATTAACTCTTTGGTCTCTGTTATTGGAACATTTCAGATGCAATGCTaGGTGCTAGCAATTACCACA +
Preference number: 5 (lower is better)
Translates to: IVAAEPYLINSLVSVIGTFQMQC*VLAITT
Trigger: TGTGGTAATTGCTAGCACCAAGCATTGCATCTGAAA...TGTTCCAATAACAGAGACCAAAGAGTTAATCAGATATGGTTCAGCTGCTACAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS-3UTR CAA 90 bp CCACATCCTTCTACAGAATCCGTCTACACAGAACAATATTTGAACCAATTCTTGGCCATATTATTTCCGTaGTACACAGTACATGTTTTG +
Preference number: 5 (lower is better)
Translates to: PHPSTESVYTEQYLNQFLAILFP*YTVHVL
Trigger: CAAAACATGTACTGTGTACAACGGAAATAATATGGC...CAAGAATTGGTTCAAATATTGTTCTGTGTAGACGGATTCTGTAGAAGGATGTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS CCA 72 bp GGCCGGGGCCAGCGCTGGCTCCTCGCCCAGGCTCCGTaGCTCCAGCGCCACAAGCGGCGGGAGGCGCAGTGG +
Preference number: 6 (lower is better)
Translates to: GRGQRWLLAQAP*LQRHKRREAQW
Trigger: CCACTGCGCCTCCCGCCGCTTGTGGCGCTGGAGCCACGGAGCCTGGGCGAGGAGCCAGCGCTGGCCCCGGCC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381440.5
ENST00000566735.1
CDS CCA 72 bp GGAGGAAATGCCGGAGTCTGGAGCCGAGCGTGGAGCTaGCGAGCCGGGTCGGCCCCCTCCCGGGCCTCCGCC +
Preference number: 6 (lower is better)
Translates to: GGNAGVWSRAWS*RAGSAPSRASA
Trigger: GGCGGAGGCCCGGGAGGGGGCCGACCCGGCTCGCCAGCTCCACGCTCGGCTCCAGACTCCGGCATTTCCTCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566735.1
CDS GCA 72 bp AGCGGCCAGGAGGTCAACTGGGGCGGCTTCCCTCAGTaGCTTGGGCAGGGGACCCACCTCGGCAGCCGCCCC +
Preference number: 6 (lower is better)
Translates to: SGQEVNWGGFPQ*LGQGTHLGSRP
Trigger: GGGGCGGCTGCCGAGGTGGGTCCCCTGCCCAAGGCACTGAGGGAAGCCGCCCCAGTTGACCTCCTGGCCGCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381440.5
ENST00000566735.1
CDS CAA 90 bp CGGCCAGCCCGCACCAGCTCGCCCACGATCCGGCTCACGTGCGCCTaGCTGTGGCCCAACACGTGCGGAGACAGGCGCACCTCATGCTCG +
Preference number: 6 (lower is better)
Translates to: RPARTSSPTIRLTCA*LWPNTCGDRRTSCS
Trigger: CGAGCATGAGGTGCGCCTGTCTCCGCACGTGTTGGGCCACAGCAAGGCGCACGTGAGCCGGATCGTGGGCGAGCTGGTGCGGGCTGGCCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381440.5
ENST00000566735.1
CDS TCA 72 bp CCCGGCTCTCGGAAGTGTCTCGAGGAGAAGGCGGCGTaGCCCTCCAGACGGGGAGACCCGGGCAGGAAGCGC +
Preference number: 6 (lower is better)
Translates to: PGSRKCLEEKAA*PSRRGDPGRKR
Trigger: GCGCTTCCTGCCCGGGTCTCCCCGTCTGGAGGGTCACGCCGCCTTCTCCTCGAGACACTTCCGAGAGCCGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381440.5
ENST00000566735.1
CDS GCA 72 bp CCAGCCCGCACCAGCTCGCCCACGATCCGGCTCACGTaGGCCTTGCTGTGGCCCAACACGTGCGGAGACAGG +
Preference number: 6 (lower is better)
Translates to: PARTSSPTIRLT*ALLWPNTCGDR
Trigger: CCTGTCTCCGCACGTGTTGGGCCACAGCAAGGCGCACGTGAGCCGGATCGTGGGCGAGCTGGTGCGGGCTGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381440.5
ENST00000566735.1
CDS CCA 72 bp CACGCAGGCCCTCAGGGAGCTCCAACAGGGGCGCGCTaGGCAAGGGTGGCGGTGGTGGCGCCACAAGGAAGA +
Preference number: 6 (lower is better)
Translates to: HAGPQGAPTGAR*ARVAVVAPQGR
Trigger: TCTTCCTTGTGGCGCCACCACCGCCACCCTTGCCCAGCGCGCCCCTGTTGGAGCTCCCTGAGGGCCTGCGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381440.5
ENST00000566735.1
CDS CAA 72 bp CGCACCAGCTCGCCCACGATCCGGCTCACGTGCGCCTaGCTGTGGCCCAACACGTGCGGAGACAGGCGCACC +
Preference number: 6 (lower is better)
Translates to: RTSSPTIRLTCA*LWPNTCGDRRT
Trigger: GGTGCGCCTGTCTCCGCACGTGTTGGGCCACAGCAAGGCGCACGTGAGCCGGATCGTGGGCGAGCTGGTGCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381440.5
ENST00000566735.1
CDS GCA 72 bp GCACCAGCTCGCCCACGATCCGGCTCACGTGCGCCTTaGTGTGGCCCAACACGTGCGGAGACAGGCGCACCT +
Preference number: 6 (lower is better)
Translates to: APARPRSGSRAP*CGPTRAETGAP
Trigger: AGGTGCGCCTGTCTCCGCACGTGTTGGGCCACAGCAAGGCGCACGTGAGCCGGATCGTGGGCGAGCTGGTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381440.5
ENST00000566735.1
CDS GCA 72 bp GTGGACAGCAACCGCGCTGCTGCAAGTTCCCGGGCGTaGCCGTCGAAAGCGGCCAGGAGGTCAACTGGGGCG +
Preference number: 6 (lower is better)
Translates to: VDSNRAAASSRA*PSKAARRSTGA
Trigger: CGCCCCAGTTGACCTCCTGGCCGCTTTCGACGGGCACGCCCGGGAACTTGCAGCAGCGCGGTTGCTGTCCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381440.5
ENST00000566735.1
CDS GCA 72 bp GGGCAGCCTTTGCCACGTGGACAGCAACCGCGCTGCTaGAAGTTCCCGGGCGTGCCCGTCGAAAGCGGCCAG +
Preference number: 6 (lower is better)
Translates to: GQPLPRGQQPRC*KFPGVPVESGQ
Trigger: CTGGCCGCTTTCGACGGGCACGCCCGGGAACTTGCAGCAGCGCGGTTGCTGTCCACGTGGCAAAGGCTGCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381440.5
ENST00000566735.1
CDS GCA 72 bp CTGGGGCAGCCTTTGCCACGTGGACAGCAACCGCGCTaGTGCAAGTTCCCGGGCGTGCCCGTCGAAAGCGGC +
Preference number: 6 (lower is better)
Translates to: LGQPLPRGQQPR*CKFPGVPVESG
Trigger: GCCGCTTTCGACGGGCACGCCCGGGAACTTGCAGCAGCGCGGTTGCTGTCCACGTGGCAAAGGCTGCCCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381440.5
ENST00000566735.1
CDS CCA 72 bp CTCAGGGAGCTCCAACAGGGGCGCGCTGGGCAAGGGTaGCGGTGGTGGCGCCACAAGGAAGACCCCATCTCC +
Preference number: 6 (lower is better)
Translates to: LRELQQGRAGQG*RWWRHKEDPIS
Trigger: GGAGATGGGGTCTTCCTTGTGGCGCCACCACCGCCACCCTTGCCCAGCGCGCCCCTGTTGGAGCTCCCTGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381440.5
ENST00000566735.1
CDS TCA 72 bp ACAGGCCGGTCACCAGGGGCCAGAAGACGCGTAGATTaGGGGTGTAGTGCACCGACATGCCGGGCGCCCGGG +
Preference number: 6 (lower is better)
Translates to: TGRSPGARRRVD*GCSAPTCRAPG
Trigger: CCCGGGCGCCCGGCATGTCGGTGCACTACACCCTCAATCTACGCGTCTTCTGGCCCCTGGTGACCGGCCTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381440.5
CDS CCA 72 bp AGCTCGCCCACGATCCGGCTCACGTGCGCCTTGCTGTaGCCCAACACGTGCGGAGACAGGCGCACCTCATGC +
Preference number: 6 (lower is better)
Translates to: SSPTIRLTCALL*PNTCGDRRTSC
Trigger: GCATGAGGTGCGCCTGTCTCCGCACGTGTTGGGCCACAGCAAGGCGCACGTGAGCCGGATCGTGGGCGAGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381440.5
ENST00000566735.1
CDS CCA 72 bp CTCCAACAGGGGCGCGCTGGGCAAGGGTGGCGGTGGTaGCGCCACAAGGAAGACCCCATCTCCCAGATGGAC +
Preference number: 6 (lower is better)
Translates to: LQQGRAGQGWRW*RHKEDPISQMD
Trigger: GTCCATCTGGGAGATGGGGTCTTCCTTGTGGCGCCACCACCGCCACCCTTGCCCAGCGCGCCCCTGTTGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381440.5
ENST00000566735.1
CDS CAA 72 bp AGGTGCTCCTCGTCCCAGCCTTGCCCAGGGGCCCCCTaGCGCAGCAGCACTGCCAGCAGCACTGTCTTGAGC +
Preference number: 6 (lower is better)
Translates to: RCSSSQPCPGAP*RSSTASSTVLS
Trigger: GCTCAAGACAGTGCTGCTGGCAGTGCTGCTGCGCAAGGGGGCCCCTGGGCAAGGCTGGGACGAGGAGCACCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381440.5
ENST00000566735.1
CDS CAA 72 bp GGGACCCCCGTAGGCCCGGAGAAGCTGGGGCAGCCTTaGCCACGTGGACAGCAACCGCGCTGCTGCAAGTTC +
Preference number: 6 (lower is better)
Translates to: GTPVGPEKLGQP*PRGQQPRCCKF
Trigger: GAACTTGCAGCAGCGCGGTTGCTGTCCACGTGGCAAAGGCTGCCCCAGCTTCTCCGGGCCTACGGGGGTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381440.5
ENST00000566735.1
CDS CCA 72 bp GCCCCACCAGGGCCCAGGACGCAGTGGAAGAGCGTATaGCGTCGCAGCAGGCAGTCCCTAAGGAACTGCACC +
Preference number: 6 (lower is better)
Translates to: APPGPRTQWKSV*RRSRQSLRNCT
Trigger: GGTGCAGTTCCTTAGGGACTGCCTGCTGCGACGCCATACGCTCTTCCACTGCGTCCTGGGCCCTGGTGGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381440.5
ENST00000566735.1
CDS TCA 72 bp GACTGGAACCAGCGCAGCACCAGAGTAGCAGAGAGGTaGCGCCGCCCGCGCACATCCACGCAGAAGGCATCA +
Preference number: 6 (lower is better)
Translates to: DWNQRSTRVAER*RRPRTSTQKAS
Trigger: TGATGCCTTCTGCGTGGATGTGCGCGGGCGGCGTCACCTCTCTGCTACTCTGGTGCTGCGCTGGTTCCAGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381440.5
ENST00000566735.1
CDS CCA 72 bp GCCCGTTCCTGCAGCCAACTCAGCAGCTTCTGCTCCTaGCGTGCTGTGTTCACACCCCACAGTGCCTCCGCA +
Preference number: 6 (lower is better)
Translates to: ARSCSQLSSFCS*RAVFTPHSASA
Trigger: TGCGGAGGCACTGTGGGGTGTGAACACAGCACGCCAGGAGCAGAAGCTGCTGAGTTGGCTGCAGGAACGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381440.5
ENST00000566735.1
CDS CAA 90 bp CAGTGGCACCAGCACGTCGAAGCTGTCGGGCCGGCGGATTTTATGTaGCTCGTAGGCGCTGCCCACCTGGATGAAGTCTCCGCGGAAGGC +
Preference number: 6 (lower is better)
Translates to: QWHQHVEAVGPADFM*LVGAAHLDEVSAEG
Trigger: GCCTTCCGCGGAGACTTCATCCAGGTGGGCAGCGCCTACGAGCAACATAAAATCCGCCGGCCCGACAGCTTCGACGTGCTGGTGCCACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381440.5
ENST00000566735.1
CDS TCA 72 bp GGATTTTATGTTGCTCGTAGGCGCTGCCCACCTGGATaGAGTCTCCGCGGAAGGCCAAGGCCAGCGCTCCCC +
Preference number: 6 (lower is better)
Translates to: GFYVARRRCPPG*SLRGRPRPALP
Trigger: GGGGAGCGCTGGCCTTGGCCTTCCGCGGAGACTTCATCCAGGTGGGCAGCGCCTACGAGCAACATAAAATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381440.5
ENST00000566735.1
CDS GCA 72 bp TTCCTGCAGCCAACTCAGCAGCTTCTGCTCCTGGCGTaGTGTGTTCACACCCCACAGTGCCTCCGCACGCAG +
Preference number: 6 (lower is better)
Translates to: FLQPTQQLLLLA*CVHTPQCLRTQ
Trigger: CTGCGTGCGGAGGCACTGTGGGGTGTGAACACAGCACGCCAGGAGCAGAAGCTGCTGAGTTGGCTGCAGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381440.5
ENST00000566735.1
CDS GCA 72 bp CAACTGCAGGCACTTGAGGTAGCAGGCACCTGGAGCTaGCCGTTCCTGCAGCCAACTCAGCAGCTTCTGCTC +
Preference number: 6 (lower is better)
Translates to: QLQALEVAGTWS*PFLQPTQQLLL
Trigger: GAGCAGAAGCTGCTGAGTTGGCTGCAGGAACGGGCAGCTCCAGGTGCCTGCTACCTCAAGTGCCTGCAGTTG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381440.5
ENST00000566735.1
CDS CAA 72 bp CAGCACGTCGAAGCTGTCGGGCCGGCGGATTTTATGTaGCTCGTAGGCGCTGCCCACCTGGATGAAGTCTCC +
Preference number: 6 (lower is better)
Translates to: QHVEAVGPADFM*LVGAAHLDEVS
Trigger: GGAGACTTCATCCAGGTGGGCAGCGCCTACGAGCAACATAAAATCCGCCGGCCCGACAGCTTCGACGTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381440.5
ENST00000566735.1
CDS CCA 72 bp CTTAAGCAACTGCAGGCACTTGAGGTAGCAGGCACCTaGAGCTGCCCGTTCCTGCAGCCAACTCAGCAGCTT +
Preference number: 6 (lower is better)
Translates to: LKQLQALEVAGT*SCPFLQPTQQL
Trigger: AAGCTGCTGAGTTGGCTGCAGGAACGGGCAGCTCCAGGTGCCTGCTACCTCAAGTGCCTGCAGTTGCTTAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381440.5
ENST00000566735.1